chrom chromStart chromEnd name geneNames ensemblIds hES_HUES1_p28.RRBS.methRatio hES_HUES1_p28.RRBS.cpgTotal hES_HUES1_p28.RRBS.cpgMinCoverage5 hES_HUES3_p27.RRBS.methRatio hES_HUES3_p27.RRBS.cpgTotal hES_HUES3_p27.RRBS.cpgMinCoverage5 hES_HUES6_p25.RRBS.methRatio hES_HUES6_p25.RRBS.cpgTotal hES_HUES6_p25.RRBS.cpgMinCoverage5 hES_HUES8_p30.RRBS.methRatio hES_HUES8_p30.RRBS.cpgTotal hES_HUES8_p30.RRBS.cpgMinCoverage5 hES_HUES9_p21.RRBS.methRatio hES_HUES9_p21.RRBS.cpgTotal hES_HUES9_p21.RRBS.cpgMinCoverage5 hES_HUES13_p47.RRBS.methRatio hES_HUES13_p47.RRBS.cpgTotal hES_HUES13_p47.RRBS.cpgMinCoverage5 hES_HUES28_p17.RRBS.methRatio hES_HUES28_p17.RRBS.cpgTotal hES_HUES28_p17.RRBS.cpgMinCoverage5 hES_HUES44_p18.RRBS.methRatio hES_HUES44_p18.RRBS.cpgTotal hES_HUES44_p18.RRBS.cpgMinCoverage5 hES_HUES45_p20.RRBS.methRatio hES_HUES45_p20.RRBS.cpgTotal hES_HUES45_p20.RRBS.cpgMinCoverage5 hES_HUES48_p19.RRBS.methRatio hES_HUES48_p19.RRBS.cpgTotal hES_HUES48_p19.RRBS.cpgMinCoverage5 hES_HUES49_p17.RRBS.methRatio hES_HUES49_p17.RRBS.cpgTotal hES_HUES49_p17.RRBS.cpgMinCoverage5 hES_HUES53_p17.RRBS.methRatio hES_HUES53_p17.RRBS.cpgTotal hES_HUES53_p17.RRBS.cpgMinCoverage5 hES_HUES62_p14.RRBS.methRatio hES_HUES62_p14.RRBS.cpgTotal hES_HUES62_p14.RRBS.cpgMinCoverage5 hES_HUES63_p19.RRBS.methRatio hES_HUES63_p19.RRBS.cpgTotal hES_HUES63_p19.RRBS.cpgMinCoverage5 hES_HUES64_p19.RRBS.methRatio hES_HUES64_p19.RRBS.cpgTotal hES_HUES64_p19.RRBS.cpgMinCoverage5 hES_HUES65_p19.RRBS.methRatio hES_HUES65_p19.RRBS.cpgTotal hES_HUES65_p19.RRBS.cpgMinCoverage5 hES_HUES66_p20.RRBS.methRatio hES_HUES66_p20.RRBS.cpgTotal hES_HUES66_p20.RRBS.cpgMinCoverage5 hES_H1_p37.RRBS.methRatio hES_H1_p37.RRBS.cpgTotal hES_H1_p37.RRBS.cpgMinCoverage5 hES_H7_p48.RRBS.methRatio hES_H7_p48.RRBS.cpgTotal hES_H7_p48.RRBS.cpgMinCoverage5 hES_H9_p58.RRBS.methRatio hES_H9_p58.RRBS.cpgTotal hES_H9_p58.RRBS.cpgMinCoverage5 hiPS_11a_p22.RRBS.methRatio hiPS_11a_p22.RRBS.cpgTotal hiPS_11a_p22.RRBS.cpgMinCoverage5 hiPS_11b_p13.RRBS.methRatio hiPS_11b_p13.RRBS.cpgTotal hiPS_11b_p13.RRBS.cpgMinCoverage5 hiPS_11c_p23.RRBS.methRatio hiPS_11c_p23.RRBS.cpgTotal hiPS_11c_p23.RRBS.cpgMinCoverage5 hiPS_15b_p27.RRBS.methRatio hiPS_15b_p27.RRBS.cpgTotal hiPS_15b_p27.RRBS.cpgMinCoverage5 hiPS_17a_p14.RRBS.methRatio hiPS_17a_p14.RRBS.cpgTotal hiPS_17a_p14.RRBS.cpgMinCoverage5 hiPS_17b_p32.RRBS.methRatio hiPS_17b_p32.RRBS.cpgTotal hiPS_17b_p32.RRBS.cpgMinCoverage5 hiPS_18a_p30.RRBS.methRatio hiPS_18a_p30.RRBS.cpgTotal hiPS_18a_p30.RRBS.cpgMinCoverage5 hiPS_18b_p27.RRBS.methRatio hiPS_18b_p27.RRBS.cpgTotal hiPS_18b_p27.RRBS.cpgMinCoverage5 hiPS_18c_p36.RRBS.methRatio hiPS_18c_p36.RRBS.cpgTotal hiPS_18c_p36.RRBS.cpgMinCoverage5 hiPS_20b_p43.RRBS.methRatio hiPS_20b_p43.RRBS.cpgTotal hiPS_20b_p43.RRBS.cpgMinCoverage5 hiPS_27b_p31.RRBS.methRatio hiPS_27b_p31.RRBS.cpgTotal hiPS_27b_p31.RRBS.cpgMinCoverage5 hiPS_27e_p32.RRBS.methRatio hiPS_27e_p32.RRBS.cpgTotal hiPS_27e_p32.RRBS.cpgMinCoverage5 hFib_11_p8.RRBS.methRatio hFib_11_p8.RRBS.cpgTotal hFib_11_p8.RRBS.cpgMinCoverage5 hFib_15_p7.RRBS.methRatio hFib_15_p7.RRBS.cpgTotal hFib_15_p7.RRBS.cpgMinCoverage5 hFib_17_p7.RRBS.methRatio hFib_17_p7.RRBS.cpgTotal hFib_17_p7.RRBS.cpgMinCoverage5 hFib_18_p7.RRBS.methRatio hFib_18_p7.RRBS.cpgTotal hFib_18_p7.RRBS.cpgMinCoverage5 hFib_20_p7.RRBS.methRatio hFib_20_p7.RRBS.cpgTotal hFib_20_p7.RRBS.cpgMinCoverage5 hFib_27_p7.RRBS.methRatio hFib_27_p7.RRBS.cpgTotal hFib_27_p7.RRBS.cpgMinCoverage5 hEB16d_HUES1_p29.RRBS.methRatio hEB16d_HUES1_p29.RRBS.cpgTotal hEB16d_HUES1_p29.RRBS.cpgMinCoverage5 hEB16d_HUES3_p22.RRBS.methRatio hEB16d_HUES3_p22.RRBS.cpgTotal hEB16d_HUES3_p22.RRBS.cpgMinCoverage5 hEB16d_HUES6_p30.RRBS.methRatio hEB16d_HUES6_p30.RRBS.cpgTotal hEB16d_HUES6_p30.RRBS.cpgMinCoverage5 hEB16d_HUES45_p21.RRBS.methRatio hEB16d_HUES45_p21.RRBS.cpgTotal hEB16d_HUES45_p21.RRBS.cpgMinCoverage5 hEB16d_H1_p38.RRBS.methRatio hEB16d_H1_p38.RRBS.cpgTotal hEB16d_H1_p38.RRBS.cpgMinCoverage5 shared_hES_HUES1_p28.RRBS shared_hES_HUES3_p27.RRBS shared_hES_HUES6_p25.RRBS shared_hES_HUES8_p30.RRBS shared_hES_HUES9_p21.RRBS shared_hES_HUES13_p47.RRBS shared_hES_HUES28_p17.RRBS shared_hES_HUES44_p18.RRBS shared_hES_HUES45_p20.RRBS shared_hES_HUES48_p19.RRBS shared_hES_HUES49_p17.RRBS shared_hES_HUES53_p17.RRBS shared_hES_HUES62_p14.RRBS shared_hES_HUES63_p19.RRBS shared_hES_HUES64_p19.RRBS shared_hES_HUES65_p19.RRBS shared_hES_HUES66_p20.RRBS shared_hES_H1_p37.RRBS shared_hES_H7_p48.RRBS shared_hES_H9_p58.RRBS shared_hiPS_11a_p22.RRBS shared_hiPS_11b_p13.RRBS shared_hiPS_11c_p23.RRBS shared_hiPS_15b_p27.RRBS shared_hiPS_17a_p14.RRBS shared_hiPS_17b_p32.RRBS shared_hiPS_18a_p30.RRBS shared_hiPS_18b_p27.RRBS shared_hiPS_18c_p36.RRBS shared_hiPS_20b_p43.RRBS shared_hiPS_27b_p31.RRBS shared_hiPS_27e_p32.RRBS shared_hFib_11_p8.RRBS shared_hFib_15_p7.RRBS shared_hFib_17_p7.RRBS shared_hFib_18_p7.RRBS shared_hFib_20_p7.RRBS shared_hFib_27_p7.RRBS shared_hEB16d_HUES1_p29.RRBS shared_hEB16d_HUES3_p22.RRBS shared_hEB16d_HUES6_p30.RRBS shared_hEB16d_HUES45_p21.RRBS shared_hEB16d_H1_p38.RRBS shared_cpgMinCoverage5 sample1Methylation_weightedPos_-_hES_vs_hiPS sample2Methylation_weightedPos_-_hES_vs_hiPS methDiff_weightedPos_-_hES_vs_hiPS rrbsMinCoverage_-_hES_vs_hiPS sample1Methylation_unweightedPos_-_hES_vs_hiPS sample2Methylation_unweightedPos_-_hES_vs_hiPS methDiff_unweightedPos_-_hES_vs_hiPS pValueGreater.ttest_-_hES_vs_hiPS pValueLess.ttest_-_hES_vs_hiPS pvalClass_byPos.ttest_-_hES_vs_hiPS qValueGreater.ttest_-_hES_vs_hiPS qValueLess.ttest_-_hES_vs_hiPS qvalClass_byPos.ttest_-_hES_vs_hiPS pValueGreater.wilcoxon_-_hES_vs_hiPS pValueLess.wilcoxon_-_hES_vs_hiPS pvalClass_byPos.wilcoxon_-_hES_vs_hiPS qValueGreater.wilcoxon_-_hES_vs_hiPS qValueLess.wilcoxon_-_hES_vs_hiPS qvalClass_byPos.wilcoxon_-_hES_vs_hiPS methDiff_-_hES_vs_hiPS pValue_-_hES_vs_hiPS pvalClass_-_hES_vs_hiPS qValue_-_hES_vs_hiPS_pi1 qvalClass_-_hES_vs_hiPS sample1Methylation_weightedPos_-_hES_vs_hFib sample2Methylation_weightedPos_-_hES_vs_hFib methDiff_weightedPos_-_hES_vs_hFib rrbsMinCoverage_-_hES_vs_hFib sample1Methylation_unweightedPos_-_hES_vs_hFib sample2Methylation_unweightedPos_-_hES_vs_hFib methDiff_unweightedPos_-_hES_vs_hFib pValueGreater.ttest_-_hES_vs_hFib pValueLess.ttest_-_hES_vs_hFib pvalClass_byPos.ttest_-_hES_vs_hFib qValueGreater.ttest_-_hES_vs_hFib qValueLess.ttest_-_hES_vs_hFib qvalClass_byPos.ttest_-_hES_vs_hFib pValueGreater.wilcoxon_-_hES_vs_hFib pValueLess.wilcoxon_-_hES_vs_hFib pvalClass_byPos.wilcoxon_-_hES_vs_hFib qValueGreater.wilcoxon_-_hES_vs_hFib qValueLess.wilcoxon_-_hES_vs_hFib qvalClass_byPos.wilcoxon_-_hES_vs_hFib methDiff_-_hES_vs_hFib pValue_-_hES_vs_hFib pvalClass_-_hES_vs_hFib qValue_-_hES_vs_hFib_pi1 qvalClass_-_hES_vs_hFib sample1Methylation_weightedPos_-_hES_vs_hEB16d sample2Methylation_weightedPos_-_hES_vs_hEB16d methDiff_weightedPos_-_hES_vs_hEB16d rrbsMinCoverage_-_hES_vs_hEB16d sample1Methylation_unweightedPos_-_hES_vs_hEB16d sample2Methylation_unweightedPos_-_hES_vs_hEB16d methDiff_unweightedPos_-_hES_vs_hEB16d pValueGreater.ttest_-_hES_vs_hEB16d pValueLess.ttest_-_hES_vs_hEB16d pvalClass_byPos.ttest_-_hES_vs_hEB16d qValueGreater.ttest_-_hES_vs_hEB16d qValueLess.ttest_-_hES_vs_hEB16d qvalClass_byPos.ttest_-_hES_vs_hEB16d pValueGreater.wilcoxon_-_hES_vs_hEB16d pValueLess.wilcoxon_-_hES_vs_hEB16d pvalClass_byPos.wilcoxon_-_hES_vs_hEB16d qValueGreater.wilcoxon_-_hES_vs_hEB16d qValueLess.wilcoxon_-_hES_vs_hEB16d qvalClass_byPos.wilcoxon_-_hES_vs_hEB16d methDiff_-_hES_vs_hEB16d pValue_-_hES_vs_hEB16d pvalClass_-_hES_vs_hEB16d qValue_-_hES_vs_hEB16d_pi1 qvalClass_-_hES_vs_hEB16d sample1Methylation_weightedPos_-_hiPS_vs_hFib sample2Methylation_weightedPos_-_hiPS_vs_hFib methDiff_weightedPos_-_hiPS_vs_hFib rrbsMinCoverage_-_hiPS_vs_hFib sample1Methylation_unweightedPos_-_hiPS_vs_hFib sample2Methylation_unweightedPos_-_hiPS_vs_hFib methDiff_unweightedPos_-_hiPS_vs_hFib pValueGreater.ttest_-_hiPS_vs_hFib pValueLess.ttest_-_hiPS_vs_hFib pvalClass_byPos.ttest_-_hiPS_vs_hFib qValueGreater.ttest_-_hiPS_vs_hFib qValueLess.ttest_-_hiPS_vs_hFib qvalClass_byPos.ttest_-_hiPS_vs_hFib pValueGreater.wilcoxon_-_hiPS_vs_hFib pValueLess.wilcoxon_-_hiPS_vs_hFib pvalClass_byPos.wilcoxon_-_hiPS_vs_hFib qValueGreater.wilcoxon_-_hiPS_vs_hFib qValueLess.wilcoxon_-_hiPS_vs_hFib qvalClass_byPos.wilcoxon_-_hiPS_vs_hFib methDiff_-_hiPS_vs_hFib pValue_-_hiPS_vs_hFib pvalClass_-_hiPS_vs_hFib qValue_-_hiPS_vs_hFib_pi1 qvalClass_-_hiPS_vs_hFib sample1Methylation_weightedPos_-_hiPS_vs_hEB16d sample2Methylation_weightedPos_-_hiPS_vs_hEB16d methDiff_weightedPos_-_hiPS_vs_hEB16d rrbsMinCoverage_-_hiPS_vs_hEB16d sample1Methylation_unweightedPos_-_hiPS_vs_hEB16d sample2Methylation_unweightedPos_-_hiPS_vs_hEB16d methDiff_unweightedPos_-_hiPS_vs_hEB16d pValueGreater.ttest_-_hiPS_vs_hEB16d pValueLess.ttest_-_hiPS_vs_hEB16d pvalClass_byPos.ttest_-_hiPS_vs_hEB16d qValueGreater.ttest_-_hiPS_vs_hEB16d qValueLess.ttest_-_hiPS_vs_hEB16d qvalClass_byPos.ttest_-_hiPS_vs_hEB16d pValueGreater.wilcoxon_-_hiPS_vs_hEB16d pValueLess.wilcoxon_-_hiPS_vs_hEB16d pvalClass_byPos.wilcoxon_-_hiPS_vs_hEB16d qValueGreater.wilcoxon_-_hiPS_vs_hEB16d qValueLess.wilcoxon_-_hiPS_vs_hEB16d qvalClass_byPos.wilcoxon_-_hiPS_vs_hEB16d methDiff_-_hiPS_vs_hEB16d pValue_-_hiPS_vs_hEB16d pvalClass_-_hiPS_vs_hEB16d qValue_-_hiPS_vs_hEB16d_pi1 qvalClass_-_hiPS_vs_hEB16d sample1Methylation_weightedPos_-_hFib_vs_hEB16d sample2Methylation_weightedPos_-_hFib_vs_hEB16d methDiff_weightedPos_-_hFib_vs_hEB16d rrbsMinCoverage_-_hFib_vs_hEB16d sample1Methylation_unweightedPos_-_hFib_vs_hEB16d sample2Methylation_unweightedPos_-_hFib_vs_hEB16d methDiff_unweightedPos_-_hFib_vs_hEB16d pValueGreater.ttest_-_hFib_vs_hEB16d pValueLess.ttest_-_hFib_vs_hEB16d pvalClass_byPos.ttest_-_hFib_vs_hEB16d qValueGreater.ttest_-_hFib_vs_hEB16d qValueLess.ttest_-_hFib_vs_hEB16d qvalClass_byPos.ttest_-_hFib_vs_hEB16d pValueGreater.wilcoxon_-_hFib_vs_hEB16d pValueLess.wilcoxon_-_hFib_vs_hEB16d pvalClass_byPos.wilcoxon_-_hFib_vs_hEB16d qValueGreater.wilcoxon_-_hFib_vs_hEB16d qValueLess.wilcoxon_-_hFib_vs_hEB16d qvalClass_byPos.wilcoxon_-_hFib_vs_hEB16d methDiff_-_hFib_vs_hEB16d pValue_-_hFib_vs_hEB16d pvalClass_-_hFib_vs_hEB16d qValue_-_hFib_vs_hEB16d_pi1 qvalClass_-_hFib_vs_hEB16d chr1 842650 843650 7 ENSG00000209354,ENSG00000221146 0.854750 254 6 0.6253623 96 7 0.601396 136 7 0.808813 237 6 0.777289 79 7 0.858322 258 6 0.6150541 145 7 0.833374 153 6 0.7725087 75 4 0.772894 61 4 0.816137 239 7 0.904808 57 7 0.744475 96 7 0.8634921 77 6 0.8418803 96 7 0.874660 68 5 0.9375000 17 2 0.741780 374 6 0.876447 198 7 0.723145 174 6 0.831890 84 7 0.6142857 19 1 0.642809 96 6 0.854159 79 4 0.871429 38 3 0.8474676 180 7 0.719176 78 6 0.747959 49 4 0.840670 193 7 0.6381511 186 7 0.8581339 197 7 0.902059 304 6 0.3971506 207 7 0.3527559 269 7 0.0000000 17 1 0.611111 14 1 0.3385769 185 7 0.2637542 373 7 0.505636 234 6 0.6108295 268 6 0.6544185 87 6 0.7522914 232 6 0.6042678 223 6 0.7952436 0.6776237 0.552032 0.793589 0.719963 0.819844 0.780483 0.7996975 0.7697733 0.840794 0.788372 0.8986737 0.741834 0.8350808 0.7053575 0.8780686 0.7829596 0.6962836 0.8696763 0.7137023 0.852839 0.5198276 0.692977 0.7483508 0.8244253 0.7936540 0.7430151 0.8128079 0.7617707 0.729386 0.8309638 0.8929074 0.3818009 0.2634358 0.36090612 0.4937136 0.5022417 0.3064910 0.5770944 0.6301445 0.6861402 0.7213062 0.6675890 2 0.771845 0.811045 -0.02949485 6 0.757308 0.744964 1.2344e-02 0.98083179 0.12092106 insignificant 1.00000 1.000000 insignificant 0.94066106 0.38855004 insignificant 1.00000 1.000000 insignificant 0.01152187 0.75585104 insignificant 1.00000 insignificant 0.771814 0.3727700 0.3864621 7 0.778706 0.2337152 0.5449913 7.6073e-33 9.9987e-01 hypermethylated 3.6225e-31 1.0000e+00 hypermethylated 5.1393e-09 9.9959e-01 hypermethylated 2.2345e-07 1.0000e+00 hypermethylated 0.4649796 1.7145e-03 weaklyHypermeth 3.2970e-02 weaklyHypermeth 0.771845 0.627395 0.09527899 6 0.757308 0.534312 0.2229959 2.9725e-06 9.3474e-01 weaklyHypermeth 1.6514e-04 1.0000e+00 weaklyHypermeth 1.3066e-03 9.9647e-01 weaklyHypermeth 8.6094e-02 1.0000e+00 weaklyHypermeth 0.1667158 8.9855e-03 weaklyHypermeth 2.1394e-01 insignificant 0.810793 0.3738230 0.41476542 6 0.713085 0.3213583 3.9173e-01 6.4460e-26 9.9918e-01 hypermethylated 2.9300e-24 1.0000e+00 hypermethylated 3.5544e-09 9.9992e-01 hypermethylated 1.7772e-07 1.0000e+00 hypermethylated 0.4534577 1.5865e-03 weaklyHypermeth 2.8846e-02 weaklyHypermeth 0.811045 0.627395 0.11354273 6 0.744964 0.534312 0.21065218 8.7761e-05 9.9311e-01 weaklyHypermeth 3.8157e-03 1.0000e+00 weaklyHypermeth 1.9969e-03 9.9859e-01 weaklyHypermeth 1.0440e-01 1.0000e+00 insignificant 0.1551939 1.2958e-02 weaklyHypermeth 0.32059312 insignificant 0.3738230 0.627996 -0.2620785 6 0.3213583 0.601101 -0.27974269 9.7685e-01 1.4331e-08 hypomethylated 1.0000e+00 5.1181e-07 hypomethylated 9.4069e-01 2.6070e-03 weaklyHypometh 1.0000e+00 4.1381e-02 weaklyHypometh -0.2982638 1.2646e-02 weaklyHypometh 0.16423442 insignificant chr1 1002090 1003090 9 ENSG00000217801 0.793998 530 11 0.5630684 233 10 0.489416 954 11 0.749083 371 11 0.654250 1030 14 0.734759 583 10 0.6447892 1029 16 0.666378 574 11 0.5334493 520 10 0.763355 287 10 0.723566 1338 11 0.676078 1031 10 0.465716 939 15 0.7464916 499 14 0.5662035 1154 16 0.727360 1267 12 0.6839771 268 6 0.731400 802 11 0.432736 1871 11 0.661145 487 10 0.556239 389 10 0.4881582 433 10 0.810086 314 12 0.603983 347 10 0.775520 335 10 0.6695357 460 12 0.701247 430 10 0.678580 539 11 0.653734 707 11 0.5727413 849 11 0.6417964 520 10 0.870347 509 10 0.7141616 137 7 0.6225582 651 10 0.7298750 614 8 0.605858 405 9 0.6164626 823 14 0.5815557 627 10 0.778044 639 11 0.7788471 575 11 0.7482859 159 7 0.7902815 593 10 0.7277710 449 11 0.7703598 0.7243043 0.478938 0.902170 0.650412 0.725222 0.674339 0.6411274 0.6944321 0.734540 0.641332 0.6919675 0.428064 0.7184060 0.5508549 0.6460480 0.6278400 0.6941521 0.5187437 0.7367536 0.699062 0.4711829 0.760055 0.6348116 0.7225820 0.6821892 0.7971263 0.6705669 0.6877882 0.496277 0.6003069 0.8308281 0.7672960 0.4338202 0.65953148 0.5516836 0.6031529 0.6402522 0.7602658 0.7824451 0.8457511 0.7015355 0.7317415 10 0.632080 0.671184 -0.02848840 11 0.536170 0.645557 -1.0939e-01 0.99870861 0.08703031 insignificant 1.00000 1.000000 insignificant 0.99908297 0.08567861 insignificant 1.00000 1.000000 insignificant -0.01813618 0.65178369 insignificant 1.00000 insignificant 0.632377 0.6323710 0.0386277 10 0.618404 0.6006476 0.0177563 6.8537e-02 6.3749e-01 insignificant 3.3270e-01 1.0000e+00 insignificant 3.3359e-01 7.2191e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0052825 8.8062e-01 insignificant 1.0000e+00 insignificant 0.632417 0.785507 -0.12320777 11 0.626737 0.859609 -0.2328721 1.0000e+00 1.8096e-08 weaklyHypometh 1.0000e+00 2.2620e-06 weaklyHypometh 1.0000e+00 2.3596e-05 weaklyHypometh 1.0000e+00 4.7192e-03 weaklyHypometh -0.1142848 2.5456e-04 weaklyHypometh 2.1213e-02 weaklyHypometh 0.671419 0.6321768 0.06570108 10 0.674288 0.5720454 1.0224e-01 3.6137e-03 9.5555e-01 weaklyHypermeth 2.3932e-02 1.0000e+00 weaklyHypermeth 2.0324e-01 9.9784e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0234187 5.7072e-01 insignificant 1.0000e+00 insignificant 0.671136 0.785507 -0.09743283 11 0.643002 0.859609 -0.21660738 1.0000e+00 1.5891e-05 weaklyHypometh 1.0000e+00 1.7657e-03 weaklyHypometh 1.0000e+00 2.3763e-02 weaklyHypometh 1.0000e+00 7.9210e-01 insignificant -0.0961486 1.3310e-02 weaklyHypometh 0.32059312 insignificant 0.6325653 0.785418 -0.1636997 10 0.6322607 0.852221 -0.21995982 1.0000e+00 3.1777e-05 weaklyHypometh 1.0000e+00 5.2093e-04 weaklyHypometh 1.0000e+00 2.6047e-02 weaklyHypometh 1.0000e+00 2.3465e-01 insignificant -0.1195673 3.4856e-03 weaklyHypometh 0.07203215 weaklyHypometh chr1 1133790 1134790 10 TNFRSF18 ENSG00000186891 0.837581 454 13 0.7352345 225 13 0.633176 472 17 0.863502 345 8 0.906481 295 16 0.696639 548 17 0.7018379 461 12 0.791528 318 13 0.6906902 264 15 0.801742 382 13 0.765528 543 16 0.663026 275 14 0.726612 388 13 0.8350790 196 8 0.7650202 458 14 0.659864 185 12 0.8477778 432 8 0.664975 596 12 0.790177 678 13 0.778948 326 14 0.609488 227 14 0.6556163 206 8 0.774338 296 13 0.713318 270 15 0.856239 432 8 0.8059811 356 13 0.715571 363 15 0.721292 160 12 0.811856 390 12 0.8520589 296 12 0.7889038 277 14 0.871439 491 15 0.5866858 282 15 0.5419404 479 15 0.6052883 272 9 0.123736 146 9 0.5285439 289 19 0.1391059 725 15 0.773620 385 13 0.8082335 457 13 0.6277292 175 9 0.7445321 655 14 0.7981443 270 11 0.9145317 0.8220816 0.736115 0.924126 0.926804 0.937885 0.888768 0.9243151 0.8766188 0.949301 0.935183 0.8832379 0.871611 0.9011026 0.8888426 0.9250788 0.9214180 0.7135028 0.9081059 0.9177138 0.849918 0.8227176 0.916538 0.8946827 0.9126223 0.8700849 0.8801017 0.9373444 0.9015912 0.846280 0.8595699 0.9435240 0.6180550 0.4238725 0.63531033 0.0923095 0.6417356 0.0918846 0.8775848 0.9192890 0.8766678 0.8818757 0.8877901 7 0.875526 0.870882 0.00212880 13 0.708628 0.693875 1.4753e-02 0.75755823 0.15822993 insignificant 1.00000 1.000000 insignificant 0.73308990 0.38110977 insignificant 1.00000 1.000000 insignificant -0.00690415 0.81683675 insignificant 1.00000 insignificant 0.875463 0.3912449 0.4811492 13 0.688534 0.3581342 0.3303996 2.3921e-55 9.9988e-01 hypermethylated 3.9869e-53 1.0000e+00 hypermethylated 1.7182e-13 9.9993e-01 hypermethylated 2.1477e-11 1.0000e+00 hypermethylated 0.3368875 1.3989e-02 weaklyHypermeth 1.6653e-01 insignificant 0.877365 0.878991 -0.00372979 13 0.695086 0.650087 0.0449993 5.2040e-01 6.6291e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.2060e-01 6.7795e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0073191 8.4889e-01 insignificant 1.0000e+00 insignificant 0.870538 0.3912449 0.49151815 13 0.672763 0.3581342 3.1463e-01 9.8551e-38 1.0000e+00 hypermethylated 1.2319e-35 1.0000e+00 hypermethylated 3.2807e-11 1.0000e+00 hypermethylated 3.5223e-09 1.0000e+00 hypermethylated 0.3437917 1.2389e-02 weaklyHypermeth 1.4007e-01 insignificant 0.873285 0.878991 -0.00552282 13 0.691745 0.650087 0.04165799 4.2746e-01 6.8623e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.9210e-01 7.7300e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0142233 7.3316e-01 insignificant 1.00000000 insignificant 0.3910640 0.878991 -0.4917872 13 0.2921402 0.650087 -0.35794636 9.9999e-01 1.0057e-16 hypomethylated 1.0000e+00 9.1428e-15 hypomethylated 1.0000e+00 1.4912e-06 hypomethylated 1.0000e+00 9.9415e-05 hypomethylated -0.3295684 1.4336e-02 weaklyHypometh 0.17699002 insignificant chr1 1679948 1680948 15 NADK ENSG00000008130 0.942042 571 16 0.8636599 391 16 0.785021 572 18 0.966550 696 16 0.877692 218 16 0.938979 679 16 0.9322258 243 16 0.966115 412 16 0.9602026 329 16 0.965216 575 14 0.869853 498 16 0.879568 262 14 0.968360 516 16 0.9722842 322 16 0.8834982 456 16 0.735504 133 10 0.9898990 56 8 0.919262 871 18 0.949697 336 16 0.862046 598 18 0.792976 190 9 0.8899984 273 14 0.891929 426 18 0.862137 279 14 0.815062 236 13 0.9487352 504 18 0.916077 339 13 0.776183 158 10 0.898803 472 16 0.9388530 525 18 0.9076786 518 18 0.950043 733 16 0.8733466 389 17 0.9105309 432 16 0.8529167 277 13 0.836756 129 9 0.7292560 173 16 0.9262419 554 18 0.892024 586 18 0.8426528 613 16 0.8469597 281 13 0.9116469 616 15 0.9361492 522 15 0.9599499 0.8666877 0.833009 0.951335 0.918339 0.910953 0.919115 0.9609756 0.9503901 0.946826 0.902310 0.9203664 0.954326 0.9697374 0.9210405 0.7405353 0.9746919 0.9027869 0.9568111 0.9534095 0.948779 0.8856607 0.935429 0.9525095 0.9090084 0.9458743 0.9027564 0.8723685 0.9415593 0.940917 0.9627961 0.9401907 0.8743754 0.8990977 0.91194518 0.8679221 0.7261515 0.9199480 0.9101013 0.8452846 0.8658507 0.8894900 0.9290724 11 0.929692 0.933161 -0.00730982 18 0.895965 0.874228 2.1737e-02 0.02490987 0.40349583 inconclusive 1.00000 1.000000 insignificant 0.14244013 0.67320132 insignificant 1.00000 1.000000 insignificant 0.02901070 0.21230760 insignificant 1.00000 insignificant 0.929586 0.8874104 0.0380392 18 0.855239 0.8338858 0.0213532 9.2002e-03 9.9857e-01 weaklyHypermeth 5.1686e-02 1.0000e+00 weaklyHypermeth 2.3045e-01 9.9435e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0565424 1.1857e-01 insignificant 8.3498e-01 insignificant 0.929766 0.890756 0.03907623 16 0.864219 0.896130 -0.0319115 6.9116e-05 1.0000e+00 weaklyHypermeth 2.7646e-03 1.0000e+00 weaklyHypermeth 3.1460e-05 9.9999e-01 weaklyHypermeth 3.9325e-03 1.0000e+00 weaklyHypermeth 0.0254972 3.0304e-01 insignificant 1.0000e+00 insignificant 0.933161 0.8873528 0.04503354 18 0.874228 0.8259756 4.8252e-02 1.1225e-02 8.8622e-01 weaklyHypermeth 6.5641e-02 1.0000e+00 weaklyHypermeth 4.9147e-01 9.4490e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0275317 4.3144e-01 insignificant 1.0000e+00 insignificant 0.933147 0.890673 0.04616345 16 0.867939 0.890937 -0.02299749 1.4827e-05 9.8259e-01 weaklyHypermeth 8.2372e-04 1.0000e+00 weaklyHypermeth 2.3983e-04 9.9583e-01 weaklyHypermeth 2.4602e-02 1.0000e+00 weaklyHypermeth -0.0035135 8.9057e-01 insignificant 1.00000000 insignificant 0.8883197 0.890756 0.0015072 16 0.8735947 0.896130 -0.02253545 3.1048e-01 9.2184e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.1416e-01 9.9158e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0310452 3.8655e-01 insignificant 1.00000000 insignificant chr1 1680248 1681248 16 NADK ENSG00000008130 0.917870 503 14 0.8745103 386 15 0.819172 585 16 0.986212 565 14 0.896931 217 14 0.943713 702 14 0.9296672 279 14 0.963905 440 14 0.9507323 322 14 0.900463 518 12 0.897952 481 14 0.888633 299 12 0.966057 459 14 0.9607948 328 14 0.8855269 503 14 0.772321 128 7 0.9777778 39 6 0.920833 703 16 0.941422 455 14 0.898712 496 16 0.812986 211 12 0.8799980 268 13 0.872468 429 16 0.782740 272 13 0.792776 215 12 0.9630307 445 16 0.879013 414 12 0.664833 217 9 0.935010 468 14 0.9564561 514 16 0.8941418 505 16 0.946166 619 14 0.8627037 391 15 0.9172909 370 14 0.7824460 408 10 0.820707 86 7 0.7984078 208 15 0.9521323 508 16 0.906265 438 16 0.8865829 477 14 0.8496021 185 10 0.9349490 548 13 0.9469789 423 13 0.9368101 0.9107501 0.919485 0.978895 0.973649 0.921288 0.931740 0.9637090 0.9351137 0.944164 0.954955 0.9533320 0.950934 0.9520447 0.9441405 0.8195420 0.9660782 0.9138680 0.9468973 0.9679326 0.953270 0.8969008 0.922696 0.8337129 0.8748236 0.9834151 0.8890888 0.8248841 0.9606841 0.967106 0.9458695 0.9460783 0.8436470 0.9053089 0.84638990 0.9262464 0.8948112 0.9626318 0.9390193 0.9222693 0.8909343 0.9326435 0.9423780 9 0.939343 0.922657 0.01467453 16 0.851575 0.837966 1.3609e-02 0.00037460 0.81470805 weaklyHypermeth 0.17248 1.000000 insignificant 0.02107138 0.95466203 weaklyHypermeth 1.00000 1.000000 insignificant 0.04969221 0.09586899 insignificant 1.00000 insignificant 0.939455 0.8939625 0.0416850 16 0.896395 0.8131937 0.0832010 1.1212e-04 9.7950e-01 weaklyHypermeth 9.5016e-04 1.0000e+00 weaklyHypermeth 1.9906e-01 9.8682e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0590457 9.1147e-02 insignificant 6.8531e-01 insignificant 0.939538 0.923225 0.01819095 14 0.861307 0.916653 -0.0553459 5.7882e-02 9.7700e-01 insignificant 9.0441e-01 1.0000e+00 insignificant 1.7441e-02 9.9298e-01 weaklyHypermeth 4.8448e-01 1.0000e+00 insignificant 0.0097847 6.5414e-01 insignificant 1.0000e+00 insignificant 0.922842 0.8939625 0.02928552 16 0.855753 0.8131937 4.2560e-02 4.9812e-02 6.9364e-01 weaklyHypermeth 2.4538e-01 1.0000e+00 insignificant 8.1619e-01 7.0497e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0093535 8.0757e-01 insignificant 1.0000e+00 insignificant 0.922640 0.923225 0.00573919 14 0.829437 0.916653 -0.08721536 2.8841e-02 2.7620e-01 weaklyHypermeth 4.8883e-01 1.0000e+00 insignificant 2.1029e-01 5.4844e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0399075 2.1559e-01 insignificant 1.00000000 insignificant 0.8948705 0.923188 -0.0184191 14 0.8583711 0.912022 -0.05365132 2.9529e-01 4.0636e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.8382e-01 9.4359e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0492610 1.6994e-01 insignificant 0.98232503 insignificant chr1 2127448 2128448 21 C1orf86 ENSG00000162585 0.769484 461 8 0.7894708 289 10 0.839560 197 9 0.780968 351 8 0.848412 106 8 0.900623 386 10 0.8169074 136 8 0.838392 247 9 0.8335998 246 9 0.902846 187 9 0.862947 366 10 0.641950 112 5 0.853096 235 9 0.9356061 79 4 0.8811858 151 9 0.918394 136 4 0.5560976 120 4 0.719099 772 8 0.918686 390 9 0.867479 379 9 0.879416 154 9 0.6546366 112 6 0.885456 212 8 0.854571 129 9 0.814475 322 7 0.8869514 321 10 0.858207 150 9 0.622235 62 4 0.914334 242 8 0.8820665 364 10 0.9098761 352 10 0.822551 443 9 0.6810592 247 9 0.5166388 345 9 0.3713043 42 3 0.743450 74 7 0.7581069 195 9 0.7447800 305 9 0.696881 185 7 0.7981039 379 8 0.8839319 137 7 0.8322911 316 8 0.8073890 253 8 0.8088812 0.7325954 0.791346 0.628218 0.824185 0.853091 0.899411 0.7775889 0.7796290 0.886796 0.825442 0.7696933 0.786326 0.8072950 0.8401814 0.9062668 0.7283111 0.7019620 0.8733085 0.8220681 0.817969 0.5261984 0.826600 0.8188841 0.9228337 0.8949594 0.7884980 0.7334540 0.8599563 0.818996 0.8535484 0.8410075 0.6570074 0.5759107 0.42431937 0.5368078 0.7450929 0.7778502 0.7705073 0.8009653 0.7853216 0.7531601 0.6867706 4 0.857250 0.871813 -0.01200475 9 0.876601 0.785154 9.1447e-02 0.90574143 0.41870250 insignificant 1.00000 1.000000 insignificant 0.73041672 0.58881194 insignificant 1.00000 1.000000 insignificant -0.00832446 0.81348750 insignificant 1.00000 insignificant 0.857250 0.7077815 0.1453858 9 0.876601 0.6570346 0.2195665 1.9222e-10 1.0000e+00 weaklyHypermeth 3.1512e-09 1.0000e+00 weaklyHypermeth 1.2836e-04 9.9999e-01 weaklyHypermeth 1.9159e-03 1.0000e+00 weaklyHypermeth 0.1878502 3.1807e-02 weaklyHypermeth 3.2791e-01 insignificant 0.857196 0.822835 0.02375801 8 0.865383 0.808800 0.0565834 4.3471e-03 4.8649e-01 weaklyHypermeth 1.0778e-01 1.0000e+00 insignificant 9.5299e-03 3.7918e-01 weaklyHypermeth 3.0742e-01 1.0000e+00 insignificant 0.0200208 6.0528e-01 insignificant 1.0000e+00 insignificant 0.871813 0.7077815 0.15350958 9 0.785154 0.6570346 1.2812e-01 4.8786e-09 1.0000e+00 weaklyHypermeth 7.9978e-08 1.0000e+00 weaklyHypermeth 1.4808e-03 9.9943e-01 weaklyHypermeth 1.6638e-02 1.0000e+00 weaklyHypermeth 0.1961747 2.7014e-02 weaklyHypermeth 2.5246e-01 insignificant 0.872117 0.822835 0.03549212 8 0.856532 0.808800 0.04773220 1.1852e-02 8.5389e-01 weaklyHypermeth 2.2362e-01 1.0000e+00 insignificant 4.4037e-02 7.6927e-01 weaklyHypermeth 8.1550e-01 1.0000e+00 insignificant 0.0283452 5.0618e-01 insignificant 1.00000000 insignificant 0.7075394 0.822835 -0.1227908 8 0.6258560 0.808800 -0.18294371 9.9541e-01 2.3491e-03 weaklyHypometh 1.0000e+00 2.1552e-02 weaklyHypometh 9.8691e-01 7.6445e-03 weaklyHypometh 1.0000e+00 9.2103e-02 weaklyHypometh -0.1678295 5.0614e-02 insignificant 0.40490867 insignificant chr1 2192748 2193748 22 SKI ENSG00000157933 0.622613 347 14 0.6110784 401 14 0.595573 415 14 0.553401 326 12 0.621428 301 11 0.664354 428 13 0.8128775 289 11 0.772597 393 14 0.6040396 326 16 0.626212 368 14 0.815101 551 14 0.764069 151 11 0.366191 454 14 0.6453629 256 12 0.5806879 372 14 0.731427 120 8 0.3549321 83 5 0.521515 581 12 0.501529 573 14 0.508734 384 12 0.698685 238 11 0.1950400 184 7 0.580025 394 14 0.567216 208 10 0.606739 130 11 0.7499107 550 14 0.759136 416 12 0.740590 217 13 0.623887 737 14 0.7252432 461 14 0.4208456 576 14 0.773155 510 14 0.4373465 447 14 0.5604147 564 14 0.5655556 338 6 0.392308 67 7 0.4469068 345 16 0.3308340 783 14 0.117461 761 13 0.1666223 556 13 0.1522734 285 11 0.1430101 581 12 0.2408505 346 12 0.7106938 0.6477545 0.629818 0.612659 0.719240 0.764107 0.824250 0.7466300 0.7329069 0.815361 0.821764 0.7085816 0.533962 0.6783124 0.7006854 0.8202903 0.5977979 0.5782211 0.6176148 0.6292599 0.850911 0.3955153 0.693986 0.7079437 0.6241953 0.7968687 0.7628554 0.8591598 0.7512759 0.710005 0.4870376 0.8769366 0.3890168 0.6138730 0.51418693 0.3238665 0.4771109 0.3371782 0.0760454 0.1226739 0.1796159 0.1654085 0.2645130 9 0.645637 0.683835 -0.03268067 14 0.596517 0.592206 4.3109e-03 0.94069217 0.23983176 insignificant 1.00000 1.000000 insignificant 0.99128627 0.09383486 insignificant 1.00000 1.000000 insignificant -0.00635317 0.91199824 insignificant 1.00000 insignificant 0.645769 0.4709119 0.1558092 14 0.635019 0.4169951 0.2180238 1.6627e-22 8.1791e-01 weaklyHypermeth 6.1582e-21 1.0000e+00 weaklyHypermeth 4.5384e-07 9.3618e-01 weaklyHypermeth 1.2607e-05 1.0000e+00 weaklyHypermeth 0.1581254 6.4303e-03 weaklyHypermeth 8.5738e-02 weaklyHypermeth 0.645678 0.126928 0.49517664 12 0.601597 0.154615 0.4469818 9.2123e-69 9.9992e-01 hypermethylated 9.2123e-66 1.0000e+00 hypermethylated 2.8763e-27 1.0000e+00 hypermethylated 2.8763e-24 1.0000e+00 hypermethylated 0.4496429 9.2535e-11 hypermethylated 9.2535e-08 hypermethylated 0.683709 0.4709119 0.19052776 14 0.565414 0.4169951 1.4842e-01 2.5742e-13 9.8575e-01 weaklyHypermeth 6.6006e-12 1.0000e+00 weaklyHypermeth 1.8560e-05 9.9043e-01 weaklyHypermeth 3.8666e-04 1.0000e+00 weaklyHypermeth 0.1644785 1.7409e-02 weaklyHypermeth 1.8520e-01 insignificant 0.683698 0.126928 0.53753670 12 0.570743 0.154615 0.41612829 4.5956e-40 1.0000e+00 hypermethylated 4.5956e-37 1.0000e+00 hypermethylated 1.1622e-18 1.0000e+00 hypermethylated 1.1622e-15 1.0000e+00 hypermethylated 0.4559960 5.8487e-07 hypermethylated 0.00058487 hypermethylated 0.4709119 0.127028 0.3285804 12 0.4169951 0.163205 0.25379035 1.8432e-14 9.9143e-01 hypermethylated 4.6079e-12 1.0000e+00 hypermethylated 2.0213e-06 9.9416e-01 hypermethylated 5.0532e-04 1.0000e+00 hypermethylated 0.2915175 1.8366e-04 hypermethylated 0.00874553 hypermethylated chr1 3388353 3389353 25 ARHGEF16 ENSG00000130762 0.802284 369 6 0.7180778 169 5 0.575624 174 6 0.645669 360 6 0.689852 111 6 0.818697 373 6 0.4379938 145 6 0.828997 145 6 0.7315251 140 5 0.774260 160 6 0.796844 198 6 0.610417 84 5 0.624098 157 5 0.6544465 144 7 0.6725424 172 5 0.846970 63 3 0.5714286 17 2 0.697002 437 6 0.733136 154 6 0.788690 246 6 0.726747 67 4 0.7852546 120 6 0.709844 165 5 0.842575 81 6 0.604451 315 6 0.8199288 216 6 0.706838 94 4 0.734966 134 3 0.674867 180 6 0.7717758 218 6 0.8193500 196 6 0.670798 232 6 0.0917541 196 6 0.1222108 173 6 0.1428571 211 5 0.391815 191 5 0.1813609 233 6 0.3861899 296 6 0.838440 298 6 0.8592444 219 6 0.7740877 119 6 0.8602970 394 6 0.8149080 204 6 0.7718768 0.6986779 0.570512 0.744417 0.777902 0.778476 0.652758 0.7642673 0.7107908 0.850908 0.778838 0.6419461 0.617764 0.7632093 0.6979601 0.8260377 0.6287851 0.6500781 0.6836414 0.7679845 0.814380 0.7654091 0.758107 0.7097043 0.7272606 0.7493723 0.6693454 0.7479711 0.7923189 0.732863 0.7602597 0.7336107 0.1522289 0.0462996 0.00000000 0.4335029 0.1904083 0.4479378 0.8026698 0.8444405 0.7931228 0.8329687 0.8137980 3 0.739848 0.755976 -0.01963408 6 0.569094 0.590081 -2.0988e-02 0.94200365 0.21385799 insignificant 1.00000 1.000000 insignificant 0.98007314 0.15121947 insignificant 1.00000 1.000000 insignificant -0.03802192 0.23217156 insignificant 1.00000 insignificant 0.739848 0.2256569 0.5209189 6 0.569094 0.1593562 0.4097377 1.3202e-40 1.0000e+00 hypermethylated 8.8015e-39 1.0000e+00 hypermethylated 7.4505e-13 1.0000e+00 hypermethylated 5.7311e-11 1.0000e+00 hypermethylated 0.4815631 9.2320e-05 hypermethylated 2.6377e-03 hypermethylated 0.742962 0.850081 -0.09334217 6 0.758792 0.842467 -0.0836750 9.9940e-01 5.2269e-05 weaklyHypometh 1.0000e+00 3.4846e-03 weaklyHypometh 9.7755e-01 1.5053e-04 weaklyHypometh 1.0000e+00 1.5053e-02 weaklyHypometh -0.1284677 2.0970e-04 weaklyHypometh 1.9064e-02 weaklyHypometh 0.756703 0.2270978 0.51703340 6 0.672065 0.2774850 3.9458e-01 9.0624e-33 1.0000e+00 hypermethylated 7.5520e-31 1.0000e+00 hypermethylated 4.3447e-11 1.0000e+00 hypermethylated 3.6206e-09 1.0000e+00 hypermethylated 0.5195850 7.7113e-05 hypermethylated 2.6591e-03 hypermethylated 0.760020 0.850081 -0.07545976 6 0.770109 0.842467 -0.07235817 9.9048e-01 9.6781e-05 weaklyHypometh 1.0000e+00 8.7983e-03 weaklyHypometh 6.8168e-01 6.7183e-03 weaklyHypometh 1.0000e+00 4.7603e-01 insignificant -0.0904458 3.7977e-03 weaklyHypometh 0.15823880 insignificant 0.2263566 0.850081 -0.6119910 6 0.2124749 0.842467 -0.62999183 1.0000e+00 5.6111e-21 hypomethylated 1.0000e+00 9.3518e-19 hypomethylated 1.0000e+00 1.0343e-09 hypomethylated 1.0000e+00 2.5858e-07 hypomethylated -0.6100308 4.7938e-05 hypomethylated 0.00399484 hypomethylated chr1 3409653 3410653 26 ARHGEF16 ENSG00000130762 0.912963 172 5 0.7552609 129 5 0.743305 90 5 0.971594 120 4 0.769762 36 5 0.928913 160 5 0.8109380 59 5 0.746581 98 5 0.7920684 94 5 0.886684 91 5 0.871146 182 6 0.963636 35 4 0.613561 130 5 1.0000000 6 1 0.9125494 79 5 0.883333 24 3 0.5340136 26 3 0.820168 145 5 0.732617 108 5 0.777940 152 5 0.948395 97 5 0.7970979 95 4 0.806907 127 5 0.743266 79 5 0.896970 106 4 0.8947622 159 5 0.732607 103 5 0.671485 47 5 0.728291 123 5 0.8218144 166 5 0.8587536 138 5 0.900463 197 5 0.4296218 135 5 0.2369735 156 5 0.1942392 72 4 0.383951 102 6 0.3846409 79 5 0.3910547 199 5 0.880209 111 5 0.7516679 166 5 0.9569963 64 4 0.8892555 139 5 0.7304315 151 5 0.9250052 0.8589651 0.749454 0.962315 0.734663 0.936578 0.803268 0.7584638 0.7955900 0.830069 0.892950 0.9622196 0.860899 NA 0.9182922 0.8939394 0.7260359 0.8466750 0.8698988 0.8842664 0.940798 0.7631505 0.803458 0.8643579 0.8746065 0.8673061 0.8013888 0.8354850 0.8681836 0.955977 0.8590733 0.9044666 0.3351795 0.2074244 0.31101276 0.4221741 0.3989215 0.3556674 0.8669235 0.8966426 0.9510894 0.8903310 0.8641205 4 0.864669 0.871260 -0.00651919 5 0.722581 0.752856 -3.0276e-02 0.83883450 0.49954575 insignificant 1.00000 1.000000 insignificant 0.84457299 0.62560365 insignificant 1.00000 1.000000 insignificant 0.00461734 0.89965637 lowCoverage 1.00000 lowCoverage 0.864669 0.3728129 0.4621328 5 0.722581 0.3714358 0.3511447 4.3847e-38 9.9068e-01 hypermethylated 2.5792e-36 1.0000e+00 hypermethylated 3.3338e-07 9.3474e-01 hypermethylated 1.0080e-05 1.0000e+00 hypermethylated 0.4846049 1.2418e-06 lowCoverage 6.5359e-05 lowCoverage 0.865974 0.895404 -0.02965285 5 0.734897 0.644741 0.0901558 8.4552e-01 1.2767e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.7845e-01 2.3156e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0203604 7.0010e-01 lowCoverage 1.0000e+00 lowCoverage 0.871260 0.3728129 0.46647570 5 0.752856 0.3714358 3.8142e-01 1.8082e-31 9.9781e-01 hypermethylated 1.2054e-29 1.0000e+00 hypermethylated 2.4758e-07 8.8575e-01 hypermethylated 9.1697e-06 1.0000e+00 hypermethylated 0.4799876 2.5209e-06 lowCoverage 1.4829e-04 lowCoverage 0.871849 0.895404 -0.02782027 5 0.749296 0.644741 0.10455486 9.0182e-01 2.5614e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.2678e-01 2.0214e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0249778 6.3231e-01 lowCoverage 1.00000000 lowCoverage 0.3828017 0.895404 -0.6057399 5 0.4180045 0.644741 -0.22673688 1.0000e+00 1.5696e-19 hypomethylated 1.0000e+00 1.9620e-17 hypomethylated 9.6781e-01 2.1620e-04 hypomethylated 1.0000e+00 6.1770e-03 hypomethylated -0.5049654 1.5753e-05 lowCoverage 0.00196913 lowCoverage chr1 3448553 3449553 28 MEGF6 ENSG00000162591 0.859037 398 11 0.6801064 309 9 0.711334 249 9 0.829847 471 11 0.800690 149 7 0.880825 535 11 0.8571814 239 9 0.773812 241 8 0.8294038 182 7 0.780734 168 7 0.649725 326 9 0.721716 76 6 0.788260 223 7 0.8469099 69 3 0.8285405 180 7 0.713580 57 5 0.4428571 43 4 0.750424 508 11 0.861596 313 10 0.835167 437 11 0.796688 159 9 0.7630429 196 7 0.840504 244 10 0.813190 167 7 0.734198 283 9 0.8760207 425 13 0.865770 208 7 0.598888 131 6 0.880807 350 9 0.9003037 381 13 0.7887865 397 13 0.902677 500 11 0.3324462 262 9 0.3842452 338 7 0.4692200 420 13 0.591641 297 13 0.3429471 198 9 0.5480172 473 13 0.902986 484 11 0.7147032 419 10 0.5913542 168 10 0.6390688 425 10 0.8111911 451 11 0.8532262 0.6959347 0.682174 0.845958 0.844795 0.828613 0.802964 0.7185250 0.7550555 0.844086 0.758639 0.6538072 0.744347 0.8684362 0.7974072 0.7819676 0.5945808 0.7442353 0.7481574 0.8202484 0.835535 0.7416851 0.781438 0.8434292 0.8334102 0.8596027 0.7581509 0.8069091 0.8088890 0.823698 0.8016398 0.8897664 0.2204554 0.3440208 0.15673694 0.4750565 0.3010171 0.4791630 0.8474285 0.7702472 0.6295703 0.5811151 0.7923117 7 0.785148 0.830908 -0.04333082 7 0.758399 0.824273 -6.5874e-02 0.99999471 0.01744645 weaklyHypometh 1.00000 0.534171 insignificant 0.99991512 0.06000081 insignificant 1.00000 1.000000 insignificant -0.04131893 0.23366877 insignificant 1.00000 insignificant 0.784996 0.4185111 0.4219612 10 0.713787 0.4779919 0.2357950 7.5605e-35 9.9961e-01 hypermethylated 3.9792e-33 1.0000e+00 hypermethylated 3.1271e-11 1.0000e+00 hypermethylated 1.8395e-09 1.0000e+00 hypermethylated 0.3273346 1.9856e-04 hypermethylated 4.9639e-03 hypermethylated 0.785452 0.755008 0.03522457 10 0.808958 0.714922 0.0940365 2.0618e-01 7.2713e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.1882e-01 9.1565e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0402266 5.3732e-01 insignificant 1.0000e+00 insignificant 0.830908 0.4187217 0.44770965 9 0.824273 0.5078664 3.1641e-01 3.7704e-32 9.9997e-01 hypermethylated 2.9003e-30 1.0000e+00 hypermethylated 6.4344e-13 1.0000e+00 hypermethylated 1.6086e-10 1.0000e+00 hypermethylated 0.3686535 7.5809e-05 hypermethylated 2.6591e-03 hypermethylated 0.831585 0.755008 0.08021859 7 0.862558 0.714922 0.14763560 7.8234e-03 9.8445e-01 weaklyHypermeth 1.5966e-01 1.0000e+00 insignificant 1.0139e-03 9.9949e-01 weaklyHypermeth 7.2423e-02 1.0000e+00 weaklyHypermeth 0.0815455 2.3918e-01 insignificant 1.00000000 insignificant 0.4191436 0.755008 -0.3706059 11 0.5417242 0.714922 -0.17319778 1.0000e+00 3.1113e-13 hypomethylated 1.0000e+00 1.6896e-11 hypomethylated 9.9997e-01 2.3355e-06 hypomethylated 1.0000e+00 1.4318e-04 hypomethylated -0.2871080 4.0209e-03 weaklyHypometh 0.07784436 weaklyHypometh chr1 3454053 3455053 29 MEGF6 ENSG00000162591 0.842883 497 16 0.7636782 355 13 0.797585 398 13 0.919968 380 13 0.874978 179 10 0.879105 376 15 0.8665400 421 13 0.824782 175 10 0.7828043 359 13 0.856230 270 13 0.870213 486 13 0.686448 338 13 0.725095 361 13 NA 0 0 0.8176684 383 13 0.766997 288 13 0.5403420 291 13 0.629786 375 15 0.790934 346 13 0.895108 320 16 0.762003 192 12 0.4797030 204 8 0.874153 325 13 0.744585 138 8 0.746528 73 7 0.8758549 379 16 0.816857 185 13 0.789201 181 12 0.764238 262 13 0.8842814 417 13 0.7960247 367 13 0.907373 596 16 0.1943365 444 13 0.1669982 385 13 0.5791282 538 16 0.322282 221 13 0.5509193 185 13 0.3516803 617 16 0.848448 599 15 0.7757935 486 16 0.8613435 166 12 0.7788350 564 13 0.7858026 536 12 0.8446902 0.7908696 0.804609 0.906613 0.891745 0.879054 0.857577 0.8312952 0.7922416 0.884144 0.884132 0.6944986 0.728081 NA 0.8077617 0.7640284 0.5132836 0.5359457 0.7367475 0.8668412 0.815835 0.6236007 0.868615 0.7518101 0.7747336 0.8487291 0.7829201 0.8069112 0.7651788 0.839398 0.8594710 0.8870861 0.1509095 0.1521126 0.36822409 0.1214602 0.5353784 0.0940233 0.8191039 0.7108466 0.8359189 0.6984541 0.7871559 8 0.805244 0.830672 -0.02840443 13 0.830394 0.794780 3.5614e-02 0.99770170 0.03794905 weaklyHypometh 1.00000 0.774470 insignificant 0.80175310 0.16089906 insignificant 1.00000 1.000000 insignificant 0.00964241 0.80877285 insignificant 1.00000 insignificant 0.805185 0.3004184 0.4959152 13 0.819794 0.4111068 0.4086872 7.9193e-61 9.9992e-01 hypermethylated 1.5839e-58 1.0000e+00 hypermethylated 1.9718e-20 9.9989e-01 hypermethylated 6.5726e-18 1.0000e+00 hypermethylated 0.4354852 1.0797e-03 weaklyHypermeth 2.2493e-02 weaklyHypermeth 0.805244 0.766057 0.03930449 10 0.830394 0.818182 0.0122121 6.1681e-02 2.7947e-02 inconclusive 9.3455e-01 4.6787e-01 insignificant 5.0299e-01 7.5020e-02 insignificant 1.0000e+00 9.3774e-01 insignificant -0.0136684 6.4217e-01 insignificant 1.0000e+00 insignificant 0.830922 0.3004184 0.57008961 13 0.844454 0.4111068 4.3335e-01 5.2979e-54 9.9996e-01 hypermethylated 1.0596e-51 1.0000e+00 hypermethylated 1.1126e-18 1.0000e+00 hypermethylated 3.7085e-16 1.0000e+00 hypermethylated 0.4258428 8.6631e-04 hypermethylated 1.7680e-02 hypermethylated 0.830672 0.766057 0.07626954 10 0.794780 0.818182 -0.02340234 2.9473e-03 3.7143e-01 weaklyHypermeth 7.1886e-02 1.0000e+00 weaklyHypermeth 4.9723e-02 6.9719e-02 weaklyHypermeth 8.9463e-01 1.0000e+00 insignificant -0.0233108 5.4243e-01 insignificant 1.00000000 insignificant 0.3004184 0.765957 -0.5259308 13 0.4111068 0.806819 -0.39571185 9.9823e-01 8.5177e-25 hypomethylated 1.0000e+00 1.7035e-22 hypomethylated 9.9975e-01 7.6482e-12 hypomethylated 1.0000e+00 2.5494e-09 hypomethylated -0.4491536 1.0602e-03 weaklyHypometh 0.03420120 weaklyHypometh chr1 3460253 3461253 30 MEGF6 ENSG00000162591 0.826913 327 9 0.8615935 167 10 0.769057 162 8 0.928701 323 11 0.831379 82 5 0.949610 343 8 0.6334707 105 7 0.921506 117 7 0.8429040 75 5 0.950000 76 5 0.920368 194 8 0.957576 38 3 0.849478 89 5 0.8258658 86 5 0.6114676 113 7 1.000000 32 3 NA 0 0 0.833927 570 9 0.938753 210 8 0.844332 285 8 0.788455 107 8 0.7452301 75 6 0.822000 183 10 0.651852 73 6 0.834371 350 7 0.8638264 192 12 0.815830 122 7 0.836861 66 7 0.757723 127 6 0.9341139 187 10 0.9121759 180 10 0.897942 312 10 0.5109797 173 10 0.5840695 198 8 0.6707029 199 6 0.492396 254 8 0.6164358 126 8 0.8185163 285 13 0.906441 305 11 0.8888472 270 9 0.8462853 140 7 0.7865990 276 8 0.9440918 297 11 0.8490351 0.8489517 0.863698 0.923044 0.890563 0.896720 0.727884 0.9247658 0.8377320 0.941279 0.925247 0.9298656 0.941637 0.9484219 0.9194026 0.9889741 NA 0.8813720 0.9141794 0.9410634 0.890480 0.9475863 0.865448 0.9042636 0.9255358 0.9644757 0.9020579 0.8962255 0.8965161 0.926941 0.9592651 0.8914073 0.3489420 0.4475160 0.84894894 0.5509547 0.7195795 0.7358370 0.8984271 0.9623267 0.9101644 0.9595338 0.9194928 3 0.876070 0.886410 -0.01188018 8 0.761174 0.718901 4.2274e-02 0.99000547 0.39264894 insignificant 1.00000 1.000000 insignificant 0.92188404 0.81756704 insignificant 1.00000 1.000000 insignificant 0.03603331 0.28102950 insignificant 1.00000 insignificant 0.876660 0.6469156 0.2415343 8 0.831240 0.6173764 0.2138633 3.2518e-13 1.0000e+00 hypermethylated 6.3762e-12 1.0000e+00 hypermethylated 6.5873e-06 1.0000e+00 hypermethylated 1.4206e-04 1.0000e+00 hypermethylated 0.2422148 2.4448e-03 weaklyHypermeth 4.4451e-02 weaklyHypermeth 0.876623 0.907537 -0.02941247 8 0.821313 0.859654 -0.0383413 9.9063e-01 1.2622e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8787e-01 4.8407e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0167213 6.4976e-01 insignificant 1.0000e+00 insignificant 0.887310 0.6469156 0.24304182 8 0.758840 0.6173764 1.4146e-01 2.9214e-10 1.0000e+00 hypermethylated 5.0369e-09 1.0000e+00 hypermethylated 2.4363e-05 1.0000e+00 hypermethylated 4.8725e-04 1.0000e+00 hypermethylated 0.2061815 6.0108e-03 weaklyHypermeth 8.3483e-02 weaklyHypermeth 0.887646 0.906615 -0.01917164 8 0.791195 0.788382 0.00281251 9.3887e-01 3.9686e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6639e-01 6.1847e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0527546 1.6684e-01 insignificant 1.00000000 insignificant 0.6461039 0.906832 -0.2761816 8 0.5618208 0.811895 -0.25007454 1.0000e+00 7.1263e-05 hypomethylated 1.0000e+00 1.0328e-03 hypomethylated 1.0000e+00 2.1570e-04 hypomethylated 1.0000e+00 6.1770e-03 hypomethylated -0.2589361 1.8697e-03 weaklyHypometh 0.05183865 weaklyHypometh chr1 5989871 5990871 34 KCNAB2 ENSG00000069424 1.000000 2 0 0.0000000 3 0 NA 0 0 NA 0 0 1.000000 4 0 0.333333 16 0 0.3333333 3 0 0.750000 7 0 0.7876267 151 7 0.704554 258 7 0.883333 19 0 0.000000 1 0 0.000000 1 0 0.8523810 21 2 0.0000000 1 0 0.615385 32 2 NA 0 0 NA 0 0 0.100000 6 0 0.850487 77 6 0.197917 14 0 0.7062500 31 2 0.500000 2 0 0.000000 6 0 0.768254 58 7 0.8841355 219 7 0.581162 97 7 0.346885 102 7 0.820028 81 7 0.8630706 466 7 0.7313878 183 7 0.439032 104 7 0.0000000 1 0 NA 0 0 0.3085571 416 5 0.017857 21 2 0.2272727 166 7 0.2173687 163 7 1.000000 1 0 NA 0 0 0.0000000 1 0 0.8749651 210 7 0.2222222 7 0 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0.738769 0.782098 -0.00052123 0 0.657205 0.457691 1.9951e-01 0.02363044 0.95782848 noCoverage 1.00000 1.000000 noCoverage 0.02861136 0.99995845 noCoverage 1.00000 1.000000 noCoverage -0.05669131 0.65947935 lowCoverage 1.00000 lowCoverage 0.742424 0.3272490 0.4599185 0 0.655750 0.1947270 0.4610230 1.8912e-12 1.0000e+00 noCoverage 3.4385e-11 1.0000e+00 noCoverage 9.2081e-04 1.0000e+00 noCoverage 1.1368e-02 1.0000e+00 noCoverage 0.3589410 6.0247e-03 lowCoverage 8.2847e-02 lowCoverage 0.753131 0.853881 -0.10213484 0 0.738861 0.710826 0.0280352 9.7123e-01 4.7916e-01 noCoverage 1.0000e+00 1.0000e+00 noCoverage 8.5043e-01 8.7413e-01 noCoverage 1.0000e+00 1.0000e+00 noCoverage -0.0111447 9.6823e-01 lowCoverage 1.0000e+00 lowCoverage 0.784242 0.3272490 0.46083757 7 0.451182 0.1947270 2.5646e-01 1.2107e-15 1.0000e+00 hypermethylated 3.9055e-14 1.0000e+00 hypermethylated 2.1923e-04 1.0000e+00 hypermethylated 3.4798e-03 1.0000e+00 hypermethylated 0.4156323 1.0653e-03 lowCoverage 2.0837e-02 lowCoverage 0.792846 0.853881 -0.07082562 6 0.725782 0.710826 0.01495599 9.9783e-01 5.1139e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8670e-01 4.3908e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0455466 8.6877e-01 lowCoverage 1.00000000 lowCoverage 0.3306878 0.865116 -0.5584303 6 0.2902072 0.866300 -0.57609264 1.0000e+00 6.7388e-07 hypomethylated 1.0000e+00 1.6847e-05 hypomethylated 9.9999e-01 5.7565e-02 insignificant 1.0000e+00 4.0165e-01 insignificant -0.3700857 2.2796e-01 lowCoverage 1.00000000 lowCoverage chr1 6944471 6945471 47 ENSG00000219260 0.021464 736 19 0.0282601 686 19 0.063203 712 19 0.029454 775 15 0.016392 564 19 0.167634 1129 18 0.0280314 743 20 0.081573 688 20 0.0154165 1097 19 0.053727 967 19 0.062338 683 19 0.026915 744 19 0.019027 818 16 0.0933018 442 17 0.0191087 935 19 0.009561 663 19 0.0490288 611 13 0.052731 904 17 0.062586 510 19 0.060751 899 19 0.079066 316 17 0.0209857 600 18 0.088612 651 19 0.047088 607 21 0.068040 381 14 0.0165658 901 16 0.039824 688 21 0.043668 651 16 0.133570 519 19 0.0137702 1036 19 0.0138759 908 20 0.026064 902 16 0.1956948 546 16 0.1742749 458 19 0.1972222 141 9 0.264749 181 10 0.3862438 419 16 0.1805321 701 19 0.081851 1058 17 0.0685317 829 16 0.0779040 411 12 0.0095251 741 19 0.0772167 829 13 0.0184693 0.0320149 0.023087 0.027973 0.011103 0.039138 0.035790 0.0356444 0.0208002 0.026670 0.031007 0.0354167 0.021503 0.0425944 0.0231336 0.0090238 0.0124346 0.0587616 0.0091718 0.0128624 0.029075 0.0092398 0.030167 0.0055073 0.0191138 0.0132318 0.0255984 0.0057613 0.0398726 0.015695 0.0134518 0.0354245 0.2384359 0.1660005 0.17882515 0.2502512 0.3932148 0.1792873 0.0441694 0.0684617 0.0088358 0.0170955 0.0977216 12 0.028878 0.025377 0.00539812 19 0.072236 0.081416 -9.1805e-03 0.23905252 0.92893788 insignificant 1.00000 1.000000 insignificant 0.16926933 0.99568961 insignificant 1.00000 1.000000 insignificant -0.00123567 0.92764901 insignificant 1.00000 insignificant 0.028827 0.2460090 -0.2164804 19 0.059538 0.2429589 -0.1834207 1.0000e+00 4.6203e-52 hypomethylated 1.0000e+00 2.3101e-49 hypomethylated 1.0000e+00 4.9605e-19 hypomethylated 1.0000e+00 2.4802e-16 hypomethylated -0.1850943 2.0643e-03 weaklyHypometh 3.8228e-02 weaklyHypometh 0.028601 0.054550 -0.02690415 17 0.036128 0.055265 -0.0191371 9.9252e-01 1.2760e-09 weaklyHypometh 1.0000e+00 2.1267e-07 weaklyHypometh 8.9567e-01 1.8247e-03 weaklyHypometh 1.0000e+00 1.0137e-01 insignificant -0.0149806 3.7506e-01 insignificant 1.0000e+00 insignificant 0.025015 0.2457073 -0.22176002 19 0.058362 0.2345811 -1.7622e-01 1.0000e+00 7.2357e-30 hypomethylated 1.0000e+00 3.6178e-27 hypomethylated 1.0000e+00 4.0030e-15 hypomethylated 1.0000e+00 1.3343e-12 hypomethylated -0.1838587 1.8756e-03 weaklyHypometh 3.2905e-02 weaklyHypometh 0.023851 0.054550 -0.03172761 17 0.028854 0.055265 -0.02641152 9.9998e-01 2.3892e-08 weaklyHypometh 1.0000e+00 3.4132e-06 weaklyHypometh 9.9956e-01 1.7389e-03 weaklyHypometh 1.0000e+00 2.1736e-01 insignificant -0.0137449 4.4501e-01 insignificant 1.00000000 insignificant 0.2454844 0.054550 0.1689910 17 0.2209521 0.055265 0.16568708 5.1663e-08 1.0000e+00 weaklyHypermeth 7.3804e-06 1.0000e+00 weaklyHypermeth 2.3935e-05 1.0000e+00 weaklyHypermeth 4.7869e-03 1.0000e+00 weaklyHypermeth 0.1701138 2.5490e-03 weaklyHypermeth 0.06372520 weaklyHypermeth chr1 7140071 7141071 50 ENSG00000219260 0.756521 154 6 0.6017094 84 6 0.578125 38 3 0.891927 132 6 0.494318 80 6 0.792989 88 6 0.6473214 69 6 0.721591 70 6 0.6855159 44 6 0.666667 31 6 0.743125 162 6 0.702381 28 3 0.731602 83 6 0.7625000 63 6 0.7079327 65 6 0.500000 26 3 0.3750000 5 0 0.774529 163 5 0.656250 31 3 0.760226 59 6 0.773810 22 2 0.6000000 5 0 0.719737 70 3 0.876984 40 3 0.707792 73 3 0.5520833 68 6 0.919643 31 3 0.722222 20 0 0.669684 104 3 0.6211081 62 6 0.7795139 81 6 0.611111 72 6 0.4667805 78 6 0.7500000 63 6 0.7414773 57 6 0.416667 9 0 0.4063492 77 6 0.5772727 100 6 0.757300 131 6 0.6821795 112 6 0.7520912 151 6 0.7741395 87 6 0.7202770 95 6 0.8151495 0.6660328 0.622191 0.858731 0.788624 0.725762 0.724619 0.6453864 0.7229802 0.703371 0.710239 0.6179775 0.767255 0.7845506 0.8182800 0.5369181 0.5554604 0.7954900 0.8820225 0.7697864 0.779963 0.7645871 0.760053 0.9182272 0.7291697 0.7303371 0.8905832 0.7921348 0.8416118 0.608177 0.7112984 0.5518102 0.5782504 0.7744783 0.66635050 0.4887640 0.7147316 0.7423051 0.7547005 0.7073610 0.7327737 0.7603525 0.7439965 0 0.731973 0.742284 -0.01187501 6 0.625240 0.727645 -1.0241e-01 0.89334184 0.60351649 insignificant 1.00000 1.000000 insignificant 0.95562930 0.09993181 insignificant 1.00000 1.000000 insignificant -0.03529589 0.40816758 lowCoverage 1.00000 lowCoverage 0.731525 0.6354167 0.0830480 6 0.635597 0.3899675 0.2456291 2.6799e-02 9.9999e-01 weaklyHypermeth 1.3958e-01 1.0000e+00 insignificant 2.2870e-01 9.9998e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.1177537 1.3356e-01 insignificant 9.0860e-01 insignificant 0.732471 0.720486 0.01288014 6 0.703395 0.769382 -0.0659869 5.2973e-01 3.1431e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.2891e-01 3.5420e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0596860 7.0596e-02 insignificant 7.3227e-01 insignificant 0.742284 0.6404199 0.09393055 6 0.727645 0.5199567 2.0769e-01 2.1928e-03 9.9968e-01 weaklyHypermeth 1.5019e-02 1.0000e+00 weaklyHypermeth 4.2073e-03 9.8982e-01 weaklyHypermeth 4.1656e-02 1.0000e+00 weaklyHypermeth 0.1530496 6.6261e-02 lowCoverage 5.2108e-01 lowCoverage 0.741486 0.720486 0.02398953 6 0.693601 0.769382 -0.07578091 2.6642e-01 4.0009e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.4155e-01 6.7678e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0243901 5.1003e-01 lowCoverage 1.00000000 lowCoverage 0.6421053 0.720486 -0.0629998 6 0.5849512 0.769382 -0.18443064 9.8184e-01 8.1217e-04 weaklyHypometh 1.0000e+00 8.7330e-03 weaklyHypometh 9.7293e-01 1.5712e-02 weaklyHypometh 1.0000e+00 1.6715e-01 insignificant -0.1774397 3.8111e-02 weaklyHypometh 0.32297155 insignificant chr1 7315471 7316471 54 ENSG00000207056 0.796696 418 7 0.8801531 294 7 0.815688 131 7 0.928489 379 7 0.871133 161 6 0.936723 749 7 0.8418698 207 7 0.845457 187 7 0.8634777 119 7 0.804323 75 4 0.949219 475 7 0.790476 55 4 0.805556 142 5 0.8613095 56 4 0.9594899 183 5 1.000000 13 0 NA 0 0 0.888516 591 7 0.963199 378 5 0.917308 593 7 0.922449 62 4 1.0000000 11 0 0.941204 196 7 0.988095 101 5 0.869113 162 4 0.9211822 325 7 0.787330 140 5 0.890924 59 4 0.877010 351 6 0.9152809 271 7 0.9035584 379 7 0.948576 450 7 0.9157614 256 7 0.8139593 236 7 0.8750000 137 3 0.824463 60 4 0.7079159 281 7 0.9384535 441 7 0.931864 563 7 0.9133744 444 7 0.8679983 198 7 0.9085564 362 5 0.9010897 381 7 0.9030764 0.8711757 0.800253 0.951571 0.901038 0.962883 0.891499 0.9463024 0.8825067 0.948789 0.942100 0.9042926 0.870621 0.8832207 0.9411470 1.0000000 NA 0.9048970 0.9551236 0.9140396 0.885972 0.9818034 0.945004 0.9834835 0.9134123 0.9158752 0.8426534 0.9255519 0.8887367 0.923780 0.9153410 0.9525650 0.9173119 0.8411473 1.00000000 0.7671789 0.8809653 0.9065945 0.9372534 0.9254721 0.8712542 0.8697198 0.9289064 1 0.924880 0.914571 0.00560886 7 0.829772 0.916953 -8.7181e-02 0.22962654 0.18493239 insignificant 1.00000 1.000000 insignificant 0.77385841 0.05911497 insignificant 1.00000 1.000000 insignificant -0.03377510 0.13509372 insignificant 1.00000 insignificant 0.924880 0.9034091 0.0186843 7 0.829772 0.8785715 -0.0487998 2.8857e-01 5.8832e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4356e-01 1.4851e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0340262 3.8946e-01 insignificant 1.0000e+00 insignificant 0.925577 0.908111 0.01485792 7 0.919739 0.893553 0.0261861 6.4719e-02 8.1998e-01 insignificant 9.5175e-01 1.0000e+00 insignificant 2.3456e-01 9.3271e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0246248 1.8693e-01 insignificant 1.0000e+00 insignificant 0.914571 0.9034091 0.01474517 7 0.916953 0.8785715 3.8382e-02 3.3488e-01 7.3882e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.5398e-01 6.4719e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0678013 1.1347e-01 insignificant 7.4648e-01 insignificant 0.914503 0.908111 0.01208670 7 0.905089 0.893553 0.01153637 1.7890e-01 6.2973e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.1431e-01 9.2775e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0091503 6.4323e-01 insignificant 1.00000000 insignificant 0.9042857 0.908111 -0.0025835 7 0.8969389 0.893553 0.00338594 7.0121e-01 7.2970e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.3915e-01 9.8515e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0586510 1.5154e-01 insignificant 0.90203655 insignificant chr1 7317171 7318171 55 ENSG00000207056 0.825572 118 6 0.7336594 229 6 0.516914 91 6 0.671395 96 3 0.779762 84 7 0.864371 159 7 0.8392857 116 7 0.772633 84 6 0.5997949 73 4 0.606667 41 2 0.797858 212 7 0.628205 44 2 0.716716 95 6 0.4166667 26 2 0.6262626 70 4 0.596814 45 2 0.4300000 41 2 0.422222 39 3 0.850708 68 2 0.616624 77 2 0.779762 48 3 0.6666667 6 0 0.827273 70 6 0.841725 79 5 0.888889 5 0 0.7513940 166 7 0.825856 54 4 0.763548 56 4 0.616905 48 2 0.7687054 278 6 0.7191002 159 6 0.817830 177 6 0.1888465 193 6 0.2790890 112 6 0.2874150 176 6 0.000000 3 0 0.3922323 219 7 0.5692649 125 7 0.472319 204 6 0.5481737 221 6 0.6000000 55 2 0.6111111 24 2 0.5676017 169 4 0.6572391 0.5875365 0.719697 0.829328 0.787037 0.964948 0.839815 0.7701149 0.7020202 0.800000 0.768239 0.6296296 0.601824 0.6964530 0.6430976 0.3921569 0.5687889 0.4567901 0.8198198 0.6628970 0.837963 0.8148148 0.909428 0.8888889 0.8148148 0.7601931 0.8875893 0.6724764 0.6444444 0.630442 0.5911681 0.9055129 0.3081391 0.3862434 0.22883598 0.2649407 0.3504677 0.4407631 0.4297911 0.4921162 0.3111111 0.8148148 0.6347979 0 0.730897 0.765066 -0.04524189 6 0.735709 0.788863 -5.3154e-02 0.99117865 0.03288857 weaklyHypometh 1.00000 0.699757 insignificant 0.99904372 0.01151393 weaklyHypometh 1.00000 0.575697 insignificant -0.10669798 0.01068233 lowCoverage 1.00000 lowCoverage 0.730897 0.2902056 0.4091081 6 0.735709 0.3066245 0.4290849 5.7862e-23 1.0000e+00 hypermethylated 2.3145e-21 1.0000e+00 hypermethylated 3.3592e-08 1.0000e+00 hypermethylated 1.3997e-06 1.0000e+00 hypermethylated 0.3794652 3.0330e-03 lowCoverage 5.0713e-02 lowCoverage 0.730897 0.655275 0.18016909 5 0.735709 0.510612 0.2250976 3.5320e-07 1.0000e+00 weaklyHypermeth 2.2776e-05 1.0000e+00 weaklyHypermeth 1.1834e-02 9.9971e-01 weaklyHypermeth 3.4805e-01 1.0000e+00 insignificant 0.1057654 1.7700e-02 lowCoverage 3.4038e-01 lowCoverage 0.765066 0.2902056 0.45127363 6 0.788863 0.3066245 4.8224e-01 4.2701e-21 1.0000e+00 hypermethylated 1.7080e-19 1.0000e+00 hypermethylated 7.6381e-10 1.0000e+00 hypermethylated 4.2434e-08 1.0000e+00 hypermethylated 0.4861632 1.0835e-03 lowCoverage 2.0837e-02 lowCoverage 0.765066 0.655275 0.23573993 5 0.788863 0.510612 0.27825160 2.0626e-12 1.0000e+00 hypermethylated 5.1565e-10 1.0000e+00 hypermethylated 6.9311e-06 1.0000e+00 hypermethylated 1.1552e-03 1.0000e+00 hypermethylated 0.2124634 5.8841e-05 lowCoverage 0.01961364 lowCoverage 0.2902056 0.655275 -0.1578644 5 0.3066245 0.510612 -0.20398736 9.9987e-01 5.8989e-04 weaklyHypometh 1.0000e+00 6.7804e-03 weaklyHypometh 9.9855e-01 5.9634e-02 insignificant 1.0000e+00 4.0845e-01 insignificant -0.2736998 1.5655e-02 lowCoverage 0.18523719 lowCoverage chr1 7371471 7372471 58 ENSG00000207056 0.652616 82 4 0.7937922 106 3 0.939394 76 3 0.573593 45 2 0.617006 58 3 0.665839 155 7 0.3249158 39 3 0.700425 142 7 0.5152153 98 7 0.512906 58 3 0.831188 99 3 0.666667 23 2 0.553564 152 7 0.8948413 53 3 0.4745098 90 5 0.500000 4 0 NA 0 0 0.579611 119 6 0.589906 80 3 0.565385 35 2 0.448889 33 3 0.5032206 60 3 0.764646 32 3 0.692708 26 2 0.539474 50 4 0.9206239 103 3 0.802733 91 4 0.320000 34 3 0.727283 62 4 0.7359580 132 3 0.7980094 183 7 0.639405 99 6 0.3395993 126 3 0.0488284 107 7 0.6666667 13 1 0.000000 9 0 0.3259547 78 4 0.2591347 201 7 0.717449 56 6 0.7946429 32 2 0.4563492 24 2 0.4919913 72 6 0.4326185 113 6 0.6512716 0.7556435 0.844697 0.752656 0.769617 0.778409 0.607438 0.8021645 0.8081294 0.865587 0.818759 0.7209596 0.654880 0.7993777 0.7524510 0.4914288 NA 0.6873335 0.8013035 0.7187646 0.679545 0.6032060 0.852273 0.7935606 0.8901515 0.8383033 0.8743174 0.5853306 0.7832312 0.837519 0.8036747 0.9045998 0.1458372 0.0673100 0.87500000 0.0000000 0.3272129 0.5087521 0.7155912 0.6314935 0.6769481 0.7085399 0.5052637 2 0.732450 0.786268 -0.04465425 4 0.557011 0.554748 2.2635e-03 0.80703307 0.06640611 lowCoverage 1.00000 1.000000 lowCoverage 0.92977225 0.34870854 lowCoverage 1.00000 1.000000 lowCoverage -0.02872600 0.64253221 lowCoverage 1.00000 lowCoverage 0.732404 0.2265918 0.4896915 4 0.496046 0.2273699 0.2686757 1.1360e-22 1.0000e+00 lowCoverage 4.3692e-21 1.0000e+00 lowCoverage 1.4327e-05 9.9997e-01 lowCoverage 2.8092e-04 1.0000e+00 lowCoverage 0.3556558 1.2956e-02 lowCoverage 1.5995e-01 lowCoverage 0.735925 0.572391 0.13702051 3 0.637208 0.533090 0.1041182 2.8752e-05 9.2325e-01 lowCoverage 1.1980e-03 1.0000e+00 lowCoverage 1.0445e-02 9.7909e-01 lowCoverage 3.2640e-01 1.0000e+00 lowCoverage 0.0504095 5.6126e-01 lowCoverage 1.0000e+00 lowCoverage 0.791713 0.2259887 0.54059054 4 0.687778 0.2217123 4.6607e-01 9.9741e-21 9.9807e-01 lowCoverage 3.8362e-19 1.0000e+00 lowCoverage 2.3738e-06 9.9985e-01 lowCoverage 6.0867e-05 1.0000e+00 lowCoverage 0.3843818 8.5803e-03 lowCoverage 1.0593e-01 lowCoverage 0.795711 0.572391 0.18791639 3 0.745216 0.533090 0.21212587 8.2508e-06 9.9992e-01 lowCoverage 5.1568e-04 1.0000e+00 lowCoverage 6.8354e-03 9.9800e-01 lowCoverage 2.1763e-01 1.0000e+00 lowCoverage 0.0791355 4.0194e-01 lowCoverage 1.00000000 lowCoverage 0.2234848 0.572391 -0.3533220 5 0.1581474 0.533090 -0.37494237 9.9999e-01 1.2882e-08 hypomethylated 1.0000e+00 4.7713e-07 hypomethylated 9.9994e-01 1.1404e-03 weaklyHypometh 1.0000e+00 2.0007e-02 weaklyHypometh -0.3052463 3.5205e-02 lowCoverage 0.31348354 lowCoverage chr1 7473071 7474071 66 CAMTA1 ENSG00000171735 0.632685 163 6 0.7545274 166 9 0.471384 121 8 0.682083 119 6 0.700811 91 6 0.683483 272 7 0.6218715 121 7 0.756890 131 8 0.6446128 120 9 0.692215 129 9 0.811587 239 9 0.716914 86 7 0.702911 150 9 0.6888889 19 2 0.7306361 119 7 0.579606 60 5 0.7674359 62 4 0.728518 120 4 0.742978 156 9 0.661959 239 9 0.740865 107 8 0.5225659 78 4 0.753785 160 9 0.748918 58 6 0.634083 76 4 0.6545303 144 9 0.664791 119 8 0.644843 88 6 0.709506 148 9 0.7307125 206 9 0.6904436 167 9 0.769166 264 9 0.6587255 152 9 0.6303922 119 9 0.7724627 155 8 0.737654 38 4 0.6228175 119 8 0.6761627 155 9 0.796986 175 7 0.7280303 156 7 0.6963342 114 4 0.6540879 152 4 0.7722415 131 5 0.6155446 0.5847439 0.501781 0.619827 0.589413 0.619045 0.552131 0.6146276 0.5472334 0.573286 0.731998 0.6125933 0.667088 0.5787610 0.6246618 0.5430976 0.5753846 0.5931461 0.6412253 0.6997547 0.761296 0.6140164 0.589285 0.7992593 0.5866815 0.6172109 0.6105079 0.6166879 0.6372123 0.647463 0.5404372 0.6322222 0.5526816 0.6168251 0.61169363 0.6658677 0.5362963 0.6481260 0.7191876 0.5987037 0.6847201 0.6359920 0.6850323 3 0.663064 0.710657 -0.02039169 9 0.698489 0.698514 -2.4616e-05 0.78831018 0.13237457 insignificant 1.00000 1.000000 insignificant 0.86792549 0.23231227 insignificant 1.00000 1.000000 insignificant -0.00008424 0.99746221 insignificant 1.00000 insignificant 0.663064 0.7032520 0.0056060 9 0.698489 0.6631647 0.0353247 2.4662e-01 3.6300e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.1042e-01 4.8445e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0055640 8.5511e-01 insignificant 1.0000e+00 insignificant 0.663064 0.668956 -0.05406371 4 0.698489 0.745364 -0.0468742 9.9720e-01 2.1178e-02 lowCoverage 1.0000e+00 3.8505e-01 lowCoverage 9.9980e-01 1.1459e-02 lowCoverage 1.0000e+00 2.7284e-01 lowCoverage -0.0409361 2.1933e-01 insignificant 1.0000e+00 insignificant 0.710657 0.7032520 0.02343324 9 0.698514 0.6631647 3.5349e-02 1.2515e-01 8.7925e-01 insignificant 5.5415e-01 1.0000e+00 insignificant 2.2887e-01 8.1968e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0056482 8.6172e-01 insignificant 1.0000e+00 insignificant 0.710657 0.668956 -0.04385589 4 0.698514 0.745364 -0.04684957 9.9383e-01 5.0079e-02 lowCoverage 1.0000e+00 9.4489e-01 lowCoverage 9.9985e-01 7.1059e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0408519 2.4138e-01 insignificant 1.00000000 insignificant 0.7032520 0.668956 -0.0831170 4 0.6631647 0.745364 -0.08219889 9.7884e-01 5.8251e-03 lowCoverage 1.0000e+00 4.5508e-02 lowCoverage 9.9910e-01 1.4197e-02 lowCoverage 1.0000e+00 1.5431e-01 lowCoverage -0.0465001 2.2327e-01 insignificant 1.00000000 insignificant chr1 7532471 7533471 69 CAMTA1 ENSG00000171735 0.733759 84 3 0.4414215 109 3 0.644000 110 5 0.466667 55 3 0.235404 40 3 0.548485 131 3 0.6438095 71 3 0.417019 104 5 0.3752914 69 5 0.572182 86 5 0.711856 127 5 0.710000 34 3 0.782901 106 5 0.8918919 48 2 0.8100475 92 3 0.641026 17 1 0.2907407 18 2 0.437576 67 3 0.628243 137 5 0.512315 107 4 0.690476 59 5 0.8687259 54 2 0.559556 72 5 0.415887 54 5 0.560784 25 1 0.6664646 162 5 0.456408 96 3 0.687670 58 4 0.762007 91 3 0.6592521 190 3 0.6835891 158 5 0.770705 130 5 0.4261111 114 5 0.5341026 76 5 0.5394737 116 3 0.316667 27 2 0.4165517 101 4 0.6198899 127 5 0.782182 64 3 0.7601336 95 3 0.5555556 38 1 0.7997835 74 3 0.8354701 72 3 0.7256344 0.5911709 0.734633 0.576271 0.396331 0.675912 0.596893 0.4993920 0.5288610 0.567373 0.739972 0.7250000 0.831113 0.7626668 0.7684834 0.8116037 0.6506037 0.7994864 0.7349503 0.6266794 0.802058 0.8749427 0.680395 0.3386199 0.5461947 0.7496918 0.5130160 0.5802807 0.6952098 0.791785 0.8047651 0.7205811 0.3955979 0.6710724 0.60247547 0.3884181 0.3373271 0.7084627 0.7986169 0.8327022 0.6355932 0.8357180 0.8871686 1 0.643300 0.691036 -0.04360663 3 0.575683 0.648648 -7.2965e-02 0.99335888 0.01378642 lowCoverage 1.00000 0.492372 lowCoverage 0.99268722 0.02709839 lowCoverage 1.00000 0.763806 lowCoverage -0.07372871 0.18751391 lowCoverage 1.00000 lowCoverage 0.643300 0.4937611 0.1415126 3 0.575683 0.4842906 0.0913927 2.3300e-04 7.4909e-01 lowCoverage 1.8790e-03 1.0000e+00 lowCoverage 1.2357e-02 8.9191e-01 lowCoverage 1.0724e-01 1.0000e+00 lowCoverage 0.0992658 1.1797e-01 lowCoverage 8.3498e-01 lowCoverage 0.643300 0.749271 -0.14622498 3 0.575683 0.756761 -0.1810775 9.9855e-01 4.3638e-04 lowCoverage 1.0000e+00 2.1925e-02 lowCoverage 9.9717e-01 9.2895e-03 lowCoverage 1.0000e+00 2.4446e-01 lowCoverage -0.1718931 2.1703e-02 lowCoverage 3.8756e-01 lowCoverage 0.691036 0.4937611 0.18144628 5 0.648648 0.4842906 1.6436e-01 2.8365e-06 9.1083e-01 weaklyHypermeth 3.2604e-05 1.0000e+00 weaklyHypermeth 7.0286e-03 9.8127e-01 weaklyHypermeth 6.3897e-02 1.0000e+00 weaklyHypermeth 0.1729945 1.1886e-02 lowCoverage 1.3975e-01 lowCoverage 0.691036 0.749271 -0.11499559 3 0.648648 0.756761 -0.10811248 8.5676e-01 3.2061e-02 lowCoverage 1.0000e+00 7.1246e-01 lowCoverage 8.2801e-01 5.4162e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0981644 1.4867e-01 lowCoverage 1.00000000 lowCoverage 0.4937611 0.749271 -0.3066020 3 0.4842906 0.756761 -0.27247019 9.9064e-01 2.4454e-06 lowCoverage 1.0000e+00 5.2030e-05 lowCoverage 9.9553e-01 2.0234e-03 lowCoverage 1.0000e+00 3.2635e-02 lowCoverage -0.2711589 3.0317e-03 lowCoverage 0.06890322 lowCoverage chr1 7556171 7557171 70 CAMTA1 ENSG00000171735 0.728735 496 10 0.6323337 281 8 0.697218 204 10 0.794235 424 10 0.739691 152 8 0.719911 434 10 0.6064613 179 10 0.769936 281 10 0.5722597 178 8 0.690252 209 7 0.754958 327 10 0.728546 101 7 0.617040 270 8 0.8126019 132 7 0.7230429 252 8 0.715475 75 6 0.5462121 58 6 0.643871 425 10 0.802591 188 8 0.650371 400 10 0.738268 99 8 0.5647321 115 7 0.644494 249 8 0.774395 155 9 0.701235 174 10 0.7888734 251 10 0.673771 142 10 0.736818 98 6 0.786964 242 8 0.6925087 325 10 0.7350003 325 10 0.693332 446 10 0.6001736 274 10 0.6471186 170 8 0.7487174 237 7 0.620556 89 7 0.5276644 247 10 0.7047529 311 10 0.691930 361 10 0.7354759 453 10 0.7644115 283 10 0.7741153 371 8 0.8013702 440 10 0.6521471 0.6367511 0.652252 0.735223 0.631573 0.686449 0.588502 0.6785861 0.5936448 0.620197 0.681268 0.6844815 0.708706 0.6732612 0.6184459 0.7288997 0.5643118 0.6795400 0.7293124 0.7044652 0.709874 0.6404623 0.589481 0.6905006 0.6916755 0.7052120 0.6535033 0.6424633 0.6638038 0.684654 0.6088664 0.6711493 0.5837847 0.6026390 0.63103495 0.5053689 0.5504013 0.5871035 0.6564805 0.6524478 0.6612156 0.6793348 0.6877815 7 0.702073 0.708890 -0.00435139 10 0.623070 0.732478 -1.0941e-01 0.91510039 0.07149474 insignificant 1.00000 1.000000 insignificant 0.91633132 0.06483715 insignificant 1.00000 1.000000 insignificant -0.01357895 0.59499263 insignificant 1.00000 insignificant 0.702212 0.6024096 0.0991641 10 0.670998 0.6263861 0.0446119 5.0023e-09 9.0772e-01 weaklyHypermeth 7.0456e-08 1.0000e+00 weaklyHypermeth 1.1090e-02 9.9492e-01 weaklyHypermeth 1.0036e-01 1.0000e+00 insignificant 0.0557900 1.6159e-01 insignificant 1.0000e+00 insignificant 0.703045 0.668239 0.01207744 10 0.726915 0.773710 -0.0467953 4.1006e-01 4.8181e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.8385e-01 7.9739e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0561736 4.6498e-02 weaklyHypometh 6.0036e-01 insignificant 0.708222 0.6024096 0.10077084 10 0.711899 0.6263861 8.5513e-02 1.0346e-06 9.7375e-01 weaklyHypermeth 1.2933e-05 1.0000e+00 weaklyHypermeth 7.3334e-03 9.9793e-01 weaklyHypermeth 6.5794e-02 1.0000e+00 weaklyHypermeth 0.0693689 9.5295e-02 insignificant 6.5270e-01 insignificant 0.710940 0.668239 0.01369971 10 0.771224 0.773710 -0.00248583 4.3723e-02 8.6173e-01 weaklyHypermeth 6.3366e-01 1.0000e+00 insignificant 2.5632e-01 9.4755e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0425947 1.3260e-01 insignificant 1.00000000 insignificant 0.6028636 0.668239 -0.0810528 10 0.6785850 0.773710 -0.09512491 9.6426e-01 4.1522e-03 weaklyHypometh 1.0000e+00 3.4316e-02 weaklyHypometh 9.9578e-01 5.6697e-02 insignificant 1.0000e+00 4.0165e-01 insignificant -0.1119636 1.6774e-02 weaklyHypometh 0.19213639 insignificant chr1 7871571 7872571 75 UTS2 ENSG00000049247 0.733115 174 5 0.7016431 147 5 0.610000 40 4 0.669559 210 5 0.933333 41 2 0.811688 160 5 0.6250000 34 3 0.751973 105 5 0.8378882 83 4 0.741667 37 4 0.777537 263 5 0.550000 20 1 0.784009 119 5 0.6479469 44 4 0.7658863 52 4 0.566667 11 0 0.7500000 5 0 0.771596 144 5 0.793793 103 5 0.775030 185 5 0.687179 44 4 0.9592532 58 3 0.746995 103 5 0.757804 57 5 0.933261 37 4 0.5147059 148 5 0.692767 68 4 0.638889 28 1 0.790549 98 5 0.6014493 183 5 0.6949145 188 5 0.814306 226 5 0.7903844 153 4 0.7474026 94 5 0.7994792 157 5 0.600000 17 1 0.6288884 86 3 0.7667853 171 5 0.696564 143 5 0.7337694 163 5 0.7988889 99 5 0.7418367 64 2 0.7027283 131 5 0.8038865 0.7124980 0.644444 0.801673 0.960573 0.832921 0.646505 0.7885288 0.7775596 0.829749 0.802571 0.6106356 0.828819 0.7678586 0.7436257 0.7150538 0.8324637 0.8786876 0.8400055 0.8389278 0.767246 0.9569159 0.817586 0.7036866 0.9399292 0.7725332 0.7393381 0.6881720 0.8585372 0.808672 0.8214420 0.8436968 0.8033863 0.7321603 0.84677419 0.7634409 0.6766953 0.6432432 0.8960647 0.8026361 0.8516846 0.8498464 0.7500952 1 0.802632 0.821486 -0.00956341 5 0.732197 0.638728 9.3468e-02 0.32660473 0.56118353 insignificant 1.00000 1.000000 insignificant 0.55385894 0.63814799 insignificant 1.00000 1.000000 insignificant -0.00608956 0.88804627 lowCoverage 1.00000 lowCoverage 0.802226 0.7345133 0.0693374 5 0.640672 0.7643655 -0.1236935 3.9751e-01 6.7499e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.2807e-01 7.5542e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0077600 8.5398e-01 lowCoverage 1.0000e+00 lowCoverage 0.802632 0.845000 -0.02051096 5 0.732197 0.665008 0.0671882 7.1192e-01 4.1598e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.3519e-01 4.2158e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0048408 8.6471e-01 lowCoverage 1.0000e+00 lowCoverage 0.821486 0.7352071 0.08448761 5 0.638728 0.8021320 -1.6340e-01 2.2228e-01 6.5249e-01 insignificant 9.3791e-01 1.0000e+00 insignificant 6.5597e-01 6.9929e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0138495 7.8980e-01 lowCoverage 1.0000e+00 lowCoverage 0.821486 0.845000 -0.01182546 5 0.638728 0.665008 -0.02628024 8.1191e-01 4.6524e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.0805e-01 5.7219e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0012488 9.7627e-01 lowCoverage 1.00000000 lowCoverage 0.7352071 0.845000 -0.0912991 5 0.8021320 0.665008 0.13712368 8.7022e-01 5.6444e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.7158e-01 7.8189e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0126007 7.5867e-01 lowCoverage 1.00000000 lowCoverage chr1 7987471 7988471 78 ENSG00000200344 0.855499 156 5 0.7466251 193 5 0.622789 195 5 0.751538 142 5 0.672859 104 5 0.693635 260 5 0.8295322 169 5 0.663208 185 5 0.6742857 275 5 0.754474 208 5 0.772332 163 5 0.688621 195 5 0.843892 223 5 0.6536173 136 5 0.8202486 205 5 0.760606 58 5 0.8287879 48 4 0.358150 140 5 0.872180 47 5 0.830774 187 5 0.764444 28 4 0.7039161 78 5 0.789444 99 5 0.625000 39 4 0.866667 36 4 0.7828884 296 5 0.604396 68 4 0.744892 82 5 0.724097 99 5 0.7645741 311 5 0.8480849 213 5 0.778358 187 5 0.0286244 228 5 0.0000000 47 5 0.0000000 76 3 0.000000 6 0 0.0054054 223 5 0.0000000 271 5 0.776226 94 5 0.5393939 69 5 0.6611111 34 1 0.2571429 67 5 0.7921053 108 5 0.8285614 0.7071545 0.611600 0.762354 0.658887 0.685904 0.809099 0.6563528 0.6598732 0.750436 0.744385 0.6644390 0.821549 0.6122490 0.8039570 0.6481390 0.8648304 0.3691232 0.8526071 0.8227863 0.735507 0.6732403 0.772985 0.6179801 0.8007246 0.7626112 0.5712195 0.7401501 0.6976053 0.734303 0.8510830 0.7320273 0.0216106 0.0000000 0.00063577 0.0019751 0.0029377 0.0000000 0.7852081 0.5822354 0.6209239 0.2657005 0.7894022 4 0.729401 0.763672 -0.03535142 5 0.729497 0.764599 -3.5103e-02 0.92692445 0.02083268 weaklyHypometh 1.00000 0.534171 insignificant 0.34808098 0.21998802 insignificant 1.00000 1.000000 insignificant -0.01504724 0.66583703 lowCoverage 1.00000 lowCoverage 0.729401 0.0094007 0.7220528 5 0.729497 0.0093034 0.7201932 5.1056e-52 1.0000e+00 hypermethylated 6.3820e-50 1.0000e+00 hypermethylated 5.5709e-14 1.0000e+00 hypermethylated 9.2849e-12 1.0000e+00 hypermethylated 0.7290112 1.9484e-17 lowCoverage 9.7421e-15 lowCoverage 0.729401 0.647849 0.05377948 5 0.729497 0.645991 0.0835053 9.9986e-03 9.8207e-01 weaklyHypermeth 2.0827e-01 1.0000e+00 insignificant 6.9953e-03 9.8118e-01 weaklyHypermeth 2.4983e-01 1.0000e+00 insignificant 0.1294869 2.6330e-01 lowCoverage 1.0000e+00 lowCoverage 0.763672 0.0094007 0.75468661 5 0.764599 0.0093034 7.5530e-01 9.2220e-58 1.0000e+00 hypermethylated 9.2220e-55 1.0000e+00 hypermethylated 3.9247e-12 1.0000e+00 hypermethylated 6.5412e-10 1.0000e+00 hypermethylated 0.7440584 5.4326e-13 lowCoverage 5.4326e-10 lowCoverage 0.763672 0.647849 0.07915806 5 0.764599 0.645991 0.11860807 4.3397e-04 9.7033e-01 weaklyHypermeth 1.5499e-02 1.0000e+00 weaklyHypermeth 6.9642e-03 9.5205e-01 weaklyHypermeth 2.1763e-01 1.0000e+00 insignificant 0.1445342 2.1800e-01 lowCoverage 1.00000000 lowCoverage 0.0094007 0.647849 -0.6402801 5 0.0093034 0.645991 -0.63668798 1.0000e+00 5.8383e-16 hypomethylated 1.0000e+00 4.8653e-14 hypomethylated 1.0000e+00 1.2473e-08 hypomethylated 1.0000e+00 1.3859e-06 hypomethylated -0.5995242 3.6016e-03 lowCoverage 0.07203215 lowCoverage chr1 8099971 8100971 87 ENSG00000219182 0.697463 215 7 0.7644919 93 4 0.833333 55 4 0.729245 123 7 0.615268 50 4 0.736596 209 7 0.7013534 78 4 0.805556 62 4 0.6705087 62 4 0.760167 56 4 0.755702 111 4 0.642803 44 4 0.840226 82 4 NA 0 0 0.8109244 76 4 0.774134 64 4 0.7763566 298 7 0.691751 128 7 0.825000 96 4 0.743017 188 7 0.833333 21 3 0.8888889 34 4 0.724588 133 7 0.830952 36 3 0.875000 18 2 0.7741837 88 4 0.836523 47 3 0.886364 27 2 0.884454 43 3 0.8538515 81 4 0.6805556 85 4 0.690995 209 7 0.6567460 52 4 0.7250000 57 4 0.7448316 115 4 0.877273 40 4 0.6250000 30 2 0.7252024 66 4 0.711695 170 7 0.7564626 171 7 0.7411517 122 7 0.7495527 241 7 0.6873711 193 7 0.7794595 0.8405989 0.853333 0.865741 0.615270 0.813079 0.738424 0.8589744 0.6825608 0.782922 0.725434 0.6622611 0.829439 NA 0.8519285 0.7470962 0.8380900 0.7665587 0.8412821 0.8561204 0.853846 0.8598291 0.845980 0.7596337 0.8217949 0.8056362 0.8045327 0.8391608 0.8351002 0.887714 0.7438527 0.8257259 0.6966422 0.7979487 0.72144075 0.8255944 0.7064103 0.7811741 0.8170870 0.8504255 0.8867383 0.8327497 0.8023575 3 0.769194 0.783455 0.00233917 4 0.721721 0.704092 1.7629e-02 0.40619702 0.72735304 lowCoverage 1.00000 1.000000 lowCoverage 0.99049957 0.23135436 lowCoverage 1.00000 1.000000 lowCoverage -0.06731289 0.01967486 lowCoverage 1.00000 lowCoverage 0.798591 0.7416667 0.0492926 4 0.784665 0.7327381 0.0519273 5.2541e-02 8.4634e-01 lowCoverage 2.6140e-01 1.0000e+00 lowCoverage 1.7128e-01 6.5709e-01 lowCoverage 9.1593e-01 1.0000e+00 lowCoverage 0.0203190 6.1547e-01 lowCoverage 1.0000e+00 lowCoverage 0.769194 0.778149 -0.02216852 7 0.721721 0.728210 -0.0064893 6.9622e-01 6.0437e-02 insignificant 1.0000e+00 8.2790e-01 insignificant 9.6688e-01 3.5720e-02 weaklyHypometh 1.0000e+00 5.8023e-01 insignificant 0.0167479 4.0598e-01 lowCoverage 1.0000e+00 lowCoverage 0.794574 0.7416667 0.04809604 4 0.779037 0.7327381 4.6299e-02 4.0957e-02 7.7169e-01 lowCoverage 2.0685e-01 1.0000e+00 lowCoverage 3.3410e-02 9.2352e-01 lowCoverage 2.2040e-01 1.0000e+00 lowCoverage 0.0876319 6.6698e-02 lowCoverage 5.2108e-01 lowCoverage 0.783455 0.778149 -0.03354039 4 0.704092 0.728210 -0.02411806 8.7335e-01 6.6630e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 6.3852e-01 5.8282e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0840608 5.1159e-03 lowCoverage 0.20034576 lowCoverage 0.7416667 0.846154 -0.0860920 4 0.7327381 0.824398 -0.09165954 9.7220e-01 3.3999e-02 lowCoverage 1.0000e+00 2.0358e-01 lowCoverage 9.4202e-01 4.3645e-02 lowCoverage 1.0000e+00 3.3317e-01 lowCoverage -0.0035711 9.2802e-01 lowCoverage 1.00000000 lowCoverage chr1 8103171 8104171 89 ENSG00000219182 0.682213 243 6 0.6434985 106 6 0.541555 121 6 0.776159 255 6 0.552041 34 5 0.649361 182 6 0.7659314 98 6 0.654825 143 6 0.7928333 119 6 0.881456 79 6 0.818482 175 6 0.732089 76 6 0.275789 137 6 NA 0 0 0.5814259 146 6 0.633333 50 6 0.5912698 55 6 0.450426 306 6 0.684794 76 6 0.756305 141 6 0.606349 38 5 0.4058145 157 6 0.671773 149 6 0.497619 55 5 0.560201 123 6 0.4937320 184 6 0.614054 163 7 0.621429 38 5 0.749634 143 6 0.3845423 177 6 0.5828973 163 6 0.602756 274 6 0.9218183 179 6 0.9597424 127 6 0.8000000 149 4 0.931746 43 6 0.9473443 61 6 0.6505495 124 6 0.352916 280 6 0.3277370 281 6 0.4627578 117 6 0.5537705 229 6 0.5081806 297 6 0.7944055 0.6488605 0.539145 0.774464 0.648625 0.679312 0.759830 0.7612931 0.7591396 0.861952 0.821418 0.6910529 0.272466 NA 0.5756683 0.6096257 0.6914736 0.5262155 0.6274206 0.7115237 0.692929 0.3069798 0.780951 0.5881462 0.4967085 0.5732728 0.6558718 0.6599694 0.7029768 0.449922 0.6796412 0.7030481 0.9212014 0.9562376 0.94904106 0.9275274 0.9415707 0.7598519 0.2401202 0.3801936 0.3787974 0.5535444 0.4250150 6 0.653029 0.576923 0.07671374 6 0.639548 0.560946 7.8603e-02 0.02498138 0.99888713 weaklyHypermeth 1.00000 1.000000 insignificant 0.03122919 0.99611032 weaklyHypermeth 1.00000 1.000000 insignificant 0.09008876 0.05253828 insignificant 1.00000 insignificant 0.653029 0.9121523 -0.2350290 6 0.639548 0.8524107 -0.2128624 9.9999e-01 1.2707e-09 hypomethylated 1.0000e+00 1.5884e-07 hypomethylated 9.9981e-01 8.5510e-10 hypomethylated 1.0000e+00 1.7102e-07 hypomethylated -0.2125446 5.1626e-03 weaklyHypometh 7.5920e-02 weaklyHypometh 0.653029 0.370432 0.26810421 6 0.639548 0.437947 0.2016016 7.0091e-10 9.9893e-01 hypermethylated 1.1682e-07 1.0000e+00 hypermethylated 3.5952e-07 9.9856e-01 hypermethylated 8.9879e-05 1.0000e+00 hypermethylated 0.2149165 3.3750e-03 weaklyHypermeth 9.6429e-02 weaklyHypermeth 0.576923 0.9121523 -0.30220807 6 0.560946 0.8524107 -2.9147e-01 1.0000e+00 4.9449e-12 hypomethylated 1.0000e+00 8.2415e-10 hypomethylated 9.9998e-01 8.0116e-09 hypomethylated 1.0000e+00 1.3353e-06 hypomethylated -0.3026333 5.7773e-04 hypomethylated 1.2036e-02 hypomethylated 0.576923 0.370432 0.19160950 6 0.560946 0.437947 0.12299886 8.2932e-05 9.5626e-01 weaklyHypermeth 3.7696e-03 1.0000e+00 weaklyHypermeth 2.7062e-04 9.7646e-01 weaklyHypermeth 2.4602e-02 1.0000e+00 weaklyHypermeth 0.1248278 4.6808e-02 weaklyHypermeth 0.69981428 insignificant 0.9121523 0.370432 0.5050232 6 0.8524107 0.437947 0.41446402 1.4834e-17 9.9990e-01 hypermethylated 7.4168e-15 1.0000e+00 hypermethylated 1.1784e-08 9.9872e-01 hypermethylated 3.9279e-06 1.0000e+00 hypermethylated 0.4274611 1.1571e-04 hypermethylated 0.00608999 hypermethylated chr1 8643371 8644371 118 RERE ENSG00000142599 0.732950 129 5 0.7189108 209 5 0.578272 159 5 0.784524 35 5 0.862582 81 5 0.737407 141 5 0.8662286 185 5 0.750571 212 5 0.7710526 129 5 0.822721 158 5 0.825689 176 5 0.615393 143 5 0.876211 187 5 NA 0 0 0.8005232 187 5 0.684772 120 5 0.5714854 95 5 0.626087 76 5 0.837918 85 5 0.770935 175 5 0.764762 33 5 0.5500000 19 0 0.867672 234 5 0.875792 69 5 0.950000 16 0 0.7371246 199 5 0.814553 77 5 0.827848 51 5 0.754401 152 5 0.8273367 213 5 0.9333704 216 5 0.802969 193 5 0.3256015 250 5 0.3546053 124 5 NA 0 0 0.443939 35 2 0.2608897 83 5 0.4144379 188 5 0.732456 118 5 0.6970606 131 5 0.5608834 76 5 0.3811688 122 5 0.5292112 66 5 0.7237505 0.7071598 0.580972 0.806571 0.855417 0.732027 0.860784 0.7456399 0.7712612 0.820508 0.822761 0.6117280 0.863485 NA 0.7953458 0.6542516 0.5671046 0.6154028 0.8436964 0.7694671 0.762569 0.5271318 0.862813 0.8515644 0.9360465 0.7323118 0.7974417 0.8000675 0.7584128 0.819676 0.9254963 0.7925494 0.3112537 0.3538352 NA 0.4494362 0.2613298 0.4100423 0.7216034 0.6702972 0.5269014 0.3756418 0.4868875 2 0.745712 0.814538 -0.07104941 5 0.754646 0.829811 -7.5165e-02 0.99999693 0.00012388 weaklyHypometh 1.00000 0.041293 weaklyHypometh 0.99494150 0.00097777 weaklyHypometh 1.00000 0.139681 insignificant -0.05964885 0.12563339 lowCoverage 1.00000 lowCoverage 0.745712 0.3382353 0.4024148 5 0.754646 0.3495922 0.4050535 6.8113e-28 1.0000e+00 hypermethylated 3.0960e-26 1.0000e+00 hypermethylated 1.9382e-12 1.0000e+00 hypermethylated 1.2922e-10 1.0000e+00 hypermethylated 0.3892754 7.8154e-06 lowCoverage 3.0059e-04 lowCoverage 0.745712 0.571150 0.17840842 5 0.754646 0.587598 0.1670481 3.0050e-07 9.9999e-01 weaklyHypermeth 2.1464e-05 1.0000e+00 weaklyHypermeth 1.1278e-04 9.9633e-01 weaklyHypermeth 1.1278e-02 1.0000e+00 weaklyHypermeth 0.1690141 5.2220e-02 lowCoverage 6.3683e-01 lowCoverage 0.814538 0.3382353 0.47264206 5 0.829811 0.3495922 4.8022e-01 1.4891e-30 1.0000e+00 hypermethylated 8.7593e-29 1.0000e+00 hypermethylated 4.9432e-10 1.0000e+00 hypermethylated 2.9078e-08 1.0000e+00 hypermethylated 0.4489242 6.6800e-07 lowCoverage 5.1385e-05 lowCoverage 0.814538 0.571150 0.25308539 5 0.829811 0.587598 0.24221293 4.5874e-11 1.0000e+00 hypermethylated 7.6456e-09 1.0000e+00 hypermethylated 8.4664e-07 1.0000e+00 hypermethylated 2.1166e-04 1.0000e+00 hypermethylated 0.2286630 1.7247e-02 lowCoverage 0.37847367 lowCoverage 0.3382353 0.571150 -0.2174629 5 0.3495922 0.587598 -0.23800540 9.9986e-01 9.5987e-06 hypomethylated 1.0000e+00 1.7452e-04 hypomethylated 9.9952e-01 2.6794e-04 hypomethylated 1.0000e+00 7.0861e-03 hypomethylated -0.2202613 2.0999e-02 lowCoverage 0.21856003 lowCoverage chr1 8729771 8730771 128 RERE ENSG00000142599 0.662726 76 5 0.7385088 101 5 0.892857 16 0 0.493403 71 5 0.587778 35 4 0.720000 45 5 0.5137566 40 5 0.715897 57 5 0.6622222 37 5 0.793333 21 3 0.753394 114 5 0.380000 19 3 0.640000 28 5 0.4583333 28 2 0.7885714 43 5 0.733333 17 2 0.9000000 7 0 0.658303 78 4 0.700000 24 2 0.841848 58 5 0.625000 15 0 1.0000000 7 0 0.714902 38 2 0.767857 18 2 0.658824 43 2 0.7300000 83 5 0.757143 38 5 0.625000 8 0 0.681818 59 5 0.7743506 46 5 0.7211189 68 5 0.642222 80 5 0.4722222 75 5 0.7409524 28 5 0.5211039 50 5 0.833333 6 0 0.5170068 51 5 0.5981818 53 5 0.706993 83 5 0.7370034 87 5 0.7377240 88 5 0.7500000 30 2 0.5397889 71 5 0.6667485 0.7232434 0.861702 0.665009 0.579196 0.727660 0.604525 0.6926194 0.6657210 0.786525 0.752405 0.3638298 0.628369 0.4485816 0.7583587 0.6985816 0.8829787 0.7182609 0.7127660 0.8071963 0.726950 0.8539527 0.720818 0.7344225 0.6516479 0.7304965 0.7477204 0.6421693 0.6827853 0.877660 0.7186629 0.6757447 0.6371158 0.7102330 0.74903288 0.8014599 0.5476190 0.6023211 0.6984080 0.7408625 0.7199535 0.7387707 0.7361295 0 0.689617 0.703777 -0.01118697 5 0.630275 0.663721 -3.3446e-02 0.59908200 0.17834736 insignificant 1.00000 1.000000 insignificant 0.71695673 0.10871071 insignificant 1.00000 1.000000 insignificant -0.04313966 0.32352935 lowCoverage 1.00000 lowCoverage 0.689617 0.6045627 0.0783100 5 0.630275 0.5092559 0.1210188 4.1464e-04 8.6493e-01 weaklyHypermeth 3.2142e-03 1.0000e+00 weaklyHypermeth 1.2629e-02 8.5339e-01 weaklyHypermeth 1.0751e-01 1.0000e+00 insignificant 0.0679132 3.3552e-01 lowCoverage 1.0000e+00 lowCoverage 0.689617 0.693593 -0.01727233 5 0.630275 0.525775 0.1044997 6.5327e-01 5.9778e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.8343e-01 6.0066e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0125886 8.0721e-01 lowCoverage 1.0000e+00 lowCoverage 0.703777 0.6045627 0.09175648 5 0.663721 0.5092559 1.5447e-01 5.2572e-04 9.9462e-01 weaklyHypermeth 4.0440e-03 1.0000e+00 weaklyHypermeth 1.0632e-02 9.9648e-01 weaklyHypermeth 8.8188e-02 1.0000e+00 weaklyHypermeth 0.1110529 1.3009e-01 lowCoverage 8.2334e-01 lowCoverage 0.703777 0.693593 -0.00198153 5 0.663721 0.525775 0.13794592 8.9735e-01 8.9665e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.2036e-01 9.9053e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0305511 5.4938e-01 lowCoverage 1.00000000 lowCoverage 0.6045627 0.693593 -0.0942836 5 0.5092559 0.525775 -0.01651908 9.6169e-01 3.8977e-02 weaklyHypometh 1.0000e+00 2.2928e-01 insignificant 9.9011e-01 1.5103e-01 insignificant 1.0000e+00 8.6798e-01 insignificant -0.0805018 2.8470e-01 lowCoverage 1.00000000 lowCoverage chr1 9297871 9298871 136 SPSB1 ENSG00000171621 0.974127 178 7 0.9095238 40 3 0.758403 186 7 0.925043 134 7 0.947465 146 6 0.907224 221 7 0.8866213 154 6 0.876116 160 7 0.8965933 154 7 0.913106 173 7 0.972033 81 6 0.857143 72 4 0.916164 279 7 0.9364328 110 7 0.9351934 216 7 0.976190 83 5 0.5000000 11 0 0.630116 177 7 0.730159 17 2 0.886320 246 7 0.902282 69 5 0.7102195 90 5 0.906151 121 7 0.776650 198 7 0.833161 78 6 0.8497322 382 7 0.891199 138 7 0.884436 108 7 0.966588 160 7 0.9464093 400 7 0.9116638 382 7 0.940282 268 7 0.4871769 126 7 0.1871783 177 7 0.3874459 219 7 0.603175 33 4 0.3548080 264 7 0.9185597 310 7 0.827540 212 7 0.9087302 51 3 0.9380952 78 5 0.9153543 136 6 0.8631308 127 6 0.9780417 0.9463444 0.756773 0.921035 0.905220 0.892752 0.936007 0.8758100 0.8916767 0.925989 0.934141 0.9210526 0.900164 0.9392646 0.9302184 0.9589650 0.9087472 0.7160440 0.8474722 0.8807556 0.893734 0.7812081 0.930063 0.9113533 0.7762600 0.8430851 0.8539944 0.8849176 0.9408068 0.953353 0.9199447 0.9543248 0.4843747 0.1973652 0.43684211 0.8315789 0.4517494 0.9381380 0.8866828 0.8950742 0.9236842 0.9058317 0.8375125 3 0.906977 0.915205 -0.00502146 7 0.876611 0.853599 2.3012e-02 0.84614502 0.63453191 insignificant 1.00000 1.000000 insignificant 0.36075791 0.94272328 insignificant 1.00000 1.000000 insignificant -0.00986582 0.77836043 insignificant 1.00000 insignificant 0.906977 0.5668733 0.3384340 7 0.876611 0.4705743 0.4060370 6.8359e-18 1.0000e+00 hypermethylated 1.7528e-16 1.0000e+00 hypermethylated 1.7923e-07 1.0000e+00 hypermethylated 5.6010e-06 1.0000e+00 hypermethylated 0.3769748 1.3144e-02 weaklyHypermeth 1.6029e-01 insignificant 0.907198 0.890728 0.01697838 7 0.894699 0.872110 0.0225882 8.8359e-02 7.9783e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.5009e-01 6.6263e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0238715 4.8924e-01 insignificant 1.0000e+00 insignificant 0.915205 0.5668733 0.34313773 7 0.853599 0.4705743 3.8302e-01 4.1197e-14 1.0000e+00 hypermethylated 1.1444e-12 1.0000e+00 hypermethylated 7.3574e-06 1.0000e+00 hypermethylated 1.7945e-04 1.0000e+00 hypermethylated 0.3868406 1.2249e-02 weaklyHypermeth 1.4007e-01 insignificant 0.915552 0.890728 0.02092707 7 0.904113 0.872110 0.03200271 1.4038e-02 8.3291e-01 weaklyHypermeth 2.5523e-01 1.0000e+00 insignificant 3.5132e-01 3.9304e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0140057 6.3994e-01 insignificant 1.00000000 insignificant 0.5673759 0.890728 -0.3178599 7 0.5377992 0.872110 -0.33431121 1.0000e+00 1.3448e-05 hypomethylated 1.0000e+00 2.3592e-04 hypomethylated 9.9998e-01 9.5396e-04 hypomethylated 1.0000e+00 1.7666e-02 hypomethylated -0.4008462 1.0702e-02 weaklyHypometh 0.15073685 insignificant chr1 9302271 9303271 137 SPSB1 ENSG00000171621 0.593144 233 10 0.4652819 251 11 0.685183 116 8 0.399456 222 8 0.393330 158 11 0.727927 327 10 0.5341413 174 11 0.610580 228 10 0.5235281 169 11 0.550305 102 9 0.611398 394 11 0.439277 72 7 0.333344 273 11 0.4278409 40 5 0.3804361 173 11 0.544439 75 6 0.5847771 80 6 0.684206 321 9 0.478222 321 11 0.423949 330 11 0.665492 161 10 0.4333333 56 6 0.534413 216 10 0.528716 140 11 0.554286 109 6 0.4908688 342 11 0.526624 140 10 0.437172 90 10 0.599085 295 11 0.4459057 353 11 0.4340750 389 11 0.769798 271 11 0.8857565 252 11 0.8906080 289 11 0.6780627 293 10 0.922619 42 5 0.8095238 144 10 0.9691041 268 11 0.562628 305 10 0.6507630 328 11 0.3780454 231 8 0.4921327 294 7 0.5739615 295 11 0.5147921 0.3688869 0.550601 0.381085 0.320807 0.644549 0.426764 0.5352813 0.4863888 0.378400 0.574638 0.4481779 0.208337 0.3425817 0.2815987 0.3853848 0.3707984 0.6044068 0.3471932 0.3726286 0.691281 0.4068904 0.528534 0.4260874 0.4441084 0.3462768 0.4883426 0.4788058 0.4642787 0.349070 0.2801870 0.7507653 0.8413902 0.8390671 0.95860455 0.8650819 0.9010124 0.9528561 0.4107914 0.6425090 0.3428557 0.3747066 0.4601087 5 0.488166 0.488845 -0.00451088 11 0.522577 0.454437 6.8140e-02 0.96249644 0.64107210 insignificant 1.00000 1.000000 insignificant 0.97282758 0.41866205 insignificant 1.00000 1.000000 insignificant -0.01544250 0.69480856 insignificant 1.00000 insignificant 0.488039 0.9035019 -0.4092297 11 0.482792 0.8261542 -0.3433622 1.0000e+00 1.7193e-32 hypomethylated 1.0000e+00 4.2982e-30 hypomethylated 1.0000e+00 8.5146e-19 hypomethylated 1.0000e+00 2.8382e-16 hypomethylated -0.3397408 7.1845e-05 hypomethylated 2.2451e-03 hypomethylated 0.488160 0.502412 -0.03876470 10 0.526682 0.571803 -0.0451212 5.0021e-01 9.5395e-03 weaklyHypometh 1.0000e+00 2.0586e-01 insignificant 8.6167e-01 1.0520e-02 weaklyHypometh 1.0000e+00 2.6301e-01 insignificant -0.0119678 8.2587e-01 insignificant 1.0000e+00 insignificant 0.489437 0.9020979 -0.39942018 11 0.564835 0.7081322 -1.4330e-01 1.0000e+00 1.0421e-22 hypomethylated 1.0000e+00 2.6052e-20 hypomethylated 1.0000e+00 1.3851e-13 hypomethylated 1.0000e+00 3.4627e-11 hypomethylated -0.3242983 8.5705e-05 hypomethylated 2.8568e-03 hypomethylated 0.489428 0.502755 -0.03173613 10 0.575641 0.607486 -0.03184581 4.5957e-01 1.2058e-02 weaklyHypometh 1.0000e+00 3.4451e-01 insignificant 5.1228e-01 1.0934e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0034747 9.5097e-01 insignificant 1.00000000 insignificant 0.9027994 0.502409 0.4121143 10 0.7626039 0.560757 0.20184721 9.1160e-15 1.0000e+00 hypermethylated 3.0387e-12 1.0000e+00 hypermethylated 4.9203e-09 9.9999e-01 hypermethylated 2.4601e-06 1.0000e+00 hypermethylated 0.3277730 5.8652e-04 hypermethylated 0.02172280 hypermethylated chr1 9543571 9544571 144 SLC25A33 ENSG00000171612 0.853074 125 5 0.8807875 122 5 0.713871 145 5 0.952381 66 5 0.796364 51 5 0.851335 211 5 0.8580952 124 5 0.830247 83 5 0.8391640 132 5 0.923130 93 5 0.880605 173 5 0.822712 85 5 0.890662 157 5 NA 0 0 0.8620690 152 5 0.784706 71 5 0.7579088 82 5 0.828442 80 5 0.870249 120 5 0.901077 156 5 0.866667 37 3 0.8200000 27 2 0.866583 183 5 0.850943 66 5 0.866667 32 4 0.8731225 156 5 0.924496 66 5 0.909206 44 5 0.878228 101 5 0.8772448 184 5 0.8811044 135 5 0.886888 268 5 0.7818005 137 5 0.8761905 84 5 0.8750000 189 5 0.860000 22 2 0.7222306 67 5 0.8632957 140 5 0.881876 124 5 0.8962500 158 5 0.8735178 90 5 0.9373016 112 5 0.8439684 111 5 0.8495721 0.8707230 0.705176 0.945139 0.775995 0.836338 0.840301 0.8177685 0.8236272 0.911441 0.872593 0.8045465 0.877007 NA 0.8410933 0.7595554 0.7459069 0.8150440 0.8562172 0.8860333 0.846390 0.7926267 0.857912 0.8400054 0.8463902 0.8587640 0.9208572 0.9092239 0.8643182 0.863781 0.8663151 0.8772581 0.7685807 0.8573623 0.85599078 0.8617512 0.7149152 0.8476270 0.8728094 0.8883929 0.8542832 0.9300710 0.8350129 5 0.834829 0.852194 -0.02334794 5 0.851673 0.872992 -2.1319e-02 0.98711363 0.10044312 insignificant 1.00000 1.000000 insignificant 0.99364116 0.02560020 weaklyHypometh 1.00000 0.752947 insignificant -0.02789158 0.07586404 lowCoverage 1.00000 lowCoverage 0.834829 0.8372457 0.0094829 5 0.851673 0.8435167 0.0081563 5.1025e-01 7.8204e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.5678e-01 5.3828e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0174513 5.6449e-01 lowCoverage 1.0000e+00 lowCoverage 0.834829 0.873950 -0.03985797 5 0.851673 0.887247 -0.0355739 9.8583e-01 4.6805e-02 weaklyHypometh 1.0000e+00 6.6864e-01 insignificant 9.7969e-01 3.6823e-02 weaklyHypometh 1.0000e+00 5.8023e-01 insignificant -0.0393785 7.6747e-02 lowCoverage 7.4512e-01 lowCoverage 0.852194 0.8372457 0.03284374 5 0.872992 0.8435167 2.9475e-02 8.0211e-02 9.5907e-01 insignificant 3.7835e-01 1.0000e+00 insignificant 2.0495e-01 9.5622e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0453429 1.4485e-01 lowCoverage 8.9416e-01 lowCoverage 0.852194 0.873950 -0.01777958 5 0.872992 0.887247 -0.01425527 8.7622e-01 1.9821e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.6683e-01 5.6795e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0114869 5.2581e-01 lowCoverage 1.00000000 lowCoverage 0.8372457 0.873950 -0.0466017 5 0.8435167 0.887247 -0.04373017 9.5717e-01 1.4624e-02 weaklyHypometh 1.0000e+00 1.0017e-01 insignificant 8.9981e-01 2.1533e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0568298 9.5875e-02 lowCoverage 0.63075369 lowCoverage chr1 10698971 10699971 174 ENSG00000209421 0.811336 348 8 0.8656670 268 8 0.789213 227 8 0.879706 333 7 0.905569 147 8 0.882350 472 8 0.7781315 216 8 0.823389 176 8 0.7723939 164 8 0.937503 112 6 0.784144 344 8 0.928369 98 6 0.827656 187 5 0.8500000 41 3 0.8450739 121 5 0.785937 72 6 0.8134921 43 3 0.783263 287 8 0.907086 238 8 0.755915 331 8 0.891770 138 8 0.8020833 17 0 0.838597 180 8 0.892995 94 7 0.929613 123 4 0.8161305 291 8 0.812620 160 8 0.949315 92 6 0.827981 274 8 0.8435108 302 8 0.8148383 302 8 0.863556 381 8 0.6122850 287 8 0.4408914 267 8 0.4817308 282 8 0.666667 14 1 0.5918955 251 8 0.7591325 295 8 0.815172 301 7 0.8244293 336 8 0.8128113 258 7 0.6467963 161 5 0.7118687 266 7 0.8352552 0.8357222 0.775542 0.892604 0.897443 0.915850 0.808145 0.8349752 0.8148429 0.951778 0.895513 0.9307614 0.848011 0.8896475 0.8451450 0.8232906 0.8062006 0.7968640 0.9105001 0.8644003 0.904407 0.7934473 0.871081 0.8532450 0.9571632 0.8080932 0.8148557 0.9271417 0.8427037 0.868524 0.8397743 0.8900913 0.6444666 0.4145300 0.58251151 0.6890494 0.7080062 0.7570472 0.8421546 0.8448112 0.8074476 0.8116278 0.7811512 3 0.852308 0.837723 0.00655998 8 0.753400 0.859022 -1.0562e-01 0.39099047 0.56241728 insignificant 1.00000 1.000000 insignificant 0.84845733 0.13520927 insignificant 1.00000 1.000000 insignificant -0.02060769 0.28346358 insignificant 1.00000 insignificant 0.852308 0.5924069 0.2473259 8 0.753400 0.5307668 0.2226331 1.2926e-18 1.0000e+00 hypermethylated 3.6933e-17 1.0000e+00 hypermethylated 4.0073e-05 9.9991e-01 hypermethylated 7.0304e-04 1.0000e+00 hypermethylated 0.2442095 3.0428e-03 weaklyHypermeth 5.0713e-02 weaklyHypermeth 0.852308 0.815431 0.04826299 8 0.753400 0.698757 0.0546428 5.7132e-04 9.7851e-01 weaklyHypermeth 1.8976e-02 1.0000e+00 weaklyHypermeth 2.9279e-02 9.8161e-01 weaklyHypermeth 6.9243e-01 1.0000e+00 insignificant 0.0740943 1.0508e-01 insignificant 9.4479e-01 insignificant 0.837723 0.5924069 0.23859811 8 0.859022 0.5307668 3.2826e-01 1.6621e-12 1.0000e+00 hypermethylated 3.7775e-11 1.0000e+00 hypermethylated 1.2563e-04 9.9934e-01 hypermethylated 2.0263e-03 1.0000e+00 hypermethylated 0.2648172 1.9464e-03 weaklyHypermeth 3.3558e-02 weaklyHypermeth 0.837723 0.815431 0.05484470 8 0.859022 0.698757 0.16026520 1.5446e-03 9.9129e-01 weaklyHypermeth 4.4954e-02 1.0000e+00 weaklyHypermeth 6.7016e-03 9.9352e-01 weaklyHypermeth 2.1763e-01 1.0000e+00 insignificant 0.0947020 5.2646e-02 insignificant 0.75209004 insignificant 0.5924069 0.815431 -0.1609658 8 0.5307668 0.698757 -0.16799032 9.9912e-01 2.3191e-04 weaklyHypometh 1.0000e+00 2.8988e-03 weaklyHypometh 9.9714e-01 7.5801e-02 insignificant 1.0000e+00 4.8590e-01 insignificant -0.1701152 1.9582e-02 weaklyHypometh 0.21285161 insignificant chr1 10708871 10709871 175 ENSG00000209421 0.897819 271 7 0.6457272 311 9 0.672682 300 7 0.987837 116 6 0.698819 150 8 0.924735 342 7 0.6581759 210 8 0.706537 265 8 0.7947201 212 8 0.700697 216 8 0.703802 338 7 0.672568 179 8 0.751958 250 8 0.5708061 54 2 0.7002521 246 8 0.692593 70 6 0.6783951 82 7 0.919419 170 7 0.705145 192 8 0.899675 252 7 0.749434 125 7 0.8791887 55 4 0.856561 165 7 0.664815 91 6 0.873434 34 2 0.7304823 280 7 0.923313 128 6 0.628608 96 4 0.669595 253 7 0.7037263 329 8 0.7091547 305 7 0.789316 423 7 0.7144812 220 7 0.5258294 239 8 0.6363092 185 6 0.839316 44 4 0.6963324 173 7 0.8134295 306 7 0.759792 132 7 0.8620981 177 7 0.8265840 116 7 0.7373276 198 6 0.7497768 149 7 0.9104839 0.8467634 0.866019 0.979939 0.867142 0.934886 0.817944 0.8930168 0.9154259 0.856041 0.907052 0.8530515 0.922649 0.8852410 0.9026778 0.8643145 0.8212142 0.9329102 0.9319531 0.8982778 0.913995 0.7841142 0.965923 0.9023522 0.8833829 0.9013214 0.9129844 0.7939655 0.8656929 0.909737 0.8775196 0.9277266 0.8383013 0.7286707 0.81695909 0.8571696 0.8958294 0.9289473 0.8770539 0.8853503 0.8805186 0.9373671 0.8604119 3 0.856365 0.893029 -0.01154841 7 0.700533 0.731640 -3.1107e-02 0.97710849 0.09856663 insignificant 1.00000 1.000000 insignificant 0.72655953 0.06781254 insignificant 1.00000 1.000000 insignificant -0.01568410 0.68332474 insignificant 1.00000 insignificant 0.856365 0.8423308 0.0435666 7 0.700533 0.6456994 0.0548334 6.6035e-03 9.9941e-01 weaklyHypermeth 3.9074e-02 1.0000e+00 weaklyHypermeth 1.1109e-01 9.0894e-01 insignificant 6.0048e-01 1.0000e+00 insignificant 0.0448352 4.2700e-01 insignificant 1.0000e+00 insignificant 0.856365 0.888601 0.00654885 7 0.700533 0.734943 -0.0344107 2.3715e-01 9.6271e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 1.6595e-01 4.7410e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0379976 2.9889e-01 insignificant 1.0000e+00 insignificant 0.893029 0.8423308 0.05754541 7 0.731640 0.6456994 8.5940e-02 9.4273e-03 9.9986e-01 weaklyHypermeth 5.5783e-02 1.0000e+00 weaklyHypermeth 1.2907e-01 9.9788e-01 insignificant 6.8293e-01 1.0000e+00 insignificant 0.0605193 3.0035e-01 insignificant 1.0000e+00 insignificant 0.893029 0.888601 0.01570988 7 0.731640 0.734943 -0.00330360 1.7573e-01 8.6567e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.8785e-01 9.5875e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0223135 5.5882e-01 insignificant 1.00000000 insignificant 0.8423308 0.888601 -0.0456890 7 0.6456994 0.734943 -0.08924409 9.9735e-01 1.7639e-01 insignificant 1.0000e+00 8.2043e-01 insignificant 9.7970e-01 4.9415e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0828328 1.6044e-01 insignificant 0.93826526 insignificant chr1 11689971 11690971 181 C1orf187 ENSG00000162490 0.953612 161 6 0.8645348 221 6 0.766564 192 6 0.938475 111 6 0.864430 153 6 0.925220 244 6 0.8966856 151 6 0.916452 272 6 0.9091638 174 6 0.877934 203 6 0.916226 170 6 0.872982 70 6 0.904692 175 6 0.8686144 138 6 0.8736331 209 6 0.795227 73 6 0.8749261 193 6 0.934574 121 6 0.904601 167 6 0.915626 152 6 0.768519 48 6 0.8816138 79 6 0.943768 142 6 0.918841 152 6 0.839683 29 3 0.9032265 204 6 0.900910 132 6 0.906729 126 6 0.948858 133 6 0.9212302 254 6 0.8920210 196 6 0.927330 219 6 0.6837189 170 6 0.3424242 43 6 0.9866559 294 4 0.500000 16 0 0.5031215 140 6 0.8470379 118 6 0.898737 66 6 0.8625865 65 6 0.9111111 71 6 0.8649351 55 6 0.8179968 109 6 0.9508897 0.8693532 0.771626 0.936954 0.857804 0.922150 0.893271 0.9201661 0.9073130 0.877462 0.913461 0.8691889 0.904650 0.8660318 0.8761735 0.7942220 0.8893798 0.9406553 0.9081761 0.9109842 0.752494 0.8879592 0.943815 0.9148591 0.8454422 0.9074936 0.9004439 0.9039161 0.9440197 0.920311 0.8955816 0.9281031 0.6682881 0.3130983 0.89659254 0.5000000 0.5007141 0.8497460 0.9046320 0.8625153 0.9178231 0.8720965 0.8111673 6 0.894328 0.910735 -0.01624606 6 0.892887 0.910644 -1.7757e-02 0.95083042 0.10003984 insignificant 1.00000 1.000000 insignificant 0.69954989 0.09908534 insignificant 1.00000 1.000000 insignificant -0.00735205 0.67967431 insignificant 1.00000 insignificant 0.894328 0.7618438 0.1335651 6 0.892887 0.7443303 0.1485568 1.0107e-07 1.0000e+00 weaklyHypermeth 1.2478e-06 1.0000e+00 weaklyHypermeth 5.9566e-06 1.0000e+00 weaklyHypermeth 1.3237e-04 1.0000e+00 weaklyHypermeth 0.2448822 5.5498e-02 lowCoverage 4.9113e-01 lowCoverage 0.894328 0.871585 0.02241810 6 0.892887 0.869583 0.0233039 1.9947e-01 8.7083e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.4508e-01 8.8478e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0176352 3.8678e-01 insignificant 1.0000e+00 insignificant 0.910735 0.7618438 0.14815805 6 0.910644 0.7443303 1.6631e-01 3.5395e-08 9.9999e-01 weaklyHypermeth 5.3629e-07 1.0000e+00 weaklyHypermeth 5.1129e-06 1.0000e+00 weaklyHypermeth 1.2782e-04 1.0000e+00 weaklyHypermeth 0.2522342 5.0515e-02 lowCoverage 4.2952e-01 lowCoverage 0.910735 0.871585 0.03921995 6 0.910644 0.869583 0.04106073 2.9459e-02 9.8483e-01 weaklyHypermeth 4.9098e-01 1.0000e+00 insignificant 9.1848e-02 9.2217e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0249873 2.7490e-01 insignificant 1.00000000 insignificant 0.7618438 0.871585 -0.1207853 6 0.7443303 0.869583 -0.12525293 9.9706e-01 6.8077e-03 weaklyHypometh 1.0000e+00 5.1967e-02 weaklyHypometh 9.9922e-01 1.0320e-03 weaklyHypometh 1.0000e+00 1.8429e-02 weaklyHypometh -0.2272470 6.9395e-02 lowCoverage 0.51787498 lowCoverage chr1 11769571 11770571 187 C1orf167 ENSG00000215910 0.427026 469 11 0.4687775 447 11 0.530516 275 11 0.363721 538 11 0.470028 151 10 0.623721 564 11 0.3982385 328 12 0.487530 312 11 0.3506495 320 9 0.381350 246 10 0.511065 493 12 0.362554 112 8 0.223133 296 11 0.5051967 233 11 0.3146325 296 11 0.515476 112 11 0.2664251 56 4 0.318887 528 11 0.214458 338 11 0.530278 334 10 0.399829 149 11 0.2618341 186 8 0.492232 258 11 0.344880 227 10 0.488066 690 12 0.3993285 655 12 0.272917 200 8 0.391770 210 8 0.442962 259 10 0.5737998 554 11 0.2334276 663 12 0.451297 568 12 0.0749794 353 12 0.1908877 255 12 0.2009363 423 11 0.142735 216 9 0.1638651 416 11 0.3172845 635 12 0.394908 506 12 0.5154082 499 11 0.4740305 421 11 0.4560194 390 10 0.3433938 420 12 0.5754383 0.5935311 0.637518 0.535183 0.524638 0.754677 0.574642 0.6525260 0.4792991 0.599514 0.647136 0.5105017 0.346483 0.6077975 0.4665593 0.6413776 0.3136008 0.5306864 0.3640016 0.5792813 0.551969 0.4457117 0.738340 0.5496165 0.6331052 0.5535727 0.4806442 0.5126499 0.5756867 0.641804 0.3751546 0.6432616 0.1720003 0.3016982 0.34350983 0.1546301 0.2236996 0.3742949 0.4814543 0.6808477 0.6233130 0.5530912 0.4793416 7 0.491625 0.418928 0.00774820 12 0.427546 0.458450 -3.0904e-02 0.49283215 0.93882540 insignificant 1.00000 1.000000 insignificant 0.74027368 0.83653482 insignificant 1.00000 1.000000 insignificant 0.01715455 0.66292727 insignificant 1.00000 insignificant 0.491775 0.1761116 0.2432171 12 0.452910 0.1707763 0.2821336 1.1304e-17 9.9983e-01 hypermethylated 2.8261e-16 1.0000e+00 hypermethylated 4.9139e-12 1.0000e+00 hypermethylated 3.0712e-10 1.0000e+00 hypermethylated 0.2314019 1.3023e-04 hypermethylated 3.4271e-03 hypermethylated 0.491770 0.467800 -0.00949959 12 0.417284 0.419750 -0.0024662 3.0538e-01 2.2021e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.8581e-01 3.4942e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0235689 5.6206e-01 insignificant 1.0000e+00 insignificant 0.418458 0.1762402 0.20477118 12 0.411575 0.2119293 1.9965e-01 2.1459e-15 9.9997e-01 hypermethylated 6.7060e-14 1.0000e+00 hypermethylated 8.9915e-09 1.0000e+00 hypermethylated 4.0870e-07 1.0000e+00 hypermethylated 0.2142473 3.3777e-04 hypermethylated 7.8552e-03 hypermethylated 0.418534 0.467800 -0.02254571 12 0.402933 0.419750 -0.01681659 4.3668e-01 6.6880e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 6.2524e-01 1.6255e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0407234 3.5761e-01 insignificant 1.00000000 insignificant 0.1766506 0.467800 -0.2376683 12 0.1992390 0.419750 -0.22051089 1.0000e+00 4.5845e-11 hypomethylated 1.0000e+00 2.0839e-09 hypomethylated 1.0000e+00 3.9521e-09 hypomethylated 1.0000e+00 7.8338e-07 hypomethylated -0.2549708 2.8975e-04 hypomethylated 0.01207300 hypomethylated chr1 12035671 12036671 202 ENSG00000209447 0.900382 238 4 0.8067610 187 6 0.685714 73 6 0.811228 211 4 0.525253 31 2 0.917001 257 6 0.6368687 30 2 0.749238 174 6 0.8436905 125 4 0.667447 127 6 0.760059 195 7 0.777778 18 0 0.919893 299 6 0.7536164 115 4 0.8330603 141 6 NA 0 0 0.6041667 17 2 0.642798 274 4 0.926376 154 6 0.916420 195 6 0.818878 76 6 0.8872077 103 4 0.896566 111 4 0.859498 87 4 0.808333 69 4 0.8289546 294 6 0.674823 102 6 0.560967 32 4 0.749688 202 4 0.8224954 244 6 0.8932449 246 6 0.950674 265 6 0.2493386 203 6 0.4325923 141 6 0.5000000 51 3 0.650000 15 1 0.5584252 107 6 0.7558098 251 6 0.894772 80 4 0.8738272 209 6 0.7524917 109 4 0.7520819 117 4 0.6070851 138 4 0.8141337 0.8206174 0.730997 0.714898 0.759558 0.879672 0.595327 0.7505192 0.7879172 0.775105 0.760961 0.7570093 0.894799 0.7239465 0.7618506 NA 0.7219626 0.8004973 0.9028815 0.9351824 0.952214 0.8111289 0.865469 0.7565814 0.7952381 0.8093824 0.5158794 0.6063640 0.6703770 0.809595 0.9030409 0.9113052 0.1841900 0.3674555 0.32446328 0.3785047 0.3740258 0.6956617 0.8685711 0.8013028 0.6459776 0.6561021 0.6328390 2 0.806925 0.780448 0.02571956 6 0.807642 0.841253 -3.3611e-02 0.75806012 0.07569430 insignificant 1.00000 1.000000 insignificant 0.93291223 0.16900045 insignificant 1.00000 1.000000 insignificant -0.04009762 0.34274061 lowCoverage 1.00000 lowCoverage 0.806925 0.4791667 0.3410008 6 0.807642 0.4939372 0.3137045 1.1148e-14 1.0000e+00 hypermethylated 2.3224e-13 1.0000e+00 hypermethylated 1.5272e-04 9.9953e-01 hypermethylated 2.2459e-03 1.0000e+00 hypermethylated 0.2481522 1.6058e-02 lowCoverage 1.8891e-01 lowCoverage 0.806925 0.738132 0.07133770 4 0.807642 0.826006 -0.0183643 1.0205e-02 7.6952e-01 lowCoverage 2.0827e-01 1.0000e+00 lowCoverage 2.7955e-01 7.1282e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0035383 9.5361e-01 lowCoverage 1.0000e+00 lowCoverage 0.780448 0.4791667 0.32126455 6 0.841253 0.4939372 3.4732e-01 6.8301e-12 9.9999e-01 hypermethylated 1.3939e-10 1.0000e+00 hypermethylated 3.3837e-05 9.9994e-01 hypermethylated 6.2661e-04 1.0000e+00 hypermethylated 0.2882498 8.0082e-03 lowCoverage 1.0267e-01 lowCoverage 0.780448 0.738132 0.04546736 4 0.841253 0.826006 0.01524716 2.7331e-03 8.0499e-01 lowCoverage 6.8328e-02 1.0000e+00 lowCoverage 1.4155e-01 7.8070e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0365593 5.6291e-01 lowCoverage 1.00000000 lowCoverage 0.4791667 0.738132 -0.2691889 4 0.4939372 0.826006 -0.33206880 9.9999e-01 4.9631e-04 lowCoverage 1.0000e+00 5.8113e-03 lowCoverage 9.9976e-01 4.2392e-03 lowCoverage 1.0000e+00 5.8072e-02 lowCoverage -0.2516905 2.0152e-02 lowCoverage 0.21668335 lowCoverage chr1 12129771 12130771 206 ENSG00000197413 0.715506 370 7 0.6991690 235 7 0.804984 138 7 0.654061 352 7 0.714556 99 7 0.794956 400 6 0.7412551 80 6 0.684464 229 7 0.7603281 148 7 0.728831 106 7 0.834524 267 7 0.642857 26 2 0.809050 237 7 0.7936252 125 7 0.8348374 206 7 0.739103 40 3 0.1666667 4 0 0.736555 484 7 0.834591 217 7 0.809416 337 6 0.684488 86 7 0.6523237 107 6 0.589438 203 7 0.811728 81 7 0.749852 88 6 0.7783441 254 7 0.674144 160 8 0.664708 86 5 0.680619 247 7 0.6326993 296 7 0.7560415 237 8 0.703916 342 8 0.8247349 167 7 0.7556800 162 6 0.9259259 95 5 0.111111 6 0 0.7410229 140 8 0.6647558 270 5 0.733961 210 6 0.6795733 291 7 0.6963221 284 6 0.6255162 297 6 0.6293855 279 6 0.8254077 0.8052737 0.887182 0.805622 0.837389 0.840090 0.869945 0.7950395 0.7873376 0.862618 0.894678 0.5632184 0.846789 0.8465919 0.8609584 0.7794725 0.7325868 0.7667635 0.8497790 0.8750001 0.872788 0.7075105 0.787188 0.7836526 0.7085050 0.8520565 0.7887659 0.8360607 0.7871087 0.782942 0.8122157 0.9057581 0.8747550 0.8723304 0.92855580 0.7661581 0.8869925 0.7652197 0.7624354 0.8436191 0.7679856 0.7258492 0.7156059 1 0.831463 0.803841 0.01699331 7 0.779906 0.740445 3.9461e-02 0.25915732 0.99335650 insignificant 1.00000 1.000000 insignificant 0.07825897 0.99662556 insignificant 1.00000 1.000000 insignificant 0.02677496 0.47759790 insignificant 1.00000 insignificant 0.831422 0.8452381 -0.0201890 7 0.759897 0.7438175 0.0160799 3.2710e-01 2.7254e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.1047e-01 2.5234e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0544284 6.7134e-01 insignificant 1.0000e+00 insignificant 0.831422 0.793534 0.06326628 6 0.759897 0.662389 0.0975088 3.3067e-03 9.4162e-01 weaklyHypermeth 8.8997e-02 1.0000e+00 weaklyHypermeth 1.2341e-02 9.9423e-01 weaklyHypermeth 3.5261e-01 1.0000e+00 insignificant 0.0520152 1.8786e-01 insignificant 1.0000e+00 insignificant 0.803751 0.8452381 -0.03790196 7 0.716849 0.7438175 -2.6969e-02 8.0849e-01 1.7662e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 7.9106e-01 1.0534e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0276534 8.2498e-01 insignificant 1.0000e+00 insignificant 0.803751 0.793534 0.06115440 6 0.716849 0.662389 0.05446039 3.7250e-02 7.3889e-01 weaklyHypermeth 5.8203e-01 1.0000e+00 insignificant 1.0833e-01 8.5625e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0252402 3.8312e-01 insignificant 1.00000000 insignificant 0.8452381 0.793534 0.0815975 6 0.7438175 0.662389 0.08142895 3.8476e-02 8.0475e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 8.5976e-02 8.8956e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0024132 9.8460e-01 insignificant 1.00000000 insignificant chr1 12201571 12202571 214 TNFRSF1B ENSG00000028137 0.666320 97 5 0.5998851 99 5 0.598810 35 5 0.720987 84 5 0.601818 38 3 0.707190 64 5 0.4277778 55 5 0.668485 56 5 0.6333333 21 2 0.900000 20 1 0.645714 101 5 0.573333 11 1 0.605000 55 5 0.7142857 47 5 0.7300000 22 2 0.666667 11 0 0.6250000 10 0 0.571557 94 5 0.787500 37 2 0.720000 58 5 0.683333 15 0 1.0000000 3 0 0.695000 34 2 0.590476 24 2 0.734921 59 5 0.6404762 66 5 0.715000 23 2 0.560000 23 3 0.571795 61 2 0.6328205 111 5 0.6563025 55 5 0.712078 84 5 0.4626263 49 2 0.5555556 54 5 0.5792105 80 5 0.600000 9 0 0.6009768 43 5 0.6553846 79 5 0.640166 67 5 0.6780303 90 5 0.7099678 99 5 0.6852381 50 2 0.7125000 75 5 0.6530803 0.5998232 0.601648 0.693726 0.609790 0.707642 0.467521 0.6834499 0.6410256 0.815385 0.620330 0.5230769 0.603846 0.7142857 0.7000000 0.6410256 0.6739341 0.5654807 0.7500000 0.6717949 0.717949 0.8037008 0.694231 0.5750916 0.7020757 0.6300366 0.6480769 0.5269231 0.5552268 0.635503 0.6232493 0.7257243 0.5023310 0.5170940 0.57763158 0.5384615 0.5957547 0.6195266 0.6295588 0.6847319 0.6789564 0.6734432 0.7115385 0 0.646594 0.659498 -0.00400108 5 0.647622 0.653186 -5.5643e-03 0.47238255 0.52745833 insignificant 1.00000 1.000000 insignificant 0.43682638 0.62782853 insignificant 1.00000 1.000000 insignificant -0.02450040 0.54364858 lowCoverage 1.00000 lowCoverage 0.646594 0.5923567 0.0616471 5 0.647622 0.5916706 0.0559510 1.3376e-02 9.6637e-01 weaklyHypermeth 7.2698e-02 1.0000e+00 weaklyHypermeth 1.2686e-02 9.5420e-01 weaklyHypermeth 1.0751e-01 1.0000e+00 insignificant 0.0825575 3.1216e-02 lowCoverage 3.2517e-01 lowCoverage 0.646594 0.698163 -0.03996800 5 0.647622 0.688537 -0.0409153 9.5986e-01 1.7387e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.8776e-01 4.8356e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0269972 2.9635e-01 lowCoverage 1.0000e+00 lowCoverage 0.659498 0.5923567 0.06466290 5 0.653186 0.5916706 6.1515e-02 3.7893e-02 9.8404e-01 weaklyHypermeth 1.9235e-01 1.0000e+00 insignificant 3.7576e-02 9.9463e-01 weaklyHypermeth 2.4243e-01 1.0000e+00 insignificant 0.1070579 2.2913e-02 lowCoverage 2.2701e-01 lowCoverage 0.659498 0.698163 -0.03623567 5 0.653186 0.688537 -0.03535100 9.5581e-01 1.2589e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.2576e-01 2.8181e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0024969 9.4537e-01 lowCoverage 1.00000000 lowCoverage 0.5923567 0.698163 -0.1018137 5 0.5916706 0.688537 -0.09686631 9.9916e-01 4.6110e-03 weaklyHypometh 1.0000e+00 3.7185e-02 weaklyHypometh 9.8812e-01 6.3282e-03 weaklyHypometh 1.0000e+00 8.1131e-02 weaklyHypometh -0.1095547 6.9769e-03 lowCoverage 0.11437533 lowCoverage chr1 12531671 12532671 237 ENSG00000209463 0.878483 126 7 0.8354701 95 7 0.414861 121 7 0.782118 99 9 0.833333 38 4 0.962706 180 10 0.6000000 13 1 0.945833 64 6 0.8125000 22 1 0.909048 51 4 0.852258 176 9 0.283333 10 1 0.830251 118 8 0.9761905 32 5 0.8489583 31 1 0.833333 5 0 0.6071429 9 1 0.729867 197 10 0.883700 171 8 0.802311 164 9 0.770940 68 7 0.2833333 10 1 0.720386 68 6 1.000000 31 2 0.666667 8 0 0.8500000 103 7 0.717057 140 9 0.392857 15 1 0.678741 217 8 0.7062105 141 7 0.9119891 231 8 0.914703 123 9 0.0549625 254 10 0.1159335 134 7 0.0218750 293 8 1.000000 1 0 0.1599512 133 9 0.6365576 286 10 0.751273 83 6 0.9034773 142 9 0.9791667 66 6 0.7754079 78 8 0.6992063 81 10 0.9465241 0.9772727 0.588307 0.916883 1.000000 0.962882 1.000000 0.9772727 0.9772727 0.990909 0.810606 0.7575758 0.868687 NA 0.8627012 0.9696970 0.6948052 0.6473829 0.9763376 0.9354469 0.772727 0.7575758 0.958678 1.0000000 0.9696970 1.0000000 0.8549784 0.8701299 0.8461511 0.902597 0.9521531 0.8994626 0.0356506 0.0000000 0.02545455 0.2714055 0.0777778 0.8254174 0.7707071 0.7878788 0.8863636 0.7995338 0.9545455 0 0.867519 0.888307 -0.01541146 9 0.775411 0.767097 8.3148e-03 0.88127799 0.51918300 insignificant 1.00000 1.000000 insignificant 0.79878662 0.76770833 insignificant 1.00000 1.000000 insignificant 0.06334455 0.38935502 insignificant 1.00000 insignificant 0.867519 0.2352407 0.6344338 9 0.775411 0.1886388 0.5867726 1.8237e-39 1.0000e+00 hypermethylated 1.1398e-37 1.0000e+00 hypermethylated 1.7066e-13 1.0000e+00 hypermethylated 2.1477e-11 1.0000e+00 hypermethylated 0.4495382 3.8328e-02 weaklyHypermeth 3.7949e-01 insignificant 0.867596 0.857143 0.00359419 9 0.791453 0.839686 -0.0482323 7.5509e-01 6.0856e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.0045e-01 6.8402e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0406214 5.4884e-01 insignificant 1.0000e+00 insignificant 0.888307 0.2352407 0.64768632 10 0.767097 0.1886388 5.7846e-01 4.9316e-29 1.0000e+00 hypermethylated 2.7398e-27 1.0000e+00 hypermethylated 3.1513e-10 1.0000e+00 hypermethylated 2.1008e-08 1.0000e+00 hypermethylated 0.3861937 6.4039e-02 insignificant 5.1662e-01 insignificant 0.887826 0.857143 0.01848137 10 0.775928 0.850373 -0.07444519 7.2718e-01 5.8131e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4972e-01 6.5532e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.1039660 2.1175e-01 insignificant 1.00000000 insignificant 0.2352407 0.856502 -0.6345276 10 0.1886388 0.827354 -0.63871502 1.0000e+00 1.8597e-18 hypomethylated 1.0000e+00 2.0663e-16 hypomethylated 1.0000e+00 4.7003e-09 hypomethylated 1.0000e+00 7.8338e-07 hypomethylated -0.4901596 2.8065e-02 weaklyHypometh 0.27247536 insignificant chr1 12562871 12563871 240 ENSG00000221340 0.940747 158 8 0.8706711 379 8 0.891392 312 8 0.800649 60 4 0.931384 177 8 0.809581 192 8 0.8507086 257 8 0.863029 268 8 0.8272953 219 8 0.901713 239 8 0.908816 320 8 0.747438 154 8 0.951339 440 8 NA 0 0 0.9428426 208 8 0.726389 95 5 0.7998620 139 8 0.900838 92 6 0.923052 323 8 0.851126 184 5 0.876358 163 8 0.9224703 42 3 0.913044 211 8 0.845355 160 8 0.875000 23 2 0.8758093 293 8 0.823718 88 8 0.802721 121 6 0.850356 351 8 0.9523759 395 8 0.9313222 331 8 0.921634 318 8 0.3077981 415 8 0.1812837 223 8 0.5500995 312 6 0.016129 64 3 0.7714181 150 8 0.0723986 461 8 0.841826 158 5 0.8627193 181 5 0.9584936 68 3 0.9576201 133 4 0.9517512 97 3 0.9120936 0.8609909 0.894401 0.917728 0.928679 0.928127 0.880397 0.8641821 0.8762050 0.909848 0.906893 0.8198476 0.928980 NA 0.9407908 0.7847752 0.8403061 0.9037466 0.9058650 0.9016801 0.893703 0.8263539 0.916666 0.9543576 0.9242615 0.8800625 0.8576154 0.8609910 0.8973253 0.940436 0.9158679 0.9117819 0.2673543 0.1418411 0.62503233 0.0596126 0.8553010 0.0305154 0.9432779 0.8937640 0.9034351 0.9066073 0.8670483 3 0.894162 0.897436 -0.00429070 8 0.906486 0.909899 -3.4125e-03 0.68475786 0.47013204 insignificant 1.00000 1.000000 insignificant 0.84898909 0.48442528 insignificant 1.00000 1.000000 insignificant -0.01730974 0.39941101 insignificant 1.00000 insignificant 0.894137 0.2996923 0.5957470 8 0.894797 0.3034843 0.5913125 2.1148e-52 1.0000e+00 hypermethylated 3.0211e-50 1.0000e+00 hypermethylated 8.1648e-13 1.0000e+00 hypermethylated 5.8320e-11 1.0000e+00 hypermethylated 0.5486827 5.6642e-03 weaklyHypermeth 8.0917e-02 weaklyHypermeth 0.894187 0.905808 -0.00629586 4 0.906486 0.823965 0.0825210 9.4992e-01 2.9290e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.4279e-01 1.6195e-03 lowCoverage 1.0000e+00 1.0122e-01 lowCoverage -0.0492781 1.4144e-01 lowCoverage 1.0000e+00 lowCoverage 0.897395 0.2996923 0.60212356 8 0.898636 0.3034843 5.9515e-01 1.4786e-35 1.0000e+00 hypermethylated 1.4786e-33 1.0000e+00 hypermethylated 9.2357e-12 1.0000e+00 hypermethylated 1.3194e-09 1.0000e+00 hypermethylated 0.5659925 5.0088e-03 weaklyHypermeth 7.0547e-02 weaklyHypermeth 0.897395 0.907233 0.00089051 4 0.898636 0.926961 -0.02832472 8.5834e-01 3.2186e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.6408e-01 1.7354e-02 lowCoverage 1.0000e+00 7.0169e-01 lowCoverage -0.0319684 3.0944e-01 lowCoverage 1.00000000 lowCoverage 0.2996923 0.907233 -0.6200438 4 0.3034843 0.926961 -0.62347638 1.0000e+00 2.4135e-18 lowCoverage 1.0000e+00 2.4135e-16 lowCoverage 1.0000e+00 7.4999e-09 lowCoverage 1.0000e+00 9.3749e-07 lowCoverage -0.5979609 3.5775e-03 lowCoverage 0.07203215 lowCoverage chr1 14007431 14008431 249 PRDM2 ENSG00000116731 0.909350 328 7 0.6401506 198 8 0.787660 60 4 0.886615 334 7 0.772689 70 4 0.830016 195 7 0.6854968 72 6 0.597465 57 4 0.8515306 43 6 0.928571 65 5 0.739785 281 7 0.714286 9 0 0.668124 67 4 0.7800621 59 4 0.6746032 51 4 0.916667 34 4 0.8332284 1064 6 0.904942 308 6 0.731462 114 5 0.844621 192 7 0.636278 65 5 0.8400000 70 3 0.746351 113 7 0.821733 82 5 0.954197 299 7 0.7916526 214 7 0.929762 30 4 0.800000 27 3 0.808740 124 5 0.8047329 188 8 0.7788758 189 7 0.802165 256 7 0.7323489 123 6 0.8767857 84 5 0.7839962 642 7 0.829861 48 5 0.7589949 122 7 0.7969734 234 7 0.962714 394 7 0.9513742 395 7 0.9445201 645 7 0.8236106 305 5 0.8951057 319 7 0.9305209 0.7583439 0.871299 0.920977 0.846258 0.866208 0.682155 0.8044439 0.8331797 0.935484 0.855609 0.7032258 0.833081 0.8557819 0.8855638 0.8600064 0.9481827 0.8720940 0.7799927 0.8782647 0.804851 0.9360000 0.869456 0.9205279 0.9422880 0.8784164 0.8995699 0.8116927 0.8990125 0.869343 0.8826822 0.9099156 0.8599445 0.9080184 0.86577713 0.8437276 0.8464733 0.9062734 0.9509365 0.9537298 0.9356383 0.9161093 0.8995465 4 0.881700 0.910078 -0.02517758 7 0.804714 0.794668 1.0045e-02 0.33201894 0.00623626 weaklyHypometh 1.00000 0.415751 insignificant 0.63674252 0.01119278 weaklyHypometh 1.00000 0.575697 insignificant -0.02467441 0.45314454 insignificant 1.00000 insignificant 0.881700 0.9217877 -0.0273996 7 0.804714 0.7976464 0.0070673 5.3946e-03 3.9194e-02 weaklyHypometh 3.2497e-02 1.0000e+00 weaklyHypometh 2.7517e-01 1.1206e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0116271 7.1030e-01 insignificant 1.0000e+00 insignificant 0.881700 0.953839 -0.05305425 7 0.804714 0.901544 -0.0968306 9.9982e-01 3.3838e-03 weaklyHypometh 1.0000e+00 1.0916e-01 insignificant 9.9710e-01 2.8226e-02 weaklyHypometh 1.0000e+00 4.9933e-01 insignificant -0.1305988 2.7832e-03 weaklyHypometh 8.4340e-02 weaklyHypometh 0.910078 0.9217877 -0.00146234 7 0.794668 0.7976464 -2.9779e-03 7.4587e-02 3.0870e-01 insignificant 3.5688e-01 1.0000e+00 insignificant 2.1286e-01 6.1398e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0130473 6.8374e-01 insignificant 1.0000e+00 insignificant 0.910078 0.953839 -0.02830872 7 0.794668 0.901544 -0.10687573 9.4339e-01 1.7767e-03 weaklyHypometh 1.0000e+00 8.8833e-02 weaklyHypometh 4.1985e-01 4.9160e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.1059243 1.1396e-02 weaklyHypometh 0.32059312 insignificant 0.9217877 0.953839 -0.0224402 7 0.7976464 0.901544 -0.10389781 8.2942e-01 4.9274e-03 weaklyHypometh 1.0000e+00 3.9419e-02 weaklyHypometh 7.9754e-01 1.1181e-01 insignificant 1.0000e+00 6.6949e-01 insignificant -0.1189716 6.8650e-03 weaklyHypometh 0.11437533 insignificant chr1 14635031 14636031 263 ENSG00000209090 0.718204 172 5 0.5435772 65 5 0.655076 64 5 0.705467 101 5 0.850000 40 4 0.793624 169 5 0.6765112 82 5 0.753527 54 4 0.5326118 48 5 0.595357 53 5 0.744231 136 5 0.573168 50 5 0.701027 84 5 NA 0 0 0.7195960 91 5 0.626797 60 3 0.6159944 72 5 0.643704 102 5 0.650027 100 5 0.765455 166 5 0.749474 45 3 0.7611111 30 3 0.648453 91 5 0.767262 45 2 0.853333 24 3 0.6461538 102 5 0.867532 57 3 0.696970 29 2 0.742136 45 4 0.6441289 152 5 0.7153284 122 5 0.700699 238 5 0.6534732 78 5 0.6308418 77 5 0.6945721 108 5 0.865455 44 5 0.6157143 38 2 0.7079877 87 5 0.736130 179 5 0.7249903 109 5 0.8049149 113 5 0.7419935 156 5 0.7105411 147 5 0.7361094 0.6465175 0.712671 0.736080 0.841398 0.786952 0.751082 0.7753887 0.6321045 0.623099 0.783809 0.6826332 0.741419 NA 0.7552297 0.7112587 0.6351721 0.7373955 0.7392859 0.7684643 0.761969 0.7876344 0.696832 0.7497120 0.8516129 0.7230149 0.8018433 0.7096774 0.7434018 0.733057 0.7567095 0.7317688 0.6741484 0.6148480 0.71731494 0.7870968 0.6633641 0.7217333 0.7632988 0.8158555 0.8712648 0.8025775 0.7487257 2 0.702750 0.718367 -0.00804411 5 0.685404 0.695666 -1.0261e-02 0.42625293 0.16603663 insignificant 1.00000 1.000000 insignificant 0.79868166 0.03730197 weaklyHypometh 1.00000 0.828933 insignificant -0.05566488 0.06571234 lowCoverage 1.00000 lowCoverage 0.702750 0.6944444 0.0200104 5 0.685404 0.7013498 -0.0159454 8.2110e-03 2.9776e-01 weaklyHypermeth 4.6920e-02 1.0000e+00 weaklyHypermeth 2.9585e-02 4.7859e-01 weaklyHypermeth 2.0403e-01 1.0000e+00 insignificant -0.0176237 6.8566e-01 lowCoverage 1.0000e+00 lowCoverage 0.702750 0.737216 -0.05469076 5 0.685404 0.738811 -0.0534069 9.9401e-01 5.8214e-03 weaklyHypometh 1.0000e+00 1.6171e-01 insignificant 9.9173e-01 5.9637e-03 weaklyHypometh 1.0000e+00 1.8637e-01 insignificant -0.0666637 1.8231e-02 lowCoverage 3.4398e-01 lowCoverage 0.718367 0.6944444 0.03027901 5 0.695666 0.7013498 -5.6839e-03 4.1847e-03 4.3582e-01 weaklyHypermeth 2.7531e-02 1.0000e+00 weaklyHypermeth 3.2824e-02 8.8206e-01 weaklyHypermeth 2.1882e-01 1.0000e+00 insignificant 0.0380412 3.9900e-01 lowCoverage 1.0000e+00 lowCoverage 0.718367 0.737216 -0.04987101 5 0.695666 0.738811 -0.04314542 9.9139e-01 4.9247e-03 weaklyHypometh 1.0000e+00 1.8240e-01 insignificant 8.6913e-01 6.6307e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0109989 6.8764e-01 lowCoverage 1.00000000 lowCoverage 0.6944444 0.737216 -0.0826256 5 0.7013498 0.738811 -0.03746147 7.3500e-01 3.2270e-03 weaklyHypometh 1.0000e+00 2.7347e-02 weaklyHypometh 7.5749e-01 9.0477e-03 weaklyHypometh 1.0000e+00 1.0521e-01 insignificant -0.0490400 2.6658e-01 lowCoverage 1.00000000 lowCoverage chr1 14827131 14828131 270 ENSG00000189337 0.816092 177 3 0.8109961 185 5 0.765235 130 5 0.934836 183 3 0.859743 132 5 0.949014 209 3 0.7944862 190 5 0.861305 146 5 0.8357599 130 5 0.775575 93 5 0.829938 250 6 0.763993 81 4 0.813675 93 4 0.8433442 45 2 0.8996305 128 5 0.901516 110 4 0.7543938 506 4 0.930128 128 3 0.909416 127 5 0.653820 183 4 0.936254 60 5 0.9248366 24 2 0.736050 115 5 0.624190 89 6 0.917460 40 2 0.8558472 197 5 0.784641 50 4 0.820513 52 4 0.794845 141 5 0.9484257 209 5 0.9147649 190 5 0.830469 195 5 0.3417330 211 5 0.5555556 103 5 0.4818235 133 4 0.666667 4 0 0.7819487 180 5 0.7515929 179 5 0.755710 140 3 0.8925265 134 4 0.8917752 201 3 0.8511905 29 2 0.8898141 104 3 0.8622408 0.8625316 0.786580 0.911305 0.852248 0.919148 0.868252 0.8404762 0.8790236 0.852771 0.825427 0.7837995 0.998028 0.8421617 0.9301345 0.9482143 0.8387097 0.8641519 0.9361056 0.8377345 0.942801 0.8873771 0.831162 0.7965328 0.8706263 0.9055047 0.9223228 0.8641026 0.8846438 0.944585 0.9051246 0.8859611 0.5904347 0.7474359 0.69575916 0.7938931 0.8207101 0.8488584 0.8390057 0.8378358 0.8513423 0.9010989 0.8245970 2 0.895194 0.890602 -0.00347124 5 0.777693 0.722270 5.5423e-02 0.90773383 0.62137523 insignificant 1.00000 1.000000 insignificant 0.80351503 0.65250963 insignificant 1.00000 1.000000 insignificant -0.00554645 0.86607873 lowCoverage 1.00000 lowCoverage 0.895161 0.6333333 0.2549908 5 0.745935 0.4492813 0.2966537 2.5187e-10 9.9999e-01 hypermethylated 3.9354e-09 1.0000e+00 hypermethylated 6.7874e-05 9.9007e-01 hypermethylated 1.0947e-03 1.0000e+00 hypermethylated 0.2385914 1.6994e-02 lowCoverage 1.9761e-01 lowCoverage 0.895717 0.843750 0.05350791 3 0.870257 0.854737 0.0155204 8.1137e-03 1.5692e-01 lowCoverage 1.8440e-01 1.0000e+00 lowCoverage 1.9803e-01 2.8049e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0210584 5.1792e-01 lowCoverage 1.0000e+00 lowCoverage 0.897189 0.6333333 0.25131084 5 0.825452 0.4492813 3.7617e-01 5.9361e-07 9.9956e-01 hypermethylated 7.6104e-06 1.0000e+00 hypermethylated 1.1850e-04 9.8443e-01 hypermethylated 1.9582e-03 1.0000e+00 hypermethylated 0.2441379 1.4448e-02 lowCoverage 1.5877e-01 lowCoverage 0.897778 0.843750 0.05745286 3 0.879694 0.854737 0.02495671 3.7271e-03 4.9031e-01 lowCoverage 8.8741e-02 1.0000e+00 lowCoverage 1.0878e-01 6.1111e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0155119 6.9291e-01 lowCoverage 1.00000000 lowCoverage 0.6341162 0.843750 -0.1609299 3 0.5241615 0.854737 -0.33057558 9.8095e-01 3.5716e-03 lowCoverage 1.0000e+00 3.0013e-02 lowCoverage 9.9002e-01 2.0930e-02 lowCoverage 1.0000e+00 1.9933e-01 lowCoverage -0.2596498 1.1391e-02 lowCoverage 0.15472470 lowCoverage chr1 14932131 14933131 275 ENSG00000203390 0.116097 176 5 0.0481129 182 5 0.138919 162 5 0.309539 173 5 0.200122 98 5 0.424078 214 6 0.2245368 149 5 0.129880 217 5 0.1115995 209 5 0.144735 196 5 0.195851 175 6 0.255337 162 5 0.189289 189 5 0.3300395 45 2 0.0896526 177 5 0.086960 94 5 0.1844302 156 3 0.300594 193 5 0.067399 139 5 0.297760 227 6 0.147279 61 5 0.2948292 138 6 0.227457 137 5 0.315741 59 6 0.194444 75 5 0.2888382 213 5 0.171160 84 6 0.196003 106 6 0.113966 140 5 0.1073635 244 5 0.1468230 252 6 0.151839 241 6 0.4183374 184 5 0.4339012 110 5 0.8000000 154 4 0.392157 49 3 0.5815942 90 6 0.4645121 216 6 0.263283 219 5 0.3284615 173 5 0.3181942 167 5 0.3926768 193 5 0.3606430 187 5 0.1399926 0.0543283 0.146434 0.266058 0.166511 0.382209 0.195717 0.0940570 0.1112457 0.176410 0.134746 0.1883482 0.077709 0.1410130 0.0886218 0.0993575 0.1806256 0.1893969 0.0581595 0.1813773 0.194493 0.2413827 0.200126 0.3201814 0.2140590 0.1269319 0.1314859 0.1536229 0.1180890 0.115794 0.1080943 0.1246512 0.3826563 0.3895401 0.88422698 0.4161665 0.6333657 0.5010284 0.2716705 0.2856881 0.2695307 0.2389538 0.3201787 5 0.136214 0.126857 0.01337266 5 0.221319 0.182540 3.8780e-02 0.32079284 0.94769532 insignificant 1.00000 1.000000 insignificant 0.73615045 0.42291360 insignificant 1.00000 1.000000 insignificant -0.00406534 0.89496148 lowCoverage 1.00000 lowCoverage 0.135461 0.4794521 -0.3415997 5 0.197599 0.4861602 -0.2885607 9.6496e-01 3.2089e-17 hypomethylated 1.0000e+00 6.4178e-15 hypomethylated 9.9798e-01 3.0379e-09 hypomethylated 1.0000e+00 5.0631e-07 hypomethylated -0.3228371 2.5267e-03 lowCoverage 4.4742e-02 lowCoverage 0.135461 0.214058 -0.10732533 5 0.197599 0.353971 -0.1563711 9.9997e-01 2.1971e-06 weaklyHypometh 1.0000e+00 1.8309e-04 weaklyHypometh 9.9995e-01 4.7380e-05 weaklyHypometh 1.0000e+00 7.8967e-03 weaklyHypometh -0.1404052 5.2429e-04 lowCoverage 2.9127e-02 lowCoverage 0.126292 0.4794521 -0.35238985 5 0.171296 0.4861602 -3.1486e-01 9.9636e-01 1.1557e-14 hypomethylated 1.0000e+00 2.3115e-12 hypomethylated 9.9120e-01 3.6110e-07 hypomethylated 1.0000e+00 5.1585e-05 hypomethylated -0.3187717 2.8628e-03 lowCoverage 4.4702e-02 lowCoverage 0.126292 0.214058 -0.12703007 5 0.171296 0.353971 -0.18267446 9.9997e-01 2.1790e-07 weaklyHypometh 1.0000e+00 2.7237e-05 weaklyHypometh 9.9718e-01 2.2759e-04 weaklyHypometh 1.0000e+00 3.2512e-02 weaklyHypometh -0.1363399 7.9045e-04 weaklyHypometh 0.07185926 weaklyHypometh 0.4794521 0.214058 0.2361892 5 0.4861602 0.353971 0.13218963 6.8245e-06 9.6038e-01 hypermethylated 6.8245e-04 1.0000e+00 hypermethylated 3.7692e-04 9.9703e-01 hypermethylated 4.7115e-02 1.0000e+00 hypermethylated 0.1824319 3.3076e-02 lowCoverage 0.30912614 lowCoverage chr1 14979431 14980431 279 ENSG00000203390 0.938235 90 5 0.8114559 102 5 0.765714 58 5 0.910673 63 5 0.877778 21 2 0.833053 197 5 0.5070644 34 2 0.746936 71 5 0.8851010 42 5 0.969697 31 2 0.797268 163 5 0.770833 29 2 0.918056 59 5 0.9750000 25 2 0.7724868 40 5 0.640000 17 3 0.7500000 4 0 0.603470 80 5 0.915888 88 5 0.856278 135 5 0.852381 58 5 0.8083333 30 4 0.644949 56 5 0.838095 43 4 0.855000 46 5 0.7257885 119 5 0.610046 105 5 0.605159 40 4 0.929637 85 5 0.7906544 102 5 0.8977273 78 5 0.836929 195 5 0.7904270 89 5 0.8712121 34 2 0.7535666 188 5 NA 0 0 0.8344427 102 5 0.7686396 95 5 0.910000 44 3 0.9736842 72 5 0.9523810 47 5 0.9428571 23 2 0.9114975 82 5 0.9269074 0.7750443 0.755304 0.908655 0.847525 0.898004 0.717187 0.8276684 0.8307831 0.953195 0.929376 0.9306931 0.918729 0.9678218 0.9215779 0.6237624 0.9507694 0.8210288 0.8957994 0.8667125 0.804102 0.8329208 0.780153 0.8343942 0.8514851 0.8657288 0.7308312 0.7108086 0.9057210 0.765670 0.8629613 0.8295174 0.8913681 0.8184068 0.85083949 NA 0.8061038 0.9249623 0.8985149 0.9593538 0.9568600 0.9264498 0.8924756 2 0.865085 0.819227 0.05207552 5 0.663272 0.752969 -8.9697e-02 0.02514365 0.98910010 weaklyHypermeth 1.00000 1.000000 insignificant 0.07176530 0.96344727 insignificant 1.00000 1.000000 insignificant 0.02935763 0.49402365 lowCoverage 1.00000 lowCoverage 0.865085 0.8444882 0.0192590 5 0.663272 0.7639237 -0.1006520 5.1432e-01 9.4789e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.2751e-01 7.3265e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0085917 8.0980e-01 lowCoverage 1.0000e+00 lowCoverage 0.867461 0.921642 -0.05793563 5 0.781349 0.949314 -0.1679642 9.9968e-01 2.3941e-02 weaklyHypometh 1.0000e+00 4.1278e-01 insignificant 9.9985e-01 5.7556e-02 insignificant 1.0000e+00 7.6741e-01 insignificant -0.1258347 3.7887e-04 lowCoverage 2.5258e-02 lowCoverage 0.819227 0.8444882 -0.02664721 5 0.752969 0.7639237 -1.0955e-02 9.2477e-01 3.2872e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.5341e-01 3.9622e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0207659 5.9921e-01 lowCoverage 1.0000e+00 lowCoverage 0.818848 0.921642 -0.11314781 5 0.682389 0.949314 -0.26692489 9.9996e-01 4.2742e-04 weaklyHypometh 1.0000e+00 2.8495e-02 weaklyHypometh 9.9999e-01 2.0286e-03 weaklyHypometh 1.0000e+00 2.2209e-01 insignificant -0.1551923 5.0164e-04 lowCoverage 0.06270479 lowCoverage 0.8463074 0.921642 -0.0747159 5 0.7679019 0.949314 -0.18141162 9.9947e-01 1.9851e-02 weaklyHypometh 1.0000e+00 1.2644e-01 insignificant 9.9999e-01 3.9261e-02 weaklyHypometh 1.0000e+00 3.1737e-01 insignificant -0.1344263 1.4231e-03 lowCoverage 0.04411773 lowCoverage chr1 14981031 14982031 280 ENSG00000203390 0.723858 138 5 0.5363346 204 5 0.665263 87 5 0.806266 132 5 0.641587 57 5 0.523020 311 5 0.7274412 93 5 0.736640 167 5 0.7253655 85 5 0.749675 41 5 0.753260 247 5 0.762857 50 5 0.667333 109 5 0.3898578 68 4 0.7695321 122 5 0.666667 18 0 0.0000000 6 0 0.703664 176 5 0.686159 198 5 0.695477 260 5 0.684128 112 7 0.5916767 145 5 0.817645 127 5 0.550021 118 5 0.591612 136 3 0.6986334 236 5 0.545194 180 5 0.489362 74 5 0.530825 130 4 0.6929341 247 5 0.5261067 171 4 0.721913 310 5 0.7215584 95 4 0.5089027 84 5 0.6432164 87 5 0.809091 28 3 0.5051366 159 5 0.7814847 182 5 0.682456 148 5 0.7113005 151 5 0.7047868 140 5 0.7601026 100 5 0.7606878 127 5 0.6974162 0.5897394 0.651848 0.804192 0.641749 0.654198 0.722766 0.7137793 0.7295735 0.738884 0.677772 0.7621968 0.643160 0.5597076 0.7820859 0.7012579 0.4334572 0.6742110 0.6446173 0.6735620 0.721035 0.5845445 0.812244 0.6423610 0.5546127 0.6867978 0.5239733 0.4611324 0.5471830 0.674652 0.6216856 0.6867069 0.6792330 0.6021407 0.65748786 0.7897321 0.6142348 0.6718897 0.6614565 0.6849271 0.6799103 0.7443154 0.7437232 4 0.691709 0.663646 0.02553234 5 0.605359 0.618337 -1.2978e-02 0.15797075 0.48254857 insignificant 1.00000 1.000000 insignificant 0.16102071 0.85549524 insignificant 1.00000 1.000000 insignificant 0.02650869 0.59843486 lowCoverage 1.00000 lowCoverage 0.691709 0.6850394 0.0115970 5 0.605359 0.6237116 -0.0183525 1.2662e-01 3.4019e-01 insignificant 5.7554e-01 1.0000e+00 insignificant 6.1535e-01 5.4316e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0150520 8.2775e-01 lowCoverage 1.0000e+00 lowCoverage 0.693120 0.698198 -0.02194570 5 0.694169 0.720121 -0.0259519 9.0356e-01 1.4636e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.5809e-01 1.9830e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0773539 8.8127e-02 lowCoverage 8.3139e-01 lowCoverage 0.663646 0.6850394 -0.01371888 5 0.618337 0.6237116 -5.3743e-03 3.5605e-01 2.8181e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.0060e-01 8.3357e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0415607 5.1758e-01 lowCoverage 1.0000e+00 lowCoverage 0.665310 0.698198 -0.05171902 5 0.665672 0.720121 -0.05444913 9.9622e-01 5.2440e-02 insignificant 1.0000e+00 9.7110e-01 insignificant 9.9946e-01 1.9800e-02 weaklyHypometh 1.0000e+00 7.3333e-01 insignificant -0.1038625 6.6443e-03 lowCoverage 0.22911395 lowCoverage 0.6863057 0.698198 -0.0410643 5 0.6531962 0.720121 -0.06692511 9.1264e-01 2.6264e-02 weaklyHypometh 1.0000e+00 1.6113e-01 insignificant 8.6000e-01 1.2252e-01 insignificant 1.0000e+00 7.2072e-01 insignificant -0.0623018 3.1237e-01 lowCoverage 1.00000000 lowCoverage chr1 14983031 14984031 281 ENSG00000203390 0.811157 60 5 0.8100689 126 5 0.609048 49 5 0.656471 40 3 0.870000 51 5 0.743732 87 5 0.4978124 64 5 0.806794 103 5 0.7454637 66 5 0.744540 61 4 0.781225 162 5 0.854167 16 1 0.796338 94 5 0.7333333 14 2 0.6520746 61 4 0.403333 15 1 0.8092593 27 3 0.797619 40 3 0.810463 88 5 0.706667 53 5 0.594907 67 4 0.5000000 2 0 0.755838 58 5 0.815954 73 5 0.666667 17 1 0.8487886 126 5 0.786667 31 3 0.845513 48 4 0.707344 85 5 0.8031746 124 5 0.8361270 134 5 0.839077 82 4 0.6630100 126 5 0.7159091 89 5 0.7730921 91 5 0.500000 4 0 0.7317688 57 5 0.7351866 123 5 0.750916 47 4 0.8444444 65 4 0.8709957 43 3 0.8125000 16 1 0.9446154 41 4 0.8120481 0.8159718 0.721062 0.863952 0.888248 0.765325 0.626898 0.8480064 0.8199923 0.815539 0.796053 0.8242382 0.827134 0.8534323 0.7121929 0.6131270 0.7226198 0.8901099 0.8229435 0.7401709 0.738960 0.7624527 0.718967 0.8296312 0.8096124 0.8500659 0.8444444 0.9084484 0.7326500 0.865690 0.8548732 0.8633603 0.7059372 0.7992424 0.79260290 0.4806987 0.7559166 0.7938718 0.8235184 0.8589744 0.9007659 0.8792735 0.9573964 0 0.779170 0.836686 -0.02948775 5 0.681904 0.826976 -1.4507e-01 0.96344622 0.10143365 insignificant 1.00000 1.000000 insignificant 0.79147161 0.23950109 insignificant 1.00000 1.000000 insignificant -0.01802645 0.67001936 lowCoverage 1.00000 lowCoverage 0.780833 0.7551020 0.0552662 5 0.768284 0.7121779 0.0561065 4.3913e-02 9.4769e-01 weaklyHypermeth 2.2291e-01 1.0000e+00 insignificant 4.5731e-02 9.4958e-01 weaklyHypermeth 2.9315e-01 1.0000e+00 insignificant 0.0454839 3.6608e-01 lowCoverage 1.0000e+00 lowCoverage 0.780833 0.830189 -0.07170022 4 0.768284 0.853864 -0.0855792 9.9767e-01 2.5061e-03 lowCoverage 1.0000e+00 8.9504e-02 lowCoverage 9.7173e-01 6.7476e-04 lowCoverage 1.0000e+00 4.8197e-02 lowCoverage -0.1127160 2.1249e-02 lowCoverage 3.8635e-01 lowCoverage 0.836299 0.7551020 0.08529277 5 0.792371 0.7121779 8.0193e-02 4.4252e-04 9.9127e-01 weaklyHypermeth 3.5401e-03 1.0000e+00 weaklyHypermeth 8.6125e-03 8.9988e-01 weaklyHypermeth 7.6216e-02 1.0000e+00 weaklyHypermeth 0.0635103 2.4207e-01 lowCoverage 1.0000e+00 lowCoverage 0.836299 0.830189 -0.04254658 4 0.792371 0.853864 -0.06149247 9.7927e-01 5.9838e-03 lowCoverage 1.0000e+00 1.9946e-01 lowCoverage 9.6394e-01 2.9291e-03 lowCoverage 1.0000e+00 2.6628e-01 lowCoverage -0.0946895 5.9881e-02 lowCoverage 0.82029062 lowCoverage 0.7551020 0.830189 -0.1292341 4 0.7121779 0.853864 -0.14168573 1.0000e+00 3.0728e-06 lowCoverage 1.0000e+00 6.2710e-05 lowCoverage 1.0000e+00 3.1354e-05 lowCoverage 1.0000e+00 1.3064e-03 lowCoverage -0.1581998 1.3213e-02 lowCoverage 0.16725594 lowCoverage chr1 15142831 15143831 292 ENSG00000189337 0.639978 236 7 0.4599984 213 7 0.655338 119 7 0.670212 193 7 0.593277 87 7 0.696800 340 7 0.5026485 131 7 0.470236 141 7 0.6936407 143 7 0.668254 80 7 0.793202 278 7 0.587302 47 5 0.613098 132 7 0.7422969 31 3 0.6367788 135 7 0.554386 56 5 0.5500000 63 7 0.704810 180 7 0.674957 220 7 0.721738 296 7 0.765909 62 5 0.7189769 95 7 0.721596 122 7 0.620415 68 5 0.681122 58 4 0.4902563 238 7 0.561874 96 6 0.691327 53 5 0.745265 195 7 0.6245839 246 7 0.7050219 248 7 0.774343 408 7 0.6124356 131 7 0.5804473 125 7 0.5718798 244 7 0.685261 50 7 0.6250567 118 7 0.6224694 222 7 0.680261 257 7 0.6980542 196 7 0.6816247 237 7 0.6542420 193 7 0.6682051 204 7 0.7074680 0.6409154 0.698190 0.742476 0.634599 0.742674 0.700669 0.6666025 0.7528211 0.822996 0.783805 0.6845878 0.670634 0.7209099 0.7743743 0.6231529 0.6290323 0.6959840 0.7432875 0.7578816 0.883496 0.7336694 0.779755 0.7752082 0.7375832 0.7078039 0.7426383 0.7709293 0.7962251 0.726884 0.7720809 0.7510467 0.6883973 0.6374280 0.65811689 0.6982250 0.6878378 0.7242150 0.7351269 0.8074955 0.7001721 0.7134406 0.7130317 6 0.708427 0.736898 -0.02686534 7 0.603411 0.626954 -2.3543e-02 0.97913844 0.06086685 insignificant 1.00000 1.000000 insignificant 0.99944917 0.01048773 weaklyHypometh 1.00000 0.575697 insignificant -0.04360990 0.18406438 insignificant 1.00000 insignificant 0.708427 0.6966292 0.0288369 7 0.603411 0.5995652 0.0038459 4.9372e-02 8.3229e-01 weaklyHypermeth 2.4686e-01 1.0000e+00 insignificant 9.2038e-02 8.6496e-01 insignificant 5.1132e-01 1.0000e+00 insignificant 0.0151893 5.6584e-01 insignificant 1.0000e+00 insignificant 0.708427 0.701012 -0.01671948 7 0.603411 0.639550 -0.0361393 8.4077e-01 1.1808e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.2204e-01 1.1258e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0450299 4.6828e-02 weaklyHypometh 6.0036e-01 insignificant 0.736898 0.6966292 0.05530476 7 0.626954 0.5995652 2.7389e-02 1.6746e-04 8.4893e-01 weaklyHypermeth 1.4191e-03 1.0000e+00 weaklyHypermeth 1.6166e-03 9.7093e-01 weaklyHypermeth 1.7765e-02 1.0000e+00 weaklyHypermeth 0.0587991 6.5436e-02 insignificant 5.2108e-01 insignificant 0.736898 0.701012 0.00990712 7 0.626954 0.639550 -0.01259620 4.0549e-01 5.9583e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.3081e-01 8.8558e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0014200 9.5697e-01 insignificant 1.00000000 insignificant 0.6966292 0.701012 -0.0453837 7 0.5995652 0.639550 -0.03998526 5.3235e-01 2.9363e-03 weaklyHypometh 1.0000e+00 2.5477e-02 weaklyHypometh 8.6259e-01 1.8298e-02 weaklyHypometh 1.0000e+00 1.7790e-01 insignificant -0.0602192 1.2858e-02 weaklyHypometh 0.16484685 insignificant chr1 15483031 15484031 301 FHAD1 ENSG00000142621 0.579883 136 5 0.5963098 75 5 0.430556 42 4 0.728018 96 5 0.736111 32 4 0.662574 164 5 0.7287879 41 4 0.631429 42 4 0.6516440 47 5 0.804762 21 1 0.595633 116 5 0.636111 19 1 0.875000 24 1 0.8111111 30 4 0.6471429 33 4 0.583333 31 4 0.5892857 25 3 0.719048 41 5 0.437500 23 1 0.532810 123 5 0.500000 8 1 0.7040816 44 4 0.693473 57 5 0.585897 29 2 0.622222 23 3 0.4912088 54 5 0.713636 24 2 0.708333 22 2 0.676923 35 1 0.6463492 56 5 0.6860000 39 2 0.749197 157 5 0.4222944 61 5 0.3600000 21 1 0.5268269 55 5 0.693333 18 2 0.5997549 38 4 0.4601504 57 5 0.678975 132 5 0.7529304 73 5 0.6903922 73 5 0.8000000 22 1 0.7442130 55 5 0.6885889 0.6752341 0.591463 0.763911 0.792683 0.699380 0.726164 0.6970383 0.7519599 0.784146 0.778791 0.8201220 0.869314 0.8421409 0.7177700 0.7042683 0.7027302 0.7656794 0.5004114 0.6901273 0.468712 0.8314460 0.762792 0.6643996 0.5804878 0.6133342 0.8461706 0.7637195 0.7368668 0.736469 0.6893902 0.7784001 0.5631137 0.4853659 0.57877666 0.7902439 0.7342181 0.5963690 0.7618834 0.8197534 0.7773912 0.8170732 0.7619411 1 0.694229 0.744526 -0.01899700 4 0.643544 0.666005 -2.2460e-02 0.87091904 0.38245605 lowCoverage 1.00000 1.000000 lowCoverage 0.81219686 0.66591864 lowCoverage 1.00000 1.000000 lowCoverage 0.00074224 0.98335025 lowCoverage 1.00000 lowCoverage 0.694229 0.5960000 0.1114681 4 0.643544 0.4762086 0.1673356 2.1531e-04 9.9988e-01 lowCoverage 1.7794e-03 1.0000e+00 lowCoverage 1.0885e-02 9.9999e-01 lowCoverage 1.0036e-01 1.0000e+00 lowCoverage 0.1384591 3.9361e-02 lowCoverage 3.8215e-01 lowCoverage 0.694107 0.721127 -0.06115039 5 0.608059 0.757489 -0.1494304 9.6542e-01 6.6860e-03 weaklyHypometh 1.0000e+00 1.7764e-01 insignificant 9.7072e-01 3.3539e-02 weaklyHypometh 1.0000e+00 5.6616e-01 insignificant -0.0844498 2.4091e-02 lowCoverage 4.0832e-01 lowCoverage 0.744526 0.5960000 0.12829876 4 0.666005 0.4762086 1.8980e-01 4.9458e-04 9.9756e-01 lowCoverage 3.8639e-03 1.0000e+00 lowCoverage 1.0127e-02 9.9499e-01 lowCoverage 8.5822e-02 1.0000e+00 lowCoverage 0.1377169 3.9956e-02 lowCoverage 3.5049e-01 lowCoverage 0.744954 0.721127 -0.04527841 4 0.638006 0.757489 -0.11948335 6.3950e-01 4.1895e-02 lowCoverage 1.0000e+00 8.1816e-01 lowCoverage 7.7713e-01 3.3664e-02 lowCoverage 1.0000e+00 9.9012e-01 lowCoverage -0.0851920 2.2110e-02 lowCoverage 0.44219676 lowCoverage 0.5975610 0.721127 -0.1737171 4 0.4682781 0.757489 -0.28921124 9.9951e-01 2.8537e-04 lowCoverage 1.0000e+00 3.4801e-03 lowCoverage 9.9995e-01 1.3603e-03 lowCoverage 1.0000e+00 2.3453e-02 lowCoverage -0.2229089 4.9087e-03 lowCoverage 0.08924824 lowCoverage chr1 15541731 15542731 303 FHAD1 ENSG00000142621 0.942938 105 5 0.7880037 100 6 0.804884 178 6 0.947634 95 5 0.917609 102 5 0.931945 174 6 0.9436533 87 5 0.700632 81 5 0.8127538 138 5 0.938462 182 5 0.877047 92 5 0.893655 150 5 0.936762 123 5 0.9415140 122 5 0.9592673 173 5 0.900280 101 5 0.8000000 8 0 0.878929 132 5 0.754419 98 5 0.878444 96 5 1.000000 18 0 0.8968421 88 5 0.906987 72 6 0.833333 27 3 0.981818 44 4 0.8819605 172 6 0.917179 48 5 0.926891 71 5 0.824712 55 5 0.9192077 151 6 0.9375000 128 6 0.899575 125 6 0.5793651 132 6 0.6066667 23 4 0.5416901 264 6 0.527778 35 4 0.4346024 76 5 0.7419893 130 6 0.786310 90 5 0.9356725 75 5 0.9053342 66 5 0.7935049 81 5 0.9000000 60 5 0.9315006 0.7826702 0.780725 0.940405 0.907424 0.947502 0.927245 0.8270473 0.8010556 0.941533 0.835256 0.8554165 0.913488 0.9310939 0.9598353 0.8880475 0.7417582 0.8422899 0.9070305 0.8429327 1.000000 0.8939078 0.871753 0.9137363 0.9765235 0.8800027 0.8958087 0.9056007 0.8481382 0.916666 0.9167648 0.8746444 0.6243132 0.7316850 0.59209967 0.5399878 0.4971482 0.6594023 0.9225504 0.9003277 0.8645808 0.9458428 0.8827839 3 0.891742 0.903904 -0.01394266 5 0.844690 0.852382 -7.6923e-03 0.90605836 0.06399657 insignificant 1.00000 1.000000 insignificant 0.98306157 0.06804480 insignificant 1.00000 1.000000 insignificant -0.03305884 0.14927261 lowCoverage 1.00000 lowCoverage 0.891742 0.5954545 0.2941782 5 0.844690 0.5086747 0.3360154 2.1513e-17 9.9991e-01 hypermethylated 5.2471e-16 1.0000e+00 hypermethylated 1.8010e-05 9.9987e-01 hypermethylated 3.3981e-04 1.0000e+00 hypermethylated 0.3054264 3.0259e-04 lowCoverage 6.9215e-03 lowCoverage 0.891742 0.908602 -0.02159553 5 0.844690 0.807455 0.0372350 5.8121e-01 2.8072e-02 weaklyHypometh 1.0000e+00 4.6787e-01 insignificant 6.5949e-01 5.5274e-02 insignificant 1.0000e+00 7.4694e-01 insignificant 0.0132774 7.1785e-01 lowCoverage 1.0000e+00 lowCoverage 0.903904 0.5954545 0.30534944 5 0.852382 0.5086747 3.4371e-01 6.3705e-12 1.0000e+00 hypermethylated 1.3272e-10 1.0000e+00 hypermethylated 8.4717e-06 1.0000e+00 hypermethylated 1.9287e-04 1.0000e+00 hypermethylated 0.3384852 2.0414e-04 lowCoverage 5.3721e-03 lowCoverage 0.903904 0.908602 -0.00644458 5 0.852382 0.807455 0.04492738 5.5706e-01 2.7767e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.8106e-01 4.9941e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0463362 2.2580e-01 lowCoverage 1.00000000 lowCoverage 0.5954545 0.908602 -0.3011612 5 0.5086747 0.807455 -0.29878032 9.9999e-01 2.0774e-05 hypomethylated 1.0000e+00 3.5816e-04 hypomethylated 1.0000e+00 5.1947e-04 hypomethylated 1.0000e+00 1.1544e-02 hypomethylated -0.2921490 3.5777e-04 hypomethylated 0.01431065 hypomethylated chr1 15824231 15825231 312 DDI2 ENSG00000197312 0.572126 113 5 0.6110301 145 7 0.489796 44 7 0.522129 111 5 0.720370 41 6 0.646856 126 7 0.5816327 58 7 0.566667 67 5 0.6027778 93 7 0.610644 49 3 0.608435 115 5 0.452381 20 2 0.595238 76 7 0.5851648 50 4 0.6992521 66 3 0.666667 9 0 0.6666667 6 0 0.576923 86 6 0.524847 100 7 0.610993 145 7 0.592857 29 3 1.0000000 9 0 0.558499 43 2 0.670068 47 5 0.494505 61 4 0.6438230 123 7 0.651629 38 2 0.618750 29 2 0.574290 86 4 0.6263323 153 7 0.6604351 131 5 0.470721 103 5 0.5612245 89 7 0.6071429 65 4 0.4918258 90 5 0.484127 21 1 0.5334989 73 6 0.5870355 129 5 0.398429 79 4 0.6243516 104 5 0.5465429 98 5 0.6785714 53 3 0.6069995 99 5 0.6119637 0.6684188 0.571429 0.554429 0.742816 0.700814 0.616995 0.5988506 0.6855843 0.682894 0.622848 0.4482759 0.676006 0.6582670 0.7237695 0.7471264 0.6719199 0.6667948 0.6463765 0.6911970 0.618599 0.8708787 0.622883 0.7331691 0.5101680 0.7041213 0.7141561 0.5709770 0.6440947 0.709783 0.7296947 0.6522342 0.6071429 0.6422414 0.46557309 0.5057471 0.5950443 0.6106192 0.5459770 0.6362637 0.5833009 0.7629310 0.6585601 0 0.640789 0.692488 -0.02737676 5 0.710535 0.537021 1.7351e-01 0.99955859 0.29102485 insignificant 1.00000 1.000000 insignificant 0.96934439 0.72260999 insignificant 1.00000 1.000000 insignificant -0.03462932 0.41305711 lowCoverage 1.00000 lowCoverage 0.640079 0.5845824 0.0940355 5 0.586478 0.5510520 0.0354263 3.7119e-04 6.6767e-01 weaklyHypermeth 2.8999e-03 1.0000e+00 weaklyHypermeth 7.0789e-02 8.2585e-01 insignificant 4.1157e-01 1.0000e+00 insignificant 0.0513874 6.7326e-02 lowCoverage 5.6577e-01 lowCoverage 0.640553 0.739030 0.00081905 5 0.678372 0.460239 0.2181333 7.6014e-01 6.2366e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.7644e-01 5.6806e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0245509 6.4672e-01 lowCoverage 1.0000e+00 lowCoverage 0.693757 0.5845824 0.11869638 5 0.624316 0.5510520 7.3264e-02 9.5019e-05 9.3367e-01 weaklyHypermeth 8.3350e-04 1.0000e+00 weaklyHypermeth 1.4702e-02 9.8739e-01 weaklyHypermeth 1.1054e-01 1.0000e+00 insignificant 0.0860167 6.5685e-02 lowCoverage 5.2108e-01 lowCoverage 0.693302 0.739030 0.02918725 5 0.596690 0.460239 0.13645146 2.0682e-01 8.5849e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.5988e-01 9.4542e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0591803 3.5949e-01 lowCoverage 1.00000000 lowCoverage 0.5845824 0.742459 -0.1038093 5 0.5510520 0.591735 -0.04068347 7.4434e-01 2.0231e-02 weaklyHypometh 1.0000e+00 1.2804e-01 insignificant 9.7992e-01 1.3481e-01 insignificant 1.0000e+00 7.8835e-01 insignificant -0.0268364 6.2727e-01 lowCoverage 1.00000000 lowCoverage chr1 15996131 15997131 316 ENSG00000216400 0.727332 325 9 0.5145657 175 9 0.699643 180 9 0.785907 247 9 0.659378 101 9 0.758533 279 9 0.7247420 132 8 0.733974 131 9 0.5759655 167 9 0.670244 99 6 0.583652 354 9 0.559920 91 6 0.625417 147 9 0.8659722 64 4 0.7254858 175 9 0.643386 77 6 0.6950142 84 6 0.816243 255 9 0.775116 173 9 0.825550 234 9 0.741957 73 7 0.7317019 98 9 0.774375 164 9 0.809468 89 4 0.863316 74 6 0.7685284 231 9 0.648693 102 5 0.668934 69 3 0.663972 150 9 0.7561786 200 9 0.6853958 172 9 0.626311 331 9 0.5118475 111 6 0.6481990 97 9 0.6597980 130 9 0.736772 48 6 0.7932576 103 6 0.7315052 209 9 0.842766 296 9 0.8172397 317 9 0.7948959 279 9 0.7918341 249 6 0.7898922 316 9 0.8028585 0.7052673 0.712336 0.837783 0.783012 0.829810 0.766030 0.8137856 0.7226000 0.836805 0.799577 0.6746839 0.775639 0.7937851 0.8085373 0.8106576 0.7414961 0.8545905 0.8370877 0.8686411 0.837264 0.7578711 0.836157 0.8453201 0.8838886 0.7977603 0.7435897 0.7747891 0.7245294 0.847115 0.8461781 0.7438212 0.6716806 0.7361530 0.76939727 0.7137624 0.8046315 0.7796494 0.8671892 0.8683777 0.8509795 0.8433442 0.8509779 3 0.775645 0.791096 -0.00020613 9 0.577036 0.738616 -1.6158e-01 0.57862806 0.10667044 insignificant 1.00000 1.000000 insignificant 0.92199157 0.10559809 insignificant 1.00000 1.000000 insignificant -0.02993375 0.31920854 insignificant 1.00000 insignificant 0.775867 0.7492837 0.0408460 9 0.629493 0.6634264 -0.0339330 2.2608e-03 7.5473e-01 weaklyHypermeth 1.5243e-02 1.0000e+00 weaklyHypermeth 6.5697e-02 8.1449e-01 insignificant 3.8956e-01 1.0000e+00 insignificant 0.0180720 7.0106e-01 insignificant 1.0000e+00 insignificant 0.776916 0.800687 -0.05265340 9 0.659109 0.811931 -0.1528221 9.9955e-01 2.9320e-02 weaklyHypometh 1.0000e+00 4.8066e-01 insignificant 9.9990e-01 7.5007e-03 weaklyHypometh 1.0000e+00 2.1431e-01 insignificant -0.1090236 1.1395e-04 weaklyHypometh 1.4243e-02 weaklyHypometh 0.790977 0.7492837 0.03748423 9 0.714854 0.6634264 5.1428e-02 2.6835e-02 9.1567e-01 weaklyHypermeth 1.4322e-01 1.0000e+00 insignificant 1.9895e-01 9.5529e-01 insignificant 9.8492e-01 1.0000e+00 insignificant 0.0480058 3.1948e-01 insignificant 1.0000e+00 insignificant 0.792193 0.800961 -0.04968248 9 0.784551 0.829029 -0.04447737 9.9882e-01 7.2133e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9883e-01 2.1163e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0790898 3.6822e-03 weaklyHypometh 0.15823880 insignificant 0.7518038 0.800413 -0.0890159 9 0.6997433 0.791035 -0.09129154 9.9521e-01 1.6799e-04 weaklyHypometh 1.0000e+00 2.2398e-03 weaklyHypometh 9.9891e-01 3.4082e-03 weaklyHypometh 1.0000e+00 5.1640e-02 weaklyHypometh -0.1270956 2.3875e-02 weaklyHypometh 0.23462345 insignificant chr1 16055731 16056731 317 ENSG00000179743 0.630599 139 8 0.4625064 88 5 0.348333 28 3 0.581315 96 7 0.604040 35 3 0.664469 135 8 0.3800000 49 4 0.462409 52 5 0.6779487 43 5 0.750000 16 0 0.509654 104 5 0.750000 12 0 0.510000 52 5 0.8054545 41 5 0.6539683 45 5 0.833333 20 2 0.4725087 208 4 0.660968 133 9 0.628571 26 2 0.695020 102 7 0.402778 17 1 NA 0 0 0.703889 68 7 0.613333 17 2 0.345588 21 1 0.5285507 66 4 0.500000 11 1 0.600000 19 1 0.630649 49 5 0.5875000 49 3 0.7085526 57 3 0.700568 92 6 0.3429085 66 5 0.4596154 38 3 0.3727273 62 3 0.500000 6 0 0.4466667 51 5 0.3954545 65 3 0.511497 135 8 0.5430409 119 8 0.5398942 155 8 0.5338889 73 6 0.5857906 117 8 0.4980882 0.5164028 0.329955 0.639062 0.606607 0.493220 0.424324 0.5240366 0.6584893 0.756757 0.506698 0.6621622 0.564865 0.8469287 0.6619477 0.7747748 0.5115896 0.6357980 0.6447876 0.5824485 0.470129 NA 0.393050 0.6477477 0.4111290 0.5705445 0.5812403 0.7027027 0.5742366 0.633446 0.7708926 0.5726351 0.4087352 0.4617983 0.36486486 0.2920774 0.4783784 0.4140049 0.4222246 0.5757863 0.4479479 0.4656156 0.4968203 0 0.600282 0.622318 -0.00487997 3 0.697706 0.711883 -1.4177e-02 0.91668351 0.76080585 lowCoverage 1.00000 1.000000 lowCoverage 0.81253094 0.84692483 lowCoverage 1.00000 1.000000 lowCoverage 0.02938134 0.54163323 lowCoverage 1.00000 lowCoverage 0.595496 0.4722222 0.0901793 5 0.530947 0.4296051 0.1013423 6.1176e-03 9.9908e-01 weaklyHypermeth 3.6414e-02 1.0000e+00 weaklyHypermeth 1.0331e-03 9.9975e-01 weaklyHypermeth 1.2485e-02 1.0000e+00 weaklyHypermeth 0.1844928 1.1953e-04 lowCoverage 3.2307e-03 lowCoverage 0.597320 0.598651 0.05622201 6 0.635206 0.600559 0.0346472 2.0010e-01 8.7918e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.1970e-02 8.9653e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0612327 7.4190e-02 lowCoverage 7.4190e-01 lowCoverage 0.593301 0.4722222 0.09091989 3 0.526440 0.4296051 9.6835e-02 2.5389e-02 9.9902e-01 lowCoverage 1.3874e-01 1.0000e+00 lowCoverage 1.2137e-02 9.9933e-01 lowCoverage 9.6327e-02 1.0000e+00 lowCoverage 0.1551115 2.9057e-03 lowCoverage 4.4702e-02 lowCoverage 0.618221 0.598639 0.07091900 3 0.679870 0.600621 0.07924918 1.1513e-01 9.9045e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 2.0292e-01 9.9839e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0318513 4.2235e-01 lowCoverage 1.00000000 lowCoverage 0.4722222 0.564920 -0.0093616 5 0.4296051 0.441019 -0.01141410 4.1295e-01 4.8791e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.2801e-01 5.9702e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.1232602 2.3552e-03 lowCoverage 0.06039056 lowCoverage chr1 16173031 16174031 333 ENSG00000217471 0.671604 93 5 0.5174871 222 5 0.648019 66 5 0.687821 97 5 0.449206 35 4 0.787407 512 5 0.4250000 48 5 0.617571 110 5 0.6723077 63 5 0.561905 41 5 0.864460 295 5 0.400000 6 0 0.751207 79 5 0.8109668 53 5 0.7162698 48 5 0.366667 13 2 0.4444444 6 0 0.624339 64 5 0.598497 105 5 0.564057 358 5 0.632778 85 5 0.5613928 73 5 0.677920 56 4 0.611560 194 5 0.772424 69 5 0.8711282 178 5 0.639307 130 5 0.396591 74 5 0.416256 78 5 0.8595149 240 5 0.7855793 182 5 0.851048 378 5 0.7132157 112 5 0.4583115 48 5 0.6495552 127 5 0.533333 12 0 0.5221946 345 5 0.8546213 157 5 0.683333 60 3 0.6724181 77 5 0.4508772 58 5 0.9111111 24 2 0.7867799 73 5 0.6466058 0.6744610 0.605225 0.736309 0.602426 0.843807 0.429665 0.6858151 0.7167392 0.618598 0.860564 0.4339623 0.784822 0.7577663 0.7948113 0.5292833 0.7176172 0.7052391 0.7414054 0.8570850 0.838506 0.6220676 0.646231 0.8395159 0.7224814 0.8431517 0.7215726 0.5175672 0.6273043 0.821562 0.7819981 0.8271493 0.6132871 0.5154468 0.66738890 0.4905660 0.6101062 0.8396951 0.6979111 0.7085273 0.6706389 0.8658281 0.7679886 2 0.757131 0.761960 -0.00853086 5 0.666127 0.687978 -2.1850e-02 0.67484406 0.31305911 insignificant 1.00000 1.000000 insignificant 0.83256145 0.24570020 insignificant 1.00000 1.000000 insignificant -0.06399658 0.27164486 lowCoverage 1.00000 lowCoverage 0.757131 0.6137500 0.1154901 5 0.666127 0.6475322 0.0185952 3.3559e-03 8.5343e-01 weaklyHypermeth 2.1651e-02 1.0000e+00 weaklyHypermeth 2.3157e-01 6.3268e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0129102 8.5393e-01 lowCoverage 1.0000e+00 lowCoverage 0.757131 0.708904 0.06391344 4 0.666127 0.641479 0.0246483 4.7735e-02 2.4394e-01 lowCoverage 7.8254e-01 1.0000e+00 lowCoverage 7.4550e-01 1.1541e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0919422 3.1048e-01 lowCoverage 1.0000e+00 lowCoverage 0.761082 0.6129838 0.13066282 5 0.601980 0.5665907 3.5390e-02 5.3239e-03 9.7238e-01 weaklyHypermeth 3.4348e-02 1.0000e+00 weaklyHypermeth 2.7437e-01 9.5037e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0510864 5.1564e-01 lowCoverage 1.0000e+00 lowCoverage 0.761960 0.708904 0.07144604 4 0.687978 0.641479 0.04649862 9.6947e-02 5.8004e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 5.9035e-01 3.4690e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0279456 7.6285e-01 lowCoverage 1.00000000 lowCoverage 0.6137500 0.708904 -0.0532324 4 0.6475322 0.641479 0.00605310 7.9170e-01 6.6515e-02 lowCoverage 1.0000e+00 3.5570e-01 lowCoverage 9.3324e-01 2.0469e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0790320 4.3736e-01 lowCoverage 1.00000000 lowCoverage chr1 16212031 16213031 334 C1orf64 ENSG00000183888 0.097255 439 20 0.0789576 630 28 0.077829 963 26 0.042782 388 23 0.028132 702 28 0.062292 1065 28 0.0212118 857 25 0.023035 595 23 0.0493908 901 28 0.044648 848 27 0.021070 756 23 0.022154 831 28 0.033214 648 25 0.0965961 460 18 0.0430058 982 29 0.031489 820 28 0.0285937 464 18 0.027139 494 23 0.095546 654 25 0.091097 642 28 0.047444 412 23 0.0735626 350 20 0.046253 427 26 0.066319 529 25 0.058407 235 15 0.0568014 1022 28 0.025189 695 24 0.105130 486 25 0.025306 695 27 0.0939723 1156 30 0.0364029 983 30 0.019420 856 28 0.0452850 429 26 0.0198723 501 21 0.0853432 713 20 0.050170 166 12 0.1069527 497 24 0.1332296 822 27 0.076495 525 24 0.1665372 441 26 0.0397749 229 16 0.0632475 579 22 0.0847571 385 20 0.0513802 0.0268529 0.106132 0.058513 0.041914 0.067708 0.045501 0.0435006 0.0385036 0.040264 0.048820 0.0438502 0.039279 0.0479821 0.0538320 0.0551531 0.0382960 0.0364417 0.0622183 0.0474670 0.101144 0.0904780 0.070208 0.0698742 0.0642987 0.0399918 0.0284595 0.0268987 0.0347979 0.039432 0.0269422 0.0301343 0.0828689 0.0273785 0.01885312 0.0345297 0.0807402 0.0929384 0.1326101 0.1230756 0.0887812 0.0866312 0.1118618 15 0.047400 0.042702 0.00401062 28 0.085001 0.071071 1.3930e-02 0.55327499 0.91211790 insignificant 1.00000 1.000000 insignificant 0.81629249 0.93313997 insignificant 1.00000 1.000000 insignificant -0.00374552 0.71277799 insignificant 1.00000 insignificant 0.047548 0.0802430 -0.0311392 27 0.115791 0.0903493 0.0254416 9.8298e-01 6.8074e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3214e-01 7.9729e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0227036 2.6265e-01 insignificant 1.0000e+00 insignificant 0.047454 0.105190 -0.06029842 26 0.097144 0.112602 -0.0154581 9.8538e-01 5.8469e-10 weaklyHypometh 1.0000e+00 1.1694e-07 weaklyHypometh 9.9587e-01 3.5616e-03 weaklyHypometh 1.0000e+00 1.3036e-01 insignificant -0.0353904 1.7843e-01 insignificant 1.0000e+00 insignificant 0.042735 0.0802686 -0.03460339 27 0.076833 0.0927912 -1.5958e-02 9.9266e-01 1.1880e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9092e-01 8.0252e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0189581 3.5201e-01 insignificant 1.0000e+00 insignificant 0.042540 0.105141 -0.06823437 26 0.069444 0.109475 -0.04003075 9.8845e-01 8.6974e-10 weaklyHypometh 1.0000e+00 1.7395e-07 weaklyHypometh 9.9594e-01 4.3218e-03 weaklyHypometh 1.0000e+00 3.6015e-01 insignificant -0.0316449 2.2383e-01 insignificant 1.00000000 insignificant 0.0801025 0.105190 -0.0249773 26 0.0923792 0.112602 -0.02022324 9.9806e-01 7.3675e-02 insignificant 1.0000e+00 3.8777e-01 insignificant 9.9936e-01 5.0999e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0126868 6.5804e-01 insignificant 1.00000000 insignificant chr1 16248131 16249131 337 CLCNKB ENSG00000184908 0.646167 127 4 0.5164743 86 6 0.627305 54 4 0.709225 133 8 0.506231 102 6 0.752724 92 4 0.6109754 79 6 0.575000 50 4 0.5717005 75 6 0.584473 72 5 0.598701 92 6 0.619938 75 6 0.595030 114 6 0.7619048 29 3 0.7093254 62 5 0.688485 39 5 0.4750000 17 1 0.725815 122 5 0.496863 51 4 0.364377 83 5 0.638889 31 2 0.3974359 50 4 0.777565 121 6 0.641667 34 2 0.508553 67 5 0.6652910 136 9 0.529365 36 4 0.339898 40 2 0.315675 37 4 0.7395916 137 6 0.4848447 168 9 0.673331 225 9 0.7657952 79 5 0.6184783 48 4 0.6692209 68 4 0.849327 78 6 0.7208400 63 6 0.7481705 171 9 0.658358 103 7 0.7712163 117 4 0.6337801 92 4 0.4704896 161 4 0.5942526 130 6 0.4818813 0.4903745 0.644399 0.515766 0.456892 0.555177 0.581237 0.5412879 0.4779413 0.646316 0.686250 0.5237282 0.464189 0.5097629 0.5977633 0.7309458 0.4619878 0.5422760 0.2430184 0.3878621 0.766414 0.3053127 0.724749 0.6321970 0.5079246 0.4141479 0.3122294 0.5381016 0.2884650 0.517508 0.3807312 0.6740599 0.5999703 0.6055009 0.84073494 0.6080404 0.7207119 0.5832961 0.4605956 0.4952914 0.4166782 0.5373279 0.4267493 2 0.576402 0.556586 0.02941467 6 0.724088 0.682321 4.1767e-02 0.00065521 0.97783575 weaklyHypermeth 0.17248 1.000000 insignificant 0.02605230 0.99931589 weaklyHypermeth 1.00000 1.000000 insignificant 0.04744349 0.35551604 lowCoverage 1.00000 lowCoverage 0.576501 0.7134387 -0.0967819 6 0.746497 0.8107960 -0.0642992 2.3211e-01 1.5709e-08 weaklyHypometh 1.0000e+00 1.4281e-06 weaklyHypometh 2.3469e-01 2.0922e-04 weaklyHypometh 1.0000e+00 1.9020e-02 weaklyHypometh -0.1218529 1.1603e-02 lowCoverage 1.4504e-01 lowCoverage 0.576577 0.514096 0.06005669 4 0.728074 0.520413 0.2076617 6.3273e-02 9.7474e-01 lowCoverage 9.4437e-01 1.0000e+00 lowCoverage 1.8276e-01 9.5075e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0188336 7.3836e-01 lowCoverage 1.0000e+00 lowCoverage 0.555659 0.7120316 -0.10475859 6 0.591412 0.7370872 -1.4568e-01 8.4587e-01 2.9757e-08 weaklyHypometh 1.0000e+00 3.7197e-06 weaklyHypometh 8.2254e-01 4.7006e-04 weaklyHypometh 1.0000e+00 4.2732e-02 weaklyHypometh -0.1692964 7.3634e-03 weaklyHypometh 9.8179e-02 weaklyHypometh 0.556586 0.515807 0.04207345 4 0.682321 0.615033 0.06728806 4.6819e-01 9.1942e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.6067e-01 2.4255e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0662771 3.3658e-01 insignificant 1.00000000 insignificant 0.7134387 0.516667 0.1569014 4 0.8107960 0.676537 0.13425941 4.6503e-10 9.1895e-01 lowCoverage 7.7505e-08 1.0000e+00 lowCoverage 5.7654e-03 7.2827e-01 lowCoverage 5.7654e-01 1.0000e+00 lowCoverage 0.1030193 1.2090e-01 insignificant 0.74627524 insignificant chr1 16339731 16340731 341 FAM131C ENSG00000185519 0.796832 178 10 0.8211283 214 9 0.633936 182 10 0.682748 139 9 0.552271 98 4 0.760363 281 10 0.7159091 146 8 0.661088 248 10 0.8389851 119 7 0.762712 168 10 0.739155 442 10 0.560070 105 3 0.714673 237 10 0.7147449 86 7 0.8135920 199 10 0.623611 32 2 0.5639098 46 2 0.653680 83 6 0.748931 268 10 0.751876 249 10 0.946009 82 6 0.5290476 57 6 0.812698 82 6 0.787879 86 6 0.779913 56 7 0.7031190 228 9 0.917096 96 7 0.699653 56 3 0.683631 150 8 0.8112254 255 10 0.7672142 253 10 0.666541 285 10 0.7273569 239 10 0.7480267 217 9 0.7229391 346 7 0.472222 17 0 0.6122024 88 9 0.6812776 236 10 0.715224 86 6 0.7217892 112 8 0.5349609 116 7 0.4759740 97 9 0.7551852 124 7 0.8253810 0.8542420 0.688335 0.662910 0.645286 0.853638 0.728161 0.8481640 0.8817734 0.895810 0.857688 0.7039646 0.863953 0.8354647 0.8579814 NA 0.8081697 0.7857143 0.8076662 0.8543133 0.903351 0.5140668 0.879721 0.9090038 0.8717719 0.8346333 0.8962175 0.8048372 0.8190411 0.837787 0.8203708 0.7711152 0.7028293 0.7229471 0.87681521 0.5927027 0.7123153 0.7435340 0.8416804 0.7592658 0.7075771 0.6309524 0.7691571 0 0.804261 0.785291 -0.01009309 10 0.708035 0.726267 -1.8232e-02 0.72883422 0.26056335 insignificant 1.00000 1.000000 insignificant 0.92389415 0.03430136 weaklyHypometh 1.00000 0.816699 insignificant -0.05315818 0.17838985 insignificant 1.00000 insignificant 0.804261 0.7314086 0.0761989 10 0.708035 0.7327187 -0.0246842 8.1062e-05 7.7240e-01 weaklyHypermeth 7.1736e-04 1.0000e+00 weaklyHypermeth 2.8203e-02 8.6324e-01 weaklyHypermeth 2.0002e-01 1.0000e+00 insignificant 0.0448399 3.6873e-01 insignificant 1.0000e+00 insignificant 0.804261 0.676636 0.06214492 9 0.708035 0.577005 0.1310297 1.1908e-08 9.6047e-01 weaklyHypermeth 1.2238e-06 1.0000e+00 weaklyHypermeth 2.7961e-02 9.3787e-01 weaklyHypermeth 6.8197e-01 1.0000e+00 insignificant 0.0648842 3.2634e-01 insignificant 1.0000e+00 insignificant 0.785291 0.7314086 0.06835758 10 0.726267 0.7327187 -6.4522e-03 3.4578e-03 9.2415e-01 weaklyHypermeth 2.3052e-02 1.0000e+00 weaklyHypermeth 1.4275e-02 9.9026e-01 weaklyHypermeth 1.0850e-01 1.0000e+00 insignificant 0.0979981 9.4990e-02 insignificant 6.5270e-01 insignificant 0.785291 0.676636 0.07868592 9 0.726267 0.577005 0.14926168 3.0866e-06 9.8408e-01 weaklyHypermeth 2.0577e-04 1.0000e+00 weaklyHypermeth 2.4576e-03 9.9487e-01 weaklyHypermeth 1.1326e-01 1.0000e+00 insignificant 0.1180423 1.1378e-01 insignificant 1.00000000 insignificant 0.7314086 0.676636 0.0213850 9 0.7327187 0.577005 0.15571391 1.6284e-01 7.0963e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.2194e-01 7.6789e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0200442 7.8387e-01 insignificant 1.00000000 insignificant chr1 16344831 16345831 342 FAM131C ENSG00000185519 0.101449 73 7 0.1517795 176 7 0.093778 227 7 0.130952 88 5 0.073243 134 7 0.118326 237 7 0.1391256 276 7 0.124044 239 7 0.0798351 297 7 0.113531 220 7 0.180025 248 7 0.076311 171 7 0.077676 206 7 0.0274471 63 2 0.0761454 191 7 0.050892 232 5 0.1873717 170 3 0.129630 105 6 0.055833 158 7 0.060386 197 7 0.098086 116 7 0.0238095 87 5 0.137623 118 7 0.123408 82 7 0.056022 51 4 0.0449481 268 7 0.108564 197 7 0.086861 134 7 0.104709 117 7 0.0658933 253 7 0.1516662 209 7 0.160160 279 7 0.0108696 181 7 0.0000000 81 7 0.0000000 105 4 0.127976 47 5 0.0853175 83 7 0.0080645 193 7 0.167642 71 5 0.0340476 98 5 0.0000000 45 3 0.0571047 74 5 0.0653439 84 5 0.0871861 0.1169802 0.092621 0.095657 0.045026 0.095201 0.075906 0.1117146 0.0674581 0.076737 0.091176 0.0757960 0.037925 0.0747919 0.0509238 0.0535169 0.3128199 0.0670884 0.0487435 0.0507521 0.084684 0.0041254 0.088633 0.0540051 0.0254320 0.0383875 0.0607322 0.0463421 0.0475899 0.044593 0.0837363 0.0998649 0.0253982 0.0000000 0.00000000 0.0698963 0.0356357 0.0188438 0.0912895 0.0415759 0.0000000 0.0619937 0.0440568 3 0.086863 0.085819 0.00332804 7 0.107779 0.100426 7.3527e-03 0.32295283 0.86352327 insignificant 1.00000 1.000000 insignificant 0.11335104 0.97660408 insignificant 1.00000 1.000000 insignificant 0.00557653 0.72554369 insignificant 1.00000 insignificant 0.086863 0.0246377 0.0693145 7 0.107779 0.0280468 0.0797321 1.3533e-05 9.9999e-01 weaklyHypermeth 1.3268e-04 1.0000e+00 weaklyHypermeth 8.6513e-07 9.9999e-01 weaklyHypermeth 2.2767e-05 1.0000e+00 weaklyHypermeth 0.0636844 3.4136e-02 weaklyHypermeth 3.4832e-01 insignificant 0.086910 0.056452 0.01796854 5 0.107779 0.071124 0.0366544 3.3304e-01 8.4963e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.8016e-02 9.9749e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0375614 2.6179e-01 lowCoverage 1.0000e+00 lowCoverage 0.085819 0.0246377 0.06899491 7 0.100426 0.0280468 7.2379e-02 3.7281e-05 9.9761e-01 weaklyHypermeth 3.5505e-04 1.0000e+00 weaklyHypermeth 8.4128e-04 9.9949e-01 weaklyHypermeth 1.0756e-02 1.0000e+00 weaklyHypermeth 0.0581079 5.1113e-02 insignificant 4.2952e-01 insignificant 0.085954 0.056604 0.00704571 5 0.112979 0.080015 0.03296443 3.5875e-01 7.0011e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.8044e-01 8.7614e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0319849 3.4023e-01 lowCoverage 1.00000000 lowCoverage 0.0247813 0.056604 -0.0363637 5 0.0315526 0.080015 -0.04846240 9.8585e-01 2.9554e-03 weaklyHypometh 1.0000e+00 2.5477e-02 weaklyHypometh 9.7579e-01 3.9658e-02 weaklyHypometh 1.0000e+00 3.1737e-01 insignificant -0.0261230 4.8665e-01 lowCoverage 1.00000000 lowCoverage chr1 16360831 16361831 343 EPHA2 ENSG00000142627 0.318661 340 15 0.2536438 568 17 0.242258 560 17 0.255653 332 14 0.183773 468 16 0.260647 407 15 0.1427318 730 16 0.165600 413 16 0.0890046 412 14 0.088304 343 14 0.165452 559 16 0.184250 445 14 0.118076 345 14 0.2979984 112 8 0.1158097 374 14 0.141055 450 14 0.1072682 286 7 0.369571 258 12 0.167535 395 14 0.299409 354 16 0.096609 200 16 0.2121284 75 5 0.173740 398 17 0.116774 280 14 0.253735 113 11 0.2381144 579 17 0.150184 274 15 0.060865 129 13 0.216735 297 14 0.2093345 594 17 0.2359053 492 17 0.129057 380 16 0.4584860 425 17 0.3292629 339 16 0.6256976 306 15 0.462037 47 7 0.4004745 247 15 0.3529003 450 17 0.307433 379 14 0.2629837 366 14 0.2940067 265 12 0.2709269 245 13 0.3617865 413 13 0.1097052 0.0964952 0.242883 0.131793 0.104585 0.105140 0.123646 0.0901665 0.0960218 0.078005 0.092498 0.1483239 0.089774 0.1325249 0.0925287 0.1174658 0.1061533 0.1483796 0.1043045 0.0948084 0.111950 0.1748381 0.118461 0.0910232 0.1227796 0.1300967 0.0975869 0.0988305 0.1181452 0.091040 0.0773271 0.0928840 0.4691792 0.3686423 0.68717772 0.3111848 0.4715754 0.3480012 0.1917691 0.2246246 0.1384888 0.1785404 0.2344430 10 0.103558 0.126675 0.01020275 15 0.321727 0.181195 1.4053e-01 0.02547108 0.97286301 weaklyHypermeth 1.00000 1.000000 insignificant 0.00604630 0.99994826 weaklyHypermeth 1.00000 1.000000 insignificant 0.02390326 0.36558814 insignificant 1.00000 insignificant 0.103033 0.4629834 -0.2974387 15 0.251963 0.4148967 -0.1629340 9.7308e-01 1.5337e-42 hypomethylated 1.0000e+00 5.1122e-40 hypomethylated 9.9840e-01 1.6726e-18 hypomethylated 1.0000e+00 4.1815e-16 hypomethylated -0.2398080 1.4842e-03 weaklyHypometh 2.9101e-02 weaklyHypometh 0.103228 0.206835 -0.08440636 15 0.262747 0.342975 -0.0802283 8.8874e-01 6.1852e-20 weaklyHypometh 1.0000e+00 6.1852e-17 weaklyHypometh 9.5171e-01 6.2915e-05 weaklyHypometh 1.0000e+00 8.9879e-03 weaklyHypometh -0.1010924 1.3738e-03 weaklyHypometh 5.2510e-02 weaklyHypometh 0.126283 0.4622173 -0.30477558 16 0.172079 0.3803220 -2.0824e-01 1.0000e+00 2.2248e-26 hypomethylated 1.0000e+00 7.4159e-24 hypomethylated 1.0000e+00 3.0984e-15 hypomethylated 1.0000e+00 1.3343e-12 hypomethylated -0.2637113 9.0388e-04 hypomethylated 1.8078e-02 hypomethylated 0.126775 0.206835 -0.09018366 15 0.196952 0.342975 -0.14602367 9.9908e-01 2.1669e-13 weaklyHypometh 1.0000e+00 6.7066e-11 weaklyHypometh 9.9988e-01 6.0086e-06 weaklyHypometh 1.0000e+00 1.0014e-03 weaklyHypometh -0.1249957 3.2114e-04 weaklyHypometh 0.05040966 weaklyHypometh 0.4629834 0.206359 0.2244968 15 0.4148967 0.313110 0.10178621 4.1128e-06 9.9970e-01 hypermethylated 4.5698e-04 1.0000e+00 hypermethylated 9.5912e-05 9.9996e-01 hypermethylated 1.4104e-02 1.0000e+00 hypermethylated 0.1387156 2.2852e-02 weaklyHypermeth 0.22851855 insignificant chr1 16587631 16588631 356 ENSG00000218185 0.833333 26 1 0.8012529 73 5 0.907143 37 3 0.604167 33 3 0.896503 43 5 0.863521 94 5 0.8882275 32 4 0.894643 50 3 0.9394737 46 5 0.756556 59 5 0.857882 74 5 0.761429 25 3 0.710182 66 5 0.6912821 35 5 0.8080808 48 3 0.918182 32 4 0.7370370 45 4 0.859506 126 5 0.684722 57 5 0.812874 48 4 0.817460 60 6 0.9000000 30 3 0.858442 40 3 0.761905 30 4 0.975000 51 5 0.7335013 151 5 0.631595 64 5 0.667415 69 5 0.743791 62 4 0.7317460 68 5 0.9130373 105 5 0.938145 127 5 0.8659341 37 2 0.8142157 51 4 0.6242750 77 5 0.950000 20 1 0.8566667 30 1 0.8148309 73 5 0.919799 42 4 0.9785714 53 4 0.8400000 34 3 0.8333333 25 1 0.7875000 56 5 0.8611111 0.7792946 0.878348 0.798177 0.865239 0.843773 0.863261 0.8615141 0.9206414 0.899567 0.845784 0.7269345 0.833070 0.7222222 0.7522096 0.9337121 0.8408565 0.8422888 0.6610966 0.8077107 0.826389 0.8881824 0.814259 0.7321429 0.9674479 0.8681444 0.7404095 0.7095820 0.8351716 0.730076 0.9031814 0.9099617 0.8254350 0.7741524 0.79304268 0.9348958 0.8085069 0.8175750 0.8964599 0.9709821 0.7916667 0.7829861 0.8007812 1 0.831268 0.837806 -0.02253564 5 0.775429 0.797052 -2.1623e-02 0.89112936 0.19656376 insignificant 1.00000 1.000000 insignificant 0.74136211 0.50645236 insignificant 1.00000 1.000000 insignificant 0.00529678 0.89060391 lowCoverage 1.00000 lowCoverage 0.831268 0.7916667 0.0267163 5 0.775429 0.6702790 0.1051496 6.3233e-02 4.8251e-01 insignificant 3.0997e-01 1.0000e+00 insignificant 5.5017e-01 4.2072e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0096872 8.4793e-01 lowCoverage 1.0000e+00 lowCoverage 0.831268 0.885714 -0.03269851 3 0.775429 0.883774 -0.1083458 9.6026e-01 1.5894e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.2977e-01 2.2919e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0605410 1.7093e-01 lowCoverage 1.0000e+00 lowCoverage 0.837806 0.7916667 0.05054628 5 0.797052 0.6702790 1.2677e-01 4.7260e-02 9.4748e-01 weaklyHypermeth 2.3396e-01 1.0000e+00 insignificant 6.1620e-01 6.5547e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0149840 7.8923e-01 lowCoverage 1.0000e+00 lowCoverage 0.837806 0.885714 -0.01548854 3 0.797052 0.883774 -0.08672235 7.9375e-01 2.6725e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.5918e-01 2.7828e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0658378 1.8708e-01 lowCoverage 1.00000000 lowCoverage 0.7916667 0.885714 -0.0710484 3 0.6702790 0.883774 -0.21349539 9.3453e-01 4.3453e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.9431e-01 7.8841e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0508538 3.8697e-01 lowCoverage 1.00000000 lowCoverage chr1 17822231 17823231 389 ARHGEF10L ENSG00000074964 0.877882 175 7 0.8958984 365 7 0.855221 317 7 0.965604 192 4 0.867320 232 7 0.929549 212 7 0.8635930 400 6 0.916175 325 7 0.9338601 275 7 0.924139 241 7 0.944002 362 7 0.954486 239 5 0.971332 278 7 1.0000000 10 1 0.9766127 299 7 0.942170 77 4 0.8215864 169 4 0.955938 185 7 0.901545 277 7 0.899430 188 7 0.878646 120 7 0.9696970 89 4 0.898333 187 7 0.985119 95 7 0.811045 189 4 0.9555564 434 7 0.921725 109 7 0.798454 71 4 0.869286 360 7 0.9302120 445 7 0.9441653 400 7 0.882693 261 7 0.9352324 281 7 0.9398965 237 7 0.7327044 161 4 1.000000 90 2 0.9258523 140 7 0.9006597 443 7 0.902027 102 7 0.8698019 203 5 0.9113976 167 5 0.9360283 122 5 0.9361472 123 5 0.9050071 0.9427601 0.902315 0.955060 0.887507 0.925472 0.906384 0.9213555 0.8957709 0.910330 0.955840 0.9375247 0.962359 0.9469663 0.9636979 0.9636615 0.7913017 0.9567035 0.9146634 0.9031297 0.927716 0.9618474 0.930453 0.9756526 0.9487950 0.9494548 0.9086437 0.8041728 0.8769932 0.931414 0.9457826 0.9023318 0.9363883 0.9629963 0.85730323 1.0000000 0.9308005 0.8010833 0.9182110 0.9113305 0.9257936 0.9459210 0.9649051 2 0.921911 0.930747 -0.01047400 7 0.923992 0.806159 1.1783e-01 0.86407526 0.05470341 insignificant 1.00000 0.994607 insignificant 0.60430197 0.03280871 weaklyHypometh 1.00000 0.816699 insignificant 0.01607285 0.43046710 insignificant 1.00000 insignificant 0.921911 0.9008876 0.0224191 7 0.923992 0.9133909 0.0106015 2.5925e-01 6.2136e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9988e-01 1.0909e-02 inconclusive 1.0000e+00 6.0607e-01 insignificant 0.0140930 7.2750e-01 insignificant 1.0000e+00 insignificant 0.921862 0.924686 -0.01148014 5 0.913134 0.923696 -0.0105620 7.5653e-01 1.2694e-02 weaklyHypometh 1.0000e+00 2.5387e-01 insignificant 7.1730e-01 1.2025e-02 weaklyHypometh 1.0000e+00 2.7965e-01 insignificant 0.0087369 5.9920e-01 insignificant 1.0000e+00 insignificant 0.931085 0.9008142 0.03201443 7 0.921325 0.9010182 2.0306e-02 1.0381e-01 1.2961e-01 insignificant 4.8059e-01 1.0000e+00 insignificant 9.2978e-01 4.3589e-02 inconclusive 1.0000e+00 1.0000e+00 insignificant -0.0019799 9.6264e-01 insignificant 1.0000e+00 insignificant 0.931085 0.924686 -0.01749112 5 0.921325 0.923696 -0.00237169 6.1427e-01 1.4975e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.6764e-01 1.4922e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0073360 7.3209e-01 insignificant 1.00000000 insignificant 0.9008142 0.924686 -0.0304250 5 0.9010182 0.923696 -0.02267802 7.9550e-01 1.1921e-01 insignificant 1.0000e+00 5.9017e-01 insignificant 2.9042e-01 7.2801e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0053561 8.9545e-01 insignificant 1.00000000 insignificant chr1 17965931 17966931 390 ACTL8 ENSG00000117148 0.922254 220 7 0.8516883 354 7 0.890204 213 7 0.923403 195 7 0.901134 154 7 0.914670 385 7 0.8838287 186 7 0.784865 217 7 0.8609582 161 7 0.898778 191 7 0.901172 325 7 0.933885 117 7 0.903416 218 7 0.9185101 107 4 0.8927686 225 7 0.820779 106 7 0.9216667 42 3 0.894227 270 7 0.812276 248 7 0.871987 280 7 0.812069 119 7 0.8941463 109 7 0.923091 167 7 0.827272 177 7 0.810727 91 7 0.9142980 224 7 0.744092 228 7 0.813043 134 7 0.759918 183 7 0.9083423 339 7 0.7890350 267 7 0.918243 395 7 0.7312840 249 7 0.8558193 107 7 0.9778912 184 7 0.674784 49 5 0.8500185 164 8 0.6464102 202 7 0.853270 202 7 0.9171131 171 7 0.8239673 192 7 0.8482538 225 7 0.8467265 240 7 0.9253004 0.8556330 0.875461 0.924655 0.907117 0.918384 0.888068 0.9005164 0.8657314 0.901866 0.877721 0.9266765 0.903366 0.8956565 0.8886391 0.8274232 0.9204808 0.8977036 0.9311894 0.8996621 0.917897 0.8858593 0.927647 0.9383741 0.9200203 0.9133836 0.7913068 0.9265857 0.8839867 0.904748 0.9031560 0.9145119 0.7842236 0.8609258 0.97908927 0.6976771 0.8687106 0.7610405 0.8592920 0.9141619 0.8389824 0.8470527 0.8586316 7 0.898386 0.903000 -0.00788386 7 0.870933 0.809922 6.1012e-02 0.32158970 0.48839505 insignificant 1.00000 1.000000 insignificant 0.64441775 0.61379915 insignificant 1.00000 1.000000 insignificant 0.04226724 0.05987824 insignificant 1.00000 insignificant 0.898386 0.8586387 0.0354263 7 0.870933 0.8034670 0.0674662 1.6503e-03 2.2323e-01 weaklyHypermeth 1.1382e-02 1.0000e+00 weaklyHypermeth 6.5694e-02 3.3805e-01 insignificant 3.8956e-01 1.0000e+00 insignificant 0.0957558 1.2499e-01 insignificant 8.6798e-01 insignificant 0.898386 0.846602 0.03432488 7 0.870933 0.873742 -0.0028089 1.8849e-04 7.7068e-01 weaklyHypermeth 6.4998e-03 1.0000e+00 weaklyHypermeth 5.2544e-03 9.1974e-01 weaklyHypermeth 2.2134e-01 1.0000e+00 insignificant 0.0272574 1.7555e-01 insignificant 1.0000e+00 insignificant 0.903000 0.8586387 0.04356375 7 0.809922 0.8034670 6.4546e-03 3.7794e-02 2.5530e-01 weaklyHypermeth 1.9235e-01 1.0000e+00 insignificant 1.3053e-01 2.5450e-01 insignificant 6.8701e-01 1.0000e+00 insignificant 0.0534886 3.6746e-01 insignificant 1.0000e+00 insignificant 0.903000 0.846602 0.04400409 7 0.809922 0.873742 -0.06382049 3.8783e-03 6.9076e-01 weaklyHypermeth 8.9050e-02 1.0000e+00 weaklyHypermeth 1.9160e-02 8.5444e-01 weaklyHypermeth 4.4557e-01 1.0000e+00 insignificant -0.0150098 5.4990e-01 insignificant 1.00000000 insignificant 0.8586387 0.846602 -0.0137672 7 0.8034670 0.873742 -0.07027509 3.0271e-01 4.9240e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.4861e-01 5.5205e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0684984 2.5350e-01 insignificant 1.00000000 insignificant chr1 20833931 20834931 442 PINK1 ENSG00000158828 0.764343 430 12 0.7066789 192 10 0.709713 171 12 0.738818 278 11 0.680657 105 11 0.669606 412 9 0.6706264 164 11 0.585621 140 10 0.7116582 96 7 0.650727 117 11 0.709738 394 12 0.607359 88 11 0.824453 154 11 0.6148810 64 6 0.7320256 122 10 0.710831 87 12 0.4031086 200 5 0.745608 346 13 0.759255 172 12 0.757109 230 9 0.682651 105 8 0.8546832 71 6 0.736431 202 12 0.660696 84 7 0.749846 123 9 0.6532103 260 12 0.759515 128 9 0.686625 88 6 0.742399 170 9 0.6839264 227 12 0.6815173 236 12 0.566730 300 9 0.6145828 225 11 0.5068898 141 11 0.7090444 195 9 0.716330 49 3 0.7176658 177 10 0.5485445 218 12 0.795988 327 11 0.8018669 343 11 0.7622073 321 11 0.8361994 287 8 0.7258356 267 11 0.8335040 0.7692241 0.699616 0.832016 0.782413 0.744175 0.744319 0.7245236 0.7744220 0.760744 0.785330 0.7082865 0.840019 0.6573772 0.7999427 0.7681946 0.6633577 0.8079880 0.8002193 0.8138427 0.775397 0.8355402 0.789506 0.7740653 0.8215912 0.7665409 0.7863710 0.7701214 0.7989374 0.802821 0.7466096 0.7684595 0.7560365 0.5985488 0.75092644 0.6592804 0.7986065 0.6518170 0.8096591 0.8677950 0.7897547 0.9316497 0.8073952 3 0.752590 0.754764 0.00925815 12 0.703464 0.673732 2.9732e-02 0.18042862 0.62420914 insignificant 1.00000 1.000000 insignificant 0.76031787 0.24292087 insignificant 1.00000 1.000000 insignificant -0.01721165 0.55139979 insignificant 1.00000 insignificant 0.752590 0.6895522 0.0757876 11 0.703464 0.6114212 0.0920430 6.6876e-06 9.9729e-01 weaklyHypermeth 6.8945e-05 1.0000e+00 weaklyHypermeth 2.2188e-02 9.8860e-01 weaklyHypermeth 1.6497e-01 1.0000e+00 insignificant 0.0521313 2.5859e-01 insignificant 1.0000e+00 insignificant 0.752590 0.801942 -0.05033202 11 0.703464 0.764121 -0.0606570 9.9793e-01 8.6656e-04 weaklyHypometh 1.0000e+00 4.0343e-02 weaklyHypometh 9.9991e-01 1.8439e-04 weaklyHypometh 1.0000e+00 1.6763e-02 weaklyHypometh -0.0967786 3.1885e-03 weaklyHypometh 9.3780e-02 weaklyHypometh 0.754764 0.6895522 0.06698276 11 0.673732 0.6114212 6.2311e-02 9.1321e-05 9.9461e-01 weaklyHypermeth 8.0815e-04 1.0000e+00 weaklyHypermeth 1.9436e-03 9.9759e-01 weaklyHypermeth 2.0899e-02 1.0000e+00 weaklyHypermeth 0.0693430 1.4647e-01 insignificant 8.9858e-01 insignificant 0.754764 0.801942 -0.05797780 11 0.673732 0.764121 -0.09038887 9.9047e-01 2.2659e-04 weaklyHypometh 1.0000e+00 1.7430e-02 weaklyHypometh 9.9610e-01 1.3010e-02 weaklyHypometh 1.0000e+00 6.5250e-01 insignificant -0.0795670 1.3587e-02 weaklyHypometh 0.32059312 insignificant 0.6895522 0.801942 -0.1223581 10 0.6114212 0.764121 -0.15270003 1.0000e+00 2.5208e-06 weaklyHypometh 1.0000e+00 5.2517e-05 weaklyHypometh 1.0000e+00 4.1591e-04 weaklyHypometh 1.0000e+00 9.6723e-03 weaklyHypometh -0.1489099 9.3295e-03 weaklyHypometh 0.13924645 insignificant chr1 21522531 21523531 461 ECE1 ENSG00000117298 0.869645 282 5 0.6157821 166 5 0.730000 75 4 0.802688 198 5 0.750455 68 5 0.778253 249 4 0.7714896 94 5 0.764729 102 5 0.7528854 77 5 0.794444 55 5 0.782664 206 5 0.766667 45 4 0.813711 94 5 0.6461111 38 4 0.7759259 81 5 0.794771 36 4 0.9415584 29 2 0.838775 214 5 0.911940 100 4 0.848426 222 4 0.849474 67 4 0.9057190 53 3 0.654064 145 5 0.870085 72 4 0.895906 77 5 0.6906533 173 5 0.838611 89 4 0.687121 64 5 0.764810 116 5 0.8137879 139 5 0.8127465 157 5 0.701347 283 4 0.6380254 164 5 0.6143286 92 4 0.6513049 173 5 0.627059 62 3 0.7198008 129 4 0.6127482 170 5 0.778219 260 5 0.7449658 255 5 0.8014881 218 5 0.7676565 164 5 0.8278587 201 5 0.8949591 0.7602081 0.789628 0.835385 0.772969 0.845718 0.843210 0.8268060 0.7667865 0.820035 0.843730 0.8053191 0.814899 0.8334318 0.7480750 0.7521020 0.8780387 0.8288872 0.8974480 0.8542711 0.921053 0.8662955 0.838647 0.8734088 0.8915454 0.8733325 0.8469523 0.8616054 0.7939408 0.800697 0.8329116 0.8509168 0.6180080 0.5439465 0.68916409 0.7163851 0.6650254 0.6521988 0.7864837 0.7602306 0.8252834 0.8032352 0.8653693 3 0.827643 0.843902 -0.01494666 5 0.717368 0.618189 9.9179e-02 0.98202916 0.38185160 insignificant 1.00000 1.000000 insignificant 0.97373033 0.10905533 insignificant 1.00000 1.000000 insignificant -0.00281449 0.92762763 lowCoverage 1.00000 lowCoverage 0.828183 0.6000000 0.2043221 5 0.804315 0.6512948 0.1530205 1.0485e-13 8.1847e-01 hypermethylated 2.1398e-12 1.0000e+00 hypermethylated 2.6745e-06 8.6344e-01 hypermethylated 6.2198e-05 1.0000e+00 hypermethylated 0.1436682 1.3096e-05 lowCoverage 4.6772e-04 lowCoverage 0.828183 0.778689 0.03598204 5 0.804315 0.779015 0.0253008 1.8223e-02 7.0403e-01 weaklyHypermeth 3.5732e-01 1.0000e+00 insignificant 1.8266e-01 4.7397e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0035084 8.7630e-01 lowCoverage 1.0000e+00 lowCoverage 0.846746 0.6000000 0.22620113 5 0.815465 0.6512948 1.6417e-01 2.1427e-13 6.5325e-01 hypermethylated 5.6388e-12 1.0000e+00 hypermethylated 9.3446e-07 9.7719e-01 hypermethylated 2.7484e-05 1.0000e+00 hypermethylated 0.1464827 1.7927e-04 lowCoverage 4.9822e-03 lowCoverage 0.846746 0.778689 0.05613696 5 0.815465 0.779015 0.03645063 6.2714e-04 7.7800e-01 weaklyHypermeth 2.0905e-02 1.0000e+00 weaklyHypermeth 9.8328e-03 9.2481e-01 weaklyHypermeth 2.6575e-01 1.0000e+00 insignificant 0.0063229 8.3123e-01 lowCoverage 1.00000000 lowCoverage 0.6000000 0.778689 -0.1821738 5 0.6512948 0.779015 -0.12771971 7.2113e-01 3.7535e-06 weaklyHypometh 1.0000e+00 7.5070e-05 weaklyHypometh 9.6474e-01 1.4630e-03 weaklyHypometh 1.0000e+00 2.4796e-02 weaklyHypometh -0.1401598 1.1511e-04 lowCoverage 0.00608999 lowCoverage chr1 21524131 21525131 462 ECE1 ENSG00000117298 0.693095 243 5 0.5884058 85 5 0.727000 93 5 0.776480 291 5 0.578596 65 4 0.807745 290 5 0.7710352 84 5 0.810833 60 5 0.7975439 78 5 0.876532 59 5 0.831950 161 5 0.737262 63 5 0.685714 115 5 NA 0 0 0.7130952 85 5 0.733333 11 0 0.8377778 39 5 0.726780 362 5 0.612244 91 5 0.680676 227 5 0.773016 48 5 0.6265217 121 5 0.705079 139 5 0.833939 45 4 0.676987 83 5 0.6973044 181 5 0.734156 109 4 0.750606 42 4 0.829809 104 5 0.6016245 187 5 0.6296500 186 5 0.820396 285 5 0.4684085 102 5 0.3860963 123 5 0.3333333 8 0 0.702002 60 4 0.6100000 48 5 0.4389527 121 5 0.629951 308 5 0.7964163 356 5 0.6587567 290 5 0.7423270 314 5 0.6962837 270 5 0.6755173 0.5546324 0.713325 0.744832 0.672858 0.763192 0.738528 0.8120855 0.7542941 0.856011 0.799380 0.7297494 0.624408 NA 0.6628646 0.6579407 0.8318790 0.6899178 0.5941194 0.6431705 0.716862 0.5799954 0.669054 0.7902586 0.6231339 0.6574206 0.7456427 0.7629224 0.8304653 0.571599 0.6249433 0.7894730 0.4601392 0.4020354 0.38549681 0.7100615 0.5654450 0.3995121 0.5719486 0.7783000 0.6113223 0.6880567 0.6712091 4 0.704237 0.689542 0.01544843 5 0.741582 0.719422 2.2161e-02 0.30207863 0.86819204 insignificant 1.00000 1.000000 insignificant 0.38170516 0.90893127 insignificant 1.00000 1.000000 insignificant 0.01285313 0.67538499 lowCoverage 1.00000 lowCoverage 0.704237 0.4761905 0.2377586 5 0.741582 0.4955771 0.2460052 6.1928e-13 9.9996e-01 hypermethylated 1.1909e-11 1.0000e+00 hypermethylated 1.2803e-05 9.7973e-01 hypermethylated 2.5606e-04 1.0000e+00 hypermethylated 0.2463117 6.0478e-03 lowCoverage 8.2847e-02 lowCoverage 0.704237 0.648244 0.04653690 5 0.741582 0.705308 0.0362746 3.1973e-02 2.3488e-01 weaklyHypermeth 5.6093e-01 1.0000e+00 insignificant 5.5754e-02 3.9928e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0313636 4.0171e-01 lowCoverage 1.0000e+00 lowCoverage 0.689542 0.4761905 0.21932836 5 0.719422 0.4955771 2.2384e-01 1.1474e-07 9.9998e-01 hypermethylated 1.5937e-06 1.0000e+00 hypermethylated 4.3331e-05 9.2428e-01 hypermethylated 7.6020e-04 1.0000e+00 hypermethylated 0.2334586 7.3624e-03 lowCoverage 9.8179e-02 lowCoverage 0.689542 0.648244 0.03045323 5 0.719422 0.705308 0.01411397 3.6462e-01 1.8714e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.0469e-01 4.1057e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0185105 6.3574e-01 lowCoverage 1.00000000 lowCoverage 0.4761905 0.648244 -0.1927558 5 0.4955771 0.705308 -0.20973055 9.9958e-01 7.9329e-05 weaklyHypometh 1.0000e+00 1.1194e-03 weaklyHypometh 9.8977e-01 6.1950e-04 weaklyHypometh 1.0000e+00 1.2906e-02 weaklyHypometh -0.2149480 1.1450e-02 lowCoverage 0.15472470 lowCoverage chr1 21736431 21737431 468 ALPL ENSG00000162551 0.725658 127 7 0.5639425 302 7 0.729388 178 7 0.565897 122 7 0.644008 136 5 0.745908 264 7 0.6643563 181 7 0.627359 181 5 0.6255612 136 5 0.675810 157 5 0.629475 406 7 0.624144 65 5 0.614854 228 5 0.6657895 65 3 0.6932900 157 7 0.084444 22 3 0.5611111 81 3 0.809490 114 7 0.792631 329 7 0.560814 249 7 0.855288 68 5 0.5833333 14 0 0.586486 175 7 0.690747 105 7 0.866667 10 0 0.7297316 410 7 0.669598 123 7 0.513646 82 6 0.619126 272 7 0.6210184 407 7 0.6769782 408 7 0.722301 243 7 0.2637376 326 7 0.5995169 276 7 0.4412170 398 7 1.000000 13 0 0.4464603 262 7 0.4032257 537 7 0.820646 190 7 0.6772692 188 7 0.7014501 86 6 0.7852953 138 7 0.7070393 105 6 0.7593925 0.5594319 0.721082 0.483088 0.653302 0.759835 0.634687 0.6195269 0.5203204 0.611644 0.591510 0.6552193 0.459680 0.5693007 0.7050303 0.1438924 0.6072417 0.7493918 0.7438389 0.5342138 0.824638 0.6313135 0.543588 0.6718182 0.8212919 0.6949926 0.6122648 0.5881930 0.5559125 0.528027 0.5701526 0.7210263 0.1997189 0.6259267 0.43477263 0.9918570 0.4950655 0.3491662 0.7846462 0.6959505 0.6197931 0.7348108 0.6491304 2 0.637714 0.662063 -0.00936753 7 0.653256 0.675396 -2.2139e-02 0.70616295 0.08088589 insignificant 1.00000 1.000000 insignificant 0.82513240 0.30284713 insignificant 1.00000 1.000000 insignificant -0.04771340 0.29787523 insignificant 1.00000 insignificant 0.637714 0.4050773 0.2191483 7 0.653256 0.4150133 0.2382431 3.4747e-18 9.7103e-01 hypermethylated 9.3912e-17 1.0000e+00 hypermethylated 1.0476e-04 6.7243e-01 hypermethylated 1.6117e-03 1.0000e+00 hypermethylated 0.1045036 3.7689e-01 insignificant 1.0000e+00 insignificant 0.637714 0.746818 -0.09074300 7 0.653256 0.740987 -0.0877307 9.9934e-01 1.2192e-03 weaklyHypometh 1.0000e+00 4.8766e-02 weaklyHypometh 9.9397e-01 7.4960e-03 weaklyHypometh 1.0000e+00 2.1431e-01 insignificant -0.1081435 2.2410e-02 weaklyHypometh 3.9315e-01 insignificant 0.662063 0.4050773 0.25205081 7 0.675396 0.4150133 2.6038e-01 6.4912e-18 9.6441e-01 hypermethylated 2.4042e-16 1.0000e+00 hypermethylated 4.2035e-04 8.4584e-01 hypermethylated 5.8382e-03 1.0000e+00 hypermethylated 0.1522170 2.1251e-01 insignificant 1.0000e+00 insignificant 0.662063 0.746818 -0.07190951 7 0.675396 0.740987 -0.06559151 8.4704e-01 2.4092e-03 weaklyHypometh 1.0000e+00 1.0951e-01 insignificant 9.2634e-01 3.9508e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0604301 1.6490e-01 insignificant 1.00000000 insignificant 0.4050773 0.746818 -0.3429443 7 0.4150133 0.740987 -0.32597385 9.9999e-01 1.5196e-10 hypomethylated 1.0000e+00 6.3317e-09 hypomethylated 9.8751e-01 3.5272e-03 weaklyHypometh 1.0000e+00 5.2645e-02 weaklyHypometh -0.2126471 9.9236e-02 insignificant 0.64023457 insignificant chr1 21806531 21807531 469 ENSG00000221781 0.351680 552 14 0.2373451 338 14 0.311467 570 16 0.362616 566 14 0.294151 420 16 0.290666 775 17 0.2872565 601 16 0.303100 405 15 0.3461593 559 15 0.343896 471 14 0.299347 372 15 0.322318 417 16 0.338855 519 14 0.3359246 190 10 0.3530008 538 13 0.291667 363 14 0.2012765 333 8 0.286984 654 13 0.314457 278 14 0.280768 606 16 0.305482 258 14 0.3284751 358 15 0.346331 465 14 0.309237 224 14 0.376714 237 13 0.2951819 508 14 0.329571 431 16 0.402775 233 12 0.292303 276 13 0.2882715 490 16 0.3083817 385 16 0.366059 768 16 0.3262360 382 16 0.2767961 444 14 0.3773548 331 9 0.200121 158 7 0.2574221 219 15 0.3893881 471 14 0.355802 849 14 0.3779571 621 13 0.3330355 495 12 0.3101837 620 13 0.3333102 682 14 0.2714288 0.2066022 0.277315 0.298410 0.248157 0.268311 0.298457 0.3017001 0.2941374 0.320757 0.276179 0.3076757 0.291130 0.2732369 0.2777683 0.2863194 0.2953072 0.2584501 0.3080132 0.2972587 0.282516 0.2977020 0.297810 0.3190257 0.2884481 0.2834888 0.2883037 0.3255759 0.2863611 0.279888 0.3003883 0.3216613 0.2968269 0.2652184 0.28843509 0.3061579 0.2888530 0.3468617 0.3084586 0.3249903 0.2822538 0.2904005 0.3330990 12 0.233757 0.247140 -0.01161174 14 0.278053 0.339766 -6.1713e-02 0.94591605 0.00243301 weaklyHypometh 1.00000 0.347573 insignificant 0.76202754 0.02147985 weaklyHypometh 1.00000 0.716057 insignificant -0.02141851 0.13597623 insignificant 1.00000 insignificant 0.233620 0.3486284 -0.0020879 14 0.260389 0.2945507 -0.0341619 5.0180e-01 2.3834e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 6.7655e-01 4.4866e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0030937 9.2437e-01 insignificant 1.0000e+00 insignificant 0.233270 0.236737 -0.02598171 13 0.284065 0.327900 -0.0438349 9.5096e-01 5.2236e-07 weaklyHypometh 1.0000e+00 5.2236e-05 weaklyHypometh 9.4042e-01 1.4219e-04 weaklyHypometh 1.0000e+00 1.5053e-02 weaklyHypometh -0.0344110 4.1109e-02 weaklyHypometh 5.6801e-01 insignificant 0.246978 0.3486284 0.00938880 14 0.309755 0.2945507 1.5204e-02 1.0791e-01 1.5049e-01 insignificant 4.9398e-01 1.0000e+00 insignificant 4.2705e-01 5.9714e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0245122 4.6816e-01 insignificant 1.0000e+00 insignificant 0.246745 0.236737 -0.01222545 13 0.322108 0.327900 -0.00579196 6.7711e-01 1.2335e-03 weaklyHypometh 1.0000e+00 6.6304e-02 weaklyHypometh 8.9679e-01 3.2210e-02 weaklyHypometh 1.0000e+00 9.7606e-01 insignificant -0.0129925 4.2488e-01 insignificant 1.00000000 insignificant 0.3470618 0.236737 -0.0324284 13 0.2690973 0.327900 -0.05880253 8.4015e-01 4.1885e-02 weaklyHypometh 1.0000e+00 2.4352e-01 insignificant 9.9131e-01 1.5971e-01 insignificant 1.0000e+00 9.0230e-01 insignificant -0.0375047 2.8374e-01 insignificant 1.00000000 insignificant chr1 21810531 21811531 470 ENSG00000221781 0.873504 95 4 0.8698565 122 5 0.902584 88 5 0.643197 67 4 0.922129 77 5 0.882446 206 5 0.8393939 74 5 0.871930 126 5 0.8698923 94 5 0.931884 90 5 0.855034 294 5 0.625455 24 2 0.853325 106 2 0.8872549 43 1 0.8867117 134 5 1.000000 11 1 0.4166667 10 0 0.740338 102 4 0.942091 203 5 0.823567 194 5 0.725379 75 5 0.7849359 38 2 0.781902 100 5 0.782143 91 5 0.973333 22 1 0.9089027 188 5 0.858611 105 5 0.859127 41 3 0.938281 160 5 0.9844961 140 5 0.9349745 214 5 0.965295 174 5 0.7106747 134 5 0.7571717 132 5 0.5974529 193 5 0.312500 10 1 0.7464646 107 5 0.7657792 258 5 0.880483 139 4 0.9833333 143 5 0.7259615 67 4 0.7508197 65 1 0.9913793 82 4 0.9033929 0.8724083 0.822019 0.930241 0.922078 0.920909 0.947811 0.7852537 0.8639496 0.863636 0.898892 0.7162534 0.854864 0.8835413 0.8963964 0.9829806 0.9829806 0.9525692 0.9320435 0.9094890 0.687672 0.8895882 0.958570 0.9783550 0.8909091 0.8110714 0.7650253 0.9220779 0.9212790 0.923890 0.9097501 0.9454383 0.8718864 0.8702479 0.93862210 0.6676634 0.8887052 0.2852814 0.8109751 0.9318182 0.8607226 0.7382017 0.9717868 1 0.879630 0.902819 -0.02518261 5 0.768516 0.809783 -4.1267e-02 0.90609267 0.00478848 weaklyHypometh 1.00000 0.405825 insignificant 0.92817934 0.00310627 weaklyHypometh 1.00000 0.310627 insignificant -0.04291866 0.28430082 lowCoverage 1.00000 lowCoverage 0.879630 0.6426859 0.2709034 5 0.768516 0.5557251 0.2127907 8.7746e-08 7.9782e-01 hypermethylated 1.1107e-06 1.0000e+00 hypermethylated 1.3546e-02 7.5000e-01 weaklyHypermeth 1.1195e-01 1.0000e+00 insignificant 0.1835225 5.1168e-02 lowCoverage 4.6517e-01 lowCoverage 0.881206 0.885081 0.01250341 4 0.882219 0.924843 -0.0426244 6.4377e-01 1.6651e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.7019e-01 7.2186e-02 lowCoverage 1.0000e+00 9.1375e-01 lowCoverage -0.0345325 6.0417e-01 lowCoverage 1.0000e+00 lowCoverage 0.902819 0.6426859 0.27843505 5 0.809783 0.5557251 2.5406e-01 8.0516e-08 9.8220e-01 hypermethylated 1.1340e-06 1.0000e+00 hypermethylated 9.0118e-04 9.6192e-01 hypermethylated 1.1126e-02 1.0000e+00 hypermethylated 0.2264411 2.3460e-02 lowCoverage 2.3000e-01 lowCoverage 0.910045 0.885081 0.01114329 4 0.928883 0.924843 0.00403940 5.5548e-01 5.1753e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.3336e-01 5.2808e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0083862 8.9623e-01 lowCoverage 1.00000000 lowCoverage 0.6442308 0.885081 -0.2370134 4 0.6668702 0.924843 -0.25797320 7.5252e-01 1.6581e-02 lowCoverage 1.0000e+00 1.0909e-01 lowCoverage 9.0201e-01 1.0747e-01 lowCoverage 1.0000e+00 6.5532e-01 lowCoverage -0.2180549 4.0602e-02 lowCoverage 0.33829170 lowCoverage chr1 21832531 21833531 473 RAP1GAP ENSG00000076864 0.805936 384 10 0.8191261 222 10 0.773526 238 10 0.843244 253 6 0.817364 113 7 0.761569 288 7 0.7851179 179 10 0.869807 354 10 0.7846049 359 10 0.907478 400 10 0.856631 299 10 0.793091 123 8 0.818978 447 10 0.8685873 257 8 0.8518621 218 10 0.788617 67 5 0.6208333 88 5 0.815318 330 8 0.833162 322 10 0.813973 338 10 0.790347 164 10 0.7727128 208 10 0.829266 215 10 0.691085 83 6 0.873930 208 7 0.7981906 354 10 0.736667 246 10 0.752083 140 7 0.760716 287 10 0.8299931 510 10 0.8327808 257 10 0.906623 384 10 0.4272845 298 10 0.3748639 167 7 0.3815789 116 5 0.513031 145 7 0.5280083 225 10 0.6333498 309 9 0.786063 277 9 0.8359563 265 10 0.7811281 311 10 0.8680597 240 9 0.9340253 209 10 0.7934097 0.8364697 0.734797 0.838674 0.777629 0.794978 0.808137 0.8085843 0.7381368 0.899681 0.836060 0.8011768 0.777159 0.8246321 0.8599917 0.7962800 0.6885202 0.8110385 0.8105917 0.7830045 0.895151 0.6932901 0.870298 0.8503941 0.8413172 0.7798242 0.7447425 0.8671152 0.7586532 0.824346 0.8147349 0.9007706 0.4312296 0.3462691 0.47133734 0.5378490 0.5402038 0.6074224 0.7243991 0.8298712 0.7737874 0.8436109 0.8983251 4 0.810760 0.808573 0.00201129 10 0.842387 0.746884 9.5503e-02 0.73448292 0.81321911 insignificant 1.00000 1.000000 insignificant 0.49153784 0.56599648 insignificant 1.00000 1.000000 insignificant 0.01357496 0.53841167 insignificant 1.00000 insignificant 0.810688 0.5158730 0.2954004 10 0.826625 0.5074354 0.3191900 3.9140e-36 1.0000e+00 hypermethylated 2.1744e-34 1.0000e+00 hypermethylated 2.4574e-13 1.0000e+00 hypermethylated 2.3833e-11 1.0000e+00 hypermethylated 0.3350885 2.2786e-04 hypermethylated 5.5575e-03 hypermethylated 0.810688 0.774194 0.01229478 10 0.826625 0.823167 0.0034582 3.4074e-01 1.2442e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6937e-01 4.5508e-02 inconclusive 1.0000e+00 6.5012e-01 insignificant -0.0296052 3.7941e-01 insignificant 1.0000e+00 insignificant 0.809633 0.5158730 0.30397219 10 0.821573 0.5074354 3.1414e-01 5.8977e-24 1.0000e+00 hypermethylated 2.5642e-22 1.0000e+00 hypermethylated 1.2918e-12 1.0000e+00 hypermethylated 2.5836e-10 1.0000e+00 hypermethylated 0.3215135 1.9003e-04 hypermethylated 5.1360e-03 hypermethylated 0.809633 0.774194 0.01809595 10 0.821573 0.823167 -0.00159460 7.5416e-01 1.3671e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.3406e-01 6.0638e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0431801 2.3380e-01 insignificant 1.00000000 insignificant 0.5158730 0.774194 -0.2717334 10 0.5074354 0.823167 -0.31573180 1.0000e+00 1.7262e-14 hypomethylated 1.0000e+00 1.0789e-12 hypomethylated 1.0000e+00 6.1501e-09 hypomethylated 1.0000e+00 8.7859e-07 hypomethylated -0.3646936 6.0249e-05 hypomethylated 0.00463454 hypomethylated chr1 21838431 21839431 474 RAP1GAP ENSG00000076864 0.703445 230 10 0.4260944 261 13 0.476053 252 11 0.631634 229 9 0.636059 200 13 0.724318 413 12 0.7001194 238 13 0.398506 316 11 0.4537474 222 13 0.737180 193 11 0.708512 516 13 0.543955 180 10 0.384364 315 13 0.5666667 60 6 0.5305297 285 13 0.454124 134 13 0.2986556 151 6 0.520881 302 9 0.567579 346 13 0.557240 232 12 0.756313 176 11 0.4952076 89 3 0.720757 235 11 0.728512 157 14 0.583849 69 6 0.6704918 331 11 0.650096 232 12 0.674725 53 7 0.566942 298 12 0.4813820 377 13 0.4691097 444 11 0.741888 364 13 0.0366964 380 13 0.0117919 361 13 0.1470588 302 9 0.000000 111 3 0.0891456 216 11 0.0435789 476 12 0.501236 270 11 0.7166044 333 12 0.5465399 194 6 0.5673552 331 10 0.5378425 276 9 0.7340843 0.3571178 0.453943 0.603973 0.581226 0.722636 0.762476 0.4170442 0.4131252 0.647512 0.671160 0.4698569 0.310997 0.5367203 0.4496479 0.4291734 0.3098019 0.5170312 0.4939169 0.5832543 0.823433 0.5347230 0.759077 0.5721416 0.5796041 0.6301543 0.7413962 0.6810390 0.5252503 0.444742 0.4277698 0.7791263 0.0305299 0.0158730 0.05658056 0.0084968 0.0633679 0.0292452 0.5369402 0.5643680 0.4466473 0.5013458 0.4745475 6 0.560024 0.623358 -0.06181867 11 0.513225 0.646805 -1.3358e-01 0.98059286 0.00818948 weaklyHypometh 1.00000 0.454971 insignificant 0.99929596 0.00018854 weaklyHypometh 1.00000 0.063402 weaklyHypometh -0.07728965 0.07444002 insignificant 1.00000 insignificant 0.560197 0.0368364 0.5293769 13 0.543648 0.0517940 0.4918541 4.2492e-61 1.0000e+00 hypermethylated 1.0623e-58 1.0000e+00 hypermethylated 3.3995e-25 1.0000e+00 hypermethylated 1.6997e-22 1.0000e+00 hypermethylated 0.4962711 1.0008e-11 hypermethylated 1.4296e-09 hypermethylated 0.560197 0.522484 0.01524977 9 0.543648 0.563397 -0.0197489 7.4700e-01 3.0645e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.6633e-01 5.8142e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0229326 6.3548e-01 insignificant 1.0000e+00 insignificant 0.623358 0.0368564 0.58529221 11 0.646805 0.0552470 5.9156e-01 5.8707e-55 1.0000e+00 hypermethylated 1.4677e-52 1.0000e+00 hypermethylated 2.9508e-22 1.0000e+00 hypermethylated 1.4754e-19 1.0000e+00 hypermethylated 0.5735608 7.0890e-11 hypermethylated 1.7722e-08 hypermethylated 0.624425 0.522825 0.07729773 9 0.688358 0.589080 0.09927800 1.9287e-01 8.9811e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.7732e-02 9.9665e-01 weaklyHypermeth 5.9005e-01 1.0000e+00 insignificant 0.0543571 2.8616e-01 insignificant 1.00000000 insignificant 0.0368364 0.522484 -0.5083159 9 0.0517940 0.563397 -0.51160295 1.0000e+00 2.1685e-41 hypomethylated 1.0000e+00 1.0843e-38 hypomethylated 1.0000e+00 1.1285e-13 hypomethylated 1.0000e+00 5.6424e-11 hypomethylated -0.5192037 9.0934e-06 hypomethylated 0.00194956 hypomethylated chr1 21838531 21839531 475 RAP1GAP ENSG00000076864 0.703445 230 10 0.4260944 261 13 0.476053 252 11 0.631634 229 9 0.636059 200 13 0.724318 413 12 0.7001194 238 13 0.398506 316 11 0.4537474 222 13 0.737180 193 11 0.708512 516 13 0.543955 180 10 0.384364 315 13 0.5666667 60 6 0.5305297 285 13 0.454124 134 13 0.2986556 151 6 0.520881 302 9 0.567579 346 13 0.557240 232 12 0.756313 176 11 0.4952076 89 3 0.720757 235 11 0.728512 157 14 0.583849 69 6 0.6704918 331 11 0.650096 232 12 0.674725 53 7 0.566942 298 12 0.4813820 377 13 0.4691097 444 11 0.741888 364 13 0.0366964 380 13 0.0117919 361 13 0.1470588 302 9 0.000000 111 3 0.0891456 216 11 0.0435789 476 12 0.501236 270 11 0.7166044 333 12 0.5465399 194 6 0.5673552 331 10 0.5378425 276 9 0.7340843 0.3571178 0.453943 0.603973 0.581226 0.722636 0.762476 0.4170442 0.4131252 0.647512 0.671160 0.4698569 0.310997 0.5367203 0.4496479 0.4291734 0.3098019 0.5170312 0.4939169 0.5832543 0.823433 0.5347230 0.759077 0.5721416 0.5796041 0.6301543 0.7413962 0.6810390 0.5252503 0.444742 0.4277698 0.7791263 0.0305299 0.0158730 0.05658056 0.0084968 0.0633679 0.0292452 0.5369402 0.5643680 0.4466473 0.5013458 0.4745475 6 0.560024 0.623358 -0.06181867 11 0.513225 0.646805 -1.3358e-01 0.98059286 0.00818948 weaklyHypometh 1.00000 0.454971 insignificant 0.99929596 0.00018854 weaklyHypometh 1.00000 0.063402 weaklyHypometh -0.07728965 0.07444002 insignificant 1.00000 insignificant 0.560197 0.0368364 0.5293769 13 0.543648 0.0517940 0.4918541 4.2492e-61 1.0000e+00 hypermethylated 1.0623e-58 1.0000e+00 hypermethylated 3.3995e-25 1.0000e+00 hypermethylated 1.6997e-22 1.0000e+00 hypermethylated 0.4962711 1.0008e-11 hypermethylated 1.4296e-09 hypermethylated 0.560197 0.522484 0.01524977 9 0.543648 0.563397 -0.0197489 7.4700e-01 3.0645e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.6633e-01 5.8142e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0229326 6.3548e-01 insignificant 1.0000e+00 insignificant 0.623358 0.0368564 0.58529221 11 0.646805 0.0552470 5.9156e-01 5.8707e-55 1.0000e+00 hypermethylated 1.4677e-52 1.0000e+00 hypermethylated 2.9508e-22 1.0000e+00 hypermethylated 1.4754e-19 1.0000e+00 hypermethylated 0.5735608 7.0890e-11 hypermethylated 1.7722e-08 hypermethylated 0.624425 0.522825 0.07729773 9 0.688358 0.589080 0.09927800 1.9287e-01 8.9811e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.7732e-02 9.9665e-01 weaklyHypermeth 5.9005e-01 1.0000e+00 insignificant 0.0543571 2.8616e-01 insignificant 1.00000000 insignificant 0.0368364 0.522484 -0.5083159 9 0.0517940 0.563397 -0.51160295 1.0000e+00 2.1685e-41 hypomethylated 1.0000e+00 1.0843e-38 hypomethylated 1.0000e+00 1.1285e-13 hypomethylated 1.0000e+00 5.6424e-11 hypomethylated -0.5192037 9.0934e-06 hypomethylated 0.00194956 hypomethylated chr1 22103231 22104231 486 HSPG2 ENSG00000142798 0.927790 260 8 0.8705486 224 9 0.829546 232 8 0.809938 234 7 0.715476 136 8 0.935946 456 9 0.7277565 198 9 0.886812 225 9 0.8510296 172 9 0.908015 214 8 0.890845 329 9 0.924428 111 7 0.866564 269 8 0.9758852 113 5 0.9303114 240 8 0.744444 61 5 0.7888889 21 3 0.851972 285 7 0.958126 380 7 0.931384 297 9 0.829936 125 7 0.9365991 139 8 0.902926 216 8 0.766137 167 9 0.934259 91 5 0.8501517 312 9 0.944174 215 8 0.876936 163 8 0.814510 340 8 0.9203940 323 8 0.8826964 286 8 0.871637 376 9 0.7367899 233 8 0.6413255 187 8 0.9166667 101 6 0.717593 31 2 0.5620536 243 9 0.8214221 356 9 0.931411 249 7 0.9528700 317 8 0.9093673 190 7 0.9276714 296 7 0.8560298 267 7 0.9201973 0.8701014 0.823874 0.907113 0.906682 0.936387 0.852320 0.9121366 0.9023851 0.935109 0.923904 0.9279686 0.911612 0.9495065 0.9244799 0.9111111 0.9169274 0.8577411 0.9223956 0.9303606 0.851682 0.9437948 0.920574 0.9668731 0.9455625 0.9165878 0.9196493 0.8942145 0.9389082 0.947424 0.9202657 0.8930397 0.7925753 0.5108772 0.97236272 0.7026042 0.5758743 0.8357083 0.9490836 0.9196718 0.9050238 0.8769756 0.8994042 5 0.903523 0.919214 -0.01679618 8 0.834142 0.870935 -3.6793e-02 0.99892467 0.06825271 insignificant 1.00000 1.000000 insignificant 0.99599220 0.04978845 weaklyHypometh 1.00000 0.987478 insignificant -0.01124430 0.63324612 insignificant 1.00000 insignificant 0.904110 0.7341442 0.1710411 8 0.892557 0.6587301 0.2338266 6.0614e-15 8.2461e-01 weaklyHypermeth 1.2897e-13 1.0000e+00 weaklyHypermeth 6.4064e-04 8.1888e-01 weaklyHypermeth 8.3201e-03 1.0000e+00 weaklyHypermeth 0.1336436 4.7862e-02 weaklyHypermeth 4.5152e-01 insignificant 0.904045 0.919636 -0.00532070 7 0.880618 0.888654 -0.0080354 9.3177e-01 9.8416e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 8.6636e-01 2.2825e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0491845 5.6867e-02 insignificant 6.5364e-01 insignificant 0.920774 0.7341442 0.18695367 9 0.913585 0.6587301 2.5485e-01 5.4849e-13 9.6355e-01 weaklyHypermeth 1.2756e-11 1.0000e+00 weaklyHypermeth 3.7984e-04 8.5858e-01 weaklyHypermeth 5.5050e-03 1.0000e+00 weaklyHypermeth 0.1448879 3.6186e-02 weaklyHypermeth 3.2023e-01 insignificant 0.920658 0.919636 0.00810860 7 0.903983 0.888654 0.01532902 2.5008e-01 3.7154e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.9462e-01 7.4165e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0379402 1.2325e-01 insignificant 1.00000000 insignificant 0.7354221 0.919636 -0.1773088 7 0.7319223 0.888654 -0.15673157 8.9963e-01 8.9775e-07 weaklyHypometh 1.0000e+00 2.1375e-05 weaklyHypometh 8.9093e-01 7.2640e-03 weaklyHypometh 1.0000e+00 8.9678e-02 weaklyHypometh -0.1828281 1.4798e-02 weaklyHypometh 0.17971520 insignificant chr1 22131931 22132931 491 ENSG00000220169 0.714813 153 8 0.6653501 388 10 0.664129 299 9 0.685458 108 6 0.743188 204 9 0.824891 242 10 0.5900713 320 9 0.670862 233 10 0.6856176 225 7 0.785362 245 10 0.757404 459 10 0.626112 219 7 0.714374 289 9 0.8728865 55 2 0.7248790 264 10 0.553568 214 8 0.6628573 170 7 0.762511 139 7 0.690310 222 9 0.679926 213 8 0.822554 182 10 0.6350000 68 4 0.740827 273 10 0.719762 153 9 0.809096 192 6 0.7740001 360 10 0.672880 216 10 0.743392 130 7 0.786244 246 10 0.7684988 394 10 0.7355737 385 10 0.856347 236 8 0.6448531 332 10 0.4936862 292 10 0.7403868 249 8 0.642321 157 7 0.6868443 207 9 0.7847867 321 10 0.717684 155 6 0.5472045 158 8 0.6729548 91 6 0.7029065 109 7 0.6921719 123 8 0.7552552 0.7190426 0.722279 0.711623 0.796033 0.819790 0.647045 0.7070793 0.6662861 0.756529 0.791859 0.6778693 0.713555 0.7503393 0.7102940 0.6102935 0.6566187 0.6383303 0.7574894 0.7071429 0.851341 0.5154341 0.784997 0.7791576 0.7706772 0.7608015 0.7351737 0.7216667 0.7690383 0.789772 0.7622599 0.8741987 0.5593950 0.3802895 0.66880196 0.5608439 0.6497768 0.7211753 0.7161817 0.5468250 0.6533073 0.5836420 0.7137413 4 0.691912 0.755908 -0.05199190 10 0.695765 0.756179 -6.0414e-02 0.99998755 0.00011613 weaklyHypometh 1.00000 0.041293 weaklyHypometh 0.99997710 0.00154094 weaklyHypometh 1.00000 0.171216 insignificant -0.05161932 0.04510512 weaklyHypometh 1.00000 insignificant 0.691912 0.6681643 0.0757345 10 0.695765 0.6550340 0.0407312 3.8121e-08 6.1519e-02 weaklyHypermeth 5.0159e-07 1.0000e+00 weaklyHypermeth 2.2174e-03 2.1203e-01 weaklyHypermeth 2.5198e-02 1.0000e+00 weaklyHypermeth 0.0382489 4.1888e-01 insignificant 1.0000e+00 insignificant 0.691912 0.646226 0.08333165 7 0.695765 0.619719 0.0760465 2.5978e-05 9.0835e-01 weaklyHypermeth 1.1696e-03 1.0000e+00 weaklyHypermeth 5.8360e-03 7.8834e-01 weaklyHypermeth 2.2446e-01 1.0000e+00 insignificant 0.0371443 3.2591e-01 insignificant 1.0000e+00 insignificant 0.755908 0.6681643 0.11575114 10 0.756179 0.6550340 1.0114e-01 7.4120e-08 6.9624e-01 weaklyHypermeth 1.0589e-06 1.0000e+00 weaklyHypermeth 3.3741e-04 6.8790e-01 weaklyHypermeth 5.0360e-03 1.0000e+00 weaklyHypermeth 0.0898683 8.5494e-02 insignificant 6.1336e-01 insignificant 0.755908 0.646226 0.13568933 7 0.756179 0.619719 0.13646014 2.2217e-07 9.9998e-01 weaklyHypermeth 1.7090e-05 1.0000e+00 weaklyHypermeth 3.1375e-04 9.5539e-01 weaklyHypermeth 2.6146e-02 1.0000e+00 weaklyHypermeth 0.0887636 4.1753e-02 weaklyHypermeth 0.67343347 insignificant 0.6681643 0.646226 0.0229335 7 0.6550340 0.619719 0.03531535 9.6158e-02 3.8648e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.1864e-01 2.7617e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0011046 9.8332e-01 insignificant 1.00000000 insignificant chr1 22259431 22260431 499 CDC42 ENSG00000070831 0.825000 96 5 0.7589474 85 5 0.740873 40 5 0.810417 68 4 0.588141 44 4 0.798718 80 5 0.8333333 40 4 0.746671 75 5 0.7555556 43 5 0.779048 34 5 0.592512 130 5 0.791667 17 0 0.821569 53 5 0.5619048 45 5 0.9538462 38 5 0.670000 18 2 NA 0 0 0.428241 92 4 0.653081 68 5 0.869097 49 5 0.833333 21 1 1.0000000 1 0 0.828205 36 3 0.739762 31 4 0.809748 65 4 0.7738889 100 5 0.705859 60 5 0.580000 15 2 0.812729 83 5 0.8111129 96 5 0.8319770 79 5 0.683333 42 4 0.5794872 82 5 0.7200000 47 5 0.7286503 103 5 0.550000 12 0 0.4896359 62 5 0.6717281 86 5 0.771111 53 5 0.6886869 63 5 0.8097368 90 4 0.8909091 48 2 0.8028571 63 5 0.8020833 0.7341455 0.798225 0.780261 0.680199 0.779215 0.810185 0.7082346 0.9097222 0.816005 0.734302 0.7245370 0.799700 0.7907407 0.9679487 0.7097222 NA 0.6936728 0.8244108 0.8239969 0.662037 NA 0.774929 0.7237930 0.7732132 0.7347608 0.6853956 0.6166667 0.7322955 0.805920 0.7656949 0.6527778 0.5904558 0.7444444 0.62798750 0.4965278 0.5911385 0.6710361 0.7578704 0.6904461 0.8071063 0.8409091 0.7867063 0 0.770404 0.751987 0.02106739 5 0.654439 0.851679 -1.9724e-01 0.42924669 0.08667815 insignificant 1.00000 1.000000 insignificant 0.24606625 0.13719954 insignificant 1.00000 1.000000 insignificant -0.04844547 0.25102353 lowCoverage 1.00000 lowCoverage 0.770404 0.6071429 0.1716554 5 0.654439 0.6593750 -0.0049356 2.3568e-09 7.6028e-01 weaklyHypermeth 3.4659e-08 1.0000e+00 weaklyHypermeth 7.0936e-04 7.1739e-01 weaklyHypermeth 8.9793e-03 1.0000e+00 weaklyHypermeth 0.1124666 4.3928e-02 lowCoverage 4.1944e-01 lowCoverage 0.777982 0.766562 0.01274693 4 0.783214 0.776779 0.0064351 3.9671e-01 3.7410e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 2.5885e-01 4.5884e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0569433 2.1735e-01 lowCoverage 1.0000e+00 lowCoverage 0.751987 0.6071429 0.14631956 5 0.851679 0.6593750 1.9230e-01 5.0896e-07 9.9997e-01 weaklyHypermeth 6.6098e-06 1.0000e+00 weaklyHypermeth 1.2719e-02 9.9909e-01 weaklyHypermeth 9.9365e-02 1.0000e+00 weaklyHypermeth 0.1609121 8.3698e-03 lowCoverage 1.0593e-01 lowCoverage 0.747981 0.766562 -0.02356810 4 0.762687 0.776779 -0.01409200 3.7934e-01 1.0002e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.0744e-01 1.9233e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0084979 8.5068e-01 lowCoverage 1.00000000 lowCoverage 0.6051948 0.766562 -0.1569746 4 0.5883333 0.776779 -0.18844578 9.9996e-01 3.3557e-05 lowCoverage 1.0000e+00 5.2973e-04 lowCoverage 9.9949e-01 6.8946e-04 lowCoverage 1.0000e+00 1.3789e-02 lowCoverage -0.1694100 9.6026e-03 lowCoverage 0.14121509 lowCoverage chr1 22484431 22485431 503 WNT4 ENSG00000162552 0.924039 728 18 0.8391288 672 13 0.888081 518 13 0.903903 684 16 0.845292 344 11 0.812639 817 14 0.8608268 549 13 0.940889 534 14 0.7534488 397 12 0.860684 379 13 0.924823 629 19 0.880491 249 12 0.782733 471 13 0.8496118 264 8 0.9368069 535 13 0.910451 129 11 0.7304654 76 7 0.906798 718 17 0.933720 725 16 0.755639 767 13 0.768719 207 13 0.8746720 228 13 0.875991 505 17 0.841201 208 13 0.895335 221 13 0.9723742 903 18 0.726799 481 13 0.538380 288 13 0.869309 709 18 0.8528765 890 18 0.8654095 834 18 0.931018 668 18 0.8747521 596 17 0.7896942 586 18 0.9634226 590 12 0.736535 198 11 0.5306659 373 15 0.6229018 843 14 0.917199 739 17 0.9560245 684 14 0.8120706 529 15 0.8897512 936 15 0.9230209 624 16 0.9247207 0.8910117 0.884692 0.880925 0.849786 0.911500 0.868418 0.9039218 0.8987055 0.885029 0.891899 0.8421441 0.928473 0.8798084 0.9176613 0.9264305 0.8238123 0.8932247 0.9151330 0.9147511 0.850383 0.8806503 0.913522 0.8885425 0.9408558 0.9310864 0.8613248 0.8936306 0.8754843 0.939882 0.9278307 0.9138996 0.8471058 0.7566797 0.93094168 0.7782737 0.8727957 0.8091744 0.8944075 0.9289671 0.8940818 0.8582187 0.9147358 7 0.908689 0.910898 -0.00283742 13 0.686859 0.714209 -2.7350e-02 0.97870299 0.73746452 insignificant 1.00000 1.000000 insignificant 0.99867092 0.71025625 insignificant 1.00000 1.000000 insignificant 0.02768304 0.45206404 insignificant 1.00000 insignificant 0.908939 0.8513981 0.0586984 13 0.718064 0.6019701 0.1160936 5.1582e-07 9.7290e-01 weaklyHypermeth 6.0685e-06 1.0000e+00 weaklyHypermeth 7.2474e-03 9.6969e-01 weaklyHypermeth 7.3206e-02 1.0000e+00 weaklyHypermeth 0.1090283 1.5765e-01 insignificant 1.0000e+00 insignificant 0.909828 0.917711 0.00481065 10 0.879547 0.883650 -0.0041033 4.7987e-01 3.9854e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.3278e-01 2.6809e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0375897 2.2561e-01 insignificant 1.0000e+00 insignificant 0.911194 0.8505964 0.06147685 16 0.714209 0.5618388 1.5237e-01 3.8475e-04 9.9980e-01 weaklyHypermeth 3.1280e-03 1.0000e+00 weaklyHypermeth 2.3273e-02 9.9969e-01 weaklyHypermeth 1.6162e-01 1.0000e+00 insignificant 0.0813452 2.9813e-01 insignificant 1.0000e+00 insignificant 0.913300 0.917711 0.00731011 12 0.912958 0.883650 0.02930797 4.2937e-01 8.1088e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.1331e-01 7.0405e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0652728 1.3104e-01 insignificant 1.00000000 insignificant 0.8544764 0.917711 -0.0558277 14 0.8081665 0.883650 -0.07548334 8.2973e-01 2.0632e-02 weaklyHypometh 1.0000e+00 1.2976e-01 insignificant 9.8733e-01 3.5193e-02 weaklyHypometh 1.0000e+00 2.9328e-01 insignificant -0.1466180 7.6863e-02 insignificant 0.55330936 insignificant chr1 23321531 23322531 521 LUZP1 ENSG00000169641 0.593603 75 5 0.4255952 86 5 0.709184 28 4 0.853333 59 5 0.712500 31 5 0.721875 68 5 0.6238095 39 3 0.812049 52 5 0.6333333 22 2 0.550000 23 1 0.704085 142 5 0.933333 10 0 0.821429 49 3 0.6361111 41 5 0.7322727 45 5 0.766667 15 0 0.9000000 8 0 0.641667 45 3 0.726974 59 5 0.717778 53 5 0.649351 38 5 0.8750000 7 0 0.734848 20 1 0.695238 40 5 0.900000 34 1 0.8137800 98 5 0.725000 47 5 0.640000 22 2 0.492593 65 6 0.6368056 78 5 0.6893162 55 5 0.783189 61 5 0.5835129 90 5 0.4928571 36 4 0.7159664 76 5 0.666667 10 0 0.4804749 67 5 0.5616667 67 5 0.556136 82 4 0.5761634 57 5 0.7074786 48 4 0.6484848 34 1 0.7500000 69 5 0.6291093 0.5422078 0.588420 0.866793 0.578283 0.731061 0.609848 0.7586471 0.6666667 0.628788 0.746361 0.9242424 0.768939 0.6010101 0.7469008 0.7853535 0.9166667 0.7427609 0.7387859 0.7329966 0.714876 0.8053049 0.661846 0.6778499 0.8901515 0.7565528 0.7924242 0.6477273 0.6397306 0.782197 0.6934570 0.8251837 0.5604101 0.5459957 0.57855021 0.6969697 0.5919431 0.5883838 0.6168609 0.7065624 0.6689005 0.6643710 0.7686869 0 0.725263 0.725664 -0.02159084 5 0.682503 0.637599 4.4905e-02 0.79712969 0.73522700 insignificant 1.00000 1.000000 insignificant 0.82343579 0.72189117 insignificant 1.00000 1.000000 insignificant -0.00881354 0.83704015 lowCoverage 1.00000 lowCoverage 0.725263 0.5838150 0.1298710 5 0.682503 0.5478712 0.1346321 5.4768e-06 9.9486e-01 weaklyHypermeth 5.8264e-05 1.0000e+00 weaklyHypermeth 6.9733e-03 9.9830e-01 weaklyHypermeth 7.1156e-02 1.0000e+00 weaklyHypermeth 0.1272557 2.0601e-02 lowCoverage 2.3147e-01 lowCoverage 0.725134 0.737931 0.02886884 4 0.676150 0.662271 0.0138781 3.5030e-01 9.3093e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 2.3768e-01 9.3844e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0631274 2.0283e-01 lowCoverage 1.0000e+00 lowCoverage 0.725664 0.5838150 0.15056272 5 0.637599 0.5478712 8.9727e-02 1.9257e-05 9.9435e-01 weaklyHypermeth 1.9853e-04 1.0000e+00 weaklyHypermeth 2.2444e-03 9.9929e-01 weaklyHypermeth 2.3625e-02 1.0000e+00 weaklyHypermeth 0.1360693 1.9000e-02 lowCoverage 1.9588e-01 lowCoverage 0.726786 0.737931 0.05392468 4 0.642298 0.662271 -0.01997304 2.3434e-01 9.4802e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 3.4560e-01 9.6722e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0719409 1.7538e-01 lowCoverage 1.00000000 lowCoverage 0.5860058 0.737931 -0.0977128 4 0.5746884 0.662271 -0.08758302 9.7500e-01 5.7621e-02 lowCoverage 1.0000e+00 3.1146e-01 lowCoverage 9.9704e-01 1.8090e-01 lowCoverage 1.0000e+00 9.8315e-01 lowCoverage -0.0641284 2.5944e-01 lowCoverage 1.00000000 lowCoverage chr1 23376231 23377231 524 LUZP1 ENSG00000169641 0.017593 379 27 0.0130454 570 27 0.025329 592 28 0.008549 240 14 0.011411 373 21 0.073706 545 30 0.0238299 838 30 0.018074 520 30 0.0062648 504 30 0.015625 471 30 0.025312 870 30 0.019793 619 27 0.022398 696 28 NA 0 0 0.0116239 691 30 0.044239 580 27 0.0124067 409 30 0.017261 292 20 0.011271 630 27 0.032904 472 30 0.031425 263 22 0.0227273 237 15 0.031805 508 30 0.029762 282 23 0.052778 183 14 0.0070085 787 30 0.018755 316 28 0.027175 229 22 0.040687 381 26 0.0095985 836 30 0.0087156 762 30 0.028091 758 30 0.0116162 363 25 0.0031339 465 27 0.0016978 492 16 0.019048 202 11 0.0401776 151 14 0.0087963 569 30 0.018875 462 25 0.0078092 515 26 0.0012255 297 14 0.0047619 375 23 0.0099256 315 14 0.0171213 0.0087764 0.023179 0.009857 0.012453 0.078210 0.029386 0.0226793 0.0069380 0.015342 0.018767 0.0202861 0.019389 NA 0.0127353 0.0391069 0.0228597 0.0090405 0.0080956 0.0258466 0.028407 0.0137486 0.041804 0.0246255 0.0328967 0.0060594 0.0217658 0.0234081 0.0433595 0.010930 0.0084811 0.0305327 0.0076339 0.0064048 0.01084990 0.0173548 0.0507246 0.0099460 0.0111972 0.0068328 0.0027659 0.0029229 0.0137428 1 0.020698 0.019488 0.00139544 30 0.021453 0.020873 5.8042e-04 0.06844673 0.86952878 insignificant 1.00000 1.000000 insignificant 0.05740915 0.79416356 insignificant 1.00000 1.000000 insignificant -0.00409822 0.44493974 insignificant 1.00000 insignificant 0.020698 0.0120428 0.0075993 27 0.021453 0.0140161 0.0074370 4.5697e-03 9.8960e-01 weaklyHypermeth 2.8383e-02 1.0000e+00 weaklyHypermeth 3.3275e-03 9.9959e-01 weaklyHypermeth 3.5779e-02 1.0000e+00 weaklyHypermeth 0.0075341 2.9742e-01 insignificant 1.0000e+00 insignificant 0.020698 0.010183 0.01665608 20 0.021453 0.013058 0.0083948 3.0512e-02 8.8445e-01 weaklyHypermeth 5.4486e-01 1.0000e+00 insignificant 1.8791e-02 9.9837e-01 weaklyHypermeth 5.0786e-01 1.0000e+00 insignificant 0.0130930 1.2183e-02 weaklyHypermeth 2.6757e-01 insignificant 0.019488 0.0120428 0.00551827 27 0.020873 0.0140161 6.8566e-03 3.5229e-01 9.9919e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.8931e-01 9.9999e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0116324 1.2859e-01 insignificant 8.2210e-01 insignificant 0.019488 0.010183 0.01107005 20 0.020873 0.013058 0.00781434 3.4887e-01 6.9611e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.1681e-01 9.6212e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0171912 3.4144e-03 weaklyHypermeth 0.15823880 insignificant 0.0120428 0.010183 -0.0014697 17 0.0140161 0.013058 0.00095775 9.9982e-01 8.6875e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9976e-01 9.7722e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0055589 4.2140e-01 insignificant 1.00000000 insignificant chr1 23576331 23577331 527 ENSG00000201405 0.782197 133 5 0.8250930 147 6 0.662857 91 7 0.665293 100 5 0.621769 47 2 0.628221 174 6 0.4562778 97 6 0.626948 126 6 0.7149767 94 8 0.662963 71 6 0.705621 211 8 0.703777 48 2 0.669223 120 7 0.6350000 53 5 0.5658009 110 7 0.416667 49 1 0.5536398 47 2 0.613568 143 6 0.680580 114 6 0.722059 144 6 0.719551 32 2 0.8000000 9 1 0.718079 104 6 0.569243 70 6 0.930556 29 2 0.5312623 178 6 0.738946 58 6 0.848639 31 3 0.625817 114 6 0.6110813 170 6 0.6214055 154 6 0.571346 127 5 0.4886548 160 7 0.7200000 69 5 0.4511667 116 5 0.646825 19 2 0.4137865 90 6 0.6911006 147 6 0.495970 104 5 0.8786822 86 5 0.5519854 100 6 0.4610644 77 5 0.7651172 116 5 0.8329951 0.8017867 0.721301 0.853317 0.646173 0.766654 0.734855 0.7340561 0.7321429 0.802976 0.770700 0.7313218 0.844689 0.7946429 0.7750000 0.6607143 0.6315681 0.8316747 0.8276467 0.7923826 0.830357 0.7321429 0.773759 0.7640399 0.8556548 0.8369567 0.7388393 0.8042687 0.7832090 0.881738 0.8351572 0.8983480 0.5386407 0.7614286 0.52276786 0.7568027 0.5926185 0.7501175 0.7663462 0.8444767 0.8605314 0.7675070 0.8421202 2 0.763645 0.790892 -0.04340511 6 0.606572 0.627023 -2.0451e-02 0.98766765 0.09779464 insignificant 1.00000 1.000000 insignificant 0.99845974 0.02131744 weaklyHypometh 1.00000 0.716057 insignificant -0.04486736 0.29535190 lowCoverage 1.00000 lowCoverage 0.765877 0.6422629 0.1105522 6 0.710184 0.4579559 0.2522277 2.2743e-04 9.9964e-01 weaklyHypermeth 1.8490e-03 1.0000e+00 weaklyHypermeth 9.8269e-02 9.9989e-01 insignificant 5.3994e-01 1.0000e+00 insignificant 0.0770375 2.3030e-01 insignificant 1.0000e+00 insignificant 0.763645 0.809524 -0.03376449 5 0.606572 0.688408 -0.0818363 1.6896e-01 3.5131e-02 weaklyHypometh 1.0000e+00 5.4892e-01 insignificant 5.7562e-01 1.8873e-02 weaklyHypometh 1.0000e+00 3.8517e-01 insignificant 0.0150628 8.6576e-01 insignificant 1.0000e+00 insignificant 0.795327 0.6442953 0.15311023 6 0.696692 0.4948252 2.0187e-01 6.2613e-06 9.9999e-01 weaklyHypermeth 6.8805e-05 1.0000e+00 weaklyHypermeth 8.9090e-04 9.9999e-01 weaklyHypermeth 1.1126e-02 1.0000e+00 weaklyHypermeth 0.1219049 9.1490e-02 lowCoverage 6.4430e-01 lowCoverage 0.790892 0.809524 0.02027187 5 0.627023 0.688408 -0.06138529 5.8168e-02 1.7735e-01 insignificant 7.8258e-01 1.0000e+00 insignificant 2.5493e-01 3.5162e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0599301 5.2714e-01 lowCoverage 1.00000000 lowCoverage 0.6442953 0.812500 -0.1349596 5 0.4948252 0.727861 -0.23303595 5.6642e-01 1.5319e-02 weaklyHypometh 1.0000e+00 1.0307e-01 insignificant 8.4697e-01 2.3740e-02 weaklyHypometh 1.0000e+00 2.1981e-01 insignificant -0.0619748 5.4607e-01 insignificant 1.00000000 insignificant chr1 23602531 23603531 529 ENSG00000201405 0.075030 338 8 0.0834310 436 8 0.060952 455 8 0.064553 284 8 0.048523 228 8 0.116359 597 8 0.0623786 406 8 0.047727 411 8 0.0492862 511 8 0.064279 386 8 0.077979 404 8 0.075161 332 8 0.012712 447 8 0.0765508 183 4 0.0434985 522 8 0.073446 407 8 0.0079248 319 6 0.077266 302 8 0.036362 259 8 0.057224 475 8 0.044118 131 7 0.0397465 211 8 0.108901 284 8 0.100953 283 8 0.027473 104 8 0.0407124 507 8 0.045539 233 8 0.049513 128 7 0.085378 208 8 0.0197882 592 8 0.0492094 485 8 0.093012 510 8 0.0108696 389 8 0.0062500 178 8 0.0219780 435 7 0.020833 75 4 0.0223214 282 8 0.0595039 329 8 0.057320 332 8 0.0377741 296 8 0.0494281 239 8 0.0317907 220 8 0.0179257 277 8 0.0826367 0.0787121 0.068029 0.060562 0.053732 0.125578 0.060313 0.0491913 0.0478020 0.063228 0.081228 0.0747284 0.010078 0.0499726 0.0448939 0.0846395 0.0110431 0.0743377 0.0320249 0.0666660 0.046635 0.0323388 0.110916 0.1312171 0.0244365 0.0408594 0.0430358 0.0460103 0.0911932 0.016816 0.0429952 0.1036358 0.0058754 0.0062312 0.02184961 0.0200200 0.0161739 0.0475442 0.0471173 0.0305226 0.0384797 0.0284374 0.0209056 8 0.065974 0.056855 0.00810574 8 0.062502 0.055645 6.8567e-03 0.34817320 0.40411636 insignificant 1.00000 1.000000 insignificant 0.50897080 0.73662136 insignificant 1.00000 1.000000 insignificant 0.00183681 0.85983769 insignificant 1.00000 insignificant 0.065974 0.0242891 0.0421987 8 0.062502 0.0224057 0.0400958 1.6297e-06 5.5539e-01 weaklyHypermeth 1.8519e-05 1.0000e+00 weaklyHypermeth 3.7932e-07 9.9461e-01 weaklyHypermeth 1.0838e-05 1.0000e+00 weaklyHypermeth 0.0369061 2.5503e-03 weaklyHypermeth 4.4742e-02 weaklyHypermeth 0.065974 0.026393 0.03521486 8 0.062502 0.039950 0.0225513 5.8827e-04 7.6074e-01 weaklyHypermeth 1.8976e-02 1.0000e+00 weaklyHypermeth 1.3775e-03 8.9708e-01 weaklyHypermeth 8.6094e-02 1.0000e+00 weaklyHypermeth 0.0216843 3.3497e-02 weaklyHypermeth 5.0753e-01 insignificant 0.056855 0.0242891 0.03631626 8 0.055645 0.0224057 3.3239e-02 6.5228e-05 8.4696e-01 weaklyHypermeth 5.8764e-04 1.0000e+00 weaklyHypermeth 2.1667e-05 9.9581e-01 weaklyHypermeth 4.4218e-04 1.0000e+00 weaklyHypermeth 0.0350692 8.5054e-03 weaklyHypermeth 1.0593e-01 insignificant 0.056855 0.026393 0.02463129 8 0.055645 0.039950 0.01569454 3.0147e-02 8.6196e-01 weaklyHypermeth 4.9421e-01 1.0000e+00 insignificant 9.7932e-03 9.4732e-01 weaklyHypermeth 2.6575e-01 1.0000e+00 insignificant 0.0198475 9.4316e-02 insignificant 1.00000000 insignificant 0.0242891 0.026393 -0.0102616 8 0.0224057 0.039950 -0.01754450 6.7697e-01 1.5559e-02 weaklyHypometh 1.0000e+00 1.0373e-01 insignificant 8.3577e-01 1.8205e-02 weaklyHypometh 1.0000e+00 1.7790e-01 insignificant -0.0152217 1.7322e-01 insignificant 0.98660869 insignificant chr1 23789831 23790831 541 ID3 ENSG00000117318 0.793389 359 9 0.7631810 258 9 0.710766 126 9 0.699001 297 9 0.575412 88 6 0.742946 483 9 0.5626855 109 9 0.791805 233 9 0.8090521 132 9 0.778589 131 9 0.668082 358 10 0.544239 53 2 0.808897 245 9 0.7187802 65 8 0.7274618 145 6 0.792857 29 2 0.6350039 47 2 0.743660 376 9 0.822298 231 6 0.761252 370 9 0.724281 117 7 0.6242230 129 9 0.721568 113 3 0.781638 83 6 0.731287 125 8 0.7630818 378 9 0.624493 144 6 0.594628 58 3 0.819783 228 9 0.8829865 414 9 0.8753784 380 9 0.764008 508 9 0.7997003 281 9 0.8417532 202 6 0.4793854 116 5 0.811458 35 2 0.8454823 124 9 0.8019905 368 9 0.889809 197 6 0.7002395 278 9 0.8116564 273 6 0.8310625 185 6 0.7568962 268 6 0.8339914 0.7476196 0.712024 0.841487 0.797794 0.838255 0.661384 0.8495928 0.7847309 0.846935 0.839008 0.5881604 0.841510 0.7257677 0.7845631 0.7647817 0.7369364 0.7949511 0.7698943 0.8219216 0.825401 0.8431172 0.771213 0.8677448 0.8065179 0.7908263 0.7756785 0.6785150 0.8326754 0.862616 0.8104944 0.8598608 0.8013977 0.7923924 0.59961629 0.7686086 0.7083659 0.7780765 0.8653780 0.8681471 0.8117107 0.8337422 0.8551133 3 0.799758 0.819574 -0.01643762 9 0.737009 0.727138 9.8709e-03 0.38955679 0.00316710 weaklyHypometh 1.00000 0.395888 insignificant 0.91754691 0.00822567 weaklyHypometh 1.00000 0.514104 insignificant -0.01981171 0.55503014 insignificant 1.00000 insignificant 0.799515 0.8257778 -0.0221125 9 0.725367 0.7656275 -0.0402603 2.7174e-03 1.6482e-03 weaklyHypometh 1.7952e-02 1.0302e-01 weaklyHypometh 2.6244e-01 1.3407e-03 weaklyHypometh 1.0000e+00 1.1172e-01 insignificant -0.0408271 5.2379e-01 insignificant 1.0000e+00 insignificant 0.799758 0.833472 -0.03278677 6 0.737009 0.791062 -0.0540526 9.6783e-01 2.2764e-02 weaklyHypometh 1.0000e+00 4.0551e-01 insignificant 9.9835e-01 1.8116e-03 weaklyHypometh 1.0000e+00 1.0137e-01 insignificant -0.0754649 8.3972e-02 insignificant 7.9982e-01 insignificant 0.820187 0.8257778 -0.00451807 9 0.779077 0.7656275 1.3449e-02 4.5359e-04 1.4209e-01 inconclusive 3.5999e-03 1.0000e+00 inconclusive 9.7137e-02 8.7293e-02 insignificant 5.4267e-01 1.0000e+00 insignificant -0.0210154 7.4959e-01 insignificant 1.0000e+00 insignificant 0.819574 0.833472 -0.02293121 6 0.727138 0.791062 -0.06392356 4.7069e-01 4.7124e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3586e-01 2.3595e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0556532 2.1697e-01 insignificant 1.00000000 insignificant 0.8257778 0.833333 -0.0315516 6 0.7656275 0.776138 -0.01051038 3.9616e-01 1.4914e-02 weaklyHypometh 1.0000e+00 1.0146e-01 insignificant 7.7355e-01 1.8681e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0346378 6.1367e-01 insignificant 1.00000000 insignificant chr1 24106631 24107631 550 ENSG00000218810 0.623597 103 5 0.5894489 84 5 0.603889 65 5 0.622017 108 5 0.654596 60 5 0.683614 249 5 0.6116394 107 5 0.539048 47 4 0.6616667 58 3 0.692292 56 5 0.761428 129 5 0.698485 60 5 0.740067 72 5 NA 0 0 0.6954817 69 5 0.630741 67 4 0.7109524 76 5 0.537463 84 5 0.676752 75 5 0.763007 213 5 0.763492 54 5 0.6484848 52 4 0.622533 79 5 0.712821 49 3 0.668571 36 5 0.6772158 107 5 0.535458 58 5 0.756140 46 4 0.653199 67 5 0.7376812 105 5 0.7294399 106 5 0.717842 271 5 0.5927894 95 5 0.4050000 63 5 0.5401739 140 5 0.471429 18 2 0.6850000 59 5 0.6249807 107 5 0.608571 79 5 0.6075000 93 5 0.6447447 102 5 0.6457143 94 5 0.5916667 80 5 0.6735139 0.6470373 0.650803 0.674324 0.709489 0.736842 0.673033 0.5913941 0.7233434 0.757433 0.804532 0.7502921 0.806538 NA 0.7576906 0.6758255 0.7664659 0.5935420 0.7377922 0.8131341 0.802304 0.7079226 0.684531 0.7459067 0.7125645 0.7294412 0.6047819 0.7952336 0.7368869 0.792998 0.7724221 0.7559065 0.6366262 0.4671687 0.63474070 0.4681992 0.7310241 0.6755977 0.6728055 0.6678966 0.7048645 0.7094091 0.6511816 4 0.702020 0.751456 -0.01657322 5 0.676936 0.698311 -2.1375e-02 0.82059485 0.01340290 weaklyHypometh 1.00000 0.492372 insignificant 0.80671043 0.00462071 weaklyHypometh 1.00000 0.359241 insignificant -0.02754593 0.26527911 lowCoverage 1.00000 lowCoverage 0.702020 0.6099585 0.1100386 5 0.676936 0.5659341 0.1110015 1.4126e-04 9.9150e-01 weaklyHypermeth 1.1871e-03 1.0000e+00 weaklyHypermeth 8.8690e-03 9.8375e-01 weaklyHypermeth 8.6951e-02 1.0000e+00 weaklyHypermeth 0.1044651 5.5482e-02 lowCoverage 4.9113e-01 lowCoverage 0.702020 0.691964 0.04512974 5 0.676936 0.623271 0.0536649 9.0982e-03 6.6359e-02 weaklyHypermeth 1.9779e-01 8.9321e-01 insignificant 3.3594e-02 3.6403e-02 weaklyHypermeth 7.6351e-01 5.8023e-01 insignificant 0.0380545 5.5256e-02 lowCoverage 6.5007e-01 lowCoverage 0.751456 0.6099585 0.11916871 5 0.698311 0.5659341 1.3238e-01 2.2469e-05 9.9996e-01 weaklyHypermeth 2.2469e-04 1.0000e+00 weaklyHypermeth 4.4238e-04 9.9999e-01 weaklyHypermeth 5.9781e-03 1.0000e+00 weaklyHypermeth 0.1320110 2.3750e-02 lowCoverage 2.3058e-01 lowCoverage 0.751456 0.691964 0.06387835 5 0.698311 0.623271 0.07503987 2.3200e-03 3.4882e-01 weaklyHypermeth 6.1054e-02 1.0000e+00 weaklyHypermeth 3.3562e-02 6.4226e-01 weaklyHypermeth 6.5808e-01 1.0000e+00 insignificant 0.0656004 8.6569e-03 lowCoverage 0.26232983 lowCoverage 0.6099585 0.691964 -0.0551568 5 0.5659341 0.623271 -0.05733664 2.9673e-01 2.3306e-02 weaklyHypometh 1.0000e+00 1.4476e-01 insignificant 4.5077e-01 1.8323e-02 weaklyHypometh 1.0000e+00 1.7790e-01 insignificant -0.0664107 1.7959e-01 lowCoverage 1.00000000 lowCoverage chr1 24881731 24882731 567 ENSG00000209656 0.668763 497 7 0.6106052 318 8 0.610248 108 8 0.670905 501 7 0.762000 148 8 0.669346 504 8 0.5193856 147 7 0.673928 154 8 0.8089286 99 7 0.660905 103 5 0.693788 477 8 0.550000 64 3 0.729708 88 5 0.7412836 104 5 0.6147324 148 5 0.747538 79 3 0.5000000 2 0 0.552774 589 8 0.662293 308 7 0.695392 334 7 0.653846 79 4 0.7047619 43 2 0.701967 162 5 0.745940 102 6 0.810027 200 4 0.6986956 351 8 0.661458 56 3 0.706401 46 4 0.658457 251 5 0.6991113 356 7 0.7328442 334 7 0.683154 397 7 0.6484060 234 8 0.5971159 183 7 0.6116083 343 8 0.571429 25 3 0.6311188 217 4 0.5130966 380 7 0.607033 434 7 0.7246544 375 7 0.7809399 594 7 0.5936482 589 4 0.7291956 411 7 0.8309745 0.7700184 0.707343 0.881937 0.876217 0.863405 0.851575 0.8274091 0.9494092 0.905016 0.883700 0.8552632 0.868826 0.8871306 0.8557970 0.8829574 0.6487312 0.6719354 0.8602336 0.8876360 0.843262 0.8380952 0.886132 0.9040229 0.8114493 0.8790579 0.7952694 0.9264264 0.8641124 0.887618 0.9194237 0.8865588 0.7821718 0.4225765 0.72210458 0.6165414 0.6891198 0.4883771 0.8219244 0.8007157 0.8681485 0.8147298 0.8124006 2 0.805532 0.866218 -0.04369130 7 0.616780 0.664904 -4.8124e-02 0.97643793 0.00206922 weaklyHypometh 1.00000 0.344870 insignificant 0.90378924 0.01889547 weaklyHypometh 1.00000 0.716057 insignificant -0.04759580 0.04172837 weaklyHypometh 1.00000 insignificant 0.805660 0.6085384 0.2108195 8 0.629755 0.6129528 0.0168023 4.4589e-08 9.4363e-01 hypermethylated 5.7908e-07 1.0000e+00 hypermethylated 5.4637e-05 6.6916e-01 hypermethylated 9.1061e-04 1.0000e+00 hypermethylated 0.0616637 3.8181e-02 weaklyHypermeth 3.7949e-01 insignificant 0.805958 0.842280 0.00799888 7 0.666808 0.676045 -0.0092375 2.6720e-01 2.9722e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.8838e-02 9.1181e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0299680 4.9383e-01 insignificant 1.0000e+00 insignificant 0.866582 0.6085384 0.25937500 7 0.738782 0.6129528 1.2583e-01 9.1753e-10 9.9052e-01 hypermethylated 1.5551e-08 1.0000e+00 hypermethylated 2.1983e-06 8.9233e-01 hypermethylated 5.9414e-05 1.0000e+00 hypermethylated 0.1092595 1.1116e-03 weaklyHypermeth 2.0973e-02 weaklyHypermeth 0.866526 0.842280 0.05149479 7 0.706130 0.676045 0.03008417 3.9182e-03 9.4793e-01 weaklyHypermeth 8.9050e-02 1.0000e+00 weaklyHypermeth 4.1931e-03 9.9534e-01 weaklyHypermeth 1.6127e-01 1.0000e+00 insignificant 0.0176278 6.6963e-01 insignificant 1.00000000 insignificant 0.6082549 0.842280 -0.2022150 7 0.5645719 0.676045 -0.11147341 4.2441e-01 7.9478e-05 hypomethylated 1.0000e+00 1.1194e-03 hypomethylated 7.0057e-01 8.0527e-04 hypomethylated 1.0000e+00 1.5650e-02 hypomethylated -0.0916318 6.9245e-02 insignificant 0.51787498 insignificant chr1 25767591 25768591 598 LDLRAP1 ENSG00000157978 0.739307 281 10 0.7123097 518 9 0.655132 256 9 0.723648 326 12 0.661012 166 7 0.678656 363 8 0.6128353 226 7 0.753563 299 9 0.5965025 255 7 0.613933 170 9 0.693153 484 11 0.590670 84 7 0.732527 272 7 0.7003660 150 7 0.6299242 222 7 0.725023 82 5 0.5227273 23 2 0.603707 322 7 0.818301 349 6 0.535439 267 6 0.569582 107 7 0.5852520 117 9 0.622249 178 7 0.682498 177 7 0.482455 126 7 0.7252524 580 9 0.655661 212 7 0.293759 102 5 0.724895 361 9 0.8101841 587 9 0.8112789 525 9 0.728372 390 12 0.2379073 288 9 0.1657371 167 7 0.3535354 344 9 0.070076 83 3 0.2715163 300 9 0.2275316 525 12 0.731649 283 10 0.6201195 252 9 0.7228039 229 10 0.5509198 211 7 0.6689346 214 10 0.5348893 0.4236753 0.417022 0.494546 0.412099 0.555683 0.586843 0.5086235 0.5009964 0.429857 0.582506 0.4014607 0.675515 0.5391825 0.5598495 0.6166160 NA 0.4548440 0.6473160 0.5549964 0.380409 0.5840134 0.477186 0.4472318 0.3813126 0.4658343 0.4486345 0.3346860 0.5959317 0.446086 0.6127609 0.6064417 0.3616270 0.0941343 0.16368673 0.3790351 0.3837547 0.6068805 0.5997441 0.5339726 0.4586978 0.3638760 0.6044242 4 0.643988 0.667149 0.00591806 9 0.604673 0.680654 -7.5981e-02 0.83380824 0.60799233 insignificant 1.00000 1.000000 insignificant 0.73986153 0.78290924 insignificant 1.00000 1.000000 insignificant 0.02398369 0.60649051 insignificant 1.00000 insignificant 0.644801 0.4106620 0.2433559 9 0.741722 0.2324612 0.5092607 3.4284e-47 1.0000e+00 hypermethylated 2.8570e-45 1.0000e+00 hypermethylated 1.6703e-14 1.0000e+00 hypermethylated 4.1758e-12 1.0000e+00 hypermethylated 0.4438862 1.6883e-05 hypermethylated 5.8217e-04 hypermethylated 0.642942 0.618565 0.00857809 7 0.700037 0.712523 -0.0124864 4.8777e-02 8.2890e-01 weaklyHypermeth 7.8673e-01 1.0000e+00 insignificant 2.1579e-01 9.5815e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0060515 8.7763e-01 insignificant 1.0000e+00 insignificant 0.667441 0.4106620 0.24209924 9 0.708459 0.2324612 4.7600e-01 5.3716e-31 1.0000e+00 hypermethylated 3.3573e-29 1.0000e+00 hypermethylated 6.6363e-11 1.0000e+00 hypermethylated 4.7402e-09 1.0000e+00 hypermethylated 0.4199026 3.3403e-06 hypermethylated 1.8557e-04 hypermethylated 0.666667 0.618687 -0.00768946 7 0.765735 0.703925 0.06180999 2.4745e-01 9.2982e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.0639e-01 9.8513e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0179322 7.4480e-01 insignificant 1.00000000 insignificant 0.4145476 0.618243 -0.2332545 7 0.2712047 0.688567 -0.41736233 1.0000e+00 8.6317e-15 hypomethylated 1.0000e+00 6.1655e-13 hypomethylated 1.0000e+00 1.9588e-07 hypomethylated 1.0000e+00 1.6323e-05 hypomethylated -0.4378348 1.4203e-05 hypomethylated 0.00196913 hypomethylated chr1 25767691 25768691 599 LDLRAP1 ENSG00000157978 0.814092 176 8 0.8057859 388 7 0.732166 144 7 0.783541 182 10 0.790449 93 5 0.726125 195 6 0.6436485 113 5 0.831776 168 7 0.6845238 80 5 0.681920 75 7 0.725765 352 9 0.695238 31 5 0.761062 125 5 0.7904762 72 5 0.6558442 98 5 0.795238 31 3 NA 0 0 0.652120 175 5 0.869770 245 4 0.554514 160 4 0.657645 62 5 0.5979545 55 7 0.685323 95 5 0.776872 115 5 0.555873 70 5 0.7896382 374 7 0.721389 89 5 0.316667 38 3 0.790686 217 7 0.8621708 396 7 0.8492193 356 7 0.764771 252 10 0.2188133 176 7 0.2130906 94 5 0.4545455 235 7 0.010101 74 2 0.2451963 190 7 0.1603776 373 10 0.760470 162 8 0.6579365 135 7 0.8261905 105 8 0.6409754 98 5 0.6782895 126 8 0.7982582 0.6906343 0.585596 0.793107 0.746460 0.753203 0.744250 0.7340724 0.7022203 0.719196 0.734697 0.6214465 0.705955 0.7765833 0.6825000 0.7366667 NA 0.6218033 0.7252628 0.7261007 0.676005 0.7176364 0.759839 0.7453069 0.6445778 0.7403216 0.6636111 0.4118333 0.8104851 0.775198 0.7922196 0.7957342 0.4359705 0.3398248 0.59090909 0.3833167 0.3758091 0.3091082 0.6861624 0.6726984 0.7249921 0.6342097 0.6941863 2 0.795384 0.832148 -0.02019470 7 0.627962 0.717591 -8.9629e-02 0.92732837 0.46928594 insignificant 1.00000 1.000000 insignificant 0.86810319 0.64904678 insignificant 1.00000 1.000000 insignificant 0.03917853 0.42342998 insignificant 1.00000 insignificant 0.797237 0.4500876 0.3384976 7 0.795616 0.2205497 0.5750667 3.1273e-47 1.0000e+00 hypermethylated 2.8430e-45 1.0000e+00 hypermethylated 4.8215e-14 1.0000e+00 hypermethylated 9.2849e-12 1.0000e+00 hypermethylated 0.5195085 1.5062e-04 hypermethylated 3.8621e-03 hypermethylated 0.795804 0.779743 0.01233406 5 0.751252 0.764230 -0.0129782 3.0357e-02 8.2251e-01 weaklyHypermeth 5.4486e-01 1.0000e+00 insignificant 1.4288e-01 9.6064e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0237568 5.6767e-01 insignificant 1.0000e+00 insignificant 0.833096 0.4500876 0.34574480 7 0.762344 0.2205497 5.4179e-01 1.5335e-31 1.0000e+00 hypermethylated 1.0953e-29 1.0000e+00 hypermethylated 3.6572e-11 1.0000e+00 hypermethylated 3.5223e-09 1.0000e+00 hypermethylated 0.4803300 4.7736e-05 hypermethylated 1.9094e-03 hypermethylated 0.833413 0.779200 0.02114522 5 0.820104 0.743324 0.07678072 1.5230e-01 9.6330e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.6939e-01 9.9665e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0154218 7.8783e-01 insignificant 1.00000000 insignificant 0.4564831 0.779388 -0.3474591 5 0.2646596 0.740653 -0.47599355 1.0000e+00 4.3535e-15 hypomethylated 1.0000e+00 3.3489e-13 hypomethylated 1.0000e+00 3.0145e-07 hypomethylated 1.0000e+00 2.3188e-05 hypomethylated -0.4957518 9.1086e-05 hypomethylated 0.00586261 hypomethylated chr1 26204695 26205695 617 ENSG00000212341,ENSG00000222349 0.808188 237 8 0.7894595 203 5 0.730357 104 5 0.777794 167 8 0.729543 93 5 0.704399 397 8 0.7132675 88 5 0.784871 155 5 0.7550293 106 5 0.756488 108 5 0.771249 189 5 0.784434 76 4 0.809291 122 5 0.7000000 19 2 0.7957126 122 5 0.746667 51 4 0.8100628 756 7 0.797659 173 8 0.826602 225 5 0.794404 264 8 0.636111 54 4 0.7320261 78 4 0.821010 205 8 0.706249 92 5 0.795238 39 5 0.7803671 310 8 0.760495 99 5 0.521329 65 5 0.719126 121 5 0.8205310 340 8 0.7876484 359 8 0.730546 348 8 0.7794330 204 5 0.8221587 66 5 0.6637935 228 5 0.568182 45 4 0.6940416 102 5 0.6306773 319 8 0.821885 269 8 0.7852218 301 8 0.7485507 258 8 0.7228528 192 7 0.8091741 291 8 0.7725126 0.7454554 0.692269 0.730588 0.745172 0.793710 0.690314 0.7275470 0.7261021 0.730435 0.735689 0.8007419 0.704785 0.7407732 0.7748140 0.7231939 0.7711559 0.8131656 0.7736813 0.7574857 0.745817 0.7087900 0.804949 0.7847377 0.7318124 0.7596738 0.7014325 0.6627060 0.8149785 0.810851 0.7683455 0.7144553 0.7315448 0.8161362 0.67617092 0.6081239 0.7457644 0.6587634 0.7928788 0.7913322 0.7883434 0.8170517 0.8245154 4 0.790971 0.790521 -0.00226671 8 0.775097 0.717271 5.7826e-02 0.17604391 0.60585955 insignificant 1.00000 1.000000 insignificant 0.19390717 0.88794710 insignificant 1.00000 1.000000 insignificant 0.03505086 0.20100486 insignificant 1.00000 insignificant 0.791073 0.7354772 0.0555888 5 0.787145 0.6820753 0.1050694 1.4752e-06 9.7250e-01 weaklyHypermeth 1.7153e-05 1.0000e+00 weaklyHypermeth 6.3314e-03 9.7010e-01 weaklyHypermeth 6.5952e-02 1.0000e+00 weaklyHypermeth 0.0762263 1.0580e-01 insignificant 7.7227e-01 insignificant 0.791073 0.819222 -0.03180520 8 0.787145 0.702939 0.0842056 9.3360e-01 6.7304e-02 insignificant 1.0000e+00 8.9321e-01 insignificant 3.6181e-01 5.9186e-02 insignificant 1.0000e+00 7.7876e-01 insignificant -0.0082629 6.9945e-01 insignificant 1.0000e+00 insignificant 0.794090 0.7354772 0.05860655 5 0.778449 0.6820753 9.6374e-02 3.6764e-05 9.3458e-01 weaklyHypermeth 3.5350e-04 1.0000e+00 weaklyHypermeth 2.9762e-02 8.6961e-01 weaklyHypermeth 2.0110e-01 1.0000e+00 insignificant 0.0411754 3.9075e-01 insignificant 1.0000e+00 insignificant 0.794090 0.819222 -0.03325019 8 0.778449 0.702939 0.07550987 3.8040e-01 8.0998e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 8.1283e-01 7.7640e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0433137 1.8156e-01 insignificant 1.00000000 insignificant 0.7354772 0.819222 -0.0937460 5 0.6820753 0.702939 -0.02086382 9.8839e-01 1.2922e-04 weaklyHypometh 1.0000e+00 1.7687e-03 weaklyHypometh 9.9807e-01 2.0804e-02 weaklyHypometh 1.0000e+00 1.9933e-01 insignificant -0.0844891 8.7882e-02 insignificant 0.59177901 insignificant chr1 26293695 26294695 623 TRIM63 ENSG00000158022 0.161508 182 5 0.0865795 218 5 0.244857 160 5 0.186847 125 5 0.069916 159 5 0.121212 228 5 0.1335637 123 5 0.111905 215 5 0.0697090 290 5 0.115700 323 5 0.390123 166 5 0.191859 192 5 0.074860 304 5 0.1112845 175 5 0.0852133 321 5 0.115629 146 5 0.0561036 142 5 0.125830 210 5 0.213508 128 5 0.066806 190 5 0.177778 36 4 0.1429988 177 5 0.096494 139 5 0.088384 91 5 0.195209 74 5 0.1336499 238 5 0.151035 236 5 0.039600 130 5 0.300423 115 5 0.1238798 279 5 0.1563258 187 5 0.222303 160 5 0.0557242 169 5 0.0181818 101 5 0.2333333 142 5 0.000000 25 2 0.1379758 146 5 0.0111280 184 5 0.304781 196 5 0.2541010 170 5 0.0651341 133 5 0.1538861 168 5 0.2979784 194 5 0.2176296 0.0858786 0.267095 0.217583 0.104100 0.150841 0.144059 0.1542172 0.0784324 0.147692 0.295226 0.2025276 0.082535 0.1315897 0.1071590 0.1684166 0.0791201 0.1745687 0.0647748 0.0793683 0.254248 0.1712144 0.137787 0.1428996 0.1869089 0.1415133 0.1641666 0.0535277 0.1712322 0.129455 0.1560861 0.2534070 0.0659386 0.0267380 0.15359477 0.0000000 0.1369700 0.0114142 0.2931967 0.2704773 0.0867422 0.1830449 0.2968972 5 0.140105 0.148765 -0.01265858 5 0.133796 0.136605 -2.8089e-03 0.87396950 0.28467263 insignificant 1.00000 1.000000 insignificant 0.91432923 0.20033318 insignificant 1.00000 1.000000 insignificant -0.01568919 0.55764908 lowCoverage 1.00000 lowCoverage 0.140105 0.0547588 0.0851462 5 0.133796 0.0499525 0.0838440 2.9345e-06 9.7842e-01 weaklyHypermeth 3.2247e-05 1.0000e+00 weaklyHypermeth 1.1075e-05 9.9694e-01 weaklyHypermeth 2.2601e-04 1.0000e+00 weaklyHypermeth 0.0605935 1.8592e-01 lowCoverage 1.0000e+00 lowCoverage 0.140105 0.250871 -0.09990644 5 0.133796 0.204266 -0.0704697 9.7625e-01 1.4042e-07 weaklyHypometh 1.0000e+00 1.5603e-05 weaklyHypometh 9.7342e-01 6.7335e-03 weaklyHypometh 1.0000e+00 2.0405e-01 insignificant -0.0785255 1.7068e-01 insignificant 1.0000e+00 insignificant 0.148765 0.0547588 0.09779532 5 0.136605 0.0499525 8.6653e-02 1.1067e-05 9.8803e-01 weaklyHypermeth 1.1900e-04 1.0000e+00 weaklyHypermeth 3.2664e-05 9.9936e-01 weaklyHypermeth 6.1630e-04 1.0000e+00 weaklyHypermeth 0.0762827 1.1023e-01 lowCoverage 7.2999e-01 lowCoverage 0.148765 0.250871 -0.08875475 5 0.136605 0.204266 -0.06766081 9.9142e-01 2.1396e-04 weaklyHypometh 1.0000e+00 1.7430e-02 weaklyHypometh 9.8277e-01 1.2666e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0628363 2.6094e-01 lowCoverage 1.00000000 lowCoverage 0.0547588 0.250871 -0.1912275 5 0.0499525 0.204266 -0.15431373 9.9995e-01 1.3499e-07 weaklyHypometh 1.0000e+00 3.9885e-06 weaklyHypometh 9.9998e-01 1.1409e-04 weaklyHypometh 1.0000e+00 3.9972e-03 weaklyHypometh -0.1391190 4.6987e-02 lowCoverage 0.38201061 lowCoverage chr1 26506995 26507995 629 UBXN11 ENSG00000158062 0.773567 112 5 0.7717547 115 5 0.613542 68 5 0.539225 139 5 0.686813 45 5 0.706112 191 6 0.8804291 48 5 0.848635 94 5 0.7753846 41 5 0.864347 57 5 0.593744 160 5 0.800000 19 1 0.638615 88 5 0.6390625 49 4 0.7500297 66 5 0.914286 21 2 0.8000000 5 0 0.579397 146 5 0.680252 86 2 0.606253 120 5 0.550595 24 2 0.6968254 60 5 0.512559 93 5 0.599567 38 2 0.892063 37 5 0.6761905 69 3 0.720777 64 4 0.429293 28 2 0.564663 89 5 0.7603416 71 2 0.5164931 52 2 0.775631 147 5 0.7086039 96 5 0.5760668 63 5 0.5382955 91 5 0.673333 17 2 0.6100390 64 5 0.5357990 77 5 0.840210 88 5 0.8762130 108 5 0.7805556 110 5 0.7690018 79 5 0.8177632 92 5 0.7275050 0.6107129 0.627655 0.652610 0.631479 0.728918 0.820821 0.8181205 0.6916270 0.778648 0.709565 0.7389381 0.786383 0.8058628 0.7034294 0.8176991 0.6695556 0.6892459 0.7613074 0.7411865 0.730088 0.6394859 0.724643 0.7144006 0.8348083 0.6833123 0.6266218 0.5457227 0.7383270 0.719425 0.7321165 0.7137578 0.6559591 0.5458185 0.69908286 0.6946903 0.5329141 0.5765206 0.8274734 0.7732892 0.7855211 0.6840538 0.8016127 2 0.731737 0.700777 0.02237781 5 0.687342 0.571856 1.1549e-01 0.03812221 0.98423685 weaklyHypermeth 1.00000 1.000000 insignificant 0.02066757 0.96352268 weaklyHypermeth 1.00000 1.000000 insignificant 0.08182256 0.09052189 lowCoverage 1.00000 lowCoverage 0.731737 0.6323529 0.0949128 5 0.687342 0.5742901 0.1130519 3.6930e-05 9.9860e-01 weaklyHypermeth 3.4514e-04 1.0000e+00 weaklyHypermeth 1.0798e-04 9.9730e-01 weaklyHypermeth 1.6360e-03 1.0000e+00 weaklyHypermeth 0.1160495 9.5192e-03 lowCoverage 1.2050e-01 lowCoverage 0.731737 0.788260 -0.04966358 5 0.687342 0.838849 -0.1515070 9.9797e-01 4.1275e-02 weaklyHypometh 1.0000e+00 6.1605e-01 insignificant 9.9204e-01 6.9190e-02 insignificant 1.0000e+00 8.8706e-01 insignificant -0.0936762 8.3544e-03 lowCoverage 2.0886e-01 lowCoverage 0.700777 0.6323529 0.06917333 5 0.571856 0.5742901 -2.4345e-03 2.9212e-03 9.0587e-01 weaklyHypermeth 1.9606e-02 1.0000e+00 weaklyHypermeth 1.8851e-02 9.3627e-01 weaklyHypermeth 1.3282e-01 1.0000e+00 insignificant 0.0342270 4.9081e-01 lowCoverage 1.0000e+00 lowCoverage 0.700777 0.788260 -0.06606235 5 0.571856 0.838849 -0.26699344 9.9997e-01 1.9966e-03 weaklyHypometh 1.0000e+00 9.5075e-02 weaklyHypometh 9.9982e-01 1.0959e-02 weaklyHypometh 1.0000e+00 6.0882e-01 insignificant -0.1754988 1.1145e-03 lowCoverage 0.08572727 lowCoverage 0.6323529 0.788260 -0.1447705 5 0.5742901 0.838849 -0.26455896 1.0000e+00 6.5920e-06 weaklyHypometh 1.0000e+00 1.2925e-04 weaklyHypometh 1.0000e+00 1.2471e-04 weaklyHypometh 1.0000e+00 4.1568e-03 weaklyHypometh -0.2097258 2.7586e-04 lowCoverage 0.01199394 lowCoverage chr1 26603795 26604795 633 ZNF683 ENSG00000176083 0.688596 373 9 0.7203625 229 9 0.547569 140 9 0.688470 219 9 0.738310 93 9 0.734996 386 9 0.6216991 185 9 0.749520 201 9 0.6549303 109 9 0.786876 138 6 0.755943 348 9 0.558983 79 6 0.709523 149 9 0.7343750 22 1 0.6830487 191 9 0.469896 91 6 0.7192460 72 6 0.744064 197 9 0.834853 170 9 0.647357 267 9 0.779545 51 5 0.7789825 102 8 0.682047 159 6 0.822627 81 7 0.692008 54 5 0.7510058 247 9 0.861823 86 7 0.666667 42 4 0.735501 202 9 0.6373807 251 9 0.8185932 229 9 0.610646 441 9 0.5666379 204 9 0.7417572 169 9 0.4759693 167 7 0.702976 69 9 0.5831019 100 7 0.6917032 244 9 0.671432 299 9 0.7656073 300 9 0.7609609 252 9 0.7399031 275 8 0.6340664 327 9 0.7956439 0.7551190 0.646472 0.772795 0.777137 0.805621 0.697113 0.8035846 0.8117083 0.802462 0.785904 0.7532013 0.752773 0.7993282 0.7786383 0.6372432 0.7798655 0.8048954 0.8587088 0.8189150 0.869433 0.7827908 0.777776 0.8795849 0.8233083 0.8338169 0.8580586 0.7990196 0.8130900 0.836080 0.8357064 0.8175620 0.7208583 0.7955442 0.64617281 0.7058373 0.6849615 0.7343269 0.8168887 0.8884153 0.8002576 0.8351168 0.8388561 4 0.745559 0.802057 -0.05588520 9 0.683837 0.668791 1.5047e-02 0.96206203 0.00037595 weaklyHypometh 1.00000 0.093987 weaklyHypometh 0.99827169 0.00031701 weaklyHypometh 1.00000 0.063402 weaklyHypometh -0.04697133 0.13029189 insignificant 1.00000 insignificant 0.745758 0.6946485 0.0482483 9 0.691459 0.5851069 0.1063522 4.0297e-03 9.9806e-01 weaklyHypermeth 2.5505e-02 1.0000e+00 weaklyHypermeth 2.8051e-02 9.9205e-01 weaklyHypermeth 2.0002e-01 1.0000e+00 insignificant 0.0624067 2.1298e-01 insignificant 1.0000e+00 insignificant 0.745758 0.810048 -0.06617461 9 0.691459 0.665211 0.0262483 9.8061e-01 2.9698e-03 weaklyHypometh 1.0000e+00 9.8993e-02 weaklyHypometh 9.9161e-01 3.7044e-03 weaklyHypometh 1.0000e+00 1.3036e-01 insignificant -0.0249630 4.6368e-01 insignificant 1.0000e+00 insignificant 0.803093 0.6946485 0.10697982 9 0.693226 0.5851069 1.0812e-01 1.7171e-07 9.9996e-01 weaklyHypermeth 2.3204e-06 1.0000e+00 weaklyHypermeth 8.6975e-05 1.0000e+00 weaklyHypermeth 1.4996e-03 1.0000e+00 weaklyHypermeth 0.1093780 4.8998e-02 weaklyHypermeth 4.2240e-01 insignificant 0.802367 0.810048 -0.00776850 9 0.684135 0.665211 0.01892455 6.2867e-01 5.5547e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.0139e-01 9.6055e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0220083 5.4100e-01 insignificant 1.00000000 insignificant 0.6950578 0.811034 -0.1089298 9 0.5936175 0.698398 -0.10478094 1.0000e+00 7.2464e-06 weaklyHypometh 1.0000e+00 1.3935e-04 weaklyHypometh 9.9999e-01 2.5814e-04 weaklyHypometh 1.0000e+00 7.0861e-03 weaklyHypometh -0.0873696 1.1185e-01 insignificant 0.70343899 insignificant chr1 26847095 26848095 641 ENSG00000218812 0.817409 269 9 0.6708494 257 11 0.773958 150 9 0.865545 252 11 0.810205 254 9 0.793377 486 9 0.8046295 225 9 0.746496 313 9 0.5550248 251 9 0.850215 267 9 0.739489 553 15 0.670293 229 9 0.850778 351 9 0.8437500 56 5 0.7608846 329 9 0.711133 186 6 0.7939338 215 8 0.758476 221 9 0.827820 472 9 0.857527 359 9 0.701684 120 9 0.7274102 123 9 0.718765 185 11 0.710763 146 9 0.768783 131 9 0.8048408 384 11 0.711201 136 8 0.645585 102 6 0.809587 317 9 0.7188826 379 11 0.8527644 329 11 0.686855 469 11 0.6654959 214 11 0.7768505 344 9 0.4776451 257 9 0.789551 110 7 0.6636426 182 7 0.7024619 300 11 0.823155 442 11 0.8933666 305 11 0.7675294 261 11 0.8764380 270 9 0.8312698 293 11 0.7863708 0.6992892 0.758280 0.885668 0.820183 0.726708 0.735532 0.8500064 0.7712051 0.834140 0.824446 0.7426283 0.869955 0.8454837 0.8498683 0.7833980 0.7814870 0.8377386 0.8066050 0.7847319 0.846369 0.7266498 0.726461 0.8060274 0.7891743 0.7882739 0.7790264 0.7893224 0.7528313 0.802821 0.7969231 0.7917075 0.7327244 0.7035452 0.76482268 0.7715968 0.7274720 0.7171707 0.8630738 0.8581735 0.7980170 0.8589621 0.8447963 6 0.793152 0.764268 0.02874138 9 0.806687 0.793151 1.3536e-02 0.31548696 0.84910600 insignificant 1.00000 1.000000 insignificant 0.51903025 0.93753546 insignificant 1.00000 1.000000 insignificant 0.03699624 0.14055644 insignificant 1.00000 insignificant 0.792964 0.7071784 0.0884381 9 0.797800 0.6793267 0.1184733 6.2016e-11 9.9992e-01 weaklyHypermeth 1.0511e-09 1.0000e+00 weaklyHypermeth 5.8399e-05 9.9971e-01 weaklyHypermeth 9.5736e-04 1.0000e+00 weaklyHypermeth 0.0958151 9.5278e-02 insignificant 7.1103e-01 insignificant 0.793676 0.849141 -0.03824871 9 0.813673 0.856467 -0.0427938 9.9994e-01 1.5792e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7729e-01 2.7901e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0632622 4.9105e-02 weaklyHypometh 6.2158e-01 insignificant 0.764101 0.7071784 0.06052483 9 0.773451 0.6793267 9.4124e-02 9.0007e-06 9.9991e-01 weaklyHypermeth 9.7834e-05 1.0000e+00 weaklyHypermeth 1.8663e-02 9.9838e-01 weaklyHypermeth 1.3282e-01 1.0000e+00 insignificant 0.0588188 2.7247e-01 insignificant 1.0000e+00 insignificant 0.766285 0.849141 -0.06354494 9 0.827799 0.856467 -0.02866785 9.9877e-01 1.4003e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9953e-01 4.3113e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.1002584 5.8167e-03 weaklyHypometh 0.21543348 insignificant 0.7087518 0.848562 -0.1260797 11 0.7025892 0.841358 -0.13876889 1.0000e+00 1.1160e-05 weaklyHypometh 1.0000e+00 1.9929e-04 weaklyHypometh 1.0000e+00 4.9609e-03 weaklyHypometh 1.0000e+00 6.5275e-02 weaklyHypometh -0.1590773 1.6509e-02 weaklyHypometh 0.19197078 insignificant chr1 27769795 27770795 689 WASF2 ENSG00000158195 0.285966 53 4 0.3496342 59 5 0.394368 67 5 0.307879 33 2 0.266270 72 5 0.208352 92 5 0.3500000 63 5 0.355322 61 5 0.3275325 58 5 0.223295 87 5 0.302241 95 5 0.326667 35 5 0.317794 45 4 0.1900000 34 4 0.1514815 67 5 0.333333 43 3 0.2500000 8 0 0.335979 42 4 0.185893 84 4 0.254405 70 5 0.136617 68 5 0.0476190 17 2 0.244048 57 5 0.320280 89 5 0.070707 25 2 0.2224034 95 5 0.106193 162 5 0.140000 78 4 0.322397 59 4 0.2641026 76 5 0.1487830 111 5 0.468254 54 3 0.2025000 94 5 0.3085358 95 4 0.3333333 88 5 0.000000 2 0 0.2269841 69 5 0.2174287 117 5 0.047141 70 5 0.2635294 50 4 0.2626263 32 4 0.2490909 54 3 0.1217338 61 4 0.2898655 0.3380461 0.323173 0.315152 0.259905 0.212102 0.329091 0.3000185 0.3043844 0.220916 0.281669 0.2610667 0.258447 0.1136000 0.1128593 0.2653333 0.2606796 0.1125079 0.1647929 0.1955048 0.212939 0.0712691 0.196257 0.2398062 0.0826667 0.2254493 0.1272138 0.1586667 0.3042791 0.214769 0.1381168 0.4028571 0.1454000 0.2090124 0.38400000 0.1839549 0.1653651 0.1615333 0.0475033 0.1053647 0.1448889 0.0852364 0.0784225 2 0.254281 0.203143 0.04854917 5 0.392567 0.262365 1.3020e-01 0.01760987 0.95076024 weaklyHypermeth 1.00000 1.000000 insignificant 0.01535347 0.98373714 weaklyHypermeth 1.00000 1.000000 insignificant 0.07820358 0.06036046 lowCoverage 1.00000 lowCoverage 0.254281 0.2000000 0.0590938 5 0.392567 0.2052234 0.1873433 1.3194e-03 1.1251e-01 weaklyHypermeth 9.4919e-03 1.0000e+00 weaklyHypermeth 1.2662e-03 4.1797e-01 weaklyHypermeth 1.4897e-02 1.0000e+00 weaklyHypermeth 0.0710236 2.0783e-01 lowCoverage 1.0000e+00 lowCoverage 0.254281 0.078652 0.17077613 4 0.392567 0.262549 0.1300177 1.3756e-05 9.9999e-01 lowCoverage 7.2398e-04 1.0000e+00 lowCoverage 1.4149e-04 9.9372e-01 lowCoverage 1.2862e-02 1.0000e+00 lowCoverage 0.0969964 9.3219e-02 lowCoverage 8.6314e-01 lowCoverage 0.203143 0.2000000 0.01502032 5 0.262365 0.2052234 5.7142e-02 1.2524e-01 4.4492e-02 inconclusive 5.5415e-01 1.0000e+00 insignificant 1.0165e-01 1.8972e-01 insignificant 5.6474e-01 1.0000e+00 insignificant -0.0071800 9.0660e-01 lowCoverage 1.0000e+00 lowCoverage 0.203143 0.078652 0.14209091 4 0.262365 0.262549 -0.00018386 4.0793e-04 9.1594e-01 lowCoverage 1.5109e-02 1.0000e+00 lowCoverage 8.5245e-03 8.7353e-01 lowCoverage 2.5072e-01 1.0000e+00 lowCoverage 0.0187928 7.4783e-01 lowCoverage 1.00000000 lowCoverage 0.2000000 0.078652 0.1677664 4 0.2052234 0.262549 -0.05732562 1.5587e-04 9.0644e-01 lowCoverage 1.4170e-02 1.0000e+00 lowCoverage 1.0482e-01 6.5484e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0259728 7.0033e-01 lowCoverage 1.00000000 lowCoverage chr1 28268595 28269595 702 EYA3 ENSG00000158161 0.625687 224 5 0.5879835 218 5 0.466749 84 4 0.571833 140 5 0.530000 66 3 0.752908 315 5 0.4574860 84 5 0.733794 98 5 0.6564103 52 5 0.622121 36 3 0.688891 223 5 0.533333 11 0 0.684314 53 5 0.7500000 21 2 0.7603175 54 5 0.750000 18 0 0.7500000 4 0 0.747834 152 5 0.811905 122 5 0.572684 159 5 0.700000 20 2 1.0000000 6 0 0.762578 154 5 0.778220 101 5 0.525000 22 2 0.6684502 218 5 0.726667 36 5 0.733333 15 1 0.779078 114 5 0.6337434 250 5 0.7047314 244 5 0.708090 173 5 0.6740860 79 3 0.5440683 92 5 0.6716502 236 5 0.000000 3 0 0.6898081 88 5 0.6820206 253 5 0.624470 206 5 0.6136375 178 5 0.6516934 140 5 0.6762728 177 5 0.6732488 195 5 0.7342884 0.5782312 0.522583 0.640408 0.493400 0.700726 0.530252 0.7219137 0.7615385 0.648939 0.693045 0.5133333 0.645686 0.7650000 0.7700000 0.7450000 0.7006406 0.6789744 0.8214935 0.6660377 0.712500 0.8972493 0.639712 0.8200568 0.4775000 0.6675945 0.7020000 0.7466667 0.7524468 0.631358 0.7157808 0.6932254 0.6811935 0.4920550 0.69282327 NA 0.6980010 0.6770778 0.6059683 0.5861500 0.5914943 0.6827732 0.6471437 0 0.690722 0.698225 -0.01151410 5 0.610717 0.762231 -1.5151e-01 0.89087581 0.04696755 weaklyHypometh 1.00000 0.903222 insignificant 0.96988182 0.15093338 insignificant 1.00000 1.000000 insignificant -0.07394505 0.07697039 lowCoverage 1.00000 lowCoverage 0.692706 0.6431425 0.0454121 5 0.688417 0.6630047 0.0254118 1.6240e-01 6.8780e-01 insignificant 7.0609e-01 1.0000e+00 insignificant 1.7600e-01 9.3261e-01 insignificant 9.3615e-01 1.0000e+00 insignificant 0.1091070 3.7692e-01 lowCoverage 1.0000e+00 lowCoverage 0.692706 0.683036 0.01591413 5 0.688417 0.656155 0.0322613 2.6205e-01 7.5823e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.3182e-01 9.5896e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0048481 8.5849e-01 lowCoverage 1.0000e+00 lowCoverage 0.698001 0.6431425 0.05645121 5 0.714677 0.6630047 5.1672e-02 1.5975e-01 9.5955e-01 insignificant 6.8860e-01 1.0000e+00 insignificant 5.6288e-02 9.9691e-01 insignificant 3.2990e-01 1.0000e+00 insignificant 0.1830521 1.6538e-01 lowCoverage 9.7284e-01 lowCoverage 0.698001 0.683036 0.02824011 5 0.714677 0.656155 0.05852168 7.5543e-02 7.5124e-01 insignificant 9.5625e-01 1.0000e+00 insignificant 5.0994e-02 9.0233e-01 insignificant 8.9463e-01 1.0000e+00 insignificant 0.0787932 3.8585e-02 lowCoverage 0.64308887 lowCoverage 0.6431425 0.683036 -0.0385626 5 0.6630047 0.656155 0.00684950 4.7387e-01 4.9116e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.8086e-01 3.3837e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.1042589 3.9241e-01 lowCoverage 1.00000000 lowCoverage chr1 28352395 28353395 705 ENSG00000209763 0.739113 121 5 0.8350388 96 5 0.488293 148 5 0.833966 65 5 0.749486 66 5 0.637407 160 5 0.8200032 105 5 0.865000 68 5 0.8323077 56 5 0.898810 51 3 0.840302 169 5 0.870000 38 3 0.740801 55 5 0.8314914 72 5 0.8350000 68 5 0.933333 45 5 0.9954021 437 3 0.729788 80 5 0.911905 71 3 0.877000 88 5 0.907738 40 5 1.0000000 6 0 0.440478 104 5 0.723810 37 5 0.700000 16 2 0.4987231 164 6 0.866667 80 3 0.914286 23 2 0.663426 58 5 0.7355374 166 5 0.6374308 185 6 0.847619 86 5 0.7575983 91 5 0.9692308 41 3 0.3948413 37 2 1.000000 6 0 0.6721292 68 5 0.6815118 209 5 0.662950 152 5 0.7392150 152 5 0.9164706 70 5 0.7144421 116 5 0.6510603 111 5 0.8347576 0.8350388 0.585952 0.833966 0.749486 0.764888 0.820003 0.8650000 0.8323077 0.878571 0.840302 0.8700000 0.888961 0.8314914 0.8350000 0.9333333 0.9054938 0.8757460 0.9119048 0.8770000 0.889286 0.8877763 0.616669 0.7238095 0.7000000 0.5830831 0.8666667 0.9142857 0.7961111 0.682645 0.7149169 0.8476190 0.7575983 0.9692308 0.47380952 0.8417610 0.6721292 0.7511475 0.7955398 0.8349011 0.9164706 0.7144421 0.7812724 0 0.858184 0.708808 0.12291916 5 0.752251 0.609602 1.4265e-01 0.00011259 0.99653540 weaklyHypermeth 0.11259 1.000000 insignificant 0.25532019 0.95046177 insignificant 1.00000 1.000000 insignificant 0.06857948 0.23088067 lowCoverage 1.00000 lowCoverage 0.858115 0.7367257 0.0884057 5 0.710959 0.6634075 0.0475517 3.9794e-03 9.8078e-01 weaklyHypermeth 2.5346e-02 1.0000e+00 weaklyHypermeth 6.4015e-02 9.4616e-01 insignificant 3.8956e-01 1.0000e+00 insignificant 0.0673371 5.0244e-01 lowCoverage 1.0000e+00 lowCoverage 0.858184 0.808652 0.04418293 5 0.752251 0.645849 0.1064021 2.6857e-01 9.3827e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.5020e-01 9.9714e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0763948 2.0301e-01 lowCoverage 1.0000e+00 lowCoverage 0.709242 0.7367257 -0.02308564 5 0.627869 0.6634075 -3.5538e-02 5.9280e-01 5.3019e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.6292e-01 9.1866e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0012424 9.9070e-01 lowCoverage 1.0000e+00 lowCoverage 0.708808 0.808652 -0.08346130 5 0.609602 0.645849 -0.03624640 9.3448e-01 1.2015e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.5036e-01 7.0777e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0078153 9.1113e-01 lowCoverage 1.00000000 lowCoverage 0.7367257 0.809683 -0.0603037 5 0.6634075 0.670157 -0.00674927 7.3283e-01 1.2046e-01 insignificant 1.0000e+00 5.9341e-01 insignificant 8.6155e-01 5.7229e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0090577 9.3198e-01 lowCoverage 1.00000000 lowCoverage chr1 29209921 29210921 741 EPB41 ENSG00000159023 0.766287 160 3 0.6253858 111 5 0.830500 62 5 0.833901 148 4 0.776667 35 3 0.881197 83 4 0.7406747 68 5 0.783741 68 4 0.8446154 43 3 0.825000 32 3 0.819296 95 5 0.950000 22 1 0.837500 39 3 0.8666667 30 3 0.8206349 48 3 0.744444 14 2 0.9954955 224 3 0.655115 159 3 0.619079 61 3 0.576754 52 3 0.733333 12 2 1.0000000 7 0 0.855840 86 3 0.633929 42 5 0.370980 43 2 0.8884553 92 3 0.830556 29 3 0.483333 14 2 0.772992 62 3 0.8789474 119 3 0.8360606 106 5 0.596561 47 4 0.5551282 52 3 0.7206884 53 4 0.6543775 60 3 1.000000 3 0 0.7937998 92 5 0.8184848 88 5 0.831875 142 5 0.8426797 180 5 0.7290956 133 5 0.7528490 81 3 0.8788177 224 5 0.7711424 0.6575176 0.733770 0.719988 0.742857 0.793176 0.677094 0.7283134 0.7605617 0.791667 0.738912 0.9166667 0.719246 0.8042328 0.7060973 0.7179894 0.7904163 0.7457147 0.8175021 0.7425508 0.733333 0.9655624 0.763804 0.5870181 0.4916153 0.8102207 0.7220018 0.5809524 0.6058215 0.781537 0.7294132 0.5831444 0.5507326 0.5930958 0.66894692 0.9597531 0.6031119 0.7595238 0.7641369 0.7339091 0.7556995 0.7630240 0.7866917 1 0.792149 0.742770 0.02162219 3 0.692185 0.694665 -2.4804e-03 0.55948699 0.60724730 lowCoverage 1.00000 1.000000 lowCoverage 0.49298087 0.21207368 lowCoverage 1.00000 1.000000 lowCoverage 0.04956535 0.40928020 lowCoverage 1.00000 lowCoverage 0.792149 0.6896552 0.0945436 3 0.692185 0.7078854 -0.0157007 2.2235e-04 9.6588e-01 lowCoverage 1.8225e-03 1.0000e+00 lowCoverage 2.8988e-02 9.5648e-01 lowCoverage 2.0261e-01 1.0000e+00 lowCoverage 0.0325679 6.4202e-01 lowCoverage 1.0000e+00 lowCoverage 0.792149 0.789196 -0.01770187 5 0.692185 0.878269 -0.1860842 9.6639e-01 4.8534e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.0868e-01 3.0294e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0174157 6.4855e-01 lowCoverage 1.0000e+00 lowCoverage 0.742770 0.6896552 0.07103609 3 0.694665 0.7078854 -1.3220e-02 2.6236e-03 9.9426e-01 lowCoverage 1.7727e-02 1.0000e+00 lowCoverage 4.8761e-02 9.8961e-01 lowCoverage 2.9374e-01 1.0000e+00 lowCoverage -0.0169975 8.3935e-01 lowCoverage 1.0000e+00 lowCoverage 0.741641 0.788158 -0.03733090 3 0.595427 0.752802 -0.15737476 9.5739e-01 8.2700e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.9838e-01 7.4049e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0669811 2.8471e-01 lowCoverage 1.00000000 lowCoverage 0.6896552 0.789196 -0.1132060 3 0.7078854 0.878269 -0.17038356 9.9927e-01 6.6209e-04 lowCoverage 1.0000e+00 7.4392e-03 lowCoverage 9.9810e-01 3.1346e-02 lowCoverage 1.0000e+00 2.7022e-01 lowCoverage -0.0499836 4.8972e-01 lowCoverage 1.00000000 lowCoverage chr1 29357321 29358321 743 TMEM200B ENSG00000187975 0.857294 254 9 0.7581584 165 9 0.714880 82 5 0.823726 176 8 0.693464 69 8 0.807823 400 9 0.7709007 95 8 0.811557 150 8 0.6868654 90 7 0.845726 76 4 0.812472 249 9 0.725108 36 3 0.849996 143 8 0.8333333 34 2 0.7940735 123 8 0.425220 38 3 0.9023810 36 3 0.797443 119 8 0.839715 136 8 0.761701 307 9 0.826211 61 3 0.8875000 53 6 0.828768 125 8 0.926901 49 3 0.877480 37 4 0.6536302 155 8 0.847782 94 7 0.719778 65 3 0.707969 118 8 0.7588567 217 9 0.7424853 146 8 0.824287 333 9 0.7091132 137 9 0.7087482 87 7 0.6666228 109 7 0.611111 27 2 0.7406053 100 5 0.5882085 168 8 0.803268 174 9 0.7875779 225 9 0.8037096 189 9 0.7566219 167 8 0.7561772 199 8 0.8928020 0.8150081 0.786860 0.890376 0.763877 0.859791 0.801145 0.8623852 0.7753980 0.888678 0.874009 0.7505804 0.851040 0.8700506 0.8593881 0.6282696 0.9086043 0.9028319 0.8784394 0.8317716 0.947996 0.9002347 0.845396 0.8980726 0.9291356 0.8263183 0.7828121 0.8275846 0.7350761 0.824670 0.7820270 0.8758969 0.7425915 0.7415147 0.69183599 0.8169014 0.8632103 0.8299103 0.8671852 0.8575901 0.8591084 0.8595931 0.8675117 1 0.826854 0.816678 0.01323393 8 0.750639 0.812570 -6.1931e-02 0.46610367 0.83081985 insignificant 1.00000 1.000000 insignificant 0.89393891 0.49340653 insignificant 1.00000 1.000000 insignificant -0.02454525 0.46080904 insignificant 1.00000 insignificant 0.826854 0.7624398 0.0630037 8 0.750639 0.6740515 0.0765875 5.3512e-04 9.9676e-01 weaklyHypermeth 4.0539e-03 1.0000e+00 weaklyHypermeth 3.0942e-02 9.9761e-01 weaklyHypermeth 2.1049e-01 1.0000e+00 insignificant 0.1048571 7.0346e-03 weaklyHypermeth 9.1359e-02 weaklyHypermeth 0.828221 0.801887 0.00312916 8 0.802297 0.795401 0.0068959 3.7206e-01 1.8087e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.4316e-01 1.6482e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0058790 8.1507e-01 insignificant 1.0000e+00 insignificant 0.815554 0.7612179 0.04883563 8 0.738700 0.6127741 1.2593e-01 2.1728e-01 9.9890e-01 insignificant 9.2458e-01 1.0000e+00 insignificant 1.4440e-01 9.9985e-01 insignificant 7.5209e-01 1.0000e+00 insignificant 0.1294024 2.2090e-03 weaklyHypermeth 3.6817e-02 weaklyHypermeth 0.816552 0.801887 -0.00873755 8 0.791744 0.795401 -0.00365710 7.5347e-01 1.1090e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.3390e-01 4.7908e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0186662 4.8725e-01 insignificant 1.00000000 insignificant 0.7648953 0.801887 -0.0584003 8 0.7489461 0.795401 -0.04645528 9.8215e-01 2.4737e-02 weaklyHypometh 1.0000e+00 1.5269e-01 insignificant 9.9678e-01 5.7180e-02 insignificant 1.0000e+00 4.0165e-01 insignificant -0.1107361 4.7741e-03 weaklyHypometh 0.08840944 weaklyHypometh chr1 29407221 29408221 746 SFRS4 ENSG00000116350 0.679203 104 5 0.6370211 92 5 0.600694 32 2 0.666090 96 5 0.600000 32 4 0.628437 145 5 0.4620370 47 5 0.527047 89 5 0.4880952 43 5 0.589286 40 5 0.528991 140 5 0.266667 10 1 0.620098 67 5 0.7266667 25 4 0.4887137 48 5 0.479167 21 0 0.5833333 22 1 0.510709 82 5 0.716208 74 5 0.670051 122 5 0.840816 33 5 0.7444911 53 5 0.790226 61 5 0.654167 43 5 0.602020 45 5 0.6139398 111 5 0.595486 41 5 0.805556 24 2 0.650163 72 5 0.7657315 103 5 0.7397470 141 5 0.812282 138 5 0.6284091 75 5 0.6920238 65 5 0.5579365 101 5 0.600000 12 0 0.6183036 50 5 0.6696995 119 5 0.712698 66 5 0.7300000 87 5 0.7171958 110 5 0.7500000 19 2 0.6534461 78 5 0.7037308 0.7199439 0.727582 0.685607 0.740994 0.695939 0.610809 0.6431636 0.6187888 0.765528 0.755763 0.5192836 0.752344 0.7300725 0.5145045 0.6105072 0.7309783 0.6281429 0.6746732 0.6797659 0.769565 0.7405341 0.785022 0.8076087 0.6134168 0.6815697 0.7537742 0.8043478 0.6690256 0.773172 0.7530732 0.7817008 0.6479125 0.7133346 0.68862319 0.5000000 0.6939053 0.6095992 0.7207557 0.7391590 0.7264924 0.7744565 0.6575712 0 0.668670 0.736416 -0.06237888 5 0.566455 0.664007 -9.7552e-02 0.99790036 0.01939017 weaklyHypometh 1.00000 0.534171 insignificant 0.99306894 0.03671618 weaklyHypometh 1.00000 0.828933 insignificant -0.14445973 0.00036124 lowCoverage 0.36124 lowCoverage 0.668670 0.6563981 0.0268627 5 0.566455 0.5902117 -0.0237566 1.2042e-01 7.5148e-01 insignificant 5.5237e-01 1.0000e+00 insignificant 3.2784e-01 6.4235e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0543030 9.7090e-02 lowCoverage 7.1919e-01 lowCoverage 0.685027 0.725000 -0.04549548 5 0.663471 0.712839 -0.0493682 8.6453e-01 5.0852e-02 insignificant 1.0000e+00 7.1622e-01 insignificant 7.9173e-01 5.1672e-02 insignificant 1.0000e+00 7.1766e-01 insignificant -0.1392423 1.0601e-04 lowCoverage 1.4243e-02 lowCoverage 0.736416 0.6563981 0.08847264 5 0.664007 0.5902117 7.3795e-02 3.6316e-02 9.9770e-01 weaklyHypermeth 1.8624e-01 1.0000e+00 insignificant 1.0866e-01 9.9507e-01 insignificant 5.8734e-01 1.0000e+00 insignificant 0.0901567 1.3676e-02 lowCoverage 1.5196e-01 lowCoverage 0.738570 0.725000 0.01570809 5 0.729078 0.712839 0.01623831 2.2091e-01 5.2802e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.0177e-01 5.8421e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0052174 8.6643e-01 lowCoverage 1.00000000 lowCoverage 0.6586538 0.725000 -0.0725710 5 0.6443387 0.712839 -0.06850052 7.8378e-01 6.3626e-04 weaklyHypometh 1.0000e+00 7.2302e-03 weaklyHypometh 7.2395e-01 3.3154e-02 weaklyHypometh 1.0000e+00 2.8097e-01 insignificant -0.0849393 8.8123e-03 lowCoverage 0.13352002 lowCoverage chr1 29458221 29459221 747 PTPRU ENSG00000060656 0.012106 741 23 0.0134295 734 23 0.131819 929 23 0.017929 790 23 0.012344 694 23 0.054506 1530 23 0.0061728 794 23 0.067123 889 23 0.0149211 1032 23 0.013535 1107 23 0.015229 800 23 0.007281 843 23 0.011767 1019 23 0.0035531 686 23 0.0122426 1330 23 0.016820 714 23 0.0039062 329 15 0.012549 947 23 0.027334 684 23 0.055618 1179 24 0.017060 375 23 0.0067007 761 23 0.071311 487 23 0.033980 752 23 0.018809 605 23 0.0062749 999 23 0.029819 1206 23 0.023895 719 23 0.012114 753 23 0.0603942 1132 23 0.0086219 945 23 0.048531 1253 23 0.0093390 586 23 0.0700619 465 21 0.1000000 103 4 0.012476 200 13 0.1618526 583 23 0.1583735 737 23 0.053789 1041 23 0.0128535 767 21 0.0365129 661 21 0.0148895 664 23 0.0166589 1001 21 0.0093628 0.0085565 0.109808 0.010515 0.010242 0.011177 0.005755 0.0167796 0.0161747 0.016443 0.012849 0.0064580 0.006663 0.0033018 0.0083332 0.0079109 0.0071427 0.0144138 0.0170714 0.0107779 0.012143 0.0034796 0.021100 0.0291019 0.0141471 0.0036625 0.0080033 0.0100382 0.0081763 0.005405 0.0031290 0.0056586 0.0048890 0.0410982 0.06044693 0.0129142 0.0412227 0.0266440 0.0096256 0.0124153 0.0157750 0.0126563 0.0099292 21 0.018176 0.010514 0.00807135 23 0.053945 0.039104 1.4842e-02 0.19966470 0.99999829 insignificant 1.00000 1.000000 insignificant 0.32773102 0.99999188 insignificant 1.00000 1.000000 insignificant -0.00261658 0.78028182 insignificant 1.00000 insignificant 0.018180 0.0291698 -0.0089383 23 0.058705 0.1942463 -0.1355412 9.7305e-01 1.7893e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6977e-01 7.3793e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0598413 8.2388e-02 insignificant 6.3867e-01 insignificant 0.018157 0.011369 0.00509557 22 0.059839 0.035944 0.0238948 2.4139e-01 9.4925e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.5391e-01 9.1183e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0014315 8.9409e-01 insignificant 1.0000e+00 insignificant 0.010518 0.0291698 -0.01806771 23 0.042554 0.1942463 -1.5169e-01 9.9998e-01 8.7487e-03 weaklyHypometh 1.0000e+00 5.8325e-01 insignificant 9.9989e-01 7.6909e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0572247 9.3038e-02 insignificant 6.5061e-01 insignificant 0.010252 0.011369 -0.00194460 22 0.031540 0.035944 -0.00440406 9.5073e-01 4.0700e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3421e-01 5.8577e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0011851 9.0919e-01 insignificant 1.00000000 insignificant 0.0256410 0.011369 0.0129551 22 0.0708416 0.035944 0.03489756 2.0214e-01 9.9247e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.1737e-01 9.8622e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0584098 8.9027e-02 insignificant 0.59177901 insignificant chr1 29956044 29957044 752 ENSG00000221126 0.742777 354 12 0.5850770 219 12 0.622942 147 12 0.800309 306 12 0.672421 89 12 0.734616 366 12 0.6936154 163 12 0.693439 151 8 0.6720992 81 5 0.706602 126 12 0.731834 406 12 0.564802 87 9 0.687004 176 12 0.7666667 25 3 0.7948233 171 12 0.705952 70 8 0.5592262 97 8 0.726299 239 12 0.791414 204 12 0.728677 308 12 0.861700 62 5 0.7029151 117 11 0.725103 211 12 0.714237 78 5 0.761574 81 8 0.6727561 193 12 0.830589 98 7 0.664484 62 6 0.662394 187 12 0.6487803 200 11 0.7688927 249 11 0.712262 399 12 0.5521641 149 11 0.5626086 157 12 0.6848725 205 12 0.885159 91 8 0.5502646 65 8 0.6311700 220 11 0.746261 263 12 0.7180125 284 12 0.7380592 320 12 0.7149887 295 12 0.7314865 285 12 0.8047647 0.6040679 0.671167 0.858539 0.707192 0.767618 0.734889 0.8114915 0.7453920 0.725238 0.728520 0.6974853 0.714112 0.7879425 0.8257751 0.7577657 0.6759549 0.7547622 0.8080100 0.7643171 0.781833 0.7504208 0.781144 0.8282490 0.8181424 0.7137293 0.8443094 0.7302125 0.7688584 0.694834 0.8205525 0.7579518 0.6580265 0.6294290 0.75211822 0.8555750 0.6638449 0.6758603 0.7921222 0.7955304 0.7835947 0.7906844 0.8002024 4 0.731836 0.751162 -0.00597642 12 0.754132 0.716560 3.7573e-02 0.64355729 0.69310925 insignificant 1.00000 1.000000 insignificant 0.92660125 0.28586135 insignificant 1.00000 1.000000 insignificant -0.02811079 0.27447269 insignificant 1.00000 insignificant 0.731533 0.6786922 0.0669137 12 0.729127 0.5924396 0.1366874 9.9509e-05 9.9737e-01 weaklyHypermeth 8.5784e-04 1.0000e+00 weaklyHypermeth 1.4457e-02 9.9879e-01 weaklyHypermeth 1.1850e-01 1.0000e+00 insignificant 0.0546566 3.6083e-01 insignificant 1.0000e+00 insignificant 0.731248 0.749827 -0.03216662 12 0.706554 0.731916 -0.0253618 9.9144e-01 1.1405e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8548e-01 1.1295e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0307319 8.3981e-02 insignificant 7.9982e-01 insignificant 0.750777 0.6786922 0.07310122 12 0.698594 0.5924396 1.0615e-01 8.6296e-07 9.9432e-01 weaklyHypermeth 1.0924e-05 1.0000e+00 weaklyHypermeth 2.3694e-03 9.9981e-01 weaklyHypermeth 2.4427e-02 1.0000e+00 weaklyHypermeth 0.0827674 1.8915e-01 insignificant 1.0000e+00 insignificant 0.751169 0.749827 -0.02542380 12 0.706811 0.731916 -0.02510548 9.5555e-01 4.2544e-02 weaklyHypometh 1.0000e+00 8.1816e-01 insignificant 9.0265e-01 2.4313e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0026211 8.9941e-01 insignificant 1.00000000 insignificant 0.6794582 0.749827 -0.0965055 12 0.6418095 0.731916 -0.09010644 9.9980e-01 1.7467e-07 weaklyHypometh 1.0000e+00 4.9904e-06 weaklyHypometh 9.9984e-01 6.6994e-04 weaklyHypometh 1.0000e+00 1.3672e-02 weaklyHypometh -0.0853884 1.6793e-01 insignificant 0.97632006 insignificant chr1 31061444 31062444 772 LAPTM5 ENSG00000162511 0.293333 111 5 0.2787879 58 5 0.258758 81 5 0.171523 257 5 0.211111 38 5 0.438186 278 5 0.4024129 138 5 0.298708 86 5 0.2888889 43 5 0.305994 120 5 0.578389 107 5 0.554365 39 5 0.110056 89 5 NA 0 0 0.2363636 51 5 0.678485 52 5 0.3020513 35 5 0.290589 144 5 0.200260 101 5 0.125058 237 5 0.386667 18 2 0.0832749 88 5 0.370714 69 5 0.244627 59 5 0.287386 105 5 0.2000000 103 5 0.421154 27 3 0.491667 27 3 0.146387 57 5 0.1360791 107 5 0.0933333 53 5 0.631333 127 5 0.0444444 40 5 0.1555556 54 5 0.2500000 137 4 0.020000 43 5 0.2011111 35 5 0.2106227 59 5 0.011111 158 5 0.1143860 79 5 0.0542529 143 5 0.1621538 116 5 0.1019549 141 5 0.3119518 0.3001396 0.288607 0.185036 0.238304 0.467316 0.435372 0.3006098 0.3061038 0.327605 0.603821 0.5788952 0.113251 NA 0.2625598 0.7003090 0.3089238 0.3168907 0.2052290 0.1390166 0.390351 0.0832564 0.398120 0.2604843 0.3076327 0.2195291 0.4240756 0.4989035 0.1593516 0.147245 0.1004386 0.6552882 0.0584795 0.1279240 0.16447368 0.0203947 0.2300804 0.1861143 0.0091374 0.1216990 0.0591349 0.1849696 0.1106126 3 0.307990 0.285714 0.01437482 5 0.298390 0.283174 1.5216e-02 0.48006932 0.71648564 insignificant 1.00000 1.000000 insignificant 0.12447623 0.96381400 insignificant 1.00000 1.000000 insignificant 0.02596501 0.67334200 lowCoverage 1.00000 lowCoverage 0.307990 0.1739130 0.1516669 5 0.298390 0.1718222 0.1265679 1.0929e-08 2.6698e-01 weaklyHypermeth 1.4971e-07 1.0000e+00 weaklyHypermeth 1.0509e-07 9.9890e-01 weaklyHypermeth 3.6237e-06 1.0000e+00 weaklyHypermeth 0.1700612 5.5242e-03 lowCoverage 8.0061e-02 lowCoverage 0.307990 0.084772 0.22410417 5 0.298390 0.081267 0.2171231 1.7437e-07 1.0000e+00 hypermethylated 1.3413e-05 1.0000e+00 hypermethylated 6.8423e-08 1.0000e+00 hypermethylated 2.2808e-05 1.0000e+00 hypermethylated 0.2282451 5.1617e-05 lowCoverage 1.0323e-02 lowCoverage 0.285714 0.1739130 0.14368077 5 0.283174 0.1718222 1.1135e-01 3.3449e-05 4.1558e-01 weaklyHypermeth 3.2474e-04 1.0000e+00 weaklyHypermeth 3.4816e-05 9.9877e-01 weaklyHypermeth 6.3301e-04 1.0000e+00 weaklyHypermeth 0.1440962 3.5960e-02 lowCoverage 3.2023e-01 lowCoverage 0.285714 0.084772 0.20259924 5 0.283174 0.081267 0.20190743 1.1287e-04 9.9995e-01 hypermethylated 4.7029e-03 1.0000e+00 hypermethylated 2.5275e-04 9.9025e-01 hypermethylated 2.4602e-02 1.0000e+00 hypermethylated 0.2022801 2.6335e-03 lowCoverage 0.14630629 lowCoverage 0.1739130 0.084772 0.0867939 5 0.1718222 0.081267 0.09055519 2.5504e-01 9.6503e-02 insignificant 1.0000e+00 4.9236e-01 insignificant 8.7982e-01 9.3729e-02 insignificant 1.0000e+00 5.8581e-01 insignificant 0.0581839 2.4316e-01 lowCoverage 1.00000000 lowCoverage chr1 31345544 31346544 787 SEPW1P ENSG00000215900 0.835026 695 9 0.7861154 901 9 0.780004 238 8 0.810289 526 9 0.892989 200 8 0.824089 973 8 0.9154226 404 9 0.916334 261 8 0.7512660 203 7 0.897041 172 6 0.790177 588 9 0.834530 80 6 0.775926 201 9 0.8830932 210 9 0.8709150 191 8 0.902778 101 6 0.9537893 1874 6 0.877441 593 9 0.800479 452 7 0.875577 816 7 0.776086 138 8 0.7777778 14 0 0.784598 439 8 0.945398 179 8 0.969751 118 6 0.9362655 898 10 0.800549 158 6 0.837289 132 6 0.904903 447 8 0.9254847 854 9 0.9002835 880 8 0.898527 880 7 0.9026946 436 7 0.9498339 289 7 0.7719605 546 8 0.733333 15 0 0.7582764 361 7 0.8521246 858 8 0.875517 913 9 0.9140302 836 9 0.8757480 632 9 0.9091962 605 8 0.9462031 530 8 0.9437232 0.9325263 0.941027 0.953999 0.944153 0.925035 0.908864 0.9669705 0.9347271 0.923010 0.913182 0.8874598 0.903632 0.8979403 0.9350737 0.9731969 0.9984839 0.9426402 0.9232984 0.9449389 0.927595 0.9220273 0.922657 0.9778093 0.9538696 0.9554062 0.8635308 0.9554031 0.9495804 0.959230 0.9364862 0.9516838 0.9570373 0.9625217 0.85090820 0.8916286 0.9112802 0.9581177 0.9542875 0.9468034 0.9631501 0.9503277 0.9643524 6 0.945242 0.947430 -0.00086241 8 0.844530 0.812065 3.2465e-02 0.58249966 0.57165571 insignificant 1.00000 1.000000 insignificant 0.97879422 0.20166716 insignificant 1.00000 1.000000 insignificant -0.02274534 0.36135813 insignificant 1.00000 insignificant 0.945242 0.9305389 0.0144969 7 0.844530 0.7986260 0.0459042 3.5431e-01 6.8511e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.0717e-01 2.1859e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0206268 6.0396e-01 insignificant 1.0000e+00 insignificant 0.945242 0.956769 -0.01515298 8 0.844530 0.895118 -0.0505883 9.9874e-01 5.2472e-02 insignificant 1.0000e+00 7.2878e-01 insignificant 9.9994e-01 1.9712e-02 weaklyHypometh 1.0000e+00 3.8651e-01 insignificant -0.0554748 1.0333e-02 weaklyHypometh 2.4031e-01 insignificant 0.947430 0.9305389 0.01567495 7 0.812065 0.7986260 1.3439e-02 4.5030e-01 4.1491e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.2257e-01 8.9892e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0433722 3.2096e-01 insignificant 1.0000e+00 insignificant 0.947430 0.956769 -0.01374317 8 0.812065 0.895118 -0.08305301 9.9737e-01 3.4737e-02 weaklyHypometh 1.0000e+00 7.3908e-01 insignificant 9.7072e-01 4.7334e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0327295 2.0298e-01 insignificant 1.00000000 insignificant 0.9305389 0.956769 -0.0285894 7 0.7986260 0.895118 -0.09649247 9.3797e-01 2.7399e-02 weaklyHypometh 1.0000e+00 1.6707e-01 insignificant 9.8918e-01 7.5716e-02 insignificant 1.0000e+00 4.8590e-01 insignificant -0.0761016 8.9359e-02 insignificant 0.59177901 insignificant chr1 31405744 31406744 790 ENSG00000218918 0.479933 73 5 0.5852336 97 4 0.312500 22 3 0.527476 62 4 0.539583 24 4 0.558776 87 4 0.3660714 34 4 0.772917 48 3 0.5416667 44 4 0.662500 17 1 0.690476 79 4 0.425000 17 1 0.506993 50 4 0.5924242 45 4 0.5500000 20 4 0.479167 18 1 0.5357143 18 1 0.642460 109 7 0.647619 41 4 0.655806 52 4 0.666667 12 0 NA 0 0 0.822704 42 4 0.333333 21 3 0.791667 8 0 0.5633715 128 6 0.825000 18 3 0.500000 4 0 0.557143 37 4 0.7442857 96 4 0.6832695 118 5 0.709019 64 5 0.5833333 33 4 0.7250000 19 3 0.4898932 94 4 0.500000 19 1 0.3875000 17 2 0.6703036 88 4 0.555337 59 5 0.6598281 92 5 0.6692392 61 5 0.4971989 31 1 0.5210424 69 5 0.5320988 0.5851254 0.328704 0.558642 0.506944 0.598765 0.351190 0.7893519 0.5370370 0.652778 0.679233 0.4166667 0.503497 0.5875421 0.5444444 0.5046296 0.4139752 0.7361111 0.6712963 0.5555556 0.582341 NA 0.861111 0.3518519 0.7685185 0.4975490 0.8055556 0.8236879 0.5523810 0.669444 0.6184547 0.6854257 0.5740741 0.7166667 0.43859649 0.4444444 0.4083333 0.5147059 0.5608466 0.6491228 0.5000000 0.3333333 0.6490300 0 0.572176 0.683729 -0.09029313 4 0.586932 0.730655 -1.4372e-01 0.99980888 0.05075978 lowCoverage 1.00000 0.957732 lowCoverage 0.99889320 0.03312162 lowCoverage 1.00000 0.816699 lowCoverage -0.10060775 0.07224324 lowCoverage 1.00000 lowCoverage 0.572176 0.6259259 -0.0398767 4 0.586932 0.5710654 0.0158664 4.0694e-01 3.1804e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 6.9486e-01 6.9225e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0057226 9.2230e-01 lowCoverage 1.0000e+00 lowCoverage 0.571728 0.589744 -0.01900396 5 0.541035 0.606944 -0.0659090 8.8362e-01 2.0976e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.6704e-01 6.8248e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0269132 5.5086e-01 lowCoverage 1.0000e+00 lowCoverage 0.683729 0.6259259 0.05945896 4 0.730655 0.5710654 1.5959e-01 1.7651e-02 9.3279e-01 lowCoverage 9.9163e-02 1.0000e+00 lowCoverage 3.7788e-01 9.9695e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0948852 1.9194e-01 lowCoverage 1.0000e+00 lowCoverage 0.683150 0.589744 0.07564472 4 0.700728 0.606944 0.09378343 3.8580e-02 8.6558e-01 lowCoverage 5.8303e-01 1.0000e+00 lowCoverage 3.0077e-02 9.7546e-01 lowCoverage 6.1382e-01 1.0000e+00 lowCoverage 0.0736945 2.2651e-01 lowCoverage 1.00000000 lowCoverage 0.6245353 0.589744 0.0309852 4 0.5234060 0.606944 -0.08353835 1.2158e-01 1.3632e-01 lowCoverage 1.0000e+00 6.5854e-01 lowCoverage 4.6752e-01 6.4938e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0211907 7.4164e-01 lowCoverage 1.00000000 lowCoverage chr1 31939744 31940744 798 PEF1 ENSG00000162517 0.964723 138 5 0.7579211 106 5 0.912641 80 5 0.910172 148 4 0.861319 60 5 0.959610 201 5 0.8577514 93 5 0.927145 100 5 0.9406863 75 5 0.933333 36 3 0.844815 210 5 0.979167 31 3 0.887281 45 2 0.9722222 24 2 0.9687500 67 5 0.813199 50 4 0.9500000 20 2 0.907163 174 4 0.909531 143 5 0.939442 147 5 0.846970 69 4 1.0000000 11 0 0.945668 86 5 0.800786 59 5 0.931818 37 4 0.8744997 144 5 0.805258 79 4 0.897619 44 4 0.971861 108 5 0.8965962 160 5 0.8369353 155 5 0.888039 169 5 0.1907633 139 5 0.0866162 114 5 0.1583333 118 3 0.000000 11 0 0.1816972 144 5 0.2287380 231 5 0.941860 182 4 0.9395604 109 4 0.9761218 145 4 0.9671364 98 4 0.9240015 104 4 0.9613974 0.7096774 0.901107 0.905149 0.881106 0.956991 0.853298 0.9120427 0.9262199 0.943182 0.817934 0.9292724 0.878962 0.9442364 0.9783381 0.8509581 0.9053789 0.8835107 0.8937806 0.9152915 0.827221 1.0000000 0.943506 0.8122436 0.9486509 0.8451763 0.8276768 0.7861201 0.9760183 0.880333 0.8480998 0.8836508 0.1677600 0.0696310 0.09223671 0.0467893 0.1523033 0.0880960 0.9267430 0.9273851 0.9805234 0.9492640 0.9004962 1 0.897844 0.887600 0.01117183 5 0.898901 0.887791 1.1109e-02 0.43612119 0.88010151 insignificant 1.00000 1.000000 insignificant 0.37739778 0.55547646 insignificant 1.00000 1.000000 insignificant 0.01850601 0.41713315 lowCoverage 1.00000 lowCoverage 0.897844 0.1364238 0.7583518 5 0.898901 0.1548120 0.7440887 6.5293e-65 1.0000e+00 hypermethylated 3.2646e-62 1.0000e+00 hypermethylated 2.6216e-13 1.0000e+00 hypermethylated 2.3833e-11 1.0000e+00 hypermethylated 0.7688189 3.0822e-07 lowCoverage 1.8131e-05 lowCoverage 0.897844 0.938871 -0.04401833 4 0.898901 0.950649 -0.0517485 9.9962e-01 8.1948e-03 lowCoverage 1.0000e+00 1.9987e-01 lowCoverage 9.9679e-01 4.3890e-02 lowCoverage 1.0000e+00 6.4393e-01 lowCoverage -0.0398924 2.3087e-02 lowCoverage 3.9806e-01 lowCoverage 0.887600 0.1364238 0.75262553 5 0.887791 0.1548120 7.3298e-01 8.3456e-44 1.0000e+00 hypermethylated 1.3909e-41 1.0000e+00 hypermethylated 1.7395e-11 1.0000e+00 hypermethylated 2.1744e-09 1.0000e+00 hypermethylated 0.7503129 5.5398e-08 lowCoverage 6.1553e-06 lowCoverage 0.887600 0.938871 -0.05359859 4 0.887791 0.950649 -0.06285789 9.9896e-01 4.7205e-03 lowCoverage 1.0000e+00 1.8156e-01 lowCoverage 9.7351e-01 3.8520e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0583984 1.2557e-02 lowCoverage 0.32059312 lowCoverage 0.1364238 0.938871 -0.8295016 4 0.1548120 0.950649 -0.79583717 1.0000e+00 9.8897e-32 lowCoverage 1.0000e+00 3.2966e-29 lowCoverage 1.0000e+00 4.9880e-08 lowCoverage 1.0000e+00 4.5345e-06 lowCoverage -0.8087114 7.0823e-07 lowCoverage 0.00070823 lowCoverage chr1 31953244 31954244 800 COL16A1 ENSG00000084636 0.222846 302 6 0.1233333 24 3 0.114796 36 5 0.201987 352 8 0.200000 41 5 0.161294 203 8 0.1000000 61 5 0.000000 34 2 0.2000000 11 0 0.400000 12 0 0.075000 53 5 0.000000 11 0 0.154762 13 2 0.0000000 11 0 0.0000000 25 2 0.200000 17 2 0.0000000 1 0 0.115983 597 4 0.073380 107 8 0.043072 148 4 0.083333 32 2 0.0000000 23 2 0.074482 96 6 0.166667 14 2 0.097703 199 5 0.1294180 94 6 0.441270 39 5 0.041667 12 0 0.080000 22 2 0.1828544 124 11 0.2186869 78 8 0.247215 209 8 0.0666667 61 5 0.0333333 41 5 0.0000000 134 3 0.023243 429 8 0.1584967 54 5 0.0142765 221 8 0.189133 390 8 0.1457523 236 6 0.0188679 242 6 0.1207495 462 6 0.2084397 259 8 0.0840598 0.1015152 0.073052 0.028409 0.090909 0.061237 0.045455 0.0000000 0.0909091 0.181818 0.034091 0.0000000 0.158517 0.0000000 0.0000000 0.0909091 NA 0.0344474 0.0370104 0.0075758 0.060606 0.0000000 0.050239 0.0909091 0.0562134 0.0714286 0.1770563 0.0909091 0.0909091 0.016940 0.1118457 0.0805785 0.0303030 0.0181818 0.01283422 0.0000000 0.0868984 0.0082645 0.0799801 0.0039526 0.0000000 0.0344249 0.0727581 0 0.168457 0.161325 -0.05105888 6 0.144995 0.216029 -7.1034e-02 0.99978920 0.28400302 insignificant 1.00000 1.000000 insignificant 0.99942940 0.61787303 insignificant 1.00000 1.000000 insignificant -0.02761863 0.50834607 lowCoverage 1.00000 lowCoverage 0.167969 0.0373533 0.1231244 6 0.109280 0.0680154 0.0412651 2.7924e-03 9.9997e-01 weaklyHypermeth 1.8251e-02 1.0000e+00 weaklyHypermeth 2.1024e-02 1.0000e+00 weaklyHypermeth 1.6056e-01 1.0000e+00 insignificant 0.0699866 5.0591e-02 lowCoverage 4.6517e-01 lowCoverage 0.168051 0.125865 0.04426614 6 0.101995 0.263968 -0.1619730 7.9898e-01 9.9905e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.2431e-01 9.9373e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0172659 6.8003e-01 lowCoverage 1.0000e+00 lowCoverage 0.160600 0.0373932 0.13073628 8 0.194185 0.0732474 1.2094e-01 5.5736e-04 1.0000e+00 weaklyHypermeth 4.2085e-03 1.0000e+00 weaklyHypermeth 1.6175e-02 1.0000e+00 weaklyHypermeth 1.1894e-01 1.0000e+00 insignificant 0.0976052 3.1615e-02 lowCoverage 2.8482e-01 lowCoverage 0.158969 0.124842 0.06629788 6 0.154811 0.163294 -0.00848218 8.8619e-02 9.9955e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.9803e-01 9.8395e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0103527 8.3137e-01 lowCoverage 1.00000000 lowCoverage 0.0353698 0.124842 -0.0714747 6 0.0237958 0.163294 -0.13949775 1.0000e+00 4.9978e-04 weaklyHypometh 1.0000e+00 5.8113e-03 weaklyHypometh 1.0000e+00 6.3505e-02 insignificant 1.0000e+00 4.2337e-01 insignificant -0.0872525 6.7137e-02 insignificant 0.50861441 insignificant chr1 31954444 31955444 801 COL16A1 ENSG00000084636 0.799910 301 7 0.6759986 123 7 0.742777 89 4 0.784921 95 7 0.789549 78 6 0.824475 263 7 0.8051892 108 7 0.700966 101 4 0.7686855 73 6 0.924945 118 7 0.764012 172 7 0.727056 99 7 0.752338 102 7 1.0000000 18 2 0.7729540 90 7 0.887523 67 7 0.7082058 440 7 0.827138 130 7 0.740070 106 7 0.882849 190 7 0.797619 29 2 0.9318681 50 6 0.841538 170 7 0.710714 40 4 0.883442 73 7 0.7833756 153 7 0.892410 54 5 0.980769 32 4 0.800000 84 7 0.8203401 163 7 0.7462250 148 7 0.802407 235 7 0.5733766 62 4 0.7321429 116 7 0.7417872 146 7 0.837780 80 6 0.7056832 61 4 0.7097989 140 7 0.825618 215 7 0.8525640 234 7 0.8240284 210 7 0.8261816 195 7 0.8586360 236 7 0.8081257 0.6553277 0.745072 0.746437 0.771795 0.802550 0.796521 0.7904022 0.8266624 0.906048 0.779895 0.7370523 0.793003 0.8792496 0.7964129 0.8732454 0.7548120 0.8111169 0.8338740 0.8694008 0.840488 0.9094017 0.871785 0.7291514 0.8647115 0.8322556 0.8620162 0.9525787 0.8500722 0.884844 0.7618537 0.8035415 0.6154270 0.6742003 0.76542185 0.8360067 0.6447419 0.7890759 0.8258561 0.8502879 0.8429539 0.8481974 0.8722788 4 0.808180 0.835906 -0.03576953 7 0.795267 0.821701 -2.6434e-02 0.94521016 0.00889424 weaklyHypometh 1.00000 0.461143 insignificant 0.99452928 0.00371045 weaklyHypometh 1.00000 0.337314 insignificant -0.03858093 0.19117093 insignificant 1.00000 insignificant 0.808180 0.7355372 0.0619255 7 0.795267 0.7414570 0.0538101 1.4514e-02 9.9528e-01 weaklyHypermeth 7.8455e-02 1.0000e+00 weaklyHypermeth 6.1547e-02 9.7417e-01 insignificant 3.7992e-01 1.0000e+00 insignificant 0.0772165 8.4369e-02 insignificant 6.4404e-01 insignificant 0.808180 0.852294 -0.04306971 7 0.795267 0.839737 -0.0444695 9.7596e-01 1.2103e-02 weaklyHypometh 1.0000e+00 2.4700e-01 insignificant 9.7323e-01 2.1055e-02 weaklyHypometh 1.0000e+00 4.0491e-01 insignificant -0.0434276 3.5511e-02 weaklyHypometh 5.2222e-01 insignificant 0.835906 0.7355372 0.09828157 7 0.821701 0.7414570 8.0244e-02 2.6514e-04 9.9744e-01 weaklyHypermeth 2.2095e-03 1.0000e+00 weaklyHypermeth 1.5261e-03 9.9533e-01 weaklyHypermeth 1.6957e-02 1.0000e+00 weaklyHypermeth 0.1157975 2.0086e-02 weaklyHypermeth 2.0496e-01 insignificant 0.835906 0.852294 -0.01369123 7 0.821701 0.839737 -0.01803578 9.3470e-01 3.3575e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.6834e-01 8.3523e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0048466 8.4047e-01 insignificant 1.00000000 insignificant 0.7355372 0.852294 -0.1113419 7 0.7414570 0.839737 -0.09827954 9.9903e-01 9.5416e-04 weaklyHypometh 1.0000e+00 9.8367e-03 weaklyHypometh 9.7128e-01 4.0024e-03 weaklyHypometh 1.0000e+00 5.5589e-02 weaklyHypometh -0.1206441 1.6908e-02 weaklyHypometh 0.19213639 insignificant chr1 32068644 32069644 807 SPOCD1 ENSG00000134668 0.878406 269 6 0.9039803 177 6 0.856737 146 5 0.906472 266 6 0.955135 110 5 0.867517 388 6 0.6781806 232 6 0.899954 232 5 0.7477323 162 5 0.985714 89 4 0.905621 203 6 0.877706 38 4 0.939103 76 4 0.9075630 65 4 0.8835979 71 4 0.544974 49 3 NA 0 0 1.000000 3 0 0.932922 275 5 0.842961 393 6 0.911358 76 4 0.9316239 67 4 0.775329 208 6 0.892857 33 2 1.000000 40 3 0.9584804 372 5 0.820080 118 4 0.983165 116 4 0.682145 275 5 0.9023105 438 6 0.9338176 469 6 0.884995 383 6 0.7568627 212 5 0.8472222 77 6 0.8619048 327 5 0.883242 73 4 0.8786967 220 5 0.8146473 422 6 0.947743 332 6 0.8180604 141 6 0.9507147 180 6 0.9657895 138 5 1.0000000 2 0 0.8800298 0.8931290 0.837015 0.903557 0.933654 0.851001 0.852250 0.8804264 0.8399470 0.962802 0.904060 0.9452287 0.951133 0.8969675 0.8830803 0.6220382 NA 0.9734179 0.9515598 0.8772241 0.863425 0.9345968 0.800281 0.9130435 1.0000000 0.9564019 0.8797320 0.9713805 0.9206183 0.928562 0.9545199 0.8967364 0.8307291 0.9594203 0.91994479 0.9398106 0.9534036 0.9325897 0.9412347 0.8479571 0.9694335 0.9884058 0.9503937 2 0.870838 0.914066 -0.04041452 5 0.721353 0.880048 -1.5869e-01 0.57160977 0.01881743 weaklyHypometh 1.00000 0.534171 insignificant 0.88335263 0.12093521 insignificant 1.00000 1.000000 insignificant -0.02050768 0.57519462 lowCoverage 1.00000 lowCoverage 0.871107 0.8827949 -0.0033115 6 0.824404 0.8471069 -0.0227031 1.1027e-02 2.5628e-02 weaklyHypometh 6.0921e-02 1.0000e+00 weaklyHypometh 2.4541e-01 2.1268e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 0.0287431 3.7395e-01 lowCoverage 1.0000e+00 lowCoverage 0.871336 0.925599 -0.05721105 6 0.878471 0.919003 -0.0405316 8.4861e-01 4.2632e-03 weaklyHypometh 1.0000e+00 1.3323e-01 insignificant 8.6943e-01 1.5874e-02 weaklyHypometh 1.0000e+00 3.3775e-01 insignificant -0.0672891 1.2166e-01 lowCoverage 1.0000e+00 lowCoverage 0.914032 0.8827949 0.02237312 5 0.862912 0.8471069 1.5805e-02 2.7401e-02 2.1061e-01 weaklyHypermeth 1.4421e-01 1.0000e+00 insignificant 2.0698e-01 3.4786e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0492508 1.5203e-01 lowCoverage 9.1583e-01 lowCoverage 0.914319 0.925599 -0.02081481 5 0.895620 0.919003 -0.02338290 9.3217e-01 1.0833e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.7355e-01 1.3199e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0467814 2.7666e-01 lowCoverage 1.00000000 lowCoverage 0.8826185 0.925599 -0.0624993 6 0.8216247 0.919003 -0.09737796 8.4864e-01 4.9668e-02 weaklyHypometh 1.0000e+00 2.7634e-01 insignificant 8.8277e-01 1.1025e-01 insignificant 1.0000e+00 6.6816e-01 insignificant -0.0960322 3.4745e-02 lowCoverage 0.31348354 lowCoverage chr1 32162844 32163844 811 ENSG00000212673 0.523562 70 6 0.5010870 89 4 0.406349 33 6 0.582660 62 6 0.586111 84 6 0.656044 55 4 0.4980159 56 6 0.789599 97 6 0.7871212 45 6 0.585049 86 6 0.646304 141 6 0.514423 36 2 0.649133 81 6 0.7619753 80 6 0.7576531 57 6 0.880952 18 2 0.6265512 76 2 0.537755 50 6 0.622449 62 4 0.728571 61 4 0.674603 33 4 0.9333333 11 1 0.654863 68 6 0.561224 57 4 0.636243 43 6 0.6431973 94 5 0.711111 47 5 0.430556 21 0 0.618056 64 6 0.6629073 87 5 0.4690267 83 4 0.562121 47 4 0.5989177 100 6 0.5648148 50 6 0.6508782 164 6 NA 0 0 0.4480626 78 5 0.5795455 88 4 0.600000 50 6 0.6527778 53 4 0.6889881 76 6 0.5510462 51 6 0.6013072 75 4 0.4634116 0.5242614 0.331868 0.477564 0.476603 0.614962 0.426511 0.7471660 0.6181818 0.646683 0.525892 0.2041420 0.509805 0.5717949 0.6195055 0.9862637 0.5549451 0.3975275 0.5219780 0.5793956 0.565934 NA 0.621584 0.4915293 0.5250305 0.6688187 0.6352564 0.2243590 0.5435363 0.549595 0.5119216 0.5104895 0.5421412 0.4529915 0.51753083 NA 0.4903487 0.6092310 0.4653846 0.5352564 0.6476648 0.4507784 0.5407240 0 0.633782 0.582569 0.00013576 5 0.710057 0.699326 1.0731e-02 0.81100540 0.95358857 insignificant 1.00000 1.000000 insignificant 0.94976711 0.79362167 insignificant 1.00000 1.000000 insignificant 0.00229809 0.96031634 lowCoverage 1.00000 lowCoverage 0.632408 0.5333333 0.0214182 5 0.673814 0.4854744 0.1883398 1.4016e-01 8.7397e-01 insignificant 6.2016e-01 1.0000e+00 insignificant 5.5252e-01 8.3098e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0636245 1.7034e-01 lowCoverage 1.0000e+00 lowCoverage 0.631579 0.570492 0.00221460 6 0.620641 0.624360 -0.0037189 7.2548e-01 5.3372e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.4116e-01 3.6516e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0132444 7.1899e-01 insignificant 1.0000e+00 insignificant 0.580645 0.5344468 0.01888358 5 0.613420 0.5548279 5.8592e-02 2.9958e-01 8.2896e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.9463e-01 8.6948e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0613264 2.3894e-01 lowCoverage 1.0000e+00 lowCoverage 0.580745 0.570492 0.00396535 5 0.620418 0.624360 -0.00394178 7.4397e-01 4.7774e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.9965e-01 6.4982e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0109463 8.0576e-01 lowCoverage 1.00000000 lowCoverage 0.5368421 0.570492 -0.0094269 5 0.6056325 0.624360 -0.01872746 6.5160e-01 3.2247e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.2393e-01 3.8714e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0503801 2.5807e-01 lowCoverage 1.00000000 lowCoverage chr1 32163344 32164344 812 ENSG00000212673 0.626860 175 10 0.5951894 213 7 0.540885 104 11 0.714584 151 8 0.681974 160 11 0.740395 94 7 0.6113180 194 11 0.785036 174 11 0.8168599 114 10 0.694188 124 10 0.737228 343 11 0.624260 63 5 0.723747 156 10 0.7711111 113 8 0.8077050 107 10 0.807792 38 4 0.6674363 153 5 0.646050 236 8 0.611760 95 7 0.777565 100 6 0.718198 71 7 0.9074074 22 1 0.745783 144 10 0.668803 113 8 0.690017 96 8 0.7387698 190 10 0.710637 95 9 0.638112 56 3 0.645353 156 9 0.7487049 156 10 0.6371773 148 9 0.676758 105 7 0.7051236 173 9 0.6470760 101 9 0.6819783 209 9 0.793651 13 1 0.5184467 188 9 0.7152986 149 9 0.681483 183 10 0.6763792 158 7 0.6905810 161 8 0.6780001 134 9 0.7052881 180 8 0.6421667 0.6764870 0.549236 0.660696 0.652839 0.761339 0.598918 0.7803931 0.7452786 0.702482 0.702152 0.4480926 0.720002 0.6306233 0.7578397 0.7909408 0.7315111 0.6095232 0.6679184 0.6998995 0.766461 0.8061089 0.743983 0.7519904 0.5874482 0.7743902 0.6521122 0.6627059 0.6764754 0.724972 0.7117764 0.6551985 0.6771575 0.4945895 0.64747054 0.7425081 0.6256456 0.6944264 0.6690045 0.7016538 0.7262581 0.6888762 0.6701348 1 0.705437 0.695781 -0.00341168 10 0.736775 0.732910 3.8648e-03 0.88230738 0.84562813 insignificant 1.00000 1.000000 insignificant 0.92690202 0.43421523 insignificant 1.00000 1.000000 insignificant -0.01137949 0.68914033 insignificant 1.00000 insignificant 0.704929 0.6266507 0.0246734 9 0.716526 0.6046955 0.1118310 1.3991e-01 4.8184e-01 insignificant 6.2016e-01 1.0000e+00 insignificant 6.8670e-01 7.0128e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0221682 6.0937e-01 insignificant 1.0000e+00 insignificant 0.705106 0.685049 -0.01264756 10 0.695289 0.718103 -0.0228143 9.6206e-01 2.1738e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7198e-01 2.5728e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0127510 5.0920e-01 insignificant 1.0000e+00 insignificant 0.695104 0.6274038 0.02544483 9 0.688395 0.6550868 3.3308e-02 2.9933e-01 5.6026e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.3172e-01 7.4016e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0335477 4.5748e-01 insignificant 1.0000e+00 insignificant 0.695749 0.685049 -0.00787164 9 0.699028 0.718103 -0.01907510 9.4992e-01 2.4398e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.7549e-01 6.4013e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0241305 2.9506e-01 insignificant 1.00000000 insignificant 0.6292271 0.685049 -0.0368849 9 0.6919129 0.718103 -0.02619023 8.8312e-01 3.4556e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.2033e-01 5.3531e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0094173 8.1261e-01 insignificant 1.00000000 insignificant chr1 32167744 32168744 813 ENSG00000212673 0.846935 338 11 0.7352609 196 11 0.704291 135 11 0.873095 208 10 0.708018 97 11 0.822922 323 10 0.6738178 126 7 0.680068 166 11 0.7536630 137 11 0.819662 123 9 0.813399 260 11 0.717293 95 9 0.763791 174 11 0.8416667 43 5 0.8206881 197 11 0.659780 62 7 0.6346681 71 6 0.710070 198 10 0.811746 214 11 0.888674 313 11 0.842172 48 5 0.8243390 113 10 0.752627 167 11 0.770866 95 9 0.750536 77 10 0.6761152 205 10 0.832440 110 9 0.944444 38 2 0.655534 124 9 0.7774737 215 10 0.7722978 190 10 0.733029 380 10 0.8372388 136 9 0.7298852 134 11 0.6729057 277 12 0.811438 81 5 0.6544733 67 5 0.8127563 174 10 0.824773 272 10 0.8867804 338 10 0.8006131 255 10 0.8316731 274 10 0.8811003 332 10 0.8255298 0.7173608 0.680389 0.850802 0.715998 0.873533 0.707103 0.8253114 0.8468116 0.765606 0.846618 0.7474704 0.874551 0.8384484 0.7832180 0.6614873 0.6371481 0.8235193 0.8066457 0.8698699 0.833739 0.8265148 0.756082 0.7943396 0.7755409 0.8012114 0.8175834 0.9297311 0.8328962 0.831144 0.7382842 0.8126803 0.7637033 0.6824441 0.72387786 0.8006565 0.5845293 0.7841000 0.8675875 0.8738963 0.8351972 0.8540085 0.8886898 5 0.811565 0.801930 0.00458088 10 0.783962 0.703952 8.0010e-02 0.33995705 0.72223767 insignificant 1.00000 1.000000 insignificant 0.65611529 0.15829955 insignificant 1.00000 1.000000 insignificant -0.01368058 0.63082899 insignificant 1.00000 insignificant 0.811523 0.7790564 0.0458340 11 0.784796 0.7590057 0.0257904 1.3348e-02 8.9598e-01 weaklyHypermeth 7.2698e-02 1.0000e+00 weaklyHypermeth 1.1035e-01 6.5281e-01 insignificant 5.9972e-01 1.0000e+00 insignificant 0.0108593 7.7216e-01 insignificant 1.0000e+00 insignificant 0.812100 0.853841 -0.04783129 10 0.800181 0.875097 -0.0749160 9.9995e-01 8.8363e-03 weaklyHypometh 1.0000e+00 2.0545e-01 insignificant 1.0000e+00 3.1225e-03 weaklyHypometh 1.0000e+00 1.2010e-01 insignificant -0.0810124 4.5843e-03 weaklyHypometh 1.2734e-01 insignificant 0.803531 0.7790564 0.04782108 10 0.766707 0.7590057 7.7010e-03 1.7585e-02 9.4303e-01 weaklyHypermeth 9.9163e-02 1.0000e+00 weaklyHypermeth 7.3690e-03 9.6104e-01 weaklyHypermeth 6.5794e-02 1.0000e+00 weaklyHypermeth 0.0245399 5.4363e-01 insignificant 1.0000e+00 insignificant 0.802857 0.853841 -0.05219917 10 0.766707 0.875097 -0.10839004 9.9956e-01 9.6527e-04 weaklyHypometh 1.0000e+00 5.6781e-02 weaklyHypometh 9.9387e-01 1.9600e-02 weaklyHypometh 1.0000e+00 7.3333e-01 insignificant -0.0673318 2.9741e-02 weaklyHypometh 0.53108120 insignificant 0.7771295 0.853741 -0.0983691 10 0.7458673 0.864688 -0.11882087 9.9984e-01 6.7300e-04 weaklyHypometh 1.0000e+00 7.4777e-03 weaklyHypometh 9.9928e-01 4.4132e-04 weaklyHypometh 1.0000e+00 1.0030e-02 weaklyHypometh -0.0918717 3.6697e-02 weaklyHypometh 0.31635605 insignificant chr1 32182344 32183344 814 PTP4A2 ENSG00000184007 0.055031 1040 23 0.0057546 891 23 0.060157 1001 23 0.010547 791 23 0.014067 680 23 0.056174 1014 23 0.0169161 1118 23 0.011266 777 23 0.0508101 910 23 0.013510 868 23 0.067490 1048 23 0.013256 1122 23 0.016136 725 23 0.0055096 143 5 0.0054149 1093 23 0.018926 894 23 0.0127911 1016 21 0.012406 876 23 0.014452 701 23 0.038979 1088 23 0.063619 251 18 0.0540323 343 22 0.064377 815 23 0.024306 270 17 0.050723 558 14 0.0159683 1065 23 0.028684 577 20 0.071873 296 19 0.020751 592 23 0.0135218 1241 23 0.0543659 1025 23 0.060694 1345 23 0.0131845 687 23 0.0499339 599 23 0.0150794 210 11 0.041865 314 19 0.0424190 426 22 0.0147729 920 23 0.076887 1135 23 0.0468632 1221 23 0.0168256 843 23 0.0503749 959 23 0.0630510 1087 23 0.0102111 0.0039977 0.015137 0.010293 0.010428 0.012060 0.012233 0.0060652 0.0058499 0.010623 0.021632 0.0094507 0.014889 0.0098633 0.0046172 0.0139545 0.0126601 0.0093966 0.0157241 0.0141058 0.012161 0.0132875 0.026957 0.0088087 0.0059912 0.0100484 0.0126602 0.0162023 0.0192570 0.011516 0.0081428 0.0159149 0.0072687 0.0126838 0.01674505 0.0163921 0.0241570 0.0217452 0.0381116 0.0266400 0.0131068 0.0042978 0.0558810 20 0.014280 0.015409 -0.00144651 23 0.028047 0.052100 -2.4053e-02 0.55109600 0.34334830 insignificant 1.00000 1.000000 insignificant 0.25367660 0.92630011 insignificant 1.00000 1.000000 insignificant -0.01859651 0.02442486 weaklyHypometh 1.00000 insignificant 0.014278 0.0148923 -0.0019834 23 0.027008 0.0305962 -0.0035880 8.0611e-01 5.6484e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.1681e-01 9.0528e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0045628 5.9593e-01 insignificant 1.0000e+00 insignificant 0.014282 0.045567 -0.02358902 23 0.030384 0.061270 -0.0308858 1.0000e+00 3.3541e-18 weaklyHypometh 1.0000e+00 1.6771e-15 weaklyHypometh 1.0000e+00 6.7143e-10 weaklyHypometh 1.0000e+00 3.3571e-07 weaklyHypometh -0.0258206 5.8802e-02 insignificant 6.6070e-01 insignificant 0.015409 0.0148970 -0.00060315 23 0.052100 0.0317730 2.0327e-02 4.3160e-01 6.8993e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.4319e-01 8.0933e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0140337 1.5368e-01 insignificant 9.2024e-01 insignificant 0.015295 0.045567 -0.02034347 23 0.035608 0.061270 -0.02566211 9.9995e-01 7.0729e-14 weaklyHypometh 1.0000e+00 3.5365e-11 weaklyHypometh 1.0000e+00 3.7723e-09 weaklyHypometh 1.0000e+00 1.8861e-06 weaklyHypometh -0.0072241 5.5718e-01 insignificant 1.00000000 insignificant 0.0149064 0.045567 -0.0187602 23 0.0344207 0.061270 -0.02684923 9.9986e-01 4.5481e-05 weaklyHypometh 1.0000e+00 6.8911e-04 weaklyHypometh 1.0000e+00 3.4837e-04 weaklyHypometh 1.0000e+00 8.7094e-03 weaklyHypometh -0.0212578 1.2149e-01 insignificant 0.74627524 insignificant chr1 32247044 32248044 819 PTP4A2 ENSG00000184007 0.742007 147 5 0.8095423 108 5 0.683081 66 5 0.767396 154 5 0.748626 48 5 0.704720 357 9 0.6984127 28 2 0.715184 108 7 0.6778519 65 5 0.748489 60 7 0.766254 258 7 0.759259 23 1 0.687220 95 7 0.9333333 18 1 0.6836981 72 7 0.800000 15 0 0.8333333 6 0 0.704323 144 7 0.693037 78 6 0.794531 375 9 0.646939 39 4 0.8068376 101 7 0.724293 77 5 0.710317 69 3 0.709308 50 4 0.7853968 180 7 0.835673 80 2 0.600000 16 1 0.671429 76 5 0.7194498 206 7 0.8984931 205 5 0.889529 309 7 0.5225936 109 7 0.6475296 87 5 0.5701681 129 7 0.958333 9 1 0.4541446 103 5 0.7685514 120 7 0.757166 130 5 0.8593235 170 5 0.7393707 167 5 0.8727273 67 5 0.7842911 134 5 0.8660504 0.7903363 0.697727 0.894335 0.702941 0.843576 0.762092 0.8118407 0.7081933 0.877116 0.848180 0.7522876 0.861560 0.9764706 0.8249361 0.7529412 0.7720946 0.8144172 0.7869323 0.9062119 0.678487 0.8717647 0.742123 0.8794118 0.7496440 0.8582785 0.9280453 0.8000000 0.7521008 0.798783 0.8913134 0.8764537 0.7914092 0.7272676 0.85788927 0.9129434 0.7274510 0.8625864 0.8081868 0.9083938 0.8760854 0.8959358 0.8945625 2 0.800000 0.828835 -0.00736036 5 0.733967 0.766313 -3.2346e-02 0.89008538 0.07635357 insignificant 1.00000 1.000000 insignificant 0.82512739 0.16284602 insignificant 1.00000 1.000000 insignificant -0.00229044 0.94145836 lowCoverage 1.00000 lowCoverage 0.800000 0.7486535 0.0538700 5 0.733967 0.5653898 0.1685767 1.0881e-05 9.0246e-01 weaklyHypermeth 1.0881e-04 1.0000e+00 weaklyHypermeth 1.0848e-02 9.0527e-01 weaklyHypermeth 1.0036e-01 1.0000e+00 insignificant 0.0939615 2.7124e-01 insignificant 1.0000e+00 insignificant 0.800000 0.851796 -0.03433294 5 0.733967 0.760121 -0.0261550 8.4227e-01 2.2757e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.5677e-01 2.7865e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0550608 1.1783e-01 insignificant 1.0000e+00 insignificant 0.828835 0.7486535 0.07600246 5 0.766313 0.5653898 2.0092e-01 1.3238e-06 9.8705e-01 weaklyHypermeth 1.5949e-05 1.0000e+00 weaklyHypermeth 1.2525e-02 9.8637e-01 weaklyHypermeth 9.8624e-02 1.0000e+00 weaklyHypermeth 0.0962520 2.7211e-01 lowCoverage 1.0000e+00 lowCoverage 0.828835 0.851796 -0.03015370 5 0.766313 0.760121 0.00619107 8.5025e-01 2.0975e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.2127e-01 2.9678e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0527703 1.9352e-01 lowCoverage 1.00000000 lowCoverage 0.7486535 0.851796 -0.0775011 5 0.5653898 0.760121 -0.19473164 9.9870e-01 4.2581e-03 weaklyHypometh 1.0000e+00 3.4619e-02 weaklyHypometh 9.9791e-01 7.6656e-02 insignificant 1.0000e+00 4.8825e-01 insignificant -0.1490223 1.0980e-01 insignificant 0.69494354 insignificant chr1 32260344 32261344 820 KHDRBS1 ENSG00000121774 0.778746 119 7 0.5834898 141 9 0.667143 63 9 0.773991 158 9 0.624286 76 9 0.664754 162 10 0.6963636 89 10 0.666740 132 10 0.5388095 67 9 0.704167 43 5 0.762422 216 10 0.550000 19 0 0.620000 64 9 0.7386364 72 7 0.7277778 41 6 0.650000 20 0 NA 0 0 0.792735 116 8 0.746542 76 7 0.649239 82 10 0.712302 42 2 0.6888889 39 7 0.782843 90 10 0.570767 34 3 0.697184 81 5 0.7579545 134 10 0.719881 54 6 0.866667 15 0 0.693125 83 7 0.6485676 152 9 0.7370766 122 8 0.724109 153 10 0.6758445 118 9 0.7021212 90 9 0.6834279 122 9 0.641667 35 3 0.5494987 77 7 0.6955181 138 10 0.726684 127 10 0.6707049 153 10 0.7525866 134 9 0.7357143 34 6 0.7522827 177 10 0.7559063 0.5845007 0.631229 0.755571 0.581395 0.654863 0.705074 0.6365856 0.5156423 0.702132 0.772534 0.5465116 0.592525 0.6939599 0.7170543 0.6976744 NA 0.8173822 0.7367520 0.6413030 0.645903 0.6697797 0.762581 0.5798726 0.8065682 0.7152484 0.7171927 0.8139535 0.6353658 0.622821 0.6675787 0.7285907 0.6102619 0.6624736 0.66706444 0.6114341 0.6040232 0.6547813 0.7106996 0.6822947 0.7217018 0.7648820 0.7715074 0 0.685600 0.704112 -0.00915850 9 0.748838 0.757720 -8.8825e-03 0.93261284 0.78276662 insignificant 1.00000 1.000000 insignificant 0.81615234 0.44857490 insignificant 1.00000 1.000000 insignificant -0.03577994 0.19900088 insignificant 1.00000 insignificant 0.684695 0.6321244 0.0566089 9 0.698605 0.6568154 0.0417900 2.2865e-03 9.2233e-01 weaklyHypermeth 1.5243e-02 1.0000e+00 weaklyHypermeth 6.7464e-02 7.6771e-01 insignificant 3.9685e-01 1.0000e+00 insignificant 0.0228209 4.5013e-01 insignificant 1.0000e+00 insignificant 0.684876 0.737600 -0.02867855 8 0.726005 0.750468 -0.0244633 8.9030e-01 3.4500e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.5436e-01 5.6578e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0467608 5.9963e-02 insignificant 6.6610e-01 insignificant 0.702811 0.6327586 0.06440702 9 0.690240 0.6880140 2.2263e-03 1.4805e-02 8.4349e-01 weaklyHypermeth 8.5084e-02 1.0000e+00 weaklyHypermeth 6.1258e-02 9.2612e-01 insignificant 3.5409e-01 1.0000e+00 insignificant 0.0586008 8.4147e-02 insignificant 6.1176e-01 insignificant 0.703219 0.737179 -0.02106954 9 0.709264 0.725515 -0.01625069 7.5707e-01 4.0117e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.4951e-01 6.2768e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0109809 6.7453e-01 insignificant 1.00000000 insignificant 0.6321244 0.737179 -0.0912635 8 0.6568154 0.725515 -0.06869960 5.3507e-01 1.4971e-03 weaklyHypometh 1.0000e+00 1.4677e-02 weaklyHypometh 7.1242e-01 2.7814e-02 weaklyHypometh 1.0000e+00 2.4398e-01 insignificant -0.0695817 3.5890e-02 weaklyHypometh 0.31482060 insignificant chr1 32260644 32261644 821 KHDRBS1 ENSG00000121774 0.731542 108 7 0.6731318 129 7 0.626531 45 7 0.710350 101 6 0.520408 48 6 0.629240 126 7 0.6233766 48 7 0.625956 97 7 0.4482993 51 7 0.625000 36 5 0.723551 160 7 0.357143 10 0 0.571429 53 7 0.7916667 66 7 0.7928571 37 6 0.500000 8 0 NA 0 0 0.855769 91 5 0.673631 65 7 0.530659 60 7 0.703704 26 0 0.5333333 22 4 0.725490 68 7 0.543367 28 3 0.608964 49 2 0.7435065 96 7 0.672619 36 3 1.000000 8 0 0.661380 76 7 0.5940576 128 7 0.7426471 102 6 0.660473 86 7 0.6687888 88 7 0.6610390 62 6 0.6233844 85 7 0.488095 20 0 0.5494987 77 7 0.6294143 104 7 0.665179 82 7 0.5885771 108 7 0.7234754 100 6 0.7357143 34 6 0.6900576 120 7 0.7334657 0.6350066 0.630952 0.649652 0.500000 0.644590 0.663939 0.6338679 0.4432540 0.634167 0.726722 0.3500000 0.589286 0.7446759 0.7777778 0.5666667 NA 0.8299145 0.6851779 0.5414232 0.655556 0.5266842 0.713866 0.5422619 0.7454750 0.7356061 0.6625000 1.0000000 0.6440243 0.609377 0.6985294 0.6819799 0.6465036 0.6495455 0.61985119 0.4430556 0.5367168 0.5910839 0.6402381 0.6022817 0.7357212 0.7383333 0.7266606 0 0.645740 0.666667 -0.01612028 7 0.721406 0.736332 -1.4926e-02 0.94539777 0.68893731 insignificant 1.00000 1.000000 insignificant 0.90133602 0.25260363 insignificant 1.00000 1.000000 insignificant -0.05032809 0.28150210 lowCoverage 1.00000 lowCoverage 0.644411 0.5862069 0.0636474 7 0.641808 0.5896394 0.0521681 6.3789e-04 9.7037e-01 weaklyHypermeth 4.7604e-03 1.0000e+00 weaklyHypermeth 2.2271e-02 8.2508e-01 weaklyHypermeth 1.6497e-01 1.0000e+00 insignificant 0.0287635 4.9002e-01 insignificant 1.0000e+00 insignificant 0.644678 0.684685 -0.02313382 6 0.686582 0.705665 -0.0190837 8.3010e-01 3.4462e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6259e-01 4.8177e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0484669 2.3175e-01 insignificant 1.0000e+00 insignificant 0.664820 0.5871560 0.07918089 7 0.640874 0.6409345 -6.0794e-05 5.7334e-03 9.6217e-01 weaklyHypermeth 3.5736e-02 1.0000e+00 weaklyHypermeth 1.7118e-02 9.8963e-01 weaklyHypermeth 1.2495e-01 1.0000e+00 insignificant 0.0790916 1.0343e-01 lowCoverage 6.9414e-01 lowCoverage 0.665278 0.683973 -0.00589256 6 0.660999 0.663617 -0.00261892 6.0279e-01 4.8930e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.2473e-01 7.7987e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0018611 9.6690e-01 lowCoverage 1.00000000 lowCoverage 0.5862069 0.683973 -0.0923520 6 0.5896394 0.663617 -0.07397801 8.8007e-01 1.6347e-03 weaklyHypometh 1.0000e+00 1.5718e-02 weaklyHypometh 9.4035e-01 1.7130e-02 weaklyHypometh 1.0000e+00 1.7303e-01 insignificant -0.0772305 7.8347e-02 insignificant 0.55330936 insignificant chr1 32932544 32933544 836 SYNC ENSG00000162520 0.796712 497 10 0.6257708 567 14 0.606332 146 7 0.774617 512 10 0.769464 106 7 0.818503 614 10 0.7985746 173 12 0.760518 228 10 0.7421194 132 9 0.834781 129 6 0.822195 455 10 0.709524 22 2 0.761329 204 9 0.8165278 86 8 0.7774402 153 9 0.506667 24 2 0.6333333 14 1 0.600065 565 10 0.852186 390 10 0.750789 604 10 0.790656 122 10 0.8419777 145 5 0.763290 263 10 0.826457 158 10 0.853831 135 6 0.7634772 420 10 0.772894 221 7 0.897063 88 6 0.818032 402 10 0.7804205 396 10 0.8092533 454 10 0.801091 564 10 0.4624818 325 10 0.4288651 266 10 0.4558405 363 9 0.337662 33 2 0.4979954 336 10 0.5384969 411 10 0.704910 331 10 0.8542608 528 14 0.8099107 384 10 0.7591347 417 9 0.7904271 404 10 0.8682339 0.8289182 0.753285 0.853606 0.850335 0.893857 0.819457 0.8464177 0.8377743 0.852583 0.854144 0.8063329 0.832644 0.8647543 0.8732558 0.6838462 0.8357545 0.7885266 0.8702425 0.8448329 0.868707 0.8590503 0.856058 0.8808861 0.8693818 0.8374101 0.8593980 0.8475844 0.8890883 0.883886 0.8686312 0.8799144 0.3467601 0.1958747 0.30982906 0.2828651 0.3758255 0.2090272 0.8419538 0.8791801 0.8438784 0.8262547 0.8409175 3 0.855576 0.861474 -0.01539960 10 0.707027 0.819298 -1.1227e-01 0.94824960 0.02005926 weaklyHypometh 1.00000 0.534171 insignificant 0.98646054 0.01488311 weaklyHypometh 1.00000 0.627168 insignificant -0.07199793 0.00575632 weaklyHypometh 1.00000 insignificant 0.855300 0.3310265 0.5750264 10 0.693037 0.4548753 0.2381619 5.4968e-48 9.8577e-01 hypermethylated 6.1076e-46 1.0000e+00 hypermethylated 1.4516e-07 9.2700e-01 hypermethylated 4.7684e-06 1.0000e+00 hypermethylated 0.2843154 4.5052e-06 hypermethylated 2.0459e-04 hypermethylated 0.856252 0.860882 0.00184198 10 0.795534 0.817591 -0.0220569 4.2563e-01 1.4285e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.7054e-01 4.8447e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0458563 1.8962e-01 insignificant 1.0000e+00 insignificant 0.861433 0.3310265 0.56147083 10 0.805398 0.4548753 3.5052e-01 9.6955e-35 9.9995e-01 hypermethylated 8.8141e-33 1.0000e+00 hypermethylated 3.1838e-07 9.9931e-01 hypermethylated 1.1371e-05 1.0000e+00 hypermethylated 0.3563133 8.8875e-06 hypermethylated 3.8641e-04 hypermethylated 0.861864 0.860606 0.01750673 10 0.822514 0.740514 0.08199972 1.4703e-01 5.5980e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.7613e-02 8.8930e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0261416 3.8121e-01 insignificant 1.00000000 insignificant 0.3302487 0.860727 -0.5769083 10 0.4413379 0.800156 -0.35881772 1.0000e+00 5.1373e-20 hypomethylated 1.0000e+00 7.3390e-18 hypomethylated 9.9594e-01 6.8989e-07 hypomethylated 1.0000e+00 4.9278e-05 hypomethylated -0.3301717 1.0128e-05 hypomethylated 0.00194956 hypomethylated chr1 32972744 32973744 840 SYNC ENSG00000162520 0.721811 456 9 0.7832969 333 11 0.709875 233 12 0.834158 321 10 0.835870 208 11 0.757417 655 13 0.7670228 214 10 0.847869 318 12 0.8767157 275 13 0.789198 215 11 0.882852 476 13 0.729805 167 11 0.897378 344 13 0.8699634 72 4 0.8851688 271 13 0.825323 128 8 0.7687705 714 10 0.788913 384 11 0.896778 387 12 0.815771 621 13 0.714271 163 12 0.8166536 196 13 0.871434 312 12 0.817548 267 13 0.745568 136 10 0.8381084 328 10 0.766437 243 12 0.767504 159 9 0.774213 302 11 0.8816924 415 12 0.8192111 343 12 0.776457 637 13 0.7123483 273 11 0.7185601 207 12 0.7590550 292 11 0.818182 93 7 0.7111383 414 13 0.6918055 392 13 0.926369 481 10 0.8509243 379 12 0.8851156 304 10 0.7817218 387 11 0.7357309 324 9 0.8880996 0.8104420 0.794546 0.908935 0.916529 0.904461 0.869790 0.8884816 0.8692035 0.858986 0.897512 0.8464092 0.903780 0.8547256 0.8936221 0.7905114 0.8520560 0.8797129 0.9015953 0.9246671 0.866689 0.8174652 0.883209 0.8895052 0.8828742 0.8602175 0.8344984 0.8783490 0.8443604 0.880548 0.8836600 0.9183186 0.7625451 0.7263682 0.82814343 0.9096105 0.8457510 0.8400084 0.9265695 0.9213455 0.9286010 0.8974394 0.8824033 8 0.891932 0.867181 0.00980192 13 0.804359 0.800439 3.9202e-03 0.11261307 0.46002497 insignificant 1.00000 1.000000 insignificant 0.14873275 0.33759355 insignificant 1.00000 1.000000 insignificant 0.01510637 0.45252217 insignificant 1.00000 insignificant 0.891852 0.7947337 0.0643273 13 0.779904 0.6787292 0.1011744 3.1167e-06 9.9429e-01 weaklyHypermeth 3.3877e-05 1.0000e+00 weaklyHypermeth 1.2294e-02 9.6486e-01 weaklyHypermeth 1.0724e-01 1.0000e+00 insignificant 0.0790164 6.1524e-03 weaklyHypermeth 8.3140e-02 weaklyHypermeth 0.892657 0.904000 -0.01907662 10 0.858029 0.832000 0.0260281 9.5237e-01 1.6621e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8763e-01 9.8934e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0217744 5.8077e-01 insignificant 1.0000e+00 insignificant 0.867373 0.7947337 0.06563638 13 0.793351 0.6787292 1.1462e-01 2.0387e-03 1.0000e+00 weaklyHypermeth 1.4060e-02 1.0000e+00 weaklyHypermeth 3.9182e-02 9.9986e-01 weaklyHypermeth 2.4479e-01 1.0000e+00 insignificant 0.0639100 2.1502e-02 weaklyHypermeth 2.1719e-01 insignificant 0.868022 0.904000 -0.03029548 10 0.842160 0.832000 0.01015961 9.9984e-01 1.0143e-02 weaklyHypometh 1.0000e+00 3.0736e-01 insignificant 9.9761e-01 3.0997e-02 weaklyHypometh 1.0000e+00 9.6866e-01 insignificant -0.0368807 3.6598e-01 insignificant 1.00000000 insignificant 0.7961631 0.903897 -0.0795411 10 0.7756905 0.808001 -0.03231004 1.0000e+00 2.2494e-04 weaklyHypometh 1.0000e+00 2.8473e-03 weaklyHypometh 9.9834e-01 1.6562e-02 weaklyHypometh 1.0000e+00 1.6900e-01 insignificant -0.1007908 4.0933e-02 weaklyHypometh 0.33829170 insignificant chr1 32998444 32999444 842 KIAA1522 ENSG00000162522 0.522530 208 7 0.2250208 222 7 0.483654 227 7 0.503528 202 7 0.395426 148 7 0.554999 462 7 0.3739910 205 7 0.503406 228 7 0.4710450 222 7 0.503676 194 7 0.413203 328 7 0.390152 147 7 0.649921 163 7 0.5215098 161 7 0.6162991 220 7 0.309268 197 7 0.5250000 31 3 0.531796 184 7 0.487362 210 6 0.595415 266 7 0.353081 98 6 0.5992793 86 3 0.251747 178 7 0.253457 178 7 0.566416 83 4 0.5118116 286 7 0.393273 197 7 0.232474 185 7 0.647522 204 6 0.5330726 334 7 0.5522727 272 7 0.421970 376 7 0.6420703 187 5 0.7802750 88 7 0.6369048 247 5 0.559524 18 1 0.5220629 186 7 0.5001517 190 7 0.768319 221 7 0.5963387 175 7 0.6731373 163 7 0.5937453 162 7 0.6589546 219 7 0.3719944 0.2630868 0.357044 0.504715 0.416646 0.457659 0.243588 0.3792150 0.3968360 0.310718 0.337464 0.2363656 0.567994 0.4928327 0.5741619 0.1861234 0.4152343 0.5132982 0.3908709 0.5948998 0.221019 0.6591993 0.251764 0.1610444 0.4424133 0.4958533 0.2997353 0.2412050 0.5032063 0.539951 0.5796361 0.1768298 0.6556292 0.8408245 0.88610202 0.7989822 0.7640717 0.8220904 0.7510284 0.6280605 0.6898906 0.6691978 0.7023070 4 0.419882 0.389584 0.02278562 7 0.461026 0.422142 3.8884e-02 0.47718463 0.91623302 insignificant 1.00000 1.000000 insignificant 0.49499878 0.93009534 insignificant 1.00000 1.000000 insignificant 0.03582878 0.46521133 insignificant 1.00000 insignificant 0.419882 0.7849345 -0.3343688 7 0.461026 0.4495191 0.0115070 3.3331e-01 4.4815e-12 hypomethylated 1.0000e+00 7.4692e-10 hypomethylated 5.4468e-01 1.8024e-05 hypomethylated 1.0000e+00 2.0027e-03 hypomethylated -0.1279713 2.7616e-02 weaklyHypometh 2.9069e-01 insignificant 0.419630 0.712766 -0.26697490 7 0.482308 0.651745 -0.1694363 9.9946e-01 1.5710e-14 hypomethylated 1.0000e+00 5.2367e-12 hypomethylated 9.9991e-01 5.5266e-10 hypomethylated 1.0000e+00 3.3571e-07 hypomethylated -0.1792389 1.4703e-03 weaklyHypometh 5.2510e-02 weaklyHypometh 0.389584 0.7849345 -0.36063425 7 0.422142 0.4495191 -2.7377e-02 6.4870e-01 5.8627e-07 hypomethylated 1.0000e+00 6.5141e-05 hypomethylated 5.9891e-01 2.1871e-04 hypomethylated 1.0000e+00 2.1871e-02 hypomethylated -0.1638001 1.5761e-02 weaklyHypometh 1.6948e-01 insignificant 0.390581 0.712766 -0.29814300 7 0.442499 0.651745 -0.20924550 9.9361e-01 1.5243e-08 hypomethylated 1.0000e+00 2.5405e-06 hypomethylated 9.9603e-01 3.3808e-07 hypomethylated 1.0000e+00 1.1269e-04 hypomethylated -0.2150677 1.0977e-03 weaklyHypometh 0.08572727 weaklyHypometh 0.7879121 0.712766 0.0512073 7 0.4827722 0.651745 -0.16897235 4.3193e-01 2.3971e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.4870e-01 2.9362e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0512677 3.5727e-01 insignificant 1.00000000 insignificant chr1 33003644 33004644 843 KIAA1522 ENSG00000162522 0.084792 641 17 0.1545790 664 17 0.243355 717 17 0.061537 582 17 0.051194 770 17 0.142380 1059 17 0.1227635 704 17 0.052452 661 17 0.0948526 723 17 0.066425 797 17 0.094638 808 17 0.144206 494 17 0.069365 571 17 0.1576107 567 17 0.0661008 984 17 0.102828 856 17 0.2897436 77 5 0.177807 675 17 0.057925 1028 17 0.063466 907 17 0.073340 495 16 0.1434278 336 16 0.112119 687 17 0.058726 634 15 0.151808 848 13 0.0549838 1017 17 0.047619 1015 17 0.046430 395 17 0.049780 914 17 0.0730837 1116 17 0.0942291 991 17 0.061559 1054 17 0.7929935 475 17 0.6037330 634 16 0.9355180 366 7 0.557601 315 12 0.6174440 369 17 0.6573335 898 17 0.178384 729 18 0.2051678 676 17 0.0912997 478 17 0.2490300 573 15 0.1946864 560 17 0.0916650 0.0877431 0.184859 0.077929 0.060435 0.172798 0.132400 0.0648325 0.1063448 0.069543 0.128338 0.1377720 0.071662 0.1268005 0.0707656 0.0948763 0.0733280 0.1813516 0.0653594 0.0685030 0.070700 0.1522541 0.064123 0.0445183 0.0783301 0.0593981 0.0537760 0.0886378 0.0592635 0.072557 0.0966004 0.0794079 0.7528840 0.5607558 0.71882958 0.4747350 0.6551930 0.6130318 0.1199527 0.1477560 0.0831878 0.1550421 0.1585840 14 0.091291 0.076656 0.02485696 17 0.164656 0.104575 6.0081e-02 0.00068992 0.99999824 weaklyHypermeth 0.17248 1.000000 insignificant 0.00013757 0.99999975 weaklyHypermeth 0.13757 1.000000 insignificant 0.03430878 0.06790468 insignificant 1.00000 insignificant 0.091234 0.6716858 -0.5449139 17 0.132719 0.6143266 -0.4816078 1.0000e+00 5.8853e-148 hypomethylated 1.0000e+00 5.8853e-145 hypomethylated 1.0000e+00 2.7184e-35 hypomethylated 1.0000e+00 2.7184e-32 hypomethylated -0.5792029 1.0313e-04 hypomethylated 2.8647e-03 hypomethylated 0.091087 0.150680 -0.04461084 17 0.155461 0.185928 -0.0304674 8.7495e-01 4.8839e-10 weaklyHypometh 1.0000e+00 1.1694e-07 weaklyHypometh 9.4155e-01 1.5878e-05 weaklyHypometh 1.0000e+00 3.9696e-03 weaklyHypometh -0.0688126 5.4919e-02 insignificant 6.5007e-01 insignificant 0.076664 0.6715734 -0.58373813 17 0.109329 0.6091299 -4.9980e-01 1.0000e+00 7.8873e-110 hypomethylated 1.0000e+00 7.8873e-107 hypomethylated 1.0000e+00 2.5363e-30 hypomethylated 1.0000e+00 2.5363e-27 hypomethylated -0.6135117 9.8707e-05 hypomethylated 3.1841e-03 hypomethylated 0.076469 0.151525 -0.06878524 17 0.074853 0.263459 -0.18860659 9.9799e-01 3.5620e-17 weaklyHypometh 1.0000e+00 3.5620e-14 weaklyHypometh 9.9994e-01 8.3053e-10 weaklyHypometh 1.0000e+00 8.3053e-07 weaklyHypometh -0.1031214 1.2380e-02 weaklyHypometh 0.32059312 insignificant 0.6714754 0.150680 0.5238089 17 0.6526767 0.185928 0.46674823 8.8632e-52 1.0000e+00 hypermethylated 8.8632e-49 1.0000e+00 hypermethylated 3.2596e-19 1.0000e+00 hypermethylated 3.2596e-16 1.0000e+00 hypermethylated 0.5103903 1.0394e-04 hypermethylated 0.00608999 hypermethylated chr1 36496144 36497144 894 ENSG00000218941 0.682453 172 7 0.7004263 158 7 0.560957 110 7 0.724451 118 7 0.728571 41 3 0.734489 211 7 0.6478022 75 7 0.646745 167 7 0.7052840 76 7 0.774725 75 7 0.806856 200 7 0.297619 21 0 0.825801 199 6 0.8481293 51 7 0.7185511 110 7 0.716484 39 3 0.2777778 14 0 0.731209 124 7 0.781194 113 7 0.727585 166 7 0.780612 30 3 0.8260771 61 7 0.818878 100 7 0.782738 47 3 0.824134 54 7 0.7769231 195 7 0.757576 84 7 0.772727 35 1 0.714223 174 7 0.7131210 225 7 0.7445463 228 7 0.790652 223 7 0.5725198 183 7 0.5276818 100 7 0.2134354 60 3 0.693750 67 4 0.4991311 127 7 0.6071086 190 7 0.734769 131 7 0.8242272 204 7 0.7547188 133 7 0.7970497 118 7 0.7371659 144 7 0.7068237 0.7067343 0.589047 0.758273 0.745833 0.761781 0.693643 0.6809663 0.6969786 0.806357 0.819382 0.3599537 0.853376 0.8516865 0.7478987 0.7083600 0.4077367 0.7564822 0.8029418 0.7663844 0.769841 0.8553571 0.855159 0.8142361 0.8358586 0.8117907 0.7674400 0.8140783 0.7514721 0.746102 0.7787822 0.8074757 0.5376157 0.4763736 0.23462302 0.5957012 0.5041086 0.6042102 0.7648182 0.8512325 0.7766196 0.8094278 0.7731882 1 0.725000 0.764423 -0.04714244 7 0.718333 0.764843 -4.6510e-02 0.99797734 0.00463692 weaklyHypometh 1.00000 0.405825 insignificant 0.99994046 0.00025579 weaklyHypometh 1.00000 0.063402 weaklyHypometh -0.09332845 0.01434485 weaklyHypometh 1.00000 insignificant 0.725000 0.5392022 0.1746833 7 0.718333 0.5773999 0.1409331 5.5624e-11 9.1231e-01 weaklyHypermeth 9.5903e-10 1.0000e+00 weaklyHypermeth 1.0748e-05 9.6745e-01 weaklyHypermeth 2.2391e-04 1.0000e+00 weaklyHypermeth 0.1629177 6.2929e-02 insignificant 5.4249e-01 insignificant 0.725000 0.773973 -0.06487575 7 0.718333 0.780081 -0.0617485 9.9771e-01 5.7914e-03 weaklyHypometh 1.0000e+00 1.6171e-01 insignificant 9.9847e-01 2.0473e-03 weaklyHypometh 1.0000e+00 1.0706e-01 insignificant -0.0877307 2.9700e-02 weaklyHypometh 4.7143e-01 insignificant 0.764423 0.5392022 0.21445869 7 0.764843 0.5773999 1.8744e-01 2.3373e-11 9.8920e-01 hypermethylated 4.3283e-10 1.0000e+00 hypermethylated 5.4883e-07 9.9998e-01 hypermethylated 1.8294e-05 1.0000e+00 hypermethylated 0.2562461 1.1816e-02 weaklyHypermeth 1.3975e-01 insignificant 0.764423 0.773973 -0.02188357 7 0.764843 0.780081 -0.01523873 8.3028e-01 2.6780e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.7759e-01 6.8325e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0055978 7.9529e-01 insignificant 1.00000000 insignificant 0.5392022 0.773973 -0.2217219 7 0.5773999 0.780081 -0.20268155 9.9980e-01 3.0660e-07 hypomethylated 1.0000e+00 8.5168e-06 hypomethylated 9.9914e-01 5.9023e-05 hypomethylated 1.0000e+00 2.1860e-03 hypomethylated -0.2506484 1.2288e-02 weaklyHypometh 0.16167838 insignificant chr1 36589244 36590244 897 FAM176B ENSG00000142694 0.757596 152 4 0.8954552 287 5 0.898451 144 5 0.811470 133 5 0.966667 85 5 0.856488 253 5 0.9073810 91 5 0.956086 195 5 0.9637566 117 5 0.904762 88 5 0.950901 236 5 0.966667 29 4 0.855196 160 5 0.9166667 150 5 0.8890533 192 5 1.000000 22 4 0.9972414 585 4 0.692452 106 5 0.833182 152 5 0.921053 120 5 0.913450 85 5 0.4909091 55 5 0.892913 101 4 0.905065 105 5 0.900000 51 4 0.8965205 392 5 0.903923 156 5 0.925481 69 5 0.803396 203 5 0.8570641 471 5 0.9168614 411 5 0.912205 161 5 0.0068966 139 5 0.0000000 46 4 0.0000000 181 5 0.000000 2 0 0.0813843 145 5 0.0093074 191 5 0.206667 48 4 0.2666667 52 4 0.3333333 25 4 0.6000000 26 4 0.4575758 53 5 0.8861839 0.9271651 0.895953 0.877086 0.961430 0.896290 0.914437 0.9595879 0.9575540 0.946921 0.960559 0.9628450 0.888243 0.9585987 0.8973811 1.0000000 0.9969251 0.6877880 0.8725284 0.9447169 0.936231 0.5755646 0.875190 0.9202664 0.8832272 0.9114501 0.9232848 0.9294538 0.9069892 0.911316 0.9305559 0.9311368 0.0085658 0.0000000 0.00000000 NA 0.0922480 0.0109811 0.2447983 0.3142251 0.3938429 0.7016985 0.4792511 4 0.931756 0.910619 0.01807467 5 0.909595 0.880716 2.8879e-02 0.11426583 0.97912897 insignificant 1.00000 1.000000 insignificant 0.03397792 0.99353415 weaklyHypermeth 1.00000 1.000000 insignificant 0.03721048 0.35466153 lowCoverage 1.00000 lowCoverage 0.931756 0.0213068 0.9066808 5 0.909595 0.0204225 0.8891725 2.4605e-79 1.0000e+00 hypermethylated 2.4605e-76 1.0000e+00 hypermethylated 4.7810e-13 1.0000e+00 hypermethylated 3.9841e-11 1.0000e+00 hypermethylated 0.8807615 1.8463e-21 lowCoverage 1.8463e-18 lowCoverage 0.931756 0.397059 0.53065832 4 0.909595 0.361230 0.5483654 1.7787e-41 1.0000e+00 lowCoverage 8.8934e-39 1.0000e+00 lowCoverage 4.2784e-12 1.0000e+00 lowCoverage 2.1392e-09 1.0000e+00 lowCoverage 0.5241777 1.2129e-03 lowCoverage 4.9401e-02 lowCoverage 0.910619 0.0213068 0.88102489 5 0.880716 0.0204225 8.6029e-01 1.0046e-56 1.0000e+00 hypermethylated 5.0228e-54 1.0000e+00 hypermethylated 4.9866e-11 1.0000e+00 hypermethylated 3.8358e-09 1.0000e+00 hypermethylated 0.8435510 2.8717e-12 lowCoverage 1.4359e-09 lowCoverage 0.910619 0.397059 0.51035790 4 0.880716 0.361230 0.51948686 8.6618e-27 1.0000e+00 lowCoverage 4.3309e-24 1.0000e+00 lowCoverage 1.8836e-10 1.0000e+00 lowCoverage 9.4180e-08 1.0000e+00 lowCoverage 0.4869672 7.7996e-04 lowCoverage 0.07185926 lowCoverage 0.0213068 0.397059 -0.3753662 4 0.0204225 0.361230 -0.34080708 1.0000e+00 1.7429e-10 lowCoverage 1.0000e+00 6.9717e-09 lowCoverage 9.9991e-01 3.4506e-06 lowCoverage 1.0000e+00 1.8161e-04 lowCoverage -0.3565838 6.3809e-03 lowCoverage 0.10815140 lowCoverage chr1 36609244 36610244 898 STK40 ENSG00000196182 0.858565 110 5 0.7485088 65 5 0.619345 53 5 0.787907 129 5 0.747619 32 5 0.662456 212 5 0.6621429 32 5 0.882632 103 5 0.7333333 18 2 0.805465 46 5 0.881006 164 5 0.643333 20 2 0.804545 59 5 0.9500000 22 2 0.7752020 47 5 0.700000 10 2 0.6250000 7 0 0.851716 102 5 0.797087 71 5 0.767033 148 5 0.806667 29 5 0.9666667 26 2 0.728030 74 5 0.807692 52 5 0.938095 32 5 0.6918036 135 5 0.940952 39 2 0.666667 17 2 0.826948 70 5 0.8184489 99 5 0.8333333 72 5 0.817210 204 5 0.7117416 67 5 0.5444444 48 5 0.7091575 81 5 0.802857 27 3 0.4726316 50 3 0.7531111 80 5 0.719063 104 5 0.8582009 154 5 0.8396337 122 5 0.7600000 49 5 0.7587427 133 5 0.8320956 0.7616287 0.585509 0.759887 0.776136 0.818178 0.673810 0.8392101 0.6858238 0.796089 0.857786 0.7291188 0.840648 0.9252874 0.7860618 0.7339724 0.6842130 0.8268234 0.8425758 0.7582797 0.815326 0.9501916 0.727586 0.8880416 0.9627805 0.8002739 0.9073892 0.6666667 0.8305344 0.802844 0.8045977 0.8345069 0.6990136 0.5103448 0.68262389 0.8312808 0.5495463 0.8029374 0.7367215 0.8711703 0.7834281 0.7873563 0.7720475 2 0.791034 0.810365 -0.01942623 5 0.705520 0.763359 -5.7839e-02 0.73424297 0.16435040 insignificant 1.00000 1.000000 insignificant 0.93479179 0.07927877 insignificant 1.00000 1.000000 insignificant -0.05506458 0.12336371 lowCoverage 1.00000 lowCoverage 0.790569 0.6940510 0.0953111 5 0.787728 0.6937863 0.0939421 2.2714e-03 9.9992e-01 weaklyHypermeth 1.5243e-02 1.0000e+00 weaklyHypermeth 1.6336e-02 9.9946e-01 weaklyHypermeth 1.3175e-01 1.0000e+00 insignificant 0.0994877 1.2334e-01 lowCoverage 8.6252e-01 lowCoverage 0.791580 0.793594 -0.00351525 5 0.823107 0.827060 -0.0039527 8.2620e-01 7.0147e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.1395e-01 8.6501e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0219832 5.2897e-01 lowCoverage 1.0000e+00 lowCoverage 0.810939 0.6940510 0.11717941 5 0.802036 0.6937863 1.0825e-01 1.1364e-03 9.9882e-01 weaklyHypermeth 8.1755e-03 1.0000e+00 weaklyHypermeth 7.6372e-04 9.9958e-01 weaklyHypermeth 1.0049e-02 1.0000e+00 weaklyHypermeth 0.1545523 3.1524e-02 lowCoverage 2.8482e-01 lowCoverage 0.812057 0.793594 0.01563021 5 0.835030 0.827060 0.00797010 5.2492e-01 3.9888e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.5950e-01 8.8236e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0330814 4.0179e-01 lowCoverage 1.00000000 lowCoverage 0.6940510 0.793226 -0.0969888 5 0.6937863 0.792472 -0.09868525 9.9871e-01 1.8013e-02 weaklyHypometh 1.0000e+00 1.1773e-01 insignificant 9.9952e-01 1.1416e-02 weaklyHypometh 1.0000e+00 1.2973e-01 insignificant -0.1214709 7.5809e-02 lowCoverage 0.55330936 lowCoverage chr1 38266944 38267944 917 UTP11L ENSG00000183520 0.415662 244 5 0.2035715 399 5 0.230200 203 5 0.310272 236 5 0.219229 204 5 0.488925 233 5 0.3205242 201 5 0.227601 233 5 0.2854162 194 5 0.279465 140 5 0.245093 323 5 0.264444 89 4 0.329566 196 4 0.2509087 165 5 0.2303842 249 5 0.506558 103 5 0.3750000 5 0 0.306540 272 5 0.299356 457 5 0.325418 195 5 0.355298 154 4 0.3588078 122 5 0.336364 212 5 0.465404 166 5 0.370238 180 5 0.2850005 514 5 0.319048 219 5 0.466939 143 6 0.203929 316 5 0.3613423 519 5 0.2026371 511 5 0.374437 325 5 0.1088800 297 5 0.1150245 213 5 0.1176471 266 5 0.076923 80 4 0.1087550 293 6 0.1385945 492 5 0.430883 287 5 0.2912237 203 5 0.4315296 197 5 0.3486179 233 5 0.1990055 241 5 0.3591051 0.2160490 0.278515 0.239424 0.212705 0.458948 0.300801 0.2489456 0.2944744 0.278580 0.297890 0.3079571 0.275884 0.2751174 0.2469104 0.3338957 NA 0.3219645 0.2968557 0.3644641 0.361701 0.3329385 0.341287 0.3280581 0.2566899 0.2652539 0.2488615 0.2487742 0.2216781 0.275958 0.2276253 0.3133388 0.0439994 0.0418090 0.02929459 0.0229850 0.0632616 0.0675326 0.1506980 0.2959855 0.2760637 0.2955722 0.1769186 4 0.309908 0.292221 0.01593218 5 0.324149 0.427302 -1.0315e-01 0.50883471 0.50504297 insignificant 1.00000 1.000000 insignificant 0.75222965 0.25619298 insignificant 1.00000 1.000000 insignificant -0.03591364 0.25175459 lowCoverage 1.00000 lowCoverage 0.309908 0.0645948 0.2395987 5 0.324149 0.0990271 0.2251219 5.7499e-21 9.9787e-01 hypermethylated 1.9827e-19 1.0000e+00 hypermethylated 4.3178e-10 9.9251e-01 hypermethylated 2.1589e-08 1.0000e+00 hypermethylated 0.1947360 1.7992e-09 lowCoverage 1.7992e-07 lowCoverage 0.309908 0.311800 0.06995490 5 0.324149 0.400966 -0.0768172 1.1499e-02 8.6405e-01 weaklyHypermeth 2.2998e-01 1.0000e+00 insignificant 4.8212e-02 5.9094e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant -0.0345452 5.0118e-01 lowCoverage 1.0000e+00 lowCoverage 0.292221 0.0645948 0.22622017 5 0.427302 0.0990271 3.2828e-01 1.2730e-14 9.9990e-01 hypermethylated 3.6370e-13 1.0000e+00 hypermethylated 4.5328e-09 1.0000e+00 hypermethylated 2.1585e-07 1.0000e+00 hypermethylated 0.2306497 4.3793e-07 hypermethylated 3.9812e-05 hypermethylated 0.292221 0.311800 0.05657840 5 0.427302 0.400966 0.02633610 8.5111e-02 9.6911e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.7651e-01 9.5115e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0013685 9.7908e-01 insignificant 1.00000000 insignificant 0.0645948 0.311800 -0.1708256 5 0.0990271 0.400966 -0.30193906 9.9941e-01 2.7560e-08 weaklyHypometh 1.0000e+00 9.5035e-07 weaklyHypometh 1.0000e+00 4.5037e-06 weaklyHypometh 1.0000e+00 2.2519e-04 weaklyHypometh -0.2292812 5.8061e-03 weaklyHypometh 0.10024641 insignificant chr1 38530144 38531144 921 ENSG00000218649 0.096089 393 11 0.1238726 268 15 0.219815 255 9 0.127350 277 8 0.135592 171 10 0.421329 324 14 0.1509890 283 11 0.169927 224 9 0.1068454 269 9 0.168911 196 7 0.241656 267 12 0.222427 192 7 0.033903 231 9 0.0000000 6 0 0.0263815 269 9 0.072005 164 7 0.0640981 218 7 0.225831 321 8 0.157085 196 11 0.140961 318 11 0.360135 107 9 0.2358978 117 6 0.225384 215 11 0.103232 135 9 0.250529 323 11 0.1815584 369 14 0.177959 184 7 0.274740 86 7 0.336426 181 11 0.1731885 363 14 0.1990530 349 14 0.179935 318 11 0.1547399 254 12 0.1247395 214 11 0.0974563 629 12 0.406104 223 8 0.1391987 159 15 0.3900913 257 14 0.313827 390 10 0.3639287 264 14 0.2055007 367 11 0.3256118 290 8 0.2804246 276 8 0.0779603 0.0291019 0.076680 0.038000 0.017110 0.126824 0.045541 0.0407235 0.0591101 0.010435 0.102531 0.0424988 0.044863 0.0277265 0.0384683 0.0354120 0.0682442 0.1126246 0.0355878 0.0435427 0.092756 0.1674500 0.120491 0.0096233 0.0462784 0.0432458 0.0328690 0.0173142 0.0623024 0.042759 0.0339537 0.0377925 0.2017217 0.1521093 0.22608068 0.2859827 0.1221431 0.3682040 0.1270033 0.3161596 0.0662485 0.1202697 0.1358802 4 0.102230 0.111799 0.00145004 11 0.186424 0.192586 -6.1624e-03 0.74382681 0.51768203 insignificant 1.00000 1.000000 insignificant 0.98817190 0.31188491 insignificant 1.00000 1.000000 insignificant -0.07958302 0.01241266 weaklyHypometh 1.00000 insignificant 0.102230 0.2315668 -0.1259414 11 0.186424 0.1573209 0.0291029 9.0140e-02 9.9236e-08 weaklyHypometh 4.1926e-01 8.2696e-06 weaklyHypometh 6.3790e-01 1.0708e-02 weaklyHypometh 1.0000e+00 6.0607e-01 insignificant -0.0734683 2.7128e-01 insignificant 1.0000e+00 insignificant 0.102336 0.202268 -0.08313744 8 0.195745 0.332639 -0.1368944 9.9845e-01 2.6061e-09 weaklyHypometh 1.0000e+00 3.7230e-07 weaklyHypometh 9.9999e-01 1.0086e-04 weaklyHypometh 1.0000e+00 1.2607e-02 weaklyHypometh -0.1526052 1.2350e-03 weaklyHypometh 4.9401e-02 weaklyHypometh 0.111799 0.2315668 -0.11789129 11 0.192586 0.1573209 3.5265e-02 5.6050e-03 2.7899e-05 weaklyHypometh 3.5475e-02 2.4600e-03 weaklyHypometh 3.7062e-01 1.3685e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0061147 9.2324e-01 insignificant 1.0000e+00 insignificant 0.111880 0.202268 -0.07642739 8 0.202216 0.332639 -0.13042387 9.3226e-01 1.7995e-05 weaklyHypometh 1.0000e+00 1.7995e-03 weaklyHypometh 9.6928e-01 1.0304e-02 weaklyHypometh 1.0000e+00 6.0882e-01 insignificant -0.0730221 5.9247e-02 insignificant 0.82029062 insignificant 0.2323699 0.202268 0.0604634 8 0.1651869 0.332639 -0.16745247 8.9750e-01 2.8763e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9596e-01 4.4484e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0791368 2.5067e-01 insignificant 1.00000000 insignificant chr1 39054244 39055244 934 ENSG00000215895 0.658347 295 6 0.2885800 245 6 0.639317 183 6 0.521743 269 6 0.817460 92 6 0.666848 369 6 0.6398659 128 6 0.613387 233 6 0.7136082 147 6 0.881576 146 5 0.819348 318 6 0.491212 66 4 0.664173 175 5 0.7487416 141 5 0.7072061 233 6 0.652778 24 1 1.0000000 1 0 0.728742 363 6 0.771651 190 6 0.537890 279 6 0.424306 72 5 0.4967197 126 6 0.445128 141 6 0.412385 110 5 0.813067 114 5 0.8272732 286 6 0.536502 194 6 0.644023 75 3 0.758547 169 6 0.7966098 300 6 0.6570094 253 6 0.518277 272 6 0.1191118 245 6 0.1552230 144 6 0.2857143 87 2 0.000000 10 0 0.1042943 286 6 0.0174675 388 6 0.508732 211 6 0.5258447 227 6 0.6724269 227 6 0.4812105 210 6 0.4847985 241 6 0.7237628 0.5125168 0.619147 0.683137 0.803182 0.825704 0.728381 0.8353235 0.7428447 0.743456 0.848663 0.5847016 0.710353 0.7801992 0.6726641 0.7925844 NA 0.6408755 0.8164519 0.7199491 0.541924 0.5386295 0.642251 0.5332011 0.8763262 0.8543513 0.6658104 0.7825999 0.7545794 0.844915 0.7752773 0.5981087 0.0682491 0.0734240 0.02437490 0.0286053 0.0973147 0.0226164 0.4995066 0.5666669 0.6786119 0.5189539 0.5525344 2 0.693258 0.699811 0.00080661 6 0.637883 0.535352 1.0253e-01 0.77457883 0.91682549 insignificant 1.00000 1.000000 insignificant 0.38099787 0.99945880 insignificant 1.00000 1.000000 insignificant 0.06730313 0.25038315 insignificant 1.00000 insignificant 0.694115 0.0689655 0.6318061 6 0.726942 0.2759842 0.4509581 1.2196e-42 1.0000e+00 hypermethylated 9.3817e-41 1.0000e+00 hypermethylated 2.5446e-13 1.0000e+00 hypermethylated 2.3833e-11 1.0000e+00 hypermethylated 0.5644886 1.9506e-07 lowCoverage 1.3004e-05 lowCoverage 0.693715 0.594086 0.13744755 6 0.639641 0.485995 0.1536461 8.3370e-05 9.9150e-01 weaklyHypermeth 3.0878e-03 1.0000e+00 weaklyHypermeth 2.5636e-05 9.9996e-01 weaklyHypermeth 3.6623e-03 1.0000e+00 weaklyHypermeth 0.1435211 1.2308e-02 weaklyHypermeth 2.6757e-01 insignificant 0.702716 0.0690250 0.63330577 6 0.740781 0.3104822 4.3030e-01 2.8945e-27 1.0000e+00 hypermethylated 1.4473e-25 1.0000e+00 hypermethylated 3.8746e-11 1.0000e+00 hypermethylated 3.5223e-09 1.0000e+00 hypermethylated 0.4971855 1.1029e-06 lowCoverage 7.8777e-05 lowCoverage 0.702239 0.594619 0.14051525 6 0.615781 0.546744 0.06903684 2.0197e-03 9.9703e-01 weaklyHypermeth 5.6102e-02 1.0000e+00 weaklyHypermeth 2.2092e-02 9.8223e-01 weaklyHypermeth 4.9093e-01 1.0000e+00 insignificant 0.0762180 2.0849e-01 insignificant 1.00000000 insignificant 0.0682211 0.594255 -0.5064045 6 0.2119797 0.481993 -0.27001337 1.0000e+00 1.7061e-25 hypomethylated 1.0000e+00 4.2652e-23 hypomethylated 9.9999e-01 1.7140e-08 hypomethylated 1.0000e+00 1.7140e-06 hypomethylated -0.4209675 3.2875e-05 lowCoverage 0.00360740 lowCoverage chr1 39349544 39350544 942 MACF1 ENSG00000127603 0.839141 33 2 0.6884921 29 3 0.666667 14 0 0.769345 62 5 0.847144 109 2 0.892593 35 3 0.8571565 103 5 0.686869 44 3 0.7369780 45 5 0.791667 33 4 0.802128 45 3 0.793913 62 2 0.850409 107 2 0.8791228 70 2 0.6500000 59 2 0.593567 46 2 0.7428516 46 4 0.700255 68 2 0.802273 44 4 0.833333 10 0 0.366667 20 2 0.6587302 27 3 0.761896 104 5 0.753968 20 2 0.524943 34 3 0.7887446 54 5 0.555556 14 0 0.875000 14 1 0.765377 46 2 0.8138889 27 4 0.8047619 20 3 0.728571 21 3 0.7254183 93 5 0.8333333 15 0 0.6446929 96 5 0.800000 14 2 0.7231692 54 5 0.7500000 29 3 0.733333 17 0 0.8166667 22 2 0.8333333 19 1 0.7485507 111 5 0.8055556 26 4 0.8067258 0.6660859 0.666667 0.662456 0.841969 0.806442 0.830974 0.6149298 0.7608550 0.969512 0.727211 0.7873454 0.846099 0.8480103 0.6199187 0.4358151 0.6968560 0.8838560 0.8580931 0.7416504 0.308943 0.7444832 0.693575 0.6945412 0.4328300 0.6795639 0.7154472 0.8475610 0.7040505 0.747154 0.7886179 0.7073171 0.6054794 0.8780488 0.54073303 0.8112661 0.6329453 0.8613659 0.7540650 0.8170732 0.8292683 0.8891835 0.9593496 0 0.775376 0.733167 0.03771563 3 0.778475 0.768926 9.5486e-03 0.22370715 0.64286984 lowCoverage 1.00000 1.000000 lowCoverage 0.12766203 0.80591106 lowCoverage 1.00000 1.000000 lowCoverage 0.07135331 0.14529845 lowCoverage 1.00000 lowCoverage 0.775376 0.7043189 0.0700672 5 0.778475 0.7235811 0.0548937 1.6068e-01 9.8651e-01 insignificant 7.0347e-01 1.0000e+00 insignificant 6.1200e-01 9.5170e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0250930 4.6234e-01 lowCoverage 1.0000e+00 lowCoverage 0.773206 0.887179 -0.10528482 3 0.730274 0.732961 -0.0026865 2.8046e-01 9.8811e-03 lowCoverage 1.0000e+00 2.0586e-01 lowCoverage 5.0974e-01 1.3349e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0162926 5.6053e-01 lowCoverage 1.0000e+00 lowCoverage 0.733167 0.7043189 0.03219122 3 0.768926 0.7235811 4.5345e-02 3.8368e-01 9.6940e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.3285e-01 7.4499e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0462603 3.7172e-01 lowCoverage 1.0000e+00 lowCoverage 0.727735 0.887179 -0.14857642 2 0.691902 0.732961 -0.04105902 8.1627e-01 3.4124e-03 lowCoverage 1.0000e+00 1.4218e-01 lowCoverage 7.8869e-01 1.4355e-02 lowCoverage 1.0000e+00 6.5250e-01 lowCoverage -0.0876459 8.1786e-02 lowCoverage 0.98537896 lowCoverage 0.7016949 0.887179 -0.1795914 3 0.6647748 0.732961 -0.06818579 9.5849e-01 1.5697e-03 lowCoverage 1.0000e+00 1.5240e-02 lowCoverage 8.7205e-01 2.4488e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0413856 2.4711e-01 lowCoverage 1.00000000 lowCoverage chr1 39368544 39369544 946 ENSG00000206654 0.837204 73 3 0.6026213 119 5 0.615476 51 5 0.665238 79 5 0.644048 34 5 0.651565 88 5 0.5861538 52 5 0.667172 69 5 0.6923810 30 5 0.568333 23 2 0.608191 133 5 0.833333 6 0 0.733131 53 5 0.6333333 31 5 0.7266667 37 3 0.600000 6 0 1.0000000 5 0 0.678913 80 3 0.628745 61 5 0.581818 76 5 0.606667 22 3 0.2500000 4 0 0.660000 48 5 0.894286 31 3 0.703947 46 2 0.7570802 95 5 0.680476 51 3 0.375000 8 0 0.653205 82 3 0.7251307 97 5 0.6991700 112 5 0.541592 51 5 0.6683953 86 5 0.5619048 43 4 0.5579588 101 5 0.505952 15 2 0.4672549 57 4 0.7304029 86 5 0.510150 56 4 0.5978992 109 5 0.6591180 101 5 0.6777778 24 3 0.7111989 73 4 0.7737027 0.6118253 0.595885 0.677381 0.674172 0.706196 0.596990 0.6289526 0.7049689 0.472826 0.610345 0.7786814 0.731555 0.5760870 0.7384058 0.5652174 0.9252420 0.6634452 0.6308583 0.5741107 0.608696 0.5782651 0.682609 0.8472050 0.6950761 0.7834736 0.6604037 0.3424362 0.6352425 0.735028 0.7154752 0.5530846 0.6766641 0.5372671 0.51311337 0.5175923 0.5116155 0.7737697 0.5344067 0.6052704 0.6573352 0.6920290 0.7048534 0 0.650995 0.700155 -0.04186666 5 0.649945 0.690435 -4.0489e-02 0.97477759 0.02775502 weaklyHypometh 1.00000 0.611593 insignificant 0.75109423 0.14607190 insignificant 1.00000 1.000000 insignificant 0.04883674 0.38915510 lowCoverage 1.00000 lowCoverage 0.650995 0.6134021 0.0449416 5 0.649945 0.6100578 0.0398873 5.6293e-02 8.8528e-01 insignificant 2.7868e-01 1.0000e+00 insignificant 6.5227e-02 9.9303e-01 insignificant 3.8956e-01 1.0000e+00 insignificant 0.0957380 7.3264e-02 lowCoverage 5.8374e-01 lowCoverage 0.650995 0.644628 0.00695077 5 0.649945 0.641356 0.0085892 4.9782e-01 5.4412e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.3615e-01 7.6022e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0464874 3.0762e-01 lowCoverage 1.0000e+00 lowCoverage 0.700155 0.6134021 0.08963816 5 0.690435 0.6100578 8.0377e-02 7.5682e-03 9.5772e-01 weaklyHypermeth 4.6717e-02 1.0000e+00 weaklyHypermeth 3.5349e-02 9.5998e-01 weaklyHypermeth 2.3104e-01 1.0000e+00 insignificant 0.0469013 4.7616e-01 lowCoverage 1.0000e+00 lowCoverage 0.700155 0.644628 0.04067136 5 0.690435 0.641356 0.04907863 1.5393e-01 9.3469e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.4080e-01 7.1221e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0023494 9.6985e-01 lowCoverage 1.00000000 lowCoverage 0.6134021 0.644628 -0.0302016 5 0.6100578 0.641356 -0.03129817 8.4984e-01 2.6066e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3567e-01 2.9765e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0492507 3.8451e-01 lowCoverage 1.00000000 lowCoverage chr1 39413444 39414444 953 ENSG00000210142,ENSG00000222378 0.700290 162 7 0.6887864 206 8 0.634252 108 6 0.645166 188 7 0.818473 97 7 0.802505 196 8 0.7700893 142 6 0.837395 100 7 0.7611111 73 6 0.687915 79 5 0.753001 272 8 0.671266 54 5 0.643216 104 8 0.8146568 87 7 0.7602881 90 5 0.783951 81 5 0.6763758 522 3 0.736794 207 8 0.820534 106 6 0.639592 123 7 0.714782 56 3 0.8833333 30 4 0.821527 144 7 0.756321 76 4 0.775298 107 6 0.6097493 249 7 0.716843 79 6 0.670872 60 6 0.764935 147 5 0.8634493 191 7 0.6468674 205 7 0.683044 143 8 0.7215103 155 7 0.5989583 96 6 0.6362729 201 8 0.607297 33 3 0.6658185 115 7 0.5836218 216 8 0.849934 224 7 0.7766262 197 7 0.5861996 222 7 0.7855758 122 5 0.7915496 223 8 0.8445292 0.7354982 0.735720 0.818080 0.758983 0.868730 0.815146 0.8959639 0.7858664 0.814732 0.768050 0.6886801 0.774237 0.8438793 0.8079844 0.7827704 0.8483037 0.8091586 0.8290468 0.7817206 0.724425 0.8963052 0.784786 0.9155842 0.7914831 0.8125929 0.7601566 0.8149161 0.8248590 0.827183 0.7700027 0.8035274 0.7599255 0.6360132 0.79290918 0.8042985 0.7949974 0.7824138 0.8294541 0.8657491 0.8214204 0.7924653 0.8379397 4 0.781782 0.780767 0.00789458 7 0.714848 0.742081 -2.7234e-02 0.41805883 0.74857727 insignificant 1.00000 1.000000 insignificant 0.94866631 0.27939692 insignificant 1.00000 1.000000 insignificant -0.00996883 0.73406466 insignificant 1.00000 insignificant 0.782681 0.6948529 0.0732444 7 0.750656 0.6493773 0.1012783 2.3453e-05 9.5046e-01 weaklyHypermeth 2.2125e-04 1.0000e+00 weaklyHypermeth 4.4004e-02 7.9990e-01 weaklyHypermeth 2.8574e-01 1.0000e+00 insignificant 0.0967030 3.3527e-03 weaklyHypermeth 5.4693e-02 weaklyHypermeth 0.782827 0.787449 -0.01413526 6 0.769836 0.781841 -0.0120047 7.1660e-01 1.2904e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.5649e-01 2.5647e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0256942 6.1106e-01 insignificant 1.0000e+00 insignificant 0.780702 0.6948529 0.06220847 7 0.726873 0.6493773 7.7496e-02 5.5708e-04 9.5418e-01 weaklyHypermeth 4.2085e-03 1.0000e+00 weaklyHypermeth 6.6868e-03 9.5719e-01 weaklyHypermeth 6.1347e-02 1.0000e+00 weaklyHypermeth 0.1066718 4.7093e-03 weaklyHypermeth 6.7275e-02 weaklyHypermeth 0.780471 0.787449 -0.02760830 6 0.722242 0.781841 -0.05959896 7.1940e-01 1.8683e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.6169e-01 4.9737e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0157254 7.6785e-01 insignificant 1.00000000 insignificant 0.6948529 0.787018 -0.0854826 6 0.6493773 0.763661 -0.11428332 9.9916e-01 2.5853e-03 weaklyHypometh 1.0000e+00 2.2879e-02 weaklyHypometh 9.9854e-01 7.1285e-02 insignificant 1.0000e+00 4.6289e-01 insignificant -0.1223972 5.0190e-02 insignificant 0.40476008 insignificant chr1 39635144 39636144 969 MACF1 ENSG00000127603 0.724273 247 7 0.6228369 161 7 0.618427 114 7 0.754960 167 7 0.716053 82 6 0.683855 272 7 0.6708433 116 7 0.703954 111 7 0.7118729 109 7 0.736971 117 7 0.782395 215 7 0.873094 50 7 0.761034 119 7 0.8611111 21 1 0.7400272 124 7 0.689610 34 4 0.6502666 101 6 0.720293 129 7 0.729688 138 7 0.699003 234 7 0.657738 45 5 0.6850108 71 6 0.762793 130 6 0.696875 62 5 0.770443 55 5 0.6610192 268 7 0.739547 78 6 0.723611 41 5 0.702222 96 7 0.6685077 195 7 0.6436635 202 7 0.734104 326 7 0.6564935 121 7 0.6458627 167 7 0.7264509 173 6 0.694372 55 5 0.7224490 72 6 0.6376322 211 7 0.782367 226 7 0.7532347 297 7 0.6921947 239 7 0.7395330 188 7 0.7427496 293 7 0.7622339 0.6674022 0.646506 0.794954 0.715768 0.726507 0.718790 0.7253071 0.7549797 0.744196 0.818699 0.8572627 0.747137 0.7101500 0.7729094 0.7022398 0.6894338 0.7464885 0.7989935 0.7717749 0.801817 0.7665736 0.779182 0.7870945 0.7844411 0.7340624 0.7557445 0.8094471 0.6831857 0.725206 0.7167826 0.7503106 0.6992022 0.6917415 0.76137105 0.6821110 0.7697032 0.6421766 0.8093831 0.7958805 0.7423460 0.7951529 0.8012638 2 0.734310 0.737412 0.00865820 7 0.721645 0.674335 4.7309e-02 0.06719527 0.52684708 insignificant 1.00000 1.000000 insignificant 0.20592926 0.34113307 insignificant 1.00000 1.000000 insignificant 0.01873377 0.33292828 insignificant 1.00000 insignificant 0.734310 0.7221527 0.0483138 7 0.721645 0.6991339 0.0225109 6.7295e-03 9.9162e-01 weaklyHypermeth 3.9585e-02 1.0000e+00 weaklyHypermeth 1.8179e-01 9.5498e-01 insignificant 9.5621e-01 1.0000e+00 insignificant 0.0419850 7.2616e-02 insignificant 5.8374e-01 insignificant 0.734087 0.738536 -0.04203011 7 0.705689 0.744801 -0.0391117 9.9701e-01 1.4968e-02 weaklyHypometh 1.0000e+00 2.9349e-01 insignificant 9.9683e-01 1.2998e-02 weaklyHypometh 1.0000e+00 2.9126e-01 insignificant -0.0194874 3.6142e-01 insignificant 1.0000e+00 insignificant 0.737412 0.7221527 0.04279110 7 0.674335 0.6991339 -2.4799e-02 1.3216e-02 5.6354e-01 weaklyHypermeth 7.6835e-02 1.0000e+00 weaklyHypermeth 5.0686e-02 6.2524e-01 insignificant 3.0351e-01 1.0000e+00 insignificant 0.0232512 2.7293e-01 insignificant 1.0000e+00 insignificant 0.738768 0.738536 -0.04989851 7 0.692747 0.744801 -0.05205408 9.9572e-01 1.4848e-02 weaklyHypometh 1.0000e+00 4.0130e-01 insignificant 8.8782e-01 1.3987e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0382211 7.2626e-02 insignificant 0.93738558 insignificant 0.7218045 0.738536 -0.0933498 7 0.6561530 0.744801 -0.08864800 9.9867e-01 7.6320e-06 weaklyHypometh 1.0000e+00 1.4400e-04 weaklyHypometh 9.9386e-01 3.8146e-03 weaklyHypometh 1.0000e+00 5.5589e-02 weaklyHypometh -0.0614724 1.9365e-02 weaklyHypometh 0.21280471 insignificant chr1 39653544 39654544 971 MACF1 ENSG00000127603 0.815762 436 12 0.6964148 144 10 0.736576 172 11 0.874175 269 12 0.858095 121 10 0.822092 215 11 0.8437719 109 7 0.769309 197 9 0.7730221 121 8 0.820040 135 8 0.829367 264 11 0.715873 81 10 0.893422 157 8 0.8000000 56 4 0.8485507 139 7 0.781494 86 9 0.6676091 76 7 0.880915 316 12 0.854028 138 9 0.821587 169 9 0.908009 53 6 0.8800000 62 5 0.806688 162 12 0.670892 126 7 0.806527 70 7 0.8226682 221 11 0.893788 77 7 0.834615 71 6 0.792509 124 9 0.8289255 227 11 0.6850677 172 11 0.806886 273 10 0.7242403 176 7 0.7743668 98 8 0.8491823 204 9 0.681589 88 9 0.7106061 72 7 0.7316358 168 11 0.898720 363 12 0.8866617 366 12 0.8537763 372 12 0.9309722 326 11 0.8665046 291 12 0.7493650 0.7253316 0.714455 0.831979 0.843886 0.771624 0.800263 0.7698250 0.7729350 0.822737 0.800608 0.7707934 0.868490 0.7806476 0.8465918 0.7441784 0.7365901 0.8173764 0.8258466 0.8068685 0.853741 0.8376068 0.730958 0.7179487 0.7325538 0.7807859 0.8872587 0.7991453 0.7242389 0.755398 0.7180970 0.7701900 0.7604400 0.8031809 0.80012521 0.5955896 0.6892988 0.7885802 0.8635514 0.8611559 0.8258496 0.9102045 0.8438127 5 0.801823 0.777167 0.02343641 10 0.841358 0.834036 7.3221e-03 0.26741472 0.92369553 insignificant 1.00000 1.000000 insignificant 0.51419035 0.70532768 insignificant 1.00000 1.000000 insignificant -0.00627611 0.80581929 insignificant 1.00000 insignificant 0.801765 0.7540373 0.0455137 9 0.828138 0.7606680 0.0674698 1.4276e-03 9.5246e-01 weaklyHypermeth 1.0125e-02 1.0000e+00 weaklyHypermeth 1.7861e-03 6.6599e-01 weaklyHypermeth 2.0530e-02 1.0000e+00 weaklyHypermeth 0.0598352 6.2027e-02 insignificant 5.4249e-01 insignificant 0.801823 0.874272 -0.06031316 10 0.841358 0.893908 -0.0525498 1.0000e+00 6.7503e-03 weaklyHypometh 1.0000e+00 1.7764e-01 insignificant 9.9907e-01 2.8588e-02 weaklyHypometh 1.0000e+00 4.9933e-01 insignificant -0.0822217 8.2489e-04 weaklyHypometh 3.9280e-02 weaklyHypometh 0.776485 0.7540373 0.02136789 9 0.820206 0.7606680 5.9538e-02 5.7419e-02 3.4698e-01 insignificant 2.7873e-01 1.0000e+00 insignificant 4.3009e-02 6.2400e-01 weaklyHypermeth 2.6386e-01 1.0000e+00 insignificant 0.0661113 6.0649e-02 insignificant 4.9712e-01 insignificant 0.777167 0.874272 -0.08471559 10 0.834036 0.893908 -0.05987193 9.9999e-01 1.2598e-03 weaklyHypometh 1.0000e+00 6.6304e-02 weaklyHypometh 9.7674e-01 5.1152e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0759456 8.0657e-03 weaklyHypometh 0.26018367 insignificant 0.7540373 0.874199 -0.1080536 9 0.7606680 0.885067 -0.12439881 8.9516e-01 1.5955e-06 weaklyHypometh 1.0000e+00 3.5456e-05 weaklyHypometh 7.6985e-01 6.6556e-06 weaklyHypometh 1.0000e+00 3.1694e-04 weaklyHypometh -0.1420569 1.0205e-03 weaklyHypometh 0.03401810 weaklyHypometh chr1 40577144 40578144 990 ENSG00000217765 0.757400 158 5 0.6825330 54 5 0.716353 60 5 0.868003 73 5 0.808333 33 4 0.724520 154 5 0.6954029 65 5 0.813889 32 3 0.8216450 40 4 0.723377 50 5 0.707052 96 5 0.671825 41 5 0.855345 60 5 NA 0 0 0.7265332 59 5 0.774892 44 5 0.7406954 52 5 0.683628 88 5 0.720088 86 5 0.777870 156 5 0.759524 33 4 0.7866667 43 4 0.751662 102 5 0.904762 30 4 0.916667 28 3 0.7050855 86 5 0.813333 47 4 0.760000 38 3 0.547532 33 5 0.8445344 84 5 0.7750324 82 5 0.824246 222 5 0.8281962 69 4 0.6450089 66 5 0.6678388 70 5 0.660606 38 4 0.7501832 34 3 0.6936174 112 5 0.783328 173 5 0.8570713 181 5 0.7780796 100 5 0.8042904 127 5 0.8634816 95 5 0.7932333 0.6685733 0.726924 0.873312 0.828901 0.745572 0.716656 0.7980693 0.7846858 0.756517 0.708504 0.7000169 0.843929 NA 0.7547569 0.7983175 0.7621530 0.7102987 0.7187694 0.7846747 0.767139 0.8427896 0.768070 0.8963188 0.9095745 0.7423559 0.7869976 0.7612293 0.5618495 0.865105 0.8046807 0.8231294 0.7967057 0.6320780 0.69974411 0.6092127 0.7930663 0.7276465 0.7906277 0.8695888 0.8062231 0.8225138 0.8829059 4 0.757316 0.799517 -0.04326335 5 0.743281 0.790621 -4.7340e-02 0.99811159 0.01224389 weaklyHypometh 1.00000 0.492372 insignificant 0.98976532 0.05134888 insignificant 1.00000 0.987478 insignificant -0.03140022 0.32632353 lowCoverage 1.00000 lowCoverage 0.757316 0.6992288 0.0556087 5 0.743281 0.6921758 0.0511053 4.2723e-04 7.4459e-01 weaklyHypermeth 3.2864e-03 1.0000e+00 weaklyHypermeth 2.6821e-02 8.4596e-01 weaklyHypermeth 1.9296e-01 1.0000e+00 insignificant 0.0434452 2.0803e-01 lowCoverage 1.0000e+00 lowCoverage 0.757316 0.831361 -0.07422107 5 0.743281 0.818045 -0.0747635 9.9833e-01 8.8755e-04 weaklyHypometh 1.0000e+00 4.0343e-02 weaklyHypometh 9.9892e-01 2.6853e-03 weaklyHypometh 1.0000e+00 1.0950e-01 insignificant -0.0662300 1.6720e-02 lowCoverage 3.2785e-01 lowCoverage 0.799517 0.6992288 0.09715344 5 0.790621 0.6921758 9.8445e-02 3.3085e-05 9.8608e-01 weaklyHypermeth 3.2437e-04 1.0000e+00 weaklyHypermeth 4.7532e-03 9.8980e-01 weaklyHypermeth 4.6583e-02 1.0000e+00 weaklyHypermeth 0.0748454 8.1960e-02 lowCoverage 6.0265e-01 lowCoverage 0.799517 0.831361 -0.02800632 5 0.790621 0.818045 -0.02742338 8.7159e-01 2.7343e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.0483e-01 4.7290e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0348297 3.1188e-01 lowCoverage 1.00000000 lowCoverage 0.6992288 0.831361 -0.1278644 5 0.6921758 0.818045 -0.12586880 9.9992e-01 2.0789e-04 weaklyHypometh 1.0000e+00 2.6791e-03 weaklyHypometh 9.9879e-01 3.8825e-03 weaklyHypometh 1.0000e+00 5.5589e-02 weaklyHypometh -0.1096752 1.1287e-02 lowCoverage 0.15472470 lowCoverage chr1 40630544 40631544 993 SMAP2 ENSG00000084070 0.678205 171 5 0.8272610 172 5 0.642857 36 5 0.803692 201 5 0.588719 41 5 0.659564 194 5 0.7051282 49 5 0.747222 90 5 0.5416667 29 2 0.800000 25 5 0.682670 174 5 0.666667 6 0 0.717532 48 5 0.9107143 27 2 0.8802083 52 5 0.508929 27 2 1.0000000 7 1 0.589616 221 6 0.861667 59 5 0.815757 143 5 0.729592 32 3 1.0000000 9 0 0.777882 86 5 0.900000 34 5 0.805271 106 5 0.8443548 118 5 0.811111 48 4 0.928571 20 0 0.699634 84 5 0.7075325 132 5 0.7784086 107 5 0.840712 167 5 0.6673568 111 5 0.5925926 104 5 0.7619048 112 5 1.000000 21 3 0.7411765 73 5 0.7931034 116 5 0.800823 143 5 0.8615840 234 5 0.8304635 295 5 0.5705128 69 5 0.8252174 163 5 0.8149605 0.7919415 0.554007 0.801650 0.824816 0.798633 0.644331 0.7500000 0.6463415 0.795122 0.753248 0.8110595 0.752930 0.8780488 0.8089431 0.6019164 NA 0.8259110 0.8584350 0.8099983 0.815331 0.8436515 0.730515 0.9609756 0.8122959 0.7743017 0.7593496 0.8902439 0.7686054 0.843295 0.7697073 0.8120583 0.7922789 0.5740741 0.69337979 1.0000000 0.7340131 0.7851416 0.8271140 0.8352126 0.7925311 0.6833959 0.8225212 0 0.796275 0.858511 -0.02262894 5 0.668902 0.817891 -1.4899e-01 0.96135510 0.01116250 weaklyHypometh 1.00000 0.492372 insignificant 0.98710204 0.02445186 weaklyHypometh 1.00000 0.740966 insignificant -0.08718532 0.03352729 lowCoverage 1.00000 lowCoverage 0.796813 0.8100559 0.0110988 5 0.675203 0.7090115 -0.0338083 1.3641e-01 5.8201e-03 inconclusive 6.0898e-01 3.4236e-01 insignificant 4.9668e-01 4.6170e-02 inconclusive 1.0000e+00 1.0000e+00 insignificant -0.0279519 6.7154e-01 lowCoverage 1.0000e+00 lowCoverage 0.796813 0.853982 -0.03500819 5 0.675203 0.783638 -0.1084351 9.7957e-01 4.5035e-02 weaklyHypometh 1.0000e+00 6.5267e-01 insignificant 8.8403e-01 4.7029e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0463163 4.6766e-01 lowCoverage 1.0000e+00 lowCoverage 0.858369 0.8100559 0.02114457 5 0.784965 0.7090115 7.5954e-02 1.2724e-01 2.1274e-01 insignificant 5.6055e-01 1.0000e+00 insignificant 4.1808e-01 3.6979e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0592334 3.7207e-01 lowCoverage 1.0000e+00 lowCoverage 0.858369 0.853982 -0.01332049 5 0.784965 0.783638 0.00132721 7.6060e-01 3.7804e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.5028e-01 9.0126e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0408690 5.1305e-01 lowCoverage 1.00000000 lowCoverage 0.8100559 0.853982 -0.0410021 5 0.7090115 0.783638 -0.07462672 1.0046e-01 1.6581e-01 insignificant 1.0000e+00 7.8212e-01 insignificant 5.0846e-02 5.7480e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0183644 8.1740e-01 lowCoverage 1.00000000 lowCoverage chr1 40820844 40821844 995 ENSG00000220190 0.792766 167 4 0.5995985 140 6 0.650101 82 5 0.709275 147 6 0.834193 69 3 0.751250 360 6 0.7250752 101 4 0.713121 162 6 0.6622134 101 5 0.837500 73 3 0.675954 169 6 0.605000 59 5 0.761291 131 6 0.8809524 28 3 0.6612681 130 6 0.874339 62 3 0.8465538 63 3 0.766450 116 4 0.797591 126 3 0.767861 291 6 0.703307 80 5 0.7976190 72 4 0.753021 125 3 0.766314 53 5 0.659722 44 4 0.7398504 175 6 0.785287 103 3 0.873898 60 4 0.698101 96 4 0.7862158 153 6 0.8019128 147 6 0.748573 277 6 0.5179433 115 5 0.6641414 75 4 0.6450216 66 4 0.622222 38 3 0.5947509 142 6 0.6228114 135 6 0.876148 152 3 0.6298786 166 4 0.7761111 132 4 0.6949461 139 3 0.7169399 112 3 0.8949356 0.8006185 0.749255 0.834784 0.836335 0.864960 0.846068 0.8652907 0.7738399 0.867625 0.829177 0.7625645 0.917716 0.8662821 0.8034413 0.9076786 0.8474189 0.8282359 0.9157550 0.9211281 0.849274 0.9003571 0.823456 0.8664286 0.7691667 0.8898901 0.8737022 0.9105556 0.7818231 0.883686 0.9238351 0.8926782 0.6060652 0.6027576 0.70311688 0.8653333 0.7558425 0.7703005 0.9220875 0.8741765 0.9309500 0.8905056 0.8991639 3 0.829647 0.844765 -0.01837743 6 0.712884 0.756105 -4.3221e-02 0.96716371 0.02813329 weaklyHypometh 1.00000 0.611593 insignificant 0.92347105 0.01936209 weaklyHypometh 1.00000 0.716057 insignificant -0.01386755 0.58580239 lowCoverage 1.00000 lowCoverage 0.829647 0.6760070 0.1354953 6 0.712884 0.5783639 0.1345202 1.4987e-06 9.9857e-01 weaklyHypermeth 1.7227e-05 1.0000e+00 weaklyHypermeth 5.0119e-02 9.8799e-01 insignificant 3.1721e-01 1.0000e+00 insignificant 0.1344691 3.0455e-04 lowCoverage 6.9215e-03 lowCoverage 0.829647 0.884451 -0.03958760 4 0.712884 0.749225 -0.0363413 9.5158e-01 8.0590e-03 lowCoverage 1.0000e+00 1.9987e-01 lowCoverage 8.8883e-01 2.1411e-03 lowCoverage 1.0000e+00 1.0706e-01 lowCoverage 0.0068130 8.8664e-01 lowCoverage 1.0000e+00 lowCoverage 0.844765 0.6760070 0.15238901 6 0.756105 0.5783639 1.7774e-01 3.1405e-06 9.9996e-01 weaklyHypermeth 3.5287e-05 1.0000e+00 weaklyHypermeth 1.4126e-02 9.9837e-01 weaklyHypermeth 1.0850e-01 1.0000e+00 insignificant 0.1483367 1.6075e-04 lowCoverage 4.7279e-03 lowCoverage 0.844765 0.884451 -0.02782459 4 0.756105 0.749225 0.00687962 7.0547e-01 2.1425e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.1050e-01 2.0638e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0206805 6.6162e-01 lowCoverage 1.00000000 lowCoverage 0.6760070 0.884451 -0.1719002 4 0.5783639 0.749225 -0.17086149 9.9043e-01 8.4449e-04 lowCoverage 1.0000e+00 8.9839e-03 lowCoverage 9.6904e-01 7.4033e-03 lowCoverage 1.0000e+00 9.0284e-02 lowCoverage -0.1276562 3.3673e-02 lowCoverage 0.31178298 lowCoverage chr1 41241344 41242344 1014 CTPS ENSG00000171793 0.842063 194 5 0.598462 90 5 0.747549 56 3 0.9100775 147 5 0.833333 40 3 0.829771 323 5 0.720000 70 5 0.895442 98 5 0.933333 35 3 0.764242 38 3 0.848399 164 5 0.200000 7 0 0.991667 75 3 0.733333 42 5 0.776000 77 3 1.000000 15 3 NA 0 0 0.750541 351 4 0.857568 217 5 0.879725 261 5 0.953846 41 3 0.8888889 9 0 0.860225 141 5 0.800000 89 5 0.67333 20 3 0.866574 194 5 0.859826 86 5 0.904762 30 4 0.8825606 185 5 0.882069 189 5 0.669033 190 5 0.940311 233 5 0.024687 207 5 0.0122449 168 5 0.0060606 379 5 NA 0 0 0.020592 228 5 0.1130290 343 5 0.721472 143 5 0.594441 238 5 0.706150 170 5 0.413670 301 3 0.668291 169 5 0.904605 0.534378 0.783924 0.9434461 0.869318 0.871318 0.772727 0.874158 0.885227 0.735021 0.891691 0.068182 0.988163 0.688636 0.897727 0.968537 NA 0.7146915 0.898778 0.889662 0.934441 0.882850 0.908537 0.931818 0.526515 0.913183 0.797925 0.9366883 0.886088 0.906718 0.854336 0.932395 0.03506636 0.0173933 0.0020661 NA 0.030048 0.1875219 0.8093221 0.807519 0.797035 0.715220 0.809041 1 0.842609 0.882018 -0.0478009 5 0.84936 0.71421 0.1351478 0.995334 1.2374e-01 insignificant 1 1.000000 insignificant 0.987212 0.0300889 weaklyHypometh 1 1.00000 insignificant -0.05311010 0.278192 lowCoverage 1 lowCoverage 0.842609 0.060377 0.77806749 5 0.849355 0.038501 0.8108540 1.3787e-47 1.0000e+00 hypermethylated 2.7574e-45 1.0000e+00 hypermethylated 6.7826e-11 1.0000e+00 hypermethylated 9.6894e-09 1.0000e+00 hypermethylated 0.7600196 3.8655e-14 lowCoverage 7.7309e-12 lowCoverage 0.842609 0.810970 0.0395907 5 0.849355 0.574140 0.27521510 1.2294e-05 0.95642408 weaklyHypermeth 8.7814e-04 1.00000 weaklyHypermeth 4.5992e-04 0.9917972 weaklyHypermeth 3.8326e-02 1.00000 weaklyHypermeth 0.1745377 3.3507e-02 lowCoverage 1.0000e+00 lowCoverage 0.882018 0.0603774 0.8227780 5 0.714207 0.038501 0.6757062 3.9997e-40 1.0000e+00 hypermethylated 7.9994e-38 1.0000e+00 hypermethylated 4.0315e-10 1.0000e+00 hypermethylated 6.7192e-08 1.0000e+00 hypermethylated 0.8131297 3.4725e-13 lowCoverage 3.4725e-10 lowCoverage 0.882018 0.810970 0.10157847 5 0.714207 0.574140 0.1400673 3.3839e-06 0.9999119 weaklyHypermeth 3.3839e-04 1.00000 weaklyHypermeth 6.1917e-05 1.000000 weaklyHypermeth 6.8797e-03 1 weaklyHypermeth 0.2276477 1.0992e-02 lowCoverage 0.68699319 lowCoverage 0.0603774 0.810970 -0.7461491 5 0.038501 0.574140 -0.535639 1.0000e+00 2.1672e-24 hypomethylated 1.0000e+00 1.0836e-21 hypomethylated 1.0000e+00 4.8536e-06 hypomethylated 1.00000000 6.1721e-04 hypomethylated -0.58548200 1.9324e-04 lowCoverage 0.0241544 lowCoverage chr1 41753744 41754744 1025 EDN2 ENSG00000127129 0.020443 740 14 0.088633 426 13 0.071001 385 15 0.0048935 741 11 0.035921 202 14 0.027589 700 15 0.036355 392 15 0.027550 358 15 0.018218 373 15 0.028758 279 14 0.040295 484 15 0.039964 331 14 0.022050 300 14 0.036045 130 7 0.024462 383 14 0.038375 261 13 0.0088235 227 8 0.054397 1259 14 0.087770 411 15 0.011899 631 15 0.054618 260 15 0.0072245 354 15 0.091298 416 14 0.069808 177 14 0.10489 689 15 0.023012 577 15 0.019574 447 13 0.074929 216 15 0.0320426 348 14 0.020922 571 15 0.020712 483 15 0.056282 662 15 0.000000 329 14 0.0062539 366 15 0.0000000 288 9 0.027778 213 11 0.071077 283 14 0.1467003 598 14 0.158412 1035 11 0.038004 851 14 0.041109 557 11 0.100023 691 11 0.084275 706 14 0.031914 0.031150 0.064730 0.0045547 0.037831 0.033043 0.035830 0.024759 0.019649 0.035438 0.051271 0.034748 0.025903 0.039832 0.031338 0.037323 0.0218192 0.0061279 0.022449 0.013021 0.081930 0.002775 0.053744 0.013459 0.051968 0.021781 0.032047 0.0214135 0.032591 0.020112 0.027129 0.085349 0.00053275 0.0053869 0.0007953 0.0022432 0.011903 0.0074203 0.0067278 0.012907 0.017548 0.013669 0.016523 11 0.024972 0.032506 -0.0066959 15 0.04902 0.10382 -0.0547978 0.990411 4.0628e-01 insignificant 1 1.000000 insignificant 0.994941 0.8718334 insignificant 1 1.00000 insignificant -0.01177050 0.281953 insignificant 1 insignificant 0.024975 0.007722 0.01884898 14 0.071747 0.095057 -0.0233100 1.3495e-02 1.0000e+00 weaklyHypermeth 2.0762e-01 1.0000e+00 insignificant 1.7776e-03 1.0000e+00 weaklyHypermeth 4.9379e-02 1.0000e+00 weaklyHypermeth -0.0057961 8.1973e-01 insignificant 1.0000e+00 insignificant 0.024975 0.012249 0.0131420 14 0.071747 0.116206 -0.04445860 5.0780e-01 0.99174066 insignificant 1.0000e+00 1.00000 insignificant 3.8875e-01 0.9998593 insignificant 1.0000e+00 1.00000 insignificant -0.0481927 9.3773e-02 insignificant 1.0000e+00 insignificant 0.031966 0.0067862 0.0244838 14 0.050035 0.066207 -0.0161720 5.2482e-04 1.0000e+00 weaklyHypermeth 1.0623e-02 1.0000e+00 weaklyHypermeth 3.3327e-04 1.0000e+00 weaklyHypermeth 1.3331e-02 1.0000e+00 weaklyHypermeth 0.0059744 8.2129e-01 insignificant 1.0000e+00 insignificant 0.031960 0.012259 0.02185463 14 0.047533 0.152826 -0.1052936 8.2232e-02 0.9926253 insignificant 1.0000e+00 1.00000 insignificant 1.9522e-01 0.998689 insignificant 1.0000e+00 1 insignificant -0.0364222 1.8363e-01 insignificant 1.00000000 insignificant 0.0081849 0.012503 -0.0072203 14 0.101025 0.148189 -0.047164 9.9999e-01 1.1278e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.0000e+00 4.0604e-01 insignificant 1.00000000 1.0000e+00 insignificant -0.04239654 2.2281e-01 insignificant 1.0000000 insignificant chr1 43172844 43173844 1048 ENSG00000219729 0.937778 32 4 0.930677 155 6 0.840483 154 4 0.8694444 55 4 1.000000 7 1 0.709333 38 1 NA 0 0 1.000000 8 1 1.000000 1 0 1.000000 10 2 1.000000 24 2 1.000000 3 0 1.000000 7 0 1.000000 3 0 0.750000 7 0 1.000000 2 0 NA 0 0 0.750000 5 0 1.000000 7 1 0.950000 13 0 1.000000 8 0 1.0000000 9 1 0.986111 63 6 0.541667 11 1 0.80417 31 2 0.930408 160 6 NA 0 0 0.875000 5 0 0.9444444 15 2 0.936660 145 6 0.918605 140 6 0.883929 25 3 0.942721 163 6 1.0000000 19 2 0.6614899 186 6 0.818182 13 1 0.950000 13 1 0.6997054 96 6 0.928571 10 1 0.969697 36 3 0.877273 27 2 0.666667 6 0 1.000000 26 2 0.800000 1.000000 0.500000 0.9500000 1.000000 0.880000 NA 1.000000 1.000000 1.000000 1.000000 1.000000 1.000000 1.000000 0.500000 1.000000 NA 0.0000000 1.000000 0.750000 1.000000 1.000000 0.916667 0.750000 0.733333 0.925926 NA 0.7500000 0.888889 0.875000 0.896552 1.000000 0.86666667 1.0000000 0.0000000 0.6363636 0.900000 0.1250000 0.7142857 0.818182 0.954545 0.666667 1.000000 0 0.924670 0.923203 0.0041162 3 0.92652 0.92140 0.0051201 0.577351 7.0840e-01 lowCoverage 1 1.000000 lowCoverage 0.331825 0.8823412 lowCoverage 1 1.00000 lowCoverage 0.03705570 0.431320 lowCoverage 1 lowCoverage 0.924670 0.867347 0.07917383 3 0.926522 0.840905 0.0856169 2.5062e-02 6.5621e-01 lowCoverage 3.4319e-01 1.0000e+00 lowCoverage 1.4534e-01 7.3859e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0845233 2.1958e-01 lowCoverage 1.0000e+00 lowCoverage 0.924670 0.923810 -0.0023710 1 0.926522 0.969987 -0.04346493 9.3639e-01 0.02947104 lowCoverage 1.0000e+00 1.00000 lowCoverage 5.9238e-01 0.0563070 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.0414315 5.4273e-01 lowCoverage 1.0000e+00 lowCoverage 0.923203 0.8673469 0.0716509 5 0.921402 0.840905 0.0804968 1.0150e-01 5.8888e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.0469e-01 5.5703e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0474676 5.1283e-01 lowCoverage 1.0000e+00 lowCoverage 0.923203 0.923810 -0.01659639 2 0.921402 0.969987 -0.0485851 9.9134e-01 0.0156935 lowCoverage 1.0000e+00 1.00000 lowCoverage 8.9107e-01 0.033702 lowCoverage 1.0000e+00 1 lowCoverage 0.0043758 9.5243e-01 lowCoverage 1.00000000 lowCoverage 0.8673469 0.923810 -0.1424450 2 0.840905 0.969987 -0.129082 9.9940e-01 3.3512e-02 lowCoverage 1.0000e+00 4.8568e-01 lowCoverage 9.8405e-01 6.6196e-02 lowCoverage 1.00000000 1.0000e+00 lowCoverage -0.04309182 6.1502e-01 lowCoverage 1.0000000 lowCoverage chr1 43969744 43970744 1070 ENSG00000210352 0.771147 365 11 0.634693 255 11 0.583643 143 8 0.8327117 197 10 0.751292 101 10 0.842446 530 11 0.606330 129 11 0.740965 192 11 0.645095 89 8 0.754266 110 6 0.809774 435 11 0.654385 68 4 0.818442 146 9 0.690972 48 6 0.710838 125 8 0.518797 78 4 0.8180087 35 4 0.685682 183 10 0.744957 197 9 0.757574 393 11 0.871301 98 8 0.7437747 90 9 0.682570 194 11 0.734989 86 6 0.78069 82 8 0.716393 343 11 0.753929 112 7 0.628788 34 2 0.7596358 129 11 0.737469 350 11 0.791385 311 11 0.728072 521 11 0.772167 229 10 0.6401066 152 11 0.7945988 376 11 0.662662 58 7 0.553535 147 11 0.7789855 330 11 0.767731 294 10 0.763346 273 9 0.785542 309 11 0.704230 252 8 0.741371 225 10 0.793608 0.736715 0.661412 0.8410321 0.815860 0.790775 0.657094 0.765243 0.724766 0.823803 0.829473 0.652549 0.825804 0.732411 0.730421 0.644401 0.7840172 0.6970000 0.782067 0.819612 0.801767 0.749238 0.701229 0.677583 0.797899 0.734416 0.764992 0.7540036 0.795352 0.779920 0.729862 0.714577 0.72862590 0.6531743 0.7231341 0.7189602 0.731359 0.6953903 0.7593609 0.801092 0.837061 0.750427 0.806667 2 0.781356 0.773191 0.0109768 11 0.73686 0.77355 -0.0366981 0.175339 4.1376e-01 insignificant 1 1.000000 insignificant 0.692889 0.2659538 insignificant 1 1.00000 insignificant -0.02548197 0.341375 insignificant 1 insignificant 0.781356 0.753870 0.03459284 11 0.736857 0.741039 -0.0041824 9.2128e-02 8.4862e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.6503e-01 9.6782e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0182583 6.9153e-01 insignificant 1.0000e+00 insignificant 0.781389 0.758315 -0.0079880 10 0.735980 0.767556 -0.03157537 4.0557e-01 0.02291712 weaklyHypometh 1.0000e+00 1.00000 insignificant 9.4915e-01 0.0082976 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.0338432 1.8204e-01 insignificant 1.0000e+00 insignificant 0.773191 0.7538700 0.0171246 11 0.773555 0.741039 0.0325157 2.3169e-01 9.6507e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.2321e-01 9.9936e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0437403 3.4355e-01 insignificant 1.0000e+00 insignificant 0.773095 0.758315 0.00076065 10 0.758458 0.767556 -0.0090974 5.6652e-01 0.0237439 inconclusive 1.0000e+00 1.00000 insignificant 9.5765e-01 0.074135 insignificant 1.0000e+00 1 insignificant -0.0083612 7.1004e-01 insignificant 1.00000000 insignificant 0.7540729 0.758315 -0.0158780 10 0.745997 0.767556 -0.021559 7.8320e-01 1.3652e-02 weaklyHypometh 1.0000e+00 2.2754e-01 insignificant 9.9381e-01 2.0476e-02 weaklyHypometh 1.00000000 5.3884e-01 insignificant -0.05210154 2.5863e-01 insignificant 1.0000000 insignificant chr1 44102844 44103844 1078 ENSG00000220282 0.846918 244 7 0.781193 121 6 0.720430 75 7 0.8674076 141 7 0.792708 57 5 0.837800 194 7 0.779470 93 7 0.805261 120 7 0.732164 81 7 0.757680 90 7 0.768007 195 7 0.777891 63 4 0.810249 75 7 0.922619 26 4 0.812946 95 7 0.897619 68 5 0.8802885 71 5 0.833205 125 7 0.937425 138 7 0.808001 222 7 0.812500 30 4 0.9357143 42 4 0.801115 125 7 0.855556 53 5 0.97222 33 2 0.804521 182 7 0.879692 64 4 0.888889 37 4 0.8538365 107 7 0.847036 144 6 0.639336 134 7 0.831950 294 7 0.749814 114 7 0.7663265 78 6 0.8002482 181 7 0.856892 70 4 0.754762 63 4 0.8046420 174 7 0.846857 202 7 0.838465 232 7 0.866882 169 7 0.818477 142 7 0.841963 175 7 0.885261 0.758176 0.794107 0.9047036 0.934756 0.869444 0.845553 0.885911 0.805734 0.824403 0.812588 0.841696 0.865965 0.902205 0.862916 0.847387 0.9128518 0.8587903 0.926863 0.840788 0.737065 0.930967 0.850672 0.929400 0.980967 0.821946 0.900502 0.8179881 0.856375 0.893936 0.846127 0.872169 0.76449112 0.7762485 0.7788967 0.8154666 0.897561 0.8134266 0.8854849 0.896161 0.901687 0.858995 0.887903 3 0.829991 0.853815 -0.0194497 7 0.84884 0.77908 0.0697543 0.831835 1.0446e-01 insignificant 1 1.000000 insignificant 0.973501 0.0348181 weaklyHypometh 1 1.00000 insignificant -0.02506651 0.370597 insignificant 1 insignificant 0.829917 0.783824 0.04819994 7 0.832042 0.827065 0.0049771 1.4045e-02 8.4882e-01 weaklyHypermeth 2.1280e-01 1.0000e+00 insignificant 2.8215e-01 9.5544e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0296833 1.8729e-01 insignificant 1.0000e+00 insignificant 0.830057 0.859783 -0.0301675 7 0.854264 0.827512 0.02675211 9.9892e-01 0.10909150 insignificant 1.0000e+00 1.00000 insignificant 9.9113e-01 0.1147158 insignificant 1.0000e+00 1.00000 insignificant -0.0240647 1.3360e-01 insignificant 1.0000e+00 insignificant 0.855761 0.7838235 0.0650813 7 0.837871 0.827065 0.0108057 1.1393e-02 9.9610e-01 weaklyHypermeth 1.8022e-01 1.0000e+00 insignificant 6.9958e-02 9.9901e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0547498 7.7176e-02 insignificant 1.0000e+00 insignificant 0.853344 0.859783 -0.01061578 7 0.754538 0.827512 -0.0729748 8.8601e-01 0.3968260 insignificant 1.0000e+00 1.00000 insignificant 5.1711e-01 0.731577 insignificant 1.0000e+00 1 insignificant 0.0010018 9.6869e-01 insignificant 1.00000000 insignificant 0.7831858 0.860566 -0.0794608 7 0.805448 0.868451 -0.063003 9.9974e-01 1.4039e-02 weaklyHypometh 1.0000e+00 2.3014e-01 insignificant 9.9971e-01 1.1159e-01 insignificant 1.00000000 1.0000e+00 insignificant -0.05374797 2.1569e-02 weaklyHypometh 0.5392338 insignificant chr1 44123344 44124344 1081 ENSG00000220282 0.309297 204 5 0.289195 86 5 0.147015 144 5 0.1470588 52 3 0.203205 56 5 0.254347 147 5 0.383269 113 5 0.201991 81 5 0.159259 117 5 0.241841 90 5 0.189314 179 5 0.366667 88 5 0.163474 129 5 NA 0 0 0.298949 126 5 0.274038 73 5 0.1141106 117 5 0.137255 51 3 0.237037 85 3 0.212450 239 5 0.292885 52 4 0.1045455 43 4 0.257205 141 5 0.276740 45 5 0.26667 29 3 0.192143 163 5 0.328508 62 5 0.225714 29 2 0.2743590 44 3 0.154005 146 5 0.203158 127 5 0.320156 301 5 0.865738 89 5 0.9046154 59 5 0.8000000 147 5 0.600253 48 5 0.833788 50 5 0.6630848 85 5 0.332941 231 5 0.160673 147 3 0.021864 92 3 0.053115 185 3 0.267943 127 5 0.227575 0.212478 0.132506 0.1970190 0.139811 0.210523 0.296916 0.137444 0.146696 0.210881 0.171549 0.349616 0.114425 NA 0.211864 0.269868 0.1284519 0.1621045 0.116921 0.169721 0.171826 0.094771 0.201431 0.194079 0.195806 0.148273 0.293261 0.0737628 0.251550 0.100342 0.143951 0.251512 0.87526502 0.9502262 0.9346405 0.6131907 0.831689 0.7322173 0.2544197 0.156111 0.055568 0.075699 0.196554 3 0.195682 0.214890 -0.0160050 5 0.22078 0.24996 -0.0291791 0.855675 1.9278e-01 insignificant 1 1.000000 insignificant 0.561041 0.5813833 insignificant 1 1.00000 insignificant -0.01345754 0.614283 lowCoverage 1 lowCoverage 0.195682 0.832636 -0.62496696 5 0.220783 0.813972 -0.5931888 9.9999e-01 1.3020e-43 hypomethylated 1.0000e+00 1.3020e-40 hypomethylated 9.9996e-01 3.0640e-12 hypomethylated 1.0000e+00 3.0640e-09 hypomethylated -0.5500302 2.8785e-05 lowCoverage 1.4983e-03 lowCoverage 0.195682 0.157289 0.0113760 4 0.220783 0.242662 -0.02187895 1.2853e-02 0.01939207 lowCoverage 6.1203e-01 1.00000 lowCoverage 1.1237e-02 0.5815832 lowCoverage 5.6480e-01 1.00000 lowCoverage 0.0605757 3.7936e-01 lowCoverage 1.0000e+00 lowCoverage 0.214890 0.8326360 -0.6025763 5 0.249962 0.813972 -0.5640097 9.9244e-01 2.9762e-36 hypomethylated 1.0000e+00 2.9762e-33 hypomethylated 9.9711e-01 9.5584e-10 hypomethylated 1.0000e+00 9.5584e-07 hypomethylated -0.5365727 2.7581e-05 lowCoverage 1.4516e-03 lowCoverage 0.214890 0.157289 0.01555130 4 0.249962 0.242662 0.0073001 1.6417e-02 0.0188876 lowCoverage 6.0805e-01 1.00000 lowCoverage 8.4986e-02 0.510375 lowCoverage 1.0000e+00 1 lowCoverage 0.0740333 2.9422e-01 lowCoverage 1.00000000 lowCoverage 0.8326360 0.157289 0.6857605 4 0.813972 0.242662 0.571310 4.7534e-16 1.0000e+00 lowCoverage 4.7534e-13 1.0000e+00 lowCoverage 3.5573e-07 1.0000e+00 lowCoverage 0.00035573 1.0000e+00 lowCoverage 0.61060599 4.1953e-05 lowCoverage 0.0059934 lowCoverage chr1 44661544 44662544 1092 RNF220 ENSG00000187147 0.777036 362 5 0.680247 277 5 0.701516 253 5 0.8206258 145 5 0.883913 77 5 0.890996 271 5 0.824051 233 5 0.783795 183 5 0.770792 248 5 0.812905 203 5 0.814666 179 5 0.773180 133 5 0.700331 240 5 NA 0 0 0.767506 203 5 0.691091 134 5 0.7711675 133 5 0.689586 151 5 0.806384 176 5 0.826600 285 5 0.780677 96 5 0.7913636 83 5 0.764003 247 5 0.886946 106 5 0.69295 38 3 0.801093 328 5 0.804527 87 5 0.843868 73 5 0.8412527 243 5 0.866326 306 5 0.839956 328 5 0.788044 353 5 0.233241 241 5 0.1017870 145 5 0.0000000 212 3 0.379048 51 3 0.239916 68 5 0.2549376 311 5 0.841019 305 5 0.704659 361 5 0.805901 213 5 0.711850 352 5 0.595816 233 5 0.787158 0.691379 0.712200 0.8341313 0.899921 0.892405 0.830147 0.789110 0.780771 0.822473 0.824865 0.788514 0.724333 NA 0.788206 0.703434 0.7867857 0.7117785 0.825882 0.842694 0.771896 0.824139 0.767730 0.905218 0.723636 0.821202 0.826049 0.8633172 0.857006 0.880287 0.852409 0.798171 0.23758239 0.1491781 0.0096976 0.3932617 0.269304 0.2794295 0.8616562 0.720886 0.824901 0.745212 0.613768 5 0.783067 0.825175 -0.0420021 5 0.77634 0.81789 -0.0415546 0.999789 3.6468e-03 weaklyHypometh 1 1.000000 insignificant 0.996613 0.0120240 weaklyHypometh 1 1.00000 insignificant -0.03018625 0.157960 lowCoverage 1 lowCoverage 0.783067 0.206226 0.57403062 5 0.776339 0.165634 0.6107055 2.5798e-48 1.0000e+00 hypermethylated 6.4495e-46 1.0000e+00 hypermethylated 1.0004e-14 1.0000e+00 hypermethylated 3.3346e-12 1.0000e+00 hypermethylated 0.5767428 6.4754e-05 lowCoverage 3.0835e-03 lowCoverage 0.783067 0.754098 0.0299805 5 0.776339 0.731076 0.04526310 2.6882e-02 0.94530578 weaklyHypermeth 1.0000e+00 1.00000 insignificant 1.0122e-01 0.8774075 insignificant 1.0000e+00 1.00000 insignificant 0.0463818 3.5423e-01 lowCoverage 1.0000e+00 lowCoverage 0.825175 0.2062257 0.6157606 5 0.817894 0.165634 0.6522601 8.5556e-42 1.0000e+00 hypermethylated 2.1389e-39 1.0000e+00 hypermethylated 5.1498e-11 1.0000e+00 hypermethylated 1.7166e-08 1.0000e+00 hypermethylated 0.6069290 4.6508e-05 lowCoverage 2.3254e-03 lowCoverage 0.825175 0.754098 0.07311597 5 0.817894 0.731076 0.0868177 7.7028e-05 0.9996683 weaklyHypermeth 5.5020e-03 1.00000 weaklyHypermeth 6.9202e-03 0.996690 weaklyHypermeth 3.6422e-01 1 insignificant 0.0765681 1.5375e-01 lowCoverage 1.00000000 lowCoverage 0.2062257 0.754098 -0.5470639 5 0.165634 0.731076 -0.565442 1.0000e+00 3.3624e-18 hypomethylated 1.0000e+00 8.4060e-16 hypomethylated 1.0000e+00 4.0831e-08 hypomethylated 1.00000000 1.3610e-05 hypomethylated -0.53036095 3.2763e-05 lowCoverage 0.0059934 lowCoverage chr1 44722944 44723944 1093 RNF220 ENSG00000187147 0.544450 149 5 0.477317 90 5 0.755714 38 5 0.5493696 120 5 0.817143 43 2 0.586111 55 5 0.535000 40 2 0.570370 51 4 0.496032 30 2 0.640000 27 4 0.643360 92 5 0.900000 19 1 0.648458 51 5 0.637500 27 2 0.501282 30 2 0.302165 26 2 0.5588235 20 1 0.571501 150 5 0.726515 52 4 0.789773 52 5 0.500000 5 0 0.6666667 4 0 0.756078 102 5 0.746667 19 1 0.63117 32 2 0.668485 88 5 0.515942 30 1 0.333333 13 1 0.7495370 43 5 0.590784 66 4 0.540347 56 4 0.522619 42 5 0.531109 76 5 0.5015385 61 5 0.6800000 81 5 0.600000 11 0 0.342857 53 5 0.6488889 50 5 0.665924 133 5 0.637912 135 5 0.642738 129 5 0.598116 108 5 0.720602 129 5 0.706613 0.571950 0.737082 0.7867169 0.754407 0.724113 0.613830 0.725414 0.693516 0.702128 0.662080 0.893617 0.688462 0.704787 0.627114 0.320162 0.6631184 0.7490308 0.773856 0.770897 0.684269 0.332581 0.794952 0.801418 0.644377 0.719858 0.678716 NA 0.733452 0.755681 0.585291 0.639944 0.60912108 0.4631751 0.7659574 0.7872340 0.492401 0.7068558 0.7950090 0.740940 0.757588 0.624728 0.724882 0 0.678756 0.710000 -0.0051517 5 0.57565 0.58603 -0.0103852 0.817039 5.3965e-01 insignificant 1 1.000000 insignificant 0.699424 0.7035019 insignificant 1 1.00000 insignificant 0.01074192 0.823436 lowCoverage 1 lowCoverage 0.678756 0.626506 0.09287187 5 0.575646 0.469060 0.1065859 3.7646e-02 9.9768e-01 weaklyHypermeth 4.8264e-01 1.0000e+00 insignificant 1.1700e-01 9.7667e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0618119 3.1826e-01 lowCoverage 1.0000e+00 lowCoverage 0.677281 0.695584 -0.0343600 5 0.473401 0.608218 -0.13481653 9.2884e-01 0.07973070 insignificant 1.0000e+00 1.00000 insignificant 9.3234e-01 0.3351137 insignificant 1.0000e+00 1.00000 insignificant -0.0405141 2.8096e-01 lowCoverage 1.0000e+00 lowCoverage 0.710000 0.6265060 0.0970244 5 0.586031 0.469060 0.1169711 2.9118e-02 9.9793e-01 weaklyHypermeth 3.9887e-01 1.0000e+00 insignificant 6.4965e-02 9.7056e-01 insignificant 9.9600e-01 1.0000e+00 insignificant 0.0510700 4.2756e-01 lowCoverage 1.0000e+00 lowCoverage 0.710000 0.697306 -0.02495768 5 0.586031 0.727624 -0.1415924 8.8453e-01 0.1339964 insignificant 1.0000e+00 1.00000 insignificant 7.5928e-01 0.148297 insignificant 1.0000e+00 1 insignificant -0.0512560 2.3798e-01 lowCoverage 1.00000000 lowCoverage 0.6265060 0.697306 -0.1105630 5 0.469060 0.727624 -0.258564 9.9617e-01 7.2530e-02 insignificant 1.0000e+00 8.7705e-01 insignificant 9.7710e-01 8.3500e-02 insignificant 1.00000000 1.0000e+00 insignificant -0.10232603 1.0200e-01 lowCoverage 1.0000000 lowCoverage chr1 45681244 45682244 1114 ENSG00000219097 0.771658 152 6 0.705222 163 7 0.652146 63 6 0.7579713 139 7 0.695707 100 6 0.852400 211 9 0.688889 42 5 0.769953 136 8 0.624459 72 7 0.727778 32 4 0.741810 221 9 0.679167 23 2 0.841880 78 7 0.832639 38 4 0.658820 67 5 0.666667 16 0 1.0000000 1 0 0.666739 212 7 0.860557 100 5 0.817933 202 8 0.740741 25 2 0.7027778 15 1 0.778231 78 6 0.608333 39 5 0.72392 57 3 0.753555 145 7 0.776641 90 7 0.571429 25 3 0.6448757 128 7 0.739372 120 7 0.742250 123 7 0.855090 202 8 0.752803 191 7 0.6376751 80 5 0.7229798 99 6 0.805556 18 1 0.816102 112 6 0.7200436 104 7 0.844848 121 5 0.742806 117 5 0.784737 128 5 0.792180 99 4 0.829035 96 5 0.631107 0.595636 0.540776 0.5897149 0.613782 0.691725 0.554637 0.718157 0.694222 0.592949 0.643518 0.706895 0.687048 0.671296 0.633394 0.529915 NA 0.6408118 0.754030 0.710451 0.752137 0.749959 0.634310 0.508547 0.625390 0.660719 0.618557 0.6000883 0.613710 0.699892 0.651886 0.662607 0.64451140 0.4467278 0.5959758 0.8073420 0.659438 0.6630216 0.6379176 0.660747 0.602227 0.659214 0.725540 0 0.737911 0.767908 -0.0115993 7 0.69279 0.70540 -0.0126132 0.940107 1.8602e-01 insignificant 1 1.000000 insignificant 0.904254 0.2779166 insignificant 1 1.00000 insignificant 0.03085152 0.327107 insignificant 1 insignificant 0.739215 0.692053 0.02236424 6 0.737590 0.743255 -0.0056656 1.9439e-01 2.4255e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.5270e-01 5.0451e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0080932 8.1574e-01 insignificant 1.0000e+00 insignificant 0.742092 0.680927 -0.0086737 5 0.811349 0.802496 0.00885242 2.7267e-01 0.13537080 insignificant 1.0000e+00 1.00000 insignificant 7.5900e-01 0.1822506 insignificant 1.0000e+00 1.00000 insignificant -0.0481015 1.0045e-01 lowCoverage 1.0000e+00 lowCoverage 0.773077 0.6920530 0.0354472 6 0.769531 0.743255 0.0262761 1.2560e-01 8.3295e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.5104e-01 7.5387e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0227583 5.2796e-01 insignificant 1.0000e+00 insignificant 0.776596 0.680927 -0.00185970 5 0.829818 0.802496 0.0273216 1.7882e-01 0.4685857 insignificant 1.0000e+00 1.00000 insignificant 7.2749e-01 0.589279 insignificant 1.0000e+00 1 insignificant -0.0789531 1.6141e-02 lowCoverage 0.79822262 lowCoverage 0.6938436 0.680927 -0.0441473 5 0.784248 0.802496 -0.018249 5.2217e-01 2.3501e-02 weaklyHypometh 1.0000e+00 3.4727e-01 insignificant 8.2772e-01 9.2234e-02 insignificant 1.00000000 1.0000e+00 insignificant -0.05619475 1.1677e-01 lowCoverage 1.0000000 lowCoverage chr1 45796244 45797244 1118 AKR1A1 ENSG00000117448 0.746342 271 9 0.737543 300 9 0.698852 197 8 0.8024681 307 9 0.747910 149 7 0.653128 458 9 0.715307 181 9 0.722567 202 8 0.734804 153 9 0.722891 218 8 0.751675 402 9 0.687183 115 7 0.823086 198 7 0.746312 100 6 0.688805 222 8 0.648965 77 5 0.8018604 488 5 0.797839 319 9 0.754672 198 8 0.684415 386 9 0.708783 119 9 0.7089996 134 8 0.735691 203 9 0.719900 199 9 0.80116 113 7 0.749578 267 8 0.716530 142 7 0.741071 156 8 0.7871815 194 9 0.799837 305 9 0.737592 258 8 0.740679 432 9 0.671676 253 9 0.7623454 129 8 0.5219736 185 7 0.539782 49 5 0.727537 241 9 0.7322699 283 9 0.767373 263 9 0.855061 247 8 0.786368 266 9 0.770460 186 7 0.805015 279 9 0.800593 0.731396 0.723158 0.8238066 0.746063 0.768320 0.720909 0.744786 0.760016 0.798547 0.776186 0.732203 0.806089 0.789121 0.729425 0.723098 0.8470019 0.8137738 0.771112 0.747265 0.722531 0.747485 0.733060 0.771208 0.841511 0.781835 0.743719 0.7653753 0.808600 0.828490 0.784722 0.747874 0.68490431 0.7743288 0.5975073 0.5760827 0.741634 0.7387093 0.8124303 0.822929 0.789741 0.807574 0.788326 5 0.780458 0.788660 0.0054267 9 0.74487 0.76788 -0.0230135 0.272486 5.7335e-01 insignificant 1 1.000000 insignificant 0.396151 0.1648491 insignificant 1 1.00000 insignificant -0.01225192 0.405027 insignificant 1 insignificant 0.780117 0.723684 0.05879417 9 0.722607 0.668356 0.0542509 3.6873e-03 9.8989e-01 weaklyHypermeth 6.3573e-02 1.0000e+00 weaklyHypermeth 3.4539e-03 9.9604e-01 weaklyHypermeth 8.8562e-02 1.0000e+00 weaklyHypermeth 0.0740673 1.4430e-01 insignificant 1.0000e+00 insignificant 0.780186 0.809831 -0.0242069 8 0.728201 0.764319 -0.03611760 9.9427e-01 0.03218456 weaklyHypometh 1.0000e+00 1.00000 insignificant 9.9961e-01 0.0081403 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.0635242 1.0841e-02 weaklyHypometh 4.0977e-01 insignificant 0.788660 0.7243196 0.0538747 9 0.767881 0.735192 0.0326895 1.4795e-02 9.5839e-01 weaklyHypermeth 2.2416e-01 1.0000e+00 insignificant 1.4155e-02 9.9629e-01 weaklyHypermeth 2.6708e-01 1.0000e+00 insignificant 0.0863192 9.8367e-02 insignificant 1.0000e+00 insignificant 0.788576 0.810331 -0.02752493 8 0.742090 0.793687 -0.0515972 9.9413e-01 0.0081074 weaklyHypometh 1.0000e+00 1.00000 insignificant 9.9211e-01 0.014659 weaklyHypometh 1.0000e+00 1 insignificant -0.0512723 2.8445e-02 weaklyHypometh 1.00000000 insignificant 0.7234416 0.809831 -0.0858890 8 0.635192 0.764319 -0.129127 1.0000e+00 8.2779e-05 weaklyHypometh 1.0000e+00 2.8544e-03 weaklyHypometh 1.0000e+00 2.0907e-04 weaklyHypometh 1.00000000 1.7423e-02 weaklyHypometh -0.13759152 2.1268e-02 weaklyHypometh 0.5392338 insignificant chr1 46412617 46413617 1133 TSPAN1 ENSG00000117472 0.871768 209 6 0.787603 118 5 0.798313 151 5 0.8346244 231 6 0.791296 82 5 0.909180 365 5 0.829685 83 5 0.808984 118 5 0.784606 158 5 0.820408 131 5 0.872280 141 5 0.796305 109 5 0.697527 185 5 0.783333 78 3 0.868547 127 5 0.693333 46 5 0.9225806 67 3 0.604019 319 5 0.877249 88 5 0.823864 243 5 0.921769 55 3 0.6498431 112 3 0.732242 168 5 0.904085 83 5 0.76178 65 5 0.898629 156 5 0.822868 106 5 0.609890 68 3 0.8438742 122 4 0.795567 170 5 0.913428 128 5 0.771282 321 5 0.096060 189 5 0.1762427 89 3 0.0000000 137 4 0.272727 28 2 0.370868 147 5 0.1610259 161 5 0.755867 146 5 0.832723 229 6 0.783664 204 6 0.873253 119 4 0.828115 218 6 0.888998 0.742522 0.785169 0.8631445 0.724087 0.870818 0.780566 0.754310 0.793143 0.778488 0.784993 0.670320 0.688087 0.807160 0.824304 0.697872 0.8026539 0.7190161 0.844996 0.802837 0.809524 0.675497 0.798208 0.840103 0.787798 0.924200 0.785354 0.8458811 0.791166 0.777877 0.906795 0.798666 0.13129296 0.1218508 0.1123525 0.3101225 0.135197 0.1643114 0.7928701 0.785480 0.794253 0.852652 0.804565 3 0.788783 0.790219 -0.0067621 5 0.84023 0.79677 0.0434605 0.394286 8.1896e-01 insignificant 1 1.000000 insignificant 0.906952 0.7556363 insignificant 1 1.00000 insignificant 0.00667065 0.847637 lowCoverage 1 lowCoverage 0.788506 0.137150 0.65622387 5 0.817411 0.164275 0.6531355 9.8446e-62 1.0000e+00 hypermethylated 9.8446e-59 1.0000e+00 hypermethylated 9.7217e-14 1.0000e+00 hypermethylated 2.4304e-11 1.0000e+00 hypermethylated 0.6292879 2.7117e-05 lowCoverage 1.4983e-03 lowCoverage 0.788278 0.784934 -0.0043855 5 0.807813 0.813162 -0.00534937 6.6521e-01 0.63482702 insignificant 1.0000e+00 1.00000 insignificant 6.0877e-01 0.5389739 insignificant 1.0000e+00 1.00000 insignificant -0.0059490 8.2752e-01 lowCoverage 1.0000e+00 lowCoverage 0.790084 0.1371505 0.6513013 5 0.767742 0.164275 0.6034663 5.5021e-42 1.0000e+00 hypermethylated 1.8340e-39 1.0000e+00 hypermethylated 3.5020e-10 1.0000e+00 hypermethylated 6.7192e-08 1.0000e+00 hypermethylated 0.6226173 5.8152e-06 lowCoverage 3.6982e-04 lowCoverage 0.790187 0.784934 0.00920468 5 0.770699 0.813162 -0.0424634 7.5261e-01 0.4492325 insignificant 1.0000e+00 1.00000 insignificant 5.6113e-01 0.700033 insignificant 1.0000e+00 1 insignificant -0.0126196 7.3112e-01 lowCoverage 1.00000000 lowCoverage 0.1365462 0.784934 -0.6581050 5 0.149988 0.813162 -0.663174 1.0000e+00 1.2071e-27 hypomethylated 1.0000e+00 1.2071e-24 hypomethylated 1.0000e+00 2.4056e-07 hypomethylated 1.00000000 6.0141e-05 hypomethylated -0.63523690 1.9598e-05 lowCoverage 0.0059934 lowCoverage chr1 46523317 46524317 1136 RAD54L ENSG00000085999 0.872142 249 12 0.897566 321 12 0.753163 259 12 0.8417023 61 6 0.917535 150 12 0.940701 228 11 0.892213 136 7 0.886780 253 12 0.962281 132 8 0.961026 184 10 0.913324 454 12 0.927133 113 7 0.886051 353 12 NA 0 0 0.945028 259 12 0.929398 64 7 0.8925565 70 6 0.906352 84 4 0.898455 317 12 0.923403 217 10 0.901800 133 10 0.7916667 25 0 0.926018 172 12 0.949663 83 9 0.93056 23 0 0.947611 405 12 0.909966 132 9 0.943590 50 4 0.9500597 370 12 0.966046 398 12 0.930992 390 12 0.936301 341 12 0.963371 308 10 0.9630295 252 12 0.8433962 254 10 0.981818 46 6 0.952513 97 8 0.8899641 241 10 0.963384 135 10 0.938975 301 12 0.928333 75 7 0.893731 101 7 0.934571 117 10 0.863231 0.907510 0.763806 0.8412467 0.927216 0.936594 0.895536 0.915037 0.962610 0.954453 0.915449 0.915345 0.908312 NA 0.939869 0.918593 0.8686160 0.8975122 0.915428 0.937235 0.920106 0.780347 0.910570 0.916051 0.946050 0.951243 0.905690 0.9313917 0.933273 0.955685 0.924322 0.933209 0.96333820 0.9413309 0.7301795 0.9884393 0.940765 0.8957962 0.9575524 0.922426 0.906779 0.908291 0.904055 2 0.909580 0.932990 -0.0245714 12 0.90006 0.93768 -0.0376206 0.998754 3.0728e-04 weaklyHypometh 1 0.153638 insignificant 0.994012 0.0016107 weaklyHypometh 1 0.80537 insignificant -0.02122547 0.222625 insignificant 1 insignificant 0.909580 0.909850 0.00048901 12 0.900061 0.926064 -0.0260028 8.9712e-01 1.3339e-06 inconclusive 1.0000e+00 4.4465e-04 inconclusive 9.9988e-01 8.7858e-06 inconclusive 1.0000e+00 4.3929e-03 inconclusive -0.0298850 2.5873e-01 insignificant 1.0000e+00 insignificant 0.909580 0.934156 -0.0221293 10 0.900061 0.940082 -0.04002108 9.4105e-01 0.01305345 weaklyHypometh 1.0000e+00 1.00000 insignificant 9.5930e-01 0.0245916 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.0293353 8.3376e-02 insignificant 1.0000e+00 insignificant 0.932990 0.9098497 0.0231104 12 0.937682 0.926064 0.0116179 7.1126e-01 7.2370e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8538e-01 6.3707e-03 inconclusive 1.0000e+00 1.0000e+00 insignificant -0.0086595 7.4270e-01 insignificant 1.0000e+00 insignificant 0.932990 0.934156 0.00285208 10 0.937682 0.940082 -0.0024005 5.2424e-01 0.5977958 insignificant 1.0000e+00 1.00000 insignificant 5.7421e-01 0.775621 insignificant 1.0000e+00 1 insignificant -0.0081098 6.4519e-01 insignificant 1.00000000 insignificant 0.9098497 0.934156 -0.0249796 10 0.926064 0.940082 -0.014018 4.4157e-02 7.7530e-01 inconclusive 1.0000e+00 1.0000e+00 insignificant 3.8836e-02 8.5525e-01 inconclusive 1.00000000 1.0000e+00 insignificant 0.00054975 9.8281e-01 insignificant 1.0000000 insignificant chr1 47417217 47418217 1158 ENSG00000216834 0.193235 310 8 0.143735 603 8 0.264567 317 8 0.1782977 269 8 0.191044 374 8 0.328547 843 8 0.132950 487 8 0.161388 321 8 0.135811 338 8 0.191353 194 7 0.183883 615 8 0.163542 145 7 0.111607 205 7 0.172088 207 8 0.150928 405 8 0.237500 190 7 NA 0 0 0.145120 301 8 0.178300 517 8 0.266694 678 8 0.222436 206 8 0.0000000 6 0 0.147000 291 8 0.137500 245 8 0.17708 32 1 0.193504 696 8 0.198758 442 8 0.161923 280 8 0.1016722 643 8 0.139115 824 8 0.142194 840 8 0.166901 659 8 0.017431 489 8 0.0027100 364 8 0.0000000 367 8 0.000000 16 3 0.099723 538 9 0.0200809 741 8 0.269565 701 8 0.147638 529 8 0.176178 294 8 0.146820 456 8 0.170627 355 8 0.092474 0.076341 0.078942 0.0808039 0.053935 0.113977 0.064144 0.067991 0.074596 0.075963 0.099994 0.074847 0.059159 0.084505 0.056545 0.125971 NA 0.0777639 0.081595 0.082244 0.107995 0.063552 0.088520 0.048262 0.064758 0.072506 0.051077 0.0954321 0.058992 0.080246 0.075355 0.083805 0.01271797 0.0021946 0.0000000 0.0015313 0.036623 0.0180383 0.0870447 0.071813 0.068895 0.060838 0.076074 7 0.145258 0.143106 0.0077267 8 0.30937 0.15521 0.1541578 0.448648 9.6693e-01 insignificant 1 1.000000 insignificant 0.124310 0.9930385 insignificant 1 1.00000 insignificant 0.03681324 0.087856 insignificant 1 insignificant 0.144928 0.015507 0.13185023 8 0.211920 0.074910 0.1370103 9.3612e-15 9.0353e-01 weaklyHypermeth 4.2551e-13 1.0000e+00 weaklyHypermeth 1.2860e-04 9.9997e-01 weaklyHypermeth 5.1441e-03 1.0000e+00 weaklyHypermeth 0.1624963 3.3867e-06 weaklyHypermeth 2.6052e-04 weaklyHypermeth 0.144947 0.186724 0.0073066 8 0.233112 0.233752 -0.00063994 1.9820e-01 0.95504873 insignificant 1.0000e+00 1.00000 insignificant 2.0598e-01 0.9950670 insignificant 1.0000e+00 1.00000 insignificant 0.0036552 8.9163e-01 insignificant 1.0000e+00 insignificant 0.143300 0.0155070 0.1440892 8 0.197537 0.074910 0.1226277 1.6655e-11 3.7581e-01 weaklyHypermeth 6.4058e-10 1.0000e+00 weaklyHypermeth 1.4440e-03 9.6727e-01 weaklyHypermeth 3.7999e-02 1.0000e+00 weaklyHypermeth 0.1256830 7.0867e-05 weaklyHypermeth 3.3746e-03 weaklyHypermeth 0.142940 0.186375 -0.00033275 8 0.145138 0.148613 -0.0034750 5.6355e-01 0.7134261 insignificant 1.0000e+00 1.00000 insignificant 4.1136e-01 0.913050 insignificant 1.0000e+00 1 insignificant -0.0331581 2.6841e-01 insignificant 1.00000000 insignificant 0.0147410 0.186375 -0.1809010 8 0.017482 0.148613 -0.131131 5.9210e-01 1.4232e-09 weaklyHypometh 1.0000e+00 1.0948e-07 weaklyHypometh 9.5310e-01 5.1565e-02 insignificant 1.00000000 9.9904e-01 insignificant -0.15884111 5.6063e-04 weaklyHypometh 0.0513911 weaklyHypometh chr1 47599817 47600817 1167 CMPK1 ENSG00000162368 0.585861 223 9 0.610869 170 8 0.533054 153 9 0.4130236 169 9 0.604702 115 8 0.621433 143 8 0.624820 106 8 0.499081 126 8 0.554029 70 7 0.533609 78 7 0.577889 187 8 0.605288 74 6 0.587689 111 8 0.507339 94 8 0.531305 74 8 0.554674 47 4 0.5564010 422 7 0.604693 168 7 0.637374 89 7 0.665476 79 8 0.503333 37 3 0.7500000 6 0 0.424042 104 3 0.548327 48 4 0.49795 40 3 0.677453 238 9 0.666617 68 7 0.438095 36 5 0.7869048 108 8 0.641261 175 9 0.726100 173 8 0.618058 106 10 0.528552 111 8 0.5719577 58 8 0.4347572 134 8 0.716667 33 5 0.534111 97 7 0.6176037 202 9 0.520817 227 10 0.638270 212 10 0.624310 229 8 0.668004 140 7 0.560287 175 8 0.628090 0.485893 0.556890 0.4975188 0.570805 0.512912 0.571558 0.584754 0.631102 0.674385 0.565077 0.628689 0.735435 0.588949 0.600454 0.546820 0.5631817 0.6661019 0.699828 0.714398 0.544549 0.592529 0.462448 0.456710 0.457382 0.653715 0.637427 0.4776375 0.778921 0.638229 0.588129 0.595991 0.46492554 0.6441450 0.4172833 0.7125786 0.484404 0.6484682 0.6017432 0.634102 0.638000 0.762279 0.644201 0 0.608228 0.637083 -0.0245438 8 0.50847 0.65085 -0.1423790 0.802288 1.0091e-05 weaklyHypometh 1 0.010091 weaklyHypometh 0.805829 0.0931813 insignificant 1 1.00000 insignificant -0.03608151 0.354034 insignificant 1 insignificant 0.607967 0.567141 0.03227269 8 0.485602 0.503954 -0.0183524 5.3846e-02 8.5840e-01 insignificant 6.6477e-01 1.0000e+00 insignificant 3.1694e-01 7.2388e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0031559 9.4087e-01 insignificant 1.0000e+00 insignificant 0.609212 0.661224 -0.0394183 8 0.532889 0.576777 -0.04388794 9.9039e-01 0.03679923 weaklyHypometh 1.0000e+00 1.00000 insignificant 9.9683e-01 0.1107144 insignificant 1.0000e+00 1.00000 insignificant -0.0319071 3.2664e-01 insignificant 1.0000e+00 insignificant 0.636926 0.5685039 0.0515274 8 0.661628 0.539386 0.1222421 4.9133e-02 9.9735e-01 weaklyHypermeth 6.0658e-01 1.0000e+00 insignificant 6.2122e-01 9.6939e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0392374 4.6791e-01 insignificant 1.0000e+00 insignificant 0.637643 0.661241 -0.01434954 8 0.684186 0.582769 0.1014169 6.0705e-01 0.2050351 insignificant 1.0000e+00 1.00000 insignificant 9.3024e-01 0.233655 insignificant 1.0000e+00 1 insignificant 0.0041744 9.2645e-01 insignificant 1.00000000 insignificant 0.5687204 0.661554 -0.0716246 8 0.542416 0.614734 -0.072318 9.9792e-01 7.7678e-03 weaklyHypometh 1.0000e+00 1.3871e-01 insignificant 9.9877e-01 6.4875e-02 insignificant 1.00000000 1.0000e+00 insignificant -0.03506296 4.7739e-01 insignificant 1.0000000 insignificant chr1 48144817 48145817 1172 ENSG00000204018 0.764025 203 6 0.597448 159 7 0.727619 76 5 0.8336414 83 6 0.743537 38 2 0.826028 141 7 0.780087 42 2 0.906463 98 7 0.877438 78 5 0.833333 53 2 0.844454 222 8 0.909524 30 2 0.712493 137 5 1.000000 3 0 0.675884 62 5 0.792857 36 3 0.4108947 42 3 0.558617 224 5 0.776125 133 5 0.811764 143 6 0.897629 68 2 0.2551811 72 5 0.742488 77 3 0.907143 50 5 0.65974 100 6 0.840452 231 7 0.740368 77 5 0.888889 29 2 0.9063492 106 6 0.861970 231 7 0.855850 211 8 0.826229 161 7 0.456344 182 8 0.3393170 151 6 0.4768519 143 3 0.154512 73 4 0.681444 61 5 0.0806568 274 8 0.138525 300 7 0.258746 251 6 0.164064 180 6 0.054805 245 5 0.282241 244 7 0.733894 0.698816 0.701613 0.8138699 0.829493 0.869772 0.722630 0.879128 0.826293 0.927419 0.849168 0.801651 0.778127 NA 0.824597 0.893088 0.7165899 0.4964779 0.952528 0.859027 0.949805 0.062108 0.901714 0.956989 0.729854 0.894600 0.865172 0.8744724 0.840054 0.939086 0.828164 0.864074 0.21127300 0.1866688 NA 0.1840364 0.654779 0.0217154 0.0949813 0.271876 0.261542 0.111956 0.290635 2 0.753869 0.820948 -0.0599280 5 0.76442 0.79540 -0.0309709 0.932050 1.0679e-01 insignificant 1 1.000000 insignificant 0.653836 0.3870134 insignificant 1 1.00000 insignificant -0.01274579 0.836128 lowCoverage 1 lowCoverage 0.753869 0.244344 0.51224631 5 0.764425 0.358925 0.4055002 8.8495e-24 1.0000e+00 hypermethylated 7.3746e-22 1.0000e+00 hypermethylated 2.2032e-09 1.0000e+00 hypermethylated 2.2032e-07 1.0000e+00 hypermethylated 0.4042572 5.2311e-03 lowCoverage 1.4069e-01 lowCoverage 0.751140 0.165574 0.5689399 5 0.740295 0.200768 0.53952693 2.3187e-34 1.00000000 hypermethylated 2.3187e-31 1.00000 hypermethylated 1.3677e-12 1.0000000 hypermethylated 1.3677e-09 1.00000 hypermethylated 0.5894353 1.3586e-06 lowCoverage 3.3966e-04 lowCoverage 0.820948 0.2443439 0.5796905 6 0.795396 0.358925 0.4364711 3.8334e-19 1.0000e+00 hypermethylated 3.4256e-17 1.0000e+00 hypermethylated 1.1287e-07 1.0000e+00 hypermethylated 1.0261e-05 1.0000e+00 hypermethylated 0.4170030 3.6137e-03 weaklyHypermeth 1.0629e-01 insignificant 0.819648 0.165574 0.62836309 6 0.786575 0.200768 0.5858066 2.0082e-30 1.0000000 hypermethylated 2.0082e-27 1.00000 hypermethylated 9.4318e-12 1.000000 hypermethylated 9.4318e-09 1 hypermethylated 0.6021811 3.4048e-07 hypermethylated 0.00027192 hypermethylated 0.2322880 0.165574 0.0315690 6 0.310821 0.200768 0.110053 1.1247e-01 5.8391e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.4439e-01 9.0806e-01 insignificant 1.00000000 1.0000e+00 insignificant 0.18517815 1.0610e-01 insignificant 1.0000000 insignificant chr1 51844117 51845117 1216 ENSG00000218025 0.844501 92 5 0.723333 52 5 0.754921 58 5 0.8971041 138 5 0.657143 41 5 0.700717 113 5 0.666667 14 1 0.832168 84 5 0.977778 31 1 0.854167 40 5 0.801169 109 5 0.783333 18 0 0.875000 39 5 0.801818 51 5 0.795455 61 5 0.811429 28 5 1.0000000 11 1 0.771429 112 5 0.880000 48 5 0.812950 127 5 1.000000 6 0 0.8480186 55 5 0.746857 78 5 0.931429 28 4 0.85206 35 5 0.745330 75 5 0.803333 61 5 0.826471 33 1 0.7777778 53 5 0.673782 98 5 0.820363 91 5 0.741119 132 5 0.785714 37 5 0.7538462 62 5 0.5834821 60 4 1.000000 14 0 0.702473 44 5 0.8636364 72 5 0.827778 82 5 0.885441 134 5 0.834833 121 5 0.880000 83 5 0.859859 108 5 0.846250 0.742636 0.768697 0.9028591 0.681063 0.717493 0.678295 0.806839 0.971576 0.859981 0.809227 0.798450 0.883721 0.809302 0.809725 0.814618 1.0000000 0.7823920 0.888372 0.823820 1.000000 0.847889 0.758937 0.936213 0.854633 0.757731 0.813883 0.8303694 0.793282 0.691175 0.830213 0.753485 0.80066445 0.7710197 0.6860976 1.0000000 0.717864 0.8731501 0.8320413 0.889557 0.844840 0.888372 0.868013 0 0.819115 0.808054 0.0171053 5 0.80184 0.78278 0.0190641 0.196582 9.3142e-01 insignificant 1 1.000000 insignificant 0.569063 0.6323562 insignificant 1 1.00000 insignificant -0.00182463 0.955813 lowCoverage 1 lowCoverage 0.819258 0.760417 0.04374299 5 0.834866 0.798078 0.0367882 1.1753e-01 6.9267e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.5864e-01 5.9179e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0305288 6.3567e-01 lowCoverage 1.0000e+00 lowCoverage 0.819115 0.873106 -0.0556337 5 0.801840 0.862471 -0.06063101 9.9739e-01 0.01742762 weaklyHypometh 1.0000e+00 1.00000 insignificant 9.2751e-01 0.1294978 insignificant 1.0000e+00 1.00000 insignificant -0.0455281 6.2445e-02 lowCoverage 1.0000e+00 lowCoverage 0.808054 0.7595819 0.0249999 5 0.782776 0.757694 0.0250818 2.4049e-01 2.2843e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.1208e-01 3.5073e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0323534 6.2529e-01 lowCoverage 1.0000e+00 lowCoverage 0.808054 0.873106 -0.07047904 5 0.782776 0.862471 -0.0796951 9.9945e-01 0.0021883 weaklyHypometh 1.0000e+00 0.72942 insignificant 9.4659e-01 0.141698 insignificant 1.0000e+00 1 insignificant -0.0437034 1.4230e-01 lowCoverage 1.00000000 lowCoverage 0.7595819 0.873106 -0.1038857 5 0.757694 0.862471 -0.104777 9.5637e-01 2.8667e-03 weaklyHypometh 1.0000e+00 5.8860e-02 weaklyHypometh 7.5913e-01 1.2799e-01 insignificant 1.00000000 1.0000e+00 insignificant -0.07605685 2.5050e-01 lowCoverage 1.0000000 lowCoverage chr1 52801317 52802317 1243 ZCCHC11 ENSG00000134744 0.752890 112 8 0.602580 209 8 0.665241 106 8 0.6476719 185 8 0.744886 50 3 0.673079 391 8 0.722202 89 8 0.689797 158 8 0.580763 95 8 0.675833 90 8 0.693116 248 8 0.549632 39 1 0.728301 151 8 0.760254 75 8 0.646121 121 8 0.615319 41 2 0.7083333 10 1 0.661199 168 8 0.755285 144 8 0.733507 276 8 0.694368 45 4 0.6258741 86 7 0.634565 107 8 0.632372 59 7 0.77936 76 7 0.691066 221 8 0.732533 82 7 0.570238 40 3 0.6985851 140 8 0.700327 219 8 0.672852 204 8 0.715558 364 8 0.544306 135 8 0.4607143 99 8 0.5717363 184 8 0.733333 7 0 0.616449 114 8 0.6781471 243 8 0.674763 147 8 0.680060 159 8 0.678352 146 8 0.654897 82 5 0.700266 152 8 0.737633 0.591766 0.678237 0.6086873 0.779272 0.660166 0.723747 0.679909 0.638692 0.697150 0.678128 0.602402 0.748625 0.737897 0.725273 0.625300 0.6728373 0.5982494 0.748114 0.700793 0.691473 0.581231 0.646362 0.626393 0.747937 0.660886 0.746491 0.6364996 0.667180 0.656514 0.597064 0.684410 0.53173062 0.4711793 0.6046058 0.7145111 0.608937 0.6458866 0.6367111 0.696356 0.686934 0.662236 0.707029 2 0.694344 0.695679 -0.0067747 8 0.68680 0.69774 -0.0109395 0.764437 1.5310e-01 insignificant 1 1.000000 insignificant 0.461898 0.0563582 insignificant 1 1.00000 insignificant 0.00132604 0.950273 insignificant 1 insignificant 0.694344 0.631714 0.07733929 8 0.686804 0.609447 0.0773571 3.0335e-04 9.9999e-01 weaklyHypermeth 6.3198e-03 1.0000e+00 weaklyHypermeth 6.9775e-04 9.9999e-01 weaklyHypermeth 2.1144e-02 1.0000e+00 weaklyHypermeth 0.0795195 1.0563e-01 insignificant 1.0000e+00 insignificant 0.694344 0.679300 0.0027472 8 0.686804 0.681734 0.00507023 6.0329e-01 0.50622341 insignificant 1.0000e+00 1.00000 insignificant 6.0082e-01 0.4482952 insignificant 1.0000e+00 1.00000 insignificant 0.0026330 8.6520e-01 insignificant 1.0000e+00 insignificant 0.695679 0.6317136 0.0833924 8 0.697743 0.609447 0.0882966 4.5603e-05 9.9996e-01 weaklyHypermeth 1.0605e-03 1.0000e+00 weaklyHypermeth 7.1225e-04 9.9998e-01 weaklyHypermeth 2.2976e-02 1.0000e+00 weaklyHypermeth 0.0781934 1.1316e-01 insignificant 1.0000e+00 insignificant 0.695679 0.679300 0.01297462 8 0.697743 0.681734 0.0160098 2.1176e-01 0.7982881 insignificant 1.0000e+00 1.00000 insignificant 4.8053e-01 0.845609 insignificant 1.0000e+00 1 insignificant 0.0013069 9.4207e-01 insignificant 1.00000000 insignificant 0.6317136 0.679300 -0.0789579 8 0.609447 0.681734 -0.072287 9.9823e-01 2.6706e-03 weaklyHypometh 1.0000e+00 5.8056e-02 weaklyHypometh 9.9996e-01 3.8324e-03 weaklyHypometh 1.00000000 1.5326e-01 insignificant -0.07688651 1.1198e-01 insignificant 1.0000000 insignificant chr1 52987017 52988017 1249 ZYG11B ENSG00000162378 0.753996 86 5 0.574617 86 5 0.753571 32 5 0.8465546 76 5 0.766667 21 2 0.720158 60 5 0.671429 37 5 0.754545 54 5 0.554545 50 5 0.677778 35 3 0.797559 144 5 0.500000 5 0 0.645714 44 5 0.733333 30 5 0.666667 32 5 0.500000 7 0 1.0000000 1 0 0.752403 101 6 0.757143 34 5 0.661111 48 2 0.800000 15 0 0.7200000 17 3 0.740833 42 2 0.835714 29 3 0.65536 54 5 0.653846 64 5 0.818519 38 5 0.800000 16 0 0.8158333 46 5 0.727301 85 5 0.809078 74 5 0.729697 63 5 0.604291 66 5 0.6167832 61 5 0.6533333 70 5 0.625000 15 0 0.721591 70 5 0.6315789 83 5 0.673684 71 5 0.725982 65 5 0.668406 61 5 0.691667 48 5 0.659615 86 5 0.711896 0.566654 0.724147 0.8493039 0.768657 0.669156 0.662047 0.755088 0.671642 0.669154 0.757252 0.508639 0.637527 0.721393 0.666667 0.470149 NA 0.8002289 0.757996 0.647181 0.776119 0.686567 0.737500 0.831023 0.640325 0.649254 0.786070 0.7761194 0.836878 0.666856 0.722052 0.729263 0.58134792 0.5981630 0.6567164 0.5410448 0.708249 0.6378633 0.6724273 0.716306 0.658144 0.677239 0.665853 0 0.709776 0.721915 -0.0075133 5 0.72121 0.79510 -0.0738858 0.889700 3.7413e-01 insignificant 1 1.000000 insignificant 0.988349 0.2765896 insignificant 1 1.00000 insignificant -0.05445869 0.100359 lowCoverage 1 lowCoverage 0.711499 0.663014 0.05097393 5 0.758081 0.711089 0.0469923 9.3474e-02 9.8840e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.1533e-02 9.9887e-01 weaklyHypermeth 7.4167e-01 1.0000e+00 insignificant 0.0622933 6.0474e-02 lowCoverage 1.0000e+00 lowCoverage 0.710608 0.700906 0.0183421 5 0.709697 0.686623 0.02307437 3.2930e-01 0.65384157 insignificant 1.0000e+00 1.00000 insignificant 3.1722e-01 0.6163757 insignificant 1.0000e+00 1.00000 insignificant 0.0205188 4.8503e-01 lowCoverage 1.0000e+00 lowCoverage 0.721402 0.6630137 0.0585745 5 0.760948 0.711089 0.0498591 2.4468e-02 9.9308e-01 weaklyHypermeth 3.4954e-01 1.0000e+00 insignificant 5.9971e-03 9.9945e-01 weaklyHypermeth 1.3071e-01 1.0000e+00 insignificant 0.1167520 3.5510e-04 lowCoverage 1.3658e-02 lowCoverage 0.719852 0.700906 0.02581103 5 0.713137 0.686623 0.0265145 3.6806e-01 0.8771758 insignificant 1.0000e+00 1.00000 insignificant 1.9929e-01 0.975816 insignificant 1.0000e+00 1 insignificant 0.0749775 3.5774e-03 lowCoverage 0.35773520 lowCoverage 0.6620879 0.700906 -0.0297665 5 0.653307 0.686623 -0.033316 8.0650e-01 2.3615e-02 weaklyHypometh 1.0000e+00 3.4727e-01 insignificant 9.1572e-01 5.4251e-02 insignificant 1.00000000 1.0000e+00 insignificant -0.04177444 7.8417e-02 lowCoverage 1.0000000 lowCoverage chr1 53150917 53151917 1251 ZYG11A ENSG00000203995 0.633754 159 4 0.633798 234 5 0.611821 174 5 0.8991921 162 4 0.629715 60 4 0.771128 205 5 0.882596 67 4 0.827117 79 4 0.816818 42 4 0.933333 30 2 0.772546 100 4 0.808333 21 4 0.735735 57 4 0.646465 34 3 0.853544 71 4 0.854167 10 0 0.8891577 132 3 0.678220 122 5 0.872727 90 4 0.678800 243 5 0.866667 17 1 0.8750000 26 2 0.868883 117 5 0.738095 39 4 0.60667 34 4 0.852680 255 5 0.784127 34 4 0.895238 27 2 0.7844828 99 4 0.786668 198 5 0.798131 260 5 0.752147 294 5 0.606421 184 5 0.3988095 35 4 0.6510714 138 5 0.791667 17 2 0.505000 52 4 0.6744724 226 5 0.758265 138 5 0.789038 156 5 0.657962 189 5 0.837440 92 3 0.862334 124 5 0.741850 0.768180 0.756488 0.9379266 0.706621 0.860080 0.863872 0.831415 0.798391 0.913858 0.788916 0.811985 0.919861 0.686244 0.829609 0.868914 0.9404374 0.8078342 0.856997 0.861421 0.853184 0.887640 0.869767 0.812734 0.761423 0.843156 0.696415 0.9101124 0.773731 0.887144 0.871428 0.873558 0.70813176 0.5395934 0.8615811 0.8295880 0.662794 0.7113219 0.9167976 0.949949 0.871369 0.886012 0.857078 1 0.809751 0.826429 -0.0142912 5 0.65087 0.75868 -0.1078176 0.911552 1.1021e-01 insignificant 1 1.000000 insignificant 0.962556 0.4521757 insignificant 1 1.00000 insignificant -0.02928368 0.386184 lowCoverage 1 lowCoverage 0.809751 0.736196 0.08225155 5 0.650867 0.505790 0.1450767 8.1630e-05 9.9995e-01 weaklyHypermeth 1.7368e-03 1.0000e+00 weaklyHypermeth 2.2775e-03 1.0000e+00 weaklyHypermeth 6.1555e-02 1.0000e+00 weaklyHypermeth 0.1668748 2.9324e-02 lowCoverage 5.8648e-01 lowCoverage 0.810967 0.884120 -0.0701124 5 0.746610 0.751152 -0.00454213 8.0444e-01 0.02006884 weaklyHypometh 1.0000e+00 1.00000 insignificant 8.5512e-01 0.0490574 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.0095593 8.2950e-01 lowCoverage 1.0000e+00 lowCoverage 0.826429 0.7361963 0.0940713 5 0.758684 0.505790 0.2528943 5.8813e-06 9.9998e-01 weaklyHypermeth 1.4703e-04 1.0000e+00 weaklyHypermeth 3.9989e-04 1.0000e+00 weaklyHypermeth 1.4811e-02 1.0000e+00 weaklyHypermeth 0.1961585 1.5083e-02 lowCoverage 3.5912e-01 lowCoverage 0.826840 0.884120 -0.06859323 5 0.789357 0.751152 0.0382046 6.0832e-01 0.0507539 insignificant 1.0000e+00 1.00000 insignificant 7.9657e-01 0.133580 insignificant 1.0000e+00 1 insignificant 0.0197244 6.5616e-01 lowCoverage 1.00000000 lowCoverage 0.7380586 0.884120 -0.1611118 5 0.591053 0.751152 -0.160099 9.9997e-01 3.6376e-05 weaklyHypometh 1.0000e+00 1.3991e-03 weaklyHypometh 1.0000e+00 3.0660e-04 weaklyHypometh 1.00000000 2.0470e-02 weaklyHypometh -0.17643412 2.8478e-02 lowCoverage 0.6622707 lowCoverage chr1 53384017 53385017 1257 SLC1A7 ENSG00000162383 0.821887 354 8 0.637303 567 8 0.657664 323 9 0.8166484 344 9 0.803673 198 9 0.702545 511 8 0.638598 153 9 0.604078 417 8 0.749268 243 8 0.794844 333 9 0.749646 428 9 0.549291 112 8 0.677750 472 9 0.611222 260 9 0.731872 399 9 0.444444 49 5 0.3750000 19 0 0.339619 508 9 0.869126 397 9 0.803106 344 9 0.790323 123 8 0.4775568 237 8 0.854696 290 8 0.670267 156 6 0.82476 215 9 0.773479 653 9 0.683193 281 9 0.553919 102 8 0.8539786 443 9 0.709591 798 8 0.750871 549 8 0.829328 413 8 0.089067 478 8 0.0000000 162 8 0.1140351 290 9 0.081699 56 2 0.103196 421 8 0.1334533 587 8 0.744628 251 8 0.458804 254 8 0.605405 289 9 0.256777 281 8 0.379088 323 9 0.812664 0.728026 0.614474 0.7836021 0.802343 0.677602 0.744034 0.674525 0.690195 0.830665 0.834480 0.545042 0.731497 0.657966 0.689852 0.433420 0.2924282 0.3837559 0.864754 0.800754 0.829683 0.378895 0.791555 0.655263 0.818422 0.766331 0.655633 0.8026704 0.847742 0.705566 0.834240 0.802972 0.04722773 0.0000000 0.0043287 0.0404700 0.032334 0.0972153 0.6334083 0.297464 0.585439 0.287867 0.347918 7 0.707621 0.746770 -0.0374621 9 0.63885 0.73105 -0.0922031 0.999770 5.2667e-02 insignificant 1 1.000000 insignificant 0.999406 0.0105771 weaklyHypometh 1 1.00000 insignificant -0.06211739 0.206415 insignificant 1 insignificant 0.707575 0.063691 0.64214381 9 0.638849 0.127168 0.5116804 1.1675e-60 1.0000e+00 hypermethylated 3.8918e-58 1.0000e+00 hypermethylated 1.0282e-16 1.0000e+00 hypermethylated 5.1411e-14 1.0000e+00 hypermethylated 0.5819709 9.9462e-14 hypermethylated 1.4209e-11 hypermethylated 0.707704 0.424177 0.2757733 9 0.633791 0.557232 0.07655875 3.2721e-16 0.92201263 hypermethylated 6.5441e-14 1.00000 hypermethylated 5.3847e-07 0.9734383 hypermethylated 1.0769e-04 1.00000 hypermethylated 0.1799388 1.0378e-01 insignificant 1.0000e+00 insignificant 0.746711 0.0637230 0.6806611 9 0.708640 0.137766 0.5708738 6.5818e-52 1.0000e+00 hypermethylated 3.2909e-49 1.0000e+00 hypermethylated 1.3904e-16 1.0000e+00 hypermethylated 6.9519e-14 1.0000e+00 hypermethylated 0.6440883 3.2242e-11 hypermethylated 6.4484e-09 hypermethylated 0.746883 0.424177 0.31092632 9 0.718516 0.557232 0.1612837 6.9658e-16 0.9970476 hypermethylated 1.3932e-13 1.00000 hypermethylated 8.7360e-09 0.998790 hypermethylated 2.1840e-06 1 hypermethylated 0.2420562 4.3573e-02 weaklyHypermeth 1.00000000 insignificant 0.0637550 0.424177 -0.3714443 9 0.150290 0.557232 -0.406942 1.0000e+00 1.4341e-16 hypomethylated 1.0000e+00 2.3901e-14 hypomethylated 1.0000e+00 4.5659e-11 hypomethylated 1.00000000 2.2829e-08 hypomethylated -0.40203209 8.0322e-03 weaklyHypometh 0.2868645 insignificant chr1 53384117 53385117 1258 SLC1A7 ENSG00000162383 0.821887 354 8 0.637303 567 8 0.657664 323 9 0.8166484 344 9 0.803673 198 9 0.702545 511 8 0.638598 153 9 0.604078 417 8 0.749268 243 8 0.794844 333 9 0.749646 428 9 0.549291 112 8 0.677750 472 9 0.611222 260 9 0.731872 399 9 0.444444 49 5 0.3750000 19 0 0.339619 508 9 0.869126 397 9 0.803106 344 9 0.790323 123 8 0.4775568 237 8 0.854696 290 8 0.670267 156 6 0.82476 215 9 0.773479 653 9 0.683193 281 9 0.553919 102 8 0.8539786 443 9 0.709591 798 8 0.750871 549 8 0.829328 413 8 0.089067 478 8 0.0000000 162 8 0.1140351 290 9 0.081699 56 2 0.103196 421 8 0.1334533 587 8 0.744628 251 8 0.458804 254 8 0.605405 289 9 0.256777 281 8 0.379088 323 9 0.812664 0.728026 0.614474 0.7836021 0.802343 0.677602 0.744034 0.674525 0.690195 0.830665 0.834480 0.545042 0.731497 0.657966 0.689852 0.433420 0.2924282 0.3837559 0.864754 0.800754 0.829683 0.378895 0.791555 0.655263 0.818422 0.766331 0.655633 0.8026704 0.847742 0.705566 0.834240 0.802972 0.04722773 0.0000000 0.0043287 0.0404700 0.032334 0.0972153 0.6334083 0.297464 0.585439 0.287867 0.347918 7 0.707621 0.746770 -0.0374621 9 0.63885 0.73105 -0.0922031 0.999770 5.2667e-02 insignificant 1 1.000000 insignificant 0.999406 0.0105771 weaklyHypometh 1 1.00000 insignificant -0.06211739 0.206415 insignificant 1 insignificant 0.707575 0.063691 0.64214381 9 0.638849 0.127168 0.5116804 1.1675e-60 1.0000e+00 hypermethylated 3.8918e-58 1.0000e+00 hypermethylated 1.0282e-16 1.0000e+00 hypermethylated 5.1411e-14 1.0000e+00 hypermethylated 0.5819709 9.9462e-14 hypermethylated 1.4209e-11 hypermethylated 0.707704 0.424177 0.2757733 9 0.633791 0.557232 0.07655875 3.2721e-16 0.92201263 hypermethylated 6.5441e-14 1.00000 hypermethylated 5.3847e-07 0.9734383 hypermethylated 1.0769e-04 1.00000 hypermethylated 0.1799388 1.0378e-01 insignificant 1.0000e+00 insignificant 0.746711 0.0637230 0.6806611 9 0.708640 0.137766 0.5708738 6.5818e-52 1.0000e+00 hypermethylated 3.2909e-49 1.0000e+00 hypermethylated 1.3904e-16 1.0000e+00 hypermethylated 6.9519e-14 1.0000e+00 hypermethylated 0.6440883 3.2242e-11 hypermethylated 6.4484e-09 hypermethylated 0.746883 0.424177 0.31092632 9 0.718516 0.557232 0.1612837 6.9658e-16 0.9970476 hypermethylated 1.3932e-13 1.00000 hypermethylated 8.7360e-09 0.998790 hypermethylated 2.1840e-06 1 hypermethylated 0.2420562 4.3573e-02 weaklyHypermeth 1.00000000 insignificant 0.0637550 0.424177 -0.3714443 9 0.150290 0.557232 -0.406942 1.0000e+00 1.4341e-16 hypomethylated 1.0000e+00 2.3901e-14 hypomethylated 1.0000e+00 4.5659e-11 hypomethylated 1.00000000 2.2829e-08 hypomethylated -0.40203209 8.0322e-03 weaklyHypometh 0.2868645 insignificant chr1 54511017 54512017 1273 SSBP3 ENSG00000157216 0.676190 39 2 0.624821 152 5 0.468223 111 5 0.6272549 43 2 0.570833 76 5 0.741991 113 4 0.777024 91 5 0.451762 98 4 0.639205 104 5 0.797241 68 5 0.718685 224 5 0.714510 108 5 0.426187 148 5 0.637500 36 2 0.471688 135 5 0.654960 105 5 0.4371930 63 4 0.440000 42 2 0.483660 155 5 0.513420 82 4 0.657485 90 5 0.0563467 40 2 0.716688 74 5 0.544281 78 5 0.83641 43 2 0.663014 119 5 0.698684 105 5 0.755844 80 5 0.5488750 98 5 0.614454 160 5 0.449875 156 5 0.882027 79 4 0.021978 148 5 0.0570045 110 5 0.2711864 91 2 0.200000 18 2 0.258254 127 5 0.1911030 137 5 0.083333 65 5 0.129785 89 5 0.011111 41 2 0.146667 22 2 0.056667 31 2 0.692118 0.641462 0.506679 0.5143813 0.584684 0.687297 0.722980 0.438845 0.652573 0.701134 0.691997 0.651610 0.398612 0.631586 0.396926 0.541119 0.2868240 0.3755172 0.473892 0.423341 0.679542 0.110067 0.690782 0.499397 0.706037 0.622895 0.583510 0.8019481 0.613568 0.583913 0.426828 0.840495 0.00693444 0.0533502 0.4718878 0.3172414 0.179250 0.1656550 0.1143678 0.120912 0.024138 0.184828 0.099655 2 0.582037 0.602496 -0.0294181 5 0.59820 0.61398 -0.0157718 0.721696 2.4018e-01 insignificant 1 1.000000 insignificant 0.956125 0.0896811 insignificant 1 1.00000 insignificant -0.02504824 0.717731 lowCoverage 1 lowCoverage 0.582037 0.171157 0.41142797 5 0.598204 0.160676 0.4375282 1.2683e-23 1.0000e+00 hypermethylated 9.7560e-22 1.0000e+00 hypermethylated 3.8221e-11 1.0000e+00 hypermethylated 6.3702e-09 1.0000e+00 hypermethylated 0.4270299 9.0954e-06 lowCoverage 5.6846e-04 lowCoverage 0.582037 0.084677 0.4932759 4 0.598204 0.087159 0.51104523 1.3960e-28 1.00000000 lowCoverage 6.9801e-26 1.00000 lowCoverage 3.9760e-12 1.0000000 lowCoverage 1.9880e-09 1.00000 lowCoverage 0.5081050 4.9240e-10 lowCoverage 4.9240e-07 lowCoverage 0.602496 0.1711569 0.4263509 5 0.613976 0.160676 0.4533000 1.1104e-16 1.0000e+00 hypermethylated 6.9399e-15 1.0000e+00 hypermethylated 4.1854e-08 1.0000e+00 hypermethylated 4.1854e-06 1.0000e+00 hypermethylated 0.4520781 1.8300e-05 lowCoverage 1.0166e-03 lowCoverage 0.602496 0.084677 0.52742256 4 0.613976 0.087159 0.5268170 1.0402e-19 1.0000000 lowCoverage 3.4672e-17 1.00000 lowCoverage 9.9253e-10 1.000000 lowCoverage 4.9627e-07 1 lowCoverage 0.5331532 1.5764e-06 lowCoverage 0.00052547 lowCoverage 0.1711569 0.084677 0.0785709 4 0.160676 0.087159 0.073517 9.5073e-02 9.9297e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 2.6540e-01 9.3220e-01 lowCoverage 1.00000000 1.0000e+00 lowCoverage 0.08107510 1.3763e-01 lowCoverage 1.0000000 lowCoverage chr1 54700117 54701117 1296 SSBP3 ENSG00000157216 0.676845 198 5 0.557595 149 5 0.691439 133 5 0.8241986 186 5 0.681410 52 3 0.679407 205 5 0.565875 92 5 0.624973 154 5 0.626893 149 5 0.787525 113 5 0.720826 144 5 0.608157 69 5 0.398909 183 5 NA 0 0 0.553469 124 5 0.630476 51 5 0.6380342 68 5 0.526041 139 5 0.592641 93 5 0.686471 178 5 0.901190 67 5 0.5265762 101 5 0.610782 141 5 0.768919 107 5 0.75496 69 5 0.532602 224 5 0.605093 66 5 0.657407 55 5 0.5621101 137 5 0.641942 236 5 0.709708 200 5 0.759304 214 5 0.620512 143 5 0.7571163 102 5 0.6666667 174 5 0.588030 52 5 0.603136 93 5 0.6135791 199 5 0.637455 111 4 0.682725 191 5 0.628880 131 5 0.552605 223 5 0.696751 152 5 0.617052 0.565773 0.701857 0.7029413 0.660962 0.807161 0.634230 0.693919 0.602084 0.783848 0.722248 0.559324 0.478985 NA 0.522395 0.532629 0.5985128 0.5468424 0.624465 0.660768 0.880524 0.493873 0.672836 0.765244 0.730019 0.621512 0.706778 0.5453333 0.681000 0.638432 0.669276 0.702596 0.59468209 0.7221360 0.7360000 0.5804727 0.705832 0.5000283 0.6205290 0.590319 0.609266 0.529091 0.602566 5 0.643520 0.685220 -0.0438494 5 0.70338 0.68393 0.0194495 0.659531 1.3347e-01 insignificant 1 1.000000 insignificant 0.736830 0.0672770 insignificant 1 1.00000 insignificant -0.03389039 0.398248 lowCoverage 1 lowCoverage 0.643232 0.609436 0.03017053 5 0.661004 0.602609 0.0583955 5.4924e-04 6.9773e-04 weaklyHypermeth 1.0562e-02 6.9773e-02 weaklyHypermeth 2.6782e-02 3.5347e-03 weaklyHypermeth 4.9597e-01 5.8911e-01 insignificant -0.0061812 8.5732e-01 lowCoverage 1.0000e+00 lowCoverage 0.643985 0.590347 0.0748752 5 0.715616 0.625926 0.08969010 1.4428e-03 0.64212391 weaklyHypermeth 7.5936e-02 1.00000 weaklyHypermeth 7.8443e-03 0.3688573 weaklyHypermeth 4.3580e-01 1.00000 insignificant -0.0043577 8.9902e-01 lowCoverage 1.0000e+00 lowCoverage 0.685025 0.6094364 0.0732625 5 0.638776 0.602609 0.0361675 1.2073e-02 3.1848e-04 weaklyHypermeth 1.8573e-01 5.3080e-02 weaklyHypermeth 2.2682e-01 5.5545e-03 inconclusive 1.0000e+00 1.0000e+00 insignificant 0.0277092 5.1262e-01 insignificant 1.0000e+00 insignificant 0.685909 0.590347 0.11184468 5 0.678572 0.625926 0.0526463 1.4713e-03 0.4493278 weaklyHypermeth 8.6545e-02 1.00000 weaklyHypermeth 1.8010e-02 0.512575 weaklyHypermeth 7.2041e-01 1 insignificant 0.0295327 4.8542e-01 lowCoverage 1.00000000 lowCoverage 0.6110381 0.590347 0.0364818 5 0.703043 0.625926 0.077118 2.2918e-04 7.2285e-01 weaklyHypermeth 5.5011e-02 1.0000e+00 weaklyHypermeth 3.8932e-02 8.3777e-01 weaklyHypermeth 1.00000000 1.0000e+00 insignificant 0.00182355 9.6066e-01 lowCoverage 1.0000000 lowCoverage chr1 54738017 54739017 1300 ENSG00000212079 0.256942 398 7 0.333153 295 8 0.462941 160 5 0.2673251 309 6 0.402653 149 4 0.447351 340 7 0.238242 301 7 0.415141 207 7 0.306377 225 7 0.216451 194 7 0.335950 223 7 0.404839 89 5 0.274579 129 5 0.400506 158 6 0.460684 208 7 0.380952 61 5 1.0000000 2 0 0.286332 602 4 0.541873 235 6 0.352384 263 6 0.234568 88 4 0.3820513 35 1 0.254155 225 7 0.212338 107 7 0.15298 283 4 0.362116 349 7 0.307095 167 7 0.311616 75 4 0.3260344 280 7 0.369402 304 7 0.274176 361 7 0.304728 245 5 0.225792 197 7 0.2433258 277 5 0.2732919 71 5 0.428571 97 5 0.145242 219 8 0.2252144 314 7 0.388542 341 7 0.305848 254 7 0.372483 415 5 0.235429 458 4 0.336864 274 5 0.188460 0.182130 0.202910 0.1321991 0.185706 0.221220 0.110699 0.159307 0.151370 0.210737 0.188397 0.310730 0.070599 0.219212 0.186811 0.308540 NA 0.1521878 0.084337 0.214235 0.058310 0.171198 0.174975 0.058125 0.138081 0.177431 0.070918 0.3209867 0.169428 0.117543 0.100009 0.208259 0.02349506 0.0165514 0.0273735 0.0909091 0.076933 0.0156685 0.2722563 0.159862 0.107786 0.128091 0.147539 3 0.210607 0.181963 0.0167054 7 0.37511 0.25038 0.1247348 0.178955 9.3269e-01 insignificant 1 1.000000 insignificant 0.304036 0.9941111 insignificant 1 1.00000 insignificant 0.09829539 0.028141 weaklyHypermeth 1 insignificant 0.210410 0.091219 0.13001351 7 0.373766 0.126328 0.2474377 6.5256e-09 9.9997e-01 weaklyHypermeth 1.9775e-07 1.0000e+00 weaklyHypermeth 8.0793e-05 1.0000e+00 weaklyHypermeth 3.5128e-03 1.0000e+00 weaklyHypermeth 0.1323274 2.5998e-02 weaklyHypermeth 5.4162e-01 insignificant 0.210201 0.218966 -0.0288692 5 0.350814 0.323986 0.02682810 5.0824e-01 0.02200326 weaklyHypometh 1.0000e+00 1.00000 insignificant 2.8304e-01 0.3426419 insignificant 1.0000e+00 1.00000 insignificant 0.0614006 2.0061e-01 insignificant 1.0000e+00 insignificant 0.181782 0.0919932 0.1059144 7 0.245887 0.164790 0.0810975 6.0578e-05 9.9965e-01 weaklyHypermeth 1.3169e-03 1.0000e+00 weaklyHypermeth 9.2705e-03 1.0000e+00 weaklyHypermeth 1.8919e-01 1.0000e+00 insignificant 0.0340320 4.5469e-01 insignificant 1.0000e+00 insignificant 0.182946 0.219414 -0.03119513 5 0.321934 0.380321 -0.0583873 7.1152e-01 0.2493665 insignificant 1.0000e+00 1.00000 insignificant 7.4758e-01 0.500339 insignificant 1.0000e+00 1 insignificant -0.0368948 3.0264e-01 insignificant 1.00000000 insignificant 0.0926244 0.219540 -0.1517121 5 0.194752 0.414895 -0.220144 9.8796e-01 1.4160e-05 weaklyHypometh 1.0000e+00 5.9001e-04 weaklyHypometh 9.9976e-01 1.5667e-02 weaklyHypometh 1.00000000 4.3521e-01 insignificant -0.07092680 1.6799e-01 insignificant 1.0000000 insignificant chr1 58868617 58869617 1414 TACSTD2 ENSG00000184292 0.946899 317 5 0.767040 151 5 0.885517 113 5 0.9280304 209 4 0.903203 73 5 0.924390 236 5 0.818932 99 5 0.855200 122 5 0.910873 115 5 0.944760 124 5 0.876434 164 5 0.856288 57 4 0.929687 142 5 0.862308 51 2 0.958640 135 5 0.980000 49 4 0.7878788 26 2 0.918013 399 4 0.883816 230 5 0.957427 274 5 0.915673 67 5 0.9846154 38 4 0.932701 208 5 0.927778 93 5 0.97619 44 2 0.908882 152 5 0.871070 131 5 0.877778 62 5 0.9167095 151 4 0.955958 127 5 0.944347 157 5 0.890711 257 5 0.932231 144 5 0.9261151 221 5 1.0000000 158 3 1.000000 57 2 0.928396 139 5 0.9568051 210 5 0.944402 273 5 0.970150 198 5 0.955109 281 5 0.981443 430 5 0.970011 168 5 0.936499 0.861512 0.848626 0.9206752 0.893110 0.926322 0.809567 0.891212 0.903544 0.935135 0.885941 0.868396 0.924997 0.870548 0.959044 0.982988 0.8403368 0.8993730 0.898778 0.943766 0.900815 0.977657 0.912511 0.910811 0.961486 0.914067 0.863697 0.9124020 0.889042 0.946590 0.924971 0.899532 0.92875804 0.9118105 0.9615649 1.0000000 0.891102 0.9418092 0.9390675 0.964388 0.915996 0.971767 0.955326 4 0.907233 0.907868 -0.0024823 5 0.90241 0.91471 -0.0123015 0.481694 1.4716e-01 insignificant 1 1.000000 insignificant 0.743582 0.0605417 insignificant 1 1.00000 insignificant -0.03043415 0.075598 lowCoverage 1 lowCoverage 0.906999 0.935275 -0.02790116 5 0.863119 0.953109 -0.0899892 9.6067e-01 8.3350e-03 weaklyHypometh 1.0000e+00 6.7354e-01 insignificant 9.8526e-01 1.1542e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0624911 5.7106e-03 lowCoverage 1.4643e-01 lowCoverage 0.907233 0.936944 -0.0344850 5 0.902410 0.959322 -0.05691161 9.9922e-01 0.00228347 weaklyHypometh 1.0000e+00 0.57087 insignificant 9.9513e-01 0.0023451 weaklyHypometh 1.0000e+00 0.58627 insignificant -0.0694561 7.2730e-05 lowCoverage 1.2122e-02 lowCoverage 0.907868 0.9352052 -0.0260411 5 0.914712 0.943730 -0.0290189 9.3064e-01 4.6862e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.6011e-01 1.5099e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0320569 9.7991e-02 lowCoverage 1.0000e+00 lowCoverage 0.907868 0.936944 -0.03926236 5 0.914712 0.959322 -0.0446101 9.9963e-01 0.0061078 weaklyHypometh 1.0000e+00 1.00000 insignificant 9.9825e-01 0.057563 insignificant 1.0000e+00 1 insignificant -0.0390220 6.1967e-03 lowCoverage 0.51638760 lowCoverage 0.9353448 0.937037 -0.0115569 5 0.959807 0.970944 -0.011137 9.1807e-01 5.2435e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.8483e-01 8.0394e-01 insignificant 1.00000000 1.0000e+00 insignificant -0.00696506 6.6982e-01 lowCoverage 1.0000000 lowCoverage chr1 61220317 61221317 1481 NFIA ENSG00000162599 0.694444 48 5 0.675794 33 4 0.848485 17 1 0.7127859 68 5 0.742063 44 5 0.945833 36 4 0.683333 32 2 0.937778 27 4 0.833333 34 5 0.623636 23 2 0.807692 51 4 0.875000 12 1 0.866667 25 1 0.835498 41 5 0.726471 36 2 0.888889 13 1 1.0000000 2 0 0.696392 73 5 0.766667 14 1 0.916667 49 3 0.881944 19 1 1.0000000 11 1 0.744444 73 5 0.833333 14 0 0.79167 15 1 0.900000 20 3 0.666667 10 1 0.464286 16 2 0.7958333 35 5 0.888889 27 3 0.752778 33 4 0.000000 1 0 0.637897 41 5 0.6928571 20 1 0.6134188 92 4 1.000000 5 1 0.572222 22 2 1.0000000 12 0 0.722222 28 2 0.837302 55 6 0.870000 30 1 0.633053 76 5 0.813529 78 5 1.000000 0.886364 0.393939 0.8428030 0.974026 0.981818 0.939394 0.898990 0.833333 0.772727 1.000000 0.988561 1.000000 0.752066 0.772727 0.988561 0.8973225 0.9465565 0.848485 1.000000 1.000000 1.000000 1.000000 1.000000 1.000000 1.000000 0.990909 0.9090909 0.886364 1.000000 1.000000 0.081818 0.69696970 0.7175325 0.6724942 0.9905594 0.090909 1.0000000 0.8484848 0.987013 0.916667 0.938948 1.000000 0 0.840708 0.832117 -0.0157716 1 0.76422 0.76594 -0.0017237 0.672810 3.2470e-01 lowCoverage 1 1.000000 lowCoverage 0.950440 0.0914315 lowCoverage 1 1.00000 lowCoverage 0.07721799 0.353825 lowCoverage 1 lowCoverage 0.840708 0.703125 0.11591973 4 0.764215 0.663034 0.1011808 1.2866e-02 9.9716e-01 lowCoverage 2.0422e-01 1.0000e+00 lowCoverage 1.5713e-01 8.7925e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0511389 5.6203e-01 lowCoverage 1.0000e+00 lowCoverage 0.840708 0.820225 0.0193883 5 0.764215 0.704389 0.05982571 4.9700e-01 0.53812505 insignificant 1.0000e+00 1.00000 insignificant 6.8208e-01 0.7563249 insignificant 1.0000e+00 1.00000 insignificant 0.0286501 5.8051e-01 lowCoverage 1.0000e+00 lowCoverage 0.832117 0.7031250 0.1240000 1 0.765939 0.663034 0.1029045 7.3934e-03 9.7095e-01 lowCoverage 1.2531e-01 1.0000e+00 lowCoverage 6.5736e-02 9.8917e-01 lowCoverage 9.9600e-01 1.0000e+00 lowCoverage -0.0260791 8.1734e-01 lowCoverage 1.0000e+00 lowCoverage 0.832117 0.820225 0.04406703 1 0.765939 0.704389 0.0615494 4.0408e-01 0.7567015 lowCoverage 1.0000e+00 1.00000 lowCoverage 9.0076e-02 0.958375 lowCoverage 1.0000e+00 1 lowCoverage -0.0485678 5.8938e-01 lowCoverage 1.00000000 lowCoverage 0.7031250 0.820225 -0.0795318 4 0.663034 0.704389 -0.041355 9.0641e-01 5.4646e-02 lowCoverage 1.0000e+00 7.1903e-01 lowCoverage 8.9304e-01 3.6942e-01 lowCoverage 1.00000000 1.0000e+00 lowCoverage -0.02248879 8.1088e-01 lowCoverage 1.0000000 lowCoverage chr1 61576017 61577017 1525 NFIA ENSG00000162599 0.330472 213 5 0.113405 477 5 0.194356 139 5 0.1928571 144 3 0.133681 180 5 0.394725 280 5 0.186000 206 5 0.204167 158 5 0.160217 173 5 0.065000 124 5 0.331084 161 5 0.185840 57 3 0.101042 75 4 0.316667 37 3 0.097027 79 4 0.236530 146 5 0.2217813 114 3 0.399096 235 2 0.149073 255 5 0.179323 222 5 0.233031 90 5 0.1280112 52 3 0.147453 167 5 0.205952 63 5 0.36111 20 2 0.185317 173 4 0.191594 177 5 0.039610 121 5 0.1123737 190 5 0.051798 310 5 0.138215 242 5 0.322320 247 5 0.000000 314 5 0.0000000 104 5 0.0490196 296 4 0.166667 5 0 0.034390 184 5 0.0054054 181 5 0.087301 213 4 0.051650 128 5 0.027848 176 4 0.019608 118 3 0.025101 205 3 0.271304 0.076355 0.177862 0.1719688 0.099461 0.325418 0.089549 0.147584 0.099246 0.024790 0.300573 0.150590 0.120124 0.351378 0.075301 0.144880 0.1553426 0.1379214 0.128317 0.180988 0.119424 0.124344 0.117203 0.106993 0.240221 0.122199 0.094211 0.0093037 0.101384 0.053666 0.191841 0.268789 0.00000000 0.0000000 0.0187615 0.0061513 0.016729 0.0106745 0.0787832 0.056234 0.054994 0.030977 0.042278 2 0.183309 0.140389 0.0375362 5 0.19305 0.14275 0.0502969 0.049606 9.8510e-01 weaklyHypermeth 1 1.000000 insignificant 0.066138 0.9917303 insignificant 1 1.00000 insignificant 0.03321805 0.357917 lowCoverage 1 lowCoverage 0.183309 0.014760 0.16856695 5 0.193047 0.013674 0.1793735 2.8363e-10 1.0000e+00 weaklyHypermeth 9.4543e-09 1.0000e+00 weaklyHypermeth 7.4489e-09 1.0000e+00 weaklyHypermeth 5.7299e-07 1.0000e+00 weaklyHypermeth 0.1670368 3.0382e-04 lowCoverage 1.1252e-02 lowCoverage 0.183309 0.058333 0.1003548 4 0.193047 0.053972 0.13907504 3.4229e-06 0.99999990 lowCoverage 2.6330e-04 1.00000 lowCoverage 1.1095e-06 0.9999998 lowCoverage 1.8492e-04 1.00000 lowCoverage 0.1673156 1.0535e-06 lowCoverage 3.3966e-04 lowCoverage 0.140389 0.0147601 0.1272236 5 0.142751 0.013674 0.1290766 4.6611e-06 1.0000e+00 weaklyHypermeth 1.2266e-04 1.0000e+00 weaklyHypermeth 7.3970e-06 1.0000e+00 weaklyHypermeth 3.8932e-04 1.0000e+00 weaklyHypermeth 0.1338187 3.4116e-03 lowCoverage 1.0338e-01 lowCoverage 0.140389 0.058333 0.07008375 4 0.142751 0.053972 0.0887782 3.4451e-03 0.9999396 lowCoverage 1.7226e-01 1.00000 lowCoverage 6.3980e-04 0.999994 lowCoverage 5.3666e-02 1 lowCoverage 0.1340976 5.9508e-04 lowCoverage 0.11901611 lowCoverage 0.0147601 0.058333 -0.0502176 4 0.013674 0.053972 -0.040298 9.9990e-01 5.8329e-04 lowCoverage 1.0000e+00 1.4956e-02 lowCoverage 9.9632e-01 4.9515e-02 lowCoverage 1.00000000 9.9904e-01 lowCoverage 0.00027884 9.9259e-01 lowCoverage 1.0000000 lowCoverage chr1 62923717 62924717 1555 ENSG00000218399 0.821622 427 13 0.769210 327 13 0.833333 60 7 0.8352187 191 11 0.803200 82 10 0.790215 423 13 0.729535 148 12 0.801565 212 9 0.755639 145 11 0.780755 161 13 0.824385 448 13 0.721112 130 10 0.815782 314 13 1.000000 11 1 0.843395 175 12 0.850350 69 8 0.8046620 88 8 0.877747 192 10 0.823568 245 13 0.841706 298 13 0.751157 78 8 0.6703373 65 7 0.803441 249 13 0.865568 92 8 0.88796 84 8 0.786395 382 13 0.850227 140 9 0.968750 20 0 0.7107363 248 9 0.807170 408 13 0.788602 411 13 0.726060 544 13 0.738583 262 11 0.7352886 278 13 0.6808501 229 13 0.838636 81 8 0.746199 69 5 0.7327701 533 13 0.838414 307 11 0.850557 539 13 0.854713 235 8 0.795701 344 10 0.859517 296 12 0.826721 0.812254 0.835122 0.8574094 0.781990 0.814213 0.815275 0.854847 0.825055 0.851770 0.866105 0.757703 0.881586 NA 0.857485 0.879965 0.8737129 0.8935373 0.854904 0.851204 0.841233 0.702494 0.845084 0.904531 0.919332 0.833561 0.835505 0.8875541 0.831914 0.849656 0.814382 0.864572 0.74086780 0.7603925 0.7063075 0.8347262 0.790234 0.7878501 0.8628852 0.876690 0.875812 0.843249 0.913765 3 0.830439 0.856512 -0.0029691 13 0.81608 0.77096 0.0451227 0.781804 8.3006e-01 insignificant 1 1.000000 insignificant 0.964552 0.5635511 insignificant 1 1.00000 insignificant 0.01478332 0.595846 insignificant 1 insignificant 0.830353 0.795455 0.06976321 13 0.813425 0.745953 0.0674713 1.2589e-06 9.9998e-01 weaklyHypermeth 3.2280e-05 1.0000e+00 weaklyHypermeth 9.7753e-04 9.9976e-01 weaklyHypermeth 2.7929e-02 1.0000e+00 weaklyHypermeth 0.0707621 1.8105e-02 weaklyHypermeth 4.0233e-01 insignificant 0.830558 0.802440 -0.0301953 11 0.826751 0.845082 -0.01833034 9.2538e-01 0.01898476 weaklyHypometh 1.0000e+00 1.00000 insignificant 9.8777e-01 0.0325790 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.0236305 1.9663e-01 insignificant 1.0000e+00 insignificant 0.856722 0.7954545 0.0681378 13 0.812642 0.745953 0.0666888 1.4940e-06 9.9992e-01 weaklyHypermeth 4.0378e-05 1.0000e+00 weaklyHypermeth 9.8299e-04 9.9982e-01 weaklyHypermeth 2.8085e-02 1.0000e+00 weaklyHypermeth 0.0559788 9.9281e-02 insignificant 1.0000e+00 insignificant 0.856827 0.802440 -0.02756641 11 0.826025 0.845082 -0.0190570 7.9476e-01 0.0043566 weaklyHypometh 1.0000e+00 0.87133 insignificant 9.1544e-01 0.115007 insignificant 1.0000e+00 1 insignificant -0.0384138 1.7048e-01 insignificant 1.00000000 insignificant 0.7954545 0.801980 -0.1051131 11 0.745953 0.833165 -0.087212 9.9423e-01 4.4570e-08 weaklyHypometh 1.0000e+00 2.3458e-06 weaklyHypometh 9.9986e-01 2.4710e-05 weaklyHypometh 1.00000000 2.2464e-03 weaklyHypometh -0.09439259 4.6959e-03 weaklyHypometh 0.1806132 insignificant chr1 64715817 64716817 1583 CACHD1 ENSG00000158966 0.753746 483 14 0.735394 388 14 0.714894 177 14 0.7413085 217 13 0.694141 154 13 0.812150 482 14 0.775855 162 7 0.761868 289 14 0.735115 193 10 0.775459 207 14 0.763316 597 14 0.653869 111 10 0.762795 322 14 0.685516 27 2 0.707846 216 13 0.685119 71 6 0.6138091 99 9 0.777249 290 14 0.773382 310 14 0.763793 434 14 0.847732 113 9 0.8143315 113 12 0.725837 302 14 0.830279 127 9 0.89813 71 7 0.743095 462 14 0.724133 195 12 0.617949 45 4 0.6923400 277 14 0.797013 447 14 0.729315 440 14 0.774432 623 14 0.692837 297 14 0.7289826 340 14 0.6813615 314 14 0.840666 86 6 0.725974 121 10 0.6603577 494 14 0.746557 332 14 0.763124 437 14 0.778298 362 13 0.758203 296 13 0.752848 356 13 0.761500 0.734891 0.756204 0.7514997 0.732915 0.785626 0.776139 0.734118 0.732493 0.784116 0.757501 0.706503 0.774780 0.723292 0.717904 0.718248 0.6344672 0.7690999 0.795329 0.774528 0.801498 0.797300 0.737394 0.800025 0.874111 0.759337 0.751128 0.7535363 0.752461 0.772104 0.764375 0.758419 0.65389010 0.6936567 0.6900816 0.8253681 0.737432 0.7028696 0.7474756 0.779541 0.789638 0.775353 0.795634 6 0.776970 0.804044 -0.0124988 14 0.79838 0.74899 0.0493951 0.994900 4.3890e-01 insignificant 1 1.000000 insignificant 0.998377 0.0932439 insignificant 1 1.00000 insignificant -0.03188423 0.212789 insignificant 1 insignificant 0.776885 0.751211 0.04813503 14 0.771498 0.666458 0.1050394 3.6911e-05 9.8986e-01 weaklyHypermeth 8.3888e-04 1.0000e+00 weaklyHypermeth 5.4205e-02 9.1073e-01 insignificant 9.1873e-01 1.0000e+00 insignificant 0.0126347 6.6892e-01 insignificant 1.0000e+00 insignificant 0.776714 0.762199 -0.0173342 14 0.755176 0.772535 -0.01735881 8.9899e-01 0.06432073 insignificant 1.0000e+00 1.00000 insignificant 9.2968e-01 0.0141683 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.0254746 4.7178e-02 weaklyHypometh 1.0000e+00 insignificant 0.804233 0.7512107 0.0578623 14 0.782183 0.666458 0.1157249 1.4009e-06 9.9977e-01 weaklyHypermeth 3.8915e-05 1.0000e+00 weaklyHypermeth 2.1428e-02 9.9960e-01 weaklyHypermeth 3.6944e-01 1.0000e+00 insignificant 0.0445190 2.1731e-01 insignificant 1.0000e+00 insignificant 0.804172 0.762199 -0.00616445 14 0.766625 0.772535 -0.0059101 4.9517e-01 0.4105743 insignificant 1.0000e+00 1.00000 insignificant 6.9837e-01 0.741431 insignificant 1.0000e+00 1 insignificant 0.0064096 7.8243e-01 insignificant 1.00000000 insignificant 0.7516657 0.762199 -0.0683834 14 0.714062 0.772535 -0.058472 9.1586e-01 1.6817e-04 weaklyHypometh 1.0000e+00 5.2553e-03 weaklyHypometh 9.8107e-01 2.0093e-02 weaklyHypometh 1.00000000 5.3884e-01 insignificant -0.03810938 2.0781e-01 insignificant 1.0000000 insignificant chr1 64743517 64744517 1586 CACHD1 ENSG00000158966 0.026782 441 17 0.140572 405 19 0.056376 615 23 0.0744497 265 9 0.011656 324 18 0.154832 464 20 0.086513 404 16 0.072336 403 20 0.034252 419 18 0.012963 346 17 0.011969 537 17 0.013066 531 17 0.037786 351 13 0.276438 77 5 0.047412 526 18 0.067517 406 17 0.0054368 481 12 0.059773 254 11 0.027005 383 17 0.258779 390 21 0.069709 158 12 0.0043247 248 10 0.027192 389 23 0.089563 264 14 0.11415 307 13 0.070323 638 23 0.052991 344 17 0.055007 158 13 0.0045642 262 17 0.075411 656 23 0.067302 495 17 0.099021 377 13 0.065155 287 14 0.0400933 367 16 0.2091282 134 8 0.087783 175 9 0.150596 234 16 0.1635384 396 18 0.081477 526 20 0.084785 347 13 0.080789 361 21 0.031720 311 10 0.078681 368 13 0.024757 0.023016 0.033244 0.0452696 0.048528 0.074562 0.099710 0.056008 0.026073 0.048395 0.082428 0.053834 0.036285 0.035291 0.015764 0.111797 0.0040646 0.0841069 0.024491 0.063901 0.049072 0.016431 0.053676 0.145428 0.030971 0.021918 0.031134 0.0270679 0.034164 0.031403 0.023719 0.058872 0.06119770 0.0248561 0.3933715 0.0582124 0.111563 0.0249496 0.0082064 0.010365 0.042260 0.038737 0.017801 6 0.043142 0.043377 0.0059744 14 0.11942 0.10414 0.0152863 0.183800 9.9999e-01 insignificant 1 1.000000 insignificant 0.456648 0.9999970 insignificant 1 1.00000 insignificant 0.01299910 0.521687 insignificant 1 insignificant 0.042588 0.087257 -0.03626652 13 0.103380 0.158109 -0.0547296 9.7183e-01 1.0607e-05 weaklyHypometh 1.0000e+00 1.5153e-03 weaklyHypometh 9.9675e-01 2.5608e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0455866 1.8258e-01 insignificant 1.0000e+00 insignificant 0.041211 0.034501 0.0231130 11 0.081348 0.086702 -0.00535389 6.9379e-02 0.36176875 insignificant 1.0000e+00 1.00000 insignificant 2.6590e-01 0.9039459 insignificant 1.0000e+00 1.00000 insignificant 0.0023052 9.0947e-01 insignificant 1.0000e+00 insignificant 0.042991 0.0872567 -0.0418275 16 0.080697 0.158109 -0.0774123 1.0000e+00 3.7168e-05 weaklyHypometh 1.0000e+00 9.2920e-03 weaklyHypometh 1.0000e+00 1.8592e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0585857 8.1424e-02 insignificant 1.0000e+00 insignificant 0.041009 0.034501 0.01046322 12 0.049450 0.086702 -0.0372512 7.1977e-01 0.0036334 inconclusive 1.0000e+00 0.87133 insignificant 8.8886e-01 0.167652 insignificant 1.0000e+00 1 insignificant -0.0106939 4.6375e-01 insignificant 1.00000000 insignificant 0.0835459 0.034501 0.0642417 12 0.117279 0.086702 0.030578 3.0361e-02 8.3842e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 3.1162e-01 9.9360e-01 insignificant 1.00000000 1.0000e+00 insignificant 0.04789182 1.3996e-01 insignificant 1.0000000 insignificant chr1 65187717 65188717 1609 ENSG00000218308 0.814935 159 5 0.655103 165 5 0.754822 95 5 0.7331921 115 8 0.880192 89 6 0.777700 212 5 0.671108 111 5 0.797754 115 5 0.792803 75 3 0.822826 63 3 0.786232 194 5 0.916530 75 3 0.820557 112 8 0.865432 37 5 0.807240 117 7 0.413012 58 3 0.7294872 63 3 0.707708 140 6 0.818182 89 5 0.743532 161 5 0.925595 42 3 0.7254902 42 3 0.719167 71 6 0.692769 64 5 0.83259 76 3 0.880755 188 8 0.857792 89 5 0.777778 39 3 0.7717131 146 5 0.837774 150 5 0.756187 149 8 0.795092 221 5 0.738556 165 6 0.8185137 111 5 0.7978937 146 8 0.706667 15 2 0.658037 71 5 0.7379704 160 8 0.802961 98 5 0.808011 108 5 0.705422 87 5 0.861506 90 6 0.734592 127 7 0.670154 0.707308 0.591272 0.7344633 0.889629 0.648516 0.715273 0.700224 0.781293 0.765748 0.714463 0.784585 0.779095 0.756385 0.783688 0.653800 0.7020771 0.6810274 0.757322 0.703891 0.818968 0.683778 0.687933 0.723331 0.767039 0.742212 0.806330 0.7749845 0.739935 0.737906 0.688817 0.654130 0.66824916 0.6329592 0.7673972 0.7184358 0.629286 0.6839731 0.7204940 0.727282 0.672618 0.786038 0.631648 3 0.732470 0.753725 -0.0178587 5 0.73931 0.74901 -0.0097092 0.723894 4.3576e-02 weaklyHypometh 1 1.000000 insignificant 0.824697 0.1215319 insignificant 1 1.00000 insignificant -0.03230803 0.309667 lowCoverage 1 lowCoverage 0.732678 0.709581 0.02321411 5 0.765895 0.764226 0.0016693 2.5739e-02 6.8211e-01 weaklyHypermeth 3.4319e-01 1.0000e+00 insignificant 9.1190e-02 9.5302e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0224778 5.1491e-01 insignificant 1.0000e+00 insignificant 0.732678 0.770588 -0.0030173 5 0.765895 0.791367 -0.02547176 7.9331e-01 0.38880308 insignificant 1.0000e+00 1.00000 insignificant 4.2539e-01 0.6434055 insignificant 1.0000e+00 1.00000 insignificant -0.0170810 6.4996e-01 insignificant 1.0000e+00 insignificant 0.754124 0.7095808 0.0415352 5 0.776683 0.764226 0.0124573 1.6520e-04 3.2834e-01 weaklyHypermeth 3.4416e-03 1.0000e+00 weaklyHypermeth 5.4559e-03 9.1373e-01 weaklyHypermeth 1.2400e-01 1.0000e+00 insignificant 0.0547858 1.0763e-01 lowCoverage 1.0000e+00 lowCoverage 0.754124 0.770588 0.02696595 5 0.776683 0.791367 -0.0146837 2.0985e-01 0.7680417 insignificant 1.0000e+00 1.00000 insignificant 2.5765e-01 0.891124 insignificant 1.0000e+00 1 insignificant 0.0152271 6.7029e-01 lowCoverage 1.00000000 lowCoverage 0.7095808 0.770588 -0.0325991 5 0.764226 0.791367 -0.027141 7.1814e-01 3.4030e-02 weaklyHypometh 1.0000e+00 4.8615e-01 insignificant 9.0726e-01 6.0375e-02 insignificant 1.00000000 1.0000e+00 insignificant -0.03955873 3.1217e-01 insignificant 1.0000000 insignificant chr1 67797717 67798717 1722 ENSG00000207504 0.809152 107 8 0.840682 53 4 0.789663 66 5 0.6302643 93 8 0.698006 83 7 0.832843 94 5 0.647127 110 8 0.728986 108 8 0.745370 66 7 0.758185 61 7 0.760214 306 8 0.813095 45 6 0.750627 99 7 0.755637 75 7 0.815152 88 7 0.718750 33 3 0.7736928 55 3 0.671726 94 7 0.564198 81 7 0.690476 61 4 0.897569 44 4 0.6785714 21 0 0.583639 67 4 0.669136 49 6 0.72396 50 5 0.734694 80 4 0.804989 49 4 0.690476 25 2 0.8716641 85 5 0.755584 77 5 0.802083 49 4 0.716268 87 5 0.752335 88 8 0.8205808 66 8 0.6119855 156 5 0.500000 8 1 0.782267 76 7 0.7119048 93 4 0.735404 83 5 0.629464 67 5 0.721875 124 8 0.927273 64 4 0.692279 115 8 0.811224 0.783006 0.788004 0.6269521 0.694333 0.811422 0.756423 0.745694 0.788690 0.786187 0.762020 0.847718 0.759085 0.736811 0.797619 0.687500 0.7880032 0.7623961 0.804762 0.716631 0.886574 0.712456 0.656005 0.744709 0.746627 0.784014 0.774565 0.7242063 0.901426 0.749406 0.813492 0.730316 0.75378292 0.8184464 0.6447401 0.6533909 0.686628 0.8214286 0.7212560 0.676587 0.749646 0.957251 0.701428 0 0.735923 0.762811 -0.0124412 4 0.71372 0.68603 0.0276968 0.803203 3.3273e-01 lowCoverage 1 1.000000 lowCoverage 0.856308 0.3444274 lowCoverage 1 1.00000 lowCoverage -0.00436031 0.887254 lowCoverage 1 lowCoverage 0.735923 0.755647 -0.00451724 4 0.713722 0.801833 -0.0881106 6.8836e-01 1.0599e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 4.9755e-01 5.2352e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0431801 4.3377e-01 insignificant 1.0000e+00 insignificant 0.737408 0.766004 0.0188227 7 0.747382 0.728269 0.01911319 2.9914e-01 0.83482218 insignificant 1.0000e+00 1.00000 insignificant 4.9505e-01 0.8098924 insignificant 1.0000e+00 1.00000 insignificant -0.0015667 9.7739e-01 insignificant 1.0000e+00 insignificant 0.762811 0.7556468 0.0023075 4 0.686025 0.801833 -0.1158074 7.6217e-01 8.2123e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 4.8419e-01 8.8892e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0475404 4.1508e-01 lowCoverage 1.0000e+00 lowCoverage 0.765051 0.766004 0.03432826 4 0.771778 0.728269 0.0435099 1.5040e-01 0.9531558 lowCoverage 1.0000e+00 1.00000 lowCoverage 2.5302e-01 0.946106 lowCoverage 1.0000e+00 1 lowCoverage 0.0027936 9.6188e-01 lowCoverage 1.00000000 lowCoverage 0.7551440 0.766004 0.0248525 5 0.777062 0.728269 0.048793 2.8546e-01 8.9720e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.3436e-01 8.2224e-01 insignificant 1.00000000 1.0000e+00 insignificant -0.04474681 5.3849e-01 insignificant 1.0000000 insignificant chr1 69413217 69414217 1794 ENSG00000218491 0.712787 114 6 0.767168 78 5 0.615741 40 5 0.8708113 106 6 0.672344 54 6 0.714425 75 6 0.639035 74 6 0.816667 52 6 0.680556 39 3 0.944444 21 0 0.554679 72 6 0.520833 33 3 0.713325 79 6 0.660256 44 3 0.679861 55 3 0.694444 15 0 NA 0 0 0.795965 179 3 0.791667 21 0 0.762205 56 6 0.670068 24 3 1.0000000 7 0 0.768254 86 3 0.688889 20 3 0.74839 103 5 0.576852 50 6 0.573545 85 6 0.875000 18 0 0.7372844 66 3 0.777083 48 6 0.582492 55 6 0.769030 47 6 0.637719 74 6 0.7857143 65 6 0.4302721 31 3 0.833333 12 0 0.480724 105 5 0.8829365 39 6 0.739608 112 6 0.695139 84 6 0.789509 150 6 0.939130 73 3 0.869100 105 6 0.741311 0.715050 0.729718 0.8031410 0.840252 0.679709 0.659482 0.854497 0.731481 0.873016 0.723397 0.597222 0.791809 0.744200 0.744974 0.767196 NA 0.7763910 0.813492 0.773449 0.842026 0.805460 0.785195 0.719057 0.718447 0.554056 0.602923 0.8095238 0.774275 0.829365 0.626583 0.774651 0.65747703 0.7815571 0.5321240 0.7779667 0.552108 0.9151550 0.7215470 0.799471 0.811174 0.917084 0.822445 0 0.735708 0.707718 0.0321484 5 0.69901 0.61903 0.0799803 0.321956 9.1197e-01 insignificant 1 1.000000 insignificant 0.633708 0.8328651 insignificant 1 1.00000 insignificant -0.01440475 0.743249 lowCoverage 1 lowCoverage 0.736273 0.676923 0.07088081 5 0.715177 0.650610 0.0645668 1.8476e-02 9.9267e-01 weaklyHypermeth 2.6776e-01 1.0000e+00 insignificant 1.7027e-01 9.2464e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0410526 6.3008e-01 lowCoverage 1.0000e+00 lowCoverage 0.736273 0.812261 -0.0701474 6 0.715177 0.807968 -0.09279042 9.9754e-01 0.00660793 weaklyHypometh 1.0000e+00 0.94399 insignificant 9.9606e-01 0.0196728 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.0903281 1.1644e-01 lowCoverage 1.0000e+00 lowCoverage 0.708609 0.6769231 0.0395129 5 0.678540 0.650610 0.0279297 1.5156e-01 8.8272e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.3016e-01 9.4133e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0554574 5.3642e-01 lowCoverage 1.0000e+00 lowCoverage 0.708609 0.812261 -0.10786227 5 0.678540 0.807968 -0.1294275 9.9934e-01 0.0017393 weaklyHypometh 1.0000e+00 0.72942 insignificant 9.7860e-01 0.153145 insignificant 1.0000e+00 1 insignificant -0.0759233 2.1377e-01 lowCoverage 1.00000000 lowCoverage 0.6748466 0.810707 -0.1391806 5 0.557666 0.692544 -0.134878 9.9999e-01 3.8328e-03 weaklyHypometh 1.0000e+00 7.6655e-02 weaklyHypometh 9.9974e-01 1.4502e-01 insignificant 1.00000000 1.0000e+00 insignificant -0.13138068 1.7935e-01 lowCoverage 1.0000000 lowCoverage chr1 72155517 72156517 1836 ENSG00000218747 0.866435 407 12 0.803856 182 9 0.742257 163 12 0.8796452 233 12 0.863426 123 11 0.787730 302 11 0.803724 161 12 0.874038 107 10 0.767729 142 9 0.844115 169 12 0.847565 276 12 0.832079 181 12 0.834934 193 10 NA 0 0 0.868523 177 11 0.822751 89 12 0.7940972 130 8 0.840900 180 12 0.832347 246 12 0.853756 326 12 0.803030 68 4 0.8821038 128 12 0.873162 280 12 0.840404 96 8 0.83108 83 10 0.829970 240 12 0.819587 107 9 0.737963 62 7 0.7974860 125 9 0.858195 237 12 0.835257 265 12 0.841434 366 12 0.839429 148 10 0.7842210 153 9 0.8587814 205 8 0.888695 130 12 0.824173 96 10 0.8487749 191 12 0.874087 425 12 0.859061 440 12 0.895831 332 12 0.890721 383 12 0.903191 435 12 0.848153 0.795754 0.709653 0.8608265 0.870203 0.804241 0.786327 0.871959 0.731814 0.825236 0.850294 0.791898 0.802455 NA 0.834523 0.787130 0.7619257 0.8105122 0.818885 0.833703 0.746274 0.841990 0.859707 0.824558 0.776705 0.814474 0.814183 0.7833934 0.777447 0.854617 0.861357 0.815527 0.81910699 0.7139514 0.8299561 0.8611219 0.789431 0.8131126 0.8564279 0.827894 0.876329 0.889537 0.884154 7 0.823343 0.833738 -0.0100698 12 0.83569 0.84309 -0.0074054 0.876344 4.6120e-01 insignificant 1 1.000000 insignificant 0.766856 0.3370583 insignificant 1 1.00000 insignificant 0.00032958 0.981424 insignificant 1 insignificant 0.823343 0.807151 0.00842867 12 0.835689 0.838087 -0.0023978 3.1212e-01 2.7266e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.5892e-01 1.1325e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0112101 5.1996e-01 insignificant 1.0000e+00 insignificant 0.823343 0.894293 -0.0518464 12 0.835689 0.883584 -0.04789524 9.9997e-01 0.00080938 weaklyHypometh 1.0000e+00 0.40469 insignificant 9.9788e-01 0.0019515 weaklyHypometh 1.0000e+00 0.58627 insignificant -0.0551097 3.2179e-04 weaklyHypometh 3.5754e-02 weaklyHypometh 0.833738 0.8071506 0.0209500 12 0.843094 0.838087 0.0050076 2.3796e-01 6.7379e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.9358e-01 2.5883e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0115397 5.3624e-01 insignificant 1.0000e+00 insignificant 0.833738 0.894293 -0.03946444 12 0.843094 0.883584 -0.0404898 9.9978e-01 0.0243115 weaklyHypometh 1.0000e+00 1.00000 insignificant 9.9259e-01 0.077501 insignificant 1.0000e+00 1 insignificant -0.0554393 1.0474e-03 weaklyHypometh 0.14963099 insignificant 0.8071506 0.894293 -0.0605856 12 0.838087 0.883584 -0.045497 5.5211e-01 2.8841e-03 weaklyHypometh 1.0000e+00 5.8860e-02 weaklyHypometh 3.1937e-01 7.2908e-02 insignificant 1.00000000 1.0000e+00 insignificant -0.04389953 2.9177e-02 weaklyHypometh 0.6631225 insignificant chr1 79070717 79071717 1923 ENSG00000220148 0.874955 120 7 0.704249 77 5 0.651127 67 7 0.8119328 102 7 0.540816 58 4 0.760489 156 7 0.662155 55 4 0.769689 91 7 0.789377 51 5 0.766573 53 3 0.760148 126 7 0.666667 16 2 0.620181 71 7 0.725000 30 2 0.793193 80 4 0.728571 18 2 0.7049660 145 3 0.836264 103 7 0.722103 97 7 0.688144 139 7 0.685281 39 3 0.7953181 66 7 0.639652 73 4 0.633866 49 3 0.84127 36 4 0.807779 125 7 0.772467 60 4 0.804887 47 2 0.6366667 76 7 0.679229 133 7 0.771645 132 7 0.561693 143 5 0.755704 85 4 0.6904762 33 2 0.6262626 86 4 0.795918 19 2 0.581164 66 4 0.7225440 136 7 0.785094 111 7 0.665858 93 4 0.838792 100 7 0.742246 75 6 0.789109 105 7 0.843704 0.620949 0.671471 0.7493691 0.607919 0.748997 0.696237 0.684829 0.855165 0.801956 0.733416 0.615271 0.639176 0.797958 0.765035 0.736232 0.5556073 0.8026128 0.707812 0.676523 0.731116 0.734107 0.632920 0.620353 0.728663 0.789011 0.744969 0.6932876 0.679275 0.677592 0.731664 0.707006 0.66381170 0.6853865 0.6601522 0.9151139 0.568524 0.7131961 0.7698667 0.770895 0.826657 0.716426 0.750291 2 0.753474 0.715015 0.0304789 4 0.77443 0.71913 0.0553008 0.073217 8.4809e-01 lowCoverage 1 1.000000 lowCoverage 0.599862 0.7469674 lowCoverage 1 1.00000 lowCoverage 0.00968385 0.760820 insignificant 1 insignificant 0.753474 0.689412 0.06471222 4 0.774434 0.694833 0.0796004 1.4753e-02 9.9928e-01 lowCoverage 2.1695e-01 1.0000e+00 lowCoverage 7.5328e-02 9.6248e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0334851 3.9436e-01 lowCoverage 1.0000e+00 lowCoverage 0.753474 0.801653 -0.0307923 7 0.774434 0.793001 -0.01856745 9.1254e-01 0.13097843 insignificant 1.0000e+00 1.00000 insignificant 9.6363e-01 0.1855748 insignificant 1.0000e+00 1.00000 insignificant -0.0353896 3.2949e-01 insignificant 1.0000e+00 insignificant 0.715015 0.6894118 0.0389512 4 0.719133 0.694833 0.0242997 2.8446e-02 9.1609e-01 lowCoverage 3.9509e-01 1.0000e+00 lowCoverage 1.1933e-01 9.2109e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0238013 5.8114e-01 lowCoverage 1.0000e+00 lowCoverage 0.715015 0.801653 -0.06882227 4 0.719133 0.793001 -0.0738682 9.9939e-01 0.0227185 lowCoverage 1.0000e+00 1.00000 lowCoverage 9.6303e-01 0.105767 lowCoverage 1.0000e+00 1 lowCoverage -0.0450735 2.7256e-01 insignificant 1.00000000 insignificant 0.6894118 0.801653 -0.1066642 4 0.694833 0.793001 -0.098168 9.9984e-01 6.5990e-04 lowCoverage 1.0000e+00 1.6095e-02 lowCoverage 9.9623e-01 5.1950e-02 lowCoverage 1.00000000 9.9904e-01 lowCoverage -0.06887474 1.5010e-01 lowCoverage 1.0000000 lowCoverage chr1 84591517 84592517 2007 SAMD13 ENSG00000203943 0.8272927 212 7 0.644362 133 7 0.603604 136 7 0.76477702 166 7 0.742063 66 7 0.700700 360 7 0.796763 102 7 0.667118 118 7 0.688310 112 7 0.800783 84 4 0.6656909 194 7 0.8564187 62 7 0.766893 108 7 0.7291667 18 1 0.679700 121 7 0.6094517 81 4 0.8325865 66 4 0.6456204 165 7 0.7827377 109 7 0.743577 293 7 0.823457 43 4 0.7653236 65 6 0.707617 109 7 0.596988 91 4 0.8231539 74 7 0.7389733 186 7 0.775641 62 5 0.851701 38 3 0.780086 115 7 0.7545783 218 7 0.7094159 195 7 0.7518540 444 7 0.464417 116 7 0.5539887 117 7 0.71256 134 7 0.760374 50 4 0.5646562 90 6 0.6595824 134 7 0.6714752 186 7 0.6476602 200 7 0.697167 171 7 0.782725 152 7 0.683696 188 7 0.8353338 0.718154 0.675891 0.7877469 0.815737 0.778573 0.8324229 0.733338 0.757981 0.7586199 0.742428 0.8581476 0.796280 0.7065209 0.726935 0.6790438 0.811008 0.7381673 0.8078586 0.7971218 0.8191051 0.7782380 0.7724606 0.7273718 0.8653901 0.7490315 0.8124782 0.8365008 0.799231 0.8030907 0.7681453 0.7545675 0.5960683 0.5966999 0.745257 0.764857 0.6579333 0.764006 0.7712964 0.7223107 0.746937 0.8032198 0.738131 3 0.7398374 0.7475610 -0.00275871 7 0.761795 0.750449 0.01134638 0.762215 5.0496e-01 insignificant 1 1.0000000 insignificant 0.97537 2.7619e-01 insignificant 1 1.0000000 insignificant -0.02918490 0.2669187 insignificant 1 insignificant 0.7398374 0.6583463 0.0859456 7 0.761795 0.6084077 0.15338765 8.9154e-06 0.999777 weaklyHypermeth 3.5662e-04 1 weaklyHypermeth 7.1705e-03 0.9961154 weaklyHypermeth 2.0487e-01 1 insignificant 0.1081176 6.3444e-02 insignificant 1.0000e+00 insignificant 0.7393400 0.7123746 0.02162618 7 0.714145 0.68697409 0.0271709 0.08325010 9.3251e-01 insignificant 1.00000 1.000000 insignificant 0.160346 8.2786e-01 insignificant 1 1.000000 insignificant 0.0308360 0.30910281 insignificant 1.000000 insignificant 0.7475610 0.6583463 0.09015897 7 0.750449 0.6084077 0.142041 2.7827e-04 0.945452 weaklyHypermeth 1.1131e-02 1 weaklyHypermeth 5.7889e-04 0.994340 weaklyHypermeth 2.8945e-02 1 weaklyHypermeth 0.137303 2.7375e-02 weaklyHypermeth 0.80514709 insignificant 0.7464702 0.7123746 0.0278864 7 0.7148629 0.68697409 0.0278888 0.0139960 3.4663e-01 weaklyHypermeth 1.0000 1.000000 insignificant 0.0251738 0.8387515 weaklyHypermeth 1 1 insignificant 0.0600209 0.0743624 insignificant 1.00000 insignificant 0.6609105 0.7123746 -0.05948728 7 0.6393813 0.68697409 -0.0475928 0.9644329 6.2770e-02 insignificant 1.00000 8.4825e-01 insignificant 0.99003 5.8621e-02 insignificant 1 1.00000000 insignificant -0.0772816 1.7009e-01 insignificant 1.0000000 insignificant chr1 84857617 84858617 2012 CTBS ENSG00000117151 0.8687584 92 6 0.878610 162 6 0.656732 134 5 0.71021103 139 5 0.882394 70 4 0.796992 573 6 0.867249 106 5 0.911923 84 5 0.904089 73 5 0.940233 87 5 0.8583771 179 6 0.9425641 48 3 0.904097 95 5 0.8333333 5 0 0.943846 93 5 0.9625000 53 5 0.8607143 56 4 0.7445547 131 5 0.9044444 92 5 0.781134 343 5 0.585358 104 6 0.7145833 74 4 0.865574 107 6 0.843651 137 5 0.9583333 19 1 0.9319712 143 6 0.662272 142 5 0.842680 65 4 0.859767 59 6 0.9280319 126 6 0.8068806 171 6 0.7952164 242 6 0.880952 124 6 0.8588808 129 5 0.79544 67 5 0.892857 42 5 0.7605552 165 4 0.8856271 167 6 0.7531604 150 5 0.8320035 105 6 0.729161 134 5 0.944444 28 2 0.828651 142 5 0.8809162 0.875217 0.641507 0.6153780 0.789955 0.634405 0.8206248 0.817043 0.898805 0.9345922 0.853517 0.9511600 0.875602 NA 0.926969 0.9419643 0.841837 0.7049446 0.9257143 0.6804949 0.6834131 0.6602660 0.8238876 0.7749717 1.0000000 0.9432243 0.6511389 0.7979886 0.819604 0.9245535 0.7901608 0.7126820 0.8294218 0.8634394 0.913600 0.929422 0.7266638 0.809599 0.7208286 0.7880971 0.649164 1.0000000 0.699675 3 0.7934990 0.8106551 -0.00948722 5 0.860056 0.682819 0.17723683 0.866552 7.2374e-01 insignificant 1 1.0000000 insignificant 0.25242 9.4493e-01 insignificant 1 1.0000000 insignificant 0.04144455 0.2818728 lowCoverage 1 lowCoverage 0.7934990 0.8487032 -0.0472482 5 0.860056 0.7688716 0.09118416 9.7180e-01 0.151240 insignificant 1.0000e+00 1 insignificant 6.2808e-01 0.8595622 insignificant 1.0000e+00 1 insignificant 0.0119185 6.8746e-01 lowCoverage 1.0000e+00 lowCoverage 0.7926267 0.7745975 0.02066386 5 0.813408 0.80668020 0.0067274 0.58185602 1.3548e-01 insignificant 1.00000 1.000000 insignificant 0.510752 5.0088e-01 insignificant 1 1.000000 insignificant 0.0401536 0.37476519 lowCoverage 1.000000 lowCoverage 0.8106551 0.8487032 -0.03752992 6 0.682819 0.7688716 -0.086053 8.8130e-01 0.393325 insignificant 1.0000e+00 1 insignificant 8.9483e-01 0.530160 insignificant 1.0000e+00 1 insignificant -0.029526 4.6543e-01 insignificant 1.00000000 insignificant 0.8116883 0.7745975 0.0297074 6 0.8270919 0.80668020 0.0204117 0.5003956 2.8859e-01 insignificant 1.0000 1.000000 insignificant 0.6181009 0.4901606 insignificant 1 1 insignificant -0.0012910 0.9798145 lowCoverage 1.00000 lowCoverage 0.8497110 0.7745975 0.07354215 6 0.8584954 0.80668020 0.0518152 0.1206207 6.4107e-01 insignificant 1.00000 1.0000e+00 insignificant 0.49847 3.9014e-01 insignificant 1 1.00000000 insignificant 0.0282351 5.4089e-01 lowCoverage 1.0000000 lowCoverage chr1 85579717 85580717 2039 BCL10 ENSG00000142867 0.7899280 333 9 0.706012 187 9 0.649217 181 9 0.81663446 240 11 0.787601 130 8 0.724157 433 11 0.714024 167 9 0.706274 206 11 0.708320 164 11 0.782469 181 9 0.7874155 408 11 0.7166667 100 8 0.761700 211 11 0.6326118 62 5 0.841041 173 11 0.7420635 84 7 0.8187879 91 6 0.6898804 246 9 0.7484437 216 8 0.764799 397 11 0.837737 98 8 0.7501416 138 9 0.776207 206 9 0.718795 105 9 0.7842807 122 9 0.7406052 196 11 0.646511 224 10 0.752365 86 7 0.658245 192 9 0.7104522 218 11 0.7083514 200 11 0.7549986 436 11 0.616509 189 11 0.6088628 185 11 0.69466 222 11 0.689740 79 7 0.5479550 144 8 0.7180332 241 11 0.7972639 317 9 0.7894424 315 11 0.746563 244 9 0.847222 252 9 0.808378 285 9 0.8211835 0.767080 0.722712 0.8184758 0.805180 0.809612 0.7911375 0.714269 0.738924 0.8194639 0.754015 0.7906011 0.774677 0.7554697 0.831507 0.7588046 0.802174 0.7688304 0.7967292 0.8340780 0.8304872 0.7330993 0.7555880 0.7572894 0.7603331 0.7996423 0.6815335 0.7728056 0.760205 0.7562236 0.7611511 0.8125139 0.7172996 0.7214596 0.767927 0.734446 0.7193377 0.753767 0.8017852 0.8322018 0.723714 0.7878377 0.817568 8 0.7681710 0.7348041 0.02364330 10 0.738725 0.717444 0.02128034 0.041774 9.0710e-01 weaklyHypermeth 1 1.0000000 insignificant 0.17828 7.4596e-01 insignificant 1 1.0000000 insignificant 0.00784488 0.6943872 insignificant 1 insignificant 0.7681710 0.7226415 0.0504875 10 0.738725 0.6727971 0.06592746 1.8409e-04 0.994889 weaklyHypermeth 5.7527e-03 1 weaklyHypermeth 9.9881e-04 0.9965017 weaklyHypermeth 4.4125e-02 1 weaklyHypermeth 0.0984416 1.1537e-02 weaklyHypermeth 5.3620e-01 insignificant 0.7681710 0.7799009 -0.01505430 9 0.738725 0.81086321 -0.0721386 0.50409390 1.3228e-02 weaklyHypometh 1.00000 1.000000 insignificant 0.821207 2.8203e-02 weaklyHypometh 1 1.000000 insignificant -0.0533715 0.02716436 weaklyHypometh 1.000000 insignificant 0.7348041 0.7226415 0.02700604 10 0.717444 0.6727971 0.044647 1.2752e-02 0.888824 weaklyHypermeth 2.1253e-01 1 insignificant 6.1608e-03 0.986491 weaklyHypermeth 1.8573e-01 1 insignificant 0.090597 1.7511e-02 weaklyHypermeth 0.58945977 insignificant 0.7348041 0.7799009 -0.0419091 9 0.7174442 0.81086321 -0.0934190 0.9333417 2.2499e-03 weaklyHypometh 1.0000 0.457331 insignificant 0.9804514 0.0615593 insignificant 1 1 insignificant -0.0612163 0.0188476 weaklyHypometh 1.00000 insignificant 0.7226415 0.7799009 -0.06353114 9 0.6727971 0.81086321 -0.1380661 0.8884737 4.6828e-06 weaklyHypometh 1.00000 2.9268e-04 weaklyHypometh 0.97902 3.6487e-04 weaklyHypometh 1 0.02661355 weaklyHypometh -0.1518131 1.2432e-03 weaklyHypometh 0.0956288 weaklyHypometh chr1 89778917 89779917 2129 LRRC8B ENSG00000197147 0.8632715 548 15 0.786914 151 8 0.741357 123 8 0.90929756 354 16 0.936210 84 8 0.815678 409 15 0.908808 94 8 0.791422 146 7 0.946970 45 3 0.765067 97 8 0.8733936 308 15 0.8756944 43 4 0.945646 113 9 NA 0 0 0.928571 70 5 0.8854167 49 3 0.8444940 68 7 0.9017589 416 15 0.8262037 167 13 0.860330 372 15 0.714286 67 6 0.9132574 155 8 0.878175 254 14 0.847009 59 7 0.8630952 83 8 0.9041913 247 14 0.788139 93 8 0.858333 47 5 0.850296 103 8 0.8286919 267 15 0.8236521 180 12 0.8900161 497 14 0.762907 109 8 0.7442761 126 10 0.83674 231 15 0.816429 71 8 0.8722222 70 4 0.8169515 312 15 0.8722756 390 15 0.9064466 455 15 0.900072 381 15 0.866686 363 15 0.876169 371 15 0.8892072 0.835521 0.816965 0.9069847 0.952860 0.848907 0.8847307 0.817030 0.927973 0.9227088 0.854707 0.8465662 0.914239 NA 0.920495 0.8998223 0.847481 0.9043532 0.9589615 0.8442210 0.8653266 0.9113991 0.8621855 0.8684107 0.8669239 0.9095370 0.7924566 0.8617393 0.898793 0.8726800 0.8252858 0.9142009 0.8261213 0.7863742 0.828386 0.789543 0.8651591 0.871136 0.9470020 0.9082673 0.893589 0.8940360 0.910096 3 0.8725731 0.8619512 -0.00046006 13 0.867920 0.862236 0.00568390 0.501074 7.8705e-01 insignificant 1 1.0000000 insignificant 0.61223 9.4513e-01 insignificant 1 1.0000000 insignificant 0.01690511 0.4334813 insignificant 1 insignificant 0.8725383 0.8150163 0.0499258 15 0.859665 0.8176533 0.04201191 2.1518e-04 0.996626 weaklyHypermeth 6.4573e-03 1 weaklyHypermeth 3.8188e-03 0.9858114 weaklyHypermeth 1.3196e-01 1 insignificant 0.0552453 4.1859e-02 weaklyHypermeth 1.0000e+00 insignificant 0.8725383 0.8979592 -0.02074461 14 0.859665 0.88456469 -0.0248995 0.95457556 4.7147e-02 weaklyHypometh 1.00000 1.000000 insignificant 0.357108 2.8931e-01 insignificant 1 1.000000 insignificant -0.0208294 0.21482946 insignificant 1.000000 insignificant 0.8618838 0.8150163 0.04982238 13 0.853626 0.8176533 0.035973 1.4509e-04 0.949915 weaklyHypermeth 6.0455e-03 1 weaklyHypermeth 8.1395e-03 0.892969 weaklyHypermeth 2.2610e-01 1 insignificant 0.038340 1.5113e-01 insignificant 1.00000000 insignificant 0.8618838 0.8979592 -0.0226544 13 0.8536260 0.88456469 -0.0309386 0.9958049 1.1205e-01 insignificant 1.0000 1.000000 insignificant 0.8181663 0.4191275 insignificant 1 1 insignificant -0.0377346 0.0498455 weaklyHypometh 1.00000 insignificant 0.8150163 0.8979592 -0.07259733 14 0.8176533 0.88456469 -0.0669114 0.9673388 6.6263e-06 weaklyHypometh 1.00000 3.8978e-04 weaklyHypometh 0.86524 1.5559e-03 weaklyHypometh 1 0.07779329 weaklyHypometh -0.0760748 9.1576e-03 weaklyHypometh 0.3981564 insignificant chr1 90000817 90001817 2144 ENSG00000220930 0.1007054 733 11 0.100785 372 11 0.093308 224 11 0.10951616 1011 11 0.216667 93 4 0.125178 565 11 0.087268 207 11 0.397047 189 4 0.115270 363 11 0.153930 151 8 0.1393195 394 11 0.1022727 119 8 0.227031 193 4 0.2759233 88 7 0.078787 220 8 0.1826923 68 4 0.1858178 114 4 0.1001784 797 10 0.1294071 296 7 0.114641 550 11 0.162352 95 7 0.0923188 115 4 0.147848 262 11 0.095041 120 8 0.0767906 178 9 0.2033730 446 11 0.066649 126 7 0.056024 109 5 0.095206 275 7 0.1447724 790 11 0.1159734 740 11 0.1667050 795 11 0.023140 361 11 0.0000000 193 7 0.01000 60 3 0.028571 45 6 0.0341346 477 11 0.0024570 650 11 0.0807079 768 10 0.0859463 424 10 0.077568 1281 10 0.085402 1036 7 0.077316 689 11 0.3704830 0.298087 0.383399 0.3863662 0.353016 0.391712 0.3449433 0.337097 0.361423 0.3602573 0.444713 0.3259147 0.309862 0.4719967 0.307138 0.2879449 0.279073 0.3088697 0.3772210 0.3789404 0.4616981 0.2819821 0.4181783 0.4247454 0.2869357 0.4356846 0.2558377 0.2480968 0.383048 0.4471875 0.4391483 0.4739359 0.1000760 0.0000000 0.019502 0.078008 0.1267635 0.010542 0.2877968 0.3124204 0.241878 0.3067671 0.255039 3 0.1456944 0.1578557 -0.02724524 11 0.127373 0.185797 -0.05842415 0.999952 2.3724e-02 weaklyHypometh 1 1.0000000 insignificant 0.91905 8.8917e-01 insignificant 1 1.0000000 insignificant 0.03319938 0.1409956 insignificant 1 insignificant 0.1455893 0.0179171 0.0970432 11 0.096321 0.0153056 0.08101490 1.9558e-14 1.000000 weaklyHypermeth 2.4447e-12 1 weaklyHypermeth 9.6648e-07 1.0000000 weaklyHypermeth 1.2855e-04 1 weaklyHypermeth 0.1354033 2.1738e-07 weaklyHypermeth 3.1054e-05 weaklyHypermeth 0.1456109 0.0531205 0.03337992 10 0.105077 0.08785647 0.0172205 0.03450123 3.6989e-01 weaklyHypermeth 1.00000 1.000000 insignificant 0.098594 6.5764e-01 insignificant 1 1.000000 insignificant 0.0703992 0.00074621 weaklyHypermeth 0.149243 insignificant 0.1576476 0.0179171 0.11887961 11 0.117947 0.0153056 0.102641 7.4718e-11 1.000000 weaklyHypermeth 8.3020e-09 1 weaklyHypermeth 1.0104e-05 1.000000 weaklyHypermeth 1.0104e-03 1 weaklyHypermeth 0.102204 4.6519e-06 weaklyHypermeth 0.00058149 weaklyHypermeth 0.1577256 0.0531205 0.0609245 10 0.1286691 0.08785647 0.0408126 0.0013165 5.6449e-01 weaklyHypermeth 0.2633 1.000000 insignificant 0.0917525 0.2322325 insignificant 1 1 insignificant 0.0371998 0.0172222 weaklyHypermeth 1.00000 insignificant 0.0179272 0.0531205 -0.07025424 10 0.0166970 0.08785647 -0.0711594 0.9999905 3.3282e-09 weaklyHypometh 1.00000 4.7546e-07 weaklyHypometh 1.00000 1.9549e-05 weaklyHypometh 1 0.00279270 weaklyHypometh -0.0650042 4.0604e-05 weaklyHypometh 0.0058005 weaklyHypometh chr1 90185217 90186217 2168 LRRC8D ENSG00000171492 0.7624835 106 7 0.550154 136 7 0.693080 57 8 0.71736111 79 7 0.588006 77 8 0.652724 91 7 0.615530 84 7 0.675685 95 8 0.743159 79 8 0.616667 50 7 0.6581126 181 8 0.6075692 71 4 0.580042 85 8 0.6595960 77 8 0.656902 89 8 0.6343750 47 2 0.6881126 132 2 0.6926352 114 9 0.6354167 73 5 0.691964 45 4 0.780000 22 1 0.9000000 11 0 0.788025 62 5 0.722222 31 2 0.6875000 42 2 0.7006847 68 5 0.783654 40 2 0.885417 25 2 0.846764 61 4 0.7105655 70 7 0.6096273 98 7 0.6226190 55 7 0.603834 124 8 0.5282113 66 7 0.54885 98 8 0.444444 14 0 0.6202339 85 5 0.4834184 77 5 0.6977814 75 6 0.5867882 92 7 0.636920 71 7 0.950000 30 2 0.702381 77 5 0.8246936 0.613219 0.746044 0.7422644 0.611105 0.655712 0.6741537 0.700915 0.728115 0.6894515 0.660819 0.6198696 0.638948 0.7633295 0.680015 0.6714135 0.759792 0.7061927 0.7035865 0.6839964 0.8911392 0.7841523 0.8082119 0.7876231 0.7428797 0.7213493 0.8227848 0.8871308 0.857908 0.7448764 0.7907068 0.6127788 0.6699671 0.5682374 0.588037 0.443038 0.6585229 0.503504 0.7723985 0.6646495 0.686202 0.8244726 0.725136 0 0.6787330 0.6683761 -0.04287556 4 0.640031 0.655718 -0.01568736 0.698437 4.9566e-06 lowCoverage 1 0.0049566 lowCoverage 0.96013 2.0603e-06 lowCoverage 1 0.0020603 lowCoverage -0.09711104 0.0051844 lowCoverage 1 lowCoverage 0.6787330 0.5560345 0.0909276 7 0.640031 0.5517111 0.08831983 3.4645e-07 0.929048 weaklyHypermeth 2.1653e-05 1 weaklyHypermeth 2.5027e-03 0.9624195 weaklyHypermeth 1.0011e-01 1 insignificant 0.1178140 5.8848e-03 weaklyHypermeth 3.2693e-01 insignificant 0.6807780 0.7623188 -0.02730711 5 0.673088 0.62711111 0.0459765 0.30038218 4.1695e-01 insignificant 1.00000 1.000000 insignificant 0.968552 3.3577e-01 insignificant 1 1.000000 insignificant -0.0587953 0.40480254 insignificant 1.000000 insignificant 0.6683761 0.5560345 0.13600292 4 0.655718 0.5517111 0.104007 3.0354e-16 0.999979 lowCoverage 5.0590e-14 1 lowCoverage 5.0029e-06 0.999845 lowCoverage 6.2537e-04 1 lowCoverage 0.214925 8.3101e-05 lowCoverage 0.00831014 lowCoverage 0.6712565 0.7623188 0.0528254 2 0.7368619 0.62711111 0.1097508 0.0176734 9.9746e-01 lowCoverage 1.0000 1.000000 lowCoverage 0.0314266 0.9997283 lowCoverage 1 1 lowCoverage 0.0383158 0.5961410 lowCoverage 1.00000 lowCoverage 0.5570175 0.7623188 -0.09588928 5 0.5620533 0.62711111 -0.0650578 0.9995405 3.7790e-02 weaklyHypometh 1.00000 5.6246e-01 insignificant 0.99998 3.1703e-02 weaklyHypometh 1 0.66046946 insignificant -0.1766093 4.4703e-02 weaklyHypometh 1.0000000 insignificant chr1 90967317 90968317 2178 BARHL2 ENSG00000143032 0.0786436 91 5 0.185219 323 5 0.258727 421 5 0.07575758 36 5 NA 0 0 0.075758 32 2 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 0.2035714 38 5 NA 0 0 0.187013 40 5 NA 0 0 NA 0 0 0.126206 172 5 NA 0 0 NA 0 0 0.1804350 312 5 NA 0 0 NA 0 0 NA 0 0 0.0864678 288 5 0.1243895 296 5 0.2449495 51 5 0.232512 237 5 NA 0 0 0.22222 89 5 0.163265 37 5 NA 0 0 0.1895798 204 7 0.1194805 61 7 0.1051282 82 9 0.090909 55 5 0.200000 5 0 0.084724 99 7 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0.2137014 0.1885612 0.02117250 5 0.098504 0.147697 -0.04919365 0.642524 9.8458e-01 insignificant 1 1.0000000 insignificant 0.99863 8.3065e-01 insignificant 1 1.0000000 insignificant -0.00039106 0.9922848 lowCoverage 1 lowCoverage 0.2137014 0.1992945 -0.0063515 5 0.098504 0.2095293 -0.11102549 7.1988e-01 0.056525 insignificant 1.0000e+00 1 insignificant 9.8210e-01 0.1142240 insignificant 1.0000e+00 1 insignificant -0.0497964 1.5909e-01 lowCoverage 1.0000e+00 lowCoverage 0.2137014 0.1066667 0.05962583 2 0.098504 0.10060606 -0.0021022 0.26373794 9.5526e-01 lowCoverage 1.00000 1.000000 lowCoverage 0.863131 9.8982e-01 lowCoverage 1 1.000000 lowCoverage 0.0320501 0.38258098 lowCoverage 1.000000 lowCoverage 0.1885612 0.1992945 -0.01796477 5 0.147697 0.2095293 -0.061832 9.3429e-01 0.023161 weaklyHypometh 1.0000e+00 1 insignificant 8.7550e-01 0.213831 insignificant 1.0000e+00 1 insignificant -0.049405 1.6930e-01 lowCoverage 1.00000000 lowCoverage 0.1885612 0.1066667 0.0416249 2 0.1476975 0.10060606 0.0470914 0.2102236 9.9484e-01 lowCoverage 1.0000 1.000000 lowCoverage 0.4676685 0.9996977 lowCoverage 1 1 lowCoverage 0.0324412 0.3772360 lowCoverage 1.00000 lowCoverage 0.1992945 0.1066667 0.08867941 2 0.2095293 0.10060606 0.1089233 0.0010081 9.9909e-01 lowCoverage 0.31762 1.0000e+00 lowCoverage 0.11118 9.9727e-01 lowCoverage 1 1.00000000 lowCoverage 0.0818465 1.7048e-02 lowCoverage 0.5499307 lowCoverage chr1 92199517 92200517 2230 BRDT ENSG00000137948 0.7351714 329 11 0.613662 244 11 0.705545 131 7 0.72690464 251 11 0.640496 94 11 0.749187 445 11 0.664496 134 11 0.662815 211 11 0.711364 86 11 0.624944 118 7 0.7426240 271 11 0.5778297 125 7 0.751480 197 11 0.8238095 40 5 0.767424 132 11 0.7564800 64 7 0.7871212 97 7 0.7281238 243 11 0.7597169 301 11 0.702784 423 11 0.682418 78 7 0.8090136 155 11 0.721907 209 11 0.768725 98 5 0.6735045 87 8 0.7158085 348 11 0.843311 165 9 0.686806 89 7 0.716221 121 9 0.7077453 316 11 0.6896403 310 11 0.7317707 479 11 0.701797 215 11 0.6868141 201 11 0.65760 273 11 0.540240 124 7 0.6986819 159 11 0.7014618 322 11 0.7620378 528 11 0.7777480 409 11 0.765981 302 11 0.689935 250 11 0.756055 626 11 0.7347094 0.702850 0.741167 0.7217581 0.706313 0.763230 0.7010889 0.726117 0.665005 0.7330504 0.760507 0.6788257 0.780689 0.7370101 0.834080 0.7617037 0.778878 0.7002788 0.7517064 0.7210019 0.6748650 0.7974569 0.7287037 0.7655492 0.6702418 0.7340457 0.7985698 0.7047929 0.728481 0.7258551 0.7218593 0.7239541 0.6694778 0.6988064 0.676602 0.675784 0.7155549 0.714647 0.7741306 0.7746822 0.756189 0.7543631 0.770328 6 0.7433291 0.7380855 0.00374513 11 0.692131 0.717367 -0.02523615 0.548075 5.7083e-01 insignificant 1 1.0000000 insignificant 0.48824 1.5579e-01 insignificant 1 1.0000000 insignificant -0.01730693 0.4111551 insignificant 1 insignificant 0.7436419 0.7017002 0.0360702 11 0.724749 0.6862634 0.03848592 1.4227e-03 0.983725 weaklyHypermeth 3.3875e-02 1 weaklyHypermeth 4.6224e-03 0.9841459 weaklyHypermeth 1.4239e-01 1 insignificant 0.0471669 1.4579e-01 insignificant 1.0000e+00 insignificant 0.7433291 0.7810875 -0.03527073 11 0.692131 0.77739498 -0.0852637 0.99588061 8.8388e-02 insignificant 1.00000 1.000000 insignificant 0.975929 9.2090e-02 insignificant 1 1.000000 insignificant -0.0387524 0.09002831 insignificant 1.000000 insignificant 0.7381729 0.7017002 0.03263595 11 0.721977 0.6862634 0.035713 2.4771e-03 0.971929 weaklyHypermeth 6.0418e-02 1 weaklyHypermeth 4.2353e-03 0.984395 weaklyHypermeth 1.4604e-01 1 insignificant 0.064474 6.0839e-02 insignificant 1.00000000 insignificant 0.7380855 0.7810875 -0.0395660 11 0.7173674 0.77739498 -0.0600276 0.9979177 1.8347e-02 weaklyHypometh 1.0000 1.000000 insignificant 0.9289234 0.0173399 weaklyHypometh 1 1 insignificant -0.0214455 0.3436839 insignificant 1.00000 insignificant 0.7017002 0.7809839 -0.07312213 11 0.6862634 0.75715817 -0.0708948 0.9999258 6.1358e-05 weaklyHypometh 1.00000 3.0679e-03 weaklyHypometh 0.99999 4.4492e-05 weaklyHypometh 1 0.00556151 weaklyHypometh -0.0859193 2.1324e-02 weaklyHypometh 0.6663628 insignificant chr1 93898617 93899617 2258 BCAR3 ENSG00000137936 0.7424595 121 5 0.605584 121 6 0.808092 97 5 0.77269832 117 6 0.734565 84 4 0.663306 138 6 0.819524 73 6 0.765440 76 6 0.832672 38 3 0.960000 29 4 0.7725468 170 6 0.6938776 24 1 0.816667 42 3 0.7619048 37 5 0.800997 49 4 0.8125000 44 4 0.7916667 93 3 0.8561762 154 6 0.6273810 49 5 0.754864 100 5 0.877778 36 4 0.8000000 8 0 0.710119 110 6 0.806566 54 4 0.7404401 61 4 0.8067126 156 6 0.722222 27 2 0.820000 29 3 0.726895 90 6 0.7740926 170 7 0.7267983 132 7 0.7317465 142 6 0.721825 69 5 0.7974868 65 6 0.56457 155 6 0.625000 7 0 0.5599206 63 6 0.7280561 149 7 0.8531784 176 7 0.8285714 143 6 0.736200 149 6 0.785791 73 5 0.869387 127 6 0.7988863 0.736041 0.835617 0.7906340 0.789519 0.839623 0.7871267 0.814982 0.829847 0.9750456 0.829631 0.7997330 0.855140 0.9205607 0.854421 0.9007009 0.825426 0.8385740 0.8395639 0.8539978 0.9283489 0.8434672 0.8694219 0.8248372 0.7491150 0.7855750 0.7616822 0.8630934 0.872400 0.8294825 0.8001281 0.8655718 0.7319055 0.8190476 0.774883 0.790885 0.7944667 0.767418 0.9093928 0.8727698 0.806974 0.8371276 0.868201 1 0.8134058 0.8137931 -0.00457427 6 0.672586 0.643116 0.02947003 0.617285 1.3591e-01 insignificant 1 1.0000000 insignificant 0.93951 6.6956e-01 insignificant 1 1.0000000 insignificant -0.00063472 0.9785895 lowCoverage 1 lowCoverage 0.8094059 0.7559055 0.0543578 6 0.638984 0.5636025 0.07538178 1.2383e-02 0.999703 weaklyHypermeth 2.1351e-01 1 insignificant 5.0253e-02 0.9998067 insignificant 1.0000e+00 1 insignificant 0.1035025 4.8724e-02 lowCoverage 1.0000e+00 lowCoverage 0.8171324 0.8218563 -0.02702669 6 0.799066 0.82806058 -0.0289950 0.96314138 1.8438e-02 weaklyHypometh 1.00000 1.000000 insignificant 0.908665 2.6019e-01 insignificant 1 1.000000 insignificant -0.0449794 0.16941119 lowCoverage 1.000000 lowCoverage 0.8136095 0.7559055 0.05477788 6 0.603462 0.5636025 0.039860 4.3759e-03 0.997779 weaklyHypermeth 8.9303e-02 1 weaklyHypermeth 7.3847e-02 0.999505 insignificant 1.0000e+00 1 insignificant 0.104137 4.6960e-02 lowCoverage 1.00000000 lowCoverage 0.8153998 0.8218563 -0.0233898 6 0.8038947 0.82806058 -0.0241658 0.8669037 2.0965e-01 insignificant 1.0000 1.000000 insignificant 0.8360163 0.5898941 insignificant 1 1 insignificant -0.0443447 0.1609913 lowCoverage 1.00000 lowCoverage 0.7680000 0.8215892 -0.08228982 6 0.7246317 0.80349781 -0.0788661 0.9972206 5.5764e-04 weaklyHypometh 1.00000 2.1448e-02 weaklyHypometh 0.99323 1.1938e-02 weaklyHypometh 1 0.34107351 insignificant -0.1484818 1.2781e-02 weaklyHypometh 0.4915761 insignificant chr1 95092417 95093417 2313 SLC44A3 ENSG00000143036 0.1388580 226 6 0.065149 93 7 0.072653 171 7 0.03982843 150 6 0.108730 37 5 0.073185 252 6 0.080633 129 7 0.056540 113 6 0.050115 148 6 0.030661 136 6 0.1066638 131 6 0.0514286 165 7 0.015873 110 6 NA 0 0 0.123782 133 6 0.0646617 123 7 0.0163265 131 7 0.0695906 169 6 0.0102041 117 7 0.014052 352 7 0.014615 99 5 0.0057143 147 7 0.033592 170 7 0.065508 107 4 0.0256410 90 6 0.0441628 145 6 0.054861 129 7 0.063265 83 4 0.076697 64 5 0.0324451 228 7 0.0790620 132 6 0.0824714 345 6 0.000000 104 7 0.0256410 85 6 0.00000 118 4 0.000000 85 6 0.0000000 56 4 0.0116186 147 6 0.0651496 255 6 0.0112434 234 7 0.028571 246 7 0.056100 239 6 0.025188 283 6 0.1866993 0.098805 0.112567 0.0523447 0.148796 0.096095 0.1245364 0.073680 0.068339 0.0405997 0.129487 0.0818182 0.021645 NA 0.163824 0.0998160 0.014552 0.0892897 0.0139860 0.0217503 0.0213993 0.0090909 0.0458483 0.0874236 0.0325444 0.0575231 0.0858482 0.0960165 0.117992 0.0499610 0.1056026 0.1095966 0.0000000 0.0349650 0.000000 0.000000 0.0000000 0.014633 0.0948643 0.0094697 0.045455 0.0712555 0.030471 4 0.0582121 0.0586544 0.00654442 7 0.053054 0.047482 0.00557190 0.626887 9.0684e-01 insignificant 1 1.0000000 insignificant 0.57819 9.7164e-01 insignificant 1 1.0000000 insignificant 0.01440591 0.2180883 insignificant 1 insignificant 0.0582121 0.0067227 0.0621145 6 0.053054 0.0052024 0.04785111 1.2966e-04 0.999984 weaklyHypermeth 4.1824e-03 1 weaklyHypermeth 1.5928e-05 0.9999990 weaklyHypermeth 1.3529e-03 1 weaklyHypermeth 0.0563656 6.0613e-06 weaklyHypermeth 6.0613e-04 weaklyHypermeth 0.0582121 0.0270485 0.02001763 7 0.053054 0.03713968 0.0159138 0.11251324 4.0539e-01 insignificant 1.00000 1.000000 insignificant 0.088151 5.5498e-01 insignificant 1 1.000000 insignificant 0.0253250 0.08341819 insignificant 1.000000 insignificant 0.0586544 0.0067227 0.05480154 6 0.047482 0.0052024 0.042279 1.0936e-05 1.000000 weaklyHypermeth 6.0754e-04 1 weaklyHypermeth 6.4301e-05 0.999999 weaklyHypermeth 4.9462e-03 1 weaklyHypermeth 0.041960 1.8827e-04 weaklyHypermeth 0.01711520 weaklyHypermeth 0.0586544 0.0270485 0.0154439 7 0.0474816 0.03713968 0.0103419 0.0486479 4.3933e-01 weaklyHypermeth 1.0000 1.000000 insignificant 0.1447870 0.6247942 insignificant 1 1 insignificant 0.0109190 0.4081276 insignificant 1.00000 insignificant 0.0067227 0.0270485 -0.03821710 6 0.0052024 0.03713968 -0.0319373 0.9999998 7.7741e-03 weaklyHypometh 1.00000 1.6949e-01 insignificant 1.00000 1.9325e-02 weaklyHypometh 1 0.47134946 insignificant -0.0310406 3.3198e-02 weaklyHypometh 0.8972317 insignificant chr1 96608917 96609917 2340 ENSG00000200800 0.7791466 354 10 0.663477 143 10 0.701619 149 10 0.83896010 278 10 0.820097 83 10 0.761154 278 10 0.762651 128 9 0.841802 155 9 0.681469 116 10 0.886389 92 10 0.8084764 273 10 0.6579167 92 6 0.783748 145 10 1.0000000 32 1 0.796092 128 8 0.7026092 103 6 0.8536053 64 6 0.8264763 263 10 0.8464272 173 10 0.874099 263 9 0.894742 78 8 0.8073523 146 10 0.662247 220 10 0.779762 76 9 0.9072348 101 10 0.6831259 189 10 0.662259 81 5 0.841667 58 5 0.686780 105 8 0.8265771 201 10 0.7908918 189 10 0.7385260 467 10 0.523835 109 7 0.7587912 125 8 0.71481 181 10 0.936111 63 5 0.6877778 111 10 0.8027157 190 9 0.8007822 252 10 0.8419113 327 10 0.843326 284 10 0.877079 231 8 0.815168 348 10 0.7985350 0.680192 0.735786 0.8471282 0.844596 0.815250 0.7801930 0.852746 0.790628 0.8994157 0.833005 0.7138075 0.807889 0.9076550 0.820823 0.7224944 0.842802 0.8550239 0.8511124 0.8753566 0.8997263 0.8160085 0.7686231 0.7966338 0.9104493 0.7847582 0.7717137 0.8395402 0.788120 0.8301231 0.7961406 0.8264623 0.6187114 0.7481432 0.820523 0.922318 0.7380268 0.816490 0.8478917 0.8548524 0.864496 0.8854720 0.854602 4 0.8146135 0.8105704 0.00216584 10 0.795164 0.729622 0.06554176 0.265236 5.6315e-01 insignificant 1 1.0000000 insignificant 0.60000 6.3733e-01 insignificant 1 1.0000000 insignificant 0.02088038 0.5139770 insignificant 1 insignificant 0.8145015 0.7650834 0.0415976 10 0.776542 0.6873219 0.08922044 1.2122e-02 0.992018 weaklyHypermeth 2.1351e-01 1 insignificant 2.0546e-01 0.9762754 insignificant 1.0000e+00 1 insignificant 0.0569709 3.6860e-01 insignificant 1.0000e+00 insignificant 0.8145015 0.8682386 -0.03999693 10 0.776542 0.84297895 -0.0664366 0.99722885 6.6971e-03 weaklyHypometh 1.00000 0.744123 insignificant 0.998778 1.9638e-02 weaklyHypometh 1 1.000000 insignificant -0.0413427 0.08886446 insignificant 1.000000 insignificant 0.8107966 0.7650834 0.04123639 10 0.735345 0.6873219 0.048023 3.5354e-02 0.981790 weaklyHypermeth 4.8430e-01 1 insignificant 2.6626e-01 0.967397 insignificant 1.0000e+00 1 insignificant 0.036090 5.7253e-01 insignificant 1.00000000 insignificant 0.8107966 0.8682386 -0.0417256 10 0.7353453 0.84297895 -0.1076336 0.9978362 1.0382e-02 weaklyHypometh 1.0000 0.943780 insignificant 0.9976470 0.0861439 insignificant 1 1 insignificant -0.0622230 0.0444551 weaklyHypometh 1.00000 insignificant 0.7650834 0.8682386 -0.08067917 10 0.6873219 0.84297895 -0.1556570 0.9997478 1.1174e-02 weaklyHypometh 1.00000 2.1910e-01 insignificant 0.99920 2.3421e-02 weaklyHypometh 1 0.50914307 insignificant -0.0983135 1.4014e-01 insignificant 1.0000000 insignificant chr1 98553317 98554317 2380 ENSG00000220158 0.7044239 114 5 0.763288 151 5 0.714399 62 6 0.71862745 136 5 0.836015 41 4 0.693053 210 6 0.728175 32 3 0.699055 114 6 0.616799 48 6 0.542203 58 6 0.7771977 211 6 0.4940476 19 2 0.746769 66 6 0.5678571 39 5 0.530068 61 6 0.5520833 22 0 1.0000000 15 0 0.5827470 118 5 0.6889568 95 6 0.689789 149 6 0.653846 36 2 0.4259740 30 2 0.769394 82 5 0.686065 56 5 0.4732143 17 2 0.6659962 140 5 0.768452 42 3 0.640000 18 3 0.714083 113 6 0.7024172 165 5 0.6215071 98 5 0.7347304 163 6 0.636095 107 6 0.6358225 81 6 0.62132 127 5 0.800000 10 0 0.5363074 65 5 0.6259357 118 5 0.7176515 68 5 0.7660985 114 5 0.680859 103 5 0.840278 38 5 0.691429 147 5 0.6792867 0.724667 0.602505 0.6323982 0.791476 0.625767 0.6443223 0.634422 0.585073 0.5630031 0.610744 0.4230769 0.653297 0.4832418 0.587427 0.4884615 1.000000 0.5591699 0.6861828 0.5875597 0.5537924 0.4783217 0.7122797 0.6024908 0.4454948 0.6532837 0.5910962 0.6627569 0.737726 0.5571822 0.6987343 0.6810729 0.5213585 0.4836164 0.540607 0.600000 0.5822178 0.563285 0.7563986 0.7678904 0.765692 0.8089744 0.666374 1 0.6729131 0.6864583 -0.02191417 5 0.615721 0.675061 -0.05934049 0.927666 1.2443e-01 insignificant 1 1.0000000 insignificant 0.56401 3.7925e-01 insignificant 1 1.0000000 insignificant 0.02763768 0.5050548 lowCoverage 1 lowCoverage 0.6729131 0.6476378 0.0300036 5 0.615721 0.5943703 0.02135038 2.7760e-02 0.711549 weaklyHypermeth 4.4064e-01 1 insignificant 1.7690e-01 0.9260263 insignificant 1.0000e+00 1 insignificant 0.0396983 3.8664e-01 lowCoverage 1.0000e+00 lowCoverage 0.6744584 0.7170213 -0.05393199 5 0.662864 0.65766640 0.0051981 0.94607435 4.6110e-03 weaklyHypometh 1.00000 0.576376 insignificant 0.954649 1.1622e-02 weaklyHypometh 1 1.000000 insignificant -0.0569854 0.17653652 lowCoverage 1.000000 lowCoverage 0.6864583 0.6476378 0.05827357 5 0.675061 0.5943703 0.080691 2.8874e-03 0.930672 weaklyHypermeth 6.5623e-02 1 weaklyHypermeth 7.4498e-02 0.847560 insignificant 1.0000e+00 1 insignificant 0.012061 8.0060e-01 lowCoverage 1.00000000 lowCoverage 0.6845426 0.7170213 -0.0405830 5 0.6445144 0.65766640 -0.0131520 0.7850021 4.1743e-02 weaklyHypometh 1.0000 1.000000 insignificant 0.9850160 0.0138626 weaklyHypometh 1 1 insignificant -0.0846231 0.0692756 lowCoverage 1.00000 lowCoverage 0.6482213 0.7170213 -0.08207088 5 0.6078518 0.65766640 -0.0498146 0.7033448 2.1480e-04 weaklyHypometh 1.00000 9.7636e-03 weaklyHypometh 0.92664 1.3675e-02 weaklyHypometh 1 0.36960770 insignificant -0.0966838 6.3412e-02 lowCoverage 1.0000000 lowCoverage chr1 109481031 109482031 2544 KIAA1324 ENSG00000116299 0.7589466 125 6 0.748521 112 6 0.712963 48 6 0.70238095 132 6 0.492208 46 4 0.733796 178 6 0.581633 49 6 0.709085 70 6 0.595238 56 6 0.764220 46 6 0.8097569 157 6 0.3055556 10 0 0.721212 87 6 0.8452381 37 2 0.492692 70 6 0.4916667 17 1 0.0000000 2 0 0.8303571 153 6 0.6761089 84 6 0.825745 117 6 0.562500 19 2 0.7469697 64 6 0.755556 39 6 0.723810 51 6 0.7984127 32 4 0.5947972 115 6 0.689286 36 5 0.595238 19 2 0.713447 91 6 0.6368291 93 6 0.6785494 101 6 0.7675000 262 6 0.600552 92 6 0.6179045 88 6 0.63781 86 6 0.888889 14 0 0.5220779 65 6 0.6892857 98 6 0.7809106 93 6 0.7809524 123 6 0.770153 107 6 0.798246 63 6 0.770513 103 6 0.7485776 0.685534 0.717172 0.7075603 0.563636 0.708747 0.6876933 0.707830 0.609462 0.7645073 0.767109 0.3528139 0.719126 0.7878788 0.738408 0.4857143 0.396080 0.8063544 0.6820695 0.7878659 0.5714286 0.7298701 0.7414141 0.7487941 0.7795918 0.7257782 0.6243506 0.6196660 0.785163 0.7379020 0.6772547 0.6814719 0.6324205 0.6240835 0.630179 0.904762 0.6023613 0.684508 0.7828174 0.7810761 0.777014 0.8120301 0.759341 0 0.7243108 0.7234273 0.00567968 6 0.591023 0.681931 -0.09090841 0.667392 5.1757e-01 insignificant 1 1.0000000 insignificant 0.93183 3.6305e-01 insignificant 1 1.0000000 insignificant -0.04870831 0.3488681 lowCoverage 1 lowCoverage 0.7243108 0.6410835 0.0815629 6 0.591023 0.5392864 0.05173643 1.7254e-03 0.998883 weaklyHypermeth 3.9214e-02 1 weaklyHypermeth 4.2639e-01 0.9896421 insignificant 1.0000e+00 1 insignificant -0.0195531 7.8019e-01 lowCoverage 1.0000e+00 lowCoverage 0.7258979 0.7893661 -0.06673905 6 0.730979 0.78607599 -0.0550973 0.97379073 1.0400e-02 weaklyHypometh 1.00000 0.945496 insignificant 0.996555 4.9710e-03 weaklyHypometh 1 0.621378 insignificant -0.1402886 0.00679910 lowCoverage 0.679910 lowCoverage 0.7234273 0.6410835 0.08013856 6 0.681931 0.5392864 0.142645 1.9666e-03 0.998495 weaklyHypermeth 5.0426e-02 1 weaklyHypermeth 8.1757e-02 0.997013 insignificant 1.0000e+00 1 insignificant 0.029155 6.1621e-01 insignificant 1.00000000 insignificant 0.7259669 0.7893661 -0.0656562 6 0.7228969 0.78607599 -0.0631791 0.9817235 8.5487e-03 weaklyHypometh 1.0000 0.854875 insignificant 0.8755240 0.0462674 weaklyHypometh 1 1 insignificant -0.0915803 0.0015955 weaklyHypometh 0.93667 insignificant 0.6431818 0.7893661 -0.14960834 6 0.6422630 0.78607599 -0.1438130 0.9999978 3.6420e-07 weaklyHypometh 1.00000 2.8016e-05 weaklyHypometh 0.99901 4.8611e-04 weaklyHypometh 1 0.03038201 weaklyHypometh -0.1207356 6.4146e-02 insignificant 1.0000000 insignificant chr1 109618331 109619331 2553 CELSR2 ENSG00000143126 0.4798804 483 9 0.309766 297 8 0.325912 302 9 0.50083313 459 9 0.138091 237 10 0.565874 509 9 0.382450 278 9 0.189675 330 9 0.302458 312 9 0.450924 243 9 0.4100166 383 9 0.3368923 186 9 0.115280 276 9 0.3225330 114 9 0.296688 330 10 0.1899091 135 9 0.1901265 124 3 0.2819291 771 9 0.1311473 439 9 0.498590 404 9 0.417080 153 9 0.3825265 281 9 0.469778 213 9 0.311858 206 9 0.3927963 809 9 0.3252425 377 9 0.225477 355 9 0.382734 120 9 0.213838 394 9 0.2073106 449 9 0.0670444 598 9 0.5132000 450 9 0.486475 287 9 0.3281729 408 9 0.28806 209 9 0.412108 167 9 0.4754748 179 10 0.3432669 544 9 0.5429906 446 9 0.4482724 401 9 0.344549 425 9 0.418466 641 9 0.381052 300 9 0.4876454 0.250046 0.325837 0.5227199 0.180301 0.550927 0.3485802 0.191990 0.315539 0.4780637 0.449336 0.4073160 0.153577 0.3175211 0.334114 0.2182114 0.225068 0.3635069 0.0388645 0.3515624 0.5682023 0.4364745 0.4752129 0.4042267 0.3452933 0.3853979 0.2856200 0.2898540 0.238427 0.2346746 0.0753411 0.5422999 0.4136832 0.3245780 0.157244 0.365743 0.4613209 0.230983 0.6169827 0.4431188 0.285429 0.4001325 0.420706 9 0.3359044 0.2988193 0.02636489 9 0.376085 0.282403 0.09368172 0.238760 9.9262e-01 insignificant 1 1.0000000 insignificant 0.76088 7.7743e-01 insignificant 1 1.0000000 insignificant -0.00479157 0.9205506 insignificant 1 insignificant 0.3359044 0.3205128 0.0180535 9 0.376085 0.4375823 -0.06149757 1.8652e-01 0.091776 insignificant 1.0000e+00 1 insignificant 6.1445e-01 0.0736894 insignificant 1.0000e+00 1 insignificant -0.0679784 1.5282e-01 insignificant 1.0000e+00 insignificant 0.3357565 0.4315409 -0.09693398 9 0.360048 0.40260367 -0.0425555 0.96785626 1.5586e-04 weaklyHypometh 1.00000 0.051954 weaklyHypometh 0.981390 2.0517e-04 weaklyHypometh 1 0.100892 insignificant -0.1061172 0.03825849 weaklyHypometh 1.000000 insignificant 0.2988193 0.3205128 -0.01429779 9 0.282403 0.4375823 -0.155179 7.8692e-01 0.042119 weaklyHypometh 1.0000e+00 1 insignificant 7.7660e-01 0.081733 insignificant 1.0000e+00 1 insignificant -0.063187 2.2353e-01 insignificant 1.00000000 insignificant 0.2990442 0.4315409 -0.1283780 9 0.3077750 0.40260367 -0.0948287 0.9972308 4.0187e-05 weaklyHypometh 1.0000 0.040187 weaklyHypometh 0.9890865 0.0077617 weaklyHypometh 1 1 insignificant -0.1013256 0.0643435 insignificant 1.00000 insignificant 0.3193747 0.4315409 -0.11843760 9 0.3353245 0.40260367 -0.0672791 0.9950514 5.7564e-03 weaklyHypometh 1.00000 1.4144e-01 insignificant 0.99514 4.9258e-02 weaklyHypometh 1 0.87989532 insignificant -0.0381388 4.4347e-01 insignificant 1.0000000 insignificant chr1 110139531 110140531 2580 ENSG00000213353 0.8515232 354 12 0.819490 205 10 0.754876 148 12 0.87443002 286 11 0.845925 129 11 0.737352 602 11 0.734259 158 11 0.828190 178 9 0.745719 162 11 0.827105 160 10 0.8184981 344 11 0.8590829 80 7 0.829158 177 11 0.9692308 56 5 0.829512 187 11 0.7606241 102 9 0.5765993 74 7 0.8770240 301 11 0.8483484 226 11 0.828413 463 11 0.860859 86 8 0.8337050 139 9 0.860838 231 11 0.787121 104 8 0.9586128 108 8 0.8118381 270 11 0.814176 164 8 0.741880 53 6 0.787630 161 10 0.8219786 319 11 0.8664730 254 11 0.8925945 502 11 0.842792 218 10 0.7673328 162 11 0.69965 187 9 0.918571 90 10 0.8176240 165 8 0.7857243 293 11 0.9006918 393 11 0.8919088 395 11 0.874917 360 11 0.895102 340 11 0.913945 369 11 0.8647971 0.792071 0.680892 0.8894855 0.867992 0.826635 0.8271780 0.849271 0.728968 0.8719730 0.859069 0.9142128 0.837314 0.8718783 0.864524 0.8203737 0.619898 0.8909170 0.8284988 0.8405392 0.8808351 0.8249723 0.9061312 0.7990170 0.9278472 0.8308443 0.7931198 0.8282828 0.832393 0.8278063 0.8868317 0.8633718 0.7921232 0.8166246 0.820060 0.901195 0.7971597 0.778819 0.8981148 0.8852266 0.898836 0.9046760 0.903278 6 0.8424408 0.8586366 -0.01231695 11 0.807263 0.841308 -0.03404497 0.987068 2.8901e-01 insignificant 1 1.0000000 insignificant 0.94505 1.2350e-01 insignificant 1 1.0000000 insignificant -0.02570752 0.2934569 insignificant 1 insignificant 0.8424408 0.8152466 0.0281303 11 0.807263 0.7997317 0.00753166 4.5411e-02 0.841217 weaklyHypermeth 6.4873e-01 1 insignificant 3.7185e-01 0.6057015 insignificant 1.0000e+00 1 insignificant 0.0054860 8.7890e-01 insignificant 1.0000e+00 insignificant 0.8424408 0.8878706 -0.05895881 11 0.807263 0.90584813 -0.0985847 0.99999981 1.1151e-04 weaklyHypometh 1.00000 0.051954 weaklyHypometh 0.999998 4.3641e-04 weaklyHypometh 1 0.100892 insignificant -0.0845452 0.00016332 weaklyHypometh 0.040829 weaklyHypometh 0.8586366 0.8152466 0.04084538 11 0.841308 0.7997317 0.041577 1.8513e-03 0.952286 weaklyHypermeth 4.8718e-02 1 weaklyHypermeth 5.0911e-02 0.903949 insignificant 8.3460e-01 1 insignificant 0.031194 3.9015e-01 insignificant 1.00000000 insignificant 0.8586366 0.8878706 -0.0463800 11 0.8413084 0.90584813 -0.0645398 0.9998027 6.2215e-03 weaklyHypometh 1.0000 0.734556 insignificant 0.9995364 0.0107125 weaklyHypometh 1 1 insignificant -0.0588377 0.0048229 weaklyHypometh 0.96458 insignificant 0.8152466 0.8878706 -0.08240499 11 0.7997317 0.90584813 -0.1061164 0.9999971 1.9809e-04 weaklyHypometh 1.00000 9.4330e-03 weaklyHypometh 0.99961 3.9344e-03 weaklyHypometh 1 0.15737433 insignificant -0.0900313 3.0001e-02 weaklyHypometh 0.8333650 insignificant chr1 112005931 112006931 2627 ENSG00000201028 0.7968629 271 8 0.713033 235 8 0.742249 163 6 0.81797731 168 8 0.785137 111 8 0.752646 401 8 0.779584 150 6 0.808536 249 8 0.789855 159 6 0.689394 188 8 0.7907296 257 8 0.7622024 75 5 0.706165 213 8 0.9000000 34 2 0.852388 167 6 0.7743845 85 6 0.7787698 59 5 0.8396684 196 8 0.8268483 225 8 0.772608 308 8 0.876603 55 6 0.6987082 104 8 0.811649 188 8 0.743148 88 6 0.8045536 80 8 0.7641472 311 8 0.812360 106 8 0.837013 33 3 0.805322 257 7 0.8149079 332 8 0.7527565 329 8 0.7905248 428 8 0.666589 239 8 0.7194478 189 8 0.73036 194 8 0.690327 97 5 0.6388348 93 8 0.7521726 313 8 0.7954709 235 8 0.7918572 261 8 0.767120 240 8 0.744527 251 8 0.841135 238 8 0.7560896 0.741658 0.672117 0.8046580 0.756504 0.756542 0.7110284 0.802117 0.747109 0.7532224 0.782964 0.6943175 0.704744 0.7671795 0.808086 0.7309343 0.705053 0.8383560 0.8106124 0.7435333 0.8589316 0.7063965 0.8123531 0.7662764 0.8045740 0.7473578 0.7539920 0.7944047 0.753320 0.7802211 0.7355237 0.8005145 0.6841566 0.6750131 0.695728 0.697359 0.6873978 0.702533 0.7872573 0.7760850 0.774544 0.7569526 0.835599 6 0.7684437 0.7879706 -0.01613269 8 0.725921 0.824550 -0.09862927 0.980010 1.4142e-01 insignificant 1 1.0000000 insignificant 0.93238 2.2619e-01 insignificant 1 1.0000000 insignificant -0.00868913 0.6268658 insignificant 1 insignificant 0.7684437 0.7093333 0.0598033 8 0.725921 0.7673751 -0.04145431 8.5824e-06 0.953732 weaklyHypermeth 3.5662e-04 1 weaklyHypermeth 1.0473e-05 0.9826700 weaklyHypermeth 1.0473e-03 1 weaklyHypermeth 0.0843308 2.3426e-03 weaklyHypermeth 1.4642e-01 insignificant 0.7687534 0.7893878 -0.02747074 8 0.765734 0.78932294 -0.0235886 0.69076926 1.0279e-01 insignificant 1.00000 1.000000 insignificant 0.397006 3.2423e-01 insignificant 1 1.000000 insignificant -0.0040701 0.84136419 insignificant 1.000000 insignificant 0.7879706 0.7093333 0.07830273 8 0.824550 0.7673751 0.057175 1.3981e-05 0.999994 weaklyHypermeth 7.3586e-04 1 weaklyHypermeth 1.4702e-04 0.999998 weaklyHypermeth 9.8013e-03 1 weaklyHypermeth 0.093020 1.3703e-03 weaklyHypermeth 0.08564414 weaklyHypermeth 0.7876950 0.7893878 -0.0093037 8 0.7806876 0.78932294 -0.0086353 0.4400312 4.1222e-01 insignificant 1.0000 1.000000 insignificant 0.3575519 0.8249314 insignificant 1 1 insignificant 0.0046191 0.8310941 insignificant 1.00000 insignificant 0.7088157 0.7893878 -0.08646140 8 0.7092189 0.78932294 -0.0801040 0.9999613 4.9133e-04 weaklyHypometh 1.00000 1.9653e-02 weaklyHypometh 0.99998 3.9920e-04 weaklyHypometh 1 0.02661355 weaklyHypometh -0.0884008 4.6737e-03 weaklyHypometh 0.2407922 insignificant chr1 112065231 112066231 2629 ENSG00000201028 0.9240017 116 5 0.793235 189 5 0.842512 206 5 0.97142857 27 3 0.853736 77 5 0.923417 152 5 0.932378 164 5 0.856208 149 5 0.839505 152 5 0.918990 141 5 0.9224274 208 5 0.6581419 91 5 0.843401 208 5 NA 0 0 0.895422 155 5 0.9161905 127 5 0.8869649 87 5 0.9401515 37 3 0.9280399 163 5 0.887964 130 5 0.895092 65 5 0.9600000 16 1 0.872162 202 5 0.836937 54 5 1.0000000 3 0 0.9140758 247 5 0.960897 79 5 0.900000 33 5 0.899207 224 5 0.9339937 287 5 0.9326029 250 5 0.8983952 227 5 0.646487 202 5 0.8355556 167 5 0.84000 158 5 0.644444 27 3 0.7200244 80 5 0.8283904 272 5 0.9095094 137 5 0.9136197 136 5 0.858120 41 5 0.890566 137 5 0.906667 49 5 0.9265530 0.804006 0.858431 0.9709821 0.869793 0.889386 0.9350672 0.862323 0.843687 0.9232278 0.922900 0.5311485 0.801577 NA 0.897389 0.9076265 0.894774 0.9206617 0.9405923 0.8250937 0.8923935 0.9296875 0.8797947 0.8547764 0.9790068 0.9255759 0.9541016 0.9148438 0.895844 0.9304144 0.9286800 0.8927154 0.6455010 0.8388310 0.900000 0.729167 0.7546503 0.831701 0.9166498 0.9251543 0.878205 0.9093918 0.835937 3 0.8829003 0.9128631 -0.02941734 5 0.884514 0.908087 -0.02357308 0.973195 1.8238e-01 insignificant 1 1.0000000 insignificant 0.96944 1.7373e-01 insignificant 1 1.0000000 insignificant -0.03620392 0.0869107 lowCoverage 1 lowCoverage 0.8829003 0.8090508 0.0772942 5 0.884514 0.7777169 0.10679678 3.4114e-04 0.922494 weaklyHypermeth 9.7469e-03 1 weaklyHypermeth 1.0279e-01 0.8952336 insignificant 1.0000e+00 1 insignificant 0.1282592 1.8331e-02 lowCoverage 7.3322e-01 lowCoverage 0.8829003 0.9020000 -0.02003850 5 0.884514 0.90269943 -0.0181858 0.73324619 4.0215e-01 insignificant 1.00000 1.000000 insignificant 0.596316 3.3149e-01 insignificant 1 1.000000 insignificant -0.0149533 0.44056521 lowCoverage 1.000000 lowCoverage 0.9128631 0.8090508 0.10308002 5 0.908087 0.7777169 0.130370 1.5419e-03 0.994073 weaklyHypermeth 4.2830e-02 1 weaklyHypermeth 1.3937e-02 0.992830 weaklyHypermeth 3.1257e-01 1 insignificant 0.164463 6.3611e-03 lowCoverage 0.27656823 lowCoverage 0.9128631 0.9020000 0.0094747 5 0.9080867 0.90269943 0.0053873 0.3908962 6.1964e-01 insignificant 1.0000 1.000000 insignificant 0.6071996 0.6075053 insignificant 1 1 insignificant 0.0212506 0.2114287 lowCoverage 1.00000 lowCoverage 0.8090508 0.9020000 -0.09769791 5 0.7777169 0.90269943 -0.1249826 0.9546123 5.7908e-02 insignificant 1.00000 8.1561e-01 insignificant 0.91656 1.9018e-01 insignificant 1 1.00000000 insignificant -0.1432125 1.2398e-02 lowCoverage 0.4915761 lowCoverage chr1 112734431 112735431 2633 ENSG00000209263 0.6491270 552 14 0.572760 870 14 0.448355 330 14 0.67751503 388 13 0.706486 903 11 0.734601 636 14 0.637749 790 14 0.659476 643 14 0.595224 719 14 0.711886 764 14 0.6511196 923 14 0.5120176 736 14 0.667115 786 14 0.7588745 107 11 0.641924 776 14 0.6342509 690 14 0.5789563 687 11 0.6397316 433 13 0.6428367 773 14 0.661748 536 14 0.673698 205 9 0.7423613 205 10 0.616932 364 14 0.621353 221 13 0.6611460 196 10 0.6388893 396 14 0.574231 184 12 0.653825 210 12 0.703611 634 13 0.6423719 455 14 0.6770918 468 14 0.6827020 802 14 0.379415 730 14 0.3600964 492 14 0.44643 596 13 0.405812 86 8 0.4864023 336 13 0.4822092 398 14 0.6590317 463 14 0.6622588 408 13 0.699715 436 13 0.635517 387 13 0.678659 407 13 0.7227681 0.662921 0.589971 0.7416835 0.756837 0.785833 0.7166336 0.720268 0.697484 0.7848872 0.721156 0.6220429 0.754971 0.7878403 0.731649 0.6966548 0.687276 0.7410390 0.7209046 0.7371626 0.7006212 0.7461348 0.6904308 0.6520797 0.7184373 0.7192754 0.6410065 0.7128694 0.721643 0.7197205 0.7551184 0.7297480 0.5615881 0.5716953 0.654495 0.608765 0.5997118 0.591497 0.7453766 0.7693368 0.729787 0.7403051 0.770012 9 0.6808772 0.6705910 0.00736095 14 0.633964 0.665726 -0.03176227 0.353963 2.9882e-01 insignificant 1 1.0000000 insignificant 0.51737 1.4328e-01 insignificant 1 1.0000000 insignificant -0.01826326 0.3805267 insignificant 1 insignificant 0.6808772 0.5858931 0.1050717 14 0.633964 0.4859844 0.14797973 5.0341e-26 0.998644 weaklyHypermeth 1.0068e-23 1 weaklyHypermeth 4.9132e-11 0.9999888 weaklyHypermeth 4.9132e-08 1 weaklyHypermeth 0.2123602 7.1413e-06 hypermethylated 6.4921e-04 hypermethylated 0.6808772 0.7106140 -0.02158011 13 0.633964 0.67056046 -0.0365964 0.56981833 1.5016e-02 weaklyHypometh 1.00000 1.000000 insignificant 0.672435 1.0583e-01 insignificant 1 1.000000 insignificant -0.0279485 0.16421317 insignificant 1.000000 insignificant 0.6707373 0.5856710 0.12576866 14 0.670993 0.4556103 0.215383 2.2011e-19 0.998691 weaklyHypermeth 4.4021e-17 1 weaklyHypermeth 3.9842e-08 1.000000 weaklyHypermeth 1.9921e-05 1 weaklyHypermeth 0.230623 1.0552e-05 hypermethylated 0.00117244 hypermethylated 0.6705910 0.7106140 -0.0334425 13 0.6657264 0.67056046 -0.0048341 0.4731437 7.7088e-02 insignificant 1.0000 1.000000 insignificant 0.6091407 0.1579507 insignificant 1 1 insignificant -0.0096852 0.5681583 insignificant 1.00000 insignificant 0.5858931 0.7106140 -0.16443839 13 0.4859844 0.67056046 -0.1845761 0.9985437 3.2612e-14 weaklyHypometh 1.00000 6.5224e-12 weaklyHypometh 0.99999 9.5150e-07 weaklyHypometh 1 0.00053737 weaklyHypometh -0.2403087 1.8754e-05 hypomethylated 0.0031257 hypomethylated chr1 112858731 112859731 2636 WNT2B ENSG00000134245 0.9639097 274 6 0.913415 88 6 0.953102 125 6 0.94414095 309 6 1.000000 69 6 0.930698 308 6 0.899311 75 6 0.951054 138 6 0.910044 134 6 0.920971 138 6 0.9611561 316 6 0.8075369 70 6 0.791408 135 6 0.9613636 104 6 0.967280 221 6 0.9319728 89 6 0.9444444 16 3 0.9487964 275 6 0.9281616 258 6 0.949173 263 6 0.809524 44 4 0.8879221 84 5 0.932471 141 6 0.957778 69 5 0.9707792 44 5 0.9522619 179 6 0.943434 68 4 0.964420 71 5 0.965062 149 6 0.9334972 137 6 0.9496795 96 6 0.8149098 181 6 0.903854 116 6 1.0000000 53 6 0.98889 89 6 0.950000 25 4 0.9740260 66 6 0.7921014 144 6 0.9623810 214 6 0.9606990 279 6 0.958425 246 6 0.956993 187 6 0.981944 174 6 0.9632918 0.884565 0.947298 0.9306227 1.000000 0.897426 0.8455593 0.939640 0.908964 0.9059140 0.929756 0.7932276 0.908584 0.9572849 0.963261 0.9255952 0.951820 0.9212801 0.9240107 0.9347107 0.9673059 0.8768026 0.8967340 0.9547421 0.9492115 0.9032437 0.9274689 0.9419299 0.977893 0.8995114 0.9492660 0.9542443 0.8822025 1.0000000 0.992560 0.919643 0.9671266 0.909581 0.9624554 0.9477981 0.933462 0.9563590 0.968006 4 0.9295154 0.9310618 -0.00204305 6 0.940537 0.922347 0.01819048 0.494290 3.9508e-01 insignificant 1 1.0000000 insignificant 0.56212 6.6073e-02 insignificant 1 1.0000000 insignificant 0.00541874 0.7863158 insignificant 1 insignificant 0.9294118 0.9432049 -0.0139407 6 0.933105 0.8976819 0.03542262 6.7986e-01 0.140010 insignificant 1.0000e+00 1 insignificant 9.5879e-01 0.0093930 weaklyHypometh 1.0000e+00 1 insignificant -0.0059148 8.6607e-01 insignificant 1.0000e+00 insignificant 0.9295154 0.9600000 -0.02948646 6 0.940537 0.97308601 -0.0325486 0.99916916 4.0450e-02 weaklyHypometh 1.00000 1.000000 insignificant 0.999389 1.9719e-02 weaklyHypometh 1 1.000000 insignificant -0.0351916 0.00778039 weaklyHypometh 0.707308 insignificant 0.9309524 0.9432049 -0.01045260 6 0.912640 0.8976819 0.014958 6.0871e-01 0.113566 insignificant 1.0000e+00 1 insignificant 8.9742e-01 0.066138 insignificant 1.0000e+00 1 insignificant -0.011334 7.5922e-01 insignificant 1.00000000 insignificant 0.9310618 0.9600000 -0.0238622 6 0.9223469 0.97308601 -0.0507391 0.9989785 1.3655e-01 insignificant 1.0000 1.000000 insignificant 0.9983213 0.5035327 insignificant 1 1 insignificant -0.0406104 0.0324633 weaklyHypometh 1.00000 insignificant 0.9432049 0.9599636 -0.01401265 6 0.8976819 0.96972176 -0.0720398 0.7969320 1.5973e-01 insignificant 1.00000 1.0000e+00 insignificant 0.47268 8.9905e-01 insignificant 1 1.00000000 insignificant -0.0292768 4.0185e-01 insignificant 1.0000000 insignificant chr1 113138531 113139531 2647 ENSG00000198789 0.4929166 246 5 0.302030 116 5 0.423373 104 5 0.44820779 174 5 0.424176 93 5 0.517182 220 5 0.397016 138 5 0.475085 123 5 0.482609 96 5 0.509339 82 5 0.4794449 186 5 0.4166165 68 5 0.404915 93 3 0.3514286 47 5 0.509615 82 5 0.2941176 45 3 0.2865741 40 3 0.4518157 155 5 0.5550000 93 5 0.528719 163 5 0.496212 39 5 0.5503968 42 5 0.477950 127 5 0.392527 61 5 0.4861794 62 3 0.4785888 147 5 0.689706 44 3 0.530857 51 3 0.515970 103 5 0.4801722 130 5 0.4804586 178 5 0.5078124 227 5 0.389602 73 5 0.4676637 98 5 0.32995 49 5 0.653968 39 3 0.4466667 76 5 0.4321886 134 5 0.5254971 199 5 0.5342349 247 5 0.498085 226 5 0.493642 190 5 0.505111 224 5 0.4868095 0.265527 0.436016 0.4436494 0.442378 0.502593 0.4006654 0.491947 0.478163 0.5322834 0.496333 0.4716674 0.456808 0.4002532 0.530721 0.3940636 0.308883 0.4381483 0.5594514 0.5196162 0.5145798 0.4983528 0.4509253 0.3956965 0.4789300 0.4561988 0.7518960 0.5402156 0.520908 0.4903975 0.4647015 0.4815041 0.3617796 0.4583973 0.306474 0.618848 0.4270440 0.418231 0.5428151 0.5422104 0.500479 0.4905683 0.502248 3 0.4653130 0.4805945 -0.01521805 5 0.468320 0.489509 -0.02118864 0.805811 2.7003e-01 insignificant 1 1.0000000 insignificant 0.75739 8.0157e-02 insignificant 1 1.0000000 insignificant -0.06972688 0.0149086 lowCoverage 1 lowCoverage 0.4653130 0.4371002 0.0253271 5 0.468320 0.4445459 0.02377437 1.9440e-02 0.574107 weaklyHypermeth 3.2301e-01 1 insignificant 6.0091e-02 0.3250254 insignificant 1.0000e+00 1 insignificant -0.0158300 7.5271e-01 lowCoverage 1.0000e+00 lowCoverage 0.4653130 0.5110497 -0.04223368 5 0.468320 0.51196817 -0.0436479 0.44770070 3.8568e-02 weaklyHypometh 1.00000 1.000000 insignificant 0.849518 2.1676e-02 weaklyHypometh 1 1.000000 insignificant -0.0738050 0.00093885 lowCoverage 0.156475 lowCoverage 0.4805945 0.4371002 0.04073137 5 0.489509 0.4445459 0.044963 5.0562e-02 0.781015 insignificant 6.4823e-01 1 insignificant 3.7832e-02 0.736705 weaklyHypermeth 6.6372e-01 1 insignificant 0.053897 3.0799e-01 lowCoverage 1.00000000 lowCoverage 0.4805945 0.5110497 -0.0271130 5 0.4895090 0.51196817 -0.0224592 0.3879898 2.9505e-02 weaklyHypometh 1.0000 1.000000 insignificant 0.7028499 0.1691173 insignificant 1 1 insignificant -0.0040781 0.8521940 lowCoverage 1.00000 lowCoverage 0.4371002 0.5110497 -0.06640419 5 0.4445459 0.51196817 -0.0674222 0.9011112 4.2051e-03 weaklyHypometh 1.00000 1.2368e-01 insignificant 0.92943 2.6565e-02 weaklyHypometh 1 0.56521321 insignificant -0.0579750 2.5555e-01 lowCoverage 1.0000000 lowCoverage chr1 113186531 113187531 2649 ENSG00000198789 0.5940716 90 5 0.624453 97 5 0.419926 55 4 0.65141114 100 5 0.548521 45 5 0.645999 131 5 0.595238 35 3 0.744942 74 4 0.752778 21 2 0.514286 34 4 0.6606658 139 6 0.2500000 13 0 0.651455 55 5 0.4947090 27 2 0.623377 38 4 0.4500000 14 2 0.0000000 3 0 0.7286073 66 5 0.5372863 65 4 0.654135 81 4 0.753333 27 3 0.7222222 32 3 0.448016 58 4 0.553061 44 4 0.7723077 43 5 0.5792300 141 4 0.452778 46 4 0.660204 21 2 0.698413 76 5 0.6022049 126 5 0.6503001 142 5 0.5325000 98 5 0.630840 85 4 0.5391534 52 4 0.78410 111 4 0.791667 11 0 0.5383838 57 5 0.6281690 112 5 0.6349638 75 5 0.7392063 109 5 0.766826 110 5 0.541667 38 2 0.841409 93 5 0.7786239 0.552787 0.581561 0.7836926 0.662637 0.761758 0.6798246 0.825901 0.806140 0.6334586 0.737345 0.4635974 0.769632 0.6752297 0.728640 0.5162290 0.113691 0.7075891 0.6958839 0.7133369 0.7321272 0.7240546 0.6572682 0.8082707 0.7686235 0.6602944 0.5416667 0.7124060 0.811795 0.7621034 0.7509022 0.7039474 0.7599679 0.6395155 0.629799 0.947368 0.6044657 0.713825 0.7583361 0.7448413 0.772392 0.8026316 0.867404 0 0.6759729 0.6920375 -0.02131110 4 0.612811 0.568984 0.04382684 0.410494 5.9141e-01 lowCoverage 1 1.0000000 lowCoverage 0.58163 7.5236e-01 lowCoverage 1 1.0000000 lowCoverage -0.06162116 0.2346884 lowCoverage 1 lowCoverage 0.6751269 0.6378505 0.0302200 4 0.487811 0.6899584 -0.20214771 3.1060e-01 0.760718 lowCoverage 1.0000e+00 1 lowCoverage 8.6171e-01 0.4490934 lowCoverage 1.0000e+00 1 lowCoverage -0.0949597 1.4216e-01 lowCoverage 1.0000e+00 lowCoverage 0.6771453 0.7341176 -0.06826034 5 0.608748 0.64076055 -0.0320130 0.70287880 3.9514e-02 weaklyHypometh 1.00000 1.000000 insignificant 0.745831 1.9505e-02 weaklyHypometh 1 1.000000 insignificant -0.1477214 0.05088657 lowCoverage 1.000000 lowCoverage 0.6916764 0.6370023 0.05742670 4 0.507410 0.6456667 -0.138257 5.3598e-02 0.672254 lowCoverage 6.6492e-01 1 lowCoverage 8.0438e-01 0.497431 lowCoverage 1.0000e+00 1 lowCoverage -0.033339 5.6402e-01 lowCoverage 1.00000000 lowCoverage 0.6924883 0.7341176 -0.0398878 4 0.5919784 0.64076055 -0.0487821 0.7806968 8.0436e-02 lowCoverage 1.0000 1.000000 lowCoverage 0.8844751 0.2032443 lowCoverage 1 1 lowCoverage -0.0861002 0.2024404 lowCoverage 1.00000 lowCoverage 0.6361502 0.7341176 -0.09906652 4 0.5866112 0.64076055 -0.0541494 0.8966339 4.1284e-04 lowCoverage 1.00000 1.7202e-02 lowCoverage 0.68786 3.6318e-02 lowCoverage 1 0.69841792 lowCoverage -0.0527617 4.7048e-01 lowCoverage 1.0000000 lowCoverage chr1 113277231 113278231 2655 ENSG00000217526 0.7567765 252 7 0.588800 110 7 0.586735 34 3 0.70622579 248 7 0.661538 64 7 0.722732 101 7 0.626190 33 3 0.644589 129 6 0.870370 20 0 0.825397 41 4 0.7034500 169 6 0.6921769 21 1 0.679029 75 8 0.7486111 60 6 0.927083 48 3 0.7410714 25 3 0.4333333 18 1 0.7552740 199 7 0.6166667 18 3 0.661045 64 5 0.845238 54 6 0.6428571 10 0 0.722774 156 7 0.849181 60 6 0.6234280 106 6 0.7265983 100 7 0.625591 51 4 0.813333 12 1 0.739682 99 7 0.8323304 95 6 0.7726190 87 7 0.6832011 135 6 0.738532 85 7 0.5518466 86 6 0.78431 53 3 0.875000 7 0 0.6326138 65 6 0.7714286 96 7 0.7660142 244 7 0.7366460 332 7 0.723279 202 7 0.739230 180 7 0.822843 254 7 0.7947854 0.539879 0.620460 0.7520788 0.724120 0.741586 0.6844633 0.765276 0.822034 0.7925747 0.761611 0.7336562 0.673123 0.7427495 0.847458 0.7599668 0.750451 0.8222387 0.6214478 0.7073951 0.8418079 0.7203390 0.7845519 0.8530615 0.5834617 0.7796263 0.6615167 0.8222429 0.697176 0.8090853 0.8326271 0.6692561 0.6479368 0.6871148 0.761751 0.856300 0.6740780 0.806780 0.8322260 0.7896270 0.747777 0.8503920 0.895690 0 0.7288528 0.7564767 -0.01794517 7 0.743146 0.762316 -0.01917009 0.902160 1.0525e-01 insignificant 1 1.0000000 insignificant 0.97969 3.6796e-01 insignificant 1 1.0000000 insignificant -0.04238134 0.2265254 lowCoverage 1 lowCoverage 0.7284884 0.7295918 0.0122246 6 0.731873 0.7168662 0.01500671 4.5831e-01 0.760467 insignificant 1.0000e+00 1 insignificant 4.6303e-01 0.8938105 insignificant 1.0000e+00 1 insignificant -0.0282677 6.0892e-01 lowCoverage 1.0000e+00 lowCoverage 0.7284884 0.8011551 -0.05887736 7 0.731873 0.78464890 -0.0527760 0.98783183 3.2576e-02 weaklyHypometh 1.00000 1.000000 insignificant 0.952447 1.2555e-01 insignificant 1 1.000000 insignificant -0.0602477 0.05898803 lowCoverage 1.000000 lowCoverage 0.7562500 0.7295918 0.02785084 6 0.757606 0.7168662 0.040740 4.0810e-02 0.902090 weaklyHypermeth 5.5148e-01 1 insignificant 1.4192e-01 0.976493 insignificant 1.0000e+00 1 insignificant 0.014114 7.9729e-01 lowCoverage 1.00000000 lowCoverage 0.7562500 0.8011551 -0.0433326 7 0.7576059 0.78464890 -0.0270430 0.9050071 2.7811e-01 insignificant 1.0000 1.000000 insignificant 0.8040622 0.4318927 insignificant 1 1 insignificant -0.0178663 0.5613684 insignificant 1.00000 insignificant 0.7295918 0.8011551 -0.07479030 6 0.7168662 0.78464890 -0.0677827 0.9286024 1.8970e-02 weaklyHypometh 1.00000 3.3281e-01 insignificant 0.98736 7.0829e-02 insignificant 1 1.00000000 insignificant -0.0319799 5.4813e-01 lowCoverage 1.0000000 lowCoverage chr1 113552231 113553231 2664 ENSG00000218094 0.5774310 132 7 0.662795 156 7 0.564286 33 4 0.56402116 119 7 0.606679 61 7 0.633107 169 7 0.473021 70 7 0.600595 87 7 0.433333 26 2 0.700000 30 4 0.6010993 104 7 0.5714286 17 0 0.665909 64 7 0.7455782 47 7 0.438776 41 4 0.4523810 23 0 NA 0 0 0.7335596 159 6 0.6645873 110 7 0.572669 91 7 0.678571 21 0 0.6000000 6 0 0.793750 68 7 0.562500 15 0 0.7745859 74 3 0.7683048 136 7 0.764626 40 7 0.750000 5 0 0.771542 89 7 0.6638362 122 7 0.6251735 112 7 0.5776099 139 7 0.714547 104 7 0.6083333 52 7 0.72251 138 7 0.571429 11 0 0.6860076 91 7 0.6427511 114 7 0.5492302 89 7 0.6223250 155 7 0.673475 151 7 0.542758 88 7 0.721429 110 7 0.5689889 0.627995 0.572581 0.5718041 0.633850 0.581657 0.4687718 0.593414 0.454839 0.6935484 0.691957 0.5806452 0.677639 0.7315668 0.430876 0.4516129 NA 0.6915072 0.6792757 0.5274587 0.7016129 0.6805645 0.7682796 0.6290323 0.7903810 0.7694540 0.7711214 0.8086133 0.782770 0.6714866 0.5847497 0.6669621 0.7408130 0.5892473 0.728139 0.612903 0.6953132 0.657047 0.5555825 0.6309405 0.684993 0.5567637 0.736175 0 0.6042885 0.6711004 -0.06657330 7 0.635371 0.668296 -0.03292479 0.983180 1.9515e-03 weaklyHypometh 1 0.9757508 insignificant 0.96309 9.6148e-05 weaklyHypometh 1 0.0480741 weaklyHypometh -0.10151056 0.0048764 lowCoverage 1 lowCoverage 0.6042885 0.6568627 -0.0515972 7 0.635371 0.7148542 -0.07948295 9.6291e-01 0.027833 weaklyHypometh 1.0000e+00 1 insignificant 7.6470e-01 0.0065282 weaklyHypometh 1.0000e+00 1 insignificant -0.0648993 6.8631e-02 insignificant 1.0000e+00 insignificant 0.6033920 0.6222597 -0.01993985 7 0.607091 0.63267019 -0.0255793 0.82965092 3.1503e-01 insignificant 1.00000 1.000000 insignificant 0.759181 4.3790e-01 insignificant 1 1.000000 insignificant -0.0291456 0.49723000 insignificant 1.000000 insignificant 0.6711004 0.6568627 0.02104808 7 0.668296 0.7148542 -0.046558 3.3331e-01 0.630913 insignificant 1.0000e+00 1 insignificant 1.0152e-01 0.932745 insignificant 1.0000e+00 1 insignificant 0.036611 3.1443e-01 lowCoverage 1.00000000 lowCoverage 0.6727717 0.6222597 0.0495598 7 0.6923383 0.63267019 0.0596681 0.0393293 9.3757e-01 weaklyHypermeth 1.0000 1.000000 insignificant 0.0071318 0.9967491 weaklyHypermeth 1 1 insignificant 0.0723649 0.1270334 lowCoverage 1.00000 lowCoverage 0.6561886 0.6222597 0.02922813 7 0.6741191 0.63267019 0.0414489 0.1137754 8.4334e-01 insignificant 1.00000 1.0000e+00 insignificant 0.27546 7.1461e-01 insignificant 1 1.00000000 insignificant 0.0357536 4.2738e-01 insignificant 1.0000000 insignificant chr1 113800131 113801131 2671 ENSG00000213300 0.8284568 312 10 0.717511 180 10 0.715808 144 10 0.78626374 187 10 0.733214 62 9 0.808363 241 10 0.749784 89 9 0.747661 125 7 0.776165 105 6 0.876385 123 10 0.7897519 245 10 0.6208333 84 8 0.841721 109 10 0.8500000 19 3 0.782857 101 10 0.8389744 75 7 0.8280303 50 3 0.8498853 196 10 0.7456143 163 10 0.847910 224 10 0.835417 29 3 0.7890476 63 10 0.793920 196 10 0.742347 37 4 0.8614286 64 7 0.7907825 192 10 0.923333 57 5 0.579365 31 4 0.811088 80 4 0.7568768 159 10 0.8215179 218 10 0.8717172 300 10 0.848590 105 8 0.7457143 115 10 0.65225 139 10 0.819728 61 7 0.6673856 77 7 0.7367821 204 10 0.8545578 269 10 0.8376144 300 10 0.809684 228 10 0.829796 240 10 0.807130 323 10 0.8419117 0.757792 0.771879 0.8454345 0.770857 0.824252 0.7329524 0.782179 0.798699 0.8808525 0.794251 0.6991667 0.854379 0.8349150 0.813190 0.8213718 0.818220 0.8621754 0.7809147 0.8378364 0.8183263 0.7497381 0.7893082 0.7258739 0.8785714 0.8118480 0.8889444 0.6600281 0.859792 0.7753758 0.8358944 0.8436952 0.8132308 0.7481696 0.681555 0.777549 0.6795350 0.773340 0.8677058 0.8428958 0.828096 0.8507417 0.814895 4 0.8038109 0.8103933 -0.00178909 10 0.810077 0.780048 0.03002847 0.705599 2.7308e-01 insignificant 1 1.0000000 insignificant 0.69010 1.3758e-01 insignificant 1 1.0000000 insignificant -0.01131063 0.6942602 insignificant 1 insignificant 0.8037416 0.7546362 0.0550949 10 0.791084 0.7464644 0.04462005 2.0463e-03 0.966142 weaklyHypermeth 4.5473e-02 1 weaklyHypermeth 2.8841e-02 0.8910009 weaklyHypermeth 6.7072e-01 1 insignificant 0.0416840 2.7322e-01 insignificant 1.0000e+00 insignificant 0.8037416 0.8338235 -0.02842499 10 0.791084 0.82582819 -0.0347437 0.99212645 1.2290e-01 insignificant 1.00000 1.000000 insignificant 0.980635 1.8558e-01 insignificant 1 1.000000 insignificant -0.0409968 0.02185031 weaklyHypometh 1.000000 insignificant 0.8108298 0.7546362 0.05899942 10 0.808053 0.7464644 0.061589 2.7782e-03 0.969365 weaklyHypermeth 6.4610e-02 1 weaklyHypermeth 3.9470e-02 0.975396 weaklyHypermeth 6.8053e-01 1 insignificant 0.052995 2.1761e-01 insignificant 1.00000000 insignificant 0.8108298 0.8338235 -0.0244906 10 0.8080531 0.82582819 -0.0177750 0.9137142 2.0407e-01 insignificant 1.0000 1.000000 insignificant 0.7239621 0.6015132 insignificant 1 1 insignificant -0.0296862 0.2765036 insignificant 1.00000 insignificant 0.7546362 0.8338235 -0.08368562 10 0.7464644 0.82582819 -0.0793638 0.9996292 1.2345e-03 weaklyHypometh 1.00000 4.0154e-02 weaklyHypometh 0.99704 4.2423e-03 weaklyHypometh 1 0.16033349 insignificant -0.0826808 4.9604e-02 weaklyHypometh 1.0000000 insignificant chr1 115998731 115999731 2715 VANGL1 ENSG00000173218 0.5644743 193 6 0.451951 195 6 0.622583 101 5 0.58742317 169 6 0.508618 88 3 0.575537 215 6 0.372532 125 6 0.602824 154 6 0.612267 138 3 0.601703 101 3 0.6280914 191 6 0.4936869 75 3 0.396916 138 3 0.6294444 47 2 0.467798 142 5 0.3784091 60 4 0.3109776 90 3 0.5630611 150 4 0.6061662 78 3 0.557242 165 6 0.404924 55 6 0.4307672 104 4 0.662961 142 6 0.409093 92 6 0.6182692 93 6 0.5839584 209 6 0.418123 92 4 0.320379 70 4 0.538919 85 4 0.6444338 168 6 0.4763862 195 6 0.5966810 255 6 0.509247 114 4 0.2804657 133 6 0.48749 232 6 0.195944 120 5 0.2809799 107 5 0.3238954 187 6 0.4713599 271 6 0.6786733 196 6 0.549006 148 6 0.449904 205 4 0.559782 254 6 0.4872091 0.280650 0.424921 0.4571041 0.316621 0.469136 0.2956127 0.391264 0.372489 0.3023594 0.518344 0.2403895 0.260931 0.3240865 0.281626 0.2740651 0.221030 0.2590450 0.3020446 0.4278834 0.4401712 0.1478905 0.4524959 0.3776817 0.3882423 0.3884424 0.3288894 0.3174361 0.306787 0.4337975 0.3112872 0.3532001 0.5005326 0.1397284 0.376726 0.196637 0.2768274 0.371105 0.2820605 0.4618456 0.297216 0.3079029 0.375161 3 0.4118547 0.4557692 -0.00866704 6 0.479039 0.375836 0.10320335 0.988884 8.6179e-01 insignificant 1 1.0000000 insignificant 0.46764 9.5942e-01 insignificant 1 1.0000000 insignificant 0.01784397 0.6546635 lowCoverage 1 lowCoverage 0.4121699 0.3975364 0.0235533 6 0.538919 0.3302467 0.20867254 5.4319e-05 0.597773 weaklyHypermeth 1.8106e-03 1 weaklyHypermeth 1.1576e-04 0.9834905 weaklyHypermeth 8.2689e-03 1 weaklyHypermeth 0.1802474 1.4302e-02 lowCoverage 6.2183e-01 lowCoverage 0.4117196 0.4301676 0.00375709 6 0.473051 0.49482156 -0.0217710 0.82175816 3.3218e-01 insignificant 1.00000 1.000000 insignificant 0.670287 4.4913e-01 insignificant 1 1.000000 insignificant -0.0151598 0.75164100 lowCoverage 1.000000 lowCoverage 0.4572347 0.3975364 0.06570158 6 0.422815 0.3302467 0.092569 1.1081e-04 0.763320 weaklyHypermeth 4.8176e-03 1 weaklyHypermeth 1.6022e-03 0.907219 weaklyHypermeth 6.8247e-02 1 weaklyHypermeth 0.162403 2.4659e-02 weaklyHypermeth 0.77060884 insignificant 0.4587097 0.4301676 0.0112028 6 0.4832177 0.49482156 -0.0116038 0.4390710 5.4896e-01 insignificant 1.0000 1.000000 insignificant 0.5306200 0.3766990 insignificant 1 1 insignificant -0.0330038 0.5393958 insignificant 1.00000 insignificant 0.3979821 0.4301676 -0.06539102 6 0.3774248 0.49482156 -0.1173967 0.8896390 1.4845e-02 weaklyHypometh 1.00000 2.8010e-01 insignificant 0.99688 1.3360e-02 weaklyHypometh 1 0.36960770 insignificant -0.1954073 1.5111e-02 weaklyHypometh 0.5210818 insignificant chr1 116511931 116512931 2722 C1orf161 ENSG00000173212 0.0714441 1193 21 0.154596 705 21 0.071343 470 20 0.02933903 736 20 0.052209 438 21 0.109521 1062 20 0.048133 587 22 0.098647 566 22 0.115458 697 20 0.128472 658 20 0.0866259 908 21 0.0242727 567 20 0.111099 473 18 0.0519011 142 8 0.106882 580 20 0.0163926 722 21 0.0091684 1679 17 0.0562167 1542 20 0.0265524 636 21 0.040217 949 20 0.038011 319 21 0.0508120 470 16 0.065889 696 21 0.028779 346 20 0.1176747 900 17 0.0331409 819 21 0.054138 670 22 0.056103 302 19 0.063219 611 20 0.1160138 850 20 0.1187533 920 20 0.0929513 982 20 0.040431 531 20 0.0253566 615 20 0.20522 381 15 0.072623 452 16 0.1236342 399 21 0.0679621 806 21 0.0739520 1083 21 0.0832925 1075 22 0.059246 889 19 0.058905 1397 20 0.065965 821 22 0.0448087 0.018468 0.102943 0.0212404 0.027420 0.026793 0.0563457 0.010361 0.010536 0.0060957 0.025176 0.0263840 0.040983 0.0317657 0.032385 0.0109856 0.016400 0.0239354 0.0184546 0.0134215 0.0269913 0.0330361 0.0294786 0.0031945 0.0385620 0.0387348 0.0082994 0.0362911 0.021195 0.0295073 0.0327580 0.0127308 0.0097193 0.0196510 0.172816 0.044187 0.0427449 0.031878 0.0644980 0.0232928 0.029450 0.0099097 0.049936 18 0.0268487 0.0321270 -0.00464439 21 0.143940 0.136667 0.00727244 0.847315 9.6379e-01 insignificant 1 1.0000000 insignificant 0.78643 9.9991e-01 insignificant 1 1.0000000 insignificant 0.00080077 0.9527085 insignificant 1 insignificant 0.0266876 0.0725730 -0.0331704 21 0.111193 0.1245633 -0.01337050 7.6683e-01 0.064745 insignificant 1.0000e+00 1 insignificant 6.7294e-01 0.8952182 insignificant 1.0000e+00 1 insignificant -0.0187806 5.3387e-01 insignificant 1.0000e+00 insignificant 0.0260807 0.0381839 -0.01193789 21 0.109072 0.06667701 0.0423947 0.95254445 3.7751e-02 weaklyHypometh 1.00000 1.000000 insignificant 0.985144 5.3184e-02 insignificant 1 1.000000 insignificant 0.0021522 0.83762993 insignificant 1.000000 insignificant 0.0319298 0.0725730 -0.02785215 21 0.107420 0.1245633 -0.017143 8.0548e-01 0.171936 insignificant 1.0000e+00 1 insignificant 9.6605e-01 0.712923 insignificant 1.0000e+00 1 insignificant -0.019581 5.1850e-01 insignificant 1.00000000 insignificant 0.0316099 0.0381766 -0.0078113 21 0.1180158 0.06420749 0.0538083 0.9976314 4.0367e-02 weaklyHypometh 1.0000 1.000000 insignificant 0.9999459 0.0214659 weaklyHypometh 1 1 insignificant 0.0013515 0.9011865 insignificant 1.00000 insignificant 0.0714286 0.0381839 0.02458555 21 0.1164665 0.06667701 0.0497894 0.9374288 2.4866e-01 insignificant 1.00000 1.0000e+00 insignificant 0.99813 2.3847e-01 insignificant 1 1.00000000 insignificant 0.0209328 4.7709e-01 insignificant 1.0000000 insignificant chr1 120674531 120675531 2862 FAM72B ENSG00000188610 0.8129003 459 18 0.720549 423 17 0.793125 182 17 0.82348811 275 14 0.795523 144 16 0.820810 466 18 0.699988 155 16 0.804224 300 16 0.692512 184 15 0.683674 185 14 0.7643158 552 18 0.5792045 108 10 0.814399 353 16 0.8095238 23 2 0.786403 263 18 0.7751984 97 9 0.7771000 130 8 0.8411097 312 16 0.8115478 380 18 0.833949 380 18 0.785185 82 6 0.8052036 100 9 0.812767 317 18 0.736726 124 12 0.8238095 65 7 0.7150376 526 18 0.864225 137 12 0.757812 56 2 0.760163 280 14 0.7948161 481 17 0.7674840 518 18 0.8355541 574 18 0.698065 342 17 0.7141013 330 18 0.77664 374 18 0.735375 122 8 0.7307167 120 10 0.7234599 607 18 0.8070243 341 15 0.8360449 494 18 0.835694 335 18 0.875818 413 16 0.834736 411 18 0.8227190 0.760498 0.811677 0.8326045 0.847648 0.813314 0.7682924 0.820607 0.759594 0.7615435 0.785795 0.6469292 0.794071 0.8265128 0.817395 0.7921601 0.811822 0.8788272 0.8356618 0.8399987 0.8536103 0.8331265 0.8044067 0.7390389 0.8193962 0.8323789 0.8237046 0.7890998 0.755753 0.8007440 0.8026730 0.8256013 0.6836323 0.6932024 0.747826 0.776361 0.7078141 0.751991 0.8331649 0.8387841 0.847700 0.8643700 0.858406 4 0.8095327 0.8380368 -0.00300228 18 0.772395 0.786408 -0.01401349 0.677622 1.3508e-01 insignificant 1 1.0000000 insignificant 0.86446 3.4186e-01 insignificant 1 1.0000000 insignificant -0.01625484 0.4042106 insignificant 1 insignificant 0.8099683 0.7852243 0.0583795 18 0.788473 0.7449672 0.04350562 5.1051e-07 0.996039 weaklyHypermeth 2.6869e-05 1 weaklyHypermeth 5.9824e-04 0.9972548 weaklyHypermeth 3.1486e-02 1 weaklyHypermeth 0.0422517 3.0408e-02 weaklyHypermeth 1.0000e+00 insignificant 0.8100037 0.8124373 -0.04503691 18 0.799606 0.84354951 -0.0439437 0.99974255 5.4981e-04 weaklyHypometh 1.00000 0.084885 weaklyHypometh 0.999954 5.9762e-04 weaklyHypometh 1 0.100892 insignificant -0.0658862 0.00197123 weaklyHypometh 0.246404 insignificant 0.8382534 0.7852243 0.06321304 18 0.797106 0.7449672 0.052139 4.9937e-07 0.999602 weaklyHypermeth 3.3291e-05 1 weaklyHypermeth 9.3807e-04 0.999960 weaklyHypermeth 4.4670e-02 1 weaklyHypermeth 0.058506 2.9100e-03 weaklyHypermeth 0.15390763 insignificant 0.8384025 0.8124373 -0.0375582 18 0.8077845 0.84354951 -0.0357651 0.9998435 1.6767e-03 weaklyHypometh 1.0000 0.457331 insignificant 0.9999930 0.0214019 weaklyHypometh 1 1 insignificant -0.0496313 0.0103355 weaklyHypometh 1.00000 insignificant 0.7852243 0.8123432 -0.09899492 18 0.7449672 0.83485782 -0.0898906 1.0000000 1.1658e-07 weaklyHypometh 1.00000 1.0598e-05 weaklyHypometh 1.00000 1.0747e-06 weaklyHypometh 1 0.00053737 weaklyHypometh -0.1081378 6.7380e-05 weaklyHypometh 0.0084225 weaklyHypometh chr1 142674854 142675854 2874 SRGAP2P2 ENSG00000196369 0.7734778 217 5 0.639957 66 5 0.645765 85 5 0.85486772 126 5 0.672792 54 5 0.757935 108 5 0.658387 86 5 0.753846 38 2 0.813492 48 4 0.854898 85 5 0.7646571 126 5 0.7203175 55 5 0.709744 54 5 NA 0 0 0.715844 64 5 0.7708333 39 5 0.5503463 157 5 0.7255921 80 5 0.7509524 55 5 0.769276 131 5 0.786869 41 5 0.7122751 81 5 0.748527 160 5 0.891919 40 3 0.8885714 52 5 0.7562526 102 5 0.893801 113 3 0.785714 19 2 0.684289 57 5 0.8753551 86 5 0.7910434 86 5 0.7164369 158 5 0.610000 77 4 0.7124242 35 3 0.78000 42 4 0.830952 51 4 0.7398148 62 5 0.7680423 87 5 0.8741899 229 5 0.8006140 199 5 0.817589 121 5 0.788891 174 5 0.863235 142 5 0.7885321 0.597961 0.674813 0.8647392 0.631123 0.742097 0.6034771 0.768267 0.792845 0.8201919 0.722748 0.6797351 0.722653 NA 0.749888 0.7396617 0.502918 0.7321378 0.7319549 0.7575613 0.7529809 0.6652186 0.7837751 0.8849396 0.8856069 0.7623866 0.8709581 0.8259278 0.694693 0.8752294 0.8126945 0.7008805 0.6613339 0.7275120 0.803759 0.808897 0.7317043 0.805641 0.8842046 0.8214997 0.828610 0.8067787 0.890401 3 0.7329749 0.7547739 -0.02999662 5 0.773297 0.761945 0.01135214 0.251332 2.2855e-01 insignificant 1 1.0000000 insignificant 0.90511 6.1895e-03 weaklyHypometh 1 1.0000000 insignificant -0.06251868 0.0351013 lowCoverage 1 lowCoverage 0.7329749 0.7570621 -0.0389669 5 0.773297 0.7742894 -0.00099202 2.8594e-02 0.114644 inconclusive 4.4679e-01 1 insignificant 1.3104e-01 0.0868329 insignificant 1.0000e+00 1 insignificant -0.0084698 8.1598e-01 lowCoverage 1.0000e+00 lowCoverage 0.7321750 0.8173410 -0.10084095 5 0.727957 0.83125636 -0.1032995 0.99263049 5.9419e-04 weaklyHypometh 1.00000 0.084885 weaklyHypometh 0.991282 6.0083e-04 weaklyHypometh 1 0.100892 insignificant -0.0971680 0.00140324 lowCoverage 0.200463 lowCoverage 0.7547739 0.7570621 -0.00210030 5 0.761945 0.7742894 -0.012344 1.6479e-01 0.429839 insignificant 1.0000e+00 1 insignificant 2.8551e-02 0.579831 inconclusive 5.1911e-01 1 insignificant 0.054049 1.8212e-01 lowCoverage 1.00000000 lowCoverage 0.7545455 0.8173410 -0.0863766 5 0.7543343 0.83125636 -0.0769221 0.9699407 3.0081e-03 weaklyHypometh 1.0000 0.501342 insignificant 0.6679800 0.0827641 insignificant 1 1 insignificant -0.0346493 0.2316701 lowCoverage 1.00000 lowCoverage 0.7563739 0.8173410 -0.09182794 5 0.7291473 0.83125636 -0.1021091 0.9968622 5.7992e-03 weaklyHypometh 1.00000 1.4144e-01 insignificant 0.98820 2.2678e-02 weaklyHypometh 1 0.50396167 insignificant -0.0886981 3.6762e-02 lowCoverage 0.9674089 lowCoverage chr1 142710454 142711454 2882 SRGAP2P2 ENSG00000196369 0.8617827 498 15 0.766764 104 11 0.638587 124 8 0.88886222 383 15 0.819444 74 8 0.842211 334 15 0.743576 75 6 0.872152 110 8 0.795018 90 9 0.960705 90 9 0.9083033 266 11 0.5773737 62 7 0.935565 124 10 NA 0 0 0.865493 122 9 0.9261364 45 5 0.7916667 38 3 0.8932052 436 15 0.8831342 169 14 0.835583 344 15 0.915775 70 4 0.7963388 138 11 0.869051 256 15 0.950000 46 4 0.9282051 100 10 0.8528990 219 12 0.826848 109 8 0.987013 37 4 0.894048 91 6 0.8566315 209 14 0.8651924 219 14 0.8252202 484 15 0.775317 122 9 0.7450792 189 14 0.76841 340 15 0.792730 55 2 0.8408163 60 5 0.8367145 284 13 0.8787243 336 15 0.9148949 412 16 0.876326 404 15 0.898113 316 15 0.896259 463 15 0.8524762 0.820614 0.798655 0.8968277 0.940404 0.864602 0.8403704 0.868669 0.862930 0.9254160 0.911064 0.8514784 0.912872 NA 0.913488 0.9440510 0.911897 0.9285908 0.9215939 0.8716710 0.8958219 0.8545279 0.9156180 0.9380873 0.9681818 0.8906626 0.7614102 0.9689865 0.918586 0.8630115 0.8884390 0.8478301 0.7446360 0.7233942 0.817493 0.843783 0.8659548 0.848507 0.8871073 0.9360665 0.891674 0.9097580 0.916650 3 0.8732798 0.8697864 -0.00192102 14 0.858722 0.857852 0.00087002 0.677806 6.6945e-01 insignificant 1 1.0000000 insignificant 0.99615 1.5908e-01 insignificant 1 1.0000000 insignificant -0.04873001 0.0891493 insignificant 1 insignificant 0.8732798 0.7883699 0.0802429 13 0.858722 0.7830193 0.07570251 2.1549e-09 0.999978 weaklyHypermeth 1.5392e-07 1 weaklyHypermeth 3.4463e-03 0.9156191 weaklyHypermeth 1.2764e-01 1 insignificant 0.0386949 1.7263e-01 insignificant 1.0000e+00 insignificant 0.8732798 0.9046632 -0.02750624 14 0.858722 0.89480500 -0.0360832 0.99641517 4.3443e-02 weaklyHypometh 1.00000 1.000000 insignificant 0.977870 1.4624e-01 insignificant 1 1.000000 insignificant -0.0609917 0.01720534 weaklyHypometh 1.000000 insignificant 0.8702484 0.7885714 0.08174332 13 0.866213 0.7957829 0.070431 3.6037e-06 0.999998 weaklyHypermeth 2.1198e-04 1 weaklyHypermeth 2.5436e-03 0.999893 weaklyHypermeth 9.4206e-02 1 weaklyHypermeth 0.087425 1.6738e-03 weaklyHypermeth 0.09845799 weaklyHypermeth 0.8691020 0.9047126 -0.0229414 14 0.8426840 0.90099294 -0.0583089 0.9948481 2.2941e-02 weaklyHypometh 1.0000 1.000000 insignificant 0.5962359 0.8142896 insignificant 1 1 insignificant -0.0122617 0.4987633 insignificant 1.00000 insignificant 0.7883699 0.9046632 -0.10231628 13 0.7830193 0.89480500 -0.1117857 1.0000000 4.7251e-09 weaklyHypometh 1.00000 5.9064e-07 weaklyHypometh 0.99982 1.1646e-03 weaklyHypometh 1 0.06470086 weaklyHypometh -0.0996866 7.1991e-04 weaklyHypometh 0.0599923 weaklyHypometh chr1 143202652 143203652 2897 ENSG00000206828 0.0034191 300 5 0.012821 106 8 0.000000 5 0 0.00606061 175 5 0.027778 200 5 0.000000 199 5 0.000000 239 7 0.000000 94 5 0.014286 118 8 0.000000 225 5 0.0000000 151 8 0.0000000 227 5 0.100000 127 5 0.0384615 99 5 0.045635 113 5 0.0000000 410 9 NA 0 0 0.0054203 775 9 0.0000000 183 5 0.000000 427 5 0.250000 4 0 0.0000000 92 5 0.082993 114 7 0.000000 23 0 0.0027778 451 8 0.0000000 162 5 0.000000 26 3 0.000000 9 0 0.000000 25 3 0.0000000 318 8 0.0000000 144 8 0.0028571 183 5 0.000000 56 7 0.0000000 100 5 0.00000 5 0 NA 0 0 0.0072162 171 5 0.0037879 169 5 0.0000000 251 5 0.0041667 457 8 0.000000 27 3 0.000000 411 5 0.000000 157 5 0.0056660 0.000000 0.000000 0.0033670 0.000000 0.000000 0.0000000 0.000000 0.000000 0.0000000 0.000000 0.0000000 0.000000 0.0000000 0.013228 0.0000000 NA 0.0081472 0.0000000 0.0000000 0.0015448 0.0000000 0.0465608 0.0000000 0.0012346 0.0000000 0.0000000 0.0032043 0.000000 0.0000000 0.0000000 0.0095238 0.0000000 0.0000000 NA NA 0.0211167 0.010101 0.0000000 0.0018519 0.000000 0.0000000 0.000000 0 0.0035945 0.0070968 -0.00323986 5 0.016694 0.021596 -0.00490178 0.973912 1.8416e-02 weaklyHypometh 1 1.0000000 insignificant 0.99912 7.5701e-01 insignificant 1 1.0000000 insignificant -0.01485688 0.5127976 lowCoverage 1 lowCoverage 0.0035945 0.0079840 -0.0038106 5 0.016694 0.0027028 0.01399164 8.3676e-01 0.027536 weaklyHypometh 1.0000e+00 1 insignificant 9.9108e-01 0.7616000 insignificant 1.0000e+00 1 insignificant 0.0111613 7.5370e-02 lowCoverage 1.0000e+00 lowCoverage 0.0030250 0.0023024 0.00070841 5 0.012022 0.00148221 0.0105401 0.48871820 5.5996e-01 insignificant 1.00000 1.000000 insignificant 0.647687 9.0439e-01 insignificant 1 1.000000 insignificant 0.0125288 0.04493796 weaklyHypermeth 1.000000 insignificant 0.0070968 0.0079840 -0.00055681 5 0.021596 0.0027028 0.018893 9.5603e-01 0.919799 insignificant 1.0000e+00 1 insignificant 9.9899e-01 0.996373 insignificant 1.0000e+00 1 insignificant 0.026018 2.4808e-01 lowCoverage 1.00000000 lowCoverage 0.0059133 0.0023024 0.0036773 5 0.0074781 0.00148221 0.0059959 0.6085378 8.3277e-01 insignificant 1.0000 1.000000 insignificant 0.6746282 0.9772714 insignificant 1 1 insignificant 0.0273857 0.2250619 lowCoverage 1.00000 lowCoverage 0.0084388 0.0023024 0.00613732 5 0.0054056 0.00148221 0.0039233 0.4983618 1.0000e+00 insignificant 1.00000 1.0000e+00 insignificant 0.89946 1.0000e+00 insignificant 1 1.00000000 insignificant 0.0013675 4.4362e-01 lowCoverage 1.0000000 lowCoverage chr1 143284652 143285652 2905 ENSG00000201699 0.7502727 457 13 0.777979 1089 13 0.759350 271 12 0.89288445 418 12 0.662361 208 11 0.807717 755 13 0.728322 202 11 0.806080 676 13 0.744251 203 12 0.761046 205 11 0.7541228 653 13 0.7341270 147 10 0.843972 474 12 0.8291465 216 7 0.781120 389 11 0.8360537 91 8 0.6461703 384 10 0.9139605 457 12 0.7765566 238 13 0.745015 525 13 0.796843 206 14 0.8031177 131 11 0.735168 235 11 0.700767 186 11 0.8834987 87 11 0.8249016 824 13 0.793037 396 14 0.810511 67 5 0.846242 242 8 0.8354092 627 13 0.7989024 573 13 0.8524889 752 12 0.718780 521 13 0.7219601 255 11 0.65192 570 13 0.728421 100 7 0.7845600 241 13 0.7305303 618 13 0.8218267 313 12 0.7855820 451 12 0.874681 438 13 0.824264 349 10 0.925839 331 13 0.9012659 0.815073 0.809606 0.8948196 0.807244 0.841621 0.7311976 0.835128 0.805377 0.8241569 0.852868 0.7778803 0.866655 0.8530109 0.849503 0.8703153 0.802434 0.8929918 0.8460579 0.8595568 0.9073386 0.8925759 0.8385577 0.7945522 0.8826416 0.8654787 0.8795935 0.8778171 0.861251 0.8945405 0.8336229 0.8628617 0.7574050 0.7407968 0.717625 0.797742 0.8159493 0.746046 0.8713006 0.8697487 0.900843 0.8920697 0.943365 9 0.8611387 0.8800277 -0.01640569 13 0.774824 0.809057 -0.03423215 0.995465 1.8271e-01 insignificant 1 1.0000000 insignificant 0.99269 3.0622e-02 weaklyHypometh 1 1.0000000 insignificant -0.02921524 0.1680117 insignificant 1 insignificant 0.8610524 0.7822126 0.0811327 13 0.761579 0.7285400 0.03303872 3.3183e-11 0.958944 weaklyHypermeth 2.7652e-09 1 weaklyHypermeth 5.7952e-04 0.8645178 weaklyHypermeth 3.1486e-02 1 weaklyHypermeth 0.0548297 3.1173e-02 weaklyHypermeth 1.0000e+00 insignificant 0.8610524 0.8602550 -0.05022439 12 0.761579 0.82510603 -0.0635273 0.99985079 5.2477e-05 weaklyHypometh 1.00000 0.051954 weaklyHypometh 0.999990 1.0778e-05 weaklyHypometh 1 0.010778 weaklyHypometh -0.0689133 0.04509887 weaklyHypometh 1.000000 insignificant 0.8799167 0.7822126 0.09764241 13 0.797825 0.7285400 0.069285 2.6432e-10 0.978392 weaklyHypermeth 2.3456e-08 1 weaklyHypermeth 8.1092e-05 0.989909 weaklyHypermeth 5.7923e-03 1 weaklyHypermeth 0.084045 2.9242e-03 weaklyHypermeth 0.15390763 insignificant 0.8799167 0.8602550 -0.0289383 12 0.7978245 0.82510603 -0.0272815 0.9939638 1.6242e-02 weaklyHypometh 1.0000 1.000000 insignificant 0.9948951 0.0436425 weaklyHypometh 1 1 insignificant -0.0396981 0.2041268 insignificant 1.00000 insignificant 0.7822126 0.8602550 -0.13544442 12 0.7285400 0.82510603 -0.0965660 0.9998945 2.1722e-10 weaklyHypometh 1.00000 3.6203e-08 weaklyHypometh 1.00000 1.4526e-05 weaklyHypometh 1 0.00242100 weaklyHypometh -0.1237430 3.7370e-03 weaklyHypometh 0.2335635 insignificant chr1 143750663 143751663 2921 PDE4DIP ENSG00000178104 0.0037037 302 9 0.011199 1230 9 0.011857 754 9 0.00076394 356 8 0.000000 376 6 0.114828 496 9 0.146657 660 6 0.161074 561 6 0.050000 394 6 0.013099 162 6 0.0075333 641 6 0.0034483 225 8 0.023016 101 6 0.0016234 160 6 0.000000 235 6 0.0064103 192 6 NA 0 0 0.0025253 174 9 0.0089237 323 6 0.003367 366 9 0.015559 209 6 0.0000000 29 1 0.020677 474 9 0.000000 421 6 0.1268018 1568 6 0.0011206 988 9 0.000000 323 6 0.062500 154 6 0.000000 207 6 0.0060326 1254 9 0.0028448 1134 9 0.0123471 373 9 0.010440 684 9 0.0048077 366 6 0.10000 465 9 0.000000 580 6 0.1120294 713 6 0.0000000 912 9 0.0019863 611 8 0.0016835 490 9 0.000000 266 8 0.000000 325 6 0.000000 600 9 0.0050748 0.016303 0.012159 0.0021682 0.000000 0.013095 0.0047006 0.016548 0.000000 0.0341331 0.010432 0.0052498 0.020566 0.0046074 0.000000 0.0058555 NA 0.0078186 0.0093138 0.0078186 0.0275399 0.0000000 0.0032051 0.0000000 0.0032765 0.0020001 0.0000000 0.0000000 0.000000 0.0092938 0.0040504 0.0128812 0.0053696 0.0051313 0.000000 0.000000 0.0012052 0.000000 0.0031099 0.0023067 0.000000 0.0000000 0.000000 6 0.0096004 0.0054668 0.00389538 9 0.044171 0.028004 0.01616708 0.518977 9.9974e-01 insignificant 1 1.0000000 insignificant 0.88052 9.9736e-01 insignificant 1 1.0000000 insignificant 0.00934469 0.5648058 insignificant 1 insignificant 0.0092629 0.0029570 0.0059637 9 0.041133 0.1564269 -0.11529356 4.8597e-02 0.793294 weaklyHypermeth 6.8446e-01 1 insignificant 2.0080e-01 0.8069528 insignificant 1.0000e+00 1 insignificant -0.0078780 7.5721e-01 insignificant 1.0000e+00 insignificant 0.0090279 0.0013089 0.00771937 9 0.008489 0.00096507 0.0075239 0.00065463 9.9990e-01 weaklyHypermeth 0.10910 1.000000 insignificant 0.015080 9.9994e-01 weaklyHypermeth 1 1.000000 insignificant 0.0292676 0.02280424 weaklyHypermeth 1.000000 insignificant 0.0053551 0.0029570 0.00211459 9 0.019596 0.1564269 -0.136831 3.9550e-01 0.982652 insignificant 1.0000e+00 1 insignificant 5.5477e-01 0.883693 insignificant 1.0000e+00 1 insignificant -0.017223 4.9876e-01 insignificant 1.00000000 insignificant 0.0052275 0.0013089 0.0037073 9 0.0060832 0.00096507 0.0051182 0.0499553 9.9992e-01 weaklyHypermeth 1.0000 1.000000 insignificant 0.0556444 0.9999941 insignificant 1 1 insignificant 0.0199229 0.0954200 insignificant 1.00000 insignificant 0.0024220 0.0013089 0.00071472 9 0.0037278 0.00096507 0.0027627 0.4341692 9.9262e-01 insignificant 1.00000 1.0000e+00 insignificant 0.70154 9.9752e-01 insignificant 1 1.00000000 insignificant 0.0371456 1.4702e-01 insignificant 1.0000000 insignificant chr1 144469263 144470263 2950 PDZK1 ENSG00000174827 0.7639021 204 6 0.727384 105 6 0.690000 30 3 0.75530648 214 6 0.616667 53 3 0.828896 140 6 0.600000 73 6 0.743191 76 5 0.665556 26 2 0.684524 21 1 0.6965062 169 6 0.6944444 21 1 0.645671 48 5 0.5158371 55 5 0.549841 38 5 0.5000000 20 3 0.6666667 56 2 0.5270010 180 7 0.6842593 54 5 0.764646 77 5 0.768254 25 2 0.9100000 17 2 0.670910 142 6 0.538542 40 5 0.7258807 94 6 0.7144621 107 6 0.608796 35 3 0.683333 19 2 0.671887 84 5 0.6858719 118 6 0.6807209 92 6 0.6410256 87 6 0.613716 94 6 0.6021123 84 5 0.58922 112 6 0.628472 34 2 0.6436386 87 6 0.6290266 98 6 0.6747303 222 6 0.7119500 237 6 0.741685 230 6 0.712297 136 5 0.703323 241 6 0.7647693 0.760927 0.757813 0.7693126 0.640625 0.832659 0.5921875 0.745570 0.690104 0.6729911 0.711061 0.7135417 0.691930 0.6894796 0.626438 0.6750565 0.753181 0.6246410 0.6602431 0.7694129 0.7946429 0.8750000 0.6746509 0.6419271 0.7235687 0.6885582 0.5846354 0.7031250 0.658215 0.6736568 0.6865629 0.6656250 0.5957914 0.5794260 0.579607 0.661458 0.6745223 0.605337 0.6805105 0.7149703 0.748715 0.7079572 0.719061 1 0.7094635 0.6949942 0.03806313 6 0.603991 0.575881 0.02811081 0.029340 9.9659e-01 weaklyHypermeth 1 1.0000000 insignificant 0.31515 9.5139e-01 insignificant 1 1.0000000 insignificant -0.02562532 0.4449192 lowCoverage 1 lowCoverage 0.7133333 0.6601179 0.0981480 6 0.704657 0.6168017 0.08785496 8.2418e-06 0.996200 weaklyHypermeth 3.5662e-04 1 weaklyHypermeth 1.0149e-03 0.9996175 weaklyHypermeth 4.4125e-02 1 weaklyHypermeth 0.0483181 3.7284e-02 lowCoverage 1.0000e+00 lowCoverage 0.7133333 0.6876173 0.00034516 6 0.704657 0.70654665 -0.0018900 0.66573771 4.3398e-01 insignificant 1.00000 1.000000 insignificant 0.802672 5.5478e-01 insignificant 1 1.000000 insignificant -0.0427822 0.07536347 lowCoverage 1.000000 lowCoverage 0.6958042 0.6601179 0.06176068 6 0.671861 0.6168017 0.055059 2.0494e-02 0.970194 weaklyHypermeth 3.1529e-01 1 insignificant 1.4066e-02 0.993166 weaklyHypermeth 3.1257e-01 1 insignificant 0.073943 1.7684e-02 lowCoverage 0.58945977 lowCoverage 0.6958042 0.6876173 -0.0383014 6 0.6718607 0.70654665 -0.0346859 0.9199006 3.7904e-02 weaklyHypometh 1.0000 1.000000 insignificant 0.8404150 0.1192796 insignificant 1 1 insignificant -0.0171568 0.5514280 lowCoverage 1.00000 lowCoverage 0.6601179 0.6876173 -0.09748700 6 0.6168017 0.70654665 -0.0897449 0.9993876 1.1613e-06 weaklyHypometh 1.00000 8.2950e-05 weaklyHypometh 0.99666 3.9203e-04 weaklyHypometh 1 0.02661355 weaklyHypometh -0.0911003 1.5404e-04 weaklyHypometh 0.0171156 weaklyHypometh chr1 144640658 144641658 2954 GPR89C ENSG00000196644 0.6514149 239 6 0.718519 122 5 0.477976 41 5 0.79730391 221 6 0.627525 48 5 0.741648 139 6 0.675770 82 5 0.564352 69 5 0.627778 35 4 0.483333 22 1 0.7000595 156 6 0.6000000 14 1 0.789950 55 5 0.6650000 37 5 0.781624 33 3 0.6666667 20 1 0.7454545 60 1 0.6153030 184 5 0.7902167 55 4 0.759339 96 5 0.642857 31 3 1.0000000 14 0 0.679597 165 6 0.616667 28 3 0.7122059 104 5 0.6729925 96 6 0.684753 46 5 0.972222 23 2 0.713913 86 5 0.6712324 136 6 0.7035267 103 6 0.6854257 101 5 0.646785 108 6 0.5887218 53 4 0.64870 141 5 0.533333 19 2 0.5509291 81 5 0.6516144 95 6 0.7587443 227 6 0.7921576 227 6 0.668855 223 6 0.700083 158 5 0.713124 233 6 0.7016368 0.707372 0.628467 0.8160349 0.747086 0.760634 0.7248592 0.701694 0.704762 0.5641026 0.745881 0.5772053 0.853265 0.7843407 0.799521 0.6657509 0.794488 0.7436647 0.7655728 0.7934034 0.7500000 1.0000000 0.7243263 0.7280220 0.7560924 0.7111629 0.6813338 0.9725275 0.785526 0.7510526 0.7464986 0.7574806 0.7034713 0.6217467 0.692603 0.683240 0.6240550 0.668670 0.7688826 0.7609773 0.732971 0.7233680 0.748410 1 0.7158629 0.7446352 -0.02179224 6 0.691116 0.699909 -0.00879264 0.286811 5.9161e-02 insignificant 1 1.0000000 insignificant 0.42470 7.4677e-03 weaklyHypometh 1 1.0000000 insignificant -0.05565427 0.1954208 lowCoverage 1 lowCoverage 0.7158629 0.6941650 0.0503706 6 0.691116 0.6325824 0.05853354 1.2256e-02 0.977848 weaklyHypermeth 2.1351e-01 1 insignificant 4.6987e-03 0.9856371 weaklyHypermeth 1.4239e-01 1 insignificant 0.0706143 3.4517e-02 lowCoverage 1.0000e+00 lowCoverage 0.7159420 0.6956929 -0.01095870 6 0.705837 0.77655190 -0.0707150 0.90333696 5.3510e-01 insignificant 1.00000 1.000000 insignificant 0.939599 3.7705e-01 insignificant 1 1.000000 insignificant -0.0526312 0.10924237 lowCoverage 1.000000 lowCoverage 0.7446352 0.6941650 0.07079015 6 0.699909 0.6325824 0.067326 4.4925e-03 0.999013 weaklyHypermeth 8.9849e-02 1 weaklyHypermeth 4.8678e-04 0.999995 weaklyHypermeth 2.5620e-02 1 weaklyHypermeth 0.126269 7.9672e-03 lowCoverage 0.33196767 lowCoverage 0.7446352 0.6948357 0.0106899 6 0.6999086 0.70206919 -0.0021606 0.2989956 3.6212e-01 insignificant 1.0000 1.000000 insignificant 0.0722035 0.5743275 insignificant 1 1 insignificant 0.0030231 0.9431724 lowCoverage 1.00000 lowCoverage 0.6941650 0.6948357 -0.05913985 6 0.6325824 0.70206919 -0.0694868 0.9959462 6.2239e-04 weaklyHypometh 1.00000 2.3052e-02 weaklyHypometh 0.99916 1.0103e-03 weaklyHypometh 1 0.05943132 weaklyHypometh -0.1232455 3.1932e-03 lowCoverage 0.2253663 lowCoverage chr1 145937658 145938658 2967 GPR89B ENSG00000188092 0.6592560 233 6 0.449073 109 6 0.698214 45 4 0.71214386 187 6 0.723214 64 5 0.725180 129 6 0.681349 58 6 0.774258 78 5 0.775132 41 5 0.680000 26 4 0.7882532 153 6 0.5277778 18 2 0.673737 49 5 0.7237790 50 5 0.767424 42 4 0.6000000 8 0 0.3212121 60 1 0.7227685 200 5 0.7177778 57 3 0.766931 81 5 0.611111 28 4 0.8333333 4 0 0.598772 127 6 0.406439 45 4 0.7283897 99 5 0.8136095 125 6 0.548168 65 4 0.651515 30 3 0.573382 73 5 0.7675149 98 5 0.7486402 81 6 0.7144814 87 6 0.615287 117 6 0.6416667 80 5 0.64732 138 5 0.437374 25 2 0.6594001 66 5 0.6378708 102 5 0.7086004 207 6 0.6723784 236 6 0.723700 187 6 0.630843 169 5 0.651137 185 6 0.7215840 0.676448 0.755714 0.7739889 0.728571 0.781234 0.7356429 0.805421 0.781429 0.7660000 0.755889 0.6025524 0.812879 0.7488611 0.831288 0.7175930 0.599522 0.7053520 0.7380000 0.7778571 0.7766667 0.6723074 0.7164223 0.6874432 0.7634353 0.8273479 0.7101282 0.7190909 0.699522 0.8009624 0.7829953 0.7473351 0.6521207 0.6450714 0.649946 0.478424 0.7142857 0.726000 0.7672492 0.7104812 0.762075 0.7475922 0.732050 2 0.7164887 0.7351916 -0.00628532 6 0.575890 0.470767 0.10512328 0.850935 7.4887e-01 insignificant 1 1.0000000 insignificant 0.63427 9.7508e-01 insignificant 1 1.0000000 insignificant 0.00809431 0.8578446 lowCoverage 1 lowCoverage 0.7174301 0.7096774 0.0575342 5 0.697168 0.6267173 0.07045083 3.4450e-03 0.981995 weaklyHypermeth 7.3298e-02 1 weaklyHypermeth 4.3704e-03 0.9989502 weaklyHypermeth 1.4098e-01 1 insignificant 0.0678871 1.4427e-01 lowCoverage 1.0000e+00 lowCoverage 0.7168246 0.6595528 0.01810476 6 0.618301 0.70059406 -0.0822932 0.38905669 4.8663e-01 insignificant 1.00000 1.000000 insignificant 0.694580 8.6347e-01 insignificant 1 1.000000 insignificant -0.0029576 0.92645586 lowCoverage 1.000000 lowCoverage 0.7369034 0.7102273 0.06626668 5 0.605271 0.6800434 -0.074772 5.8562e-03 0.990574 weaklyHypermeth 1.1262e-01 1 insignificant 1.3228e-02 0.857009 weaklyHypermeth 3.1177e-01 1 insignificant 0.059793 2.4881e-01 lowCoverage 1.00000000 lowCoverage 0.7351916 0.6592065 0.0223745 6 0.4707666 0.66732673 -0.1965602 0.4193680 8.2526e-01 insignificant 1.0000 1.000000 insignificant 0.8484695 0.2547317 insignificant 1 1 insignificant -0.0110519 0.7857821 lowCoverage 1.00000 lowCoverage 0.7096774 0.6591837 -0.04260780 5 0.6267173 0.66765677 -0.0409395 0.7429821 7.9443e-03 weaklyHypometh 1.00000 1.6949e-01 insignificant 0.96389 2.6164e-03 weaklyHypometh 1 0.11375593 insignificant -0.0708447 1.0637e-01 lowCoverage 1.0000000 lowCoverage chr1 149253101 149254101 3025 PRUNE ENSG00000143363 0.864241 148 4 0.7597002 164 8 0.765923 79 8 0.8353885 213 8 0.7696429 55 6 0.793280 254 8 0.612698 45 4 0.807195 152 8 0.719895 76 7 0.882143 57 3 0.8434966 263 8 0.812500 17 0 0.821023 96 8 0.791056 66 7 0.7435897 62 6 0.593333 24 4 0.500000 4 0 0.756077 242 5 0.655000 171 8 0.698812 189 8 0.723333 41 5 1.000000 35 2 0.806521 100 8 0.814583 60 7 0.957672 80 4 0.869400 158 8 0.9198308 79 5 0.6785714 31 2 0.801842 132 5 0.722626 178 8 0.836051 141 8 0.837956 237 8 0.818004 153 8 0.7678571 94 6 0.717949 103 6 0.708333 19 2 0.637619 65 7 0.711462 189 8 0.882858 112 6 0.831505 141 7 0.8897666 176 6 0.8453247 208 3 0.8087284 128 7 0.8932476 0.8031234 0.780236 0.899325 0.913594 0.9176197 0.707220 0.8954245 0.883024 0.876728 0.8766191 0.887097 0.907625 0.860378 0.869038 0.757382 0.5758289 0.8312137 0.8711307 0.8648621 0.889606 0.9709165 0.874166 0.831900 0.947022 0.891834 0.9071350 0.820276 0.921619 0.8390898 0.902597 0.8640492 0.838518 0.86405530 0.83010383 0.727599 0.7815156 0.9161479 0.9490020 0.865302 0.920163 0.887910 0.8902875 1 0.852756 0.872642 -0.01037316 8 0.804434 0.729853 0.0745807 0.9774297 6.0120e-01 insignificant 1 1.0000e+00 insignificant 0.997402 6.0230e-02 insignificant 1 1.0000000 insignificant -0.07944917 0.034478 weaklyHypometh 1 insignificant 0.8525074 0.813804 0.01826173 8 0.745764 0.692841 0.05292275 2.7768e-01 2.6546e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.1510e-01 2.9984e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02437893 4.7448e-01 insignificant 1.0000e+00 insignificant 0.8525074 0.907190 -0.0332418 6 0.745764 0.831408 -0.0856443 9.8752e-01 9.4610e-02 insignificant 1.0000e+00 1.00000000 insignificant 9.9230e-01 5.9807e-02 insignificant 1.00000000 1.0000000 insignificant -0.1003868 0.00126873 weaklyHypometh 0.133149 insignificant 0.873717 0.813804 0.0328857 8 0.798809 0.692841 0.10596785 1.0292e-01 7.3914e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.1030e-02 8.2839e-01 insignificant 7.7319e-01 1.0000000 insignificant 0.10382809 1.4174e-02 weaklyHypermeth 3.8308e-01 insignificant 0.873717 0.907190 -0.01975886 6 0.798809 0.831408 -0.0325992 9.4041e-01 3.4925e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.6430249 7.7444e-01 insignificant 1.00000 1.0000000 insignificant -0.02093759 0.52026082 insignificant 1.00000 insignificant 0.813804 0.907190 -0.0585940 6 0.692841 0.831408 -0.1385670 4.6920e-01 3.9341e-01 insignificant 1.00000000 1.0000e+00 insignificant 0.76540220 1.3055e-01 insignificant 1.00000 1.0000e+00 insignificant -0.12476569 2.6950e-03 weaklyHypometh 1.1718e-01 insignificant chr1 150427601 150428601 3060 RPTN ENSG00000215853 0.856800 897 32 0.8174398 735 38 0.777985 643 37 0.8762141 855 27 0.8948799 364 29 0.830121 1332 35 0.772712 268 23 0.851911 637 32 0.768824 308 25 0.734710 420 25 0.7120790 1089 35 0.490852 417 24 0.875389 603 25 0.937140 162 12 0.8727894 431 25 0.355716 209 19 0.839461 192 16 0.884078 1028 33 0.850389 697 32 0.864250 1046 31 0.795362 265 26 0.777867 377 25 0.799358 663 36 0.850466 278 16 0.908756 318 25 0.884314 864 35 0.7377001 638 27 0.7739492 102 5 0.937651 833 31 0.920100 1109 36 0.939870 1039 33 0.844275 1047 30 0.138660 985 38 0.2656808 821 30 0.179967 588 22 0.200037 214 22 0.240719 461 31 0.142003 1387 39 0.899086 686 32 0.857770 967 33 0.8633306 822 25 0.8691970 752 31 0.8722414 774 34 0.8821509 0.8055627 0.755845 0.895900 0.869505 0.8689312 0.784981 0.8525321 0.826909 0.777817 0.7507668 0.449168 0.868101 0.864027 0.870215 0.319723 0.7929876 0.9042169 0.8811128 0.8672734 0.746214 0.8048694 0.866835 0.848090 0.921671 0.916133 0.7922564 0.778292 0.917870 0.9180826 0.891896 0.9116178 0.193143 0.37208637 0.28317936 0.311292 0.1958235 0.2504729 0.8964240 0.926543 0.870122 0.939331 0.9183549 12 0.824842 0.900027 -0.06776585 34 0.766909 0.788893 -0.0219836 1.0000000 2.5746e-10 weaklyHypometh 1 2.5746e-07 weaklyHypometh 1.000000 7.9518e-06 weaklyHypometh 1 0.0079518 weaklyHypometh -0.05428518 0.156627 insignificant 1 insignificant 0.8249899 0.224417 0.59840915 34 0.766549 0.179378 0.58717170 2.2297e-207 1.0000e+00 hypermethylated 1.1149e-204 1.0000e+00 hypermethylated 2.2004e-60 1.0000e+00 hypermethylated 1.1002e-57 1.0000e+00 hypermethylated 0.59867604 1.0258e-13 hypermethylated 2.5645e-11 hypermethylated 0.8249472 0.893447 -0.0642377 29 0.791345 0.864739 -0.0733947 1.0000e+00 4.8915e-06 weaklyHypometh 1.0000e+00 0.00163052 weaklyHypometh 9.9998e-01 1.2148e-05 weaklyHypometh 1.00000000 0.0059142 weaklyHypometh -0.0791381 0.02265887 weaklyHypometh 0.796362 insignificant 0.900505 0.224517 0.6669877 34 0.806424 0.187350 0.61907365 5.2198e-244 1.0000e+00 hypermethylated 2.6099e-241 1.0000e+00 hypermethylated 2.2672e-58 1.0000e+00 hypermethylated 1.1336e-55 1.0000000 hypermethylated 0.65296122 5.7841e-12 hypermethylated 1.9569e-09 hypermethylated 0.900944 0.893447 0.00077072 29 0.824552 0.864739 -0.0401875 1.8349e-01 1.0180e-02 inconclusive 1.0000e+00 8.5950e-01 insignificant 0.4508787 6.0100e-02 insignificant 1.00000 1.0000000 insignificant -0.02485289 0.26843087 insignificant 1.00000 insignificant 0.224444 0.893670 -0.6585515 32 0.176923 0.885328 -0.7084057 1.0000e+00 1.5443e-142 hypomethylated 1.00000000 7.7216e-140 hypomethylated 1.00000000 6.8253e-38 hypomethylated 1.00000 3.4127e-35 hypomethylated -0.67781411 6.5511e-08 hypomethylated 6.5511e-05 hypomethylated chr1 151771601 151772601 3067 ENSG00000222058 0.216667 20 1 0.2415641 157 7 0.238639 193 6 0.1388889 17 0 0.1579940 84 6 0.547619 22 1 0.030217 111 5 0.089169 68 5 0.014706 51 3 0.050769 39 3 0.0638130 102 5 0.088973 90 3 0.081151 52 3 0.666667 3 0 0.0119048 74 3 0.125957 95 3 0.161558 74 3 0.208333 14 2 0.134667 75 5 0.203704 37 4 0.198980 29 3 0.000000 3 0 0.175700 59 4 0.129464 88 5 0.053571 23 3 0.163952 169 7 0.0952381 34 2 0.0000000 22 1 0.044444 32 3 0.120030 150 6 0.144183 125 7 0.236054 28 4 0.115385 108 7 0.2028139 43 3 0.251287 123 5 0.063158 59 3 0.237213 60 5 0.337807 80 5 0.200000 8 0 0.416667 26 1 0.2277778 19 3 0.2916667 12 0 0.3333333 31 3 0.0000000 0.0448179 0.126964 0.005791 0.039659 0.2983193 0.125867 0.1080354 0.055363 0.144796 0.0069204 0.150579 0.129167 0.946967 0.067227 0.222256 0.1167455 0.0000000 0.0572549 0.3137255 0.235294 0.0029412 0.103922 0.033613 0.117647 0.029085 0.0000000 0.000000 0.103922 0.0000000 0.100840 0.2787115 0.000000 0.16119175 0.00000000 0.118536 0.1462185 0.2470588 0.0036765 0.014706 0.156863 0.470588 0.3137255 0 0.166183 0.172142 0.03255237 5 0.178280 0.135387 0.0428928 0.0676419 9.9936e-01 insignificant 1 1.0000e+00 insignificant 0.231910 9.9916e-01 insignificant 1 1.0000000 insignificant 0.06017981 0.174164 lowCoverage 1 lowCoverage 0.1663004 0.249471 -0.04013295 4 0.203468 0.272059 -0.06859140 9.3780e-01 2.3725e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.4963e-01 5.1880e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.02762914 6.2199e-01 lowCoverage 1.0000e+00 lowCoverage 0.1660544 0.302083 -0.1192441 1 0.196820 0.305063 -0.1082430 9.8749e-01 3.8167e-03 lowCoverage 1.0000e+00 0.34697257 lowCoverage 9.4379e-01 2.1635e-01 lowCoverage 1.00000000 1.0000000 lowCoverage -0.1202409 0.04346563 lowCoverage 1.000000 lowCoverage 0.173565 0.249471 -0.0747119 6 0.161157 0.272059 -0.11090238 9.9811e-01 1.6307e-03 weaklyHypometh 1.0000e+00 3.2613e-01 insignificant 9.9594e-01 9.6655e-02 insignificant 1.0000e+00 1.0000000 insignificant -0.08780896 9.2295e-02 lowCoverage 1.0000e+00 lowCoverage 0.173854 0.302083 -0.15423396 1 0.163771 0.305063 -0.1412923 9.9324e-01 5.5552e-05 lowCoverage 1.0000e+00 1.8517e-02 lowCoverage 0.9933569 6.1437e-02 lowCoverage 1.00000 1.0000000 lowCoverage -0.18042076 0.00516711 lowCoverage 0.73816 lowCoverage 0.248936 0.302083 -0.0723238 1 0.263306 0.305063 -0.0417576 7.2020e-01 1.4423e-01 lowCoverage 1.00000000 1.0000e+00 lowCoverage 0.93212878 3.7970e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage -0.09261180 1.3188e-01 lowCoverage 1.0000e+00 lowCoverage chr1 151936801 151937801 3076 NPR1 ENSG00000169418 0.370219 691 12 0.1940719 438 13 0.300899 523 13 0.2781104 621 10 0.2331368 363 13 0.520169 773 13 0.444917 488 13 0.168468 478 13 0.217269 760 13 0.316707 632 13 0.3855445 598 13 0.322545 465 13 0.195815 636 13 0.366633 218 5 0.2105245 560 13 0.204891 474 13 0.151108 451 13 0.408345 713 11 0.144480 383 13 0.266843 659 12 0.248192 215 12 0.178523 348 10 0.354950 615 13 0.265893 282 13 0.372170 230 10 0.286295 630 13 0.2041536 401 13 0.2370449 218 12 0.226976 444 13 0.261878 743 13 0.136640 758 13 0.359911 775 13 0.183195 537 13 0.3586220 359 13 0.197694 250 6 0.340634 154 10 0.283221 213 12 0.346366 529 13 0.354219 703 11 0.488926 626 13 0.2634111 675 10 0.3900809 572 10 0.3167832 482 13 0.3207995 0.1876139 0.280491 0.275995 0.231071 0.4092439 0.388203 0.1784290 0.195116 0.240212 0.3325923 0.263011 0.164923 0.291894 0.197884 0.193171 0.1609896 0.3316151 0.1287599 0.2153290 0.290605 0.1734623 0.321604 0.262204 0.299688 0.224632 0.1658829 0.203534 0.256179 0.1968139 0.117178 0.2465566 0.189738 0.32195626 0.33824136 0.281498 0.2419844 0.2842371 0.3500255 0.428122 0.285193 0.324674 0.2936784 10 0.284328 0.236782 0.03850881 13 0.295344 0.218901 0.0764428 0.0034749 9.9998e-01 weaklyHypermeth 1 1.0000e+00 insignificant 0.144493 9.9350e-01 insignificant 1 1.0000000 insignificant 0.02398244 0.454191 insignificant 1 insignificant 0.2841169 0.273664 -0.00920241 13 0.278030 0.288306 -0.01027571 6.3815e-02 4.0677e-02 weaklyHypometh 7.0859e-01 1.0000e+00 insignificant 7.8783e-02 2.4949e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00007920 9.9844e-01 insignificant 1.0000e+00 insignificant 0.2842491 0.400262 -0.0853582 11 0.289917 0.346560 -0.0566431 9.9874e-01 1.2623e-07 weaklyHypometh 1.0000e+00 0.00012623 weaklyHypometh 9.9413e-01 3.6359e-06 weaklyHypometh 1.00000000 0.0036359 weaklyHypometh -0.0776492 0.12264535 insignificant 1.000000 insignificant 0.237210 0.273751 -0.0424997 13 0.273495 0.316532 -0.04303723 6.3079e-01 6.4529e-03 weaklyHypometh 1.0000e+00 8.0662e-01 insignificant 5.1296e-01 2.0124e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.02390324 5.4572e-01 insignificant 1.0000e+00 insignificant 0.236991 0.400262 -0.12315844 11 0.250173 0.346560 -0.0963873 9.9999e-01 1.2505e-10 weaklyHypometh 1.0000e+00 1.2505e-07 weaklyHypometh 0.9986595 3.8719e-06 weaklyHypometh 1.00000 0.0038719 weaklyHypometh -0.10163159 0.05360947 insignificant 1.00000 insignificant 0.273664 0.400393 -0.0731640 11 0.288306 0.373219 -0.0849126 9.9914e-01 2.5637e-03 weaklyHypometh 1.00000000 5.5732e-02 weaklyHypometh 0.99760300 1.3934e-02 weaklyHypometh 1.00000 3.4163e-01 insignificant -0.07772835 1.5319e-01 insignificant 1.0000e+00 insignificant chr1 151937101 151938101 3077 NPR1 ENSG00000169418 0.327518 582 10 0.1370815 386 11 0.276872 457 11 0.2141707 494 8 0.1573435 333 11 0.488558 661 11 0.414797 459 11 0.117162 409 11 0.170653 699 11 0.286484 593 11 0.3540968 507 11 0.267553 439 11 0.179299 570 11 0.366633 218 5 0.1611461 516 11 0.177527 445 11 0.127626 414 11 0.391680 645 9 0.112748 323 11 0.227428 549 10 0.200420 180 10 0.152085 285 8 0.302914 544 11 0.221155 247 11 0.356878 145 8 0.189111 536 11 0.1787146 322 11 0.1506105 184 10 0.182042 385 11 0.166918 644 11 0.088640 646 11 0.331426 640 11 0.163183 438 11 0.3031364 306 11 0.168143 234 5 0.288888 121 8 0.239084 170 10 0.326526 420 11 0.291383 589 9 0.442645 553 11 0.2002618 561 8 0.3733054 460 8 0.2822005 431 11 0.2744335 0.1482747 0.256313 0.223996 0.165454 0.3586674 0.360516 0.1321370 0.151821 0.193588 0.2946141 0.206103 0.148811 0.260705 0.157963 0.167908 0.1372580 0.3024797 0.1023706 0.1729771 0.260263 0.1469331 0.270696 0.221570 0.276269 0.190732 0.1376137 0.165735 0.217457 0.1741583 0.078847 0.2023064 0.170301 0.25530694 0.33576755 0.225637 0.2423524 0.2555544 0.2964936 0.376583 0.231722 0.298605 0.2580857 8 0.255387 0.197183 0.03635330 11 0.263192 0.183034 0.0801587 0.0065361 9.9993e-01 weaklyHypermeth 1 1.0000e+00 insignificant 0.161477 9.8682e-01 insignificant 1 1.0000000 insignificant 0.03774263 0.276410 insignificant 1 insignificant 0.2551105 0.240664 -0.02756260 11 0.233962 0.263119 -0.02915723 3.8147e-01 3.5126e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 2.7942e-01 2.3940e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00034124 9.9295e-01 insignificant 1.0000e+00 insignificant 0.2552862 0.362375 -0.0845616 9 0.251502 0.303000 -0.0514981 9.9560e-01 4.2887e-07 weaklyHypometh 1.0000e+00 0.00021443 weaklyHypometh 9.7905e-01 1.7743e-05 weaklyHypometh 1.00000000 0.0059142 weaklyHypometh -0.0701402 0.18941754 insignificant 1.000000 insignificant 0.197136 0.240379 -0.0570985 11 0.180206 0.241192 -0.06098664 9.0208e-01 6.0109e-03 weaklyHypometh 1.0000e+00 8.0662e-01 insignificant 6.7358e-01 2.1257e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.03808386 3.2204e-01 insignificant 1.0000e+00 insignificant 0.197391 0.362375 -0.11718885 9 0.213539 0.303000 -0.0894610 9.9993e-01 3.9217e-09 weaklyHypometh 1.0000e+00 1.9609e-06 weaklyHypometh 0.9942770 6.5322e-05 weaklyHypometh 1.00000 0.0326612 weaklyHypometh -0.10788288 0.05945975 insignificant 1.00000 insignificant 0.240664 0.362514 -0.0498315 9 0.263119 0.330546 -0.0674265 9.9615e-01 1.3552e-02 weaklyHypometh 1.00000000 2.2887e-01 insignificant 0.98778509 6.2431e-02 insignificant 1.00000 1.0000e+00 insignificant -0.06979901 2.0654e-01 insignificant 1.0000e+00 insignificant chr1 152592101 152593101 3089 ATP8B2 ENSG00000143515 0.074781 543 12 0.0564671 656 16 0.082386 688 12 0.0836585 613 8 0.0194923 304 12 0.065295 776 12 0.035332 313 12 0.021462 314 8 0.014816 527 8 0.062816 451 8 0.1256015 267 8 0.021931 272 8 0.160678 411 8 0.054829 262 8 0.0212037 467 8 0.033974 275 8 0.012271 157 5 0.103148 1215 10 0.032895 243 8 0.050725 568 8 0.084936 159 8 0.022456 262 8 0.126277 588 12 0.046152 172 12 0.158462 211 8 0.062381 599 12 0.1561182 389 8 0.0090114 189 8 0.051712 382 8 0.124599 660 12 0.072896 641 12 0.085113 539 12 0.072159 525 12 0.0857741 338 8 0.099247 335 9 0.000000 52 5 0.095837 227 8 0.054455 614 16 0.111925 548 8 0.118657 478 8 0.0173611 546 8 0.0093661 840 8 0.0785051 566 12 0.0316735 0.0768989 0.116272 0.042138 0.031634 0.0655409 0.041196 0.0355128 0.024088 0.072631 0.0792014 0.034653 0.054394 0.053923 0.021671 0.053373 0.0298161 0.0394442 0.0377591 0.0481954 0.012842 0.0346120 0.073844 0.068118 0.052060 0.082919 0.0924917 0.017579 0.054196 0.0836838 0.092878 0.0576365 0.115855 0.08463444 0.08547876 0.053023 0.0926424 0.0577312 0.0581279 0.035374 0.026669 0.015095 0.0317282 8 0.056432 0.078706 -0.01758307 12 0.087911 0.136779 -0.0488682 0.8863845 6.9820e-01 insignificant 1 1.0000e+00 insignificant 0.991306 6.1689e-01 insignificant 1 1.0000000 insignificant -0.02665467 0.127693 insignificant 1 insignificant 0.0564681 0.104256 -0.04128472 12 0.093082 0.076471 0.01661128 4.5036e-01 5.1859e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 7.7561e-01 7.9567e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01122406 5.3919e-01 insignificant 1.0000e+00 insignificant 0.0564681 0.036266 0.0188977 8 0.093082 0.121668 -0.0285865 2.1557e-02 9.5366e-01 weaklyHypermeth 1.0000e+00 1.00000000 insignificant 2.4446e-01 9.9747e-01 insignificant 1.00000000 1.0000000 insignificant -0.0104749 0.68806169 insignificant 1.000000 insignificant 0.078513 0.104256 -0.0182878 12 0.086001 0.076471 0.00953052 8.4511e-01 2.1416e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.7565e-01 8.1129e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.01543061 4.7081e-01 insignificant 1.0000e+00 insignificant 0.078513 0.036266 0.03804834 8 0.086001 0.121668 -0.0356672 9.0555e-02 9.9401e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.3889305 9.9963e-01 insignificant 1.00000 1.0000000 insignificant 0.01617977 0.56808457 insignificant 1.00000 insignificant 0.104256 0.036266 0.0677819 8 0.076471 0.121668 -0.0451977 8.7242e-02 9.9984e-01 insignificant 1.00000000 1.0000e+00 insignificant 0.83336305 9.9936e-01 insignificant 1.00000 1.0000e+00 insignificant 0.00074916 9.7906e-01 insignificant 1.0000e+00 insignificant chr1 153310401 153311401 3109 ENSG00000143620 0.055461 300 8 0.0571517 282 8 0.057129 316 8 0.0532607 417 8 0.0208333 127 8 0.044887 450 8 0.059533 320 8 0.059903 224 8 0.052701 262 8 0.183331 297 8 0.0516826 390 8 0.033232 292 8 0.054462 268 8 NA 0 0 0.0408921 338 8 0.042892 199 8 0.085615 254 8 0.035380 381 8 0.028834 233 8 0.038096 478 8 0.091904 154 8 0.020246 320 6 0.069481 322 8 0.073279 152 8 0.134532 215 6 0.060911 408 8 0.0086347 172 8 0.0357945 127 8 0.035406 256 8 0.060186 351 8 0.051977 389 8 0.144781 442 8 0.013889 187 8 0.0152244 188 8 0.168803 229 5 0.032895 148 6 0.000000 94 8 0.005000 213 8 0.067256 443 8 0.029614 434 8 0.0414266 326 6 0.0633606 402 8 0.0683582 340 6 0.0614849 0.0656786 0.068761 0.057320 0.020020 0.0684269 0.068695 0.0655801 0.062119 0.084467 0.0570071 0.044816 0.051986 NA 0.049559 0.044884 0.0978753 0.0350347 0.0352688 0.0388163 0.114588 0.0226181 0.061184 0.075190 0.072905 0.061156 0.0097885 0.040878 0.035676 0.0629808 0.049403 0.0484265 0.013455 0.00726162 0.13353410 0.033512 0.0000000 0.0048437 0.0633089 0.018349 0.047920 0.051180 0.0807808 6 0.049931 0.054716 0.00067168 8 0.100980 0.084217 0.0167628 0.7256171 4.7462e-01 insignificant 1 1.0000e+00 insignificant 0.525317 8.0592e-01 insignificant 1 1.0000000 insignificant -0.01005328 0.491756 insignificant 1 insignificant 0.0499314 0.035883 0.00834958 8 0.100980 0.034521 0.06645873 1.8139e-04 9.5480e-01 weaklyHypermeth 3.7789e-03 1.0000e+00 weaklyHypermeth 2.8134e-05 1.0000e+00 weaklyHypermeth 1.2232e-03 1.0000e+00 weaklyHypermeth 0.01623908 5.7594e-01 insignificant 1.0000e+00 insignificant 0.0497769 0.056041 0.0015738 8 0.051102 0.057096 -0.0059942 2.5187e-01 1.2360e-03 inconclusive 1.0000e+00 0.15450244 insignificant 2.6883e-01 1.5215e-01 insignificant 1.00000000 1.0000000 insignificant 0.0015379 0.89150843 insignificant 1.000000 insignificant 0.054716 0.035883 0.0080130 8 0.084217 0.034521 0.04969594 7.0323e-04 9.9030e-01 weaklyHypermeth 1.3269e-02 1.0000e+00 weaklyHypermeth 3.3245e-04 1.0000e+00 weaklyHypermeth 1.1464e-02 1.0000000 weaklyHypermeth 0.02629237 3.9294e-01 insignificant 1.0000e+00 insignificant 0.054463 0.056041 0.00174674 8 0.053077 0.057096 -0.0040190 5.7155e-01 1.3730e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.6113625 2.5003e-01 insignificant 1.00000 1.0000000 insignificant 0.01159115 0.43201246 insignificant 1.00000 insignificant 0.035951 0.056041 -0.0112619 8 0.038836 0.057096 -0.0182603 9.9898e-01 8.8019e-04 weaklyHypometh 1.00000000 2.2900e-02 weaklyHypometh 0.99999998 2.2336e-04 weaklyHypometh 1.00000 1.1168e-02 weaklyHypometh -0.01470122 6.1185e-01 insignificant 1.0000e+00 insignificant chr1 154071101 154072101 3121 GON4L ENSG00000116580 0.857594 325 10 0.7943426 268 10 0.668587 1523 10 0.9240727 266 7 0.8277291 2572 8 0.886886 335 10 0.841009 3390 10 0.889480 307 10 0.777833 1552 10 0.871388 1507 10 0.8367236 381 10 0.861511 3355 10 0.829692 690 10 0.896137 794 7 0.8671197 3142 10 0.860506 2611 9 0.807560 365 10 0.799525 266 9 0.866354 273 10 0.860653 270 10 0.786779 92 6 0.717857 72 7 0.878811 471 10 0.918501 202 10 0.918333 51 6 0.869010 224 10 0.8525325 148 10 0.8860347 437 7 0.799536 425 10 0.907989 260 9 0.837461 169 9 0.851104 461 10 0.854246 354 10 0.7445118 333 10 0.897820 363 8 0.840593 188 10 0.862645 336 10 0.904025 229 10 0.695751 1115 10 0.787299 382 9 0.9016021 476 9 0.8014786 1070 10 0.7974691 537 10 0.8933129 0.8345167 0.787087 0.913676 0.853685 0.8788988 0.878581 0.8988877 0.825922 0.881834 0.8465651 0.882720 0.852699 0.902573 0.889077 0.871700 0.8393080 0.8539227 0.8857046 0.8955199 0.741075 0.7951389 0.885635 0.924077 0.896499 0.887348 0.8565173 0.893546 0.858872 0.9280853 0.890167 0.8646173 0.857886 0.74750227 0.84940823 0.860193 0.8363312 0.9028069 0.7896362 0.867588 0.899821 0.858703 0.8623043 6 0.874421 0.872510 -0.01615033 10 0.838914 0.857797 -0.0188825 0.9888358 1.9025e-02 weaklyHypometh 1 1.0000e+00 insignificant 0.976319 3.2791e-02 weaklyHypometh 1 1.0000000 insignificant -0.01076060 0.616476 insignificant 1 insignificant 0.8744213 0.841375 0.02721279 10 0.838914 0.858224 -0.01930986 7.7352e-08 1.0874e-02 weaklyHypermeth 2.4952e-06 1.0000e+00 weaklyHypermeth 5.9776e-03 7.7046e-03 weaklyHypermeth 1.2889e-01 1.0000e+00 insignificant -0.00940507 7.3216e-01 insignificant 1.0000e+00 insignificant 0.8744213 0.872626 -0.0136996 10 0.838914 0.800333 0.0385814 8.2698e-02 6.5225e-03 weaklyHypometh 1.0000e+00 0.50173399 insignificant 1.4082e-01 1.9156e-01 insignificant 1.00000000 1.0000000 insignificant 0.0445152 0.25587996 insignificant 1.000000 insignificant 0.872510 0.841375 0.0383128 10 0.857797 0.858224 -0.00042739 6.0904e-05 1.7187e-01 weaklyHypermeth 1.6027e-03 1.0000e+00 weaklyHypermeth 1.7833e-03 1.9572e-01 weaklyHypermeth 4.9536e-02 1.0000000 weaklyHypermeth 0.00135553 9.6382e-01 insignificant 1.0000e+00 insignificant 0.872510 0.872626 0.03041538 10 0.857797 0.800333 0.0574639 4.9298e-02 9.6831e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.0433403 9.8139e-01 weaklyHypermeth 1.00000 1.0000000 insignificant 0.05527578 0.18220545 insignificant 1.00000 insignificant 0.841375 0.872626 -0.0261315 10 0.858224 0.800333 0.0578913 1.0261e-03 3.1016e-03 weaklyHypometh 0.25653218 6.4616e-02 weaklyHypometh 0.03102711 9.6103e-03 weaklyHypometh 1.00000 2.6695e-01 insignificant 0.05392025 2.1888e-01 insignificant 1.0000e+00 insignificant chr1 154136601 154137601 3126 ENSG00000201614 0.584662 64 5 0.5367184 106 5 0.583333 17 0 0.5150000 49 5 0.3466667 29 2 0.500000 72 5 0.497778 31 2 0.568333 51 5 0.543590 33 2 0.571429 28 5 0.5622096 144 5 0.833333 6 0 0.455000 30 2 0.500000 27 2 0.6228070 42 2 0.500000 9 1 NA 0 0 0.661508 56 3 0.477706 67 5 0.586667 43 5 0.533333 18 0 1.000000 2 0 0.680952 38 2 0.416667 24 2 0.628261 38 4 0.513624 72 5 0.5250000 30 4 0.7142857 11 1 0.612778 62 5 0.548640 86 5 0.541414 60 5 0.422917 65 4 0.550758 67 5 0.3511364 50 4 0.481143 79 5 0.625000 11 1 0.343487 49 5 0.380672 72 5 0.726111 57 4 0.516667 76 5 0.5953704 57 4 0.6000000 21 1 0.5655556 84 5 0.6732546 0.6282683 0.559524 0.653571 0.504762 0.5952381 0.609524 0.6345238 0.673993 0.714286 0.6301497 0.718419 0.503571 0.642857 0.715539 0.623181 NA 0.7724490 0.6543599 0.7047619 0.571429 NA 0.744898 0.488095 0.686115 0.705555 0.6607143 0.795918 0.691667 0.6625627 0.672439 0.6303571 0.631494 0.51866883 0.57224471 0.684670 0.5465186 0.5951981 0.7662698 0.603741 0.796032 0.714286 0.6738095 0 0.605759 0.598814 -0.00813241 5 0.491788 0.470762 0.0210268 0.7086741 4.8530e-01 insignificant 1 1.0000e+00 insignificant 0.816559 4.1573e-01 insignificant 1 1.0000000 insignificant -0.04499424 0.384259 lowCoverage 1 lowCoverage 0.6061947 0.506098 0.07239333 5 0.564390 0.337202 0.22718847 1.7039e-02 9.9964e-01 weaklyHypermeth 2.1844e-01 1.0000e+00 insignificant 4.5436e-02 9.9977e-01 weaklyHypermeth 7.2120e-01 1.0000e+00 insignificant 0.09446237 1.1244e-01 lowCoverage 1.0000e+00 lowCoverage 0.6057586 0.674576 -0.0406849 4 0.491788 0.494639 -0.0028509 8.6545e-01 6.5877e-02 lowCoverage 1.0000e+00 1.00000000 lowCoverage 9.3885e-01 1.8085e-01 lowCoverage 1.00000000 1.0000000 lowCoverage -0.0509123 0.25320032 lowCoverage 1.000000 lowCoverage 0.598814 0.507645 0.0842468 5 0.470762 0.393402 0.07735977 1.2503e-02 9.9998e-01 weaklyHypermeth 1.7127e-01 1.0000e+00 insignificant 3.8323e-02 9.9995e-01 weaklyHypermeth 6.7233e-01 1.0000000 insignificant 0.13945661 5.2502e-02 lowCoverage 1.0000e+00 lowCoverage 0.598814 0.674576 -0.02824611 4 0.470762 0.494639 -0.0238777 9.6181e-01 4.3474e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.9654813 5.3368e-01 lowCoverage 1.00000 1.0000000 lowCoverage -0.00591810 0.91863692 lowCoverage 1.00000 lowCoverage 0.507645 0.674576 -0.1187790 4 0.393402 0.494639 -0.1012375 9.9987e-01 6.3962e-03 lowCoverage 1.00000000 1.2300e-01 lowCoverage 0.99997087 2.3678e-02 lowCoverage 1.00000 4.9330e-01 lowCoverage -0.14537471 3.6264e-02 lowCoverage 7.5551e-01 lowCoverage chr1 154342401 154343401 3136 LMNA ENSG00000160789 0.311829 443 11 0.3068956 489 14 0.163720 364 14 0.2919291 460 12 0.2303159 305 12 0.398000 583 15 0.184144 490 14 0.211943 415 14 0.215021 431 14 0.230092 414 13 0.2710922 725 14 0.198399 324 12 0.282112 436 14 0.173562 265 10 0.3578049 472 11 0.231682 324 14 0.320022 990 8 0.205409 447 15 0.431346 403 13 0.254742 480 14 0.337854 278 11 0.221965 330 12 0.211443 379 13 0.299364 253 11 0.205726 386 12 0.244596 515 15 0.3522741 548 13 0.2039556 328 12 0.297134 329 12 0.202542 414 15 0.285462 375 14 0.344456 546 14 0.220494 476 14 0.2804222 376 12 0.215462 586 13 0.415961 152 8 0.202602 434 12 0.273250 510 17 0.329913 392 14 0.336200 443 15 0.2757816 392 12 0.3463423 346 12 0.3024906 418 15 0.3865351 0.3678199 0.279173 0.371432 0.362702 0.4155881 0.349254 0.3477944 0.378802 0.395942 0.3921203 0.359296 0.389504 0.335069 0.395802 0.412864 0.3774365 0.3644702 0.4255139 0.4003035 0.439770 0.3221331 0.389156 0.382189 0.371463 0.390737 0.3484961 0.409907 0.360825 0.4008319 0.364568 0.3993679 0.324645 0.32515170 0.33865065 0.383555 0.3365793 0.3700321 0.4077607 0.430981 0.386869 0.383015 0.4226481 10 0.366072 0.317589 -0.00257681 12 0.231374 0.262203 -0.0308286 0.9932256 9.8479e-01 insignificant 1 1.0000e+00 insignificant 0.998218 9.5915e-01 insignificant 1 1.0000000 insignificant -0.00372787 0.876237 insignificant 1 insignificant 0.3663602 0.363600 0.03249468 12 0.258314 0.223752 0.03456174 6.4481e-02 7.6924e-01 insignificant 7.0859e-01 1.0000e+00 insignificant 2.2442e-01 9.2880e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00452882 9.0392e-01 insignificant 1.0000e+00 insignificant 0.3663206 0.365143 -0.0306785 11 0.247551 0.362115 -0.1145643 9.9610e-01 1.4918e-02 weaklyHypometh 1.0000e+00 0.78005610 insignificant 9.9967e-01 3.1309e-02 weaklyHypometh 1.00000000 1.0000000 insignificant -0.0546423 0.01782405 weaklyHypometh 0.685540 insignificant 0.318377 0.363600 0.0334777 13 0.284033 0.223752 0.06028021 1.5256e-01 9.8495e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.8387e-01 9.9718e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.00080095 9.8305e-01 insignificant 1.0000e+00 insignificant 0.318377 0.364824 -0.02726972 11 0.284033 0.334381 -0.0503486 9.7704e-01 7.2096e-03 weaklyHypometh 1.0000e+00 8.2683e-01 insignificant 0.9894037 2.9908e-02 weaklyHypometh 1.00000 1.0000000 insignificant -0.05091446 0.03107249 weaklyHypometh 1.00000 insignificant 0.363744 0.364505 -0.0631325 11 0.233923 0.304126 -0.0702029 9.9904e-01 1.2338e-02 weaklyHypometh 1.00000000 2.1646e-01 insignificant 0.99993358 7.4268e-02 insignificant 1.00000 1.0000e+00 insignificant -0.05011352 1.9615e-01 insignificant 1.0000e+00 insignificant chr1 154342601 154343601 3137 LMNA ENSG00000160789 0.002000 240 5 0.0090909 102 8 0.000000 152 8 0.0063951 218 6 0.0037037 120 6 0.194322 169 9 0.000000 167 8 0.018182 168 8 0.045455 161 8 0.010031 147 7 0.0022727 192 8 0.000000 126 6 0.015873 158 8 0.000000 83 4 0.0059524 110 5 0.000000 150 8 0.000000 41 2 0.069407 236 9 0.233422 163 7 0.087798 177 8 0.148026 139 5 0.005848 167 6 0.055556 135 7 0.050000 85 5 0.022727 222 6 0.000000 235 9 0.1313131 214 7 0.0588235 135 6 0.030303 113 6 0.010023 196 9 0.000000 139 8 0.168205 195 8 0.000000 125 8 0.0000000 186 6 0.000000 88 7 0.200000 46 2 0.053896 68 6 0.048611 231 9 0.152006 162 8 0.030220 168 9 0.1643492 137 6 0.0926244 167 6 0.0091479 157 9 0.0036825 0.0031746 0.000000 0.014664 0.010265 0.0017460 0.000000 0.0063492 0.000000 0.011258 0.0069986 0.000000 0.000000 0.000000 0.008768 0.000000 0.0016707 0.0036103 0.0073344 0.0024943 0.034294 0.0115288 0.000000 0.017460 0.000000 0.000000 0.0038801 0.000000 0.011640 0.0099375 0.000000 0.0061587 0.000000 0.00039683 0.00039683 0.000000 0.0099773 0.0015873 0.0297119 0.006576 0.040150 0.000000 0.0096909 4 0.009756 0.011657 -0.00118306 6 0.094485 0.136685 -0.0421995 0.9880717 9.9304e-01 insignificant 1 1.0000e+00 insignificant 0.991556 9.9264e-01 insignificant 1 1.0000000 insignificant -0.02154023 0.352476 insignificant 1 insignificant 0.0094617 0.012113 -0.00010068 6 0.071912 0.038580 0.03333210 7.1163e-01 4.4395e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.2344e-01 7.4490e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01522266 6.7536e-01 insignificant 1.0000e+00 insignificant 0.0094586 0.032870 -0.0106270 5 0.067418 0.204770 -0.1373523 9.4125e-01 1.9292e-01 insignificant 1.0000e+00 1.00000000 insignificant 9.9079e-01 1.7373e-01 insignificant 1.00000000 1.0000000 insignificant -0.0544743 0.16637768 insignificant 1.000000 insignificant 0.010246 0.012113 0.0021608 7 0.111582 0.038580 0.07300249 9.6084e-01 8.9797e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.5251e-01 9.6535e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.00631757 8.6517e-01 insignificant 1.0000e+00 insignificant 0.010246 0.031646 -0.00914354 5 0.111582 0.151754 -0.0401721 8.4745e-01 7.6034e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 0.9513884 8.2258e-02 insignificant 1.00000 1.0000000 insignificant -0.03293405 0.38850352 insignificant 1.00000 insignificant 0.012129 0.030418 -0.0101483 5 0.041336 0.091166 -0.0498299 9.5622e-01 5.7124e-01 insignificant 1.00000000 1.0000e+00 insignificant 0.99528307 6.8754e-01 insignificant 1.00000 1.0000e+00 insignificant -0.03925161 4.0031e-01 insignificant 1.0000e+00 insignificant chr1 154714301 154715301 3146 C1orf61 ENSG00000125462 0.802411 260 7 0.8450688 283 8 0.764026 151 7 0.8056280 245 7 0.8946188 143 5 0.830831 331 7 0.715606 189 6 0.713217 191 6 0.848748 168 8 0.788037 121 5 0.7581398 313 7 0.677450 81 5 0.707400 157 5 0.643838 81 5 0.8389885 140 5 0.849991 91 4 0.426923 58 4 0.839815 328 6 0.824257 233 8 0.883177 268 7 0.690625 90 5 0.771635 54 3 0.792316 175 7 0.866630 107 5 0.689440 66 4 0.747133 277 8 0.7472997 119 4 0.6900000 78 4 0.774152 194 7 0.792895 267 7 0.850680 313 8 0.671549 288 7 0.731718 189 6 0.8068664 153 5 0.721870 267 5 0.458333 17 1 0.827332 134 6 0.793590 285 8 0.801519 244 8 0.794056 262 7 0.8720042 251 8 0.8448291 201 5 0.9022578 279 7 0.9196214 0.8759962 0.810245 0.946380 0.883228 0.8570162 0.802593 0.8632373 0.861948 0.873117 0.8762330 0.753087 0.848760 0.896514 0.859742 0.820638 0.6167751 0.8951238 0.8948203 0.9167873 0.920234 0.9489850 0.901752 0.867413 0.763588 0.889636 0.8037336 0.828760 0.906922 0.9508500 0.895021 0.9032421 0.800059 0.64851709 0.80672086 0.824110 0.8358863 0.8820999 0.9214141 0.850201 0.933851 0.925001 0.9274576 4 0.847480 0.875247 -0.02081176 6 0.744786 0.746343 -0.0015561 0.7471659 2.1746e-01 insignificant 1 1.0000e+00 insignificant 0.793996 1.1564e-01 insignificant 1 1.0000000 insignificant 0.01587903 0.602979 insignificant 1 insignificant 0.8474798 0.792344 0.05610002 5 0.744786 0.781105 -0.03631883 5.0811e-03 8.6508e-01 weaklyHypermeth 7.2588e-02 1.0000e+00 weaklyHypermeth 1.6305e-01 9.2230e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.04962367 4.4011e-01 insignificant 1.0000e+00 insignificant 0.8483264 0.881973 -0.0399054 6 0.799265 0.839024 -0.0397589 9.8238e-01 4.5840e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant 9.8812e-01 4.2277e-02 weaklyHypometh 1.00000000 1.0000000 insignificant -0.0700247 0.04138990 weaklyHypometh 1.000000 insignificant 0.875247 0.792344 0.0777554 5 0.746343 0.781105 -0.03476276 4.6130e-03 9.5785e-01 weaklyHypermeth 7.0529e-02 1.0000e+00 weaklyHypermeth 6.7252e-02 9.6101e-01 insignificant 9.3406e-01 1.0000000 insignificant 0.03374464 5.8559e-01 insignificant 1.0000e+00 insignificant 0.876421 0.881973 -0.01858138 7 0.780977 0.839024 -0.0580472 9.7577e-01 2.4563e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.9479038 2.1426e-01 insignificant 1.00000 1.0000000 insignificant -0.08590371 0.01043577 weaklyHypometh 1.00000 insignificant 0.791946 0.881973 -0.0987788 5 0.759216 0.839024 -0.0798082 9.9983e-01 4.3484e-03 weaklyHypometh 1.00000000 8.8744e-02 weaklyHypometh 0.99984966 4.1348e-02 weaklyHypometh 1.00000 7.3835e-01 insignificant -0.11964836 8.8131e-02 insignificant 1.0000e+00 insignificant chr1 154741301 154742301 3150 MEF2D ENSG00000116604 0.559407 216 14 0.3901739 310 16 0.287332 237 9 0.4288607 188 14 0.3892996 233 15 0.449977 215 13 0.382689 278 13 0.365108 276 13 0.419260 237 13 0.485317 249 9 0.4772875 407 13 0.282433 246 13 0.425823 235 13 0.384644 136 13 0.3935925 236 11 0.242687 179 6 0.019374 127 4 0.389861 260 11 0.468375 214 16 0.408171 170 15 0.478412 91 7 0.316976 114 4 0.517265 191 7 0.450048 127 4 0.495661 168 15 0.505740 381 17 0.4308386 165 12 0.3593750 133 9 0.445453 205 15 0.466501 312 16 0.439758 335 17 0.428585 260 17 0.296692 267 14 0.3688887 220 14 0.470563 241 16 0.388889 32 2 0.314734 181 12 0.487147 268 17 0.456470 214 13 0.531549 182 14 0.4489615 185 13 0.5330357 146 9 0.5177727 160 13 0.3186851 0.2739865 0.264336 0.318407 0.242628 0.3814630 0.275528 0.3293180 0.314839 0.370844 0.3517591 0.206392 0.281718 0.308295 0.304196 0.207068 0.2393800 0.3592306 0.3291197 0.3410347 0.328011 0.2229557 0.376334 0.323636 0.371513 0.356107 0.3499537 0.303630 0.321054 0.3329644 0.327700 0.3209631 0.220914 0.25587146 0.27694656 0.274861 0.3149684 0.3023569 0.3580611 0.420205 0.312794 0.342657 0.3343274 2 0.311921 0.344883 -0.02093759 16 0.355675 0.474561 -0.1188856 0.9996017 3.2360e-02 weaklyHypometh 1 1.0000e+00 insignificant 0.999505 1.4747e-02 weaklyHypometh 1 1.0000000 insignificant -0.06206744 0.048991 weaklyHypometh 1 insignificant 0.3125405 0.344086 0.03960980 15 0.413011 0.412280 0.00073046 2.6070e-03 9.8189e-01 weaklyHypermeth 3.9500e-02 1.0000e+00 weaklyHypermeth 1.3690e-02 9.9017e-01 weaklyHypermeth 2.5830e-01 1.0000e+00 insignificant -0.00533545 8.9786e-01 insignificant 1.0000e+00 insignificant 0.3122162 0.541150 -0.0482964 13 0.408178 0.446155 -0.0379768 9.9560e-01 2.9711e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant 9.9100e-01 1.0767e-01 insignificant 1.00000000 1.0000000 insignificant -0.1150741 0.00159105 weaklyHypometh 0.134323 insignificant 0.344256 0.342999 0.0646121 15 0.448976 0.379629 0.06934714 6.9019e-06 1.0000e+00 weaklyHypermeth 2.0300e-04 1.0000e+00 weaklyHypermeth 5.5601e-04 1.0000e+00 weaklyHypermeth 1.8534e-02 1.0000000 weaklyHypermeth 0.05673199 1.5579e-01 insignificant 1.0000e+00 insignificant 0.344256 0.541150 -0.01057504 14 0.448976 0.446155 0.0028215 8.0980e-01 2.1880e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.9039169 6.3208e-01 insignificant 1.00000 1.0000000 insignificant -0.05300669 0.05852421 insignificant 1.00000 insignificant 0.342999 0.541150 -0.0723046 13 0.379629 0.446155 -0.0665256 9.9989e-01 8.9309e-04 weaklyHypometh 1.00000000 2.2900e-02 weaklyHypometh 0.99999783 8.3677e-03 weaklyHypometh 1.00000 2.4533e-01 insignificant -0.10973867 1.8407e-02 weaklyHypometh 5.6052e-01 insignificant chr1 155049801 155050801 3159 PRCC ENSG00000143294 0.052221 691 18 0.0601641 584 18 0.110568 627 18 0.0386818 605 16 0.0477336 362 18 0.073578 1045 18 0.069285 722 18 0.084403 591 18 0.050976 706 18 0.037491 521 18 0.1021515 768 18 0.046139 539 18 0.104426 621 18 0.152856 225 12 0.0553623 590 18 0.055258 546 18 0.041558 330 13 0.095027 733 18 0.069125 546 18 0.048736 917 18 0.049475 338 15 0.042874 396 15 0.105604 563 18 0.038139 406 17 0.108496 248 13 0.081694 792 18 0.1179601 575 18 0.0521333 388 22 0.092556 527 18 0.047818 781 18 0.057456 907 18 0.052574 921 18 0.048316 526 18 0.0495615 618 18 0.097436 545 15 0.021018 191 13 0.186158 385 17 0.055065 778 18 0.055077 960 18 0.054976 895 18 0.0408025 555 18 0.1015006 930 18 0.0505269 692 18 0.0788195 0.0554529 0.132746 0.050388 0.071616 0.0888450 0.096929 0.0526874 0.067070 0.060343 0.0780882 0.071069 0.145485 0.117432 0.071880 0.084411 0.0888005 0.0676831 0.1035780 0.0632113 0.087145 0.0659919 0.069952 0.059648 0.067976 0.047732 0.0763513 0.043390 0.057706 0.0664279 0.086779 0.0801666 0.062766 0.06470163 0.10694172 0.018884 0.1172692 0.0756895 0.0878836 0.074316 0.059959 0.066426 0.0679394 16 0.072133 0.064601 0.01382656 18 0.132794 0.070828 0.0619662 0.3766485 9.9983e-01 insignificant 1 1.0000e+00 insignificant 0.212278 9.9966e-01 insignificant 1 1.0000000 insignificant -0.00077802 0.942596 insignificant 1 insignificant 0.0719530 0.106145 -0.00734415 18 0.079272 0.158502 -0.07923004 6.1854e-02 2.4272e-01 insignificant 6.9499e-01 1.0000e+00 insignificant 1.4877e-01 7.3421e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00647210 8.0530e-01 insignificant 1.0000e+00 insignificant 0.0721624 0.070685 0.0057944 18 0.149393 0.083201 0.0661921 2.6072e-01 9.4935e-01 insignificant 1.0000e+00 1.00000000 insignificant 2.6940e-01 9.6675e-01 insignificant 1.00000000 1.0000000 insignificant 0.0092105 0.48364906 insignificant 1.000000 insignificant 0.064815 0.106145 -0.0201000 18 0.083117 0.158502 -0.07538438 4.3703e-01 5.3837e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 6.1517e-01 2.1783e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.00569408 8.3084e-01 insignificant 1.0000e+00 insignificant 0.064667 0.070685 -0.00738851 18 0.079681 0.083201 -0.0035199 6.3842e-01 4.7278e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.8377443 5.5288e-01 insignificant 1.00000 1.0000000 insignificant 0.00998850 0.47587469 insignificant 1.00000 insignificant 0.106145 0.070506 0.0141238 18 0.158502 0.049841 0.1086605 4.9308e-01 7.0106e-01 insignificant 1.00000000 1.0000e+00 insignificant 0.77393867 8.0567e-01 insignificant 1.00000 1.0000e+00 insignificant 0.01568258 5.7135e-01 insignificant 1.0000e+00 insignificant chr1 155232701 155233701 3169 ARHGEF11 ENSG00000132694 0.879956 244 7 0.7979798 76 7 0.734599 85 7 0.8592977 137 7 0.9059524 52 7 0.860535 197 7 0.835049 111 7 0.753231 87 7 0.896370 87 7 0.909751 78 7 0.8261015 188 7 0.874760 79 7 0.856909 122 7 NA 0 0 0.8126649 117 7 0.849103 87 7 0.854071 95 7 0.835426 124 7 0.860853 90 7 0.872416 197 7 0.867687 44 6 0.814076 63 7 0.870985 171 7 0.809524 39 3 0.930612 41 7 0.787193 112 7 0.9841270 37 5 0.8571429 17 1 0.829670 64 7 0.851027 166 7 0.871455 140 7 0.892790 287 7 0.826787 81 7 0.7803030 82 7 0.832558 150 7 0.893878 86 7 0.776515 44 3 0.727489 97 7 0.879683 270 7 0.891230 208 7 0.8575719 207 7 0.8890410 251 7 0.8577055 224 7 0.8641859 0.7522588 0.737616 0.838417 0.890117 0.8552019 0.827744 0.7578308 0.900593 0.901188 0.8372849 0.859232 0.848721 NA 0.801569 0.827710 0.8376133 0.8341248 0.8437969 0.8571126 0.873367 0.8201815 0.867458 0.812395 0.932950 0.789016 0.9771078 0.919598 0.831529 0.8561228 0.880937 0.8845239 0.822048 0.76298157 0.82828809 0.874946 0.7890399 0.7356111 0.8718505 0.871918 0.846272 0.882095 0.8436115 3 0.850422 0.863675 -0.02337064 7 0.849084 0.867583 -0.0184989 0.9141630 5.9508e-02 insignificant 1 1.0000e+00 insignificant 0.784555 6.1316e-03 weaklyHypometh 1 1.0000000 insignificant -0.01780337 0.358870 insignificant 1 insignificant 0.8504217 0.809259 0.03011715 7 0.849084 0.816728 0.03235620 7.4891e-02 9.8076e-01 insignificant 8.0528e-01 1.0000e+00 insignificant 4.7355e-02 9.9007e-01 weaklyHypermeth 7.2524e-01 1.0000e+00 insignificant 0.03979908 1.6560e-01 insignificant 1.0000e+00 insignificant 0.8504217 0.891379 -0.0274358 7 0.849084 0.876421 -0.0273363 9.9023e-01 9.4127e-02 insignificant 1.0000e+00 1.00000000 insignificant 9.7854e-01 1.5066e-01 insignificant 1.00000000 1.0000000 insignificant -0.0289924 0.03700531 weaklyHypometh 1.000000 insignificant 0.863675 0.809259 0.0543515 7 0.867583 0.816728 0.05085510 2.0460e-03 9.9849e-01 weaklyHypermeth 3.2789e-02 1.0000e+00 weaklyHypermeth 1.4456e-03 9.9787e-01 weaklyHypermeth 4.1302e-02 1.0000000 weaklyHypermeth 0.05760245 6.9995e-02 insignificant 1.0000e+00 insignificant 0.863675 0.891379 -0.00170328 7 0.867583 0.876421 -0.0088374 3.9704e-01 3.7575e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0631301 7.4637e-01 insignificant 1.00000 1.0000000 insignificant -0.01118899 0.52907840 insignificant 1.00000 insignificant 0.809259 0.891379 -0.0562228 7 0.816728 0.876421 -0.0596925 9.9986e-01 6.3174e-03 weaklyHypometh 1.00000000 1.2300e-01 insignificant 0.99985517 1.3183e-02 weaklyHypometh 1.00000 3.3802e-01 insignificant -0.06879144 3.1621e-02 weaklyHypometh 6.9599e-01 insignificant chr1 158611601 158612601 3213 NHLH1 ENSG00000171786 0.080433 111 4 0.0566576 238 5 0.078754 199 5 0.0536364 106 3 0.1214894 177 5 0.275646 236 5 0.083973 191 5 0.059266 176 5 0.057898 176 5 0.013095 233 5 0.1764848 236 5 0.157619 133 5 0.013043 193 5 0.032444 75 3 0.0215429 259 5 0.093927 169 5 0.477926 94 3 0.245709 104 4 0.022996 207 4 0.060230 212 5 0.311758 97 5 0.127604 123 3 0.151111 133 4 0.054101 135 5 0.360784 94 2 0.012632 234 5 0.0900240 191 4 0.1102222 124 4 0.071877 165 4 0.013888 311 5 0.077361 200 5 0.103008 205 5 0.075403 219 5 0.0081633 86 4 0.268170 376 4 0.500000 10 1 0.274939 223 5 0.075580 187 5 0.018615 144 4 0.070887 118 4 0.0495726 72 3 0.0322581 62 3 0.1161111 115 3 0.1160208 0.0494878 0.078143 0.063034 0.053623 0.2278018 0.070956 0.0653831 0.046298 0.031230 0.1432935 0.047234 0.042383 0.028156 0.025222 0.057335 0.3692372 0.1459991 0.0233198 0.1043246 0.291610 0.3317031 0.091468 0.095142 0.513982 0.041044 0.1886621 0.071088 0.093277 0.0035128 0.060030 0.1031369 0.034040 0.02652520 0.20944353 0.338416 0.1191430 0.0798235 0.0155649 0.074843 0.053776 0.083854 0.1680224 3 0.083688 0.133698 -0.05393604 5 0.080846 0.084220 -0.0033734 0.3424589 3.9758e-01 insignificant 1 1.0000e+00 insignificant 0.333638 3.6717e-01 insignificant 1 1.0000000 insignificant -0.01455915 0.720286 lowCoverage 1 lowCoverage 0.0838068 0.139873 -0.07189886 5 0.097016 0.157836 -0.06082028 6.1550e-01 9.7285e-03 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 3.3854e-01 2.6398e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.09123748 2.9092e-01 lowCoverage 1.0000e+00 lowCoverage 0.0838068 0.074364 0.0038081 4 0.097016 0.055769 0.0412466 2.5208e-01 7.3966e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 7.3551e-02 6.8196e-01 lowCoverage 1.00000000 1.0000000 lowCoverage 0.0516496 0.10657503 lowCoverage 1.000000 lowCoverage 0.133764 0.139873 -0.0080886 5 0.101064 0.157836 -0.05677222 7.5755e-01 3.4706e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 4.4098e-01 2.8609e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.07667833 3.7669e-01 lowCoverage 1.0000e+00 lowCoverage 0.133764 0.074364 0.06459211 4 0.101064 0.055769 0.0452946 2.6973e-01 9.1814e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0731029 2.5206e-01 lowCoverage 1.00000 1.0000000 lowCoverage 0.06620876 0.08220566 lowCoverage 1.00000 lowCoverage 0.139873 0.074364 0.0503828 4 0.157836 0.055769 0.1020669 1.2766e-01 7.4651e-01 lowCoverage 1.00000000 1.0000e+00 lowCoverage 0.23574509 6.4008e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.14288709 1.1633e-01 lowCoverage 1.0000e+00 lowCoverage chr1 159249401 159250401 3232 ITLN2 ENSG00000158764 0.701966 140 4 0.3310123 142 6 0.508962 156 6 0.5472521 174 4 0.4269595 96 6 0.631227 265 5 0.654691 107 6 0.673486 150 6 0.684807 66 4 0.589870 96 4 0.6551947 250 7 0.339116 76 4 0.816163 151 4 0.540909 80 4 0.6400311 154 4 0.552956 93 3 NA 0 0 0.601172 226 4 0.883220 266 6 0.832795 251 6 0.414380 82 6 0.750000 4 0 0.561078 116 6 0.384201 96 6 0.691429 69 2 0.599570 224 6 0.5001439 266 6 0.2244404 59 6 0.665933 245 4 0.516432 235 7 0.722605 210 6 0.581351 256 6 0.500141 207 7 0.3383986 256 4 0.703998 310 6 0.500000 43 1 0.395238 142 7 0.485291 372 6 0.739975 193 6 0.740820 248 6 0.7670010 153 4 0.7051768 163 4 0.8163952 190 4 0.6341577 0.2674877 0.584754 0.624453 0.498397 0.6262643 0.652059 0.7511667 0.550811 0.646148 0.7264908 0.327924 0.723867 0.540119 0.532827 0.413887 NA 0.5769983 0.9038260 0.8524925 0.353053 0.6992239 0.576334 0.665986 0.836335 0.541848 0.4454519 0.209696 0.567492 0.4637027 0.630462 0.6142122 0.315146 0.43673784 0.76748058 0.470483 0.2108696 0.2937795 0.7485711 0.686415 0.693347 0.534153 0.7173844 4 0.647159 0.549812 0.09007457 5 0.547076 0.513893 0.0331834 0.0011899 8.9037e-01 weaklyHypermeth 1 1.0000e+00 insignificant 0.031381 9.7091e-01 weaklyHypermeth 1 1.0000000 insignificant 0.06018318 0.294737 lowCoverage 1 lowCoverage 0.6473792 0.482707 0.18297995 5 0.625230 0.518547 0.10668285 3.4451e-04 9.0561e-01 weaklyHypermeth 6.5001e-03 1.0000e+00 weaklyHypermeth 3.1597e-03 9.6646e-01 weaklyHypermeth 8.1019e-02 1.0000e+00 weaklyHypermeth 0.12396899 7.1007e-02 lowCoverage 1.0000e+00 lowCoverage 0.6471589 0.712924 -0.0475944 5 0.547076 0.715709 -0.1686334 9.9635e-01 6.9732e-02 insignificant 1.0000e+00 1.00000000 insignificant 9.9979e-01 1.4997e-02 weaklyHypometh 1.00000000 1.0000000 insignificant -0.1427268 0.00133149 lowCoverage 0.133149 lowCoverage 0.550162 0.482707 0.0838016 6 0.539687 0.518547 0.02113989 1.6179e-01 7.6192e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.2285e-01 7.3970e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.06378580 3.6431e-01 insignificant 1.0000e+00 insignificant 0.550296 0.713833 -0.13706092 5 0.567904 0.747297 -0.1793927 9.9999e-01 8.2659e-05 weaklyHypometh 1.0000e+00 2.0665e-02 weaklyHypometh 0.9999910 5.8533e-03 weaklyHypometh 1.00000 0.9755561 insignificant -0.20290998 0.00088502 lowCoverage 0.29501 lowCoverage 0.482707 0.713376 -0.2275400 5 0.518547 0.746525 -0.2279782 9.9979e-01 1.9867e-04 hypomethylated 1.00000000 5.8434e-03 hypomethylated 0.99998941 5.2726e-04 hypomethylated 1.00000 2.1091e-02 hypomethylated -0.26669578 2.3544e-03 lowCoverage 1.0702e-01 lowCoverage chr1 159656901 159657901 3240 ENSG00000208455 0.272169 665 14 0.2409013 407 14 0.326359 383 14 0.3006915 665 14 0.3084148 245 14 0.273832 703 14 0.210701 445 14 0.314943 420 14 0.276592 400 14 0.269542 366 13 0.2660822 648 14 0.175469 241 8 0.410568 304 13 0.546071 78 8 0.4382465 315 8 0.266544 194 8 0.185676 278 5 0.320644 431 14 0.257483 242 14 0.261692 555 14 0.258596 103 8 0.290694 181 5 0.282392 368 14 0.331508 170 11 0.277533 118 11 0.355592 664 14 0.3463558 132 9 0.3671875 64 6 0.286436 354 10 0.391187 620 14 0.374121 617 14 0.286943 689 14 0.568157 443 13 0.4726735 233 14 0.554572 524 14 0.235714 85 9 0.548673 180 10 0.517264 655 14 0.351498 807 14 0.343343 495 14 0.2319158 724 14 0.3159217 698 13 0.3647171 452 14 0.2103847 0.1692703 0.214482 0.170933 0.193745 0.2692756 0.140044 0.2293003 0.182109 0.162800 0.1519831 0.136223 0.229364 0.333510 0.216079 0.260731 0.2737586 0.2286363 0.1331936 0.2302963 0.193208 0.2063236 0.197580 0.217687 0.224358 0.171538 0.1704525 0.209783 0.246526 0.3505158 0.264340 0.1877706 0.444185 0.39458895 0.78414154 0.227574 0.6699124 0.3494911 0.3188301 0.197273 0.138003 0.174588 0.2035786 5 0.219537 0.271078 -0.02637128 14 0.252004 0.299041 -0.0470370 0.9996350 1.9318e-03 weaklyHypometh 1 4.8296e-01 insignificant 0.994985 6.9881e-02 insignificant 1 1.0000000 insignificant -0.02458100 0.299561 insignificant 1 insignificant 0.2195916 0.508019 -0.26901135 14 0.267754 0.484239 -0.21648455 9.9169e-01 2.7730e-26 hypomethylated 1.0000e+00 2.7730e-23 hypomethylated 9.9398e-01 1.2271e-09 hypomethylated 1.0000e+00 1.2271e-06 hypomethylated -0.18671149 1.2825e-02 weaklyHypometh 3.2884e-01 insignificant 0.2196191 0.242128 -0.0096773 14 0.285605 0.342152 -0.0565470 9.1538e-01 5.6730e-02 insignificant 1.0000e+00 1.00000000 insignificant 8.8559e-01 1.3751e-01 insignificant 1.00000000 1.0000000 insignificant -0.0253481 0.42689849 insignificant 1.000000 insignificant 0.271211 0.508019 -0.2423372 14 0.317731 0.484239 -0.16650778 8.9218e-01 1.8274e-12 hypomethylated 1.0000e+00 1.8274e-09 hypomethylated 5.5755e-01 2.8790e-06 hypomethylated 1.0000e+00 0.0028790 hypomethylated -0.16213049 2.3973e-02 weaklyHypometh 5.8472e-01 insignificant 0.271278 0.242128 0.01532829 14 0.338913 0.342152 -0.0032385 2.1596e-01 6.7217e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.2705499 6.7523e-01 insignificant 1.00000 1.0000000 insignificant -0.00076708 0.97826439 insignificant 1.00000 insignificant 0.508259 0.242128 0.2566838 14 0.516522 0.342152 0.1743698 8.6715e-07 9.9115e-01 hypermethylated 0.00086715 1.0000e+00 hypermethylated 0.00059778 9.8224e-01 hypermethylated 0.59778 1.0000e+00 insignificant 0.16136341 2.4741e-02 weaklyHypermeth 6.3424e-01 insignificant chr1 159737719 159738719 3242 ENSG00000208455 0.750314 259 10 0.8166641 163 8 0.827259 153 8 0.6824694 152 8 0.7904078 95 10 0.848995 252 10 0.617708 107 9 0.686147 105 9 0.839961 128 8 0.838149 130 8 0.8344512 210 10 0.849246 69 8 0.769347 123 8 0.742857 38 2 0.7988514 165 10 0.663492 61 8 0.794444 51 6 0.810705 163 8 0.786694 183 8 0.748634 244 10 0.920346 49 5 0.859946 115 9 0.650238 186 10 0.774196 79 6 0.803173 77 8 0.796042 219 10 0.7682838 104 5 0.8199134 47 5 0.728312 133 7 0.734298 172 10 0.718193 165 10 0.754448 349 10 0.617848 111 7 0.6583765 136 8 0.772272 189 8 0.744760 91 7 0.773305 55 4 0.708433 237 10 0.846380 269 8 0.688228 304 10 0.8451788 200 10 0.6779436 302 8 0.7960590 203 10 0.8169823 0.7750386 0.844047 0.789941 0.842504 0.8084878 0.735929 0.7619048 0.840140 0.816572 0.8429718 0.832498 0.786428 0.734154 0.817563 0.725862 0.8072111 0.8072937 0.8433522 0.7982812 0.947368 0.8643636 0.773204 0.878232 0.830402 0.814556 0.7991214 0.856158 0.803327 0.8296139 0.805395 0.8043490 0.639870 0.72334639 0.75735394 0.710029 0.7885944 0.7320739 0.8549931 0.862331 0.853243 0.784050 0.8421857 5 0.796212 0.807670 -0.01371809 9 0.791692 0.709751 0.0819410 0.4359752 3.8385e-01 insignificant 1 1.0000e+00 insignificant 0.620150 5.8106e-02 insignificant 1 1.0000000 insignificant -0.00244279 0.923912 insignificant 1 insignificant 0.7958392 0.730159 0.06412692 9 0.771245 0.711159 0.06008602 2.5677e-04 9.9659e-01 weaklyHypermeth 5.0347e-03 1.0000e+00 weaklyHypermeth 6.1100e-04 9.9522e-01 weaklyHypermeth 1.7457e-02 1.0000e+00 weaklyHypermeth 0.06234084 6.8656e-02 insignificant 1.0000e+00 insignificant 0.7962119 0.832551 -0.0362513 9 0.791692 0.747381 0.0443108 8.4421e-01 1.7476e-01 insignificant 1.0000e+00 1.00000000 insignificant 9.2332e-01 1.1518e-01 insignificant 1.00000000 1.0000000 insignificant 0.0040818 0.92220691 insignificant 1.000000 insignificant 0.809750 0.730159 0.0790206 9 0.762411 0.711159 0.05125201 1.6446e-06 9.9674e-01 weaklyHypermeth 5.3052e-05 1.0000e+00 weaklyHypermeth 3.8285e-05 9.9969e-01 weaklyHypermeth 1.7402e-03 1.0000000 weaklyHypermeth 0.06478363 7.4976e-02 insignificant 1.0000e+00 insignificant 0.807670 0.832551 -0.02031839 9 0.709751 0.747381 -0.0376302 9.6306e-01 3.4591e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.8193656 5.8635e-01 insignificant 1.00000 1.0000000 insignificant 0.00652461 0.88174112 insignificant 1.00000 insignificant 0.730159 0.833464 -0.0992107 9 0.711159 0.769395 -0.0582359 9.9911e-01 4.4773e-06 weaklyHypometh 1.00000000 2.0351e-04 weaklyHypometh 0.99367707 1.3051e-03 weaklyHypometh 1.00000 4.3504e-02 weaklyHypometh -0.05825903 2.3561e-01 insignificant 1.0000e+00 insignificant chr1 162883516 162884516 3316 ENSG00000207082 0.735081 332 10 0.6349934 174 8 0.625435 119 8 0.6840233 283 9 0.6475152 100 8 0.724150 221 8 0.678074 142 10 0.537976 136 10 0.636606 103 9 0.820844 108 8 0.7847579 239 10 0.732757 72 6 0.688205 107 9 0.746528 46 4 0.8451154 123 7 0.731663 87 6 0.625000 51 6 0.676005 195 8 0.726477 139 9 0.637407 189 8 0.645455 38 4 0.813972 38 2 0.711008 176 10 0.725884 47 6 0.759740 32 3 0.710182 200 8 0.7581791 71 6 0.8458333 47 3 0.693327 117 9 0.777450 172 8 0.690791 148 8 0.684091 247 9 0.591183 102 7 0.5580251 99 9 0.588200 143 7 0.788194 43 4 0.653153 97 7 0.731530 165 8 0.681425 374 9 0.732671 269 10 0.7467571 308 10 0.7515544 238 9 0.7327196 323 10 0.8086105 0.7008139 0.758451 0.857120 0.781937 0.8227548 0.805392 0.7074485 0.659848 0.893459 0.8104553 0.683677 0.781774 0.799923 0.837079 0.859457 0.6591658 0.8008136 0.8397088 0.7699998 0.796138 0.8641788 0.801390 0.738425 0.778256 0.806794 0.8277196 0.695039 0.817649 0.7698657 0.787582 0.7683457 0.691811 0.62865777 0.68490916 0.827889 0.7723447 0.7877491 0.8028102 0.819050 0.814919 0.810693 0.8211997 3 0.759447 0.755823 0.01714241 8 0.741933 0.747385 -0.0054519 0.2213705 8.1483e-01 insignificant 1 1.0000e+00 insignificant 0.318766 6.2541e-01 insignificant 1 1.0000000 insignificant -0.03872866 0.110576 insignificant 1 insignificant 0.7593655 0.674884 0.08725753 8 0.718473 0.660847 0.05762570 5.9282e-05 9.9419e-01 weaklyHypermeth 1.3473e-03 1.0000e+00 weaklyHypermeth 2.3342e-02 9.7291e-01 weaklyHypermeth 4.1683e-01 1.0000e+00 insignificant 0.04421646 3.1252e-01 insignificant 1.0000e+00 insignificant 0.7588533 0.774471 -0.0108622 9 0.658600 0.751409 -0.0928090 9.2971e-02 2.6250e-01 insignificant 1.0000e+00 1.00000000 insignificant 3.2818e-01 2.0971e-01 insignificant 1.00000000 1.0000000 insignificant -0.0330948 0.12631847 insignificant 1.000000 insignificant 0.755455 0.674884 0.0681498 8 0.724420 0.660847 0.06357318 5.2409e-04 9.8966e-01 weaklyHypermeth 1.0696e-02 1.0000e+00 weaklyHypermeth 7.2653e-02 9.9770e-01 insignificant 9.9525e-01 1.0000000 insignificant 0.08294512 8.0860e-02 insignificant 1.0000e+00 insignificant 0.755455 0.774322 -0.01517287 8 0.724420 0.728810 -0.0043897 4.3628e-01 9.5558e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 0.7262812 3.9073e-01 insignificant 1.00000 1.0000000 insignificant 0.00563391 0.79122054 insignificant 1.00000 insignificant 0.674884 0.774322 -0.0882965 8 0.660847 0.728810 -0.0679628 9.9265e-01 2.3262e-03 weaklyHypometh 1.00000000 5.1693e-02 weaklyHypometh 0.99776388 3.1334e-02 weaklyHypometh 1.00000 6.2667e-01 insignificant -0.07731121 9.5456e-02 insignificant 1.0000e+00 insignificant chr1 162947716 162948716 3321 ENSG00000208426 0.864097 703 6 0.6397161 515 7 0.859498 154 6 0.7424926 514 6 0.7058647 128 6 0.800646 716 6 0.671321 208 6 0.763738 193 6 0.866906 202 6 0.934435 100 2 0.7124284 361 6 0.780299 104 2 0.943388 118 6 0.821347 131 6 0.7941229 157 6 0.975152 137 6 0.750000 8 0 0.841206 684 6 0.961764 358 6 0.759823 538 6 0.897138 75 6 0.489011 62 2 0.770656 284 6 0.632739 121 6 0.945739 281 6 0.879841 412 6 0.7718011 205 6 0.7849174 100 6 0.899072 340 6 0.911462 492 6 0.925875 499 6 0.899569 479 6 0.714432 360 6 0.4584186 138 6 0.694192 497 7 0.855856 193 6 0.472477 338 6 0.976814 417 6 0.754281 417 6 0.807598 367 6 0.6519556 581 6 0.5592424 199 6 0.6862933 430 6 0.8268372 0.6371367 0.890826 0.804710 0.795682 0.7490709 0.819381 0.8446913 0.835422 0.832196 0.8318839 0.711305 0.869403 0.825055 0.921653 0.938222 0.7757054 0.8118412 0.9203229 0.8489831 0.798281 0.4569455 0.728179 0.773889 0.895667 0.824300 0.7325614 0.877021 0.807933 0.8629401 0.892482 0.8827540 0.803831 0.36020348 0.82921246 0.946545 0.4735901 0.9594491 0.7126849 0.774233 0.657991 0.463288 0.6694740 6 0.821304 0.861070 -0.03896390 6 0.754013 0.846425 -0.0924114 0.9944155 7.5763e-05 weaklyHypometh 1 2.5254e-02 weaklyHypometh 0.937452 4.1167e-01 insignificant 1 1.0000000 insignificant -0.00790619 0.863012 insignificant 1 insignificant 0.8213041 0.696189 0.12848232 6 0.754013 0.701897 0.05211646 6.3185e-05 9.7822e-01 weaklyHypermeth 1.4041e-03 1.0000e+00 weaklyHypermeth 2.8289e-03 7.9828e-01 weaklyHypermeth 7.4444e-02 1.0000e+00 weaklyHypermeth 0.11404720 2.3861e-01 insignificant 1.0000e+00 insignificant 0.8223739 0.685557 0.1371930 6 0.827573 0.694903 0.1326704 2.4437e-10 1.0000e+00 weaklyHypermeth 1.2219e-07 1.00000000 weaklyHypermeth 2.5933e-07 1.0000e+00 weaklyHypermeth 0.00025933 1.0000000 weaklyHypermeth 0.1175382 0.04799920 weaklyHypermeth 1.000000 insignificant 0.860299 0.696346 0.1670085 6 0.752377 0.735019 0.01735807 3.2420e-05 9.9498e-01 weaklyHypermeth 9.2627e-04 1.0000e+00 weaklyHypermeth 8.1967e-02 9.6120e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.12195339 2.2853e-01 insignificant 1.0000e+00 insignificant 0.861253 0.685557 0.17297530 6 0.874598 0.694903 0.1796950 7.7677e-13 1.0000e+00 weaklyHypermeth 3.8838e-10 1.0000e+00 weaklyHypermeth 0.0000905 1.0000e+00 weaklyHypermeth 0.04525 1.0000000 weaklyHypermeth 0.12544439 0.05471009 insignificant 1.00000 insignificant 0.686869 0.685557 -0.0045661 6 0.685862 0.694903 -0.0090405 4.7634e-01 5.0311e-01 insignificant 1.00000000 1.0000e+00 insignificant 0.61104078 4.8234e-01 insignificant 1.00000 1.0000e+00 insignificant 0.00349100 9.7141e-01 insignificant 1.0000e+00 insignificant chr1 164118216 164119216 3349 UCK2 ENSG00000143179 0.674667 336 6 0.5544984 240 6 0.646210 176 6 0.7300864 259 6 0.6209118 135 6 0.676006 349 6 0.687856 230 6 0.668677 126 6 0.631258 118 6 0.647738 109 6 0.6381379 272 6 0.640013 103 6 0.659886 226 6 0.597685 42 6 0.6304539 143 6 0.602953 80 6 0.626477 124 6 0.679725 298 6 0.735178 146 6 0.666427 275 6 0.655563 87 6 0.665316 86 6 0.658532 193 6 0.631019 82 6 0.777299 101 4 0.638627 175 6 0.5932628 115 6 0.6527778 75 6 0.644162 162 6 0.626523 210 6 0.639787 252 6 0.653523 416 6 0.580961 221 6 0.5152231 136 6 0.556566 148 6 0.708333 69 5 0.610474 137 6 0.609700 183 6 0.671346 289 6 0.685068 303 6 0.6985646 267 6 0.6899234 263 6 0.6933363 280 6 0.6714667 0.5851918 0.644932 0.746892 0.604971 0.6845472 0.693134 0.6452601 0.649317 0.665133 0.6553383 0.637333 0.666828 0.577550 0.623714 0.597833 0.6502592 0.6838102 0.7239648 0.6565623 0.625175 0.6641462 0.667416 0.648159 0.763222 0.640546 0.5675003 0.643059 0.671400 0.6633540 0.662819 0.6363748 0.578823 0.49830820 0.53590437 0.708294 0.6161717 0.6118865 0.6626007 0.676578 0.705571 0.703123 0.6819341 5 0.658305 0.665302 0.00732770 6 0.657946 0.652976 0.0049700 0.4580836 7.5549e-01 insignificant 1 1.0000e+00 insignificant 0.573187 5.9977e-01 insignificant 1 1.0000000 insignificant -0.00229030 0.885777 insignificant 1 insignificant 0.6583047 0.585011 0.07935179 6 0.657946 0.590230 0.06771653 1.0784e-05 9.9734e-01 weaklyHypermeth 2.6960e-04 1.0000e+00 weaklyHypermeth 5.1831e-03 9.6574e-01 weaklyHypermeth 1.1518e-01 1.0000e+00 insignificant 0.05386603 1.0319e-01 insignificant 1.0000e+00 insignificant 0.6583047 0.665478 -0.0209975 6 0.657946 0.685087 -0.0271408 9.4030e-01 4.6525e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant 9.8032e-01 2.5031e-02 weaklyHypometh 1.00000000 1.0000000 insignificant -0.0369055 0.00199993 weaklyHypometh 0.142852 insignificant 0.665302 0.585011 0.0713863 6 0.652976 0.590230 0.06274649 1.9912e-04 9.6015e-01 weaklyHypermeth 4.7409e-03 1.0000e+00 weaklyHypermeth 4.3771e-03 9.6994e-01 weaklyHypermeth 1.0676e-01 1.0000000 insignificant 0.05615633 9.6659e-02 insignificant 1.0000e+00 insignificant 0.665302 0.665478 -0.02723094 6 0.652976 0.685087 -0.0321108 9.9057e-01 9.1497e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 0.9942219 9.9559e-02 insignificant 1.00000 1.0000000 insignificant -0.03461522 0.02212513 weaklyHypometh 1.00000 insignificant 0.585011 0.665478 -0.0975043 6 0.590230 0.685087 -0.0948573 9.9825e-01 6.4920e-05 weaklyHypometh 1.00000000 2.3186e-03 weaklyHypometh 0.99856531 3.5541e-04 weaklyHypometh 1.00000 1.6155e-02 weaklyHypometh -0.09077156 1.8497e-02 weaklyHypometh 5.6052e-01 insignificant chr1 165356316 165357316 3357 DUSP27 ENSG00000198842 0.114378 444 10 0.0434292 269 10 0.072613 261 10 0.0693678 235 10 0.1458053 129 10 0.103823 512 10 0.031094 220 10 0.067498 305 10 0.115353 236 10 0.059253 200 10 0.0891811 405 10 0.080280 235 10 0.109266 276 10 0.071970 75 6 0.0868897 272 10 0.089275 231 10 0.013636 108 5 0.174003 261 10 0.021754 189 7 0.132700 464 10 0.194834 96 7 0.128236 252 10 0.132375 287 10 0.026786 178 10 0.484738 129 10 0.239400 324 10 0.0464124 225 10 0.0810457 139 12 0.026275 151 7 0.053658 452 10 0.312414 241 10 0.092165 635 10 0.025143 219 10 0.0281981 165 10 0.361111 32 2 0.015406 102 5 0.019583 196 10 0.103030 280 10 0.110191 343 7 0.131701 413 7 0.0085176 256 7 0.1147744 359 7 0.0968506 360 10 0.1125637 0.0351181 0.084165 0.059439 0.105372 0.1006778 0.024236 0.0675579 0.092868 0.030977 0.0870968 0.067326 0.107449 0.066222 0.070465 0.073661 0.0340426 0.1367969 0.0264716 0.1291964 0.115004 0.0204963 0.091895 0.038726 0.472107 0.239376 0.0444935 0.106989 0.030150 0.0505521 0.271267 0.0884204 0.029046 0.03242608 NA 0.028707 0.0319615 0.0048857 0.1031853 0.080765 0.014023 0.115067 0.0705160 7 0.088075 0.121975 -0.03281305 10 0.077965 0.126711 -0.0487469 0.9999697 3.3308e-02 weaklyHypometh 1 1.0000e+00 insignificant 0.999829 2.4973e-01 insignificant 1 1.0000000 insignificant -0.06694972 0.125688 insignificant 1 insignificant 0.0880420 0.036327 0.05252927 10 0.071967 0.024762 0.04720567 8.7868e-07 1.0000e+00 weaklyHypermeth 2.5844e-05 1.0000e+00 weaklyHypermeth 6.7468e-06 1.0000e+00 weaklyHypermeth 3.7482e-04 1.0000e+00 weaklyHypermeth -0.00750013 8.9876e-01 insignificant 1.0000e+00 insignificant 0.0880751 0.089544 0.0011043 7 0.077965 0.080318 -0.0023533 1.8081e-01 4.8850e-01 insignificant 1.0000e+00 1.00000000 insignificant 4.6992e-01 7.6749e-01 insignificant 1.00000000 1.0000000 insignificant -0.0078284 0.75190819 insignificant 1.000000 insignificant 0.122022 0.037261 0.0853485 10 0.127953 0.050403 0.07755076 1.6455e-04 1.0000e+00 weaklyHypermeth 4.0135e-03 1.0000e+00 weaklyHypermeth 6.4518e-06 1.0000e+00 weaklyHypermeth 3.7952e-04 1.0000000 weaklyHypermeth 0.05944959 4.0320e-01 insignificant 1.0000e+00 insignificant 0.121809 0.089647 0.03027203 7 0.115503 0.087619 0.0278839 1.1088e-01 9.6180e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.2585449 9.8709e-01 insignificant 1.00000 1.0000000 insignificant 0.05912129 0.21090916 insignificant 1.00000 insignificant 0.036400 0.089544 -0.0427025 7 0.026825 0.080318 -0.0534928 1.0000e+00 2.1077e-03 weaklyHypometh 1.00000000 4.9017e-02 weaklyHypometh 0.99999997 2.1813e-02 weaklyHypometh 1.00000 4.7420e-01 insignificant -0.00032830 9.9577e-01 insignificant 1.0000e+00 insignificant chr1 166537016 166538016 3403 TBX19 ENSG00000143178 0.773606 232 6 0.6197220 112 6 0.739907 109 6 0.7370966 162 6 0.7228602 112 6 0.777289 379 6 0.720160 116 6 0.843155 123 6 0.754902 107 6 0.770537 90 6 0.7075174 198 6 0.811905 71 6 0.702754 132 6 0.811111 41 4 0.7347411 109 6 0.850358 49 1 0.608392 39 3 0.746627 118 6 0.813402 86 6 0.737091 261 6 0.863551 67 5 0.739000 113 6 0.761163 152 6 0.614468 97 6 0.716769 65 6 0.730708 176 6 0.6738792 136 6 0.6548886 85 6 0.911433 98 6 0.730160 165 6 0.766282 153 6 0.763738 382 6 0.663432 135 6 0.7238375 98 6 0.713222 169 6 0.758730 54 3 0.654860 94 6 0.713022 146 6 0.820629 229 6 0.836660 227 6 0.7690100 143 6 0.8454066 141 6 0.8059170 211 6 0.8301487 0.7218484 0.780825 0.800863 0.791944 0.8192251 0.771627 0.8667382 0.761793 0.842891 0.7718440 0.855288 0.790592 0.856763 0.778057 0.873569 0.7208549 0.7949443 0.8523166 0.8153341 0.904868 0.8191457 0.810640 0.731219 0.771159 0.785024 0.7520870 0.744770 0.917953 0.8030865 0.829095 0.8051812 0.696398 0.78613227 0.75373830 0.813923 0.7265864 0.7883283 0.8632814 0.884621 0.832441 0.892462 0.8796246 6 0.797808 0.804618 -0.00222545 6 0.752190 0.750232 0.0019575 0.6449151 5.3891e-01 insignificant 1 1.0000e+00 insignificant 0.437887 5.5185e-01 insignificant 1 1.0000000 insignificant 0.00532004 0.849168 insignificant 1 insignificant 0.7978080 0.738506 0.04676408 6 0.752190 0.701930 0.05025990 1.3529e-02 9.9738e-01 weaklyHypermeth 1.8282e-01 1.0000e+00 insignificant 3.0992e-02 9.9135e-01 weaklyHypermeth 5.2528e-01 1.0000e+00 insignificant 0.04463944 5.4896e-02 insignificant 1.0000e+00 insignificant 0.7978080 0.862250 -0.0612980 6 0.752190 0.810300 -0.0581100 9.9834e-01 3.6370e-04 weaklyHypometh 1.0000e+00 0.07273915 weaklyHypometh 9.9931e-01 1.0832e-03 weaklyHypometh 1.00000000 0.2166388 insignificant -0.0663679 0.00424748 weaklyHypometh 0.235971 insignificant 0.804618 0.738506 0.0481742 6 0.750232 0.701930 0.04830241 3.0811e-02 9.9767e-01 weaklyHypermeth 3.9502e-01 1.0000e+00 insignificant 1.1134e-01 9.8293e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.03931939 1.8777e-01 insignificant 1.0000e+00 insignificant 0.804618 0.862250 -0.05825362 6 0.750232 0.810300 -0.0600675 9.9973e-01 2.8320e-03 weaklyHypometh 1.0000e+00 4.7200e-01 insignificant 0.9999354 3.0200e-03 weaklyHypometh 1.00000 0.9755561 insignificant -0.07168794 0.01901907 weaklyHypometh 1.00000 insignificant 0.738506 0.862250 -0.1067456 6 0.701930 0.810300 -0.1083699 1.0000e+00 4.4617e-05 weaklyHypometh 1.00000000 1.6525e-03 weaklyHypometh 0.99999608 4.0143e-04 weaklyHypometh 1.00000 1.7453e-02 weaklyHypometh -0.11100734 4.8417e-04 weaklyHypometh 4.4015e-02 weaklyHypometh chr1 167546616 167547616 3443 ATP1B1 ENSG00000143153 0.811419 71 6 0.5186508 92 6 0.625000 26 1 0.6777360 47 5 0.9047619 42 5 0.706019 59 6 0.673469 24 2 0.778236 78 6 0.796296 37 5 0.834596 57 5 0.8976446 116 6 0.444444 12 0 0.808598 55 6 0.790741 50 5 0.7248677 39 5 0.500000 10 0 NA 0 0 0.840576 65 6 0.652381 50 5 0.816667 36 6 0.682540 25 2 1.000000 7 0 0.712963 31 2 0.717593 45 5 0.630612 38 5 0.831481 66 6 0.9320175 35 1 0.1666667 6 0 0.670330 41 5 0.761333 84 6 0.679276 47 5 0.736111 58 5 0.773469 51 6 0.7870370 42 4 0.678571 100 6 1.000000 1 0 0.662037 31 2 0.836946 81 6 0.752381 40 6 0.808939 51 5 0.7703704 41 6 0.8333333 10 0 0.7664587 63 5 0.7317119 0.4766340 0.563725 0.589636 0.848739 0.6475490 0.563025 0.7861991 0.718954 0.815062 0.8227296 0.372549 0.803221 0.843137 0.682540 0.558824 NA 0.8497738 0.5983193 0.7823529 0.725490 0.9223089 0.676471 0.848039 0.737815 0.828105 0.9094427 0.331958 0.556561 0.6742167 0.686533 0.7009804 0.684874 0.77450980 0.75000000 NA 0.5898693 0.7702483 0.7042017 0.772059 0.847059 0.823529 0.7238859 0 0.748447 0.737060 0.00756318 6 0.797899 0.679006 0.1188929 0.7052909 9.7274e-01 insignificant 1 1.0000e+00 insignificant 0.742215 8.1005e-01 insignificant 1 1.0000000 insignificant 0.01634950 0.807808 lowCoverage 1 lowCoverage 0.7489627 0.758170 -0.01564076 6 0.830999 0.789200 0.04179903 8.7726e-01 7.0020e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.8205e-01 8.0510e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.06325034 3.0847e-01 lowCoverage 1.0000e+00 lowCoverage 0.7489627 0.814634 -0.0483124 5 0.830999 0.755567 0.0754319 9.9950e-01 4.6637e-01 insignificant 1.0000e+00 1.00000000 insignificant 9.6959e-01 5.8768e-01 insignificant 1.00000000 1.0000000 insignificant -0.0598700 0.09100831 lowCoverage 1.000000 lowCoverage 0.736515 0.758170 -0.0236908 6 0.643340 0.789200 -0.14585971 9.7959e-01 6.9257e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6700e-01 7.1894e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.07959984 3.1904e-01 lowCoverage 1.0000e+00 lowCoverage 0.736515 0.814634 -0.05590986 5 0.643340 0.755567 -0.1122269 9.9213e-01 4.5457e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.9908645 7.8689e-01 insignificant 1.00000 1.0000000 insignificant -0.07621946 0.23240396 lowCoverage 1.00000 lowCoverage 0.758170 0.814634 -0.0283025 5 0.789200 0.755567 0.0336328 9.4920e-01 7.6087e-01 insignificant 1.00000000 1.0000e+00 insignificant 0.96316592 8.4602e-01 insignificant 1.00000 1.0000e+00 insignificant 0.00338039 9.5064e-01 lowCoverage 1.0000e+00 lowCoverage chr1 170677516 170678516 3501 C1orf105 ENSG00000180999 0.941036 573 5 0.8928746 318 6 0.941027 64 6 0.9203601 431 6 0.9776786 58 5 0.940898 431 5 0.933329 102 6 0.993333 76 5 0.950617 76 4 0.983529 53 3 0.9223691 234 6 1.000000 21 2 0.934271 70 4 0.916667 33 4 0.9361905 67 4 0.881944 30 2 0.999014 667 3 0.928939 624 5 0.991453 212 5 0.941168 349 5 0.958333 33 3 0.956790 50 2 0.952873 116 5 0.968421 48 3 0.886357 173 5 0.966330 234 5 0.7238095 40 4 0.6952381 40 2 0.908011 238 5 0.951966 268 6 0.965088 272 5 0.925488 339 5 0.767407 183 5 0.9592308 73 5 0.850000 134 4 0.978380 272 4 0.752803 201 6 0.970572 288 6 0.979144 640 5 0.988049 459 5 0.9800403 591 6 0.9298789 555 5 0.9755741 402 5 0.9495488 0.9318329 0.885276 0.941712 0.948713 0.9124073 0.908721 0.9916279 0.937984 0.964432 0.8965721 1.000000 0.936874 0.950904 0.980842 0.883721 0.9954998 0.9424858 0.9701849 0.9331235 0.990310 0.9319552 0.930332 0.906682 0.922720 0.944250 0.9224806 0.972093 0.876673 0.9541254 0.936771 0.9573571 0.904036 0.98783542 0.90077519 0.943292 0.8955965 0.9719714 0.9768583 0.980908 0.975932 0.951744 0.9586469 2 0.945868 0.934524 0.00927257 5 0.932160 0.913420 0.0187404 0.1724805 8.9288e-01 insignificant 1 1.0000e+00 insignificant 0.679113 6.3588e-01 insignificant 1 1.0000000 insignificant 0.04144283 0.169243 lowCoverage 1 lowCoverage 0.9458677 0.917175 0.02803930 5 0.932160 0.916141 0.01601953 3.4369e-01 7.4775e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.7167e-01 6.8542e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.06660285 1.7917e-01 lowCoverage 1.0000e+00 lowCoverage 0.9458677 0.969777 -0.0236526 5 0.932160 0.972009 -0.0398481 9.9486e-01 7.5456e-03 weaklyHypometh 1.0000e+00 0.53896884 insignificant 9.4622e-01 1.1804e-01 insignificant 1.00000000 1.0000000 insignificant -0.0242024 0.09311535 lowCoverage 1.000000 lowCoverage 0.933549 0.913988 0.0128466 5 0.830551 0.785264 0.04528686 5.6849e-01 6.3041e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.1789e-01 8.5428e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.02516002 6.2970e-01 lowCoverage 1.0000e+00 lowCoverage 0.934524 0.969777 -0.03440668 5 0.913420 0.972009 -0.0585885 9.9952e-01 7.4415e-03 weaklyHypometh 1.0000e+00 8.2683e-01 insignificant 0.8022696 3.1774e-01 insignificant 1.00000 1.0000000 insignificant -0.06564519 0.04222139 lowCoverage 1.00000 lowCoverage 0.917175 0.969777 -0.0513708 5 0.916141 0.972009 -0.0558676 9.7035e-01 3.7855e-02 weaklyHypometh 1.00000000 5.2577e-01 insignificant 0.84415850 3.5632e-01 insignificant 1.00000 1.0000e+00 insignificant -0.09080521 8.6069e-02 insignificant 1.0000e+00 insignificant chr1 171169116 171170116 3520 ENSG00000220611 0.797432 187 6 0.5251140 118 6 0.452778 55 6 0.7504845 130 6 0.6674719 93 6 0.634360 91 6 0.669340 92 6 0.655556 92 6 0.625000 44 4 0.684524 48 4 0.7390766 140 6 0.320513 30 2 0.782648 55 6 0.808333 28 4 0.6240741 36 4 0.337500 20 2 0.583333 30 2 0.787452 161 7 0.709184 36 5 0.691186 72 6 0.875000 10 0 NA 0 0 0.798282 140 6 0.675926 45 4 0.522894 42 2 0.772649 136 6 0.6165476 50 4 0.8666667 10 0 0.752681 56 4 0.679809 92 6 0.642177 67 6 0.736111 90 6 0.592778 104 6 0.5640693 70 6 0.414947 87 6 0.375000 8 0 0.620491 64 6 0.592563 105 6 0.818051 216 6 0.782572 213 6 0.8195767 217 6 0.7563238 149 6 0.8481024 199 6 0.7842694 0.4590331 0.428333 0.747126 0.662428 0.7192380 0.677343 0.7361481 0.581667 0.622500 0.7596160 0.375385 0.742208 0.653333 0.501889 0.417829 0.7674952 0.7787771 0.6457143 0.7404261 0.701928 NA 0.770397 0.640000 0.478022 0.720958 0.6506188 0.742599 0.730601 0.7189964 0.743048 0.7851190 0.535067 0.56467532 0.51571429 0.484275 0.5232323 0.6406237 0.7916646 0.754257 0.729620 0.706428 0.8143965 0 0.699615 0.775068 -0.02871819 6 0.693918 0.718623 -0.0247048 0.8499981 1.9910e-01 insignificant 1 1.0000e+00 insignificant 0.729983 1.6705e-02 weaklyHypometh 1 1.0000000 insignificant -0.07943592 0.089667 lowCoverage 1 lowCoverage 0.6998715 0.559361 0.17139802 6 0.721620 0.601462 0.12015852 4.7756e-04 9.9885e-01 weaklyHypermeth 8.8438e-03 1.0000e+00 weaklyHypermeth 4.3471e-02 9.7192e-01 weaklyHypermeth 7.0256e-01 1.0000e+00 insignificant 0.11562673 5.1216e-02 insignificant 1.0000e+00 insignificant 0.6998715 0.787513 -0.0927617 6 0.721620 0.818509 -0.0968886 9.9806e-01 2.7422e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant 9.9698e-01 2.2194e-02 weaklyHypometh 1.00000000 1.0000000 insignificant -0.1626571 0.00012205 weaklyHypometh 0.020342 weaklyHypometh 0.774763 0.559361 0.2020273 6 0.678426 0.601462 0.07696398 6.7166e-05 9.9686e-01 hypermethylated 1.7222e-03 1.0000e+00 hypermethylated 6.6040e-03 9.6652e-01 weaklyHypermeth 1.4675e-01 1.0000000 insignificant 0.19506266 4.0324e-03 lowCoverage 1.3008e-01 lowCoverage 0.774763 0.787513 -0.04976801 6 0.678426 0.818509 -0.1400831 9.0338e-01 9.0296e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 0.6538535 6.9076e-02 insignificant 1.00000 1.0000000 insignificant -0.08322117 0.03744639 lowCoverage 1.00000 lowCoverage 0.559361 0.787513 -0.2517729 6 0.601462 0.818509 -0.2170471 1.0000e+00 2.6949e-05 hypomethylated 1.00000000 1.0780e-03 hypomethylated 0.99999258 1.2471e-03 weaklyHypometh 1.00000 4.3504e-02 weaklyHypometh -0.27828383 7.0212e-04 hypomethylated 5.8510e-02 hypomethylated chr1 172244716 172245716 3545 RC3H1 ENSG00000135870 0.701621 278 7 0.6522676 181 7 0.654308 122 7 0.6905654 180 7 0.7264590 107 6 0.716849 290 7 0.712029 144 7 0.661159 132 7 0.660521 100 6 0.763896 117 7 0.6548365 255 7 0.798496 88 4 0.725644 209 7 0.675926 50 6 0.7445480 103 5 0.497017 63 5 0.608112 101 5 0.733654 225 7 0.744576 122 7 0.669746 257 7 0.627645 51 5 0.730705 53 6 0.695327 151 6 0.761105 93 6 0.764966 58 3 0.694530 176 7 0.7548037 89 5 0.7799953 55 3 0.718821 139 7 0.724421 174 6 0.728440 181 7 0.693518 330 7 0.645349 214 7 0.5904026 146 6 0.716733 106 7 0.612626 62 4 0.732143 93 7 0.703708 174 7 0.776891 205 7 0.760124 217 6 0.7409091 190 7 0.7339082 197 6 0.7208617 185 6 0.7023088 0.6329602 0.624292 0.674030 0.706223 0.6997867 0.703562 0.6203364 0.618841 0.767809 0.6296403 0.772938 0.707282 0.709726 0.725863 0.571412 0.5619930 0.6894465 0.6856482 0.6352405 0.641728 0.7052469 0.663992 0.706395 0.764028 0.682743 0.7110391 0.728520 0.723889 0.6774260 0.703424 0.6737115 0.579776 0.51257023 0.57503001 0.649119 0.6550506 0.6621532 0.7187311 0.718115 0.695585 0.705914 0.6924366 4 0.644046 0.687097 -0.01220464 7 0.694396 0.705450 -0.0110546 0.9443269 3.5449e-01 insignificant 1 1.0000e+00 insignificant 0.978711 1.3050e-01 insignificant 1 1.0000000 insignificant -0.03324487 0.087204 insignificant 1 insignificant 0.6440461 0.607547 0.05271696 7 0.694396 0.675142 0.01925377 1.1113e-03 4.4447e-01 weaklyHypermeth 1.9053e-02 1.0000e+00 weaklyHypermeth 1.3371e-02 3.0490e-01 weaklyHypermeth 2.5713e-01 1.0000e+00 insignificant 0.02278447 4.3777e-01 insignificant 1.0000e+00 insignificant 0.6440461 0.664990 -0.0417974 6 0.694396 0.750643 -0.0562473 9.9963e-01 1.4208e-03 weaklyHypometh 1.0000e+00 0.15657469 insignificant 9.9840e-01 4.4088e-03 weaklyHypometh 1.00000000 0.4408848 insignificant -0.0569274 0.00397643 weaklyHypometh 0.233908 insignificant 0.687097 0.607547 0.0594509 7 0.705450 0.675142 0.03030841 6.6719e-04 5.8434e-01 weaklyHypermeth 1.2831e-02 1.0000e+00 weaklyHypermeth 5.1152e-03 8.1624e-01 weaklyHypermeth 1.1896e-01 1.0000000 insignificant 0.05602934 7.2590e-02 insignificant 1.0000e+00 insignificant 0.687097 0.664990 -0.02956990 6 0.705450 0.750643 -0.0451926 9.8842e-01 1.2597e-02 weaklyHypometh 1.0000e+00 9.6901e-01 insignificant 0.9093257 1.5108e-01 insignificant 1.00000 1.0000000 insignificant -0.02368250 0.15118441 insignificant 1.00000 insignificant 0.607547 0.664990 -0.0987118 6 0.675142 0.750643 -0.0755010 9.9905e-01 1.2016e-04 weaklyHypometh 1.00000000 3.8760e-03 weaklyHypometh 0.99583749 2.2421e-03 weaklyHypometh 1.00000 7.2326e-02 weaklyHypometh -0.07971184 1.9586e-02 weaklyHypometh 5.7605e-01 insignificant chr1 175491516 175492516 3610 ENSG00000222749 0.906333 490 5 0.8223521 379 5 0.661905 54 5 0.9014414 313 5 0.9500000 40 3 0.753852 682 5 0.896700 103 5 0.935673 62 3 0.904412 51 3 0.703704 27 3 0.8658547 239 5 0.780000 27 5 0.851852 27 3 0.925000 28 3 0.9317460 43 3 1.000000 18 3 NA 0 0 0.499318 1077 3 0.798936 236 3 0.844314 347 3 0.900000 32 3 0.666667 3 0 0.941400 205 5 0.588384 48 5 0.879978 132 5 0.928726 249 5 0.9431818 38 3 0.7500000 12 0 0.752501 214 3 0.883612 403 5 0.917459 323 5 0.886229 280 5 0.635902 207 5 0.7500000 160 3 0.769244 233 3 0.666667 12 0 0.622345 158 6 0.662242 319 5 0.949152 495 5 0.895635 352 5 0.8865555 600 5 0.7338548 451 3 0.9216718 414 5 0.8809252 0.7655113 0.714286 0.866039 0.916667 0.8657282 0.827833 0.8927875 0.840686 0.703704 0.8689459 0.800000 0.851852 0.875000 0.931746 1.000000 NA 0.8321975 0.9312059 0.9071899 0.833333 0.6666667 0.902333 0.510101 0.855518 0.950655 0.8863636 1.000000 0.838334 0.9074410 0.943931 0.8474184 0.393169 0.58333333 0.76924413 0.666667 0.6689333 0.6578181 0.9152530 0.846891 0.841229 0.733855 0.8694531 3 0.862362 0.890609 -0.03222293 5 0.727870 0.844767 -0.1168973 0.9936899 5.5646e-03 weaklyHypometh 1 9.2744e-01 insignificant 0.968164 4.1723e-02 weaklyHypometh 1 1.0000000 insignificant 0.00208815 0.962330 lowCoverage 1 lowCoverage 0.8623615 0.651056 0.20584895 5 0.727870 0.634396 0.09347332 2.0075e-13 8.2956e-01 hypermethylated 9.1248e-12 1.0000e+00 hypermethylated 4.0090e-03 6.5039e-01 weaklyHypermeth 9.5452e-02 1.0000e+00 weaklyHypermeth 0.15419952 6.1908e-04 lowCoverage 2.4763e-02 lowCoverage 0.8627682 0.850779 0.0087196 5 0.873444 0.897081 -0.0236377 5.5667e-01 2.7027e-01 insignificant 1.0000e+00 1.00000000 insignificant 6.3588e-01 5.7671e-01 insignificant 1.00000000 1.0000000 insignificant -0.0387741 0.42614828 lowCoverage 1.000000 lowCoverage 0.890609 0.651056 0.2346579 5 0.844767 0.634396 0.21037067 1.8100e-08 9.0361e-01 hypermethylated 6.9615e-07 1.0000e+00 hypermethylated 1.4923e-02 8.6755e-01 weaklyHypermeth 3.0455e-01 1.0000000 insignificant 0.15211137 2.3710e-03 lowCoverage 8.1758e-02 lowCoverage 0.893861 0.850779 0.03756951 5 0.913721 0.897081 0.0166392 2.7585e-01 5.2525e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.2227824 8.9670e-01 insignificant 1.00000 1.0000000 insignificant -0.04086229 0.43742951 lowCoverage 1.00000 lowCoverage 0.654663 0.850779 -0.1967194 5 0.761276 0.897081 -0.1358056 7.9861e-01 1.9853e-04 weaklyHypometh 1.00000000 5.8434e-03 weaklyHypometh 0.70604595 2.0142e-02 weaklyHypometh 1.00000 4.4761e-01 insignificant -0.19297367 3.4112e-03 lowCoverage 1.4213e-01 lowCoverage chr1 177452316 177453316 3639 ENSG00000220511 0.681162 163 5 0.8024238 102 6 0.781102 96 6 0.8762676 132 5 0.7640873 95 6 0.869853 323 6 0.657219 100 5 0.740516 119 6 0.712594 102 5 0.861485 121 6 0.8174697 211 6 0.716435 59 5 0.808570 111 6 0.566667 11 2 0.8719885 154 5 0.828042 36 5 0.815171 63 5 0.834750 151 5 0.838959 168 6 0.821275 210 6 0.766106 57 5 0.874542 76 5 0.863944 161 5 0.694841 69 5 0.666667 44 3 0.860871 189 6 0.7851396 81 6 0.6551160 41 4 0.805392 85 5 0.753706 155 6 0.855996 146 6 0.879070 274 6 0.803780 113 5 0.8248128 75 5 0.570601 85 4 0.826465 55 5 0.813399 78 5 0.850393 173 6 0.885968 151 5 0.918187 208 5 0.8393160 142 5 0.8603186 248 5 0.8052739 182 5 0.8001394 0.8086314 0.760586 0.849489 0.750363 0.8628804 0.736668 0.7142141 0.739904 0.844586 0.8139542 0.788374 0.782779 0.754295 0.862697 0.783593 0.7775475 0.8047503 0.8370394 0.7999785 0.750706 0.8477406 0.847882 0.769438 0.738147 0.841384 0.8073934 0.657522 0.787361 0.7291333 0.827387 0.8493075 0.743764 0.84250991 0.62520893 0.798941 0.8038709 0.8084591 0.8580779 0.904234 0.806559 0.861843 0.8209241 5 0.806490 0.820029 -0.00611333 6 0.808177 0.821815 -0.0136383 0.2485799 1.5725e-01 insignificant 1 1.0000e+00 insignificant 0.562577 2.1215e-01 insignificant 1 1.0000000 insignificant -0.00514750 0.865235 insignificant 1 insignificant 0.8064899 0.746114 0.04463417 5 0.808177 0.795080 0.01309676 4.2934e-02 4.1439e-01 weaklyHypermeth 5.1112e-01 1.0000e+00 insignificant 5.0093e-01 2.4368e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00172692 9.7138e-01 insignificant 1.0000e+00 insignificant 0.8064899 0.872180 -0.0430661 5 0.808177 0.871237 -0.0630604 9.8837e-01 2.9042e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant 9.9918e-01 4.1105e-03 weaklyHypometh 1.00000000 0.4408848 insignificant -0.0785110 0.01186289 weaklyHypometh 0.494287 insignificant 0.820029 0.746114 0.0435565 5 0.821815 0.795080 0.02673501 5.6666e-02 7.7605e-01 insignificant 6.6666e-01 1.0000e+00 insignificant 6.7798e-01 4.0119e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.00687442 8.9146e-01 insignificant 1.0000e+00 insignificant 0.820029 0.872180 -0.03825290 5 0.821815 0.871237 -0.0494222 9.9245e-01 7.4835e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 0.9883795 1.0183e-01 insignificant 1.00000 1.0000000 insignificant -0.07336353 0.03137388 weaklyHypometh 1.00000 insignificant 0.746114 0.872180 -0.0845368 5 0.795080 0.871237 -0.0761572 9.6189e-01 1.3630e-02 weaklyHypometh 1.00000000 2.2887e-01 insignificant 0.78680650 1.5880e-01 insignificant 1.00000 1.0000e+00 insignificant -0.08023795 1.3111e-01 insignificant 1.0000e+00 insignificant chr1 178054116 178055116 3648 FAM163A ENSG00000143340 0.795037 199 7 0.5466959 220 9 0.753050 70 8 0.7844091 175 9 0.7508353 79 9 0.651239 234 9 0.660593 83 6 0.830523 119 7 0.614062 65 5 0.672048 110 5 0.8335981 221 10 0.775510 25 3 0.579200 99 3 0.863095 36 3 0.6021242 62 3 0.583333 10 0 NA 0 0 0.675203 647 6 0.560177 186 5 0.639545 160 7 0.730952 65 5 0.486427 118 3 0.753295 94 7 0.689755 55 3 0.843666 279 5 0.773551 248 9 0.6338472 135 6 0.6666667 17 1 0.852962 184 6 0.740424 287 9 0.756347 302 9 0.870297 161 8 0.494560 154 9 0.5859210 306 10 0.685094 180 7 0.506173 114 6 0.584425 122 9 0.641689 258 8 0.608111 187 9 0.705188 207 8 0.5577107 190 7 0.6443999 248 5 0.6249462 205 9 0.6768535 0.3841446 0.585760 0.681950 0.512505 0.6559461 0.556501 0.6374929 0.557527 0.662195 0.7374754 0.568664 0.448933 0.820699 0.508581 0.438205 NA 0.5613937 0.3769996 0.5307594 0.897081 0.4274051 0.736001 0.581232 0.678263 0.578394 0.6231834 0.514895 0.642613 0.6240934 0.573944 0.7223605 0.440790 0.64326842 0.45300540 0.179922 0.4917779 0.6281074 0.3820391 0.596383 0.423661 0.416500 0.5374824 3 0.613433 0.657555 -0.04087790 7 0.734069 0.783152 -0.0490836 0.9610970 1.9358e-01 insignificant 1 1.0000e+00 insignificant 0.998114 1.9538e-01 insignificant 1 1.0000000 insignificant -0.04000993 0.310660 insignificant 1 insignificant 0.6134334 0.582670 0.05031058 7 0.734069 0.651347 0.08272138 8.6213e-04 9.8491e-01 weaklyHypermeth 1.5395e-02 1.0000e+00 weaklyHypermeth 3.6840e-03 9.9725e-01 weaklyHypermeth 8.9853e-02 1.0000e+00 weaklyHypermeth 0.11019573 1.4293e-02 weaklyHypermeth 3.5732e-01 insignificant 0.6078574 0.501931 0.1003048 7 0.717060 0.651469 0.0655914 1.2919e-02 9.1135e-01 weaklyHypermeth 7.5994e-01 1.00000000 insignificant 3.8270e-02 9.4071e-01 weaklyHypermeth 1.00000000 1.0000000 insignificant 0.0651015 0.07447362 insignificant 1.000000 insignificant 0.657570 0.582011 0.0909728 7 0.778052 0.628063 0.14998884 6.0704e-03 9.9996e-01 weaklyHypermeth 8.7977e-02 1.0000e+00 weaklyHypermeth 5.0710e-03 1.0000e+00 weaklyHypermeth 1.1896e-01 1.0000000 insignificant 0.15020566 3.7446e-03 weaklyHypermeth 1.2482e-01 insignificant 0.655244 0.501446 0.13620733 7 0.720558 0.586322 0.1342363 4.0726e-04 9.8160e-01 weaklyHypermeth 4.0726e-02 1.0000e+00 weaklyHypermeth 0.0015265 9.9801e-01 weaklyHypermeth 0.25442 1.0000000 insignificant 0.10511146 0.01749482 weaklyHypermeth 1.00000 insignificant 0.581916 0.501446 0.0506056 8 0.563149 0.586322 -0.0231734 7.0853e-01 3.1608e-01 insignificant 1.00000000 1.0000e+00 insignificant 0.81052874 2.0747e-01 insignificant 1.00000 1.0000e+00 insignificant -0.04509420 2.7443e-01 insignificant 1.0000e+00 insignificant chr1 179189516 179190516 3670 KIAA1614 ENSG00000135835 0.831332 1924 58 0.7189733 709 47 0.735296 833 45 0.7815650 1474 57 0.7531402 618 36 0.473289 2663 58 0.710271 760 36 0.843560 804 54 0.740877 717 39 0.841852 975 46 0.7654438 1259 50 0.532163 815 43 0.844070 1027 58 0.652043 680 33 0.8648337 1134 58 0.469942 569 38 0.664728 301 22 0.547152 2605 57 0.841264 1187 58 0.900770 1434 58 0.783089 476 39 0.748427 833 49 0.722370 1091 58 0.744498 460 35 0.801782 866 45 0.840686 726 47 0.7195986 1063 53 0.7138524 341 27 0.666826 910 50 0.900314 801 42 0.888089 722 43 0.751365 1732 58 0.036989 1232 58 0.0026366 1361 55 0.041946 677 31 0.080328 713 44 0.073750 946 45 0.125255 1940 58 0.869562 1555 56 0.670659 2038 55 0.9320879 1598 53 0.8981686 1994 55 0.6429836 1537 57 0.8438296 0.7602003 0.859609 0.791202 0.870979 0.5412671 0.830022 0.8764296 0.818430 0.874185 0.8030012 0.646657 0.946902 0.824277 0.906504 0.543795 0.7435620 0.6459405 0.9371327 0.9271720 0.869629 0.7663501 0.874982 0.772916 0.862909 0.859828 0.8437600 0.828485 0.791723 0.9371783 0.919008 0.7826987 0.034358 0.00579686 0.02422040 0.037681 0.0316983 0.0945980 0.9223145 0.678497 0.934921 0.911124 0.6157031 25 0.759766 0.833683 -0.06064812 58 0.687044 0.684236 0.0028081 0.9999968 3.1889e-07 weaklyHypometh 1 1.5944e-04 weaklyHypometh 0.999067 1.4133e-03 weaklyHypometh 1 0.3136368 insignificant -0.04777999 0.195064 insignificant 1 insignificant 0.7582046 0.054019 0.70350462 58 0.648270 0.072771 0.57549953 0.0000e+00 1.0000e+00 hypermethylated 0.0000e+00 1.0000e+00 hypermethylated 1.0297e-118 1.0000e+00 hypermethylated 1.0297e-115 1.0000e+00 hypermethylated 0.66547733 4.5419e-16 hypermethylated 1.5140e-13 hypermethylated 0.7598162 0.798670 -0.0469300 55 0.713675 0.788726 -0.0750514 1.0000e+00 7.4093e-04 weaklyHypometh 1.0000e+00 0.12348866 insignificant 1.0000e+00 2.6062e-01 insignificant 1.00000000 1.0000000 insignificant -0.0770641 0.29553906 insignificant 1.000000 insignificant 0.834450 0.054074 0.7725391 58 0.696357 0.078516 0.61784116 0.0000e+00 1.0000e+00 hypermethylated 0.0000e+00 1.0000e+00 hypermethylated 3.7030e-99 1.0000e+00 hypermethylated 3.7030e-96 1.0000000 hypermethylated 0.71325732 3.4919e-14 hypermethylated 3.4919e-11 hypermethylated 0.834850 0.798762 0.02398083 55 0.721934 0.799385 -0.0774502 6.8269e-01 9.6157e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.8291916 9.7029e-01 insignificant 1.00000 1.0000000 insignificant -0.02928416 0.66654125 insignificant 1.00000 insignificant 0.053967 0.798692 -0.7507661 55 0.068989 0.786867 -0.7178783 1.0000e+00 1.3702e-209 hypomethylated 1.00000000 1.3702e-206 hypomethylated 1.00000000 1.3930e-69 hypomethylated 1.00000 1.3930e-66 hypomethylated -0.74254148 1.2053e-04 hypomethylated 1.5067e-02 hypomethylated chr1 179370316 179371316 3682 IER5 ENSG00000162783 0.922297 57 1 0.8865741 75 6 0.478070 28 1 0.9446541 78 6 0.8690476 40 5 0.952772 177 5 0.800397 71 6 0.801010 57 4 0.769298 67 4 0.892788 117 6 0.9045183 108 6 0.819444 36 1 0.894608 76 5 0.837179 89 6 0.8802564 115 6 0.904762 53 6 0.666667 7 1 0.892188 86 3 0.655556 20 1 0.934127 101 5 0.779762 26 2 0.912037 48 2 0.880769 53 6 0.855093 56 6 0.908333 40 1 0.892500 69 6 0.7582345 51 3 0.7146825 63 6 0.875397 48 5 0.914310 74 6 0.866667 43 3 0.808425 103 6 0.174430 93 6 0.2557471 41 1 0.166667 73 5 0.500000 17 1 0.169170 83 5 0.637302 61 6 0.821825 78 6 0.853865 54 1 0.8100000 55 1 0.8211640 67 3 0.9270833 72 6 0.8512838 0.7659722 0.392105 0.906792 0.846429 0.9184569 0.721468 0.8844848 0.781947 0.900737 0.9314322 0.735000 0.832451 0.883538 0.849677 0.954286 0.8754992 0.9104688 0.8480000 0.8727262 0.867857 0.8688889 0.891308 0.869500 0.796000 0.878150 0.8455204 0.773619 0.809048 0.9340505 0.887000 0.7986322 0.079547 0.15172414 0.10000000 0.250000 0.1196957 0.4863333 0.8118571 0.889275 0.811800 0.855143 0.8668750 1 0.860082 0.833828 0.02830559 6 0.872389 0.836020 0.0363692 0.1027347 9.2433e-01 insignificant 1 1.0000e+00 insignificant 0.526191 8.1388e-01 insignificant 1 1.0000000 insignificant -0.01187344 0.718046 lowCoverage 1 lowCoverage 0.8600823 0.198370 0.66159853 5 0.872389 0.265035 0.60735388 7.4051e-39 1.0000e+00 hypermethylated 1.8513e-36 1.0000e+00 hypermethylated 2.2858e-10 1.0000e+00 hypermethylated 4.5716e-08 1.0000e+00 hypermethylated 0.51809140 9.5322e-04 lowCoverage 3.4044e-02 lowCoverage 0.8600823 0.861963 -0.0050058 2 0.872389 0.861652 0.0107367 2.1060e-01 4.2441e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 5.7075e-01 2.8915e-01 lowCoverage 1.00000000 1.0000000 lowCoverage -0.0114768 0.73927238 lowCoverage 1.000000 lowCoverage 0.833828 0.198370 0.6157981 5 0.836020 0.265035 0.57098465 3.3017e-26 1.0000e+00 hypermethylated 6.6034e-24 1.0000e+00 hypermethylated 3.2065e-09 1.0000e+00 hypermethylated 6.4130e-07 1.0000000 hypermethylated 0.52996484 1.0485e-03 lowCoverage 3.7447e-02 lowCoverage 0.833828 0.861963 -0.02004789 2 0.836020 0.861652 -0.0256326 8.5035e-01 1.7918e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.7685401 3.1544e-01 lowCoverage 1.00000 1.0000000 lowCoverage 0.00039664 0.98922772 lowCoverage 1.00000 lowCoverage 0.198370 0.861963 -0.6866670 2 0.265035 0.861652 -0.5966172 1.0000e+00 2.7093e-15 lowCoverage 1.00000000 3.8705e-13 lowCoverage 0.99981492 1.5017e-06 lowCoverage 1.00000 3.0034e-04 lowCoverage -0.52956820 1.0049e-03 lowCoverage 5.9891e-02 lowCoverage chr1 179370416 179371416 3683 IER5 ENSG00000162783 0.922297 57 1 0.8865741 75 6 0.478070 28 1 0.9446541 78 6 0.8690476 40 5 0.952772 177 5 0.800397 71 6 0.801010 57 4 0.769298 67 4 0.892788 117 6 0.9045183 108 6 0.819444 36 1 0.894608 76 5 0.837179 89 6 0.8802564 115 6 0.904762 53 6 0.666667 7 1 0.892188 86 3 0.655556 20 1 0.934127 101 5 0.779762 26 2 0.912037 48 2 0.880769 53 6 0.855093 56 6 0.908333 40 1 0.892500 69 6 0.7582345 51 3 0.7146825 63 6 0.875397 48 5 0.914310 74 6 0.866667 43 3 0.808425 103 6 0.174430 93 6 0.2557471 41 1 0.166667 73 5 0.500000 17 1 0.169170 83 5 0.637302 61 6 0.821825 78 6 0.853865 54 1 0.8100000 55 1 0.8211640 67 3 0.9270833 72 6 0.8512838 0.7659722 0.392105 0.906792 0.846429 0.9184569 0.721468 0.8844848 0.781947 0.900737 0.9314322 0.735000 0.832451 0.883538 0.849677 0.954286 0.8754992 0.9104688 0.8480000 0.8727262 0.867857 0.8688889 0.891308 0.869500 0.796000 0.878150 0.8455204 0.773619 0.809048 0.9340505 0.887000 0.7986322 0.079547 0.15172414 0.10000000 0.250000 0.1196957 0.4863333 0.8118571 0.889275 0.811800 0.855143 0.8668750 1 0.860082 0.833828 0.02830559 6 0.872389 0.836020 0.0363692 0.1027347 9.2433e-01 insignificant 1 1.0000e+00 insignificant 0.526191 8.1388e-01 insignificant 1 1.0000000 insignificant -0.01187344 0.718046 lowCoverage 1 lowCoverage 0.8600823 0.198370 0.66159853 5 0.872389 0.265035 0.60735388 7.4051e-39 1.0000e+00 hypermethylated 1.8513e-36 1.0000e+00 hypermethylated 2.2858e-10 1.0000e+00 hypermethylated 4.5716e-08 1.0000e+00 hypermethylated 0.51809140 9.5322e-04 lowCoverage 3.4044e-02 lowCoverage 0.8600823 0.861963 -0.0050058 2 0.872389 0.861652 0.0107367 2.1060e-01 4.2441e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 5.7075e-01 2.8915e-01 lowCoverage 1.00000000 1.0000000 lowCoverage -0.0114768 0.73927238 lowCoverage 1.000000 lowCoverage 0.833828 0.198370 0.6157981 5 0.836020 0.265035 0.57098465 3.3017e-26 1.0000e+00 hypermethylated 6.6034e-24 1.0000e+00 hypermethylated 3.2065e-09 1.0000e+00 hypermethylated 6.4130e-07 1.0000000 hypermethylated 0.52996484 1.0485e-03 lowCoverage 3.7447e-02 lowCoverage 0.833828 0.861963 -0.02004789 2 0.836020 0.861652 -0.0256326 8.5035e-01 1.7918e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.7685401 3.1544e-01 lowCoverage 1.00000 1.0000000 lowCoverage 0.00039664 0.98922772 lowCoverage 1.00000 lowCoverage 0.198370 0.861963 -0.6866670 2 0.265035 0.861652 -0.5966172 1.0000e+00 2.7093e-15 lowCoverage 1.00000000 3.8705e-13 lowCoverage 0.99981492 1.5017e-06 lowCoverage 1.00000 3.0034e-04 lowCoverage -0.52956820 1.0049e-03 lowCoverage 5.9891e-02 lowCoverage chr1 184524016 184525016 3799 HMCN1 ENSG00000143341 0.733664 199 6 0.7371554 85 6 0.639881 63 6 0.8262150 141 6 0.5854167 52 3 0.745910 239 8 0.629342 126 6 0.892201 67 5 0.741601 78 6 0.724074 64 6 0.6824495 138 6 0.834596 58 6 0.851010 86 6 NA 0 0 0.8576389 81 6 0.766958 80 6 0.688142 63 6 0.800187 138 6 0.882479 77 6 0.735257 217 6 0.894841 30 3 0.811391 70 6 0.588265 112 6 0.850000 30 3 0.830556 37 4 0.696935 116 6 0.8046296 44 3 0.6502976 34 3 0.485577 44 3 0.692853 104 6 0.881880 113 6 0.802004 319 6 0.680556 55 4 0.7831349 68 6 0.581441 140 8 0.848860 68 6 0.643519 50 3 0.721026 117 6 0.856560 184 6 0.836311 244 6 0.8157297 178 6 0.8002042 237 6 0.8526636 183 6 0.6991614 0.7316166 0.676875 0.756156 0.745643 0.8115700 0.696029 0.8396793 0.714366 0.758170 0.7519641 0.739503 0.890473 NA 0.857952 0.818842 0.8016696 0.8265799 0.8870454 0.7752125 0.803922 0.6949525 0.788563 0.859477 0.809368 0.698584 0.7254902 0.763150 0.664467 0.6998492 0.870615 0.7598935 0.698257 0.71292406 0.58738218 0.823753 0.6641249 0.7938082 0.8409043 0.822380 0.796953 0.792354 0.7689934 3 0.784113 0.777778 0.00063872 6 0.731923 0.745761 -0.0138386 0.3924029 1.3441e-01 insignificant 1 1.0000e+00 insignificant 0.541445 2.9426e-01 insignificant 1 1.0000000 insignificant 0.00638061 0.880191 lowCoverage 1 lowCoverage 0.7841131 0.700803 0.05986956 6 0.731923 0.687236 0.04468658 1.7971e-02 8.7445e-01 weaklyHypermeth 2.2748e-01 1.0000e+00 insignificant 4.7303e-02 8.7450e-01 weaklyHypermeth 7.2524e-01 1.0000e+00 insignificant 0.04572685 3.3225e-01 insignificant 1.0000e+00 insignificant 0.7841131 0.841131 -0.0421834 6 0.731923 0.866637 -0.1347143 9.9868e-01 1.3803e-02 weaklyHypometh 1.0000e+00 0.76685694 insignificant 9.9763e-01 4.6227e-02 weaklyHypometh 1.00000000 1.0000000 insignificant -0.0768107 0.00281922 weaklyHypometh 0.187948 insignificant 0.777778 0.700803 0.0528344 6 0.745761 0.687236 0.05852516 3.0535e-02 9.7093e-01 weaklyHypermeth 3.9502e-01 1.0000e+00 insignificant 1.1768e-01 9.6900e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.03934624 4.7716e-01 lowCoverage 1.0000e+00 lowCoverage 0.777778 0.841131 -0.03995060 6 0.745761 0.866637 -0.1208757 9.3175e-01 8.2390e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 0.8533999 3.1989e-01 insignificant 1.00000 1.0000000 insignificant -0.08319127 0.04841288 lowCoverage 1.00000 lowCoverage 0.700803 0.841131 -0.0975454 6 0.687236 0.866637 -0.1794009 9.9998e-01 1.4351e-03 weaklyHypometh 1.00000000 3.5002e-02 weaklyHypometh 0.99939507 1.5312e-02 weaklyHypometh 1.00000 3.6328e-01 insignificant -0.12253751 2.5369e-02 weaklyHypometh 6.3424e-01 insignificant chr1 199248916 199249916 3994 ENSG00000201032 0.837920 148 7 0.6418223 192 7 0.900891 206 8 0.9843750 75 1 0.8174080 194 8 0.825116 195 4 0.920915 344 8 0.852951 142 8 0.890319 246 8 0.864758 184 8 0.8821477 206 8 0.892342 320 8 0.810789 228 8 0.868421 38 1 0.9167148 255 8 0.810381 354 8 0.811921 168 8 0.839674 116 1 0.964347 195 8 0.959868 88 4 0.747064 81 5 0.121951 47 1 0.890394 209 8 0.736347 109 5 0.864583 34 1 0.917706 270 8 0.8266748 99 5 0.8006031 81 5 0.775491 173 8 0.975720 202 6 0.855609 211 8 0.898144 175 8 0.353732 291 8 0.7017273 232 8 0.255882 123 4 0.120130 25 1 0.239570 109 8 0.725272 261 7 0.925551 105 7 0.805972 157 7 0.7546296 68 1 0.8936508 100 7 0.7228709 109 7 0.7273941 0.6875207 0.875045 0.917630 0.791207 0.8460195 0.922990 0.8134187 0.813426 0.860020 0.8840817 0.870176 0.846167 NA 0.881478 0.754820 0.6468718 0.7506476 0.8781996 0.8640309 0.863722 0.5875988 0.864451 0.657788 0.781453 0.909017 0.7800193 0.775454 0.828868 0.9153755 0.827947 0.8713884 0.232702 0.45336514 0.09510185 0.102542 0.2372783 0.7644953 0.6472305 0.620390 0.648833 0.810141 0.5345170 1 0.849512 0.840331 0.00651665 8 0.826796 0.809855 0.0169409 0.1735209 7.8660e-01 insignificant 1 1.0000e+00 insignificant 0.078847 8.6298e-01 insignificant 1 1.0000000 insignificant 0.08046352 0.243875 insignificant 1 insignificant 0.8495121 0.446686 0.40528632 8 0.826796 0.549555 0.27724116 1.3231e-28 1.0000e+00 hypermethylated 1.6539e-26 1.0000e+00 hypermethylated 2.1426e-15 1.0000e+00 hypermethylated 7.1420e-13 1.0000e+00 hypermethylated 0.46526855 6.1061e-03 weaklyHypermeth 1.7446e-01 insignificant 0.8495121 0.721707 0.1183364 7 0.826796 0.848931 -0.0221353 6.6933e-04 3.0492e-01 weaklyHypermeth 8.3667e-02 1.00000000 weaklyHypermeth 1.2530e-02 3.0515e-01 weaklyHypermeth 1.00000000 1.0000000 insignificant 0.0441191 0.34173450 insignificant 1.000000 insignificant 0.840331 0.446686 0.4114219 8 0.809855 0.549555 0.26030028 6.8135e-16 9.9998e-01 hypermethylated 4.5423e-14 1.0000e+00 hypermethylated 1.4898e-10 9.9998e-01 hypermethylated 4.9661e-08 1.0000000 hypermethylated 0.38480503 1.1762e-02 weaklyHypermeth 3.3260e-01 insignificant 0.840331 0.721707 0.11883471 7 0.809855 0.848931 -0.0390762 2.5061e-02 3.0911e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.0892720 1.0056e-01 insignificant 1.00000 1.0000000 insignificant -0.03634438 0.63344441 insignificant 1.00000 insignificant 0.446686 0.721707 -0.3099164 7 0.549555 0.848931 -0.2993765 1.0000e+00 2.8422e-07 hypomethylated 1.00000000 1.4211e-05 hypomethylated 1.00000000 1.1124e-06 hypomethylated 1.00000 3.0034e-04 hypomethylated -0.42114941 8.1067e-03 weaklyHypometh 3.0025e-01 insignificant chr1 199510316 199511316 4004 IGFN1 ENSG00000163395 0.932314 192 6 0.713747 189 6 0.8588603 111 6 0.977653 158 6 0.7955026 56 5 0.924490 404 6 0.868783 81 6 0.7181023 166 6 0.8181004 117 6 0.785208 83 6 0.918022 237 6 0.587037 35 3 0.702129 137 6 0.8624820 51 3 0.9448030 97 4 0.7708333 30 3 0.6190476 16 1 0.830458 188 6 0.8038520 214 6 0.893767 201 6 0.575172 156 6 0.764989 116 6 0.936651 170 6 0.758844 135 6 0.708868 122 7 0.754741 202 6 0.883448 157 6 0.655944 49 3 0.9112572 182 6 0.702629 228 6 0.937811 208 6 0.898995 343 6 0.696950 173 6 0.6346470 144 6 0.703019 281 6 0.5386853 79 5 0.722162 140 6 0.6551997 226 6 0.655181 209 6 0.8260413 267 6 0.877161 160 6 0.882636 165 6 0.817752 191 6 0.922870 0.6516376 0.861969 0.955862 0.7771644 0.916334 0.8685891 0.825511 0.7546070 0.9041224 0.929565 0.7353918 0.8684530 0.8608924 0.9005446 0.6538845 0.5471023 0.773168 0.878361 0.895398 0.9505420 0.895048 0.928557 0.9474358 0.7704183 0.8988521 0.8525609 0.890257 0.920543 0.9285459 0.9115889 0.8814492 0.5115911 0.4836222 0.6211108 0.55543916 0.501215 0.4858709 0.852924 0.9141208 0.873682 0.8564497 0.810305 3 0.8646399 0.895551 -3.5940e-02 6 0.6457983 0.747509 -0.10171095 0.9498418 0.17146475 insignificant 1 1.000000 insignificant 0.97536 1.9767e-01 insignificant 1 1.000000 insignificant 0.02548041 0.55316194 insignificant 1.00000 insignificant 0.8657962 0.515820 0.25449600 6 0.746168 0.544593 0.2015750 5.5715e-07 9.1167e-01 hypermethylated 1.3589e-05 1.0000e+00 hypermethylated 2.1736e-02 9.6404e-01 weaklyHypermeth 3.5058e-01 1.00000000 insignificant 0.1578158 0.00073574 weaklyHypermeth 0.036787 weaklyHypermeth 0.8654334 0.8800403 -0.0114086 6 0.754118 0.630714 0.12340396 9.9084e-01 7.5614e-01 insignificant 1.0000e+00 1.000000 insignificant 0.90322167 9.4131e-01 insignificant 1.000000 1.000000 insignificant 0.0045053 0.92746946 insignificant 1.00000 insignificant 0.8984451 0.515820 0.3008228 6 0.769557 0.544593 0.2249647 3.4559e-09 9.7392e-01 hypermethylated 1.3292e-07 1.0000000 hypermethylated 1.8331e-03 9.9869e-01 weaklyHypermeth 4.8239e-02 1.000000 weaklyHypermeth 0.1323354 0.0088291 weaklyHypermeth 0.232346 insignificant 0.8969874 0.8800403 2.4736e-02 6 0.754846 0.630714 0.12413263 3.5477e-01 9.9251e-01 insignificant 1.0000e+00 1.000000 insignificant 2.6583e-01 0.9997120 insignificant 1.000000 1 insignificant -0.0209751 0.7058233 insignificant 1.00000 insignificant 0.516843 0.8809284 -0.29019221 6 0.554502 0.700793 -0.14629099 9.9338e-01 3.1323e-06 hypomethylated 1.0000e+00 1.3051e-04 hypomethylated 9.9345e-01 1.9711e-01 insignificant 1.000000 1.0000e+00 insignificant -0.1533105 0.01686084 weaklyHypometh 0.468357 insignificant chr1 199715716 199716716 4019 PHLDA3 ENSG00000174307 0.000000 94 7 0.005102 340 13 0.0071256 435 13 0.000000 72 4 0.0032809 471 13 0.096976 399 11 0.011480 659 13 0.0096939 340 13 0.0162393 277 13 0.006689 255 13 0.015253 528 13 0.011189 355 13 0.017117 267 13 0.0000000 56 4 0.0048077 301 13 0.0042221 331 13 0.0066316 266 10 0.077778 71 5 0.0052166 400 13 0.014990 308 12 0.011111 194 13 0.050000 9 0 0.031181 209 13 0.040385 181 13 0.000000 15 0 0.013218 432 13 0.008547 279 13 0.000000 155 13 0.0805818 229 13 0.000000 466 14 0.010256 431 13 0.000000 286 7 0.041271 366 13 0.0158089 281 13 0.015840 437 12 0.0000000 25 0 0.036124 211 12 0.0297517 240 12 0.124512 321 6 0.0014493 297 13 0.079882 86 4 0.087912 96 4 0.016667 169 5 0.000000 0.0040711 0.017299 0.000000 0.0028642 0.012615 0.0086973 0.022354 0.0059873 0.0024780 0.008279 0.0108808 0.0081379 0.0031685 0.0080959 0.0036153 0.0053686 0.013817 0.008183 0.010398 0.0048359 0.011510 0.036176 0.0204663 0.0036026 0.0075782 0.0028785 0.000000 0.022494 0.0000000 0.0037133 0.0017795 0.0603682 0.0285084 0.0198480 0.02721340 0.056107 0.0212838 0.030555 0.0028159 0.033878 0.0433013 0.024352 2 0.0073931 0.009702 -1.9422e-03 13 0.0076945 0.032542 -0.02484728 0.9576689 0.62424975 insignificant 1 1.000000 insignificant 0.91154 8.8740e-01 insignificant 1 1.000000 insignificant -0.00475045 0.61212473 insignificant 1.00000 insignificant 0.0074158 0.026282 -0.01738293 13 0.008244 0.022032 -0.0137882 9.5605e-01 3.6645e-05 weaklyHypometh 1.0000e+00 6.1075e-03 weaklyHypometh 9.6729e-01 8.9619e-05 weaklyHypometh 1.0000e+00 0.02240483 weaklyHypometh -0.0074430 0.39330004 insignificant 1.000000 insignificant 0.0078753 0.0134159 -0.0065913 5 0.074361 0.070578 0.00378320 7.9320e-01 4.7261e-03 weaklyHypometh 1.0000e+00 0.393845 insignificant 0.85570707 4.2688e-01 insignificant 1.000000 1.000000 insignificant -0.0463949 0.11440185 insignificant 1.00000 insignificant 0.0097391 0.026282 -0.0162757 13 0.034866 0.022032 0.0128339 9.6610e-01 1.4675e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant 9.8287e-01 4.5836e-03 weaklyHypometh 1.0000e+00 0.763927 insignificant -0.0026926 0.7837913 insignificant 1.000000 insignificant 0.0093652 0.0124224 -6.5214e-03 5 0.011057 0.051810 -0.04075305 9.9202e-01 1.1606e-01 insignificant 1.0000e+00 1.000000 insignificant 9.9337e-01 0.7464545 insignificant 1.000000 1 insignificant -0.0416444 0.1476683 insignificant 1.00000 insignificant 0.026316 0.0125392 0.01392386 5 0.023727 0.055795 -0.03206797 1.1863e-01 4.4018e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.1171e-01 9.0089e-01 insignificant 1.000000 1.0000e+00 insignificant -0.0389518 0.16896002 insignificant 1.000000 insignificant chr1 199939216 199940216 4043 NAV1 ENSG00000134369 0.188462 171 6 0.262122 192 6 0.3052351 65 6 0.210391 176 6 0.1369896 68 2 0.234194 257 6 0.154622 105 6 0.2092509 73 6 0.2251852 86 6 0.303401 43 2 0.148387 93 6 0.177778 46 2 0.066667 18 2 0.2721088 31 2 0.1441121 57 2 0.2962963 34 2 NA 0 0 0.195124 237 5 0.2001634 78 2 0.253029 157 6 0.200000 64 6 0.520833 17 2 0.166667 40 2 0.298214 99 6 0.109490 313 6 0.155405 143 6 0.107527 91 5 0.141667 44 2 0.1721133 43 2 0.186751 124 6 0.183448 107 6 0.201423 122 6 0.036667 91 6 0.0410394 166 6 0.062500 11 0 0.1069519 183 6 0.149199 105 7 0.2377730 142 6 0.148748 185 6 0.2049942 127 6 0.183312 117 6 0.764615 102 2 0.220067 127 6 0.462587 0.4487643 0.464992 0.425506 0.3362471 0.574839 0.3795264 0.461668 0.5123232 0.4597403 0.364223 0.4363636 0.1636364 0.3701299 0.3537296 0.7272727 NA 0.478941 0.491310 0.584709 0.4909091 0.426279 0.409091 0.5668831 0.4353742 0.5085995 0.2639296 0.347727 0.422460 0.5347860 0.4502814 0.4944013 0.0536364 0.1007331 0.0000000 0.26251823 0.099829 0.5836247 0.425959 0.5031676 0.449947 0.6267308 0.503801 2 0.4192250 0.341952 2.4378e-02 6 0.3567617 0.200127 0.15663423 0.0966122 0.99760255 insignificant 1 1.000000 insignificant 0.38911 9.8583e-01 insignificant 1 1.000000 insignificant 0.00603071 0.86683684 lowCoverage 1.00000 lowCoverage 0.4192250 0.218077 0.19947507 6 0.356762 0.187100 0.1696614 4.3820e-04 8.4102e-01 weaklyHypermeth 7.0677e-03 1.0000e+00 weaklyHypermeth 5.0081e-03 8.4597e-01 weaklyHypermeth 1.1519e-01 1.00000000 insignificant 0.1039705 0.01970929 lowCoverage 0.469269 lowCoverage 0.4188508 0.4696049 -0.0210394 6 0.312490 0.177101 0.13538866 9.0475e-01 8.8991e-01 insignificant 1.0000e+00 1.000000 insignificant 0.86459833 6.3620e-01 insignificant 1.000000 1.000000 insignificant -0.0946883 0.46102060 lowCoverage 1.00000 lowCoverage 0.3416667 0.217765 0.1531913 6 0.177891 0.166311 0.0115797 3.6212e-02 8.0138e-01 weaklyHypermeth 3.8118e-01 1.0000000 insignificant 1.3824e-01 9.0607e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0979398 0.0480630 lowCoverage 0.828672 lowCoverage 0.3428094 0.4696049 -4.1264e-02 6 0.228717 0.177101 0.05161621 9.4226e-01 4.0194e-01 insignificant 1.0000e+00 1.000000 insignificant 9.9106e-01 0.5440104 insignificant 1.000000 1 insignificant -0.1007190 0.4427334 lowCoverage 1.00000 lowCoverage 0.219020 0.4696049 -0.21944785 6 0.213829 0.177101 0.03672802 8.7936e-01 1.3764e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7446e-01 1.5564e-01 insignificant 1.000000 1.0000e+00 insignificant -0.1986588 0.16362929 insignificant 1.000000 insignificant chr1 199939316 199940316 4044 NAV1 ENSG00000134369 0.188462 171 6 0.262122 192 6 0.3052351 65 6 0.210391 176 6 0.1369896 68 2 0.234194 257 6 0.154622 105 6 0.2092509 73 6 0.2251852 86 6 0.303401 43 2 0.148387 93 6 0.177778 46 2 0.066667 18 2 0.2721088 31 2 0.1441121 57 2 0.2962963 34 2 NA 0 0 0.195124 237 5 0.2001634 78 2 0.253029 157 6 0.200000 64 6 0.520833 17 2 0.166667 40 2 0.298214 99 6 0.109490 313 6 0.155405 143 6 0.107527 91 5 0.141667 44 2 0.1721133 43 2 0.186751 124 6 0.183448 107 6 0.201423 122 6 0.036667 91 6 0.0410394 166 6 0.062500 11 0 0.1069519 183 6 0.149199 105 7 0.2377730 142 6 0.148748 185 6 0.2049942 127 6 0.183312 117 6 0.764615 102 2 0.220067 127 6 0.462587 0.4487643 0.464992 0.425506 0.3362471 0.574839 0.3795264 0.461668 0.5123232 0.4597403 0.364223 0.4363636 0.1636364 0.3701299 0.3537296 0.7272727 NA 0.478941 0.491310 0.584709 0.4909091 0.426279 0.409091 0.5668831 0.4353742 0.5085995 0.2639296 0.347727 0.422460 0.5347860 0.4502814 0.4944013 0.0536364 0.1007331 0.0000000 0.26251823 0.099829 0.5836247 0.425959 0.5031676 0.449947 0.6267308 0.503801 2 0.4192250 0.341952 2.4378e-02 6 0.3567617 0.200127 0.15663423 0.0966122 0.99760255 insignificant 1 1.000000 insignificant 0.38911 9.8583e-01 insignificant 1 1.000000 insignificant 0.00603071 0.86683684 lowCoverage 1.00000 lowCoverage 0.4192250 0.218077 0.19947507 6 0.356762 0.187100 0.1696614 4.3820e-04 8.4102e-01 weaklyHypermeth 7.0677e-03 1.0000e+00 weaklyHypermeth 5.0081e-03 8.4597e-01 weaklyHypermeth 1.1519e-01 1.00000000 insignificant 0.1039705 0.01970929 lowCoverage 0.469269 lowCoverage 0.4188508 0.4696049 -0.0210394 6 0.312490 0.177101 0.13538866 9.0475e-01 8.8991e-01 insignificant 1.0000e+00 1.000000 insignificant 0.86459833 6.3620e-01 insignificant 1.000000 1.000000 insignificant -0.0946883 0.46102060 lowCoverage 1.00000 lowCoverage 0.3416667 0.217765 0.1531913 6 0.177891 0.166311 0.0115797 3.6212e-02 8.0138e-01 weaklyHypermeth 3.8118e-01 1.0000000 insignificant 1.3824e-01 9.0607e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0979398 0.0480630 lowCoverage 0.828672 lowCoverage 0.3428094 0.4696049 -4.1264e-02 6 0.228717 0.177101 0.05161621 9.4226e-01 4.0194e-01 insignificant 1.0000e+00 1.000000 insignificant 9.9106e-01 0.5440104 insignificant 1.000000 1 insignificant -0.1007190 0.4427334 lowCoverage 1.00000 lowCoverage 0.219020 0.4696049 -0.21944785 6 0.213829 0.177101 0.03672802 8.7936e-01 1.3764e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7446e-01 1.5564e-01 insignificant 1.000000 1.0000e+00 insignificant -0.1986588 0.16362929 insignificant 1.000000 insignificant chr1 200175516 200176516 4062 SHISA4 ENSG00000198892 0.752115 177 5 0.630023 101 4 0.5668254 83 5 0.748439 113 5 0.6975773 45 4 0.835304 108 4 0.615682 79 4 0.5508547 51 3 0.5593846 58 4 0.743939 24 2 0.697264 127 4 0.609091 30 3 0.612500 39 3 0.5179487 32 4 0.7658730 53 4 0.5208333 24 2 0.6469296 457 3 0.719828 138 5 0.7459293 53 4 0.713354 77 4 0.666667 20 1 1.000000 7 0 0.674476 126 5 0.617778 37 4 0.725909 40 3 0.743939 141 5 0.850000 19 1 0.355556 23 1 0.7640625 43 2 0.702770 121 5 0.700643 113 5 0.672488 92 4 0.732222 86 4 0.6667961 40 3 0.684196 57 4 0.5000000 13 0 0.628889 63 4 0.6117222 134 5 0.683695 156 5 0.6949074 157 5 0.740922 173 5 0.804175 125 4 0.787813 166 5 0.789893 0.7111252 0.658739 0.799536 0.7017639 0.851285 0.6938963 0.692381 0.7337063 0.6311123 0.783428 0.5320248 0.8107560 0.8095862 0.7775523 0.6355666 0.8027674 0.744497 0.851976 0.738652 0.8825758 0.839433 0.750459 0.7378788 0.8051911 0.8205062 0.8304924 0.504735 0.864619 0.7459602 0.7432913 0.7290987 0.7685606 0.7349092 0.7336459 0.64626976 0.663763 0.7210923 0.727028 0.7274944 0.793456 0.8387528 0.818862 1 0.7394329 0.778772 1.4142e-02 5 0.7092714 0.685565 0.02370672 0.2290357 0.57748680 insignificant 1 1.000000 insignificant 0.79182 5.5048e-01 insignificant 1 1.000000 insignificant -0.04370585 0.37455969 lowCoverage 1.00000 lowCoverage 0.7394329 0.727735 0.05976911 5 0.709271 0.644526 0.0647456 5.3781e-02 9.5101e-01 insignificant 5.5444e-01 1.0000e+00 insignificant 3.7883e-01 8.1935e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0251806 0.52792886 lowCoverage 1.000000 lowCoverage 0.7394329 0.8043758 -0.0155142 5 0.709271 0.743107 -0.03383591 7.8636e-01 2.2705e-01 insignificant 1.0000e+00 1.000000 insignificant 0.57322443 1.2707e-01 insignificant 1.000000 1.000000 insignificant -0.0798176 0.02874034 lowCoverage 0.90462 lowCoverage 0.7787724 0.727735 0.0466370 5 0.685565 0.644526 0.0410389 5.0821e-02 9.5308e-01 insignificant 5.0318e-01 1.0000000 insignificant 2.6912e-01 9.5176e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0688865 0.2210743 lowCoverage 1.000000 lowCoverage 0.7787724 0.8043758 -4.1612e-02 5 0.685565 0.743107 -0.05754263 8.9633e-01 4.7674e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 8.2872e-01 0.3297600 insignificant 1.000000 1 insignificant -0.0361117 0.4767577 lowCoverage 1.00000 lowCoverage 0.727735 0.8043758 -0.08274581 5 0.644526 0.743107 -0.09858149 9.6959e-01 6.1298e-04 weaklyHypometh 1.0000e+00 1.5717e-02 weaklyHypometh 9.3758e-01 1.1858e-01 insignificant 1.000000 1.0000e+00 insignificant -0.1049982 0.02961923 lowCoverage 0.580769 lowCoverage chr1 200202916 200203916 4063 TIMM17A ENSG00000134375 0.739956 164 5 0.662967 203 5 0.6413149 113 5 0.680475 222 5 0.7201526 105 5 0.732470 341 5 0.679171 132 5 0.7170990 198 5 0.7128843 117 5 0.654484 129 5 0.730469 255 5 0.710000 70 5 0.774587 188 5 0.7000000 108 5 0.6784779 162 5 0.6396104 43 3 0.6587302 52 4 0.748474 205 5 0.6532586 125 5 0.793550 159 5 0.704762 83 5 0.733007 74 5 0.633525 111 5 0.741403 110 5 0.696271 76 5 0.713958 202 5 0.607855 98 5 0.723810 49 4 0.7009230 204 5 0.757497 258 5 0.705197 150 5 0.722296 204 5 0.675877 194 5 0.5866667 103 5 0.628365 146 5 0.6619048 47 3 0.692276 97 5 0.6774235 160 5 0.762092 171 5 0.6724639 148 5 0.677540 213 5 0.772269 141 5 0.725041 160 5 0.715177 0.6383608 0.614085 0.660345 0.6910798 0.710077 0.6584869 0.698636 0.6858562 0.6293372 0.706226 0.6788304 0.7616336 0.6794737 0.6501435 0.6170084 0.6381509 0.736006 0.626711 0.777039 0.6841270 0.701353 0.605460 0.7212106 0.6653181 0.6957671 0.5766921 0.684211 0.677659 0.7400275 0.6767488 0.6937051 0.6572649 0.5594737 0.6119625 0.62857143 0.672150 0.6517301 0.734663 0.6395037 0.649933 0.7558025 0.698621 5 0.7589777 0.712168 3.3809e-03 5 0.7087959 0.706224 0.00257186 0.5820292 0.66387888 insignificant 1 1.000000 insignificant 0.59787 2.6664e-01 insignificant 1 1.000000 insignificant -0.00196885 0.90196625 lowCoverage 1.00000 lowCoverage 0.7589777 0.686747 0.04120815 5 0.708796 0.653788 0.0550083 8.9216e-04 8.5322e-01 weaklyHypermeth 1.3518e-02 1.0000e+00 weaklyHypermeth 6.0498e-03 4.9047e-01 weaklyHypermeth 1.2939e-01 1.00000000 insignificant 0.0476544 0.03198700 lowCoverage 0.680574 lowCoverage 0.7589777 0.8151261 -0.0181891 5 0.708796 0.720350 -0.01155365 8.6128e-01 1.2099e-01 insignificant 1.0000e+00 1.000000 insignificant 0.94838629 4.1643e-02 weaklyHypometh 1.000000 1.000000 insignificant -0.0204746 0.40652941 lowCoverage 1.00000 lowCoverage 0.7121680 0.686747 0.0383041 5 0.706224 0.653788 0.0524365 1.9703e-03 8.0160e-01 weaklyHypermeth 3.0312e-02 1.0000000 weaklyHypermeth 6.5824e-03 7.8399e-01 weaklyHypermeth 1.2639e-01 1.000000 insignificant 0.0496233 0.0325308 lowCoverage 0.625592 lowCoverage 0.7121680 0.8151261 -1.9888e-02 5 0.706224 0.720350 -0.01412551 9.1622e-01 1.4374e-01 insignificant 1.0000e+00 1.000000 insignificant 9.3850e-01 0.3548957 insignificant 1.000000 1 insignificant -0.0185058 0.4678849 lowCoverage 1.00000 lowCoverage 0.686747 0.8151261 -0.05278456 5 0.653788 0.720350 -0.06656199 9.9830e-01 4.2186e-03 weaklyHypometh 1.0000e+00 7.6702e-02 weaklyHypometh 9.8160e-01 7.4141e-03 weaklyHypometh 1.000000 2.0323e-01 insignificant -0.0681290 0.03177599 lowCoverage 0.611077 lowCoverage chr1 200243616 200244616 4064 ELF3 ENSG00000163435 0.314664 130 5 0.284127 140 5 0.2705882 103 4 0.352948 101 5 0.3257143 47 5 0.299918 269 5 0.310998 109 5 0.2544803 84 4 0.0925052 82 3 0.268889 71 3 0.273732 166 5 0.213953 108 3 0.598990 76 4 0.4285714 7 1 0.4084848 82 4 0.3117647 83 3 0.0527778 76 3 0.481410 56 3 0.3988055 72 5 0.326520 150 5 0.284492 48 4 0.233333 34 3 0.269302 132 5 0.262051 67 5 0.215278 27 3 0.426438 101 5 0.361296 81 5 0.424348 48 3 0.3374359 55 4 0.473885 114 5 0.413025 100 5 0.226367 227 5 0.369814 109 5 0.4592075 58 4 0.332329 184 5 0.0781250 51 3 0.442857 36 4 0.2743486 82 5 0.450433 161 5 0.3591172 182 5 0.350226 125 5 0.205556 90 4 0.511249 119 3 0.147665 0.1080247 0.026961 0.139220 0.0771825 0.113269 0.1323922 0.125087 0.0767915 0.0469522 0.098535 0.1103036 0.4587542 0.1443256 0.2574285 0.0667892 0.0762346 0.253606 0.228183 0.236555 0.0696301 0.189626 0.059856 0.0425570 0.1844136 0.2507988 0.1039824 0.189218 0.169462 0.4074909 0.2331495 0.0576389 0.1254549 0.3328801 0.1547090 0.06814236 0.251157 0.1327655 0.328056 0.1711766 0.131359 0.1743827 0.390961 3 0.2664016 0.251451 -7.3014e-03 5 0.3198444 0.324634 -0.00478922 0.7446654 0.50516951 insignificant 1 1.000000 insignificant 0.95087 2.3924e-01 insignificant 1 1.000000 insignificant -0.01377889 0.71691901 lowCoverage 1.00000 lowCoverage 0.2664016 0.276923 -0.04321517 5 0.319844 0.354544 -0.0346999 9.2258e-01 1.4210e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.5674e-01 1.8845e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0126213 0.84681728 lowCoverage 1.000000 lowCoverage 0.2664016 0.5273264 -0.0601939 5 0.319844 0.386786 -0.06694146 6.3669e-01 9.9288e-04 weaklyHypometh 1.0000e+00 0.142628 insignificant 0.77470436 8.7294e-03 weaklyHypometh 1.000000 0.793584 insignificant -0.0618240 0.32904288 lowCoverage 1.00000 lowCoverage 0.2514507 0.276923 -0.0397785 5 0.324634 0.354544 -0.0299107 8.5362e-01 3.5286e-01 insignificant 1.0000e+00 1.0000000 insignificant 8.7122e-01 4.2678e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0011576 0.9857765 lowCoverage 1.000000 lowCoverage 0.2514507 0.5273264 -6.6465e-02 5 0.324634 0.386786 -0.06215225 7.3790e-01 4.2084e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 7.7769e-01 0.0461047 weaklyHypometh 1.000000 1 insignificant -0.0480451 0.4392084 lowCoverage 1.00000 lowCoverage 0.276923 0.5273264 -0.01464607 5 0.354544 0.386786 -0.03224151 6.9581e-01 2.0758e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.9411e-01 2.7689e-01 insignificant 1.000000 1.0000e+00 insignificant -0.0492027 0.53913583 lowCoverage 1.000000 lowCoverage chr1 200263716 200264716 4069 ENSG00000220486 0.764600 293 10 0.722078 174 10 0.6119550 213 10 0.774048 133 9 0.7514636 141 10 0.831274 400 10 0.776406 224 10 0.8012566 103 6 0.7343076 139 10 0.775195 139 10 0.751646 332 10 0.634841 155 10 0.759722 211 10 NA 0 0 0.7655295 211 10 0.7100458 180 10 0.7243601 173 10 0.854762 208 10 0.7186249 177 10 0.830776 359 10 0.687269 82 6 0.806551 101 6 0.770705 181 10 0.732381 121 6 0.613690 58 7 0.768810 193 10 0.839881 79 5 0.752932 90 8 0.5731654 118 10 0.720412 251 10 0.694251 222 10 0.812893 401 10 0.626248 154 9 0.7637968 142 9 0.769321 215 10 0.6762626 73 6 0.743215 108 6 0.6647656 157 10 0.836315 223 10 0.8007349 228 10 0.903824 125 6 0.837128 169 6 0.844495 230 10 0.775361 0.7437649 0.644312 0.780220 0.7463615 0.836009 0.7561770 0.771673 0.7113446 0.7780913 0.740266 0.6652541 0.7769714 NA 0.7657487 0.6955653 0.7150843 0.846879 0.684966 0.818119 0.6607239 0.804660 0.747047 0.7729141 0.6783679 0.7841330 0.7851292 0.768468 0.563995 0.7499674 0.7165733 0.8090772 0.6618882 0.7220013 0.7525262 0.69554520 0.741062 0.6547091 0.823945 0.8066092 0.910361 0.8103041 0.857476 4 0.7475410 0.733263 9.3058e-03 10 0.7559747 0.741511 0.01446324 0.2147694 0.70821448 insignificant 1 1.000000 insignificant 0.51915 3.8035e-01 insignificant 1 1.000000 insignificant 0.02117913 0.43999716 insignificant 1.00000 insignificant 0.7475410 0.709069 0.03813969 10 0.755975 0.718519 0.0374554 2.3333e-04 9.1329e-01 weaklyHypermeth 4.0229e-03 1.0000e+00 weaklyHypermeth 8.1377e-03 9.6832e-01 weaklyHypermeth 1.5354e-01 1.00000000 insignificant 0.0449892 0.14372257 insignificant 1.000000 insignificant 0.7475410 0.8492308 -0.0624829 9 0.755975 0.835324 -0.07934932 9.9999e-01 3.1280e-05 weaklyHypometh 1.0000e+00 0.024002 weaklyHypometh 0.99999989 2.5915e-05 weaklyHypometh 1.000000 0.025915 weaklyHypometh -0.0922419 0.00155264 weaklyHypometh 0.22181 insignificant 0.7332630 0.709069 0.0304108 10 0.741511 0.718519 0.0229921 7.4466e-03 9.3848e-01 weaklyHypermeth 9.6709e-02 1.0000000 weaklyHypermeth 2.1396e-02 9.8570e-01 weaklyHypermeth 3.2917e-01 1.000000 insignificant 0.0238101 0.4887896 insignificant 1.000000 insignificant 0.7332630 0.8492308 -7.5088e-02 9 0.741511 0.835324 -0.09381255 9.9997e-01 7.8473e-04 weaklyHypometh 1.0000e+00 0.392367 insignificant 9.9326e-01 0.0016055 weaklyHypometh 1.000000 1 insignificant -0.1134211 0.0012417 weaklyHypometh 0.20695 insignificant 0.709069 0.8492308 -0.12039776 9 0.718519 0.835324 -0.11680468 1.0000e+00 1.8752e-08 weaklyHypometh 1.0000e+00 1.2502e-06 weaklyHypometh 1.0000e+00 2.4570e-06 weaklyHypometh 1.000000 8.1899e-04 weaklyHypometh -0.1372311 0.00139069 weaklyHypometh 0.092712 weaklyHypometh chr1 200434916 200435916 4079 ENSG00000208212 0.822377 210 7 0.672000 173 11 0.7924014 182 10 0.829829 164 7 0.6599512 129 12 0.880898 468 11 0.635703 118 7 0.8108149 212 12 0.7856984 149 12 0.829206 206 12 0.790951 346 12 0.618301 60 3 0.865161 221 11 0.8342475 145 8 0.7264798 189 12 0.7447917 60 3 0.4565176 212 3 0.811337 320 5 0.7385009 235 7 0.741218 192 5 0.729261 77 6 0.791533 53 6 0.659944 140 5 0.886246 179 12 0.933937 161 7 0.806756 222 12 0.727431 180 10 0.655655 101 7 0.6408304 234 10 0.763010 262 12 0.827013 242 12 0.873281 218 11 0.503937 201 11 0.5953767 192 12 0.231710 161 5 0.2380952 20 0 0.515602 147 11 0.1643374 349 12 0.761573 147 3 0.8853345 180 6 0.955588 178 5 0.758705 222 5 0.881872 105 4 0.841710 0.7602861 0.899847 0.880820 0.7021379 0.871577 0.6327305 0.771837 0.7743515 0.8579435 0.901855 0.7161085 0.8391686 0.8756617 0.8577789 0.7975453 0.6364608 0.784770 0.734491 0.809444 0.6699972 0.755566 0.719929 0.8414673 0.8599481 0.8651851 0.7761693 0.668588 0.786677 0.8558897 0.8503009 0.9253380 0.3813089 0.4838970 0.4794705 0.18145386 0.554280 0.0912380 0.840084 0.8455750 0.866629 0.8061890 0.786528 2 0.8073165 0.813436 6.2155e-04 10 0.7693827 0.766805 0.00257816 0.6505438 0.29354599 insignificant 1 1.000000 insignificant 0.90546 3.9881e-01 insignificant 1 1.000000 insignificant -0.02225558 0.54133404 insignificant 1.00000 insignificant 0.8073165 0.383536 0.43607594 10 0.769383 0.378165 0.3912174 6.0959e-35 1.0000e+00 hypermethylated 3.0480e-32 1.0000e+00 hypermethylated 8.9939e-13 1.0000e+00 hypermethylated 4.4970e-10 1.00000000 hypermethylated 0.3774761 0.00300518 weaklyHypermeth 0.107328 insignificant 0.8073165 0.7920673 0.0283820 5 0.769383 0.817120 -0.04773758 8.4242e-01 7.1267e-03 inconclusive 1.0000e+00 0.548211 insignificant 0.93219287 1.3806e-03 inconclusive 1.000000 0.238172 insignificant -0.0962952 0.06757009 lowCoverage 1.00000 lowCoverage 0.8134364 0.383536 0.4437391 10 0.766805 0.378165 0.3886392 2.0238e-24 1.0000e+00 hypermethylated 5.0596e-22 1.0000000 hypermethylated 4.2171e-13 1.0000e+00 hypermethylated 4.2171e-10 1.000000 hypermethylated 0.3997317 0.0020281 weaklyHypermeth 0.081122 weaklyHypermeth 0.8134364 0.7920673 1.3081e-02 5 0.766805 0.817120 -0.05031574 6.9929e-01 3.0527e-02 inconclusive 1.0000e+00 1.000000 insignificant 9.4264e-01 0.0231903 inconclusive 1.000000 1 insignificant -0.0740397 0.1549472 lowCoverage 1.00000 lowCoverage 0.383536 0.7920673 -0.45748776 5 0.378165 0.817120 -0.43895498 1.0000e+00 2.0884e-15 hypomethylated 1.0000e+00 1.0442e-12 hypomethylated 1.0000e+00 1.5472e-09 hypomethylated 1.000000 1.5472e-06 hypomethylated -0.4737714 0.00067404 lowCoverage 0.056170 lowCoverage chr1 201562716 201563716 4114 ENSG00000202300 0.055742 949 25 0.038965 884 28 0.0510197 951 26 0.052234 1085 21 0.0318780 558 24 0.138280 1553 29 0.054662 949 28 0.0493861 739 25 0.0719339 945 24 0.033337 875 23 0.020037 727 25 0.021653 1006 25 0.047864 971 24 0.0295283 199 14 0.0129930 1100 25 0.0115351 880 26 0.0244724 821 24 0.013711 1073 20 0.0448368 469 24 0.099618 990 28 0.060404 277 22 0.066444 880 24 0.070262 934 30 0.032581 589 28 0.097525 568 21 0.084498 1172 27 0.032430 686 27 0.056151 371 25 0.0422330 590 24 0.050799 1143 27 0.030095 964 30 0.097964 989 30 0.031786 673 29 0.0292081 515 26 0.090909 318 13 0.0097756 356 20 0.037074 387 26 0.0531291 756 29 0.050460 1254 24 0.0701047 992 25 0.070587 1161 21 0.102964 1060 20 0.045916 1121 24 0.033128 0.0230910 0.026247 0.025563 0.0237720 0.032588 0.0417149 0.041902 0.0141851 0.0269511 0.017698 0.0249930 0.0169808 0.0302885 0.0176950 0.0145134 0.0218809 0.021584 0.021416 0.034138 0.0342564 0.017684 0.020804 0.0207747 0.0304347 0.0246116 0.0333977 0.040612 0.023621 0.0235141 0.0086552 0.0399673 0.0121658 0.0091421 0.0043512 0.01347249 0.032318 0.0207620 0.011486 0.0174236 0.014793 0.0134469 0.034632 20 0.0260158 0.029470 1.3276e-04 28 0.0750165 0.058703 0.01631358 0.6189600 0.52659030 insignificant 1 1.000000 insignificant 0.43742 3.8130e-01 insignificant 1 1.000000 insignificant -0.01493100 0.13901555 insignificant 1.00000 insignificant 0.0259608 0.022629 0.00706963 28 0.046111 0.031226 0.0148850 1.1930e-05 9.5606e-01 weaklyHypermeth 2.4348e-04 1.0000e+00 weaklyHypermeth 4.3422e-05 9.9853e-01 weaklyHypermeth 1.9737e-03 1.00000000 weaklyHypermeth 0.0032040 0.81436631 insignificant 1.000000 insignificant 0.0255625 0.0200609 0.0036680 21 0.069076 0.081582 -0.01250595 3.4835e-01 9.8228e-01 insignificant 1.0000e+00 1.000000 insignificant 0.52642803 9.9919e-01 insignificant 1.000000 1.000000 insignificant -0.0228220 0.09729716 insignificant 1.00000 insignificant 0.0294728 0.022629 0.0080053 28 0.060537 0.031226 0.0293116 7.5054e-04 9.9409e-01 weaklyHypermeth 1.2940e-02 1.0000000 weaklyHypermeth 6.9459e-04 9.9863e-01 weaklyHypermeth 2.5726e-02 1.000000 weaklyHypermeth 0.0181350 0.2060453 insignificant 1.000000 insignificant 0.0283445 0.0198853 3.2252e-03 21 0.085817 0.051955 0.03386159 2.2962e-01 9.8389e-01 insignificant 1.0000e+00 1.000000 insignificant 4.4399e-01 0.9954199 insignificant 1.000000 1 insignificant -0.0078910 0.5373339 insignificant 1.00000 insignificant 0.022222 0.0198889 -0.00474694 21 0.029974 0.053687 -0.02371292 9.9988e-01 3.8239e-02 weaklyHypometh 1.0000e+00 5.1673e-01 insignificant 9.9998e-01 1.3931e-01 insignificant 1.000000 1.0000e+00 insignificant -0.0260260 0.12004496 insignificant 1.000000 insignificant chr1 201873016 201874016 4122 ATP2B4 ENSG00000058668 0.756548 145 5 0.804524 76 5 0.6443860 69 5 0.850000 81 5 0.5923077 42 3 0.880478 153 5 0.753669 116 5 0.7521978 56 5 0.6305556 49 5 0.701667 47 5 0.846156 102 5 0.605714 59 5 0.857273 60 5 NA 0 0 0.8446154 68 5 0.6484848 39 3 0.7816176 62 5 0.841429 112 5 0.6768519 62 3 0.860905 116 5 0.877778 35 4 0.985714 64 5 0.826382 120 5 0.762778 43 5 0.909524 32 5 0.857381 87 5 0.867668 56 5 1.000000 32 4 0.9100000 51 5 0.835714 78 5 0.898904 93 5 0.833294 206 5 0.762589 85 5 0.6650000 61 5 0.861667 45 5 0.8271709 60 5 0.788516 49 5 0.8075630 71 5 0.827689 129 5 0.8815043 184 5 0.914067 147 5 0.864381 179 5 0.875272 142 5 0.757868 0.8035926 0.645048 0.846746 0.6217569 0.883852 0.7521937 0.754438 0.6329717 0.7024655 0.844252 0.6086221 0.8616192 NA 0.8490669 0.6584185 0.7763009 0.842054 0.686555 0.858106 0.8767258 0.987320 0.832304 0.7576594 0.9092702 0.8569315 0.8722587 1.000000 0.911243 0.8405008 0.9001207 0.8337757 0.7661344 0.6623767 0.8689349 0.82860126 0.788075 0.8139824 0.827058 0.8808223 0.915408 0.8638667 0.881713 5 0.7701453 0.860647 -8.1575e-02 5 0.7908009 0.865691 -0.07488963 0.9998887 0.00006959 weaklyHypometh 1 0.069591 weaklyHypometh 1.00000 1.8840e-06 weaklyHypometh 1 0.001884 weaklyHypometh -0.12625026 0.00018894 lowCoverage 0.18894 lowCoverage 0.7701453 0.776280 0.00300421 5 0.790801 0.782759 0.0080418 1.9004e-01 5.4525e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.6968e-01 4.2137e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0312399 0.39714523 lowCoverage 1.000000 lowCoverage 0.7701453 0.8501921 -0.0881915 5 0.790801 0.870460 -0.07965939 9.9870e-01 2.8244e-03 weaklyHypometh 1.0000e+00 0.297013 insignificant 0.99984088 3.9332e-04 weaklyHypometh 1.000000 0.196659 insignificant -0.1184048 0.00020400 lowCoverage 0.05100 lowCoverage 0.8606466 0.776280 0.0830528 5 0.865691 0.782759 0.0829315 3.8153e-04 9.9903e-01 weaklyHypermeth 7.3372e-03 1.0000000 weaklyHypermeth 8.3114e-04 9.9953e-01 weaklyHypermeth 2.8080e-02 1.000000 weaklyHypermeth 0.0950104 0.0184922 lowCoverage 0.393451 lowCoverage 0.8606466 0.8501921 -4.5503e-03 5 0.865691 0.870460 -0.00476975 7.2235e-01 6.6672e-01 insignificant 1.0000e+00 1.000000 insignificant 4.1737e-01 0.8648998 insignificant 1.000000 1 insignificant 0.0078455 0.7464230 lowCoverage 1.00000 lowCoverage 0.776280 0.8501921 -0.08789410 5 0.782759 0.870460 -0.08770123 9.9941e-01 1.4168e-03 weaklyHypometh 1.0000e+00 3.2948e-02 weaklyHypometh 9.9991e-01 5.8419e-03 weaklyHypometh 1.000000 1.7703e-01 insignificant -0.0871649 0.02524531 weaklyHypometh 0.536566 insignificant chr1 201897816 201898816 4126 ENSG00000217902 0.869076 237 7 0.721861 92 7 0.7061355 130 7 0.862344 138 4 0.7869987 144 7 0.811746 239 7 0.808473 157 7 0.7587079 129 7 0.7771894 123 7 0.903494 161 7 0.737076 246 7 0.797902 71 7 0.823579 177 7 0.9335498 46 6 0.7453375 139 7 0.6709580 91 5 0.9072692 133 4 0.807748 156 4 0.7882194 103 7 0.782612 219 7 0.758333 46 4 0.781006 69 7 0.800255 131 7 0.781764 72 7 0.699286 71 4 0.770865 137 7 0.795238 39 6 0.791837 49 4 0.7886582 142 7 0.806458 179 7 0.837425 164 7 0.804093 310 7 0.754018 101 7 0.6699955 99 7 0.833333 37 2 0.6945028 53 4 0.728233 112 7 0.7826152 150 7 0.789732 170 7 0.8419164 182 5 0.919963 132 4 0.775866 149 7 0.758030 199 7 0.869940 0.7342478 0.709801 0.836440 0.7974265 0.780270 0.8134625 0.766744 0.7285560 0.8726820 0.745848 0.7808457 0.8321928 0.9239087 0.7621851 0.7218099 0.8573850 0.807150 0.790546 0.824575 0.8328235 0.773768 0.827211 0.7996796 0.7275330 0.7939273 0.8118943 0.783952 0.796793 0.8156459 0.8520939 0.8239771 0.7638140 0.6522517 0.8656388 0.71495746 0.693244 0.7990546 0.829123 0.8532854 0.882483 0.8196518 0.778182 4 0.7922211 0.808375 -1.1113e-02 7 0.7974677 0.798636 -0.00116781 0.7417356 0.26359722 insignificant 1 1.000000 insignificant 0.53437 3.7205e-01 insignificant 1 1.000000 insignificant 0.01541247 0.40455329 insignificant 1.00000 insignificant 0.7922211 0.733696 0.06160035 7 0.797468 0.736073 0.0613947 6.1326e-04 9.9268e-01 weaklyHypermeth 9.5822e-03 1.0000e+00 weaklyHypermeth 1.1203e-02 9.6401e-01 weaklyHypermeth 1.9655e-01 1.00000000 insignificant 0.0562311 0.08129823 insignificant 1.000000 insignificant 0.7922211 0.8161058 -0.0290793 7 0.797468 0.798418 -0.00094982 3.5481e-01 5.0813e-02 insignificant 1.0000e+00 1.000000 insignificant 0.85892306 2.1942e-02 weaklyHypometh 1.000000 1.000000 insignificant -0.0170876 0.62298479 insignificant 1.00000 insignificant 0.8083747 0.733696 0.0763720 7 0.798636 0.736073 0.0625625 2.8091e-04 9.7842e-01 weaklyHypermeth 5.5081e-03 1.0000000 weaklyHypermeth 1.2981e-02 9.1581e-01 weaklyHypermeth 2.2774e-01 1.000000 insignificant 0.0408186 0.1651079 insignificant 1.000000 insignificant 0.8083747 0.8161058 -7.9252e-03 7 0.798636 0.798418 0.00021799 3.3911e-01 1.1916e-01 insignificant 1.0000e+00 1.000000 insignificant 8.6014e-01 0.0220999 weaklyHypometh 1.000000 1 insignificant -0.0325000 0.3408476 insignificant 1.00000 insignificant 0.733696 0.8161058 -0.08677830 7 0.736073 0.798418 -0.06234448 9.1778e-01 5.5377e-05 weaklyHypometh 1.0000e+00 1.8213e-03 weaklyHypometh 9.4598e-01 7.2235e-04 weaklyHypometh 1.000000 3.6117e-02 weaklyHypometh -0.0733186 0.08898842 insignificant 1.000000 insignificant chr1 202701016 202702016 4152 PIK3C2B ENSG00000133056 0.890920 320 6 0.834767 476 6 0.7331072 78 4 0.939603 256 5 0.8415344 93 6 0.870467 707 6 0.735722 121 5 0.8732847 174 5 0.8273324 89 5 0.802000 44 2 0.873982 259 6 0.666667 35 4 0.924082 71 4 0.9595517 85 5 0.8521825 81 4 0.9583333 35 3 0.5000000 4 0 0.953806 262 3 0.8832203 281 4 0.834895 322 5 0.803568 88 6 1.000000 3 0 0.689929 217 6 0.814306 76 6 0.690476 33 3 0.711522 353 6 0.771111 70 3 0.952381 39 3 0.7113654 226 6 0.889964 450 6 0.905747 447 5 0.867602 358 6 0.626813 226 6 0.7316248 170 6 0.655405 89 2 1.0000000 5 1 0.671665 195 6 0.6478581 457 6 0.759526 316 5 0.8741744 352 5 0.868170 236 5 0.946267 277 3 0.985093 188 5 0.873717 0.8306774 0.857077 0.924619 0.8188514 0.890738 0.7896344 0.949249 0.8280326 0.9118054 0.922307 0.9138577 0.9262460 0.8966424 0.8876404 0.8202247 NA 0.907433 0.930224 0.875109 0.9008139 0.984778 0.852858 0.8194564 0.9868914 0.9266237 0.8274157 0.794543 0.806153 0.9158327 0.9414314 0.9237057 0.6533042 0.8743380 0.6779403 NA 0.751942 0.5857139 0.929119 0.9118372 0.898433 0.9592922 0.952809 1 0.8784603 0.891009 -1.2517e-02 6 0.9077706 0.693825 0.21394604 0.8191034 0.53194538 insignificant 1 1.000000 insignificant 0.75108 8.9221e-01 insignificant 1 1.000000 insignificant 0.02044187 0.60965090 lowCoverage 1.00000 lowCoverage 0.8783320 0.687117 0.20376987 6 0.868244 0.696275 0.1719687 4.3924e-18 7.9605e-01 hypermethylated 3.6603e-16 1.0000e+00 hypermethylated 4.6060e-05 9.4129e-01 hypermethylated 2.0026e-03 1.00000000 hypermethylated 0.1155452 0.10740049 lowCoverage 1.000000 lowCoverage 0.8783641 0.9203216 -0.0288262 5 0.884713 0.778568 0.10614555 6.0771e-01 8.1694e-02 insignificant 1.0000e+00 1.000000 insignificant 0.63502665 3.4398e-01 insignificant 1.000000 1.000000 insignificant -0.0488732 0.32000368 lowCoverage 1.00000 lowCoverage 0.8916277 0.687117 0.1969748 6 0.776892 0.696275 0.0806173 2.7601e-10 8.4034e-01 weaklyHypermeth 1.2000e-08 1.0000000 weaklyHypermeth 9.4844e-04 9.4935e-01 weaklyHypermeth 2.9639e-02 1.000000 weaklyHypermeth 0.0951034 0.1823457 lowCoverage 1.000000 lowCoverage 0.8904924 0.9203798 -2.4433e-02 5 0.604250 0.803171 -0.19892178 9.8284e-01 1.5807e-01 insignificant 1.0000e+00 1.000000 insignificant 9.7841e-01 0.4485282 insignificant 1.000000 1 insignificant -0.0693151 0.1928281 lowCoverage 1.00000 lowCoverage 0.687117 0.9209949 -0.22916607 5 0.696275 0.889792 -0.19351669 1.0000e+00 1.1158e-06 hypomethylated 1.0000e+00 5.3134e-05 hypomethylated 9.9999e-01 4.1545e-03 weaklyHypometh 1.000000 1.3259e-01 insignificant -0.1644184 0.04343905 lowCoverage 0.748949 lowCoverage chr1 202729616 202730616 4154 PIK3C2B ENSG00000133056 0.045366 884 34 0.025994 784 36 0.0422469 853 36 0.039855 506 15 0.0353573 565 28 0.058022 1343 43 0.024756 743 28 0.0583433 613 29 0.0081737 543 29 0.041522 608 30 0.045705 646 28 0.039464 668 29 0.046701 649 24 0.0000000 113 3 0.0468258 753 29 0.0371218 565 29 0.0501526 394 22 0.026146 680 28 0.0456683 723 39 0.048229 703 36 0.069347 401 28 0.024220 229 22 0.078909 721 46 0.017353 532 29 0.044643 116 5 0.022476 1454 46 0.019504 625 27 0.041760 239 18 0.0039441 486 28 0.023160 1351 46 0.021016 1254 46 0.018198 1065 34 0.027175 551 32 0.0048469 401 28 0.047569 867 37 0.0277778 778 27 0.048733 326 22 0.0233482 967 46 0.009703 954 36 0.0379641 877 34 0.018908 479 27 0.016755 899 33 0.037116 693 33 0.010089 0.0019659 0.014819 0.019659 0.0027440 0.016059 0.0058532 0.018049 0.0029610 0.0127306 0.015796 0.0071974 0.0082057 0.0090951 0.0136085 0.0097543 0.0081528 0.011187 0.012363 0.021281 0.0373420 0.028662 0.024747 0.0084483 0.0268676 0.0013611 0.0153373 0.048385 0.006159 0.0035218 0.0069665 0.0044378 0.0059482 0.0052893 0.0046855 0.00000000 0.043640 0.0063916 0.013639 0.0030838 0.017600 0.0036732 0.019061 7 0.0198710 0.022784 -6.4081e-05 38 0.0570556 0.044255 0.01280107 0.8024237 0.91579822 insignificant 1 1.000000 insignificant 0.96584 8.7730e-01 insignificant 1 1.000000 insignificant 0.00623829 0.40419642 insignificant 1.00000 insignificant 0.0198740 0.014910 0.00244475 38 0.058174 0.060834 -0.0026599 9.8855e-01 1.0000e+00 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9487e-01 1.0000e+00 insignificant 1.0000e+00 1.00000000 insignificant 0.0083741 0.29743417 insignificant 1.000000 insignificant 0.0141559 0.0071758 0.0029221 34 0.039043 0.039755 -0.00071151 8.9264e-01 9.9994e-01 insignificant 1.0000e+00 1.000000 insignificant 0.90543334 1.0000e+00 insignificant 1.000000 1.000000 insignificant 0.0141933 0.06851541 insignificant 1.00000 insignificant 0.0227863 0.014910 0.0036532 46 0.045122 0.060834 -0.0157119 9.9259e-01 1.0000e+00 insignificant 1.0000e+00 1.0000000 insignificant 9.7993e-01 1.0000e+00 insignificant 1.0000e+00 1.000000 insignificant 0.0021358 0.8223591 insignificant 1.000000 insignificant 0.0221985 0.0071758 1.4363e-03 34 0.038518 0.039755 -0.00123707 9.0508e-01 1.0000e+00 insignificant 1.0000e+00 1.000000 insignificant 9.4643e-01 1.0000000 insignificant 1.000000 1 insignificant 0.0079550 0.3734813 insignificant 1.00000 insignificant 0.014698 0.0071795 0.00045956 34 0.044735 0.040601 0.00413427 1.0000e+00 1.0000e+00 insignificant 1.0000e+00 1.0000e+00 insignificant 1.0000e+00 1.0000e+00 insignificant 1.000000 1.0000e+00 insignificant 0.0058192 0.52512222 insignificant 1.000000 insignificant chr1 203464816 203465816 4174 TMCC2 ENSG00000133069 0.615779 263 9 0.635099 225 6 0.5251984 94 9 0.570588 211 9 0.4460160 98 9 0.489894 652 9 0.403702 125 9 0.5176367 154 9 0.4611044 148 9 0.712169 56 7 0.626595 237 9 0.379286 52 5 0.474709 155 9 0.5058261 55 5 0.6190959 94 9 0.4000000 35 3 0.3055556 17 1 0.425189 179 6 0.5155361 125 5 0.569448 500 9 0.618464 65 5 0.430556 110 8 0.541229 105 7 0.403125 84 7 0.577778 54 6 0.436391 176 9 0.655531 110 7 0.372619 46 2 0.5473623 105 6 0.462090 220 9 0.518516 235 9 0.509273 527 10 0.271450 196 9 0.1050061 57 6 0.381014 159 9 0.5277778 26 3 0.202710 157 9 0.4521188 247 9 0.437850 268 6 0.4212335 236 6 0.501924 222 6 0.473053 95 6 0.372168 145 6 0.499043 0.5022483 0.541569 0.584306 0.5221959 0.483692 0.4726108 0.502714 0.5351152 0.5516636 0.592584 0.4025069 0.5320539 0.3847194 0.6541771 0.3665865 0.5327740 0.537454 0.515787 0.525234 0.6923737 0.528177 0.443758 0.5302484 0.6175214 0.4777140 0.6112744 0.377747 0.540546 0.5446654 0.4782850 0.4985547 0.3777681 0.1743977 0.3582919 0.50995186 0.343194 0.4863481 0.511674 0.5283946 0.568962 0.5251390 0.548969 4 0.5162590 0.512793 1.8803e-02 9 0.5330775 0.461572 0.07150589 0.0170994 0.98406437 weaklyHypermeth 1 1.000000 insignificant 0.21334 8.2296e-01 insignificant 1 1.000000 insignificant 0.00384361 0.91097900 insignificant 1.00000 insignificant 0.5162590 0.336105 0.19889112 9 0.533077 0.402264 0.1308131 1.5153e-17 9.7676e-01 weaklyHypermeth 1.1656e-15 1.0000e+00 weaklyHypermeth 2.9674e-06 9.9823e-01 weaklyHypermeth 2.2811e-04 1.00000000 weaklyHypermeth 0.1865753 0.03354731 weaklyHypermeth 0.694137 insignificant 0.5163437 0.4958592 -0.0329750 6 0.514693 0.415536 0.09915738 7.5303e-11 6.1527e-02 inconclusive 1.5061e-08 1.000000 inconclusive 0.02206851 4.6482e-02 weaklyHypometh 1.000000 1.000000 insignificant 0.0686757 0.04949188 weaklyHypermeth 1.00000 insignificant 0.5127926 0.336105 0.1799619 9 0.461572 0.402264 0.0593072 1.8699e-10 6.6454e-01 weaklyHypermeth 8.7108e-09 1.0000000 weaklyHypermeth 6.1344e-06 9.8882e-01 weaklyHypermeth 3.8554e-04 1.000000 weaklyHypermeth 0.1827317 0.0364027 weaklyHypermeth 0.686844 insignificant 0.5145524 0.4958592 -3.3972e-02 6 0.495156 0.415536 0.07962015 3.3360e-06 1.2856e-01 inconclusive 4.7657e-04 1.000000 inconclusive 4.0923e-02 0.2800049 inconclusive 1.000000 1 insignificant 0.0648321 0.0759103 insignificant 1.00000 insignificant 0.335714 0.4958592 -0.14676777 6 0.382717 0.415536 -0.03281836 8.1520e-01 9.0277e-03 weaklyHypometh 1.0000e+00 1.5046e-01 insignificant 9.7560e-01 1.6535e-03 weaklyHypometh 1.000000 6.6142e-02 weaklyHypometh -0.1178996 0.13569233 insignificant 1.000000 insignificant chr1 203485016 203486016 4176 TMCC2 ENSG00000133069 0.846122 84 6 0.565278 70 6 0.4111722 40 4 0.930159 72 6 0.9090909 11 1 0.847463 204 6 0.791667 23 1 0.8057143 113 6 0.8888889 16 1 0.916667 34 4 0.828230 307 6 0.611111 8 0 0.876448 121 6 0.8823052 71 6 0.9444444 25 1 1.0000000 1 0 0.5000000 4 0 0.659259 126 6 0.8779386 203 6 0.873731 77 4 0.878571 55 5 0.654683 83 6 0.818296 34 1 0.707653 53 6 0.804029 39 2 0.726002 173 6 0.770270 102 6 0.800000 12 1 0.9097007 191 6 0.877997 173 6 0.790963 141 6 0.868652 118 6 0.556914 111 6 0.5616497 141 6 0.965909 46 4 0.7500000 10 0 0.494338 74 6 0.5864639 278 6 0.628205 27 1 0.6127651 94 6 0.746825 48 3 0.666667 22 1 0.659722 45 3 0.874675 0.6666667 0.476399 0.993939 0.8932444 0.894738 0.7272727 0.983636 0.9848485 0.9772727 0.952288 0.5151515 0.9088214 0.8088843 0.9848485 0.9758890 0.9758890 0.938228 0.994153 0.826923 0.7636364 0.867832 0.881579 0.9090909 0.9755245 0.8562871 0.6779189 1.000000 0.736689 0.9554637 0.9280091 0.8428230 0.6576151 0.7387716 0.7924339 0.46185540 0.548951 0.8650778 0.744755 0.8878279 0.684199 0.9545455 0.886364 0 0.8453416 0.853117 -1.0973e-02 6 0.7953495 0.780741 0.01460799 0.6736501 0.62914762 insignificant 1 1.000000 insignificant 0.36954 7.5782e-01 insignificant 1 1.000000 insignificant -0.00228372 0.95733926 lowCoverage 1.00000 lowCoverage 0.8453416 0.555387 0.30895476 6 0.795349 0.565528 0.2298218 3.4411e-10 7.8772e-01 hypermethylated 1.1866e-08 1.0000e+00 hypermethylated 1.1873e-04 8.4547e-01 hypermethylated 4.7492e-03 1.00000000 hypermethylated 0.1457387 0.10845506 lowCoverage 1.000000 lowCoverage 0.8453416 0.7076271 0.1461437 3 0.795349 0.601282 0.19406784 1.2370e-05 9.9566e-01 lowCoverage 1.2682e-03 1.000000 lowCoverage 0.00286619 9.8020e-01 lowCoverage 0.204728 1.000000 lowCoverage 0.1354475 0.00471738 lowCoverage 0.36288 lowCoverage 0.8534923 0.554545 0.3346054 6 0.808149 0.494837 0.3133121 2.5014e-13 8.0965e-01 hypermethylated 1.6676e-11 1.0000000 hypermethylated 6.2798e-04 7.3489e-01 hypermethylated 2.5119e-02 1.000000 hypermethylated 0.1480225 0.0964785 lowCoverage 1.000000 lowCoverage 0.8531170 0.7076271 1.5670e-01 3 0.780741 0.601282 0.17945985 1.6613e-07 9.9270e-01 lowCoverage 3.3226e-05 1.000000 lowCoverage 6.0968e-03 0.9410898 lowCoverage 0.435485 1 lowCoverage 0.1377312 0.0012271 lowCoverage 0.20695 lowCoverage 0.555387 0.7076271 -0.14031931 3 0.565528 0.601282 -0.03575400 7.2789e-02 2.2149e-03 lowCoverage 1.0000e+00 4.6143e-02 lowCoverage 6.6015e-01 4.8326e-02 lowCoverage 1.000000 7.9321e-01 lowCoverage -0.0102912 0.89592213 lowCoverage 1.000000 lowCoverage chr1 204794978 204795978 4228 ENSG00000218386 0.544426 351 6 0.503610 224 6 0.5996641 119 6 0.464620 272 6 0.4679358 86 6 0.526884 376 6 0.362011 123 6 0.4636389 154 6 0.6000690 170 6 0.457431 124 6 0.577376 251 6 0.403671 52 4 0.382686 197 6 0.2451299 69 4 0.4773201 149 6 0.3931624 22 1 0.2785859 51 5 0.481970 374 6 0.5100808 158 6 0.326641 301 6 0.452489 45 5 0.300313 212 6 0.574914 191 6 0.371123 116 5 0.541513 196 6 0.282828 256 6 0.479252 125 6 0.505556 59 6 0.4602675 159 6 0.438734 297 6 0.421647 302 6 0.697941 198 6 0.328285 232 6 0.3799417 176 6 0.508012 193 4 0.3832226 74 5 0.360002 172 6 0.4591562 226 6 0.328486 329 6 0.4639747 309 6 0.251582 320 6 0.339163 392 6 0.366313 335 6 0.458733 0.4847213 0.575529 0.428803 0.4281287 0.474389 0.3652649 0.431075 0.4956189 0.4353304 0.535595 0.3512648 0.3229946 0.2291967 0.4000321 0.4026063 0.3336879 0.439546 0.461554 0.262779 0.4210518 0.268299 0.541453 0.3969822 0.5177476 0.2814953 0.4564167 0.462689 0.382384 0.3674478 0.3699134 0.6688599 0.2749018 0.3267704 0.5650328 0.36535143 0.315598 0.5400839 0.252108 0.4062337 0.203420 0.2600190 0.317456 6 0.4385189 0.445269 -1.9117e-03 6 0.5384675 0.392454 0.14601374 0.7102158 0.37952196 insignificant 1 1.000000 insignificant 0.85709 3.5823e-01 insignificant 1 1.000000 insignificant -0.00720241 0.85889771 insignificant 1.00000 insignificant 0.4383637 0.389925 0.03711002 6 0.461545 0.406651 0.0548943 2.9833e-03 6.8036e-01 weaklyHypermeth 4.2619e-02 1.0000e+00 weaklyHypermeth 2.7955e-02 8.5556e-01 weaklyHypermeth 4.3680e-01 1.00000000 insignificant 0.0502424 0.17974677 insignificant 1.000000 insignificant 0.4383637 0.2237389 0.1502645 6 0.461545 0.351755 0.10979084 3.4745e-06 9.5444e-01 weaklyHypermeth 4.3431e-04 1.000000 weaklyHypermeth 0.00012561 9.8739e-01 weaklyHypermeth 0.025121 1.000000 weaklyHypermeth 0.1034420 0.03602187 weaklyHypermeth 0.95935 insignificant 0.4454756 0.389925 0.0474941 6 0.457863 0.406651 0.0512117 7.8976e-03 4.8639e-01 weaklyHypermeth 1.0125e-01 1.0000000 insignificant 1.6972e-02 5.4240e-01 weaklyHypermeth 2.7822e-01 1.000000 insignificant 0.0574449 0.2016627 insignificant 1.000000 insignificant 0.4454756 0.2237389 1.3963e-01 6 0.457863 0.351755 0.10610815 2.2005e-03 9.9677e-01 weaklyHypermeth 9.1686e-02 1.000000 weaklyHypermeth 2.2592e-03 0.9969311 weaklyHypermeth 0.205383 1 insignificant 0.1106444 0.0400339 weaklyHypermeth 1.00000 insignificant 0.389925 0.2237389 0.08525802 6 0.406651 0.351755 0.05489650 5.3876e-02 3.7893e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.3495e-01 5.8293e-01 insignificant 1.000000 1.0000e+00 insignificant 0.0531995 0.25975633 insignificant 1.000000 insignificant chr1 204911178 204912178 4235 DYRK3 ENSG00000143479 0.795166 277 8 0.710035 153 8 0.6092582 168 8 0.738552 163 8 0.6313165 81 5 0.783034 243 8 0.646378 115 8 0.7169048 123 7 0.6003211 99 6 0.747301 101 8 0.720991 261 8 0.650167 99 6 0.779177 142 7 0.5912698 18 2 0.7551693 125 7 0.7904221 87 6 0.6447044 114 6 0.580707 154 6 0.8088499 134 8 0.765297 200 8 0.760703 76 6 0.802557 56 5 0.836599 191 6 0.820107 91 6 0.877249 41 5 0.776371 184 8 0.863676 114 6 0.582103 98 8 0.7912529 92 6 0.754418 185 8 0.794370 126 8 0.847664 248 8 0.644807 117 7 0.6753791 154 8 0.580069 169 8 0.7839506 46 6 0.694752 118 7 0.6327974 190 8 0.797954 235 9 0.7588223 246 9 0.590539 209 9 0.873624 240 6 0.710808 227 8 0.837973 0.7310300 0.752422 0.832134 0.7830729 0.826108 0.7070088 0.804116 0.6829161 0.7768433 0.817395 0.6803087 0.8206358 0.7966851 0.8188868 0.8170446 0.7324305 0.832134 0.784794 0.819502 0.8251890 0.693574 0.801782 0.7859405 0.8466637 0.8452111 0.7492386 0.774922 0.837093 0.7983643 0.7999766 0.8023461 0.7706065 0.6533516 0.6598109 0.81323581 0.751440 0.6752226 0.800380 0.8742998 0.714837 0.9372727 0.862427 4 0.7686384 0.777630 -1.1070e-02 8 0.6311343 0.758944 -0.12781010 0.9376338 0.03994228 weaklyHypometh 1 1.000000 insignificant 0.99482 3.2165e-03 weaklyHypometh 1 0.643291 insignificant -0.08900463 0.00419365 weaklyHypometh 1.00000 insignificant 0.7686384 0.702771 0.06967863 8 0.631134 0.619357 0.0117775 1.2791e-01 9.8570e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.2600e-01 9.5284e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0346251 0.32007822 insignificant 1.000000 insignificant 0.7686384 0.7856525 -0.0460991 8 0.631134 0.651261 -0.02012637 9.9755e-01 1.4516e-01 insignificant 1.0000e+00 1.000000 insignificant 0.99974851 2.5613e-01 insignificant 1.000000 1.000000 insignificant -0.0430986 0.42912951 insignificant 1.00000 insignificant 0.7776298 0.702771 0.0792006 8 0.758944 0.619357 0.1395876 3.1161e-02 9.9842e-01 weaklyHypermeth 3.5377e-01 1.0000000 insignificant 1.5364e-02 9.9794e-01 weaklyHypermeth 2.6040e-01 1.000000 insignificant 0.1236298 0.0052869 weaklyHypermeth 0.164144 insignificant 0.7776298 0.7856525 -3.3683e-02 8 0.758944 0.651261 0.10768373 1.9427e-01 4.0501e-01 insignificant 1.0000e+00 1.000000 insignificant 3.2273e-01 0.8091298 insignificant 1.000000 1 insignificant 0.0459061 0.4134515 insignificant 1.00000 insignificant 0.702771 0.7856525 -0.11522268 8 0.619357 0.651261 -0.03190383 9.9296e-01 1.5506e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9994e-01 5.9931e-02 insignificant 1.000000 9.3643e-01 insignificant -0.0777237 0.20210635 insignificant 1.000000 insignificant chr1 204957678 204958678 4244 ENSG00000216783 0.714219 87 5 0.761696 56 5 0.5692308 44 5 0.723077 91 5 0.7333333 66 5 0.666667 58 3 0.556522 67 5 0.6666667 66 5 0.5960784 52 5 0.806667 39 5 0.612897 111 5 0.833333 36 2 0.730769 76 5 0.8257143 61 5 0.6095238 74 5 0.6090909 34 2 0.7500000 4 0 0.830997 88 5 0.6476190 22 3 0.844444 39 3 0.916667 14 2 0.500000 6 0 0.753684 53 5 0.811905 40 5 0.652930 49 5 0.810606 69 3 0.586111 45 5 0.600000 27 2 0.7120370 70 5 0.682425 50 3 0.848788 46 5 0.601852 35 3 0.705517 99 5 0.7777778 58 5 0.681818 81 5 0.6666667 3 0 0.689841 63 5 0.8269231 47 3 0.605219 73 5 0.7093750 67 5 0.805630 79 5 0.771429 51 2 0.815789 65 5 0.714219 0.7140351 0.569231 0.723077 0.7333333 0.700000 0.5565217 0.800000 0.5960784 0.8066667 0.735476 0.7138150 0.7307692 0.8257143 0.6095238 0.6090909 0.6804816 0.779596 0.647619 0.813333 0.8003466 0.631997 0.753684 0.7742857 0.5835165 0.7727273 0.7033333 0.600000 0.704444 0.8189103 0.8487879 0.6222222 0.7055170 0.7333333 0.7181818 0.73657348 0.689841 0.8269231 0.726263 0.7350000 0.805630 0.7714286 0.778947 0 0.7570573 0.725100 2.1488e-03 5 0.7058064 0.714366 -0.00855930 0.6895326 0.71959927 insignificant 1 1.000000 insignificant 0.82006 6.6425e-01 insignificant 1 1.000000 insignificant -0.00198982 0.96251073 lowCoverage 1.00000 lowCoverage 0.7570573 0.715100 0.01694101 5 0.705806 0.702781 0.0030257 2.2051e-01 5.8143e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.9476e-01 1.9998e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0203300 0.55338392 lowCoverage 1.000000 lowCoverage 0.7570573 0.7957958 -0.0319157 5 0.705806 0.745687 -0.03988027 9.5984e-01 2.3685e-01 insignificant 1.0000e+00 1.000000 insignificant 0.98761768 1.7275e-01 insignificant 1.000000 1.000000 insignificant -0.0370610 0.43090104 lowCoverage 1.00000 lowCoverage 0.7250996 0.715100 0.0154405 5 0.714366 0.702781 0.0115850 2.8492e-01 6.2297e-01 insignificant 1.0000e+00 1.0000000 insignificant 7.2088e-01 2.6714e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0183402 0.6847897 lowCoverage 1.000000 lowCoverage 0.7261905 0.7934132 -3.2990e-02 5 0.755171 0.639160 0.11601059 9.7454e-01 4.9189e-01 insignificant 1.0000e+00 1.000000 insignificant 9.0637e-01 0.4847808 insignificant 1.000000 1 insignificant -0.0350712 0.5216374 lowCoverage 1.00000 lowCoverage 0.715100 0.7957958 -0.04935493 5 0.702781 0.745687 -0.04290594 7.5554e-01 3.8755e-02 weaklyHypometh 1.0000e+00 5.1673e-01 insignificant 4.2393e-01 3.9735e-01 insignificant 1.000000 1.0000e+00 insignificant -0.0167310 0.73007630 lowCoverage 1.000000 lowCoverage chr1 205444678 205445678 4268 ENSG00000216816 0.689876 260 9 0.636677 171 8 0.7086655 142 8 0.797356 170 8 0.6744048 84 8 0.710206 392 8 0.634858 89 5 0.6165660 172 8 0.6912107 96 8 0.602141 103 8 0.639543 259 8 0.686706 86 8 0.739448 123 8 0.6666667 30 4 0.7241830 111 8 0.7361111 75 5 0.8789336 61 5 0.686616 166 8 0.6374668 152 8 0.616621 243 8 0.661012 62 6 0.801941 83 8 0.662856 121 8 0.598214 54 6 0.719841 69 7 0.710598 249 8 0.706305 62 7 0.594797 40 3 0.6670533 117 8 0.698131 206 8 0.686522 200 8 0.747621 348 8 0.494634 147 8 0.6162298 121 8 0.619191 191 8 0.7858894 46 3 0.721528 92 8 0.5696710 175 8 0.574971 203 8 0.7800415 215 8 0.684159 171 8 0.745078 135 6 0.758314 201 8 0.773062 0.6748621 0.731903 0.825723 0.7848162 0.759484 0.6431569 0.721475 0.7285053 0.8045821 0.780208 0.7109510 0.7484763 0.7426768 0.7773879 0.7496954 0.8430957 0.751151 0.783440 0.763519 0.7714808 0.793486 0.743956 0.6418129 0.8789787 0.7853875 0.7342438 0.717610 0.742202 0.7566361 0.7522832 0.7483535 0.5500426 0.5864684 0.6705747 0.82983808 0.782383 0.7220825 0.725556 0.8284448 0.750991 0.8170518 0.808391 4 0.7219430 0.740534 -1.4078e-02 8 0.6857861 0.703059 -0.01727339 0.8129001 0.17053582 insignificant 1 1.000000 insignificant 0.59628 5.8764e-01 insignificant 1 1.000000 insignificant 0.00080516 0.97161478 insignificant 1.00000 insignificant 0.7219430 0.650259 0.07944739 8 0.685786 0.600328 0.0854585 4.4923e-05 8.0353e-01 weaklyHypermeth 8.4760e-04 1.0000e+00 weaklyHypermeth 7.2285e-02 8.7633e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0541891 0.27461281 insignificant 1.000000 insignificant 0.7219054 0.7502703 -0.0353395 8 0.678651 0.644305 0.03434582 7.9440e-01 2.2983e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 0.78848574 5.2925e-02 insignificant 1.000000 1.000000 insignificant -0.0197999 0.63911594 insignificant 1.00000 insignificant 0.7405338 0.650259 0.0963152 8 0.703059 0.600328 0.1027319 6.3073e-04 9.9459e-01 weaklyHypermeth 1.1263e-02 1.0000000 weaklyHypermeth 1.6386e-01 9.1888e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0533839 0.2853746 insignificant 1.000000 insignificant 0.7406716 0.7502703 -1.8149e-02 8 0.707103 0.644305 0.06279774 7.4757e-01 3.0675e-01 insignificant 1.0000e+00 1.000000 insignificant 8.6989e-01 0.1686684 insignificant 1.000000 1 insignificant -0.0206051 0.6307861 insignificant 1.00000 insignificant 0.651495 0.7502703 -0.11133116 8 0.629994 0.644305 -0.01431175 9.7400e-01 1.2612e-03 weaklyHypometh 1.0000e+00 3.0761e-02 weaklyHypometh 9.8065e-01 5.6713e-02 insignificant 1.000000 9.0021e-01 insignificant -0.0739890 0.22304595 insignificant 1.000000 insignificant chr1 206114178 206115178 4294 C1orf132 ENSG00000203709 0.594634 80 5 0.509891 99 6 0.6000000 33 6 0.631494 91 6 0.6332532 65 6 0.645469 120 6 0.538576 77 5 0.7004329 69 5 0.7261905 30 3 0.823129 26 2 0.703804 108 5 0.833333 26 0 0.630398 67 5 0.7121212 40 5 0.7414966 42 2 0.3809524 11 0 0.7500000 13 0 0.751614 85 5 0.6655844 39 3 0.674603 42 5 0.720000 17 2 1.000000 6 0 0.645468 62 5 0.789116 37 5 0.647452 63 5 0.543989 74 5 0.656136 53 5 0.791667 13 0 0.9372057 48 5 0.633088 65 5 0.816780 75 5 0.690741 51 5 0.592560 71 7 0.5629699 65 5 0.583289 70 5 0.5555556 36 1 0.688005 70 7 0.7040816 50 3 0.660197 82 6 0.6424597 110 6 0.602983 104 6 0.504135 47 2 0.712500 78 6 0.680680 0.6833844 0.769014 0.807757 0.7961809 0.795549 0.5627612 0.783269 0.7288732 0.7572099 0.876493 0.8779343 0.6908131 0.7240717 0.6552649 0.2112676 0.7405241 0.905143 0.744878 0.667561 0.7042254 0.949830 0.790030 0.8641851 0.7965689 0.8191689 0.7402943 0.774333 0.923232 0.7672949 0.8263420 0.8361502 0.6719316 0.7080377 0.7314905 0.68544601 0.777127 0.8138833 0.761366 0.8323262 0.758563 0.6462858 0.869366 0 0.7308024 0.765957 -2.7276e-02 5 0.6479562 0.612483 0.03547295 0.2105914 0.45623472 insignificant 1 1.000000 insignificant 0.79547 5.5480e-02 insignificant 1 1.000000 insignificant -0.07695457 0.10464258 lowCoverage 1.00000 lowCoverage 0.7308024 0.668508 0.03039120 5 0.647956 0.625043 0.0229128 1.4395e-01 6.3390e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.2526e-01 6.6523e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0479388 0.19986080 lowCoverage 1.000000 lowCoverage 0.7308024 0.7125891 -0.0209656 5 0.647956 0.637919 0.01003763 5.6017e-01 3.1919e-01 insignificant 1.0000e+00 1.000000 insignificant 0.49261159 2.6443e-01 insignificant 1.000000 1.000000 insignificant 0.0378938 0.39501738 lowCoverage 1.00000 lowCoverage 0.7659574 0.668508 0.0561339 5 0.612483 0.625043 -0.0125602 2.3402e-02 5.9456e-01 weaklyHypermeth 2.7212e-01 1.0000000 insignificant 1.6280e-02 9.3170e-01 weaklyHypermeth 2.7133e-01 1.000000 insignificant 0.1248933 0.0165077 lowCoverage 0.375176 lowCoverage 0.7659574 0.7125891 -1.6780e-03 5 0.612483 0.637919 -0.02543532 5.6175e-01 4.2279e-01 insignificant 1.0000e+00 1.000000 insignificant 4.2672e-01 0.8604040 insignificant 1.000000 1 insignificant 0.1148484 0.0456199 lowCoverage 1.00000 lowCoverage 0.668508 0.7125891 -0.05131771 5 0.625043 0.637919 -0.01287516 9.6448e-01 3.1119e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9574e-01 3.8501e-01 insignificant 1.000000 1.0000e+00 insignificant -0.0100450 0.82431206 lowCoverage 1.000000 lowCoverage chr1 208532478 208533478 4370 ENSG00000213038 0.109536 722 24 0.098615 953 28 0.0669931 1154 29 0.114493 621 20 0.0880024 822 24 0.149703 1463 27 0.121176 1041 24 0.1043973 918 25 0.0664358 1296 25 0.095139 1338 25 0.158297 949 25 0.112197 1172 24 0.126558 1041 26 0.1942701 366 14 0.0750789 1293 24 0.0190062 1146 24 0.1003114 852 18 0.058227 672 20 0.0846080 774 24 0.144916 862 21 0.136446 367 19 0.151032 471 22 0.065857 798 28 0.087265 606 23 0.081863 349 19 0.118058 1251 29 0.052404 652 22 0.159074 505 23 0.1036949 861 23 0.084243 1242 29 0.074790 1196 29 0.125109 900 28 0.013312 814 29 0.0449759 648 24 0.086271 676 18 0.0054299 184 15 0.051580 518 25 0.0094893 1069 29 0.137760 921 20 0.1293728 910 23 0.062760 665 22 0.112797 682 20 0.117787 571 22 0.046256 0.0327602 0.045149 0.055456 0.0480858 0.060642 0.0570251 0.030003 0.0237107 0.0448615 0.053592 0.0511594 0.0271352 0.0429739 0.0396549 0.0155490 0.0346123 0.032944 0.028547 0.048544 0.0472834 0.048601 0.042574 0.0421028 0.0314332 0.0388670 0.0321704 0.050230 0.031020 0.0398302 0.0328583 0.0439669 0.0137810 0.0177665 0.1384849 0.00819314 0.026096 0.0099864 0.042914 0.0504511 0.030359 0.0476198 0.061250 20 0.0563351 0.069254 -4.9022e-04 24 0.1226922 0.148041 -0.02534904 0.3585248 0.64758406 insignificant 1 1.000000 insignificant 0.29641 9.3188e-01 insignificant 1 1.000000 insignificant 0.00107827 0.93598722 insignificant 1.00000 insignificant 0.0562895 0.027117 0.04679428 24 0.099825 0.027886 0.0719395 1.3408e-11 9.9005e-01 weaklyHypermeth 6.3848e-10 1.0000e+00 weaklyHypermeth 2.5915e-07 9.9980e-01 weaklyHypermeth 2.5915e-05 1.00000000 weaklyHypermeth 0.0692218 0.00122582 weaklyHypermeth 0.058372 weaklyHypermeth 0.0537117 0.0552295 -0.0011907 20 0.084886 0.134563 -0.04967744 2.1609e-01 7.1852e-02 insignificant 1.0000e+00 1.000000 insignificant 0.29944897 4.0062e-01 insignificant 1.000000 1.000000 insignificant -0.0076975 0.63859181 insignificant 1.00000 insignificant 0.0690593 0.027117 0.0556214 27 0.111559 0.027886 0.0836733 3.3163e-10 9.6302e-01 weaklyHypermeth 1.3818e-08 1.0000000 weaklyHypermeth 1.5524e-04 9.9502e-01 weaklyHypermeth 7.0564e-03 1.000000 weaklyHypermeth 0.0681435 0.0015486 weaklyHypermeth 0.067079 weaklyHypermeth 0.0642434 0.0552295 -4.1055e-05 20 0.094703 0.134563 -0.03986045 5.9672e-01 2.2543e-01 insignificant 1.0000e+00 1.000000 insignificant 7.2567e-01 0.5849534 insignificant 1.000000 1 insignificant -0.0087758 0.6065177 insignificant 1.00000 insignificant 0.027027 0.0552295 -0.05709106 20 0.029544 0.134563 -0.10501901 9.6640e-01 3.7440e-08 weaklyHypometh 1.0000e+00 2.3400e-06 weaklyHypometh 9.9810e-01 7.5194e-03 weaklyHypometh 1.000000 2.0323e-01 insignificant -0.0769193 0.00244102 weaklyHypometh 0.116239 insignificant chr1 209755178 209756178 4404 RD3 ENSG00000198570 0.088628 1430 45 0.094747 1186 46 0.0962152 1032 36 0.064355 1281 37 0.0864582 942 47 0.148852 2872 37 0.122169 1367 47 0.1533959 1217 46 0.1401236 1737 44 0.078506 1731 36 0.143085 1246 47 0.141770 1874 44 0.067123 1714 44 0.0765082 771 32 0.0983325 1782 44 0.1061754 1747 42 0.0334680 1056 41 0.071058 1450 36 0.0546458 845 44 0.166650 1341 37 0.131650 463 33 0.036749 1242 36 0.076609 931 37 0.119853 788 37 0.099031 1276 44 0.125224 1883 46 0.071582 1106 44 0.076949 931 41 0.1201103 1032 44 0.065872 1321 38 0.075210 1311 38 0.124341 1470 37 0.051276 952 38 0.0990422 720 37 0.107681 788 24 0.0397892 727 44 0.051398 716 37 0.0319079 1048 38 0.094130 1951 45 0.0746653 1675 45 0.025731 1302 37 0.051307 1521 44 0.060899 1466 37 0.055757 0.0257470 0.063963 0.040505 0.0357310 0.045504 0.0514883 0.045934 0.0420962 0.0602022 0.087011 0.0510431 0.0301856 0.0723919 0.0430899 0.0583612 0.0353926 0.037146 0.031149 0.060456 0.0718144 0.016108 0.054063 0.0383724 0.0492248 0.0354687 0.0493115 0.029611 0.039477 0.0284860 0.0348608 0.0830308 0.0084880 0.0053219 0.0383748 0.00090054 0.027129 0.0033665 0.033082 0.0230752 0.020197 0.0153415 0.038592 35 0.0577031 0.058982 4.0996e-03 45 0.1396222 0.126686 0.01293578 0.4723660 0.84506416 insignificant 1 1.000000 insignificant 0.26682 9.7260e-01 insignificant 1 1.000000 insignificant 0.00801496 0.51389990 insignificant 1.00000 insignificant 0.0577152 0.029287 0.04225677 41 0.154660 0.100193 0.0544664 2.6926e-16 1.0000e+00 weaklyHypermeth 1.6829e-14 1.0000e+00 weaklyHypermeth 4.9412e-14 1.0000e+00 weaklyHypermeth 4.9412e-11 1.00000000 weaklyHypermeth 0.0380975 0.03438092 weaklyHypermeth 0.694137 insignificant 0.0562101 0.0411928 0.0165551 45 0.097726 0.077650 0.02007588 8.0245e-05 1.7457e-01 weaklyHypermeth 5.7318e-03 1.000000 weaklyHypermeth 0.00194971 1.4044e-01 weaklyHypermeth 0.162476 1.000000 insignificant 0.0402667 0.01963925 weaklyHypermeth 0.72738 insignificant 0.0589219 0.029299 0.0390931 41 0.122996 0.101983 0.0210137 2.0860e-11 1.0000e+00 weaklyHypermeth 1.0979e-09 1.0000000 weaklyHypermeth 4.9499e-09 1.0000e+00 weaklyHypermeth 2.4749e-06 1.000000 weaklyHypermeth 0.0300825 0.0851925 insignificant 1.000000 insignificant 0.0579858 0.0411876 1.5429e-02 45 0.088866 0.076033 0.01283349 3.7009e-02 8.3735e-01 weaklyHypermeth 8.4110e-01 1.000000 insignificant 2.6569e-01 0.5547790 insignificant 1.000000 1 insignificant 0.0322518 0.0524196 insignificant 1.00000 insignificant 0.028003 0.0411928 -0.02565266 41 0.048563 0.077650 -0.02908742 1.0000e+00 6.2981e-14 weaklyHypometh 1.0000e+00 1.5745e-11 weaklyHypometh 1.0000e+00 4.6526e-09 weaklyHypometh 1.000000 2.3263e-06 weaklyHypometh 0.0021692 0.90310743 insignificant 1.000000 insignificant chr1 209823778 209824778 4406 SLC30A1 ENSG00000170385 0.954245 251 5 0.869451 439 6 0.8509043 182 5 0.784368 184 3 0.8718238 194 5 0.911322 560 6 0.909337 183 5 0.9345602 247 6 0.9044896 193 5 0.949095 111 5 0.910127 391 6 0.902477 118 5 0.887395 228 5 0.9511100 146 3 0.8713860 274 6 0.6507937 81 5 0.5877088 707 2 0.886644 248 3 0.9203679 544 5 0.899845 324 6 0.811255 75 5 0.917411 103 3 0.923803 152 5 0.908723 203 3 0.938847 56 3 0.921073 397 6 0.832537 343 4 0.397874 103 3 0.9027377 424 6 0.935534 412 6 0.921200 338 6 0.860244 314 6 0.895196 200 6 0.8210526 199 3 0.997468 323 5 0.6875000 13 0 0.843465 230 6 0.9467766 364 6 0.894338 235 5 0.9709078 223 4 0.916956 227 3 0.931454 192 4 0.925621 236 5 0.924460 0.8417195 0.874551 0.903676 0.8329511 0.881468 0.8761238 0.870327 0.8272046 0.8871550 0.897642 0.8472369 0.9181915 0.9313225 0.8604707 0.9353156 0.7521338 0.898065 0.882810 0.911985 0.9776640 0.950840 0.881584 0.9333607 0.9064086 0.9293717 0.8669977 0.782211 0.923403 0.9060396 0.9014243 0.8556798 0.9135409 0.8353719 0.9981577 0.93645205 0.932478 0.9332988 0.945623 0.9528252 0.940013 0.9437878 0.917864 3 0.8834969 0.896540 -1.5564e-02 6 0.8423233 0.771911 0.07041243 0.5433434 0.40988201 insignificant 1 1.000000 insignificant 0.34427 4.3415e-01 insignificant 1 1.000000 insignificant 0.01443591 0.76835627 lowCoverage 1.00000 lowCoverage 0.8837708 0.920993 -0.03745222 6 0.899377 0.909444 -0.0100672 5.6674e-01 2.1494e-03 weaklyHypometh 1.0000e+00 2.3294e-01 insignificant 5.3322e-01 2.5917e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant 0.0051294 0.91966700 lowCoverage 1.000000 lowCoverage 0.8837708 0.9424978 -0.0601825 4 0.899377 0.928568 -0.02919109 9.6939e-01 4.4340e-03 lowCoverage 1.0000e+00 0.393845 lowCoverage 0.99450230 1.4290e-03 lowCoverage 1.000000 0.238172 lowCoverage -0.0574830 0.02894788 lowCoverage 0.90462 lowCoverage 0.8974623 0.920993 -0.0226339 6 0.900563 0.909444 -0.0088817 7.2263e-01 2.9860e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant 7.7168e-01 1.1582e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0093065 0.8828864 lowCoverage 1.000000 lowCoverage 0.8974623 0.9424978 -3.9223e-02 4 0.900563 0.928568 -0.02800559 9.8535e-01 3.3762e-02 lowCoverage 1.0000e+00 1.000000 lowCoverage 9.9918e-01 0.0199586 lowCoverage 1.000000 1 lowCoverage -0.0719189 0.1351129 lowCoverage 1.00000 lowCoverage 0.920993 0.9424978 -0.01670812 4 0.909444 0.928568 -0.01912387 5.3938e-01 5.1082e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.6000e-01 3.5873e-01 lowCoverage 1.000000 1.0000e+00 lowCoverage -0.0626124 0.22492619 lowCoverage 1.000000 lowCoverage chr1 209869578 209870578 4413 SLC30A1 ENSG00000170385 0.460297 216 6 0.359044 368 9 0.4539630 336 9 0.433962 129 5 0.2074870 214 6 0.594610 191 7 0.403403 279 6 0.3189700 188 6 0.2313196 229 6 0.351464 214 5 0.363167 259 6 0.376529 163 5 0.256297 238 5 0.1973684 40 2 0.3075736 244 5 0.3103604 167 6 0.0957796 256 3 0.533634 234 6 0.0842943 292 6 0.376938 215 8 0.343376 77 6 0.428571 29 2 0.515112 187 9 0.406204 135 6 0.366667 20 2 0.484764 400 9 0.445044 122 6 0.594061 52 5 0.4018967 260 6 0.328307 386 9 0.408474 336 9 0.706533 217 8 0.479687 335 9 0.3537902 264 6 0.731648 329 7 0.5000000 19 2 0.470165 107 6 0.4236429 323 9 0.388732 197 5 0.2423554 145 6 0.174423 135 2 0.233054 425 4 0.440312 157 5 0.504852 0.4118464 0.419114 0.328138 0.3252107 0.557192 0.4683737 0.486301 0.4522246 0.4028191 0.491330 0.3533463 0.2681023 0.2986838 0.3281257 0.4542368 0.3917053 0.459099 0.153812 0.393470 0.4641500 0.495552 0.554492 0.6708428 0.6724205 0.4204438 0.6290535 0.686596 0.540175 0.3398815 0.3949817 0.7446232 0.5242151 0.4197224 0.5590900 0.46878286 0.517340 0.3522006 0.532337 0.3642105 0.274511 0.3132009 0.443128 3 0.3009839 0.420982 -9.0394e-02 6 0.4404497 0.524380 -0.08393011 0.9999629 0.00037497 weaklyHypometh 1 0.093743 weaklyHypometh 0.98781 7.4403e-04 weaklyHypometh 1 0.326768 insignificant -0.11659433 0.01187342 weaklyHypometh 1.00000 insignificant 0.3001120 0.448802 -0.11394309 6 0.394150 0.501594 -0.1074436 9.7530e-01 9.8426e-10 weaklyHypometh 1.0000e+00 2.4607e-07 weaklyHypometh 7.5281e-01 2.4640e-04 weaklyHypometh 1.0000e+00 0.04927910 weaklyHypometh -0.1573323 0.02911193 weaklyHypometh 0.646932 insignificant 0.3009839 0.4305949 0.0273780 5 0.440450 0.372466 0.06798388 2.8890e-02 9.7759e-01 weaklyHypermeth 7.4076e-01 1.000000 insignificant 0.01041223 9.9408e-01 weaklyHypermeth 0.578457 1.000000 insignificant 0.0400479 0.51550928 lowCoverage 1.00000 lowCoverage 0.4204597 0.448802 -0.0241113 6 0.471533 0.501594 -0.0300610 4.0169e-01 6.2797e-03 weaklyHypometh 1.0000e+00 0.7849687 insignificant 4.2897e-01 7.0080e-02 insignificant 1.0000e+00 1.000000 insignificant -0.0407380 0.5216642 insignificant 1.000000 insignificant 0.4209815 0.4305949 1.3917e-01 5 0.524380 0.372466 0.15191399 4.0179e-04 1.0000e+00 weaklyHypermeth 2.3635e-02 1.000000 weaklyHypermeth 7.2969e-05 0.9999952 weaklyHypermeth 0.014594 1 weaklyHypermeth 0.1566422 0.0325897 lowCoverage 1.00000 lowCoverage 0.448802 0.4295175 0.07349549 5 0.501594 0.302740 0.19885428 1.5673e-05 9.9966e-01 weaklyHypermeth 2.6122e-03 1.0000e+00 weaklyHypermeth 2.3875e-04 9.9996e-01 weaklyHypermeth 0.059687 1.0000e+00 weaklyHypermeth 0.1973802 0.02389547 lowCoverage 0.519467 lowCoverage chr1 209938278 209939278 4422 NEK2 ENSG00000117650 0.150539 276 7 0.132112 433 10 0.2455190 476 10 0.114207 189 7 0.1776923 355 12 0.275574 501 10 0.116757 580 10 0.2220915 407 10 0.1558850 525 10 0.266091 521 10 0.108437 434 10 0.090123 559 12 0.251306 419 10 0.1917926 171 6 0.1684137 481 10 0.1253612 477 9 0.0864727 449 4 0.207586 298 8 0.1825494 455 10 0.230977 314 10 0.257255 134 10 0.059524 109 4 0.161805 320 10 0.143430 186 10 0.246020 181 7 0.349987 436 10 0.214225 242 10 0.183692 140 8 0.1084576 401 10 0.257246 494 10 0.320200 410 10 0.165955 279 10 0.380375 384 10 0.2612894 365 10 0.485236 294 9 0.4047619 49 4 0.342105 232 11 0.2623682 507 10 0.259224 339 10 0.1574893 272 8 0.171445 166 7 0.113241 287 6 0.207705 201 7 0.273409 0.2617644 0.476843 0.197576 0.3688852 0.298590 0.2452032 0.372705 0.2847462 0.3324587 0.215840 0.2133668 0.5561669 0.3693843 0.3470051 0.2738136 0.1793827 0.297189 0.340568 0.250582 0.3455584 0.217868 0.297507 0.3054273 0.4330111 0.5899475 0.3351706 0.254968 0.304852 0.5251970 0.5904052 0.2607547 0.5078957 0.2464721 0.5250632 0.65272107 0.616738 0.3194783 0.387915 0.2908568 0.282982 0.2652743 0.287590 6 0.1688702 0.256395 -4.1177e-02 10 0.2041487 0.268724 -0.06457493 0.9994874 0.02495702 weaklyHypometh 1 1.000000 insignificant 0.99569 7.2474e-01 insignificant 1 1.000000 insignificant -0.03067540 0.28740391 insignificant 1.00000 insignificant 0.1689108 0.330963 -0.11858994 10 0.213870 0.264003 -0.0501329 6.4337e-01 9.8240e-17 weaklyHypometh 1.0000e+00 9.8240e-14 weaklyHypometh 9.2014e-01 2.9633e-05 weaklyHypometh 1.0000e+00 0.00987774 weaklyHypometh -0.1810483 0.00246272 weaklyHypometh 0.094720 weaklyHypometh 0.1686194 0.2830040 0.0201789 8 0.176125 0.159434 0.01669052 9.2815e-02 2.7157e-01 insignificant 1.0000e+00 1.000000 insignificant 0.05985633 9.4715e-01 insignificant 1.000000 1.000000 insignificant -0.0068465 0.81399575 insignificant 1.00000 insignificant 0.2559327 0.330967 -0.0807567 10 0.257040 0.284524 -0.0274844 9.9907e-01 3.8011e-06 weaklyHypometh 1.0000e+00 0.0019005 weaklyHypometh 9.9864e-01 1.8436e-03 weaklyHypometh 1.0000e+00 0.460909 insignificant -0.1503729 0.0058907 weaklyHypometh 0.168305 insignificant 0.2559903 0.2830040 6.9537e-02 8 0.200993 0.159434 0.04155937 1.0748e-01 9.9796e-01 insignificant 1.0000e+00 1.000000 insignificant 1.2423e-01 0.9995090 insignificant 1.000000 1 insignificant 0.0238289 0.5060248 insignificant 1.00000 insignificant 0.332598 0.2830040 0.05547386 8 0.337005 0.159434 0.17757117 1.6526e-06 9.9987e-01 weaklyHypermeth 4.1316e-04 1.0000e+00 weaklyHypermeth 1.1080e-05 9.9999e-01 weaklyHypermeth 0.011080 1.0000e+00 weaklyHypermeth 0.1742018 0.00327545 weaklyHypermeth 0.140624 insignificant chr1 210400278 210401278 4436 ENSG00000208192 0.836857 128 6 0.543038 61 6 0.4250000 33 4 0.643519 117 6 0.5000000 25 4 0.727497 136 6 0.626407 43 4 0.7022846 91 6 0.5888889 34 4 0.806548 46 6 0.614531 153 6 0.666667 9 0 0.782938 85 6 0.5037037 37 2 0.6492063 71 6 0.3750000 18 0 0.7500000 3 0 0.852805 82 6 0.8610682 121 6 0.707011 94 6 0.659772 52 6 0.873016 35 6 0.629167 46 5 0.715812 50 2 0.696429 35 4 0.602262 108 6 0.777778 42 2 0.273810 12 1 0.7989554 93 6 0.873529 92 6 0.729162 134 6 0.710606 84 6 0.768519 31 2 0.8152778 67 4 0.497222 55 7 0.7500000 8 0 0.693849 60 6 0.6064900 123 6 0.764646 47 4 0.8439571 152 6 0.792632 84 6 0.766667 89 6 0.826775 90 6 0.797566 0.7372222 0.536155 0.783642 0.7500438 0.823642 0.6051852 0.735281 0.5925130 0.8123016 0.686807 0.9777778 0.7888889 0.3888889 0.6622222 0.2444444 NA 0.838584 0.874174 0.630268 0.8724427 0.912169 0.778704 0.8092593 0.6769841 0.8161111 0.7888889 NA 0.779177 0.8589542 0.8325982 0.6078788 0.7148148 0.7577778 0.7501235 0.75394607 0.647487 0.7494658 0.736296 0.8226316 0.797447 0.8958730 0.780858 0 0.7555876 0.800766 -4.1188e-02 6 0.6639404 0.664977 -0.00103622 0.9168400 0.09966775 insignificant 1 1.000000 insignificant 0.93793 8.1760e-02 insignificant 1 1.000000 insignificant -0.03687629 0.51201922 lowCoverage 1.00000 lowCoverage 0.7557971 0.770349 -0.02121140 6 0.658346 0.521622 0.1367240 2.2442e-01 6.6960e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.8320e-01 6.6377e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0304112 0.60829222 lowCoverage 1.000000 lowCoverage 0.7627872 0.8073593 -0.0435056 6 0.758564 0.806329 -0.04776589 9.3215e-01 4.9217e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 0.97320228 4.1642e-02 weaklyHypometh 1.000000 1.000000 insignificant -0.1407870 0.00054672 lowCoverage 0.10934 lowCoverage 0.8015365 0.770349 0.0130234 6 0.683307 0.521622 0.1616849 1.1543e-01 9.1922e-01 insignificant 1.0000e+00 1.0000000 insignificant 7.5704e-02 9.1048e-01 insignificant 9.4630e-01 1.000000 insignificant 0.0064651 0.9238292 lowCoverage 1.000000 lowCoverage 0.8112713 0.8073593 4.6289e-03 6 0.806707 0.806329 0.00037769 5.7925e-01 5.7301e-01 insignificant 1.0000e+00 1.000000 insignificant 6.2999e-01 0.4220995 insignificant 1.000000 1 insignificant -0.1039107 0.0504092 lowCoverage 1.00000 lowCoverage 0.810398 0.8073593 0.00469438 6 0.782434 0.806329 -0.02389574 7.9306e-01 1.2293e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.1214e-01 1.5276e-01 insignificant 1.000000 1.0000e+00 insignificant -0.1103758 0.07201404 lowCoverage 1.000000 lowCoverage chr1 210481978 210482978 4445 ENSG00000208192 0.916301 90 3 0.731689 197 5 0.7994152 94 4 0.950980 91 4 0.9476190 77 5 0.882598 227 5 0.798656 103 5 0.7526729 150 4 0.8069079 107 4 0.915873 77 4 0.893767 144 5 0.888889 58 2 0.906145 138 3 0.8511905 25 1 0.9218254 117 4 0.9868421 39 2 0.8854167 531 4 0.919285 92 3 0.9361905 100 4 0.919485 101 4 0.768651 47 4 0.858333 36 2 0.942373 111 5 0.981481 52 4 0.986667 22 1 0.941995 170 5 0.902778 33 3 0.650547 48 3 0.9243717 112 4 0.808649 198 5 0.937394 179 5 0.762255 150 5 0.684745 175 5 0.8610401 100 5 0.657540 84 4 0.9000000 20 2 0.645034 79 5 0.7571518 186 5 0.913589 67 5 0.9001709 74 5 0.879230 67 3 0.883929 35 1 0.851579 78 3 0.896371 0.8174824 0.817459 0.953669 0.9539171 0.871368 0.6310700 0.856633 0.7950976 0.8975934 0.873841 0.9426523 0.8734000 0.8672283 0.9015105 0.9906621 0.8780932 0.879495 0.887558 0.897716 0.8775730 0.765703 0.919484 0.9775986 0.9573130 0.8909677 0.7795699 0.859083 0.860643 0.9475676 0.8918100 0.8860125 0.6873065 0.8778360 0.6468467 0.79032258 0.871310 0.5832638 0.881027 0.8307968 0.887326 0.8052995 0.792020 1 0.8956216 0.911612 -3.0825e-02 4 0.8807068 0.844047 0.03666011 0.6915707 0.02739958 lowCoverage 1 1.000000 lowCoverage 0.87657 1.5820e-02 lowCoverage 1 1.000000 lowCoverage 0.00846286 0.80494827 lowCoverage 1.00000 lowCoverage 0.8956216 0.790373 0.08860491 5 0.880707 0.667191 0.2135157 2.5155e-04 9.7169e-01 weaklyHypermeth 4.2636e-03 1.0000e+00 weaklyHypermeth 8.4057e-02 9.0771e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.1296690 0.03108612 lowCoverage 0.675785 lowCoverage 0.8967007 0.8130841 0.0566842 4 0.905717 0.873232 0.03248462 4.7810e-04 4.3881e-01 lowCoverage 2.5163e-02 1.000000 lowCoverage 0.20962299 2.3658e-01 lowCoverage 1.000000 1.000000 lowCoverage -0.0051121 0.78653430 lowCoverage 1.00000 lowCoverage 0.9116118 0.790373 0.1237202 4 0.844047 0.667191 0.1768556 1.8624e-05 9.9987e-01 lowCoverage 4.3312e-04 1.0000000 lowCoverage 9.4802e-03 9.9998e-01 lowCoverage 1.7237e-01 1.000000 lowCoverage 0.1212061 0.0474828 lowCoverage 0.828672 lowCoverage 0.9142607 0.8130841 7.5840e-02 3 0.928332 0.873232 0.05509985 1.0947e-03 9.5275e-01 lowCoverage 5.4734e-02 1.000000 lowCoverage 2.9726e-02 0.7462709 lowCoverage 1.000000 1 lowCoverage -0.0135750 0.6762136 lowCoverage 1.00000 lowCoverage 0.795276 0.8130841 -0.08202941 4 0.819782 0.873232 -0.05345037 8.2947e-01 2.0734e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.3999e-01 1.5353e-01 lowCoverage 1.000000 1.0000e+00 lowCoverage -0.1347811 0.02756250 lowCoverage 0.551250 lowCoverage chr1 210834778 210835778 4457 ATF3 ENSG00000162772 0.733164 279 7 0.739869 712 10 0.7054653 256 8 0.888475 302 9 0.7113753 154 9 0.842140 917 9 0.720417 272 9 0.8268628 356 9 0.8122628 153 6 0.748963 165 8 0.859890 581 9 0.884686 92 5 0.788250 242 8 0.8805700 118 6 0.8190567 244 9 0.8518519 104 8 0.9852941 59 4 0.802166 278 9 0.7914798 288 9 0.773731 498 9 0.808167 145 9 0.783330 113 8 0.824234 289 8 0.677423 213 9 0.941468 59 6 0.885642 641 9 0.794444 168 6 0.787653 113 8 0.7284216 289 7 0.895868 666 9 0.761178 657 9 0.722768 682 9 0.857253 346 9 0.9658120 158 9 1.000000 238 7 0.7000000 19 3 0.821064 284 9 0.9303465 619 9 0.676060 475 9 0.8387920 391 10 0.636183 190 7 0.872964 230 6 0.757227 252 9 0.771350 0.7493091 0.727092 0.893652 0.7185273 0.828379 0.7805916 0.812873 0.8042343 0.7923887 0.864341 0.8210433 0.7969193 0.8594787 0.7961585 0.8887717 0.8747760 0.810044 0.754137 0.854936 0.8160414 0.733813 0.823607 0.7943364 0.9250044 0.8782019 0.7984698 0.755130 0.670994 0.8995900 0.7565564 0.8186019 0.9355465 0.9812941 0.9958641 0.72862252 0.931121 0.9365825 0.656765 0.8290134 0.670911 0.8427989 0.734874 5 0.7965068 0.812639 -1.0921e-02 9 0.7811483 0.739084 0.04206437 0.7422464 0.34987665 insignificant 1 1.000000 insignificant 0.92791 2.9069e-01 insignificant 1 1.000000 insignificant 0.00741537 0.78956640 insignificant 1.00000 insignificant 0.7965068 0.933894 -0.12927449 9 0.781148 0.823491 -0.0423422 9.8397e-01 1.8656e-10 weaklyHypometh 1.0000e+00 9.3279e-08 weaklyHypometh 9.9990e-01 2.4594e-07 weaklyHypometh 1.0000e+00 0.00024594 weaklyHypometh -0.0707809 0.18635526 insignificant 1.000000 insignificant 0.7965068 0.6144343 0.1006285 9 0.781148 0.769304 0.01184411 3.0637e-06 6.6840e-04 weaklyHypermeth 4.3431e-04 0.133680 weaklyHypermeth 0.06320340 1.2568e-02 inconclusive 1.000000 0.872098 insignificant 0.0520533 0.32901728 insignificant 1.00000 insignificant 0.8126394 0.933894 -0.1149568 9 0.739084 0.823491 -0.0844066 9.9889e-01 5.8240e-06 weaklyHypometh 1.0000e+00 0.0019413 weaklyHypometh 9.9995e-01 8.0529e-05 weaklyHypometh 1.0000e+00 0.040264 weaklyHypometh -0.0781962 0.1600146 insignificant 1.000000 insignificant 0.8126394 0.6144343 1.1475e-01 9 0.739084 0.769304 -0.03022026 1.6420e-04 6.4756e-02 weaklyHypermeth 1.0947e-02 1.000000 weaklyHypermeth 1.8528e-01 0.0583446 insignificant 1.000000 1 insignificant 0.0446379 0.4113647 insignificant 1.00000 insignificant 0.933894 0.6144343 0.22987459 9 0.823491 0.769304 0.05418631 1.7879e-08 6.7240e-01 hypermethylated 5.9597e-06 1.0000e+00 hypermethylated 2.0031e-03 8.1145e-01 weaklyHypermeth 0.333848 1.0000e+00 insignificant 0.1228342 0.08734323 insignificant 1.000000 insignificant chr1 215512978 215513978 4510 ESRRG ENSG00000196482 0.777649 302 12 0.688422 278 12 0.7386827 121 9 0.768734 200 9 0.7397938 98 8 0.773040 340 12 0.728902 165 12 0.6922001 173 11 0.6751623 112 9 0.798942 100 8 0.677666 305 12 0.749679 84 9 0.772606 167 9 0.8653846 60 5 0.7577381 154 12 0.8069444 55 5 0.8374218 45 5 0.805323 209 9 0.7924537 211 12 0.734669 378 12 0.811839 76 6 0.820860 71 7 0.759083 179 9 0.777381 111 9 0.577062 79 9 0.705231 239 12 0.788146 144 6 0.829545 74 7 0.7755240 138 11 0.738573 262 12 0.740648 229 12 0.735701 362 12 0.617920 189 12 0.6830205 109 8 0.716510 175 12 0.7916667 52 5 0.569615 117 10 0.7407186 285 12 0.748741 256 11 0.7526844 273 9 0.796047 216 9 0.907210 233 9 0.832719 269 9 0.831100 0.7639838 0.797948 0.818829 0.7970682 0.814427 0.7546623 0.725367 0.7152096 0.8742416 0.781260 0.7885952 0.8229035 0.9116607 0.8107648 0.8501287 0.8441015 0.868141 0.846440 0.764550 0.8319084 0.843835 0.825840 0.8289514 0.7848782 0.7451223 0.8597270 0.835083 0.834359 0.8041597 0.7836856 0.7951650 0.7382737 0.6984316 0.7412643 0.79267429 0.676985 0.7889223 0.814031 0.8731150 0.840081 0.9124168 0.838276 5 0.7821198 0.783605 -4.3956e-04 12 0.7288068 0.763734 -0.03492732 0.6672182 0.74184615 insignificant 1 1.000000 insignificant 0.38350 2.3907e-01 insignificant 1 1.000000 insignificant 0.00410448 0.85826024 insignificant 1.00000 insignificant 0.7821198 0.725998 0.04967057 12 0.728807 0.647642 0.0811650 3.7094e-04 9.9945e-01 weaklyHypermeth 6.1823e-03 1.0000e+00 weaklyHypermeth 3.0257e-03 1.0000e+00 weaklyHypermeth 7.3799e-02 1.00000000 weaklyHypermeth 0.0724955 0.08359602 insignificant 1.000000 insignificant 0.7821198 0.8604651 -0.0593123 9 0.728807 0.792878 -0.06407100 3.1919e-01 9.9839e-04 weaklyHypometh 1.0000e+00 0.142628 insignificant 0.64330282 5.6293e-03 weaklyHypometh 1.000000 0.562932 insignificant -0.0484096 0.18148630 insignificant 1.00000 insignificant 0.7836049 0.725998 0.0499520 12 0.763734 0.647642 0.1160923 1.0211e-02 9.8238e-01 weaklyHypermeth 1.2925e-01 1.0000000 insignificant 1.6328e-03 9.9701e-01 weaklyHypermeth 4.4130e-02 1.000000 weaklyHypermeth 0.0683910 0.1118531 insignificant 1.000000 insignificant 0.7836049 0.8604651 -5.4124e-02 9 0.763734 0.792878 -0.02914368 9.4587e-01 7.0089e-03 weaklyHypometh 1.0000e+00 1.000000 insignificant 8.4815e-01 0.1972194 insignificant 1.000000 1 insignificant -0.0525141 0.1750468 insignificant 1.00000 insignificant 0.725998 0.8604651 -0.11455444 9 0.647642 0.792878 -0.14523602 9.9251e-01 1.8297e-04 weaklyHypometh 1.0000e+00 5.0826e-03 weaklyHypometh 9.9889e-01 5.1739e-04 weaklyHypometh 1.000000 2.7231e-02 weaklyHypometh -0.1209051 0.02339423 weaklyHypometh 0.519467 insignificant chr1 221127078 221128078 4664 DISP1 ENSG00000154309 0.808245 548 17 0.639003 412 17 0.7489133 272 16 0.803718 390 17 0.7976491 424 12 0.802449 458 17 0.713981 248 16 0.7794990 415 17 0.6858841 300 13 0.747741 352 17 0.830881 578 17 0.751937 229 11 0.790582 909 17 0.8253228 349 16 0.7617958 411 17 0.5850088 170 11 0.7303028 231 12 0.766941 546 17 0.7878213 419 16 0.790915 371 17 0.759255 135 11 0.720511 124 14 0.708576 478 16 0.832189 168 17 0.807959 196 17 0.697223 573 16 0.804006 192 11 0.691287 69 5 0.8036399 586 17 0.800247 530 17 0.734564 461 17 0.823419 553 17 0.708979 522 17 0.6301717 251 15 0.698535 281 16 0.8514069 58 6 0.648478 194 16 0.7332013 450 17 0.790230 526 17 0.8167817 511 16 0.793946 438 16 0.843388 578 17 0.778141 430 17 0.804524 0.6640421 0.744125 0.806297 0.8080792 0.789799 0.7351367 0.754347 0.7070486 0.7508788 0.831757 0.7913706 0.7748688 0.8260570 0.7605065 0.6509992 0.7497938 0.754449 0.803883 0.791556 0.7735822 0.716776 0.741418 0.8280252 0.8106655 0.7389162 0.8075477 0.768932 0.791045 0.7967406 0.7558277 0.8324625 0.7058026 0.6732207 0.6967460 0.83987790 0.721094 0.7631352 0.818640 0.8206429 0.797903 0.8322458 0.790733 10 0.7834910 0.830750 -1.6258e-02 17 0.7927919 0.797290 -0.00449818 0.9699939 0.10695561 insignificant 1 1.000000 insignificant 0.86854 3.4179e-02 weaklyHypometh 1 1.000000 insignificant -0.00781018 0.70710926 insignificant 1.00000 insignificant 0.7834910 0.748861 0.05865919 16 0.792792 0.674846 0.1179455 1.9933e-08 9.9998e-01 weaklyHypermeth 5.5369e-07 1.0000e+00 weaklyHypermeth 5.0682e-03 9.9569e-01 weaklyHypermeth 1.1519e-01 1.00000000 insignificant 0.0456340 0.23282611 insignificant 1.000000 insignificant 0.7833998 0.7676198 -0.0386959 17 0.767990 0.803679 -0.03568804 9.9983e-01 2.9701e-03 weaklyHypometh 1.0000e+00 0.297013 insignificant 0.99960827 1.3053e-03 weaklyHypometh 1.000000 0.238172 insignificant -0.0470678 0.01891608 weaklyHypometh 0.72738 insignificant 0.8307503 0.748861 0.0765726 16 0.797290 0.674846 0.1224437 1.9164e-10 9.9997e-01 weaklyHypermeth 8.7108e-09 1.0000000 weaklyHypermeth 1.1015e-03 9.9878e-01 weaklyHypermeth 3.2396e-02 1.000000 weaklyHypermeth 0.0534442 0.1734110 insignificant 1.000000 insignificant 0.8306631 0.7676198 -2.5574e-02 17 0.776224 0.803679 -0.02745489 9.8139e-01 6.7291e-02 insignificant 1.0000e+00 1.000000 insignificant 9.9293e-01 0.0677247 insignificant 1.000000 1 insignificant -0.0392576 0.0578909 insignificant 1.00000 insignificant 0.749429 0.7676198 -0.09938042 16 0.705702 0.803679 -0.09797686 1.0000e+00 2.8187e-09 weaklyHypometh 1.0000e+00 2.1682e-07 weaklyHypometh 1.0000e+00 1.9092e-05 weaklyHypometh 1.000000 2.3865e-03 weaklyHypometh -0.0927018 0.03317998 weaklyHypometh 0.626037 insignificant chr1 222050138 222051138 4699 CAPN2 ENSG00000162909 0.835556 46 5 0.869175 212 5 0.9291706 270 5 1.000000 14 0 0.9651048 246 5 0.913333 52 5 0.942186 294 5 0.9004243 179 5 0.9538879 229 5 0.956894 189 5 0.907438 173 5 0.954359 264 5 0.959978 200 5 NA 0 0 0.9708019 239 5 0.9153253 237 5 0.9652778 72 5 0.983333 46 4 0.9185405 173 5 1.000000 34 4 0.942997 56 5 1.000000 3 0 0.878045 97 5 0.955556 42 4 NA 0 0 0.986654 201 5 0.897222 45 5 0.945714 59 4 0.9551587 167 5 0.950806 165 5 0.936769 160 5 0.893723 69 5 0.943341 191 5 0.9611111 118 5 0.864762 124 5 NA 0 0 0.969534 101 5 0.9509981 170 5 0.971429 32 4 0.9714286 39 5 0.966667 15 1 0.920000 25 4 1.000000 13 0 0.850292 0.8789500 0.939092 1.000000 0.9655398 0.921053 0.9436041 0.908627 0.9529641 0.9703283 0.917124 0.9618758 0.9562455 NA 0.9722957 0.9406982 0.9684454 0.985380 0.913291 1.000000 0.9475527 NA 0.905364 0.9610136 NA 0.9874953 0.8823099 0.946115 0.960805 0.9524945 0.9275788 0.8996355 0.9495065 0.9645874 0.8220551 NA 0.963812 0.9420996 0.972431 0.9749373 0.956140 0.9578947 1.000000 0 0.9346797 0.942669 -7.0958e-03 5 0.9359105 0.942146 -0.00623507 0.5334884 0.29262207 insignificant 1 1.000000 insignificant 0.53817 7.2984e-01 insignificant 1 1.000000 insignificant -0.00125172 0.93425064 lowCoverage 1.00000 lowCoverage 0.9346797 0.936080 -0.00087836 5 0.935911 0.932518 0.0033928 9.9669e-02 7.2390e-02 insignificant 9.2287e-01 1.0000e+00 insignificant 5.5979e-01 1.4117e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0010394 0.96244244 lowCoverage 1.000000 lowCoverage 0.9346797 0.9596774 -0.0207331 3 0.935911 0.955947 -0.02003685 9.5685e-01 1.0802e-02 lowCoverage 1.0000e+00 0.720134 lowCoverage 0.99985536 1.3153e-03 lowCoverage 1.000000 0.238172 lowCoverage -0.0269160 0.13010596 lowCoverage 1.00000 lowCoverage 0.9426692 0.936080 0.0067926 5 0.942146 0.932518 0.0096279 3.8223e-01 3.1697e-01 insignificant 1.0000e+00 1.0000000 insignificant 7.9846e-01 2.8272e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0022911 0.9199324 lowCoverage 1.000000 lowCoverage 0.9426692 0.9596774 -1.7409e-02 3 0.942146 0.955947 -0.01380178 9.1952e-01 7.1237e-02 lowCoverage 1.0000e+00 1.000000 lowCoverage 9.9983e-01 0.0061583 lowCoverage 1.000000 1 lowCoverage -0.0256643 0.1660615 lowCoverage 1.00000 lowCoverage 0.936080 0.9596774 -0.03235381 3 0.932518 0.955947 -0.02342968 7.2501e-01 2.3235e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.9861e-01 1.7778e-02 lowCoverage 1.000000 4.0404e-01 lowCoverage -0.0279554 0.25987951 lowCoverage 1.000000 lowCoverage chr1 222458638 222459638 4710 DEGS1 ENSG00000143753 0.817155 359 12 0.748871 241 11 0.8189254 148 10 0.860664 273 10 0.9545529 121 10 0.844347 376 10 0.632201 172 10 0.7771991 101 7 0.7107462 140 7 0.880158 120 10 0.855978 263 12 0.874495 134 10 0.795502 152 10 0.5950776 72 4 0.8719776 191 10 0.7616454 105 10 0.8196977 1121 11 0.815015 208 10 0.9198248 175 10 0.798360 238 10 0.794383 69 7 0.869178 88 7 0.670695 146 10 0.768450 100 8 0.794208 82 7 0.783429 236 10 0.812840 66 7 0.731602 61 5 0.8682261 126 9 0.670505 254 10 0.712760 200 10 0.824016 374 10 0.760510 137 9 0.7148211 127 10 0.803574 170 10 0.7634292 117 10 0.774080 94 6 0.7057241 251 10 0.909722 349 10 0.8918505 331 10 0.793726 291 10 0.899379 317 10 0.841373 271 10 0.865558 0.7808785 0.794550 0.888281 0.9500064 0.809962 0.8775353 0.787811 0.8379002 0.9021551 0.856808 0.8917760 0.8469234 0.8849245 0.8384721 0.8310118 0.8037765 0.777520 0.918006 0.840502 0.7650746 0.866557 0.846870 0.9180163 0.7937972 0.8334893 0.7426866 0.894980 0.875739 0.8531619 0.7936638 0.7883755 0.7477362 0.7854407 0.7886020 0.72382261 0.765706 0.6957696 0.908538 0.8996629 0.859687 0.9059273 0.851822 7 0.8411890 0.814095 2.1671e-02 10 0.7891338 0.772875 0.01625862 0.0079794 0.88257488 weaklyHypermeth 1 1.000000 insignificant 0.17484 6.1426e-01 insignificant 1 1.000000 insignificant 0.03259524 0.24828284 insignificant 1.00000 insignificant 0.8413339 0.752232 0.08466437 10 0.808409 0.743107 0.0653023 2.2571e-09 9.3316e-01 weaklyHypermeth 6.8397e-08 1.0000e+00 weaklyHypermeth 9.9634e-06 8.1966e-01 weaklyHypermeth 5.5352e-04 1.00000000 weaklyHypermeth 0.0539299 0.04149374 weaklyHypermeth 0.782901 insignificant 0.8416241 0.8762027 -0.0453639 10 0.830439 0.854672 -0.02423369 9.9324e-01 4.8004e-05 weaklyHypometh 1.0000e+00 0.024002 weaklyHypometh 0.99787295 1.3081e-02 weaklyHypometh 1.000000 0.872098 insignificant -0.0595903 0.06619400 insignificant 1.00000 insignificant 0.8135782 0.752232 0.0650854 10 0.757734 0.743107 0.0146264 5.5225e-05 8.1545e-01 weaklyHypermeth 1.1750e-03 1.0000000 weaklyHypermeth 1.0082e-03 9.0542e-01 weaklyHypermeth 3.0553e-02 1.000000 weaklyHypermeth 0.0213346 0.3991513 insignificant 1.000000 insignificant 0.8141097 0.8762027 -6.4438e-02 10 0.759909 0.854672 -0.09476303 9.9999e-01 7.8275e-05 weaklyHypometh 1.0000e+00 0.078275 weaklyHypometh 9.9878e-01 0.0023874 weaklyHypometh 1.000000 1 insignificant -0.0921856 0.0096895 weaklyHypometh 0.84759 insignificant 0.754209 0.8762027 -0.12806343 10 0.767615 0.854672 -0.08705758 9.9484e-01 1.0646e-09 weaklyHypometh 1.0000e+00 1.0646e-07 weaklyHypometh 9.9271e-01 5.3446e-06 weaklyHypometh 1.000000 1.0689e-03 weaklyHypometh -0.1135202 0.00322793 weaklyHypometh 0.140624 insignificant chr1 222466938 222467938 4711 DEGS1 ENSG00000143753 0.901684 226 5 0.854501 301 7 0.7310738 149 7 0.843329 188 5 0.9536014 102 7 0.941216 546 7 0.848825 165 7 0.9218932 206 7 0.9181973 106 7 0.924784 71 7 0.754850 407 7 0.721939 49 5 0.925510 168 7 0.9025341 52 3 0.8149413 123 7 0.8250000 25 2 0.6111111 7 0 0.797126 266 4 0.9548467 403 6 0.893190 340 7 0.899372 83 5 1.000000 7 1 0.728477 166 7 0.744527 56 5 0.952661 109 2 0.912747 309 7 0.857225 117 6 0.717803 36 4 0.9044557 298 6 0.954887 339 7 0.890762 308 7 0.914610 337 7 0.805027 261 7 0.7929579 200 7 0.903872 316 7 0.9166667 18 1 0.844322 128 5 0.9506113 367 7 0.945145 282 5 0.8613628 259 5 0.911101 165 5 0.929555 153 5 0.892400 184 5 0.872686 0.8350688 0.715007 0.900259 0.9447832 0.920900 0.8851843 0.906525 0.9089918 0.8855304 0.881939 0.6896334 0.9338601 0.8473354 0.7867598 0.8401622 0.6972482 0.767016 0.944614 0.899544 0.8842864 0.927231 0.885101 0.6177566 0.9362643 0.8587492 0.8400759 0.878117 0.876058 0.9434122 0.8644482 0.9197695 0.7733325 0.8056652 0.8034902 0.90762587 0.749149 0.9373019 0.901934 0.8718700 0.848774 0.8914597 0.845905 2 0.8705128 0.885912 -1.5927e-02 7 0.7897843 0.874148 -0.08436345 0.9925570 0.15857709 insignificant 1 1.000000 insignificant 0.96692 2.1306e-01 insignificant 1 1.000000 insignificant -0.02111973 0.53945463 insignificant 1.00000 insignificant 0.8706697 0.830233 0.03512114 7 0.872580 0.846621 0.0259590 6.5247e-02 1.5300e-01 insignificant 6.3968e-01 1.0000e+00 insignificant 5.8796e-01 5.9054e-02 insignificant 1.0000e+00 1.00000000 insignificant -0.0169019 0.62098242 insignificant 1.000000 insignificant 0.8704464 0.8667306 0.0075423 5 0.763507 0.914799 -0.15129209 8.7199e-01 5.3284e-02 insignificant 1.0000e+00 1.000000 insignificant 0.66971244 1.4563e-01 insignificant 1.000000 1.000000 insignificant -0.0559052 0.03849255 weaklyHypometh 0.98699 insignificant 0.8865215 0.830233 0.0554182 7 0.895333 0.846621 0.0487120 7.3845e-02 5.6392e-01 insignificant 7.0329e-01 1.0000000 insignificant 5.2320e-01 6.4491e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0042178 0.9123620 insignificant 1.000000 insignificant 0.8858595 0.8667306 1.4774e-02 5 0.858416 0.914799 -0.05638321 7.8303e-01 4.8514e-01 insignificant 1.0000e+00 1.000000 insignificant 6.8508e-01 0.4185907 insignificant 1.000000 1 insignificant -0.0347855 0.2751261 insignificant 1.00000 insignificant 0.830233 0.8666027 -0.04470842 5 0.846621 0.902628 -0.05600713 6.0741e-01 1.2048e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.7989e-01 5.1077e-01 insignificant 1.000000 1.0000e+00 insignificant -0.0390033 0.23161764 insignificant 1.000000 insignificant chr1 224019438 224020438 4740 ENSG00000223306 0.814835 222 6 0.861905 43 4 0.7258207 72 6 0.907407 96 6 0.7650794 34 5 0.840835 177 6 0.771650 96 6 0.6271044 48 6 0.7119048 43 5 0.826389 42 6 0.802117 119 6 0.698232 67 6 0.737807 65 6 NA 0 0 0.8098291 103 6 0.7722222 62 6 0.7761905 60 4 0.887630 117 6 0.8693801 72 6 0.800828 175 6 0.808586 33 2 0.837963 48 6 0.771337 111 6 0.798611 23 2 0.958333 22 0 0.770675 84 6 0.900000 20 2 0.714286 16 2 0.7831197 42 3 0.818425 75 5 0.774403 84 6 0.809057 256 6 0.765229 90 6 0.7121093 95 6 0.720539 62 6 0.8633478 67 6 0.657738 26 2 0.6878632 101 6 0.818529 179 6 0.8766801 156 6 0.805714 98 6 0.823440 216 6 0.859414 139 6 0.828352 0.8000000 0.718288 0.886667 0.8346667 0.844412 0.8020588 0.720202 0.7145714 0.8116667 0.804744 0.7524242 0.8002424 NA 0.8281319 0.7740000 0.7754286 0.879451 0.835912 0.770841 0.7984242 0.770556 0.789055 0.7671389 0.9800000 0.8446637 0.8706762 0.766676 0.775641 0.8400816 0.8211998 0.8023546 0.7292214 0.7224334 0.7814141 0.81745455 0.655000 0.7135590 0.819321 0.9267742 0.830009 0.8365238 0.882254 2 0.8050204 0.807125 -2.6070e-03 6 0.8008931 0.801733 -0.00083974 0.5712580 0.64041141 insignificant 1 1.000000 insignificant 0.94918 3.4283e-01 insignificant 1 1.000000 insignificant -0.02221546 0.37452938 lowCoverage 1.00000 lowCoverage 0.8050204 0.739229 0.06309910 6 0.800893 0.739240 0.0616532 5.5116e-04 9.9830e-01 weaklyHypermeth 8.7485e-03 1.0000e+00 weaklyHypermeth 6.8213e-03 9.8242e-01 weaklyHypermeth 1.3921e-01 1.00000000 insignificant 0.0553798 0.13830981 insignificant 1.000000 insignificant 0.8050204 0.8324873 -0.0327723 6 0.800893 0.834966 -0.03407260 9.7203e-01 7.3262e-02 insignificant 1.0000e+00 1.000000 insignificant 0.96378198 1.1967e-01 insignificant 1.000000 1.000000 insignificant -0.0469047 0.03959549 weaklyHypometh 0.98839 insignificant 0.8071253 0.739229 0.0684667 6 0.801733 0.739240 0.0624930 7.1348e-03 9.9736e-01 weaklyHypermeth 9.5130e-02 1.0000000 weaklyHypermeth 4.6653e-03 9.9862e-01 weaklyHypermeth 9.5209e-02 1.000000 weaklyHypermeth 0.0775953 0.0532636 lowCoverage 0.902773 lowCoverage 0.8071253 0.8324873 -3.8925e-02 6 0.801733 0.834966 -0.03323285 9.5974e-01 1.3365e-01 insignificant 1.0000e+00 1.000000 insignificant 9.1882e-01 0.4008253 insignificant 1.000000 1 insignificant -0.0246892 0.2972879 lowCoverage 1.00000 lowCoverage 0.739229 0.8324873 -0.10400522 6 0.739240 0.834966 -0.09572584 9.9920e-01 1.9435e-04 weaklyHypometh 1.0000e+00 5.2527e-03 weaklyHypometh 9.9920e-01 4.3064e-04 weaklyHypometh 1.000000 2.3924e-02 weaklyHypometh -0.1022845 0.01654365 weaklyHypometh 0.468357 insignificant chr1 228424038 228425038 4852 GALNT2 ENSG00000143641 0.783048 181 5 0.818788 69 5 0.7152047 87 5 0.845157 120 5 0.7778571 42 5 0.777500 150 5 0.731069 65 5 0.8811404 63 5 0.7963287 69 5 0.827500 61 5 0.769852 129 5 0.740202 51 5 0.759286 59 5 NA 0 0 0.7105556 64 5 0.6832234 70 5 0.8779487 65 5 0.859856 106 5 0.7274837 80 5 0.763107 160 5 0.865000 41 5 0.820000 35 5 0.821527 124 5 0.900000 18 1 0.840000 42 5 0.771825 94 5 0.800000 32 3 0.825000 21 2 0.8248060 61 5 0.768078 98 5 0.769315 102 5 0.841187 228 5 0.779048 49 5 0.6287179 58 5 0.699560 87 5 0.7497436 63 5 0.661111 31 2 0.7985714 88 5 0.812066 128 5 0.8555589 160 5 0.888534 130 5 0.847019 169 5 0.825417 136 5 0.793442 0.8297946 0.728696 0.858332 0.8179530 0.794281 0.7463208 0.903582 0.8000716 0.8360459 0.777255 0.7543828 0.7783557 NA 0.7183818 0.7042948 0.8859060 0.881107 0.725601 0.791147 0.9048658 0.860403 0.864048 0.9295302 0.8838926 0.8004910 0.8165548 0.828859 0.835058 0.7774446 0.7973375 0.8489465 0.8224992 0.6514197 0.6639600 0.76525555 0.704512 0.8368289 0.825393 0.8724500 0.900267 0.8807080 0.849429 3 0.7912478 0.822545 -2.9026e-02 5 0.7830308 0.810757 -0.02772633 0.9786476 0.06459049 insignificant 1 1.000000 insignificant 0.98114 1.1036e-02 weaklyHypometh 1 1.000000 insignificant -0.03924001 0.03321894 lowCoverage 1.00000 lowCoverage 0.7912478 0.736702 0.05495646 5 0.783031 0.727214 0.0558171 1.0328e-02 9.9606e-01 weaklyHypermeth 1.3515e-01 1.0000e+00 insignificant 1.0300e-01 9.5931e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0618628 0.08015550 lowCoverage 1.000000 lowCoverage 0.7912478 0.8437068 -0.0608509 5 0.783031 0.843932 -0.06090149 9.9968e-01 2.5534e-03 weaklyHypometh 1.0000e+00 0.297013 insignificant 0.99979295 2.9093e-03 weaklyHypometh 1.000000 0.363668 insignificant -0.0643975 0.00429185 lowCoverage 0.35765 lowCoverage 0.8225446 0.736702 0.0847138 5 0.810757 0.727214 0.0835435 2.1159e-03 9.9934e-01 weaklyHypermeth 3.2059e-02 1.0000000 weaklyHypermeth 2.0974e-02 9.9865e-01 weaklyHypermeth 3.2771e-01 1.000000 insignificant 0.1011028 0.0121708 lowCoverage 0.304270 lowCoverage 0.8225446 0.8437068 -3.2530e-02 5 0.810757 0.843932 -0.03317516 9.8400e-01 7.1205e-02 insignificant 1.0000e+00 1.000000 insignificant 9.4759e-01 0.3590719 insignificant 1.000000 1 insignificant -0.0251575 0.1796536 lowCoverage 1.00000 lowCoverage 0.736702 0.8437068 -0.11737156 5 0.727214 0.843932 -0.11671863 9.9961e-01 2.9681e-03 weaklyHypometh 1.0000e+00 5.7079e-02 weaklyHypometh 9.9895e-01 1.6257e-02 weaklyHypometh 1.000000 3.7807e-01 insignificant -0.1262603 0.00426085 lowCoverage 0.163879 lowCoverage chr1 228529938 228530938 4856 ENSG00000203257 0.877976 145 5 0.501676 298 7 0.3774081 215 7 0.683884 184 5 0.4602724 169 7 0.847244 254 6 0.547217 171 5 0.6482793 251 7 0.6708406 217 7 0.680429 168 7 0.677678 318 7 0.842512 133 3 0.305225 285 7 0.9611198 61 3 0.5897930 159 7 0.3993284 124 5 0.5260660 89 3 0.783676 253 5 0.3835263 325 7 0.584164 145 6 0.814561 99 7 0.730556 88 4 0.753529 89 6 0.758333 48 5 0.698179 110 5 0.705170 353 7 0.639435 114 6 0.537363 35 2 0.6349899 267 7 0.663290 351 7 0.571695 337 7 0.767095 190 6 0.550585 216 7 0.7415669 289 7 0.392200 222 6 0.7337662 39 3 0.500892 153 7 0.6589019 373 7 0.547917 86 5 0.8537415 150 7 0.762981 112 5 0.631181 73 4 0.813984 112 5 0.813630 0.5589326 0.329194 0.702047 0.5309082 0.804698 0.5715316 0.662015 0.6129583 0.6804449 0.737209 0.7280655 0.3050741 0.9400182 0.6598673 0.4371726 0.4249375 0.731923 0.326823 0.711119 0.7522352 0.632314 0.905291 0.6109023 0.7559234 0.6252371 0.6798248 0.618282 0.701519 0.6031128 0.5049723 0.8859279 0.5007046 0.6355256 0.2817106 0.67441331 0.785473 0.6748369 0.658611 0.8211377 0.631363 0.5208626 0.747143 2 0.5998990 0.680135 -5.0584e-02 7 0.5293294 0.612392 -0.08306235 0.9958863 0.08884330 insignificant 1 1.000000 insignificant 0.99078 1.2061e-01 insignificant 1 1.000000 insignificant -0.07210051 0.14099224 insignificant 1.00000 insignificant 0.5998990 0.704193 -0.09201349 7 0.529329 0.479156 0.0501732 1.6169e-01 1.7807e-03 weaklyHypometh 1.0000e+00 2.2259e-01 insignificant 4.7125e-01 1.4139e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0210971 0.76925609 insignificant 1.000000 insignificant 0.6000505 0.7612782 -0.0821922 5 0.588144 0.714616 -0.12647239 9.9889e-01 5.6425e-04 weaklyHypometh 1.0000e+00 0.133680 insignificant 0.99353131 5.0040e-02 insignificant 1.000000 1.000000 insignificant -0.1045453 0.17449060 insignificant 1.00000 insignificant 0.6804421 0.703646 -0.0164819 7 0.647629 0.435596 0.2120323 4.7723e-02 2.2742e-02 weaklyHypometh 4.7723e-01 1.0000000 insignificant 9.2797e-02 2.5919e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0931977 0.1752803 insignificant 1.000000 insignificant 0.6803081 0.7612782 -1.4121e-02 5 0.624880 0.714616 -0.08973645 9.3916e-01 1.8712e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 8.6901e-01 0.3194812 insignificant 1.000000 1 insignificant -0.0324448 0.6227482 insignificant 1.00000 insignificant 0.704422 0.7617261 -0.09796609 5 0.529156 0.743155 -0.21399837 9.4630e-01 9.7136e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9745e-01 1.2853e-01 insignificant 1.000000 1.0000e+00 insignificant -0.1256424 0.15487016 insignificant 1.000000 insignificant chr1 231869638 231870638 4931 KCNK1 ENSG00000135750 0.748116 445 12 0.744894 174 12 0.6638408 124 12 0.764028 247 12 0.7770757 78 9 0.745188 403 12 0.781071 134 8 0.8169729 156 10 0.6041428 164 12 0.851760 130 12 0.618431 362 12 0.848060 102 12 0.821024 176 12 0.7044818 43 2 0.8351826 163 12 0.7151332 101 8 0.8360342 129 7 0.756906 271 12 0.8153988 215 12 0.770469 362 12 0.867216 46 4 0.848286 96 11 0.814926 229 12 0.858503 69 7 0.766206 117 12 0.754039 284 12 0.859699 117 11 0.843182 85 10 0.8555526 194 12 0.732950 273 12 0.761669 235 12 0.774932 494 12 0.648113 214 12 0.6447996 171 12 0.661134 203 12 0.8065281 121 7 0.690783 101 9 0.7891202 241 9 0.783263 308 12 0.7843327 416 12 0.807063 315 12 0.803825 315 12 0.857047 368 12 0.824424 0.8188569 0.691687 0.846228 0.7890471 0.792387 0.8491685 0.787997 0.6597790 0.8340636 0.802309 0.8662350 0.8237905 0.8172304 0.8179858 0.7276208 0.8249991 0.794582 0.840027 0.829218 0.8609912 0.834577 0.790462 0.8114516 0.8311503 0.8201697 0.8464901 0.871876 0.848442 0.8646966 0.8117857 0.8381422 0.7245787 0.6209407 0.7383394 0.80824391 0.731402 0.7945315 0.826603 0.8588296 0.839611 0.8260405 0.865955 4 0.8049761 0.832515 -3.1878e-02 12 0.6938857 0.777287 -0.08340081 0.9986988 0.01610962 weaklyHypometh 1 1.000000 insignificant 0.99956 1.6086e-02 weaklyHypometh 1 1.000000 insignificant -0.05051966 0.02601076 weaklyHypometh 1.00000 insignificant 0.8059551 0.721218 0.07679268 12 0.749226 0.691606 0.0576202 1.5337e-06 9.9966e-01 weaklyHypermeth 3.5668e-05 1.0000e+00 weaklyHypermeth 1.8678e-03 9.9781e-01 weaklyHypermeth 4.6694e-02 1.00000000 weaklyHypermeth 0.0541642 0.14586746 insignificant 1.000000 insignificant 0.8059551 0.8548200 -0.0389066 12 0.749226 0.791431 -0.04220436 9.9947e-01 2.3130e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 0.99692075 7.8029e-02 insignificant 1.000000 1.000000 insignificant -0.0461956 0.04151248 weaklyHypometh 0.98839 insignificant 0.8334833 0.721218 0.1065125 12 0.787781 0.691606 0.0961752 9.3238e-09 1.0000e+00 weaklyHypermeth 3.3299e-07 1.0000000 weaklyHypermeth 5.0537e-06 1.0000e+00 weaklyHypermeth 3.6098e-04 1.000000 weaklyHypermeth 0.1046838 0.0143256 weaklyHypermeth 0.341085 insignificant 0.8334833 0.8548200 -7.8220e-03 12 0.787781 0.791431 -0.00364939 7.0050e-01 3.9836e-01 insignificant 1.0000e+00 1.000000 insignificant 5.3452e-01 0.5630735 insignificant 1.000000 1 insignificant 0.0043241 0.8294312 insignificant 1.00000 insignificant 0.721218 0.8548200 -0.11744278 12 0.691606 0.791431 -0.09982459 1.0000e+00 1.3251e-06 weaklyHypometh 1.0000e+00 5.7615e-05 weaklyHypometh 9.9999e-01 6.8662e-05 weaklyHypometh 1.000000 7.0214e-03 weaklyHypometh -0.1003598 0.01802442 weaklyHypometh 0.474830 insignificant chr1 232694138 232695138 4952 TARBP1 ENSG00000059588 0.712517 182 5 0.680111 114 5 0.6434343 92 5 0.685714 101 5 0.8605839 58 5 0.783261 272 5 0.626515 73 3 0.7415164 112 5 0.7527664 85 5 0.688827 57 3 0.722703 160 5 0.650505 35 3 0.721743 94 5 0.9333333 16 3 0.6000000 68 3 0.6504762 29 3 0.8886946 40 3 0.576687 131 5 0.8166448 115 5 0.888873 205 5 0.642857 29 3 0.597835 58 5 0.892475 104 5 0.640351 51 5 0.916667 41 3 0.827430 181 5 0.708333 38 3 0.707692 46 3 0.8574286 79 5 0.742714 141 5 0.836616 159 5 0.743961 247 5 0.730635 100 5 0.7918153 83 5 0.758578 118 5 0.9346154 32 3 0.614171 73 5 0.8157457 136 5 0.816666 150 5 0.7230205 151 5 0.782570 139 5 0.827462 113 5 0.808072 105 5 0.786466 0.6619529 0.690236 0.804852 0.8485972 0.818315 0.6974819 0.749041 0.7290249 0.8211223 0.820090 0.7443936 0.7651570 0.8431756 0.7695418 0.7025457 0.8338391 0.779588 0.802793 0.821917 0.8710692 0.788755 0.855646 0.7771599 0.9088050 0.8316368 0.7182914 0.829463 0.839946 0.7810694 0.8160632 0.8274740 0.7258810 0.6966131 0.7797278 0.91388486 0.731923 0.7543960 0.802668 0.8134935 0.809544 0.8013385 0.861416 3 0.7861697 0.818569 -3.9458e-02 5 0.7158049 0.730836 -0.01503147 0.9694190 0.01199399 weaklyHypometh 1 1.000000 insignificant 0.98856 2.2448e-02 weaklyHypometh 1 1.000000 insignificant -0.02828466 0.46470373 lowCoverage 1.00000 lowCoverage 0.7861697 0.743542 0.04575865 5 0.715805 0.751510 -0.0357050 9.4273e-03 3.8057e-01 weaklyHypermeth 1.2914e-01 1.0000e+00 insignificant 2.6402e-01 2.8543e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0430147 0.40264836 lowCoverage 1.000000 lowCoverage 0.7861697 0.8252280 -0.0350938 5 0.715805 0.767500 -0.05169495 9.6729e-01 1.1360e-01 insignificant 1.0000e+00 1.000000 insignificant 0.99099018 9.6342e-02 insignificant 1.000000 1.000000 insignificant -0.0603127 0.05657387 lowCoverage 1.00000 lowCoverage 0.8185690 0.743542 0.0816894 5 0.730836 0.751510 -0.0206736 1.2641e-05 4.8169e-01 weaklyHypermeth 3.0832e-04 1.0000000 weaklyHypermeth 3.3638e-02 5.7557e-01 weaklyHypermeth 4.6719e-01 1.000000 insignificant -0.0147300 0.7854877 lowCoverage 1.000000 lowCoverage 0.8185690 0.8252280 5.8087e-03 5 0.730836 0.767500 -0.03666348 7.2313e-01 7.4394e-01 insignificant 1.0000e+00 1.000000 insignificant 6.7635e-01 0.8218694 insignificant 1.000000 1 insignificant -0.0320280 0.3839146 lowCoverage 1.00000 lowCoverage 0.743542 0.8252280 -0.08278304 5 0.751510 0.767500 -0.01598992 6.3011e-01 1.5236e-03 weaklyHypometh 1.0000e+00 3.4627e-02 weaklyHypometh 6.6229e-01 8.5957e-02 insignificant 1.000000 1.0000e+00 insignificant -0.0172980 0.72351112 lowCoverage 1.000000 lowCoverage chr1 232710938 232711938 4955 TARBP1 ENSG00000059588 0.689431 273 10 0.648169 220 10 0.5989383 143 10 0.678230 230 10 0.6995370 109 10 0.723661 304 10 0.672509 124 10 0.7395632 176 10 0.5254775 106 7 0.786533 146 10 0.616093 327 10 0.679568 75 6 0.648157 129 10 0.6750000 70 4 0.7381402 117 9 0.7178571 45 2 0.6316701 304 5 0.712400 292 10 0.5380202 153 10 0.703868 232 10 0.700820 85 5 0.726549 84 7 0.688051 179 10 0.768601 110 7 0.782308 83 9 0.675651 234 10 0.765137 125 9 0.806474 55 3 0.6250968 166 10 0.628528 260 10 0.647323 279 10 0.638456 264 10 0.635995 166 10 0.5828322 156 10 0.610735 232 10 0.7375000 50 2 0.690057 121 10 0.6065070 250 10 0.744175 226 10 0.7574578 294 10 0.696740 256 10 0.704583 209 10 0.801489 265 10 0.786100 0.6848090 0.653425 0.773498 0.7693884 0.757962 0.7458900 0.791712 0.6524692 0.7935333 0.758446 0.7527367 0.7678262 0.7533213 0.7964639 0.8034420 0.7245015 0.759506 0.728991 0.776095 0.7388454 0.758919 0.759220 0.8355323 0.8261148 0.7754953 0.7863683 0.795499 0.721298 0.7334007 0.7118211 0.7790647 0.7024993 0.6032986 0.6881872 0.78804348 0.713960 0.6922950 0.807606 0.8099521 0.754487 0.7668802 0.812559 2 0.7342481 0.743243 5.7675e-03 10 0.6675034 0.638832 0.02867152 0.2884241 0.66402037 insignificant 1 1.000000 insignificant 0.92390 1.3067e-01 insignificant 1 1.000000 insignificant -0.03327524 0.17232088 insignificant 1.00000 insignificant 0.7347741 0.673846 0.06891747 10 0.667503 0.650046 0.0174569 1.0847e-04 9.9820e-01 weaklyHypermeth 1.9371e-03 1.0000e+00 weaklyHypermeth 3.1856e-02 9.9145e-01 weaklyHypermeth 4.8266e-01 1.00000000 insignificant 0.0272034 0.35715122 insignificant 1.000000 insignificant 0.7339860 0.7872000 -0.0447901 10 0.653545 0.783108 -0.12956365 9.9998e-01 7.7489e-03 weaklyHypometh 1.0000e+00 0.553495 insignificant 0.99992790 5.2327e-02 insignificant 1.000000 1.000000 insignificant -0.0697478 0.01652999 weaklyHypometh 0.71153 insignificant 0.7442708 0.673511 0.0641854 10 0.677715 0.615051 0.0626639 4.4277e-04 9.9636e-01 weaklyHypermeth 8.3542e-03 1.0000000 weaklyHypermeth 1.9077e-02 9.9874e-01 weaklyHypermeth 3.0770e-01 1.000000 insignificant 0.0604786 0.0711993 insignificant 1.000000 insignificant 0.7432432 0.7870296 -4.9373e-02 10 0.638832 0.763391 -0.12455914 9.9979e-01 1.2534e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 9.1784e-01 0.2529833 insignificant 1.000000 1 insignificant -0.0364726 0.1961647 insignificant 1.00000 insignificant 0.673846 0.7870296 -0.11524235 10 0.650046 0.763391 -0.11334451 1.0000e+00 6.6491e-06 weaklyHypometh 1.0000e+00 2.6597e-04 weaklyHypometh 9.9999e-01 9.8776e-03 weaklyHypometh 1.000000 2.5327e-01 insignificant -0.0969512 0.01151289 weaklyHypometh 0.359778 insignificant chr1 232801638 232802638 4966 ENSG00000212144 0.034424 3195 45 0.066957 4657 42 0.0505784 1460 41 0.050109 2647 36 0.0459031 838 41 0.090614 6670 45 0.041346 1464 45 0.0786172 1987 42 0.0540965 1137 41 0.088406 1224 41 0.051658 1782 45 0.056785 1066 43 0.048043 1418 45 0.0039683 176 9 0.0363979 1481 45 0.0397295 1122 44 0.0610772 598 30 0.058054 4141 40 0.0771287 2461 45 0.120591 5445 45 0.057147 656 36 0.061258 1751 33 0.069840 1931 45 0.084242 1460 35 0.050788 1368 36 0.051702 2335 45 0.087118 4231 42 0.095603 881 32 0.0678614 2044 39 0.060926 2655 42 0.063475 2028 42 0.054171 3485 45 0.053473 8908 40 0.0309714 2114 45 0.050155 7604 41 0.0307470 694 27 0.079373 4404 35 0.0770337 2246 42 0.074708 4279 42 0.0429950 3856 42 0.049501 4610 36 0.054270 2532 42 0.058183 3807 42 0.096440 0.1168311 0.090803 0.113047 0.1117861 0.133343 0.1007390 0.130878 0.1056682 0.1202809 0.114247 0.1185596 0.1136290 NA 0.1052835 0.0517691 0.0929936 0.113733 0.130017 0.124675 0.1024634 0.095675 0.123211 0.1080307 0.0940879 0.1236800 0.0991073 0.105637 0.120789 0.1293041 0.1302262 0.1035490 0.0865145 0.0599298 0.0769136 0.06258453 0.081627 0.0995507 0.103621 0.1074353 0.095098 0.0844098 0.111322 27 0.1511175 0.156629 7.5214e-03 45 0.0565120 0.060617 -0.00410496 0.4733265 0.33966199 insignificant 1 1.000000 insignificant 0.80029 5.1164e-01 insignificant 1 1.000000 insignificant -0.00928698 0.19414832 insignificant 1.00000 insignificant 0.1511742 0.150911 0.05715738 45 0.085971 0.069051 0.0169199 3.9394e-02 6.8265e-01 weaklyHypermeth 4.3771e-01 1.0000e+00 insignificant 2.8723e-01 9.5985e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0040985 0.69968858 insignificant 1.000000 insignificant 0.1511742 0.1603942 0.0191084 42 0.085971 0.049051 0.03692023 6.2852e-03 1.0000e+00 weaklyHypermeth 1.9046e-01 1.000000 insignificant 0.22625758 9.9850e-01 insignificant 1.000000 1.000000 insignificant 0.0017927 0.81943729 insignificant 1.00000 insignificant 0.1566289 0.150845 0.0468761 45 0.060617 0.049656 0.0109607 1.4806e-01 8.1135e-01 insignificant 1.0000e+00 1.0000000 insignificant 1.2539e-01 9.8207e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0133855 0.2056920 insignificant 1.000000 insignificant 0.1566289 0.1604990 1.2927e-02 42 0.060617 0.070906 -0.01028897 5.4419e-02 9.9968e-01 insignificant 1.0000e+00 1.000000 insignificant 2.7813e-01 0.9934396 insignificant 1.000000 1 insignificant 0.0110797 0.1372287 insignificant 1.00000 insignificant 0.150911 0.1604906 -0.04883996 42 0.069051 0.069459 -0.00040788 2.8072e-01 9.7941e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.5135e-01 9.2182e-01 insignificant 1.000000 1.0000e+00 insignificant -0.0023058 0.82656749 insignificant 1.000000 insignificant chr1 232858638 232859638 4973 IRF2BP2 ENSG00000168264 0.831709 582 7 0.578738 168 7 0.8154762 34 2 0.955168 151 3 0.5108696 57 2 0.868337 641 7 0.638605 114 2 0.9000000 81 7 0.0000000 2 0 0.927206 39 2 0.771083 354 7 0.963636 24 2 0.976608 75 5 0.8500000 26 2 0.8345238 85 5 NA 0 0 1.0000000 237 2 0.585529 521 7 0.8481383 137 7 0.913385 418 7 0.616402 45 6 0.960965 74 2 0.838829 103 5 0.466667 35 4 0.813534 124 2 0.768775 183 7 0.779215 116 7 0.200000 15 2 0.7754244 193 7 0.923191 372 7 0.912280 453 7 0.771285 307 7 0.749564 215 7 0.8440476 90 7 0.500000 50 2 0.2880435 105 4 0.724297 129 7 0.0919726 527 7 0.785260 445 7 0.9302594 227 7 0.781450 446 7 NA 0 0 0.904757 366 7 0.903406 0.9392157 0.797619 0.945673 0.9130435 0.898744 0.8877551 0.872222 0.0000000 0.8180147 0.913593 0.9090909 0.9736842 0.9000000 0.9208333 NA 1.0000000 0.719542 0.896140 0.916385 1.0000000 0.863378 0.955882 0.1666667 0.8473684 0.8928571 0.8264580 0.600000 0.936184 0.9167224 0.9267265 0.8616819 0.8577381 0.9761905 1.0000000 0.57608696 1.000000 0.2225225 0.941042 0.9490622 0.956610 NA 0.929811 2 0.8582488 0.854663 -8.6645e-03 7 0.6814357 0.615660 0.06577561 0.9807873 0.42760185 insignificant 1 1.000000 insignificant 0.72990 9.4190e-01 insignificant 1 1.000000 insignificant 0.04176924 0.61784839 lowCoverage 1.00000 lowCoverage 0.8584780 0.488330 0.33432731 7 0.757151 0.457591 0.2995600 3.2457e-11 1.0000e+00 hypermethylated 1.3229e-09 1.0000e+00 hypermethylated 1.8378e-01 9.2826e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.2443290 0.10614636 lowCoverage 1.000000 lowCoverage 0.8584402 0.9292453 -0.0656641 7 0.726795 0.792286 -0.06549159 9.9993e-01 4.2348e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 0.98548426 1.6574e-01 insignificant 1.000000 1.000000 insignificant -0.0731153 0.29078460 lowCoverage 1.00000 lowCoverage 0.8547348 0.487455 0.3552617 7 0.650600 0.374393 0.2762076 1.4540e-08 1.0000e+00 hypermethylated 4.8465e-07 1.0000000 hypermethylated 2.9581e-01 9.5930e-01 insignificant 1.0000e+00 1.000000 insignificant 0.2025598 0.1749233 insignificant 1.000000 insignificant 0.8563618 0.9292453 -5.6589e-02 7 0.769575 0.792286 -0.02271109 9.4911e-01 8.8119e-02 insignificant 1.0000e+00 1.000000 insignificant 9.3802e-01 0.0828713 insignificant 1.000000 1 insignificant -0.1148845 0.1413969 insignificant 1.00000 insignificant 0.487871 0.9292453 -0.41363052 7 0.389790 0.792286 -0.40249654 1.0000e+00 5.6459e-05 hypomethylated 1.0000e+00 1.8213e-03 hypomethylated 9.7563e-01 3.5788e-01 insignificant 1.000000 1.0000e+00 insignificant -0.3174443 0.04622253 weaklyHypometh 0.770376 insignificant chr1 232858738 232859738 4974 IRF2BP2 ENSG00000168264 0.831709 582 7 0.578738 168 7 0.8154762 34 2 0.955168 151 3 0.5108696 57 2 0.868337 641 7 0.638605 114 2 0.9000000 81 7 0.0000000 2 0 0.927206 39 2 0.771083 354 7 0.963636 24 2 0.976608 75 5 0.8500000 26 2 0.8345238 85 5 NA 0 0 1.0000000 237 2 0.585529 521 7 0.8481383 137 7 0.913385 418 7 0.616402 45 6 0.960965 74 2 0.838829 103 5 0.466667 35 4 0.813534 124 2 0.768775 183 7 0.779215 116 7 0.200000 15 2 0.7754244 193 7 0.923191 372 7 0.912280 453 7 0.771285 307 7 0.749564 215 7 0.8440476 90 7 0.500000 50 2 0.2880435 105 4 0.724297 129 7 0.0919726 527 7 0.785260 445 7 0.9302594 227 7 0.781450 446 7 NA 0 0 0.904757 366 7 0.903406 0.9392157 0.797619 0.945673 0.9130435 0.898744 0.8877551 0.872222 0.0000000 0.8180147 0.913593 0.9090909 0.9736842 0.9000000 0.9208333 NA 1.0000000 0.719542 0.896140 0.916385 1.0000000 0.863378 0.955882 0.1666667 0.8473684 0.8928571 0.8264580 0.600000 0.936184 0.9167224 0.9267265 0.8616819 0.8577381 0.9761905 1.0000000 0.57608696 1.000000 0.2225225 0.941042 0.9490622 0.956610 NA 0.929811 2 0.8582488 0.854663 -8.6645e-03 7 0.6814357 0.615660 0.06577561 0.9807873 0.42760185 insignificant 1 1.000000 insignificant 0.72990 9.4190e-01 insignificant 1 1.000000 insignificant 0.04176924 0.61784839 lowCoverage 1.00000 lowCoverage 0.8584780 0.488330 0.33432731 7 0.757151 0.457591 0.2995600 3.2457e-11 1.0000e+00 hypermethylated 1.3229e-09 1.0000e+00 hypermethylated 1.8378e-01 9.2826e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.2443290 0.10614636 lowCoverage 1.000000 lowCoverage 0.8584402 0.9292453 -0.0656641 7 0.726795 0.792286 -0.06549159 9.9993e-01 4.2348e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 0.98548426 1.6574e-01 insignificant 1.000000 1.000000 insignificant -0.0731153 0.29078460 lowCoverage 1.00000 lowCoverage 0.8547348 0.487455 0.3552617 7 0.650600 0.374393 0.2762076 1.4540e-08 1.0000e+00 hypermethylated 4.8465e-07 1.0000000 hypermethylated 2.9581e-01 9.5930e-01 insignificant 1.0000e+00 1.000000 insignificant 0.2025598 0.1749233 insignificant 1.000000 insignificant 0.8563618 0.9292453 -5.6589e-02 7 0.769575 0.792286 -0.02271109 9.4911e-01 8.8119e-02 insignificant 1.0000e+00 1.000000 insignificant 9.3802e-01 0.0828713 insignificant 1.000000 1 insignificant -0.1148845 0.1413969 insignificant 1.00000 insignificant 0.487871 0.9292453 -0.41363052 7 0.389790 0.792286 -0.40249654 1.0000e+00 5.6459e-05 hypomethylated 1.0000e+00 1.8213e-03 hypomethylated 9.7563e-01 3.5788e-01 insignificant 1.000000 1.0000e+00 insignificant -0.3174443 0.04622253 weaklyHypometh 0.770376 insignificant chr1 233080138 233081138 5003 ENSG00000201638 0.904635 408 6 0.702778 204 6 0.898413 80 4 0.811865 328 6 0.711420 71 3 0.818972 695 6 0.7852096 93 5 0.645963 87 4 0.8183798 71 4 0.846930 61 3 0.912814 191 6 0.800000 19 2 0.9700000 58 3 0.841071 63 3 0.651515 62 2 0.6250000 26 3 1.000000 113 1 0.827897 608 5 0.9732489 245 5 0.822652 310 6 0.859375 35 3 1.000000 30 2 0.531137 142 5 0.62500 33 2 0.688195 73 5 0.966836 191 6 0.938209 143 5 0.7889194 62 4 0.954386 250 6 0.973116 175 4 0.922264 202 6 0.782760 273 6 0.9490529 128 5 0.8209879 205 5 0.694444 34 4 0.6666667 28 2 0.6334397 75 4 0.9760892 298 6 0.811339 303 6 0.859584 317 5 0.804748 390 5 0.958072 559 5 0.945719 300 6 0.906708 0.8594398 0.882571 0.9182345 0.899444 0.934349 0.8176170 0.801739 0.8872866 0.9059582 0.894263 0.918000 0.9494951 0.953250 0.802727 0.7707359 NA 0.9521721 0.956596 0.885711 0.998750 0.9981807 0.844425 0.990000 0.834229 0.9645971 0.9013208 0.870769 0.905384 0.9383591 0.9315063 0.926800 0.95856720 0.9492340 0.9354232 0.9782211 0.961675 0.9609468 0.9272768 0.9177227 0.895546 0.9097913 0.943012 2 0.9187335 0.915625 -0.00071859 5 0.688048 0.788865 -0.1008169 0.83247702 6.6152e-01 insignificant 1.00000 1.00000000 insignificant 0.966371 0.1148669 insignificant 1 1.00000 insignificant -0.01741171 0.7348050 lowCoverage 1 lowCoverage 0.9189546 0.9477124 -0.03396730 6 0.735061 0.7119136 0.02314704 8.2966e-01 7.7725e-02 insignificant 1.0000e+00 1.0000000 insignificant 9.6837e-01 1.3733e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 0.0283246 6.7762e-01 lowCoverage 1.0000e+00 lowCoverage 0.918955 0.9213483 -4.7675e-04 6 0.735061 0.696841 0.03821918 6.6728e-01 7.5733e-01 insignificant 1.0000e+00 1.0000000 insignificant 7.0344e-01 0.70558606 insignificant 1.00000000 1.00000 insignificant -0.0574541 1.9029e-01 lowCoverage 1.000000 lowCoverage 0.914589 0.9453125 -0.0320565 5 0.770181 0.6086644 0.161516 9.0281e-01 0.1975724 insignificant 1.0000e+00 1.00000 insignificant 8.6863e-01 0.5157492 insignificant 1.0000e+00 1.00000 insignificant 0.0457364 5.5501e-01 lowCoverage 1.0000e+00 lowCoverage 0.916040 0.9213483 0.0027640 5 0.777748 0.696841 0.0809070 5.4516e-01 4.6150e-01 insignificant 1.0000e+00 1.00000000 insignificant 3.5117e-01 9.0760e-01 insignificant 1.00000000 1.000000 insignificant -0.0400424 0.4780451 lowCoverage 1.00000 lowCoverage 0.9477124 0.9213483 0.03577250 6 0.7119136 0.696841 0.01507214 1.9506e-02 9.9658e-01 weaklyHypermeth 1.000000 1.0000e+00 insignificant 0.04531317 9.9988e-01 weaklyHypermeth 1.00000 1.0000e+00 insignificant -0.08577879 2.4903e-01 lowCoverage 1.000000 lowCoverage chr1 233120538 233121538 5008 ENSG00000208115 0.945430 193 5 0.884077 254 5 0.968440 248 5 0.980000 50 5 0.936797 104 5 0.962734 226 5 0.9288158 236 5 0.967365 185 5 0.9035790 235 5 0.926711 148 5 0.902174 229 5 0.890159 150 5 0.9536805 264 5 NA 0 0 0.927298 198 5 0.8259398 86 5 0.876455 69 5 0.977778 76 5 0.9396481 212 5 0.929603 198 5 0.938945 79 5 0.820000 25 2 0.942277 243 5 0.70128 48 5 1.000000 6 0 0.963525 258 5 0.852957 123 5 0.9301515 72 5 0.935468 204 5 0.957591 271 5 0.934122 224 5 0.909741 254 5 0.8164606 201 5 0.8190736 118 5 0.641780 591 5 0.7323810 45 5 0.8198993 88 5 0.3760997 323 5 0.936908 143 5 0.831276 161 5 0.925641 86 5 0.904344 199 5 0.906092 50 5 0.939310 0.8840890 0.965380 0.9813333 0.934742 0.962658 0.9334248 0.969946 0.9070261 0.9333882 0.897081 0.892692 0.9541114 NA 0.924202 0.8404795 0.8854552 0.9841975 0.939466 0.934353 0.939313 0.8175556 0.944359 0.746268 1.000000 0.9637536 0.8543195 0.928593 0.936163 0.9606614 0.9377633 0.920290 0.83178326 0.8162264 0.7179631 0.7338201 0.823693 0.4025826 0.9402570 0.8507742 0.925801 0.9086317 0.908282 5 0.9294853 0.930825 -0.00169182 5 0.929327 0.924519 0.0048083 0.44027058 4.0085e-01 insignificant 1.00000 1.00000000 insignificant 0.811021 0.5911011 insignificant 1 1.00000 insignificant 0.02054845 0.4246212 lowCoverage 1 lowCoverage 0.9294853 0.6910688 0.22815530 5 0.929327 0.6681688 0.26115855 9.6976e-19 1.0000e+00 hypermethylated 3.2325e-17 1.0000000 hypermethylated 5.0105e-08 9.9444e-01 hypermethylated 2.3152e-06 1.000000 hypermethylated 0.2267712 2.3842e-02 lowCoverage 3.6680e-01 lowCoverage 0.929485 0.9045383 2.5171e-02 5 0.929327 0.895128 0.03419967 5.5910e-05 3.5724e-01 weaklyHypermeth 4.3008e-03 1.0000000 weaklyHypermeth 8.7287e-03 0.12660258 weaklyHypermeth 0.37951032 1.00000 insignificant 0.0268677 2.3837e-01 lowCoverage 1.000000 lowCoverage 0.930825 0.6910688 0.2271401 5 0.924519 0.6681688 0.256350 5.9237e-11 1.0000000 hypermethylated 1.4809e-09 1.00000 hypermethylated 1.2457e-05 0.9994799 hypermethylated 3.7748e-04 1.00000 hypermethylated 0.2062228 3.2386e-02 lowCoverage 4.6936e-01 lowCoverage 0.930825 0.9045383 0.0223206 5 0.924519 0.895128 0.0293913 4.1089e-02 8.6693e-01 weaklyHypermeth 7.6925e-01 1.00000000 insignificant 6.4511e-02 3.3330e-01 insignificant 1.00000000 1.000000 insignificant 0.0063192 0.8345605 lowCoverage 1.00000 lowCoverage 0.6910688 0.9045383 -0.20659231 5 0.6681688 0.895128 -0.22695888 9.9997e-01 7.0111e-05 hypomethylated 1.000000 1.3483e-03 hypomethylated 0.99995019 1.3478e-04 hypomethylated 1.00000 5.3488e-03 hypomethylated -0.19990356 3.6574e-02 weaklyHypometh 0.475912 insignificant chr1 233128738 233129738 5009 ENSG00000208115 0.941497 109 7 0.697429 204 7 0.689394 35 3 0.916583 60 3 0.948413 49 4 0.881373 355 7 0.7710768 94 7 0.922698 193 7 0.9203297 63 6 0.951058 91 7 0.855346 81 7 0.952381 42 4 0.6250000 7 0 0.964502 54 4 0.833333 6 0 0.9610390 73 4 NA 0 0 0.789881 71 6 0.8615308 135 7 0.782563 187 7 0.775000 31 4 0.866667 54 4 0.928571 63 7 0.66667 8 0 0.942063 83 7 0.888386 160 7 0.817460 66 7 0.8290598 54 3 0.762074 96 4 0.815283 158 7 0.941919 36 3 0.714286 22 3 0.7340829 114 7 0.7680556 47 3 1.000000 46 3 0.6909341 85 3 0.6526961 118 7 0.9174603 61 3 0.955921 78 7 0.845238 60 7 0.937500 26 3 0.814286 33 4 0.918074 75 7 1.000000 0.7397602 0.689394 0.9165831 0.916667 0.871100 0.8863636 0.916667 1.0000000 1.0000000 0.928571 1.000000 0.8333333 1.000000 1.000000 1.0000000 NA 0.7500000 0.879630 1.000000 0.866667 1.0000000 0.944444 0.666667 0.948148 0.8461538 0.8296296 1.000000 1.000000 0.8813131 0.9419192 0.952381 0.81818182 0.7680556 1.0000000 0.7152015 0.738235 0.9174603 0.9363636 0.8333333 0.916667 1.0000000 0.958333 0 0.8679245 0.862816 0.00320499 7 0.712067 0.723624 -0.0115573 0.58628347 4.5859e-01 insignificant 1.00000 1.00000000 insignificant 0.736681 0.6047288 insignificant 1 1.00000 insignificant 0.02712208 0.4462718 lowCoverage 1 lowCoverage 0.8687664 0.7643312 0.14195356 6 0.874382 0.7179174 0.15646415 5.6064e-07 9.9766e-01 weaklyHypermeth 9.0425e-06 1.0000000 weaklyHypermeth 2.8090e-03 9.9353e-01 weaklyHypermeth 5.0160e-02 1.000000 weaklyHypermeth 0.0622036 3.3778e-01 lowCoverage 1.0000e+00 lowCoverage 0.868311 0.9007353 -2.8659e-02 7 0.765084 0.857723 -0.09263917 9.7425e-01 6.9165e-02 insignificant 1.0000e+00 1.0000000 insignificant 9.1616e-01 0.12453542 insignificant 1.00000000 1.00000 insignificant -0.0381285 3.1633e-01 lowCoverage 1.000000 lowCoverage 0.867718 0.7643312 0.1390347 6 0.862320 0.7179174 0.144403 3.6178e-05 0.9998442 weaklyHypermeth 5.3203e-04 1.00000 weaklyHypermeth 3.8522e-03 0.9998259 weaklyHypermeth 5.8367e-02 1.00000 weaklyHypermeth 0.0350815 5.8400e-01 lowCoverage 1.0000e+00 lowCoverage 0.866667 0.9007353 -0.0450915 7 0.754530 0.857723 -0.1031926 9.8937e-01 8.6458e-02 insignificant 1.0000e+00 1.00000000 insignificant 9.8783e-01 3.0852e-01 insignificant 1.00000000 1.000000 insignificant -0.0652506 0.1106564 lowCoverage 1.00000 lowCoverage 0.7643312 0.9037037 -0.18270146 6 0.7179174 0.908826 -0.19090892 9.9986e-01 9.9334e-05 weaklyHypometh 1.000000 1.8061e-03 weaklyHypometh 0.99999179 3.6466e-03 weaklyHypometh 1.00000 7.0127e-02 weaklyHypometh -0.10033210 1.4810e-01 lowCoverage 1.000000 lowCoverage chr1 233172038 233173038 5017 ENSG00000208115 0.058475 720 23 0.081144 593 22 0.042433 586 23 0.022018 777 23 0.060844 250 23 0.049984 1727 23 0.0359572 598 23 0.037935 387 23 0.0427358 456 23 0.036039 419 23 0.053021 662 23 0.095163 517 20 0.0211655 467 20 0.017857 40 4 0.039609 552 23 0.0255286 488 20 0.015632 251 17 0.071045 683 20 0.0886888 276 22 0.031165 947 23 0.095311 280 18 0.010357 314 17 0.047761 705 23 0.05712 288 19 0.053022 560 21 0.023518 831 23 0.018196 369 19 0.0089078 168 15 0.059830 342 22 0.032368 895 23 0.057493 860 23 0.118467 1135 23 0.0353932 500 20 0.0012788 379 23 0.000000 256 13 0.0010101 338 21 0.0492409 386 18 0.0069209 822 23 0.057663 1021 23 0.026395 1104 23 0.022889 916 23 0.023735 754 23 0.030287 1104 23 0.047996 0.0304047 0.033926 0.0137640 0.035284 0.038274 0.0266159 0.024670 0.0243369 0.0224283 0.039624 0.080059 0.0196491 0.021549 0.030806 0.0258244 0.0294273 0.0193724 0.063556 0.022946 0.068619 0.0079236 0.038472 0.045930 0.041919 0.0112211 0.0150057 0.022196 0.031825 0.0272370 0.0316990 0.073636 0.02464354 0.0044846 0.0061724 0.0033884 0.037572 0.0061070 0.0377918 0.0210122 0.015929 0.0128381 0.021402 14 0.0429173 0.052530 -0.00440167 23 0.056476 0.047578 0.0088977 0.51234750 2.6377e-01 insignificant 1.00000 1.00000000 insignificant 0.292539 0.9664470 insignificant 1 1.00000 insignificant -0.00220716 0.8426028 insignificant 1 insignificant 0.0428408 0.0100709 0.03856731 22 0.044438 0.0115298 0.03290867 3.3212e-11 1.0000e+00 weaklyHypermeth 7.7237e-10 1.0000000 weaklyHypermeth 5.0934e-08 1.0000e+00 weaklyHypermeth 2.3152e-06 1.000000 weaklyHypermeth 0.0306814 1.4343e-02 weaklyHypermeth 2.4729e-01 insignificant 0.042841 0.0332721 1.2122e-02 23 0.044438 0.033407 0.01103169 8.9532e-03 7.4662e-01 weaklyHypermeth 2.6333e-01 1.0000000 insignificant 9.5939e-02 0.84484831 insignificant 1.00000000 1.00000 insignificant 0.0141282 1.2127e-01 insignificant 1.000000 insignificant 0.052546 0.0100709 0.0494361 22 0.049647 0.0115298 0.038117 8.6596e-09 1.0000000 weaklyHypermeth 2.0618e-07 1.00000 weaklyHypermeth 1.1907e-04 1.0000000 weaklyHypermeth 2.9041e-03 1.00000 weaklyHypermeth 0.0328885 2.2959e-02 weaklyHypermeth 3.6311e-01 insignificant 0.052546 0.0332721 0.0202605 23 0.049647 0.033407 0.0162399 1.5349e-02 3.1541e-01 weaklyHypermeth 3.6544e-01 1.00000000 insignificant 4.6249e-01 2.8857e-01 insignificant 1.00000000 1.000000 insignificant 0.0163354 0.1799659 insignificant 1.00000 insignificant 0.0100709 0.0332721 -0.02738367 22 0.0115298 0.033407 -0.02187697 1.0000e+00 6.2705e-05 weaklyHypometh 1.000000 1.2295e-03 weaklyHypometh 0.99999940 1.4442e-04 weaklyHypometh 1.00000 5.3488e-03 weaklyHypometh -0.01655319 1.6214e-01 insignificant 1.000000 insignificant chr1 233188038 233189038 5026 ENSG00000208115 0.878450 321 11 0.777083 133 11 0.731496 165 11 0.849156 179 11 0.715801 99 9 0.836219 321 11 0.7434584 131 11 0.770110 166 11 0.7120409 106 9 0.819697 111 9 0.775354 373 11 0.626840 73 7 0.7602322 171 10 0.820000 40 5 0.843579 141 11 0.5175000 63 7 0.637390 67 7 0.910749 140 8 0.7080661 177 8 0.835307 279 11 0.731990 60 5 0.904545 79 6 0.849939 213 11 0.86048 43 3 0.794444 39 2 0.794111 214 11 0.838419 84 8 0.7095238 49 5 0.705326 126 5 0.867090 177 11 0.756520 207 10 0.877694 366 11 0.8278237 126 11 0.8030359 140 8 0.802118 118 6 0.6714286 39 5 0.8038341 101 8 0.6957750 195 11 0.863205 271 11 0.894175 290 8 0.792134 249 8 0.849373 271 8 0.721828 301 10 0.848084 0.7878075 0.680489 0.8090825 0.822361 0.786596 0.8226518 0.779447 0.6686758 0.8360983 0.839099 0.776415 0.7750254 0.760074 0.789240 0.7428165 0.7956475 0.8538552 0.818718 0.805878 0.795041 0.8619560 0.857280 0.793185 0.876852 0.8098535 0.8424070 0.719113 0.727020 0.8341143 0.7277973 0.819964 0.77373970 0.7815352 0.8261872 0.7546092 0.722163 0.7360467 0.8341229 0.8844029 0.832579 0.8288129 0.811930 4 0.8083538 0.807367 -0.00503123 11 0.827059 0.838268 -0.0112086 0.97064664 7.4077e-01 insignificant 1.00000 1.00000000 insignificant 0.996327 0.3456840 insignificant 1 1.00000 insignificant -0.04408049 0.1399670 insignificant 1 insignificant 0.8082949 0.7830320 0.02174208 10 0.813756 0.7885904 0.02516541 1.3395e-01 7.6047e-01 insignificant 8.9298e-01 1.0000000 insignificant 3.1774e-01 3.9420e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0039095 9.1109e-01 insignificant 1.0000e+00 insignificant 0.808295 0.8376812 -4.0477e-02 8 0.813756 0.834377 -0.02062106 9.8674e-01 6.5366e-02 insignificant 1.0000e+00 1.0000000 insignificant 9.8969e-01 0.01696385 weaklyHypometh 1.00000000 0.80780 insignificant -0.0607168 1.3860e-01 insignificant 1.000000 insignificant 0.807251 0.7830320 0.0255902 10 0.825827 0.7885904 0.037236 1.1454e-01 0.7952842 insignificant 7.4864e-01 1.00000 insignificant 2.9516e-01 0.8137981 insignificant 1.0000e+00 1.00000 insignificant 0.0401710 2.5669e-01 insignificant 1.0000e+00 insignificant 0.807367 0.8371925 -0.0393527 8 0.838268 0.810493 0.0277748 9.5747e-01 5.8977e-02 insignificant 1.0000e+00 1.00000000 insignificant 9.5251e-01 1.1335e-01 insignificant 1.00000000 1.000000 insignificant -0.0166363 0.6601492 insignificant 1.00000 insignificant 0.7830320 0.8376812 -0.07063673 7 0.7885904 0.834377 -0.04578647 9.8998e-01 3.8513e-03 weaklyHypometh 1.000000 5.0017e-02 weaklyHypometh 0.99006382 8.1600e-03 weaklyHypometh 1.00000 1.2883e-01 insignificant -0.05680728 1.9780e-01 insignificant 1.000000 insignificant chr1 233189638 233190638 5027 ENSG00000208115 0.507172 219 6 0.412132 280 6 0.398290 60 6 0.519903 212 5 0.408844 42 6 0.452885 401 6 0.4065488 150 6 0.382008 86 6 0.3421123 57 6 0.398148 33 4 0.516856 252 6 0.286111 25 2 0.5000000 42 5 0.491667 26 2 0.390278 37 5 0.5750000 20 2 0.535461 282 1 0.403776 179 6 0.2666034 106 6 0.340911 205 6 0.459977 58 6 0.375000 12 0 0.450056 101 6 0.54003 41 3 0.300129 206 5 0.377700 251 6 0.587500 40 5 0.4142857 31 3 0.321208 115 6 0.438766 167 6 0.539905 257 6 0.562802 178 6 0.2355921 185 5 0.2142857 68 5 0.333333 163 2 0.6527342 80 3 0.2368591 169 6 0.4557416 283 6 0.372691 319 6 0.228327 265 6 0.201388 357 5 0.303698 90 6 0.243439 267 6 0.460190 0.3472040 0.375803 0.4890378 0.260881 0.420673 0.3705442 0.338316 0.3212437 0.3267622 0.519908 0.266129 0.3655914 0.456989 0.370520 0.4809338 NA 0.3279236 0.203140 0.361333 0.563321 0.3360215 0.393346 0.595593 0.314351 0.3613634 0.5311828 0.370968 0.281803 0.3908276 0.5149097 0.588254 0.15844306 0.0376344 0.1808379 0.3055628 0.055135 0.2755276 0.3084874 0.1984363 0.189251 0.2462557 0.188540 1 0.4439941 0.461486 -0.00767416 6 0.513583 0.382640 0.1309429 0.87809186 4.9276e-01 insignificant 1.00000 1.00000000 insignificant 0.967751 0.2361060 insignificant 1 1.00000 insignificant -0.02054482 0.5427910 lowCoverage 1 lowCoverage 0.4437892 0.2534319 0.22422056 6 0.444094 0.4135699 0.03052456 6.0738e-07 8.8041e-01 hypermethylated 9.6409e-06 1.0000000 hypermethylated 3.2240e-03 9.9254e-01 weaklyHypermeth 5.2292e-02 1.000000 weaklyHypermeth 0.0719776 3.6104e-01 lowCoverage 1.0000e+00 lowCoverage 0.443748 0.2164869 2.2538e-01 6 0.434777 0.271794 0.16298243 3.2869e-10 9.8267e-01 hypermethylated 1.0956e-07 1.0000000 hypermethylated 3.5356e-04 0.99239239 hypermethylated 0.04419526 1.00000 hypermethylated 0.1568266 2.9655e-03 lowCoverage 0.211821 lowCoverage 0.461486 0.2542194 0.1999915 6 0.382640 0.4868736 -0.104234 6.4294e-04 0.9681935 weaklyHypermeth 7.3901e-03 1.00000 weaklyHypermeth 4.4909e-03 0.9788705 weaklyHypermeth 6.6042e-02 1.00000 weaklyHypermeth 0.0925224 2.6095e-01 lowCoverage 1.0000e+00 lowCoverage 0.462069 0.2164869 0.2303521 6 0.454631 0.271794 0.1828363 3.0522e-07 9.9866e-01 hypermethylated 6.2364e-05 1.00000000 hypermethylated 8.4400e-05 9.9968e-01 hypermethylated 0.01406675 1.000000 hypermethylated 0.1773714 0.0013717 lowCoverage 0.27728 lowCoverage 0.2518519 0.2164869 0.01965922 6 0.3158315 0.271794 0.04403711 3.4869e-01 7.4103e-03 inconclusive 1.000000 8.4208e-02 inconclusive 0.65075168 6.7554e-02 insignificant 1.00000 7.3423e-01 insignificant 0.08484903 3.0505e-01 lowCoverage 1.000000 lowCoverage chr1 239781432 239782432 5091 KMO ENSG00000117009 0.929678 170 5 0.842769 130 5 0.854590 118 5 0.870908 114 5 0.883937 98 5 0.851275 343 5 0.9358469 131 5 0.906373 95 5 0.9480316 117 5 0.955487 91 5 0.966359 88 5 0.780556 50 5 0.9192679 128 5 NA 0 0 0.936364 106 5 0.9377778 32 5 0.960000 52 5 0.933165 113 5 0.7563889 54 5 0.873956 238 5 0.892063 34 4 0.813876 61 5 0.890619 113 5 0.81148 52 5 0.749091 53 5 0.935538 162 5 0.876104 88 5 0.9150649 46 5 0.937619 93 5 0.954947 219 5 0.930573 210 5 0.881429 279 5 0.6868056 141 5 0.6682424 64 5 0.987500 73 4 0.8777778 27 3 0.8707602 83 5 0.7674098 205 5 0.716046 227 5 0.816437 128 5 0.857904 150 5 0.869645 159 5 0.856765 191 5 0.928770 0.8413777 0.856071 0.8780325 0.885974 0.853736 0.9378261 0.908493 0.9472039 0.9576685 0.966701 0.783053 0.9237665 NA 0.941652 0.9365385 0.9629808 0.9325104 0.762440 0.879578 0.894918 0.8172387 0.889642 0.812319 0.747640 0.9368144 0.8776271 0.917801 0.937603 0.9550152 0.9321021 0.884512 0.68758347 0.6711393 0.9121635 0.8725962 0.874677 0.7767636 0.7206740 0.8201705 0.864894 0.8721414 0.859272 5 0.8919753 0.902128 -0.01006698 5 0.891673 0.901939 -0.0102669 0.84548368 3.1544e-01 insignificant 1.00000 1.00000000 insignificant 0.181247 0.8432296 insignificant 1 1.00000 insignificant 0.01461877 0.5226853 lowCoverage 1 lowCoverage 0.8919753 0.7858347 0.10333584 5 0.891673 0.7716495 0.12002306 5.0881e-06 9.6555e-01 weaklyHypermeth 7.7093e-05 1.0000000 weaklyHypermeth 2.0748e-02 9.8138e-01 weaklyHypermeth 2.3053e-01 1.000000 insignificant 0.0872364 1.4941e-01 lowCoverage 1.0000e+00 lowCoverage 0.891975 0.8175439 7.4829e-02 5 0.891673 0.816171 0.07550159 7.2001e-05 1.0000e+00 weaklyHypermeth 5.1429e-03 1.0000000 weaklyHypermeth 4.4535e-04 0.99999470 weaklyHypermeth 0.04948296 1.00000 weaklyHypermeth 0.0736263 5.7546e-02 lowCoverage 0.948309 lowCoverage 0.902128 0.7858347 0.1155730 5 0.901939 0.7716495 0.130290 3.5991e-05 0.9702144 weaklyHypermeth 5.3203e-04 1.00000 weaklyHypermeth 7.6649e-02 0.9161729 insignificant 6.7831e-01 1.00000 insignificant 0.0726176 2.2285e-01 lowCoverage 1.0000e+00 lowCoverage 0.902128 0.8175439 0.0853009 5 0.901939 0.816171 0.0857685 1.3704e-05 9.9998e-01 weaklyHypermeth 1.1420e-03 1.00000000 weaklyHypermeth 2.2190e-03 9.9869e-01 weaklyHypermeth 0.13868872 1.000000 insignificant 0.0590075 0.1189931 lowCoverage 1.00000 lowCoverage 0.7858347 0.8175439 -0.02860149 5 0.7716495 0.816171 -0.04452147 3.4911e-01 3.1712e-01 insignificant 1.000000 1.0000e+00 insignificant 0.55347451 6.4830e-01 insignificant 1.00000 1.0000e+00 insignificant -0.01361011 8.2060e-01 lowCoverage 1.000000 lowCoverage chr1 240449232 240450232 5110 ENSG00000222120 0.929474 61 5 0.727477 77 5 0.450000 60 5 1.000000 18 1 NA 0 0 0.852026 68 5 1.0000000 9 0 1.000000 29 4 0.8777778 30 4 0.966667 26 3 0.856410 141 5 0.000000 4 0 0.9308995 84 5 NA 0 0 0.933333 16 1 NA 0 0 0.000000 2 0 1.000000 33 4 0.8729902 93 5 0.863077 76 5 0.873504 51 5 1.000000 12 0 0.971429 30 3 0.90000 36 4 1.000000 2 0 0.957778 49 5 0.819048 33 5 0.9166667 9 0 0.912088 44 5 0.935833 80 5 0.924346 56 5 0.946066 118 5 0.9252747 68 5 0.9300699 68 5 1.000000 60 4 0.5000000 4 0 1.0000000 29 2 0.7092424 77 5 0.866667 25 4 0.915253 88 5 0.931429 18 2 0.893333 32 5 0.666667 12 0 0.942105 0.7770414 0.368750 1.0000000 NA 0.833905 1.0000000 1.000000 0.9097222 1.0000000 0.862637 0.000000 0.9447751 NA 0.958333 NA NA 1.0000000 0.879410 0.875733 0.951923 1.0000000 1.000000 1.000000 0.985522 0.9861111 0.9583333 0.958333 0.903846 0.9833333 0.9337214 0.984149 0.88186813 0.8750000 1.0000000 0.2500000 1.000000 0.8239583 0.8958333 0.9294047 0.910714 0.9750000 0.666667 0 0.8440145 0.932692 -0.09451673 5 0.840631 0.925574 -0.0849432 0.99696045 1.0879e-03 weaklyHypometh 1.00000 0.27197215 insignificant 0.983106 0.0113350 weaklyHypometh 1 1.00000 insignificant -0.14972218 0.0769876 lowCoverage 1 lowCoverage 0.8440145 0.8921569 -0.04895084 5 0.840631 0.8888893 -0.04825879 9.2083e-01 1.2750e-01 insignificant 1.0000e+00 1.0000000 insignificant 7.7991e-01 2.5645e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0640901 5.7893e-01 lowCoverage 1.0000e+00 lowCoverage 0.844015 0.8971429 -5.4108e-02 5 0.840631 0.889761 -0.04913033 9.5129e-01 1.8490e-01 insignificant 1.0000e+00 1.0000000 insignificant 4.2741e-01 0.72589802 insignificant 1.00000000 1.00000 insignificant -0.0746619 4.2620e-01 lowCoverage 1.000000 lowCoverage 0.932692 0.8921569 0.0421860 5 0.925574 0.8888893 0.036684 5.3648e-02 0.7792187 insignificant 3.7780e-01 1.00000 insignificant 1.0429e-01 0.5553749 insignificant 8.4106e-01 1.00000 insignificant 0.0856321 3.4582e-01 lowCoverage 1.0000e+00 lowCoverage 0.932692 0.8971429 0.0404777 5 0.925574 0.889761 0.0358129 4.9525e-02 9.8085e-01 weaklyHypermeth 8.8438e-01 1.00000000 insignificant 2.8094e-02 9.9644e-01 weaklyHypermeth 0.80699651 1.000000 insignificant 0.0750603 0.1998817 lowCoverage 1.00000 lowCoverage 0.8921569 0.8971429 -0.00650944 5 0.8888893 0.889761 -0.00087154 3.9703e-01 6.5448e-01 insignificant 1.000000 1.0000e+00 insignificant 0.30969776 8.3090e-01 insignificant 1.00000 1.0000e+00 insignificant -0.01057173 9.1389e-01 lowCoverage 1.000000 lowCoverage chr1 244185032 244186032 5169 SMYD3 ENSG00000185420 0.875129 211 5 0.616387 83 5 0.674042 71 5 0.823962 187 5 0.508333 64 5 0.916667 79 5 0.6045322 79 4 0.840784 66 5 0.7260379 51 5 0.814286 33 3 0.678645 121 5 0.662857 25 4 0.9349206 42 3 0.983333 36 3 0.714141 46 3 1.0000000 16 2 NA 0 0 0.686495 183 7 0.9833333 43 1 0.886673 64 5 0.591667 21 3 1.000000 3 0 0.793440 114 5 0.79286 28 3 0.843137 35 2 0.691667 68 5 0.724359 51 3 0.5937500 17 1 0.929563 76 5 0.836111 45 5 0.646713 46 5 0.752381 80 3 0.6777856 104 5 0.8892857 48 4 0.799451 57 3 0.9166667 10 0 0.8865942 89 5 0.6070887 77 5 0.801319 267 6 0.778282 236 5 0.729381 193 5 0.582767 124 3 0.656323 217 5 0.784933 0.7100075 0.711790 0.8353416 0.736752 0.794872 0.7479382 0.741780 0.7841332 0.7289377 0.833391 0.723810 0.8949939 0.958974 0.753225 0.9652790 NA 0.8275216 0.984615 0.802239 0.875237 0.9957495 0.885951 0.853846 0.778399 0.8512821 0.8356345 0.583333 0.863248 0.9008547 0.7790127 0.955018 0.71935497 0.8241758 0.7076641 0.8964316 0.738907 0.7546523 0.8395924 0.8265073 0.834276 0.8355153 0.882358 0 0.8280000 0.854202 -0.02364695 5 0.621492 0.646399 -0.0249063 0.65650738 7.8000e-02 insignificant 1.00000 1.00000000 insignificant 0.917821 0.1772248 insignificant 1 1.00000 insignificant 0.01951522 0.6965868 lowCoverage 1 lowCoverage 0.8288591 0.7844156 0.05104188 5 0.658291 0.7035966 -0.04530590 7.1450e-02 5.7752e-01 insignificant 4.9276e-01 1.0000000 insignificant 4.5935e-01 8.3527e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0103263 8.7087e-01 lowCoverage 1.0000e+00 lowCoverage 0.827748 0.8727097 -3.3768e-02 5 0.598446 0.620378 -0.02193230 8.9512e-01 1.8818e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.4982e-01 0.74065990 insignificant 1.00000000 1.00000 insignificant 0.0762045 1.7529e-01 lowCoverage 1.000000 lowCoverage 0.854922 0.7844156 0.0747041 5 0.625678 0.7035966 -0.077918 7.3230e-03 0.9508708 weaklyHypermeth 6.3129e-02 1.00000 weaklyHypermeth 1.1063e-01 0.7809118 insignificant 8.6429e-01 1.00000 insignificant -0.0298415 6.4856e-01 lowCoverage 1.0000e+00 lowCoverage 0.853701 0.8727097 -0.0097103 5 0.614253 0.620378 -0.0061254 9.7262e-01 7.4752e-01 insignificant 1.0000e+00 1.00000000 insignificant 3.8728e-01 8.3525e-01 insignificant 1.00000000 1.000000 insignificant 0.0566893 0.3199235 lowCoverage 1.00000 lowCoverage 0.7844156 0.8734300 -0.08485392 5 0.7035966 0.632416 0.07118038 9.9982e-01 1.9905e-03 weaklyHypometh 1.000000 2.7268e-02 weaklyHypometh 0.99330510 1.9927e-01 insignificant 1.00000 1.0000e+00 insignificant 0.08653079 2.2150e-01 lowCoverage 1.000000 lowCoverage chr1 245577432 245578432 5198 ZNF496 ENSG00000162714 0.674808 480 15 0.752099 326 16 0.466152 411 16 0.561264 465 15 0.833227 157 10 0.528238 432 15 0.3508958 318 16 0.821236 324 16 0.8040598 259 16 0.474717 584 16 0.452252 407 16 0.187152 617 16 0.8755769 394 16 0.582041 215 15 0.686997 436 16 0.1574747 621 16 0.411765 30 1 0.430183 485 15 0.8512058 259 15 0.730467 308 15 0.307052 192 12 0.391666 452 15 0.322053 437 15 0.24729 258 15 0.918025 209 15 0.887578 357 16 0.325472 302 15 0.5542623 165 15 0.467712 365 15 0.952822 406 15 0.902773 313 15 0.080057 684 15 0.0894308 491 16 0.0365957 375 16 0.101350 562 13 0.0812987 162 11 0.0611934 330 15 0.0727205 358 15 0.774469 416 15 0.583095 525 15 0.902500 468 15 0.893120 365 15 0.577260 562 15 0.667313 0.7645554 0.496133 0.6373276 0.806345 0.539187 0.3861316 0.874470 0.8000791 0.4894489 0.451930 0.167037 0.9323850 0.600050 0.684420 0.1630144 0.4333333 0.4885385 0.896776 0.761787 0.291909 0.3243006 0.340471 0.214089 0.887556 0.8666512 0.3844114 0.521955 0.495176 0.9480112 0.9038900 0.060980 0.08190930 0.0333907 0.0766326 0.0500385 0.063590 0.0584715 0.7377691 0.5391832 0.881708 0.8753159 0.593355 15 0.5600585 0.486108 0.08155000 15 0.533659 0.495316 0.0383434 0.02343425 9.0695e-01 weaklyHypermeth 1.00000 1.00000000 insignificant 0.070564 0.9757278 insignificant 1 1.00000 insignificant 0.05186055 0.6137484 insignificant 1 insignificant 0.5600585 0.0992098 0.48331108 16 0.533659 0.0796445 0.45401453 8.4304e-43 1.0000e+00 hypermethylated 1.2043e-40 1.0000000 hypermethylated 1.1609e-32 1.0000e+00 hypermethylated 1.1609e-29 1.000000 hypermethylated 0.5078257 1.5392e-09 hypermethylated 1.0994e-07 hypermethylated 0.561060 0.7046233 -1.4369e-01 15 0.564950 0.718721 -0.15377110 1.0000e+00 1.7033e-05 weaklyHypometh 1.0000e+00 0.0085167 weaklyHypometh 9.9998e-01 0.00177983 weaklyHypometh 1.00000000 0.25426 insignificant -0.1644981 9.2123e-02 insignificant 1.000000 insignificant 0.486108 0.0992098 0.3988965 15 0.495316 0.0796445 0.415671 5.9276e-19 1.0000000 hypermethylated 2.9638e-17 1.00000 hypermethylated 1.4395e-22 1.0000000 hypermethylated 7.1975e-20 1.00000 hypermethylated 0.4559651 3.1315e-04 hypermethylated 1.3048e-02 hypermethylated 0.486081 0.7046233 -0.2290835 15 0.498897 0.718721 -0.2198240 1.0000e+00 8.1199e-06 hypomethylated 1.0000e+00 0.00405994 hypomethylated 1.0000e+00 1.0669e-04 hypomethylated 1.00000000 0.053346 hypomethylated -0.2163586 0.0783011 insignificant 1.00000 insignificant 0.0994281 0.7046233 -0.62475590 15 0.0896001 0.718721 -0.62912078 1.0000e+00 2.6375e-56 hypomethylated 1.000000 2.6375e-53 hypomethylated 1.00000000 1.6466e-21 hypomethylated 1.00000 1.6466e-18 hypomethylated -0.67232377 6.2349e-04 hypomethylated 0.047961 hypomethylated chr2 1703660 1704660 5227 TPO ENSG00000115705 0.870668 373 9 0.807229 294 9 0.833496 244 9 0.819936 290 9 0.824974 119 9 0.844926 383 9 0.7840479 262 6 0.856705 236 9 0.8665191 236 9 0.778504 168 9 0.836626 284 9 0.809907 174 6 0.9004407 200 9 0.728889 33 5 0.873382 261 9 0.8469500 93 4 0.925579 358 4 0.755310 318 9 0.8964856 217 9 0.869718 295 9 0.922399 81 4 0.801316 143 9 0.877407 237 9 0.78553 81 4 0.875587 113 9 0.870260 379 9 0.840732 144 9 0.6944737 78 6 0.755888 221 8 0.864430 318 9 0.796423 319 9 0.868499 470 9 0.5444444 226 9 0.5795550 195 9 0.630444 169 9 0.6324969 84 4 0.6756410 117 8 0.4257050 331 9 0.779574 365 9 0.835705 382 9 0.861578 299 9 0.789108 319 9 0.764877 400 9 0.854897 0.8129825 0.814785 0.8423958 0.778535 0.871750 0.8444219 0.877298 0.8882967 0.8295369 0.885496 0.829407 0.8402768 0.819275 0.877692 0.7775178 0.9037567 0.6794086 0.887103 0.885646 0.892108 0.7178504 0.894294 0.865336 0.891033 0.8588354 0.8935321 0.827532 0.805799 0.8545902 0.8540964 0.903092 0.53358056 0.4349027 0.5960023 0.5707049 0.757794 0.2170683 0.7866469 0.8090800 0.846998 0.8281825 0.729880 4 0.8511782 0.858359 -0.01000542 9 0.888778 0.810997 0.0777811 0.97207994 8.1126e-01 insignificant 1.00000 1.00000000 insignificant 0.951158 0.6438786 insignificant 1 1.00000 insignificant 0.00710236 0.7454872 insignificant 1 insignificant 0.8509625 0.4643494 0.38457363 9 0.839347 0.5457834 0.29356318 4.1640e-24 1.0000e+00 hypermethylated 2.0820e-22 1.0000000 hypermethylated 1.0904e-08 1.0000e+00 hypermethylated 6.0579e-07 1.000000 hypermethylated 0.2551336 5.3852e-04 hypermethylated 1.7951e-02 hypermethylated 0.850963 0.8045326 4.9264e-02 9 0.839347 0.809860 0.02948657 1.5660e-02 9.1780e-01 weaklyHypermeth 4.2324e-01 1.0000000 insignificant 2.6829e-02 0.94389445 weaklyHypermeth 0.92514038 1.00000 insignificant 0.0303463 1.9647e-01 insignificant 1.000000 insignificant 0.858417 0.4643494 0.3955611 9 0.838107 0.5457834 0.292324 1.2966e-17 1.0000000 hypermethylated 5.8938e-16 1.00000 hypermethylated 8.0600e-08 1.0000000 hypermethylated 5.3733e-06 1.00000 hypermethylated 0.2480312 3.4191e-04 hypermethylated 1.3150e-02 hypermethylated 0.858417 0.8045326 0.0598836 9 0.838107 0.809860 0.0282472 1.3932e-03 7.2605e-01 weaklyHypermeth 5.3586e-02 1.00000000 weaklyHypermeth 4.7836e-02 7.0959e-01 weaklyHypermeth 1.00000000 1.000000 insignificant 0.0232439 0.3882543 insignificant 1.00000 insignificant 0.4643494 0.8045326 -0.33197401 9 0.5457834 0.809860 -0.26407661 1.0000e+00 2.7435e-07 hypomethylated 1.000000 8.8500e-06 hypomethylated 0.99999999 9.0909e-05 hypomethylated 1.00000 4.1322e-03 hypomethylated -0.22478729 7.6952e-04 hypomethylated 0.054966 hypomethylated chr2 1733260 1734260 5229 PXDN ENSG00000130508 0.539525 299 6 0.495703 367 6 0.439973 197 6 0.448905 278 6 0.462349 127 6 0.587436 303 6 0.4669888 323 6 0.513158 184 6 0.4259009 215 6 0.370899 82 5 0.543827 279 6 0.640212 96 6 0.4604575 186 6 0.841751 21 2 0.408275 153 6 0.2587535 88 5 0.193888 78 4 0.410725 252 5 0.6088162 225 6 0.650359 298 6 0.474830 90 6 0.277778 30 5 0.414778 217 6 0.55137 105 6 0.484848 45 1 0.420738 297 6 0.400362 93 6 0.4517705 67 7 0.525165 273 6 0.393947 365 6 0.629103 348 6 0.630190 363 6 0.2010727 285 6 0.2346257 172 6 0.538095 112 3 0.0875000 74 4 0.2131519 205 7 0.2542329 383 6 0.368862 398 6 0.394054 287 6 0.320140 251 6 0.371228 445 6 0.366083 271 6 0.464678 0.4204321 0.414932 0.4372795 0.522459 0.498113 0.4392532 0.512060 0.4014280 0.3304348 0.549254 0.577410 0.3425942 0.615636 0.373879 0.2503552 0.3750193 0.4401098 0.613343 0.440532 0.382126 0.3140097 0.411377 0.549824 0.370056 0.4164588 0.4322085 0.447258 0.446491 0.4478004 0.4789600 0.639161 0.13977104 0.1840864 0.2365495 0.1491436 0.191550 0.1843699 0.3217544 0.3666045 0.298408 0.3189961 0.342046 4 0.5729450 0.595726 -0.02195696 6 0.631811 0.502739 0.1290723 0.95882985 5.9613e-01 insignificant 1.00000 1.00000000 insignificant 0.636791 0.9725175 insignificant 1 1.00000 insignificant 0.01715534 0.6942085 insignificant 1 insignificant 0.5725229 0.3558083 0.24510156 6 0.526614 0.2253998 0.30121439 3.9491e-19 1.0000e+00 hypermethylated 1.4626e-17 1.0000000 hypermethylated 2.7666e-10 1.0000e+00 hypermethylated 2.3055e-08 1.000000 hypermethylated 0.2336153 9.8990e-03 weaklyHypermeth 1.7998e-01 insignificant 0.571924 0.7076271 6.1829e-02 6 0.468550 0.369140 0.09940946 3.2001e-05 9.2731e-01 weaklyHypermeth 3.2001e-03 1.0000000 weaklyHypermeth 7.9228e-05 0.93609453 weaklyHypermeth 0.01320468 1.00000 weaklyHypermeth 0.1243215 1.2885e-03 weaklyHypermeth 0.149539 insignificant 0.596137 0.3558083 0.2715608 6 0.503521 0.2253998 0.278121 3.3452e-16 0.9999999 hypermethylated 1.2866e-14 1.00000 hypermethylated 7.1880e-08 0.9999876 hypermethylated 5.1343e-06 1.00000 hypermethylated 0.2164600 1.4502e-02 weaklyHypermeth 2.6367e-01 insignificant 0.596213 0.7076271 0.0872953 6 0.492203 0.369140 0.1230629 1.0162e-05 9.6126e-01 weaklyHypermeth 9.2383e-04 1.00000000 weaklyHypermeth 7.7593e-04 9.7273e-01 weaklyHypermeth 0.05968712 1.000000 weaklyHypermeth 0.1071662 0.0046039 weaklyHypermeth 0.38366 insignificant 0.3570261 0.7076271 -0.20796415 6 0.2391570 0.369140 -0.12998352 1.0000e+00 1.4004e-08 hypomethylated 1.000000 5.6018e-07 hypomethylated 0.99999995 1.7156e-05 hypomethylated 1.00000 1.0723e-03 hypomethylated -0.10929379 1.3719e-01 insignificant 1.000000 insignificant chr2 1777960 1778960 5233 PXDN ENSG00000130508 0.878307 32 4 0.546825 59 4 0.829167 33 5 0.777778 16 0 0.600000 7 0 0.768855 105 5 0.6428571 14 0 0.873810 49 6 0.5166667 20 1 0.687500 13 0 0.900544 229 7 0.400000 6 0 0.8731406 86 5 0.964286 21 1 0.570833 26 4 NA 0 0 NA 0 0 0.558503 95 4 0.8915187 274 5 0.609559 77 4 0.916190 41 5 0.833333 7 0 0.916667 19 1 0.50000 6 0 0.833333 6 0 0.853594 185 6 0.809184 97 5 0.6250000 8 0 0.910502 190 5 0.876371 223 6 0.927706 270 6 0.900000 54 5 0.5337600 139 6 0.8277663 252 6 0.000000 7 1 1.0000000 1 0 0.6463848 56 5 0.6554060 265 6 0.714286 30 4 0.739194 62 5 0.819728 31 4 0.615385 52 4 0.622564 56 4 0.555556 0.0666667 0.333333 0.5000000 1.000000 0.642857 0.0000000 0.800000 0.3333333 0.5000000 0.866667 0.000000 0.9565217 1.000000 0.625000 NA NA 0.3500000 0.920000 0.700000 0.866667 0.0000000 0.833333 1.000000 0.666667 0.8775510 0.6000000 NA 0.836364 0.8360656 0.8783784 0.800000 0.05405405 0.7285714 NA NA 0.529412 0.8985507 0.5714286 0.2666667 0.166667 0.1538462 0.266667 0 0.7863910 0.876130 -0.08881143 4 0.771073 0.871348 -0.1002750 0.99277549 5.7932e-02 lowCoverage 1.00000 1.00000000 lowCoverage 0.997924 0.0462899 lowCoverage 1 1.00000 lowCoverage -0.10903725 0.0552715 lowCoverage 1 lowCoverage 0.7867012 0.7055556 0.07729742 4 0.776341 0.5980312 0.17830980 8.8342e-03 9.1877e-01 lowCoverage 7.6819e-02 1.0000000 lowCoverage 2.6735e-01 9.6095e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 0.1055666 4.9351e-01 lowCoverage 1.0000e+00 lowCoverage 0.786885 0.6450216 1.3995e-01 4 0.801192 0.703184 0.09800821 5.8495e-02 9.1018e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 8.0715e-01 0.69508945 lowCoverage 1.00000000 1.00000 lowCoverage 0.0138881 8.0327e-01 lowCoverage 1.000000 lowCoverage 0.876588 0.7055556 0.1714956 6 0.880851 0.5980312 0.282820 2.8416e-05 0.9997141 weaklyHypermeth 4.3054e-04 1.00000 weaklyHypermeth 7.8584e-04 0.9996166 weaklyHypermeth 1.7084e-02 1.00000 weaklyHypermeth 0.2146038 1.8935e-01 lowCoverage 1.0000e+00 lowCoverage 0.876700 0.6450216 0.2366231 4 0.894090 0.703184 0.1909063 1.3408e-06 9.9359e-01 lowCoverage 1.6759e-04 1.00000000 lowCoverage 2.9828e-02 9.7450e-01 lowCoverage 0.82854281 1.000000 lowCoverage 0.1229254 0.0420161 lowCoverage 1.00000 lowCoverage 0.7055556 0.6419214 0.06279621 4 0.5980312 0.666082 -0.06805057 4.9693e-01 4.4867e-01 lowCoverage 1.000000 1.0000e+00 lowCoverage 0.83742349 3.7228e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage -0.09167845 5.4966e-01 lowCoverage 1.000000 lowCoverage chr2 1799760 1800760 5234 PXDN ENSG00000130508 0.540378 426 18 0.279635 747 18 0.432485 492 17 0.525641 440 14 0.438822 401 18 0.521776 693 20 0.4298347 649 21 0.398454 646 17 0.3709508 558 15 0.491553 414 14 0.423602 779 18 0.301286 361 15 0.3547858 569 16 0.405799 267 8 0.369457 642 14 0.1787366 331 12 0.216723 246 8 0.361265 357 15 0.3161644 463 16 0.437901 477 16 0.410750 224 17 0.211558 223 12 0.388275 426 15 0.38416 243 16 0.515815 138 11 0.392807 695 16 0.430487 311 15 0.3335158 200 11 0.436238 363 13 0.385578 763 18 0.398127 694 18 0.591706 593 18 0.0777543 656 18 0.1136495 315 17 0.098422 407 13 0.0000000 122 11 0.0588912 562 19 0.0845029 675 18 0.330617 589 19 0.402745 542 19 0.364503 530 15 0.243913 529 13 0.342308 365 18 0.321082 0.1967275 0.277402 0.3324014 0.299128 0.383702 0.2877937 0.253172 0.2363140 0.2766329 0.306207 0.204750 0.1822256 0.268795 0.234290 0.1632056 0.1408619 0.2515721 0.212861 0.267647 0.288054 0.1574713 0.297040 0.226075 0.303230 0.2358874 0.2617451 0.270902 0.280745 0.2504381 0.2269998 0.390069 0.04718087 0.0666520 0.0620342 0.0450616 0.045782 0.0311232 0.2292566 0.2251411 0.174944 0.1662091 0.257133 10 0.3208476 0.334292 -0.01055468 16 0.369003 0.372289 -0.0032858 0.80101934 3.7641e-01 insignificant 1.00000 1.00000000 insignificant 0.942713 0.6549198 insignificant 1 1.00000 insignificant -0.01682239 0.6284429 insignificant 1 insignificant 0.3210696 0.0982828 0.26922023 16 0.380212 0.0782180 0.30199390 1.6865e-60 1.0000e+00 hypermethylated 8.4323e-58 1.0000000 hypermethylated 3.0865e-28 1.0000e+00 hypermethylated 1.5433e-25 1.000000 hypermethylated 0.3175591 1.1587e-10 hypermethylated 8.9133e-09 hypermethylated 0.320912 0.2992558 5.6570e-02 16 0.384379 0.350001 0.03437772 5.1005e-05 9.6479e-01 weaklyHypermeth 4.3008e-03 1.0000000 weaklyHypermeth 1.1413e-03 0.95130412 weaklyHypermeth 0.08426948 1.00000 weaklyHypermeth 0.0529453 1.5117e-01 insignificant 1.000000 insignificant 0.334842 0.0982828 0.2739562 16 0.387801 0.0782180 0.309583 2.9500e-56 1.0000000 hypermethylated 1.4750e-53 1.00000 hypermethylated 2.5032e-23 1.0000000 hypermethylated 2.5032e-20 1.00000 hypermethylated 0.3343815 1.0626e-08 hypermethylated 1.3282e-06 hypermethylated 0.334498 0.2990215 0.0695392 16 0.372289 0.336001 0.0362884 1.8117e-05 9.6547e-01 weaklyHypermeth 1.3936e-03 1.00000000 weaklyHypermeth 6.0171e-03 9.9196e-01 weaklyHypermeth 0.28045566 1.000000 insignificant 0.0697677 0.0864566 insignificant 1.00000 insignificant 0.0981326 0.2992157 -0.21688678 16 0.0743724 0.350726 -0.27635312 1.0000e+00 1.4565e-36 hypomethylated 1.000000 4.8549e-34 hypomethylated 1.00000000 1.6750e-14 hypomethylated 1.00000 5.5834e-12 hypomethylated -0.26461380 6.6513e-05 hypomethylated 0.010395 hypomethylated chr2 3561556 3562556 5239 ADI1 ENSG00000182551 0.769524 129 5 0.334979 164 5 0.623529 58 5 0.874700 142 5 0.360638 79 5 0.802516 164 5 0.6196652 222 5 0.616667 124 5 0.6744898 80 5 0.887778 74 5 0.788030 168 5 0.641905 41 5 0.3152381 64 5 0.675294 74 5 0.436190 88 5 0.5366667 84 5 NA 0 0 0.388064 218 5 0.4458896 148 5 0.853398 119 2 0.724444 40 5 0.623077 60 1 0.671264 41 1 0.18444 42 4 0.499146 369 5 0.511421 215 5 0.298251 85 5 0.2191230 70 5 0.667451 128 5 0.436395 340 5 0.338256 266 5 0.894949 102 5 0.1522811 86 5 0.0016260 171 5 0.000000 63 5 0.0000000 114 5 0.0034843 184 5 0.0000000 168 5 0.935206 113 5 0.668750 96 5 0.647884 134 5 0.878667 167 2 0.646957 108 5 0.860110 0.3578608 0.618460 0.8595072 0.434789 0.760359 0.6692157 0.668355 0.5702165 0.8031614 0.778041 0.698816 0.3148382 0.676308 0.448145 0.4579190 NA 0.4195552 0.372372 0.822266 0.659669 0.6172971 0.678478 0.308103 0.531693 0.4836494 0.3573841 0.273826 0.589124 0.3922788 0.3446421 0.818517 0.15018959 0.0041773 0.0000000 0.0000000 0.012532 0.0000000 0.8961554 0.6407113 0.696286 0.7634254 0.695588 1 0.5989281 0.473265 0.13017711 5 0.530029 0.401434 0.1285949 0.00013676 1.0000e+00 weaklyHypermeth 0.13676 1.00000000 insignificant 0.021258 0.9998882 weaklyHypermeth 1 1.00000 insignificant 0.10721802 0.1770329 lowCoverage 1 lowCoverage 0.5989281 0.0191083 0.58115121 5 0.530029 0.0159803 0.51404889 2.3186e-25 1.0000e+00 hypermethylated 1.2881e-23 1.0000000 hypermethylated 1.6122e-13 1.0000e+00 hypermethylated 1.7913e-11 1.000000 hypermethylated 0.5866714 4.1968e-11 lowCoverage 3.8153e-09 lowCoverage 0.599464 0.7135922 -1.2758e-01 5 0.636035 0.726877 -0.09084177 9.8841e-01 7.3549e-02 insignificant 1.0000e+00 1.0000000 insignificant 9.9865e-01 0.03208330 weaklyHypometh 1.00000000 1.00000 insignificant -0.1425893 9.6679e-02 lowCoverage 1.000000 lowCoverage 0.473265 0.0191083 0.4532931 5 0.401434 0.0159803 0.385454 1.9760e-19 1.0000000 hypermethylated 1.0400e-17 1.00000 hypermethylated 3.6915e-11 1.0000000 hypermethylated 4.6143e-09 1.00000 hypermethylated 0.4794533 5.8559e-06 lowCoverage 4.1828e-04 lowCoverage 0.473534 0.7135922 -0.2504201 5 0.481721 0.726877 -0.2451557 1.0000e+00 6.9131e-07 hypomethylated 1.0000e+00 0.00069131 hypomethylated 1.0000e+00 7.4764e-05 hypomethylated 1.00000000 0.053346 hypomethylated -0.2498073 0.0159964 lowCoverage 0.69610 lowCoverage 0.0191327 0.7135922 -0.69650320 5 0.0191763 0.726877 -0.70770044 1.0000e+00 1.8932e-22 hypomethylated 1.000000 2.7046e-20 hypomethylated 1.00000000 7.0617e-09 hypomethylated 1.00000 8.8271e-07 hypomethylated -0.72926066 8.3161e-05 lowCoverage 0.010395 lowCoverage chr2 3588856 3589856 5240 RNASEH1 ENSG00000171865 0.599028 109 5 0.635805 210 5 0.466425 63 5 0.666827 122 5 0.645915 52 4 0.708945 1234 5 0.4831169 41 5 0.766671 116 5 0.6876471 64 5 0.731429 38 4 0.729418 387 5 0.600000 14 2 0.7023408 85 5 0.700000 33 5 0.705065 51 3 0.7500000 17 1 0.500000 4 0 0.627221 133 5 0.6577778 86 5 0.728758 593 5 0.721979 108 5 0.690719 85 5 0.562857 95 5 0.66508 312 3 0.675513 56 5 0.755265 220 5 0.682243 129 5 0.6354167 32 2 0.714040 77 3 0.751815 408 5 0.712230 288 5 0.718761 942 5 0.6399471 92 5 0.7090909 74 5 0.575166 103 4 0.6666667 13 0 0.7051680 105 4 0.7545268 248 5 0.685333 87 5 0.639418 89 5 0.687435 105 5 0.673333 45 5 0.724911 115 5 0.641866 0.7080720 0.517047 0.6788927 0.659011 0.802889 0.6681097 0.831875 0.7550654 0.7624339 0.792617 0.805556 0.7331306 0.695988 0.736497 0.8412563 0.7482521 0.6656270 0.660288 0.788724 0.805987 0.7577899 0.653968 0.755144 0.719023 0.8096485 0.7681570 0.697160 0.729490 0.8046090 0.7830173 0.806841 0.61706349 0.7058923 0.6652335 0.6851852 0.700502 0.7951129 0.7700926 0.6304380 0.750679 0.7419753 0.795873 2 0.8432338 0.881541 -0.01510398 5 0.699479 0.722317 -0.0228380 0.93379301 6.5798e-02 insignificant 1.00000 1.00000000 insignificant 0.808196 0.3372550 insignificant 1 1.00000 insignificant -0.03587366 0.1595676 lowCoverage 1 lowCoverage 0.8429896 0.7732283 0.05689834 5 0.582899 0.7512988 -0.16839953 9.4713e-02 4.9548e-03 inconclusive 6.4872e-01 0.5262210 insignificant 5.9034e-01 1.3638e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0204748 5.3768e-01 lowCoverage 1.0000e+00 lowCoverage 0.843234 0.7301587 3.1352e-02 5 0.699479 0.685608 0.01387131 1.5025e-01 6.1155e-02 insignificant 1.0000e+00 1.0000000 insignificant 6.3327e-01 0.12993609 insignificant 1.00000000 1.00000 insignificant -0.0274667 2.6455e-01 lowCoverage 1.000000 lowCoverage 0.881541 0.7728707 0.0736972 5 0.722317 0.7015586 0.020759 2.7478e-03 0.0376743 weaklyHypermeth 2.6939e-02 1.00000 weaklyHypermeth 9.5096e-02 0.2583208 insignificant 7.7948e-01 1.00000 insignificant 0.0153988 6.1867e-01 lowCoverage 1.0000e+00 lowCoverage 0.881541 0.7301587 0.0527784 5 0.722317 0.685608 0.0367094 5.1797e-02 3.6508e-01 insignificant 9.0872e-01 1.00000000 insignificant 4.5499e-01 3.9959e-01 insignificant 1.00000000 1.000000 insignificant 0.0084069 0.6896405 lowCoverage 1.00000 lowCoverage 0.7728707 0.7301587 0.00080325 5 0.7015586 0.685608 0.01595074 1.2647e-01 3.9336e-01 insignificant 1.000000 1.0000e+00 insignificant 0.44558412 2.1392e-01 insignificant 1.00000 1.0000e+00 insignificant -0.00699192 8.1624e-01 lowCoverage 1.000000 lowCoverage chr2 7043203 7044203 5259 RNF144A ENSG00000151692 0.860543 323 9 0.755627 328 10 0.774549 120 8 0.747834 320 9 0.707290 106 9 0.737850 534 10 0.7610140 135 10 0.858980 233 10 0.7476660 139 7 0.861793 120 7 0.857375 414 10 0.636735 48 5 0.7743562 155 7 0.828425 103 7 0.797381 166 7 0.6485261 36 4 0.708333 18 0 0.549926 254 9 0.7897705 202 9 0.825938 342 10 0.778488 87 7 0.631861 104 5 0.923087 200 10 0.73940 139 10 0.778409 54 4 0.873986 341 10 0.729659 163 10 0.9203030 73 6 0.765771 211 10 0.766488 354 8 0.852713 346 10 0.796268 403 10 0.6426284 287 10 0.7038637 128 9 0.851012 258 7 0.4422619 35 4 0.7092309 189 7 0.7124941 318 10 0.462723 415 9 0.506262 235 10 0.678180 331 9 0.647067 142 7 0.503402 275 9 0.827746 0.7810616 0.711455 0.7927307 0.733611 0.833679 0.7607060 0.882207 0.7503545 0.8649150 0.816992 0.662956 0.7564906 0.835768 0.796059 0.6093223 0.6680851 0.7014581 0.814040 0.811627 0.871191 0.5381243 0.865683 0.738792 0.924758 0.8467538 0.7669035 0.898027 0.731796 0.8882947 0.8608285 0.850280 0.59622347 0.6166703 0.8393085 0.4763526 0.786133 0.6156645 0.4329559 0.5196866 0.643458 0.5984911 0.564306 5 0.7880859 0.833535 -0.04016358 10 0.720247 0.756125 -0.0358774 0.99853272 8.7736e-02 insignificant 1.00000 1.00000000 insignificant 0.998628 0.0288713 weaklyHypometh 1 1.00000 insignificant -0.03487385 0.2646958 insignificant 1 insignificant 0.7880342 0.7116969 0.10095893 10 0.702763 0.6707513 0.03201129 9.1799e-07 4.6649e-01 weaklyHypermeth 1.4344e-05 1.0000000 weaklyHypermeth 3.0041e-01 9.3916e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0845804 1.9145e-01 insignificant 1.0000e+00 insignificant 0.788560 0.3927039 3.2238e-01 9 0.779348 0.615150 0.16419764 3.1850e-24 9.2761e-01 hypermethylated 3.1850e-21 1.0000000 hypermethylated 4.7344e-07 0.97146783 hypermethylated 0.00023672 1.00000 hypermethylated 0.2019687 5.9890e-03 weaklyHypermeth 0.300630 insignificant 0.833468 0.7116969 0.1366904 10 0.740882 0.6707513 0.070131 5.1435e-07 0.9783264 weaklyHypermeth 1.0497e-05 1.00000 weaklyHypermeth 2.1892e-02 0.9917666 weaklyHypermeth 2.3289e-01 1.00000 insignificant 0.1194542 8.5660e-02 insignificant 8.9341e-01 insignificant 0.834346 0.3927039 0.3389131 9 0.811008 0.615150 0.1958582 5.8130e-19 9.9770e-01 hypermethylated 5.8130e-16 1.00000000 hypermethylated 1.0792e-05 9.9980e-01 hypermethylated 0.00359740 1.000000 hypermethylated 0.2368426 0.0022426 weaklyHypermeth 0.28032 insignificant 0.7120462 0.3927039 0.20499113 9 0.6951444 0.615150 0.07999426 4.4763e-05 8.7750e-01 hypermethylated 0.013621 1.0000e+00 hypermethylated 0.06186251 9.1059e-01 insignificant 1.00000 1.0000e+00 insignificant 0.11738837 1.2636e-01 insignificant 1.000000 insignificant chr2 9169203 9170203 5286 MBOAT2 ENSG00000143797 0.821679 241 7 0.503015 173 7 0.605799 206 7 0.642288 201 7 0.782819 130 6 0.732205 249 7 0.7138642 283 7 0.583709 174 7 0.5514417 231 7 0.750113 156 7 0.700884 211 7 0.492446 212 7 0.2487111 226 7 NA 0 0 0.586335 190 7 0.6895646 193 7 0.475840 256 7 0.372287 169 7 0.4162065 154 7 0.546056 208 7 0.684060 89 7 0.510132 104 5 0.783118 172 7 0.69540 119 7 0.766883 70 5 0.618027 311 7 0.544639 103 7 0.5602041 72 7 0.526043 223 7 0.552514 235 7 0.527757 253 7 0.769437 249 7 0.0095238 237 7 0.0039683 167 7 0.000000 220 6 0.0000000 63 4 0.1500000 89 6 0.0051717 359 7 0.572663 225 7 0.485000 214 7 0.599597 187 7 0.162302 177 6 0.498785 207 7 0.824651 0.4916395 0.564677 0.7114401 0.780643 0.725285 0.7067407 0.576875 0.5678525 0.7507239 0.711638 0.431494 0.2200491 NA 0.577761 0.7113314 0.4610292 0.3824761 0.422728 0.515462 0.686276 0.4370399 0.750381 0.623582 0.663370 0.6070321 0.5025106 0.580192 0.546155 0.5250877 0.4946457 0.766303 0.00542888 0.0090481 0.0000000 0.0000000 0.071661 0.0040176 0.5555541 0.4422904 0.564790 0.1663580 0.482721 4 0.5868496 0.614000 -0.01844112 7 0.598706 0.620595 -0.0218895 0.93922585 3.9520e-01 insignificant 1.00000 1.00000000 insignificant 0.899873 0.1760489 insignificant 1 1.00000 insignificant -0.03790792 0.4164661 insignificant 1 insignificant 0.5868496 0.0052863 0.58482498 7 0.598706 0.0060065 0.59269923 3.0709e-45 1.0000e+00 hypermethylated 5.1182e-43 1.0000000 hypermethylated 8.2490e-18 1.0000e+00 hypermethylated 1.3748e-15 1.000000 hypermethylated 0.5621664 8.5630e-12 hypermethylated 9.6510e-10 hypermethylated 0.586850 0.4534653 1.3551e-01 7 0.598706 0.481129 0.11757664 1.1156e-03 9.9921e-01 weaklyHypermeth 5.0708e-02 1.0000000 weaklyHypermeth 1.3857e-03 0.99989661 weaklyHypermeth 0.08426948 1.00000 weaklyHypermeth 0.1266076 1.9265e-01 insignificant 1.000000 insignificant 0.614000 0.0052863 0.6080243 7 0.620595 0.0060065 0.614589 2.3392e-43 1.0000000 hypermethylated 5.8479e-41 1.00000 hypermethylated 1.0341e-15 1.0000000 hypermethylated 1.4773e-13 1.00000 hypermethylated 0.6000743 8.1336e-11 hypermethylated 1.3556e-08 hypermethylated 0.614000 0.4534653 0.1421496 7 0.620595 0.481129 0.1394661 3.3262e-04 9.9997e-01 weaklyHypermeth 1.7841e-02 1.00000000 weaklyHypermeth 2.9034e-04 1.0000e+00 weaklyHypermeth 0.03226024 1.000000 weaklyHypermeth 0.1645155 0.1049908 insignificant 1.00000 insignificant 0.0052863 0.4534653 -0.47096029 7 0.0060065 0.481129 -0.47512259 1.0000e+00 4.6199e-21 hypomethylated 1.000000 5.1333e-19 hypomethylated 1.00000000 1.1288e-10 hypomethylated 1.00000 1.6126e-08 hypomethylated -0.43555881 3.6359e-03 weaklyHypometh 0.110773 insignificant chr2 9169703 9170703 5287 MBOAT2 ENSG00000143797 0.821679 241 7 0.503015 173 7 0.605799 206 7 0.642288 201 7 0.782819 130 6 0.732205 249 7 0.7138642 283 7 0.583709 174 7 0.5514417 231 7 0.750113 156 7 0.700884 211 7 0.492446 212 7 0.2487111 226 7 NA 0 0 0.586335 190 7 0.6895646 193 7 0.475840 256 7 0.372287 169 7 0.4162065 154 7 0.546056 208 7 0.684060 89 7 0.510132 104 5 0.783118 172 7 0.69540 119 7 0.766883 70 5 0.618027 311 7 0.544639 103 7 0.5602041 72 7 0.526043 223 7 0.552514 235 7 0.527757 253 7 0.769437 249 7 0.0095238 237 7 0.0039683 167 7 0.000000 220 6 0.0000000 63 4 0.1500000 89 6 0.0051717 359 7 0.572663 225 7 0.485000 214 7 0.599597 187 7 0.162302 177 6 0.498785 207 7 0.824651 0.4916395 0.564677 0.7114401 0.780643 0.725285 0.7067407 0.576875 0.5678525 0.7507239 0.711638 0.431494 0.2200491 NA 0.577761 0.7113314 0.4610292 0.3824761 0.422728 0.515462 0.686276 0.4370399 0.750381 0.623582 0.663370 0.6070321 0.5025106 0.580192 0.546155 0.5250877 0.4946457 0.766303 0.00542888 0.0090481 0.0000000 0.0000000 0.071661 0.0040176 0.5555541 0.4422904 0.564790 0.1663580 0.482721 4 0.5868496 0.614000 -0.01844112 7 0.598706 0.620595 -0.0218895 0.93922585 3.9520e-01 insignificant 1.00000 1.00000000 insignificant 0.899873 0.1760489 insignificant 1 1.00000 insignificant -0.03790792 0.4164661 insignificant 1 insignificant 0.5868496 0.0052863 0.58482498 7 0.598706 0.0060065 0.59269923 3.0709e-45 1.0000e+00 hypermethylated 5.1182e-43 1.0000000 hypermethylated 8.2490e-18 1.0000e+00 hypermethylated 1.3748e-15 1.000000 hypermethylated 0.5621664 8.5630e-12 hypermethylated 9.6510e-10 hypermethylated 0.586850 0.4534653 1.3551e-01 7 0.598706 0.481129 0.11757664 1.1156e-03 9.9921e-01 weaklyHypermeth 5.0708e-02 1.0000000 weaklyHypermeth 1.3857e-03 0.99989661 weaklyHypermeth 0.08426948 1.00000 weaklyHypermeth 0.1266076 1.9265e-01 insignificant 1.000000 insignificant 0.614000 0.0052863 0.6080243 7 0.620595 0.0060065 0.614589 2.3392e-43 1.0000000 hypermethylated 5.8479e-41 1.00000 hypermethylated 1.0341e-15 1.0000000 hypermethylated 1.4773e-13 1.00000 hypermethylated 0.6000743 8.1336e-11 hypermethylated 1.3556e-08 hypermethylated 0.614000 0.4534653 0.1421496 7 0.620595 0.481129 0.1394661 3.3262e-04 9.9997e-01 weaklyHypermeth 1.7841e-02 1.00000000 weaklyHypermeth 2.9034e-04 1.0000e+00 weaklyHypermeth 0.03226024 1.000000 weaklyHypermeth 0.1645155 0.1049908 insignificant 1.00000 insignificant 0.0052863 0.4534653 -0.47096029 7 0.0060065 0.481129 -0.47512259 1.0000e+00 4.6199e-21 hypomethylated 1.000000 5.1333e-19 hypomethylated 1.00000000 1.1288e-10 hypomethylated 1.00000 1.6126e-08 hypomethylated -0.43555881 3.6359e-03 weaklyHypometh 0.110773 insignificant chr2 9443703 9444703 5305 ENSG00000213772 0.847943 124 7 0.794807 71 2 0.464457 88 8 0.819666 139 8 0.859375 22 1 0.813638 399 8 0.6696429 29 1 0.860839 99 7 0.8446429 41 4 0.864502 43 2 0.853630 167 7 0.535714 17 1 0.8907315 117 7 1.000000 35 6 0.865197 75 7 0.6851852 29 2 0.773810 23 2 0.668355 194 8 0.9498208 103 5 0.771094 242 8 0.813305 105 7 0.892361 73 5 0.742662 87 6 0.67599 67 6 0.802273 63 3 0.791173 99 7 0.694921 98 7 0.6026455 45 2 0.850694 75 2 0.923923 93 7 0.692026 120 7 0.845887 273 8 0.8484754 75 7 0.8561482 87 8 0.757880 116 6 0.5964912 27 2 0.6312371 187 7 0.6567650 132 7 0.881250 105 8 0.866307 184 8 0.879221 124 3 0.884219 69 2 0.863196 117 5 0.829008 0.7324303 0.610530 0.8091471 0.852518 0.811080 0.6595738 0.780664 0.7863309 0.8742097 0.849737 0.378297 0.8194040 1.000000 0.687762 0.6130440 0.7052091 0.7980139 0.892189 0.848819 0.743869 0.8431255 0.707421 0.717789 0.747122 0.8434460 0.6920863 0.689448 0.799361 0.9202923 0.8225892 0.863568 0.82789032 0.7969960 0.8251329 0.6716014 0.624593 0.7942527 0.8324341 0.8321963 0.857478 0.8767699 0.885318 1 0.8094312 0.795322 0.01412803 7 0.669198 0.753176 -0.0839777 0.23560287 9.0736e-01 insignificant 1.00000 1.00000000 insignificant 0.123807 0.9450617 insignificant 1 1.00000 insignificant 0.01433051 0.7254891 insignificant 1 insignificant 0.8094312 0.7704655 0.04515896 8 0.669198 0.6547067 0.01449177 2.3122e-01 9.9563e-01 insignificant 1.0000e+00 1.0000000 insignificant 1.6340e-01 9.9800e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0671529 2.4763e-01 insignificant 1.0000e+00 insignificant 0.810219 0.8631052 -4.9317e-02 8 0.817909 0.874994 -0.05708466 9.5164e-01 2.5894e-02 weaklyHypometh 1.0000e+00 0.7020727 insignificant 7.7330e-01 0.08839842 insignificant 1.00000000 1.00000 insignificant -0.0831860 1.0687e-02 weaklyHypometh 0.371713 insignificant 0.795492 0.7708333 0.0351279 7 0.773745 0.6834811 0.090264 1.5078e-01 0.9412055 insignificant 9.4827e-01 1.00000 insignificant 4.4759e-01 0.9793968 insignificant 1.0000e+00 1.00000 insignificant 0.0528224 3.5249e-01 insignificant 1.0000e+00 insignificant 0.795645 0.8631052 -0.0680956 7 0.753882 0.874994 -0.1211119 9.1944e-01 5.5968e-03 weaklyHypometh 1.0000e+00 0.52279675 insignificant 9.6234e-01 5.0119e-03 weaklyHypometh 1.00000000 0.715979 insignificant -0.0975165 0.0050817 weaklyHypometh 0.39090 insignificant 0.7729469 0.8631052 -0.08596672 8 0.8001971 0.874994 -0.07479682 9.9706e-01 1.2152e-02 weaklyHypometh 1.000000 1.2658e-01 insignificant 0.99821563 2.2723e-02 weaklyHypometh 1.00000 2.8764e-01 insignificant -0.15033897 2.2047e-02 weaklyHypometh 0.329053 insignificant chr2 9810703 9811703 5329 ENSG00000200034 0.630291 89 6 0.382478 94 5 0.435811 97 3 0.553166 98 6 0.415643 86 4 0.676620 90 6 0.5019565 68 4 0.605640 119 6 0.2905518 61 2 0.611287 106 3 0.648669 172 5 0.575053 46 4 0.2194505 157 5 0.466893 84 4 0.446397 121 6 0.5000000 26 3 0.066667 13 2 0.650114 124 5 0.3274883 203 5 0.574459 115 6 0.570886 61 6 0.399786 73 4 0.318667 88 4 0.41143 68 6 0.800355 94 5 0.606801 166 6 0.280982 196 5 0.5065705 38 3 0.541857 156 5 0.501641 179 5 0.275906 194 6 0.759120 117 6 0.7308830 89 4 0.6737177 139 4 0.956439 37 3 0.7361111 28 2 0.3977502 77 6 0.7976498 218 6 0.570408 96 5 0.712798 102 6 0.456133 80 6 0.343732 97 6 0.535078 87 6 0.643271 0.4960751 0.586591 0.6661304 0.456067 0.716143 0.4451280 0.584778 0.3982571 0.5307634 0.644926 0.609633 0.2505082 0.623422 0.449073 0.2281746 0.3325420 0.5742863 0.324125 0.450848 0.511345 0.4207647 0.643571 0.589172 0.716371 0.6138597 0.3551898 0.739660 0.599164 0.6467302 0.3666473 0.759338 0.71264004 0.6130026 0.8693605 0.7901786 0.679073 0.8482573 0.4769416 0.6067602 0.436358 0.5201731 0.591710 2 0.5007618 0.554698 -0.04717157 5 0.568606 0.334466 0.2341401 0.92365832 6.8390e-01 insignificant 1.00000 1.00000000 insignificant 0.923278 0.6598279 insignificant 1 1.00000 insignificant -0.01890152 0.7604539 lowCoverage 1 lowCoverage 0.5000000 0.7371134 -0.23388169 5 0.487987 0.5634185 -0.07543179 9.8448e-01 1.2039e-06 hypomethylated 1.0000e+00 0.0012039 hypomethylated 9.8150e-01 4.8705e-05 hypomethylated 1.0000e+00 0.048705 hypomethylated -0.2364934 2.3152e-02 lowCoverage 3.6175e-01 lowCoverage 0.500765 0.5140998 -1.7471e-02 6 0.571320 0.553314 0.01800585 7.2285e-01 6.0863e-01 insignificant 1.0000e+00 1.0000000 insignificant 8.9001e-01 0.71584212 insignificant 1.00000000 1.00000 insignificant -0.0446980 5.4888e-01 lowCoverage 1.000000 lowCoverage 0.555165 0.7342419 -0.1762344 5 0.384806 0.5470767 -0.162271 9.9631e-01 0.0015977 weaklyHypometh 1.0000e+00 0.53256 insignificant 9.7955e-01 0.0016835 weaklyHypometh 1.0000e+00 0.84174 insignificant -0.2175919 3.7034e-02 lowCoverage 5.0732e-01 lowCoverage 0.556417 0.5140998 0.0326587 5 0.399784 0.553314 -0.1535298 6.0254e-01 7.8623e-01 insignificant 1.0000e+00 1.00000000 insignificant 6.3595e-01 9.0071e-01 insignificant 1.00000000 1.000000 insignificant -0.0257965 0.7505030 insignificant 1.00000 insignificant 0.7396552 0.5130435 0.21350728 5 0.6338459 0.497479 0.13636734 5.4483e-05 9.9999e-01 hypermethylated 0.013621 1.0000e+00 hypermethylated 0.00036834 9.6170e-01 hypermethylated 0.18417 1.0000e+00 insignificant 0.19179547 7.8952e-02 lowCoverage 0.831077 lowCoverage chr2 9858303 9859303 5333 ENSG00000200034 0.868286 399 16 0.692128 535 15 0.647644 409 15 0.848757 269 13 0.695869 277 13 0.813225 677 15 0.8341620 342 14 0.653656 456 15 0.7283285 389 15 0.699347 331 12 0.782710 570 15 0.726369 150 9 0.6389292 466 15 0.694013 160 10 0.689474 387 14 0.6182315 136 8 0.610398 120 12 0.697797 339 12 0.7503283 432 15 0.767849 627 15 0.698364 267 13 0.550623 161 12 0.673736 377 15 0.58189 260 13 0.765153 139 9 0.796747 626 15 0.620872 360 14 0.6666844 260 14 0.755693 509 15 0.711298 702 16 0.765848 694 16 0.891016 640 16 0.3775423 558 15 0.1188296 420 14 0.345519 688 14 0.5976856 101 11 0.2924852 449 15 0.4789230 656 16 0.650442 407 15 0.677872 535 15 0.809341 268 14 0.646370 327 12 0.772219 350 16 0.846364 0.6714464 0.633424 0.8277394 0.721755 0.827941 0.7797063 0.707935 0.7143383 0.7819798 0.803453 0.724508 0.6199194 0.735130 0.702849 0.6553007 0.5908957 0.6752389 0.695184 0.774991 0.741914 0.6661575 0.761615 0.677063 0.834706 0.7774524 0.6779593 0.785952 0.758141 0.7255830 0.7451874 0.879867 0.35946467 0.1236982 0.3988285 0.7271097 0.264258 0.5104896 0.7372925 0.7503013 0.769388 0.6960679 0.793959 11 0.7473219 0.753908 -0.01611347 15 0.766210 0.735307 0.0309027 0.65363237 4.3835e-01 insignificant 1.00000 1.00000000 insignificant 0.317112 0.2265558 insignificant 1 1.00000 insignificant 0.01638145 0.6202097 insignificant 1 insignificant 0.7470541 0.3157895 0.40675736 15 0.707386 0.3877000 0.31968651 2.4440e-58 1.0000e+00 hypermethylated 8.1466e-56 1.0000000 hypermethylated 2.5577e-19 1.0000e+00 hypermethylated 6.3942e-17 1.000000 hypermethylated 0.3543777 2.5134e-03 weaklyHypermeth 6.9816e-02 weaklyHypermeth 0.747054 0.7453581 5.3667e-03 14 0.707386 0.687355 0.02003137 3.3680e-02 1.9021e-01 weaklyHypermeth 7.8325e-01 1.0000000 insignificant 2.7807e-01 0.04001819 inconclusive 1.00000000 1.00000 insignificant 0.0116265 7.6668e-01 insignificant 1.000000 insignificant 0.753405 0.3152212 0.4208817 15 0.666679 0.3106055 0.356074 1.7357e-41 1.0000000 hypermethylated 3.4714e-39 1.00000 hypermethylated 1.8143e-16 1.0000000 hypermethylated 3.6286e-14 1.00000 hypermethylated 0.3379963 2.4569e-03 weaklyHypermeth 5.9888e-02 weaklyHypermeth 0.754010 0.7457537 0.0184651 14 0.750014 0.730315 0.0196992 1.8344e-01 1.0309e-01 insignificant 1.0000e+00 1.00000000 insignificant 6.2365e-01 1.7541e-01 insignificant 1.00000000 1.000000 insignificant -0.0047550 0.9150576 insignificant 1.00000 insignificant 0.3157895 0.7453581 -0.40915045 14 0.3877000 0.687355 -0.29965514 1.0000e+00 7.8925e-24 hypomethylated 1.000000 1.5785e-21 hypomethylated 0.99999985 3.0488e-11 hypomethylated 1.00000 6.0976e-09 hypomethylated -0.34275126 2.2792e-03 weaklyHypometh 0.087606 weaklyHypometh chr2 9876603 9877603 5335 ENSG00000200034 0.757994 398 13 0.682645 236 13 0.603187 161 13 0.743676 231 13 0.753455 126 13 0.813337 435 13 0.7682089 172 13 0.676804 216 11 0.6421245 120 13 0.758715 169 13 0.716320 427 13 0.851723 126 8 0.7390805 175 12 0.876190 49 6 0.802378 217 13 0.6222833 99 8 0.575273 107 8 0.782524 248 13 0.7569512 207 13 0.849677 295 13 0.830556 72 9 0.707808 90 11 0.751054 231 13 0.71927 83 9 0.892674 71 9 0.660879 300 13 0.719723 112 7 0.5920330 43 4 0.747401 157 9 0.690163 224 12 0.758288 263 13 0.800794 466 13 0.6177502 137 12 0.6606164 196 13 0.700190 195 13 0.7831118 119 8 0.6740700 105 9 0.7036888 294 13 0.711870 350 13 0.780364 388 13 0.760307 276 13 0.774700 281 13 0.790029 347 15 0.752086 0.6913722 0.560797 0.7916687 0.792558 0.801501 0.8002611 0.740962 0.6768519 0.7764606 0.794033 0.834803 0.7928846 0.813460 0.828711 0.6795525 0.6141217 0.8246677 0.778084 0.825546 0.853434 0.7147409 0.798072 0.761169 0.913657 0.7181006 0.7604827 0.626704 0.779049 0.7210874 0.7785497 0.777418 0.64156359 0.6857753 0.7250241 0.7593246 0.714964 0.6433184 0.8273337 0.7814931 0.783854 0.8065070 0.820257 4 0.7513052 0.754735 0.00986081 13 0.784757 0.763366 0.0213918 0.51324887 8.6446e-01 insignificant 1.00000 1.00000000 insignificant 0.967619 0.4012785 insignificant 1 1.00000 insignificant -0.00059302 0.9840983 insignificant 1 insignificant 0.7512473 0.6854685 0.07292498 13 0.775258 0.7433675 0.03189073 3.7847e-05 9.9994e-01 weaklyHypermeth 4.8522e-04 1.0000000 weaklyHypermeth 2.8862e-03 9.9947e-01 weaklyHypermeth 5.0636e-02 1.000000 weaklyHypermeth 0.0487227 1.2126e-01 insignificant 1.0000e+00 insignificant 0.751246 0.7783191 -3.1950e-02 13 0.773995 0.791733 -0.01773749 9.9186e-01 5.4755e-02 insignificant 1.0000e+00 1.0000000 insignificant 9.7874e-01 0.06860587 insignificant 1.00000000 1.00000 insignificant -0.0248267 2.9880e-01 insignificant 1.000000 insignificant 0.754860 0.6854685 0.0643312 13 0.764773 0.7433675 0.021405 3.5164e-03 0.9981687 weaklyHypermeth 3.2864e-02 1.00000 weaklyHypermeth 1.0292e-02 0.9995641 weaklyHypermeth 1.2865e-01 1.00000 insignificant 0.0493157 1.4638e-01 insignificant 1.0000e+00 insignificant 0.754976 0.7783191 -0.0390037 13 0.776534 0.791733 -0.0151989 9.8713e-01 1.1556e-01 insignificant 1.0000e+00 1.00000000 insignificant 7.8259e-01 6.9953e-01 insignificant 1.00000000 1.000000 insignificant -0.0242337 0.3762778 insignificant 1.00000 insignificant 0.6854685 0.7780488 -0.10472080 13 0.7433675 0.780771 -0.03740387 9.9906e-01 5.9749e-06 weaklyHypometh 1.000000 1.4937e-04 weaklyHypometh 0.99988896 6.2982e-04 weaklyHypometh 1.00000 1.6308e-02 weaklyHypometh -0.07354942 2.3823e-02 weaklyHypometh 0.350334 insignificant chr2 10113603 10114603 5341 KLF11 ENSG00000172059 0.775040 189 7 0.645766 145 7 0.401361 55 6 0.782820 182 6 0.714286 34 4 0.712245 234 7 0.5679440 55 5 0.715721 85 5 0.5556122 45 6 0.824830 28 3 0.665598 191 7 0.513889 13 0 0.6770997 60 5 0.800000 19 3 0.523993 49 4 0.4000000 11 0 0.208333 12 0 0.683496 279 6 0.5967387 110 6 0.542432 226 7 0.582812 54 6 0.399201 51 4 0.607871 71 6 0.68305 60 4 0.695628 170 7 0.572552 142 7 0.632839 54 4 0.2666667 16 1 0.571906 119 6 0.668161 131 7 0.482878 201 7 0.673698 197 7 0.4680793 165 7 0.4873625 112 7 0.446667 103 5 0.3709764 136 5 0.4935119 104 6 0.3863618 229 7 0.604581 141 6 0.709552 156 7 0.594747 162 6 0.486928 116 5 0.644135 153 7 0.723022 0.5284696 0.177536 0.7199929 0.594203 0.699256 0.4087724 0.610973 0.4429089 0.7349896 0.618986 0.507246 0.5439560 0.636903 0.396600 0.2427129 0.2660020 0.6008724 0.512042 0.452442 0.390942 0.2013902 0.520913 0.550875 0.615196 0.4325253 0.5868938 0.227639 0.446451 0.5717266 0.3534690 0.624243 0.43609265 0.5630065 0.4915040 0.3779007 0.589206 0.3899745 0.4338274 0.6285455 0.449686 0.4925700 0.535762 0 0.6562809 0.623613 0.02492222 6 0.675344 0.658894 0.0164499 0.26031638 9.1660e-01 insignificant 1.00000 1.00000000 insignificant 0.104360 0.9800164 insignificant 1 1.00000 insignificant 0.04558864 0.3793141 lowCoverage 1 lowCoverage 0.6561108 0.4033019 0.24080618 6 0.628964 0.4650460 0.16391804 3.6129e-15 1.1682e-01 hypermethylated 1.0626e-13 1.0000000 hypermethylated 3.2296e-07 2.3255e-01 hypermethylated 1.1962e-05 1.000000 hypermethylated 0.1732004 2.9489e-04 lowCoverage 1.0599e-02 lowCoverage 0.656111 0.6112637 5.8029e-02 6 0.628964 0.616726 0.01223825 9.3676e-02 2.9005e-01 insignificant 1.0000e+00 1.0000000 insignificant 3.0036e-01 0.69361912 insignificant 1.00000000 1.00000 insignificant 0.0073713 8.8595e-01 lowCoverage 1.000000 lowCoverage 0.623613 0.4028269 0.1856619 7 0.658894 0.4069153 0.251978 1.5285e-07 0.0677304 weaklyHypermeth 3.2520e-06 1.00000 weaklyHypermeth 1.0606e-03 0.1904953 weaklyHypermeth 1.9641e-02 1.00000 weaklyHypermeth 0.1276118 9.0956e-03 weaklyHypermeth 1.8191e-01 insignificant 0.623016 0.6112637 0.0275941 6 0.610164 0.616726 -0.0065617 3.5797e-01 5.3573e-02 insignificant 1.0000e+00 1.00000000 insignificant 8.3247e-01 9.4863e-02 insignificant 1.00000000 1.000000 insignificant -0.0382174 0.4771072 insignificant 1.00000 insignificant 0.4033019 0.6112637 -0.18843682 6 0.4650460 0.616726 -0.15167979 6.1814e-01 2.9462e-06 weaklyHypometh 1.000000 7.9627e-05 weaklyHypometh 0.56632893 1.9776e-04 weaklyHypometh 1.00000 6.1800e-03 weaklyHypometh -0.16582913 6.3641e-03 weaklyHypometh 0.144639 insignificant chr2 10311403 10312403 5347 ENSG00000206647 0.793070 101 7 0.333333 18 2 0.200000 10 2 0.688782 114 7 0.687500 16 2 0.812124 97 7 0.1666667 5 0 0.633333 30 2 0.8333333 5 0 0.500000 10 2 0.754762 41 2 NA 0 0 0.2857143 14 2 1.000000 7 0 0.416667 12 2 NA 0 0 NA 0 0 0.739723 155 3 0.7896605 72 2 0.848391 50 2 0.488095 17 1 0.505051 20 2 0.750000 20 2 0.83333 12 2 0.605808 121 2 0.857143 68 7 0.433333 18 1 0.1875000 18 2 0.568562 49 2 0.814713 76 7 0.800000 38 2 0.790446 93 7 0.5526316 38 2 0.1571429 70 2 0.857143 127 7 0.7554160 161 7 0.3424242 22 2 0.6539683 114 7 0.708647 64 7 0.827329 93 7 0.831746 67 2 0.802198 57 2 0.725776 88 7 0.572123 0.3333333 0.200000 0.5204482 0.629630 0.624691 0.1975309 0.651852 0.8024691 0.4814815 0.764903 NA 0.3121693 1.000000 0.432099 NA NA 0.2147982 0.446340 0.491875 0.516755 0.4956977 0.648148 0.864198 0.603731 0.5000000 0.4518519 0.152778 0.577233 0.4170692 0.3061728 0.778371 0.57699805 0.1650794 0.4074074 0.2125356 0.553199 0.3259259 0.1746589 0.3948470 0.446091 0.3005698 0.171659 0 0.5574637 0.630909 -0.07687383 2 0.750927 0.803433 -0.0525064 0.95247834 2.1825e-02 lowCoverage 1.00000 0.93348871 lowCoverage 0.979096 0.2104771 lowCoverage 1 1.00000 lowCoverage -0.01951478 0.8208552 lowCoverage 1 lowCoverage 0.5574637 0.6290019 0.09004550 2 0.750927 0.7716016 -0.02067460 5.0871e-01 6.5578e-02 lowCoverage 1.0000e+00 1.0000000 lowCoverage 4.6599e-01 6.3059e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 0.0635296 6.1960e-01 lowCoverage 1.0000e+00 lowCoverage 0.557464 0.5365854 9.8442e-02 2 0.750927 0.777962 -0.02703492 4.8729e-01 2.1938e-03 lowCoverage 1.0000e+00 0.2405819 lowCoverage 4.5669e-01 0.05256070 lowCoverage 1.00000000 1.00000 lowCoverage -0.1624887 2.3623e-02 lowCoverage 0.586137 lowCoverage 0.630909 0.6290019 0.1701470 2 0.803433 0.7716016 0.031832 5.6784e-02 0.6476675 lowCoverage 3.9709e-01 1.00000 lowCoverage 2.3045e-01 0.9897759 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.0830444 5.1708e-01 lowCoverage 1.0000e+00 lowCoverage 0.630909 0.5365854 0.1744440 2 0.803433 0.777962 0.0254715 3.2830e-02 1.9227e-01 lowCoverage 6.7853e-01 1.00000000 lowCoverage 1.5793e-01 5.2182e-01 lowCoverage 1.00000000 1.000000 lowCoverage -0.1429739 0.0451397 lowCoverage 1.00000 lowCoverage 0.6290019 0.5365854 0.00318500 7 0.7716016 0.777962 -0.00636032 9.2718e-01 2.8037e-01 insignificant 1.000000 1.0000e+00 insignificant 0.95795623 2.5391e-01 insignificant 1.00000 1.0000e+00 insignificant -0.22601824 8.9867e-02 lowCoverage 0.903345 lowCoverage chr2 10329803 10330803 5348 ENSG00000206647 0.729705 183 6 0.728191 169 8 0.672385 123 8 0.707043 126 7 0.789552 84 8 0.618396 287 6 0.6688243 132 8 0.779569 115 8 0.6828804 109 6 0.711857 95 6 0.690309 186 8 0.745192 71 6 0.5968459 120 6 0.684524 29 3 0.759327 126 6 0.7103175 62 6 0.574146 465 6 0.716650 126 6 0.6325188 151 6 0.720947 296 8 0.720292 78 7 0.786493 77 4 0.658929 136 8 0.70477 106 8 0.816536 91 6 0.719090 199 8 0.650231 95 4 0.7081871 77 4 0.696875 72 4 0.695381 239 8 0.676333 195 8 0.669516 328 8 0.6843891 124 8 0.7065649 116 6 0.737321 177 6 0.7053571 128 6 0.6834046 173 8 0.6517590 177 8 0.734114 215 6 0.770924 218 6 0.797596 186 6 0.707717 169 6 0.720596 225 8 0.728870 0.7399407 0.675491 0.7424499 0.824603 0.666000 0.7576847 0.757735 0.6192685 0.7498946 0.681193 0.770783 0.6838299 0.747813 0.713535 0.7890843 0.7006053 0.7659490 0.667518 0.720592 0.761309 0.8095064 0.634661 0.681871 0.862479 0.7816593 0.6997453 0.748048 0.692545 0.7291652 0.6927851 0.690377 0.69236376 0.6778249 0.7293457 0.7665073 0.652751 0.6399225 0.7805879 0.8038607 0.799792 0.8089066 0.780322 4 0.7017027 0.759008 -0.00831117 6 0.720954 0.619692 0.1012619 0.86954720 4.1847e-01 insignificant 1.00000 1.00000000 insignificant 0.646903 0.8208694 insignificant 1 1.00000 insignificant -0.01259372 0.5164342 insignificant 1 insignificant 0.7017027 0.7675978 0.02363122 6 0.720954 0.7211490 -0.00019474 1.4570e-01 6.4510e-01 insignificant 9.5855e-01 1.0000000 insignificant 4.9528e-01 8.6106e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0011597 9.4758e-01 insignificant 1.0000e+00 insignificant 0.701605 0.7828233 -7.8769e-02 6 0.686074 0.753003 -0.06692916 9.8971e-01 7.5122e-04 weaklyHypometh 1.0000e+00 0.1502430 insignificant 9.8586e-01 0.00574923 weaklyHypometh 1.00000000 0.44101 insignificant -0.0502303 3.9160e-02 weaklyHypometh 0.753071 insignificant 0.759008 0.7675978 0.0299495 8 0.619692 0.7211490 -0.101457 1.8130e-01 0.8658522 insignificant 1.0000e+00 1.00000 insignificant 4.2989e-01 0.8761870 insignificant 1.0000e+00 1.00000 insignificant 0.0137534 4.6751e-01 insignificant 1.0000e+00 insignificant 0.759456 0.7828233 -0.0652633 6 0.697154 0.753003 -0.0558488 9.7116e-01 5.7508e-03 weaklyHypometh 1.0000e+00 0.52279675 insignificant 9.8149e-01 1.2302e-02 weaklyHypometh 1.00000000 1.000000 insignificant -0.0376365 0.1162139 insignificant 1.00000 insignificant 0.7670773 0.7828233 -0.09496838 6 0.6862927 0.753003 -0.06671007 7.7646e-01 9.0649e-03 weaklyHypometh 1.000000 9.8531e-02 weaklyHypometh 0.91972837 6.9577e-02 insignificant 1.00000 7.4018e-01 insignificant -0.05138995 3.7531e-02 weaklyHypometh 0.475912 insignificant chr2 10335403 10336403 5349 ENSG00000206647 0.651763 225 5 0.847556 96 4 0.927513 114 4 0.831782 257 5 0.683333 45 4 0.938890 230 7 0.9528139 86 4 0.956475 100 5 0.8249614 83 5 0.962126 173 4 0.798574 122 5 0.959207 51 4 0.9047133 152 5 0.982143 94 4 0.909000 100 5 0.7777778 37 4 0.850849 179 5 0.867375 346 6 0.8606593 60 4 0.748490 275 6 0.933862 40 5 0.806667 72 5 0.715512 127 4 0.91921 57 5 0.975000 64 4 0.917336 119 5 0.900000 48 4 0.8570707 64 5 0.906667 67 4 0.969139 107 4 0.984000 109 4 0.694084 187 6 0.6671652 125 5 0.9312821 61 4 0.936364 100 5 0.7033868 59 4 0.7301587 25 2 0.7742754 98 4 0.880719 196 5 0.861203 238 7 0.928152 246 5 0.709409 347 6 0.903356 326 6 0.916928 0.9344689 0.919790 0.9384165 0.881498 0.940768 0.9418159 0.948857 0.8560504 0.9571399 0.968755 0.945997 0.9359099 0.979888 0.948348 0.9114048 0.8382279 0.9073162 0.897962 0.914954 0.956157 0.8870044 0.930755 0.921030 0.969989 0.9385502 0.8805066 0.948298 0.948018 0.9631158 0.9820264 0.917755 0.85958913 0.9245002 0.9187024 0.8255789 0.897420 0.8538834 0.9062804 0.9112892 0.959292 0.9300024 0.931936 4 0.9224504 0.930189 -0.00362098 5 0.714100 0.745376 -0.0312759 0.50576883 2.4893e-01 insignificant 1.00000 1.00000000 insignificant 0.649969 0.1174095 insignificant 1 1.00000 insignificant -0.01974531 0.5768766 lowCoverage 1 lowCoverage 0.9255358 0.8717949 0.04869444 5 0.801705 0.7171250 0.08458040 3.0488e-03 9.7160e-01 weaklyHypermeth 2.8230e-02 1.0000000 weaklyHypermeth 4.1698e-01 8.1293e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0713615 2.1174e-01 lowCoverage 1.0000e+00 lowCoverage 0.924060 0.8987435 1.9966e-02 5 0.889557 0.845317 0.04424046 4.4482e-02 5.0947e-01 weaklyHypermeth 1.0000e+00 1.0000000 insignificant 2.0635e-01 0.73507629 insignificant 1.00000000 1.00000 insignificant 0.0052325 9.0851e-01 lowCoverage 1.000000 lowCoverage 0.934034 0.8717949 0.0528259 5 0.875206 0.7171250 0.158081 1.0878e-02 0.9994919 weaklyHypermeth 8.9168e-02 1.00000 weaklyHypermeth 1.2643e-01 0.9959619 insignificant 9.7256e-01 1.00000 insignificant 0.0911068 1.3428e-01 lowCoverage 1.0000e+00 lowCoverage 0.932701 0.8987435 0.0095423 5 0.863102 0.845317 0.0177856 2.1225e-01 7.6493e-01 insignificant 1.0000e+00 1.00000000 insignificant 1.4812e-01 6.9832e-01 insignificant 1.00000000 1.000000 insignificant 0.0249778 0.6122778 lowCoverage 1.00000 lowCoverage 0.8831169 0.9151090 -0.04207777 5 0.8605500 0.899111 -0.03856137 9.5568e-01 1.6329e-01 insignificant 1.000000 1.0000e+00 insignificant 0.62193406 6.8360e-01 insignificant 1.00000 1.0000e+00 insignificant -0.06612892 3.0786e-01 lowCoverage 1.000000 lowCoverage chr2 10354603 10355603 5353 ENSG00000206898 0.874596 71 5 0.610755 129 5 0.809524 77 5 0.890667 93 5 0.942857 20 2 0.890769 169 5 0.8933333 30 3 0.853480 147 5 0.7555556 74 5 0.921795 64 5 0.882605 101 5 0.942857 20 2 0.8130554 102 5 0.943810 66 5 0.911492 68 5 1.0000000 9 0 0.900000 8 0 0.910000 96 5 0.7968841 83 5 0.826364 131 5 1.000000 52 3 0.813861 76 5 0.883333 48 5 0.91893 56 5 0.861010 51 5 0.938032 89 5 0.797905 83 5 0.7592593 37 5 0.840000 85 5 0.812631 88 5 0.798887 88 3 0.853257 120 5 0.8698554 99 5 0.7961905 59 5 1.000000 5 0 1.0000000 9 0 0.8065008 57 3 0.7664171 130 5 0.774359 66 5 0.855897 56 5 0.850000 50 5 0.928485 43 5 0.890028 83 5 0.862921 0.5803006 0.805556 0.8838889 0.928571 0.889744 0.9111111 0.865537 0.7546296 0.9155983 0.892912 0.928571 0.8047391 0.953175 0.892974 1.0000000 0.9166667 0.9125000 0.764070 0.831494 1.000000 0.7972649 0.888889 0.915774 0.861448 0.9298413 0.7959921 0.888889 0.816667 0.7962398 0.7907392 0.846464 0.89154616 0.8063492 0.9251291 1.0000000 0.810973 0.7609031 0.7757937 0.8532051 0.861111 0.9265152 0.896849 0 0.8504493 0.878580 -0.02846823 5 0.872248 0.720287 0.1519603 0.95886780 1.0747e-01 insignificant 1.00000 1.00000000 insignificant 0.786985 0.6708929 insignificant 1 1.00000 insignificant 0.01209468 0.6628938 lowCoverage 1 lowCoverage 0.8503532 0.7994429 0.05265376 5 0.846697 0.8056464 0.04105071 1.0391e-02 6.7463e-02 weaklyHypermeth 8.8057e-02 1.0000000 weaklyHypermeth 6.2312e-01 9.7321e-02 insignificant 1.0000e+00 1.000000 insignificant -0.0046407 9.2316e-01 lowCoverage 1.0000e+00 lowCoverage 0.850353 0.8557047 -6.3692e-03 5 0.846697 0.853955 -0.00725770 5.7180e-01 5.2584e-02 insignificant 1.0000e+00 1.0000000 insignificant 4.4417e-01 0.40532132 insignificant 1.00000000 1.00000 insignificant 0.0087661 7.8893e-01 lowCoverage 1.000000 lowCoverage 0.880597 0.7994429 0.0838473 5 0.864345 0.8056464 0.058698 1.5081e-03 0.3989762 weaklyHypermeth 1.6043e-02 1.00000 weaklyHypermeth 5.5175e-01 0.2418968 insignificant 1.0000e+00 1.00000 insignificant -0.0167353 7.3096e-01 lowCoverage 1.0000e+00 lowCoverage 0.880597 0.8557047 0.0192011 5 0.864345 0.853955 0.0103900 1.8272e-01 3.3154e-01 insignificant 1.0000e+00 1.00000000 insignificant 3.0126e-01 5.2868e-01 insignificant 1.00000000 1.000000 insignificant -0.0033286 0.9202963 lowCoverage 1.00000 lowCoverage 0.7994429 0.8557047 -0.05350636 5 0.8056464 0.853955 -0.04830841 5.9177e-01 1.9965e-01 insignificant 1.000000 1.0000e+00 insignificant 0.30759547 8.4075e-01 insignificant 1.00000 1.0000e+00 insignificant 0.01340677 7.9340e-01 lowCoverage 1.000000 lowCoverage chr2 10388303 10389303 5358 HPCAL1 ENSG00000115756 0.837832 757 17 0.613289 842 17 0.606505 805 17 0.753615 801 15 0.675389 497 17 0.854481 1156 17 0.7016379 524 18 0.716140 682 15 0.6548744 582 18 0.638573 708 17 0.744760 921 18 0.708355 436 17 0.6480261 890 18 0.726657 368 14 0.746366 875 17 0.6593970 400 17 0.613297 149 10 0.551177 969 17 0.7294618 880 17 0.621153 845 17 0.719072 327 15 0.737401 346 14 0.785891 492 17 0.74800 412 17 0.738499 222 13 0.779738 966 17 0.642914 656 15 0.5793772 357 17 0.735187 911 15 0.751555 1045 17 0.697266 1025 17 0.749337 936 17 0.6668271 766 17 0.6416160 611 17 0.791268 806 14 0.7247216 213 12 0.5002924 604 18 0.7433412 810 17 0.862739 768 15 0.802074 772 17 0.623570 670 15 0.791526 709 16 0.603860 934 15 0.768046 0.6423511 0.629941 0.7824128 0.735233 0.850685 0.7397044 0.719395 0.7353327 0.7778223 0.795607 0.772117 0.7122051 0.758151 0.782339 0.7623488 0.5654059 0.6966105 0.764972 0.683079 0.786361 0.7564490 0.797033 0.711372 0.776431 0.7712055 0.6846117 0.805782 0.768708 0.7356993 0.7263617 0.842620 0.73470608 0.6639345 0.8508112 0.8057944 0.603752 0.7356846 0.8208989 0.7788838 0.716893 0.7625555 0.664630 14 0.7390996 0.764561 -0.02489680 17 0.621302 0.629898 -0.0085960 0.99472992 7.4509e-02 insignificant 1.00000 1.00000000 insignificant 0.999165 0.1633929 insignificant 1 1.00000 insignificant -0.03197099 0.1955948 insignificant 1 insignificant 0.7392355 0.7256498 0.00091479 17 0.664137 0.6241300 0.04000714 2.8611e-03 1.8960e-03 weaklyHypermeth 2.6739e-02 0.2708513 weaklyHypermeth 3.5470e-01 3.4082e-02 inconclusive 1.0000e+00 1.000000 insignificant 0.0120383 7.9775e-01 insignificant 1.0000e+00 insignificant 0.739183 0.7233325 2.7696e-05 15 0.671598 0.749927 -0.07832953 6.3780e-01 1.0341e-02 inconclusive 1.0000e+00 0.4136547 insignificant 9.6509e-01 0.04109321 inconclusive 1.00000000 1.00000 insignificant -0.0467045 4.3170e-01 insignificant 1.000000 insignificant 0.764637 0.7254593 0.0239059 17 0.625302 0.5981246 0.027177 2.0691e-03 0.0464814 weaklyHypermeth 2.0900e-02 1.00000 weaklyHypermeth 2.0479e-01 0.2051666 insignificant 1.0000e+00 1.00000 insignificant 0.0440093 3.6253e-01 insignificant 1.0000e+00 insignificant 0.765234 0.7233325 0.0185125 15 0.675654 0.749927 -0.0742734 1.3793e-01 3.9149e-01 insignificant 1.0000e+00 1.00000000 insignificant 5.5790e-01 5.5485e-01 insignificant 1.00000000 1.000000 insignificant -0.0147335 0.7978092 insignificant 1.00000 insignificant 0.7258870 0.7232606 -0.00724069 15 0.6518249 0.738019 -0.08619432 3.5319e-01 4.4194e-01 insignificant 1.000000 1.0000e+00 insignificant 0.81397937 6.9617e-01 insignificant 1.00000 1.0000e+00 insignificant -0.05874283 4.0248e-01 insignificant 1.000000 insignificant chr2 10388603 10389603 5359 HPCAL1 ENSG00000115756 0.829297 748 16 0.639561 836 16 0.610096 794 16 0.744469 790 14 0.671836 493 17 0.845921 1146 16 0.7254083 516 17 0.706114 670 14 0.6449601 576 17 0.644346 700 16 0.740681 910 17 0.735317 432 17 0.6444930 872 17 0.707132 365 14 0.748253 861 16 0.6981850 399 17 0.619260 145 10 0.534291 960 16 0.7266197 871 16 0.620939 837 16 0.709327 319 14 0.735960 325 13 0.781933 485 16 0.74255 398 16 0.723972 218 13 0.782824 955 16 0.641783 644 14 0.5836766 336 16 0.737141 901 14 0.750516 1032 16 0.696321 1011 16 0.738680 919 16 0.6589934 751 16 0.6494835 603 16 0.780251 783 13 0.7174809 201 11 0.5120108 591 17 0.7346175 799 16 0.873058 762 14 0.791657 765 16 0.631293 664 14 0.779263 706 16 0.599935 928 14 0.764635 0.6493464 0.631184 0.7805499 0.735016 0.848490 0.7469059 0.716494 0.7338916 0.7819079 0.795275 0.779796 0.7120578 0.754595 0.783340 0.7735598 0.5663677 0.6937828 0.764783 0.683934 0.785057 0.7563688 0.796149 0.709228 0.773144 0.7718516 0.6848756 0.810629 0.769718 0.7352062 0.7265393 0.841171 0.73374587 0.6663453 0.8492566 0.8053894 0.609237 0.7331345 0.8231670 0.7756321 0.720082 0.7590636 0.664600 14 0.7393648 0.764854 -0.02478660 16 0.617626 0.625279 -0.0076523 0.99303748 7.3457e-02 insignificant 1.00000 1.00000000 insignificant 0.998689 0.1766882 insignificant 1 1.00000 insignificant -0.02686427 0.2621605 insignificant 1 insignificant 0.7395024 0.7252482 0.00130185 16 0.661740 0.6186858 0.04305451 1.9984e-03 1.5588e-03 weaklyHypermeth 1.9496e-02 0.2598013 weaklyHypermeth 3.1206e-01 3.0941e-02 inconclusive 1.0000e+00 1.000000 insignificant 0.0163863 7.0653e-01 insignificant 1.0000e+00 insignificant 0.739449 0.7231373 3.2450e-04 14 0.669442 0.749924 -0.08048177 5.9688e-01 9.0410e-03 inconclusive 1.0000e+00 0.4109555 insignificant 9.5306e-01 0.04111285 inconclusive 1.00000000 1.00000 insignificant -0.0431821 4.6302e-01 insignificant 1.000000 insignificant 0.764932 0.7250536 0.0242996 16 0.619880 0.5917864 0.028094 1.5968e-03 0.0384701 weaklyHypermeth 1.6808e-02 1.00000 weaklyHypermeth 1.8275e-01 0.1830994 insignificant 1.0000e+00 1.00000 insignificant 0.0432505 3.3379e-01 insignificant 1.0000e+00 insignificant 0.765542 0.7231373 0.0186908 14 0.672114 0.749924 -0.0778102 1.2106e-01 3.6454e-01 insignificant 1.0000e+00 1.00000000 insignificant 5.5288e-01 5.0651e-01 insignificant 1.00000000 1.000000 insignificant -0.0163179 0.7756145 insignificant 1.00000 insignificant 0.7254902 0.7230649 -0.00725216 14 0.6472211 0.737420 -0.09019915 3.2377e-01 4.1673e-01 insignificant 1.000000 1.0000e+00 insignificant 0.77325613 7.0370e-01 insignificant 1.00000 1.0000e+00 insignificant -0.05956842 3.8170e-01 insignificant 1.000000 insignificant chr2 10447903 10448903 5369 HPCAL1 ENSG00000115756 0.900456 107 5 0.828700 298 5 0.867962 144 5 0.943007 110 5 0.923199 85 5 0.736008 238 5 0.8120079 108 5 0.853658 167 5 0.7943735 134 5 0.958758 120 5 0.929264 237 5 0.806796 63 5 0.9423878 167 5 0.782949 82 5 0.803431 143 5 0.8761905 43 4 0.900000 20 2 0.920105 129 5 0.9003582 299 5 0.919505 194 5 0.876442 85 4 0.924302 63 5 0.916629 156 5 0.87279 99 5 0.781250 43 3 0.757588 284 5 0.759937 121 5 0.8465608 77 5 0.948189 213 5 0.928717 334 5 0.765830 296 5 0.892824 179 5 0.6555024 248 5 0.7115686 107 5 0.507576 82 4 0.6666667 17 1 0.4023811 198 5 0.7252483 230 5 0.850385 118 5 0.904253 100 5 0.923307 94 5 0.953846 71 4 0.917154 106 5 0.903907 0.8174222 0.860656 0.9393044 0.911135 0.888170 0.8303180 0.848364 0.8032563 0.9616177 0.921970 0.835508 0.9361646 0.799315 0.820020 0.9086404 0.9126418 0.9089807 0.876207 0.906820 0.896124 0.9216009 0.901945 0.856086 0.932975 0.9051444 0.7576454 0.870016 0.943024 0.9213128 0.9153061 0.887753 0.60230997 0.5949162 0.5665943 0.6757164 0.476078 0.6724884 0.8713019 0.8869108 0.928562 0.9415245 0.900528 4 0.8822715 0.898974 -0.01457334 5 0.864268 0.817943 0.0463244 0.88023056 5.0608e-01 insignificant 1.00000 1.00000000 insignificant 0.782824 0.5921142 insignificant 1 1.00000 insignificant 0.01403399 0.5834842 lowCoverage 1 lowCoverage 0.8821899 0.6417234 0.20658512 5 0.841646 0.6123352 0.22931043 6.5795e-19 9.1311e-01 hypermethylated 2.2688e-17 1.0000000 hypermethylated 2.5897e-03 6.3594e-01 weaklyHypermeth 4.7085e-02 1.000000 weaklyHypermeth 0.2584653 3.4964e-03 lowCoverage 8.5576e-02 lowCoverage 0.882190 0.9141104 -2.1770e-02 5 0.841646 0.919979 -0.07833337 8.7643e-01 1.0479e-01 insignificant 1.0000e+00 1.0000000 insignificant 6.8318e-01 0.21960186 insignificant 1.00000000 1.00000 insignificant -0.0398335 1.0076e-01 lowCoverage 1.000000 lowCoverage 0.898923 0.6417234 0.2401008 5 0.787601 0.6123352 0.175265 5.2278e-16 0.8562452 hypermethylated 1.9362e-14 1.00000 hypermethylated 3.7475e-03 0.6409130 weaklyHypermeth 5.7653e-02 1.00000 weaklyHypermeth 0.2444313 3.9007e-03 lowCoverage 8.4799e-02 lowCoverage 0.898923 0.9141104 -0.0106445 5 0.787601 0.919979 -0.1323785 8.0532e-01 3.0760e-01 insignificant 1.0000e+00 1.00000000 insignificant 6.7629e-01 4.2607e-01 insignificant 1.00000000 1.000000 insignificant -0.0538675 0.0644187 lowCoverage 1.00000 lowCoverage 0.6417234 0.9141104 -0.23913099 5 0.6123352 0.919979 -0.30764380 8.3403e-01 2.1934e-08 hypomethylated 1.000000 8.1237e-07 hypomethylated 0.68883882 2.6445e-02 weaklyHypometh 1.00000 3.2446e-01 insignificant -0.29829878 1.6278e-03 lowCoverage 0.070772 lowCoverage chr2 10464103 10465103 5372 HPCAL1 ENSG00000115756 0.952079 271 8 0.876452 340 8 0.881278 210 8 0.987788 137 8 0.659185 114 8 0.944087 315 8 0.9030664 240 8 0.965414 207 8 0.8761736 262 8 0.911162 180 8 0.939750 335 8 0.834646 173 8 0.9515788 272 8 0.876263 49 3 0.929412 250 8 0.9167948 99 7 0.919568 122 6 0.922596 163 8 0.9420851 344 8 0.842263 343 8 0.781003 89 6 0.728175 68 5 0.958227 248 8 0.85557 137 5 0.977273 61 6 0.941897 387 8 0.794713 158 8 0.7998791 136 8 0.965265 257 8 0.944363 442 8 0.944134 346 8 0.924241 347 8 0.8663116 328 8 0.7063320 203 8 0.786667 91 5 0.8515625 97 6 0.8252751 156 8 0.9757480 417 8 0.956348 266 8 0.958389 271 8 0.973801 153 8 0.971421 207 8 0.947852 228 8 0.941779 0.8831392 0.882887 0.9811457 0.830212 0.943160 0.8969247 0.970829 0.8691817 0.9016781 0.931682 0.817413 0.9538499 0.895781 0.921373 0.9227810 0.9192145 0.9242740 0.933555 0.945669 0.888492 0.7800077 0.937848 0.874245 0.963197 0.9482420 0.8191845 0.921426 0.954762 0.9495659 0.9341862 0.920293 0.88461245 0.7391003 0.8317732 0.8474320 0.842550 0.9704175 0.9528134 0.9600886 0.969110 0.9667431 0.951753 6 0.9213737 0.934604 -0.01310389 8 0.736586 0.864385 -0.1277987 0.68149736 3.7383e-03 weaklyHypometh 1.00000 0.62305707 insignificant 0.682250 0.0475043 weaklyHypometh 1 1.00000 insignificant 0.01702083 0.5722704 insignificant 1 insignificant 0.9219986 0.9032508 0.01955295 8 0.920733 0.8656248 0.05510823 3.7451e-03 1.1157e-01 weaklyHypermeth 3.3740e-02 1.0000000 weaklyHypermeth 5.2102e-01 8.7501e-02 insignificant 1.0000e+00 1.000000 insignificant 0.0662662 1.3969e-01 insignificant 1.0000e+00 insignificant 0.921999 0.9600000 -3.8545e-02 8 0.920733 0.961607 -0.04087377 9.9995e-01 9.3923e-05 weaklyHypometh 1.0000e+00 0.0234807 weaklyHypometh 9.9994e-01 0.00010297 weaklyHypometh 1.00000000 0.10297 insignificant -0.0599800 1.3459e-03 weaklyHypometh 0.149539 insignificant 0.935206 0.9032508 0.0325828 8 0.924231 0.8656248 0.058607 3.0048e-02 0.8706828 weaklyHypermeth 2.2258e-01 1.00000 insignificant 4.7965e-01 0.5072681 insignificant 1.0000e+00 1.00000 insignificant 0.0492453 2.9348e-01 insignificant 1.0000e+00 insignificant 0.935206 0.9600000 -0.0268822 8 0.924231 0.961607 -0.0373754 9.9648e-01 2.2879e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant 9.8443e-01 7.9222e-03 weaklyHypometh 1.00000000 0.792216 insignificant -0.0770009 0.0112434 weaklyHypometh 0.69610 insignificant 0.9032508 0.9600000 -0.06151760 8 0.8656248 0.961607 -0.09598200 9.9331e-01 2.0162e-02 weaklyHypometh 1.000000 1.8623e-01 insignificant 0.94570785 1.1064e-01 insignificant 1.00000 1.0000e+00 insignificant -0.12624621 1.7736e-02 weaklyHypometh 0.291591 insignificant chr2 10489603 10490603 5374 HPCAL1 ENSG00000115756 0.515988 720 22 0.539457 963 21 0.657812 610 24 0.414452 487 24 0.710250 346 20 0.211085 1325 25 0.3087151 690 23 0.383314 538 20 0.4717891 482 20 0.334401 643 25 0.417782 926 24 0.625110 239 15 0.2407852 578 23 0.411136 393 20 0.321628 818 24 0.4413703 198 18 0.262019 108 4 0.471990 878 25 0.4105561 1092 24 0.375770 1107 25 0.333430 463 23 0.435492 234 11 0.498804 545 18 0.66023 324 19 0.654297 127 12 0.778270 1015 22 0.290100 763 22 0.2922139 352 22 0.380889 1000 22 0.639021 1050 20 0.249858 1277 25 0.867634 937 24 0.2535050 688 20 0.2091014 886 24 0.289381 490 20 0.2415584 130 6 0.2322391 612 22 0.1952502 1367 25 0.440392 855 21 0.673246 831 23 0.697452 441 23 0.540628 683 23 0.471077 510 21 0.492966 0.6380447 0.697055 0.3466085 0.698626 0.145113 0.3249589 0.376079 0.5357787 0.3244494 0.418296 0.667551 0.2172714 0.413719 0.395386 0.4747867 NA 0.4402464 0.450249 0.403010 0.439071 0.4796345 0.560659 0.813796 0.772661 0.7727140 0.3482642 0.280480 0.390218 0.6680060 0.2428129 0.859171 0.20654916 0.1656418 0.2282361 0.1709652 0.221933 0.1396873 0.3635672 0.7019421 0.754814 0.5130731 0.361482 14 0.4586856 0.586540 -0.11454149 23 0.396467 0.457391 -0.0609239 0.99614807 1.9577e-06 weaklyHypometh 1.00000 0.00097884 weaklyHypometh 0.999769 0.0018927 weaklyHypometh 1 0.37853 insignificant -0.08041610 0.2484282 insignificant 1 insignificant 0.4587715 0.2484412 0.24702352 23 0.396019 0.2411887 0.15483024 8.2079e-20 1.0000e+00 hypermethylated 3.2832e-18 1.0000000 hypermethylated 1.6176e-15 1.0000e+00 hypermethylated 2.3109e-13 1.000000 hypermethylated 0.1894311 6.9097e-06 weaklyHypermeth 3.6367e-04 weaklyHypermeth 0.458889 0.5957190 -1.2792e-01 23 0.420908 0.513156 -0.09224769 9.9996e-01 1.3893e-06 weaklyHypometh 1.0000e+00 0.0013893 weaklyHypometh 1.0000e+00 0.00105887 weaklyHypometh 1.00000000 0.21177 insignificant -0.1382887 5.5254e-02 insignificant 0.936501 insignificant 0.586493 0.2484412 0.3690644 22 0.444912 0.2478884 0.197024 3.3822e-21 0.9999995 hypermethylated 2.2548e-19 1.00000 hypermethylated 1.0913e-16 1.0000000 hypermethylated 2.8689e-14 1.00000 hypermethylated 0.2698472 8.8250e-04 hypermethylated 2.6743e-02 hypermethylated 0.586639 0.5958987 -0.0171855 23 0.457624 0.527818 -0.0701939 9.8686e-01 8.7665e-02 insignificant 1.0000e+00 1.00000000 insignificant 9.7265e-01 3.6033e-01 insignificant 1.00000000 1.000000 insignificant -0.0578726 0.4793885 insignificant 1.00000 insignificant 0.2485008 0.5960205 -0.38859280 22 0.2478884 0.540934 -0.29304545 1.0000e+00 4.5038e-23 hypomethylated 1.000000 7.5063e-21 hypomethylated 1.00000000 6.7988e-15 hypomethylated 1.00000 3.3994e-12 hypomethylated -0.32771986 2.3932e-03 weaklyHypometh 0.087606 weaklyHypometh chr2 10591203 10592203 5379 ENSG00000217258 0.950265 315 5 0.889381 162 5 0.797421 63 4 0.973556 242 5 0.826667 50 5 0.971933 324 5 0.8044900 94 5 0.784615 81 5 0.9840000 63 2 0.959333 52 2 0.952892 210 5 0.311111 21 2 0.8409091 58 2 0.714286 40 2 0.805628 51 2 0.6000000 29 2 NA 0 0 0.677599 377 5 0.9229829 204 5 0.802750 297 5 0.960000 52 5 1.000000 19 2 0.756709 158 5 0.86190 72 2 0.981818 26 2 0.788060 164 5 0.976190 100 5 0.5833333 17 2 0.976037 154 5 0.927403 177 5 0.948853 229 5 0.898210 222 5 0.4774725 173 5 0.2464286 128 5 0.251882 403 5 NA 0 0 0.6454883 120 5 0.9338266 204 5 0.978326 273 5 0.827577 285 5 0.897530 339 5 0.886894 183 2 0.606769 214 5 0.947733 0.8235596 0.949312 0.9747645 0.909657 0.968996 0.9374414 0.857177 0.9663551 0.9122430 0.911399 0.668744 0.9458369 1.000000 0.901100 0.9065421 NA 0.9080952 0.944062 0.866207 0.990654 1.0000000 0.909927 0.896529 0.960068 0.9049471 0.9933244 0.929907 0.948275 0.9407664 0.9327863 0.951641 0.77223477 0.4656765 0.5405683 NA 0.871867 0.9617178 0.9532021 0.9273772 0.958126 0.9480720 0.931773 2 0.9231614 0.931655 -0.00942890 5 0.798336 0.796312 0.0020241 0.86331506 3.1838e-01 insignificant 1.00000 1.00000000 insignificant 0.879722 0.1026473 insignificant 1 1.00000 insignificant -0.06874584 0.1958640 lowCoverage 1 lowCoverage 0.9281481 0.6050584 0.25146141 5 0.904594 0.4747858 0.42980808 4.8606e-16 1.0000e+00 hypermethylated 1.5189e-14 1.0000000 hypermethylated 4.8783e-05 9.9951e-01 hypermethylated 1.2196e-03 1.000000 hypermethylated 0.3084445 7.4216e-02 lowCoverage 8.6298e-01 lowCoverage 0.923161 0.9435858 -1.2267e-02 5 0.798336 0.633386 0.16495021 1.9631e-01 6.3451e-01 insignificant 1.0000e+00 1.0000000 insignificant 3.9760e-01 0.46204622 insignificant 1.00000000 1.00000 insignificant -0.0199551 7.9319e-01 lowCoverage 1.000000 lowCoverage 0.935460 0.6050584 0.3224975 5 0.934837 0.4747858 0.460051 2.9577e-14 1.0000000 hypermethylated 9.2429e-13 1.00000 hypermethylated 1.3510e-05 0.9999972 hypermethylated 3.9736e-04 1.00000 hypermethylated 0.3771904 4.1052e-02 lowCoverage 5.4868e-01 lowCoverage 0.931655 0.9435858 0.0093437 5 0.796312 0.633386 0.1629261 1.4480e-02 7.7827e-01 weaklyHypermeth 3.5316e-01 1.00000000 insignificant 1.6324e-01 9.6609e-01 insignificant 1.00000000 1.000000 insignificant 0.0487908 0.5225009 lowCoverage 1.00000 lowCoverage 0.6050584 0.9450464 -0.28095285 5 0.4747858 0.886740 -0.41195472 1.0000e+00 4.6624e-06 hypomethylated 1.000000 1.1955e-04 hypomethylated 0.99997835 4.8246e-04 hypomethylated 1.00000 1.3785e-02 hypomethylated -0.32839959 6.4231e-02 lowCoverage 0.728185 lowCoverage chr2 11378303 11379303 5394 ENSG00000184521 0.615218 326 8 0.510516 121 7 0.600680 56 7 0.565789 138 7 0.535714 47 7 0.557143 115 5 0.6838135 124 7 0.681013 73 7 0.5259503 97 7 0.609977 101 7 0.607590 159 7 0.537698 52 7 0.6071429 79 7 0.563141 71 6 0.584372 108 7 0.4974490 40 4 0.334757 455 3 0.580281 333 11 0.7050505 109 7 0.712560 107 7 0.629630 29 2 0.683333 20 3 0.591044 123 7 0.72381 34 3 0.694286 42 7 0.659249 114 7 0.756944 40 5 0.6964286 37 4 0.546032 54 7 0.647710 108 4 0.655873 132 7 0.591166 143 7 0.6624160 99 7 0.6245899 75 7 0.590476 131 7 0.5000000 4 0 0.6094444 92 7 0.6461712 159 7 0.569529 331 7 0.622974 260 7 0.514246 298 7 0.670660 207 7 0.651743 258 7 0.587504 0.6238184 0.578998 0.5066070 0.506343 0.461940 0.4880698 0.639925 0.4190124 0.5851694 0.501866 0.482774 0.5257996 0.481367 0.522961 0.4539801 0.4481860 0.5934805 0.682308 0.681298 0.643035 0.7059998 0.508246 0.692537 0.659915 0.6152459 0.7052239 0.616240 0.475788 0.6003914 0.5954632 0.549314 0.59718064 0.5544178 0.5271144 0.6031244 0.531799 0.6113470 0.5363366 0.5913313 0.541618 0.5375984 0.565045 1 0.5566212 0.634703 -0.07679206 7 0.525423 0.658651 -0.1332278 0.96354816 1.2691e-04 weaklyHypometh 1.00000 0.04230236 weaklyHypometh 0.909745 0.0029623 weaklyHypometh 1 0.43621 insignificant -0.07549919 0.0065735 weaklyHypometh 1 insignificant 0.5593032 0.6482143 -0.04254144 7 0.577965 0.6373262 -0.05936067 9.4770e-01 2.2342e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant 7.1527e-01 1.7089e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0247234 4.2973e-01 insignificant 1.0000e+00 insignificant 0.554481 0.7540620 -5.5585e-02 7 0.496147 0.593900 -0.09775318 9.8883e-01 3.4243e-02 weaklyHypometh 1.0000e+00 0.8780153 insignificant 8.8469e-01 0.47290976 insignificant 1.00000000 1.00000 insignificant -0.0250375 4.8647e-01 insignificant 1.000000 insignificant 0.634593 0.6482143 0.0234604 7 0.657849 0.6373262 0.020523 4.3772e-01 0.7573723 insignificant 1.0000e+00 1.00000 insignificant 1.4687e-01 0.8873744 insignificant 1.0000e+00 1.00000 insignificant 0.0507758 1.1195e-01 insignificant 1.0000e+00 insignificant 0.633448 0.7540620 0.0151919 7 0.624516 0.593900 0.0306156 7.7460e-01 8.3595e-01 insignificant 1.0000e+00 1.00000000 insignificant 7.5518e-02 9.9588e-01 insignificant 1.00000000 1.000000 insignificant 0.0504617 0.1740488 insignificant 1.00000 insignificant 0.6475850 0.7546194 -0.01502169 7 0.5970291 0.659889 -0.06286037 1.5515e-01 4.9098e-01 insignificant 1.000000 1.0000e+00 insignificant 0.50312669 6.5836e-01 insignificant 1.00000 1.0000e+00 insignificant -0.00031405 9.9343e-01 insignificant 1.000000 insignificant chr2 20529403 20530403 5607 RHOB ENSG00000143878 0.913752 545 16 0.843437 182 12 0.793702 115 12 0.886635 483 18 0.645990 78 6 0.857208 500 19 0.7205782 97 7 0.864508 151 13 0.8377255 126 9 0.804854 149 15 0.874737 252 13 0.847976 81 6 0.6997533 180 13 NA 0 0 0.849423 120 9 0.8864469 56 9 0.818304 70 6 0.870791 401 16 0.8845645 189 15 0.829248 406 18 0.823641 90 8 0.776335 142 10 0.855527 279 18 0.63690 76 5 0.812346 89 7 0.788651 291 16 0.871932 145 12 0.6217320 60 5 0.849508 128 10 0.849414 275 18 0.859822 245 17 0.808357 567 18 0.6699823 165 12 0.7650354 176 11 0.736413 330 18 0.8155674 92 8 0.7899250 80 5 0.8007833 274 16 0.888773 400 16 0.903311 580 18 0.894713 435 16 0.912045 419 18 0.911793 489 16 0.907053 0.8550062 0.784121 0.8718223 0.774442 0.886512 0.8232804 0.792906 0.8488170 0.8125393 0.876025 0.837529 0.8458187 NA 0.886327 0.8194110 0.8938235 0.8248540 0.795243 0.819461 0.866092 0.8164000 0.866976 0.747365 0.821900 0.8192539 0.8769914 0.771269 0.881747 0.8647234 0.8505632 0.833635 0.70742212 0.7044463 0.7959040 0.8080006 0.829703 0.8083265 0.9039976 0.9171100 0.906106 0.8972466 0.876814 3 0.8615164 0.845702 0.01251950 14 0.855652 0.837658 0.0179942 0.19175832 9.2906e-01 insignificant 1.00000 1.00000000 insignificant 0.209139 0.8531862 insignificant 1 1.00000 insignificant 0.03169506 0.2855425 insignificant 1 insignificant 0.8615164 0.7806625 0.07825733 14 0.855652 0.7516215 0.10403040 1.5225e-08 9.9954e-01 weaklyHypermeth 2.8726e-07 1.0000000 weaklyHypermeth 4.8490e-03 9.8579e-01 weaklyHypermeth 7.2373e-02 1.000000 weaklyHypermeth 0.0649243 3.5382e-02 weaklyHypermeth 4.9142e-01 insignificant 0.861516 0.9139044 -3.9702e-02 15 0.855652 0.903031 -0.04737872 9.9989e-01 2.4058e-03 weaklyHypometh 1.0000e+00 0.2405819 insignificant 9.9965e-01 0.02772027 weaklyHypometh 1.00000000 1.00000 insignificant -0.0742517 2.3103e-04 weaklyHypometh 0.056451 weaklyHypometh 0.845702 0.7806625 0.0713403 16 0.837658 0.7516215 0.086036 5.3942e-05 0.9982882 weaklyHypermeth 7.5975e-04 1.00000 weaklyHypermeth 2.0084e-02 0.8306502 weaklyHypermeth 2.1596e-01 1.00000 insignificant 0.0332292 3.2280e-01 insignificant 1.0000e+00 insignificant 0.845702 0.9139044 -0.0499808 14 0.837658 0.903031 -0.0653730 9.9987e-01 1.3424e-03 weaklyHypometh 1.0000e+00 0.33453550 insignificant 9.9996e-01 4.4897e-03 weaklyHypometh 1.00000000 0.715979 insignificant -0.1059468 0.0010300 weaklyHypometh 0.27728 insignificant 0.7806625 0.9139044 -0.12183815 14 0.7516215 0.903031 -0.15140912 1.0000e+00 3.5537e-09 weaklyHypometh 1.000000 1.6923e-07 weaklyHypometh 0.99998384 5.4855e-06 weaklyHypometh 1.00000 4.5712e-04 weaklyHypometh -0.13917601 1.1316e-03 weaklyHypometh 0.064016 weaklyHypometh chr2 24821303 24822303 5698 ENSG00000206732 0.878434 200 6 0.814592 109 6 0.783890 94 6 0.906227 101 6 0.791667 25 3 0.869830 229 6 0.7711426 92 6 0.901852 67 6 0.7849003 63 6 0.758372 70 6 0.832338 113 6 0.700794 39 6 0.8706873 84 6 NA 0 0 0.858067 127 6 0.7854701 67 6 0.818452 64 6 0.903045 138 6 0.8653996 101 6 0.893791 236 6 0.763889 32 4 0.860140 72 6 0.862595 122 6 0.87222 36 6 0.854167 36 3 0.845810 107 6 0.850529 49 6 0.9095238 42 5 0.763993 78 6 0.822003 84 6 0.800635 94 6 0.876877 215 6 0.7208851 86 6 0.6013107 109 6 0.796356 108 6 0.8596380 59 6 0.8690476 47 6 0.7970475 119 6 0.892535 226 6 0.907051 236 6 0.947368 115 6 0.894814 232 6 0.890609 182 6 0.882778 0.8144333 0.788281 0.9038527 0.800296 0.869471 0.7754248 0.905786 0.7946189 0.7657048 0.832067 0.703860 0.8747869 NA 0.859861 0.7922091 0.8205833 0.9069028 0.867511 0.892658 0.763807 0.8579468 0.861542 0.883235 0.844675 0.8480556 0.8535738 0.911750 0.769186 0.8278738 0.8044125 0.875594 0.71933396 0.5918739 0.7918043 0.8630461 0.868872 0.8020040 0.8973664 0.9081688 0.951728 0.8982319 0.892971 5 0.8479445 0.843847 0.00190931 6 0.848942 0.846566 0.0023756 0.48983930 6.1484e-01 insignificant 1.00000 1.00000000 insignificant 0.568051 0.3167347 insignificant 1 1.00000 insignificant -0.00920130 0.6243891 insignificant 1 insignificant 0.8479445 0.7518939 0.09118127 6 0.848942 0.7652897 0.08365213 1.0101e-04 9.9999e-01 weaklyHypermeth 1.2318e-03 1.0000000 weaklyHypermeth 2.0365e-02 9.9796e-01 weaklyHypermeth 2.2882e-01 1.000000 insignificant 0.0569498 2.3253e-01 insignificant 1.0000e+00 insignificant 0.847945 0.9061554 -5.4097e-02 6 0.848942 0.901698 -0.05275625 9.9953e-01 2.2087e-03 weaklyHypometh 1.0000e+00 0.2405819 insignificant 9.9995e-01 0.00069451 weaklyHypometh 1.00000000 0.21177 insignificant -0.0754783 3.6792e-04 weaklyHypometh 0.061320 weaklyHypometh 0.843847 0.7518939 0.0875660 6 0.846566 0.7652897 0.081277 2.2262e-03 0.9995448 weaklyHypermeth 2.2262e-02 1.00000 weaklyHypermeth 4.6624e-02 0.9913819 weaklyHypermeth 4.6162e-01 1.00000 insignificant 0.0661511 1.7325e-01 insignificant 1.0000e+00 insignificant 0.843847 0.9061554 -0.0580427 6 0.846566 0.901698 -0.0551319 9.9774e-01 1.4315e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant 9.8466e-01 1.9979e-02 weaklyHypometh 1.00000000 1.000000 insignificant -0.0662770 0.0014609 weaklyHypometh 0.27728 insignificant 0.7518939 0.9061554 -0.14881898 6 0.7652897 0.901698 -0.13640838 1.0000e+00 3.1538e-06 weaklyHypometh 1.000000 8.2994e-05 weaklyHypometh 0.99999814 3.9954e-05 weaklyHypometh 1.00000 2.1029e-03 weaklyHypometh -0.13242806 2.1716e-02 weaklyHypometh 0.329053 insignificant chr2 25004403 25005403 5703 ADCY3 ENSG00000138031 0.742075 115 5 0.609113 163 6 0.682886 152 6 0.811042 84 5 0.817029 91 5 0.539588 169 8 0.6515552 112 5 0.763755 151 6 0.7872711 112 6 0.579371 96 6 0.548125 241 6 0.741595 48 6 0.6806041 147 6 0.575541 38 3 0.671068 100 6 0.4957875 56 5 0.431319 40 3 0.646833 72 6 0.6909691 148 6 0.647436 107 5 0.669753 79 6 0.834286 36 5 0.811458 86 6 0.80670 66 4 0.925893 66 4 0.744586 190 8 0.821716 96 6 0.5692641 32 3 0.750640 124 6 0.740926 177 6 0.800596 155 6 0.601953 160 6 0.7208904 141 6 0.5677678 143 5 0.870376 245 5 0.7091837 37 4 0.5176074 77 6 0.7474417 193 8 0.733598 130 4 0.902235 132 8 0.818142 130 6 0.852454 152 5 0.768464 116 5 0.762367 0.6189086 0.688699 0.7229427 0.822615 0.690329 0.6950733 0.748642 0.7631978 0.7824135 0.718125 0.776042 0.6922447 0.572013 0.656000 0.6709535 0.4535335 0.6463194 0.766616 0.620593 0.876085 0.8569595 0.741942 0.835861 0.849795 0.7532263 0.8197184 0.482639 0.819854 0.6988254 0.7232246 0.687674 0.74994623 0.5206022 0.7668154 0.6155897 0.669705 0.7656702 0.7525670 0.8229680 0.732448 0.7845093 0.803063 5 0.7128801 0.780681 -0.05868642 6 0.704068 0.729698 -0.0256300 0.97237180 4.7484e-02 weaklyHypometh 1.00000 1.00000000 insignificant 0.999365 0.0134419 weaklyHypometh 1 1.00000 insignificant -0.10083275 0.0131350 weaklyHypometh 1 insignificant 0.7133929 0.7033493 0.02027619 6 0.728729 0.6864979 0.04223100 2.4930e-01 2.2880e-01 insignificant 1.0000e+00 1.0000000 insignificant 3.9574e-01 2.4507e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0332297 5.7985e-01 insignificant 1.0000e+00 insignificant 0.712880 0.7742424 -5.7115e-02 5 0.704068 0.877058 -0.17299006 9.9812e-01 3.3448e-03 weaklyHypometh 1.0000e+00 0.3040766 insignificant 9.9994e-01 0.00396078 weaklyHypometh 1.00000000 0.36007 insignificant -0.1593304 1.9650e-03 weaklyHypometh 0.163748 insignificant 0.780681 0.7041916 0.0866992 6 0.729698 0.7489068 -0.019209 7.0488e-03 0.6326789 weaklyHypermeth 6.1832e-02 1.00000 weaklyHypermeth 1.1003e-01 0.8088175 insignificant 8.6429e-01 1.00000 insignificant 0.0676030 2.9060e-01 insignificant 1.0000e+00 insignificant 0.780681 0.7742424 0.0086491 5 0.729698 0.877058 -0.1473601 8.3929e-01 4.5631e-02 inconclusive 1.0000e+00 1.00000000 insignificant 9.5209e-01 2.3903e-01 insignificant 1.00000000 1.000000 insignificant -0.0584976 0.1882643 insignificant 1.00000 insignificant 0.7041916 0.7742424 -0.08217578 5 0.7489068 0.877058 -0.12815115 9.9959e-01 1.9474e-02 weaklyHypometh 1.000000 1.8424e-01 insignificant 0.99976192 7.3005e-02 insignificant 1.00000 7.6047e-01 insignificant -0.12610062 7.0359e-02 insignificant 0.756548 insignificant chr2 25299303 25300303 5706 POMC ENSG00000115138 0.921007 248 8 0.828771 125 7 0.802885 55 5 0.925936 303 8 0.937500 9 0 0.897495 294 8 0.8492063 19 2 0.931250 81 6 0.8690476 45 5 0.843750 52 5 0.895411 244 8 1.000000 20 0 0.9194444 80 6 1.000000 2 0 0.857639 52 6 0.3333333 8 0 0.700000 27 4 0.918168 303 8 0.9395833 88 7 0.878409 266 8 0.896259 38 5 0.898340 103 8 0.924651 99 8 0.95986 73 7 0.966667 77 5 0.883636 126 7 0.939701 84 7 0.9444444 9 0 0.912500 48 4 0.881723 166 7 0.888244 142 8 0.864733 390 8 0.8500000 75 7 0.8404762 87 6 0.841176 39 3 0.8571429 9 0 0.9304029 50 6 0.8146100 108 7 0.918099 108 7 0.948270 260 8 0.903400 179 8 0.903314 110 8 0.928635 229 8 0.909039 0.7133578 0.697650 0.9355324 0.921352 0.879652 0.7992894 0.988542 0.7500000 0.9218750 0.858252 1.000000 0.8650833 NA 0.898727 0.7615606 0.6354167 0.8653228 0.873264 0.854911 0.848586 0.9287465 0.924808 0.967361 0.945833 0.8876136 0.9247951 0.987128 0.854167 0.8447601 0.9134177 0.829393 0.75694444 0.8092262 0.8349762 0.6847294 0.860577 0.7790244 0.9386938 0.9321379 0.878630 0.8959912 0.910975 0 0.9168103 0.915129 0.00402138 8 0.894053 0.889417 0.0046360 0.38604050 8.0479e-01 insignificant 1.00000 1.00000000 insignificant 0.757827 0.3702845 insignificant 1 1.00000 insignificant -0.05095502 0.1381722 insignificant 1 insignificant 0.9168103 0.8641304 0.05028409 7 0.894053 0.8513389 0.04271429 5.0388e-04 9.9209e-01 weaklyHypermeth 5.6616e-03 1.0000000 weaklyHypermeth 2.0315e-01 8.8331e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0068071 8.4977e-01 lowCoverage 1.0000e+00 lowCoverage 0.916810 0.9390519 -1.8128e-02 8 0.894053 0.922367 -0.02831340 8.7454e-01 1.9183e-01 insignificant 1.0000e+00 1.0000000 insignificant 6.3874e-01 0.44728652 insignificant 1.00000000 1.00000 insignificant -0.0579019 9.2052e-02 insignificant 1.000000 insignificant 0.915129 0.8641304 0.0490043 7 0.889417 0.8513389 0.038078 3.7878e-03 0.9103810 weaklyHypermeth 3.5072e-02 1.00000 weaklyHypermeth 6.9703e-02 0.8856955 insignificant 6.3948e-01 1.00000 insignificant 0.0577621 1.3547e-02 lowCoverage 2.5086e-01 lowCoverage 0.915129 0.9390519 -0.0225670 8 0.889417 0.922367 -0.0329494 9.7715e-01 9.8953e-02 insignificant 1.0000e+00 1.00000000 insignificant 7.9116e-01 6.8332e-01 insignificant 1.00000000 1.000000 insignificant -0.0069469 0.5965038 insignificant 1.00000 insignificant 0.8641304 0.9390519 -0.07046769 7 0.8513389 0.922367 -0.07102768 9.9928e-01 1.3677e-03 weaklyHypometh 1.000000 1.9263e-02 weaklyHypometh 0.94980186 1.0162e-01 insignificant 1.00000 9.6786e-01 insignificant -0.06470901 8.2941e-03 lowCoverage 0.176471 lowCoverage chr2 25775103 25776103 5714 ENSG00000201160 0.903027 304 5 0.851953 189 5 0.884120 156 5 0.945000 138 5 0.870000 61 4 0.911531 257 5 0.8968691 115 5 0.857319 161 5 0.8688312 139 5 0.887410 121 5 0.904445 189 5 0.896349 97 4 0.8998692 157 5 NA 0 0 0.906467 115 5 0.9004727 57 4 0.823188 63 4 0.934516 137 5 0.9412454 104 5 0.958439 285 5 0.954609 99 5 0.912393 83 4 0.912336 217 5 0.94112 113 5 0.805208 40 3 0.949603 154 5 0.904706 90 5 0.9621032 87 5 0.920641 144 5 0.934251 121 5 0.924695 107 5 0.916591 324 5 0.8114553 208 5 0.6521092 88 5 1.000000 47 3 0.7544643 30 4 0.8379167 94 5 0.7445193 207 5 0.925638 174 5 0.952393 225 5 0.911425 162 5 0.929994 228 5 0.932188 200 5 0.894241 0.8329459 0.874387 0.9502121 0.853455 0.915709 0.8811762 0.837275 0.8707635 0.8953145 0.911758 0.880799 0.8835110 NA 0.887350 0.8861620 0.8579710 0.9301144 0.940790 0.957698 0.974131 0.8935936 0.909374 0.924513 0.848556 0.9407841 0.9047629 0.948802 0.921569 0.9281823 0.9217942 0.920704 0.79449586 0.5669569 1.0000000 0.7120199 0.809038 0.7311627 0.9218562 0.9463752 0.936827 0.9137300 0.920437 4 0.8980668 0.926536 -0.02818391 5 0.900666 0.926338 -0.0256713 0.98970209 1.0274e-02 weaklyHypometh 1.00000 0.87598131 insignificant 0.991909 0.0339424 weaklyHypometh 1 1.00000 insignificant -0.02295738 0.1174798 lowCoverage 1 lowCoverage 0.8980668 0.7908012 0.11657295 5 0.900666 0.7763364 0.12432993 6.1125e-08 9.9991e-01 weaklyHypermeth 1.1319e-06 1.0000000 weaklyHypermeth 9.9262e-02 8.1052e-01 insignificant 8.5571e-01 1.000000 insignificant 0.0968200 9.9235e-02 lowCoverage 1.0000e+00 lowCoverage 0.898067 0.9241658 -3.0184e-02 5 0.900666 0.929860 -0.02919368 9.8238e-01 3.7393e-02 weaklyHypometh 1.0000e+00 0.9152907 insignificant 9.7807e-01 0.02519751 weaklyHypometh 1.00000000 1.00000 insignificant -0.0334301 4.7329e-03 lowCoverage 0.284665 lowCoverage 0.926536 0.7908012 0.1456124 5 0.926338 0.7763364 0.150001 6.9927e-08 0.9999731 weaklyHypermeth 1.5539e-06 1.00000 weaklyHypermeth 1.6229e-02 0.9772004 weaklyHypermeth 1.8235e-01 1.00000 insignificant 0.1197774 5.3793e-02 lowCoverage 7.0219e-01 lowCoverage 0.926536 0.9241658 -0.0026867 5 0.926338 0.929860 -0.0035224 7.7044e-01 3.7500e-01 insignificant 1.0000e+00 1.00000000 insignificant 8.5054e-01 4.1104e-01 insignificant 1.00000000 1.000000 insignificant -0.0104727 0.4475845 lowCoverage 1.00000 lowCoverage 0.7908012 0.9241658 -0.14671517 5 0.7763364 0.929860 -0.15352362 9.9991e-01 3.1865e-04 weaklyHypometh 1.000000 5.1395e-03 weaklyHypometh 0.96837754 8.3423e-02 insignificant 1.00000 8.4266e-01 insignificant -0.13025013 4.1257e-02 lowCoverage 0.509342 lowCoverage chr2 25896803 25897803 5716 ENSG00000187536 0.842251 118 5 0.612073 140 5 0.593737 73 4 0.743137 75 4 0.670468 64 5 0.819602 214 5 0.6536171 105 6 0.700299 138 6 0.7606838 82 5 0.788664 58 3 0.831408 216 6 0.906250 30 2 0.6932677 111 6 0.743056 38 3 0.749580 112 4 0.7357143 34 2 1.000000 19 2 0.558890 92 5 0.6867088 125 5 0.888125 154 5 0.695484 46 3 0.783333 32 2 0.734127 73 3 0.66220 57 5 0.817460 39 3 0.613980 189 6 0.660949 86 5 0.6388889 38 3 0.756189 90 5 0.846059 189 5 0.757684 185 5 0.694028 215 5 0.7576768 102 6 0.6163580 62 4 0.615853 183 7 0.6614286 46 3 0.7523602 93 5 0.7043050 164 6 0.729341 164 4 0.737328 127 4 0.779879 77 3 0.633473 68 2 0.765821 141 4 0.910633 0.7444617 0.803584 0.9310626 0.873713 0.913597 0.9110987 0.903792 0.8683900 0.8716186 0.894296 0.951220 0.8729171 0.921787 0.913969 0.8888964 0.9945874 0.8490765 0.932973 0.981007 0.846920 0.8780260 0.902149 0.926926 0.820438 0.9295623 0.8641161 0.968835 0.928659 0.9415178 0.8708742 0.923275 0.84400591 0.8116230 0.9396332 0.9127758 0.844944 0.8403099 0.9437200 0.9191329 0.903953 0.8066487 0.925959 2 0.8178178 0.857143 -0.01706900 5 0.670493 0.706004 -0.0355118 0.56525271 1.2999e-01 insignificant 1.00000 1.00000000 insignificant 0.600143 0.6831750 insignificant 1 1.00000 insignificant 0.02717788 0.4093319 lowCoverage 1 lowCoverage 0.8178178 0.7938462 0.02312453 5 0.670493 0.5752853 0.09520731 2.5506e-03 5.2890e-01 weaklyHypermeth 2.4291e-02 1.0000000 weaklyHypermeth 6.5130e-02 8.6456e-01 insignificant 6.0869e-01 1.000000 insignificant 0.0642131 9.3845e-02 lowCoverage 1.0000e+00 lowCoverage 0.820526 0.9202773 -2.8308e-02 4 0.718593 0.683989 0.03460460 8.6957e-01 1.8369e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 8.6792e-01 0.49223477 lowCoverage 1.00000000 1.00000 lowCoverage 0.0197082 5.8996e-01 lowCoverage 1.000000 lowCoverage 0.857143 0.7938462 0.0301463 5 0.706004 0.5752853 0.130719 1.4348e-01 0.9779091 insignificant 9.1387e-01 1.00000 insignificant 5.8053e-01 0.9263553 insignificant 1.0000e+00 1.00000 insignificant 0.0370352 2.9028e-01 lowCoverage 1.0000e+00 lowCoverage 0.857492 0.9202773 -0.0067225 4 0.663561 0.683989 -0.0204272 8.2001e-01 4.0569e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 9.6409e-01 4.7555e-01 lowCoverage 1.00000000 1.000000 lowCoverage -0.0074697 0.8263751 lowCoverage 1.00000 lowCoverage 0.7944359 0.9202773 -0.03218158 4 0.5448248 0.683989 -0.13916388 9.7979e-01 2.0013e-01 lowCoverage 1.000000 1.0000e+00 lowCoverage 0.95915008 5.4726e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage -0.04450490 2.5390e-01 lowCoverage 1.000000 lowCoverage chr2 26121003 26122003 5734 ENSG00000199872 0.770232 148 9 0.643158 100 8 0.655556 42 5 0.870370 88 6 0.832122 141 9 0.609428 95 7 0.8498377 83 5 0.699231 99 9 0.6617965 66 8 0.808611 54 7 0.685299 169 9 0.751263 65 5 0.8641432 112 9 0.871605 79 9 0.882212 113 9 0.7523810 38 3 0.777551 90 3 0.677038 178 10 0.8132867 69 6 0.601852 40 2 0.857143 14 0 0.925926 16 0 0.738889 84 5 0.88889 22 2 0.866184 76 4 0.789418 81 6 0.809524 29 2 0.9000000 11 0 0.674485 134 9 0.540404 65 6 0.749383 50 6 0.831650 68 6 0.6708384 129 9 0.6266407 91 8 0.719680 85 4 0.2222222 11 0 0.7055556 58 7 0.8026870 100 8 0.805957 106 9 0.628840 113 9 0.682222 90 5 0.750000 92 5 0.618519 104 9 0.782266 0.6265235 0.660088 0.8671053 0.789855 0.637694 0.8584352 0.790655 0.6628930 0.7710161 0.699975 0.729366 0.8637524 0.901170 0.889139 0.6835840 0.7945269 0.6738810 0.795547 0.649123 0.903579 0.9122807 0.753947 0.868421 0.899027 0.7725564 0.8021465 0.831967 0.710716 0.7111679 0.7690058 0.820375 0.69059668 0.6260773 0.7667269 0.2039474 0.726974 0.8255504 0.8355479 0.6500803 0.789291 0.7692669 0.630482 0 0.7741240 0.793846 -0.01859712 6 0.760052 0.729190 0.0308620 0.88241281 3.5279e-01 insignificant 1.00000 1.00000000 insignificant 0.992929 0.0231960 weaklyHypometh 1 1.00000 insignificant -0.04380904 0.2613767 lowCoverage 1 lowCoverage 0.7741761 0.7130802 0.05540713 8 0.762285 0.6944419 0.06784338 2.6955e-03 9.8815e-01 weaklyHypermeth 2.5429e-02 1.0000000 weaklyHypermeth 3.6757e-02 9.9910e-01 weaklyHypermeth 3.9088e-01 1.000000 insignificant 0.1292447 1.8892e-01 insignificant 1.0000e+00 insignificant 0.774315 0.7663366 5.2139e-02 7 0.766057 0.631933 0.13412335 6.3147e-03 9.4318e-01 weaklyHypermeth 1.9733e-01 1.0000000 insignificant 6.7528e-02 0.97007843 insignificant 1.00000000 1.00000 insignificant 0.0567411 2.1389e-01 insignificant 1.000000 insignificant 0.795981 0.7130802 0.0812018 6 0.780121 0.6944419 0.085679 1.3957e-02 0.9996102 weaklyHypermeth 1.1077e-01 1.00000 insignificant 8.7490e-04 0.9999956 weaklyHypermeth 1.7855e-02 1.00000 weaklyHypermeth 0.1730537 9.8481e-02 lowCoverage 9.6550e-01 lowCoverage 0.795981 0.7678571 0.0504447 4 0.780121 0.702148 0.0779724 4.0331e-02 9.0034e-01 lowCoverage 7.6925e-01 1.00000000 lowCoverage 8.2444e-03 9.9958e-01 lowCoverage 0.30534670 1.000000 lowCoverage 0.1005502 0.0607617 lowCoverage 1.00000 lowCoverage 0.7130802 0.7678571 -0.02774887 6 0.6944419 0.702148 -0.00770632 5.5425e-01 2.6551e-01 insignificant 1.000000 1.0000e+00 insignificant 0.92639553 1.9474e-01 insignificant 1.00000 1.0000e+00 insignificant -0.07250353 4.5415e-01 insignificant 1.000000 insignificant chr2 26164803 26165803 5740 ENSG00000199872 0.614633 114 7 0.673093 181 10 0.750833 63 6 0.730098 141 7 0.745275 49 4 0.789782 200 7 0.7120491 63 6 0.737500 95 8 0.7535665 64 6 0.830357 36 3 0.788835 185 10 0.736111 33 2 0.8244444 63 6 0.804524 46 4 0.604167 40 2 0.4333333 13 0 0.741477 50 2 0.785043 70 7 0.6125153 64 4 0.758810 117 6 0.765079 29 4 0.854167 21 1 0.830556 60 6 0.84646 46 4 0.563550 47 3 0.807993 154 10 0.651020 36 3 0.9285714 11 0 0.751667 83 6 0.813182 153 8 0.818973 124 8 0.667586 164 5 0.6124114 98 7 0.3353030 57 4 0.586765 77 6 0.6666667 26 1 0.6982143 71 5 0.8609731 122 8 0.776483 108 6 0.782840 146 7 0.693470 132 7 0.450000 44 5 0.797392 164 5 0.582716 0.6446695 0.624471 0.7299922 0.623036 0.664901 0.5019927 0.680556 0.6468168 0.7784307 0.715651 0.652655 0.7663139 0.662509 0.588624 0.3945209 0.8112481 0.7877696 0.711727 0.605367 0.757899 0.7463846 0.758862 0.758538 0.601949 0.6877750 0.7947846 0.788123 0.638889 0.7483930 0.7140202 0.682210 0.62339035 0.4569024 0.6414566 0.6269841 0.603647 0.7683788 0.6575168 0.6886206 0.661648 0.4283791 0.749160 0 0.7436202 0.798491 -0.03111865 5 0.752698 0.796656 -0.0439586 0.94028246 7.8552e-03 weaklyHypometh 1.00000 0.78551529 insignificant 0.997575 0.0122123 weaklyHypometh 1 1.00000 insignificant -0.05357850 0.1540525 lowCoverage 1 lowCoverage 0.7439241 0.7073171 0.05464369 5 0.775180 0.6162322 0.15894763 1.3881e-02 9.1695e-01 weaklyHypermeth 1.1195e-01 1.0000000 insignificant 9.8972e-03 9.5508e-01 weaklyHypermeth 1.3746e-01 1.000000 insignificant 0.0946001 2.4555e-01 insignificant 1.0000e+00 insignificant 0.743620 0.7811448 1.2565e-03 7 0.752698 0.792969 -0.04027165 9.0276e-01 3.2907e-01 insignificant 1.0000e+00 1.0000000 insignificant 8.3976e-01 0.50374097 insignificant 1.00000000 1.00000 insignificant 0.0212854 7.6865e-01 insignificant 1.000000 insignificant 0.798491 0.7088889 0.0841368 5 0.796656 0.6778554 0.118801 9.5671e-06 0.9601603 weaklyHypermeth 1.5186e-04 1.00000 weaklyHypermeth 1.1385e-04 0.9495961 weaklyHypermeth 2.8464e-03 1.00000 weaklyHypermeth 0.1481786 9.4165e-02 lowCoverage 9.6086e-01 lowCoverage 0.798491 0.7811448 0.0210082 5 0.796656 0.792969 0.0036870 3.1324e-01 9.0864e-01 insignificant 1.0000e+00 1.00000000 insignificant 2.0032e-01 9.7355e-01 insignificant 1.00000000 1.000000 insignificant 0.0748639 0.3370265 lowCoverage 1.00000 lowCoverage 0.7088889 0.7811448 -0.04971715 5 0.6778554 0.792969 -0.11511405 9.8173e-01 4.4632e-02 weaklyHypometh 1.000000 3.6584e-01 insignificant 0.97346473 8.7710e-02 insignificant 1.00000 8.6841e-01 insignificant -0.07331470 4.6379e-01 insignificant 1.000000 insignificant chr2 26437603 26438603 5751 GPR113 ENSG00000173567 0.750447 177 5 0.662747 82 5 0.598822 87 5 0.743254 54 5 0.664685 59 5 0.693602 155 5 0.7109957 65 5 0.750671 93 5 0.6528571 61 5 0.647273 55 5 0.715137 119 5 0.584444 48 5 0.7956841 99 5 NA 0 0 0.742308 71 5 0.6571429 35 5 0.617778 48 5 0.682143 85 5 0.7142174 100 5 0.669848 164 5 0.717857 35 5 0.607937 48 5 0.629240 124 5 0.67084 46 5 0.766667 12 0 0.690086 115 5 0.772857 33 5 0.6866667 38 5 0.634223 100 5 0.708531 119 5 0.729386 104 5 0.659089 176 5 0.6733333 83 5 0.5608392 69 5 0.575886 90 5 0.6773333 79 5 0.5818182 57 5 0.6894439 101 5 0.752563 158 5 0.783333 122 5 0.755789 107 5 0.745488 112 5 0.746753 150 5 0.751285 0.6638518 0.599208 0.7443069 0.665716 0.695343 0.7118802 0.752087 0.6544508 0.6492769 0.716319 0.586806 0.7968450 NA 0.743062 0.6574675 0.6199495 0.6839489 0.715583 0.671250 0.719460 0.6092172 0.630618 0.672004 0.767992 0.6911054 0.7741477 0.688447 0.635105 0.7101870 0.7306245 0.660497 0.67518939 0.5622691 0.5776271 0.6787121 0.583678 0.6912084 0.7538579 0.7844353 0.756950 0.7463796 0.747928 5 0.6885938 0.677895 0.01512441 5 0.695699 0.679882 0.0158167 0.28744519 9.1874e-01 insignificant 1.00000 1.00000000 insignificant 0.510092 0.7472881 insignificant 1 1.00000 insignificant -0.00239300 0.9050510 lowCoverage 1 lowCoverage 0.6885938 0.6283925 0.06361752 5 0.695699 0.6278925 0.06780624 3.1477e-03 9.7856e-01 weaklyHypermeth 2.8878e-02 1.0000000 weaklyHypermeth 9.3731e-03 9.9577e-01 weaklyHypermeth 1.3390e-01 1.000000 insignificant 0.0606133 5.7917e-02 lowCoverage 7.0630e-01 lowCoverage 0.688594 0.6902928 -5.1321e-02 5 0.695699 0.752468 -0.05676911 9.7528e-01 1.3007e-02 weaklyHypometh 1.0000e+00 0.4485089 insignificant 9.6848e-01 0.00744937 weaklyHypometh 1.00000000 0.46559 insignificant -0.0697299 9.1748e-05 lowCoverage 0.033630 lowCoverage 0.677895 0.6283925 0.0493911 5 0.679882 0.6278925 0.051990 4.6262e-02 0.8188178 weaklyHypermeth 3.3044e-01 1.00000 insignificant 7.2293e-02 0.9384854 insignificant 6.5538e-01 1.00000 insignificant 0.0630063 5.4735e-02 lowCoverage 7.0219e-01 lowCoverage 0.677895 0.6902928 -0.0681919 5 0.679882 0.752468 -0.0725858 9.7820e-01 2.9238e-04 weaklyHypometh 1.0000e+00 0.09745988 weaklyHypometh 9.4559e-01 4.6652e-03 weaklyHypometh 1.00000000 0.715979 insignificant -0.0673369 0.0011492 lowCoverage 0.27728 lowCoverage 0.6283925 0.6902928 -0.11793262 5 0.6278925 0.752468 -0.12457536 9.9950e-01 1.4543e-05 weaklyHypometh 1.000000 3.3053e-04 weaklyHypometh 0.99844988 1.0264e-04 weaklyHypometh 1.00000 4.4628e-03 weaklyHypometh -0.13034316 2.2920e-03 weaklyHypometh 0.087606 weaklyHypometh chr2 26800403 26801403 5761 KCNK3 ENSG00000171303 0.725153 119 5 0.692632 233 6 0.716633 172 6 0.803638 155 5 0.880194 77 6 0.921884 223 5 0.8770934 154 6 0.945192 138 4 0.8847054 150 6 0.846184 141 6 0.885630 198 6 0.810784 63 5 0.9009331 221 6 0.870690 93 3 0.903135 164 5 0.7407407 67 6 0.725000 39 4 0.671412 166 5 0.9209322 170 6 0.804463 190 6 0.946759 78 6 0.645963 66 3 0.911254 139 4 0.88250 99 4 0.731818 32 3 0.816567 213 6 0.688384 98 5 0.7732872 72 3 0.879462 134 5 0.914886 243 6 0.908550 206 6 0.887410 174 6 0.1054610 236 6 0.0357298 101 6 0.690476 44 3 0.1583333 28 3 0.1948473 188 6 0.0528455 191 6 0.940291 129 5 0.860589 143 5 0.958974 126 5 0.989177 143 5 0.687414 121 5 0.881542 0.7438720 0.791300 0.8529223 0.807350 0.913261 0.8585618 0.900269 0.8411289 0.8362019 0.840716 0.773856 0.9176875 0.866439 0.860999 0.5734031 0.6513688 0.7465539 0.887819 0.863223 0.920827 0.8416288 0.899867 0.840395 0.845954 0.8659935 0.6787147 0.872049 0.850367 0.9144140 0.9078005 0.878218 0.16373152 0.0493543 0.5786141 0.1757764 0.289890 0.0873100 0.8961356 0.8745889 0.927982 0.9761591 0.796158 3 0.8424284 0.869369 -0.02761646 4 0.846919 0.865488 -0.0185685 0.91179574 1.9970e-01 lowCoverage 1.00000 1.00000000 lowCoverage 0.925767 0.0656870 lowCoverage 1 1.00000 lowCoverage -0.00588528 0.8666308 lowCoverage 1 lowCoverage 0.8424284 0.1789340 0.66063868 6 0.846919 0.1350601 0.71185914 7.3906e-48 1.0000e+00 hypermethylated 1.8476e-45 1.0000000 hypermethylated 7.9965e-12 1.0000e+00 hypermethylated 7.9965e-10 1.000000 hypermethylated 0.6200692 1.3308e-03 weaklyHypermeth 4.1588e-02 weaklyHypermeth 0.842428 0.8972810 -5.8671e-02 5 0.846919 0.852876 -0.00595708 5.0035e-01 2.5977e-02 weaklyHypometh 1.0000e+00 0.7020727 insignificant 9.9337e-01 0.00085849 weaklyHypometh 1.00000000 0.21177 insignificant -0.0609378 3.3825e-01 insignificant 1.000000 insignificant 0.869369 0.1789340 0.6704349 4 0.865488 0.1350601 0.730428 1.5471e-39 1.0000000 lowCoverage 2.5786e-37 1.00000 lowCoverage 6.6716e-10 1.0000000 lowCoverage 6.6716e-08 1.00000 lowCoverage 0.6259545 1.0453e-03 lowCoverage 3.0745e-02 lowCoverage 0.869369 0.8972810 -0.0242661 3 0.865488 0.852876 0.0126114 6.8370e-01 1.1895e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 9.8399e-01 9.0631e-02 lowCoverage 1.00000000 1.000000 lowCoverage -0.0550525 0.4028474 lowCoverage 1.00000 lowCoverage 0.1789340 0.8972810 -0.71334319 5 0.1350601 0.852876 -0.71781622 1.0000e+00 2.0058e-25 hypomethylated 1.000000 5.0145e-23 hypomethylated 1.00000000 5.0503e-07 hypomethylated 1.00000 5.6115e-05 hypomethylated -0.68100701 4.0804e-04 hypomethylated 0.034003 hypomethylated chr2 27331503 27332503 5792 CAD ENSG00000084774 0.823579 191 6 0.678001 148 7 0.663671 125 7 0.847765 236 4 0.844558 80 7 0.869775 214 6 0.7115598 125 7 0.663036 107 7 0.7230930 142 7 0.881902 105 7 0.869893 232 7 0.640393 142 7 0.6015164 161 7 NA 0 0 0.756706 105 5 0.5911565 41 6 0.677611 99 7 0.791276 183 4 0.6820981 98 7 0.750038 198 6 0.661032 81 6 0.559018 93 4 0.816516 206 7 0.89000 124 7 0.490079 71 4 0.852711 168 7 0.689198 139 7 0.8985723 76 7 0.764891 71 4 0.691896 169 7 0.650146 163 7 0.891468 257 7 0.3594137 137 7 0.1750164 153 7 0.429091 176 5 0.1144713 80 4 0.3285809 77 7 0.2332799 215 7 0.658730 208 6 0.539206 237 7 0.350304 169 6 0.253060 215 4 0.755431 204 4 0.764090 0.6838369 0.625213 0.7588511 0.822864 0.850873 0.6681278 0.559048 0.7427503 0.8618624 0.873163 0.492230 0.5805236 NA 0.771310 0.6417085 0.5871295 0.7099042 0.691723 0.706670 0.706489 0.4284177 0.817370 0.826576 0.654329 0.8319665 0.7273312 0.879389 0.766498 0.7127205 0.6767514 0.882822 0.33948302 0.0868434 0.2991905 0.1329953 0.265664 0.1587815 0.5448672 0.5040532 0.341198 0.2685811 0.634547 4 0.7144949 0.759580 -0.04759058 7 0.766846 0.762703 0.0041433 0.95762989 4.5780e-02 weaklyHypometh 1.00000 1.00000000 insignificant 0.921393 0.1785725 insignificant 1 1.00000 insignificant 0.00244053 0.9572909 insignificant 1 insignificant 0.7143903 0.2649165 0.47283822 7 0.733538 0.2798094 0.45372879 3.2530e-34 1.0000e+00 hypermethylated 2.7108e-32 1.0000000 hypermethylated 1.0163e-13 1.0000e+00 hypermethylated 1.2703e-11 1.000000 hypermethylated 0.4670926 4.6567e-05 hypermethylated 1.8627e-03 hypermethylated 0.714390 0.4172314 2.4650e-01 5 0.733538 0.531920 0.20161790 5.0361e-10 9.9999e-01 hypermethylated 1.2590e-07 1.0000000 hypermethylated 1.5513e-06 0.99993468 hypermethylated 0.00051708 1.00000 hypermethylated 0.2290552 6.9032e-02 insignificant 1.000000 insignificant 0.759752 0.2649165 0.5255370 7 0.776422 0.2798094 0.496613 3.6660e-25 1.0000000 hypermethylated 3.6660e-23 1.00000 hypermethylated 2.0133e-10 1.0000000 hypermethylated 2.2370e-08 1.00000 hypermethylated 0.4646521 1.0649e-05 hypermethylated 7.0990e-04 hypermethylated 0.759752 0.4172314 0.2953930 5 0.776422 0.531920 0.2445017 2.8315e-09 1.0000e+00 hypermethylated 1.4157e-06 1.00000000 hypermethylated 7.2443e-07 1.0000e+00 hypermethylated 0.00036221 1.000000 hypermethylated 0.2266147 0.0710368 insignificant 1.00000 insignificant 0.2649165 0.4172314 -0.25639812 5 0.2798094 0.531920 -0.25211089 9.9999e-01 8.3417e-07 hypomethylated 1.000000 2.4534e-05 hypomethylated 0.99669341 1.2593e-03 weaklyHypometh 1.00000 2.7984e-02 weaklyHypometh -0.23803738 6.3921e-02 insignificant 0.728185 insignificant chr2 27789903 27790903 5807 SUPT7L ENSG00000119760 0.842550 250 6 0.687138 203 7 0.669414 74 7 0.758865 191 7 0.677381 70 5 0.742603 198 7 0.7034014 87 7 0.724097 119 7 0.6761905 54 6 0.552381 44 4 0.703762 198 7 0.875000 14 0 0.7717029 124 7 0.856013 75 4 0.681746 88 7 0.3988095 39 3 0.666667 6 0 0.692383 269 7 0.7511815 130 6 0.825793 176 7 0.493506 35 4 0.770833 13 0 0.671847 105 7 0.86978 63 6 0.772857 120 4 0.794624 167 7 0.843349 70 4 0.7129252 29 4 0.658534 208 6 0.856774 147 7 0.781004 199 7 0.680310 179 7 0.6751701 127 7 0.7217922 112 7 0.576067 95 7 1.0000000 7 0 0.7363327 92 7 0.7056072 216 7 0.804119 239 7 0.778746 221 7 0.760029 228 7 0.647899 317 4 0.768800 199 7 0.869172 0.7333629 0.772507 0.8851195 0.777037 0.837870 0.7888713 0.772534 0.8038272 0.6902058 0.810752 0.812868 0.7789978 0.831668 0.758313 0.4219136 0.7827622 0.8256310 0.788373 0.859519 0.726692 0.7699855 0.716811 0.879516 0.827581 0.8830916 0.8407357 0.734933 0.755546 0.8573556 0.8417977 0.780823 0.78429792 0.7682783 0.5608947 0.9698298 0.864350 0.7626248 0.8987613 0.8505510 0.834993 0.8552505 0.860430 3 0.7804068 0.781791 -0.00149746 7 0.732137 0.744021 -0.0118833 0.63176072 1.8314e-01 insignificant 1.00000 1.00000000 insignificant 0.928341 0.0611147 insignificant 1 1.00000 insignificant -0.02934149 0.4581825 insignificant 1 insignificant 0.7804068 0.7211094 0.04639855 7 0.732137 0.6906691 0.04146823 3.1546e-02 9.8630e-01 weaklyHypermeth 2.3542e-01 1.0000000 insignificant 4.6450e-01 8.2812e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0229742 7.2444e-01 insignificant 1.0000e+00 insignificant 0.780407 0.8446844 -5.1326e-02 7 0.732137 0.773644 -0.04150631 9.7139e-01 3.2563e-02 weaklyHypometh 1.0000e+00 0.8569274 insignificant 9.7213e-01 0.00835015 weaklyHypometh 1.00000000 0.49119 insignificant -0.0390647 3.0186e-01 insignificant 1.000000 insignificant 0.781791 0.7211094 0.0485339 7 0.744021 0.6906691 0.053351 5.8201e-04 0.9507269 weaklyHypermeth 6.9287e-03 1.00000 weaklyHypermeth 7.6263e-02 0.8480791 insignificant 6.7831e-01 1.00000 insignificant 0.0063673 9.2486e-01 insignificant 1.0000e+00 insignificant 0.781791 0.8446844 -0.0495112 7 0.744021 0.773644 -0.0296230 9.0356e-01 7.4566e-02 insignificant 1.0000e+00 1.00000000 insignificant 7.6414e-01 1.1313e-01 insignificant 1.00000000 1.000000 insignificant -0.0097232 0.8156922 insignificant 1.00000 insignificant 0.7211094 0.8446844 -0.09366837 7 0.6906691 0.773644 -0.08297453 9.9434e-01 7.5246e-05 weaklyHypometh 1.000000 1.4197e-03 weaklyHypometh 0.98920426 6.8283e-02 insignificant 1.00000 7.3423e-01 insignificant -0.01609046 8.0805e-01 insignificant 1.000000 insignificant chr2 28417903 28418903 5849 ENSG00000197918 0.682878 285 6 0.548677 270 9 0.575556 79 9 0.664122 201 6 0.779798 78 9 0.719051 316 6 0.5536963 153 9 0.561646 134 9 0.6384615 61 5 0.660000 43 4 0.588394 265 9 0.666667 21 0 0.6191460 60 5 0.726046 59 5 0.789167 70 6 0.2500000 19 0 0.071023 98 3 0.612197 200 7 0.7490707 93 6 0.689768 258 9 0.662771 67 6 0.729167 26 3 0.777138 167 9 0.66885 59 4 0.584053 134 8 0.578540 242 9 0.529183 91 8 0.5406926 45 4 0.724345 77 2 0.648813 239 9 0.648540 228 9 0.653312 253 9 0.2926547 191 6 0.4748546 112 9 0.462626 163 7 0.5580247 118 8 0.3009580 204 9 0.3541698 242 9 0.588242 293 8 0.562103 206 6 0.638641 211 6 0.661565 58 1 0.627587 220 9 0.609532 0.5474646 0.494494 0.5631674 0.778464 0.669819 0.6014339 0.551514 0.5914761 0.6630631 0.533109 0.584260 0.6926017 0.714448 0.694219 0.2274775 0.5335484 0.6500759 0.675583 0.577944 0.593522 0.7070495 0.741131 0.540598 0.587776 0.6389210 0.5809392 0.504462 0.652465 0.6177853 0.6050860 0.659621 0.17781008 0.2690213 0.5705128 0.3479479 0.353732 0.1999703 0.5760069 0.5737583 0.544801 0.6391838 0.594724 1 0.7307275 0.792870 -0.02117270 6 0.555974 0.631646 -0.0756720 0.93103101 4.5272e-02 weaklyHypometh 1.00000 1.00000000 insignificant 0.338372 0.2932217 insignificant 1 1.00000 insignificant -0.03818183 0.3950198 insignificant 1 insignificant 0.7307275 0.3974733 0.36917897 6 0.555974 0.3406195 0.21535469 5.4363e-15 1.0000e+00 hypermethylated 1.5532e-13 1.0000000 hypermethylated 5.2357e-06 1.0000e+00 hypermethylated 1.5399e-04 1.000000 hypermethylated 0.2000535 4.2077e-03 weaklyHypermeth 9.0640e-02 weaklyHypermeth 0.730727 0.7226721 2.5567e-02 6 0.555974 0.627646 -0.07167196 5.3427e-01 9.6770e-01 insignificant 1.0000e+00 1.0000000 insignificant 6.1253e-01 0.97957123 insignificant 1.00000000 1.00000 insignificant -0.0083595 8.4500e-01 insignificant 1.000000 insignificant 0.792998 0.3970874 0.3962501 9 0.659981 0.3144180 0.345563 1.2463e-11 1.0000000 hypermethylated 3.1956e-10 1.00000 hypermethylated 4.4733e-05 1.0000000 hypermethylated 1.2426e-03 1.00000 hypermethylated 0.2382353 1.4439e-03 weaklyHypermeth 3.9024e-02 weaklyHypermeth 0.792870 0.7226721 0.0471081 6 0.631646 0.627646 0.0040001 6.8442e-02 9.7676e-01 insignificant 1.0000e+00 1.00000000 insignificant 3.4608e-01 9.0724e-01 insignificant 1.00000000 1.000000 insignificant 0.0298224 0.3117161 insignificant 1.00000 insignificant 0.3974733 0.7226721 -0.35657160 6 0.3406195 0.627646 -0.28702665 1.0000e+00 1.8075e-04 hypomethylated 1.000000 3.1164e-03 hypomethylated 0.99999899 2.1647e-02 weaklyHypometh 1.00000 2.8113e-01 insignificant -0.20841296 3.6555e-03 weaklyHypometh 0.110773 insignificant chr2 28418303 28419303 5850 ENSG00000197918 0.654052 151 4 0.607718 111 5 0.512000 85 5 0.663906 173 4 0.819444 33 4 0.796082 165 4 0.5714286 34 2 0.799678 116 5 0.7452266 92 4 0.704072 67 4 0.750391 167 5 0.563889 31 3 0.5488087 168 4 0.741558 74 4 0.691820 115 4 0.2590909 37 3 0.466667 10 0 0.344761 183 4 0.6966947 74 4 0.661712 154 5 0.498942 43 5 0.447133 105 5 0.742735 96 5 0.66794 105 4 0.756373 67 5 0.628434 110 5 0.493336 102 5 0.7166667 48 4 0.778440 94 4 0.574497 183 5 0.607854 98 5 0.856212 132 5 0.1210145 170 4 0.1750000 72 5 0.450000 8 1 0.1600000 27 5 0.1087090 158 5 0.1880111 158 5 0.533048 157 5 0.442477 129 4 0.384481 179 4 0.271942 196 4 0.535000 90 5 0.576144 0.5695663 0.563252 0.6143737 0.768293 0.755996 0.3966318 0.758533 0.6976027 0.6617739 0.744483 0.468835 0.4520578 0.699557 0.650270 0.3375831 0.6010090 0.3777788 0.631455 0.605671 0.526055 0.3453636 0.692933 0.683733 0.739000 0.5618718 0.5578219 0.728997 0.752051 0.5110322 0.7106698 0.825343 0.04512784 0.0355691 0.3016886 0.0325203 0.060976 0.0711152 0.5050844 0.3520346 0.281354 0.3050701 0.444350 3 0.6142157 0.650042 -0.02688742 4 0.623741 0.559280 0.0644609 0.73689684 4.7805e-01 lowCoverage 1.00000 1.00000000 lowCoverage 0.692469 0.3970529 lowCoverage 1 1.00000 lowCoverage -0.01743034 0.7290485 lowCoverage 1 lowCoverage 0.6142157 0.0843170 0.54524271 4 0.623741 0.1345501 0.48919109 1.1356e-29 9.9999e-01 lowCoverage 7.5704e-28 1.0000000 lowCoverage 9.0898e-11 1.0000e+00 lowCoverage 8.2635e-09 1.000000 lowCoverage 0.4294943 4.4582e-05 lowCoverage 1.8576e-03 lowCoverage 0.614328 0.3834887 2.3172e-01 4 0.648489 0.448191 0.20029840 6.9174e-09 9.8314e-01 lowCoverage 1.3835e-06 1.0000000 lowCoverage 1.6807e-05 0.99893112 lowCoverage 0.00420172 1.00000 lowCoverage 0.1965605 1.0662e-02 lowCoverage 0.371713 lowCoverage 0.650042 0.0843170 0.5572982 5 0.559280 0.1345501 0.424730 1.5752e-22 1.0000000 hypermethylated 1.1252e-20 1.00000 hypermethylated 9.5024e-09 1.0000000 hypermethylated 8.6385e-07 1.00000 hypermethylated 0.4469246 3.0676e-05 lowCoverage 1.6693e-03 lowCoverage 0.652248 0.3834887 0.2608780 4 0.671136 0.448191 0.2229453 4.3655e-07 9.8881e-01 lowCoverage 6.2364e-05 1.00000000 lowCoverage 2.4263e-05 9.8127e-01 lowCoverage 0.00606579 1.000000 lowCoverage 0.2139908 0.0073863 lowCoverage 0.52759 lowCoverage 0.0847458 0.3834887 -0.31568177 4 0.1614601 0.448191 -0.28673090 1.0000e+00 5.3700e-12 lowCoverage 1.000000 3.1588e-10 lowCoverage 0.99999994 7.5744e-06 lowCoverage 1.00000 5.8265e-04 lowCoverage -0.23293380 9.8155e-03 lowCoverage 0.200316 lowCoverage chr2 28512803 28513803 5859 FOSL2 ENSG00000075426 0.832501 342 8 0.811638 226 8 0.863290 247 8 0.919453 334 8 0.866066 156 8 0.800888 448 8 0.8279985 224 8 0.719839 273 8 0.6701973 276 8 0.691600 252 6 0.873134 425 8 0.618792 218 8 0.7316922 287 8 0.924387 175 8 0.683457 270 8 0.6460589 181 7 0.895067 102 5 0.887555 454 8 0.8197919 357 8 0.858448 405 8 0.775833 103 8 0.661253 179 6 0.772844 171 8 0.77134 189 8 0.858317 140 8 0.821242 386 8 0.838579 196 8 0.8254131 200 8 0.881363 330 8 0.899765 368 8 0.899584 319 8 0.890744 394 8 0.8293968 229 8 0.7587795 234 8 0.837662 59 5 0.8162879 34 3 0.6712819 241 8 0.7280145 434 8 0.712203 341 8 0.861280 295 8 0.812151 376 8 0.904743 342 8 0.913872 282 8 0.927221 0.8159787 0.867815 0.9239773 0.894778 0.881859 0.8469152 0.817781 0.8423557 0.8671287 0.887380 0.844589 0.9172568 0.941717 0.858490 0.7809026 0.8578019 0.8975974 0.951001 0.869845 0.884101 0.7258141 0.841459 0.865822 0.871625 0.9273640 0.8411664 0.807247 0.900434 0.9067861 0.8874366 0.904595 0.81913385 0.8739203 0.9756636 0.8389182 0.862272 0.7428908 0.9108948 0.8627866 0.842782 0.9138239 0.918431 8 0.8805732 0.878992 -0.00220635 8 0.683037 0.770284 -0.0872477 0.79728725 1.7097e-01 insignificant 1.00000 1.00000000 insignificant 0.866122 0.3003932 insignificant 1 1.00000 insignificant -0.02759760 0.3592225 insignificant 1 insignificant 0.8805732 0.8107230 0.05891728 8 0.683037 0.5810207 0.10201608 2.0008e-03 7.3226e-01 weaklyHypermeth 1.9496e-02 1.0000000 weaklyHypermeth 7.5178e-01 2.6672e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0235221 5.0799e-01 insignificant 1.0000e+00 insignificant 0.882270 0.9028117 -1.6360e-02 8 0.743007 0.704089 0.03891815 8.4661e-01 2.3217e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.3006e-01 0.35115463 insignificant 1.00000000 1.00000 insignificant -0.0437572 3.3942e-01 insignificant 1.000000 insignificant 0.878992 0.8107230 0.0669008 8 0.770284 0.5810207 0.189264 2.8101e-03 0.9531264 weaklyHypermeth 2.7282e-02 1.00000 weaklyHypermeth 5.8286e-01 0.3561871 insignificant 1.0000e+00 1.00000 insignificant 0.0511197 1.5918e-01 insignificant 1.0000e+00 insignificant 0.879502 0.9028117 -0.0115232 8 0.797313 0.704089 0.0932240 7.0458e-01 3.3975e-01 insignificant 1.0000e+00 1.00000000 insignificant 7.7374e-01 2.8422e-01 insignificant 1.00000000 1.000000 insignificant -0.0161596 0.7134036 insignificant 1.00000 insignificant 0.8113821 0.9028117 -0.07234269 8 0.6391228 0.704089 -0.06496620 9.7012e-01 8.0858e-02 insignificant 1.000000 6.1439e-01 insignificant 0.58431284 8.9608e-01 insignificant 1.00000 1.0000e+00 insignificant -0.06727933 1.8067e-01 insignificant 1.000000 insignificant chr2 28643003 28644003 5865 PLB1 ENSG00000163803 0.092807 989 23 0.071209 1127 22 0.092158 739 23 0.047010 650 22 0.085807 660 22 0.077871 1992 23 0.0067638 777 22 0.086283 744 22 0.0029751 703 22 0.018369 605 22 0.076887 883 23 0.058217 567 22 0.0042865 520 22 0.031370 385 17 0.048909 788 22 0.0018116 408 17 0.075630 5622 11 0.031619 841 22 0.0082122 487 22 0.049296 1818 22 0.049170 375 22 0.064296 393 12 0.063758 581 23 0.09162 513 22 0.135686 259 12 0.051737 1060 22 0.075754 915 23 0.0481747 390 22 0.089269 529 22 0.119977 1020 22 0.020292 974 22 0.050240 1410 22 0.0014205 656 22 0.0043912 555 22 0.088797 840 22 0.0037879 160 8 0.0673218 575 22 0.0469565 899 22 0.069890 2079 23 0.010659 1434 21 0.030763 1005 20 0.044137 729 20 0.049628 1325 22 0.010909 0.0096732 0.023374 0.0046012 0.010197 0.012063 0.0086466 0.011414 0.0021638 0.0051482 0.011830 0.012146 0.0069217 0.019186 0.011808 0.0041734 0.0042847 0.0056879 0.011830 0.015960 0.018582 0.0100383 0.024490 0.024882 0.011847 0.0096483 0.0096248 0.022786 0.010155 0.0071806 0.0064779 0.010328 0.00088348 0.0063142 0.0350861 0.0101786 0.023232 0.0048465 0.0040706 0.0029642 0.001793 0.0019582 0.012165 17 0.0090632 0.015099 -0.00397684 22 0.097157 0.093577 0.0035799 0.99529224 2.8692e-01 insignificant 1.00000 1.00000000 insignificant 0.996959 0.6992844 insignificant 1 1.00000 insignificant -0.02328994 0.0646016 insignificant 1 insignificant 0.0090179 0.0111262 -0.00016211 22 0.086240 0.0570461 0.02919359 3.7257e-01 9.8485e-01 insignificant 1.0000e+00 1.0000000 insignificant 2.0561e-01 9.7652e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0129289 4.7245e-01 insignificant 1.0000e+00 insignificant 0.008465 0.0062395 3.2632e-03 22 0.038708 0.028032 0.01067664 3.2366e-01 9.6828e-01 insignificant 1.0000e+00 1.0000000 insignificant 3.9552e-01 0.99244028 insignificant 1.00000000 1.00000 insignificant 0.0073591 5.6487e-01 insignificant 1.000000 insignificant 0.014874 0.0111262 0.0041904 22 0.076452 0.0570461 0.019406 1.4505e-01 0.9979584 insignificant 9.1801e-01 1.00000 insignificant 1.5371e-01 0.9997457 insignificant 1.0000e+00 1.00000 insignificant 0.0362188 7.6477e-02 insignificant 8.5929e-01 insignificant 0.014422 0.0063907 0.0075144 22 0.075626 0.066910 0.0087156 1.3656e-01 1.0000e+00 insignificant 1.0000e+00 1.00000000 insignificant 3.1750e-01 1.0000e+00 insignificant 1.00000000 1.000000 insignificant 0.0306490 0.0459297 weaklyHypermeth 1.00000 insignificant 0.0103401 0.0062395 0.00437967 22 0.0415537 0.028032 0.01352222 9.7458e-01 7.9507e-01 insignificant 1.000000 1.0000e+00 insignificant 0.99091904 9.8864e-01 insignificant 1.00000 1.0000e+00 insignificant -0.00556979 7.6830e-01 insignificant 1.000000 insignificant chr2 28760103 28761103 5883 ENSG00000222232 0.873399 120 5 0.798701 125 8 0.785371 94 8 0.947917 30 1 0.924634 70 5 0.739462 147 8 0.9677083 75 8 0.840053 89 8 0.9002976 70 5 0.958302 76 5 0.897105 204 8 0.619318 36 5 0.8995726 62 5 1.000000 6 0 0.897760 70 5 0.3458333 38 5 0.578571 38 5 0.644097 47 5 0.8601016 135 8 0.836782 139 5 0.912946 62 7 0.803846 37 2 0.847689 120 8 0.84306 33 3 0.836607 38 4 0.855423 96 8 0.906983 66 5 0.8781250 61 5 0.943750 32 2 0.811430 136 8 0.944767 143 8 0.847152 154 5 0.8996626 124 8 0.9682540 110 8 0.800000 25 3 0.7406294 129 8 0.9031177 115 8 0.9500000 144 7 0.894631 104 8 0.764623 144 8 0.818452 74 8 0.591219 116 5 0.780281 114 8 0.894626 0.7876042 0.698115 0.9043928 0.893915 0.702594 0.9289406 0.814927 0.8338870 0.9360417 0.911159 0.577214 0.8893033 0.800008 0.901503 0.1746770 0.6365892 0.7937123 0.890039 0.839101 0.873339 0.8017708 0.760797 0.771250 0.906146 0.8458851 0.8916432 0.918605 0.891473 0.7689208 0.9550390 0.938205 0.90277961 0.9640704 0.9313257 0.7521700 0.931136 0.9437984 0.8584029 0.8095244 0.772979 0.3939690 0.774937 1 0.8264512 0.870143 -0.04251282 8 0.837122 0.871663 -0.0345409 0.98137366 9.0817e-02 insignificant 1.00000 1.00000000 insignificant 0.941206 0.1383655 insignificant 1 1.00000 insignificant -0.05356515 0.1775552 insignificant 1 insignificant 0.8264512 0.9041731 -0.06270966 8 0.837122 0.8826678 -0.04554575 8.9862e-01 7.3671e-03 weaklyHypometh 1.0000e+00 0.5262210 insignificant 9.4346e-01 1.1443e-03 weaklyHypometh 1.0000e+00 0.381443 insignificant -0.0611946 2.4866e-01 insignificant 1.0000e+00 insignificant 0.826451 0.7228261 1.0372e-01 8 0.837122 0.746062 0.09106020 7.1502e-03 9.9886e-01 weaklyHypermeth 2.1667e-01 1.0000000 insignificant 1.0314e-01 0.99406386 insignificant 1.00000000 1.00000 insignificant 0.0459081 4.7574e-01 insignificant 1.000000 insignificant 0.870143 0.9041731 -0.0206751 8 0.871663 0.8826678 -0.011005 3.6919e-01 0.0268627 weaklyHypometh 1.0000e+00 1.00000 insignificant 7.4377e-01 0.0284155 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.0076295 8.5002e-01 insignificant 1.0000e+00 insignificant 0.870143 0.7228261 0.1409314 8 0.871663 0.746062 0.1256011 1.4789e-04 9.9838e-01 weaklyHypermeth 1.0564e-02 1.00000000 weaklyHypermeth 1.1478e-02 9.9567e-01 weaklyHypermeth 0.40992807 1.000000 insignificant 0.0994732 0.1178987 insignificant 1.00000 insignificant 0.9041731 0.7228261 0.15641464 8 0.8826678 0.746062 0.13660595 1.1740e-03 9.9821e-01 weaklyHypermeth 0.167709 1.0000e+00 insignificant 0.00169042 9.9634e-01 weaklyHypermeth 0.28174 1.0000e+00 insignificant 0.10710266 1.2285e-01 insignificant 1.000000 insignificant chr2 29605303 29606303 5915 ENSG00000215990 0.827568 236 7 0.747186 394 7 0.544968 185 7 0.867781 195 7 0.904865 132 7 0.779985 350 7 0.9220561 170 7 0.890831 252 7 0.8525119 205 7 0.942675 164 7 0.907205 342 7 0.813250 85 6 0.7874980 234 7 0.716639 97 3 0.791050 237 7 0.9558824 79 6 0.785544 42 4 0.426593 259 4 0.8631980 297 7 0.825330 255 7 0.828634 79 6 0.726933 80 3 0.816984 155 7 0.86656 117 5 0.915391 45 3 0.769367 373 7 0.823152 119 6 0.9238665 140 6 0.756218 308 7 0.934787 373 7 0.912443 342 7 0.851940 249 7 0.0048553 309 7 0.0211552 180 6 0.000000 265 7 0.0000000 30 3 0.0168866 259 7 0.0142571 382 7 0.717023 296 7 0.804263 215 6 0.863280 212 6 0.551767 204 4 0.707694 222 4 0.837953 0.7856737 0.526847 0.8883785 0.894289 0.844620 0.8844916 0.866484 0.8453667 0.9449033 0.910863 0.825164 0.8387141 0.772312 0.808528 0.9189064 0.6686097 0.5061665 0.877495 0.859782 0.826733 0.7526789 0.809863 0.887191 0.900169 0.8478440 0.8088397 0.936753 0.821100 0.9465858 0.9120011 0.891765 0.01091578 0.0141272 0.0000000 0.0000000 0.017089 0.0200017 0.7535452 0.7607637 0.833276 0.5825949 0.728332 3 0.8242280 0.880672 -0.05817167 7 0.818238 0.850162 -0.0319243 0.95158110 2.2404e-02 weaklyHypometh 1.00000 0.93348871 insignificant 0.941214 0.0930128 insignificant 1 1.00000 insignificant -0.03622509 0.3116412 insignificant 1 insignificant 0.8242280 0.0126316 0.81037251 7 0.818238 0.0123542 0.80588382 1.5149e-77 1.0000e+00 hypermethylated 1.5149e-74 1.0000000 hypermethylated 1.0933e-19 1.0000e+00 hypermethylated 3.6442e-17 1.000000 hypermethylated 0.7981051 4.1740e-17 hypermethylated 1.3913e-14 hypermethylated 0.824228 0.7554395 8.1747e-02 7 0.818238 0.726061 0.09217724 5.5912e-04 9.8523e-01 weaklyHypermeth 2.9427e-02 1.0000000 weaklyHypermeth 1.1152e-03 0.99728035 weaklyHypermeth 0.08426948 1.00000 weaklyHypermeth 0.0788255 2.3370e-01 insignificant 1.000000 insignificant 0.880672 0.0126316 0.8674634 7 0.850162 0.0123542 0.837808 1.7458e-80 1.0000000 hypermethylated 1.7458e-77 1.00000 hypermethylated 1.1476e-16 1.0000000 hypermethylated 2.8689e-14 1.00000 hypermethylated 0.8343302 5.1760e-14 hypermethylated 2.5880e-11 hypermethylated 0.880672 0.7554395 0.1473551 7 0.850162 0.726061 0.1241015 4.0087e-07 9.9983e-01 weaklyHypermeth 6.2364e-05 1.00000000 weaklyHypermeth 1.3353e-04 9.9998e-01 weaklyHypermeth 0.01907596 1.000000 weaklyHypermeth 0.1150506 0.0949852 insignificant 1.00000 insignificant 0.0126316 0.7554395 -0.72517609 7 0.0123542 0.726061 -0.71370658 1.0000e+00 3.4096e-41 hypomethylated 1.000000 1.7048e-38 hypomethylated 1.00000000 1.2852e-11 hypomethylated 1.00000 3.2130e-09 hypomethylated -0.71927959 1.5939e-04 hypomethylated 0.015939 hypomethylated chr2 33129303 33130303 5984 LTBP1 ENSG00000049323 0.703582 174 6 0.600000 80 5 0.609428 42 5 0.670343 128 5 0.541667 34 2 0.775789 51 3 0.6175926 33 2 0.719658 57 5 0.5873016 29 2 0.675000 28 2 0.702000 110 5 0.200000 7 0 0.6990741 32 2 0.366667 17 2 0.977778 21 2 0.9000000 10 0 1.000000 2 0 0.461599 152 6 0.6798246 52 2 0.693918 52 5 0.800000 10 0 NA 0 0 0.544246 88 5 0.65476 34 2 0.677990 47 2 0.742500 88 5 0.861111 16 2 0.6111111 11 0 0.676157 50 4 0.639220 79 5 0.781410 57 5 0.717349 67 5 0.5192251 69 5 0.6349206 38 2 0.547619 36 5 0.8000000 11 0 0.4626068 34 2 0.4404040 90 5 0.606221 129 6 0.637265 112 5 0.656142 113 5 0.660714 99 2 0.675857 136 5 0.718386 0.6071429 0.522367 0.7497773 0.523810 0.779699 0.5944444 0.720391 0.6507937 0.7142857 0.695714 0.285714 0.7341270 0.485714 0.968254 0.9285714 0.8284577 0.5812015 0.808271 0.734169 0.857143 NA 0.667687 0.797619 0.682843 0.7660714 0.7619048 0.733584 0.723413 0.6570295 0.7902930 0.690058 0.58652882 0.7074830 0.6326531 0.7857143 0.483516 0.5073593 0.6487599 0.6927428 0.621414 0.6921769 0.700279 0 0.6949458 0.714808 -0.02174679 5 0.695056 0.578089 0.1169674 0.97096995 4.4659e-01 insignificant 1.00000 1.00000000 insignificant 0.935967 0.2264269 insignificant 1 1.00000 insignificant -0.04147135 0.4140274 lowCoverage 1 lowCoverage 0.6927928 0.5683453 0.12315220 5 0.552199 0.4561482 0.09605074 2.1191e-04 9.9717e-01 weaklyHypermeth 2.4641e-03 1.0000000 weaklyHypermeth 7.6359e-02 9.1407e-01 insignificant 6.8178e-01 1.000000 insignificant 0.0915985 2.0683e-01 lowCoverage 1.0000e+00 lowCoverage 0.694670 0.7164686 6.9446e-03 5 0.644232 0.643543 0.00068863 3.6432e-01 5.1990e-01 insignificant 1.0000e+00 1.0000000 insignificant 4.0314e-01 0.89423341 insignificant 1.00000000 1.00000 insignificant 0.0118211 7.8808e-01 lowCoverage 1.000000 lowCoverage 0.716117 0.5703971 0.1449588 5 0.674437 0.5321729 0.142264 1.7479e-04 0.9981401 weaklyHypermeth 2.1579e-03 1.00000 weaklyHypermeth 4.2571e-03 0.9899214 weaklyHypermeth 6.3539e-02 1.00000 weaklyHypermeth 0.1330698 6.1909e-02 lowCoverage 7.5164e-01 lowCoverage 0.716117 0.7164686 0.0382532 5 0.674437 0.643543 0.0308934 1.3119e-01 7.3623e-01 insignificant 1.0000e+00 1.00000000 insignificant 5.2230e-02 9.2438e-01 insignificant 1.00000000 1.000000 insignificant 0.0532925 0.0997002 lowCoverage 1.00000 lowCoverage 0.5703971 0.7164686 -0.10416832 5 0.5321729 0.643543 -0.11137057 6.2520e-01 4.3757e-04 weaklyHypometh 1.000000 6.5308e-03 weaklyHypometh 0.36204117 2.6605e-02 weaklyHypometh 1.00000 3.2446e-01 insignificant -0.07977732 2.0592e-01 lowCoverage 1.000000 lowCoverage chr2 33219403 33220403 5990 LTBP1 ENSG00000049323 0.818694 132 7 0.772219 112 6 0.773214 60 5 0.839965 117 7 0.872985 64 5 0.842943 321 7 0.8480377 69 6 0.845035 127 5 0.8872378 53 4 0.729945 37 4 0.799261 233 7 0.952381 25 3 0.8444444 57 4 0.701465 36 4 0.785714 57 4 0.6666667 24 3 0.625000 5 0 0.823684 93 4 0.8511905 60 4 0.761276 168 7 0.699206 40 4 0.663221 55 4 0.739711 67 5 0.79473 68 6 0.475263 40 4 0.838682 137 7 0.772024 51 3 0.7507440 32 3 0.777950 49 4 0.795404 155 7 0.811212 122 7 0.852266 329 7 0.8259804 94 7 0.5333333 29 2 0.680690 131 6 0.6458333 12 0 0.8323645 77 7 0.6855761 129 7 0.857942 175 7 0.836598 239 7 0.829847 117 7 0.571429 20 1 0.825739 190 7 0.783920 0.6939776 0.742274 0.8302000 0.817808 0.778693 0.7969093 0.756515 0.8469430 0.7308265 0.756144 0.892361 0.8469329 0.856113 0.649306 0.5607639 0.6822917 0.7853344 0.774740 0.653912 0.752662 0.6765825 0.831568 0.682781 0.598350 0.7625842 0.6467882 0.754712 0.693388 0.7183121 0.7447157 0.833482 0.75577002 0.6427083 0.5079010 0.5842014 0.722959 0.7192267 0.7993421 0.7702564 0.799107 0.6703869 0.768342 2 0.7945946 0.797025 0.01320293 6 0.818297 0.809105 0.0091925 0.38365297 3.4431e-01 insignificant 1.00000 1.00000000 insignificant 0.141577 0.9161033 insignificant 1 1.00000 insignificant 0.05453328 0.1260448 lowCoverage 1 lowCoverage 0.7945946 0.7457627 0.06564651 6 0.818297 0.7414904 0.07680666 1.2100e-02 8.0999e-01 weaklyHypermeth 1.0083e-01 1.0000000 insignificant 6.2302e-02 9.2714e-01 insignificant 5.8776e-01 1.000000 insignificant 0.1014384 8.3366e-02 lowCoverage 9.4735e-01 lowCoverage 0.794595 0.8825911 -1.0992e-02 6 0.818297 0.830540 -0.01224338 9.5691e-02 7.6920e-02 insignificant 1.0000e+00 1.0000000 insignificant 1.6975e-01 0.52621872 insignificant 1.00000000 1.00000 insignificant 0.0177573 7.6540e-01 lowCoverage 1.000000 lowCoverage 0.797025 0.7457627 0.0539651 7 0.809105 0.7414904 0.067614 5.0504e-02 0.9057970 insignificant 3.5818e-01 1.00000 insignificant 4.0207e-01 0.8052654 insignificant 1.0000e+00 1.00000 insignificant 0.0469051 4.1468e-01 lowCoverage 1.0000e+00 lowCoverage 0.797025 0.8825911 -0.0244856 7 0.809105 0.830540 -0.0214358 4.6813e-02 3.1911e-02 weaklyHypometh 8.5114e-01 1.00000000 insignificant 1.0872e-01 9.8767e-02 insignificant 1.00000000 1.000000 insignificant -0.0367760 0.5668210 insignificant 1.00000 insignificant 0.7457627 0.8825911 -0.08106313 7 0.7414904 0.830540 -0.08905004 5.7047e-01 2.5832e-02 weaklyHypometh 1.000000 2.2660e-01 insignificant 0.59229540 6.0010e-02 insignificant 1.00000 6.5945e-01 insignificant -0.08368108 2.6969e-01 lowCoverage 1.000000 lowCoverage chr2 36676603 36677603 6046 ENSG00000179926 0.8650748 185 7 0.816021 210 8 0.6932769 115 8 0.7043087 156 3 0.707027 153 8 0.8083283 206 4 0.760524 188 8 0.756928 98 3 0.800000 80 7 0.7659722 110 7 0.797056 272 8 0.7831502 107 8 0.7718750 130 8 0.5848485 40 3 0.808882 158 8 0.6730929 112 6 0.9111111 147 5 0.811987 134 3 0.790177 135 8 0.7743007 154 4 0.8343516 78 5 1.0000000 7 1 0.7999319 89 5 0.8500000 32 2 0.740741 19 2 0.8337409 216 8 0.7883280 101 7 0.848214 34 3 0.8268468 90 6 0.8205279 200 7 0.8338879 219 8 0.8475000 157 3 0.8386364 136 8 0.8197459 194 8 0.722308 92 6 1.0000000 16 1 0.8118056 72 8 0.8174342 177 6 0.7975783 230 3 0.8431217 183 7 0.8018662 241 6 0.7560606 90 3 0.8755300 199 4 0.8682219 0.824286 0.6927024 0.7956361 0.698835 0.8034141 0.763746 0.7848753 0.7824257 0.7158966 0.796521 0.759566 0.7554455 0.8276939 0.808051 0.5991495 0.8259917 0.8430316 0.795935 0.7801738 0.8544919 0.9868514 0.8174444 0.8217822 0.8933420 0.82830750 0.8204433 0.857850 0.8227312 0.8254454 0.8438454 0.8196040 0.8513951 0.8253527 0.8354815 0.8568722 0.8448295 0.8563054 0.7889500 0.8473597 0.7895587 0.7511551 0.859010 1 0.8176471 0.8301127 -0.02560747 6 0.7971607 0.8185434 -0.02138268 9.8905e-01 4.5940e-02 weaklyHypometh 1.00000 1.000000 insignificant 0.9999975 3.8371e-05 weaklyHypometh 1.00000 0.015701 weaklyHypometh -0.06614215 0.0094904 lowCoverage 1.00000 lowCoverage 0.8176471 0.8398836 -0.03108560 8 0.7971607 0.7988814 -0.00172069 5.8433e-01 0.0072703 weaklyHypometh 1.0000e+00 1 insignificant 9.8486e-01 0.0008986 weaklyHypometh 1.0000e+00 0.8986 insignificant -0.0657914 1.4643e-01 insignificant 1.0000e+00 insignificant 0.8176471 0.7698834 -0.0108628 3 0.7971607 0.8182543 -0.0210936 7.5698e-01 1.5117e-02 lowCoverage 1.0000e+00 0.8398117 lowCoverage 9.9596e-01 3.5211e-03 lowCoverage 1.0000e+00 0.3494108 lowCoverage -0.04563432 1.1059e-01 lowCoverage 1.0000000 lowCoverage 0.8301127 0.8398836 -1.0237e-02 6 0.8185434 0.7988814 0.0196620 4.8432e-01 0.183332 insignificant 1.0000e+00 1 insignificant 4.0989e-01 0.51438 insignificant 1.0000e+00 1 insignificant 0.00035075 9.9339e-01 lowCoverage 1.0000e+00 lowCoverage 0.8301127 0.7698834 0.01568137 3 0.8185434 0.8182543 0.00028907 3.4029e-01 3.3035e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 1.6529e-01 0.5115121 lowCoverage 1.0000000 1 lowCoverage 0.02050783 0.4641141 lowCoverage 1.000000 lowCoverage 0.8398836 0.7698834 0.02311417 3 0.7988814 0.8182543 -0.0193729 7.2461e-02 3.4394e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage 0.22203180 4.6453e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.02015708 6.4686e-01 lowCoverage 1.000000 lowCoverage chr2 38174803 38175803 6102 CYP1B1 ENSG00000138061 0.6786477 141 9 0.671064 344 10 0.7226190 93 10 0.7160791 121 6 0.759586 145 12 0.8956316 108 10 0.668741 91 5 0.814379 218 10 0.713360 129 5 0.9227524 175 10 0.834914 315 10 0.5390152 55 4 0.8071846 270 11 0.8861607 54 3 0.807386 154 10 0.4750000 37 2 0.6071429 32 4 0.750758 125 5 0.803341 253 10 0.9189311 69 4 0.5947712 70 3 0.9500000 17 0 0.6930761 111 10 0.8446351 96 7 0.686090 119 5 0.7210147 325 10 0.7901432 90 9 0.747222 26 2 0.8505666 290 10 0.7372915 382 10 0.7785599 325 10 0.8420202 98 10 0.7275870 311 10 0.7633565 306 10 0.689984 239 11 0.6111111 20 0 0.6649306 133 10 0.6456683 361 10 0.8723485 85 8 0.8461085 141 10 0.8715729 77 6 0.9264264 89 2 0.8793333 85 7 0.8440336 0.718284 0.6766088 0.7831485 0.751827 0.8701802 0.745057 0.7940507 0.7957556 0.9180351 0.824705 0.617854 0.8470511 0.8943343 0.831791 0.5855856 0.6381911 0.8205706 0.854235 0.9163809 0.7571101 0.9549550 0.7346440 0.8680607 0.6595298 0.75299852 0.8439428 0.791794 0.8092221 0.8389983 0.8558272 0.8613295 0.7767960 0.7527406 0.7816184 0.6942316 0.7789039 0.7859389 0.8624761 0.9011407 0.8365898 0.9226165 0.884084 1 0.7910550 0.8322217 -0.03300655 10 0.7788244 0.7752063 0.00361817 9.7920e-01 8.5129e-02 insignificant 1.00000 1.000000 insignificant 0.9892583 4.1542e-01 insignificant 1.00000 1.000000 insignificant -0.01998119 0.6075250 insignificant 1.00000 insignificant 0.7909527 0.7591241 0.04170729 10 0.7470147 0.6438232 0.10319145 2.7731e-02 0.9961463 weaklyHypermeth 3.7988e-01 1 insignificant 4.5034e-02 0.9970211 weaklyHypermeth 7.6329e-01 1.0000 insignificant 0.0658617 7.7946e-02 insignificant 1.0000e+00 insignificant 0.7908407 0.8616352 -0.0718226 6 0.7472279 0.8753813 -0.1281534 9.9990e-01 1.4145e-05 weaklyHypometh 1.0000e+00 0.0070723 weaklyHypometh 9.9990e-01 1.2669e-04 weaklyHypometh 1.0000e+00 0.0422317 weaklyHypometh -0.12952325 2.7190e-04 weaklyHypometh 0.0271900 weaklyHypometh 0.8322182 0.7591241 7.5703e-02 10 0.7617923 0.6438232 0.1179691 1.5541e-05 0.999791 weaklyHypermeth 4.5708e-04 1 weaklyHypermeth 2.3322e-03 0.99902 weaklyHypermeth 7.5231e-02 1 weaklyHypermeth 0.08584287 2.8103e-02 weaklyHypermeth 9.2440e-01 insignificant 0.8323045 0.8616352 -0.05710984 6 0.7788071 0.8753813 -0.09657414 9.9999e-01 2.7374e-03 weaklyHypometh 1.0000e+00 0.5474793 insignificant 9.9984e-01 0.0073922 weaklyHypometh 1.0000000 1 insignificant -0.10954206 0.0026001 weaklyHypometh 0.200005 insignificant 0.7591241 0.8613445 -0.12367294 6 0.6438232 0.8657952 -0.2219720 1.0000e+00 1.3227e-06 weaklyHypometh 1.0000000 7.8010e-05 weaklyHypometh 0.99999994 5.5901e-05 weaklyHypometh 1.00000 4.6584e-03 weaklyHypometh -0.19538494 8.0627e-05 weaklyHypometh 0.013438 weaklyHypometh chr2 38590603 38591603 6122 ATL2 ENSG00000119787 0.8032880 70 7 0.513200 110 7 0.7196795 59 5 0.9155844 58 5 0.662326 71 7 0.7850794 163 7 0.679422 69 6 0.910019 73 6 0.796289 41 4 0.5804113 70 6 0.734284 179 7 0.7518007 46 4 0.7443229 84 6 0.7017094 43 5 0.789418 71 6 0.8148148 23 1 0.9111111 31 2 0.728999 52 6 0.839130 43 3 0.6989583 102 5 0.8571429 42 4 0.6296296 28 2 0.7813520 71 5 0.6331933 61 6 0.722222 14 1 0.8004188 82 6 0.7421703 70 6 0.746032 38 4 0.6376005 61 5 0.8242521 87 7 0.7477411 66 7 0.7679446 168 7 0.6659341 99 7 0.7766885 42 3 0.593137 58 4 0.7916667 15 1 0.6555250 47 5 0.7062343 85 7 0.9230442 50 5 0.8144078 70 6 0.8375000 37 3 0.8714286 22 3 0.8021978 49 4 0.8541859 0.794516 0.7939103 0.9523460 0.753458 0.8431900 0.746985 0.9448052 0.8707583 0.8700653 0.809793 0.850163 0.8087968 0.7601020 0.731183 0.8815053 0.8624635 0.7931073 0.893554 0.8517473 0.9112903 0.7301818 0.9200579 0.7109820 0.7140937 0.84964034 0.9004077 0.845878 0.7339757 0.8794458 0.8437000 0.8200769 0.6602047 0.7133144 0.7089548 0.8200261 0.7904014 0.7497928 0.9310196 0.8837538 0.9495968 0.9193548 0.880273 0 0.7853224 0.7766497 0.01248905 7 0.6292831 0.6427558 -0.01347270 4.8977e-01 6.7052e-01 insignificant 1.00000 1.000000 insignificant 0.8718288 4.8642e-01 insignificant 1.00000 1.000000 insignificant 0.01318407 0.6796535 insignificant 1.00000 insignificant 0.7853224 0.7023121 0.08081385 7 0.6292831 0.6865383 -0.05725519 6.4543e-04 0.4080409 weaklyHypermeth 1.3462e-02 1 weaklyHypermeth 1.8181e-01 0.7145801 insignificant 1.0000e+00 1.0000 insignificant 0.0557947 1.7650e-01 lowCoverage 1.0000e+00 lowCoverage 0.7878369 0.8508772 -0.0718759 5 0.6509730 0.7934495 -0.1424765 9.9804e-01 4.4574e-05 weaklyHypometh 1.0000e+00 0.0089147 weaklyHypometh 9.9904e-01 2.8038e-03 weaklyHypometh 1.0000e+00 0.3139477 insignificant -0.09572334 9.1367e-03 lowCoverage 0.4153055 lowCoverage 0.7766497 0.7023121 7.0880e-02 7 0.6427558 0.6865383 -0.0437825 4.2787e-02 0.984581 weaklyHypermeth 5.3484e-01 1 insignificant 3.2177e-01 0.98510 insignificant 1.0000e+00 1 insignificant 0.04261063 2.8587e-01 lowCoverage 1.0000e+00 lowCoverage 0.7767857 0.8508772 -0.07887497 5 0.6713069 0.7934495 -0.12214262 9.9998e-01 2.1052e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant 9.9998e-01 0.1043120 insignificant 1.0000000 1 insignificant -0.10890741 0.0041838 lowCoverage 0.261491 lowCoverage 0.6997085 0.8508772 -0.13970660 5 0.6238459 0.7934495 -0.1696036 9.9609e-01 1.7916e-04 weaklyHypometh 1.0000000 5.9721e-03 weaklyHypometh 0.99976711 3.9708e-03 weaklyHypometh 1.00000 1.2809e-01 insignificant -0.15151805 3.4657e-03 lowCoverage 0.230215 lowCoverage chr2 38725403 38726403 6131 HNRPLL ENSG00000143889 0.6554723 168 6 0.512529 147 6 0.5777348 103 3 0.7523864 112 5 0.545734 83 6 0.6266134 139 6 0.722049 127 5 0.813527 127 6 0.644974 104 5 0.4760257 86 3 0.758305 221 6 0.8510870 56 3 0.8846154 116 3 0.6785714 38 5 0.642144 117 5 0.6932957 52 3 0.9607843 29 2 0.749921 134 6 0.618065 117 6 0.6215909 120 5 0.7238095 46 2 0.5000000 6 0 0.5956197 103 5 0.8492310 75 5 0.763922 44 3 0.6724877 123 5 0.6456031 102 6 0.737821 57 3 0.7098306 105 6 0.7501400 149 6 0.6449493 89 6 0.5758619 181 5 0.6783175 155 6 0.4117494 96 5 0.704454 93 5 0.5000000 9 0 0.4182051 112 5 0.5631605 140 5 0.7368073 152 5 0.6189459 140 5 0.7127486 107 5 0.8470297 103 5 0.6418091 72 5 0.8369489 0.813957 0.8707671 0.8895295 0.758214 0.8175367 0.907486 0.9070122 0.7851622 0.8356700 0.910819 0.971975 0.9225195 0.6390289 0.877541 0.8401268 0.9297768 0.8271437 0.767277 0.8543725 0.8525362 0.8127025 0.9160744 0.9085783 0.7868037 0.86969176 0.8371803 0.867106 0.8365110 0.8973287 0.8604177 0.8302039 0.8050943 0.7980592 0.8007759 0.8586957 0.6562534 0.7753902 0.9052668 0.8750465 0.8358053 0.9117064 0.845880 1 0.7695811 0.8027778 -0.02552887 6 0.6681212 0.7149527 -0.04683149 9.7907e-01 1.3598e-01 insignificant 1.00000 1.000000 insignificant 0.9191129 3.9750e-01 insignificant 1.00000 1.000000 insignificant 0.00849828 0.8297266 lowCoverage 1.00000 lowCoverage 0.7695811 0.7090909 0.03529818 6 0.6681212 0.5203028 0.14781844 8.8389e-03 0.8771706 weaklyHypermeth 1.4981e-01 1 insignificant 2.5158e-02 0.9283767 weaklyHypermeth 5.4691e-01 1.0000 insignificant 0.1432902 3.9360e-02 lowCoverage 1.0000e+00 lowCoverage 0.7695811 0.7822300 -0.0358940 5 0.6681212 0.7864506 -0.1183294 9.7702e-01 6.7246e-02 insignificant 1.0000e+00 1.0000000 insignificant 9.3638e-01 3.2383e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.02219693 6.6202e-01 lowCoverage 1.0000000 lowCoverage 0.8027778 0.7090909 5.8840e-02 6 0.7149527 0.5203028 0.1946499 4.1658e-04 0.996392 weaklyHypermeth 9.2574e-03 1 weaklyHypermeth 2.0273e-02 0.99889 weaklyHypermeth 4.3135e-01 1 insignificant 0.13479190 4.9716e-02 lowCoverage 1.0000e+00 lowCoverage 0.8027778 0.7822300 -0.01206614 5 0.7149527 0.7864506 -0.07149786 9.1286e-01 4.0750e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.6616e-01 0.7789528 insignificant 1.0000000 1 insignificant -0.03069520 0.5465271 lowCoverage 1.000000 lowCoverage 0.7090909 0.7822300 -0.07241847 5 0.5203028 0.7864506 -0.2661478 9.9535e-01 1.5055e-02 weaklyHypometh 1.0000000 2.6412e-01 insignificant 0.99884632 7.6502e-02 insignificant 1.00000 1.0000e+00 insignificant -0.16548710 3.2469e-02 lowCoverage 0.901911 lowCoverage chr2 39215703 39216703 6145 ENSG00000202309 0.8026867 294 8 0.615649 198 8 0.6676077 110 8 0.8251093 110 8 0.774306 61 5 0.8290137 325 8 0.630973 136 8 0.718424 113 8 0.711453 89 8 0.7244593 89 8 0.719655 249 8 0.8395176 48 5 0.6797853 94 6 0.8258929 29 4 0.742970 122 8 0.5519814 51 5 0.8223605 75 5 0.800399 154 8 0.746969 154 8 0.7463742 267 8 0.6728395 66 7 0.8832442 61 5 0.7759934 135 8 0.7219612 70 7 0.825000 67 8 0.8038194 183 8 0.7993266 91 7 0.825000 34 3 0.7598443 112 7 0.7371725 215 8 0.6986526 163 8 0.7589065 296 8 0.6585526 165 8 0.5504956 130 8 0.671650 150 8 0.6764069 68 3 0.6922024 78 7 0.6999463 171 8 0.7991036 225 8 0.7609508 231 8 0.7588367 185 8 0.6924503 195 8 0.8155039 206 8 0.8283081 0.672548 0.7676406 0.8661935 0.857948 0.8096512 0.661425 0.7884989 0.7743503 0.7738219 0.784001 0.799205 0.7682649 0.8094706 0.823400 0.6763484 0.8259604 0.8214968 0.839666 0.8106932 0.8131051 0.8790923 0.8273775 0.8316956 0.9000000 0.87078291 0.8355686 0.790208 0.7634430 0.7986785 0.7844563 0.7764584 0.7158635 0.6467442 0.7486093 0.8033196 0.8407561 0.7761382 0.8466404 0.8247986 0.8138543 0.8172049 0.857191 3 0.7597543 0.7876758 -0.02458026 8 0.8339029 0.7944608 0.03944207 9.8459e-01 3.6730e-01 insignificant 1.00000 1.000000 insignificant 0.9971078 3.6812e-01 insignificant 1.00000 1.000000 insignificant -0.03303405 0.1935891 insignificant 1.00000 insignificant 0.7594937 0.7060367 0.05719371 8 0.7840738 0.6339007 0.15017304 3.2247e-03 0.9984515 weaklyHypermeth 5.8630e-02 1 weaklyHypermeth 2.5629e-01 0.9943233 insignificant 1.0000e+00 1.0000 insignificant 0.0805703 1.5515e-02 weaklyHypermeth 6.2059e-01 insignificant 0.7594067 0.7975048 -0.0393395 8 0.7600820 0.7963207 -0.0362387 9.9904e-01 2.9325e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant 9.9962e-01 2.8468e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant -0.02658974 3.5980e-01 insignificant 1.0000000 insignificant 0.7877770 0.7060367 8.5864e-02 8 0.7827991 0.6339007 0.1488984 4.3403e-04 0.998650 weaklyHypermeth 9.4354e-03 1 weaklyHypermeth 3.0846e-02 0.99856 weaklyHypermeth 6.1490e-01 1 insignificant 0.11360433 2.0225e-03 weaklyHypermeth 1.0323e-01 insignificant 0.7876344 0.7975048 -0.01659046 8 0.7586656 0.7963207 -0.03765501 9.4079e-01 2.8391e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.0441e-01 0.4323648 insignificant 1.0000000 1 insignificant 0.00644430 0.8186327 insignificant 1.000000 insignificant 0.7069645 0.7975048 -0.09717268 8 0.7043341 0.7963207 -0.0919865 9.9988e-01 1.7590e-03 weaklyHypometh 1.0000000 4.2903e-02 weaklyHypometh 0.99978791 3.3360e-02 weaklyHypometh 1.00000 6.8081e-01 insignificant -0.10716003 7.0519e-03 weaklyHypometh 0.282075 insignificant chr2 40411703 40412703 6185 ENSG00000217059 0.5714458 162 5 0.567095 155 5 0.6603175 71 5 0.6246884 154 8 0.545737 91 6 0.5667383 158 8 0.561733 115 9 0.689539 63 6 0.547917 59 3 0.5524691 28 1 0.592903 211 8 0.2944444 32 4 0.6715488 84 6 0.5656566 73 6 0.611111 57 5 0.3750000 33 5 0.6946115 296 6 0.729494 218 8 0.666463 69 5 0.7011775 116 8 0.6700000 35 3 0.8000000 18 1 0.2838828 69 6 0.5347222 53 3 0.483730 88 5 0.6121932 140 8 0.6870370 25 2 0.515306 21 1 0.4414286 130 6 0.6359890 108 8 0.6237733 177 8 0.7350649 138 8 0.5104051 146 5 0.5999186 90 8 0.459519 112 8 0.5000000 27 3 0.2989746 86 5 0.5458254 117 8 0.5969174 157 8 0.6737817 143 8 0.6060764 167 8 0.6705277 129 5 0.6435726 133 8 0.7272444 0.593960 0.5896825 0.6859901 0.581584 0.6083438 0.615383 0.6089744 0.5373264 0.6388889 0.561299 0.391667 0.6594066 0.6179924 0.743056 0.4416667 0.6699719 0.7187098 0.657433 0.6106884 0.8666667 0.8333333 0.6179792 0.5208333 0.5886243 0.62051091 0.6777778 0.592262 0.5523810 0.5434253 0.6747290 0.5863095 0.6103552 0.6449176 0.5177894 0.6000000 0.5547476 0.6115854 0.5970367 0.7479715 0.6311767 0.7909881 0.689166 1 0.6151448 0.6087824 0.01415229 5 0.6050499 0.6193478 -0.01429785 3.2742e-01 5.8610e-01 insignificant 1.00000 1.000000 insignificant 0.4811661 8.2759e-01 insignificant 1.00000 1.000000 insignificant 0.00424383 0.9293461 lowCoverage 1.00000 lowCoverage 0.6151448 0.5501730 0.07302018 6 0.6050499 0.5389577 0.06609224 6.4617e-04 0.9904884 weaklyHypermeth 1.3462e-02 1 weaklyHypermeth 1.8416e-02 0.9957857 weaklyHypermeth 4.4203e-01 1.0000 insignificant 0.1037306 6.2011e-02 insignificant 1.0000e+00 insignificant 0.6152442 0.6639232 -0.0434128 6 0.6028188 0.6131486 -0.0103298 4.8030e-01 1.6192e-01 insignificant 1.0000e+00 1.0000000 insignificant 6.8563e-01 1.4358e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.04867073 1.0347e-01 insignificant 1.0000000 insignificant 0.6087824 0.5501730 5.6320e-02 5 0.6193478 0.5389577 0.0803901 5.7740e-02 0.991113 insignificant 6.7139e-01 1 insignificant 3.6509e-01 0.99456 insignificant 1.0000e+00 1 insignificant 0.09948679 1.1264e-01 lowCoverage 1.0000e+00 lowCoverage 0.6066734 0.6639232 -0.05800222 5 0.5718188 0.6131486 -0.04132981 9.1903e-01 3.4679e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant 9.9115e-01 0.0907891 insignificant 1.0000000 1 insignificant -0.05291455 0.2477803 lowCoverage 1.000000 lowCoverage 0.5505226 0.6639232 -0.11405907 7 0.5006450 0.6131486 -0.1125036 9.9948e-01 2.9776e-04 weaklyHypometh 1.0000000 9.4569e-03 weaklyHypometh 0.99970575 1.4611e-03 weaklyHypometh 1.00000 5.8444e-02 weaklyHypometh -0.15240134 1.3378e-02 weaklyHypometh 0.441983 insignificant chr2 42222303 42223303 6220 PKDCC ENSG00000162878 0.3064281 189 6 0.264491 325 6 0.2315120 362 6 0.4265223 172 4 0.181591 207 5 0.3904265 344 5 0.187601 159 5 0.252361 261 4 0.126282 219 5 0.2636054 263 5 0.450262 177 5 0.2356804 166 4 0.1125059 210 4 0.1244027 126 4 0.215338 387 5 0.2142961 210 4 0.1111111 16 0 0.315860 204 4 0.276934 242 5 0.2950023 196 5 0.1041858 115 5 0.1928960 143 5 0.3703881 217 6 0.2337912 189 7 0.158159 98 5 0.3330404 320 6 0.1430556 420 5 0.085655 115 5 0.2997275 202 4 0.3100963 346 6 0.2557893 296 6 0.2021628 290 6 0.1303922 276 6 0.1095238 82 4 0.285145 161 6 0.2000000 22 3 0.2192547 110 5 0.2727184 234 6 0.1812108 194 4 0.2357744 186 5 0.2125000 164 4 0.2620515 156 4 0.1816855 146 5 0.1654830 0.145818 0.1456640 0.1752350 0.154166 0.2709897 0.142801 0.1431264 0.1381699 0.2469155 0.265945 0.231616 0.0544333 0.1497229 0.134868 0.2622774 0.0157978 0.1291966 0.081866 0.1424170 0.0801385 0.0153276 0.1693336 0.0875653 0.0668866 0.09139501 0.0902355 0.075504 0.2154867 0.0577033 0.0823123 0.1447037 0.0175425 0.0236967 0.0262391 0.0236967 0.0342366 0.0055109 0.0640637 0.0710374 0.0898104 0.0661125 0.080657 4 0.1957159 0.1414031 0.06721204 6 0.3038325 0.2374575 0.06637500 8.1886e-05 9.9989e-01 weaklyHypermeth 0.05084 1.000000 weaklyHypermeth 0.0011403 9.9246e-01 weaklyHypermeth 0.57013 1.000000 insignificant 0.02503167 0.4745547 lowCoverage 1.00000 lowCoverage 0.1957159 0.1740113 0.14441327 6 0.3038325 0.2715433 0.03228913 1.4782e-11 0.8514668 weaklyHypermeth 9.4243e-10 1 weaklyHypermeth 3.2547e-08 0.8015291 weaklyHypermeth 2.7123e-06 1.0000 weaklyHypermeth 0.0462716 2.3243e-01 lowCoverage 1.0000e+00 lowCoverage 0.1957552 0.0874704 0.0910654 5 0.3234276 0.1960677 0.1273599 4.5552e-05 9.8248e-01 weaklyHypermeth 3.5040e-03 1.0000000 weaklyHypermeth 3.2952e-04 9.9488e-01 weaklyHypermeth 3.6613e-02 1.0000000 weaklyHypermeth 0.03446619 2.1578e-01 lowCoverage 1.0000000 lowCoverage 0.1414031 0.1740113 7.7684e-02 6 0.2374575 0.2715433 -0.0340859 4.4147e-06 0.304102 weaklyHypermeth 1.5767e-04 1 weaklyHypermeth 3.0322e-05 0.71488 weaklyHypermeth 2.0214e-03 1 weaklyHypermeth 0.02123990 6.0127e-01 insignificant 1.0000e+00 insignificant 0.1414474 0.0874704 0.02413421 5 0.2523323 0.1960677 0.05626467 1.1591e-01 8.0887e-01 insignificant 1.0000e+00 1.0000000 insignificant 2.9964e-01 0.9123918 insignificant 1.0000000 1 insignificant 0.00943452 0.7640645 lowCoverage 1.000000 lowCoverage 0.1721404 0.0874704 -0.06156871 5 0.1674781 0.1960677 -0.0285896 9.8289e-01 7.5612e-08 weaklyHypometh 1.0000000 6.3010e-06 weaklyHypometh 0.99564442 7.7526e-05 weaklyHypometh 1.00000 5.9635e-03 weaklyHypometh -0.01180538 7.3264e-01 lowCoverage 1.000000 lowCoverage chr2 42296103 42297103 6223 EML4 ENSG00000143924 0.7311911 112 6 0.574828 168 6 0.5675240 72 6 0.7649573 101 3 0.494228 63 5 0.6716251 185 6 0.631481 59 6 0.607508 138 6 0.635582 53 5 0.6138889 55 6 0.684339 159 6 0.6854701 43 5 0.6224146 82 6 0.6984127 33 4 0.628583 55 6 0.6138889 20 2 0.6428478 170 4 0.588338 118 6 0.648990 49 4 0.6856728 195 6 0.7243590 43 5 0.7433333 38 2 0.5479167 56 5 0.4963518 67 5 0.703704 44 3 0.6452291 161 6 0.4680430 61 4 0.519231 37 4 0.6119048 77 4 0.6762395 123 6 0.7189886 135 6 0.6556976 203 5 0.4921212 115 6 0.6119048 42 5 0.508227 98 6 0.5666667 18 2 0.5524472 112 6 0.6432029 125 6 0.7148148 90 3 0.7263436 99 3 0.6560125 88 3 0.8696970 49 2 0.6975113 78 4 0.8443215 0.706425 0.7091368 0.8500084 0.677044 0.7951266 0.737473 0.7325800 0.7308979 0.7140523 0.776127 0.704374 0.6983207 0.7799370 0.725027 0.6057190 0.7123859 0.6890164 0.796346 0.7898345 0.8479135 0.6902722 0.6781046 0.7019179 0.7391068 0.76301672 0.5876995 0.657366 0.7584034 0.8011826 0.8124810 0.7563638 0.5937824 0.6668067 0.5417123 0.6234304 0.6391140 0.7352817 0.8319172 0.7903282 0.7482528 0.8467395 0.804410 1 0.6974093 0.6985646 0.00405689 6 0.6396571 0.6394574 0.00019968 3.1989e-01 4.5193e-01 insignificant 1.00000 1.000000 insignificant 0.6083472 5.2573e-01 insignificant 1.00000 1.000000 insignificant 0.01367209 0.6638675 lowCoverage 1.00000 lowCoverage 0.6974093 0.5921569 0.08964461 6 0.6396571 0.5665198 0.07313732 7.3878e-06 0.9626854 weaklyHypermeth 2.3087e-04 1 weaklyHypermeth 6.3886e-04 0.9823141 weaklyHypermeth 2.6619e-02 1.0000 weaklyHypermeth 0.0771603 2.1184e-02 weaklyHypermeth 8.1477e-01 insignificant 0.6974093 0.7698020 -0.0369815 3 0.6396571 0.7060776 -0.0664205 7.7805e-01 7.2336e-03 lowCoverage 1.0000e+00 0.5564282 lowCoverage 9.6780e-01 2.6152e-02 lowCoverage 1.0000e+00 1.0000000 lowCoverage -0.09328726 5.9009e-02 lowCoverage 1.0000000 lowCoverage 0.6985646 0.5921569 8.8077e-02 6 0.6394574 0.5665198 0.0729376 1.6135e-03 0.988156 weaklyHypermeth 2.8307e-02 1 weaklyHypermeth 1.7134e-02 0.94170 weaklyHypermeth 3.8076e-01 1 insignificant 0.06348817 1.0243e-01 lowCoverage 1.0000e+00 lowCoverage 0.6985646 0.7698020 -0.05445814 3 0.6394574 0.7060776 -0.06662017 9.6111e-01 7.6123e-03 lowCoverage 1.0000e+00 0.6920293 lowCoverage 9.6062e-01 0.0827689 lowCoverage 1.0000000 1 lowCoverage -0.10695935 0.0438416 lowCoverage 1.000000 lowCoverage 0.5921569 0.7698020 -0.15100914 3 0.5665198 0.7060776 -0.1395578 9.9923e-01 3.8655e-04 lowCoverage 1.0000000 1.1714e-02 lowCoverage 0.99998973 7.5861e-04 lowCoverage 1.00000 3.6124e-02 lowCoverage -0.17044752 5.4476e-03 lowCoverage 0.236854 lowCoverage chr2 42986203 42987203 6230 ENSG00000218916 0.9599833 416 6 0.882952 358 6 0.8197823 199 6 0.9231154 331 6 0.907758 140 7 0.9408781 540 6 0.882564 216 7 0.891969 248 7 0.922567 154 6 0.9657328 184 5 0.950210 429 7 0.8042550 127 5 0.8370370 189 5 0.8527244 120 5 0.912739 195 6 0.9335700 125 4 1.0000000 1 0 0.720867 373 6 0.919063 327 6 0.9539920 379 6 0.7088816 120 6 0.8972944 99 5 0.9098604 192 6 0.9507904 113 7 0.718100 278 6 0.8688760 555 7 0.7592676 192 6 0.827485 100 5 0.7840422 348 6 0.8925946 607 6 0.8929918 718 6 0.8974733 491 7 0.1419013 274 6 0.1728855 215 6 0.134800 378 6 0.4403378 118 6 0.2126218 281 6 0.4144646 630 7 0.9020440 252 6 0.7326172 283 6 0.7740376 226 6 0.8092971 369 6 0.8334550 209 6 0.9456805 0.959110 0.8366870 0.9093879 0.889863 0.9207398 0.806369 0.9305475 0.8920452 0.9339933 0.935517 0.817750 0.9606720 0.8232696 0.891297 0.9106920 NA 0.8412378 0.898874 0.9410243 0.8305299 0.8656393 0.9752663 0.9053960 0.9652278 0.94034858 0.9721275 0.927377 0.9293077 0.9255696 0.9462011 0.9044264 0.1684163 0.1812365 0.1968469 0.3782769 0.2527920 0.5128613 0.9429203 0.7845942 0.9245592 0.7805086 0.859176 5 0.9085330 0.9270341 -0.02019782 6 0.7857762 0.7545205 0.03125568 9.6400e-01 3.8177e-01 insignificant 1.00000 1.000000 insignificant 0.7810654 2.2157e-01 insignificant 1.00000 1.000000 insignificant 0.05678314 0.0531293 insignificant 1.00000 insignificant 0.9088206 0.3123679 0.59826086 6 0.7887756 0.2338220 0.55495362 1.1377e-62 1.0000000 hypermethylated 1.1377e-59 1 hypermethylated 1.9741e-17 1.0000000 hypermethylated 9.8703e-15 1.0000 hypermethylated 0.6462529 4.5491e-05 hypermethylated 4.0178e-03 hypermethylated 0.9090369 0.8409261 0.0694826 6 0.9137756 0.8143043 0.0994714 7.6327e-07 1.0000e+00 weaklyHypermeth 1.2721e-04 1.0000000 weaklyHypermeth 1.5173e-03 9.9979e-01 weaklyHypermeth 1.3793e-01 1.0000000 insignificant 0.08879776 3.0985e-02 weaklyHypermeth 0.9682809 insignificant 0.9282146 0.3125660 6.1798e-01 6 0.7555251 0.2633973 0.4921278 4.8181e-44 1.000000 hypermethylated 2.4091e-41 1 hypermethylated 6.7791e-14 1.00000 hypermethylated 3.3895e-11 1 hypermethylated 0.58946971 3.3541e-05 hypermethylated 3.7267e-03 hypermethylated 0.9272202 0.8409261 0.08980799 6 0.7874657 0.8143043 -0.02683854 7.8163e-08 1.0000e+00 weaklyHypermeth 1.1166e-05 1.0000000 weaklyHypermeth 8.2255e-04 0.9780263 weaklyHypermeth 0.0632734 1 weaklyHypermeth 0.03201462 0.4065854 insignificant 1.000000 insignificant 0.3125331 0.8408072 -0.52392956 6 0.2672252 0.7877763 -0.5205512 1.0000e+00 1.1287e-17 hypomethylated 1.0000000 3.7622e-15 hypomethylated 1.00000000 2.1172e-09 hypomethylated 1.00000 1.0586e-06 hypomethylated -0.55745509 3.8269e-05 hypomethylated 0.012126 hypomethylated chr2 43014803 43015803 6238 ENSG00000218916 0.9221873 339 5 0.631963 196 5 0.7924586 223 5 0.5704809 329 5 0.722908 136 5 0.7409723 519 5 0.689067 198 5 0.845758 197 5 0.811126 217 5 0.8932480 147 5 0.607101 282 5 0.9146809 84 4 0.7972270 148 4 0.7132999 110 4 0.854701 196 5 0.7845946 74 5 0.9719828 611 2 0.883642 641 5 0.902628 229 5 0.8617535 368 5 0.8334232 78 5 0.5100000 149 4 0.7829868 195 5 0.7328629 119 5 0.742457 125 5 0.8591295 290 5 0.8364948 185 5 0.688458 101 4 0.7262686 268 5 0.8522649 278 5 0.8775599 243 5 0.9229632 368 5 0.7229912 192 5 0.6269841 236 5 0.775789 197 3 0.5416667 28 3 0.6026217 176 5 0.7092661 273 5 0.4704860 335 5 0.6601715 302 5 0.6840068 306 5 0.6964939 434 5 0.6993909 252 5 0.8731789 0.750669 0.7319689 0.7808092 0.863663 0.7643049 0.851369 0.8079679 0.7857714 0.8513968 0.878524 0.835618 0.8032650 0.7740626 0.812287 0.8501853 0.9384633 0.7936579 0.830839 0.8443294 0.8158428 0.4936380 0.8299786 0.8344606 0.7391748 0.79760305 0.7870537 0.930656 0.7787091 0.8190005 0.8099724 0.8773050 0.8294360 0.7290920 0.7933217 0.5583557 0.9322842 0.6760213 0.4217067 0.5232407 0.5317309 0.5336836 0.591417 4 0.8462126 0.8115882 0.03367033 5 0.7505526 0.6253420 0.12521063 4.9417e-01 8.6955e-01 insignificant 1.00000 1.000000 insignificant 0.8085451 6.8360e-01 insignificant 1.00000 1.000000 insignificant 0.01518329 0.7124876 lowCoverage 1.00000 lowCoverage 0.8460805 0.8284936 0.02051037 5 0.7277751 0.5159354 0.21183974 3.6020e-01 0.0266044 inconclusive 1.0000e+00 1 insignificant 4.8885e-01 0.0252160 inconclusive 1.0000e+00 1.0000 insignificant 0.1323693 1.1904e-02 lowCoverage 5.1756e-01 lowCoverage 0.8470948 0.5696746 0.2899283 5 0.8531704 0.5991735 0.2539969 2.6066e-13 9.9639e-01 hypermethylated 1.0126e-10 1.0000000 hypermethylated 7.4044e-06 9.9200e-01 hypermethylated 1.8511e-03 1.0000000 hypermethylated 0.15347917 1.8531e-02 lowCoverage 0.6833659 lowCoverage 0.8115882 0.8300000 -1.2547e-02 5 0.6253420 0.5675289 0.0578131 9.5729e-01 0.436052 insignificant 1.0000e+00 1 insignificant 9.2746e-01 0.14779 insignificant 1.0000e+00 1 insignificant 0.11718596 2.9981e-02 lowCoverage 9.3691e-01 lowCoverage 0.8132052 0.5696746 0.24419004 5 0.8219171 0.5991735 0.22274365 6.6315e-08 9.9707e-01 hypermethylated 1.1052e-05 1.0000000 hypermethylated 6.5903e-04 0.9995844 hypermethylated 0.0632734 1 hypermethylated 0.13829588 0.0316801 lowCoverage 1.000000 lowCoverage 0.8353156 0.5696746 0.23092273 5 0.8107556 0.5991735 0.2115821 1.0649e-06 1.0000e+00 hypermethylated 0.0010649 1.0000e+00 hypermethylated 0.00012777 1.0000e+00 hypermethylated 0.12777 1.0000e+00 insignificant 0.02110992 7.1676e-01 lowCoverage 1.000000 lowCoverage chr2 43139803 43140803 6257 ENSG00000218916 0.7181094 90 5 0.840986 98 5 0.6753968 41 4 0.7669801 79 5 0.756133 39 5 0.7419208 80 6 0.702679 60 4 0.850694 79 5 0.680556 26 3 0.7666667 30 4 0.780830 148 5 0.7916667 29 5 0.8321789 67 6 0.7794913 47 6 0.742361 86 5 0.7222222 18 0 1.0000000 4 0 0.708730 46 3 0.831345 75 6 0.7918845 64 5 0.9166667 29 3 0.8125000 10 0 0.7760234 52 5 0.9532967 40 2 0.896190 42 5 0.8888889 118 6 0.8373016 32 4 0.430403 24 1 0.6038880 103 6 0.7587096 112 5 0.8642857 113 6 0.7928105 77 5 0.6855324 85 6 0.6746032 35 5 0.683013 83 6 0.6000000 9 1 0.6064815 75 2 0.7932540 100 5 0.5883295 59 5 0.9177350 82 5 0.8222222 63 5 0.6888889 41 5 0.8873955 75 6 0.7387396 0.834430 0.7885965 0.8765880 0.731602 0.8144086 0.739711 0.8558114 0.7635858 0.8109649 0.819877 0.898026 0.8256911 0.8234151 0.805702 0.8421053 NA 0.7264411 0.843638 0.8021629 0.9451754 0.8107391 0.7636657 0.8967611 0.9187657 0.90789474 0.8652882 0.618758 0.8244074 0.8945361 0.8714713 0.8110079 0.7870249 0.7678571 0.7791245 0.7249488 0.6660819 0.6592471 0.6412502 0.9307524 0.8584795 0.7719298 0.918294 1 0.8109453 0.8733333 -0.04399928 5 0.8090892 0.8102281 -0.00113896 8.7570e-01 2.9823e-02 weaklyHypometh 1.00000 1.000000 insignificant 0.9165564 1.0359e-01 insignificant 1.00000 1.000000 insignificant -0.02020547 0.6636262 lowCoverage 1.00000 lowCoverage 0.8109453 0.7157623 0.10541136 5 0.8090892 0.7204194 0.08866976 6.0929e-03 0.9993935 weaklyHypermeth 1.0689e-01 1 insignificant 4.0911e-01 0.9775767 insignificant 1.0000e+00 1.0000 insignificant 0.1002276 1.4735e-02 lowCoverage 6.1396e-01 lowCoverage 0.8104738 0.8437500 -0.0286121 5 0.7772707 0.8185453 -0.0412746 8.8349e-01 9.5103e-02 insignificant 1.0000e+00 1.0000000 insignificant 8.4251e-01 1.2161e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.00687266 9.1947e-01 lowCoverage 1.0000000 lowCoverage 0.8733333 0.7157623 1.5950e-01 5 0.8102281 0.7204194 0.0898087 1.4245e-04 0.996295 weaklyHypermeth 3.7486e-03 1 weaklyHypermeth 9.2581e-02 0.98021 insignificant 1.0000e+00 1 insignificant 0.12043306 3.1494e-02 lowCoverage 9.5435e-01 lowCoverage 0.8751678 0.8437500 0.01321477 5 0.8452662 0.8185453 0.02672081 4.2192e-01 7.7548e-01 insignificant 1.0000e+00 1.0000000 insignificant 2.6527e-01 0.7941246 insignificant 1.0000000 1 insignificant 0.01333281 0.8637788 lowCoverage 1.000000 lowCoverage 0.7150259 0.8437500 -0.13054599 5 0.6738226 0.8185453 -0.1447227 9.9063e-01 1.9784e-02 weaklyHypometh 1.0000000 3.3532e-01 insignificant 0.97535372 1.4070e-01 insignificant 1.00000 1.0000e+00 insignificant -0.10710025 1.7146e-01 lowCoverage 1.000000 lowCoverage chr2 43266003 43267003 6275 ENSG00000207087 0.7746784 66 5 0.716970 69 5 0.5721212 55 5 0.8256842 108 5 0.789286 30 3 0.7299291 162 5 0.600000 30 5 0.807234 70 5 0.648371 51 5 0.8071429 21 2 0.831281 166 5 0.7333333 12 0 0.7300000 54 5 0.8000000 28 2 0.854545 29 2 0.7333333 11 0 NA 0 0 0.801776 70 5 0.773502 80 5 0.7806391 102 5 0.7972222 27 2 0.8079365 38 5 0.7579710 63 5 0.7476190 48 5 0.747222 31 3 0.7001379 139 5 0.6575036 57 5 0.838095 22 2 0.5285714 57 2 0.7518823 119 5 0.7583984 110 5 0.8166932 168 5 0.6072619 75 5 0.5750505 52 5 0.672500 110 5 0.5000000 2 0 0.6882609 64 5 0.5910092 143 5 0.6750000 74 5 0.7787037 79 5 0.7604329 88 5 0.7272727 34 2 0.7173333 83 5 0.7728591 0.709312 0.5784143 0.8320404 0.800147 0.7394424 0.618721 0.8047318 0.6785800 0.7920744 0.831284 0.730594 0.7394977 0.8013699 0.840598 0.7625571 NA 0.8008805 0.783095 0.7378463 0.8006088 0.8066971 0.7530276 0.7573386 0.7448630 0.70558337 0.6654164 0.831703 0.5484344 0.7600760 0.7579618 0.8096102 0.6106980 0.5731355 0.6949201 0.5579403 0.6679571 0.5956481 0.6822407 0.7797438 0.7785566 0.7559153 0.709635 0 0.7633965 0.7428896 0.01951431 5 0.7536866 0.7396911 0.01399545 3.7374e-01 8.5035e-01 insignificant 1.00000 1.000000 insignificant 0.3763130 7.1006e-01 insignificant 1.00000 1.000000 insignificant 0.01071100 0.7235890 lowCoverage 1.00000 lowCoverage 0.7633965 0.6367713 0.11866046 5 0.7536866 0.6204162 0.13327031 6.9516e-05 0.9999920 weaklyHypermeth 1.9862e-03 1 weaklyHypermeth 9.3131e-04 0.9998803 weaklyHypermeth 3.5549e-02 1.0000 weaklyHypermeth 0.1474683 1.4677e-03 lowCoverage 6.9892e-02 lowCoverage 0.7633965 0.7458101 0.0179600 5 0.7536866 0.7348236 0.0188629 5.1859e-01 6.8828e-01 insignificant 1.0000e+00 1.0000000 insignificant 5.1998e-01 8.4789e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.02140022 4.1036e-01 lowCoverage 1.0000000 lowCoverage 0.7428896 0.6367713 1.0424e-01 5 0.7396911 0.6204162 0.1192749 2.2013e-04 0.999923 weaklyHypermeth 5.2411e-03 1 weaklyHypermeth 2.7968e-03 0.99989 weaklyHypermeth 8.4752e-02 1 weaklyHypermeth 0.13675735 3.0234e-03 lowCoverage 1.3743e-01 lowCoverage 0.7428896 0.7458101 -0.00156449 5 0.7396911 0.7348236 0.00486748 6.5521e-01 4.3225e-01 insignificant 1.0000e+00 1.0000000 insignificant 6.2237e-01 0.6420445 insignificant 1.0000000 1 insignificant 0.01068923 0.7281607 lowCoverage 1.000000 lowCoverage 0.6367713 0.7458101 -0.09966131 5 0.6204162 0.7348236 -0.1144074 9.9594e-01 1.6511e-03 weaklyHypometh 1.0000000 4.1279e-02 weaklyHypometh 0.99454842 2.1809e-02 weaklyHypometh 1.00000 4.9566e-01 insignificant -0.12606812 5.1061e-03 lowCoverage 0.236854 lowCoverage chr2 43300003 43301003 6279 ENSG00000207087 0.0716493 584 13 0.085383 730 13 0.0609051 602 13 0.0484471 525 10 0.056377 417 13 0.2320491 633 13 0.074571 866 13 0.104819 597 13 0.095912 783 13 0.0381642 596 12 0.137887 593 13 0.0681521 639 13 0.0473054 591 13 0.0000000 9 0 0.049040 731 12 0.0476199 584 12 0.0240834 763 11 0.120023 779 11 0.083963 473 13 0.0695802 535 13 0.1079262 209 13 0.0129348 229 5 0.1684045 417 13 0.0458167 265 13 0.062252 251 8 0.0514752 829 13 0.1912560 251 12 0.041139 168 12 0.0935317 504 13 0.0768825 774 13 0.1219171 764 13 0.0783348 678 13 0.0737016 642 13 0.0017889 452 13 0.102299 166 8 0.0041667 150 10 0.0177110 210 13 0.0000000 689 13 0.0792256 602 13 0.1424468 600 13 0.0421502 485 9 0.1032231 437 10 0.1111182 551 11 0.0887237 0.042045 0.0809565 0.0861017 0.077297 0.2602939 0.094726 0.0324171 0.0502191 0.0579514 0.135931 0.078017 0.0636070 0.0546996 0.064066 0.0406670 0.0202915 0.1010082 0.029261 0.0927083 0.1486770 0.0150411 0.1581016 0.0717305 0.0690732 0.08463511 0.0758793 0.070173 0.1016084 0.0986571 0.0676286 0.1205247 0.0036722 0.0030100 0.0483502 0.0066946 0.0092280 0.0000000 0.0770160 0.1219271 0.0229827 0.0712090 0.093806 8 0.0678812 0.0764188 -0.00648446 13 0.1216061 0.1706307 -0.04902461 9.0590e-01 3.9986e-01 insignificant 1.00000 1.000000 insignificant 0.8485287 1.4501e-01 insignificant 1.00000 1.000000 insignificant -0.01185934 0.5329145 insignificant 1.00000 insignificant 0.0678304 0.0051971 0.06309019 13 0.1088055 0.0366231 0.07218239 1.5079e-11 1.0000000 weaklyHypermeth 9.4243e-10 1 weaklyHypermeth 9.6648e-13 0.9999998 weaklyHypermeth 2.4897e-10 1.0000 weaklyHypermeth 0.0425187 7.2612e-02 insignificant 1.0000e+00 insignificant 0.0678417 0.0818692 0.0046131 11 0.1148502 0.0920000 0.0228502 4.8691e-01 3.4673e-04 inconclusive 1.0000e+00 0.0433418 inconclusive 5.7499e-01 4.0073e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.01983624 3.5101e-01 insignificant 1.0000000 insignificant 0.0764188 0.0052038 7.0128e-02 13 0.1706307 0.0409317 0.1296990 1.2526e-16 1.000000 weaklyHypermeth 1.2526e-14 1 weaklyHypermeth 3.8182e-12 1.00000 weaklyHypermeth 1.2727e-09 1 weaklyHypermeth 0.05437804 3.8984e-02 weaklyHypermeth 9.9958e-01 insignificant 0.0764188 0.0818998 0.00616749 11 0.1706307 0.0974118 0.07321896 9.7433e-02 1.3158e-02 inconclusive 1.0000e+00 1.0000000 insignificant 3.0916e-02 0.7008211 weaklyHypermeth 1.0000000 1 insignificant -0.00797690 0.7313542 insignificant 1.000000 insignificant 0.0051993 0.0818692 -0.08415465 11 0.0386577 0.0920000 -0.0533423 1.0000e+00 4.3056e-12 weaklyHypometh 1.0000000 6.1508e-10 weaklyHypometh 1.00000000 1.9706e-07 weaklyHypometh 1.00000 6.5688e-05 weaklyHypometh -0.06235494 3.1525e-02 weaklyHypometh 0.900705 insignificant chr2 43507503 43508503 6293 ENSG00000211259 0.8509031 345 6 0.818326 171 6 0.5982456 73 6 0.8675537 149 6 0.744048 42 6 0.8631828 300 4 0.976190 46 3 0.827052 119 6 0.861111 45 3 0.8115079 43 6 0.790595 198 6 1.0000000 3 0 0.7924242 93 6 0.7500000 45 3 0.729293 44 6 0.9333333 21 3 NA 0 0 0.866380 195 6 0.880920 196 6 0.7494937 279 3 0.9583333 24 3 0.8333333 12 0 0.8501562 139 6 0.9523810 49 3 0.966667 23 2 0.8380500 199 6 0.9334758 56 6 1.000000 3 0 0.8716892 208 6 0.7836039 294 6 0.8158310 251 6 0.8533500 237 6 0.8064035 101 6 0.8185224 128 6 0.526998 140 6 1.0000000 18 3 0.7731260 71 3 0.7423734 266 6 0.8432066 175 6 0.9289684 257 6 0.8574423 222 6 0.8827666 243 6 0.8927890 181 6 0.9087204 0.862555 0.5611995 0.8998599 0.797757 0.8861466 0.961794 0.8771252 0.8391473 0.8431617 0.861401 0.960391 0.7787526 0.8081395 0.817242 0.9023256 NA 0.9164439 0.891527 0.8608816 0.9358878 0.8255814 0.8120437 0.9269103 0.9418605 0.91478639 0.8886206 0.940839 0.9194283 0.8716666 0.9132187 0.8556479 0.8320224 0.8397621 0.2861077 1.0000000 0.8417436 0.7380102 0.8736225 0.9477936 0.9090244 0.8868305 0.915253 0 0.8649771 0.8975218 -0.02590266 6 0.8234198 0.8533880 -0.02996822 9.6369e-01 1.4291e-01 insignificant 1.00000 1.000000 insignificant 0.9945509 2.4057e-02 weaklyHypometh 1.00000 1.000000 insignificant -0.06120099 0.0471594 lowCoverage 1.00000 lowCoverage 0.8649771 0.6988950 0.16979750 6 0.8234198 0.7407075 0.08271231 2.5355e-04 0.7602237 weaklyHypermeth 5.8964e-03 1 weaklyHypermeth 5.4315e-01 0.4694852 insignificant 1.0000e+00 1.0000 insignificant 0.0489677 4.8363e-01 lowCoverage 1.0000e+00 lowCoverage 0.8649771 0.9016698 -0.0379846 6 0.8234198 0.8786063 -0.0551865 9.9216e-01 2.2955e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant 9.9267e-01 3.8332e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant -0.05416305 5.1073e-02 lowCoverage 1.0000000 lowCoverage 0.8975218 0.6988950 1.9814e-01 6 0.8533880 0.7407075 0.1126805 1.0766e-03 0.956964 weaklyHypermeth 2.0433e-02 1 weaklyHypermeth 1.9288e-01 0.96820 insignificant 1.0000e+00 1 insignificant 0.11016865 1.4242e-01 lowCoverage 1.0000e+00 lowCoverage 0.8975218 0.9016698 -0.00951477 6 0.8533880 0.8786063 -0.02521826 8.5101e-01 3.7400e-01 insignificant 1.0000e+00 1.0000000 insignificant 4.3531e-01 0.8832994 insignificant 1.0000000 1 insignificant 0.00703794 0.7836850 lowCoverage 1.000000 lowCoverage 0.6988950 0.9016698 -0.20726985 6 0.7407075 0.8786063 -0.1378988 9.9445e-01 1.8712e-02 weaklyHypometh 1.0000000 3.2261e-01 insignificant 0.97561924 3.1445e-01 insignificant 1.00000 1.0000e+00 insignificant -0.10313071 1.6175e-01 insignificant 1.000000 insignificant chr2 44161403 44162403 6303 ENSG00000219391 0.6515630 153 5 0.577652 67 5 0.4666667 92 5 0.6447619 69 5 0.424167 38 3 0.6163888 181 5 0.545657 96 5 0.520256 72 5 0.535978 82 5 0.6820055 69 5 0.610217 129 5 0.6170940 52 5 0.7204431 100 5 NA 0 0 0.590330 68 5 0.6136134 91 5 0.5608947 40 5 0.559481 74 5 0.620135 116 5 0.6250744 142 5 0.6100000 22 2 0.6000000 48 5 0.6689737 74 5 0.5311111 43 5 0.609524 29 4 0.6120998 162 5 0.5857143 30 4 0.721429 27 2 0.5288399 83 5 0.6020067 161 5 0.5893789 122 5 0.5898344 257 5 0.5472239 78 5 0.6234615 80 5 0.502724 104 5 0.6419048 32 5 0.5147475 42 5 0.5380863 120 5 0.6173176 128 5 0.6146667 107 5 0.6067418 106 5 0.6330451 121 5 0.6818182 110 5 0.6541193 0.586668 0.4754428 0.6500690 0.449366 0.6159233 0.540492 0.5228354 0.5429887 0.6862906 0.618872 0.625480 0.7195359 NA 0.598683 0.6215991 0.5642554 0.5669396 0.617282 0.6264239 0.6282609 0.5942029 0.6582462 0.5284219 0.6142167 0.61611040 0.5962733 0.741460 0.5364154 0.6105008 0.5945607 0.5954528 0.5520071 0.6116360 0.4995987 0.6381643 0.5349583 0.5407212 0.6304349 0.6191304 0.6108024 0.6430941 0.688735 4 0.5967649 0.6077505 -0.00107204 5 0.6008182 0.6015285 -0.00071033 6.6306e-01 5.3823e-01 insignificant 1.00000 1.000000 insignificant 0.8653959 3.4849e-01 insignificant 1.00000 1.000000 insignificant -0.01552978 0.4899448 lowCoverage 1.00000 lowCoverage 0.5967649 0.5460526 0.05337783 5 0.6008182 0.5458389 0.05497932 7.1406e-03 0.9693512 weaklyHypermeth 1.2311e-01 1 insignificant 3.9918e-02 0.7962118 weaklyHypermeth 7.2577e-01 1.0000 insignificant 0.0271882 3.6504e-01 lowCoverage 1.0000e+00 lowCoverage 0.5967649 0.6451049 -0.0332021 5 0.6008182 0.6299238 -0.0291056 9.0923e-01 5.7028e-02 insignificant 1.0000e+00 1.0000000 insignificant 9.6989e-01 4.0458e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant -0.04217173 6.3149e-02 lowCoverage 1.0000000 lowCoverage 0.6077505 0.5460526 5.2575e-02 5 0.6015285 0.5458389 0.0556896 1.1655e-02 0.970683 weaklyHypermeth 1.7630e-01 1 insignificant 3.4194e-02 0.93356 weaklyHypermeth 6.3322e-01 1 insignificant 0.04271798 1.6044e-01 lowCoverage 1.0000e+00 lowCoverage 0.6077505 0.6451049 -0.02744188 5 0.6015285 0.6299238 -0.02839525 9.3858e-01 2.6663e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.3207e-01 0.3968283 insignificant 1.0000000 1 insignificant -0.02664195 0.2099784 lowCoverage 1.000000 lowCoverage 0.5460526 0.6451049 -0.07973102 5 0.5458389 0.6299238 -0.0840849 9.8959e-01 2.3773e-03 weaklyHypometh 1.0000000 5.5285e-02 weaklyHypometh 0.98904736 3.6870e-03 weaklyHypometh 1.00000 1.2290e-01 insignificant -0.06935993 3.4843e-02 weaklyHypometh 0.933765 insignificant chr2 44167803 44168803 6304 ENSG00000219391 0.0464300 884 17 0.087418 660 17 0.0521370 634 17 0.0459608 876 17 0.052568 496 17 0.0441032 930 17 0.091981 763 17 0.079539 562 17 0.111526 917 17 0.0607927 738 17 0.071400 589 17 0.0572453 619 17 0.0332861 828 17 0.0412491 220 15 0.073116 719 17 0.0616051 450 17 0.0260229 601 17 0.037858 975 17 0.030651 371 17 0.1107260 825 17 0.0475703 213 17 0.0342825 597 16 0.0754527 555 17 0.0762032 368 17 0.122165 382 15 0.0783449 932 17 0.1008801 535 17 0.062448 290 17 0.0328853 530 17 0.0873195 986 17 0.0380508 829 17 0.0440397 987 17 0.0028703 694 17 0.0960652 433 17 0.000000 303 10 0.0158263 206 17 0.0647469 297 18 0.0036111 701 17 0.1216867 1152 17 0.0464659 897 17 0.0228800 829 17 0.0507464 979 17 0.1637045 1029 17 0.0571980 0.108688 0.0664666 0.0577576 0.066836 0.0625546 0.049723 0.0957990 0.0797647 0.0773339 0.090255 0.068155 0.0358264 0.0438336 0.084891 0.0726649 0.0346250 0.0405317 0.034821 0.0628400 0.0801396 0.0409293 0.0574590 0.0645288 0.0841007 0.09208435 0.0596333 0.048817 0.0467598 0.1043696 0.0442170 0.0514461 0.0055156 0.0386551 0.0096655 0.0201733 0.0188562 0.0062939 0.0689719 0.0460673 0.0256168 0.0473632 0.058964 17 0.0619463 0.0592726 -0.00155287 17 0.0642448 0.0973370 -0.03309216 7.3203e-01 3.7940e-01 insignificant 1.00000 1.000000 insignificant 0.2731161 4.4521e-01 insignificant 1.00000 1.000000 insignificant -0.00585601 0.5622399 insignificant 1.00000 insignificant 0.0619463 0.0117692 0.04994560 17 0.0642448 0.0402511 0.02399373 3.8042e-13 0.9999999 weaklyHypermeth 3.1702e-11 1 weaklyHypermeth 1.0615e-10 1.0000000 weaklyHypermeth 1.7692e-08 1.0000 weaklyHypermeth 0.0302608 1.3040e-01 insignificant 1.0000e+00 insignificant 0.0619463 0.0440033 0.0104154 17 0.0642448 0.1530467 -0.0888018 4.3268e-03 7.8921e-02 weaklyHypermeth 1.8812e-01 1.0000000 insignificant 9.7553e-03 1.6589e-01 weaklyHypermeth 5.7384e-01 1.0000000 insignificant -0.02031592 4.9078e-01 insignificant 1.0000000 insignificant 0.0592726 0.0117692 5.1098e-02 17 0.0973370 0.0402511 0.0570859 9.2005e-11 1.000000 weaklyHypermeth 5.7503e-09 1 weaklyHypermeth 2.4325e-08 1.00000 weaklyHypermeth 3.0406e-06 1 weaklyHypermeth 0.03611681 8.6805e-02 insignificant 1.0000e+00 insignificant 0.0592726 0.0440033 0.00971464 17 0.0973370 0.1530467 -0.05570966 1.7372e-01 4.7718e-01 insignificant 1.0000e+00 1.0000000 insignificant 2.7190e-01 0.7546311 insignificant 1.0000000 1 insignificant -0.01445991 0.6246776 insignificant 1.000000 insignificant 0.0117692 0.0440033 -0.04072773 17 0.0402511 0.1530467 -0.1127956 1.0000e+00 4.0933e-06 weaklyHypometh 1.0000000 2.2147e-04 weaklyHypometh 0.99999999 2.4254e-04 weaklyHypometh 1.00000 1.5159e-02 weaklyHypometh -0.05057671 1.4910e-01 insignificant 1.000000 insignificant chr2 44434403 44435403 6312 SLC3A1 ENSG00000138079 0.7904128 219 5 0.787247 100 5 0.7454637 84 5 0.8690476 96 5 0.828571 45 2 0.8294594 238 5 0.781250 80 5 0.849041 121 5 0.740294 121 5 0.8028057 89 5 0.768602 170 5 0.7800000 51 5 0.8303217 125 5 0.9090909 11 1 0.810792 116 5 0.6611111 38 5 0.7045455 42 5 0.839394 131 5 0.770308 109 5 0.7933232 186 5 0.5416117 45 5 0.7708515 80 5 0.8102733 92 5 0.7916436 73 5 0.810000 57 5 0.7857204 149 5 0.7112631 91 5 0.716667 40 3 0.8032143 107 5 0.8175310 165 5 0.8489008 142 5 0.8139742 221 5 0.7470930 90 5 0.7821864 102 5 0.847600 149 5 0.8561905 35 5 0.7096725 86 5 0.8577300 132 5 0.8445171 197 5 0.8448344 165 5 0.7822832 156 5 0.8289164 140 5 0.7929110 181 5 0.7731893 0.783420 0.7202025 0.8627657 0.795518 0.8171964 0.760110 0.8347635 0.7326967 0.7892608 0.762962 0.761765 0.8124044 NA 0.799882 0.6775599 0.7027629 0.8208768 0.756786 0.7839845 0.6142318 0.7754333 0.7866109 0.7900816 0.7710784 0.78120246 0.7312307 0.721732 0.7892507 0.7933327 0.8244723 0.8010616 0.7385146 0.7493499 0.8264195 0.8239963 0.7362249 0.8319616 0.8285892 0.8261447 0.7596787 0.8103108 0.787047 5 0.8139963 0.8137876 0.00344146 5 0.7955405 0.7893909 0.00614954 6.0357e-01 6.7365e-01 insignificant 1.00000 1.000000 insignificant 0.5906653 7.0758e-01 insignificant 1.00000 1.000000 insignificant 0.02608322 0.3441422 lowCoverage 1.00000 lowCoverage 0.8139963 0.8181818 0.00011559 5 0.7955405 0.8076909 -0.01215045 4.9461e-01 0.3039490 insignificant 1.0000e+00 1 insignificant 6.3355e-01 0.1379101 insignificant 1.0000e+00 1.0000 insignificant -0.0055246 8.5274e-01 lowCoverage 1.0000e+00 lowCoverage 0.8139963 0.8152563 -0.0200127 5 0.7955405 0.8190312 -0.0234908 9.6352e-01 1.2088e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.8367e-01 9.1257e-02 insignificant 1.0000e+00 1.0000000 insignificant -0.02413831 2.0869e-01 lowCoverage 1.0000000 lowCoverage 0.8137876 0.8181818 -3.8535e-03 5 0.7893909 0.8076909 -0.0183000 5.8915e-01 0.499700 insignificant 1.0000e+00 1 insignificant 6.4787e-01 0.26487 insignificant 1.0000e+00 1 insignificant -0.03160778 3.8362e-01 lowCoverage 1.0000e+00 lowCoverage 0.8137876 0.8152563 -0.02289762 5 0.7893909 0.8190312 -0.02964032 8.9069e-01 2.0422e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.5135e-01 0.1620186 insignificant 1.0000000 1 insignificant -0.05022153 0.0832724 lowCoverage 1.000000 lowCoverage 0.8181818 0.8152563 -0.02085212 5 0.8076909 0.8190312 -0.0113403 7.5768e-01 1.3859e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.27003815 3.0543e-01 insignificant 1.00000 1.0000e+00 insignificant -0.01861375 5.4034e-01 insignificant 1.000000 insignificant chr2 46044003 46045003 6336 PRKCE ENSG00000171132 0.7781899 404 6 0.682011 313 6 0.5133929 53 6 0.8442241 252 6 0.723901 51 5 0.7383917 496 6 0.371429 39 2 0.703193 199 6 0.785256 68 6 0.5446429 50 6 0.610379 402 6 0.1785714 12 0 0.6392196 92 6 0.6666667 54 6 0.802534 83 6 0.7500000 26 3 0.6558442 504 2 0.792928 409 6 0.800647 371 6 0.7180268 397 6 0.7623206 80 5 0.8215812 54 4 0.7932375 154 6 0.7178571 77 6 0.853367 57 6 0.6100575 234 6 0.9211905 71 5 0.600000 14 1 0.7361928 245 6 0.8367048 237 6 0.6377433 261 6 0.6838426 311 6 0.6510697 161 6 0.5852273 173 6 0.769271 83 6 0.7380952 47 3 0.6963294 121 6 0.6995024 302 6 0.6652834 244 6 0.8220068 355 6 0.8442138 534 6 0.7271731 323 6 0.7927327 237 6 0.8201606 0.778590 0.7441327 0.8831244 0.698757 0.8605870 0.532143 0.8186766 0.8202839 0.7808163 0.849374 0.287500 0.8726568 0.7385714 0.842995 0.8238095 0.7572511 0.8287609 0.836133 0.8418350 0.8756938 0.8697802 0.8056067 0.7563265 0.8954834 0.85864954 0.9261735 0.598571 0.8232251 0.8409148 0.8003524 0.7969079 0.8194962 0.8282468 0.8554762 0.7178841 0.8515526 0.7705181 0.8202350 0.8421598 0.8633053 0.7923348 0.843410 2 0.8563743 0.8540390 -0.01489660 6 0.6132636 0.6650585 -0.05179497 8.0097e-01 2.7377e-01 insignificant 1.00000 1.000000 insignificant 0.9985775 4.6056e-02 weaklyHypometh 1.00000 1.000000 insignificant -0.08286882 0.0861250 insignificant 1.00000 insignificant 0.8563743 0.8602029 -0.01237601 6 0.6132636 0.6422133 -0.02894978 3.0702e-01 0.4936307 insignificant 1.0000e+00 1 insignificant 9.4385e-01 0.0298866 weaklyHypometh 1.0000e+00 1.0000 insignificant -0.0249434 5.8440e-01 insignificant 1.0000e+00 insignificant 0.8573102 0.9043119 -0.0344086 6 0.6542072 0.7142298 -0.0600226 8.5156e-01 3.3008e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.9067e-01 9.1219e-02 insignificant 1.0000e+00 1.0000000 insignificant -0.10530955 4.7761e-02 weaklyHypometh 1.0000000 insignificant 0.8540390 0.8602029 6.1859e-03 6 0.6650585 0.6422133 0.0228452 3.6572e-05 0.282677 weaklyHypermeth 1.0449e-03 1 weaklyHypermeth 6.8288e-02 0.51039 insignificant 1.0000e+00 1 insignificant 0.05792543 1.6573e-01 insignificant 1.0000e+00 insignificant 0.8562640 0.9043119 -0.01421720 6 0.7124766 0.7142298 -0.00175329 9.7188e-01 5.6221e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.0539e-01 0.7962927 insignificant 1.0000000 1 insignificant -0.02244073 0.6214755 insignificant 1.000000 insignificant 0.8600451 0.9043119 -0.02132663 6 0.5974900 0.7142298 -0.1167398 3.2525e-01 3.7582e-02 weaklyHypometh 1.0000000 5.6092e-01 insignificant 0.20517571 4.3447e-01 insignificant 1.00000 1.0000e+00 insignificant -0.08036616 9.2820e-02 insignificant 1.000000 insignificant chr2 46381803 46382803 6351 EPAS1 ENSG00000116016 0.6522539 237 7 0.639030 124 7 0.4434316 103 7 0.7978695 162 7 0.579464 65 5 0.6972935 241 7 0.612887 125 7 0.690695 105 7 0.736239 97 7 0.6399685 78 6 0.807076 221 7 0.7516282 62 5 0.8152034 103 7 0.8080622 62 4 0.830913 73 4 0.4626984 50 3 0.8106061 78 4 0.779234 165 7 0.729141 127 6 0.8247401 225 7 0.8421875 45 4 0.6736364 28 2 0.7766255 145 7 0.5979167 67 6 0.763492 42 5 0.6910530 140 7 0.8400488 80 4 0.687500 29 1 0.7689136 88 4 0.8139429 149 7 0.7478391 118 7 0.7694288 228 7 0.7346024 127 7 0.6293016 72 5 0.629292 121 5 0.9098485 32 3 0.7957908 92 6 0.6755194 133 5 0.7861167 259 7 0.7505440 237 7 0.7660120 198 7 0.6739164 140 6 0.7041080 231 7 0.7595197 0.710582 0.5077019 0.8490160 0.684602 0.8234737 0.785989 0.7756162 0.8378146 0.7964323 0.837618 0.705002 0.8520103 0.8259816 0.849185 0.7035263 0.7882801 0.8726963 0.845646 0.8569443 0.9149701 0.7443963 0.8124518 0.7968064 0.7631404 0.76915780 0.8333845 0.898204 0.8354071 0.8534910 0.8404579 0.8270016 0.7321116 0.7565092 0.7120755 0.8791950 0.8642002 0.7828137 0.8530111 0.8002185 0.8302449 0.7861274 0.782249 2 0.7734718 0.8205349 -0.03250355 6 0.7256031 0.7399638 -0.01436062 9.1138e-01 7.2256e-02 insignificant 1.00000 1.000000 insignificant 0.9481818 1.1045e-01 insignificant 1.00000 1.000000 insignificant -0.04229361 0.2153027 insignificant 1.00000 insignificant 0.7734718 0.7798960 0.00272726 5 0.7256031 0.7433667 -0.01776359 5.2567e-01 0.5228345 insignificant 1.0000e+00 1 insignificant 5.0906e-01 0.2559074 insignificant 1.0000e+00 1.0000 insignificant -0.0236374 6.5860e-01 insignificant 1.0000e+00 insignificant 0.7734718 0.8197183 -0.0347367 7 0.7256031 0.7745303 -0.0489271 8.3840e-01 4.6885e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant 7.8891e-01 1.4038e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.03071768 3.6631e-01 insignificant 1.0000000 insignificant 0.8205349 0.7798960 3.4802e-02 5 0.7399638 0.7433667 -0.0034030 5.0578e-02 0.817776 insignificant 6.0937e-01 1 insignificant 1.7268e-01 0.78571 insignificant 1.0000e+00 1 insignificant 0.01865622 7.1651e-01 insignificant 1.0000e+00 insignificant 0.8205349 0.8197183 -0.00198868 6 0.7399638 0.7745303 -0.03456649 3.2562e-01 5.0333e-01 insignificant 1.0000e+00 1.0000000 insignificant 2.9990e-01 0.6200400 insignificant 1.0000000 1 insignificant 0.01157593 0.7014109 insignificant 1.000000 insignificant 0.7798960 0.8197183 -0.04545382 5 0.7433667 0.7745303 -0.0311635 3.7092e-01 2.3824e-02 weaklyHypometh 1.0000000 3.8426e-01 insignificant 0.66127540 2.6918e-01 insignificant 1.00000 1.0000e+00 insignificant -0.00708029 8.8970e-01 insignificant 1.000000 insignificant chr2 47034503 47035503 6396 TTC7A ENSG00000068724 0.6595470 299 8 0.543924 281 8 0.6322256 144 8 0.6606605 212 8 0.597421 96 7 0.7220067 350 8 0.665463 146 7 0.670703 168 8 0.663328 144 7 0.7308774 119 8 0.651876 268 8 0.7648810 73 6 0.7375291 164 8 0.6716247 46 2 0.733155 142 8 0.6296875 60 8 0.7132326 67 6 0.684908 190 8 0.667141 191 8 0.6130838 255 8 0.8448980 25 2 0.7846700 104 7 0.7134521 188 8 0.7529412 83 4 0.808442 45 5 0.7474351 319 8 0.8706710 85 4 0.776716 63 4 0.6303158 217 8 0.6851707 312 8 0.7176348 265 8 0.6998039 370 8 0.5768197 203 8 0.6374310 133 8 0.650451 141 8 0.6539683 39 5 0.7445131 104 6 0.6837703 277 8 0.6290416 187 8 0.7007325 243 8 0.6673538 214 8 0.6277481 257 8 0.6827471 241 8 0.7274935 0.647610 0.6980950 0.7626662 0.721254 0.7717985 0.704232 0.7639868 0.6809182 0.7784273 0.705031 0.809008 0.7774333 0.7670027 0.765856 0.7456470 0.7359213 0.7155284 0.718304 0.6950834 0.7551695 0.7504255 0.7430170 0.7408018 0.8391856 0.80880648 0.8097071 0.730560 0.7211303 0.7640171 0.7555201 0.7672185 0.6404930 0.7208592 0.6646891 0.6896816 0.7728675 0.7214412 0.7352939 0.7871237 0.7555459 0.7768978 0.748528 4 0.6986823 0.7384393 -0.03943743 8 0.6607729 0.7112409 -0.05046802 9.9616e-01 6.9215e-05 weaklyHypometh 1.00000 0.034608 weaklyHypometh 0.9953397 6.9787e-05 weaklyHypometh 1.00000 0.017447 weaklyHypometh -0.08201547 0.0022237 weaklyHypometh 0.64304 insignificant 0.6986823 0.6532887 0.03865458 8 0.6607729 0.6807939 -0.02002104 2.1520e-02 0.4452546 weaklyHypermeth 3.1188e-01 1 insignificant 2.6911e-02 0.5405467 weaklyHypermeth 5.7257e-01 1.0000 insignificant 0.0128381 6.2815e-01 insignificant 1.0000e+00 insignificant 0.6986823 0.7276708 -0.0309951 8 0.6607729 0.6062323 0.0545406 8.9514e-01 1.6874e-01 insignificant 1.0000e+00 1.0000000 insignificant 8.4109e-01 3.7715e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.00913903 6.3703e-01 insignificant 1.0000000 insignificant 0.7384393 0.6532887 7.9015e-02 8 0.7112409 0.6807939 0.0304470 4.8983e-06 0.996057 weaklyHypermeth 1.6891e-04 1 weaklyHypermeth 3.0345e-04 0.99554 weaklyHypermeth 1.2644e-02 1 weaklyHypermeth 0.09485353 7.9918e-03 weaklyHypermeth 3.1967e-01 insignificant 0.7384393 0.7276708 0.01101751 8 0.7112409 0.6062323 0.10500866 5.4028e-02 7.5361e-01 insignificant 1.0000e+00 1.0000000 insignificant 8.0010e-03 0.9288548 weaklyHypermeth 0.4000518 1 insignificant 0.09115450 0.0022464 weaklyHypermeth 0.200005 insignificant 0.6532887 0.7276708 -0.06558904 8 0.6807939 0.6062323 0.0745617 9.5130e-01 4.9923e-03 weaklyHypometh 1.0000000 1.0853e-01 insignificant 0.85620785 5.8458e-02 insignificant 1.00000 1.0000e+00 insignificant -0.00369902 8.9357e-01 insignificant 1.000000 insignificant chr2 47035203 47036203 6397 TTC7A ENSG00000068724 0.6775338 327 9 0.576198 311 9 0.5937243 151 9 0.6787571 229 9 0.619929 101 8 0.7401965 385 9 0.638917 151 8 0.707291 183 9 0.700736 150 8 0.7449069 126 9 0.683823 301 9 0.7910053 75 6 0.7389148 172 9 0.7372998 48 2 0.746931 149 9 0.6263889 65 9 0.7450956 69 6 0.709750 205 9 0.690237 199 9 0.6385306 274 9 0.8448980 25 2 0.8085955 108 7 0.7378833 203 9 0.7433551 86 4 0.808442 45 5 0.7669509 345 9 0.8868371 86 4 0.776716 63 4 0.6506175 223 9 0.7100507 345 9 0.7490087 281 9 0.7259905 401 9 0.6145805 215 9 0.6272114 144 9 0.663649 167 9 0.6347222 41 5 0.7605549 113 7 0.6903932 309 9 0.6506514 204 9 0.7083435 256 9 0.6942135 236 9 0.6558824 268 9 0.7100609 255 9 0.7311628 0.656167 0.6819864 0.7650437 0.724330 0.7762484 0.692348 0.7732061 0.6933823 0.7815021 0.714186 0.816468 0.7763617 0.7761042 0.769422 0.7399577 0.7462368 0.7240364 0.724425 0.7008265 0.7612653 0.7601745 0.7504512 0.7379059 0.8419995 0.81327017 0.8171404 0.737617 0.7255133 0.7696840 0.7650701 0.7737913 0.6512810 0.7140074 0.6687728 0.6822721 0.7773995 0.7225568 0.7387406 0.7864247 0.7615438 0.7820616 0.755561 4 0.7093435 0.7498869 -0.04168395 9 0.6798518 0.7327094 -0.05285757 9.9868e-01 3.3211e-05 weaklyHypometh 1.00000 0.033211 weaklyHypometh 0.9982115 4.7103e-05 weaklyHypometh 1.00000 0.015701 weaklyHypometh -0.07813712 0.0021442 weaklyHypometh 0.64304 insignificant 0.7093435 0.6632963 0.04288552 9 0.6798518 0.6888015 -0.00894964 1.1400e-02 0.5657821 weaklyHypermeth 1.8095e-01 1 insignificant 1.5052e-02 0.6585532 weaklyHypermeth 3.8546e-01 1.0000 insignificant 0.0241231 3.7207e-01 insignificant 1.0000e+00 insignificant 0.7093435 0.7366694 -0.0300933 9 0.6798518 0.6326220 0.0472298 9.1727e-01 1.8345e-01 insignificant 1.0000e+00 1.0000000 insignificant 8.5472e-01 4.2580e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.00547794 7.6857e-01 insignificant 1.0000000 insignificant 0.7498869 0.6632963 8.5318e-02 9 0.7327094 0.6888015 0.0439079 1.4414e-07 0.998846 weaklyHypermeth 6.8636e-06 1 weaklyHypermeth 4.0544e-05 0.99865 weaklyHypermeth 2.3850e-03 1 weaklyHypermeth 0.10226018 4.0493e-03 weaklyHypermeth 1.6872e-01 insignificant 0.7498869 0.7366694 0.01396261 9 0.7327094 0.6326220 0.10008740 2.4857e-02 8.4334e-01 weaklyHypermeth 8.8272e-01 1.0000000 insignificant 3.8302e-03 0.9643667 weaklyHypermeth 0.2393876 1 insignificant 0.08361506 0.0020121 weaklyHypermeth 0.200005 insignificant 0.6632963 0.7366694 -0.06965641 9 0.6888015 0.6326220 0.0561795 9.7714e-01 1.9768e-03 weaklyHypometh 1.0000000 4.7067e-02 weaklyHypometh 0.91863449 2.9497e-02 weaklyHypometh 1.00000 6.2759e-01 insignificant -0.01864512 4.8681e-01 insignificant 1.000000 insignificant chr2 47049603 47050603 6399 TTC7A ENSG00000068724 0.7902439 141 6 0.665489 127 6 0.7116402 43 5 0.8194037 117 5 0.477175 60 3 0.5992488 74 6 0.719048 60 6 0.737302 71 6 0.767857 39 5 0.8287037 26 1 0.642929 152 6 0.8611111 28 3 0.8876543 108 6 0.7750000 24 3 0.883838 50 4 0.7687075 30 3 0.4000000 7 0 0.782559 202 6 0.728865 41 1 0.9275794 51 4 0.8200000 20 3 1.0000000 6 0 0.6473626 86 3 0.6666667 26 4 0.670833 56 3 0.7575914 77 6 0.8382756 44 4 0.759259 16 1 0.7842693 98 6 0.7239405 85 6 0.8877551 52 6 0.7824074 56 4 0.6911508 94 6 0.7156593 57 6 0.669340 64 6 0.8000000 8 0 0.6754274 60 6 0.7225490 78 6 0.6869048 93 4 0.6894594 128 6 0.8263605 140 5 0.8119183 91 5 0.6579404 118 5 0.7705663 0.757047 0.8092548 0.7970575 0.679295 0.6912596 0.737772 0.7456013 0.7021792 0.8055556 0.754105 0.811409 0.8669178 0.7322034 0.810991 0.8321227 0.6061361 0.7849699 0.860722 0.8741761 0.7545198 0.9546092 0.7416037 0.7005650 0.7684923 0.72137418 0.8113328 0.943503 0.7538535 0.8510664 0.8801453 0.8130885 0.6696812 0.6535668 0.6803831 0.9056685 0.6353759 0.7070788 0.7481840 0.8064930 0.7822437 0.8193925 0.710897 0 0.7784679 0.7858293 -0.01269428 6 0.6090803 0.6914616 -0.08238120 9.5096e-01 5.0163e-01 insignificant 1.00000 1.000000 insignificant 0.9951262 2.9372e-01 insignificant 1.00000 1.000000 insignificant -0.03947907 0.3498277 lowCoverage 1.00000 lowCoverage 0.7793914 0.6759003 0.09529943 6 0.7116747 0.7220966 -0.01042188 1.5413e-04 0.9451292 weaklyHypermeth 3.6697e-03 1 weaklyHypermeth 5.4006e-02 0.9459827 insignificant 8.7107e-01 1.0000 insignificant 0.0263632 4.6564e-01 lowCoverage 1.0000e+00 lowCoverage 0.7788528 0.7754386 0.0013394 5 0.6227154 0.6972314 -0.0745160 6.8410e-01 2.5698e-01 insignificant 1.0000e+00 1.0000000 insignificant 8.3391e-01 5.0623e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.00420101 9.2882e-01 lowCoverage 1.0000000 lowCoverage 0.7880259 0.6759003 1.0654e-01 6 0.7461649 0.7220966 0.0240682 2.6592e-04 0.993358 weaklyHypermeth 6.0436e-03 1 weaklyHypermeth 2.1802e-02 0.99414 weaklyHypermeth 4.5420e-01 1 insignificant 0.06584228 7.8391e-02 lowCoverage 1.0000e+00 lowCoverage 0.7854839 0.7754386 0.02071656 5 0.6528942 0.6972314 -0.04433711 5.2060e-01 5.7438e-01 insignificant 1.0000e+00 1.0000000 insignificant 3.6680e-01 0.9554905 insignificant 1.0000000 1 insignificant 0.04368008 0.3606973 lowCoverage 1.000000 lowCoverage 0.6759003 0.7768014 -0.09541029 5 0.7220966 0.7968358 -0.0747392 9.9918e-01 6.7718e-03 weaklyHypometh 1.0000000 1.3544e-01 insignificant 0.99863845 9.7964e-02 insignificant 1.00000 1.0000e+00 insignificant -0.02216220 5.9968e-01 insignificant 1.000000 insignificant chr2 47352603 47353603 6431 CALM2 ENSG00000143933 0.1674682 388 12 0.179104 234 16 0.2087542 238 16 0.0449586 393 12 0.065762 238 12 0.1292939 409 14 0.234798 278 14 0.126898 288 14 0.148430 194 14 0.1734462 259 14 0.103483 268 14 0.1680060 131 14 0.1350841 147 14 0.0851893 135 14 0.105829 216 14 0.0571429 74 11 0.2500000 12 1 0.126786 872 9 0.030466 282 12 0.0748739 288 13 0.1164099 124 12 0.1014447 194 14 0.0978378 175 12 0.1077098 112 10 0.194646 1089 14 0.0759008 370 15 0.2257998 235 14 0.064139 98 8 0.2046032 254 10 0.0904351 381 16 0.1140677 365 16 0.1878664 293 14 0.0317570 303 16 0.1030826 235 10 0.214087 374 14 0.0761905 320 12 0.0907887 176 11 0.2192135 490 15 0.2017117 455 12 0.1726891 348 12 0.0501775 260 10 0.0564376 554 12 0.1051324 286 12 0.1282573 0.032775 0.0744473 0.0414238 0.041645 0.0529838 0.101391 0.1046718 0.0670778 0.0775664 0.057155 0.087191 0.1104777 0.0655047 0.024166 0.0219780 0.0419469 0.0728683 0.029693 0.0466192 0.1296426 0.0535800 0.0673779 0.0483035 0.0734385 0.07713714 0.0993182 0.069283 0.0981796 0.0498458 0.0511948 0.1777765 0.0187090 0.0802296 0.0808175 0.0163170 0.0595841 0.1421444 0.0762690 0.0934157 0.0738379 0.0711402 0.074863 8 0.0761744 0.0829255 -0.01924529 14 0.1171175 0.1242368 -0.00711929 9.9889e-01 1.1362e-01 insignificant 1.00000 1.000000 insignificant 0.9989455 6.8244e-01 insignificant 1.00000 1.000000 insignificant -0.00094973 0.9644815 insignificant 1.00000 insignificant 0.0762030 0.0846113 -0.00935582 12 0.1224410 0.1312596 -0.00881859 7.6249e-01 0.1716388 insignificant 1.0000e+00 1 insignificant 4.9259e-01 0.9008754 insignificant 1.0000e+00 1.0000 insignificant 0.0082686 8.1610e-01 insignificant 1.0000e+00 insignificant 0.0762887 0.0646348 -0.0122632 12 0.1282716 0.1516515 -0.0233799 9.9004e-01 1.6795e-03 weaklyHypometh 1.0000e+00 0.1526851 insignificant 9.9899e-01 2.0621e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant 0.01355893 6.9963e-01 insignificant 1.0000000 insignificant 0.0835594 0.0842993 8.0682e-05 12 0.1752864 0.1110658 0.0642206 6.8626e-01 0.877386 insignificant 1.0000e+00 1 insignificant 5.2391e-01 0.99510 insignificant 1.0000e+00 1 insignificant 0.00921835 8.0034e-01 insignificant 1.0000e+00 insignificant 0.0829932 0.0646348 0.00719955 12 0.1360689 0.1516515 -0.01558258 9.7455e-01 2.9506e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.9829e-01 0.5758917 insignificant 1.0000000 1 insignificant 0.01450866 0.6872011 insignificant 1.000000 insignificant 0.0846561 0.0646348 -0.00013889 12 0.1375101 0.1516515 -0.0141414 9.8884e-01 7.0594e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.99995804 2.1250e-01 insignificant 1.00000 1.0000e+00 insignificant 0.00529031 9.0635e-01 insignificant 1.000000 insignificant chr2 47425103 47426103 6439 EPCAM ENSG00000119888 0.3409411 204 9 0.313236 279 9 0.2260989 219 8 0.2387582 164 9 0.261599 169 10 0.3683621 294 9 0.290233 200 10 0.293575 233 8 0.319930 210 10 0.3504167 227 10 0.315789 307 10 0.2986111 142 4 0.3632450 250 10 0.3070478 179 10 0.407764 246 10 0.3500000 107 6 0.3251300 834 8 0.327778 138 7 0.273947 179 8 0.3762735 252 10 0.1731602 62 8 0.3783333 107 7 0.3030093 114 10 0.2807063 197 8 0.352618 125 9 0.2963301 288 10 0.2776786 164 8 0.422451 116 10 0.3334656 169 10 0.4547415 272 10 0.3014836 247 8 0.2570861 228 9 0.2866928 180 10 0.3019048 120 8 0.280478 224 10 0.3333333 45 5 0.3450100 191 10 0.3185558 218 9 0.3136025 286 9 0.3227345 274 10 0.2421108 270 9 0.3300926 143 6 0.3425605 187 9 0.2072032 0.171169 0.2115901 0.1779894 0.186210 0.2083981 0.154631 0.2049942 0.1919060 0.1811575 0.168833 0.142733 0.2108954 0.1819072 0.184606 0.1671018 0.1770834 0.2035683 0.192852 0.2172397 0.1593933 0.1980853 0.1958152 0.2195376 0.2207117 0.17229511 0.1493846 0.237777 0.2269095 0.2208753 0.1737174 0.2007565 0.1836920 0.1477061 0.1873026 0.2254134 0.2390894 0.1817808 0.1873739 0.2109316 0.1732431 0.2329743 0.201369 6 0.2611215 0.2254667 -0.00982818 9 0.3232935 0.3146177 0.00867586 9.0544e-01 1.2814e-01 insignificant 1.00000 1.000000 insignificant 0.9522095 4.1815e-01 insignificant 1.00000 1.000000 insignificant -0.00181846 0.9410758 insignificant 1.00000 insignificant 0.2611307 0.2484663 0.00658381 9 0.3299566 0.3064005 0.02355606 3.0621e-01 0.0348169 inconclusive 1.0000e+00 1 insignificant 7.9976e-01 0.2775786 insignificant 1.0000e+00 1.0000 insignificant 0.0064410 6.6813e-01 insignificant 1.0000e+00 insignificant 0.2611307 0.2982759 -0.0068782 9 0.3299566 0.3255833 0.0043733 8.7174e-01 3.8692e-01 insignificant 1.0000e+00 1.0000000 insignificant 8.4386e-01 5.6485e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.00721658 7.3477e-01 insignificant 1.0000000 insignificant 0.2256361 0.2484663 1.6745e-02 9 0.3280677 0.3064005 0.0216672 2.8937e-01 0.719043 insignificant 1.0000e+00 1 insignificant 4.6907e-01 0.78047 insignificant 1.0000e+00 1 insignificant 0.00825942 7.3867e-01 insignificant 1.0000e+00 insignificant 0.2256361 0.2982759 0.00325892 9 0.3280677 0.3255833 0.00248445 4.9864e-01 3.9512e-01 insignificant 1.0000e+00 1.0000000 insignificant 7.4398e-01 0.5973259 insignificant 1.0000000 1 insignificant 0.00903505 0.7530050 insignificant 1.000000 insignificant 0.2484663 0.2982759 -0.01281749 9 0.3064005 0.3255833 -0.0191828 5.8299e-01 2.3573e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.70610099 3.1501e-01 insignificant 1.00000 1.0000e+00 insignificant 0.00077562 9.7102e-01 insignificant 1.000000 insignificant chr2 47712403 47713403 6445 KCNK12 ENSG00000184261 0.9328628 257 5 0.848279 93 4 0.7630952 55 4 0.9128781 273 5 1.000000 18 1 0.9593437 225 5 0.900568 41 4 0.958333 77 4 0.860412 80 4 0.9568803 94 4 0.941361 138 4 0.8392857 19 1 0.8844418 82 4 0.9642857 30 4 0.887500 58 4 0.8125000 29 4 0.9270833 29 4 0.867506 323 5 0.887987 53 4 0.9375025 173 4 0.7916667 25 3 0.8034916 71 4 0.9144022 94 4 0.9333640 85 4 0.937729 60 4 0.7782145 137 4 0.8171791 51 4 0.920635 65 4 0.8663095 85 4 0.9354515 99 4 0.9686420 109 4 0.9022456 208 5 0.7574952 91 4 0.9296537 74 4 1.000000 79 3 0.9583333 12 1 0.7414530 57 4 0.9514243 118 5 0.9073261 226 5 0.8934427 231 5 0.8553986 264 5 0.8612266 224 5 0.8816329 206 5 0.9499380 0.851519 0.7660022 0.9014342 1.000000 0.9495017 0.900546 0.9633936 0.8562610 0.9552786 0.942093 0.848837 0.8876979 0.9612403 0.887597 0.8042636 0.9198966 0.8746521 0.893386 0.9195551 0.7997416 0.8034042 0.9159926 0.9349778 0.9395746 0.91497496 0.8177984 0.918051 0.8666076 0.9195639 0.9555556 0.9307271 0.7527827 0.9310380 0.9648275 0.9547804 0.7402769 0.9344398 0.8972106 0.8990782 0.8177449 0.8409194 0.873024 4 0.9110387 0.9051565 0.00502373 4 0.9067867 0.8915184 0.01526829 2.3278e-01 8.0603e-01 lowCoverage 1.00000 1.000000 lowCoverage 0.6205313 8.2746e-01 lowCoverage 1.00000 1.000000 lowCoverage 0.02132775 0.3690201 lowCoverage 1.00000 lowCoverage 0.9110387 0.8886311 0.01769325 4 0.9067867 0.9076544 -0.00086767 2.4513e-01 0.5257604 lowCoverage 1.0000e+00 1 lowCoverage 4.9057e-01 0.6157500 lowCoverage 1.0000e+00 1.0000 lowCoverage 0.0123787 8.0217e-01 lowCoverage 1.0000e+00 lowCoverage 0.9110387 0.8757602 0.0389884 5 0.9067867 0.8808270 0.0259597 1.2731e-02 7.2142e-01 weaklyHypermeth 4.7153e-01 1.0000000 insignificant 3.3921e-02 9.8387e-01 weaklyHypermeth 1.0000e+00 1.0000000 insignificant 0.02229992 1.8774e-01 lowCoverage 1.0000000 lowCoverage 0.9051565 0.8886311 1.7977e-02 4 0.8915184 0.9076544 -0.0161360 4.8405e-01 0.614886 lowCoverage 1.0000e+00 1 lowCoverage 7.6712e-01 0.66822 lowCoverage 1.0000e+00 1 lowCoverage -0.00894905 8.6109e-01 lowCoverage 1.0000e+00 lowCoverage 0.9051565 0.8757602 0.03900600 4 0.8915184 0.8808270 0.01069145 4.6372e-02 3.5909e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 5.3602e-02 0.9459170 lowCoverage 1.0000000 1 lowCoverage 0.00097217 0.9645502 lowCoverage 1.000000 lowCoverage 0.8886311 0.8757602 0.02931300 4 0.9076544 0.8808270 0.0268274 8.2159e-02 6.3608e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage 0.15481182 6.7530e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.00992122 8.3843e-01 lowCoverage 1.000000 lowCoverage chr2 51031903 51032903 6494 ENSG00000216011 0.8387772 147 6 0.832361 106 6 0.7227982 137 6 0.7976852 135 6 0.821367 152 6 0.7875892 137 6 0.806871 126 6 0.837335 97 6 0.780282 145 6 0.8705230 78 6 0.836338 169 6 0.7758333 128 6 0.8156224 136 6 0.7962963 65 6 0.805380 137 6 0.7718787 145 6 0.7722222 98 4 0.754585 115 4 0.807239 65 3 0.8255291 97 6 0.9305556 25 2 0.8543956 48 3 0.8551757 136 6 0.9246032 33 5 0.835714 31 2 0.7292140 93 4 0.8658009 60 4 0.791083 63 6 0.7751967 94 6 0.8867754 86 6 0.7152304 92 4 0.8389595 156 6 0.7506924 111 6 0.8481029 65 3 0.913933 108 6 0.9166667 20 1 0.6738757 66 6 0.8552836 68 6 0.8089850 113 3 0.8760684 117 3 0.8093185 112 3 0.8650407 136 4 0.7736808 162 3 0.8143121 0.758058 0.7165360 0.7668731 0.774822 0.7693250 0.777794 0.8361612 0.7391247 0.8314915 0.822901 0.779268 0.8121994 0.7012012 0.765224 0.7295239 0.7126126 0.7256992 0.821082 0.7998284 0.9099099 0.7501485 0.8473666 0.9192407 0.8658135 0.78011095 0.8357245 0.781484 0.7679022 0.8676924 0.7575821 0.8203706 0.7049536 0.7404920 0.9097975 0.8684599 0.7025552 0.7666793 0.7695117 0.8293341 0.7912205 0.8490442 0.782951 2 0.7850932 0.7829880 -0.03597092 6 0.8017224 0.8256998 -0.02397748 8.5404e-01 4.0563e-02 weaklyHypometh 1.00000 1.000000 insignificant 0.9701302 4.2746e-02 weaklyHypometh 1.00000 1.000000 insignificant -0.03073309 0.1721411 lowCoverage 1.00000 lowCoverage 0.7850932 0.7922374 0.02107564 6 0.8017224 0.8064416 -0.00471922 9.6719e-03 0.1434529 weaklyHypermeth 1.6120e-01 1 insignificant 1.8990e-01 0.1026821 insignificant 1.0000e+00 1.0000 insignificant -0.0236000 5.7858e-01 lowCoverage 1.0000e+00 lowCoverage 0.7850932 0.7531250 -0.0303947 3 0.8017224 0.8242371 -0.0225148 9.2292e-01 9.6181e-02 lowCoverage 1.0000e+00 1.0000000 lowCoverage 9.6520e-01 9.1033e-02 lowCoverage 1.0000e+00 1.0000000 lowCoverage -0.02379308 2.9754e-01 lowCoverage 1.0000000 lowCoverage 0.7829880 0.7922374 4.1425e-02 6 0.8256998 0.8064416 0.0192583 5.6608e-03 0.506273 weaklyHypermeth 9.1303e-02 1 weaklyHypermeth 9.0416e-02 0.70404 insignificant 1.0000e+00 1 insignificant 0.00713305 8.7538e-01 lowCoverage 1.0000e+00 lowCoverage 0.7829880 0.7531250 0.00910019 3 0.8256998 0.8242371 0.00146269 6.6050e-01 6.0623e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 6.3650e-01 0.6554344 lowCoverage 1.0000000 1 lowCoverage 0.00694001 0.8060877 lowCoverage 1.000000 lowCoverage 0.7922374 0.7531250 -0.04717132 3 0.8064416 0.8242371 -0.0177956 5.8036e-01 5.3919e-03 lowCoverage 1.0000000 1.1472e-01 lowCoverage 0.69005257 7.8401e-02 lowCoverage 1.00000 1.0000e+00 lowCoverage -0.00019304 9.9659e-01 lowCoverage 1.000000 lowCoverage chr2 54034703 54035703 6534 ASB3 ENSG00000115239 0.5999581 330 8 0.487693 192 8 0.5358456 124 7 0.5986905 195 8 0.580952 82 8 0.5816012 327 8 0.534190 99 8 0.430270 168 8 0.538088 123 7 0.4855925 143 8 0.457818 249 8 0.5828400 100 7 0.5278664 146 8 0.8333333 14 2 0.555907 139 8 0.3713942 106 7 0.6023810 90 8 0.586338 193 8 0.618011 219 8 0.5116749 322 8 0.6064738 64 5 0.5118912 83 8 0.5488382 206 8 0.6879444 73 6 0.535088 63 8 0.5762460 218 8 0.6067011 114 8 0.410823 70 7 0.5309921 138 8 0.4954569 281 8 0.4704101 246 8 0.5035422 452 8 0.5722520 186 8 0.5257293 119 8 0.436834 202 8 0.5359375 92 7 0.4197917 88 7 0.4578175 250 8 0.6718319 350 8 0.5620053 266 8 0.5689635 243 8 0.6147998 307 8 0.6187063 345 8 0.6488231 0.539050 0.5821763 0.6436639 0.570588 0.6257841 0.558947 0.5897330 0.5827024 0.5578686 0.558966 0.548003 0.5820978 0.6025776 0.604657 0.4485577 0.6509524 0.6371835 0.616445 0.5832329 0.6349287 0.5434931 0.6007246 0.6105191 0.6038700 0.57470841 0.6213914 0.612366 0.5960242 0.6134156 0.5341484 0.6015782 0.5564362 0.5402069 0.4588519 0.5786642 0.5092892 0.4977647 0.7145844 0.5995140 0.6079434 0.6564521 0.610797 7 0.5798869 0.5921315 0.00095655 8 0.5408835 0.5304805 0.01040305 4.2490e-01 5.2629e-01 insignificant 1.00000 1.000000 insignificant 0.1883343 2.7550e-01 insignificant 1.00000 1.000000 insignificant 0.01065510 0.7199466 insignificant 1.00000 insignificant 0.5802506 0.5250800 0.07354831 8 0.5975878 0.5404765 0.05711130 8.5573e-05 0.9998028 weaklyHypermeth 2.2519e-03 1 weaklyHypermeth 4.5483e-03 0.9998967 weaklyHypermeth 1.3783e-01 1.0000 insignificant 0.0596287 9.0593e-02 insignificant 1.0000e+00 insignificant 0.5801072 0.5850430 -0.0509209 8 0.5499687 0.6458526 -0.0958839 9.9976e-01 6.7785e-03 weaklyHypometh 1.0000e+00 0.5564282 insignificant 9.9998e-01 3.8435e-03 weaklyHypometh 1.0000e+00 0.3494108 insignificant -0.05623907 6.9877e-02 insignificant 1.0000000 insignificant 0.5931864 0.5250800 7.0635e-02 8 0.5557724 0.5404765 0.0152959 1.5236e-04 0.993419 weaklyHypermeth 3.8785e-03 1 weaklyHypermeth 8.4448e-03 0.96513 weaklyHypermeth 2.1116e-01 1 insignificant 0.04897359 1.6059e-01 insignificant 1.0000e+00 insignificant 0.5930758 0.5850430 -0.05120315 8 0.5557724 0.6458526 -0.09008022 9.9989e-01 1.1656e-03 weaklyHypometh 1.0000e+00 0.2913944 insignificant 9.9505e-01 0.0039067 weaklyHypometh 1.0000000 1 insignificant -0.06689418 0.0383278 weaklyHypometh 1.000000 insignificant 0.5235546 0.5847682 -0.12241378 8 0.4830360 0.6015842 -0.1185482 1.0000e+00 7.6441e-07 weaklyHypometh 1.0000000 5.0960e-05 weaklyHypometh 1.00000000 2.3715e-05 weaklyHypometh 1.00000 2.1559e-03 weaklyHypometh -0.11586776 5.7111e-03 weaklyHypometh 0.237964 insignificant chr2 55936803 55937803 6616 PNPT1 ENSG00000138035 0.8787960 540 16 0.837417 110 10 0.7734788 114 7 0.8917491 393 15 0.814769 91 8 0.8561900 453 15 0.809369 86 8 0.815160 128 8 0.815732 99 9 0.8439909 108 7 0.855953 287 15 0.9117063 70 6 0.7349005 129 8 NA 0 0 0.765625 123 8 0.7229798 55 6 0.8160317 69 7 0.871293 410 15 0.870635 150 13 0.8345377 323 15 0.8470899 34 4 0.8095379 109 8 0.8218391 259 16 0.9331481 63 5 0.798730 99 8 0.8224274 246 14 0.8524730 115 8 0.895833 29 2 0.8580680 110 9 0.8174151 240 14 0.8853061 177 12 0.9111187 480 15 0.6780105 143 10 0.7593205 153 14 0.818376 339 15 0.8350340 85 8 0.7328869 78 6 0.7783791 213 15 0.8914870 328 15 0.8978354 461 15 0.8845762 421 15 0.9156747 305 15 0.9066032 379 15 0.9024988 0.760671 0.8112700 0.8498598 0.831172 0.8623265 0.761345 0.7944200 0.7601036 0.9075907 0.895099 0.926909 0.8909555 NA 0.842831 0.7532250 0.8730646 0.8677470 0.873238 0.8741994 0.8280566 0.8573371 0.9049273 0.8456566 0.7967811 0.91347617 0.8071036 0.955307 0.8684693 0.8743371 0.8928919 0.9079396 0.7830397 0.7894209 0.8491755 0.9336959 0.7952691 0.8505706 0.9282543 0.8766332 0.9181715 0.9240730 0.934940 3 0.8587480 0.8592555 0.00077425 14 0.8651045 0.8624752 0.00262930 6.9272e-01 7.9255e-01 insignificant 1.00000 1.000000 insignificant 0.9958391 2.4320e-01 insignificant 1.00000 1.000000 insignificant -0.02703063 0.1268330 insignificant 1.00000 insignificant 0.8585588 0.8170129 0.04164631 13 0.8482425 0.7968323 0.05141024 2.6648e-05 0.9567098 weaklyHypermeth 7.8375e-04 1 weaklyHypermeth 4.3053e-02 0.9419439 weaklyHypermeth 7.6329e-01 1.0000 insignificant 0.0603837 5.1731e-02 insignificant 1.0000e+00 insignificant 0.8585588 0.9128828 -0.0443110 14 0.8482425 0.8987859 -0.0505434 9.6963e-01 1.5345e-04 weaklyHypometh 1.0000e+00 0.0219219 weaklyHypometh 9.7679e-01 1.2013e-04 weaklyHypometh 1.0000e+00 0.0422317 weaklyHypometh -0.07185035 1.3753e-05 weaklyHypometh 0.0045844 weaklyHypometh 0.8587513 0.8170129 4.6725e-02 13 0.8452845 0.7968323 0.0484523 1.1991e-03 0.984731 weaklyHypermeth 2.1802e-02 1 weaklyHypermeth 4.4535e-03 0.99845 weaklyHypermeth 1.2371e-01 1 insignificant 0.08741437 1.1191e-02 weaklyHypermeth 4.3041e-01 insignificant 0.8587513 0.9128828 -0.03940458 14 0.8452845 0.8987859 -0.05350133 9.9938e-01 6.1314e-04 weaklyHypometh 1.0000e+00 0.2043785 insignificant 9.8805e-01 0.0387645 weaklyHypometh 1.0000000 1 insignificant -0.04481972 0.0054257 weaklyHypometh 0.311057 insignificant 0.8170129 0.9128828 -0.08573553 13 0.7968323 0.8987859 -0.1019536 9.9997e-01 6.3096e-06 weaklyHypometh 1.0000000 3.0046e-04 weaklyHypometh 0.99993505 5.3979e-04 weaklyHypometh 1.00000 2.8410e-02 weaklyHypometh -0.13223409 1.9896e-03 weaklyHypometh 0.153049 insignificant chr2 60295303 60296303 6693 ENSG00000209301 0.3017446 104 4 0.353271 179 5 0.4872520 103 5 0.4301242 84 3 0.415397 87 5 0.6084674 170 5 0.439333 85 5 0.539034 137 5 0.354668 104 5 0.4442941 111 5 0.701556 184 5 0.4243590 45 4 0.3920136 213 5 NA 0 0 0.252188 130 5 0.5214286 32 4 0.1398148 165 5 0.595809 111 3 0.457459 130 5 0.4642936 141 5 0.7897436 44 4 0.0417895 106 3 0.5492727 110 5 0.4878788 46 4 0.594048 23 3 0.5252122 238 5 0.6987051 89 5 0.766667 37 5 0.5119351 144 5 0.5886325 209 5 0.2710496 214 5 0.6449477 117 5 0.1854656 230 5 0.4200428 153 5 0.882979 85 2 0.1663866 44 3 0.7042448 62 4 0.1649948 250 5 0.0283810 195 5 0.1053830 131 5 0.0890572 104 3 0.3573296 94 3 0.1513601 167 5 0.3847675 0.355371 0.5578109 0.3945946 0.373881 0.5282583 0.438221 0.4674135 0.3062302 0.4228181 0.668047 0.415076 0.3131786 NA 0.209544 0.6103652 0.1607700 0.4224188 0.371500 0.3354025 0.6921792 0.0628453 0.4988927 0.5066074 0.4125940 0.46245982 0.6146931 0.909774 0.4481854 0.5099277 0.2127401 0.6853833 0.1451713 0.2207706 0.4719004 0.0980919 0.6165640 0.0773198 0.0498031 0.1380976 0.1112977 0.1666386 0.067116 3 0.4393089 0.5265069 -0.09589655 5 0.4256374 0.5220617 -0.09642431 9.9892e-01 4.9157e-03 weaklyHypometh 1.00000 0.546184 insignificant 0.9996394 1.0923e-02 weaklyHypometh 1.00000 1.000000 insignificant -0.10113003 0.1514933 lowCoverage 1.00000 lowCoverage 0.4393089 0.3822816 0.08952813 5 0.4256374 0.3244698 0.10116755 8.0408e-04 0.9143722 weaklyHypermeth 1.6410e-02 1 weaklyHypermeth 2.3499e-02 0.9569841 weaklyHypermeth 5.2219e-01 1.0000 insignificant 0.0173412 8.9848e-01 lowCoverage 1.0000e+00 lowCoverage 0.4393089 0.0723589 0.2961614 3 0.4256374 0.1152767 0.3103607 3.0377e-13 1.0000e+00 lowCoverage 1.0126e-10 1.0000000 lowCoverage 1.6736e-08 9.9996e-01 lowCoverage 1.6736e-05 1.0000000 lowCoverage 0.29172454 3.1532e-03 lowCoverage 0.1854846 lowCoverage 0.5265069 0.3822816 1.9054e-01 5 0.5220617 0.3244698 0.1975919 5.2632e-04 0.999547 weaklyHypermeth 1.0965e-02 1 weaklyHypermeth 9.2740e-03 0.99279 weaklyHypermeth 2.2619e-01 1 insignificant 0.11847121 4.2427e-01 lowCoverage 1.0000e+00 lowCoverage 0.5265069 0.0723589 0.36551415 3 0.5220617 0.1152767 0.40678497 1.0464e-10 1.0000e+00 lowCoverage 1.0464e-07 1.0000000 lowCoverage 2.2910e-07 0.9999932 lowCoverage 0.0002291 1 lowCoverage 0.39285457 0.0004160 lowCoverage 0.097933 lowCoverage 0.3822816 0.0723589 0.15508840 3 0.3244698 0.1152767 0.2091931 6.1836e-03 9.9852e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage 0.07417120 9.9663e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.27438337 8.8784e-02 lowCoverage 1.000000 lowCoverage chr2 62373903 62374903 6727 ENSG00000209133 0.7345271 144 6 0.619064 284 7 0.6569340 225 7 0.6972682 223 7 0.781789 143 7 0.7271415 422 7 0.667465 249 7 0.534075 297 7 0.639570 307 7 0.6811818 262 7 0.779366 243 7 0.6507593 147 7 0.7307240 293 7 0.7332313 132 5 0.683303 227 7 0.5867144 91 5 0.5483092 117 3 0.622165 283 6 0.582589 136 5 0.6693321 310 7 0.6437808 98 7 0.5271966 180 4 0.7073525 169 7 0.6750061 106 8 0.455639 77 3 0.6841258 335 7 0.7728449 130 5 0.722346 111 7 0.7314614 167 5 0.6935896 402 7 0.7061384 296 7 0.7620099 267 7 0.7637288 237 7 0.7498090 93 3 1.000000 36 2 0.4775510 29 3 0.7623815 204 7 0.5826616 209 7 0.7102371 184 6 0.6606134 200 3 0.7101810 180 3 0.6160000 157 3 0.6780944 215 5 0.6643867 0.481375 0.5201804 0.5871390 0.567223 0.5356075 0.469232 0.5066655 0.5415719 0.4841905 0.602634 0.412508 0.5228288 0.5204799 0.606658 0.5008316 0.3650850 0.5939168 0.416811 0.4761241 0.6072759 0.3533920 0.5709509 0.4951701 0.5353052 0.55298544 0.6454151 0.656070 0.6115048 0.5860616 0.4931175 0.5756515 0.6796495 0.5322424 0.8646807 0.3992917 0.7983520 0.4922039 0.4154546 0.4130397 0.4189305 0.4638169 0.464825 3 0.5821389 0.6364414 -0.02703132 7 0.6541888 0.6852852 -0.03109638 9.4227e-01 1.4215e-01 insignificant 1.00000 1.000000 insignificant 0.8331215 2.1615e-01 insignificant 1.00000 1.000000 insignificant -0.00718222 0.8206481 insignificant 1.00000 insignificant 0.5821389 0.6621287 -0.05498500 7 0.6541888 0.6639310 -0.00974220 4.6153e-02 0.0332169 weaklyHypometh 5.9939e-01 1 insignificant 7.1566e-01 0.4493296 insignificant 1.0000e+00 1.0000 insignificant -0.0564133 4.8217e-01 lowCoverage 1.0000e+00 lowCoverage 0.5829457 0.4294872 0.0779726 3 0.6905015 0.6822569 0.0082447 1.3718e-02 5.0618e-02 lowCoverage 4.8993e-01 1.0000000 lowCoverage 1.2134e-02 3.5176e-02 lowCoverage 6.3864e-01 1.0000000 lowCoverage -0.00874982 7.1775e-01 lowCoverage 1.0000000 lowCoverage 0.6364414 0.6621287 -2.7981e-02 7 0.6852852 0.6639310 0.0213542 1.3240e-01 0.429666 insignificant 1.0000e+00 1 insignificant 7.6418e-01 0.70474 insignificant 1.0000e+00 1 insignificant -0.04923106 5.4968e-01 lowCoverage 1.0000e+00 lowCoverage 0.6374622 0.4294872 0.10164164 3 0.7083532 0.6822569 0.02609633 3.0226e-02 1.2832e-01 lowCoverage 9.2774e-01 1.0000000 lowCoverage 1.8481e-02 0.0668079 lowCoverage 0.7700246 1 lowCoverage -0.00156760 0.9617942 lowCoverage 1.000000 lowCoverage 0.6620948 0.4294872 0.17538321 3 0.6635402 0.6822569 -0.0187166 1.8015e-02 1.4481e-03 lowCoverage 1.0000000 3.7131e-02 lowCoverage 0.11176403 4.2914e-02 lowCoverage 1.00000 8.4146e-01 lowCoverage 0.04766346 5.5155e-01 lowCoverage 1.000000 lowCoverage chr2 62537303 62538303 6739 ENSG00000209133 0.0219207 557 22 0.023420 388 23 0.0333565 534 23 0.0543158 326 16 0.037186 527 23 0.0637907 705 21 0.042315 569 23 0.067003 531 23 0.014452 651 23 0.0323315 753 23 0.034783 567 23 0.0504032 737 23 0.0464638 512 23 0.0025641 324 15 0.020272 691 23 0.0439645 409 23 0.0247203 359 16 0.035837 572 19 0.063038 372 23 0.0789020 597 23 0.0691040 204 18 0.0541796 279 12 0.0318167 489 23 0.0435287 269 20 0.057143 175 11 0.0217219 612 23 0.0431209 534 23 0.057333 293 20 0.0650207 381 23 0.0128972 586 23 0.0249684 704 23 0.0537283 677 23 0.0282672 384 23 0.0495779 503 23 0.089441 350 14 0.0222222 96 13 0.0319007 359 23 0.0260328 634 23 0.0460280 750 22 0.0159888 734 21 0.0000000 420 15 0.0295651 570 21 0.0551700 529 21 0.0154808 0.022650 0.0144819 0.0135495 0.024924 0.0367043 0.015175 0.0251313 0.0066504 0.0157636 0.019948 0.016641 0.0018846 0.0091624 0.013347 0.0230431 0.0100949 0.0215052 0.018479 0.0293610 0.0359718 0.0230309 0.0275580 0.0213141 0.0258787 0.01474489 0.0161347 0.010317 0.0211386 0.0076094 0.0142569 0.0199531 0.0068716 0.0055298 0.0659021 0.0261332 0.0271886 0.0076770 0.0312114 0.0134124 0.0000000 0.0237354 0.012229 14 0.0293346 0.0263310 0.00113385 23 0.0410783 0.0494534 -0.00837511 8.2556e-01 8.1200e-01 insignificant 1.00000 1.000000 insignificant 0.7659771 8.3559e-01 insignificant 1.00000 1.000000 insignificant -0.00499501 0.4684910 insignificant 1.00000 insignificant 0.0293401 0.0141997 0.01698458 23 0.0410783 0.0528098 -0.01173156 2.5909e-03 0.5925543 weaklyHypermeth 4.8885e-02 1 weaklyHypermeth 7.6814e-03 0.9502733 weaklyHypermeth 2.0761e-01 1.0000 insignificant -0.0016885 8.8516e-01 insignificant 1.0000e+00 insignificant 0.0294007 0.0179880 -0.0010827 21 0.0431101 0.0378567 0.0052534 3.1228e-01 5.5208e-01 insignificant 1.0000e+00 1.0000000 insignificant 2.3553e-01 9.5990e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.01020145 3.8636e-01 insignificant 1.0000000 insignificant 0.0263411 0.0137872 1.5017e-02 23 0.0512850 0.0424201 0.0088649 2.2093e-02 0.990208 weaklyHypermeth 3.0265e-01 1 insignificant 4.2258e-02 0.99044 weaklyHypermeth 7.2859e-01 1 insignificant 0.00330655 7.8375e-01 insignificant 1.0000e+00 insignificant 0.0263310 0.0180301 -0.00099042 21 0.0494534 0.0392087 0.01024466 5.4852e-01 5.2241e-01 insignificant 1.0000e+00 1.0000000 insignificant 3.1927e-01 0.9254739 insignificant 1.0000000 1 insignificant 0.01519647 0.2229349 insignificant 1.000000 insignificant 0.0137812 0.0180301 -0.01138423 21 0.0409051 0.0392087 0.0016963 9.3081e-01 7.2394e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.99507541 8.9929e-01 insignificant 1.00000 1.0000e+00 insignificant 0.01188991 4.3034e-01 insignificant 1.000000 insignificant chr2 64725103 64726103 6787 ENSG00000209305 0.0017361 568 8 0.000000 305 8 0.0078125 221 8 0.0016667 576 8 0.000000 167 8 0.0014881 763 8 0.000000 352 8 0.006250 185 8 0.000000 485 8 0.0054348 356 8 0.000000 287 8 0.0075758 252 8 0.0030488 340 8 0.0000000 141 8 0.000000 347 8 0.0056818 203 8 0.0039062 254 8 0.000000 716 8 0.000000 158 8 0.0036063 575 8 0.0096154 69 8 0.0026596 321 8 0.0043103 241 8 0.0059524 210 8 0.000000 245 8 0.0054835 415 8 0.0036765 312 8 0.000000 181 8 0.0078125 215 8 0.0039668 542 8 0.0053919 372 8 0.0024038 447 8 0.0000000 202 8 0.0131579 156 8 0.000000 96 6 0.0000000 116 8 0.0096154 123 8 0.0112522 262 8 0.0028910 712 8 0.0019841 492 8 0.0033854 696 8 0.0076049 522 8 0.0000000 488 8 0.0017767 0.000000 0.0070203 0.0017265 0.000000 0.0013372 0.000000 0.0056162 0.0000000 0.0059011 0.000000 0.007753 0.0031201 0.0000000 0.000000 0.0058148 0.0042414 0.0000000 0.000000 0.0034757 0.0086403 0.0023899 0.0038733 0.0053488 0.0000000 0.00522179 0.0033037 0.000000 0.0084828 0.0037906 0.0051954 0.0021001 0.0000000 0.0142869 0.0000000 0.0000000 0.0086403 0.0115614 0.0027752 0.0020553 0.0032209 0.0077083 0.000000 8 0.0019308 0.0039216 -0.00198993 8 0.0019302 0.0041796 -0.00224935 8.9927e-01 6.6438e-02 insignificant 1.00000 1.000000 insignificant 0.8682070 1.7612e-01 insignificant 1.00000 1.000000 insignificant -0.00186237 0.0850515 insignificant 1.00000 insignificant 0.0019308 0.0073298 -0.00534726 8 0.0019302 0.0071033 -0.00517305 9.8791e-01 0.0727349 insignificant 1.0000e+00 1 insignificant 9.4694e-01 0.8403327 insignificant 1.0000e+00 1.0000 insignificant -0.0032606 2.6801e-01 insignificant 1.0000e+00 insignificant 0.0019308 0.0030928 -0.0011565 8 0.0019302 0.0031168 -0.0011866 9.8665e-01 3.5236e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.9779e-01 1.4410e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.00076274 6.0442e-01 insignificant 1.0000000 insignificant 0.0039216 0.0073298 -3.0001e-03 8 0.0041796 0.0071033 -0.0029237 9.8777e-01 0.608525 insignificant 1.0000e+00 1 insignificant 8.8523e-01 0.97500 insignificant 1.0000e+00 1 insignificant -0.00139819 6.2367e-01 insignificant 1.0000e+00 insignificant 0.0039216 0.0030928 0.00081395 8 0.0041796 0.0031168 0.00106280 7.2762e-01 8.1357e-01 insignificant 1.0000e+00 1.0000000 insignificant 8.8009e-01 0.6113400 insignificant 1.0000000 1 insignificant 0.00109963 0.4844296 insignificant 1.000000 insignificant 0.0073298 0.0030928 0.00413806 8 0.0071033 0.0031168 0.0039865 8.0158e-01 9.8652e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.99961707 7.7146e-01 insignificant 1.00000 1.0000e+00 insignificant 0.00249782 4.1155e-01 insignificant 1.000000 insignificant chr2 64911703 64912703 6795 ENSG00000209316,ENSG00000223130 0.8147776 318 8 0.605497 229 8 0.4201248 150 7 0.8450487 271 8 0.392908 80 7 0.7659024 319 8 0.604651 99 7 0.661094 189 8 0.616641 136 7 0.6502946 97 7 0.727563 292 8 0.3625000 41 3 0.5094310 163 7 0.7642857 32 3 0.659309 72 7 0.7142857 59 5 0.3703704 28 2 0.703648 335 8 0.393959 168 7 0.7754772 285 8 0.7400794 63 4 0.7936944 71 6 0.7927208 121 7 0.7573696 70 3 0.654477 97 8 0.7272320 306 8 0.5956430 138 7 0.525253 42 2 0.6605036 174 6 0.8227847 284 8 0.8126498 295 7 0.6608487 395 8 0.5358631 243 8 0.6237167 177 4 0.796667 329 5 0.6250000 35 2 0.4559707 160 7 0.5997791 397 8 0.7738236 212 8 0.8933235 268 8 0.8643666 246 5 0.7192626 117 3 0.8697364 216 5 0.7469377 0.537837 0.3465280 0.7702236 0.312523 0.6493179 0.393725 0.5736246 0.4273066 0.4317294 0.596804 0.309500 0.3712581 0.5121582 0.474659 0.4500000 0.3963633 0.4871649 0.362879 0.6472361 0.6548810 0.7108288 0.6222612 0.6946825 0.5244658 0.54828156 0.4853871 0.328611 0.5635408 0.6666190 0.6850699 0.5257595 0.2774107 0.3181712 0.3042191 0.3000000 0.2294780 0.2941386 0.6975398 0.7953098 0.7694120 0.5716043 0.747672 3 0.6224338 0.6492937 -0.05136523 7 0.6131684 0.6509005 -0.03773210 9.9829e-01 1.3050e-01 insignificant 1.00000 1.000000 insignificant 0.9999618 5.9044e-03 weaklyHypometh 1.00000 0.656040 insignificant -0.09404959 0.0421098 weaklyHypometh 1.00000 insignificant 0.6224338 0.2970149 0.27749540 7 0.6131684 0.5203776 0.09279079 6.7917e-10 0.0090258 hypermethylated 3.3958e-08 1 hypermethylated 5.4824e-04 0.0073862 hypermethylated 2.3837e-02 1.0000 hypermethylated 0.0117223 8.4392e-01 insignificant 1.0000e+00 insignificant 0.6224338 0.7835539 -0.1568029 8 0.6131684 0.8137124 -0.2005440 1.0000e+00 1.1140e-07 weaklyHypometh 1.0000e+00 0.0001114 weaklyHypometh 1.0000e+00 3.5871e-06 weaklyHypometh 1.0000e+00 0.0035871 weaklyHypometh -0.20621417 7.5583e-04 hypomethylated 0.0629858 hypomethylated 0.6496350 0.2975391 3.3642e-01 7 0.6858104 0.5683398 0.1174706 3.1806e-13 0.018949 hypermethylated 2.6505e-11 1 hypermethylated 8.4133e-04 0.40386 hypermethylated 3.1160e-02 1 hypermethylated 0.10577194 8.1860e-02 insignificant 1.0000e+00 insignificant 0.6492937 0.7835539 -0.10280733 7 0.6509005 0.8137124 -0.16281189 9.9999e-01 8.7264e-06 weaklyHypometh 1.0000e+00 0.0087264 weaklyHypometh 9.9888e-01 0.0026509 weaklyHypometh 1.0000000 1 insignificant -0.11216458 0.0263985 weaklyHypometh 0.942803 insignificant 0.2970149 0.7835539 -0.54232063 7 0.5203776 0.8137124 -0.2933348 7.6843e-01 2.2130e-16 hypomethylated 1.0000000 3.6883e-14 hypomethylated 0.93044242 1.1333e-03 weaklyHypometh 1.00000 4.9274e-02 weaklyHypometh -0.21793652 4.4226e-03 weaklyHypometh 0.232770 insignificant chr2 64945803 64946803 6801 ENSG00000199964 0.1180319 1224 28 0.048749 764 32 0.0270355 1011 32 0.0508487 1068 23 0.015510 586 32 0.1094482 1207 31 0.026567 839 32 0.042194 686 30 0.049805 810 30 0.0300683 921 32 0.033308 958 32 0.0267523 840 32 0.0526950 939 32 0.0000000 82 7 0.024681 979 32 0.0200957 856 32 0.0191918 652 32 0.106994 1225 26 0.063908 669 30 0.1477347 952 29 0.0677075 440 30 0.0765681 852 23 0.0151707 717 32 0.0804283 586 33 0.042635 685 23 0.0028085 1160 32 0.0434657 838 32 0.050395 384 28 0.0186747 533 29 0.0451732 1152 32 0.0264938 1096 32 0.0614124 1278 28 0.0071652 545 32 0.0034198 649 30 0.033333 340 21 0.0185714 538 24 0.0758364 318 29 0.0038489 849 33 0.0590927 1737 24 0.0619179 1316 23 0.0654364 1136 23 0.0679904 1295 23 0.0088823 1535 30 0.0080229 0.016244 0.0108178 0.0089749 0.011012 0.0166246 0.011713 0.0151111 0.0054234 0.0048898 0.013044 0.014491 0.0055031 NA 0.015854 0.0259370 0.0231737 0.0096574 0.017169 0.0113729 0.0138853 0.0034071 0.0143088 0.0257692 0.0040935 0.00097577 0.0154401 0.032195 0.0174676 0.0099716 0.0010137 0.0110608 0.0106683 0.0029838 0.0086647 0.0022809 0.0781496 0.0072160 0.0028942 0.0076758 0.0084592 0.0073679 0.011491 23 0.0155254 0.0147195 0.00185317 32 0.0943841 0.0487280 0.04565617 1.7308e-01 9.9861e-01 insignificant 1.00000 1.000000 insignificant 0.1774156 9.9964e-01 insignificant 1.00000 1.000000 insignificant 0.00643648 0.5757706 insignificant 1.00000 insignificant 0.0154783 0.0133003 0.00382466 31 0.0954366 0.0343823 0.06105428 6.5608e-02 0.9943642 insignificant 8.3048e-01 1 insignificant 3.6971e-02 0.9999940 weaklyHypermeth 6.8466e-01 1.0000 insignificant 0.0269851 8.7032e-02 insignificant 1.0000e+00 insignificant 0.0154792 0.0069940 0.0041084 23 0.1049237 0.0527904 0.0521333 4.3757e-01 9.9996e-01 insignificant 1.0000e+00 1.0000000 insignificant 4.3183e-01 9.9962e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.00198304 8.9135e-01 insignificant 1.0000000 insignificant 0.0147529 0.0132757 1.9717e-03 31 0.0509429 0.0328195 0.0181234 6.6014e-01 0.998293 insignificant 1.0000e+00 1 insignificant 6.3379e-01 0.99990 insignificant 1.0000e+00 1 insignificant 0.02054858 1.6164e-01 insignificant 1.0000e+00 insignificant 0.0146241 0.0069850 0.00305201 23 0.0414816 0.0539380 -0.01245644 8.7182e-01 8.9502e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.4537e-01 0.9154450 insignificant 1.0000000 1 insignificant -0.00841952 0.5414018 insignificant 1.000000 insignificant 0.0132880 0.0069910 0.00382264 23 0.0335827 0.0577011 -0.0241184 9.9999e-01 9.9999e-01 insignificant 1.0000000 1.0000e+00 insignificant 1.00000000 9.9980e-01 insignificant 1.00000 1.0000e+00 insignificant -0.02896810 1.0189e-01 insignificant 1.000000 insignificant chr2 65030603 65031603 6806 ENSG00000209016 0.7966726 145 5 0.680034 90 5 0.6480727 75 5 0.7954762 144 5 0.782855 85 4 0.7662925 246 5 0.761596 97 5 0.737268 92 5 0.765361 103 5 0.8178571 102 5 0.768843 213 5 0.7216006 60 4 0.8388420 99 5 0.8225108 72 5 0.833038 123 5 0.7337255 73 4 0.9027106 77 4 0.755530 142 5 0.817355 114 5 0.8281661 208 5 0.7365657 45 5 0.7557276 66 5 0.7952778 110 5 0.7023058 79 5 0.851429 62 5 0.7356302 163 5 0.8364286 57 5 0.815952 44 5 0.8089286 92 5 0.7798851 124 5 0.8053928 117 5 0.7483820 280 5 0.6206349 87 5 0.7995895 87 5 0.663622 73 5 0.7250000 40 3 0.7195238 56 5 0.7909150 130 5 0.8942356 133 5 0.8217267 168 5 0.8564214 131 5 0.8085470 93 5 0.8483333 147 5 0.7512072 0.648036 0.6447113 0.7614087 0.764963 0.7286207 0.724264 0.7013476 0.7085108 0.7794785 0.747522 0.685655 0.8157047 0.8094757 0.805971 0.7309913 0.8846154 0.7210316 0.786420 0.7958462 0.7065176 0.7134288 0.7795690 0.6513506 0.8042328 0.68547638 0.8187264 0.792834 0.7725813 0.7488141 0.7724932 0.7124335 0.5655707 0.7556149 0.6619029 0.7023810 0.6760771 0.7516789 0.8701416 0.7768569 0.8248385 0.7631936 0.805423 4 0.7677966 0.7578692 0.01195196 5 0.7826474 0.7739493 0.00869814 2.8814e-01 6.3705e-01 insignificant 1.00000 1.000000 insignificant 0.7031528 6.7278e-01 insignificant 1.00000 1.000000 insignificant -0.00230176 0.9020629 lowCoverage 1.00000 lowCoverage 0.7677966 0.6955603 0.06372498 5 0.7826474 0.7164002 0.06624723 1.4975e-03 0.9855722 weaklyHypermeth 2.9363e-02 1 weaklyHypermeth 4.6045e-02 0.9572810 weaklyHypermeth 7.6741e-01 1.0000 insignificant 0.0588094 1.0183e-01 lowCoverage 1.0000e+00 lowCoverage 0.7677966 0.8139881 -0.0594114 5 0.7826474 0.8464455 -0.0637981 9.9039e-01 9.7807e-04 weaklyHypometh 1.0000e+00 0.1086745 insignificant 9.8430e-01 1.3253e-03 weaklyHypometh 1.0000e+00 0.1893355 insignificant -0.06716249 5.9273e-03 lowCoverage 0.2971083 lowCoverage 0.7578692 0.6955603 5.1160e-02 5 0.7739493 0.7164002 0.0575491 2.0239e-02 0.993410 weaklyHypermeth 2.8109e-01 1 insignificant 9.1810e-02 0.95295 insignificant 1.0000e+00 1 insignificant 0.06111116 9.1721e-02 lowCoverage 1.0000e+00 lowCoverage 0.7578692 0.8139881 -0.06937877 5 0.7739493 0.8464455 -0.07249626 9.9993e-01 4.8947e-04 weaklyHypometh 1.0000e+00 0.2043785 insignificant 9.9684e-01 0.0055420 weaklyHypometh 1.0000000 1 insignificant -0.06486073 0.0080873 weaklyHypometh 0.383318 insignificant 0.6955603 0.8139881 -0.11988949 5 0.7164002 0.8464455 -0.1300453 1.0000e+00 1.5953e-04 weaklyHypometh 1.0000000 5.5010e-03 weaklyHypometh 0.99999662 1.6537e-03 weaklyHypometh 1.00000 6.3604e-02 weaklyHypometh -0.12597189 5.1910e-03 lowCoverage 0.236854 lowCoverage chr2 65266703 65267703 6817 ENSG00000200654 0.4895927 275 8 0.537070 242 8 0.4306753 157 8 0.4633228 286 8 0.590081 149 8 0.4692655 480 10 0.632974 165 8 0.511769 211 8 0.627312 110 8 0.5580420 104 9 0.522098 380 8 0.5877976 63 8 0.5571661 158 8 0.5645000 95 8 0.485705 137 8 0.6987179 62 8 0.7500000 20 0 0.533135 263 9 0.442161 252 10 0.6109289 282 8 0.5011588 100 7 0.4841381 88 8 0.4873264 232 10 0.4494872 99 8 0.497608 89 6 0.5003121 267 9 0.5990947 110 6 0.481956 44 4 0.5482586 122 7 0.5357651 284 10 0.4385730 270 10 0.5366346 447 10 0.6375282 103 2 0.4625489 158 8 0.529953 110 7 0.4428571 55 7 0.4478327 181 10 0.4860802 271 10 0.4875973 449 8 0.4766436 373 10 0.4649237 190 8 0.4412653 243 8 0.5592506 315 8 0.6697265 0.585811 0.6274973 0.7024889 0.613574 0.6999345 0.635424 0.6875858 0.6796911 0.7430797 0.664477 0.619986 0.7438441 0.7489964 0.664246 0.7418305 0.8064516 0.7078168 0.670640 0.7070794 0.6142273 0.5584482 0.6424092 0.6016267 0.5920798 0.65933532 0.6120893 0.549881 0.6817914 0.7069298 0.6551006 0.6853993 0.6857260 0.5793592 0.6407923 0.5698925 0.6379678 0.6959178 0.7189205 0.7088020 0.7006341 0.6162495 0.746621 6 0.6926240 0.6463755 0.03104089 8 0.4925639 0.4820496 0.01051430 4.7897e-02 8.4416e-01 weaklyHypermeth 1.00000 1.000000 insignificant 0.0206486 4.6433e-01 weaklyHypermeth 1.00000 1.000000 insignificant 0.04808962 0.0418326 weaklyHypermeth 1.00000 insignificant 0.6926240 0.6662870 0.03553616 8 0.4925639 0.4494310 0.04313295 3.6177e-02 0.9233423 weaklyHypermeth 4.8887e-01 1 insignificant 2.0107e-01 0.9049828 insignificant 1.0000e+00 1.0000 insignificant 0.0519823 1.7657e-01 insignificant 1.0000e+00 insignificant 0.6926240 0.7757962 -0.0246119 8 0.4925639 0.4760221 0.0165419 3.8209e-01 2.5258e-01 insignificant 1.0000e+00 1.0000000 insignificant 2.5764e-01 3.1400e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.06717956 2.9551e-02 weaklyHypermeth 0.9532685 insignificant 0.6463755 0.6662870 4.0473e-03 8 0.4820496 0.4494310 0.0326187 4.7506e-01 0.775303 insignificant 1.0000e+00 1 insignificant 5.3769e-01 0.86499 insignificant 1.0000e+00 1 insignificant 0.00389266 9.0894e-01 insignificant 1.0000e+00 insignificant 0.6463755 0.7757962 -0.05404602 8 0.4820496 0.4760221 0.00602757 5.0702e-01 2.3574e-01 insignificant 1.0000e+00 1.0000000 insignificant 5.1968e-01 0.1909057 insignificant 1.0000000 1 insignificant 0.01908994 0.4439031 insignificant 1.000000 insignificant 0.6662870 0.7757962 -0.06072598 8 0.4494310 0.4760221 -0.0265911 4.2113e-01 1.7178e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.89658862 6.2941e-01 insignificant 1.00000 1.0000e+00 insignificant 0.01519728 6.8498e-01 insignificant 1.000000 insignificant chr2 65463303 65464303 6831 ACTR2 ENSG00000138071 0.8243981 343 10 0.575892 275 10 0.5881372 207 10 0.8069378 258 10 0.750612 116 9 0.8260858 376 10 0.824484 185 10 0.696072 313 10 0.680598 166 10 0.6853630 143 10 0.762812 471 10 0.6888700 89 7 0.5809104 225 10 0.7671958 47 5 0.618433 181 10 0.7061688 92 9 0.5507937 67 6 0.495778 182 5 0.638978 291 10 0.7905881 357 10 0.6190358 179 9 0.5479532 133 10 0.7796083 199 10 0.7545420 123 9 0.854958 60 4 0.7772607 304 10 0.5808495 196 9 0.732482 81 6 0.7006271 226 10 0.6237686 348 10 0.5559159 315 10 0.6566689 493 10 0.1670779 312 10 0.2011815 142 10 0.072727 236 4 0.2078134 65 6 0.1285297 199 10 0.0988290 351 10 0.8009454 220 7 0.5789929 296 10 0.8506904 212 10 0.7784122 276 7 0.5415394 238 7 0.8043614 0.537925 0.5781367 0.8089590 0.777553 0.8592863 0.850878 0.6924515 0.6654964 0.7371701 0.761298 0.708947 0.4292476 0.7328992 0.622583 0.6536906 0.6469289 0.4929659 0.600556 0.7841938 0.6732089 0.4951533 0.7555312 0.7648303 0.7244066 0.72774148 0.6125169 0.711670 0.7440398 0.5747005 0.5035926 0.7324821 0.1428628 0.1687528 0.0943666 0.2725457 0.1500286 0.0764093 0.7509071 0.5811904 0.8186273 0.7538275 0.507366 5 0.7246807 0.7049304 0.03594248 10 0.6930968 0.6743677 0.01872908 9.5737e-02 9.5774e-01 insignificant 1.00000 1.000000 insignificant 0.2916048 8.4576e-01 insignificant 1.00000 1.000000 insignificant 0.01098293 0.7662630 insignificant 1.00000 insignificant 0.7252571 0.1716475 0.56577010 10 0.7179621 0.1401060 0.57785610 6.4271e-61 1.0000000 hypermethylated 3.2136e-58 1 hypermethylated 9.6983e-23 1.0000000 hypermethylated 9.6983e-20 1.0000 hypermethylated 0.5469289 1.1346e-11 hypermethylated 2.8365e-09 hypermethylated 0.7252571 0.6376812 0.0322700 7 0.7179621 0.6863562 0.0316058 2.2843e-01 7.6545e-01 insignificant 1.0000e+00 1.0000000 insignificant 7.7738e-01 1.8246e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.01716071 8.0651e-01 insignificant 1.0000000 insignificant 0.7051282 0.1716475 5.4484e-01 10 0.6818045 0.1401060 0.5416986 1.2517e-50 1.000000 hypermethylated 1.2517e-47 1 hypermethylated 6.3388e-19 1.00000 hypermethylated 6.3388e-16 1 hypermethylated 0.53594594 1.4214e-10 hypermethylated 4.7380e-08 hypermethylated 0.7051282 0.6376812 -0.01048945 7 0.6818045 0.6863562 -0.00455171 7.7621e-01 3.4750e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.6787e-01 0.1088186 insignificant 1.0000000 1 insignificant -0.02814364 0.6973918 insignificant 1.000000 insignificant 0.1716475 0.6376812 -0.51970824 7 0.1401060 0.6863562 -0.5462503 1.0000e+00 6.7329e-27 hypomethylated 1.0000000 6.7329e-24 hypomethylated 1.00000000 4.0834e-13 hypomethylated 1.00000 4.0834e-10 hypomethylated -0.56408958 3.6113e-04 hypomethylated 0.040125 hypomethylated chr2 65626603 65627603 6845 ENSG00000222130 0.8483380 236 10 0.829001 108 10 0.6495020 110 7 0.8139240 162 8 0.802469 42 5 0.8427508 217 11 0.798595 70 7 0.812298 127 8 0.644805 76 6 0.8333333 68 7 0.861829 257 10 0.8029533 60 7 0.8664863 104 8 0.8853535 48 3 0.901892 97 7 0.7159091 33 2 0.8944444 37 3 0.904871 192 8 0.877720 146 7 0.7770529 157 11 0.6060606 29 2 0.7080574 56 5 0.8579311 117 8 0.6832792 69 7 0.884091 53 5 0.8389394 166 10 0.7361905 70 7 0.937500 11 0 0.7712838 110 7 0.8441939 155 10 0.8571576 124 10 0.8383339 256 11 0.5628908 101 8 0.6337510 70 7 0.681538 128 7 0.7461279 42 3 0.6538095 58 5 0.6735065 134 10 0.7479332 231 8 0.8466609 276 8 0.7836080 231 8 0.9113454 177 6 0.8212872 235 8 0.8679163 0.791273 0.7058598 0.8682831 0.746959 0.8572726 0.730223 0.8792208 0.7868439 0.8821510 0.829767 0.815457 0.8430367 0.8860162 0.905452 0.7007299 0.8345499 0.8349785 0.826004 0.8672141 0.8905109 0.6944896 0.8782189 0.7072471 0.8481752 0.85442417 0.8408675 0.885707 0.8416908 0.8774567 0.8512122 0.7929740 0.6441548 0.6886889 0.8555704 0.7374475 0.7298401 0.8147434 0.8546207 0.8817644 0.7728184 0.8874834 0.844442 2 0.8376651 0.8207237 0.01068860 8 0.8350751 0.8205050 0.01457008 1.1365e-01 5.6124e-01 insignificant 1.00000 1.000000 insignificant 0.3720914 6.2248e-01 insignificant 1.00000 1.000000 insignificant 0.02125825 0.5200659 insignificant 1.00000 insignificant 0.8376651 0.7354597 0.09510249 7 0.8350751 0.6827129 0.15236213 2.8454e-07 0.9999998 weaklyHypermeth 9.8117e-06 1 weaklyHypermeth 3.7687e-04 0.9999998 weaklyHypermeth 1.7946e-02 1.0000 weaklyHypermeth 0.1595725 3.0876e-04 weaklyHypermeth 2.0584e-02 weaklyHypermeth 0.8376651 0.8791304 -0.0058309 7 0.8350751 0.8195556 0.0155195 2.9945e-01 3.1429e-01 insignificant 1.0000e+00 1.0000000 insignificant 4.6890e-01 5.1272e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.00399048 9.0566e-01 insignificant 1.0000000 insignificant 0.8207237 0.7354597 8.5259e-02 7 0.8205050 0.6827129 0.1377921 8.0892e-04 0.999998 weaklyHypermeth 1.6509e-02 1 weaklyHypermeth 2.5931e-03 0.99992 weaklyHypermeth 8.1033e-02 1 weaklyHypermeth 0.13831420 2.0646e-03 weaklyHypermeth 1.0323e-01 insignificant 0.8207237 0.8791304 -0.01530625 7 0.8205050 0.8195556 0.00094938 7.6160e-01 3.8650e-01 insignificant 1.0000e+00 1.0000000 insignificant 8.1581e-01 0.6982478 insignificant 1.0000000 1 insignificant -0.02524873 0.5337247 insignificant 1.000000 insignificant 0.7354597 0.8791304 -0.09219141 6 0.6827129 0.8195556 -0.1368427 9.9983e-01 1.2129e-03 weaklyHypometh 1.0000000 3.2780e-02 weaklyHypometh 0.99988072 1.0388e-03 weaklyHypometh 1.00000 4.7219e-02 weaklyHypometh -0.16356293 1.9722e-03 weaklyHypometh 0.153049 insignificant chr2 65647503 65648503 6848 ENSG00000222130 0.6570789 259 9 0.668435 161 9 0.5849280 164 9 0.7456171 187 9 0.708152 94 9 0.7808120 291 9 0.636547 92 5 0.662244 171 9 0.540942 113 8 0.7173789 119 9 0.728054 300 9 0.7084524 62 5 0.7339424 131 9 0.6952381 31 4 0.783949 133 9 0.6368506 57 4 0.5015693 70 5 0.758077 112 9 0.678035 145 9 0.7366486 334 9 0.7663139 47 2 0.7435065 95 9 0.7755010 164 9 0.8202662 56 4 0.902930 79 5 0.6905421 220 9 0.6674603 70 4 0.777778 44 4 0.7729345 101 9 0.7706370 245 9 0.7033524 201 9 0.7862077 396 9 0.6133730 159 9 0.6328042 92 9 0.719664 269 9 0.7277778 79 5 0.6354719 105 7 0.6430427 252 9 0.7415058 240 9 0.8245811 232 9 0.7455353 135 9 0.6301390 170 5 0.7156337 254 9 0.7669450 0.720534 0.6317730 0.7620686 0.723989 0.7588079 0.673379 0.6108166 0.5832388 0.7597341 0.757384 0.712387 0.7203594 0.7081937 0.732971 0.7123149 0.6047625 0.7676765 0.697050 0.7169351 0.7073943 0.7407233 0.7735343 0.8050998 0.8869443 0.72479744 0.6801391 0.791152 0.7460536 0.7291940 0.7322688 0.7910254 0.6340390 0.6238683 0.6929090 0.7191358 0.6394102 0.6486527 0.7335517 0.8002849 0.7144353 0.6624168 0.722648 4 0.6740496 0.7159488 -0.04111401 9 0.6879592 0.8095004 -0.12154114 9.9950e-01 1.3017e-02 weaklyHypometh 1.00000 1.000000 insignificant 0.9998788 4.3804e-03 weaklyHypometh 1.00000 0.547552 insignificant -0.08163825 0.0025721 weaklyHypometh 0.64304 insignificant 0.6741946 0.6077406 0.03264852 9 0.7043160 0.6849645 0.01935149 4.0363e-02 0.8335714 weaklyHypermeth 5.3818e-01 1 insignificant 4.4636e-02 0.6717841 weaklyHypermeth 7.6329e-01 1.0000 insignificant 0.0211253 4.3296e-01 insignificant 1.0000e+00 insignificant 0.6741946 0.7119302 -0.0077635 9 0.7043160 0.7488936 -0.0445776 6.7704e-01 1.1387e-02 weaklyHypometh 1.0000e+00 0.7591204 insignificant 5.6182e-01 3.8377e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant -0.04833139 2.1797e-01 insignificant 1.0000000 insignificant 0.7149533 0.6077406 7.2111e-02 9 0.7460005 0.6849645 0.0610360 2.5557e-03 0.992702 weaklyHypermeth 4.4063e-02 1 weaklyHypermeth 4.0500e-04 0.98093 weaklyHypermeth 1.6200e-02 1 weaklyHypermeth 0.10276350 2.1817e-03 weaklyHypermeth 1.0389e-01 insignificant 0.7149533 0.7119302 0.03225890 9 0.7460005 0.7488936 -0.00289309 3.1808e-01 1.7612e-01 insignificant 1.0000e+00 1.0000000 insignificant 1.2397e-01 0.5275114 insignificant 1.0000000 1 insignificant 0.03330685 0.3862496 insignificant 1.000000 insignificant 0.6077406 0.7119302 -0.02740162 9 0.6849645 0.7488936 -0.0639291 8.3882e-01 1.4003e-03 weaklyHypometh 1.0000000 3.6849e-02 weaklyHypometh 0.68562913 1.9633e-02 weaklyHypometh 1.00000 4.5657e-01 insignificant -0.06945665 1.0291e-01 insignificant 1.000000 insignificant chr2 65654003 65655003 6849 ENSG00000222130 0.6078144 202 6 0.635135 88 4 0.6446797 98 6 0.7302041 139 6 0.852183 46 6 0.5535121 70 4 0.573016 43 3 0.720265 78 6 0.761304 51 6 0.6714286 26 3 0.803401 113 6 0.8055556 27 1 0.7638889 61 6 0.7580026 55 6 0.612795 37 3 0.6785714 23 3 1.0000000 2 0 0.680858 244 6 0.832675 64 5 0.5128968 60 5 0.7796296 27 2 1.0000000 3 0 0.7832977 144 6 0.7166667 27 5 0.737500 36 2 0.6434376 139 6 0.8402778 33 4 0.672222 24 2 0.7814815 78 6 0.7831527 159 6 0.6866688 206 6 0.7979911 77 5 0.7374699 79 6 0.7306349 74 6 0.699755 91 6 0.7857143 16 2 0.6295996 39 2 0.6239309 192 6 0.7093438 178 6 0.7712328 246 6 0.6429200 179 6 0.7425989 153 6 0.7653226 185 6 0.7031440 0.604433 0.6520080 0.6852846 0.871162 0.6214055 0.644110 0.6899571 0.7389971 0.7039474 0.717544 0.919956 0.7503655 0.7357195 0.629320 0.6945489 0.7443807 0.6829964 0.726656 0.7125104 0.6527778 0.9543334 0.7363711 0.6618421 0.6384134 0.76025939 0.8580044 0.652412 0.7649123 0.7343298 0.7420297 0.7925282 0.7365269 0.7252506 0.6300632 0.6515763 0.7392095 0.6959071 0.7353033 0.7645523 0.6790088 0.7484547 0.793877 0 0.6922069 0.7418678 -0.03538525 6 0.6493510 0.7872315 -0.13788049 9.9351e-01 5.4066e-02 insignificant 1.00000 1.000000 insignificant 0.9994823 1.4555e-01 insignificant 1.00000 1.000000 insignificant -0.05861784 0.1300189 lowCoverage 1.00000 lowCoverage 0.6924590 0.6843177 0.02701401 6 0.6680199 0.6369603 0.03105964 1.6261e-01 0.5788097 insignificant 1.0000e+00 1 insignificant 5.7835e-01 0.5776128 insignificant 1.0000e+00 1.0000 insignificant 0.0087252 8.1645e-01 lowCoverage 1.0000e+00 lowCoverage 0.6937831 0.7290117 -0.0399531 6 0.7164508 0.7377511 -0.0213003 8.7042e-01 5.5106e-02 insignificant 1.0000e+00 1.0000000 insignificant 7.2827e-01 8.5893e-02 insignificant 1.0000e+00 1.0000000 insignificant -0.01637433 6.4834e-01 lowCoverage 1.0000000 lowCoverage 0.7415966 0.6843177 6.0007e-02 6 0.7606355 0.6369603 0.1236752 1.1812e-02 0.977089 weaklyHypermeth 1.7630e-01 1 insignificant 2.5753e-01 0.97080 insignificant 1.0000e+00 1 insignificant 0.06734305 9.3902e-02 lowCoverage 1.0000e+00 lowCoverage 0.7420719 0.7290117 -0.00084808 6 0.7475139 0.7377511 0.00976286 3.2643e-01 4.1061e-01 insignificant 1.0000e+00 1.0000000 insignificant 1.0368e-01 0.7573116 insignificant 1.0000000 1 insignificant 0.04224352 0.2580159 lowCoverage 1.000000 lowCoverage 0.6872428 0.7290117 -0.05874279 6 0.6826137 0.7377511 -0.0551374 9.5855e-01 4.5057e-02 weaklyHypometh 1.0000000 6.6260e-01 insignificant 0.80957095 2.0971e-01 insignificant 1.00000 1.0000e+00 insignificant -0.02509953 4.9288e-01 lowCoverage 1.000000 lowCoverage chr2 67926703 67927703 6949 ETAA1 ENSG00000143971 0.2410534 154 6 0.175724 238 7 0.1119465 217 7 0.0851114 115 5 0.053333 60 5 0.2193857 243 7 0.089985 95 5 0.098449 235 5 0.076258 164 5 0.0983823 111 5 0.088619 112 5 0.1170279 92 5 0.0616527 165 5 0.1299145 88 5 0.093869 154 5 0.1000000 159 5 0.0800000 31 5 0.111583 128 6 0.073968 59 5 0.2077606 210 6 0.3083333 60 5 0.0177866 122 5 0.2152775 138 7 0.0940171 76 5 0.028571 46 5 0.1639512 295 7 0.0566667 85 5 0.247703 102 5 0.0611111 117 5 0.1608930 319 7 0.1435335 203 7 0.1750961 167 7 0.0155866 236 7 0.0666667 24 1 0.058408 580 7 0.0000000 16 0 0.0137529 146 5 0.0187500 244 7 0.0089286 188 5 0.0597070 91 7 0.0233957 104 5 0.0507937 60 2 0.0522648 108 5 0.1362718 0.115869 0.0500822 0.0850552 0.083747 0.1056328 0.082429 0.0946380 0.0711581 0.0972755 0.087157 0.108948 0.0588623 0.1264392 0.085668 0.0859504 0.1256198 0.0254635 0.069959 0.0909288 0.1822314 0.0152468 0.1310365 0.0969485 0.0448642 0.06383150 0.0608815 0.083950 0.0598026 0.0607392 0.0358988 0.1200476 0.0225096 0.0578512 0.0027769 0.0000000 0.0117754 0.0052944 0.0108471 0.0450307 0.0275556 0.0648301 0.047996 5 0.1070671 0.1315180 0.00162747 6 0.1543174 0.1760598 -0.02174236 6.1963e-01 8.1531e-02 insignificant 1.00000 1.000000 insignificant 0.5161081 5.3722e-01 insignificant 1.00000 1.000000 insignificant -0.02371050 0.4220974 insignificant 1.00000 insignificant 0.1070671 0.0192616 0.09600654 6 0.1543174 0.0285339 0.12578348 2.0487e-09 1.0000000 weaklyHypermeth 9.6316e-08 1 weaklyHypermeth 8.7268e-07 1.0000000 weaklyHypermeth 6.2334e-05 1.0000 weaklyHypermeth 0.0868404 4.9715e-05 lowCoverage 4.0178e-03 lowCoverage 0.1070671 0.0326679 0.0647877 5 0.1543174 0.0416063 0.1127111 2.4853e-06 1.0000e+00 weaklyHypermeth 3.1066e-04 1.0000000 weaklyHypermeth 5.4049e-05 1.0000e+00 weaklyHypermeth 7.7212e-03 1.0000000 weaklyHypermeth 0.07668324 1.1300e-04 lowCoverage 0.0141244 lowCoverage 0.1315180 0.0192616 1.1458e-01 7 0.1760598 0.0285339 0.1475258 6.1601e-11 1.000000 weaklyHypermeth 4.1068e-09 1 weaklyHypermeth 3.9576e-05 1.00000 weaklyHypermeth 2.3850e-03 1 weaklyHypermeth 0.11055095 1.5771e-03 lowCoverage 8.7618e-02 lowCoverage 0.1315180 0.0326679 0.05832613 5 0.1760598 0.0416063 0.13445350 7.4817e-10 9.9999e-01 weaklyHypermeth 3.7409e-07 1.0000000 weaklyHypermeth 8.0529e-04 0.9998954 weaklyHypermeth 0.0632734 1 weaklyHypermeth 0.10039375 0.0030776 lowCoverage 0.219832 lowCoverage 0.0192616 0.0326679 -0.02339976 5 0.0285339 0.0416063 -0.0130723 9.9716e-01 1.8934e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.98129500 2.9269e-01 insignificant 1.00000 1.0000e+00 insignificant -0.01015720 5.0691e-01 lowCoverage 1.000000 lowCoverage chr2 69258203 69259203 7024 ANTXR1 ENSG00000169604 0.135204 375 8 0.3083333 61 4 0.2500000 12 2 0.1518412 409 8 0.5833333 8 0 0.168494 265 8 0.2000000 19 2 0.6111111 25 2 0.5833333 9 0 0.3111111 19 2 0.4759091 60 4 0.500000 2 0 0.4166667 26 2 0.4807692 27 2 0.181818 23 2 0.000000 2 0 NA 0 0 0.1899548 365 8 0.338745 92 6 0.195789 171 8 0.5416667 14 2 0.58333333 12 2 0.154167 45 2 0.250000 4 0 0.382937 92 2 0.1540909 127 8 0.2554180 36 2 0.555556 7 0 0.5000000 6 0 0.1396190 99 8 0.3163690 80 8 0.091570 250 8 0.1199495 36 4 0.0196154 54 2 0.3181818 245 8 0.0000000 64 7 0.239583 22 2 0.0816667 148 8 0.2208795 354 8 0.1705739 232 8 0.1743133 299 8 0.2330238 266 6 0.367530 248 10 0.5000000 0.229167 0.2500000 0.5185185 0.666667 0.564815 0.2000000 0.4166667 0.3750000 0.3111111 0.4018182 0.500000 0.3750000 0.4807692 0.1818182 NA NA 0.3750000 0.750000 0.3268398 0.583333 0.58333333 0.354167 NA 0.5992063 0.3475000 0.2554180 0.333333 0.5000000 0.4600000 0.5520833 0.379326 0.0454545 0.0392308 0.7500000 0.00000000 0.062500 0.2416667 0.6465517 0.6626984 0.5756824 0.6666667 0.605343 0 0.1489578 0.261039 -0.01154827 2 0.2060247 0.168559 0.0374658 1.6858e-01 8.0980e-01 lowCoverage 1.000000 1.0000e+00 lowCoverage 0.23826527 9.0248e-01 lowCoverage 1.00000 1.000000 lowCoverage -0.00693347 0.917607 lowCoverage 1 lowCoverage 0.1489578 0.1038732 0.07538467 8 0.2060247 0.090063 0.1159622 7.0124e-04 1.0000e+00 weaklyHypermeth 9.3498e-03 1.0000e+00 weaklyHypermeth 2.1675e-03 1.0000e+00 weaklyHypermeth 4.3349e-02 1.0000e+00 weaklyHypermeth 0.19029425 1.3314e-02 lowCoverage 2.9586e-01 lowCoverage 0.1486762 0.230164 -0.11867808 8 0.1932939 0.288900 -0.09560655 9.9999e-01 1.3436e-10 weaklyHypometh 1.0000e+00 1.3436e-07 weaklyHypometh 9.9409e-01 3.2786e-07 weaklyHypometh 1.0000e+00 0.00032786 weaklyHypometh 0.08686296 1.3051e-01 lowCoverage 1.0000000 lowCoverage 0.261039 0.1038732 1.1728e-01 2 0.168559 0.090063 0.0784963 8.6780e-02 1.0000e+00 lowCoverage 7.6796e-01 1.0000000 lowCoverage 4.1166e-02 0.99987980 lowCoverage 4.7318e-01 1.00000 lowCoverage 0.1972277 1.7435e-02 lowCoverage 3.2347e-01 lowCoverage 0.261378 0.230164 -0.12783629 2 0.1854148 0.288900 -0.10348564 9.9997e-01 5.7979e-10 lowCoverage 1.0000e+00 5.7979e-07 lowCoverage 9.9589e-01 4.5515e-06 lowCoverage 1.0000e+00 0.0045515 lowCoverage 0.09379642 0.15885233 lowCoverage 1.00000 lowCoverage 0.1068841 0.230164 -0.2078716 8 0.099069 0.288900 -0.1898316 1.0000e+00 1.1361e-09 hypomethylated 1.0000e+00 8.7395e-08 hypomethylated 9.9996e-01 2.2460e-06 hypomethylated 1.0000e+00 5.6149e-04 hypomethylated -0.1034313 1.3440e-01 insignificant 1.0000000 insignificant chr2 69387003 69388003 7031 ANTXR1 ENSG00000169604 0.048718 1468 34 0.0570643 1890 37 0.0873411 2076 37 0.0365458 1272 34 0.0445172 1116 34 0.072561 2050 37 0.0154147 1395 34 0.0512027 1564 33 0.0477642 1819 33 0.0309121 2076 34 0.0750823 1384 34 0.014487 1467 34 0.0602508 1306 33 0.0329180 906 22 0.043472 2056 34 0.016768 1523 34 0.0639137 865 21 0.0791996 1496 37 0.023710 1262 34 0.104014 1505 37 0.0462263 558 33 0.06271697 960 33 0.055279 1077 34 0.014309 1055 33 0.043096 629 33 0.0647947 2184 37 0.0727032 1635 33 0.112043 1116 30 0.0295606 1167 34 0.0791075 2442 37 0.0642921 1889 37 0.103217 1708 37 0.0542050 1359 37 0.0143862 769 34 0.1221276 883 32 0.0136752 334 24 0.042309 927 30 0.0926061 1681 37 0.0365700 2129 34 0.0614559 1664 34 0.0073237 1463 31 0.0308438 1373 37 0.017087 1784 34 0.0357403 0.017470 0.0428130 0.0224723 0.014049 0.025975 0.0190285 0.0135082 0.0199436 0.0181825 0.0246393 0.018990 0.0106993 0.0325220 0.0185853 0.020155 0.0699896 0.0181497 0.027458 0.0272732 0.059209 0.01614656 0.053939 0.0190078 0.0171879 0.0298589 0.0233416 0.022688 0.0200792 0.0183483 0.0320040 0.033153 0.0135874 0.0075613 0.0449915 0.01556008 0.031296 0.0279487 0.0360110 0.0238056 0.0099465 0.0267437 0.019635 30 0.0264625 0.034044 -0.00307285 37 0.0966556 0.109989 -0.0133332 2.9028e-01 4.3287e-01 insignificant 1.000000 1.0000e+00 insignificant 0.29338016 6.1056e-01 insignificant 1.00000 1.000000 insignificant -0.01198595 0.235256 insignificant 1 insignificant 0.0264712 0.0349521 0.00164459 37 0.1048816 0.070695 0.0341863 1.5612e-02 9.6831e-01 weaklyHypermeth 1.6434e-01 1.0000e+00 insignificant 1.0622e-02 9.9687e-01 weaklyHypermeth 1.6046e-01 1.0000e+00 insignificant -0.00625864 7.4768e-01 insignificant 1.0000e+00 insignificant 0.0257901 0.020687 -0.00049280 34 0.0530230 0.053656 -0.00063280 1.3512e-01 3.4232e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.2343e-01 4.4493e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.01963681 1.1058e-01 insignificant 1.0000000 insignificant 0.033953 0.0349521 5.1796e-03 37 0.108002 0.070695 0.0373067 1.0534e-01 9.6057e-01 insignificant 8.8519e-01 1.0000000 insignificant 1.1016e-01 0.99703338 insignificant 1.0000e+00 1.00000 insignificant 0.0057273 7.7706e-01 insignificant 1.0000e+00 insignificant 0.032952 0.020687 0.00542534 34 0.0618210 0.053656 0.00816516 3.6931e-01 2.9887e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.9634e-01 5.7167e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.03162276 0.02714307 weaklyHypermeth 1.00000 insignificant 0.0340354 0.020687 -0.0021634 34 0.059556 0.053656 0.0059001 9.6418e-01 1.0793e-01 insignificant 1.0000e+00 9.7233e-01 insignificant 9.9107e-01 1.3580e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0258955 2.3417e-01 insignificant 1.0000000 insignificant chr2 69755103 69756103 7044 ENSG00000208965 0.807828 248 8 0.6436692 201 8 0.5000969 97 8 0.7843287 177 8 0.5892857 54 6 0.785598 319 8 0.6089286 80 4 0.8554705 181 8 0.7609366 117 7 0.6153333 73 8 0.7855294 291 8 0.516560 57 3 0.6389992 131 7 0.7222222 70 6 0.674753 126 8 0.482913 69 7 0.9216117 41 3 0.8230756 166 8 0.850170 194 8 0.805026 214 8 0.8288889 66 4 0.82287199 108 8 0.680034 144 8 0.732094 75 8 0.777701 74 8 0.6988350 250 8 0.6838082 141 8 0.638889 53 5 0.8154455 111 7 0.7208606 233 8 0.7960733 238 8 0.778300 349 8 0.6539186 126 8 0.6393689 98 8 0.5472397 185 8 0.7177350 39 3 0.692566 101 8 0.6922337 242 8 0.7955540 165 8 0.8098695 214 8 0.7946393 200 8 0.7821314 131 8 0.729791 213 8 0.8015474 0.742585 0.6024221 0.7952882 0.699555 0.782587 0.6658143 0.8575201 0.7607436 0.6668223 0.7991292 0.545346 0.8259306 0.7660986 0.7391307 0.533130 0.8502305 0.8428356 0.862902 0.7881355 0.767445 0.82287528 0.757479 0.7847772 0.8330554 0.8371399 0.7444444 0.760484 0.7813338 0.7788611 0.7937323 0.787837 0.6849814 0.7147318 0.6582974 0.74211600 0.781017 0.7189137 0.8141437 0.8200862 0.7847265 0.8349222 0.753978 4 0.7752925 0.786645 -0.01976072 8 0.7184928 0.712481 0.0060118 9.0480e-01 3.2586e-01 insignificant 1.000000 1.0000e+00 insignificant 0.99567810 1.2463e-01 insignificant 1.00000 1.000000 insignificant -0.03920013 0.260353 insignificant 1 insignificant 0.7752925 0.7029077 0.06990423 8 0.7184928 0.618543 0.0999501 1.0629e-04 9.9367e-01 weaklyHypermeth 1.6608e-03 1.0000e+00 weaklyHypermeth 3.3348e-02 9.2548e-01 weaklyHypermeth 4.2420e-01 1.0000e+00 insignificant 0.05143969 1.9229e-01 insignificant 1.0000e+00 insignificant 0.7761297 0.816901 -0.03226158 8 0.7507063 0.801226 -0.05051955 9.5035e-01 1.2680e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9312e-01 3.7588e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant -0.07378036 3.0129e-02 weaklyHypometh 0.9177124 insignificant 0.786645 0.7029077 8.7954e-02 8 0.712481 0.618543 0.0939383 4.6971e-07 9.9150e-01 weaklyHypermeth 1.1456e-05 1.0000000 weaklyHypermeth 3.6567e-04 0.99078263 weaklyHypermeth 9.3761e-03 1.00000 weaklyHypermeth 0.0906398 1.4318e-02 weaklyHypermeth 2.9811e-01 insignificant 0.788871 0.816901 -0.01258699 8 0.7546085 0.801226 -0.04661736 8.0619e-01 3.8417e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.1158e-01 4.7065e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.03458023 0.15553707 insignificant 1.00000 insignificant 0.7052097 0.816901 -0.1002415 8 0.659492 0.801226 -0.1417340 9.8981e-01 6.5373e-06 weaklyHypometh 1.0000e+00 1.9227e-04 weaklyHypometh 9.7720e-01 5.0094e-04 weaklyHypometh 1.0000e+00 2.0038e-02 weaklyHypometh -0.1252201 2.5457e-03 weaklyHypometh 0.0979115 weaklyHypometh chr2 69942503 69943503 7055 GMCL1 ENSG00000087338 0.648977 204 5 0.6124074 94 5 0.3742690 77 5 0.6205339 133 5 0.6286096 67 4 0.647584 48 3 0.6369792 110 3 0.6352080 91 5 0.4296296 73 4 0.6275412 100 5 0.6048164 171 5 0.490476 66 5 0.5794442 110 5 0.5873810 36 5 0.520217 103 3 0.746784 52 3 0.4871658 62 3 0.6131449 148 5 0.635149 112 5 0.611111 52 3 0.5184933 57 5 0.62727273 53 5 0.644513 138 5 0.561569 51 5 0.638645 87 5 0.7177193 135 5 0.4349206 29 4 0.668571 38 5 0.5257666 78 5 0.5849182 124 5 0.6528788 148 5 0.580882 50 3 0.6600000 89 5 0.6127957 94 5 0.4864635 57 5 0.8600000 25 3 0.546667 73 5 0.5941711 124 5 0.6838861 220 5 0.6863141 195 5 0.5936170 151 5 0.6219465 178 5 0.645512 140 5 0.6756866 0.532669 0.4929539 0.6703546 0.664555 0.700436 0.6726050 0.6263807 0.5608897 0.6902423 0.6728935 0.545807 0.6108423 0.5850932 0.6536166 0.729961 0.5010027 0.6456225 0.658606 0.6440217 0.573492 0.68297101 0.662349 0.6203112 0.6643176 0.7425756 0.4622153 0.681522 0.5677545 0.6310033 0.6545208 0.627637 0.6757764 0.6808088 0.4842332 0.80692935 0.583967 0.6288894 0.6888582 0.7195936 0.6468644 0.6713616 0.670627 3 0.6293963 0.646761 -0.01734001 5 0.6010846 0.622211 -0.0211268 6.5276e-01 1.7442e-01 insignificant 1.000000 1.0000e+00 insignificant 0.56998162 4.8070e-01 insignificant 1.00000 1.000000 insignificant -0.00947436 0.751676 lowCoverage 1 lowCoverage 0.6293963 0.6493506 0.00179956 5 0.6010846 0.605589 -0.0045041 5.9977e-01 5.1448e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.9535e-01 4.3927e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03981140 5.0197e-01 lowCoverage 1.0000e+00 lowCoverage 0.6293963 0.677602 -0.04359386 5 0.6010846 0.651589 -0.05050472 9.8647e-01 9.9992e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9805e-01 3.5854e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant -0.05938377 3.9519e-02 lowCoverage 0.9372399 lowCoverage 0.646761 0.6493506 1.4874e-02 5 0.622211 0.605589 0.0166227 1.6018e-01 4.9504e-01 insignificant 1.0000e+00 1.0000000 insignificant 6.0154e-01 0.32639816 insignificant 1.0000e+00 1.00000 insignificant -0.0303370 6.1233e-01 lowCoverage 1.0000e+00 lowCoverage 0.646761 0.677602 -0.02788880 5 0.6222114 0.651589 -0.02937794 9.5847e-01 2.1428e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9513e-01 9.0310e-02 insignificant 1.0000e+00 1.0000000 insignificant -0.04990942 0.10442329 lowCoverage 1.00000 lowCoverage 0.6493506 0.677602 -0.0447360 5 0.605589 0.651589 -0.0460006 9.3302e-01 5.9245e-02 insignificant 1.0000e+00 5.8083e-01 insignificant 8.6889e-01 2.3324e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0195724 7.3621e-01 lowCoverage 1.0000000 lowCoverage chr2 70078403 70079403 7066 ENSG00000179818 0.772331 353 12 0.6688640 297 11 0.6212937 204 11 0.7777073 390 12 0.7396825 146 11 0.755434 423 12 0.7980283 208 9 0.6976942 244 10 0.7122281 139 10 0.8634688 118 8 0.7623554 543 11 0.618316 78 6 0.8092000 148 11 0.8375000 49 7 0.693896 157 8 0.710775 100 5 0.7383133 194 8 0.6859745 286 12 0.709105 309 11 0.764442 382 12 0.8016529 55 6 0.69035813 61 7 0.749933 273 12 0.690070 101 9 0.808712 173 9 0.7250223 398 11 0.6619870 125 9 0.686295 81 7 0.8334239 178 11 0.7864496 396 11 0.7149231 378 11 0.802352 445 12 0.7020790 209 10 0.7299314 216 11 0.7979003 170 9 0.7420287 179 7 0.506980 188 11 0.6313895 402 12 0.7473074 420 12 0.7899733 433 12 0.7354529 489 12 0.8331942 360 11 0.793621 453 12 0.8394015 0.770536 0.7266389 0.8468399 0.837989 0.804211 0.8164261 0.8156913 0.7994390 0.8946267 0.8353114 0.737714 0.8097312 0.8450371 0.7799981 0.827931 0.8834898 0.7676717 0.815641 0.8361724 0.845158 0.77334322 0.805398 0.7611385 0.8310460 0.8238423 0.7343801 0.777608 0.8722893 0.8249065 0.8140248 0.826491 0.7569831 0.7874165 0.8179977 0.80924099 0.680208 0.7594041 0.8365616 0.8486066 0.8197557 0.8752173 0.863559 5 0.7877517 0.799174 0.00227452 11 0.7293869 0.758640 -0.0292535 6.4479e-01 5.5836e-01 insignificant 1.000000 1.0000e+00 insignificant 0.88040879 5.2726e-01 insignificant 1.00000 1.000000 insignificant -0.00910115 0.686311 insignificant 1 insignificant 0.7877705 0.7690616 0.03326406 12 0.7233052 0.613362 0.1099432 4.4849e-03 8.9573e-01 weaklyHypermeth 5.0392e-02 1.0000e+00 weaklyHypermeth 3.1505e-02 9.4419e-01 weaklyHypermeth 4.0916e-01 1.0000e+00 insignificant 0.05177894 2.8631e-01 insignificant 1.0000e+00 insignificant 0.7890740 0.826914 -0.03210939 12 0.7634290 0.793006 -0.02957740 9.9969e-01 2.9813e-02 weaklyHypometh 1.0000e+00 8.7090e-01 insignificant 9.9981e-01 5.0746e-02 insignificant 1.0000e+00 1.00000000 insignificant -0.04307935 8.6949e-02 insignificant 1.0000000 insignificant 0.799398 0.7690616 2.9731e-02 11 0.759792 0.613362 0.1464305 2.6007e-02 9.4478e-01 weaklyHypermeth 2.6811e-01 1.0000000 insignificant 8.4116e-02 0.96559556 insignificant 8.6113e-01 1.00000 insignificant 0.0608801 2.2249e-01 insignificant 1.0000e+00 insignificant 0.799623 0.826914 -0.03353462 11 0.7612990 0.793006 -0.03170740 9.9060e-01 3.4781e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.8532e-01 8.0718e-02 insignificant 1.0000e+00 1.0000000 insignificant -0.03397820 0.19017438 insignificant 1.00000 insignificant 0.7698529 0.826914 -0.0635025 12 0.656443 0.793006 -0.1365631 9.9979e-01 1.2187e-03 weaklyHypometh 1.0000e+00 1.7662e-02 weaklyHypometh 9.9862e-01 4.7988e-03 weaklyHypometh 1.0000e+00 8.8867e-02 weaklyHypometh -0.0948583 7.7688e-02 insignificant 0.9474092 insignificant chr2 70114603 70115603 7071 ENSG00000179818 0.888119 222 7 0.7273611 95 6 0.7078255 128 7 0.9188492 133 7 0.8730159 41 4 0.799656 289 7 0.8654205 138 7 0.8491592 108 7 0.8682035 90 7 0.6975793 104 6 0.7533421 213 7 0.897254 57 6 0.8598771 130 7 0.9428105 35 2 0.910617 119 7 0.681463 78 7 0.7934806 121 6 0.8600007 166 7 0.752817 152 7 0.826747 267 7 0.8171769 61 7 0.83662132 81 5 0.799879 157 7 0.759319 67 7 0.852183 61 7 0.8660450 113 5 0.7495748 86 5 0.732426 56 7 0.6998299 115 7 0.8405440 169 7 0.8447936 158 7 0.772275 432 7 0.6852116 109 7 0.7837044 84 7 0.7572436 163 7 0.7814574 113 6 0.770147 69 5 0.6554684 139 7 0.9032835 213 7 0.7889244 258 7 0.7557276 210 7 0.8517074 161 7 0.894087 256 7 0.8950815 0.741511 0.6692777 0.9412313 0.861940 0.850733 0.8786433 0.8508984 0.8681682 0.8557466 0.8524895 0.853630 0.8783499 0.8675975 0.9128034 0.722615 0.7916230 0.8666313 0.863045 0.8128658 0.850680 0.82846186 0.823900 0.7873474 0.9648188 0.8746948 0.7988073 0.769012 0.7037238 0.8197578 0.8550482 0.834984 0.7956162 0.7796206 0.7734462 0.79291799 0.734261 0.7333096 0.9095686 0.8940913 0.8630266 0.8525400 0.895693 5 0.8395383 0.820694 0.01889642 7 0.7836690 0.747974 0.0356954 1.5953e-02 5.0315e-01 weaklyHypermeth 1.000000 1.0000e+00 insignificant 0.15782679 4.4488e-01 insignificant 1.00000 1.000000 insignificant 0.02612423 0.277492 insignificant 1 insignificant 0.8395383 0.7533235 0.07646649 7 0.7836690 0.715211 0.0684580 9.9834e-04 9.9990e-01 weaklyHypermeth 1.2965e-02 1.0000e+00 weaklyHypermeth 8.3493e-03 9.9565e-01 weaklyHypermeth 1.3253e-01 1.0000e+00 insignificant 0.08480783 1.1635e-02 weaklyHypermeth 2.7059e-01 insignificant 0.8395383 0.888889 -0.04375407 7 0.7836690 0.773238 0.01043079 9.7531e-01 2.8116e-02 weaklyHypometh 1.0000e+00 8.6314e-01 insignificant 9.5185e-01 7.1406e-02 insignificant 1.0000e+00 1.00000000 insignificant -0.01506609 6.7022e-01 insignificant 1.0000000 insignificant 0.820694 0.7533235 6.0430e-02 7 0.747974 0.715211 0.0327626 2.3128e-03 9.1599e-01 weaklyHypermeth 2.9276e-02 1.0000000 weaklyHypermeth 6.8428e-02 0.94614976 insignificant 7.5196e-01 1.00000 insignificant 0.0586836 5.6587e-02 insignificant 7.4457e-01 insignificant 0.820694 0.888889 -0.06246516 7 0.7479735 0.773238 -0.02526464 9.6800e-01 1.3935e-03 weaklyHypometh 1.0000e+00 3.4838e-01 insignificant 9.4289e-01 2.9144e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant -0.04119032 0.25362853 insignificant 1.00000 insignificant 0.7533235 0.888889 -0.1170358 7 0.715211 0.773238 -0.0580272 9.8312e-01 4.8840e-05 weaklyHypometh 1.0000e+00 1.1100e-03 weaklyHypometh 9.9344e-01 1.3199e-03 weaklyHypometh 1.0000e+00 3.5673e-02 weaklyHypometh -0.0998739 2.6024e-02 weaklyHypometh 0.4263721 insignificant chr2 70825003 70826003 7105 ADD2 ENSG00000075340 0.790985 450 12 0.7035277 239 12 0.7337783 107 11 0.7724754 273 12 0.8319444 73 5 0.769978 487 12 0.6122778 152 10 0.7041870 151 11 0.7517774 110 9 0.6432383 89 10 0.7794544 414 12 0.676046 89 6 0.7490397 151 11 0.7529762 39 6 0.806502 173 7 0.580510 67 6 0.7159091 49 4 0.7374737 238 12 0.673480 165 11 0.843135 297 12 0.6521429 66 5 0.76487956 93 9 0.747888 217 12 0.647833 96 11 0.897403 66 7 0.7275267 282 12 0.6825005 110 7 0.710985 53 4 0.7330747 150 11 0.8094561 282 12 0.7845195 330 12 0.792627 481 12 0.6964080 191 11 0.7088509 145 9 0.7740560 417 12 0.6943768 75 6 0.558736 124 8 0.7859760 263 12 0.7324714 293 12 0.7855500 380 12 0.7200813 342 12 0.7489364 242 7 0.747328 298 12 0.7822145 0.692488 0.8066180 0.8135660 0.823791 0.790112 0.6597614 0.7555765 0.7754061 0.7892664 0.8078097 0.740475 0.8021573 0.7157020 0.8358268 0.717311 0.7689846 0.8317145 0.793653 0.8143538 0.751204 0.86504861 0.775598 0.7603447 0.8857942 0.7762208 0.7855678 0.788095 0.8277729 0.8118506 0.8097801 0.803271 0.6163607 0.6340136 0.7618836 0.69394427 0.664375 0.7740339 0.8370929 0.8180355 0.7638915 0.7904695 0.870033 4 0.7712487 0.781671 -0.00243620 11 0.7147735 0.723729 -0.0089553 4.6888e-01 3.6965e-01 insignificant 1.000000 1.0000e+00 insignificant 0.51760482 2.3981e-01 insignificant 1.00000 1.000000 insignificant -0.01446817 0.578382 insignificant 1 insignificant 0.7714736 0.7695473 0.03445227 11 0.7224251 0.788102 -0.0656765 3.1269e-02 5.2033e-01 weaklyHypermeth 3.0358e-01 1.0000e+00 insignificant 7.5540e-03 7.8942e-01 weaklyHypermeth 1.2384e-01 1.0000e+00 insignificant 0.02836752 4.6214e-01 insignificant 1.0000e+00 insignificant 0.7720685 0.790354 -0.01911078 11 0.7470290 0.747610 -0.00058069 6.1417e-01 1.4780e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.2635e-01 2.0068e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.01543878 4.2681e-01 insignificant 1.0000000 insignificant 0.781924 0.7695473 3.6666e-02 11 0.738644 0.788102 -0.0494575 6.4876e-03 3.1478e-01 weaklyHypermeth 7.6325e-02 1.0000000 weaklyHypermeth 7.5399e-04 0.67814119 weaklyHypermeth 1.6042e-02 1.00000 weaklyHypermeth 0.0428357 2.9977e-01 insignificant 1.0000e+00 insignificant 0.782491 0.790354 -0.01125741 11 0.7548458 0.747610 0.00723614 2.6050e-01 1.9879e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.7087e-01 6.1271e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.00097061 0.96721794 insignificant 1.00000 insignificant 0.7687861 0.790354 -0.0389858 12 0.755502 0.747610 0.0078922 6.1810e-01 2.2785e-03 weaklyHypometh 1.0000e+00 3.2092e-02 weaklyHypometh 9.1604e-01 3.1644e-03 weaklyHypometh 1.0000e+00 6.5924e-02 weaklyHypometh -0.0438063 2.5552e-01 insignificant 1.0000000 insignificant chr2 71080703 71081703 7110 TEX261 ENSG00000144043 0.765470 199 6 0.7713399 409 6 0.6356768 96 6 0.7708245 165 6 0.6979718 95 4 0.612021 357 6 0.7305861 158 6 0.8844617 213 6 0.8234771 155 6 0.8888889 65 6 0.6664843 372 6 0.760958 50 2 0.8920749 105 6 0.8535958 119 4 0.560590 153 6 0.851938 74 6 0.0000000 1 0 0.8825764 165 6 0.728356 341 6 0.774107 253 6 0.6799062 83 6 0.86721612 65 4 0.709368 158 6 0.710213 136 4 0.727020 46 4 0.8811138 340 6 0.6230062 167 6 0.559359 70 4 0.6884871 301 6 0.6436610 362 6 0.7884227 313 6 0.753742 334 8 0.5386707 233 6 0.5389724 59 6 0.5689689 246 4 0.6500000 14 1 0.695588 220 6 0.6653938 357 6 0.8514538 192 4 0.8746665 171 6 0.8195658 126 6 0.5984387 104 4 0.577078 132 6 0.7966638 0.721792 0.7171401 0.8079098 0.701069 0.827317 0.7122043 0.7869218 0.7448214 0.7881356 0.7759897 0.637093 0.7043708 0.7715219 0.7297184 0.794541 NA 0.8077275 0.721945 0.7740926 0.849816 0.75975508 0.780153 0.7222796 0.6898819 0.7640678 0.5835217 0.763150 0.8098881 0.7404012 0.7587572 0.839051 0.5023752 0.4056933 0.2810489 0.44223799 0.530794 0.5165448 0.7913512 0.7793905 0.7485806 0.8064423 0.794936 4 0.7382228 0.746526 -0.00163173 6 0.6941112 0.734173 -0.0400615 4.2452e-01 4.6160e-01 insignificant 1.000000 1.0000e+00 insignificant 0.47653222 6.3114e-01 insignificant 1.00000 1.000000 insignificant 0.00827685 0.873854 insignificant 1 insignificant 0.7382228 0.4543844 0.29596921 6 0.6941112 0.595577 0.0985347 6.6507e-14 9.0289e-01 hypermethylated 2.4632e-12 1.0000e+00 hypermethylated 1.5300e-05 9.4409e-01 hypermethylated 5.4643e-04 1.0000e+00 hypermethylated 0.11797093 3.3625e-02 lowCoverage 5.5123e-01 lowCoverage 0.7382228 0.722759 -0.01502944 6 0.6941112 0.643236 0.05087475 1.6244e-01 3.1847e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.4444e-01 3.8762e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.01667076 8.3621e-01 insignificant 1.0000000 insignificant 0.746526 0.4543844 2.9769e-01 6 0.734173 0.595577 0.1385962 7.6717e-10 9.8036e-01 hypermethylated 2.4747e-08 1.0000000 hypermethylated 9.8879e-05 0.99596891 hypermethylated 3.1897e-03 1.00000 hypermethylated 0.1096941 1.4608e-02 lowCoverage 2.9811e-01 lowCoverage 0.746526 0.722759 -0.01244291 6 0.7341728 0.643236 0.09093627 3.6048e-01 5.2966e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.5744e-01 6.3416e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.02494761 0.73503286 insignificant 1.00000 insignificant 0.4543844 0.722759 -0.3256734 6 0.595577 0.643236 -0.0476600 8.4469e-01 6.4777e-06 hypomethylated 1.0000e+00 1.9227e-04 hypomethylated 9.4368e-01 2.0412e-03 weaklyHypometh 1.0000e+00 4.9785e-02 weaklyHypometh -0.1346417 1.0885e-01 lowCoverage 1.0000000 lowCoverage chr2 71865403 71866403 7119 DYSF ENSG00000135636 0.878056 69 5 0.7295635 92 5 0.3498888 100 5 0.9105128 95 5 0.5779221 38 4 0.898731 169 5 0.3980952 27 3 0.8197273 162 5 0.6714325 77 5 0.7614734 86 5 0.7626812 114 5 0.933333 18 2 0.6391347 137 5 0.8358586 71 5 0.735376 102 5 0.964286 25 4 0.2500000 4 0 0.8280519 125 5 0.741984 115 5 0.849901 95 5 0.8435555 77 5 0.70650093 72 5 0.888889 58 5 0.955556 48 4 0.865278 56 5 0.8953152 217 5 0.8135948 93 5 0.784512 44 4 0.8238594 102 5 0.9033658 116 5 0.7602456 118 5 0.898039 97 5 0.6994481 87 6 0.7836792 105 5 0.8222222 93 2 0.6666667 17 1 0.745196 56 5 0.9373134 178 5 0.7730105 69 5 0.8946157 79 5 0.8590451 82 5 0.8120879 38 5 0.872320 77 5 0.8782585 0.860668 0.3710442 0.9127712 0.735882 0.909285 0.3384615 0.7923045 0.7934578 0.9165273 0.9036696 0.923077 0.7549391 0.8586830 0.8756628 0.957161 NA 0.8181652 0.876057 0.8513229 0.766290 0.84586027 0.961538 0.9282051 0.8301282 0.8697498 0.8276521 0.695221 0.8072803 0.8953671 0.9101340 0.882353 0.8313277 0.7372460 0.8631056 0.68785038 0.865144 0.9224245 0.9245831 0.8946094 0.8682039 0.8127642 0.869152 4 0.8198722 0.862477 -0.04679651 5 0.6897256 0.821275 -0.1315498 9.9691e-01 9.4248e-04 weaklyHypometh 1.000000 1.4293e-01 insignificant 0.98253632 7.9976e-04 weaklyHypometh 1.00000 0.159952 insignificant -0.11809210 0.022647 lowCoverage 1 lowCoverage 0.8198722 0.8787313 -0.05510122 5 0.6897256 0.737292 -0.0475667 3.2567e-01 2.7032e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 4.5243e-01 2.4155e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.04895388 4.2045e-01 lowCoverage 1.0000e+00 lowCoverage 0.8198722 0.863768 -0.03584427 5 0.6897256 0.805647 -0.11592135 9.4542e-01 2.8021e-02 weaklyHypometh 1.0000e+00 8.6314e-01 insignificant 8.4519e-01 4.5215e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant -0.11541534 2.8589e-02 lowCoverage 0.9177124 lowCoverage 0.862477 0.8787313 -8.8331e-03 5 0.821275 0.737292 0.0839831 2.4140e-01 5.6611e-02 insignificant 1.0000e+00 1.0000000 insignificant 2.1726e-01 0.30231431 insignificant 1.0000e+00 1.00000 insignificant 0.0691382 1.6013e-01 lowCoverage 1.0000e+00 lowCoverage 0.862477 0.863768 0.00843691 5 0.8212754 0.805647 0.01562846 1.8062e-01 6.2603e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.9662e-01 6.9060e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.00267675 0.93038566 lowCoverage 1.00000 lowCoverage 0.8787313 0.863768 0.0248967 5 0.737292 0.805647 -0.0683546 4.1110e-02 2.5838e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 1.0875e-01 1.2437e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0664615 1.8181e-01 lowCoverage 1.0000000 lowCoverage chr2 72115903 72116903 7127 DYSF ENSG00000135636 0.828411 185 5 0.8250101 204 5 0.7593162 55 5 0.9309841 121 3 0.9236364 34 3 0.894102 273 5 0.9341991 79 5 0.9464286 65 5 0.9750000 31 5 0.9618182 43 5 0.8577853 218 5 0.700000 9 0 0.9200000 44 5 0.8333333 6 0 0.888312 44 5 0.750000 7 0 0.9800000 102 3 0.8385714 120 3 0.856410 44 5 0.927075 163 5 0.9384615 44 5 0.95000000 16 2 0.947972 112 5 0.950000 39 3 0.725926 132 5 0.8562282 166 5 0.8988889 52 5 0.800000 16 1 0.9041667 52 5 0.9312624 215 5 0.8806289 283 5 0.935218 226 5 0.4938549 115 5 0.5592895 97 5 0.5000000 32 2 0.4878788 78 5 0.628788 87 4 0.3453864 179 5 0.9405261 202 5 0.9178182 233 5 0.9224242 259 5 0.8857143 61 5 0.868641 160 5 0.8404704 0.827893 0.7755673 0.9259103 0.920585 0.900522 0.9382122 0.9456076 0.9712644 0.9601881 0.8658928 0.741379 0.9287356 0.8900432 0.8916256 0.820692 0.9758621 0.8588670 0.861037 0.9328024 0.946950 0.93965517 0.943199 0.9425287 0.8863346 0.8537609 0.9054917 0.821839 0.9166667 0.9353772 0.8816071 0.931242 0.5378433 0.5862235 0.6436782 0.48665702 0.655695 0.3775705 0.9484347 0.9283873 0.9277081 0.8998358 0.879995 0 0.8706010 0.888231 -0.01801896 5 0.8823596 0.902928 -0.0205683 8.2374e-01 1.5977e-01 insignificant 1.000000 1.0000e+00 insignificant 0.84677083 3.1642e-01 insignificant 1.00000 1.000000 insignificant -0.01670971 0.535302 lowCoverage 1 lowCoverage 0.8706010 0.3356048 0.52533590 5 0.8823596 0.496527 0.3858322 2.4403e-29 9.9969e-01 hypermethylated 2.7114e-27 1.0000e+00 hypermethylated 2.6092e-06 9.8271e-01 hypermethylated 1.0872e-04 1.0000e+00 hypermethylated 0.37398672 3.9317e-05 lowCoverage 2.0693e-03 lowCoverage 0.8706010 0.884153 -0.02274228 5 0.8823596 0.921785 -0.03942527 9.7793e-01 4.4390e-03 weaklyHypometh 1.0000e+00 3.4146e-01 insignificant 7.3466e-01 1.3605e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.03050512 1.7815e-01 lowCoverage 1.0000000 lowCoverage 0.887657 0.3350340 5.5243e-01 5 0.835773 0.413773 0.4220004 3.0219e-24 9.9793e-01 hypermethylated 3.0219e-22 1.0000000 hypermethylated 7.1354e-06 0.99472442 hypermethylated 3.1024e-04 1.00000 hypermethylated 0.3906964 2.0683e-05 lowCoverage 1.2167e-03 lowCoverage 0.888231 0.884153 -0.00487716 5 0.9029278 0.921785 -0.01885701 6.2285e-01 6.6889e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 4.1212e-01 3.2359e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.01379540 0.57270731 lowCoverage 1.00000 lowCoverage 0.3356048 0.884153 -0.5573819 5 0.496527 0.921785 -0.4252575 9.9998e-01 1.5101e-14 hypomethylated 1.0000e+00 3.7751e-12 hypomethylated 9.9409e-01 7.6423e-05 hypomethylated 1.0000e+00 6.9476e-03 hypomethylated -0.4044918 5.1666e-05 lowCoverage 0.0073809 lowCoverage chr2 72846003 72847003 7141 ENSG00000212378 0.700996 260 6 0.6328952 248 6 0.6450557 150 6 0.7325704 194 6 0.6650931 115 6 0.796344 314 6 0.6218746 118 6 0.6974104 205 6 0.6225038 161 6 0.7872878 136 6 0.7456747 265 6 0.679052 86 6 0.6975906 163 6 0.6389847 66 5 0.742338 166 6 0.645192 58 6 0.7810483 166 6 0.7353269 185 6 0.665596 98 6 0.794935 238 6 0.6878161 104 6 0.80839438 119 5 0.764686 138 6 0.618906 134 6 0.627715 71 6 0.7115631 250 6 0.6061527 115 6 0.746645 77 6 0.7017224 129 6 0.7220276 258 6 0.7176835 242 6 0.749835 333 6 0.7033349 217 6 0.6802233 101 6 0.6212870 197 4 0.7500000 21 2 0.765910 189 6 0.6237950 247 6 0.7005404 273 6 0.7825002 213 6 0.7664657 225 6 0.7465430 225 6 0.683433 255 6 0.7517043 0.681942 0.7011694 0.7750475 0.718184 0.826081 0.6755258 0.7466156 0.6802992 0.8153188 0.7949741 0.724163 0.7558714 0.7400215 0.7907139 0.694119 0.7982990 0.7840977 0.735418 0.8341084 0.750569 0.82016549 0.780023 0.6791561 0.6961452 0.7521031 0.6432942 0.783665 0.7578020 0.7800843 0.7629146 0.784709 0.7717746 0.7478722 0.7901969 0.80906149 0.802536 0.6310183 0.7581264 0.8301499 0.8048028 0.8088280 0.735156 6 0.7806604 0.779695 0.00807866 6 0.7174681 0.708247 0.0092208 2.2284e-01 6.8428e-01 insignificant 1.000000 1.0000e+00 insignificant 0.24894332 5.7783e-01 insignificant 1.00000 1.000000 insignificant -0.00387369 0.863509 insignificant 1 insignificant 0.7806604 0.7469136 0.00919876 6 0.7174681 0.704187 0.0132810 1.4635e-01 1.6577e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.5112e-01 1.0768e-02 inconclusive 1.0000e+00 7.1786e-01 insignificant 0.01063022 7.1722e-01 insignificant 1.0000e+00 insignificant 0.7806604 0.858942 -0.02194974 6 0.7174681 0.729558 -0.01209025 7.3860e-01 6.0670e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3983e-01 1.2722e-02 weaklyHypometh 1.0000e+00 0.74836600 insignificant -0.03450791 1.7355e-01 insignificant 1.0000000 insignificant 0.779695 0.7469136 -5.5564e-05 6 0.708247 0.704187 0.0040602 1.1345e-01 1.7759e-01 insignificant 9.1490e-01 1.0000000 insignificant 7.6691e-01 0.04066805 weaklyHypometh 1.0000e+00 1.00000 insignificant 0.0145039 6.4655e-01 insignificant 1.0000e+00 insignificant 0.779695 0.858942 -0.03138067 6 0.7082473 0.729558 -0.02131101 9.3082e-01 6.7206e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8446e-01 2.7920e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant -0.03063421 0.26446686 insignificant 1.00000 insignificant 0.7469136 0.858942 -0.0310406 6 0.704187 0.729558 -0.0253712 3.9436e-01 6.5467e-02 insignificant 1.0000e+00 6.2949e-01 insignificant 3.3499e-01 3.8995e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0451381 1.8517e-01 insignificant 1.0000000 insignificant chr2 72995603 72996603 7148 SPR ENSG00000116096 0.014399 720 7 0.0188027 402 7 0.0041667 416 7 0.0041112 541 7 0.0069686 271 7 0.028175 559 7 0.0111703 452 7 0.0049276 421 7 0.0169918 617 7 0.0149477 421 7 0.0133415 244 7 0.014883 478 7 0.0195425 318 7 0.0000000 90 5 0.021921 346 7 0.000000 265 7 0.0025692 756 7 0.0043956 553 6 0.026862 112 7 0.003125 541 7 0.0442177 95 6 0.00680272 292 7 0.019808 309 7 0.011111 118 7 0.011187 255 7 0.0039978 531 7 0.0118984 278 7 0.030065 176 7 0.0000000 287 7 0.0036646 414 7 0.0082115 501 7 0.023216 430 7 0.0358057 408 7 0.0073260 197 7 0.0758317 475 6 0.0160911 98 7 0.027381 134 7 0.0082726 460 7 0.0113021 642 7 0.0050000 445 7 0.0028294 460 7 0.0098426 525 7 0.024661 602 7 0.0101388 0.018645 0.0019774 0.0034144 0.009012 0.016201 0.0125015 0.0054819 0.0095893 0.0118238 0.0097482 0.011640 0.0138842 0.0052980 0.0218481 0.000000 0.0026292 0.0036506 0.016761 0.0014831 0.053430 0.00282486 0.019716 0.0115443 0.0098124 0.0035059 0.0102076 0.030957 0.0000000 0.0043859 0.0111678 0.018152 0.0371120 0.0126901 0.0625813 0.01796424 0.023894 0.0119781 0.0066702 0.0023729 0.0045301 0.0090459 0.027285 7 0.0083304 0.012208 -0.00368695 7 0.0101247 0.012537 -0.0024127 9.6437e-01 1.5325e-01 insignificant 1.000000 1.0000e+00 insignificant 0.93559157 4.0501e-01 insignificant 1.00000 1.000000 insignificant -0.00294990 0.488906 insignificant 1 insignificant 0.0083304 0.0310384 -0.02274523 7 0.0101247 0.028981 -0.0188563 9.4152e-01 1.1411e-03 weaklyHypometh 1.0000e+00 1.6302e-01 insignificant 7.7237e-01 1.5588e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01688630 1.7081e-01 insignificant 1.0000e+00 insignificant 0.0083304 0.010471 -0.00264505 7 0.0101247 0.011631 -0.00150602 9.5669e-01 2.3017e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3201e-01 5.5728e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.00083802 8.5096e-01 insignificant 1.0000000 insignificant 0.012208 0.0310384 -1.8949e-02 7 0.012537 0.028981 -0.0164435 8.8271e-01 1.7829e-01 insignificant 1.0000e+00 1.0000000 insignificant 6.6701e-01 0.48406598 insignificant 1.0000e+00 1.00000 insignificant -0.0139364 2.5511e-01 insignificant 1.0000e+00 insignificant 0.012208 0.010471 0.00095969 7 0.0125374 0.011631 0.00090670 8.3256e-01 7.3474e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.7080e-01 8.8838e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.00378792 0.48946082 insignificant 1.00000 insignificant 0.0310384 0.010471 0.0199389 7 0.028981 0.011631 0.0173502 5.5242e-01 8.8530e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.8199e-01 8.8842e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0177243 1.6150e-01 insignificant 1.0000000 insignificant chr2 73256403 73257403 7157 RAB11FIP5 ENSG00000135631 0.031135 1137 37 0.0515902 1361 39 0.1010505 1824 41 0.0608925 819 30 0.0381363 1283 41 0.058981 1522 36 0.0146268 1819 37 0.0634295 1335 37 0.0218830 1841 40 0.0105432 2146 37 0.0143624 1504 38 0.066377 1962 39 0.0433233 1727 39 0.1588602 613 16 0.051944 2037 37 0.013344 1666 37 0.0537796 1508 28 0.0431997 847 31 0.034143 1233 36 0.063681 1283 38 0.0618132 612 38 0.03863030 692 30 0.041598 950 39 0.048040 859 42 0.151725 413 24 0.0101269 1690 40 0.0215072 1273 38 0.029724 847 39 0.0416180 1161 38 0.0139729 1862 39 0.0159186 1767 40 0.073566 1526 39 0.0365094 1124 42 0.0487879 941 33 0.1058586 1081 30 0.0051282 284 26 0.076264 733 35 0.0241827 1514 35 0.0847379 1386 36 0.0809860 1202 37 0.1243029 802 27 0.0234586 1079 29 0.027534 899 31 0.0197580 0.032301 0.1159974 0.0151705 0.027386 0.041447 0.0217449 0.0180121 0.0231076 0.0120980 0.0157451 0.016719 0.0198838 0.0198967 0.0156854 0.018516 0.0165290 0.0216623 0.019402 0.0324181 0.052755 0.01955411 0.035657 0.0344063 0.0484025 0.0110907 0.0321307 0.034484 0.0383745 0.0140474 0.0183700 0.040297 0.0167753 0.0310885 0.0655003 0.00320387 0.068938 0.0226665 0.0323425 0.0169861 0.0150130 0.0243612 0.032278 28 0.0269454 0.028128 0.00034675 37 0.0696599 0.035110 0.0345496 2.4070e-02 9.9839e-01 weaklyHypermeth 1.000000 1.0000e+00 insignificant 0.03152380 9.9426e-01 weaklyHypermeth 1.00000 1.000000 insignificant 0.00407735 0.765943 insignificant 1 insignificant 0.0269179 0.0265986 0.00061816 35 0.0654030 0.086293 -0.0208905 4.8881e-01 7.2874e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.4623e-02 8.8614e-01 insignificant 8.0240e-01 1.0000e+00 insignificant 0.00030895 9.8576e-01 insignificant 1.0000e+00 insignificant 0.0268843 0.022727 0.00194351 32 0.0487861 0.105546 -0.05675958 3.9552e-01 6.7021e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.5728e-01 9.1859e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.01843980 4.0718e-01 insignificant 1.0000000 insignificant 0.028144 0.0265986 -1.9551e-05 35 0.037811 0.086293 -0.0484824 9.8963e-01 1.3417e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.7736e-01 0.56258773 insignificant 1.0000e+00 1.00000 insignificant -0.0037684 8.4336e-01 insignificant 1.0000e+00 insignificant 0.027964 0.022727 -0.00000742 32 0.0326985 0.105546 -0.07284719 9.1309e-01 1.0581e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3634e-01 3.4912e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.02251715 0.34145996 insignificant 1.00000 insignificant 0.0260177 0.022545 0.0019963 32 0.059851 0.086515 -0.0266634 7.9566e-01 8.4512e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9389e-01 9.4282e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0187488 4.6029e-01 insignificant 1.0000000 insignificant chr2 74059003 74060003 7173 ENSG00000201876 0.710594 93 5 0.7880628 113 4 0.7285475 67 5 0.8434387 128 5 0.8096947 50 5 0.753736 121 5 0.7361547 69 5 0.7208102 77 5 0.7526709 49 4 0.7329545 60 5 0.7685551 130 5 0.789524 24 2 0.7793895 63 5 0.6566667 39 4 0.749049 55 5 0.598333 26 4 0.6750000 10 1 0.7860614 82 5 0.783333 58 3 0.879125 98 5 0.5551282 32 3 0.75000000 17 2 0.837710 83 5 0.691667 41 2 0.531250 22 2 0.7610823 126 5 0.6222944 38 3 0.641667 21 2 0.6228788 51 3 0.7978149 108 4 0.7535460 121 4 0.804125 152 5 0.7907713 90 5 0.5896465 35 3 0.6316785 88 4 0.7500000 4 0 0.529532 52 3 0.5316340 68 4 0.7324017 144 5 0.7310924 99 5 0.7268772 86 5 0.6934066 60 5 0.797645 117 5 0.8031406 0.784999 0.7562317 0.8458915 0.805434 0.808784 0.6986337 0.7410944 0.8143367 0.7219022 0.7770498 0.753947 0.7705889 0.6894977 0.7439606 0.614726 0.6106603 0.8352398 0.806057 0.9060605 0.649280 0.86977258 0.866481 0.8093607 0.5786767 0.8102577 0.6928296 0.757420 0.7528539 0.7963335 0.9066090 0.834307 0.8619385 0.5844057 0.7209754 0.81050228 0.605584 0.6084833 0.8084461 0.7981179 0.8249844 0.7577902 0.864251 1 0.7776204 0.822660 -0.03153848 4 0.8235451 0.561232 0.2623131 9.9910e-01 4.0423e-01 lowCoverage 1.000000 1.0000e+00 lowCoverage 0.82312334 7.3743e-01 lowCoverage 1.00000 1.000000 lowCoverage 0.05465488 0.112205 lowCoverage 1 lowCoverage 0.7773050 0.7715134 0.02656475 4 0.7529632 0.652239 0.1007238 2.1506e-03 8.5252e-01 lowCoverage 2.6550e-02 1.0000e+00 lowCoverage 3.3512e-02 8.5850e-01 lowCoverage 4.2420e-01 1.0000e+00 lowCoverage 0.11487472 5.1459e-02 lowCoverage 7.6805e-01 lowCoverage 0.7773050 0.800395 -0.01292604 5 0.7529632 0.742122 0.01084098 2.5901e-01 1.6786e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.3865e-01 2.7761e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.01580054 4.8977e-01 lowCoverage 1.0000000 lowCoverage 0.824691 0.7715134 5.6670e-02 4 0.785725 0.652239 0.1334854 2.2036e-02 9.9040e-01 lowCoverage 2.3443e-01 1.0000000 lowCoverage 1.3537e-01 0.95087210 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.0602198 2.9165e-01 lowCoverage 1.0000e+00 lowCoverage 0.824691 0.800395 0.00891481 4 0.7857248 0.742122 0.04360258 2.8289e-01 6.5878e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 6.3631e-01 5.9616e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage -0.03885434 0.26890352 lowCoverage 1.00000 lowCoverage 0.7715134 0.800395 -0.0583508 4 0.652239 0.742122 -0.0898828 9.3900e-01 4.1536e-02 lowCoverage 1.0000e+00 4.2384e-01 lowCoverage 9.2870e-01 1.2580e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0990742 8.3458e-02 lowCoverage 1.0000000 lowCoverage chr2 74083403 74084403 7182 TET3 ENSG00000187605 0.020131 382 15 0.0690397 244 15 0.0122666 280 15 0.0072651 492 14 0.0122727 302 17 0.033254 515 16 0.0091355 283 15 0.0574163 236 15 0.0032973 350 15 0.0042986 328 15 0.0382353 223 15 0.000000 156 12 0.0329060 226 14 0.0020833 192 15 0.018077 329 15 0.133333 109 10 0.0222222 60 4 0.0096475 495 15 0.010317 237 15 0.083495 409 18 0.0081169 143 12 0.00000000 273 12 0.099321 285 14 0.021254 163 15 0.018730 384 12 0.0158728 338 15 0.0185058 262 15 0.085046 140 13 0.1524773 247 15 0.0021368 364 15 0.0297619 376 16 0.022290 336 15 0.0071849 167 7 0.0071560 286 15 0.0722222 219 12 0.0000000 75 4 0.058312 153 14 0.0153846 285 15 0.0092947 497 15 0.0085297 299 13 0.0117216 428 15 0.0532630 516 15 0.077277 389 15 0.0201876 0.032262 0.0164487 0.0141764 0.017552 0.048310 0.0167246 0.0045005 0.0050991 0.0073008 0.0248762 0.000000 0.0257997 0.0058014 0.0202321 0.021040 0.0314640 0.0152199 0.019006 0.0396233 0.018886 0.00085227 0.043018 0.0251463 0.0184591 0.0154526 0.0159599 0.060292 0.0447925 0.0057121 0.0047442 0.030473 0.0177868 0.0106338 0.0684263 0.01584559 0.020584 0.0134235 0.0127586 0.0089426 0.0104994 0.0523666 0.015288 4 0.0183313 0.020236 -0.00147409 15 0.0435887 0.038060 0.0055291 9.0759e-01 2.6377e-01 insignificant 1.000000 1.0000e+00 insignificant 0.97949357 1.3527e-01 insignificant 1.00000 1.000000 insignificant -0.01052472 0.507886 insignificant 1 insignificant 0.0184868 0.0160338 0.00094844 15 0.0503730 0.035909 0.0144639 9.0474e-01 9.9478e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4336e-01 9.9999e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00222467 8.8213e-01 insignificant 1.0000e+00 insignificant 0.0179033 0.016909 -0.00257083 15 0.0329476 0.042822 -0.00987474 9.8950e-01 5.0844e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9947e-01 9.2332e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.00308245 8.5307e-01 insignificant 1.0000000 insignificant 0.020236 0.0152284 4.2172e-03 15 0.038060 0.016446 0.0216133 6.8769e-01 9.9783e-01 insignificant 1.0000e+00 1.0000000 insignificant 5.6061e-01 0.99999083 insignificant 1.0000e+00 1.00000 insignificant 0.0127494 5.0110e-01 insignificant 1.0000e+00 insignificant 0.019500 0.016909 -0.00378467 15 0.0317694 0.042822 -0.01105294 9.1524e-01 3.6715e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.5902e-01 9.3045e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.00744227 0.71135570 insignificant 1.00000 insignificant 0.0153453 0.016909 -0.0044485 15 0.018091 0.042822 -0.0247314 9.9989e-01 7.8153e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.0000e+00 9.6625e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0053071 7.8486e-01 insignificant 1.0000000 insignificant chr2 74090103 74091103 7183 TET3 ENSG00000187605 0.807460 90 6 0.7973796 65 6 0.7374728 116 6 0.7613939 110 6 0.8551136 61 6 0.889269 193 6 0.8653475 139 6 0.8616453 110 6 0.8623608 168 6 0.7389823 144 6 0.8408469 115 6 0.818559 116 6 0.8636929 156 6 0.8625000 62 6 0.828198 142 6 0.882200 88 5 0.8694444 45 6 0.6835084 151 6 0.852315 42 6 0.832358 140 6 0.6507003 70 6 0.63159428 135 6 0.749208 160 6 0.863426 41 5 0.785564 55 6 0.8052615 104 6 0.7802189 143 6 0.768454 106 6 0.8925170 85 6 0.8320908 105 6 0.8141988 84 6 0.870062 204 6 0.3473987 104 6 0.3406593 65 6 0.4682540 62 5 0.4333333 39 6 0.330397 89 6 0.3074286 110 6 0.8402912 147 6 0.6078283 96 6 0.8432037 118 6 0.7437169 133 6 0.527074 120 6 0.8111801 0.817891 0.7429636 0.7837864 0.847716 0.887433 0.8804369 0.8854825 0.8692093 0.7482317 0.8370641 0.822807 0.8718310 0.8715781 0.8345599 0.888622 0.8658078 0.6895199 0.876812 0.8321064 0.762606 0.73562208 0.785178 0.8842593 0.7765091 0.8163018 0.7942468 0.796035 0.8843340 0.8321867 0.8076378 0.875642 0.3533733 0.2768488 0.4538762 0.42995169 0.370435 0.3174423 0.8513380 0.6342776 0.8450310 0.7557262 0.535205 5 0.8300044 0.815361 0.01266141 6 0.8240855 0.809478 0.0146076 3.3955e-01 9.3104e-01 insignificant 1.000000 1.0000e+00 insignificant 0.34785355 9.1529e-01 insignificant 1.00000 1.000000 insignificant 0.03856112 0.161911 insignificant 1 insignificant 0.8300044 0.3297645 0.49360666 6 0.8240855 0.337343 0.4867424 3.8015e-38 9.9780e-01 hypermethylated 9.5036e-36 1.0000e+00 hypermethylated 1.8041e-09 9.9707e-01 hypermethylated 2.5773e-07 1.0000e+00 hypermethylated 0.45425731 5.8458e-07 hypermethylated 6.4954e-05 hypermethylated 0.8300044 0.741042 0.09296038 6 0.8240855 0.714602 0.10948317 2.8276e-05 9.9985e-01 weaklyHypermeth 1.8851e-03 1.0000e+00 weaklyHypermeth 2.7550e-03 9.9986e-01 weaklyHypermeth 1.7218e-01 1.00000000 insignificant 0.11307953 1.4846e-01 insignificant 1.0000000 insignificant 0.814241 0.3304904 4.7610e-01 6 0.741457 0.360580 0.3808775 1.6029e-24 9.5449e-01 hypermethylated 2.2393e-22 1.0000000 hypermethylated 3.8821e-07 0.99369261 hypermethylated 3.2351e-05 1.00000 hypermethylated 0.4156962 3.5801e-08 hypermethylated 7.1602e-06 hypermethylated 0.815361 0.741042 0.08343748 6 0.8094779 0.714602 0.09487560 3.0941e-03 9.9374e-01 weaklyHypermeth 1.4064e-01 1.0000e+00 insignificant 2.5332e-02 9.9821e-01 weaklyHypermeth 1.0000e+00 1.0000000 insignificant 0.07451842 0.31735808 insignificant 1.00000 insignificant 0.3297645 0.741042 -0.3838637 6 0.337343 0.714602 -0.3772592 9.9729e-01 4.4110e-09 hypomethylated 1.0000e+00 3.1507e-07 hypomethylated 9.9266e-01 1.4266e-04 hypomethylated 1.0000e+00 9.3963e-03 hypomethylated -0.3411778 3.3972e-03 weaklyHypometh 0.1132398 insignificant chr2 74384503 74385503 7203 MTHFD2 ENSG00000065911 0.907025 439 14 0.7462698 103 11 0.7057619 155 11 0.8848693 344 14 0.7528139 66 7 0.782861 330 13 0.9090909 72 6 0.8120134 101 9 0.8867677 66 7 0.7130688 99 6 0.8980871 312 14 0.616296 48 3 0.7416002 145 8 NA 0 0 0.829259 94 7 0.737949 65 5 0.8991101 54 5 0.8753846 376 14 0.887244 139 14 0.864005 290 14 0.9227273 59 6 0.85241148 110 8 0.820934 236 14 0.612500 55 8 0.909740 90 8 0.8753999 249 14 0.9100855 76 7 0.890000 52 5 0.8861111 64 7 0.8866206 210 14 0.8670908 222 13 0.861450 452 15 0.6175097 129 9 0.7517444 137 9 0.7938269 278 15 0.8490121 97 9 0.815193 67 8 0.8369340 264 14 0.8197090 350 14 0.8958503 424 14 0.8546713 428 14 0.8858106 322 14 0.923083 388 14 0.8895773 0.875937 0.8058376 0.8855810 0.796954 0.829403 0.9153976 0.8186774 0.8877865 0.8906414 0.8462787 0.615623 0.8988496 NA 0.9216018 0.952948 0.8930831 0.8957197 0.915112 0.8794484 0.898477 0.80332273 0.904336 0.7664975 0.9132441 0.9315091 0.8670875 0.919525 0.8826142 0.9176001 0.9216101 0.875847 0.7329955 0.7782182 0.7907146 0.87235877 0.785981 0.8387895 0.8673498 0.9411067 0.8494555 0.9309842 0.913083 3 0.8699212 0.871863 -0.00984130 10 0.8496674 0.856954 -0.0072870 9.4727e-01 3.4398e-01 insignificant 1.000000 1.0000e+00 insignificant 0.87392123 6.8147e-02 insignificant 1.00000 1.000000 insignificant -0.04479221 0.160719 insignificant 1 insignificant 0.8699212 0.8084449 0.05710719 9 0.8496674 0.807068 0.0425994 4.7660e-04 9.7060e-01 weaklyHypermeth 6.6195e-03 1.0000e+00 weaklyHypermeth 7.2497e-03 9.7787e-01 weaklyHypermeth 1.2083e-01 1.0000e+00 insignificant 0.03576036 3.9810e-01 insignificant 1.0000e+00 insignificant 0.8699212 0.913703 -0.02857753 10 0.8496674 0.882766 -0.03309854 9.8113e-01 7.9727e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 7.3528e-01 2.3523e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.06269440 3.2938e-02 weaklyHypometh 0.9177124 insignificant 0.871467 0.8076132 6.3772e-02 13 0.834645 0.756626 0.0780184 9.3624e-05 9.6120e-01 weaklyHypermeth 1.6142e-03 1.0000000 weaklyHypermeth 6.0343e-04 0.99956678 weaklyHypermeth 1.3410e-02 1.00000 weaklyHypermeth 0.0805526 8.6295e-02 insignificant 1.0000e+00 insignificant 0.871863 0.913703 -0.01538488 14 0.8569543 0.882766 -0.02581158 9.5387e-01 1.4281e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.0956e-01 8.4733e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.01790219 0.55544372 insignificant 1.00000 insignificant 0.8084449 0.913703 -0.0803040 13 0.807068 0.882766 -0.0756979 9.9847e-01 4.2990e-06 weaklyHypometh 1.0000e+00 1.4330e-04 weaklyHypometh 9.9616e-01 2.0896e-04 weaklyHypometh 1.0000e+00 1.0868e-02 weaklyHypometh -0.0984548 3.8887e-02 weaklyHypometh 0.5569399 insignificant chr2 74921203 74922203 7221 HK2 ENSG00000159399 0.727875 221 7 0.6690375 144 7 0.6066501 93 7 0.7207000 150 7 0.8655329 84 7 0.737709 372 7 0.7687233 108 7 0.6898029 156 7 0.8013043 120 7 0.6370390 92 7 0.7962871 338 7 0.606863 71 4 0.6895624 145 7 0.7269231 42 1 0.798110 142 7 0.786266 62 4 0.7593168 73 3 0.7767604 147 7 0.751346 130 7 0.705038 280 7 0.8100000 62 5 0.85462185 75 6 0.799904 143 7 0.717045 88 6 0.826840 71 7 0.7404436 228 7 0.8074848 58 3 0.797683 61 4 0.7242868 131 7 0.7477534 193 7 0.7532269 189 7 0.869064 391 7 0.8157029 129 7 0.6857647 94 7 0.7442898 245 7 0.9166667 22 2 0.751840 101 3 0.7141634 180 7 0.7702772 159 7 0.8681371 206 7 0.7911870 193 7 0.8580361 172 7 0.730550 222 7 0.8573731 0.740857 0.6849605 0.8545056 0.883121 0.885066 0.8332236 0.8139955 0.8378244 0.7512936 0.8490843 0.716282 0.8540959 0.7911752 0.8784006 0.863877 0.8446089 0.8679413 0.802000 0.8789434 0.838793 0.88536173 0.869395 0.8233297 0.8659875 0.8522478 0.8274632 0.914649 0.7727979 0.8591296 0.8610953 0.872585 0.8528992 0.7483558 0.7895126 0.88498359 0.814607 0.8391308 0.8668204 0.9121262 0.8837412 0.8738645 0.891505 3 0.8181818 0.839053 -0.01270641 7 0.6971851 0.743099 -0.0459136 8.4759e-01 7.6406e-02 insignificant 1.000000 1.0000e+00 insignificant 0.94028117 3.8591e-02 weaklyHypometh 1.00000 1.000000 insignificant -0.05632049 0.012012 weaklyHypometh 1 insignificant 0.8200540 0.8223087 0.01804475 7 0.7492019 0.713853 0.0353492 9.8969e-02 8.5514e-01 insignificant 8.5318e-01 1.0000e+00 insignificant 4.3415e-01 7.0407e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04036233 3.1430e-01 insignificant 1.0000e+00 insignificant 0.8181818 0.860294 -0.05518573 7 0.6971851 0.742402 -0.04521716 9.9330e-01 8.9359e-03 weaklyHypometh 1.0000e+00 5.2564e-01 insignificant 9.9749e-01 6.2091e-03 weaklyHypometh 1.0000e+00 0.41393995 insignificant -0.07259524 4.7779e-02 weaklyHypometh 0.9644885 insignificant 0.840261 0.8223087 3.0447e-02 7 0.765199 0.713853 0.0513458 5.0183e-02 9.4501e-01 insignificant 4.7793e-01 1.0000000 insignificant 7.4773e-02 0.99475838 insignificant 8.0401e-01 1.00000 insignificant 0.0159582 6.7959e-01 insignificant 1.0000e+00 insignificant 0.839053 0.860294 -0.04042164 7 0.7430987 0.742402 0.00069641 7.5548e-01 1.0273e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.5833e-01 3.2784e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.01627475 0.60470825 insignificant 1.00000 insignificant 0.8223087 0.863924 -0.0703191 7 0.713853 0.809893 -0.0960406 1.0000e+00 4.0275e-03 weaklyHypometh 1.0000e+00 5.2306e-02 weaklyHypometh 1.0000e+00 2.5845e-02 weaklyHypometh 1.0000e+00 3.3650e-01 insignificant -0.0322329 4.7270e-01 insignificant 1.0000000 insignificant chr2 74954003 74955003 7227 HK2 ENSG00000159399 0.908166 499 5 0.7538191 249 5 0.7871212 46 5 0.9574790 262 3 0.7195238 47 4 0.891239 237 5 0.4913872 68 3 0.8743898 134 5 0.7787746 70 3 0.8193360 80 5 0.9173837 197 5 0.866667 15 1 0.9624498 142 5 0.9335664 57 3 0.901534 102 5 0.760000 17 1 0.9166667 10 0 0.9596182 793 5 0.921209 280 4 0.875148 256 5 0.7483292 61 5 0.77645022 105 3 0.918876 169 5 0.971429 21 1 0.671142 266 3 0.8857188 278 5 0.8223529 135 5 0.571429 8 0 0.9152691 182 3 0.9185571 344 5 0.9210840 300 5 0.916241 233 5 0.9620163 141 5 0.8805024 271 5 0.8293939 229 5 0.8000000 14 0 0.985714 43 4 0.9451341 290 4 0.9767829 235 3 0.9580891 299 5 0.9687285 462 3 0.8940983 330 3 0.988553 260 3 0.9302563 0.926624 0.7824542 0.9378048 0.744562 0.919561 0.6952176 0.8736894 0.8037523 0.8772049 0.9058515 0.790123 0.9779875 0.9185354 0.9009243 0.861728 0.8621150 0.9403877 0.943054 0.9201608 0.921501 0.90143766 0.936291 0.9453263 0.9109156 0.9491447 0.7664165 0.603144 0.9370868 0.9301997 0.9842295 0.909659 0.9376745 0.9387516 0.7871119 0.93827160 0.972663 0.9651442 0.9677155 0.9607591 0.9536083 0.9028616 0.981290 1 0.9190784 0.930310 -0.01330369 5 0.8487963 0.760662 0.0881347 9.9774e-01 3.9398e-01 insignificant 1.000000 1.0000e+00 insignificant 0.99562450 1.7872e-01 insignificant 1.00000 1.000000 insignificant 0.01336747 0.759875 lowCoverage 1 lowCoverage 0.9195273 0.9129555 0.00464622 5 0.8914075 0.912264 -0.0208563 5.6727e-01 9.7191e-04 inconclusive 1.0000e+00 1.6198e-01 insignificant 9.9720e-01 6.2521e-05 inconclusive 1.0000e+00 3.1260e-02 inconclusive -0.05068626 2.2613e-01 lowCoverage 1.0000e+00 lowCoverage 0.9195273 0.948928 -0.02646159 3 0.8914075 0.947135 -0.05572768 9.9839e-01 2.8483e-02 lowCoverage 1.0000e+00 8.6314e-01 lowCoverage 9.9998e-01 4.6627e-04 lowCoverage 1.0000e+00 0.11656700 lowCoverage -0.10747634 1.8310e-03 lowCoverage 0.1525803 lowCoverage 0.931579 0.9129555 1.7868e-02 5 0.917059 0.912264 0.0047948 6.7786e-01 3.2157e-02 inconclusive 1.0000e+00 1.0000000 insignificant 9.8277e-01 0.00834442 inconclusive 1.0000e+00 1.00000 insignificant -0.0640537 1.9114e-01 lowCoverage 1.0000e+00 lowCoverage 0.931579 0.948928 -0.01506960 3 0.9170586 0.947135 -0.03007658 9.5662e-01 1.9282e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.8325e-01 5.2463e-02 lowCoverage 1.0000e+00 1.0000000 lowCoverage -0.12084381 0.00742334 lowCoverage 0.85439 lowCoverage 0.9129555 0.948928 -0.0355254 3 0.912264 0.947135 -0.0348714 4.1001e-02 5.9241e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.6281e-02 7.5967e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0567901 1.4610e-01 lowCoverage 1.0000000 lowCoverage chr2 80159803 80160803 7287 CTNNA2 ENSG00000066032 0.740353 503 12 0.7128816 263 12 0.6370056 242 12 0.7444497 361 12 0.6603751 165 11 0.731163 789 12 0.6815787 200 12 0.6272334 228 12 0.6701232 153 11 0.6611898 227 12 0.6886845 594 12 0.703202 104 7 0.6207508 247 12 0.6731061 53 6 0.746033 212 12 0.603737 141 11 0.7376894 77 7 0.7869489 380 12 0.776703 263 12 0.700050 478 12 0.7750305 90 9 0.70589222 227 12 0.727074 316 12 0.843046 132 9 0.772472 149 9 0.6895219 404 12 0.7497885 190 10 0.590986 91 8 0.6348157 158 11 0.6913891 357 12 0.6798900 349 12 0.721781 731 12 0.5606881 269 12 0.6406691 203 12 0.6839593 333 12 0.6718254 83 11 0.622255 207 11 0.6194730 388 12 0.7479557 512 12 0.7052911 392 12 0.6754069 365 12 0.6760824 371 12 0.722336 548 12 0.7249462 0.687264 0.6271542 0.7472848 0.681178 0.750710 0.7086771 0.7222384 0.6774207 0.7360520 0.7289828 0.739177 0.7049364 0.7046151 0.7659579 0.675234 0.7039768 0.7780805 0.745017 0.7326062 0.764064 0.74982801 0.703510 0.8076869 0.7679515 0.7224512 0.7218752 0.655730 0.6613619 0.7288098 0.6769784 0.709756 0.5864164 0.6279887 0.6787875 0.66176806 0.671105 0.6656477 0.7360170 0.7268825 0.7101882 0.6867559 0.744045 8 0.7080986 0.685661 0.01660015 12 0.7126619 0.688750 0.0239120 1.9239e-01 8.9778e-01 insignificant 1.000000 1.0000e+00 insignificant 0.60920237 3.0160e-01 insignificant 1.00000 1.000000 insignificant -0.01997764 0.385736 insignificant 1 insignificant 0.7080986 0.6378962 0.07212477 12 0.7126619 0.588580 0.1240823 8.1764e-08 1.0000e+00 weaklyHypermeth 2.0441e-06 1.0000e+00 weaklyHypermeth 3.6778e-05 9.9978e-01 weaklyHypermeth 1.1145e-03 1.0000e+00 weaklyHypermeth 0.06201791 1.6522e-02 weaklyHypermeth 3.2649e-01 insignificant 0.7079147 0.702011 0.00539983 12 0.7015480 0.705527 -0.00397857 4.9083e-01 2.5243e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.8212e-01 2.6190e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.01025142 5.8311e-01 insignificant 1.0000000 insignificant 0.685661 0.6378962 5.7924e-02 12 0.688750 0.588580 0.1001702 1.3388e-06 9.9987e-01 weaklyHypermeth 3.0427e-05 1.0000000 weaklyHypermeth 2.5015e-05 0.99999350 weaklyHypermeth 1.0006e-03 1.00000 weaklyHypermeth 0.0819955 7.4251e-03 weaklyHypermeth 2.0074e-01 insignificant 0.685220 0.702011 -0.00770446 12 0.6812910 0.705527 -0.02423549 8.2232e-01 1.2633e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.1071e-01 4.8871e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.00972622 0.68817615 insignificant 1.00000 insignificant 0.6383266 0.702011 -0.0668313 12 0.633855 0.705527 -0.0716715 9.9833e-01 2.1597e-06 weaklyHypometh 1.0000e+00 7.4471e-05 weaklyHypometh 9.9848e-01 7.0383e-04 weaklyHypometh 1.0000e+00 2.3461e-02 weaklyHypometh -0.0722693 1.1435e-02 weaklyHypometh 0.2342171 insignificant chr2 84887103 84888103 7342 DNAH6 ENSG00000115423 0.853961 239 5 0.8042484 63 5 0.7066667 71 5 0.7463982 99 5 0.6829365 43 4 0.820848 158 5 0.6209524 53 5 0.8437500 59 4 0.8126061 76 5 0.6354575 56 5 0.7763772 112 5 0.680372 74 5 0.6707265 67 5 0.8571429 7 1 0.792331 53 5 0.667273 56 5 0.7000000 36 5 0.7339039 102 5 0.762755 143 5 0.846550 133 5 0.6000000 32 3 0.84855072 42 3 0.798255 82 5 0.771429 29 2 0.714286 16 2 0.8716117 99 5 0.4533333 44 2 0.814286 20 2 0.3777778 41 2 0.7929053 93 5 0.7676059 93 5 0.728370 187 5 0.6727018 53 2 0.6384158 91 5 0.6436022 75 5 0.8333333 17 2 0.895476 47 3 0.6568855 118 5 0.8476180 230 5 0.7785971 189 5 0.8065866 151 5 0.8235691 182 5 0.750507 168 5 0.8979241 0.849328 0.7975535 0.8204305 0.789318 0.887460 0.7937090 0.8731651 0.8630414 0.8338280 0.8483712 0.801528 0.8310398 NA 0.8897013 0.709591 0.8519004 0.8267271 0.844332 0.8875246 0.779817 0.85739928 0.851424 0.7457405 0.8127904 0.9296804 0.6969419 0.845032 0.6625892 0.8972652 0.8766336 0.825405 0.8325189 0.7409149 0.7647156 0.87461774 0.913292 0.7524318 0.8958756 0.8574296 0.8391752 0.8762220 0.841271 2 0.7994118 0.817481 0.00142248 5 0.7605972 0.756976 0.0036213 3.3980e-01 2.0116e-01 insignificant 1.000000 1.0000e+00 insignificant 0.16957279 3.0426e-01 insignificant 1.00000 1.000000 insignificant 0.03922867 0.428208 lowCoverage 1 lowCoverage 0.7994118 0.7456359 0.06708418 5 0.7605972 0.680394 0.0802036 3.2095e-03 9.9949e-01 weaklyHypermeth 3.7759e-02 1.0000e+00 weaklyHypermeth 1.2785e-01 8.6879e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02736032 5.9301e-01 lowCoverage 1.0000e+00 lowCoverage 0.7994118 0.813043 -0.04282000 5 0.7605972 0.811076 -0.05047848 9.8676e-01 1.2046e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4382e-01 1.6348e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.05061279 5.5492e-02 lowCoverage 1.0000000 lowCoverage 0.817481 0.7456359 6.3954e-02 5 0.756976 0.680394 0.0765823 5.7145e-04 9.8179e-01 weaklyHypermeth 8.2819e-03 1.0000000 weaklyHypermeth 1.0488e-01 0.64224131 insignificant 1.0000e+00 1.00000 insignificant -0.0118683 8.5561e-01 lowCoverage 1.0000e+00 lowCoverage 0.817481 0.813043 -0.04545034 5 0.7569759 0.811076 -0.05409978 7.6835e-01 1.2408e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.1006e-01 5.9136e-02 insignificant 1.0000e+00 1.0000000 insignificant -0.08984146 0.08315384 lowCoverage 1.00000 lowCoverage 0.7456359 0.813043 -0.1052697 5 0.680394 0.811076 -0.1306821 9.9999e-01 3.8472e-04 weaklyHypometh 1.0000e+00 6.5207e-03 weaklyHypometh 9.8494e-01 1.0652e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0779731 1.5733e-01 lowCoverage 1.0000000 lowCoverage chr2 85097703 85098703 7358 KCMF1 ENSG00000176407 0.884012 374 12 0.6680094 186 10 0.7118156 121 11 0.8032682 232 11 0.7166667 56 6 0.793647 270 11 0.7216319 75 9 0.7999632 120 9 0.6625441 110 6 0.6796037 69 5 0.8112255 316 12 0.668881 70 6 0.8375779 122 9 0.8282828 33 2 0.726328 125 11 0.819444 68 6 0.6055556 80 6 0.8282252 229 12 0.819941 168 11 0.789369 256 11 0.7087302 43 5 0.70151215 82 9 0.774576 191 12 0.920635 54 5 0.760582 67 9 0.7892147 223 11 0.8527644 117 5 0.809524 36 4 0.8783084 169 9 0.7547351 181 11 0.8444199 217 11 0.859299 311 11 0.8072385 140 9 0.7982804 113 11 0.8313228 153 11 0.6440771 61 4 0.799423 82 9 0.7961707 147 11 0.8552836 281 12 0.8386070 274 12 0.7937504 277 12 0.8614346 255 12 0.800864 285 12 0.8676401 0.660147 0.7130943 0.8378554 0.793925 0.815303 0.7585265 0.8424582 0.6694500 0.7174738 0.8543019 0.777942 0.8099674 0.8118491 0.7418866 0.818536 0.7270639 0.8327733 0.837308 0.7963386 0.713418 0.74726841 0.786106 0.8901986 0.8640595 0.8375143 0.8306187 0.822085 0.8563988 0.8397037 0.8471626 0.880904 0.7843513 0.7845646 0.7747871 0.74090909 0.765586 0.7893728 0.8607617 0.8455908 0.7763621 0.8517530 0.821251 4 0.7987013 0.825547 -0.03369599 10 0.8173577 0.838636 -0.0212781 9.8305e-01 2.8433e-02 weaklyHypometh 1.000000 1.0000e+00 insignificant 0.98539671 1.1174e-02 weaklyHypometh 1.00000 1.000000 insignificant -0.04572540 0.090602 insignificant 1 insignificant 0.7985682 0.7686782 0.02101172 9 0.8046435 0.803350 0.0012936 2.9938e-02 7.0061e-01 weaklyHypermeth 3.0358e-01 1.0000e+00 insignificant 4.0067e-01 2.2797e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02061907 5.3984e-01 insignificant 1.0000e+00 insignificant 0.7984370 0.865160 -0.03857430 11 0.7883638 0.831243 -0.04287922 9.7515e-01 2.6017e-02 weaklyHypometh 1.0000e+00 8.6314e-01 insignificant 9.9421e-01 2.0289e-02 weaklyHypometh 1.0000e+00 0.93408058 insignificant -0.07118827 4.7788e-03 weaklyHypometh 0.2914899 insignificant 0.825030 0.7686782 5.5235e-02 9 0.813811 0.803350 0.0104606 2.8812e-03 9.3388e-01 weaklyHypermeth 3.6016e-02 1.0000000 weaklyHypermeth 8.4391e-02 0.81947518 insignificant 8.6113e-01 1.00000 insignificant 0.0251063 4.7553e-01 insignificant 1.0000e+00 insignificant 0.824822 0.865160 -0.00198235 10 0.7982947 0.831243 -0.03294832 3.7270e-01 3.4996e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 4.3714e-01 2.1125e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.02546287 0.30791425 insignificant 1.00000 insignificant 0.7683453 0.865160 -0.0540747 9 0.786962 0.831243 -0.0442806 9.4245e-01 6.2569e-03 weaklyHypometh 1.0000e+00 7.9202e-02 weaklyHypometh 8.6089e-01 2.1423e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0505692 1.4396e-01 insignificant 1.0000000 insignificant chr2 85474103 85475103 7365 ENSG00000208809,ENSG00000222600 0.674620 184 7 0.6767486 134 7 0.6653552 108 7 0.6534526 163 7 0.6062925 45 4 0.698206 352 7 0.7459335 108 6 0.5974624 138 7 0.6592329 94 7 0.7622817 89 7 0.5304466 214 7 0.763946 41 4 0.6599070 126 7 0.7714286 27 2 0.695225 116 7 0.756868 33 2 0.7328665 54 4 0.7093868 194 7 0.704529 172 7 0.776206 251 7 0.9044913 58 4 0.69381682 90 7 0.541966 106 7 0.574411 63 5 0.705536 77 7 0.6430447 238 7 0.7340136 76 7 0.571088 47 4 0.6853527 95 7 0.6498616 247 7 0.6359234 195 7 0.703804 341 7 0.5839551 139 7 0.7298694 91 7 0.5958137 139 7 0.6400433 47 5 0.658608 90 7 0.7220126 222 7 0.6113761 199 7 0.6786260 181 7 0.7174580 198 7 0.7639073 172 7 0.753881 196 7 0.7118917 0.761513 0.6923720 0.6990943 0.669229 0.738625 0.8027979 0.6791910 0.6907680 0.8067312 0.7320124 0.742989 0.7176666 0.6951663 0.7385197 0.780004 0.7047295 0.7487654 0.746994 0.7610455 0.882869 0.78298836 0.690186 0.7530513 0.7596378 0.6975598 0.7688713 0.831652 0.7741052 0.7666446 0.7405427 0.736001 0.6772266 0.7852077 0.6838607 0.73581650 0.674449 0.7746730 0.7907188 0.7644388 0.7796216 0.7762831 0.802309 4 0.7143398 0.726271 -0.01573824 7 0.5861271 0.610568 -0.0244407 8.7110e-01 6.6371e-02 insignificant 1.000000 1.0000e+00 insignificant 0.96723314 5.7360e-02 insignificant 1.00000 1.000000 insignificant 0.02174392 0.493840 insignificant 1 insignificant 0.7147727 0.7046703 0.01228732 7 0.6821634 0.658975 0.0231880 4.1239e-01 7.4634e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.1544e-01 7.4478e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03696935 2.3531e-01 insignificant 1.0000e+00 insignificant 0.7143398 0.726216 -0.03848886 7 0.5861271 0.616740 -0.03061271 9.7318e-01 7.6688e-03 weaklyHypometh 1.0000e+00 4.7930e-01 insignificant 9.6775e-01 6.3897e-02 insignificant 1.0000e+00 1.00000000 insignificant -0.01302998 6.9154e-01 insignificant 1.0000000 insignificant 0.731390 0.7046703 2.8410e-02 7 0.689778 0.658975 0.0308022 1.6467e-01 9.8229e-01 insignificant 1.0000e+00 1.0000000 insignificant 8.3297e-02 0.99307538 insignificant 8.6113e-01 1.00000 insignificant 0.0152254 6.8851e-01 insignificant 1.0000e+00 insignificant 0.726271 0.726216 -0.02460609 7 0.6105678 0.616740 -0.00617200 8.8096e-01 2.6633e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.5760e-01 5.3642e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.03477390 0.39212972 insignificant 1.00000 insignificant 0.7046703 0.728238 -0.0573403 7 0.658975 0.721523 -0.0625472 9.9656e-01 2.8963e-02 weaklyHypometh 1.0000e+00 3.1481e-01 insignificant 9.9897e-01 3.2972e-02 weaklyHypometh 1.0000e+00 4.1214e-01 insignificant -0.0499993 2.1621e-01 insignificant 1.0000000 insignificant chr2 85492703 85493703 7366 CAPG ENSG00000042493 0.694526 441 11 0.6545674 288 11 0.6415256 238 11 0.7116406 270 11 0.7144402 145 12 0.606043 467 11 0.6071542 173 11 0.5911183 203 11 0.5563028 164 11 0.6406884 155 11 0.6904577 455 11 0.621450 87 9 0.7627791 261 11 0.8690476 82 9 0.708204 162 11 0.616327 89 7 0.7662998 760 6 0.6891062 292 11 0.807133 250 11 0.740775 379 11 0.7405483 102 9 0.73698747 137 11 0.717442 202 11 0.691035 109 9 0.680886 105 11 0.7422186 360 11 0.7433397 190 11 0.625198 72 6 0.7736255 218 11 0.6713986 383 11 0.6395207 335 11 0.630993 400 11 0.6467609 185 11 0.6531976 147 11 0.6068886 217 10 0.5974359 51 4 0.406757 156 7 0.7434185 272 11 0.7394960 309 11 0.7736880 334 11 0.7068001 281 11 0.7420599 228 11 0.741741 310 11 0.7201375 0.689743 0.7114283 0.7435163 0.782473 0.717207 0.6643739 0.6575092 0.6574506 0.7221830 0.7303045 0.733123 0.7798240 0.7601074 0.7501190 0.767428 0.8214135 0.7196819 0.814354 0.7601763 0.717871 0.71424315 0.734203 0.7189473 0.7043440 0.7586504 0.7522597 0.670447 0.7953257 0.7517134 0.7279258 0.713976 0.6476159 0.6748842 0.6937651 0.73191151 0.573556 0.7729994 0.7687140 0.8051508 0.7495935 0.7634325 0.784336 6 0.7556426 0.748565 0.01102804 11 0.6372901 0.715794 -0.0785042 3.6484e-01 2.7011e-01 insignificant 1.000000 1.0000e+00 insignificant 0.73012766 1.7532e-01 insignificant 1.00000 1.000000 insignificant -0.01495358 0.517086 insignificant 1 insignificant 0.7559246 0.6955253 0.05384003 11 0.6863124 0.614839 0.0714735 1.6019e-03 9.9452e-01 weaklyHypermeth 2.0277e-02 1.0000e+00 weaklyHypermeth 3.6680e-02 9.7290e-01 weaklyHypermeth 4.5849e-01 1.0000e+00 insignificant 0.07540279 1.6997e-01 insignificant 1.0000e+00 insignificant 0.7567922 0.757866 -0.01659859 11 0.7151369 0.737506 -0.02236870 8.8508e-01 1.1429e-02 weaklyHypometh 1.0000e+00 6.0152e-01 insignificant 9.9919e-01 3.3058e-03 weaklyHypometh 1.0000e+00 0.32140212 insignificant -0.05627768 1.2102e-02 weaklyHypometh 0.5762651 insignificant 0.748370 0.6955253 4.1515e-02 11 0.706753 0.614839 0.0919139 8.1982e-03 9.2727e-01 weaklyHypermeth 9.4232e-02 1.0000000 weaklyHypermeth 3.1227e-02 0.98722904 weaklyHypermeth 3.9034e-01 1.00000 insignificant 0.0903564 1.0785e-01 insignificant 1.0000e+00 insignificant 0.748748 0.757866 -0.03792677 11 0.6988897 0.737506 -0.03861591 9.7357e-01 1.1521e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.8000e-01 2.0642e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant -0.04132410 0.03649054 weaklyHypometh 1.00000 insignificant 0.6983350 0.757866 -0.0749681 11 0.666022 0.737506 -0.0714838 9.7940e-01 8.3693e-04 weaklyHypometh 1.0000e+00 1.2876e-02 weaklyHypometh 9.9609e-01 6.0518e-04 weaklyHypometh 1.0000e+00 2.2100e-02 weaklyHypometh -0.1316805 3.3555e-02 weaklyHypometh 0.5223790 insignificant chr2 85501703 85502703 7367 SH2D6 ENSG00000152292 0.884587 561 5 0.4769429 496 8 0.7474776 217 7 0.7915665 339 6 0.7825052 112 6 0.661730 614 7 0.5832405 198 6 0.7315941 268 5 0.6733408 128 5 0.8656136 99 5 0.7882019 440 7 0.574055 68 5 0.6013468 174 5 0.6616606 122 6 0.559489 145 5 0.285714 58 5 1.0000000 670 5 0.4063702 552 5 0.864155 635 5 0.724521 495 5 0.5809891 127 6 0.32990084 69 3 0.695584 238 7 0.595838 127 7 0.631579 70 5 0.6717700 641 8 0.6440765 275 5 0.522918 71 5 0.6165341 467 5 0.6843619 505 8 0.8103940 371 8 0.823358 461 7 0.6274642 400 8 0.5975610 222 5 0.9583333 160 4 1.0000000 3 0 0.675852 182 7 0.6607991 684 8 0.8558477 420 5 0.8067331 413 8 0.8018113 399 5 0.6769424 519 5 0.378633 366 6 0.8011613 0.376104 0.7115101 0.6317070 0.652780 0.689779 0.4903927 0.6293077 0.6182222 0.7699467 0.7652089 0.554445 0.5585813 0.6714708 0.6102586 0.109091 1.0000000 0.6062559 0.776823 0.7321789 0.558127 0.67912278 0.767989 0.6216649 0.7444737 0.6109999 0.5574109 0.433617 0.7311966 0.6232739 0.7539384 0.688322 0.6865283 0.8657058 1.0000000 NA 0.777787 0.7865251 0.7746753 0.8404520 0.8311328 0.6978469 0.562433 5 0.7189358 0.682642 0.03216983 6 0.6603435 0.640593 0.0197503 1.6074e-01 9.5330e-01 insignificant 1.000000 1.0000e+00 insignificant 0.21127560 9.7743e-01 insignificant 1.00000 1.000000 insignificant 0.04926358 0.367616 insignificant 1 insignificant 0.7189358 0.6335554 0.08762495 7 0.6603435 0.630308 0.0300357 2.1771e-03 6.7159e-02 weaklyHypermeth 2.6550e-02 1.0000e+00 weaklyHypermeth 4.6152e-01 8.8040e-03 inconclusive 1.0000e+00 6.2886e-01 insignificant -0.07012939 4.1792e-01 insignificant 1.0000e+00 insignificant 0.7193862 0.658007 0.04646116 6 0.7337150 0.686053 0.04766216 3.7228e-02 5.6308e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 1.8623e-01 1.7632e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.02078799 8.3406e-01 insignificant 1.0000000 insignificant 0.682642 0.6335554 3.4007e-02 7 0.640593 0.630308 0.0102854 4.3697e-02 6.5592e-05 weaklyHypermeth 4.2016e-01 0.0218641 weaklyHypermeth 7.9285e-01 0.00289343 inconclusive 1.0000e+00 0.72336 insignificant -0.1193930 1.8237e-01 insignificant 1.0000e+00 insignificant 0.684041 0.658007 0.00704286 5 0.7117702 0.686053 0.02571739 1.3847e-01 1.4144e-02 inconclusive 1.0000e+00 1.0000e+00 insignificant 7.4139e-01 4.6861e-02 inconclusive 1.0000e+00 1.0000000 insignificant -0.07005157 0.48756302 insignificant 1.00000 insignificant 0.6358663 0.658007 -0.0553589 6 0.700342 0.686053 0.0142892 2.3505e-01 4.0584e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.5543e-01 8.4748e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0493414 6.7315e-01 insignificant 1.0000000 insignificant chr2 85517703 85518703 7369 SH2D6 ENSG00000152292 0.057758 1464 38 0.0723345 1023 30 0.1519290 902 30 0.0773841 1505 37 0.1050206 635 26 0.108293 1653 36 0.1277827 962 30 0.0555834 881 33 0.0621557 1306 27 0.0601625 1395 31 0.1463983 872 33 0.087913 930 32 0.0733707 1058 32 0.0664274 500 20 0.054219 1266 31 0.066249 774 29 0.0382871 784 26 0.1342742 2030 37 0.068827 599 21 0.075977 1511 40 0.1436995 599 32 0.08747405 1147 38 0.072926 1116 38 0.086223 502 30 0.081817 779 34 0.0392590 1265 33 0.1142447 934 37 0.121524 671 26 0.0674374 836 31 0.1365338 1300 36 0.0848202 1209 31 0.101560 1491 37 0.0138349 891 26 0.0427424 704 34 0.1021667 477 15 0.0502115 448 33 0.059975 575 31 0.0223498 916 27 0.0571324 1885 38 0.0843562 1823 38 0.0658242 1300 38 0.0589062 1653 37 0.073028 1941 38 0.0769196 0.082242 0.1128487 0.0857025 0.091837 0.107508 0.1013388 0.0736586 0.0632360 0.0928283 0.1033580 0.069990 0.0550717 0.0919717 0.0723328 0.066681 0.0483005 0.0843469 0.057659 0.0848205 0.130373 0.08364269 0.096513 0.0795841 0.0750953 0.0637620 0.0578142 0.079803 0.0825221 0.0642360 0.0577354 0.085531 0.0170306 0.0285124 0.0357375 0.03942768 0.059576 0.0358948 0.0867007 0.0906326 0.0811003 0.0717340 0.085622 19 0.0839078 0.070922 0.00954569 36 0.1165848 0.111659 0.0049260 1.4599e-02 9.9994e-01 weaklyHypermeth 1.000000 1.0000e+00 insignificant 0.01920118 9.8772e-01 weaklyHypermeth 1.00000 1.000000 insignificant -0.01027580 0.376273 insignificant 1 insignificant 0.0839154 0.0376559 0.05494667 32 0.1215458 0.054023 0.0675229 2.4558e-12 1.0000e+00 weaklyHypermeth 8.4681e-11 1.0000e+00 weaklyHypermeth 7.0454e-09 1.0000e+00 weaklyHypermeth 7.0454e-07 1.0000e+00 weaklyHypermeth 0.03597058 3.9073e-02 weaklyHypermeth 6.1051e-01 insignificant 0.0835150 0.080368 0.00199722 38 0.1138526 0.062904 0.05094829 3.6000e-02 9.9987e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 9.7970e-02 6.9005e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.01666780 7.6013e-02 insignificant 1.0000000 insignificant 0.071012 0.0376465 4.5707e-02 32 0.119193 0.052897 0.0662959 8.2903e-06 1.0000e+00 weaklyHypermeth 1.6255e-04 1.0000000 weaklyHypermeth 1.4099e-04 1.00000000 weaklyHypermeth 4.2725e-03 1.00000 weaklyHypermeth 0.0462464 1.4108e-02 weaklyHypermeth 2.9811e-01 insignificant 0.069161 0.080358 -0.00644401 36 0.0673105 0.062904 0.00440615 4.7574e-01 7.7836e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.0717e-01 5.1063e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.02694360 0.01689353 weaklyHypermeth 0.93853 insignificant 0.0374625 0.080377 -0.0531017 32 0.035792 0.065830 -0.0300376 1.0000e+00 1.5499e-04 weaklyHypometh 1.0000e+00 2.9017e-03 weaklyHypometh 1.0000e+00 3.2445e-03 weaklyHypometh 1.0000e+00 6.5968e-02 weaklyHypometh -0.0193028 2.0698e-01 insignificant 1.0000000 insignificant chr2 85518203 85519203 7370 SH2D6 ENSG00000152292 0.097635 1601 43 0.0944560 1275 37 0.0879785 1151 36 0.0547824 1764 42 0.0886363 741 32 0.104141 1958 44 0.1187336 1148 38 0.0476693 1128 38 0.0477199 1526 33 0.0942413 1518 36 0.1129026 1125 40 0.069862 1101 38 0.0728649 1208 40 0.0621354 522 21 0.054774 1404 36 0.057607 840 34 0.0258928 963 31 0.1433511 2235 42 0.052747 787 26 0.074856 1916 48 0.0977831 649 39 0.03112376 1312 44 0.065319 1288 44 0.077917 672 37 0.063989 1186 41 0.0620588 1640 39 0.0705699 1090 43 0.071760 729 31 0.0773278 1012 36 0.0676415 1657 43 0.0491293 1489 37 0.111904 1864 43 0.0117069 1241 32 0.0345263 741 39 0.0784722 624 18 0.0378667 535 40 0.035106 650 40 0.0424454 1212 35 0.0529985 2091 43 0.1124693 1991 43 0.0392684 1467 43 0.0447906 1978 42 0.099981 2212 43 0.0524147 0.042060 0.0638816 0.0305067 0.042037 0.039653 0.0579631 0.0379767 0.0189727 0.0478842 0.0494016 0.045446 0.0203337 0.0385454 0.0480111 0.039886 0.0255671 0.0461276 0.022379 0.0230314 0.045303 0.01178850 0.027873 0.0309957 0.0153893 0.0157793 0.0202431 0.037693 0.0345063 0.0209271 0.0213381 0.047828 0.0101245 0.0176822 0.0122563 0.01491382 0.017002 0.0090876 0.0279123 0.0493933 0.0241384 0.0196549 0.031051 24 0.0456598 0.034289 0.01479349 42 0.0952872 0.084817 0.0104703 6.2982e-05 1.0000e+00 weaklyHypermeth 0.062982 1.0000e+00 weaklyHypermeth 0.00005844 9.9965e-01 weaklyHypermeth 0.05844 1.000000 weaklyHypermeth 0.00760562 0.395781 insignificant 1 insignificant 0.0456598 0.0185926 0.03249277 38 0.0952872 0.039559 0.0557280 4.5325e-12 1.0000e+00 weaklyHypermeth 1.5108e-10 1.0000e+00 weaklyHypermeth 7.8855e-12 1.0000e+00 weaklyHypermeth 1.9714e-09 1.0000e+00 weaklyHypermeth 0.03812869 5.1804e-03 weaklyHypermeth 1.5236e-01 insignificant 0.0452436 0.035538 0.00679922 43 0.0904717 0.076670 0.01380202 2.9814e-03 9.7693e-01 weaklyHypermeth 1.4907e-01 1.0000e+00 insignificant 1.2802e-02 7.7912e-01 weaklyHypermeth 7.5308e-01 1.00000000 insignificant 0.00824766 6.3535e-01 insignificant 1.0000000 insignificant 0.034348 0.0185888 1.7653e-02 38 0.087715 0.038865 0.0488497 1.8530e-04 1.0000e+00 weaklyHypermeth 2.9412e-03 1.0000000 weaklyHypermeth 1.1512e-04 1.00000000 weaklyHypermeth 3.5975e-03 1.00000 weaklyHypermeth 0.0305231 1.7468e-02 weaklyHypermeth 3.2347e-01 insignificant 0.033727 0.035527 -0.00877478 41 0.0581650 0.075166 -0.01700132 4.2293e-01 6.7725e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 7.4349e-01 1.1709e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.00064203 0.96994327 insignificant 1.00000 insignificant 0.0178464 0.035527 -0.0237628 37 0.030366 0.075166 -0.0448006 1.0000e+00 3.0079e-05 weaklyHypometh 1.0000e+00 7.7125e-04 weaklyHypometh 1.0000e+00 5.9481e-04 weaklyHypometh 1.0000e+00 2.2100e-02 weaklyHypometh -0.0298810 1.3443e-01 insignificant 1.0000000 insignificant chr2 85822503 85823503 7392 ENSG00000199687 0.653138 265 5 0.5387723 202 6 0.6910295 128 7 0.8590643 196 5 0.7157576 101 7 0.803757 322 5 0.7095078 114 5 0.7870896 153 7 0.6525054 76 3 0.7396970 95 3 0.8921147 266 7 0.742690 47 3 0.6264140 105 4 0.7203425 73 3 0.690943 105 3 0.657143 46 4 0.0000000 205 1 0.3220143 367 4 0.897174 193 3 0.868957 227 7 0.8400000 94 5 0.49717850 111 3 0.747348 134 5 0.740873 79 7 0.683473 104 5 0.8411194 224 7 0.8156984 141 5 0.852679 71 3 0.7041769 171 3 0.6461736 266 7 0.6520085 222 7 0.891456 232 7 0.0000000 115 3 0.0069498 180 3 0.0714286 85 1 0.0000000 3 0 0.054815 155 6 0.0043103 231 4 0.5412695 145 3 0.4194357 178 5 0.5912074 157 5 0.6579612 171 3 0.540351 175 5 0.8146227 0.561955 0.6960081 0.5826304 0.844016 0.765950 0.8634826 0.7514881 0.8390275 0.6912169 0.8648411 0.838915 0.5782241 0.7488133 0.6653851 0.774489 NA 0.5523631 0.697415 0.6398684 0.693939 0.41660192 0.864773 0.7740901 0.6626942 0.6183113 0.6958721 0.908911 0.7805539 0.5924494 0.5933774 0.916419 0.0000000 0.0065354 0.0018227 0.00018038 0.008335 0.0064437 0.1995596 0.4606344 0.3448755 0.4365898 0.363027 3 0.7067440 0.723634 -0.02868973 6 0.6448439 0.603713 0.0411308 5.9555e-01 1.9568e-01 insignificant 1.000000 1.0000e+00 insignificant 0.50053494 7.1239e-01 insignificant 1.00000 1.000000 insignificant -0.06427643 0.265851 lowCoverage 1 lowCoverage 0.7060976 0.0104031 0.67961387 3 0.5980513 0.076758 0.5212932 1.7915e-56 9.9997e-01 lowCoverage 8.9573e-54 1.0000e+00 lowCoverage 8.4543e-14 1.0000e+00 lowCoverage 4.2271e-11 1.0000e+00 lowCoverage 0.65548822 4.3510e-12 lowCoverage 2.1755e-09 lowCoverage 0.7057212 0.538741 0.24236073 5 0.5840440 0.540294 0.04375036 1.7722e-05 2.7928e-01 hypermethylated 1.2658e-03 1.0000e+00 hypermethylated 3.1430e-04 8.3784e-01 hypermethylated 2.4177e-02 1.00000000 hypermethylated 0.12836058 4.9767e-02 lowCoverage 0.9644885 lowCoverage 0.724026 0.0091384 7.1304e-01 3 0.664084 0.042110 0.6219747 7.4936e-54 9.9997e-01 lowCoverage 3.7468e-51 1.0000000 lowCoverage 2.8638e-13 0.99999946 lowCoverage 1.4319e-10 1.00000 lowCoverage 0.7197646 8.4663e-12 lowCoverage 8.4663e-09 lowCoverage 0.723634 0.540705 0.28183890 5 0.6037131 0.687646 -0.08393337 3.3654e-07 8.2847e-01 hypermethylated 3.3654e-05 1.0000e+00 hypermethylated 1.1527e-04 8.4862e-01 hypermethylated 1.2807e-02 1.0000000 hypermethylated 0.19263701 0.00373412 lowCoverage 0.62235 lowCoverage 0.0104031 0.539586 -0.4659212 3 0.076758 0.588676 -0.5119178 1.0000e+00 1.7549e-13 lowCoverage 1.0000e+00 2.9248e-11 lowCoverage 1.0000e+00 7.2718e-06 lowCoverage 1.0000e+00 1.3357e-03 lowCoverage -0.5271276 6.1254e-05 lowCoverage 0.0076567 lowCoverage chr2 85852603 85853603 7396 ATOH8 ENSG00000168874 0.334019 293 16 0.2936542 611 16 0.3949668 370 16 0.2935327 325 16 0.3365692 253 14 0.419417 515 16 0.3236306 277 16 0.5769988 441 16 0.3114904 270 16 0.4770936 409 16 0.4181096 637 16 0.459007 237 14 0.6475236 446 16 0.4638888 334 16 0.472810 473 16 0.397418 265 12 0.2111111 23 1 0.2509494 366 14 0.700024 716 15 0.348005 487 16 0.1996888 308 14 0.36357666 223 11 0.378797 275 16 0.388431 200 14 0.520844 201 14 0.6190565 737 16 0.4689232 549 15 0.187998 203 14 0.5759374 596 16 0.6859146 695 16 0.3493705 766 16 0.450660 560 16 0.0019767 600 16 0.0038298 704 14 0.0027074 602 12 0.0000000 84 11 0.103241 616 19 0.0009970 1099 16 0.3379068 545 14 0.3503043 459 14 0.2943930 281 14 0.3661923 444 15 0.143763 366 16 0.3163023 0.260798 0.3711606 0.2654920 0.366382 0.387914 0.3014167 0.5102854 0.3490940 0.3611172 0.3593957 0.343412 0.6684561 0.3401154 0.4488233 0.316698 0.3082048 0.2399439 0.643926 0.3261665 0.250965 0.36513891 0.371141 0.3555860 0.4149335 0.5285181 0.3766996 0.205896 0.4936501 0.6301607 0.3263213 0.381732 0.0032860 0.0046573 0.0044336 0.00000000 0.011222 0.0016856 0.2243592 0.2459569 0.2719367 0.2655125 0.143892 14 0.4271882 0.453431 -0.02475602 16 0.3478811 0.424560 -0.0766788 9.9961e-01 1.8289e-01 insignificant 1.000000 1.0000e+00 insignificant 0.99971690 4.4005e-01 insignificant 1.00000 1.000000 insignificant -0.02592227 0.627906 insignificant 1 insignificant 0.4273350 0.0040508 0.42346568 16 0.3497786 0.058103 0.2916759 4.0696e-63 1.0000e+00 hypermethylated 4.0696e-60 1.0000e+00 hypermethylated 3.5327e-31 1.0000e+00 hypermethylated 3.5327e-28 1.0000e+00 hypermethylated 0.38771888 2.4899e-11 hypermethylated 5.0257e-09 hypermethylated 0.4274631 0.250120 0.17459043 14 0.3640432 0.285280 0.07876316 2.7422e-12 9.9999e-01 weaklyHypermeth 3.4277e-10 1.0000e+00 weaklyHypermeth 8.7687e-09 9.9988e-01 weaklyHypermeth 2.9229e-06 1.00000000 weaklyHypermeth 0.10799895 5.8643e-02 insignificant 1.0000000 insignificant 0.453275 0.0043185 4.4812e-01 16 0.400416 0.076515 0.3239010 2.5550e-54 1.0000e+00 hypermethylated 2.5550e-51 1.0000000 hypermethylated 1.9184e-24 0.99999999 hypermethylated 1.9184e-21 1.00000 hypermethylated 0.4136412 5.5774e-07 hypermethylated 6.1971e-05 hypermethylated 0.453565 0.250597 0.19631327 14 0.3991919 0.289459 0.10973325 9.0259e-13 1.0000e+00 weaklyHypermeth 1.5043e-10 1.0000e+00 weaklyHypermeth 1.8556e-06 1.0000e+00 weaklyHypermeth 4.5048e-04 1.0000000 weaklyHypermeth 0.13392121 0.04441209 weaklyHypermeth 1.00000 insignificant 0.0040530 0.250358 -0.2497127 14 0.039827 0.269407 -0.2295803 1.0000e+00 1.6163e-36 hypomethylated 1.0000e+00 1.6163e-33 hypomethylated 1.0000e+00 2.4062e-18 hypomethylated 1.0000e+00 2.4062e-15 hypomethylated -0.2797199 1.0632e-03 weaklyHypometh 0.0506276 weaklyHypometh chr2 86016603 86017603 7404 ST3GAL5 ENSG00000115525 0.953872 214 4 0.8280768 306 7 0.6984127 75 7 0.9569300 124 4 0.9274376 45 5 0.920687 279 4 0.7937675 57 4 0.9608122 153 6 0.8888409 76 7 1.0000000 59 6 0.9367800 359 7 0.472222 15 0 0.9937888 123 7 0.8272727 32 4 0.992063 85 7 1.000000 15 0 1.0000000 20 2 0.9321954 255 4 0.921097 369 7 0.943395 256 4 0.9839235 79 5 1.00000000 2 0 0.938460 148 7 0.857143 54 4 1.000000 21 2 0.9510949 322 7 0.9075510 78 5 0.833333 14 0 0.9512656 203 4 0.9560519 350 6 0.8588036 404 7 0.944661 254 6 0.9471856 206 6 0.9734694 232 7 0.8873626 248 6 1.0000000 22 2 0.879388 128 7 0.9535294 347 7 0.9108137 160 4 0.9649025 257 6 0.8993506 112 4 0.9296302 135 4 0.985826 166 4 0.9071429 0.913445 0.7569444 0.9482242 0.912698 0.915009 0.7929797 0.9341128 0.9312794 1.0000000 0.9239600 0.540638 0.9914596 0.8821429 0.9781746 0.998971 0.9333266 0.9121574 0.952079 0.9100530 0.955790 0.98784956 0.902524 0.8690476 1.0000000 0.9528915 0.9421939 1.000000 0.9811705 0.9785268 0.9465367 0.901732 0.9332042 0.9494898 0.8451236 0.95319256 0.951288 0.9643151 0.9012035 0.9773942 0.9183673 0.9112442 0.961022 0 0.9194378 0.941939 -0.02192460 6 0.9144518 0.921386 -0.0069346 9.3131e-01 3.5275e-02 weaklyHypometh 1.000000 1.0000e+00 insignificant 0.97653788 2.2717e-02 weaklyHypometh 1.00000 1.000000 insignificant -0.03447473 0.301928 lowCoverage 1 lowCoverage 0.9194378 0.9315300 -0.01385496 6 0.9144518 0.932744 -0.0182921 8.9639e-01 2.7849e-03 weaklyHypometh 1.0000e+00 2.5317e-01 insignificant 9.8096e-01 1.1817e-02 weaklyHypometh 1.0000e+00 7.3854e-01 insignificant -0.04277329 2.2815e-01 lowCoverage 1.0000e+00 lowCoverage 0.9194378 0.944578 -0.02332742 4 0.9144518 0.953524 -0.03907260 9.9523e-01 7.6591e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.8736e-01 2.0659e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage -0.04072212 2.2767e-01 lowCoverage 1.0000000 lowCoverage 0.941939 0.9315300 1.4445e-02 6 0.921386 0.932744 -0.0113575 9.1069e-01 2.8053e-02 inconclusive 1.0000e+00 1.0000000 insignificant 8.5735e-01 0.15433784 insignificant 1.0000e+00 1.00000 insignificant -0.0082986 7.4927e-01 lowCoverage 1.0000e+00 lowCoverage 0.941939 0.944578 0.00074470 4 0.9213864 0.953524 -0.03213798 7.8251e-01 4.6080e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 3.9796e-01 6.9935e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage -0.00624738 0.79064780 lowCoverage 1.00000 lowCoverage 0.9315300 0.944578 -0.0048189 4 0.932744 0.953524 -0.0207805 3.1581e-01 6.9609e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 2.7298e-01 7.8413e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0020512 9.3744e-01 lowCoverage 1.0000000 lowCoverage chr2 86098503 86099503 7413 ST3GAL5 ENSG00000115525 0.895595 188 7 0.7258366 224 7 0.7242722 192 7 0.9500809 183 4 0.8612600 125 8 0.921967 292 7 0.9121778 181 7 0.8709023 202 7 0.7984372 185 7 0.8658493 205 7 0.7907433 196 7 0.766166 151 7 0.7351155 289 7 0.7604167 98 4 0.858959 233 7 0.836735 133 7 0.7800054 72 7 0.5353055 219 4 0.836507 152 7 0.919477 249 7 0.7907639 76 7 0.86027149 134 4 0.899969 223 7 0.831777 125 7 0.757525 92 4 0.7393948 226 7 0.8814399 111 6 0.750988 91 8 0.8424143 266 7 0.9150546 292 7 0.8256264 270 7 0.859945 296 7 0.6171056 179 7 0.4119743 138 7 0.3333333 124 3 0.5421769 44 3 0.679717 114 7 0.8000620 279 7 0.8008422 199 7 0.8529070 192 7 0.8313696 169 4 0.8703467 201 7 0.817860 170 7 0.8725684 0.833498 0.6387341 0.9222805 0.925575 0.900285 0.8821722 0.8213532 0.7942913 0.8842382 0.8536344 0.900476 0.7605345 0.7708100 0.7771146 0.788274 0.8951474 0.5721639 0.827539 0.8913772 0.930246 0.81669212 0.873360 0.8972878 0.7954198 0.8346636 0.8805588 0.773902 0.8094470 0.8927090 0.8510318 0.895132 0.6293454 0.4438258 0.4879003 0.53711519 0.708296 0.7984425 0.8699492 0.7957022 0.8024306 0.7986272 0.779719 4 0.8195808 0.858311 -0.04118830 7 0.8009697 0.829277 -0.0283071 9.3348e-01 4.3795e-02 weaklyHypometh 1.000000 1.0000e+00 insignificant 0.78305314 2.1719e-01 insignificant 1.00000 1.000000 insignificant -0.01230708 0.656281 insignificant 1 insignificant 0.8195808 0.6093394 0.20725962 7 0.8009697 0.572450 0.2285192 2.4953e-11 9.9998e-01 hypermethylated 7.7978e-10 1.0000e+00 hypermethylated 2.9468e-08 1.0000e+00 hypermethylated 2.1049e-06 1.0000e+00 hypermethylated 0.25322888 1.3947e-02 weaklyHypermeth 3.0319e-01 insignificant 0.8195808 0.817401 -0.00044358 7 0.8009697 0.755864 0.04510594 6.3849e-01 1.0836e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.0133e-01 3.2092e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.01737476 4.9039e-01 insignificant 1.0000000 insignificant 0.858311 0.6093394 2.4984e-01 7 0.829277 0.572450 0.2568263 9.7475e-11 9.9999e-01 hypermethylated 3.3612e-09 1.0000000 hypermethylated 8.6070e-08 0.99999955 hypermethylated 1.0759e-05 1.00000 hypermethylated 0.2655360 1.1905e-02 weaklyHypermeth 2.7687e-01 insignificant 0.858311 0.817401 0.04324015 7 0.8292768 0.755864 0.07341303 5.1331e-03 3.6254e-01 weaklyHypermeth 2.0532e-01 1.0000e+00 insignificant 1.9100e-02 3.1068e-01 weaklyHypermeth 8.6817e-01 1.0000000 insignificant -0.00506769 0.81249176 insignificant 1.00000 insignificant 0.6093394 0.817401 -0.2082501 7 0.572450 0.755864 -0.1834133 9.9939e-01 4.5311e-05 hypomethylated 1.0000e+00 1.0538e-03 hypomethylated 9.9999e-01 1.2999e-04 hypomethylated 1.0000e+00 9.2848e-03 hypomethylated -0.2706036 1.1477e-02 weaklyHypometh 0.2342171 insignificant chr2 87433903 87434903 7443 ENSG00000204745 0.727321 835 7 0.6459731 512 7 0.6287025 362 7 0.7594661 734 7 0.5705719 202 6 0.598013 1061 7 0.6561845 275 6 0.7041114 382 7 0.6274432 349 6 0.7414972 334 6 0.7351049 668 6 0.679452 154 7 0.7210699 393 6 0.5904356 76 2 0.753189 364 7 0.822593 80 4 0.7422653 351 6 0.7171868 888 7 0.710903 491 7 0.603872 982 7 0.6289124 269 7 0.63875550 406 7 0.680443 419 7 0.664104 301 6 0.755472 333 6 0.7095735 573 7 0.6776530 467 6 0.693522 163 6 0.6652366 451 7 0.6898189 604 7 0.7317857 487 7 0.739792 1050 7 0.5446739 485 7 0.5038568 516 7 0.5950048 370 6 0.6022195 200 6 0.636711 316 7 0.5451292 555 7 0.6336627 954 7 0.7353114 1197 7 0.6776230 948 7 0.7557382 954 7 0.669798 997 7 0.8612163 0.776578 0.7777218 0.9071868 0.812015 0.845586 0.7997177 0.8627277 0.8478337 0.8538451 0.8873426 0.828469 0.8848473 0.8770897 0.8820553 0.840097 0.8989036 0.8611847 0.866593 0.7770379 0.812083 0.79541931 0.864364 0.8607516 0.9138520 0.8537615 0.8306150 0.830644 0.8059142 0.8487246 0.8624882 0.883807 0.7060767 0.6462693 0.6815032 0.79632865 0.822672 0.7681892 0.7967982 0.8707957 0.8253003 0.8606329 0.824722 6 0.8369325 0.834691 -0.00508464 6 0.6603824 0.681874 -0.0214917 9.3520e-01 3.5269e-01 insignificant 1.000000 1.0000e+00 insignificant 0.79796807 5.4768e-01 insignificant 1.00000 1.000000 insignificant -0.00282121 0.882708 insignificant 1 insignificant 0.8369325 0.6920557 0.13592767 6 0.6603824 0.603893 0.0564896 3.2613e-14 9.9882e-01 weaklyHypermeth 1.2544e-12 1.0000e+00 weaklyHypermeth 2.5490e-06 9.9897e-01 weaklyHypermeth 1.0872e-04 1.0000e+00 weaklyHypermeth 0.11550204 6.3584e-04 weaklyHypermeth 2.6493e-02 weaklyHypermeth 0.8369325 0.821782 0.01188902 6 0.6603824 0.728991 -0.06860844 3.9552e-01 7.9985e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.4040e-01 8.7723e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.00765878 7.8426e-01 insignificant 1.0000000 insignificant 0.834691 0.6920557 1.4063e-01 7 0.681874 0.603893 0.0779813 3.3201e-12 9.9886e-01 weaklyHypermeth 1.3834e-10 1.0000000 weaklyHypermeth 2.1161e-06 0.99976342 weaklyHypermeth 1.2447e-04 1.00000 weaklyHypermeth 0.1183232 7.1343e-04 weaklyHypermeth 3.2429e-02 weaklyHypermeth 0.834691 0.821782 0.01760360 7 0.6818741 0.728991 -0.04711676 1.2581e-01 9.0508e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.1287e-01 8.5539e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.00483758 0.85312487 insignificant 1.00000 insignificant 0.6920557 0.821782 -0.1243691 7 0.603893 0.728991 -0.1250981 1.0000e+00 2.6104e-05 weaklyHypometh 1.0000e+00 6.8695e-04 weaklyHypometh 9.9999e-01 7.9882e-04 weaklyHypometh 1.0000e+00 2.4963e-02 weaklyHypometh -0.1231608 2.8982e-03 weaklyHypometh 0.1073413 insignificant chr2 87664003 87665003 7477 ENSG00000214354 0.242190 567 22 0.3617700 1314 23 0.4052523 644 23 0.2172907 290 19 0.3742398 461 23 0.330957 646 23 0.3133048 1009 23 0.3907155 588 23 0.2943513 653 22 0.2916382 693 22 0.3436290 1309 23 0.270843 766 22 0.5439373 634 22 0.4959965 76 5 0.559695 583 22 0.230370 762 22 0.1688687 699 20 0.3027347 366 16 0.871579 902 22 0.753358 415 15 0.3196264 341 22 0.13379499 148 8 0.270334 607 22 0.300731 287 20 0.648991 101 6 0.6958339 816 23 0.3544699 324 21 0.329156 214 19 0.2390762 570 22 0.8446994 731 23 0.4649061 759 23 0.314365 804 23 0.3285180 628 23 0.2837444 654 22 0.4007934 273 11 0.2999554 133 11 0.338197 354 21 0.2991356 627 23 0.0918076 626 23 0.1140815 1073 23 0.1883160 385 19 0.1081371 290 17 0.185129 449 20 0.3080772 0.429219 0.4664936 0.3039126 0.433792 0.425291 0.3829742 0.5087222 0.3716546 0.3736538 0.3894270 0.343763 0.6068143 NA 0.6040771 0.267221 0.2242948 0.3274281 0.894201 0.7350824 0.432172 0.15087808 0.339790 0.3811934 0.6277460 0.7373065 0.4313554 0.387125 0.3438097 0.8538202 0.5844510 0.413335 0.3268511 0.2595201 0.3530868 0.35985529 0.365628 0.2407724 0.1322910 0.1749624 0.2508533 0.1382028 0.191521 7 0.3897279 0.476057 -0.05903570 23 0.3813480 0.435593 -0.0542450 9.9999e-01 1.1465e-02 weaklyHypometh 1.000000 7.1658e-01 insignificant 0.97565185 2.7355e-01 insignificant 1.00000 1.000000 insignificant -0.02152939 0.771392 insignificant 1 insignificant 0.3897279 0.3185907 0.11285700 23 0.3813480 0.323065 0.0582831 7.2878e-06 5.3818e-01 weaklyHypermeth 1.4015e-04 1.0000e+00 weaklyHypermeth 1.3255e-04 2.8132e-01 weaklyHypermeth 3.3988e-03 1.0000e+00 weaklyHypermeth 0.06307870 1.6050e-01 insignificant 1.0000e+00 insignificant 0.3897279 0.156328 0.26700004 23 0.3813480 0.124034 0.25731441 9.7589e-34 1.0000e+00 hypermethylated 9.7589e-31 1.0000e+00 hypermethylated 2.6463e-27 1.0000e+00 hypermethylated 1.3232e-24 1.00000000 hypermethylated 0.25064168 1.1407e-05 hypermethylated 0.0028516 hypermethylated 0.476057 0.3185907 1.7222e-01 23 0.435593 0.323065 0.1125281 2.7852e-07 9.9631e-01 weaklyHypermeth 6.9630e-06 1.0000000 weaklyHypermeth 1.8903e-03 0.88366585 weaklyHypermeth 3.4695e-02 1.00000 weaklyHypermeth 0.0846081 2.0693e-01 insignificant 1.0000e+00 insignificant 0.476057 0.156328 0.32770113 23 0.4355930 0.124034 0.31155942 3.1631e-29 1.0000e+00 hypermethylated 1.5816e-26 1.0000e+00 hypermethylated 9.7516e-22 1.0000e+00 hypermethylated 4.8758e-19 1.0000000 hypermethylated 0.27217107 0.00098419 hypermethylated 0.24605 insignificant 0.3184713 0.156272 0.1478667 23 0.309604 0.118865 0.1907383 2.5598e-21 1.0000e+00 weaklyHypermeth 2.5598e-18 1.0000e+00 weaklyHypermeth 2.9602e-11 1.0000e+00 weaklyHypermeth 2.9602e-08 1.0000e+00 weaklyHypermeth 0.1875630 9.0532e-05 weaklyHypermeth 0.0082302 weaklyHypermeth chr2 87716903 87717903 7486 ENSG00000214354 0.896891 260 5 0.8722170 263 5 0.8766835 98 5 0.9422370 198 5 0.8500689 67 5 0.949295 352 5 0.8644555 131 5 0.9216667 152 5 0.8602528 190 5 0.9215286 157 5 0.8689683 141 5 0.970955 79 5 0.9161783 223 5 0.9250859 108 5 0.914309 204 5 0.938889 66 4 0.8508159 43 3 0.8759651 280 5 0.863113 148 5 0.935888 262 5 0.9909091 51 4 0.94130672 131 5 0.933333 112 5 0.920832 126 5 0.962733 75 5 0.9427699 193 5 0.7547114 136 5 0.924958 83 5 0.8716017 133 5 0.9739166 199 5 0.9367196 223 5 0.940354 252 5 0.9950000 137 5 0.9115556 108 5 1.0000000 82 4 1.0000000 26 3 0.981818 104 5 0.9580761 221 5 0.9371309 281 5 0.9255034 295 5 0.9013498 190 5 0.9276147 197 5 0.906947 244 5 0.9023216 0.881083 0.8959933 0.9428403 0.856997 0.936918 0.8780132 0.9303810 0.8612609 0.8950320 0.8715595 0.965224 0.9165527 0.9233343 0.9194876 0.955370 0.8362315 0.8773360 0.874050 0.9376976 0.983182 0.92599976 0.957302 0.9234207 0.9648654 0.9478347 0.9124512 0.917004 0.8852648 0.9670435 0.9370917 0.935852 0.9966667 0.9257481 0.9989833 1.00000000 0.983030 0.9592319 0.9481070 0.9302644 0.8954426 0.9434715 0.904500 5 0.9012274 0.932322 -0.03429797 5 0.9304661 0.880998 0.0494678 9.9762e-01 9.1735e-03 weaklyHypometh 1.000000 6.7381e-01 insignificant 0.99964107 1.5140e-02 weaklyHypometh 1.00000 1.000000 insignificant -0.02373895 0.240749 lowCoverage 1 lowCoverage 0.9011696 0.9660767 -0.06959004 5 0.9026525 0.964292 -0.0616396 9.5742e-01 1.1942e-08 weaklyHypometh 1.0000e+00 1.1942e-05 weaklyHypometh 9.9998e-01 3.2793e-08 weaklyHypometh 1.0000e+00 3.2793e-05 weaklyHypometh -0.07363516 1.6214e-03 lowCoverage 5.7410e-02 lowCoverage 0.9011696 0.924606 -0.01955622 5 0.9026525 0.920759 -0.01810667 9.6043e-01 6.3033e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6685e-01 1.1336e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.01893595 9.3304e-02 lowCoverage 1.0000000 lowCoverage 0.932749 0.9660767 -3.4383e-02 5 0.933398 0.964292 -0.0308946 8.8320e-01 2.0536e-04 weaklyHypometh 1.0000e+00 0.0513406 weaklyHypometh 9.9893e-01 0.00011586 weaklyHypometh 1.0000e+00 0.11586 insignificant -0.0498962 4.2733e-02 lowCoverage 6.1047e-01 lowCoverage 0.932749 0.924606 0.01832089 5 0.9333976 0.920759 0.01263838 1.2287e-01 8.0967e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.1883e-01 9.7742e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.00480300 0.80285253 lowCoverage 1.00000 lowCoverage 0.9660767 0.924606 0.0536548 5 0.964292 0.920759 0.0435330 3.9486e-06 9.8470e-01 weaklyHypermeth 8.5232e-04 1.0000e+00 weaklyHypermeth 2.3886e-05 9.9999e-01 weaklyHypermeth 6.2828e-03 1.0000e+00 weaklyHypermeth 0.0546992 9.9600e-03 lowCoverage 0.2119160 lowCoverage chr2 87902303 87903303 7497 RGPD2 ENSG00000185304 0.760942 285 5 0.7399065 121 5 0.6748973 118 5 0.7849802 94 5 0.7516239 57 5 0.705882 18 1 0.7711148 106 5 0.8093651 97 5 0.7542857 147 5 0.7286631 112 5 0.7712576 165 5 0.709400 93 5 0.7393244 129 5 NA 0 0 0.831217 144 5 0.759700 118 5 0.7083333 134 5 0.7984412 125 5 0.705989 155 5 0.411765 17 1 0.5979021 56 5 0.83682540 51 5 0.775722 127 5 0.739888 93 5 0.810303 51 5 0.8077965 150 5 0.8317460 43 5 0.817857 39 5 0.6670629 68 5 0.8002565 158 5 0.8184871 156 5 0.875000 20 1 0.7309804 88 5 0.6400000 108 5 0.8392510 155 5 0.7411111 41 4 0.723377 52 5 0.7402424 126 5 0.7392300 176 5 0.7045879 255 5 0.7734316 194 5 0.7759183 179 5 0.820948 148 5 0.7633574 0.735608 0.6699654 0.7879457 0.754033 0.769774 0.7712181 0.8101080 0.7547242 0.7395122 0.7756193 0.721476 0.7489231 NA 0.8310515 0.773066 0.7059161 0.7899373 0.708009 NA 0.628828 0.83607284 0.775139 0.7439940 0.8081372 0.8059664 0.8336153 0.819162 0.6761901 0.7951907 0.8218929 0.869924 0.7293122 0.6332487 0.8340643 0.74238579 0.708386 0.7320628 0.7409583 0.7073209 0.7816026 0.7772457 0.816241 5 0.7700224 0.791502 -0.03200169 5 0.7504396 0.782148 -0.0317084 8.8585e-01 1.0376e-01 insignificant 1.000000 1.0000e+00 insignificant 0.98781941 5.5948e-02 insignificant 1.00000 1.000000 insignificant -0.04909230 0.116272 lowCoverage 1 lowCoverage 0.7700224 0.7719298 0.00132354 5 0.7504396 0.745452 0.0049881 3.1095e-02 4.8269e-01 weaklyHypermeth 3.0358e-01 1.0000e+00 insignificant 2.8974e-02 5.0550e-01 weaklyHypermeth 3.8124e-01 1.0000e+00 insignificant -0.00334862 9.2023e-01 lowCoverage 1.0000e+00 lowCoverage 0.7700224 0.800420 -0.01374417 5 0.7504396 0.758080 -0.00764042 6.6362e-01 1.9369e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.5192e-01 3.4058e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.03034491 2.9654e-01 lowCoverage 1.0000000 lowCoverage 0.791502 0.7719298 3.5978e-02 5 0.782148 0.745452 0.0366964 7.3498e-03 8.5601e-01 weaklyHypermeth 8.5463e-02 1.0000000 weaklyHypermeth 6.2988e-03 0.98806182 weaklyHypermeth 1.0326e-01 1.00000 insignificant 0.0457437 2.0738e-01 lowCoverage 1.0000e+00 lowCoverage 0.791502 0.800420 0.02115597 5 0.7821479 0.758080 0.02406795 2.9207e-01 4.6843e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.6641e-01 8.6123e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.01874739 0.54076051 lowCoverage 1.00000 lowCoverage 0.7719298 0.800420 -0.0157485 5 0.745452 0.758080 -0.0126285 7.5019e-01 1.0728e-01 insignificant 1.0000e+00 9.7233e-01 insignificant 7.8176e-01 2.4291e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0269963 4.2705e-01 lowCoverage 1.0000000 lowCoverage chr2 91109203 91110203 7526 ENSG00000213356 0.724937 539 7 0.6422626 355 7 0.6116630 243 6 0.7730504 537 7 0.6953214 151 6 0.700165 727 7 0.5386696 174 5 0.6911304 255 6 0.7129095 260 6 0.7528288 195 6 0.7459900 457 6 0.765162 75 6 0.8900861 315 6 0.9791667 52 1 0.709134 265 6 0.619666 55 2 0.6743404 296 6 0.7035462 680 7 0.883858 357 6 0.776424 680 6 0.6507950 154 6 0.65313229 306 6 0.714265 284 6 0.660683 207 6 0.747877 250 6 0.7144173 369 6 0.5526113 284 6 0.577976 97 5 0.5723664 376 6 0.6432248 358 7 0.7353494 374 7 0.737882 733 7 0.5476057 295 7 0.4688701 353 6 0.6048270 183 5 0.5264694 152 6 0.585498 188 6 0.5630416 389 6 0.6085818 678 7 0.7134715 848 6 0.6968577 611 6 0.7046860 684 6 0.717583 697 7 0.8662447 0.795263 0.7928200 0.9249486 0.873077 0.869044 0.7676754 0.8128750 0.8224821 0.9285947 0.8797294 0.790930 0.9085974 0.8901616 0.8816145 0.757546 0.8684745 0.8722703 0.908837 0.8387638 0.858294 0.82867264 0.909615 0.8524045 0.8821190 0.8767005 0.7991343 0.767799 0.8304766 0.8888910 0.8830268 0.886021 0.7414106 0.6772309 0.7029158 0.76664726 0.815870 0.8174432 0.7917175 0.8810455 0.8697452 0.8512643 0.869464 6 0.8522795 0.851002 -0.00268020 6 0.6828557 0.649299 0.0335568 4.6812e-01 6.1428e-01 insignificant 1.000000 1.0000e+00 insignificant 0.29452150 8.4571e-01 insignificant 1.00000 1.000000 insignificant 0.06613387 0.036083 weaklyHypermeth 1 insignificant 0.8523852 0.7153846 0.13526054 6 0.7089779 0.534406 0.1745721 4.5965e-16 1.0000e+00 weaklyHypermeth 1.9152e-14 1.0000e+00 weaklyHypermeth 8.7900e-07 9.9998e-01 weaklyHypermeth 4.6263e-05 1.0000e+00 weaklyHypermeth 0.18013019 9.9111e-06 weaklyHypermeth 6.7067e-04 weaklyHypermeth 0.8523852 0.836271 0.01460281 6 0.7089779 0.688685 0.02029262 3.0725e-01 9.5506e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.7855e-01 9.7399e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.04127949 1.9443e-01 insignificant 1.0000000 insignificant 0.852273 0.7153846 1.3720e-01 6 0.706342 0.534406 0.1719357 3.7884e-12 1.0000e+00 weaklyHypermeth 1.5154e-10 1.0000000 weaklyHypermeth 3.8264e-06 0.99999660 weaklyHypermeth 1.8221e-04 1.00000 weaklyHypermeth 0.1139963 1.1314e-03 weaklyHypermeth 4.7903e-02 weaklyHypermeth 0.852273 0.836271 0.01734054 6 0.7063416 0.688685 0.01765628 3.6899e-01 9.6574e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.3205e-01 9.1611e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.02485438 0.39762685 insignificant 1.00000 insignificant 0.7153846 0.836271 -0.1215790 6 0.534406 0.688685 -0.1542795 1.0000e+00 6.8140e-07 weaklyHypometh 1.0000e+00 2.9626e-05 weaklyHypometh 1.0000e+00 3.2180e-04 weaklyHypometh 1.0000e+00 1.4627e-02 weaklyHypometh -0.1388507 8.6960e-04 weaklyHypometh 0.0457685 weaklyHypometh chr2 94766203 94767203 7538 ENSG00000213355 0.823783 277 14 0.7880549 138 11 0.5728828 81 7 0.8199606 208 13 0.7133165 69 6 0.835843 263 13 0.7342857 74 7 0.8788221 147 12 0.6092593 50 8 0.8390873 85 7 0.7244003 231 14 0.809524 53 2 0.9034864 67 8 0.8481481 55 5 0.790909 71 6 0.512500 35 4 0.5000000 16 2 0.7089498 268 11 0.895833 128 12 0.840525 239 13 0.8679487 30 3 0.85786436 80 7 0.698563 142 11 0.837500 65 9 0.884908 329 12 0.7617727 167 12 0.8459207 96 7 0.696667 44 3 0.7603106 98 6 0.7482639 166 6 0.7218254 160 11 0.821608 217 14 0.5848458 214 13 0.6858143 160 12 0.6780136 248 10 0.8327228 117 9 0.613454 145 12 0.6891887 235 12 0.8120790 230 9 0.8398069 235 12 0.8459173 281 14 0.7935556 147 9 0.764206 245 12 0.7835408 0.753743 0.6163727 0.7651827 0.758462 0.798789 0.7778622 0.8444927 0.7059340 0.8294917 0.7304524 0.826241 0.8652060 0.8921042 0.7904578 0.689650 NA 0.8101220 0.905437 0.8398183 0.804997 0.79354951 0.823959 0.8297872 0.8327206 0.7450395 0.8048354 0.683806 0.7596985 0.8192146 0.7698919 0.807495 0.6220910 0.6476017 0.6702144 0.71766186 0.654659 0.6970201 0.7647492 0.7768834 0.7967913 0.7600236 0.792556 0 0.8001570 0.837312 -0.02059366 12 0.7055458 0.778206 -0.0726605 9.3857e-01 5.7542e-01 insignificant 1.000000 1.0000e+00 insignificant 0.82321247 8.6218e-01 insignificant 1.00000 1.000000 insignificant -0.03445085 0.314950 insignificant 1 insignificant 0.8008641 0.6997319 0.12688517 12 0.7531649 0.605844 0.1473209 2.1623e-06 1.0000e+00 weaklyHypermeth 4.5048e-05 1.0000e+00 weaklyHypermeth 3.1631e-05 1.0000e+00 weaklyHypermeth 9.8848e-04 1.0000e+00 weaklyHypermeth 0.07680532 1.1039e-01 insignificant 1.0000e+00 insignificant 0.8005507 0.825132 0.00579399 12 0.7583220 0.826481 -0.06815943 1.7964e-01 5.1582e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.3821e-01 6.4682e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.05363437 9.9744e-02 insignificant 1.0000000 insignificant 0.841502 0.7019749 1.4896e-01 12 0.828961 0.689572 0.1393888 4.6842e-08 1.0000e+00 weaklyHypermeth 1.3012e-06 1.0000000 weaklyHypermeth 1.1599e-03 0.99999997 weaklyHypermeth 2.2307e-02 1.00000 weaklyHypermeth 0.1112562 2.3703e-02 weaklyHypermeth 4.2326e-01 insignificant 0.838812 0.824978 0.03235525 12 0.7995491 0.816274 -0.01672540 2.3591e-02 3.8151e-01 weaklyHypermeth 7.4662e-01 1.0000e+00 insignificant 2.4428e-01 6.1556e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.01918353 0.45179518 insignificant 1.00000 insignificant 0.7005396 0.824824 -0.1187154 12 0.630748 0.816274 -0.1855260 9.9738e-01 2.2537e-04 weaklyHypometh 1.0000e+00 4.0245e-03 weaklyHypometh 9.9988e-01 3.0778e-03 weaklyHypometh 1.0000e+00 6.5924e-02 weaklyHypometh -0.1304397 1.1895e-02 weaklyHypometh 0.2379052 insignificant chr2 96192103 96193103 7560 DUSP2 ENSG00000158050 0.800644 187 10 0.6347673 155 10 0.6173595 199 10 0.7103730 116 7 0.6683379 187 10 0.753264 272 10 0.6357477 211 10 0.7084530 172 10 0.6349376 175 10 0.8445679 143 10 0.8714431 320 10 0.778276 130 7 0.7847054 200 10 0.7250000 31 4 0.797036 157 10 0.483350 137 6 0.7204152 127 6 0.7766729 162 7 0.768277 195 10 0.633776 188 9 0.7334711 86 6 0.81486111 60 5 0.815495 170 10 0.682476 102 8 0.717262 58 5 0.7046019 196 10 0.5931126 100 7 0.690206 74 7 0.7403430 138 10 0.7642066 184 10 0.8041020 205 10 0.670399 289 8 0.5845408 167 10 0.7747835 191 9 0.6406167 386 10 0.6766667 34 2 0.629840 121 10 0.6064365 145 10 0.8000505 134 8 0.7101261 145 9 0.8435284 194 8 0.7885602 144 9 0.879099 150 9 0.7392560 0.717693 0.6190298 0.7996673 0.805595 0.782638 0.7175192 0.7304263 0.6785298 0.8365073 0.8183225 0.789603 0.7389928 0.8259603 0.7410789 0.621904 0.7893873 0.8028301 0.775725 0.7418015 0.764979 0.81836118 0.794948 0.7218590 0.8416375 0.7619943 0.7043693 0.836457 0.7908064 0.8048974 0.8282126 0.756358 0.6821091 0.7469541 0.6434456 0.67455808 0.726096 0.6676328 0.7665213 0.7794209 0.8306232 0.7743015 0.831602 2 0.7826212 0.792419 -0.02265012 10 0.7151213 0.691648 0.0234737 9.1214e-01 1.9106e-02 weaklyHypometh 1.000000 1.0000e+00 insignificant 0.63734057 5.8388e-02 insignificant 1.00000 1.000000 insignificant -0.01017438 0.720840 insignificant 1 insignificant 0.7825585 0.7040230 0.07313181 10 0.6913814 0.583033 0.1083487 5.7313e-07 9.9647e-01 weaklyHypermeth 1.2459e-05 1.0000e+00 weaklyHypermeth 6.6601e-03 9.9918e-01 weaklyHypermeth 1.1483e-01 1.0000e+00 insignificant 0.06522276 8.5157e-02 insignificant 1.0000e+00 insignificant 0.7835410 0.790091 -0.04217410 9 0.7087798 0.758385 -0.04960571 7.7766e-01 3.2967e-03 weaklyHypometh 1.0000e+00 2.7473e-01 insignificant 8.1495e-01 2.1940e-02 weaklyHypometh 1.0000e+00 0.93408058 insignificant -0.08690274 3.6387e-02 weaklyHypometh 0.9372399 insignificant 0.793373 0.7040230 1.1485e-01 10 0.749285 0.583033 0.1662522 1.0967e-07 9.9917e-01 weaklyHypermeth 2.8120e-06 1.0000000 weaklyHypermeth 6.5071e-04 0.99985067 weaklyHypermeth 1.4146e-02 1.00000 weaklyHypermeth 0.0753971 4.8985e-02 weaklyHypermeth 6.7841e-01 insignificant 0.793249 0.790091 -0.01102087 9 0.7264926 0.758385 -0.03189285 3.5122e-01 2.2800e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.0365e-01 1.9035e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.07672836 0.05657782 insignificant 1.00000 insignificant 0.7046980 0.790091 -0.1058598 9 0.636036 0.758385 -0.1223497 9.9972e-01 8.1589e-06 weaklyHypometh 1.0000e+00 2.3311e-04 weaklyHypometh 9.9989e-01 1.3030e-03 weaklyHypometh 1.0000e+00 3.5673e-02 weaklyHypometh -0.1521255 4.1833e-03 weaklyHypometh 0.1258701 insignificant chr2 96861803 96862803 7586 CNNM3 ENSG00000168763 0.337590 138 6 0.4557401 137 5 0.4499134 92 5 0.4708372 146 6 0.1615497 68 5 0.620376 170 5 0.2901395 91 5 0.3484804 123 5 0.3313846 89 5 0.6069444 71 2 0.6759306 148 5 0.382937 64 2 0.4541209 88 5 0.3490991 58 2 0.400041 76 5 0.055556 12 2 0.0000000 10 1 0.3587767 272 5 0.420849 147 5 0.493439 122 5 0.5875000 68 5 0.28735632 51 2 0.364781 96 5 0.424819 59 2 0.441795 316 5 0.3620370 138 5 0.3228404 82 5 0.226560 85 6 0.5454299 58 5 0.4590051 170 5 0.4560099 178 5 0.698718 94 5 0.5814229 69 5 0.5202686 117 5 0.8260870 71 1 0.5070707 35 5 0.498969 58 6 0.3718383 197 6 0.3899814 170 6 0.4472819 184 6 0.4037037 127 6 0.4947612 102 5 0.406143 133 6 0.2403120 0.313585 0.3021554 0.2562842 0.098050 0.466922 0.1775761 0.2896948 0.2462558 0.3504518 0.5800636 0.299053 0.2943781 0.2806496 0.2767724 0.225848 0.1525549 0.2755655 0.167087 0.2459447 0.420331 0.16597424 0.236251 0.2692509 0.2761374 0.3233936 0.2543319 0.142036 0.4132367 0.3110211 0.2215100 0.479634 0.3971594 0.4263023 0.7604780 0.34921504 0.354350 0.3156161 0.1751682 0.1816137 0.2447390 0.2506737 0.229082 2 0.3768868 0.373745 -0.00748715 5 0.5662534 0.576697 -0.0104440 9.6138e-01 8.3924e-01 insignificant 1.000000 1.0000e+00 insignificant 0.99221772 6.8977e-01 insignificant 1.00000 1.000000 insignificant -0.04821919 0.379287 lowCoverage 1 lowCoverage 0.3762984 0.4808044 -0.11286569 5 0.4423259 0.401629 0.0406966 3.3326e-01 1.6665e-06 weaklyHypometh 1.0000e+00 5.5551e-04 weaklyHypometh 8.1130e-01 1.5441e-03 weaklyHypometh 1.0000e+00 2.0108e-01 insignificant -0.16775764 4.5393e-02 lowCoverage 6.8778e-01 lowCoverage 0.3762984 0.369382 0.05534762 5 0.4423259 0.455052 -0.01272599 1.7825e-02 5.0112e-01 weaklyHypermeth 6.8558e-01 1.0000e+00 insignificant 7.6913e-02 5.3808e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.04518910 2.9914e-01 lowCoverage 1.0000000 lowCoverage 0.372845 0.4808044 -1.0592e-01 5 0.455754 0.401629 0.0541246 4.0207e-01 4.3293e-06 weaklyHypometh 1.0000e+00 0.0043293 weaklyHypometh 5.3503e-01 0.00443022 weaklyHypometh 1.0000e+00 0.88604 insignificant -0.1195385 1.3437e-01 lowCoverage 1.0000e+00 lowCoverage 0.372845 0.369382 0.06137596 5 0.4557539 0.455052 0.00070205 3.9041e-02 3.4608e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 1.9714e-01 5.2986e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.00303009 0.94460099 lowCoverage 1.00000 lowCoverage 0.4808044 0.369382 0.1706479 5 0.401629 0.455052 -0.0534226 1.3808e-05 7.0285e-01 weaklyHypermeth 1.9726e-03 1.0000e+00 weaklyHypermeth 1.2675e-02 8.3139e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.1225685 1.0715e-01 lowCoverage 1.0000000 lowCoverage chr2 96885003 96886003 7587 ANKRD23 ENSG00000163126 0.618978 202 11 0.5020386 159 9 0.5973898 95 9 0.5509952 214 10 0.5676852 124 6 0.686149 185 5 0.5431722 169 9 0.6583267 171 9 0.6407218 115 7 0.5377646 112 9 0.6212779 215 9 0.631129 83 6 0.6597271 204 9 0.6654321 134 9 0.627799 134 7 0.610000 85 6 0.6385621 82 4 0.6188771 263 11 0.634274 112 9 0.661993 156 5 0.5666667 58 5 0.78000000 28 2 0.630644 129 9 0.592687 69 5 0.675595 87 8 0.6584967 178 9 0.5167521 60 5 0.335317 27 2 0.6251540 156 7 0.6483992 133 9 0.6384615 145 9 0.691240 219 5 0.5633390 134 10 0.6129630 81 5 0.4672960 100 7 0.5777778 38 4 0.589694 122 9 0.6818250 143 5 0.6187398 176 9 0.6742670 191 9 0.6336808 198 9 0.7583488 225 9 0.808883 229 9 0.7953041 0.778122 0.7064971 0.7434181 0.688758 0.740721 0.7611022 0.7510890 0.6803517 0.7367853 0.7958210 0.756237 0.7304098 0.7734493 0.7485623 0.782524 0.8020814 0.7392299 0.801049 0.8423267 0.861489 0.76549589 0.749890 0.7998151 0.8262829 0.7862116 0.6888370 0.411466 0.7169034 0.7847158 0.8247573 0.791589 0.7542360 0.7262136 0.7202080 0.77411003 0.707118 0.7598325 0.8053733 0.8375092 0.7842666 0.8270765 0.844495 2 0.7382216 0.769589 -0.02087078 9 0.5692424 0.578590 -0.0093481 6.9364e-01 1.4968e-01 insignificant 1.000000 1.0000e+00 insignificant 0.89946531 3.7850e-01 insignificant 1.00000 1.000000 insignificant 0.00033019 0.992257 insignificant 1 insignificant 0.7395210 0.7071197 0.01791438 9 0.6157925 0.607406 0.0083865 5.3227e-02 4.2332e-01 insignificant 4.8388e-01 1.0000e+00 insignificant 2.5501e-01 4.6720e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03146550 3.4076e-01 insignificant 1.0000e+00 insignificant 0.7400601 0.812561 -0.06608835 9 0.5981643 0.688241 -0.09007693 9.5184e-01 8.5339e-04 weaklyHypometh 1.0000e+00 1.1543e-01 insignificant 9.8450e-01 6.1600e-03 weaklyHypometh 1.0000e+00 0.41393995 insignificant -0.08516927 7.9667e-02 insignificant 1.0000000 insignificant 0.770850 0.7071197 4.3990e-02 9 0.609912 0.607406 0.0025061 1.2574e-02 7.0759e-01 weaklyHypermeth 1.3971e-01 1.0000000 insignificant 2.1971e-01 0.73613205 insignificant 1.0000e+00 1.00000 insignificant 0.0311353 4.7596e-01 insignificant 1.0000e+00 insignificant 0.773011 0.812561 -0.04236819 9 0.6522198 0.688241 -0.03602143 6.3865e-01 1.4686e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 8.0877e-01 5.7377e-02 insignificant 1.0000e+00 1.0000000 insignificant -0.08549945 0.10734170 insignificant 1.00000 insignificant 0.7066451 0.812377 -0.0918479 9 0.574690 0.662261 -0.0875715 8.2181e-01 1.3571e-04 weaklyHypometh 1.0000e+00 2.6097e-03 weaklyHypometh 9.0013e-01 6.7484e-03 weaklyHypometh 1.0000e+00 1.0786e-01 insignificant -0.1166348 3.6560e-02 weaklyHypometh 0.5456692 insignificant chr2 96910103 96911103 7588 FAM178B ENSG00000168754 0.701042 519 12 0.7083415 399 12 0.6344899 233 12 0.7200932 312 12 0.6598063 182 12 0.715945 489 12 0.5674865 209 12 0.7089643 304 12 0.6682309 216 8 0.6870931 243 12 0.7712479 517 12 0.736530 157 8 0.7264568 331 8 0.7033730 75 6 0.825904 338 12 0.825064 164 8 0.6726224 153 7 0.7460321 352 12 0.787960 360 12 0.727652 381 12 0.8556023 161 10 0.67021721 134 6 0.764542 232 12 0.600741 115 11 0.921676 137 12 0.7231793 390 12 0.7089152 208 11 0.679480 134 8 0.8009619 361 12 0.7088114 413 12 0.7583054 454 12 0.784786 499 12 0.7388246 218 12 0.7863530 258 12 0.7100047 238 12 0.6701389 90 7 0.628352 173 8 0.7254684 467 12 0.7118714 353 12 0.7289252 403 12 0.7881130 384 12 0.8067626 403 12 0.778026 313 12 0.7736686 0.769382 0.7049346 0.7635903 0.770285 0.794808 0.7025606 0.8055730 0.6961959 0.8154198 0.8137347 0.829236 0.7815815 0.7928263 0.8223458 0.838554 0.7407368 0.8063813 0.867782 0.7754468 0.830731 0.71582865 0.763635 0.7073638 0.9288959 0.7813744 0.6837909 0.711539 0.8379615 0.8082094 0.8016978 0.810387 0.7450840 0.7644168 0.7145866 0.69897377 0.643073 0.6638793 0.7812606 0.7859637 0.8117546 0.8138720 0.799300 8 0.7750253 0.782582 0.00319651 12 0.7021071 0.714454 -0.0123467 6.2708e-01 4.8685e-01 insignificant 1.000000 1.0000e+00 insignificant 0.97069152 3.9163e-01 insignificant 1.00000 1.000000 insignificant -0.03338474 0.256725 insignificant 1 insignificant 0.7753036 0.7036011 0.07926822 12 0.7454158 0.730690 0.0147258 3.0117e-06 6.0662e-01 weaklyHypermeth 5.9053e-05 1.0000e+00 weaklyHypermeth 1.3090e-02 6.4152e-01 weaklyHypermeth 1.8971e-01 1.0000e+00 insignificant 0.00485980 8.5753e-01 insignificant 1.0000e+00 insignificant 0.7750253 0.784483 0.00587638 12 0.7021071 0.768306 -0.06619936 8.7758e-01 1.0448e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6237e-01 1.2048e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.04802303 6.2516e-02 insignificant 1.0000000 insignificant 0.782864 0.7036011 6.9803e-02 12 0.748503 0.730690 0.0178135 1.1728e-04 8.9563e-01 weaklyHypermeth 1.9878e-03 1.0000000 weaklyHypermeth 1.2586e-02 0.91064313 weaklyHypermeth 1.7726e-01 1.00000 insignificant 0.0382445 2.7325e-01 insignificant 1.0000e+00 insignificant 0.782582 0.784483 -0.00696586 12 0.7144538 0.768306 -0.05385263 6.7569e-01 4.7865e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.8430e-01 6.9807e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.01463829 0.64214392 insignificant 1.00000 insignificant 0.7036011 0.784324 -0.0832471 12 0.730690 0.754372 -0.0236822 2.5831e-01 1.1818e-03 weaklyHypometh 1.0000e+00 1.7379e-02 weaklyHypometh 7.8979e-01 1.4007e-02 weaklyHypometh 1.0000e+00 1.9728e-01 insignificant -0.0528828 1.0040e-01 insignificant 1.0000000 insignificant chr2 96961603 96962603 7593 FAM178B ENSG00000168754 0.837504 364 10 0.6970129 264 10 0.7421309 162 8 0.8745924 347 10 0.7500000 91 6 0.775612 396 10 0.6804014 106 10 0.8286340 142 10 0.6640603 57 5 0.7968915 65 8 0.8152971 256 10 0.675000 29 2 0.8429675 121 9 0.7579606 83 8 0.760868 104 8 0.855000 30 2 0.8518519 20 0 0.6598080 394 10 0.777463 151 9 0.783977 318 10 0.6388889 42 2 0.84356061 73 6 0.834988 203 10 0.836797 70 5 0.698566 89 8 0.8062060 234 10 0.6911111 47 4 0.541453 45 3 0.8160880 132 8 0.7633346 212 10 0.8351285 224 10 0.831703 351 10 0.6299926 170 10 0.8246738 104 10 0.7016403 187 10 0.8981481 28 1 0.583105 103 4 0.7488818 319 10 0.8026533 324 10 0.8886986 354 10 0.7942236 367 10 0.8704509 201 9 0.814698 329 10 0.9081789 0.802610 0.8059982 0.8946599 0.872890 0.873526 0.6761960 0.8365255 0.7343685 0.8299679 0.8497075 0.763031 0.8848241 0.8511334 0.8405329 0.925949 0.8909815 0.8454735 0.895903 0.8957903 0.852321 0.85263713 0.837667 0.8630802 0.8484514 0.9089948 0.7540787 0.776266 0.8341260 0.8737007 0.8868163 0.855476 0.7746598 0.8594894 0.8597918 0.92357816 0.606547 0.7918685 0.8386433 0.8973628 0.8363403 0.8993304 0.898934 2 0.8468571 0.850087 -0.00561575 10 0.7324053 0.720356 0.0120491 4.9745e-01 4.9772e-01 insignificant 1.000000 1.0000e+00 insignificant 0.47402054 4.6836e-01 insignificant 1.00000 1.000000 insignificant 0.00986631 0.762355 insignificant 1 insignificant 0.8477449 0.7497256 0.08039803 10 0.7537010 0.714786 0.0389148 6.5617e-05 9.9400e-01 weaklyHypermeth 1.0583e-03 1.0000e+00 weaklyHypermeth 1.1978e-01 9.8221e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.04027803 4.5658e-01 insignificant 1.0000e+00 insignificant 0.8472103 0.873651 -0.02273223 10 0.7418628 0.822266 -0.08040360 9.7868e-01 1.0736e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.1822e-01 1.7711e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.06279314 2.7912e-02 weaklyHypometh 0.9177124 insignificant 0.850816 0.7497256 8.2064e-02 10 0.775445 0.714786 0.0606590 5.9833e-04 9.9856e-01 weaklyHypermeth 8.5475e-03 1.0000000 weaklyHypermeth 4.6834e-02 0.92892926 weaklyHypermeth 5.2623e-01 1.00000 insignificant 0.0304117 6.0069e-01 insignificant 1.0000e+00 insignificant 0.850320 0.873651 -0.01607358 10 0.7182388 0.822266 -0.10402760 9.6556e-01 3.4423e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.3857e-01 3.0982e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.07265945 0.05019506 insignificant 1.00000 insignificant 0.7491749 0.873644 -0.1173872 10 0.688858 0.819248 -0.1303904 9.9996e-01 9.1892e-04 weaklyHypometh 1.0000e+00 1.3715e-02 weaklyHypometh 9.9904e-01 1.3142e-02 weaklyHypometh 1.0000e+00 1.9327e-01 insignificant -0.1030712 9.0773e-02 insignificant 1.0000000 insignificant chr2 97692864 97693864 7605 ENSG00000201806 0.798350 267 13 0.7065834 184 12 0.6621524 119 12 0.7003698 130 12 0.7225419 116 6 0.749295 339 12 0.7014922 148 11 0.7383818 138 10 0.7811248 128 12 0.5610380 126 9 0.7433964 256 12 0.615873 79 10 0.7323669 260 12 NA 0 0 0.779587 166 12 0.507738 78 8 0.6432870 77 8 0.7801282 84 11 0.804380 204 12 0.767417 405 12 0.6195106 76 6 0.68541667 124 10 0.693025 188 11 0.734852 93 7 0.699306 45 2 0.7170008 291 13 0.7225721 124 11 0.716909 85 3 0.7024934 171 9 0.6962176 241 13 0.6982672 247 13 0.787436 384 13 0.6880378 207 7 0.6890263 197 12 0.6360172 274 13 0.7500518 132 9 0.645147 122 7 0.7397037 259 13 0.7899157 278 9 0.7758230 314 13 0.7771823 195 11 0.7072038 218 8 0.813259 279 12 0.7975958 0.725257 0.6904518 0.7208081 0.731354 0.787474 0.7164840 0.7572369 0.8088321 0.5998233 0.7694437 0.616635 0.7393202 NA 0.8033131 0.541101 0.6008554 0.8141481 0.776203 0.7760410 0.638896 0.72581481 0.708974 0.7723629 0.7162963 0.7581603 0.7562303 0.716090 0.7592235 0.7753525 0.7356921 0.784672 0.7047762 0.6809750 0.6912129 0.73243627 0.669353 0.7417465 0.8053160 0.8153852 0.8200121 0.7890294 0.820001 1 0.7408870 0.753021 0.00097684 12 0.6862650 0.712672 -0.0264072 4.1838e-01 2.3000e-01 insignificant 1.000000 1.0000e+00 insignificant 0.10849092 9.9535e-02 insignificant 1.00000 1.000000 insignificant 0.00420580 0.847242 insignificant 1 insignificant 0.7415254 0.6876574 0.05069739 12 0.7150652 0.657252 0.0578134 1.7854e-03 9.7236e-01 weaklyHypermeth 2.2317e-02 1.0000e+00 weaklyHypermeth 6.3197e-02 9.5298e-01 insignificant 7.0219e-01 1.0000e+00 insignificant 0.01895902 4.8793e-01 insignificant 1.0000e+00 insignificant 0.7415254 0.774922 -0.05282228 11 0.7150652 0.720993 -0.00592793 9.4870e-01 1.0121e-02 weaklyHypometh 1.0000e+00 5.6225e-01 insignificant 9.9518e-01 2.1666e-02 weaklyHypometh 1.0000e+00 0.93408058 insignificant -0.06238722 2.9085e-02 weaklyHypometh 0.9177124 insignificant 0.753021 0.6866554 5.3708e-02 12 0.712672 0.626145 0.0865272 2.0370e-03 9.9717e-01 weaklyHypermeth 2.6116e-02 1.0000000 weaklyHypermeth 2.0114e-02 0.89642184 weaklyHypermeth 2.6122e-01 1.00000 insignificant 0.0147532 5.2270e-01 insignificant 1.0000e+00 insignificant 0.753021 0.775316 -0.05807218 11 0.7126721 0.716849 -0.00417712 9.8362e-01 4.8240e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9057e-01 2.2904e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant -0.06659302 0.01433883 weaklyHypometh 0.93853 insignificant 0.6876574 0.774922 -0.1099738 12 0.657252 0.720993 -0.0637413 9.9859e-01 6.4442e-04 weaklyHypometh 1.0000e+00 1.0229e-02 weaklyHypometh 9.9996e-01 1.2329e-02 weaklyHypometh 1.0000e+00 1.8801e-01 insignificant -0.0813462 1.2327e-02 weaklyHypometh 0.2417038 insignificant chr2 98897464 98898464 7636 ENSG00000201070 0.918987 292 8 0.8965226 332 9 0.8709466 268 9 0.9113801 278 9 0.9009917 197 9 0.929023 411 9 0.8423591 192 6 0.8803019 318 9 0.8862186 241 9 0.9196609 235 9 0.9104485 312 9 0.875841 163 9 0.9460640 335 9 0.9120691 202 9 0.922242 342 9 0.596192 137 9 0.7265386 54 2 0.8892682 318 9 0.876076 343 9 0.882464 285 9 0.9731481 77 6 0.85691030 151 8 0.931425 256 9 0.945743 157 9 0.933171 125 8 0.9557572 378 9 0.8386407 264 9 0.987024 160 6 0.9272850 315 9 0.9399356 433 9 0.9178500 405 7 0.934012 394 9 0.8699334 249 8 0.8735675 169 8 0.5731707 293 4 0.8441558 50 2 0.895710 234 9 0.9286443 284 9 0.8960863 360 9 0.9283574 272 8 0.9067610 298 8 0.9190321 306 8 0.949679 276 8 0.9102248 0.882881 0.8694249 0.9111980 0.867664 0.926036 0.8626026 0.9046093 0.8564704 0.9096307 0.9005754 0.894307 0.9526174 0.9115939 0.9247448 0.645925 0.7891067 0.8920250 0.917670 0.9011031 0.980300 0.83829426 0.902966 0.9461175 0.9036737 0.9380587 0.8410758 0.976509 0.9047249 0.9164647 0.9141808 0.921047 0.8908103 0.8501872 0.7515816 0.92713668 0.897965 0.9392373 0.9119471 0.9334495 0.8835564 0.9288198 0.934621 4 0.8943863 0.914928 -0.01998593 9 0.8925983 0.921126 -0.0285273 9.9762e-01 1.0836e-02 weaklyHypometh 1.000000 7.1658e-01 insignificant 0.99977001 3.4358e-04 weaklyHypometh 1.00000 0.114525 insignificant -0.05372878 0.018908 weaklyHypometh 1 insignificant 0.8943863 0.9038311 -0.00413523 9 0.8925983 0.896889 -0.0042911 3.1913e-01 1.9506e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 4.0387e-01 1.5120e-03 weaklyHypometh 1.0000e+00 2.0108e-01 insignificant 0.04381606 4.6090e-01 insignificant 1.0000e+00 insignificant 0.8943863 0.914021 -0.02224446 8 0.8925983 0.922811 -0.03021284 9.7853e-01 2.5018e-02 weaklyHypometh 1.0000e+00 8.6314e-01 insignificant 9.5019e-01 4.1782e-03 weaklyHypometh 1.0000e+00 0.32140212 insignificant -0.04530338 3.3735e-02 weaklyHypometh 0.9177124 insignificant 0.914928 0.9038311 1.2947e-02 9 0.921126 0.896889 0.0242362 1.7201e-01 1.5501e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.5281e-02 0.27210141 insignificant 9.5281e-01 1.00000 insignificant 0.0975448 1.2618e-01 insignificant 1.0000e+00 insignificant 0.914928 0.914021 -0.00528701 8 0.9211256 0.922811 -0.00168554 5.1476e-01 3.1357e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.3333e-01 5.6027e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.00842540 0.59195195 insignificant 1.00000 insignificant 0.9038311 0.914021 -0.0129044 8 0.896889 0.922811 -0.0259217 1.6484e-01 3.1801e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.3328e-01 4.6420e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0891194 1.5403e-01 insignificant 1.0000000 insignificant chr2 99583864 99584864 7641 ENSG00000222274 0.649407 433 11 0.4325637 560 12 0.6027735 428 12 0.6869445 364 11 0.5103127 320 12 0.651490 622 12 0.5152475 359 12 0.6008792 509 11 0.4493587 418 12 0.6498861 411 12 0.7674672 500 12 0.654280 289 12 0.2469335 326 12 0.5530366 325 12 0.514059 737 12 0.677970 335 11 0.2535714 36 2 0.3462617 411 11 0.470775 630 12 0.520323 423 12 0.6299308 172 12 0.34013265 270 12 0.768646 284 12 0.582226 242 11 0.741847 88 8 0.5548223 680 12 0.4972919 362 12 0.517837 161 10 0.5551442 446 12 0.4401091 723 12 0.4497063 574 12 0.678109 445 12 0.3454525 400 12 0.3790208 183 12 0.6103741 224 7 0.3428571 60 8 0.592404 302 11 0.2460470 482 12 0.5818488 452 11 0.4986317 384 11 0.5545738 378 11 0.4575931 304 12 0.464321 262 11 0.7013946 0.467372 0.6024295 0.7424529 0.574203 0.732186 0.5868450 0.6315860 0.5294946 0.7421814 0.8222129 0.771230 0.2646354 0.5983074 0.5267948 0.703821 0.2796419 0.3400722 0.493067 0.5592520 0.640846 0.39634175 0.798452 0.6138646 0.7578520 0.5695630 0.5747080 0.594617 0.5948485 0.4735881 0.4749021 0.716151 0.3221646 0.3611824 0.4951184 0.35419771 0.693792 0.2624011 0.6256311 0.5546837 0.5427530 0.4756689 0.480709 11 0.5870287 0.573645 0.01744143 12 0.5208617 0.503453 0.0174087 2.6092e-01 8.4276e-01 insignificant 1.000000 1.0000e+00 insignificant 0.81351023 5.4059e-01 insignificant 1.00000 1.000000 insignificant -0.02530655 0.605599 insignificant 1 insignificant 0.5870081 0.4197456 0.16692708 12 0.5194709 0.345655 0.1738155 9.1034e-09 9.9879e-01 weaklyHypermeth 2.5287e-07 1.0000e+00 weaklyHypermeth 8.5779e-04 9.9477e-01 weaklyHypermeth 1.8648e-02 1.0000e+00 weaklyHypermeth 0.11831772 1.2114e-01 insignificant 1.0000e+00 insignificant 0.5877672 0.573034 0.02445316 11 0.5590609 0.512163 0.04689745 2.3456e-02 9.4076e-01 weaklyHypermeth 8.5710e-01 1.0000e+00 insignificant 3.9409e-02 9.7470e-01 weaklyHypermeth 1.0000e+00 1.00000000 insignificant 0.02628334 5.2087e-01 insignificant 1.0000000 insignificant 0.573645 0.4202547 1.4719e-01 12 0.503453 0.370345 0.1331079 4.2992e-06 9.9865e-01 weaklyHypermeth 9.3461e-05 1.0000000 weaklyHypermeth 2.1420e-04 0.99625776 weaklyHypermeth 6.1199e-03 1.00000 weaklyHypermeth 0.1436243 7.3125e-02 insignificant 9.1406e-01 insignificant 0.573778 0.573034 0.01535119 11 0.5397429 0.512163 0.02757942 3.7945e-01 8.5153e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.3519e-01 9.9591e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.05158989 0.26017001 insignificant 1.00000 insignificant 0.4209246 0.573034 -0.1559237 11 0.411236 0.512163 -0.1009274 9.3333e-01 6.3229e-04 weaklyHypometh 1.0000e+00 1.0198e-02 weaklyHypometh 9.1245e-01 2.3739e-02 weaklyHypometh 1.0000e+00 3.2080e-01 insignificant -0.0920344 2.0368e-01 insignificant 1.0000000 insignificant chr2 99672964 99673964 7659 ENSG00000222274 0.805068 177 6 0.7821637 76 6 0.7922559 63 6 0.8457126 114 6 0.8591131 56 6 0.765747 190 6 0.7512901 99 6 0.8054233 58 6 0.8675214 56 4 0.7210317 40 6 0.8718752 110 6 0.821759 51 6 0.7524892 59 6 NA 0 0 0.730246 95 6 0.756999 67 6 0.8120915 92 6 0.8201754 118 6 0.856050 107 6 0.812936 183 6 0.9095238 25 3 0.85648148 53 6 0.775691 84 6 0.680556 28 3 0.952381 42 6 0.7487191 98 6 0.9111111 30 5 0.833333 28 3 0.7265512 52 5 0.8016966 132 6 0.8386752 118 6 0.791116 200 6 0.6484127 83 6 0.6667756 84 6 0.7415385 108 6 0.7452153 86 6 0.782077 28 3 0.7886003 83 5 0.8373876 180 6 0.8029287 187 6 0.8217097 155 6 0.8478131 178 6 0.863062 175 6 0.7996721 0.805690 0.7890916 0.8653104 0.878335 0.784777 0.7799404 0.8115079 0.8409244 0.7320645 0.8800517 0.837262 0.7588965 NA 0.7328454 0.754645 0.8195397 0.8326524 0.854594 0.8210169 0.891917 0.84904971 0.785998 0.6896930 0.9379699 0.7810246 0.8881579 0.846491 0.7481345 0.8079109 0.8430612 0.777984 0.6895363 0.6372635 0.7533806 0.69648703 0.734519 0.7964798 0.8285551 0.8009295 0.8373224 0.8450934 0.874095 3 0.8083932 0.810112 -0.00251830 6 0.8037079 0.809562 -0.0058546 5.6980e-01 3.6958e-01 insignificant 1.000000 1.0000e+00 insignificant 0.88265070 1.3580e-01 insignificant 1.00000 1.000000 insignificant -0.01724348 0.511702 insignificant 1 insignificant 0.8083932 0.7330508 0.07355672 6 0.8037079 0.746660 0.0570483 4.9389e-04 9.7559e-01 weaklyHypermeth 6.7118e-03 1.0000e+00 weaklyHypermeth 3.1909e-03 9.8687e-01 weaklyHypermeth 6.0206e-02 1.0000e+00 weaklyHypermeth 0.07280631 2.6853e-02 weaklyHypermeth 4.5514e-01 insignificant 0.8083932 0.840000 -0.03048114 6 0.8037079 0.834962 -0.03125397 9.6413e-01 7.6649e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7704e-01 6.6505e-02 insignificant 1.0000e+00 1.00000000 insignificant -0.03300401 4.4302e-02 weaklyHypometh 0.9644885 insignificant 0.810112 0.7330508 7.1999e-02 6 0.809562 0.746660 0.0629028 5.7931e-03 9.9420e-01 weaklyHypermeth 6.8965e-02 1.0000000 weaklyHypermeth 9.5253e-03 0.99930109 weaklyHypermeth 1.4432e-01 1.00000 insignificant 0.0900498 1.7927e-02 weaklyHypermeth 3.2595e-01 insignificant 0.810112 0.840000 -0.02561800 6 0.8095625 0.834962 -0.02539941 9.1704e-01 2.3086e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.3428e-01 7.2514e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.01576053 0.54745076 insignificant 1.00000 insignificant 0.7330508 0.840000 -0.1002759 6 0.746660 0.834962 -0.0883022 9.9903e-01 3.5957e-03 weaklyHypometh 1.0000e+00 4.7312e-02 weaklyHypometh 9.9868e-01 1.2409e-02 weaklyHypometh 1.0000e+00 1.8801e-01 insignificant -0.1058103 5.1791e-03 weaklyHypometh 0.1399745 insignificant chr2 101189364 101190364 7718 TBC1D8 ENSG00000204634 0.741630 255 6 0.7267861 186 6 0.6281774 102 6 0.7331947 174 6 0.7871795 75 5 0.708048 329 6 0.6421463 123 6 0.7747775 133 6 0.5981685 89 6 0.8460160 104 6 0.7717667 208 6 0.774322 50 4 0.7967762 130 6 0.8392857 45 4 0.826593 110 5 0.732071 36 3 0.7436594 182 5 0.7377134 194 6 0.648195 111 6 0.703883 243 6 0.7301587 45 6 0.80326087 77 4 0.723641 160 6 0.710802 60 6 0.810328 79 6 0.7562120 255 6 0.7764838 71 6 0.743056 40 3 0.7349440 91 6 0.7695117 290 6 0.6747447 185 6 0.723493 294 6 0.7000448 163 6 0.5850168 89 6 0.7364270 112 5 0.7238095 36 3 0.686241 103 6 0.6408105 210 6 0.7372947 170 6 0.8019849 170 6 0.7767051 188 6 0.7401907 148 6 0.828844 193 6 0.7535647 0.759136 0.6629499 0.7692544 0.797310 0.732351 0.7119992 0.8022850 0.6453445 0.8613429 0.7891581 0.775403 0.8031667 0.8628375 0.8309464 0.732316 0.8273428 0.7754179 0.664346 0.7306097 0.790476 0.81686335 0.737508 0.6941277 0.8348189 0.7633418 0.8027470 0.762302 0.7366347 0.7819884 0.6885572 0.740773 0.7327959 0.6165879 0.7608381 0.73771259 0.724084 0.7032139 0.7654979 0.8005719 0.8006862 0.7764236 0.846264 5 0.7867315 0.803886 -0.01243578 6 0.7397505 0.744873 -0.0051227 3.6308e-01 8.5241e-02 insignificant 1.000000 1.0000e+00 insignificant 0.70362325 2.3750e-01 insignificant 1.00000 1.000000 insignificant -0.00836669 0.664589 insignificant 1 insignificant 0.7867315 0.7363254 0.04985613 6 0.7397505 0.680885 0.0588654 1.0913e-02 9.6382e-01 weaklyHypermeth 1.1862e-01 1.0000e+00 insignificant 1.0679e-02 9.9529e-01 weaklyHypermeth 1.6046e-01 1.0000e+00 insignificant 0.05929456 5.9233e-02 insignificant 8.4938e-01 insignificant 0.7867315 0.848101 -0.04379718 6 0.7397505 0.784348 -0.04459779 9.9338e-01 7.5932e-03 weaklyHypometh 1.0000e+00 4.7930e-01 insignificant 9.8257e-01 3.7289e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant -0.03898435 1.2464e-01 insignificant 1.0000000 insignificant 0.803886 0.7363254 5.6764e-02 6 0.744873 0.680885 0.0639881 1.2089e-04 9.6423e-01 weaklyHypermeth 2.0149e-03 1.0000000 weaklyHypermeth 7.6881e-03 0.99679118 weaklyHypermeth 1.2013e-01 1.00000 insignificant 0.0676613 3.2201e-02 weaklyHypermeth 4.9423e-01 insignificant 0.803886 0.848101 -0.03726779 6 0.7448733 0.784348 -0.03947507 9.3091e-01 5.7799e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.2787e-01 1.1005e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.03061766 0.18464506 insignificant 1.00000 insignificant 0.7363254 0.848101 -0.0896576 6 0.680885 0.784348 -0.1034632 9.9990e-01 5.2314e-04 weaklyHypometh 1.0000e+00 8.5760e-03 weaklyHypometh 9.9974e-01 6.7952e-03 weaklyHypometh 1.0000e+00 1.0786e-01 insignificant -0.0982789 8.4878e-03 weaklyHypometh 0.1929053 insignificant chr2 102003364 102004364 7755 IL1R2 ENSG00000115590 0.416079 327 6 0.4000970 178 6 0.2869048 86 7 0.3599627 273 6 0.4659341 56 6 0.388794 241 6 0.3473551 126 6 0.5274621 67 6 0.3839286 47 6 0.4047619 25 3 0.4402202 159 6 0.371429 20 3 0.8484848 25 2 0.2339015 44 5 0.426074 49 5 0.341667 16 1 NA 0 0 0.4079552 294 6 0.329853 92 6 0.452381 173 6 0.2619048 25 2 0.00000000 3 0 0.476805 113 7 0.395833 60 6 0.310431 172 6 0.3774858 174 6 0.3928571 31 2 0.266667 17 2 0.3762987 107 6 0.3717312 160 6 0.3366629 217 6 0.368369 170 6 0.2663413 118 6 0.3746867 89 6 0.1704793 202 6 0.1063218 270 4 0.243837 155 6 0.3361291 166 6 0.3986778 372 7 0.4291095 322 7 0.3411454 229 6 0.3142240 175 6 0.535235 252 6 0.5055319 0.473129 0.3552350 0.4956427 0.636095 0.601154 0.4687401 0.5890637 0.5950092 0.7307692 0.5336136 0.631868 0.5612257 0.5035936 0.5392684 0.560897 NA 0.4881160 0.589415 0.5982906 0.442308 0.51651292 0.571644 0.6169872 0.4798245 0.5211976 0.5641026 0.494642 0.4516317 0.5674384 0.4780367 0.582456 0.4038594 0.5201305 0.3278448 0.17793988 0.502691 0.4485052 0.5916517 0.5149833 0.5355758 0.5402292 0.585685 0 0.3507398 0.294872 -0.00234332 6 0.3892922 0.399606 -0.0103138 7.0291e-01 3.2556e-01 insignificant 1.000000 1.0000e+00 insignificant 0.33022793 5.3019e-01 insignificant 1.00000 1.000000 insignificant 0.08435549 0.070676 lowCoverage 1 lowCoverage 0.3507853 0.1683367 0.08510964 6 0.3972864 0.318461 0.0788257 2.6225e-06 9.9396e-01 weaklyHypermeth 5.3189e-05 1.0000e+00 weaklyHypermeth 1.2726e-04 9.9904e-01 weaklyHypermeth 3.3988e-03 1.0000e+00 weaklyHypermeth 0.16264353 8.1886e-03 lowCoverage 2.0997e-01 lowCoverage 0.3507853 0.405486 -0.01556822 6 0.3972864 0.402526 -0.00523914 7.0391e-01 5.4188e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.4996e-01 5.6492e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.00859765 8.6198e-01 lowCoverage 1.0000000 lowCoverage 0.294306 0.1681682 8.1055e-02 6 0.337106 0.278653 0.0584529 1.5365e-04 9.7210e-01 weaklyHypermeth 2.5189e-03 1.0000000 weaklyHypermeth 9.8222e-04 0.96864967 weaklyHypermeth 2.0045e-02 1.00000 weaklyHypermeth 0.0782880 1.6868e-01 lowCoverage 1.0000e+00 lowCoverage 0.294306 0.405926 -0.00862009 6 0.3371061 0.477210 -0.14010376 7.5837e-01 6.5201e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.0682e-01 5.0384e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.07575784 0.17222461 lowCoverage 1.00000 lowCoverage 0.1681682 0.405926 -0.1025676 6 0.278653 0.477210 -0.1985567 9.9993e-01 1.2455e-02 weaklyHypometh 1.0000e+00 1.4482e-01 insignificant 9.9999e-01 5.7570e-03 weaklyHypometh 1.0000e+00 1.0100e-01 insignificant -0.1540459 2.3043e-02 weaklyHypometh 0.3840568 insignificant chr2 102050264 102051264 7765 IL1R2 ENSG00000115590 0.644139 79 6 0.6112172 78 6 0.6349206 30 4 0.8078283 68 6 0.5131780 52 3 0.695833 39 4 0.6119048 31 5 0.7962963 58 6 0.5631944 49 6 0.7523810 44 5 0.5922222 113 6 0.412037 25 1 0.8685185 57 6 0.6759740 49 5 0.611905 31 3 0.702381 22 2 0.6000000 35 1 0.7050265 58 5 0.661706 32 3 0.705769 53 5 0.8000000 8 0 0.90000000 10 0 0.756633 73 6 0.547619 25 3 0.816667 29 2 0.7179210 59 5 0.7500000 18 2 0.700000 17 1 0.6638889 70 6 0.6493506 80 5 0.5822329 68 5 0.811508 68 5 0.6043697 85 6 0.6816239 56 5 0.4246032 56 5 0.3333333 9 0 0.451020 29 3 0.6523810 80 6 0.6177249 65 6 0.6935185 100 5 0.7944862 118 6 0.8055556 26 3 0.573518 88 6 0.7376726 0.620328 0.6492674 0.8244172 0.638498 0.745513 0.6802198 0.8397436 0.7154915 0.7609890 0.6941453 0.415064 0.8668803 0.7141858 0.6627747 0.781593 NA 0.7941697 0.718178 0.7005671 0.799684 0.93429969 0.708448 0.5737179 0.7676330 0.8558888 0.8958382 0.711538 0.6362179 0.8220897 0.6429379 0.875458 0.6204772 0.6033037 0.5277778 0.47745875 0.525412 0.6811355 0.5971612 0.6752137 0.7526509 0.8301282 0.650540 0 0.7024048 0.731429 -0.01963870 6 0.6073259 0.661022 -0.0536966 9.1564e-01 2.1416e-01 insignificant 1.000000 1.0000e+00 insignificant 0.99504639 7.4399e-02 insignificant 1.00000 1.000000 insignificant -0.06633001 0.091822 lowCoverage 1 lowCoverage 0.7024048 0.6063492 0.10134503 6 0.6073259 0.519285 0.0880412 5.1529e-05 9.9979e-01 weaklyHypermeth 8.7337e-04 1.0000e+00 weaklyHypermeth 1.2793e-03 9.9998e-01 weaklyHypermeth 2.6651e-02 1.0000e+00 weaklyHypermeth 0.13376639 6.9771e-02 lowCoverage 9.5577e-01 lowCoverage 0.7024048 0.715365 0.00362564 6 0.6073259 0.674303 -0.06697726 5.8952e-01 3.0249e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.8655e-01 3.6829e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.03863896 4.8344e-01 lowCoverage 1.0000000 lowCoverage 0.731429 0.6063492 1.2513e-01 6 0.661022 0.519285 0.1417378 7.8354e-05 9.9940e-01 weaklyHypermeth 1.3746e-03 1.0000000 weaklyHypermeth 2.5548e-04 0.99999856 weaklyHypermeth 7.0966e-03 1.00000 weaklyHypermeth 0.2000964 1.5433e-02 lowCoverage 3.0669e-01 lowCoverage 0.731429 0.715365 0.02080343 6 0.6610225 0.674303 -0.01328069 4.3043e-01 8.0490e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.3642e-01 9.5043e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.02769105 0.62873434 lowCoverage 1.00000 lowCoverage 0.6063492 0.715365 -0.1001309 6 0.519285 0.674303 -0.1550184 9.9205e-01 8.7667e-04 weaklyHypometh 1.0000e+00 1.3283e-02 weaklyHypometh 9.9990e-01 3.7011e-03 weaklyHypometh 1.0000e+00 7.2560e-02 weaklyHypometh -0.1724053 4.4698e-02 lowCoverage 0.6122984 lowCoverage chr2 102078064 102079064 7770 IL1R1 ENSG00000115594 0.752509 161 7 0.4835165 131 7 0.5428571 39 3 0.7002826 120 6 0.6089482 61 6 0.562908 104 6 0.6610390 98 7 0.7284799 62 6 0.5904762 41 4 0.5888889 49 6 0.6851704 227 7 0.656667 34 4 0.6881489 72 4 0.5781250 30 4 0.775217 67 5 0.583333 9 0 0.4545455 11 1 0.7437662 134 3 0.750567 88 6 0.642326 117 6 0.7291667 28 3 1.00000000 8 0 0.759529 101 4 0.468750 21 1 0.652709 71 3 0.6888889 92 6 0.7051282 47 3 0.763889 16 1 0.4944850 132 7 0.6849206 78 6 0.7105084 89 6 0.636480 106 7 0.5433931 97 7 0.6527357 109 6 0.7812287 117 6 0.8571429 25 3 0.478158 95 4 0.5706981 82 6 0.4982520 153 4 0.6768062 129 7 0.6635345 148 7 0.6956159 154 4 0.728610 138 7 0.7793147 0.565611 0.5670588 0.7547311 0.729205 0.687331 0.6732213 0.7657919 0.6392157 0.6784314 0.7034787 0.856863 0.7671237 0.6852941 0.7431373 0.779927 NA 0.7163316 0.798319 0.7615780 0.668790 0.94798829 0.662240 0.6127451 0.7643732 0.6445752 0.7444741 0.651600 0.7246168 0.6535948 0.7960050 0.698564 0.6259825 0.6699203 0.7966719 0.98823529 0.523773 0.7173300 0.7042853 0.7265551 0.7082709 0.7387976 0.705717 1 0.6846574 0.694550 -0.00101835 6 0.6477652 0.577622 0.0701427 8.3321e-01 6.8306e-01 insignificant 1.000000 1.0000e+00 insignificant 0.77838739 5.8479e-01 insignificant 1.00000 1.000000 insignificant -0.05231602 0.250034 lowCoverage 1 lowCoverage 0.6842105 0.6666667 0.03465414 6 0.6329886 0.616226 0.0167625 3.0418e-02 9.5440e-01 weaklyHypermeth 3.0358e-01 1.0000e+00 insignificant 6.1868e-01 9.3054e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00833746 8.9918e-01 lowCoverage 1.0000e+00 lowCoverage 0.6853317 0.725762 -0.02591750 7 0.6542695 0.690122 -0.03585258 7.0732e-01 1.0384e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.1660e-01 4.5203e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.01367521 7.7098e-01 lowCoverage 1.0000000 lowCoverage 0.695431 0.6673040 4.0718e-02 6 0.649825 0.645283 0.0045426 1.0837e-02 9.4279e-01 weaklyHypermeth 1.2176e-01 1.0000000 insignificant 2.7351e-01 0.90700273 insignificant 1.0000e+00 1.00000 insignificant 0.0439786 5.5233e-01 lowCoverage 1.0000e+00 lowCoverage 0.695929 0.725762 -0.03306293 6 0.6712289 0.690122 -0.01889319 2.1563e-01 1.6952e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.2731e-01 6.9147e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.03864080 0.50312157 lowCoverage 1.00000 lowCoverage 0.6666667 0.725762 -0.0679942 6 0.594609 0.690122 -0.0955133 9.9242e-01 3.2002e-02 weaklyHypometh 1.0000e+00 3.4044e-01 insignificant 9.6152e-01 2.7526e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0053378 9.4264e-01 insignificant 1.0000000 insignificant chr2 102615664 102616664 7790 SLC9A2 ENSG00000115616 0.919426 167 5 0.7647817 293 5 0.8231484 161 5 0.9816467 115 3 0.8476422 101 5 0.912915 218 5 0.8510754 193 5 0.9007702 184 5 0.8418983 179 5 0.9354564 101 5 0.8597469 216 5 0.914904 79 3 0.9110656 141 5 1.0000000 43 2 0.874836 142 5 0.687579 92 5 0.7898284 66 3 0.8737815 159 4 0.875803 283 5 0.937489 179 5 0.9500000 32 3 0.79166667 17 2 0.896896 96 5 0.903333 55 3 0.966667 22 2 0.8796256 222 5 0.7295815 80 5 0.931569 81 5 0.9031650 167 5 0.9637321 229 5 0.9147780 180 5 0.840486 202 5 0.6715476 251 5 0.6454545 89 5 0.7884988 303 5 1.0000000 6 0 0.721507 186 5 0.7409568 256 5 0.9052381 205 5 0.9795265 162 5 0.9134921 152 3 0.9780702 126 4 0.896746 125 3 0.9494275 0.805094 0.8714595 0.9740699 0.944756 0.912167 0.8932620 0.9167744 0.9107310 0.9470312 0.8992777 0.942183 0.9292842 0.9871921 0.9245582 0.706860 0.8696080 0.9388245 0.904261 0.9465151 0.987069 0.81180859 0.923472 0.9284483 0.9501707 0.9396818 0.8173981 0.975406 0.9538477 0.9591103 0.9378328 0.892635 0.7531658 0.8140394 0.8492423 0.86294429 0.797634 0.8872681 0.9585796 0.9798543 0.9493021 0.9682396 0.849753 3 0.8727097 0.913232 -0.02312289 5 0.8616166 0.888066 -0.0264499 9.7882e-01 4.1842e-02 weaklyHypometh 1.000000 1.0000e+00 insignificant 0.86808793 2.8157e-01 insignificant 1.00000 1.000000 insignificant -0.01410200 0.595853 lowCoverage 1 lowCoverage 0.8727097 0.7552704 0.11767426 5 0.8616166 0.711267 0.1503496 3.0209e-08 9.3137e-01 weaklyHypermeth 7.9497e-07 1.0000e+00 weaklyHypermeth 1.2187e-04 9.4498e-01 weaklyHypermeth 3.3854e-03 1.0000e+00 weaklyHypermeth 0.11386217 8.1655e-02 lowCoverage 1.0000e+00 lowCoverage 0.8727097 0.948052 -0.04070804 4 0.8616166 0.930302 -0.06868519 9.8864e-01 2.4731e-03 lowCoverage 1.0000e+00 2.4731e-01 lowCoverage 9.8695e-01 2.6046e-02 lowCoverage 1.0000e+00 1.00000000 lowCoverage -0.05942499 3.2769e-02 lowCoverage 0.9177124 lowCoverage 0.913232 0.7552704 1.0633e-01 5 0.888066 0.711267 0.1767995 8.1059e-08 9.8528e-01 weaklyHypermeth 2.1331e-06 1.0000000 weaklyHypermeth 2.1381e-04 0.91833001 weaklyHypermeth 6.1199e-03 1.00000 weaklyHypermeth 0.1279642 5.8156e-02 lowCoverage 7.5527e-01 lowCoverage 0.913232 0.948052 -0.02125689 4 0.8880665 0.930302 -0.04223530 8.0917e-01 6.6142e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.0742e-01 5.2816e-02 lowCoverage 1.0000e+00 1.0000000 lowCoverage -0.04532299 0.12273843 lowCoverage 1.00000 lowCoverage 0.7552704 0.948052 -0.0784441 4 0.711267 0.930302 -0.2190348 9.9677e-01 4.0490e-05 lowCoverage 1.0000e+00 9.6405e-04 lowCoverage 9.7803e-01 3.2984e-03 lowCoverage 1.0000e+00 6.5968e-02 lowCoverage -0.1732872 1.9176e-02 lowCoverage 0.3551179 lowCoverage chr2 102648664 102649664 7796 ENSG00000208658 0.845525 254 8 0.7556508 170 8 0.7813963 150 8 0.7855117 178 8 0.7062037 112 8 0.752941 324 8 0.7665422 133 8 0.7764880 165 7 0.7469891 88 8 0.8921875 123 8 0.7219534 306 8 0.869824 97 8 0.6800325 130 7 0.8551282 52 5 0.657586 144 8 0.792113 61 7 0.6412605 97 7 0.8324466 221 8 0.643827 166 8 0.807538 240 8 0.7076118 56 5 0.85395421 101 8 0.780932 202 8 0.689429 80 6 0.857659 88 8 0.8415066 222 8 0.8230675 91 7 0.788095 48 5 0.8261273 154 7 0.8047175 238 8 0.8423449 259 8 0.670083 376 8 0.6685864 174 7 0.7209562 142 8 0.7258171 155 8 0.8141156 38 5 0.640194 139 7 0.7941588 240 8 0.7928754 227 8 0.8044015 287 8 0.8074157 217 8 0.8039502 169 7 0.821441 244 8 0.8500193 0.762127 0.7605803 0.7782773 0.824527 0.806611 0.7932537 0.7693584 0.7276944 0.9061241 0.8300305 0.874292 0.7869207 0.8194797 0.7523257 0.814225 0.8343119 0.8381476 0.732768 0.8228938 0.836364 0.84480106 0.791882 0.6704107 0.8580749 0.8216667 0.8573262 0.747775 0.8365965 0.8202630 0.8222861 0.762846 0.6794023 0.7109417 0.7456206 0.80257133 0.740126 0.7903016 0.7998944 0.8163629 0.8084567 0.8325636 0.835809 6 0.7972594 0.808355 -0.00326084 8 0.6162230 0.717744 -0.1015206 7.9112e-01 1.7221e-01 insignificant 1.000000 1.0000e+00 insignificant 0.74208300 2.4727e-01 insignificant 1.00000 1.000000 insignificant -0.02490335 0.333604 insignificant 1 insignificant 0.7977563 0.7454955 0.05342077 8 0.7531614 0.657849 0.0953129 4.5216e-05 9.6866e-01 weaklyHypermeth 7.7958e-04 1.0000e+00 weaklyHypermeth 7.2308e-03 8.9406e-01 weaklyHypermeth 1.2083e-01 1.0000e+00 insignificant 0.03825247 2.6709e-01 insignificant 1.0000e+00 insignificant 0.7992484 0.809441 -0.01183409 8 0.7848066 0.805255 -0.02044889 8.9651e-01 4.2983e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 8.8917e-01 7.2044e-02 insignificant 1.0000e+00 1.00000000 insignificant -0.04045957 2.8193e-02 weaklyHypometh 0.9177124 insignificant 0.809424 0.7454955 5.8319e-02 8 0.784650 0.657849 0.1268010 1.2550e-03 9.9511e-01 weaklyHypermeth 1.7191e-02 1.0000000 weaklyHypermeth 1.0054e-02 0.98662589 weaklyHypermeth 1.4572e-01 1.00000 insignificant 0.0631558 9.0584e-02 insignificant 1.0000e+00 insignificant 0.809874 0.809441 -0.01038395 8 0.7993974 0.805255 -0.00585809 7.6412e-01 1.9545e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.3961e-01 2.2534e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.01555621 0.44299543 insignificant 1.00000 insignificant 0.7463360 0.809441 -0.0652375 8 0.740080 0.805255 -0.0651759 9.4949e-01 2.4383e-03 weaklyHypometh 1.0000e+00 3.3865e-02 weaklyHypometh 9.4536e-01 1.8476e-02 weaklyHypometh 1.0000e+00 2.5310e-01 insignificant -0.0787120 3.5861e-02 weaklyHypometh 0.5433556 insignificant chr2 105363064 105364064 7814 C2orf49 ENSG00000135974 0.944444 30 3 0.7968563 295 5 0.7430556 60 5 0.8446154 106 5 0.7058081 39 3 0.712890 157 5 0.7083333 14 0 0.8351515 40 4 0.7500000 10 0 0.9888889 54 4 0.8993536 219 6 0.861818 35 3 0.7758333 45 4 0.8030303 31 3 0.849009 82 5 0.750000 21 2 1.0000000 1 0 0.8182908 116 5 0.891304 62 4 0.746900 131 5 0.8671296 32 4 0.93333333 40 3 0.940726 105 5 0.978865 63 4 0.833333 21 2 0.9182067 132 5 0.8358974 52 5 0.663105 33 3 0.8229412 43 3 0.9237537 57 3 0.9132937 95 5 0.872351 157 5 0.6575176 134 5 0.6790909 67 4 0.5674068 208 4 0.8000000 16 1 0.666667 24 1 0.8855813 105 5 0.5607843 44 3 0.7060380 235 4 0.8773148 88 5 0.5555556 7 0 0.893466 176 5 0.9500000 0.677454 0.6000000 0.8192308 0.591667 0.853680 0.6250000 0.8133333 0.7500000 1.0000000 0.8975703 0.813636 0.7250000 0.7636364 0.7977564 0.725000 0.8213422 0.8200000 0.858333 0.6560000 0.827500 0.90000000 0.893000 0.9666667 0.7250000 0.9171053 0.7900000 0.750000 0.7108824 0.9085044 0.8725000 0.824324 0.7923280 0.4786364 0.6987625 0.90201299 0.650000 0.8348162 0.5247059 0.7911765 0.8166667 0.6000000 0.847115 0 0.8552972 0.913253 -0.06344213 5 0.8313683 0.897832 -0.0664637 9.9990e-01 3.7959e-04 weaklyHypometh 1.000000 1.2653e-01 insignificant 0.99855876 4.1475e-03 weaklyHypometh 1.00000 0.592503 insignificant -0.05396558 0.095474 lowCoverage 1 lowCoverage 0.8552972 0.6552347 0.15313908 5 0.8313683 0.684701 0.1466678 1.6985e-04 9.9497e-01 weaklyHypermeth 2.5734e-03 1.0000e+00 weaklyHypermeth 4.1308e-01 7.8951e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.11190195 6.2930e-02 lowCoverage 8.8633e-01 lowCoverage 0.8552972 0.909091 -0.03698983 5 0.8313683 0.830812 0.00055652 8.2619e-01 1.8172e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.9178e-01 2.3188e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.10264745 2.3910e-01 lowCoverage 1.0000000 lowCoverage 0.913253 0.6552347 2.1621e-01 5 0.897832 0.684701 0.2131315 6.5404e-06 1.0000e+00 hypermethylated 1.3081e-04 1.0000000 hypermethylated 3.2675e-02 0.99936252 weaklyHypermeth 4.0339e-01 1.00000 insignificant 0.1658675 1.3696e-02 lowCoverage 2.9773e-01 lowCoverage 0.913253 0.909091 0.02989028 5 0.8978320 0.830812 0.06702027 2.7161e-02 9.2843e-01 weaklyHypermeth 8.2308e-01 1.0000e+00 insignificant 3.7603e-02 9.2148e-01 weaklyHypermeth 1.0000e+00 1.0000000 insignificant 0.15661303 0.09933101 lowCoverage 1.00000 lowCoverage 0.6552347 0.909091 -0.1950997 5 0.684701 0.830812 -0.1461112 8.5277e-01 5.8474e-02 insignificant 1.0000e+00 5.7895e-01 insignificant 7.6446e-01 6.8481e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0092545 9.1809e-01 lowCoverage 1.0000000 lowCoverage chr2 105363364 105364364 7815 C2orf49 ENSG00000135974 0.944444 30 3 0.7562276 293 5 0.6916667 59 5 0.8446154 106 5 0.6469697 38 3 0.855468 156 5 0.6111111 11 0 0.8351515 40 4 0.7500000 10 0 0.9888889 54 4 0.9192243 214 5 0.861818 35 3 0.7758333 45 4 0.8030303 31 3 0.849009 82 5 0.750000 21 2 1.0000000 1 0 0.8182908 116 5 0.891304 62 4 0.746900 131 5 0.8405556 31 4 0.93333333 40 3 0.928872 104 5 0.974638 60 4 0.833333 21 2 0.9018480 131 5 0.8358974 52 5 0.795726 32 3 0.8229412 43 3 0.8983382 56 3 0.8959524 93 5 0.872351 157 5 0.6890212 132 5 0.6790909 67 4 0.5674068 208 4 1.0000000 15 1 0.638889 20 1 0.8626975 104 5 0.5607843 44 3 0.8472456 234 4 0.8527778 87 5 0.5555556 7 0 0.872159 174 5 0.9500000 0.677454 0.6000000 0.8192308 0.591667 0.853680 0.6250000 0.8133333 0.7500000 1.0000000 0.8975703 0.813636 0.7250000 0.7636364 0.7977564 0.725000 0.8213422 0.8200000 0.858333 0.6560000 0.827500 0.90000000 0.893000 0.9666667 0.7250000 0.9171053 0.7900000 0.750000 0.7108824 0.9085044 0.8725000 0.824324 0.7923280 0.4786364 0.6987625 0.90201299 0.650000 0.8348162 0.5247059 0.7911765 0.8166667 0.6000000 0.847115 0 0.8553746 0.913415 -0.06353370 5 0.8284112 0.897398 -0.0689873 1.0000e+00 2.1303e-04 weaklyHypometh 1.000000 1.0652e-01 insignificant 0.99714243 3.3473e-03 weaklyHypometh 1.00000 0.557889 insignificant -0.06081788 0.037882 lowCoverage 1 lowCoverage 0.8553746 0.6556777 0.15248926 5 0.8284112 0.696641 0.1317706 1.9546e-04 9.8638e-01 weaklyHypermeth 2.9173e-03 1.0000e+00 weaklyHypermeth 6.0103e-01 6.5177e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.07748014 3.0616e-01 lowCoverage 1.0000e+00 lowCoverage 0.8553746 0.910256 -0.03817050 5 0.8284112 0.846974 -0.01856294 8.6079e-01 1.2118e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.8695e-01 1.6297e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.07929323 3.5203e-01 lowCoverage 1.0000000 lowCoverage 0.913415 0.6556777 2.1545e-01 5 0.897398 0.696641 0.2007578 8.7461e-06 9.9999e-01 hypermethylated 1.6819e-04 1.0000000 hypermethylated 7.6512e-02 0.99673143 insignificant 8.1396e-01 1.00000 insignificant 0.1382980 8.9566e-02 lowCoverage 1.0000e+00 lowCoverage 0.913415 0.910256 0.02841087 5 0.8973984 0.846974 0.05042432 2.3892e-02 8.8805e-01 weaklyHypermeth 7.4662e-01 1.0000e+00 insignificant 3.2624e-02 8.6080e-01 weaklyHypermeth 1.0000e+00 1.0000000 insignificant 0.14011110 0.12930047 lowCoverage 1.00000 lowCoverage 0.6556777 0.910256 -0.1959516 5 0.696641 0.846974 -0.1503335 7.9880e-01 4.8321e-02 weaklyHypometh 1.0000e+00 4.8809e-01 insignificant 6.5427e-01 7.1191e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0018131 9.8573e-01 lowCoverage 1.0000000 lowCoverage chr2 105824964 105825964 7846 NCK2 ENSG00000071051 0.775512 154 6 0.7203355 132 6 0.5194250 66 3 0.7764550 91 6 0.8037037 72 6 0.749074 309 6 0.8308567 105 6 0.7348773 91 6 0.6127214 63 5 0.8126118 116 6 0.8148148 94 6 0.684921 82 6 0.7665598 147 6 NA 0 0 0.886399 127 6 0.622222 31 5 0.6055556 38 3 0.7522242 122 6 0.773172 126 6 0.771429 284 6 0.6088287 63 6 0.78597710 90 6 0.814514 107 6 0.718467 69 6 0.757143 48 6 0.7565974 237 6 0.6957750 84 6 0.709127 53 6 0.7025946 112 6 0.7605673 194 6 0.6687329 155 6 0.698322 247 6 0.7388973 169 6 0.7405934 98 5 0.6919181 191 4 0.7222222 92 6 0.774786 74 6 0.6903568 221 6 0.8468612 164 6 0.7948718 76 6 0.8698802 113 6 0.9315476 51 6 0.808506 148 6 0.7930236 0.745443 0.5310609 0.8025188 0.798644 0.769677 0.8462954 0.7338641 0.6115534 0.8145911 0.8428304 0.675095 0.7858433 NA 0.8868148 0.665571 0.6402973 0.7575041 0.782607 0.7861161 0.651191 0.79981777 0.838203 0.7299102 0.7940979 0.7876885 0.7336792 0.713265 0.7244321 0.7949112 0.7076618 0.730865 0.7643508 0.7548069 0.7860331 0.75733568 0.784399 0.7305267 0.8648796 0.8237631 0.8758247 0.9475184 0.832923 6 0.7715556 0.736806 0.01614964 6 0.7532296 0.722179 0.0310503 8.6119e-04 2.2770e-02 weaklyHypermeth 0.430593 1.0000e+00 insignificant 0.08737575 1.0056e-01 insignificant 1.00000 1.000000 insignificant 0.01446564 0.588011 insignificant 1 insignificant 0.7715556 0.7053254 0.02300213 6 0.7532296 0.723782 0.0294473 3.0440e-02 4.5419e-01 weaklyHypermeth 3.0358e-01 1.0000e+00 insignificant 3.2538e-01 2.8389e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01105707 6.5949e-01 insignificant 1.0000e+00 insignificant 0.7715556 0.864130 -0.09505273 6 0.7532296 0.843212 -0.08998247 9.9947e-01 9.9421e-05 weaklyHypometh 1.0000e+00 4.9710e-02 weaklyHypometh 9.9971e-01 5.8305e-05 weaklyHypometh 1.0000e+00 0.02915231 weaklyHypometh -0.11281385 4.9553e-03 weaklyHypometh 0.2914899 insignificant 0.736806 0.7053254 1.8792e-04 6 0.722179 0.723782 -0.0016029 1.7913e-01 5.8918e-01 insignificant 1.0000e+00 1.0000000 insignificant 4.8841e-01 0.55442584 insignificant 1.0000e+00 1.00000 insignificant -0.0034086 8.7173e-01 insignificant 1.0000e+00 insignificant 0.736806 0.864130 -0.11148576 6 0.7221793 0.843212 -0.12103276 9.9873e-01 8.9459e-07 weaklyHypometh 1.0000e+00 4.4729e-04 weaklyHypometh 9.9992e-01 7.5554e-05 weaklyHypometh 1.0000e+00 0.0377769 weaklyHypometh -0.12727949 0.00259613 weaklyHypometh 0.51923 insignificant 0.7053254 0.864130 -0.1166355 6 0.723782 0.843212 -0.1194298 9.9899e-01 8.4535e-05 weaklyHypometh 1.0000e+00 1.7611e-03 weaklyHypometh 9.9769e-01 2.4878e-03 weaklyHypometh 1.0000e+00 5.6541e-02 weaklyHypometh -0.1238709 3.7715e-03 weaklyHypometh 0.1178595 insignificant chr2 107721664 107722664 7877 ST6GAL2 ENSG00000144057 0.749090 92 5 0.5929858 110 5 0.5722475 62 5 0.8057143 60 5 0.7453968 75 5 0.735146 119 5 0.6269103 149 5 0.6156311 131 5 0.6575641 47 5 0.6964286 36 3 0.6611936 145 5 0.766667 15 0 0.8370879 61 5 0.7123810 40 5 0.789031 79 5 0.720000 16 1 1.0000000 1 0 0.7889333 70 7 0.712111 93 5 0.547732 103 5 0.8433333 30 3 1.00000000 10 0 0.703395 51 5 0.630000 45 5 0.928744 51 4 0.6883895 124 5 0.8407407 75 4 0.649660 18 1 0.6959152 78 5 0.5245022 128 5 0.7827137 108 5 0.832564 96 5 0.6126197 109 5 0.4808081 94 5 0.7218045 90 5 1.0000000 14 2 0.592780 113 5 0.7133822 115 5 0.8141199 146 4 0.7931767 109 5 0.8008876 108 4 0.8166667 16 0 0.904762 100 4 0.7277200 0.581510 0.5602406 0.7753759 0.749722 0.667799 0.6326937 0.6363402 0.6327176 0.7543860 0.6379902 0.725877 0.8305560 0.6785714 0.6953712 0.750000 NA 0.8312579 0.710490 0.7909096 0.848684 1.00000000 0.682383 0.6228070 0.9094653 0.5957565 0.8008041 0.688283 0.7140046 0.7115402 0.6885073 0.770867 0.5868642 0.4776281 0.6846667 0.96093726 0.574805 0.7097032 0.7748524 0.7075928 0.7940238 0.8157895 0.839286 0 0.7034574 0.733662 -0.02454693 5 0.7148109 0.687025 0.0277857 9.1650e-01 1.6485e-01 insignificant 1.000000 1.0000e+00 insignificant 0.95820055 1.8708e-01 insignificant 1.00000 1.000000 insignificant -0.04338397 0.353454 lowCoverage 1 lowCoverage 0.7032601 0.6411215 0.06551370 5 0.6740696 0.635253 0.0388168 1.4859e-03 9.5013e-01 weaklyHypermeth 1.9050e-02 1.0000e+00 weaklyHypermeth 9.8596e-02 9.9103e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02971339 7.0909e-01 lowCoverage 1.0000e+00 lowCoverage 0.7032601 0.776618 -0.08935343 4 0.6740696 0.850619 -0.17654900 9.9968e-01 2.3642e-03 lowCoverage 1.0000e+00 2.4731e-01 lowCoverage 9.8361e-01 2.8705e-02 lowCoverage 1.0000e+00 1.00000000 lowCoverage -0.10931005 2.7466e-03 lowCoverage 0.1961827 lowCoverage 0.735149 0.6411215 9.0000e-02 5 0.737553 0.635253 0.1022998 3.7253e-04 9.8158e-01 weaklyHypermeth 5.4783e-03 1.0000000 weaklyHypermeth 2.8368e-02 0.99801896 weaklyHypermeth 3.6369e-01 1.00000 insignificant 0.0730974 3.9974e-01 lowCoverage 1.0000e+00 lowCoverage 0.735149 0.776618 -0.06266384 4 0.7375526 0.850619 -0.11306601 9.6848e-01 7.0552e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.0179e-01 2.3736e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage -0.06592607 0.15548399 lowCoverage 1.00000 lowCoverage 0.6411215 0.776618 -0.1589441 4 0.635253 0.850619 -0.2153658 1.0000e+00 1.0343e-02 lowCoverage 1.0000e+00 1.2461e-01 lowCoverage 9.9988e-01 3.8273e-02 lowCoverage 1.0000e+00 4.7064e-01 lowCoverage -0.1390234 1.1543e-01 lowCoverage 1.0000000 lowCoverage chr2 108514964 108515964 7888 GCC2 ENSG00000135968 0.902778 49 4 0.8554348 97 4 0.4375000 34 4 0.9545455 67 6 0.8601190 32 4 0.856592 164 6 0.7666667 22 4 0.8795177 76 6 0.8285714 34 6 0.8333333 40 6 0.9309368 85 6 0.666667 24 4 0.8803419 65 6 0.8263889 39 4 0.925926 44 4 0.000000 8 0 NA 0 0 0.9200000 19 3 0.744048 49 6 0.846087 148 6 0.9722222 27 3 0.87500000 41 5 0.763095 64 6 0.530556 19 1 0.966667 27 3 0.8508998 129 6 0.8293301 71 4 0.527778 17 1 0.9000000 24 4 0.8520202 85 6 0.8295170 89 4 0.835506 135 4 0.8058793 66 6 0.8750000 8 0 0.7069717 173 6 0.7500000 8 0 0.863248 48 4 0.9200000 103 4 0.6785714 28 4 0.9000000 26 4 0.8020833 35 4 0.9166667 31 3 0.752778 39 4 0.8586957 0.819589 0.6548913 0.9545455 0.793090 0.830118 0.6608696 0.8915432 0.8521739 0.7608696 0.8984228 0.670290 0.9080268 0.9701087 0.8937198 0.000000 NA 0.8956522 0.685300 0.7903267 0.956522 0.82065217 0.684058 0.5492754 0.9521739 0.7963721 0.7920219 0.380435 0.8565217 0.8079710 0.8320455 0.755958 0.8238066 0.8804348 0.8140097 0.75000000 0.854037 0.9017391 0.6801242 0.8768116 0.8055556 0.8804348 0.761353 0 0.8375912 0.815934 0.02367272 6 0.8490568 0.837392 0.0116651 3.5171e-01 6.8366e-01 insignificant 1.000000 1.0000e+00 insignificant 0.57014428 6.0632e-01 insignificant 1.00000 1.000000 insignificant -0.02602538 0.696162 lowCoverage 1 lowCoverage 0.8375912 0.7610837 0.03615070 6 0.8490568 0.775934 0.0731225 3.1017e-02 4.3210e-01 weaklyHypermeth 3.0358e-01 1.0000e+00 insignificant 8.5916e-01 2.8385e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03515933 5.7006e-01 lowCoverage 1.0000e+00 lowCoverage 0.8375912 0.811321 0.02117130 4 0.8490568 0.858048 -0.00899112 4.4810e-01 4.3481e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.4080e-01 1.9325e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage -0.02499603 7.1838e-01 lowCoverage 1.0000000 lowCoverage 0.815934 0.7610837 2.7108e-02 6 0.837392 0.775934 0.0614574 7.7829e-02 7.2118e-02 insignificant 7.0116e-01 1.0000000 insignificant 7.2463e-01 0.20135728 insignificant 1.0000e+00 1.00000 insignificant -0.0091340 8.6563e-01 lowCoverage 1.0000e+00 lowCoverage 0.815934 0.811321 -0.01116801 4 0.8373917 0.858048 -0.02065620 6.8058e-01 5.0039e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.4487e-01 1.3985e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 0.00102935 0.98685945 lowCoverage 1.00000 lowCoverage 0.7610837 0.811321 0.0204585 4 0.775934 0.858048 -0.0821136 3.6034e-01 6.6368e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 4.2968e-01 5.0740e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0101633 8.5979e-01 lowCoverage 1.0000000 lowCoverage chr2 108621764 108622764 7906 LIMS1 ENSG00000169756 0.860962 246 6 0.8495715 94 6 0.7775463 94 6 0.8167633 120 6 0.8646825 68 6 0.879606 276 6 0.9072732 133 6 0.8861416 110 6 0.8765406 101 6 0.8287037 101 6 0.8644905 154 6 0.919643 75 6 0.9021758 118 6 NA 0 0 0.849893 98 6 0.790226 85 6 0.8339275 74 6 0.8283460 122 6 0.874671 106 6 0.879417 257 6 0.9444444 52 6 0.89457071 67 6 0.866815 157 6 0.888426 74 6 0.986111 57 6 0.8567332 159 6 0.8260245 89 6 0.967593 46 4 0.9292929 85 6 0.8989344 181 6 0.8644630 179 6 0.880754 332 6 0.7776344 146 6 0.8743140 102 6 0.8700181 146 6 0.8164428 54 6 0.868661 63 6 0.7627510 138 6 0.8968679 225 6 0.9177988 204 6 0.8459022 144 6 0.8879781 273 6 0.960599 149 6 0.8704254 0.854618 0.7899832 0.8376491 0.887707 0.887386 0.9175489 0.8889097 0.8821598 0.8422769 0.8675587 0.929924 0.9194607 NA 0.8651418 0.802392 0.8407470 0.8501596 0.874232 0.8854782 0.955808 0.90253386 0.875602 0.9040404 0.9839015 0.8618181 0.8371723 0.962437 0.9235537 0.9111052 0.8736246 0.893196 0.7955931 0.8829847 0.8816905 0.82867133 0.888413 0.7926429 0.8985319 0.9258072 0.8672081 0.8898408 0.961360 6 0.8782895 0.893099 -0.01814089 6 0.8629224 0.883550 -0.0206279 7.2813e-01 2.3246e-02 weaklyHypometh 1.000000 1.0000e+00 insignificant 0.90534396 1.3772e-02 weaklyHypometh 1.00000 1.000000 insignificant -0.04294793 0.015997 weaklyHypometh 1 insignificant 0.8782895 0.8181818 0.04258372 6 0.8629224 0.814674 0.0482487 2.4282e-03 4.8904e-01 weaklyHypermeth 2.8907e-02 1.0000e+00 weaklyHypermeth 2.8023e-02 3.4813e-01 weaklyHypermeth 3.7363e-01 1.0000e+00 insignificant 0.02909537 2.3143e-01 insignificant 1.0000e+00 insignificant 0.8782895 0.932663 -0.04097974 6 0.8629224 0.908895 -0.04597282 9.9966e-01 1.5945e-02 weaklyHypometh 1.0000e+00 7.5929e-01 insignificant 9.9948e-01 3.6701e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant -0.04443027 7.6675e-02 insignificant 1.0000000 insignificant 0.893099 0.8181818 6.9893e-02 6 0.883550 0.814674 0.0688766 9.5036e-07 4.4644e-01 weaklyHypermeth 2.2101e-05 1.0000000 weaklyHypermeth 1.0565e-03 0.48863449 weaklyHypermeth 2.1129e-02 1.00000 weaklyHypermeth 0.0720433 1.5641e-02 weaklyHypermeth 3.0669e-01 insignificant 0.893099 0.932663 -0.02176348 6 0.8835503 0.908895 -0.02534494 8.8624e-01 3.3754e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 5.7356e-01 3.7486e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.00148234 0.95071566 insignificant 1.00000 insignificant 0.8181818 0.932663 -0.0854992 6 0.814674 0.908895 -0.0942215 8.8281e-01 1.5669e-04 weaklyHypometh 1.0000e+00 2.9017e-03 weaklyHypometh 6.9042e-01 1.1719e-02 weaklyHypometh 1.0000e+00 1.8310e-01 insignificant -0.0735256 2.6435e-02 weaklyHypometh 0.4263721 insignificant chr2 108706164 108707164 7913 RANBP2 ENSG00000153201 0.775682 256 9 0.6693165 172 8 0.6200877 128 9 0.7491440 158 8 0.7395282 102 8 0.727403 376 9 0.6993001 131 9 0.8124650 113 7 0.7372575 124 9 0.7379351 87 8 0.7232658 284 9 0.668029 119 9 0.7742424 93 8 0.6527778 22 2 0.756284 178 9 0.790137 71 7 0.6914158 103 8 0.7056585 192 9 0.784924 169 8 0.748521 345 9 0.7671958 47 5 0.72053571 96 8 0.738028 184 9 0.683566 87 6 0.812004 44 5 0.7072255 164 9 0.5798997 101 9 0.799074 71 6 0.7639476 135 6 0.7358909 188 9 0.6975054 160 8 0.726325 446 9 0.6595621 172 9 0.6523654 133 9 0.6775917 160 9 0.7604167 41 4 0.759175 110 7 0.5786877 205 9 0.8040479 260 9 0.7879839 231 9 0.7198106 221 9 0.8631388 202 8 0.757942 292 9 0.8139282 0.670811 0.7572168 0.8140902 0.822969 0.817078 0.7767996 0.8176573 0.8098727 0.7638141 0.7419264 0.693297 0.8022866 0.7884345 0.8056186 0.871377 0.8035778 0.7266398 0.765614 0.8085777 0.854178 0.86263736 0.776597 0.7528736 0.7718528 0.7706676 0.6911973 0.871673 0.7805323 0.7989345 0.7443060 0.790392 0.7266433 0.6389469 0.7246331 0.75285231 0.787908 0.6858726 0.8529574 0.8258239 0.7738001 0.8704906 0.817415 5 0.7738132 0.773070 -0.00210069 9 0.7184673 0.692937 0.0255299 3.2789e-01 4.9432e-01 insignificant 1.000000 1.0000e+00 insignificant 0.60164559 4.5060e-01 insignificant 1.00000 1.000000 insignificant 0.00056899 0.978424 insignificant 1 insignificant 0.7737725 0.7028015 0.06973078 9 0.7103140 0.606275 0.1040395 5.6792e-05 9.9910e-01 weaklyHypermeth 9.4654e-04 1.0000e+00 weaklyHypermeth 3.5851e-03 9.9852e-01 weaklyHypermeth 6.4839e-02 1.0000e+00 weaklyHypermeth 0.04686900 1.7079e-01 insignificant 1.0000e+00 insignificant 0.7737725 0.822554 -0.04657956 9 0.7103140 0.798044 -0.08773027 9.7737e-01 7.1868e-03 weaklyHypometh 1.0000e+00 4.7930e-01 insignificant 9.9250e-01 2.9628e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant -0.05841582 6.9871e-02 insignificant 1.0000000 insignificant 0.773256 0.7028015 6.9202e-02 9 0.695564 0.606275 0.0892899 3.3027e-04 9.9988e-01 weaklyHypermeth 4.9294e-03 1.0000000 weaklyHypermeth 9.6804e-03 0.99880493 weaklyHypermeth 1.4448e-01 1.00000 insignificant 0.0463000 1.9866e-01 insignificant 1.0000e+00 insignificant 0.773256 0.822554 -0.05005136 9 0.6955644 0.798044 -0.10247984 9.9464e-01 1.4574e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.8489e-01 4.7521e-03 weaklyHypometh 1.0000e+00 1.0000000 insignificant -0.05898481 0.07952347 insignificant 1.00000 insignificant 0.7028015 0.822554 -0.1205911 9 0.606275 0.798044 -0.1917698 9.9998e-01 1.3047e-05 weaklyHypometh 1.0000e+00 3.5263e-04 weaklyHypometh 9.9997e-01 2.1802e-03 weaklyHypometh 1.0000e+00 5.1910e-02 weaklyHypometh -0.1052848 1.9596e-02 weaklyHypometh 0.3562839 insignificant chr2 109013964 109014964 7916 EDAR ENSG00000135960 0.004861 922 21 0.0079155 611 21 0.0018674 656 21 0.0517059 661 17 0.0120030 440 21 0.013415 1080 21 0.0111642 803 21 0.0118949 538 21 0.0069658 835 21 0.0027561 835 21 0.0091158 791 21 0.012734 869 21 0.0051304 816 21 0.0000000 178 8 0.008704 967 21 0.013369 768 21 0.0155685 603 21 0.0087912 800 21 0.010227 425 21 0.012721 977 21 0.0416667 205 19 0.00089847 599 13 0.087365 946 21 0.011406 339 21 0.005291 367 12 0.0055560 952 21 0.0016426 661 21 0.016272 373 20 0.0088216 548 21 0.0021361 957 21 0.0022932 920 21 0.056050 1197 21 0.0081027 526 21 0.0276808 570 21 0.0606083 671 16 0.0099206 352 20 0.013713 280 20 0.0108653 662 21 0.0103550 1219 21 0.0142049 1094 21 0.0069460 697 17 0.0165370 847 21 0.012861 863 21 0.0091834 0.010606 0.0047190 0.0202448 0.012208 0.015521 0.0074239 0.0184241 0.0048322 0.0043640 0.0116520 0.015888 0.0077803 0.0057935 0.0085848 0.020417 0.0189406 0.0112167 0.014395 0.0109478 0.000000 0.00119272 0.052619 0.0082512 0.0064314 0.0065577 0.0028583 0.017273 0.0072448 0.0027674 0.0034457 0.012799 0.0053813 0.0298198 0.0613583 0.00676991 0.018282 0.0128924 0.0110881 0.0173565 0.0089281 0.0152587 0.013483 15 0.0103652 0.010417 0.00055998 21 0.0087106 0.040341 -0.0316306 7.2813e-01 4.8406e-01 insignificant 1.000000 1.0000e+00 insignificant 0.40036788 9.1567e-01 insignificant 1.00000 1.000000 insignificant -0.00890436 0.300607 insignificant 1 insignificant 0.0103702 0.0460634 -0.03017675 21 0.0095024 0.030468 -0.0209652 9.8706e-01 4.2692e-07 weaklyHypometh 1.0000e+00 2.1346e-04 weaklyHypometh 8.1705e-01 3.2907e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01076965 2.5841e-01 insignificant 1.0000e+00 insignificant 0.0103673 0.014195 -0.00161345 21 0.0095024 0.011337 -0.00183487 8.4961e-01 9.2341e-04 weaklyHypometh 1.0000e+00 1.1543e-01 insignificant 9.0645e-01 2.9745e-03 weaklyHypometh 1.0000e+00 0.32140212 insignificant -0.00113534 6.9588e-01 insignificant 1.0000000 insignificant 0.010308 0.0460634 -3.3573e-02 21 0.021281 0.030468 -0.0091864 9.0119e-01 1.9723e-03 weaklyHypometh 1.0000e+00 0.2560685 insignificant 9.2605e-01 0.36891457 insignificant 1.0000e+00 1.00000 insignificant -0.0018653 8.7309e-01 insignificant 1.0000e+00 insignificant 0.010057 0.014195 -0.00256442 21 0.0099176 0.011337 -0.00141971 7.5946e-01 1.2519e-03 weaklyHypometh 1.0000e+00 3.4838e-01 insignificant 9.9251e-01 2.0138e-03 weaklyHypometh 1.0000e+00 0.6712614 insignificant 0.00776902 0.35593521 insignificant 1.00000 insignificant 0.0460784 0.014201 0.0338836 21 0.031918 0.011877 0.0200413 1.2416e-01 2.0731e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.9362e-01 2.6232e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0096343 3.0167e-01 insignificant 1.0000000 insignificant chr2 111839990 111840990 7981 BCL2L11 ENSG00000153094 0.193871 762 27 0.2686773 1349 29 0.3224918 945 29 0.2424631 366 14 0.3740777 619 29 0.406753 839 29 0.3548005 1058 29 0.3588750 806 29 0.2600708 823 29 0.2528184 740 28 0.3038734 1332 29 0.235837 918 28 0.7878456 700 23 0.4484114 156 8 0.488070 689 28 0.192988 972 28 0.2121548 666 25 0.2651580 476 18 0.819479 967 28 0.699930 710 28 0.3440820 381 26 0.05426562 288 17 0.261758 720 29 0.353234 557 29 0.338111 135 11 0.6309958 981 29 0.4168265 541 28 0.660235 270 15 0.3236745 754 28 0.8711214 904 26 0.6787340 874 28 0.391484 1055 29 0.2832688 794 28 0.2908848 819 28 0.3789747 878 25 0.3375339 165 9 0.269998 504 23 0.2824591 1026 29 0.1491571 1060 29 0.1051192 1081 29 0.1603535 412 26 0.0975421 482 23 0.097260 617 21 0.2908589 0.357341 0.3645956 0.3027814 0.414637 0.426840 0.3599625 0.4444628 0.3132595 0.2747416 0.3300838 0.260141 0.7503700 0.3776530 0.5495153 0.242717 0.2095146 0.2795787 0.869690 0.6673440 0.383034 0.09063380 0.287155 0.3767390 0.4370849 0.7184172 0.4500367 0.624822 0.3256899 0.8785068 0.6859111 0.425695 0.2912916 0.2730574 0.3699565 0.39201227 0.269685 0.2775927 0.1413662 0.1409761 0.1885050 0.1341622 0.116504 13 0.3798528 0.497786 -0.10130688 29 0.3808537 0.457742 -0.0768878 1.0000e+00 3.0134e-08 weaklyHypometh 1.000000 3.0134e-05 weaklyHypometh 0.99999900 9.8835e-05 weaklyHypometh 1.00000 0.049417 weaklyHypometh -0.06927785 0.380632 insignificant 1 insignificant 0.3798942 0.2900143 0.09879548 29 0.3827237 0.280905 0.1018182 3.6385e-07 7.7226e-01 weaklyHypermeth 8.0856e-06 1.0000e+00 weaklyHypermeth 1.6663e-05 6.0687e-01 weaklyHypermeth 5.6274e-04 1.0000e+00 weaklyHypermeth 0.06724572 1.5483e-01 insignificant 1.0000e+00 insignificant 0.3797293 0.137733 0.26371614 28 0.3584812 0.113531 0.24495054 5.4332e-27 1.0000e+00 hypermethylated 2.7166e-24 1.0000e+00 hypermethylated 1.4006e-31 1.0000e+00 hypermethylated 1.4006e-28 1.00000000 hypermethylated 0.25254602 1.0436e-05 hypermethylated 0.0028516 hypermethylated 0.497716 0.2900143 2.1058e-01 29 0.452150 0.280905 0.1712447 8.2735e-14 1.0000e+00 hypermethylated 4.1367e-12 1.0000000 hypermethylated 1.0935e-06 0.99965711 hypermethylated 8.2563e-05 1.00000 hypermethylated 0.1365236 6.3054e-02 insignificant 7.9816e-01 insignificant 0.498185 0.137733 0.36021361 28 0.4524257 0.113531 0.33889495 3.4783e-36 1.0000e+00 hypermethylated 3.4783e-33 1.0000e+00 hypermethylated 6.7674e-27 1.0000e+00 hypermethylated 6.7674e-24 1.0000000 hypermethylated 0.32182387 0.00039072 hypermethylated 0.13024 insignificant 0.2901530 0.137959 0.1455051 28 0.299028 0.120855 0.1781731 6.4256e-19 1.0000e+00 weaklyHypermeth 3.2128e-16 1.0000e+00 weaklyHypermeth 4.4380e-10 1.0000e+00 weaklyHypermeth 2.2190e-07 1.0000e+00 weaklyHypermeth 0.1853003 1.5780e-05 weaklyHypermeth 0.0039450 weaklyHypermeth chr2 111954590 111955590 8010 BCL2L11 ENSG00000153094 0.681287 116 6 0.7450780 174 6 0.7405372 109 6 0.8210784 94 6 0.6418219 58 6 0.832385 254 6 0.5067901 77 6 0.7519189 128 6 0.6180124 93 6 0.6388889 51 1 0.6251213 162 6 0.6041667 29 1 0.6934524 91 6 0.7545455 85 6 0.6459513 115 6 0.1666667 18 1 0.000000 2 0 0.4776423 121 6 0.5244530 109 6 0.608570 154 6 0.617857 42 5 0.7490741 49 3 0.8087302 110 6 0.5797101 67 6 0.5865385 46 1 0.7123457 204 6 0.6768297 148 6 0.8432540 36 2 0.803379 97 6 0.6954609 191 6 0.732008 112 6 0.523855 182 6 0.7379710 131 6 0.7500000 42 3 0.75225 112 1 0.8888889 8 0 0.8053451 62 6 0.8371790 156 6 0.8365385 79 6 0.9047619 56 6 0.7369369 62 6 0.6883963 56 5 0.6795444 104 6 0.6723000 0.648670 0.6219545 0.7321910 0.594735 0.7105320 0.6505946 0.6931132 0.5855604 0.5535168 0.7121263 0.6169725 0.6294233 0.7824854 0.6418901 0.6788991 NA 0.4089282 0.4678899 0.581237 0.721035 0.5618247 0.794583 0.5173514 0.698836 0.7297995 0.6631320 0.7200743 0.725954 0.5815875 0.7663504 0.546672 0.5794017 0.5963303 0.63550610 0.5474006 0.549358 0.4681646 0.795166 0.8754915 0.666055 0.5619951 0.6268084 1 0.6642157 0.6752336 -0.01062602 6 0.682071 0.679134 0.00293656 3.6905e-01 0.29776770 insignificant 1.00000000 1.00000 insignificant 7.2387e-01 0.01155245 weaklyHypometh 1.000000 1.00000 insignificant -0.09016850 0.106112 lowCoverage 1 lowCoverage 0.664216 0.6888454 -0.0384304 6 0.682071 0.8014891 -0.1194182 5.5615e-01 6.0236e-05 weaklyHypometh 1.0000e+00 1.5059e-02 weaklyHypometh 4.6180e-01 1.3502e-05 weaklyHypometh 1.0000e+00 0.0069068 weaklyHypometh -0.1913544 1.1137e-03 lowCoverage 6.9609e-02 lowCoverage 0.6642157 0.725490 -0.0731559 6 0.6820709 0.7599996 -0.07792865 9.9594e-01 3.0918e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9913e-01 1.4414e-02 weaklyHypometh 1.0000e+00 9.6093e-01 insignificant -0.1653172 0.02056855 lowCoverage 0.882365 lowCoverage 0.6752336 0.6888454 -0.015214 6 0.679134 0.8014891 -0.1223548 2.1764e-01 5.1269e-05 weaklyHypometh 1.0000e+00 1.2817e-02 weaklyHypometh 3.9682e-01 1.7867e-04 weaklyHypometh 1.0000e+00 8.9336e-02 weaklyHypometh -0.1011859 1.7413e-02 lowCoverage 5.4416e-01 lowCoverage 0.6752336 0.725490 -0.0543095 6 0.679134 0.7599996 -0.0808652 9.8452e-01 2.7599e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.3678e-01 9.4352e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.07514874 0.1926206 lowCoverage 1.00000 lowCoverage 0.6888454 0.725490 -0.04297843 6 0.8014891 0.7599996 0.0414896 0.0095670 3.5694e-01 inconclusive 1.00000 1.0000e+00 insignificant 0.0247801 4.4651e-01 inconclusive 1 1.0000e+00 insignificant 0.0260371 6.2150e-01 lowCoverage 1.0000e+00 lowCoverage chr2 111958390 111959390 8012 BCL2L11 ENSG00000153094 0.861675 239 7 0.6752990 107 7 0.6568340 120 7 0.9272524 96 6 0.8903061 58 6 0.875363 178 7 0.6907197 64 4 0.7714286 46 4 0.7699653 72 7 0.9047619 43 4 0.8041667 151 7 0.8313234 44 3 0.7764072 59 4 NA 0 0 0.9507318 64 7 0.7291667 40 5 0.796245 47 4 0.9258581 119 7 0.7808780 76 6 0.844214 195 8 0.923469 49 4 0.7971014 59 4 0.8370669 162 8 0.9630370 45 5 0.7761905 25 3 0.8412183 103 6 0.7395833 37 5 0.7023810 40 4 0.875000 36 4 0.9033570 103 7 0.882812 85 4 0.879394 204 7 0.7504516 98 6 0.8518737 86 6 0.82575 176 7 0.8357143 36 5 0.8133929 49 6 0.8735977 121 7 0.8994518 229 7 0.8959789 178 7 0.8682266 166 7 0.8672572 195 7 0.8654124 190 7 0.8389551 0.757159 0.6779603 0.9113827 0.827881 0.8503628 0.8663102 0.8238095 0.8829949 0.8323157 0.8221783 0.8014569 0.8562767 NA 0.9476518 0.7807123 0.713828 0.9071400 0.8086735 0.879945 0.876050 0.7666840 0.858274 0.9232532 0.806843 0.8708665 0.7485994 0.8249300 0.801471 0.8452613 0.8476891 0.815200 0.6747163 0.7468546 0.78103650 0.7648837 0.818487 0.7953496 0.869821 0.8613242 0.800010 0.8255208 0.8371723 2 0.8421342 0.8491561 -0.00497651 6 0.838576 0.858084 -0.01950830 8.1034e-01 0.39739349 insignificant 1.00000000 1.00000 insignificant 8.1866e-01 0.14678277 insignificant 1.000000 1.00000 insignificant -0.02956339 0.333837 insignificant 1 insignificant 0.842134 0.7650177 0.0666926 7 0.838576 0.8058757 0.0327000 5.6656e-05 5.4640e-01 weaklyHypermeth 1.4164e-03 1.0000e+00 weaklyHypermeth 1.2118e-02 2.0168e-01 weaklyHypermeth 2.8189e-01 1.0000000 insignificant -0.0113092 6.7421e-01 insignificant 1.0000e+00 insignificant 0.8421342 0.898747 -0.0292778 6 0.8385757 0.8909102 -0.05233446 8.1188e-01 3.9885e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 7.6727e-01 5.8103e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0654445 0.00603407 weaklyHypometh 0.519976 insignificant 0.8491561 0.7650177 0.073592 6 0.858084 0.8058757 0.0522083 1.1914e-04 4.1126e-01 weaklyHypermeth 2.9165e-03 1.0000e+00 weaklyHypermeth 2.2776e-02 9.2917e-01 weaklyHypermeth 4.2177e-01 1.0000e+00 insignificant 0.0182542 5.2616e-01 insignificant 1.0000e+00 insignificant 0.8491561 0.898747 -0.0169912 6 0.858084 0.8909102 -0.0328262 9.7300e-01 7.6798e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 8.2782e-01 6.8032e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03588111 0.1509001 insignificant 1.00000 insignificant 0.7650177 0.898747 -0.07628039 6 0.8058757 0.8909102 -0.0850345 0.9562001 5.9724e-04 weaklyHypometh 1.00000 1.8098e-02 weaklyHypometh 0.9117158 1.7653e-02 weaklyHypometh 1 4.2031e-01 insignificant -0.0541353 2.4450e-02 weaklyHypometh 6.0660e-01 insignificant chr2 113073690 113074690 8061 CHCHD5 ENSG00000125611 0.778670 178 5 0.6065035 68 5 0.7109091 57 5 0.7962367 93 5 0.7142857 37 5 0.746941 131 5 0.7235043 79 5 0.5935714 47 5 0.6699808 89 5 0.7295455 66 5 0.7289111 162 5 0.5434732 60 5 0.6556502 92 5 NA 0 0 0.7798663 88 5 0.6284848 34 5 0.695915 52 5 0.8286765 79 5 0.7252786 72 5 0.808878 136 5 0.829524 31 5 0.6858586 52 5 0.8157796 85 5 0.6818182 25 1 0.8607143 35 4 0.7723810 89 5 0.5245238 53 5 0.7066667 23 2 0.730476 59 5 0.6985714 71 5 0.752033 70 5 0.741383 187 5 0.6702791 50 3 0.6401471 78 5 0.81550 85 5 0.7939286 51 5 0.7699134 40 5 0.7361077 103 5 0.8149457 187 5 0.8232051 183 5 0.8113300 130 5 0.7821564 173 5 0.7774725 177 5 0.7999368 0.630178 0.7215618 0.8082138 0.749771 0.7719751 0.7519587 0.6422085 0.7052174 0.7473631 0.7580670 0.5828477 0.6937676 NA 0.7950833 0.6653069 0.724684 0.8312359 0.7575306 0.817671 0.849847 0.7124450 0.828422 0.7069736 0.880838 0.8007021 0.5641560 0.7448718 0.764662 0.7432463 0.7733740 0.760620 0.6951444 0.6620051 0.81999246 0.8094437 0.793588 0.7483702 0.834007 0.8417776 0.830823 0.8066928 0.7992140 4 0.7475309 0.7794872 -0.01179692 5 0.729002 0.740957 -0.01195571 7.8417e-01 0.27892039 insignificant 1.00000000 1.00000 insignificant 9.3642e-01 0.05319197 insignificant 1.000000 1.00000 insignificant -0.02461178 0.434262 lowCoverage 1 lowCoverage 0.747531 0.7567568 0.0094008 5 0.729002 0.7357566 -0.0067550 2.7739e-02 4.0327e-01 weaklyHypermeth 3.7998e-01 1.0000e+00 insignificant 2.8594e-01 2.0716e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0289466 4.0959e-01 lowCoverage 1.0000e+00 lowCoverage 0.7475309 0.791765 -0.0705203 5 0.7290016 0.8011168 -0.07211520 9.9944e-01 9.4667e-04 weaklyHypometh 1.0000e+00 1.8933e-01 insignificant 9.9999e-01 6.7201e-05 weaklyHypometh 1.0000e+00 3.3600e-02 weaklyHypometh -0.0931230 0.00011875 lowCoverage 0.088572 lowCoverage 0.7794872 0.7567568 0.023312 5 0.740957 0.7357566 0.0052007 9.3330e-03 7.0126e-01 weaklyHypermeth 1.3930e-01 1.0000e+00 insignificant 5.4947e-02 7.7369e-01 insignificant 8.5855e-01 1.0000e+00 insignificant -0.0043349 9.1123e-01 lowCoverage 1.0000e+00 lowCoverage 0.7794872 0.791765 -0.0563236 5 0.740957 0.8011168 -0.0601595 9.9443e-01 2.4896e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.6856e-01 1.1426e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.06851117 0.0240340 lowCoverage 1.00000 lowCoverage 0.7567568 0.791765 -0.08056792 5 0.7357566 0.8011168 -0.0653602 0.9939983 1.5123e-04 weaklyHypometh 1.00000 5.6012e-03 weaklyHypometh 0.9901996 2.6627e-02 weaklyHypometh 1 5.3254e-01 insignificant -0.0641763 7.5518e-02 lowCoverage 1.0000e+00 lowCoverage chr2 113201290 113202290 8080 NT5DC4 ENSG00000144130 0.621429 100 5 NA 0 0 NA 0 0 0.9384615 69 5 NA 0 0 0.797619 55 5 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 0.9349747 70 5 0.9600000 47 5 0.833333 15 0 NA 0 0 NA 0 0 1.0000000 10 0 NA 0 0 NA 0 0 0.9166667 38 5 NA 0 0 NA 0 0 NA 0 0 1.0000000 18 0 0.933333 25 4 0.930303 35 5 NA 0 0 NA 0 0 1.00000 20 1 0.8366667 144 5 NA 0 0 0.8690476 68 5 0.9698413 102 5 1.0000000 44 5 0.9447619 67 5 0.9150376 75 5 0.9249554 64 5 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0.9193084 0.9365079 -0.01738155 0 0.918376 0.934266 -0.01588979 6.9069e-01 0.04853616 noCoverage 1.00000000 1.00000 noCoverage 9.0922e-01 0.12576217 noCoverage 1.000000 1.00000 noCoverage -0.10842440 0.097104 lowCoverage 1 lowCoverage 0.919308 0.8577586 0.0718730 0 0.918376 0.8529221 0.0654539 3.4782e-02 3.5437e-01 noCoverage 4.6376e-01 1.0000e+00 noCoverage 1.9104e-01 6.8634e-01 noCoverage 1.0000e+00 1.0000000 noCoverage -0.0542686 4.8200e-01 lowCoverage 1.0000e+00 lowCoverage 0.9193084 0.948864 -0.0339597 0 0.9183759 0.9501143 -0.03173837 8.8119e-01 6.3587e-03 noCoverage 1.0000e+00 6.0502e-01 noCoverage 8.0064e-01 8.9859e-02 noCoverage 1.0000e+00 1.0000e+00 noCoverage -0.1032830 0.10880162 lowCoverage 1.000000 lowCoverage 0.9365079 0.8577586 0.086554 0 0.934266 0.8529221 0.0813437 3.5696e-02 6.4490e-01 noCoverage 4.6969e-01 1.0000e+00 noCoverage 1.3860e-01 9.7037e-01 noCoverage 1.0000e+00 1.0000e+00 noCoverage 0.0541558 3.9509e-01 lowCoverage 1.0000e+00 lowCoverage 0.9365079 0.948864 -0.0152375 0 0.934266 0.9501143 -0.0158486 9.3583e-01 4.2583e-01 noCoverage 1.0000e+00 1.0000e+00 noCoverage 5.9643e-01 9.3036e-01 noCoverage 1.0000e+00 1.0000e+00 noCoverage 0.00514136 0.8347337 lowCoverage 1.00000 lowCoverage 0.8577586 0.948864 -0.08969809 5 0.8529221 0.9501143 -0.0971922 0.6518636 1.0862e-02 weaklyHypometh 1.00000 1.8410e-01 insignificant 0.7109826 1.1412e-01 insignificant 1 1.0000e+00 insignificant -0.0490145 4.3312e-01 lowCoverage 1.0000e+00 lowCoverage chr2 113378190 113379190 8094 BIRC8 ENSG00000163098 0.690800 244 7 0.6580657 158 7 0.5099229 109 7 0.6788206 146 7 0.6642157 64 7 0.572137 319 7 0.6406130 98 7 0.6927422 130 7 0.6022059 94 5 0.6972294 100 7 0.6568079 263 7 0.7307772 53 6 0.6806505 148 7 0.9062500 18 2 0.5803571 109 7 0.6258503 45 6 0.593450 62 4 0.6065297 141 7 0.6431994 174 7 0.722522 229 7 0.661310 56 6 0.5842262 74 6 0.7246326 132 7 0.6295871 83 7 0.6036693 58 7 0.6638528 183 7 0.6831933 79 7 0.7420635 55 5 0.640589 147 7 0.6611541 211 7 0.611378 238 7 0.714852 360 7 0.6801221 138 7 0.4980436 94 7 0.43980 196 7 0.5801282 59 4 0.5182143 85 7 0.6675195 243 7 0.7335428 194 7 0.7730068 203 7 0.6866607 169 7 0.6593592 160 7 0.6608685 204 7 0.6964623 0.674477 0.6039404 0.7019262 0.689137 0.7353469 0.6565472 0.6860378 0.6396763 0.6832442 0.6608727 0.7192210 0.6769023 0.7530712 0.6825230 0.6510604 0.591063 0.6976024 0.6924760 0.727084 0.668818 0.6733693 0.715022 0.6310596 0.612712 0.6913993 0.7064261 0.7302754 0.643313 0.6741808 0.6813017 0.688580 0.6399814 0.5903774 0.59762740 0.5640622 0.645348 0.6738620 0.701922 0.7455792 0.662230 0.6658580 0.6653689 4 0.7088420 0.6945107 0.00248236 7 0.598773 0.596962 0.00181167 8.9270e-01 0.89449214 insignificant 1.00000000 1.00000 insignificant 7.6102e-01 0.87242118 insignificant 1.000000 1.00000 insignificant -0.00238503 0.918015 insignificant 1 insignificant 0.708580 0.6368098 0.0597838 7 0.544340 0.5254581 0.0188814 1.9089e-03 9.9993e-01 weaklyHypermeth 3.2354e-02 1.0000e+00 weaklyHypermeth 1.8820e-02 9.9993e-01 weaklyHypermeth 3.7519e-01 1.0000000 insignificant 0.0936866 6.5607e-02 insignificant 1.0000e+00 insignificant 0.7089967 0.710753 -0.0082136 7 0.6234668 0.7200641 -0.09659726 8.9810e-01 1.6171e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.8072e-01 3.1211e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0450303 0.14480655 insignificant 1.000000 insignificant 0.6945107 0.6371464 0.058229 7 0.596962 0.5280040 0.0689578 7.9177e-03 9.9880e-01 weaklyHypermeth 1.1996e-01 1.0000e+00 insignificant 4.0622e-02 9.9995e-01 weaklyHypermeth 6.6593e-01 1.0000e+00 insignificant 0.0960716 5.8898e-02 insignificant 1.0000e+00 insignificant 0.6945607 0.710753 -0.0090303 7 0.621202 0.7200641 -0.0988618 8.5019e-01 2.7792e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.2414e-01 3.5565e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04264527 0.1462732 insignificant 1.00000 insignificant 0.6381660 0.710753 -0.06867622 7 0.5350049 0.7200641 -0.1850592 0.9999358 1.1417e-02 weaklyHypometh 1.00000 1.9028e-01 insignificant 0.9999938 3.3055e-03 weaklyHypometh 1 1.3773e-01 insignificant -0.1387169 1.5920e-02 weaklyHypometh 4.3999e-01 insignificant chr2 114174290 114175290 8124 ENSG00000202427 0.848308 295 6 0.5735786 88 6 0.8873440 79 6 0.8489749 112 6 0.8049145 42 5 0.874485 174 6 0.8455166 81 6 0.9037524 59 4 0.6541546 63 6 0.8596380 68 5 0.8026638 169 6 0.7656695 69 6 0.7676916 122 6 NA 0 0 0.8245098 93 6 0.7297980 59 6 0.711251 66 6 0.8775910 165 6 0.8470984 80 6 0.924551 215 6 0.694444 26 2 0.8554640 49 5 0.8113862 147 6 0.9553571 31 4 0.8876263 49 5 0.8132204 126 6 0.8601190 41 5 0.7678571 37 2 0.768690 66 3 0.8762452 77 4 0.858198 101 6 0.828668 265 6 0.5912232 55 5 0.7035228 90 6 0.68173 102 6 0.7706960 76 6 0.8113044 62 6 0.6735399 118 6 0.8902040 208 6 0.8962121 211 6 0.8622470 223 6 0.8750535 224 6 0.8208416 198 6 0.8594283 0.618475 0.8957973 0.8478081 0.793022 0.8668316 0.8368460 0.8976019 0.6773797 0.8442478 0.7890489 0.7727356 0.7891873 NA 0.8474799 0.7455257 0.737442 0.9148948 0.8586856 0.917450 0.725951 0.8644750 0.811451 0.9434324 0.894702 0.8208172 0.8360499 0.7830777 0.758384 0.8611741 0.8594854 0.818609 0.6203617 0.7013487 0.67800827 0.7516262 0.809536 0.6843988 0.891777 0.9028745 0.873269 0.8849210 0.8292018 3 0.8256313 0.8285714 -0.00326079 6 0.821195 0.833594 -0.01239861 6.1506e-01 0.24461446 insignificant 1.00000000 1.00000 insignificant 9.1945e-01 0.08034928 insignificant 1.000000 1.00000 insignificant -0.02346642 0.414858 lowCoverage 1 lowCoverage 0.825631 0.7097416 0.1148349 6 0.821195 0.7153639 0.1058311 9.7529e-07 9.9999e-01 weaklyHypermeth 3.0478e-05 1.0000e+00 weaklyHypermeth 1.9719e-05 1.0000e+00 weaklyHypermeth 1.4085e-03 1.0000000 weaklyHypermeth 0.1026365 2.2358e-02 weaklyHypermeth 6.0280e-01 insignificant 0.8256313 0.870301 -0.0466248 6 0.8211950 0.8676367 -0.04644168 9.9774e-01 2.8420e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9850e-01 1.3852e-02 weaklyHypometh 1.0000e+00 9.6093e-01 insignificant -0.0609384 0.02205911 weaklyHypometh 0.882365 insignificant 0.8285714 0.7097416 0.115890 6 0.833594 0.7153639 0.1182298 3.4146e-09 1.0000e+00 weaklyHypermeth 2.2764e-07 1.0000e+00 weaklyHypermeth 3.3940e-07 1.0000e+00 weaklyHypermeth 4.2425e-05 1.0000e+00 weaklyHypermeth 0.1261029 8.0884e-03 lowCoverage 3.5167e-01 lowCoverage 0.8285714 0.870301 -0.0438882 6 0.833594 0.8676367 -0.0340431 9.7201e-01 1.1165e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 7.1525e-01 5.2198e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03747200 0.1342550 lowCoverage 1.00000 lowCoverage 0.7097416 0.870301 -0.16204700 6 0.7153639 0.8676367 -0.1522728 0.9999999 2.9675e-09 weaklyHypometh 1.00000 3.7094e-07 weaklyHypometh 1.0000000 4.1147e-07 weaklyHypometh 1 1.3716e-04 weaklyHypometh -0.1635749 2.3466e-03 weaklyHypometh 1.3334e-01 insignificant chr2 114350890 114351890 8131 ENSG00000208621 0.900301 241 6 0.7555300 281 6 0.9444444 20 2 0.9250096 208 6 0.8928571 22 1 0.857536 313 6 0.6333333 31 2 0.8042172 82 6 0.7583333 23 3 0.7142857 16 0 0.9370905 248 6 1.0000000 4 0 0.8718750 38 5 0.9642857 18 0 0.9583333 23 4 0.8000000 13 0 0.166667 6 0 0.8323900 172 6 0.9262439 71 6 0.811116 256 6 0.841775 54 5 0.8363636 33 4 0.8127081 91 6 0.7730159 53 4 0.8391026 43 4 0.8861430 221 6 0.7951763 54 5 0.6111111 16 1 0.826042 113 6 0.9249896 167 6 0.923317 211 6 0.652826 281 6 0.6313406 91 6 0.6255952 46 2 0.51500 41 3 0.5000000 2 0 0.5723058 60 5 0.8804574 147 6 0.7823129 120 6 0.7754193 260 6 0.9115721 400 6 1.0000000 34 4 0.9126488 193 6 0.8758238 0.809906 0.9107143 0.9258179 0.770408 0.8799582 0.7589286 0.6975244 0.7500000 0.7321429 0.8825325 0.8674609 0.8705357 0.9330357 0.9546636 0.9993065 0.525719 0.8638736 0.9227580 0.861060 0.819643 0.7548701 0.745698 0.8605442 0.923077 0.8180740 0.8919295 0.6250000 0.837946 0.9053789 0.8872522 0.820899 0.8824405 0.8494898 0.67597128 0.6868344 0.847180 0.9304648 0.901361 0.9013700 0.855533 1.0000000 0.8929369 0 0.8973129 0.8930441 -0.00688219 6 0.794010 0.775527 0.01848222 5.9148e-01 0.22844512 insignificant 1.00000000 1.00000 insignificant 1.2327e-01 0.98107068 insignificant 1.000000 1.00000 insignificant 0.01247837 0.800558 lowCoverage 1 lowCoverage 0.897695 0.6950904 0.1873245 6 0.830761 0.6973210 0.1334397 2.7800e-08 7.3120e-01 weaklyHypermeth 1.0692e-06 1.0000e+00 weaklyHypermeth 2.1512e-03 6.8691e-01 weaklyHypermeth 6.9394e-02 1.0000000 weaklyHypermeth 0.2019093 1.4652e-02 lowCoverage 5.0526e-01 lowCoverage 0.8973129 0.904667 -0.0102119 6 0.7940096 0.7738530 0.02015655 7.8639e-01 6.5083e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 7.4691e-01 4.5718e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0536982 0.38021270 lowCoverage 1.000000 lowCoverage 0.8947368 0.6950904 0.180534 6 0.801040 0.6973210 0.1037186 6.1692e-06 4.2681e-01 weaklyHypermeth 1.8695e-04 1.0000e+00 weaklyHypermeth 1.6640e-02 2.9919e-01 weaklyHypermeth 3.3279e-01 1.0000e+00 insignificant 0.1894309 1.8089e-02 lowCoverage 5.4727e-01 lowCoverage 0.8930441 0.904667 -0.0086811 6 0.775527 0.7738530 0.0016743 2.4079e-01 5.0371e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 8.4654e-01 1.0455e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.06617654 0.2331773 lowCoverage 1.00000 lowCoverage 0.6950904 0.905567 -0.20546950 6 0.6973210 0.8705846 -0.1732636 0.9935897 7.0127e-03 weaklyHypometh 1.00000 1.2708e-01 insignificant 0.9980936 2.5293e-02 weaklyHypometh 1 5.2693e-01 insignificant -0.2556075 5.9579e-03 lowCoverage 2.7082e-01 lowCoverage chr2 119653690 119654690 8188 ENSG00000208545,ENSG00000222700 0.650846 125 6 0.6115002 177 6 0.5404040 51 6 0.5426829 129 3 0.7166667 31 4 0.606061 66 3 0.6212121 48 6 0.6371212 61 6 0.5680556 61 6 0.5416667 24 0 0.6130851 138 6 0.5777778 26 3 0.7512059 54 6 0.8750000 30 3 0.6250000 50 3 0.6666667 15 3 0.777778 9 0 0.6374104 156 4 0.7415414 81 6 0.760088 58 3 0.700000 9 0 0.6666667 3 0 0.6507353 52 3 0.7222222 24 3 0.7797101 73 3 0.6303855 118 6 0.4444444 22 3 0.5233333 16 1 0.642996 87 6 0.7781895 116 6 0.660294 147 6 0.731868 42 3 0.5489035 87 6 0.6727891 94 6 0.59382 77 6 0.7083333 17 0 0.4607843 73 6 0.6547619 106 6 0.5679211 107 6 0.7120405 110 6 0.6237574 117 6 0.8425926 57 3 0.6732026 75 6 0.6008088 0.558840 0.6408046 0.5874685 0.670402 0.6140780 0.5821317 0.6092999 0.6413793 0.5043103 0.6772153 0.6660920 0.6590685 0.7500000 0.6773399 0.6730122 0.644198 0.6471991 0.6030594 0.682329 0.646552 0.6468786 0.654665 0.6206897 0.650175 0.7435687 0.6459770 0.5287356 0.585429 0.7950400 0.6107608 0.728122 0.5287659 0.6069787 0.56451431 0.5948276 0.533088 0.6005747 0.559659 0.7317504 0.610267 0.7011494 0.5781738 0 0.6222865 0.6798307 -0.04831276 6 0.656931 0.591715 0.06521675 7.0904e-01 0.00979237 weaklyHypometh 1.00000000 1.00000 insignificant 5.2517e-01 0.01604737 weaklyHypometh 1.000000 1.00000 insignificant -0.00781533 0.824223 lowCoverage 1 lowCoverage 0.622287 0.5881057 0.0451142 6 0.656931 0.6487137 0.0082177 2.1577e-02 8.8289e-01 weaklyHypermeth 3.0390e-01 1.0000e+00 insignificant 1.4771e-01 8.8848e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0465234 3.0451e-01 lowCoverage 1.0000e+00 lowCoverage 0.6223827 0.620172 0.0057860 6 0.6497885 0.6785247 -0.02873617 5.9552e-01 5.2250e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.1641e-01 5.2860e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0308144 0.56689154 lowCoverage 1.000000 lowCoverage 0.6798307 0.5881057 0.094254 6 0.591715 0.6487137 -0.0569991 1.8353e-03 9.9999e-01 weaklyHypermeth 3.1642e-02 1.0000e+00 weaklyHypermeth 2.8061e-02 9.6264e-01 weaklyHypermeth 4.8381e-01 1.0000e+00 insignificant 0.0543387 2.7086e-01 lowCoverage 1.0000e+00 lowCoverage 0.6817539 0.618534 0.0576333 6 0.690334 0.6249455 0.0653883 1.5852e-02 8.9253e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 1.0485e-01 6.1391e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02299909 0.6847197 lowCoverage 1.00000 lowCoverage 0.5871965 0.618534 -0.03789408 6 0.5901660 0.6249455 -0.0347795 0.6104414 5.5149e-02 insignificant 1.00000 7.3591e-01 insignificant 0.9112372 1.0343e-01 insignificant 1 1.0000e+00 insignificant -0.0773378 2.3000e-01 insignificant 1.0000e+00 insignificant chr2 120168290 120169290 8200 TMEM177 ENSG00000144120 0.761689 360 7 0.5358171 190 7 0.5794544 148 7 0.7508223 290 7 0.5888656 84 7 0.801415 382 7 0.7018141 85 7 0.5479600 170 7 0.5872349 180 6 0.6186927 159 7 0.7079452 168 7 0.6255970 97 6 0.4549024 340 7 0.7320988 114 6 0.6237671 246 7 0.6726190 61 2 0.713605 44 6 0.6865934 379 7 0.6425641 158 7 0.732945 275 7 0.662291 141 7 0.5186869 202 7 0.8203490 150 7 0.6667490 147 7 0.7350340 95 6 0.6886130 221 7 0.5693354 123 7 0.7204189 100 5 0.573377 173 7 0.5594015 267 7 0.584505 215 7 0.743999 276 7 0.5553439 233 7 0.5715828 165 7 0.66667 49 4 0.5906201 53 7 0.4240961 156 7 0.4881075 215 7 0.6329815 312 7 0.5887275 262 7 0.6059124 261 7 0.7202252 209 6 0.6606366 297 7 0.7629540 0.538805 0.6032943 0.7497563 0.530055 0.7808138 0.7032016 0.6322157 0.6108402 0.6152667 0.7163659 0.7391730 0.4358148 0.7158041 0.6276515 0.7350094 0.725388 0.6939058 0.6110606 0.729430 0.654234 0.5183623 0.806903 0.6022307 0.726231 0.6800812 0.5771402 0.7414883 0.546731 0.5439981 0.5221871 0.746934 0.5270680 0.5546444 0.66712060 0.6229586 0.381618 0.4598781 0.656406 0.5862143 0.614271 0.7043965 0.6421817 6 0.6679389 0.6085308 0.04146859 7 0.626291 0.675860 -0.04956902 1.0888e-01 0.93936383 insignificant 1.00000000 1.00000 insignificant 2.1626e-01 0.84046205 insignificant 1.000000 1.00000 insignificant -0.00024312 0.994215 insignificant 1 insignificant 0.668195 0.4845006 0.1618377 7 0.668142 0.5227807 0.1453618 9.7263e-09 8.1487e-01 weaklyHypermeth 4.2288e-07 1.0000e+00 weaklyHypermeth 1.5965e-04 4.2293e-01 weaklyHypermeth 7.2568e-03 1.0000000 weaklyHypermeth 0.1039173 2.8757e-02 weaklyHypermeth 7.1893e-01 insignificant 0.6681946 0.633110 0.0296597 7 0.6681424 0.6435340 0.02460841 2.2960e-01 5.3446e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.2081e-01 6.7787e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0116235 0.70938350 insignificant 1.000000 insignificant 0.6081594 0.4845006 0.119924 7 0.629555 0.5227807 0.1067740 4.1380e-06 5.1693e-01 weaklyHypermeth 1.2931e-04 1.0000e+00 weaklyHypermeth 4.1581e-04 4.2410e-01 weaklyHypermeth 1.9801e-02 1.0000e+00 weaklyHypermeth 0.1041604 3.5560e-02 weaklyHypermeth 7.5660e-01 insignificant 0.6081594 0.633110 -0.0019831 7 0.629555 0.6435340 -0.0139794 6.0980e-01 7.0174e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 4.4404e-01 1.3394e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01186664 0.7420124 insignificant 1.00000 insignificant 0.4845006 0.633110 -0.12054132 7 0.5227807 0.6435340 -0.1207533 0.9762614 1.8272e-04 weaklyHypometh 1.00000 6.3007e-03 weaklyHypometh 0.8347229 3.5205e-02 weaklyHypometh 1 6.4009e-01 insignificant -0.0922938 5.4906e-02 insignificant 1.0000e+00 insignificant chr2 121040590 121041590 8223 INHBB ENSG00000163083 0.839436 310 9 0.7905042 246 10 0.7550149 231 10 0.8942407 242 5 0.8776429 139 10 0.823390 469 10 0.7957173 220 9 0.7523754 273 10 0.7271981 178 9 0.7963193 159 10 0.9027462 365 10 0.6425620 51 3 0.7764792 340 10 0.8516424 149 5 0.8333939 190 8 0.6731481 68 4 0.550000 19 0 0.6789911 287 5 0.8851950 333 7 0.792725 430 10 0.806061 117 9 0.5892687 126 8 0.9247078 188 7 0.7656458 176 10 0.8353175 81 5 0.8421555 282 10 0.6995375 194 9 0.6993386 95 8 0.822196 305 8 0.8014041 391 10 0.815590 303 10 0.922744 373 10 0.5512550 220 10 0.7644744 132 7 0.60829 215 6 0.7592593 15 0 0.5870690 194 10 0.6690419 340 10 0.4219137 337 7 0.3791895 264 6 0.5263892 183 5 0.5503519 288 6 0.6518366 186 5 0.8101998 0.746901 0.7822800 0.8122371 0.827799 0.8738228 0.7732373 0.7346089 0.8061658 0.8793376 0.8932005 0.7805916 0.8095427 0.8251969 0.8164895 0.6744844 0.577540 0.6809139 0.8784713 0.833868 0.862063 0.5219563 0.907869 0.8665140 0.810214 0.8010899 0.7185930 0.9106072 0.765451 0.7620549 0.7963927 0.900027 0.5692867 0.7397066 0.45142230 0.8183464 0.752971 0.6052085 0.524007 0.5273735 0.633907 0.5367033 0.6626719 5 0.8146414 0.7972613 0.01165582 10 0.765938 0.727542 0.03839584 6.6997e-01 0.77853243 insignificant 1.00000000 1.00000 insignificant 9.0798e-01 0.51720729 insignificant 1.000000 1.00000 insignificant -0.01172766 0.735715 insignificant 1 insignificant 0.814641 0.6039427 0.2007119 10 0.765938 0.5431810 0.2227569 1.1347e-13 1.0000e+00 hypermethylated 1.0315e-11 1.0000e+00 hypermethylated 1.4303e-03 9.9975e-01 weaklyHypermeth 5.1083e-02 1.0000000 weaklyHypermeth 0.1253720 1.6804e-02 weaklyHypermeth 5.6013e-01 insignificant 0.8147754 0.587440 0.2342271 6 0.7901141 0.4833309 0.30678321 6.7733e-27 1.0000e+00 hypermethylated 6.7733e-24 1.0000e+00 hypermethylated 5.2630e-10 1.0000e+00 hypermethylated 5.2630e-07 1.0000e+00 hypermethylated 0.2759999 0.00245161 weaklyHypermeth 0.272402 insignificant 0.7972613 0.6039427 0.190606 10 0.727542 0.5431810 0.1843610 4.2603e-08 1.0000e+00 weaklyHypermeth 2.1302e-06 1.0000e+00 weaklyHypermeth 7.7481e-03 9.9974e-01 weaklyHypermeth 1.9370e-01 1.0000e+00 insignificant 0.1370997 1.2831e-02 weaklyHypermeth 4.5827e-01 insignificant 0.7978683 0.587440 0.2355511 6 0.793682 0.4833309 0.3103514 6.6307e-18 1.0000e+00 hypermethylated 6.6307e-15 1.0000e+00 hypermethylated 4.0302e-09 1.0000e+00 hypermethylated 4.0302e-06 1.0000e+00 hypermethylated 0.28772760 0.0014505 weaklyHypermeth 0.52240 insignificant 0.6055705 0.587440 0.05002736 6 0.5925611 0.4833309 0.1092303 0.0014569 8.1241e-01 weaklyHypermeth 0.48564 1.0000e+00 insignificant 0.0086818 9.7826e-01 weaklyHypermeth 1 1.0000e+00 insignificant 0.1506279 3.8702e-02 weaklyHypermeth 7.8984e-01 insignificant chr2 121143890 121144890 8224 ENSG00000201006 0.766196 494 9 0.7903655 747 9 0.8749422 383 9 0.8617630 361 9 0.8898211 335 9 0.883302 890 9 0.8621371 483 9 0.8947921 418 9 0.8254158 306 9 0.7851961 307 9 0.8570823 620 9 0.8729949 170 9 0.8454698 325 9 0.7931834 272 9 0.8798687 414 9 0.8210088 214 8 0.147059 18 1 0.8385581 625 9 0.8549465 700 9 0.853691 809 9 0.816289 173 9 0.7722222 63 4 0.8378204 479 9 0.8279848 249 9 0.9117647 49 3 0.8490868 751 9 0.8352681 403 9 0.7332997 280 9 0.871365 732 9 0.8601863 783 9 0.838049 738 9 0.878028 574 9 0.7599202 471 9 0.7880910 414 9 0.72846 501 8 0.0000000 9 1 0.6236835 375 9 0.8322826 847 9 0.8064842 645 9 0.8721910 486 9 0.8276661 411 9 0.7542874 691 9 0.8906481 358 9 0.8373366 0.771792 0.8432431 0.8330665 0.884960 0.8550469 0.8170281 0.8707442 0.8290518 0.8291489 0.8325958 0.8661974 0.8055465 0.8593371 0.8526549 0.7725696 NA 0.8207089 0.8418621 0.822887 0.813654 0.8491966 0.805862 0.8340002 0.873524 0.8374022 0.8249855 0.8772849 0.848987 0.8207268 0.8295264 0.860698 0.7066572 0.7900490 0.60809541 NA 0.679599 0.8235702 0.890137 0.8515274 0.822716 0.8120391 0.8603529 8 0.8534473 0.8719894 -0.00268184 9 0.811109 0.844021 -0.03291173 7.7792e-01 0.31197478 insignificant 1.00000000 1.00000 insignificant 7.1475e-01 0.10784154 insignificant 1.000000 1.00000 insignificant -0.02605732 0.503559 insignificant 1 insignificant 0.853447 0.7917463 0.0928088 9 0.811109 0.6758642 0.1352451 5.4096e-10 9.9999e-01 weaklyHypermeth 3.0054e-08 1.0000e+00 weaklyHypermeth 2.9787e-04 9.9898e-01 weaklyHypermeth 1.2951e-02 1.0000000 weaklyHypermeth 0.1878168 2.0802e-01 insignificant 1.0000e+00 insignificant 0.8534473 0.890390 -0.0115414 9 0.8111093 0.8275193 -0.01641004 9.5636e-01 2.7511e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3043e-01 3.1542e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0203657 0.64300834 insignificant 1.000000 insignificant 0.8719894 0.7917463 0.098874 9 0.844021 0.6758642 0.1681568 2.6460e-07 1.0000e+00 weaklyHypermeth 1.0584e-05 1.0000e+00 weaklyHypermeth 1.1084e-03 9.9999e-01 weaklyHypermeth 3.9585e-02 1.0000e+00 weaklyHypermeth 0.2138741 1.5536e-01 insignificant 1.0000e+00 insignificant 0.8719894 0.890390 -0.0090502 9 0.844021 0.8275193 0.0165017 7.2180e-01 2.9350e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.9645e-01 3.6384e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00569162 0.8439522 insignificant 1.00000 insignificant 0.7917463 0.890390 -0.10984253 9 0.6758642 0.8275193 -0.1516551 0.9999930 2.4363e-05 weaklyHypometh 1.00000 1.0151e-03 weaklyHypometh 0.9998644 6.1380e-03 weaklyHypometh 1 1.9800e-01 insignificant -0.2081825 1.6617e-01 insignificant 1.0000e+00 insignificant chr2 121196290 121197290 8227 ENSG00000201006 0.923019 271 7 0.8324284 365 9 0.7777262 221 7 0.9090337 346 5 0.8867570 206 9 0.896637 358 9 0.8704520 387 9 0.8557208 208 9 0.8660406 305 7 0.9135619 282 7 0.8711559 345 9 0.8537341 225 7 0.8416585 258 6 0.7788653 150 5 0.9246522 315 7 0.9393141 241 8 0.866158 115 6 0.8378584 351 4 0.8816497 188 6 0.780434 237 6 0.846032 50 5 0.6897985 109 4 0.8618490 228 8 0.7563350 124 8 0.8629997 156 7 0.8492942 367 9 0.8065416 111 7 0.8920548 112 7 0.937421 196 6 0.9063094 379 9 0.917996 309 9 0.938604 229 7 0.4287741 282 9 0.4715152 167 6 0.66667 119 2 0.5889520 71 7 0.2947919 199 9 0.7253707 251 7 0.9356214 249 5 0.8914465 243 7 0.6090274 290 4 0.8547112 279 4 0.7893930 304 7 0.8926571 0.820749 0.7487567 0.8805607 0.866121 0.8443027 0.8533976 0.8297528 0.7933146 0.8871462 0.8629239 0.7855512 0.7672592 0.8247272 0.8864141 0.8883218 0.876452 0.7660959 0.7722474 0.824126 0.898769 0.8052606 0.818724 0.7861406 0.850810 0.8566617 0.8385882 0.8742491 0.930480 0.8555545 0.9170018 0.922543 0.3639593 0.2221158 0.62769362 0.3447762 0.385832 0.6503165 0.892106 0.9082795 0.832177 0.8400064 0.7518167 4 0.8386677 0.8636556 -0.03134971 8 0.770585 0.889311 -0.11872673 9.9738e-01 0.02336591 weaklyHypometh 1.00000000 1.00000 insignificant 8.0411e-01 0.18215750 insignificant 1.000000 1.00000 insignificant 0.00990665 0.685798 insignificant 1 insignificant 0.838824 0.3694853 0.4291104 8 0.856205 0.4715364 0.3846688 1.7235e-43 1.0000e+00 hypermethylated 1.3785e-40 1.0000e+00 hypermethylated 1.8278e-10 1.0000e+00 hypermethylated 4.5695e-08 1.0000000 hypermethylated 0.3359978 3.3918e-03 weaklyHypermeth 1.6151e-01 insignificant 0.8388237 0.813187 -0.0051873 5 0.8562052 0.8374850 0.01872026 1.5077e-01 1.5536e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.8088e-01 1.5774e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0493030 0.44034192 insignificant 1.000000 insignificant 0.8636556 0.3691460 0.472081 9 0.889311 0.4243828 0.4649287 8.3479e-29 1.0000e+00 hypermethylated 2.0870e-26 1.0000e+00 hypermethylated 3.6650e-08 1.0000e+00 hypermethylated 9.1624e-06 1.0000e+00 hypermethylated 0.3260911 3.1161e-03 weaklyHypermeth 1.6838e-01 insignificant 0.8635980 0.813187 0.0327304 5 0.877013 0.8374850 0.0395277 3.7702e-02 4.5536e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 2.5924e-01 5.7369e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03939634 0.5456647 insignificant 1.00000 insignificant 0.3694853 0.813187 -0.53214410 5 0.4715364 0.8374850 -0.3659486 1.0000000 7.3799e-17 hypomethylated 1.00000 2.4600e-14 hypomethylated 0.9999252 2.4130e-05 hypomethylated 1 2.6811e-03 hypomethylated -0.2866948 9.2887e-03 weaklyHypometh 3.7155e-01 insignificant chr2 121237590 121238590 8230 ENSG00000201006 0.897187 367 9 0.8276257 283 10 0.8764616 120 9 0.8923545 372 9 0.9472527 95 9 0.938071 470 9 0.8258498 186 9 0.8824980 174 9 0.8534052 136 9 0.9596154 98 5 0.8695359 377 10 0.9043070 69 5 0.9184875 111 5 0.8789683 68 8 0.9222534 132 8 0.9600000 54 5 0.928571 31 2 0.8530788 384 8 0.8766842 183 9 0.919468 238 9 0.886051 120 5 0.8275309 107 8 0.9566667 135 9 0.8888745 83 8 0.8589060 475 10 0.9415048 245 10 0.9381598 117 7 0.8392857 110 9 0.894571 189 9 0.9417489 316 10 0.914832 310 10 0.927824 338 10 0.6499531 205 10 0.7907066 268 9 0.79201 264 6 0.7046667 260 9 0.7694337 165 10 0.6489648 450 10 0.8150718 328 9 0.9100048 256 10 0.8621508 266 9 0.9086215 355 9 0.9508720 240 11 0.8552994 0.811011 0.8377242 0.9344257 0.930953 0.9240767 0.8888657 0.8386316 0.8573525 0.9460316 0.8489553 0.8703323 0.8939407 0.9297959 0.9147180 0.9529982 NA 0.7870832 0.8898074 0.897493 0.862947 0.7649743 0.903902 0.8579386 0.835068 0.9085816 0.9039708 0.8467890 0.884889 0.9418318 0.8625310 0.907317 0.5811582 0.7424952 0.79396086 0.4936224 0.761685 0.5414914 0.818359 0.8610797 0.808913 0.8949469 0.9135392 5 0.8902408 0.8966195 -0.01054547 9 0.894675 0.911112 -0.01643635 8.9307e-01 0.06559191 insignificant 1.00000000 1.00000 insignificant 6.4105e-01 0.03100636 weaklyHypometh 1.000000 1.00000 insignificant -0.00474574 0.758612 insignificant 1 insignificant 0.890241 0.6625310 0.1942272 9 0.894675 0.7477583 0.1469172 9.2763e-13 9.9950e-01 weaklyHypermeth 7.7303e-11 1.0000e+00 weaklyHypermeth 1.4394e-06 9.9993e-01 weaklyHypermeth 1.7992e-04 1.0000000 weaklyHypermeth 0.1706274 9.8072e-04 weaklyHypermeth 6.5381e-02 weaklyHypermeth 0.8903242 0.887889 0.0124124 9 0.9042504 0.8939364 0.01031404 4.7671e-01 5.5334e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.1400e-01 7.9695e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0072396 0.78280501 insignificant 1.000000 insignificant 0.8966195 0.6625310 0.216221 9 0.911112 0.7477583 0.1633535 2.7279e-13 9.9998e-01 hypermethylated 3.0310e-11 1.0000e+00 hypermethylated 2.2283e-07 1.0000e+00 hypermethylated 3.7139e-05 1.0000e+00 hypermethylated 0.1753731 6.1505e-04 weaklyHypermeth 4.7311e-02 weaklyHypermeth 0.8966195 0.887344 0.0295719 9 0.911112 0.8833300 0.0277818 3.8861e-03 6.9258e-01 weaklyHypermeth 3.8861e-01 1.0000e+00 insignificant 6.1977e-03 6.9133e-01 weaklyHypermeth 6.1976e-01 1.0000e+00 insignificant 0.01198534 0.6642466 insignificant 1.00000 insignificant 0.6625310 0.887344 -0.18925083 9 0.7477583 0.8833300 -0.1355717 0.9997873 5.4404e-06 weaklyHypometh 1.00000 3.2652e-04 weaklyHypometh 0.9999035 7.7562e-05 weaklyHypometh 1 7.0511e-03 weaklyHypometh -0.1633878 1.4168e-03 weaklyHypometh 1.0789e-01 insignificant chr2 121408490 121409490 8240 GLI2 ENSG00000074047 0.874268 404 6 0.8144262 238 5 0.5666268 132 5 0.8814792 301 6 0.8879269 78 5 0.894602 373 6 0.9305241 158 5 0.9331765 161 5 0.8815483 156 5 0.9255556 137 4 0.9061348 260 5 0.9120460 104 4 0.8041015 142 5 0.7380952 30 2 0.8410496 140 5 0.8166667 111 5 0.833987 71 3 0.5232537 488 6 0.8802119 200 6 0.913668 316 6 0.907108 62 5 0.7018599 71 4 0.8886407 207 5 0.9370370 68 4 0.7575049 103 5 0.8693403 264 6 0.6748052 62 5 0.8809524 90 5 0.750217 187 5 0.9124145 326 6 0.877328 306 6 0.913938 296 6 0.1384314 213 5 0.2589474 139 5 0.16667 199 6 0.1995423 88 4 0.2240741 247 5 0.1129761 369 6 0.7571454 314 6 0.7190474 277 6 0.7951009 275 6 0.7134035 333 6 0.7788420 254 6 0.8945148 0.821395 0.5688800 0.8975520 0.844504 0.9123874 0.9153702 0.9498143 0.8990935 0.9523683 0.8773758 0.8710085 0.8256865 0.8391320 0.8058751 0.8239044 0.845572 0.5685092 0.9027602 0.949981 0.906814 0.6975742 0.873513 0.9023904 0.745223 0.8783415 0.7056070 0.9299943 0.768057 0.9377469 0.8981902 0.900908 0.1805484 0.2962047 0.26693227 0.1966869 0.247602 0.1430362 0.784678 0.7487686 0.844241 0.7867793 0.8418741 4 0.8394197 0.8643487 -0.02961849 5 0.858319 0.852559 0.00575988 5.1039e-01 0.23969740 insignificant 1.00000000 1.00000 insignificant 7.4980e-01 0.56504181 insignificant 1.000000 1.00000 insignificant -0.00129477 0.971898 lowCoverage 1 lowCoverage 0.839380 0.1338645 0.6854719 6 0.834705 0.1599410 0.6747642 2.7569e-43 1.0000e+00 hypermethylated 1.3785e-40 1.0000e+00 hypermethylated 1.9329e-12 1.0000e+00 hypermethylated 9.6643e-10 1.0000000 hypermethylated 0.6545277 1.3768e-13 lowCoverage 6.8839e-11 lowCoverage 0.8393795 0.783895 0.0537518 6 0.8347052 0.7451359 0.08956929 2.3779e-04 9.3996e-01 weaklyHypermeth 4.7558e-02 1.0000e+00 weaklyHypermeth 1.7007e-03 9.9981e-01 weaklyHypermeth 2.1258e-01 1.0000e+00 insignificant 0.0852595 0.00931883 lowCoverage 0.665631 lowCoverage 0.8645066 0.1338645 0.703433 5 0.861319 0.1599410 0.7013777 1.6366e-45 1.0000e+00 hypermethylated 1.6366e-42 1.0000e+00 hypermethylated 6.2005e-11 1.0000e+00 hypermethylated 3.1003e-08 1.0000e+00 hypermethylated 0.6558225 5.0596e-12 hypermethylated 5.0596e-09 hypermethylated 0.8645066 0.783895 0.0968603 5 0.861319 0.7451359 0.1161828 2.1175e-05 9.9959e-01 weaklyHypermeth 4.2350e-03 1.0000e+00 weaklyHypermeth 1.6952e-03 9.9925e-01 weaklyHypermeth 2.8254e-01 1.0000e+00 insignificant 0.08655431 0.0135200 weaklyHypermeth 1.00000 insignificant 0.1338645 0.783895 -0.62533561 6 0.1599410 0.7451359 -0.5851949 1.0000000 4.8116e-30 hypomethylated 1.00000 4.8116e-27 hypomethylated 0.9999999 8.5263e-08 hypomethylated 1 4.2632e-05 hypomethylated -0.5692682 1.1493e-08 hypomethylated 1.1493e-05 hypomethylated chr2 127538390 127539390 8293 ENSG00000206963 0.360430 213 10 0.2495561 294 11 0.3078576 243 11 0.3103174 179 8 0.3140985 133 10 0.624691 330 11 0.3541307 187 11 0.2688668 254 11 0.2943725 272 11 0.4686745 218 11 0.6758217 360 11 0.2052391 180 11 0.1596119 470 11 0.1544012 96 6 0.2891873 333 11 0.1544986 169 10 0.150383 176 11 0.0909660 293 9 0.2175361 257 11 0.319534 266 11 0.469477 119 11 0.0949767 270 6 0.5894284 203 11 0.4100273 109 10 0.3846197 184 6 0.3454037 346 11 0.3921512 201 11 0.2183150 183 9 0.381706 289 11 0.3547846 429 11 0.296433 399 11 0.650058 365 11 0.0044333 331 11 0.0241844 266 11 0.00000 184 7 0.0064935 85 6 0.0085509 192 10 0.0000000 368 11 0.2308382 348 11 0.1737663 354 11 0.2350357 182 9 0.1930569 261 9 0.2097696 216 10 0.3290634 0.220930 0.2371413 0.3193325 0.327016 0.5421000 0.3431009 0.3000969 0.2354123 0.4286517 0.6988253 0.1616063 0.1604800 0.1897861 0.2528055 0.1570096 0.137849 0.0934830 0.1890197 0.314175 0.423063 0.0440987 0.535613 0.4559868 0.389591 0.3529304 0.3278996 0.1521517 0.444614 0.3319626 0.2192690 0.654473 0.0054101 0.0311178 0.00000000 0.0077793 0.015816 0.0000000 0.165830 0.1401338 0.229625 0.1596526 0.2028906 6 0.3022547 0.3684211 -0.06586807 11 0.313131 0.395675 -0.08254379 9.9983e-01 0.00471307 weaklyHypometh 1.00000000 1.00000 insignificant 9.9998e-01 0.00262700 weaklyHypometh 1.000000 1.00000 insignificant -0.08377299 0.137247 insignificant 1 insignificant 0.302255 0.0070126 0.2973736 11 0.313131 0.0051650 0.3079663 5.2734e-26 1.0000e+00 hypermethylated 1.3184e-23 1.0000e+00 hypermethylated 4.4863e-24 1.0000e+00 hypermethylated 4.4863e-21 1.0000000 hypermethylated 0.2912317 4.6361e-08 hypermethylated 7.8791e-06 hypermethylated 0.3022547 0.192506 0.1046861 10 0.3131313 0.1993115 0.11381983 1.2880e-03 9.9885e-01 weaklyHypermeth 1.6100e-01 1.0000e+00 insignificant 1.1647e-03 9.9473e-01 weaklyHypermeth 1.9411e-01 1.0000e+00 insignificant 0.0900154 0.01890016 weaklyHypermeth 0.882365 insignificant 0.3684211 0.0070126 0.364643 11 0.395675 0.0051650 0.3905101 5.5176e-29 1.0000e+00 hypermethylated 1.8392e-26 1.0000e+00 hypermethylated 7.6720e-20 1.0000e+00 hypermethylated 7.6720e-17 1.0000e+00 hypermethylated 0.3750047 2.5599e-06 hypermethylated 5.2661e-04 hypermethylated 0.3684211 0.192506 0.1674451 10 0.395675 0.1993115 0.1963636 3.6494e-06 1.0000e+00 weaklyHypermeth 9.1234e-04 1.0000e+00 weaklyHypermeth 1.4195e-05 1.0000e+00 weaklyHypermeth 3.5487e-03 1.0000e+00 weaklyHypermeth 0.17378837 0.0018984 weaklyHypermeth 0.52240 insignificant 0.0070126 0.192506 -0.18220222 10 0.0051650 0.1993115 -0.1941465 1.0000000 3.5268e-23 weaklyHypometh 1.00000 1.7634e-20 weaklyHypometh 1.0000000 5.1444e-13 weaklyHypometh 1 5.1444e-10 weaklyHypometh -0.2012163 1.9359e-05 hypomethylated 6.4531e-03 hypomethylated chr2 127874690 127875690 8308 MAP3K2 ENSG00000169967 0.787168 885 20 0.5939562 395 20 0.4430068 393 20 0.7377738 779 23 0.6520238 168 13 0.772658 798 21 0.6332395 241 22 0.7914329 481 22 0.7536109 305 20 0.7020857 434 20 0.7639928 489 23 0.3235479 529 21 0.8966203 377 21 0.8093105 155 10 0.7432235 474 21 0.3058512 479 18 0.569234 156 15 0.4960489 898 20 0.7450583 316 20 0.855849 508 19 0.748686 137 12 0.7165852 308 21 0.7354140 441 20 0.8501268 130 13 0.8027592 303 23 0.7589387 535 21 0.7323990 314 17 0.6425650 137 15 0.699498 334 21 0.9191316 473 21 0.775903 488 23 0.422957 917 21 0.5292434 336 18 0.7418296 335 21 0.58148 463 6 0.6488017 260 21 0.5449608 227 19 0.6499246 482 23 0.8648771 853 21 0.7191051 887 21 0.8237544 804 21 0.8667667 738 20 0.6026615 1136 23 0.7820223 0.575676 0.4756000 0.8184796 0.646486 0.7395460 0.6487077 0.8043684 0.7368378 0.6493553 0.7340038 0.3590302 0.8849537 0.7296045 0.8007277 0.3029696 0.580767 0.5520986 0.8417000 0.869144 0.814852 0.6419887 0.830520 0.8613816 0.779484 0.8944485 0.7917088 0.7488558 0.711818 0.9015543 0.7762574 0.376401 0.5177601 0.7275566 0.56945487 0.6283443 0.614317 0.6246641 0.870648 0.6985907 0.799734 0.8457881 0.5757833 14 0.6811015 0.7207807 -0.02762544 21 0.608308 0.634442 -0.02613385 9.7039e-01 0.13000723 insignificant 1.00000000 1.00000 insignificant 1.0000e+00 0.00094623 weaklyHypometh 1.000000 0.94623 insignificant -0.06496242 0.214267 insignificant 1 insignificant 0.681332 0.6287482 0.0618652 21 0.617500 0.5554217 0.0620787 1.2025e-03 3.0332e-01 weaklyHypermeth 2.1473e-02 1.0000e+00 weaklyHypermeth 1.3811e-02 2.6981e-01 weaklyHypermeth 2.9384e-01 1.0000000 insignificant 0.0527454 3.0061e-01 insignificant 1.0000e+00 insignificant 0.6828132 0.754866 -0.0667861 21 0.6736676 0.7428933 -0.06922577 9.9938e-01 1.3042e-02 weaklyHypometh 1.0000e+00 9.3158e-01 insignificant 9.9995e-01 4.2862e-03 weaklyHypometh 1.0000e+00 5.3578e-01 insignificant -0.1066483 0.12534569 insignificant 1.000000 insignificant 0.7212823 0.6281503 0.090906 21 0.632014 0.5369077 0.0951059 9.3862e-06 5.3349e-01 weaklyHypermeth 2.7607e-04 1.0000e+00 weaklyHypermeth 1.8920e-05 9.8307e-01 weaklyHypermeth 1.2613e-03 1.0000e+00 weaklyHypermeth 0.1177078 2.6934e-02 weaklyHypermeth 6.4904e-01 insignificant 0.7231525 0.754866 -0.0357039 21 0.693303 0.7428933 -0.0495901 7.7269e-01 9.8336e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 4.3559e-01 6.3940e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04168592 0.5184131 insignificant 1.00000 insignificant 0.6327412 0.754811 -0.12912897 21 0.6154003 0.7326091 -0.1172087 0.9737522 1.2010e-05 weaklyHypometh 1.00000 5.4592e-04 weaklyHypometh 0.9821018 8.5640e-04 weaklyHypometh 1 4.5073e-02 weaklyHypometh -0.1593937 3.3381e-02 weaklyHypometh 7.2568e-01 insignificant chr2 127881690 127882690 8309 MAP3K2 ENSG00000169967 0.033685 1270 38 0.0334475 952 41 0.0063102 1394 39 0.0105687 1263 33 0.0098934 888 34 0.038576 1283 42 0.0514698 1174 40 0.0108574 1147 40 0.0089064 1451 40 0.0092533 1805 40 0.0071852 966 40 0.0080741 1742 37 0.0385882 1548 37 0.0059649 628 30 0.0162949 1704 37 0.0059145 1368 35 0.012285 818 32 0.0219365 1485 37 0.0028674 764 36 0.037225 1233 42 0.050924 477 31 0.0282734 933 33 0.0770789 874 37 0.0165303 824 40 0.0486407 710 32 0.0041289 1352 39 0.0176995 891 38 0.0140061 616 39 0.010254 936 36 0.0095363 1350 42 0.057051 1271 38 0.055554 1209 42 0.0261905 858 40 0.0436151 677 37 0.10204 535 18 0.0119658 524 31 0.0583557 406 38 0.0173810 896 39 0.0465851 1653 37 0.0615434 1186 37 0.0088868 1216 34 0.0238143 1076 33 0.0348258 1339 37 0.0086904 0.011424 0.0073608 0.0131613 0.010812 0.0150444 0.0048283 0.0094381 0.0090142 0.0089973 0.0093322 0.0098453 0.0115504 0.0071565 0.0130729 0.0086667 0.015962 0.0176893 0.0019116 0.026087 0.034253 0.0167739 0.010506 0.0027383 0.010943 0.0060145 0.0060206 0.0108426 0.013775 0.0120645 0.0099342 0.017764 0.0330162 0.0434379 0.04789539 0.0161982 0.053684 0.0198115 0.032963 0.0432833 0.010278 0.0229345 0.0281570 30 0.0114134 0.0130211 -0.00157399 41 0.047532 0.039985 0.00754614 9.5641e-01 0.34212622 insignificant 1.00000000 1.00000 insignificant 8.7070e-01 0.51195628 insignificant 1.000000 1.00000 insignificant -0.01400795 0.087146 insignificant 1 insignificant 0.011414 0.0302875 -0.0189838 39 0.048464 0.0272584 0.0212051 9.9453e-01 1.0725e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9603e-01 5.6397e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0247922 1.3236e-01 insignificant 1.0000e+00 insignificant 0.0112965 0.024575 -0.0160089 35 0.0320994 0.0373366 -0.00523715 1.0000e+00 3.6274e-12 weaklyHypometh 1.0000e+00 1.8137e-09 weaklyHypometh 9.9997e-01 3.5239e-04 weaklyHypometh 1.0000e+00 1.1310e-01 insignificant -0.0166659 0.14348073 insignificant 1.000000 insignificant 0.0130256 0.0302875 -0.016089 39 0.040769 0.0272584 0.0135110 9.6763e-01 5.2026e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8784e-01 9.3480e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0107843 5.0321e-01 insignificant 1.0000e+00 insignificant 0.0127667 0.024575 -0.0182666 35 0.031585 0.0373366 -0.0057518 9.9974e-01 1.7378e-04 weaklyHypometh 1.0000e+00 4.3446e-02 weaklyHypometh 9.9996e-01 8.2699e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00265797 0.8213385 insignificant 1.00000 insignificant 0.0303186 0.024579 0.00013012 35 0.0283710 0.0380986 -0.0097276 0.9997079 9.0217e-01 insignificant 1.00000 1.0000e+00 insignificant 1.0000000 9.8624e-01 insignificant 1 1.0000e+00 insignificant 0.0081263 6.3350e-01 insignificant 1.0000e+00 insignificant chr2 127882190 127883190 8310 MAP3K2 ENSG00000169967 0.176908 1226 39 0.1471116 1055 44 0.1011135 1359 41 0.1257016 1129 34 0.1186410 856 34 0.158748 1461 44 0.1411678 1107 40 0.1404605 1061 42 0.1153880 1432 42 0.1342432 1701 42 0.1324312 1064 43 0.1071094 1506 36 0.1693613 1555 39 0.0914938 599 29 0.1498828 1588 39 0.1307084 1401 34 0.089031 741 34 0.1494961 1237 36 0.0796530 815 39 0.171985 1320 45 0.144034 427 30 0.1348992 820 32 0.1969231 907 39 0.0891383 813 40 0.1331982 593 31 0.1370719 1399 42 0.1322710 940 40 0.1173721 661 38 0.161138 865 39 0.1285915 1395 45 0.156762 1316 41 0.175185 1397 45 0.1932782 1031 43 0.2289633 646 40 0.27823 685 22 0.1468699 462 27 0.2112926 508 40 0.1711022 962 41 0.2026667 1553 39 0.2126400 1068 37 0.1105692 994 33 0.1286479 924 32 0.1728346 1053 36 0.1010308 0.078379 0.0831730 0.1079210 0.073099 0.0986552 0.0808746 0.0942381 0.0744402 0.0954709 0.0914716 0.0806252 0.0933213 0.0772371 0.0963196 0.0843157 0.047904 0.1214130 0.0493261 0.111886 0.087391 0.1216032 0.082975 0.0624869 0.087584 0.0967200 0.0806754 0.0830425 0.101510 0.0859984 0.0812397 0.087679 0.1664205 0.1970102 0.20434459 0.1549424 0.195769 0.1446514 0.162858 0.1688380 0.101593 0.1325248 0.1322351 29 0.0969314 0.1064088 0.00197768 44 0.163172 0.146372 0.01680077 9.5261e-01 0.54001471 insignificant 1.00000000 1.00000 insignificant 8.9971e-01 0.67374167 insignificant 1.000000 1.00000 insignificant -0.01068366 0.305947 insignificant 1 insignificant 0.096935 0.2197623 -0.0863284 41 0.166139 0.1695583 -0.0034192 9.9997e-01 1.3318e-16 weaklyHypometh 1.0000e+00 1.3318e-13 weaklyHypometh 9.9996e-01 4.2717e-05 weaklyHypometh 1.0000e+00 0.0142389 weaklyHypometh -0.0734239 9.6568e-03 weaklyHypometh 3.4489e-01 insignificant 0.0967649 0.131617 -0.0491900 34 0.1371885 0.1692294 -0.03204096 1.0000e+00 3.5745e-20 weaklyHypometh 1.0000e+00 3.5745e-17 weaklyHypometh 1.0000e+00 1.7931e-08 weaklyHypometh 1.0000e+00 1.7931e-05 weaklyHypometh -0.0339399 0.16926648 insignificant 1.000000 insignificant 0.1064457 0.2197623 -0.086704 41 0.149033 0.1695583 -0.0205254 9.9378e-01 4.1431e-09 weaklyHypometh 1.0000e+00 2.0715e-06 weaklyHypometh 9.9853e-01 1.8055e-03 weaklyHypometh 1.0000e+00 4.5138e-01 insignificant -0.0627403 1.8607e-02 weaklyHypometh 5.4727e-01 insignificant 0.1061448 0.131617 -0.0540325 34 0.135789 0.1692294 -0.0334405 9.9996e-01 1.1837e-10 weaklyHypometh 1.0000e+00 5.9187e-08 weaklyHypometh 9.9999e-01 7.5622e-05 weaklyHypometh 1.0000e+00 3.7811e-02 weaklyHypometh -0.02325626 0.3277055 insignificant 1.00000 insignificant 0.2200187 0.131640 0.03123876 34 0.1793406 0.1724838 0.0068567 0.6863009 8.9622e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9857775 9.9449e-01 insignificant 1 1.0000e+00 insignificant 0.0394840 1.8592e-01 insignificant 1.0000e+00 insignificant chr2 128366490 128367490 8325 AMMECR1L ENSG00000144233 0.865208 119 5 0.9247124 202 5 0.8696498 163 5 0.9412698 50 5 0.9383333 84 5 0.948863 154 5 0.8870875 164 5 0.8814106 134 5 0.9047017 137 5 0.9018182 104 5 0.9196947 153 5 0.8501709 104 5 0.9316164 185 5 NA 0 0 0.9130540 146 5 0.7500000 51 5 0.930000 45 5 0.9401709 85 5 0.9594188 146 5 0.870437 157 5 0.958929 69 5 0.7706061 51 5 0.7977941 84 5 0.9166667 110 5 0.9000000 38 5 0.9436526 232 5 0.8799440 76 5 0.9214286 40 5 0.899144 195 5 0.9600614 250 5 0.917703 255 5 0.905626 210 5 0.9246349 161 5 0.8720262 152 5 0.00000 20 1 1.0000000 47 5 0.8442857 60 5 0.8387790 244 5 0.9400932 137 5 0.8703184 145 5 0.8615385 73 5 0.9278788 117 5 0.8514286 73 5 0.8651079 0.924380 0.8675452 0.9429419 0.939604 0.9477846 0.8882705 0.8791816 0.9038284 0.9052663 0.9226697 0.8487511 0.9323238 NA 0.9120526 0.7512136 0.927913 0.9392582 0.9595453 0.871500 0.959128 0.7695352 0.793350 0.9186893 0.894417 0.9438518 0.8762435 0.9187760 0.899155 0.9600204 0.9175431 0.906815 0.9217331 0.8693210 NA 1.0000000 0.843019 0.8400456 0.940039 0.8699536 0.858476 0.9308179 0.8472954 5 0.9030634 0.9130435 -0.01077699 5 0.904104 0.912096 -0.00799241 8.1054e-01 0.20037856 insignificant 1.00000000 1.00000 insignificant 5.0447e-01 0.43907259 insignificant 1.000000 1.00000 insignificant 0.00382405 0.851788 lowCoverage 1 lowCoverage 0.903063 0.8596491 0.0432422 5 0.904104 0.8598151 0.0442888 5.7599e-02 6.8180e-01 insignificant 7.1999e-01 1.0000e+00 insignificant 7.9817e-01 2.1023e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.1548326 3.5390e-01 lowCoverage 1.0000e+00 lowCoverage 0.9030634 0.899083 0.0036355 5 0.9041039 0.8961410 0.00796294 2.5947e-01 3.2279e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.9785e-01 5.0761e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0112021 0.61501919 lowCoverage 1.000000 lowCoverage 0.9130435 0.8596491 0.054235 5 0.912096 0.8598151 0.0522812 7.9265e-02 6.8612e-01 insignificant 9.6664e-01 1.0000e+00 insignificant 5.2935e-01 2.9459e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.1510086 3.6584e-01 lowCoverage 1.0000e+00 lowCoverage 0.9130435 0.899083 0.0140360 5 0.912096 0.8961410 0.0159553 2.3966e-01 6.3978e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.5921e-01 6.9293e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00737804 0.7718915 insignificant 1.00000 insignificant 0.8596491 0.899083 -0.03994340 5 0.8598151 0.8961410 -0.0363259 0.7470334 3.8131e-01 insignificant 1.00000 1.0000e+00 insignificant 0.6673482 7.8680e-01 insignificant 1 1.0000e+00 insignificant -0.1436305 3.8816e-01 lowCoverage 1.0000e+00 lowCoverage chr2 128692990 128693990 8332 UGGT1 ENSG00000136731 0.785121 155 5 0.6140873 102 5 0.6771429 41 5 0.7304144 133 5 0.8597884 69 5 0.700000 73 5 0.6320513 60 5 0.6541375 61 5 0.8500000 14 0 0.7888889 39 5 0.7558994 134 5 0.8555556 28 5 0.7452614 83 5 0.6610195 58 5 0.6769231 45 3 0.6944444 28 3 0.500000 8 0 0.6412541 232 5 0.8500000 24 2 0.859722 80 5 0.833333 6 0 0.8333333 11 0 0.8606061 77 5 0.5619048 22 2 0.7782609 76 3 0.7109557 99 5 0.9027778 19 1 0.7500000 20 0 0.783399 90 5 0.5188713 63 5 0.740952 49 5 0.763568 72 5 0.5497819 124 5 0.5320238 76 5 0.54960 67 5 0.5333333 20 3 0.5649351 61 5 0.7299317 96 5 0.7741381 142 5 0.7607843 106 5 0.7556852 164 5 0.8781362 101 3 0.8072874 116 5 0.7646609 0.743950 0.7163934 0.7553312 0.826958 0.7117486 0.8197982 0.7901811 0.8483607 0.8023679 0.7867555 0.8743169 0.7622281 0.7478808 0.7313997 0.6166619 0.500000 0.7917084 0.8811475 0.753005 0.754098 0.8101897 0.815350 0.8775956 0.765502 0.7461118 0.8961749 0.8565574 0.826217 0.7067395 0.7459797 0.709479 0.5055371 0.5661495 0.69603825 0.5491803 0.619970 0.7644512 0.781461 0.7691659 0.766318 0.8847171 0.8370943 0 0.7525562 0.7692308 -0.02011412 5 0.666521 0.624271 0.04225005 9.8219e-01 0.35072233 insignificant 1.00000000 1.00000 insignificant 9.9901e-01 0.40397964 insignificant 1.000000 1.00000 insignificant -0.02657803 0.509462 lowCoverage 1 lowCoverage 0.752740 0.5801354 0.1603398 5 0.618818 0.6451532 -0.0263351 1.1185e-08 9.9999e-01 weaklyHypermeth 4.6602e-07 1.0000e+00 weaklyHypermeth 1.3608e-04 9.9962e-01 weaklyHypermeth 6.8039e-03 1.0000000 weaklyHypermeth 0.1499841 2.4970e-03 lowCoverage 1.2485e-01 lowCoverage 0.7532557 0.804452 -0.0379385 5 0.7219545 0.8196619 -0.09770733 9.9408e-01 1.0705e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7911e-01 2.0220e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0686207 0.04965116 lowCoverage 1.000000 lowCoverage 0.7693603 0.5788288 0.179554 5 0.650039 0.5645091 0.0855297 1.6067e-06 9.9990e-01 weaklyHypermeth 5.3556e-05 1.0000e+00 weaklyHypermeth 3.7348e-04 9.9999e-01 weaklyHypermeth 1.8674e-02 1.0000e+00 weaklyHypermeth 0.1765621 1.5179e-03 lowCoverage 1.0120e-01 lowCoverage 0.7728814 0.804452 -0.0190798 5 0.783385 0.8196619 -0.0362769 7.5072e-01 2.6490e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.8261e-01 8.3292e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04204266 0.3079715 lowCoverage 1.00000 lowCoverage 0.5791855 0.804452 -0.20108166 5 0.5860121 0.8196619 -0.2336498 0.9999911 6.4548e-07 hypomethylated 1.00000 4.9652e-05 hypomethylated 0.9999991 4.8062e-05 hypomethylated 1 4.8062e-03 hypomethylated -0.2186048 3.4349e-04 lowCoverage 4.2937e-02 lowCoverage chr2 128778790 128779790 8333 UGGT1 ENSG00000136731 0.549268 242 6 0.6921730 152 6 0.4105654 156 6 0.5613248 97 6 0.6417126 113 6 0.787657 218 6 0.6731781 214 6 0.5227412 162 6 0.5591228 168 6 0.7535281 147 6 0.7488053 241 6 0.6630410 167 6 0.4415230 193 6 NA 0 0 0.5595835 180 6 0.6487654 88 6 0.521803 154 6 0.3427848 133 6 0.5259410 105 6 0.578240 269 6 0.785698 148 5 0.3911495 87 6 0.7073887 220 6 0.5927778 102 5 0.6982906 43 6 0.6851003 134 6 0.5995532 133 6 0.5442524 84 4 0.566138 99 6 0.5771881 263 6 0.610363 222 6 0.749723 322 6 0.4650697 207 6 0.0631584 164 6 0.59714 141 3 0.2760989 94 6 0.6719116 87 6 0.2992521 214 6 0.5261917 202 6 0.3816153 168 6 0.4357761 119 6 0.3959590 258 6 0.2183023 200 6 0.6367952 0.771052 0.4955611 0.6031469 0.731066 0.7885594 0.7022674 0.6045969 0.6334974 0.7939005 0.7678346 0.7000072 0.5143160 NA 0.6379952 0.6559554 0.527202 0.3319860 0.6502232 0.642891 0.766844 0.4522799 0.753267 0.6164553 0.819821 0.6958432 0.6596711 0.6577551 0.632197 0.6531673 0.6559673 0.765778 0.4988811 0.0560162 0.60301213 0.2228201 0.597951 0.3537180 0.557292 0.3984031 0.505451 0.4085303 0.2706178 4 0.6261332 0.6731287 -0.04285244 6 0.599648 0.645711 -0.04606371 9.9187e-01 0.06895281 insignificant 1.00000000 1.00000 insignificant 9.5535e-01 0.17698068 insignificant 1.000000 1.00000 insignificant -0.03712157 0.375611 insignificant 1 insignificant 0.626133 0.4046307 0.2375309 6 0.599648 0.3705834 0.2290641 8.2158e-09 9.9996e-01 hypermethylated 3.7344e-07 1.0000e+00 hypermethylated 4.6298e-05 9.8210e-01 hypermethylated 2.5721e-03 1.0000000 hypermethylated 0.1930746 9.2598e-02 insignificant 1.0000e+00 insignificant 0.6261332 0.414995 0.2179815 6 0.5996475 0.3943714 0.20527610 2.5577e-09 9.9997e-01 hypermethylated 8.5256e-07 1.0000e+00 hypermethylated 2.5906e-07 9.9971e-01 hypermethylated 8.6354e-05 1.0000e+00 hypermethylated 0.1969447 0.01172349 weaklyHypermeth 0.706376 insignificant 0.6731287 0.4046307 0.280214 6 0.645711 0.3705834 0.2751278 5.7343e-10 9.9999e-01 hypermethylated 4.7786e-08 1.0000e+00 hypermethylated 1.2810e-05 9.8212e-01 hypermethylated 1.0675e-03 1.0000e+00 hypermethylated 0.2301962 5.4995e-02 insignificant 1.0000e+00 insignificant 0.6731287 0.414995 0.2650391 6 0.645711 0.3943714 0.2513398 4.4211e-13 1.0000e+00 hypermethylated 2.2105e-10 1.0000e+00 hypermethylated 6.7975e-08 9.9996e-01 hypermethylated 3.3987e-05 1.0000e+00 hypermethylated 0.23406631 0.0049981 weaklyHypermeth 0.62477 insignificant 0.4046307 0.414995 -0.01690331 6 0.3705834 0.3943714 -0.0237880 0.6675067 4.2403e-01 insignificant 1.00000 1.0000e+00 insignificant 0.8551638 4.3576e-01 insignificant 1 1.0000e+00 insignificant 0.0038701 9.7157e-01 insignificant 1.0000e+00 insignificant chr2 130801290 130802290 8340 ENSG00000208390 0.504222 441 24 0.3894430 559 22 0.7369165 356 22 0.7713186 367 16 0.5749528 139 12 0.606039 535 21 0.2937835 454 18 0.6570383 229 18 0.7564132 272 18 0.5817464 280 18 0.8371304 329 18 0.4098891 246 16 0.7544509 311 18 0.7576848 120 9 0.7080867 312 18 0.3353790 169 12 0.796514 144 12 0.5771912 376 16 0.3218897 296 18 0.572403 512 24 0.592196 138 14 0.6006671 211 20 0.6922108 325 24 0.6090534 149 12 0.6376376 182 11 0.4261671 589 23 0.3930639 344 18 0.5219203 149 12 0.261371 373 20 0.2758948 798 24 0.497541 521 22 0.364410 587 20 0.7680862 441 22 0.7813076 257 20 0.77491 335 17 0.7774910 142 12 0.5520966 238 17 0.7393841 368 21 0.5362999 512 18 0.6403182 546 24 0.8469454 384 20 0.8822027 432 20 0.6910715 444 16 0.4851531 0.365266 0.7483226 0.7112789 0.548457 0.5461216 0.2285416 0.7022273 0.7437846 0.6693397 0.8318084 0.4642262 0.7276529 0.7175375 0.7386728 0.4077951 0.735151 0.6036446 0.2285463 0.562219 0.657588 0.6327144 0.726921 0.5866580 0.699974 0.4546284 0.2574150 0.5936613 0.242174 0.2432560 0.4395203 0.301439 0.7511051 0.7577278 0.74349968 0.7552878 0.559728 0.7342343 0.557712 0.5849492 0.792466 0.8593031 0.7431658 11 0.5499690 0.3980760 0.14285853 19 0.571179 0.414215 0.15696392 1.0526e-07 0.99992812 weaklyHypermeth 0.00010526 1.00000 weaklyHypermeth 9.5303e-05 0.99999485 weaklyHypermeth 0.095303 1.00000 weaklyHypermeth 0.10778012 0.068041 insignificant 1 insignificant 0.549798 0.7372263 -0.1763368 19 0.534329 0.7479038 -0.2135752 9.8463e-01 4.2850e-09 weaklyHypometh 1.0000e+00 1.4283e-06 weaklyHypometh 9.9534e-01 1.9915e-04 weaklyHypometh 1.0000e+00 0.0497878 weaklyHypometh -0.1350884 2.1083e-02 weaklyHypometh 5.8564e-01 insignificant 0.5497983 0.698447 -0.1327923 18 0.5343286 0.6941345 -0.15980594 1.0000e+00 3.8861e-05 weaklyHypometh 1.0000e+00 1.2954e-02 weaklyHypometh 1.0000e+00 1.8171e-03 weaklyHypometh 1.0000e+00 2.5959e-01 insignificant -0.1222430 0.14698475 insignificant 1.000000 insignificant 0.3980293 0.7367829 -0.330265 22 0.411151 0.7208935 -0.3097424 9.7374e-01 3.8942e-23 hypomethylated 1.0000e+00 3.8942e-20 hypomethylated 9.9806e-01 1.5674e-09 hypomethylated 1.0000e+00 1.5674e-06 hypomethylated -0.2428685 5.3373e-04 hypomethylated 4.4477e-02 hypomethylated 0.3980293 0.697664 -0.2724084 18 0.411151 0.6613632 -0.2502121 1.0000e+00 5.8755e-17 hypomethylated 1.0000e+00 5.8755e-14 hypomethylated 1.0000e+00 6.9668e-09 hypomethylated 1.0000e+00 6.9668e-06 hypomethylated -0.23002308 0.0184102 weaklyHypometh 1.00000 insignificant 0.7372263 0.698447 0.03400561 18 0.7479038 0.6941345 0.0537693 0.1154441 6.5630e-01 insignificant 1.00000 1.0000e+00 insignificant 0.6037557 8.3733e-01 insignificant 1 1.0000e+00 insignificant 0.0128454 8.6784e-01 insignificant 1.0000e+00 insignificant chr2 131952788 131953788 8352 TUBA3D ENSG00000075886 0.732489 321 8 0.8720977 210 8 0.7144473 195 8 0.7808803 358 8 0.6856061 97 8 0.730144 419 8 0.6922971 123 7 0.7987411 201 8 0.6343732 162 8 0.7548191 80 5 0.8469725 258 8 0.5882353 70 4 0.8623826 192 8 0.6893773 45 5 0.8749466 101 8 0.7100840 61 4 0.824632 72 4 0.7551305 302 6 0.7767573 128 8 0.812527 265 8 0.890328 96 4 0.7564765 120 5 0.8420825 181 5 0.7204607 126 8 0.9804688 77 5 0.7993949 277 8 0.7865990 144 8 0.7749053 79 5 0.805056 199 8 0.8279193 310 8 0.768691 261 8 0.839141 334 8 0.7614095 263 8 0.7304688 130 5 0.77778 240 8 0.6031746 32 4 0.7631944 173 8 0.6699874 257 8 0.7041753 389 5 0.8119784 260 8 0.7703822 357 7 0.8434715 358 5 0.7678632 475 8 0.8075162 0.920688 0.8056988 0.8553689 0.838360 0.7938247 0.7680700 0.8300028 0.7946829 0.9061402 0.9047465 0.8748115 0.9194125 0.8538878 0.8977646 0.8361922 0.775128 0.7729593 0.8402860 0.885603 0.864968 0.7553394 0.863650 0.7640195 0.967147 0.9049189 0.7916252 0.8293099 0.819308 0.8762982 0.9103176 0.956631 0.7292323 0.7028245 0.98397436 0.6034496 0.863871 0.6843111 0.827172 0.9462290 0.832918 0.8180690 0.8090756 4 0.8107739 0.8489111 -0.03225762 8 0.768689 0.801938 -0.03324912 9.8696e-01 0.00852220 weaklyHypometh 1.00000000 1.00000 insignificant 9.9086e-01 0.00604802 weaklyHypometh 1.000000 1.00000 insignificant -0.05911327 0.035059 weaklyHypometh 1 insignificant 0.810656 0.7789954 0.0524227 8 0.757353 0.7081004 0.0492525 4.1574e-02 1.4168e-01 weaklyHypermeth 5.4702e-01 1.0000e+00 insignificant 5.5529e-01 6.3935e-02 insignificant 1.0000e+00 1.0000000 insignificant 0.0391783 2.6336e-01 insignificant 1.0000e+00 insignificant 0.8106557 0.785209 0.0040107 8 0.7573529 0.6918395 0.06551336 8.5437e-01 1.6318e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.5244e-01 1.3976e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0227271 0.45934050 insignificant 1.000000 insignificant 0.8489111 0.7795059 0.077109 8 0.801938 0.7341130 0.0678248 3.0814e-02 4.9147e-01 weaklyHypermeth 4.1640e-01 1.0000e+00 insignificant 3.1960e-01 4.1871e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0982915 1.6072e-02 weaklyHypermeth 5.1845e-01 insignificant 0.8489111 0.785637 0.0345054 8 0.801938 0.7783195 0.0236183 1.6684e-01 4.8499e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.0451e-01 6.2237e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03638613 0.2640634 insignificant 1.00000 insignificant 0.7789954 0.785209 -0.05944381 8 0.7081004 0.6918395 0.0162609 0.5302165 2.9238e-01 insignificant 1.00000 1.0000e+00 insignificant 0.6647330 7.2380e-01 insignificant 1 1.0000e+00 insignificant -0.0619054 1.2313e-01 insignificant 1.0000e+00 insignificant chr2 134063988 134064988 8412 NCKAP5 ENSG00000176771 0.850406 175 7 0.5566545 131 7 0.6892361 87 7 0.7566972 135 7 0.8173401 80 4 0.723911 125 7 0.5377592 77 7 0.7576389 139 7 0.7516868 65 7 0.8082353 60 7 0.7589429 224 7 0.8029994 57 4 0.5967817 130 7 0.7822511 106 8 0.7010582 99 7 0.6702948 43 7 0.791667 19 0 0.7039683 148 6 0.9408274 156 2 0.612118 170 7 0.725185 51 2 0.6318681 22 1 0.8990330 86 3 0.8136364 56 4 0.8347858 80 3 0.7805630 188 7 0.7266129 130 4 0.4527778 26 1 0.636733 178 7 0.7290965 173 7 0.673246 103 7 0.625893 143 7 0.8030723 150 7 0.7410628 108 6 0.61232 135 7 0.8333333 6 0 0.3932219 98 4 0.7615699 140 7 0.5664503 130 7 0.7320458 128 6 0.7843277 156 7 0.8285714 84 3 0.6811515 157 6 0.8552590 0.678831 0.6450968 0.8287941 0.913567 0.7703332 0.6999831 0.7657828 0.7573624 0.8274955 0.8154498 0.8373377 0.8449029 0.8570445 0.7165103 0.7113035 0.830808 0.8195346 0.9368408 0.838313 0.810354 0.8004997 0.875744 0.8181818 0.804687 0.8019657 0.7642147 0.6262626 0.757848 0.8314425 0.7698220 0.779708 0.8512779 0.8201911 0.71178287 0.8064337 0.718030 0.7809592 0.734267 0.8391975 0.829072 0.8939394 0.7424170 1 0.8005403 0.8030794 0.01265047 7 0.731951 0.566406 0.16554558 3.2562e-01 0.96046500 insignificant 1.00000000 1.00000 insignificant 3.6586e-01 0.96335158 insignificant 1.000000 1.00000 insignificant 0.01973770 0.634600 lowCoverage 1 lowCoverage 0.799910 0.7802198 0.0308822 7 0.690285 0.4855097 0.2047749 2.4056e-02 9.8212e-01 weaklyHypermeth 3.3411e-01 1.0000e+00 insignificant 2.6599e-01 9.8680e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0397600 5.9421e-01 insignificant 1.0000e+00 insignificant 0.8014473 0.830534 -0.0026965 7 0.7351943 0.7009006 0.03429364 4.5308e-01 7.1336e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.0688e-01 6.1659e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0120143 0.82019194 insignificant 1.000000 insignificant 0.8043831 0.7814465 0.010812 7 0.617897 0.5296469 0.0882502 2.5321e-01 9.4882e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.9201e-01 9.3478e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0200223 7.9734e-01 lowCoverage 1.0000e+00 lowCoverage 0.8070033 0.830534 -0.0071100 7 0.755208 0.7009006 0.0543069 2.5246e-01 4.4521e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.3348e-01 4.5790e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00772341 0.8948601 lowCoverage 1.00000 lowCoverage 0.7863924 0.830534 -0.02676200 7 0.6473462 0.7009006 -0.0535544 0.6623797 2.8767e-01 insignificant 1.00000 1.0000e+00 insignificant 0.7219208 3.5047e-01 insignificant 1 1.0000e+00 insignificant -0.0277457 7.4038e-01 insignificant 1.0000e+00 insignificant chr2 135180488 135181488 8445 MGAT5 ENSG00000152127 0.898157 180 7 0.6960299 170 7 0.8504716 143 7 0.8445901 199 7 0.9857143 45 5 0.892762 285 7 0.6875000 61 5 0.8851136 167 7 0.7250041 136 7 0.9318576 131 4 0.8970846 197 7 0.6407204 51 4 0.5286832 190 7 0.8038533 103 4 0.7606085 133 6 0.9302778 84 4 0.456250 22 2 0.6849651 214 5 0.8453251 149 5 0.930095 147 5 0.865446 68 4 0.5050406 127 6 0.8382651 128 7 0.7486695 96 4 0.6948337 87 4 0.8139010 187 7 0.7534883 161 5 0.8289116 54 4 0.903139 159 6 0.8421335 263 7 0.897721 199 7 0.821147 197 7 0.5349112 205 7 0.5061456 82 4 0.76190 168 7 0.4249251 36 3 0.6132290 171 7 0.6650388 186 7 0.7808101 157 4 0.7530075 146 6 0.7864585 172 6 0.5496484 124 4 0.7756885 183 7 0.8530504 0.760955 0.8657186 0.9185392 0.975403 0.9173371 0.6287442 0.9238009 0.7760658 0.9476787 0.9360988 0.8404199 0.7994884 0.8941905 0.8638129 0.8973277 0.639420 0.6331626 0.8910542 0.887769 0.847732 0.6807294 0.845575 0.9155815 0.714452 0.8632774 0.8231064 0.7769489 0.845044 0.9025960 0.9620250 0.888862 0.5750074 0.6853551 0.74059140 0.4794256 0.654333 0.7423422 0.874761 0.8096926 0.842993 0.6426797 0.8405355 4 0.8396865 0.8366165 -0.00217633 7 0.786860 0.833624 -0.04676383 7.8123e-01 0.62368204 insignificant 1.00000000 1.00000 insignificant 6.7961e-01 0.85595360 insignificant 1.000000 1.00000 insignificant 0.00102851 0.981884 insignificant 1 insignificant 0.840114 0.6757075 0.1531771 7 0.813554 0.6342909 0.1792633 8.2734e-08 1.0000e+00 weaklyHypermeth 2.8529e-06 1.0000e+00 weaklyHypermeth 2.7306e-05 9.9999e-01 weaklyHypermeth 1.6062e-03 1.0000000 weaklyHypermeth 0.2093941 5.4394e-03 weaklyHypermeth 2.1758e-01 insignificant 0.8401142 0.809463 0.0462323 6 0.8135542 0.7525655 0.06098873 9.6074e-03 7.8142e-01 weaklyHypermeth 8.8790e-01 1.0000e+00 insignificant 1.0206e-02 8.0196e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.0646306 0.27463735 insignificant 1.000000 insignificant 0.8365217 0.6757075 0.155953 7 0.809856 0.6342909 0.1755649 6.2492e-07 9.9997e-01 weaklyHypermeth 2.4035e-05 1.0000e+00 weaklyHypermeth 1.7053e-05 9.9998e-01 weaklyHypermeth 1.2180e-03 1.0000e+00 weaklyHypermeth 0.2083656 5.8639e-03 weaklyHypermeth 2.9320e-01 insignificant 0.8365217 0.809463 0.0487204 6 0.809856 0.7525655 0.0572903 1.5173e-02 8.8927e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 5.9528e-02 7.5297e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.06360205 0.2815027 insignificant 1.00000 insignificant 0.6757075 0.809463 -0.11071710 6 0.6342909 0.7525655 -0.1182746 0.8973027 2.1169e-03 weaklyHypometh 1.00000 4.9231e-02 weaklyHypometh 0.9895411 1.9867e-02 weaklyHypometh 1 4.6202e-01 insignificant -0.1447635 5.8670e-02 insignificant 1.0000e+00 insignificant chr2 141804788 141805788 8547 ENSG00000201892 0.966564 116 5 0.7991139 125 8 0.7500000 22 2 0.9472340 149 4 0.9414141 54 5 0.920321 148 5 0.8500000 80 5 0.8823529 84 5 0.9326797 54 5 0.9525641 61 5 0.8275794 212 5 0.7364286 33 5 0.8140750 70 5 0.8138462 38 5 0.8468750 54 5 0.7142857 23 2 0.725142 525 5 0.8261218 57 5 0.9714286 17 2 0.696502 103 5 0.885714 42 5 0.8846154 42 3 0.9050000 35 4 0.9714286 34 4 0.8832027 110 5 0.9630952 99 5 0.8214286 37 5 0.8493304 42 2 0.833333 18 2 0.9346202 188 5 0.919708 200 5 0.574111 161 5 0.8219697 67 5 0.6642308 89 5 0.56837 152 5 0.8000000 121 5 0.8607143 38 5 0.9189855 158 5 0.8250874 224 5 0.8817036 257 5 0.7832743 257 5 0.9333333 36 5 0.9085288 272 5 0.9670242 0.844288 0.7368421 0.9372900 0.922913 0.8857335 0.8078947 0.8699690 0.9114207 0.9375843 0.9114453 0.7077068 0.8813061 0.7971660 0.9407895 0.7293233 0.912634 0.8970985 0.9624060 0.899842 0.849624 0.8562753 0.898684 0.9473684 0.867388 0.9558271 0.9022556 0.9459586 0.912281 0.9230807 0.9063924 0.900631 0.8883573 0.6529352 0.71948472 0.7846890 0.816729 0.8956903 0.904564 0.8487134 0.819359 0.9122807 0.8873001 0 0.8745679 0.9325397 -0.00557226 5 0.807810 0.777073 0.03073661 4.0004e-01 0.39571346 insignificant 1.00000000 1.00000 insignificant 7.4649e-01 0.19947884 insignificant 1.000000 1.00000 insignificant -0.02307257 0.531186 lowCoverage 1 lowCoverage 0.874568 0.8160000 0.1089086 5 0.807810 0.7219146 0.0858953 1.8682e-04 5.9775e-01 weaklyHypermeth 3.8126e-03 1.0000e+00 weaklyHypermeth 1.0621e-01 9.3473e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0733483 2.4353e-01 lowCoverage 1.0000e+00 lowCoverage 0.8745679 0.945507 0.0174292 5 0.8078099 0.8079257 -0.00011583 3.9627e-01 1.4487e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.7128e-01 5.5514e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0206591 0.56007800 lowCoverage 1.000000 lowCoverage 0.9325397 0.8160000 0.114475 5 0.777073 0.7219146 0.0551587 3.4100e-04 9.6148e-01 weaklyHypermeth 7.4130e-03 1.0000e+00 weaklyHypermeth 8.2583e-02 9.7587e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0964209 1.5340e-01 lowCoverage 1.0000e+00 lowCoverage 0.9325397 0.945507 0.0167005 5 0.777073 0.8079257 -0.0308524 1.6304e-01 4.5606e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.4185e-01 7.9291e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00241344 0.9536561 lowCoverage 1.00000 lowCoverage 0.8160000 0.945507 -0.09733504 5 0.7219146 0.8079257 -0.0860112 0.9996019 2.3677e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9946942 7.0485e-01 insignificant 1 1.0000e+00 insignificant -0.0940074 1.5995e-01 insignificant 1.0000e+00 insignificant chr2 143360188 143361188 8579 KYNU ENSG00000115919 0.795739 314 10 0.6358288 145 7 0.5584236 159 9 0.7368132 185 10 0.7298535 92 7 0.719623 277 11 0.7616760 105 9 0.8311271 128 7 0.6492446 93 7 0.7508690 95 9 0.7502591 303 9 0.4888889 51 5 0.8245905 106 7 0.7846154 29 1 0.7005517 117 7 0.7156966 69 9 0.613215 53 5 0.7694126 225 10 0.6134691 123 6 0.600602 224 9 0.785185 46 3 0.7354312 52 3 0.8310363 176 10 0.6666621 77 7 0.5879630 63 7 0.6281457 186 9 0.7103355 69 6 0.5389286 48 3 0.775256 147 7 0.7149017 200 9 0.748864 180 10 0.781707 327 10 0.6300479 123 7 0.7035389 149 9 0.66244 174 9 0.7123810 49 5 0.7703922 82 7 0.6028826 207 9 0.8079415 265 10 0.8318479 323 10 0.8562571 341 10 0.8888551 237 10 0.7601380 314 10 0.7953824 0.710883 0.7111212 0.8341232 0.749935 0.7901599 0.7568955 0.7893540 0.7291615 0.8025957 0.7662273 0.5647709 0.8216342 0.7745310 0.7371963 0.6653878 0.728864 0.8046242 0.6173858 0.770160 0.843597 0.8626310 0.762245 0.7652299 0.731964 0.7761078 0.7979627 0.7063868 0.812743 0.8039169 0.7940866 0.812666 0.6647351 0.6395051 0.69760393 0.7212593 0.756435 0.6683329 0.761148 0.8574635 0.824229 0.8405378 0.7824509 3 0.7697891 0.7893062 -0.02999884 9 0.644715 0.725729 -0.08101344 9.9056e-01 0.05749900 insignificant 1.00000000 1.00000 insignificant 9.6846e-01 0.09090897 insignificant 1.000000 1.00000 insignificant -0.00717648 0.827922 insignificant 1 insignificant 0.770617 0.6760204 0.0824254 9 0.660154 0.6203160 0.0398379 4.3563e-04 9.9894e-01 weaklyHypermeth 8.2194e-03 1.0000e+00 weaklyHypermeth 7.1653e-02 9.9352e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0212452 5.2246e-01 insignificant 1.0000e+00 insignificant 0.7697117 0.876351 -0.0568610 9 0.6733893 0.8278381 -0.15444879 1.0000e+00 3.0440e-04 weaklyHypometh 1.0000e+00 7.6101e-02 weaklyHypometh 9.9997e-01 1.6788e-03 weaklyHypometh 1.0000e+00 2.5959e-01 insignificant -0.1274830 0.00107950 weaklyHypometh 0.172601 insignificant 0.7890376 0.6760204 0.114505 9 0.706138 0.6203160 0.0858217 3.6756e-08 9.9845e-01 weaklyHypermeth 1.9383e-06 1.0000e+00 weaklyHypermeth 7.0768e-04 9.8896e-01 weaklyHypermeth 2.8307e-02 1.0000e+00 weaklyHypermeth 0.0284217 4.3646e-01 insignificant 1.0000e+00 insignificant 0.7891026 0.876351 -0.0262917 9 0.730542 0.8278381 -0.0972965 9.9819e-01 5.5886e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6677e-01 1.9288e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.12030648 0.0031344 weaklyHypometh 0.52240 insignificant 0.6764706 0.876268 -0.13906680 9 0.6403687 0.8134912 -0.1731225 1.0000000 7.8154e-10 weaklyHypometh 1.00000 1.3026e-07 weaklyHypometh 0.9999543 6.9476e-06 weaklyHypometh 1 1.3895e-03 weaklyHypometh -0.1487281 1.4949e-03 weaklyHypometh 1.0789e-01 insignificant chr2 147051388 147052388 8674 ENSG00000214064 0.815519 124 5 0.7098441 96 5 0.7400000 31 1 0.7317460 54 5 0.7797980 53 5 0.732081 134 5 0.6641414 40 5 0.7773227 75 5 0.6179798 40 5 0.9055556 18 1 0.5503749 109 5 0.8571429 22 3 0.8174603 29 3 0.8933333 34 3 0.8005952 39 3 0.9333333 11 0 0.850000 11 1 0.6887755 65 4 0.6607143 41 5 0.654286 89 5 0.904762 13 1 0.6666667 14 1 0.8285714 50 3 0.6390476 47 3 0.9065359 42 2 0.7740359 71 5 0.7673611 31 3 1.0000000 15 1 0.660000 62 5 0.8180206 101 5 0.680556 63 5 0.613243 105 5 0.7528139 75 5 0.6416667 34 5 0.69152 102 5 0.6000000 18 2 0.5577778 53 5 0.7050325 71 5 0.9130824 96 5 0.6519805 78 5 0.8382353 76 5 0.7177579 60 3 0.7333333 67 5 0.8496444 0.811837 0.7888889 0.8866213 0.859067 0.8350168 0.8232323 0.8850911 0.6075517 0.8866843 0.7324886 0.8191919 0.8873772 0.8674368 0.7945011 0.9206349 NA 0.8384354 0.9940476 0.825926 0.852784 0.7552784 0.777778 0.6579743 0.888733 0.8222780 0.8898810 NA 0.817460 0.8418374 0.8743386 0.880752 0.8175977 0.8326720 0.83040936 0.7460317 0.647443 0.8063157 0.912869 0.8044166 0.880019 0.8968726 0.8677249 1 0.7739910 0.7915309 -0.00638605 5 0.632186 0.596308 0.03587844 5.5924e-01 0.49467854 insignificant 1.00000000 1.00000 insignificant 5.9407e-01 0.52478618 insignificant 1.000000 1.00000 insignificant -0.01256645 0.769911 lowCoverage 1 lowCoverage 0.776079 0.6968839 0.0629170 5 0.737551 0.6570940 0.0804566 1.2812e-02 9.9392e-01 weaklyHypermeth 1.8568e-01 1.0000e+00 insignificant 3.8265e-03 9.9788e-01 weaklyHypermeth 1.0629e-01 1.0000000 insignificant 0.1008650 1.9461e-02 lowCoverage 5.7863e-01 lowCoverage 0.7760791 0.822281 -0.0522541 5 0.7375505 0.7622224 -0.02467191 9.7139e-01 1.4668e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.1949e-01 3.2451e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0118777 0.82603617 lowCoverage 1.000000 lowCoverage 0.7937807 0.6968839 0.064712 5 0.640137 0.6570940 -0.0169572 6.6436e-02 9.9844e-01 insignificant 8.2019e-01 1.0000e+00 insignificant 3.4713e-02 9.9402e-01 weaklyHypermeth 5.8836e-01 1.0000e+00 insignificant 0.1134314 2.6553e-02 lowCoverage 6.4904e-01 lowCoverage 0.7937807 0.822281 -0.0481326 5 0.640137 0.7622224 -0.1220856 9.8769e-01 8.6419e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3421e-01 3.3161e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00068871 0.9908728 lowCoverage 1.00000 lowCoverage 0.6968839 0.822281 -0.11446898 5 0.6570940 0.7622224 -0.1051285 0.9993426 2.6650e-03 weaklyHypometh 1.00000 6.0569e-02 weaklyHypometh 0.9998348 3.1426e-03 weaklyHypometh 1 1.3663e-01 insignificant -0.1127427 7.9688e-02 lowCoverage 1.0000e+00 lowCoverage chr2 147610188 147611188 8695 PABPC1P2 ENSG00000198526 0.824447 584 15 0.7065239 147 10 0.8293579 110 10 0.8146187 344 15 0.9071429 88 9 0.822984 460 15 0.8377442 97 11 0.8104108 118 8 0.6725556 98 7 0.8913625 94 10 0.8632792 262 15 0.6657509 42 3 0.7948103 110 8 NA 0 0 0.8028086 103 8 0.4489583 59 6 0.564153 68 6 0.8744205 391 15 0.7960966 213 15 0.801845 358 14 0.671008 56 5 0.7776359 180 10 0.7801537 213 16 0.7390110 75 8 0.7957265 97 11 0.8598426 219 13 0.8040852 201 10 0.7439394 52 3 0.806926 108 11 0.8435770 250 14 0.820043 216 13 0.821266 451 15 0.7026949 149 10 0.8767931 123 10 0.74005 248 15 0.6845238 63 4 0.8389836 99 10 0.7971972 278 15 0.8609571 383 15 0.8094233 420 15 0.8320595 377 15 0.8698518 318 15 0.8394216 440 15 0.8646493 0.766672 0.8917031 0.8771135 0.959239 0.8806699 0.8916753 0.8255532 0.8229620 0.8471452 0.8701169 0.6637584 0.8708443 NA 0.8505694 0.6076087 0.726773 0.8753982 0.8146166 0.838460 0.869953 0.8352610 0.884963 0.8637734 0.818901 0.9158665 0.8500449 0.9167490 0.931600 0.8728316 0.9029413 0.838221 0.7972972 0.8489787 0.81785636 0.7729182 0.856898 0.9001190 0.922282 0.9096795 0.880817 0.9142931 0.8719849 2 0.8382274 0.8101983 -0.00034654 14 0.809802 0.718384 0.09141809 2.0020e-01 0.33640157 insignificant 1.00000000 1.00000 insignificant 8.9466e-01 0.00514865 weaklyHypometh 1.000000 1.00000 insignificant -0.01337641 0.664990 insignificant 1 insignificant 0.838227 0.8197917 0.0209786 14 0.809802 0.8075185 0.0022839 1.4697e-01 9.6656e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.1568e-01 8.0874e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0018517 9.6483e-01 insignificant 1.0000e+00 insignificant 0.8382785 0.882869 -0.0311608 14 0.8172776 0.8295207 -0.01224310 9.3488e-01 6.7619e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9862e-01 1.3787e-02 weaklyHypometh 1.0000e+00 9.6093e-01 insignificant -0.0671179 0.02922504 weaklyHypometh 1.000000 insignificant 0.8101983 0.8197917 0.022784 14 0.718384 0.8075185 -0.0891342 1.0535e-01 9.2784e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.0335e-01 9.8849e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0152281 6.7381e-01 insignificant 1.0000e+00 insignificant 0.8109641 0.882869 -0.0338353 14 0.808182 0.8295207 -0.0213385 8.8781e-01 2.1682e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 3.9361e-01 1.5704e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.05374147 0.0106197 weaklyHypometh 1.00000 insignificant 0.8194154 0.882869 -0.05195695 14 0.7834583 0.8295207 -0.0460624 0.9954995 3.1720e-03 weaklyHypometh 1.00000 6.8956e-02 weaklyHypometh 0.9978566 2.8039e-02 weaklyHypometh 1 5.3981e-01 insignificant -0.0689696 8.1867e-02 insignificant 1.0000e+00 insignificant chr2 149659288 149660288 8720 LYPD6B ENSG00000150556 0.726674 265 8 0.5774702 226 7 0.4429691 103 7 0.6581281 151 7 0.5157699 70 5 0.623819 575 8 0.5139933 111 6 0.5639868 163 7 0.5789606 122 7 0.6003057 97 5 0.6476389 250 8 0.6043956 68 4 0.7084484 152 7 0.5500000 26 3 0.5049860 121 6 0.5502355 46 6 0.785400 60 4 0.6613783 186 7 0.6726258 170 7 0.643454 399 7 0.546176 85 5 0.4974359 71 5 0.5897571 151 7 0.6170194 93 6 0.4921621 43 2 0.6877176 213 7 0.6909297 63 5 0.7506541 69 5 0.686508 171 7 0.6851337 283 7 0.671965 249 7 0.627184 430 7 0.5605914 146 7 0.3292526 84 5 0.47245 243 7 0.5891156 73 6 0.5519695 148 7 0.5495273 283 7 0.6657232 191 7 0.7196848 231 7 0.6684713 147 7 0.7126948 213 6 0.7497067 176 7 0.7430059 0.670963 0.5283137 0.6860329 0.638847 0.6619577 0.6778538 0.6841869 0.6484981 0.6744259 0.6607660 0.6436791 0.7413422 0.6389907 0.6610999 0.6618327 0.740668 0.6817785 0.6402202 0.705284 0.736246 0.6546343 0.671113 0.6134368 0.568595 0.6986768 0.6639344 0.7744551 0.693501 0.6759833 0.6813010 0.693028 0.6245863 0.4301171 0.48474758 0.6244340 0.671299 0.6582759 0.754780 0.7018377 0.724995 0.7455836 0.7589958 4 0.6608152 0.6772514 -0.01454451 7 0.563771 0.637108 -0.07333684 8.9768e-01 0.18323791 insignificant 1.00000000 1.00000 insignificant 7.3788e-01 0.47600661 insignificant 1.000000 1.00000 insignificant -0.02202162 0.475017 insignificant 1 insignificant 0.661406 0.5547595 0.0861326 7 0.634242 0.5208010 0.1134412 1.2275e-04 1.0000e+00 weaklyHypermeth 2.8546e-03 1.0000e+00 weaklyHypermeth 5.5496e-04 9.9998e-01 weaklyHypermeth 2.2198e-02 1.0000000 weaklyHypermeth 0.0977143 5.7320e-02 insignificant 1.0000e+00 insignificant 0.6608152 0.757829 -0.0574326 7 0.5637709 0.7284809 -0.16471002 9.9363e-01 3.0655e-03 weaklyHypometh 1.0000e+00 3.8319e-01 insignificant 9.9643e-01 1.4534e-03 weaklyHypometh 1.0000e+00 2.5959e-01 insignificant -0.0967242 0.00120820 weaklyHypometh 0.172601 insignificant 0.6774362 0.5547595 0.099440 7 0.654246 0.5208010 0.1334452 1.2298e-04 1.0000e+00 weaklyHypermeth 2.9280e-03 1.0000e+00 weaklyHypermeth 2.0704e-03 9.9998e-01 weaklyHypermeth 6.6787e-02 1.0000e+00 weaklyHypermeth 0.1197359 2.8839e-02 weaklyHypermeth 6.7067e-01 insignificant 0.6772514 0.757829 -0.0474461 7 0.637108 0.7284809 -0.0913732 9.5991e-01 3.9268e-03 weaklyHypometh 1.0000e+00 6.5447e-01 insignificant 9.9429e-01 8.6857e-03 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.07470260 0.0201713 weaklyHypometh 1.00000 insignificant 0.5547595 0.757576 -0.13170154 7 0.5208010 0.6945410 -0.1737400 0.9999992 2.1761e-04 weaklyHypometh 1.00000 7.2537e-03 weaklyHypometh 1.0000000 2.1980e-05 weaklyHypometh 1 2.6811e-03 weaklyHypometh -0.1944385 2.9625e-03 weaklyHypometh 1.4813e-01 insignificant chr2 154041088 154042088 8831 ENSG00000200377 0.011849 182 6 0.0769231 321 9 0.0000000 287 6 0.0030303 140 6 0.0000000 173 11 0.191381 299 7 0.0013495 283 11 0.0022624 316 6 0.0023641 230 6 0.0000000 241 6 0.0833333 301 10 0.0000000 195 6 0.0069444 171 6 0.1557143 132 6 0.0071497 354 6 0.0000000 99 6 0.000000 11 0 0.0045045 182 6 0.1342988 218 6 0.013276 276 6 0.016667 110 6 0.0954545 98 6 0.0000000 99 6 0.0769231 235 9 0.0510101 101 9 0.0021368 276 9 0.0641026 219 6 0.0666667 139 6 0.000000 166 6 0.0045923 394 9 0.000000 283 9 0.000000 273 6 0.0055957 219 9 0.0464646 95 9 0.10837 282 6 0.0000000 62 7 0.1146480 257 10 0.0050505 193 9 0.0095892 240 9 0.0075758 129 6 0.0000000 145 6 0.0069444 109 6 0.0085859 158 9 0.0122792 0.000000 0.0000000 0.0051913 0.000000 0.0172072 0.0036430 0.0061074 0.0044181 0.0000000 0.0000000 0.0000000 0.0068306 0.0165027 0.0099749 0.0000000 0.000000 0.0042091 0.0128832 0.015064 0.000000 0.0076503 0.000000 0.0000000 0.027383 0.0043260 0.0000000 0.0000000 0.000000 0.0088048 0.0000000 0.000000 0.0114154 0.0173042 0.11607311 0.0000000 0.013709 0.0091075 0.016720 0.0136612 0.000000 0.0064891 0.0159684 6 0.0070279 0.0067002 0.00134724 6 0.107190 0.047088 0.06010262 9.3759e-01 0.99912945 insignificant 1.00000000 1.00000 insignificant 9.2601e-01 0.99983060 insignificant 1.000000 1.00000 insignificant 0.00325635 0.849628 insignificant 1 insignificant 0.006812 0.0298103 -0.0227450 6 0.063249 0.0440393 0.0192097 9.6322e-01 3.7277e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.5663e-01 7.4333e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0119698 6.4883e-01 insignificant 1.0000e+00 insignificant 0.0061406 0.010243 -0.0038870 6 0.0065669 0.0062245 0.00034238 9.6315e-01 1.8044e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.5594e-01 6.2379e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0281800 0.05007271 insignificant 1.000000 insignificant 0.0067142 0.0306859 -0.022880 7 0.057178 0.1123222 -0.0551442 9.8634e-01 2.6534e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9033e-01 5.2106e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0152262 5.4552e-01 insignificant 1.0000e+00 insignificant 0.0058898 0.010243 -0.0050696 6 0.012166 0.0062245 0.0059414 9.9975e-01 3.0476e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9902e-01 6.8288e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02492366 0.0382077 weaklyHypermeth 1.00000 insignificant 0.0290381 0.010243 0.01402944 6 0.0293191 0.0062245 0.0230946 0.8137007 9.5816e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9516480 9.8496e-01 insignificant 1 1.0000e+00 insignificant 0.0401498 1.2265e-01 insignificant 1.0000e+00 insignificant chr2 159517689 159518689 8889 ENSG00000222300 0.704304 129 6 0.7320075 109 6 0.8047619 33 5 0.7548475 121 6 0.5627355 132 6 0.794303 75 6 0.7585200 129 4 0.7743071 89 6 0.7468864 53 4 0.7111111 49 6 0.7565560 172 6 0.4261905 55 4 0.6156275 110 4 0.7633632 98 4 0.6782662 85 5 0.5603535 74 3 0.230769 13 1 0.7078947 105 6 0.8452381 43 4 0.843831 61 5 0.875000 23 3 1.0000000 6 0 0.7132184 110 6 0.9038462 44 3 0.8728331 61 3 0.8222373 84 5 0.7539683 24 3 0.5833333 11 0 0.825000 102 6 0.7448681 91 5 0.779094 114 6 0.887348 91 5 0.7092571 201 6 0.7216255 62 3 0.50294 84 7 1.0000000 4 0 0.6573391 88 5 0.8529078 99 5 0.8189866 125 6 0.7854308 106 6 0.8175023 128 6 0.6937500 36 4 0.7199106 121 6 0.7778129 0.810270 0.7654008 0.8562877 0.536878 0.8516505 0.5711051 0.8172516 0.6807530 0.7932489 0.7559542 0.3625678 0.5322461 0.6513204 0.5708258 0.4579785 NA 0.7526501 0.9008439 0.818182 0.931365 0.9946560 0.678350 0.9071730 0.913651 0.8374839 0.6003617 0.6149092 0.814922 0.7995992 0.8219167 0.871523 0.6105715 0.8636940 0.59132800 0.8981640 0.554476 0.9410051 0.825783 0.8630199 0.852308 0.8003165 0.8102962 2 0.7227666 0.8134034 -0.08647448 5 0.712313 0.828183 -0.11587080 9.9988e-01 0.00268798 weaklyHypometh 1.00000000 0.89599 insignificant 9.9987e-01 0.00809295 weaklyHypometh 1.000000 1.00000 insignificant -0.12480182 0.010614 lowCoverage 1 lowCoverage 0.722864 0.7118959 0.0203057 6 0.718834 0.6552206 0.0636129 1.0591e-01 8.4484e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.7590e-01 6.4299e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0520850 5.1934e-01 lowCoverage 1.0000e+00 lowCoverage 0.7228637 0.837209 -0.1146694 6 0.7188336 0.8070514 -0.08821785 9.9771e-01 2.5842e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.5132e-01 1.3896e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0785223 0.07839506 lowCoverage 1.000000 lowCoverage 0.8129117 0.7118959 0.110664 5 0.803638 0.6552206 0.1484176 4.0867e-04 9.9968e-01 weaklyHypermeth 8.5140e-03 1.0000e+00 weaklyHypermeth 2.5098e-02 9.9778e-01 weaklyHypermeth 4.4818e-01 1.0000e+00 insignificant 0.0727168 3.7087e-01 lowCoverage 1.0000e+00 lowCoverage 0.8129117 0.837209 -0.0216458 5 0.803638 0.8070514 -0.0034131 8.5587e-01 6.9282e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.4737e-01 9.3684e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.04627950 0.2715171 lowCoverage 1.00000 lowCoverage 0.7118959 0.837209 -0.13482708 6 0.6552206 0.8070514 -0.1518308 0.9983261 5.7393e-03 weaklyHypometh 1.00000 1.0919e-01 insignificant 0.9617376 2.4046e-01 insignificant 1 1.0000e+00 insignificant -0.0264373 7.3265e-01 lowCoverage 1.0000e+00 lowCoverage chr2 159711289 159712289 8904 ENSG00000202029 0.479532 119 3 0.6702068 150 6 0.6132530 73 6 0.4845226 129 3 0.6560701 61 7 0.666145 112 7 0.6165042 100 7 0.6750182 116 6 0.6220779 57 4 0.7066933 62 6 0.7306226 166 6 0.3798942 40 3 0.7158957 81 6 0.7131725 83 7 0.7716641 72 6 0.5000000 28 2 0.849348 505 2 0.4657692 130 3 0.6895899 71 6 0.647559 90 6 0.712245 27 2 0.6666667 4 0 0.6569318 59 4 0.6125700 57 6 0.5959064 45 3 0.7226551 140 6 0.7040816 34 2 0.6309524 34 2 0.685653 120 6 0.7671001 110 6 0.633067 76 3 0.673946 108 7 0.6237267 109 4 0.5122313 68 6 0.64139 99 6 0.6666667 4 0 0.6120370 52 5 0.7845238 95 6 0.6766664 128 3 0.6003720 132 3 0.7273154 119 3 0.4725000 72 3 0.6392361 102 4 0.7098752 0.696658 0.7336398 0.7498716 0.761026 0.6603975 0.6650064 0.6412429 0.7388290 0.7636008 0.7397375 0.5520581 0.8114770 0.7399736 0.7254424 0.8813559 0.796996 0.6628162 0.8059170 0.794699 0.721308 0.8305085 0.691649 0.6433200 0.620993 0.7950865 0.6519370 0.6727199 0.813675 0.7643034 0.7736790 0.640915 0.6887686 0.5914768 0.72542373 0.6949153 0.660546 0.8460452 0.761814 0.7348769 0.724409 0.7630508 0.7265301 2 0.7317836 0.7113022 0.00424800 5 0.680323 0.686247 -0.00592394 6.8958e-01 0.67737876 insignificant 1.00000000 1.00000 insignificant 7.1780e-01 0.53644839 insignificant 1.000000 1.00000 insignificant -0.03913773 0.199469 lowCoverage 1 lowCoverage 0.731784 0.6814988 0.0373890 6 0.680323 0.6306254 0.0496980 1.5437e-01 9.6690e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.7603e-01 8.7841e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0074194 8.7063e-01 lowCoverage 1.0000e+00 lowCoverage 0.7324176 0.717902 0.0039253 3 0.6447357 0.6539754 -0.00923976 5.0706e-01 2.7733e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 4.8469e-01 2.7297e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0094589 0.85626074 lowCoverage 1.000000 lowCoverage 0.7113022 0.6814988 0.030862 5 0.686247 0.6306254 0.0556219 1.3549e-01 9.5992e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.6435e-01 8.7414e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0317184 4.4198e-01 lowCoverage 1.0000e+00 lowCoverage 0.6992126 0.717902 -0.0116944 3 0.641297 0.6539754 -0.0126781 6.3691e-01 4.2651e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.3486e-01 3.5012e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.04859661 0.3346362 lowCoverage 1.00000 lowCoverage 0.6855346 0.717902 -0.02992734 3 0.6045134 0.6539754 -0.0494621 0.6744164 2.9405e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.5333493 6.5512e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.0168783 7.7131e-01 lowCoverage 1.0000e+00 lowCoverage chr2 159830689 159831689 8906 ENSG00000202029 0.783667 195 6 0.6740022 106 6 0.5831391 94 6 0.8114734 103 6 0.8310185 54 6 0.739342 163 6 0.8188034 87 6 0.7421008 94 6 0.6435185 56 6 0.8860368 82 6 0.7570906 135 6 0.7452991 67 6 0.7454764 102 6 NA 0 0 0.7844877 95 6 0.9103535 66 6 0.634106 79 6 0.7514355 132 6 0.7562122 144 6 0.731858 183 6 0.702778 20 1 0.7017797 71 6 0.7759844 126 6 0.9095238 44 3 0.7500000 39 6 0.7473617 129 6 0.8357143 30 3 0.7361111 29 3 0.756536 59 3 0.7737822 115 6 0.760776 111 6 0.737205 175 6 0.6237262 94 6 0.6541083 91 6 0.52210 88 4 0.7222222 80 6 0.7962963 43 4 0.6927822 123 6 0.7840162 216 6 0.8135020 162 6 0.8282828 126 6 0.7843561 155 6 0.8645498 150 6 0.8253943 0.732003 0.5847187 0.8323570 0.855622 0.7924707 0.7979733 0.8111742 0.6884897 0.9249843 0.7505555 0.8152004 0.8193088 NA 0.8222970 0.8977500 0.599253 0.7755848 0.8217390 0.734199 0.797405 0.7707788 0.854280 0.8589315 0.811976 0.8165645 0.7519247 0.7974052 0.826230 0.7970818 0.7762647 0.784122 0.6736456 0.6709774 0.63271235 0.7202737 0.821025 0.7485664 0.803934 0.8133337 0.873526 0.8047362 0.9092358 3 0.7648503 0.7848101 -0.01307675 6 0.757205 0.758134 -0.00092904 5.3018e-01 0.40117886 insignificant 1.00000000 1.00000 insignificant 7.4829e-01 0.46380234 insignificant 1.000000 1.00000 insignificant -0.01144931 0.650669 lowCoverage 1 lowCoverage 0.764850 0.6936416 0.0775930 6 0.757205 0.6753719 0.0818332 3.4665e-04 9.9146e-01 weaklyHypermeth 6.7010e-03 1.0000e+00 weaklyHypermeth 2.1251e-03 9.9757e-01 weaklyHypermeth 6.9394e-02 1.0000000 weaklyHypermeth 0.0856410 8.0118e-02 insignificant 1.0000e+00 insignificant 0.7648503 0.814586 -0.0555002 6 0.7572051 0.8133069 -0.05610171 9.9571e-01 1.8725e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.8794e-01 1.8813e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0607614 0.02176033 weaklyHypometh 0.882365 insignificant 0.7848101 0.6936416 0.091520 6 0.758134 0.6753719 0.0827623 3.6383e-04 9.9846e-01 weaklyHypermeth 7.7411e-03 1.0000e+00 weaklyHypermeth 6.0821e-03 9.9893e-01 weaklyHypermeth 1.6438e-01 1.0000e+00 insignificant 0.0970903 5.2110e-02 lowCoverage 1.0000e+00 lowCoverage 0.7848101 0.814586 -0.0410979 6 0.758134 0.8133069 -0.0551727 9.7224e-01 1.9212e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.6059e-01 7.2582e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04931205 0.0465763 lowCoverage 1.00000 lowCoverage 0.6936416 0.814586 -0.13239782 6 0.6753719 0.8133069 -0.1379349 0.9999996 1.1646e-05 weaklyHypometh 1.00000 5.4592e-04 weaklyHypometh 0.9999999 1.2624e-04 weaklyHypometh 1 9.7110e-03 weaklyHypometh -0.1464024 1.0236e-02 weaklyHypometh 3.9369e-01 insignificant chr2 159848589 159849589 8909 ENSG00000202029 0.666832 251 5 0.6079947 141 5 0.4641648 96 5 0.6668402 220 5 0.6732468 71 5 0.671585 310 5 0.6888889 38 4 0.6603794 134 5 0.6545209 143 4 0.6937841 110 5 0.7226099 292 5 0.6671795 54 4 0.7171501 152 5 0.5377778 69 5 0.7417949 101 4 0.2285714 23 1 0.607143 25 3 0.6580107 199 5 0.6907792 81 4 0.703653 184 5 0.720000 22 2 0.6865734 58 5 0.7017316 138 5 0.5011765 50 5 0.6555556 34 3 0.6749224 139 4 0.4076190 54 4 0.5071429 31 3 0.662780 71 4 0.6737247 133 5 0.631584 112 4 0.651260 235 4 0.5220561 143 5 0.6496078 57 4 0.49586 107 4 0.6500000 17 0 0.6147949 124 5 0.5281167 111 4 0.7003367 195 5 0.7087838 201 5 0.6684072 201 5 0.9667596 178 4 0.7079936 259 5 0.7424688 0.712698 0.5137490 0.7608856 0.775805 0.7799142 0.7889750 0.7519450 0.7005252 0.7770481 0.8102577 0.7783343 0.8039118 0.6413437 0.7501888 0.2862680 0.603544 0.7418937 0.8006645 0.781732 0.804651 0.7672250 0.803913 0.5647819 0.679587 0.7179724 0.5224806 0.6500554 0.759402 0.7715241 0.7431793 0.700918 0.6320934 0.7666819 0.50214698 0.7306202 0.698937 0.5849732 0.797918 0.8113976 0.766441 0.9637943 0.8091164 3 0.7442465 0.7223770 0.03983817 4 0.659079 0.629460 0.02961951 7.5827e-03 0.37126448 lowCoverage 1.00000000 1.00000 lowCoverage 8.3505e-02 0.03894611 lowCoverage 1.000000 1.00000 lowCoverage 0.01330611 0.729162 lowCoverage 1 lowCoverage 0.744246 0.6601073 0.0967089 5 0.659079 0.5732330 0.0858460 1.4849e-03 9.9973e-01 weaklyHypermeth 2.6051e-02 1.0000e+00 weaklyHypermeth 2.8625e-02 9.9447e-01 weaklyHypermeth 4.9354e-01 1.0000000 insignificant 0.0594064 1.4277e-01 lowCoverage 1.0000e+00 lowCoverage 0.7442465 0.834623 -0.0820284 5 0.6590790 0.7129541 -0.05387508 8.7364e-01 6.6552e-03 weaklyHypometh 1.0000e+00 6.0502e-01 insignificant 9.5203e-01 4.5240e-04 weaklyHypometh 1.0000e+00 1.1310e-01 insignificant -0.1143109 0.10772308 lowCoverage 1.000000 lowCoverage 0.7223770 0.6601073 0.053358 4 0.629460 0.5732330 0.0562265 1.4382e-03 8.8613e-01 lowCoverage 2.5232e-02 1.0000e+00 lowCoverage 1.3830e-02 6.5329e-01 lowCoverage 2.9424e-01 1.0000e+00 lowCoverage 0.0461003 2.6631e-01 lowCoverage 1.0000e+00 lowCoverage 0.7223770 0.834623 -0.1187776 4 0.629460 0.7129541 -0.0834946 8.9844e-01 6.5940e-04 lowCoverage 1.0000e+00 1.3188e-01 lowCoverage 9.8534e-01 5.7980e-03 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.12761700 0.0809546 lowCoverage 1.00000 lowCoverage 0.6601073 0.834623 -0.18256040 5 0.5732330 0.7129541 -0.1397211 0.9815203 6.7862e-06 weaklyHypometh 1.00000 3.7701e-04 weaklyHypometh 0.9963537 4.6972e-04 weaklyHypometh 1 2.7631e-02 weaklyHypometh -0.1737173 2.9654e-02 lowCoverage 6.7394e-01 lowCoverage chr2 160834289 160835289 8936 ITGB6 ENSG00000115221 0.018767 277 13 0.0048077 373 13 0.0099871 461 13 0.0011655 239 8 0.0242261 386 13 0.077307 497 13 0.0090922 546 13 0.0349676 465 13 0.0277753 567 13 0.0150346 538 13 0.0582138 560 13 0.0081762 675 13 0.0087705 546 13 0.1576355 224 5 0.0088116 729 13 0.0157922 664 13 0.011557 290 13 0.0060355 308 5 0.0017094 404 13 0.005742 342 13 0.083807 217 13 0.0060626 179 5 0.0060206 261 9 0.0094017 204 12 0.0069444 99 5 0.1298363 533 13 0.0039749 397 13 0.0022321 254 12 0.043903 373 13 0.0052432 681 13 0.021817 531 13 0.016132 354 13 0.0076486 412 13 0.0076567 350 13 0.00000 268 10 0.0000000 104 12 0.0052588 209 8 0.0080128 415 13 0.0982776 476 13 0.0808375 345 12 0.0020243 227 5 0.0071225 196 5 0.0016026 278 8 0.0264071 0.006649 0.0125399 0.0027632 0.037763 0.0045612 0.0024669 0.0398298 0.0199822 0.0223439 0.0316993 0.0079927 0.0133839 0.0206704 0.0086512 0.0120619 0.018335 0.0164718 0.0040527 0.012463 0.026610 0.0100273 0.015147 0.0236744 0.015334 0.1666734 0.0115646 0.0043693 0.028236 0.0097807 0.0393249 0.017073 0.0070807 0.0015127 0.00093212 0.0000000 0.014306 0.0189970 0.040689 0.0079569 0.006279 0.0168862 0.0049709 5 0.0149615 0.0315944 -0.01619764 13 0.038373 0.040711 -0.00233745 9.9998e-01 0.00017371 weaklyHypometh 1.00000000 0.17371 insignificant 9.9810e-01 0.19305477 insignificant 1.000000 1.00000 insignificant -0.00266922 0.851710 insignificant 1 insignificant 0.014978 0.0073948 0.0077451 13 0.095253 0.0056239 0.0896291 5.7318e-02 9.8387e-01 insignificant 7.1999e-01 1.0000e+00 insignificant 5.4067e-02 9.9970e-01 insignificant 8.7205e-01 1.0000000 insignificant 0.0205158 2.2906e-02 weaklyHypermeth 6.0280e-01 insignificant 0.0148728 0.020368 -0.0030444 12 0.0793810 0.1452722 -0.06589123 1.7681e-01 4.4980e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 2.2635e-01 8.1459e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0126942 0.60033363 insignificant 1.000000 insignificant 0.0317109 0.0073990 0.023092 13 0.048853 0.0059989 0.0428538 2.5392e-03 1.0000e+00 weaklyHypermeth 4.2321e-02 1.0000e+00 weaklyHypermeth 1.0735e-02 1.0000e+00 weaklyHypermeth 2.4399e-01 1.0000e+00 insignificant 0.0231851 6.9975e-02 insignificant 1.0000e+00 insignificant 0.0317421 0.019724 0.0143319 12 0.052342 0.0842203 -0.0318782 9.9216e-03 9.8513e-01 weaklyHypermeth 7.6320e-01 1.0000e+00 insignificant 8.1599e-02 9.9573e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01002502 0.6916745 insignificant 1.00000 insignificant 0.0073990 0.020368 -0.01015187 12 0.0059989 0.1452722 -0.1392734 0.9441109 4.6246e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9948646 7.5391e-01 insignificant 1 1.0000e+00 insignificant -0.0332101 1.9353e-01 insignificant 1.0000e+00 insignificant chr2 162546589 162547589 8977 SLC4A10 ENSG00000144290 0.949191 405 6 0.8648071 152 6 0.8827932 121 6 0.9672749 114 6 0.9166667 56 6 0.958082 232 6 0.9311378 134 6 0.9182603 142 6 0.9536560 121 6 0.9656958 149 6 0.9201816 150 6 0.9530444 104 6 0.9787506 152 6 NA 0 0 0.9903199 134 6 0.9153846 46 6 0.886364 46 6 0.9199329 160 6 0.9014628 104 6 0.964446 243 6 1.000000 68 4 0.9220238 78 6 0.9302932 198 6 1.0000000 6 0 0.9537037 41 6 0.9587362 169 6 0.8427579 72 6 0.9761905 54 6 0.925468 113 6 0.9456589 190 6 0.956281 158 6 0.902226 243 6 0.9460784 130 6 0.9229243 103 6 1.00000 55 2 0.7549081 73 6 0.7964646 59 6 0.9232937 175 6 0.9757687 369 6 0.9552118 346 6 0.9337999 237 6 0.9497387 280 6 0.9376367 256 6 0.9526513 0.867787 0.8845855 0.9660729 0.924870 0.9605556 0.9275863 0.9151220 0.9529240 0.9651772 0.9182238 0.9507211 0.9791791 NA 0.9884466 0.9075329 0.873293 0.9231491 0.9052548 0.965281 1.000000 0.9201517 0.932479 0.9885733 0.950489 0.9590772 0.8464409 0.9807550 0.927228 0.9464657 0.9579124 0.899204 0.9492533 0.9257720 0.91230630 0.7613529 0.795551 0.9242660 0.975310 0.9517972 0.933398 0.9506936 0.9374086 6 0.9392405 0.9359712 0.00218346 6 0.938405 0.936092 0.00231299 5.9119e-01 0.81354613 insignificant 1.00000000 1.00000 insignificant 9.6536e-01 0.19330279 insignificant 1.000000 1.00000 insignificant -0.00922828 0.541900 insignificant 1 insignificant 0.939241 0.9075630 0.0335301 6 0.938405 0.8956621 0.0427433 1.5899e-04 9.8160e-01 weaklyHypermeth 3.3827e-03 1.0000e+00 weaklyHypermeth 1.2121e-02 9.2792e-01 weaklyHypermeth 2.8189e-01 1.0000000 insignificant 0.0429386 3.2066e-01 insignificant 1.0000e+00 insignificant 0.9392405 0.953629 -0.0136999 6 0.9384054 0.9537942 -0.01538882 9.5667e-01 1.5308e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.8678e-01 5.7158e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0168811 0.14359855 insignificant 1.000000 insignificant 0.9359712 0.9075630 0.034993 6 0.936092 0.8956621 0.0404303 6.3164e-04 9.4312e-01 weaklyHypermeth 1.2147e-02 1.0000e+00 weaklyHypermeth 1.0086e-02 9.8690e-01 weaklyHypermeth 2.3455e-01 1.0000e+00 insignificant 0.0521668 2.4428e-01 insignificant 1.0000e+00 insignificant 0.9359712 0.953629 -0.0172952 6 0.936092 0.9537942 -0.0177018 9.4870e-01 1.0928e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.0343e-01 8.5889e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00765282 0.6073456 insignificant 1.00000 insignificant 0.9075630 0.953629 -0.04542295 6 0.8956621 0.9537942 -0.0581321 0.9915641 9.6446e-04 weaklyHypometh 1.00000 2.4730e-02 weaklyHypometh 0.9433344 4.5382e-02 weaklyHypometh 1 7.4396e-01 insignificant -0.0598196 1.8352e-01 insignificant 1.0000e+00 insignificant chr2 165443789 165444789 8995 ENSG00000199508 0.794160 98 5 0.5722222 76 5 0.6464103 48 5 0.7146728 90 5 0.3950000 30 2 0.754896 188 5 0.5641958 46 5 0.5723291 97 5 0.6035714 52 5 0.4666667 52 5 0.7854392 200 5 0.7071429 26 3 0.8177778 66 5 0.7274725 46 5 0.6259463 52 5 0.5000000 11 0 0.600000 13 0 0.8063602 83 5 0.8094853 93 5 0.750027 159 5 0.621429 16 1 0.7142857 42 5 0.7415751 65 5 0.6928571 50 5 0.7784188 50 5 0.8056452 107 5 0.7946609 96 5 0.8464286 21 2 0.779568 88 5 0.6522153 111 5 0.695187 107 5 0.693759 186 5 0.6386967 102 5 0.5757576 50 5 0.68669 115 5 0.2000000 5 0 0.6505195 61 5 0.4873447 109 5 0.7264706 89 5 0.7085708 100 5 0.6976754 88 5 0.6200000 50 5 0.7420290 112 5 0.8197623 0.577951 0.6525260 0.7187070 0.441337 0.7665025 0.5656996 0.7176441 0.7379066 0.6396040 0.7980498 0.7680339 0.8383388 0.7642259 0.6444771 0.6039604 0.683168 0.8191381 0.8162885 0.790863 0.664074 0.6605375 0.760082 0.7397454 0.780126 0.8168317 0.7996371 0.8513083 0.807078 0.6545743 0.7300032 0.703485 0.6622298 0.5986199 0.71900269 0.1584158 0.672264 0.6189979 0.768492 0.7302811 0.743332 0.6693069 0.7758645 1 0.7306684 0.7390841 -0.01143871 5 0.599429 0.778177 -0.17874805 8.3437e-01 0.47565898 insignificant 1.00000000 1.00000 insignificant 8.9060e-01 0.05051669 insignificant 1.000000 1.00000 insignificant -0.07398031 0.037658 lowCoverage 1 lowCoverage 0.730668 0.6244344 0.0939212 5 0.599429 0.5207450 0.0786838 5.5913e-03 9.9995e-01 weaklyHypermeth 8.8751e-02 1.0000e+00 weaklyHypermeth 3.9094e-02 9.9969e-01 weaklyHypermeth 6.6262e-01 1.0000000 insignificant 0.1208543 1.7240e-01 lowCoverage 1.0000e+00 lowCoverage 0.7321077 0.710706 0.0081178 5 0.7193146 0.7047516 0.01456298 3.7973e-01 3.4946e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.9783e-01 2.8468e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0382604 0.28825051 lowCoverage 1.000000 lowCoverage 0.7390841 0.6244344 0.109794 5 0.778177 0.5207450 0.2574319 7.3654e-05 9.9999e-01 weaklyHypermeth 1.9383e-03 1.0000e+00 weaklyHypermeth 7.7698e-04 1.0000e+00 weaklyHypermeth 2.9884e-02 1.0000e+00 weaklyHypermeth 0.1948346 4.5172e-02 lowCoverage 9.4109e-01 lowCoverage 0.7388060 0.710706 0.0218671 5 0.733812 0.7047516 0.0290606 1.5472e-01 3.7225e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.3742e-01 2.5313e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03571992 0.2403355 lowCoverage 1.00000 lowCoverage 0.6258503 0.710706 -0.08026012 5 0.6248940 0.7047516 -0.0798576 0.9537660 1.0345e-03 weaklyHypometh 1.00000 2.5234e-02 weaklyHypometh 0.9804096 4.1849e-03 weaklyHypometh 1 1.4946e-01 insignificant -0.1591147 8.4952e-02 lowCoverage 1.0000e+00 lowCoverage chr2 169634689 169635689 9058 DHRS9 ENSG00000073737 0.5872442 70 7 0.6467525 49 2 0.466179 50 3 0.6912037 80 7 0.4841270 16 1 0.718413 134 6 0.752315 36 2 0.682099 62 5 0.6750362 48 3 0.5606061 25 2 0.5678170 109 8 0.5300000 22 1 0.8756614 54 5 0.7916667 8 0 0.6141975 24 1 0.6071429 16 1 0.828788 22 1 0.6911310 75 6 0.688360 47 5 0.7071585 91 5 0.574074 25 1 0.796667 38 2 0.604938 56 5 0.7714286 26 2 0.925926 28 1 0.6302048 51 5 0.466667 21 2 0.722222 31 2 0.8166667 36 3 0.591058 53 3 0.7184269 71 8 0.7225962 116 6 0.4422559 45 5 0.480357 36 2 0.753686 36 4 0.500000 4 0 0.763333 42 2 0.7042665 64 7 0.5720238 64 7 0.5889683 73 7 0.86250000 42 3 0.7261905 20 0 0.760000 45 6 0.7745671 0.5307248 0.5889098 0.8267857 0.6207483 0.7756133 0.7872024 0.7251984 0.7611413 0.8046537 0.7969540 0.5625000 0.9600340 0.8437626 0.6974206 0.5742048 0.8609904 0.8864796 0.7367347 0.8363095 0.726190 0.7142857 0.801183 0.715995 0.9747937 0.7784587 0.7740752 0.7765108 0.815476 0.8221841 0.7567210 0.8094093 0.7421537 0.4158163 0.77095543 NA 0.910714 0.8707691 0.6802721 0.6643707 0.8035714 0.6453019 0.7693452 0 0.7148362 0.7318841 -0.02935993 5 0.646434 0.692676 -0.04624218 0.918794 0.11765995 insignificant 1 1.00000 insignificant 0.940115 0.1141712 insignificant 1 1.00000 insignificant -0.0367780 0.41149747 lowCoverage 1.00000 lowCoverage 0.7148362 0.687225 0.0158369 2 0.646434 0.631728 0.0147058 2.6679e-01 7.5515e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 4.4820e-01 8.7426e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 0.0509785 4.6139e-01 lowCoverage 1.00000000 lowCoverage 0.7148362 0.7213115 0.01431620 6 0.646434 0.6262918 0.0201423 2.8842e-01 7.1742e-01 insignificant 1.0000e+00 1.00000000 insignificant 4.6569e-01 6.6352e-01 insignificant 1.0000e+00 1.000000 insignificant -0.04364158 4.9339e-01 lowCoverage 1.0000000 lowCoverage 0.7318841 0.687225 0.0533021 2 0.692676 0.631728 0.06094798 7.9450e-02 8.6055e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 1.5649e-01 9.8784e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 0.0877564 2.4688e-01 lowCoverage 1.0000000 lowCoverage 0.7318841 0.7213115 0.0556211 5 0.692676 0.6262918 6.6384e-02 1.4329e-01 0.9719854 insignificant 1.0000e+00 1.00000 insignificant 3.1822e-01 0.9823762 insignificant 1.00000000 1 insignificant -0.0068636 9.1931e-01 lowCoverage 1.000000 lowCoverage 0.687225 0.7213115 0.0152340 2 0.631728 0.6262918 0.0054365 0.46776770 3.5753e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 9.3327e-01 5.1585e-01 lowCoverage 1.000000 1.0000e+00 lowCoverage -0.0946200 0.27534410 lowCoverage 1.00000 lowCoverage chr2 169928589 169929589 9064 LRP2 ENSG00000081479 0.0010352 703 20 0.0028846 465 20 0.065756 400 20 0.0013228 581 20 0.0011905 195 17 0.049034 1031 20 0.026419 471 20 0.050193 480 20 0.0048491 455 20 0.0074263 413 20 0.0115135 558 20 0.0036985 457 18 0.0038668 446 20 0.0270270 71 2 0.0055852 480 20 0.0107143 228 20 0.013663 316 18 0.0077763 627 20 0.049587 364 20 0.0062063 777 20 0.073333 194 10 0.001287 520 20 0.014831 459 20 0.0096154 236 18 0.005719 282 18 0.0033757 728 20 0.003870 471 19 0.017308 177 15 0.0136693 343 20 0.000000 643 20 0.0017857 779 20 0.0062358 1014 20 0.0100125 330 20 0.011785 322 20 0.100000 262 8 0.007381 232 19 0.017105 199 14 0.0570738 592 20 0.0042014 1177 20 0.0097990 904 20 0.00000000 777 20 0.0022576 867 20 0.011997 1038 20 0.0011382 0.0076269 0.0253954 0.0018906 0.0033050 0.0068187 0.0076064 0.0071459 0.0021100 0.0064993 0.0119063 0.0086892 0.0061882 NA 0.0050906 0.0103777 0.0178464 0.0094298 0.0029748 0.0067215 0.040576 0.0016273 0.029937 0.030507 0.0151208 0.0049272 0.0103155 0.0031414 0.018372 0.0000000 0.0011687 0.0123672 0.0099053 0.0155952 0.01818613 0.00774121 0.013056 0.0094432 0.0095214 0.0073489 0.0000000 0.0025941 0.0078849 11 0.0074596 0.0084034 -0.00105898 20 0.090532 0.017962 0.07256964 0.386554 0.90518604 insignificant 1 1.00000 insignificant 0.569263 0.9875394 insignificant 1 1.00000 insignificant 0.0049016 0.50908020 insignificant 1.00000 insignificant 0.0074603 0.011874 -0.0018905 20 0.094304 0.060293 0.0340104 9.8350e-01 8.0845e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.5802e-01 5.1755e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0164055 3.4186e-01 insignificant 1.00000000 insignificant 0.0070430 0.0052488 0.00070402 20 0.011968 0.0057627 0.0062052 8.4327e-01 7.4660e-01 insignificant 1.0000e+00 1.00000000 insignificant 9.3463e-01 6.2880e-01 insignificant 1.0000e+00 1.000000 insignificant 0.01183645 2.7924e-02 weaklyHypermeth 0.9628926 insignificant 0.0084062 0.011874 -0.0010049 20 0.018710 0.060293 -0.04158294 9.8839e-01 1.8226e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.8986e-01 2.3799e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0213071 2.3502e-01 insignificant 1.0000000 insignificant 0.0082687 0.0052488 0.0021987 20 0.017165 0.0057627 1.1402e-02 9.3226e-01 0.5416910 insignificant 1.0000e+00 1.00000 insignificant 9.7167e-01 0.7128955 insignificant 1.00000000 1 insignificant 0.0069348 2.8177e-01 insignificant 1.000000 insignificant 0.010858 0.0052488 0.0028165 20 0.020320 0.0057627 0.0145574 0.68371474 8.9555e-01 insignificant 1.00000 1.0000e+00 insignificant 9.0952e-01 9.6884e-01 insignificant 1.000000 1.0000e+00 insignificant 0.0282420 0.12346689 insignificant 1.00000 insignificant chr2 170298389 170299389 9071 KLHL23 ENSG00000213160 0.0229816 2156 72 0.0262102 2062 74 0.012584 2670 77 0.0426496 1468 52 0.0112495 1926 73 0.097409 2706 76 0.017451 3015 76 0.017180 1853 76 0.0224203 2187 77 0.0081618 2543 77 0.0250475 2648 76 0.0054608 2731 73 0.0587925 2172 77 0.1427850 480 16 0.0165601 3053 77 0.0167489 2833 75 0.022120 1841 65 0.0387268 1675 64 0.021345 2248 77 0.0459273 2692 77 0.055627 757 62 0.019732 901 37 0.070936 1819 77 0.0567181 950 61 0.025590 710 33 0.0303396 3021 79 0.042505 1874 72 0.040884 774 56 0.0133699 1486 72 0.045494 2704 79 0.0147514 2871 79 0.0390257 3296 75 0.0332205 1513 72 0.027990 1816 65 0.068053 1015 27 0.000000 721 59 0.066864 696 54 0.0787791 2555 79 0.0157427 2912 78 0.0390765 2177 72 0.00229885 1677 70 0.0178284 2371 72 0.062836 2043 66 0.0075331 0.0052929 0.0039096 0.0111218 0.0086924 0.0073477 0.0068067 0.0041908 0.0077219 0.0043417 0.0173354 0.0047733 0.0086292 NA 0.0118443 0.0031346 0.0150984 0.0041046 0.0111670 0.0110000 0.028708 0.0045662 0.010022 0.014767 0.0087334 0.0049812 0.0072869 0.0109971 0.012865 0.0065863 0.0027429 0.0044436 0.0075542 0.0099073 0.02767910 0.00031683 0.025750 0.0084701 0.0029781 0.0056512 0.0011597 0.0049291 0.0128525 37 0.0094982 0.0093091 0.00045726 77 0.068677 0.066157 0.00252014 0.845549 0.99350933 insignificant 1 1.00000 insignificant 0.888929 0.9996225 insignificant 1 1.00000 insignificant -0.0043239 0.63654159 insignificant 1.00000 insignificant 0.0094338 0.011544 -0.0024728 69 0.064062 0.072396 -0.0083339 9.9914e-01 9.7949e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9951e-01 9.9998e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0122273 4.1932e-01 insignificant 1.00000000 insignificant 0.0089861 0.0044723 0.00325249 76 0.041635 0.0691542 -0.0275187 6.3435e-01 1.0000e+00 insignificant 1.0000e+00 1.00000000 insignificant 8.8330e-01 1.0000e+00 insignificant 1.0000e+00 1.000000 insignificant 0.00603407 6.5308e-01 insignificant 1.0000000 insignificant 0.0091730 0.011544 -0.0033137 69 0.054163 0.072396 -0.01823344 9.9999e-01 9.7388e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.0000e+00 9.9990e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0079034 5.7487e-01 insignificant 1.0000000 insignificant 0.0087320 0.0044727 0.0024961 76 0.047271 0.0699141 -2.2643e-02 9.9924e-01 1.0000000 insignificant 1.0000e+00 1.00000 insignificant 9.9996e-01 1.0000000 insignificant 1.00000000 1 insignificant 0.0103579 4.1372e-01 insignificant 1.000000 insignificant 0.010875 0.0043840 0.0057269 68 0.061557 0.0651354 -0.0035784 0.99995656 1.0000e+00 insignificant 1.00000 1.0000e+00 insignificant 1.0000e+00 1.0000e+00 insignificant 1.000000 1.0000e+00 insignificant 0.0182614 0.29171833 insignificant 1.00000 insignificant chr2 170777789 170778789 9088 MYO3B ENSG00000071909 0.7204118 302 8 0.6600905 334 9 0.746621 248 9 0.8467803 270 8 0.7830714 191 8 0.830046 484 9 0.763987 246 9 0.715388 239 9 0.7100609 183 9 0.9317621 186 9 0.7905723 351 9 0.5885773 110 7 0.6712974 251 9 0.7623810 93 5 0.7946761 243 9 0.8176798 113 8 0.723948 52 3 0.6918597 300 8 0.551642 313 8 0.7806319 414 9 0.765620 97 8 0.720099 145 8 0.706868 210 9 0.5869303 115 8 0.642525 122 7 0.7895652 403 8 0.665497 291 8 0.698784 136 8 0.7426343 317 8 0.679916 410 8 0.6701375 421 8 0.7052847 516 9 0.2861205 353 9 0.285547 221 8 0.129880 455 8 0.389824 63 5 0.284980 325 9 0.2839428 368 8 0.7517612 405 8 0.6240900 373 8 0.63841499 239 8 0.4385311 281 8 0.808257 294 8 0.6982538 0.6782936 0.7466548 0.8407626 0.7806930 0.8546180 0.7095316 0.7086888 0.7331230 0.8788317 0.7761988 0.5721460 0.6413967 0.7523035 0.7901350 0.9234167 0.7040560 0.6722198 0.5660928 0.7659465 0.869428 0.6053209 0.696356 0.480094 0.7011960 0.7867948 0.6717693 0.6496382 0.764864 0.6946613 0.7523445 0.7069303 0.2426242 0.2518738 0.10331773 0.33327286 0.199661 0.2456953 0.7159143 0.6892263 0.6341031 0.4617966 0.7790269 8 0.7251676 0.7090795 0.01377537 8 0.719247 0.700935 0.01831113 0.403589 0.94506015 insignificant 1 1.00000 insignificant 0.090523 0.9920498 insignificant 1 1.00000 insignificant 0.0462527 0.07654083 insignificant 1.00000 insignificant 0.7251272 0.169748 0.5134707 8 0.742615 0.307354 0.4352609 4.5884e-46 1.0000e+00 hypermethylated 4.5884e-43 1.0000e+00 hypermethylated 3.4928e-19 1.0000e+00 hypermethylated 3.4928e-16 1.00000000 hypermethylated 0.4673585 1.1827e-06 hypermethylated 0.00023654 hypermethylated 0.7251272 0.6501256 0.07689670 8 0.742615 0.6523183 0.0902970 4.2330e-03 9.9982e-01 weaklyHypermeth 4.2330e-01 1.00000000 insignificant 4.1110e-03 9.9927e-01 weaklyHypermeth 6.8517e-01 1.000000 insignificant 0.09186331 2.2847e-01 insignificant 1.0000000 insignificant 0.7088328 0.169748 0.5136890 8 0.706907 0.307354 0.39955224 6.1757e-43 9.9998e-01 hypermethylated 6.1757e-40 1.0000e+00 hypermethylated 4.0436e-15 1.0000e+00 hypermethylated 4.0436e-12 1.0000000 hypermethylated 0.4211057 7.5718e-06 hypermethylated 0.0018929 hypermethylated 0.7088328 0.6501256 0.0698957 8 0.706907 0.6523183 5.4588e-02 5.5682e-03 0.9829324 weaklyHypermeth 4.2832e-01 1.00000 insignificant 5.1027e-02 0.9401762 insignificant 1.00000000 1 insignificant 0.0456106 5.2075e-01 insignificant 1.000000 insignificant 0.169748 0.6501256 -0.4577705 8 0.307354 0.6523183 -0.3449639 0.99998539 1.6907e-18 hypomethylated 1.00000 8.4537e-16 hypomethylated 9.9997e-01 1.7108e-09 hypomethylated 1.000000 1.7108e-06 hypomethylated -0.3754952 0.00180549 weaklyHypometh 0.30091 insignificant chr2 172665889 172666889 9138 DLX1 ENSG00000144355 0.0096154 193 8 0.0399639 185 7 0.029958 432 8 0.0322917 74 8 0.0043103 174 8 0.162680 246 7 0.027991 343 8 0.014310 269 8 0.0134478 417 8 0.0215701 295 8 0.0073944 357 8 0.0139451 406 8 0.0052083 279 7 NA 0 0 0.0242031 266 7 0.0294800 450 8 0.022308 560 8 0.0333333 66 6 0.000000 107 8 0.0256350 352 7 0.178571 25 2 0.000000 57 6 0.024866 277 8 0.2083333 40 5 0.000000 24 4 0.0156828 472 8 0.149351 72 5 0.190476 37 4 0.0000000 204 8 0.001462 429 8 0.0042813 398 8 0.0505077 496 8 0.1117346 150 7 0.044636 128 8 0.000000 12 0 0.416667 44 5 0.343750 25 1 0.0801098 423 8 0.0091856 292 8 0.0051994 323 8 0.00000000 89 8 0.0306511 244 8 0.050000 64 8 0.0173511 0.0105010 0.0302495 0.0250627 0.0064817 0.0803730 0.0407278 0.0201514 0.0177245 0.0268787 0.0064329 0.0158549 0.0093985 NA 0.0327005 0.0338926 0.0365470 0.0182957 0.0000000 0.0165915 0.084586 0.0000000 0.018587 0.057644 0.0142692 0.0158652 0.0478469 0.0776942 0.000000 0.0025722 0.0065613 0.0406333 0.1223117 0.0447829 0.01720063 0.27474937 0.265038 0.0724669 0.0094441 0.0044010 0.0000000 0.0373648 0.0150376 2 0.0206544 0.0209486 0.00052173 8 0.021424 0.021066 0.00035820 0.251888 0.67423198 insignificant 1 1.00000 insignificant 0.061458 0.4689424 insignificant 1 1.00000 insignificant -0.0413831 0.13476607 insignificant 1.00000 insignificant 0.0206544 0.102302 -0.0817709 8 0.021424 0.100986 -0.0795621 1.0000e+00 1.9582e-12 weaklyHypometh 1.0000e+00 9.7912e-10 weaklyHypometh 9.9991e-01 3.8643e-07 weaklyHypometh 1.0000e+00 0.00038643 weaklyHypometh -0.1389051 1.0428e-01 lowCoverage 1.00000000 lowCoverage 0.0206544 0.0128458 0.00907999 8 0.021424 0.0141645 0.0072597 6.6908e-02 9.7578e-01 insignificant 1.0000e+00 1.00000000 insignificant 3.0437e-02 9.6580e-01 weaklyHypermeth 1.0000e+00 1.000000 insignificant 0.00823727 5.1622e-01 insignificant 1.0000000 insignificant 0.0209486 0.102302 -0.0816408 8 0.021066 0.100986 -0.07992029 1.0000e+00 5.6092e-08 weaklyHypometh 1.0000e+00 5.6092e-05 weaklyHypometh 9.9943e-01 3.3654e-06 weaklyHypometh 1.0000e+00 0.0033654 weaklyHypometh -0.0975220 2.3498e-01 lowCoverage 1.0000000 lowCoverage 0.0209486 0.0128458 0.0094215 8 0.021066 0.0141645 6.9015e-03 1.3332e-01 0.8277917 insignificant 1.0000e+00 1.00000 insignificant 1.8135e-01 0.9517831 insignificant 1.00000000 1 insignificant 0.0496204 8.2227e-02 insignificant 1.000000 insignificant 0.102302 0.0128458 0.0910468 8 0.100986 0.0141645 0.0868218 0.00008709 1.0000e+00 weaklyHypermeth 0.08709 1.0000e+00 weaklyHypermeth 5.3654e-05 9.9998e-01 weaklyHypermeth 0.053654 1.0000e+00 weaklyHypermeth 0.1471423 0.08975711 lowCoverage 1.00000 lowCoverage chr2 173879689 173880689 9175 ENSG00000091436 0.7930812 238 7 0.6714286 128 7 0.860859 116 7 0.9012531 122 7 0.7432540 47 6 0.700020 250 7 0.798281 137 7 0.828401 92 7 0.7294372 128 7 0.7382189 63 7 0.7954995 206 7 0.8340336 90 7 0.7692649 129 7 NA 0 0 0.7580284 153 7 0.8018707 103 7 0.693001 72 7 0.9109977 164 7 0.803901 118 7 0.8194999 272 7 0.747619 57 7 0.617176 130 7 0.843108 147 7 0.7759225 69 7 0.745748 48 7 0.8677784 108 7 0.758719 79 7 0.777473 58 5 0.8075964 52 7 0.783357 187 7 0.7582161 110 7 0.6341154 396 7 0.8123916 111 7 0.750867 124 7 0.658915 128 3 0.814006 100 7 0.709014 73 7 0.6917582 112 7 0.7353191 249 7 0.8886587 318 7 0.87164262 200 7 0.8477987 288 7 0.718139 162 7 0.7916303 0.6625879 0.8597332 0.9011432 0.7454055 0.6923219 0.7894007 0.8351216 0.7275157 0.7363746 0.7914861 0.8320427 0.7750623 NA 0.7569818 0.7988748 0.6777266 0.9162816 0.8004244 0.8090091 0.752157 0.6141648 0.842526 0.781332 0.7390496 0.8577691 0.7487117 0.7914476 0.811711 0.7816657 0.7569770 0.6223521 0.8106797 0.7532646 0.71215530 0.82282854 0.718186 0.6824732 0.7318205 0.8849148 0.8727034 0.8507958 0.6988536 7 0.7857686 0.7328244 0.05149727 7 0.786710 0.735622 0.05108753 0.015047 0.99975748 weaklyHypermeth 1 1.00000 insignificant 0.155468 0.9842168 insignificant 1 1.00000 insignificant 0.0271239 0.30677351 insignificant 1.00000 insignificant 0.7857686 0.800926 -0.0176689 7 0.786710 0.779385 0.0073246 1.5724e-01 2.3178e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.5219e-01 3.7869e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0473678 1.5404e-01 insignificant 1.00000000 insignificant 0.7857686 0.8299096 -0.03958956 7 0.786710 0.8264427 -0.0397331 9.8398e-01 1.4538e-01 insignificant 1.0000e+00 1.00000000 insignificant 8.9524e-01 1.1717e-01 insignificant 1.0000e+00 1.000000 insignificant -0.02545201 5.3728e-01 insignificant 1.0000000 insignificant 0.7328244 0.800926 -0.0694345 7 0.735622 0.779385 -0.04376293 7.0137e-01 3.1691e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 6.2586e-01 1.2566e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0202438 5.5938e-01 insignificant 1.0000000 insignificant 0.7328244 0.8299096 -0.0913707 7 0.735622 0.8264427 -9.0821e-02 9.9984e-01 0.0029528 weaklyHypometh 1.0000e+00 0.63182 insignificant 9.7882e-01 0.0769544 insignificant 1.00000000 1 insignificant -0.0525760 2.4479e-01 insignificant 1.000000 insignificant 0.800926 0.8299096 -0.0248364 7 0.779385 0.8264427 -0.0470577 0.74773156 2.8589e-01 insignificant 1.00000 1.0000e+00 insignificant 8.2573e-01 1.0415e-01 insignificant 1.000000 1.0000e+00 insignificant -0.0728198 0.14007300 insignificant 1.00000 insignificant chr2 174791289 174792289 9211 SP3 ENSG00000172845 0.9005234 174 5 0.8645607 202 6 0.559798 60 5 0.7793267 163 5 0.7911371 43 2 0.889119 329 6 0.488889 35 1 0.846263 118 6 0.7825280 52 6 0.9679909 61 4 0.9373601 196 6 0.7361111 18 1 0.8629678 104 5 0.9000000 13 1 0.9345238 40 3 0.6000000 9 0 0.666667 13 0 0.9358924 150 5 0.923032 145 5 0.9024245 252 6 0.763889 34 3 0.916005 52 5 0.868020 69 6 0.7918981 43 4 0.772222 38 2 0.9410335 263 5 0.826038 74 5 0.500000 13 1 0.8371233 117 5 0.861727 324 5 0.9233208 272 6 0.8882087 306 6 0.8386364 156 6 0.853499 76 5 0.828571 163 3 0.611111 34 1 0.900585 65 4 0.9407362 229 5 0.8802008 161 6 0.9285148 126 5 0.85585996 180 5 0.7556268 64 5 0.892863 119 6 0.8787349 0.7933874 0.5620417 0.8044743 0.8120361 0.8783372 0.6008456 0.8097948 0.7728682 0.9351833 0.9048889 0.8046448 0.7882911 0.8542377 0.9303279 0.7320365 0.6939891 0.9184248 0.8809026 0.8922672 0.704918 0.8840099 0.849061 0.802482 0.7311475 0.9049079 0.7626450 0.4098361 0.833327 0.8418360 0.8659574 0.8741440 0.8517493 0.8832233 0.81061671 0.74043716 0.862957 0.9355039 0.8641352 0.8784898 0.8743069 0.6932710 0.8667432 0 0.8474966 0.8722741 -0.00988624 6 0.886442 0.896095 -0.00965317 0.956707 0.52177726 insignificant 1 1.00000 insignificant 0.571241 0.7950680 insignificant 1 1.00000 insignificant -0.0106681 0.81779750 lowCoverage 1.00000 lowCoverage 0.8474966 0.832642 0.0057902 5 0.886442 0.853170 0.0332721 1.4510e-01 8.6515e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.6658e-01 3.9124e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0154008 7.8925e-01 lowCoverage 1.00000000 lowCoverage 0.8472861 0.8538462 -0.01442623 5 0.867515 0.8787062 -0.0111910 9.0054e-01 3.0361e-01 insignificant 1.0000e+00 1.00000000 insignificant 7.7282e-01 3.6829e-01 insignificant 1.0000e+00 1.000000 insignificant -0.04915733 2.6617e-01 lowCoverage 1.0000000 lowCoverage 0.8722741 0.832642 0.0177623 5 0.896095 0.853170 0.04292523 9.8949e-02 8.6537e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.8703e-01 3.0395e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0047327 9.3634e-01 lowCoverage 1.0000000 lowCoverage 0.8721945 0.8538462 -0.0067167 5 0.878777 0.8787062 7.0988e-05 6.7154e-01 0.5907573 insignificant 1.0000e+00 1.00000 insignificant 8.2305e-01 0.3668240 insignificant 1.00000000 1 insignificant -0.0384892 4.0520e-01 lowCoverage 1.000000 lowCoverage 0.832410 0.8538462 -0.0146768 5 0.828698 0.8787062 -0.0500084 0.84604839 1.7640e-01 insignificant 1.00000 1.0000e+00 insignificant 4.4460e-01 6.2891e-01 insignificant 1.000000 1.0000e+00 insignificant -0.0337565 0.55749928 lowCoverage 1.00000 lowCoverage chr2 174798089 174799089 9212 SP3 ENSG00000172845 0.8587176 439 14 0.6552406 157 13 0.632143 105 9 0.9112723 342 13 0.7167677 73 7 0.871095 350 14 0.964815 62 5 0.879870 66 6 0.8756614 47 5 0.7054602 91 10 0.8541457 251 14 0.6989796 52 4 0.8833189 99 10 NA 0 0 0.8939103 90 10 0.7462963 55 4 0.788690 37 3 0.8487336 336 14 0.828384 161 13 0.8260714 278 14 0.827201 55 6 0.862870 112 7 0.886579 185 15 0.9722222 53 5 0.698724 63 6 0.8662323 226 13 0.949704 127 8 0.871212 40 2 0.7916667 72 6 0.761780 191 11 0.8821675 183 12 0.8523466 424 12 0.6938562 130 8 0.754257 154 9 0.771189 264 14 0.802778 83 8 0.697619 45 5 0.7705105 252 13 0.8562664 371 14 0.8399210 445 14 0.91385578 446 14 0.9025990 382 14 0.912070 389 14 0.8912667 0.7057388 0.9026984 0.9517059 0.8292525 0.8808127 0.9266667 0.8180808 0.8369841 0.8006154 0.8617692 0.8792063 0.8761385 NA 0.9011111 0.7648148 0.6755556 0.8661966 0.9506869 0.8901048 0.851969 0.8707593 0.912039 0.969758 0.8421429 0.9138815 0.9670769 0.8588889 0.769815 0.7866116 0.9657018 0.8769341 0.7928039 0.7641679 0.85989370 0.85347941 0.831030 0.8635803 0.8949399 0.8343298 0.9376234 0.9382925 0.9261957 3 0.8553866 0.8657407 -0.01713270 11 0.846737 0.830852 0.01588509 0.933181 0.43770640 insignificant 1 1.00000 insignificant 0.967608 0.1608195 insignificant 1 1.00000 insignificant -0.0392831 0.21013303 insignificant 1.00000 insignificant 0.8552930 0.803668 0.0435860 13 0.836520 0.781997 0.0545226 2.5751e-02 9.9875e-01 weaklyHypermeth 5.8653e-01 1.0000e+00 insignificant 3.2226e-02 9.9946e-01 weaklyHypermeth 1.0000e+00 1.00000000 insignificant 0.0642408 3.2987e-02 weaklyHypermeth 1.00000000 insignificant 0.8552930 0.8996063 -0.03920751 13 0.836520 0.8794291 -0.0429092 9.9852e-01 8.6943e-02 insignificant 1.0000e+00 1.00000000 insignificant 9.6063e-01 2.5707e-01 insignificant 1.0000e+00 1.000000 insignificant -0.07233340 1.3147e-02 weaklyHypometh 0.7903787 insignificant 0.8663968 0.802802 0.0611827 11 0.862102 0.733122 0.12897980 3.3641e-03 9.9993e-01 weaklyHypermeth 1.1600e-01 1.0000e+00 insignificant 1.3607e-03 9.9997e-01 weaklyHypermeth 9.7193e-02 1.0000000 weaklyHypermeth 0.1035239 2.1565e-03 weaklyHypermeth 0.1797050 insignificant 0.8663968 0.8996557 -0.0179956 11 0.862102 0.8869647 -2.4862e-02 9.8778e-01 0.3860330 insignificant 1.0000e+00 1.00000 insignificant 8.1792e-01 0.9547195 insignificant 1.00000000 1 insignificant -0.0330503 2.3479e-01 insignificant 1.000000 insignificant 0.802802 0.8996557 -0.0866250 13 0.733122 0.8869647 -0.1538423 0.99997990 4.8539e-05 weaklyHypometh 1.00000 3.0337e-03 weaklyHypometh 1.0000e+00 7.3351e-04 weaklyHypometh 1.000000 6.4715e-02 weaklyHypometh -0.1365742 0.00026184 weaklyHypometh 0.08728 weaklyHypometh chr2 175570189 175571189 9222 ENSG00000201425 0.6191788 149 7 0.7331751 236 6 0.751554 84 6 0.8244646 201 7 0.7511853 67 6 0.646501 191 7 0.417985 111 5 0.754224 108 6 0.5511364 47 3 0.5627473 71 5 0.6122230 259 7 0.2990057 42 3 0.7423077 76 5 0.7834416 46 5 0.8251733 99 6 0.6928571 21 1 0.704167 39 4 0.8006126 218 6 0.784306 168 6 0.8571473 171 7 0.565179 53 4 0.618947 51 3 0.870468 123 7 0.6311448 47 3 0.820357 127 5 0.8227994 213 7 0.880519 68 3 0.509385 64 4 0.8656295 187 6 0.755131 213 8 0.7275378 237 10 0.6670891 173 7 0.7063173 183 7 0.677256 148 6 0.475490 63 4 0.733333 21 2 0.485615 75 4 0.7388977 258 7 0.7997446 115 6 0.8624888 186 6 0.78937833 132 5 0.7113019 77 4 0.921374 201 7 0.7625718 0.7274501 0.6521969 0.8754653 0.7192500 0.7307450 0.5954053 0.7920842 0.7316562 0.7624991 0.7830453 0.4622642 0.7326238 0.7596913 0.7726720 0.5650943 0.7746331 0.8151053 0.8528583 0.8494398 0.679358 0.7054881 0.783982 0.696055 0.7375921 0.8194633 0.8184677 0.6557348 0.848718 0.7516698 0.8129847 0.7933522 0.6392708 0.6563405 0.36337051 0.74785490 0.593616 0.6862534 0.7253875 0.8614687 0.7896124 0.7742464 0.9048794 2 0.7762063 0.7969152 -0.00550495 6 0.657590 0.683400 -0.02580978 0.627820 0.14563648 insignificant 1 1.00000 insignificant 0.820556 0.0569760 insignificant 1 1.00000 insignificant -0.0421792 0.39523348 insignificant 1.00000 insignificant 0.7762063 0.659091 0.1089794 6 0.657590 0.683848 -0.0262574 7.8537e-03 6.5479e-01 weaklyHypermeth 2.3799e-01 1.0000e+00 insignificant 1.9598e-01 7.0755e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0495181 4.2433e-01 insignificant 1.00000000 insignificant 0.7762938 0.8157525 -0.06175527 6 0.649190 0.8610918 -0.2119023 9.9512e-01 3.2929e-04 weaklyHypometh 1.0000e+00 0.06585881 weaklyHypometh 9.7912e-01 2.1821e-04 weaklyHypometh 1.0000e+00 0.109104 insignificant -0.13118782 1.8225e-02 weaklyHypometh 0.8741452 insignificant 0.7969152 0.659091 0.1173692 6 0.683400 0.683848 -0.00044764 2.3836e-03 9.0720e-01 weaklyHypermeth 8.5129e-02 1.0000e+00 weaklyHypermeth 1.0063e-01 9.5344e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0916973 1.6962e-01 insignificant 1.0000000 insignificant 0.7972886 0.8157525 -0.0574677 6 0.680592 0.8610918 -1.8050e-01 9.9953e-01 0.0394085 weaklyHypometh 1.0000e+00 1.00000 insignificant 9.9125e-01 0.0096722 weaklyHypometh 1.00000000 1 insignificant -0.0890086 1.0749e-01 insignificant 1.000000 insignificant 0.659060 0.8157525 -0.1788025 6 0.685410 0.8610918 -0.1756821 0.99920734 2.7914e-03 weaklyHypometh 1.00000 9.3048e-02 weaklyHypometh 9.9944e-01 4.7946e-02 weaklyHypometh 1.000000 1.0000e+00 insignificant -0.1807059 0.01717757 weaklyHypometh 1.00000 insignificant chr2 177063189 177064189 9236 ENSG00000221304 0.1604342 1229 33 0.1280563 1342 33 0.388824 794 33 0.0952405 802 26 0.3328978 404 30 0.222858 1282 33 0.196579 473 30 0.382787 739 33 0.1766614 786 34 0.1760960 817 33 0.2036592 1215 33 0.1420731 741 33 0.4336128 714 33 0.2819953 128 9 0.2607056 876 33 0.1023877 516 29 0.161583 581 27 0.1935844 889 26 0.261704 559 31 0.3897136 1071 33 0.117779 526 33 0.116423 479 24 0.193068 1002 33 0.1140200 492 30 0.453912 298 20 0.6433674 696 31 0.190084 711 33 0.206018 357 27 0.1755280 971 33 0.358513 1068 33 0.5470479 842 33 0.1116911 1474 33 0.5451723 549 29 0.549611 574 32 0.627526 665 26 0.182876 307 20 0.482633 374 30 0.0357943 1152 33 0.2864164 1364 32 0.2637022 1074 33 0.48187683 812 26 0.2397632 1011 32 0.287409 1241 32 0.1316945 0.1150532 0.3775311 0.0919426 0.3219452 0.2007196 0.1744264 0.3250487 0.1408774 0.1745578 0.1946022 0.1392571 0.3672875 0.2444163 0.2580052 0.0851968 0.1384276 0.1726363 0.2282086 0.3551240 0.141009 0.1309926 0.157050 0.114591 0.4132968 0.6241773 0.1948059 0.2302316 0.157827 0.3281701 0.5313465 0.1174595 0.5573711 0.5783266 0.60211708 0.24239587 0.535120 0.0470036 0.2111641 0.2114850 0.4793108 0.2324079 0.2062949 20 0.2114927 0.2518236 -0.04474890 33 0.237304 0.237997 -0.00069265 0.997634 0.02480318 weaklyHypometh 1 1.00000 insignificant 0.988610 0.5078959 insignificant 1 1.00000 insignificant -0.0343816 0.56431736 insignificant 1.00000 insignificant 0.2114010 0.390776 -0.1844725 33 0.225400 0.353433 -0.1280327 9.6577e-01 2.7178e-14 weaklyHypometh 1.0000e+00 2.7178e-11 weaklyHypometh 7.4201e-01 2.9525e-06 weaklyHypometh 1.0000e+00 0.00147626 weaklyHypometh -0.1693628 1.4374e-01 insignificant 1.00000000 insignificant 0.2114830 0.2408215 -0.04612811 32 0.236952 0.2955626 -0.0586108 9.9192e-01 6.4408e-07 weaklyHypometh 1.0000e+00 0.00064408 weaklyHypometh 9.9983e-01 9.5583e-04 weaklyHypometh 1.0000e+00 0.238958 insignificant -0.07726078 1.6334e-01 insignificant 1.0000000 insignificant 0.2520216 0.390776 -0.1359277 33 0.258997 0.353433 -0.09443581 9.0932e-01 3.7322e-04 weaklyHypometh 1.0000e+00 1.8661e-01 insignificant 6.1784e-01 5.8774e-04 weaklyHypometh 1.0000e+00 0.2938706 insignificant -0.1349812 2.5689e-01 insignificant 1.0000000 insignificant 0.2519367 0.2408215 -0.0020082 32 0.244608 0.2955626 -5.0955e-02 8.5677e-01 0.1455582 insignificant 1.0000e+00 1.00000 insignificant 9.8527e-01 0.0879931 insignificant 1.00000000 1 insignificant -0.0428792 5.4425e-01 insignificant 1.000000 insignificant 0.390776 0.2407710 0.1295514 32 0.353433 0.2835369 0.0698957 0.23810718 9.8610e-01 insignificant 1.00000 1.0000e+00 insignificant 3.3995e-01 8.6480e-01 insignificant 1.000000 1.0000e+00 insignificant 0.0921020 0.41503515 insignificant 1.00000 insignificant chr2 177063489 177064489 9237 ENSG00000221304 0.1440521 655 17 0.1796652 338 17 0.396551 316 17 0.0665954 524 13 0.4230621 157 16 0.195244 647 17 0.248332 170 14 0.442469 292 17 0.2172653 379 17 0.1685821 432 17 0.2206760 452 17 0.1579749 358 17 0.4504262 329 17 0.2125000 19 3 0.2901179 361 17 0.0715939 209 13 0.122756 407 17 0.1375407 576 13 0.298496 151 16 0.4089673 482 17 0.117827 213 17 0.067124 330 14 0.189917 579 17 0.1062046 173 17 0.425396 185 13 0.6864636 303 17 0.198766 242 17 0.195198 138 13 0.2250340 211 17 0.401342 395 17 0.5686625 367 17 0.1175529 755 17 0.2737859 306 17 0.413109 293 17 0.446782 245 16 0.062562 218 13 0.233253 135 13 0.0071094 369 17 0.2501600 939 17 0.1935423 653 17 0.52510350 480 14 0.1531055 706 17 0.267163 765 17 0.1309412 0.1773973 0.3887839 0.0772908 0.3958153 0.2021967 0.2342121 0.3603623 0.1680417 0.1690524 0.2182103 0.1675063 0.4283128 NA 0.2711245 0.0759530 0.1103838 0.1364157 0.2785899 0.3558578 0.137995 0.0670486 0.157108 0.118429 0.3777450 0.6575881 0.2087291 0.2121176 0.218029 0.3784179 0.5666810 0.1392764 0.2402165 0.4084723 0.42078260 0.05183641 0.233525 0.0073146 0.1872800 0.1888336 0.4944527 0.1615287 0.2065257 10 0.2240143 0.2634284 -0.04444286 17 0.252025 0.246743 0.00528196 0.994274 0.03959217 weaklyHypometh 1 1.00000 insignificant 0.959862 0.6102760 insignificant 1 1.00000 insignificant -0.0323139 0.61943797 insignificant 1.00000 insignificant 0.2238476 0.254789 -0.0297406 17 0.230695 0.264234 -0.0335396 1.1478e-01 1.9526e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 1.2321e-02 9.2872e-01 inconclusive 5.8430e-01 1.00000000 insignificant 0.0032099 9.6840e-01 insignificant 1.00000000 insignificant 0.2240143 0.2252329 -0.00797709 17 0.252025 0.2712864 -0.0192614 6.2189e-01 1.7100e-01 insignificant 1.0000e+00 1.00000000 insignificant 9.3313e-01 1.8086e-01 insignificant 1.0000e+00 1.000000 insignificant -0.03517143 6.3787e-01 insignificant 1.0000000 insignificant 0.2636317 0.254789 0.0166611 17 0.275772 0.264234 0.01153745 9.2417e-02 8.4384e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.4504e-03 9.7306e-01 weaklyHypermeth 3.3949e-01 1.0000000 insignificant 0.0355238 7.0938e-01 insignificant 1.0000000 insignificant 0.2634284 0.2252329 0.0363972 17 0.246743 0.2712864 -2.4543e-02 3.9276e-01 0.9864869 insignificant 1.0000e+00 1.00000 insignificant 8.1074e-01 0.5680323 insignificant 1.00000000 1 insignificant -0.0028575 9.7438e-01 insignificant 1.000000 insignificant 0.254789 0.2251412 0.0232287 17 0.264234 0.2443789 0.0198552 0.76957954 6.9065e-01 insignificant 1.00000 1.0000e+00 insignificant 9.9978e-01 6.9649e-02 insignificant 1.000000 1.0000e+00 insignificant -0.0383814 0.70372031 insignificant 1.00000 insignificant chr2 177739689 177740689 9268 ENSG00000208195 0.7618693 258 8 0.7195436 341 8 0.735702 142 8 0.7874760 214 8 0.7276786 44 4 0.751297 312 8 0.635417 40 4 0.767921 120 4 0.6392857 47 4 0.8041667 45 4 0.7851599 130 4 0.9375000 15 1 0.8508991 52 4 0.4509804 40 2 0.7448980 55 4 0.5208333 12 0 0.425000 9 1 0.7819756 122 8 0.830172 118 4 0.8593865 206 7 0.738095 28 4 0.866667 31 4 0.749376 143 8 0.7939394 36 4 0.906250 28 4 0.8252138 306 8 0.825855 47 4 0.601190 25 4 0.8623397 102 4 0.792127 381 8 0.8246479 325 8 0.8097467 364 8 0.7387978 270 8 0.432653 51 4 0.674968 134 8 0.500000 3 0 0.771961 49 4 0.6514276 356 8 0.8897123 248 7 0.8002781 262 7 0.78777834 166 7 0.7685676 232 7 0.821828 241 8 0.7366325 0.7261357 0.8052377 0.8140429 0.7369165 0.8029083 0.6468647 0.7763938 0.8013614 0.8212871 0.7938434 0.9331683 0.8568857 0.4713648 0.8128241 0.5099010 0.6431265 0.7810853 0.8300112 0.8508778 0.737860 0.8759076 0.738105 0.750975 0.9183168 0.8174114 0.7819455 0.6181047 0.859647 0.7850109 0.8093572 0.8191137 0.6688773 0.7615276 0.59456902 0.59316600 0.766225 0.7159140 0.8985149 0.8143363 0.7937294 0.7738146 0.8188445 3 0.7817632 0.8232379 -0.03489608 7 0.701815 0.848618 -0.14680265 0.955072 0.00086424 weaklyHypometh 1 0.21606 insignificant 0.986197 0.0067092 weaklyHypometh 1 0.95845 insignificant -0.0737625 0.05718093 lowCoverage 1.00000 lowCoverage 0.7816537 0.742758 0.0516231 7 0.709846 0.599294 0.1105513 3.1515e-04 7.8202e-01 weaklyHypermeth 1.3131e-02 1.0000e+00 weaklyHypermeth 6.2442e-02 7.8228e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0975569 1.5558e-01 lowCoverage 1.00000000 lowCoverage 0.7819905 0.8198433 -0.04684524 7 0.774377 0.8600809 -0.0857037 9.9995e-01 1.9569e-02 weaklyHypometh 1.0000e+00 0.88950405 insignificant 9.9982e-01 3.4011e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.08777471 2.5350e-02 lowCoverage 0.9397383 lowCoverage 0.8232379 0.744457 0.0797180 8 0.848618 0.619153 0.22946416 2.5735e-04 9.9998e-01 weaklyHypermeth 1.4297e-02 1.0000e+00 weaklyHypermeth 5.3578e-03 9.9985e-01 weaklyHypermeth 2.9765e-01 1.0000000 insignificant 0.1713194 2.4351e-02 weaklyHypermeth 1.0000000 insignificant 0.8231405 0.8195292 -0.0048362 7 0.831797 0.8289877 2.8095e-03 4.4119e-01 0.3890244 insignificant 1.0000e+00 1.00000 insignificant 4.7237e-01 0.4701386 insignificant 1.00000000 1 insignificant -0.0140122 6.5697e-01 insignificant 1.000000 insignificant 0.743619 0.8198433 -0.0809173 7 0.653776 0.8600809 -0.2063051 0.97680669 4.2170e-04 weaklyHypometh 1.00000 1.8335e-02 weaklyHypometh 9.8620e-01 6.1336e-03 weaklyHypometh 1.000000 3.0668e-01 insignificant -0.1853316 0.01806029 weaklyHypometh 1.00000 insignificant chr2 177799689 177800689 9269 HNRNPA3 ENSG00000170144 0.8386780 258 9 0.7687621 161 9 0.706438 158 9 0.7989583 218 9 0.7314815 82 7 0.824120 327 9 0.603968 135 9 0.518643 129 8 0.6731402 127 9 0.7091911 131 9 0.7873208 275 9 0.8113960 101 9 0.8492988 179 9 0.7647059 46 3 0.7656620 177 9 0.6061728 79 9 0.562851 78 7 0.8218227 170 7 0.818070 166 9 0.8235968 262 9 0.752778 56 5 0.811020 95 8 0.757554 184 9 0.6388430 72 6 0.899735 52 5 0.8013535 180 9 0.844782 98 7 0.684986 51 5 0.6490028 108 9 0.817200 214 9 0.8078022 176 9 0.8109236 377 9 0.7435973 96 7 0.641188 132 7 0.711158 130 8 0.877922 67 7 0.781019 115 9 0.7467845 179 9 0.8575232 286 9 0.8222424 266 7 0.86263892 256 9 0.8180355 252 7 0.904498 268 9 0.8565575 0.7782559 0.7438373 0.8279469 0.7595486 0.8265734 0.7603891 0.6670723 0.7191632 0.8370224 0.8143266 0.8706375 0.8764559 0.8309299 0.8040508 0.6861111 0.6735848 0.8390984 0.8431997 0.8116570 0.819637 0.7908442 0.790266 0.832765 0.9011243 0.8240497 0.8608097 0.7975379 0.684170 0.8113705 0.8245769 0.8302203 0.6978013 0.6796709 0.73579260 0.83862770 0.856122 0.7607200 0.8864160 0.8351585 0.8801787 0.8598013 0.9136884 4 0.7904265 0.8063740 -0.01319845 9 0.657098 0.688291 -0.03119276 0.867856 0.16792984 insignificant 1 1.00000 insignificant 0.993148 0.1138594 insignificant 1 1.00000 insignificant -0.0337845 0.29838347 insignificant 1.00000 insignificant 0.7910906 0.766342 0.0306230 9 0.694107 0.719360 -0.0252527 3.6613e-02 8.0200e-01 weaklyHypermeth 7.9592e-01 1.0000e+00 insignificant 3.3582e-01 3.8761e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0110644 7.8155e-01 insignificant 1.00000000 insignificant 0.7919360 0.8388554 -0.06759824 9 0.774279 0.8528457 -0.0785668 1.0000e+00 2.0115e-04 weaklyHypometh 1.0000e+00 0.05028746 weaklyHypometh 1.0000e+00 3.5291e-05 weaklyHypometh 1.0000e+00 0.035291 weaklyHypometh -0.11377367 4.6335e-04 weaklyHypometh 0.1158364 insignificant 0.8072289 0.766342 0.0441697 9 0.720560 0.719360 0.00119996 5.5051e-02 9.2428e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.3757e-01 9.8400e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0227201 5.7672e-01 insignificant 1.0000000 insignificant 0.8096970 0.8388554 -0.0545133 9 0.791795 0.8528457 -6.1051e-02 9.9603e-01 0.0031591 weaklyHypometh 1.0000e+00 0.63182 insignificant 9.8085e-01 0.0097113 weaklyHypometh 1.00000000 1 insignificant -0.0799892 1.1763e-02 weaklyHypometh 1.000000 insignificant 0.767085 0.8388554 -0.1025938 9 0.768106 0.8528457 -0.0847393 0.99784957 5.4256e-04 weaklyHypometh 1.00000 2.2607e-02 weaklyHypometh 9.9742e-01 1.6663e-03 weaklyHypometh 1.000000 1.1170e-01 insignificant -0.1027093 0.02297996 weaklyHypometh 1.00000 insignificant chr2 182650189 182651189 9360 ENSG00000208190,ENSG00000222418 0.7735043 75 5 0.6339889 182 6 0.604995 152 6 0.7946970 50 4 0.5613420 41 4 0.888518 258 4 0.580357 58 4 0.669799 82 4 0.6794444 43 4 0.6911111 31 3 0.8253356 111 4 0.4944444 35 4 0.4316667 54 4 0.7244048 30 4 0.4969697 46 4 0.5833333 41 3 NA 0 0 0.6551018 72 4 0.495572 45 4 0.7880815 140 5 0.677778 42 4 0.708333 33 4 0.854678 91 6 0.7600000 30 1 0.875000 16 0 0.8702586 190 6 0.683333 45 3 0.816667 25 2 0.8392857 34 4 0.850258 188 6 0.8024015 158 6 0.7744125 123 4 0.3467274 137 6 0.031250 29 4 0.423291 103 6 1.000000 2 0 0.132695 111 4 0.3773292 173 6 0.7494769 108 5 0.8251096 82 5 0.54642857 26 4 0.7428571 25 4 0.653333 54 4 0.7857966 0.6776365 0.4695968 0.7955397 0.6977844 0.8926129 0.5710273 0.8327914 0.8441948 0.8670412 0.8296439 0.6014357 0.5367978 0.7259230 0.6186585 0.7434457 NA 0.5562714 0.6135939 0.7310804 0.839576 0.7097378 0.845013 0.948315 0.8735955 0.7960965 0.6851257 0.8014981 0.833868 0.7827351 0.7044767 0.8272317 0.2137909 0.0323034 0.16123596 0.61674773 0.173599 0.1883360 0.6190538 0.7270476 0.4469101 0.6677368 0.6488764 0 0.7399741 0.8246154 -0.06685808 4 0.665973 0.731051 -0.06507748 0.999752 0.00049135 lowCoverage 1 0.21606 lowCoverage 0.999780 0.0011658 lowCoverage 1 0.58292 lowCoverage -0.1415075 0.00044836 lowCoverage 0.44836 lowCoverage 0.7399741 0.396396 0.4711846 4 0.665973 0.333965 0.3320088 1.0886e-22 9.9997e-01 lowCoverage 2.7216e-20 1.0000e+00 lowCoverage 6.2578e-06 9.9965e-01 lowCoverage 7.8222e-04 1.00000000 lowCoverage 0.2659777 1.1284e-01 lowCoverage 1.00000000 lowCoverage 0.7399741 0.6779661 0.05840193 4 0.665973 0.6522673 0.0137060 2.0862e-01 2.0712e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 3.6718e-01 4.7668e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage -0.05224811 3.8019e-01 lowCoverage 1.0000000 lowCoverage 0.8246154 0.396396 0.4909562 6 0.731051 0.333965 0.39708627 7.5568e-27 1.0000e+00 hypermethylated 2.5189e-24 1.0000e+00 hypermethylated 2.1805e-06 1.0000e+00 hypermethylated 3.6342e-04 1.0000000 hypermethylated 0.4074852 3.1187e-02 lowCoverage 1.0000000 lowCoverage 0.8246154 0.6779661 0.1250175 4 0.731051 0.6522673 7.8783e-02 1.8536e-03 0.9955703 lowCoverage 1.8536e-01 1.00000 lowCoverage 1.7428e-02 0.8601674 lowCoverage 1.00000000 1 lowCoverage 0.0892594 1.4105e-01 lowCoverage 1.000000 lowCoverage 0.396396 0.6779661 -0.4387976 4 0.333965 0.6522673 -0.3183028 1.00000000 3.5020e-12 lowCoverage 1.00000 8.7550e-10 lowCoverage 1.0000e+00 5.3734e-05 lowCoverage 1.000000 7.6763e-03 lowCoverage -0.3182258 0.07074255 lowCoverage 1.00000 lowCoverage chr2 187504689 187505689 9404 ZSWIM2 ENSG00000163012 0.8821988 105 5 0.6473928 67 5 0.951282 40 5 0.8966667 85 5 0.7877551 30 5 0.818537 179 5 0.896825 33 5 0.724066 111 5 0.8576471 64 5 0.6190476 45 5 0.7124592 115 5 0.9200000 17 3 0.8533333 73 5 0.9000000 23 3 0.8357143 37 5 0.8909091 37 3 0.466667 11 2 0.9125926 89 5 0.929310 76 5 0.8030311 131 5 0.833333 29 3 0.966667 27 4 0.858009 42 5 0.9333333 30 2 0.955556 22 2 0.8809979 101 5 0.750000 30 4 0.960000 19 2 0.8954545 57 3 0.924444 84 5 0.8849453 109 5 0.6832335 172 5 0.6601852 75 5 0.445614 45 2 0.567791 94 4 0.916667 8 0 0.775108 69 5 0.7262255 100 5 0.8084848 60 5 0.9455952 87 5 0.95294118 70 5 0.8577778 49 5 0.963492 56 5 0.8633853 0.7974618 0.9154202 0.8872685 0.8841270 0.7931194 0.8667328 0.8210235 0.8264706 0.8218254 0.8813487 0.9666667 0.8986111 0.8263889 0.8576389 0.9444444 0.6822268 0.9010288 0.8772749 0.8217880 0.842593 0.9421296 0.908911 0.884259 0.9228395 0.8670825 0.7779953 0.9305556 0.870581 0.8981481 0.8155912 0.8459472 0.7372685 0.5815058 0.67112657 0.85686290 0.725649 0.8374183 0.7748316 0.9359292 0.9183007 0.9058642 0.9597663 0 0.8552632 0.8725762 -0.01585195 5 0.787408 0.793014 -0.00560626 0.921733 0.09398851 insignificant 1 1.00000 insignificant 0.986058 0.0582334 insignificant 1 1.00000 insignificant -0.0618927 0.10910145 lowCoverage 1.00000 lowCoverage 0.8552632 0.754476 0.0750222 5 0.787408 0.659995 0.1274128 1.0343e-02 8.9209e-01 weaklyHypermeth 3.0422e-01 1.0000e+00 insignificant 1.0234e-02 9.8451e-01 weaklyHypermeth 5.6768e-01 1.00000000 insignificant 0.1333400 1.1022e-01 lowCoverage 1.00000000 lowCoverage 0.8599853 0.9068323 -0.04676600 5 0.862371 0.9085334 -0.0461619 9.8049e-01 2.4770e-02 weaklyHypometh 1.0000e+00 0.95268577 insignificant 9.7553e-01 3.4729e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.09038645 5.0695e-02 lowCoverage 1.0000000 lowCoverage 0.8725762 0.754476 0.0924245 5 0.793014 0.659995 0.13301903 5.9833e-04 9.9900e-01 weaklyHypermeth 3.1491e-02 1.0000e+00 weaklyHypermeth 6.6712e-04 1.0000e+00 weaklyHypermeth 5.5593e-02 1.0000000 weaklyHypermeth 0.1952327 3.2065e-02 lowCoverage 1.0000000 lowCoverage 0.8744770 0.9068323 -0.0321836 5 0.876887 0.9085334 -3.1646e-02 8.7717e-01 0.0640470 insignificant 1.0000e+00 1.00000 insignificant 7.8483e-01 0.2938248 insignificant 1.00000000 1 insignificant -0.0284938 4.8976e-01 lowCoverage 1.000000 lowCoverage 0.769437 0.9068323 -0.1256114 5 0.790660 0.9085334 -0.1178731 0.99837615 1.7969e-04 weaklyHypometh 1.00000 8.9846e-03 weaklyHypometh 9.9927e-01 1.6754e-03 weaklyHypometh 1.000000 1.1170e-01 insignificant -0.2237265 0.01929669 lowCoverage 1.00000 lowCoverage chr2 189776189 189777189 9434 COL5A2 ENSG00000204262 0.7905144 326 7 0.6477237 110 7 0.668397 141 7 0.7979552 148 7 0.7652015 54 5 0.826537 640 7 0.735337 133 7 0.717342 78 6 0.6125917 73 7 0.8510572 109 7 0.7671623 192 7 0.7774904 72 7 0.8851819 96 6 NA 0 0 0.7868293 108 7 0.8423077 68 7 0.750580 89 7 0.7145909 167 7 0.783410 208 7 0.7894207 504 7 0.753933 78 5 0.725549 79 7 0.844268 119 7 0.7545418 71 6 0.850903 90 7 0.7600818 179 7 0.897665 102 4 0.880220 82 6 0.6671769 81 7 0.681832 151 7 0.8210107 174 7 0.7559297 338 7 0.7005940 114 6 0.717109 86 7 0.640628 131 7 0.867090 106 7 0.716715 120 7 0.5802892 170 7 0.8014756 466 7 0.7783069 237 7 0.84861342 216 7 0.8065730 284 7 0.806127 266 7 0.7853470 0.6716459 0.6781543 0.7901805 0.7904930 0.8057205 0.7117655 0.7390030 0.6882886 0.8546109 0.7769178 0.7361626 0.8559400 NA 0.7909485 0.8615588 0.7550187 0.7043888 0.7967113 0.7963038 0.735064 0.6914092 0.819770 0.774727 0.8038732 0.7673232 0.8568381 0.8446009 0.689997 0.6889827 0.8368749 0.7507843 0.6324020 0.7426656 0.62265258 0.81255074 0.698472 0.6254733 0.7815134 0.7828449 0.8740679 0.8200695 0.8078069 5 0.7813631 0.7739637 0.00906034 7 0.776488 0.775085 0.00140217 0.365029 0.69125735 insignificant 1 1.00000 insignificant 0.843845 0.3829906 insignificant 1 1.00000 insignificant -0.0190946 0.48605927 insignificant 1.00000 insignificant 0.7813631 0.674003 0.1080947 7 0.776488 0.678685 0.0978031 9.4462e-09 9.9851e-01 weaklyHypermeth 8.5875e-07 1.0000e+00 weaklyHypermeth 3.4742e-03 9.6836e-01 weaklyHypermeth 2.4816e-01 1.00000000 insignificant 0.0599272 2.0194e-01 insignificant 1.00000000 insignificant 0.7813631 0.8236896 -0.03163809 7 0.776488 0.8111999 -0.0347123 9.7445e-01 8.4544e-03 weaklyHypometh 1.0000e+00 0.49731558 insignificant 9.7438e-01 4.9882e-03 weaklyHypometh 1.0000e+00 0.383711 insignificant -0.04455439 3.4723e-02 weaklyHypometh 1.0000000 insignificant 0.7739637 0.674003 0.1013864 7 0.775085 0.678685 0.09640090 1.0416e-04 9.9988e-01 weaklyHypermeth 6.5098e-03 1.0000e+00 weaklyHypermeth 1.3087e-02 9.9899e-01 weaklyHypermeth 5.4528e-01 1.0000000 insignificant 0.0790218 1.1547e-01 insignificant 1.0000000 insignificant 0.7739637 0.8236896 -0.0394155 7 0.775085 0.8111999 -3.6114e-02 9.7813e-01 0.0137334 weaklyHypometh 1.0000e+00 1.00000 insignificant 9.6038e-01 0.0402373 weaklyHypometh 1.00000000 1 insignificant -0.0254598 3.1559e-01 insignificant 1.000000 insignificant 0.674003 0.8236896 -0.1411808 7 0.678685 0.8111999 -0.1325154 0.99999627 3.8454e-07 weaklyHypometh 1.00000 4.8067e-05 weaklyHypometh 9.9983e-01 1.3852e-04 weaklyHypometh 1.000000 1.7315e-02 weaklyHypometh -0.1044816 0.04432692 weaklyHypometh 1.00000 insignificant chr2 201368589 201369589 9702 ENSG00000201737 0.9035036 440 15 0.7837607 115 7 0.506684 89 7 0.8482814 393 15 0.7969697 41 4 0.815784 326 13 0.640556 81 6 0.805144 119 12 0.7848485 63 5 0.7430403 69 7 0.7770901 243 11 0.9675741 66 5 0.8149351 84 6 NA 0 0 0.9103968 88 9 0.9479167 29 4 0.857143 72 6 0.8848464 447 15 0.915920 114 13 0.7936225 296 14 0.844643 45 3 0.602035 106 8 0.852224 220 15 0.8526786 49 6 0.955357 78 8 0.7832345 189 13 0.962576 78 8 0.761905 20 2 0.9459325 106 7 0.848005 164 13 0.8372148 221 14 0.7792461 411 14 0.7737206 106 11 0.903333 100 10 0.864750 232 14 0.773395 77 9 0.650427 51 4 0.7993836 167 13 0.9009047 330 15 0.8053757 457 15 0.91806487 446 15 0.9250231 307 15 0.896041 440 15 0.8981812 0.7662691 0.8003012 0.8787982 0.8945148 0.8801083 0.7507911 0.8779174 0.8278481 0.8619604 0.9506724 0.9472835 0.8935079 NA 0.9593882 0.9219123 0.8451627 0.8705117 0.9256639 0.8173138 0.825158 0.8212094 0.888210 0.860990 0.9534810 0.8110172 0.9202148 0.8270463 0.927655 0.9370476 0.8825285 0.8509883 0.7591373 0.8994726 0.86399360 0.75658484 0.746138 0.8158769 0.9623369 0.9183760 0.9617086 0.9213575 0.9062150 2 0.8623622 0.8582444 -0.00096815 13 0.834968 0.743495 0.09147281 0.700532 0.83396448 insignificant 1 1.00000 insignificant 0.825043 0.7007020 insignificant 1 1.00000 insignificant -0.0197358 0.60812721 insignificant 1.00000 insignificant 0.8622754 0.808743 0.0441050 13 0.824653 0.801579 0.0230742 1.1841e-02 9.7011e-01 weaklyHypermeth 3.2893e-01 1.0000e+00 insignificant 4.7208e-02 9.0490e-01 weaklyHypermeth 1.0000e+00 1.00000000 insignificant 0.0215169 6.3168e-01 insignificant 1.00000000 insignificant 0.8623622 0.9242041 -0.05889215 14 0.834968 0.8614126 -0.0264447 1.0000e+00 3.8819e-03 weaklyHypometh 1.0000e+00 0.32349443 insignificant 9.9627e-01 4.7489e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.07339678 4.0815e-02 weaklyHypometh 1.0000000 insignificant 0.8588375 0.809004 0.0415361 13 0.802319 0.813251 -0.01093234 9.4390e-03 9.6269e-01 weaklyHypermeth 2.3597e-01 1.0000e+00 insignificant 2.4424e-02 9.8053e-01 weaklyHypermeth 8.4221e-01 1.0000000 insignificant 0.0412527 3.8769e-01 insignificant 1.0000000 insignificant 0.8583284 0.9237374 -0.0548411 13 0.757745 0.8135563 -5.5811e-02 9.9999e-01 0.0105521 weaklyHypometh 1.0000e+00 0.95928 insignificant 9.9669e-01 0.1745840 insignificant 1.00000000 1 insignificant -0.0536609 1.5752e-01 insignificant 1.000000 insignificant 0.809004 0.9242041 -0.0977947 13 0.813251 0.8614126 -0.0481616 0.99999998 8.9415e-06 weaklyHypometh 1.00000 6.8781e-04 weaklyHypometh 9.9980e-01 3.7364e-03 weaklyHypometh 1.000000 2.1979e-01 insignificant -0.0949136 0.05293127 insignificant 1.00000 insignificant chr2 202006489 202007489 9722 ENSG00000202008 0.7214101 410 15 0.7319839 272 11 0.658882 230 15 0.7301985 364 15 0.7118559 144 10 0.725558 529 15 0.588493 226 12 0.627971 187 14 0.6214935 149 14 0.6786684 155 14 0.7493730 457 15 0.6990455 153 14 0.7115130 263 15 0.7400000 35 5 0.7426984 226 15 0.7185185 102 8 0.698560 136 10 0.7359690 356 15 0.700302 264 15 0.7193889 480 15 0.783189 81 10 0.684137 167 14 0.702486 298 15 0.7185516 129 12 0.732117 147 14 0.6755654 424 15 0.753225 163 13 0.715126 81 9 0.7112402 253 14 0.724853 366 15 0.7626381 301 15 0.7487403 604 15 0.7182491 282 15 0.766035 235 15 0.629745 345 15 0.723273 73 6 0.595372 141 13 0.6686864 346 17 0.7176813 461 14 0.7127615 467 14 0.75001417 363 15 0.6736436 336 14 0.722678 399 15 0.7664063 0.7599543 0.6774648 0.7535634 0.7541465 0.7635748 0.6552404 0.6719519 0.6597444 0.7180505 0.7674620 0.7136922 0.7575002 0.7447065 0.7834807 0.7624348 0.7249073 0.7688973 0.7465079 0.7547605 0.785493 0.7366715 0.733298 0.720962 0.7945210 0.7383854 0.7587516 0.7988144 0.783391 0.7466724 0.7253331 0.7460176 0.7110891 0.7175982 0.62950141 0.74102075 0.670381 0.6710705 0.7421784 0.7645842 0.7581694 0.7199929 0.7631409 7 0.7253795 0.7428666 -0.01455630 15 0.704901 0.734454 -0.02955311 0.961917 0.07133161 insignificant 1 1.00000 insignificant 0.987900 0.0469889 weaklyHypometh 1 1.00000 insignificant -0.0253949 0.07002597 insignificant 1.00000 insignificant 0.7253795 0.702532 0.0391302 15 0.704901 0.689251 0.0156498 1.7039e-05 6.8818e-01 weaklyHypermeth 1.0023e-03 1.0000e+00 weaklyHypermeth 1.3439e-02 8.1077e-01 weaklyHypermeth 5.8430e-01 1.00000000 insignificant 0.0170342 5.6268e-01 insignificant 1.00000000 insignificant 0.7253795 0.7152024 -0.00203119 15 0.704901 0.7508340 -0.0459328 4.0160e-01 1.3276e-01 insignificant 1.0000e+00 1.00000000 insignificant 7.0110e-01 9.5530e-02 insignificant 1.0000e+00 1.000000 insignificant -0.01476164 3.7069e-01 insignificant 1.0000000 insignificant 0.7428666 0.702532 0.0527544 15 0.734454 0.689251 0.04520295 8.4315e-04 9.9223e-01 weaklyHypermeth 3.8325e-02 1.0000e+00 weaklyHypermeth 8.8336e-03 9.8318e-01 weaklyHypermeth 4.1000e-01 1.0000000 insignificant 0.0424291 1.7430e-01 insignificant 1.0000000 insignificant 0.7428666 0.7152024 0.0146469 15 0.734454 0.7508340 -1.6380e-02 3.0604e-01 0.3236920 insignificant 1.0000e+00 1.00000 insignificant 3.8504e-01 0.6527998 insignificant 1.00000000 1 insignificant 0.0106333 5.0574e-01 insignificant 1.000000 insignificant 0.702532 0.7152024 -0.0393246 15 0.689251 0.7508340 -0.0615826 0.78325785 3.8724e-04 weaklyHypometh 1.00000 1.7602e-02 weaklyHypometh 9.1790e-01 5.0145e-03 weaklyHypometh 1.000000 2.7322e-01 insignificant -0.0317959 0.30691861 insignificant 1.00000 insignificant chr2 202959789 202960789 9743 BMPR2 ENSG00000204217 0.7097445 199 7 0.5309090 154 7 0.521565 108 7 0.6787974 148 7 0.3826299 91 7 0.641199 406 7 0.571995 112 7 0.557260 145 7 0.6056061 148 7 0.6440167 82 7 0.6549251 199 7 0.4015873 60 5 0.5584309 153 7 0.5416667 20 2 0.6509341 149 7 0.5286713 94 4 0.529040 49 4 0.6962868 174 7 0.632863 202 7 0.6321780 277 7 0.614903 80 7 0.626134 77 7 0.602700 148 7 0.4910173 59 5 0.614673 67 7 0.5300977 222 7 0.578806 115 7 0.513889 43 3 0.4735604 150 7 0.639611 242 7 0.6692582 216 7 0.6974323 363 7 0.5287123 136 7 0.530323 89 7 0.673147 162 7 0.514957 64 5 0.546636 106 7 0.6008373 216 7 0.6832200 141 7 0.5810891 151 7 0.64265709 136 7 0.6934252 158 5 0.687650 187 7 0.7265721 0.5352974 0.4567077 0.7102199 0.5006122 0.6878873 0.6274115 0.6406263 0.5863344 0.6959416 0.6287108 0.5600397 0.5867931 0.5731382 0.6502102 0.6005062 0.6239911 0.6347011 0.6231043 0.6612766 0.698251 0.6566681 0.639484 0.596203 0.6418877 0.5267954 0.5683462 0.5205357 0.602256 0.6623606 0.7113356 0.7022412 0.5650258 0.5098196 0.70417016 0.54527726 0.558973 0.5898444 0.7100879 0.6524507 0.6663406 0.7476880 0.7209741 5 0.6259259 0.6548822 -0.01401765 7 0.641336 0.592457 0.04887898 0.673821 0.45003390 insignificant 1 1.00000 insignificant 0.644488 0.5548313 insignificant 1 1.00000 insignificant -0.0041581 0.88522417 insignificant 1.00000 insignificant 0.6259259 0.593790 0.0490484 7 0.641336 0.636800 0.0045363 1.2664e-02 9.6359e-01 weaklyHypermeth 3.4227e-01 1.0000e+00 insignificant 3.1415e-02 9.6637e-01 weaklyHypermeth 1.0000e+00 1.00000000 insignificant 0.0177466 5.8543e-01 insignificant 1.00000000 insignificant 0.6255908 0.6985770 -0.07099688 7 0.596004 0.6610985 -0.0650949 9.9584e-01 3.3712e-03 weaklyHypometh 1.0000e+00 0.32349443 insignificant 9.9184e-01 2.9656e-03 weaklyHypometh 1.0000e+00 0.320760 insignificant -0.07409290 2.4818e-02 weaklyHypometh 0.9397383 insignificant 0.6548822 0.593790 0.0635568 7 0.592457 0.636800 -0.04434268 1.6192e-03 9.1302e-01 weaklyHypermeth 6.2279e-02 1.0000e+00 weaklyHypermeth 1.3880e-02 9.5016e-01 weaklyHypermeth 5.5521e-01 1.0000000 insignificant 0.0219047 5.0891e-01 insignificant 1.0000000 insignificant 0.6553864 0.6985770 -0.0524391 7 0.608669 0.6610985 -5.2429e-02 9.9208e-01 0.0283606 weaklyHypometh 1.0000e+00 1.00000 insignificant 9.9344e-01 0.0075897 weaklyHypometh 1.00000000 1 insignificant -0.0699348 3.6154e-02 weaklyHypometh 1.000000 insignificant 0.591678 0.6985770 -0.1130593 7 0.533028 0.6610985 -0.1280702 0.99998976 8.0239e-07 weaklyHypometh 1.00000 8.0239e-05 weaklyHypometh 1.0000e+00 2.4660e-05 weaklyHypometh 1.000000 4.1100e-03 weaklyHypometh -0.0918395 0.01993993 weaklyHypometh 1.00000 insignificant chr2 204929989 204930989 9762 ICOS ENSG00000163600 0.7334809 163 4 0.8366173 165 6 0.904672 93 4 0.6561855 132 6 0.9333333 38 4 0.897757 153 6 0.813725 72 4 0.750059 96 6 0.9054041 65 3 0.8697386 71 3 0.9156680 112 6 0.6726190 19 3 0.9008547 73 2 1.0000000 5 0 0.6883117 61 3 0.9600000 14 2 0.850000 20 2 0.8892263 106 3 0.946263 95 3 0.7764353 128 4 0.725000 12 1 0.909091 13 1 0.923333 76 4 0.8055556 23 2 0.703307 63 5 0.8957220 218 6 0.805556 34 3 1.000000 11 1 0.9143605 130 6 0.925437 183 6 0.9055236 241 6 0.9077295 189 4 0.8603466 171 6 0.860833 79 6 0.842204 59 3 0.526496 73 6 0.964286 59 6 0.4031546 266 6 0.6017224 153 6 0.7238886 189 6 0.74331925 141 4 0.8709773 117 3 0.733961 169 6 0.7961700 0.8680076 0.8565891 0.8924132 0.9147287 0.9014341 0.7547065 0.8332999 0.8211597 0.8545554 0.8786757 0.8611047 0.8552972 0.8732492 0.8554817 0.9488372 0.8784912 0.8358963 0.8854129 0.9018557 0.788372 0.8350951 0.893953 0.643411 0.8073090 0.8606794 0.9302326 1.0000000 0.866988 0.8711760 0.8598311 0.8573643 0.7643211 0.7451163 0.79584392 0.69719738 0.949612 0.7458823 0.8258948 0.8271669 0.7691936 0.8468465 0.8564905 1 0.8423557 0.8566639 -0.00697012 4 0.768311 0.792846 -0.02453556 0.985627 0.31775798 lowCoverage 1 1.00000 lowCoverage 0.965118 0.7921705 lowCoverage 1 1.00000 lowCoverage -0.0233670 0.49979382 lowCoverage 1.00000 lowCoverage 0.8437686 0.697313 0.1265160 4 0.844971 0.688920 0.1560510 1.6198e-05 9.9968e-01 lowCoverage 1.0023e-03 1.0000e+00 lowCoverage 3.6068e-02 9.9744e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 0.1021309 3.2077e-01 lowCoverage 1.00000000 lowCoverage 0.8437686 0.7841352 0.06814294 4 0.844971 0.7272789 0.1176922 4.1261e-07 7.6217e-01 lowCoverage 1.0315e-04 1.00000000 lowCoverage 5.3753e-04 9.0434e-01 lowCoverage 1.0751e-01 1.000000 lowCoverage 0.11024381 5.9554e-02 lowCoverage 1.0000000 lowCoverage 0.8585859 0.697313 0.1554521 6 0.876517 0.688920 0.18759675 5.4976e-05 9.9973e-01 weaklyHypermeth 3.9269e-03 1.0000e+00 weaklyHypermeth 4.7277e-02 9.9674e-01 weaklyHypermeth 1.0000e+00 1.0000000 insignificant 0.1254980 2.3447e-01 lowCoverage 1.0000000 lowCoverage 0.8585859 0.7841352 0.0894684 4 0.876517 0.7272789 1.4924e-01 1.0137e-08 0.8162081 lowCoverage 5.0687e-06 1.00000 lowCoverage 4.8105e-04 0.9774246 lowCoverage 0.11607464 1 lowCoverage 0.1336108 3.1098e-02 lowCoverage 1.000000 lowCoverage 0.697313 0.7841352 -0.0540428 4 0.688920 0.7272789 -0.0383588 0.91793555 7.7380e-02 lowCoverage 1.00000 1.0000e+00 lowCoverage 5.2492e-01 4.3017e-01 lowCoverage 1.000000 1.0000e+00 lowCoverage 0.0081129 0.93796577 insignificant 1.00000 insignificant chr2 207883189 207884189 9808 ENSG00000215942 0.7999276 397 7 0.7084872 238 7 0.664175 252 6 0.8230200 469 7 0.7482120 128 5 0.947371 298 6 0.851569 189 6 0.735217 328 6 0.7107951 290 5 0.7439432 263 5 0.8472934 263 7 0.6667840 134 5 0.7511732 252 7 0.7411252 191 6 0.8462110 326 6 0.7686148 180 6 0.821429 34 4 0.7930917 493 5 0.864898 213 5 0.8167777 228 6 0.816327 46 6 0.695462 137 6 0.847340 175 6 0.7209596 53 5 0.891667 101 6 0.8254187 388 7 0.686635 175 6 0.821391 153 5 0.8208148 214 6 0.829303 380 7 0.7875900 225 6 0.8281190 322 7 0.5332153 144 7 0.621429 104 6 0.323211 246 6 0.500000 40 4 0.546391 166 7 0.4798846 300 6 0.6670517 450 7 0.6906751 315 7 0.68762057 425 7 0.6295508 327 5 0.664271 386 7 0.7551335 0.7226329 0.6115094 0.7849559 0.7747387 0.9181113 0.8301392 0.7908449 0.7990843 0.8517782 0.8353349 0.7895496 0.7320668 0.8344269 0.7902805 0.8650372 0.8286872 0.7056404 0.8453226 0.7891370 0.787598 0.6278157 0.851803 0.627040 0.8553077 0.8487295 0.7044588 0.8099577 0.818101 0.8038737 0.8186032 0.7599663 0.4431482 0.7392465 0.22075598 0.40046154 0.560688 0.3060788 0.5267937 0.6385452 0.6569747 0.6425331 0.5806180 5 0.7831978 0.7969607 -0.01213467 6 0.791047 0.817696 -0.02664954 0.966704 0.15785184 insignificant 1 1.00000 insignificant 0.665747 0.5496579 insignificant 1 1.00000 insignificant -0.0150797 0.54074586 insignificant 1.00000 insignificant 0.7831978 0.404000 0.3809991 6 0.791047 0.462810 0.3282365 6.8535e-26 9.9999e-01 hypermethylated 2.2845e-23 1.0000e+00 hypermethylated 3.0783e-10 9.9997e-01 hypermethylated 7.6957e-08 1.00000000 hypermethylated 0.2818173 4.4097e-04 hypermethylated 0.05818571 hypermethylated 0.7831978 0.6104101 0.17574359 6 0.791047 0.6688280 0.1222189 4.2412e-13 9.8725e-01 weaklyHypermeth 4.2412e-10 1.00000000 weaklyHypermeth 3.8720e-09 9.9891e-01 weaklyHypermeth 3.8720e-06 1.000000 weaklyHypermeth 0.11467202 8.6242e-06 weaklyHypermeth 0.0086242 weaklyHypermeth 0.7969607 0.404000 0.3998532 6 0.817696 0.462810 0.35488600 2.9145e-18 1.0000e+00 hypermethylated 5.8289e-16 1.0000e+00 hypermethylated 7.0639e-09 1.0000e+00 hypermethylated 1.7660e-06 1.0000000 hypermethylated 0.2968971 2.7245e-04 hypermethylated 0.0340560 hypermethylated 0.7969607 0.6104101 0.1838463 6 0.817696 0.6688280 1.4887e-01 3.3068e-12 0.9999971 weaklyHypermeth 3.3068e-09 1.00000 weaklyHypermeth 2.5517e-07 0.9999910 weaklyHypermeth 0.00025517 1 weaklyHypermeth 0.1297518 2.0839e-05 weaklyHypermeth 0.020839 weaklyHypermeth 0.404000 0.6104101 -0.2121223 6 0.462810 0.6688280 -0.2060176 0.98592169 6.6065e-05 hypomethylated 1.00000 3.6703e-03 hypomethylated 9.9803e-01 1.4113e-03 weaklyHypometh 1.000000 1.0856e-01 insignificant -0.1671453 0.00816113 weaklyHypometh 0.66823 insignificant chr2 208351789 208352789 9840 FZD5 ENSG00000163251 0.5320477 412 9 0.4393404 185 9 0.405026 73 7 0.5608522 265 9 0.5488413 108 10 0.631983 182 8 0.318079 132 8 0.565733 133 7 0.5981209 79 7 0.6357143 58 7 0.4972244 238 7 0.3692681 42 5 0.4612500 107 9 0.4487723 87 10 0.5449396 79 6 0.5184524 33 4 0.678629 1474 3 0.6586056 294 9 0.438889 74 7 0.5042125 123 7 0.381481 46 5 0.642857 23 3 0.448885 290 9 0.5736111 46 4 0.593355 96 5 0.6666040 124 7 0.546742 72 6 0.710000 20 2 0.4883333 131 7 0.659139 128 9 0.4184848 116 7 0.4664277 144 7 0.3943231 148 6 0.422426 147 7 0.606489 140 8 0.555556 33 3 0.385911 97 7 0.3321429 101 6 0.5618940 424 9 0.5775121 358 9 0.56389148 383 9 0.6486631 306 9 0.632724 335 9 0.4981553 0.4729787 0.3218840 0.5498138 0.5597121 0.5431046 0.3616365 0.5210331 0.6348974 0.6083177 0.5689760 0.4263681 0.5664474 0.5532859 0.5020143 0.3872180 0.5326049 0.5720626 0.4853801 0.5293643 0.442717 0.5525851 0.498521 0.606689 0.5328289 0.5631077 0.5594237 0.6144366 0.471852 0.6342033 0.4258772 0.4766117 0.4841231 0.3808391 0.42373865 0.52741228 0.362782 0.4057331 0.4541527 0.5078568 0.5179523 0.5320439 0.4788557 3 0.5519387 0.5412621 0.01023223 7 0.546519 0.583646 -0.03712688 0.768732 0.90221139 insignificant 1 1.00000 insignificant 0.940052 0.6564010 insignificant 1 1.00000 insignificant -0.0318610 0.41233385 insignificant 1.00000 insignificant 0.5516663 0.469970 0.0967629 7 0.483449 0.439887 0.0435622 9.8902e-05 5.2876e-01 weaklyHypermeth 4.4956e-03 1.0000e+00 weaklyHypermeth 1.1335e-02 8.8811e-01 weaklyHypermeth 5.6768e-01 1.00000000 insignificant 0.0683244 2.0152e-01 insignificant 1.00000000 insignificant 0.5519885 0.5276855 0.01488588 7 0.526495 0.5512994 -0.0248046 7.9744e-01 1.0719e-01 insignificant 1.0000e+00 1.00000000 insignificant 8.7194e-01 5.5078e-02 insignificant 1.0000e+00 1.000000 insignificant -0.07913787 1.3000e-02 weaklyHypometh 0.7903787 insignificant 0.5397727 0.469970 0.0794720 7 0.470095 0.439887 0.03020857 6.5261e-03 7.5208e-01 weaklyHypermeth 1.7638e-01 1.0000e+00 insignificant 1.8191e-02 9.7918e-01 weaklyHypermeth 6.7374e-01 1.0000000 insignificant 0.1001855 9.1539e-02 insignificant 1.0000000 insignificant 0.5401460 0.5276855 -0.0234386 7 0.514254 0.5512994 -3.7046e-02 9.8352e-01 0.0527318 insignificant 1.0000e+00 1.00000 insignificant 8.6240e-01 0.2021066 insignificant 1.00000000 1 insignificant -0.0472768 2.1102e-01 insignificant 1.000000 insignificant 0.469970 0.5279778 -0.0948351 7 0.439887 0.6014175 -0.1615309 0.99881577 2.3207e-04 weaklyHypometh 1.00000 1.1051e-02 weaklyHypometh 9.8552e-01 2.8567e-03 weaklyHypometh 1.000000 1.7854e-01 insignificant -0.1474623 0.01829953 weaklyHypometh 1.00000 insignificant chr2 208402489 208403489 9848 ENSG00000188519 0.5313942 329 6 0.5614409 192 6 0.537012 149 6 0.5134163 297 6 0.5243735 107 6 0.491158 581 7 0.404594 146 6 0.619404 186 6 0.4592325 136 6 0.5337582 104 5 0.5120184 296 6 0.6788311 83 5 0.6043318 133 6 0.6400966 52 3 0.5352332 189 6 0.2321429 43 4 0.467460 59 5 0.5189708 282 6 0.581996 231 6 0.5076842 419 7 0.504220 78 6 0.561794 139 5 0.491371 213 6 0.5240463 128 5 0.544312 45 2 0.5177589 190 6 0.499208 137 6 0.391655 81 5 0.5246859 215 6 0.568225 210 6 0.5656423 333 6 0.5317964 480 6 0.4728633 210 6 0.496543 130 6 0.505706 206 6 0.600000 39 4 0.523729 152 7 0.5881845 355 6 0.5041172 287 6 0.4950380 319 6 0.60688333 243 6 0.5582199 237 6 0.574008 291 6 0.5263756 0.5207397 0.4687765 0.5280428 0.5437381 0.5102898 0.4263544 0.5481047 0.4734578 0.5729320 0.5303094 0.5376699 0.5846579 0.5626091 0.5243067 0.4839627 0.4720945 0.5187989 0.5390605 0.5317397 0.548818 0.5223957 0.547174 0.533082 0.5404914 0.5509530 0.5189798 0.4279047 0.483566 0.5310726 0.5063944 0.5086091 0.4070118 0.4211728 0.51018904 0.57112527 0.516482 0.5417997 0.5108599 0.5650569 0.5842815 0.5390341 0.5526185 5 0.5298954 0.5224544 -0.00161779 6 0.527247 0.532763 -0.00551642 0.283731 0.21088455 insignificant 1 1.00000 insignificant 0.253816 0.1671135 insignificant 1 1.00000 insignificant 0.0040013 0.87413691 insignificant 1.00000 insignificant 0.5298954 0.494505 0.0275368 6 0.527247 0.521335 0.0059113 2.6068e-01 9.2349e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.1844e-01 9.0191e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0084434 7.7983e-01 insignificant 1.00000000 insignificant 0.5298954 0.5729847 -0.03672450 6 0.527247 0.5665931 -0.0393463 9.3918e-01 2.6958e-02 weaklyHypometh 1.0000e+00 0.99844948 insignificant 8.1464e-01 1.3197e-02 weaklyHypometh 1.0000e+00 0.814074 insignificant -0.02492588 4.1784e-01 insignificant 1.0000000 insignificant 0.5224544 0.494505 0.0283525 6 0.532763 0.521335 0.01142774 9.4789e-02 6.3544e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.6232e-01 6.8860e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0124447 6.3184e-01 insignificant 1.0000000 insignificant 0.5224544 0.5729847 -0.0332148 6 0.532763 0.5665931 -3.3830e-02 9.5046e-01 0.0576108 insignificant 1.0000e+00 1.00000 insignificant 8.9209e-01 0.0778507 insignificant 1.00000000 1 insignificant -0.0289272 2.8678e-01 insignificant 1.000000 insignificant 0.494505 0.5729847 -0.0600124 6 0.521335 0.5665931 -0.0452576 0.97709025 2.0885e-02 weaklyHypometh 1.00000 4.7467e-01 insignificant 9.6345e-01 2.6606e-01 insignificant 1.000000 1.0000e+00 insignificant -0.0164825 0.59464185 insignificant 1.00000 insignificant chr2 213476689 213477689 9896 ENSG00000221388 0.8492254 303 8 0.7961535 189 8 0.642224 145 8 0.8162619 210 8 0.7806593 98 8 0.771611 453 8 0.769691 127 7 0.757459 202 8 0.6371478 120 8 0.8741990 142 8 0.8597810 264 8 0.7066667 88 8 0.8419795 213 8 0.8038462 36 4 0.8504116 124 8 0.7588357 74 6 0.722944 79 7 0.8317434 197 8 0.762202 224 8 0.7598878 306 8 0.845714 103 7 0.742400 142 8 0.757573 172 8 0.7672209 177 8 0.776220 126 7 0.7926721 247 8 0.784668 204 8 0.745118 89 6 0.8305450 150 8 0.772860 222 8 0.8112555 191 8 0.7760407 281 8 0.7665270 176 8 0.630517 133 8 0.756173 153 8 0.652131 171 5 0.738932 124 8 0.7708286 237 8 0.8249609 282 8 0.8723845 271 8 0.83311707 168 8 0.8124175 235 8 0.839711 264 8 0.8784037 0.8243397 0.7990260 0.8635529 0.7646819 0.7954776 0.7636164 0.7524673 0.7001199 0.8432861 0.8765788 0.7940351 0.8674445 0.8247848 0.8584253 0.7429925 0.7678492 0.8237110 0.8017231 0.7651939 0.829574 0.7790818 0.803805 0.754541 0.7542560 0.8270437 0.7712430 0.8314815 0.833389 0.8046501 0.8724875 0.8087217 0.7869873 0.7000962 0.81463872 0.65096249 0.789277 0.7969762 0.8620118 0.8971583 0.8778138 0.8688837 0.8680528 5 0.8099610 0.8013308 0.01017261 8 0.804305 0.788894 0.01541135 0.141881 0.55974808 insignificant 1 1.00000 insignificant 0.408504 0.5899226 insignificant 1 1.00000 insignificant -0.0038775 0.82588206 insignificant 1.00000 insignificant 0.8101089 0.732394 0.0773389 8 0.808437 0.689473 0.1189641 8.4075e-04 9.9999e-01 weaklyHypermeth 3.2337e-02 1.0000e+00 weaklyHypermeth 2.3165e-02 9.9988e-01 weaklyHypermeth 7.9878e-01 1.00000000 insignificant 0.0604616 6.9216e-02 insignificant 1.00000000 insignificant 0.8101089 0.8836066 -0.06371547 8 0.808437 0.8547185 -0.0462817 9.9989e-01 1.2624e-03 weaklyHypometh 1.0000e+00 0.15780609 insignificant 9.9972e-01 1.3201e-03 weaklyHypometh 1.0000e+00 0.263931 insignificant -0.05687170 4.7230e-03 weaklyHypometh 0.4178740 insignificant 0.8010521 0.732394 0.0669749 8 0.778093 0.689473 0.08862006 1.5817e-03 9.9992e-01 weaklyHypermeth 6.2279e-02 1.0000e+00 weaklyHypermeth 2.0115e-02 9.9733e-01 weaklyHypermeth 7.1839e-01 1.0000000 insignificant 0.0643390 5.0927e-02 insignificant 1.0000000 insignificant 0.8010521 0.8836066 -0.0745530 8 0.778093 0.8547185 -7.6626e-02 9.9782e-01 0.0020695 weaklyHypometh 1.0000e+00 0.63182 insignificant 9.9901e-01 0.0075442 weaklyHypometh 1.00000000 1 insignificant -0.0529942 2.6461e-03 weaklyHypometh 0.882039 insignificant 0.732394 0.8836066 -0.1357303 8 0.689473 0.8547185 -0.1652458 0.99999988 6.9832e-06 weaklyHypometh 1.00000 5.8193e-04 weaklyHypometh 1.0000e+00 7.7658e-04 weaklyHypometh 1.000000 6.4715e-02 weaklyHypometh -0.1173333 0.00408181 weaklyHypometh 0.58312 insignificant chr2 216109689 216110689 9925 FN1 ENSG00000115414 0.6569703 210 5 0.7158335 112 5 0.574702 105 6 0.7666997 136 5 0.8206349 33 5 0.664887 301 6 0.601496 101 6 0.679960 70 5 0.5252525 70 4 0.7170290 92 4 0.7389435 165 6 0.6276709 63 4 0.7192954 109 5 NA 0 0 0.7888977 85 5 0.7310458 61 4 0.740463 58 4 0.6676340 156 5 0.679923 115 5 0.6960499 233 6 0.776551 40 5 0.786560 80 5 0.662762 140 5 0.7784091 46 5 0.648485 28 2 0.6561840 190 6 0.743590 64 6 0.851852 32 3 0.7472346 93 5 0.739357 169 6 0.7080931 171 6 0.6649813 321 6 0.5541707 119 6 0.644587 80 5 0.600482 134 6 0.653846 41 4 0.616793 40 4 0.6264781 215 6 0.8115371 168 5 0.7503134 164 5 0.66217469 135 5 0.7505818 205 5 0.703625 190 5 0.6675185 0.7053098 0.6201473 0.7989296 0.7666079 0.7061667 0.7291084 0.7140138 0.6636364 0.7699946 0.7440284 0.6977518 0.7259586 NA 0.7473681 0.8053498 0.6677670 0.7541185 0.7536776 0.7507284 0.788614 0.7961620 0.658391 0.780794 0.6775159 0.7158683 0.7117759 0.8244170 0.763730 0.7426951 0.7450116 0.7166684 0.5540796 0.6182600 0.62754353 0.66472829 0.661055 0.6508600 0.8261170 0.7953273 0.7089842 0.7725421 0.7134015 3 0.6958242 0.6950509 0.00185841 5 0.687129 0.691665 -0.00453534 0.386706 0.10442234 insignificant 1 1.00000 insignificant 0.610380 0.0138594 inconclusive 1 1.00000 insignificant -0.0401599 0.11831377 lowCoverage 1.00000 lowCoverage 0.6958242 0.604134 0.0918218 5 0.687129 0.604222 0.0829072 7.1082e-05 9.9948e-01 weaklyHypermeth 3.3849e-03 1.0000e+00 weaklyHypermeth 2.8272e-03 9.8725e-01 weaklyHypermeth 2.1748e-01 1.00000000 insignificant 0.0741188 3.7070e-03 lowCoverage 0.29904975 lowCoverage 0.6958242 0.7378190 -0.04383991 5 0.687129 0.7553383 -0.0682088 9.9702e-01 1.3439e-02 weaklyHypometh 1.0000e+00 0.70732889 insignificant 9.9038e-01 1.6313e-02 weaklyHypometh 1.0000e+00 0.906269 insignificant -0.04546795 1.7064e-01 lowCoverage 1.0000000 lowCoverage 0.6950509 0.604134 0.0891427 6 0.691665 0.604222 0.08744251 1.7345e-07 9.8688e-01 weaklyHypermeth 1.4454e-05 1.0000e+00 weaklyHypermeth 3.5296e-05 9.9708e-01 weaklyHypermeth 3.9217e-03 1.0000000 weaklyHypermeth 0.1142788 1.8372e-04 weaklyHypermeth 0.0262463 weaklyHypermeth 0.6950509 0.7378190 -0.0534184 5 0.691665 0.7553383 -6.3673e-02 9.9828e-01 0.0030383 weaklyHypometh 1.0000e+00 0.63182 insignificant 9.0714e-01 0.0735408 insignificant 1.00000000 1 insignificant -0.0053080 8.6850e-01 insignificant 1.000000 insignificant 0.604134 0.7378190 -0.1372136 5 0.604222 0.7553383 -0.1511160 0.99999941 6.1757e-07 weaklyHypometh 1.00000 6.8619e-05 weaklyHypometh 9.9993e-01 2.1333e-04 weaklyHypometh 1.000000 2.3703e-02 weaklyHypometh -0.1195868 0.00515337 weaklyHypometh 0.62455 insignificant chr2 216753789 216754789 9962 XRCC5 ENSG00000079246 0.7167800 62 5 0.7675214 166 7 0.665487 69 4 0.7482143 78 7 0.6742556 68 4 0.637262 96 7 0.544048 94 7 0.712795 108 7 0.5164769 99 4 0.6630609 63 4 0.7264744 127 7 0.5368421 69 4 0.6972356 131 5 0.2697303 82 4 0.7309833 86 4 0.6785714 24 4 0.455357 85 3 0.5187500 44 3 0.545444 69 6 0.5019481 49 4 0.772487 36 4 0.685714 25 3 0.456349 36 3 0.5663126 69 4 0.747619 75 7 0.5890909 120 7 0.620833 28 3 0.558333 26 4 0.5865554 56 4 0.688793 134 7 0.6540770 90 7 0.6981241 47 6 0.5018188 114 7 0.675071 66 7 0.530812 198 7 0.783163 43 7 0.539813 179 7 0.6305315 118 7 0.6761905 46 5 0.7165533 80 7 0.48968851 84 7 0.5742857 53 4 0.615801 70 6 0.5675737 0.6272140 0.6296667 0.5184524 0.4626105 0.5940863 0.4895558 0.5383244 0.5678612 0.6350978 0.5048858 0.5364049 0.5496428 0.4326262 0.6210848 0.6424642 0.3906635 0.4900560 0.5944993 0.4553731 0.651194 0.7165266 0.534080 0.549730 0.5930372 0.5476853 0.6938375 0.5962185 0.547578 0.5816653 0.4965588 0.5061710 0.4253590 0.5514975 0.44695054 0.58358343 0.717696 0.4521405 0.6011204 0.5723623 0.3555254 0.4441463 0.4875350 3 0.5701439 0.6361186 -0.02641287 5 0.641675 0.573671 0.06800387 0.753613 0.34295644 insignificant 1 1.00000 insignificant 0.837219 0.4667442 insignificant 1 1.00000 insignificant -0.0199956 0.60444568 lowCoverage 1.00000 lowCoverage 0.5695364 0.557880 0.0619272 5 0.666675 0.405175 0.2615007 1.4577e-01 9.9970e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.4885e-01 9.1401e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0051601 9.2302e-01 insignificant 1.00000000 insignificant 0.5685680 0.5795796 0.03036509 5 0.638108 0.6133168 0.0247907 1.2634e-01 6.9753e-01 insignificant 1.0000e+00 1.00000000 insignificant 1.7803e-01 5.8696e-01 insignificant 1.0000e+00 1.000000 insignificant 0.00085808 9.8631e-01 insignificant 1.0000000 insignificant 0.6378378 0.558659 0.0941036 7 0.637413 0.450194 0.18721873 1.9365e-03 9.9999e-01 weaklyHypermeth 7.1724e-02 1.0000e+00 weaklyHypermeth 1.4989e-01 9.3269e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0251557 6.3337e-01 lowCoverage 1.0000000 lowCoverage 0.6385870 0.5795796 0.0598709 7 0.676673 0.6133168 6.3357e-02 3.4252e-03 0.9543714 weaklyHypermeth 2.8544e-01 1.00000 insignificant 4.3875e-02 0.8564441 weaklyHypermeth 1.00000000 1 insignificant 0.0208537 6.7182e-01 lowCoverage 1.000000 lowCoverage 0.561010 0.5795796 -0.0305023 7 0.578821 0.6133168 -0.0344960 0.77884304 3.4595e-01 insignificant 1.00000 1.0000e+00 insignificant 4.8445e-01 8.7852e-01 insignificant 1.000000 1.0000e+00 insignificant -0.0043020 0.94353205 insignificant 1.00000 insignificant chr2 217264889 217265889 9986 IGFBP2 ENSG00000115457 0.0802867 461 12 0.0903494 394 13 0.034641 237 13 0.0060585 406 11 0.0043875 157 7 0.045289 461 12 0.013130 315 13 0.045975 227 12 0.0171670 339 13 0.0180967 238 13 0.0196296 288 13 0.0871490 173 13 0.0374150 213 11 0.0013228 166 11 0.0772665 256 12 0.0018797 119 8 0.000000 50 6 0.0708932 577 11 0.016667 201 7 0.0114564 459 12 0.214658 88 4 0.077606 158 11 0.017491 271 11 0.0274170 163 8 0.138489 370 11 0.0029586 372 13 0.120674 242 10 0.025737 206 11 0.0043982 241 11 0.011975 476 13 0.0105204 446 13 0.0317393 375 12 0.0068134 203 5 0.000000 174 7 0.000000 262 8 0.025000 21 1 0.069549 285 13 0.0230609 355 12 0.0151499 436 11 0.0189815 282 9 0.00077042 320 11 0.0154809 229 11 0.071429 301 11 0.0057841 0.0302198 0.0051521 0.0073873 0.0129082 0.0156251 0.0030012 0.0295526 0.0128264 0.0112601 0.0155896 0.0166579 0.0062561 0.0048658 0.0090390 0.0069146 0.0023934 0.0057208 0.0127551 0.0138496 0.119101 0.0097144 0.024503 0.033152 0.0078670 0.0015699 0.0262286 0.0180475 0.014290 0.0074055 0.0104329 0.0302058 0.0223896 0.0000000 0.00035492 0.01861858 0.032948 0.0154252 0.0067065 0.0154620 0.0017727 0.0145667 0.0000000 3 0.0129032 0.0178991 -0.00394599 12 0.081682 0.084471 -0.00278910 0.863112 0.39299201 insignificant 1 1.00000 insignificant 0.972844 0.2814652 insignificant 1 1.00000 insignificant -0.0230189 0.28413632 insignificant 1.00000 insignificant 0.0125633 0.016154 -0.0035040 12 0.032468 0.027551 0.0049167 9.0289e-01 5.2181e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.1028e-01 9.2161e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0132157 3.2744e-01 insignificant 1.00000000 insignificant 0.0127622 0.0070153 0.00410378 11 0.070130 0.0746673 -0.0045372 4.4528e-01 9.6169e-01 insignificant 1.0000e+00 1.00000000 insignificant 6.3256e-01 9.4408e-01 insignificant 1.0000e+00 1.000000 insignificant 0.00959075 5.1672e-01 insignificant 1.0000000 insignificant 0.0176211 0.016154 0.0005484 12 0.064997 0.027551 0.03744574 7.6080e-01 9.4380e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.1749e-01 9.9860e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0362346 1.2291e-01 insignificant 1.0000000 insignificant 0.0173683 0.0070153 0.0086269 11 0.073663 0.0746673 -1.0043e-03 6.1049e-01 0.9866591 insignificant 1.0000e+00 1.00000 insignificant 5.8215e-01 0.9995993 insignificant 1.00000000 1 insignificant 0.0326097 1.7566e-01 insignificant 1.000000 insignificant 0.016229 0.0070243 0.0093763 11 0.033455 0.0800007 -0.0465459 0.71479666 9.3778e-01 insignificant 1.00000 1.0000e+00 insignificant 9.6227e-01 9.8760e-01 insignificant 1.000000 1.0000e+00 insignificant -0.0036250 0.82857381 insignificant 1.00000 insignificant chr2 217722889 217723889 10017 TNP1 ENSG00000118245 0.6740667 119 7 0.561311 82 4 0.5952381 31 5 0.7203548 47 2 0.531639 119 7 0.788235 55 4 0.479135 67 5 0.571429 44 4 0.724242 54 7 0.695988 55 5 0.655973 122 7 0.6607143 32 4 0.781223 123 7 0.850794 59 7 0.6801020 56 7 0.653968 41 5 0.543290 76 3 0.5754337 126 4 0.5303571 30 4 0.461039 45 4 0.800000 6 0 0.6428571 10 0 0.7256660 72 7 0.5785714 30 2 0.7599497 80 3 0.5854342 62 4 0.681633 29 4 0.666667 16 0 0.6136101 92 5 0.606667 51 4 0.5897727 55 4 0.7440476 32 2 0.6250945 93 7 0.6190476 53 4 0.3934066 39 4 0.7142857 11 0 0.656566 45 6 0.8389805 46 4 0.645331 86 7 0.609694 102 7 0.682234 130 7 0.623757 83 5 0.669407 104 7 0.7094127 0.6214212 0.657692 0.7533937 0.6449523 0.728989 0.520491 0.6057692 0.7458042 0.8037393 0.6879926 0.7240385 0.7960304 0.8450855 0.7105769 0.687332 0.6477273 0.658056 0.6453297 0.562063 0.8115058 0.5961538 0.706774 0.5490385 0.7724829 0.6876212 0.660165 0.750000 0.674944 0.6771842 0.7022756 0.7644231 0.6401099 0.6602564 0.5023669 0.66346154 0.7501748 0.8344428 0.6483516 0.6535027 0.7177433 0.6984362 0.709783 0 0.687410 0.707865 -1.6665e-02 4 0.640896 0.583212 0.05768420 0.7852792 0.38595588 lowCoverage 1.0000 1.000000 lowCoverage 0.940761 1.8421e-01 lowCoverage 1 1.000000 lowCoverage -0.0295130 0.3688361 lowCoverage 1 lowCoverage 0.687410 0.6829268 0.02613015 4 0.640896 0.617171 0.02372472 2.2476e-01 8.9085e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.3494e-01 8.5137e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage -0.00450347 9.4616e-01 lowCoverage 1.0000e+00 lowCoverage 0.689455 0.722772 0.0047949 7 0.657342 0.654432 0.00291013 5.5277e-01 7.5243e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.2331e-01 7.0356e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.00935798 0.73550384 insignificant 1.000000 insignificant 0.709193 0.6818182 0.04290016 4 0.656113 0.569317 0.0867956 2.1765e-01 9.2025e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 4.8001e-01 0.95940048 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.02500949 7.0684e-01 lowCoverage 1.0000e+00 lowCoverage 0.709981 0.722772 0.0139027 4 0.678415 0.654432 0.0239828 5.0044e-01 8.5491e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 3.4168e-01 9.0555e-01 lowCoverage 1.00000000 1.0000000 lowCoverage 0.02015497 4.4636e-01 lowCoverage 1.000000 lowCoverage 0.6842105 0.7227723 -0.0306858 4 0.650649 0.654432 -0.0037836 8.3831e-01 2.6241e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.8860e-01 6.1375e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.00485451 9.3958e-01 lowCoverage 1.0000e+00 lowCoverage chr2 217947989 217948989 10035 TNP1 ENSG00000118245 0.7890595 118 7 0.634841 142 8 0.6494196 81 8 0.7379621 116 7 0.577839 104 8 0.717063 116 8 0.552117 101 8 0.648141 84 8 0.508557 75 7 0.555655 63 6 0.720948 333 8 0.7323718 43 4 0.551940 64 3 0.683411 70 7 0.6076389 62 8 0.653571 35 4 0.678571 26 2 0.7020661 139 7 0.7313792 83 8 0.633379 101 7 0.625000 23 1 0.8333333 20 1 0.6496753 77 8 0.7129630 72 6 0.7292999 81 7 0.6248834 159 8 0.691667 44 3 0.625000 17 1 0.7500366 101 8 0.594487 135 8 0.6994048 100 7 0.7087144 114 7 0.6936348 123 8 0.6123761 132 8 0.5702976 125 8 0.4666667 12 1 0.379365 59 6 0.6692537 144 8 0.655448 131 7 0.750726 100 8 0.782520 133 7 0.742622 88 7 0.751227 95 7 0.7806280 0.6573585 0.714466 0.7570186 0.6279989 0.704382 0.618756 0.6494088 0.6038916 0.6061425 0.7382563 0.7428140 0.5670385 0.7180809 0.5936708 0.637455 0.7392099 0.754212 0.7688760 0.660227 0.6386555 0.8431373 0.693485 0.7435574 0.7314142 0.6626804 0.726331 0.700279 0.770345 0.6367916 0.7361445 0.7153105 0.7025519 0.6410037 0.5881353 0.55299574 0.5224490 0.6709176 0.7039111 0.7717193 0.7787661 0.7710084 0.785269 1 0.699898 0.712619 -8.7988e-03 8 0.701293 0.701114 0.00017897 0.7009688 0.12401747 insignificant 1.0000 1.000000 insignificant 0.972056 5.3447e-02 insignificant 1 1.000000 insignificant -0.0337422 0.2034634 insignificant 1 insignificant 0.699898 0.6722689 0.04491252 8 0.701293 0.547047 0.15424601 6.0294e-02 9.8198e-01 insignificant 4.5678e-01 1.0000e+00 insignificant 8.1724e-02 9.9794e-01 insignificant 7.2322e-01 1.0000000 insignificant 0.08803086 1.4245e-01 insignificant 1.0000e+00 insignificant 0.699591 0.736746 -0.0678347 7 0.663954 0.739563 -0.07560833 9.9747e-01 5.2992e-03 weaklyHypometh 1.0000e+00 3.7852e-01 insignificant 9.9942e-01 4.4144e-03 weaklyHypometh 1.0000e+00 0.4740089 insignificant -0.08321192 0.01257867 weaklyHypometh 0.598984 insignificant 0.712619 0.6722689 0.05777770 8 0.701114 0.547047 0.1540670 7.8243e-03 9.7913e-01 weaklyHypermeth 6.8037e-02 1.0000000 weaklyHypermeth 1.1945e-02 0.99939763 weaklyHypermeth 1.3730e-01 1.00000 insignificant 0.12177306 5.8501e-02 insignificant 7.2953e-01 insignificant 0.712314 0.736746 -0.0677986 7 0.663753 0.739563 -0.0758097 9.0372e-01 7.1089e-04 weaklyHypometh 1.0000e+00 1.4218e-01 insignificant 9.0856e-01 2.0100e-02 weaklyHypometh 1.00000000 1.0000000 insignificant -0.04946972 1.1587e-01 insignificant 1.000000 insignificant 0.6734007 0.7367459 -0.1234290 7 0.615428 0.739563 -0.1241351 9.9991e-01 1.2002e-04 weaklyHypometh 1.0000e+00 2.2226e-03 weaklyHypometh 1.0000e+00 3.2582e-04 weaklyHypometh 1.0000e+00 1.0861e-02 weaklyHypometh -0.17124278 1.6514e-02 weaklyHypometh 2.6394e-01 insignificant chr2 218568289 218569289 10053 TNS1 ENSG00000079308 0.7987052 143 6 0.625295 304 6 0.7067414 208 6 0.7579515 126 3 0.741844 134 6 0.780809 316 6 0.859802 131 6 0.672604 206 6 0.635568 185 6 0.645953 146 6 0.840049 237 6 0.6678877 136 6 0.617390 148 6 0.622565 94 6 0.7270202 137 6 0.387937 77 3 NA 0 0 0.4673261 145 5 0.6257875 243 3 0.700696 205 6 0.831291 90 6 0.4899749 39 4 0.6277160 176 6 0.6848695 113 6 0.7261905 28 3 0.6855529 230 6 0.653740 217 6 0.646599 139 6 0.6554403 228 6 0.770830 297 6 0.7392796 258 6 0.7551916 264 6 0.0592952 313 6 0.0027778 155 4 0.1666667 236 6 0.0000000 9 0 0.025248 289 6 0.1521549 323 6 0.641624 120 6 0.698738 163 6 0.332178 105 3 0.532687 129 3 0.557609 158 3 0.7751072 0.4676397 0.604816 0.7362588 0.6344130 0.761457 0.786808 0.6393571 0.5579170 0.7627935 0.7514171 0.6360723 0.5039841 0.5726615 0.6175620 0.618745 NA 0.413852 0.5390420 0.694050 0.8095201 0.5726668 0.732872 0.5460558 0.7580267 0.6467355 0.626018 0.683541 0.652419 0.6511288 0.6267633 0.7293412 0.0293303 0.0051768 0.2045455 0.00000000 0.0319908 0.1805366 0.5662937 0.6119997 0.3787572 0.4961059 0.461049 3 0.671183 0.700241 -3.4339e-02 6 0.746987 0.743567 0.00342087 0.9743844 0.31508760 insignificant 1.0000 1.000000 insignificant 0.945833 4.6127e-01 insignificant 1 1.000000 insignificant -0.0108932 0.7678831 insignificant 1 insignificant 0.671084 0.1042296 0.55065432 6 0.710843 0.070838 0.64000525 2.0605e-46 1.0000e+00 hypermethylated 2.9436e-44 1.0000e+00 hypermethylated 2.7512e-14 1.0000e+00 hypermethylated 3.4390e-12 1.0000000 hypermethylated 0.61030593 7.8760e-10 lowCoverage 8.7511e-08 lowCoverage 0.671084 0.577778 0.0876680 3 0.710843 0.565035 0.14580776 3.7305e-04 9.9919e-01 lowCoverage 2.8696e-02 1.0000e+00 lowCoverage 9.0200e-04 9.9913e-01 lowCoverage 7.5167e-02 1.0000000 lowCoverage 0.12542916 0.11870051 lowCoverage 1.000000 lowCoverage 0.699567 0.1041509 0.58655886 6 0.660233 0.061983 0.5982504 2.8967e-41 1.0000e+00 hypermethylated 4.8278e-39 1.0000000 hypermethylated 3.5137e-12 1.00000000 hypermethylated 4.3921e-10 1.00000 hypermethylated 0.62119913 3.0850e-09 lowCoverage 4.4072e-07 lowCoverage 0.700096 0.577778 0.1249670 3 0.706933 0.565035 0.1418982 3.3871e-05 9.9985e-01 lowCoverage 3.7635e-03 1.0000e+00 lowCoverage 7.9446e-05 9.9998e-01 lowCoverage 0.01244204 1.0000000 lowCoverage 0.13632236 9.5452e-02 lowCoverage 1.000000 lowCoverage 0.1042296 0.5777778 -0.4266059 3 0.070838 0.565035 -0.4941975 1.0000e+00 1.1934e-18 lowCoverage 1.0000e+00 1.3259e-16 lowCoverage 1.0000e+00 2.5750e-08 lowCoverage 1.0000e+00 4.4347e-06 lowCoverage -0.48487677 4.8504e-04 lowCoverage 2.8532e-02 lowCoverage chr2 218906089 218907089 10065 PNKD ENSG00000127838 0.8587978 233 7 0.895908 187 4 0.7426304 155 4 0.9740260 81 5 0.798093 104 4 0.828188 147 7 0.772227 168 4 0.823691 169 7 0.768448 119 4 0.847954 136 4 0.933434 198 4 0.8135654 113 4 0.805992 173 4 NA 0 0 0.9250754 182 7 0.748809 174 7 0.799747 151 4 0.9439776 106 7 0.8117257 85 4 0.820237 148 7 0.923559 89 7 0.8641948 61 5 0.8804674 229 7 0.8722222 63 4 0.9642857 29 4 0.8566747 225 7 0.870889 122 7 0.989011 84 5 0.8571429 94 6 0.897499 245 7 0.8807724 241 7 0.9015080 224 7 0.7370590 148 4 0.4957504 145 7 0.4989936 98 3 0.7914863 49 4 0.793965 76 4 0.8236834 256 7 0.935104 189 6 0.880786 116 7 0.889286 39 3 0.825000 45 4 0.931111 115 7 0.8357423 0.8773015 0.712249 0.9478788 0.8859361 0.830941 0.859909 0.8714773 0.8728802 0.8751503 0.9330652 0.7568459 0.8267409 NA 0.9032365 0.833620 0.8954054 0.927608 0.8482916 0.822739 0.8961988 0.9069714 0.921119 0.8345926 0.8833333 0.9116915 0.885554 0.977949 0.924889 0.9284938 0.9155148 0.8833594 0.7086997 0.4555417 0.6507240 0.75471380 0.7810559 0.8491832 0.9052353 0.8443854 0.9361690 0.8754071 0.936307 2 0.863203 0.890387 -3.3194e-02 7 0.859666 0.886335 -0.02666843 0.9238200 0.01407297 weaklyHypometh 1.0000 0.639680 insignificant 0.990259 4.8176e-03 weaklyHypometh 1 0.393879 insignificant -0.0590174 0.0057434 lowCoverage 1 lowCoverage 0.863203 0.6968912 0.15748426 7 0.859666 0.718500 0.14116607 2.6466e-08 9.9744e-01 weaklyHypermeth 4.3387e-07 1.0000e+00 weaklyHypermeth 5.2521e-03 9.9591e-01 weaklyHypermeth 7.8390e-02 1.0000000 weaklyHypermeth 0.14734509 6.3474e-02 lowCoverage 8.0584e-01 lowCoverage 0.863203 0.924603 -0.0449112 7 0.859666 0.902229 -0.04256233 8.4050e-01 5.3639e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7472e-01 2.5707e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant -0.05475590 0.05734971 lowCoverage 1.000000 lowCoverage 0.890387 0.6968912 0.19084842 7 0.886335 0.718500 0.1678345 1.1542e-07 9.9984e-01 weaklyHypermeth 1.9563e-06 1.0000000 weaklyHypermeth 2.3377e-04 0.99974114 weaklyHypermeth 5.0819e-03 1.00000 weaklyHypermeth 0.20636251 2.0010e-02 lowCoverage 3.1266e-01 lowCoverage 0.890387 0.924603 -0.0240432 7 0.886335 0.902229 -0.0158939 4.6701e-01 6.5193e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 5.9175e-01 3.7460e-01 insignificant 1.00000000 1.0000000 insignificant 0.00426151 8.6092e-01 insignificant 1.000000 insignificant 0.6968912 0.9246032 -0.1838035 7 0.718500 0.902229 -0.1837284 9.9989e-01 1.1837e-03 weaklyHypometh 1.0000e+00 1.5176e-02 weaklyHypometh 1.0000e+00 1.0082e-03 weaklyHypometh 1.0000e+00 2.4004e-02 weaklyHypometh -0.20210100 2.1027e-02 lowCoverage 3.0823e-01 lowCoverage chr2 218994189 218995189 10066 VIL1 ENSG00000127831 0.4589065 125 5 0.557702 65 5 0.7333333 43 5 0.4494048 83 5 0.713997 63 7 0.731987 78 5 0.634699 63 5 0.755000 42 5 0.600000 18 1 0.677083 27 0 0.857314 60 5 0.5555556 19 0 0.520833 27 1 0.267857 34 4 0.5634921 45 5 0.654762 19 0 1.000000 1 0 0.5787138 78 6 0.6400000 31 5 0.645833 70 5 0.739583 26 1 0.7333333 13 0 0.6795136 73 7 0.5416667 31 3 0.5188452 75 5 0.8529304 74 5 0.476190 15 0 0.500000 13 0 0.7581699 30 1 0.604320 82 5 0.7278195 43 5 0.7023810 61 5 0.5367347 67 5 0.6477273 54 5 0.5250000 24 1 0.7600000 21 4 0.462868 60 7 0.4656262 57 5 0.753366 137 5 0.631944 52 5 0.527623 101 5 0.693878 39 5 0.663207 121 5 0.6080930 0.6553030 0.718310 0.6176643 0.7523119 0.736876 0.723850 0.7468310 0.5154930 0.7359155 0.7978806 0.6478873 0.4718310 0.3963783 0.6713615 0.859155 NA 0.627373 0.6197183 0.612676 0.6302817 0.7183099 0.620697 0.8591549 0.7168986 0.7551875 0.755423 0.577465 0.700083 0.8594138 0.8146775 0.6896378 0.6398390 0.7114277 0.5052817 0.74647887 0.5721831 0.6381944 0.7448368 0.7474011 0.7263996 0.5472837 0.648257 0 0.671039 0.746269 -6.6168e-02 5 0.593570 0.670695 -0.07712529 0.7251572 0.02227127 weaklyHypometh 1.0000 0.829315 insignificant 0.821654 1.3039e-01 insignificant 1 1.000000 insignificant -0.0230725 0.6433537 lowCoverage 1 lowCoverage 0.672467 0.6325088 0.03955642 5 0.601019 0.526940 0.07407862 1.5053e-03 9.2486e-01 weaklyHypermeth 1.5360e-02 1.0000e+00 weaklyHypermeth 5.6899e-03 9.5089e-01 weaklyHypermeth 8.3280e-02 1.0000000 weaklyHypermeth 0.06349755 3.0356e-01 lowCoverage 1.0000e+00 lowCoverage 0.672467 0.706667 -0.0346949 5 0.601019 0.626751 -0.02573240 6.7476e-01 4.1752e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.0936e-01 7.2034e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.02418009 0.64441238 lowCoverage 1.000000 lowCoverage 0.750000 0.6325088 0.10797990 5 0.672422 0.526940 0.1454821 3.1428e-04 9.9994e-01 weaklyHypermeth 3.6975e-03 1.0000000 weaklyHypermeth 4.3003e-03 0.99568495 weaklyHypermeth 6.0567e-02 1.00000 weaklyHypermeth 0.08657000 1.7118e-01 lowCoverage 1.0000e+00 lowCoverage 0.750000 0.706667 0.0371014 5 0.672422 0.626751 0.0456711 1.5798e-01 8.9383e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.3636e-01 9.5405e-01 insignificant 1.00000000 1.0000000 insignificant -0.00110764 9.8313e-01 lowCoverage 1.000000 lowCoverage 0.6325088 0.7066667 -0.0609052 5 0.526940 0.626751 -0.0998110 9.8447e-01 6.1261e-02 insignificant 1.0000e+00 5.0214e-01 insignificant 9.6974e-01 2.3282e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.08767764 1.8128e-01 lowCoverage 1.0000e+00 lowCoverage chr2 219468789 219469789 10079 WNT10A ENSG00000135925 0.0415241 169 4 0.042520 298 7 0.0853618 446 8 0.0195312 162 8 0.044139 485 8 0.062584 307 8 0.038427 356 8 0.053448 410 8 0.126202 320 7 0.017034 283 7 0.060358 403 8 0.0670145 175 7 0.010895 185 7 0.045669 276 7 0.0290517 384 7 0.048967 185 8 0.250000 5 0 0.0058594 163 3 0.1291779 422 8 0.122204 301 8 0.020833 155 7 0.0069264 176 7 0.1141414 169 9 0.0129928 180 7 0.0238095 102 7 0.0859921 478 8 0.154095 321 8 0.000000 202 7 0.1677902 251 7 0.025447 670 9 0.0584106 520 8 0.0251281 299 8 0.2034955 261 8 0.1261905 219 7 0.3091459 325 8 0.0666667 77 1 0.442564 173 8 0.0124006 472 9 0.017314 205 8 0.006250 164 4 0.002500 118 4 0.013889 149 4 0.058244 180 4 0.0562032 0.0075614 0.064489 0.0037425 0.0118920 0.053786 0.043530 0.0426795 0.0208928 0.0173291 0.0534615 0.0368871 0.0242224 0.0323064 0.0279072 0.037788 NA 0.019742 0.0252794 0.029255 0.0056138 0.0113885 0.023398 0.0336853 0.0156829 0.0140049 0.041411 0.000000 0.028010 0.0316948 0.0231790 0.0239532 0.0530098 0.0934559 0.2988716 0.10636182 0.4512380 0.0102106 0.0094338 0.0000000 0.0084232 0.0081319 0.051802 3 0.035222 0.024439 1.0848e-02 8 0.052200 0.055273 -0.00307324 0.0467768 0.97526064 weaklyHypermeth 1.0000 1.000000 insignificant 0.108918 9.5512e-01 insignificant 1 1.000000 insignificant 0.0070344 0.7425143 insignificant 1 insignificant 0.035222 0.1630648 -0.13721775 8 0.052200 0.175377 -0.12317691 9.9852e-01 1.6241e-08 weaklyHypometh 1.0000e+00 1.6241e-05 weaklyHypometh 9.9754e-01 1.4177e-03 weaklyHypometh 1.0000e+00 0.2835321 insignificant -0.12841218 1.0838e-01 insignificant 1.0000e+00 insignificant 0.032992 0.018382 0.0159436 4 0.035488 0.022824 0.01266403 1.5087e-02 8.8236e-01 lowCoverage 4.1909e-01 1.0000e+00 lowCoverage 7.0165e-03 9.9773e-01 lowCoverage 3.8981e-01 1.0000000 lowCoverage 0.04535894 0.01173296 lowCoverage 0.586648 lowCoverage 0.024439 0.1630648 -0.14766981 8 0.055273 0.175377 -0.1201037 9.9552e-01 2.1814e-06 weaklyHypometh 1.0000e+00 0.0021814 weaklyHypometh 9.9622e-01 0.00062911 weaklyHypometh 1.0000e+00 0.31455 insignificant -0.13544655 9.5064e-02 insignificant 9.0407e-01 insignificant 0.022714 0.018382 0.0046995 4 0.023930 0.022824 0.0011062 7.5967e-02 5.1205e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 5.3612e-02 9.6737e-01 lowCoverage 1.00000000 1.0000000 lowCoverage 0.03832457 7.0466e-02 lowCoverage 1.000000 lowCoverage 0.1581395 0.0183824 0.1266701 4 0.150471 0.022824 0.1276471 3.3035e-03 9.9740e-01 lowCoverage 6.0544e-01 1.0000e+00 lowCoverage 3.7499e-04 9.9928e-01 lowCoverage 1.8750e-01 1.0000e+00 lowCoverage 0.17377112 4.5047e-02 lowCoverage 5.2996e-01 lowCoverage chr2 220296289 220297289 10106 ENSG00000216666 0.7955385 173 5 0.626587 105 5 0.7836523 131 5 0.8873016 116 4 0.834681 168 6 0.698173 141 5 0.810101 163 5 0.775406 107 5 0.744602 136 5 0.845110 117 5 0.797552 176 5 0.7121864 117 5 0.797936 200 5 0.876603 57 5 0.8333932 145 5 0.631432 125 5 0.817345 176 5 0.7167756 121 4 0.8795371 102 5 0.713817 117 4 0.852101 56 5 0.9642857 26 4 0.8655303 127 5 0.6083333 34 3 0.7350000 38 4 0.7723494 96 5 0.848485 29 2 0.719246 33 4 0.7656396 89 5 0.809587 130 5 0.7968609 84 5 0.7344080 158 4 0.6360194 133 5 0.6118401 99 5 0.8318520 112 5 0.9062500 27 4 0.644719 73 5 0.7400167 90 5 0.868398 146 4 0.824484 181 4 0.852121 140 3 0.883601 190 4 0.889082 134 4 0.7905574 0.7861284 0.783647 0.8737060 0.8786195 0.846730 0.818292 0.7865972 0.6642463 0.8414343 0.7912412 0.7048257 0.8208924 0.8356327 0.7928822 0.758201 0.8127238 0.837436 0.8645051 0.769486 0.8960541 0.9530565 0.850749 0.7521739 0.8798913 0.7538344 0.839262 0.872541 0.861602 0.8290400 0.7893052 0.7635220 0.7556703 0.6358735 0.8313016 0.89145018 0.6496424 0.7829295 0.8211839 0.8389169 0.9017567 0.8701730 0.876534 4 0.794653 0.820000 -1.6840e-02 5 0.775033 0.783558 -0.00852460 0.8860480 0.09745976 insignificant 1.0000 1.000000 insignificant 0.877753 2.3469e-01 insignificant 1 1.000000 insignificant -0.0104323 0.7402719 lowCoverage 1 lowCoverage 0.794653 0.7434457 0.05680391 5 0.775033 0.699837 0.07519574 1.5314e-04 9.7708e-01 weaklyHypermeth 1.8676e-03 1.0000e+00 weaklyHypermeth 1.4811e-02 9.7402e-01 weaklyHypermeth 1.7424e-01 1.0000000 insignificant 0.05043700 3.6577e-01 lowCoverage 1.0000e+00 lowCoverage 0.794653 0.816688 -0.0512759 4 0.775033 0.882055 -0.10702164 9.9949e-01 1.8943e-04 lowCoverage 1.0000e+00 2.1047e-02 lowCoverage 9.9889e-01 1.4410e-04 lowCoverage 1.0000e+00 0.0240168 lowCoverage -0.08465074 0.00056355 lowCoverage 0.093924 lowCoverage 0.820000 0.7434457 0.07683787 5 0.783558 0.699837 0.0837203 1.3906e-04 9.8445e-01 weaklyHypermeth 1.7382e-03 1.0000000 weaklyHypermeth 9.4780e-03 0.99795764 weaklyHypermeth 1.1283e-01 1.00000 insignificant 0.06086932 3.0339e-01 lowCoverage 1.0000e+00 lowCoverage 0.820000 0.816688 -0.0318709 4 0.783558 0.882055 -0.0984970 9.9602e-01 2.2447e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.9151e-01 2.2814e-02 lowCoverage 1.00000000 1.0000000 lowCoverage -0.07421842 2.0356e-02 lowCoverage 0.969320 lowCoverage 0.7434457 0.8166877 -0.0905020 4 0.699837 0.882055 -0.1822174 9.9630e-01 4.5134e-05 lowCoverage 1.0000e+00 9.4029e-04 lowCoverage 9.9976e-01 7.4448e-04 lowCoverage 1.0000e+00 1.9089e-02 lowCoverage -0.13508774 3.8868e-02 lowCoverage 4.7986e-01 lowCoverage chr2 223360489 223361489 10155 ENSG00000208067 0.5640928 137 5 0.528108 101 8 0.6097222 52 5 0.9014137 94 5 0.629167 46 6 0.771676 163 8 0.495536 47 5 0.600992 101 5 0.612153 48 5 0.751488 49 5 0.638541 137 8 0.2187500 20 0 0.675312 94 8 0.677083 42 2 0.5782197 55 7 0.541667 12 0 0.805556 12 0 0.7089268 96 5 0.6688621 129 6 0.651707 138 8 0.781250 25 0 0.7982143 37 5 0.7328125 72 8 0.5825758 55 5 0.7303030 43 5 0.6013709 111 5 0.468750 40 2 0.437500 19 0 0.7531746 87 5 0.790765 122 5 0.6072502 142 5 0.5163309 152 8 0.5416883 104 8 0.6791667 63 5 0.6410256 106 5 0.5625000 30 3 0.569682 64 7 0.6990419 115 5 0.618527 89 5 0.638889 148 8 0.472348 99 5 0.494048 59 5 0.860922 106 5 0.6578467 0.5982946 0.588589 0.8630416 0.6531532 0.774059 0.573645 0.7023309 0.7157157 0.7183612 0.7287092 0.3033033 0.7365807 0.7402402 0.5999863 0.621622 0.7369588 0.757362 0.7243199 0.700757 0.8288288 0.7911197 0.851351 0.7091182 0.6869347 0.7056797 0.648649 0.545045 0.683637 0.7950427 0.7113517 0.6018326 0.6227448 0.7699700 0.6100601 0.71921922 0.5824249 0.7035056 0.7316602 0.6941942 0.6520339 0.5191978 0.806285 0 0.717737 0.727072 -6.4281e-03 5 0.646676 0.622578 0.02409808 0.2816941 0.46056617 insignificant 1.0000 1.000000 insignificant 0.597729 7.1285e-02 insignificant 1 1.000000 insignificant -0.0185762 0.7068739 lowCoverage 1 lowCoverage 0.717737 0.6950207 0.04603400 5 0.646676 0.588220 0.05845568 2.0567e-02 9.6831e-01 weaklyHypermeth 1.6997e-01 1.0000e+00 insignificant 2.3101e-01 9.2370e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.01593112 7.0343e-01 insignificant 1.0000e+00 insignificant 0.717737 0.704591 0.0014889 5 0.646676 0.628007 0.01866894 4.9732e-01 5.4112e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.3136e-01 4.5339e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.01450174 0.85511574 insignificant 1.000000 insignificant 0.727072 0.6950207 0.05255879 5 0.622578 0.588220 0.0343576 6.9456e-03 7.8630e-01 weaklyHypermeth 6.1466e-02 1.0000000 weaklyHypermeth 5.9320e-02 0.89775372 insignificant 5.0271e-01 1.00000 insignificant 0.03450734 4.6816e-01 lowCoverage 1.0000e+00 lowCoverage 0.727072 0.704591 0.0075057 5 0.622578 0.628007 -0.0054291 5.5623e-01 4.7338e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.8554e-01 7.3995e-01 insignificant 1.00000000 1.0000000 insignificant 0.03307796 6.8845e-01 lowCoverage 1.000000 lowCoverage 0.6950207 0.7045908 -0.0467616 5 0.588220 0.628007 -0.0397867 9.0426e-01 6.0340e-03 weaklyHypometh 1.0000e+00 6.7045e-02 weaklyHypometh 8.3759e-01 3.1044e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00142938 9.8539e-01 insignificant 1.0000e+00 insignificant chr2 224185989 224186989 10204 SCG2 ENSG00000171951 0.0964331 330 10 0.159256 616 11 0.2135338 365 10 0.1560313 277 10 0.113806 340 10 0.413053 572 11 0.190025 291 10 0.164621 442 10 0.096682 368 10 0.125342 317 10 0.262290 567 10 0.2259120 214 10 0.041027 287 10 0.137568 282 10 0.1350849 496 10 0.205343 221 10 0.027778 22 0 0.1445607 316 10 0.1309769 479 10 0.174608 460 10 0.276126 170 10 0.1844221 219 10 0.2609386 286 10 0.2730395 208 10 0.1994709 109 10 0.2203862 629 10 0.190900 529 10 0.091796 177 11 0.1220187 460 10 0.196152 764 10 0.1291960 694 10 0.2374323 399 10 0.0179797 390 10 0.0000000 143 10 0.1428571 388 6 0.0000000 21 2 0.048612 442 11 0.0045101 525 10 0.042316 468 10 0.172794 290 10 0.075427 215 10 0.123876 283 10 0.060330 371 11 0.1229267 0.0829279 0.170687 0.1785766 0.1100754 0.457052 0.214695 0.1328382 0.0850712 0.1396894 0.2494766 0.1359678 0.0387076 0.1227016 0.1373809 0.212304 0.0880881 0.137391 0.0933973 0.087247 0.2350688 0.0847140 0.204483 0.2533395 0.2031693 0.2261781 0.119447 0.075709 0.063742 0.1623004 0.0506414 0.2723399 0.0149333 0.0000000 0.0010142 0.00441899 0.0096756 0.0059089 0.0508936 0.0959326 0.0741084 0.1180558 0.080694 10 0.152267 0.167313 3.1836e-04 10 0.197980 0.157281 0.04069878 0.9571836 0.88197469 insignificant 1.0000 1.000000 insignificant 0.981270 3.2428e-01 insignificant 1 1.000000 insignificant -0.0377932 0.1472525 insignificant 1 insignificant 0.151925 0.0099529 0.15832172 10 0.179063 0.043101 0.13596255 2.7734e-12 1.0000e+00 weaklyHypermeth 6.4498e-11 1.0000e+00 weaklyHypermeth 7.8543e-15 1.0000e+00 weaklyHypermeth 1.3091e-12 1.0000000 weaklyHypermeth 0.12503682 1.0176e-03 weaklyHypermeth 2.9186e-02 weaklyHypermeth 0.151820 0.055351 0.0760599 10 0.140693 0.094327 0.04636551 7.7604e-04 1.0000e+00 weaklyHypermeth 5.1736e-02 1.0000e+00 weaklyHypermeth 3.8035e-04 1.0000e+00 weaklyHypermeth 4.0386e-02 1.0000000 weaklyHypermeth 0.06574801 0.05479338 insignificant 1.000000 insignificant 0.167566 0.0099529 0.15824736 10 0.191747 0.043101 0.1486460 3.8675e-12 1.0000e+00 weaklyHypermeth 1.1375e-10 1.0000000 weaklyHypermeth 6.5636e-13 1.00000000 weaklyHypermeth 1.0939e-10 1.00000 weaklyHypermeth 0.16283006 1.4619e-04 weaklyHypermeth 6.3561e-03 weaklyHypermeth 0.167566 0.056040 0.0748176 10 0.191747 0.120053 0.0716941 3.9520e-05 9.9996e-01 weaklyHypermeth 3.9520e-03 1.0000e+00 weaklyHypermeth 1.5086e-04 9.9988e-01 weaklyHypermeth 0.01885792 1.0000000 weaklyHypermeth 0.10354125 7.0348e-03 weaklyHypermeth 0.557711 insignificant 0.0099529 0.0560399 -0.0570594 10 0.043101 0.120053 -0.0769519 9.9988e-01 6.8163e-09 weaklyHypometh 1.0000e+00 2.6216e-07 weaklyHypometh 9.9999e-01 2.9993e-06 weaklyHypometh 1.0000e+00 2.1424e-04 weaklyHypometh -0.05928881 1.0530e-01 insignificant 9.6605e-01 insignificant chr2 224295789 224296789 10208 SCG2 ENSG00000171951 0.8815532 334 9 0.719498 152 9 0.5600854 153 9 0.8718597 211 9 0.738754 73 9 0.681503 389 11 0.667669 129 10 0.691173 193 10 0.636222 119 9 0.778664 118 9 0.727268 303 10 0.6025397 46 4 0.866494 128 9 0.775000 37 3 0.7763010 135 10 0.534333 77 5 0.604018 93 5 0.6603021 219 9 0.7073003 177 9 0.706999 367 11 0.649277 106 9 0.6737404 120 7 0.7380871 134 9 0.5871656 153 9 0.7388889 71 8 0.7452991 207 9 0.764909 230 9 0.611417 192 6 0.6239611 146 9 0.696663 184 9 0.7568091 214 9 0.7420730 425 11 0.8120754 182 10 0.6983604 138 10 0.6703424 135 9 0.5678713 68 3 0.533888 185 6 0.7313615 244 9 0.871208 301 11 0.786663 253 9 0.883104 221 9 0.824098 140 9 0.842597 253 9 0.8459630 0.6559124 0.563819 0.8760775 0.7515656 0.682616 0.679274 0.7706792 0.6982039 0.7670613 0.7672785 0.6724070 0.9060093 0.7808301 0.7792778 0.630163 0.6594767 0.873909 0.7760721 0.779490 0.6863412 0.6886655 0.724269 0.6371693 0.7774258 0.7179443 0.682044 0.650688 0.793962 0.7420886 0.8088925 0.7214890 0.7862005 0.8094574 0.7672305 0.68704702 0.6374369 0.8083411 0.8470851 0.8596217 0.8481250 0.8745397 0.850012 5 0.758471 0.724106 4.4171e-02 9 0.714367 0.687810 0.02655664 0.1069425 0.92395437 insignificant 1.0000 1.000000 insignificant 0.429104 9.5137e-01 insignificant 1 1.000000 insignificant 0.0153525 0.5929362 insignificant 1 insignificant 0.758791 0.7542017 0.01049920 9 0.721706 0.744549 -0.02284312 1.1931e-01 8.2761e-01 insignificant 8.6457e-01 1.0000e+00 insignificant 1.6633e-01 6.8771e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.04039362 4.2138e-01 insignificant 1.0000e+00 insignificant 0.758471 0.850171 -0.0938499 9 0.714367 0.889239 -0.17487156 9.9994e-01 8.8878e-05 weaklyHypometh 1.0000e+00 1.2697e-02 weaklyHypometh 9.9996e-01 7.0077e-05 weaklyHypometh 1.0000e+00 0.0175194 weaklyHypometh -0.13215714 0.00016847 weaklyHypometh 0.056156 weaklyHypometh 0.724598 0.7542017 -0.02986160 9 0.703884 0.744549 -0.0406649 1.4531e-01 3.2342e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant 1.8144e-01 0.13687213 insignificant 1.0000e+00 1.00000 insignificant 0.02504113 6.0359e-01 insignificant 1.0000e+00 insignificant 0.724106 0.850171 -0.1405224 9 0.687810 0.889239 -0.2014282 9.9965e-01 1.9885e-08 weaklyHypometh 1.0000e+00 1.9885e-05 weaklyHypometh 9.9993e-01 2.8628e-06 weaklyHypometh 1.00000000 0.0028628 weaklyHypometh -0.14750963 6.5652e-05 weaklyHypometh 0.032826 weaklyHypometh 0.7542017 0.8497854 -0.0938698 9 0.744549 0.872198 -0.1276497 1.0000e+00 2.6556e-04 weaklyHypometh 1.0000e+00 4.4261e-03 weaklyHypometh 1.0000e+00 6.8478e-04 weaklyHypometh 1.0000e+00 1.8021e-02 weaklyHypometh -0.17255075 7.7833e-03 weaklyHypometh 1.5688e-01 insignificant chr2 224378789 224379789 10218 SCG2 ENSG00000171951 0.7267457 166 6 0.529167 86 6 0.4748397 87 6 0.5271465 61 6 0.702480 90 6 0.632630 237 6 0.620668 128 6 0.644345 58 6 0.597619 83 6 0.582725 86 6 0.642835 167 6 0.6542485 66 6 0.613424 91 6 NA 0 0 0.6706741 139 6 0.531397 50 5 0.509800 111 6 0.7440476 47 6 0.7372170 159 6 0.735926 241 6 0.699784 42 4 0.6870370 48 6 0.6993056 91 6 0.6981481 40 4 0.6527778 34 4 0.7317162 172 6 0.851419 56 6 0.788889 29 4 0.6928673 66 6 0.684802 139 6 0.6322043 207 6 0.7092665 271 6 0.6027116 63 6 0.7103175 87 4 0.5522114 247 6 0.6040665 115 6 0.675427 60 6 0.6284812 174 6 0.725729 115 6 0.667100 110 6 0.760441 76 4 0.738032 89 6 0.621212 117 6 0.7252203 0.5207870 0.456708 0.5168561 0.7082044 0.641694 0.595425 0.6429067 0.5895971 0.5827854 0.6337402 0.6565513 0.6058807 NA 0.6682962 0.553190 0.5035504 0.747817 0.7330822 0.732163 0.7005231 0.6803704 0.697338 0.7204938 0.6412037 0.7312902 0.852724 0.783704 0.683108 0.6770172 0.6317880 0.7012534 0.5809678 0.6871693 0.5453844 0.60408394 0.6734758 0.6284182 0.7220310 0.6601491 0.7476535 0.7299502 0.609035 4 0.639573 0.711297 -6.1748e-02 6 0.638826 0.702102 -0.06327672 0.9993022 0.00881770 weaklyHypometh 1.0000 0.603253 insignificant 0.999183 5.1204e-03 weaklyHypometh 1 0.393879 insignificant -0.0855302 0.0022943 weaklyHypometh 1 insignificant 0.639573 0.5951743 0.02931383 6 0.638826 0.611563 0.02726312 6.5271e-02 8.9348e-01 insignificant 4.9076e-01 1.0000e+00 insignificant 2.5726e-01 5.4207e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.00371479 9.0333e-01 insignificant 1.0000e+00 insignificant 0.639573 0.682446 -0.0529337 6 0.638826 0.696957 -0.05813143 9.9005e-01 3.2310e-02 weaklyHypometh 1.0000e+00 9.7908e-01 insignificant 9.9826e-01 1.9592e-02 weaklyHypometh 1.0000e+00 0.9339202 insignificant -0.07734815 0.03792601 weaklyHypometh 0.972462 insignificant 0.711297 0.5951743 0.09153302 6 0.702102 0.611563 0.0905398 4.3015e-06 9.9931e-01 weaklyHypermeth 6.3257e-05 1.0000000 weaklyHypermeth 4.6924e-03 0.99726115 weaklyHypermeth 6.5173e-02 1.00000 weaklyHypermeth 0.08181543 1.6305e-02 weaklyHypermeth 2.6730e-01 insignificant 0.711297 0.682446 0.0077589 6 0.702102 0.696957 0.0051453 3.7977e-01 5.7734e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.7585e-01 7.9531e-01 insignificant 1.00000000 1.0000000 insignificant 0.00818207 7.9628e-01 insignificant 1.000000 insignificant 0.5951743 0.6824458 -0.0811009 6 0.611563 0.696957 -0.0853946 9.5502e-01 4.6162e-04 weaklyHypometh 1.0000e+00 6.6901e-03 weaklyHypometh 9.9504e-01 1.0266e-02 weaklyHypometh 1.0000e+00 1.5554e-01 insignificant -0.07363336 6.2345e-02 insignificant 6.6325e-01 insignificant chr2 224397889 224398889 10221 SCG2 ENSG00000171951 0.8320611 274 10 0.781209 150 8 0.6293558 157 11 0.8081940 190 10 0.825578 101 7 0.868519 363 11 0.613712 123 10 0.770959 193 10 0.879520 82 7 0.754049 189 10 0.777014 302 11 0.7487179 90 6 0.849494 171 9 0.606250 34 4 0.7824302 121 8 0.683159 60 5 0.832143 47 4 0.7622711 130 7 0.8593757 146 7 0.870039 328 11 0.915556 79 6 0.8896104 56 5 0.8341035 176 10 0.6810665 108 7 0.9091503 46 4 0.7654970 290 8 0.820779 101 10 0.826923 57 5 0.6786533 166 7 0.779737 231 10 0.7981852 247 9 0.7887370 457 11 0.7669629 168 9 0.6386706 130 10 0.7305199 170 9 0.7541667 74 5 0.711823 84 8 0.8521852 270 10 0.884075 311 10 0.791982 302 8 0.829179 240 10 0.882410 207 7 0.810533 228 10 0.8414389 0.7182163 0.691683 0.8756884 0.7507260 0.873718 0.666967 0.8348412 0.8849262 0.8832213 0.7794499 0.8084660 0.8753508 0.7364761 0.8123048 0.700007 0.8234373 0.810538 0.8437989 0.893630 0.9166667 0.9068144 0.849536 0.7357641 0.9015280 0.7638959 0.852080 0.781130 0.819631 0.7803762 0.8262003 0.8088876 0.7860033 0.7547288 0.8047950 0.81992337 0.7132908 0.8373272 0.8852840 0.8620741 0.8664412 0.9050846 0.847938 1 0.811443 0.819762 -5.9225e-03 10 0.786943 0.791478 -0.00453444 0.7342559 0.31814475 insignificant 1.0000 1.000000 insignificant 0.935152 1.9210e-01 insignificant 1 1.000000 insignificant -0.0306308 0.3054861 insignificant 1 insignificant 0.812172 0.8381696 0.00039221 10 0.815063 0.787752 0.02731023 2.9095e-01 2.4721e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.7063e-01 9.9598e-02 insignificant 1.0000e+00 1.0000000 insignificant 0.03431435 3.4204e-01 insignificant 1.0000e+00 insignificant 0.811443 0.864907 -0.0588427 10 0.786943 0.835964 -0.04902056 9.9943e-01 9.7611e-03 weaklyHypometh 1.0000e+00 5.4228e-01 insignificant 9.9997e-01 8.6322e-02 insignificant 1.0000e+00 1.0000000 insignificant -0.06293344 0.03411945 weaklyHypometh 0.933194 insignificant 0.820130 0.8381696 0.00287217 10 0.810679 0.787752 0.0229269 5.1262e-01 1.6997e-01 insignificant 1.0000e+00 1.0000000 insignificant 3.3696e-01 0.74899372 insignificant 1.0000e+00 1.00000 insignificant 0.06494514 1.0104e-01 insignificant 9.2693e-01 insignificant 0.819762 0.864907 -0.0577550 10 0.791478 0.835964 -0.0444861 9.9937e-01 2.2404e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9638e-01 5.2051e-01 insignificant 1.00000000 1.0000000 insignificant -0.03230265 2.8679e-01 insignificant 1.000000 insignificant 0.8381696 0.8654743 -0.0630626 10 0.787752 0.887650 -0.0998981 9.9159e-01 1.1641e-01 insignificant 1.0000e+00 8.6872e-01 insignificant 9.9969e-01 1.2351e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.09724779 2.1028e-02 weaklyHypometh 3.0823e-01 insignificant chr2 224418989 224419989 10222 AP1S3 ENSG00000152056 0.8528986 140 5 0.768803 122 5 0.6445067 78 5 0.9019048 82 5 0.706620 99 5 0.692444 301 5 0.799709 149 5 0.602961 134 5 0.699457 118 5 0.774139 97 5 0.698662 198 5 0.6964766 93 5 0.736558 124 5 0.666667 14 2 0.7137799 101 5 0.626190 68 4 0.494530 98 4 0.9057143 82 5 0.6677468 193 5 0.848693 214 5 0.792180 113 4 0.6776094 72 5 0.8100000 89 5 0.6069561 84 5 0.6013889 37 4 0.7721796 183 5 0.636961 88 5 0.743137 35 2 0.5151125 113 5 0.817433 151 5 0.8073775 162 5 0.8609197 283 5 0.7007795 129 5 0.6662005 91 5 0.6574312 113 4 0.7972222 33 3 0.607814 83 5 0.5868213 177 5 0.913786 128 5 0.707492 120 5 0.889512 112 5 0.899217 87 5 0.798596 105 5 0.8640402 0.7756889 0.727929 0.8836004 0.7609241 0.834169 0.833723 0.6407628 0.7323114 0.7831179 0.7457058 0.7220306 0.8397490 0.8268597 0.7516200 0.700601 0.6496340 0.904606 0.7125971 0.851485 0.8168142 0.8294393 0.829673 0.6671837 0.7515966 0.7889904 0.745386 0.768417 0.762575 0.8241588 0.8303378 0.8401297 0.7039954 0.6850859 0.6960438 0.83586449 0.7594160 0.7609377 0.9242474 0.8611102 0.8979377 0.8867473 0.824675 4 0.699800 0.785816 -2.2559e-02 5 0.606276 0.636917 -0.03064163 0.8873543 0.30798127 insignificant 1.0000 1.000000 insignificant 0.842391 7.1685e-01 insignificant 1 1.000000 insignificant 0.0048185 0.9027540 lowCoverage 1 lowCoverage 0.700000 0.7284345 0.02875178 5 0.607321 0.587051 0.02027011 1.1657e-01 9.8076e-01 insignificant 8.5084e-01 1.0000e+00 insignificant 1.7115e-01 9.3723e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.05554484 1.7375e-01 lowCoverage 1.0000e+00 lowCoverage 0.700360 0.878623 -0.1005506 5 0.707321 0.729880 -0.02255875 8.3102e-01 1.8731e-04 weaklyHypometh 1.0000e+00 2.1047e-02 weaklyHypometh 8.9619e-01 3.3018e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant -0.11679774 0.03661661 lowCoverage 0.963595 lowCoverage 0.786070 0.7284345 0.04982688 5 0.631959 0.587051 0.0449076 3.1324e-02 9.9929e-01 weaklyHypermeth 2.4282e-01 1.0000000 insignificant 2.3385e-01 0.98738603 insignificant 1.0000e+00 1.00000 insignificant 0.05072638 2.6741e-01 lowCoverage 1.0000e+00 lowCoverage 0.789736 0.878623 -0.0799953 5 0.743070 0.729880 0.0131898 4.2661e-01 7.7656e-03 weaklyHypometh 1.0000e+00 7.0597e-01 insignificant 7.5792e-01 3.1929e-02 weaklyHypometh 1.00000000 1.0000000 insignificant -0.12161619 3.7477e-02 lowCoverage 1.000000 lowCoverage 0.7307692 0.8802178 -0.1350581 5 0.704462 0.875856 -0.1713946 9.9674e-01 2.8099e-06 weaklyHypometh 1.0000e+00 7.0246e-05 weaklyHypometh 9.4858e-01 2.3244e-03 weaklyHypometh 1.0000e+00 4.8850e-02 weaklyHypometh -0.17234258 8.4768e-03 lowCoverage 1.6301e-01 lowCoverage chr2 225149489 225150489 10257 CUL3 ENSG00000036257 0.6301587 98 8 0.662725 91 8 0.6909722 67 7 0.8016738 104 8 0.685714 98 8 0.688454 104 8 0.567902 72 4 0.698810 95 8 0.550505 52 4 0.733333 48 7 0.775079 158 8 0.6428571 29 2 0.748782 75 8 0.734046 64 4 0.8694444 47 3 0.583333 21 2 1.000000 7 0 0.8563853 94 6 0.7958995 78 8 0.760417 42 5 1.000000 19 0 1.0000000 4 0 0.7093750 79 8 0.7708333 38 4 0.9023810 71 2 0.7190856 122 8 0.844608 46 3 0.541667 10 0 0.6937078 89 4 0.734690 139 7 0.7245536 94 8 0.7727273 61 7 0.7117758 93 8 0.8132555 70 8 0.7375901 117 8 0.5000000 6 0 0.691249 79 7 0.7683459 112 8 0.754375 81 5 0.817725 99 8 0.825379 90 6 0.831250 56 3 0.809821 101 7 0.7196779 0.6827089 0.728758 0.8091436 0.6507563 0.719953 0.593161 0.7112325 0.6281640 0.8023529 0.7747637 0.6106443 0.7606570 0.8000000 0.8739869 0.623529 0.8759582 0.842373 0.8035481 0.782353 1.0000000 0.8460117 0.707059 0.7627451 0.8605360 0.7479732 0.840877 0.699976 0.694091 0.7470974 0.7449580 0.7229947 0.7296209 0.8218229 0.7587809 0.59781141 0.7018143 0.8146523 0.7704118 0.7960224 0.8253832 0.8323529 0.800280 0 0.741307 0.748705 -7.6080e-03 7 0.726390 0.739108 -0.01271789 0.7248759 0.35241467 insignificant 1.0000 1.000000 insignificant 0.979674 1.8524e-01 insignificant 1 1.000000 insignificant -0.0606444 0.1976872 lowCoverage 1 lowCoverage 0.741307 0.7295597 -0.00110363 8 0.726390 0.724462 0.00192842 5.3547e-01 5.4790e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.9322e-01 7.3946e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.02012185 7.0141e-01 insignificant 1.0000e+00 insignificant 0.739764 0.810304 -0.0642111 7 0.645680 0.818903 -0.17322260 9.9980e-01 4.8071e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9888e-01 3.1208e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant -0.08388545 0.00684348 weaklyHypometh 0.424154 insignificant 0.748705 0.7295597 0.00660627 7 0.739108 0.724462 0.0146463 1.5183e-01 2.8806e-01 insignificant 1.0000e+00 1.0000000 insignificant 2.3727e-01 0.85952838 insignificant 1.0000e+00 1.00000 insignificant 0.08076625 1.9313e-01 lowCoverage 1.0000e+00 lowCoverage 0.748705 0.809859 -0.0588194 6 0.739108 0.796266 -0.0571575 9.8574e-01 3.4459e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 7.7251e-01 2.4221e-01 insignificant 1.00000000 1.0000000 insignificant -0.02324105 5.7780e-01 lowCoverage 1.000000 lowCoverage 0.7295597 0.8098592 -0.0625789 7 0.724462 0.796266 -0.0718038 9.9277e-01 2.4522e-02 weaklyHypometh 1.0000e+00 2.2293e-01 insignificant 9.9752e-01 3.8078e-02 weaklyHypometh 1.0000e+00 4.4317e-01 insignificant -0.10400729 6.6886e-02 insignificant 6.9863e-01 insignificant chr2 227234089 227235089 10321 ENSG00000208062 0.6884080 191 5 0.595606 64 5 0.6218954 95 5 0.5747974 103 5 0.630556 46 5 0.629206 228 5 0.526660 90 5 0.664431 61 5 0.592641 93 5 0.611538 61 5 0.666957 123 5 0.4449634 74 5 0.540725 118 5 NA 0 0 0.5709158 95 5 0.600000 65 5 0.636190 81 5 0.6664251 72 5 0.6315934 53 5 0.674654 199 5 0.635348 47 3 0.5966667 54 5 0.5950681 112 5 0.6533333 50 5 0.6847619 45 5 0.5564469 87 5 0.536117 61 5 0.560088 57 3 0.6661117 50 5 0.607685 98 5 0.6619048 50 5 0.6463227 237 5 0.5128571 82 5 0.5266667 85 5 0.7654762 52 5 0.6924242 39 4 0.619804 54 3 0.6185499 76 5 0.632420 171 5 0.727995 163 5 0.593103 119 5 0.669027 138 5 0.693167 145 5 0.6815204 0.5861550 0.613759 0.5653399 0.6224218 0.617440 0.510712 0.6605018 0.5810327 0.6003762 0.6567921 0.4344388 0.5310279 NA 0.5616964 0.597421 0.6276305 0.660534 0.6243667 0.664195 0.6229300 0.5875522 0.584391 0.6443114 0.6826347 0.5432827 0.519091 0.545554 0.664629 0.5969361 0.6525520 0.6379371 0.5116125 0.5193613 0.7620473 0.68535656 0.6001879 0.6029656 0.6252565 0.7230386 0.5821854 0.6604579 0.689671 5 0.619770 0.627637 1.1381e-03 5 0.613383 0.610968 0.00241482 0.3404278 0.55333434 insignificant 1.0000 1.000000 insignificant 0.513979 5.9269e-01 insignificant 1 1.000000 insignificant -0.0078039 0.6936753 lowCoverage 1 lowCoverage 0.619770 0.6082474 0.02230184 5 0.613383 0.590102 0.02328115 9.3322e-02 8.8584e-01 insignificant 6.9127e-01 1.0000e+00 insignificant 4.7709e-01 4.7396e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.01377908 7.5190e-01 lowCoverage 1.0000e+00 lowCoverage 0.619770 0.673913 -0.0522179 5 0.613383 0.666797 -0.05341465 9.8457e-01 1.2972e-02 weaklyHypometh 1.0000e+00 5.8025e-01 insignificant 9.9109e-01 4.7515e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant -0.05429193 0.08557007 lowCoverage 1.000000 lowCoverage 0.627637 0.6082474 0.02269029 5 0.610968 0.590102 0.0208663 3.0148e-01 9.1946e-01 insignificant 1.0000e+00 1.0000000 insignificant 7.3015e-01 0.68035876 insignificant 1.0000e+00 1.00000 insignificant -0.00597518 8.9084e-01 lowCoverage 1.0000e+00 lowCoverage 0.627637 0.673913 -0.0500215 5 0.610968 0.666797 -0.0558295 8.6909e-01 6.5772e-03 weaklyHypometh 1.0000e+00 6.9604e-01 insignificant 8.8495e-01 5.6980e-02 insignificant 1.00000000 1.0000000 insignificant -0.04648804 1.3230e-01 lowCoverage 1.000000 lowCoverage 0.6082474 0.6739130 -0.0694626 5 0.590102 0.666797 -0.0766958 9.8535e-01 4.3862e-03 weaklyHypometh 1.0000e+00 4.9843e-02 weaklyHypometh 9.2275e-01 7.6526e-02 insignificant 1.0000e+00 7.3583e-01 insignificant -0.04051285 4.0285e-01 lowCoverage 1.0000e+00 lowCoverage chr2 227363889 227364889 10325 ENSG00000208062 0.0118805 1512 25 0.014995 1363 25 0.0111667 958 25 0.0101059 1098 25 0.016026 660 25 0.054539 1504 25 0.062343 989 25 0.028042 1163 25 0.028357 1308 25 0.028211 1065 25 0.051428 1199 25 0.0275557 1219 25 0.032498 940 25 0.012850 401 6 0.0251701 1343 25 0.028012 1324 25 0.031807 2371 24 0.0820277 1089 25 0.0354359 924 24 0.035985 1246 25 0.054464 218 21 0.0105041 667 24 0.0096046 1068 25 0.0183084 435 25 0.0022518 370 23 0.0568317 1273 25 0.007862 795 27 0.027614 469 25 0.0256408 995 24 0.055435 1482 25 0.0158505 1106 25 0.0056643 1521 25 0.0285904 835 25 0.0145068 608 24 0.0095151 791 24 0.0015432 461 19 0.071075 750 24 0.0153530 1154 25 0.068920 1931 24 0.015909 1470 24 0.029290 1366 24 0.015264 1301 24 0.037258 1461 24 0.0206736 0.0165459 0.013344 0.0134876 0.0123392 0.022525 0.018980 0.0255106 0.0235438 0.0239847 0.0174196 0.0194334 0.0370807 NA 0.0241909 0.020033 0.0195811 0.020723 0.0308424 0.021307 0.0163342 0.0180570 0.016776 0.0200359 0.0035606 0.0191967 0.008568 0.034380 0.026493 0.0223826 0.0201106 0.0068825 0.0137998 0.0131974 0.0093833 0.00086356 0.0455700 0.0196002 0.0206817 0.0280488 0.0194012 0.0259146 0.037273 23 0.029735 0.017988 7.9257e-03 25 0.052670 0.020110 0.03256094 0.3187998 0.85424812 insignificant 1.0000 1.000000 insignificant 0.460831 9.9836e-01 insignificant 1 1.000000 insignificant 0.0072526 0.3264588 insignificant 1 insignificant 0.029735 0.0169713 0.00768019 25 0.052670 0.042324 0.01034663 2.9877e-01 9.7429e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.2306e-01 9.9802e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.00799133 4.9251e-01 insignificant 1.0000e+00 insignificant 0.029695 0.021251 0.0049219 24 0.036694 0.074774 -0.03807952 5.3973e-01 6.7926e-04 inconclusive 1.0000e+00 6.7926e-02 inconclusive 8.4571e-01 6.3393e-02 insignificant 1.0000e+00 1.0000000 insignificant -0.00190649 0.86462004 insignificant 1.000000 insignificant 0.017982 0.0171776 0.00052038 25 0.019439 0.052024 -0.0325849 7.8163e-01 9.2929e-01 insignificant 1.0000e+00 1.0000000 insignificant 8.5266e-01 0.94130366 insignificant 1.0000e+00 1.00000 insignificant 0.00073872 9.5139e-01 insignificant 1.0000e+00 insignificant 0.017989 0.021251 -0.0084075 24 0.020828 0.074774 -0.0539462 9.8182e-01 6.2868e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9881e-01 1.8605e-01 insignificant 1.00000000 1.0000000 insignificant -0.00915910 4.4970e-01 insignificant 1.000000 insignificant 0.0167610 0.0212512 -0.0105956 24 0.025978 0.074774 -0.0487957 9.9872e-01 3.0245e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.0000e+00 1.7387e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00989782 5.0201e-01 insignificant 1.0000e+00 insignificant chr2 229702189 229703189 10384 SPHKAP ENSG00000153820 0.7914137 214 5 0.725377 72 5 0.7233045 73 5 0.8517927 98 5 0.597727 43 5 0.797144 132 5 0.766031 63 5 0.647628 44 4 0.720202 38 4 0.913918 57 4 0.803996 113 5 0.7539394 56 5 0.684921 93 5 NA 0 0 0.7839394 81 5 0.767222 48 5 0.716923 76 5 0.8136471 111 5 0.8359420 94 5 0.840116 111 5 0.904762 24 3 0.8233333 33 3 0.7970394 132 5 0.9191919 24 2 0.8400000 35 5 0.7265106 116 5 0.805556 27 2 0.960000 14 2 0.7800000 49 4 0.847143 125 5 0.8190476 88 5 0.7901190 161 5 0.5932576 70 4 0.6688794 68 5 0.8326546 71 5 0.8969697 37 3 0.680193 60 4 0.8040000 83 5 0.869055 175 5 0.824914 212 5 0.800221 143 5 0.878103 179 5 0.747426 174 5 0.8317340 0.7090822 0.768388 0.8541424 0.5260175 0.805043 0.774092 0.7330386 0.7032367 0.9150126 0.8451886 0.7276598 0.7679585 NA 0.8394050 0.802210 0.6860111 0.814083 0.8048966 0.816847 0.9398679 0.8615572 0.824656 0.8724471 0.8094891 0.7967210 0.744931 0.940146 0.863504 0.8763121 0.8470629 0.8226234 0.6636004 0.6738837 0.8016866 0.87198629 0.7230333 0.7928467 0.8909595 0.8474504 0.8229608 0.8978820 0.759869 2 0.787879 0.816425 -2.8416e-02 5 0.779743 0.800086 -0.02034311 0.8919445 0.05362674 insignificant 1.0000 1.000000 insignificant 0.999317 1.3240e-03 weaklyHypometh 1 0.189149 insignificant -0.0693821 0.0118491 lowCoverage 1 lowCoverage 0.787879 0.7557841 0.03691330 5 0.779743 0.750063 0.02967947 1.2206e-01 8.6732e-01 insignificant 8.7813e-01 1.0000e+00 insignificant 3.0816e-01 8.8601e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.01901734 7.1822e-01 lowCoverage 1.0000e+00 lowCoverage 0.787879 0.827860 -0.0477400 5 0.779743 0.825609 -0.04586601 9.9333e-01 2.7054e-02 weaklyHypometh 1.0000e+00 9.0179e-01 insignificant 9.9606e-01 1.0458e-02 weaklyHypometh 1.0000e+00 0.7144549 insignificant -0.05893405 0.07740577 lowCoverage 1.000000 lowCoverage 0.816425 0.7557841 0.06908583 5 0.800086 0.750063 0.0500226 4.8006e-03 8.7573e-01 weaklyHypermeth 4.5289e-02 1.0000000 weaklyHypermeth 1.4319e-02 0.99704441 weaklyHypermeth 1.5910e-01 1.00000 insignificant 0.08839944 1.2887e-01 lowCoverage 1.0000e+00 lowCoverage 0.816425 0.827860 -0.0199663 5 0.800086 0.825609 -0.0255229 9.4696e-01 1.9109e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.3116e-01 7.6154e-01 insignificant 1.00000000 1.0000000 insignificant 0.01044805 7.3917e-01 lowCoverage 1.000000 lowCoverage 0.7557841 0.8278596 -0.0862132 5 0.750063 0.825609 -0.0755455 9.8705e-01 1.5541e-02 weaklyHypometh 1.0000e+00 1.5387e-01 insignificant 9.8714e-01 6.7903e-02 insignificant 1.0000e+00 6.7903e-01 insignificant -0.07795139 1.8342e-01 lowCoverage 1.0000e+00 lowCoverage chr2 230556489 230557489 10406 ENSG00000206725 0.6678571 90 5 0.676317 126 5 0.6652308 116 5 0.7818182 54 5 0.478788 52 5 0.711428 187 5 0.774151 80 5 0.764543 68 5 0.703788 47 5 0.745518 72 5 0.635317 127 5 0.8154248 81 5 0.822894 64 5 NA 0 0 0.7403175 64 5 0.709524 60 5 0.834167 78 5 0.7587821 72 5 0.8073260 44 5 0.806509 112 5 0.704762 31 5 0.8046296 47 5 0.8168261 97 5 0.6415584 44 3 0.7333333 26 3 0.6083333 88 5 0.737143 44 5 0.597222 32 4 0.8120879 55 5 0.824293 92 5 0.6676753 116 5 0.7017222 173 5 0.5631193 78 5 0.5903297 69 5 0.7284745 83 5 0.5666667 29 2 0.551587 46 5 0.6134709 119 5 0.770476 83 5 0.845884 79 5 0.834444 50 5 0.718350 81 5 0.721190 100 5 0.6789707 0.7603095 0.671285 0.7906874 0.6865669 0.727696 0.789739 0.7756164 0.7057003 0.7630406 0.7747677 0.8212179 0.8292739 NA 0.7502323 0.714092 0.8407266 0.775678 0.8178996 0.781111 0.8419861 0.7808604 0.823220 0.8125831 0.7510163 0.7394369 0.753855 0.736789 0.814560 0.7960317 0.6831641 0.7144532 0.5754037 0.5917046 0.7360048 0.57825203 0.6660859 0.6327149 0.7774100 0.8566867 0.8398035 0.7326497 0.737743 5 0.747177 0.749112 4.0325e-03 5 0.603690 0.615555 -0.01186448 0.7820654 0.85371159 insignificant 1.0000 1.000000 insignificant 0.947431 7.8628e-01 insignificant 1 1.000000 insignificant 0.0107643 0.7279883 lowCoverage 1 lowCoverage 0.748586 0.6367925 0.12636044 5 0.704306 0.516504 0.18780152 8.6350e-07 1.0000e+00 weaklyHypermeth 1.3083e-05 1.0000e+00 weaklyHypermeth 5.4250e-05 1.0000e+00 weaklyHypermeth 1.2247e-03 1.0000000 weaklyHypermeth 0.12928840 2.5431e-03 lowCoverage 6.6923e-02 lowCoverage 0.749212 0.814249 -0.0302303 5 0.745167 0.777053 -0.03188596 9.7148e-01 1.2757e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4138e-01 1.6607e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.04650583 0.19766419 lowCoverage 1.000000 lowCoverage 0.752675 0.6367925 0.12244275 5 0.718147 0.516504 0.2016434 7.6141e-06 1.0000e+00 weaklyHypermeth 1.1035e-04 1.0000000 weaklyHypermeth 1.1640e-04 0.99999751 weaklyHypermeth 2.7715e-03 1.00000 weaklyHypermeth 0.11852409 5.8878e-03 lowCoverage 1.2266e-01 lowCoverage 0.753589 0.814249 -0.0352771 5 0.741777 0.777053 -0.0352757 9.8148e-01 9.1339e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 8.4588e-01 2.5908e-01 insignificant 1.00000000 1.0000000 insignificant -0.05727014 1.4086e-01 lowCoverage 1.000000 lowCoverage 0.6382979 0.8142494 -0.1552073 5 0.619805 0.777053 -0.1572478 1.0000e+00 6.3299e-06 weaklyHypometh 1.0000e+00 1.4721e-04 weaklyHypometh 1.0000e+00 1.3330e-04 weaklyHypometh 1.0000e+00 5.1269e-03 weaklyHypometh -0.17579423 1.3113e-03 lowCoverage 4.8566e-02 lowCoverage chr2 231188989 231189989 10412 ENSG00000199791 0.8667997 153 5 0.706090 100 5 0.6300000 67 5 0.8854762 66 5 0.831019 38 4 0.827857 110 5 0.595278 52 4 0.707903 81 5 0.588889 27 2 0.821530 61 5 0.829715 140 5 0.5190476 36 2 0.847883 98 5 0.883333 26 3 0.8057143 50 5 0.925926 25 2 0.921429 22 1 0.8792308 58 5 0.7719799 64 5 0.838273 115 5 0.882323 30 3 0.9314286 36 4 0.8169082 71 5 0.6884848 50 5 0.7800000 32 4 0.9031140 108 5 1.000000 40 5 0.660000 20 2 0.7688889 79 5 0.864784 125 5 0.8611953 106 5 0.7957638 142 5 0.8112554 51 5 0.7963977 79 5 0.8557843 80 5 0.8541667 22 2 0.864286 33 3 0.7999226 106 5 0.887909 116 5 0.909499 117 5 0.846824 103 5 0.774597 104 5 0.837319 104 5 0.8524057 0.7065018 0.664881 0.9008078 0.7774058 0.857015 0.652691 0.7202630 0.5714286 0.7739800 0.8033086 0.6443452 0.8403975 0.8337151 0.7948980 0.919643 0.8759566 0.883860 0.7500783 0.835829 0.8513258 0.8910714 0.799595 0.7296691 0.6875000 0.8811776 1.000000 0.642857 0.790030 0.8570028 0.8403905 0.7794810 0.8026438 0.7506286 0.8132659 0.86079887 0.8290816 0.7826390 0.9070783 0.9089010 0.8119613 0.7830407 0.793640 2 0.805616 0.839094 -2.9194e-02 5 0.833545 0.866074 -0.03252949 0.8548434 0.14007384 insignificant 1.0000 1.000000 insignificant 0.952039 1.3013e-01 insignificant 1 1.000000 insignificant -0.0452390 0.2550062 lowCoverage 1 lowCoverage 0.805616 0.7951482 0.01413550 5 0.833545 0.836479 -0.00293381 6.7829e-02 3.4566e-01 insignificant 5.0619e-01 1.0000e+00 insignificant 7.3363e-01 2.4508e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.04613349 1.3103e-01 lowCoverage 1.0000e+00 lowCoverage 0.805616 0.847426 -0.0447397 5 0.833545 0.875065 -0.04152041 9.9280e-01 2.5931e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9689e-01 1.9248e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.06706098 0.07657367 lowCoverage 1.000000 lowCoverage 0.839094 0.7951482 0.04532166 5 0.866074 0.836479 0.0295957 1.1303e-01 9.7207e-01 insignificant 7.9599e-01 1.0000000 insignificant 6.1318e-01 0.95775263 insignificant 1.0000e+00 1.00000 insignificant -0.00089448 9.7740e-01 lowCoverage 1.0000e+00 lowCoverage 0.839094 0.847426 -0.0150281 5 0.866074 0.875065 -0.0089909 8.5891e-01 5.6603e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.3325e-01 4.8696e-01 insignificant 1.00000000 1.0000000 insignificant -0.02182196 5.6138e-01 lowCoverage 1.000000 lowCoverage 0.7951482 0.8474265 -0.0587725 5 0.836479 0.875065 -0.0385866 8.9898e-01 1.7616e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.7093e-01 6.3725e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02092749 4.5827e-01 lowCoverage 1.0000e+00 lowCoverage chr2 231734989 231735989 10435 ENSG00000201574 0.7432707 213 7 0.643353 68 4 0.8301282 82 4 0.7277948 116 7 0.777083 35 4 0.767303 227 7 0.635621 69 4 0.695543 70 4 0.767857 37 4 0.686905 41 4 0.740385 80 4 0.6614583 56 4 0.764881 75 4 NA 0 0 0.8057759 70 4 0.639286 25 4 0.796104 27 2 0.6429147 107 5 0.7672889 131 6 0.772084 174 7 0.937500 13 1 0.8121843 37 4 0.8209703 115 7 0.8888889 25 2 0.8333333 32 3 0.7013203 140 8 0.612879 24 3 0.916667 34 4 0.7333333 49 4 0.765587 136 6 0.6373008 139 6 0.8194691 162 7 0.6418067 58 4 0.5572917 50 4 0.6253661 146 8 0.7523810 35 2 0.666667 37 3 0.6610206 152 7 0.801695 161 7 0.825624 193 8 0.783281 146 7 0.663774 145 5 0.801655 193 7 0.8388430 0.7177128 0.837529 0.6991040 0.8409091 0.739238 0.661171 0.7592292 0.8097403 0.7599567 0.7500000 0.6998106 0.8268398 NA 0.8259481 0.681169 0.7845336 0.817546 0.7748716 0.752018 0.9318182 0.8006772 0.806999 0.8787879 0.8030303 0.7099410 0.638430 0.909091 0.784091 0.8110485 0.6637468 0.7801789 0.6514515 0.5918561 0.7446209 0.80357143 0.7386364 0.6602103 0.8406906 0.7850286 0.8542717 0.7653785 0.745396 2 0.745156 0.759382 -2.5522e-03 5 0.790296 0.811434 -0.02113730 0.9400115 0.79485632 insignificant 1.0000 1.000000 insignificant 0.992025 6.0415e-01 insignificant 1 1.000000 insignificant -0.0602139 0.0880228 lowCoverage 1 lowCoverage 0.744856 0.6631799 0.10850758 5 0.737871 0.621792 0.11607854 8.4109e-05 9.9975e-01 weaklyHypermeth 1.0783e-03 1.0000e+00 weaklyHypermeth 3.9277e-02 9.9685e-01 weaklyHypermeth 3.8888e-01 1.0000000 insignificant 0.07898333 2.7534e-02 lowCoverage 4.1095e-01 lowCoverage 0.744856 0.768496 -0.0283144 5 0.737871 0.789862 -0.05199118 9.9148e-01 1.9509e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8986e-01 2.3519e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.04546719 0.20428437 lowCoverage 1.000000 lowCoverage 0.758850 0.6631799 0.10933735 5 0.764292 0.621792 0.1425002 8.9383e-04 1.0000e+00 weaklyHypermeth 9.9315e-03 1.0000000 weaklyHypermeth 3.0392e-02 0.99998930 weaklyHypermeth 2.9796e-01 1.00000 insignificant 0.13919728 3.0987e-03 lowCoverage 7.2062e-02 lowCoverage 0.758850 0.768496 -0.0247909 5 0.764292 0.789862 -0.0255695 8.8504e-01 3.1930e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.4960e-01 6.5753e-01 insignificant 1.00000000 1.0000000 insignificant 0.01474676 7.2795e-01 lowCoverage 1.000000 lowCoverage 0.6631799 0.7684964 -0.1258466 6 0.621792 0.789862 -0.1680697 9.9975e-01 3.2257e-04 weaklyHypometh 1.0000e+00 5.1201e-03 weaklyHypometh 9.9935e-01 2.7610e-02 weaklyHypometh 1.0000e+00 3.5857e-01 insignificant -0.12445052 1.1092e-02 lowCoverage 2.0330e-01 lowCoverage chr2 231984589 231985589 10441 B3GNT7 ENSG00000156966 0.0044497 2009 43 0.036416 1746 47 0.0164315 1900 47 0.0116454 1437 39 0.026441 1373 44 0.088205 3084 46 0.016201 1742 44 0.030322 1503 44 0.030303 1647 43 0.027792 2023 43 0.013852 1991 44 0.0055223 1957 44 0.054007 1695 42 0.037838 953 28 0.0076308 2236 43 0.016073 2070 43 0.010469 840 31 0.0135644 2507 43 0.0162948 1622 43 0.046955 2207 42 0.035849 675 42 0.0185802 849 33 0.0198247 1281 47 0.0079604 1180 44 0.0177203 690 32 0.0047475 2262 47 0.025640 1455 43 0.039271 964 42 0.0056021 1660 43 0.008198 2405 46 0.0083659 2491 46 0.0072225 2136 45 0.0118113 1248 46 0.0051597 1171 43 0.0925499 1029 20 0.0000000 432 35 0.095220 800 39 0.0050177 1619 46 0.030324 2507 39 0.015960 2059 42 0.008327 1578 38 0.010320 1923 33 0.032504 1795 37 0.0065082 0.0059618 0.006166 0.0137510 0.0069216 0.021815 0.011698 0.0066544 0.0090453 0.0080298 0.0095728 0.0076046 0.0105003 0.0058651 0.0092207 0.014458 0.0093272 0.012498 0.0076796 0.016392 0.0147533 0.0177926 0.022014 0.0127001 0.0141415 0.0053107 0.010228 0.024693 0.007704 0.0080289 0.0064931 0.0109310 0.0102118 0.0061291 0.0326198 0.00000000 0.0387317 0.0060087 0.0117959 0.0161543 0.0108716 0.0106858 0.015586 35 0.011959 0.012023 7.5532e-04 45 0.091488 0.018951 0.07253787 0.0507173 0.99984107 insignificant 1.0000 1.000000 insignificant 0.090611 9.9910e-01 insignificant 1 1.000000 insignificant 0.0089388 0.1247617 insignificant 1 insignificant 0.011879 0.0169895 -0.00405528 45 0.070640 0.070098 0.00054216 4.1064e-01 8.6016e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.0630e-01 1.0000e+00 insignificant 1.0000e+00 1.0000000 insignificant -0.00943915 6.4229e-01 insignificant 1.0000e+00 insignificant 0.011638 0.015615 -0.0035201 39 0.026414 0.031078 -0.00466382 7.7279e-01 3.1832e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.5450e-01 4.4921e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.00603370 0.39067830 insignificant 1.000000 insignificant 0.012038 0.0169895 -0.00497716 46 0.020584 0.070098 -0.0495133 9.9577e-01 7.3862e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.7981e-01 0.99850723 insignificant 1.0000e+00 1.00000 insignificant -0.01837797 3.7541e-01 insignificant 1.0000e+00 insignificant 0.012072 0.015615 -0.0042633 39 0.023409 0.031078 -0.0076681 9.9328e-01 7.7474e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9804e-01 2.5500e-01 insignificant 1.00000000 1.0000000 insignificant -0.00290511 6.4625e-01 insignificant 1.000000 insignificant 0.0164065 0.0156155 -0.0013728 39 0.037235 0.031078 0.0061575 9.9951e-01 3.4377e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.0000e+00 6.5265e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01547285 4.5624e-01 insignificant 1.0000e+00 insignificant chr2 232177189 232178189 10443 C2orf57 ENSG00000177673 0.0143268 1260 39 0.033976 1137 38 0.0084635 1495 43 0.0031618 994 36 0.021299 595 33 0.073047 1621 34 0.020518 1280 34 0.022392 964 33 0.019105 1176 39 0.013052 1286 33 0.020450 1176 33 0.0157119 1133 34 0.012336 1180 39 0.012500 105 8 0.0137791 1277 40 0.020027 967 33 0.016089 1136 38 0.0180590 1125 31 0.0134949 836 38 0.067648 1666 41 0.073777 557 30 0.0511249 800 32 0.0391753 1191 38 0.0047532 595 32 0.0358816 574 32 0.0056616 1482 39 0.042487 800 32 0.047192 497 30 0.0241148 823 32 0.009739 1547 39 0.0078388 1513 39 0.0300111 1982 38 0.0376570 972 39 0.0251967 715 32 0.0064516 526 25 0.0012788 615 32 0.046570 335 29 0.0304880 1145 37 0.020158 1681 38 0.059644 1442 35 0.014495 1145 36 0.022677 1571 37 0.046149 1356 33 0.0217791 0.0120620 0.012076 0.0045189 0.0226696 0.024028 0.020682 0.0110530 0.0173777 0.0142325 0.0232050 0.0185115 0.0149644 NA 0.0145687 0.026543 0.0223021 0.012486 0.0190743 0.019978 0.0176503 0.0034716 0.031840 0.0071105 0.0097798 0.0065842 0.031094 0.035656 0.022520 0.0081190 0.0078349 0.0210932 0.0067336 0.0164480 0.0072170 0.00107444 0.0156695 0.0058673 0.0073724 0.0080537 0.0051863 0.0096483 0.017501 31 0.018207 0.016746 1.4411e-03 33 0.031747 0.043789 -0.01204282 0.7297611 0.93205272 insignificant 1.0000 1.000000 insignificant 0.454620 9.9469e-01 insignificant 1 1.000000 insignificant -0.0090078 0.2353534 insignificant 1 insignificant 0.018535 0.0109099 0.00763192 33 0.034569 0.051799 -0.01722999 2.4850e-02 9.9877e-01 weaklyHypermeth 2.0203e-01 1.0000e+00 insignificant 6.5336e-03 9.9996e-01 weaklyHypermeth 8.9502e-02 1.0000000 weaklyHypermeth -0.00263508 7.5669e-01 insignificant 1.0000e+00 insignificant 0.018123 0.009034 0.0082029 34 0.020686 0.047751 -0.02706520 1.2205e-01 9.6621e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.6909e-02 9.9922e-01 weaklyHypermeth 1.0000e+00 1.0000000 insignificant -0.01065259 0.30691521 insignificant 1.000000 insignificant 0.016607 0.0109099 0.00582226 37 0.036571 0.051799 -0.0152278 4.8931e-01 9.9960e-01 insignificant 1.0000e+00 1.0000000 insignificant 4.5842e-01 0.99999394 insignificant 1.0000e+00 1.00000 insignificant 0.00637270 5.1569e-01 insignificant 1.0000e+00 insignificant 0.016516 0.009034 0.0057905 31 0.031823 0.047751 -0.0159284 3.5284e-01 9.8447e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.2893e-01 9.9936e-01 insignificant 1.00000000 1.0000000 insignificant -0.00164481 8.8088e-01 insignificant 1.000000 insignificant 0.0104530 0.0092303 -0.0018736 31 0.030952 0.052193 -0.0212414 9.9449e-01 9.6352e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9993e-01 9.8616e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00801751 4.9609e-01 insignificant 1.0000e+00 insignificant chr2 232213889 232214889 10447 C2orf57 ENSG00000177673 0.7196439 633 18 0.716617 417 18 0.6453829 258 16 0.7029144 444 17 0.796661 220 15 0.719590 747 17 0.721353 248 15 0.701696 335 16 0.640902 281 17 0.773711 207 14 0.732810 575 19 0.6204308 146 13 0.788004 303 15 0.833819 113 10 0.7213858 271 15 0.702460 155 15 0.627803 231 10 0.6830620 460 19 0.7609164 338 15 0.769780 673 16 0.663034 171 11 0.7217377 189 11 0.7206354 429 15 0.7008179 244 13 0.7376026 183 15 0.7052797 569 18 0.689134 272 13 0.784628 180 12 0.7324408 295 15 0.695292 527 19 0.7030500 427 17 0.7003481 832 18 0.6346112 355 14 0.6535338 300 16 0.6677358 547 17 0.7638178 127 10 0.607886 320 17 0.6442941 428 16 0.707485 485 18 0.719062 600 18 0.724141 522 16 0.780901 438 15 0.667545 605 16 0.8190676 0.7715127 0.669323 0.8339581 0.8275532 0.825136 0.804721 0.7777273 0.7395090 0.8190209 0.8316890 0.7674129 0.8552755 0.8001992 0.7806200 0.754391 0.7453900 0.757894 0.8224270 0.814562 0.7788200 0.7929597 0.771697 0.7891865 0.7665532 0.8375609 0.756406 0.833154 0.799846 0.8342858 0.8737581 0.7965284 0.6926221 0.7517477 0.7304148 0.78533282 0.7069827 0.7689349 0.8097513 0.8273005 0.8402130 0.8565063 0.858915 10 0.800000 0.795507 -4.8637e-03 17 0.693284 0.693630 -0.00034625 0.5253361 0.35731618 insignificant 1.0000 1.000000 insignificant 0.403850 1.7820e-01 insignificant 1 1.000000 insignificant 0.0061137 0.6975773 insignificant 1 insignificant 0.800142 0.7722677 0.03600263 17 0.697171 0.610037 0.08713445 1.1656e-04 9.7142e-01 weaklyHypermeth 1.4754e-03 1.0000e+00 weaklyHypermeth 2.3495e-03 9.4642e-01 weaklyHypermeth 4.0509e-02 1.0000000 weaklyHypermeth 0.05696733 5.2833e-02 insignificant 7.2298e-01 insignificant 0.800539 0.841887 -0.0353299 16 0.703232 0.692504 0.01072804 4.6661e-01 6.5521e-03 weaklyHypometh 1.0000e+00 3.9148e-01 insignificant 7.0417e-01 7.1779e-03 weaklyHypometh 1.0000e+00 0.6523321 insignificant -0.00087976 0.96945810 insignificant 1.000000 insignificant 0.795412 0.7722677 0.03980421 17 0.680865 0.610037 0.0708285 1.6757e-03 9.4351e-01 weaklyHypermeth 1.7455e-02 1.0000000 weaklyHypermeth 3.7670e-03 0.95359466 weaklyHypermeth 5.4594e-02 1.00000 weaklyHypermeth 0.05085360 7.0575e-02 insignificant 7.5080e-01 insignificant 0.795776 0.841887 -0.0295830 16 0.694754 0.692504 0.0022503 9.7568e-01 1.5168e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9380e-01 2.3321e-01 insignificant 1.00000000 1.0000000 insignificant -0.00699348 7.4117e-01 insignificant 1.000000 insignificant 0.7726397 0.8417674 -0.0671270 16 0.636560 0.679134 -0.0425743 9.7705e-01 7.0468e-04 weaklyHypometh 1.0000e+00 9.3957e-03 weaklyHypometh 9.7677e-01 4.1906e-04 weaklyHypometh 1.0000e+00 1.2710e-02 weaklyHypometh -0.05784709 7.3377e-02 insignificant 7.4118e-01 insignificant chr2 232215489 232216489 10448 C2orf57 ENSG00000177673 0.7564935 53 5 0.507509 143 6 0.3651286 197 4 0.6083333 28 4 0.166667 4 0 0.860317 39 4 0.416667 6 0 0.711190 31 5 0.625000 36 4 0.620000 24 4 0.804762 64 5 0.0000000 2 0 0.456838 118 5 0.900000 18 0 0.5031746 35 5 0.250000 6 0 0.000000 2 0 0.4332470 193 5 0.3666667 52 5 0.624242 49 7 0.250000 6 0 0.2896703 50 5 0.6333333 33 3 0.8000000 6 0 0.6000000 36 4 0.7248842 164 7 0.490476 17 1 0.700000 8 0 0.5376471 64 4 0.667574 173 7 0.6989068 158 7 0.8139456 40 4 0.1086793 330 7 0.0000000 70 4 0.1428571 177 7 0.0000000 23 4 0.047222 36 4 0.0760511 230 7 0.463636 47 4 0.558413 84 6 0.589175 72 4 0.648252 53 4 0.537415 48 7 0.5492424 0.3148148 0.183971 0.5069444 0.4239730 0.707407 0.453530 0.6204365 0.5763889 0.6000000 0.8134921 NA 0.4223647 0.9166667 0.4193122 0.244424 NA 0.299106 0.3055556 0.443434 0.4525757 0.2542125 0.554565 0.6666667 0.5000000 0.5815657 0.456349 0.750000 0.531373 0.5285714 0.6252228 0.7750000 0.0990656 0.0000000 0.0000000 0.00000000 0.0393519 0.0508475 0.3742424 0.4348156 0.3540377 0.4229604 0.293651 0 0.581818 0.709934 -9.8295e-02 7 0.576513 0.665548 -0.08903461 0.9992482 0.01102549 weaklyHypometh 1.0000 0.603253 insignificant 0.847604 3.3337e-01 insignificant 1 1.000000 insignificant -0.1017247 0.2025760 lowCoverage 1 lowCoverage 0.581818 0.1120092 0.47620786 7 0.576513 0.086367 0.49014564 1.5216e-18 1.0000e+00 hypermethylated 5.6354e-17 1.0000e+00 hypermethylated 1.3255e-10 1.0000e+00 hypermethylated 8.8363e-09 1.0000000 hypermethylated 0.43634349 3.7437e-07 lowCoverage 2.3398e-05 lowCoverage 0.581818 0.536184 0.0288047 4 0.576513 0.575749 0.00076363 6.1866e-01 1.3191e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 1.3731e-01 8.1630e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage -0.06056654 0.36386017 lowCoverage 1.000000 lowCoverage 0.709934 0.1120092 0.58508037 7 0.665548 0.086367 0.5791802 1.0723e-24 1.0000e+00 hypermethylated 7.1487e-23 1.0000000 hypermethylated 5.6758e-10 1.00000000 hypermethylated 4.3660e-08 1.00000 hypermethylated 0.53806814 1.4569e-07 lowCoverage 1.1207e-05 lowCoverage 0.709934 0.536184 0.1260259 4 0.665548 0.575749 0.0897982 1.7453e-02 8.0165e-01 lowCoverage 4.3687e-01 1.0000e+00 lowCoverage 6.7721e-02 6.5020e-01 lowCoverage 1.00000000 1.0000000 lowCoverage 0.04115811 5.0671e-01 lowCoverage 1.000000 lowCoverage 0.1120092 0.5361842 -0.4480824 4 0.086367 0.575749 -0.4893820 1.0000e+00 3.0436e-19 lowCoverage 1.0000e+00 3.8045e-17 lowCoverage 1.0000e+00 1.0986e-07 lowCoverage 1.0000e+00 1.0986e-05 lowCoverage -0.49691003 1.2528e-06 hypomethylated 3.1319e-04 hypomethylated chr2 232215589 232216589 10449 C2orf57 ENSG00000177673 0.7564935 53 5 0.507509 143 6 0.3651286 197 4 0.6083333 28 4 0.166667 4 0 0.860317 39 4 0.416667 6 0 0.711190 31 5 0.625000 36 4 0.620000 24 4 0.804762 64 5 0.0000000 2 0 0.456838 118 5 0.900000 18 0 0.5031746 35 5 0.250000 6 0 0.000000 2 0 0.4332470 193 5 0.3666667 52 5 0.624242 49 7 0.250000 6 0 0.2896703 50 5 0.6333333 33 3 0.8000000 6 0 0.6000000 36 4 0.7248842 164 7 0.490476 17 1 0.700000 8 0 0.5376471 64 4 0.667574 173 7 0.6989068 158 7 0.8139456 40 4 0.1086793 330 7 0.0000000 70 4 0.1428571 177 7 0.0000000 23 4 0.047222 36 4 0.0760511 230 7 0.463636 47 4 0.558413 84 6 0.589175 72 4 0.648252 53 4 0.537415 48 7 0.5492424 0.3148148 0.183971 0.5069444 0.4239730 0.707407 0.453530 0.6204365 0.5763889 0.6000000 0.8134921 NA 0.4223647 0.9166667 0.4193122 0.244424 NA 0.299106 0.3055556 0.443434 0.4525757 0.2542125 0.554565 0.6666667 0.5000000 0.5815657 0.456349 0.750000 0.531373 0.5285714 0.6252228 0.7750000 0.0990656 0.0000000 0.0000000 0.00000000 0.0393519 0.0508475 0.3742424 0.4348156 0.3540377 0.4229604 0.293651 0 0.581818 0.709934 -9.8295e-02 7 0.576513 0.665548 -0.08903461 0.9992482 0.01102549 weaklyHypometh 1.0000 0.603253 insignificant 0.847604 3.3337e-01 insignificant 1 1.000000 insignificant -0.1017247 0.2025760 lowCoverage 1 lowCoverage 0.581818 0.1120092 0.47620786 7 0.576513 0.086367 0.49014564 1.5216e-18 1.0000e+00 hypermethylated 5.6354e-17 1.0000e+00 hypermethylated 1.3255e-10 1.0000e+00 hypermethylated 8.8363e-09 1.0000000 hypermethylated 0.43634349 3.7437e-07 lowCoverage 2.3398e-05 lowCoverage 0.581818 0.536184 0.0288047 4 0.576513 0.575749 0.00076363 6.1866e-01 1.3191e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 1.3731e-01 8.1630e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage -0.06056654 0.36386017 lowCoverage 1.000000 lowCoverage 0.709934 0.1120092 0.58508037 7 0.665548 0.086367 0.5791802 1.0723e-24 1.0000e+00 hypermethylated 7.1487e-23 1.0000000 hypermethylated 5.6758e-10 1.00000000 hypermethylated 4.3660e-08 1.00000 hypermethylated 0.53806814 1.4569e-07 lowCoverage 1.1207e-05 lowCoverage 0.709934 0.536184 0.1260259 4 0.665548 0.575749 0.0897982 1.7453e-02 8.0165e-01 lowCoverage 4.3687e-01 1.0000e+00 lowCoverage 6.7721e-02 6.5020e-01 lowCoverage 1.00000000 1.0000000 lowCoverage 0.04115811 5.0671e-01 lowCoverage 1.000000 lowCoverage 0.1120092 0.5361842 -0.4480824 4 0.086367 0.575749 -0.4893820 1.0000e+00 3.0436e-19 lowCoverage 1.0000e+00 3.8045e-17 lowCoverage 1.0000e+00 1.0986e-07 lowCoverage 1.0000e+00 1.0986e-05 lowCoverage -0.49691003 1.2528e-06 hypomethylated 3.1319e-04 hypomethylated chr2 232239289 232240289 10451 ENSG00000208049 0.0686978 331 9 0.053668 438 13 0.0760250 448 13 0.1292882 347 10 0.054502 339 12 0.189837 585 13 0.043334 519 13 0.030637 408 12 0.018774 549 13 0.116290 485 13 0.203904 514 13 0.0357638 414 13 0.152037 411 12 0.093598 223 7 0.0244803 486 12 0.104686 343 11 0.021393 373 11 0.0935195 354 8 0.0064103 319 10 0.023491 403 11 0.049064 226 13 0.0174322 207 10 0.1985435 341 10 0.2638042 244 12 0.2178666 344 11 0.0970564 524 13 0.096412 253 12 0.133779 165 11 0.0435885 354 11 0.105441 521 12 0.0991032 467 13 0.1014396 507 11 0.0490908 446 13 0.0157434 289 11 0.1000000 107 6 0.0019531 288 10 0.085335 237 13 0.1376202 455 13 0.139114 400 9 0.209454 321 11 0.050196 273 8 0.137477 271 8 0.134889 284 9 0.0971257 0.0468641 0.043813 0.1224373 0.0345705 0.098786 0.071230 0.0504370 0.0309517 0.0700854 0.1079477 0.0703114 0.0453273 0.0864646 0.0258162 0.135473 0.0416744 0.052286 0.0073902 0.032045 0.0779790 0.0453252 0.122224 0.0274177 0.0568641 0.0184846 0.039038 0.055518 0.074337 0.0245044 0.0609216 0.0546016 0.0019287 0.0063047 0.0122236 0.00741215 0.0165325 0.0010277 0.0920301 0.1756684 0.0398095 0.0760707 0.131992 7 0.055623 0.054738 2.0166e-03 13 0.113908 0.156204 -0.04229656 0.9193571 0.21417491 insignificant 1.0000 1.000000 insignificant 0.923111 5.4738e-01 insignificant 1 1.000000 insignificant -0.0416108 0.1114393 insignificant 1 insignificant 0.055529 0.0120813 0.04179641 13 0.107427 0.087988 0.01943914 7.3699e-05 7.5975e-01 weaklyHypermeth 9.8266e-04 1.0000e+00 weaklyHypermeth 3.6420e-05 9.7270e-01 weaklyHypermeth 9.3385e-04 1.0000000 weaklyHypermeth 0.01205960 6.3932e-01 insignificant 1.0000e+00 insignificant 0.054985 0.100129 -0.0445245 9 0.062368 0.206292 -0.14392322 9.5633e-01 5.1441e-16 weaklyHypometh 1.0000e+00 5.1441e-13 weaklyHypometh 9.3513e-01 5.9613e-05 weaklyHypometh 1.0000e+00 0.0175194 weaklyHypometh -0.05720915 0.08818614 insignificant 1.000000 insignificant 0.054616 0.0120946 0.04206356 13 0.164682 0.092387 0.0722945 5.3281e-05 9.9999e-01 weaklyHypermeth 7.1042e-04 1.0000000 weaklyHypermeth 3.7350e-05 0.99999402 weaklyHypermeth 1.0985e-03 1.00000 weaklyHypermeth 0.05367037 9.6806e-02 insignificant 9.0473e-01 insignificant 0.053956 0.100710 -0.0512471 9 0.138261 0.248066 -0.1098044 9.6391e-01 5.1001e-08 weaklyHypometh 1.0000e+00 2.5500e-05 weaklyHypometh 9.7370e-01 3.3640e-03 weaklyHypometh 1.00000000 0.5606609 insignificant -0.01559837 6.4724e-01 insignificant 1.000000 insignificant 0.0121145 0.1001292 -0.0961110 9 0.102652 0.206292 -0.1036393 9.9986e-01 4.4658e-08 weaklyHypometh 1.0000e+00 1.5399e-06 weaklyHypometh 9.9993e-01 5.1839e-05 weaklyHypometh 1.0000e+00 2.5920e-03 weaklyHypometh -0.06926875 6.7767e-02 insignificant 6.9863e-01 insignificant chr2 233426189 233427189 10465 ENSG00000199781 0.8114170 443 6 0.741116 522 6 0.5994665 273 6 0.7592427 554 6 0.718432 187 8 0.522550 461 8 0.724977 236 6 0.637011 290 8 0.654840 238 6 0.632493 245 6 0.701047 415 8 0.4478303 145 6 0.628543 454 6 0.549915 76 4 0.6596450 256 6 0.612949 104 6 0.724108 138 6 0.7233331 488 6 0.6422680 226 8 0.627831 411 8 0.677813 137 6 0.6509008 236 8 0.6514281 368 8 0.6794195 141 7 0.6575776 234 8 0.7064557 538 8 0.629943 194 4 0.542345 120 6 0.6827462 361 6 0.680292 473 7 0.7447402 533 8 0.6585592 524 8 0.6227310 414 6 0.6142072 273 4 0.5149837 246 6 0.6621324 178 6 0.535466 169 6 0.7985091 437 7 0.719154 381 6 0.628875 601 6 0.629498 474 6 0.886843 389 6 0.642866 422 6 0.8378465 0.8022684 0.777400 0.8320758 0.8463681 0.749912 0.777264 0.8239016 0.7568623 0.8216567 0.8420872 0.7303261 0.8040931 0.7853058 0.8294674 0.802110 0.7598252 0.826209 0.8181518 0.815607 0.8028395 0.8471996 0.831974 0.8474165 0.7855132 0.8415595 0.794107 0.854516 0.818499 0.8606299 0.8262120 0.7937398 0.7610607 0.7318551 0.6966395 0.76526967 0.6857949 0.8324343 0.8285850 0.8295235 0.7916847 0.8517759 0.827073 4 0.782051 0.837264 -1.4084e-02 8 0.604733 0.659913 -0.05517991 0.7726669 0.01197995 weaklyHypometh 1.0000 0.603253 insignificant 0.799463 3.9690e-03 weaklyHypometh 1 0.393879 insignificant -0.0075677 0.7531784 insignificant 1 insignificant 0.782051 0.7746069 0.05150830 8 0.604733 0.676704 -0.07197155 1.2173e-04 9.7270e-01 weaklyHypermeth 1.5216e-03 1.0000e+00 weaklyHypermeth 3.7941e-03 9.1606e-01 weaklyHypermeth 5.9283e-02 1.0000000 weaklyHypermeth 0.03127910 5.1571e-01 insignificant 1.0000e+00 insignificant 0.782305 0.870313 -0.0199179 6 0.680325 0.646898 0.03342673 1.2441e-02 1.9800e-02 weaklyHypometh 3.6590e-01 7.6155e-01 insignificant 1.3926e-01 4.6494e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant -0.04549671 0.42720569 insignificant 1.000000 insignificant 0.837264 0.7746069 0.06599834 8 0.659913 0.676704 -0.0167916 3.9732e-06 9.7125e-01 weaklyHypermeth 5.9302e-05 1.0000000 weaklyHypermeth 1.8177e-04 0.99139612 weaklyHypermeth 4.1311e-03 1.00000 weaklyHypermeth 0.03884676 4.0849e-01 insignificant 1.0000e+00 insignificant 0.837613 0.870313 -0.0020546 6 0.679902 0.646898 0.0330041 1.8206e-01 4.4714e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.0761e-02 5.5275e-01 insignificant 1.00000000 1.0000000 insignificant -0.03792905 4.9456e-01 insignificant 1.000000 insignificant 0.7744755 0.8703132 -0.0701832 6 0.636293 0.646898 -0.0106053 7.4430e-01 8.9609e-05 weaklyHypometh 1.0000e+00 1.7922e-03 weaklyHypometh 8.7927e-01 2.3448e-03 weaklyHypometh 1.0000e+00 4.8850e-02 weaklyHypometh -0.07677580 2.6628e-01 insignificant 1.0000e+00 insignificant chr2 233474689 233475689 10468 C2orf82 ENSG00000182600 0.8352284 185 8 0.469308 264 8 0.6185167 235 6 0.8500036 199 8 0.709746 117 8 0.820410 311 8 0.520649 168 8 0.685323 228 8 0.656693 199 8 0.730451 208 6 0.764007 295 8 0.7811756 123 6 0.342299 257 7 0.740287 174 8 0.5520233 306 8 0.714583 73 8 0.836111 19 1 0.5712328 261 7 0.4847332 172 8 0.519486 209 8 0.621729 82 8 0.7637992 126 8 0.7860853 210 8 0.5048501 115 8 0.7222527 66 8 0.6297246 303 8 0.636636 172 8 0.756066 125 8 0.8197240 144 8 0.455639 295 8 0.6640483 223 8 0.8060309 242 8 0.6914089 191 8 0.6018893 102 7 0.5151786 142 6 0.4166667 16 0 0.658056 150 8 0.5495434 192 8 0.818093 203 8 0.719142 153 8 0.846858 198 8 0.781553 104 6 0.776922 186 8 0.8257461 0.4096434 0.645200 0.8562939 0.6203812 0.846863 0.540566 0.6405587 0.6354056 0.7340501 0.7910813 0.7870429 0.2337650 0.7493125 0.5044025 0.715156 0.7686758 0.523079 0.3164090 0.457203 0.5275411 0.7185338 0.750656 0.5335767 0.6735609 0.6059622 0.622853 0.727395 0.780767 0.3484180 0.6137852 0.8128895 0.6607074 0.4279829 0.5749303 0.39777778 0.7050649 0.6288263 0.8538176 0.8417630 0.8356173 0.8386764 0.763434 6 0.623283 0.644318 -2.3823e-02 8 0.644679 0.599508 0.04517062 0.9387556 0.10792423 insignificant 1.0000 1.000000 insignificant 0.870914 1.2898e-01 insignificant 1 1.000000 insignificant -0.0204353 0.6649618 insignificant 1 insignificant 0.623283 0.5598991 0.07392639 8 0.644679 0.564266 0.08041271 1.0003e-03 3.6112e-01 weaklyHypermeth 1.0530e-02 1.0000e+00 weaklyHypermeth 1.4267e-02 3.9411e-01 weaklyHypermeth 1.6984e-01 1.0000000 insignificant 0.08798957 1.1760e-01 insignificant 1.0000e+00 insignificant 0.623283 0.817536 -0.2042422 8 0.644679 0.721788 -0.07710915 9.9950e-01 1.6000e-05 hypomethylated 1.0000e+00 3.2928e-03 hypomethylated 9.9895e-01 9.6415e-05 hypomethylated 1.0000e+00 0.0192830 hypomethylated -0.12840006 0.00340919 weaklyHypometh 0.279103 insignificant 0.644318 0.5598991 0.09804756 8 0.599508 0.564266 0.0352421 1.0771e-04 5.2397e-01 weaklyHypermeth 1.3988e-03 1.0000000 weaklyHypermeth 2.0012e-02 0.48928549 weaklyHypermeth 2.1066e-01 1.00000 insignificant 0.10842489 6.4483e-02 insignificant 7.2953e-01 insignificant 0.644318 0.817536 -0.1755291 8 0.599508 0.721788 -0.1222798 9.9847e-01 1.1462e-04 weaklyHypometh 1.0000e+00 2.8654e-02 weaklyHypometh 9.7854e-01 2.9298e-05 weaklyHypometh 1.00000000 0.0146489 weaklyHypometh -0.10796474 1.6588e-02 weaklyHypometh 0.871049 insignificant 0.5598991 0.8175355 -0.2609655 8 0.564266 0.721788 -0.1575219 9.9781e-01 1.8486e-06 hypomethylated 1.0000e+00 4.8829e-05 hypomethylated 9.9053e-01 5.2869e-04 hypomethylated 1.0000e+00 1.4289e-02 hypomethylated -0.21638963 1.9435e-03 weaklyHypometh 6.0733e-02 weaklyHypometh chr2 234037389 234038389 10499 DGKD ENSG00000077044 0.8418700 451 6 0.926430 388 9 0.8668177 250 9 0.9343342 304 6 0.916181 110 9 0.914493 331 9 0.801139 187 8 0.881189 247 9 0.884486 187 9 0.926638 165 9 0.950919 282 9 0.8589325 114 9 0.924543 291 8 NA 0 0 0.9009387 287 9 0.950617 54 4 0.907407 96 9 0.9460402 454 6 0.9086703 279 9 0.954924 285 9 0.842259 92 8 0.9755627 113 4 0.9033162 250 9 0.9352679 58 5 0.9736842 73 4 0.9780717 474 9 0.924992 97 6 0.945913 88 8 0.9147053 367 9 0.963923 621 9 0.9760810 421 9 0.9357298 306 9 0.8920525 358 9 0.9344724 263 9 0.8000000 27 1 0.9642857 38 5 0.932912 132 7 0.9075835 495 9 0.855052 500 6 0.938135 510 6 0.932501 430 7 0.957536 510 6 0.931912 529 6 0.9156778 0.9148493 0.819597 0.9382169 0.9347110 0.929465 0.896169 0.8962062 0.9435638 0.9748908 0.9410229 0.8878924 0.9659513 NA 0.9639981 0.990035 0.9658695 0.924391 0.8647271 0.943938 0.9541884 0.9629594 0.925152 0.9446669 0.9620842 0.9769661 0.888957 0.918248 0.930667 0.9693423 0.9701617 0.9162118 0.9007591 0.8992859 0.9403889 0.94811019 0.9455667 0.8745168 0.9355289 0.9358689 0.9386625 0.9324885 0.933416 5 0.921882 0.946622 -2.4174e-02 9 0.920829 0.948499 -0.02766956 0.9976215 0.00047467 weaklyHypometh 1.0000 0.094934 weaklyHypometh 0.902869 1.7382e-03 weaklyHypometh 1 0.217271 insignificant -0.0340430 0.0311480 weaklyHypometh 1 insignificant 0.921882 0.9131759 0.01123944 9 0.920829 0.921362 -0.00053281 3.0106e-01 4.6573e-02 inconclusive 1.0000e+00 1.0000e+00 insignificant 9.3742e-01 2.1521e-02 inconclusive 1.0000e+00 1.0000000 insignificant -0.00013518 9.9587e-01 insignificant 1.0000e+00 insignificant 0.921882 0.941509 -0.0186120 6 0.920829 0.915300 0.00552914 3.2756e-01 4.3138e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.1588e-01 2.0571e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.01794470 0.40088627 insignificant 1.000000 insignificant 0.946622 0.9131759 0.03513853 9 0.948499 0.921362 0.0271367 5.6523e-02 8.6915e-01 insignificant 4.2820e-01 1.0000000 insignificant 5.7516e-01 0.61262301 insignificant 1.0000e+00 1.00000 insignificant 0.03390779 2.3136e-01 insignificant 1.0000e+00 insignificant 0.946622 0.941509 0.0019527 6 0.948499 0.915300 0.0331987 1.6665e-03 5.8371e-01 weaklyHypermeth 6.6660e-02 1.0000e+00 weaklyHypermeth 2.5298e-02 4.2000e-01 weaklyHypermeth 0.79055659 1.0000000 insignificant 0.01609827 4.6749e-01 insignificant 1.000000 insignificant 0.9131759 0.9415087 -0.0387781 6 0.921362 0.915300 0.0060620 8.3959e-02 3.0036e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.8081e-01 7.8954e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01780952 5.5812e-01 insignificant 1.0000e+00 insignificant chr2 234053589 234054589 10500 DGKD ENSG00000077044 0.5398793 267 5 0.736159 238 4 0.5030612 100 5 0.6136843 162 4 0.540816 125 7 0.694302 275 4 0.561800 148 6 0.778167 164 5 0.530796 76 4 0.737847 63 4 0.918714 227 4 0.4523810 35 5 0.508163 68 5 0.542857 64 6 0.5053621 159 4 0.214286 25 1 1.000000 1 0 0.5171120 281 4 0.6727216 215 4 0.889687 331 4 0.807639 64 5 1.0000000 5 0 0.5865328 279 6 0.8343939 81 5 0.6533333 19 3 0.5395122 233 4 0.486899 133 5 0.541338 58 5 0.7679107 213 4 0.904982 222 4 0.8622581 270 4 0.6218129 275 4 0.5478335 158 4 0.8754857 181 4 0.5669643 145 4 NA 0 0 0.540615 168 7 0.8088445 281 4 0.558892 275 5 0.615230 220 5 0.758013 186 4 0.423376 342 4 0.642294 196 5 0.8165696 0.7779266 0.754536 0.9024094 0.9102757 0.854267 0.812348 0.8965131 0.8771637 0.8152047 0.9059151 0.7824561 0.7872180 0.8512281 0.7907898 0.281579 NA 0.805783 0.8689384 0.867122 0.7994298 1.0000000 0.876234 0.8654306 0.7298246 0.8980328 0.733831 0.702991 0.923363 0.8873284 0.8473344 0.9097892 0.9027343 0.8323580 0.9391447 NA 0.7922224 0.8945346 0.8386502 0.8780219 0.8291835 0.7337329 0.813210 1 0.812769 0.862311 -3.3917e-02 4 0.557453 0.630341 -0.07288812 0.9701527 0.00717573 lowCoverage 1.0000 0.597977 lowCoverage 0.947916 6.6915e-02 lowCoverage 1 1.000000 lowCoverage -0.0943278 0.1485697 lowCoverage 1 lowCoverage 0.812769 0.8381565 -0.05235255 4 0.557453 0.580388 -0.02293530 8.6604e-01 1.2629e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.0103e-01 9.8604e-02 lowCoverage 1.0000e+00 1.0000000 lowCoverage -0.04505869 6.0393e-01 lowCoverage 1.0000e+00 lowCoverage 0.812769 0.814602 0.0243461 4 0.557453 0.548940 0.00851245 1.1058e-02 4.3382e-01 lowCoverage 3.4557e-01 1.0000e+00 lowCoverage 8.6483e-02 5.5235e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 0.02332879 0.74070362 lowCoverage 1.000000 lowCoverage 0.862311 0.8381565 -0.02357647 4 0.630341 0.580388 0.0499528 3.4707e-01 4.5994e-03 lowCoverage 1.0000e+00 0.9198895 lowCoverage 5.4385e-01 0.11417637 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.04926910 5.8565e-01 lowCoverage 1.0000e+00 lowCoverage 0.862311 0.814602 0.0636069 4 0.630341 0.548940 0.0814006 1.5148e-03 9.1062e-01 lowCoverage 6.3116e-02 1.0000e+00 lowCoverage 4.3334e-02 8.7146e-01 lowCoverage 1.00000000 1.0000000 lowCoverage 0.11765658 1.3664e-01 lowCoverage 1.000000 lowCoverage 0.8381565 0.8146021 0.0852621 5 0.580388 0.548940 0.0314477 3.6327e-03 8.9475e-01 weaklyHypermeth 6.0544e-01 1.0000e+00 insignificant 9.2904e-02 9.8646e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.06838748 4.7280e-01 lowCoverage 1.0000e+00 lowCoverage chr2 235537589 235538589 10543 SH3BP4 ENSG00000130147 0.9187142 329 7 0.845892 189 7 0.6672281 128 8 0.9331031 323 7 0.932068 67 7 0.809710 556 7 0.900985 74 7 0.898834 163 7 0.854433 136 7 0.928236 147 7 0.813623 276 7 0.8285714 37 7 0.936844 217 7 0.922035 104 7 0.7717720 188 7 0.619536 66 5 0.900000 9 1 0.7942889 558 7 0.9601196 180 7 0.709365 312 7 0.748661 63 7 0.8774464 88 7 0.9429261 186 7 0.8320802 103 7 0.8721323 117 5 0.9242628 251 7 0.937247 141 7 0.908370 127 7 0.9118059 210 7 0.941545 263 7 0.8748098 228 8 0.8217683 201 8 0.7015088 237 7 0.6456436 182 7 0.3362926 150 3 0.8571429 16 0 0.655447 183 8 0.7908190 210 8 0.910404 229 7 0.800191 214 7 0.897669 286 8 0.910481 278 7 0.860324 258 7 0.9123649 0.8385622 0.598568 0.9306284 0.9208089 0.922167 0.898006 0.8932393 0.8498916 0.9127922 0.9201228 0.8007722 0.9328524 0.9220121 0.8809925 0.618726 0.8705422 0.754910 0.9555104 0.943147 0.8664231 0.8800642 0.941827 0.9419688 0.8533607 0.9183718 0.918871 0.878409 0.875190 0.9302400 0.8715663 0.9086089 0.6619875 0.6192494 0.5481420 0.83397683 0.6554722 0.7270474 0.9141177 0.9045861 0.8929360 0.8836492 0.841120 6 0.866470 0.900759 -3.3794e-02 7 0.715598 0.848402 -0.13280431 0.9944260 0.02461921 weaklyHypometh 1.0000 0.871200 insignificant 0.962912 7.3222e-02 insignificant 1 1.000000 insignificant -0.0354865 0.2043922 insignificant 1 insignificant 0.866831 0.5643666 0.29893241 7 0.800545 0.690923 0.10962183 1.3750e-13 8.9298e-01 hypermethylated 3.5257e-12 1.0000e+00 hypermethylated 1.0525e-02 7.2247e-01 weaklyHypermeth 1.2993e-01 1.0000000 insignificant 0.18279242 5.5379e-02 insignificant 7.3838e-01 insignificant 0.866831 0.860870 -0.0036489 7 0.800545 0.890484 -0.08993877 9.3948e-01 2.8688e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.0476e-01 4.8867e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.02854599 0.35894094 insignificant 1.000000 insignificant 0.901266 0.5654397 0.30148995 7 0.883242 0.693260 0.1899825 1.2317e-13 9.6844e-01 hypermethylated 3.8489e-12 1.0000000 hypermethylated 5.3018e-03 0.90652229 weaklyHypermeth 7.2095e-02 1.00000 weaklyHypermeth 0.21827890 3.0387e-02 weaklyHypermeth 4.1627e-01 insignificant 0.901116 0.860870 0.0305070 7 0.870269 0.890484 -0.0202150 2.5101e-01 6.9749e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.2358e-01 6.1206e-01 insignificant 1.00000000 1.0000000 insignificant 0.00694049 8.0249e-01 insignificant 1.000000 insignificant 0.5643666 0.8608696 -0.3089288 7 0.690923 0.890484 -0.1995606 9.9306e-01 7.8953e-07 hypomethylated 1.0000e+00 2.2284e-05 hypomethylated 9.8664e-01 3.8718e-02 weaklyHypometh 1.0000e+00 4.4317e-01 insignificant -0.21133841 3.4015e-02 weaklyHypometh 4.5353e-01 insignificant chr2 235600289 235601289 10551 SH3BP4 ENSG00000130147 0.8882796 243 5 0.855425 250 5 0.8939194 119 5 0.9311888 236 5 0.841716 79 5 0.918657 374 5 0.944205 149 5 0.919853 265 5 0.886826 190 5 0.947533 171 5 0.904356 173 5 0.9297778 92 5 0.951284 243 5 0.931645 139 5 0.9349575 260 5 0.837500 76 5 0.966667 15 2 0.8237103 277 5 0.9712381 179 5 0.927859 285 5 1.000000 41 5 0.7701818 117 5 0.9439559 145 5 0.9909091 100 5 0.9000000 61 5 0.9276255 335 5 0.955000 86 5 0.901778 93 5 0.9108398 176 5 0.942170 437 5 0.9732850 359 5 0.9326981 284 5 0.1638275 272 5 0.3866667 55 5 0.0000000 311 5 0.1333333 13 0 0.270637 209 5 0.1974713 240 5 0.918149 182 5 0.880734 127 5 0.966453 192 5 0.958413 133 5 0.866421 198 5 0.8941790 0.8736850 0.904117 0.9395772 0.8549297 0.924692 0.946293 0.9331178 0.8757178 0.9503263 0.9108064 0.9283298 0.9572381 0.9468460 0.9397809 0.815252 0.9758910 0.817541 0.9763193 0.929459 1.0000000 0.7629889 0.945117 0.9891366 0.9179769 0.9312235 0.960770 0.904179 0.922889 0.9409834 0.9743162 0.9315767 0.1665078 0.3865828 0.0000000 0.15408805 0.1318466 0.1949866 0.9346898 0.8933292 0.9653768 0.9576670 0.891620 5 0.916383 0.935094 -1.8837e-02 5 0.910004 0.932226 -0.02222228 0.9852868 0.08423167 insignificant 1.0000 1.000000 insignificant 0.904851 2.0393e-01 insignificant 1 1.000000 insignificant -0.0187070 0.3553536 lowCoverage 1 lowCoverage 0.916383 0.1264786 0.79044561 5 0.910004 0.128285 0.78171916 8.0330e-72 1.0000e+00 hypermethylated 2.6777e-69 1.0000e+00 hypermethylated 1.2536e-14 1.0000e+00 hypermethylated 1.7909e-12 1.0000000 hypermethylated 0.71834063 2.7596e-05 lowCoverage 1.4524e-03 lowCoverage 0.916383 0.941106 -0.0220934 5 0.910004 0.918574 -0.00857030 7.4181e-01 2.5909e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.7330e-01 3.0348e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.00770409 0.74081491 lowCoverage 1.000000 lowCoverage 0.935094 0.1264786 0.80874557 5 0.932226 0.128285 0.8039414 3.7444e-54 1.0000e+00 hypermethylated 1.2481e-51 1.0000000 hypermethylated 1.4028e-12 1.00000000 hypermethylated 2.0040e-10 1.00000 hypermethylated 0.73704767 1.0908e-05 lowCoverage 5.4541e-04 lowCoverage 0.935094 0.941106 -0.0047693 5 0.932226 0.918574 0.0136520 2.4982e-01 3.3498e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.4302e-01 6.1357e-01 insignificant 1.00000000 1.0000000 insignificant 0.01100295 6.8567e-01 insignificant 1.000000 insignificant 0.1264786 0.9411058 -0.8134939 5 0.128285 0.918574 -0.7902895 1.0000e+00 3.3617e-28 hypomethylated 1.0000e+00 8.4042e-26 hypomethylated 1.0000e+00 2.6608e-08 hypomethylated 1.0000e+00 4.4347e-06 hypomethylated -0.72604471 9.1808e-06 lowCoverage 1.3115e-03 lowCoverage chr2 237215889 237216889 10607 CXCR7 ENSG00000144476 0.7745505 167 5 0.567130 156 8 0.5257604 83 3 0.6724769 136 5 0.715469 60 5 0.782952 237 8 0.558950 92 4 0.615926 118 6 0.614858 107 8 0.764648 87 8 0.682306 205 8 0.4888393 54 3 0.531069 156 8 0.533333 22 3 0.5325000 82 5 0.633083 58 4 0.575287 48 2 0.4483244 186 8 0.8196970 106 6 0.559590 197 7 0.625000 54 5 0.3682968 71 5 0.7341865 97 8 0.5723214 65 5 0.7789502 47 4 0.6002564 186 8 0.609156 112 7 0.477511 60 6 0.7733944 138 8 0.671826 195 8 0.7133752 201 8 0.7486435 262 7 0.0068267 272 8 0.0187500 116 7 0.0000000 133 3 0.0625000 66 6 0.000000 174 8 0.0300000 240 8 0.596752 262 6 0.702629 219 8 0.614161 143 5 0.430967 183 7 0.698431 224 10 0.7738951 0.5904729 0.620895 0.7857300 0.7395243 0.805416 0.674163 0.6903733 0.7005504 0.8653143 0.7731464 0.6168203 0.5195699 0.4756753 0.6464516 0.719372 0.6793131 0.558505 0.8504399 0.800888 0.6354760 0.5063607 0.793774 0.8085253 0.6972769 0.6284136 0.718790 0.688641 0.787321 0.7631810 0.7847336 0.7242288 0.0067890 0.0083871 0.0028999 0.14838710 0.0000000 0.0611613 0.6443125 0.6926704 0.6288994 0.5653773 0.754570 3 0.699872 0.688844 -1.8064e-02 7 0.677691 0.690393 -0.01270235 0.8403201 0.54306236 insignificant 1.0000 1.000000 insignificant 0.873895 4.8961e-01 insignificant 1 1.000000 insignificant -0.0195723 0.6559799 insignificant 1 insignificant 0.699744 0.0169830 0.66906743 7 0.645460 0.015128 0.63033205 1.5291e-52 1.0000e+00 hypermethylated 3.8226e-50 1.0000e+00 hypermethylated 2.7765e-16 1.0000e+00 hypermethylated 5.5530e-14 1.0000000 hypermethylated 0.60015803 1.1901e-17 hypermethylated 1.1901e-14 hypermethylated 0.700298 0.682832 0.0527784 7 0.700418 0.653646 0.04677243 4.7031e-02 9.3025e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 2.3886e-01 9.5740e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.01124950 0.84415805 insignificant 1.000000 insignificant 0.688005 0.0170000 0.65474146 8 0.621592 0.016809 0.6047829 2.8696e-45 1.0000e+00 hypermethylated 5.7393e-43 1.0000000 hypermethylated 6.3558e-15 1.00000000 hypermethylated 1.5889e-12 1.00000 hypermethylated 0.61973034 6.7095e-10 hypermethylated 1.3419e-07 hypermethylated 0.689562 0.681597 0.0844754 7 0.726099 0.619010 0.1070889 2.7015e-03 9.7328e-01 weaklyHypermeth 1.0391e-01 1.0000e+00 insignificant 1.8241e-01 9.9847e-01 insignificant 1.00000000 1.0000000 insignificant 0.03082182 6.2669e-01 insignificant 1.000000 insignificant 0.0170341 0.6809571 -0.6280571 7 0.018910 0.596680 -0.5777696 1.0000e+00 1.6249e-29 hypomethylated 1.0000e+00 5.4163e-27 hypomethylated 1.0000e+00 1.0221e-09 hypomethylated 1.0000e+00 2.5552e-07 hypomethylated -0.58890852 1.9618e-04 hypomethylated 1.4714e-02 hypomethylated chr2 237391789 237392789 10625 CXCR7 ENSG00000144476 0.7773621 168 6 0.713709 399 6 0.6994640 184 6 0.8116680 237 7 0.748430 111 6 0.847215 438 6 0.820514 202 6 0.873438 256 6 0.778411 144 6 0.851297 130 6 0.861094 378 6 0.9223228 67 6 0.760966 184 6 0.875895 145 6 0.7797866 218 6 0.897860 81 6 1.000000 1 0 0.6607378 247 6 0.8322052 447 6 0.638060 323 6 0.950666 92 6 0.6988400 96 5 0.9189815 107 6 0.9069861 126 6 0.8671717 45 5 0.7204130 267 6 0.708609 131 6 0.746569 100 6 0.7691665 426 6 0.828669 260 6 0.8116185 235 6 0.8751025 355 6 0.8586264 250 6 0.6200922 143 6 0.9686297 654 6 0.6222222 29 3 0.863454 191 6 0.8179846 343 6 0.857390 325 7 0.744998 210 7 0.709275 201 6 0.882962 151 6 0.780999 142 6 0.7408067 0.7020378 0.693908 0.8140553 0.7318035 0.859261 0.829281 0.8572430 0.7720399 0.8619863 0.8663917 0.8846217 0.7815661 0.8539935 0.7740303 0.896669 NA 0.767293 0.8567649 0.740849 0.9624764 0.7548811 0.928247 0.8936008 0.8589692 0.7914463 0.690135 0.836489 0.804657 0.7974947 0.8381856 0.8912097 0.8448182 0.7930350 0.9775115 0.62273547 0.8689457 0.8657989 0.8618668 0.7795728 0.8485279 0.8243147 0.916426 6 0.808672 0.840950 -3.2169e-02 6 0.793950 0.787010 0.00694012 0.9527428 0.07420307 insignificant 1.0000 1.000000 insignificant 0.994278 5.6187e-02 insignificant 1 1.000000 insignificant -0.0093776 0.7743346 insignificant 1 insignificant 0.808672 0.8974518 -0.08977786 6 0.793950 0.855900 -0.06195042 9.9032e-01 6.8627e-05 weaklyHypometh 1.0000e+00 1.3725e-02 weaklyHypometh 9.4477e-01 1.9461e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant 0.01568699 8.0553e-01 insignificant 1.0000e+00 insignificant 0.808486 0.846154 -0.0408802 6 0.694706 0.842420 -0.14771369 9.9707e-01 2.8410e-02 weaklyHypometh 1.0000e+00 9.1645e-01 insignificant 9.9921e-01 4.7590e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant 0.01239691 0.75687879 insignificant 1.000000 insignificant 0.841000 0.8968944 -0.05368882 6 0.795777 0.748913 0.0468636 5.4421e-01 1.2073e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant 7.5449e-01 0.17283144 insignificant 1.0000e+00 1.00000 insignificant 0.02506458 7.0257e-01 insignificant 1.0000e+00 insignificant 0.841000 0.845331 -0.0077102 6 0.795777 0.779920 0.0158566 7.7975e-01 5.0048e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.5387e-01 6.8750e-01 insignificant 1.00000000 1.0000000 insignificant 0.02177450 6.1282e-01 insignificant 1.000000 insignificant 0.8968944 0.8453307 0.0526385 6 0.748913 0.779920 -0.0310071 1.6634e-01 8.6080e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.7382e-01 7.5527e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00329007 9.6174e-01 insignificant 1.0000e+00 insignificant chr2 237775289 237776289 10645 COPS8 ENSG00000198612 0.8617689 223 7 0.577433 254 7 0.5008904 151 7 0.7639815 208 7 0.700000 57 4 0.776358 417 7 0.801391 64 5 0.717236 200 7 0.539640 163 6 0.708393 133 5 0.845959 250 8 0.3883553 67 4 0.411798 208 7 0.752827 97 4 0.4894764 200 7 0.532549 46 3 0.400000 21 2 0.3519735 279 7 0.3517994 209 7 0.704482 252 7 0.819008 65 6 0.4894051 167 7 0.7632149 144 7 0.7781663 90 6 0.8000052 99 7 0.7182940 300 8 0.695376 129 7 0.723404 62 5 0.7117747 202 7 0.588216 358 8 0.6597017 292 8 0.7783900 340 7 0.0292209 262 8 0.0104167 117 7 0.0504202 151 7 0.0113636 101 6 0.280353 239 8 0.0023585 348 8 0.632360 243 7 0.753463 162 7 0.757183 127 7 0.523009 166 7 0.542428 233 7 0.8844089 0.6060642 0.543737 0.7823390 0.6533608 0.755566 0.747400 0.6192981 0.5853110 0.7608265 0.8132014 0.3994363 0.4168470 0.7167582 0.5551547 0.553397 0.4259259 0.394146 0.3335796 0.673894 0.8908819 0.5082660 0.739914 0.8032709 0.8266170 0.7383937 0.698156 0.711730 0.735696 0.6003016 0.7332701 0.8072286 0.0299023 0.0192044 0.0152505 0.02095024 0.2374753 0.0011647 0.5415923 0.7126628 0.7220136 0.4955701 0.592000 4 0.643898 0.720196 -8.1826e-02 7 0.661456 0.699252 -0.03779557 0.9199383 0.01083637 weaklyHypometh 1.0000 0.603253 insignificant 0.972045 7.7634e-04 weaklyHypometh 1 0.189149 insignificant -0.1015974 0.0403518 weaklyHypometh 1 insignificant 0.643898 0.0599343 0.58296616 7 0.661456 0.061507 0.59994867 2.7470e-41 1.0000e+00 hypermethylated 3.0522e-39 1.0000e+00 hypermethylated 5.8096e-18 1.0000e+00 hypermethylated 1.4524e-15 1.0000000 hypermethylated 0.54479338 2.7318e-07 hypermethylated 2.1014e-05 hypermethylated 0.643898 0.602578 0.0224114 7 0.661456 0.624496 0.03695960 3.1414e-01 8.6545e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.4014e-01 5.3601e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.03287320 0.61474687 insignificant 1.000000 insignificant 0.720196 0.0599343 0.65954776 7 0.699252 0.061507 0.6377442 7.8228e-49 1.0000e+00 hypermethylated 1.9557e-46 1.0000000 hypermethylated 1.7121e-17 1.00000000 hypermethylated 5.7070e-15 1.00000 hypermethylated 0.64639076 5.2539e-07 hypermethylated 3.3189e-05 hypermethylated 0.720196 0.602578 0.1133002 7 0.699252 0.624496 0.0747552 5.0700e-04 9.8559e-01 weaklyHypermeth 2.7890e-02 1.0000e+00 weaklyHypermeth 3.2839e-03 9.0934e-01 weaklyHypermeth 0.18243772 1.0000000 insignificant 0.06872418 2.6912e-01 insignificant 1.000000 insignificant 0.0599343 0.6025779 -0.5409281 7 0.061507 0.624496 -0.5629891 1.0000e+00 1.4602e-25 hypomethylated 1.0000e+00 2.9204e-23 hypomethylated 1.0000e+00 1.8905e-11 hypomethylated 1.0000e+00 6.3016e-09 hypomethylated -0.57766658 1.6301e-05 hypomethylated 1.6301e-03 hypomethylated chr2 238039289 238040289 10661 ENSG00000222032 0.6308633 55 5 0.724170 52 3 0.1562500 20 1 0.6904762 22 3 0.600000 8 0 0.711538 41 3 0.350000 10 0 0.739774 84 5 0.625000 8 0 0.759259 18 1 0.729512 124 6 1.0000000 1 0 0.801716 101 5 0.944444 14 2 0.5833333 17 1 0.000000 1 0 0.062500 7 0 0.5341270 40 5 0.8277778 45 4 0.843838 33 2 0.746825 47 5 0.7803571 42 4 0.6530612 29 4 0.6416667 13 2 0.7712607 57 4 0.9093083 137 6 0.677778 26 3 0.388571 18 2 0.7215822 65 4 0.946143 156 6 0.7773702 153 6 0.6718855 45 4 0.5505291 95 6 0.4217285 108 5 0.6250000 84 4 0.0949074 36 4 0.404762 18 1 0.6714021 131 6 0.521645 29 2 0.818302 59 4 0.933333 8 0 0.700000 8 1 0.642857 18 1 0.6203209 0.7121212 0.170455 0.6515152 0.5454545 0.874126 0.454545 0.7977023 0.7727273 0.7676768 0.8908868 0.8026982 0.8919987 0.8430637 0.4545455 0.348153 0.1136364 0.665224 0.7500000 0.788388 0.6623377 0.6996753 0.675325 0.4232758 0.7424242 0.8420050 0.621212 0.077922 0.803519 0.9130435 0.9263785 0.8132231 0.2943723 0.3540317 1.0000000 0.20202020 0.6666667 0.9303030 0.6446281 0.6652237 0.8484848 0.9090909 0.727273 0 0.756098 0.840967 -7.9502e-02 2 0.677978 0.799320 -0.12134105 0.9999054 0.00102044 lowCoverage 1.0000 0.170073 lowCoverage 0.992931 6.6207e-02 lowCoverage 1 1.000000 lowCoverage -0.1080884 0.1541969 lowCoverage 1 lowCoverage 0.756098 0.6234043 0.17307446 2 0.677978 0.518768 0.15921046 6.4007e-05 5.7871e-01 lowCoverage 8.6496e-04 1.0000e+00 lowCoverage 8.3128e-02 9.7115e-01 lowCoverage 7.2920e-01 1.0000000 lowCoverage 0.15434082 1.7052e-01 lowCoverage 1.0000e+00 lowCoverage 0.756098 0.721311 0.0143035 2 0.677978 0.682647 -0.00466821 5.2886e-01 1.1433e-02 lowCoverage 1.0000e+00 5.8025e-01 lowCoverage 9.1619e-01 1.9675e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage -0.10749851 0.27687124 lowCoverage 1.000000 lowCoverage 0.838832 0.6207627 0.24840558 6 0.699405 0.453922 0.2454826 8.8531e-09 9.9824e-01 hypermethylated 1.7359e-07 1.0000000 hypermethylated 3.8825e-03 0.99890969 weaklyHypermeth 5.5465e-02 1.00000 weaklyHypermeth 0.26242926 2.6014e-02 lowCoverage 3.6908e-01 lowCoverage 0.840967 0.721311 0.0999157 2 0.799320 0.682647 0.1166728 2.9643e-02 8.0090e-01 lowCoverage 5.9286e-01 1.0000e+00 lowCoverage 5.4337e-01 4.0419e-01 lowCoverage 1.00000000 1.0000000 lowCoverage 0.00058993 9.9446e-01 lowCoverage 1.000000 lowCoverage 0.6234043 0.7213115 -0.1579286 2 0.518768 0.682647 -0.1638787 9.9936e-01 3.4204e-02 lowCoverage 1.0000e+00 3.0269e-01 lowCoverage 9.9996e-01 7.9592e-02 lowCoverage 1.0000e+00 7.5802e-01 lowCoverage -0.26183933 4.2697e-02 lowCoverage 5.0830e-01 lowCoverage chr2 238048489 238049489 10662 ENSG00000222032 0.0363365 1246 47 0.035384 1561 61 0.0266223 2503 59 0.0334734 882 33 0.028892 579 33 0.062895 1526 53 0.022844 1198 33 0.068783 679 31 0.045273 965 33 0.039081 1023 31 0.050868 1128 35 0.0339081 919 28 0.045685 895 31 0.500000 4 0 0.0395368 934 31 0.063657 864 30 0.011159 820 31 0.0227542 986 43 0.0379490 793 32 0.062317 1376 45 0.060452 381 28 0.0063801 598 28 0.0498834 1350 61 0.0114014 401 27 0.0574784 497 25 0.0348181 1961 62 0.046278 621 32 0.021247 428 28 0.0586578 582 33 0.040995 1974 62 0.0472806 1823 62 0.0426900 1718 56 0.0176570 1457 63 0.0388116 704 33 0.0399395 995 42 0.0150714 564 30 0.079254 383 28 0.0144244 1595 58 0.033387 1554 47 0.026227 1353 40 0.042317 876 30 0.043894 1260 33 0.029431 1140 36 0.0212862 0.0197033 0.021879 0.0124315 0.0079996 0.044921 0.013342 0.0129645 0.0167929 0.0135827 0.0199896 0.0093836 0.0083371 NA 0.0170307 0.027316 0.0125621 0.013815 0.0106916 0.030671 0.0418042 0.0102118 0.047543 0.0118019 0.0260758 0.0160200 0.018682 0.018673 0.021711 0.0250123 0.0163046 0.0181770 0.0056846 0.0089346 0.0101340 0.00260261 0.0263069 0.0104430 0.0140924 0.0103450 0.0080765 0.0128275 0.023024 23 0.028686 0.037070 -7.5522e-03 39 0.032718 0.038240 -0.00552137 0.9968056 0.40416608 insignificant 1.0000 1.000000 insignificant 0.999534 8.5332e-01 insignificant 1 1.000000 insignificant 0.0235740 0.3335073 insignificant 1 insignificant 0.028686 0.0351000 0.00967427 39 0.032718 0.028050 0.00466853 3.6567e-01 9.9986e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.1916e-01 1.0000e+00 insignificant 1.0000e+00 1.0000000 insignificant 0.02917800 2.6157e-01 insignificant 1.0000e+00 insignificant 0.028688 0.027333 0.0032913 30 0.033222 0.026076 0.00714570 8.3150e-01 1.0000e+00 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9002e-01 1.0000e+00 insignificant 1.0000e+00 1.0000000 insignificant 0.02831999 0.24222192 insignificant 1.000000 insignificant 0.037070 0.0351000 0.01667212 55 0.038240 0.028050 0.0101899 2.5708e-01 9.9942e-01 insignificant 1.0000e+00 1.0000000 insignificant 5.1363e-01 0.99999996 insignificant 1.0000e+00 1.00000 insignificant 0.00560395 6.3809e-01 insignificant 1.0000e+00 insignificant 0.037079 0.027333 0.0133697 30 0.038828 0.026076 0.0127520 3.9575e-01 1.0000e+00 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7210e-01 1.0000e+00 insignificant 1.00000000 1.0000000 insignificant 0.00474594 4.6144e-01 insignificant 1.000000 insignificant 0.0351062 0.0273330 -0.0128957 30 0.028481 0.026076 0.0024053 9.9984e-01 9.9924e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.0000e+00 9.9951e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00085801 9.3904e-01 insignificant 1.0000e+00 insignificant chr2 238276689 238277689 10670 LRRFIP1 ENSG00000124831 0.8302471 545 8 0.727860 323 9 0.7631915 226 9 0.7659713 464 8 0.868161 217 9 0.801735 563 9 0.880860 332 9 0.795263 284 8 0.835467 272 10 0.874299 214 10 0.785625 521 10 0.7231310 145 10 0.693407 209 9 0.916171 116 6 0.7938193 305 9 0.953209 143 9 0.666265 74 3 0.6051008 778 8 0.8927668 457 9 0.893736 388 7 0.807255 160 9 0.6330643 84 5 0.8183470 215 8 0.6999115 122 8 0.8137602 358 6 0.8274041 520 10 0.823347 174 8 0.682963 110 6 0.6030742 266 7 0.807749 383 9 0.8416117 368 9 0.8353593 477 8 0.5362893 271 9 0.3932964 240 9 0.7515136 506 9 0.5000000 2 0 0.581056 243 9 0.3385986 576 9 0.770476 426 8 0.748899 358 8 0.845153 417 8 0.691145 303 8 0.839483 444 8 0.8516510 0.8035053 0.843447 0.8399790 0.8890584 0.916669 0.871845 0.8567697 0.8864311 0.8751255 0.8792055 0.7236531 0.8193641 0.9240307 0.8987138 0.863692 0.6964740 0.604349 0.9271300 0.890214 0.9132644 0.6042388 0.869545 0.8219293 0.8942216 0.8711749 0.801321 0.830483 0.700013 0.9249904 0.8842505 0.9002577 0.4377692 0.3377518 0.9364229 0.50291970 0.5861412 0.1419810 0.7792401 0.7445019 0.8297027 0.6052301 0.786538 5 0.793644 0.829728 -2.0006e-02 9 0.739830 0.681609 0.05822078 0.0501729 0.90241986 insignificant 1.0000 1.000000 insignificant 0.380938 9.8971e-01 insignificant 1 1.000000 insignificant 0.0371605 0.2567258 insignificant 1 insignificant 0.793644 0.4445049 0.37702263 9 0.739830 0.516514 0.22331613 3.1802e-19 1.0000e+00 hypermethylated 1.4455e-17 1.0000e+00 hypermethylated 6.9832e-05 9.9953e-01 hypermethylated 1.4858e-03 1.0000000 hypermethylated 0.28652201 3.6173e-03 weaklyHypermeth 8.6126e-02 weaklyHypermeth 0.794454 0.632957 0.1076994 8 0.824279 0.782541 0.04173791 4.5766e-03 3.6275e-01 weaklyHypermeth 1.9898e-01 1.0000e+00 insignificant 4.2366e-04 3.3501e-01 weaklyHypermeth 4.0386e-02 1.0000000 weaklyHypermeth 0.02428300 0.50941356 insignificant 1.000000 insignificant 0.829728 0.4445049 0.40357387 9 0.681609 0.516514 0.1650954 7.0521e-14 9.4998e-01 hypermethylated 2.3507e-12 1.0000000 hypermethylated 4.0062e-04 0.94803318 hypermethylated 8.1759e-03 1.00000 hypermethylated 0.24936152 6.6131e-03 weaklyHypermeth 1.2967e-01 insignificant 0.831938 0.632957 0.1296412 8 0.819425 0.782541 0.0368842 1.6252e-04 2.0036e-02 weaklyHypermeth 1.1609e-02 1.0000e+00 weaklyHypermeth 1.3814e-02 3.8039e-01 weaklyHypermeth 0.57560279 1.0000000 insignificant -0.01287749 7.4252e-01 insignificant 1.000000 insignificant 0.4440807 0.6329569 -0.3007967 8 0.504801 0.782541 -0.2777397 9.9978e-01 1.4033e-09 hypomethylated 1.0000e+00 5.6132e-08 hypomethylated 9.9788e-01 9.0814e-03 weaklyHypometh 1.0000e+00 1.4415e-01 insignificant -0.26223901 5.3038e-03 weaklyHypometh 1.2936e-01 insignificant chr2 238276989 238277989 10671 LRRFIP1 ENSG00000124831 0.8090280 544 8 0.771697 314 8 0.7680821 212 8 0.7659713 464 8 0.877322 203 8 0.811452 556 8 0.867622 325 8 0.828070 280 8 0.828104 261 9 0.861729 205 9 0.780854 503 9 0.7204441 133 9 0.711193 194 8 0.916171 116 6 0.7847992 297 8 0.948010 138 8 0.641655 57 2 0.5612232 777 8 0.9028001 441 8 0.881929 386 7 0.806731 144 8 0.6330643 84 5 0.7956404 212 8 0.7159510 113 7 0.8137602 358 6 0.8267453 508 9 0.813765 164 7 0.654141 102 5 0.6330454 263 7 0.808523 373 8 0.8425315 362 8 0.8203919 473 8 0.5165849 256 8 0.4040546 226 8 0.7655707 490 8 0.5000000 2 0 0.584928 230 8 0.2849585 568 8 0.804285 424 8 0.795073 355 8 0.845153 417 8 0.652539 302 8 0.819419 443 8 0.8516510 0.8035053 0.843447 0.8399790 0.8890584 0.916669 0.871845 0.8567697 0.8864311 0.8751255 0.8792055 0.7236531 0.8193641 0.9240307 0.8987138 0.863692 0.6964740 0.604349 0.9271300 0.890214 0.9132644 0.6042388 0.869545 0.8219293 0.8942216 0.8711749 0.801321 0.830483 0.700013 0.9249904 0.8842505 0.9002577 0.4377692 0.3377518 0.9364229 0.50291970 0.5861412 0.1419810 0.7792401 0.7445019 0.8297027 0.6052301 0.786538 5 0.794255 0.830111 -1.9382e-02 8 0.737267 0.670509 0.06675806 0.0324254 0.93517585 inconclusive 1.0000 1.000000 insignificant 0.325965 9.9229e-01 insignificant 1 1.000000 insignificant 0.0382169 0.2346820 insignificant 1 insignificant 0.794255 0.4390519 0.38296566 8 0.737267 0.510314 0.22695254 1.0084e-18 9.9999e-01 hypermethylated 4.0335e-17 1.0000e+00 hypermethylated 1.9933e-04 9.9862e-01 hypermethylated 4.1527e-03 1.0000000 hypermethylated 0.29255833 5.6740e-03 weaklyHypermeth 1.1126e-01 insignificant 0.795088 0.633179 0.1072464 8 0.830245 0.805998 0.02424660 1.2438e-02 2.5457e-01 weaklyHypermeth 3.6590e-01 1.0000e+00 insignificant 2.8906e-04 2.6705e-01 weaklyHypermeth 3.6132e-02 1.0000000 weaklyHypermeth 0.01861407 0.65334184 insignificant 1.000000 insignificant 0.830111 0.4390519 0.40822047 8 0.670509 0.510314 0.1601945 3.4670e-13 9.1037e-01 hypermethylated 1.0506e-11 1.0000000 hypermethylated 1.0270e-03 0.90855934 weaklyHypermeth 1.8017e-02 1.00000 weaklyHypermeth 0.25434145 1.0496e-02 weaklyHypermeth 1.9437e-01 insignificant 0.832379 0.633179 0.1289732 8 0.819938 0.805998 0.0139396 4.9791e-04 9.6369e-03 weaklyHypermeth 2.7890e-02 7.4130e-01 weaklyHypermeth 1.0120e-02 3.1553e-01 weaklyHypermeth 0.43998313 1.0000000 insignificant -0.01960281 6.4554e-01 insignificant 1.000000 insignificant 0.4385965 0.6331788 -0.3026167 8 0.495234 0.805998 -0.3107642 9.9995e-01 4.8759e-10 hypomethylated 1.0000e+00 2.0316e-08 hypomethylated 9.9644e-01 7.3852e-03 weaklyHypometh 1.0000e+00 1.2309e-01 insignificant -0.27394426 7.3989e-03 weaklyHypometh 1.5414e-01 insignificant chr2 238681189 238682189 10682 ESPNL ENSG00000144488 0.9160428 142 5 0.835687 120 5 0.8676100 113 5 0.8751804 161 5 0.797403 59 4 0.964864 172 5 0.792763 129 5 0.826500 102 4 0.932329 122 4 0.884470 69 4 0.915478 155 5 0.9133333 37 2 0.600952 94 4 1.000000 6 0 0.9301587 48 4 0.929412 30 1 0.880208 70 4 0.8762637 178 5 0.8466106 92 5 0.848350 175 5 0.926984 42 4 0.7809452 107 4 0.8920261 92 5 0.9396364 66 5 0.8394643 131 5 0.9246753 139 5 0.957143 66 5 0.631746 73 5 0.8233696 102 5 0.828631 199 5 0.9230567 177 5 0.9425056 192 5 0.7288894 158 5 0.6482906 67 5 0.7882353 150 4 0.6030303 40 2 0.715228 139 5 0.6939144 251 5 0.911109 183 5 0.912433 125 5 0.826157 127 5 0.890434 142 5 0.852594 146 5 0.9142429 0.8215061 0.892225 0.8967304 0.8591574 0.956027 0.811224 0.8320488 0.8648570 0.9254527 0.8956817 0.9344715 0.6292915 0.9675241 0.8658924 0.826112 0.8168231 0.880890 0.8297903 0.849887 0.8689121 0.7802560 0.862968 0.9124967 0.8146603 0.8938232 0.894425 0.894201 0.850862 0.8511231 0.8630241 0.9249387 0.7454769 0.6327809 0.9423242 0.65787140 0.8703802 0.6302185 0.9217826 0.8997457 0.8407947 0.8894335 0.858705 4 0.867342 0.877345 -3.8803e-03 5 0.768753 0.636736 0.13201728 0.9873185 0.66941299 insignificant 1.0000 1.000000 insignificant 0.912191 8.0564e-01 insignificant 1 1.000000 insignificant 0.0041655 0.9002105 lowCoverage 1 lowCoverage 0.867761 0.7577640 0.10329920 5 0.896878 0.633597 0.26328154 3.0642e-04 1.0000e+00 weaklyHypermeth 3.5221e-03 1.0000e+00 weaklyHypermeth 5.8700e-03 9.9980e-01 weaklyHypermeth 8.3280e-02 1.0000000 weaklyHypermeth 0.17541617 2.4092e-04 lowCoverage 1.0475e-02 lowCoverage 0.867697 0.872752 -0.0174946 5 0.876254 0.881524 -0.00526995 7.3152e-01 4.9742e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.9260e-01 6.9065e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.00686447 0.78878054 lowCoverage 1.000000 lowCoverage 0.877978 0.7577640 0.11049126 5 0.742858 0.633597 0.1092614 5.2387e-04 1.0000e+00 weaklyHypermeth 5.9530e-03 1.0000000 weaklyHypermeth 6.6051e-03 0.99981721 weaklyHypermeth 8.5780e-02 1.00000 weaklyHypermeth 0.17125070 4.6978e-04 lowCoverage 1.5659e-02 lowCoverage 0.878613 0.872752 -0.0104819 5 0.891430 0.881524 0.0099059 4.6097e-01 4.2336e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.8134e-01 6.0632e-01 insignificant 1.00000000 1.0000000 insignificant -0.01102995 7.3472e-01 lowCoverage 1.000000 lowCoverage 0.7587065 0.8727524 -0.1212756 5 0.760316 0.881524 -0.1212078 9.9990e-01 3.4141e-03 weaklyHypometh 1.0000e+00 4.0166e-02 weaklyHypometh 9.9961e-01 2.0907e-02 weaklyHypometh 1.0000e+00 2.8253e-01 insignificant -0.18228064 3.5950e-04 lowCoverage 2.2469e-02 lowCoverage chr2 238711789 238712789 10683 KLHL30 ENSG00000168427 0.9036006 395 15 0.684602 420 15 0.7844423 563 15 0.8874392 495 15 0.707455 397 14 0.793406 699 15 0.768104 383 14 0.748297 433 14 0.725498 500 14 0.782010 659 14 0.866746 638 14 0.7500300 255 14 0.722717 582 14 0.845404 382 12 0.7259593 641 14 0.790832 174 11 0.513072 69 6 0.7775950 614 14 0.7231358 736 15 0.832822 467 15 0.724631 242 13 0.6486117 364 14 0.8897348 353 15 0.6521989 321 14 0.8528758 317 14 0.8626717 566 16 0.728294 503 14 0.751489 238 14 0.7953404 622 14 0.798327 653 16 0.8415085 639 17 0.9132780 564 16 0.6393331 420 15 0.5748462 383 14 0.6849869 505 15 0.4733003 195 11 0.557555 323 16 0.5200434 770 16 0.680518 424 15 0.691547 469 16 0.647270 347 14 0.601070 485 15 0.763173 420 14 0.9207829 0.7759905 0.837399 0.8755349 0.8071663 0.874946 0.863595 0.8445969 0.8467710 0.9126627 0.8796208 0.7941508 0.8154778 0.8526389 0.8487042 0.805627 0.7276579 0.761392 0.7924634 0.890273 0.8620774 0.6065134 0.913867 0.8025840 0.8939684 0.8793465 0.831572 0.796719 0.867258 0.8494918 0.8356058 0.9439442 0.6945217 0.6171499 0.7630835 0.39692820 0.7414199 0.5524028 0.6345029 0.6770294 0.7361913 0.6582409 0.755079 14 0.837192 0.837642 -5.8146e-03 14 0.703766 0.725081 -0.02131570 0.8687673 0.02781116 weaklyHypometh 1.0000 0.897134 insignificant 0.965109 1.9680e-02 weaklyHypometh 1 0.937164 insignificant -0.0215883 0.5043639 insignificant 1 insignificant 0.837263 0.5868979 0.21404355 14 0.713469 0.540341 0.17312836 1.3029e-27 1.0000e+00 hypermethylated 7.6640e-26 1.0000e+00 hypermethylated 1.1608e-08 9.9970e-01 hypermethylated 6.1096e-07 1.0000000 hypermethylated 0.19164760 5.6726e-04 weaklyHypermeth 2.0946e-02 weaklyHypermeth 0.837895 0.681903 0.1587093 14 0.719142 0.694035 0.02510717 6.7227e-21 9.9368e-01 weaklyHypermeth 6.7227e-18 1.0000e+00 weaklyHypermeth 5.3514e-10 9.9923e-01 weaklyHypermeth 2.6757e-07 1.0000000 weaklyHypermeth 0.08994282 0.02377266 weaklyHypermeth 0.819747 insignificant 0.838265 0.5866718 0.22468315 15 0.761445 0.515780 0.2456655 3.7848e-17 1.0000e+00 hypermethylated 1.5139e-15 1.0000000 hypermethylated 7.7221e-08 0.99999999 hypermethylated 4.2900e-06 1.00000 hypermethylated 0.21323593 2.3785e-04 hypermethylated 9.1481e-03 hypermethylated 0.838879 0.681585 0.1661088 15 0.773498 0.660986 0.1125122 1.0260e-11 9.9999e-01 weaklyHypermeth 5.1300e-09 1.0000e+00 weaklyHypermeth 2.6039e-07 1.0000e+00 weaklyHypermeth 0.00023763 1.0000000 weaklyHypermeth 0.11153115 1.1435e-02 weaklyHypermeth 0.762366 insignificant 0.5921875 0.6814366 -0.0593110 15 0.557063 0.644035 -0.0869717 9.6152e-01 3.3520e-03 weaklyHypometh 1.0000e+00 3.9904e-02 weaklyHypometh 9.8167e-01 6.2090e-02 insignificant 1.0000e+00 6.4011e-01 insignificant -0.10170478 3.6335e-02 weaklyHypometh 4.5994e-01 insignificant chr2 238858789 238859789 10688 PER2 ENSG00000132326 0.6972302 216 5 0.579081 348 6 0.5592246 120 5 0.6162329 215 5 0.605021 92 6 0.513204 311 5 0.578889 104 5 0.643427 139 5 0.574395 169 5 0.734929 102 5 0.743272 306 6 0.7184211 60 4 0.246881 193 5 0.597155 135 5 0.5081190 202 5 0.900000 71 2 0.989924 397 1 0.4880086 231 5 0.6106496 212 6 0.587424 217 5 0.835544 76 5 0.1682817 110 5 0.7265873 110 5 0.6617715 147 6 0.6842857 61 4 0.4809557 262 6 0.462686 162 6 0.542903 76 4 0.5436023 196 5 0.375525 389 6 0.2980367 365 6 0.8482258 192 5 0.2228175 224 6 0.1469400 76 5 0.1900000 145 4 0.5000000 3 0 0.170184 348 5 0.5455465 247 5 0.084596 187 5 0.213578 158 5 0.149370 164 5 0.389737 177 5 0.421715 170 5 0.7115022 0.6356105 0.597586 0.5935064 0.6782845 0.655354 0.628451 0.7158070 0.5762645 0.6682250 0.7976905 0.6792809 0.3552204 0.6093003 0.4986608 0.950704 NA 0.529377 0.6676307 0.537125 0.7762992 0.1748972 0.748759 0.6742846 0.6430584 0.5569609 0.538934 0.595661 0.609997 0.4566354 0.3422107 0.8608450 0.1817488 0.1043115 0.1222379 0.71558294 0.2493052 0.7669949 0.0763717 0.3087307 0.1485502 0.3482325 0.312649 4 0.657292 0.526561 1.1496e-01 5 0.593567 0.477107 0.11646035 0.0005312 0.99986800 weaklyHypermeth 0.5312 1.000000 insignificant 0.114373 9.9232e-01 insignificant 1 1.000000 insignificant 0.0722074 0.3136755 lowCoverage 1 lowCoverage 0.657292 0.2981783 0.35180271 5 0.593567 0.273587 0.31998027 3.7392e-11 1.0000e+00 hypermethylated 7.3318e-10 1.0000e+00 hypermethylated 1.4108e-06 1.0000e+00 hypermethylated 4.8648e-05 1.0000000 hypermethylated 0.32865974 4.1378e-03 lowCoverage 9.0923e-02 lowCoverage 0.657292 0.242991 0.4170907 5 0.593567 0.214819 0.37874799 5.5659e-16 1.0000e+00 hypermethylated 2.7829e-13 1.0000e+00 hypermethylated 2.6217e-11 1.0000e+00 hypermethylated 2.6217e-08 1.0000000 hypermethylated 0.37277522 0.00209316 lowCoverage 0.237810 lowCoverage 0.526561 0.2981783 0.23053968 5 0.477107 0.273587 0.2035199 1.1174e-04 9.9996e-01 hypermethylated 1.4325e-03 1.0000000 hypermethylated 8.2199e-05 0.99999809 hypermethylated 2.0550e-03 1.00000 hypermethylated 0.25645231 1.9223e-02 lowCoverage 3.0513e-01 lowCoverage 0.526561 0.242991 0.2925994 5 0.477107 0.214819 0.2622876 2.7338e-07 1.0000e+00 hypermethylated 5.4675e-05 1.0000e+00 hypermethylated 4.7526e-07 1.0000e+00 hypermethylated 0.00023763 1.0000000 hypermethylated 0.30056780 6.7020e-03 weaklyHypermeth 0.557711 insignificant 0.2981783 0.2429907 0.0593589 5 0.273587 0.214819 0.0587677 8.4061e-02 8.5565e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.4437e-01 5.8310e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.04411548 6.6439e-01 lowCoverage 1.0000e+00 lowCoverage chr2 239502633 239503633 10704 ENSG00000201897 0.9217626 117 6 0.871025 151 6 0.9366318 121 6 0.9258113 62 3 0.388889 8 0 0.857143 30 2 1.000000 9 0 0.778388 41 3 0.811966 37 3 0.969697 33 3 1.000000 24 3 0.9629630 26 3 0.926641 42 3 NA 0 0 0.8630952 22 3 0.944444 18 3 1.000000 18 3 0.9937888 82 3 NA 0 0 0.733333 34 4 0.000000 4 0 0.7037037 17 2 1.0000000 22 3 0.5555556 12 2 0.8750000 19 2 0.9885057 167 5 0.555556 9 0 0.171429 12 2 0.9611111 54 3 0.944048 112 7 0.9565821 175 5 0.9833333 54 4 0.3200000 34 3 NA 0 0 0.4611905 129 4 0.4285714 21 3 0.305556 9 0 0.7888252 138 6 0.891049 99 6 0.973710 130 6 0.933621 170 5 0.863636 66 6 0.950352 186 7 0.9831933 0.9367347 1.000000 0.8674136 0.3333333 0.857143 1.000000 0.7723705 0.7664835 1.0000000 1.0000000 0.9047619 0.9334416 NA 0.9821429 0.976190 1.0000000 0.993789 NA 0.514286 0.0000000 0.7380952 NA 0.5714286 0.8571429 1.0000000 0.642857 0.151020 0.990476 0.9142857 0.9053571 1.0000000 0.8571429 NA 0.0535714 0.19387755 0.6071429 0.7928571 0.8428571 0.9538690 0.9337068 0.8831169 0.973214 0 0.901602 0.914764 -5.6197e-03 3 0.909707 0.934414 -0.02470673 0.9487121 0.07197726 lowCoverage 1.0000 1.000000 lowCoverage 0.469544 8.3611e-01 lowCoverage 1 1.000000 lowCoverage 0.1579636 0.1528797 lowCoverage 1 lowCoverage 0.901602 0.5498489 0.34813773 1 0.909707 0.629874 0.27983279 1.9825e-11 1.0000e+00 lowCoverage 4.2181e-10 1.0000e+00 lowCoverage 1.7785e-05 1.0000e+00 lowCoverage 4.9404e-04 1.0000000 lowCoverage 0.42170365 5.5779e-03 lowCoverage 1.1126e-01 lowCoverage 0.901602 0.927803 -0.0200690 3 0.909707 0.927209 -0.01750206 8.6912e-01 1.7326e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 5.2365e-01 9.1087e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage -0.03994162 0.32738687 lowCoverage 1.000000 lowCoverage 0.914764 0.5498489 0.37466627 3 0.934414 0.629874 0.3045395 3.8374e-07 1.0000e+00 lowCoverage 6.3956e-06 1.0000000 lowCoverage 9.5411e-04 0.99999986 lowCoverage 1.7128e-02 1.00000 lowCoverage 0.26374007 6.6476e-02 lowCoverage 7.3050e-01 lowCoverage 0.914764 0.927803 -0.0103849 5 0.934414 0.927209 0.0072047 3.7165e-01 8.7335e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.4243e-01 7.3717e-01 insignificant 1.00000000 1.0000000 insignificant -0.19790520 7.2820e-02 lowCoverage 1.000000 lowCoverage 0.5498489 0.9278034 -0.3718464 3 0.629874 0.927209 -0.2973349 9.9919e-01 4.0293e-06 lowCoverage 1.0000e+00 9.5935e-05 lowCoverage 9.9993e-01 4.3244e-04 lowCoverage 1.0000e+00 1.2710e-02 lowCoverage -0.46164527 5.1254e-03 lowCoverage 1.2814e-01 lowCoverage chr2 239589533 239590533 10710 ENSG00000211566 0.9408394 493 9 0.821820 265 11 0.7908748 139 9 0.8470310 530 10 0.924603 86 8 0.942264 383 9 0.755023 145 9 0.917970 242 9 0.943506 114 5 0.974969 113 7 0.955786 381 11 0.9106061 30 2 0.963134 179 5 1.000000 7 0 0.9210824 143 5 0.935185 24 0 0.746667 23 3 0.6904312 336 7 0.9544335 149 7 0.955507 279 9 0.941626 91 7 0.8854718 134 7 0.9448140 168 9 0.9416209 85 7 0.9526984 155 9 0.9295940 375 11 0.853836 103 7 0.702137 51 5 0.9440786 245 7 0.968216 338 9 0.9157625 355 9 0.8807584 438 9 0.0194594 231 9 0.0731025 187 7 0.1687243 198 5 0.1160908 283 9 0.055877 215 10 0.1074435 351 9 0.873938 412 9 0.915263 573 10 0.897936 563 10 0.894685 327 7 0.832692 697 10 0.9090016 0.8615780 0.752992 0.9249472 0.9150055 0.922032 0.804356 0.9227531 0.8940338 0.9631038 0.9313886 0.8304264 0.9337229 0.9443050 0.8878266 0.895833 0.7930421 0.767312 0.9329240 0.934427 0.9251397 0.8625504 0.935831 0.9225179 0.9646346 0.9559895 0.816430 0.753913 0.951407 0.9604891 0.9344728 0.9581425 0.0226907 0.0851856 0.2416740 0.08868257 0.0698473 0.1079973 0.8935294 0.9057605 0.8878149 0.9110008 0.800782 3 0.910547 0.932203 -2.3050e-02 9 0.900129 0.923502 -0.02337345 0.9567636 0.00523321 weaklyHypometh 1.0000 0.500565 insignificant 0.914251 2.2742e-01 insignificant 1 1.000000 insignificant -0.0104644 0.7174501 insignificant 1 insignificant 0.910323 0.1023891 0.78883521 9 0.835834 0.078240 0.75759426 1.0664e-117 1.0000e+00 hypermethylated 1.0664e-114 1.0000e+00 hypermethylated 2.3719e-26 1.0000e+00 hypermethylated 2.3719e-23 1.0000000 hypermethylated 0.80447036 7.2034e-14 hypermethylated 1.8009e-11 hypermethylated 0.910820 0.884870 0.0283514 9 0.908473 0.890801 0.01767164 1.0264e-01 9.8574e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.1520e-02 9.9619e-01 weaklyHypermeth 5.7599e-01 1.0000000 insignificant 0.01168390 0.63412638 insignificant 1.000000 insignificant 0.932203 0.1024590 0.81283980 9 0.923502 0.084258 0.8392442 2.4057e-88 1.0000e+00 hypermethylated 2.4057e-85 1.0000000 hypermethylated 9.2439e-22 1.00000000 hypermethylated 8.0338e-19 1.00000 hypermethylated 0.81493476 3.0738e-13 hypermethylated 3.0738e-10 hypermethylated 0.932150 0.884870 0.0536038 9 0.917127 0.890801 0.0263262 6.1690e-05 9.9942e-01 weaklyHypermeth 5.6082e-03 1.0000e+00 weaklyHypermeth 5.2032e-04 9.9963e-01 weaklyHypermeth 0.05203158 1.0000000 weaklyHypermeth 0.02214829 3.9401e-01 insignificant 1.000000 insignificant 0.1025290 0.8848697 -0.7654754 9 0.091280 0.890801 -0.7995217 1.0000e+00 1.1744e-46 hypomethylated 1.0000e+00 1.1744e-43 hypomethylated 1.0000e+00 7.3123e-14 hypomethylated 1.0000e+00 4.0440e-11 hypomethylated -0.79278647 6.3572e-10 hypomethylated 6.3572e-07 hypomethylated chr2 239611633 239612633 10712 ENSG00000211566 0.6955882 77 6 0.875000 17 2 0.5571096 60 6 0.7956349 52 6 0.776852 49 4 0.772449 50 6 0.817678 89 6 0.617593 54 6 0.684930 62 6 0.834921 72 6 0.896902 93 6 0.7319728 48 6 0.738095 25 2 0.750000 12 0 0.8563492 46 6 1.000000 14 2 1.000000 2 0 0.7542827 81 5 0.9345238 46 6 0.867857 50 6 0.716667 24 3 0.7248677 76 6 0.6166667 37 4 0.8750000 27 3 0.6236858 73 6 0.7916667 34 2 0.597362 72 5 0.928571 12 0 0.7777778 26 3 0.819048 29 3 0.7388889 20 1 0.9485294 64 6 0.1949074 66 6 0.0694444 108 6 0.3257576 79 6 0.2000000 5 0 0.297980 37 3 0.2967721 102 6 0.780282 67 6 0.923611 23 2 0.778571 49 6 0.620671 63 6 0.587775 52 6 0.7145329 0.8039216 0.535856 0.7875817 0.7570806 0.811858 0.792938 0.5906318 0.7529497 0.8380019 0.8950478 0.8445378 0.8562092 0.7058824 0.8585434 1.000000 0.8841298 0.751712 0.9229692 0.860224 0.8788216 0.7086102 0.823529 0.8529412 0.7269544 0.8692810 0.798001 0.901961 0.764706 0.7647059 0.7732026 0.9394464 0.2047930 0.0816993 0.3832442 0.36072791 0.0846702 0.3001240 0.7939658 0.9101307 0.7983193 0.6375095 0.618671 0 0.777778 0.795132 -9.6027e-03 5 0.766681 0.687422 0.07925901 0.4337725 0.53013282 insignificant 1.0000 1.000000 insignificant 0.636017 6.3428e-01 insignificant 1 1.000000 insignificant 0.0346593 0.4236127 lowCoverage 1 lowCoverage 0.777778 0.2481013 0.57411638 6 0.766681 0.339471 0.42720933 8.6662e-33 9.9902e-01 hypermethylated 7.8784e-31 1.0000e+00 hypermethylated 4.2979e-11 9.9973e-01 hypermethylated 4.2979e-09 1.0000000 hypermethylated 0.56707664 3.3795e-07 lowCoverage 2.3398e-05 lowCoverage 0.779798 0.724409 0.0776958 6 0.784146 0.711133 0.07301262 3.5892e-03 9.0938e-01 weaklyHypermeth 1.7091e-01 1.0000e+00 insignificant 3.5333e-02 9.6481e-01 weaklyHypermeth 1.0000e+00 1.0000000 insignificant 0.05970476 0.40443098 lowCoverage 1.000000 lowCoverage 0.793522 0.2493703 0.56265373 5 0.611042 0.357308 0.2537336 2.4889e-20 9.9724e-01 hypermethylated 1.1313e-18 1.0000000 hypermethylated 2.0424e-09 0.99810979 hypermethylated 1.4589e-07 1.00000 hypermethylated 0.53241734 2.3867e-07 lowCoverage 1.7048e-05 lowCoverage 0.806653 0.724409 0.0844047 5 0.805451 0.711133 0.0943181 8.5389e-03 8.8234e-01 weaklyHypermeth 2.7278e-01 1.0000e+00 insignificant 2.4590e-02 9.7363e-01 weaklyHypermeth 0.79055659 1.0000000 insignificant 0.02504546 7.3045e-01 lowCoverage 1.000000 lowCoverage 0.2455243 0.7244094 -0.4835405 6 0.230406 0.711133 -0.4807268 1.0000e+00 1.1234e-12 hypomethylated 1.0000e+00 5.6171e-11 hypomethylated 1.0000e+00 4.1569e-07 hypomethylated 1.0000e+00 3.7790e-05 hypomethylated -0.50737188 2.0600e-04 lowCoverage 1.4714e-02 lowCoverage chr2 239882733 239883733 10730 ENSG00000213828 0.7902202 230 6 0.724175 218 6 0.8515604 118 4 0.8718673 172 4 0.772106 83 6 0.803179 248 6 0.840973 130 6 0.762084 113 6 0.623621 101 4 0.853473 89 4 0.852608 348 6 0.7590278 74 3 0.886645 113 4 0.658333 15 2 0.9052642 90 4 0.792125 55 3 0.883838 78 3 0.7262897 165 6 0.9111963 212 6 0.896214 211 6 0.780612 74 4 0.8000000 14 0 0.9378128 125 4 0.8857143 51 6 0.5777778 12 1 0.8096765 306 6 0.985690 76 4 0.571429 39 3 0.8729437 133 4 0.836630 281 6 0.8469437 274 6 0.9097955 317 6 0.9300430 226 6 0.8973958 159 6 1.0000000 71 5 1.0000000 12 2 0.931813 127 6 0.8148234 342 6 0.628831 312 6 0.696176 369 6 0.695448 272 6 0.542014 127 4 0.767345 247 6 0.8062576 0.7464265 0.828275 0.9371976 0.8660266 0.818947 0.884565 0.8581329 0.8759688 0.8640142 0.8360705 0.8616594 0.8861996 0.8295457 0.9141658 0.849571 0.8624892 0.687505 0.9342996 0.904587 0.8608396 0.6977361 0.900206 0.9964912 0.6690058 0.8402196 0.983032 0.982456 0.949054 0.8660675 0.9077373 0.9186198 0.9421999 0.8564503 0.9996559 0.99958575 0.9090692 0.9629998 0.7076694 0.7296994 0.7529070 0.5559949 0.727945 1 0.845616 0.886404 -4.4134e-02 6 0.704886 0.739489 -0.03460261 0.9998333 0.00469703 weaklyHypometh 1.0000 0.500565 insignificant 0.991248 1.4175e-01 insignificant 1 1.000000 insignificant -0.0096787 0.8172369 lowCoverage 1 lowCoverage 0.845616 0.9445037 -0.09811238 6 0.704886 0.806227 -0.10134131 1.0000e+00 2.4910e-07 weaklyHypometh 1.0000e+00 1.2455e-04 weaklyHypometh 1.0000e+00 1.6272e-06 weaklyHypometh 1.0000e+00 0.0016272 weaklyHypometh -0.12077254 5.3673e-03 lowCoverage 1.0954e-01 lowCoverage 0.845912 0.675207 0.1594536 6 0.822367 0.685251 0.13711614 8.0528e-11 9.9999e-01 weaklyHypermeth 2.6843e-08 1.0000e+00 weaklyHypermeth 3.3012e-06 1.0000e+00 weaklyHypermeth 8.2530e-04 1.0000000 weaklyHypermeth 0.14227729 0.01487830 lowCoverage 0.628928 lowCoverage 0.886404 0.9445037 -0.05799714 6 0.739489 0.806227 -0.0667387 9.9873e-01 1.3606e-03 weaklyHypometh 1.0000e+00 0.3401610 insignificant 9.9998e-01 0.00633440 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.11109379 2.9948e-02 lowCoverage 4.1595e-01 lowCoverage 0.886926 0.675207 0.2033826 6 0.862737 0.685251 0.1774859 7.6902e-11 1.0000e+00 hypermethylated 2.5634e-08 1.0000e+00 hypermethylated 6.5468e-05 1.0000e+00 hypermethylated 0.01244204 1.0000000 hypermethylated 0.15195604 1.4718e-02 lowCoverage 0.865775 lowCoverage 0.9455128 0.6752072 0.2640863 6 0.940599 0.685251 0.2553477 3.7486e-11 1.0000e+00 hypermethylated 3.7486e-08 1.0000e+00 hypermethylated 7.9474e-08 1.0000e+00 hypermethylated 7.9474e-05 1.0000e+00 hypermethylated 0.26304983 5.9605e-04 hypermethylated 2.9802e-02 hypermethylated chr2 239898833 239899833 10731 ENSG00000213828 0.8609477 426 13 0.891731 152 11 0.6241883 190 14 0.8819651 411 11 0.954866 100 10 0.936891 543 11 0.838053 141 11 0.838118 155 12 0.889977 172 11 0.874469 182 8 0.904025 282 14 0.7779096 89 7 0.863798 285 14 0.969093 56 3 0.8108055 155 7 0.679330 64 3 0.860031 65 7 0.8721432 497 12 0.8977742 157 13 0.937983 387 11 0.769758 131 10 0.7966218 286 11 0.9462093 262 11 0.8746693 141 10 0.8961840 200 10 0.9078028 195 13 0.860547 160 11 0.886920 155 7 0.7918713 202 14 0.926561 258 14 0.8989564 221 13 0.8662301 417 13 0.2740432 290 14 0.2831867 340 14 0.2834730 267 10 0.5030692 118 11 0.260884 245 13 0.3020128 317 14 0.867902 583 11 0.858645 391 12 0.864876 388 13 0.793964 437 13 0.755884 428 11 0.9065566 0.9534204 0.672675 0.9543291 0.9226527 0.961484 0.932959 0.8739200 0.8989637 0.9315785 0.9526656 0.9164949 0.9442801 0.9446530 0.9198600 0.710872 0.8025632 0.831904 0.9240487 0.933861 0.8498946 0.8487681 0.951294 0.8559842 0.9188648 0.9378874 0.889321 0.914326 0.875856 0.9308040 0.9199611 0.9303291 0.1884370 0.2193678 0.4307520 0.43072565 0.1997320 0.1865234 0.9261510 0.8888831 0.8849886 0.8982603 0.890369 5 0.901308 0.898402 -6.1527e-05 12 0.863844 0.869989 -0.00614538 0.4656777 0.55090142 insignificant 1.0000 1.000000 insignificant 0.160559 8.4007e-01 insignificant 1 1.000000 insignificant -0.0103227 0.6809673 insignificant 1 insignificant 0.901308 0.2656944 0.64009005 12 0.863844 0.297798 0.56604552 4.0673e-102 1.0000e+00 hypermethylated 2.0337e-99 1.0000e+00 hypermethylated 5.8831e-25 1.0000e+00 hypermethylated 2.9416e-22 1.0000000 hypermethylated 0.54042671 1.6303e-06 hypermethylated 9.5901e-05 hypermethylated 0.901308 0.895375 0.0134044 11 0.863844 0.850151 0.01369310 1.3528e-02 5.3504e-01 weaklyHypermeth 3.8653e-01 1.0000e+00 insignificant 1.9104e-02 8.3358e-01 weaklyHypermeth 7.6416e-01 1.0000000 insignificant 0.02995071 0.33369637 insignificant 1.000000 insignificant 0.898402 0.2656944 0.64128420 12 0.869989 0.297798 0.5721909 1.2901e-79 1.0000e+00 hypermethylated 6.4505e-77 1.0000000 hypermethylated 1.6068e-21 1.00000000 hypermethylated 8.0338e-19 1.00000 hypermethylated 0.55074940 3.2592e-06 hypermethylated 1.9172e-04 hypermethylated 0.898402 0.895375 0.0139625 11 0.869989 0.850151 0.0198385 8.7289e-03 1.7513e-01 weaklyHypermeth 2.7278e-01 1.0000e+00 insignificant 4.7042e-02 4.9372e-01 weaklyHypermeth 1.00000000 1.0000000 insignificant 0.04027340 1.8338e-01 insignificant 1.000000 insignificant 0.2656944 0.8953749 -0.6209069 11 0.297798 0.850151 -0.5523524 1.0000e+00 7.3419e-42 hypomethylated 1.0000e+00 3.6710e-39 hypomethylated 1.0000e+00 8.0879e-14 hypomethylated 1.0000e+00 4.0440e-11 hypomethylated -0.51047600 2.7000e-06 hypomethylated 5.3999e-04 hypomethylated chr2 239907933 239908933 10732 ENSG00000213828 0.8410670 187 5 0.721156 104 5 0.8689975 57 5 0.8485965 99 5 0.813636 32 2 0.877011 160 5 0.828054 78 5 0.565158 53 2 0.758636 65 5 0.821532 63 5 0.867874 147 5 0.8015616 53 5 0.911474 67 4 1.000000 7 1 0.8943277 102 5 0.769048 75 5 0.824090 45 5 0.8857660 102 5 0.8804939 122 5 0.837739 183 5 0.870211 47 5 0.8551587 53 5 0.8858333 95 5 0.8133333 26 2 0.8625397 42 5 0.7850877 90 3 0.877246 51 2 0.934511 50 2 0.7882353 66 2 0.820531 113 5 0.8507143 84 5 0.8606909 211 5 0.8511905 61 4 0.6493608 76 5 0.7933894 94 5 0.8951515 45 5 0.730769 43 2 0.5947976 109 5 0.882978 205 5 0.895765 157 5 0.777120 145 5 0.900035 194 5 0.840741 176 5 0.9121847 0.8286431 0.914591 0.8524584 0.8824761 0.920748 0.850162 0.7854846 0.8045455 0.8484867 0.9019836 0.8533930 0.9379086 NA 0.9390411 0.818766 0.8940366 0.896439 0.9139574 0.886726 0.9082622 0.8865523 0.920504 0.8967105 0.8647243 0.8739612 0.858982 0.903101 0.912152 0.8903153 0.9189380 0.8885449 0.8784070 0.7549713 0.7759564 0.93411085 0.8791568 0.7000293 0.9125044 0.9285786 0.8586783 0.9062558 0.894371 2 0.864520 0.889009 -1.3544e-02 5 0.838226 0.855967 -0.01774091 0.8071548 0.11498971 insignificant 1.0000 1.000000 insignificant 0.838551 3.2273e-01 insignificant 1 1.000000 insignificant -0.0195301 0.4025777 lowCoverage 1 lowCoverage 0.864520 0.7803738 0.09248644 5 0.838226 0.733683 0.10454290 1.7120e-05 9.9997e-01 weaklyHypermeth 2.3778e-04 1.0000e+00 weaklyHypermeth 7.0389e-02 9.7010e-01 insignificant 6.4126e-01 1.0000000 insignificant 0.07836777 1.7216e-01 lowCoverage 1.0000e+00 lowCoverage 0.864520 0.872292 -0.0236802 5 0.838226 0.864521 -0.02629500 9.3808e-01 1.1687e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.5083e-01 1.7710e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.02851680 0.36532288 lowCoverage 1.000000 lowCoverage 0.889009 0.7803738 0.10651395 5 0.855967 0.733683 0.1222838 3.3321e-06 1.0000e+00 weaklyHypermeth 5.1263e-05 1.0000000 weaklyHypermeth 2.9653e-02 0.99692549 weaklyHypermeth 2.9359e-01 1.00000 insignificant 0.09789790 9.5832e-02 lowCoverage 9.0407e-01 lowCoverage 0.889009 0.872292 -0.0078775 5 0.855967 0.864521 -0.0085541 5.8469e-01 4.5560e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 6.2982e-01 7.3815e-02 insignificant 1.00000000 1.0000000 insignificant -0.00898667 7.4224e-01 lowCoverage 1.000000 lowCoverage 0.7803738 0.8722919 -0.1138243 5 0.733683 0.864521 -0.1308379 9.9991e-01 1.7653e-04 weaklyHypometh 1.0000e+00 3.0570e-03 weaklyHypometh 9.8557e-01 1.6014e-02 weaklyHypometh 1.0000e+00 2.3208e-01 insignificant -0.10688457 8.1922e-02 lowCoverage 8.0316e-01 lowCoverage chr2 240051633 240052633 10737 ENSG00000222020 0.9149104 328 5 0.811548 102 5 0.7808212 96 5 0.9263534 249 5 0.902222 39 5 0.906774 276 5 0.912941 64 5 0.895441 84 5 0.853333 70 5 0.983333 50 5 0.889392 137 5 0.7746753 42 5 0.915328 120 5 NA 0 0 0.9466667 93 5 0.888462 47 3 0.880000 27 5 0.7626523 276 5 0.8096078 68 5 0.904468 209 5 0.969231 71 5 0.8544995 80 5 0.9355782 125 5 1.0000000 53 5 0.9327778 43 5 0.9390646 118 5 0.871313 63 5 0.925628 66 5 0.9186688 65 5 0.957064 127 5 0.9411905 106 5 0.9196930 247 5 0.4657808 129 5 0.0955128 104 5 NA 0 0 0.0931276 100 5 0.680000 53 5 0.4217195 128 5 0.917682 209 5 0.915047 320 5 0.950952 270 5 0.948862 329 5 0.864710 321 5 0.9140164 0.8128428 0.781505 0.9279958 0.9025000 0.906159 0.908309 0.8944118 0.8541667 0.9812500 0.8891479 0.7701840 0.9161491 NA 0.9463889 0.890625 0.8700000 0.762740 0.8090993 0.904593 0.9653846 0.8538977 0.932898 1.0000000 0.9310590 0.9410161 0.871736 0.925135 0.920520 0.9570220 0.9409077 0.9195944 0.4643821 0.0933494 NA 0.09661641 0.6782639 0.4180684 0.9180744 0.9141889 0.9509821 0.9480738 0.864122 5 0.881363 0.930412 -5.1211e-02 5 0.880865 0.931676 -0.05081057 0.9999972 0.00018651 weaklyHypometh 1.0000 0.066821 weaklyHypometh 0.999986 1.2191e-03 weaklyHypometh 1 0.189149 insignificant -0.0536066 0.0059343 lowCoverage 1 lowCoverage 0.881363 0.3307393 0.54958021 5 0.880865 0.334797 0.54606820 4.2052e-32 1.0000e+00 hypermethylated 3.5044e-30 1.0000e+00 hypermethylated 9.4934e-11 1.0000e+00 hypermethylated 7.9112e-09 1.0000000 hypermethylated 0.52555765 9.4005e-03 lowCoverage 1.6787e-01 lowCoverage 0.881363 0.919945 -0.0373238 5 0.880865 0.917852 -0.03698679 9.8566e-01 3.8185e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.7646e-01 5.7625e-02 insignificant 1.0000e+00 1.0000000 insignificant -0.04266472 0.06635679 lowCoverage 1.000000 lowCoverage 0.930412 0.3307393 0.60015839 5 0.931676 0.334797 0.5968788 2.0493e-25 1.0000e+00 hypermethylated 1.5764e-23 1.0000000 hypermethylated 7.9750e-11 1.00000000 hypermethylated 7.9750e-09 1.00000 hypermethylated 0.57916428 6.7556e-03 lowCoverage 1.2991e-01 lowCoverage 0.930412 0.919945 0.0135062 5 0.931676 0.917852 0.0138238 2.6463e-01 8.6272e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.4716e-01 8.9235e-01 insignificant 1.00000000 1.0000000 insignificant 0.01094191 5.8489e-01 insignificant 1.000000 insignificant 0.3307393 0.9199448 -0.5857969 5 0.334797 0.917852 -0.5830550 1.0000e+00 9.2676e-12 hypomethylated 1.0000e+00 4.4131e-10 hypomethylated 1.0000e+00 9.1523e-08 hypomethylated 1.0000e+00 1.0986e-05 hypomethylated -0.56822237 7.0251e-03 lowCoverage 1.4947e-01 lowCoverage chr2 240516333 240517333 10740 ENSG00000220256 0.7911204 825 20 0.713488 321 16 0.7932898 454 18 0.7694226 538 18 0.744767 234 16 0.773510 634 20 0.713612 423 20 0.852721 383 14 0.817971 507 18 0.785879 420 18 0.761248 489 19 0.8750213 336 18 0.734207 452 18 0.799170 173 10 0.8573811 562 18 0.774849 220 16 0.761952 170 7 0.7751778 884 18 0.7544969 420 18 0.762889 716 20 0.740032 209 18 0.7008458 376 18 0.7016665 439 16 0.8780002 148 14 0.8188675 304 18 0.8554002 500 19 0.722621 288 14 0.848129 214 14 0.7617514 310 18 0.781259 613 20 0.8423817 489 20 0.8471693 684 18 0.5617480 530 18 0.5019244 495 20 0.4714429 394 12 0.5879980 312 18 0.619558 402 20 0.3582407 806 20 0.750006 892 20 0.802362 765 18 0.698750 827 20 0.722879 1270 18 0.800171 824 20 0.7581169 0.6537411 0.797320 0.7145164 0.7248103 0.753053 0.732664 0.8094807 0.8011535 0.7053129 0.7343678 0.8480583 0.6313134 0.7608509 0.8557925 0.756116 0.7620286 0.827345 0.7526742 0.697249 0.7965064 0.6781606 0.722456 0.8761443 0.8507574 0.8179424 0.729053 0.895356 0.682732 0.7361341 0.7977758 0.8300222 0.5578449 0.4986913 0.3994306 0.56878256 0.6793283 0.2452392 0.6783234 0.7518349 0.5850633 0.6733525 0.800753 12 0.767256 0.787183 -2.0713e-02 18 0.801731 0.784105 0.01762606 0.9743045 0.31427555 insignificant 1.0000 1.000000 insignificant 0.998418 2.1306e-01 insignificant 1 1.000000 insignificant -0.0109017 0.6112924 insignificant 1 insignificant 0.767206 0.4795779 0.29524711 18 0.793470 0.493875 0.29959456 9.2837e-50 1.0000e+00 hypermethylated 1.5473e-47 1.0000e+00 hypermethylated 3.3711e-19 1.0000e+00 hypermethylated 1.1237e-16 1.0000000 hypermethylated 0.26378990 7.4186e-04 hypermethylated 2.2590e-02 hypermethylated 0.767213 0.723460 0.0496938 18 0.789846 0.777811 0.01203439 6.3303e-03 9.4950e-01 weaklyHypermeth 2.1828e-01 1.0000e+00 insignificant 2.3064e-02 9.9832e-01 weaklyHypermeth 8.3513e-01 1.0000000 insignificant 0.02577488 0.30234806 insignificant 1.000000 insignificant 0.787183 0.4794148 0.31162160 18 0.784105 0.474120 0.3099847 2.4365e-32 1.0000e+00 hypermethylated 2.7072e-30 1.0000000 hypermethylated 9.6270e-14 1.00000000 hypermethylated 1.9254e-11 1.00000 hypermethylated 0.27469160 2.9493e-04 hypermethylated 1.0533e-02 hypermethylated 0.787341 0.723460 0.0709731 18 0.792544 0.777811 0.0147321 8.4167e-04 9.7628e-01 weaklyHypermeth 3.9423e-02 1.0000e+00 weaklyHypermeth 2.0163e-03 9.9990e-01 weaklyHypermeth 0.12602057 1.0000000 insignificant 0.03667658 2.1477e-01 insignificant 1.000000 insignificant 0.4798909 0.7234600 -0.2572430 18 0.523621 0.777811 -0.2541900 1.0000e+00 2.3133e-13 hypomethylated 1.0000e+00 1.3607e-11 hypomethylated 1.0000e+00 1.0342e-07 hypomethylated 1.0000e+00 1.0986e-05 hypomethylated -0.23801502 7.8940e-04 hypomethylated 3.4322e-02 hypomethylated chr2 241037233 241038233 10747 GPC1 ENSG00000063660 0.8857961 280 6 0.627557 383 5 0.7507051 129 5 0.9356602 281 5 0.637566 38 4 0.888131 342 6 0.710060 63 4 0.684141 175 5 0.634970 142 5 0.918323 98 6 0.800113 280 10 0.7628571 47 7 0.729321 238 8 0.916134 126 5 0.8318015 139 5 0.851852 24 2 0.666667 20 0 0.9126571 313 5 0.8399278 255 10 0.929719 186 7 0.838333 74 5 0.6354167 46 4 0.8933687 156 6 0.6692308 69 5 0.8800000 17 3 0.8110234 345 5 0.510155 60 5 0.694444 57 4 0.6878695 200 6 0.897596 332 5 0.8047003 325 5 0.9154655 291 5 0.8344020 300 8 0.9488095 67 6 1.0000000 121 3 0.5000000 7 0 0.570965 228 5 0.7476391 340 8 0.651684 170 4 0.895746 191 3 0.434107 154 3 0.773483 221 3 0.633074 230 5 0.8768662 0.8135340 0.592681 0.8985130 0.7501308 0.940222 0.711637 0.9013372 0.7391091 0.9405501 0.8796312 0.7058608 0.7044956 0.8940068 0.8093891 0.981685 0.5865599 0.825143 0.8234575 0.878109 0.9468864 0.7692308 0.909558 0.9582418 0.8115402 0.8952924 0.796206 0.917582 0.883605 0.8800719 0.7936621 0.8832516 0.8484442 0.9752747 1.0000000 0.91793209 0.7960922 0.9181925 0.7726637 0.7983907 0.8187011 0.8949795 0.885036 3 0.833661 0.861055 -2.6126e-02 5 0.814539 0.782502 0.03203752 0.4771217 0.35671633 insignificant 1.0000 1.000000 insignificant 0.621409 4.2983e-01 insignificant 1 1.000000 insignificant 0.0258977 0.5654600 lowCoverage 1 lowCoverage 0.833661 0.8692380 -0.03577637 5 0.814539 0.789959 0.02457999 3.8787e-01 3.3477e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.7308e-01 1.3668e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.02872877 7.4879e-01 insignificant 1.0000e+00 insignificant 0.834000 0.834369 0.0020162 3 0.814648 0.804457 0.01019076 1.4179e-01 2.6009e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 2.0976e-01 2.2294e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 0.11807919 0.20582418 lowCoverage 1.000000 lowCoverage 0.861055 0.8692380 -0.00685471 5 0.782502 0.789959 -0.0074575 3.5115e-01 5.1887e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.4288e-01 0.41639338 insignificant 1.0000e+00 1.00000 insignificant 0.00283103 9.7577e-01 lowCoverage 1.0000e+00 lowCoverage 0.862140 0.834369 0.0334865 3 0.782145 0.804457 -0.0223126 1.3955e-01 2.4826e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 1.6589e-01 5.1516e-01 lowCoverage 1.00000000 1.0000000 lowCoverage 0.09218145 3.2260e-01 lowCoverage 1.000000 lowCoverage 0.8715244 0.8343685 0.0581721 3 0.794399 0.804457 -0.0100582 9.8429e-02 1.9714e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.1102e-02 8.6840e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.08935043 4.4777e-01 lowCoverage 1.0000e+00 lowCoverage chr2 241909733 241910733 10757 SEPT2 ENSG00000168385 0.7023077 252 6 0.714577 144 6 0.7161524 116 6 0.7648440 124 5 0.782786 99 6 0.815054 193 6 0.808995 132 6 0.768293 118 6 0.738356 80 6 0.816355 87 6 0.825971 195 6 0.7647782 90 5 0.768787 156 6 0.800855 54 5 0.7941392 132 6 0.873152 79 5 0.771863 93 5 0.7109273 317 6 0.7475920 80 6 0.798924 220 6 0.861654 43 2 0.7450142 56 5 0.7537092 148 6 0.7772602 72 5 0.7265432 73 4 0.7561063 117 6 0.741132 67 4 0.812757 72 6 0.7796829 140 6 0.748869 106 6 0.7373881 101 6 0.8345025 242 6 0.6843864 117 6 0.5735714 150 6 0.5716674 161 6 0.6985294 73 5 0.623877 147 6 0.7153614 132 6 0.850190 294 6 0.773167 228 6 0.808508 203 6 0.812102 244 5 0.823757 159 6 0.7018740 0.6664380 0.739594 0.7612933 0.7813117 0.821640 0.800049 0.7565796 0.6657773 0.8305534 0.8173861 0.7063172 0.7736979 0.7986987 0.8222311 0.853595 0.7745329 0.722471 0.7327663 0.765782 0.7898936 0.7509363 0.740160 0.7837796 0.7019420 0.7525186 0.693406 0.806923 0.762767 0.7233275 0.7364054 0.8013615 0.6729818 0.5819458 0.6052293 0.64535140 0.6198200 0.7050379 0.8276532 0.7597826 0.7906605 0.7982374 0.807725 4 0.763491 0.763137 6.4599e-03 6 0.774093 0.776302 -0.00220831 0.0986054 0.35759267 insignificant 1.0000 1.000000 insignificant 0.052191 5.1193e-01 insignificant 1 1.000000 insignificant 0.0013506 0.9323176 insignificant 1 insignificant 0.763491 0.6243590 0.13487170 6 0.774093 0.630231 0.14386186 1.2348e-08 9.9073e-01 weaklyHypermeth 2.0929e-07 1.0000e+00 weaklyHypermeth 4.9063e-06 9.9767e-01 weaklyHypermeth 1.5827e-04 1.0000000 weaklyHypermeth 0.12967007 2.7939e-03 weaklyHypermeth 6.9847e-02 weaklyHypermeth 0.763491 0.789007 -0.0369017 6 0.774093 0.813973 -0.03987932 9.9841e-01 4.3644e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9876e-01 2.7052e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant -0.03930931 0.03350651 weaklyHypometh 0.933194 insignificant 0.763137 0.6243590 0.13646945 6 0.776302 0.630231 0.1460702 1.6387e-06 9.9989e-01 weaklyHypermeth 2.6011e-05 1.0000000 weaklyHypermeth 9.7836e-06 0.98805019 weaklyHypermeth 3.2612e-04 1.00000 weaklyHypermeth 0.12831949 2.6369e-03 weaklyHypermeth 6.4314e-02 weaklyHypermeth 0.763137 0.789007 -0.0415789 6 0.776302 0.813973 -0.0376710 9.8001e-01 3.9852e-03 weaklyHypometh 1.0000e+00 5.6932e-01 insignificant 9.9089e-01 1.1298e-03 weaklyHypometh 1.00000000 0.2259651 insignificant -0.04065989 3.8966e-02 weaklyHypometh 1.000000 insignificant 0.6243590 0.7890071 -0.1665200 6 0.630231 0.813973 -0.1837412 9.9980e-01 3.2705e-06 weaklyHypometh 1.0000e+00 7.9769e-05 weaklyHypometh 9.9990e-01 9.1042e-05 weaklyHypometh 1.0000e+00 3.6417e-03 weaklyHypometh -0.16897938 5.9522e-04 weaklyHypometh 2.9802e-02 weaklyHypometh chr2 242350033 242351033 10769 D2HGDH ENSG00000180902 0.6659791 280 10 0.629441 218 11 0.5142400 174 10 0.5620568 245 10 0.642980 100 8 0.693221 380 9 0.516595 100 7 0.639947 146 9 0.707832 112 8 0.709989 144 10 0.634262 345 11 0.5954966 100 7 0.672330 181 10 0.744048 23 3 0.6915880 120 10 0.452991 61 5 0.651267 113 7 0.7314526 143 10 0.7530448 199 10 0.760283 259 9 0.754423 86 11 0.7236395 42 5 0.6111763 186 10 0.6982438 123 10 0.6384921 64 9 0.6362169 261 11 0.722999 119 8 0.610281 61 6 0.6928344 133 9 0.558244 233 11 0.6529575 257 12 0.7077256 370 11 0.6538871 192 11 0.4972527 165 9 0.6106542 145 7 0.5845187 69 5 0.684865 116 9 0.6939930 282 12 0.730575 249 10 0.711470 345 11 0.687449 330 10 0.743447 195 6 0.750840 283 11 0.5768322 0.5509251 0.567143 0.6128212 0.5874922 0.670609 0.554252 0.6168063 0.5763561 0.6539290 0.6741893 0.5589341 0.6767713 0.6016626 0.6717172 0.510572 0.5549609 0.562413 0.6116156 0.608358 0.6377827 0.6820221 0.643024 0.6383438 0.6320315 0.6074348 0.658443 0.654449 0.621243 0.5941077 0.6240986 0.6258855 0.5702094 0.5440014 0.5292074 0.60957454 0.5565981 0.5416127 0.7045990 0.6297349 0.6009561 0.6572407 0.698802 5 0.658721 0.667700 -1.7177e-02 11 0.709877 0.637289 0.07258725 0.7200131 0.19355136 insignificant 1.0000 1.000000 insignificant 0.930023 1.5209e-01 insignificant 1 1.000000 insignificant -0.0188173 0.4634223 insignificant 1 insignificant 0.658622 0.6146694 0.04287694 11 0.690535 0.558186 0.13234848 2.8397e-03 9.4312e-01 weaklyHypermeth 2.7569e-02 1.0000e+00 weaklyHypermeth 1.6720e-01 6.6368e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.02759033 4.5729e-01 insignificant 1.0000e+00 insignificant 0.658487 0.727338 -0.0361313 9 0.712156 0.736502 -0.02434659 9.0370e-01 2.6976e-02 weaklyHypometh 1.0000e+00 9.0179e-01 insignificant 8.9320e-01 1.2051e-02 weaklyHypometh 1.0000e+00 0.7144549 insignificant -0.07630385 0.00233186 weaklyHypometh 0.237810 insignificant 0.667528 0.6146694 0.06501455 11 0.613109 0.558186 0.0549221 4.6855e-04 9.1685e-01 weaklyHypermeth 5.3856e-03 1.0000000 weaklyHypermeth 5.4857e-02 0.92285008 insignificant 4.7291e-01 1.00000 insignificant 0.04640761 2.1461e-01 insignificant 1.0000e+00 insignificant 0.670484 0.725772 -0.0158448 9 0.708052 0.714544 -0.0064918 5.7948e-01 2.2998e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.2903e-01 2.5141e-01 insignificant 1.00000000 1.0000000 insignificant -0.05748657 1.3003e-02 weaklyHypometh 0.812693 insignificant 0.6172199 0.7259684 -0.0739016 9 0.682523 0.736502 -0.0539794 2.2893e-01 6.2514e-04 weaklyHypometh 1.0000e+00 8.6825e-03 weaklyHypometh 7.5634e-01 7.1797e-02 insignificant 1.0000e+00 7.0389e-01 insignificant -0.10389418 1.6576e-02 weaklyHypometh 2.6394e-01 insignificant chr2 242362333 242363333 10770 D2HGDH ENSG00000180902 0.8374603 659 16 0.813351 488 16 0.8292249 434 16 0.8114009 574 16 0.856446 282 14 0.828390 709 16 0.722863 341 16 0.737531 409 16 0.797005 438 16 0.845859 576 16 0.738687 583 16 0.7229315 244 14 0.893735 565 16 0.905545 292 10 0.8502812 487 14 0.724200 147 9 0.738706 69 5 0.8130852 679 16 0.7144216 671 16 0.753704 483 16 0.724344 214 14 0.6929058 208 14 0.7664090 391 16 0.7603580 245 13 0.8323270 164 11 0.8115967 557 16 0.703836 311 14 0.740278 188 11 0.7596311 569 16 0.891120 633 16 0.8796398 455 16 0.8313667 638 16 0.6471577 417 16 0.4936837 318 16 0.7657464 428 16 0.5809982 138 9 0.476287 356 18 0.6570763 477 17 0.761902 459 16 0.868951 599 16 0.880059 422 16 0.878507 497 16 0.795580 470 17 0.8633852 0.7930347 0.862129 0.8916723 0.9159903 0.898898 0.848859 0.9124054 0.8915684 0.9337719 0.8961054 0.9273688 0.9136109 0.9015190 0.8952268 0.796240 0.9178192 0.848592 0.8926887 0.894843 0.9005275 0.8149528 0.896736 0.9010949 0.8860688 0.9271023 0.910117 0.881401 0.856315 0.9268753 0.9001957 0.8783473 0.7396305 0.6395039 0.7396339 0.70868330 0.6124265 0.8377014 0.8785983 0.9099830 0.8757992 0.8865596 0.871392 13 0.878124 0.883228 -1.0693e-02 16 0.713478 0.724348 -0.01087045 0.6785873 0.09695673 insignificant 1.0000 1.000000 insignificant 0.768831 5.5109e-02 insignificant 1 1.000000 insignificant 0.0139237 0.5566126 insignificant 1 insignificant 0.878512 0.6504217 0.21318656 16 0.749414 0.502396 0.24701763 2.0622e-31 9.9805e-01 hypermethylated 1.5863e-29 1.0000e+00 hypermethylated 1.0689e-07 9.8742e-01 hypermethylated 4.8585e-06 1.0000000 hypermethylated 0.19324986 6.1914e-03 weaklyHypermeth 1.1682e-01 insignificant 0.880097 0.871984 0.0014192 16 0.805396 0.756333 0.04906264 4.4111e-01 3.2419e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.2729e-01 7.0796e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.04025853 0.19474341 insignificant 1.000000 insignificant 0.883370 0.6504217 0.22680763 16 0.744743 0.502396 0.2423474 1.8391e-21 9.9991e-01 hypermethylated 9.1956e-20 1.0000000 hypermethylated 1.6513e-06 0.99605411 hypermethylated 5.8975e-05 1.00000 hypermethylated 0.17932621 7.9710e-03 weaklyHypermeth 1.5040e-01 insignificant 0.887324 0.873407 0.0150033 16 0.804932 0.773633 0.0312992 2.7108e-02 5.1798e-01 weaklyHypermeth 5.5323e-01 1.0000e+00 insignificant 2.0110e-02 7.4653e-01 weaklyHypermeth 0.71819968 1.0000000 insignificant -0.05418218 1.1369e-01 insignificant 1.000000 insignificant 0.6542277 0.8737624 -0.2143181 16 0.555406 0.773415 -0.2180088 9.9995e-01 1.3906e-08 hypomethylated 1.0000e+00 5.1503e-07 hypomethylated 9.9660e-01 4.1976e-04 hypomethylated 1.0000e+00 1.2710e-02 hypomethylated -0.23350839 2.0474e-03 weaklyHypometh 6.1642e-02 weaklyHypometh chr2 242403833 242404833 10775 NEU4 ENSG00000204099 0.8686577 840 20 0.847709 450 18 0.8294912 416 19 0.9293836 827 20 0.930397 402 19 0.936729 917 20 0.885654 566 19 0.926402 417 19 0.798673 393 19 0.816979 628 19 0.918633 719 19 0.8779430 303 17 0.898400 512 19 0.835839 371 16 0.8126833 573 19 0.809217 366 16 0.871429 23 3 0.9079161 1469 19 0.8937577 1212 20 0.901170 833 20 0.829580 228 18 0.8723803 243 13 0.8211053 469 20 0.8942154 175 15 0.8614606 218 10 0.9279866 699 18 0.767377 415 17 0.746457 261 17 0.8922626 849 19 0.884823 570 18 0.8840755 558 18 0.9300071 1017 20 0.7451199 459 17 0.6464027 673 19 0.6903865 681 19 0.8013889 103 10 0.695217 415 14 0.5294020 988 20 0.850166 828 21 0.887836 762 20 0.858959 635 20 0.840545 1246 19 0.823351 600 20 0.9274466 0.8393540 0.863999 0.9219640 0.9429457 0.931431 0.927094 0.9265557 0.8828660 0.9397356 0.9185439 0.8956593 0.8947960 0.9063256 0.9513745 0.890499 0.8571267 0.882834 0.9008560 0.885862 0.9557616 0.8546226 0.947615 0.9212484 0.9280179 0.9298578 0.894652 0.889586 0.877303 0.9219953 0.9120584 0.9305160 0.7258364 0.6788642 0.6401693 0.75443047 0.8009582 0.5578518 0.8927801 0.8919393 0.9315077 0.8626962 0.892047 15 0.909604 0.916667 -4.8398e-03 19 0.779358 0.734661 0.04469667 0.8835974 0.01498851 weaklyHypometh 1.0000 0.651674 insignificant 0.997821 7.8228e-03 weaklyHypometh 1 0.521522 insignificant 0.0155424 0.4367550 insignificant 1 insignificant 0.909812 0.6505587 0.25916059 19 0.822336 0.538634 0.28370139 6.1161e-50 1.0000e+00 hypermethylated 1.2232e-47 1.0000e+00 hypermethylated 1.1329e-11 1.0000e+00 hypermethylated 1.2588e-09 1.0000000 hypermethylated 0.19020046 3.2189e-03 weaklyHypermeth 7.8510e-02 weaklyHypermeth 0.909886 0.893831 0.0138827 19 0.855229 0.861974 -0.00674491 4.8771e-03 6.8179e-01 weaklyHypermeth 2.0321e-01 1.0000e+00 insignificant 8.6556e-02 5.9826e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.02268177 0.14890117 insignificant 1.000000 insignificant 0.917618 0.6510997 0.26748899 19 0.793089 0.562660 0.2304287 1.3524e-32 1.0000e+00 hypermethylated 1.6905e-30 1.0000000 hypermethylated 5.1191e-11 1.00000000 hypermethylated 5.6879e-09 1.00000 hypermethylated 0.17465810 3.9082e-03 weaklyHypermeth 8.6848e-02 weaklyHypermeth 0.917765 0.893638 0.0232468 19 0.816290 0.835161 -0.0188712 4.5393e-03 8.7867e-01 weaklyHypermeth 1.6812e-01 1.0000e+00 insignificant 8.3472e-03 9.7652e-01 weaklyHypermeth 0.37941844 1.0000000 insignificant 0.00713942 7.2432e-01 insignificant 1.000000 insignificant 0.6516888 0.8936118 -0.2415064 20 0.605942 0.828821 -0.2228792 1.0000e+00 1.7681e-13 hypomethylated 1.0000e+00 1.1051e-11 hypomethylated 9.9999e-01 3.2596e-06 hypomethylated 1.0000e+00 2.1731e-04 hypomethylated -0.16751869 5.7915e-03 weaklyHypometh 1.3789e-01 insignificant chr3 4490950 4491950 10841 SUMF1 ENSG00000144455 0.7811432 251 7 0.748732 87 7 0.7289304 96 7 0.8635531 90 7 0.668651 50 7 0.839753 193 7 0.717605 101 7 0.782586 70 5 0.799660 82 5 0.813000 77 7 0.758165 165 7 0.7863379 78 7 0.770212 110 7 NA 0 0 0.8549499 87 7 0.871429 76 7 0.650000 62 4 0.8122130 160 7 0.8365363 112 7 0.802832 152 7 0.928571 11 0 0.7793651 35 3 0.8094064 137 7 0.8112245 36 3 0.9438776 37 5 0.7679080 99 5 0.952381 22 3 0.767857 26 3 0.7397759 73 7 0.820247 118 7 0.7774327 83 3 0.8958536 292 7 0.7142857 40 4 0.5996599 107 7 0.7727273 92 7 0.8658730 68 7 0.741327 31 3 0.7107578 131 7 0.917273 217 7 0.879831 261 7 0.901622 125 7 0.843833 243 7 0.847047 188 7 0.8154536 0.7649041 0.733361 0.8495116 0.6416446 0.849073 0.751427 0.7960240 0.8215231 0.8335529 0.7789370 0.7217845 0.7657420 NA 0.8524784 0.813889 0.6734127 0.779404 0.8465766 0.782968 0.9603175 0.8280423 0.811131 0.6823980 0.9271542 0.8404389 0.917989 0.851190 0.780968 0.8652801 0.8125144 0.8973399 0.7324735 0.6179327 0.7039442 0.80934744 0.7244331 0.6716278 0.8984981 0.8754271 0.9028432 0.7790571 0.805565 3 0.794664 0.850361 -5.5764e-02 7 0.791487 0.843080 -0.05159299 0.9992555 0.00020046 weaklyHypometh 1.0000 0.066821 weaklyHypometh 0.999659 7.7098e-05 weaklyHypometh 1 0.077098 weaklyHypometh -0.0493362 0.0738053 lowCoverage 1 lowCoverage 0.794664 0.7014925 0.09462159 7 0.791487 0.713583 0.07790359 5.9877e-07 9.9036e-01 weaklyHypermeth 9.2118e-06 1.0000e+00 weaklyHypermeth 1.9165e-02 6.3859e-01 weaklyHypermeth 2.0924e-01 1.0000000 insignificant 0.04938385 2.3968e-01 insignificant 1.0000e+00 insignificant 0.794664 0.882979 -0.0786143 7 0.791487 0.875267 -0.08378014 9.9992e-01 6.6155e-06 weaklyHypometh 1.0000e+00 2.2052e-03 weaklyHypometh 1.0000e+00 5.9344e-06 weaklyHypometh 1.0000e+00 0.0029672 weaklyHypometh -0.09443247 0.00048398 weaklyHypometh 0.093924 weaklyHypometh 0.850361 0.7014925 0.15052946 7 0.843080 0.713583 0.1294966 2.3063e-08 9.9903e-01 weaklyHypermeth 4.1933e-07 1.0000000 weaklyHypermeth 1.9196e-04 0.97272830 weaklyHypermeth 4.2658e-03 1.00000 weaklyHypermeth 0.09872001 4.2634e-02 lowCoverage 5.6846e-01 lowCoverage 0.850361 0.882979 -0.0126281 7 0.843080 0.875267 -0.0321872 7.8422e-01 6.7882e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 5.3794e-01 8.0705e-01 insignificant 1.00000000 1.0000000 insignificant -0.04509631 1.0813e-01 lowCoverage 1.000000 lowCoverage 0.7014925 0.8829787 -0.1626294 7 0.713583 0.875267 -0.1616837 1.0000e+00 2.7947e-06 weaklyHypometh 1.0000e+00 7.0246e-05 weaklyHypometh 9.9969e-01 2.2848e-03 weaklyHypometh 1.0000e+00 4.8850e-02 weaklyHypometh -0.14381632 8.0818e-03 weaklyHypometh 1.5847e-01 insignificant chr3 4579950 4580950 10857 ITPR1 ENSG00000150995 0.8633794 228 7 0.557967 177 7 0.6738697 90 7 0.8548644 154 7 0.757383 67 5 0.833710 366 7 0.583295 61 5 0.818068 179 7 0.723465 97 7 0.805678 75 4 0.804948 235 7 0.8400488 48 7 0.846691 138 7 0.688312 33 2 0.7383938 99 7 0.971429 30 4 0.573469 25 3 0.7883559 171 7 0.6607352 192 7 0.720442 306 7 0.764991 62 4 0.6364198 80 7 0.7552891 149 7 0.5681436 73 7 0.7142857 62 7 0.8369743 263 7 0.724960 85 6 0.781250 36 3 0.6382440 156 7 0.726121 246 7 0.7969102 199 7 0.8436869 344 7 0.7271021 101 7 0.7006786 97 7 0.5568449 251 7 0.6500000 55 3 0.602563 111 4 0.7076625 197 7 0.849506 206 7 0.710402 195 7 0.804745 204 7 0.862030 181 7 0.876047 180 7 0.8395308 0.7230993 0.694481 0.8684669 0.7808201 0.835296 0.797765 0.8264746 0.7552349 0.8064961 0.8269751 0.8192124 0.8594958 0.8926177 0.7678537 0.980861 0.7398121 0.817587 0.7641120 0.857764 0.8069796 0.8283892 0.786523 0.8343818 0.7730690 0.8470199 0.811265 0.892344 0.752933 0.8367396 0.8024560 0.8025294 0.6443288 0.6749148 0.4915755 0.65909091 0.7366036 0.6857838 0.8527743 0.9047517 0.8228124 0.8595442 0.883321 4 0.821003 0.810826 8.6112e-03 7 0.680657 0.615215 0.06544253 0.0950595 0.89590563 insignificant 1.0000 1.000000 insignificant 0.379303 7.8778e-01 insignificant 1 1.000000 insignificant 0.0229522 0.5082245 insignificant 1 insignificant 0.821003 0.6022167 0.21623297 7 0.680657 0.552597 0.12806009 1.1843e-12 9.8669e-01 hypermethylated 2.8197e-11 1.0000e+00 hypermethylated 9.9958e-06 9.8913e-01 hypermethylated 3.0290e-04 1.0000000 hypermethylated 0.09774998 1.8431e-02 weaklyHypermeth 2.9727e-01 insignificant 0.822423 0.870600 -0.0462309 7 0.737767 0.667901 0.06986647 8.6455e-01 1.6678e-02 weaklyHypometh 1.0000e+00 6.9491e-01 insignificant 8.7627e-01 1.2860e-02 weaklyHypometh 1.0000e+00 0.7144549 insignificant -0.06532075 0.12145027 insignificant 1.000000 insignificant 0.810826 0.6022167 0.21291800 7 0.615215 0.552597 0.0626176 4.4068e-08 9.9850e-01 hypermethylated 7.7312e-07 1.0000000 hypermethylated 3.4900e-04 0.98964718 hypermethylated 7.2709e-03 1.00000 hypermethylated 0.07479776 6.2051e-02 insignificant 7.2953e-01 insignificant 0.813036 0.870600 -0.0526696 7 0.665054 0.667901 -0.0028475 9.9949e-01 2.1374e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9930e-01 1.1337e-01 insignificant 1.00000000 1.0000000 insignificant -0.08827297 4.6434e-02 weaklyHypometh 1.000000 insignificant 0.6029593 0.8706004 -0.2748224 7 0.613997 0.667901 -0.0539040 1.0000e+00 6.0534e-08 hypomethylated 1.0000e+00 2.0178e-06 hypomethylated 9.9998e-01 1.8370e-04 hypomethylated 1.0000e+00 6.5608e-03 hypomethylated -0.16307073 3.3028e-03 weaklyHypometh 8.9264e-02 weaklyHypometh chr3 4603350 4604350 10862 ITPR1 ENSG00000150995 0.7533969 258 6 0.810290 156 7 0.7694805 66 6 0.9010191 201 6 0.882395 55 6 0.783418 270 6 0.884354 45 2 0.863609 94 6 0.789499 82 6 0.776927 88 6 0.854699 153 6 0.6738095 20 1 0.900652 102 6 0.833036 65 5 0.9119048 60 6 0.333333 9 0 0.791667 15 1 0.9120988 182 6 0.9198413 82 7 0.916566 224 7 0.785714 30 3 0.9040936 73 4 0.7924928 106 6 0.8298611 75 5 0.9482571 69 5 0.7586552 131 6 0.778912 39 2 0.729025 40 4 0.9113580 79 6 0.943965 182 7 0.7896271 195 6 0.9703477 199 7 0.6849473 138 7 0.6296296 36 2 0.8162393 99 5 0.8333333 25 1 0.846263 122 5 0.8813147 177 6 0.874227 167 6 0.818897 194 6 0.849967 155 5 0.902778 88 5 0.906892 193 6 0.8628756 0.8367056 0.893195 0.8858776 0.8626368 0.884089 0.880952 0.8647292 0.8362996 0.8282490 0.9117918 0.7986111 0.8734149 0.7855655 0.9074074 0.375000 0.9357188 0.925697 0.9429977 0.900026 0.8593750 0.9032829 0.798491 0.9508102 0.9353214 0.8826688 0.879712 0.873595 0.894674 0.9228987 0.8809120 0.9631087 0.7918314 0.6649306 0.8600518 0.83333333 0.8688720 0.8897138 0.8763514 0.8392486 0.8354883 0.8993056 0.870396 0 0.870620 0.898194 -2.5666e-02 6 0.739231 0.826003 -0.08677238 0.9871510 0.12938171 insignificant 1.0000 1.000000 insignificant 0.969361 2.4824e-01 insignificant 1 1.000000 insignificant -0.0320926 0.4085812 insignificant 1 insignificant 0.870620 0.8308208 0.03815702 6 0.739231 0.793744 -0.05451356 1.3454e-01 8.5941e-01 insignificant 9.4749e-01 1.0000e+00 insignificant 4.3184e-01 8.1254e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.03114523 5.5018e-01 lowCoverage 1.0000e+00 lowCoverage 0.872523 0.877039 0.0029613 6 0.810801 0.884772 -0.07397085 3.9559e-01 1.9657e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.1328e-01 3.8452e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.05745243 0.10290104 insignificant 1.000000 insignificant 0.898194 0.8308208 0.06269234 6 0.826003 0.793744 0.0322588 3.9922e-02 9.9733e-01 weaklyHypermeth 3.0475e-01 1.0000000 insignificant 4.1420e-01 0.99254379 insignificant 1.0000e+00 1.00000 insignificant 0.06323781 2.1906e-01 lowCoverage 1.0000e+00 lowCoverage 0.899588 0.877039 0.0225815 6 0.887587 0.884772 0.0028147 3.7275e-01 5.6121e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.4009e-01 8.2748e-01 insignificant 1.00000000 1.0000000 insignificant -0.02535986 4.0385e-01 insignificant 1.000000 insignificant 0.8319328 0.8770389 -0.0429464 6 0.830462 0.884772 -0.0543098 9.8074e-01 9.6576e-02 insignificant 1.0000e+00 7.3722e-01 insignificant 9.4832e-01 4.2588e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.08859767 8.7970e-02 lowCoverage 8.5407e-01 lowCoverage chr3 4649350 4650350 10866 ITPR1 ENSG00000150995 0.7947967 488 8 0.679745 331 8 0.5083504 251 8 0.7351407 264 8 0.715988 109 8 0.841275 507 8 0.642680 207 8 0.819580 189 8 0.639511 251 8 0.744707 119 8 0.806832 286 8 0.6389126 137 7 0.673794 217 8 0.797980 41 3 0.7496451 245 8 0.741004 89 8 0.659226 143 4 0.6907397 224 8 0.6596994 304 8 0.800748 513 8 0.727757 112 7 0.7372651 154 8 0.7787233 237 8 0.8546412 108 8 0.7446429 79 8 0.6825521 404 8 0.757921 115 8 0.790882 113 8 0.7157581 188 8 0.855245 352 8 0.6266245 443 8 0.7241517 615 8 0.5254452 277 8 0.5111950 129 8 0.7337916 330 8 0.7776087 68 7 0.691871 205 8 0.5979512 513 8 0.788350 434 8 0.796186 435 8 0.713972 401 8 0.686362 554 8 0.816627 355 8 0.7898923 0.6797312 0.533855 0.7632591 0.7091365 0.866506 0.655472 0.8301972 0.6568024 0.7911323 0.7867369 0.6717553 0.7079736 0.7227038 0.7379850 0.733544 0.6800314 0.803675 0.6778100 0.786408 0.7430088 0.7724605 0.797419 0.8631300 0.7973383 0.7004841 0.765580 0.811921 0.763120 0.8767702 0.6572272 0.7443479 0.5169255 0.4683674 0.7049811 0.77189346 0.7042387 0.6049587 0.8124968 0.8002688 0.7337313 0.7117934 0.816280 8 0.717599 0.733562 -9.9167e-03 8 0.727815 0.749285 -0.02147002 0.8271254 0.27442587 insignificant 1.0000 1.000000 insignificant 0.819936 8.2748e-02 insignificant 1 1.000000 insignificant -0.0326626 0.2249739 insignificant 1 insignificant 0.717400 0.6097240 0.11591198 8 0.711649 0.620432 0.09121646 1.0526e-07 6.7631e-01 weaklyHypermeth 1.6708e-06 1.0000e+00 weaklyHypermeth 3.1470e-03 8.0011e-01 weaklyHypermeth 5.1590e-02 1.0000000 weaklyHypermeth 0.07737396 1.6008e-01 insignificant 1.0000e+00 insignificant 0.717599 0.737953 -0.0437986 8 0.727815 0.775422 -0.04760684 9.9150e-01 6.1392e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9681e-01 4.2988e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant -0.04328183 0.20095873 insignificant 1.000000 insignificant 0.733379 0.6097240 0.11843727 8 0.717945 0.620432 0.0975131 1.5989e-05 9.0946e-01 weaklyHypermeth 2.2520e-04 1.0000000 weaklyHypermeth 1.9443e-03 0.93279599 weaklyHypermeth 3.1874e-02 1.00000 weaklyHypermeth 0.11003660 6.1533e-02 insignificant 7.2953e-01 insignificant 0.733562 0.737953 -0.0306639 8 0.749285 0.775422 -0.0261368 9.8719e-01 3.8940e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.8448e-01 4.9947e-01 insignificant 1.00000000 1.0000000 insignificant -0.01061918 7.4477e-01 insignificant 1.000000 insignificant 0.6097240 0.7375919 -0.1538659 8 0.620432 0.747349 -0.1269170 9.2540e-01 1.0936e-04 weaklyHypometh 1.0000e+00 2.1030e-03 weaklyHypometh 9.8821e-01 9.7932e-03 weaklyHypometh 1.0000e+00 1.5067e-01 insignificant -0.12065578 5.0317e-02 insignificant 5.7179e-01 insignificant chr3 5033950 5034950 10906 BHLHE40 ENSG00000134107 0.6177266 203 9 0.554746 176 9 0.5548720 83 9 0.6685185 191 9 0.716804 104 8 0.654636 170 9 0.627587 123 9 0.606059 155 9 0.537037 56 9 0.680952 44 4 0.678386 179 9 0.6111111 26 0 0.632045 89 5 0.758853 74 5 0.6444444 34 3 0.571429 21 0 NA 0 0 0.6429812 199 9 0.6466049 99 9 0.626998 139 9 0.665741 49 6 0.7142857 12 1 0.7224442 133 9 0.6453676 104 9 0.6048950 185 9 0.7414566 151 9 0.758120 103 9 0.742857 35 5 0.6869706 121 9 0.710869 152 9 0.6197323 132 9 0.7664141 121 9 0.3429043 165 9 0.3190684 119 9 0.2758820 197 7 0.5185185 26 3 0.306605 169 9 0.5852887 141 9 0.562143 259 9 0.557656 238 9 0.509115 214 9 0.379464 133 7 0.524365 262 9 0.4771413 0.4257578 0.443527 0.5199313 0.6480787 0.516005 0.520809 0.5290111 0.4440353 0.4953363 0.5411458 0.5498282 0.5505005 0.6550583 0.5757732 0.489531 NA 0.506099 0.4971363 0.481392 0.5665808 0.5565923 0.579318 0.5413890 0.4821469 0.5608204 0.623751 0.634699 0.541843 0.5608446 0.4925804 0.5715063 0.3033369 0.2132269 0.1945205 0.37113402 0.2890444 0.4774018 0.4488292 0.4480728 0.4001789 0.3599810 0.413209 0 0.562644 0.671296 -4.5411e-02 9 0.670808 0.711290 -0.04048141 0.9993683 0.03246787 weaklyHypometh 1.0000 0.928650 insignificant 0.993470 4.6198e-02 weaklyHypometh 1 1.000000 insignificant -0.0650106 0.0035831 weaklyHypometh 1 insignificant 0.562442 0.3304774 0.26610501 9 0.634231 0.362168 0.27206300 1.4281e-16 9.9970e-01 hypermethylated 4.6067e-15 1.0000e+00 hypermethylated 5.2471e-06 1.0000e+00 hypermethylated 1.6397e-04 1.0000000 hypermethylated 0.24187438 4.8483e-03 weaklyHypermeth 1.0316e-01 insignificant 0.562442 0.353526 0.1089230 9 0.634231 0.534334 0.09989690 2.9027e-07 8.8193e-01 weaklyHypermeth 4.5865e-05 1.0000e+00 weaklyHypermeth 1.7633e-04 9.8465e-01 weaklyHypermeth 2.9388e-02 1.0000000 weaklyHypermeth 0.12670352 0.01509870 weaklyHypermeth 0.628928 insignificant 0.670788 0.3304774 0.34501949 9 0.679211 0.362168 0.3170423 2.8076e-17 9.9999e-01 hypermethylated 1.1698e-15 1.0000000 hypermethylated 1.1369e-06 0.99999969 hypermethylated 4.3726e-05 1.00000 hypermethylated 0.30688495 1.4172e-03 weaklyHypermeth 3.8710e-02 weaklyHypermeth 0.670788 0.353526 0.1573972 9 0.679211 0.534334 0.1448762 1.1288e-10 8.7795e-01 weaklyHypermeth 2.8219e-08 1.0000e+00 weaklyHypermeth 5.4991e-06 9.9230e-01 weaklyHypermeth 0.00137476 1.0000000 weaklyHypermeth 0.19171409 2.1585e-03 weaklyHypermeth 0.359744 insignificant 0.3304774 0.3535262 -0.2024472 9 0.362168 0.534334 -0.1721661 6.5254e-01 1.1357e-04 hypomethylated 1.0000e+00 2.1428e-03 hypomethylated 9.9749e-01 1.5793e-02 weaklyHypometh 1.0000e+00 2.3208e-01 insignificant -0.11517086 9.9182e-02 insignificant 9.2693e-01 insignificant chr3 6751150 6752150 10941 ENSG00000209727,ENSG00000222517 0.6631422 83 5 0.587970 85 5 0.5740741 30 3 0.9937500 73 2 0.599451 64 6 0.786386 75 5 0.721939 57 6 0.845157 91 5 0.500000 37 5 0.688889 19 1 0.638518 189 5 0.5000000 22 0 0.615385 54 5 0.520408 52 6 0.6428571 26 3 0.666667 3 0 0.000000 1 0 0.7611111 72 3 0.8533333 19 3 0.690476 47 5 0.638889 13 0 0.8666667 11 0 0.6373016 50 5 0.6748512 31 3 0.7277778 47 5 0.8097625 86 5 0.828363 61 5 0.666667 14 0 0.6953704 52 5 0.826746 71 5 0.8521429 83 5 0.7222222 39 5 0.5729391 93 6 0.5777778 36 5 0.5089744 80 5 0.6000000 7 0 0.491395 70 5 0.8579545 69 5 0.725649 84 5 0.703704 93 5 0.697895 91 5 0.720000 16 2 0.822083 145 5 0.7701314 0.6788811 0.653935 0.9934896 0.8450321 0.780193 0.797991 0.8296385 0.6622024 0.8222222 0.8929145 0.6232639 0.7375801 0.7107143 0.9166667 0.738284 NA 0.911111 0.8361111 0.806548 0.7291667 0.8472222 0.761210 0.8691716 0.8597222 0.8191660 0.812820 0.833333 0.784259 0.8080044 0.8331845 0.8472222 0.6988127 0.7192130 0.5454788 0.54166667 0.6862208 0.8271780 0.7074991 0.8217593 0.6799342 0.7208333 0.804601 0 0.805278 0.824373 -1.7930e-02 5 0.490915 0.628586 -0.13767076 0.9892754 0.03722019 weaklyHypometh 1.0000 0.946917 insignificant 0.997182 1.1103e-01 insignificant 1 1.000000 insignificant -0.1030877 0.0505901 lowCoverage 1 lowCoverage 0.808219 0.6591549 0.16423847 5 0.552279 0.545504 0.00677504 2.0029e-03 9.9817e-01 weaklyHypermeth 2.0231e-02 1.0000e+00 weaklyHypermeth 2.0033e-01 9.9834e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.04096878 5.6731e-01 lowCoverage 1.0000e+00 lowCoverage 0.810266 0.864802 0.0287620 5 0.680817 0.645201 0.03561638 2.7334e-01 8.3082e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.1515e-01 8.8234e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.09139063 0.07751938 lowCoverage 1.000000 lowCoverage 0.827338 0.6591549 0.16945625 5 0.707159 0.545504 0.1616546 3.8373e-04 9.9999e-01 weaklyHypermeth 4.4620e-03 1.0000000 weaklyHypermeth 4.8404e-02 0.99998428 weaklyHypermeth 4.3218e-01 1.00000 insignificant 0.14405649 4.5237e-02 lowCoverage 5.9522e-01 lowCoverage 0.829401 0.864802 0.0438154 5 0.720656 0.645201 0.0754559 2.4267e-02 9.4027e-01 weaklyHypermeth 5.2754e-01 1.0000e+00 insignificant 1.5280e-02 9.7291e-01 weaklyHypermeth 0.61118608 1.0000000 insignificant 0.01169708 7.3335e-01 lowCoverage 1.000000 lowCoverage 0.6600567 0.8648019 -0.1560138 5 0.560672 0.645201 -0.0845281 9.5136e-01 5.9930e-02 insignificant 1.0000e+00 4.9529e-01 insignificant 9.8780e-01 2.8535e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.13235941 6.0585e-02 lowCoverage 6.5145e-01 lowCoverage chr3 9371050 9372050 10980 ENSG00000214041 0.8402085 376 13 0.726494 270 13 0.6719457 205 11 0.8187503 192 13 0.781890 143 10 0.825818 413 13 0.649969 173 13 0.756418 166 12 0.648274 135 12 0.720696 159 10 0.844983 387 10 0.7364974 121 9 0.732682 198 12 0.805556 49 4 0.7648657 152 13 0.759048 66 7 0.760766 66 7 0.8353596 226 13 0.8501723 204 13 0.800045 436 13 0.792857 52 8 0.7506222 87 8 0.7750261 189 13 0.8317460 79 9 0.8247024 90 11 0.8101353 307 13 0.933625 126 12 0.809091 45 5 0.7598802 232 13 0.838174 314 13 0.7430386 321 13 0.8018505 543 13 0.7836792 212 13 0.7147084 200 13 0.7265028 164 11 0.7651515 36 0 0.712893 104 8 0.7068441 326 13 0.857724 322 13 0.796986 281 11 0.787566 249 13 0.829100 197 12 0.810010 282 13 0.8211102 0.7060882 0.687760 0.8159582 0.7885126 0.792577 0.682505 0.6874696 0.7079558 0.7120955 0.8320771 0.7562323 0.7161994 0.7595940 0.7613538 0.661006 0.6735813 0.781666 0.8292065 0.790047 0.7852564 0.7454641 0.701680 0.8317033 0.7796703 0.7366263 0.872642 0.809688 0.718592 0.7978575 0.7561693 0.7727742 0.7397989 0.6855422 0.7031083 0.75860140 0.7005042 0.6930832 0.8229198 0.7793265 0.7867452 0.8302269 0.823121 4 0.790186 0.819287 -1.7538e-02 13 0.784539 0.765166 0.01937311 0.8020037 0.02184467 weaklyHypometh 1.0000 0.829315 insignificant 0.980678 3.0257e-03 weaklyHypometh 1 0.336185 insignificant -0.0393738 0.0635677 insignificant 1 insignificant 0.790315 0.7677543 0.02408951 13 0.786099 0.745684 0.04041509 5.9720e-05 6.5552e-01 weaklyHypermeth 8.1809e-04 1.0000e+00 weaklyHypermeth 1.3739e-02 7.9451e-01 weaklyHypermeth 1.6553e-01 1.0000000 insignificant 0.03155881 1.1669e-01 insignificant 1.0000e+00 insignificant 0.790225 0.860255 -0.0433524 13 0.777568 0.828034 -0.05046516 9.7385e-01 6.6551e-03 weaklyHypometh 1.0000e+00 3.9148e-01 insignificant 9.8455e-01 1.2501e-02 weaklyHypometh 1.0000e+00 0.7144549 insignificant -0.04975516 0.01799760 weaklyHypometh 0.692215 insignificant 0.819596 0.7677543 0.03832256 13 0.803281 0.745684 0.0575969 5.9157e-04 9.9823e-01 weaklyHypermeth 6.6469e-03 1.0000000 weaklyHypermeth 2.1003e-03 0.99976328 weaklyHypermeth 3.3876e-02 1.00000 weaklyHypermeth 0.07093264 2.5702e-03 weaklyHypermeth 6.4255e-02 weaklyHypermeth 0.819555 0.860255 -0.0243113 13 0.803047 0.828034 -0.0249868 9.3493e-01 5.5562e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 8.3530e-01 4.2986e-01 insignificant 1.00000000 1.0000000 insignificant -0.01038133 5.9975e-01 insignificant 1.000000 insignificant 0.7677543 0.8601504 -0.0661453 13 0.745684 0.814805 -0.0691212 9.9476e-01 1.6067e-04 weaklyHypometh 1.0000e+00 2.9016e-03 weaklyHypometh 9.8511e-01 4.1862e-03 weaklyHypometh 1.0000e+00 7.3442e-02 weaklyHypometh -0.08131397 1.4728e-03 weaklyHypometh 4.9094e-02 weaklyHypometh chr3 9802250 9803250 10993 CAMK1 ENSG00000134072 0.7620249 118 6 0.637235 108 6 0.7795260 73 6 0.8506944 130 6 0.856481 34 3 0.790221 198 6 0.610256 44 3 0.780846 123 6 0.553030 61 6 0.679798 42 5 0.749362 176 6 0.9027778 20 0 0.820635 56 6 0.833333 42 6 0.7885587 71 6 0.458333 18 0 0.481481 23 0 0.7350485 127 6 0.8435185 74 6 0.860272 117 6 0.900463 39 5 0.8174603 40 6 0.7965812 57 6 0.7361111 40 6 0.8518519 54 6 0.8309475 116 6 0.828139 79 6 0.794872 32 2 0.6943750 93 6 0.719596 123 6 0.7055950 132 6 0.8476687 139 6 0.7164398 102 6 0.7591837 50 6 0.7727273 82 6 0.9444444 13 0 0.627976 59 6 0.7477101 94 6 0.731123 113 6 0.884827 114 6 0.835979 66 6 0.824405 71 6 0.780556 97 6 0.7656021 0.6354167 0.797417 0.8489057 0.8549383 0.816606 0.681517 0.7895790 0.5818182 0.6867424 0.7806224 0.8929398 0.8408069 0.8045635 0.8174615 0.475694 0.7939815 0.809792 0.8679012 0.841055 0.8862847 0.8449074 0.822924 0.7103588 0.8510802 0.8229492 0.826335 0.812204 0.768056 0.8400578 0.7285719 0.8578986 0.7316061 0.7361111 0.7670805 0.95138889 0.6728671 0.7800013 0.8112638 0.8754483 0.8310185 0.8174603 0.808284 2 0.771601 0.809322 -3.4431e-02 6 0.604313 0.704522 -0.10020913 0.9944701 0.13733990 insignificant 1.0000 1.000000 insignificant 0.998571 8.5707e-02 insignificant 1 1.000000 insignificant -0.0549665 0.1207180 lowCoverage 1 lowCoverage 0.772865 0.7500000 0.03054951 6 0.729354 0.771115 -0.04176030 2.5778e-01 8.4520e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.2297e-01 7.8101e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.02274184 6.6579e-01 lowCoverage 1.0000e+00 lowCoverage 0.772068 0.832972 -0.0603675 6 0.679852 0.749274 -0.06942254 9.8651e-01 3.8691e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.8725e-01 1.5726e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.07270603 0.08036836 lowCoverage 1.000000 lowCoverage 0.810638 0.7500000 0.06135969 6 0.762956 0.771115 -0.0081581 6.1010e-03 9.6752e-01 weaklyHypermeth 5.5464e-02 1.0000000 weaklyHypermeth 3.2213e-02 0.93785873 weaklyHypermeth 3.1026e-01 1.00000 insignificant 0.03222471 5.0891e-01 insignificant 1.0000e+00 insignificant 0.809979 0.832972 -0.0228353 6 0.730087 0.749274 -0.0191873 9.6423e-01 6.0224e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.9927e-01 8.5646e-01 insignificant 1.00000000 1.0000000 insignificant -0.01773948 5.9579e-01 insignificant 1.000000 insignificant 0.7500000 0.8326087 -0.0817876 6 0.771115 0.713456 0.0576583 9.9954e-01 3.9957e-03 weaklyHypometh 1.0000e+00 4.6270e-02 weaklyHypometh 9.7744e-01 8.4621e-02 insignificant 1.0000e+00 7.9085e-01 insignificant -0.04996420 3.4362e-01 insignificant 1.0000e+00 insignificant chr3 9873250 9874250 10994 RPUSD3 ENSG00000156990 0.7551030 322 9 0.593616 139 6 0.6992165 86 6 0.7930335 183 9 0.693563 127 9 0.726961 198 6 0.509030 126 9 0.767765 115 7 0.621524 105 9 0.668603 102 9 0.750515 219 9 0.6380471 62 4 0.754014 132 9 0.764851 68 8 0.8363223 144 9 0.783333 33 2 0.683634 167 6 0.6761381 218 9 0.7365520 113 6 0.820164 171 6 0.847057 45 4 0.8079772 65 6 0.7930372 200 9 0.6931818 69 6 0.8560185 54 3 0.7293947 152 6 0.659447 82 4 0.896296 34 2 0.6937500 120 8 0.687682 126 6 0.7467608 122 6 0.8339922 212 6 0.7451457 156 9 0.6572650 89 9 0.8517708 152 6 0.6312500 17 1 0.793685 116 9 0.7045895 154 6 0.898756 199 9 0.745456 302 9 0.815630 199 9 0.812149 230 9 0.818379 264 9 0.8601005 0.8034192 0.741917 0.8222385 0.6896880 0.889095 0.741468 0.7635502 0.7362688 0.8136571 0.8275530 0.7448111 0.7974855 0.7745434 0.9260639 0.794521 0.8604831 0.822582 0.8220265 0.839994 0.8577123 0.7354759 0.875694 0.8244863 0.8886416 0.7605671 0.779531 0.836758 0.840925 0.7594393 0.8015134 0.8574385 0.6915007 0.8038725 0.7295230 0.66631077 0.6579957 0.9030544 0.8923280 0.8783059 0.8118675 0.8409333 0.815322 1 0.785512 0.782201 -2.2148e-03 6 0.640366 0.619168 0.02119730 0.5126323 0.59388828 insignificant 1.0000 1.000000 insignificant 0.991039 1.1450e-01 insignificant 1 1.000000 insignificant -0.0567836 0.0623821 insignificant 1 insignificant 0.785512 0.7441520 0.03412884 6 0.640366 0.748806 -0.10844084 4.1939e-01 6.6369e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.7421e-01 3.9393e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.01701840 6.7051e-01 insignificant 1.0000e+00 insignificant 0.785638 0.836683 -0.0472688 9 0.638612 0.864138 -0.22552577 9.9994e-01 5.9363e-03 weaklyHypometh 1.0000e+00 3.9148e-01 insignificant 9.9999e-01 1.2750e-02 weaklyHypometh 1.0000e+00 0.7144549 insignificant -0.10447493 0.00722065 weaklyHypometh 0.424154 insignificant 0.782201 0.7441520 0.03879620 6 0.619168 0.748806 -0.1296381 1.6381e-01 9.8133e-01 insignificant 1.0000e+00 1.0000000 insignificant 1.8311e-01 0.99742850 insignificant 1.0000e+00 1.00000 insignificant 0.03976521 3.5540e-01 insignificant 1.0000e+00 insignificant 0.781861 0.836683 -0.0459444 6 0.593780 0.864138 -0.2703584 9.9840e-01 3.5651e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.1654e-01 6.9136e-01 insignificant 1.00000000 1.0000000 insignificant -0.04769132 1.7979e-01 insignificant 1.000000 insignificant 0.7437775 0.8366834 -0.0833036 6 0.732060 0.864138 -0.1320778 9.9999e-01 4.1667e-02 weaklyHypometh 1.0000e+00 3.6232e-01 insignificant 9.9914e-01 1.8830e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.08745653 6.7608e-02 insignificant 6.9863e-01 insignificant chr3 9880450 9881450 10995 RPUSD3 ENSG00000156990 0.7959257 356 10 0.786753 333 9 0.8336559 135 10 0.7205221 291 10 0.773299 181 10 0.823787 154 8 0.630456 177 8 0.855619 232 10 0.736335 196 10 0.821591 162 10 0.804365 559 11 0.6678227 87 4 0.829469 307 10 0.755886 146 10 0.8773118 155 6 0.754937 97 6 0.467133 426 5 0.7504882 217 10 0.7786658 108 10 0.839246 112 8 0.886003 64 6 0.7919002 72 7 0.7685189 227 7 0.7905983 110 9 0.7785295 120 6 0.7892528 283 11 0.693296 117 8 0.635897 51 3 0.7720696 255 10 0.749644 340 11 0.7677625 350 12 0.7070091 173 10 0.6985144 142 11 0.6937697 199 10 0.7455278 182 11 0.7002381 48 4 0.690056 191 10 0.6172114 232 11 0.837315 319 10 0.697892 301 10 0.660661 249 6 0.758971 261 9 0.724484 307 11 0.7870880 0.7260488 0.778884 0.8350247 0.7948175 0.804107 0.751581 0.7827344 0.7496877 0.7767747 0.8316497 0.6399377 0.7727817 0.7966380 0.8118635 0.767481 0.7267650 0.755024 0.7897822 0.862037 0.9472532 0.8754897 0.797967 0.8904893 0.8356210 0.8441915 0.803872 0.752538 0.793772 0.8431554 0.7845062 0.7220364 0.7201976 0.6698963 0.7782973 0.72104202 0.7741083 0.7658875 0.7821048 0.8475132 0.7859517 0.8187076 0.770584 2 0.821816 0.843591 -2.4945e-03 10 0.772867 0.657409 0.11545750 0.1365974 0.67713469 insignificant 1.0000 1.000000 insignificant 0.365138 3.4637e-01 insignificant 1 1.000000 insignificant 0.0042899 0.8767323 insignificant 1 insignificant 0.821921 0.7394366 0.08227002 10 0.779504 0.691693 0.08781156 2.9489e-12 8.5435e-01 weaklyHypermeth 6.7021e-11 1.0000e+00 weaklyHypermeth 3.3122e-03 4.5782e-01 weaklyHypermeth 5.3423e-02 1.0000000 weaklyHypermeth 0.07427711 1.1897e-02 weaklyHypermeth 2.0511e-01 insignificant 0.822474 0.782185 0.0232387 10 0.798600 0.717150 0.08145050 1.7741e-04 3.5001e-01 weaklyHypermeth 1.9713e-02 1.0000e+00 weaklyHypermeth 1.8975e-01 1.6513e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.02929884 0.44494990 insignificant 1.000000 insignificant 0.845155 0.7394366 0.09143306 10 0.698497 0.691693 0.0068046 4.6105e-05 9.5212e-01 weaklyHypermeth 6.2304e-04 1.0000000 weaklyHypermeth 3.2577e-02 0.60573879 weaklyHypermeth 3.1026e-01 1.00000 insignificant 0.06998726 1.2712e-02 weaklyHypermeth 2.2464e-01 insignificant 0.846583 0.782185 0.0383786 10 0.762568 0.717150 0.0454188 8.7080e-03 5.8769e-01 weaklyHypermeth 2.7278e-01 1.0000e+00 insignificant 1.2463e-01 2.5607e-01 insignificant 1.00000000 1.0000000 insignificant 0.02500899 4.9738e-01 insignificant 1.000000 insignificant 0.7408537 0.7820334 -0.0589754 10 0.710288 0.695392 0.0148966 9.0752e-01 4.6000e-03 weaklyHypometh 1.0000e+00 5.1685e-02 weaklyHypometh 8.1259e-01 2.0262e-02 weaklyHypometh 1.0000e+00 2.7814e-01 insignificant -0.04497827 2.3679e-01 insignificant 1.0000e+00 insignificant chr3 9931350 9932350 11001 IL17RE ENSG00000163701 0.153889 399 16 0.090909 76 9 0.195468 143 10 0.0040288 717 16 0.042125 146 10 0.203871 546 22 0.168639 179 10 0.164959 178 10 0.020979 113 10 0.059048 140 5 0.115738 237 11 0.018669 116 10 0.163462 59 5 0.058532 96 6 0.088626 194 10 0.048611 69 5 NA 0 0 0.162644 1165 21 0.013741 294 16 0.236896 394 21 0.089286 83 5 0.0033898 289 5 0.077679 148 11 0.033613 118 11 0.183756 935 10 0.153793 394 17 0.095328 212 10 0.127273 98 9 0.020495 219 10 0.1671593 253 17 0.084541 238 17 0.219596 332 17 0.1245421 109 10 0.004902 221 10 0.1324074 170 8 0.0000000 931 16 0.038138 131 10 0.1405384 434 17 0.114688 363 16 0.0047849 552 16 0.013922 332 16 0.20859 1150 16 0.041667 390 16 0.013294 0.000000 0.122193 0.0051642 0.014082 0.033093 0.027537 0.029387 0.031727 0.051440 0.023262 0.013341 0.019942 0.057401 0.0091236 0.022698 NA 0.024728 0.030166 0.014513 0.011395 0.0068961 0.027071 0.021057 0.023522 0.020073 0.013619 0.015564 0.019475 0.0018529 0.0090791 0.039778 0.0870854 0.0093843 0.0228184 0.0000000 0.015778 0.0072694 0.0025055 0.0084833 0.0062357 0.014979 0.000000 5 0.054646 0.038043 0.00707973 10 0.165203 0.166253 -0.0010502 0.403180 9.9897e-01 insignificant 1 1.0000e+00 insignificant 0.544802 9.9996e-01 insignificant 1 1.000000 insignificant 0.0011743 0.964011 insignificant 1 insignificant 0.054740 0.016558 0.0206375 16 0.184265 0.1318080 0.0524569 5.6017e-03 1.0000e+00 weaklyHypermeth 8.6180e-02 1.0000e+00 weaklyHypermeth 9.5204e-02 1.0000e+00 insignificant 1.0000e+00 1.000000 insignificant 0.0324119 3.3484e-01 insignificant 1.0000e+00 insignificant 0.054307 0.011151 1.3555e-02 16 0.208582 0.232807 -0.0242254 1.9394e-01 0.94304133 insignificant 1.0000e+00 1.000000 insignificant 4.0233e-01 0.99424376 insignificant 1.0000e+00 1.00000 insignificant 0.0291028 5.1333e-01 insignificant 1.000000 insignificant 0.038182 0.016575 0.021593 10 0.192854 0.1370804 0.0557735 1.4259e-01 9.9984e-01 insignificant 1.0000e+00 1.00000000 insignificant 5.7828e-01 0.9999205 insignificant 1.0000e+00 1 insignificant 0.0312376 3.7011e-01 insignificant 1.0000e+00 insignificant 0.038426 0.011507 0.0073887 10 0.222667 0.266163 -0.0434961 8.8195e-01 0.9951420 insignificant 1.0000e+00 1.00000 insignificant 9.9824e-01 0.98853935 insignificant 1.0000e+00 1.00000 insignificant 0.02792855 0.5382231 insignificant 1.00000 insignificant 0.016203 0.011151 -4.6171e-03 16 0.1466822 0.232807 -0.086125 9.9958e-01 3.1342e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.99996265 7.6986e-01 insignificant 1.00000 1.0000e+00 insignificant -0.0033091 9.4547e-01 insignificant 1.000000 insignificant chr3 10207050 10208050 11009 IRAK2 ENSG00000134070 0.742646 272 10 0.696500 56 3 0.573707 88 5 0.7513077 224 10 0.661028 82 4 0.681506 167 10 0.561942 135 5 0.847713 97 7 0.762096 56 3 0.643609 83 5 0.839681 196 7 0.524802 53 3 0.761387 128 5 0.494709 49 3 0.758408 99 5 0.781974 56 3 0.556056 958 7 0.759771 232 10 0.834921 131 9 0.705980 183 9 0.826515 40 5 0.9121573 45 6 0.638643 177 10 0.651042 56 5 0.859231 59 3 0.724079 223 11 0.692424 42 4 0.655000 38 4 0.760668 101 5 0.7381600 202 11 0.825300 215 11 0.725266 260 10 0.6528799 66 5 0.585282 103 7 0.5588889 133 10 0.9351852 57 3 0.710307 70 3 0.6561083 263 14 0.741735 285 13 0.7005067 280 11 0.659226 239 10 0.61009 213 10 0.829400 209 10 0.849946 0.566008 0.773081 0.8309972 0.792273 0.792003 0.784708 0.799063 0.790098 0.813199 0.846210 0.686956 0.836436 0.798418 0.8844613 0.819548 0.739295 0.854075 0.799910 0.880376 0.767809 0.7503181 0.791973 0.859005 0.916245 0.926387 0.904570 0.813306 0.833879 0.7839640 0.8902008 0.890002 0.7032337 0.7064496 0.6995968 0.9175627 0.819472 0.8012988 0.8948760 0.8792207 0.8809326 0.792286 0.915824 1 0.763528 0.793956 -0.02750864 11 0.668744 0.699117 -0.0303734 0.986325 2.3519e-02 weaklyHypometh 1 1.0000e+00 insignificant 0.965624 7.2859e-02 insignificant 1 1.000000 insignificant -0.0537202 0.136633 insignificant 1 insignificant 0.763528 0.723988 0.0393030 9 0.668744 0.6186152 0.0501286 7.1027e-02 9.9775e-01 insignificant 8.5575e-01 1.0000e+00 insignificant 6.6160e-01 9.0078e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0138783 8.2384e-01 insignificant 1.0000e+00 insignificant 0.764018 0.803426 -3.6982e-02 10 0.673327 0.687255 -0.0139284 7.1186e-01 0.02418545 weaklyHypometh 1.0000e+00 1.000000 insignificant 7.6152e-01 0.12469580 insignificant 1.0000e+00 1.00000 insignificant -0.0112051 8.0732e-01 insignificant 1.000000 insignificant 0.793956 0.723988 0.064893 9 0.699117 0.6186152 0.0805020 6.6269e-04 9.9995e-01 weaklyHypermeth 1.2994e-02 1.00000000 weaklyHypermeth 9.8479e-02 0.9965700 insignificant 1.0000e+00 1 insignificant 0.0675985 3.0089e-01 insignificant 1.0000e+00 insignificant 0.795848 0.803426 0.0066702 11 0.709361 0.687255 0.0221063 2.4627e-02 0.2708205 weaklyHypermeth 1.0000e+00 1.00000 insignificant 1.4579e-01 0.36782134 insignificant 1.0000e+00 1.00000 insignificant 0.04251507 0.3747593 insignificant 1.00000 insignificant 0.726346 0.803426 -6.7618e-02 8 0.6331895 0.687255 -0.054066 9.6509e-01 9.3370e-03 weaklyHypometh 1.0000000 1.6673e-01 insignificant 0.94982609 8.8268e-02 insignificant 1.00000 1.0000e+00 insignificant -0.0250834 7.1545e-01 insignificant 1.000000 insignificant chr3 10214450 10215450 11012 IRAK2 ENSG00000134070 0.819056 131 7 0.625678 135 6 0.691575 66 6 0.7323562 134 7 0.815625 40 6 0.781445 218 7 0.716412 63 6 0.812119 99 6 0.939423 42 3 0.805672 57 4 0.730785 180 6 0.577273 34 2 0.789331 68 6 0.876543 46 6 0.696429 45 3 0.752381 27 2 0.729933 375 4 0.806584 147 7 0.720317 69 6 0.828601 158 6 0.530844 52 6 0.7182540 33 4 0.637302 54 4 0.721501 52 6 0.743976 80 5 0.739780 169 7 0.688228 70 6 0.645833 35 4 0.822606 63 6 0.5773369 142 6 0.719556 143 6 0.808189 161 6 0.6520935 124 6 0.578081 72 6 0.7866736 128 6 0.6400000 22 2 0.654246 77 6 0.6144737 124 6 0.825693 93 6 0.7863629 137 7 0.733552 145 6 0.78571 41 6 0.818376 109 7 0.807889 0.581457 0.708535 0.7688540 0.763699 0.746033 0.662997 0.798607 0.895574 0.741913 0.766790 0.662126 0.805179 0.799087 0.6318493 0.682192 0.750469 0.819998 0.689883 0.722932 0.704679 0.6771037 0.667275 0.778302 0.772634 0.735231 0.865677 0.675799 0.786042 0.6724831 0.7571089 0.776205 0.6267083 0.5886382 0.7507318 0.6451384 0.692787 0.6908796 0.7995973 0.7593739 0.7715742 0.739726 0.818078 2 0.752109 0.754753 -0.00940719 6 0.786672 0.615713 0.1709594 0.419544 8.1565e-01 insignificant 1 1.0000e+00 insignificant 0.186777 8.1235e-01 insignificant 1 1.000000 insignificant 0.0662598 0.044161 weaklyHypermeth 1 insignificant 0.751760 0.681901 0.0613376 6 0.739266 0.6357851 0.1034809 3.7586e-04 9.9288e-01 weaklyHypermeth 7.9970e-03 1.0000e+00 weaklyHypermeth 6.8092e-04 9.9749e-01 weaklyHypermeth 2.6189e-02 1.000000 weaklyHypermeth 0.1081156 1.1047e-02 weaklyHypermeth 3.9453e-01 insignificant 0.751760 0.779048 -4.0642e-02 6 0.739266 0.732455 0.0068112 6.1615e-01 0.10322448 insignificant 1.0000e+00 1.000000 insignificant 8.3572e-01 0.35837026 insignificant 1.0000e+00 1.00000 insignificant -0.0275628 2.8157e-01 insignificant 1.000000 insignificant 0.755725 0.681901 0.066080 6 0.641427 0.6357851 0.0056416 4.2046e-03 9.4189e-01 weaklyHypermeth 7.0076e-02 1.00000000 weaklyHypermeth 9.6219e-03 0.9389229 weaklyHypermeth 2.1382e-01 1 insignificant 0.0418558 2.9432e-01 insignificant 1.0000e+00 insignificant 0.755725 0.779048 -0.0298017 6 0.641427 0.732455 -0.0910281 8.1790e-01 0.3989240 insignificant 1.0000e+00 1.00000 insignificant 9.0107e-01 0.22701904 insignificant 1.0000e+00 1.00000 insignificant -0.09382261 0.0066008 weaklyHypometh 0.66008 insignificant 0.681901 0.779048 -9.9409e-02 6 0.6357851 0.732455 -0.096670 9.9513e-01 1.7702e-03 weaklyHypometh 1.0000000 4.5390e-02 weaklyHypometh 0.99965363 5.0808e-03 weaklyHypometh 1.00000 1.7557e-01 insignificant -0.1356784 3.7995e-03 weaklyHypometh 0.223501 insignificant chr3 10251450 10252450 11017 ENSG00000222348 0.806877 161 4 0.728509 149 4 0.690359 70 4 0.7664225 89 6 0.787879 30 2 0.713268 186 6 0.586081 52 4 0.742677 119 4 0.788462 52 4 0.794118 67 4 0.801990 145 4 0.750000 34 2 0.918998 100 4 NA 0 0 0.907169 64 4 0.818182 26 2 0.560049 41 4 0.804762 74 4 0.766048 116 6 0.594428 160 6 0.674679 32 2 0.7631313 41 4 0.718615 103 4 0.810606 29 3 0.928571 34 4 0.727843 259 6 0.800416 65 4 0.825893 17 2 0.734816 107 4 0.7211677 269 6 0.619849 301 6 0.747792 270 6 0.8137582 110 4 0.711012 89 4 0.7064807 227 7 0.7819205 88 6 0.761161 42 4 0.8898317 266 6 0.746913 108 6 0.7930183 178 6 0.717015 135 6 0.82413 87 4 0.698573 141 7 0.640495 0.644917 0.607149 0.7598500 0.840183 0.766265 0.543530 0.708193 0.736565 0.689766 0.731385 0.623288 0.890235 NA 0.8601178 0.726027 0.576786 0.705806 0.799711 0.735222 0.718695 0.7207002 0.709189 0.754566 0.892368 0.760223 0.724521 0.737647 0.679755 0.7482826 0.7410740 0.714041 0.7264124 0.5805202 0.6842418 0.6277723 0.640105 0.7628916 0.8435594 0.7616274 0.8118338 0.770177 0.755527 2 0.787074 0.789784 -0.00326264 4 0.759835 0.704113 0.0557219 0.326259 8.1278e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.442284 8.8809e-01 lowCoverage 1 1.000000 lowCoverage -0.0021004 0.947583 lowCoverage 1 lowCoverage 0.787074 0.763990 -0.0068852 4 0.759835 0.7688054 -0.0089701 4.5937e-01 1.3374e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 6.2290e-01 1.4087e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage -0.0233460 5.2511e-01 lowCoverage 1.0000e+00 lowCoverage 0.787074 0.780864 -4.1214e-02 4 0.759835 0.748044 0.0117914 7.3530e-01 0.31632651 lowCoverage 1.0000e+00 1.000000 lowCoverage 6.9322e-01 0.67126695 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.0019160 9.5329e-01 lowCoverage 1.000000 lowCoverage 0.789784 0.763990 -0.012582 4 0.704113 0.7688054 -0.0646920 6.4729e-02 2.0838e-03 lowCoverage 7.7986e-01 0.34730688 lowCoverage 2.4774e-01 0.0144171 lowCoverage 1.0000e+00 1 lowCoverage -0.0212456 5.6859e-01 lowCoverage 1.0000e+00 lowCoverage 0.789784 0.780864 -0.0351285 4 0.704113 0.748044 -0.0439305 9.7608e-01 0.0283214 lowCoverage 1.0000e+00 1.00000 lowCoverage 9.7261e-01 0.08993102 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.00018438 0.9955921 lowCoverage 1.00000 lowCoverage 0.763990 0.780864 -4.0145e-05 6 0.7688054 0.748044 0.020761 2.0714e-02 1.5602e-01 inconclusive 1.0000000 1.0000e+00 insignificant 0.03982146 2.4024e-01 inconclusive 1.00000 1.0000e+00 insignificant 0.0214300 5.7203e-01 insignificant 1.000000 insignificant chr3 11240650 11241650 11037 SLC6A1 ENSG00000157103 0.886905 81 7 0.698167 96 7 0.704762 43 4 0.8778999 151 7 0.629293 48 4 0.856678 157 7 0.591837 33 4 0.880971 134 7 0.667347 59 4 0.916667 51 4 0.841184 175 7 0.857143 22 0 0.827268 60 7 0.979592 46 7 0.857677 83 7 0.638889 17 0 0.833333 18 0 0.901472 123 7 0.864796 59 7 0.866074 99 7 0.923810 38 5 0.7913265 61 7 0.888492 64 7 0.937500 26 1 0.849531 66 7 0.876984 91 7 0.839583 39 6 0.888889 20 0 0.822222 68 7 0.8766440 111 7 0.705357 76 4 0.848519 167 7 0.5847070 64 4 0.779221 56 4 0.8211501 77 4 0.7500000 4 0 0.810417 37 5 0.8786214 68 7 0.825205 70 7 0.8867932 136 7 0.900170 131 7 0.78040 63 7 0.813023 112 7 0.866667 0.627068 0.586667 0.8790598 0.732727 0.795685 0.715548 0.802414 0.591429 0.883333 0.764644 0.875000 0.776925 0.971429 0.7889499 0.657685 0.791018 0.904770 0.810714 0.814886 0.893333 0.8128571 0.871389 0.900000 0.835177 0.844444 0.823333 0.755142 0.932222 0.8384127 0.6625000 0.776380 0.5855311 0.6909091 0.7791301 0.7884167 0.751667 0.8300699 0.7883221 0.8551469 0.8758631 0.861136 0.767399 0 0.800000 0.828295 -0.01509134 7 0.804953 0.862675 -0.0577219 0.928896 4.6795e-01 insignificant 1 1.0000e+00 insignificant 0.997179 1.9679e-01 insignificant 1 1.000000 insignificant -0.0451738 0.149711 insignificant 1 insignificant 0.800129 0.725490 0.0648769 4 0.811059 0.7259622 0.0850968 5.5970e-02 6.6060e-01 lowCoverage 6.9962e-01 1.0000e+00 lowCoverage 4.1427e-01 6.7161e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 0.0382117 4.4682e-01 lowCoverage 1.0000e+00 lowCoverage 0.800389 0.845703 -3.7240e-02 7 0.818691 0.756656 0.0620353 7.2026e-01 0.14278631 insignificant 1.0000e+00 1.000000 insignificant 5.6869e-01 0.21051411 insignificant 1.0000e+00 1.00000 insignificant -0.0322200 3.5245e-01 insignificant 1.000000 insignificant 0.828087 0.725490 0.082922 4 0.847417 0.7259622 0.1214544 4.1657e-02 9.5330e-01 lowCoverage 5.3406e-01 1.00000000 lowCoverage 2.2298e-01 0.9196972 lowCoverage 1.0000e+00 1 lowCoverage 0.0833855 1.0599e-01 lowCoverage 1.0000e+00 lowCoverage 0.828467 0.845703 -0.0223774 7 0.859594 0.756656 0.1029376 9.7099e-01 0.4527055 insignificant 1.0000e+00 1.00000 insignificant 4.3065e-01 0.82789231 insignificant 1.0000e+00 1.00000 insignificant 0.01295373 0.6647691 insignificant 1.00000 insignificant 0.727869 0.845703 -1.0134e-01 4 0.8167075 0.756656 0.060051 9.5966e-01 3.3035e-02 lowCoverage 1.0000000 4.3467e-01 lowCoverage 0.87461577 3.1634e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage -0.0704317 1.7436e-01 lowCoverage 1.000000 lowCoverage chr3 12460650 12461650 11076 PPARG ENSG00000132170 0.305235 245 6 0.162022 222 6 0.321251 165 6 0.2297188 282 6 0.197002 102 6 0.241477 310 6 0.202239 202 6 0.274883 170 6 0.208254 185 6 0.110417 122 6 0.417192 235 6 0.224008 114 6 0.106261 191 6 0.355114 38 2 0.257563 163 6 0.336219 64 6 0.246476 128 5 0.189845 301 6 0.178187 187 6 0.135320 233 6 0.462376 108 6 0.0908276 190 6 0.374080 161 6 0.132756 121 6 0.413452 142 6 0.189926 314 6 0.176105 179 6 0.357143 81 6 0.252009 146 6 0.1943937 257 6 0.125789 300 6 0.350060 259 6 0.3713118 159 6 0.529499 101 6 0.7547345 244 3 0.1632200 113 5 0.448836 191 7 0.4057175 193 6 0.198214 397 6 0.1474012 276 6 0.237577 235 6 0.10194 284 6 0.129250 358 6 0.278784 0.185771 0.335043 0.1768275 0.231077 0.255926 0.207178 0.163071 0.167194 0.124398 0.297786 0.226174 0.090410 0.227946 0.2567226 0.275901 0.169514 0.151895 0.177526 0.174712 0.445594 0.0647447 0.379557 0.154412 0.395024 0.169175 0.232822 0.397056 0.217443 0.1707522 0.1192511 0.394349 0.3519973 0.6803219 0.6616788 0.2080103 0.601783 0.3169128 0.1520002 0.1230306 0.1781425 0.080613 0.137894 6 0.217546 0.242693 -0.02071639 6 0.208511 0.183370 0.0251414 0.949566 4.9608e-01 insignificant 1 1.0000e+00 insignificant 0.975180 2.2298e-01 insignificant 1 1.000000 insignificant -0.0249756 0.547875 insignificant 1 insignificant 0.217605 0.518482 -0.2925626 6 0.238298 0.3823494 -0.1440512 9.9758e-01 1.5125e-12 hypomethylated 1.0000e+00 5.0417e-10 hypomethylated 9.9910e-01 1.6365e-05 hypomethylated 1.0000e+00 0.016365 hypomethylated -0.2106191 4.4757e-02 weaklyHypometh 1.0000e+00 insignificant 0.217605 0.141290 6.1073e-02 6 0.238298 0.143080 0.0952177 3.3453e-04 0.58689930 weaklyHypermeth 4.7790e-02 1.000000 weaklyHypermeth 4.3932e-03 0.51106959 weaklyHypermeth 4.8813e-01 1.00000 insignificant 0.0720573 4.2140e-02 weaklyHypermeth 1.000000 insignificant 0.242800 0.518482 -0.278022 6 0.209565 0.3823494 -0.1727842 9.9996e-01 3.4666e-06 hypomethylated 1.0000e+00 0.00086665 hypomethylated 9.9946e-01 0.0072236 weaklyHypometh 1.0000e+00 1 insignificant -0.1856435 7.0332e-02 insignificant 1.0000e+00 insignificant 0.242800 0.141290 0.0847763 6 0.209565 0.143080 0.0664847 3.5658e-03 0.9671992 weaklyHypermeth 2.9715e-01 1.00000 insignificant 2.8378e-03 0.97719722 weaklyHypermeth 3.1532e-01 1.00000 insignificant 0.09703297 0.0426476 weaklyHypermeth 1.00000 insignificant 0.518482 0.141290 3.6407e-01 6 0.3823494 0.143080 0.239269 2.5797e-06 1.0000e+00 hypermethylated 0.0012898 1.0000e+00 hypermethylated 0.00035886 9.9993e-01 hypermethylated 0.17943 1.0000e+00 insignificant 0.2826764 1.4788e-02 weaklyHypermeth 0.509923 insignificant chr3 12647950 12648950 11083 MKRN2 ENSG00000075975 0.804937 271 6 0.656349 62 6 0.738716 94 6 0.7282170 116 6 0.831650 58 6 0.813407 216 6 0.808817 99 6 0.813301 68 5 0.651494 78 6 0.771581 60 5 0.788144 200 6 0.829085 83 6 0.792196 79 6 NA 0 0 0.831127 117 6 0.733197 63 6 0.711871 74 6 0.800399 116 6 0.735949 127 6 0.860160 207 6 0.801190 48 6 0.8221710 145 6 0.853005 130 6 0.800595 98 6 0.908642 99 6 0.733005 82 6 0.827206 177 6 0.844444 42 4 0.700036 80 6 0.7985752 111 6 0.832176 112 6 0.804234 306 6 0.8221501 52 6 0.716321 101 6 0.7558507 119 6 0.7666576 111 6 0.794442 98 6 0.6215100 66 3 0.858047 503 6 0.8744672 401 6 0.847712 230 6 0.80755 208 6 0.812677 293 6 0.816035 0.679673 0.747956 0.7667787 0.854136 0.832467 0.804621 0.818712 0.683671 0.770050 0.798328 0.838207 0.797958 NA 0.8420207 0.730679 0.720363 0.810675 0.746283 0.858105 0.811726 0.8193314 0.844349 0.819619 0.883341 0.749973 0.842591 0.863142 0.689716 0.7912939 0.8527900 0.809196 0.8301238 0.7077020 0.7740398 0.7725303 0.826534 0.6440391 0.8682379 0.8836506 0.8536205 0.816988 0.823200 5 0.795704 0.820979 -0.02473040 6 0.788290 0.817248 -0.0289576 0.922268 2.3805e-02 weaklyHypometh 1 1.0000e+00 insignificant 0.972101 2.1910e-02 weaklyHypometh 1 1.000000 insignificant -0.0367243 0.087346 insignificant 1 insignificant 0.795704 0.764168 0.0315305 6 0.788290 0.7606072 0.0276827 8.1877e-03 6.9959e-01 weaklyHypermeth 1.2220e-01 1.0000e+00 insignificant 2.2743e-01 7.9961e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0275606 4.1509e-01 insignificant 1.0000e+00 insignificant 0.795704 0.857492 -5.7348e-02 6 0.788290 0.847131 -0.0588406 9.9947e-01 0.00136392 weaklyHypometh 1.0000e+00 0.272784 insignificant 9.9922e-01 0.00195129 weaklyHypometh 1.0000e+00 0.40302 insignificant -0.0663750 3.3449e-03 weaklyHypometh 0.334485 insignificant 0.820979 0.764168 0.055612 6 0.817248 0.7606072 0.0566403 1.8342e-03 9.8202e-01 weaklyHypermeth 3.1624e-02 1.00000000 weaklyHypermeth 5.6194e-02 0.9756429 insignificant 8.5142e-01 1 insignificant 0.0642849 8.5797e-02 insignificant 1.0000e+00 insignificant 0.820979 0.857492 -0.0345753 6 0.817248 0.847131 -0.0298830 9.8140e-01 0.0543779 insignificant 1.0000e+00 1.00000 insignificant 9.8340e-01 0.15212476 insignificant 1.0000e+00 1.00000 insignificant -0.02965069 0.1665563 insignificant 1.00000 insignificant 0.764168 0.857492 -8.7657e-02 6 0.7606072 0.847131 -0.086523 9.9928e-01 8.7367e-04 weaklyHypometh 1.0000000 2.4269e-02 weaklyHypometh 0.99969841 1.5789e-02 weaklyHypometh 1.00000 3.6719e-01 insignificant -0.0939355 2.1397e-02 weaklyHypometh 0.668656 insignificant chr3 12908450 12909450 11098 SNORA7A ENSG00000144713 0.516178 264 6 0.460184 574 6 0.273028 352 6 0.5408988 287 6 0.294973 235 6 0.458703 466 6 0.359078 349 7 0.449678 389 7 0.401474 290 6 0.332346 288 6 0.455806 439 6 0.463730 225 6 0.428452 271 6 0.409000 236 6 0.329636 514 6 0.643771 165 3 0.000000 2 0 0.467458 316 6 0.351588 649 6 0.357816 388 6 0.372066 120 6 0.3279239 88 7 0.480501 245 6 0.394634 189 6 0.474983 116 6 0.324327 638 6 0.362548 294 6 0.342318 157 7 0.322676 610 6 0.2773785 779 6 0.392035 626 6 0.540830 308 6 0.0033333 259 6 0.061330 208 6 0.0015432 526 6 0.6666667 14 1 0.060901 323 7 0.1488095 488 6 0.334102 322 6 0.4161856 272 6 0.437441 271 6 0.34813 233 6 0.378431 234 6 0.543654 0.539839 0.379220 0.5613347 0.429559 0.508649 0.498442 0.532784 0.456734 0.477118 0.513421 0.449389 0.419360 0.493729 0.4721110 0.434477 NA 0.467818 0.529999 0.511918 0.523121 0.4023713 0.603933 0.472987 0.532365 0.457670 0.513617 0.437854 0.473424 0.4092096 0.4356371 0.591119 0.0038272 0.0845172 0.0019624 0.4038580 0.035625 0.0063615 0.3815253 0.4712813 0.4400842 0.448333 0.439218 6 0.542021 0.481775 0.02791817 6 0.398805 0.371493 0.0273120 0.123200 9.6666e-01 insignificant 1 1.0000e+00 insignificant 0.171141 6.4610e-01 insignificant 1 1.000000 insignificant 0.0153383 0.678120 insignificant 1 insignificant 0.542021 0.025303 0.4880014 6 0.398805 0.0594947 0.3393102 1.2464e-38 1.0000e+00 hypermethylated 3.1161e-36 1.0000e+00 hypermethylated 3.5367e-10 9.9999e-01 hypermethylated 5.8945e-08 1.000000 hypermethylated 0.2425928 6.7716e-02 insignificant 1.0000e+00 insignificant 0.542021 0.551051 5.5023e-02 6 0.398805 0.385003 0.0138019 5.8979e-03 0.86800658 weaklyHypermeth 4.9149e-01 1.000000 insignificant 2.9182e-03 0.95747513 weaklyHypermeth 3.6477e-01 1.00000 insignificant 0.0168324 6.3504e-01 insignificant 1.000000 insignificant 0.481775 0.025303 0.447334 6 0.371493 0.0594947 0.3119982 4.9051e-26 9.9996e-01 hypermethylated 9.8102e-24 1.00000000 hypermethylated 5.2862e-08 0.9996490 hypermethylated 7.5517e-06 1 hypermethylated 0.2272545 8.1539e-02 insignificant 1.0000e+00 insignificant 0.481775 0.551051 0.0251220 6 0.371493 0.385003 -0.0135102 2.2346e-01 0.6730811 insignificant 1.0000e+00 1.00000 insignificant 8.8950e-02 0.84415816 insignificant 1.0000e+00 1.00000 insignificant 0.00149411 0.9607811 insignificant 1.00000 insignificant 0.025303 0.551051 -5.0454e-01 6 0.0594947 0.385003 -0.325508 1.0000e+00 1.5592e-16 hypomethylated 1.0000000 7.7959e-14 hypomethylated 0.99999966 2.4468e-04 hypomethylated 1.00000 1.4393e-02 hypomethylated -0.2257604 8.2949e-02 insignificant 1.000000 insignificant chr3 12969050 12970050 11101 SNORA7A ENSG00000144713 0.929757 153 13 0.893916 384 15 0.773115 364 15 0.9679997 103 8 0.908612 141 8 0.874056 194 13 0.755126 311 8 0.883152 167 10 0.866116 203 10 0.905598 186 10 0.934261 300 10 0.690105 263 8 0.965426 282 10 NA 0 0 0.925570 278 10 0.749118 165 8 0.855406 239 9 0.856902 66 5 0.940362 249 10 0.905878 187 14 0.971217 159 10 0.8941799 36 4 0.878616 217 14 0.928333 65 8 1.000000 11 0 0.906344 367 14 0.883074 103 10 0.734893 96 7 0.906477 247 10 0.9369950 384 15 0.948351 302 14 0.910011 311 14 0.7098989 373 14 0.857213 260 10 0.9909091 157 11 0.9200000 34 3 0.878175 74 6 0.8421417 354 15 0.813585 133 9 0.8214603 182 14 0.955219 89 5 0.88788 134 8 0.845085 116 7 0.919372 0.895579 0.834094 0.9507498 0.893964 0.852419 0.829201 0.898857 0.890653 0.904253 0.929735 0.758207 0.960494 NA 0.9172496 0.795112 0.855759 0.922396 0.938017 0.966660 0.981048 0.9063797 0.884396 0.913563 0.993572 0.918718 0.894231 0.786146 0.905060 0.9701328 0.9577852 0.959424 0.7152214 0.8629171 0.9324166 0.9241379 0.872250 0.9072275 0.8904356 0.9143908 0.9297109 0.859740 0.897186 1 0.909327 0.928634 -0.02963227 10 0.866941 0.915825 -0.0488842 0.998947 2.6688e-03 weaklyHypometh 1 8.8962e-01 insignificant 0.993748 3.5706e-02 weaklyHypometh 1 1.000000 insignificant -0.0355510 0.182663 insignificant 1 insignificant 0.909327 0.850639 0.0480252 10 0.866941 0.8136165 0.0533242 3.8590e-04 9.3430e-01 weaklyHypermeth 8.0396e-03 1.0000e+00 weaklyHypermeth 6.4276e-01 5.7673e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0062670 8.8576e-01 insignificant 1.0000e+00 insignificant 0.909327 0.892966 -2.7469e-03 9 0.866941 0.859890 0.0070510 4.5307e-01 0.59945570 insignificant 1.0000e+00 1.000000 insignificant 7.3904e-01 0.37381717 insignificant 1.0000e+00 1.00000 insignificant 0.0080101 8.0614e-01 insignificant 1.000000 insignificant 0.928634 0.850639 0.079811 13 0.915825 0.8136165 0.1022084 3.8237e-06 9.9767e-01 weaklyHypermeth 1.5295e-04 1.00000000 weaklyHypermeth 1.6452e-01 0.9570556 insignificant 1.0000e+00 1 insignificant 0.0418180 3.5638e-01 insignificant 1.0000e+00 insignificant 0.928634 0.892966 0.0371400 9 0.915825 0.859890 0.0559352 1.2534e-02 0.8856026 weaklyHypermeth 8.9528e-01 1.00000 insignificant 3.8424e-01 0.77045621 insignificant 1.0000e+00 1.00000 insignificant 0.04356113 0.2110345 insignificant 1.00000 insignificant 0.850639 0.892966 -5.2500e-02 10 0.8136165 0.859890 -0.046273 9.6746e-01 6.5217e-02 insignificant 1.0000000 8.0514e-01 insignificant 0.89117966 3.3088e-01 insignificant 1.00000 1.0000e+00 insignificant 0.0017431 9.7079e-01 insignificant 1.000000 insignificant chr3 13038450 13039450 11108 IQSEC1 ENSG00000144711 0.660145 234 12 0.553377 235 16 0.457121 237 15 0.5826969 229 10 0.468084 229 14 0.628415 160 13 0.563073 200 16 0.463772 240 17 0.528368 185 11 0.540500 183 14 0.753510 362 17 0.565156 116 11 0.473474 285 15 0.467588 87 9 0.499581 218 14 0.472448 90 7 0.917222 46 5 0.495247 270 12 0.559978 267 17 0.470460 234 10 0.744710 122 8 0.1948413 45 6 0.706623 212 18 0.716931 99 7 0.505490 208 10 0.625748 392 18 0.548220 231 14 0.472420 71 5 0.513119 175 10 0.6516656 302 13 0.659686 347 14 0.772294 399 17 0.1378661 321 13 0.133495 269 12 0.1923584 310 12 0.5869565 118 4 0.204958 309 21 0.3092959 578 18 0.292921 322 12 0.4668524 285 13 0.382647 260 12 0.32354 173 9 0.439533 259 12 0.559124 0.385224 0.398609 0.4412940 0.441479 0.672380 0.447100 0.288104 0.269639 0.538816 0.690913 0.388803 0.305062 0.531215 0.3318127 0.531374 NA 0.222412 0.308006 0.287909 0.813452 0.1973875 0.640160 0.463737 0.739750 0.532504 0.481428 0.498077 0.354711 0.4004009 0.4856187 0.855162 0.0633001 0.0524225 0.0736727 0.1449944 0.114242 0.1390918 0.2140846 0.2048531 0.1503758 0.101349 0.272539 2 0.543727 0.645385 -0.15101427 13 0.527712 0.639338 -0.1116257 0.999504 1.0032e-08 weaklyHypometh 1 1.0032e-05 weaklyHypometh 0.999938 9.7369e-04 weaklyHypometh 1 0.486844 insignificant -0.0366350 0.496776 insignificant 1 insignificant 0.543659 0.146085 0.3945805 16 0.522415 0.1478588 0.3745558 5.2049e-50 1.0000e+00 hypermethylated 5.2049e-47 1.0000e+00 hypermethylated 7.3647e-20 9.9999e-01 hypermethylated 7.3647e-17 1.000000 hypermethylated 0.2951891 6.6420e-03 weaklyHypermeth 3.1628e-01 insignificant 0.543881 0.248844 2.0631e-01 11 0.544123 0.424878 0.1192448 8.5511e-10 0.99672289 hypermethylated 2.1378e-07 1.000000 hypermethylated 1.4993e-07 0.94369560 hypermethylated 4.9975e-05 1.00000 hypermethylated 0.1749121 2.0930e-03 weaklyHypermeth 0.275653 insignificant 0.645360 0.146982 0.530052 14 0.638095 0.1865925 0.4515029 2.3290e-56 1.0000e+00 hypermethylated 2.3290e-53 1.00000000 hypermethylated 1.3066e-16 0.9999994 hypermethylated 1.3066e-13 1 hypermethylated 0.3318241 3.0484e-03 weaklyHypermeth 1.9053e-01 insignificant 0.645360 0.248844 0.3792051 12 0.638095 0.424878 0.2132172 8.3335e-22 0.9997794 hypermethylated 8.3335e-19 1.00000 hypermethylated 1.2264e-09 0.99389811 hypermethylated 1.2264e-06 1.00000 hypermethylated 0.21154709 0.0021173 weaklyHypermeth 0.42347 insignificant 0.146982 0.248844 -1.8346e-01 12 0.1865925 0.424878 -0.238286 1.0000e+00 4.5874e-16 weaklyHypometh 1.0000000 1.5291e-13 weaklyHypometh 1.00000000 3.2898e-08 weaklyHypometh 1.00000 1.0966e-05 weaklyHypometh -0.1202770 1.6488e-01 insignificant 1.000000 insignificant chr3 13250950 13251950 11109 IQSEC1 ENSG00000144711 0.729237 252 5 0.748039 91 5 0.681485 99 6 0.7682109 267 5 0.898990 32 2 0.565591 282 6 0.752620 81 5 0.715891 117 5 0.587949 68 5 0.835986 65 5 0.714948 157 5 0.546667 49 3 0.715722 98 5 NA 0 0 0.660234 95 5 0.688215 41 5 0.679365 37 4 0.299239 317 5 0.705174 79 5 0.831034 224 6 0.775000 70 5 0.4394986 150 5 0.576143 130 5 0.777132 71 5 0.668166 97 5 0.821640 169 5 0.673282 71 5 0.541667 32 3 0.825156 83 5 0.8041671 153 6 0.708168 155 5 0.761073 258 6 0.0142857 144 5 0.028077 128 5 0.0000000 102 4 0.0000000 77 5 0.035088 62 5 0.0019841 193 5 0.439179 255 5 0.7134206 269 5 0.595208 234 5 0.65714 265 5 0.711245 307 5 0.687418 0.713317 0.703312 0.7345890 0.871404 0.782857 0.771341 0.748115 0.614155 0.819158 0.775120 0.549408 0.644910 NA 0.6589901 0.665426 0.678914 0.497782 0.720957 0.776194 0.839721 0.3417398 0.771726 0.738021 0.718355 0.795373 0.717728 0.687394 0.788007 0.7832579 0.7445632 0.760179 0.0239304 0.0369094 0.0238705 0.0000000 0.058776 0.0044316 0.6170548 0.6035249 0.6107791 0.531261 0.545257 5 0.709914 0.731063 -0.02768479 5 0.573106 0.643320 -0.0702141 0.923595 5.0169e-01 insignificant 1 1.0000e+00 insignificant 0.932070 4.2675e-01 insignificant 1 1.000000 insignificant -0.0068227 0.884114 lowCoverage 1 lowCoverage 0.710086 0.016997 0.7036251 5 0.582245 0.0097291 0.5725155 1.8624e-48 1.0000e+00 hypermethylated 9.3120e-46 1.0000e+00 hypermethylated 3.4383e-15 1.0000e+00 hypermethylated 1.7191e-12 1.000000 hypermethylated 0.6775291 2.4199e-15 lowCoverage 2.4199e-12 lowCoverage 0.710086 0.583898 1.3331e-01 5 0.582245 0.657872 -0.0756271 3.9989e-04 0.65557003 weaklyHypermeth 4.9986e-02 1.000000 weaklyHypermeth 2.2409e-03 0.85470943 weaklyHypermeth 3.2013e-01 1.00000 insignificant 0.0675291 2.8909e-01 lowCoverage 1.000000 lowCoverage 0.731572 0.016997 0.723935 5 0.723735 0.0097291 0.7140063 7.5775e-34 1.0000e+00 hypermethylated 3.7887e-31 1.00000000 hypermethylated 3.5176e-13 1.0000000 hypermethylated 1.1725e-10 1 hypermethylated 0.6843519 3.9439e-10 lowCoverage 1.9719e-07 lowCoverage 0.731572 0.583898 0.1553370 5 0.723735 0.657872 0.0658638 2.3982e-03 0.9740383 weaklyHypermeth 2.1802e-01 1.00000 insignificant 7.1621e-04 0.98682582 weaklyHypermeth 8.9527e-02 1.00000 weaklyHypermeth 0.07435182 0.2642864 insignificant 1.00000 insignificant 0.016997 0.583898 -5.6283e-01 5 0.0097291 0.657872 -0.648143 1.0000e+00 1.4300e-26 hypomethylated 1.0000000 1.4300e-23 hypomethylated 1.00000000 7.1175e-09 hypomethylated 1.00000 3.5587e-06 hypomethylated -0.6100000 2.3996e-04 lowCoverage 0.039994 lowCoverage chr3 13530350 13531350 11120 HDAC11 ENSG00000163517 0.913512 161 5 0.807082 47 2 0.721667 81 4 0.9309055 164 5 0.936508 29 2 0.790428 199 5 0.795455 48 1 0.920971 111 5 0.840513 76 5 0.985185 51 4 0.904601 147 5 0.522222 24 1 0.618590 43 1 1.000000 6 0 0.806620 48 2 0.810667 46 4 0.265795 27 2 0.759343 172 5 0.853968 27 2 0.859328 138 5 0.840000 46 5 0.7794872 88 5 0.894123 68 3 0.919231 55 4 0.794118 20 1 0.858586 57 2 0.416667 30 2 0.561026 39 2 0.782051 43 1 0.8260102 147 5 0.753175 59 2 0.850985 79 2 0.1974704 121 5 0.109915 57 5 0.2500000 24 2 0.0000000 14 1 0.364181 64 4 0.0647059 78 2 0.878908 129 5 0.8518519 83 1 0.848485 71 2 0.86158 113 5 0.873504 124 5 0.768235 0.610070 0.628922 0.8137255 0.839402 0.775827 0.655080 0.755656 0.659477 0.937545 0.694753 0.863399 0.528406 0.721040 0.7719478 0.763922 0.367295 0.451914 0.767880 0.608156 1.000000 0.4288587 0.796785 0.831071 0.652826 0.704694 0.710784 0.785581 0.632479 0.5929066 0.6328042 0.846759 0.0068201 0.0498575 0.0784314 0.0000000 0.247982 0.0404844 0.7014666 0.6252723 0.7445039 0.528445 0.684096 1 0.766565 0.750685 -0.00064396 2 0.849074 0.839504 0.0095698 0.584537 7.0085e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.617734 6.5988e-01 lowCoverage 1 1.000000 lowCoverage 0.0292131 0.610587 lowCoverage 1 lowCoverage 0.766565 0.164804 0.6089165 4 0.849074 0.2415192 0.6075551 1.5239e-28 1.0000e+00 lowCoverage 1.6932e-26 1.0000e+00 lowCoverage 1.2545e-09 1.0000e+00 lowCoverage 1.5682e-07 1.000000 lowCoverage 0.6377894 1.5208e-06 lowCoverage 3.0417e-04 lowCoverage 0.766565 0.716763 8.2075e-03 5 0.849074 0.875551 -0.0264770 8.4693e-01 0.28069177 insignificant 1.0000e+00 1.000000 insignificant 7.7186e-01 0.36428905 insignificant 1.0000e+00 1.00000 insignificant -0.0606977 1.3394e-01 lowCoverage 1.000000 lowCoverage 0.750685 0.164804 0.634585 2 0.839504 0.2415192 0.5979853 8.7109e-18 1.0000e+00 lowCoverage 7.9190e-16 1.00000000 lowCoverage 1.8536e-07 1.0000000 lowCoverage 2.3170e-05 1 lowCoverage 0.6085762 2.4718e-06 lowCoverage 4.9436e-04 lowCoverage 0.751026 0.717308 0.0194828 2 0.866254 0.896293 -0.0300390 9.5402e-01 0.3163497 lowCoverage 1.0000e+00 1.00000 lowCoverage 9.4927e-01 0.53115102 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.08991081 0.0552351 lowCoverage 1.00000 lowCoverage 0.164804 0.716763 -6.0358e-01 4 0.2415192 0.875551 -0.634032 1.0000e+00 1.9920e-13 lowCoverage 1.0000000 4.9800e-11 lowCoverage 1.00000000 8.6151e-06 lowCoverage 1.00000 7.8319e-04 lowCoverage -0.6984871 4.4069e-05 lowCoverage 0.015149 lowCoverage chr3 14152750 14153750 11129 TMEM43 ENSG00000170876 0.948473 351 5 0.953428 153 6 0.904711 85 5 0.9594499 119 4 0.947811 87 6 0.929113 354 5 0.818925 222 6 0.903644 118 5 0.927736 52 3 0.949565 71 3 0.848861 193 6 0.809402 38 3 0.991935 62 2 0.949524 60 3 0.933115 82 3 1.000000 87 3 0.000000 1 0 0.828465 308 4 0.933052 142 5 0.948251 300 5 0.848949 64 5 0.8750000 8 0 0.961538 55 3 0.739316 69 4 0.953444 109 4 0.951685 160 6 0.992308 62 3 0.968841 53 3 0.921958 167 5 0.8500534 208 6 0.817876 215 4 0.948675 188 5 0.7947094 145 6 0.512206 112 5 0.8000000 82 3 0.7000000 28 4 0.648642 112 5 0.6074772 176 6 0.945987 295 6 0.9462780 203 6 0.736309 265 4 0.96627 290 4 0.941888 218 6 0.860956 0.991883 0.896222 0.9221020 0.834366 0.933779 0.895633 0.910453 0.937657 0.941166 0.910406 0.881643 0.968107 0.929091 0.9571560 0.989002 0.704229 0.951172 0.937681 0.912708 0.737246 0.8922155 0.963287 0.700612 0.959354 0.919306 0.975087 0.919812 0.891180 0.9147372 0.9269066 0.945706 0.5275630 0.3323882 0.7583528 0.4354466 0.491117 0.4407468 0.9379229 0.9582444 0.9264222 0.964196 0.921940 1 0.926863 0.907080 0.01725512 5 0.862743 0.855977 0.0067657 0.410103 8.5595e-01 insignificant 1 1.0000e+00 insignificant 0.774253 6.3074e-01 insignificant 1 1.000000 insignificant -0.0281971 0.595029 lowCoverage 1 lowCoverage 0.926863 0.630534 0.3018774 5 0.862743 0.7289372 0.1338058 6.1856e-17 9.7663e-01 hypermethylated 4.7581e-15 1.0000e+00 hypermethylated 1.2610e-05 9.5002e-01 hypermethylated 9.0071e-04 1.000000 hypermethylated 0.1971006 8.3434e-03 lowCoverage 3.6276e-01 lowCoverage 0.927159 0.948859 -1.3863e-02 5 0.923200 0.935667 -0.0124668 8.9992e-01 0.29989309 insignificant 1.0000e+00 1.000000 insignificant 5.3216e-01 0.62230214 insignificant 1.0000e+00 1.00000 insignificant -0.0330732 6.1339e-01 lowCoverage 1.000000 lowCoverage 0.907080 0.630534 0.285398 5 0.855977 0.7289372 0.1270401 1.5658e-08 9.3801e-01 hypermethylated 9.7864e-07 1.00000000 hypermethylated 3.4993e-04 0.9822399 hypermethylated 1.8417e-02 1 hypermethylated 0.2252976 2.5724e-03 lowCoverage 1.7354e-01 lowCoverage 0.907681 0.948859 -0.0298136 5 0.915307 0.935667 -0.0203601 9.0948e-01 0.3126008 insignificant 1.0000e+00 1.00000 insignificant 2.7287e-01 0.67071876 insignificant 1.0000e+00 1.00000 insignificant -0.00487616 0.9226956 lowCoverage 1.00000 lowCoverage 0.629403 0.948859 -3.1004e-01 5 0.6837601 0.935667 -0.251907 9.9087e-01 3.0692e-06 hypomethylated 1.0000000 2.0461e-04 hypomethylated 0.91689871 1.4901e-02 weaklyHypometh 1.00000 3.5479e-01 insignificant -0.2301738 5.1411e-03 lowCoverage 0.270586 lowCoverage chr3 14361650 14362650 11156 LSM3 ENSG00000170860 0.917824 253 8 0.885167 448 8 0.829943 137 7 0.9629808 119 3 0.798554 70 4 0.916860 243 8 0.832576 90 8 0.944096 265 8 0.873107 167 8 0.954963 181 8 0.914642 333 8 1.000000 29 3 0.950312 331 8 0.879710 83 3 0.843424 192 7 0.312500 25 0 0.797619 17 0 0.953048 265 7 0.925832 427 8 0.907498 210 8 0.960606 63 6 0.9104963 77 3 0.875819 140 8 0.719457 117 8 0.977778 61 3 0.797893 381 8 0.744380 204 8 0.656250 36 3 0.917166 386 8 0.9232267 584 8 0.909762 492 8 0.906334 348 8 0.8400468 204 8 0.728914 266 8 0.7950000 182 5 0.6113946 38 5 0.755722 150 8 0.8184502 358 8 0.787494 156 7 0.9302506 216 8 0.893197 142 3 0.70478 168 4 0.923323 137 3 0.877540 0.875611 0.743494 0.9195804 0.788571 0.897437 0.804390 0.922989 0.840739 0.918615 0.882246 1.000000 0.919087 0.867757 0.8414667 0.424716 0.831928 0.927850 0.871818 0.892676 0.911364 0.8826513 0.789764 0.897733 0.948106 0.862218 0.888399 0.876117 0.934946 0.8894690 0.8697120 0.872442 0.7529347 0.6814596 0.6601709 0.5967604 0.887950 0.8703176 0.8024616 0.8877863 0.8555601 0.744531 0.828904 3 0.882368 0.897810 -0.00992155 8 0.803644 0.890212 -0.0865688 0.878763 4.2926e-01 insignificant 1 1.0000e+00 insignificant 0.852660 4.5736e-01 insignificant 1 1.000000 insignificant 0.0117690 0.789514 insignificant 1 insignificant 0.882595 0.764854 0.1246326 8 0.904099 0.7908292 0.1132698 1.0235e-06 7.4977e-01 weaklyHypermeth 3.7906e-05 1.0000e+00 weaklyHypermeth 1.3167e-02 4.6908e-01 weaklyHypermeth 2.6872e-01 1.000000 insignificant 0.1117781 2.9577e-02 weaklyHypermeth 8.3506e-01 insignificant 0.882595 0.816626 4.6826e-02 7 0.904099 0.866229 0.0378695 2.8225e-02 0.99273000 weaklyHypermeth 1.0000e+00 1.000000 insignificant 1.6167e-01 0.98354404 insignificant 1.0000e+00 1.00000 insignificant 0.0222247 6.9232e-01 insignificant 1.000000 insignificant 0.897534 0.763773 0.131378 8 0.806191 0.6826633 0.1235278 5.7768e-04 5.6800e-01 weaklyHypermeth 1.1554e-02 1.00000000 weaklyHypermeth 5.2598e-02 0.7189832 insignificant 8.2184e-01 1 insignificant 0.1000092 4.5488e-02 weaklyHypermeth 1.0000e+00 insignificant 0.897846 0.816850 0.0570173 7 0.895768 0.881093 0.0146750 3.4935e-02 0.9899917 weaklyHypermeth 1.0000e+00 1.00000 insignificant 1.1455e-01 0.98077425 insignificant 1.0000e+00 1.00000 insignificant 0.01045571 0.8488814 insignificant 1.00000 insignificant 0.764411 0.816850 -9.4879e-02 7 0.7585148 0.881093 -0.122578 6.5460e-01 1.4602e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.83610119 4.6005e-01 insignificant 1.00000 1.0000e+00 insignificant -0.0895534 1.4513e-01 insignificant 1.000000 insignificant chr3 16073450 16074450 11222 MIR563 ENSG00000207815 0.729426 472 14 0.722104 352 15 0.668705 235 15 0.7591148 324 15 0.677361 172 14 0.745728 490 15 0.645803 281 15 0.656174 278 15 0.700078 174 10 0.612343 181 10 0.734571 419 15 0.654386 120 10 0.710571 229 14 0.689444 93 10 0.643208 229 14 0.767625 103 9 0.813444 863 9 0.798132 355 14 0.694573 286 14 0.742357 406 15 0.607572 119 11 0.8018429 116 11 0.774036 240 15 0.853523 106 8 0.733683 174 15 0.752986 376 15 0.739510 119 10 0.714920 91 7 0.745960 154 11 0.7363551 286 15 0.755727 366 15 0.760783 524 15 0.6019986 273 15 0.656626 192 15 0.6559838 316 15 0.5734623 116 10 0.592438 163 16 0.6867925 325 15 0.753029 571 15 0.7943730 523 15 0.793033 502 15 0.80184 381 11 0.776577 460 15 0.810030 0.721623 0.670876 0.7887725 0.691355 0.802514 0.758350 0.745270 0.755770 0.698168 0.805373 0.745519 0.791897 0.758864 0.6801048 0.781709 0.782697 0.825608 0.751556 0.789744 0.639297 0.7969692 0.780975 0.825061 0.818612 0.796242 0.731381 0.729468 0.737341 0.7420154 0.7681530 0.786036 0.6084776 0.6267587 0.6805104 0.6635622 0.651437 0.7432861 0.8142779 0.7989483 0.8007496 0.820038 0.791272 7 0.760640 0.769375 -0.00355531 15 0.715419 0.728164 -0.0127451 0.818376 5.2472e-02 insignificant 1 1.0000e+00 insignificant 0.814323 1.7297e-02 weaklyHypometh 1 1.000000 insignificant -0.0398176 0.064704 insignificant 1 insignificant 0.760528 0.677978 0.0846842 15 0.706561 0.6422712 0.0642896 4.6487e-08 9.9987e-01 weaklyHypermeth 2.0212e-06 1.0000e+00 weaklyHypermeth 1.5728e-04 9.9829e-01 weaklyHypermeth 8.2781e-03 1.000000 weaklyHypermeth 0.0803738 4.3903e-03 weaklyHypermeth 2.1951e-01 insignificant 0.760528 0.798523 -3.8101e-02 15 0.706561 0.768710 -0.0621492 9.9992e-01 0.01115962 weaklyHypometh 1.0000e+00 0.940404 insignificant 9.9985e-01 0.01245253 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.0755132 6.5648e-05 weaklyHypometh 0.021883 weaklyHypometh 0.769490 0.677978 0.089636 15 0.732007 0.6422712 0.0897360 4.8271e-07 1.0000e+00 weaklyHypermeth 2.1941e-05 1.00000000 weaklyHypermeth 1.7509e-05 0.9999845 weaklyHypermeth 1.3468e-03 1 weaklyHypermeth 0.1201914 3.2038e-04 weaklyHypermeth 3.2038e-02 weaklyHypermeth 0.769490 0.798523 -0.0340605 15 0.732007 0.768710 -0.0367028 9.9273e-01 0.0733686 insignificant 1.0000e+00 1.00000 insignificant 9.6450e-01 0.05913032 insignificant 1.0000e+00 1.00000 insignificant -0.03569566 0.0760569 insignificant 1.00000 insignificant 0.677978 0.798523 -1.2122e-01 15 0.6422712 0.768710 -0.126439 1.0000e+00 2.8663e-08 weaklyHypometh 1.0000000 2.2048e-06 weaklyHypometh 1.00000000 4.4046e-08 weaklyHypometh 1.00000 1.1011e-05 weaklyHypometh -0.1558870 1.0800e-04 weaklyHypometh 0.021601 weaklyHypometh chr3 23964050 23965050 11401 NR1D2 ENSG00000174738 0.831419 167 7 0.794805 70 6 0.621275 73 6 0.7467104 191 7 0.882143 41 4 0.778656 269 7 0.696559 62 4 0.879670 75 4 0.713313 44 4 0.793773 65 5 0.800105 102 7 0.563492 29 3 0.827354 91 5 NA 0 0 0.975694 47 3 0.611905 19 2 0.710173 52 4 0.727542 222 7 0.870153 101 6 0.781914 301 7 0.863520 55 6 0.8144048 114 5 0.848644 128 6 0.708617 53 5 0.696279 74 5 0.757412 111 6 0.719643 80 6 0.900000 48 4 0.759127 73 7 0.7626875 130 7 0.849192 149 7 0.783296 368 7 0.7539322 81 7 0.741466 68 6 0.7250309 101 4 0.7833333 37 4 0.666667 33 4 0.7839439 146 7 0.813978 139 5 0.7581549 140 7 0.784551 184 7 0.82653 91 7 0.781744 184 7 0.878346 0.831906 0.677792 0.8070689 0.868262 0.775451 0.772189 0.820240 0.745704 0.864721 0.814647 0.714736 0.809562 NA 0.9618794 0.677725 0.822115 0.760392 0.865058 0.844838 0.893490 0.8252128 0.869246 0.770235 0.755245 0.809692 0.842494 0.957447 0.795311 0.8120948 0.8674867 0.828608 0.8312379 0.7984066 0.8199242 0.8191489 0.768322 0.8405547 0.8476497 0.8165274 0.7467963 0.844140 0.826092 3 0.795646 0.820680 -0.01942661 7 0.774469 0.784310 -0.0098407 0.805299 8.9098e-02 insignificant 1 1.0000e+00 insignificant 0.441236 5.8436e-02 insignificant 1 1.000000 insignificant -0.0197970 0.519608 lowCoverage 1 lowCoverage 0.795646 0.740343 0.0230361 6 0.774469 0.7500430 0.0244263 9.3919e-02 4.1225e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.0331e-01 3.0472e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0263759 3.8331e-01 lowCoverage 1.0000e+00 lowCoverage 0.795646 0.841463 -1.8945e-02 7 0.774469 0.796431 -0.0219617 9.4911e-01 0.38816326 insignificant 1.0000e+00 1.000000 insignificant 7.8396e-01 0.73888457 insignificant 1.0000e+00 1.00000 insignificant -0.0242203 3.7196e-01 lowCoverage 1.000000 lowCoverage 0.820680 0.740343 0.039040 6 0.784310 0.7500430 0.0342669 2.1976e-02 6.9946e-01 weaklyHypermeth 3.2317e-01 1.00000000 insignificant 7.4964e-02 0.7729336 insignificant 1.0000e+00 1 insignificant 0.0461730 9.8679e-02 insignificant 1.0000e+00 insignificant 0.820680 0.841463 0.0020505 7 0.784310 0.796431 -0.0121211 3.7682e-01 0.5105826 insignificant 1.0000e+00 1.00000 insignificant 3.2148e-01 0.70287317 insignificant 1.0000e+00 1.00000 insignificant -0.00442331 0.8479143 insignificant 1.00000 insignificant 0.740343 0.841463 -5.7204e-02 6 0.7500430 0.796431 -0.046388 7.6150e-01 1.1073e-02 weaklyHypometh 1.0000000 1.9245e-01 insignificant 0.48403065 1.6555e-01 insignificant 1.00000 1.0000e+00 insignificant -0.0505963 4.5842e-02 weaklyHypometh 1.000000 insignificant chr3 24270250 24271250 11418 THRB ENSG00000151090 0.692857 38 2 0.609474 54 5 0.642857 27 3 0.8000000 36 5 0.608528 64 5 0.708333 14 2 0.527778 43 2 0.857692 45 4 0.800000 15 1 0.850000 35 4 0.764000 97 5 0.416667 7 1 0.708571 78 5 0.950000 18 1 0.722778 38 5 0.742857 16 1 0.866667 18 1 0.628819 65 5 0.766667 22 3 0.750000 9 1 0.833333 21 2 0.6250000 13 0 0.773077 46 2 0.687500 22 1 0.760294 34 4 0.595844 58 5 0.833333 17 1 1.000000 11 1 0.888333 36 5 0.9019048 50 4 0.703776 45 5 0.733333 11 2 0.6333333 50 5 0.737143 31 4 0.7878788 39 3 1.0000000 2 0 0.686667 57 5 0.8166667 45 4 0.658333 44 2 0.8714286 52 5 0.716807 56 5 0.81667 24 1 0.805000 50 5 0.886555 0.648297 0.827731 0.8352941 0.798727 0.721071 0.660131 0.981900 0.960784 0.889706 0.836471 0.578914 0.802521 0.911765 0.8031046 0.915966 0.805086 0.759053 0.990196 0.833816 0.745098 0.5952475 0.832956 0.889706 0.841557 0.512605 0.863933 1.000000 0.888725 0.9915966 0.7262032 0.754101 0.6158645 0.6789916 0.7629234 0.8745811 0.700980 0.9803922 0.7475490 0.8921569 0.7770638 0.926471 0.823529 0 0.736771 0.793956 -0.04483751 4 0.795540 0.696978 0.0985618 0.977595 1.4716e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.715563 3.1123e-01 lowCoverage 1 1.000000 lowCoverage -0.0572502 0.208277 lowCoverage 1 lowCoverage 0.735695 0.736607 0.0239795 4 0.713756 0.7077124 0.0060436 4.9758e-02 6.3425e-01 lowCoverage 6.2985e-01 1.0000e+00 lowCoverage 3.8019e-01 6.9935e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage -0.0562208 3.7006e-01 lowCoverage 1.0000e+00 lowCoverage 0.735695 0.796460 -6.3364e-02 5 0.713756 0.784821 -0.0710654 9.5772e-01 0.00735394 weaklyHypometh 1.0000e+00 0.735394 insignificant 7.3672e-01 0.10304580 insignificant 1.0000e+00 1.00000 insignificant -0.0529198 2.9150e-01 lowCoverage 1.000000 lowCoverage 0.795580 0.736607 0.067399 4 0.775770 0.7077124 0.0680571 6.4553e-02 9.8298e-01 lowCoverage 7.7986e-01 1.00000000 lowCoverage 2.1112e-01 0.9850020 lowCoverage 1.0000e+00 1 lowCoverage 0.0010294 9.8720e-01 lowCoverage 1.0000e+00 lowCoverage 0.795580 0.796460 -0.0235507 4 0.775770 0.784821 -0.0090519 6.4709e-01 0.1015989 lowCoverage 1.0000e+00 1.00000 lowCoverage 3.7785e-01 0.13295230 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.00433040 0.9342107 lowCoverage 1.00000 lowCoverage 0.736607 0.796460 -9.9929e-02 4 0.7077124 0.784821 -0.077109 8.9494e-01 8.5585e-04 lowCoverage 1.0000000 2.4269e-02 lowCoverage 0.65180186 2.0099e-02 lowCoverage 1.00000 4.3693e-01 lowCoverage 0.0033010 9.6041e-01 lowCoverage 1.000000 lowCoverage chr3 25914550 25915550 11485 OXSM ENSG00000151093 0.595474 309 9 0.732234 89 9 0.875000 48 5 0.8485440 309 13 0.721088 74 9 0.873255 292 9 0.563657 57 4 0.797161 119 9 0.771429 66 8 0.868437 86 9 0.784732 281 9 0.480000 34 5 0.788889 123 9 0.799211 77 4 0.892361 108 9 0.909091 41 4 1.000000 5 0 0.797969 569 14 0.804972 158 4 0.788497 199 4 0.827576 72 9 0.8777778 62 9 0.703016 197 9 0.803333 49 8 0.751659 88 5 0.794012 212 9 0.841065 162 9 0.809524 27 4 0.829695 208 9 0.8356917 199 9 0.847059 134 9 0.864652 241 9 0.7417971 187 11 0.834440 245 9 0.6007793 118 9 NA 0 0 0.681692 78 8 0.7845198 312 9 0.743478 247 12 0.9060005 320 9 0.832415 312 9 0.81654 317 5 0.739025 286 12 0.884548 0.799196 0.916385 0.9402074 0.812259 0.895450 0.814846 0.904743 0.891892 0.887307 0.816190 0.282432 0.872973 0.958628 0.9140860 0.861270 NA 0.893581 0.932797 0.886173 0.946171 0.9684685 0.824451 0.820045 0.883258 0.884209 0.883947 0.916582 0.865945 0.8677995 0.9049826 0.890896 0.8427459 0.8023096 0.8108969 NA 0.744052 0.8911513 0.8411169 0.9464136 0.9019698 0.925885 0.877202 1 0.877464 0.873939 0.00553754 9 0.762776 0.757265 0.0055112 0.721841 4.9662e-01 insignificant 1 1.0000e+00 insignificant 0.937551 4.3706e-01 insignificant 1 1.000000 insignificant -0.0308217 0.326194 insignificant 1 insignificant 0.877672 0.824468 0.0529664 9 0.769641 0.7080472 0.0615936 5.8002e-03 9.9164e-01 weaklyHypermeth 8.7882e-02 1.0000e+00 weaklyHypermeth 1.1587e-02 9.9968e-01 weaklyHypermeth 2.5076e-01 1.000000 insignificant 0.0559545 2.8638e-01 insignificant 1.0000e+00 insignificant 0.877464 0.891290 -1.1257e-02 9 0.762776 0.802101 -0.0393252 7.6381e-01 0.32123948 insignificant 1.0000e+00 1.000000 insignificant 6.0247e-01 0.69207183 insignificant 1.0000e+00 1.00000 insignificant -0.0228909 5.9092e-01 insignificant 1.000000 insignificant 0.874393 0.824468 0.044237 9 0.775641 0.7080472 0.0675936 9.3400e-04 9.9572e-01 weaklyHypermeth 1.7962e-02 1.00000000 weaklyHypermeth 9.5725e-04 0.9999970 weaklyHypermeth 3.8290e-02 1 weaklyHypermeth 0.0867762 9.9800e-02 insignificant 1.0000e+00 insignificant 0.873410 0.890688 -0.0214317 9 0.709936 0.751970 -0.0420341 4.6868e-01 0.5367356 insignificant 1.0000e+00 1.00000 insignificant 5.6993e-01 0.95404732 insignificant 1.0000e+00 1.00000 insignificant 0.00793077 0.8237568 insignificant 1.00000 insignificant 0.824468 0.891216 -6.6695e-02 9 0.7080472 0.787965 -0.079918 9.9795e-01 5.4360e-03 weaklyHypometh 1.0000000 1.0454e-01 insignificant 0.99997742 2.8762e-02 weaklyHypometh 1.00000 5.3499e-01 insignificant -0.0788454 1.6408e-01 insignificant 1.000000 insignificant chr3 27210050 27211050 11491 ENSG00000221438 0.736288 201 9 0.716388 133 9 0.624281 120 9 0.7727898 182 9 0.680258 42 5 0.794221 250 9 0.729788 119 6 0.638545 111 8 0.682525 71 6 0.749380 64 6 0.727696 273 9 0.594832 59 5 0.772723 72 6 0.670909 53 5 0.727972 99 6 0.609188 68 5 0.512188 38 4 0.765570 214 9 0.721120 162 9 0.816896 233 9 0.792877 67 7 0.8335638 75 6 0.751700 114 6 0.619048 38 3 0.875463 89 7 0.634613 132 9 0.777357 96 7 0.550000 37 2 0.541132 82 6 0.6929996 124 8 0.737915 105 9 0.724646 283 9 0.6454687 107 8 0.605556 103 9 0.5670465 179 8 0.7178571 58 5 0.660675 100 9 0.6748412 156 9 0.754298 251 9 0.7767756 293 9 0.658939 189 9 0.77622 177 6 0.777306 287 9 0.791505 0.793368 0.728594 0.8643103 0.733779 0.849032 0.780251 0.708736 0.705331 0.830843 0.797472 0.755286 0.840134 0.813819 0.7982025 0.733333 0.711742 0.772625 0.796320 0.842693 0.824858 0.8466210 0.827720 0.758627 0.924861 0.698992 0.842835 0.761111 0.635529 0.7758934 0.8097330 0.768586 0.7306810 0.6681481 0.6626326 0.8053704 0.715239 0.7648931 0.8360386 0.8457866 0.7411932 0.838844 0.831360 2 0.767551 0.763285 0.00911119 9 0.727294 0.752421 -0.0251275 0.502039 7.4536e-01 insignificant 1 1.0000e+00 insignificant 0.937168 4.8477e-01 insignificant 1 1.000000 insignificant -0.0087648 0.806068 insignificant 1 insignificant 0.767551 0.662873 0.0962011 9 0.727294 0.6639510 0.0633430 2.1412e-06 9.9906e-01 weaklyHypermeth 7.1373e-05 1.0000e+00 weaklyHypermeth 6.3746e-03 9.9791e-01 weaklyHypermeth 1.6775e-01 1.000000 insignificant 0.0569374 6.1194e-02 insignificant 1.0000e+00 insignificant 0.767669 0.798663 -2.6045e-02 9 0.734030 0.755546 -0.0215156 8.7363e-01 0.02528594 weaklyHypometh 1.0000e+00 1.000000 insignificant 8.6626e-01 0.01957666 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.0465294 1.3663e-01 insignificant 1.000000 insignificant 0.763285 0.662873 0.086515 9 0.752421 0.6639510 0.0884704 1.4804e-03 9.9996e-01 weaklyHypermeth 2.6435e-02 1.00000000 weaklyHypermeth 1.0707e-02 0.9999320 weaklyHypermeth 2.2570e-01 1 insignificant 0.0657022 1.0014e-01 insignificant 1.0000e+00 insignificant 0.762903 0.798663 -0.0360170 9 0.724913 0.755546 -0.0306333 8.4758e-01 0.0732414 insignificant 1.0000e+00 1.00000 insignificant 7.2355e-01 0.37781050 insignificant 1.0000e+00 1.00000 insignificant -0.03776453 0.3409699 insignificant 1.00000 insignificant 0.661912 0.798663 -1.2423e-01 9 0.6266122 0.755546 -0.128934 9.9963e-01 7.8789e-06 weaklyHypometh 1.0000000 4.3772e-04 weaklyHypometh 0.99719983 2.4312e-04 weaklyHypometh 1.00000 1.4393e-02 weaklyHypometh -0.1034667 9.8018e-03 weaklyHypometh 0.376788 insignificant chr3 27649050 27650050 11513 ENSG00000201033 0.118396 755 23 0.089032 344 20 0.037242 383 22 0.1929875 686 23 0.100973 329 17 0.491633 177 14 0.093637 533 22 0.154199 379 19 0.164776 277 20 0.062945 519 19 0.165533 370 22 0.123005 501 22 0.039066 531 22 0.030516 135 13 0.032133 730 22 0.011332 548 22 0.025701 248 15 0.526404 339 22 0.570576 236 17 0.194417 319 22 0.024026 132 11 0.0580668 356 17 0.055855 477 22 0.092864 207 15 0.308593 212 18 0.464314 270 13 0.335588 112 11 0.088473 206 15 0.299428 275 16 0.0097403 554 23 0.050033 463 22 0.143583 384 23 0.1508686 320 21 0.012963 252 21 0.0434783 709 19 0.0040486 255 17 0.032850 231 9 0.1806331 470 22 0.039909 1210 23 0.1968239 742 23 0.122120 673 23 0.18241 533 22 0.423437 400 12 0.154984 0.080632 0.051866 0.2354646 0.066756 0.640352 0.083333 0.064331 0.116484 0.091880 0.165973 0.072458 0.053654 0.114671 0.0428409 0.027109 0.037571 0.502394 0.634780 0.210158 0.086301 0.0189686 0.078860 0.109995 0.198810 0.643038 0.415249 0.081762 0.413365 0.0047571 0.0153149 0.300168 0.0199165 0.0027353 0.0000000 0.0026672 0.048319 0.1881018 0.0393140 0.1583899 0.1276599 0.240281 0.784200 10 0.130764 0.159989 -0.01590465 22 0.217614 0.184233 0.0333810 0.438047 8.9385e-01 insignificant 1 1.0000e+00 insignificant 0.198924 9.9978e-01 insignificant 1 1.000000 insignificant 0.0003448 0.995271 insignificant 1 insignificant 0.130675 0.053196 0.0783707 22 0.195926 0.1215608 0.0743649 8.9801e-04 9.6465e-01 weaklyHypermeth 1.6327e-02 1.0000e+00 weaklyHypermeth 2.1568e-06 1.0000e+00 weaklyHypermeth 1.6590e-04 1.000000 weaklyHypermeth 0.0904182 7.8830e-02 insignificant 1.0000e+00 insignificant 0.129692 0.185863 -3.0846e-02 23 0.201928 0.169934 0.0319942 9.9092e-01 0.45113630 insignificant 1.0000e+00 1.000000 insignificant 1.0000e+00 0.00201511 weaklyHypometh 1.0000e+00 0.40302 insignificant -0.0317149 6.8197e-01 insignificant 1.000000 insignificant 0.160121 0.053220 0.103089 22 0.195748 0.1253596 0.0703881 3.0653e-02 9.9813e-01 weaklyHypermeth 4.2573e-01 1.00000000 insignificant 2.3166e-02 0.9999958 weaklyHypermeth 4.3710e-01 1 insignificant 0.0900735 1.1024e-01 insignificant 1.0000e+00 insignificant 0.160033 0.185529 -0.0206805 22 0.178969 0.136507 0.0424623 9.9845e-01 0.3888829 insignificant 1.0000e+00 1.00000 insignificant 1.0000e+00 0.00058088 weaklyHypometh 1.0000e+00 0.53925 insignificant -0.03205967 0.6892485 insignificant 1.00000 insignificant 0.053034 0.186020 -1.1172e-01 22 0.0971453 0.186379 -0.089233 9.8925e-01 4.0624e-03 weaklyHypometh 1.0000000 7.9655e-02 weaklyHypometh 1.00000000 1.3456e-09 weaklyHypometh 1.00000 1.3456e-06 weaklyHypometh -0.1221331 1.3744e-01 insignificant 1.000000 insignificant chr3 32890250 32891250 11629 TRIM71 ENSG00000206557 0.845631 101 8 0.674105 96 5 0.666667 68 5 0.6987654 75 7 0.578339 83 8 0.857410 107 5 0.721786 93 8 0.923865 78 8 0.579968 62 5 0.758974 62 6 0.621017 189 8 0.770555 92 6 0.702682 111 7 0.794839 84 7 0.801709 113 8 0.725744 56 7 0.714536 615 7 0.775207 147 11 0.763492 69 5 0.695391 87 5 0.855372 25 1 0.8285714 19 3 0.677261 82 8 0.742593 39 5 0.846154 50 3 0.636905 106 5 0.798469 39 4 0.895089 33 4 0.828216 134 8 0.6714015 73 5 0.863975 90 5 0.792956 107 5 0.5644921 114 7 0.671474 77 8 0.5595875 117 5 0.7388889 18 1 0.688889 66 5 0.7634524 99 5 0.606326 98 8 0.7778770 64 8 0.685417 65 4 0.86250 58 4 0.711905 72 6 0.770619 0.704804 0.622619 0.6105159 0.533829 0.758535 0.724011 0.875216 0.568624 0.802026 0.616011 0.739890 0.720372 0.780016 0.7825194 0.650067 0.686205 0.835848 0.689062 0.680894 0.879464 0.8594272 0.699002 0.731399 0.780220 0.727622 0.759829 0.826690 0.790689 0.6708469 0.7759598 0.718374 0.5593063 0.5916323 0.6409746 0.6291720 0.674368 0.7219919 0.6991437 0.7777069 0.7193452 0.790445 0.781335 1 0.711055 0.728984 -0.03530207 5 0.700008 0.729342 -0.0293343 0.982447 3.5859e-04 weaklyHypometh 1 1.7929e-01 insignificant 0.983397 1.7788e-05 weaklyHypometh 1 0.017788 weaklyHypometh -0.0528795 0.106486 lowCoverage 1 lowCoverage 0.712185 0.625255 0.0650526 5 0.732509 0.6790490 0.0534600 4.5002e-04 8.8680e-01 weaklyHypermeth 8.9753e-03 1.0000e+00 weaklyHypermeth 5.2914e-02 9.9206e-01 insignificant 8.8190e-01 1.000000 insignificant 0.0690701 1.2300e-01 insignificant 1.0000e+00 insignificant 0.712185 0.753501 -2.7631e-02 8 0.732509 0.664810 0.0676994 1.7824e-01 0.26325176 insignificant 1.0000e+00 1.000000 insignificant 5.3157e-01 0.39034345 insignificant 1.0000e+00 1.00000 insignificant 0.0047291 9.2421e-01 insignificant 1.000000 insignificant 0.729899 0.625255 0.101128 5 0.802277 0.6790490 0.1232278 5.6449e-05 9.9962e-01 weaklyHypermeth 1.4112e-03 1.00000000 weaklyHypermeth 3.8512e-05 0.9998421 weaklyHypermeth 2.4070e-03 1 weaklyHypermeth 0.1219496 1.7330e-02 lowCoverage 5.9759e-01 lowCoverage 0.729899 0.753501 0.0127567 5 0.802277 0.664810 0.1374672 3.4172e-01 0.8492006 insignificant 1.0000e+00 1.00000 insignificant 1.7881e-02 0.94245381 weaklyHypermeth 1.0000e+00 1.00000 insignificant 0.05760863 0.2861716 lowCoverage 1.00000 lowCoverage 0.625255 0.753501 -9.7652e-02 5 0.6790490 0.664810 0.014239 9.3540e-01 2.5749e-02 weaklyHypometh 1.0000000 3.5923e-01 insignificant 0.94290277 1.2667e-01 insignificant 1.00000 1.0000e+00 insignificant -0.0643410 2.8090e-01 insignificant 1.000000 insignificant chr3 33761250 33762250 11656 CLASP2 ENSG00000163539 0.787489 679 19 0.644731 491 19 0.679533 360 19 0.7980399 386 19 0.782193 247 16 0.770308 848 19 0.670613 349 19 0.718193 400 19 0.669776 293 19 0.788160 343 19 0.774485 671 19 0.848497 213 14 0.692494 373 18 0.666667 47 6 0.749421 370 16 0.699593 156 11 0.584465 265 14 0.800316 440 19 0.718222 454 19 0.728594 750 19 0.761582 158 13 0.7725809 266 18 0.686896 422 19 0.709512 252 19 0.809772 182 18 0.759756 599 19 0.689872 328 19 0.746143 134 12 0.795516 447 19 0.7576602 536 19 0.790619 606 19 0.754982 1027 19 0.6734520 539 19 0.644583 429 19 0.6721308 514 19 0.7291946 163 11 0.681116 263 18 0.6968124 590 19 0.772660 600 19 0.7508627 664 19 0.801827 523 19 0.75542 452 18 0.748014 560 18 0.808479 0.689747 0.709360 0.8281646 0.831355 0.806419 0.679167 0.784957 0.712465 0.815671 0.794555 0.826994 0.725807 0.747181 0.8105825 0.681459 0.662807 0.840349 0.775672 0.761340 0.783150 0.7971229 0.722084 0.713992 0.851992 0.802160 0.747673 0.775389 0.820250 0.7875960 0.8323463 0.771484 0.6975952 0.6733461 0.7386471 0.7347274 0.719385 0.7127614 0.8154785 0.8165588 0.8306189 0.835363 0.837864 13 0.758676 0.765987 -0.01024363 19 0.744370 0.769115 -0.0247450 0.646889 7.6068e-02 insignificant 1 1.0000e+00 insignificant 0.919183 4.0643e-02 weaklyHypometh 1 1.000000 insignificant -0.0243180 0.200985 insignificant 1 insignificant 0.758740 0.700961 0.0560383 19 0.753894 0.6726110 0.0812832 1.3772e-06 9.9867e-01 weaklyHypermeth 4.9186e-05 1.0000e+00 weaklyHypermeth 5.8552e-04 9.9794e-01 weaklyHypermeth 2.3421e-02 1.000000 weaklyHypermeth 0.0457081 2.3646e-02 weaklyHypermeth 7.1653e-01 insignificant 0.758884 0.813148 -4.3307e-02 19 0.766599 0.729093 0.0375063 9.9878e-01 0.00078092 weaklyHypometh 1.0000e+00 0.218444 insignificant 9.9946e-01 0.00145124 weaklyHypometh 1.0000e+00 0.40302 insignificant -0.0371667 4.9007e-02 weaklyHypometh 1.000000 insignificant 0.765893 0.701522 0.064540 19 0.757571 0.7062415 0.0513295 2.7028e-08 9.9872e-01 weaklyHypermeth 1.5899e-06 1.00000000 weaklyHypermeth 3.0352e-05 0.9999646 weaklyHypermeth 2.0235e-03 1 weaklyHypermeth 0.0700261 7.6998e-04 weaklyHypermeth 6.9999e-02 weaklyHypermeth 0.765987 0.813371 -0.0372893 19 0.769115 0.750911 0.0182043 9.9844e-01 0.0039522 weaklyHypometh 1.0000e+00 0.77620 insignificant 9.5285e-01 0.00592387 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.01284869 0.4124442 insignificant 1.00000 insignificant 0.700961 0.813014 -9.7932e-02 19 0.6726110 0.703292 -0.030681 9.9994e-01 6.8160e-11 weaklyHypometh 1.0000000 6.8160e-09 weaklyHypometh 0.99988114 1.1407e-06 weaklyHypometh 1.00000 1.9012e-04 weaklyHypometh -0.0828748 4.2106e-04 weaklyHypometh 0.052633 weaklyHypometh chr3 33821650 33822650 11659 PDCD6IP ENSG00000170248 0.874454 186 5 0.791255 74 3 0.847953 64 3 0.9345238 93 5 0.716667 18 1 0.744981 191 4 0.873225 55 3 0.732637 50 3 0.843750 67 4 0.730072 59 3 0.792695 140 5 0.789167 46 4 0.833036 100 4 0.888889 9 1 0.912283 72 3 0.767857 34 5 0.847273 26 2 0.811928 127 5 0.895298 78 3 0.832314 154 4 0.817143 34 5 0.8169697 39 3 0.849474 94 5 0.960784 28 3 0.800000 33 3 0.896703 65 4 0.580000 37 3 0.863235 57 4 0.878110 91 4 0.8590996 96 4 0.874223 67 3 0.667994 171 4 0.5546651 69 3 0.537340 46 3 0.7812500 78 4 0.8303030 35 4 0.722527 58 3 0.8213863 83 4 0.827415 158 5 0.8686053 177 5 0.833514 70 5 0.91663 171 5 0.920301 158 5 0.832974 0.739961 0.765357 0.9050253 0.747493 0.821932 0.852034 0.725299 0.813053 0.746265 0.734862 0.734403 0.816490 0.790146 0.8975491 0.681574 0.790507 0.814131 0.847838 0.808517 0.804046 0.7324216 0.805170 0.952476 0.711898 0.849460 0.692035 0.873699 0.824162 0.7919802 0.8550962 0.821649 0.6031616 0.5874348 0.6728429 0.7447037 0.641350 0.7507267 0.7591805 0.8357738 0.7912607 0.900461 0.888504 3 0.826537 0.837438 -0.01003936 4 0.843812 0.849278 -0.0054666 0.747202 2.4468e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.643248 2.2379e-01 lowCoverage 1 1.000000 lowCoverage 0.0010348 0.975413 lowCoverage 1 lowCoverage 0.826537 0.704607 0.1246968 4 0.843812 0.7566072 0.0872046 5.0243e-06 8.7009e-01 lowCoverage 1.6208e-04 1.0000e+00 lowCoverage 1.1688e-03 9.3979e-01 lowCoverage 4.0303e-02 1.000000 lowCoverage 0.1151009 8.5305e-02 lowCoverage 1.0000e+00 lowCoverage 0.826537 0.899183 -3.2863e-02 5 0.843812 0.878649 -0.0348375 9.8447e-01 0.06862048 insignificant 1.0000e+00 1.000000 insignificant 8.1843e-01 0.25245763 insignificant 1.0000e+00 1.00000 insignificant -0.0502800 6.9870e-02 lowCoverage 1.000000 lowCoverage 0.837438 0.704607 0.134702 4 0.849278 0.7566072 0.0926712 3.7405e-05 9.6486e-01 lowCoverage 1.0390e-03 1.00000000 lowCoverage 1.3280e-03 0.8900369 lowCoverage 4.7429e-02 1 lowCoverage 0.1140661 9.8773e-02 lowCoverage 1.0000e+00 lowCoverage 0.837438 0.899183 -0.0233029 4 0.849278 0.878649 -0.0293710 9.3812e-01 0.1919444 lowCoverage 1.0000e+00 1.00000 lowCoverage 3.9110e-01 0.33099790 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.05131477 0.1719939 lowCoverage 1.00000 lowCoverage 0.704607 0.899183 -1.5814e-01 4 0.7566072 0.878649 -0.122042 7.8458e-01 2.6389e-04 lowCoverage 1.0000000 9.7737e-03 lowCoverage 0.88154594 6.8126e-04 lowCoverage 1.00000 3.7848e-02 lowCoverage -0.1653808 2.5911e-02 lowCoverage 0.785181 lowCoverage chr3 34026550 34027550 11672 PDCD6IP ENSG00000170248 0.802000 192 6 0.631818 151 6 0.778870 105 6 0.7975143 143 6 0.815212 67 6 0.762665 216 6 0.637007 87 6 0.686874 133 6 0.595794 76 5 0.621257 79 5 0.685086 211 6 0.870000 65 3 0.750371 108 6 0.800000 24 4 0.828571 81 6 0.600000 60 6 0.698214 50 3 0.715231 171 6 0.742917 125 6 0.739714 220 6 0.717647 35 3 0.7967836 46 3 0.679861 92 6 0.794486 43 2 0.838889 38 3 0.779786 191 6 0.984375 45 3 0.880342 39 3 0.726707 89 6 0.7725454 190 6 0.787776 211 6 0.682553 255 6 0.6275529 124 6 0.490176 102 6 0.7801894 130 6 0.8766885 46 3 0.657260 96 6 0.7250394 169 6 0.598373 184 6 0.7775002 173 6 0.732524 146 6 0.83472 163 5 0.812211 176 6 0.916073 0.785878 0.770410 0.8549958 0.911115 0.857370 0.737818 0.759623 0.668745 0.836381 0.858411 0.817692 0.800354 0.868631 0.8571429 0.764835 0.736699 0.841071 0.771899 0.828712 0.897544 0.9346925 0.837271 0.878085 0.899234 0.866221 0.954139 0.846016 0.830887 0.8343516 0.9038529 0.794292 0.7598731 0.7320951 0.8607871 0.8354129 0.775599 0.7306407 0.8798903 0.8756331 0.8824392 0.916851 0.874755 3 0.769036 0.804553 -0.03105196 6 0.722242 0.757404 -0.0351620 0.890399 7.3765e-02 insignificant 1 1.0000e+00 insignificant 0.848041 9.9017e-03 weaklyHypometh 1 1.000000 insignificant -0.0588569 0.068948 lowCoverage 1 lowCoverage 0.769818 0.715142 0.0626722 6 0.768277 0.7138807 0.0543963 6.6493e-04 9.8296e-01 weaklyHypermeth 1.2314e-02 1.0000e+00 weaklyHypermeth 2.8989e-03 9.6328e-01 weaklyHypermeth 8.2827e-02 1.000000 weaklyHypermeth 0.0351382 5.6259e-01 insignificant 1.0000e+00 insignificant 0.769036 0.828979 -5.8492e-02 6 0.722242 0.591029 0.1312132 9.8705e-01 0.01227447 weaklyHypometh 1.0000e+00 0.944190 insignificant 8.1351e-01 0.01814918 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.0231099 6.3204e-01 insignificant 1.000000 insignificant 0.804399 0.715142 0.090808 6 0.722748 0.7138807 0.0088672 4.0145e-05 9.9523e-01 weaklyHypermeth 1.0850e-03 1.00000000 weaklyHypermeth 5.8513e-04 0.9991309 weaklyHypermeth 2.6597e-02 1 weaklyHypermeth 0.0939950 1.5961e-01 lowCoverage 1.0000e+00 lowCoverage 0.804553 0.828979 -0.0269907 6 0.757404 0.591029 0.1663753 9.8343e-01 0.2656449 insignificant 1.0000e+00 1.00000 insignificant 8.7575e-01 0.66365412 insignificant 1.0000e+00 1.00000 insignificant 0.03574696 0.4869015 lowCoverage 1.00000 lowCoverage 0.715142 0.829964 -1.1952e-01 6 0.7138807 0.675462 0.038419 1.0000e+00 1.3216e-04 weaklyHypometh 1.0000000 5.5917e-03 weaklyHypometh 0.99993778 9.0144e-05 weaklyHypometh 1.00000 6.0096e-03 weaklyHypometh -0.0582481 4.1914e-01 insignificant 1.000000 insignificant chr3 35680450 35681450 11686 ENSG00000172995 0.647292 246 5 0.391303 102 5 0.553160 109 5 0.7823529 212 5 0.286833 72 5 0.800771 173 5 0.506630 159 5 0.652664 113 5 0.570419 118 5 0.701671 98 5 0.715182 129 5 0.597500 79 5 0.341439 123 5 NA 0 0 0.540606 94 5 0.561905 23 2 0.509206 56 5 0.424746 219 5 0.771956 75 5 0.580362 228 5 0.521270 63 4 0.4846154 113 5 0.770931 117 5 0.633298 53 3 0.559722 66 5 0.622049 162 5 0.505342 53 5 0.441399 60 5 0.649451 66 5 0.4526367 186 5 0.668188 197 5 0.454901 241 5 0.1013089 147 5 0.070833 79 5 0.0078125 128 2 0.0848485 39 3 0.221734 50 5 0.0905637 122 5 0.553272 252 5 0.5081091 194 5 0.535819 203 5 0.76866 182 5 0.329476 225 5 0.659928 0.389338 0.560791 0.7936988 0.295788 0.807209 0.515078 0.657860 0.570195 0.685014 0.716091 0.599595 0.338850 NA 0.5483840 0.533518 0.516782 0.425248 0.782308 0.588780 0.541293 0.4834142 0.785643 0.645587 0.561084 0.620340 0.509149 0.452312 0.661741 0.4590411 0.6729113 0.462039 0.0966381 0.0691748 0.0941232 0.0943660 0.227189 0.0941248 0.5483921 0.5024161 0.5546802 0.760950 0.324634 5 0.585255 0.558460 0.02505789 5 0.588395 0.566990 0.0214058 0.314716 8.0727e-01 insignificant 1 1.0000e+00 insignificant 0.417278 7.8726e-01 insignificant 1 1.000000 insignificant 0.0119287 0.793374 lowCoverage 1 lowCoverage 0.585255 0.083186 0.4840044 5 0.588395 0.0986116 0.4897839 9.0323e-24 1.0000e+00 hypermethylated 8.2112e-22 1.0000e+00 hypermethylated 1.4898e-12 1.0000e+00 hypermethylated 3.7245e-10 1.000000 hypermethylated 0.4793954 1.7157e-09 lowCoverage 4.2892e-07 lowCoverage 0.585255 0.542614 5.6421e-02 5 0.588395 0.536399 0.0519968 2.0562e-01 0.94928845 insignificant 1.0000e+00 1.000000 insignificant 3.6518e-01 0.88537063 insignificant 1.0000e+00 1.00000 insignificant 0.0365114 6.5451e-01 lowCoverage 1.000000 lowCoverage 0.558460 0.083186 0.448031 5 0.566990 0.0986116 0.4683781 1.3970e-23 1.0000e+00 hypermethylated 1.9957e-21 1.00000000 hypermethylated 3.5561e-11 1.0000000 hypermethylated 8.8903e-09 1 hypermethylated 0.4674667 1.6841e-08 lowCoverage 5.6137e-06 lowCoverage 0.558460 0.542614 0.0353129 5 0.566990 0.536399 0.0305911 2.1711e-01 0.7146907 insignificant 1.0000e+00 1.00000 insignificant 2.9458e-01 0.74942963 insignificant 1.0000e+00 1.00000 insignificant 0.02458273 0.7586588 lowCoverage 1.00000 lowCoverage 0.083186 0.542614 -4.4286e-01 5 0.0986116 0.536399 -0.437787 1.0000e+00 6.5926e-12 hypomethylated 1.0000000 8.2408e-10 hypomethylated 1.00000000 2.1549e-07 hypomethylated 1.00000 4.3098e-05 hypomethylated -0.4428840 1.6522e-03 lowCoverage 0.127094 lowCoverage chr3 41014550 41015550 11802 ZNF621 ENSG00000172888 0.857968 548 13 0.818035 343 8 0.688372 252 13 0.8184681 437 13 0.655467 165 12 0.837915 498 13 0.750498 154 12 0.776533 321 13 0.642027 250 13 0.821473 232 13 0.843334 427 13 0.680837 112 10 0.881601 333 13 0.912609 91 8 0.776940 272 13 0.806777 89 7 0.360069 58 7 0.856474 622 13 0.410844 379 13 0.846463 504 13 0.809563 154 11 0.7840300 234 13 0.853374 278 13 0.798179 148 12 0.823844 150 12 0.808847 539 13 0.847341 243 12 0.740825 136 7 0.724539 334 10 0.7892433 510 13 0.740168 443 12 0.784030 563 13 0.7989264 339 13 0.767661 363 11 0.6948877 231 5 0.6938926 102 7 0.781216 195 11 0.7472700 579 13 0.808314 560 13 0.8538773 553 13 0.903120 483 13 0.77630 596 13 0.777074 479 13 0.842841 0.778559 0.763317 0.8581912 0.690763 0.880605 0.772374 0.793201 0.657106 0.771842 0.820057 0.650068 0.887428 0.837206 0.7745940 0.753564 0.474396 0.817446 0.375583 0.849969 0.863528 0.8011101 0.856377 0.895843 0.804322 0.813439 0.858321 0.838092 0.775408 0.8566010 0.7694967 0.776085 0.7869459 0.7548515 0.8194681 0.7643601 0.821465 0.7797389 0.8974415 0.9036234 0.9154449 0.815204 0.865472 5 0.782201 0.809218 -0.04581358 13 0.737564 0.749656 -0.0120916 0.990850 2.0023e-02 weaklyHypometh 1 1.0000e+00 insignificant 0.982172 6.1598e-02 insignificant 1 1.000000 insignificant -0.0398634 0.263845 insignificant 1 insignificant 0.782258 0.726368 0.0515966 13 0.742291 0.7332751 0.0090158 3.7712e-05 1.0523e-02 weaklyHypermeth 9.4279e-04 1.0000e+00 weaklyHypermeth 6.4397e-01 9.7095e-04 inconclusive 1.0000e+00 0.194191 insignificant 0.0048262 8.9847e-01 insignificant 1.0000e+00 insignificant 0.782544 0.858106 -8.3596e-02 13 0.772610 0.722631 0.0499788 9.9998e-01 0.00729095 weaklyHypometh 1.0000e+00 0.735394 insignificant 9.9363e-01 0.00080456 weaklyHypometh 1.0000e+00 0.40302 insignificant -0.0716026 9.5850e-02 insignificant 1.000000 insignificant 0.809651 0.726368 0.044084 13 0.799633 0.7332751 0.0663579 1.0346e-04 4.0509e-02 weaklyHypermeth 2.4060e-03 1.00000000 weaklyHypermeth 3.5239e-01 0.0484801 inconclusive 1.0000e+00 1 insignificant 0.0446896 6.7400e-02 insignificant 1.0000e+00 insignificant 0.809651 0.858374 -0.0557833 13 0.799633 0.752315 0.0473182 9.8036e-01 0.0282620 weaklyHypometh 1.0000e+00 1.00000 insignificant 9.5515e-01 0.03668946 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.03173920 0.2857985 insignificant 1.00000 insignificant 0.726368 0.858374 -1.3175e-01 13 0.7332751 0.752315 -0.019040 7.5280e-01 1.9651e-03 weaklyHypometh 1.0000000 4.6094e-02 weaklyHypometh 0.69682542 5.4066e-01 insignificant 1.00000 1.0000e+00 insignificant -0.0764288 3.6841e-02 weaklyHypometh 1.000000 insignificant chr3 42795050 42796050 11858 ENSG00000173811 0.885168 194 6 0.772602 71 5 0.789722 57 5 0.9204678 93 6 0.925000 34 5 0.877556 95 5 0.821667 47 5 0.920833 31 2 0.565000 28 4 0.587302 24 2 0.923175 121 5 0.611111 43 4 0.885948 48 4 NA 0 0 0.881429 41 2 0.930736 49 5 0.681624 39 2 0.929293 87 5 0.839438 46 5 0.922644 83 5 0.733333 16 2 0.8872727 28 2 0.865896 95 6 0.850000 21 2 0.958333 14 2 0.930682 61 5 0.791667 21 2 0.761905 13 2 0.846688 42 3 0.7525527 67 4 0.954941 48 2 0.811209 155 6 0.7840188 61 5 0.661111 29 2 0.8577327 97 5 0.6964286 33 4 0.738095 22 2 0.8947281 80 5 0.936977 143 6 0.9623917 181 6 0.898747 138 6 0.90861 219 6 0.965005 149 6 0.895177 0.829656 0.686598 0.9138756 0.890260 0.876559 0.836255 0.837392 0.772186 0.907854 0.881763 0.936147 0.913191 NA 0.8512987 0.929499 0.791875 0.856487 0.838495 0.897505 0.745455 0.7541913 0.894230 0.866792 0.928976 0.908491 0.815493 0.788437 0.753039 0.8230776 0.9070376 0.870915 0.8094760 0.6583694 0.7862115 0.9039889 0.892703 0.7800777 0.8985509 0.9576193 0.8399206 0.921682 0.934890 2 0.861089 0.838210 0.02426603 4 0.857274 0.836322 0.0209520 0.221015 8.3898e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.632716 2.8534e-01 lowCoverage 1 1.000000 lowCoverage -0.0205988 0.574299 lowCoverage 1 lowCoverage 0.861089 0.788820 0.0723431 4 0.857274 0.7844452 0.0728285 2.1745e-03 9.8044e-01 lowCoverage 3.6241e-02 1.0000e+00 lowCoverage 4.9163e-02 9.8896e-01 lowCoverage 8.3327e-01 1.000000 lowCoverage 0.0527554 2.8389e-01 lowCoverage 1.0000e+00 lowCoverage 0.861089 0.933735 -6.2944e-02 5 0.857274 0.933535 -0.0762609 9.9950e-01 0.02387168 weaklyHypometh 1.0000e+00 1.000000 insignificant 9.9875e-01 0.01500989 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.1095719 2.1501e-03 lowCoverage 0.275653 lowCoverage 0.838210 0.788820 0.046731 4 0.836322 0.7844452 0.0518765 3.9680e-02 8.5848e-01 lowCoverage 5.1916e-01 1.00000000 lowCoverage 1.6708e-02 0.9434816 lowCoverage 3.2761e-01 1 lowCoverage 0.0733542 1.2709e-01 lowCoverage 1.0000e+00 lowCoverage 0.838210 0.933735 -0.0813431 4 0.836322 0.933535 -0.0972130 9.9990e-01 0.0010935 lowCoverage 1.0000e+00 0.40834 lowCoverage 8.3239e-01 0.09123580 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.08897314 0.0039903 lowCoverage 0.49879 lowCoverage 0.788820 0.933735 -1.2777e-01 4 0.7844452 0.933535 -0.149089 9.9998e-01 1.4449e-04 lowCoverage 1.0000000 5.7798e-03 lowCoverage 0.99985895 1.8387e-03 lowCoverage 1.00000 9.1935e-02 lowCoverage -0.1623273 5.8449e-03 lowCoverage 0.292245 lowCoverage chr3 43341550 43342550 11874 ENSG00000210484,ENSG00000222330 0.612248 235 7 0.535504 138 7 0.591834 132 7 0.6430273 134 7 0.574026 74 7 0.614893 289 7 0.551020 91 7 0.539928 112 7 0.629660 97 7 0.614594 76 5 0.642036 241 7 0.425974 57 5 0.586992 81 7 0.733333 20 3 0.647103 78 7 0.654762 42 5 0.701141 45 5 0.656889 129 7 0.641117 141 7 0.662044 169 7 0.722222 26 2 0.6732468 37 4 0.663069 149 7 0.735931 58 7 0.689456 46 4 0.574455 187 7 0.720370 68 5 0.485714 32 3 0.603657 97 7 0.6005719 153 7 0.731941 171 7 0.503195 297 7 0.5565306 107 7 0.538040 106 7 0.5482808 180 7 0.7795918 28 4 0.520301 46 4 0.6354335 111 7 0.725654 197 7 0.6524570 170 7 0.654281 164 7 0.65287 179 7 0.703299 140 7 0.616740 0.591334 0.629986 0.6833080 0.604403 0.654014 0.649596 0.579232 0.670249 0.702927 0.673040 0.524300 0.616811 0.606402 0.6798132 0.711740 0.594883 0.677640 0.668528 0.674760 0.685535 0.6915501 0.709848 0.775300 0.749730 0.570920 0.706463 0.672956 0.636827 0.6402824 0.6947400 0.619058 0.6459075 0.5703029 0.5427551 0.7277628 0.604071 0.6818994 0.7251253 0.7148683 0.6829419 0.659444 0.732537 3 0.651827 0.680545 -0.00912505 7 0.728455 0.636310 0.0921445 0.947526 5.9704e-01 insignificant 1 1.0000e+00 insignificant 0.996800 3.1888e-01 insignificant 1 1.000000 insignificant -0.0290795 0.335387 insignificant 1 insignificant 0.651388 0.629758 0.0573138 7 0.612079 0.5659451 0.0461334 5.4962e-04 9.3567e-01 weaklyHypermeth 1.0570e-02 1.0000e+00 weaklyHypermeth 1.3300e-01 8.3497e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0165434 7.1140e-01 insignificant 1.0000e+00 insignificant 0.651388 0.681176 -5.5824e-02 7 0.612079 0.675699 -0.0636205 9.9928e-01 0.00087378 weaklyHypometh 1.0000e+00 0.218444 insignificant 9.9891e-01 0.00273674 weaklyHypometh 1.0000e+00 0.45612 insignificant -0.0648053 1.0160e-02 weaklyHypometh 0.632806 insignificant 0.680851 0.629758 0.067429 7 0.623301 0.5659451 0.0573556 2.8819e-04 9.6562e-01 weaklyHypermeth 6.2649e-03 1.00000000 weaklyHypermeth 3.4555e-02 0.9792733 weaklyHypermeth 5.7592e-01 1 insignificant 0.0456229 3.6064e-01 insignificant 1.0000e+00 insignificant 0.680851 0.681176 -0.0447386 7 0.623301 0.675699 -0.0523983 9.9570e-01 0.0682541 insignificant 1.0000e+00 1.00000 insignificant 9.5824e-01 0.28857331 insignificant 1.0000e+00 1.00000 insignificant -0.03572578 0.2468192 insignificant 1.00000 insignificant 0.629758 0.681176 -1.1248e-01 7 0.5659451 0.675699 -0.109754 9.9953e-01 1.2736e-04 weaklyHypometh 1.0000000 5.5917e-03 weaklyHypometh 0.99709200 1.1021e-02 weaklyHypometh 1.00000 2.8258e-01 insignificant -0.0813487 1.0385e-01 insignificant 1.000000 insignificant chr3 43785650 43786650 11900 ABHD5 ENSG00000011198 0.055112 606 12 0.033135 562 13 0.029459 554 13 0.0603500 456 9 0.072098 251 9 0.129189 598 12 0.061984 393 9 0.058534 339 9 0.047274 503 9 0.053349 405 9 0.048341 401 9 0.061749 386 9 0.038085 334 9 0.114286 91 5 0.053552 390 9 0.062327 301 9 0.032598 520 9 0.042488 528 9 0.066536 192 9 0.101007 624 13 0.147739 156 9 0.0591845 358 9 0.072855 511 13 0.061553 234 9 0.066632 252 9 0.048342 650 13 0.030455 291 9 0.030800 237 9 0.077173 250 9 0.0368052 602 13 0.040737 528 13 0.108927 637 13 0.0254274 525 13 0.020450 214 9 0.0500000 100 4 0.0000000 168 9 0.031388 163 9 0.0218816 436 13 0.068390 714 9 0.0963811 546 13 0.056240 516 9 0.19969 494 9 0.036748 712 9 0.080317 0.052863 0.045839 0.0539366 0.074989 0.091075 0.072272 0.071160 0.053342 0.064853 0.060765 0.069807 0.036264 0.075993 0.0616316 0.078467 0.026067 0.062644 0.053370 0.062829 0.154149 0.0622402 0.079175 0.064141 0.072148 0.070220 0.033122 0.034035 0.088280 0.0545716 0.0604256 0.090920 0.0118618 0.0177969 0.0524586 0.0000000 0.026742 0.0234084 0.0753637 0.1116727 0.0642928 0.101507 0.056292 9 0.061181 0.062473 -0.00581501 12 0.056112 0.054288 0.0018242 0.773141 6.8184e-01 insignificant 1 1.0000e+00 insignificant 0.891131 7.1070e-01 insignificant 1 1.000000 insignificant -0.0040277 0.731425 insignificant 1 insignificant 0.061181 0.016189 0.0422871 12 0.056112 0.0184696 0.0376428 1.1463e-07 9.9999e-01 weaklyHypermeth 4.7764e-06 1.0000e+00 weaklyHypermeth 1.1073e-06 1.0000e+00 weaklyHypermeth 9.2277e-05 1.000000 weaklyHypermeth 0.0362147 1.1653e-03 weaklyHypermeth 8.9642e-02 weaklyHypermeth 0.061181 0.080148 -1.8475e-02 9 0.056112 0.087300 -0.0311876 7.5349e-01 0.00013598 weaklyHypometh 1.0000e+00 0.067988 weaklyHypometh 9.2850e-01 0.00517734 weaklyHypometh 1.0000e+00 0.70274 insignificant -0.0304163 3.5389e-01 insignificant 1.000000 insignificant 0.062473 0.016189 0.044855 13 0.054288 0.0184696 0.0358187 1.2902e-05 1.0000e+00 weaklyHypermeth 4.4491e-04 1.00000000 weaklyHypermeth 2.4628e-05 1.0000000 weaklyHypermeth 1.7592e-03 1 weaklyHypermeth 0.0402424 3.9356e-03 weaklyHypermeth 2.3150e-01 insignificant 0.062473 0.080148 -0.0109359 9 0.054288 0.087300 -0.0330118 8.6663e-01 0.0015651 weaklyHypometh 1.0000e+00 0.40834 insignificant 8.3075e-01 0.02241438 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.02638860 0.4251155 insignificant 1.00000 insignificant 0.016189 0.080148 -6.0660e-02 9 0.0184696 0.087300 -0.068830 9.9982e-01 1.3782e-07 weaklyHypometh 1.0000000 9.8445e-06 weaklyHypometh 0.99999876 2.7179e-06 weaklyHypometh 1.00000 3.0199e-04 weaklyHypometh -0.0666310 8.0219e-02 insignificant 1.000000 insignificant chr3 43910250 43911250 11908 ABHD5 ENSG00000011198 0.045407 1699 33 0.031186 1470 33 0.091417 1185 33 0.0143264 1195 32 0.073500 1085 33 0.080107 2357 33 0.073175 1537 33 0.093820 1353 32 0.021577 1767 33 0.028347 1695 33 0.041314 1568 33 0.021213 1301 33 0.072812 1212 33 0.054377 890 25 0.040385 1954 33 0.018741 1479 33 0.060099 553 22 0.060433 1563 32 0.118770 1441 33 0.061986 1899 33 0.041744 489 24 0.1019279 571 25 0.042128 1206 33 0.019513 956 32 0.080182 437 28 0.051330 2028 33 0.030151 1273 33 0.013638 720 29 0.036185 1441 33 0.0339293 2211 33 0.059964 2165 33 0.077599 2297 33 0.0170533 1255 33 0.014396 971 33 0.0185065 1249 23 0.0516983 221 15 0.048855 983 27 0.1187505 2234 33 0.085054 2482 33 0.0707668 1770 33 0.025832 1342 33 0.04524 1686 33 0.041913 1346 33 0.066757 0.047650 0.121009 0.0226360 0.069568 0.046543 0.076534 0.060496 0.031038 0.048195 0.066991 0.029699 0.107821 0.074662 0.0594850 0.030437 0.064920 0.049574 0.070503 0.051432 0.058263 0.1288545 0.047772 0.036294 0.085274 0.098413 0.046750 0.030315 0.056400 0.0507056 0.1095580 0.044513 0.0298657 0.0175783 0.0155876 0.0641812 0.037438 0.0609713 0.0851641 0.0696781 0.0367271 0.074221 0.061465 26 0.046348 0.051508 -0.00530266 33 0.074803 0.060249 0.0145540 1.000000 8.5412e-01 insignificant 1 1.0000e+00 insignificant 0.999157 9.9897e-01 insignificant 1 1.000000 insignificant 0.0061252 0.544398 insignificant 1 insignificant 0.046454 0.023878 0.0139508 33 0.103115 0.0977050 0.0054095 2.4892e-03 1.0000e+00 weaklyHypermeth 4.0149e-02 1.0000e+00 weaklyHypermeth 8.0485e-04 1.0000e+00 weaklyHypermeth 2.9809e-02 1.000000 weaklyHypermeth 0.0102729 5.7588e-01 insignificant 1.0000e+00 insignificant 0.046083 0.051936 -4.8363e-03 33 0.042034 0.059342 -0.0173076 2.2762e-01 0.53642008 insignificant 1.0000e+00 1.000000 insignificant 3.9754e-01 0.80393851 insignificant 1.0000e+00 1.00000 insignificant 0.0013885 9.1400e-01 insignificant 1.000000 insignificant 0.051537 0.023734 0.019064 33 0.066943 0.0754828 -0.0085394 4.5791e-03 1.0000e+00 weaklyHypermeth 7.4625e-02 1.00000000 weaklyHypermeth 1.3012e-02 1.0000000 weaklyHypermeth 2.6556e-01 1 insignificant 0.0041477 8.2360e-01 insignificant 1.0000e+00 insignificant 0.051378 0.051936 0.0012872 33 0.039801 0.059342 -0.0195404 7.4666e-02 0.9972161 insignificant 1.0000e+00 1.00000 insignificant 4.3730e-01 0.97416616 insignificant 1.0000e+00 1.00000 insignificant -0.00473669 0.7263759 insignificant 1.00000 insignificant 0.023205 0.051844 -1.4154e-02 33 0.0377493 0.054189 -0.016440 9.9939e-01 1.5647e-02 weaklyHypometh 1.0000000 2.4092e-01 insignificant 0.99996003 2.8890e-02 weaklyHypometh 1.00000 5.3499e-01 insignificant -0.0088844 6.5901e-01 insignificant 1.000000 insignificant chr3 45128550 45129550 11948 CLEC3B ENSG00000163815 0.944039 384 5 0.841985 228 5 0.932422 195 5 0.9325746 279 5 0.962338 103 5 0.924894 371 5 0.971829 174 5 0.930630 208 5 0.896717 264 5 0.944386 181 5 0.587912 197 5 0.868558 183 5 0.953354 245 5 0.928683 101 4 0.926798 201 5 0.904429 129 5 0.939118 112 5 0.935982 360 5 0.937148 136 5 0.822312 308 5 0.724672 65 4 0.9149134 141 5 0.944498 224 5 0.870967 87 5 0.970486 70 5 0.972295 278 5 0.918320 124 5 0.648708 107 5 0.932441 214 5 0.9801030 242 5 0.962220 219 5 0.948805 313 5 0.9648649 203 5 0.972950 92 5 0.8000000 73 3 0.9764706 53 4 0.944297 134 5 0.9433426 247 5 0.907863 383 5 0.9638197 302 5 0.877191 239 5 0.91014 346 5 0.948277 475 5 0.946167 0.841881 0.919532 0.9217951 0.942496 0.922505 0.942358 0.925020 0.874060 0.942123 0.925775 0.859114 0.944254 0.900209 0.9248011 0.888818 0.953574 0.930316 0.929292 0.949611 0.885168 0.9241937 0.940687 0.859777 0.958681 0.956598 0.910495 0.915960 0.920998 0.9701629 0.9563395 0.942876 0.9404655 0.9697384 0.9855297 0.9601307 0.934971 0.9366313 0.9105378 0.9613442 0.8746860 0.900031 0.942017 5 0.922194 0.933781 -0.01732372 5 0.830137 0.832359 -0.0022212 0.779956 1.1537e-01 insignificant 1 1.0000e+00 insignificant 0.749428 3.6200e-01 insignificant 1 1.000000 insignificant 0.0052697 0.883844 lowCoverage 1 lowCoverage 0.922776 0.943890 -0.0291443 5 0.940183 0.8304678 0.1097154 9.7164e-01 1.1577e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9760e-01 2.5361e-03 weaklyHypometh 1.0000e+00 0.422677 insignificant -0.0293486 3.9592e-01 lowCoverage 1.0000e+00 lowCoverage 0.922759 0.925501 6.7042e-05 5 0.928220 0.925077 0.0031432 5.2072e-01 0.78341311 insignificant 1.0000e+00 1.000000 insignificant 3.3466e-01 0.89085162 insignificant 1.0000e+00 1.00000 insignificant -0.0171521 4.8927e-01 lowCoverage 1.000000 lowCoverage 0.934103 0.943890 -0.010782 5 0.818145 0.8304678 -0.0123231 6.9916e-01 6.4449e-02 insignificant 1.0000e+00 1.00000000 insignificant 9.9515e-01 0.0043839 weaklyHypometh 1.0000e+00 1 insignificant -0.0346183 4.0985e-01 lowCoverage 1.0000e+00 lowCoverage 0.935873 0.925501 0.0167149 5 0.941774 0.925077 0.0166970 1.4353e-01 0.9645411 insignificant 1.0000e+00 1.00000 insignificant 2.1171e-01 0.97109765 insignificant 1.0000e+00 1.00000 insignificant -0.02242176 0.5200075 lowCoverage 1.00000 lowCoverage 0.948557 0.925501 3.1205e-02 5 0.9565613 0.925077 0.031485 4.6286e-03 9.5374e-01 weaklyHypermeth 0.7714382 1.0000e+00 insignificant 0.00064850 9.9987e-01 weaklyHypermeth 0.21617 1.0000e+00 insignificant 0.0121965 7.0829e-01 lowCoverage 1.000000 lowCoverage chr3 45150150 45151150 11956 CLEC3B ENSG00000163815 0.703679 111 7 0.596720 126 8 0.624107 52 7 0.6375000 65 8 0.772161 81 8 0.775378 103 6 0.750746 90 8 0.762361 111 8 0.838492 44 6 0.725289 63 8 0.689427 218 8 0.769643 28 3 0.615873 100 8 0.791306 63 8 0.580357 61 8 0.716518 37 2 0.480994 37 2 0.551299 72 7 0.777727 94 5 0.595139 59 6 0.875000 27 1 0.5714286 10 0 0.712283 75 8 0.604167 38 4 0.640476 50 5 0.798353 131 6 0.832639 43 4 0.769841 24 2 0.689207 83 8 0.7020833 89 6 0.688456 111 6 0.776136 65 6 0.6562296 97 8 0.579464 53 6 0.7464165 119 6 0.6875000 20 0 0.630456 61 6 0.7130647 86 6 0.649868 89 6 0.6729167 89 8 0.667448 114 8 0.70930 73 7 0.746491 106 8 0.704963 0.546562 0.606929 0.6310000 0.688901 0.721565 0.697344 0.729019 0.809214 0.592698 0.685765 0.739429 0.735635 0.772843 0.5576190 0.700357 0.648455 0.632131 0.770135 0.598167 0.810000 0.5214242 0.682592 0.635667 0.708810 0.723026 0.790278 0.785714 0.678655 0.6927083 0.7101704 0.723000 0.6481291 0.6188571 0.7181732 0.7550000 0.649266 0.7047940 0.6481719 0.7110000 0.6755446 0.715777 0.720694 0 0.705518 0.721180 -0.02221292 7 0.694691 0.731578 -0.0368870 0.930543 2.9471e-01 insignificant 1 1.0000e+00 insignificant 0.998638 1.0804e-01 insignificant 1 1.000000 insignificant -0.0339366 0.330147 lowCoverage 1 lowCoverage 0.705518 0.692661 0.0054727 6 0.694691 0.7000291 -0.0053386 3.2157e-01 6.0188e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.6353e-01 7.7513e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0188805 5.7194e-01 insignificant 1.0000e+00 insignificant 0.705257 0.730361 -1.8075e-03 8 0.702750 0.695343 0.0074074 3.1224e-01 0.33799707 insignificant 1.0000e+00 1.000000 insignificant 3.1147e-01 0.30201657 insignificant 1.0000e+00 1.00000 insignificant -0.0014682 9.5823e-01 insignificant 1.000000 insignificant 0.722148 0.691954 0.031237 6 0.798085 0.6727591 0.1253255 1.8063e-01 9.6354e-01 insignificant 1.0000e+00 1.00000000 insignificant 1.4465e-01 0.9947330 insignificant 1.0000e+00 1 insignificant 0.0528172 1.6419e-01 lowCoverage 1.0000e+00 lowCoverage 0.720648 0.730361 0.0143445 7 0.722366 0.695343 0.0270236 3.7620e-01 0.7145879 insignificant 1.0000e+00 1.00000 insignificant 7.4099e-02 0.79674363 insignificant 1.0000e+00 1.00000 insignificant 0.03246840 0.3209051 lowCoverage 1.00000 lowCoverage 0.692130 0.730361 -1.8642e-02 6 0.6750437 0.695343 -0.020299 7.7020e-01 1.6394e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.89888646 3.4795e-01 insignificant 1.00000 1.0000e+00 insignificant -0.0203488 5.1472e-01 insignificant 1.000000 insignificant chr3 45237150 45238150 11971 CDCP1 ENSG00000163814 0.638257 205 10 0.594455 171 10 0.491396 84 10 0.6944095 193 10 0.459584 81 6 0.684238 259 10 0.460606 82 6 0.608575 136 8 0.634517 83 10 0.715278 48 4 0.660902 278 10 0.491667 43 2 0.665126 120 10 0.678692 103 10 0.706336 63 4 0.597222 27 3 0.598371 85 3 0.762296 162 10 0.730833 97 8 0.784296 165 8 0.785000 32 2 0.7823810 53 4 0.533287 93 10 0.550909 98 10 0.662434 47 4 0.707299 192 8 0.676984 79 8 0.598148 31 3 0.665778 78 4 0.7590990 168 8 0.736754 153 8 0.751768 259 10 0.5886535 137 10 0.463049 85 8 0.7681067 200 8 0.4444444 19 1 0.424049 87 6 0.7712537 115 8 0.689410 149 10 0.6291278 203 10 0.722554 206 10 0.70556 39 3 0.642874 155 10 0.658504 0.621971 0.476274 0.7553448 0.528140 0.730967 0.480536 0.682130 0.634244 0.528846 0.712646 0.480769 0.679990 0.674319 0.6647786 0.504126 0.671033 0.773301 0.726511 0.784118 0.738846 0.7820513 0.571414 0.581469 0.677640 0.718673 0.732784 0.608688 0.769487 0.7973314 0.7334384 0.768439 0.6369335 0.5055790 0.7727216 0.5743837 0.572694 0.7248532 0.7100233 0.7156607 0.7421245 0.667094 0.709101 1 0.702779 0.730109 -0.02444097 8 0.667657 0.661375 0.0062815 0.878879 1.4642e-01 insignificant 1 1.0000e+00 insignificant 0.957795 4.4083e-02 weaklyHypometh 1 1.000000 insignificant -0.0513006 0.131781 insignificant 1 insignificant 0.703018 0.686916 0.0248799 9 0.695352 0.6714827 0.0238693 1.1407e-01 8.9025e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6675e-02 9.7709e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0562601 4.4452e-01 insignificant 1.0000e+00 insignificant 0.702670 0.776596 -2.9740e-02 10 0.661695 0.680379 -0.0186842 6.6857e-01 0.07209885 insignificant 1.0000e+00 1.000000 insignificant 9.5664e-01 0.04379854 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.0450515 1.2752e-01 insignificant 1.000000 insignificant 0.729540 0.684867 0.051646 8 0.606261 0.5881493 0.0181113 5.1359e-02 9.9687e-01 insignificant 6.4199e-01 1.00000000 insignificant 1.5692e-02 0.9997496 weaklyHypermeth 3.1383e-01 1 insignificant 0.1075607 1.7155e-01 insignificant 1.0000e+00 insignificant 0.731040 0.776596 0.0029538 8 0.694179 0.680379 0.0138001 2.6845e-01 0.3670371 insignificant 1.0000e+00 1.00000 insignificant 2.7436e-01 0.57337514 insignificant 1.0000e+00 1.00000 insignificant 0.00624910 0.8418647 insignificant 1.00000 insignificant 0.685535 0.776596 -4.7274e-02 9 0.6307792 0.680379 -0.049600 8.0059e-01 1.8144e-02 weaklyHypometh 1.0000000 2.7491e-01 insignificant 0.95389615 4.3919e-02 weaklyHypometh 1.00000 7.4439e-01 insignificant -0.1013116 1.8811e-01 insignificant 1.000000 insignificant chr3 46024550 46025550 12000 FYCO1 ENSG00000163820 0.849689 396 9 0.859892 117 6 0.888864 164 8 0.9195448 259 10 0.952564 65 7 0.876026 375 9 0.930998 152 8 0.931460 160 8 0.859718 163 7 0.959259 109 7 0.847469 150 7 0.921337 88 6 0.932717 111 7 0.800000 8 0 0.961188 149 6 0.994444 86 7 0.951465 262 7 0.954268 291 7 0.891607 149 7 0.752180 316 9 0.853956 57 6 0.9393346 139 8 0.792427 143 10 0.890717 87 8 0.826531 91 6 0.855271 191 8 0.763067 137 7 0.916540 97 7 0.899978 113 6 0.9022362 207 8 0.859332 143 9 0.813665 368 10 0.8690906 150 6 0.862411 78 6 0.7693191 196 9 0.8820221 101 7 0.879508 108 8 0.7409899 224 7 0.887129 380 9 0.9328638 270 8 0.796681 296 8 0.81633 314 7 0.927530 332 8 0.948810 0.832936 0.893344 0.9254524 0.928168 0.942146 0.922185 0.939121 0.886060 0.975825 0.905099 0.889588 0.962302 0.952057 0.9462027 0.989617 0.976378 0.937710 0.933528 0.876906 0.857198 0.9383365 0.902467 0.894117 0.965650 0.959546 0.864710 0.930623 0.896129 0.9579536 0.9253546 0.915808 0.9150237 0.8752791 0.7502129 0.8838175 0.887614 0.9414876 0.9458499 0.9587042 0.9227293 0.948182 0.979948 6 0.909524 0.901297 0.00904650 8 0.851023 0.823566 0.0274570 0.020499 8.1984e-01 weaklyHypermeth 1 1.0000e+00 insignificant 0.012882 9.8395e-01 weaklyHypermeth 1 1.000000 insignificant 0.0423134 0.048779 weaklyHypermeth 1 insignificant 0.909524 0.841307 0.0677589 7 0.851023 0.8047531 0.0462702 1.9136e-03 6.1186e-01 weaklyHypermeth 3.2435e-02 1.0000e+00 weaklyHypermeth 2.0522e-01 5.5721e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0678445 4.5450e-02 weaklyHypermeth 1.0000e+00 insignificant 0.909524 0.933417 -1.9273e-02 8 0.851023 0.892251 -0.0412282 4.4318e-01 0.02219816 weaklyHypometh 1.0000e+00 1.000000 insignificant 7.2922e-01 0.27266299 insignificant 1.0000e+00 1.00000 insignificant 0.0296279 3.7871e-01 insignificant 1.000000 insignificant 0.901297 0.841307 0.056835 7 0.823566 0.8047531 0.0188131 1.8837e-01 5.9088e-01 insignificant 1.0000e+00 1.00000000 insignificant 8.4814e-01 0.2904324 insignificant 1.0000e+00 1 insignificant 0.0255311 4.1155e-01 insignificant 1.0000e+00 insignificant 0.901297 0.933417 -0.0268758 8 0.823566 0.892251 -0.0686852 7.6790e-01 0.0115972 weaklyHypometh 1.0000e+00 1.00000 insignificant 9.8413e-01 0.03846942 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.01268552 0.7045662 insignificant 1.00000 insignificant 0.841307 0.933417 -8.5407e-02 7 0.8047531 0.892251 -0.087498 6.5359e-01 2.2865e-02 weaklyHypometh 1.0000000 3.3138e-01 insignificant 0.74451360 1.2827e-01 insignificant 1.00000 1.0000e+00 insignificant -0.0382166 3.3997e-01 insignificant 1.000000 insignificant chr3 46531850 46532850 12008 RTP3 ENSG00000163825 0.713420 74 5 0.508799 82 5 0.570513 46 5 0.6364522 106 5 0.628571 26 4 0.54243 150 5 0.482143 39 5 0.641244 83 5 0.747449 41 5 0.666667 36 5 0.551405 187 5 0.7500000 12 0 0.68571 51 5 0.721429 23 1 0.844444 21 1 0.0000000 2 0 1.000000 1 0 0.7833333 47 5 0.602381 50 4 0.603030 85 6 0.750000 31 5 0.700000 18 1 0.595238 40 5 0.7962963 40 5 0.793333 29 5 0.6448371 90 5 0.57037 40 5 0.597222 12 0 0.825758 35 1 0.74389 92 5 0.594619 101 5 0.743687 85 5 0.5085609 69 5 0.663889 42 5 0.547472 91 5 0.750000 8 0 0.761343 55 5 0.5134259 68 5 0.637778 75 5 0.643687 57 5 0.7064103 67 5 1.000000 14 1 0.680329 103 5 0.74207 0.623243 0.724779 0.802032 0.731148 0.692307 0.502342 0.619785 0.701991 0.807963 0.698337 0.745902 0.800000 0.744145 0.854281 NA NA 0.793033 0.654176 0.657228 0.731148 0.721311 0.761124 0.756180 0.797814 0.799427 0.548270 0.633880 0.810233 0.722268 0.657720 0.807253 0.6444020 0.6869308 0.648170 0.7572860 0.726321 0.651867 0.676685 0.794337 0.7393863 1.000000 0.649108 0 0.685026 0.738989 -0.03839435 5 0.65254 0.691883 -0.03934126 0.616981 0.0308830 weaklyHypometh 1 1 insignificant 0.5760221 0.292304 insignificant 1 1 insignificant -0.06229978 0.228104 lowCoverage 1 lowCoverage 0.683665 0.666667 0.0197000 5 0.594632 0.592017 0.00261500 1.2815e-01 2.1627e-01 insignificant 1.0000e+00 1.0000000 insignificant 4.3308e-02 4.1826e-01 weaklyHypermeth 6.5618e-01 1.0000000 insignificant 0.0098561 8.8010e-01 lowCoverage 1.00000000 lowCoverage 0.683665 0.693038 -0.01141548 5 0.594632 0.65137 -0.0567330 0.8373073 3.3913e-01 insignificant 1.00000 1.000000 insignificant 0.9586891 1.9681e-01 insignificant 1.00000 1.0000000 insignificant -0.09966968 2.5138e-01 lowCoverage 1.0000000 lowCoverage 0.73892 0.666667 0.062224 5 0.682197 0.592017 0.0901798 1.5481e-02 9.4295e-01 weaklyHypermeth 2.1882e-01 1.000000 insignificant 6.6680e-02 0.9739345 insignificant 8.8906e-01 1.00000 insignificant 0.0721558 2.2029e-01 lowCoverage 1.00000000 lowCoverage 0.738916 0.693038 0.0254198 5 0.682197 0.65137 0.0308318 0.23452595 6.4070e-01 insignificant 1.0000000 1.000000 insignificant 0.8967739 0.2621274 insignificant 1.00000 1 insignificant -0.0373699 0.6282426 lowCoverage 1.00000 lowCoverage 0.666667 0.693038 -0.0319246 5 0.592017 0.651365 -0.0593480 0.15492423 5.0041e-02 insignificant 1.000000 6.4155e-01 insignificant 0.80386188 3.3757e-02 weaklyHypometh 1.00000 5.6262e-01 insignificant -0.109526 2.2480e-01 lowCoverage 1.00000000 lowCoverage chr3 46566050 46567050 12014 RTP3 ENSG00000163825 0.868026 246 6 0.856219 88 5 0.682540 65 6 0.8208742 92 6 0.859402 44 5 0.83518 178 6 0.813228 78 6 0.964815 59 5 0.906863 66 5 0.832870 62 6 0.802878 176 6 0.6918884 79 6 0.93333 57 5 NA 0 0 0.817248 89 6 0.6848485 49 4 0.746187 69 6 0.7808338 158 6 0.708242 75 6 0.969602 137 6 0.932644 53 2 0.880405 97 6 0.841095 107 6 0.6820175 47 2 0.890278 54 6 0.7911706 129 6 0.82132 89 6 0.825792 51 2 0.621534 73 6 0.87562 93 6 0.801786 76 6 0.853575 254 6 0.7233796 83 4 0.730355 106 6 0.794192 128 6 0.797277 60 5 0.843171 59 2 0.6603175 52 5 0.855827 220 6 0.793718 191 6 0.9233143 138 6 0.826778 238 6 0.786299 232 6 0.90350 0.833669 0.752571 0.874074 0.904283 0.855892 0.793727 0.946868 0.888955 0.859707 0.804247 0.735781 0.889362 NA 0.811014 0.6050935 0.801001 0.744576 0.782207 0.979287 0.884608 0.867379 0.809593 0.676628 0.847828 0.810439 0.745141 0.849849 0.656977 0.918721 0.852020 0.898018 0.7365544 0.7090439 0.851991 0.6869733 0.772588 0.708764 0.900282 0.780209 0.9700855 0.828062 0.779322 2 0.829673 0.820125 0.01149522 6 0.82329 0.814682 0.00860302 0.481491 0.7433962 insignificant 1 1 insignificant 0.6645281 0.508811 insignificant 1 1 insignificant 0.00163714 0.960413 insignificant 1 insignificant 0.829673 0.756148 0.0764221 6 0.823285 0.758007 0.06527786 3.5865e-03 9.9768e-01 weaklyHypermeth 5.5177e-02 1.0000000 weaklyHypermeth 4.5183e-02 9.3140e-01 weaklyHypermeth 6.6446e-01 1.0000000 insignificant 0.0616255 9.3947e-02 lowCoverage 1.00000000 lowCoverage 0.829673 0.832188 -0.00140186 6 0.823285 0.82379 -0.0005095 0.7531833 4.4051e-01 insignificant 1.00000 1.000000 insignificant 0.8673687 4.3439e-01 insignificant 1.00000 1.0000000 insignificant -0.01744666 5.9924e-01 insignificant 1.0000000 insignificant 0.82012 0.756148 0.061862 6 0.814682 0.758007 0.0566748 1.8312e-02 9.9297e-01 weaklyHypermeth 2.4746e-01 1.000000 insignificant 7.2359e-02 0.9578696 insignificant 9.5209e-01 1.00000 insignificant 0.0599883 1.2851e-01 lowCoverage 1.00000000 lowCoverage 0.820125 0.832188 -0.0082091 6 0.814682 0.82379 -0.0091125 0.86167513 2.9341e-01 insignificant 1.0000000 1.000000 insignificant 0.7456942 0.2907661 insignificant 1.00000 1 insignificant -0.0190838 0.6014606 insignificant 1.00000 insignificant 0.756148 0.832188 -0.0698978 6 0.758007 0.823795 -0.0657874 0.98594780 2.2339e-02 weaklyHypometh 1.000000 3.1463e-01 insignificant 0.87734102 1.1651e-01 insignificant 1.00000 1.0000e+00 insignificant -0.079072 5.8941e-02 lowCoverage 1.00000000 lowCoverage chr3 47167850 47168850 12034 SETD2 ENSG00000181555 0.638710 138 5 0.680735 80 5 0.478728 80 5 0.5371429 100 5 0.519048 62 5 0.64040 197 5 0.576828 107 5 0.587216 69 5 0.550833 79 5 0.574913 62 5 0.681522 126 5 0.4736111 52 5 0.57404 135 5 NA 0 0 0.641818 91 5 0.5316667 70 5 0.612088 63 5 0.6556373 75 5 0.689476 131 5 0.654230 145 5 0.560000 39 5 0.640207 69 5 0.684242 85 5 0.6471212 48 5 0.468095 29 4 0.6716380 164 5 0.49544 51 5 0.533766 47 5 0.622121 59 5 0.61705 167 5 0.573062 170 5 0.626245 272 5 0.5568713 83 5 0.517086 66 5 0.699564 138 5 0.581717 54 5 0.605682 52 5 0.6155916 168 5 0.653236 85 5 0.757721 126 5 0.6217293 95 5 0.642027 146 5 0.690699 122 5 0.62268 0.663940 0.466756 0.527493 0.506553 0.633672 0.563646 0.573983 0.533352 0.553953 0.672021 0.453969 0.563393 NA 0.626751 0.5063073 0.592903 0.637806 0.679010 0.646115 0.555849 0.647223 0.669320 0.623697 0.447958 0.663053 0.480804 0.535768 0.617862 0.604245 0.562741 0.614532 0.5556374 0.5247979 0.706618 0.5636734 0.583293 0.610253 0.634237 0.745294 0.6024781 0.621205 0.676436 5 0.601504 0.620000 -0.01046457 5 0.60589 0.615506 -0.00961744 0.378091 0.2909417 insignificant 1 1 insignificant 0.4903515 0.400364 insignificant 1 1 insignificant -0.00025018 0.992168 lowCoverage 1 lowCoverage 0.601504 0.618538 -0.0059120 5 0.605888 0.607904 -0.00201583 1.2509e-02 1.4359e-01 inconclusive 1.6037e-01 1.0000000 insignificant 2.4121e-01 2.9688e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0014200 9.6282e-01 lowCoverage 1.00000000 lowCoverage 0.601504 0.651568 -0.06775523 5 0.605888 0.67666 -0.0707701 0.9966351 1.7943e-03 weaklyHypometh 1.00000 0.224290 insignificant 0.9998471 9.4639e-04 weaklyHypometh 1.00000 0.1351990 insignificant -0.07841714 2.5854e-02 lowCoverage 0.7604019 lowCoverage 0.62000 0.618538 0.007713 5 0.615506 0.607904 0.0076016 3.0522e-01 4.7183e-01 insignificant 1.0000e+00 1.000000 insignificant 6.4789e-01 0.4819745 insignificant 1.0000e+00 1.00000 insignificant -0.0011698 9.7163e-01 lowCoverage 1.00000000 lowCoverage 0.620000 0.651568 -0.0557894 5 0.615506 0.67666 -0.0611527 0.94652475 1.2792e-02 weaklyHypometh 1.0000000 0.913684 insignificant 0.9929210 0.0062400 weaklyHypometh 1.00000 1 insignificant -0.0781670 0.0314534 lowCoverage 1.00000 lowCoverage 0.618538 0.651568 -0.0569694 5 0.607904 0.676658 -0.0687543 0.73176164 3.2677e-03 weaklyHypometh 1.000000 6.1655e-02 weaklyHypometh 0.91581933 2.9311e-02 weaklyHypometh 1.00000 5.0537e-01 insignificant -0.076997 5.4418e-02 insignificant 1.00000000 insignificant chr3 47519350 47520350 12052 ENSG00000200837 0.827333 86 5 0.585958 107 5 0.585909 47 5 0.7884370 72 5 0.800000 56 5 0.71825 187 5 0.550000 29 2 0.741675 103 5 0.657500 47 5 0.869048 29 2 0.893519 139 5 1.0000000 11 0 0.79013 60 5 0.819444 63 5 0.791111 53 5 0.9047619 27 2 0.733333 20 3 0.7665556 73 5 0.799056 54 5 0.764328 138 5 0.333333 9 0 0.546667 57 5 0.663939 65 5 0.9043860 58 5 0.848333 40 5 0.8065056 107 5 0.80447 83 5 0.920000 23 2 0.762778 84 5 0.86719 102 5 0.804141 110 5 0.870091 144 5 0.6358974 70 5 0.394048 37 5 0.725438 78 5 0.636667 17 1 0.575758 59 5 0.5705747 102 5 0.580303 58 5 0.796905 76 5 0.7115126 70 5 0.779524 67 5 0.743056 69 5 0.83387 0.755935 0.606227 0.778907 0.684000 0.739552 0.615000 0.779703 0.694750 0.828333 0.823452 1.000000 0.803532 0.770000 0.816222 0.8266667 0.786667 0.768744 0.829791 0.795617 0.617105 0.537333 0.691152 0.836263 0.845333 0.838538 0.762288 0.896000 0.799111 0.765627 0.821573 0.766217 0.6600000 0.4247619 0.742988 0.6593333 0.593939 0.601747 0.639242 0.825024 0.7190140 0.798619 0.758750 2 0.762313 0.772109 -0.01284411 5 0.80333 0.847375 -0.04404917 0.939589 0.4458948 insignificant 1 1 insignificant 0.9511889 0.738299 insignificant 1 1 insignificant 0.00833179 0.882022 lowCoverage 1 lowCoverage 0.761043 0.614325 0.1390472 5 0.746652 0.607618 0.13903408 3.2087e-08 1.0000e+00 weaklyHypermeth 9.1676e-07 1.0000000 weaklyHypermeth 6.9743e-06 1.0000e+00 weaklyHypermeth 3.8746e-04 1.0000000 weaklyHypermeth 0.1795870 7.9687e-03 lowCoverage 0.29881155 lowCoverage 0.761803 0.732353 0.01888408 5 0.781473 0.73636 0.0451112 0.4435432 8.5648e-01 insignificant 1.00000 1.000000 insignificant 0.4669705 9.7306e-01 insignificant 1.00000 1.0000000 insignificant 0.04705744 3.3573e-01 lowCoverage 1.0000000 lowCoverage 0.76959 0.614325 0.152966 5 0.761417 0.607618 0.1537991 6.4631e-07 9.9999e-01 weaklyHypermeth 2.0197e-05 1.000000 weaklyHypermeth 4.2416e-05 0.9997941 weaklyHypermeth 2.4121e-03 1.00000 weaklyHypermeth 0.1712552 2.2243e-02 lowCoverage 0.48354826 lowCoverage 0.772469 0.732353 0.0356529 5 0.867454 0.73636 0.1310917 0.65223727 9.9776e-01 insignificant 1.0000000 1.000000 insignificant 0.4740857 0.9886713 insignificant 1.00000 1 insignificant 0.0387256 0.5454474 lowCoverage 1.00000 lowCoverage 0.614325 0.732143 -0.1190769 5 0.607618 0.725452 -0.1178340 0.98159421 2.0927e-04 weaklyHypometh 1.000000 6.3770e-03 weaklyHypometh 0.99277502 1.0635e-03 weaklyHypometh 1.00000 4.7268e-02 weaklyHypometh -0.132530 5.2750e-02 lowCoverage 1.00000000 lowCoverage chr3 47557150 47558150 12053 C3orf75 ENSG00000163832 0.893333 30 4 0.841457 93 5 0.705983 61 5 0.9720280 53 4 0.572650 74 8 0.93684 51 4 0.545192 82 5 0.908333 59 5 0.728105 44 2 0.884259 26 2 0.936259 109 5 0.8875000 31 2 0.33313 42 2 0.428571 20 1 0.914773 50 2 0.9200000 28 4 0.899038 29 2 1.0000000 12 0 0.936531 95 5 0.881818 33 2 0.805556 34 2 1.000000 18 1 0.482158 62 5 0.8358730 55 5 0.892669 63 4 0.9611111 71 5 0.93333 48 5 0.958333 24 2 0.848077 41 2 0.91046 64 5 0.873557 76 5 0.901414 56 5 0.9331034 64 5 0.602513 65 5 1.000000 112 5 0.632937 41 4 0.959596 52 5 0.6731225 76 5 0.984615 50 4 0.983333 32 5 0.8750000 26 3 0.562500 36 6 0.723333 82 3 0.93750 0.875927 0.744747 0.944639 0.903668 0.943615 0.880609 0.923859 0.742102 0.878318 0.919770 0.830729 0.866904 0.842781 0.921993 0.9500000 0.915510 1.000000 0.941921 0.926136 0.854167 1.000000 0.824519 0.789550 0.856884 0.964699 0.958333 0.968750 0.855569 0.917693 0.838756 0.940699 0.9487069 0.7059496 1.000000 0.6765434 0.974747 0.788908 0.990385 0.956597 0.9218750 0.739583 0.917500 0 0.836435 0.855738 0.00669695 5 0.56437 0.570832 -0.00645924 0.617371 0.8912389 insignificant 1 1 insignificant 0.8261438 0.809859 insignificant 1 1 insignificant -0.06058848 0.300848 lowCoverage 1 lowCoverage 0.872188 0.843902 0.0109585 5 0.889663 0.828928 0.06073543 2.2089e-02 1.7716e-01 weaklyHypermeth 2.7270e-01 1.0000000 insignificant 6.3437e-02 3.0180e-01 insignificant 8.8627e-01 1.0000000 insignificant 0.0060780 9.4515e-01 lowCoverage 1.00000000 lowCoverage 0.836435 0.867257 -0.02214428 4 0.564373 0.58493 -0.0205535 0.9901737 2.6590e-01 lowCoverage 1.00000 1.000000 lowCoverage 0.9901932 5.2740e-01 lowCoverage 1.00000 1.0000000 lowCoverage -0.01946642 8.3874e-01 lowCoverage 1.0000000 lowCoverage 0.87270 0.843902 0.021454 5 0.873331 0.828928 0.0444035 1.6508e-01 2.0739e-01 insignificant 1.0000e+00 1.000000 insignificant 1.7465e-01 0.4556623 insignificant 1.0000e+00 1.00000 insignificant 0.0666665 4.4999e-01 lowCoverage 1.00000000 lowCoverage 0.855738 0.867257 -0.0452102 4 0.570832 0.58493 -0.0140942 0.99818279 2.4086e-01 lowCoverage 1.0000000 1.000000 lowCoverage 0.9986883 0.4551895 lowCoverage 1.00000 1 lowCoverage 0.0411221 0.6641167 lowCoverage 1.00000 lowCoverage 0.843902 0.942308 -0.1420744 4 0.828928 0.935882 -0.1069543 0.96674136 8.8395e-02 lowCoverage 1.000000 1.0000e+00 lowCoverage 0.99518563 6.3292e-02 lowCoverage 1.00000 9.1727e-01 lowCoverage -0.025544 8.2215e-01 lowCoverage 1.00000000 lowCoverage chr3 48140650 48141650 12078 ENSG00000213700 0.670321 105 6 0.673611 88 6 0.698413 38 6 0.6696809 128 6 0.709058 70 6 0.69461 91 6 0.535049 80 6 0.655789 82 6 0.722222 42 6 0.822619 33 4 0.673986 92 6 0.6869048 31 3 0.72307 70 6 0.640598 45 4 0.788624 43 6 0.5722222 27 4 0.389583 31 2 0.6663309 105 6 0.592593 37 4 0.853480 48 4 0.777778 21 0 1.000000 6 0 0.551389 55 4 0.5952381 29 4 0.851010 60 2 0.6145003 84 6 0.75635 27 2 0.238095 11 0 0.624411 71 4 0.73729 92 6 0.805702 75 4 0.755495 57 6 0.6524327 90 6 0.694633 74 6 0.592617 72 6 0.714286 22 2 0.589356 61 6 0.5757576 71 5 0.782641 83 6 0.773309 88 6 0.7200096 112 6 0.674308 77 6 0.587879 79 6 0.68865 0.686303 0.705528 0.689900 0.715951 0.701632 0.550146 0.669118 0.733716 0.802778 0.689824 0.725369 0.745686 0.653404 0.811877 0.5965517 0.658668 0.623286 0.601533 0.842680 0.798851 0.866211 0.560345 0.701149 0.845873 0.618884 0.756568 0.298851 0.751958 0.741641 0.814529 0.758558 0.6377793 0.7042118 0.611857 0.7619048 0.594079 0.600836 0.779945 0.773155 0.7390539 0.692127 0.613636 0 0.671073 0.715986 -0.03052938 6 0.71383 0.604036 0.10979196 0.990199 0.0947466 insignificant 1 1 insignificant 0.7755770 0.216723 insignificant 1 1 insignificant -0.02033304 0.736329 lowCoverage 1 lowCoverage 0.670561 0.651282 0.0408378 6 0.666133 0.622571 0.04356155 4.0497e-02 9.6793e-01 weaklyHypermeth 4.4502e-01 1.0000000 insignificant 9.3900e-02 9.9310e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0354249 3.0125e-01 insignificant 1.00000000 insignificant 0.670561 0.703872 -0.01001047 6 0.666133 0.68760 -0.0214629 0.7191746 1.9968e-01 insignificant 1.00000 1.000000 insignificant 0.7099009 2.0293e-01 insignificant 1.00000 1.0000000 insignificant -0.03569094 4.2423e-01 insignificant 1.0000000 insignificant 0.71966 0.651282 0.074934 6 0.704709 0.622571 0.0821376 1.5621e-02 9.9857e-01 weaklyHypermeth 2.1882e-01 1.000000 insignificant 1.5197e-02 0.9994358 weaklyHypermeth 2.8999e-01 1.00000 insignificant 0.0557579 3.6712e-01 lowCoverage 1.00000000 lowCoverage 0.719658 0.703872 0.0226688 6 0.704709 0.68760 0.0171132 0.48832424 7.4109e-01 insignificant 1.0000000 1.000000 insignificant 0.4091952 0.8217412 insignificant 1.00000 1 insignificant -0.0153579 0.8175959 lowCoverage 1.00000 lowCoverage 0.651282 0.703872 -0.0493409 6 0.622571 0.687596 -0.0650244 0.75832652 1.5134e-02 weaklyHypometh 1.000000 2.2588e-01 insignificant 0.90933330 3.1343e-02 weaklyHypometh 1.00000 5.3123e-01 insignificant -0.071116 1.4163e-01 insignificant 1.00000000 insignificant chr3 48610750 48611750 12089 COL7A1 ENSG00000114270 0.934670 208 8 0.881291 215 6 0.639623 148 6 0.9411545 195 8 0.942308 60 4 0.95560 260 8 0.717964 118 8 0.904207 149 8 0.800567 133 6 0.906221 125 6 0.931909 273 8 0.8944444 59 6 0.88592 221 6 0.500000 2 0 0.837324 138 6 0.5888889 26 4 0.837179 59 5 0.6666722 102 7 0.809962 140 6 0.930215 252 6 0.954018 49 5 0.753241 52 6 0.929508 179 6 0.8339286 83 8 0.586195 96 8 0.8958336 270 8 0.68389 70 5 0.942857 31 5 0.913201 240 6 0.92572 296 6 0.876710 276 6 0.869019 348 8 0.1776511 290 8 0.060962 200 8 0.190476 178 6 0.051521 131 8 0.397034 64 6 0.1482980 331 8 0.944042 173 8 0.875201 287 8 0.9202535 159 8 0.888471 220 6 0.761821 137 8 0.93222 0.845776 0.792120 0.934077 0.941713 0.947128 0.838082 0.904815 0.940750 0.857928 0.945488 0.924399 0.885431 NA 0.817944 0.5632302 0.852683 0.589337 0.867657 0.905117 0.932290 0.739748 0.907600 0.837973 0.606359 0.934224 0.815854 0.942710 0.930730 0.955250 0.959367 0.915548 0.2350928 0.0823435 0.203788 0.0666187 0.412045 0.048090 0.959351 0.926623 0.9355255 0.872462 0.850312 5 0.882026 0.905528 -0.02320406 6 0.87676 0.865743 0.01101904 0.624304 0.1291410 insignificant 1 1 insignificant 0.8401637 0.371057 insignificant 1 1 insignificant -0.02170484 0.630433 insignificant 1 insignificant 0.882067 0.130653 0.7452570 6 0.890455 0.212254 0.67820114 5.7759e-72 1.0000e+00 hypermethylated 2.8879e-69 1.0000000 hypermethylated 1.3901e-18 1.0000e+00 hypermethylated 6.9503e-16 1.0000000 hypermethylated 0.6543154 2.0291e-06 hypermethylated 0.00018446 hypermethylated 0.882026 0.900615 -0.01782748 6 0.876762 0.86944 0.0073176 0.8006616 4.1824e-01 insignificant 1.00000 1.000000 insignificant 0.7728720 4.1771e-01 insignificant 1.00000 1.0000000 insignificant -0.05265181 2.4674e-01 insignificant 1.0000000 insignificant 0.90553 0.129195 0.770423 8 0.865743 0.113786 0.7519572 1.1446e-58 1.0000e+00 hypermethylated 5.7228e-56 1.000000 hypermethylated 3.2247e-17 1.0000000 hypermethylated 1.6123e-14 1.00000 hypermethylated 0.6760203 1.0929e-06 hypermethylated 0.00012143 hypermethylated 0.905528 0.900615 0.0068030 8 0.865743 0.86944 -0.0037014 0.61256315 7.5910e-01 insignificant 1.0000000 1.000000 insignificant 0.8947026 0.5397388 insignificant 1.00000 1 insignificant -0.0309470 0.5108960 insignificant 1.00000 insignificant 0.129195 0.900615 -0.7638452 8 0.113786 0.869444 -0.7556587 1.00000000 3.2184e-35 hypomethylated 1.000000 1.6092e-32 hypomethylated 1.00000000 1.3833e-12 hypomethylated 1.00000 6.9163e-10 hypomethylated -0.706967 2.3301e-06 hypomethylated 0.00077669 hypomethylated chr3 49000150 49001150 12102 ARIH2 ENSG00000177479 0.683042 205 10 0.721182 125 7 0.790833 78 5 0.7784275 124 10 0.674048 60 6 0.67328 244 10 0.549766 100 7 0.635150 120 8 0.766667 79 4 0.510417 70 6 0.696924 172 8 0.5993007 60 4 0.74774 134 10 0.562500 31 3 0.655040 98 8 0.7636364 46 4 0.429459 82 6 0.6731710 134 7 0.775524 118 5 0.740159 156 6 0.713492 53 5 0.724026 43 4 0.705688 124 7 0.7916667 49 2 0.884848 36 5 0.7389954 182 8 0.66887 53 5 0.843333 33 4 0.619223 104 7 0.68525 183 10 0.606926 146 10 0.655490 218 10 0.6787712 98 10 0.709091 118 8 0.622372 147 10 0.588485 53 4 0.626587 74 8 0.5310516 131 8 0.730693 177 7 0.797271 242 10 0.7382900 182 10 0.740887 187 6 0.651668 166 10 0.76950 0.821224 0.744670 0.836424 0.808871 0.749725 0.724784 0.777626 0.838515 0.757221 0.825409 0.694544 0.778983 0.749918 0.753321 0.7618828 0.509490 0.747093 0.830941 0.843225 0.783901 0.829347 0.750101 0.856176 0.823235 0.737448 0.715453 0.857530 0.759272 0.767095 0.736181 0.722104 0.7847360 0.7513152 0.677501 0.7749885 0.827915 0.726934 0.826622 0.857814 0.8132752 0.819503 0.824216 4 0.763417 0.759804 0.01401844 5 0.73384 0.703231 0.03060864 0.403846 0.8517547 insignificant 1 1 insignificant 0.6029069 0.624559 insignificant 1 1 insignificant -0.04850485 0.153359 insignificant 1 insignificant 0.763417 0.721417 0.0445570 5 0.733839 0.585737 0.14810210 6.6084e-02 9.9645e-01 insignificant 6.8837e-01 1.0000000 insignificant 1.1052e-01 9.9438e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0452536 2.0660e-01 insignificant 1.00000000 insignificant 0.763016 0.823899 -0.05522975 7 0.687324 0.74354 -0.0562178 0.9984217 1.5269e-02 weaklyHypometh 1.00000 0.727094 insignificant 0.9946068 1.8140e-02 weaklyHypometh 1.00000 0.8245319 insignificant -0.06044833 8.3471e-02 insignificant 1.0000000 insignificant 0.75980 0.721417 0.033243 5 0.703231 0.585737 0.1174935 3.1031e-02 9.8870e-01 weaklyHypermeth 3.6507e-01 1.000000 insignificant 3.8354e-02 0.9919848 weaklyHypermeth 5.8111e-01 1.00000 insignificant 0.0937585 2.0584e-02 weaklyHypermeth 0.45741673 insignificant 0.760494 0.823899 -0.0647324 5 0.689200 0.74354 -0.0543423 0.98194528 1.7928e-03 weaklyHypometh 1.0000000 0.298797 insignificant 0.8591528 0.0325896 weaklyHypometh 1.00000 1 insignificant -0.0119435 0.7296159 insignificant 1.00000 insignificant 0.725649 0.823899 -0.0911502 8 0.661458 0.743542 -0.0820838 0.99937839 1.0188e-04 weaklyHypometh 1.000000 3.5132e-03 weaklyHypometh 0.99958658 4.5681e-03 weaklyHypometh 1.00000 1.2689e-01 insignificant -0.105702 1.4119e-02 weaklyHypometh 0.44122225 insignificant chr3 49405750 49406750 12111 ENSG00000197582 0.687611 182 7 0.737364 104 5 0.851175 92 6 0.7140188 133 6 0.921091 97 6 0.76311 123 7 0.749471 91 5 0.587655 78 6 0.672694 65 4 0.732339 51 4 0.817457 122 6 0.7279461 50 3 0.89631 88 5 0.675794 63 5 0.755998 72 6 0.7746941 55 4 0.750670 186 2 0.7070315 169 6 0.650487 70 6 0.629950 79 5 0.897222 32 3 0.850529 24 2 0.717537 141 6 0.5965909 46 5 0.835036 80 6 0.7558100 164 7 0.73571 46 4 0.865476 37 4 0.773993 94 6 0.78535 196 8 0.743334 168 7 0.753614 75 7 0.6152014 150 6 0.696455 59 4 0.418355 131 6 0.625000 11 0 0.680069 94 6 0.6427669 180 7 0.706060 167 7 0.619341 203 7 0.5913763 196 7 0.670833 113 4 0.786131 182 7 0.85287 0.792911 0.842851 0.827300 0.934649 0.826227 0.853186 0.715624 0.736488 0.903541 0.865658 0.729738 0.883084 0.814776 0.693105 0.7524099 0.900043 0.831852 0.862915 0.728309 0.909491 0.836861 0.685319 0.600497 0.816893 0.806709 0.810665 0.855035 0.819872 0.803462 0.814729 0.805530 0.7562893 0.6935568 0.705078 0.7880553 0.712072 0.774145 0.887532 0.790868 0.7717324 0.916040 0.850554 2 0.818413 0.791289 0.01097046 6 0.73428 0.775481 -0.04119970 0.172795 0.3373134 insignificant 1 1 insignificant 0.4799799 0.626855 insignificant 1 1 insignificant -0.03570753 0.243474 insignificant 1 insignificant 0.818136 0.728595 0.0761297 6 0.704757 0.701329 0.00342779 6.0933e-04 9.7971e-01 weaklyHypermeth 1.1079e-02 1.0000000 weaklyHypermeth 1.4433e-02 9.9966e-01 weaklyHypermeth 2.5774e-01 1.0000000 insignificant 0.1271683 2.4869e-02 lowCoverage 0.60201387 lowCoverage 0.818413 0.815331 0.00994157 6 0.734281 0.63984 0.0944381 0.5049758 9.2717e-01 insignificant 1.00000 1.000000 insignificant 0.4659153 8.9871e-01 insignificant 1.00000 1.0000000 insignificant 0.06539466 1.4015e-01 insignificant 1.0000000 insignificant 0.79163 0.726248 0.070353 7 0.800481 0.631196 0.1692847 2.0217e-02 9.9998e-01 weaklyHypermeth 2.6602e-01 1.000000 insignificant 4.3119e-03 0.9999994 weaklyHypermeth 9.7999e-02 1.00000 weaklyHypermeth 0.1628758 8.0701e-03 lowCoverage 0.23735556 lowCoverage 0.791289 0.815331 0.0078271 7 0.775481 0.63984 0.1356378 0.02667148 8.4800e-01 weaklyHypermeth 0.9878325 1.000000 insignificant 0.3344243 0.8217259 insignificant 1.00000 1 insignificant 0.1011022 0.0405410 weaklyHypermeth 1.00000 insignificant 0.728595 0.816279 -0.0678195 7 0.701329 0.710937 -0.0096077 0.92137932 3.4682e-02 weaklyHypometh 1.000000 4.6432e-01 insignificant 0.99929795 8.2648e-02 insignificant 1.00000 1.0000e+00 insignificant -0.061774 2.7719e-01 lowCoverage 1.00000000 lowCoverage chr3 49412350 49413350 12112 ENSG00000197582 0.787338 125 5 0.634520 114 5 0.655556 43 5 0.7128683 135 5 0.760317 41 5 0.59996 173 5 0.801894 58 5 0.666912 98 5 0.800233 53 4 0.697576 56 5 0.689832 151 5 0.6538462 21 1 0.69802 76 5 0.485119 37 5 0.716287 69 5 0.6965812 21 1 0.746032 20 1 0.7111111 70 5 0.646242 108 5 0.713737 115 5 0.462500 12 1 0.812500 25 2 0.786734 108 5 0.6246753 46 5 0.833333 12 1 0.7409769 138 5 0.66468 34 2 0.798077 21 2 0.654596 92 5 0.58384 135 5 0.520219 112 5 0.714193 160 5 0.4721726 77 5 0.460397 58 5 0.497475 75 5 0.500000 9 1 0.576854 65 5 0.6809945 161 5 0.764037 123 5 0.668456 138 5 0.6874020 100 5 0.687536 86 5 0.655938 141 5 0.88050 0.669805 0.673593 0.820132 0.814038 0.765396 0.774577 0.813932 0.785669 0.853325 0.777162 0.790709 0.762008 0.841373 0.777426 0.8344988 0.665224 0.814574 0.842373 0.795294 0.646135 0.765250 0.749456 0.735402 0.764384 0.768498 0.821486 0.799997 0.789600 0.811739 0.752693 0.732069 0.7289734 0.5775871 0.674144 0.6728725 0.663052 0.697759 0.851911 0.771789 0.8208015 0.718420 0.842520 1 0.735480 0.724022 -0.00025868 5 0.74699 0.702572 0.04441543 0.366614 0.7165945 insignificant 1 1 insignificant 0.7086332 0.813555 insignificant 1 1 insignificant 0.01067139 0.783628 lowCoverage 1 lowCoverage 0.734940 0.617978 0.1080027 5 0.734748 0.530138 0.20460975 5.7527e-06 9.9999e-01 weaklyHypermeth 1.4031e-04 1.0000000 weaklyHypermeth 1.8440e-03 9.9998e-01 weaklyHypermeth 4.8527e-02 1.0000000 weaklyHypermeth 0.1623835 3.1610e-03 lowCoverage 0.13171018 lowCoverage 0.734940 0.778912 -0.03074546 5 0.734748 0.69847 0.0362781 0.9783388 4.8800e-01 insignificant 1.00000 1.000000 insignificant 0.9891490 6.5993e-01 insignificant 1.00000 1.0000000 insignificant 0.00102512 9.6799e-01 lowCoverage 1.0000000 lowCoverage 0.72391 0.617978 0.109187 5 0.697302 0.530138 0.1671640 6.3519e-04 9.9126e-01 weaklyHypermeth 1.2215e-02 1.000000 weaklyHypermeth 1.3727e-02 0.9950211 weaklyHypermeth 2.6916e-01 1.00000 insignificant 0.1517121 7.5933e-03 lowCoverage 0.23010005 lowCoverage 0.723906 0.778912 -0.0318639 5 0.697302 0.69847 -0.0011676 0.99461146 3.6976e-01 insignificant 1.0000000 1.000000 insignificant 0.9888188 0.6415776 insignificant 1.00000 1 insignificant -0.0096463 0.8094917 lowCoverage 1.00000 lowCoverage 0.617978 0.778912 -0.1413601 5 0.530138 0.698470 -0.1683316 0.99969931 2.0509e-03 weaklyHypometh 1.000000 4.3636e-02 weaklyHypometh 0.99998268 2.7501e-02 weaklyHypometh 1.00000 4.9937e-01 insignificant -0.161358 3.6651e-03 lowCoverage 0.19115383 lowCoverage chr3 49474350 49475350 12117 NICN1 ENSG00000145029 0.839864 235 6 0.815446 53 6 0.736508 82 6 0.8517949 121 6 0.908333 36 2 0.84777 175 6 0.686243 79 5 0.704365 49 4 0.827020 60 6 0.889881 39 5 0.771368 111 6 0.8897176 79 6 0.91481 60 5 NA 0 0 0.812282 116 6 0.8616441 75 6 0.836490 37 3 0.8273887 142 6 0.874074 59 6 0.887262 155 6 0.716667 16 2 0.897619 45 4 0.772095 123 6 0.9444444 15 2 0.910714 29 2 0.7701506 131 6 0.86162 54 4 0.952381 21 2 0.756618 58 5 0.73070 125 6 0.765777 100 6 0.836196 227 6 0.8465608 59 5 0.636854 59 6 0.784981 115 6 0.915064 61 6 0.733761 44 3 0.9058123 101 6 0.870623 221 6 0.903627 248 6 0.9007714 195 6 0.870097 230 6 0.879060 159 6 0.85563 0.805651 0.729492 0.853717 0.891597 0.856774 0.719835 0.741096 0.837662 0.883103 0.791740 0.887531 0.921942 NA 0.802868 0.8808119 0.862077 0.800948 0.875070 0.886878 0.800840 0.886074 0.793941 0.913165 0.901561 0.802324 0.862524 0.930372 0.788005 0.750189 0.810374 0.833673 0.8041216 0.6441654 0.779676 0.8881707 0.769015 0.885284 0.883929 0.916682 0.8986759 0.876120 0.886411 2 0.834373 0.819915 0.02173200 6 0.83198 0.802014 0.02996512 0.032509 0.8084294 weaklyHypermeth 1 1 insignificant 0.8070327 0.379519 insignificant 1 1 insignificant 0.00439645 0.879906 lowCoverage 1 lowCoverage 0.834373 0.804100 0.0311816 6 0.831979 0.811125 0.02085419 7.5704e-02 7.9557e-01 insignificant 7.8046e-01 1.0000000 insignificant 1.5388e-01 8.6990e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0268069 5.8346e-01 insignificant 1.00000000 insignificant 0.834373 0.885090 -0.05450780 6 0.831979 0.88575 -0.0537678 0.9997288 9.9979e-03 weaklyHypometh 1.00000 0.532883 insignificant 0.9987463 1.1928e-02 weaklyHypometh 1.00000 0.7016355 insignificant -0.05418997 3.6495e-03 weaklyHypometh 0.1737875 insignificant 0.81992 0.804100 0.018065 6 0.802014 0.811125 -0.0091109 1.3956e-01 4.6307e-01 insignificant 1.0000e+00 1.000000 insignificant 8.1819e-02 0.9077760 insignificant 1.0000e+00 1.00000 insignificant 0.0224104 6.6708e-01 lowCoverage 1.00000000 lowCoverage 0.819915 0.885090 -0.0743388 6 0.802014 0.88575 -0.0837329 0.99989223 8.4091e-04 weaklyHypometh 1.0000000 0.210228 insignificant 0.9601459 0.1848255 insignificant 1.00000 1 insignificant -0.0585864 0.0395216 lowCoverage 1.00000 lowCoverage 0.804100 0.885090 -0.0918516 6 0.811125 0.885747 -0.0746219 0.99180224 2.7195e-03 weaklyHypometh 1.000000 5.4390e-02 weaklyHypometh 0.97024331 2.7965e-02 weaklyHypometh 1.00000 4.9937e-01 insignificant -0.080997 1.2516e-01 insignificant 1.00000000 insignificant chr3 50181550 50182550 12132 SEMA3F ENSG00000001617 0.954831 301 7 0.828900 159 4 0.908660 140 7 0.9257474 310 7 0.932569 120 7 0.93870 321 7 0.896140 191 7 0.898827 137 7 0.953811 73 4 0.981366 67 4 0.879528 226 7 0.9166667 52 4 0.87619 62 4 0.861517 96 4 0.805686 122 4 0.7448980 40 4 NA 0 0 0.9337984 481 4 0.920167 177 4 0.936927 261 7 0.915520 97 4 0.945462 63 2 0.936571 152 7 1.0000000 63 4 0.957734 269 7 0.9636603 211 7 0.84402 124 7 0.938776 71 4 0.950236 148 4 0.92326 224 7 0.921387 196 7 0.910468 281 7 0.6501832 140 7 0.407757 196 7 0.830189 459 7 0.526786 64 5 0.644734 135 5 0.8674071 213 7 0.856412 234 4 0.940452 228 7 0.9033440 266 7 0.853112 303 4 0.908089 205 7 0.91171 0.771058 0.837904 0.914982 0.851852 0.879489 0.873798 0.889658 0.917277 0.961039 0.861841 0.964286 0.900299 0.879757 0.902818 0.9217687 NA 0.885965 0.873046 0.907671 0.835136 0.885966 0.880843 1.000000 0.955955 0.931949 0.789455 0.871985 0.914501 0.906514 0.888623 0.856022 0.5721871 0.3829419 0.671077 0.2356602 0.589177 0.840648 0.858626 0.902574 0.8477876 0.881287 0.885158 4 0.883993 0.902529 -0.01340120 5 0.92285 0.936425 -0.01357435 0.977013 0.2355704 insignificant 1 1 insignificant 0.9102496 0.127468 insignificant 1 1 insignificant -0.03419098 0.054603 insignificant 1 insignificant 0.883958 0.652858 0.2621212 5 0.911829 0.736047 0.17578214 7.9787e-10 9.7220e-01 hypermethylated 2.7513e-08 1.0000000 hypermethylated 2.4670e-05 9.9385e-01 hypermethylated 1.1748e-03 1.0000000 hypermethylated 0.2452239 1.7928e-02 weaklyHypermeth 0.47851408 insignificant 0.883958 0.878641 0.00012854 5 0.911829 0.91313 -0.0013008 0.2863139 3.3418e-01 insignificant 1.00000 1.000000 insignificant 0.5148863 5.8206e-01 insignificant 1.00000 1.0000000 insignificant 0.00745147 7.3274e-01 insignificant 1.0000000 insignificant 0.90248 0.652858 0.247257 7 0.927343 0.736047 0.1912957 2.0150e-07 9.4151e-01 hypermethylated 6.9484e-06 1.000000 hypermethylated 2.1754e-05 0.9990930 hypermethylated 1.6734e-03 1.00000 hypermethylated 0.2794148 1.0870e-02 weaklyHypermeth 0.29377730 insignificant 0.902478 0.878641 0.0138093 7 0.927343 0.91313 0.0142128 0.04332056 3.0774e-01 weaklyHypermeth 1.0000000 1.000000 insignificant 0.0957009 0.6547794 insignificant 1.00000 1 insignificant 0.0416424 0.0705650 insignificant 1.00000 insignificant 0.652858 0.878641 -0.2581977 7 0.736047 0.913130 -0.1770829 0.99770751 2.8881e-03 weaklyHypometh 1.000000 5.6630e-02 weaklyHypometh 0.99992049 7.2799e-03 weaklyHypometh 1.00000 1.7756e-01 insignificant -0.237772 1.9895e-02 weaklyHypometh 0.54778014 insignificant chr3 52225950 52226950 12158 ALAS1 ENSG00000023330 0.671761 154 6 0.605400 115 6 0.744372 111 6 0.8946886 106 5 0.776587 63 6 0.77937 151 6 0.904762 59 6 0.833812 134 7 0.755602 55 3 0.849190 58 4 0.702978 230 7 0.8129274 36 4 0.62258 127 6 0.666667 12 2 0.800000 68 6 0.9100000 12 1 0.695833 29 3 0.6715272 143 8 0.929660 120 6 0.854096 122 6 0.777778 31 3 0.812500 14 1 0.781192 108 6 0.7832792 58 5 0.830065 50 4 0.7670210 116 7 0.77755 61 5 0.609524 23 3 0.774939 75 6 0.69770 120 6 0.862009 133 7 0.741196 150 6 0.7067178 122 6 0.864035 72 6 0.743333 59 3 0.694444 17 0 0.616547 84 6 0.5689123 170 6 0.828912 86 6 0.904647 148 7 0.7382201 87 5 0.789250 89 6 0.722024 101 7 0.86566 0.741291 0.739954 0.923340 0.882453 0.904005 0.934932 0.775618 0.779680 0.958072 0.842796 0.752283 0.761661 0.830498 0.864155 0.9223065 0.717095 0.888027 0.917057 0.832250 1.000000 0.840150 0.830794 0.889344 0.884233 0.803047 0.766036 0.725114 0.773224 0.880629 0.877469 0.866152 0.6595285 0.8487143 0.886696 0.7465753 0.774772 0.684800 0.862981 0.917252 0.8468119 0.826472 0.736880 1 0.805774 0.827476 -0.01183889 6 0.60277 0.576184 0.02658113 0.955106 0.7562540 insignificant 1 1 insignificant 0.8951567 0.850088 insignificant 1 1 insignificant 0.00619431 0.832721 lowCoverage 1 lowCoverage 0.809926 0.715649 0.0971121 6 0.711790 0.609051 0.10273889 1.9240e-04 9.9999e-01 weaklyHypermeth 3.9265e-03 1.0000000 weaklyHypermeth 2.0246e-01 9.9681e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0750925 1.5291e-01 lowCoverage 1.00000000 lowCoverage 0.809926 0.814090 -0.01618729 6 0.711790 0.72194 -0.0101526 0.9632789 4.7698e-01 insignificant 1.00000 1.000000 insignificant 0.6983688 8.2664e-01 insignificant 1.00000 1.0000000 insignificant -0.02251954 5.8668e-01 insignificant 1.0000000 insignificant 0.83102 0.715649 0.115724 6 0.720230 0.609051 0.1111791 7.3254e-04 1.0000e+00 weaklyHypermeth 1.3566e-02 1.000000 weaklyHypermeth 1.1161e-01 0.9942676 insignificant 1.0000e+00 1.00000 insignificant 0.0688982 1.7758e-01 lowCoverage 1.00000000 lowCoverage 0.831016 0.814090 -0.0044728 6 0.720230 0.72194 -0.0017124 0.84030098 6.6001e-01 insignificant 1.0000000 1.000000 insignificant 0.5548449 0.9729964 insignificant 1.00000 1 insignificant -0.0287139 0.4743415 lowCoverage 1.00000 lowCoverage 0.715649 0.814090 -0.1143140 6 0.609051 0.721942 -0.1128915 0.99965110 5.0905e-03 weaklyHypometh 1.000000 8.7767e-02 weaklyHypometh 0.95644005 3.3454e-01 insignificant 1.00000 1.0000e+00 insignificant -0.097612 1.0149e-01 lowCoverage 1.00000000 lowCoverage chr3 53246650 53247650 12182 ENSG00000222060 0.885017 153 4 0.860009 209 6 0.845207 57 6 0.8828295 83 6 0.923529 55 6 0.73271 127 4 0.863666 128 6 0.877778 49 4 0.751389 38 6 0.905724 48 4 0.875299 231 6 0.6666667 36 4 0.79107 61 4 0.722222 29 4 0.877778 65 4 0.8750000 20 0 0.893708 2140 4 0.7361111 47 4 0.845238 26 4 0.888889 151 4 0.778571 25 3 0.500000 2 0 0.738961 45 4 0.8078231 27 2 0.753127 116 6 0.8143613 161 6 0.83478 43 4 0.928571 17 0 0.888889 29 4 0.89098 182 6 0.912287 212 6 0.888687 114 6 0.7542735 62 6 0.604902 88 6 0.845916 116 6 0.416667 28 2 0.749729 82 6 0.8050334 110 6 0.933333 181 6 0.827991 179 6 0.8512344 222 6 0.875000 88 4 0.901218 168 6 0.81797 0.801281 0.863755 0.837123 0.888235 0.723537 0.816992 0.866667 0.674167 0.847811 0.818475 0.818161 0.675754 0.685185 0.802222 0.8138889 0.892074 0.704630 0.853964 0.828395 0.719444 0.769310 0.782727 0.656481 0.673037 0.747635 0.746465 0.861111 0.822222 0.834243 0.867092 0.866125 0.7004274 0.6154902 0.721662 0.3722222 0.681244 0.759639 0.895556 0.805912 0.8263142 0.865121 0.889403 0 0.869670 0.844720 0.04200753 6 0.88655 0.851692 0.03485525 0.058414 0.7012803 insignificant 1 1 insignificant 0.5194774 0.316712 insignificant 1 1 insignificant 0.02357247 0.537801 lowCoverage 1 lowCoverage 0.869670 0.719588 0.1612004 6 0.886547 0.728399 0.15814825 1.2244e-10 9.9432e-01 weaklyHypermeth 4.8976e-09 1.0000000 weaklyHypermeth 1.0704e-05 9.9986e-01 weaklyHypermeth 5.6337e-04 1.0000000 weaklyHypermeth 0.1389051 8.6751e-02 lowCoverage 1.00000000 lowCoverage 0.869670 0.867542 0.00274080 6 0.886547 0.87616 0.0103905 0.5480387 1.9380e-01 insignificant 1.00000 1.000000 insignificant 0.6114229 2.0054e-01 insignificant 1.00000 1.0000000 insignificant -0.04276351 1.1088e-01 lowCoverage 1.0000000 lowCoverage 0.84378 0.720165 0.119178 6 0.832063 0.767199 0.0648634 1.3623e-04 9.6798e-01 weaklyHypermeth 3.0273e-03 1.000000 weaklyHypermeth 2.2846e-04 0.9905116 weaklyHypermeth 9.5192e-03 1.00000 weaklyHypermeth 0.1153327 1.5505e-01 lowCoverage 1.00000000 lowCoverage 0.844720 0.867542 -0.0300435 6 0.851692 0.87616 -0.0244647 0.43928932 1.5755e-01 insignificant 1.0000000 1.000000 insignificant 0.5207142 0.1038877 insignificant 1.00000 1 insignificant -0.0663360 0.1046443 lowCoverage 1.00000 lowCoverage 0.719588 0.867542 -0.1546603 6 0.728399 0.876157 -0.1477577 0.94957091 5.8682e-06 weaklyHypometh 1.000000 3.0885e-04 weaklyHypometh 0.97713289 5.7119e-06 weaklyHypometh 1.00000 9.5199e-04 weaklyHypometh -0.181669 3.7514e-02 weaklyHypometh 0.83365544 insignificant chr3 53252650 53253650 12184 ENSG00000222060 0.885763 234 9 0.778579 205 9 0.673621 196 8 0.8750658 211 9 0.853889 99 7 0.81475 240 9 0.856587 178 8 0.826476 161 9 0.842298 175 8 0.807485 134 7 0.790130 261 9 0.7811869 83 6 0.83499 138 6 0.892398 37 2 0.911409 120 6 0.8557692 81 6 0.749167 86 5 0.9359554 174 8 0.707545 134 8 0.891321 225 9 0.810497 97 8 0.947569 95 6 0.911666 182 8 0.9156873 134 6 0.841424 218 5 0.8421940 233 9 0.87340 129 7 0.891667 74 3 0.829106 131 9 0.89367 277 9 0.863638 236 9 0.907623 335 9 0.8743519 185 9 0.987923 176 9 0.993260 294 9 0.861111 64 6 0.849206 167 9 0.9303836 232 9 0.827468 173 9 0.852465 192 9 0.6892272 153 7 0.874169 126 8 0.919838 164 9 0.87354 0.798317 0.683041 0.832473 0.828473 0.901102 0.764035 0.812671 0.818569 0.865357 0.833197 0.745729 0.840122 0.824626 0.878020 0.8810767 0.797059 0.894695 0.745916 0.907061 0.736308 0.863575 0.901541 0.896860 0.877378 0.858534 0.848682 0.889331 0.827359 0.879028 0.843553 0.897893 0.8625562 0.9622521 0.985863 0.8922594 0.864865 0.914984 0.740353 0.801939 0.5885715 0.814781 0.870608 5 0.834544 0.861682 -0.02770349 9 0.86305 0.882369 -0.01932144 0.887843 0.0196348 weaklyHypometh 1 1 insignificant 0.9910959 0.018231 weaklyHypometh 1 1 insignificant -0.04912544 0.015535 weaklyHypometh 1 insignificant 0.834491 0.924866 -0.0896608 9 0.847831 0.930980 -0.08314891 1.0000e+00 3.8116e-06 weaklyHypometh 1.0000e+00 0.0019058 weaklyHypometh 9.9999e-01 1.7084e-05 weaklyHypometh 1.0000e+00 0.0085421 weaklyHypometh -0.0878199 1.8184e-02 weaklyHypometh 0.47851408 insignificant 0.834491 0.800743 0.03854587 9 0.847831 0.84247 0.0053592 0.0906252 3.2702e-01 insignificant 1.00000 1.000000 insignificant 0.1306623 4.3137e-01 insignificant 1.00000 1.0000000 insignificant -0.00441394 9.1970e-01 insignificant 1.0000000 insignificant 0.86162 0.924866 -0.060237 9 0.869299 0.930980 -0.0616806 9.9993e-01 6.5196e-05 weaklyHypometh 1.0000e+00 0.021732 weaklyHypometh 9.9979e-01 0.0025738 weaklyHypometh 1.0000e+00 0.85793 insignificant -0.0386944 2.1932e-01 insignificant 1.00000000 insignificant 0.861618 0.800743 0.0659901 9 0.869299 0.84247 0.0268275 0.00632541 6.7099e-02 weaklyHypermeth 0.3012102 1.000000 insignificant 0.0022727 0.4872160 weaklyHypermeth 0.20772 1 insignificant 0.0447115 0.3243219 insignificant 1.00000 insignificant 0.924866 0.800743 0.1182865 9 0.930980 0.842472 0.0885082 0.00011895 9.9897e-01 weaklyHypermeth 0.059473 1.0000e+00 weaklyHypermeth 0.00026990 9.9985e-01 weaklyHypermeth 0.13495 1.0000e+00 insignificant 0.083406 1.1721e-01 insignificant 1.00000000 insignificant chr3 53268650 53269650 12187 TKT ENSG00000163931 0.862031 136 6 0.868942 145 6 0.843182 50 5 0.5592809 145 5 0.666667 20 3 0.76591 155 6 0.816667 21 2 0.663878 73 4 0.883387 32 3 0.922123 43 3 0.842012 203 5 0.5277778 14 0 0.86894 62 4 0.395833 19 1 0.866667 29 3 0.6875000 9 0 1.000000 5 0 0.8406201 129 5 0.761310 76 5 0.894805 126 6 0.833333 48 3 0.744246 53 4 0.788420 56 4 0.7023810 73 5 0.872068 76 6 0.7805521 197 6 0.74759 66 4 0.663636 28 3 0.747687 70 5 0.72229 187 6 0.822684 222 5 0.864194 233 6 0.8304473 120 6 0.909722 72 5 0.904255 126 3 0.893985 61 4 0.900000 59 5 0.7479965 187 5 0.795635 65 5 0.780219 140 5 0.7269592 111 5 0.719567 46 3 0.530556 107 5 0.93734 0.911249 0.962392 0.761077 1.000000 0.876667 0.790208 0.887248 0.847828 0.954082 0.858414 0.706349 0.831241 0.622238 0.820635 0.8779762 1.000000 0.878517 0.811431 0.889657 0.940476 0.863322 0.916048 0.934524 0.931790 0.854356 0.778004 0.787879 0.803623 0.817172 0.875227 0.946439 0.8990930 0.9573413 0.881459 0.9230159 1.000000 0.915545 0.766298 0.863243 0.8657216 0.687879 0.784199 2 0.810992 0.802903 0.00775420 5 0.80161 0.791201 0.01040819 0.428365 0.6595216 insignificant 1 1 insignificant 0.2840398 0.844428 insignificant 1 1 insignificant 0.00278659 0.942824 lowCoverage 1 lowCoverage 0.810992 0.851200 -0.0401805 5 0.801609 0.833602 -0.03199346 7.0371e-01 5.0348e-03 weaklyHypometh 1.0000e+00 0.7096704 insignificant 9.8233e-01 5.2945e-03 weaklyHypometh 1.0000e+00 1.0000000 insignificant -0.0875245 5.2958e-02 lowCoverage 0.99921370 lowCoverage 0.810992 0.729211 0.08322394 5 0.801609 0.69824 0.1033689 0.0084965 9.9758e-01 weaklyHypermeth 0.42482 1.000000 insignificant 0.0611510 9.4016e-01 insignificant 1.00000 1.0000000 insignificant 0.06628938 2.8462e-01 lowCoverage 1.0000000 lowCoverage 0.80290 0.851200 -0.048225 5 0.791201 0.833602 -0.0424016 6.7306e-01 4.0175e-05 weaklyHypometh 1.0000e+00 0.020087 weaklyHypometh 9.9676e-01 0.0016928 weaklyHypometh 1.0000e+00 0.84642 insignificant -0.0903111 1.8109e-02 lowCoverage 0.44168346 lowCoverage 0.802903 0.729211 0.0804722 5 0.791201 0.69824 0.0929607 0.00464516 9.8931e-01 weaklyHypermeth 0.2322582 1.000000 insignificant 0.0757696 0.9006980 insignificant 1.00000 1 insignificant 0.0635028 0.2645619 lowCoverage 1.00000 lowCoverage 0.851200 0.729211 0.1241176 5 0.833602 0.698240 0.1353623 0.00018661 9.8407e-01 weaklyHypermeth 0.062202 1.0000e+00 weaklyHypermeth 0.00126538 9.9873e-01 weaklyHypermeth 0.42179 1.0000e+00 insignificant 0.153814 2.7704e-02 lowCoverage 0.69259485 lowCoverage chr3 53360550 53361550 12191 DCP1A ENSG00000162290 0.723422 131 4 0.718182 113 6 0.691667 39 6 0.6807674 136 6 0.857966 67 4 0.87500 53 6 0.659246 69 5 0.670455 63 6 0.673763 60 6 0.904762 32 4 0.740302 155 6 0.6488095 29 4 0.72054 72 6 0.781145 50 6 0.783598 44 6 0.9444444 24 3 1.000000 2 0 0.7258162 175 8 0.710979 54 6 0.708333 36 4 0.761905 17 0 0.750000 15 0 0.704563 85 6 0.5912698 44 6 0.735042 57 5 0.7052696 69 5 0.76603 40 4 0.870370 32 3 0.701042 78 4 0.69930 54 6 0.712734 73 6 0.736111 64 6 0.6254630 61 6 0.766740 62 5 0.720437 63 6 0.600000 14 0 0.658051 64 6 0.6865313 82 6 0.705913 96 5 0.818010 154 6 0.8038438 142 5 0.917854 84 3 0.719925 99 6 0.73855 0.720303 0.703268 0.724354 0.800974 0.894608 0.698958 0.659091 0.686527 0.864146 0.750700 0.644958 0.772211 0.755041 0.798631 0.9673203 NA 0.693797 0.750156 0.732843 0.738562 0.707742 0.738352 0.681917 0.751283 0.713884 0.825603 0.807190 0.625953 0.713641 0.751655 0.796569 0.6264978 0.6624160 0.720005 0.6506408 0.693200 0.738809 0.829515 0.828451 0.8011561 0.830187 0.764988 1 0.740634 0.725962 0.01508765 6 0.73389 0.717938 0.01595013 0.385732 0.7462298 insignificant 1 1 insignificant 0.5746566 0.608201 insignificant 1 1 insignificant 0.03315676 0.266731 lowCoverage 1 lowCoverage 0.743590 0.670520 0.0639621 6 0.800416 0.752626 0.04779003 2.3215e-02 9.9960e-01 weaklyHypermeth 2.8311e-01 1.0000000 insignificant 1.1395e-01 9.9990e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0847561 2.5429e-02 lowCoverage 0.60201387 lowCoverage 0.743590 0.793043 -0.04761273 5 0.800416 0.77513 0.0252819 0.9836016 8.2129e-02 insignificant 1.00000 1.000000 insignificant 0.9957718 1.0650e-01 insignificant 1.00000 1.0000000 insignificant -0.03214958 4.9297e-01 insignificant 1.0000000 insignificant 0.72596 0.668605 0.050368 6 0.717938 0.670168 0.0477699 1.3648e-02 8.5725e-01 weaklyHypermeth 1.9780e-01 1.000000 insignificant 4.2267e-02 0.9463092 weaklyHypermeth 6.2158e-01 1.00000 insignificant 0.0515993 1.2780e-01 lowCoverage 1.00000000 lowCoverage 0.725962 0.793706 -0.0627990 5 0.717938 0.78351 -0.0655743 0.99706467 4.4270e-02 weaklyHypometh 1.0000000 1.000000 insignificant 0.9960699 0.0375445 weaklyHypometh 1.00000 1 insignificant -0.0653063 0.1753349 lowCoverage 1.00000 lowCoverage 0.670520 0.793043 -0.1019171 5 0.752626 0.775134 -0.0225081 0.99678068 3.3473e-03 weaklyHypometh 1.000000 6.1987e-02 weaklyHypometh 0.99972798 2.6674e-02 weaklyHypometh 1.00000 4.9397e-01 insignificant -0.116906 3.7264e-02 lowCoverage 0.83365544 lowCoverage chr3 55606150 55607150 12271 WNT5A ENSG00000114251 0.859341 157 6 0.818903 83 5 0.605000 39 5 0.7578239 199 8 0.706667 30 5 0.67657 179 6 0.861833 39 5 0.837223 92 5 0.688889 33 5 0.840278 33 5 0.866567 160 5 0.6200000 23 4 0.87153 51 5 0.714286 45 5 0.692857 43 5 0.7200000 21 1 0.625000 15 0 0.8247831 175 6 0.608866 72 5 0.832575 119 6 0.925000 34 5 0.807937 52 5 0.530094 116 6 0.7154046 50 5 0.816667 30 4 0.7573099 112 5 0.90741 28 1 0.944444 19 1 0.708690 63 5 0.80994 99 5 0.830387 118 5 0.752130 213 6 0.7336752 61 5 0.607853 63 5 0.713294 84 5 0.933333 16 0 0.752976 47 5 0.8720445 99 5 0.853024 139 6 0.736352 144 6 0.8837691 131 6 0.819940 87 6 0.872271 138 8 0.85724 0.735190 0.616216 0.838338 0.745045 0.772995 0.847022 0.812239 0.721221 0.813814 0.786680 0.667568 0.815566 0.776062 0.714607 0.7067568 0.810811 0.869616 0.750144 0.883277 0.875676 0.838553 0.768321 0.807492 0.791892 0.774406 0.872873 0.951952 0.737159 0.827117 0.761575 0.789742 0.7340571 0.7876299 0.663664 0.9369369 0.712838 0.882219 0.825431 0.863917 0.8580750 0.812098 0.853127 1 0.790333 0.775161 0.02266535 5 0.77465 0.649685 0.12496493 0.051577 0.9462088 insignificant 1 1 insignificant 0.5877090 0.738019 insignificant 1 1 insignificant -0.04066855 0.310849 lowCoverage 1 lowCoverage 0.797366 0.772973 0.0234720 5 0.815749 0.648782 0.16696650 1.0839e-01 9.6894e-01 insignificant 1.0000e+00 1.0000000 insignificant 5.4921e-01 9.5912e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0174132 7.4872e-01 lowCoverage 1.00000000 lowCoverage 0.791045 0.807512 -0.03582286 6 0.786434 0.86935 -0.0829114 0.9630454 3.6094e-01 insignificant 1.00000 1.000000 insignificant 0.9997184 3.0460e-01 insignificant 1.00000 1.0000000 insignificant -0.08162195 3.7600e-02 lowCoverage 1.0000000 lowCoverage 0.78894 0.772973 0.011792 5 0.805860 0.648782 0.1570774 5.7330e-01 7.8199e-01 insignificant 1.0000e+00 1.000000 insignificant 2.3549e-01 0.9877960 insignificant 1.0000e+00 1.00000 insignificant 0.0232553 6.9611e-01 lowCoverage 1.00000000 lowCoverage 0.775161 0.800325 -0.0701124 5 0.649685 0.84757 -0.1978853 0.99973970 2.7619e-02 weaklyHypometh 1.0000000 1.000000 insignificant 0.9999603 0.2488128 insignificant 1.00000 1 insignificant -0.0409534 0.3471517 lowCoverage 1.00000 lowCoverage 0.772973 0.845161 -0.0789262 5 0.648782 0.908382 -0.2595996 0.99994060 1.5285e-01 insignificant 1.000000 1.0000e+00 insignificant 0.99998328 3.9079e-01 insignificant 1.00000 1.0000e+00 insignificant -0.064209 2.7443e-01 lowCoverage 1.00000000 lowCoverage chr3 57631250 57632250 12319 ENSG00000210841 0.871002 173 6 0.825580 103 6 0.734603 92 6 0.8082341 103 4 0.667749 74 6 0.66998 294 6 0.832097 100 6 0.778147 115 6 0.659268 81 6 0.761138 81 6 0.745640 234 6 0.6087963 63 6 0.74036 126 6 0.933333 26 3 0.810417 120 6 0.7967172 52 2 0.856611 51 4 0.9334759 112 4 0.761628 129 6 0.866516 246 6 0.801937 63 3 0.776575 69 4 0.898912 143 4 0.7368585 98 6 0.819444 45 4 0.8198316 148 6 0.60224 102 6 0.925746 64 6 0.858333 90 4 0.87952 172 6 0.821166 173 6 0.705392 402 6 0.7299157 114 6 0.784061 72 6 0.589290 183 6 0.680254 49 2 0.777336 114 6 0.7078095 140 6 0.856738 162 6 0.931870 194 5 0.9171746 181 4 0.855218 143 4 0.918446 168 6 0.88470 0.815117 0.826770 0.867724 0.783016 0.870156 0.818668 0.779011 0.745729 0.771417 0.819229 0.639341 0.831959 0.889542 0.867926 0.8477449 0.785226 0.940021 0.909985 0.860634 0.801804 0.789943 0.858781 0.790774 0.806977 0.781154 0.793909 0.922182 0.833430 0.862464 0.859001 0.849517 0.8265327 0.8090532 0.559634 0.7955258 0.788918 0.741551 0.888234 0.928550 0.8974318 0.887661 0.938632 4 0.833263 0.836201 -0.00229726 6 0.75602 0.765194 -0.00917752 0.329161 0.2343479 insignificant 1 1 insignificant 0.4331325 0.459783 insignificant 1 1 insignificant -0.02076484 0.531274 insignificant 1 insignificant 0.835100 0.727679 0.1071532 6 0.807521 0.650686 0.15683453 4.1871e-06 9.8378e-01 weaklyHypermeth 1.0468e-04 1.0000000 weaklyHypermeth 9.1644e-03 6.7447e-01 weaklyHypermeth 1.7624e-01 1.0000000 insignificant 0.0716201 7.0669e-02 insignificant 1.00000000 insignificant 0.833616 0.918632 -0.06916327 6 0.741896 0.90953 -0.1676352 0.9999956 1.7510e-03 weaklyHypometh 1.00000 0.224290 insignificant 0.9999981 5.5191e-04 weaklyHypometh 1.00000 0.1103815 insignificant -0.11282489 4.3511e-04 weaklyHypometh 0.0483455 weaklyHypometh 0.83643 0.727679 0.109950 6 0.784618 0.650686 0.1339314 5.7202e-06 8.2475e-01 weaklyHypermeth 1.5053e-04 1.000000 weaklyHypermeth 6.4973e-03 0.7791802 weaklyHypermeth 1.3536e-01 1.00000 insignificant 0.0923850 3.5582e-02 weaklyHypermeth 0.71163874 insignificant 0.837061 0.918632 -0.0697119 6 0.789826 0.90953 -0.1197049 0.99845995 1.4089e-03 weaklyHypometh 1.0000000 0.281786 insignificant 0.9998940 0.0035434 weaklyHypometh 1.00000 1 insignificant -0.0920601 0.0091218 weaklyHypometh 0.59055 insignificant 0.728358 0.918246 -0.1713273 6 0.700915 0.879375 -0.1784596 0.99996282 2.0022e-06 weaklyHypometh 1.000000 1.2514e-04 weaklyHypometh 0.99710171 5.8030e-04 weaklyHypometh 1.00000 3.6269e-02 weaklyHypometh -0.184445 6.7364e-04 weaklyHypometh 0.05181827 weaklyHypometh chr3 57942650 57943650 12337 ENSG00000213509 0.565000 64 5 0.411111 50 3 0.485714 17 2 0.5346032 70 5 0.446364 45 4 0.47669 48 3 0.316429 34 5 0.600000 39 3 0.646825 24 2 0.736111 16 0 0.521429 89 5 0.6600000 23 2 0.54000 23 3 0.472222 26 2 0.470000 25 2 0.8126984 28 3 0.127660 95 2 0.3733333 37 4 0.416667 10 0 0.466667 22 3 0.666667 10 0 0.533333 10 0 0.772309 50 3 0.4857143 26 4 0.821429 18 2 0.6666855 54 3 0.41667 27 2 0.527778 9 0 0.657778 43 3 0.67000 35 2 0.867460 44 2 0.488889 29 3 0.5000000 38 3 0.383333 29 4 0.503526 44 4 0.541667 7 0 0.384790 46 4 0.6944444 22 2 0.577143 42 5 0.626984 58 5 0.6439542 76 5 0.620000 65 2 0.620000 80 5 0.67989 0.596708 0.740741 0.669900 0.580808 0.724032 0.385582 0.629630 0.751029 0.891975 0.655732 0.937037 0.748148 0.753086 0.648148 0.9218107 0.695654 0.439506 0.785649 0.709877 0.572355 0.802469 0.808694 0.622997 0.790609 0.742539 0.370370 0.617284 0.920165 0.768519 0.795459 0.720165 0.6604938 0.5030864 0.642331 0.5529602 0.601399 0.642747 0.683598 0.856849 0.7804708 0.762963 0.692593 0 0.483418 0.625352 -0.06775313 2 0.63378 0.736727 -0.10294397 0.996171 0.1424902 lowCoverage 1 1 lowCoverage 0.9968556 0.562784 lowCoverage 1 1 lowCoverage -0.12724950 0.024736 lowCoverage 1 lowCoverage 0.481434 0.559140 0.0552307 3 0.540033 0.416796 0.12323708 2.9050e-01 9.9391e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 1.7932e-01 9.9769e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 0.0026828 9.6383e-01 lowCoverage 1.00000000 lowCoverage 0.480000 0.560748 -0.10204094 5 0.514053 0.61226 -0.0982024 0.9580611 9.0696e-03 weaklyHypometh 1.00000 0.532883 insignificant 0.9182023 4.4670e-02 weaklyHypometh 1.00000 1.0000000 insignificant -0.11364002 3.9376e-03 lowCoverage 0.1789839 lowCoverage 0.62323 0.565217 0.112075 2 0.699117 0.476338 0.2227783 4.7730e-02 1.0000e+00 lowCoverage 5.2450e-01 1.000000 lowCoverage 6.3954e-02 0.9999729 lowCoverage 8.7608e-01 1.00000 lowCoverage 0.1299323 5.9363e-02 lowCoverage 1.00000000 lowCoverage 0.621083 0.560748 -0.0292361 2 0.578764 0.61226 -0.0334921 0.63295982 5.2953e-01 lowCoverage 1.0000000 1.000000 lowCoverage 0.7412464 0.6846899 lowCoverage 1.00000 1 lowCoverage 0.0136095 0.7550876 lowCoverage 1.00000 lowCoverage 0.565934 0.560748 -0.1346840 3 0.466874 0.612256 -0.1453818 0.99999823 6.6018e-04 lowCoverage 1.000000 1.6505e-02 lowCoverage 0.99999996 1.3901e-03 lowCoverage 1.00000 5.5604e-02 lowCoverage -0.116323 5.6206e-02 lowCoverage 1.00000000 lowCoverage chr3 58044350 58045350 12365 ENSG00000197750 0.946151 124 5 0.737450 103 5 0.772436 91 5 0.9556689 109 5 0.777183 43 5 0.92411 264 6 0.878205 45 5 0.951921 158 5 0.863491 90 5 0.985714 52 5 0.859982 225 6 0.8428571 18 1 0.91975 95 5 0.946667 67 5 0.958758 129 5 0.7100000 28 5 0.533333 10 0 0.9722222 119 5 0.987654 111 5 0.786508 127 5 0.717582 37 5 0.920993 115 5 0.938421 116 5 0.6948052 108 5 0.923611 41 5 0.9633443 172 6 0.76975 83 5 0.905714 64 5 0.939394 133 5 0.92022 186 6 0.879745 126 6 0.957082 144 6 0.9618212 123 6 0.991667 32 1 1.000000 35 1 1.000000 2 0 0.820833 91 5 0.9940476 141 5 0.972453 133 5 0.979045 135 6 0.9695740 95 5 0.967742 75 5 0.962560 131 6 0.91174 0.808762 0.913793 0.942546 0.810971 0.914644 0.823276 0.937598 0.875763 0.988793 0.852485 0.815887 0.909984 0.914080 0.963988 0.7120690 0.607187 0.954023 0.966794 0.948050 0.840517 0.913481 0.958326 0.952586 0.938578 0.941684 0.821245 0.810222 0.946708 0.883592 0.924037 0.942208 0.9592451 0.9813218 NA NA 0.975287 0.983990 0.968429 0.976281 0.9673008 0.927697 0.974013 1 0.906328 0.918429 -0.01152417 5 0.84190 0.827060 0.01484251 0.744085 0.5844676 insignificant 1 1 insignificant 0.6652983 0.725341 insignificant 1 1 insignificant -0.01205184 0.752141 lowCoverage 1 lowCoverage 0.906375 0.971698 -0.0674101 5 0.861665 0.846865 0.01479996 9.9911e-01 7.8392e-03 weaklyHypometh 1.0000e+00 0.7839246 insignificant 9.9840e-01 2.2135e-03 weaklyHypometh 1.0000e+00 0.7378335 insignificant -0.0958918 2.6753e-02 lowCoverage 0.60201387 lowCoverage 0.907592 0.964851 -0.05848772 5 0.915553 0.96457 -0.0490166 0.9974006 6.4627e-03 weaklyHypometh 1.00000 0.461625 insignificant 0.9904372 1.5933e-03 weaklyHypometh 1.00000 0.1991672 insignificant -0.10477175 7.5227e-04 lowCoverage 0.0677985 lowCoverage 0.91843 0.973995 -0.056998 5 0.827060 0.967846 -0.1407854 9.9920e-01 1.0089e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 9.9999e-01 0.0040663 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.0838399 5.3865e-02 lowCoverage 0.99749100 lowCoverage 0.919758 0.964851 -0.0476881 5 0.909348 0.96457 -0.0552217 0.99910534 9.2914e-03 weaklyHypometh 1.0000000 0.796037 insignificant 0.9996817 0.0074499 weaklyHypometh 1.00000 1 insignificant -0.0927199 0.0060003 weaklyHypometh 0.50003 insignificant 0.973934 0.964851 0.0102391 5 0.962487 0.964570 -0.0020832 0.69113120 8.6317e-01 insignificant 1.000000 1.0000e+00 insignificant 0.63570261 9.7985e-01 insignificant 1.00000 1.0000e+00 insignificant -0.008880 7.7032e-01 lowCoverage 1.00000000 lowCoverage chr3 58133850 58134850 12375 ENSG00000197750 0.806001 419 5 0.495901 164 5 0.734983 153 5 0.6337266 204 5 0.727433 107 5 0.74419 499 5 0.771520 215 5 0.738074 259 5 0.563026 170 5 0.593388 132 5 0.626543 344 5 0.6872565 75 5 0.71942 190 5 0.532122 188 5 0.722637 261 5 0.6590909 76 2 0.000000 1 0 0.8176587 656 5 0.716127 320 5 0.755636 228 5 0.600294 105 5 0.695758 97 5 0.825749 239 5 0.6021802 139 5 0.811751 77 5 0.8421940 335 5 0.54830 297 5 0.823620 98 5 0.789548 257 5 0.67106 328 5 0.761208 275 5 0.779750 380 5 0.6565746 146 5 0.365525 292 5 0.606349 121 5 0.500000 15 0 0.546226 222 5 0.3925697 413 5 0.636739 361 5 0.772154 195 5 0.6267739 369 5 0.593090 658 5 0.756230 222 5 0.81062 0.586220 0.738449 0.741233 0.625010 0.688490 0.717397 0.682743 0.651826 0.807179 0.732260 0.653882 0.695364 0.726973 0.708836 0.6391645 NA 0.737658 0.700369 0.697708 0.856979 0.620327 0.759072 0.751319 0.772382 0.789301 0.640935 0.764094 0.790274 0.740108 0.758506 0.831952 0.7413146 0.4402101 0.737425 0.4348592 0.634421 0.489717 0.739129 0.694298 0.6064028 0.570788 0.663584 5 0.726454 0.770461 -0.04826598 5 0.67617 0.728282 -0.05211571 0.994314 0.0032947 weaklyHypometh 1 1 insignificant 0.9969416 0.021301 weaklyHypometh 1 1 insignificant -0.07704744 0.129242 lowCoverage 1 lowCoverage 0.726454 0.546733 0.1751382 5 0.676166 0.518394 0.15777210 1.3011e-16 7.6475e-02 weaklyHypermeth 9.1915e-15 1.0000000 weaklyHypermeth 1.6881e-03 5.7105e-01 weaklyHypermeth 4.5625e-02 1.0000000 weaklyHypermeth 0.1410296 3.9677e-02 lowCoverage 0.80974463 lowCoverage 0.726492 0.698615 0.04908686 5 0.677523 0.66707 0.0104550 0.0304939 9.8301e-01 weaklyHypermeth 0.98368 1.000000 insignificant 0.3990387 8.4156e-01 insignificant 1.00000 1.0000000 insignificant -0.02476035 6.5203e-01 lowCoverage 1.0000000 lowCoverage 0.77046 0.546733 0.221416 5 0.728282 0.518394 0.2098878 5.5732e-12 6.8711e-01 hypermethylated 3.4833e-10 1.000000 hypermethylated 1.9500e-03 0.9173645 weaklyHypermeth 5.1696e-02 1.00000 weaklyHypermeth 0.2180770 3.4899e-03 lowCoverage 0.13422610 lowCoverage 0.770698 0.698615 0.0931645 5 0.737084 0.66707 0.0700158 0.00087251 9.9666e-01 weaklyHypermeth 0.0545318 1.000000 weaklyHypermeth 0.0437606 0.9625774 weaklyHypermeth 1.00000 1 insignificant 0.0522871 0.2920779 insignificant 1.00000 insignificant 0.547639 0.698615 -0.1382435 5 0.592451 0.667068 -0.0746179 0.24980224 2.8470e-04 weaklyHypometh 1.000000 8.1344e-03 weaklyHypometh 0.82248765 6.2983e-02 insignificant 1.00000 9.1727e-01 insignificant -0.165790 2.1770e-02 lowCoverage 0.57290211 lowCoverage chr3 63975950 63976950 12438 ATXN7 ENSG00000163635 0.798254 183 9 0.733817 168 9 0.762077 144 5 0.9458924 108 9 0.653545 115 9 0.78735 313 9 0.725302 96 5 0.801291 135 9 0.705839 100 5 0.720805 111 5 0.757442 310 9 0.7662899 99 5 0.67944 132 9 0.822917 28 1 0.859266 117 5 0.5594406 93 8 0.685072 110 5 0.7159222 120 5 0.814094 161 5 0.828622 259 9 0.452505 64 5 0.806878 53 4 0.805101 157 8 0.7893315 57 5 0.690097 85 9 0.7639801 214 9 0.80106 107 7 0.587500 59 5 0.647506 112 5 0.77838 213 9 0.867254 161 7 0.666376 302 9 0.8421625 115 9 0.665483 135 9 0.647494 222 9 0.834343 73 5 0.604090 105 9 0.7718145 223 9 0.732981 164 5 0.846550 225 9 0.8031961 164 5 0.791479 194 5 0.689360 188 9 0.83538 0.757069 0.687095 0.930707 0.791897 0.831401 0.779450 0.777788 0.789448 0.719062 0.788126 0.809898 0.814107 0.777645 0.865656 0.7444070 0.764415 0.774832 0.868087 0.799144 0.820514 0.813879 0.754367 0.905966 0.914570 0.778179 0.782509 0.858752 0.814128 0.831942 0.794849 0.777360 0.8134317 0.6741747 0.684110 0.8445331 0.804324 0.808111 0.855108 0.850722 0.8583613 0.829934 0.837219 4 0.778084 0.781566 0.00560169 9 0.73438 0.587889 0.14648666 0.058868 0.7675938 insignificant 1 1 insignificant 0.0057115 0.669021 weaklyHypermeth 1 1 insignificant 0.03480336 0.379765 insignificant 1 insignificant 0.777778 0.745704 0.0279776 9 0.712240 0.672464 0.03977619 1.1897e-01 9.6664e-01 insignificant 1.0000e+00 1.0000000 insignificant 1.8761e-01 9.9901e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0285694 5.5056e-01 insignificant 1.00000000 insignificant 0.778084 0.822460 -0.05162106 5 0.734375 0.68228 0.0520963 0.9979451 1.0125e-02 weaklyHypometh 1.00000 0.532883 insignificant 0.9843180 1.6160e-02 weaklyHypometh 1.00000 0.8079781 insignificant -0.01657938 6.3187e-01 insignificant 1.0000000 insignificant 0.78305 0.745704 0.026011 9 0.636879 0.672464 -0.0355844 3.4817e-01 8.6873e-01 insignificant 1.0000e+00 1.000000 insignificant 4.9969e-01 0.9023367 insignificant 1.0000e+00 1.00000 insignificant -0.0062340 9.0952e-01 insignificant 1.00000000 insignificant 0.781566 0.822460 -0.0535862 5 0.587889 0.68228 -0.0943904 0.99480457 7.5983e-03 weaklyHypometh 1.0000000 0.759829 insignificant 0.9979305 0.0275434 weaklyHypometh 1.00000 1 insignificant -0.0513827 0.2595675 insignificant 1.00000 insignificant 0.745704 0.823340 -0.0828228 5 0.672464 0.739136 -0.0666719 0.99989326 9.0016e-05 weaklyHypometh 1.000000 3.2148e-03 weaklyHypometh 0.99999917 3.0472e-03 weaklyHypometh 1.00000 9.5225e-02 weaklyHypometh -0.045149 3.9153e-01 insignificant 1.00000000 insignificant chr3 66753750 66754750 12519 LRIG1 ENSG00000144749 0.838054 478 13 0.690907 395 14 0.706359 157 13 0.8792133 415 14 0.669148 222 13 0.75089 1445 14 0.681034 205 13 0.719863 343 13 0.665504 226 13 0.649392 233 13 0.691385 718 13 0.6052505 97 10 0.75487 464 14 0.836779 171 13 0.754930 254 13 0.7177430 74 6 0.543252 76 7 0.7648116 585 13 0.777537 304 13 0.795137 926 13 0.695199 186 11 0.728152 170 12 0.750621 288 13 0.8152091 363 11 0.822965 184 14 0.7543728 493 14 0.73176 284 10 0.688248 116 8 0.857757 380 13 0.84595 652 14 0.850052 505 13 0.792147 1311 14 0.7541186 302 12 0.770151 353 14 0.743205 392 13 0.816964 63 5 0.656998 218 14 0.7978722 458 14 0.828215 271 13 0.838667 444 13 0.7995631 412 14 0.821545 422 13 0.744790 405 13 0.83007 0.716110 0.709572 0.875540 0.739171 0.781193 0.744695 0.811427 0.767728 0.790667 0.811911 0.720954 0.786685 0.843587 0.744380 0.7888915 0.638804 0.828838 0.793542 0.847277 0.709161 0.779502 0.762362 0.850489 0.797854 0.857318 0.809793 0.764115 0.835740 0.826191 0.854224 0.788025 0.6980640 0.7594307 0.780345 0.7877083 0.682668 0.825865 0.847709 0.848010 0.8236337 0.811508 0.858290 9 0.838341 0.874696 -0.01526243 13 0.72625 0.754201 -0.02795426 0.996639 0.1861998 insignificant 1 1 insignificant 0.9998280 0.027036 weaklyHypometh 1 1 insignificant -0.05309949 0.044402 weaklyHypometh 1 insignificant 0.838515 0.787234 0.0433458 13 0.732519 0.732945 -0.00042585 1.4247e-03 9.2181e-01 weaklyHypermeth 2.4564e-02 1.0000000 weaklyHypermeth 6.1015e-01 7.5372e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0319483 2.9475e-01 insignificant 1.00000000 insignificant 0.838320 0.827533 -0.03166265 13 0.712560 0.78495 -0.0723950 0.9768823 4.9615e-02 weaklyHypometh 1.00000 1.000000 insignificant 0.9994375 1.3432e-02 weaklyHypometh 1.00000 0.7069619 insignificant -0.08195291 4.7653e-03 weaklyHypometh 0.2071852 insignificant 0.87495 0.787234 0.059685 14 0.754644 0.732945 0.0216990 2.8356e-05 9.9393e-01 weaklyHypermeth 6.9162e-04 1.000000 weaklyHypermeth 1.7577e-01 0.9964001 insignificant 1.0000e+00 1.00000 insignificant 0.0211512 4.7805e-01 insignificant 1.00000000 insignificant 0.874645 0.827533 -0.0107757 14 0.741912 0.78495 -0.0430430 0.77531561 3.4029e-01 insignificant 1.0000000 1.000000 insignificant 0.9669940 0.4745902 insignificant 1.00000 1 insignificant -0.0288534 0.2563039 insignificant 1.00000 insignificant 0.787234 0.827869 -0.0674400 14 0.732945 0.799952 -0.0670075 0.99990402 1.6041e-03 weaklyHypometh 1.000000 3.5646e-02 weaklyHypometh 0.99996547 1.2674e-01 insignificant 1.00000 1.0000e+00 insignificant -0.050005 1.1223e-01 insignificant 1.00000000 insignificant chr3 69374250 69375250 12547 ENSG00000210965 0.762621 216 8 0.612998 209 8 0.583897 126 8 0.6668290 133 8 0.628053 93 8 0.69821 412 8 0.481757 120 8 0.776740 134 8 0.504505 108 8 0.627404 69 6 0.609934 235 8 0.4680556 90 6 0.68002 82 8 0.809829 44 4 0.728160 85 6 0.5409388 86 5 0.558983 60 5 0.6879505 171 8 0.692052 201 6 0.699567 309 8 0.588889 58 6 0.635385 86 6 0.738628 138 8 0.7280754 80 8 0.616667 53 6 0.6280146 254 8 0.56199 105 8 0.646023 43 4 0.665287 105 8 0.69748 219 8 0.592184 203 8 0.612424 394 8 0.6803088 161 8 0.462585 110 8 0.652375 186 6 0.579365 33 4 0.707666 91 7 0.5813994 212 8 0.768876 167 8 0.684065 154 8 0.6658905 157 8 0.529047 155 6 0.790356 168 8 0.74843 0.620492 0.640561 0.733152 0.579821 0.729252 0.570327 0.789274 0.560776 0.715676 0.600493 0.630887 0.710018 0.699845 0.731657 0.6306151 0.651548 0.667673 0.652221 0.706436 0.679975 0.697305 0.736615 0.734482 0.621269 0.635393 0.615639 0.643436 0.638783 0.713138 0.624881 0.691703 0.6764722 0.5924695 0.591925 0.6002680 0.719482 0.583208 0.739286 0.687048 0.7185707 0.681033 0.783308 5 0.678176 0.693326 -0.00789404 8 0.69257 0.589157 0.10341329 0.785772 0.1224525 insignificant 1 1 insignificant 0.4699190 0.162540 insignificant 1 1 insignificant -0.00166156 0.951287 insignificant 1 insignificant 0.677960 0.627995 0.0518129 8 0.654141 0.606365 0.04777633 2.1053e-02 9.9334e-01 weaklyHypermeth 2.6317e-01 1.0000000 insignificant 1.9622e-01 9.0907e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0303089 4.9291e-01 insignificant 1.00000000 insignificant 0.678176 0.722846 -0.05009350 8 0.692570 0.73834 -0.0457673 0.9990376 4.5305e-02 weaklyHypometh 1.00000 1.000000 insignificant 0.9990731 3.0423e-02 weaklyHypometh 1.00000 1.0000000 insignificant -0.04672149 3.9634e-01 insignificant 1.0000000 insignificant 0.69412 0.627995 0.060040 8 0.662801 0.606365 0.0564364 9.0911e-04 9.9415e-01 weaklyHypermeth 1.5949e-02 1.000000 weaklyHypermeth 2.0189e-01 0.9306358 insignificant 1.0000e+00 1.00000 insignificant 0.0319705 4.4791e-01 insignificant 1.00000000 insignificant 0.693326 0.722846 -0.0476743 8 0.589157 0.73834 -0.1491806 0.99585635 6.7677e-02 insignificant 1.0000000 1.000000 insignificant 0.9834459 0.0815275 insignificant 1.00000 1 insignificant -0.0450599 0.3995778 insignificant 1.00000 insignificant 0.627995 0.722500 -0.1048926 8 0.606365 0.705630 -0.0992646 0.99984336 4.3450e-04 weaklyHypometh 1.000000 1.1743e-02 weaklyHypometh 0.99767834 1.7306e-02 weaklyHypometh 1.00000 3.6458e-01 insignificant -0.077030 2.2688e-01 insignificant 1.00000000 insignificant chr3 69673350 69674350 12551 FRMD4B ENSG00000114541 0.020422 1655 43 0.036501 1572 53 0.016192 1719 47 0.0070588 1289 45 0.007257 1179 45 0.10915 1975 47 0.010242 2049 51 0.032196 1334 51 0.006655 1736 45 0.010042 1855 45 0.016628 1636 51 0.0066592 1708 44 0.06815 1329 45 0.000000 127 6 0.021263 1787 45 0.0037324 1599 45 0.016663 1713 39 0.0097402 2175 40 0.034959 1191 45 0.067452 1787 45 0.059325 623 50 0.048827 1119 29 0.057829 1245 44 0.0238055 889 43 0.081286 1661 31 0.0062489 1965 53 0.07183 1230 47 0.026319 542 41 0.034365 1127 45 0.04352 2082 53 0.010132 1968 53 0.056683 2005 45 0.0192931 1464 52 0.021069 1420 45 0.039235 897 42 0.010269 803 39 0.053468 657 47 0.0995065 1916 53 0.016839 2402 44 0.007446 1849 49 0.0026455 1387 33 0.052016 1994 44 0.030940 1431 42 0.01212 0.037962 0.039528 0.013826 0.014745 0.089316 0.021417 0.029719 0.011506 0.023477 0.033334 0.013471 0.031300 NA 0.021651 0.0099896 0.014573 0.015810 0.035493 0.082133 0.069593 0.073823 0.048741 0.035491 0.053104 0.012507 0.062669 0.045856 0.028251 0.017355 0.025532 0.064414 0.0322982 0.0267584 0.052959 0.0257129 0.064348 0.096699 0.018566 0.019611 0.0069153 0.025665 0.030643 33 0.021329 0.040897 -0.00737032 45 0.06672 0.088765 -0.02204522 0.976835 0.6429765 insignificant 1 1 insignificant 0.9940810 0.821503 insignificant 1 1 insignificant -0.01829926 0.056906 insignificant 1 insignificant 0.021332 0.044851 -0.0183575 45 0.068838 0.056553 0.01228467 9.9648e-01 5.6774e-03 weaklyHypometh 1.0000e+00 0.7096704 insignificant 9.9957e-01 2.7431e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0154254 3.2926e-01 insignificant 1.00000000 insignificant 0.021118 0.010813 0.01042701 42 0.042432 0.05571 -0.0132782 0.2977982 9.8934e-01 insignificant 1.00000 1.000000 insignificant 0.7550763 9.9993e-01 insignificant 1.00000 1.0000000 insignificant 0.00307093 7.8383e-01 insignificant 1.0000000 insignificant 0.04079 0.044857 -0.011469 51 0.076931 0.057466 0.0194657 9.9775e-01 2.6928e-01 insignificant 1.0000e+00 1.000000 insignificant 9.9965e-01 0.7845303 insignificant 1.0000e+00 1.00000 insignificant 0.0028739 8.5347e-01 insignificant 1.00000000 insignificant 0.040501 0.010813 0.0175701 42 0.042708 0.05571 -0.0130024 0.55972491 9.9990e-01 insignificant 1.0000000 1.000000 insignificant 0.7739758 0.9999999 insignificant 1.00000 1 insignificant 0.0213702 0.0899232 insignificant 1.00000 insignificant 0.044488 0.010814 0.0326307 42 0.041314 0.056670 -0.0153566 0.46905273 1.0000e+00 insignificant 1.000000 1.0000e+00 insignificant 0.89840265 1.0000e+00 insignificant 1.00000 1.0000e+00 insignificant 0.018496 2.8263e-01 insignificant 1.00000000 insignificant chr3 71391850 71392850 12648 FOXP1 ENSG00000114861 0.786759 207 6 0.523973 157 6 0.529167 74 3 0.7684718 201 6 0.647933 71 2 0.68157 136 6 0.566564 56 2 0.755154 137 6 0.637302 52 6 0.869027 60 6 0.767848 165 6 0.5740741 27 2 0.57521 74 6 0.924930 86 2 0.580939 81 6 0.7592593 20 1 0.727273 22 1 0.7305018 190 6 0.690909 108 6 0.707784 107 6 0.670996 27 2 0.600000 10 0 0.577807 151 6 0.6929293 45 6 0.740741 22 2 0.8243613 107 6 0.65573 59 6 0.777778 15 2 0.739272 131 6 0.78737 136 6 0.739708 154 6 0.693627 100 6 0.6811157 82 5 0.731481 66 6 0.649267 108 6 0.750000 19 2 0.703968 62 6 0.7920707 147 6 0.836034 171 6 0.760948 199 6 0.6397135 191 6 0.784926 192 6 0.738087 203 6 0.80551 0.651828 0.649299 0.733647 0.705064 0.736077 0.655153 0.773612 0.676903 0.798978 0.762167 0.546729 0.784367 0.851902 0.787893 0.7196262 NA 0.781356 0.708879 0.667228 0.686248 0.647621 0.705860 0.524214 0.691589 0.801234 0.692173 0.735819 0.685057 0.760024 0.722206 0.658604 0.6608312 0.6209761 0.626476 0.7336449 0.712061 0.661597 0.778645 0.783149 0.7863343 0.839472 0.824411 2 0.746430 0.730408 0.02978975 6 0.68156 0.585837 0.09572724 0.065895 0.7929860 insignificant 1 1 insignificant 0.2144756 0.618509 insignificant 1 1 insignificant -0.01812805 0.584434 lowCoverage 1 lowCoverage 0.750628 0.685950 0.0757122 6 0.756646 0.718039 0.03860718 4.8434e-04 8.0777e-01 weaklyHypermeth 8.9693e-03 1.0000000 weaklyHypermeth 5.7280e-02 4.2205e-01 insignificant 8.1829e-01 1.0000000 insignificant -0.0277518 4.0140e-01 lowCoverage 1.00000000 lowCoverage 0.746305 0.788703 -0.05544111 6 0.652615 0.72819 -0.0755795 0.9991734 1.1734e-02 weaklyHypometh 1.00000 0.586678 insignificant 0.9993634 6.4950e-03 weaklyHypometh 1.00000 0.6398509 insignificant -0.06170958 1.6342e-01 lowCoverage 1.0000000 lowCoverage 0.73390 0.685950 0.055465 6 0.755006 0.718039 0.0369675 2.9678e-02 8.9770e-01 weaklyHypermeth 3.5864e-01 1.000000 insignificant 1.3371e-01 0.7473801 insignificant 1.0000e+00 1.00000 insignificant -0.0096237 7.5227e-01 lowCoverage 1.00000000 lowCoverage 0.730126 0.788703 -0.0848202 6 0.548185 0.72819 -0.1800093 0.99998974 9.5524e-03 weaklyHypometh 1.0000000 0.796037 insignificant 0.9998824 0.0139392 weaklyHypometh 1.00000 1 insignificant -0.0435815 0.2960685 lowCoverage 1.00000 lowCoverage 0.685950 0.792956 -0.1347461 6 0.718039 0.835023 -0.1169845 0.99991191 4.6578e-05 weaklyHypometh 1.000000 1.8223e-03 weaklyHypometh 0.99744102 1.9674e-03 weaklyHypometh 1.00000 7.0265e-02 weaklyHypometh -0.033958 4.0720e-01 insignificant 1.00000000 insignificant chr3 71543050 71544050 12659 FOXP1 ENSG00000114861 0.654582 180 5 0.783439 113 5 0.815032 82 5 0.8369306 136 5 0.732143 39 5 0.80147 229 5 0.675347 64 5 0.890949 90 5 0.384688 56 5 0.835103 66 5 0.780343 164 5 0.6642857 43 3 0.78814 78 5 0.513889 25 3 0.632500 37 3 0.8044444 34 3 0.620635 30 3 0.8708791 147 5 0.851901 82 5 0.745280 175 5 0.891204 43 4 0.872891 64 5 0.813930 124 5 0.8181818 69 5 0.871717 71 5 0.8011898 142 5 0.85549 95 5 0.770833 50 2 0.678468 58 5 0.85743 137 5 0.773819 118 5 0.878486 215 5 0.5605159 83 4 0.922393 40 5 0.904221 95 4 0.900000 23 3 0.868933 84 5 0.8284632 137 5 0.869132 155 5 0.885579 161 5 0.9274109 148 5 0.866089 158 3 0.848956 159 5 0.81246 0.806058 0.777447 0.880274 0.664238 0.827289 0.696122 0.855630 0.623207 0.845366 0.863251 0.698226 0.814668 0.777820 0.707634 0.8005966 0.726430 0.837739 0.854056 0.871980 0.844659 0.877933 0.814649 0.862111 0.872517 0.821913 0.881404 0.787752 0.861620 0.879205 0.841713 0.884245 0.7546607 0.9228245 0.894924 0.8825503 0.847753 0.811674 0.875639 0.919389 0.9340045 0.896098 0.884667 3 0.813369 0.853288 -0.03770343 5 0.73081 0.872022 -0.14120932 0.994441 0.0180445 weaklyHypometh 1 1 insignificant 0.9999071 0.007754 weaklyHypometh 1 1 insignificant -0.08953743 0.012481 lowCoverage 1 lowCoverage 0.814041 0.800866 -0.0040701 5 0.759665 0.793824 -0.03415940 6.6489e-01 3.0668e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.7090e-01 3.6077e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant -0.0966553 1.6196e-01 lowCoverage 1.00000000 lowCoverage 0.814655 0.920615 -0.08201225 5 0.779553 0.89289 -0.1133413 0.9999729 5.5514e-04 weaklyHypometh 1.00000 0.111027 insignificant 0.9999988 8.5451e-06 weaklyHypometh 1.00000 0.0085451 weaklyHypometh -0.14533418 1.2285e-04 lowCoverage 0.0153563 lowCoverage 0.85304 0.800866 0.031155 5 0.856025 0.793824 0.0622011 6.2350e-02 7.3460e-01 insignificant 6.7043e-01 1.000000 insignificant 4.5926e-01 0.7322763 insignificant 1.0000e+00 1.00000 insignificant -0.0071179 9.0703e-01 lowCoverage 1.00000000 lowCoverage 0.852792 0.920615 -0.0455484 5 0.808033 0.89289 -0.0848607 0.99705599 1.0529e-02 weaklyHypometh 1.0000000 0.809927 insignificant 0.9994976 0.0187773 weaklyHypometh 1.00000 1 insignificant -0.0557967 0.0243216 lowCoverage 1.00000 lowCoverage 0.801310 0.920615 -0.0802325 5 0.808432 0.892894 -0.0844621 0.97625968 2.1176e-03 weaklyHypometh 1.000000 4.4116e-02 weaklyHypometh 0.90288770 5.3486e-02 insignificant 1.00000 8.3572e-01 insignificant -0.048679 4.3040e-01 lowCoverage 1.00000000 lowCoverage chr3 72231950 72232950 12703 ENSG00000213456 0.058811 550 8 0.027548 640 8 0.062542 237 8 0.0526500 387 8 0.043395 266 8 0.13840 750 8 0.022534 379 8 0.030035 294 8 0.126142 279 8 0.031345 200 8 0.043252 481 8 0.0991987 136 8 0.10571 155 8 0.031238 108 6 0.094863 268 8 0.0505051 90 7 0.105461 73 3 0.0298510 527 7 0.080402 363 8 0.109485 589 8 0.056290 158 8 0.017500 121 4 0.173980 387 8 0.0090909 203 8 0.139706 175 6 0.0426534 630 8 0.13205 298 8 0.037052 155 8 0.046085 318 8 0.17853 643 8 0.130026 621 8 0.189628 558 8 0.0038314 403 8 0.002907 279 8 0.000000 370 7 0.030000 77 5 0.215834 359 8 0.0556312 538 8 0.255566 841 8 0.098887 583 8 0.0018643 525 8 0.012371 410 7 0.070916 529 8 0.07821 0.034197 0.066814 0.011302 0.047830 0.043279 0.042794 0.035286 0.039077 0.063460 0.048012 0.132593 0.014415 0.058915 0.026794 0.0706887 0.057372 0.034013 0.030744 0.012861 0.110803 0.013745 0.089293 0.022439 0.025841 0.025728 0.048142 0.068343 0.056755 0.021014 0.058013 0.115969 0.0040053 0.0058667 0.000000 0.0177957 0.039408 0.063291 0.008208 0.012966 0.0031737 0.012197 0.023460 7 0.036189 0.049331 -0.01154487 8 0.14925 0.082698 0.06655255 0.881490 0.4140537 insignificant 1 1 insignificant 0.7876408 0.887976 insignificant 1 1 insignificant -0.02888094 0.192462 insignificant 1 insignificant 0.035952 0.016304 0.0166911 8 0.150235 0.207748 -0.05751319 1.1251e-02 9.9803e-01 weaklyHypermeth 1.4804e-01 1.0000000 insignificant 3.6979e-03 9.3523e-01 weaklyHypermeth 8.5998e-02 1.0000000 weaklyHypermeth 0.0158013 6.6888e-01 insignificant 1.00000000 insignificant 0.036047 0.011781 0.02587799 8 0.088483 0.12532 -0.0368360 0.0125992 9.9873e-01 weaklyHypermeth 0.54779 1.000000 insignificant 0.0074243 9.9978e-01 weaklyHypermeth 0.49495 1.0000000 insignificant -0.02075232 6.7624e-01 insignificant 1.0000000 insignificant 0.05027 0.016288 0.028651 8 0.120794 0.180048 -0.0592545 2.5571e-02 9.9931e-01 weaklyHypermeth 3.2369e-01 1.000000 insignificant 2.9531e-02 0.9999932 weaklyHypermeth 4.7759e-01 1.00000 insignificant 0.0446822 2.8611e-01 insignificant 1.00000000 insignificant 0.049096 0.011777 0.0376704 8 0.049365 0.11696 -0.0675995 0.06202376 9.8875e-01 insignificant 1.0000000 1.000000 insignificant 0.0378454 0.9989160 weaklyHypermeth 1.00000 1 insignificant 0.0081286 0.8756760 insignificant 1.00000 insignificant 0.015810 0.011100 0.0064706 8 0.130825 0.083677 0.0471476 0.89033459 9.7486e-01 insignificant 1.000000 1.0000e+00 insignificant 0.99372115 9.7015e-01 insignificant 1.00000 1.0000e+00 insignificant -0.036554 5.3927e-01 insignificant 1.00000000 insignificant chr3 72232250 72233250 12704 ENSG00000213456 0.058811 550 8 0.027548 640 8 0.062542 237 8 0.0526500 387 8 0.043395 266 8 0.13840 750 8 0.022534 379 8 0.030035 294 8 0.126142 279 8 0.031345 200 8 0.043252 481 8 0.0991987 136 8 0.10571 155 8 0.031238 108 6 0.094863 268 8 0.0505051 90 7 0.105461 73 3 0.0298510 527 7 0.080402 363 8 0.109485 589 8 0.056290 158 8 0.017500 121 4 0.173980 387 8 0.0090909 203 8 0.139706 175 6 0.0426534 630 8 0.13205 298 8 0.037052 155 8 0.046085 318 8 0.17853 643 8 0.130026 621 8 0.189628 558 8 0.0038314 403 8 0.002907 279 8 0.000000 370 7 0.030000 77 5 0.215834 359 8 0.0556312 538 8 0.255566 841 8 0.098887 583 8 0.0018643 525 8 0.012371 410 7 0.070916 529 8 0.07821 0.034197 0.066814 0.011302 0.047830 0.043279 0.042794 0.035286 0.039077 0.063460 0.048012 0.132593 0.014415 0.058915 0.026794 0.0706887 0.057372 0.034013 0.030744 0.012861 0.110803 0.013745 0.089293 0.022439 0.025841 0.025728 0.048142 0.068343 0.056755 0.021014 0.058013 0.115969 0.0040053 0.0058667 0.000000 0.0177957 0.039408 0.063291 0.008208 0.012966 0.0031737 0.012197 0.023460 7 0.036189 0.049331 -0.01154487 8 0.14925 0.082698 0.06655255 0.881490 0.4140537 insignificant 1 1 insignificant 0.7876408 0.887976 insignificant 1 1 insignificant -0.02888094 0.192462 insignificant 1 insignificant 0.035952 0.016304 0.0166911 8 0.150235 0.207748 -0.05751319 1.1251e-02 9.9803e-01 weaklyHypermeth 1.4804e-01 1.0000000 insignificant 3.6979e-03 9.3523e-01 weaklyHypermeth 8.5998e-02 1.0000000 weaklyHypermeth 0.0158013 6.6888e-01 insignificant 1.00000000 insignificant 0.036047 0.011781 0.02587799 8 0.088483 0.12532 -0.0368360 0.0125992 9.9873e-01 weaklyHypermeth 0.54779 1.000000 insignificant 0.0074243 9.9978e-01 weaklyHypermeth 0.49495 1.0000000 insignificant -0.02075232 6.7624e-01 insignificant 1.0000000 insignificant 0.05027 0.016288 0.028651 8 0.120794 0.180048 -0.0592545 2.5571e-02 9.9931e-01 weaklyHypermeth 3.2369e-01 1.000000 insignificant 2.9531e-02 0.9999932 weaklyHypermeth 4.7759e-01 1.00000 insignificant 0.0446822 2.8611e-01 insignificant 1.00000000 insignificant 0.049096 0.011777 0.0376704 8 0.049365 0.11696 -0.0675995 0.06202376 9.8875e-01 insignificant 1.0000000 1.000000 insignificant 0.0378454 0.9989160 weaklyHypermeth 1.00000 1 insignificant 0.0081286 0.8756760 insignificant 1.00000 insignificant 0.015810 0.011100 0.0064706 8 0.130825 0.083677 0.0471476 0.89033459 9.7486e-01 insignificant 1.000000 1.0000e+00 insignificant 0.99372115 9.7015e-01 insignificant 1.00000 1.0000e+00 insignificant -0.036554 5.3927e-01 insignificant 1.00000000 insignificant chr3 72309050 72310050 12720 ENSG00000213456 0.866607 666 15 0.769389 381 16 0.735058 335 15 0.9304975 412 11 0.888996 192 15 0.86594 676 16 0.886594 286 13 0.840544 368 16 0.848612 232 11 0.840991 238 15 0.935041 548 17 0.9208333 143 15 0.87425 270 15 0.905681 64 4 0.870760 314 15 0.7826122 116 9 0.777142 121 8 0.7425891 474 11 0.917982 320 14 0.921385 511 11 0.855514 172 12 0.721625 192 11 0.882805 349 17 0.8594339 241 14 0.824722 168 10 0.8950343 415 17 0.82511 245 13 0.710205 138 12 0.803775 249 11 0.93123 412 16 0.915924 424 16 0.932268 600 15 0.0975717 552 16 0.103614 304 12 0.323999 385 13 0.000000 116 8 0.177971 407 16 0.0083548 607 16 0.815961 472 11 0.748987 478 11 0.8228043 408 11 0.744612 502 11 0.742310 465 11 0.87666 0.713060 0.661325 0.910162 0.874320 0.874989 0.888995 0.815880 0.827719 0.854391 0.912068 0.866988 0.845766 0.865213 0.874436 0.7817353 0.737799 0.658944 0.876285 0.886613 0.923264 0.657093 0.862610 0.921203 0.851425 0.851864 0.851761 0.840707 0.801083 0.883732 0.852239 0.921008 0.0282978 0.0408308 0.135158 0.0096443 0.161812 0.012336 0.873091 0.805629 0.8373593 0.739687 0.741649 9 0.839772 0.869553 -0.02668693 15 0.78840 0.753032 0.03536970 0.986786 0.1295689 insignificant 1 1 insignificant 0.9425606 0.298216 insignificant 1 1 insignificant 0.00960450 0.711799 insignificant 1 insignificant 0.839976 0.074262 0.7655283 15 0.801216 0.103929 0.69728699 2.5820e-174 1.0000e+00 hypermethylated 2.5820e-171 1.0000000 hypermethylated 5.1452e-36 1.0000e+00 hypermethylated 5.1452e-33 1.0000000 hypermethylated 0.7374903 8.5577e-06 hypermethylated 0.00071314 hypermethylated 0.840000 0.810323 0.03770291 11 0.811155 0.69852 0.1126352 0.0041443 9.9563e-01 weaklyHypermeth 0.24378 1.000000 insignificant 0.0435752 9.9984e-01 weaklyHypermeth 1.00000 1.0000000 insignificant 0.08114073 5.9565e-03 weaklyHypermeth 0.2481873 insignificant 0.86979 0.074230 0.803119 16 0.790684 0.098733 0.6919511 8.0186e-130 1.0000e+00 hypermethylated 8.0186e-127 1.000000 hypermethylated 2.7623e-30 1.0000000 hypermethylated 2.7623e-27 1.00000 hypermethylated 0.7278858 2.9483e-06 hypermethylated 0.00029483 hypermethylated 0.869795 0.810323 0.0645627 11 0.790684 0.69852 0.0921637 0.00011534 9.9999e-01 weaklyHypermeth 0.0096113 1.000000 weaklyHypermeth 0.0028421 0.9993300 weaklyHypermeth 0.22053 1 insignificant 0.0715362 0.0238229 weaklyHypermeth 1.00000 insignificant 0.074262 0.810671 -0.7282421 11 0.103929 0.735284 -0.6313552 1.00000000 1.5112e-67 hypomethylated 1.000000 1.5112e-64 hypomethylated 1.00000000 1.8373e-17 hypomethylated 1.00000 1.8373e-14 hypomethylated -0.656350 1.0812e-05 hypomethylated 0.00188193 hypomethylated chr3 72452350 72453350 12738 ENSG00000212070 0.749637 125 5 0.579286 46 5 0.770000 28 2 0.8390476 95 4 0.809524 16 1 0.89580 132 5 0.942857 23 2 0.842735 58 5 1.000000 18 1 0.833333 19 2 0.840968 100 5 0.5714286 13 2 0.96957 68 5 0.777778 8 0 0.933333 21 2 0.5000000 5 0 0.500000 4 0 0.7501282 174 4 0.866979 78 5 0.865916 114 5 0.916667 32 2 0.766667 15 0 0.800000 29 2 0.9333333 15 1 0.963730 223 3 0.9333333 48 5 0.77697 64 5 0.920000 14 1 0.861905 38 2 0.83484 68 5 0.797403 86 5 0.887489 129 5 0.7307692 48 5 0.769198 69 5 0.625000 22 3 0.800000 13 0 0.828571 30 4 0.7891547 125 5 0.726667 58 4 0.880265 110 5 0.8974359 87 4 0.811096 61 5 0.814886 72 5 0.71463 0.606203 0.765789 0.809774 0.749373 0.897560 0.924812 0.828160 1.000000 0.859001 0.832310 0.721156 0.959966 0.755278 0.912281 0.6835621 NA 0.713259 0.843548 0.855986 0.890351 0.789474 0.789474 0.912281 0.971366 0.912281 0.760766 0.894737 0.853383 0.812252 0.805605 0.879263 0.6773279 0.7508021 0.599268 0.7368421 0.789474 0.744901 0.714035 0.878752 0.9014845 0.780150 0.796441 0 0.853275 0.873850 -0.02446139 5 0.84509 0.868785 -0.02369196 0.907375 0.1086718 insignificant 1 1 insignificant 0.8802854 0.314805 insignificant 1 1 insignificant -0.07411153 0.065267 lowCoverage 1 lowCoverage 0.853275 0.775244 0.0777928 5 0.845093 0.759325 0.08576839 8.1612e-03 2.8730e-01 weaklyHypermeth 1.1495e-01 1.0000000 insignificant 1.4635e-01 4.9404e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0348006 4.4362e-01 lowCoverage 1.00000000 lowCoverage 0.853275 0.842784 0.02222608 5 0.845093 0.81914 0.0259523 0.4059032 8.8071e-01 insignificant 1.00000 1.000000 insignificant 0.1488692 9.5646e-01 insignificant 1.00000 1.0000000 insignificant -0.03415372 4.5820e-01 lowCoverage 1.0000000 lowCoverage 0.87385 0.775244 0.096586 5 0.868785 0.759325 0.1094603 1.7099e-04 5.4918e-01 weaklyHypermeth 3.4957e-03 1.000000 weaklyHypermeth 5.2497e-02 0.7352220 insignificant 7.2913e-01 1.00000 insignificant 0.1089121 1.2667e-02 lowCoverage 0.33333200 lowCoverage 0.873850 0.842784 0.0457367 5 0.868785 0.81914 0.0496443 0.03737570 9.9646e-01 weaklyHypermeth 1.0000000 1.000000 insignificant 0.0960495 0.9874998 insignificant 1.00000 1 insignificant 0.0399578 0.3028848 lowCoverage 1.00000 lowCoverage 0.775244 0.842784 -0.0449739 5 0.759325 0.819141 -0.0598161 0.06685877 2.1759e-01 insignificant 1.000000 1.0000e+00 insignificant 0.13709712 3.6268e-01 insignificant 1.00000 1.0000e+00 insignificant -0.068954 1.3804e-01 lowCoverage 1.00000000 lowCoverage chr3 73060650 73061650 12795 GXYLT2 ENSG00000172986 0.622727 34 2 0.755727 101 5 0.671429 38 2 0.1000000 50 2 0.799206 53 5 0.61128 98 5 0.455556 64 5 0.616667 47 5 0.914286 46 5 0.751429 32 5 0.786072 94 5 0.7575758 60 5 0.75915 57 5 NA 0 0 0.862857 65 5 0.4477778 39 3 0.634794 65 5 0.6000000 60 2 0.746395 88 5 0.647222 42 2 0.563276 35 3 0.028382 48 2 0.726316 43 2 0.6733333 19 2 0.400000 39 2 0.8052632 72 5 0.62886 64 5 0.800000 22 2 0.636818 81 5 0.77923 77 5 0.677165 65 5 0.676210 86 5 0.7505263 68 5 0.689594 80 5 1.000000 127 5 0.646667 15 2 0.454231 41 4 0.6428571 50 5 0.600000 73 5 0.720000 40 5 0.6153846 32 2 0.430769 29 2 0.520000 38 4 0.38333 0.591810 0.496825 0.314645 0.734259 0.334017 0.285185 0.342063 0.842857 0.580952 0.668320 0.579293 0.643525 NA 0.752381 0.1992593 0.447511 0.341667 0.562760 0.352778 0.376022 0.154520 0.498246 0.617778 0.166667 0.642105 0.378364 0.633333 0.382323 0.643077 0.446789 0.406586 0.6259649 0.4785659 1.000000 0.4666667 0.193077 0.459524 0.266667 0.486667 0.2974359 0.189744 0.240000 1 0.573698 0.476190 0.05030417 5 0.68077 0.657314 0.02345789 0.394233 0.6471980 insignificant 1 1 insignificant 0.7640588 0.568558 insignificant 1 1 insignificant 0.04376977 0.566372 lowCoverage 1 lowCoverage 0.573698 0.732283 -0.1452549 5 0.680772 0.779034 -0.09826173 9.2762e-01 4.8084e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant 6.2240e-01 7.9754e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0373046 6.6778e-01 lowCoverage 1.00000000 lowCoverage 0.573698 0.301887 0.19379997 2 0.680772 0.59227 0.0885067 0.0173285 6.2480e-01 lowCoverage 0.72202 1.000000 lowCoverage 0.0150813 4.4844e-01 lowCoverage 0.88714 1.0000000 lowCoverage 0.08277710 2.2291e-01 lowCoverage 1.0000000 lowCoverage 0.47619 0.732283 -0.214248 5 0.657314 0.779034 -0.1217196 7.8529e-01 1.7099e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 5.6876e-01 0.6678507 insignificant 1.0000e+00 1.00000 insignificant -0.0810743 4.1444e-01 lowCoverage 1.00000000 lowCoverage 0.476190 0.301887 0.1356112 2 0.657314 0.59227 0.0650488 0.04181098 8.5830e-01 lowCoverage 1.0000000 1.000000 lowCoverage 0.0829939 0.7535085 lowCoverage 1.00000 1 lowCoverage 0.0390073 0.6293522 lowCoverage 1.00000 lowCoverage 0.732283 0.301887 0.3737210 2 0.779034 0.592266 0.1867684 0.01363019 6.9313e-01 lowCoverage 1.000000 1.0000e+00 lowCoverage 0.15744205 4.2981e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.120082 2.0569e-01 lowCoverage 1.00000000 lowCoverage chr3 73205350 73206350 12805 PPP4R2 ENSG00000163605 0.768332 212 6 0.784735 270 8 0.760385 137 7 0.8224840 130 5 0.816720 116 8 0.75713 288 6 0.770175 96 6 0.766048 168 8 0.782819 137 8 0.841282 144 8 0.801639 281 8 0.7552133 109 8 0.86198 197 8 NA 0 0 0.867682 127 8 0.7291667 38 5 0.772436 80 8 0.7994210 149 6 0.852519 214 8 0.843571 219 6 0.744147 89 7 0.771429 34 5 0.833071 166 7 0.7426464 65 7 0.619048 24 3 0.8407372 323 8 0.82280 89 7 0.701389 47 4 0.879235 192 8 0.84431 357 8 0.846969 296 8 0.716281 309 6 0.8099320 231 8 0.786890 183 8 0.825491 150 5 0.806052 70 4 0.772109 57 5 0.8522555 242 8 0.857689 182 5 0.761971 181 6 0.8662574 181 5 0.841057 175 5 0.859315 184 5 0.76166 0.736600 0.742454 0.734991 0.763786 0.762118 0.779892 0.683906 0.711249 0.777215 0.734507 0.735782 0.799390 NA 0.811289 0.7425829 0.733521 0.780007 0.822795 0.785541 0.754945 0.768915 0.796410 0.712274 0.629145 0.789181 0.809095 0.810937 0.853198 0.782821 0.805461 0.720644 0.7550889 0.7054781 0.773011 0.7776323 0.718358 0.787778 0.793207 0.782872 0.8000654 0.851693 0.825222 4 0.819730 0.816675 -0.01220458 8 0.81025 0.825896 -0.01564410 0.916931 0.1288466 insignificant 1 1 insignificant 0.6403575 0.204123 insignificant 1 1 insignificant 0.01739278 0.483574 insignificant 1 insignificant 0.819730 0.809218 0.0022315 8 0.810252 0.818280 -0.00802844 5.9374e-01 3.5010e-01 insignificant 1.0000e+00 1.0000000 insignificant 8.7809e-01 1.9582e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0112230 4.6524e-01 insignificant 1.00000000 insignificant 0.819730 0.840532 -0.04061674 5 0.810252 0.84184 -0.0315914 0.9584601 8.6849e-03 weaklyHypometh 1.00000 0.532883 insignificant 0.9998406 2.5040e-03 weaklyHypometh 1.00000 0.2782209 insignificant -0.03969268 1.1317e-01 insignificant 1.0000000 insignificant 0.81668 0.809218 0.015459 8 0.825896 0.818280 0.0076157 4.6147e-01 8.1420e-01 insignificant 1.0000e+00 1.000000 insignificant 7.0782e-01 0.3977811 insignificant 1.0000e+00 1.00000 insignificant -0.0286157 2.7225e-01 insignificant 1.00000000 insignificant 0.816675 0.840532 -0.0295065 5 0.825896 0.84184 -0.0159473 0.95701182 2.4133e-01 insignificant 1.0000000 1.000000 insignificant 0.9871218 0.0508960 insignificant 1.00000 1 insignificant -0.0570855 0.0744489 insignificant 1.00000 insignificant 0.809218 0.840532 -0.0589559 5 0.818280 0.841843 -0.0235630 0.91216994 7.2535e-02 insignificant 1.000000 8.6351e-01 insignificant 0.97353174 1.2549e-01 insignificant 1.00000 1.0000e+00 insignificant -0.028470 2.4737e-01 insignificant 1.00000000 insignificant chr3 73274150 73275150 12806 ENSG00000223247 0.946387 106 6 0.927685 245 6 0.865079 33 2 0.9570503 204 6 1.000000 22 2 0.97461 98 6 0.836111 46 6 0.971678 108 6 0.800000 7 0 0.937949 81 5 0.874571 151 6 0.5000000 2 0 0.93411 200 6 0.796296 54 6 1.000000 29 5 1.0000000 5 0 0.333333 5 0 0.9102396 102 5 0.933548 136 5 0.930673 143 6 0.852885 39 4 0.945858 101 6 0.903359 100 6 0.6666667 18 0 0.833333 13 0 0.9702381 129 6 0.88680 49 6 0.549603 32 3 0.919393 115 5 0.92929 155 6 0.955471 223 6 0.889760 193 6 0.5533259 175 6 0.600000 5 0 0.318777 277 6 0.500000 10 1 0.570301 88 6 0.4468849 277 6 0.902778 21 0 0.984365 153 5 0.9814815 41 5 NA 0 0 0.902334 81 6 0.92485 0.938208 0.875776 0.958565 1.000000 0.962677 0.852174 0.958227 0.737475 0.939535 0.862484 0.724663 0.919454 0.805314 1.000000 0.9366960 0.550885 0.894145 0.910561 0.934081 0.872993 0.965739 0.906556 0.521739 0.869565 0.969634 0.846414 0.604555 0.910256 0.912102 0.946992 0.886831 0.4847829 0.6067058 0.243413 0.5429031 0.473261 0.341433 0.858696 0.990651 0.9758454 NA 0.866399 0 0.926843 0.911740 0.01416138 6 0.93113 0.913179 0.01795264 0.161423 0.9512206 insignificant 1 1 insignificant 0.0424414 0.925050 weaklyHypermeth 1 1 insignificant 0.01291137 0.807445 lowCoverage 1 lowCoverage 0.926843 0.436298 0.4658151 6 0.931131 0.461638 0.46949311 6.3831e-34 1.0000e+00 hypermethylated 1.2766e-31 1.0000000 hypermethylated 4.7241e-07 1.0000e+00 hypermethylated 5.9051e-05 1.0000000 hypermethylated 0.3732513 1.2614e-05 lowCoverage 0.00097032 lowCoverage 0.926843 0.956081 -0.02518300 5 0.931131 0.94995 -0.0188183 0.9393918 1.7142e-01 insignificant 1.00000 1.000000 insignificant 0.9662366 2.1657e-01 insignificant 1.00000 1.0000000 insignificant -0.07127350 1.2466e-01 lowCoverage 1.0000000 lowCoverage 0.91174 0.436298 0.462454 6 0.913179 0.461638 0.4515405 9.3050e-23 1.0000e+00 hypermethylated 1.3293e-20 1.000000 hypermethylated 3.9852e-05 0.9995383 hypermethylated 2.4121e-03 1.00000 hypermethylated 0.3603399 2.9124e-05 lowCoverage 0.00224030 lowCoverage 0.911740 0.956081 -0.0396724 5 0.913179 0.94995 -0.0367710 0.98492354 1.2906e-01 insignificant 1.0000000 1.000000 insignificant 0.9454012 0.0214751 weaklyHypometh 1.00000 1 insignificant -0.0841849 0.0721675 lowCoverage 1.00000 lowCoverage 0.436298 0.956081 -0.4459074 5 0.461638 0.949950 -0.4883114 1.00000000 2.1481e-11 hypomethylated 1.000000 2.1481e-09 hypomethylated 0.99999867 9.4634e-05 hypomethylated 1.00000 8.6031e-03 hypomethylated -0.444525 2.6416e-05 lowCoverage 0.00330198 lowCoverage chr3 75910050 75911050 12813 FRG2C ENSG00000172969 0.874459 952 25 0.816580 1497 24 0.829506 1178 25 0.8124134 520 23 0.815146 922 14 0.83894 1438 25 0.866609 1004 16 0.900510 1025 17 0.853089 1027 16 0.902480 865 16 0.828598 1238 17 0.7862254 639 15 0.80613 970 17 0.830623 152 9 0.901434 927 17 0.8011567 349 13 0.836319 1424 16 0.8117204 656 23 0.876292 975 17 0.898505 1443 25 0.833054 250 14 0.791687 426 17 0.898194 671 25 0.7222032 443 15 0.846197 207 16 0.8985568 1446 25 0.81730 343 16 0.848323 362 16 0.895322 1196 17 0.88874 1516 25 0.811886 1326 25 0.855075 1416 25 0.8547193 1405 25 0.674382 636 16 0.851387 1041 23 0.701945 183 13 0.839577 851 17 0.7900271 1608 25 0.806553 1090 22 0.862341 1088 24 0.8465222 763 21 0.866458 605 22 0.842273 953 25 0.90146 0.873354 0.833756 0.899748 0.882673 0.889697 0.861028 0.904882 0.858281 0.902708 0.898361 0.853104 0.870727 0.848996 0.901902 0.8075635 0.854608 0.907427 0.884497 0.877825 0.900213 0.820664 0.912036 0.849738 0.902910 0.904638 0.800262 0.918447 0.894435 0.924855 0.893540 0.894078 0.8157083 0.7206492 0.816707 0.7568221 0.850258 0.813336 0.881166 0.906431 0.8707281 0.914902 0.892784 15 0.875319 0.886482 -0.01729174 25 0.84117 0.840452 0.00072267 0.964125 0.0129535 weaklyHypometh 1 1 insignificant 0.9133936 0.094249 insignificant 1 1 insignificant 0.00212510 0.903312 insignificant 1 insignificant 0.875319 0.804333 0.0738136 25 0.841175 0.811600 0.02957427 2.1384e-12 9.3958e-01 weaklyHypermeth 1.0692e-10 1.0000000 weaklyHypermeth 6.0330e-06 9.6556e-01 weaklyHypermeth 3.6038e-04 1.0000000 weaklyHypermeth 0.0589974 1.3066e-01 insignificant 1.00000000 insignificant 0.875352 0.862858 0.00716858 23 0.842026 0.84944 -0.0074100 0.1786312 4.7706e-03 inconclusive 1.00000 0.366972 insignificant 0.7864630 1.6308e-01 insignificant 1.00000 1.0000000 insignificant -0.00049236 9.7162e-01 insignificant 1.0000000 insignificant 0.88648 0.804333 0.089097 25 0.840452 0.811600 0.0288516 1.2202e-11 9.9135e-01 weaklyHypermeth 6.1008e-10 1.000000 weaklyHypermeth 1.2004e-06 0.9877106 weaklyHypermeth 1.3337e-04 1.00000 weaklyHypermeth 0.0568723 1.5370e-01 insignificant 1.00000000 insignificant 0.886724 0.862858 0.0234636 23 0.853061 0.84944 0.0036251 0.06079884 1.8522e-01 insignificant 1.0000000 1.000000 insignificant 0.5505308 0.2886343 insignificant 1.00000 1 insignificant -0.0026175 0.8891138 insignificant 1.00000 insignificant 0.804371 0.862858 -0.0692843 23 0.813882 0.849436 -0.0355544 0.84526422 3.5112e-05 weaklyHypometh 1.000000 1.5266e-03 weaklyHypometh 0.98935124 2.8194e-04 weaklyHypometh 1.00000 2.3495e-02 weaklyHypometh -0.059490 1.3083e-01 insignificant 1.00000000 insignificant chr3 88873050 88874050 12923 ENSG00000207316 0.905320 208 7 0.777633 67 4 0.774124 106 8 0.9326057 116 7 0.817776 58 7 0.83431 188 8 0.903710 77 6 0.819345 68 4 0.848958 70 6 0.838934 65 8 0.831094 139 8 0.7863078 59 6 0.69125 56 6 NA 0 0 0.881622 82 8 0.8033951 58 6 0.822507 55 5 0.8842030 154 7 0.768155 92 6 0.873662 197 8 0.912121 47 5 0.846939 33 4 0.839768 145 9 0.7916667 37 3 0.861111 31 3 0.8490545 98 6 0.93333 37 3 0.980655 33 2 0.795844 74 4 0.92179 121 8 0.805862 87 6 0.858192 250 8 0.8574956 76 4 0.884980 67 6 0.877055 170 8 0.540765 38 4 0.880952 26 2 0.6440221 95 6 0.962150 170 7 0.918985 164 7 0.9185948 159 7 0.933386 176 7 0.951085 187 7 0.84578 0.738722 0.849960 0.922221 0.785086 0.800887 0.881457 0.841244 0.855914 0.897147 0.872536 0.855364 0.809443 NA 0.888752 0.8534588 0.853218 0.892369 0.868233 0.855982 0.913196 0.730900 0.885187 0.873118 0.805376 0.909770 0.875412 0.959370 0.791857 0.900384 0.858485 0.860419 0.8428776 0.8475374 0.814715 0.6186388 0.866917 0.815456 0.963372 0.929452 0.9020350 0.921946 0.933266 3 0.850131 0.870091 -0.01985153 6 0.84091 0.869957 -0.02904733 0.989679 0.2076062 insignificant 1 1 insignificant 0.9981905 0.046143 weaklyHypometh 1 1 insignificant -0.03505003 0.119601 insignificant 1 insignificant 0.850131 0.819915 0.0361575 6 0.840909 0.820900 0.02000923 1.4188e-01 9.5338e-01 insignificant 1.0000e+00 1.0000000 insignificant 1.5883e-01 9.2143e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0504326 4.5427e-01 insignificant 1.00000000 insignificant 0.850131 0.932243 -0.08235398 6 0.840909 0.93886 -0.0979472 0.9999996 3.7853e-05 weaklyHypometh 1.00000 0.018926 weaklyHypometh 0.9999960 5.0232e-05 weaklyHypometh 1.00000 0.0251160 weaklyHypometh -0.10552914 1.8364e-06 weaklyHypometh 0.0004591 weaklyHypometh 0.87009 0.819915 0.054581 4 0.869957 0.820900 0.0490566 3.7922e-02 9.9086e-01 lowCoverage 4.2609e-01 1.000000 lowCoverage 1.7638e-02 0.9936132 lowCoverage 3.2069e-01 1.00000 lowCoverage 0.0854827 2.2874e-01 insignificant 1.00000000 insignificant 0.870091 0.932243 -0.0630607 6 0.869957 0.93886 -0.0688999 0.99997241 4.1946e-03 weaklyHypometh 1.0000000 0.466071 insignificant 0.9985793 0.0930944 insignificant 1.00000 1 insignificant -0.0704791 0.0022807 weaklyHypometh 0.26032 insignificant 0.819915 0.932243 -0.1126147 4 0.820900 0.938857 -0.1179565 0.99999943 7.1988e-06 lowCoverage 1.000000 3.5994e-04 lowCoverage 0.99815499 1.1349e-03 lowCoverage 1.00000 4.7288e-02 lowCoverage -0.155962 5.1124e-02 insignificant 1.00000000 insignificant chr3 98894550 98895550 12973 EPHA6 ENSG00000080224 0.755855 203 5 0.699052 76 5 0.693775 72 5 0.8656140 82 5 0.891111 28 2 0.74942 141 5 0.655754 68 5 0.706667 67 4 0.735417 31 4 0.878472 37 4 0.756770 113 5 0.6861111 47 5 0.72185 75 4 NA 0 0 0.822637 60 5 0.6972222 49 5 0.678788 49 5 0.6721039 90 5 0.774226 91 5 0.788708 123 5 0.761580 36 4 0.944444 20 2 0.760910 102 5 0.5972222 25 2 0.888889 26 2 0.7930812 109 5 0.86111 23 2 0.821818 23 2 0.826573 63 5 0.76208 102 5 0.697709 95 5 0.801086 207 5 0.5345990 62 4 0.734359 65 4 0.641712 101 5 0.815686 57 5 0.753333 33 2 0.7325330 79 5 0.785273 182 5 0.815994 173 5 0.7310559 109 5 0.811237 186 5 0.732053 136 5 0.73622 0.752222 0.717337 0.839314 0.815886 0.765664 0.668634 0.760262 0.758943 0.848819 0.758116 0.640381 0.748112 NA 0.752793 0.6943297 0.655230 0.669653 0.804905 0.768993 0.728096 0.898559 0.780024 0.721792 0.811754 0.775227 0.861953 0.701728 0.844825 0.768670 0.790375 0.797981 0.5313283 0.5961221 0.615308 0.6815751 0.681818 0.732216 0.778566 0.842605 0.7420890 0.783806 0.732791 2 0.760985 0.790614 -0.03125127 5 0.75057 0.778874 -0.02830386 0.950472 0.0908137 insignificant 1 1 insignificant 0.9982096 0.027647 weaklyHypometh 1 1 insignificant -0.04411835 0.167319 lowCoverage 1 lowCoverage 0.760985 0.680101 0.0768512 5 0.750570 0.700309 0.05026055 5.2202e-05 7.3504e-01 weaklyHypermeth 1.1107e-03 1.0000000 weaklyHypermeth 4.5341e-03 7.8593e-01 weaklyHypermeth 1.0305e-01 1.0000000 insignificant 0.0468866 3.2038e-01 lowCoverage 1.00000000 lowCoverage 0.760985 0.792621 -0.03147563 5 0.750570 0.78122 -0.0306466 0.9714948 1.7776e-01 insignificant 1.00000 1.000000 insignificant 0.9252852 3.7734e-01 insignificant 1.00000 1.0000000 insignificant -0.02619866 3.1289e-01 lowCoverage 1.0000000 lowCoverage 0.79061 0.680101 0.111662 5 0.778874 0.700309 0.0785644 7.1936e-06 9.0685e-01 weaklyHypermeth 1.8445e-04 1.000000 weaklyHypermeth 1.7976e-03 0.9818380 weaklyHypermeth 5.1360e-02 1.00000 weaklyHypermeth 0.0910050 9.0256e-02 lowCoverage 1.00000000 lowCoverage 0.790614 0.792621 0.0018908 5 0.778874 0.78122 -0.0023427 0.71573705 6.1667e-01 insignificant 1.0000000 1.000000 insignificant 0.2159502 0.9833128 insignificant 1.00000 1 insignificant 0.0179197 0.5831029 lowCoverage 1.00000 lowCoverage 0.680101 0.792621 -0.1096303 5 0.700309 0.781216 -0.0809071 0.95410617 5.2565e-04 weaklyHypometh 1.000000 1.3833e-02 weaklyHypometh 0.87207158 1.5792e-02 weaklyHypometh 1.00000 3.4331e-01 insignificant -0.073085 1.4521e-01 lowCoverage 1.00000000 lowCoverage chr3 99783950 99784950 12981 GPR15 ENSG00000154165 0.687021 181 6 0.770205 129 6 0.629762 40 5 0.8037769 142 5 0.652381 38 6 0.74768 110 6 0.660714 42 6 0.633874 97 6 0.604167 36 3 0.666667 33 5 0.698547 177 6 0.3333333 18 0 0.72808 102 6 0.662698 52 3 0.615873 63 3 0.7500000 12 0 1.000000 6 0 0.7066095 206 4 0.617857 95 6 0.754524 82 6 0.840000 41 3 0.773333 20 2 0.738961 69 3 0.6027778 38 5 0.694178 174 2 0.7314574 81 6 0.78702 85 3 0.288095 27 3 0.693644 108 6 0.73161 82 6 0.767351 98 6 0.511180 85 6 0.7401552 101 6 0.676953 110 5 0.795572 62 5 0.700000 9 0 0.719481 142 3 0.7242424 86 6 0.700617 68 2 0.830234 112 5 0.5957806 168 5 0.549496 127 2 0.808697 119 5 0.68832 0.821312 0.630785 0.816274 0.691080 0.806738 0.676559 0.771922 0.672535 0.737089 0.720183 0.464789 0.726319 0.738431 0.634194 0.7887324 0.855721 0.824167 0.669416 0.816700 0.844000 0.801928 0.721511 0.628404 0.783255 0.810357 0.795877 0.749211 0.749482 0.772395 0.819123 0.677893 0.8050608 0.7500191 0.821649 0.6450829 0.733892 0.789501 0.747001 0.866692 0.6981280 0.604894 0.833934 0 0.718242 0.706725 0.02418921 6 0.70527 0.650490 0.05478120 0.630163 0.5750943 insignificant 1 1 insignificant 0.8470229 0.572862 insignificant 1 1 insignificant 0.00622079 0.904961 lowCoverage 1 lowCoverage 0.718072 0.707843 0.0337567 6 0.663167 0.726219 -0.06305282 4.1202e-01 5.8639e-01 insignificant 1.0000e+00 1.0000000 insignificant 7.9205e-01 2.4712e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0398789 2.2383e-01 lowCoverage 1.00000000 lowCoverage 0.718072 0.781145 -0.03066996 2 0.663167 0.72069 -0.0575248 0.5020738 2.9400e-01 lowCoverage 1.00000 1.000000 lowCoverage 0.8445678 4.1781e-01 lowCoverage 1.00000 1.0000000 lowCoverage -0.01077648 8.6791e-01 lowCoverage 1.0000000 lowCoverage 0.70718 0.707843 0.013134 6 0.671988 0.726219 -0.0542313 3.2186e-01 6.2523e-01 insignificant 1.0000e+00 1.000000 insignificant 8.7947e-01 0.5416615 insignificant 1.0000e+00 1.00000 insignificant -0.0460996 3.3955e-01 lowCoverage 1.00000000 lowCoverage 0.707182 0.781145 -0.0575995 2 0.671988 0.72069 -0.0487033 0.63185625 2.4844e-01 lowCoverage 1.0000000 1.000000 lowCoverage 0.7517739 0.3037825 lowCoverage 1.00000 1 lowCoverage -0.0169973 0.8155419 lowCoverage 1.00000 lowCoverage 0.707843 0.781145 -0.0683946 2 0.726219 0.720691 0.0055280 0.69606850 5.7497e-01 lowCoverage 1.000000 1.0000e+00 lowCoverage 0.46429584 9.1766e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.029102 6.3943e-01 lowCoverage 1.00000000 lowCoverage chr3 100519750 100520750 12998 ENSG00000207331 0.855613 436 11 0.698802 171 11 0.704434 122 7 0.8813797 220 11 0.687640 102 7 0.84904 405 11 0.624533 171 11 0.821174 162 11 0.751290 114 11 0.734419 108 11 0.827089 265 11 0.6683196 78 7 0.80887 138 11 0.885714 41 5 0.798998 168 11 0.6688312 53 5 0.756873 87 11 0.8132550 276 11 0.773760 163 11 0.865070 324 11 0.878788 56 7 0.631783 104 9 0.862949 288 11 0.6162698 64 5 0.865247 87 7 0.7423342 259 11 0.77349 122 10 0.838542 36 1 0.816410 160 11 0.84281 304 11 0.809565 200 11 0.783788 467 11 0.7676408 161 11 0.705636 135 11 0.781075 200 11 0.848052 89 7 0.608844 77 9 0.8162053 181 8 0.853071 384 11 0.921926 383 11 0.8648017 307 11 0.890061 298 11 0.880383 347 11 0.88056 0.781194 0.726538 0.890718 0.804563 0.869444 0.790695 0.862082 0.786194 0.853634 0.855411 0.743215 0.863219 0.871621 0.837826 0.7176996 0.789421 0.880140 0.836355 0.855191 0.898897 0.811736 0.862055 0.786590 0.844757 0.788267 0.829137 0.909620 0.817678 0.868351 0.845687 0.852124 0.7714956 0.7440957 0.810494 0.8852416 0.684454 0.881011 0.884738 0.928091 0.8960821 0.884259 0.900405 4 0.829079 0.823475 -0.00068178 11 0.69819 0.704632 -0.00644029 0.816575 0.7494111 insignificant 1 1 insignificant 0.9848480 0.452049 insignificant 1 1 insignificant -0.01474234 0.635134 insignificant 1 insignificant 0.829811 0.785291 0.0367325 11 0.710579 0.757335 -0.04675648 1.1307e-01 8.8014e-01 insignificant 1.0000e+00 1.0000000 insignificant 5.4639e-01 7.8061e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0191799 6.3917e-01 insignificant 1.00000000 insignificant 0.829900 0.898778 -0.06344445 11 0.693042 0.90469 -0.2116496 1.0000000 2.6559e-03 weaklyHypometh 1.00000 0.295103 insignificant 1.0000000 2.8667e-04 weaklyHypometh 1.00000 0.0813095 weaklyHypometh -0.10829336 5.1282e-05 weaklyHypometh 0.0073261 weaklyHypometh 0.82386 0.785291 0.036877 11 0.748672 0.757335 -0.0086637 8.0875e-02 9.6261e-01 insignificant 8.4245e-01 1.000000 insignificant 3.8668e-01 0.9134077 insignificant 1.0000e+00 1.00000 insignificant 0.0339222 4.4976e-01 insignificant 1.00000000 insignificant 0.824463 0.898778 -0.0634032 11 0.784196 0.90469 -0.1204959 0.99999856 5.8096e-05 weaklyHypometh 1.0000000 0.058096 weaklyHypometh 0.9999787 0.0431809 weaklyHypometh 1.00000 1 insignificant -0.0935510 0.0043354 weaklyHypometh 0.39413 insignificant 0.785459 0.898778 -0.1016782 11 0.758383 0.904692 -0.1463088 0.99997844 2.7861e-04 weaklyHypometh 1.000000 8.1344e-03 weaklyHypometh 0.99991875 3.9775e-03 weaklyHypometh 1.00000 1.1720e-01 insignificant -0.127473 1.3479e-02 weaklyHypometh 0.43481542 insignificant chr3 102843850 102844850 13081 ENSG00000212319 0.795279 88 4 0.774879 214 5 0.776807 95 5 0.8539496 93 3 0.866667 51 4 0.849060 168 4 0.851852 55 4 0.840999 126 5 0.744373 69 5 0.8712281 67 4 0.933934 193 5 0.5536508 28 4 0.909945 114 5 0.9166667 26 2 0.8579532 55 5 0.5803571 20 2 0.698077 46 3 0.9450292 62 4 0.8992461 99 5 0.821082 108 5 0.950000 38 3 0.8988095 27 3 0.876667 70 5 0.9800000 57 4 0.952381 26 3 0.9127273 206 5 0.771104 46 5 0.761667 39 4 0.879717 113 5 0.8842857 210 5 0.9088685 199 5 0.857966 173 5 0.8050420 171 5 0.8857143 68 5 0.924211 140 4 0.7053571 31 1 0.763095 73 5 0.9040191 178 5 0.738861 86 3 0.902266 96 5 0.8421053 96 3 0.811538 30 4 0.933515 93 3 0.8531227 0.788745 0.847285 0.9305032 0.8601533 0.857624 0.909749 0.8778499 0.7952964 0.8188143 0.9176763 0.5363985 0.9682231 0.8786503 0.9181959 0.7142857 0.691866 0.9143645 0.9497923 0.9080273 0.928161 0.8667214 0.877833 0.967816 0.9347817 0.9097850 0.8042245 0.782759 0.877957 0.9423919 0.9485505 0.875875 0.8440463 0.8210181 0.874571 0.6302806 0.712662 0.8689912 0.837809 0.976445 0.9110708 0.9232538 0.904728 1 0.851435 0.907807 -0.05818773 5 0.841874 0.897551 -0.0556776 0.999243 0.00209330 weaklyHypometh 1 0.52333 insignificant 0.980728 0.0166530 weaklyHypometh 1 1.00000 insignificant -0.06913099 0.0310092 lowCoverage 1 lowCoverage 0.851435 0.880484 -1.6647e-02 5 0.841874 0.861043 -0.0191691 2.6347e-01 4.6721e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant 1.6186e-01 3.2741e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant -0.0141881 7.4744e-01 lowCoverage 1.0000e+00 lowCoverage 0.851435 0.912718 -0.04222339 3 0.841874 0.839913 0.0019602 7.4014e-01 1.0584e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.1351e-01 0.08744701 lowCoverage 1.0000e+00 1.000000 lowCoverage -0.02860558 0.51161630 lowCoverage 1.000000 lowCoverage 0.907807 0.880484 0.0388579 5 0.897551 0.861043 3.6508e-02 1.1709e-02 6.2953e-01 weaklyHypermeth 2.0908e-01 1.0000000 insignificant 1.1211e-02 0.45087687 weaklyHypermeth 2.6693e-01 1.00000 insignificant 5.4943e-02 2.1136e-01 lowCoverage 1.0000e+00 lowCoverage 0.907807 0.912718 0.00154458 3 0.897551 0.839913 0.0576378 2.4158e-01 7.4920e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 4.6564e-01 3.4726e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 0.04052541 3.3806e-01 lowCoverage 1.000000 lowCoverage 0.880484 0.912718 -0.0599270 3 0.861043 0.839913 0.0211293 5.3287e-01 4.6283e-02 lowCoverage 1.000000 8.2649e-01 lowCoverage 0.5924463 1.3629e-03 lowCoverage 1.00000 6.9480e-02 lowCoverage -0.0144175 7.7724e-01 lowCoverage 1.000000 lowCoverage chr3 102908050 102909050 13083 RPL24 ENSG00000114391 0.735184 127 6 0.641475 104 6 0.572996 75 6 0.6776042 87 6 0.676054 74 5 0.767104 104 6 0.788042 84 6 0.721591 94 6 0.906338 74 3 0.8426194 72 6 0.748467 151 6 0.6100289 55 3 0.929012 72 5 0.7777778 9 0 0.8586065 89 6 0.5861514 50 3 0.662062 38 3 0.9045455 93 6 0.6343305 83 6 0.913911 81 5 0.796296 36 3 0.8000000 20 2 0.873694 96 6 0.5482955 41 3 0.800000 21 2 0.7370879 126 6 0.757738 41 6 0.761111 31 3 0.863690 53 6 0.8288462 97 6 0.8678439 126 6 0.708132 154 6 0.7456495 72 6 0.8809066 70 6 0.796940 99 6 0.6500000 20 2 0.515972 67 6 0.6605421 69 6 0.787322 141 6 0.722457 139 5 0.7873932 91 5 0.847222 80 6 0.882738 136 6 0.8004184 0.785396 0.771528 0.7918750 0.6982423 0.798672 0.786009 0.8045996 0.8262875 0.7704187 0.9025351 0.6444805 0.8326389 0.7832314 0.7882106 0.7340378 0.602904 0.7826389 0.7892771 0.8716028 0.675000 0.8088358 0.848433 0.774621 0.6923393 0.8338580 0.7285119 0.778333 0.859048 0.7950000 0.8457190 0.814911 0.7660417 0.7636905 0.788838 0.7029458 0.685556 0.7359625 0.808868 0.859401 0.8473825 0.9418981 0.832857 2 0.794300 0.804038 -0.01077627 6 0.789276 0.828602 -0.0393261 0.948566 0.60439493 insignificant 1 1.00000 insignificant 0.992758 0.5321989 insignificant 1 1.00000 insignificant -0.03086630 0.4053565 lowCoverage 1 lowCoverage 0.793532 0.720403 7.3533e-02 6 0.710254 0.701396 0.0088580 5.3219e-05 8.0290e-01 weaklyHypermeth 1.5653e-03 1.00000000 weaklyHypermeth 6.1523e-03 7.1988e-01 weaklyHypermeth 2.1215e-01 1.0000000 insignificant 0.0393599 5.1891e-01 lowCoverage 1.0000e+00 lowCoverage 0.793789 0.826235 -0.04570557 5 0.742448 0.814651 -0.0722029 9.2694e-01 2.5485e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.2974e-01 0.02482366 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.05773136 0.15225846 lowCoverage 1.000000 lowCoverage 0.803337 0.720403 0.0718617 6 0.764327 0.701396 6.2931e-02 1.0925e-03 9.9062e-01 weaklyHypermeth 2.6013e-02 1.0000000 weaklyHypermeth 3.9417e-03 0.99429690 weaklyHypermeth 1.2318e-01 1.00000 insignificant 7.0226e-02 2.6443e-01 lowCoverage 1.0000e+00 lowCoverage 0.803571 0.826235 -0.03426336 5 0.790513 0.814651 -0.0241377 9.0011e-01 4.7812e-01 insignificant 1.0000e+00 1.00000000 insignificant 9.3058e-01 5.1944e-01 insignificant 1.0000e+00 1.000000 insignificant -0.02686507 4.9268e-01 lowCoverage 1.000000 lowCoverage 0.720403 0.825939 -0.0979964 5 0.701396 0.791482 -0.0900863 9.9902e-01 1.4286e-03 weaklyHypometh 1.000000 4.2018e-02 weaklyHypometh 0.9996998 1.0335e-03 weaklyHypometh 1.00000 6.0795e-02 weaklyHypometh -0.0970913 1.4147e-01 insignificant 1.000000 insignificant chr3 103035750 103036750 13086 NFKBIZ ENSG00000144802 0.814955 246 6 0.665357 128 6 0.627302 82 6 0.8199626 138 6 0.658721 58 6 0.816474 278 7 0.716429 80 6 0.777426 92 6 0.599046 68 6 0.8108405 91 6 0.808014 219 6 0.7735390 44 4 0.805623 81 6 0.8037037 25 3 0.8686268 137 6 0.8106952 50 4 0.562500 54 5 0.7173764 158 6 0.7901864 124 6 0.656043 215 6 0.614583 38 3 0.8361111 48 5 0.737424 147 6 0.9747899 35 2 0.852976 53 6 0.7603853 151 6 0.569524 65 4 0.869444 28 1 0.677207 75 5 0.7330024 153 6 0.8359864 182 6 0.706095 290 8 0.8115395 86 4 0.5051677 132 6 0.661950 183 6 0.7486111 45 4 0.645657 81 6 0.6275884 127 6 0.813484 227 6 0.767905 225 6 0.8385277 165 6 0.921843 154 6 0.660435 162 6 0.8672819 0.770404 0.663943 0.8378637 0.7295912 0.887758 0.851379 0.8087916 0.6415504 0.8248488 0.8505170 0.9272202 0.8026314 0.8145836 0.8959261 0.8473185 0.849711 0.8345802 0.8148486 0.8826211 0.724470 0.7948940 0.840438 0.922475 0.8310418 0.8462346 0.7885959 0.845183 0.749094 0.8600284 0.8476667 0.861885 0.7675489 0.7150489 0.756070 0.7921484 0.788745 0.7125811 0.884218 0.883593 0.9260217 0.9234027 0.912669 2 0.816723 0.821344 0.00280650 6 0.746900 0.723960 0.0229402 0.478699 0.70175500 insignificant 1 1.00000 insignificant 0.687188 0.1069748 insignificant 1 1.00000 insignificant -0.01881974 0.6321512 lowCoverage 1 lowCoverage 0.816723 0.741590 8.3938e-02 6 0.746900 0.625427 0.1214734 6.0043e-05 1.0000e+00 weaklyHypermeth 1.7155e-03 1.00000000 weaklyHypermeth 1.1069e-02 9.9876e-01 weaklyHypermeth 3.5158e-01 1.0000000 insignificant 0.0783888 1.4074e-01 insignificant 1.0000e+00 insignificant 0.816723 0.867095 -0.05733014 6 0.746900 0.782632 -0.0357323 9.7563e-01 1.5268e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9341e-01 0.00199328 weaklyHypometh 1.0000e+00 0.398657 insignificant -0.05529763 0.28815158 insignificant 1.000000 insignificant 0.821344 0.741590 0.0813294 6 0.723960 0.625427 9.8533e-02 1.2633e-04 9.9996e-01 weaklyHypermeth 3.8281e-03 1.0000000 weaklyHypermeth 2.6563e-03 0.99995286 weaklyHypermeth 8.8542e-02 1.00000 weaklyHypermeth 9.7209e-02 1.0208e-01 lowCoverage 1.0000e+00 lowCoverage 0.821344 0.867095 -0.05901864 6 0.723960 0.782632 -0.0586725 9.9293e-01 1.0003e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant 9.8496e-01 2.7711e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.03647788 5.1938e-01 lowCoverage 1.000000 lowCoverage 0.741590 0.867095 -0.1373122 6 0.625427 0.782632 -0.1572057 1.0000e+00 1.0560e-07 weaklyHypometh 1.000000 9.6001e-06 weaklyHypometh 0.9999925 7.3784e-05 weaklyHypometh 1.00000 7.3784e-03 weaklyHypometh -0.1336864 5.6164e-02 insignificant 1.000000 insignificant chr3 107160950 107161950 13148 CBLB ENSG00000114423 0.599781 76 5 0.658978 115 6 0.551940 52 5 0.7297802 91 5 0.713672 66 8 0.712509 115 6 0.635011 111 9 0.741480 105 9 0.583321 90 9 0.7246914 48 5 0.580027 182 8 0.5555556 35 2 0.765028 94 9 0.7552608 101 8 0.7162698 81 8 0.5000000 16 0 0.608974 45 3 0.6834944 94 8 0.6785714 44 5 0.692593 78 6 0.606250 41 4 0.8750000 16 0 0.649417 77 8 0.4425926 52 5 0.681217 60 5 0.6847444 102 7 0.406349 64 6 0.444444 22 2 0.614887 67 5 0.6312108 92 5 0.7026184 69 6 0.629940 79 7 0.5240441 125 9 0.6277778 76 7 0.656605 82 5 0.6666667 6 0 0.458754 64 2 0.4866883 91 5 0.478571 64 8 0.686756 118 9 0.7528350 141 9 0.742725 47 5 0.632328 109 9 0.5384186 0.613263 0.548894 0.7669239 0.6837939 0.714109 0.647143 0.7325414 0.5436354 0.7557920 0.6434864 0.5328014 0.7550337 0.7546897 0.6793313 0.4946809 0.734598 0.6369488 0.6781915 0.7730496 0.553216 0.7519717 0.684599 0.507092 0.6143617 0.6643032 0.4710740 0.379433 0.599662 0.6359917 0.6605941 0.601469 0.6231260 0.6488840 0.624766 0.5759382 0.515716 0.6960423 0.493009 0.710839 0.7257352 0.7513931 0.644921 0 0.671141 0.638327 0.03801120 5 0.655787 0.674209 -0.0184229 0.207433 0.94329462 insignificant 1 1.00000 insignificant 0.140339 0.9925975 insignificant 1 1.00000 insignificant 0.04529099 0.2924343 insignificant 1 insignificant 0.671141 0.616253 6.3706e-02 5 0.655787 0.518584 0.1372030 3.1549e-03 9.9920e-01 weaklyHypermeth 7.3370e-02 1.00000000 weaklyHypermeth 4.2588e-02 9.9294e-01 weaklyHypermeth 1.0000e+00 1.0000000 insignificant 0.0892577 6.4690e-02 lowCoverage 1.0000e+00 lowCoverage 0.671141 0.684760 -0.01284653 8 0.655787 0.704545 -0.0487579 7.4375e-01 3.2706e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.6744e-01 0.59745012 insignificant 1.0000e+00 1.000000 insignificant 0.00070371 0.98988913 insignificant 1.000000 insignificant 0.638327 0.616253 0.0302758 5 0.674209 0.518584 1.5563e-01 1.4564e-01 9.7404e-01 insignificant 1.0000e+00 1.0000000 insignificant 3.6535e-01 0.83797404 insignificant 1.0000e+00 1.00000 insignificant 4.3967e-02 4.2136e-01 lowCoverage 1.0000e+00 lowCoverage 0.638327 0.684760 -0.05363893 5 0.674209 0.704545 -0.0303351 9.6435e-01 1.8581e-01 insignificant 1.0000e+00 1.00000000 insignificant 9.9575e-01 1.6170e-01 insignificant 1.0000e+00 1.000000 insignificant -0.04458728 4.9481e-01 insignificant 1.000000 insignificant 0.616253 0.684760 -0.0834294 5 0.518584 0.704545 -0.1859609 9.9576e-01 2.8405e-02 weaklyHypometh 1.000000 5.9177e-01 insignificant 0.9946185 9.6961e-02 insignificant 1.00000 1.0000e+00 insignificant -0.0885540 1.9399e-01 lowCoverage 1.000000 lowCoverage chr3 108632250 108633250 13182 CCDC54 ENSG00000138483 0.025705 1055 41 0.010875 1108 41 0.021915 1403 41 0.0091089 850 33 0.034727 1332 37 0.050677 1418 41 0.013039 1258 38 0.045128 1215 38 0.033646 1252 38 0.0350082 1820 38 0.019460 1255 38 0.0028491 1621 39 0.030588 1278 40 0.0053611 916 27 0.0129571 1841 39 0.0082442 1394 43 0.037028 648 26 0.0036656 969 35 0.0262293 1157 37 0.046660 964 39 0.045371 435 28 0.0244722 739 25 0.042571 859 41 0.0340944 456 31 0.026720 434 24 0.0449134 1602 41 0.061854 1369 31 0.052830 789 36 0.013217 998 39 0.0845576 1537 42 0.0329538 1384 41 0.039205 1128 38 0.0096102 888 41 0.0130241 790 38 0.031884 440 21 0.0117647 178 13 0.060619 829 41 0.0322417 1204 41 0.080491 1648 37 0.024188 1126 38 0.0279482 1174 34 0.012938 1121 33 0.057074 1267 36 0.0090488 0.018927 0.031080 0.0109948 0.0296764 0.030034 0.012067 0.0111744 0.0093511 0.0087706 0.0088927 0.0023821 0.0222132 0.0064213 0.0079782 0.0111615 0.058251 0.0068886 0.0189600 0.0427316 0.011909 0.0191351 0.039844 0.018636 0.0190494 0.0250945 0.0217339 0.025853 0.013271 0.0140221 0.0228261 0.018135 0.0119071 0.0142536 0.031751 0.0180787 0.036875 0.0048756 0.028013 0.015917 0.0052421 0.0094736 0.023236 21 0.013372 0.021491 -0.00492661 38 0.028243 0.047542 -0.0192994 0.992133 0.41622906 insignificant 1 1.00000 insignificant 0.936366 0.5530392 insignificant 1 1.00000 insignificant -0.01825314 0.0097984 weaklyHypometh 1 insignificant 0.013376 0.017102 8.9617e-05 38 0.029270 0.049242 -0.0199723 6.9926e-01 3.3964e-01 insignificant 1.0000e+00 1.00000000 insignificant 7.1781e-01 9.5315e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0028804 7.4945e-01 insignificant 1.0000e+00 insignificant 0.013383 0.015152 -0.00215114 37 0.030958 0.073030 -0.0420714 9.4523e-01 8.6577e-03 weaklyHypometh 1.0000e+00 8.6577e-01 insignificant 9.6391e-01 0.50150517 insignificant 1.0000e+00 1.000000 insignificant -0.01688451 0.24933831 insignificant 1.000000 insignificant 0.021489 0.017094 0.0063849 40 0.048391 0.048363 2.8324e-05 7.2260e-01 9.5315e-01 insignificant 1.0000e+00 1.0000000 insignificant 8.7652e-01 0.99863344 insignificant 1.0000e+00 1.00000 insignificant 1.5373e-02 1.4277e-01 insignificant 1.0000e+00 insignificant 0.021447 0.015152 0.00006842 37 0.049710 0.073030 -0.0233202 9.7145e-01 6.9057e-01 insignificant 1.0000e+00 1.00000000 insignificant 9.9263e-01 9.4255e-01 insignificant 1.0000e+00 1.000000 insignificant 0.00136863 9.2275e-01 insignificant 1.000000 insignificant 0.017169 0.015152 -0.0069460 37 0.052083 0.073030 -0.0209468 1.0000e+00 9.1506e-01 insignificant 1.000000 1.0000e+00 insignificant 1.0000000 9.8855e-01 insignificant 1.00000 1.0000e+00 insignificant -0.0140041 3.7275e-01 insignificant 1.000000 insignificant chr3 109171550 109172550 13186 BBX ENSG00000114439 0.827273 50 5 0.833333 8 0 0.888889 8 0 0.9055556 43 5 0.666667 8 0 0.831278 40 3 0.833333 5 0 0.966667 29 3 0.822222 14 2 0.7857143 19 3 0.771062 40 3 NA 0 0 0.681818 28 3 NA 0 0 0.9166667 12 1 0.7500000 4 0 0.500000 14 2 0.5343137 39 3 1.0000000 7 0 0.745299 41 3 0.944444 8 1 0.7166667 24 2 0.600000 43 3 0.7666667 14 2 1.000000 17 3 0.8124542 49 5 0.511111 37 3 0.904762 16 2 0.657143 16 2 0.7547619 48 5 0.7183333 39 4 0.769231 56 3 0.1611111 36 3 0.0833333 23 2 0.083333 42 2 0.0666667 35 5 0.083333 15 2 0.0000000 48 3 0.625000 18 1 0.747619 28 2 0.8365801 44 4 0.730159 25 3 0.455357 76 5 0.8073593 0.833333 0.888889 0.8425926 0.6666667 0.718797 0.833333 0.9666667 0.8222222 0.7857143 0.7710623 NA 0.6818182 NA 0.9166667 0.7611989 0.500000 0.5343137 1.0000000 0.7452991 0.944444 0.7166667 0.666667 0.766667 1.0000000 0.7350427 0.5111111 0.904762 0.657143 0.6865079 0.6555556 0.865385 0.1611111 0.0833333 0.043333 0.0000000 0.083333 0.0000000 0.708333 0.662698 0.7752525 0.7301587 0.446429 0 0.762836 0.741144 0.01933342 3 0.822646 0.761832 0.0608136 0.270558 0.85415932 lowCoverage 1 1.00000 lowCoverage 0.088517 0.9859007 lowCoverage 1 1.00000 lowCoverage 0.02926284 0.5741127 lowCoverage 1 lowCoverage 0.762836 0.075377 7.0420e-01 3 0.822646 0.083589 0.7390565 2.4503e-23 1.0000e+00 lowCoverage 2.4503e-21 1.00000000 lowCoverage 4.0278e-09 1.0000e+00 lowCoverage 5.7540e-07 1.0000000 lowCoverage 0.7125977 9.8152e-15 lowCoverage 3.2717e-12 lowCoverage 0.762836 0.643979 0.11030947 3 0.822646 0.646990 0.1756560 2.0722e-02 9.9832e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 1.5087e-02 0.99943094 lowCoverage 1.0000e+00 1.000000 lowCoverage 0.11328432 0.16875209 lowCoverage 1.000000 lowCoverage 0.741144 0.075377 0.6806651 3 0.761832 0.083589 6.7824e-01 8.6919e-22 1.0000e+00 lowCoverage 9.6576e-20 1.0000000 lowCoverage 7.2575e-09 1.00000000 lowCoverage 1.4515e-06 1.00000 lowCoverage 6.8333e-01 1.5579e-10 lowCoverage 5.1929e-08 lowCoverage 0.741144 0.643979 0.10002090 3 0.761832 0.646990 0.1148425 7.5864e-02 9.9397e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 1.8846e-01 9.7692e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 0.08402149 3.0879e-01 lowCoverage 1.000000 lowCoverage 0.075377 0.643979 -0.5685044 5 0.083589 0.646990 -0.5634005 1.0000e+00 3.8038e-12 hypomethylated 1.000000 7.6076e-10 hypomethylated 0.9999999 5.0576e-06 hypomethylated 1.00000 1.2644e-03 hypomethylated -0.5993134 3.8554e-04 lowCoverage 0.096385 lowCoverage chr3 114838150 114839150 13309 ENSG00000209204 0.803913 122 5 0.766842 75 5 0.443978 57 5 0.8574617 104 5 0.608791 59 5 0.706056 90 5 0.746667 30 3 0.622004 89 5 0.685455 51 5 0.6000000 30 5 0.797335 148 5 0.6944444 14 0 0.854482 62 5 0.8111111 33 5 0.8615385 60 5 0.4533333 17 1 0.800000 9 0 0.8133070 117 5 0.8011905 58 5 0.815600 114 5 0.866667 16 1 0.9226190 44 5 0.785714 74 5 0.9142857 45 5 0.904762 30 4 0.7115942 112 5 0.807143 28 1 0.761905 25 1 0.664589 62 5 0.7819514 82 5 0.9030141 82 5 0.789960 148 5 0.7595732 72 5 0.6688889 46 5 0.774510 89 5 1.0000000 2 0 0.756746 26 3 0.7301056 93 5 0.736364 63 5 0.813302 115 5 0.7199230 86 5 0.846160 77 5 0.864864 132 5 0.8141868 0.751711 0.664286 0.8697366 0.6681590 0.738104 0.769547 0.7689018 0.6948373 0.6493827 0.8236991 0.6851852 0.8440657 0.8196159 0.8793922 0.4773663 0.864198 0.8233787 0.8207182 0.8074573 0.876543 0.9120370 0.822751 0.927690 0.9118166 0.7335455 0.8073192 0.953704 0.707306 0.7951637 0.8757970 0.807980 0.7237340 0.6975309 0.785161 NA 0.731834 0.7522205 0.780584 0.829841 0.7443437 0.8554577 0.885091 0 0.769978 0.806150 -0.03025164 5 0.617739 0.753387 -0.1356482 0.972634 0.06279041 insignificant 1 1.00000 insignificant 0.999945 0.0022629 weaklyHypometh 1 0.75431 insignificant -0.09067479 0.0207343 lowCoverage 1 lowCoverage 0.770553 0.743902 3.2038e-02 5 0.720696 0.774078 -0.0533823 2.5118e-01 7.3699e-01 insignificant 1.0000e+00 1.00000000 insignificant 3.4068e-01 7.4466e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0544617 3.3994e-01 lowCoverage 1.0000e+00 lowCoverage 0.771772 0.809725 -0.04677034 5 0.764835 0.810582 -0.0457475 9.8279e-01 9.6692e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7930e-01 0.11361888 insignificant 1.0000e+00 1.000000 insignificant -0.06894712 0.11188479 lowCoverage 1.000000 lowCoverage 0.807278 0.743902 0.0619315 5 0.767841 0.774078 -6.2371e-03 1.9920e-03 7.8695e-01 weaklyHypermeth 4.3304e-02 1.0000000 weaklyHypermeth 6.2980e-03 0.98759598 weaklyHypermeth 1.8307e-01 1.00000 insignificant 3.6213e-02 5.0856e-01 lowCoverage 1.0000e+00 lowCoverage 0.809264 0.809725 -0.01928147 5 0.796409 0.810582 -0.0141733 5.4983e-01 2.5604e-01 insignificant 1.0000e+00 1.00000000 insignificant 2.0654e-01 9.2778e-01 insignificant 1.0000e+00 1.000000 insignificant 0.02172767 5.7983e-01 lowCoverage 1.000000 lowCoverage 0.742331 0.809725 -0.0823538 5 0.728893 0.810582 -0.0816888 9.9871e-01 5.9724e-04 weaklyHypometh 1.000000 2.0595e-02 weaklyHypometh 0.9977485 1.6873e-02 weaklyHypometh 1.00000 4.8207e-01 insignificant -0.0144854 7.9751e-01 lowCoverage 1.000000 lowCoverage chr3 116859450 116860450 13333 GAP43 ENSG00000172020 0.045790 957 22 0.059079 794 22 0.013008 767 22 0.0066468 847 22 0.037198 779 22 0.091201 1220 22 0.012738 927 22 0.095797 763 22 0.010781 891 22 0.0063278 899 22 0.010987 932 22 0.0099998 561 22 0.007242 543 22 0.0059936 450 19 0.0091762 1020 22 0.0047968 835 22 0.115147 112 6 0.0093039 1545 22 0.0027829 676 22 0.052461 1017 22 0.013778 409 22 0.0068231 391 22 0.010897 615 25 0.0056443 409 22 0.075689 235 19 0.0060002 1005 22 0.050552 1130 22 0.021177 523 22 0.013587 595 21 0.0028518 1064 22 0.0057007 983 22 0.013376 936 22 0.0013587 632 22 0.0068142 528 22 0.120584 967 12 0.0000000 135 13 0.039177 676 23 0.0936108 1006 22 0.023024 1371 22 0.079198 885 22 0.1209335 540 22 0.046714 1061 22 0.010697 862 22 0.0125099 0.021049 0.015708 0.0043518 0.0082066 0.017770 0.016849 0.0139416 0.0113909 0.0093286 0.0154358 0.0087795 0.0069326 0.0075135 0.0083440 0.0062212 0.012518 0.0121911 0.0042879 0.0140503 0.022506 0.0128397 0.016726 0.010570 0.0088923 0.0096923 0.0068571 0.027875 0.018883 0.0042124 0.0071584 0.019862 0.0027372 0.0098444 0.005518 0.0016186 0.020773 0.0162902 0.010332 0.017717 0.0074579 0.0209254 0.016831 21 0.011735 0.013032 0.00075207 22 0.069727 0.030808 0.0389193 0.090387 0.99871751 insignificant 1 1.00000 insignificant 0.159677 0.9942250 insignificant 1 1.00000 insignificant 0.01148318 0.2623271 insignificant 1 insignificant 0.011685 0.012934 2.0559e-03 22 0.063668 0.061858 0.0018099 6.2211e-01 8.6956e-01 insignificant 1.0000e+00 1.00000000 insignificant 8.1829e-01 9.7427e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0132679 5.7708e-01 insignificant 1.0000e+00 insignificant 0.011679 0.011033 -0.00015656 22 0.063668 0.066198 -0.0025295 7.0989e-01 2.3030e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.8280e-01 0.62403437 insignificant 1.0000e+00 1.000000 insignificant -0.02579052 0.28019031 insignificant 1.000000 insignificant 0.013062 0.012941 0.0012437 22 0.032733 0.061858 -2.9125e-02 9.8457e-01 3.2041e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.9009e-01 0.70336648 insignificant 1.0000e+00 1.00000 insignificant -2.4751e-02 3.0673e-01 insignificant 1.0000e+00 insignificant 0.013161 0.011024 -0.00247176 22 0.037802 0.055101 -0.0172990 9.9883e-01 9.9473e-02 insignificant 1.0000e+00 1.00000000 insignificant 9.9989e-01 3.7174e-01 insignificant 1.0000e+00 1.000000 insignificant -0.03727370 1.3752e-01 insignificant 1.000000 insignificant 0.012437 0.010835 -0.0031849 22 0.042348 0.057580 -0.0152320 9.9969e-01 8.1808e-01 insignificant 1.000000 1.0000e+00 insignificant 0.9999976 9.7877e-01 insignificant 1.00000 1.0000e+00 insignificant -0.0125226 6.7741e-01 insignificant 1.000000 insignificant chr3 124585850 124586850 13455 SEC22A ENSG00000121542 0.912045 159 4 0.735157 100 5 0.676667 67 5 0.8095671 129 5 0.803457 63 4 0.837903 177 5 0.920635 46 5 0.905025 70 5 0.817483 43 2 0.8928571 25 1 0.840418 127 5 0.8560440 41 5 0.770833 21 1 0.5625000 30 2 0.7833333 29 2 0.7149123 24 1 NA 0 0 0.7353463 143 4 0.8939542 77 4 0.878632 94 4 0.800000 31 3 0.6509804 34 3 0.851622 60 5 0.9392857 34 2 0.760945 139 4 0.7871795 80 5 0.728114 48 4 0.699231 57 4 0.622159 52 4 0.7016667 83 5 0.8857544 81 5 0.864924 111 4 0.3302448 82 5 0.5892857 27 2 0.690476 43 2 0.3982456 87 3 0.466227 83 5 0.3863043 92 5 0.797818 102 4 0.587010 54 4 0.6872742 73 4 0.553247 55 3 0.744552 111 5 0.9536921 0.661601 0.760638 0.8824721 0.8639418 0.897958 0.912530 0.9185620 0.7796459 0.7750760 0.9201283 0.8685215 0.7460106 0.8169326 0.8503546 0.7575588 NA 0.7067080 0.8779551 0.9280936 1.000000 0.5694618 0.953952 0.945441 0.8338615 0.7776869 0.7761866 0.825696 0.884429 0.8484043 0.9034267 0.820841 0.6152358 0.6816109 0.868288 0.7872340 0.781821 0.7796022 0.987484 0.815603 0.6094225 0.7811550 0.825059 1 0.816382 0.792593 0.02591843 5 0.850566 0.660904 0.1896612 0.363491 0.95181735 insignificant 1 1.00000 insignificant 0.335977 0.9010858 insignificant 1 1.00000 insignificant 0.03340291 0.3566437 lowCoverage 1 lowCoverage 0.816257 0.403382 4.1426e-01 5 0.820679 0.393508 0.4271708 2.8594e-22 9.9152e-01 hypermethylated 2.5994e-20 1.00000000 hypermethylated 3.0296e-07 9.0958e-01 hypermethylated 3.0296e-05 1.0000000 hypermethylated 0.3309274 1.1336e-03 lowCoverage 7.0851e-02 lowCoverage 0.816257 0.643038 0.12671213 4 0.820679 0.720645 0.1000336 5.0261e-04 9.5783e-01 lowCoverage 5.0261e-02 1.0000e+00 lowCoverage 1.9962e-03 0.99810628 lowCoverage 2.4260e-01 1.000000 lowCoverage 0.13374460 0.04014173 lowCoverage 1.000000 lowCoverage 0.793572 0.403382 0.3774974 5 0.793085 0.393508 3.9958e-01 2.3898e-13 9.9839e-01 hypermethylated 1.9227e-11 1.0000000 hypermethylated 2.9119e-06 0.99037040 hypermethylated 2.4266e-04 1.00000 hypermethylated 2.9752e-01 1.6568e-03 lowCoverage 7.8897e-02 lowCoverage 0.793572 0.643038 0.08316446 4 0.793085 0.720645 0.0724401 4.7316e-02 9.2103e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 2.0230e-02 9.8844e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 0.10034169 1.0523e-01 lowCoverage 1.000000 lowCoverage 0.403382 0.643038 -0.3526396 4 0.393508 0.720645 -0.3271372 9.8642e-01 4.4185e-07 lowCoverage 1.000000 3.3989e-05 lowCoverage 0.9777500 1.2428e-03 lowCoverage 1.00000 6.9047e-02 lowCoverage -0.1971828 2.3929e-02 lowCoverage 0.797618 lowCoverage chr3 124806150 124807150 13461 PTPLB ENSG00000206527 0.812991 75 5 0.816797 96 6 0.806972 67 5 0.7999524 119 5 0.761905 49 5 0.777058 127 5 0.720000 31 2 0.730357 89 5 0.666667 39 5 0.6785714 22 0 0.602142 167 5 0.5000000 9 0 0.813333 52 5 0.9333333 22 2 0.5860235 64 5 0.7321429 24 2 0.888889 8 0 0.6002694 111 5 0.8829874 88 5 0.655271 129 5 0.748611 41 5 0.6666667 39 5 0.836134 60 5 0.7776483 61 5 0.798889 30 4 0.7507163 111 5 0.779444 59 4 0.714286 25 2 0.774725 60 2 0.8860187 111 5 0.8413084 110 5 0.839276 135 5 0.5187818 81 5 0.5411932 53 5 0.809913 90 5 0.7083333 12 0 0.472491 55 3 0.8331222 125 5 0.853741 73 5 0.869773 94 5 0.8609744 93 5 0.825455 68 5 0.818850 89 5 0.8015785 0.753281 0.755346 0.7990869 0.7864078 0.759374 0.753398 0.7497457 0.9029126 0.5752427 0.8271662 0.6747573 0.7831715 0.8996764 0.8286303 0.6074896 0.827588 0.8261633 0.7823714 0.7825453 0.864617 0.7961165 0.717875 0.861667 0.7931499 0.8213965 0.8018608 0.768377 0.805327 0.8196629 0.8199489 0.904306 0.7183475 0.6808252 0.796846 0.6472492 0.687536 0.7956216 0.752890 0.831686 0.8129865 0.8434834 0.846107 2 0.784582 0.815914 -0.03021623 5 0.732904 0.746291 -0.0133864 0.886759 0.20723672 insignificant 1 1.00000 insignificant 0.979853 0.1897737 insignificant 1 1.00000 insignificant -0.04619395 0.1443078 lowCoverage 1 lowCoverage 0.785352 0.742788 4.2352e-02 5 0.740264 0.650478 0.0897859 7.1014e-02 9.8522e-01 insignificant 1.0000e+00 1.00000000 insignificant 9.7388e-02 9.8741e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0909774 2.3011e-01 lowCoverage 1.0000e+00 lowCoverage 0.785662 0.829736 -0.03841675 5 0.735448 0.884102 -0.1486532 9.9573e-01 7.6971e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9781e-01 0.15369650 insignificant 1.0000e+00 1.000000 insignificant -0.10747562 0.00064692 lowCoverage 0.107820 lowCoverage 0.814593 0.742788 0.0710677 5 0.718101 0.650478 6.7623e-02 4.2224e-02 9.8798e-01 weaklyHypermeth 6.8103e-01 1.0000000 insignificant 1.3650e-02 0.99662030 weaklyHypermeth 3.1745e-01 1.00000 insignificant 1.3717e-01 8.6296e-02 lowCoverage 1.0000e+00 lowCoverage 0.818071 0.829736 -0.01409068 5 0.762030 0.884102 -0.1220718 9.6119e-01 2.6028e-01 insignificant 1.0000e+00 1.00000000 insignificant 9.2610e-01 6.5153e-01 insignificant 1.0000e+00 1.000000 insignificant -0.06128166 8.4972e-03 lowCoverage 0.905311 lowCoverage 0.741463 0.829327 -0.0865063 5 0.622043 0.867545 -0.2455016 9.9987e-01 2.4078e-03 weaklyHypometh 1.000000 6.3362e-02 weaklyHypometh 0.9999750 6.3761e-03 weaklyHypometh 1.00000 1.9925e-01 insignificant -0.1984530 2.6366e-02 lowCoverage 0.850511 lowCoverage chr3 125000950 125001950 13481 PTPLB ENSG00000206527 0.804252 530 10 0.830432 446 10 0.763189 318 10 0.6805956 319 9 0.768134 186 10 0.738669 550 10 0.900017 348 10 0.794690 319 10 0.805101 315 10 0.8801016 277 10 0.887431 386 10 0.8556058 175 10 0.703305 377 10 0.7692409 151 8 0.7367383 379 10 0.7626075 165 10 0.542795 138 6 0.5359887 502 9 0.6980437 370 10 0.756440 354 10 0.751865 160 8 0.2571588 117 6 0.710342 304 10 0.6184177 175 10 0.703259 249 6 0.6810431 569 10 0.838041 303 10 0.902608 148 10 0.835509 342 10 0.8092610 562 10 0.7683929 514 10 0.930466 471 10 0.0324452 458 10 0.2063184 317 10 0.178552 565 6 0.1228234 83 1 0.090993 309 10 0.0422617 575 10 0.189851 556 10 0.223592 411 10 0.1342406 378 8 0.423395 363 9 0.342251 349 10 0.7817573 0.780101 0.723275 0.6556825 0.7295145 0.726446 0.851784 0.7594899 0.7808724 0.8494030 0.8761719 0.7811920 0.6833180 0.7423442 0.7030237 0.6440373 0.493959 0.5697194 0.7508379 0.7040377 0.829169 0.4195241 0.756656 0.679860 0.6888265 0.7490136 0.8331489 0.856685 0.808618 0.8289712 0.8600344 0.898978 0.0319537 0.1598155 0.117338 0.1555037 0.056213 0.0331760 0.158669 0.240810 0.1467282 0.3208857 0.281497 7 0.756135 0.806031 -0.04748122 10 0.804001 0.807853 -0.0038520 0.995816 0.03440593 weaklyHypometh 1 1.00000 insignificant 0.994003 0.3442586 insignificant 1 1.00000 insignificant 0.02680517 0.6346942 insignificant 1 insignificant 0.755690 0.076723 6.8793e-01 10 0.773848 0.089800 0.6840475 1.9187e-95 1.0000e+00 hypermethylated 1.9187e-92 1.00000000 hypermethylated 1.1895e-23 1.0000e+00 hypermethylated 1.1895e-20 1.0000000 hypermethylated 0.6484366 1.1088e-09 hypermethylated 1.5840e-07 hypermethylated 0.755987 0.219844 0.51747196 10 0.773848 0.300895 0.4729528 8.0155e-68 1.0000e+00 hypermethylated 8.0155e-65 1.0000e+00 hypermethylated 9.8996e-23 1.00000000 hypermethylated 9.8996e-20 1.000000 hypermethylated 0.49800314 0.00020691 hypermethylated 0.049938 hypermethylated 0.805989 0.076723 0.7414476 10 0.793677 0.089800 7.0388e-01 1.9275e-61 1.0000e+00 hypermethylated 1.9275e-58 1.0000000 hypermethylated 1.0344e-19 1.00000000 hypermethylated 1.0344e-16 1.00000 hypermethylated 6.2163e-01 1.4270e-08 hypermethylated 2.0386e-06 hypermethylated 0.805833 0.219737 0.56949683 10 0.740557 0.279402 0.4611547 1.8822e-43 1.0000e+00 hypermethylated 1.8822e-40 1.00000000 hypermethylated 1.6413e-16 1.0000e+00 hypermethylated 1.6413e-13 1.000000 hypermethylated 0.47119797 4.1891e-05 hypermethylated 0.020946 hypermethylated 0.076422 0.219298 -0.1602285 10 0.075824 0.234391 -0.1585664 1.0000e+00 1.9746e-08 weaklyHypometh 1.000000 2.1940e-06 weaklyHypometh 0.9999999 2.9414e-05 weaklyHypometh 1.00000 3.8144e-03 weaklyHypometh -0.1504334 4.4356e-02 weaklyHypometh 1.000000 insignificant chr3 125975150 125976150 13527 UMPS ENSG00000114491 0.947515 234 6 0.901453 150 6 0.963095 117 6 0.9390787 124 6 0.921504 119 6 0.912790 240 6 0.913663 190 6 0.943936 135 6 0.903399 128 6 0.9359858 100 6 0.938860 222 6 0.9497982 123 6 0.970599 134 6 1.0000000 3 0 0.9223420 151 6 0.8772000 78 5 0.935253 102 6 0.9212164 205 6 0.9507937 120 6 0.962836 175 6 0.966162 102 6 0.9576923 76 6 0.942846 172 6 0.9695767 77 5 0.858618 70 6 0.9230159 179 6 0.940543 102 6 0.937956 77 6 0.952581 109 6 0.9650133 206 6 0.9450479 169 6 0.939647 260 6 0.9869048 133 6 0.9916667 141 6 0.833333 158 2 0.9696970 61 5 1.000000 81 6 0.9636809 146 6 0.975291 256 6 0.974893 239 6 0.9606492 145 5 0.937338 237 6 0.955325 210 5 0.9478661 0.913356 0.954625 0.9411139 0.9315800 0.906356 0.908984 0.9509148 0.9071995 0.9477394 0.9500552 0.9537437 0.9674972 NA 0.9191746 0.8922309 0.948592 0.9079599 0.9648180 0.9616641 0.952833 0.9577504 0.934522 0.961348 0.8880045 0.9046252 0.9509112 0.928871 0.950171 0.9695682 0.9491670 0.943172 0.9888865 0.9916918 0.966616 0.9494644 1.000000 0.9799546 0.970376 0.987731 0.9507628 0.9532823 0.952020 5 0.931930 0.941213 -0.01061197 6 0.931117 0.942668 -0.0115505 0.657397 0.09460330 insignificant 1 1.00000 insignificant 0.946393 0.1467978 insignificant 1 1.00000 insignificant -0.00599236 0.5757660 insignificant 1 insignificant 0.931930 0.979167 -5.3060e-02 6 0.931117 0.979704 -0.0485872 9.9999e-01 7.3562e-07 weaklyHypometh 1.0000e+00 0.00024521 weaklyHypometh 1.0000e+00 5.0983e-06 weaklyHypometh 1.0000e+00 0.0050983 weaklyHypometh -0.0219812 4.3589e-01 insignificant 1.0000e+00 insignificant 0.931930 0.965961 -0.02563518 6 0.931117 0.959216 -0.0280991 9.9715e-01 1.8017e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9645e-01 0.06040013 insignificant 1.0000e+00 1.000000 insignificant -0.02513325 0.02116702 weaklyHypometh 1.000000 insignificant 0.941213 0.979167 -0.0390947 6 0.942668 0.979704 -3.7037e-02 9.8931e-01 3.0336e-05 weaklyHypometh 1.0000e+00 0.0101120 weaklyHypometh 9.9714e-01 0.00045442 weaklyHypometh 1.0000e+00 0.22721 insignificant -1.5989e-02 5.7270e-01 insignificant 1.0000e+00 insignificant 0.941213 0.965961 -0.02231030 6 0.942668 0.959216 -0.0165487 9.5640e-01 8.9318e-02 insignificant 1.0000e+00 1.00000000 insignificant 9.1869e-01 2.7156e-01 insignificant 1.0000e+00 1.000000 insignificant -0.01914089 1.0562e-01 insignificant 1.000000 insignificant 0.979167 0.965961 0.0252591 6 0.979704 0.959216 0.0204881 7.2456e-03 9.9543e-01 weaklyHypermeth 1.000000 1.0000e+00 insignificant 0.0052372 9.9870e-01 weaklyHypermeth 0.87286 1.0000e+00 insignificant -0.0031520 9.0906e-01 insignificant 1.000000 insignificant chr3 126329050 126330050 13558 ENSG00000199327 0.816699 682 21 0.726449 383 19 0.848060 233 15 0.8351409 622 21 0.845700 183 12 0.807920 691 24 0.790362 233 14 0.856183 280 15 0.796389 193 13 0.8490840 184 15 0.864687 576 21 0.7594419 172 10 0.809081 229 15 0.8400000 73 5 0.8514390 206 16 0.7584325 75 5 0.722481 874 11 0.8931749 549 21 0.8792421 236 18 0.781407 551 21 0.883159 136 12 0.8141568 242 12 0.837271 383 21 0.8715368 113 13 0.892832 165 11 0.8992553 457 21 0.817938 220 13 0.774820 107 5 0.786783 218 16 0.7840897 469 24 0.8881959 460 20 0.768596 727 21 0.6449132 271 14 0.7837261 226 15 0.792208 437 21 0.7751647 113 10 0.748259 205 13 0.7515086 439 21 0.817502 574 21 0.807673 701 21 0.8291517 594 21 0.901619 416 21 0.866276 647 21 0.8520282 0.811034 0.806121 0.8573863 0.9305676 0.849419 0.868290 0.8810868 0.8200268 0.8782821 0.8481435 0.8362735 0.8518497 0.8103185 0.8690174 0.8578111 0.864018 0.9431330 0.8709520 0.8588567 0.891893 0.8587360 0.852873 0.851272 0.9043448 0.9140500 0.8797403 0.820309 0.852892 0.8606299 0.9047130 0.875762 0.7873345 0.7432138 0.797153 0.8067630 0.727206 0.7930319 0.907785 0.851299 0.8638008 0.9356289 0.924403 5 0.854037 0.869895 -0.01694409 20 0.793768 0.814355 -0.0205869 0.998736 0.13346072 insignificant 1 1.00000 insignificant 0.995199 0.1355848 insignificant 1 1.00000 insignificant -0.01831764 0.3218739 insignificant 1 insignificant 0.854037 0.774690 7.9984e-02 20 0.793768 0.745697 0.0480717 3.3518e-10 9.9599e-01 weaklyHypermeth 1.7641e-08 1.00000000 weaklyHypermeth 7.0947e-05 9.9786e-01 weaklyHypermeth 3.9415e-03 1.0000000 weaklyHypermeth 0.0672720 2.6869e-02 weaklyHypermeth 8.6675e-01 insignificant 0.854118 0.888472 -0.03014010 20 0.807991 0.806641 0.0013506 1.0000e+00 8.5664e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9831e-01 0.33384943 insignificant 1.0000e+00 1.000000 insignificant -0.02787569 0.21367858 insignificant 1.000000 insignificant 0.869824 0.775015 0.0959680 20 0.807215 0.755146 5.2069e-02 6.8293e-12 9.9992e-01 weaklyHypermeth 3.7941e-10 1.0000000 weaklyHypermeth 1.1456e-06 0.99992896 weaklyHypermeth 1.1856e-04 1.00000 weaklyHypermeth 8.5590e-02 9.4870e-03 weaklyHypermeth 3.3882e-01 insignificant 0.869895 0.888737 -0.01299735 20 0.814355 0.829355 -0.0149996 9.9332e-01 5.0065e-01 insignificant 1.0000e+00 1.00000000 insignificant 8.0491e-01 8.9418e-01 insignificant 1.0000e+00 1.000000 insignificant -0.00955804 6.8196e-01 insignificant 1.000000 insignificant 0.774690 0.888737 -0.1106518 20 0.745697 0.829355 -0.0836581 1.0000e+00 2.3943e-08 weaklyHypometh 1.000000 2.3943e-06 weaklyHypometh 0.9999967 1.6472e-05 weaklyHypometh 1.00000 2.7454e-03 weaklyHypometh -0.0951477 8.2196e-03 weaklyHypometh 0.456644 insignificant chr3 127087142 127088142 13579 ENSG00000221681 0.933354 194 6 0.835690 135 6 0.700030 157 6 0.8003609 206 4 0.973846 60 6 0.963580 103 5 0.931595 148 6 0.939583 100 6 0.894020 157 6 0.8037023 92 6 0.882542 180 6 0.7900783 106 6 0.937205 128 6 NA 0 0 0.9205449 180 6 0.8081633 49 6 0.749610 93 6 0.8704454 194 4 0.9162934 118 6 0.911154 147 6 0.742412 55 5 0.7912648 95 4 0.922448 164 6 0.9041667 58 6 0.920330 69 4 0.9650845 166 6 0.875431 120 6 0.909933 90 6 0.933007 103 6 0.9450781 149 6 0.9356112 156 6 0.923449 202 6 0.0247427 178 6 0.0813776 124 6 0.166667 372 3 0.4402174 90 4 0.042291 85 6 0.1417317 205 6 0.818958 200 6 0.868737 203 6 0.9124705 154 5 0.894745 177 6 0.540902 205 5 0.9436395 0.799943 0.653876 0.9094516 0.9600762 0.949202 0.925163 0.9424092 0.8569402 0.9441233 0.8711273 0.9006093 0.9574377 NA 0.8994692 0.8865629 0.767755 0.8223660 0.8966827 0.9070608 0.878826 0.8974473 0.897279 0.900866 0.8900011 0.9321965 0.8606260 0.923692 0.939575 0.9408157 0.9541215 0.887482 0.0310138 0.0516572 0.128713 0.4315622 0.034105 0.1127995 0.863627 0.886206 0.9248979 0.8950103 0.678217 4 0.881037 0.915207 -0.03436547 6 0.805048 0.884924 -0.0798757 0.999945 0.23877562 insignificant 1 1.00000 insignificant 0.992879 0.5289017 insignificant 1 1.00000 insignificant -0.02567763 0.3316814 insignificant 1 insignificant 0.881589 0.086338 7.6491e-01 6 0.816735 0.111065 0.7056701 3.5136e-65 1.0000e+00 hypermethylated 1.7568e-62 1.00000000 hypermethylated 3.4106e-16 1.0000e+00 hypermethylated 1.7053e-13 1.0000000 hypermethylated 0.7221691 3.7693e-05 hypermethylated 3.4551e-03 hypermethylated 0.881983 0.835996 0.04184542 6 0.850053 0.628586 0.2214676 2.7970e-01 9.5238e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.2558e-01 0.99277812 insignificant 1.0000e+00 1.000000 insignificant 0.06451100 0.40707811 insignificant 1.000000 insignificant 0.914909 0.086338 0.7947604 6 0.835605 0.111065 7.2454e-01 6.2103e-54 1.0000e+00 hypermethylated 2.0701e-51 1.0000000 hypermethylated 6.6979e-13 1.00000000 hypermethylated 3.3489e-10 1.00000 hypermethylated 7.4785e-01 2.8038e-05 hypermethylated 2.5489e-03 hypermethylated 0.916433 0.835996 0.07756617 6 0.946211 0.628586 0.3176258 3.5356e-05 1.0000e+00 weaklyHypermeth 3.9284e-03 1.00000000 weaklyHypermeth 1.0312e-02 9.9976e-01 weaklyHypermeth 7.6882e-01 1.000000 insignificant 0.09018863 2.6400e-01 insignificant 1.000000 insignificant 0.086502 0.839785 -0.7120891 6 0.129576 0.847640 -0.7180646 1.0000e+00 3.5024e-25 hypomethylated 1.000000 1.7512e-22 hypomethylated 1.0000000 1.7502e-08 hypomethylated 1.00000 1.7502e-05 hypomethylated -0.6576581 6.9299e-05 hypomethylated 0.034650 hypomethylated chr3 127468542 127469542 13587 ALDH1L1 ENSG00000144908 0.142159 761 28 0.048042 854 33 0.144904 805 32 0.0562239 660 20 0.042462 926 33 0.138905 940 28 0.097441 1103 32 0.144472 854 32 0.059365 1125 32 0.0601908 871 29 0.104709 1059 30 0.0782978 981 30 0.056837 1129 32 0.0539792 225 14 0.0702499 994 32 0.0821451 976 29 0.070627 972 29 0.0884026 919 26 0.1041547 783 31 0.097450 745 28 0.075261 362 29 0.0709493 490 14 0.080850 648 29 0.0856542 342 29 0.113298 342 18 0.0632310 1129 33 0.062584 482 29 0.066105 390 27 0.092088 789 32 0.0710346 1129 32 0.0704024 1088 33 0.103257 716 30 0.0291402 814 33 0.0313058 690 32 0.099420 579 24 0.0459184 139 13 0.106103 445 29 0.0591078 772 32 0.184845 960 22 0.088673 726 30 0.1138582 670 19 0.120230 685 21 0.095255 932 25 0.0758960 0.032810 0.133474 0.0567581 0.0396384 0.066897 0.086694 0.0784151 0.0504503 0.0816160 0.0984408 0.0633753 0.0449673 0.0466262 0.0586252 0.0610893 0.052720 0.0816979 0.0641182 0.0630185 0.063482 0.0543067 0.047495 0.047583 0.0617685 0.0421707 0.0852118 0.072688 0.063605 0.0587741 0.0825992 0.109844 0.0158225 0.0304856 0.077398 0.0215459 0.065341 0.0431486 0.150498 0.065476 0.1068562 0.0960671 0.091383 14 0.067828 0.061978 0.00408267 32 0.099200 0.105082 -0.0058823 0.144781 0.99235633 insignificant 1 1.00000 insignificant 0.095949 0.9998797 insignificant 1 1.00000 insignificant 0.00749133 0.4067815 insignificant 1 insignificant 0.067757 0.040721 2.4997e-02 32 0.095787 0.080402 0.0153851 2.0439e-07 1.0000e+00 weaklyHypermeth 7.8612e-06 1.00000000 weaklyHypermeth 1.9291e-06 1.0000e+00 weaklyHypermeth 1.6076e-04 1.0000000 weaklyHypermeth 0.0252183 1.4450e-01 insignificant 1.0000e+00 insignificant 0.067555 0.068462 -0.02711710 20 0.084784 0.108305 -0.0235208 9.0539e-02 5.2066e-08 weaklyHypometh 1.0000e+00 5.2066e-05 weaklyHypometh 2.1449e-01 0.02022622 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.03352123 0.12571569 insignificant 1.000000 insignificant 0.061827 0.040710 0.0210036 32 0.080251 0.078441 1.8103e-03 3.5314e-03 9.9999e-01 weaklyHypermeth 7.2070e-02 1.0000000 weaklyHypermeth 6.7110e-02 0.99999999 insignificant 1.0000e+00 1.00000 insignificant 1.7727e-02 2.6535e-01 insignificant 1.0000e+00 insignificant 0.061540 0.068462 -0.02949147 20 0.068656 0.108305 -0.0396488 9.2131e-01 2.8170e-04 weaklyHypometh 1.0000e+00 0.07042413 weaklyHypometh 9.8913e-01 4.3979e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.04101257 7.2783e-02 insignificant 1.000000 insignificant 0.040245 0.068497 -0.0528354 20 0.053792 0.114494 -0.0607018 9.9992e-01 4.4989e-05 weaklyHypometh 1.000000 1.9561e-03 weaklyHypometh 0.9999994 2.2901e-03 weaklyHypometh 1.00000 9.6115e-02 weaklyHypometh -0.0587395 2.7468e-02 weaklyHypometh 0.855289 insignificant chr3 127739442 127740442 13591 CHST13 ENSG00000180767 0.899636 489 11 0.825735 549 12 0.805315 347 12 0.9177088 469 11 0.903914 174 11 0.917471 513 11 0.819151 333 12 0.806659 365 12 0.876060 283 10 0.9222624 259 11 0.788971 468 12 0.8956408 135 8 0.845681 340 11 0.8000000 12 1 0.9062953 224 11 0.8382199 91 7 0.688580 103 9 0.8118901 441 11 0.8190426 355 10 0.867145 385 11 0.893163 165 11 0.8015289 192 10 0.890869 306 11 0.9514132 147 10 0.869568 171 10 0.9040734 630 12 0.894236 184 11 0.834287 125 10 0.824637 425 10 0.9100746 667 12 0.8769314 606 12 0.855772 542 11 0.6721348 560 12 0.7558102 333 11 0.734330 488 12 0.7194815 159 10 0.742384 302 12 0.7749056 629 11 0.850874 544 11 0.866853 513 12 0.7592874 415 10 0.784407 389 10 0.767829 486 10 0.8789293 0.825802 0.771704 0.9026311 0.8945807 0.908093 0.811792 0.8309707 0.8595040 0.9093801 0.8464577 0.8641555 0.8413548 0.8863999 0.8948819 0.8007924 0.696749 0.7970957 0.8314228 0.8692727 0.882194 0.7598259 0.853920 0.928797 0.8664263 0.8878976 0.8405404 0.851251 0.879352 0.9061675 0.8841824 0.927345 0.6616209 0.7528703 0.732293 0.6586609 0.766924 0.8079227 0.826592 0.822532 0.7553858 0.7804916 0.769979 7 0.855068 0.890358 -0.03238065 11 0.854264 0.890700 -0.0364358 0.999960 0.00037626 weaklyHypometh 1 0.37626 insignificant 0.997324 0.0142583 weaklyHypometh 1 1.00000 insignificant -0.02777723 0.1294552 insignificant 1 insignificant 0.855068 0.760016 1.1799e-01 11 0.854264 0.727222 0.1270419 1.0545e-10 9.9900e-01 weaklyHypermeth 5.8584e-09 1.00000000 weaklyHypermeth 1.4090e-05 9.9094e-01 weaklyHypermeth 8.8062e-04 1.0000000 weaklyHypermeth 0.1145945 3.8908e-05 weaklyHypermeth 3.4551e-03 weaklyHypermeth 0.855068 0.794631 0.05353928 11 0.854264 0.822469 0.0317957 3.8915e-04 8.6789e-01 weaklyHypermeth 4.3239e-02 1.0000e+00 weaklyHypermeth 6.9227e-04 0.95315324 weaklyHypermeth 9.8896e-02 1.000000 weaklyHypermeth 0.04191867 0.14721754 insignificant 1.000000 insignificant 0.890358 0.760016 0.1397002 12 0.890700 0.727222 1.6348e-01 1.1508e-12 1.0000e+00 weaklyHypermeth 7.6721e-11 1.0000000 weaklyHypermeth 1.3041e-06 0.99988866 weaklyHypermeth 1.1856e-04 1.00000 weaklyHypermeth 1.4237e-01 7.3905e-06 weaklyHypermeth 8.2117e-04 weaklyHypermeth 0.890358 0.794631 0.08429516 11 0.890700 0.822469 0.0682315 4.3939e-07 9.9977e-01 weaklyHypermeth 8.7878e-05 1.00000000 weaklyHypermeth 7.2252e-05 9.9847e-01 weaklyHypermeth 1.8063e-02 1.000000 weaklyHypermeth 0.06969590 3.0088e-02 weaklyHypermeth 1.000000 insignificant 0.760016 0.794631 -0.0603643 11 0.727222 0.822469 -0.0952462 9.6710e-01 6.6368e-03 weaklyHypometh 1.000000 1.6187e-01 insignificant 0.8884692 3.3503e-02 weaklyHypometh 1.00000 7.6144e-01 insignificant -0.0726759 2.8225e-02 weaklyHypometh 0.855289 insignificant chr3 128993442 128994442 13626 MGLL ENSG00000074416 0.843332 640 11 0.784092 649 11 0.692289 342 11 0.8347923 430 11 0.844840 350 10 0.891108 428 10 0.883097 255 10 0.794472 477 10 0.732267 425 10 0.8110564 378 11 0.654641 760 11 0.9010071 213 8 0.765909 432 10 0.8815705 286 10 0.7556636 476 10 0.7293972 256 7 0.998680 1839 6 0.6822566 549 10 0.8049696 412 10 0.855335 378 10 0.701034 151 10 0.8813653 159 7 0.868167 316 11 0.7329385 270 11 0.812607 125 8 0.8508261 657 10 0.943018 331 10 0.809403 235 9 0.725409 341 11 0.7441260 513 11 0.8532048 524 10 0.880500 501 10 0.6894274 514 11 0.6361783 261 10 0.723981 652 10 0.5944444 69 7 0.664798 321 10 0.7600211 577 10 0.768502 441 10 0.892350 470 11 0.9198720 357 10 0.970082 460 8 0.858727 450 11 0.8794349 0.834707 0.909878 0.9582889 0.8755287 0.936788 0.963564 0.8729958 0.9155321 0.9025399 0.9190805 0.8972513 0.9246311 0.9336313 0.9321299 0.8849223 0.997792 0.8192709 0.9011485 0.9204921 0.730284 0.9132141 0.916824 0.828592 0.8361939 0.9153156 0.9167951 0.908789 0.857365 0.8959821 0.9130595 0.977928 0.7956074 0.7943339 0.871693 0.6162719 0.883056 0.8534166 0.950354 0.896549 0.9553819 0.9610980 0.966351 8 0.910476 0.894737 0.00640886 10 0.747019 0.775562 -0.0285433 0.166749 0.03538986 inconclusive 1 1.00000 insignificant 0.207970 0.0805801 insignificant 1 1.00000 insignificant -0.00984452 0.7375978 insignificant 1 insignificant 0.911511 0.828321 7.7229e-02 10 0.776141 0.636488 0.1396533 2.0221e-07 9.9882e-01 weaklyHypermeth 7.8612e-06 1.00000000 weaklyHypermeth 1.1251e-02 8.8448e-01 weaklyHypermeth 3.5158e-01 1.0000000 insignificant 0.1288971 1.3662e-03 weaklyHypermeth 8.0365e-02 weaklyHypermeth 0.910476 0.935721 -0.03474025 10 0.747019 0.726069 0.0209496 8.7286e-01 1.3555e-03 weaklyHypometh 1.0000e+00 3.3888e-01 insignificant 9.7067e-01 0.00042994 weaklyHypometh 1.0000e+00 0.143313 insignificant -0.07486782 0.09557632 insignificant 1.000000 insignificant 0.896930 0.828321 0.0767960 10 0.802832 0.636488 1.6634e-01 2.0042e-06 9.8973e-01 weaklyHypermeth 7.4229e-05 1.0000000 weaklyHypermeth 9.8937e-03 0.88116882 weaklyHypermeth 2.4815e-01 1.00000 insignificant 1.3874e-01 1.0547e-03 weaklyHypermeth 6.1099e-02 weaklyHypermeth 0.894737 0.935721 -0.03983435 10 0.775562 0.726069 0.0494929 2.7182e-01 2.1231e-04 weaklyHypometh 1.0000e+00 0.07042413 weaklyHypometh 7.3790e-01 1.2706e-04 weaklyHypometh 1.0000e+00 0.063528 weaklyHypometh -0.06502330 1.4646e-01 insignificant 1.000000 insignificant 0.828321 0.936151 -0.1113167 10 0.636488 0.781920 -0.1454322 9.9932e-01 6.3372e-05 weaklyHypometh 1.000000 2.6405e-03 weaklyHypometh 0.9975947 4.4087e-04 weaklyHypometh 1.00000 2.7554e-02 weaklyHypometh -0.2037649 1.3809e-03 weaklyHypometh 0.125535 insignificant chr3 129017742 129018742 13628 MGLL ENSG00000074416 0.868171 194 5 0.821024 192 6 0.736308 83 6 0.9294580 217 5 0.809545 82 6 0.853162 278 6 0.832009 118 6 0.766489 179 6 0.828756 91 6 0.8712430 76 5 0.862997 258 6 0.6636364 35 4 0.746085 111 3 0.9396552 82 5 0.9301633 129 5 0.7777778 24 2 0.000000 1 0 0.8836177 191 5 0.7810891 225 6 0.872849 213 6 0.834266 49 4 0.8018831 98 5 0.937237 117 5 0.8971477 85 5 0.902246 203 5 0.8971619 231 6 0.782895 142 5 0.913194 42 3 0.760108 164 6 0.8691325 210 6 0.8176939 174 6 0.890729 192 6 0.7618635 160 6 1.0000000 83 5 0.998366 290 5 0.9434783 134 3 0.743171 134 6 0.9520493 157 6 0.912039 226 5 0.851345 163 5 0.8098065 179 5 0.867487 100 5 0.892809 179 5 0.8387005 0.828223 0.659461 0.8781351 0.7373185 0.815966 0.739134 0.7025059 0.7561418 0.8053135 0.8200571 0.6937662 0.7851444 0.8317241 0.8438843 0.5352381 NA 0.8814232 0.8136760 0.7923984 0.896703 0.8031901 0.899212 0.876320 0.8831885 0.8598682 0.7674078 0.818452 0.793708 0.8293811 0.7810872 0.842538 0.9219775 1.0000000 0.996583 0.9660870 0.905533 0.9661127 0.857734 0.837156 0.7948139 0.7817338 0.835830 2 0.820411 0.844666 -0.02206827 6 0.848873 0.862259 -0.0133856 0.801298 0.17857986 insignificant 1 1.00000 insignificant 0.872509 0.0429978 weaklyHypometh 1 1.00000 insignificant -0.06993956 0.1530521 lowCoverage 1 lowCoverage 0.820605 0.946708 -1.3003e-01 6 0.870463 0.907403 -0.0369401 9.0054e-01 2.5766e-06 weaklyHypometh 1.0000e+00 0.00051531 weaklyHypometh 9.3431e-01 1.7498e-05 weaklyHypometh 1.0000e+00 0.0087489 weaklyHypometh -0.1111195 1.0900e-01 lowCoverage 1.0000e+00 lowCoverage 0.820411 0.842975 -0.02220890 5 0.848873 0.883021 -0.0341479 9.7654e-01 5.2922e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8812e-01 0.01594919 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.07799564 0.11632465 lowCoverage 1.000000 lowCoverage 0.844757 0.946541 -0.1058038 6 0.881936 0.800260 8.1676e-02 9.9891e-01 8.6275e-06 weaklyHypometh 1.0000e+00 0.0043138 weaklyHypometh 9.9177e-01 0.00076462 weaklyHypometh 1.0000e+00 0.25487 insignificant -4.1180e-02 4.4383e-01 insignificant 1.0000e+00 insignificant 0.844666 0.842975 0.00237070 5 0.862259 0.883021 -0.0207623 4.2803e-01 1.1720e-01 insignificant 1.0000e+00 1.00000000 insignificant 2.5906e-01 7.0656e-02 insignificant 1.0000e+00 1.000000 insignificant -0.00805609 7.4511e-01 insignificant 1.000000 insignificant 0.947534 0.842975 0.1072911 5 0.933637 0.883021 0.0506156 7.4798e-05 6.4192e-01 weaklyHypermeth 0.024933 1.0000e+00 weaklyHypermeth 0.0041766 7.6891e-01 weaklyHypermeth 0.87286 1.0000e+00 insignificant 0.0331239 5.3698e-01 insignificant 1.000000 insignificant chr3 129706242 129707242 13654 GATA2 ENSG00000179348 0.935915 317 5 0.841657 231 5 0.878990 164 5 0.9556561 98 5 0.968452 56 3 0.903054 240 5 0.730827 92 5 0.951532 153 5 0.932900 126 5 0.9189841 113 5 0.880318 198 5 0.8275689 56 5 0.950664 212 5 NA 0 0 0.9605659 123 5 0.8000000 17 1 0.924206 48 5 0.9047084 179 5 0.9315310 159 5 0.901980 228 5 0.930097 80 5 0.8194566 76 5 0.906453 164 5 0.8343927 85 5 0.852727 69 5 0.9664422 246 5 0.879436 106 5 0.964532 70 5 0.832775 155 5 0.9655913 320 5 0.9255800 238 5 0.919754 325 5 0.8104072 223 5 0.9518182 140 5 1.000000 128 4 0.8916667 64 5 0.923137 77 5 0.9344876 256 5 0.896036 270 5 0.943159 277 5 0.9052100 194 5 0.874332 316 5 0.954066 213 5 0.9354236 0.849958 0.881349 0.9179142 0.9484608 0.923904 0.780292 0.9613525 0.9279346 0.9366170 0.9030886 0.8376448 0.9581944 NA 0.9676478 0.8590308 0.944112 0.9286620 0.9298236 0.9222929 0.940607 0.8262117 0.904270 0.853299 0.8828728 0.9726750 0.8884465 0.967145 0.855747 0.9590262 0.9303841 0.933082 0.8406467 0.9571152 0.988077 0.9269457 0.948173 0.9360508 0.911015 0.947717 0.9054878 0.8858324 0.968592 5 0.908541 0.921406 -0.01241986 5 0.907271 0.916232 -0.0089612 0.891474 0.37068003 insignificant 1 1.00000 insignificant 0.613191 0.7062280 insignificant 1 1.00000 insignificant 0.00020446 0.9923919 lowCoverage 1 lowCoverage 0.908541 0.927928 -1.8102e-02 5 0.907271 0.906089 0.0011813 4.7295e-01 3.2438e-01 insignificant 1.0000e+00 1.00000000 insignificant 9.7357e-01 1.8791e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0186119 5.4816e-01 lowCoverage 1.0000e+00 lowCoverage 0.908541 0.918110 -0.01144242 5 0.907271 0.908847 -0.0015765 3.9997e-01 5.3087e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.2348e-01 0.51006325 insignificant 1.0000e+00 1.000000 insignificant -0.01458646 0.49160414 lowCoverage 1.000000 lowCoverage 0.921406 0.927928 -0.0061729 5 0.916232 0.906089 1.0143e-02 4.4884e-01 6.4402e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.8093e-01 0.14546120 insignificant 1.0000e+00 1.00000 insignificant -1.8816e-02 5.5286e-01 lowCoverage 1.0000e+00 lowCoverage 0.921406 0.918110 0.00149481 5 0.916232 0.908847 0.0073847 2.1392e-01 7.7045e-01 insignificant 1.0000e+00 1.00000000 insignificant 6.1009e-01 6.5286e-01 insignificant 1.0000e+00 1.000000 insignificant -0.01479092 5.0773e-01 insignificant 1.000000 insignificant 0.927928 0.918110 0.0064221 5 0.906089 0.908847 -0.0027578 5.8033e-01 7.6499e-01 insignificant 1.000000 1.0000e+00 insignificant 0.3488323 7.9808e-01 insignificant 1.00000 1.0000e+00 insignificant 0.0040255 8.9682e-01 lowCoverage 1.000000 lowCoverage chr3 130045242 130046242 13671 ENSG00000172797 0.929938 219 7 0.871257 143 7 0.862776 78 6 0.9298246 139 7 0.963203 75 5 0.846440 292 7 0.897336 127 7 0.938359 128 7 0.917899 122 7 0.9031302 85 6 0.912420 189 7 0.8827839 72 6 0.949811 166 7 NA 0 0 0.8884971 95 7 0.7710884 43 5 0.770563 63 5 0.9251255 191 7 0.9624229 138 7 0.940515 276 7 0.896224 158 7 0.9471078 95 6 0.887063 255 7 0.9387779 93 7 0.974206 68 6 0.9200733 168 7 0.869898 113 7 0.846475 50 6 0.904609 92 6 0.9432083 231 7 0.9489456 229 7 0.894774 461 7 0.9690858 118 7 0.9098481 113 7 0.955357 114 2 0.9584416 36 3 0.979503 98 7 0.8903309 152 7 0.985103 147 7 0.944248 238 7 0.9420016 169 7 0.915132 198 7 0.970672 264 7 0.9281633 0.856900 0.852279 0.9271283 0.9577124 0.857911 0.921996 0.9294187 0.9027592 0.8942919 0.9182855 0.9160099 0.9488016 NA 0.8790242 0.7776347 0.817290 0.9312324 0.9552159 0.9375190 0.896627 0.9512247 0.899656 0.935197 0.9622609 0.9282871 0.8760295 0.843232 0.894008 0.9410723 0.9672570 0.889762 0.9715569 0.8926475 0.945849 0.9391952 0.982716 0.9081773 0.980615 0.953254 0.9515554 0.9036060 0.964527 5 0.906096 0.918033 -0.01129951 7 0.905921 0.914767 -0.0088463 0.637655 0.21069043 insignificant 1 1.00000 insignificant 0.624165 0.2659233 insignificant 1 1.00000 insignificant -0.01620712 0.3395163 insignificant 1 insignificant 0.906096 0.939778 -4.1775e-02 7 0.905921 0.944329 -0.0384079 9.7405e-01 7.2019e-04 weaklyHypometh 1.0000e+00 0.08002127 weaklyHypometh 9.9678e-01 1.0318e-03 weaklyHypometh 1.0000e+00 0.2063679 insignificant -0.0456880 3.3110e-02 weaklyHypometh 9.7384e-01 insignificant 0.906096 0.948819 -0.04211590 7 0.905921 0.948388 -0.0424668 9.9986e-01 3.8305e-03 weaklyHypometh 1.0000e+00 6.3842e-01 insignificant 9.9992e-01 0.00565528 weaklyHypometh 1.0000e+00 0.807897 insignificant -0.05335841 0.00905840 weaklyHypometh 0.823491 insignificant 0.918033 0.939778 -0.0257799 7 0.914767 0.944329 -2.9562e-02 9.6490e-01 7.0824e-03 weaklyHypometh 1.0000e+00 0.8852955 insignificant 9.9929e-01 0.00173990 weaklyHypometh 1.0000e+00 0.43498 insignificant -2.9481e-02 1.3179e-01 insignificant 1.0000e+00 insignificant 0.918033 0.948819 -0.03062581 7 0.914767 0.948388 -0.0336205 9.9578e-01 3.7656e-03 weaklyHypometh 1.0000e+00 0.70894363 insignificant 9.9914e-01 1.1601e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.03715128 4.4604e-02 weaklyHypometh 1.000000 insignificant 0.939778 0.948819 -0.0056841 7 0.944329 0.948388 -0.0040589 2.9233e-01 6.3840e-01 insignificant 1.000000 1.0000e+00 insignificant 0.2123861 7.7057e-01 insignificant 1.00000 1.0000e+00 insignificant -0.0076704 6.9438e-01 insignificant 1.000000 insignificant chr3 130828242 130829242 13703 PLXND1 ENSG00000004399 0.047543 1399 36 0.105793 1225 38 0.078188 1442 37 0.0625766 1228 32 0.044342 1123 36 0.056341 1863 39 0.061645 1359 37 0.032593 1234 38 0.053964 1366 35 0.0485700 1995 38 0.038787 1216 38 0.0183085 1533 32 0.014015 1338 37 0.0600899 808 18 0.0152892 1642 35 0.0178176 1420 37 0.019805 406 20 0.1163690 1775 36 0.0874243 1106 34 0.065248 1480 39 0.040625 670 38 0.0364279 893 39 0.098533 965 37 0.0524333 1103 41 0.036011 1653 36 0.0057481 1787 38 0.048889 1347 40 0.036473 932 43 0.039057 1073 37 0.0387173 1675 37 0.0530643 1601 38 0.075798 1571 36 0.0050878 905 38 0.0172733 872 34 0.048312 1985 33 0.0046765 1002 30 0.048977 753 41 0.1563947 1124 39 0.068881 1518 35 0.089843 1255 34 0.0878030 1225 34 0.038517 1384 33 0.074775 1004 37 0.0079614 0.018091 0.086102 0.0117557 0.0129152 0.016897 0.029334 0.0076999 0.0086783 0.0063634 0.0200561 0.0103127 0.0074018 0.0174348 0.0116639 0.0067988 0.017862 0.0240833 0.0134488 0.0093442 0.017268 0.0087267 0.043121 0.017124 0.0078242 0.0068965 0.0164746 0.010631 0.013239 0.0086070 0.0075852 0.031332 0.0051262 0.0101372 0.010201 0.0055670 0.018741 0.1425557 0.037230 0.035099 0.0069988 0.0220235 0.062480 33 0.020560 0.018625 0.00383701 36 0.112572 0.069170 0.0434015 0.101579 0.99798982 insignificant 1 1.00000 insignificant 0.398035 0.9759947 insignificant 1 1.00000 insignificant 0.00542065 0.5645068 insignificant 1 insignificant 0.020423 0.041259 -1.8085e-02 36 0.062249 0.071660 -0.0094111 4.5909e-01 4.2271e-01 insignificant 1.0000e+00 1.00000000 insignificant 1.6529e-01 9.9983e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0054485 8.3013e-01 insignificant 1.0000e+00 insignificant 0.020292 0.034612 -0.01547950 33 0.044915 0.068816 -0.0239009 9.9370e-01 1.4560e-04 weaklyHypometh 1.0000e+00 4.8533e-02 weaklyHypometh 9.9952e-01 0.00019927 weaklyHypometh 1.0000e+00 0.099637 weaklyHypometh -0.01972858 0.11693720 insignificant 1.000000 insignificant 0.018464 0.041259 -0.0220070 40 0.045264 0.071660 -2.6396e-02 6.7273e-01 8.0770e-02 insignificant 1.0000e+00 1.0000000 insignificant 3.9705e-01 0.96415864 insignificant 1.0000e+00 1.00000 insignificant 2.7867e-05 9.9912e-01 insignificant 1.0000e+00 insignificant 0.018230 0.034721 -0.01841671 34 0.036393 0.089520 -0.0531265 9.9994e-01 2.2585e-07 weaklyHypometh 1.0000e+00 0.00022585 weaklyHypometh 9.9999e-01 3.7951e-05 weaklyHypometh 1.0000e+00 0.037951 weaklyHypometh -0.02514922 5.6359e-02 insignificant 1.000000 insignificant 0.041075 0.034580 -0.0011782 34 0.054153 0.072509 -0.0183562 9.9324e-01 6.3687e-03 weaklyHypometh 1.000000 1.5922e-01 insignificant 0.9999999 2.8425e-03 weaklyHypometh 1.00000 1.0528e-01 insignificant -0.0251771 3.5253e-01 insignificant 1.000000 insignificant chr3 132128642 132129642 13745 ATP2C1 ENSG00000017260 0.793774 164 6 0.782681 133 6 0.787698 80 6 0.8188842 114 6 0.879932 70 6 0.895848 149 6 0.760522 88 4 0.869167 98 6 0.634028 65 6 0.8445076 63 4 0.818749 219 6 0.7500000 37 2 0.770316 87 5 0.7305556 31 3 0.7811158 94 6 0.5063131 42 4 0.803309 41 2 0.7964559 134 6 0.8321990 150 6 0.865731 125 6 0.805411 44 4 0.8928571 35 2 0.781211 87 6 0.5428571 47 4 0.810000 19 2 0.8416925 149 6 0.846542 61 4 0.783333 29 3 0.877291 151 6 0.8693550 163 6 0.8828739 139 6 0.866005 163 6 0.6331183 124 6 0.7482194 87 6 0.578039 125 6 0.6706349 22 1 0.723096 70 6 0.6851700 185 6 0.813078 138 6 0.828565 160 6 0.8279221 128 6 0.808946 110 6 0.817588 120 6 0.8695286 0.743602 0.793356 0.8974705 0.8045528 0.929972 0.825160 0.8939527 0.7590372 0.8883983 0.8627003 0.7815315 0.8588950 0.8241442 0.8491086 0.6579648 0.788876 0.8423967 0.8240939 0.8897840 0.851132 0.8238789 0.788972 0.801802 0.7387438 0.8675949 0.8419256 0.820270 0.931857 0.8670559 0.8917505 0.875202 0.6709162 0.7307548 0.551436 0.7456564 0.741593 0.6401562 0.855488 0.887445 0.8758994 0.8402574 0.878750 3 0.826109 0.852806 -0.02889179 6 0.869726 0.816780 0.0529468 0.854948 0.19252284 insignificant 1 1.00000 insignificant 0.897296 0.3997071 insignificant 1 1.00000 insignificant -0.03053002 0.3746450 lowCoverage 1 lowCoverage 0.825846 0.634584 1.8385e-01 6 0.804590 0.674666 0.1299236 6.5908e-08 9.9933e-01 weaklyHypermeth 2.8656e-06 1.00000000 weaklyHypermeth 1.2631e-03 9.9896e-01 weaklyHypermeth 4.6780e-02 1.0000000 weaklyHypermeth 0.1130429 4.1485e-03 weaklyHypermeth 1.9755e-01 insignificant 0.825933 0.836890 -0.01776894 6 0.832505 0.838893 -0.0063877 8.6596e-01 5.4985e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.9098e-01 0.70510865 insignificant 1.0000e+00 1.000000 insignificant -0.03313050 0.11608645 insignificant 1.000000 insignificant 0.853432 0.634584 0.2055223 6 0.836280 0.674666 1.6161e-01 1.9010e-08 9.9999e-01 hypermethylated 8.2654e-07 1.0000000 hypermethylated 3.1392e-04 0.99991644 hypermethylated 1.3080e-02 1.00000 hypermethylated 1.4357e-01 1.5824e-03 lowCoverage 7.8897e-02 lowCoverage 0.851989 0.836890 0.01159254 6 0.764431 0.838893 -0.0744622 4.0846e-01 6.1263e-01 insignificant 1.0000e+00 1.00000000 insignificant 4.0211e-01 7.0082e-01 insignificant 1.0000e+00 1.000000 insignificant -0.00260048 9.2641e-01 lowCoverage 1.000000 lowCoverage 0.634584 0.836641 -0.1923991 6 0.674666 0.812042 -0.1373760 9.9839e-01 2.9182e-05 weaklyHypometh 1.000000 1.3896e-03 weaklyHypometh 0.9998171 1.5286e-03 weaklyHypometh 1.00000 6.9480e-02 weaklyHypometh -0.1461734 1.9066e-03 weaklyHypometh 0.158885 insignificant chr3 133633542 133634542 13758 DNAJC13 ENSG00000138246 0.737632 207 6 0.614751 147 6 0.636426 115 6 0.6640724 145 6 0.805556 29 3 0.737739 270 6 0.699074 23 3 0.805665 57 3 0.660256 30 2 0.8750000 20 2 0.817742 129 3 0.7222222 11 0 0.777146 42 3 0.9090909 31 3 0.6404040 33 3 0.7000000 10 2 0.833333 6 0 0.6916981 144 6 0.8081761 77 3 0.691423 231 6 0.875000 16 1 0.7702020 32 3 0.682656 115 5 0.9523810 20 1 1.000000 9 0 0.7524172 213 5 0.791667 12 1 0.666667 9 0 0.797980 55 3 0.7010541 205 6 0.6888115 163 6 0.665096 257 5 0.6038356 126 6 0.6603175 47 3 0.727408 133 6 0.8333333 6 0 0.582540 54 3 0.7026225 137 5 0.743238 159 5 0.673760 175 6 0.6617934 113 6 0.655976 139 6 0.738592 152 6 0.9101852 0.719086 0.682540 0.8137566 0.8055556 0.851404 0.699074 0.8056653 0.6602564 0.8750000 0.8177424 0.7222222 0.7771465 0.9090909 0.6404040 0.7571164 0.846005 0.8569413 0.8081761 0.7985209 0.812740 0.7702020 0.818315 0.952381 1.0000000 0.8426722 0.7916667 0.666667 0.797980 0.8539601 0.7942896 0.788767 0.7187822 0.6603175 0.776984 0.8365588 0.582540 0.8115942 0.829911 0.752282 0.7116402 0.7846154 0.825879 0 0.718839 0.726040 -0.01213711 5 0.679056 0.697061 -0.0180050 0.815195 0.30194058 insignificant 1 1.00000 insignificant 0.839364 0.1281894 insignificant 1 1.00000 insignificant -0.03729042 0.3317362 lowCoverage 1 lowCoverage 0.718839 0.703777 2.4390e-02 5 0.679056 0.666296 0.0127602 7.8716e-03 3.8407e-01 weaklyHypermeth 1.6326e-01 1.00000000 insignificant 1.8790e-01 6.1397e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0563611 2.1541e-01 lowCoverage 1.0000e+00 lowCoverage 0.718839 0.688347 -0.01094015 5 0.679056 0.693963 -0.0149065 5.8747e-01 1.4703e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.5356e-01 0.25124882 insignificant 1.0000e+00 1.000000 insignificant 0.04669860 0.10457058 lowCoverage 1.000000 lowCoverage 0.726040 0.703777 0.0332916 5 0.697061 0.666296 3.0765e-02 3.0253e-02 8.4577e-01 weaklyHypermeth 5.0421e-01 1.0000000 insignificant 2.4399e-01 0.96516879 insignificant 1.0000e+00 1.00000 insignificant 9.3652e-02 8.2027e-02 lowCoverage 1.0000e+00 lowCoverage 0.726040 0.688347 -0.00448500 5 0.697061 0.693963 0.0030985 5.5704e-01 3.8473e-01 insignificant 1.0000e+00 1.00000000 insignificant 5.8436e-01 4.8702e-01 insignificant 1.0000e+00 1.000000 insignificant 0.08398902 4.1201e-02 lowCoverage 1.000000 lowCoverage 0.703777 0.688347 -0.0323521 5 0.666296 0.693963 -0.0276668 8.0898e-01 1.4203e-01 insignificant 1.000000 1.0000e+00 insignificant 0.9339840 1.1910e-01 insignificant 1.00000 1.0000e+00 insignificant -0.0096625 8.2407e-01 lowCoverage 1.000000 lowCoverage chr3 137841942 137842942 13832 ENSG00000200843 0.698402 487 13 0.627091 285 14 0.636870 210 13 0.7664531 284 13 0.687309 159 14 0.679270 569 13 0.715024 207 13 0.722883 250 15 0.644157 179 13 0.7404801 170 11 0.746203 426 15 0.6351801 122 9 0.580744 267 13 0.6595238 34 3 0.7238369 207 13 0.6841205 118 9 0.650566 113 8 0.7221766 287 13 0.7831164 369 13 0.749304 394 13 0.819848 98 9 0.7375782 147 13 0.783201 296 13 0.6719169 134 13 0.769364 115 10 0.7593855 385 15 0.826149 116 9 0.787157 91 10 0.580604 193 13 0.6519673 375 13 0.7493920 419 13 0.720657 648 13 0.6531820 246 12 0.7141034 189 13 0.779129 369 13 0.6697283 114 9 0.656612 182 13 0.7114829 401 13 0.830611 349 13 0.797774 376 13 0.7989176 309 15 0.757700 366 12 0.759577 341 15 0.7768325 0.673553 0.725854 0.7685642 0.7211627 0.740268 0.730736 0.7811642 0.7186313 0.8010446 0.7502272 0.6930999 0.7546670 0.7431474 0.7304059 0.7594390 0.715804 0.7635350 0.7771407 0.7511829 0.834072 0.7457771 0.775844 0.824554 0.7896686 0.7478987 0.8021629 0.804252 0.693699 0.7607740 0.7456855 0.761454 0.7076880 0.6652948 0.747655 0.7677273 0.684099 0.7022927 0.821675 0.793019 0.7917238 0.7769736 0.787959 7 0.738174 0.738135 -0.01032485 13 0.659899 0.695452 -0.0355536 0.972774 0.24965528 insignificant 1 1.00000 insignificant 0.996477 0.0674006 insignificant 1 1.00000 insignificant -0.04546601 0.0742655 insignificant 1 insignificant 0.738698 0.698667 3.6429e-02 13 0.721553 0.686868 0.0346851 9.1497e-03 9.7118e-01 weaklyHypermeth 1.7941e-01 1.00000000 insignificant 8.5774e-02 9.0968e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0047374 8.4106e-01 insignificant 1.0000e+00 insignificant 0.738698 0.807582 -0.04151879 13 0.721553 0.792900 -0.0713476 9.9998e-01 4.6352e-03 weaklyHypometh 1.0000e+00 6.6217e-01 insignificant 9.9999e-01 0.00763439 weaklyHypometh 1.0000e+00 0.954298 insignificant -0.09628030 0.00024969 weaklyHypometh 0.049938 weaklyHypometh 0.738784 0.698867 0.0491630 13 0.759891 0.705287 5.4604e-02 9.7316e-05 9.9302e-01 weaklyHypermeth 3.1392e-03 1.0000000 weaklyHypermeth 1.5211e-02 0.99918638 weaklyHypermeth 3.3803e-01 1.00000 insignificant 4.0729e-02 1.7610e-01 insignificant 1.0000e+00 insignificant 0.738610 0.807582 -0.03114825 13 0.744884 0.792900 -0.0480164 9.9968e-01 1.6542e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant 9.8624e-01 1.5800e-01 insignificant 1.0000e+00 1.000000 insignificant -0.05081429 5.9766e-02 insignificant 1.000000 insignificant 0.698667 0.807582 -0.0775453 13 0.686868 0.792900 -0.1060327 9.9994e-01 1.7925e-06 weaklyHypometh 1.000000 1.1950e-04 weaklyHypometh 0.9995915 1.4582e-03 weaklyHypometh 1.00000 6.9480e-02 weaklyHypometh -0.0915429 4.4732e-03 weaklyHypometh 0.279573 insignificant chr3 139982542 139983542 13867 ENSG00000203643 0.672962 159 5 0.625580 116 5 0.634722 43 5 0.7019608 129 5 0.611111 29 4 0.747431 106 5 0.726852 58 5 0.671746 82 5 0.555556 16 0 0.8000000 23 2 0.798505 138 5 0.6000000 8 0 0.713235 48 5 0.4599206 29 3 0.7277778 43 2 0.4444444 9 0 NA 0 0 0.7255563 289 4 0.7714286 49 5 0.573378 86 5 0.714815 29 2 0.7500000 8 0 0.955506 62 2 0.6256313 49 5 0.955740 91 2 0.7130004 77 5 0.858730 44 2 0.600000 18 2 0.686966 130 5 0.7792406 93 5 0.5299145 69 5 0.708889 97 5 0.5601370 70 5 0.5761905 88 5 0.781481 81 5 1.0000000 6 0 0.537406 64 5 0.4678241 84 5 0.618974 71 5 0.720076 125 5 0.6460317 111 5 0.817308 108 2 0.720805 113 5 0.8368030 0.801231 0.709375 0.8717320 0.8958333 0.816336 0.677083 0.8791667 0.7500000 0.8625000 0.8758388 0.5000000 0.7623162 0.5017361 0.8875000 0.7968146 NA 0.9200017 0.9107143 0.7476504 0.858333 0.7379123 0.875357 0.854640 0.9336097 0.7388664 0.8601190 0.800000 0.795673 0.8737162 0.8942308 0.891667 0.8171264 0.7964286 0.889583 0.8829600 0.674302 0.8291667 0.860577 0.850142 0.8224206 0.8389423 0.851510 0 0.773288 0.810952 -0.01881167 5 0.569462 0.597408 -0.0279462 0.999416 0.65555851 insignificant 1 1.00000 insignificant 0.996347 0.7467070 insignificant 1 1.00000 insignificant -0.07870271 0.0942144 lowCoverage 1 lowCoverage 0.774194 0.679389 4.4580e-02 5 0.687527 0.609272 0.0782547 1.0545e-01 9.7086e-01 insignificant 1.0000e+00 1.00000000 insignificant 9.8866e-02 8.8192e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0073269 9.3402e-01 lowCoverage 1.0000e+00 lowCoverage 0.774194 0.842803 -0.01888426 5 0.687527 0.745540 -0.0580136 8.2410e-01 4.4753e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.9833e-01 0.59650946 insignificant 1.0000e+00 1.000000 insignificant -0.04347229 0.32891373 lowCoverage 1.000000 lowCoverage 0.814474 0.679389 0.0580350 5 0.729446 0.609272 1.2017e-01 7.0384e-03 9.9580e-01 weaklyHypermeth 1.3535e-01 1.0000000 insignificant 2.2050e-02 0.96099902 weaklyHypermeth 4.7936e-01 1.00000 insignificant 8.6030e-02 3.6935e-01 lowCoverage 1.0000e+00 lowCoverage 0.814474 0.842803 -0.00085098 5 0.729446 0.745540 -0.0160942 2.8630e-01 7.0753e-01 insignificant 1.0000e+00 1.00000000 insignificant 4.6256e-01 6.1434e-01 insignificant 1.0000e+00 1.000000 insignificant 0.03523042 5.0545e-01 lowCoverage 1.000000 lowCoverage 0.679389 0.842803 -0.0542255 5 0.609272 0.745540 -0.1362682 9.8516e-01 1.2974e-01 insignificant 1.000000 1.0000e+00 insignificant 0.9395888 3.7383e-01 insignificant 1.00000 1.0000e+00 insignificant -0.0507992 5.8478e-01 lowCoverage 1.000000 lowCoverage chr3 139999242 140000242 13871 ENSG00000203643 0.790878 161 5 0.639157 102 5 0.673203 69 5 0.7990769 95 5 0.711111 32 3 0.780381 160 5 0.596491 67 3 0.498333 45 5 0.630769 61 5 0.7702020 53 5 0.738155 123 5 0.7200000 38 3 0.740000 76 5 NA 0 0 0.7124176 102 5 0.6400000 32 3 0.590000 23 3 0.6869565 88 5 0.7684555 69 5 0.731083 204 5 0.600000 53 5 0.7051282 116 5 0.781391 110 5 0.6565476 75 5 0.741538 42 3 0.6573935 88 5 0.603571 108 5 0.666300 58 5 0.615873 43 5 0.6546807 80 5 0.6417316 83 5 0.703182 213 5 0.7080702 77 5 0.7644307 66 5 0.766667 30 3 0.7589286 54 3 0.741851 57 5 0.6297386 62 5 0.806593 168 5 0.800476 142 5 0.7356303 119 5 0.691111 159 5 0.728305 171 5 0.7366261 0.553731 0.602409 0.7318873 0.6776486 0.708250 0.580404 0.4261143 0.5237030 0.7127966 0.6732535 0.6302326 0.6569767 NA 0.6352223 0.5244186 0.495349 0.5824065 0.6927565 0.6887339 0.483140 0.6075581 0.727123 0.610379 0.6560823 0.5572288 0.5084644 0.584366 0.517903 0.5746337 0.5543793 0.644813 0.6053652 0.7115623 0.806605 0.6799211 0.696049 0.5032110 0.742699 0.746216 0.6494284 0.6194767 0.660477 3 0.675625 0.636109 0.05081222 5 0.721419 0.677644 0.0437745 0.019610 0.97790517 weaklyHypermeth 1 1.00000 insignificant 0.058753 0.9370045 insignificant 1 1.00000 insignificant 0.02666938 0.2812447 lowCoverage 1 lowCoverage 0.675625 0.656069 6.2714e-04 5 0.721419 0.729232 -0.0078130 9.2514e-02 3.0812e-01 insignificant 1.0000e+00 1.00000000 insignificant 4.6579e-01 1.4139e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0326668 2.7003e-01 lowCoverage 1.0000e+00 lowCoverage 0.675625 0.678524 -0.02930202 5 0.721419 0.749872 -0.0284532 9.7230e-01 2.3639e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8134e-01 0.17162289 insignificant 1.0000e+00 1.000000 insignificant -0.05680880 0.07611821 lowCoverage 1.000000 lowCoverage 0.636109 0.656069 -0.0521971 5 0.677644 0.729232 -5.1588e-02 2.1629e-01 1.2746e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant 5.7210e-01 0.01375583 weaklyHypometh 1.0000e+00 1.00000 insignificant -5.9336e-02 5.0370e-02 lowCoverage 1.0000e+00 lowCoverage 0.636109 0.678524 -0.07873993 5 0.677644 0.749872 -0.0722277 9.9945e-01 4.2537e-03 weaklyHypometh 1.0000e+00 0.70894363 insignificant 9.9904e-01 2.0309e-03 weaklyHypometh 1.0000e+00 0.507720 insignificant -0.08347817 1.4906e-02 lowCoverage 1.000000 lowCoverage 0.656069 0.678524 -0.0301742 5 0.729232 0.749872 -0.0206402 7.1143e-01 1.4690e-01 insignificant 1.000000 1.0000e+00 insignificant 0.7595209 3.0117e-01 insignificant 1.00000 1.0000e+00 insignificant -0.0241420 4.5642e-01 lowCoverage 1.000000 lowCoverage chr3 140137042 140138042 13882 ENSG00000203643 0.017675 1179 27 0.018351 1322 23 0.026850 1219 23 0.0405977 975 25 0.015197 840 23 0.052661 1156 29 0.020502 1457 23 0.021084 912 23 0.056941 1355 23 0.0265242 1052 23 0.058127 1038 23 0.0406940 1162 22 0.012585 981 22 0.0766908 102 4 0.0570021 1168 22 0.0164723 1129 23 0.014832 1284 18 0.0393411 1739 18 0.0880125 1153 28 0.076746 929 27 0.025432 280 23 0.0416667 78 4 0.035086 958 29 0.0139069 369 22 0.058158 197 10 0.0174646 1638 29 0.053184 481 23 0.011364 187 20 0.030121 1103 22 0.0392874 1374 29 0.0171421 1522 29 0.015980 1186 28 0.0928364 838 23 0.1619618 893 23 0.106868 910 19 0.0178571 623 18 0.185787 303 20 0.0092244 1431 29 0.046316 1139 29 0.041165 1101 29 0.0075516 907 23 0.012541 1496 19 0.041596 778 21 0.0353301 0.023865 0.035611 0.0133284 0.0195795 0.034602 0.034353 0.0338924 0.0250077 0.0262767 0.0300597 0.0480104 0.0235293 0.0455458 0.0237747 0.0240140 0.031507 0.0217760 0.0354264 0.0144284 0.030475 0.0593523 0.041965 0.030343 0.0223963 0.0380536 0.0343948 0.024920 0.050346 0.0174130 0.0364533 0.034433 0.1787183 0.2585367 0.205026 0.0158441 0.267975 0.0153604 0.030793 0.019641 0.0185135 0.0246114 0.017075 11 0.022308 0.030649 -0.00636162 26 0.095089 0.041483 0.0536062 0.970344 0.33375351 insignificant 1 1.00000 insignificant 0.540069 0.9979414 insignificant 1 1.00000 insignificant 0.00894485 0.2097900 insignificant 1 insignificant 0.022175 0.130852 -1.1732e-01 26 0.038533 0.099480 -0.0609474 5.3585e-01 1.0723e-06 weaklyHypometh 1.0000e+00 0.00026807 weaklyHypometh 4.8210e-01 1.5302e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0569115 1.1285e-01 insignificant 1.0000e+00 insignificant 0.022265 0.026015 0.00516091 24 0.069783 0.057379 0.0124034 6.6550e-04 9.1892e-01 weaklyHypermeth 6.0500e-02 1.0000e+00 weaklyHypermeth 4.6308e-04 0.99944751 weaklyHypermeth 7.7180e-02 1.000000 weaklyHypermeth 0.00901033 0.38239996 insignificant 1.000000 insignificant 0.030659 0.130852 -0.1143790 29 0.044076 0.099480 -5.5404e-02 6.2646e-01 1.4157e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant 8.9107e-01 0.16084110 insignificant 1.0000e+00 1.00000 insignificant -6.5856e-02 7.6286e-02 insignificant 1.0000e+00 insignificant 0.030552 0.026015 0.01389154 27 0.028451 0.057379 -0.0289282 1.4374e-02 9.9522e-01 weaklyHypermeth 5.7495e-01 1.00000000 insignificant 1.5485e-01 9.9977e-01 insignificant 1.0000e+00 1.000000 insignificant 0.00006548 9.9462e-01 insignificant 1.000000 insignificant 0.130705 0.025840 0.1446094 27 0.086560 0.043101 0.0434589 2.7790e-01 1.0000e+00 insignificant 1.000000 1.0000e+00 insignificant 0.4178220 1.0000e+00 insignificant 1.00000 1.0000e+00 insignificant 0.0659219 7.6973e-02 insignificant 1.000000 insignificant chr3 142738242 142739242 13961 RASA2 ENSG00000155903 0.576658 155 5 0.603867 111 5 0.604295 81 5 0.6291429 70 5 0.621453 57 5 0.669020 222 5 0.623872 88 5 0.546465 54 5 0.702484 90 5 0.6730217 75 5 0.675327 136 5 0.5666667 68 5 0.748333 74 5 NA 0 0 0.6593333 94 5 0.6911111 53 5 0.666667 50 5 0.7276812 77 5 0.6493366 146 5 0.686966 202 5 0.793333 39 3 0.6622877 64 5 0.676518 89 5 0.7888889 40 5 0.622222 39 5 0.6771903 184 5 0.717647 59 3 0.730000 25 4 0.679198 78 5 0.6145895 179 5 0.7060465 156 5 0.678798 280 5 0.4730769 115 5 0.6090476 63 5 0.636290 79 5 0.6393407 70 5 0.599192 53 5 0.6404762 129 5 0.684848 155 5 0.651676 145 5 0.7146786 105 5 0.677868 161 5 0.725925 130 5 0.5743260 0.603755 0.608205 0.6236429 0.6212179 0.665799 0.622509 0.5331818 0.7102484 0.6717243 0.6629994 0.5847222 0.7593750 NA 0.6661667 0.6875000 0.670000 0.7357609 0.6433753 0.6895643 0.767500 0.6571616 0.674985 0.775000 0.6194444 0.6799377 0.7011029 0.733750 0.684325 0.6177640 0.7047010 0.674310 0.4500962 0.6067857 0.641691 0.6560531 0.600758 0.6553571 0.688636 0.650187 0.7149612 0.6759937 0.714305 5 0.657909 0.675325 -0.02397598 5 0.652403 0.676563 -0.0241595 0.963675 0.02579273 weaklyHypometh 1 1.00000 insignificant 0.915140 0.0075493 weaklyHypometh 1 1.00000 insignificant -0.04704944 0.0300596 lowCoverage 1 lowCoverage 0.657909 0.597250 5.6745e-02 5 0.652403 0.594987 0.0574165 1.2953e-02 9.9914e-01 weaklyHypermeth 2.3987e-01 1.00000000 insignificant 1.3692e-01 9.6899e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0489400 1.3366e-01 lowCoverage 1.0000e+00 lowCoverage 0.657909 0.695402 -0.03514841 5 0.652403 0.687146 -0.0347426 9.7314e-01 1.3317e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9683e-01 0.01289924 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.04248890 0.03764777 lowCoverage 1.000000 lowCoverage 0.675325 0.597250 0.0803468 5 0.676563 0.594987 8.1576e-02 1.9444e-03 9.9985e-01 weaklyHypermeth 4.3210e-02 1.0000000 weaklyHypermeth 6.3482e-03 0.99747716 weaklyHypermeth 1.8307e-01 1.00000 insignificant 9.5989e-02 1.2587e-02 lowCoverage 4.1957e-01 lowCoverage 0.675325 0.695402 -0.01022023 5 0.676563 0.687146 -0.0105830 8.6957e-01 3.3028e-01 insignificant 1.0000e+00 1.00000000 insignificant 6.0574e-01 6.8386e-01 insignificant 1.0000e+00 1.000000 insignificant 0.00456053 8.3054e-01 lowCoverage 1.000000 lowCoverage 0.597250 0.695402 -0.0911011 5 0.594987 0.687146 -0.0921591 9.9910e-01 8.6637e-03 weaklyHypometh 1.000000 2.0148e-01 insignificant 0.9997154 3.4831e-03 weaklyHypometh 1.00000 1.2085e-01 insignificant -0.0914289 1.6315e-02 weaklyHypometh 0.651749 insignificant chr3 143050242 143051242 13981 GRK7 ENSG00000114124 0.668375 319 7 0.623508 165 7 0.657728 120 7 0.7979540 183 7 0.644643 59 7 0.804043 295 7 0.573079 117 7 0.567835 142 7 0.620994 98 7 0.7844668 93 7 0.689398 223 7 0.7291667 80 6 0.729819 163 7 0.8095238 19 3 0.7019569 112 7 0.7985348 66 5 0.636834 70 6 0.7078589 150 7 0.8170352 173 7 0.686094 328 7 0.750722 76 5 0.7321429 102 5 0.698877 151 7 0.6480089 99 5 0.715556 45 5 0.6888921 259 7 0.649499 112 5 0.832031 85 5 0.690661 103 7 0.7918514 228 7 0.7132104 269 7 0.776911 369 7 0.6361544 188 7 0.6829524 140 7 0.612422 302 7 0.5067100 55 5 0.713268 119 6 0.6845094 255 7 0.762001 201 7 0.663221 245 7 0.7574612 188 7 0.833988 200 7 0.677805 204 7 0.7824300 0.649768 0.725805 0.8123588 0.7655280 0.764161 0.685959 0.6527201 0.7106791 0.6902260 0.7546575 0.6844375 0.7723459 0.7678464 0.7786219 0.8022808 0.645121 0.7927744 0.7805579 0.7611321 0.741942 0.7335552 0.788510 0.756688 0.7150269 0.7435451 0.6748962 0.815305 0.809240 0.7596413 0.7173161 0.782792 0.5254478 0.5710693 0.650659 0.5153272 0.744070 0.7004155 0.791551 0.771317 0.7342966 0.7456703 0.809744 5 0.761008 0.768704 -0.01455472 7 0.687853 0.730341 -0.0424878 0.957502 0.06316219 insignificant 1 1.00000 insignificant 0.944101 0.1698438 insignificant 1 1.00000 insignificant -0.02158772 0.3762497 insignificant 1 insignificant 0.761008 0.661001 1.0356e-01 7 0.687853 0.652605 0.0352477 1.8611e-05 9.7098e-01 weaklyHypermeth 6.0035e-04 1.00000000 weaklyHypermeth 5.6083e-04 9.6345e-01 weaklyHypermeth 2.4384e-02 1.0000000 weaklyHypermeth 0.0631063 1.0786e-01 insignificant 1.0000e+00 insignificant 0.761008 0.800578 -0.02369858 7 0.687853 0.743838 -0.0559849 9.8359e-01 2.0941e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9283e-01 0.32745979 insignificant 1.0000e+00 1.000000 insignificant -0.03645276 0.34374530 insignificant 1.000000 insignificant 0.768704 0.661001 0.1164964 7 0.730341 0.652605 7.7735e-02 7.0288e-07 9.9964e-01 weaklyHypermeth 2.7034e-05 1.0000000 weaklyHypermeth 3.0538e-05 0.99598039 weaklyHypermeth 1.6966e-03 1.00000 weaklyHypermeth 8.4694e-02 3.9545e-02 weaklyHypermeth 1.0000e+00 insignificant 0.768704 0.800578 -0.01092233 7 0.730341 0.743838 -0.0134972 8.7411e-01 5.9397e-01 insignificant 1.0000e+00 1.00000000 insignificant 8.7890e-01 6.0607e-01 insignificant 1.0000e+00 1.000000 insignificant -0.01486504 6.8573e-01 insignificant 1.000000 insignificant 0.661001 0.800578 -0.1324983 7 0.652605 0.743838 -0.0912326 9.9991e-01 4.0397e-04 weaklyHypometh 1.000000 1.4962e-02 weaklyHypometh 0.9999901 2.7924e-04 weaklyHypometh 1.00000 2.1791e-02 weaklyHypometh -0.0995591 4.8442e-02 weaklyHypometh 1.000000 insignificant chr3 144274942 144275942 14013 ENSG00000163714 0.9022970 65 7 0.9594298 106 8 0.8701682 185 8 0.9234694 38 4 0.890995 102 6 0.831845 58 6 0.8651777 239 6 0.8648551 96 5 0.901322 96 6 0.869495 109 6 0.9047707 206 6 0.876522 105 6 0.8962552 114 6 NA 0 0 0.913397 171 6 0.9407407 100 6 0.867023 90 6 0.8928571 28 2 0.8581852 148 6 0.8298611 63 6 0.4583333 16 0 NA 0 0 0.800801 77 7 0.650000 21 3 0.6250000 7 0 0.9127504 157 8 0.6472222 23 2 0.8875000 17 1 0.9652778 63 6 0.8777487 119 7 0.8053488 145 7 0.9131944 78 7 0.867467 115 7 0.869565 213 6 0.929861 98 8 0.687500 12 0 0.900253 31 3 0.756430 125 7 0.904762 29 2 0.959821 80 6 0.861111 15 0 0.866369 40 4 0.975000 31 3 0.8848873 0.9494418 0.8658621 0.9207792 0.894297 0.9012987 0.8769451 0.8807115 0.90206817 0.8859059 0.9034755 0.8591861 0.8863295 NA 0.9104934 0.9288889 0.8671172 0.8803030 0.84467077 0.801515 0.4878788 NA 0.890373 0.6745455 0.7450545 0.8685300 0.6493939 0.8475280 0.9659091 0.8305721 0.9207037 0.9060606 0.8530622 0.8710333 0.97272727 0.7263439 0.8848485 0.73266077 0.8666667 0.9497835 0.99577922 0.8528571 0.960000 0 0.8900425 0.875519 1.1708e-02 6 0.884640 0.864540 0.02009943 0.284057 0.893544 insignificant 1 1 insignificant 0.171039 0.966948 insignificant 1 1 insignificant 0.11064584 0.0449889 lowCoverage 1 lowCoverage 0.8900425 0.8686869 0.0219201 6 0.884640 0.850475 0.0341644 1.4209e-01 8.9638e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.3407e-01 7.8364e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.05211891 0.23295265 insignificant 1.000000 insignificant 0.8900425 0.9076923 -0.02476468 4 0.884640 0.89951 -0.0148721 7.6604e-01 0.11822015 lowCoverage 1.0000e+00 1.000000 lowCoverage 9.9679e-01 6.2152e-03 lowCoverage 1.0000e+00 0.690580 lowCoverage -0.0261144 0.33887764 lowCoverage 1.00000 lowCoverage 0.875519 0.8686869 0.0085805 6 0.864540 0.850475 0.0140650 6.6170e-01 8.3433e-01 insignificant 1.00000000 1.0000e+00 insignificant 0.84704556 5.0788e-01 insignificant 1.000000 1.0000e+00 insignificant -0.0585269 0.3548418 lowCoverage 1.000000 lowCoverage 0.875519 0.9076923 -0.0401902 4 0.864540 0.89951 -0.0349715 9.5365e-01 2.1632e-01 lowCoverage 1.00000000 1.00000000 lowCoverage 9.9989e-01 3.9067e-03 lowCoverage 1.00000000 0.9766652 lowCoverage -0.1367603 0.0233001 lowCoverage 1 lowCoverage 0.8686869 0.9076923 -0.04588816 4 0.850475 0.89951 -0.0490365 9.4340e-01 2.2484e-02 lowCoverage 1.0000e+00 0.51100095 lowCoverage 9.9561e-01 0.00907195 lowCoverage 1.0000000 0.377998 lowCoverage -0.0782333 1.1778e-01 lowCoverage 1.000000 lowCoverage chr3 147332742 147333742 14053 ENSG00000198533 0.9242270 251 7 0.8441723 227 7 0.7367725 137 7 0.9635209 165 7 0.818452 107 5 0.704327 186 4 0.6989011 123 6 0.7908656 159 7 0.904407 103 4 0.746275 124 7 0.9412132 169 7 0.919443 87 2 0.9271511 211 7 0.932359 61 7 0.888810 138 7 0.8258929 70 4 0.847696 72 6 0.9175410 238 7 0.8952946 153 7 0.7925409 171 5 0.8311688 65 7 0.798701 78 4 0.839342 171 7 0.862290 68 7 0.9250749 69 4 0.8517565 185 8 0.6967993 54 5 0.7855807 69 7 0.8846755 229 7 0.9549856 212 7 0.9376874 163 7 0.8818066 221 7 0.797433 208 7 0.820124 118 7 0.941440 155 4 0.875196 34 2 0.772974 110 4 0.856395 176 7 0.929105 240 6 0.946192 183 6 0.967663 198 7 0.948189 195 7 0.830960 238 7 0.8755262 0.8095720 0.8128723 0.9239586 0.872239 0.8604765 0.8061375 0.8411467 0.88949732 0.8428305 0.9111196 0.8624622 0.9077721 0.9005319 0.9042714 0.8522796 0.8365558 0.8678215 0.87381281 0.876285 0.8055817 0.8364742 0.827820 0.9186161 0.8482773 0.8816061 0.8004097 0.8166853 0.8652041 0.9407844 0.9384606 0.8942184 0.8054663 0.7729030 0.87244098 0.8175590 0.8341510 0.82716634 0.9036300 0.8659453 0.93260706 0.9174766 0.905169 3 0.8790650 0.881944 -2.8667e-03 7 0.849912 0.885325 -0.03541259 0.844219 0.670812 insignificant 1 1 insignificant 0.735936 0.623648 insignificant 1 1 insignificant -0.00316257 0.9106713 insignificant 1 insignificant 0.8790650 0.8252185 0.0515620 7 0.849912 0.770746 0.0791656 4.0468e-03 9.1239e-01 weaklyHypermeth 1.2646e-01 1.0000e+00 insignificant 1.7689e-01 8.0973e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.00706603 0.82361418 insignificant 1.000000 insignificant 0.8795385 0.9240987 -0.03536467 7 0.877680 0.92937 -0.0516919 9.9889e-01 0.00789409 weaklyHypometh 1.0000e+00 0.560249 insignificant 9.9216e-01 2.9955e-03 weaklyHypometh 1.0000e+00 0.427928 insignificant -0.0734285 0.03808477 weaklyHypometh 1.00000 insignificant 0.881944 0.8252185 0.0470183 7 0.885325 0.770746 0.1145782 1.0317e-01 9.6182e-01 insignificant 1.00000000 1.0000e+00 insignificant 0.53824280 8.8251e-01 insignificant 1.000000 1.0000e+00 insignificant 0.0102286 0.7574098 insignificant 1.000000 insignificant 0.881795 0.9240987 -0.0356921 7 0.872583 0.92937 -0.0567891 9.9968e-01 1.3584e-02 weaklyHypometh 1.00000000 1.00000000 insignificant 9.9958e-01 5.4913e-03 weaklyHypometh 1.00000000 1.0000000 insignificant -0.0702659 0.0518142 insignificant 1 insignificant 0.8262500 0.9240987 -0.08972432 7 0.856385 0.92937 -0.0729871 9.9999e-01 8.9895e-05 weaklyHypometh 1.0000e+00 0.00599299 weaklyHypometh 1.0000e+00 0.01439269 weaklyHypometh 1.0000000 0.496300 insignificant -0.0804945 4.5185e-02 weaklyHypometh 1.000000 insignificant chr3 148623242 148624242 14066 ZIC1 ENSG00000152977 0.0079208 240 5 0.0194805 486 5 0.0979925 305 5 0.0069767 216 5 0.022184 285 5 0.145531 342 5 0.0255121 293 5 0.0099595 400 5 0.155499 441 5 0.173028 330 5 0.1771449 370 5 0.000000 250 5 0.0099228 234 5 0.015867 257 5 0.014060 360 5 0.0351691 241 5 0.000000 39 4 0.0076923 154 5 0.1727642 164 5 0.1797949 237 5 0.0373913 105 5 0.026915 132 5 0.023810 137 5 0.000000 240 5 0.0000000 91 5 0.0066449 432 5 0.1681818 286 5 0.0050505 165 5 0.1090620 183 5 0.0095157 583 5 0.0074167 391 5 0.0295172 301 5 0.452302 248 5 0.593434 81 5 0.629630 170 5 0.666667 14 1 0.415646 175 5 0.778755 282 5 0.199819 210 5 0.224932 175 5 0.168651 145 5 0.000000 134 5 0.011119 146 5 0.0117546 0.0289094 0.1019150 0.0103536 0.028398 0.0478987 0.0365037 0.0126786 0.01813684 0.0113284 0.0151775 0.0000000 0.0111666 0.0206514 0.0180570 0.0414356 0.0000000 0.0114155 0.01085867 0.015034 0.0433889 0.0236583 0.042401 0.0000000 0.0000000 0.0080816 0.0026982 0.0052581 0.0352961 0.0100452 0.0089943 0.0454469 0.5727045 0.5717275 0.58916794 0.6879756 0.4099901 0.80496187 0.0380931 0.0749009 0.00353338 0.0000000 0.013553 5 0.0276498 0.018385 9.6715e-03 5 0.107362 0.048417 0.05894543 0.053096 0.997809 insignificant 1 1 insignificant 0.087902 0.995801 insignificant 1 1 insignificant 0.02853288 0.2050345 lowCoverage 1 lowCoverage 0.0276400 0.6185567 -0.5913223 5 0.092025 0.522118 -0.4300933 1.0000e+00 2.2975e-46 hypomethylated 1.0000e+00 2.2975e-43 hypomethylated 1.0000e+00 2.2430e-11 hypomethylated 1.0000000 2.2430e-08 hypomethylated -0.52558074 0.00011146 lowCoverage 0.013933 lowCoverage 0.0276498 0.0333333 0.00220796 5 0.107362 0.14949 -0.0421291 4.0485e-01 0.03570021 inconclusive 1.0000e+00 1.000000 insignificant 2.8579e-01 4.8920e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0570792 0.31125328 lowCoverage 1.00000 lowCoverage 0.018385 0.6191950 -0.6015096 5 0.048417 0.609138 -0.5607209 1.0000e+00 2.3130e-31 hypomethylated 1.00000000 2.3130e-28 hypomethylated 1.00000000 2.7307e-11 hypomethylated 1.000000 2.7307e-08 hypomethylated -0.5541136 0.0000941 lowCoverage 0.010455 lowCoverage 0.018385 0.0333333 -0.0097352 5 0.048417 0.14949 -0.1010745 7.4135e-01 6.1640e-03 weaklyHypometh 1.00000000 0.78451478 insignificant 7.7182e-01 1.2348e-01 insignificant 1.00000000 1.0000000 insignificant -0.0856120 0.1514410 insignificant 1 insignificant 0.6191950 0.0333333 0.61906606 5 0.609138 0.14949 0.4596464 5.2406e-14 9.9989e-01 hypermethylated 2.6203e-11 1.00000000 hypermethylated 2.7925e-06 0.99995844 hypermethylated 0.0013963 1.000000 hypermethylated 0.4685016 1.2795e-04 lowCoverage 0.018278 lowCoverage chr3 150553142 150554142 14104 TM4SF18 ENSG00000163762 0.3855478 197 5 0.2230769 97 4 0.4007092 141 5 0.5458431 151 3 0.309255 54 4 0.434739 184 5 0.3939459 154 5 0.3079861 133 5 0.360000 120 5 0.415088 109 5 0.4413470 145 5 0.414103 114 5 0.3035347 121 5 NA 0 0 0.338182 117 5 0.3058333 88 5 0.395561 120 5 0.5212644 125 3 0.3072395 94 5 0.4884232 152 5 0.5277778 66 3 0.218019 73 3 0.377751 99 5 0.415001 82 5 0.1559733 63 3 0.3291694 163 5 0.4421456 96 4 0.3344444 70 5 0.3624565 67 5 0.2752916 145 5 0.2306442 151 5 0.4290041 224 5 0.318370 115 5 0.420147 82 5 0.396622 90 5 0.425000 43 3 0.476332 73 5 0.490476 111 5 0.496458 277 5 0.557348 199 5 0.207409 172 5 0.430294 157 5 0.437143 153 3 0.2697543 0.1289204 0.2701098 0.3031171 0.264499 0.3619811 0.3135878 0.2134150 0.26105150 0.2880054 0.3439711 0.2665042 0.1477303 NA 0.2048121 0.1744993 0.2546654 0.3397958 0.19682775 0.302508 0.5179423 0.2247268 0.298319 0.2589247 0.2158272 0.1996812 0.2532024 0.2906772 0.2432596 0.1890883 0.1698885 0.3617213 0.1666713 0.1624298 0.18292541 0.2006438 0.3291373 0.22460658 0.2863770 0.3709449 0.12812822 0.3057762 0.296842 3 0.3079470 0.294842 2.4085e-02 5 0.388736 0.351927 0.03680899 0.141893 0.938077 insignificant 1 1 insignificant 0.472801 0.861719 insignificant 1 1 insignificant 0.04229936 0.2576467 lowCoverage 1 lowCoverage 0.3079470 0.2840467 0.0345249 5 0.388736 0.400527 -0.0117911 9.7347e-04 4.2969e-03 weaklyHypermeth 4.0561e-02 7.1615e-01 weaklyHypermeth 2.0687e-02 1.3498e-02 weaklyHypermeth 0.9136658 1.0000e+00 insignificant -0.03738512 0.25989983 lowCoverage 1.000000 lowCoverage 0.3079470 0.2901879 -0.03685149 5 0.388736 0.46706 -0.0783271 8.7233e-01 0.00315060 weaklyHypometh 1.0000e+00 0.329395 insignificant 9.6423e-01 3.5058e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.0419575 0.53060674 lowCoverage 1.00000 lowCoverage 0.294842 0.2840467 0.0101284 5 0.351927 0.400527 -0.0486001 1.7372e-02 1.4074e-02 weaklyHypermeth 0.46950259 1.0000e+00 insignificant 0.01737096 2.2758e-02 weaklyHypermeth 0.668114 1.0000e+00 insignificant -0.0796845 0.0636024 lowCoverage 1.000000 lowCoverage 0.294842 0.2901879 -0.0594154 5 0.351927 0.46706 -0.1151361 9.6772e-01 7.0606e-03 weaklyHypometh 1.00000000 0.78451478 insignificant 9.5007e-01 6.1471e-02 insignificant 1.00000000 1.0000000 insignificant -0.0842568 0.2518687 lowCoverage 1 lowCoverage 0.2840467 0.2901879 -0.07392435 5 0.400527 0.46706 -0.0665361 9.2073e-01 9.9687e-04 weaklyHypometh 1.0000e+00 0.03843322 weaklyHypometh 5.6594e-01 0.01391878 weaklyHypometh 1.0000000 0.496300 insignificant -0.0045724 9.4590e-01 lowCoverage 1.000000 lowCoverage chr3 150774342 150775342 14117 TM4SF4 ENSG00000169903 0.6957151 405 5 0.5160000 176 5 0.2010534 110 3 0.5477972 181 4 0.565347 85 3 0.578471 276 5 0.4273810 101 5 0.4865355 131 5 0.334889 85 4 0.528615 85 3 0.6235394 423 5 0.336667 60 3 0.7886017 167 5 0.643810 65 3 0.446547 127 5 0.1204678 60 3 0.250000 18 0 0.6182718 228 5 0.6170968 168 5 0.5678142 315 5 0.4497457 102 4 0.613806 109 3 0.562072 238 5 0.501742 104 5 0.8715498 107 3 0.5537745 240 5 0.4458371 243 3 0.4420455 58 3 0.6337493 63 3 0.6609342 183 5 0.6259817 178 5 0.5183050 411 5 0.596414 148 5 0.535763 149 5 0.508669 131 5 0.509889 71 3 0.436583 185 5 0.465569 130 3 0.706279 229 5 0.737999 352 5 0.674715 182 5 0.653164 195 5 0.569731 316 5 0.8460610 0.6189559 0.3141712 0.7463852 0.547211 0.7236952 0.4034769 0.5368445 0.44900882 0.6818974 0.7390978 0.4247868 0.8736533 0.5867725 0.5728729 0.1848881 0.2333333 0.8586161 0.79456380 0.699336 0.6513114 0.6809055 0.726032 0.6325727 0.8070236 0.6651432 0.6153152 0.5173401 0.7049204 0.7735182 0.7739114 0.6467775 0.7811092 0.6151758 0.68745431 0.5135238 0.4632684 0.63444798 0.8339069 0.8700316 0.87308479 0.8750170 0.776100 3 0.6864666 0.694499 -2.8900e-03 5 0.560568 0.561719 -0.00115123 0.387658 0.560274 insignificant 1 1 insignificant 0.827546 0.056571 insignificant 1 1 insignificant -0.07856431 0.1416957 lowCoverage 1 lowCoverage 0.6864666 0.6154791 0.0736053 3 0.560568 0.501672 0.0588961 1.5585e-01 9.5773e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.2453e-01 6.2398e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage -0.01408364 0.75518540 lowCoverage 1.000000 lowCoverage 0.6864666 0.8437991 -0.15261599 5 0.560568 0.67564 -0.1150741 9.9697e-01 0.00299949 weaklyHypometh 1.0000e+00 0.329395 insignificant 9.9891e-01 5.4288e-05 weaklyHypometh 1.0000e+00 0.027144 weaklyHypometh -0.1736465 0.00182845 lowCoverage 0.23225 lowCoverage 0.694499 0.6154791 0.0771673 3 0.561719 0.501672 0.0600474 1.5372e-02 8.5260e-01 lowCoverage 0.42700781 1.0000e+00 lowCoverage 0.03858425 9.3649e-01 lowCoverage 1.000000 1.0000e+00 lowCoverage 0.0644807 0.1421825 lowCoverage 1.000000 lowCoverage 0.694499 0.8437991 -0.1478184 5 0.561719 0.67564 -0.1139229 9.9159e-01 6.0550e-07 weaklyHypometh 1.00000000 0.00030275 weaklyHypometh 9.7741e-01 3.1951e-06 weaklyHypometh 1.00000000 0.0031951 weaklyHypometh -0.0950822 0.0542541 lowCoverage 1 lowCoverage 0.6154791 0.8437991 -0.22507498 3 0.501672 0.67564 -0.1739702 9.9872e-01 7.1646e-05 lowCoverage 1.0000e+00 0.00541965 lowCoverage 9.9519e-01 0.00212196 lowCoverage 1.0000000 0.135281 lowCoverage -0.1595628 2.3104e-03 lowCoverage 0.169930 lowCoverage chr3 150861742 150862742 14127 WWTR1 ENSG00000018408 0.7419123 142 6 0.6418981 157 7 0.4430507 76 6 0.7584760 121 7 0.528360 57 3 0.711533 167 7 0.5944925 66 6 0.7152471 108 7 0.742857 58 7 0.552579 52 4 0.7735922 172 7 0.510440 37 3 0.6147872 85 7 0.674830 31 5 0.673232 61 7 0.4196429 23 1 0.666667 26 1 0.7132884 124 5 0.6522725 105 7 0.7340993 118 8 0.6406250 62 7 0.870000 38 3 0.761508 79 6 0.785675 57 7 0.7842491 72 4 0.7380203 137 8 0.5265152 58 7 0.6833333 30 2 0.6129032 97 4 0.7789888 170 7 0.7253342 135 7 0.7523024 158 7 0.612572 135 7 0.635524 60 5 0.631479 124 7 0.598214 25 2 0.617811 100 6 0.630978 133 6 0.679436 110 6 0.593099 102 6 0.613815 151 5 0.827839 62 5 0.772251 148 6 0.7787851 0.6825122 0.6046450 0.8482231 0.619978 0.7937136 0.7003019 0.7782271 0.85206349 0.7912698 0.8197441 0.7244083 0.8207790 0.7572161 0.8421134 0.7543956 0.7976059 0.8078509 0.74121354 0.810968 0.7886538 0.8549170 0.811697 0.8122971 0.7924074 0.7629019 0.5745513 0.8602564 0.7314839 0.8254158 0.8080031 0.8219985 0.7515241 0.6399374 0.74916498 0.7472518 0.6711200 0.73020901 0.7795990 0.7933707 0.74193020 0.8221400 0.854748 1 0.7210084 0.763038 -3.0131e-02 7 0.659865 0.722635 -0.06276987 0.899126 0.017269 weaklyHypometh 1 1 insignificant 0.949652 0.059552 insignificant 1 1 insignificant -0.07845837 0.0361822 weaklyHypometh 1 insignificant 0.7211646 0.6655113 0.0529047 7 0.697658 0.645688 0.0519701 4.9951e-03 5.9001e-01 weaklyHypermeth 1.4692e-01 1.0000e+00 insignificant 6.9199e-03 6.1461e-01 weaklyHypermeth 0.3642059 1.0000e+00 insignificant 0.02206620 0.37020687 insignificant 1.000000 insignificant 0.7210084 0.7521815 -0.00682639 5 0.659865 0.70746 -0.0475935 4.9926e-01 0.04559662 weaklyHypometh 1.0000e+00 1.000000 insignificant 4.3267e-01 6.0120e-02 insignificant 1.0000e+00 1.000000 insignificant -0.0541252 0.32613180 insignificant 1.00000 insignificant 0.763038 0.6649215 0.0788437 7 0.722635 0.632649 0.0899863 4.5466e-04 9.9804e-01 weaklyHypermeth 0.02273284 1.0000e+00 weaklyHypermeth 0.00099498 9.8324e-01 weaklyHypermeth 0.071070 1.0000e+00 weaklyHypermeth 0.1005246 0.0031482 weaklyHypermeth 0.286202 insignificant 0.763038 0.7521815 -0.0019547 5 0.722635 0.70746 0.0151764 3.2896e-01 5.1287e-01 insignificant 1.00000000 1.00000000 insignificant 2.9142e-01 5.3737e-01 insignificant 1.00000000 1.0000000 insignificant 0.0243332 0.6569360 insignificant 1 insignificant 0.6649215 0.7521815 -0.08728420 5 0.632649 0.70746 -0.0748099 8.5275e-01 7.5875e-05 weaklyHypometh 1.0000e+00 0.00541965 weaklyHypometh 8.3302e-01 0.00063625 weaklyHypometh 1.0000000 0.054449 weaklyHypometh -0.0761914 1.6735e-01 insignificant 1.000000 insignificant chr3 151719642 151720642 14166 TSC22D2 ENSG00000196428 0.8857459 310 12 0.8131606 706 12 0.8410170 198 8 0.8672040 386 8 0.787693 253 12 0.783943 374 10 0.8839458 358 12 0.8285066 195 12 0.881807 183 12 0.830180 192 10 0.8511282 509 12 0.817279 182 10 0.8377419 187 12 0.721418 122 8 0.853714 209 12 0.8268412 280 12 0.793985 1172 9 0.8093853 182 8 0.8602077 323 12 0.8293445 260 10 0.8360933 83 5 0.817460 37 2 0.856893 194 11 0.718366 189 12 0.8369989 282 8 0.8330057 448 12 0.8487776 151 8 0.8823192 135 9 0.8152923 236 11 0.8552144 483 12 0.8703716 518 12 0.8463292 324 12 0.819241 285 12 0.859867 217 12 0.828602 185 12 0.889646 144 7 0.768219 296 11 0.799748 433 12 0.881940 448 8 0.825175 319 8 0.893070 534 8 0.904570 179 8 0.854936 448 11 0.9082886 0.8824339 0.8323944 0.8521555 0.820501 0.8323942 0.8499640 0.8059136 0.88936615 0.8971456 0.8657405 0.8234061 0.8541554 0.8432265 0.8682823 0.8299596 0.8686368 0.8956928 0.88971813 0.843410 0.8567535 0.8765208 0.871077 0.8348866 0.8721592 0.8495190 0.8637062 0.9137579 0.8545157 0.8690157 0.8715138 0.8986401 0.8367695 0.8658871 0.83509994 0.8957528 0.8271141 0.83528072 0.9058547 0.9003432 0.88178781 0.9158592 0.887055 2 0.8639890 0.893506 3.9822e-03 12 0.825503 0.851635 -0.02613256 0.143691 0.829357 insignificant 1 1 insignificant 0.342559 0.891104 insignificant 1 1 insignificant -0.00454770 0.7635723 insignificant 1 insignificant 0.8639404 0.8858974 0.0051983 12 0.831058 0.822428 0.0086300 3.6455e-02 3.0894e-01 weaklyHypermeth 8.2853e-01 1.0000e+00 insignificant 4.9032e-01 4.1353e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.00265859 0.89606092 insignificant 1.000000 insignificant 0.8643913 0.9314997 -0.03412709 8 0.857265 0.86306 -0.0057949 5.6594e-01 0.00457688 weaklyHypometh 1.0000e+00 0.416080 insignificant 9.9455e-01 6.0066e-03 weaklyHypometh 1.0000e+00 0.690580 insignificant -0.0417258 0.04027902 weaklyHypometh 1.00000 insignificant 0.893472 0.8863928 -0.0021759 12 0.841038 0.845459 -0.0044210 2.3908e-01 1.9360e-01 insignificant 1.00000000 1.0000e+00 insignificant 0.55702270 2.3226e-01 insignificant 1.000000 1.0000e+00 insignificant 0.0072063 0.7420138 insignificant 1.000000 insignificant 0.893437 0.9314997 -0.0247872 8 0.828810 0.86306 -0.0342500 7.4577e-01 6.5854e-03 weaklyHypometh 1.00000000 0.78451478 insignificant 9.8907e-01 1.8104e-02 weaklyHypometh 1.00000000 1.0000000 insignificant -0.0371781 0.0748233 insignificant 1 insignificant 0.8862468 0.9314997 -0.02451600 8 0.833571 0.86306 -0.0294889 8.4621e-01 4.5165e-03 weaklyHypometh 1.0000e+00 0.12904148 insignificant 8.3715e-01 0.03175075 weaklyHypometh 1.0000000 0.858128 insignificant -0.0443844 8.2009e-02 insignificant 1.000000 insignificant chr3 153175742 153176742 14213 SUCNR1 ENSG00000198829 0.7896468 226 8 0.7350899 119 8 0.7256531 114 8 0.9110723 149 8 0.733036 63 6 0.724577 303 8 0.7008929 55 4 0.8013831 116 8 0.852795 88 7 0.766667 55 8 0.8549955 241 8 0.758467 56 5 0.8854722 106 8 0.814286 38 5 0.738707 71 5 0.8020833 37 2 0.586538 50 4 0.8662110 155 8 0.6632086 134 7 0.6591458 219 8 0.8407197 58 6 0.858681 58 7 0.791092 137 8 0.692593 84 7 0.8320208 87 8 0.7884596 153 8 0.7498975 94 7 0.9132102 59 4 0.7432449 96 8 0.7148298 185 8 0.8101637 114 8 0.8428756 268 8 0.714675 151 8 0.720696 104 8 0.653298 148 6 0.635417 41 6 0.819398 62 7 0.791705 128 8 0.786546 187 8 0.796245 177 8 0.836819 187 8 0.792733 152 8 0.878214 214 8 0.8268088 0.7596510 0.7695595 0.9012338 0.770091 0.7697966 0.7610134 0.8195278 0.83818756 0.8174056 0.8501493 0.7652152 0.8635564 0.8335369 0.7771640 0.8431856 0.6801819 0.8860676 0.71329267 0.858143 0.8724063 0.8827039 0.811563 0.8116585 0.8548416 0.8060805 0.7798527 0.8903605 0.7683563 0.8213172 0.8301361 0.8615626 0.7518081 0.7402335 0.69424203 0.6880131 0.8198673 0.80839454 0.8213982 0.8340148 0.86710321 0.8300248 0.893758 2 0.8087683 0.809045 4.7846e-03 8 0.793860 0.635029 0.15883035 0.161632 0.832538 insignificant 1 1 insignificant 0.634992 0.389022 insignificant 1 1 insignificant -0.02965259 0.2683805 insignificant 1 insignificant 0.8088050 0.7634069 0.0407823 8 0.792325 0.759087 0.0332379 1.5161e-02 9.0486e-01 weaklyHypermeth 3.8335e-01 1.0000e+00 insignificant 7.8749e-02 9.5597e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.04596516 0.22176570 insignificant 1.000000 insignificant 0.8088050 0.8484188 -0.04074235 8 0.792325 0.83030 -0.0379776 9.9187e-01 0.05139224 insignificant 1.0000e+00 1.000000 insignificant 9.1102e-01 2.8885e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0496150 0.07118423 insignificant 1.00000 insignificant 0.810208 0.7634069 0.0365691 8 0.793787 0.759087 0.0347000 3.3311e-02 8.7940e-01 weaklyHypermeth 0.79312081 1.0000e+00 insignificant 0.00930021 9.3929e-01 weaklyHypermeth 0.422737 1.0000e+00 insignificant 0.0756177 0.0595606 insignificant 1.000000 insignificant 0.810208 0.8484188 -0.0390587 8 0.793787 0.83030 -0.0365155 9.2736e-01 3.1580e-02 weaklyHypometh 1.00000000 1.00000000 insignificant 5.1151e-01 5.1523e-01 insignificant 1.00000000 1.0000000 insignificant -0.0199624 0.4480790 insignificant 1 insignificant 0.7634069 0.8484188 -0.07939044 8 0.759087 0.83030 -0.0712155 9.9123e-01 3.4409e-03 weaklyHypometh 1.0000e+00 0.10120273 insignificant 9.9552e-01 0.05013339 insignificant 1.0000000 1.000000 insignificant -0.0955802 2.4738e-02 weaklyHypometh 0.949844 insignificant chr3 154268742 154269742 14273 ENSG00000208721 0.6387397 53 5 0.6098639 98 7 0.3333333 20 0 0.5982143 55 5 0.712302 33 4 0.765707 82 7 0.9333333 13 0 0.7605042 112 6 0.714286 25 4 0.638690 41 6 0.7093280 152 7 0.625000 12 0 0.6555556 39 6 0.757143 54 6 0.771429 29 4 0.5333333 24 4 0.250000 6 0 0.7807823 49 6 0.6636905 46 6 0.5476190 44 3 0.4444444 15 0 0.666667 14 0 0.733333 34 6 0.707143 29 4 0.7142857 21 1 0.7500000 74 6 0.7916667 43 4 0.8095238 16 0 0.7238095 50 6 0.6929894 70 7 0.6488095 106 6 0.6269841 56 7 0.645918 35 5 0.682540 46 5 0.607143 97 7 1.000000 7 1 0.778968 44 4 0.752100 85 7 0.782653 41 4 0.776190 46 5 0.720879 64 7 0.571429 11 0 0.602041 51 7 0.5873016 0.5587302 0.3333333 0.5416667 0.712302 0.7266576 0.7419160 0.7205882 0.66666667 0.6386905 0.6608827 0.5000000 0.6555556 0.7571429 0.7333333 0.5333333 0.4021517 0.7609127 0.66369048 0.472222 0.4444444 0.6666667 0.688889 0.6583333 0.6666667 0.7083333 0.7569444 0.7777778 0.6777778 0.5632937 0.6319444 0.5648148 0.5869048 0.6296296 0.54166667 NA 0.7421296 0.72411616 0.7583333 0.7388889 0.70000000 0.5000000 0.559524 0 0.6990881 0.681214 1.1239e-02 6 0.769881 0.762271 0.00761026 0.517899 0.588780 insignificant 1 1 insignificant 0.843090 0.221046 insignificant 1 1 insignificant -0.04252868 0.3410478 lowCoverage 1 lowCoverage 0.6984772 0.7547771 -0.0057212 7 0.704133 0.709684 -0.0055511 7.8254e-01 6.6827e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.1517e-01 4.9649e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.09450212 0.19201409 lowCoverage 1.000000 lowCoverage 0.6984772 0.7605634 -0.00375149 5 0.704133 0.71157 -0.0074383 4.8435e-01 0.58985700 insignificant 1.0000e+00 1.000000 insignificant 6.2511e-01 3.3271e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0406957 0.48384539 lowCoverage 1.00000 lowCoverage 0.680000 0.7547771 -0.0183234 6 0.694348 0.709684 -0.0153358 5.5132e-01 4.0508e-01 insignificant 1.00000000 1.0000e+00 insignificant 0.37383465 4.3120e-01 insignificant 1.000000 1.0000e+00 insignificant -0.0519734 0.4395116 lowCoverage 1.000000 lowCoverage 0.680000 0.7605634 -0.0232618 4 0.694348 0.71157 -0.0172229 6.6606e-01 5.4252e-01 lowCoverage 1.00000000 1.00000000 lowCoverage 4.1380e-01 5.2313e-01 lowCoverage 1.00000000 1.0000000 lowCoverage 0.0018329 0.9727312 lowCoverage 1 lowCoverage 0.7547771 0.7605634 0.01072306 5 0.709684 0.71157 -0.0018871 5.2926e-01 6.8000e-01 insignificant 1.0000e+00 1.00000000 insignificant 6.4757e-01 0.69332397 insignificant 1.0000000 1.000000 insignificant 0.0538064 4.7652e-01 lowCoverage 1.000000 lowCoverage chr3 157375542 157376542 14326 KCNAB1 ENSG00000169282 0.8355184 134 5 0.6964436 118 6 0.6857143 32 6 0.8362179 145 6 0.812132 255 3 0.793386 71 6 0.6220785 111 6 0.8122807 98 6 0.657738 43 5 0.875992 41 6 0.8375680 168 6 0.766667 35 3 0.8226123 165 6 0.840507 253 4 0.797564 92 4 0.9000000 14 0 0.750000 6 0 0.8041136 192 6 0.8186795 114 6 0.7118111 90 6 0.3316327 34 4 0.888889 9 0 0.794096 254 4 0.957672 35 4 0.7807018 62 3 0.8127769 172 6 0.7506944 49 4 0.8571429 7 1 0.7647607 99 6 0.7736196 139 6 0.8099694 110 6 0.7772331 86 6 0.721317 123 6 0.677617 92 6 0.658102 97 6 0.777778 16 0 0.688099 97 6 0.620629 136 6 0.828869 101 6 0.840756 90 6 0.749022 122 6 0.930893 236 3 0.748206 137 5 0.8159415 0.7024542 0.7121429 0.8545433 0.833274 0.8280556 0.6823779 0.8296930 0.60468750 0.8921875 0.8663917 0.7262500 0.8214386 0.8425492 0.8056827 0.8603875 0.6096010 0.8069551 0.83561594 0.740421 0.4950893 0.8512324 0.800701 0.9555556 0.8421053 0.8144039 0.7135938 NA 0.7376578 0.8021825 0.8600768 0.8095588 0.7512059 0.6780797 0.62010417 0.7437500 0.6495655 0.66739510 0.8462054 0.8789980 0.77516496 0.8911564 0.828424 0 0.8043179 0.798104 7.7805e-03 6 0.790489 0.783079 0.00740978 0.540187 0.792496 insignificant 1 1 insignificant 0.700778 0.424781 insignificant 1 1 insignificant 0.00891886 0.8517054 lowCoverage 1 lowCoverage 0.8043179 0.6844920 0.1187603 6 0.790489 0.680353 0.1101352 3.0852e-09 9.9932e-01 weaklyHypermeth 3.0852e-07 1.0000e+00 weaklyHypermeth 5.0844e-04 9.9887e-01 weaklyHypermeth 0.0391109 1.0000e+00 weaklyHypermeth 0.09326085 0.00601019 lowCoverage 0.462323 lowCoverage 0.8043179 0.8396501 -0.03047933 5 0.790489 0.80752 -0.0170351 9.0840e-01 0.06911558 insignificant 1.0000e+00 1.000000 insignificant 9.4526e-01 1.9146e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.0356979 0.38041085 lowCoverage 1.00000 lowCoverage 0.798104 0.6844920 0.1121909 6 0.783079 0.680353 0.1027254 6.9423e-06 9.9627e-01 weaklyHypermeth 0.00063112 1.0000e+00 weaklyHypermeth 0.00213452 9.7213e-01 weaklyHypermeth 0.133408 1.0000e+00 insignificant 0.0843420 0.1060655 lowCoverage 1.000000 lowCoverage 0.798104 0.8396501 -0.0357462 5 0.783079 0.80752 -0.0244449 9.2783e-01 9.4029e-02 insignificant 1.00000000 1.00000000 insignificant 9.4173e-01 1.3705e-01 insignificant 1.00000000 1.0000000 insignificant -0.0446168 0.4339706 lowCoverage 1 lowCoverage 0.6844920 0.8396501 -0.14656393 5 0.680353 0.80752 -0.1271704 9.9845e-01 1.0768e-06 weaklyHypometh 1.0000e+00 0.00015383 weaklyHypometh 9.9945e-01 0.00010195 weaklyHypometh 1.0000000 0.020391 weaklyHypometh -0.1289588 1.5089e-02 weaklyHypometh 0.635465 insignificant chr3 158288942 158289942 14369 ENSG00000222499 0.0211776 705 10 0.0023256 456 10 0.0076014 282 10 0.1160085 697 10 0.000000 267 8 0.098703 772 10 0.0034483 514 10 0.0057692 317 10 0.012083 324 10 0.012593 248 10 0.0017857 549 10 0.011667 237 10 0.0038462 220 10 0.075641 128 6 0.046405 383 10 0.0000000 246 10 0.020000 85 5 0.0369843 799 8 0.0013699 350 10 0.0057844 584 10 0.0540000 92 6 0.042857 141 8 0.077790 402 10 0.011506 145 8 0.0025641 320 10 0.0058732 630 10 0.0075758 220 9 0.0000000 156 8 0.0050633 419 10 0.0109826 643 10 0.0096040 570 10 0.0032146 669 10 0.004329 337 10 0.000000 343 8 0.061835 488 10 0.000000 67 5 0.078125 344 6 0.000000 574 10 0.043766 975 11 0.126690 636 10 0.000819 676 10 0.000000 803 10 0.081344 723 10 0.0093523 0.0028789 0.0107526 0.0135397 0.000000 0.0062881 0.0058210 0.0085023 0.01058395 0.0071025 0.0018948 0.0027331 0.0012985 0.0161123 0.0149423 0.0000000 0.0064737 0.0023616 0.00297318 0.010315 0.0175241 0.0291686 0.049165 0.0119205 0.0031742 0.0053717 0.0029231 0.0000000 0.0053726 0.0037996 0.0089646 0.0044688 0.0058950 0.0000000 0.00293300 0.0000000 0.0033913 0.00000000 0.0056233 0.0032068 0.00111526 0.0000000 0.016047 6 0.0072277 0.010892 -3.2304e-03 10 0.045146 0.024206 0.02093995 0.775518 0.356283 insignificant 1 1 insignificant 0.790419 0.740037 insignificant 1 1 insignificant 0.00490712 0.6437992 insignificant 1 insignificant 0.0071096 0.0032513 0.0039910 10 0.033234 0.108590 -0.0753553 1.5788e-01 9.9957e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.1527e-01 9.9994e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.00011153 0.99479395 insignificant 1.000000 insignificant 0.0071105 0.0062943 0.00047047 10 0.036004 0.12482 -0.0888144 7.0883e-01 0.93609222 insignificant 1.0000e+00 1.000000 insignificant 8.6567e-01 4.8919e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0263643 0.34997819 insignificant 1.00000 insignificant 0.010904 0.0032513 0.0078995 10 0.026068 0.108590 -0.0825214 2.4648e-01 9.9990e-01 insignificant 1.00000000 1.0000e+00 insignificant 0.18866810 9.9993e-01 insignificant 1.000000 1.0000e+00 insignificant -0.0047956 0.7773789 insignificant 1.000000 insignificant 0.010907 0.0062943 0.0036166 10 0.028241 0.12482 -0.0965777 4.1050e-01 5.6986e-01 insignificant 1.00000000 1.00000000 insignificant 7.2573e-01 4.9221e-01 insignificant 1.00000000 1.0000000 insignificant -0.0312714 0.2753035 insignificant 1 insignificant 0.0027881 0.0062943 -0.00369522 10 0.034305 0.12482 -0.0905128 9.9998e-01 2.8523e-01 insignificant 1.0000e+00 1.00000000 insignificant 1.0000e+00 0.26679978 insignificant 1.0000000 1.000000 insignificant -0.0264758 3.8349e-01 insignificant 1.000000 insignificant chr3 158326042 158327042 14376 ENSG00000222499 0.8216812 222 5 0.8469371 114 5 0.5683761 108 5 0.8104545 147 5 0.658571 41 5 0.821217 232 5 0.8154622 62 4 0.8304813 93 5 0.769831 87 5 0.898889 69 5 0.8370600 133 5 0.773039 43 4 0.8686622 100 5 0.845238 13 2 0.808998 82 5 0.7595960 34 3 0.836580 33 4 0.7541114 158 5 0.8395378 107 5 0.7990334 189 5 0.7957750 82 5 0.796329 61 5 0.815625 159 5 0.845635 65 5 0.8846154 48 4 0.8472707 151 5 0.7670396 56 4 0.7928571 60 5 0.8201429 94 5 0.8163391 136 5 0.8325986 138 5 0.8078942 241 5 0.743358 119 5 0.765051 62 5 0.533293 82 3 0.913333 36 4 0.824766 86 5 0.772877 134 5 0.865618 226 5 0.764897 215 5 0.805090 172 5 0.758984 190 5 0.809633 205 5 0.8776122 0.8998683 0.5985003 0.8567208 0.723543 0.8807193 0.7845735 0.8458608 0.80347205 0.9189323 0.8827625 0.7337332 0.9059283 0.8456766 0.8565990 0.8143305 0.8062831 0.7924366 0.88638692 0.867927 0.8717822 0.8323729 0.876274 0.8651300 0.9454233 0.8975734 0.7788022 0.8752328 0.8684517 0.8687584 0.8706681 0.8673305 0.8430566 0.8203487 0.67848385 0.8849162 0.8739471 0.84334442 0.9042757 0.7941318 0.84695127 0.7981179 0.859274 4 0.8185776 0.838110 -2.2744e-02 5 0.796698 0.817913 -0.02121484 0.660755 0.055393 insignificant 1 1 insignificant 0.560964 0.015623 weaklyHypometh 1 1 insignificant -0.02032229 0.2897473 lowCoverage 1 lowCoverage 0.8185776 0.7784200 0.0402789 5 0.796698 0.752942 0.0437566 5.6396e-02 9.4241e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.5652e-01 8.3915e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.03940820 0.49344951 lowCoverage 1.000000 lowCoverage 0.8185776 0.8293651 -0.00512021 5 0.796698 0.80240 -0.0056982 6.7135e-01 0.44500063 insignificant 1.0000e+00 1.000000 insignificant 5.2218e-01 6.8899e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0026564 0.91834656 lowCoverage 1.00000 lowCoverage 0.838110 0.7784200 0.0550024 5 0.817913 0.752942 0.0649714 3.8231e-03 9.9905e-01 weaklyHypermeth 0.12743521 1.0000e+00 insignificant 0.04817798 9.7828e-01 weaklyHypermeth 1.000000 1.0000e+00 insignificant 0.0597305 0.3020924 lowCoverage 1.000000 lowCoverage 0.838110 0.8293651 0.0157457 5 0.817913 0.80240 0.0155167 4.5062e-03 2.0911e-01 weaklyHypermeth 0.33811184 1.00000000 insignificant 7.8325e-03 4.1153e-01 weaklyHypermeth 0.65270639 1.0000000 insignificant 0.0176659 0.4362060 lowCoverage 1 lowCoverage 0.7784200 0.8293651 -0.04753190 5 0.752942 0.80240 -0.0494547 6.6312e-01 5.3645e-02 insignificant 1.0000e+00 1.00000000 insignificant 6.5094e-01 0.40054365 insignificant 1.0000000 1.000000 insignificant -0.0420646 4.7150e-01 lowCoverage 1.000000 lowCoverage chr3 165407242 165408242 14494 MIR1263 ENSG00000221251 0.8983761 342 7 0.7906425 178 6 0.7255482 89 6 0.8171053 272 6 0.822712 89 6 0.857576 207 7 0.7941835 75 4 0.9021893 169 7 0.805125 84 6 0.829185 120 7 0.8682489 225 7 0.761111 43 2 0.8938414 185 7 0.780612 59 5 0.908446 122 6 0.8492063 43 3 0.538889 39 3 0.7544856 289 7 0.8735952 125 7 0.7577381 180 7 0.6775510 51 5 0.835404 121 7 0.813343 149 6 0.674892 90 6 0.8480842 83 7 0.9128392 221 6 0.8815932 123 7 0.7374398 89 7 0.7485870 204 6 0.9242660 196 6 0.9073902 200 7 0.9422242 247 7 0.748447 153 6 0.694557 132 6 0.850794 227 6 0.692177 45 3 0.663339 104 7 0.880406 192 7 0.879429 262 7 0.911948 235 6 0.884944 308 7 0.927098 185 7 0.945101 295 6 0.7531773 0.6839374 0.7190544 0.7324227 0.791711 0.7378823 0.7127371 0.7628417 0.69249143 0.7080976 0.7802441 0.6834491 0.7942058 0.8183036 0.8029336 0.7579193 0.6487923 0.7130484 0.77135207 0.716163 0.7210317 0.8322927 0.755826 0.5872727 0.7482915 0.8111059 0.7749799 0.6714097 0.6830089 0.8222218 0.7890377 0.8428534 0.6489294 0.5974592 0.70773810 0.6858631 0.6086306 0.75691860 0.7496192 0.8211694 0.77364895 0.7965278 0.868896 4 0.8112436 0.830891 -1.6040e-02 7 0.837569 0.844719 -0.00714956 0.888176 0.209317 insignificant 1 1 insignificant 0.810448 0.270992 insignificant 1 1 insignificant -0.01386028 0.6818955 insignificant 1 insignificant 0.8112436 0.7573271 0.0648357 6 0.837569 0.771433 0.0661367 8.5669e-06 9.9136e-01 weaklyHypermeth 5.7113e-04 1.0000e+00 weaklyHypermeth 3.5277e-03 9.8869e-01 weaklyHypermeth 0.1959827 1.0000e+00 insignificant 0.05648758 0.21125995 insignificant 1.000000 insignificant 0.8112436 0.8809339 -0.05156191 6 0.837569 0.90613 -0.0685583 9.9997e-01 0.00104967 weaklyHypometh 1.0000e+00 0.156375 insignificant 9.9991e-01 2.2950e-04 weaklyHypometh 1.0000e+00 0.057375 weaklyHypometh -0.0982631 0.00029172 weaklyHypometh 0.08041 weaklyHypometh 0.830891 0.7573271 0.0736841 6 0.844719 0.771433 0.0732863 1.3232e-03 9.9483e-01 weaklyHypermeth 0.05292629 1.0000e+00 weaklyHypermeth 0.01361689 9.9659e-01 weaklyHypermeth 0.544676 1.0000e+00 insignificant 0.0703479 0.1559510 insignificant 1.000000 insignificant 0.830891 0.8809339 -0.0348691 6 0.844719 0.90613 -0.0614088 9.8851e-01 6.9694e-02 insignificant 1.00000000 1.00000000 insignificant 9.9246e-01 2.1320e-02 weaklyHypometh 1.00000000 1.0000000 insignificant -0.0844028 0.0140444 weaklyHypometh 1 insignificant 0.7573271 0.8809339 -0.11270270 6 0.771433 0.90613 -0.1346951 9.9992e-01 5.5459e-05 weaklyHypometh 1.0000e+00 0.00499836 weaklyHypometh 9.9995e-01 0.00163817 weaklyHypometh 1.0000000 0.117012 insignificant -0.1547506 7.1284e-03 weaklyHypometh 0.419320 insignificant chr3 171353842 171354842 14589 ENSG00000199536 0.7517587 141 7 0.6767589 118 7 0.6164835 68 6 0.8351277 161 7 0.487046 75 7 0.744789 104 7 0.6876457 86 7 0.7486645 75 7 0.437500 55 7 0.739229 57 7 0.7094410 164 7 0.694444 36 3 0.7604167 78 7 0.854167 71 7 0.897632 96 7 0.6696429 30 3 0.857143 7 0 0.7507796 179 5 0.7708333 34 3 0.7976190 36 3 0.5714286 18 0 0.928571 12 0 0.722689 75 7 0.756250 45 3 0.7841782 123 7 0.6894180 78 7 0.6111111 15 0 0.7500000 16 0 0.7206714 119 7 0.7321429 65 7 0.6517857 75 7 0.7639456 64 7 0.801030 122 7 0.698701 76 7 0.706122 101 7 0.666667 6 0 0.670086 82 7 0.597886 94 7 0.622917 55 3 0.724220 120 7 0.832614 126 7 0.791667 85 3 0.835374 63 6 0.7459336 0.6755971 0.7155139 0.8257460 0.580568 0.7833672 0.7016317 0.7170689 0.50000000 0.7432306 0.7101279 0.7177015 0.7352941 0.8627451 0.8949355 0.7983193 0.8235294 0.7875127 0.88235294 0.789216 0.5882353 0.9117647 0.716263 0.8764706 0.7824162 0.7397759 0.6712673 0.8529412 0.7333784 0.7312092 0.6680672 0.7887955 0.7420952 0.6770053 0.70756303 0.7119015 0.6571650 0.68036332 0.6147059 0.7328600 0.77693222 0.7843137 0.831933 0 0.7388956 0.748580 -9.4414e-03 7 0.678387 0.607572 0.07081495 0.855487 0.412751 insignificant 1 1 insignificant 0.761083 0.548139 insignificant 1 1 insignificant 0.00084006 0.9818552 lowCoverage 1 lowCoverage 0.7388956 0.6860707 0.0611154 7 0.678387 0.649301 0.0290855 8.8996e-04 9.2933e-01 weaklyHypermeth 3.8694e-02 1.0000e+00 weaklyHypermeth 7.1244e-02 9.3471e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.03427407 0.37184423 insignificant 1.000000 insignificant 0.7403614 0.7884187 -0.03923791 7 0.694548 0.81905 -0.1245032 9.6196e-01 0.05614675 insignificant 1.0000e+00 1.000000 insignificant 8.6769e-01 1.7788e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0370022 0.45876177 insignificant 1.00000 insignificant 0.748580 0.6860707 0.0717101 7 0.607572 0.649301 -0.0417295 1.0456e-03 9.2962e-01 weaklyHypermeth 0.04356848 1.0000e+00 weaklyHypermeth 0.10301537 9.3104e-01 insignificant 1.000000 1.0000e+00 insignificant 0.0334340 0.3918473 lowCoverage 1.000000 lowCoverage 0.751429 0.7879464 -0.0249019 7 0.652268 0.79643 -0.1441647 8.3068e-01 2.8381e-01 insignificant 1.00000000 1.00000000 insignificant 8.3487e-01 3.6555e-01 insignificant 1.00000000 1.0000000 insignificant -0.0378423 0.4530355 lowCoverage 1 lowCoverage 0.6875000 0.7879464 -0.11333802 7 0.730464 0.79643 -0.0659691 9.6855e-01 1.7624e-03 weaklyHypometh 1.0000e+00 0.05874598 weaklyHypometh 9.2218e-01 0.01703098 weaklyHypometh 1.0000000 0.549387 insignificant -0.0712763 1.8222e-01 insignificant 1.000000 insignificant chr3 171625842 171626842 14601 CLDN11 ENSG00000013297 0.6766177 265 5 0.7382885 228 5 0.5544742 184 5 0.5933212 263 4 0.591621 72 5 0.532764 286 5 0.7739900 134 5 0.7409511 199 5 0.629200 160 5 0.519411 147 5 0.7860993 196 5 0.835479 103 4 0.4468642 227 5 0.700000 10 1 0.474109 137 5 0.8068217 74 4 0.394258 122 4 0.5692188 280 5 0.6037757 175 5 0.4997589 247 5 0.8826993 72 5 0.314423 119 3 0.743981 179 5 0.435788 113 5 0.6727620 131 4 0.3884580 345 5 0.6301515 78 5 0.4451770 52 5 0.4192680 191 5 0.4183313 344 5 0.5427820 323 5 0.8282747 318 5 0.735253 261 5 0.660895 152 5 0.660326 235 4 0.793846 49 4 0.819737 118 5 0.798363 349 5 0.183831 388 5 0.418630 358 5 0.388684 345 4 0.261649 248 5 0.251014 315 5 0.5423436 0.6867489 0.6317529 0.4787731 0.576974 0.5225870 0.7640405 0.6849490 0.60005361 0.5570954 0.7793840 0.7842886 0.4097811 NA 0.3812361 0.8016174 0.3659492 0.5101576 0.61868015 0.478983 0.8018702 0.1839606 0.678650 0.4870849 0.6111633 0.3690243 0.6679590 0.5661724 0.4980524 0.4102314 0.4285934 0.7433130 0.8050167 0.6740818 0.74248144 0.8067308 0.8574930 0.88781195 0.1173724 0.3005382 0.14408809 0.2366000 0.141125 3 0.5765175 0.507285 7.3385e-02 5 0.593434 0.547886 0.04554754 0.051803 0.986059 insignificant 1 1 insignificant 0.216127 0.981979 insignificant 1 1 insignificant 0.06317651 0.3164958 lowCoverage 1 lowCoverage 0.5766486 0.7070447 -0.1970490 5 0.612120 0.750576 -0.1384557 2.6994e-05 6.8374e-11 weaklyHypometh 1.6871e-03 2.2791e-08 weaklyHypometh 1.0517e-01 2.0840e-07 weaklyHypometh 1.0000000 1.0420e-04 weaklyHypometh -0.12138558 0.00907371 lowCoverage 0.604914 lowCoverage 0.5765175 0.2170496 0.37509884 5 0.593434 0.33566 0.2577742 1.7144e-16 0.99900755 hypermethylated 1.7144e-13 1.000000 hypermethylated 2.4538e-11 9.9907e-01 hypermethylated 2.4538e-08 1.000000 hypermethylated 0.3225893 0.00032164 lowCoverage 0.08041 lowCoverage 0.506880 0.7070447 -0.2699180 5 0.540797 0.750576 -0.2097794 2.4405e-02 1.3526e-08 hypomethylated 0.61013127 6.7630e-06 hypomethylated 0.30226593 9.6636e-07 hypomethylated 1.000000 4.8318e-04 hypomethylated -0.1845621 0.0086047 lowCoverage 0.573647 lowCoverage 0.507285 0.2170496 0.3090877 5 0.547886 0.33566 0.2122267 6.4726e-07 9.9868e-01 hypermethylated 0.00016182 1.00000000 hypermethylated 9.9004e-07 9.9718e-01 hypermethylated 0.00099004 1.0000000 hypermethylated 0.2594128 0.0024077 lowCoverage 1 lowCoverage 0.7070447 0.2162326 0.45688551 5 0.750576 0.26946 0.4811181 3.2053e-16 3.5326e-01 hypermethylated 3.2053e-13 1.00000000 hypermethylated 1.5210e-06 0.78145663 hypermethylated 0.0013963 1.000000 hypermethylated 0.4439748 6.1887e-05 lowCoverage 0.014540 lowCoverage chr3 172024942 172025942 14634 ENSG00000213174 0.8037639 182 5 0.7553956 80 5 0.7428571 81 5 0.8124183 87 5 0.663571 38 5 0.796437 142 5 0.7649070 65 4 0.7627007 68 4 0.762121 44 4 0.834325 66 5 0.8136803 158 5 0.793207 74 5 0.7734848 55 4 NA 0 0 0.844672 77 5 0.6958974 38 3 0.617778 43 5 0.8079431 127 5 0.7210642 73 5 0.8518283 161 5 0.9136364 35 4 0.929524 40 3 0.801242 111 5 0.944444 25 2 0.8428571 27 3 0.7538213 87 5 0.8070055 39 3 0.9035714 21 2 0.7659632 66 5 0.7905938 102 5 0.8100901 107 5 0.8010101 223 5 0.654741 73 5 0.775882 55 4 0.683015 93 5 0.898788 60 5 0.485714 17 2 0.769652 111 5 0.786620 190 5 0.841798 166 5 0.834901 175 5 0.856117 163 5 0.733769 172 5 0.8286557 0.7516175 0.7791287 0.8426274 0.785334 0.8120734 0.8272057 0.7767183 0.74344509 0.8647487 0.8358488 0.8480075 0.7691491 NA 0.8890934 0.8252410 0.7049251 0.8530868 0.72216138 0.852586 0.8628304 0.8932793 0.836835 0.9085894 0.7879939 0.8117846 0.7938354 0.8762140 0.8202753 0.7932057 0.8176839 0.7946913 0.6661571 0.7532332 0.68520702 0.8497743 0.5146910 0.79054958 0.8311049 0.8524431 0.85580475 0.8959681 0.791188 2 0.7980711 0.807475 -6.3876e-03 5 0.784607 0.800306 -0.01569978 0.730094 0.286279 insignificant 1 1 insignificant 0.853349 0.010874 weaklyHypometh 1 1 insignificant -0.06927540 0.0080846 lowCoverage 1 lowCoverage 0.7980711 0.7457213 0.0578915 5 0.784607 0.746653 0.0379537 9.7873e-03 8.2483e-01 weaklyHypermeth 2.6452e-01 1.0000e+00 insignificant 4.2017e-02 6.1445e-01 weaklyHypermeth 1.0000000 1.0000e+00 insignificant 0.05807247 0.36352299 lowCoverage 1.000000 lowCoverage 0.7980711 0.8083141 -0.02517809 5 0.784607 0.80914 -0.0245330 9.5251e-01 0.10773071 insignificant 1.0000e+00 1.000000 insignificant 9.7094e-01 5.5986e-02 insignificant 1.0000e+00 1.000000 insignificant -0.0412698 0.16078455 lowCoverage 1.00000 lowCoverage 0.807475 0.7457213 0.0621262 5 0.800306 0.746653 0.0536535 1.0024e-02 9.8586e-01 weaklyHypermeth 0.28640029 1.0000e+00 insignificant 0.00441768 9.8097e-01 weaklyHypermeth 0.245427 1.0000e+00 insignificant 0.1273479 0.0775307 lowCoverage 1.000000 lowCoverage 0.807475 0.8083141 -0.0192250 5 0.800306 0.80914 -0.0088332 8.3247e-01 1.5199e-01 insignificant 1.00000000 1.00000000 insignificant 1.3777e-01 4.3396e-01 insignificant 1.00000000 1.0000000 insignificant 0.0280056 0.3659723 lowCoverage 1 lowCoverage 0.7457213 0.8083141 -0.08330299 5 0.746653 0.80914 -0.0624867 9.5291e-01 9.4307e-03 weaklyHypometh 1.0000e+00 0.24181289 insignificant 8.4523e-01 0.01346527 weaklyHypometh 1.0000000 0.496300 insignificant -0.0993423 1.5265e-01 lowCoverage 1.000000 lowCoverage chr3 172153842 172154842 14636 EIF5A2 ENSG00000163577 0.6439572 221 5 0.4696851 121 5 0.5130719 106 5 0.6503910 196 5 0.549405 61 5 0.673685 195 5 0.6135864 84 5 0.5254386 76 5 0.564560 73 5 0.588599 70 5 0.5534042 128 5 0.475000 58 5 0.6313561 87 5 NA 0 0 0.618333 78 5 0.6492308 60 5 0.304242 32 3 0.5421401 188 5 0.5666667 32 4 0.5875046 205 5 0.5687179 45 5 0.491295 85 5 0.423038 118 5 0.606081 94 5 0.5863636 57 5 0.6706488 117 5 0.4727941 77 5 0.6695238 40 5 0.6738817 42 5 0.5652286 129 5 0.5485714 97 5 0.5857298 261 5 0.319655 129 5 0.400844 47 5 0.407143 94 5 0.176190 34 5 0.408730 55 5 0.557759 109 5 0.497969 199 5 0.563333 158 5 0.548434 208 5 0.496938 195 5 0.654078 206 5 0.6533485 0.4832760 0.5241174 0.6567640 0.566308 0.6827544 0.6268382 0.5421241 0.57600733 0.5978081 0.5697658 0.4909946 0.6425403 NA 0.6349238 0.6615385 0.3163897 0.5536227 0.58109319 0.601214 0.5892611 0.4971254 0.438587 0.6185843 0.5997067 0.6806166 0.4861045 0.6814644 0.6854334 0.5764555 0.5618493 0.5983448 0.3304273 0.4217986 0.41013825 0.1894521 0.4196962 0.57506078 0.5053538 0.5741039 0.55419706 0.5056517 0.656704 5 0.5982617 0.585198 1.2347e-02 5 0.577197 0.564436 0.01276078 0.359127 0.870390 insignificant 1 1 insignificant 0.826447 0.586318 insignificant 1 1 insignificant -0.00759864 0.8045518 lowCoverage 1 lowCoverage 0.5982617 0.4038462 0.2000625 5 0.577197 0.379333 0.1978637 2.2253e-07 1.0000e+00 hypermethylated 2.0230e-05 1.0000e+00 hypermethylated 1.1839e-03 9.9988e-01 weaklyHypermeth 0.0789245 1.0000e+00 weaklyHypermeth 0.18583726 0.01290913 lowCoverage 0.780816 lowCoverage 0.5982617 0.6231884 0.04059571 5 0.577197 0.55227 0.0249302 1.4629e-03 0.39187631 weaklyHypermeth 1.3299e-01 1.000000 insignificant 1.4209e-02 2.9496e-01 weaklyHypermeth 1.0000e+00 1.000000 insignificant 0.0120738 0.73778926 lowCoverage 1.00000 lowCoverage 0.585198 0.4038462 0.1875739 5 0.564436 0.379333 0.1851030 8.7624e-05 9.9998e-01 weaklyHypermeth 0.00584160 1.0000e+00 weaklyHypermeth 0.00182869 9.9993e-01 weaklyHypermeth 0.121913 1.0000e+00 insignificant 0.1934359 0.0105650 weaklyHypermeth 0.656593 insignificant 0.585198 0.6231884 0.0259304 5 0.564436 0.55227 0.0121694 3.7061e-02 3.3362e-01 weaklyHypermeth 1.00000000 1.00000000 insignificant 4.8666e-02 5.2292e-01 weaklyHypermeth 1.00000000 1.0000000 insignificant 0.0196725 0.6058929 insignificant 1 insignificant 0.4038462 0.6231884 -0.16450717 5 0.379333 0.55227 -0.1729335 9.9563e-01 6.2367e-03 weaklyHypometh 1.0000e+00 0.17324251 insignificant 9.9259e-01 0.02435043 weaklyHypometh 1.0000000 0.695727 insignificant -0.1737634 1.9026e-02 weaklyHypometh 0.761057 insignificant chr3 172228742 172229742 14638 SLC2A2 ENSG00000163581 0.4583920 222 6 0.1832612 41 2 0.1102564 28 2 0.3288320 225 6 0.250000 15 1 0.384318 172 6 0.0000000 46 2 0.2431319 41 2 0.073160 68 2 0.037879 70 2 0.1166667 51 2 0.034483 47 2 0.0935770 72 2 0.104167 34 2 0.330435 33 2 0.0479167 33 2 0.833333 8 1 0.0684485 184 6 1.0000000 14 1 0.9744216 76 2 0.0277778 19 2 0.037500 37 2 0.147549 75 2 0.582418 35 2 0.8750000 14 2 0.9555556 59 6 0.1213675 44 2 0.1522436 29 2 0.0083333 51 2 1.0000000 36 2 0.9772727 36 2 0.0699405 192 6 0.013889 67 2 0.000000 36 2 0.334967 237 6 0.000000 58 6 0.120856 44 2 0.000000 119 6 0.544663 301 6 0.272875 225 6 0.237712 267 6 0.186351 98 2 0.166553 313 6 0.4011494 0.2646465 0.1073504 0.2236601 0.244444 0.1779653 0.0000000 0.2388278 0.07399711 0.0752525 0.1200000 0.0321839 0.1449612 0.1111111 0.3257971 0.0938889 0.4296574 0.0494385 1.00000000 0.920300 0.0518519 0.0558333 0.228235 0.3677656 0.8833333 0.8577778 0.1788034 0.3179487 0.0194444 1.0000000 0.9272727 0.0000000 0.0222222 0.0000000 0.00457516 0.0000000 0.0516934 0.00000000 0.2440925 0.0578462 0.18219876 0.0600909 0.052697 2 0.2682432 0.307692 -5.3521e-02 2 0.309579 0.330575 -0.02099619 0.896109 0.276286 lowCoverage 1 1 lowCoverage 0.996340 0.192018 lowCoverage 1 1 lowCoverage -0.12927922 0.3716263 lowCoverage 1 lowCoverage 0.2682432 0.1140820 0.1886561 2 0.309579 0.174446 0.1351336 1.3908e-03 7.8479e-01 lowCoverage 5.2420e-02 1.0000e+00 lowCoverage 2.6706e-05 9.9791e-01 lowCoverage 0.0041647 1.0000e+00 lowCoverage 0.20534861 0.03071724 lowCoverage 1.000000 lowCoverage 0.2685248 0.2350498 0.09026469 2 0.326602 0.38637 -0.0597651 2.0161e-01 0.99863736 lowCoverage 1.0000e+00 1.000000 lowCoverage 3.3767e-02 9.7323e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 0.0020029 0.98388980 lowCoverage 1.00000 lowCoverage 0.307692 0.1140820 0.2404813 2 0.330575 0.174446 0.1561298 6.8344e-02 9.4588e-01 lowCoverage 1.00000000 1.0000e+00 lowCoverage 0.00016716 9.9992e-01 lowCoverage 0.020895 1.0000e+00 lowCoverage 0.3346278 0.0255933 lowCoverage 1.000000 lowCoverage 0.313115 0.2350498 0.1424717 2 0.410740 0.38637 0.0243729 2.2538e-01 9.2343e-01 lowCoverage 1.00000000 1.00000000 lowCoverage 1.2135e-02 9.9817e-01 lowCoverage 0.93343608 1.0000000 lowCoverage 0.1312821 0.3654431 lowCoverage 1 lowCoverage 0.1133094 0.2350498 -0.10076075 6 0.176668 0.38637 -0.2096988 9.7026e-01 9.9749e-04 weaklyHypometh 1.0000e+00 0.03843322 weaklyHypometh 1.0000e+00 0.00047180 weaklyHypometh 1.0000000 0.052423 weaklyHypometh -0.2033457 4.8490e-02 lowCoverage 1.000000 lowCoverage chr3 173160842 173161842 14715 TMEM212 ENSG00000186329 0.7213206 183 6 0.7372931 136 6 0.5109297 83 6 0.5804693 97 6 0.657407 49 6 0.718835 237 6 0.7227376 111 6 0.6389462 114 6 0.647981 88 6 0.582493 102 4 0.7536016 235 6 0.607937 43 4 0.7202381 119 6 0.791667 16 1 0.605006 119 6 0.5485450 38 3 0.715126 66 4 0.6991620 138 6 0.7337633 115 6 0.6119433 178 6 0.7109788 45 6 0.647312 74 6 0.740696 117 6 0.632941 77 6 0.7824405 54 6 0.6091258 146 6 0.5589213 87 6 0.7836884 56 4 0.6526887 75 6 0.6803975 183 6 0.7566953 130 6 0.7597995 272 6 0.618677 121 6 0.687088 81 5 0.602726 77 5 0.702279 43 3 0.647946 89 6 0.654276 135 6 0.733316 132 6 0.719957 166 6 0.743093 169 6 0.712269 171 6 0.751880 124 6 0.7250638 0.7016496 0.6152806 0.6758828 0.640893 0.7211602 0.6849696 0.6413117 0.68474524 0.7072551 0.7283325 0.6577320 0.7358247 0.6932633 0.7042030 0.5646621 0.6715763 0.6882831 0.73415095 0.736231 0.7242882 0.7051182 0.699580 0.7858653 0.8018686 0.7074862 0.6685462 0.8210526 0.6592348 0.6733277 0.7088727 0.7794586 0.6185243 0.6549366 0.64172759 0.7550445 0.6431471 0.62920710 0.7500985 0.7393780 0.75878079 0.7469639 0.751085 3 0.7123952 0.743161 -2.5555e-02 6 0.581744 0.664151 -0.08240700 0.889424 0.029088 weaklyHypometh 1 1 insignificant 0.897837 0.091450 insignificant 1 1 insignificant -0.02770374 0.3211087 insignificant 1 insignificant 0.7139061 0.6776557 0.0454121 6 0.692325 0.665552 0.0267727 1.5334e-02 8.9170e-01 weaklyHypermeth 3.8335e-01 1.0000e+00 insignificant 1.5299e-01 8.3557e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.01310490 0.57939010 insignificant 1.000000 insignificant 0.7139061 0.7335958 -0.04836786 6 0.692325 0.73331 -0.0409895 9.8069e-01 0.00840373 weaklyHypometh 1.0000e+00 0.560249 insignificant 9.7031e-01 8.1532e-03 weaklyHypometh 1.0000e+00 0.815322 insignificant -0.0668330 0.00156741 weaklyHypometh 0.23225 insignificant 0.746166 0.6776557 0.0743579 6 0.718868 0.665552 0.0533153 4.3995e-04 9.8763e-01 weaklyHypermeth 0.02273284 1.0000e+00 weaklyHypermeth 0.06016550 9.2595e-01 insignificant 1.000000 1.0000e+00 insignificant 0.0408086 0.1419054 insignificant 1.000000 insignificant 0.746166 0.7335958 -0.0186392 6 0.718868 0.73331 -0.0144468 4.8988e-01 9.7719e-02 insignificant 1.00000000 1.00000000 insignificant 6.1045e-01 1.6807e-01 insignificant 1.00000000 1.0000000 insignificant -0.0391293 0.1051628 insignificant 1 insignificant 0.6776557 0.7335958 -0.09164482 6 0.665552 0.73331 -0.0677622 9.5986e-01 9.0853e-03 weaklyHypometh 1.0000e+00 0.23908612 insignificant 9.6795e-01 0.12402754 insignificant 1.0000000 1.000000 insignificant -0.0799379 2.3790e-03 weaklyHypometh 0.169930 insignificant chr3 173368942 173369942 14748 FNDC3B ENSG00000075420 0.8601209 218 5 0.8148268 81 5 0.7360672 99 5 0.8682353 81 5 0.849975 60 5 0.834624 224 5 0.8410792 115 5 0.7704545 67 5 0.743954 83 5 0.827350 75 5 0.8552463 147 5 0.848485 55 5 0.8651139 82 5 NA 0 0 0.878322 79 5 0.6615385 56 5 0.644444 63 5 0.7800000 96 5 0.8278431 82 5 0.8571509 192 5 0.6539683 40 5 0.785051 49 5 0.775660 115 5 0.888889 40 5 0.8500000 34 5 0.8178120 116 5 0.8379487 70 5 0.7933333 39 5 0.8344216 93 5 0.8731666 137 5 0.8461538 97 5 0.8706428 244 5 0.756818 80 5 0.784783 69 5 0.483636 129 5 0.743164 80 5 0.814206 66 5 0.719697 110 5 0.854127 190 5 0.864608 180 5 0.883426 106 5 0.831711 170 5 0.891667 124 5 0.8528422 0.8080937 0.7258729 0.8588235 0.841090 0.8282593 0.8350919 0.7689394 0.73482263 0.8167181 0.8496687 0.8376623 0.8554791 NA 0.8696304 0.6587912 0.6428571 0.7667920 0.82152194 0.847829 0.6519274 0.7749880 0.763042 0.8809524 0.8452381 0.8084386 0.8335165 0.7865079 0.8293973 0.8674053 0.8351648 0.8638325 0.7437771 0.7753623 0.49437229 0.7271998 0.8102891 0.70524119 0.8462951 0.8559951 0.87807540 0.8241273 0.883929 5 0.8199488 0.829609 -9.3661e-03 5 0.823130 0.832308 -0.00917862 0.897591 0.457652 insignificant 1 1 insignificant 0.907165 0.314538 insignificant 1 1 insignificant -0.01024533 0.6739820 lowCoverage 1 lowCoverage 0.8199488 0.6760300 0.1392167 5 0.823130 0.682978 0.1401515 9.1599e-05 9.9920e-01 weaklyHypermeth 5.0888e-03 1.0000e+00 weaklyHypermeth 3.9541e-02 9.9315e-01 weaklyHypermeth 1.0000000 1.0000e+00 insignificant 0.09162447 0.12219838 lowCoverage 1.000000 lowCoverage 0.8199488 0.8896104 -0.03926731 5 0.823130 0.86170 -0.0385678 9.7937e-01 0.02511890 weaklyHypometh 1.0000e+00 1.000000 insignificant 9.7593e-01 1.0820e-02 weaklyHypometh 1.0000e+00 0.832292 insignificant -0.0564324 0.00773468 lowCoverage 0.55248 lowCoverage 0.829609 0.6760300 0.1493480 5 0.832308 0.682978 0.1493302 4.3074e-04 9.9860e-01 weaklyHypermeth 0.02273284 1.0000e+00 weaklyHypermeth 0.02182240 9.8271e-01 weaklyHypermeth 0.779371 1.0000e+00 insignificant 0.1018698 0.0938461 insignificant 1.000000 insignificant 0.829609 0.8896104 -0.0295267 5 0.832308 0.86170 -0.0293892 9.5260e-01 8.8018e-02 insignificant 1.00000000 1.00000000 insignificant 9.5379e-01 5.4476e-02 insignificant 1.00000000 1.0000000 insignificant -0.0461870 0.0447893 weaklyHypometh 1 insignificant 0.6760300 0.8896104 -0.17744538 5 0.682978 0.86170 -0.1787193 9.9974e-01 1.8607e-03 weaklyHypometh 1.0000e+00 0.06002165 weaklyHypometh 9.9975e-01 0.00333704 weaklyHypometh 1.0000000 0.196296 insignificant -0.1480568 2.7615e-02 weaklyHypometh 0.978153 insignificant chr3 173516942 173517942 14764 ENSG00000208521 0.6563607 91 5 0.5727183 56 5 0.4166667 9 0 0.7529221 75 5 0.544214 90 5 0.806410 60 4 0.5898990 43 5 0.5736111 55 5 0.842857 24 2 0.800000 19 2 0.7613095 64 5 0.722222 33 4 0.7204762 74 5 0.808545 77 5 0.744780 49 5 0.5750000 25 2 0.750000 44 2 0.5493872 358 4 0.7500000 22 3 0.7380952 23 3 0.7500000 12 1 1.000000 8 0 0.579834 99 5 0.646667 26 5 0.8556061 81 3 0.5277778 13 0 0.6781205 44 3 0.7592593 24 2 0.6493852 77 5 0.7361905 32 5 0.6468975 32 3 0.6736134 53 5 0.702309 81 5 0.683450 49 5 0.626667 37 3 0.500000 14 0 0.652837 95 3 0.680952 26 3 0.800735 77 5 0.764488 73 5 0.731830 85 5 0.869112 81 5 0.691111 57 5 0.7209857 0.5244473 0.5000000 0.7936862 0.796997 0.8370879 0.5847763 0.7135417 0.83035714 0.6845238 0.7915604 0.7123016 0.8067602 0.8122563 0.7948636 0.6555060 0.7519168 0.8107195 0.87797619 0.815051 0.6904141 0.9374379 0.663358 0.7136905 0.8783144 0.8214286 0.7448142 0.7341270 0.7466222 0.7776361 0.6881957 0.7105342 0.6993146 0.6909757 0.62797619 0.5000000 0.6401284 0.63988095 0.8398676 0.7472063 0.73927005 0.8834076 0.744246 0 0.7513555 0.738523 1.5845e-02 3 0.544302 0.436161 0.10814113 0.815952 0.861899 lowCoverage 1 1 lowCoverage 0.806408 0.841682 lowCoverage 1 1 lowCoverage -0.02483886 0.5829484 lowCoverage 1 lowCoverage 0.7566719 0.6721854 0.0866216 3 0.728604 0.666075 0.0625287 3.7779e-03 9.1711e-01 lowCoverage 1.2187e-01 1.0000e+00 lowCoverage 1.5143e-02 9.6586e-01 lowCoverage 0.7211123 1.0000e+00 lowCoverage 0.04273803 0.30153852 lowCoverage 1.000000 lowCoverage 0.7566719 0.8069705 -0.05496040 5 0.728604 0.78216 -0.0535555 9.5478e-01 0.02763666 weaklyHypometh 1.0000e+00 1.000000 insignificant 9.6045e-01 2.8065e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0876814 0.05086167 lowCoverage 1.00000 lowCoverage 0.743381 0.6721854 0.0676147 3 0.705655 0.666075 0.0395798 1.8491e-02 8.1050e-01 lowCoverage 0.48661400 1.0000e+00 lowCoverage 0.01089795 8.5457e-01 lowCoverage 0.454902 1.0000e+00 lowCoverage 0.0675769 0.1726732 lowCoverage 1.000000 lowCoverage 0.743381 0.8069705 -0.0644200 3 0.705655 0.78216 -0.0765044 9.7294e-01 3.8027e-02 lowCoverage 1.00000000 1.00000000 lowCoverage 8.6834e-01 1.7247e-01 lowCoverage 1.00000000 1.0000000 lowCoverage -0.0628425 0.2064505 lowCoverage 1 lowCoverage 0.6721854 0.8069705 -0.13612567 3 0.666075 0.78216 -0.1160842 9.9765e-01 5.4319e-04 lowCoverage 1.0000e+00 0.02715961 lowCoverage 9.9790e-01 0.00070478 lowCoverage 1.0000000 0.054449 lowCoverage -0.1304194 1.4157e-02 lowCoverage 0.635465 lowCoverage chr3 173521942 173522942 14765 ENSG00000208521 0.7246929 129 5 0.5805554 56 4 0.6326984 94 5 0.6583632 92 5 0.779481 53 5 0.789889 155 5 0.7650376 57 5 0.7027350 59 5 0.674202 94 5 0.766667 57 5 0.7364706 107 5 0.777778 42 5 0.8309091 52 4 0.523810 21 3 0.845701 54 5 0.7484848 38 5 0.583333 22 2 0.7098596 80 5 0.7052381 75 5 0.8027778 124 5 0.7888889 27 2 0.952381 23 2 0.665000 60 5 0.789474 28 1 0.9090909 18 2 0.6865934 100 5 0.7812782 50 5 0.8592593 41 1 0.7383333 40 2 0.6687169 117 5 0.7227289 114 5 0.7937658 187 5 0.609150 53 5 0.608333 50 5 0.644923 80 5 0.733333 19 2 0.770238 58 5 0.623706 106 5 0.725245 191 5 0.768311 153 5 0.746207 133 5 0.656607 103 5 0.788076 114 5 0.8803908 0.6883428 0.7958503 0.8206089 0.834954 0.9086912 0.7815968 0.8072120 0.80684592 0.8738095 0.8030128 0.9365079 0.9300433 0.8260672 0.8546434 0.8451659 0.8412698 0.8405721 0.86476190 0.890741 0.9132275 0.9126984 0.781270 0.9147870 0.8881542 0.9104553 0.8623201 0.9421517 0.8022222 0.8921202 0.9003715 0.8630572 0.7140367 0.8484127 0.86045421 0.7103979 0.8833333 0.70306954 0.8862036 0.9093188 0.90285714 0.8246675 0.897964 2 0.7707050 0.812422 -4.8468e-03 5 0.727445 0.721073 0.00637211 0.615432 0.421755 insignificant 1 1 insignificant 0.973271 0.057148 insignificant 1 1 insignificant -0.06269170 0.0688249 lowCoverage 1 lowCoverage 0.7707050 0.7021858 0.0820674 5 0.727445 0.637864 0.0895814 2.3884e-03 9.9996e-01 weaklyHypermeth 8.5300e-02 1.0000e+00 weaklyHypermeth 2.7753e-02 9.9905e-01 weaklyHypermeth 1.0000000 1.0000e+00 insignificant 0.05198673 0.16086468 lowCoverage 1.000000 lowCoverage 0.7707050 0.7853026 -0.02408896 5 0.727445 0.74387 -0.0164259 8.4753e-01 0.14235616 insignificant 1.0000e+00 1.000000 insignificant 8.7908e-01 1.5773e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0199551 0.51741246 lowCoverage 1.00000 lowCoverage 0.812422 0.7021858 0.0857724 5 0.721073 0.637864 0.0832093 5.8097e-03 9.9935e-01 weaklyHypermeth 0.17605154 1.0000e+00 insignificant 0.00751664 9.9989e-01 weaklyHypermeth 0.375832 1.0000e+00 insignificant 0.1146784 0.0111621 lowCoverage 0.656593 lowCoverage 0.812422 0.7853026 -0.0230341 5 0.721073 0.74387 -0.0227980 9.1320e-01 2.9887e-01 insignificant 1.00000000 1.00000000 insignificant 5.2799e-01 8.7379e-01 insignificant 1.00000000 1.0000000 insignificant 0.0427366 0.2411297 lowCoverage 1 lowCoverage 0.7021858 0.7853026 -0.10877311 5 0.637864 0.74387 -0.1060073 9.9994e-01 1.4238e-03 weaklyHypometh 1.0000e+00 0.05273279 weaklyHypometh 9.9946e-01 0.02893556 weaklyHypometh 1.0000000 0.803765 insignificant -0.0719418 7.9423e-02 lowCoverage 1.000000 lowCoverage chr3 177615142 177616142 14840 ENSG00000201452 0.6620173 198 5 0.6734961 161 5 0.7187879 116 5 0.6330420 95 5 0.788462 53 5 0.702646 361 5 0.7465873 138 5 0.7009884 115 5 0.671009 138 5 0.697580 87 5 0.6442485 135 5 0.633889 68 5 0.6187101 131 5 NA 0 0 0.705348 84 5 0.5840909 49 5 0.651738 109 5 0.7472121 125 5 0.7044697 99 5 0.7443126 328 5 0.7381699 168 5 0.729258 77 5 0.555517 118 5 0.545618 93 3 0.5911111 50 5 0.6606688 143 5 0.6014194 125 3 0.7218871 138 4 0.7607834 155 5 0.8172472 120 5 0.7238800 163 5 0.6850196 283 5 0.687846 126 5 0.635714 99 5 0.618425 91 5 0.606912 83 5 0.718992 206 3 0.687368 140 5 0.677898 165 5 0.746594 202 5 0.763203 93 5 0.735512 151 5 0.671548 158 5 0.6425621 0.6412613 0.6949212 0.5890239 0.789103 0.6901783 0.7075905 0.6630173 0.64780820 0.6439530 0.6002413 0.6210111 0.5799220 NA 0.6479531 0.4928182 0.6330632 0.7372958 0.66537727 0.728380 0.6991294 0.7073042 0.509386 0.5891619 0.6447667 0.6062194 0.5974313 0.6419669 0.6882874 0.7816860 0.6745336 0.6532781 0.6876268 0.6053929 0.62995458 0.6237069 0.6978667 0.63884723 0.6734350 0.7361181 0.73872727 0.7306261 0.641068 4 0.6980695 0.665034 1.5034e-02 5 0.697164 0.690358 0.00680571 0.279377 0.633186 insignificant 1 1 insignificant 0.675833 0.288639 insignificant 1 1 insignificant 0.00816923 0.7719310 lowCoverage 1 lowCoverage 0.6980695 0.6550336 0.0220767 5 0.697164 0.661043 0.0361209 1.2517e-03 8.5891e-01 weaklyHypermeth 5.0070e-02 1.0000e+00 weaklyHypermeth 7.4928e-02 6.8626e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.02650814 0.25462756 lowCoverage 1.000000 lowCoverage 0.6980695 0.7373212 -0.02186367 5 0.697164 0.71403 -0.0168616 7.4579e-01 0.07774700 insignificant 1.0000e+00 1.000000 insignificant 7.4258e-01 2.8487e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.0332335 0.17231707 lowCoverage 1.00000 lowCoverage 0.665034 0.6550336 0.0022353 5 0.690358 0.661043 0.0293152 4.0761e-02 5.0623e-01 weaklyHypermeth 0.94793963 1.0000e+00 insignificant 0.09666750 5.7894e-01 insignificant 1.000000 1.0000e+00 insignificant 0.0183389 0.5633073 lowCoverage 1.000000 lowCoverage 0.665034 0.7373212 -0.0386521 5 0.690358 0.71403 -0.0236673 8.3377e-01 4.9400e-02 weaklyHypometh 1.00000000 1.00000000 insignificant 7.5708e-01 1.1888e-01 insignificant 1.00000000 1.0000000 insignificant -0.0414027 0.2052223 lowCoverage 1 lowCoverage 0.6550336 0.7373212 -0.04819153 5 0.661043 0.71403 -0.0529825 9.6923e-01 3.0590e-03 weaklyHypometh 1.0000e+00 0.09269569 weaklyHypometh 9.3394e-01 0.03654436 weaklyHypometh 1.0000000 0.961694 insignificant -0.0597416 4.8703e-02 lowCoverage 1.000000 lowCoverage chr3 178337342 178338342 14869 ENSG00000200882 0.7418162 229 6 0.6955805 189 5 0.6449447 115 6 0.6820540 214 6 0.762626 78 6 0.838628 391 5 0.7691970 227 5 0.7224432 176 5 0.613203 100 5 0.830281 58 5 0.6496832 251 5 0.833333 38 5 0.7920635 95 6 0.715007 55 5 0.759524 73 5 0.7013889 37 5 NA 0 0 0.6675015 193 5 0.7269856 243 4 0.6842907 308 5 0.7642857 47 3 1.000000 1 0 0.706565 173 6 0.772727 82 5 0.6547619 16 1 0.6737897 304 6 0.7976190 59 3 0.8666667 23 3 0.9303991 230 5 0.7063292 225 6 0.6619877 254 6 0.7920673 260 5 0.755271 140 5 0.958307 110 5 0.756944 309 5 0.766667 14 1 0.732194 164 6 0.719333 325 6 0.766262 426 6 0.651503 391 6 0.674520 208 6 0.783830 275 4 0.777480 303 6 0.9343862 0.9043817 0.9100345 0.8444928 0.958453 0.8844801 0.9403108 0.8887939 0.85492026 0.9707602 0.9260250 1.0000000 0.9722306 0.9427660 0.9280702 0.8021930 NA 0.9358234 0.93182523 0.928783 0.8904910 NA 0.902150 0.8483254 0.9568078 0.9346616 0.9195478 0.9508772 0.9250371 0.9208609 0.9460034 0.9262905 0.9042234 0.9869786 0.96622807 0.9705263 0.9188300 0.97538761 0.9523897 0.9410686 0.92883502 0.9603499 0.950401 3 0.8547231 0.859618 -7.0817e-03 6 0.674957 0.674602 0.00035503 0.842150 0.152881 insignificant 1 1 insignificant 0.828279 0.022506 weaklyHypometh 1 1 insignificant -0.04934273 0.1766643 lowCoverage 1 lowCoverage 0.8547231 0.8964218 -0.0351978 5 0.674957 0.707083 -0.0321261 9.9334e-01 1.5698e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9650e-01 6.2754e-02 insignificant 1.0000000 1.0000e+00 insignificant -0.05352876 0.21437242 lowCoverage 1.000000 lowCoverage 0.8547231 0.8621335 -0.02988622 6 0.674957 0.66034 0.0146177 9.4981e-01 0.17215208 insignificant 1.0000e+00 1.000000 insignificant 9.1580e-01 2.6674e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0027953 0.93263791 lowCoverage 1.00000 lowCoverage 0.859618 0.8964218 -0.0289290 5 0.674602 0.707083 -0.0324811 8.1905e-01 3.5750e-02 weaklyHypometh 1.00000000 1.0000e+00 insignificant 0.57976921 1.1182e-01 insignificant 1.000000 1.0000e+00 insignificant -0.0041860 0.9317635 lowCoverage 1.000000 lowCoverage 0.859618 0.8621335 -0.0198821 6 0.674602 0.66034 0.0142626 7.0402e-01 3.9433e-01 insignificant 1.00000000 1.00000000 insignificant 3.2251e-01 7.1619e-01 insignificant 1.00000000 1.0000000 insignificant 0.0465474 0.2895692 lowCoverage 1 lowCoverage 0.8964218 0.8621335 0.00465731 5 0.707083 0.66034 0.0467438 4.3507e-01 9.2018e-01 insignificant 1.0000e+00 1.00000000 insignificant 1.2135e-01 0.87967037 insignificant 1.0000000 1.000000 insignificant 0.0507334 2.9613e-01 lowCoverage 1.000000 lowCoverage chr3 178559542 178560542 14895 TBL1XR1 ENSG00000177565 0.0439048 779 23 0.0076731 841 24 0.0505040 863 24 0.0043282 642 21 0.064721 587 24 0.070452 1149 24 0.0218170 870 25 0.0784874 955 24 0.038889 920 24 0.000000 996 24 0.0490333 717 24 0.024529 942 25 0.0273302 734 24 0.076923 325 12 0.062293 986 24 0.0052095 649 24 0.026989 577 21 0.0397576 698 23 0.0740741 466 24 0.0916988 848 25 0.0014245 257 19 0.073005 520 21 0.086215 648 24 0.023631 379 25 0.0555556 319 18 0.0407743 1019 24 0.0267204 675 27 0.0375000 429 22 0.0821050 522 24 0.0308033 1160 25 0.0404396 1069 24 0.0252403 908 24 0.118752 711 24 0.091534 440 24 0.133333 322 9 0.004329 241 17 0.111093 626 23 0.075893 823 23 0.094391 970 23 0.042255 801 23 0.115385 623 21 0.042308 620 21 0.139804 770 22 0.0042957 0.0053789 0.0072829 0.0066303 0.011778 0.0174526 0.0055809 0.0029699 0.00100524 0.0000000 0.0130082 0.0058758 0.0028988 0.0014512 0.0054324 0.0082989 0.0084033 0.0043144 0.00000000 0.015894 0.0045051 0.0084580 0.032725 0.0067390 0.0105220 0.0043663 0.0068816 0.0183858 0.0118934 0.0032820 0.0014889 0.0036781 0.0075394 0.0053250 0.00814917 0.0071597 0.0146671 0.00543987 0.0201030 0.0066305 0.00016390 0.0018020 0.022282 20 0.0095214 0.011260 -8.8179e-05 24 0.051006 0.041989 0.00901736 0.579418 0.838608 insignificant 1 1 insignificant 0.677812 0.806201 insignificant 1 1 insignificant -0.00068713 0.9441811 insignificant 1 insignificant 0.0095214 0.0458716 -0.0316922 23 0.051006 0.098993 -0.0479863 5.6064e-01 2.4447e-11 weaklyHypometh 1.0000e+00 1.2223e-08 weaklyHypometh 6.2858e-01 2.3988e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.04622504 0.05808044 insignificant 1.000000 insignificant 0.0095214 0.0116279 -0.00630418 22 0.051006 0.10032 -0.0493145 9.3812e-01 0.00029913 weaklyHypometh 1.0000e+00 0.059827 weaklyHypometh 9.5084e-01 1.4356e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0438977 0.08722732 insignificant 1.00000 insignificant 0.011259 0.0458426 -0.0284160 23 0.040489 0.095457 -0.0549678 8.2095e-01 3.9709e-05 weaklyHypometh 1.00000000 1.3236e-02 weaklyHypometh 0.83187387 4.8334e-01 insignificant 1.000000 1.0000e+00 insignificant -0.0455379 0.0619244 insignificant 1.000000 insignificant 0.011260 0.0116279 -0.0069508 22 0.041989 0.10032 -0.0583318 9.9418e-01 5.2136e-03 weaklyHypometh 1.00000000 0.78451478 insignificant 9.9458e-01 2.8032e-01 insignificant 1.00000000 1.0000000 insignificant -0.0432106 0.0916267 insignificant 1 insignificant 0.0458716 0.0116279 0.00091057 22 0.098993 0.10032 -0.0013281 5.8639e-01 2.7849e-03 inconclusive 1.0000e+00 0.08702717 inconclusive 9.7232e-01 0.23143612 insignificant 1.0000000 1.000000 insignificant 0.0023273 9.3367e-01 insignificant 1.000000 insignificant chr3 178559942 178560942 14896 TBL1XR1 ENSG00000177565 0.0839048 796 23 0.0066754 899 23 0.0876469 810 23 0.0065910 662 22 0.063213 564 23 0.060341 1203 24 0.0190934 857 24 0.0815062 940 23 0.040385 885 23 0.000000 932 23 0.0501057 718 23 0.021809 882 24 0.0632099 702 23 0.071429 349 13 0.063649 965 23 0.0054099 570 23 0.029336 507 19 0.0413479 697 23 0.0786713 431 23 0.0958266 904 25 0.0043283 265 18 0.030085 528 22 0.086482 641 23 0.023631 396 24 0.0579710 322 19 0.0792359 1041 23 0.0651292 686 26 0.0362069 412 21 0.0852629 515 23 0.0670845 1178 24 0.0426035 1119 23 0.0341315 947 23 0.074503 708 23 0.082564 430 23 0.083333 438 10 0.004329 241 17 0.057918 641 22 0.031429 862 23 0.098021 987 23 0.043880 814 23 0.120000 624 21 0.042308 623 22 0.145182 764 22 0.0042401 0.0055994 0.0068805 0.0075250 0.011456 0.0157887 0.0051091 0.0029315 0.00099223 0.0000000 0.0127440 0.0053889 0.0027265 0.0012573 0.0052455 0.0081915 0.0084441 0.0042585 0.00098047 0.016025 0.0060446 0.0039963 0.032743 0.0066518 0.0103858 0.0043098 0.0075914 0.0181478 0.0117395 0.0031515 0.0017176 0.0032986 0.0019663 0.0038937 0.00086281 0.0042002 0.0080541 0.00024652 0.0198428 0.0065447 0.00016178 0.0017787 0.021993 20 0.0092975 0.011681 -2.5282e-04 23 0.077778 0.052815 0.02496348 0.496823 0.830822 insignificant 1 1 insignificant 0.710785 0.747510 insignificant 1 1 insignificant -0.00250506 0.8095383 insignificant 1 insignificant 0.0092975 0.0250151 -0.0101689 23 0.077778 0.056901 0.0208771 2.4460e-01 2.2284e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 3.5363e-01 9.6296e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.00717182 0.63916794 insignificant 1.000000 insignificant 0.0091034 0.0115425 -0.00621756 22 0.051924 0.10418 -0.0522555 9.6415e-01 0.00016782 weaklyHypometh 1.0000e+00 0.041955 weaklyHypometh 9.7744e-01 1.0804e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0413705 0.11475340 insignificant 1.00000 insignificant 0.011680 0.0250000 -0.0070361 23 0.050929 0.054869 -0.0039405 5.8442e-01 3.3054e-01 insignificant 1.00000000 1.0000e+00 insignificant 0.55023503 9.8517e-01 insignificant 1.000000 1.0000e+00 insignificant -0.0046668 0.7642599 insignificant 1.000000 insignificant 0.011202 0.0115425 -0.0067405 22 0.043012 0.10418 -0.0611673 9.9443e-01 3.7935e-03 weaklyHypometh 1.00000000 0.75870418 insignificant 9.9445e-01 2.3411e-01 insignificant 1.00000000 1.0000000 insignificant -0.0388655 0.1341550 insignificant 1 insignificant 0.0250226 0.0115425 -0.00698822 22 0.059090 0.10418 -0.0450894 9.9931e-01 1.5869e-03 weaklyHypometh 1.0000e+00 0.05471991 weaklyHypometh 9.9999e-01 0.17851455 insignificant 1.0000000 1.000000 insignificant -0.0341987 2.0206e-01 insignificant 1.000000 insignificant chr3 180872242 180873242 14996 USP13 ENSG00000058056 0.6338318 158 5 0.6461839 175 7 0.6043634 95 6 0.6441431 227 6 0.701531 65 6 0.704971 262 4 0.6537395 76 5 0.6082244 146 6 0.636594 107 5 0.562698 75 2 0.5811356 228 7 0.585526 34 2 0.6717284 112 3 0.934184 67 2 0.662516 121 2 0.5555556 35 2 1.000000 5 0 0.6291243 207 4 0.5037977 118 4 0.6600370 217 6 0.6247619 66 6 0.641019 70 4 0.660075 131 5 0.678268 81 5 0.6306777 84 5 0.6527257 207 7 0.5082311 86 4 0.5222222 62 2 0.5594396 137 5 0.7069654 196 6 0.6889685 224 7 0.6039873 251 7 0.655281 194 7 0.538615 73 5 0.964583 56 4 0.610000 17 1 0.517581 203 6 0.705797 180 6 0.727262 165 5 0.681161 170 6 0.706922 196 6 0.658170 98 5 0.698293 177 7 0.8003974 0.7620958 0.7960194 0.8378929 0.881293 0.8534892 0.7581597 0.7753595 0.80061905 0.7565986 0.7761516 0.8394998 0.8342977 0.8118289 0.7966851 0.8513495 0.9085299 0.8097066 0.81710355 0.849676 0.8160000 0.8399522 0.853529 0.8951022 0.8759341 0.8308943 0.7500637 0.8438095 0.8229955 0.8619787 0.8721242 0.7989821 0.8568309 0.8341737 0.86421594 0.8889302 0.8416382 0.86664321 0.9065958 0.8785550 0.87362934 0.8878431 0.863734 2 0.7826087 0.755486 -1.8034e-02 5 0.649171 0.639629 0.00954190 0.615223 0.213324 insignificant 1 1 insignificant 0.519370 0.223677 insignificant 1 1 insignificant 0.03588248 0.2708309 lowCoverage 1 lowCoverage 0.7826087 0.7109267 -0.0429632 5 0.649171 0.652438 -0.0032672 5.7201e-01 1.6325e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 3.4006e-01 1.3937e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.00631543 0.93208579 lowCoverage 1.000000 lowCoverage 0.7826087 0.7295285 -0.06797510 5 0.649171 0.69977 -0.0506040 9.8176e-01 0.00109463 weaklyHypometh 1.0000e+00 0.156375 insignificant 9.6277e-01 3.3074e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.0353674 0.22933551 lowCoverage 1.00000 lowCoverage 0.755486 0.7109267 -0.0285253 5 0.639629 0.652438 -0.0128091 6.6362e-01 2.2635e-01 insignificant 1.00000000 1.0000e+00 insignificant 0.42929743 3.3178e-01 insignificant 1.000000 1.0000e+00 insignificant -0.0421979 0.5635372 lowCoverage 1.000000 lowCoverage 0.755486 0.7295285 -0.0444936 5 0.639629 0.69977 -0.0601459 9.8014e-01 2.7298e-02 weaklyHypometh 1.00000000 1.00000000 insignificant 8.9276e-01 8.9592e-02 insignificant 1.00000000 1.0000000 insignificant -0.0712499 0.0052478 weaklyHypometh 1 insignificant 0.7109267 0.7295285 -0.01007089 6 0.652438 0.69977 -0.0473368 8.6826e-01 9.1415e-02 insignificant 1.0000e+00 1.00000000 insignificant 6.9590e-01 0.23297147 insignificant 1.0000000 1.000000 insignificant -0.0290520 6.8345e-01 lowCoverage 1.000000 lowCoverage chr3 183924642 183925642 15016 ENSG00000213155 0.726772 133 6 0.7929349 129 6 0.4709184 46 4 0.8506876 97 5 0.688889 26 3 0.4184535 161 6 0.7967172 37 3 0.7543399 96 5 0.778956 35 3 0.5901062 59 5 0.807475 169 6 0.750000 9 1 0.6579670 90 5 0.7053571 22 2 0.8499278 32 3 0.5000000 16 2 0.942857 11 1 0.5112902 109 6 0.737302 51 5 0.7309524 109 6 0.830556 36 3 0.9848485 35 3 0.6955128 69 5 0.4654882 47 4 0.7912088 52 5 0.7668768 139 6 0.625840 52 6 0.694444 21 2 0.7965461 85 5 0.835498 129 6 0.782434 141 6 0.631578 183 6 0.6667677 153 6 0.6412730 64 6 0.423733 98 5 0.7714286 25 3 0.5875707 72 5 0.7430210 171 6 0.6756697 76 5 0.813622 102 6 0.7800870 113 5 0.7884921 45 3 0.749388 113 6 0.7555933 0.7649604 0.5946429 0.8074186 0.6989130 0.6772369 0.8056653 0.7600440 0.8027229 0.7491765 0.823921 0.771776 0.7965092 0.7757439 0.8761493 0.5906460 0.9295561 0.6555422 0.781263 0.755280 0.8403986 0.9743083 0.726589 0.7364954 0.8345676 0.7866186 0.7293798 0.735507 0.83366705 0.8620365 0.8280063 0.8212856 0.7120553 0.5672914 0.674483 0.7428421 0.735774 0.7526810 0.6972132 0.8265673 0.8163704 0.8157350 0.767977 1 0.749478 0.8038423 -0.04560326 6 0.628602 0.565435 0.06316748 0.9202595 2.1074e-02 weaklyHypometh 1.00000 0.876232 insignificant 0.9429027 0.14905296 insignificant 1 1.00000 insignificant -0.03864081 0.438818 lowCoverage 1 lowCoverage 0.7494781 0.7204117 0.04315246 6 0.628602 0.6599277 -0.0313254 1.1678e-01 5.2438e-01 insignificant 6.7857e-01 1.0000e+00 insignificant 1.7410e-01 9.4864e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0641296 3.1120e-01 lowCoverage 1.0000e+00 lowCoverage 0.7531735 0.750557 -2.6579e-02 6 0.728226 0.758298 -0.0300717 8.9198e-01 2.3997e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4604e-01 2.5775e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.05835668 0.15381459 lowCoverage 1.000000 lowCoverage 0.8038423 0.7204117 0.07942693 6 0.565435 0.6599277 -0.09449285 5.6189e-03 9.6232e-01 weaklyHypermeth 4.5314e-02 1.0000e+00 weaklyHypermeth 4.2396e-02 9.9092e-01 weaklyHypermeth 3.2612e-01 1.0000e+00 insignificant 1.0277e-01 1.3538e-01 lowCoverage 1.0000e+00 lowCoverage 0.8094262 0.750557 0.01920711 6 0.775725 0.758298 0.0174270 2.0899e-01 8.9510e-01 insignificant 1.0000e+00 1.000000 insignificant 5.7929e-01 8.8975e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0197159 0.6658366 lowCoverage 1.00000 lowCoverage 0.7245614 0.750557 -0.0778275 6 0.6859906 0.758298 -0.07230718 6.9862e-01 1.3144e-02 weaklyHypometh 1.0000e+00 1.0686e-01 insignificant 9.6854e-01 2.1132e-02 weaklyHypometh 1.0000e+00 2.1564e-01 insignificant -0.1224863 6.6083e-02 insignificant 6.4158e-01 insignificant chr3 184485842 184486842 15045 ENSG00000202502 0.758456 261 7 0.6354180 246 7 0.6189396 154 7 0.8427517 209 7 0.628987 96 7 0.7979103 287 7 0.7443659 187 7 0.6607134 146 7 0.627007 180 7 0.6863949 191 7 0.755345 202 7 0.610743 165 7 0.2766651 300 7 0.7742857 74 5 0.6014320 217 7 0.6461559 144 7 0.447373 121 5 0.4630197 258 7 0.362973 130 7 0.6385695 283 7 0.466117 34 3 0.6597723 155 7 0.7870198 170 7 0.8111111 73 6 0.4038961 47 4 0.5546024 294 7 0.606537 81 5 0.825093 58 5 0.6650854 127 7 0.483930 347 7 0.534277 258 7 0.810963 312 7 0.0068027 213 7 0.0088889 145 5 0.030303 21 2 0.0000000 53 5 0.0178571 182 7 0.0057143 233 7 0.7322367 295 7 0.702807 254 7 0.8397719 237 7 0.6300991 232 7 0.688029 240 7 0.7707602 0.6344149 0.6182805 0.8706978 0.6415754 0.8239003 0.7331285 0.6673926 0.6407931 0.7060183 0.781403 0.585126 0.2517626 0.7425945 0.6056744 0.7117979 0.4604176 0.4375739 0.313627 0.651072 0.5150099 0.6870131 0.748594 0.8496185 0.3930858 0.5295596 0.5884499 0.785028 0.66435187 0.4546238 0.5064123 0.8269819 0.0067069 0.0135994 0.039154 0.0000000 0.017606 0.0056338 0.7943117 0.7192948 0.8173536 0.6644092 0.688977 5 0.624773 0.6319018 -0.00394622 7 0.628269 0.637077 -0.00880741 0.8651886 5.7342e-01 insignificant 1.00000 1.000000 insignificant 0.8377371 0.50737158 insignificant 1 1.00000 insignificant -0.00515841 0.924719 insignificant 1 insignificant 0.6247728 0.0070838 0.62003908 7 0.628269 0.0070599 0.6212095 1.3635e-46 1.0000e+00 hypermethylated 1.1362e-44 1.0000e+00 hypermethylated 3.4440e-18 1.0000e+00 hypermethylated 6.0903e-16 1.0000e+00 hypermethylated 0.6172810 4.8924e-14 hypermethylated 2.4462e-11 hypermethylated 0.6247728 0.741653 -1.0860e-01 7 0.628269 0.711977 -0.0837076 9.5241e-01 8.0682e-03 weaklyHypometh 1.0000e+00 3.0097e-01 insignificant 9.8343e-01 2.9824e-03 weaklyHypometh 1.0000e+00 0.21303078 insignificant -0.08971358 0.08275593 insignificant 1.000000 insignificant 0.6319018 0.0070838 0.62248991 7 0.637077 0.0070599 0.63001695 3.3263e-41 1.0000e+00 hypermethylated 3.3263e-39 1.0000e+00 hypermethylated 3.8259e-14 1.0000e+00 hypermethylated 4.2511e-12 1.0000e+00 hypermethylated 6.2244e-01 1.3972e-08 hypermethylated 1.7465e-06 hypermethylated 0.6319018 0.741653 -0.09390160 7 0.637077 0.711977 -0.0749002 9.1077e-01 1.2705e-02 weaklyHypometh 1.0000e+00 0.552398 insignificant 8.9833e-01 4.2163e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.0845552 0.1481814 insignificant 1.00000 insignificant 0.0070838 0.741653 -0.7168226 7 0.0070599 0.711977 -0.70491716 1.0000e+00 8.9016e-42 hypomethylated 1.0000e+00 2.2254e-39 hypomethylated 1.0000e+00 3.2712e-11 hypomethylated 1.0000e+00 4.0890e-09 hypomethylated -0.7069945 2.7024e-05 hypomethylated 2.4568e-03 hypomethylated chr3 184556042 184557042 15051 ENSG00000202502 0.781867 108 10 0.6947908 115 6 0.5391667 59 9 0.7325009 107 9 0.621824 91 10 0.7279655 108 7 0.6608658 87 9 0.6346779 87 9 0.603030 48 5 0.8516484 56 8 0.756598 176 10 0.627500 41 5 0.7192688 131 9 0.7529412 82 8 0.5414553 77 6 0.5321429 40 3 0.714286 62 3 0.7665079 100 8 0.576912 57 7 0.5901515 73 7 0.718615 37 3 0.7575758 23 0 0.6690559 90 6 0.7088095 49 4 0.7487424 57 6 0.7222594 112 7 0.746667 45 4 0.713333 47 5 0.7562821 97 9 0.704965 94 7 0.722689 74 6 0.830000 65 5 0.7186261 111 9 0.6420616 67 8 0.697026 95 4 0.8000000 8 0 0.7479091 75 4 0.5687534 79 6 0.6929114 116 9 0.812128 127 10 0.8008316 148 10 0.7252747 50 4 0.792708 143 10 0.7915608 0.6942163 0.5444444 0.7200129 0.6948782 0.7208924 0.6438879 0.6333400 0.7123016 0.8218821 0.764081 0.617758 0.7918295 0.7062325 0.5189062 0.5399660 0.7161243 0.7713813 0.648035 0.589105 0.7902494 0.7908274 0.766186 0.7131803 0.7868190 0.7886029 0.7400794 0.699405 0.74453602 0.7205901 0.7510337 0.8472222 0.6776919 0.6314975 0.691517 0.7718931 0.767843 0.6293862 0.6875890 0.8239674 0.8194823 0.7326712 0.789916 0 0.708578 0.7893401 -0.05639488 8 0.612558 0.713734 -0.10117612 0.9986711 1.6564e-02 weaklyHypometh 1.00000 0.752903 insignificant 0.9979534 0.00213080 weaklyHypometh 1 0.34945 insignificant -0.06194448 0.013311 weaklyHypometh 1 insignificant 0.7097532 0.7034483 0.03234138 6 0.715526 0.6214572 0.0940684 6.3072e-01 9.9750e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3172e-01 8.4712e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0244243 5.4665e-01 insignificant 1.0000e+00 insignificant 0.7104953 0.801370 -7.8017e-02 10 0.701736 0.779415 -0.0776787 9.9875e-01 9.4698e-03 weaklyHypometh 1.0000e+00 3.1566e-01 insignificant 9.9386e-01 2.5472e-02 weaklyHypometh 1.0000e+00 0.77757155 insignificant -0.09346572 0.01206039 weaklyHypometh 0.376887 insignificant 0.7913486 0.7060185 0.09372849 6 0.778619 0.7000365 0.07858224 1.8159e-03 9.9959e-01 weaklyHypermeth 1.6213e-02 1.0000e+00 weaklyHypermeth 1.5556e-01 9.9800e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.7520e-02 3.2537e-01 insignificant 1.0000e+00 insignificant 0.7910828 0.801370 -0.01315478 8 0.756481 0.779415 -0.0229340 6.7112e-01 4.3038e-01 insignificant 1.0000e+00 1.000000 insignificant 4.1406e-01 6.0789e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0315212 0.2732415 insignificant 1.00000 insignificant 0.7053364 0.801370 -0.0994069 6 0.6700401 0.779415 -0.10937450 9.9889e-01 2.6057e-03 weaklyHypometh 1.0000e+00 2.9278e-02 weaklyHypometh 9.9079e-01 9.8404e-02 insignificant 1.0000e+00 7.1828e-01 insignificant -0.0690414 1.2574e-01 insignificant 9.5255e-01 insignificant chr3 184569842 184570842 15052 ENSG00000202502 0.934316 468 5 0.8510515 183 5 0.8613996 69 5 0.9899259 139 2 0.932660 53 5 0.9515540 428 5 0.9289569 97 5 0.9189610 54 5 0.951465 62 5 0.9833333 53 5 0.952756 221 5 0.925159 54 5 1.0000000 41 5 0.9000000 20 2 0.9764706 54 5 0.9600000 44 5 0.878095 40 3 0.9117960 429 5 0.889626 230 4 0.9036703 398 5 1.000000 10 1 0.7714286 15 2 0.9468391 38 2 0.9535484 73 3 0.8838095 34 4 0.9219253 233 5 1.000000 4 0 0.872222 21 3 0.8750000 54 1 0.946186 223 5 0.906075 246 5 0.942054 406 5 0.9619048 75 2 0.6048707 113 5 0.767254 367 5 0.6000000 18 1 0.7481396 170 5 0.9414627 224 5 0.9488652 385 5 0.783306 179 5 0.9727977 373 3 0.9559427 463 5 0.963177 252 5 0.9270984 0.9215842 0.9146620 0.9808314 0.9387755 0.9541255 0.9275016 0.9693878 1.0000000 0.9673469 0.968548 0.943311 1.0000000 0.8968167 0.9831933 0.9714286 0.9573638 0.9445413 0.931236 0.928715 0.9706864 0.9208153 0.940887 0.9543120 0.9040816 0.9225522 0.9528818 0.883900 0.93027211 0.9354478 0.9334368 0.9385429 0.8989310 0.5258285 0.479448 0.4408163 0.500133 0.9333786 0.9531412 0.9569631 0.9688461 0.9399230 0.934260 1 0.940070 0.9329403 0.00597782 5 0.938319 0.934895 0.00342479 0.6406100 9.3442e-01 insignificant 1.00000 1.000000 insignificant 0.4872350 0.89150899 insignificant 1 1.00000 insignificant 0.01180249 0.571454 lowCoverage 1 lowCoverage 0.9400701 0.6670114 0.26873118 5 0.938319 0.8180797 0.1202397 4.7420e-07 6.1972e-01 hypermethylated 6.3148e-06 1.0000e+00 hypermethylated 2.0442e-02 6.3636e-01 weaklyHypermeth 1.8417e-01 1.0000e+00 insignificant 0.1594546 5.4835e-02 lowCoverage 6.0556e-01 lowCoverage 0.9400701 0.956416 -1.5233e-02 5 0.938319 0.798769 0.1395506 9.9831e-01 1.0227e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.2351e-01 1.7303e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.00524207 0.89281278 lowCoverage 1.000000 lowCoverage 0.9329403 0.6670114 0.25387339 5 0.934895 0.8180797 0.11681488 8.9949e-04 5.7363e-01 hypermethylated 8.6490e-03 1.0000e+00 hypermethylated 2.8496e-02 4.8476e-01 weaklyHypermeth 2.4165e-01 1.0000e+00 insignificant 1.4765e-01 6.9625e-02 lowCoverage 6.9625e-01 lowCoverage 0.9329403 0.956416 -0.02164578 5 0.934895 0.798769 0.1361258 9.9970e-01 7.1515e-02 insignificant 1.0000e+00 1.000000 insignificant 8.6314e-01 2.6630e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0065604 0.8748616 lowCoverage 1.00000 lowCoverage 0.6670114 0.956416 -0.2912899 5 0.8180797 0.798769 0.01931096 9.8779e-01 1.1397e-02 weaklyHypometh 1.0000e+00 9.6395e-02 weaklyHypometh 7.4944e-01 2.0076e-02 weaklyHypometh 1.0000e+00 2.0912e-01 insignificant -0.1542126 6.9867e-02 lowCoverage 6.5297e-01 lowCoverage chr3 184570542 184571542 15053 ENSG00000202502 0.934316 468 5 0.8510515 183 5 0.8613996 69 5 0.9899259 139 2 0.932660 53 5 0.9515540 428 5 0.9289569 97 5 0.9189610 54 5 0.951465 62 5 0.9833333 53 5 0.952756 221 5 0.925159 54 5 1.0000000 41 5 0.9000000 20 2 0.9764706 54 5 0.9600000 44 5 0.878095 40 3 0.9117960 429 5 0.889626 230 4 0.9036703 398 5 1.000000 10 1 0.7714286 15 2 0.9468391 38 2 0.9535484 73 3 0.8838095 34 4 0.9219253 233 5 1.000000 4 0 0.872222 21 3 0.8750000 54 1 0.946186 223 5 0.906075 246 5 0.942054 406 5 0.9619048 75 2 0.6048707 113 5 0.767254 367 5 0.6000000 18 1 0.7481396 170 5 0.9414627 224 5 0.9488652 385 5 0.783306 179 5 0.9727977 373 3 0.9559427 463 5 0.963177 252 5 0.9270984 0.9215842 0.9146620 0.9808314 0.9387755 0.9541255 0.9275016 0.9693878 1.0000000 0.9673469 0.968548 0.943311 1.0000000 0.8968167 0.9831933 0.9714286 0.9573638 0.9445413 0.931236 0.928715 0.9706864 0.9208153 0.940887 0.9543120 0.9040816 0.9225522 0.9528818 0.883900 0.93027211 0.9354478 0.9334368 0.9385429 0.8989310 0.5258285 0.479448 0.4408163 0.500133 0.9333786 0.9531412 0.9569631 0.9688461 0.9399230 0.934260 1 0.940070 0.9329403 0.00597782 5 0.938319 0.934895 0.00342479 0.6406100 9.3442e-01 insignificant 1.00000 1.000000 insignificant 0.4872350 0.89150899 insignificant 1 1.00000 insignificant 0.01180249 0.571454 lowCoverage 1 lowCoverage 0.9400701 0.6670114 0.26873118 5 0.938319 0.8180797 0.1202397 4.7420e-07 6.1972e-01 hypermethylated 6.3148e-06 1.0000e+00 hypermethylated 2.0442e-02 6.3636e-01 weaklyHypermeth 1.8417e-01 1.0000e+00 insignificant 0.1594546 5.4835e-02 lowCoverage 6.0556e-01 lowCoverage 0.9400701 0.956416 -1.5233e-02 5 0.938319 0.798769 0.1395506 9.9831e-01 1.0227e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.2351e-01 1.7303e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.00524207 0.89281278 lowCoverage 1.000000 lowCoverage 0.9329403 0.6670114 0.25387339 5 0.934895 0.8180797 0.11681488 8.9949e-04 5.7363e-01 hypermethylated 8.6490e-03 1.0000e+00 hypermethylated 2.8496e-02 4.8476e-01 weaklyHypermeth 2.4165e-01 1.0000e+00 insignificant 1.4765e-01 6.9625e-02 lowCoverage 6.9625e-01 lowCoverage 0.9329403 0.956416 -0.02164578 5 0.934895 0.798769 0.1361258 9.9970e-01 7.1515e-02 insignificant 1.0000e+00 1.000000 insignificant 8.6314e-01 2.6630e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0065604 0.8748616 lowCoverage 1.00000 lowCoverage 0.6670114 0.956416 -0.2912899 5 0.8180797 0.798769 0.01931096 9.8779e-01 1.1397e-02 weaklyHypometh 1.0000e+00 9.6395e-02 weaklyHypometh 7.4944e-01 2.0076e-02 weaklyHypometh 1.0000e+00 2.0912e-01 insignificant -0.1542126 6.9867e-02 lowCoverage 6.5297e-01 lowCoverage chr3 184905742 184906742 15068 YEATS2 ENSG00000163872 0.937376 252 5 0.8897338 335 5 0.8945894 153 5 0.9142857 160 5 0.924908 111 5 0.8817304 475 5 0.9160714 87 5 0.8105378 173 5 0.629305 76 5 0.8921695 105 5 0.848073 189 7 0.895556 41 5 0.9582251 146 5 0.8997114 89 5 0.9519954 121 5 0.5333333 33 3 0.777778 7 0 0.8413531 184 7 0.671705 350 5 0.8195767 357 5 0.880952 91 5 0.9030151 87 5 0.8033474 205 5 0.6989796 55 4 0.9083333 64 4 0.8783524 365 5 0.777265 260 5 0.810639 79 7 0.6696872 302 5 0.862200 333 6 0.969564 265 5 0.953950 427 5 0.9819853 172 5 0.9915598 250 5 0.922277 465 5 0.7777778 9 0 0.8121237 173 5 0.8873001 364 5 0.9119297 265 5 0.807858 259 5 0.7816017 142 5 0.6677139 132 5 0.963121 175 5 0.9199566 0.8815973 0.8580968 0.9743750 0.9599359 0.9269604 0.9031250 0.9533514 0.8772584 0.9186279 0.904237 0.866944 0.9505519 0.9670875 0.9294703 0.8134722 NA 0.9266208 0.935893 0.942018 0.9773148 0.9168749 0.938913 0.8681548 0.9331597 0.9315479 0.8988325 0.919024 0.94120368 0.9520941 0.9677131 0.9520584 0.9798560 0.9850961 0.872105 0.8555556 0.907511 0.9551085 0.9808076 0.9810426 0.9159217 0.9455988 0.950445 4 0.915505 0.9313068 -0.01481648 5 0.859102 0.844704 0.01439793 0.8117219 8.1462e-02 insignificant 1.00000 1.000000 insignificant 0.3482313 0.04421770 weaklyHypometh 1 1.00000 insignificant 0.00137684 0.970639 lowCoverage 1 lowCoverage 0.9155052 0.9267271 -0.00706916 5 0.859102 0.8839388 -0.0248368 8.2251e-01 2.5379e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9873e-01 6.8113e-03 weaklyHypometh 1.0000e+00 5.6761e-01 insignificant -0.0511032 2.6863e-01 lowCoverage 1.0000e+00 lowCoverage 0.9155052 0.947585 -3.1481e-02 5 0.859102 0.830941 0.0281605 7.7748e-01 2.3088e-02 weaklyHypometh 1.0000e+00 5.8493e-01 insignificant 7.9727e-01 6.3779e-02 insignificant 1.0000e+00 1.00000000 insignificant 0.01795591 0.76561052 lowCoverage 1.000000 lowCoverage 0.9313068 0.9267271 0.00744946 5 0.844704 0.8839388 -0.03923477 7.6279e-01 2.6324e-02 inconclusive 1.0000e+00 1.0000e+00 insignificant 9.9168e-01 1.3794e-02 inconclusive 1.0000e+00 1.0000e+00 insignificant -5.2480e-02 2.6714e-01 lowCoverage 1.0000e+00 lowCoverage 0.9313068 0.947585 -0.01728437 5 0.844704 0.830941 0.0137625 8.3653e-01 1.0776e-01 insignificant 1.0000e+00 1.000000 insignificant 6.9570e-01 3.0288e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0165791 0.7855973 insignificant 1.00000 insignificant 0.9267271 0.947585 -0.0242192 5 0.8839388 0.830941 0.05299730 2.6714e-01 7.3686e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.1421e-02 9.8253e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0690591 3.0660e-01 lowCoverage 1.0000e+00 lowCoverage chr3 184910242 184911242 15069 YEATS2 ENSG00000163872 0.778297 189 5 0.6951170 119 4 0.6527778 80 4 0.8390872 100 5 NA 0 0 0.7973363 131 5 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 1.000000 115 1 0.8125657 139 5 0.869565 23 1 0.8077922 101 4 NA 0 0 NA 0 0 0.8790909 86 4 NA 0 0 NA 0 0 0.8395439 156 5 NA 0 0 NA 0 0 NA 0 0 0.798849 169 5 0.790791 135 5 0.724495 120 5 0.7160885 115 4 NA 0 0 0.897691 79 5 0.6666667 6 1 NA 0 0 0.8668421 103 5 0.8142857 110 5 0.848019 142 5 0.8384389 142 5 0.7645455 120 5 0.861244 120 4 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0.780341 0.8093093 -0.01162722 4 0.783116 0.803918 -0.02080280 0.5999597 3.4665e-01 lowCoverage 1.00000 1.000000 lowCoverage 0.8541380 0.31315587 lowCoverage 1 1.00000 lowCoverage -0.00071647 0.986706 lowCoverage 1 lowCoverage 0.7803410 0.7854785 -0.01777718 4 0.783116 0.8054451 -0.0223295 4.9380e-01 1.9970e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.3100e-01 1.1441e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0190155 7.8256e-01 lowCoverage 1.0000e+00 lowCoverage 0.7803410 0.796530 -2.7354e-02 4 0.783116 0.828632 -0.0455167 9.5765e-01 4.2294e-02 lowCoverage 1.0000e+00 7.5525e-01 lowCoverage 9.8832e-01 4.3181e-02 lowCoverage 1.0000e+00 1.00000000 lowCoverage -0.01946915 0.61205923 lowCoverage 1.000000 lowCoverage 0.8093093 0.7854785 -0.00390606 5 0.803918 0.8054451 -0.00152668 4.1423e-01 7.6223e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.7323e-01 7.1347e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.9732e-02 7.6541e-01 lowCoverage 1.0000e+00 lowCoverage 0.8093093 0.796530 -0.01815337 5 0.803918 0.828632 -0.0247139 9.4964e-01 1.6607e-01 insignificant 1.0000e+00 1.000000 insignificant 9.4981e-01 1.1477e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0187527 0.5641924 lowCoverage 1.00000 lowCoverage 0.7854785 0.796530 -0.0102762 5 0.8054451 0.828632 -0.02318718 6.3233e-01 8.6611e-02 insignificant 1.0000e+00 5.4817e-01 insignificant 4.0955e-01 2.2712e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0384847 5.5330e-01 lowCoverage 1.0000e+00 lowCoverage chr3 185206842 185207842 15078 PARL ENSG00000175193 0.682156 112 6 0.6243687 89 6 0.5083333 39 6 0.6074439 96 3 0.685714 37 6 0.7109307 134 6 0.6125408 63 3 0.7416667 79 6 0.444444 30 3 0.7777778 7 0 0.701817 148 6 0.566667 19 3 0.7060440 47 3 0.8333333 21 0 0.7449495 66 6 0.5000000 21 0 0.666667 3 0 0.6722727 138 3 0.794444 35 6 0.7015873 83 6 0.857143 14 0 0.9166667 9 0 0.5000000 45 3 0.8555556 27 3 0.7081871 76 6 0.7564103 77 6 0.705556 30 5 0.650000 17 1 0.6913793 101 6 0.637294 73 6 0.672854 77 6 0.785131 87 6 0.7465278 78 6 0.6489899 51 6 0.615993 58 6 0.6388889 21 0 0.4536797 49 6 0.6342593 78 6 0.8500000 102 3 0.722538 129 6 0.7270678 133 6 0.7341270 69 3 0.705019 122 6 0.5951811 0.5982579 0.4616935 0.6357196 0.6290323 0.6784073 0.5885713 0.7244624 0.5080645 0.7610773 0.645717 0.512903 0.6404644 0.7419355 0.7289834 0.4139785 0.6176641 0.6576155 0.814516 0.674347 0.7473118 0.8709677 0.589862 0.8413978 0.6220855 0.7506203 0.6188172 0.704269 0.67130145 0.6060435 0.6891496 0.7736401 0.6708333 0.6131476 0.604513 0.5712366 0.439953 0.5748208 0.7763441 0.7044538 0.6863454 0.6816436 0.668087 0 0.649566 0.6962025 -0.04308466 6 0.678844 0.714125 -0.03528147 0.9839716 7.3654e-02 insignificant 1.00000 1.000000 insignificant 0.9952223 0.03212288 weaklyHypometh 1 1.00000 insignificant -0.06385671 0.125933 lowCoverage 1 lowCoverage 0.6495659 0.6119403 0.05414589 6 0.678844 0.6285957 0.0502478 6.2180e-02 9.8526e-01 insignificant 3.8621e-01 1.0000e+00 insignificant 1.2068e-01 9.6482e-01 insignificant 8.3226e-01 1.0000e+00 insignificant 0.0411014 3.8439e-01 lowCoverage 1.0000e+00 lowCoverage 0.6495659 0.697297 -5.7906e-02 6 0.678844 0.736108 -0.0572649 9.7767e-01 4.0258e-02 weaklyHypometh 1.0000e+00 7.5511e-01 insignificant 9.2613e-01 1.4419e-02 weaklyHypometh 1.0000e+00 0.55456904 insignificant -0.08359242 0.03374314 lowCoverage 0.613512 lowCoverage 0.6962025 0.6119403 0.09723595 6 0.714125 0.6285957 0.08552930 2.6468e-03 9.9793e-01 weaklyHypermeth 2.2818e-02 1.0000e+00 weaklyHypermeth 1.4732e-03 9.9951e-01 weaklyHypermeth 2.0750e-02 1.0000e+00 weaklyHypermeth 1.0496e-01 6.1605e-02 lowCoverage 6.5545e-01 lowCoverage 0.6962025 0.697297 -0.01531321 6 0.714125 0.736108 -0.0219835 8.2217e-01 1.6656e-01 insignificant 1.0000e+00 1.000000 insignificant 7.0705e-01 3.9998e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0197357 0.6460927 lowCoverage 1.00000 lowCoverage 0.6119403 0.697297 -0.1112893 6 0.6285957 0.736108 -0.10751275 9.9972e-01 9.8809e-04 weaklyHypometh 1.0000e+00 1.2668e-02 weaklyHypometh 9.9883e-01 1.6556e-03 weaklyHypometh 1.0000e+00 3.2463e-02 weaklyHypometh -0.1246939 2.7109e-02 lowCoverage 3.7235e-01 lowCoverage chr3 185549242 185550242 15084 FAM131A ENSG00000175182 0.879548 207 5 0.9039130 87 5 0.6047619 39 5 0.9095960 187 5 1.000000 28 3 0.9354887 137 5 0.7333333 30 3 0.9454188 94 5 0.896429 37 5 0.8869697 43 5 0.911884 135 5 0.860000 23 3 0.9333333 122 5 0.9800000 26 2 0.8454545 34 2 0.8000000 8 0 0.960000 16 1 0.8787929 329 5 0.948235 57 5 0.9787115 88 5 0.695238 23 2 0.9638889 69 5 0.9741667 59 5 0.9285714 65 5 1.0000000 21 3 0.8970181 150 5 0.808947 41 5 1.000000 19 2 0.9700000 74 5 0.962830 165 5 0.931251 117 5 0.950958 183 5 0.8358974 61 5 0.5581818 34 3 0.966667 31 5 1.0000000 4 0 0.8275524 58 5 0.9543103 120 5 0.9882251 107 3 0.928449 149 5 0.9652439 127 3 0.9242424 78 5 0.931436 165 5 0.8932729 0.8882710 0.6334441 0.9132899 1.0000000 0.9366148 0.7248062 0.9481614 0.8999169 0.8685694 0.917474 0.837209 0.9341085 0.9825581 0.8446089 0.8255814 0.9534884 0.8982292 0.939808 0.978666 0.6650055 0.9580103 0.969961 0.9410299 1.0000000 0.8986644 0.8027618 1.000000 0.96511628 0.9690904 0.9313817 0.9535019 0.8181276 0.5443975 0.961240 0.8812295 0.834363 0.9599539 0.9863083 0.9390185 0.9595859 0.9390416 0.937716 0 0.910828 0.9320487 -0.02204294 5 0.904531 0.929639 -0.02510795 0.9638215 1.0745e-01 insignificant 1.00000 1.000000 insignificant 0.9884471 0.12549116 insignificant 1 1.00000 insignificant -0.03397886 0.311371 lowCoverage 1 lowCoverage 0.9108280 0.8668831 0.04114392 5 0.904531 0.8709613 0.0335699 6.5137e-02 8.1293e-01 insignificant 4.0208e-01 1.0000e+00 insignificant 2.4682e-01 7.4065e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0324921 6.5708e-01 lowCoverage 1.0000e+00 lowCoverage 0.9108280 0.955272 -3.3162e-02 5 0.904531 0.936584 -0.0320526 9.7943e-01 1.2685e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.1351e-01 2.5835e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.05792572 0.02540417 lowCoverage 0.528928 lowCoverage 0.9320487 0.8668831 0.06431404 5 0.929639 0.8709613 0.05867790 2.1743e-02 9.7887e-01 weaklyHypermeth 1.5099e-01 1.0000e+00 insignificant 9.1824e-02 9.2014e-01 insignificant 6.3327e-01 1.0000e+00 insignificant 6.6471e-02 3.8391e-01 lowCoverage 1.0000e+00 lowCoverage 0.9320487 0.955272 -0.01568492 5 0.929639 0.936584 -0.0069446 3.3730e-01 4.7171e-01 insignificant 1.0000e+00 1.000000 insignificant 5.7197e-01 6.1412e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0239469 0.4140152 lowCoverage 1.00000 lowCoverage 0.8668831 0.955272 -0.0839122 5 0.8709613 0.936584 -0.06562254 8.9409e-01 5.5315e-02 insignificant 1.0000e+00 3.6782e-01 insignificant 9.2152e-01 9.1958e-02 insignificant 1.0000e+00 6.8117e-01 insignificant -0.0904178 2.3530e-01 lowCoverage 1.0000e+00 lowCoverage chr3 185951342 185952342 15091 MAGEF1 ENSG00000177383 0.820040 175 5 0.6789579 273 6 0.5826720 60 5 0.6781605 189 6 0.524206 64 6 0.8063910 259 6 0.6692251 83 3 0.7221314 98 5 0.634286 42 3 0.7696970 29 1 0.898977 290 8 0.527273 25 3 0.7892361 92 4 0.6960784 51 3 0.9236111 35 1 0.7083333 19 1 NA 0 0 0.4862260 153 3 0.921352 77 3 0.8028024 151 5 0.713333 52 5 0.4590909 43 3 0.8759442 105 4 0.7973214 73 5 0.7500000 37 3 0.7851784 260 6 0.673852 58 4 0.937500 21 1 0.8496324 104 3 0.793119 292 6 0.819289 274 6 0.877104 172 6 0.7024486 146 6 0.8466117 77 3 0.954301 221 5 0.9687500 14 1 0.6466840 186 5 0.7759140 249 6 0.6396520 253 5 0.490488 244 6 0.3999990 256 5 0.1190048 164 3 0.497622 242 6 0.6514950 0.5579798 0.5753045 0.5718275 0.5073643 0.7009967 0.7441860 0.7296844 0.5398671 0.6703665 0.735190 0.562368 0.6565730 0.6590287 0.5949612 0.3508880 NA 0.5153455 0.866038 0.697417 0.3620155 0.2137421 0.741817 0.4249169 0.5484496 0.6241699 0.5442276 0.802822 0.71735636 0.7512023 0.6752790 0.8070237 0.7083963 0.6428784 0.980620 0.9386139 0.754683 0.9034509 0.4078499 0.2107820 0.3674086 0.2830712 0.394996 1 0.696998 0.7348993 -0.02867685 5 0.776706 0.811900 -0.03519428 0.6667743 1.4487e-02 weaklyHypometh 1.00000 0.737404 insignificant 0.4830333 0.13741918 insignificant 1 1.00000 insignificant -0.05973720 0.213667 lowCoverage 1 lowCoverage 0.6969977 0.8185890 -0.11629648 5 0.776706 0.8195716 -0.0428657 9.7190e-01 1.8520e-02 weaklyHypometh 1.0000e+00 7.7168e-01 insignificant 7.8632e-01 2.0292e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0979083 1.4857e-01 lowCoverage 1.0000e+00 lowCoverage 0.6969977 0.389465 3.0489e-01 5 0.776706 0.522731 0.2539749 3.4163e-13 1.0000e+00 hypermethylated 6.8327e-11 1.0000e+00 hypermethylated 8.8930e-08 1.0000e+00 hypermethylated 1.4822e-05 1.00000000 hypermethylated 0.28852327 0.02535469 lowCoverage 0.528928 lowCoverage 0.7348993 0.8185890 -0.06181941 5 0.811900 0.8195716 -0.00767138 4.0940e-01 7.8524e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 6.6732e-01 1.3875e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -3.8171e-02 5.6823e-01 lowCoverage 1.0000e+00 lowCoverage 0.7348993 0.389465 0.35232047 5 0.811900 0.522731 0.2891692 2.7900e-17 9.9745e-01 hypermethylated 1.3950e-14 1.000000 hypermethylated 7.2490e-07 9.9732e-01 hypermethylated 2.4163e-04 1.000000 hypermethylated 0.3482605 0.0118261 lowCoverage 0.60861 lowCoverage 0.8185890 0.389465 0.4076754 5 0.8195716 0.522731 0.29684060 4.0052e-10 1.0000e+00 hypermethylated 8.0104e-08 1.0000e+00 hypermethylated 4.1255e-05 1.0000e+00 hypermethylated 1.0314e-02 1.0000e+00 hypermethylated 0.3864316 7.0282e-03 lowCoverage 1.3806e-01 lowCoverage chr3 186662842 186663842 15107 ENSG00000208382 0.793692 157 6 0.6761851 146 6 0.7019841 84 6 0.8068910 157 6 0.724833 65 6 0.7496596 255 6 0.6742216 80 5 0.7854563 105 5 0.718013 60 6 0.7905773 67 6 0.735933 177 6 0.643551 43 3 0.7021933 103 6 0.4375000 10 0 0.6271230 77 6 0.8187675 56 5 0.320000 38 3 0.8400232 170 6 0.851104 154 6 0.8078112 178 6 0.708333 38 3 0.7202395 83 6 0.7928442 125 6 0.6097222 55 4 0.7184193 63 5 0.6972177 123 6 0.665659 57 5 0.802083 44 4 0.7610424 120 6 0.702579 138 6 0.760214 146 6 0.772358 220 6 0.6376755 101 6 0.6080062 95 6 0.580116 119 6 0.6851852 44 2 0.6415890 58 3 0.7292573 135 6 0.8256291 160 6 0.833234 193 6 0.8286542 141 6 0.8902184 122 6 0.764972 165 6 0.8052633 0.7254082 0.7179739 0.8165535 0.7378618 0.7738022 0.7360752 0.7560131 0.7894633 0.8014866 0.737551 0.672597 0.7576172 0.4160571 0.6759699 0.8181414 0.4515878 0.8305652 0.816791 0.800408 0.7732843 0.7908740 0.764784 0.7199346 0.7823491 0.7900884 0.7625501 0.801062 0.77043722 0.7001810 0.7387883 0.7870934 0.7028783 0.6339660 0.562593 0.6982571 0.663730 0.7211824 0.8168483 0.8382362 0.8321127 0.8709960 0.769938 3 0.773602 0.7838284 0.00634578 6 0.760996 0.748937 0.01205903 0.5297179 6.3853e-01 insignificant 1.00000 1.000000 insignificant 0.4870428 0.53797942 insignificant 1 1.00000 insignificant -0.01561673 0.644816 insignificant 1 insignificant 0.7736022 0.6576087 0.11454171 6 0.760996 0.6405394 0.1204565 7.0987e-08 1.0000e+00 weaklyHypermeth 1.0288e-06 1.0000e+00 weaklyHypermeth 5.2584e-05 9.9982e-01 weaklyHypermeth 1.0112e-03 1.0000e+00 weaklyHypermeth 0.0633044 9.8850e-02 lowCoverage 9.0688e-01 lowCoverage 0.7736022 0.829706 -5.4912e-02 6 0.760996 0.823162 -0.0621662 9.9512e-01 1.9124e-02 weaklyHypometh 1.0000e+00 5.1686e-01 insignificant 9.9936e-01 4.0937e-03 weaklyHypometh 1.0000e+00 0.24711751 insignificant -0.11826558 0.00328503 weaklyHypometh 0.182485 insignificant 0.7838284 0.6576087 0.10802187 6 0.748937 0.6405394 0.10839746 1.7738e-08 9.9998e-01 weaklyHypermeth 3.3468e-07 1.0000e+00 weaklyHypermeth 4.3670e-06 9.9540e-01 weaklyHypermeth 1.1197e-04 1.0000e+00 weaklyHypermeth 7.8921e-02 1.4835e-02 lowCoverage 2.3226e-01 lowCoverage 0.7838284 0.829706 -0.05742766 6 0.748937 0.823162 -0.0742252 9.9816e-01 7.3755e-03 weaklyHypometh 1.0000e+00 0.368776 insignificant 9.9923e-01 1.3333e-03 weaklyHypometh 1.0000e+00 0.222213 insignificant -0.1026488 0.0027090 weaklyHypometh 0.40961 insignificant 0.6576087 0.829706 -0.1738224 6 0.6405394 0.823162 -0.18262268 1.0000e+00 3.7264e-09 weaklyHypometh 1.0000e+00 1.2421e-07 weaklyHypometh 1.0000e+00 9.3922e-08 weaklyHypometh 1.0000e+00 6.7087e-06 weaklyHypometh -0.1815699 1.6884e-04 lowCoverage 9.9320e-03 lowCoverage chr3 186759242 186760242 15115 LIPH ENSG00000163898 0.519841 177 9 0.3744951 221 9 0.4000545 219 9 0.5718915 148 6 0.591246 58 6 0.4738889 180 8 0.5636183 55 6 0.7726873 122 6 0.789683 38 6 0.6943311 50 6 0.796468 225 6 0.833333 12 0 0.7537037 91 6 0.7023810 49 6 0.8708333 53 6 0.9583333 12 0 0.500000 16 0 0.5606329 141 6 0.787037 82 2 0.5305410 118 6 0.380952 23 2 0.8075397 56 6 0.5102881 134 9 0.6203704 39 2 0.9444444 34 6 0.5022480 274 9 0.929167 45 2 0.625000 17 0 0.7057387 81 6 0.428038 297 9 0.462204 223 9 0.588961 140 8 0.3970370 193 9 0.6730769 76 6 0.444653 186 9 NA 0 0 0.3550595 35 4 0.4989286 183 9 0.5498209 104 6 0.512711 159 8 0.6072531 107 6 0.8284900 63 6 0.570682 159 9 0.7805944 0.6709010 0.6291132 0.8542659 0.5881896 0.7945258 0.6646270 0.7604454 0.7948718 0.8314408 0.815721 0.897436 0.8051282 0.7478632 0.8506410 0.9326923 0.6740277 0.8751684 0.797009 0.761790 0.6089744 0.8342491 0.805840 0.6944444 0.9658120 0.7743386 0.8855769 0.801282 0.71131539 0.6702622 0.7074584 0.8347663 0.6154410 0.7135108 0.755609 NA 0.542735 0.7632326 0.6858918 0.7956591 0.7661020 0.8240850 0.815329 0 0.658442 0.5113720 0.02973354 8 0.424873 0.404567 0.02030563 0.1652726 9.6521e-01 insignificant 1.00000 1.000000 insignificant 0.6322677 0.87325727 insignificant 1 1.00000 insignificant 0.02683742 0.686597 insignificant 1 insignificant 0.6584422 0.4591382 0.07805184 8 0.424873 0.3710615 0.0538113 3.4566e-02 9.9980e-01 weaklyHypermeth 2.3044e-01 1.0000e+00 insignificant 1.6159e-02 9.9998e-01 weaklyHypermeth 1.5537e-01 1.0000e+00 insignificant 0.1784990 2.7654e-02 weaklyHypermeth 3.6705e-01 insignificant 0.6610005 0.680743 -1.7668e-02 8 0.519289 0.537434 -0.0181448 8.8579e-01 5.0303e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.9650e-01 8.6171e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.03845858 0.58119325 insignificant 1.000000 insignificant 0.5113720 0.4591382 0.04181921 9 0.404567 0.3710615 0.03350562 3.7306e-01 9.9955e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.0469e-02 1.0000e+00 insignificant 5.6668e-01 1.0000e+00 insignificant 1.5166e-01 7.4985e-02 insignificant 7.2801e-01 insignificant 0.5132548 0.680743 -0.05207004 8 0.494471 0.537434 -0.0429628 8.6438e-01 1.3879e-01 insignificant 1.0000e+00 1.000000 insignificant 6.3187e-01 6.5264e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0116212 0.8839395 insignificant 1.00000 insignificant 0.4611940 0.680743 -0.0998630 8 0.4535196 0.537434 -0.08391407 9.8355e-01 9.6226e-03 weaklyHypometh 1.0000e+00 8.4409e-02 weaklyHypometh 9.9802e-01 3.2195e-02 weaklyHypometh 1.0000e+00 2.9250e-01 insignificant -0.1400405 1.1258e-01 insignificant 8.9846e-01 insignificant chr3 186759342 186760342 15116 LIPH ENSG00000163898 0.519841 177 9 0.3744951 221 9 0.4000545 219 9 0.5718915 148 6 0.591246 58 6 0.4738889 180 8 0.5636183 55 6 0.7726873 122 6 0.789683 38 6 0.6943311 50 6 0.796468 225 6 0.833333 12 0 0.7537037 91 6 0.7023810 49 6 0.8708333 53 6 0.9583333 12 0 0.500000 16 0 0.5606329 141 6 0.787037 82 2 0.5305410 118 6 0.380952 23 2 0.8075397 56 6 0.5102881 134 9 0.6203704 39 2 0.9444444 34 6 0.5022480 274 9 0.929167 45 2 0.625000 17 0 0.7057387 81 6 0.428038 297 9 0.462204 223 9 0.588961 140 8 0.3970370 193 9 0.6730769 76 6 0.444653 186 9 NA 0 0 0.3550595 35 4 0.4989286 183 9 0.5498209 104 6 0.512711 159 8 0.6072531 107 6 0.8284900 63 6 0.570682 159 9 0.7805944 0.6709010 0.6291132 0.8542659 0.5881896 0.7945258 0.6646270 0.7604454 0.7948718 0.8314408 0.815721 0.897436 0.8051282 0.7478632 0.8506410 0.9326923 0.6740277 0.8751684 0.797009 0.761790 0.6089744 0.8342491 0.805840 0.6944444 0.9658120 0.7743386 0.8855769 0.801282 0.71131539 0.6702622 0.7074584 0.8347663 0.6154410 0.7135108 0.755609 NA 0.542735 0.7632326 0.6858918 0.7956591 0.7661020 0.8240850 0.815329 0 0.658442 0.5113720 0.02973354 8 0.424873 0.404567 0.02030563 0.1652726 9.6521e-01 insignificant 1.00000 1.000000 insignificant 0.6322677 0.87325727 insignificant 1 1.00000 insignificant 0.02683742 0.686597 insignificant 1 insignificant 0.6584422 0.4591382 0.07805184 8 0.424873 0.3710615 0.0538113 3.4566e-02 9.9980e-01 weaklyHypermeth 2.3044e-01 1.0000e+00 insignificant 1.6159e-02 9.9998e-01 weaklyHypermeth 1.5537e-01 1.0000e+00 insignificant 0.1784990 2.7654e-02 weaklyHypermeth 3.6705e-01 insignificant 0.6610005 0.680743 -1.7668e-02 8 0.519289 0.537434 -0.0181448 8.8579e-01 5.0303e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.9650e-01 8.6171e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.03845858 0.58119325 insignificant 1.000000 insignificant 0.5113720 0.4591382 0.04181921 9 0.404567 0.3710615 0.03350562 3.7306e-01 9.9955e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.0469e-02 1.0000e+00 insignificant 5.6668e-01 1.0000e+00 insignificant 1.5166e-01 7.4985e-02 insignificant 7.2801e-01 insignificant 0.5132548 0.680743 -0.05207004 8 0.494471 0.537434 -0.0429628 8.6438e-01 1.3879e-01 insignificant 1.0000e+00 1.000000 insignificant 6.3187e-01 6.5264e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0116212 0.8839395 insignificant 1.00000 insignificant 0.4611940 0.680743 -0.0998630 8 0.4535196 0.537434 -0.08391407 9.8355e-01 9.6226e-03 weaklyHypometh 1.0000e+00 8.4409e-02 weaklyHypometh 9.9802e-01 3.2195e-02 weaklyHypometh 1.0000e+00 2.9250e-01 insignificant -0.1400405 1.1258e-01 insignificant 8.9846e-01 insignificant chr3 186859642 186860642 15118 SENP2 ENSG00000163904 0.791667 35 2 0.6352259 77 6 0.8571429 23 4 0.7499008 91 6 0.697959 40 6 0.7264957 68 6 0.5204082 31 2 0.9214286 87 4 0.595833 30 3 0.6666667 15 0 0.773841 154 6 0.673611 37 4 0.8134921 38 6 0.5000000 18 0 0.7833333 24 4 NA 0 0 1.000000 2 0 0.7569444 61 6 0.708333 18 0 0.6626984 35 6 0.750000 20 0 1.0000000 5 0 0.6161616 34 2 0.9333333 22 4 0.8833333 31 4 0.7254960 85 6 0.915344 37 4 0.555556 8 0 0.6712963 48 6 0.638047 54 5 0.720539 64 6 0.821429 53 4 0.6079365 56 6 0.6111111 56 4 0.695139 85 6 0.8888889 10 0 0.6746032 35 6 0.7113095 44 6 0.7853535 47 6 0.731481 50 6 0.8444444 38 6 0.7777778 16 0 0.767196 75 6 0.8125000 0.6358745 0.8000000 0.7523065 0.8357143 0.7355128 0.6428571 0.9012500 0.6118750 0.7000000 0.785329 0.647917 0.8482143 0.5500000 0.7875000 NA 0.8004218 0.7729167 0.687500 0.681190 0.7750000 0.9488923 0.637121 0.9300000 0.8700000 0.7352083 0.9015873 0.800315 0.69513889 0.6810606 0.7224116 0.7937500 0.5472222 0.6229167 0.695625 0.9166667 0.678452 0.7477679 0.8056818 0.7236111 0.8583333 0.8166667 0.752183 0 0.725113 0.7527115 -0.02457289 6 0.678452 0.690751 -0.01229912 0.8664974 1.4997e-01 insignificant 1.00000 1.000000 insignificant 0.9789930 0.14300355 insignificant 1 1.00000 insignificant -0.04105431 0.417610 lowCoverage 1 lowCoverage 0.7251131 0.6538462 0.07362803 6 0.678452 0.7014864 -0.0230343 3.0358e-02 9.5000e-01 weaklyHypermeth 2.0652e-01 1.0000e+00 insignificant 1.6324e-01 9.3504e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0299922 5.6768e-01 lowCoverage 1.0000e+00 lowCoverage 0.7269625 0.774336 -3.7694e-02 6 0.724861 0.768122 -0.0432609 8.9411e-01 1.1782e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7162e-01 1.5820e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.05309370 0.13309399 lowCoverage 1.000000 lowCoverage 0.7527115 0.6538462 0.09780434 6 0.690751 0.7014864 -0.01073518 2.2506e-04 9.8643e-01 weaklyHypermeth 2.4200e-03 1.0000e+00 weaklyHypermeth 4.8395e-03 9.9779e-01 weaklyHypermeth 5.4376e-02 1.0000e+00 weaklyHypermeth 7.1047e-02 2.4480e-01 lowCoverage 1.0000e+00 lowCoverage 0.7554585 0.774336 -0.01004568 6 0.750321 0.768122 -0.0178009 7.2933e-01 2.3249e-01 insignificant 1.0000e+00 1.000000 insignificant 8.7652e-01 5.3139e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0120394 0.7908481 lowCoverage 1.00000 lowCoverage 0.6526316 0.774336 -0.1159276 6 0.6517341 0.768122 -0.11638759 9.9851e-01 9.9420e-05 weaklyHypometh 1.0000e+00 1.7141e-03 weaklyHypometh 9.9906e-01 4.6693e-03 weaklyHypometh 1.0000e+00 7.9140e-02 weaklyHypometh -0.0830859 1.1382e-01 lowCoverage 8.9846e-01 lowCoverage chr3 187047042 187048042 15134 IGF2BP2 ENSG00000073792 0.667271 151 6 0.6272050 93 6 0.6851852 42 6 0.6931217 155 6 0.728098 72 6 0.7599359 82 6 0.7433802 82 6 0.7817460 29 3 0.870370 30 3 0.7500000 30 3 0.578084 91 6 0.650000 21 3 0.8769231 91 8 0.8861607 31 3 0.6770833 41 3 0.5833333 21 3 0.000000 3 0 0.6712911 219 5 0.622222 21 3 0.5937500 51 6 0.633333 23 2 0.8333333 12 0 0.4672619 77 3 0.7079365 41 6 0.7294974 75 6 0.7178441 60 6 0.841270 29 2 0.888889 9 0 0.3975446 50 3 0.699905 67 3 0.800214 67 6 0.745370 51 6 0.5818903 100 6 0.4615801 88 6 0.469786 83 6 0.6666667 3 0 0.2662698 43 6 0.5090326 73 6 0.4359375 82 6 0.607955 90 6 0.6409041 168 6 0.6885057 98 3 0.644351 94 6 0.6675735 0.7410068 0.6759259 0.7433862 0.6413818 0.6882479 0.7797033 0.7797619 0.7661021 0.7916667 0.696963 0.725000 0.8589744 0.7723214 0.6875000 0.6250000 0.5684825 0.6840162 0.816667 0.645833 0.5083333 0.9166667 0.684524 0.8219577 0.7192460 0.8909646 0.8055556 0.831442 0.62842262 0.7332624 0.7927350 0.7430556 0.6506133 0.5792749 0.741228 0.6957487 0.410317 0.7453380 0.6552083 0.6827652 0.7215900 0.7549808 0.692017 0 0.720534 0.7344029 -0.02604121 6 0.744350 0.705417 0.03893243 0.5834243 4.9730e-01 insignificant 1.00000 1.000000 insignificant 0.5699463 0.50141230 insignificant 1 1.00000 insignificant -0.03294183 0.581075 lowCoverage 1 lowCoverage 0.7190760 0.5717949 0.12104846 6 0.715944 0.4162828 0.2996614 1.3697e-09 9.9998e-01 weaklyHypermeth 2.3214e-08 1.0000e+00 weaklyHypermeth 1.3342e-04 9.9840e-01 weaklyHypermeth 2.3407e-03 1.0000e+00 weaklyHypermeth 0.1797206 2.3828e-02 lowCoverage 3.4533e-01 lowCoverage 0.7194299 0.686090 2.8846e-02 6 0.722104 0.477822 0.2442822 2.1790e-03 9.1589e-01 weaklyHypermeth 6.4088e-02 1.0000e+00 weaklyHypermeth 8.1628e-03 9.8476e-01 weaklyHypermeth 2.8148e-01 1.00000000 insignificant 0.06872753 0.27454308 lowCoverage 1.000000 lowCoverage 0.7339286 0.5717949 0.15926545 6 0.672686 0.4162828 0.25640319 6.2211e-07 9.9999e-01 weaklyHypermeth 9.5710e-06 1.0000e+00 weaklyHypermeth 2.6502e-03 9.9996e-01 weaklyHypermeth 3.3704e-02 1.0000e+00 weaklyHypermeth 2.1266e-01 1.0975e-02 lowCoverage 1.8923e-01 lowCoverage 0.7338129 0.686090 0.08315927 6 0.663022 0.477822 0.1852000 2.6947e-03 9.6280e-01 weaklyHypermeth 7.6991e-02 1.000000 weaklyHypermeth 1.3997e-02 9.9924e-01 weaklyHypermeth 3.6982e-01 1.000000 insignificant 0.1016694 0.1224570 lowCoverage 1.00000 lowCoverage 0.5736434 0.686090 -0.0687743 6 0.4266515 0.477822 -0.05117030 9.9273e-01 1.4259e-01 insignificant 1.0000e+00 8.3876e-01 insignificant 9.6585e-01 4.4977e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.1109931 1.4998e-01 insignificant 1.0000e+00 insignificant chr3 187100842 187101842 15136 IGF2BP2 ENSG00000073792 0.747347 332 13 0.6966527 276 12 0.7249560 128 9 0.7981912 299 13 0.750160 123 11 0.7615877 479 10 0.7838164 126 10 0.7890774 317 11 0.784730 140 10 0.8420539 148 11 0.653305 506 15 0.548718 36 2 0.8162511 252 11 0.6410577 114 9 0.8409984 140 7 0.7333333 47 4 0.814864 200 2 0.6120371 323 12 0.786995 319 13 0.6980202 352 10 0.704175 106 8 0.8413422 124 7 0.6989081 187 10 0.7254189 208 9 0.6558132 121 11 0.7630379 416 13 0.751583 166 8 0.435714 49 3 0.6741925 288 14 0.652047 344 13 0.637746 317 13 0.771338 432 13 0.7515908 228 12 0.6890252 145 14 0.706852 456 11 0.7042125 60 6 0.5268055 220 14 0.6564336 246 10 0.6992686 232 12 0.746366 352 13 0.7164048 300 13 0.6402250 206 11 0.768107 365 13 0.8328939 0.7371445 0.7217338 0.8434063 0.7960953 0.8138505 0.7852364 0.8037322 0.8548261 0.8598383 0.804309 0.683004 0.8744884 0.7896524 0.8892082 0.7515074 0.8430909 0.8014973 0.832406 0.810186 0.8232104 0.7841755 0.802531 0.8050499 0.8137786 0.8215373 0.8324286 0.660432 0.80410977 0.8128346 0.7957515 0.8386431 0.7757107 0.7995220 0.714139 0.8390269 0.747250 0.8158556 0.8467157 0.8238700 0.8031049 0.8183765 0.835146 4 0.812930 0.8103698 0.00477583 12 0.719810 0.660337 0.05947295 0.1249592 8.8664e-01 insignificant 1.00000 1.000000 insignificant 0.0797381 0.98095283 insignificant 1 1.00000 insignificant 0.04859794 0.167642 insignificant 1 insignificant 0.8128492 0.7540620 0.05114072 12 0.707628 0.6088357 0.0987925 7.0592e-09 9.8202e-01 weaklyHypermeth 1.1030e-07 1.0000e+00 weaklyHypermeth 1.3432e-03 9.3388e-01 weaklyHypermeth 1.9189e-02 1.0000e+00 weaklyHypermeth 0.0687210 9.3473e-02 insignificant 8.8966e-01 insignificant 0.8136031 0.792440 -7.7175e-03 12 0.735464 0.672829 0.0626346 5.7847e-01 4.6167e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.1966e-01 5.1983e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.02713319 0.35847328 insignificant 1.000000 insignificant 0.8103011 0.7540620 0.04729867 13 0.645569 0.6088357 0.03673378 4.2113e-02 9.1312e-01 weaklyHypermeth 2.6995e-01 1.0000e+00 insignificant 3.1595e-01 7.4209e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.0123e-02 6.4713e-01 insignificant 1.0000e+00 insignificant 0.8118416 0.792440 -0.01071757 13 0.720368 0.672829 0.0475386 8.2270e-01 2.3227e-01 insignificant 1.0000e+00 1.000000 insignificant 9.3312e-01 3.1520e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0214648 0.5636002 insignificant 1.00000 insignificant 0.7542561 0.792985 -0.0524843 13 0.5953915 0.704869 -0.10947750 9.6305e-01 3.8587e-03 weaklyHypometh 1.0000e+00 4.0618e-02 weaklyHypometh 9.9543e-01 1.5657e-02 weaklyHypometh 1.0000e+00 1.7592e-01 insignificant -0.0415878 3.1073e-01 insignificant 1.0000e+00 insignificant chr3 187945942 187946942 15155 KNG1 ENSG00000113889 0.657500 107 6 0.4361001 138 6 0.5291667 37 4 0.5746032 108 6 0.609069 95 7 0.4361472 146 7 0.4393939 80 7 0.5000000 123 6 0.405051 50 4 0.4888889 37 6 0.519426 196 6 0.436508 29 3 0.4611111 31 2 0.4625000 44 3 0.2653061 36 6 0.3500000 16 3 NA 0 0 0.4522263 104 6 0.715909 50 6 0.5433150 91 6 0.496429 39 5 0.5000000 24 0 0.4870130 58 6 0.4098639 50 6 0.7184028 76 6 0.5068713 80 6 0.485714 39 6 0.312500 13 0 0.6170635 58 5 0.433250 155 7 0.493970 142 6 0.450340 107 6 0.4722222 110 6 0.4754902 98 7 0.379290 119 7 0.4444444 24 3 0.5035943 100 7 0.4558442 97 6 0.4853336 152 6 0.556391 127 6 0.6127663 118 6 0.5000000 58 3 0.512691 162 6 0.5570909 0.5218948 0.5413636 0.5750649 0.6557041 0.5212810 0.4993113 0.6018182 0.4637190 0.5021212 0.527235 0.450649 0.5200000 0.6127273 0.3137662 0.4694311 NA 0.6024302 0.617355 0.574342 0.5872727 0.4886364 0.577686 0.4769120 0.7803030 0.5831473 0.3812987 0.489220 0.60649351 0.5067834 0.5721166 0.5228139 0.3606061 0.4639037 0.454844 0.4515152 0.515087 0.5332231 0.5031877 0.6478469 0.6214683 0.5224242 0.601733 0 0.520422 0.5398335 -0.01958074 6 0.492990 0.496627 -0.00363733 0.3747309 1.7541e-01 insignificant 1.00000 1.000000 insignificant 0.5596713 0.23825942 insignificant 1 1.00000 insignificant -0.00408014 0.914696 lowCoverage 1 lowCoverage 0.5204216 0.4379562 0.07286357 6 0.492990 0.4749712 0.0180185 3.6898e-03 8.2702e-01 weaklyHypermeth 2.9998e-02 1.0000e+00 weaklyHypermeth 1.3586e-01 9.3521e-01 insignificant 9.2424e-01 1.0000e+00 insignificant 0.0333904 2.7143e-01 insignificant 1.0000e+00 insignificant 0.5200267 0.583468 -5.5352e-02 6 0.455651 0.504513 -0.0488623 9.9966e-01 3.3340e-02 weaklyHypometh 1.0000e+00 7.0936e-01 insignificant 9.9819e-01 1.4550e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.04489844 0.19975782 insignificant 1.000000 insignificant 0.5398335 0.4379562 0.09301521 6 0.496627 0.4749712 0.02165585 8.7488e-03 9.7262e-01 weaklyHypermeth 6.5780e-02 1.0000e+00 weaklyHypermeth 4.1791e-02 9.3302e-01 weaklyHypermeth 3.2396e-01 1.0000e+00 insignificant 3.7471e-02 2.8400e-01 lowCoverage 1.0000e+00 lowCoverage 0.5409639 0.583468 -0.03475451 6 0.470890 0.504513 -0.0336227 9.5256e-01 2.6568e-01 insignificant 1.0000e+00 1.000000 insignificant 6.4080e-01 4.0207e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0408183 0.2901535 lowCoverage 1.00000 lowCoverage 0.4315197 0.583468 -0.1254687 6 0.3892405 0.504513 -0.11527234 9.9998e-01 3.3975e-04 weaklyHypometh 1.0000e+00 5.2270e-03 weaklyHypometh 9.9805e-01 8.1178e-03 weaklyHypometh 1.0000e+00 1.1597e-01 insignificant -0.0782888 2.7181e-02 weaklyHypometh 3.7235e-01 insignificant chr3 188271942 188272942 15178 ENSG00000203632 0.847847 331 9 0.6772857 117 6 0.6035053 149 9 0.7715007 152 9 0.852488 88 6 0.8317784 248 9 0.6618166 111 9 0.8631717 129 7 0.676228 111 9 0.8053143 74 9 0.807818 291 9 0.705556 78 9 0.8547325 133 8 0.9500000 16 3 0.7605742 106 9 0.7870370 52 5 0.839554 88 6 0.8815302 194 9 0.868969 129 9 0.7039534 277 9 0.757143 53 4 0.7847222 78 9 0.6915238 197 9 0.8212121 75 8 0.8090909 84 9 0.8814400 165 9 0.510539 72 5 0.862727 58 4 0.7714171 94 7 0.866282 190 9 0.757936 168 9 0.853949 339 9 0.6191465 88 7 0.6119805 110 9 0.736689 170 9 0.8111111 71 6 0.6683233 106 7 0.8521961 130 8 0.8447307 239 9 0.837117 194 9 0.8774434 298 9 0.8469993 338 6 0.897356 261 9 0.9165662 0.7212944 0.7518888 0.8770708 0.7353480 0.8485039 0.6996604 0.8835184 0.8061748 0.8527663 0.809387 0.745789 0.8830826 0.8665003 0.7735147 0.7900291 0.8362612 0.9194247 0.891356 0.823283 0.7941279 0.8756672 0.803011 0.8840611 0.9844383 0.9086389 0.6692347 0.886919 0.79196570 0.8937343 0.8510613 0.8608286 0.6908734 0.6609010 0.759495 0.8369723 0.855214 0.8399067 0.8945201 0.8749040 0.8590282 0.8712317 0.906879 3 0.825678 0.8499682 -0.02497023 9 0.759319 0.724252 0.03506675 0.9973629 3.1774e-01 insignificant 1.00000 1.000000 insignificant 0.9833754 0.33343880 insignificant 1 1.00000 insignificant 0.00686772 0.849061 insignificant 1 insignificant 0.8256785 0.7496296 0.06950556 9 0.759319 0.7116935 0.0476255 4.4044e-02 7.7178e-01 weaklyHypermeth 2.8053e-01 1.0000e+00 insignificant 2.1043e-01 9.2743e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0709586 1.6119e-01 insignificant 1.0000e+00 insignificant 0.8268625 0.887970 -5.7463e-02 9 0.811080 0.874145 -0.0630656 9.9984e-01 4.6612e-03 weaklyHypometh 1.0000e+00 2.4532e-01 insignificant 9.9375e-01 6.1144e-02 insignificant 1.0000e+00 1.00000000 insignificant -0.07319632 0.00451627 weaklyHypometh 0.196359 insignificant 0.8499682 0.7496296 0.09938775 9 0.724252 0.7116935 0.01255873 1.2612e-02 9.2321e-01 weaklyHypermeth 9.1903e-02 1.0000e+00 weaklyHypermeth 7.6782e-02 9.7505e-01 insignificant 5.4844e-01 1.0000e+00 insignificant 6.4091e-02 2.3230e-01 insignificant 1.0000e+00 insignificant 0.8562176 0.887970 -0.03256424 9 0.837809 0.874145 -0.0363367 9.8685e-01 1.2255e-01 insignificant 1.0000e+00 1.000000 insignificant 8.5928e-01 3.5548e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0800640 0.0239813 weaklyHypometh 0.77774 insignificant 0.7622699 0.887970 -0.1249655 9 0.7819700 0.874145 -0.09217545 9.9722e-01 1.5025e-02 weaklyHypometh 1.0000e+00 1.1831e-01 insignificant 9.5162e-01 1.6270e-02 weaklyHypometh 1.0000e+00 1.8078e-01 insignificant -0.1441549 1.5711e-02 weaklyHypometh 2.5341e-01 insignificant chr3 189444342 189445342 15208 LPP ENSG00000145012 0.869087 196 5 0.8416667 84 5 0.8546667 104 5 0.9309091 106 5 0.807143 46 5 0.8492240 242 5 0.8143386 111 5 0.9395604 77 5 0.826041 97 5 0.8935673 96 5 0.855618 159 5 0.909091 77 5 0.7896140 111 5 NA 0 0 0.8420952 104 5 0.8666667 47 5 0.728054 78 5 0.8355556 51 5 0.768397 77 5 0.8787966 198 5 0.833333 38 4 0.9577778 48 5 0.8143765 145 5 0.7619048 57 5 0.6654545 45 5 0.8304880 96 5 0.883333 57 5 0.866667 24 3 0.8024535 77 5 0.884444 106 5 0.912000 98 5 0.843346 273 5 0.8480000 89 5 0.8906433 64 5 0.886667 52 5 0.7883117 42 5 0.8290598 53 5 0.8211230 131 5 0.8836594 193 5 0.899556 186 5 0.8885000 105 5 0.8967203 155 5 0.878444 108 5 0.8727579 0.8463522 0.8580511 0.9324259 0.8061497 0.8523142 0.8177362 0.9396192 0.8302311 0.8938925 0.852705 0.914925 0.7966301 NA 0.8484492 0.8654189 0.7209527 0.8439691 0.772455 0.881648 0.8382353 0.9599525 0.818045 0.7585943 0.6683277 0.8380419 0.8903743 0.873440 0.80883200 0.8859180 0.9144831 0.8468353 0.8406417 0.8892172 0.890374 0.7857837 0.835322 0.8184392 0.8885357 0.9058824 0.8885428 0.9013705 0.879430 5 0.857351 0.8458647 0.00438250 5 0.850515 0.845671 0.00484363 0.5458861 7.4890e-01 insignificant 1.00000 1.000000 insignificant 0.4160825 0.49868352 insignificant 1 1.00000 insignificant 0.00940834 0.710020 lowCoverage 1 lowCoverage 0.8573508 0.8004640 0.01929977 5 0.850515 0.8407770 0.0097379 1.1739e-01 8.8459e-02 insignificant 6.7857e-01 1.0000e+00 insignificant 5.4617e-01 6.0541e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0034059 8.6938e-01 lowCoverage 1.0000e+00 lowCoverage 0.8573508 0.910308 -4.0091e-02 5 0.850515 0.890949 -0.0404339 9.9833e-01 2.6038e-02 weaklyHypometh 1.0000e+00 6.3506e-01 insignificant 9.8897e-01 1.2124e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.04200267 0.00352826 lowCoverage 0.182485 lowCoverage 0.8458647 0.8004640 0.01559622 5 0.845671 0.8407770 0.00489429 2.4958e-01 1.8539e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.5812e-01 2.2768e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -6.0025e-03 8.2753e-01 lowCoverage 1.0000e+00 lowCoverage 0.8458647 0.910308 -0.04548200 5 0.845671 0.890949 -0.0452775 9.9748e-01 4.4955e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 9.4925e-01 1.2241e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0514110 0.0387415 lowCoverage 1.00000 lowCoverage 0.8004640 0.910308 -0.0633358 5 0.8407770 0.890949 -0.05017180 2.8632e-01 3.6140e-02 weaklyHypometh 1.0000e+00 2.5273e-01 insignificant 2.5176e-01 1.1720e-01 insignificant 1.0000e+00 8.2406e-01 insignificant -0.0454085 3.6977e-02 weaklyHypometh 4.4807e-01 insignificant chr3 190564842 190565842 15247 TPRG1 ENSG00000188001 0.756825 454 11 0.6480203 200 11 0.5120443 142 11 0.8102358 241 11 0.765618 128 11 0.8653442 441 11 0.6031972 202 11 0.7217665 217 11 0.743080 109 7 0.5593036 131 11 0.835828 371 11 0.810768 93 7 0.6906889 219 11 0.8833333 41 5 0.6425832 174 11 0.8426407 67 6 0.684827 140 6 0.8220553 300 11 0.738598 269 11 0.7541000 387 11 0.778066 59 5 0.7494152 128 10 0.7042410 157 11 0.7489899 80 7 0.8313131 153 11 0.7402017 249 11 0.816787 141 11 0.786012 62 6 0.8215872 178 8 0.784823 310 11 0.731205 262 11 0.761042 562 11 0.6379461 206 11 0.6776994 224 11 0.690387 252 11 0.6866945 134 6 0.7077589 123 10 0.5925361 316 11 0.7540484 381 11 0.763736 386 11 0.7818512 265 11 0.7497964 370 11 0.778704 379 11 0.7407784 0.6703606 0.6444546 0.7876151 0.7462501 0.8297161 0.6587061 0.7634154 0.7186297 0.6516526 0.775243 0.784724 0.6980457 0.7958338 0.7278298 0.7824907 0.6455239 0.8136005 0.779540 0.793467 0.8387804 0.7304509 0.731312 0.7354930 0.8506405 0.7243112 0.7966544 0.731744 0.77421953 0.7704912 0.7652981 0.7671716 0.6575920 0.6937583 0.670660 0.7927669 0.706708 0.6850899 0.7652359 0.7686859 0.7574073 0.7955008 0.788114 7 0.755201 0.7669944 -0.00988555 11 0.722829 0.788248 -0.06541815 0.9427776 3.7552e-01 insignificant 1.00000 1.000000 insignificant 0.9930815 0.14922298 insignificant 1 1.00000 insignificant -0.03659733 0.164158 insignificant 1 insignificant 0.7550973 0.7051793 0.04842578 11 0.703739 0.5878891 0.1158497 4.3363e-04 9.9992e-01 weaklyHypermeth 4.1298e-03 1.0000e+00 weaklyHypermeth 2.4357e-03 9.9998e-01 weaklyHypermeth 3.2048e-02 1.0000e+00 weaklyHypermeth 0.0690392 2.5995e-02 weaklyHypermeth 3.6104e-01 insignificant 0.7550973 0.767546 -2.3852e-02 11 0.703739 0.732753 -0.0290145 9.6053e-01 1.2787e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6093e-01 1.6071e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.03108416 0.20603866 insignificant 1.000000 insignificant 0.7665236 0.7051793 0.05714639 11 0.765023 0.5878891 0.17713355 5.8211e-04 9.9999e-01 weaklyHypermeth 5.7635e-03 1.0000e+00 weaklyHypermeth 4.2590e-04 1.0000e+00 weaklyHypermeth 7.2186e-03 1.0000e+00 weaklyHypermeth 1.0564e-01 5.8077e-04 weaklyHypermeth 1.7082e-02 weaklyHypermeth 0.7665236 0.767546 -0.01369367 11 0.765023 0.732753 0.0322693 8.7048e-01 3.4825e-01 insignificant 1.0000e+00 1.000000 insignificant 8.0081e-01 7.1766e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0055132 0.6769784 insignificant 1.00000 insignificant 0.7051793 0.767546 -0.0720955 11 0.5878891 0.732753 -0.14486421 1.0000e+00 2.5439e-04 weaklyHypometh 1.0000e+00 4.1134e-03 weaklyHypometh 1.0000e+00 9.1402e-05 weaklyHypometh 1.0000e+00 2.6115e-03 weaklyHypometh -0.1001234 1.4214e-03 weaklyHypometh 4.4511e-02 weaklyHypometh chr3 191204142 191205142 15288 MIR944 ENSG00000216058 0.781710 360 8 0.7228526 115 8 0.7778860 103 8 0.8128238 147 8 0.697601 70 7 0.8133750 330 8 0.8427258 121 7 0.8174874 113 8 0.738319 96 6 0.8793177 110 7 0.857800 275 8 0.746377 88 7 0.7463807 153 8 NA 0 0 0.8710546 117 8 0.8204518 80 7 0.774351 97 7 0.8650313 222 8 0.847009 160 8 0.7810349 297 8 0.815357 102 8 0.7998980 100 8 0.8069715 218 8 0.9903846 39 3 0.8736111 81 8 0.8072582 119 8 0.853098 76 8 0.629167 78 8 0.8206169 63 4 0.775797 160 8 0.826871 107 7 0.862387 310 8 0.7635802 83 7 0.6613279 124 7 0.767524 147 8 0.8310096 101 7 0.6991236 92 7 0.7032509 130 8 0.8167339 305 8 0.836225 362 8 0.8163920 225 8 0.8280876 298 8 0.907939 249 8 0.8139248 0.8028444 0.8469795 0.8076902 0.7490841 0.8226493 0.8656032 0.8273823 0.7295223 0.8804082 0.901068 0.782726 0.7861107 NA 0.8545425 0.8224488 0.7989933 0.8964629 0.853245 0.854397 0.9010734 0.8107661 0.841581 0.9840939 0.8757815 0.8281292 0.8588730 0.761299 0.83484482 0.7953556 0.8384707 0.8348707 0.7293597 0.7393613 0.721153 0.8052716 0.743200 0.7593945 0.8616053 0.8375163 0.8383286 0.8526152 0.904358 6 0.825475 0.8334480 -0.00741044 8 0.763349 0.803150 -0.03980155 0.9381323 3.5836e-01 insignificant 1.00000 1.000000 insignificant 0.9868743 0.24986170 insignificant 1 1.00000 insignificant -0.02212223 0.418464 insignificant 1 insignificant 0.8254748 0.7415066 0.08126450 7 0.763349 0.7747626 -0.0114137 1.6274e-06 9.7157e-01 weaklyHypermeth 2.0342e-05 1.0000e+00 weaklyHypermeth 6.0390e-04 9.9381e-01 weaklyHypermeth 9.4360e-03 1.0000e+00 weaklyHypermeth 0.0620266 5.8525e-02 insignificant 6.3614e-01 insignificant 0.8267017 0.851981 -2.7933e-02 8 0.811329 0.837806 -0.0264775 9.8430e-01 3.1932e-02 weaklyHypometh 1.0000e+00 6.9416e-01 insignificant 9.8382e-01 4.1498e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant -0.04141291 0.08233081 insignificant 1.000000 insignificant 0.8334480 0.7415066 0.08591018 7 0.803150 0.7747626 0.02838783 8.3306e-06 9.9976e-01 weaklyHypermeth 1.1107e-04 1.0000e+00 weaklyHypermeth 3.3002e-04 9.9988e-01 weaklyHypermeth 5.6900e-03 1.0000e+00 weaklyHypermeth 8.4149e-02 2.9364e-02 weaklyHypermeth 3.6705e-01 insignificant 0.8339100 0.851981 -0.02207478 8 0.816438 0.837806 -0.0213684 9.6124e-01 2.0929e-01 insignificant 1.0000e+00 1.000000 insignificant 9.2579e-01 5.9271e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0192907 0.5193337 insignificant 1.00000 insignificant 0.7403561 0.851981 -0.1088517 7 0.7184532 0.837806 -0.11935317 1.0000e+00 3.2231e-07 weaklyHypometh 1.0000e+00 8.7110e-06 weaklyHypometh 1.0000e+00 4.4129e-05 weaklyHypometh 1.0000e+00 1.4235e-03 weaklyHypometh -0.1034395 8.4577e-03 weaklyHypometh 1.5958e-01 insignificant chr3 191872342 191873342 15317 ENSG00000214148 0.561752 295 8 0.4945040 202 9 0.4665238 170 9 0.6250524 280 8 0.583911 128 8 0.5476684 256 9 0.5509993 177 7 0.5800689 166 9 0.516465 127 8 0.5517480 145 6 0.610659 293 9 0.561458 123 6 0.5089622 205 9 0.5622896 93 8 0.6757136 165 8 0.5998051 113 9 0.515756 151 6 0.6255211 281 8 0.541543 188 9 0.6010539 202 8 0.708730 66 6 0.5024335 87 6 0.5549478 174 7 0.7133601 72 8 0.5526455 58 7 0.5749975 300 9 0.522308 64 3 0.620655 76 8 0.4312610 126 8 0.623050 287 9 0.568221 277 9 0.597017 301 8 0.5069072 174 9 0.4949994 149 9 0.547343 135 7 0.5416667 25 2 0.4823272 165 9 0.4952757 210 9 0.4594045 239 9 0.571353 235 7 0.5109696 222 6 0.5870742 190 6 0.551039 220 9 0.5695651 0.5480635 0.5220526 0.5994787 0.5715721 0.5654793 0.5359772 0.5663719 0.5489744 0.5960233 0.605146 0.570859 0.5891297 0.5915724 0.6182259 0.6023486 0.5309674 0.5414377 0.540927 0.589253 0.6662730 0.5706593 0.568069 0.6550551 0.6114631 0.5685337 0.5208437 0.643445 0.49474526 0.5981840 0.5749190 0.5816754 0.5102562 0.4622050 0.578436 0.6609706 0.536523 0.5433911 0.5794101 0.5667600 0.5340582 0.5950555 0.577616 4 0.531915 0.5778602 -0.00774973 9 0.584090 0.603203 -0.01911269 0.3563814 3.6691e-01 insignificant 1.00000 1.000000 insignificant 0.2980766 0.53101560 insignificant 1 1.00000 insignificant -0.01672936 0.526079 insignificant 1 insignificant 0.5313083 0.5093240 0.05234529 9 0.556785 0.5439781 0.0128067 1.4175e-03 6.5292e-01 weaklyHypermeth 1.2434e-02 1.0000e+00 weaklyHypermeth 1.9655e-02 4.3354e-01 weaklyHypermeth 1.8199e-01 1.0000e+00 insignificant 0.0526530 3.9953e-03 weaklyHypermeth 8.1136e-02 weaklyHypermeth 0.5319149 0.486438 4.3955e-03 9 0.584090 0.566565 0.0175248 3.0917e-01 7.1993e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.7872e-01 4.9093e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.02810472 0.31419461 insignificant 1.000000 insignificant 0.5769639 0.5093240 0.06618823 9 0.563523 0.5439781 0.01954495 1.0940e-02 3.5882e-01 weaklyHypermeth 8.0444e-02 1.0000e+00 weaklyHypermeth 4.4070e-01 3.4069e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.9382e-02 1.6504e-02 weaklyHypermeth 2.5006e-01 insignificant 0.5778602 0.486438 0.01673771 9 0.603203 0.566565 0.0366375 3.6707e-01 6.0518e-01 insignificant 1.0000e+00 1.000000 insignificant 5.9927e-01 5.7740e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0448341 0.1955224 insignificant 1.00000 insignificant 0.5093240 0.484574 -0.0506468 9 0.5439781 0.523222 0.02075629 3.9196e-01 1.1622e-01 insignificant 1.0000e+00 7.0012e-01 insignificant 1.7461e-01 3.1775e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0245483 3.7377e-01 insignificant 1.0000e+00 insignificant chr3 194084742 194085742 15373 ENSG00000200184 0.809692 322 7 0.7470330 147 8 0.5452182 133 10 0.6886842 157 10 0.726263 58 7 0.7482254 337 10 0.7892191 100 10 0.7144505 111 7 0.645476 84 7 0.6848707 84 6 0.661341 264 10 0.678352 58 7 0.8031082 120 9 0.8294118 41 2 0.6889414 110 7 0.6989987 70 6 0.687437 61 6 0.8243440 197 10 0.787833 147 7 0.7600736 265 10 0.835606 65 4 0.8307540 91 8 0.6676867 129 7 0.8349206 67 6 0.7368254 76 9 0.6602994 214 10 0.784960 82 5 0.607143 41 4 0.7656717 106 7 0.784879 204 10 0.815594 120 8 0.746537 357 10 0.8136119 107 8 0.6449072 101 7 0.671154 166 10 0.7812157 49 4 0.7785574 92 6 0.7299696 191 10 0.7043829 295 10 0.724272 233 10 0.7733880 194 10 0.8181712 240 7 0.752531 255 10 0.8161785 0.7878700 0.6262344 0.7631525 0.7922923 0.8212827 0.8580648 0.8101995 0.7229730 0.7962446 0.817086 0.704778 0.8365398 0.8186920 0.8278265 0.7922809 0.8143725 0.8279743 0.826165 0.816432 0.8543168 0.8009885 0.758870 0.8650436 0.7767196 0.7721935 0.8293190 0.710099 0.82312537 0.8668349 0.8525342 0.8004163 0.8401225 0.7178755 0.765079 0.7777453 0.746442 0.7886552 0.8053842 0.8047132 0.7960634 0.8508671 0.860374 4 0.773124 0.7847938 -0.01356185 10 0.737144 0.749406 -0.01226238 0.9829739 3.8104e-01 insignificant 1.00000 1.000000 insignificant 0.9823449 0.22161949 insignificant 1 1.00000 insignificant -0.02995791 0.279231 insignificant 1 insignificant 0.7732031 0.7422096 0.03461262 10 0.757363 0.7287558 0.0286076 9.9950e-02 8.7722e-01 insignificant 5.9494e-01 1.0000e+00 insignificant 1.6554e-01 7.2989e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0106208 7.4483e-01 insignificant 1.0000e+00 insignificant 0.7730447 0.814297 -3.1071e-02 10 0.713248 0.770218 -0.0569706 8.4235e-01 8.7281e-03 weaklyHypometh 1.0000e+00 3.0097e-01 insignificant 9.2386e-01 1.5014e-02 weaklyHypometh 1.0000e+00 0.55607563 insignificant -0.02860050 0.28615105 insignificant 1.000000 insignificant 0.7847938 0.7418440 0.04936258 10 0.749406 0.7061521 0.04325393 9.3483e-03 9.6725e-01 weaklyHypermeth 6.9764e-02 1.0000e+00 weaklyHypermeth 3.2673e-02 9.3123e-01 weaklyHypermeth 2.6781e-01 1.0000e+00 insignificant 1.9337e-02 5.9132e-01 insignificant 1.0000e+00 insignificant 0.7843770 0.814297 -0.00655694 10 0.726625 0.770218 -0.0435935 7.1598e-01 2.5018e-01 insignificant 1.0000e+00 1.000000 insignificant 5.8920e-01 5.0858e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0013574 0.9639971 insignificant 1.00000 insignificant 0.7425320 0.814297 -0.0563065 10 0.7248932 0.770218 -0.04532506 8.8983e-01 3.9360e-03 weaklyHypometh 1.0000e+00 4.0928e-02 weaklyHypometh 9.2936e-01 1.7943e-02 weaklyHypometh 1.0000e+00 1.9504e-01 insignificant -0.0179797 6.0766e-01 insignificant 1.0000e+00 insignificant chr3 195097642 195098642 15407 ENSG00000208326 0.808696 114 5 0.7128571 25 3 0.8111111 31 4 0.7716667 55 5 0.350000 11 0 0.9063471 97 5 1.0000000 24 2 0.5331197 47 5 0.692381 52 5 0.8717382 57 5 0.782531 86 5 0.500000 10 0 0.5514621 106 5 0.8666667 30 5 0.8047619 39 5 0.8000000 7 0 0.400000 14 1 0.5375032 80 5 0.706667 19 2 0.5898514 90 6 0.838095 37 5 0.0892094 94 5 0.6616947 52 5 0.3666667 21 1 0.6545455 58 5 0.4702564 72 5 0.616468 43 5 0.763889 16 0 0.5347222 35 4 0.635824 73 5 0.600275 66 5 0.814654 104 5 0.6900641 58 5 0.6266667 27 4 0.333333 60 3 0.5000000 6 0 0.7864286 41 5 0.6728571 53 5 0.0533333 50 5 0.439033 45 5 0.0776190 53 5 0.1083333 38 5 0.240000 35 5 0.7716171 0.7152291 0.8218029 0.7727987 0.5050672 0.9055983 1.0000000 0.6381229 0.6949686 0.8763029 0.784003 0.603774 0.5488498 0.8679245 0.8084007 0.7924528 0.4150943 0.5345899 0.710692 0.637441 0.8378257 0.1037909 0.663773 0.3952830 0.6556604 0.4740065 0.7433064 0.775157 0.64544025 0.6352892 0.7286440 0.7760439 0.8239478 0.6257862 0.520350 0.5849057 0.787803 0.6677898 0.0503145 0.3325982 0.0779425 0.1092767 0.236478 0 0.711268 0.5871833 0.12756296 5 0.641998 0.550669 0.09132894 0.0027003 9.9597e-01 weaklyHypermeth 0.67508 1.000000 insignificant 0.0302607 0.99734796 weaklyHypermeth 1 1.00000 insignificant 0.11267632 0.130976 lowCoverage 1 lowCoverage 0.7112676 0.6244898 0.08778808 4 0.641998 0.5601952 0.0818032 1.3648e-02 1.6089e-01 lowCoverage 9.6113e-02 1.0000e+00 lowCoverage 4.0748e-02 2.4091e-01 lowCoverage 3.4532e-01 1.0000e+00 lowCoverage 0.0983097 2.3219e-01 lowCoverage 1.0000e+00 lowCoverage 0.7112676 0.158371 5.5582e-01 5 0.641998 0.296791 0.3452071 4.0939e-23 9.0678e-01 hypermethylated 2.0470e-20 1.0000e+00 hypermethylated 2.2374e-09 9.9025e-01 hypermethylated 9.3287e-07 1.00000000 hypermethylated 0.51620422 0.00048348 lowCoverage 0.080581 lowCoverage 0.5871833 0.6244898 -0.02033470 4 0.550669 0.5601952 -0.00952578 2.5464e-01 1.4413e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 2.3263e-01 2.0680e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -1.4367e-02 8.7422e-01 lowCoverage 1.0000e+00 lowCoverage 0.5871833 0.158371 0.42517537 5 0.550669 0.296791 0.2538782 2.8671e-09 9.3489e-01 hypermethylated 3.1857e-07 1.000000 hypermethylated 1.3618e-06 9.7659e-01 hypermethylated 3.4045e-04 1.000000 hypermethylated 0.4035279 0.0015628 lowCoverage 0.39854 lowCoverage 0.6244898 0.158371 0.4865592 4 0.5601952 0.296791 0.26340398 5.2088e-10 1.0000e+00 lowCoverage 8.6813e-08 1.0000e+00 lowCoverage 1.3865e-04 9.9312e-01 lowCoverage 2.7013e-02 1.0000e+00 lowCoverage 0.4178945 2.1723e-03 lowCoverage 6.3890e-02 lowCoverage chr3 195257842 195258842 15422 ENSG00000214146 0.264978 666 14 0.1837426 568 15 0.1953708 385 15 0.2342229 449 14 0.282724 455 16 0.3132314 624 15 0.2305543 607 15 0.2450407 429 15 0.192836 472 15 0.2560241 360 15 0.279974 614 15 0.310451 461 15 0.1873586 347 16 0.3856255 93 8 0.2139618 470 15 0.2346903 386 15 0.127101 551 9 0.2062682 685 12 0.235371 340 15 0.1927043 545 15 0.172492 168 15 0.2291667 61 5 0.2060173 467 16 0.2126072 296 15 0.2370287 192 8 0.1986575 728 15 0.234104 292 15 0.234971 189 15 0.2200468 274 15 0.172149 677 15 0.264258 604 15 0.218080 553 15 0.3148353 374 15 0.3982286 425 15 0.303795 455 15 0.3644444 73 6 0.2986218 333 15 0.3307444 479 15 0.2152947 593 14 0.242031 670 15 0.2612585 621 12 0.2418176 478 14 0.204582 519 12 0.2263853 0.2105788 0.2308341 0.2229836 0.2518192 0.2730646 0.1724604 0.2343939 0.2286123 0.2349415 0.255017 0.222674 0.2140096 0.2625934 0.2594498 0.2111612 0.3114972 0.2440430 0.244458 0.225198 0.2095342 0.2725892 0.241720 0.2413842 0.2289523 0.2308592 0.2196797 0.313001 0.24914320 0.2119628 0.2579858 0.2405005 0.4087845 0.4236383 0.408503 0.4227487 0.375378 0.3378338 0.2865809 0.2514187 0.2545251 0.2597708 0.283303 11 0.243517 0.2168407 -0.00053253 15 0.278755 0.217106 0.06164967 0.0438515 4.5561e-01 inconclusive 1.00000 1.000000 insignificant 0.0956107 0.68369953 insignificant 1 1.00000 insignificant 0.02197998 0.153972 insignificant 1 insignificant 0.2434627 0.3562412 -0.11994643 15 0.252727 0.3185504 -0.0658238 4.5345e-01 9.7071e-18 weaklyHypometh 1.0000e+00 1.9414e-15 weaklyHypometh 7.3615e-01 4.5125e-08 weaklyHypometh 1.0000e+00 1.1281e-05 weaklyHypometh -0.0965001 4.6672e-04 weaklyHypometh 1.5055e-02 weaklyHypometh 0.2441053 0.424158 -2.1848e-02 14 0.313432 0.193592 0.1198398 2.4913e-01 2.2852e-02 weaklyHypometh 1.0000e+00 5.8493e-01 insignificant 4.9132e-01 1.6000e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.00561468 0.73644942 insignificant 1.000000 insignificant 0.2167630 0.3562412 -0.13961174 15 0.213236 0.3185504 -0.10531459 9.4451e-01 5.4718e-14 weaklyHypometh 1.0000e+00 1.0944e-11 weaklyHypometh 9.9575e-01 5.7552e-08 weaklyHypometh 1.0000e+00 1.1510e-05 weaklyHypometh -1.1848e-01 2.1034e-04 weaklyHypometh 7.0112e-03 weaklyHypometh 0.2168407 0.424453 -0.02651806 14 0.217106 0.213970 0.0031357 9.3133e-01 1.7052e-01 insignificant 1.0000e+00 1.000000 insignificant 9.7929e-01 2.3231e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0163653 0.2332680 insignificant 1.00000 insignificant 0.3562412 0.424748 0.1270274 14 0.3185504 0.239143 0.07940739 5.4667e-06 9.8857e-01 weaklyHypermeth 6.0741e-04 1.0000e+00 weaklyHypermeth 6.0815e-04 9.9906e-01 weaklyHypermeth 7.6019e-02 1.0000e+00 weaklyHypermeth 0.1021148 5.8551e-04 weaklyHypermeth 2.7881e-02 weaklyHypermeth chr3 195270642 195271642 15423 ENSG00000214146 0.163572 243 25 0.1672380 333 17 0.0907523 435 26 0.2113527 153 8 0.144871 536 31 0.1789618 326 25 0.0918591 515 26 0.1651830 378 31 0.137942 433 28 0.1604366 427 29 0.143890 495 31 0.060105 568 30 0.1094577 382 25 0.0510285 79 12 0.0995362 474 30 0.1407401 540 27 0.060857 292 17 0.2409421 250 16 0.134906 425 27 0.1984177 227 13 0.112795 159 18 0.1325218 130 11 0.1966473 296 26 0.1237814 198 14 0.0578231 102 4 0.1814143 696 33 0.092322 286 22 0.108273 307 24 0.1458121 320 27 0.168435 603 31 0.144639 485 30 0.246094 264 18 0.1377789 407 28 0.1955691 451 24 0.253955 328 10 0.1190476 92 3 0.2267080 267 21 0.0998464 354 22 0.1717314 273 18 0.227054 246 20 0.2377451 186 15 0.1877962 212 12 0.144531 217 17 0.0946782 0.0817170 0.0776976 0.1152498 0.1084010 0.1125472 0.0962371 0.0894727 0.0644515 0.0869197 0.099505 0.084794 0.0678463 0.1217283 0.0912348 0.1051516 0.0758170 0.1166300 0.065693 0.137348 0.1054208 0.0931303 0.119078 0.1253361 0.0903390 0.0687349 0.0816526 0.108064 0.09839039 0.0833605 0.0606272 0.1475310 0.0836681 0.0881985 0.199113 0.0904445 0.090266 0.0755536 0.0933022 0.1416475 0.0772543 0.0958083 0.119681 3 0.112102 0.1264966 -0.00183554 28 0.186759 0.195730 -0.00897129 0.8605410 7.1006e-01 insignificant 1.00000 1.000000 insignificant 0.9881004 0.81634048 insignificant 1 1.00000 insignificant -0.00494404 0.792456 insignificant 1 insignificant 0.1118807 0.1837809 -0.01297968 28 0.175333 0.2159879 -0.0406551 9.3931e-01 8.5995e-05 weaklyHypometh 1.0000e+00 1.2270e-02 weaklyHypometh 9.9118e-01 1.4715e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0345485 2.5525e-01 insignificant 1.0000e+00 insignificant 0.1122656 0.175640 -7.6791e-03 10 0.193058 0.199943 -0.0068849 8.0938e-01 4.0726e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.5500e-01 7.9713e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.05616908 0.02697533 weaklyHypometh 0.528928 insignificant 0.1265955 0.1837809 -0.01148573 28 0.200391 0.2159879 -0.01559717 9.9937e-01 1.5128e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9869e-01 7.9023e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -2.9604e-02 3.4111e-01 insignificant 1.0000e+00 insignificant 0.1249670 0.175640 -0.00935347 10 0.180173 0.199943 -0.0197697 9.9685e-01 9.0843e-01 insignificant 1.0000e+00 1.000000 insignificant 9.9207e-01 9.7331e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0512250 0.0473410 weaklyHypometh 1.00000 insignificant 0.1814301 0.176106 -0.0059425 10 0.1879427 0.205497 -0.01755423 3.3804e-01 9.7867e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.5444e-01 9.8961e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0216206 5.0137e-01 insignificant 1.0000e+00 insignificant chr3 195270742 195271742 15424 ENSG00000214146 0.063748 540 31 0.0750053 618 24 0.0559899 793 35 0.0818118 508 10 0.046244 616 34 0.1048739 653 28 0.0412684 671 29 0.0461061 530 31 0.017244 698 31 0.0316886 692 32 0.020129 570 31 0.015563 758 33 0.0028398 583 28 0.0389115 211 17 0.0394577 777 33 0.0166800 728 31 0.000000 423 20 0.1033787 605 18 0.000000 433 27 0.1255993 475 17 0.017241 173 20 0.0526030 262 16 0.1097428 610 35 0.0745635 255 17 0.0119507 213 9 0.0672722 1093 39 0.043931 356 25 0.053713 325 27 0.0231269 387 30 0.055442 959 37 0.037395 773 39 0.126975 530 26 0.0313379 633 37 0.0780767 479 27 0.140659 266 14 0.0430108 152 8 0.1225413 273 23 0.0539286 588 31 0.0569640 550 19 0.097868 491 20 0.0859437 626 19 0.0623783 614 22 0.026919 551 21 0.0195636 0.0220972 0.0111250 0.0270874 0.0294861 0.0309977 0.0228120 0.0146973 0.0041569 0.0132649 0.029382 0.021098 0.0049884 0.0361484 0.0137389 0.0248825 0.0126079 0.0263628 0.000000 0.043048 0.0277438 0.0139128 0.036980 0.0359609 0.0246157 0.0051965 0.0139326 0.033174 0.02249668 0.0172713 0.0061083 0.0442163 0.0106447 0.0126419 0.070061 0.0124899 0.017763 0.0072847 0.0188651 0.0443374 0.0069066 0.0228646 0.029740 8 0.021124 0.0359069 -0.00188735 31 0.092549 0.096568 -0.00401958 0.9061492 9.4305e-01 insignificant 1.00000 1.000000 insignificant 0.9807494 0.98979723 insignificant 1 1.00000 insignificant -0.00983599 0.455798 insignificant 1 insignificant 0.0209614 0.0372229 -0.00219892 31 0.080588 0.1050467 -0.0244588 5.3272e-01 1.5393e-02 weaklyHypometh 1.0000e+00 7.2720e-01 insignificant 7.3731e-01 6.9533e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0319320 1.5187e-01 insignificant 1.0000e+00 insignificant 0.0204549 0.020841 -4.9358e-04 14 0.084823 0.078283 0.0065399 7.4638e-01 8.4043e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3781e-01 9.8340e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.01968773 0.21968780 insignificant 1.000000 insignificant 0.0359251 0.0372229 0.00163867 37 0.098580 0.1050467 -0.00646662 9.9096e-01 8.4854e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7848e-01 9.9578e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -2.2096e-02 3.1771e-01 insignificant 1.0000e+00 insignificant 0.0340426 0.020841 -0.00266491 14 0.069345 0.078283 -0.0089378 9.9931e-01 9.9411e-01 insignificant 1.0000e+00 1.000000 insignificant 9.9922e-01 9.9917e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0098517 0.5504874 insignificant 1.00000 insignificant 0.0338123 0.020863 -0.0089698 14 0.0651592 0.080147 -0.01498767 9.3925e-01 8.3591e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9909e-01 9.6361e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0122443 5.9134e-01 insignificant 1.0000e+00 insignificant chr3 195413042 195414042 15442 ENSG00000208323 0.069690 331 6 0.0388914 339 6 0.0588256 173 6 0.0753805 326 6 0.059314 140 6 0.0722077 513 6 0.0700126 200 6 0.0250561 229 6 0.014921 255 6 0.1122685 135 6 0.142283 206 6 0.115741 80 6 0.0488219 177 6 0.0937500 32 2 0.0280303 192 6 0.0256410 87 6 0.031250 113 4 0.0746812 310 6 0.029775 244 6 0.0269726 578 6 0.039530 69 3 0.0151515 141 4 0.0400817 201 6 0.0708312 138 6 0.0370370 80 6 0.0230622 440 6 0.043104 164 6 0.078105 72 6 0.0523928 263 6 0.012994 384 6 0.013422 475 6 0.134722 421 6 0.3390257 222 6 0.2920875 123 6 0.400000 188 3 0.1423611 35 4 0.3670455 93 6 0.4340839 361 6 0.0247408 473 6 0.081281 332 6 0.0661548 246 6 0.0360097 235 6 0.095855 289 6 0.0642214 0.0353738 0.0560704 0.0737275 0.0548512 0.0657587 0.0640004 0.0254863 0.0136447 0.1034924 0.136777 0.106796 0.0481293 0.0470118 0.0279641 0.0229027 0.0573967 0.0769293 0.026942 0.026002 0.0368434 0.0421183 0.043223 0.0748315 0.0345200 0.0213680 0.0395862 0.071178 0.05091774 0.0121104 0.0123080 0.1278531 0.3400431 0.2695891 0.379962 0.3773154 0.364774 0.4513901 0.0225607 0.0789589 0.0655064 0.0327362 0.096912 6 0.063734 0.0582865 0.00818563 6 0.053955 0.048359 0.00559575 0.4611666 6.9547e-01 insignificant 1.00000 1.000000 insignificant 0.0767834 0.91952787 insignificant 1 1.00000 insignificant 0.01397292 0.284422 insignificant 1 insignificant 0.0637339 0.4158513 -0.35673246 6 0.053955 0.3638837 -0.3099291 9.1163e-01 4.7784e-29 hypomethylated 1.0000e+00 1.5928e-26 hypomethylated 9.7901e-01 1.8237e-07 hypomethylated 1.0000e+00 3.6473e-05 hypomethylated -0.2684250 1.2191e-03 weaklyHypometh 3.0478e-02 weaklyHypometh 0.0637339 0.068571 -2.9176e-03 6 0.053955 0.060257 -0.0063027 6.8130e-01 1.0652e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.0224e-01 1.5621e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.00013260 0.99342420 insignificant 1.000000 insignificant 0.0582865 0.4158513 -0.36349604 6 0.048359 0.3638837 -0.31552488 9.3918e-01 2.0959e-21 hypomethylated 1.0000e+00 6.9862e-19 hypomethylated 9.9907e-01 3.4336e-08 hypomethylated 1.0000e+00 1.1398e-05 hypomethylated -2.8240e-01 8.5656e-04 hypomethylated 2.3150e-02 hypomethylated 0.0582865 0.068571 -0.01020512 6 0.048359 0.060257 -0.0118985 8.1632e-01 9.6013e-02 insignificant 1.0000e+00 1.000000 insignificant 9.7487e-01 4.3220e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.0141055 0.4222271 insignificant 1.00000 insignificant 0.4158513 0.068571 0.3524639 6 0.3638837 0.060257 0.30362639 6.7385e-11 9.1394e-01 hypermethylated 2.2402e-08 1.0000e+00 hypermethylated 1.6208e-04 9.7135e-01 hypermethylated 2.7013e-02 1.0000e+00 hypermethylated 0.2682924 9.4622e-04 hypermethylated 3.7880e-02 hypermethylated chr3 195476742 195477742 15453 ENSG00000208323 0.707247 127 5 0.6091667 90 3 0.7886040 74 5 0.8349309 155 5 0.800000 21 3 0.8751129 182 5 0.7428571 42 5 0.9056277 73 3 0.346154 76 3 0.5538462 64 3 0.747634 167 5 0.484848 23 2 0.5888773 141 3 0.8482895 59 3 0.7615445 85 3 NA 0 0 0.444444 8 0 0.5064357 210 5 0.613852 89 3 0.7190731 113 5 0.623077 28 3 0.3227513 69 3 0.8282540 60 3 0.8644689 57 5 0.7805769 46 3 0.7661258 122 5 0.595674 63 3 0.707857 41 5 0.8672396 104 3 0.729674 159 5 0.671429 144 5 0.870000 118 5 0.1023343 135 5 0.0933277 92 3 0.000000 63 5 0.0476190 11 1 0.0725325 145 5 0.0873593 164 5 0.5527154 178 5 0.631004 137 5 0.6486881 156 5 0.6135498 109 3 0.293817 168 5 0.6910351 0.4320913 0.6943975 0.8041585 0.6634615 0.8459246 0.6380495 0.8455711 0.5761834 0.7378698 0.701117 0.482517 0.5834449 0.7479631 0.5975637 NA 0.4423077 0.4551840 0.693935 0.614845 0.8705621 0.3093712 0.713614 0.7756762 0.6338850 0.7166453 0.5243287 0.736538 0.78022201 0.6698388 0.6171016 0.8778846 0.1546362 0.1393199 0.000000 0.0480769 0.069705 0.0636447 0.4212727 0.4836319 0.5197386 0.5127685 0.304524 3 0.705392 0.7287129 -0.01913750 5 0.722329 0.740105 -0.01777598 0.8993461 4.6567e-01 insignificant 1.00000 1.000000 insignificant 0.9156708 0.27896115 insignificant 1 1.00000 insignificant -0.04110911 0.484767 lowCoverage 1 lowCoverage 0.7053919 0.0901639 0.61001538 5 0.722329 0.0883042 0.6340248 7.6849e-35 1.0000e+00 hypermethylated 4.0447e-33 1.0000e+00 hypermethylated 3.5224e-11 1.0000e+00 hypermethylated 1.7612e-09 1.0000e+00 hypermethylated 0.6106227 1.9361e-13 lowCoverage 6.3626e-11 lowCoverage 0.7053919 0.505348 2.0876e-01 5 0.722329 0.527166 0.1951631 1.4866e-06 9.9999e-01 hypermethylated 9.2912e-05 1.0000e+00 hypermethylated 2.6513e-04 9.9993e-01 hypermethylated 1.8938e-02 1.00000000 hypermethylated 0.12986340 0.12880762 lowCoverage 1.000000 lowCoverage 0.7287129 0.0901639 0.63484130 5 0.740105 0.0883042 0.65180083 6.3491e-30 1.0000e+00 hypermethylated 3.7347e-28 1.0000e+00 hypermethylated 2.8517e-11 1.0000e+00 hypermethylated 1.7823e-09 1.0000e+00 hypermethylated 6.5173e-01 3.0706e-09 lowCoverage 6.1413e-07 lowCoverage 0.7287129 0.505348 0.22986176 5 0.740105 0.527166 0.2129391 3.6902e-06 9.9999e-01 hypermethylated 2.1707e-04 1.000000 hypermethylated 2.0496e-04 9.9997e-01 hypermethylated 1.5766e-02 1.000000 hypermethylated 0.1709725 0.0637475 lowCoverage 1.00000 lowCoverage 0.0901639 0.505348 -0.4068537 5 0.0883042 0.527166 -0.43886176 1.0000e+00 1.0718e-15 hypomethylated 1.0000e+00 5.6411e-14 hypomethylated 1.0000e+00 1.3392e-07 hypomethylated 1.0000e+00 8.3701e-06 hypomethylated -0.4807593 1.3471e-03 lowCoverage 4.4511e-02 lowCoverage chr3 195494642 195495642 15455 ENSG00000208323 0.177748 138 5 0.2089497 298 5 0.2280392 100 5 0.2897859 127 5 0.142684 99 5 0.2260201 384 5 0.2602003 164 5 0.2356035 173 5 0.213382 169 5 0.1879004 114 5 0.369872 184 5 0.412471 54 5 0.0863949 181 5 0.3092250 85 5 0.1391190 138 5 0.1857143 28 3 0.188889 12 2 0.3553391 104 5 0.087157 94 5 0.0416626 323 5 0.561830 51 4 0.0500000 87 3 0.2937323 157 5 0.1730226 135 5 0.3076923 31 2 0.1148481 357 5 0.168544 149 5 0.295827 66 3 0.1508009 123 5 0.144313 372 5 0.063576 356 5 0.404006 294 5 0.8652632 158 5 0.6374848 98 5 0.990000 106 3 0.5000000 22 2 0.9008374 106 5 0.7833114 232 5 0.0255627 263 5 0.127252 167 5 0.0299145 70 5 0.1357576 65 5 0.048182 99 5 0.1904335 0.2444578 0.2606943 0.2161390 0.1698574 0.2410140 0.2787459 0.2505869 0.2793920 0.1896209 0.401264 0.474644 0.0887478 0.3382743 0.1517145 0.2126458 0.2796539 0.4039171 0.094060 0.046299 0.6668734 0.1570465 0.326789 0.2107649 0.3359498 0.1488988 0.1829700 0.381031 0.17376127 0.1566651 0.0862412 0.4477985 0.8778733 0.6649814 0.880009 0.6049652 0.893719 0.8122814 0.0308296 0.1424165 0.0354308 0.1341218 0.052087 4 0.216717 0.2121212 0.01397300 5 0.337030 0.156784 0.18024577 0.5614439 9.2903e-01 insignificant 1.00000 1.000000 insignificant 0.5727098 0.79635693 insignificant 1 1.00000 insignificant -0.01004160 0.838469 lowCoverage 1 lowCoverage 0.2167172 0.8601108 -0.61151915 5 0.337030 0.8312996 -0.4942696 1.0000e+00 5.5778e-37 hypomethylated 1.0000e+00 2.7889e-34 hypomethylated 1.0000e+00 2.0918e-09 hypomethylated 1.0000e+00 6.9726e-07 hypomethylated -0.5621749 3.7523e-04 lowCoverage 1.2508e-02 lowCoverage 0.2164531 0.075301 1.5691e-01 5 0.204436 0.066662 0.1377745 3.8834e-06 1.0000e+00 weaklyHypermeth 2.0439e-04 1.0000e+00 weaklyHypermeth 1.0856e-06 9.9999e-01 weaklyHypermeth 1.2442e-04 1.00000000 weaklyHypermeth 0.14397405 0.00088619 lowCoverage 0.110773 lowCoverage 0.2121212 0.8601108 -0.63677879 5 0.156784 0.8312996 -0.67451535 1.0000e+00 1.1824e-24 hypomethylated 1.0000e+00 5.9121e-22 hypomethylated 1.0000e+00 4.5591e-08 hypomethylated 1.0000e+00 1.1398e-05 hypomethylated -5.5213e-01 1.5070e-04 lowCoverage 5.5816e-03 lowCoverage 0.2124138 0.075301 0.14116076 5 0.188141 0.066662 0.1214796 6.3936e-04 9.9992e-01 weaklyHypermeth 2.2047e-02 1.000000 weaklyHypermeth 1.0970e-04 9.9994e-01 weaklyHypermeth 9.9725e-03 1.000000 weaklyHypermeth 0.1540156 0.0073167 lowCoverage 0.47530 lowCoverage 0.8599168 0.075301 0.7775915 5 0.7975595 0.066662 0.73089799 1.4180e-20 1.0000e+00 hypermethylated 1.4180e-17 1.0000e+00 hypermethylated 1.1666e-06 1.0000e+00 hypermethylated 3.8886e-04 1.0000e+00 hypermethylated 0.7061490 9.8466e-05 lowCoverage 7.5743e-03 lowCoverage chr3 195496642 195497642 15456 ENSG00000208323 0.016170 710 23 0.0032169 718 23 0.0688915 821 23 0.0077899 444 22 0.004662 698 23 0.0085824 1040 23 0.0038145 993 23 0.0108616 1087 23 0.010477 1079 23 0.0056763 944 23 0.014574 838 23 0.019894 963 23 0.0024429 1009 23 0.0062499 602 12 0.0072599 1181 23 0.0069895 874 23 0.007576 976 23 0.0061531 461 18 0.011086 471 23 0.0087536 795 23 0.015407 262 23 0.0019763 445 23 0.0313296 673 23 0.0069287 379 23 0.0041667 145 10 0.0028429 1298 23 0.063485 558 23 0.062814 380 23 0.0024155 448 22 0.047274 1313 23 0.000000 986 23 0.034255 880 23 0.0638470 611 23 0.2483397 405 18 0.058326 716 19 0.2244768 186 14 0.0905682 534 24 0.0506055 933 23 0.0107833 654 18 0.013646 667 18 0.0070879 391 17 0.0048819 606 18 0.034319 485 18 0.0137535 0.0043001 0.0682948 0.0066636 0.0065368 0.0089879 0.0041762 0.0098615 0.0105991 0.0067000 0.018569 0.013229 0.0028223 0.0076065 0.0068408 0.0057806 0.0083346 0.0069778 0.011745 0.013204 0.0218287 0.0006778 0.027578 0.0059242 0.0061510 0.0031670 0.0063296 0.019556 0.00341721 0.0064720 0.0000000 0.0173780 0.0511468 0.2051145 0.079353 0.1563537 0.060412 0.0489977 0.0128281 0.0130200 0.0090693 0.0052114 0.041421 17 0.011375 0.0096562 0.00174670 23 0.010018 0.043903 -0.03388428 0.2155277 7.3735e-01 insignificant 1.00000 1.000000 insignificant 0.0713439 0.97462791 insignificant 1 1.00000 insignificant -0.01118515 0.165732 insignificant 1 insignificant 0.0113745 0.0800591 -0.06866123 23 0.010018 0.0960571 -0.0860387 1.0000e+00 4.4290e-26 weaklyHypometh 1.0000e+00 1.1073e-23 weaklyHypometh 1.0000e+00 2.1341e-16 weaklyHypometh 1.0000e+00 2.1341e-13 weaklyHypometh -0.1111377 2.8433e-02 weaklyHypometh 3.6705e-01 insignificant 0.0113752 0.017481 -6.3155e-03 18 0.010404 0.011939 -0.0015354 8.5878e-01 3.0651e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.2952e-01 6.4765e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.00258745 0.68600293 insignificant 1.000000 insignificant 0.0096562 0.0800591 -0.06989287 23 0.043903 0.0960571 -0.05215440 1.0000e+00 2.1904e-15 weaklyHypometh 1.0000e+00 5.4759e-13 weaklyHypometh 1.0000e+00 2.7587e-15 weaklyHypometh 1.0000e+00 2.7587e-12 weaklyHypometh -9.9953e-02 4.0309e-02 weaklyHypometh 4.6871e-01 insignificant 0.0095312 0.017481 -0.00783814 18 0.032771 0.011939 0.0208316 9.0302e-01 7.8620e-02 insignificant 1.0000e+00 1.000000 insignificant 9.7775e-01 1.8693e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0085977 0.3428104 insignificant 1.00000 insignificant 0.0800827 0.017481 0.0509913 18 0.0997516 0.011939 0.08781242 5.1560e-04 1.0000e+00 weaklyHypermeth 4.6872e-02 1.0000e+00 weaklyHypermeth 2.2499e-04 1.0000e+00 weaklyHypermeth 3.2141e-02 1.0000e+00 weaklyHypermeth 0.1085502 3.0604e-02 weaklyHypermeth 3.9987e-01 insignificant chr3 196042842 196043842 15481 FAM43A ENSG00000185112 0.947596 266 5 0.9005361 166 5 0.6690476 30 4 0.8846748 296 6 0.900000 20 0 0.8837661 299 5 0.9111111 26 2 0.7638752 92 4 0.872253 39 3 0.9166667 30 2 0.925969 180 5 0.666667 9 0 0.8240741 49 5 0.9444444 38 5 0.8380342 55 5 0.8333333 8 0 NA 0 0 0.7652326 533 6 0.926103 172 5 0.8723270 210 4 0.870879 40 4 1.0000000 4 0 0.8804563 84 5 1.0000000 31 4 0.8604497 96 4 0.8658847 259 5 0.816667 47 4 0.708333 12 1 0.9306938 164 4 0.951107 265 5 0.914727 259 5 0.968191 198 4 0.5913361 128 5 0.6287802 115 4 0.557239 176 5 NA 0 0 0.6305556 85 5 0.7112440 244 5 0.8774251 236 6 0.831376 230 5 0.8200020 307 5 0.6513742 116 6 0.880291 182 6 0.9003777 0.8886057 0.6242560 0.8823426 0.9609375 0.9343713 0.8680556 0.7880747 0.8224588 1.0000000 0.888691 0.484375 0.6579861 1.0000000 0.7992788 0.7708333 NA 0.7156395 0.884709 0.924341 0.8760302 1.0000000 0.892113 1.0000000 0.8267609 0.8437317 0.8036458 0.836533 0.85705600 0.9083043 0.9002109 0.9343939 0.6029999 0.5833228 0.399148 NA 0.406684 0.7001292 0.8428250 0.8013501 0.8224969 0.6255106 0.823041 0 0.856290 0.8827964 -0.03312975 5 0.870679 0.896966 -0.02628700 0.9783324 1.7409e-01 insignificant 1.00000 1.000000 insignificant 0.9668837 0.22121697 insignificant 1 1.00000 insignificant -0.04224496 0.183330 lowCoverage 1 lowCoverage 0.8562898 0.6604278 0.23144490 5 0.870679 0.6106127 0.2600661 1.7340e-09 1.0000e+00 hypermethylated 2.8900e-08 1.0000e+00 hypermethylated 3.8224e-05 1.0000e+00 hypermethylated 7.6448e-04 1.0000e+00 hypermethylated 0.2312065 4.6680e-05 lowCoverage 1.9788e-03 lowCoverage 0.8559491 0.828037 4.3021e-02 5 0.746296 0.837774 -0.0914775 6.7863e-02 9.9245e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.5315e-02 9.9844e-01 weaklyHypermeth 3.8287e-01 1.00000000 insignificant 0.04294377 0.38945064 lowCoverage 1.000000 lowCoverage 0.8827964 0.6604278 0.27011080 5 0.896966 0.6106127 0.28635310 2.2330e-09 1.0000e+00 hypermethylated 4.5571e-08 1.0000e+00 hypermethylated 4.8772e-06 1.0000e+00 hypermethylated 1.2193e-04 1.0000e+00 hypermethylated 2.7345e-01 8.6038e-06 lowCoverage 6.1456e-04 lowCoverage 0.8827964 0.827877 0.08011762 5 0.896966 0.810736 0.0862299 3.1031e-03 9.9879e-01 weaklyHypermeth 8.3868e-02 1.000000 weaklyHypermeth 2.6176e-04 9.9995e-01 weaklyHypermeth 1.6728e-02 1.000000 weaklyHypermeth 0.0851887 0.1226383 lowCoverage 1.00000 lowCoverage 0.6604278 0.827877 -0.1751714 5 0.6106127 0.810736 -0.20012316 9.9876e-01 9.1835e-04 weaklyHypometh 1.0000e+00 1.2084e-02 weaklyHypometh 9.9909e-01 4.4642e-03 weaklyHypometh 1.0000e+00 7.6969e-02 weaklyHypometh -0.1882627 7.1792e-03 lowCoverage 1.3806e-01 lowCoverage chr3 196405642 196406642 15509 C3orf21 ENSG00000173950 0.734359 87 5 0.7123676 218 5 0.5578355 44 5 0.8431362 154 5 0.652137 44 3 0.6866876 200 5 0.4933862 35 3 0.8260786 101 5 0.497580 42 5 0.5400000 18 1 0.806106 219 5 0.388889 10 0 0.7106061 38 3 0.7037037 32 3 0.8334921 41 5 0.5000000 7 0 0.666667 3 0 0.8090301 53 3 0.856795 77 3 0.6713324 144 5 0.625000 22 3 0.5083333 24 3 0.7116340 53 5 0.6061935 57 3 0.7077264 78 5 0.7875676 173 5 0.637958 77 5 0.671296 25 3 0.6853205 67 3 0.750243 165 5 0.721906 185 5 0.668768 162 5 0.5472305 114 5 0.5973856 59 5 0.760757 178 5 1.0000000 35 4 0.7360353 78 4 0.8609866 157 5 0.7027569 85 5 0.668939 155 5 0.7528283 151 5 0.6388889 24 2 0.625214 167 5 0.6874567 0.7324917 0.7237042 0.9002484 0.8277200 0.8085161 0.6625912 0.8153033 0.7675601 0.5756757 0.781579 0.459459 0.8245700 0.8318318 0.8738739 0.4864865 0.6216216 0.8061828 0.833068 0.790451 0.8918919 0.7594595 0.666313 0.8148196 0.8166023 0.8283619 0.7173838 0.765766 0.77608811 0.8091938 0.7722777 0.7946355 0.7222642 0.7904964 0.650044 1.0000000 0.712065 0.8300065 0.9168417 0.8187236 0.7758078 0.7027027 0.866015 2 0.766433 0.7527574 0.01431713 5 0.546700 0.532245 0.01445494 0.5816066 9.3613e-01 insignificant 1.00000 1.000000 insignificant 0.7492691 0.82869554 insignificant 1 1.00000 insignificant 0.00101387 0.978568 lowCoverage 1 lowCoverage 0.7669221 0.7938808 0.00028217 5 0.637817 0.7014928 -0.0636762 7.3589e-01 1.3060e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.2211e-01 2.2413e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0758898 3.4356e-01 lowCoverage 1.0000e+00 lowCoverage 0.7669221 0.711340 1.7676e-02 5 0.637817 0.602819 0.0349971 8.7925e-02 5.8509e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.9993e-01 8.1202e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.00321603 0.93428510 lowCoverage 1.000000 lowCoverage 0.7541436 0.7938808 -0.02601812 5 0.620952 0.7014928 -0.08054032 3.4576e-01 1.0638e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.2459e-01 1.9728e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -7.6904e-02 3.2306e-01 lowCoverage 1.0000e+00 lowCoverage 0.7541436 0.711340 0.03070703 5 0.620952 0.602819 0.0181330 1.9543e-01 4.8920e-01 insignificant 1.0000e+00 1.000000 insignificant 2.0182e-01 8.7978e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0042299 0.8950464 lowCoverage 1.00000 lowCoverage 0.7938808 0.711340 0.0805683 5 0.7014928 0.602819 0.09867336 1.7366e-01 3.5087e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.0947e-01 7.5961e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0726738 3.5101e-01 lowCoverage 1.0000e+00 lowCoverage chr3 196411542 196412542 15510 C3orf21 ENSG00000173950 0.929745 267 11 0.7960144 207 10 0.8904336 290 10 0.8421575 318 11 0.699112 193 10 0.7338443 446 11 0.8375718 270 10 0.8303697 243 10 0.760557 196 10 0.8375128 318 10 0.876076 408 10 0.842695 203 10 0.8758134 387 10 0.9090312 149 5 0.8154407 327 10 0.8296002 165 8 0.764786 72 10 0.6301844 405 10 0.853062 276 11 0.7790197 331 11 0.819448 151 8 0.6828517 153 8 0.7642706 245 10 0.7110048 204 10 0.7960714 70 5 0.8579230 210 10 0.641652 267 10 0.665586 143 9 0.8453428 150 8 0.852973 252 10 0.903501 217 10 0.748365 321 11 0.1063347 318 10 0.1143981 247 10 0.138095 326 12 0.3939394 79 6 0.0605708 273 9 0.3375039 372 11 0.7829072 325 11 0.700808 318 11 0.7586239 289 11 0.7683735 387 6 0.739731 324 11 0.9217555 0.7882353 0.8734757 0.8818410 0.8684409 0.9055591 0.8577715 0.8708166 0.7817990 0.8789353 0.889609 0.803681 0.8676228 0.8990369 0.8230552 0.7980417 0.6928875 0.8719570 0.835509 0.909348 0.9227995 0.7038428 0.877567 0.8529149 0.8581683 0.8833601 0.8200509 0.842979 0.87057972 0.8587113 0.8676882 0.8883319 0.1746441 0.1224692 0.000000 0.4887298 0.074797 0.3382121 0.8685738 0.7932431 0.8325550 0.8110344 0.862130 6 0.851865 0.8408900 0.01017596 10 0.758355 0.660072 0.09828306 0.2197236 9.9559e-01 insignificant 1.00000 1.000000 insignificant 0.5844072 0.99309865 insignificant 1 1.00000 insignificant 0.04256897 0.164381 insignificant 1 insignificant 0.8508146 0.1510836 0.70148904 11 0.706159 0.1951699 0.5109894 2.7345e-104 1.0000e+00 hypermethylated 1.3672e-101 1.0000e+00 hypermethylated 1.1859e-21 1.0000e+00 hypermethylated 2.9647e-19 1.0000e+00 hypermethylated 0.6248443 4.7490e-05 hypermethylated 1.9788e-03 hypermethylated 0.8519809 0.797808 3.4656e-02 11 0.785169 0.737616 0.0475533 1.6843e-03 9.8298e-01 weaklyHypermeth 5.2635e-02 1.0000e+00 weaklyHypermeth 5.6389e-02 9.0506e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.06656249 0.00724176 weaklyHypermeth 0.278529 insignificant 0.8418839 0.1455817 0.69361727 10 0.725859 0.1627754 0.56308347 2.3910e-69 1.0000e+00 hypermethylated 5.9775e-67 1.0000e+00 hypermethylated 5.2042e-19 1.0000e+00 hypermethylated 1.3010e-16 1.0000e+00 hypermethylated 5.8228e-01 3.1670e-05 hypermethylated 1.5081e-03 hypermethylated 0.8445289 0.805676 0.02248643 10 0.738628 0.762634 -0.0240052 1.5441e-01 5.0998e-01 insignificant 1.0000e+00 1.000000 insignificant 4.2839e-01 4.8417e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0239935 0.4116155 insignificant 1.00000 insignificant 0.1446701 0.798289 -0.6710037 11 0.1201359 0.755353 -0.63521712 1.0000e+00 3.4032e-43 hypomethylated 1.0000e+00 1.1344e-40 hypomethylated 1.0000e+00 1.4712e-12 hypomethylated 1.0000e+00 2.9424e-10 hypomethylated -0.5582818 1.0731e-04 hypomethylated 7.6648e-03 hypomethylated chr3 196460342 196461342 15513 ENSG00000206600 0.684310 251 5 0.5351263 414 4 0.5949671 116 4 0.5799069 284 5 0.575855 73 4 0.8517007 435 5 0.6597222 106 4 0.5460609 155 4 0.548932 99 4 0.4503268 80 4 0.637411 291 4 0.461982 59 4 0.4842547 135 4 0.5531359 55 2 0.5453702 108 4 0.4285714 28 3 0.633333 42 3 0.5741025 250 5 0.703022 193 5 0.7196094 290 5 0.674784 61 4 0.4103175 98 3 0.5692249 119 4 0.8158647 113 4 0.5792693 48 3 0.6097617 354 5 0.520439 86 4 0.626984 71 4 0.5980790 178 4 0.679665 414 5 0.653429 386 5 0.568982 319 5 0.2733014 220 4 0.4218750 82 4 0.640625 231 5 0.4523810 24 2 0.4184942 241 4 0.5331597 323 5 0.7072024 299 5 0.550171 246 5 0.6111017 272 5 0.4345455 174 4 0.612697 273 5 0.5554824 0.5548849 0.5571503 0.5728512 0.5059261 0.8108248 0.6718750 0.4743407 0.5086789 0.5461984 0.597549 0.439048 0.4876577 0.5160711 0.5123430 0.3404018 0.6177083 0.6554228 0.714146 0.691015 0.7100751 0.5414776 0.662449 0.7054035 0.6033866 0.5960450 0.4800368 0.489568 0.57920091 0.6639219 0.5921694 0.6459349 0.3169658 0.4094238 0.777344 0.4731160 0.596788 0.4328680 0.6653465 0.6824304 0.6359182 0.6340436 0.654384 4 0.622113 0.6433660 -0.01534362 4 0.557737 0.678527 -0.12079014 0.8007343 6.9161e-01 lowCoverage 1.00000 1.000000 lowCoverage 0.5978990 0.59805915 lowCoverage 1 1.00000 lowCoverage -0.02051496 0.578608 lowCoverage 1 lowCoverage 0.6222928 0.5504014 0.09404569 4 0.650693 0.5184759 0.1322174 1.2503e-07 7.3242e-01 lowCoverage 1.7861e-06 1.0000e+00 lowCoverage 1.6863e-03 7.6540e-01 lowCoverage 2.2788e-02 1.0000e+00 lowCoverage 0.1317456 4.7725e-02 lowCoverage 5.5100e-01 lowCoverage 0.6222928 0.622328 -4.3368e-02 4 0.650693 0.527526 0.1231674 1.8424e-02 1.3770e-01 lowCoverage 3.6126e-01 1.0000e+00 lowCoverage 9.8421e-03 1.0771e-01 lowCoverage 2.9228e-01 1.00000000 lowCoverage 0.00524143 0.92035214 lowCoverage 1.000000 lowCoverage 0.6432071 0.5504014 0.10388564 4 0.624948 0.5184759 0.10647255 1.0686e-06 4.8075e-01 lowCoverage 1.5714e-05 1.0000e+00 lowCoverage 1.9836e-03 4.7014e-01 lowCoverage 2.7172e-02 1.0000e+00 lowCoverage 1.5226e-01 2.8991e-02 lowCoverage 3.6697e-01 lowCoverage 0.6432071 0.622328 -0.04386850 4 0.624948 0.527526 0.0974226 6.7788e-03 1.3870e-02 lowCoverage 1.7382e-01 0.577924 lowCoverage 2.3443e-02 5.4916e-02 lowCoverage 5.3921e-01 1.000000 lowCoverage 0.0257564 0.6412883 lowCoverage 1.00000 lowCoverage 0.5504014 0.622328 -0.1461795 5 0.5184759 0.527526 -0.00904997 8.4205e-01 1.8240e-03 weaklyHypometh 1.0000e+00 2.1091e-02 weaklyHypometh 9.3670e-01 1.5024e-02 weaklyHypometh 1.0000e+00 1.7592e-01 insignificant -0.1265042 9.3305e-02 lowCoverage 8.0873e-01 lowCoverage chr3 197012237 197013237 15524 MUC4 ENSG00000145113 0.741908 401 14 0.6210723 356 10 0.6585979 230 14 0.8054321 354 12 0.706146 138 8 0.6325716 293 12 0.7668014 143 8 0.7259243 256 13 0.640843 175 10 0.8710010 158 14 0.796464 561 16 0.671818 79 9 0.6895681 242 14 0.8605263 71 6 0.6629108 184 12 0.4893544 69 5 0.575000 197 7 0.6257503 432 14 0.782099 455 14 0.6955736 309 12 0.667130 116 9 0.6320982 179 11 0.7125758 186 12 0.6354388 155 5 0.7732732 247 12 0.7296430 515 14 0.673527 238 12 0.467922 77 6 0.8043388 439 14 0.801226 364 14 0.797233 336 14 0.756179 502 14 0.2087494 404 14 0.2877686 419 13 0.272727 209 6 0.3150902 183 9 0.2460827 342 14 0.3016119 588 14 0.6694496 272 14 0.806223 410 14 0.6874592 642 11 0.7371293 311 11 0.689176 382 14 0.7489650 0.6484829 0.7646021 0.7999703 0.6835645 0.7939099 0.7988915 0.7141639 0.6877688 0.8747165 0.777364 0.733975 0.6744978 0.8750011 0.6831654 0.5481485 0.7056366 0.6680899 0.822039 0.791085 0.6784841 0.6681471 0.757660 0.6609202 0.7254174 0.7465655 0.7935616 0.660848 0.79624261 0.7641720 0.7717959 0.8382761 0.1877951 0.2601668 0.134951 0.1835259 0.210772 0.4519200 0.6721405 0.7600342 0.6868552 0.7469472 0.694334 2 0.751863 0.7664778 -0.01670212 14 0.737320 0.766982 -0.02966186 0.9844214 2.1024e-01 insignificant 1.00000 1.000000 insignificant 0.9608688 0.31155824 insignificant 1 1.00000 insignificant -0.00324728 0.927488 insignificant 1 insignificant 0.7518148 0.2667910 0.48521793 14 0.721868 0.2458198 0.4760481 6.1218e-62 1.0000e+00 hypermethylated 8.7455e-60 1.0000e+00 hypermethylated 4.1060e-18 1.0000e+00 hypermethylated 6.0903e-16 1.0000e+00 hypermethylated 0.4289631 2.5450e-13 hypermethylated 6.3626e-11 hypermethylated 0.7523226 0.745662 2.8661e-02 14 0.744411 0.723637 0.0207738 1.8540e-01 3.6030e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.1390e-01 3.2361e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.01691923 0.61509458 insignificant 1.000000 insignificant 0.7662687 0.2669155 0.50312873 14 0.737854 0.2611835 0.47667072 2.2176e-52 1.0000e+00 hypermethylated 3.6960e-50 1.0000e+00 hypermethylated 6.8574e-16 1.0000e+00 hypermethylated 1.1429e-13 1.0000e+00 hypermethylated 4.3221e-01 5.6365e-10 hypermethylated 1.4091e-07 hypermethylated 0.7672956 0.745662 0.04585454 14 0.778976 0.723637 0.0553391 1.0139e-02 9.1345e-01 weaklyHypermeth 2.3579e-01 1.000000 insignificant 2.2433e-01 9.3028e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0136719 0.7210489 insignificant 1.00000 insignificant 0.2668553 0.745662 -0.4719977 14 0.2595344 0.723637 -0.46410279 1.0000e+00 3.2827e-27 hypomethylated 1.0000e+00 3.6474e-25 hypomethylated 1.0000e+00 6.4855e-11 hypomethylated 1.0000e+00 6.4855e-09 hypomethylated -0.4458823 1.2493e-06 hypomethylated 2.0822e-04 hypomethylated chr3 197058137 197059137 15525 MUC4 ENSG00000145113 0.899169 321 11 0.8551647 219 8 0.8662691 267 10 0.9653157 328 7 0.789709 192 10 0.8728455 312 9 0.8845368 233 10 0.8281589 203 10 0.756842 154 11 0.9757559 200 9 0.883303 410 11 0.848611 149 9 0.9223753 289 11 0.9223485 82 4 0.9363081 331 11 0.8721279 117 9 0.675718 60 7 0.9450127 400 9 0.829161 263 10 0.7978344 293 8 0.831590 164 10 0.7874459 135 7 0.8847260 230 10 0.8236860 135 11 0.7982091 112 6 0.9366045 400 10 0.859797 303 10 0.668056 135 7 0.8653806 227 7 0.935426 290 10 0.836433 254 10 0.949454 416 11 0.7697817 205 10 0.7956565 224 11 0.609116 225 4 0.9501087 94 6 0.7376557 204 11 0.8251242 311 9 0.8878657 282 7 0.885890 292 10 0.8057442 269 5 0.9249638 299 7 0.897424 307 10 0.9215639 0.8463151 0.8470873 0.9543379 0.8384639 0.8927165 0.9096405 0.9100531 0.8382493 0.9568139 0.879091 0.852731 0.9272498 0.9484139 0.9436719 0.6807815 0.5742348 0.9421028 0.924830 0.882197 0.9421831 0.8982292 0.826774 0.8466389 0.8634881 0.9429266 0.9218060 0.791138 0.89796639 0.9067671 0.9317556 0.9177882 0.7901113 0.8221594 0.630376 0.9203108 0.795829 0.7383157 0.8757527 0.9305505 0.9179694 0.9460945 0.894892 5 0.901514 0.8961085 -0.00023503 10 0.859945 0.839111 0.02083435 0.5103946 7.3433e-01 insignificant 1.00000 1.000000 insignificant 0.4486960 0.39710528 insignificant 1 1.00000 insignificant 0.01826099 0.519805 insignificant 1 insignificant 0.9015136 0.7767221 0.12163574 10 0.859945 0.7789814 0.0809634 2.9799e-06 9.9376e-01 weaklyHypermeth 3.6789e-05 1.0000e+00 weaklyHypermeth 1.2449e-02 9.4941e-01 weaklyHypermeth 1.2834e-01 1.0000e+00 insignificant 0.0850879 1.2680e-01 insignificant 1.0000e+00 insignificant 0.9015136 0.922705 -1.5895e-02 7 0.859945 0.852346 0.0075986 4.2509e-01 7.4745e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4215e-01 5.2721e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.01404925 0.59827180 insignificant 1.000000 insignificant 0.8961085 0.7767221 0.11616529 10 0.839111 0.7789814 0.06012907 2.6622e-05 9.8180e-01 weaklyHypermeth 3.3698e-04 1.0000e+00 weaklyHypermeth 3.6726e-03 9.1433e-01 weaklyHypermeth 4.4248e-02 1.0000e+00 weaklyHypermeth 6.6827e-02 2.2730e-01 insignificant 1.0000e+00 insignificant 0.8961085 0.922705 -0.01648971 7 0.839111 0.852346 -0.0132357 6.6748e-01 4.1537e-01 insignificant 1.0000e+00 1.000000 insignificant 6.9641e-01 2.3274e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0323102 0.3023076 insignificant 1.00000 insignificant 0.7767221 0.922705 -0.1536698 7 0.7789814 0.852346 -0.07336480 9.3664e-01 3.4251e-03 weaklyHypometh 1.0000e+00 3.6829e-02 weaklyHypometh 9.8011e-01 1.7353e-02 weaklyHypometh 1.0000e+00 1.9069e-01 insignificant -0.0991371 8.7782e-02 insignificant 7.7683e-01 insignificant chr3 197086837 197087837 15527 MUC4 ENSG00000145113 0.898950 530 18 0.8560360 641 18 0.8634052 561 17 0.9399786 443 16 0.933104 287 17 0.9329927 754 18 0.8850187 445 17 0.8762360 501 17 0.870869 476 17 0.9159926 481 17 0.908728 554 17 0.854964 263 16 0.9121114 695 17 0.8636364 57 5 0.9115468 365 17 0.8993976 120 9 0.900689 266 17 0.9139235 616 17 0.937326 448 17 0.9033757 526 18 0.872055 278 14 0.8922737 232 12 0.9256105 419 18 0.8973520 237 14 0.9228428 168 14 0.9402361 731 18 0.838138 275 17 0.882307 267 16 0.9238164 482 17 0.936863 806 18 0.953854 661 18 0.926691 789 18 0.9465389 630 18 0.9204190 422 17 0.857143 281 10 0.8848040 203 15 0.9036539 222 16 0.9431656 593 18 0.8923166 591 15 0.952825 628 17 0.9564512 385 14 0.9413006 495 18 0.942392 586 14 0.9109578 0.8662924 0.8879796 0.9441750 0.9231382 0.9455986 0.8736814 0.8697945 0.8656688 0.9112259 0.910907 0.843333 0.9172612 0.9078154 0.8970493 0.8481623 0.8619469 0.9037469 0.922863 0.924739 0.9053708 0.9059626 0.920044 0.8953973 0.9118600 0.9463788 0.8340238 0.872182 0.91790304 0.9326099 0.9503204 0.9305459 0.9362024 0.9407142 0.939176 0.8999709 0.905838 0.9459957 0.9511926 0.9395954 0.9438322 0.9484423 0.963501 14 0.905748 0.9257250 -0.01863214 17 0.906784 0.922187 -0.01540326 0.9861328 1.1319e-03 weaklyHypometh 1.00000 0.161700 insignificant 0.9766291 0.00962320 weaklyHypometh 1 0.64155 insignificant -0.01042253 0.372488 insignificant 1 insignificant 0.9057481 0.9276903 -0.01721317 17 0.906784 0.9206717 -0.0138875 9.8156e-01 4.9991e-03 weaklyHypometh 1.0000e+00 3.2754e-01 insignificant 9.9999e-01 5.7654e-04 weaklyHypometh 1.0000e+00 8.2363e-02 weaklyHypometh -0.0103733 5.2276e-01 insignificant 1.0000e+00 insignificant 0.9057481 0.952328 -4.3348e-02 15 0.906784 0.935134 -0.0283498 9.9877e-01 2.9095e-05 weaklyHypometh 1.0000e+00 7.2737e-03 weaklyHypometh 1.0000e+00 9.5310e-06 weaklyHypometh 1.0000e+00 0.00341018 weaklyHypometh -0.03814284 0.02464079 weaklyHypometh 0.528928 insignificant 0.9257250 0.9276903 0.00294416 18 0.922187 0.9206717 0.00151578 6.3815e-01 2.2711e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8438e-01 5.3553e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 4.9265e-05 9.9776e-01 insignificant 1.0000e+00 insignificant 0.9257250 0.952328 -0.02683812 15 0.922187 0.935134 -0.0129466 9.6314e-01 5.3300e-03 weaklyHypometh 1.0000e+00 0.333123 insignificant 9.9842e-01 5.9358e-03 weaklyHypometh 1.0000e+00 0.593578 insignificant -0.0277203 0.0960652 insignificant 1.00000 insignificant 0.9276903 0.952328 -0.0173089 15 0.9206717 0.935134 -0.01446233 8.1915e-01 1.7283e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.2638e-01 5.7501e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0277696 1.6321e-01 insignificant 1.0000e+00 insignificant chr3 197336937 197337937 15538 TFRC ENSG00000072274 0.841526 147 5 0.7344086 75 5 0.8084249 97 5 0.7255892 113 5 0.842500 63 5 0.7232391 295 5 0.8249468 100 5 0.7783654 92 5 0.643889 78 5 0.7798752 69 3 0.728916 167 5 0.704726 66 5 0.8014286 71 5 0.8000000 17 3 0.8654545 81 5 0.7955556 28 4 0.754630 46 5 0.8750027 106 5 0.845541 83 5 0.8331799 218 5 0.678030 43 5 0.7718254 55 5 0.6980360 107 5 0.6316993 59 5 0.9300699 37 3 0.7378049 83 5 0.833846 63 5 0.881818 33 3 0.6776094 76 5 0.639769 96 5 0.866231 91 5 0.710565 276 5 0.7741437 83 5 0.8046296 62 5 0.735671 86 5 0.9259259 11 1 0.8263889 85 5 0.6685341 103 5 0.7213889 134 5 0.789491 160 5 0.9138995 127 5 0.8605072 107 5 0.867879 122 5 0.8560177 0.8294916 0.8019552 0.8797578 0.8649834 0.8705911 0.8275040 0.7879680 0.7879249 0.9123136 0.877607 0.847868 0.8101703 0.8675410 0.8709211 0.7930831 0.8883370 0.8772951 0.839328 0.844141 0.8134407 0.9370073 0.853795 0.7704584 0.9284953 0.8911323 0.8415181 0.898856 0.82139274 0.7864763 0.8645364 0.8538825 0.7573885 0.7655997 0.761916 0.8011878 0.844049 0.7910939 0.8723951 0.8615028 0.9018506 0.8698292 0.874172 4 0.844930 0.8488714 -0.00594140 5 0.714525 0.704302 0.01022323 0.3683721 6.5382e-01 insignificant 1.00000 1.000000 insignificant 0.6755456 0.24528653 insignificant 1 1.00000 insignificant 0.03058458 0.354766 lowCoverage 1 lowCoverage 0.8449304 0.7813953 0.05856509 5 0.714525 0.7551147 -0.0405894 1.9401e-03 2.5315e-01 weaklyHypermeth 1.6582e-02 1.0000e+00 weaklyHypermeth 5.8766e-02 3.3270e-01 insignificant 4.6333e-01 1.0000e+00 insignificant -0.0038556 9.2240e-01 lowCoverage 1.0000e+00 lowCoverage 0.8449304 0.863077 -3.5378e-02 5 0.714525 0.810033 -0.0955077 9.7834e-01 1.5404e-03 weaklyHypometh 1.0000e+00 1.3970e-01 insignificant 9.8065e-01 4.9577e-03 weaklyHypometh 1.0000e+00 0.26093405 insignificant -0.04527318 0.26541591 lowCoverage 1.000000 lowCoverage 0.8488714 0.7813953 0.06423773 5 0.704302 0.7551147 -0.05081258 2.8584e-02 1.8812e-01 weaklyHypermeth 1.9177e-01 1.0000e+00 insignificant 1.1410e-01 4.1699e-01 insignificant 7.7092e-01 1.0000e+00 insignificant -3.4440e-02 4.6842e-01 lowCoverage 1.0000e+00 lowCoverage 0.8488714 0.863077 -0.03264006 5 0.704302 0.810033 -0.1057309 9.8576e-01 8.8100e-03 weaklyHypometh 1.0000e+00 0.419525 insignificant 9.8780e-01 4.6260e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.0758578 0.1193180 lowCoverage 1.00000 lowCoverage 0.7813953 0.863077 -0.0943263 5 0.7551147 0.810033 -0.05491834 9.5332e-01 5.6566e-03 weaklyHypometh 1.0000e+00 5.3872e-02 weaklyHypometh 9.9151e-01 2.5102e-02 weaklyHypometh 1.0000e+00 2.4371e-01 insignificant -0.0414175 4.2056e-01 lowCoverage 1.0000e+00 lowCoverage chr3 197404837 197405837 15543 TFRC ENSG00000072274 0.912003 153 5 0.8555233 159 5 0.8448366 83 5 0.8454005 149 5 0.727533 57 5 0.7561920 171 5 0.8709109 146 5 0.8658724 134 5 0.876681 133 5 0.9727273 57 4 0.843744 162 5 0.979524 64 3 0.8670996 81 4 0.8666667 28 2 0.9333333 76 5 0.6843993 94 5 0.937500 50 3 0.9376004 167 5 0.597656 149 5 0.9096288 155 5 0.913675 60 5 0.9019841 34 4 0.8536994 134 5 0.8483333 64 5 0.8962862 245 3 0.6050818 168 5 0.756349 55 4 0.907692 49 4 0.9059424 126 5 0.884253 130 5 0.855457 182 5 0.913717 178 5 0.4537495 103 5 0.1689048 126 5 0.000000 84 3 0.4904485 236 5 0.5672645 111 6 0.4055653 186 5 0.8420150 112 5 0.808247 136 5 0.7194419 117 3 0.7927354 173 5 0.800106 90 3 0.8968734 0.8366891 0.8140902 0.8451187 0.7944968 0.9062313 0.8733684 0.8349180 0.8735182 0.9337017 0.828452 0.973428 0.8800674 0.7462644 0.9165132 0.8286265 0.8748657 0.9421628 0.836724 0.931088 0.8862209 0.8566386 0.868544 0.7998158 0.8798691 0.8734255 0.8074717 0.909052 0.90938737 0.8899273 0.8850091 0.8717569 0.3023196 0.1516002 0.121840 0.5797801 0.645127 0.6196957 0.8374478 0.8204250 0.7767879 0.7890884 0.769441 2 0.869048 0.8701754 -0.00236216 5 0.767851 0.726748 0.04110318 0.5085113 5.7304e-01 insignificant 1.00000 1.000000 insignificant 0.8113272 0.51577510 insignificant 1 1.00000 insignificant 0.00070233 0.983606 lowCoverage 1 lowCoverage 0.8690476 0.4468085 0.43456822 5 0.767851 0.3792768 0.3885739 2.7721e-25 9.9959e-01 hypermethylated 9.9005e-24 1.0000e+00 hypermethylated 4.4236e-11 9.9998e-01 hypermethylated 2.1065e-09 1.0000e+00 hypermethylated 0.5065861 1.8081e-03 lowCoverage 4.3050e-02 lowCoverage 0.8706820 0.772293 7.8208e-02 5 0.874991 0.804840 0.0701510 1.1641e-04 8.8107e-01 weaklyHypermeth 5.2912e-03 1.0000e+00 weaklyHypermeth 5.4407e-03 8.9637e-01 weaklyHypermeth 2.0926e-01 1.00000000 insignificant 0.06173246 0.05478092 lowCoverage 0.822352 lowCoverage 0.8701754 0.4468085 0.43288068 5 0.726748 0.3792768 0.34747070 3.8320e-15 1.0000e+00 hypermethylated 1.0357e-13 1.0000e+00 hypermethylated 6.1742e-08 1.0000e+00 hypermethylated 2.2051e-06 1.0000e+00 hypermethylated 5.0588e-01 1.6623e-03 lowCoverage 3.9578e-02 lowCoverage 0.8711268 0.772293 0.09050024 5 0.867447 0.804840 0.0626066 1.0934e-03 7.5015e-01 weaklyHypermeth 3.4169e-02 1.000000 weaklyHypermeth 1.1254e-02 8.0940e-01 weaklyHypermeth 3.3101e-01 1.000000 insignificant 0.0610301 0.0843298 lowCoverage 1.00000 lowCoverage 0.4472422 0.772293 -0.3036141 5 0.4059876 0.804840 -0.39885240 9.9945e-01 4.4052e-07 hypomethylated 1.0000e+00 1.1295e-05 hypomethylated 9.9757e-01 6.8356e-05 hypomethylated 1.0000e+00 2.1028e-03 hypomethylated -0.4448536 3.4642e-03 lowCoverage 8.5222e-02 lowCoverage chr3 197412137 197413137 15544 TFRC ENSG00000072274 0.717081 389 13 0.6790394 261 14 0.6070617 174 13 0.6621423 283 13 0.601295 190 12 0.7824604 418 12 0.7360698 178 12 0.6774344 199 13 0.708523 170 12 0.7302778 139 11 0.713023 389 13 0.760737 92 3 0.6814371 206 15 0.7474590 79 9 0.6960215 151 10 0.4260462 54 5 0.460514 308 7 0.5923062 325 13 0.778685 174 13 0.6956996 308 12 0.820818 71 4 0.8028807 86 6 0.7143353 252 13 0.7427041 126 10 0.6264827 144 9 0.6848544 264 13 0.629416 117 8 0.725340 65 6 0.7225772 193 13 0.791211 274 14 0.756852 246 13 0.733402 339 12 0.6732661 264 12 0.6797098 224 11 0.686860 341 12 0.6604167 60 6 0.4830011 136 13 0.7333149 233 12 0.6424363 345 13 0.736794 400 14 0.7183969 354 11 0.6875365 213 12 0.694978 345 13 0.7420107 0.7197037 0.6851730 0.7392319 0.6811258 0.8070638 0.7525839 0.7710304 0.7451919 0.7351421 0.777703 0.826302 0.7604289 0.8234672 0.7949347 0.5751304 0.6038098 0.7367043 0.815215 0.746021 0.7716868 0.7926423 0.780307 0.7600932 0.7392391 0.7985900 0.7598221 0.766750 0.79298970 0.8044458 0.7802003 0.7585961 0.6998666 0.6708097 0.718351 0.6531533 0.586804 0.7573671 0.7366204 0.7574106 0.7071234 0.7534099 0.772537 3 0.760098 0.7896187 -0.01607193 13 0.690419 0.670392 0.02002682 0.8104219 1.4922e-01 insignificant 1.00000 1.000000 insignificant 0.9862176 0.02751096 weaklyHypometh 1 1.00000 insignificant -0.05657376 0.049860 weaklyHypometh 1 insignificant 0.7590361 0.7034976 0.07061497 13 0.646559 0.6147777 0.0317816 9.5085e-07 8.9554e-01 weaklyHypermeth 1.2190e-05 1.0000e+00 weaklyHypermeth 1.9472e-03 9.3866e-01 weaklyHypermeth 2.5963e-02 1.0000e+00 weaklyHypermeth 0.0199042 6.4166e-01 insignificant 1.0000e+00 insignificant 0.7597765 0.762221 -1.5620e-02 13 0.673220 0.697305 -0.0240850 5.2193e-01 1.3010e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.8060e-01 1.5427e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.02336278 0.39109242 insignificant 1.000000 insignificant 0.7897884 0.7032617 0.08061979 13 0.670599 0.5933765 0.07722267 2.8440e-07 9.9991e-01 weaklyHypermeth 4.5870e-06 1.0000e+00 weaklyHypermeth 5.5148e-04 9.9999e-01 weaklyHypermeth 9.0407e-03 1.0000e+00 weaklyHypermeth 7.6478e-02 9.1602e-02 insignificant 7.8747e-01 insignificant 0.7907834 0.761934 0.00552185 13 0.700242 0.679499 0.0207428 2.5636e-01 8.0362e-01 insignificant 1.0000e+00 1.000000 insignificant 2.3873e-01 9.8553e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0332110 0.1874823 insignificant 1.00000 insignificant 0.7041467 0.762077 -0.0732299 13 0.6282810 0.679499 -0.05121846 9.9858e-01 6.1417e-04 weaklyHypometh 1.0000e+00 8.5302e-03 weaklyHypometh 9.9987e-01 4.9447e-02 weaklyHypometh 1.0000e+00 4.1552e-01 insignificant -0.0432670 3.0306e-01 insignificant 1.0000e+00 insignificant chr3 197490537 197491537 15547 ENSG00000163959 0.663611 76 5 0.5401141 74 5 0.7013889 45 5 0.8247619 81 5 0.776970 45 5 0.6178212 82 5 0.6916667 26 2 0.5579657 65 5 0.504762 32 5 0.9500000 15 0 0.749576 102 5 0.800000 10 0 0.7367424 46 5 0.7500000 30 2 0.6571429 28 4 0.8000000 16 0 1.000000 6 0 0.7138655 82 5 0.794286 41 5 0.6333333 42 5 0.800000 14 0 0.6666667 3 0 0.8466667 48 5 0.5833333 25 2 0.8000000 29 2 0.7328671 64 5 0.375000 15 0 0.666667 12 0 0.6088217 42 2 0.638729 71 5 0.746296 57 5 0.732353 46 2 0.7027567 68 5 0.6690909 45 5 0.632680 69 5 0.6500000 14 0 0.6919935 55 5 0.6435516 117 5 0.7413675 70 5 0.634503 75 5 0.8038187 71 5 0.6317460 50 5 0.666667 76 5 0.7433333 0.5626210 0.6551724 0.8190476 0.7870428 0.7535874 0.6724138 0.6693712 0.5041051 0.9568966 0.710655 0.810345 0.8844044 0.7586207 0.6699507 0.7931034 0.8421413 0.7369168 0.801970 0.643678 0.8103448 0.6579267 0.837931 0.6954023 0.7718833 0.7609678 0.4655172 0.586207 0.62154225 0.7723917 0.7065134 0.7408722 0.6400644 0.6435737 0.648862 0.6551724 0.646890 0.6507541 0.7050221 0.7725348 0.8067236 0.5949097 0.688506 0 0.692797 0.6964706 -0.01176329 2 0.667156 0.684345 -0.01718860 0.6408515 4.3789e-01 lowCoverage 1.00000 1.000000 lowCoverage 0.3591817 0.56868858 lowCoverage 1 1.00000 lowCoverage 0.04008366 0.392273 lowCoverage 1 lowCoverage 0.6971983 0.6366120 0.07205468 5 0.713087 0.6408465 0.0722408 6.3832e-03 9.9759e-01 weaklyHypermeth 4.9482e-02 1.0000e+00 weaklyHypermeth 3.7642e-03 9.9893e-01 weaklyHypermeth 4.5905e-02 1.0000e+00 weaklyHypermeth 0.0581883 6.6147e-02 lowCoverage 6.7497e-01 lowCoverage 0.6927966 0.704678 -5.6721e-03 5 0.667156 0.691725 -0.0245686 3.7654e-01 2.2436e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.2757e-01 4.7465e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.02757996 0.54093705 lowCoverage 1.000000 lowCoverage 0.7019231 0.6385870 0.08224037 2 0.767678 0.7007054 0.06697263 5.9497e-02 9.9947e-01 lowCoverage 3.6278e-01 1.0000e+00 lowCoverage 1.5833e-01 9.9846e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 1.8105e-02 6.4378e-01 lowCoverage 1.0000e+00 lowCoverage 0.6964706 0.704678 -0.00424633 2 0.684345 0.691725 -0.0073800 4.4848e-01 4.5093e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 3.7131e-01 2.5703e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage -0.0125037 0.8048256 lowCoverage 1.00000 lowCoverage 0.6366120 0.705015 -0.0736094 5 0.6408465 0.696736 -0.05588981 9.0372e-01 1.2323e-02 weaklyHypometh 1.0000e+00 1.0185e-01 insignificant 9.1880e-01 1.3042e-02 weaklyHypometh 1.0000e+00 1.5714e-01 insignificant -0.0306083 4.2723e-01 lowCoverage 1.0000e+00 lowCoverage chr3 197491037 197492037 15548 ENSG00000163959 0.663611 76 5 0.5401141 74 5 0.7013889 45 5 0.8247619 81 5 0.776970 45 5 0.6178212 82 5 0.6916667 26 2 0.5579657 65 5 0.504762 32 5 0.9500000 15 0 0.749576 102 5 0.800000 10 0 0.7367424 46 5 0.7500000 30 2 0.6571429 28 4 0.8000000 16 0 1.000000 6 0 0.7138655 82 5 0.794286 41 5 0.6333333 42 5 0.800000 14 0 0.6666667 3 0 0.8466667 48 5 0.5833333 25 2 0.8000000 29 2 0.7328671 64 5 0.375000 15 0 0.666667 12 0 0.6088217 42 2 0.638729 71 5 0.746296 57 5 0.732353 46 2 0.7027567 68 5 0.6690909 45 5 0.632680 69 5 0.6500000 14 0 0.6919935 55 5 0.6435516 117 5 0.7413675 70 5 0.634503 75 5 0.8038187 71 5 0.6317460 50 5 0.666667 76 5 0.7433333 0.5626210 0.6551724 0.8190476 0.7870428 0.7535874 0.6724138 0.6693712 0.5041051 0.9568966 0.710655 0.810345 0.8844044 0.7586207 0.6699507 0.7931034 0.8421413 0.7369168 0.801970 0.643678 0.8103448 0.6579267 0.837931 0.6954023 0.7718833 0.7609678 0.4655172 0.586207 0.62154225 0.7723917 0.7065134 0.7408722 0.6400644 0.6435737 0.648862 0.6551724 0.646890 0.6507541 0.7050221 0.7725348 0.8067236 0.5949097 0.688506 0 0.692797 0.6964706 -0.01176329 2 0.667156 0.684345 -0.01718860 0.6408515 4.3789e-01 lowCoverage 1.00000 1.000000 lowCoverage 0.3591817 0.56868858 lowCoverage 1 1.00000 lowCoverage 0.04008366 0.392273 lowCoverage 1 lowCoverage 0.6971983 0.6366120 0.07205468 5 0.713087 0.6408465 0.0722408 6.3832e-03 9.9759e-01 weaklyHypermeth 4.9482e-02 1.0000e+00 weaklyHypermeth 3.7642e-03 9.9893e-01 weaklyHypermeth 4.5905e-02 1.0000e+00 weaklyHypermeth 0.0581883 6.6147e-02 lowCoverage 6.7497e-01 lowCoverage 0.6927966 0.704678 -5.6721e-03 5 0.667156 0.691725 -0.0245686 3.7654e-01 2.2436e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.2757e-01 4.7465e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.02757996 0.54093705 lowCoverage 1.000000 lowCoverage 0.7019231 0.6385870 0.08224037 2 0.767678 0.7007054 0.06697263 5.9497e-02 9.9947e-01 lowCoverage 3.6278e-01 1.0000e+00 lowCoverage 1.5833e-01 9.9846e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 1.8105e-02 6.4378e-01 lowCoverage 1.0000e+00 lowCoverage 0.6964706 0.704678 -0.00424633 2 0.684345 0.691725 -0.0073800 4.4848e-01 4.5093e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 3.7131e-01 2.5703e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage -0.0125037 0.8048256 lowCoverage 1.00000 lowCoverage 0.6366120 0.705015 -0.0736094 5 0.6408465 0.696736 -0.05588981 9.0372e-01 1.2323e-02 weaklyHypometh 1.0000e+00 1.0185e-01 insignificant 9.1880e-01 1.3042e-02 weaklyHypometh 1.0000e+00 1.5714e-01 insignificant -0.0306083 4.2723e-01 lowCoverage 1.0000e+00 lowCoverage chr3 197739137 197740137 15553 C3orf43 ENSG00000214097 0.297041 653 18 0.2211743 618 23 0.3191317 398 25 0.3906613 633 18 0.366776 301 21 0.2504394 549 18 0.3544024 428 18 0.3171003 331 18 0.254348 451 18 0.2478930 451 21 0.235770 765 24 0.293574 398 18 0.2186892 559 25 0.2013830 254 22 0.3224711 452 18 0.3474343 328 18 0.251967 802 16 0.3304714 327 17 0.301760 477 21 0.4067266 633 21 0.277468 163 16 0.2752958 225 13 0.3556750 585 21 0.2532055 343 23 0.2894847 203 17 0.3169492 548 21 0.189626 471 20 0.267923 275 17 0.2055996 577 25 0.289654 610 21 0.260759 919 25 0.216912 1239 25 0.2570944 364 21 0.2354891 535 25 0.165246 449 16 0.2318411 275 17 0.2619492 249 19 0.2043403 678 25 0.3442516 966 18 0.272374 938 25 0.2697637 702 25 0.3223006 816 18 0.306318 372 15 0.3193978 0.2369637 0.3328977 0.3896267 0.3468941 0.2451151 0.3309378 0.2720600 0.2964193 0.2862223 0.271083 0.313735 0.2407997 0.2705717 0.3367913 0.2787658 0.2753115 0.2815794 0.266474 0.386008 0.3347241 0.2801303 0.327588 0.2736243 0.3174661 0.3379472 0.2335798 0.354319 0.24943647 0.2622537 0.2748311 0.2463633 0.2066766 0.2090475 0.193627 0.1699281 0.245462 0.2609619 0.3436507 0.2909550 0.2860406 0.3363606 0.243428 11 0.295624 0.2581274 0.03269860 20 0.280816 0.215950 0.06486545 0.0021836 6.3953e-02 weaklyHypermeth 0.67508 1.000000 insignificant 0.0717330 0.88840148 insignificant 1 1.00000 insignificant 0.02991455 0.126037 insignificant 1 insignificant 0.2955590 0.2086275 0.08972838 20 0.253998 0.1963383 0.0576597 1.1136e-09 9.9922e-01 weaklyHypermeth 1.9536e-08 1.0000e+00 weaklyHypermeth 3.2080e-07 9.9998e-01 weaklyHypermeth 8.5980e-06 1.0000e+00 weaklyHypermeth 0.0704672 3.2430e-03 weaklyHypermeth 6.9951e-02 weaklyHypermeth 0.2955891 0.250923 -7.7252e-03 20 0.263767 0.269200 -0.0054331 8.1525e-01 4.3247e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6447e-01 5.3791e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.00654087 0.74424824 insignificant 1.000000 insignificant 0.2584215 0.2086275 0.06007314 25 0.231947 0.1963383 0.03560848 3.4982e-06 9.9927e-01 weaklyHypermeth 4.7921e-05 1.0000e+00 weaklyHypermeth 1.1057e-04 9.9973e-01 weaklyHypermeth 2.2114e-03 1.0000e+00 weaklyHypermeth 4.0553e-02 6.4055e-02 insignificant 6.6723e-01 insignificant 0.2584635 0.250923 -0.04029250 25 0.240868 0.269200 -0.0283325 7.7304e-01 3.7048e-03 weaklyHypometh 1.0000e+00 0.293258 insignificant 9.7762e-01 6.4899e-02 insignificant 1.0000e+00 1.000000 insignificant -0.0364554 0.0913168 insignificant 1.00000 insignificant 0.2087093 0.250923 -0.0948955 25 0.2038898 0.269200 -0.06531050 9.9998e-01 1.2500e-08 weaklyHypometh 1.0000e+00 3.7877e-07 weaklyHypometh 1.0000e+00 7.6845e-05 weaklyHypometh 1.0000e+00 2.2602e-03 weaklyHypometh -0.0770081 4.7006e-03 weaklyHypometh 1.0306e-01 insignificant chr3 197785837 197786837 15556 FBXO45 ENSG00000174013 0.706349 97 4 0.5750490 111 6 0.4940476 50 5 0.7468231 107 6 0.611953 44 5 0.6880711 139 6 0.4576389 55 5 0.5876089 114 6 0.583333 43 5 0.8317460 40 4 0.613687 187 6 0.277778 9 0 0.6126218 96 6 0.6018519 35 4 0.5343915 67 6 0.3333333 12 1 0.522222 24 2 0.7642022 89 5 0.634829 89 4 0.6892483 75 6 0.628205 21 1 0.7555556 36 4 0.6256221 83 6 0.5556723 43 4 0.6777778 25 2 0.6598695 129 6 0.618667 52 5 0.571429 27 3 0.6063034 73 6 0.716619 146 6 0.690356 109 6 0.592098 114 6 0.5192308 80 6 0.5114057 54 6 0.601326 123 6 0.3750000 6 0 0.7472222 31 3 0.5218493 117 6 0.7075758 57 6 0.821429 106 6 0.6936837 101 6 0.6955128 57 6 0.702614 92 6 0.7883598 0.6053380 0.5714286 0.8345552 0.7514029 0.7850544 0.5793981 0.6361383 0.6944444 0.8566138 0.676410 0.296296 0.6976121 0.6975309 0.6340388 0.5178235 0.6412803 0.8454470 0.688177 0.760069 0.6730769 0.8351852 0.738561 0.6748366 0.6666667 0.7513328 0.5744613 0.658730 0.64031339 0.7716882 0.7780669 0.6968205 0.5897436 0.4919473 0.685606 0.4110408 0.827778 0.5752069 0.8050505 0.9110450 0.7821016 0.8025641 0.766340 1 0.708024 0.7331002 -0.02436630 5 0.617119 0.640861 -0.02374218 0.6499090 3.1053e-01 insignificant 1.00000 1.000000 insignificant 0.6456213 0.46684238 insignificant 1 1.00000 insignificant -0.04817526 0.177870 lowCoverage 1 lowCoverage 0.7080243 0.6472019 0.05946150 5 0.617119 0.5617357 0.0553835 3.8539e-02 9.8134e-01 weaklyHypermeth 2.5355e-01 1.0000e+00 insignificant 5.5354e-02 9.5209e-01 insignificant 4.4641e-01 1.0000e+00 insignificant 0.0473336 4.3950e-01 lowCoverage 1.0000e+00 lowCoverage 0.7080243 0.799031 -1.0735e-01 5 0.617119 0.731461 -0.1143418 9.9955e-01 1.0561e-03 weaklyHypometh 1.0000e+00 1.0561e-01 insignificant 9.9843e-01 6.1625e-03 weaklyHypometh 1.0000e+00 0.30812274 insignificant -0.13082380 0.00364970 lowCoverage 0.182485 lowCoverage 0.7331002 0.6472019 0.08258920 5 0.640861 0.5617357 0.07912571 2.8766e-02 9.9763e-01 weaklyHypermeth 1.9177e-01 1.0000e+00 insignificant 1.6031e-02 9.7755e-01 weaklyHypermeth 1.5414e-01 1.0000e+00 insignificant 9.5509e-02 1.1985e-01 lowCoverage 9.5877e-01 lowCoverage 0.7331002 0.799031 -0.08789138 6 0.640861 0.731461 -0.0905996 9.9828e-01 3.4995e-03 weaklyHypometh 1.0000e+00 0.293258 insignificant 9.9653e-01 9.3900e-03 weaklyHypometh 1.0000e+00 0.782496 insignificant -0.0826485 0.0239648 lowCoverage 0.77774 lowCoverage 0.6472019 0.799031 -0.1742378 5 0.5617357 0.731461 -0.16972529 9.9999e-01 6.4047e-06 weaklyHypometh 1.0000e+00 1.4233e-04 weaklyHypometh 1.0000e+00 8.0255e-04 weaklyHypometh 1.0000e+00 1.8025e-02 weaklyHypometh -0.1781574 1.4702e-02 lowCoverage 2.4919e-01 lowCoverage chr3 197805937 197806937 15557 FBXO45 ENSG00000174013 0.817588 495 17 0.7443875 590 17 0.7818389 254 17 0.7416507 322 17 0.813847 215 17 0.7196795 555 17 0.7840459 271 17 0.8512164 355 17 0.841119 279 17 0.8072926 172 16 0.677136 694 19 0.764666 133 15 0.7178945 253 11 0.7366567 100 13 0.7415162 306 17 0.6926938 170 12 0.673934 703 10 0.8218190 317 16 0.800823 457 17 0.8141590 548 17 0.789791 178 16 0.6648102 328 14 0.7984334 388 17 0.7942985 334 17 0.7454731 317 15 0.7547650 617 17 0.646838 394 17 0.678378 177 12 0.8241962 342 17 0.816779 594 19 0.754312 662 19 0.685592 747 17 0.7428095 416 17 0.6938954 308 17 0.776124 551 19 0.7220947 124 11 0.7191829 386 17 0.7781407 517 17 0.7683174 513 17 0.769482 456 17 0.7819340 397 17 0.7599491 297 15 0.775098 353 17 0.8114180 0.7511512 0.7768285 0.7635796 0.8091777 0.7871870 0.8185489 0.8107567 0.7991233 0.7837167 0.792240 0.758613 0.8170893 0.7180919 0.8131919 0.7118043 0.7745683 0.7778165 0.768612 0.828692 0.7937788 0.7618783 0.790553 0.7683801 0.7872931 0.8000870 0.7221287 0.718141 0.78614092 0.8075886 0.7754493 0.7928360 0.7249198 0.7167920 0.772695 0.8115546 0.728793 0.7696855 0.7815859 0.8304160 0.7904964 0.8152181 0.796700 13 0.795243 0.8072076 0.00414053 17 0.724670 0.700220 0.02444977 0.1679163 3.8459e-01 insignificant 1.00000 1.000000 insignificant 0.1743764 0.86861600 insignificant 1 1.00000 insignificant 0.02105937 0.343145 insignificant 1 insignificant 0.7957678 0.7767159 0.04752209 17 0.747920 0.6990245 0.0488957 1.0386e-05 9.8021e-01 weaklyHypermeth 1.2077e-04 1.0000e+00 weaklyHypermeth 5.7374e-03 9.8699e-01 weaklyHypermeth 6.6329e-02 1.0000e+00 weaklyHypermeth 0.0284904 1.4189e-01 insignificant 1.0000e+00 insignificant 0.7955401 0.796627 -9.4232e-03 17 0.741571 0.756663 -0.0150918 6.5181e-01 8.3710e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 8.3808e-01 2.7187e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.00375796 0.76879776 insignificant 1.000000 insignificant 0.8074497 0.7767159 0.04273473 17 0.708563 0.6990245 0.00953827 5.4241e-04 9.3500e-01 weaklyHypermeth 5.4241e-03 1.0000e+00 weaklyHypermeth 8.8204e-02 9.2391e-01 insignificant 6.1253e-01 1.0000e+00 insignificant 7.4310e-03 7.4716e-01 insignificant 1.0000e+00 insignificant 0.8080032 0.796627 -0.01632312 17 0.761109 0.756663 0.0044456 9.4428e-01 2.2060e-01 insignificant 1.0000e+00 1.000000 insignificant 9.7911e-01 2.7587e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0248173 0.2025589 insignificant 1.00000 insignificant 0.7779713 0.797418 -0.0568717 17 0.7474206 0.791057 -0.04363645 9.9976e-01 7.2595e-03 weaklyHypometh 1.0000e+00 6.7217e-02 weaklyHypometh 9.9893e-01 1.5278e-02 weaklyHypometh 1.0000e+00 1.7592e-01 insignificant -0.0322484 6.5691e-02 insignificant 6.4158e-01 insignificant chr3 198054337 198055337 15566 RNU6-42 ENSG00000206892 0.914286 69 5 0.7070738 84 3 0.7812831 81 3 0.9409897 94 4 0.954365 46 3 0.8676316 221 6 0.8444444 57 3 0.8541114 81 3 0.867725 75 3 0.9833333 53 3 0.942343 140 3 0.735043 25 3 0.9212963 67 3 0.6527311 47 3 0.9428105 88 3 0.9594017 64 3 0.746591 54 2 0.9382888 76 4 0.857502 93 5 0.8846402 138 5 0.908333 22 4 0.8491228 43 2 0.8820160 84 5 0.9239130 46 3 0.7166667 11 1 0.8359697 168 6 0.694742 48 3 0.892424 38 3 0.8043623 59 3 0.891708 163 5 0.922109 149 5 0.738520 183 6 0.6765873 90 3 1.0000000 16 2 0.761905 58 4 0.8246753 34 3 0.8219188 125 4 0.8710165 108 5 0.9322893 67 4 0.912297 84 5 0.9682957 101 5 0.9527778 32 4 0.889184 85 5 0.9422222 0.6938854 0.7152910 0.9510738 0.9417989 0.9037760 0.8374603 0.8602122 0.8769841 0.9866667 0.933579 0.754701 0.8987654 0.8733894 0.9202614 0.9649573 0.7970832 0.8983244 0.918841 0.917279 0.9200000 0.8557895 0.911643 0.9188406 0.6432925 0.9110047 0.6884135 0.848889 0.84326784 0.9191733 0.9079365 0.8994122 0.7232804 1.0000000 0.929274 0.9004375 0.770308 0.8182051 0.8970410 0.9583663 0.9515789 0.9666667 0.985714 1 0.863884 0.8599606 0.00062043 4 0.862657 0.836784 0.02587356 0.2943206 8.5470e-01 lowCoverage 1.00000 1.000000 lowCoverage 0.0586896 0.98233656 lowCoverage 1 1.00000 lowCoverage 0.02647069 0.410452 lowCoverage 1 lowCoverage 0.8638838 0.7842227 0.06918730 4 0.862657 0.7684572 0.0942001 3.8410e-03 9.8226e-01 lowCoverage 3.0975e-02 1.0000e+00 lowCoverage 2.0614e-01 9.2386e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0387774 4.5337e-01 lowCoverage 1.0000e+00 lowCoverage 0.8638838 0.910569 -8.1374e-02 4 0.862657 0.914099 -0.0514415 9.7444e-01 3.0718e-03 lowCoverage 1.0000e+00 1.8069e-01 lowCoverage 9.9567e-01 6.7120e-03 lowCoverage 1.0000e+00 0.31962054 lowCoverage -0.06617422 0.01652156 lowCoverage 0.418374 lowCoverage 0.8599606 0.7842227 0.06829871 4 0.836784 0.7684572 0.06832657 2.3556e-02 9.7685e-01 lowCoverage 1.6134e-01 1.0000e+00 lowCoverage 7.6377e-01 7.1688e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 1.2307e-02 8.1239e-01 lowCoverage 1.0000e+00 lowCoverage 0.8599606 0.910569 -0.08295415 4 0.836784 0.914099 -0.0773151 9.9836e-01 9.3657e-04 lowCoverage 1.0000e+00 0.133796 lowCoverage 9.9984e-01 2.9790e-04 lowCoverage 1.0000e+00 0.094329 lowCoverage -0.0926449 0.0042089 lowCoverage 0.40961 lowCoverage 0.7842227 0.910569 -0.1492781 5 0.7684572 0.914099 -0.14564163 9.9998e-01 7.6727e-05 weaklyHypometh 1.0000e+00 1.3701e-03 weaklyHypometh 9.9990e-01 2.0840e-02 weaklyHypometh 1.0000e+00 2.1484e-01 insignificant -0.1049516 6.4651e-02 lowCoverage 6.4011e-01 lowCoverage chr3 198189837 198190837 15570 PIGZ ENSG00000119227 0.871906 532 13 0.7457863 686 13 0.7593832 272 13 0.7878522 442 11 0.830536 189 10 0.8851032 552 12 0.7647140 338 10 0.8558389 265 11 0.795479 228 10 0.8184321 195 10 0.802171 498 11 0.804120 125 7 0.8187160 212 10 0.8217593 77 5 0.8273862 191 10 0.7697452 132 7 0.756692 2148 8 0.7579801 372 11 0.842660 282 11 0.8701337 501 13 0.681462 122 10 0.7179154 83 7 0.7420589 343 13 0.7945707 136 10 0.7219976 278 11 0.8562939 513 13 0.724336 159 11 0.540154 112 9 0.7877700 334 11 0.870634 508 12 0.815394 490 13 0.869686 532 11 0.6746406 488 13 0.6824167 312 11 0.631353 503 12 0.6726258 178 9 0.6754707 309 11 0.7871231 580 13 0.8253840 577 11 0.870128 563 11 0.8174934 483 11 0.8045906 417 10 0.762115 566 11 0.8595391 0.7505115 0.8046024 0.8507260 0.8173896 0.8550288 0.8380217 0.8429040 0.8444758 0.8367679 0.838948 0.825881 0.8331356 0.8733382 0.8683983 0.8371581 0.8422800 0.8613891 0.851655 0.861122 0.6859519 0.6468364 0.810867 0.8617918 0.6634170 0.8511471 0.7437862 0.791211 0.85264844 0.8372411 0.8139580 0.8684203 0.6862240 0.7670211 0.671290 0.6263268 0.768763 0.7900476 0.8255493 0.8532752 0.8323915 0.8744572 0.786249 9 0.879082 0.8316694 0.02209570 11 0.826529 0.804460 0.02206933 0.0973261 9.4285e-01 insignificant 1.00000 1.000000 insignificant 0.0859843 0.99901164 insignificant 1 1.00000 insignificant 0.04913026 0.110880 insignificant 1 insignificant 0.8790528 0.7441959 0.12435232 11 0.814138 0.7315207 0.0826176 3.0240e-11 9.8310e-01 weaklyHypermeth 6.1714e-10 1.0000e+00 weaklyHypermeth 1.0696e-05 9.9075e-01 weaklyHypermeth 2.4873e-04 1.0000e+00 weaklyHypermeth 0.1220481 1.1613e-03 weaklyHypermeth 3.0478e-02 weaklyHypermeth 0.8790528 0.861090 2.4704e-02 11 0.814138 0.810293 0.0038449 5.2502e-01 6.5646e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.7769e-01 5.2917e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.00662240 0.74842737 insignificant 1.000000 insignificant 0.8312552 0.7443038 0.09991761 13 0.771126 0.7494193 0.02170713 6.8061e-06 9.8538e-01 weaklyHypermeth 9.1975e-05 1.0000e+00 weaklyHypermeth 2.8670e-03 9.6103e-01 weaklyHypermeth 3.5395e-02 1.0000e+00 weaklyHypermeth 7.2918e-02 5.1462e-02 insignificant 5.7180e-01 insignificant 0.8316227 0.861090 -0.01231390 11 0.790493 0.810293 -0.0198008 8.8409e-01 4.3113e-01 insignificant 1.0000e+00 1.000000 insignificant 9.9325e-01 2.0102e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0557527 0.1050693 insignificant 1.00000 insignificant 0.7441959 0.861090 -0.1138818 11 0.7315207 0.810293 -0.07877269 9.9707e-01 1.8349e-03 weaklyHypometh 1.0000e+00 2.1091e-02 weaklyHypometh 9.9945e-01 6.6551e-03 weaklyHypometh 1.0000e+00 1.0564e-01 insignificant -0.1286705 1.1839e-03 weaklyHypometh 4.3286e-02 weaklyHypometh chr3 198589937 198590937 15584 DLG1 ENSG00000075711 0.687864 369 9 0.7255981 225 8 0.6378227 134 8 0.7475385 213 9 0.772886 91 7 0.6877103 522 10 0.7467816 133 8 0.7465228 168 8 0.754742 108 8 0.8931319 126 8 0.788613 298 8 0.693403 75 5 0.7664548 145 8 0.9111111 24 2 0.7540605 158 8 0.7214052 64 5 0.693518 555 7 0.7076281 276 10 0.684833 282 10 0.7454780 391 10 0.776799 67 6 0.8129490 86 5 0.6558246 196 10 0.7451589 102 7 0.9468254 70 4 0.6970713 356 10 0.750172 99 6 0.585185 52 6 0.7610665 131 8 0.548981 335 10 0.710134 304 10 0.681337 439 10 0.7187518 185 8 0.6958269 146 8 0.636003 314 10 0.7636077 55 5 0.8232879 120 8 0.6528615 357 10 0.7880586 303 9 0.734776 304 9 0.7046595 332 9 0.6425823 281 9 0.692267 338 10 0.7966237 0.7325914 0.7241046 0.8123229 0.8868110 0.7737500 0.7464375 0.7420770 0.7479386 0.8585724 0.784999 0.750984 0.8164823 0.8033990 0.8339328 0.7890806 0.8142255 0.8032534 0.757329 0.835107 0.8152589 0.8227082 0.771465 0.7784266 0.8987252 0.8232849 0.7386162 0.740744 0.79225675 0.8087526 0.8201122 0.7399991 0.6773424 0.6855275 0.616530 0.7578463 0.796195 0.7710382 0.8430162 0.8450321 0.8094753 0.7798227 0.808607 5 0.759531 0.7510058 0.00798275 10 0.731687 0.686510 0.04517715 0.0446284 4.4928e-01 weaklyHypermeth 1.00000 1.000000 insignificant 0.1489062 0.42231700 insignificant 1 1.00000 insignificant 0.02072967 0.545274 insignificant 1 insignificant 0.7595315 0.6788445 0.07658919 10 0.731687 0.6862276 0.0454593 3.0732e-04 9.7291e-01 weaklyHypermeth 3.0129e-03 1.0000e+00 weaklyHypermeth 6.9606e-02 9.7780e-01 insignificant 5.3543e-01 1.0000e+00 insignificant 0.0282986 4.0524e-01 insignificant 1.0000e+00 insignificant 0.7595315 0.795250 -1.5121e-02 9 0.731687 0.762704 -0.0310168 7.9492e-01 2.0826e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.2233e-01 2.9637e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.03088635 0.30780452 insignificant 1.000000 insignificant 0.7510058 0.6788445 0.06870235 10 0.686510 0.6862276 0.00028217 2.3438e-03 9.7158e-01 weaklyHypermeth 2.0560e-02 1.0000e+00 weaklyHypermeth 3.7291e-02 9.8273e-01 weaklyHypermeth 2.9946e-01 1.0000e+00 insignificant 7.5689e-03 8.5812e-01 insignificant 1.0000e+00 insignificant 0.7510058 0.795250 -0.02131122 9 0.686510 0.762704 -0.0761940 6.8346e-01 1.8415e-02 weaklyHypometh 1.0000e+00 0.657667 insignificant 7.2027e-01 2.9524e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0101567 0.7961873 insignificant 1.00000 insignificant 0.6788445 0.795250 -0.0891552 9 0.6862276 0.762704 -0.07647617 9.6601e-01 9.6974e-04 weaklyHypometh 1.0000e+00 1.2594e-02 weaklyHypometh 9.8877e-01 6.1894e-02 insignificant 1.0000e+00 4.9515e-01 insignificant 0.0025877 9.4633e-01 insignificant 1.0000e+00 insignificant chr3 198605137 198606137 15585 DLG1 ENSG00000075711 0.902919 340 6 0.7493056 114 6 0.7390491 89 6 0.9594323 395 6 0.976190 43 6 0.9160307 317 6 0.8592657 71 6 0.8900463 99 6 0.811822 61 6 0.8940476 93 6 0.919919 161 6 0.869048 46 6 0.5982868 194 6 0.8666667 30 6 0.7859440 111 6 0.9583333 25 2 1.000000 4 0 0.7262567 437 6 0.729396 64 6 0.8750599 216 6 0.881633 44 4 0.8794001 154 6 0.9553728 71 6 0.8571429 35 6 0.8753968 63 6 0.7686089 213 6 0.762302 67 6 0.828571 29 4 0.9131054 67 6 0.859890 156 6 0.905729 121 6 0.899994 274 6 0.8029158 127 6 0.8671802 89 6 1.000000 180 6 0.8263889 36 6 0.8335561 74 6 0.7634378 140 6 0.8906364 234 6 0.953767 302 6 0.9099217 365 6 0.9429371 313 6 0.907383 318 6 0.9035553 0.7399759 0.7212718 0.9605013 0.9772130 0.9005492 0.8480201 0.8820297 0.8133094 0.8910167 0.917626 0.873247 0.5868431 0.8490798 0.7872988 0.9601227 0.9664811 0.7189636 0.709679 0.873308 0.8655565 0.8759976 0.952527 1.0000000 0.8659947 0.7605388 0.7557990 0.817879 0.91373027 0.8528939 0.9047121 0.8977232 0.7839583 0.8509907 1.000000 0.8029141 0.829916 0.7459633 0.8873558 0.9516600 0.9069641 0.9425153 0.909013 4 0.848110 0.8670788 -0.02412170 6 0.866568 0.815521 0.05104707 0.9541300 1.3463e-01 insignificant 1.00000 1.000000 insignificant 0.9049040 0.28238884 insignificant 1 1.00000 insignificant -0.01424459 0.616846 insignificant 1 insignificant 0.8480578 0.8606811 -0.01731773 6 0.844329 0.8617859 -0.0174567 7.4433e-01 1.5419e-03 weaklyHypometh 1.0000e+00 1.1861e-01 insignificant 6.3838e-01 1.2285e-02 weaklyHypometh 1.0000e+00 8.7750e-01 insignificant 0.0024378 9.5313e-01 insignificant 1.0000e+00 insignificant 0.8480578 0.923629 -7.5074e-02 6 0.844329 0.921710 -0.0773804 9.9995e-01 3.7366e-03 weaklyHypometh 1.0000e+00 2.0759e-01 insignificant 9.9646e-01 5.7067e-02 insignificant 1.0000e+00 1.00000000 insignificant -0.06957812 0.01296602 weaklyHypometh 0.390652 insignificant 0.8676471 0.8606811 0.00711321 6 0.868108 0.8617859 0.00632175 6.4564e-01 2.4415e-02 inconclusive 1.0000e+00 1.0000e+00 insignificant 5.5211e-01 1.4047e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.6682e-02 6.6581e-01 insignificant 1.0000e+00 insignificant 0.8676471 0.923629 -0.05347307 6 0.868108 0.921710 -0.0536019 9.9908e-01 1.0677e-02 weaklyHypometh 1.0000e+00 0.485334 insignificant 9.7116e-01 1.1504e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0553335 0.0153135 weaklyHypometh 0.66581 insignificant 0.8606811 0.923629 -0.0605016 6 0.8617859 0.921710 -0.05992367 4.4757e-01 2.6363e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.1126e-01 5.0812e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0720159 8.6233e-02 insignificant 7.6994e-01 insignificant chr3 198667337 198668337 15592 DLG1 ENSG00000075711 0.046145 691 27 0.0631659 974 29 0.1456236 857 29 0.0243716 427 21 0.043850 505 26 0.0877428 929 29 0.0410107 1024 25 0.0549970 698 26 0.066456 877 26 0.0470616 648 22 0.039429 870 26 0.125989 898 24 0.0119074 768 19 0.1416667 26 2 0.0691496 906 23 0.0978402 858 20 0.017351 849 20 0.0302205 393 20 0.025230 562 22 0.0384215 777 27 0.028076 311 21 0.0684286 213 13 0.0408769 900 29 0.0149770 411 21 0.0746227 518 13 0.0177860 1200 29 0.046142 265 19 0.041594 231 20 0.0495609 633 26 0.020309 1234 29 0.070665 1135 29 0.038798 1181 28 0.0384768 718 28 0.0218591 681 26 0.083333 534 24 0.0536981 586 15 0.0353788 273 22 0.0067608 940 28 0.0685008 856 29 0.100338 799 28 0.0253313 515 23 0.0298312 702 26 0.049980 561 25 0.0503400 0.0161969 0.1237610 0.0221991 0.0310939 0.0609529 0.0287292 0.0378217 0.0493940 0.0159507 0.032884 0.109241 0.0263807 0.0357272 0.0453220 0.0993399 0.0375039 0.0153826 0.014502 0.034184 0.0171513 0.0351962 0.037910 0.0205635 0.0184814 0.0165830 0.0375096 0.029698 0.03953308 0.0140176 0.0601141 0.0417350 0.0211371 0.0172578 0.027955 0.0156619 0.017055 0.0031064 0.0452328 0.1000768 0.0307195 0.0193975 0.033175 9 0.046371 0.0360831 0.01281298 26 0.061349 0.050948 0.01040093 0.0035236 9.9996e-01 weaklyHypermeth 0.70471 1.000000 insignificant 0.0036488 0.99986865 weaklyHypermeth 1 1.00000 insignificant 0.01822846 0.098719 insignificant 1 insignificant 0.0463868 0.0490354 0.02018724 26 0.065439 0.0319321 0.0335072 7.4138e-11 9.9999e-01 weaklyHypermeth 1.4257e-09 1.0000e+00 weaklyHypermeth 3.1273e-11 1.0000e+00 weaklyHypermeth 1.6460e-09 1.0000e+00 weaklyHypermeth 0.0209637 1.5963e-01 insignificant 1.0000e+00 insignificant 0.0463275 0.061754 -4.2973e-03 26 0.056202 0.058501 -0.0022996 1.8359e-01 4.5680e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.7422e-01 7.9560e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.00608532 0.72001218 insignificant 1.000000 insignificant 0.0361138 0.0490354 0.00538501 28 0.054345 0.0319321 0.02241289 2.2918e-06 9.9982e-01 weaklyHypermeth 3.2278e-05 1.0000e+00 weaklyHypermeth 1.1970e-05 9.9999e-01 weaklyHypermeth 2.8501e-04 1.0000e+00 weaklyHypermeth 2.7352e-03 8.3025e-01 insignificant 1.0000e+00 insignificant 0.0360010 0.061754 -0.01925984 26 0.038978 0.058501 -0.0195236 9.0639e-01 1.6857e-02 weaklyHypometh 1.0000e+00 0.657667 insignificant 8.7827e-01 1.4897e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0121431 0.4505138 insignificant 1.00000 insignificant 0.0490485 0.061754 -0.0095849 26 0.0330332 0.058501 -0.02546800 1.0000e+00 8.8347e-06 weaklyHypometh 1.0000e+00 1.8797e-04 weaklyHypometh 1.0000e+00 1.8464e-04 weaklyHypometh 1.0000e+00 4.8590e-03 weaklyHypometh -0.0148784 4.1983e-01 insignificant 1.0000e+00 insignificant chr3 198950237 198951237 15609 MIR922 ENSG00000145016 0.812150 469 17 0.7954932 535 15 0.7090552 482 15 0.8004190 408 15 0.788013 79 7 0.8123352 448 17 0.6659995 77 9 0.7713141 163 10 0.732403 86 7 0.8006584 103 7 0.765980 286 11 0.547619 30 2 0.7681387 205 12 0.7738248 64 6 0.8745349 135 11 0.7705128 40 3 0.944444 28 2 0.8186859 423 15 0.717149 149 9 0.8253520 396 16 0.800824 94 8 0.8546032 54 6 0.7799177 414 15 0.7097070 78 7 0.8410985 46 5 0.7868741 529 18 0.844508 120 10 0.789116 37 4 0.6703814 132 5 0.816324 619 19 0.783986 490 18 0.776174 520 16 0.8206970 514 17 0.6787411 143 9 0.766205 381 14 0.6666667 30 3 0.7757576 104 6 0.7240311 524 19 0.8273073 480 15 0.746686 479 14 0.8487217 347 15 0.8104468 460 15 0.798692 436 14 0.8357228 0.8219836 0.7305906 0.8492840 0.7238917 0.9194218 0.7318529 0.8353607 0.8550908 0.8516318 0.840007 0.700661 0.9047778 0.9167174 0.8458761 0.8305556 0.8840399 0.8938272 0.785017 0.870786 0.8353878 0.9102997 0.908438 0.8622507 0.7707718 0.8110025 0.8603684 0.876984 0.73382819 0.8850612 0.8928444 0.8794364 0.8089225 0.7605830 0.698673 0.7088889 0.845581 0.7963491 0.8570387 0.8865069 0.8409606 0.8609133 0.824785 4 0.813287 0.8282796 -0.01300484 14 0.774668 0.749880 0.02478769 0.9447856 2.3291e-01 insignificant 1.00000 1.000000 insignificant 0.8849837 0.56009369 insignificant 1 1.00000 insignificant -0.01308871 0.583625 insignificant 1 insignificant 0.8132465 0.7806604 0.04987851 14 0.764871 0.7546725 0.0101986 2.8458e-03 9.0471e-01 weaklyHypermeth 2.3715e-02 1.0000e+00 weaklyHypermeth 1.4019e-01 9.7029e-01 insignificant 9.4266e-01 1.0000e+00 insignificant 0.0360211 2.5851e-01 insignificant 1.0000e+00 insignificant 0.8132465 0.832425 -2.8556e-02 14 0.764871 0.780207 -0.0153355 9.7841e-01 1.1814e-02 weaklyHypometh 1.0000e+00 3.6918e-01 insignificant 9.4720e-01 1.0404e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.03166663 0.22138266 insignificant 1.000000 insignificant 0.8288087 0.7806604 0.05914445 14 0.782484 0.7546725 0.02781147 7.6886e-05 9.9741e-01 weaklyHypermeth 9.0454e-04 1.0000e+00 weaklyHypermeth 2.8370e-02 9.9807e-01 weaklyHypermeth 2.4165e-01 1.0000e+00 insignificant 4.9110e-02 1.2276e-01 insignificant 9.6659e-01 insignificant 0.8288087 0.832425 -0.02052834 14 0.782484 0.780207 0.0022774 7.4958e-01 7.5732e-02 insignificant 1.0000e+00 1.000000 insignificant 8.3292e-01 4.6437e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0185779 0.4385975 insignificant 1.00000 insignificant 0.7806604 0.832425 -0.0880511 14 0.7546725 0.780207 -0.02553407 9.9885e-01 4.6827e-04 weaklyHypometh 1.0000e+00 6.7866e-03 weaklyHypometh 9.9856e-01 3.5880e-02 weaklyHypometh 1.0000e+00 3.1473e-01 insignificant -0.0676878 5.0788e-02 insignificant 5.5811e-01 insignificant chr3 199135337 199136337 15613 ENSG00000199306 0.756250 93 6 0.7768519 133 6 0.5962293 58 6 0.7136905 106 6 0.805556 56 6 0.6942435 174 6 0.7638889 32 4 0.6203704 98 6 0.775000 35 2 0.6994709 53 6 0.721929 188 6 0.666667 24 0 0.6400890 116 6 0.8605664 45 2 0.7717836 75 6 0.7777778 21 0 0.500000 4 0 0.8109217 108 6 0.765269 137 6 0.7978699 136 6 0.643939 35 2 0.8055556 59 5 0.7704545 85 6 0.7770833 57 2 0.7629630 39 6 0.7057455 189 6 0.607594 95 6 0.809524 17 1 0.7440957 110 6 0.729977 175 6 0.601482 82 6 0.608342 203 6 0.6882783 128 6 0.6309524 89 6 0.835859 224 6 0.4000000 9 0 0.6103480 50 6 0.7255256 155 6 0.6272894 77 6 0.779836 133 6 0.7760684 113 6 0.7919192 77 6 0.787179 87 6 0.7777778 0.6840635 0.5221360 0.7409297 0.8227513 0.7064764 0.7793651 0.7769841 0.7885714 0.7409070 0.737833 0.700000 0.6631743 0.8639278 0.7855305 0.8000000 0.6620183 0.8259380 0.778785 0.777183 0.7174603 0.8222222 0.784156 0.7630952 0.7743915 0.7280308 0.7222286 0.952381 0.76805607 0.7481845 0.6816463 0.7194414 0.7007027 0.6369615 0.777056 0.5047003 0.630194 0.7451482 0.7445665 0.8013411 0.7953114 0.8094084 0.803565 0 0.767730 0.7635253 -0.00170743 6 0.735284 0.670830 0.06445383 0.3456036 6.3212e-01 insignificant 1.00000 1.000000 insignificant 0.4541910 0.59453683 insignificant 1 1.00000 insignificant 0.01182483 0.695571 lowCoverage 1 lowCoverage 0.7674556 0.7755725 0.01133928 6 0.705871 0.8046487 -0.0987780 7.5397e-01 8.0565e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.5356e-01 9.8486e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0772274 2.6241e-01 lowCoverage 1.0000e+00 lowCoverage 0.7684524 0.784394 -4.7325e-02 6 0.764691 0.663065 0.1016264 9.9949e-01 4.3695e-02 weaklyHypometh 1.0000e+00 7.6658e-01 insignificant 9.6216e-01 1.6836e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.02673739 0.49097386 lowCoverage 1.000000 lowCoverage 0.7644483 0.7755725 0.01385087 6 0.689811 0.8046487 -0.11483777 7.0180e-01 4.9745e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.4743e-01 9.7525e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.5403e-02 3.4108e-01 lowCoverage 1.0000e+00 lowCoverage 0.7661077 0.784394 -0.04414768 6 0.696424 0.663065 0.0333590 9.6649e-01 6.7094e-02 insignificant 1.0000e+00 1.000000 insignificant 9.2923e-01 4.3370e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0385622 0.3477673 lowCoverage 1.00000 lowCoverage 0.7745399 0.786008 -0.0636807 6 0.7069730 0.773575 -0.06660224 9.9634e-01 4.3996e-02 weaklyHypometh 1.0000e+00 3.0135e-01 insignificant 9.9974e-01 7.1613e-03 weaklyHypometh 1.0000e+00 1.0755e-01 insignificant -0.1039648 1.6353e-01 insignificant 1.0000e+00 insignificant chr3 199351537 199352537 15616 ENSG00000221452 0.911587 182 7 0.8622719 252 9 0.7830157 166 7 0.8820222 184 7 0.882669 144 7 0.8143572 310 9 0.9514723 116 7 0.8917630 185 9 0.886937 97 7 0.9138469 131 7 0.847791 382 9 0.793210 38 2 0.8798293 254 7 0.9714286 24 3 0.8429903 204 7 0.8591837 34 3 0.746592 55 5 0.8679933 142 6 0.856406 254 7 0.8947989 265 8 0.660971 88 9 0.4753038 76 3 0.8747918 170 7 0.8939221 103 9 0.8214286 38 3 0.9310152 260 10 0.827584 99 7 0.891667 54 5 0.8754974 200 7 0.905469 306 9 0.886121 293 10 0.928219 422 9 0.4741437 225 7 0.5147625 187 7 0.461940 281 9 0.4484848 32 3 0.6314397 182 9 0.6200994 371 9 0.7739796 218 9 0.841715 291 9 0.8373186 123 7 0.8150140 108 6 0.829119 258 8 0.8715200 0.8522654 0.7437852 0.8320428 0.9049820 0.8632175 0.9132118 0.8321928 0.8487164 0.9257030 0.839597 0.720930 0.8297680 0.8615057 0.8484010 0.8089701 0.7234916 0.8499035 0.863531 0.841169 0.8214176 0.5645028 0.836920 0.8798251 0.9309121 0.9105268 0.7805753 0.901163 0.81295358 0.8726948 0.8470012 0.9097736 0.3639697 0.4554150 0.317333 0.4896285 0.675012 0.5016279 0.8014600 0.8301909 0.8354840 0.8036516 0.805512 3 0.850834 0.8833017 -0.01780044 9 0.809799 0.742538 0.06726085 0.9932662 1.1393e-01 insignificant 1.00000 1.000000 insignificant 0.7724524 0.40917012 insignificant 1 1.00000 insignificant 0.03600910 0.387594 insignificant 1 insignificant 0.8507463 0.4342723 0.41110184 9 0.792508 0.5566239 0.2358839 1.3573e-42 1.0000e+00 hypermethylated 9.6950e-41 1.0000e+00 hypermethylated 2.8146e-12 1.0000e+00 hypermethylated 1.8764e-10 1.0000e+00 hypermethylated 0.3418632 4.6740e-05 hypermethylated 1.9788e-03 hypermethylated 0.8507463 0.856713 1.1835e-02 9 0.792508 0.840889 -0.0483810 7.4809e-02 8.1737e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.6859e-03 7.5117e-01 weaklyHypermeth 1.9525e-01 1.00000000 insignificant 0.04757892 0.01604422 weaklyHypermeth 0.418374 insignificant 0.8841406 0.4342723 0.44225823 9 0.810041 0.5566239 0.25341754 7.0080e-28 1.0000e+00 hypermethylated 3.6884e-26 1.0000e+00 hypermethylated 1.8474e-11 1.0000e+00 hypermethylated 1.2316e-09 1.0000e+00 hypermethylated 3.0585e-01 2.2514e-05 hypermethylated 1.1849e-03 hypermethylated 0.8841406 0.856713 0.02681573 9 0.810041 0.840889 -0.0308474 1.7717e-02 9.7812e-01 weaklyHypermeth 3.5435e-01 1.000000 insignificant 3.2938e-03 9.1813e-01 weaklyHypermeth 1.3175e-01 1.000000 insignificant 0.0115698 0.7788257 insignificant 1.00000 insignificant 0.4342723 0.856713 -0.4030122 9 0.5566239 0.840889 -0.28426496 9.9987e-01 4.9439e-13 hypomethylated 1.0000e+00 2.0600e-11 hypomethylated 9.9891e-01 1.5105e-05 hypomethylated 1.0000e+00 5.7464e-04 hypomethylated -0.2942843 1.2360e-04 hypomethylated 8.2398e-03 hypomethylated chr4 670850 671850 15623 MYL5 ENSG00000215375 0.826194 453 14 0.6991667 538 15 0.7170180 530 14 0.8763174 514 14 0.686755 316 12 0.8429609 637 14 0.7441269 457 14 0.5697503 462 14 0.712762 569 14 0.8060546 591 15 0.787149 540 14 0.733376 341 13 0.5313323 571 14 0.7276560 344 12 0.7310037 586 14 0.8055861 323 11 0.542287 115 8 0.6740249 725 14 0.575161 649 14 0.7005235 527 14 0.767706 228 13 0.7322442 332 13 0.7507906 381 14 0.6966150 310 14 0.6923586 490 13 0.8524826 600 14 0.591049 526 14 0.643725 346 12 0.6452765 553 14 0.768540 725 14 0.777817 538 14 0.869273 636 14 0.0664491 574 14 0.0121951 448 14 0.228528 559 6 0.3156499 345 14 0.0798656 568 15 0.2991863 682 14 0.8547751 607 14 0.833911 524 14 0.8338446 441 11 0.6834640 584 14 0.852620 465 14 0.8161352 0.7285469 0.7076525 0.8652892 0.7860815 0.8603760 0.8458203 0.7654892 0.7926967 0.8683305 0.843518 0.817667 0.5077480 0.8126394 0.8300287 0.8535995 0.5306142 0.6069665 0.587356 0.812731 0.8734103 0.6850265 0.880560 0.7457363 0.7864530 0.8360125 0.7304725 0.746818 0.80290320 0.7898159 0.7326520 0.8820365 0.0424872 0.0077577 0.110085 0.1558904 0.034133 0.2516893 0.8109154 0.7996052 0.7903944 0.6925828 0.831675 11 0.758307 0.7858782 -0.02662218 14 0.621961 0.649349 -0.02738746 0.9442619 4.4763e-01 insignificant 1.00000 1.000000 insignificant 0.8937631 0.41910528 insignificant 1 1.00000 insignificant -0.01786287 0.588961 insignificant 1 insignificant 0.7583069 0.1398425 0.63128919 14 0.621961 0.1559033 0.4660578 2.6997e-85 1.0000e+00 hypermethylated 6.7493e-83 1.0000e+00 hypermethylated 8.0066e-28 1.0000e+00 hypermethylated 2.6689e-25 1.0000e+00 hypermethylated 0.5474813 3.5552e-05 hypermethylated 1.7776e-03 hypermethylated 0.7619831 0.785578 -2.7896e-02 14 0.752615 0.821764 -0.0691489 9.9602e-01 1.0685e-02 weaklyHypometh 1.0000e+00 3.4468e-01 insignificant 9.4081e-01 9.2385e-03 weaklyHypometh 1.0000e+00 0.40167299 insignificant -0.09726268 0.03724705 weaklyHypometh 0.642190 insignificant 0.7858782 0.1398425 0.65639789 14 0.649349 0.1559033 0.49344521 3.3493e-70 9.9994e-01 hypermethylated 1.1164e-67 1.0000e+00 hypermethylated 1.6042e-24 1.0000e+00 hypermethylated 5.3473e-22 1.0000e+00 hypermethylated 5.6534e-01 2.3839e-05 hypermethylated 1.1919e-03 hypermethylated 0.7898010 0.785578 -0.00117463 14 0.748338 0.821764 -0.0734259 9.1269e-01 3.4559e-01 insignificant 1.0000e+00 1.000000 insignificant 9.1267e-01 1.2926e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0793998 0.0817212 insignificant 1.00000 insignificant 0.1404120 0.785578 -0.6617570 14 0.1856489 0.821764 -0.63611475 1.0000e+00 1.7797e-52 hypomethylated 1.0000e+00 8.8985e-50 hypomethylated 1.0000e+00 1.0007e-17 hypomethylated 1.0000e+00 5.0033e-15 hypomethylated -0.6447440 6.4994e-06 hypomethylated 7.2216e-04 hypomethylated chr4 908420 909420 15627 CPLX1 ENSG00000168993 0.716033 314 6 0.6804042 270 6 0.6338207 257 6 0.7034639 290 7 0.703748 141 6 0.6889966 328 7 0.7005728 241 6 0.6603632 209 6 0.625385 232 6 0.7177886 234 6 0.628647 288 6 0.672097 201 6 0.6538266 272 7 0.6902174 50 1 0.6813516 263 6 0.6637682 134 6 0.398677 141 5 0.6342822 356 6 0.703974 207 6 0.6666699 251 7 0.524848 99 6 0.6155604 169 6 0.6662870 228 6 0.7542271 136 6 0.6757776 105 5 0.6338112 321 6 0.678526 252 5 0.768223 103 6 0.7818308 205 6 0.699280 354 6 0.609175 320 7 0.774644 304 7 0.6469263 183 5 0.4991703 159 5 0.695124 287 4 0.5666394 83 4 0.5304762 136 6 0.9338810 377 7 0.6719079 325 6 0.615704 308 6 0.6845321 302 6 0.6448121 373 6 0.637256 278 6 0.6918063 0.6967399 0.6168555 0.7349743 0.7008304 0.7480528 0.7848693 0.6669500 0.6072470 0.7321381 0.724983 0.646096 0.6633443 0.6958409 0.6920503 0.6417040 0.5343155 0.6420403 0.665361 0.735593 0.5580381 0.5279491 0.684313 0.7516168 0.6445821 0.7253917 0.6912482 0.787602 0.76527856 0.6732600 0.6496377 0.8037468 0.6419705 0.5280722 0.783464 0.6925311 0.585375 0.9293684 0.6951182 0.6193521 0.6900131 0.6268267 0.689745 5 0.688609 0.6976117 -0.01315443 6 0.654863 0.678518 -0.02365445 0.8968275 3.0127e-01 insignificant 1.00000 1.000000 insignificant 0.8425162 0.32864306 insignificant 1 1.00000 insignificant -0.02064474 0.460075 insignificant 1 insignificant 0.6886087 0.7600000 -0.05284366 6 0.654863 0.7513019 -0.0964388 9.2442e-01 1.3426e-05 weaklyHypometh 1.0000e+00 2.2377e-03 weaklyHypometh 6.0295e-01 3.6497e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 0.0158348 8.2085e-01 insignificant 1.0000e+00 insignificant 0.6886087 0.686633 2.0160e-02 6 0.654863 0.613684 0.0411796 1.0442e-01 6.2216e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.6224e-01 6.6122e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.01036207 0.60402922 insignificant 1.000000 insignificant 0.6976117 0.7600000 -0.03844928 6 0.678518 0.7513019 -0.07278431 8.3152e-01 1.6288e-03 weaklyHypometh 1.0000e+00 1.8098e-01 insignificant 6.7345e-01 5.8193e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 3.6480e-02 6.1429e-01 insignificant 1.0000e+00 insignificant 0.6976117 0.686633 0.03545511 6 0.678518 0.613684 0.0648340 4.8740e-02 7.0566e-01 weaklyHypermeth 8.1234e-01 1.000000 insignificant 1.4271e-01 5.8317e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0310068 0.2500035 insignificant 1.00000 insignificant 0.7600000 0.686633 0.0680040 6 0.7513019 0.613684 0.13761835 4.3902e-03 9.9593e-01 weaklyHypermeth 3.6585e-01 1.0000e+00 insignificant 3.3406e-01 9.1059e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0054728 9.3701e-01 insignificant 1.0000e+00 insignificant chr4 1017020 1018020 15629 FGFRL1 ENSG00000127418 0.842130 712 26 0.8204584 463 25 0.7895327 507 30 0.8793996 698 20 0.790304 401 20 0.8154933 676 32 0.6838704 386 18 0.8299322 544 26 0.786937 442 26 0.8603929 533 27 0.815420 759 29 0.686230 260 17 0.8353802 646 26 0.8523960 243 15 0.9151831 574 28 0.5448828 261 12 0.708664 1240 9 0.8143502 1060 26 0.875141 644 26 0.8183125 503 22 0.852105 316 24 0.7315006 313 18 0.8151284 469 25 0.7771727 281 23 0.8984953 355 18 0.9341591 645 29 0.745126 384 27 0.502423 165 11 0.8799127 600 28 0.857989 679 28 0.853862 673 28 0.843807 735 27 0.2663576 653 30 0.3226189 701 31 0.220635 425 19 0.4492112 310 16 0.2949303 504 28 0.6515936 662 28 0.7403998 491 23 0.729875 598 24 0.6501469 474 20 0.7685778 727 24 0.757786 489 25 0.8728327 0.8240141 0.7662673 0.9068907 0.8758322 0.8395582 0.8519916 0.8830590 0.7917258 0.9277368 0.863464 0.726363 0.8530850 0.8545200 0.8892885 0.7517710 0.8502846 0.7663043 0.867465 0.866198 0.8347636 0.6637025 0.889387 0.8774023 0.8201834 0.9147993 0.8399640 0.771534 0.85218058 0.9121531 0.8724134 0.9220981 0.0862912 0.1197030 0.145515 0.4321086 0.127291 0.3942011 0.7392411 0.6960668 0.6827107 0.7294104 0.578254 4 0.866949 0.8766928 -0.00964358 27 0.794833 0.775643 0.01918922 0.9529401 1.4458e-01 insignificant 1.00000 1.000000 insignificant 0.9909475 0.06941902 insignificant 1 1.00000 insignificant -0.00941960 0.806122 insignificant 1 insignificant 0.8670245 0.3199140 0.56664238 28 0.816315 0.3903567 0.4259580 2.9165e-144 1.0000e+00 hypermethylated 2.9165e-141 1.0000e+00 hypermethylated 4.1292e-38 1.0000e+00 hypermethylated 4.1292e-35 1.0000e+00 hypermethylated 0.4306628 7.6270e-04 hypermethylated 2.1644e-02 hypermethylated 0.8672275 0.710943 1.5306e-01 25 0.818157 0.710462 0.1076948 1.4301e-22 9.8471e-01 weaklyHypermeth 4.7671e-20 1.0000e+00 weaklyHypermeth 2.7986e-09 9.3042e-01 weaklyHypermeth 9.3287e-07 1.00000000 weaklyHypermeth 0.06886345 0.03182600 weaklyHypermeth 0.589370 insignificant 0.8767148 0.3198157 0.55373123 29 0.784415 0.3800842 0.40433126 6.2003e-145 1.0000e+00 hypermethylated 6.2003e-142 1.0000e+00 hypermethylated 8.5664e-35 1.0000e+00 hypermethylated 8.5664e-32 1.0000e+00 hypermethylated 4.4008e-01 3.6625e-04 hypermethylated 1.1099e-02 hypermethylated 0.8763402 0.710687 0.14065643 24 0.778589 0.691260 0.0873285 2.0622e-15 9.9997e-01 weaklyHypermeth 6.8740e-13 1.000000 weaklyHypermeth 2.1892e-07 9.9957e-01 weaklyHypermeth 1.0946e-04 1.000000 weaklyHypermeth 0.0782831 0.0621027 insignificant 1.00000 insignificant 0.3200123 0.710687 -0.4499454 25 0.3903567 0.691260 -0.30090359 1.0000e+00 5.5519e-32 hypomethylated 1.0000e+00 1.1104e-29 hypomethylated 1.0000e+00 1.1073e-16 hypomethylated 1.0000e+00 3.6909e-14 hypomethylated -0.3617993 1.8131e-03 weaklyHypometh 5.4943e-02 weaklyHypometh chr4 1024520 1025520 15631 FGFRL1 ENSG00000127418 0.754047 348 9 0.5671166 294 9 0.6076058 272 10 0.6709336 555 9 0.559236 239 9 0.7095760 559 11 0.6612433 394 12 0.6350055 315 9 0.583827 489 9 0.5527552 372 9 0.684494 314 12 0.659013 250 9 0.2696245 456 9 0.5955353 155 7 0.6098152 373 9 0.7851833 193 8 0.724937 200 6 0.6961518 547 9 0.394500 220 9 0.6236245 435 9 0.640146 122 10 0.4841931 328 10 0.6252781 352 9 0.4119925 172 11 0.7017250 191 9 0.5487580 323 9 0.584369 207 9 0.463930 154 9 0.6373282 328 9 0.561390 478 9 0.577220 388 9 0.727973 465 12 0.2380823 393 12 0.1856560 244 9 0.000000 55 2 0.3930646 106 8 0.2773057 170 8 0.6710690 426 9 0.4416737 602 9 0.588519 434 9 0.5200918 438 9 0.5260772 554 9 0.495586 529 9 0.6301606 0.5069943 0.5712900 0.6072407 0.4863464 0.6165553 0.5815399 0.6032933 0.5524693 0.5668406 0.715792 0.745668 0.2935241 0.5657533 0.5189604 0.6988093 0.6447678 0.5320899 0.474376 0.509018 0.6752692 0.3158482 0.558214 0.4826666 0.5404710 0.4940040 0.5213981 0.442614 0.59504024 0.3947173 0.5429331 0.7223161 0.2401054 0.1578436 NA 0.2936532 0.304658 0.6271946 0.3564213 0.4652444 0.4320170 0.4541090 0.406368 9 0.542264 0.4954390 0.04502065 9 0.607984 0.570839 0.03714526 0.1188288 9.6904e-01 insignificant 1.00000 1.000000 insignificant 0.0627812 0.94737771 insignificant 1 1.00000 insignificant 0.03685267 0.340623 insignificant 1 insignificant 0.5422636 0.3134864 0.20051938 9 0.607984 0.3432268 0.2647574 6.1170e-14 1.0000e+00 hypermethylated 1.4920e-12 1.0000e+00 hypermethylated 5.8409e-10 1.0000e+00 hypermethylated 2.1633e-08 1.0000e+00 hypermethylated 0.3230150 1.5502e-02 weaklyHypermeth 2.5003e-01 insignificant 0.5408787 0.383262 1.4181e-01 9 0.603424 0.552208 0.0512168 3.6057e-06 2.9154e-01 weaklyHypermeth 2.0031e-04 1.0000e+00 weaklyHypermeth 4.9243e-07 5.8349e-01 weaklyHypermeth 7.0347e-05 1.00000000 weaklyHypermeth 0.10282163 0.01116060 weaklyHypermeth 0.360019 insignificant 0.4954390 0.3134864 0.15270674 9 0.570839 0.3432268 0.22761216 3.2229e-09 9.9999e-01 weaklyHypermeth 6.4459e-08 1.0000e+00 weaklyHypermeth 9.8857e-07 1.0000e+00 weaklyHypermeth 2.8245e-05 1.0000e+00 weaklyHypermeth 2.8616e-01 2.5025e-02 weaklyHypermeth 3.2500e-01 insignificant 0.4931864 0.383262 0.09691096 9 0.559431 0.552208 0.0072231 1.2537e-02 5.1889e-01 weaklyHypermeth 2.7254e-01 1.000000 insignificant 7.5216e-03 6.1947e-01 weaklyHypermeth 2.3505e-01 1.000000 insignificant 0.0659690 0.0908212 insignificant 1.00000 insignificant 0.3159420 0.383262 -0.0412072 9 0.3918721 0.552208 -0.16033545 9.6061e-01 2.9568e-04 weaklyHypometh 1.0000e+00 4.6199e-03 weaklyHypometh 1.0000e+00 4.1341e-04 weaklyHypometh 1.0000e+00 9.8431e-03 weaklyHypometh -0.2201934 6.2127e-02 insignificant 6.2127e-01 insignificant chr4 1036920 1037920 15632 FGFRL1 ENSG00000127418 0.810148 869 16 0.7851726 805 16 0.6826707 765 16 0.7726640 672 15 0.799244 416 15 0.8340418 914 16 0.7850663 666 16 0.7961893 598 15 0.789787 672 16 0.8497200 582 16 0.852979 687 16 0.787806 415 16 0.3179902 800 16 NA 0 0 0.7119017 606 16 0.7456187 301 15 0.692289 395 16 0.7020930 851 15 0.813485 608 15 0.7770976 751 16 0.890174 292 15 0.6782523 282 14 0.8278750 692 16 0.8472317 318 16 0.8444614 220 12 0.7854317 996 16 0.766563 199 14 0.909318 338 15 0.7643022 690 16 0.671171 993 16 0.756644 880 16 0.888609 948 16 0.0412907 852 16 0.0403685 554 16 0.020014 414 13 0.3012999 184 14 0.1081713 289 14 0.3312497 1064 16 0.7452683 912 16 0.757629 860 16 0.7169605 734 14 0.7910089 995 16 0.770086 805 15 0.8395820 0.7842053 0.6942250 0.8101251 0.8295490 0.8451753 0.8038555 0.7956185 0.7835390 0.8369345 0.846738 0.792110 0.3110514 NA 0.6965623 0.7464551 0.6840166 0.7035484 0.808262 0.799683 0.8798636 0.6359619 0.831205 0.8828482 0.8201853 0.7658400 0.7652361 0.902846 0.76887761 0.6782033 0.7740530 0.8951316 0.0554504 0.0394086 0.064875 0.3303538 0.126448 0.3410611 0.7548406 0.7578067 0.7489106 0.7663046 0.757573 14 0.756243 0.7916180 -0.03773032 16 0.752521 0.790351 -0.03782972 0.9997286 1.2890e-02 weaklyHypometh 1.00000 0.716131 insignificant 0.9999718 0.00132570 weaklyHypometh 1 0.33143 insignificant -0.04955735 0.169391 insignificant 1 insignificant 0.7562434 0.1376229 0.61252205 16 0.752521 0.1501129 0.6024082 9.6949e-93 1.0000e+00 hypermethylated 3.2316e-90 1.0000e+00 hypermethylated 1.5417e-37 1.0000e+00 hypermethylated 7.7083e-35 1.0000e+00 hypermethylated 0.6125465 1.8848e-05 hypermethylated 1.0471e-03 hypermethylated 0.7562434 0.759405 -5.8920e-04 16 0.752521 0.761734 -0.0092130 7.9409e-01 6.6029e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.6988e-02 9.4392e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.00324508 0.91332357 insignificant 1.000000 insignificant 0.7916180 0.1376229 0.65059810 16 0.790351 0.1501129 0.64023788 6.2038e-94 1.0000e+00 hypermethylated 3.1019e-91 1.0000e+00 hypermethylated 3.4358e-32 1.0000e+00 hypermethylated 1.7179e-29 1.0000e+00 hypermethylated 6.6210e-01 1.8773e-05 hypermethylated 1.0430e-03 hypermethylated 0.7916180 0.759405 0.03388460 16 0.790351 0.761734 0.0286167 1.0070e-02 9.9467e-01 weaklyHypermeth 2.3579e-01 1.000000 insignificant 4.5361e-04 9.9998e-01 weaklyHypermeth 2.3874e-02 1.000000 weaklyHypermeth 0.0463123 0.0948620 insignificant 1.00000 insignificant 0.1376229 0.759405 -0.6118885 16 0.1501129 0.761734 -0.61162116 1.0000e+00 1.3819e-65 hypomethylated 1.0000e+00 1.3819e-62 hypomethylated 1.0000e+00 1.7324e-19 hypomethylated 1.0000e+00 1.7324e-16 hypomethylated -0.6157916 7.7148e-05 hypomethylated 6.4290e-03 hypomethylated chr4 1137820 1138820 15635 TMED11P ENSG00000215367 0.908273 381 4 0.5293651 79 5 0.7364103 82 5 0.8459870 255 4 0.905159 77 5 0.8658726 373 6 0.7034520 111 5 0.9016897 98 5 0.786813 63 2 0.8663102 67 2 0.849513 157 5 0.884615 43 4 0.5704545 63 5 0.9142157 41 2 0.7220497 96 2 0.8800000 27 3 NA 0 0 0.7124728 606 4 0.893647 154 5 0.8271662 227 6 0.819573 48 5 0.8890805 75 4 0.9248792 74 4 0.8112536 47 4 0.8335165 135 2 0.8762732 184 5 0.637424 78 4 0.927273 20 2 0.8286842 82 2 0.881182 173 10 0.914688 179 6 0.909063 361 6 0.3750000 66 2 0.0028571 155 4 0.131536 315 3 0.4997312 130 2 0.1767454 98 5 0.6340614 295 10 0.7586632 376 6 0.879322 340 6 0.8623523 408 5 0.8478458 592 4 0.826782 303 6 0.7939799 0.6838650 0.4591785 0.8475070 0.8965788 0.7638253 0.6391068 0.8281919 0.6043956 0.8629224 0.792646 0.849764 0.7525816 0.8381877 0.6866671 0.8213592 NA 0.7467418 0.848339 0.768975 0.8093519 0.8065227 0.841227 0.7724255 0.8309436 0.8656961 0.8101059 0.819947 0.82982882 0.8791887 0.8617718 0.8556549 0.2026699 0.0063800 0.155500 0.1565926 0.191356 0.2639677 0.7458713 0.7739882 0.7631046 0.8182481 0.660548 2 0.807551 0.8439059 -0.04147014 5 0.836475 0.833929 0.00254575 0.8327933 6.3721e-02 insignificant 1.00000 1.000000 insignificant 0.9687548 0.16974535 insignificant 1 1.00000 insignificant -0.04896197 0.172109 lowCoverage 1 lowCoverage 0.8078339 0.1786065 0.63858226 6 0.864253 0.2110190 0.6532335 6.1288e-36 1.0000e+00 hypermethylated 3.6052e-34 1.0000e+00 hypermethylated 1.3773e-10 1.0000e+00 hypermethylated 5.7387e-09 1.0000e+00 hypermethylated 0.5021237 2.9531e-03 lowCoverage 6.7116e-02 lowCoverage 0.8074223 0.791562 1.9214e-02 6 0.813114 0.819956 -0.0068416 1.9496e-03 6.3250e-01 weaklyHypermeth 5.9080e-02 1.0000e+00 weaklyHypermeth 7.0550e-03 7.9685e-01 weaklyHypermeth 2.6130e-01 1.00000000 insignificant -0.02954738 0.39086515 lowCoverage 1.000000 lowCoverage 0.8485891 0.1929991 0.67077113 5 0.895538 0.3171047 0.57843337 1.3521e-32 1.0000e+00 hypermethylated 9.6579e-31 1.0000e+00 hypermethylated 3.3740e-10 1.0000e+00 hypermethylated 1.8745e-08 1.0000e+00 hypermethylated 5.5109e-01 1.9952e-03 lowCoverage 4.4338e-02 lowCoverage 0.8481100 0.792967 0.06667539 5 0.865235 0.846465 0.0187698 1.9446e-04 8.4950e-01 weaklyHypermeth 7.2832e-03 1.000000 weaklyHypermeth 1.3826e-03 9.9655e-01 weaklyHypermeth 6.9130e-02 1.000000 weaklyHypermeth 0.0194146 0.5446362 lowCoverage 1.00000 lowCoverage 0.1931818 0.792864 -0.6056891 6 0.3488152 0.831112 -0.48229658 1.0000e+00 2.6941e-16 hypomethylated 1.0000e+00 1.4967e-14 hypomethylated 1.0000e+00 8.8257e-07 hypomethylated 1.0000e+00 4.9032e-05 hypomethylated -0.5316711 2.4623e-03 lowCoverage 7.0352e-02 lowCoverage chr4 1184920 1185920 15637 ENSG00000181877 0.844667 939 19 0.7734410 706 19 0.8261327 303 16 0.9077147 746 20 0.821636 275 16 0.8400170 1142 18 0.7786710 356 18 0.7399568 420 17 0.847905 248 15 0.9143151 184 12 0.811249 771 19 0.732493 89 12 0.8777748 229 11 0.8486304 195 13 0.9085201 234 15 0.7231944 100 8 1.000000 5 1 0.7813262 1055 20 0.905442 692 17 0.8981556 813 18 0.831126 174 15 0.7731254 110 10 0.8754315 297 16 0.8902953 155 12 0.7684791 356 14 0.8144208 776 18 0.805506 250 15 0.738131 98 8 0.8057786 495 18 0.868963 949 19 0.785762 928 20 0.915981 844 18 0.5643182 438 18 0.5131579 520 20 0.605919 614 17 0.5738203 132 7 0.5341033 408 19 0.5069053 833 18 0.8570624 931 18 0.878068 868 19 0.9000758 813 19 0.8921871 1102 12 0.835115 868 20 0.8369728 0.7303658 0.7334586 0.8608175 0.7886632 0.8298441 0.7734323 0.7987962 0.8203405 0.8522393 0.826562 0.727892 0.8282979 0.7790848 0.8291590 0.7071716 NA 0.7699573 0.829021 0.829449 0.8013236 0.7336155 0.809809 0.8170560 0.7929784 0.7768519 0.8100054 0.787749 0.75509923 0.7896646 0.7713859 0.8324990 0.6079804 0.5714822 0.639959 0.5698463 0.531381 0.4917983 0.7908373 0.8167541 0.8574086 0.8322279 0.827786 7 0.864062 0.8716627 -0.00459836 17 0.816436 0.816815 -0.00037874 0.7181217 6.1816e-01 insignificant 1.00000 1.000000 insignificant 0.4052262 0.90800425 insignificant 1 1.00000 insignificant 0.01631208 0.474410 insignificant 1 insignificant 0.8651948 0.4991511 0.36677512 17 0.835288 0.5488972 0.2863905 3.8787e-50 1.0000e+00 hypermethylated 3.5261e-48 1.0000e+00 hypermethylated 4.2632e-18 1.0000e+00 hypermethylated 6.0903e-16 1.0000e+00 hypermethylated 0.2893581 5.7659e-10 hypermethylated 6.4065e-08 hypermethylated 0.8648791 0.905936 -2.0166e-02 17 0.838409 0.878654 -0.0402455 8.5285e-01 5.2428e-03 weaklyHypometh 1.0000e+00 2.6214e-01 insignificant 8.1254e-01 1.5548e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.03343958 0.11035544 insignificant 1.000000 insignificant 0.8717617 0.4991511 0.36777976 18 0.815136 0.5488972 0.26623856 1.2682e-28 1.0000e+00 hypermethylated 7.0456e-27 1.0000e+00 hypermethylated 1.1900e-11 1.0000e+00 hypermethylated 8.5001e-10 1.0000e+00 hypermethylated 2.7305e-01 8.0545e-09 hypermethylated 1.2324e-06 hypermethylated 0.8718185 0.905936 -0.01433700 17 0.844833 0.878654 -0.0338213 9.8234e-01 7.2681e-03 weaklyHypometh 1.0000e+00 0.368776 insignificant 9.8376e-01 1.1859e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0497517 0.0241100 weaklyHypometh 0.77774 insignificant 0.4993202 0.905854 -0.3907843 17 0.5531492 0.868102 -0.31495304 1.0000e+00 3.5196e-17 hypomethylated 1.0000e+00 2.0704e-15 hypomethylated 1.0000e+00 3.8656e-10 hypomethylated 1.0000e+00 3.5142e-08 hypomethylated -0.3227977 6.8689e-08 hypomethylated 5.5817e-05 hypomethylated chr4 1749517 1750517 15644 ENSG00000218422 0.149159 323 9 0.1946545 419 10 0.1772509 426 10 0.2310127 343 6 0.099075 143 6 0.2268678 427 9 0.1214611 205 6 0.1262362 183 6 0.068760 370 6 0.0691974 357 6 0.335258 185 6 0.136822 164 6 0.0714309 263 6 0.1766828 184 6 0.1497682 245 6 0.1259673 186 6 0.198958 118 5 0.1751320 424 6 0.070014 236 7 0.1426094 380 10 0.231515 125 7 0.0129662 144 6 0.1019773 318 11 0.1217447 129 6 0.0856822 117 6 0.0424184 568 10 0.206689 265 7 0.160979 173 7 0.1253644 218 6 0.062533 540 10 0.048404 503 10 0.257508 292 11 0.1142217 382 10 0.2574061 168 6 0.307500 161 8 0.1512605 53 4 0.1307093 233 8 0.0658081 360 10 0.0743980 389 6 0.204278 339 6 0.0708859 282 6 0.0338136 382 6 0.085526 308 6 0.2368376 0.1139279 0.1934262 0.1412946 0.0990150 0.2269935 0.1414060 0.1371751 0.0748765 0.1079705 0.346457 0.178137 0.1074062 0.2177518 0.1225607 0.1144518 0.0829828 0.1706797 0.061558 0.129836 0.1908292 0.0279969 0.119201 0.1727777 0.1187638 0.1015347 0.1024144 0.213074 0.12381712 0.1134700 0.0831061 0.4625238 0.1651603 0.2579593 0.493779 0.1551820 0.173756 0.0991174 0.0618008 0.1518646 0.0619885 0.0782298 0.144986 6 0.151586 0.1255896 0.01016412 9 0.126966 0.095527 0.03143937 0.0073094 9.8622e-01 weaklyHypermeth 1.00000 1.000000 insignificant 0.1805376 0.99735142 insignificant 1 1.00000 insignificant 0.03083416 0.268625 insignificant 1 insignificant 0.1516129 0.1665438 -0.04273728 9 0.136035 0.1235090 0.0125261 8.3593e-03 4.6479e-01 inconclusive 6.2383e-02 1.0000e+00 inconclusive 1.0137e-01 4.2161e-01 insignificant 7.2928e-01 1.0000e+00 insignificant -0.0188350 6.5610e-01 insignificant 1.0000e+00 insignificant 0.1516401 0.117059 4.4884e-02 6 0.136035 0.127955 0.0080805 4.3473e-02 9.8759e-01 weaklyHypermeth 7.9041e-01 1.0000e+00 insignificant 9.7036e-03 9.9906e-01 weaklyHypermeth 2.9228e-01 1.00000000 insignificant 0.05853552 0.11990324 insignificant 1.000000 insignificant 0.1256637 0.1665438 -0.05062216 10 0.102350 0.1235090 -0.02115897 5.4627e-01 4.0629e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.6584e-01 3.3548e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -4.9669e-02 2.8795e-01 insignificant 1.0000e+00 insignificant 0.1258493 0.117059 0.04018384 6 0.102350 0.127955 -0.0256046 4.3876e-01 3.0508e-01 insignificant 1.0000e+00 1.000000 insignificant 7.1256e-02 9.6744e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0277014 0.4703712 insignificant 1.00000 insignificant 0.1670362 0.117128 0.0938160 6 0.1330097 0.137797 -0.00478755 3.7523e-01 7.0218e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.1569e-02 9.7847e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0773706 1.3817e-01 insignificant 1.0000e+00 insignificant chr4 1822517 1823517 15645 FGFR3 ENSG00000068078 0.874032 182 7 0.7555390 473 7 0.6114090 124 7 0.8519841 200 7 0.718231 106 8 0.9090740 333 7 0.7125496 89 7 0.8303519 215 8 0.899524 128 7 0.9023268 80 5 0.785169 359 8 0.933333 29 2 0.7885360 138 7 0.8617832 132 5 0.9101742 128 7 0.7976190 22 1 1.000000 2 0 0.7873538 178 7 0.896816 249 7 0.8054349 245 7 0.711623 99 8 0.3719298 47 2 0.9022269 206 7 0.8695874 148 7 0.6984127 28 2 0.8922923 404 7 0.772869 119 7 0.918667 66 4 0.9068281 293 7 0.879264 455 8 0.753698 459 8 0.918045 377 7 0.5652852 271 7 0.5800654 146 7 0.746641 249 8 0.6875000 12 0 0.6230838 202 7 0.7391021 401 8 0.7543465 211 7 0.712411 209 8 0.5485146 151 6 0.8498196 106 7 0.697434 178 8 0.8096588 0.7401540 0.6485671 0.8338947 0.6650812 0.8719489 0.7887873 0.8158085 0.8015389 0.9071376 0.873040 0.898780 0.7983151 0.8168874 0.8570501 0.9010929 NA 0.7418616 0.881802 0.816171 0.6950792 0.6414911 0.873523 0.8855860 0.8768976 0.8647111 0.8146955 0.909280 0.90135385 0.8316201 0.7430738 0.8948090 0.6917743 0.5206440 0.708125 0.7473134 0.726958 0.6279264 0.7181438 0.7042885 0.6677172 0.8035261 0.678423 2 0.821753 0.8478341 -0.02706512 7 0.721348 0.710407 0.01094155 0.9993400 2.0514e-01 insignificant 1.00000 1.000000 insignificant 0.9918790 0.46067011 insignificant 1 1.00000 insignificant 0.03194168 0.531238 insignificant 1 insignificant 0.8223723 0.7119438 0.13296394 7 0.825187 0.6632925 0.1618948 2.7505e-09 6.5837e-01 weaklyHypermeth 4.5090e-08 1.0000e+00 weaklyHypermeth 8.4447e-05 5.7120e-01 weaklyHypermeth 1.5354e-03 1.0000e+00 weaklyHypermeth 0.1746158 1.1924e-03 weaklyHypermeth 3.0478e-02 weaklyHypermeth 0.8217009 0.716959 1.0405e-01 7 0.693483 0.594832 0.0986514 1.9025e-04 9.9970e-01 weaklyHypermeth 7.9271e-03 1.0000e+00 weaklyHypermeth 6.2275e-04 1.0000e+00 weaklyHypermeth 4.1517e-02 1.00000000 weaklyHypermeth 0.11905689 0.06968946 insignificant 0.940589 insignificant 0.8484062 0.7119438 0.14413178 7 0.851809 0.6632925 0.18851685 3.3549e-08 9.3573e-01 weaklyHypermeth 6.0997e-07 1.0000e+00 weaklyHypermeth 6.5869e-04 8.4092e-01 weaklyHypermeth 1.0134e-02 1.0000e+00 weaklyHypermeth 1.4267e-01 2.1132e-02 weaklyHypermeth 2.9764e-01 insignificant 0.8481481 0.716959 0.13283397 7 0.781447 0.594832 0.1866157 5.6848e-06 1.0000e+00 weaklyHypermeth 2.9920e-04 1.000000 weaklyHypermeth 3.4198e-04 1.0000e+00 weaklyHypermeth 1.8999e-02 1.000000 weaklyHypermeth 0.0871152 0.2188178 insignificant 1.00000 insignificant 0.7119438 0.718640 -0.0518798 7 0.6632925 0.743540 -0.08024717 5.1997e-01 1.3131e-01 insignificant 1.0000e+00 7.7696e-01 insignificant 5.3138e-01 4.4392e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0555589 3.7345e-01 insignificant 1.0000e+00 insignificant chr4 1987817 1988817 15655 MIR943 ENSG00000185049 0.887135 475 9 0.8388484 266 9 0.7084594 165 9 0.8645099 304 9 0.845556 138 8 0.7428657 515 9 0.8464866 183 10 0.7423894 201 8 0.801351 157 9 0.6802542 165 8 0.875157 335 9 0.855429 129 8 0.7779384 249 9 0.8222222 20 2 0.9087326 222 9 0.7621144 83 8 0.746425 98 8 0.9484438 218 9 0.883486 251 9 0.8336094 510 9 0.618899 194 8 0.8402755 190 8 0.7599488 298 9 0.7405749 262 9 0.9201528 129 9 0.8982070 267 9 0.783432 318 7 0.678897 209 6 0.9240332 189 7 0.930105 286 9 0.856446 232 9 0.874937 606 9 0.7555761 233 8 0.6881579 160 9 0.880026 276 9 0.8489573 118 8 0.6938505 363 8 0.8176533 273 9 0.9427962 410 9 0.811536 463 9 0.8904460 331 9 0.8996574 448 9 0.889468 406 9 0.8817163 0.8108831 0.7814210 0.8265402 0.8723493 0.8036001 0.8394261 0.8324839 0.7937292 0.8473980 0.850376 0.833004 0.8501385 0.8452681 0.8839046 0.7260516 0.8095206 0.9372348 0.884361 0.874900 0.7545506 0.8590230 0.823393 0.7762883 0.8875530 0.8631524 0.7214769 0.741863 0.87234572 0.9294489 0.9323642 0.8547605 0.7082771 0.6456140 0.891794 0.8073427 0.691060 0.8079588 0.9087728 0.9116599 0.8821069 0.9156880 0.898523 7 0.858668 0.8065429 0.01811678 9 0.663027 0.723465 -0.06043832 0.3203069 9.2289e-02 insignificant 1.00000 1.000000 insignificant 0.9174434 0.01180001 inconclusive 1 0.65556 insignificant -0.00025491 0.994027 insignificant 1 insignificant 0.8596191 0.7371750 0.08853072 9 0.844541 0.7636552 0.0808855 1.0606e-05 9.9834e-01 weaklyHypermeth 1.2191e-04 1.0000e+00 weaklyHypermeth 5.9979e-03 9.8886e-01 weaklyHypermeth 6.8158e-02 1.0000e+00 weaklyHypermeth 0.0378671 3.3318e-01 insignificant 1.0000e+00 insignificant 0.8588512 0.918853 -5.7138e-02 9 0.710386 0.822292 -0.1119054 9.9998e-01 4.8593e-04 weaklyHypometh 1.0000e+00 5.3993e-02 weaklyHypometh 9.9997e-01 1.3741e-04 weaklyHypometh 1.0000e+00 0.02320935 weaklyHypometh -0.06821006 0.02956330 weaklyHypometh 0.557798 insignificant 0.8079596 0.7371750 0.06960160 9 0.851865 0.7636552 0.08820962 1.0368e-03 9.9942e-01 weaklyHypermeth 9.6897e-03 1.0000e+00 weaklyHypermeth 8.7182e-04 9.9989e-01 weaklyHypermeth 1.2821e-02 1.0000e+00 weaklyHypermeth 3.8122e-02 4.0556e-01 insignificant 1.0000e+00 insignificant 0.8069899 0.918853 -0.09024079 9 0.751332 0.822292 -0.0709596 7.4353e-01 4.1056e-03 weaklyHypometh 1.0000e+00 0.293258 insignificant 9.7113e-01 1.7617e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0679551 0.0820016 insignificant 1.00000 insignificant 0.7371750 0.919551 -0.1613861 9 0.7636552 0.901208 -0.13755306 1.0000e+00 2.5448e-06 weaklyHypometh 1.0000e+00 5.9181e-05 weaklyHypometh 9.9998e-01 1.3627e-03 weaklyHypometh 1.0000e+00 2.8994e-02 weaklyHypometh -0.1060772 2.6155e-02 weaklyHypometh 3.6838e-01 insignificant chr4 2238317 2239317 15656 ENSG00000215361 0.849289 349 8 0.5221538 159 9 0.6869945 249 9 0.8117709 305 8 0.776854 162 9 0.8023879 415 9 0.8287555 202 9 0.7941096 208 9 0.752545 253 9 0.8978269 200 9 0.754904 293 10 0.749693 130 8 0.7576068 203 9 0.8322891 157 5 0.8699392 210 8 0.7329837 114 6 0.584524 32 3 0.7134934 367 9 0.823978 335 9 0.7399690 365 8 0.739268 116 9 0.8095238 92 5 0.6272727 224 9 0.7890408 101 8 0.6904762 65 6 0.7734975 256 10 0.797814 195 9 0.843722 134 9 0.6806631 211 9 0.769380 210 10 0.744328 229 10 0.845922 444 9 0.6937620 192 9 0.7301463 353 9 0.653404 447 7 0.8296296 21 1 0.7259524 150 10 0.7200824 272 10 0.7322161 421 9 0.727662 295 9 0.7485095 228 8 0.7794022 508 9 0.657549 285 8 0.9409364 0.5240215 0.8304977 0.9076556 0.8738348 0.9144525 0.8125451 0.8094998 0.8525169 0.9218852 0.847951 0.807352 0.8777443 0.8957365 0.9231089 0.7596643 0.8640361 0.8676436 0.936074 0.884598 0.7400625 0.8274793 0.856269 0.8813898 0.9034303 0.9209825 0.8873610 0.887120 0.86735063 0.8666409 0.8806224 0.9385833 0.8252985 0.8929714 0.830170 0.9409586 0.801254 0.9284989 0.8936181 0.9047752 0.9015425 0.9103851 0.826328 5 0.847886 0.8571429 -0.02766810 9 0.755278 0.785702 -0.03042431 0.9988260 8.7212e-02 insignificant 1.00000 1.000000 insignificant 0.9931692 0.20068144 insignificant 1 1.00000 insignificant 0.00486096 0.862815 insignificant 1 insignificant 0.8478861 0.7749129 0.04600692 9 0.755278 0.6842627 0.0710148 1.7734e-03 6.0904e-01 weaklyHypermeth 1.5288e-02 1.0000e+00 weaklyHypermeth 4.7194e-01 3.2318e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0386073 2.3881e-01 insignificant 1.0000e+00 insignificant 0.8478861 0.897465 -2.1185e-02 8 0.755278 0.730676 0.0246019 1.2368e-01 2.0728e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.0644e-01 1.6980e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.03503570 0.23943320 insignificant 1.000000 insignificant 0.8571429 0.7749129 0.07727110 9 0.785702 0.6842627 0.10143915 1.3343e-03 9.1024e-01 weaklyHypermeth 1.2130e-02 1.0000e+00 weaklyHypermeth 4.0734e-01 8.1220e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.3746e-02 2.9364e-01 insignificant 1.0000e+00 insignificant 0.8568292 0.897524 0.00812344 8 0.759729 0.755160 0.0045693 2.0618e-01 6.9653e-01 insignificant 1.0000e+00 1.000000 insignificant 5.5460e-01 7.5680e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0301747 0.3000357 insignificant 1.00000 insignificant 0.7749129 0.897465 -0.0603043 8 0.6842627 0.730676 -0.04641292 7.6111e-01 1.0094e-01 insignificant 1.0000e+00 6.2310e-01 insignificant 5.7299e-01 7.0444e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0035716 9.1131e-01 insignificant 1.0000e+00 insignificant chr4 2373417 2374417 15663 ZFYVE28 ENSG00000159733 0.214375 126 5 0.1185897 60 3 0.1428571 29 3 0.1322209 182 9 0.250000 29 3 0.2322090 149 9 0.2428571 53 7 0.2444444 27 3 0.178571 26 1 0.2777778 17 2 0.148923 88 7 0.333333 16 2 0.2222222 12 1 0.2142857 15 1 0.5698864 30 3 0.0000000 3 0 NA 0 0 0.1820591 153 8 0.034750 105 5 0.0468320 97 5 0.209524 33 3 0.1111111 27 2 0.1818182 51 3 0.1054422 28 1 0.3833722 217 4 0.3428571 60 5 0.258837 64 3 0.200000 7 0 0.5144928 48 3 0.177083 103 6 0.136111 70 5 0.408796 116 7 0.0111111 63 7 0.0286378 69 3 0.500000 47 1 0.1804196 233 9 0.0055556 59 7 0.1275613 145 5 0.2507837 239 9 0.046918 140 6 0.0030303 164 5 0.1351351 92 3 0.135263 193 8 0.3645833 0.3162393 0.3333333 0.2947033 0.5833333 0.2530864 0.4333333 0.2444444 0.4166667 0.2222222 0.310450 0.677039 0.2222222 0.5000000 0.4265152 0.0103720 NA 0.3522063 0.127415 0.171717 0.4888889 0.1111111 0.333333 0.2460317 0.3334500 0.2857143 0.4372869 0.303125 0.51449275 0.0416667 0.0750000 0.7125000 0.0333333 0.0763674 NA 0.2424242 0.016667 0.0190476 0.2528736 0.1407543 0.0101010 0.2702703 0.234127 0 0.184298 0.2475610 -0.04596250 4 0.123765 0.296610 -0.17284543 0.9986902 3.3772e-02 lowCoverage 1.00000 1.000000 lowCoverage 0.9965430 0.60767436 lowCoverage 1 1.00000 lowCoverage -0.05318042 0.273198 lowCoverage 1 lowCoverage 0.1857380 0.0488599 0.13355120 4 0.185303 0.1020619 0.0832411 1.1654e-03 9.7184e-01 lowCoverage 1.0313e-02 1.0000e+00 lowCoverage 2.8680e-02 9.9861e-01 lowCoverage 2.5158e-01 1.0000e+00 lowCoverage 0.0570591 5.1199e-01 lowCoverage 1.0000e+00 lowCoverage 0.1862012 0.106280 8.2292e-02 4 0.218995 0.182908 0.0360861 2.8180e-03 9.9976e-01 lowCoverage 8.0514e-02 1.0000e+00 lowCoverage 1.7672e-01 9.8886e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 0.08504728 0.13596970 lowCoverage 1.000000 lowCoverage 0.2469438 0.0490196 0.19550986 4 0.279661 0.1105671 0.16909380 2.7415e-03 9.9989e-01 lowCoverage 2.3431e-02 1.0000e+00 lowCoverage 3.8621e-02 9.9947e-01 lowCoverage 3.0410e-01 1.0000e+00 lowCoverage 1.1024e-01 2.3762e-01 lowCoverage 1.0000e+00 lowCoverage 0.2463235 0.105200 0.13199246 4 0.235593 0.101199 0.1343938 6.9951e-03 1.0000e+00 lowCoverage 1.7488e-01 1.000000 lowCoverage 1.9363e-01 9.9981e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 0.1382277 0.0349124 lowCoverage 1.00000 lowCoverage 0.0490196 0.106280 -0.0425976 8 0.1206186 0.182908 -0.06228982 8.6181e-01 3.3230e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3658e-01 5.4803e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0279881 7.5935e-01 insignificant 1.0000e+00 insignificant chr4 2384017 2385017 15665 ZFYVE28 ENSG00000159733 0.223958 267 6 0.1867617 243 6 0.1919388 257 6 0.2091150 235 5 0.342996 184 6 0.3335777 425 7 0.2337662 202 6 0.3278246 299 6 0.270704 381 6 0.2192737 337 6 0.322748 232 6 0.323557 210 6 0.2650229 380 6 0.2862197 218 5 0.2680134 408 6 0.2142098 229 6 0.168341 173 6 0.2071480 323 6 0.316662 199 6 0.2951054 290 7 0.353265 108 6 0.3543470 136 5 0.3337302 177 6 0.3306283 157 6 0.1427083 109 5 0.2724456 309 7 0.290612 177 6 0.172748 98 6 0.2392412 191 6 0.150878 391 6 0.346022 329 6 0.363514 385 7 0.2343137 220 7 0.0664642 126 6 0.166667 239 5 0.0277778 44 5 0.1416617 178 6 0.1114543 291 6 0.2743595 295 6 0.327058 237 6 0.1743721 302 5 0.2098149 262 6 0.203996 328 6 0.2853574 0.1667619 0.2290387 0.2590245 0.2742718 0.3001927 0.2301818 0.2571066 0.2569338 0.2619105 0.265320 0.323853 0.2084017 0.2945369 0.1744014 0.2845692 0.1989611 0.2614398 0.245416 0.258349 0.2945354 0.2187481 0.263089 0.2882012 0.1713000 0.1812897 0.2002606 0.186033 0.30065393 0.1890277 0.3048680 0.3092966 0.1863451 0.0770607 0.000000 0.0306667 0.193152 0.0067423 0.3443494 0.2747908 0.2071706 0.2748701 0.257343 5 0.240168 0.2512661 0.00823917 6 0.285630 0.310535 -0.02490525 0.6208686 2.0392e-01 insignificant 1.00000 1.000000 insignificant 0.7082786 0.22866369 insignificant 1 1.00000 insignificant -0.01883116 0.497224 insignificant 1 insignificant 0.2401675 0.1020036 0.18926088 6 0.285630 0.1706077 0.1150224 1.6082e-11 9.9723e-01 weaklyHypermeth 3.5738e-10 1.0000e+00 weaklyHypermeth 1.6221e-07 9.9633e-01 weaklyHypermeth 4.5059e-06 1.0000e+00 weaklyHypermeth 0.1356241 4.4070e-03 weaklyHypermeth 8.6411e-02 weaklyHypermeth 0.2401675 0.247893 -1.2894e-02 6 0.285630 0.326044 -0.0404139 2.1337e-01 2.7657e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.4768e-01 1.1102e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.02242701 0.48861400 insignificant 1.000000 insignificant 0.2512661 0.1020036 0.17768938 6 0.310535 0.1706077 0.13992769 1.4537e-08 9.9999e-01 weaklyHypermeth 2.7956e-07 1.0000e+00 weaklyHypermeth 8.6236e-07 9.9998e-01 weaklyHypermeth 2.5363e-05 1.0000e+00 weaklyHypermeth 1.5446e-01 1.9093e-03 weaklyHypermeth 4.3393e-02 weaklyHypermeth 0.2512661 0.247893 -0.02624695 6 0.310535 0.326044 -0.0155086 5.4651e-01 2.0529e-01 insignificant 1.0000e+00 1.000000 insignificant 5.9208e-01 3.5376e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0412582 0.2858224 insignificant 1.00000 insignificant 0.1020036 0.247893 -0.2154423 6 0.1706077 0.326044 -0.15543631 1.0000e+00 7.2434e-06 hypomethylated 1.0000e+00 1.5747e-04 hypomethylated 1.0000e+00 4.0483e-04 hypomethylated 1.0000e+00 9.8431e-03 hypomethylated -0.1131971 2.1577e-02 weaklyHypometh 3.1731e-01 insignificant chr4 2384817 2385817 15666 ZFYVE28 ENSG00000159733 0.036934 225 8 0.1359562 211 8 0.1599504 293 8 0.0404040 233 8 0.038735 166 8 0.2326454 488 8 0.1267861 177 7 0.0580812 245 8 0.020018 389 9 0.0370751 484 9 0.052340 199 9 0.073664 339 9 0.0518210 405 9 0.0699611 229 8 0.1178108 466 9 0.0722639 295 9 0.030528 168 8 0.0215990 323 9 0.088877 175 9 0.1938374 420 8 0.163956 124 6 0.0564069 226 8 0.0802339 133 9 0.0647498 143 9 0.0758759 169 8 0.0395879 246 8 0.073704 198 8 0.080554 115 8 0.0435880 153 8 0.036430 270 7 0.074948 298 8 0.196822 469 8 0.0551580 187 9 0.0265310 115 9 0.277778 104 3 0.0046296 96 6 0.0304007 145 8 0.1257624 355 9 0.0628748 305 9 0.023569 237 9 0.0114511 277 8 0.0367044 273 9 0.049465 371 9 0.0415454 0.1767221 0.2304187 0.0299913 0.0343393 0.2485610 0.0935101 0.0698735 0.0273872 0.0427188 0.070746 0.063159 0.0460482 0.0731368 0.0257367 0.0858528 0.0398776 0.0322313 0.086061 0.257331 0.2094105 0.0443578 0.102741 0.1132941 0.0774425 0.0564141 0.0853995 0.104807 0.05032360 0.0552259 0.1105478 0.2592812 0.0890340 0.0352738 0.150892 0.0072874 0.045774 0.1873464 0.0506614 0.0333070 0.0185513 0.0295171 0.045483 7 0.115177 0.1226415 -0.00333827 8 0.137992 0.089093 0.04889974 0.5298200 6.9900e-01 insignificant 1.00000 1.000000 insignificant 0.6472019 0.17547042 insignificant 1 1.00000 insignificant 0.00072629 0.970499 insignificant 1 insignificant 0.1151771 0.1287425 0.00232418 8 0.137992 0.0739396 0.0640529 9.4752e-04 9.8088e-01 weaklyHypermeth 8.5362e-03 1.0000e+00 weaklyHypermeth 2.5904e-03 9.9053e-01 weaklyHypermeth 3.3641e-02 1.0000e+00 weaklyHypermeth -0.0037456 9.3482e-01 insignificant 1.0000e+00 insignificant 0.1150472 0.039645 7.1118e-02 9 0.097769 0.038199 0.0595704 1.5983e-02 8.0719e-01 weaklyHypermeth 3.2619e-01 1.0000e+00 insignificant 1.3330e-02 6.6951e-01 weaklyHypermeth 3.4180e-01 1.00000000 insignificant 0.04615136 0.00979548 weaklyHypermeth 0.332108 insignificant 0.1226415 0.1287425 0.00594990 8 0.089093 0.0739396 0.01515313 1.9992e-02 9.9644e-01 weaklyHypermeth 1.4079e-01 1.0000e+00 insignificant 1.3968e-02 9.9997e-01 weaklyHypermeth 1.3830e-01 1.0000e+00 insignificant -4.4719e-03 9.2258e-01 insignificant 1.0000e+00 insignificant 0.1228830 0.039645 0.09303573 8 0.098992 0.038199 0.0607929 1.0433e-02 6.1760e-01 weaklyHypermeth 2.3712e-01 1.000000 insignificant 1.5656e-03 5.8598e-01 weaklyHypermeth 7.4554e-02 1.000000 weaklyHypermeth 0.0454251 0.0164328 weaklyHypermeth 0.68470 insignificant 0.1288711 0.039645 0.0962322 8 0.0821551 0.038199 0.04395605 4.2075e-01 5.8189e-03 inconclusive 1.0000e+00 5.4382e-02 inconclusive 8.5204e-01 5.6125e-02 insignificant 1.0000e+00 4.6004e-01 insignificant 0.0498970 2.9235e-01 insignificant 1.0000e+00 insignificant chr4 2767643 2768643 15672 SH3BP2 ENSG00000087266 0.934611 158 4 0.8568276 143 6 0.8635697 116 6 0.8996711 165 6 0.946581 44 4 0.8911510 166 4 0.7750000 44 2 0.9625166 122 6 0.970988 85 5 0.9213790 81 6 0.890754 163 5 0.909524 25 2 0.8644819 113 4 0.9166667 16 1 0.9257850 79 3 1.0000000 4 0 0.733333 34 4 0.7530849 177 4 0.862897 94 4 0.9646402 144 3 0.835300 98 6 0.6879745 74 5 0.9160667 148 6 0.8452381 51 5 0.8684588 147 6 0.9127445 189 6 0.943158 156 6 0.937500 38 5 0.9194399 123 4 0.950544 187 6 0.934062 137 6 0.903282 201 6 0.3452044 119 6 0.3673401 115 6 0.042485 222 3 0.2244318 27 2 0.4545637 88 6 0.4857278 199 6 0.7280524 95 3 0.782018 206 6 0.8176695 146 4 0.8044082 142 4 0.717263 164 6 0.8941065 0.8453249 0.8318596 0.9231452 0.9221961 0.8681119 0.8683206 0.9336746 0.9363868 0.8764843 0.893739 0.798255 0.8607185 0.8193446 0.8675738 0.9647945 0.6944694 0.6969243 0.891004 0.918542 0.7632370 0.6230422 0.887564 0.9681934 0.8092658 0.8731672 0.9315746 0.856870 0.86180387 0.9060200 0.9139647 0.9250949 0.1491192 0.2303956 0.218163 0.2142532 0.704620 0.2183272 0.6191841 0.7083937 0.7291874 0.7052910 0.658812 2 0.870690 0.8843669 -0.00935177 4 0.897455 0.775346 0.12210951 0.9704342 2.4793e-01 lowCoverage 1.00000 1.000000 lowCoverage 0.7347707 0.54610922 lowCoverage 1 1.00000 lowCoverage 0.00435895 0.871066 lowCoverage 1 lowCoverage 0.8706240 0.2552356 0.59325488 4 0.880364 0.4056163 0.4747482 7.6542e-35 1.0000e+00 lowCoverage 4.0447e-33 1.0000e+00 lowCoverage 6.8864e-11 1.0000e+00 lowCoverage 3.1302e-09 1.0000e+00 lowCoverage 0.5722142 2.3867e-04 lowCoverage 8.8396e-03 lowCoverage 0.8706240 0.701195 1.6284e-01 4 0.880364 0.764652 0.1157123 7.3821e-09 9.7099e-01 lowCoverage 6.1517e-07 1.0000e+00 lowCoverage 4.4031e-06 9.8404e-01 lowCoverage 4.0028e-04 1.00000000 lowCoverage 0.12229092 0.00082546 lowCoverage 0.110773 lowCoverage 0.8850129 0.2549020 0.61293459 6 0.918203 0.3476711 0.57053176 5.3167e-27 1.0000e+00 hypermethylated 2.5318e-25 1.0000e+00 hypermethylated 1.3282e-09 1.0000e+00 hypermethylated 6.0373e-08 1.0000e+00 hypermethylated 5.6786e-01 1.8860e-04 lowCoverage 6.7069e-03 lowCoverage 0.8849386 0.701195 0.17409167 4 0.904570 0.764652 0.1399179 2.0992e-10 9.9870e-01 lowCoverage 2.9988e-08 1.000000 lowCoverage 2.3416e-05 9.8337e-01 lowCoverage 2.6146e-03 1.000000 lowCoverage 0.1179320 0.0015942 lowCoverage 0.39854 lowCoverage 0.2552356 0.701195 -0.4652826 4 0.4056163 0.764652 -0.35903584 9.9999e-01 2.3953e-12 lowCoverage 1.0000e+00 9.2127e-11 lowCoverage 1.0000e+00 1.6721e-05 lowCoverage 1.0000e+00 5.9719e-04 lowCoverage -0.4499233 7.1975e-04 lowCoverage 3.2716e-02 lowCoverage chr4 3408179 3409179 15682 RGS12 ENSG00000159788 0.832437 456 11 0.8844005 363 14 0.7508246 326 15 0.9600447 522 13 0.882558 200 12 0.9304156 513 12 0.8546586 222 15 0.9422184 237 13 0.842847 251 15 0.9344458 329 15 0.897198 427 15 0.955794 144 10 0.9102122 339 13 0.8679487 99 6 0.8809952 301 15 0.8772059 149 9 0.877194 82 9 0.7599913 767 13 0.945219 377 12 0.8743908 427 12 0.912196 173 12 0.7650942 130 8 0.8692758 375 13 0.9370161 163 10 0.9433396 127 9 0.8471529 433 16 0.876217 186 13 0.863482 173 12 0.8844139 384 15 0.951799 481 16 0.841405 389 15 0.939551 432 15 0.6708917 368 13 0.5989024 436 13 0.799403 284 7 0.7316239 76 7 0.6960028 288 13 0.6790903 413 16 0.9211894 339 12 0.860996 352 14 0.9181301 395 10 0.9057821 626 11 0.908916 372 15 0.9187078 0.8644776 0.7607861 0.9547181 0.8114677 0.8935550 0.9188405 0.9123215 0.9004522 0.9277976 0.889012 0.899166 0.9009362 0.9284019 0.8917179 0.9122212 0.9236495 0.8797234 0.901854 0.952158 0.8605617 0.8504516 0.930394 0.9053779 0.9029806 0.9107016 0.8685450 0.868682 0.88688527 0.9232535 0.8880533 0.9518643 0.6970011 0.5348288 0.795786 0.7884957 0.781405 0.7921666 0.9063950 0.9268995 0.8994292 0.9187202 0.901066 5 0.899617 0.9080093 -0.00816750 13 0.824730 0.879056 -0.05432663 0.9366143 2.7398e-01 insignificant 1.00000 1.000000 insignificant 0.6683374 0.69380403 insignificant 1 1.00000 insignificant -0.00286189 0.889106 insignificant 1 insignificant 0.8998924 0.6756032 0.19320710 13 0.869026 0.6540878 0.2149381 1.9640e-34 9.3583e-01 weaklyHypermeth 9.8201e-33 1.0000e+00 weaklyHypermeth 3.2673e-07 9.5156e-01 weaklyHypermeth 8.5980e-06 1.0000e+00 weaklyHypermeth 0.1870643 3.6140e-04 weaklyHypermeth 1.2462e-02 weaklyHypermeth 0.8995553 0.923704 -2.1434e-02 10 0.818480 0.869527 -0.0510473 9.7327e-01 3.4987e-02 weaklyHypometh 1.0000e+00 7.2890e-01 insignificant 9.6349e-01 1.3807e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.01995278 0.25231045 insignificant 1.000000 insignificant 0.9077684 0.6756032 0.21648728 13 0.857713 0.6540878 0.20362557 7.3835e-24 9.0202e-01 hypermethylated 3.0765e-22 1.0000e+00 hypermethylated 3.7918e-05 9.9012e-01 hypermethylated 8.4263e-04 1.0000e+00 hypermethylated 1.8993e-01 2.4926e-04 weaklyHypermeth 8.0406e-03 weaklyHypermeth 0.9078220 0.923594 -0.00811118 10 0.872691 0.862660 0.0100309 9.1191e-01 1.1338e-01 insignificant 1.0000e+00 1.000000 insignificant 8.5503e-01 2.0438e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0170909 0.3864028 insignificant 1.00000 insignificant 0.6756032 0.923598 -0.2034207 10 0.6540878 0.905326 -0.25123814 9.9990e-01 8.1992e-13 hypomethylated 1.0000e+00 3.2797e-11 hypomethylated 9.9991e-01 6.9392e-05 hypomethylated 1.0000e+00 2.1028e-03 hypomethylated -0.2070171 2.8187e-04 hypomethylated 1.5659e-02 hypomethylated chr4 3441579 3442579 15683 DOK7 ENSG00000175920 0.882149 233 8 0.7681624 121 8 0.7166667 46 4 0.8325182 266 8 0.968750 18 1 0.7442138 250 8 0.8133578 44 4 0.8607021 126 8 0.958333 40 3 0.9091667 70 8 0.835368 250 8 0.750000 26 3 0.8244381 196 8 0.9772727 68 8 0.8337607 55 5 0.4000000 9 0 0.583333 12 0 0.7088143 532 8 0.842422 174 8 0.7628425 277 8 0.894841 63 7 0.7823246 155 8 0.8446085 69 4 1.0000000 71 8 0.7763789 332 8 0.9228933 228 8 0.693518 92 7 0.600000 17 1 0.8985136 188 8 0.904777 222 8 0.889675 179 8 0.892497 196 8 0.6094374 106 7 0.5383735 210 8 0.657358 187 3 0.6968387 116 6 0.3143506 114 7 0.7450287 299 8 0.7870370 94 7 0.786380 186 8 0.7812398 138 8 0.7543245 87 8 0.743333 128 8 0.8921060 0.8582621 0.6956140 0.8148081 0.9210526 0.8375427 0.7507052 0.8392779 0.9327485 0.8940058 0.821441 0.716811 0.9013225 0.9585327 0.7874086 0.5067069 0.6912188 0.8300240 0.909908 0.856080 0.8499025 0.8585140 0.845503 1.0000000 0.9217869 0.9193767 0.8515432 0.567233 0.94475223 0.8938733 0.9262102 0.8781459 0.5967818 0.6686488 0.534308 0.8198086 0.650669 0.8301298 0.9005848 0.8617528 0.8233144 0.7045100 0.758889 2 0.835055 0.8767956 -0.04090251 8 0.777744 0.827745 -0.05000165 0.9891710 1.1022e-01 insignificant 1.00000 1.000000 insignificant 0.9865619 0.60950670 insignificant 1 1.00000 insignificant -0.04305536 0.335149 insignificant 1 insignificant 0.8353528 0.6443798 0.19968405 8 0.789648 0.4373243 0.3523241 4.2542e-12 1.0000e+00 weaklyHypermeth 9.6686e-11 1.0000e+00 weaklyHypermeth 3.8184e-05 1.0000e+00 weaklyHypermeth 7.6448e-04 1.0000e+00 weaklyHypermeth 0.2050492 2.0315e-02 weaklyHypermeth 3.0955e-01 insignificant 0.8360832 0.805687 4.3428e-02 8 0.843157 0.798923 0.0442335 6.3034e-02 9.9702e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.2083e-02 9.9978e-01 weaklyHypermeth 3.1797e-01 1.00000000 insignificant 0.02815075 0.37980451 insignificant 1.000000 insignificant 0.8771444 0.6456311 0.23692445 8 0.840703 0.5102117 0.33049118 3.4107e-12 1.0000e+00 hypermethylated 8.7455e-11 1.0000e+00 hypermethylated 2.0051e-05 1.0000e+00 hypermethylated 4.6631e-04 1.0000e+00 hypermethylated 2.4810e-01 8.4572e-03 weaklyHypermeth 1.5377e-01 insignificant 0.8777098 0.805687 0.08589649 8 0.880196 0.798923 0.0812731 2.1376e-03 9.9992e-01 weaklyHypermeth 6.3606e-02 1.000000 weaklyHypermeth 1.2208e-02 9.9997e-01 weaklyHypermeth 3.4879e-01 1.000000 insignificant 0.0712061 0.0521158 insignificant 1.00000 insignificant 0.6487280 0.805687 -0.1453415 8 0.5691712 0.798923 -0.22975214 9.9988e-01 5.3630e-03 weaklyHypometh 1.0000e+00 5.1567e-02 weaklyHypometh 9.9907e-01 3.2468e-02 weaklyHypometh 1.0000e+00 2.9250e-01 insignificant -0.1768984 3.7190e-02 weaklyHypometh 4.4807e-01 insignificant chr4 3455579 3456579 15684 DOK7 ENSG00000175920 0.826862 438 24 0.7169869 573 25 0.7053953 693 25 0.8978475 333 18 0.748591 274 14 0.9206357 472 21 0.6595885 434 22 0.7823121 487 21 0.806492 355 21 0.8170442 432 21 0.821239 721 22 0.837475 250 14 0.3294707 611 21 0.7737868 116 7 0.7903919 407 21 0.8447270 269 17 0.668914 241 15 0.7245639 356 17 0.523248 850 21 0.6041946 478 17 0.783837 327 19 0.7801587 145 13 0.8708350 384 25 0.8074541 310 18 0.9272727 148 10 0.8526339 630 25 0.838856 384 19 0.741023 169 12 0.8292160 500 20 0.689655 750 25 0.728396 661 25 0.873088 790 25 0.4701181 726 25 0.4412465 578 22 0.459806 538 19 0.5544218 128 17 0.2805839 431 21 0.8190076 572 25 0.8311967 352 19 0.880858 613 21 0.8360747 337 15 0.8196419 506 19 0.808460 322 19 0.8727284 0.7361312 0.7150166 0.9033108 0.8073183 0.9133783 0.6788411 0.8221160 0.7951510 0.9062060 0.873005 0.845926 0.3920698 0.8290640 0.8661076 0.9015206 0.7155314 0.7982223 0.597530 0.758356 0.8800797 0.8198394 0.855362 0.7984643 0.9288172 0.8869904 0.8185877 0.822735 0.84975309 0.7181763 0.7496204 0.8728763 0.4429134 0.4138100 0.539705 0.7054751 0.325219 0.8406652 0.8873799 0.8680317 0.8152239 0.8800229 0.842504 8 0.743543 0.8037707 -0.06383667 23 0.680985 0.776996 -0.09601111 0.9999985 7.6347e-05 weaklyHypometh 1.00000 0.043358 weaklyHypometh 0.9999952 0.00269973 weaklyHypometh 1 0.34945 insignificant -0.07021390 0.063829 insignificant 1 insignificant 0.7435431 0.5119408 0.20520534 23 0.680985 0.4796178 0.2013671 5.6468e-26 9.9995e-01 hypermethylated 2.0914e-24 1.0000e+00 hypermethylated 4.5607e-10 1.0000e+00 hypermethylated 1.7541e-08 1.0000e+00 hypermethylated 0.2357910 2.0737e-02 weaklyHypermeth 3.0955e-01 insignificant 0.7438233 0.855399 -1.0117e-01 19 0.716613 0.813126 -0.0965126 1.0000e+00 9.7012e-09 weaklyHypometh 1.0000e+00 4.8506e-06 weaklyHypometh 1.0000e+00 1.0231e-05 weaklyHypometh 1.0000e+00 0.00341018 weaklyHypometh -0.09525802 0.00835342 weaklyHypometh 0.298336 insignificant 0.8037707 0.5119408 0.27048511 24 0.776996 0.4796178 0.29737817 6.0341e-31 1.0000e+00 hypermethylated 3.7713e-29 1.0000e+00 hypermethylated 6.7573e-14 1.0000e+00 hypermethylated 6.7573e-12 1.0000e+00 hypermethylated 3.0600e-01 7.2632e-03 weaklyHypermeth 1.3450e-01 insignificant 0.8040046 0.855399 -0.04119179 19 0.785169 0.813126 -0.0279574 9.9704e-01 3.5098e-04 weaklyHypometh 1.0000e+00 0.070742 weaklyHypometh 9.8945e-01 2.8939e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.0250441 0.3009286 insignificant 1.00000 insignificant 0.5128032 0.855399 -0.3097785 19 0.5151451 0.813126 -0.29798088 1.0000e+00 2.5573e-20 hypomethylated 1.0000e+00 1.7048e-18 hypomethylated 1.0000e+00 4.3820e-12 hypomethylated 1.0000e+00 7.3033e-10 hypomethylated -0.3310490 5.6622e-03 weaklyHypometh 1.1555e-01 insignificant chr4 3585179 3586179 15688 ENSG00000216560 0.795708 418 9 0.8189657 609 14 0.7392276 456 13 0.8582150 429 11 0.828979 277 12 0.7624658 594 11 0.7438247 325 12 0.7944201 408 12 0.882497 295 11 0.8083357 325 11 0.871585 591 12 0.742274 176 9 0.7398865 371 11 0.8999116 184 9 0.8326628 445 11 0.7639725 189 12 0.574892 36 3 0.6811777 556 11 0.765371 517 11 0.7483517 406 13 0.764876 187 12 0.4878517 264 9 0.7818854 382 13 0.7224539 289 12 0.8310706 217 10 0.7475474 596 14 0.793807 334 11 0.605339 234 12 0.6796761 455 11 0.835118 592 14 0.794730 641 14 0.870966 552 11 0.4139817 457 13 0.2233447 369 11 0.438727 463 12 0.2662238 85 6 0.2901008 417 12 0.5487690 578 13 0.5525084 448 11 0.543924 461 12 0.8009783 418 9 0.6531892 405 10 0.571003 417 13 0.8304555 0.7709723 0.7749423 0.8800982 0.8490871 0.8803445 0.8660400 0.8244932 0.8530468 0.9060220 0.911035 0.871629 0.8250317 0.8570228 0.8409365 0.8308060 0.5929805 0.6597740 0.845877 0.825949 0.8743359 0.5524174 0.831431 0.8540840 0.8612907 0.8397238 0.7844543 0.860783 0.80303063 0.8712365 0.7028645 0.9254936 0.3224581 0.2808624 0.324669 0.2548589 0.324550 0.4434801 0.6589290 0.6680244 0.7680665 0.6441278 0.564690 9 0.830682 0.8125659 0.01263389 11 0.782100 0.687280 0.09481908 0.2219208 9.6164e-01 insignificant 1.00000 1.000000 insignificant 0.3156643 0.97008115 insignificant 1 1.00000 insignificant 0.03969280 0.277462 insignificant 1 insignificant 0.8306155 0.3516252 0.48197124 11 0.770631 0.3390538 0.4315773 4.3151e-64 1.0000e+00 hypermethylated 7.1919e-62 1.0000e+00 hypermethylated 3.2926e-17 1.0000e+00 hypermethylated 4.1157e-15 1.0000e+00 hypermethylated 0.4191117 2.0185e-04 hypermethylated 7.7636e-03 hypermethylated 0.8308765 0.663099 1.6681e-01 11 0.787764 0.557241 0.2305231 8.2059e-22 1.0000e+00 weaklyHypermeth 2.0515e-19 1.0000e+00 weaklyHypermeth 1.1069e-08 1.0000e+00 weaklyHypermeth 2.7674e-06 1.00000000 weaklyHypermeth 0.15831561 0.02674880 weaklyHypermeth 0.528928 insignificant 0.8128692 0.3516252 0.47316761 11 0.705909 0.3390538 0.36685544 6.8695e-40 1.0000e+00 hypermethylated 6.2450e-38 1.0000e+00 hypermethylated 6.2472e-17 1.0000e+00 hypermethylated 1.2494e-14 1.0000e+00 hypermethylated 3.7942e-01 1.3364e-04 hypermethylated 5.1401e-03 hypermethylated 0.8134770 0.663099 0.15863258 11 0.744840 0.557241 0.1875987 3.4159e-11 1.0000e+00 weaklyHypermeth 6.8318e-09 1.000000 weaklyHypermeth 3.0895e-06 1.0000e+00 weaklyHypermeth 6.1790e-04 1.000000 weaklyHypermeth 0.1186228 0.0747284 insignificant 1.00000 insignificant 0.3519223 0.663099 -0.3077420 11 0.3789425 0.557241 -0.17829854 9.9888e-01 2.7939e-11 hypomethylated 1.0000e+00 9.9782e-10 hypomethylated 1.0000e+00 1.5785e-06 hypomethylated 1.0000e+00 7.8926e-05 hypomethylated -0.2607961 4.7408e-03 weaklyHypometh 1.0306e-01 insignificant chr4 3611179 3612179 15689 ENSG00000216560 0.885098 249 7 0.7678246 99 5 0.7312771 80 4 0.9241931 249 7 0.928422 60 4 0.8824143 193 5 0.7963962 67 4 0.9016580 60 4 0.808571 64 4 0.9290373 55 4 0.888068 111 5 0.686667 33 4 0.8365591 82 4 NA 0 0 0.8315476 72 4 0.9722222 22 2 0.989550 588 2 0.6883598 235 6 0.809091 35 2 0.7913351 178 5 0.784762 28 4 0.4862637 90 4 0.8192259 149 4 0.7258990 64 4 0.9309630 57 2 0.8331899 140 4 0.865202 102 4 0.870842 50 4 0.8687500 73 4 0.881512 122 5 0.889436 140 5 0.922086 200 4 0.7241007 96 5 0.6553047 87 3 0.464444 154 4 0.4166667 27 2 0.9156875 74 5 0.4454568 138 5 0.6564362 260 5 0.839210 258 5 0.6580743 282 4 0.7479114 317 6 0.832954 322 7 0.8631088 0.7602002 0.8017800 0.9052626 0.9247317 0.8919399 0.7600894 0.9006311 0.7770629 0.8951809 0.895420 0.831702 0.7676016 NA 0.8673327 0.9564880 0.9831618 0.7966367 0.787031 0.752114 0.8745921 0.6318041 0.847240 0.7896390 0.8518726 0.8628059 0.8342161 0.871103 0.87732268 0.8279323 0.8315046 0.8933598 0.7230135 0.6384723 0.284693 0.7226107 0.926185 0.4117787 0.7826963 0.7628075 0.7249203 0.7858852 0.835369 2 0.871007 0.8311367 0.03444687 5 0.767430 0.886987 -0.11955776 0.3790843 9.7798e-01 insignificant 1.00000 1.000000 insignificant 0.7311713 0.89000204 insignificant 1 1.00000 insignificant 0.02146932 0.600824 lowCoverage 1 lowCoverage 0.8713642 0.5885417 0.29075026 5 0.877063 0.7243063 0.1527562 8.8810e-07 9.9467e-01 hypermethylated 1.1534e-05 1.0000e+00 hypermethylated 1.4574e-02 9.9933e-01 weaklyHypermeth 1.4574e-01 1.0000e+00 insignificant 0.2410368 2.9025e-02 lowCoverage 3.6705e-01 lowCoverage 0.8711462 0.806810 7.5991e-02 5 0.873543 0.813229 0.0603134 1.4562e-03 9.9427e-01 weaklyHypermeth 5.0213e-02 1.0000e+00 weaklyHypermeth 3.1029e-02 9.9755e-01 weaklyHypermeth 6.7454e-01 1.00000000 insignificant 0.09772977 0.07054415 lowCoverage 0.940589 lowCoverage 0.8309975 0.5885417 0.24002251 5 0.870843 0.7243063 0.14653653 3.2058e-04 9.9971e-01 hypermethylated 3.4105e-03 1.0000e+00 hypermethylated 3.7732e-02 9.9999e-01 weaklyHypermeth 2.9946e-01 1.0000e+00 insignificant 2.1957e-01 4.0905e-02 lowCoverage 4.7017e-01 lowCoverage 0.8309975 0.805701 0.04558141 5 0.870843 0.811079 0.0597636 6.2511e-02 9.9123e-01 insignificant 9.9224e-01 1.000000 insignificant 8.4645e-02 9.8725e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0762605 0.1802611 lowCoverage 1.00000 lowCoverage 0.5885417 0.805701 -0.2183662 5 0.7243063 0.811079 -0.08677290 9.5857e-01 1.7815e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9313e-01 5.3674e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.1433071 1.5320e-01 lowCoverage 1.0000e+00 lowCoverage chr4 3616779 3617779 15690 ENSG00000216560 0.932143 107 5 0.9505495 63 5 0.8809524 67 5 0.8890281 149 5 0.687500 9 0 0.9009317 163 5 0.8541667 32 3 0.9372024 101 5 0.650988 82 5 0.9216667 80 5 0.899131 176 6 0.900000 21 2 0.9494381 209 5 0.9785628 114 5 0.9500000 43 5 1.0000000 7 0 1.000000 3 0 0.8623041 208 5 0.817532 79 5 0.9520002 109 5 0.889116 44 5 0.9377090 91 5 0.7301587 74 5 0.9750000 63 5 0.9482353 82 5 0.9282787 162 5 0.854985 87 5 0.678571 32 3 0.9058230 83 5 0.932154 139 5 0.969907 104 5 0.937059 138 6 0.2866659 108 5 0.2364379 93 5 0.329240 251 5 0.5000000 3 0 0.3899447 80 5 0.8497475 121 5 0.8048718 42 5 0.937566 119 5 0.8924837 73 5 0.8239927 66 5 0.719530 99 5 0.9334416 0.9401848 0.8488907 0.8637978 0.7076204 0.8768065 0.8053977 0.9221794 0.7753219 0.9190341 0.898412 0.897727 0.9471349 0.9757082 0.9431818 0.9882473 0.9409936 0.8633994 0.813914 0.942890 0.8485931 0.9335421 0.872159 0.9659091 0.9538770 0.9116271 0.8557686 0.721591 0.90506570 0.9129378 0.9465488 0.9239110 0.3260388 0.2756350 0.305323 0.4030634 0.456705 0.9144284 0.7898164 0.9218975 0.8906900 0.8127914 0.850431 0 0.896817 0.9092576 -0.01134714 5 0.899196 0.910977 -0.01178143 0.8823230 2.7934e-01 insignificant 1.00000 1.000000 insignificant 0.6793133 0.39280218 insignificant 1 1.00000 insignificant 0.00512183 0.880949 lowCoverage 1 lowCoverage 0.8968167 0.4710366 0.43475169 5 0.899196 0.4262646 0.4729312 5.9275e-24 9.9998e-01 hypermethylated 2.0440e-22 1.0000e+00 hypermethylated 3.0169e-08 9.9999e-01 hypermethylated 9.1421e-07 1.0000e+00 hypermethylated 0.4636989 3.2877e-03 lowCoverage 6.9951e-02 lowCoverage 0.8968167 0.864662 3.3976e-02 5 0.899196 0.814233 0.0849626 4.9247e-02 4.2170e-01 weaklyHypermeth 8.4908e-01 1.0000e+00 insignificant 1.3045e-01 6.2595e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.06001604 0.20521925 lowCoverage 1.000000 lowCoverage 0.9092576 0.4710366 0.45699284 5 0.910977 0.4262646 0.48471260 1.7901e-16 9.9999e-01 hypermethylated 5.2650e-15 1.0000e+00 hypermethylated 1.5609e-06 9.9993e-01 hypermethylated 4.2188e-05 1.0000e+00 hypermethylated 4.5858e-01 3.1229e-03 lowCoverage 6.5061e-02 lowCoverage 0.9092576 0.864662 0.04522831 5 0.910977 0.814233 0.0967441 6.3554e-02 5.1531e-01 insignificant 9.9303e-01 1.000000 insignificant 8.4606e-02 5.0444e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0548942 0.2678296 lowCoverage 1.00000 lowCoverage 0.4710366 0.864662 -0.4017371 5 0.4262646 0.814233 -0.38796854 9.9860e-01 3.4117e-06 hypomethylated 1.0000e+00 7.7539e-05 hypomethylated 9.9857e-01 1.4225e-03 weaklyHypometh 1.0000e+00 2.9636e-02 weaklyHypometh -0.4036829 5.2988e-03 lowCoverage 1.1039e-01 lowCoverage chr4 3622879 3623879 15691 ENSG00000216560 0.953462 300 5 0.8595207 346 8 0.8375731 151 6 0.8651378 280 5 0.815939 117 7 0.9613786 441 9 0.7774411 95 5 0.9342606 212 8 0.877542 132 5 0.9573894 108 5 0.896231 340 9 0.626389 48 3 0.8430034 200 5 0.9337302 79 4 0.7494444 78 4 0.9666667 37 3 0.665349 502 2 0.7759318 317 6 0.967482 234 6 0.8986921 265 5 0.915432 55 4 0.8839092 112 5 0.9282738 176 5 0.7817715 154 5 0.7944188 103 6 0.8960921 270 7 0.646668 102 4 0.543349 90 4 0.7890909 147 4 0.835611 244 5 0.892888 176 6 0.843549 293 6 0.8126057 232 9 0.5697724 78 5 0.803354 218 5 0.2000000 5 1 0.7846954 276 8 0.5211673 312 4 0.9024005 176 6 0.901041 188 6 0.9285579 155 4 0.8288717 181 4 0.892065 199 6 0.9200591 0.8598348 0.7985207 0.9121540 0.9078680 0.9327275 0.9120455 0.8873294 0.8714610 0.9351785 0.908173 0.808283 0.9263858 0.9499892 0.9732449 1.0000000 0.8954006 0.9186218 0.935319 0.934978 0.9016162 0.8812158 0.946135 0.9364486 0.9410390 0.8980301 0.8670302 0.933810 0.96826446 0.9267487 0.8615618 0.9392972 0.7831597 0.7394266 0.666519 0.4190764 0.839467 0.2404994 0.9394332 0.9212967 0.9451168 0.8534115 0.869024 2 0.909367 0.9072917 0.00085327 5 0.911610 0.772546 0.13906384 0.1551510 9.6807e-01 insignificant 1.00000 1.000000 insignificant 0.4129736 0.98198897 insignificant 1 1.00000 insignificant 0.04554048 0.267400 insignificant 1 insignificant 0.9092398 0.6485281 0.26945626 5 0.834378 0.7045183 0.1298600 1.2969e-09 9.9881e-01 hypermethylated 2.2360e-08 1.0000e+00 hypermethylated 6.6172e-04 9.7166e-01 hypermethylated 1.0026e-02 1.0000e+00 hypermethylated 0.2428624 5.5106e-02 insignificant 6.0556e-01 insignificant 0.9090465 0.890990 1.5469e-02 5 0.895895 0.906963 -0.0110680 5.5111e-01 8.0062e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.3465e-01 8.3555e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.03245898 0.25586101 insignificant 1.000000 insignificant 0.9090434 0.6482143 0.26019951 5 0.846877 0.6776563 0.16922056 2.4330e-06 9.6782e-01 hypermethylated 3.3792e-05 1.0000e+00 hypermethylated 1.8697e-03 9.3419e-01 weaklyHypermeth 2.5968e-02 1.0000e+00 weaklyHypermeth 1.9732e-01 1.0296e-01 insignificant 8.5092e-01 insignificant 0.9115572 0.890990 0.02270831 5 0.888536 0.906963 -0.0184273 1.5664e-01 8.6650e-01 insignificant 1.0000e+00 1.000000 insignificant 4.9528e-01 8.5586e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0779995 0.0534773 insignificant 1.00000 insignificant 0.6375465 0.890990 -0.2721646 5 0.6936822 0.906963 -0.21328093 9.9997e-01 4.6580e-03 weaklyHypometh 1.0000e+00 4.5924e-02 weaklyHypometh 9.9576e-01 3.1566e-02 weaklyHypometh 1.0000e+00 2.9227e-01 insignificant -0.2753214 3.6702e-02 weaklyHypometh 4.4807e-01 insignificant chr4 3629779 3630779 15692 ENSG00000216560 0.806099 202 6 0.7073933 136 6 0.8050097 117 6 0.8785759 177 6 0.810185 46 6 0.8617127 209 6 0.8709933 124 6 0.7251401 107 6 0.830937 129 6 0.8338314 87 6 0.868227 142 6 0.829568 111 6 0.7821606 120 6 NA 0 0 0.8185768 70 6 0.6814404 79 4 0.734127 60 6 0.7876482 182 4 0.816865 112 6 0.7992625 159 6 0.789855 80 6 0.8157243 109 4 0.8350383 187 6 0.7379420 91 6 0.9385522 80 4 0.8587496 158 6 0.790460 108 6 0.760719 67 6 0.8308201 103 6 0.811949 159 6 0.825128 139 6 0.811505 240 6 0.1706261 146 6 0.1474930 150 6 0.000000 136 2 0.1195124 82 6 0.3750000 64 6 0.1224185 132 6 0.8010803 233 6 0.806421 269 6 0.8719185 135 6 0.7939651 212 6 0.693344 184 6 0.8280551 0.7010379 0.8116724 0.8725613 0.7931548 0.8511188 0.8785345 0.7588410 0.8123099 0.8427904 0.879148 0.815640 0.7815046 NA 0.8324290 0.7588023 0.7535077 0.7450752 0.828391 0.799587 0.7554060 0.7780729 0.868317 0.7856051 0.9228220 0.8717144 0.7781806 0.766363 0.84245677 0.8105213 0.8276427 0.8153087 0.1703337 0.1563943 0.146683 0.1296431 0.373140 0.1202342 0.8031436 0.8098555 0.8533710 0.7820153 0.689729 4 0.801182 0.8178830 -0.01676764 6 0.801816 0.816300 -0.01448400 0.6374058 1.8460e-01 insignificant 1.00000 1.000000 insignificant 0.7162916 0.26372097 insignificant 1 1.00000 insignificant -0.01469025 0.456317 insignificant 1 insignificant 0.8011819 0.1478873 0.64283503 6 0.801816 0.1501557 0.6516604 1.9771e-57 1.0000e+00 hypermethylated 2.1968e-55 1.0000e+00 hypermethylated 1.5643e-14 1.0000e+00 hypermethylated 1.3035e-12 1.0000e+00 hypermethylated 0.6466717 2.3888e-05 hypermethylated 1.2572e-03 hypermethylated 0.8011819 0.770571 1.9162e-02 6 0.801816 0.791116 0.0107003 2.9801e-01 6.9898e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.4210e-01 8.0106e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.00916747 0.78052805 insignificant 1.000000 insignificant 0.8178830 0.1478873 0.65629664 6 0.816300 0.1501557 0.66614440 4.6341e-42 1.0000e+00 hypermethylated 5.7926e-40 1.0000e+00 hypermethylated 4.9013e-13 1.0000e+00 hypermethylated 3.7702e-11 1.0000e+00 hypermethylated 6.6136e-01 1.7355e-05 hypermethylated 1.0209e-03 hypermethylated 0.8178830 0.770571 0.03653032 6 0.816300 0.791116 0.0251843 1.1603e-01 6.0906e-01 insignificant 1.0000e+00 1.000000 insignificant 2.0891e-01 7.9031e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0238577 0.4850219 insignificant 1.00000 insignificant 0.1478873 0.770571 -0.6299110 6 0.1501557 0.791116 -0.64096011 1.0000e+00 2.9640e-25 hypomethylated 1.0000e+00 2.9640e-23 hypomethylated 1.0000e+00 3.9366e-09 hypomethylated 1.0000e+00 3.2805e-07 hypomethylated -0.6375042 4.9829e-06 hypomethylated 6.2286e-04 hypomethylated chr4 4379679 4380679 15700 ZNF509 ENSG00000168826 0.416037 450 12 0.2528671 524 12 0.4080277 521 12 0.3260542 419 12 0.372003 381 10 0.5161769 779 12 0.4035041 505 12 0.3885658 502 12 0.275542 499 12 0.4122234 621 10 0.402973 589 12 0.414368 411 10 0.3321655 523 10 0.3154318 445 9 0.3380861 764 12 0.2654855 468 10 0.381373 80 6 0.3568545 628 12 0.252478 596 12 0.3167590 610 12 0.450598 203 10 0.3906833 268 9 0.3734254 353 11 0.3797196 322 12 0.3746651 204 9 0.3082859 773 12 0.354218 619 12 0.279438 310 12 0.5359124 436 12 0.262041 857 12 0.363205 686 12 0.455596 645 12 0.3002616 453 12 0.3372204 315 12 0.295961 615 11 0.3867254 129 8 0.2829050 454 12 0.4020973 612 12 0.4094583 652 12 0.439123 474 12 0.4355250 401 12 0.3885798 429 10 0.451970 503 12 0.4139891 0.2241876 0.4936521 0.3012796 0.3865859 0.4111272 0.3686046 0.3737288 0.2675929 0.4289513 0.413749 0.444537 0.2439061 0.3716644 0.3378307 0.3078283 0.3324449 0.3926922 0.212891 0.252362 0.4446357 0.3342135 0.316318 0.3418328 0.3588859 0.3071010 0.3022459 0.281857 0.43901453 0.2541983 0.3192220 0.4861263 0.2646145 0.2952914 0.252964 0.3524088 0.324967 0.3727633 0.4064264 0.4502754 0.3473972 0.3291071 0.450969 10 0.338084 0.3144820 0.01316723 12 0.337706 0.409262 -0.07155520 0.6042477 6.2808e-01 insignificant 1.00000 1.000000 insignificant 0.8229097 0.64953397 insignificant 1 1.00000 insignificant -0.01996696 0.465172 insignificant 1 insignificant 0.3381169 0.2994569 0.03520677 12 0.360220 0.3494310 0.0107891 3.2928e-04 6.8896e-01 weaklyHypermeth 3.1969e-03 1.0000e+00 weaklyHypermeth 1.7089e-02 9.7564e-01 weaklyHypermeth 1.6276e-01 1.0000e+00 insignificant 0.0231536 3.8218e-01 insignificant 1.0000e+00 insignificant 0.3382795 0.421309 -5.2394e-02 12 0.426887 0.411991 0.0148953 9.9968e-01 4.6224e-06 weaklyHypometh 1.0000e+00 1.5408e-03 weaklyHypometh 9.9931e-01 1.3926e-04 weaklyHypometh 1.0000e+00 0.02320935 weaklyHypometh -0.06758235 0.00209266 weaklyHypometh 0.182485 insignificant 0.3143612 0.2994569 0.02442517 12 0.369879 0.3494310 0.02044800 5.6801e-03 8.7237e-01 weaklyHypermeth 4.5441e-02 1.0000e+00 weaklyHypermeth 2.0966e-02 9.9418e-01 weaklyHypermeth 1.9235e-01 1.0000e+00 insignificant 4.3121e-02 1.7511e-01 insignificant 1.0000e+00 insignificant 0.3146939 0.421481 -0.06272514 12 0.396299 0.441419 -0.0451205 9.9995e-01 1.3141e-05 weaklyHypometh 1.0000e+00 0.013141 weaklyHypometh 9.9966e-01 1.6779e-04 weaklyHypometh 1.0000e+00 0.083896 weaklyHypometh -0.0476154 0.0763964 insignificant 1.00000 insignificant 0.2996894 0.421481 -0.0879196 12 0.3743903 0.441419 -0.06702905 9.9634e-01 1.3202e-05 weaklyHypometh 1.0000e+00 2.7504e-04 weaklyHypometh 9.9984e-01 1.6310e-03 weaklyHypometh 1.0000e+00 3.2463e-02 weaklyHypometh -0.0907360 5.1898e-03 weaklyHypometh 1.1039e-01 insignificant chr4 4815579 4816579 15710 STX18 ENSG00000168818 0.118723 543 8 0.2408097 386 9 0.0760172 285 9 0.1810187 496 8 0.023354 211 8 0.2468522 659 9 0.0733022 294 9 0.1263269 265 9 0.095100 319 9 0.0952922 227 7 0.143017 310 9 0.075126 133 6 0.1713391 202 8 0.0763889 42 4 0.0906709 269 8 0.0608466 122 7 0.060012 371 7 0.1102247 612 8 0.121583 274 9 0.1192857 662 9 0.270720 102 7 0.0051684 235 6 0.1241692 344 8 0.1409165 104 8 0.0442576 491 9 0.1451606 471 9 0.183502 310 9 0.101309 107 6 0.0321708 310 8 0.232343 529 8 0.046430 531 9 0.245270 514 9 0.0313478 421 9 0.0693730 255 9 0.234814 306 9 0.0416667 196 8 0.2715318 149 9 0.0110136 517 9 0.0122022 819 9 0.079668 564 9 0.1055219 621 9 0.1229992 448 8 0.147604 531 9 0.0964417 0.0630714 0.1050476 0.0395911 0.0334950 0.1352725 0.0790080 0.0743470 0.0745644 0.0798788 0.072318 0.102551 0.0269703 0.0434906 0.0457846 0.0519948 0.1001326 0.0754716 0.022524 0.017708 0.2842920 0.0127832 0.120437 0.0686888 0.0298505 0.0507529 0.0754715 0.193019 0.04443091 0.0413715 0.0174498 0.1893515 0.0345196 0.0333691 0.152941 0.0465587 0.293596 0.0036023 0.0157035 0.0570360 0.0052503 0.0288924 0.039399 7 0.073985 0.0846325 -0.01179786 8 0.133560 0.181809 -0.04824844 0.9997813 7.4063e-01 insignificant 1.00000 1.000000 insignificant 0.9992367 0.86190441 insignificant 1 1.00000 insignificant -0.01568693 0.592833 insignificant 1 insignificant 0.0745844 0.0998372 -0.01736599 8 0.209131 0.1007080 0.1084228 4.6600e-01 1.5506e-02 weaklyHypometh 1.0000e+00 7.2720e-01 insignificant 2.9785e-01 8.9052e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0053068 9.1562e-01 insignificant 1.0000e+00 insignificant 0.0739352 0.029175 4.4011e-02 8 0.113696 0.082776 0.0309204 9.5497e-04 9.9917e-01 weaklyHypermeth 3.6730e-02 1.0000e+00 weaklyHypermeth 1.1863e-02 9.8892e-01 weaklyHypermeth 3.1797e-01 1.00000000 insignificant 0.02166548 0.44236877 insignificant 1.000000 insignificant 0.0849430 0.0998914 -0.00690768 9 0.225638 0.1079015 0.11773691 3.0587e-01 1.7800e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.6143e-01 8.9145e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.0994e-02 7.0128e-01 insignificant 1.0000e+00 insignificant 0.0837475 0.029175 0.05469937 9 0.140894 0.082776 0.0581179 4.9403e-03 9.9992e-01 weaklyHypermeth 1.3001e-01 1.000000 insignificant 4.0051e-02 9.9287e-01 weaklyHypermeth 8.1737e-01 1.000000 insignificant 0.0373524 0.3002050 insignificant 1.00000 insignificant 0.1001088 0.029175 0.0654702 9 0.1510621 0.082776 0.06828623 2.3745e-02 9.7171e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 3.8490e-01 9.3903e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0163587 7.6045e-01 insignificant 1.0000e+00 insignificant chr4 4905479 4906479 15712 STX18 ENSG00000168818 0.144360 751 6 0.0442134 439 8 0.0436684 283 6 0.1354012 490 6 0.158926 279 9 0.3621593 532 6 0.1873538 314 8 0.1666667 303 8 0.137767 364 6 0.2608662 247 6 0.061220 385 8 0.107239 109 6 0.0212963 194 6 0.0915435 222 6 0.0277120 326 6 0.1836977 176 6 0.000000 12 0 0.2015080 1368 6 0.042372 411 6 0.0750891 529 6 0.066907 115 6 0.0293149 110 6 0.1004841 208 8 0.1238354 126 8 0.1195183 312 8 0.1416435 517 7 0.204669 368 8 0.176835 189 8 0.0295122 358 6 0.032354 440 8 0.083741 524 8 0.094108 370 6 0.2206662 261 8 0.0385269 434 8 0.037000 655 5 0.4166667 36 3 0.0701802 268 10 0.3387640 446 8 0.0859338 678 9 0.155870 539 3 0.2532540 820 7 0.2155632 869 6 0.350961 580 8 0.0825866 0.0376036 0.0969840 0.0606431 0.0863016 0.2393417 0.0829444 0.0790165 0.0556039 0.1174688 0.138439 0.089926 0.0382508 0.1187610 0.0684586 0.0696737 0.0807322 0.1270877 0.050093 0.045884 0.0428505 0.0475377 0.118019 0.1439279 0.0590216 0.0541636 0.0808221 0.061883 0.07251029 0.0477735 0.0394963 0.1656396 0.3161470 0.0230141 0.072214 0.3656823 0.062677 0.4458113 0.0476495 0.0824479 0.0490146 0.1033689 0.073452 6 0.099586 0.0758867 0.02346429 6 0.303584 0.125606 0.17797730 0.2416680 9.9916e-01 insignificant 1.00000 1.000000 insignificant 0.3404923 0.96443502 insignificant 1 1.00000 insignificant 0.02240940 0.395944 insignificant 1 insignificant 0.0993917 0.1700000 -0.07060202 6 0.254479 0.1277157 0.1267637 9.7984e-01 1.7015e-02 weaklyHypometh 1.0000e+00 7.3978e-01 insignificant 9.5239e-01 2.0404e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0643144 3.9455e-01 insignificant 1.0000e+00 insignificant 0.0994046 0.082042 2.3436e-02 6 0.277614 0.261227 0.0163868 3.7586e-01 6.8479e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.8865e-01 4.3510e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.08966327 0.11983535 insignificant 1.000000 insignificant 0.0756950 0.1700000 -0.09141825 8 0.115341 0.1277157 -0.01237456 9.9834e-01 2.0413e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9868e-01 2.4868e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -8.6724e-02 2.5913e-01 insignificant 1.0000e+00 insignificant 0.0757367 0.082042 -0.00184976 6 0.125827 0.261227 -0.1354004 9.4662e-01 4.2866e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 9.5503e-01 1.3547e-01 insignificant 1.0000e+00 1.000000 insignificant -0.1120727 0.0643428 insignificant 1.00000 insignificant 0.1701621 0.082042 0.0946619 6 0.1393262 0.261227 -0.12190090 3.0796e-01 8.0006e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.3542e-01 7.8082e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0253489 7.6102e-01 insignificant 1.0000e+00 insignificant chr4 4925179 4926179 15713 MSX1 ENSG00000163132 0.083028 542 13 0.1356842 583 18 0.1615400 608 16 0.0661029 390 12 0.147679 340 16 0.2173723 658 13 0.2070579 645 16 0.2435037 573 16 0.139492 992 16 0.1894614 792 16 0.146076 524 18 0.087808 779 16 0.1315151 773 16 0.1203908 303 9 0.1318057 797 16 0.0810931 674 16 0.086368 486 16 0.1178045 378 12 0.165677 381 16 0.1144658 620 13 0.109347 211 16 0.1499686 366 11 0.1327359 497 15 0.0951075 321 16 0.0867582 247 9 0.1149009 721 16 0.070230 414 15 0.152273 348 16 0.1273962 417 16 0.147810 633 18 0.144427 560 18 0.124636 645 13 0.3256542 471 16 0.5210729 366 16 0.611480 103 3 0.2299242 214 11 0.4633162 267 16 0.3555185 505 17 0.0575349 732 13 0.126927 551 13 0.1317147 398 13 0.0208236 487 13 0.118229 321 12 0.0251106 0.0474359 0.0587526 0.0148559 0.0407606 0.0803156 0.0411098 0.0397761 0.0279151 0.0267079 0.056272 0.030157 0.0194093 0.0366027 0.0199761 0.0250927 0.0287429 0.0654494 0.022298 0.061494 0.0514830 0.0268047 0.049216 0.0450027 0.0273353 0.0175258 0.0253999 0.086363 0.02314337 0.0447162 0.0340569 0.0774142 0.2318844 0.4916767 0.550857 0.1913756 0.464656 0.2131299 NA NA NA NA NA 10 0.055340 0.0522305 0.00269662 16 0.151814 0.136221 0.01559316 0.0932795 6.4385e-01 insignificant 1.00000 1.000000 insignificant 0.0482918 0.88443677 weaklyHypermeth 1 1.00000 insignificant 0.01739705 0.199935 insignificant 1 insignificant 0.0554148 0.3852544 -0.32142562 16 0.168394 0.3775063 -0.2091120 1.0000e+00 5.3889e-51 hypomethylated 1.0000e+00 5.3889e-48 hypomethylated 1.0000e+00 6.1834e-14 hypomethylated 1.0000e+00 3.0917e-11 hypomethylated -0.2791315 4.0568e-03 weaklyHypometh 8.1136e-02 weaklyHypometh 0.0371475 0.029731 1.0921e-02 13 0.109607 0.114440 -0.0048337 4.1736e-03 9.4412e-01 weaklyHypermeth 1.0918e-01 1.0000e+00 insignificant 7.7458e-03 9.5261e-01 weaklyHypermeth 2.7664e-01 1.00000000 insignificant 0.04765044 0.09986712 insignificant 1.000000 insignificant 0.0522305 0.3854545 -0.33200722 16 0.136221 0.3963817 -0.26016073 1.0000e+00 3.5126e-34 hypomethylated 1.0000e+00 3.5126e-31 hypomethylated 1.0000e+00 6.4299e-14 hypomethylated 1.0000e+00 3.2149e-11 hypomethylated -2.9653e-01 3.2752e-03 weaklyHypometh 6.6840e-02 weaklyHypometh 0.0424125 0.029731 0.00804733 13 0.083694 0.114440 -0.0307465 1.9715e-01 5.9565e-01 insignificant 1.0000e+00 1.000000 insignificant 4.1002e-01 7.3300e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0302534 0.2519725 insignificant 1.00000 insignificant 0.3920680 0.029731 0.3347625 13 0.3931613 0.114440 0.27872108 2.6698e-16 1.0000e+00 hypermethylated 1.3349e-13 1.0000e+00 hypermethylated 8.0670e-09 1.0000e+00 hypermethylated 8.0670e-06 1.0000e+00 hypermethylated 0.3267819 1.4243e-03 weaklyHypermeth 4.4511e-02 weaklyHypermeth chr4 5094579 5095579 15724 CYTL1 ENSG00000170891 0.788805 98 5 0.5919180 79 5 0.6400000 60 5 0.7717949 77 5 0.750303 34 5 0.7980423 174 5 0.5464286 51 5 0.7546320 64 5 0.748148 48 5 0.8412698 33 5 0.740707 161 5 0.866667 14 0 0.6933333 54 5 0.7358974 37 5 0.6785714 54 5 0.3000000 12 1 0.000000 1 0 0.8286430 67 5 0.845139 69 5 0.7949350 86 5 0.783333 19 0 0.7008929 42 5 0.7761905 62 5 0.8634921 37 5 0.8750000 36 4 0.7368486 82 5 0.862726 53 5 0.760000 9 1 0.6949735 46 2 0.837862 88 5 0.762143 66 5 0.857648 135 5 0.5205556 55 5 0.5266667 51 5 0.918254 72 5 0.5833333 6 0 0.6014628 46 5 0.8298901 85 5 0.8492857 34 5 0.780702 91 5 0.7095543 72 5 0.8038095 46 5 0.876906 83 5 0.7929907 0.5892789 0.6456790 0.7725546 0.7619155 0.7989924 0.6629630 0.7656566 0.6990398 0.8259847 0.733838 0.847737 0.7094650 0.7543526 0.6831276 0.3580247 NA 0.8272158 0.850009 0.807260 0.7901235 0.9217372 0.781893 0.8258671 0.8827160 0.7393622 0.8485435 0.800000 0.60384088 0.7956253 0.7712522 0.7967360 0.5233882 0.5345679 0.896473 0.5683598 0.720833 0.8200516 0.8504850 0.7808822 0.8588161 0.8038801 0.843137 0 0.747054 0.7955556 -0.04827178 5 0.695063 0.798705 -0.10364221 0.9948840 2.8023e-02 weaklyHypometh 1.00000 1.000000 insignificant 0.9981617 0.03182411 weaklyHypometh 1 1.00000 insignificant -0.10683075 0.042433 lowCoverage 1 lowCoverage 0.7480315 0.7079365 0.03966840 5 0.746739 0.6595843 0.0871544 4.5962e-02 5.4241e-01 weaklyHypermeth 2.9090e-01 1.0000e+00 insignificant 2.5544e-01 5.7811e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0224013 7.9250e-01 lowCoverage 1.0000e+00 lowCoverage 0.7482242 0.825153 -7.6996e-02 5 0.760084 0.772337 -0.0122534 9.7120e-01 7.6436e-03 weaklyHypometh 1.0000e+00 3.0097e-01 insignificant 9.9082e-01 3.7577e-03 weaklyHypometh 1.0000e+00 0.24711751 insignificant -0.11828978 0.04177855 lowCoverage 0.708111 lowCoverage 0.7946429 0.7079365 0.08653437 5 0.769949 0.6595843 0.11036455 1.2683e-02 9.0988e-01 weaklyHypermeth 9.1903e-02 1.0000e+00 weaklyHypermeth 6.1548e-02 9.8362e-01 insignificant 4.4279e-01 1.0000e+00 insignificant 1.2923e-01 1.2200e-01 lowCoverage 9.6659e-01 lowCoverage 0.7952167 0.825153 -0.02830660 5 0.787163 0.772337 0.0148251 8.4012e-01 2.8004e-01 insignificant 1.0000e+00 1.000000 insignificant 7.7654e-01 4.7374e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0114590 0.7490789 lowCoverage 1.00000 lowCoverage 0.7101911 0.825153 -0.1131757 5 0.7695150 0.772337 -0.00282239 7.9076e-01 2.8748e-02 weaklyHypometh 1.0000e+00 2.1295e-01 insignificant 9.5690e-01 6.6910e-02 insignificant 1.0000e+00 5.2685e-01 insignificant -0.1406911 1.0360e-01 lowCoverage 8.5618e-01 lowCoverage chr4 5735679 5736679 15741 C4orf6 ENSG00000082929 0.881058 101 5 0.8323810 95 5 0.8712225 95 5 0.8626650 78 3 0.815495 103 5 0.8463368 142 5 0.9035719 136 4 0.8903720 92 4 0.833983 97 5 0.9252921 121 4 0.902830 185 5 0.633824 102 4 0.9277638 146 4 0.6666667 14 2 0.8861668 133 5 0.7514221 87 4 0.812437 64 4 0.9532468 64 5 0.954675 119 4 0.8302818 93 4 0.915322 59 4 0.7684729 62 2 0.8033613 69 4 0.9541667 74 5 0.9868421 42 2 0.8828746 130 5 0.716485 81 4 0.959259 75 5 0.8979487 103 4 0.955935 107 5 0.944269 103 5 0.905920 116 4 0.3429579 139 5 0.3243056 74 4 0.144311 134 2 0.2239583 33 2 0.3491935 72 5 0.3361111 90 5 0.9655844 57 3 0.959596 70 3 0.8941176 72 2 0.7857143 67 3 0.917406 69 3 0.8477818 0.8392203 0.9027386 0.9458863 0.7212553 0.7964493 0.8731136 0.8814241 0.7703190 0.8717056 0.948961 0.749960 0.8857373 0.8243545 0.8954179 0.7236802 0.8258076 0.8896104 0.958113 0.939961 0.9296947 0.9047445 0.818358 0.9593636 0.9819094 0.8995079 0.9132234 0.974054 0.87920541 0.9767768 0.9731587 0.8840550 0.4500983 0.3824328 0.128406 0.2105082 0.469621 0.5403475 0.9374376 0.9133644 0.9772140 0.9505495 0.881173 2 0.881471 0.9138100 -0.03887385 5 0.877574 0.905096 -0.02752271 0.9593732 5.1891e-02 insignificant 1.00000 1.000000 insignificant 0.9908665 0.01365647 weaklyHypometh 1 0.71876 insignificant -0.04182016 0.189834 lowCoverage 1 lowCoverage 0.8814707 0.3597786 0.52823775 5 0.877574 0.3196325 0.5579412 6.7063e-42 1.0000e+00 hypermethylated 4.4709e-40 1.0000e+00 hypermethylated 1.3369e-11 1.0000e+00 hypermethylated 7.8641e-10 1.0000e+00 hypermethylated 0.5622783 3.5414e-07 lowCoverage 2.5296e-05 lowCoverage 0.8814707 0.931343 -6.8460e-02 2 0.877574 0.926381 -0.0488070 9.4660e-01 4.1805e-04 lowCoverage 1.0000e+00 5.2257e-02 lowCoverage 9.9289e-01 2.0953e-04 lowCoverage 1.0000e+00 0.02993253 lowCoverage -0.05539898 0.18463288 lowCoverage 1.000000 lowCoverage 0.9138100 0.3597786 0.56150167 5 0.905096 0.3196325 0.58546393 9.3099e-28 1.0000e+00 hypermethylated 4.6550e-26 1.0000e+00 hypermethylated 6.4617e-11 1.0000e+00 hypermethylated 3.8010e-09 1.0000e+00 hypermethylated 6.0410e-01 4.2491e-08 lowCoverage 3.8628e-06 lowCoverage 0.9138100 0.931343 -0.01637296 2 0.905096 0.926381 -0.0212843 9.2553e-01 1.7299e-02 lowCoverage 1.0000e+00 0.657667 lowCoverage 9.0072e-01 6.4407e-02 lowCoverage 1.0000e+00 1.000000 lowCoverage -0.0135788 0.7464329 lowCoverage 1.00000 lowCoverage 0.3597786 0.931343 -0.5562157 2 0.3196325 0.926381 -0.60674825 1.0000e+00 1.3094e-15 lowCoverage 1.0000e+00 6.5469e-14 lowCoverage 1.0000e+00 1.8823e-07 lowCoverage 1.0000e+00 1.1073e-05 lowCoverage -0.6176773 3.8069e-07 lowCoverage 9.5171e-05 lowCoverage chr4 5838679 5839679 15743 EVC ENSG00000072840 0.695987 118 7 0.6129644 157 7 0.6626984 59 7 0.7926370 135 6 0.693093 52 3 0.6755427 93 7 0.7573099 62 3 0.7904762 74 7 0.653247 64 7 0.6587302 29 1 0.689421 147 7 0.580952 29 4 0.5910364 75 4 0.6409664 70 7 0.7410714 75 7 0.5000000 22 0 0.777778 15 0 0.6805736 180 6 0.690816 56 5 0.6746753 57 5 0.738095 20 0 0.8611111 21 0 0.7304052 90 4 0.6365079 42 3 0.5880117 67 3 0.7009310 88 7 0.625000 42 4 0.916667 6 0 0.7270721 99 7 0.696429 79 7 0.758503 64 7 0.611355 67 7 0.7071289 97 7 0.7137624 55 3 0.474790 86 7 0.6190476 25 3 0.5870554 93 7 0.6722222 69 7 0.7521413 127 6 0.621032 135 6 0.7302927 137 6 0.7127128 92 6 0.613946 106 7 0.7216161 0.6293994 0.6635349 0.7948553 0.7090067 0.6856363 0.7899531 0.8137255 0.6494780 0.6535948 0.715082 0.628758 0.6382641 0.6847174 0.7573529 0.4754902 0.7506635 0.7094623 0.712885 0.708913 0.8202614 0.8355311 0.743530 0.6884532 0.6325384 0.7387140 0.6344538 0.858541 0.71896935 0.7418301 0.8097572 0.6538462 0.6644012 0.7374039 0.491349 0.6712418 0.632365 0.7275599 0.7850741 0.6924020 0.7384502 0.7745790 0.642779 0 0.701083 0.7007299 -0.00442138 7 0.726305 0.727863 -0.00155776 0.7210953 2.9583e-01 insignificant 1.00000 1.000000 insignificant 0.8733893 0.08484499 insignificant 1 1.00000 insignificant -0.03784189 0.263459 lowCoverage 1 lowCoverage 0.7007020 0.6052009 0.08896293 7 0.687206 0.5996513 0.0875549 2.9255e-04 9.9963e-01 weaklyHypermeth 2.8965e-03 1.0000e+00 weaklyHypermeth 1.0540e-02 9.3550e-01 weaklyHypermeth 1.0979e-01 1.0000e+00 insignificant 0.0489977 2.6360e-01 insignificant 1.0000e+00 insignificant 0.7007020 0.763819 -3.3078e-02 6 0.687206 0.702285 -0.0150786 8.5071e-01 6.9751e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 8.0669e-01 3.8187e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant -0.00802601 0.81521437 insignificant 1.000000 insignificant 0.7002924 0.6052009 0.08911786 7 0.688986 0.5996513 0.08933518 2.1123e-03 9.9745e-01 weaklyHypermeth 1.8693e-02 1.0000e+00 weaklyHypermeth 4.6937e-03 9.6364e-01 weaklyHypermeth 5.3338e-02 1.0000e+00 weaklyHypermeth 8.6840e-02 8.9109e-02 lowCoverage 7.8166e-01 lowCoverage 0.7002924 0.763819 -0.01404565 6 0.688986 0.702285 -0.0132983 8.1198e-01 2.2071e-01 insignificant 1.0000e+00 1.000000 insignificant 6.3559e-01 6.5316e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0298159 0.4748408 lowCoverage 1.00000 lowCoverage 0.6052009 0.763819 -0.0974453 6 0.5996513 0.702285 -0.10263353 9.9153e-01 3.5119e-04 weaklyHypometh 1.0000e+00 5.3211e-03 weaklyHypometh 9.0699e-01 3.3736e-02 weaklyHypometh 1.0000e+00 2.9855e-01 insignificant -0.0570237 2.5385e-01 insignificant 1.0000e+00 insignificant chr4 6026379 6027379 15745 CRMP1 ENSG00000072832 0.879564 158 5 0.7891211 205 5 0.6923302 86 5 0.9008772 178 5 0.933684 85 3 0.8712591 254 5 0.7142857 18 2 0.9148395 129 5 0.768686 83 5 0.9219298 120 5 0.916603 185 5 0.900000 35 2 0.9048442 219 5 0.8897253 64 4 0.9487840 102 5 1.0000000 66 2 1.000000 10 0 0.8609319 242 5 0.951282 171 5 0.8670647 161 5 0.800000 27 3 0.8579323 80 5 0.8602829 106 5 0.9695402 137 5 0.8987179 53 3 0.8761543 127 3 0.856466 86 5 0.904762 73 4 0.9131370 188 5 0.942010 218 5 0.909202 156 5 0.896313 134 5 0.6246283 150 5 0.7242013 137 5 0.514706 33 2 0.3416667 19 3 0.7712963 87 5 0.6295463 184 5 0.8207359 109 5 0.919044 194 5 0.9074830 144 4 0.9333333 117 5 0.901666 119 5 0.8651064 0.8307109 0.5910295 0.8629413 0.9096343 0.8875262 0.6557707 0.8973717 0.6730185 0.9246560 0.927123 0.885593 0.8986487 0.8519434 0.9354456 0.8778328 1.0000000 0.8543377 0.933724 0.847444 0.6327684 0.7696909 0.795939 0.9740405 0.9145163 0.8989560 0.8103373 0.892655 0.91465382 0.9285927 0.8789844 0.8758137 0.5821163 0.6990745 0.517020 0.4116647 0.804065 0.4319140 0.7360151 0.8922316 0.8555287 0.8728814 0.883080 1 0.884092 0.9018051 -0.02367358 5 0.879375 0.909129 -0.02975398 0.9838477 4.6703e-02 weaklyHypometh 1.00000 1.000000 insignificant 0.6420043 0.22525363 insignificant 1 1.00000 insignificant -0.00908583 0.690039 lowCoverage 1 lowCoverage 0.8840918 0.6377049 0.23551012 5 0.879375 0.6493415 0.2300332 9.8817e-15 1.0000e+00 hypermethylated 2.6005e-13 1.0000e+00 hypermethylated 5.7499e-08 1.0000e+00 hypermethylated 1.6428e-06 1.0000e+00 hypermethylated 0.2802832 5.6288e-03 lowCoverage 1.0620e-01 lowCoverage 0.8840918 0.888726 -1.1407e-02 5 0.879375 0.898755 -0.0193806 6.8603e-01 1.4267e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.9953e-01 2.8216e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.01516176 0.58557100 lowCoverage 1.000000 lowCoverage 0.9018051 0.6377049 0.26453480 5 0.909129 0.6493415 0.25978715 2.2117e-16 1.0000e+00 hypermethylated 6.3192e-15 1.0000e+00 hypermethylated 1.3077e-08 1.0000e+00 hypermethylated 5.6857e-07 1.0000e+00 hypermethylated 2.8937e-01 5.3880e-03 lowCoverage 1.0361e-01 lowCoverage 0.9018051 0.888726 0.02124839 5 0.909129 0.898755 0.0103734 3.0587e-01 6.5621e-01 insignificant 1.0000e+00 1.000000 insignificant 4.1980e-01 6.5352e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0060759 0.8026694 lowCoverage 1.00000 lowCoverage 0.6377049 0.888726 -0.2393036 5 0.6493415 0.898755 -0.24941379 1.0000e+00 5.0329e-09 hypomethylated 1.0000e+00 1.6235e-07 hypomethylated 1.0000e+00 1.3333e-06 hypomethylated 1.0000e+00 7.0175e-05 hypomethylated -0.2954449 4.4000e-03 lowCoverage 1.0232e-01 lowCoverage chr4 6676679 6677679 15755 MAN2B2 ENSG00000013288 0.837155 450 9 0.7701940 148 9 0.7856691 140 9 0.7404096 204 9 0.930057 76 7 0.7600907 1206 12 0.7415007 154 7 0.8115533 132 7 0.733333 148 7 0.8090914 136 7 0.857541 209 7 0.834380 74 7 0.7504204 228 7 NA 0 0 0.8954451 156 7 0.8058132 76 7 0.668475 235 9 0.6390236 270 12 0.851637 141 7 0.7399204 1431 9 0.697230 74 7 0.7621119 126 7 0.7176280 211 9 0.6885772 229 7 0.8628269 104 7 0.5954843 225 12 0.636096 274 7 0.756253 135 7 0.8617089 99 6 0.608148 254 10 0.621111 198 12 0.732324 1043 10 0.7083928 208 9 0.7807224 135 7 0.819252 149 8 0.8433826 133 7 0.7581262 180 7 0.6098096 203 10 0.6886525 421 10 0.688677 430 11 0.5696303 262 9 0.8019568 267 10 0.788797 321 10 0.8785015 0.7627693 0.7625283 0.8707258 0.9285937 0.8775043 0.7479655 0.8461942 0.7435350 0.8156890 0.873097 0.833810 0.7829213 NA 0.9088134 0.8286994 0.7768897 0.8761426 0.870273 0.877123 0.7349950 0.7676038 0.793508 0.7361297 0.8784417 0.7986522 0.6836279 0.786914 0.86482025 0.8631171 0.8399664 0.8684721 0.6913894 0.7912565 0.835659 0.8460558 0.800708 0.8696354 0.8882820 0.9311442 0.8931415 0.8982493 0.909695 7 0.847086 0.8118479 0.03729853 8 0.688244 0.626635 0.06160912 0.1407805 9.0958e-01 insignificant 1.00000 1.000000 insignificant 0.4574498 0.97323043 insignificant 1 1.00000 insignificant 0.07583343 0.023446 weaklyHypermeth 1 insignificant 0.8470861 0.7678571 0.06490212 8 0.688244 0.5789403 0.1093033 5.9967e-04 1.0000e+00 weaklyHypermeth 5.6044e-03 1.0000e+00 weaklyHypermeth 1.1488e-01 9.9694e-01 insignificant 8.0338e-01 1.0000e+00 insignificant 0.0341775 4.0094e-01 insignificant 1.0000e+00 insignificant 0.8470861 0.887713 -4.6457e-02 8 0.688244 0.662581 0.0256622 9.9995e-01 3.9729e-02 weaklyHypometh 1.0000e+00 7.5511e-01 insignificant 9.9906e-01 1.8198e-02 weaklyHypometh 1.0000e+00 0.64991854 insignificant 0.07991575 0.13344789 insignificant 1.000000 insignificant 0.8118479 0.7678571 0.03606084 8 0.626635 0.5789403 0.04769420 5.5592e-03 9.8930e-01 weaklyHypermeth 4.5197e-02 1.0000e+00 weaklyHypermeth 3.1590e-01 9.0292e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -4.1656e-02 3.5677e-01 insignificant 1.0000e+00 insignificant 0.8118479 0.887713 -0.08036786 8 0.626635 0.662581 -0.0359470 9.7953e-01 1.8161e-02 weaklyHypometh 1.0000e+00 0.657667 insignificant 9.9722e-01 5.7314e-03 weaklyHypometh 1.0000e+00 0.593578 insignificant 0.0040823 0.9363438 insignificant 1.00000 insignificant 0.7678571 0.887713 -0.1178502 8 0.5789403 0.662581 -0.08364117 1.0000e+00 8.9602e-05 weaklyHypometh 1.0000e+00 1.5720e-03 weaklyHypometh 1.0000e+00 3.8785e-03 weaklyHypometh 1.0000e+00 7.0518e-02 weaklyHypometh 0.0457383 4.2406e-01 insignificant 1.0000e+00 insignificant chr4 6741279 6742279 15758 ENSG00000170846 0.708991 289 5 0.5620748 253 5 0.6283534 141 6 0.7953095 252 5 0.510375 145 8 0.6445731 428 6 0.6424602 236 6 0.5362920 189 6 0.669740 220 6 0.7193135 137 5 0.697851 215 6 0.696615 104 5 0.2655979 152 5 0.5770518 127 5 0.6814004 192 5 0.6236760 78 6 0.642857 44 2 0.4557800 299 5 0.271807 151 5 0.7230405 333 6 0.718434 54 5 0.5741875 72 3 0.5786056 118 5 0.7157979 160 4 0.6623377 39 4 0.3682177 264 5 0.517990 126 5 0.358860 101 5 0.4643402 205 5 0.543259 371 6 0.428422 370 6 0.700706 345 6 0.7092120 200 5 0.7364532 135 5 0.924370 127 5 0.4750000 31 3 0.5510766 201 8 0.5956008 273 6 0.7291110 294 5 0.725595 263 5 0.6905519 241 5 0.6475038 180 5 0.540921 270 5 0.6561840 0.3938263 0.5341043 0.7416030 0.6388672 0.6088080 0.6606943 0.4760198 0.5450776 0.6134710 0.675019 0.557657 0.3687406 0.6496141 0.5481265 0.7469812 0.6505576 0.5868682 0.302057 0.744062 0.6213699 0.6388128 0.573196 0.6342403 0.7273359 0.5064283 0.5525580 0.568652 0.53997514 0.4113000 0.4416688 0.6793203 0.7618289 0.7837541 0.995466 0.4390602 0.796043 0.7329957 0.7769700 0.7575477 0.7054754 0.6476114 0.684880 4 0.579172 0.5330932 0.03262006 5 0.567830 0.574279 -0.00644877 0.2482590 8.8578e-01 insignificant 1.00000 1.000000 insignificant 0.1321964 0.88391782 insignificant 1 1.00000 insignificant 0.05006142 0.314766 lowCoverage 1 lowCoverage 0.5791719 0.6390900 -0.07791268 5 0.567830 0.5796451 -0.0118146 8.4625e-01 3.5540e-04 weaklyHypometh 1.0000e+00 3.5540e-02 weaklyHypometh 8.8489e-01 3.0486e-03 weaklyHypometh 1.0000e+00 3.0486e-01 insignificant -0.0626274 4.1441e-01 insignificant 1.0000e+00 insignificant 0.5785460 0.651442 -9.7652e-02 5 0.559720 0.586627 -0.0269065 9.9177e-01 2.2507e-03 weaklyHypometh 1.0000e+00 1.5005e-01 insignificant 9.9809e-01 1.7623e-03 weaklyHypometh 1.0000e+00 0.14685958 insignificant -0.06407848 0.19632469 insignificant 1.000000 insignificant 0.5330932 0.6390900 -0.10692898 5 0.574279 0.5796451 -0.00536585 8.3399e-01 6.1323e-05 weaklyHypometh 1.0000e+00 1.0221e-02 weaklyHypometh 9.7409e-01 1.8074e-03 weaklyHypometh 1.0000e+00 3.0123e-01 insignificant -1.1269e-01 1.7133e-01 lowCoverage 1.0000e+00 lowCoverage 0.5315356 0.651442 -0.13137284 5 0.567552 0.586627 -0.0190749 9.7740e-01 5.1973e-05 weaklyHypometh 1.0000e+00 0.017324 weaklyHypometh 9.7839e-01 1.0198e-03 weaklyHypometh 1.0000e+00 0.203962 insignificant -0.1141399 0.0443467 lowCoverage 1.00000 lowCoverage 0.6368534 0.651442 -0.0017099 5 0.5488294 0.586627 -0.03779710 3.9215e-01 6.7507e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.1146e-01 8.7732e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0014511 9.8487e-01 insignificant 1.0000e+00 insignificant chr4 6804979 6805979 15765 CNO ENSG00000186222 0.728582 241 7 0.8615192 373 7 0.6613700 119 7 0.7419696 206 7 0.608198 80 6 0.7715783 279 7 0.6840273 92 7 0.7315506 253 7 0.679436 95 5 0.8054924 69 5 0.764493 372 7 0.506173 35 2 0.8067672 149 7 0.7890264 104 7 0.6810745 109 7 0.2857143 18 0 0.416667 5 0 0.7098177 462 7 0.671275 476 7 0.7132943 229 7 0.811111 77 6 0.5901310 78 7 0.6207513 134 7 0.5157915 106 8 0.6948646 168 6 0.6879038 404 7 0.722046 289 7 0.866667 25 2 0.6381809 341 7 0.661461 458 8 0.856501 445 8 0.908374 337 7 0.7924410 242 7 0.6754576 341 7 0.725163 312 6 0.5955782 69 3 0.5507563 138 9 0.6297083 556 7 0.3331386 288 8 0.505720 271 7 0.2625815 182 7 0.3296466 305 7 0.637709 201 7 0.7641571 0.8057300 0.6003007 0.6884516 0.7819984 0.6894138 0.7507008 0.8100636 0.8451638 0.8720209 0.834665 0.548348 0.7882132 0.8158962 0.7511613 0.3790150 NA 0.6836733 0.795425 0.640918 0.8416817 0.6522302 0.771718 0.5850799 0.6995493 0.8062725 0.7876395 0.968970 0.73069660 0.8235673 0.8186011 0.9032881 0.8265113 0.8281968 0.937560 0.7522920 0.774677 0.6984012 0.3145595 0.4337180 0.2607935 0.3133025 0.513024 3 0.760234 0.7935010 -0.03679472 7 0.684350 0.659153 0.02519705 0.9842554 1.0240e-01 insignificant 1.00000 1.000000 insignificant 0.9789383 0.19710007 insignificant 1 1.00000 insignificant -0.03358068 0.480253 insignificant 1 insignificant 0.7602339 0.7895054 -0.03754752 7 0.684350 0.5596830 0.1246666 5.9655e-01 5.0132e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.8544e-01 3.1261e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0193838 6.8984e-01 insignificant 1.0000e+00 insignificant 0.7605109 0.405774 3.6232e-01 7 0.721220 0.424108 0.2971113 6.2986e-25 9.8544e-01 hypermethylated 6.2986e-22 1.0000e+00 hypermethylated 3.9298e-10 9.9967e-01 hypermethylated 3.9298e-07 1.00000000 hypermethylated 0.26714202 0.01328216 weaklyHypermeth 0.390652 insignificant 0.7943337 0.7899819 -0.00751335 7 0.719076 0.6105633 0.10851227 1.1190e-01 6.1780e-01 insignificant 6.4829e-01 1.0000e+00 insignificant 2.8328e-01 8.2625e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.2965e-02 3.1184e-01 insignificant 1.0000e+00 insignificant 0.7941176 0.405774 0.39474291 7 0.650983 0.424108 0.2268748 3.3701e-21 9.9522e-01 hypermethylated 3.3701e-18 1.000000 hypermethylated 2.6950e-10 9.9950e-01 hypermethylated 2.6950e-07 1.000000 hypermethylated 0.3007227 0.0076049 weaklyHypermeth 0.47530 insignificant 0.7903323 0.406100 0.3955393 7 0.6351329 0.471231 0.16390145 8.9608e-11 6.5224e-01 hypermethylated 2.2402e-08 1.0000e+00 hypermethylated 8.2734e-08 9.8999e-01 hypermethylated 4.1367e-05 1.0000e+00 hypermethylated 0.2477582 1.8448e-02 weaklyHypermeth 2.8825e-01 insignificant chr4 6815279 6816279 15767 CNO ENSG00000186222 0.642744 75 6 0.5256614 71 6 0.6250000 42 6 0.6276014 76 6 0.759722 41 3 0.5539683 88 6 0.5076720 71 6 0.6642300 112 6 0.542208 54 6 0.5774306 48 6 0.700044 129 6 0.688889 30 3 0.6647436 60 6 0.6111111 43 4 0.7767857 47 3 0.4277778 34 3 0.867925 53 1 0.6809524 68 4 0.671402 82 6 0.5827160 74 6 0.796296 25 1 1.0000000 5 0 0.7718254 47 6 0.7083333 33 4 0.6680556 61 5 0.5596154 89 6 0.631313 32 4 0.743056 31 3 0.5037879 39 3 0.620477 68 6 0.616898 74 6 0.733730 66 6 0.5126263 77 6 0.4880952 46 6 0.461497 103 6 0.6250000 12 0 0.6221225 78 6 0.6328431 72 6 0.6344498 78 6 0.635714 82 6 0.6930556 99 6 0.5944444 30 2 0.606063 81 6 0.6212185 0.5131719 0.6181230 0.6294242 0.7792880 0.5410849 0.5250270 0.6483279 0.5729416 0.6028317 0.699982 0.700324 0.6504854 0.6294498 0.7582062 0.5144013 NA 0.6771613 0.651478 0.598490 0.7950378 0.8834264 0.787564 0.6762136 0.7051780 0.5364700 0.6212121 0.597627 0.48631951 0.6104044 0.5885248 0.7244568 0.4705796 0.4608761 0.471412 0.5631068 0.558632 0.6332381 0.6156919 0.6071113 0.6860841 0.5718138 0.577473 1 0.642527 0.6333333 0.01347042 6 0.604962 0.726456 -0.12149453 0.4405419 5.8617e-01 insignificant 1.00000 1.000000 insignificant 0.9211565 0.15901305 insignificant 1 1.00000 insignificant -0.06118647 0.177732 lowCoverage 1 lowCoverage 0.6427469 0.5374677 0.10757596 6 0.639949 0.5374488 0.1025003 1.0883e-03 9.9970e-01 weaklyHypermeth 9.7173e-03 1.0000e+00 weaklyHypermeth 1.5929e-02 9.9282e-01 weaklyHypermeth 1.5537e-01 1.0000e+00 insignificant 0.0778986 7.2683e-02 lowCoverage 7.3417e-01 lowCoverage 0.6427469 0.645946 1.5939e-04 6 0.639949 0.637142 0.0028075 2.8947e-01 5.1584e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.3505e-01 5.2793e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.00218371 0.93949576 lowCoverage 1.000000 lowCoverage 0.6320423 0.5374677 0.09127151 6 0.635275 0.5374488 0.09782632 8.1753e-03 9.9950e-01 weaklyHypermeth 6.2407e-02 1.0000e+00 weaklyHypermeth 8.1050e-03 9.9986e-01 weaklyHypermeth 8.2936e-02 1.0000e+00 weaklyHypermeth 1.3909e-01 1.2520e-02 lowCoverage 2.0525e-01 lowCoverage 0.6320423 0.645946 0.00257257 6 0.635275 0.637142 -0.0018665 5.6449e-01 5.4956e-01 insignificant 1.0000e+00 1.000000 insignificant 1.7098e-01 9.4885e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0633702 0.1448492 lowCoverage 1.00000 lowCoverage 0.5374677 0.645946 -0.0973308 6 0.5374488 0.637142 -0.09969283 9.9605e-01 7.8984e-03 weaklyHypometh 1.0000e+00 7.1157e-02 weaklyHypometh 9.9664e-01 9.7689e-02 insignificant 1.0000e+00 7.1828e-01 insignificant -0.0757148 7.1771e-02 insignificant 6.6193e-01 insignificant chr4 6819079 6820079 15769 CNO ENSG00000186222 0.771767 295 7 0.7250422 165 7 0.6123512 91 7 0.8345917 223 7 0.942845 61 4 0.6041160 293 7 0.6817409 75 7 0.7381181 105 7 0.693883 75 7 0.8028526 93 6 0.811563 311 7 0.647409 49 3 0.7916074 106 7 0.7500000 40 4 0.6500057 119 7 0.5989583 42 3 0.765437 64 3 0.7407146 208 7 0.867840 120 7 0.8600490 254 7 0.823471 53 4 0.6392157 72 3 0.7718176 172 7 0.7512755 55 3 0.9124150 59 6 0.6209288 214 7 0.608600 100 4 0.713542 45 2 0.7909113 99 6 0.838433 208 7 0.810524 177 7 0.771817 331 7 0.8295031 130 6 0.7275770 114 7 0.720565 219 7 0.8130252 48 3 0.6816017 89 7 0.7222703 193 7 0.8388225 236 7 0.810702 285 7 0.7562026 252 7 0.8238041 142 7 0.829811 250 7 0.8305704 0.7838039 0.7029094 0.8733744 0.9384912 0.8255088 0.7458151 0.7923471 0.7699289 0.8603415 0.855836 0.731904 0.8414792 0.7577440 0.8279494 0.7429907 0.8131440 0.8140991 0.895769 0.875880 0.8552757 0.8418774 0.825590 0.8202047 0.9128560 0.8011037 0.7466064 0.768886 0.84470986 0.7946752 0.8198682 0.8863511 0.8113572 0.7407976 0.777501 0.8012346 0.794506 0.7696485 0.8638634 0.8638345 0.8221558 0.8449264 0.875811 2 0.826992 0.8397476 -0.00434749 7 0.703646 0.743410 -0.03976398 0.6835495 2.9561e-01 insignificant 1.00000 1.000000 insignificant 0.9448942 0.21492972 insignificant 1 1.00000 insignificant -0.00986798 0.776099 insignificant 1 insignificant 0.8285817 0.8108449 0.03508126 7 0.784300 0.7439259 0.0403743 2.3416e-02 9.7389e-01 weaklyHypermeth 1.6038e-01 1.0000e+00 insignificant 2.3609e-01 7.6108e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0045458 8.8889e-01 insignificant 1.0000e+00 insignificant 0.8287054 0.816309 -8.0520e-03 7 0.811263 0.827378 -0.0161153 8.0017e-01 2.5965e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7758e-01 1.2140e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.06732389 0.01673495 weaklyHypometh 0.418374 insignificant 0.8411690 0.8108449 0.04116300 7 0.787263 0.7439259 0.04333679 1.6605e-02 9.4114e-01 weaklyHypermeth 1.1861e-01 1.0000e+00 insignificant 5.8654e-02 9.7158e-01 insignificant 4.3128e-01 1.0000e+00 insignificant 5.3222e-03 8.8449e-01 insignificant 1.0000e+00 insignificant 0.8411690 0.816151 -0.00494063 7 0.787263 0.802718 -0.0154550 6.2328e-01 9.9636e-02 insignificant 1.0000e+00 1.000000 insignificant 6.9362e-01 1.3636e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0574559 0.0808590 insignificant 1.00000 insignificant 0.8108449 0.816151 -0.0338408 7 0.7439259 0.802718 -0.05879181 7.5025e-01 1.1471e-02 weaklyHypometh 1.0000e+00 9.6395e-02 weaklyHypometh 8.8822e-01 1.2894e-02 weaklyHypometh 1.0000e+00 1.5714e-01 insignificant -0.0627781 5.5144e-02 insignificant 5.6850e-01 insignificant chr4 6971879 6972879 15788 TBC1D14 ENSG00000132405 0.960000 89 5 0.8666298 113 5 0.7038095 49 5 0.9733333 86 5 0.728571 51 5 0.9469496 227 5 0.7046296 59 5 0.7895527 108 5 0.767163 78 5 0.9818182 45 5 0.772195 175 5 0.571429 31 1 0.7932264 75 5 0.9642857 53 4 0.9330952 60 5 0.9428571 25 1 1.000000 8 1 0.9640000 96 5 0.973333 97 5 0.9394715 196 5 0.933333 45 4 0.9251515 49 5 0.9728507 112 5 0.6714286 90 5 0.9206349 33 5 0.9315583 121 5 0.813640 64 4 0.609184 35 4 0.9500000 63 5 0.819141 133 5 0.952593 116 5 0.943921 195 5 0.9323455 128 5 0.9202797 39 5 1.000000 119 5 0.5666667 13 1 0.9525253 86 5 0.9453416 111 5 0.9684211 60 2 0.905042 72 5 0.9195402 66 2 0.9030702 63 2 0.990000 47 2 0.9420849 0.8433106 0.7372372 0.9615616 0.8090090 0.9141958 0.8379880 0.8752025 0.9257561 0.9746110 0.907500 0.777349 0.9590018 0.9429034 0.9221900 0.9202059 0.9677092 0.9468468 0.981982 0.927912 0.9069069 0.9344117 0.971057 0.9450450 0.8851709 0.9251797 0.7569642 0.900579 0.91141141 0.9330217 0.9324658 0.9280015 0.9351315 0.8854029 1.000000 0.8225624 0.941714 0.9185272 0.9559033 0.9060111 0.9356943 0.9081911 0.986036 2 0.912260 0.9280303 -0.01251862 5 0.770137 0.722309 0.04782825 0.7155754 3.6971e-01 insignificant 1.00000 1.000000 insignificant 0.6812773 0.68180296 insignificant 1 1.00000 insignificant -0.00646890 0.884772 lowCoverage 1 lowCoverage 0.9122603 0.9455645 -0.02374307 5 0.770137 0.8178604 -0.0477229 9.3443e-01 1.2795e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4289e-01 2.6479e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0223756 7.6047e-01 lowCoverage 1.0000e+00 lowCoverage 0.9169105 0.931818 -3.1018e-02 5 0.922637 0.930651 -0.0080139 6.0891e-01 1.2136e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7920e-01 4.7253e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant -0.07339719 0.03677411 lowCoverage 0.642190 lowCoverage 0.9280303 0.9455645 -0.01063411 5 0.722309 0.8178604 -0.09555119 8.6732e-01 3.2880e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7940e-01 4.4713e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -1.5907e-02 8.3393e-01 lowCoverage 1.0000e+00 lowCoverage 0.9358852 0.931818 -0.01447584 5 0.937900 0.930651 0.0072488 3.6862e-01 2.3460e-01 insignificant 1.0000e+00 1.000000 insignificant 9.7676e-01 1.3404e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0669283 0.1042675 lowCoverage 1.00000 lowCoverage 0.9473684 0.931818 -0.0054570 5 0.9450046 0.930651 0.01435378 4.7155e-01 5.6084e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4813e-01 3.6991e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0510216 4.7802e-01 lowCoverage 1.0000e+00 lowCoverage chr4 6993779 6994779 15790 TBC1D14 ENSG00000132405 0.772830 361 8 0.7324443 370 8 0.7118020 151 8 0.8314612 214 8 0.795833 394 8 0.8038154 367 8 0.6833395 293 8 0.7560195 323 8 0.800694 193 8 0.7805618 234 8 0.772299 537 8 0.720040 159 7 0.8076942 429 8 0.6945055 59 5 0.8027656 334 8 0.7839107 251 6 0.569883 174 5 0.7412892 213 8 0.801265 488 8 0.7840052 308 8 0.757694 159 8 0.8325466 97 8 0.7540400 200 8 0.7786190 158 8 0.8645833 80 7 0.8300068 343 8 0.791448 174 8 0.827679 63 4 0.7504936 428 8 0.820444 343 8 0.812619 298 8 0.783513 411 8 0.7974513 280 8 0.7520749 400 8 0.769481 125 6 0.7488095 51 8 0.7561768 185 8 0.7732375 295 8 0.8182585 291 8 0.826818 336 8 0.7814539 192 8 0.8106510 324 8 0.820282 218 8 0.7066005 0.6891807 0.6870994 0.7859441 0.7469665 0.7542223 0.6702024 0.6815983 0.7368873 0.7036861 0.702053 0.711647 0.7641512 0.6904879 0.7352206 0.7444198 0.5755576 0.6527609 0.735331 0.743612 0.6777892 0.7807403 0.765696 0.7470713 0.7928389 0.7444514 0.7426504 0.735769 0.70353205 0.7568241 0.7377104 0.7203099 0.7132328 0.6700700 0.703505 0.7207405 0.698497 0.6818467 0.7531388 0.7781521 0.6879196 0.7528177 0.785967 5 0.740943 0.7814089 -0.01729135 8 0.776456 0.791984 -0.01552807 0.9314229 2.6406e-02 weaklyHypometh 1.00000 0.977991 insignificant 0.9987081 0.00454917 weaklyHypometh 1 0.41076 insignificant -0.04298422 0.017490 weaklyHypometh 1 insignificant 0.7409433 0.7350299 0.01097077 8 0.776456 0.7781737 -0.0017180 9.5653e-03 1.4336e-01 weaklyHypermeth 6.8815e-02 1.0000e+00 weaklyHypermeth 8.6330e-02 1.9417e-01 insignificant 6.4426e-01 1.0000e+00 insignificant -0.0088822 5.6845e-01 insignificant 1.0000e+00 insignificant 0.7409433 0.796473 -3.4194e-02 8 0.776456 0.812074 -0.0356184 9.9454e-01 1.9326e-03 weaklyHypometh 1.0000e+00 1.4866e-01 insignificant 9.9980e-01 1.5511e-03 weaklyHypometh 1.0000e+00 0.14100789 insignificant -0.05416973 0.00220570 weaklyHypometh 0.182485 insignificant 0.7814089 0.7350299 0.02635230 8 0.791984 0.7781737 0.01381011 6.3108e-03 4.9049e-01 weaklyHypermeth 4.9691e-02 1.0000e+00 weaklyHypermeth 1.4911e-02 8.3305e-01 weaklyHypermeth 1.4619e-01 1.0000e+00 insignificant 3.4102e-02 1.7445e-02 weaklyHypermeth 2.6037e-01 insignificant 0.7814089 0.796473 -0.01636205 8 0.791984 0.812074 -0.0200904 8.0874e-01 6.2124e-02 insignificant 1.0000e+00 1.000000 insignificant 6.6853e-01 1.1796e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0111855 0.4102204 insignificant 1.00000 insignificant 0.7350299 0.796473 -0.0442684 8 0.7781737 0.812074 -0.03390048 7.0803e-01 5.0222e-04 weaklyHypometh 1.0000e+00 7.1746e-03 weaklyHypometh 9.0117e-01 6.1811e-02 insignificant 1.0000e+00 4.9515e-01 insignificant -0.0452876 2.5760e-03 weaklyHypometh 7.1557e-02 weaklyHypometh chr4 7011479 7012479 15793 TBC1D14 ENSG00000132405 0.760695 468 16 0.7516051 264 17 0.7169877 215 13 0.7491336 331 13 0.891955 139 12 0.7691913 482 16 0.8171210 196 12 0.7949428 203 12 0.807374 134 9 0.9176377 187 13 0.757557 352 13 0.820452 119 12 0.8468605 255 13 0.8809524 24 3 0.8129775 187 12 0.7047838 110 9 0.629307 405 13 0.8324918 349 14 0.774402 191 10 0.8117675 425 14 0.833761 89 8 0.7491719 129 7 0.8401560 299 16 0.7794167 138 12 0.8418797 83 8 0.7969554 308 16 0.837728 134 11 0.809301 108 10 0.6032908 165 12 0.801013 314 16 0.642675 283 16 0.857328 540 17 0.7334130 246 14 0.7024147 183 12 0.710652 312 15 0.7302083 112 9 0.7936616 141 12 0.7282218 313 17 0.8354182 314 14 0.842054 470 15 0.7757257 348 13 0.8220428 297 14 0.729672 328 13 0.8245499 0.8488621 0.7871875 0.8066733 0.8618279 0.8739155 0.8094959 0.8569029 0.7940181 0.9321209 0.869904 0.920755 0.9175456 0.8259463 0.8913080 0.7237914 0.7547179 0.7895534 0.880011 0.845247 0.8328834 0.8226618 0.848477 0.8127231 0.8662829 0.8674908 0.8541755 0.886515 0.79699253 0.8732376 0.8179963 0.8942046 0.7836832 0.6796247 0.706188 0.8528903 0.814446 0.8079542 0.8564065 0.8390629 0.8366862 0.8225508 0.831105 6 0.818110 0.8404173 -0.01280947 16 0.801731 0.779474 0.02225741 0.7366246 4.9270e-01 insignificant 1.00000 1.000000 insignificant 0.7488222 0.63142188 insignificant 1 1.00000 insignificant 0.00968667 0.731631 insignificant 1 insignificant 0.8181096 0.7536343 0.06425432 14 0.801731 0.7758996 0.0258317 9.9033e-05 9.9334e-01 weaklyHypermeth 1.0535e-03 1.0000e+00 weaklyHypermeth 5.7706e-03 9.9959e-01 weaklyHypermeth 6.6329e-02 1.0000e+00 weaklyHypermeth 0.0593145 8.1191e-03 weaklyHypermeth 1.4762e-01 insignificant 0.8181096 0.841116 9.4606e-05 13 0.801731 0.774420 0.0273116 8.9734e-01 1.9198e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.4688e-01 6.5617e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.00857282 0.75036254 insignificant 1.000000 insignificant 0.8404173 0.7536343 0.07642495 14 0.779474 0.7758996 0.00357425 3.1302e-05 9.7750e-01 weaklyHypermeth 3.9127e-04 1.0000e+00 weaklyHypermeth 4.4338e-03 9.9699e-01 weaklyHypermeth 5.0963e-02 1.0000e+00 weaklyHypermeth 4.9628e-02 8.3096e-02 insignificant 7.7111e-01 insignificant 0.8401544 0.841207 -0.00091533 13 0.767323 0.784228 -0.0169047 6.6446e-01 3.7028e-01 insignificant 1.0000e+00 1.000000 insignificant 8.7853e-01 4.4914e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0182595 0.5734903 insignificant 1.00000 insignificant 0.7536343 0.841116 -0.0730166 11 0.7758996 0.774420 0.00147991 9.9087e-01 7.7908e-04 weaklyHypometh 1.0000e+00 1.0672e-02 weaklyHypometh 9.9783e-01 7.3850e-03 weaklyHypometh 1.0000e+00 1.0755e-01 insignificant -0.0678873 3.0552e-02 weaklyHypometh 3.9987e-01 insignificant chr4 7024279 7025279 15794 TBC1D14 ENSG00000132405 0.843961 107 4 0.7468684 175 8 0.7079816 57 7 0.9424342 93 8 0.793080 70 6 0.9139135 146 8 0.6857143 66 5 0.9084980 84 5 0.728278 41 4 0.9055060 41 4 0.909009 227 8 0.542857 43 4 0.7279042 158 7 0.6750000 27 3 0.7812500 23 0 1.0000000 9 0 0.637500 12 1 0.9213564 59 4 0.851389 54 6 0.8870231 119 8 0.887500 46 7 1.0000000 19 1 0.7127841 57 5 0.8750000 69 6 0.9134804 63 7 0.8322587 198 7 0.875355 82 7 0.583333 12 0 0.7279942 67 4 0.899525 174 7 0.893944 202 8 0.872950 150 7 0.9137561 94 7 0.8436754 110 7 0.898965 119 4 0.9871795 42 3 0.7603069 132 8 0.9576389 145 7 0.8375000 59 6 0.953237 122 6 0.8459884 70 8 0.6658163 44 4 0.865575 100 7 0.8535421 0.7215792 0.7423077 0.9283806 0.7557234 0.8943084 0.6919414 0.8885985 0.7198052 0.8914835 0.902001 0.555934 0.7302367 0.6291473 0.7692308 0.9548993 0.7412632 0.8716487 0.829060 0.860197 0.8646154 0.9498530 0.634231 0.9128205 0.9019306 0.8743021 0.8934925 0.640737 0.75439005 0.9597568 0.9447005 0.8651893 0.9433258 0.8648660 0.892669 0.9848032 0.769198 0.9497680 0.8523077 0.9450595 0.8264159 0.6913004 0.906215 0 0.811684 0.8700615 -0.06081920 7 0.821864 0.862617 -0.04075270 0.5265458 3.0522e-03 weaklyHypometh 1.00000 0.222857 insignificant 0.5717889 0.05342828 insignificant 1 1.00000 insignificant -0.03403425 0.426939 insignificant 1 insignificant 0.8116843 0.8582555 -0.06391403 7 0.821864 0.8661009 -0.0442364 5.3483e-01 5.5308e-04 weaklyHypometh 1.0000e+00 5.0280e-02 weaklyHypometh 7.8389e-01 8.2215e-04 weaklyHypometh 1.0000e+00 1.0277e-01 insignificant -0.0881108 6.2429e-02 insignificant 6.5715e-01 insignificant 0.8116843 0.868354 -5.1718e-02 7 0.821864 0.865537 -0.0436729 9.3656e-01 7.2782e-03 weaklyHypometh 1.0000e+00 3.0097e-01 insignificant 9.0242e-01 7.4312e-02 insignificant 1.0000e+00 1.00000000 insignificant -0.02814717 0.61819906 insignificant 1.000000 insignificant 0.8700615 0.8582555 0.00041268 7 0.862617 0.8661009 -0.00348368 2.4875e-01 1.1049e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.2905e-01 4.5104e-02 inconclusive 1.0000e+00 1.0000e+00 insignificant -5.4077e-02 2.6528e-01 insignificant 1.0000e+00 insignificant 0.8700615 0.868354 -0.00174763 7 0.862617 0.865537 -0.0029202 5.4351e-01 2.3629e-01 insignificant 1.0000e+00 1.000000 insignificant 6.2496e-01 4.3307e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0058871 0.9199972 insignificant 1.00000 insignificant 0.8582555 0.868354 0.0083448 7 0.8661009 0.865537 0.00056348 2.6910e-01 2.3163e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.7645e-02 4.9644e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0599636 3.2886e-01 insignificant 1.0000e+00 insignificant chr4 7084579 7085579 15800 ENSG00000202392 0.943345 314 9 0.8518179 413 7 0.7071380 247 5 0.8993070 275 7 0.958105 134 5 0.9503401 507 7 0.9511487 196 5 0.9268557 244 7 0.848218 220 7 0.9089258 240 5 0.947449 393 9 0.795714 122 5 0.8552944 175 5 0.9056538 174 5 0.9094077 316 5 0.4761905 17 0 1.000000 6 0 0.6985232 274 7 0.881004 368 7 0.9368750 367 7 0.958612 108 6 0.8193651 121 5 0.9226442 223 7 0.8361495 139 7 0.6750000 34 4 0.9219365 212 9 0.770974 232 5 0.754273 106 5 0.8533749 337 7 0.925418 392 9 0.865546 317 7 0.956344 367 9 0.7134331 214 7 0.8396501 147 7 1.000000 96 2 0.7653061 36 4 0.7093262 237 5 0.9094486 267 7 0.8921351 308 7 0.910969 296 8 0.8813305 162 7 0.9394021 172 4 0.851146 248 7 0.9167819 0.7340907 0.6290163 0.9039824 0.9158817 0.9046998 0.9021188 0.8386682 0.8352810 0.9082325 0.900588 0.795326 0.7725074 0.8726654 0.8745964 0.2565284 0.9068254 0.6213783 0.854838 0.890231 0.8918748 0.8222369 0.894697 0.7105416 0.7073733 0.8665382 0.8291445 0.820330 0.75533239 0.8553767 0.8806054 0.9355902 0.8035675 0.8783069 NA 0.7034233 0.851772 0.8148713 0.9296825 0.8443119 0.9198949 0.8990795 0.793218 4 0.855458 0.8659196 -0.00577505 7 0.918166 0.847130 0.07103638 0.5756081 7.5745e-01 insignificant 1.00000 1.000000 insignificant 0.4776661 0.86724129 insignificant 1 1.00000 insignificant 0.01259581 0.737934 insignificant 1 insignificant 0.8554578 0.8605817 0.00832606 7 0.918166 0.8337169 0.0844492 7.8848e-02 6.3770e-01 insignificant 4.7787e-01 1.0000e+00 insignificant 1.6884e-01 7.9364e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0447050 4.3501e-01 insignificant 1.0000e+00 insignificant 0.8552842 0.886172 -3.2451e-02 7 0.899981 0.903074 -0.0030928 5.0244e-01 4.4046e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.9257e-01 4.7482e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.02743089 0.38358406 insignificant 1.000000 insignificant 0.8659196 0.8605817 0.01444546 7 0.847130 0.8337169 0.01341283 2.2086e-01 3.6301e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.3291e-01 7.1693e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.2109e-02 5.6735e-01 insignificant 1.0000e+00 insignificant 0.8669511 0.886172 -0.02329796 7 0.897815 0.903074 -0.0052589 6.5001e-01 3.5172e-01 insignificant 1.0000e+00 1.000000 insignificant 7.6280e-01 3.4667e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0400267 0.1952420 insignificant 1.00000 insignificant 0.8620342 0.886172 -0.0284176 7 0.8708392 0.903074 -0.03223441 5.0254e-01 3.0592e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.8182e-01 3.9202e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0721359 1.9665e-01 insignificant 1.0000e+00 insignificant chr4 7176779 7177779 15803 ENSG00000200867 0.672653 320 11 0.7085033 285 11 0.6814839 223 11 0.6447289 250 11 0.691966 119 11 0.7238834 555 11 0.7202911 166 11 0.6589268 272 12 0.588075 230 11 0.7424008 193 11 0.783339 416 13 0.728963 133 11 0.7661218 235 9 0.7599603 103 7 0.6981240 218 9 0.6625313 87 6 0.722285 65 5 0.7800426 321 11 0.761750 228 11 0.6822515 464 11 0.710012 74 5 0.6566084 134 9 0.6732638 173 11 0.7396215 150 9 0.6234491 109 9 0.7052527 425 11 0.783898 108 8 0.694494 122 8 0.6255260 158 7 0.658621 388 11 0.714631 409 11 0.690684 550 11 0.6473128 263 11 0.4646969 163 11 0.614100 353 11 0.8503527 52 5 0.6784626 234 9 0.6814890 367 11 0.6414355 287 11 0.642028 368 11 0.6764058 278 11 0.7945788 303 8 0.624905 333 11 0.7923166 0.7812069 0.7367244 0.7873828 0.8006567 0.8192312 0.8010411 0.7718911 0.7081727 0.7891013 0.873411 0.799229 0.8077250 0.7831064 0.8169369 0.8444574 0.8068632 0.8293919 0.849287 0.770770 0.8054444 0.7017318 0.756710 0.8403994 0.7350861 0.7938302 0.8312168 0.812155 0.71994553 0.7779818 0.7812198 0.7826868 0.6920110 0.5353380 0.729585 0.8469807 0.695426 0.7285779 0.7376351 0.7822443 0.7870423 0.7908180 0.744223 6 0.755069 0.7364286 0.01992177 11 0.710375 0.690355 0.02001958 0.0874049 8.6377e-01 insignificant 1.00000 1.000000 insignificant 0.3246482 0.63426245 insignificant 1 1.00000 insignificant 0.01924221 0.280368 insignificant 1 insignificant 0.7550686 0.6864525 0.08551155 11 0.710375 0.6576405 0.0527345 2.0228e-07 9.4696e-01 weaklyHypermeth 2.8490e-06 1.0000e+00 weaklyHypermeth 1.3996e-03 9.4140e-01 weaklyHypermeth 1.9439e-02 1.0000e+00 weaklyHypermeth 0.0528451 3.5217e-01 insignificant 1.0000e+00 insignificant 0.7541969 0.673678 4.8836e-02 11 0.689101 0.640575 0.0485266 1.0159e-05 6.0086e-01 weaklyHypermeth 4.8375e-04 1.0000e+00 weaklyHypermeth 1.4262e-03 5.5903e-01 weaklyHypermeth 7.5061e-02 1.00000000 weaklyHypermeth 0.03304346 0.35925846 insignificant 1.000000 insignificant 0.7364286 0.6864525 0.06339591 11 0.690355 0.6576405 0.03271487 5.1126e-04 8.7704e-01 weaklyHypermeth 5.1721e-03 1.0000e+00 weaklyHypermeth 5.0406e-02 9.3767e-01 insignificant 3.7741e-01 1.0000e+00 insignificant 3.3603e-02 5.4700e-01 insignificant 1.0000e+00 insignificant 0.7349005 0.673678 0.03206960 11 0.660671 0.640575 0.0200966 1.3306e-04 3.6378e-01 weaklyHypermeth 5.5443e-03 1.000000 weaklyHypermeth 4.2977e-02 9.5406e-01 weaklyHypermeth 8.4660e-01 1.000000 insignificant 0.0138012 0.6966086 insignificant 1.00000 insignificant 0.6836158 0.673678 -0.0434419 11 0.6044843 0.640575 -0.03609035 4.6777e-01 2.6971e-03 weaklyHypometh 1.0000e+00 2.9968e-02 weaklyHypometh 6.9203e-01 3.1487e-02 weaklyHypometh 1.0000e+00 2.9227e-01 insignificant -0.0198016 7.4746e-01 insignificant 1.0000e+00 insignificant chr4 7207779 7208779 15805 ENSG00000200867 0.900295 308 5 0.6751443 182 4 0.3776882 65 2 0.9017757 297 5 0.906818 23 2 0.9045437 326 5 0.6250000 20 2 0.7569444 98 2 0.943376 55 2 0.9125000 42 2 0.899701 117 4 0.916667 8 0 0.8444444 38 2 0.8340909 42 2 0.6356421 44 2 1.0000000 4 0 1.000000 1 0 0.4995271 533 5 0.753418 205 5 0.8401310 261 5 0.887464 53 2 0.8333333 6 0 0.8295760 166 6 0.6312271 46 4 0.9090909 23 2 0.7727143 217 6 0.661078 105 2 1.000000 14 2 0.9136288 139 2 0.668678 202 6 0.807605 250 6 0.912175 277 5 0.3665094 128 4 0.0771037 231 2 0.607143 211 6 0.1025641 128 5 0.4270311 98 4 0.0878786 285 6 0.8737883 204 5 0.877514 240 6 0.8579001 278 5 0.8747263 333 5 0.826959 262 6 0.9023078 0.7092437 0.7569049 0.9376926 0.8153298 0.9425265 0.7500000 0.8893246 0.8867102 0.8274510 0.862525 0.836601 0.8453159 0.8344029 0.9534844 1.0000000 NA 0.6424396 0.883891 0.909428 0.8881627 0.8366013 0.903913 0.6288515 0.8663102 0.8598956 0.8228989 1.000000 0.91359228 0.8964821 0.9158744 0.9079032 0.3866075 0.1543071 1.000000 0.0000000 0.256507 0.1571860 0.9041589 0.9194897 0.9558648 0.9333148 0.883855 1 0.819580 0.8517034 -0.03413435 5 0.815580 0.809948 0.00563148 0.7680169 4.5398e-01 insignificant 1.00000 1.000000 insignificant 0.6040260 0.89328599 insignificant 1 1.00000 insignificant -0.01249557 0.805116 lowCoverage 1 lowCoverage 0.8192726 0.2451434 0.55406267 5 0.744151 0.3493408 0.3948102 5.8653e-21 1.0000e+00 hypermethylated 1.8329e-19 1.0000e+00 hypermethylated 1.4419e-06 9.9998e-01 hypermethylated 3.6047e-05 1.0000e+00 hypermethylated 0.5283470 1.1154e-03 lowCoverage 3.0146e-02 lowCoverage 0.8192726 0.884586 -8.2557e-02 5 0.744151 0.879989 -0.1358380 9.9559e-01 6.5828e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.2349e-01 3.1781e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.05579213 0.16200188 lowCoverage 1.000000 lowCoverage 0.8516043 0.2444444 0.58309713 5 0.778273 0.2408976 0.53737518 1.0719e-18 1.0000e+00 hypermethylated 3.5731e-17 1.0000e+00 hypermethylated 3.5591e-07 1.0000e+00 hypermethylated 1.1122e-05 1.0000e+00 hypermethylated 5.4084e-01 1.0979e-03 lowCoverage 2.7447e-02 lowCoverage 0.8516043 0.884498 -0.05087829 5 0.778273 0.859987 -0.0817144 9.9920e-01 4.8060e-03 weaklyHypometh 1.0000e+00 0.320402 insignificant 9.9863e-01 2.8200e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.0432966 0.2368103 lowCoverage 1.00000 lowCoverage 0.2451434 0.884586 -0.6472877 5 0.3493408 0.879989 -0.53064818 1.0000e+00 3.2890e-17 hypomethylated 1.0000e+00 2.0556e-15 hypomethylated 1.0000e+00 1.8419e-05 hypomethylated 1.0000e+00 6.3513e-04 hypomethylated -0.5841392 1.2553e-03 lowCoverage 4.3286e-02 lowCoverage chr4 7208379 7209379 15806 ENSG00000200867 0.861944 469 8 0.7073504 226 7 0.5385900 75 5 0.8835436 463 8 0.842857 29 2 0.8655053 409 8 0.4646465 43 4 0.7023395 117 5 0.888711 71 5 0.8517094 66 5 0.870956 175 7 0.857143 22 3 0.8538041 122 5 0.8500000 20 1 0.6757576 59 5 0.9375000 14 0 0.846970 39 3 0.6100545 628 8 0.824923 195 8 0.8277957 328 8 0.839666 77 5 0.8166165 67 4 0.8244072 231 9 0.6916736 94 6 0.8916040 83 5 0.8010370 300 9 0.754238 126 5 0.835544 37 4 0.8734983 177 5 0.733595 288 9 0.803090 286 9 0.916907 386 8 0.2885824 179 7 0.1207720 207 5 0.463814 503 9 0.2680912 145 7 0.4217762 118 7 0.1810671 332 9 0.8494163 237 8 0.828722 404 9 0.8531558 409 8 0.8656106 389 8 0.852740 282 9 0.7903287 0.7120906 0.7588573 0.8518327 0.7531746 0.8180614 0.4236612 0.7225767 0.8390332 0.7777913 0.831433 0.771429 0.8547993 NA 0.7874459 0.9258714 0.8371353 0.7506467 0.879192 0.788883 0.8199856 0.7994033 0.800315 0.6895425 0.8582468 0.8515331 0.8464486 0.774943 0.86511774 0.8116790 0.8327782 0.8931891 0.2683185 0.1788376 0.522642 0.3769841 0.347355 0.3027174 0.9134035 0.8738771 0.8489813 0.8767763 0.865017 4 0.795346 0.8289168 -0.03405625 8 0.822357 0.829272 -0.00691500 0.9763292 1.2931e-01 insignificant 1.00000 1.000000 insignificant 0.9171731 0.61757979 insignificant 1 1.00000 insignificant -0.02705143 0.435871 insignificant 1 insignificant 0.7951233 0.2924528 0.48511409 8 0.776902 0.3202178 0.4566844 1.4154e-37 1.0000e+00 hypermethylated 8.8460e-36 1.0000e+00 hypermethylated 2.4833e-14 1.0000e+00 hypermethylated 1.9102e-12 1.0000e+00 hypermethylated 0.4974212 3.9986e-05 hypermethylated 1.9041e-03 hypermethylated 0.7951233 0.859965 -7.6006e-02 8 0.776902 0.861989 -0.0850864 9.8176e-01 1.3723e-02 weaklyHypometh 1.0000e+00 4.0362e-01 insignificant 8.9415e-01 1.2840e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.06182384 0.04690645 weaklyHypometh 0.781774 insignificant 0.8288372 0.2919757 0.51348889 8 0.812199 0.2522396 0.55995937 1.3486e-34 1.0000e+00 hypermethylated 1.0374e-32 1.0000e+00 hypermethylated 1.1626e-15 1.0000e+00 hypermethylated 1.6609e-13 1.0000e+00 hypermethylated 5.2447e-01 7.8600e-05 hypermethylated 3.2750e-03 hypermethylated 0.8288372 0.859884 -0.04170995 8 0.812199 0.848187 -0.0359885 8.9907e-01 7.3572e-03 weaklyHypometh 1.0000e+00 0.368776 insignificant 9.5201e-01 6.0646e-02 insignificant 1.0000e+00 1.000000 insignificant -0.0347724 0.1015056 insignificant 1.00000 insignificant 0.2924528 0.859965 -0.5720996 8 0.3202178 0.861989 -0.54177079 1.0000e+00 2.9559e-27 hypomethylated 1.0000e+00 3.6474e-25 hypomethylated 1.0000e+00 5.1733e-11 hypomethylated 1.0000e+00 5.7482e-09 hypomethylated -0.5592451 1.3337e-04 hypomethylated 8.3356e-03 hypomethylated chr4 7259579 7260579 15808 SORCS2 ENSG00000184985 0.474327 51 5 0.4319853 84 5 0.4806320 117 5 0.3724490 63 5 0.472944 65 5 0.5812857 113 5 0.4275132 44 5 0.5675458 111 5 0.460283 65 5 0.7284125 113 5 0.665894 163 5 0.775694 55 3 0.3106410 119 5 0.5537098 96 5 0.5538826 129 5 0.3719048 51 3 0.200000 7 0 0.1937720 111 5 0.390886 121 5 0.3785438 95 5 0.663530 66 5 0.1092130 111 5 0.6169862 53 5 0.4115646 86 5 0.4121212 50 5 0.3639047 152 5 0.511571 221 5 0.187646 58 5 0.4142130 137 5 0.253784 202 5 0.186111 183 5 0.783905 114 5 0.0074074 129 5 0.0133333 100 5 0.044444 186 5 0.0000000 23 3 0.0170068 141 5 0.0052632 173 5 0.1865942 82 4 0.303704 65 5 0.0615385 42 3 0.2133700 45 3 0.212727 48 5 0.5357769 0.3884143 0.4024914 0.4589393 0.3471110 0.5157008 0.2386655 0.5683907 0.3385597 0.6634570 0.685346 0.724975 0.1466053 0.5338301 0.4456938 0.4362703 0.4771963 0.2033044 0.420822 0.342940 0.7707372 0.1012794 0.660402 0.6281247 0.3881328 0.3217524 0.3710157 0.184959 0.46093646 0.2387940 0.1767631 0.7717993 0.0099800 0.0079840 0.026613 0.0077179 0.027089 0.0064608 0.1766576 0.1320027 0.0755412 0.0792645 0.202613 3 0.464185 0.3939818 0.06918216 5 0.437729 0.392490 0.04523859 0.1213968 9.4858e-01 insignificant 1.00000 1.000000 insignificant 0.4932253 0.86518629 insignificant 1 1.00000 insignificant 0.06006942 0.395461 lowCoverage 1 lowCoverage 0.4641850 0.0119681 0.45038339 5 0.437729 0.0091924 0.4285365 3.6263e-20 1.0000e+00 hypermethylated 1.0666e-18 1.0000e+00 hypermethylated 1.2702e-11 1.0000e+00 hypermethylated 7.8641e-10 1.0000e+00 hypermethylated 0.4550394 2.5238e-11 lowCoverage 5.0476e-09 lowCoverage 0.4641850 0.148936 3.0697e-01 5 0.437729 0.261858 0.1758705 2.9066e-09 9.9902e-01 hypermethylated 2.6423e-07 1.0000e+00 hypermethylated 1.1350e-06 9.9978e-01 hypermethylated 1.2442e-04 1.00000000 hypermethylated 0.27402852 0.00024605 lowCoverage 0.061513 lowCoverage 0.3939818 0.0119681 0.37772026 5 0.392490 0.0091924 0.38329786 2.0487e-10 9.9997e-01 hypermethylated 4.6562e-09 1.0000e+00 hypermethylated 5.0280e-10 1.0000e+00 hypermethylated 2.6292e-08 1.0000e+00 hypermethylated 3.9497e-01 3.6887e-05 lowCoverage 1.6767e-03 lowCoverage 0.3939818 0.148936 0.23122564 5 0.392490 0.261858 0.1306319 1.9665e-04 9.9090e-01 hypermethylated 7.2832e-03 1.000000 hypermethylated 3.1559e-05 9.9937e-01 hypermethylated 3.1559e-03 1.000000 hypermethylated 0.2139591 0.0091223 lowCoverage 0.53435 lowCoverage 0.0119681 0.148936 -0.1346789 5 0.0091924 0.261858 -0.25266592 1.0000e+00 4.1041e-07 weaklyHypometh 1.0000e+00 1.0800e-05 weaklyHypometh 9.9995e-01 3.8137e-04 weaklyHypometh 1.0000e+00 9.5342e-03 weaklyHypometh -0.1810109 8.9409e-03 lowCoverage 1.6299e-01 lowCoverage chr4 7270379 7271379 15810 SORCS2 ENSG00000184985 0.752829 285 8 0.8256517 245 8 0.9109668 43 4 0.8382465 280 8 0.822222 38 2 0.8003158 372 8 0.5452652 47 4 0.8464135 199 8 0.834375 101 8 0.9368421 60 7 0.875854 336 8 0.781250 19 1 0.8610630 194 8 0.9000000 26 1 0.8172619 88 6 0.6166667 19 1 1.000000 14 2 0.8832945 311 6 0.873693 220 8 0.8331886 329 8 0.828814 132 8 0.7014665 168 8 0.8178714 164 8 0.8217844 93 7 0.9136823 78 5 0.8592968 302 8 0.861355 147 7 0.469697 33 2 0.8596678 251 7 0.900807 340 8 0.860906 345 8 0.927802 373 8 0.6219900 174 8 0.7235495 157 8 0.655423 109 4 0.8916667 24 2 0.5851515 116 8 0.6956081 336 8 0.5953749 188 8 0.570258 329 8 0.8430633 178 6 0.6623023 151 8 0.658674 268 6 0.7989049 0.8334843 0.8470272 0.8655208 0.9025044 0.8590415 0.6404356 0.8807211 0.8394748 0.9588816 0.870167 0.800781 0.9099030 0.8083850 0.8589100 0.4870595 0.9660240 0.8838372 0.885153 0.857117 0.7774580 0.7506531 0.830493 0.8981969 0.8308081 0.8841949 0.8609703 0.572325 0.86855539 0.9034305 0.8560804 0.9108901 0.6797775 0.6540333 0.834308 0.9171579 0.660672 0.8131283 0.6938995 0.6332488 0.8396723 0.6693717 0.777876 2 0.842219 0.8468208 -0.01062138 8 0.849687 0.827207 0.02247971 0.7630277 1.7979e-01 insignificant 1.00000 1.000000 insignificant 0.3201035 0.64661734 insignificant 1 1.00000 insignificant 0.00917418 0.831268 insignificant 1 insignificant 0.8421216 0.6535519 0.15498153 8 0.830897 0.6606318 0.1702656 1.4274e-10 9.7992e-01 weaklyHypermeth 2.6432e-09 1.0000e+00 weaklyHypermeth 1.5593e-03 7.7285e-01 weaklyHypermeth 2.1360e-02 1.0000e+00 weaklyHypermeth 0.1322052 2.9134e-02 weaklyHypermeth 3.6705e-01 insignificant 0.8422195 0.749551 1.3846e-01 8 0.849687 0.642498 0.2071885 2.0347e-12 9.8810e-01 weaklyHypermeth 3.3912e-10 1.0000e+00 weaklyHypermeth 1.6942e-04 9.9926e-01 weaklyHypermeth 1.3033e-02 1.00000000 weaklyHypermeth 0.16183539 0.02241476 weaklyHypermeth 0.521274 insignificant 0.8471706 0.6539301 0.18807934 8 0.864244 0.6983394 0.16590455 2.8830e-10 9.7405e-01 weaklyHypermeth 6.4066e-09 1.0000e+00 weaklyHypermeth 6.5933e-03 8.0235e-01 weaklyHypermeth 6.9403e-02 1.0000e+00 weaklyHypermeth 1.2303e-01 5.2444e-02 insignificant 5.7631e-01 insignificant 0.8468208 0.749551 0.14909727 8 0.827207 0.642498 0.1847088 6.6620e-13 9.9726e-01 weaklyHypermeth 1.6655e-10 1.000000 weaklyHypermeth 1.6899e-04 9.9913e-01 weaklyHypermeth 1.4083e-02 1.000000 weaklyHypermeth 0.1526612 0.0314830 weaklyHypermeth 0.95403 insignificant 0.6535519 0.750000 0.0197788 8 0.6606318 0.660310 0.00032147 2.8889e-01 2.5311e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.1134e-01 7.4397e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0296302 6.5976e-01 insignificant 1.0000e+00 insignificant chr4 7380879 7381879 15811 SORCS2 ENSG00000184985 0.839048 286 7 0.5747070 207 7 0.7079493 150 8 0.8381625 332 7 0.911085 125 8 0.8108104 382 7 0.7294709 158 7 0.7622333 199 8 0.764826 184 8 0.7608167 168 8 0.864171 262 8 0.698661 58 4 0.6983890 201 8 0.7959164 95 6 0.8538453 181 8 0.8110119 63 4 0.825000 60 4 0.5521915 360 7 0.775446 171 7 0.7363718 280 7 0.922731 124 8 0.7992365 128 5 0.8011215 163 8 0.9094968 108 6 0.7800338 184 5 0.7336466 229 8 0.872548 121 8 0.619975 76 5 0.7773352 164 6 0.724505 219 7 0.643053 208 8 0.830224 263 7 0.2448221 307 8 0.1768718 210 8 0.404429 156 6 0.3000000 118 4 0.2806729 196 8 0.2840278 275 8 0.8119187 343 7 0.812143 294 7 0.8013444 230 7 0.7943267 319 7 0.712839 314 7 0.8503262 0.7297270 0.7406710 0.8606909 0.9263196 0.8597895 0.8187584 0.7925454 0.7402221 0.8615646 0.853921 0.833730 0.5864320 0.7781745 0.8052684 0.7835450 0.8435979 0.6096429 0.765809 0.747969 0.9291005 0.7858963 0.822984 0.9010823 0.7116988 0.7089202 0.8477916 0.674504 0.74406264 0.7141543 0.7197059 0.8854163 0.1191178 0.0937518 0.096744 0.1710053 0.166155 0.0958730 0.8099216 0.7773542 0.7722344 0.8343617 0.664569 5 0.797449 0.7901673 0.01322070 8 0.670145 0.751937 -0.08179209 0.5805674 9.1004e-01 insignificant 1.00000 1.000000 insignificant 0.6765390 0.79676004 insignificant 1 1.00000 insignificant -0.01898652 0.581438 insignificant 1 insignificant 0.7974490 0.1584786 0.66419655 8 0.670145 0.2758740 0.3942710 6.4071e-51 9.9999e-01 hypermethylated 6.4071e-49 1.0000e+00 hypermethylated 1.4819e-11 1.0000e+00 hypermethylated 8.2329e-10 1.0000e+00 hypermethylated 0.4837017 1.3196e-07 hypermethylated 1.0846e-05 hypermethylated 0.7983129 0.789333 1.0827e-03 7 0.796449 0.817809 -0.0213599 9.0751e-01 2.9130e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.1322e-01 5.5508e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.02100859 0.45736058 insignificant 1.000000 insignificant 0.7901673 0.1584786 0.65356769 8 0.751937 0.2758740 0.47606311 1.9517e-36 1.0000e+00 hypermethylated 1.6264e-34 1.0000e+00 hypermethylated 6.9249e-10 1.0000e+00 hypermethylated 3.2976e-08 1.0000e+00 hypermethylated 5.0269e-01 2.2037e-08 hypermethylated 2.4486e-06 hypermethylated 0.7900356 0.789333 -0.00896703 7 0.783913 0.817809 -0.0338958 9.6182e-01 2.3817e-01 insignificant 1.0000e+00 1.000000 insignificant 8.1980e-01 5.9704e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0020221 0.9521150 insignificant 1.00000 insignificant 0.1580620 0.789333 -0.6609899 7 0.2543267 0.817809 -0.56348258 1.0000e+00 9.2906e-28 hypomethylated 1.0000e+00 1.3272e-25 hypomethylated 1.0000e+00 1.0156e-07 hypomethylated 1.0000e+00 6.7706e-06 hypomethylated -0.5047103 5.6851e-07 hypomethylated 1.1370e-04 hypomethylated chr4 7944479 7945479 15821 AFAP1 ENSG00000196526 0.859221 139 4 0.7592355 147 4 0.7542017 70 5 0.9300335 146 4 0.841818 55 5 0.9231982 174 5 0.9039061 78 5 0.8051929 79 4 0.633636 55 3 0.3909722 37 2 0.855070 150 5 0.757778 28 4 0.7101047 65 4 0.8750000 14 1 0.6442547 63 4 0.7083333 20 3 0.514404 920 4 0.6015152 108 3 0.771607 61 4 0.8311045 134 5 0.674908 32 2 0.6807792 60 3 0.8848364 104 5 0.9692308 49 4 0.8524138 80 4 0.8843487 167 4 0.868571 36 3 0.858586 28 3 0.9150000 39 3 0.871166 174 5 0.918091 168 4 0.709269 170 5 0.4798544 126 5 0.6987179 45 4 0.540476 110 5 0.5270833 110 4 0.6568031 83 4 0.4872958 165 5 0.7145933 178 4 0.553919 172 4 0.6611312 163 4 0.6587763 102 4 0.757530 192 4 0.7965384 0.6699585 0.6890942 0.8927614 0.7592920 0.9063299 0.9228493 0.8175678 0.6602977 0.4211283 0.793587 0.624975 0.6450985 0.7285761 0.6291293 0.6312684 0.4260164 0.5750872 0.719451 0.803306 0.6380434 0.5032180 0.778914 0.9795779 0.7789238 0.8924012 0.7955752 0.842446 0.87136755 0.8514609 0.8763370 0.8220672 0.2962458 0.6044929 0.341340 0.3937316 0.460803 0.3569213 0.6323835 0.6194933 0.7967791 0.5599085 0.612102 2 0.797797 0.8419151 -0.07021726 5 0.820514 0.839411 -0.01889640 0.9827606 2.0465e-04 weaklyHypometh 1.00000 0.068218 weaklyHypometh 0.9955565 0.00549466 weaklyHypometh 1 0.42267 insignificant -0.08707078 0.048272 lowCoverage 1 lowCoverage 0.7977970 0.6181534 0.17877487 4 0.820514 0.5947003 0.2258139 1.1047e-12 1.2959e-01 lowCoverage 2.5690e-11 1.0000e+00 lowCoverage 2.7906e-04 5.8498e-01 lowCoverage 4.7298e-03 1.0000e+00 lowCoverage 0.1884909 1.9679e-03 lowCoverage 4.5766e-02 lowCoverage 0.7976378 0.706320 1.3628e-02 4 0.784617 0.633643 0.1509744 1.4217e-04 8.4306e-03 lowCoverage 6.1814e-03 3.0097e-01 lowCoverage 3.2136e-02 1.6531e-01 lowCoverage 6.8375e-01 1.00000000 lowCoverage 0.08433935 0.09484454 lowCoverage 1.000000 lowCoverage 0.8419151 0.6181534 0.31992743 4 0.839411 0.5947003 0.24471026 3.6450e-12 9.7705e-01 lowCoverage 9.1126e-11 1.0000e+00 lowCoverage 9.3739e-05 9.7689e-01 lowCoverage 1.9130e-03 1.0000e+00 lowCoverage 2.7556e-01 1.1306e-04 lowCoverage 4.5226e-03 lowCoverage 0.8422484 0.706320 0.14193920 4 0.857293 0.633643 0.2236501 4.0033e-05 7.4329e-01 lowCoverage 2.0017e-03 1.000000 lowCoverage 3.9227e-03 8.0625e-01 lowCoverage 1.5087e-01 1.000000 lowCoverage 0.1714101 0.0032986 lowCoverage 0.40961 lowCoverage 0.6175549 0.706320 -0.1538167 4 0.5136404 0.633643 -0.12000223 9.7707e-01 1.1202e-04 lowCoverage 1.0000e+00 1.8987e-03 lowCoverage 9.5843e-01 7.2499e-03 lowCoverage 1.0000e+00 1.0755e-01 lowCoverage -0.1041515 6.9405e-02 lowCoverage 6.5297e-01 lowCoverage chr4 8017379 8018379 15830 AFAP1 ENSG00000196526 0.931265 459 8 0.8445964 470 8 0.8668204 131 9 0.9702936 391 8 0.880051 161 8 0.8638356 470 9 0.7672399 194 5 0.9253235 301 8 0.820080 181 8 0.9126472 154 8 0.895029 474 9 0.826211 48 2 0.8898183 248 9 0.8712218 95 5 0.8847831 243 8 0.9259259 34 5 1.000000 15 2 0.9050572 523 8 0.888299 457 8 0.9351623 494 9 0.895869 153 9 0.9027778 36 3 0.8890167 284 8 0.9107143 93 8 0.9687500 32 3 0.9099370 522 9 0.877836 253 8 0.860494 79 5 0.9078960 457 8 0.911745 553 9 0.911136 528 9 0.881335 459 9 0.8515206 331 8 0.9835381 299 8 1.000000 178 3 1.0000000 19 3 0.9424858 149 8 0.9378393 564 9 0.9390303 445 5 0.921076 445 8 0.8404742 376 5 0.8999788 689 8 0.933730 323 8 0.9104794 0.8609745 0.8474833 0.9558385 0.8717427 0.8824641 0.8058032 0.8960257 0.8128585 0.9009295 0.896125 0.874117 0.8972311 0.8688669 0.8517014 0.9264632 0.9595679 0.8714112 0.866950 0.933633 0.8904631 0.9449177 0.873282 0.9248360 0.9489796 0.9186378 0.8172505 0.932256 0.87150618 0.9244138 0.9111658 0.9121721 0.8881420 0.9771229 0.966457 0.9448874 0.945807 0.9268207 0.9199463 0.8910361 0.8723425 0.8725757 0.902652 5 0.896228 0.9037402 -0.01226578 8 0.887353 0.901738 -0.01438582 0.8929807 5.8088e-02 insignificant 1.00000 1.000000 insignificant 0.9625662 0.03716028 weaklyHypometh 1 1.00000 insignificant -0.01210924 0.397837 insignificant 1 insignificant 0.8962281 0.9409091 -0.04392110 8 0.887353 0.9244864 -0.0371338 9.9752e-01 1.6101e-04 weaklyHypometh 1.0000e+00 1.7890e-02 weaklyHypometh 9.9932e-01 1.5822e-03 weaklyHypometh 1.0000e+00 1.7581e-01 insignificant -0.0623809 4.3523e-02 weaklyHypometh 5.1204e-01 insignificant 0.8962281 0.919666 -1.2649e-02 8 0.887353 0.918472 -0.0311193 9.7711e-01 2.2387e-03 weaklyHypometh 1.0000e+00 1.5005e-01 insignificant 9.5588e-01 1.9352e-02 weaklyHypometh 1.0000e+00 0.66732717 insignificant -0.01667495 0.45992987 insignificant 1.000000 insignificant 0.9037402 0.9409091 -0.03313268 8 0.901738 0.9244864 -0.02274794 9.8370e-01 1.3628e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9343e-01 2.0165e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -5.0272e-02 8.3280e-02 insignificant 7.7111e-01 insignificant 0.9037402 0.919666 0.00370066 8 0.901738 0.918472 -0.0167334 5.5537e-01 3.1257e-02 inconclusive 1.0000e+00 1.000000 insignificant 4.3470e-01 1.8812e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0045657 0.8230991 insignificant 1.00000 insignificant 0.9409091 0.919666 0.0307487 8 0.9244864 0.918472 0.00601450 1.0023e-01 6.1534e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.3948e-02 7.5786e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0457060 1.5281e-01 insignificant 1.0000e+00 insignificant chr4 8233879 8234879 15835 ABLIM2 ENSG00000163995 0.816667 38 6 0.6119048 57 5 0.5763889 44 2 0.6052503 44 5 0.676768 18 1 0.5768446 149 6 0.3629630 34 4 0.6759590 77 6 0.328571 21 2 0.7857143 30 4 0.779275 158 6 0.354167 11 0 0.6311057 86 6 0.5907407 47 4 0.5848214 42 4 0.0000000 7 1 0.000000 2 0 0.6148810 42 6 0.869245 128 6 0.6478001 78 6 0.716759 77 6 0.5865041 46 4 0.5743590 36 3 0.5732323 58 4 0.8395220 97 6 0.7668721 170 6 0.759827 100 6 0.549451 25 2 0.8326406 119 6 0.720022 152 6 0.715868 153 6 0.800649 80 5 0.6776896 60 6 0.7076389 138 6 0.691145 260 5 0.4166667 20 2 0.7277778 95 5 0.6912164 198 6 0.3564626 37 4 0.573046 57 6 0.3172327 66 6 0.2489087 60 6 0.482012 62 5 0.8174129 0.5423596 0.6523632 0.5933519 0.7634555 0.5987986 0.3283582 0.7398543 0.3973713 0.6890547 0.770688 0.278097 0.6020563 0.6820066 0.6836354 0.3512400 NA 0.4974058 0.834436 0.654887 0.7595867 0.5981924 0.665557 0.6356852 0.7881254 0.7289508 0.7540477 0.536092 0.73549126 0.6995326 0.6669817 0.7800317 0.5935797 0.7038557 0.559406 0.2761194 0.765174 0.6752613 0.3894812 0.5510995 0.3300692 0.2127754 0.584452 1 0.655885 0.7322552 -0.07337203 5 0.640379 0.745217 -0.10483808 0.9925600 2.5406e-02 weaklyHypometh 1.00000 0.977158 insignificant 0.9977929 0.06146170 insignificant 1 1.00000 insignificant -0.14852220 0.022000 lowCoverage 1 lowCoverage 0.6558559 0.6952010 -0.01545375 5 0.636624 0.6256971 0.0109268 3.2157e-01 5.2406e-03 weaklyHypometh 1.0000e+00 3.2754e-01 insignificant 5.6918e-01 2.1335e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0975691 1.8816e-01 lowCoverage 1.0000e+00 lowCoverage 0.6558850 0.436170 2.3982e-01 5 0.640379 0.324177 0.3162024 9.9751e-06 9.9999e-01 hypermethylated 4.8375e-04 1.0000e+00 hypermethylated 3.6139e-03 9.9999e-01 weaklyHypermeth 1.5750e-01 1.00000000 insignificant 0.15892079 0.06765200 lowCoverage 0.940589 lowCoverage 0.7315315 0.6952010 0.05605794 6 0.708820 0.6256971 0.08312267 9.5308e-02 1.5604e-01 insignificant 5.6064e-01 1.0000e+00 insignificant 1.7788e-01 5.3368e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.0953e-02 3.9057e-01 insignificant 1.0000e+00 insignificant 0.7322552 0.436170 0.30491669 6 0.745217 0.324177 0.4210405 6.6596e-11 1.0000e+00 hypermethylated 1.1099e-08 1.000000 hypermethylated 6.8581e-06 1.0000e+00 hypermethylated 1.1430e-03 1.000000 hypermethylated 0.3074430 0.0030051 weaklyHypermeth 0.40961 insignificant 0.6952010 0.437722 0.2602863 6 0.6256971 0.370488 0.25520935 7.9650e-07 9.9997e-01 hypermethylated 9.9562e-05 1.0000e+00 hypermethylated 2.9341e-03 9.9924e-01 weaklyHypermeth 2.9341e-01 1.0000e+00 insignificant 0.2564899 8.9645e-03 weaklyHypermeth 1.6299e-01 insignificant chr4 8267279 8268279 15837 SH3TC1 ENSG00000125089 0.817447 367 12 0.6793593 423 10 0.7529129 358 10 0.7783965 329 11 0.717433 208 10 0.8110121 562 12 0.7908289 465 10 0.7691934 335 10 0.773079 284 10 0.8190918 276 10 0.835443 606 10 0.831776 308 10 0.7748587 208 10 0.8721025 118 7 0.8405286 287 10 0.7802540 369 10 0.917908 179 4 0.5487669 401 11 0.796093 354 10 0.7755659 390 12 0.862632 191 10 0.6990614 64 6 0.6865010 216 12 0.8120258 188 10 0.8319444 51 6 0.8737317 552 10 0.799512 178 10 0.878683 174 10 0.8515654 337 10 0.840074 495 10 0.853721 543 10 0.855062 466 12 0.3120297 531 10 0.2138290 302 9 0.542552 329 6 0.3409091 30 0 0.3783719 400 10 0.5329247 671 10 0.7865710 401 12 0.697709 346 12 0.6011050 286 7 0.6241714 464 8 0.562534 232 10 0.7877898 0.6758795 0.7111988 0.8157050 0.6640133 0.8161241 0.7812769 0.7287168 0.7263237 0.7849920 0.819332 0.841740 0.7073240 0.8619685 0.8594523 0.7969786 0.7863661 0.6886379 0.889954 0.780228 0.8654928 0.6209758 0.857250 0.8051225 0.7717610 0.8441085 0.7655983 0.858487 0.84985225 0.8392414 0.8220201 0.8770635 0.3275732 0.2267882 0.428516 0.3055008 0.387426 0.4533746 0.6712976 0.6365181 0.5361436 0.6371240 0.619645 6 0.786039 0.8274862 -0.04017387 10 0.744842 0.803924 -0.05908279 0.7934291 3.7779e-04 weaklyHypometh 1.00000 0.073663 weaklyHypometh 0.9679572 0.00297292 weaklyHypometh 1 0.34945 insignificant -0.03627355 0.159649 insignificant 1 insignificant 0.7940109 0.3157895 0.50486156 10 0.780714 0.4193891 0.3613253 9.1214e-62 9.9645e-01 hypermethylated 1.1402e-59 1.0000e+00 hypermethylated 2.7858e-16 9.9713e-01 hypermethylated 3.0953e-14 1.0000e+00 hypermethylated 0.3973331 3.4997e-04 hypermethylated 1.2462e-02 hypermethylated 0.7858713 0.557681 1.7271e-01 12 0.734418 0.680363 0.0540555 2.2890e-08 6.3423e-01 weaklyHypermeth 1.7608e-06 1.0000e+00 weaklyHypermeth 1.1442e-03 8.3284e-01 weaklyHypermeth 6.3567e-02 1.00000000 weaklyHypermeth 0.12968450 0.02629792 weaklyHypermeth 0.528928 insignificant 0.8311423 0.3157895 0.52552194 10 0.849017 0.4193891 0.42962810 8.5825e-51 1.0000e+00 hypermethylated 1.2261e-48 1.0000e+00 hypermethylated 1.4659e-13 9.9999e-01 hypermethylated 1.3326e-11 1.0000e+00 hypermethylated 4.3361e-01 1.9450e-04 hypermethylated 6.7069e-03 hypermethylated 0.8272464 0.556522 0.22713805 10 0.746501 0.621817 0.1246840 7.2053e-10 9.5687e-01 hypermethylated 9.0066e-08 1.000000 hypermethylated 2.6765e-04 9.8648e-01 hypermethylated 1.6728e-02 1.000000 hypermethylated 0.1659580 0.0096183 weaklyHypermeth 0.53435 insignificant 0.3156499 0.556533 -0.3336807 10 0.3894328 0.723549 -0.33411606 9.9704e-01 2.1649e-15 hypomethylated 1.0000e+00 1.0309e-13 hypomethylated 9.9990e-01 5.4735e-06 hypomethylated 1.0000e+00 2.2806e-04 hypomethylated -0.2676486 3.0219e-03 weaklyHypometh 7.9523e-02 weaklyHypometh chr4 8280879 8281879 15838 SH3TC1 ENSG00000125089 0.751382 919 20 0.8468421 537 18 0.8386525 361 15 0.8318533 745 17 0.846906 276 15 0.8643424 919 19 0.8084463 348 11 0.8484064 498 19 0.859127 370 18 0.8947494 389 18 0.885814 676 18 0.743176 170 12 0.8642288 541 18 0.8180405 290 13 0.7495654 393 17 0.6477273 108 4 0.596970 38 3 0.7702367 1666 18 0.803976 808 20 0.9150547 622 18 0.805664 249 14 0.8657894 247 12 0.8271950 477 17 0.8662709 267 17 0.8781232 353 12 0.7781112 732 18 0.845328 446 17 0.725500 178 9 0.8064018 816 18 0.940783 845 18 0.795592 830 18 0.924858 788 18 0.3567112 603 17 0.3795257 693 18 0.380516 750 15 0.7396904 132 8 0.2990339 537 17 0.6863513 905 19 0.8361906 540 18 0.878262 702 19 0.9334114 469 17 0.7290974 686 17 0.748614 474 18 0.8198550 0.7602686 0.8065467 0.8904739 0.8690351 0.8834225 0.8564912 0.8411668 0.8482283 0.8994444 0.918056 0.800617 0.8695557 0.8325670 0.8202806 0.7415900 0.7460606 0.6848554 0.838446 0.873298 0.8981131 0.7836421 0.900320 0.8732624 0.8526779 0.8777915 0.8483574 0.845450 0.86553377 0.9066047 0.8061432 0.9032939 0.2410299 0.2180095 0.382823 0.5723512 0.217672 0.5238772 0.7381623 0.7909399 0.8840263 0.7217581 0.727929 8 0.850501 0.8831941 -0.03121394 18 0.771168 0.741575 0.02959305 0.9989621 1.7468e-02 weaklyHypometh 1.00000 0.759476 insignificant 0.9834430 0.01512055 weaklyHypometh 1 0.73991 insignificant -0.02902669 0.260059 insignificant 1 insignificant 0.8510838 0.3817427 0.45057794 18 0.817041 0.4026556 0.4143854 1.4640e-64 1.0000e+00 hypermethylated 2.9280e-62 1.0000e+00 hypermethylated 4.5029e-16 1.0000e+00 hypermethylated 4.5029e-14 1.0000e+00 hypermethylated 0.3356367 6.4201e-03 weaklyHypermeth 1.1889e-01 insignificant 0.8509620 0.784519 5.6951e-02 18 0.790262 0.785238 0.0050244 1.8288e-02 2.1566e-01 weaklyHypermeth 3.6126e-01 1.0000e+00 insignificant 3.5951e-02 8.5548e-01 weaklyHypermeth 7.4897e-01 1.00000000 insignificant -0.01584031 0.72274727 insignificant 1.000000 insignificant 0.8838855 0.3817427 0.48463069 18 0.753747 0.3871689 0.36657809 3.9675e-58 1.0000e+00 hypermethylated 7.9351e-56 1.0000e+00 hypermethylated 4.6476e-15 1.0000e+00 hypermethylated 5.8095e-13 1.0000e+00 hypermethylated 3.6466e-01 4.4485e-03 weaklyHypermeth 8.7225e-02 weaklyHypermeth 0.8853278 0.784321 0.08859679 18 0.823897 0.762419 0.0614783 9.9647e-07 9.9496e-01 weaklyHypermeth 6.3166e-05 1.000000 weaklyHypermeth 2.6614e-03 9.8664e-01 weaklyHypermeth 1.2097e-01 1.000000 insignificant 0.0131864 0.7669844 insignificant 1.00000 insignificant 0.3819541 0.784321 -0.4171082 19 0.4026556 0.762419 -0.35976296 1.0000e+00 3.6673e-21 hypomethylated 1.0000e+00 2.8210e-19 hypomethylated 1.0000e+00 2.5625e-08 hypomethylated 1.0000e+00 1.9712e-06 hypomethylated -0.3514771 4.3325e-03 weaklyHypometh 1.0232e-01 insignificant chr4 8313979 8314979 15841 SH3TC1 ENSG00000125089 0.929125 279 11 0.7751098 124 9 0.8423661 174 7 0.8838002 282 7 0.808405 55 4 0.8441376 230 9 0.7797980 93 7 0.8812169 87 9 0.953022 124 7 0.8669609 140 9 0.882207 182 9 0.841235 117 7 0.9041811 183 9 0.9333333 85 3 0.7843889 178 9 0.8500000 92 7 0.871958 42 4 0.8111153 318 9 0.867228 113 9 0.8901004 211 9 0.871573 86 8 0.7303291 178 9 0.8554324 144 7 0.9314141 99 9 0.8229776 117 8 0.8173049 147 9 0.817817 122 9 0.870164 86 6 0.8792689 97 9 0.870157 125 9 0.741704 108 7 0.914102 253 9 0.7901047 161 9 0.7842769 135 7 0.887273 306 8 0.9166667 84 7 0.7537540 118 9 0.9376569 177 9 0.8287728 253 11 0.777556 264 7 0.8028588 267 7 0.6139509 235 7 0.872634 350 7 0.8823643 0.7559888 0.8382114 0.9045577 0.8099638 0.8602486 0.8678679 0.9278064 0.9216249 0.9067280 0.892980 0.933250 0.9164254 0.8621694 0.8253652 0.9651409 0.8719701 0.7489106 0.859790 0.901136 0.9307359 0.7231377 0.838257 0.9554858 0.8456294 0.8353603 0.8686303 0.918237 0.90904281 0.8721433 0.8336834 0.9069025 0.8920894 0.8594270 0.812331 0.9310128 0.818340 0.9150148 0.8165154 0.7594175 0.7944101 0.6591719 0.929611 7 0.863622 0.8513773 0.00519378 9 0.862723 0.844579 0.01814410 0.5456817 9.1459e-01 insignificant 1.00000 1.000000 insignificant 0.5588026 0.95020720 insignificant 1 1.00000 insignificant 0.01646420 0.442385 insignificant 1 insignificant 0.8636217 0.8358818 0.03493722 9 0.862723 0.8288819 0.0338410 1.7221e-01 7.9190e-01 insignificant 9.5673e-01 1.0000e+00 insignificant 9.3155e-01 9.8832e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0150291 6.7193e-01 insignificant 1.0000e+00 insignificant 0.8643686 0.799123 5.6472e-02 7 0.898317 0.814024 0.0842927 3.9097e-03 9.9117e-01 weaklyHypermeth 1.0567e-01 1.0000e+00 insignificant 8.4517e-03 9.9929e-01 weaklyHypermeth 2.8172e-01 1.00000000 insignificant 0.08082986 0.14255844 insignificant 1.000000 insignificant 0.8513773 0.8358818 0.01864472 9 0.844579 0.8288819 0.01569687 7.9884e-01 5.2592e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4501e-01 7.8956e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -1.4351e-03 9.6956e-01 insignificant 1.0000e+00 insignificant 0.8510911 0.799123 0.05867602 7 0.832623 0.814024 0.0185991 8.7342e-02 7.6798e-01 insignificant 1.0000e+00 1.000000 insignificant 5.5032e-02 9.7602e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0643657 0.2307971 insignificant 1.00000 insignificant 0.8375894 0.799123 0.0145805 7 0.8926420 0.814024 0.07861781 4.0583e-02 9.3410e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 5.8922e-02 9.9923e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0658007 2.6354e-01 insignificant 1.0000e+00 insignificant chr4 8555179 8556179 15852 ENSG00000212760 0.912118 157 7 0.8929861 346 7 0.8970368 270 7 0.9675794 152 5 0.904576 162 7 0.8734242 249 8 0.7437413 271 7 0.7908886 188 7 0.790658 285 7 0.8847283 173 7 0.863462 238 7 0.867504 172 7 0.9378089 218 7 0.9083862 66 2 0.8691447 241 7 0.8652021 119 7 0.726964 109 6 0.8762030 141 6 0.880400 291 7 0.8844074 189 7 0.867798 132 7 0.9710145 44 2 0.8535869 166 7 0.8431856 146 7 0.9509804 46 3 0.9527108 342 7 0.832241 126 7 0.835938 130 7 0.7914316 267 7 0.845118 370 7 0.873044 311 7 0.967135 219 7 0.8916134 238 7 0.7369501 193 7 0.898990 286 3 0.8009259 28 2 0.6819493 160 5 0.9298451 241 7 0.9456072 187 7 0.931815 165 7 0.8259711 153 6 0.8269210 159 6 0.800236 120 6 0.8567775 0.8639736 0.8516190 0.9407322 0.8673682 0.9010538 0.8562315 0.9151540 0.8640791 0.8985992 0.899374 0.874337 0.9107734 0.8791162 0.9324052 0.7711600 0.7936677 0.9020008 0.860070 0.936875 0.9326494 0.9511015 0.856810 0.9254720 0.9483699 0.9503403 0.8394313 0.924495 0.94630456 0.9455186 0.9386741 0.9571799 0.8036893 0.6154844 0.806347 0.8056665 0.748643 0.9107726 0.9335819 0.9159624 0.9341367 0.9592849 0.924337 3 0.881100 0.9299696 -0.05003289 7 0.849317 0.892095 -0.04277824 0.9998147 8.6716e-05 weaklyHypometh 1.00000 0.043358 weaklyHypometh 0.9838490 0.00098156 weaklyHypometh 1 0.32719 insignificant -0.01515439 0.503881 insignificant 1 insignificant 0.8810998 0.8036649 0.07679556 7 0.849317 0.8087887 0.0405281 1.7007e-03 1.8854e-01 weaklyHypermeth 1.4789e-02 1.0000e+00 weaklyHypermeth 4.2462e-02 4.3330e-01 weaklyHypermeth 3.5682e-01 1.0000e+00 insignificant 0.0434819 3.4880e-01 insignificant 1.0000e+00 insignificant 0.8810998 0.933673 -5.0979e-02 6 0.849317 0.848159 0.0011582 8.5926e-01 1.6764e-03 weaklyHypometh 1.0000e+00 1.3970e-01 insignificant 9.2543e-01 6.7055e-04 weaklyHypometh 1.0000e+00 0.08381892 weaklyHypometh 0.00075076 0.98261686 insignificant 1.000000 insignificant 0.9299696 0.8036649 0.13036888 7 0.892095 0.8087887 0.08330635 9.4689e-06 8.0287e-01 weaklyHypermeth 1.2297e-04 1.0000e+00 weaklyHypermeth 5.1643e-03 7.7699e-01 weaklyHypermeth 5.6751e-02 1.0000e+00 weaklyHypermeth 5.8636e-02 2.2837e-01 insignificant 1.0000e+00 insignificant 0.9299696 0.933673 -0.00100034 6 0.892095 0.848159 0.0439364 3.7548e-01 2.8366e-01 insignificant 1.0000e+00 1.000000 insignificant 6.0310e-01 2.4854e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0159052 0.6629525 insignificant 1.00000 insignificant 0.8036649 0.933673 -0.1299148 6 0.8087887 0.848159 -0.03936995 7.5196e-01 1.3561e-02 weaklyHypometh 1.0000e+00 1.0849e-01 insignificant 8.1253e-01 3.9164e-02 weaklyHypometh 1.0000e+00 3.4055e-01 insignificant -0.0427311 4.2116e-01 insignificant 1.0000e+00 insignificant chr4 9301779 9302779 15858 MIR548I2 ENSG00000221275 0.035866 913 19 0.0806262 627 20 0.0056082 618 20 0.0480519 883 20 0.000000 897 16 0.1026597 1129 19 0.0342466 940 16 0.0061152 438 15 0.046445 974 15 0.0488480 940 15 0.006002 343 15 0.122704 961 15 0.0044034 855 15 0.0028454 799 15 0.1794894 812 15 0.0026155 827 18 0.115741 299 13 0.0035194 1364 15 0.026699 292 14 0.0836199 859 17 0.013258 255 14 0.1543452 956 15 0.0086894 758 21 0.0071429 238 15 0.0167468 1304 16 0.0095238 641 23 0.053979 861 20 0.090785 492 20 0.0475000 626 19 0.014570 775 20 0.027814 681 20 0.020682 739 20 0.0208995 629 21 0.0030495 465 16 0.050000 391 20 0.0000000 352 18 0.1208336 360 18 0.0088873 533 20 0.0051789 960 15 0.041197 794 19 0.0497289 853 15 0.1215185 884 15 0.028546 838 16 0.0030249 0.0122190 0.0055624 0.0024001 0.0000000 0.0067626 0.0070131 0.0109999 0.0047765 0.0078083 0.010631 0.005323 0.0031714 0.0043003 0.0075432 0.0049083 0.0039365 0.0032398 0.020425 0.015056 0.0029597 0.0053464 0.010867 0.0096967 0.0030310 0.0170801 0.0090790 0.013446 0.00078927 0.0033951 0.0081101 0.0089696 0.0061920 0.0046662 0.031255 0.0000000 0.027308 0.0097492 0.0042666 0.0040698 0.0037510 0.0065927 0.014923 14 0.007867 0.0093739 0.00061001 20 0.134182 0.084945 0.04923733 0.5822590 9.8097e-01 insignificant 1.00000 1.000000 insignificant 0.8143694 0.99436676 insignificant 1 1.00000 insignificant 0.00905237 0.600002 insignificant 1 insignificant 0.0077505 0.0143014 -0.00429643 20 0.109756 0.0829585 0.0267975 9.0581e-01 5.2751e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.5971e-01 9.7783e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0138603 5.4540e-01 insignificant 1.0000e+00 insignificant 0.0072538 0.008547 -6.5104e-04 16 0.045875 0.069730 -0.0238552 7.4473e-01 7.5091e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.7503e-01 7.1270e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.00142853 0.95144325 insignificant 1.000000 insignificant 0.0095110 0.0142962 -0.00458108 21 0.087519 0.0804446 0.00707424 9.5800e-01 7.0623e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8651e-01 9.9681e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.8080e-03 8.3716e-01 insignificant 1.0000e+00 insignificant 0.0081876 0.008549 -0.00022216 16 0.037709 0.072221 -0.0345111 8.6173e-01 9.6432e-01 insignificant 1.0000e+00 1.000000 insignificant 9.7640e-01 9.6146e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0104809 0.6658050 insignificant 1.00000 insignificant 0.0135880 0.008549 0.0036829 16 0.0233812 0.072221 -0.04883938 9.8706e-01 9.9971e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9959e-01 9.9158e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0152889 5.8811e-01 insignificant 1.0000e+00 insignificant chr4 9629279 9630279 15861 ENSG00000209883 0.156753 719 22 0.1568730 798 29 0.2027633 762 30 0.1933722 557 20 0.196873 589 29 0.2424894 991 28 0.1802128 966 30 0.1951850 723 29 0.167122 1007 31 0.1446100 940 29 0.185918 797 31 0.158388 914 29 0.2894836 719 25 0.0727732 193 9 0.1902997 890 27 0.1532217 973 23 0.204073 696 19 0.2227297 680 19 0.222183 800 28 0.2351299 722 28 0.186662 411 30 0.1104050 501 21 0.1780688 631 27 0.1468288 393 31 0.1606252 611 20 0.2060654 856 26 0.142309 594 30 0.132625 408 28 0.2614955 654 29 0.164978 969 27 0.329523 791 28 0.200484 704 30 0.0996343 788 27 0.0255265 714 29 0.082427 620 19 0.1478495 335 19 0.0787238 518 32 0.1808515 864 27 0.1761309 689 24 0.220756 670 26 0.2760062 433 18 0.2191012 653 18 0.188608 454 21 0.0551168 0.0416560 0.1096298 0.0620604 0.0849765 0.0700364 0.0602577 0.0634053 0.0560803 0.0566454 0.069380 0.051431 0.2094861 0.0928834 0.0744308 0.0380980 0.0608835 0.0943693 0.148160 0.160229 0.0528429 0.0640639 0.065482 0.0714598 0.0848044 0.1433011 0.0646347 0.025203 0.10668551 0.0711207 0.2036689 0.1086236 0.0237709 0.0120249 0.019301 0.0173975 0.024924 0.0485192 0.1180386 0.1268280 0.1796132 0.1209447 0.089082 12 0.132767 0.1420024 -0.03091913 28 0.181943 0.215534 -0.03359059 0.9625773 6.3743e-03 weaklyHypometh 1.00000 0.385237 insignificant 0.7932451 0.82333326 insignificant 1 1.00000 insignificant 0.00351675 0.863017 insignificant 1 insignificant 0.1327760 0.0472215 0.09527131 29 0.186381 0.0693248 0.1170561 7.3154e-20 1.0000e+00 weaklyHypermeth 2.0901e-18 1.0000e+00 weaklyHypermeth 4.1026e-13 1.0000e+00 weaklyHypermeth 2.9304e-11 1.0000e+00 weaklyHypermeth 0.0860205 9.7082e-03 weaklyHypermeth 1.7336e-01 insignificant 0.1310515 0.100724 -4.3283e-02 22 0.185211 0.233547 -0.0483359 4.6193e-01 1.9494e-13 weaklyHypometh 1.0000e+00 1.9494e-10 weaklyHypometh 9.9414e-01 3.3874e-07 weaklyHypometh 1.0000e+00 0.00033874 weaklyHypometh -0.02759787 0.20976865 insignificant 1.000000 insignificant 0.1420591 0.0471969 0.11009573 29 0.220791 0.0693248 0.15146595 3.8395e-16 1.0000e+00 weaklyHypermeth 1.0665e-14 1.0000e+00 weaklyHypermeth 3.3313e-07 1.0000e+00 weaklyHypermeth 1.0746e-05 1.0000e+00 weaklyHypermeth 8.2504e-02 1.4289e-02 weaklyHypermeth 2.3046e-01 insignificant 0.1378106 0.100724 -0.02699158 22 0.186101 0.233547 -0.0474463 7.3952e-01 4.2026e-05 weaklyHypometh 1.0000e+00 0.017324 weaklyHypometh 9.9220e-01 4.6604e-05 weaklyHypometh 1.0000e+00 0.046604 weaklyHypometh -0.0311146 0.2291875 insignificant 1.00000 insignificant 0.0450712 0.100724 -0.0888755 22 0.0713427 0.233547 -0.16220421 1.0000e+00 4.1921e-25 weaklyHypometh 1.0000e+00 3.8110e-23 weaklyHypometh 1.0000e+00 1.8926e-11 weaklyHypometh 1.0000e+00 2.7037e-09 weaklyHypometh -0.1136183 3.1848e-03 weaklyHypometh 8.1661e-02 weaklyHypometh chr4 13008679 13009679 15939 ENSG00000205940 0.604575 87 5 0.7106793 77 5 0.5350000 28 5 0.7303571 70 5 0.633333 30 5 0.7993693 232 5 0.7008658 37 5 0.5939782 67 5 0.433077 31 3 0.7653061 19 1 0.634450 152 5 0.800000 25 5 0.6066667 54 5 0.5932540 45 5 0.6217949 64 5 0.7800000 19 2 0.750000 6 0 0.8157576 57 5 0.740714 64 5 0.7707133 191 5 0.571429 30 5 0.7428571 26 4 0.7035714 43 5 0.5913300 41 4 0.7900000 23 3 0.4618437 90 5 0.833333 37 3 0.550000 8 0 0.7314286 48 5 0.677647 85 5 0.487627 105 5 0.619660 171 5 0.6669468 43 5 0.6066667 37 5 0.643167 88 5 NA 0 0 0.6689179 74 5 0.4702461 76 5 0.8254545 58 5 0.810952 87 5 0.6783883 75 5 0.8666667 28 4 0.878511 369 5 0.6021831 0.7145258 0.5329897 0.7347060 0.6855670 0.8032653 0.7078145 0.5954069 0.4444092 0.8674521 0.765275 0.802062 0.6151203 0.6437572 0.6767116 0.7788660 0.7900498 0.8138082 0.737297 0.774259 0.8144330 0.7349043 0.710788 0.6994689 0.7938144 0.6562693 0.8281787 0.577320 0.72930781 0.6773802 0.6858902 0.7448078 0.6620463 0.5989200 0.641753 NA 0.594065 0.6442882 0.8241799 0.8078547 0.6789207 0.8694158 0.880851 0 0.723577 0.7227723 0.00755265 5 0.574132 0.444767 0.12936484 0.1557364 5.8051e-01 insignificant 1.00000 1.000000 insignificant 0.6010425 0.52169614 insignificant 1 1.00000 insignificant 0.03426739 0.414960 lowCoverage 1 lowCoverage 0.7239852 0.6477987 0.08881816 5 0.621451 0.5177589 0.1036918 8.8566e-03 9.4835e-01 weaklyHypermeth 6.5122e-02 1.0000e+00 weaklyHypermeth 4.5361e-02 7.7516e-01 weaklyHypermeth 3.7489e-01 1.0000e+00 insignificant 0.0698058 1.5030e-01 lowCoverage 1.0000e+00 lowCoverage 0.7259866 0.839546 -1.2420e-01 5 0.718611 0.846354 -0.1277429 9.9999e-01 1.7744e-04 weaklyHypometh 1.0000e+00 2.5348e-02 weaklyHypometh 9.9987e-01 4.2807e-03 weaklyHypometh 1.0000e+00 0.24711751 insignificant -0.13100002 0.01559154 lowCoverage 0.418374 lowCoverage 0.7227723 0.6498423 0.07979678 5 0.444767 0.5824788 -0.13771152 1.9206e-02 8.9998e-01 weaklyHypermeth 1.3621e-01 1.0000e+00 insignificant 3.1094e-02 8.9671e-01 weaklyHypermeth 2.6110e-01 1.0000e+00 insignificant 3.5538e-02 4.9523e-01 lowCoverage 1.0000e+00 lowCoverage 0.7310443 0.839546 -0.12423014 5 0.711628 0.846354 -0.1347267 9.9681e-01 4.1217e-04 weaklyHypometh 1.0000e+00 0.070742 weaklyHypometh 9.9352e-01 5.9108e-02 insignificant 1.0000e+00 1.000000 insignificant -0.1652674 0.0063318 lowCoverage 0.47530 lowCoverage 0.6517572 0.839546 -0.2063532 5 0.6319661 0.846354 -0.21438827 1.0000e+00 6.5673e-08 hypomethylated 1.0000e+00 1.8764e-06 hypomethylated 1.0000e+00 1.5515e-05 hypomethylated 1.0000e+00 5.7464e-04 hypomethylated -0.2008058 4.5030e-03 lowCoverage 1.0234e-01 lowCoverage chr4 14473479 14474479 15972 ENSG00000202449 0.727639 176 14 0.6569999 140 14 0.4943509 150 9 0.7913318 145 8 0.767214 60 8 0.5971418 171 10 0.5832483 63 4 0.5441919 40 4 0.321429 47 3 0.6421569 74 6 0.708483 182 12 0.429269 117 10 0.5206293 108 5 0.6666667 13 2 0.7243056 61 4 0.2737376 115 10 0.293223 53 6 0.7320335 233 8 0.827350 99 8 0.8737013 67 3 0.205556 26 0 0.4683052 108 4 0.7822952 97 10 0.5952381 41 5 0.6833333 24 3 0.9566302 158 9 0.319902 58 2 0.376667 24 2 0.5725940 126 11 0.926017 217 16 0.949864 195 16 0.568776 166 6 0.1389600 270 17 0.0289593 196 13 0.572984 200 13 0.1758242 62 4 0.0842634 90 6 0.1653337 230 16 0.9055048 144 12 0.541728 301 13 0.7592165 188 9 0.7119163 178 15 0.662339 277 15 0.7348582 0.6826383 0.5585882 0.8225081 0.6892250 0.5068264 0.4568095 0.7389899 0.6033333 0.7220915 0.834589 0.406836 0.6446762 0.8042883 0.9047778 0.1700514 0.6914457 0.6267272 0.909879 0.736212 0.6052426 0.4101866 0.757879 0.5086468 0.7527029 0.9501284 0.7706190 0.503927 0.62958450 0.9545557 0.9031894 0.4493298 0.1998191 0.0638431 0.785892 0.1022222 0.097500 0.1743188 0.8124586 0.5284084 0.7071678 0.6882026 0.560332 0 0.648367 0.7435484 -0.09885976 5 0.637823 0.711087 -0.07326332 0.9996719 1.4370e-03 weaklyHypometh 1.00000 0.179631 insignificant 0.9986609 0.29253136 insignificant 1 1.00000 insignificant -0.00834305 0.920661 insignificant 1 insignificant 0.6488152 0.2041985 0.46289155 5 0.671547 0.2084590 0.4630880 3.6877e-29 1.0000e+00 hypermethylated 1.4751e-27 1.0000e+00 hypermethylated 1.0522e-15 1.0000e+00 hypermethylated 9.5651e-14 1.0000e+00 hypermethylated 0.4143677 1.7373e-03 weaklyHypermeth 4.2372e-02 weaklyHypermeth 0.6512968 0.662374 -4.9076e-03 5 0.667738 0.665720 0.0020180 6.7294e-01 5.2407e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.0197e-01 3.5433e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.10738571 0.17141338 insignificant 1.000000 insignificant 0.7439418 0.2041985 0.55869858 5 0.729442 0.2084590 0.52098296 5.0949e-32 1.0000e+00 hypermethylated 3.3966e-30 1.0000e+00 hypermethylated 3.0400e-13 1.0000e+00 hypermethylated 2.5333e-11 1.0000e+00 hypermethylated 4.2271e-01 1.7271e-03 weaklyHypermeth 4.0164e-02 weaklyHypermeth 0.7591667 0.662374 0.10248068 5 0.810710 0.665720 0.1449894 1.3080e-02 1.0000e+00 weaklyHypermeth 2.7830e-01 1.000000 insignificant 3.4009e-01 9.9357e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0990427 0.3098924 insignificant 1.00000 insignificant 0.2048309 0.662983 -0.4844117 12 0.2168112 0.699006 -0.48219519 1.0000e+00 1.6073e-29 hypomethylated 1.0000e+00 2.6789e-27 hypomethylated 1.0000e+00 5.0478e-14 hypomethylated 1.0000e+00 1.2620e-11 hypomethylated -0.5217535 5.5817e-04 hypomethylated 2.7881e-02 hypomethylated chr4 15516279 15517279 16005 CD38 ENSG00000004468 0.2019676 691 20 0.087703 490 19 0.106687 413 19 0.14670929 290 13 0.033780 334 19 0.244384 659 20 0.0518181 653 19 0.148162 391 19 0.085442 482 19 0.0885090 341 19 0.165582 556 20 0.1141500 494 19 0.049923 536 19 NA 0 0 0.093420 585 19 0.060294 532 19 0.1031368 327 19 0.2972230 545 19 0.056882 345 21 0.0785942 244 19 0.09897 146 18 0.2787582 152 10 0.151951 619 19 0.093357 144 16 0.108985 255 13 0.1163557 558 20 0.0478438 263 19 0.045317 101 15 0.044775 367 19 0.086883 431 19 0.1352628 362 18 0.0479849 486 19 0.7619133 119 13 0.722546 238 19 0.588889 160 15 0.60695 244 14 0.537956 85 9 0.8392857 166 15 0.433064 832 21 0.4221329 628 21 0.3426253 630 19 0.557913 676 17 0.5077173 742 17 0.1509277 0.0359921 0.10797297 0.1167286 0.0252619 0.1537813 0.0488815 0.094143 0.0854313 0.0955637 0.1069890 0.110998 0.0413821 NA 0.079596 0.05054577 0.07464756 0.3210165 0.054588 0.0641660 0.1232711 0.2911323 0.169370 0.0361625 0.0643282 0.07301675 0.0271641 0.051663 0.039568 0.0403103 0.11631828 0.0445774 0.6290958 0.7078083 0.6084350 0.54271 0.405371 0.6741456 0.4428787 0.4045185 0.3723511 0.4981779 0.4801659 9 0.1128453 0.0919392 0.0231163 19 0.1465491 0.119924 0.02662483 0.0063445 0.9994522 weaklyHypermeth 1 1.00000 insignificant 0.00088542 9.9995e-01 weaklyHypermeth 0.88542 1.000000 insignificant 0.01184196 0.6378521 insignificant 1 insignificant 0.1129449 0.6656775 -0.5346224 18 0.1821095 0.6538582 -0.47174865 1.0000e+00 2.1123e-121 hypomethylated 1.0000e+00 2.1123e-118 hypomethylated 1.0000e+00 2.1041e-32 hypomethylated 1.0000e+00 2.1041e-29 hypomethylated -0.5597104 2.5074e-05 hypomethylated 0.0041790 hypomethylated 0.1128579 0.4253136 -0.3266909 19 0.1532104 0.452575 -0.2993644 1.000000 3.8707e-91 hypomethylated 1 3.8707e-88 hypomethylated 1.00000 1.2813e-34 hypomethylated 1 1.2813e-31 hypomethylated -0.3361449 0.00023711 hypomethylated 0.084753 hypomethylated 0.0919866 0.6663357 -0.5550845 18 0.125375 0.6678453 -0.54246993 1.0000e+00 1.4029e-92 hypomethylated 1.0000e+00 1.4029e-89 hypomethylated 1.0000e+00 5.4654e-29 hypomethylated 1.0000e+00 5.4654e-26 hypomethylated -0.5715524 1.4839e-05 hypomethylated 0.0024731 hypomethylated 0.0919866 0.4253136 -0.34848649 19 0.125375 0.452575 -0.3271995 1.00000 2.2750e-70 hypomethylated 1 2.2750e-67 hypomethylated 1.00000 2.6966e-31 hypomethylated 1 2.6966e-28 hypomethylated -0.3479869 0.00013286 hypomethylated 0.066432 hypomethylated 0.6663357 0.4253136 0.215800 18 0.6678453 0.452575 0.2152705 8.3179e-12 1.0000e+00 hypermethylated 8.3179e-09 1.0000e+00 hypermethylated 3.1413e-07 9.9999e-01 hypermethylated 0.00031413 1.00000000 hypermethylated 0.223565 0.00498920 weaklyHypermeth 0.330752 insignificant chr4 18849479 18850479 16031 ENSG00000209240 0.7148382 276 6 0.665598 75 6 0.568066 62 3 0.72889244 210 6 0.548701 87 6 0.730952 66 6 0.6392221 101 3 0.856656 114 6 0.638889 42 3 0.7956349 31 3 0.723734 110 6 0.7261905 48 3 0.744444 103 5 0.749786 93 5 0.727844 67 6 0.733333 36 3 1.0000000 15 0 0.6133450 320 6 0.692308 45 3 0.6138889 22 1 0.60000 11 0 0.4000000 15 3 0.701398 186 6 0.519841 30 3 0.490622 122 3 0.6928571 64 6 0.6482517 38 3 0.413889 19 2 0.604075 108 6 0.735088 102 6 0.6820670 66 6 0.6071429 55 3 0.6030968 141 6 0.508333 62 6 0.594336 82 6 0.83333 6 0 0.674172 90 6 0.6341783 61 6 0.742367 287 6 0.6812361 253 6 0.6568373 292 6 0.613667 239 6 0.6695432 267 6 0.6420968 0.6495726 0.61187364 0.6633039 0.6777056 0.7231746 0.6970072 0.786506 0.5222222 0.7682540 0.6152070 0.661905 0.6977778 0.68965812 0.733995 0.67333333 1.00000000 0.6447941 0.676923 0.5155556 0.6420466 0.4287133 0.691468 0.5650794 0.5849951 0.70571429 0.6928351 0.601833 0.607742 0.7340351 0.68616013 0.6428571 0.5761594 0.5200000 0.5999564 0.73333 0.628675 0.6286713 0.6695498 0.6729842 0.6622698 0.6707556 0.6740688 0 0.6654489 0.6642157 0.0197190 6 0.7014420 0.545441 0.15600081 0.1142598 0.9632296 insignificant 1 1.00000 insignificant 0.04971562 9.9926e-01 weaklyHypermeth 1.00000 1.000000 insignificant 0.11934680 0.0064148 lowCoverage 1 lowCoverage 0.6654373 0.6085973 0.0868658 6 0.6899034 0.6026167 0.08728670 5.7966e-05 9.9974e-01 weaklyHypermeth 2.7194e-03 1.0000e+00 weaklyHypermeth 6.3711e-02 9.9808e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0693747 2.0299e-01 lowCoverage 1.0000000 lowCoverage 0.6652720 0.6808670 -0.0051453 6 0.6684692 0.747868 -0.0793985 0.462256 3.2058e-01 insignificant 1 1.0000e+00 insignificant 0.23835 8.0544e-01 insignificant 1 1.0000e+00 insignificant 0.0378861 0.23748658 lowCoverage 1.000000 lowCoverage 0.6662546 0.6085973 0.0671911 6 0.659069 0.6026167 0.05645201 1.9965e-02 9.5516e-01 weaklyHypermeth 3.9822e-01 1.0000e+00 insignificant 6.1440e-01 5.7807e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0499721 3.8433e-01 lowCoverage 1.0000000 lowCoverage 0.6646192 0.6808670 -0.01338066 6 0.556802 0.747868 -0.1910662 0.92198 6.5037e-01 insignificant 1 1.0000e+00 insignificant 0.95624 6.9904e-01 insignificant 1 1.0000e+00 insignificant -0.0814607 0.05154340 lowCoverage 1.000000 lowCoverage 0.6085973 0.6803892 -0.070975 6 0.6026167 0.663824 -0.0612069 9.0676e-01 3.7117e-03 weaklyHypometh 1.0000e+00 1.0772e-01 insignificant 8.3795e-01 3.6774e-01 insignificant 1.00000000 1.00000000 insignificant -0.031489 0.54181178 insignificant 1.000000 insignificant chr4 24163679 24164679 16118 MIR573 ENSG00000207697 0.8296595 88 4 0.559375 60 5 0.581454 55 4 0.82596838 115 4 0.492188 50 4 0.837615 136 4 0.6658730 47 3 0.792001 103 4 0.645833 39 3 0.5476190 22 1 0.721431 232 6 0.5416667 12 0 0.710000 20 2 0.733333 19 3 0.717593 34 3 1.000000 6 0 0.6666667 7 1 0.8283069 86 4 0.587500 31 3 0.7232143 111 6 0.57448 37 4 0.7916667 16 1 0.745833 50 4 0.738095 29 2 0.616149 79 4 0.6216471 152 6 0.3555624 75 4 0.625000 10 0 0.681818 34 3 0.728778 127 6 0.6872927 172 6 0.7081019 145 6 0.5449735 98 4 0.774068 92 4 0.640130 132 4 1.00000 22 2 0.450694 77 6 0.6677350 131 6 0.770494 140 4 0.6730994 108 4 0.6999158 134 6 0.839286 28 3 0.6672619 162 6 0.8335347 0.6802885 0.80296896 0.8397993 0.7584135 0.8577898 0.9229701 0.815482 0.8149038 0.8589744 0.8618698 0.620192 0.8425331 0.87307692 0.853098 0.85578712 0.70655472 0.8376323 0.766827 0.8698489 0.8622852 0.9471154 0.790705 0.9294872 0.8647157 0.76462547 0.7301041 0.682692 0.626232 0.8607287 0.81064587 0.8543002 0.7088930 0.7942739 0.4755497 1.00000 0.724893 0.8043639 0.7986770 0.7786775 0.8245435 0.8300137 0.8029991 0 0.7955975 0.7408207 0.0114191 4 0.5481524 0.512058 0.03609485 0.6923935 0.8946098 lowCoverage 1 1.00000 lowCoverage 0.86219736 8.6357e-01 lowCoverage 1.00000 1.000000 lowCoverage 0.04416273 0.3216088 lowCoverage 1 lowCoverage 0.7955975 0.7150635 0.1080414 4 0.5481524 0.4604361 0.08771632 7.9277e-03 8.2362e-01 lowCoverage 1.7617e-01 1.0000e+00 lowCoverage 3.5327e-01 4.8429e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0207647 8.1108e-01 lowCoverage 1.0000000 lowCoverage 0.7973186 0.8094406 0.0163614 4 0.5907456 0.579435 0.0113105 0.450378 6.6240e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.71673 7.9183e-01 lowCoverage 1 1.0000e+00 lowCoverage -0.0296465 0.51095326 lowCoverage 1.000000 lowCoverage 0.7408207 0.7150635 0.0946531 5 0.512058 0.4604361 0.05162147 1.3393e-01 6.8738e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.1498e-01 8.3333e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0233980 7.9109e-01 lowCoverage 1.0000000 lowCoverage 0.7416216 0.8094406 0.00400424 6 0.585209 0.579435 0.0057735 0.50309 3.6740e-01 insignificant 1 1.0000e+00 insignificant 0.56926 7.5574e-01 insignificant 1 1.0000e+00 insignificant -0.0738093 0.13963354 lowCoverage 1.000000 lowCoverage 0.7163636 0.8094406 -0.092928 5 0.5262127 0.579435 -0.0532225 8.1219e-01 1.5856e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.1329e-01 2.4507e-01 insignificant 1.00000000 1.00000000 insignificant -0.050411 0.57230551 lowCoverage 1.000000 lowCoverage chr4 24698879 24699879 16130 LGI2 ENSG00000153012 0.9205287 120 5 0.580928 57 3 0.756250 34 2 0.83625294 91 5 0.683333 39 2 0.645931 156 5 0.5878788 31 3 0.840625 64 4 0.906015 27 1 0.9503205 31 2 0.762995 90 5 0.5500000 18 3 0.828125 46 1 0.909091 13 1 0.677019 31 1 0.282353 23 1 0.0000000 4 0 0.4696354 83 3 0.915330 62 5 0.6895643 96 5 0.62778 22 1 0.8583333 55 4 0.751120 62 3 0.571429 19 1 0.770232 94 5 0.9726562 75 5 0.6261905 26 2 0.611111 13 0 0.887500 71 5 0.937190 73 4 0.9247024 61 6 0.6653846 122 5 0.0129187 135 5 0.404341 83 5 0.029447 165 5 0.00000 102 5 0.132447 103 5 0.0000000 119 5 0.627579 67 5 0.7924242 86 5 0.9210320 97 5 0.993333 38 1 0.5290570 92 5 0.8880456 0.8580735 0.46195652 0.9176740 0.5471014 0.7700467 0.6811594 0.801242 0.8654206 0.8062988 0.7874025 0.149381 0.8749241 0.78969679 0.801512 0.41842237 0.19725549 0.7313686 0.867027 0.9118101 0.6884058 0.8405797 0.796675 1.0000000 0.7868620 0.83355978 0.6587199 0.725480 0.801242 0.9308300 0.93297101 0.6910535 0.0219251 0.2881301 0.0432224 0.00000 0.064871 0.0000000 0.7842391 0.8516140 0.9032396 0.9746377 0.7266733 1 0.7876026 0.7994228 -0.0055326 5 0.5142475 0.569195 -0.05494773 0.9860658 0.7986133 insignificant 1 1.00000 insignificant 0.99994784 5.8016e-01 insignificant 1.00000 1.000000 insignificant -0.07736012 0.2620086 lowCoverage 1 lowCoverage 0.7928506 0.0864023 0.7283578 5 0.6277918 0.1452062 0.48258562 3.5483e-41 1.0000e+00 hypermethylated 3.5483e-38 1.0000e+00 hypermethylated 1.5561e-12 9.9998e-01 hypermethylated 1.5561e-09 1.0000e+00 hypermethylated 0.5930831 1.0413e-05 lowCoverage 0.0020827 lowCoverage 0.7968902 0.7973684 -0.0223508 5 0.7583773 0.659059 0.0993181 0.240757 8.1861e-01 insignificant 1 1.0000e+00 insignificant 0.69888 5.1365e-01 insignificant 1 1.0000e+00 insignificant -0.0830764 0.44097916 lowCoverage 1.000000 lowCoverage 0.8079179 0.0866477 0.7368321 5 0.718829 0.1716073 0.54722213 5.1477e-25 1.0000e+00 hypermethylated 1.7159e-22 1.0000e+00 hypermethylated 1.0052e-12 1.0000e+00 hypermethylated 1.0052e-09 1.0000e+00 hypermethylated 0.6704432 9.2041e-06 lowCoverage 0.0018408 lowCoverage 0.7981221 0.7973684 -0.01775420 5 0.665076 0.659059 0.0060169 0.70892 6.9639e-01 insignificant 1 1.0000e+00 insignificant 0.82880 7.1804e-01 insignificant 1 1.0000e+00 insignificant -0.0057163 0.95474005 lowCoverage 1.000000 lowCoverage 0.0863836 0.7973684 -0.733297 5 0.0646133 0.659059 -0.5944459 1.0000e+00 1.8157e-19 hypomethylated 1.0000e+00 1.8157e-16 hypomethylated 1.0000e+00 2.0480e-07 hypomethylated 1.00000000 0.00020480 hypomethylated -0.676159 0.00028463 lowCoverage 0.047439 lowCoverage chr4 25831779 25832779 16145 C4orf52 ENSG00000180408 0.8545166 160 6 0.478049 133 6 0.591270 46 4 0.88255377 160 6 0.814394 42 4 0.811775 239 6 0.8692308 50 4 0.825000 124 6 0.616667 33 3 0.7951389 47 4 0.845958 180 6 0.8333333 10 0 0.878935 50 4 0.798341 38 4 0.606803 69 4 0.875000 16 0 0.6000000 8 0 0.8148707 111 6 0.690728 118 4 0.8561414 160 6 0.85693 123 2 0.8523099 153 4 0.708771 64 6 0.610545 121 6 0.814815 194 6 0.8419130 117 6 0.7827199 230 4 0.615909 61 4 0.838313 95 6 0.687497 117 6 0.6446159 124 6 0.9142968 214 6 0.5587510 97 6 0.724412 64 5 0.744792 110 6 0.82500 28 2 0.774912 76 6 0.8250448 112 6 0.814373 104 6 0.8157736 132 6 0.7687048 163 6 0.820833 46 6 0.7830184 153 6 0.7440372 0.6947654 0.58692663 0.7563001 0.6969399 0.7591539 0.7821667 0.787795 0.6992126 0.8099300 0.8287872 0.790026 0.7867563 0.76142755 0.807968 0.87598425 0.61771837 0.7954249 0.746879 0.7450997 0.8201579 0.7773685 0.698435 0.7071701 0.7781059 0.74790543 0.6691134 0.759574 0.687547 0.6730255 0.75955704 0.8210193 0.6442846 0.6708182 0.6874880 0.73386 0.732643 0.7722709 0.7131225 0.7151226 0.6886885 0.7746063 0.7430999 2 0.8054627 0.7631742 0.0104750 6 0.7676231 0.773550 -0.00592671 0.5455357 0.8257850 insignificant 1 1.00000 insignificant 0.44425215 8.9028e-01 insignificant 1.00000 1.000000 insignificant 0.00288248 0.9442803 lowCoverage 1 lowCoverage 0.8054627 0.7330595 0.0650629 6 0.7676231 0.6888465 0.07877657 2.3671e-04 9.6526e-01 weaklyHypermeth 1.0292e-02 1.0000e+00 weaklyHypermeth 1.8734e-02 8.8337e-01 weaklyHypermeth 5.6771e-01 1.0000e+00 insignificant 0.0247832 6.2156e-01 lowCoverage 1.0000000 lowCoverage 0.8054627 0.8244147 0.0165511 6 0.7676231 0.780693 -0.0130695 0.324062 6.1649e-01 insignificant 1 1.0000e+00 insignificant 0.26739 8.3706e-01 insignificant 1 1.0000e+00 insignificant -0.0336055 0.26122884 lowCoverage 1.000000 lowCoverage 0.7631742 0.7330595 0.0538602 6 0.773550 0.6888465 0.08470328 9.6920e-03 9.7218e-01 weaklyHypermeth 2.0621e-01 1.0000e+00 insignificant 7.1199e-02 9.2032e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0219007 6.7316e-01 insignificant 1.0000000 insignificant 0.7631742 0.8244147 0.00666146 6 0.773550 0.780693 -0.0071428 0.58974 5.4609e-01 insignificant 1 1.0000e+00 insignificant 0.86434 8.7237e-01 insignificant 1 1.0000e+00 insignificant -0.0364880 0.27652165 insignificant 1.000000 insignificant 0.7330595 0.8244147 -0.047542 6 0.6888465 0.780693 -0.0918460 9.4743e-01 2.0238e-02 weaklyHypometh 1.0000e+00 4.4973e-01 insignificant 9.5683e-01 2.0547e-01 insignificant 1.00000000 1.00000000 insignificant -0.058389 0.21322938 insignificant 1.000000 insignificant chr4 25964579 25965579 16149 RBPJ ENSG00000168214 0.7628588 390 12 0.742205 252 13 0.667635 192 12 0.76958907 302 12 0.588976 117 9 0.758092 571 12 0.7018613 158 9 0.761789 242 12 0.728350 158 12 0.6547923 147 13 0.798710 397 13 0.6825397 86 10 0.794273 285 13 0.847985 61 7 0.738549 164 11 0.520503 71 8 0.6464187 95 10 0.7223063 327 12 0.800089 319 13 0.6830058 421 12 0.77810 107 9 0.6779087 160 12 0.796075 245 12 0.773413 143 9 0.695899 168 12 0.7422679 342 12 0.6975394 164 10 0.714021 77 6 0.715501 246 13 0.841282 283 12 0.7357749 337 12 0.7691910 589 12 0.5949375 238 13 0.684774 239 13 0.715116 243 10 0.60947 91 9 0.445492 200 10 0.6751033 328 12 0.772272 296 12 0.7584617 294 12 0.7623334 293 12 0.752295 251 12 0.7543549 286 12 0.7519582 0.7108633 0.67634610 0.7811682 0.6870198 0.7875428 0.7047775 0.810409 0.7330588 0.8089095 0.8025217 0.686572 0.7874826 0.78667719 0.778712 0.62460710 0.68565303 0.7517726 0.761694 0.7473023 0.7808291 0.7607018 0.803362 0.7545892 0.7460661 0.75067349 0.7365386 0.779685 0.761541 0.8132224 0.72360364 0.7758832 0.6378573 0.6983040 0.7830620 0.65169 0.492924 0.6836115 0.7830861 0.7606863 0.7555201 0.7757237 0.7618495 8 0.7413249 0.7500874 -0.0038879 12 0.7423700 0.698971 0.04339923 0.7698360 0.8103790 insignificant 1 1.00000 insignificant 0.86162309 3.1542e-01 insignificant 1.00000 1.000000 insignificant -0.02622162 0.2484876 insignificant 1 insignificant 0.7410921 0.6422704 0.1059212 12 0.7292242 0.6283724 0.10085180 1.1592e-07 9.9967e-01 weaklyHypermeth 1.0539e-05 1.0000e+00 weaklyHypermeth 7.2333e-04 9.9674e-01 weaklyHypermeth 6.1088e-02 1.0000e+00 weaklyHypermeth 0.0977109 5.9009e-02 insignificant 1.0000000 insignificant 0.7413648 0.7176056 -0.0100655 12 0.7461477 0.801741 -0.0555930 0.962192 1.1729e-01 insignificant 1 1.0000e+00 insignificant 0.92011 1.9030e-01 insignificant 1 1.0000e+00 insignificant -0.0414171 0.03016812 weaklyHypometh 1.000000 insignificant 0.7500000 0.6422704 0.1112890 12 0.690919 0.6283724 0.06254612 2.2690e-06 9.9620e-01 weaklyHypermeth 1.6207e-04 1.0000e+00 weaklyHypermeth 2.8615e-04 9.9932e-01 weaklyHypermeth 2.8847e-02 1.0000e+00 weaklyHypermeth 0.1239325 2.4682e-02 weaklyHypermeth 1.0000000 insignificant 0.7505263 0.7176056 -0.00237876 12 0.710236 0.801741 -0.0915046 0.91483 2.6943e-01 insignificant 1 1.0000e+00 insignificant 0.76094 5.0412e-01 insignificant 1 1.0000e+00 insignificant -0.0151955 0.30925622 insignificant 1.000000 insignificant 0.6422704 0.7170078 -0.108725 12 0.6283724 0.788523 -0.1601510 1.0000e+00 7.0108e-06 weaklyHypometh 1.0000e+00 4.6738e-04 weaklyHypometh 1.0000e+00 2.3116e-03 weaklyHypometh 1.00000000 0.13597742 insignificant -0.139128 0.01714220 weaklyHypometh 0.668667 insignificant chr4 29457979 29458979 16180 ENSG00000212045 0.8251984 203 5 0.914615 158 5 0.756166 97 5 0.78827430 202 5 0.707692 67 5 0.782616 320 5 0.9460636 115 5 0.975920 121 5 0.907843 70 5 0.8118056 55 3 0.802116 237 5 0.9457143 73 5 0.935714 61 5 0.865029 75 5 0.776974 152 5 0.963636 40 5 1.0000000 1 0 0.7970270 216 6 0.966251 190 5 0.9706886 287 5 0.97222 29 5 0.7696970 64 5 0.914286 97 5 0.754761 82 5 0.948413 54 5 0.8304503 167 5 0.9763077 92 5 0.761905 52 5 0.883096 109 5 0.972881 152 5 0.9564846 135 5 0.8282167 248 5 0.8918022 158 5 0.794589 63 5 0.881720 278 5 NA 0 0 0.635963 228 5 0.6692278 199 5 0.840677 303 5 0.9699947 208 5 0.9628824 194 5 0.756054 164 5 0.9927922 201 5 0.9938988 0.9362179 0.89867216 0.9461180 0.8307692 0.9410794 0.9519923 0.979515 0.9215686 0.9677083 0.9296296 0.941071 0.9508929 0.88128655 0.945634 0.97727273 NA 0.9053460 0.970612 0.9630728 0.9583333 0.9272727 0.892857 0.9206028 0.9434524 0.96929109 0.9703846 1.000000 0.887388 0.9593211 0.94829649 0.9619303 0.8939835 0.8180465 0.9180108 NA 0.802517 0.9323890 0.9766794 0.9674920 0.9582327 0.9090810 0.9909903 5 0.9335766 0.9406714 -0.0086404 5 0.7096240 0.799402 -0.08977752 0.9457193 0.0813927 insignificant 1 1.00000 insignificant 0.94440300 3.4570e-02 weaklyHypometh 1.00000 1.000000 insignificant -0.00875925 0.7889832 lowCoverage 1 lowCoverage 0.9335766 0.8369330 0.0852457 5 0.7096240 0.6628769 0.04674713 2.6193e-04 8.6305e-01 weaklyHypermeth 1.0914e-02 1.0000e+00 weaklyHypermeth 4.8561e-02 9.2531e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.0973068 1.4362e-01 lowCoverage 1.0000000 lowCoverage 0.9335766 0.9616822 -0.0264864 5 0.7096240 0.831063 -0.1214387 0.996994 3.9527e-02 weaklyHypometh 1 1.0000e+00 insignificant 0.99687 1.0237e-01 insignificant 1 1.0000e+00 insignificant -0.0325127 0.53969587 lowCoverage 1.000000 lowCoverage 0.9406714 0.8369330 0.0906780 5 0.799402 0.6628769 0.13652466 2.6525e-04 9.9921e-01 weaklyHypermeth 8.8418e-03 1.0000e+00 weaklyHypermeth 3.9947e-03 9.9881e-01 weaklyHypermeth 1.7368e-01 1.0000e+00 insignificant 0.1060660 1.2108e-01 lowCoverage 1.0000000 lowCoverage 0.9406714 0.9616822 -0.01816616 5 0.799402 0.831063 -0.0316612 0.92678 2.0051e-01 insignificant 1 1.0000e+00 insignificant 0.80535 5.2825e-01 insignificant 1 1.0000e+00 insignificant -0.0237534 0.66357882 insignificant 1.000000 insignificant 0.8369330 0.9616822 -0.111182 5 0.6628769 0.831063 -0.1681859 9.9650e-01 2.3496e-03 weaklyHypometh 1.0000e+00 7.3424e-02 weaklyHypometh 9.9998e-01 6.6437e-03 weaklyHypometh 1.00000000 0.27681941 insignificant -0.129819 0.10088984 lowCoverage 1.000000 lowCoverage chr4 37346179 37347179 16275 C4orf19 ENSG00000154274 0.8301847 912 37 0.799812 735 39 0.762636 566 37 0.79333054 666 29 0.812174 366 31 0.806465 1148 39 0.8340786 484 26 0.843684 520 34 0.778124 435 32 0.8210567 505 33 0.833275 940 38 0.8141995 247 16 0.812542 747 35 0.861803 124 8 0.928577 500 32 0.784378 211 10 0.7131932 264 15 0.8392329 826 34 0.845877 807 32 0.8117637 941 34 0.84827 401 25 0.8973711 436 26 0.839039 554 31 0.793397 331 24 0.809688 371 26 0.8136363 706 39 0.8331793 545 27 0.883561 138 7 0.834159 528 31 0.784742 887 37 0.8143166 815 39 0.8240280 1105 39 0.8121036 647 35 0.824097 796 35 0.782881 717 34 0.74530 232 18 0.801892 424 19 0.7962253 718 35 0.863482 626 31 0.8394898 825 34 0.8350058 776 29 0.898976 581 31 0.8546516 764 34 0.8855422 0.8276926 0.81291810 0.8775574 0.8379099 0.8516036 0.8531132 0.904893 0.8880377 0.8708777 0.8889153 0.805138 0.8695613 0.86930309 0.931123 0.83767693 0.80815974 0.8732558 0.874299 0.8857328 0.8963634 0.9105890 0.881220 0.8427308 0.8700038 0.87092725 0.8497032 0.895563 0.881425 0.8541137 0.86569995 0.8528167 0.8295131 0.8253421 0.8297662 0.74515 0.846760 0.8205181 0.9021000 0.8919400 0.9014493 0.8946560 0.9051224 12 0.8593436 0.8757518 -0.0097117 35 0.8177612 0.812453 0.00530833 0.6789956 0.0897338 insignificant 1 1.00000 insignificant 0.96714534 1.1779e-01 insignificant 1.00000 1.000000 insignificant -0.01496305 0.2785574 insignificant 1 insignificant 0.8593436 0.8353141 0.0398863 35 0.8177612 0.7986937 0.01906750 8.4235e-07 9.9296e-01 weaklyHypermeth 6.0168e-05 1.0000e+00 weaklyHypermeth 4.5377e-04 9.9893e-01 weaklyHypermeth 5.0419e-02 1.0000e+00 weaklyHypermeth 0.0225691 1.4991e-01 insignificant 1.0000000 insignificant 0.8593436 0.8978163 -0.0271918 32 0.8177612 0.841990 -0.0242284 0.999557 6.8702e-04 weaklyHypometh 1 1.5935e-01 insignificant 0.99904 6.8223e-03 weaklyHypometh 1 7.8465e-01 insignificant -0.0420017 0.01712423 weaklyHypometh 0.912360 insignificant 0.8757518 0.8353141 0.0448489 35 0.812453 0.7986937 0.01375917 1.4087e-07 9.9566e-01 weaklyHypermeth 1.2806e-05 1.0000e+00 weaklyHypermeth 1.1230e-05 9.9993e-01 weaklyHypermeth 1.6043e-03 1.0000e+00 weaklyHypermeth 0.0375321 2.6005e-02 weaklyHypermeth 1.0000000 insignificant 0.8757518 0.8978163 -0.02019067 32 0.812453 0.841990 -0.0295367 0.99606 2.0765e-03 weaklyHypometh 1 4.1529e-01 insignificant 0.99811 4.7663e-02 weaklyHypometh 1 1.0000e+00 insignificant -0.0270386 0.09982404 insignificant 1.000000 insignificant 0.8353141 0.8978163 -0.065064 33 0.7986937 0.841990 -0.0432959 1.0000e+00 4.2341e-08 weaklyHypometh 1.0000e+00 5.2927e-06 weaklyHypometh 1.0000e+00 7.4203e-07 weaklyHypometh 1.00000000 0.00024734 weaklyHypometh -0.064571 0.00304375 weaklyHypometh 0.251227 insignificant chr4 38714479 38715479 16347 TMEM156 ENSG00000121895 0.5404905 167 5 0.570261 484 7 0.558305 106 8 0.53847737 97 5 0.635736 89 7 0.647631 310 8 0.5720170 156 6 0.626902 218 7 0.737139 89 6 0.7812500 71 5 0.525718 303 9 0.5800866 33 3 0.631944 122 6 0.569530 121 5 0.624901 142 6 0.550000 41 3 0.6492669 1708 1 0.5777302 135 6 0.580221 220 5 0.6831225 167 7 0.70379 52 6 1.0000000 8 1 0.627337 101 5 0.723321 70 5 0.578973 58 6 0.5253608 266 8 0.6504850 91 7 0.714591 53 5 0.630454 267 7 0.548206 361 8 0.6531346 298 8 0.6768817 145 6 0.6178980 188 7 0.658751 160 6 0.539073 241 8 0.82143 29 2 0.647143 126 8 0.6112570 283 7 0.488703 159 6 0.7775379 291 5 0.5590394 155 5 0.525000 167 4 0.6385417 112 5 0.6720545 0.6414515 0.69242654 0.6199375 0.6484061 0.6911326 0.6252054 0.737125 0.6976106 0.7813853 0.6272570 0.657446 0.6969697 0.60526501 0.716296 0.53257576 NA 0.6337912 0.670634 0.6942138 0.6447227 0.9585646 0.667692 0.6638076 0.7088906 0.67488409 0.7413420 0.657232 0.698741 0.6808486 0.69440204 0.6502793 0.6746347 0.7254154 0.6590608 0.86526 0.623638 0.7149037 0.6210255 0.7368379 0.6650598 0.7230519 0.7090909 3 0.7734702 0.6485876 0.0017223 6 0.6540477 0.631021 0.02302645 0.4935577 0.8326291 insignificant 1 1.00000 insignificant 0.86266019 3.4409e-01 insignificant 1.00000 1.000000 insignificant -0.06034158 0.1352042 insignificant 1 insignificant 0.7734228 0.6358325 0.0071059 6 0.6194524 0.6202257 -0.00077324 7.5922e-02 1.8275e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.7425e-01 1.8249e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0402219 3.6412e-01 insignificant 1.0000000 insignificant 0.7734228 0.6821267 -0.0115410 4 0.6194524 0.559857 0.0595950 0.215826 7.8368e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.61106 7.0960e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.0112720 0.84188445 insignificant 1.000000 insignificant 0.6481586 0.6358325 0.0057176 6 0.614123 0.6202257 -0.00610233 2.8477e-01 6.2366e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.8507e-01 5.8884e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0201196 7.0558e-01 insignificant 1.0000000 insignificant 0.6481586 0.6821267 -0.00992347 4 0.614123 0.559857 0.0542659 0.58716 7.3332e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.42725 9.3600e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.0716136 0.28284310 insignificant 1.000000 insignificant 0.6358325 0.6821267 -0.013158 4 0.6202257 0.559857 0.0603682 9.5042e-01 5.1297e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 5.1203e-01 9.4586e-01 lowCoverage 1.00000000 1.00000000 lowCoverage 0.051494 0.44569202 insignificant 1.000000 insignificant chr4 38714579 38715579 16348 TMEM156 ENSG00000121895 0.5404905 167 5 0.570261 484 7 0.558305 106 8 0.53847737 97 5 0.635736 89 7 0.647631 310 8 0.5720170 156 6 0.626902 218 7 0.737139 89 6 0.7812500 71 5 0.525718 303 9 0.5800866 33 3 0.631944 122 6 0.569530 121 5 0.624901 142 6 0.550000 41 3 0.6492669 1708 1 0.5777302 135 6 0.580221 220 5 0.6831225 167 7 0.70379 52 6 1.0000000 8 1 0.627337 101 5 0.723321 70 5 0.578973 58 6 0.5253608 266 8 0.6504850 91 7 0.714591 53 5 0.630454 267 7 0.548206 361 8 0.6531346 298 8 0.6768817 145 6 0.6178980 188 7 0.658751 160 6 0.539073 241 8 0.82143 29 2 0.647143 126 8 0.6112570 283 7 0.488703 159 6 0.7775379 291 5 0.5590394 155 5 0.525000 167 4 0.6385417 112 5 0.6720545 0.6414515 0.69242654 0.6199375 0.6484061 0.6911326 0.6252054 0.737125 0.6976106 0.7813853 0.6272570 0.657446 0.6969697 0.60526501 0.716296 0.53257576 NA 0.6337912 0.670634 0.6942138 0.6447227 0.9585646 0.667692 0.6638076 0.7088906 0.67488409 0.7413420 0.657232 0.698741 0.6808486 0.69440204 0.6502793 0.6746347 0.7254154 0.6590608 0.86526 0.623638 0.7149037 0.6210255 0.7368379 0.6650598 0.7230519 0.7090909 3 0.7734702 0.6485876 0.0017223 6 0.6540477 0.631021 0.02302645 0.4935577 0.8326291 insignificant 1 1.00000 insignificant 0.86266019 3.4409e-01 insignificant 1.00000 1.000000 insignificant -0.06034158 0.1352042 insignificant 1 insignificant 0.7734228 0.6358325 0.0071059 6 0.6194524 0.6202257 -0.00077324 7.5922e-02 1.8275e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.7425e-01 1.8249e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0402219 3.6412e-01 insignificant 1.0000000 insignificant 0.7734228 0.6821267 -0.0115410 4 0.6194524 0.559857 0.0595950 0.215826 7.8368e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.61106 7.0960e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.0112720 0.84188445 insignificant 1.000000 insignificant 0.6481586 0.6358325 0.0057176 6 0.614123 0.6202257 -0.00610233 2.8477e-01 6.2366e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.8507e-01 5.8884e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0201196 7.0558e-01 insignificant 1.0000000 insignificant 0.6481586 0.6821267 -0.00992347 4 0.614123 0.559857 0.0542659 0.58716 7.3332e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.42725 9.3600e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.0716136 0.28284310 insignificant 1.000000 insignificant 0.6358325 0.6821267 -0.013158 4 0.6202257 0.559857 0.0603682 9.5042e-01 5.1297e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 5.1203e-01 9.4586e-01 lowCoverage 1.00000000 1.00000000 lowCoverage 0.051494 0.44569202 insignificant 1.000000 insignificant chr4 39406379 39407379 16363 UBE2K ENSG00000078140 0.7461686 179 5 0.647989 120 5 0.678266 117 5 0.78102453 87 4 NA 0 0 0.794522 90 4 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 0.8286935 110 5 NA 0 0 0.8321942 93 4 NA 0 0 NA 0 0 0.809957 89 5 NA 0 0 NA 0 0 0.8236321 154 5 NA 0 0 NA 0 0 NA 0 0 0.835936 155 5 0.7849434 116 5 0.8717805 119 5 0.6991118 143 5 NA 0 0 0.722381 54 5 NA 0 0 NA 0 0 0.7749316 150 5 0.896966 141 4 0.8447542 169 5 0.7993443 161 5 0.847147 149 4 0.8206950 125 5 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0.7185930 0.7977883 -0.0816233 4 0.7388382 0.821619 -0.08278094 0.9963973 0.0108846 lowCoverage 1 1.00000 lowCoverage 0.99782991 7.3891e-02 lowCoverage 1.00000 1.000000 lowCoverage -0.06684142 0.0582902 lowCoverage 1 lowCoverage 0.7185930 0.7175793 -0.0168440 3 0.7388382 0.7494076 -0.01056940 7.5182e-01 5.3731e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 5.8576e-01 5.9404e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0262668 4.7974e-01 lowCoverage 1.0000000 lowCoverage 0.7185930 0.8147651 -0.1006965 4 0.7388382 0.837312 -0.0984741 0.999906 1.6896e-03 lowCoverage 1 2.4138e-01 lowCoverage 0.99981 5.9557e-03 lowCoverage 1 7.8465e-01 lowCoverage -0.0833730 0.02657509 lowCoverage 1.000000 lowCoverage 0.7977883 0.7175793 0.0769115 4 0.821619 0.7494076 0.07221154 3.7568e-03 9.3265e-01 lowCoverage 8.9448e-02 1.0000e+00 lowCoverage 1.0782e-02 9.7213e-01 lowCoverage 3.1160e-01 1.0000e+00 lowCoverage 0.0931082 2.8703e-02 lowCoverage 1.0000000 lowCoverage 0.7977883 0.8147651 -0.02079832 5 0.821619 0.837312 -0.0156932 0.77710 2.4556e-01 insignificant 1 1.0000e+00 insignificant 0.72448 5.0913e-01 insignificant 1 1.0000e+00 insignificant -0.0165316 0.46952148 lowCoverage 1.000000 lowCoverage 0.7175793 0.8147651 -0.093150 4 0.7494076 0.837312 -0.0879047 9.9964e-01 9.9661e-05 lowCoverage 1.0000e+00 5.2453e-03 lowCoverage 9.8860e-01 6.7365e-04 lowCoverage 1.00000000 0.05181953 lowCoverage -0.109640 0.01595655 lowCoverage 0.668667 lowCoverage chr4 40144679 40145679 16395 CHRNA9 ENSG00000174343 0.7182343 247 8 0.788801 268 8 0.684936 178 8 0.80524533 198 8 0.800645 143 8 0.744847 426 9 0.8065997 270 9 0.788025 167 8 0.711110 186 9 0.6712469 156 8 0.784776 303 8 0.7489949 147 8 0.783026 208 8 0.625000 16 2 0.812324 209 8 0.640141 119 8 0.7456561 133 8 0.6557735 199 8 0.789397 187 8 0.7053028 401 8 0.78733 92 8 0.8001208 103 8 0.802798 201 8 0.681205 90 8 0.791667 103 7 0.7702819 286 8 0.7485746 129 8 0.794951 111 8 0.673050 182 8 0.811934 333 9 0.6706132 336 8 0.8047540 419 8 0.7034108 187 8 0.638272 186 8 0.720451 204 8 0.64898 75 6 0.770573 171 8 0.6678695 268 8 0.800689 266 8 0.8341988 271 8 0.7827160 185 8 0.795118 182 8 0.7453091 278 8 0.7267461 0.7753171 0.74002854 0.7852387 0.7975239 0.7076129 0.7850832 0.830686 0.7963042 0.7631758 0.7969985 0.755402 0.7990181 0.74577654 0.816639 0.71747496 0.74609308 0.7886230 0.766247 0.7993933 0.7841477 0.7817939 0.787367 0.7739318 0.7902588 0.77907855 0.7247798 0.822578 0.756805 0.7726333 0.76149676 0.7632283 0.6714568 0.6687632 0.7345868 0.66231 0.753287 0.6849879 0.7803521 0.8207513 0.7599831 0.7786560 0.7515675 8 0.7565489 0.7647799 -0.0028021 8 0.7419593 0.770812 -0.02885243 0.8457807 0.3171162 insignificant 1 1.00000 insignificant 0.85223026 1.3988e-01 insignificant 1.00000 1.000000 insignificant -0.02093598 0.3239176 insignificant 1 insignificant 0.7565489 0.6892759 0.0673365 8 0.7419593 0.7322620 0.00969731 8.3400e-06 9.8361e-01 weaklyHypermeth 4.6333e-04 1.0000e+00 weaklyHypermeth 6.4396e-04 9.8703e-01 weaklyHypermeth 6.1088e-02 1.0000e+00 weaklyHypermeth 0.0489109 7.3500e-02 insignificant 1.0000000 insignificant 0.7565489 0.7724196 -0.0053062 8 0.7419593 0.792243 -0.0502837 0.826864 2.3976e-02 weaklyHypometh 1 1.0000e+00 insignificant 0.78377 2.5447e-02 weaklyHypometh 1 1.0000e+00 insignificant -0.0511023 0.02336155 weaklyHypometh 1.000000 insignificant 0.7647799 0.6892759 0.0694850 8 0.770812 0.7322620 0.03854973 1.2873e-05 9.9711e-01 weaklyHypermeth 6.7754e-04 1.0000e+00 weaklyHypermeth 4.9387e-04 9.9964e-01 weaklyHypermeth 3.5277e-02 1.0000e+00 weaklyHypermeth 0.0698469 2.0285e-02 weaklyHypermeth 1.0000000 insignificant 0.7647799 0.7724196 -0.00562809 8 0.770812 0.792243 -0.0214313 0.78705 3.5636e-02 weaklyHypometh 1 1.0000e+00 insignificant 0.75367 1.8306e-01 insignificant 1 1.0000e+00 insignificant -0.0301663 0.18220806 insignificant 1.000000 insignificant 0.6892759 0.7724196 -0.074335 8 0.7322620 0.792243 -0.0599810 9.6043e-01 4.4531e-05 weaklyHypometh 1.0000e+00 2.6194e-03 weaklyHypometh 9.9918e-01 5.7482e-04 weaklyHypometh 1.00000000 0.04790145 weaklyHypometh -0.100013 0.00336997 weaklyHypometh 0.251227 insignificant chr4 40228779 40229779 16399 RBM47 ENSG00000163694 0.7262705 79 5 0.526403 90 5 0.532605 78 5 0.75614035 93 5 0.741818 43 5 0.724087 151 5 0.6257576 58 5 0.684211 110 5 0.628571 48 5 0.7015873 63 5 0.760647 157 5 0.6166667 16 0 0.792157 98 5 0.816667 34 5 0.699722 55 5 0.500000 15 0 0.8333333 7 0 0.6891193 132 5 0.747273 89 5 0.7771094 97 5 0.40816 27 2 0.8028571 45 5 0.731364 70 5 0.669048 29 4 0.655000 35 4 0.7839027 116 5 0.4992530 66 5 0.700000 14 0 0.782473 73 5 0.764701 89 5 0.8169113 81 5 0.7492488 145 5 0.6445578 79 5 0.643346 62 5 0.741051 88 5 0.80000 14 0 0.601111 30 2 0.7863492 101 5 0.795421 66 5 0.7121612 67 5 0.7577277 100 5 0.671190 41 5 0.7998950 84 5 0.7293762 0.5259280 0.55814456 0.7589626 0.7500000 0.7241866 0.6265646 0.688152 0.6327640 0.7063665 0.7573170 0.612319 0.7936647 0.82110507 0.693901 0.53260870 0.82608696 0.6949008 0.744291 0.7801569 0.5797101 0.8052795 0.736537 0.7463768 0.6657609 0.89756616 0.7004334 0.695652 0.782480 0.7275727 0.74213782 0.7492527 0.5098344 0.5857322 0.7435842 0.80435 0.615942 0.7996894 0.8046265 0.7001752 0.7557571 0.6715321 0.7125160 0 0.7144746 0.7665816 -0.0534856 5 0.7530803 0.698748 0.05433227 0.9713112 0.0257777 weaklyHypometh 1 1.00000 insignificant 0.88837476 2.2583e-01 insignificant 1.00000 1.000000 insignificant -0.00290284 0.9457926 lowCoverage 1 lowCoverage 0.7144746 0.6747312 0.0402068 5 0.7530803 0.7182922 0.03478813 1.2254e-01 9.6709e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.1365e-01 9.8316e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0087286 8.3341e-01 lowCoverage 1.0000000 lowCoverage 0.7144746 0.7394958 -0.0332460 5 0.7530803 0.781650 -0.0285699 0.886257 2.1912e-01 insignificant 1 1.0000e+00 insignificant 0.81183 2.3760e-01 insignificant 1 1.0000e+00 insignificant -0.0532718 0.13138266 lowCoverage 1.000000 lowCoverage 0.7645570 0.6764706 0.0893741 5 0.670355 0.7585361 -0.08818069 3.2709e-03 8.1175e-01 weaklyHypermeth 8.3869e-02 1.0000e+00 weaklyHypermeth 1.2257e-01 8.3086e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0058257 9.0869e-01 lowCoverage 1.0000000 lowCoverage 0.7645570 0.7402235 0.02092870 5 0.670355 0.812843 -0.1424876 0.46543 5.2947e-01 insignificant 1 1.0000e+00 insignificant 0.46772 5.2199e-01 insignificant 1 1.0000e+00 insignificant -0.0503690 0.26967267 lowCoverage 1.000000 lowCoverage 0.6764706 0.7402235 -0.067596 5 0.7585361 0.812843 -0.0543069 9.9565e-01 8.2293e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7552e-01 4.1038e-01 insignificant 1.00000000 1.00000000 insignificant -0.044543 0.32007136 lowCoverage 1.000000 lowCoverage chr4 40259279 40260279 16402 RBM47 ENSG00000163694 0.6968876 469 7 0.639807 353 7 0.589793 131 7 0.83792972 340 7 0.724337 116 7 0.673650 398 7 0.6494710 158 7 0.585890 112 7 0.624494 132 7 0.6702098 109 7 0.668136 325 7 0.5961538 59 5 0.678431 122 7 0.909091 32 3 0.695319 137 7 0.662338 53 5 0.5816831 1185 7 0.7849286 477 7 0.781891 256 7 0.7025319 371 7 0.72579 59 7 0.6972194 74 7 0.662956 177 7 0.680612 78 7 0.717414 136 7 0.6789249 360 7 0.7515306 38 4 0.704762 40 5 0.722127 228 7 0.658825 424 7 0.7063269 445 7 0.6917813 518 7 0.7253265 214 7 0.606094 170 7 0.681886 269 7 0.72976 50 5 0.725982 103 7 0.7001864 367 7 0.742836 418 7 0.7138509 424 7 0.7699991 537 7 0.726830 458 7 0.7988812 462 7 0.7082497 0.6536551 0.60439174 0.8384679 0.7214021 0.6823373 0.6673520 0.605418 0.6248035 0.6703483 0.6892664 0.698365 0.6772767 0.70110889 0.700148 0.66424242 0.57857228 0.8008372 0.795931 0.7103161 0.7386914 0.6929733 0.670131 0.6768254 0.7246579 0.68457350 0.7486984 0.765926 0.724088 0.6691325 0.71287669 0.6983957 0.7302181 0.6068113 0.6404296 0.76012 0.739739 0.7043417 0.7404434 0.7255355 0.7762611 0.7292487 0.8105073 5 0.8228679 0.8094684 0.0025266 7 0.7026918 0.693566 0.00912590 0.5331732 0.7601052 insignificant 1 1.00000 insignificant 0.96691477 5.1249e-02 insignificant 1.00000 1.000000 insignificant -0.01220744 0.5621049 insignificant 1 insignificant 0.8228679 0.8005115 0.0158221 7 0.7026918 0.6945003 0.00819150 3.1299e-01 3.8096e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7014e-01 2.3998e-02 inconclusive 1.0000e+00 1.0000e+00 insignificant -0.0072242 7.9441e-01 insignificant 1.0000000 insignificant 0.8228679 0.8220966 -0.0264077 7 0.7026918 0.750549 -0.0478574 0.990011 8.4817e-02 insignificant 1 1.0000e+00 insignificant 0.99860 8.6312e-03 weaklyHypometh 1 7.8465e-01 insignificant -0.0628309 0.02015190 weaklyHypometh 1.000000 insignificant 0.8094684 0.8005115 0.0134166 7 0.693566 0.6945003 -0.00093440 5.2473e-01 1.2033e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.9415e-01 3.3762e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0049832 8.1824e-01 insignificant 1.0000000 insignificant 0.8094684 0.8220966 -0.03071662 7 0.693566 0.750549 -0.0569833 0.98320 1.1942e-03 weaklyHypometh 1 3.9807e-01 insignificant 0.89485 4.7219e-02 weaklyHypometh 1 1.0000e+00 insignificant -0.0506235 0.02473365 weaklyHypometh 1.000000 insignificant 0.8005115 0.8220966 -0.043203 7 0.6945003 0.750549 -0.0560489 8.9577e-01 7.4847e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 5.1802e-01 7.5623e-01 insignificant 1.00000000 1.00000000 insignificant -0.055607 0.05084759 insignificant 1.000000 insignificant chr4 40984879 40985879 16428 UCHL1 ENSG00000154277 0.7321554 576 7 0.647671 226 8 0.805207 109 7 0.85127738 383 7 0.718025 101 8 0.872455 481 7 0.7611689 154 7 0.910391 159 6 0.859287 67 5 0.7896998 79 5 0.770854 279 7 0.7875000 42 4 0.908550 89 5 0.811111 77 5 0.721781 141 5 1.000000 7 0 NA 0 0 0.8956508 735 6 0.785030 244 6 0.8171303 350 7 0.71852 54 7 0.9821429 63 4 0.604594 187 7 0.841667 21 0 0.833867 304 6 0.7520625 287 9 0.6855340 147 5 0.748148 48 6 0.686479 227 6 0.837991 312 7 0.8748263 300 7 0.6954273 305 7 0.6835578 181 7 0.670281 232 5 0.833333 103 5 0.86951 114 3 0.667374 142 7 0.8620418 330 5 0.601330 464 7 0.8641141 380 8 0.9606207 623 7 0.924070 458 5 0.9607528 423 7 0.9513454 0.9077800 0.91721362 0.9661534 0.9526631 0.9757621 0.8786425 0.950422 0.8897601 0.9231438 0.9592154 0.952294 0.9418265 0.91032110 0.960718 0.99587399 NA 0.9400292 0.908116 0.9059170 0.9908257 0.9709480 0.947703 0.9365443 0.9398838 0.97939987 0.9546986 0.978593 0.938676 0.9554087 0.95092096 0.9380464 0.8472292 0.8036270 0.8143279 0.94048 0.866645 0.8643264 0.9581904 0.9563095 0.9520837 0.9190111 0.9695822 1 0.9138934 0.9209942 -0.0137598 6 0.6204343 0.579719 0.04071505 0.9480815 0.4609069 insignificant 1 1.00000 insignificant 0.95559368 3.4865e-01 insignificant 1.00000 1.000000 insignificant 0.04112033 0.2637378 insignificant 1 insignificant 0.9165693 0.8030853 0.1274398 6 0.6565324 0.6356378 0.02089458 1.2661e-06 9.7451e-01 weaklyHypermeth 8.4407e-05 1.0000e+00 weaklyHypermeth 9.7488e-02 9.9778e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0485429 3.1631e-01 insignificant 1.0000000 insignificant 0.9168813 0.9378194 -0.0154803 7 0.6558775 0.674079 -0.0182011 0.968111 2.9322e-01 insignificant 1 1.0000e+00 insignificant 0.88500 7.2518e-01 insignificant 1 1.0000e+00 insignificant -0.0492857 0.51622512 insignificant 1.000000 insignificant 0.9221876 0.8038147 0.1383548 6 0.692370 0.6934230 -0.00105304 6.7605e-06 3.5285e-01 weaklyHypermeth 3.9768e-04 1.0000e+00 weaklyHypermeth 5.5347e-02 8.8446e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0074226 8.8663e-01 insignificant 1.0000000 insignificant 0.9247649 0.9378194 -0.00043532 6 0.656656 0.674079 -0.0174229 0.81050 4.8339e-01 insignificant 1 1.0000e+00 insignificant 0.48784 9.1655e-01 insignificant 1 1.0000e+00 insignificant -0.0904060 0.27010982 insignificant 1.000000 insignificant 0.8040109 0.9385928 -0.130333 6 0.7364059 0.768318 -0.0319123 9.9607e-01 7.1531e-04 weaklyHypometh 1.0000e+00 2.7512e-02 weaklyHypometh 9.9564e-01 1.8199e-01 insignificant 1.00000000 1.00000000 insignificant -0.097829 0.25677817 insignificant 1.000000 insignificant chr4 41080979 41081979 16436 LIMCH1 ENSG00000064042 0.7090301 130 8 0.596726 83 6 0.469048 73 6 0.74267399 127 6 0.566651 61 8 0.653452 205 8 0.4791667 54 7 0.681845 119 6 0.600000 61 7 0.7731481 35 4 0.702766 167 7 0.5625000 23 2 0.720841 79 8 0.730208 44 5 0.808862 93 6 0.428571 35 4 0.0714286 14 0 0.7500509 100 8 0.787619 87 8 0.6582084 143 8 0.86420 44 4 0.6944444 48 6 0.723106 50 8 0.478952 67 7 0.799242 62 6 0.7547339 96 8 0.8079545 49 2 0.489583 21 1 0.696296 74 8 0.625057 121 8 0.7134804 133 7 0.6085488 217 8 0.7737179 48 6 0.501089 82 8 0.446886 60 4 0.46250 27 1 0.555025 56 7 0.7195988 100 6 0.720899 103 8 0.7958333 110 8 0.6855769 115 6 0.701667 54 7 0.8080628 116 8 0.7108511 0.6339286 0.47135766 0.8600693 0.5109245 0.7370694 0.4352355 0.669513 0.6260870 0.7699275 0.7220926 0.574275 0.7027381 0.75452899 0.797684 0.51700141 0.06374896 0.8456362 0.803002 0.6803965 0.8659420 0.7258454 0.737286 0.5052897 0.8003953 0.76199290 0.8065876 0.501812 0.793478 0.6603902 0.70432956 0.6756771 0.8032051 0.5090744 0.4865210 0.56735 0.554934 0.6921498 0.6890528 0.8132246 0.7124916 0.7599638 0.8196405 0 0.7247548 0.7627291 -0.0208472 8 0.6887334 0.639826 0.04890714 0.8332150 0.3918632 insignificant 1 1.00000 insignificant 0.98155206 1.8819e-01 insignificant 1.00000 1.000000 insignificant -0.06332656 0.2276437 insignificant 1 insignificant 0.7256944 0.6327078 0.1049542 6 0.7208149 0.5959314 0.12488354 3.6365e-03 9.9972e-01 weaklyHypermeth 8.6584e-02 1.0000e+00 weaklyHypermeth 1.8512e-01 9.9256e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0481704 4.9479e-01 insignificant 1.0000000 insignificant 0.7247548 0.7971888 -0.0755724 8 0.6887334 0.706840 -0.0181064 0.997733 6.4524e-02 insignificant 1 1.0000e+00 insignificant 0.99834 3.9644e-02 weaklyHypometh 1 1.0000e+00 insignificant -0.1177680 0.01733484 weaklyHypometh 0.912360 insignificant 0.7656090 0.6327078 0.1265696 6 0.688696 0.5959314 0.09276450 8.0150e-04 9.9973e-01 weaklyHypermeth 2.4288e-02 1.0000e+00 weaklyHypermeth 1.1312e-02 9.9987e-01 weaklyHypermeth 3.1160e-01 1.0000e+00 insignificant 0.1114970 1.2640e-01 insignificant 1.0000000 insignificant 0.7627291 0.7971888 -0.05552572 8 0.639826 0.706840 -0.0670135 0.98759 5.2569e-02 insignificant 1 1.0000e+00 insignificant 0.95938 2.7990e-01 insignificant 1 1.0000e+00 insignificant -0.0544414 0.22187242 insignificant 1.000000 insignificant 0.6327078 0.7987928 -0.182873 6 0.5959314 0.785378 -0.1894462 9.9998e-01 1.1835e-04 weaklyHypometh 1.0000e+00 5.9173e-03 weaklyHypometh 9.9999e-01 1.0051e-03 weaklyHypometh 1.00000000 0.06700844 weaklyHypometh -0.165938 0.03176798 weaklyHypometh 1.000000 insignificant chr4 41122279 41123279 16444 LIMCH1 ENSG00000064042 0.8316905 446 14 0.757088 123 9 0.625865 164 11 0.87971698 396 14 0.846429 71 5 0.802486 342 15 0.8724858 80 8 0.753466 115 8 0.696955 73 6 0.9532425 109 10 0.886246 268 12 0.9022727 73 5 0.945635 141 11 NA 0 0 0.912500 87 9 0.946970 68 5 0.7483766 71 7 0.9080133 353 13 0.844354 154 12 0.8633321 335 14 0.92857 50 4 0.8336757 114 11 0.868149 229 14 0.726032 52 5 0.861310 95 6 0.7587961 219 14 0.8194963 117 9 0.966667 38 3 0.778968 87 9 0.849047 236 12 0.8443662 194 11 0.8663549 388 14 0.8625690 124 11 0.662515 139 11 0.803635 264 14 0.83192 61 8 0.711172 57 3 0.7720785 223 12 0.851131 432 14 0.8842555 442 14 0.8944872 390 14 0.929717 314 13 0.8762172 408 14 0.8823986 0.7864736 0.79130110 0.9107200 0.8755376 0.8193898 0.8855156 0.853559 0.9102732 0.9383944 0.9208046 0.887195 0.9031959 NA 0.941756 0.89866404 0.75785970 0.9224887 0.843194 0.8872517 0.9865591 0.8363847 0.960377 0.8265745 0.9232465 0.87620421 0.9144854 0.951986 0.869788 0.9120521 0.88214506 0.8835403 0.8559881 0.7076833 0.7952779 0.83534 0.762793 0.8579811 0.9146385 0.9626425 0.9340585 0.9527926 0.9171631 3 0.8679735 0.8581638 -0.0025114 13 0.8651221 0.836165 0.02895685 0.7222401 0.3402632 insignificant 1 1.00000 insignificant 0.87426803 1.0817e-01 insignificant 1.00000 1.000000 insignificant -0.00088481 0.9752732 insignificant 1 insignificant 0.8678592 0.8133641 0.0519060 13 0.8471384 0.7863739 0.06076455 5.9826e-05 9.9731e-01 weaklyHypermeth 2.7194e-03 1.0000e+00 weaklyHypermeth 3.1028e-03 9.8054e-01 weaklyHypermeth 1.7238e-01 1.0000e+00 insignificant 0.0669190 1.0128e-01 insignificant 1.0000000 insignificant 0.8679735 0.9003021 -0.0304421 13 0.8651221 0.894265 -0.0291432 0.990123 4.7195e-03 weaklyHypometh 1 3.9911e-01 insignificant 0.96147 4.0984e-02 weaklyHypometh 1 1.0000e+00 insignificant -0.0462603 0.07058995 insignificant 1.000000 insignificant 0.8583241 0.8133641 0.0601437 12 0.847654 0.7863739 0.06128012 1.1149e-05 9.9394e-01 weaklyHypermeth 6.1937e-04 1.0000e+00 weaklyHypermeth 4.4709e-04 9.9769e-01 weaklyHypermeth 3.5277e-02 1.0000e+00 weaklyHypermeth 0.0678038 9.5011e-02 insignificant 1.0000000 insignificant 0.8581638 0.9003021 -0.02456612 13 0.836165 0.894265 -0.0581000 0.99628 1.3052e-01 insignificant 1 1.0000e+00 insignificant 0.96735 6.7622e-01 insignificant 1 1.0000e+00 insignificant -0.0453755 0.07009900 insignificant 1.000000 insignificant 0.8133641 0.9002016 -0.077379 12 0.7863739 0.880167 -0.0937935 9.6998e-01 3.0421e-07 weaklyHypometh 1.0000e+00 3.0421e-05 weaklyHypometh 9.9895e-01 5.8513e-05 weaklyHypometh 1.00000000 0.00731414 weaklyHypometh -0.113179 0.01254161 weaklyHypometh 0.597220 insignificant chr4 46891179 46892179 16527 GABRB1 ENSG00000163288 0.7378475 177 7 0.633838 162 7 0.629193 96 7 0.66424991 121 7 0.558673 52 6 0.677647 225 6 0.6182603 122 7 0.647601 160 7 0.582155 100 7 0.5613922 100 7 0.714468 204 7 0.5915131 59 5 0.462001 129 6 0.500000 22 3 0.691604 97 7 0.514814 79 5 0.5443723 54 4 0.7563298 129 6 0.705589 185 7 0.7091220 198 7 0.53415 66 5 0.5415997 64 7 0.660600 159 7 0.547222 67 6 0.601190 33 5 0.6333457 184 7 0.6089744 80 6 0.705456 88 5 0.620377 117 7 0.588901 178 7 0.6000657 170 6 0.5720633 228 7 0.5464155 115 6 0.514446 81 7 0.582256 181 7 0.74167 57 5 0.510392 122 6 0.7016859 154 7 0.780270 226 7 0.6304074 185 7 0.6493863 128 7 0.535733 115 5 0.6309060 170 7 0.7588772 0.6672542 0.65820416 0.7300325 0.6375000 0.7210428 0.6415434 0.706694 0.6438989 0.6659921 0.6568223 0.677697 0.6660999 0.68659778 0.702105 0.58797661 0.61391185 0.7634350 0.704458 0.6701557 0.6870409 0.6285832 0.670895 0.6152020 0.6386364 0.69180313 0.6888258 0.721190 0.672440 0.6713302 0.64699883 0.6316983 0.6163586 0.5874980 0.6065792 0.69951 0.582419 0.6879396 0.7259515 0.7009493 0.7131077 0.7174052 0.7095553 5 0.6693646 0.6450488 0.0222742 7 0.6999191 0.600527 0.09939244 0.0743881 0.9424830 insignificant 1 1.00000 insignificant 0.05425071 9.1213e-01 insignificant 1.00000 1.000000 insignificant 0.02387112 0.3217155 insignificant 1 insignificant 0.6688444 0.6098592 0.0593523 7 0.6686752 0.6589475 0.00972774 1.1878e-02 9.9760e-01 weaklyHypermeth 2.4240e-01 1.0000e+00 insignificant 1.1206e-01 9.9299e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0255567 5.8320e-01 insignificant 1.0000000 insignificant 0.6690968 0.7111650 -0.0213528 7 0.6726390 0.679177 -0.0065383 0.881229 3.9569e-01 insignificant 1 1.0000e+00 insignificant 0.98382 2.6337e-01 insignificant 1 1.0000e+00 insignificant -0.0203069 0.65647063 insignificant 1.000000 insignificant 0.6437588 0.6098592 0.0361821 7 0.522924 0.6589475 -0.13602303 2.2775e-01 8.5822e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.0264e-01 8.1082e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0016856 9.6988e-01 insignificant 1.0000000 insignificant 0.6448011 0.7111650 -0.04396084 7 0.564211 0.679177 -0.1149664 0.99310 4.2683e-03 weaklyHypometh 1 4.7426e-01 insignificant 0.99866 1.5075e-02 weaklyHypometh 1 1.0000e+00 insignificant -0.0441780 0.33729449 insignificant 1.000000 insignificant 0.6098592 0.7113276 -0.080830 7 0.6589475 0.663439 -0.0044914 9.9707e-01 3.7700e-03 weaklyHypometh 1.0000e+00 1.0772e-01 insignificant 9.9964e-01 3.4324e-02 weaklyHypometh 1.00000000 0.90325203 insignificant -0.045864 0.43610108 insignificant 1.000000 insignificant chr4 47824879 47825879 16539 ENSG00000210391 0.8502313 168 5 0.823396 103 5 0.792471 107 5 0.87200436 108 6 0.893333 38 5 0.880964 357 6 0.8894872 106 5 0.776734 91 5 0.653889 44 5 0.8058333 79 5 0.822599 127 5 0.9377778 47 5 0.827167 75 5 NA 0 0 0.975000 75 5 0.833333 36 5 0.8002061 110 6 0.8948249 170 6 0.855416 99 5 0.8570792 229 6 0.85841 47 5 0.8356725 80 5 0.849183 125 6 0.909524 46 5 0.826667 21 3 0.8619121 125 5 0.8611111 51 5 0.765000 35 4 0.825625 72 5 0.780598 135 5 0.8170448 77 5 0.8240385 309 6 0.7420290 105 5 0.653571 51 5 0.803152 125 5 0.80842 85 5 0.833333 20 1 0.7960920 144 5 0.875260 160 5 0.8258481 204 6 0.9157978 142 5 0.905911 155 5 0.9136612 206 6 0.8196088 0.8237781 0.79184679 0.8474312 0.8937984 0.8592385 0.8896616 0.775049 0.6525678 0.8085514 0.8227570 0.937984 0.8263214 NA 0.974564 0.84011628 0.76941826 0.8853227 0.853599 0.8395719 0.8565245 0.8363763 0.828781 0.9098837 0.8313953 0.86236845 0.8599806 0.765552 0.826327 0.7807658 0.81677863 0.8339493 0.7403943 0.6550042 0.8019213 0.80354 0.828488 0.7951617 0.8737893 0.7873367 0.8993653 0.8866129 0.8959848 5 0.8570770 0.8397150 0.0102013 5 0.8620914 0.840178 0.02191368 0.2403235 0.9403989 insignificant 1 1.00000 insignificant 0.40947446 9.0665e-01 insignificant 1.00000 1.000000 insignificant 0.00973673 0.6149848 lowCoverage 1 lowCoverage 0.8493083 0.7773585 0.0650791 5 0.8414062 0.7754696 0.06593665 6.1473e-04 9.8433e-01 weaklyHypermeth 1.9830e-02 1.0000e+00 weaklyHypermeth 1.3056e-02 8.6988e-01 weaklyHypermeth 4.5021e-01 1.0000e+00 insignificant 0.0715370 4.7542e-02 lowCoverage 1.0000000 lowCoverage 0.8570770 0.8823529 -0.0258863 6 0.8620914 0.890026 -0.0279344 0.966803 1.4332e-02 weaklyHypometh 1 8.9574e-01 insignificant 0.98568 2.0439e-02 weaklyHypometh 1 1.0000e+00 insignificant -0.0429934 0.08771087 insignificant 1.000000 insignificant 0.8386801 0.7773585 0.0571447 5 0.833213 0.7754696 0.05774368 1.0488e-04 9.5671e-01 weaklyHypermeth 3.8844e-03 1.0000e+00 weaklyHypermeth 7.7495e-03 8.2554e-01 weaklyHypermeth 2.4217e-01 1.0000e+00 insignificant 0.0618003 7.1963e-02 lowCoverage 1.0000000 lowCoverage 0.8397150 0.8823529 -0.03697162 5 0.840178 0.890026 -0.0498481 0.97930 2.5230e-03 weaklyHypometh 1 4.2049e-01 insignificant 0.99813 4.3495e-03 weaklyHypometh 1 1.0000e+00 insignificant -0.0527301 0.03293678 lowCoverage 1.000000 lowCoverage 0.7773585 0.8772563 -0.092284 5 0.7754696 0.868031 -0.0925614 9.9970e-01 3.6182e-03 weaklyHypometh 1.0000e+00 1.0772e-01 insignificant 9.9801e-01 4.5159e-02 weaklyHypometh 1.00000000 1.00000000 insignificant -0.114530 0.00665105 lowCoverage 0.371784 lowCoverage chr4 52397379 52398379 16597 ENSG00000223099 0.7564241 188 5 0.589131 132 5 0.438182 48 5 0.89975620 179 5 0.689286 36 5 0.798472 210 5 0.6239130 35 1 0.810992 85 5 0.666667 6 0 0.8750000 26 4 0.793935 142 5 0.6666667 17 0 0.819654 87 4 0.800000 10 0 0.818182 46 4 1.000000 4 0 1.0000000 88 1 0.7817331 142 5 0.856989 53 5 0.7653190 157 5 0.66875 25 3 0.8800000 43 4 0.856618 81 5 0.769697 34 4 0.803419 92 5 0.8886335 94 5 0.5933333 17 1 0.562500 12 0 0.858796 50 5 0.726294 107 5 0.9166667 88 5 0.8012492 182 5 0.5841026 62 5 0.536852 63 5 0.748242 90 5 0.83333 51 1 0.828373 64 5 0.6710237 91 5 0.723810 118 5 0.7035659 146 5 0.8009332 167 5 0.710000 75 5 0.8314775 148 5 0.7559572 0.7427887 0.43499142 0.8789293 0.6910377 0.7976284 0.6216161 0.812312 0.6037736 0.7924528 0.7918475 0.660377 0.8185085 0.81132075 0.816467 0.84441843 1.00000000 0.7846367 0.826780 0.7629215 0.6811321 0.8792453 0.830882 0.6832476 0.7680213 0.79956625 0.6031447 0.835372 0.828354 0.7238173 0.85377358 0.7604532 0.5875181 0.5446191 0.7511332 0.83648 0.732854 0.6724358 0.7284367 0.7080933 0.8028775 0.7144654 0.8021029 0 0.7971614 0.7866667 0.0058714 5 0.7849175 0.794207 -0.00928922 0.6790329 0.6552834 insignificant 1 1.00000 insignificant 0.69686485 8.0999e-01 insignificant 1.00000 1.000000 insignificant -0.00464796 0.9189169 lowCoverage 1 lowCoverage 0.7973934 0.6199525 0.1815384 5 0.7996989 0.7953604 0.00433853 9.7768e-03 9.9016e-01 weaklyHypermeth 2.0450e-01 1.0000e+00 insignificant 7.4406e-02 9.9833e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0721941 2.5293e-01 lowCoverage 1.0000000 lowCoverage 0.7975059 0.7048930 0.0642833 5 0.8162652 0.793385 0.0228807 0.034125 6.4951e-01 weaklyHypermeth 1 1.0000e+00 insignificant 0.20838 8.5694e-01 insignificant 1 1.0000e+00 insignificant 0.0185579 0.64701278 lowCoverage 1.000000 lowCoverage 0.7867647 0.6199525 0.1429598 5 0.796260 0.7953604 0.00090001 5.2726e-02 9.8892e-01 insignificant 8.9366e-01 1.0000e+00 insignificant 2.2165e-01 9.9611e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0768420 2.3797e-01 lowCoverage 1.0000000 lowCoverage 0.7871287 0.7048930 0.04698771 5 0.817236 0.793385 0.0238515 0.33936 7.8978e-01 insignificant 1 1.0000e+00 insignificant 0.50778 8.7836e-01 insignificant 1 1.0000e+00 insignificant 0.0232058 0.59528321 lowCoverage 1.000000 lowCoverage 0.6181384 0.7048930 -0.085947 5 0.7271471 0.793385 -0.0662374 9.9830e-01 4.4406e-02 weaklyHypometh 1.0000e+00 8.5396e-01 insignificant 9.9963e-01 3.9266e-02 weaklyHypometh 1.00000000 0.98164205 insignificant -0.053636 0.37755036 lowCoverage 1.000000 lowCoverage chr4 54787879 54788879 16643 ENSG00000210505 0.0104229 571 18 0.148786 925 18 0.066885 841 18 0.00078555 630 18 0.019145 673 18 0.108411 1281 18 0.0053467 881 18 0.095238 779 18 0.145479 1062 18 0.0072541 1059 18 0.020351 786 19 0.0097997 574 19 0.004891 724 18 0.001355 520 18 0.087071 843 18 0.000000 653 18 0.0020202 344 10 0.0121482 663 16 0.013274 447 18 0.0561195 769 18 0.04404 317 18 0.0438021 468 15 0.073015 524 18 0.071212 402 19 0.054223 484 18 0.0527627 1127 18 0.0063647 761 18 0.055659 369 17 0.044493 579 19 0.028910 1251 18 0.0018571 1092 18 0.0046877 941 18 0.0027778 638 18 0.050662 449 18 0.055556 948 16 0.00000 288 14 0.053217 702 20 0.0629618 1073 18 0.069233 846 18 0.0725884 701 18 0.0494349 585 18 0.070167 407 15 0.0681556 803 18 0.0111912 0.0063042 0.04965663 0.0012312 0.0063857 0.0115905 0.0076832 0.000000 0.0037398 0.0098510 0.0039002 0.014984 0.0064694 0.00123683 0.008907 0.00000000 0.00373178 0.0072059 0.011481 0.0059752 0.0075194 0.0030082 0.021956 0.0058147 0.0063011 0.00373255 0.0075620 0.014310 0.003688 0.0052807 0.00134969 0.0047730 0.0043949 0.0027738 0.0662610 0.00000 0.020805 0.0041742 0.0162837 0.0192217 0.0027706 0.0092881 0.0219569 16 0.0107155 0.0092659 0.0020261 18 0.0827512 0.058352 0.02439901 0.0620953 0.9964732 insignificant 1 1.00000 insignificant 0.10660543 9.9971e-01 insignificant 1.00000 1.000000 insignificant 0.00065372 0.9610090 insignificant 1 insignificant 0.0106503 0.0126891 -0.0028623 18 0.0653659 0.0518291 0.01353677 3.2750e-01 9.8656e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.7954e-01 9.9933e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0032103 8.4444e-01 insignificant 1.0000000 insignificant 0.0105873 0.0173549 -0.0085009 18 0.0508943 0.067333 -0.0164383 0.416762 8.9451e-07 weaklyHypometh 1 4.4725e-04 weaklyHypometh 0.31860 5.6302e-02 insignificant 1 1.0000e+00 insignificant -0.0251766 0.04635265 weaklyHypometh 1.000000 insignificant 0.0092671 0.0126891 -0.0057228 18 0.060784 0.0518291 0.00895447 6.9395e-01 7.5062e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.2005e-01 9.0483e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0025566 8.5479e-01 insignificant 1.0000000 insignificant 0.0091732 0.0173549 -0.00960738 18 0.045657 0.067333 -0.0216752 0.92646 1.1660e-03 weaklyHypometh 1 3.9807e-01 insignificant 0.95932 9.1698e-02 insignificant 1 1.0000e+00 insignificant -0.0258303 0.00689389 weaklyHypometh 1.000000 insignificant 0.0124633 0.0173549 -0.002504 18 0.0433602 0.067333 -0.0239724 9.7275e-01 1.5785e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9594e-01 5.8382e-01 insignificant 1.00000000 1.00000000 insignificant -0.028387 0.05850398 insignificant 1.000000 insignificant chr4 55101279 55102279 16657 PDGFRA ENSG00000134853 0.8769306 355 9 0.767894 122 8 0.838673 136 9 0.96376528 211 9 0.915825 54 7 0.860565 261 9 0.8520787 93 8 0.891493 93 7 0.871053 62 4 0.8001543 86 7 0.802282 205 9 0.8488095 48 6 0.894603 93 7 NA 0 0 0.899405 78 8 0.575866 46 4 0.8857143 65 7 0.9236091 227 9 0.984917 88 8 0.8427596 184 7 0.84667 40 5 0.9580247 76 6 0.882734 182 9 0.802143 47 4 0.902381 49 6 0.8873077 142 8 0.8943723 77 7 0.866667 38 5 0.901815 85 7 0.820184 168 8 0.9012836 141 9 0.8774224 238 9 0.7794799 111 7 0.803715 117 9 0.786970 184 9 0.86376 56 6 0.838290 65 7 0.7410961 165 9 0.938439 233 9 0.8928249 284 9 0.9282487 263 9 0.952606 291 9 0.8171648 275 9 0.8620221 0.8172062 0.78009817 0.9423503 0.9364264 0.8825027 0.8560707 0.890278 0.8491426 0.8503217 0.8794784 0.881759 0.9001883 NA 0.941283 0.77825464 0.87449556 0.9334295 0.976148 0.8744920 0.9058380 0.9406780 0.876927 0.8068738 0.9252085 0.88432048 0.8646491 0.844633 0.880372 0.9193916 0.86761764 0.8657871 0.7585197 0.7764662 0.8468626 0.88204 0.882077 0.7971436 0.9169886 0.8877012 0.9035865 0.9463892 0.8731520 3 0.8851217 0.8869836 -0.0024909 8 0.8772697 0.876319 0.00095114 0.5296793 0.4007995 insignificant 1 1.00000 insignificant 0.74299740 2.9170e-01 insignificant 1.00000 1.000000 insignificant -0.02071171 0.3793241 insignificant 1 insignificant 0.8851217 0.8180516 0.0649637 8 0.8772697 0.8113259 0.06594381 1.4435e-03 9.9997e-01 weaklyHypermeth 4.1242e-02 1.0000e+00 weaklyHypermeth 8.9583e-03 9.9918e-01 weaklyHypermeth 3.4663e-01 1.0000e+00 insignificant 0.0554870 5.2928e-02 insignificant 1.0000000 insignificant 0.8851217 0.9309064 -0.0324458 8 0.8772697 0.916923 -0.0396533 0.989786 8.1429e-02 insignificant 1 1.0000e+00 insignificant 0.78277 2.8488e-01 insignificant 1 1.0000e+00 insignificant -0.0481517 0.15548710 insignificant 1.000000 insignificant 0.8869836 0.8180516 0.0672576 8 0.876319 0.8113259 0.06499267 9.0189e-04 9.9984e-01 weaklyHypermeth 2.6526e-02 1.0000e+00 weaklyHypermeth 9.1215e-03 9.9995e-01 weaklyHypermeth 2.7641e-01 1.0000e+00 insignificant 0.0761987 5.6495e-03 weaklyHypermeth 0.3530944 insignificant 0.8869836 0.9309064 -0.02879243 8 0.876319 0.916923 -0.0406045 0.92495 4.2389e-02 weaklyHypometh 1 1.0000e+00 insignificant 0.86424 5.9047e-01 insignificant 1 1.0000e+00 insignificant -0.0274399 0.34909562 insignificant 1.000000 insignificant 0.8180516 0.9309064 -0.094370 8 0.8113259 0.916923 -0.1055972 9.9999e-01 3.2740e-06 weaklyHypometh 1.0000e+00 2.3385e-04 weaklyHypometh 9.9988e-01 4.1139e-03 weaklyHypometh 1.00000000 0.18699503 insignificant -0.103639 0.00937383 weaklyHypometh 0.468691 insignificant chr4 55315879 55316879 16671 KIT ENSG00000157404 0.8121538 307 7 0.738223 218 7 0.666560 159 7 0.80073854 123 7 0.800822 578 7 0.764502 360 7 0.8100830 556 7 0.863842 482 7 0.770390 444 7 0.8320936 419 7 0.850555 703 7 0.7781784 381 7 0.823959 628 7 0.900000 10 2 0.807065 522 7 0.816596 317 7 0.7002994 367 6 0.7859296 152 7 0.833868 648 7 0.8172423 319 7 0.87136 109 7 0.9079365 82 5 0.830088 194 7 0.761148 105 6 0.939484 77 5 0.8813524 226 7 0.7840747 139 7 0.823980 85 7 0.825411 778 7 0.861265 262 7 0.7761732 167 7 0.8326098 381 7 0.7607172 216 7 0.733144 520 7 0.828910 158 7 0.87542 77 6 0.750992 158 7 0.8390023 258 7 0.869819 240 7 0.8324520 215 7 0.8867462 147 7 0.868429 214 7 0.7987395 163 7 0.7975153 0.7055082 0.67313271 0.8122793 0.7954478 0.7403892 0.7910926 0.819441 0.7413794 0.8292162 0.8094710 0.775264 0.8075393 0.80165428 0.798308 0.76769726 0.63944186 0.7673828 0.831688 0.7880957 0.8230925 0.8840206 0.809720 0.7613503 0.9125859 0.87422078 0.7614346 0.798515 0.808906 0.8426681 0.74556419 0.8073581 0.7674015 0.7288438 0.8076516 0.86088 0.737710 0.8007717 0.8517944 0.7938851 0.8547212 0.8414513 0.7715787 6 0.7740803 0.8199616 -0.0358147 7 0.7999983 0.836335 -0.03633684 0.9999745 0.0010744 weaklyHypometh 1 0.39860 insignificant 0.99996399 3.2714e-04 weaklyHypometh 1.00000 0.163571 insignificant -0.04258547 0.0401085 weaklyHypometh 1 insignificant 0.7740803 0.7757751 0.0096897 7 0.7999983 0.7909962 0.00900215 3.5116e-01 5.9936e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.2868e-01 3.3619e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0006240 9.8166e-01 insignificant 1.0000000 insignificant 0.7740803 0.8426966 -0.0461598 7 0.7999983 0.851443 -0.0514447 0.999411 7.9676e-04 weaklyHypometh 1 1.5935e-01 insignificant 0.99984 1.8911e-03 weaklyHypometh 1 3.7822e-01 insignificant -0.0525820 0.02592883 weaklyHypometh 1.000000 insignificant 0.8199616 0.7757751 0.0463723 7 0.836335 0.7909962 0.04533899 1.9821e-03 9.8717e-01 weaklyHypermeth 5.5059e-02 1.0000e+00 weaklyHypermeth 1.0975e-02 9.5699e-01 weaklyHypermeth 3.1160e-01 1.0000e+00 insignificant 0.0432095 1.5630e-01 insignificant 1.0000000 insignificant 0.8199616 0.8426966 -0.01227483 7 0.836335 0.851443 -0.0151078 0.79653 2.3587e-01 insignificant 1 1.0000e+00 insignificant 0.79053 5.0636e-01 insignificant 1 1.0000e+00 insignificant -0.0099965 0.66013322 insignificant 1.000000 insignificant 0.7757751 0.8426966 -0.057532 7 0.7909962 0.851443 -0.0604468 9.5142e-01 4.3950e-03 weaklyHypometh 1.0000e+00 1.1904e-01 insignificant 9.3397e-01 2.2074e-02 weaklyHypometh 1.00000000 0.64922132 insignificant -0.053206 0.09463314 insignificant 1.000000 insignificant chr4 56630979 56631979 16709 CEP135 ENSG00000174799 0.7211972 846 13 0.604300 517 13 0.672089 588 16 0.73264757 655 13 0.723389 354 16 0.763176 563 13 0.6643863 254 15 0.743270 476 13 0.660150 451 13 0.7107847 491 13 0.726016 657 16 0.6779797 315 11 0.714834 481 13 0.816759 269 8 0.736054 469 13 0.670954 172 7 0.6887830 1028 10 0.7551852 571 13 0.702259 583 13 0.6383653 484 13 0.79864 169 13 0.6774725 93 9 0.721943 493 13 0.640235 216 14 0.809444 130 13 0.6982422 831 13 0.6878910 313 15 0.824253 181 7 0.745149 384 13 0.765583 787 13 0.7726334 691 16 0.7425605 610 13 0.7179745 389 13 0.668273 248 13 0.702292 588 13 0.74595 121 10 0.670705 410 14 0.6425988 839 13 0.766910 790 14 0.7838848 703 14 0.7677970 633 13 0.833700 671 13 0.7430715 717 13 0.7512944 0.6187278 0.66953573 0.7393103 0.7274651 0.7346212 0.5936859 0.706919 0.6808896 0.6918897 0.6821784 0.655512 0.6599650 0.70264765 0.712633 0.57327586 0.71363996 0.7594611 0.689554 0.6359574 0.7633018 0.6994295 0.787917 0.6530601 0.8241352 0.73728814 0.7349185 0.734151 0.753342 0.7558365 0.71321983 0.7287695 0.6517308 0.6592831 0.7011591 0.79856 0.708626 0.6834530 0.7384088 0.7624156 0.7655685 0.7848191 0.7523637 9 0.7007042 0.7337556 -0.0296783 13 0.6976425 0.709509 -0.01186630 0.9486032 0.0116258 weaklyHypometh 1 1.00000 insignificant 0.81556845 2.1196e-02 weaklyHypometh 1.00000 1.000000 insignificant -0.03420824 0.0972941 insignificant 1 insignificant 0.7008121 0.6863198 0.0158641 13 0.7174068 0.6364328 0.08097403 1.2359e-02 7.8174e-01 weaklyHypermeth 2.4719e-01 1.0000e+00 insignificant 1.0854e-01 6.0442e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0148306 4.4844e-01 insignificant 1.0000000 insignificant 0.7008221 0.7453045 -0.0494871 13 0.7200773 0.780145 -0.0600674 0.999997 1.1152e-03 weaklyHypometh 1 1.8586e-01 insignificant 1.00000 2.0714e-04 weaklyHypometh 1 5.1784e-02 weaklyHypometh -0.0729437 0.00377791 weaklyHypometh 0.408499 insignificant 0.7337423 0.6863198 0.0446331 13 0.697126 0.6364328 0.06069362 7.5313e-05 9.9999e-01 weaklyHypermeth 3.0125e-03 1.0000e+00 weaklyHypermeth 3.4258e-02 9.9980e-01 weaklyHypermeth 7.9669e-01 1.0000e+00 insignificant 0.0490389 4.6903e-02 weaklyHypermeth 1.0000000 insignificant 0.7339881 0.7453045 -0.01956520 13 0.716273 0.780145 -0.0638714 0.99218 2.4313e-02 weaklyHypometh 1 1.0000e+00 insignificant 0.99600 7.7842e-02 insignificant 1 1.0000e+00 insignificant -0.0387355 0.10748304 insignificant 1.000000 insignificant 0.6861989 0.7453045 -0.066904 13 0.6172977 0.780145 -0.1628471 9.9998e-01 1.1167e-07 weaklyHypometh 1.0000e+00 1.2407e-05 weaklyHypometh 9.9986e-01 4.7991e-05 weaklyHypometh 1.00000000 0.00685581 weaklyHypometh -0.087774 0.00288613 weaklyHypometh 0.251227 insignificant chr4 57724179 57725179 16741 IGFBP7 ENSG00000163453 0.0035019 324 10 0.000000 351 11 0.009893 305 11 0.00093458 314 5 0.000000 125 6 0.016667 374 10 0.0238095 177 6 0.017105 132 6 0.011111 243 6 0.0258838 179 6 0.043086 188 6 0.0233990 127 6 0.008642 204 6 0.000000 124 5 0.000000 248 6 0.008772 132 6 0.0075758 108 6 0.0008772 355 9 0.000000 120 6 0.0060807 361 9 0.11503 72 6 0.0043478 195 5 0.038835 251 11 0.036963 123 6 0.000000 105 5 0.0039526 393 11 0.0357143 160 6 0.000000 171 6 0.000000 112 6 0.000000 380 11 0.0028409 333 11 0.0101010 360 10 0.0000000 277 11 0.013889 84 6 0.000000 272 7 0.00000 29 3 0.000000 118 6 0.0026738 245 11 0.051825 534 9 0.0055964 376 9 0.0017391 339 5 0.022727 304 5 0.0015625 407 5 0.0068529 0.0000000 0.00087362 0.0029842 0.0000000 0.0029703 0.0021216 0.012064 0.0009901 0.0053818 0.0266206 0.009334 0.0063623 0.00070728 0.000000 0.00078166 0.00067507 0.0027792 0.000000 0.0117022 0.0319853 0.0079627 0.017732 0.0116492 0.0000000 0.00064572 0.0031825 0.000000 0.000000 0.0000000 0.00046411 0.0016502 0.0000000 0.0094884 0.0018977 0.00000 0.000000 0.0093186 0.0056141 0.0091042 0.0055532 0.0037129 0.0049892 5 0.0075707 0.0082863 -0.0006829 9 0.0077933 0.027361 -0.01956762 0.8902971 0.8948929 insignificant 1 1.00000 insignificant 0.91115622 9.6545e-01 insignificant 1.00000 1.000000 insignificant -0.01028161 0.3248620 insignificant 1 insignificant 0.0075707 0.0019512 0.0045252 9 0.0077933 0.0019139 0.00587944 4.7894e-01 9.9675e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.7599e-01 9.9983e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0076065 3.9986e-02 weaklyHypermeth 1.0000000 insignificant 0.0075707 0.0066327 -0.0019776 5 0.0077933 0.040906 -0.0331130 0.986983 8.6851e-01 insignificant 1 1.0000e+00 insignificant 0.97844 6.1701e-01 insignificant 1 1.0000e+00 insignificant -0.0063231 0.55540273 insignificant 1.000000 insignificant 0.0082863 0.0019512 0.0063674 11 0.027361 0.0019139 0.02544706 6.1807e-01 9.9218e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.3699e-01 9.9890e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0178881 9.7305e-02 insignificant 1.0000000 insignificant 0.0082863 0.0066327 -0.00271398 5 0.027361 0.040906 -0.0135454 0.99104 4.2053e-01 insignificant 1 1.0000e+00 insignificant 0.97981 4.6225e-01 insignificant 1 1.0000e+00 insignificant 0.0039585 0.77684109 insignificant 1.000000 insignificant 0.0019512 0.0066327 -0.006588 5 0.0019139 0.040906 -0.0389925 9.9910e-01 2.0903e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9972e-01 3.2377e-01 insignificant 1.00000000 1.00000000 insignificant -0.013930 0.22422143 insignificant 1.000000 insignificant chr4 67951579 67952579 16814 MIR1269 ENSG00000221563 0.8134848 242 7 0.725952 88 7 0.807893 89 7 0.76957923 127 7 0.749603 56 7 0.795385 243 7 0.7929825 127 7 0.801697 83 6 0.767957 69 6 0.6993721 66 6 0.758159 151 7 0.6729283 63 7 0.801814 70 7 NA 0 0 0.810658 87 7 0.720066 74 7 0.7524404 92 7 0.8245455 164 7 0.823569 107 7 0.8384317 231 7 0.83766 39 3 0.8511905 36 3 0.810034 126 7 0.911735 36 3 0.928571 29 3 0.7662698 64 7 0.8176020 52 3 0.923810 31 4 0.893197 62 5 0.719388 43 6 0.8340136 46 7 0.8247768 340 7 0.7778876 91 6 0.714063 89 7 0.796349 133 7 0.90191 74 7 0.617347 33 3 0.7831502 78 7 0.867016 188 7 0.8261492 207 7 0.9046137 169 7 0.831748 209 7 0.8686880 260 7 0.8213742 0.7366359 0.79397525 0.7156495 0.7770347 0.7872506 0.7765225 0.782333 0.7443457 0.6998087 0.7534155 0.725536 0.8179355 NA 0.794637 0.72821048 0.77347472 0.8415808 0.793292 0.8191885 0.8262884 0.8095364 0.877161 0.8918790 0.9681529 0.76273885 0.8746019 0.881104 0.832484 0.7452229 0.85244161 0.8106802 0.7730205 0.6761846 0.7598726 0.92662 0.687898 0.8293320 0.8479371 0.8239676 0.9107397 0.8522154 0.8647807 3 0.7873486 0.8307522 -0.0457137 7 0.7863536 0.826315 -0.03996132 0.9960559 0.0023821 weaklyHypometh 1 0.59553 insignificant 0.99999788 1.0098e-05 weaklyHypometh 1.00000 0.010098 weaklyHypometh -0.06810763 0.0047171 lowCoverage 1 lowCoverage 0.7873486 0.7771084 0.0098312 7 0.7863536 0.7764510 0.00990260 3.4479e-01 7.6660e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.4766e-01 6.7224e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0099621 8.1185e-01 insignificant 1.0000000 insignificant 0.7873486 0.8596321 -0.0728336 7 0.7863536 0.856840 -0.0704869 0.999976 2.9919e-04 weaklyHypometh 1 9.9729e-02 weaklyHypometh 0.99999 3.6505e-05 weaklyHypometh 1 1.8253e-02 weaklyHypometh -0.0845633 0.00101951 weaklyHypometh 0.145644 insignificant 0.8307522 0.7771084 0.0548106 7 0.826315 0.7764510 0.04986392 5.8642e-03 9.7929e-01 weaklyHypermeth 1.3638e-01 1.0000e+00 insignificant 4.6331e-03 9.9868e-01 weaklyHypermeth 1.8618e-01 1.0000e+00 insignificant 0.0780697 1.0827e-01 lowCoverage 1.0000000 lowCoverage 0.8307522 0.8596321 -0.02843211 7 0.826315 0.856840 -0.0305255 0.95902 3.1452e-01 insignificant 1 1.0000e+00 insignificant 0.34244 9.4846e-01 insignificant 1 1.0000e+00 insignificant -0.0164557 0.49039888 lowCoverage 1.000000 lowCoverage 0.7771084 0.8596321 -0.083903 7 0.7764510 0.856840 -0.0803895 9.9945e-01 9.7101e-04 weaklyHypometh 1.0000e+00 3.5963e-02 weaklyHypometh 9.9160e-01 3.4545e-03 weaklyHypometh 1.00000000 0.17272299 insignificant -0.094525 0.05905120 insignificant 1.000000 insignificant chr4 71976979 71977979 16856 ENSG00000207007 0.7714685 655 14 0.681682 352 13 0.804076 267 11 0.82284938 531 14 0.694559 220 14 0.773531 561 13 0.7099125 197 12 0.733528 322 12 0.698776 140 13 0.7997484 211 12 0.697518 415 11 0.7141846 92 7 0.758150 350 13 0.812649 236 14 0.750343 289 13 0.492936 89 8 0.7130519 441 7 0.6864639 688 15 0.831287 374 11 0.8589428 428 11 0.71663 86 9 0.7949405 92 4 0.831692 329 12 0.745359 137 10 0.785261 314 11 0.7562266 387 14 0.6729160 219 11 0.740420 60 5 0.753216 428 14 0.675969 339 11 0.7233545 365 11 0.6626774 414 11 0.7238909 294 14 0.688689 362 14 0.742109 500 14 0.67143 42 5 0.638331 259 14 0.6332849 554 11 0.725993 362 14 0.7457189 473 14 0.8059415 453 14 0.830162 532 12 0.7967092 388 14 0.8103861 0.7491166 0.77786876 0.8136632 0.6609385 0.8040242 0.7014342 0.807905 0.7573565 0.8084673 0.7543598 0.756100 0.7623642 0.82824749 0.784424 0.51966125 0.76880165 0.7735200 0.846653 0.8151840 0.7154082 0.8199549 0.786438 0.7624484 0.7553416 0.82478159 0.6847198 0.712610 0.754777 0.7250593 0.80892027 0.7826444 0.6398926 0.7277892 0.7718003 0.57226 0.633798 0.6987993 0.7545111 0.7897255 0.8155187 0.8712456 0.8236643 8 0.7957993 0.7977918 0.0094717 12 0.7330243 0.751350 -0.01832561 0.7511323 0.5227877 insignificant 1 1.00000 insignificant 0.87113702 7.8148e-01 insignificant 1.00000 1.000000 insignificant 0.00206087 0.9297946 insignificant 1 insignificant 0.7963424 0.6653406 0.1216653 12 0.8015085 0.7043181 0.09719032 1.5299e-05 9.9834e-01 weaklyHypermeth 7.6494e-04 1.0000e+00 weaklyHypermeth 6.8762e-03 9.9327e-01 weaklyHypermeth 3.2744e-01 1.0000e+00 insignificant 0.0573274 3.8469e-02 weaklyHypermeth 1.0000000 insignificant 0.7958706 0.8269928 -0.0211867 14 0.7688241 0.787233 -0.0184093 0.997068 2.5052e-01 insignificant 1 1.0000e+00 insignificant 0.95513 1.9680e-01 insignificant 1 1.0000e+00 insignificant -0.0406220 0.14948975 insignificant 1.000000 insignificant 0.7986067 0.6646736 0.1124019 12 0.782937 0.6673579 0.11557945 5.8847e-07 9.6206e-01 weaklyHypermeth 4.5267e-05 1.0000e+00 weaklyHypermeth 6.0983e-04 9.2484e-01 weaklyHypermeth 3.9129e-02 1.0000e+00 weaklyHypermeth 0.0552665 3.6652e-02 weaklyHypermeth 1.0000000 insignificant 0.7981593 0.8272109 -0.03046655 12 0.748467 0.792198 -0.0437313 0.78813 4.0564e-02 weaklyHypometh 1 1.0000e+00 insignificant 0.83801 6.6609e-02 insignificant 1 1.0000e+00 insignificant -0.0426828 0.11550645 insignificant 1.000000 insignificant 0.6655052 0.8268359 -0.163372 12 0.7298579 0.773935 -0.0440776 9.9558e-01 4.6956e-04 weaklyHypometh 1.0000e+00 2.0374e-02 weaklyHypometh 9.8056e-01 2.0365e-03 weaklyHypometh 1.00000000 0.12728173 insignificant -0.097949 0.00529203 weaklyHypometh 0.330752 insignificant chr4 72010579 72011579 16859 MOBKL1A ENSG00000173542 0.8078022 272 9 0.746572 220 9 0.657848 146 9 0.78259781 197 9 0.775706 149 8 0.706024 320 9 0.7749544 156 8 0.682189 180 9 0.672397 130 9 0.6441003 244 8 0.685027 340 9 0.7297049 114 4 0.760059 213 9 0.693532 84 5 0.828129 167 9 0.586492 158 8 0.7343478 132 4 0.7633936 343 10 0.739228 185 9 0.7583014 260 9 0.79239 175 7 0.7322222 79 8 0.741102 189 9 0.841676 202 9 0.832348 125 9 0.7434634 238 9 0.6797571 122 9 0.736310 104 4 0.787133 204 7 0.648596 219 9 0.7058578 221 10 0.8376289 335 9 0.6258401 216 9 0.614938 148 9 0.623902 246 9 0.78571 49 3 0.691312 176 10 0.7512064 220 9 0.723932 247 10 0.8181641 295 9 0.8159295 277 9 0.704641 214 6 0.7633659 238 9 0.8134134 0.7162702 0.73825666 0.8222707 0.8267178 0.8075253 0.7947683 0.797394 0.7110238 0.7783148 0.8036175 0.782254 0.8685765 0.71000631 0.844308 0.62531923 0.72213400 0.8286602 0.776715 0.7840667 0.8173316 0.8715278 0.770400 0.8238110 0.8659864 0.72637360 0.7744718 0.774384 0.817992 0.7885169 0.79886596 0.8517616 0.6711572 0.7584680 0.7930972 0.85276 0.767220 0.7927179 0.8042472 0.8383722 0.8275058 0.7446110 0.7935380 4 0.7750623 0.8002711 -0.0180293 9 0.7354640 0.738398 -0.00293406 0.9234589 0.3037451 insignificant 1 1.00000 insignificant 0.95692297 2.6937e-01 insignificant 1.00000 1.000000 insignificant -0.03012019 0.1946839 insignificant 1 insignificant 0.7752809 0.7545024 0.0248992 9 0.7477789 0.6713424 0.07643648 5.9405e-02 9.1616e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.6642e-01 7.8038e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0442681 2.1684e-01 insignificant 1.0000000 insignificant 0.7752809 0.7797010 -0.0236744 9 0.7477789 0.791909 -0.0441305 0.994839 5.8738e-02 insignificant 1 1.0000e+00 insignificant 0.99262 3.2390e-01 insignificant 1 1.0000e+00 insignificant -0.0387863 0.19105540 insignificant 1.000000 insignificant 0.8003622 0.7545024 0.0433984 9 0.737343 0.6713424 0.06600091 3.2601e-02 8.9681e-01 weaklyHypermeth 5.9465e-01 1.0000e+00 insignificant 1.0560e-01 9.2633e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0743883 6.2355e-02 insignificant 1.0000000 insignificant 0.8003622 0.7797010 -0.00426079 9 0.737343 0.791909 -0.0545661 0.94018 1.9544e-01 insignificant 1 1.0000e+00 insignificant 0.81795 5.3629e-01 insignificant 1 1.0000e+00 insignificant -0.0086661 0.77494049 insignificant 1.000000 insignificant 0.7545024 0.7797010 -0.046297 9 0.6713424 0.791909 -0.1205670 9.9119e-01 2.9717e-02 weaklyHypometh 1.0000e+00 6.0648e-01 insignificant 9.3598e-01 1.9890e-01 insignificant 1.00000000 1.00000000 insignificant -0.083054 0.05595159 insignificant 1.000000 insignificant chr4 75006479 75007479 16940 ENSG00000209209 0.7921234 582 19 0.681328 383 19 0.761818 208 16 0.78338802 339 17 0.718569 257 19 0.758917 733 19 0.6469047 215 19 0.799956 335 19 0.628329 194 16 0.7837715 234 19 0.804019 657 19 0.7701447 138 13 0.859445 373 17 0.825198 58 6 0.756662 278 19 0.610553 112 8 0.7618586 128 13 0.7606168 474 17 0.719032 384 19 0.7463121 755 19 0.86900 123 13 0.7452615 199 16 0.753182 390 19 0.793438 181 13 0.779113 100 12 0.7889406 478 19 0.8245903 265 14 0.766667 92 7 0.736659 227 13 0.845521 491 19 0.7791632 425 19 0.7644282 747 19 0.7338283 332 18 0.733010 299 19 0.774768 307 19 0.73065 106 8 0.633493 203 16 0.6852337 552 19 0.817927 552 17 0.8123484 520 19 0.7855590 495 17 0.781670 408 17 0.8021146 480 19 0.8337382 0.7129842 0.80657287 0.7938836 0.7356747 0.7619223 0.7252221 0.829556 0.6634219 0.8089649 0.8314811 0.817299 0.8858946 0.80843444 0.813833 0.72264402 0.80999916 0.7798712 0.779302 0.7803759 0.8244975 0.8166198 0.805327 0.8257064 0.8058494 0.81404748 0.8408447 0.764689 0.757244 0.8303581 0.79913387 0.7961722 0.7454743 0.7633676 0.8143030 0.73651 0.655237 0.7629781 0.8415003 0.8724716 0.8302891 0.8084685 0.8152252 6 0.7792569 0.8117267 -0.0208325 19 0.7720520 0.796124 -0.02407189 0.9801587 0.0554398 insignificant 1 1.00000 insignificant 0.99596495 1.6196e-02 weaklyHypometh 1.00000 1.000000 insignificant -0.03871637 0.0461035 weaklyHypometh 1 insignificant 0.7792892 0.7520845 0.0359363 19 0.7824133 0.7094697 0.07294353 3.5729e-03 9.9965e-01 weaklyHypermeth 8.6584e-02 1.0000e+00 weaklyHypermeth 5.6597e-02 9.9891e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0332835 2.0538e-01 insignificant 1.0000000 insignificant 0.7792892 0.8008147 -0.0420671 19 0.7824133 0.791639 -0.0092261 0.994201 4.7893e-03 weaklyHypometh 1 3.9911e-01 insignificant 0.99980 1.8555e-04 weaklyHypometh 1 5.1784e-02 weaklyHypometh -0.0514764 0.00408499 weaklyHypometh 0.408499 insignificant 0.8117267 0.7525028 0.0557055 19 0.796124 0.7432540 0.05286988 1.7972e-05 1.0000e+00 weaklyHypermeth 8.9862e-04 1.0000e+00 weaklyHypermeth 6.6519e-04 1.0000e+00 weaklyHypermeth 3.9129e-02 1.0000e+00 weaklyHypermeth 0.0719999 1.3432e-02 weaklyHypermeth 0.7462457 insignificant 0.8117267 0.8007335 -0.01743200 19 0.796124 0.781717 0.0144065 0.67626 3.8648e-03 weaklyHypometh 1 4.7426e-01 insignificant 0.90236 3.9450e-02 weaklyHypometh 1 1.0000e+00 insignificant -0.0127601 0.36686291 insignificant 1.000000 insignificant 0.7520845 0.8008147 -0.074176 19 0.7094697 0.791639 -0.0821696 9.9960e-01 6.0450e-07 weaklyHypometh 1.0000e+00 5.4955e-05 weaklyHypometh 1.0000e+00 1.0428e-05 weaklyHypometh 1.00000000 0.00173800 weaklyHypometh -0.084760 0.00669210 weaklyHypometh 0.371784 insignificant chr4 77773595 77774595 17022 ENSG00000207307 0.85015 315 7 0.85013 136 5 0.80449 155 7 0.84021 186 7 0.69979 74 7 0.80109 285 7 0.93306 125 7 0.85143 118 6 0.88225 105 6 0.86585 105 6 0.89791 216 7 0.78637 100 7 0.91745 122 6 0.62500 16 2 0.86360 142 7 0.80630 100 6 0.71263 86 6 0.92578 216 7 0.85126 147 7 0.87066 237 7 0.93083 56 5 0.84214 69 4 0.89866 153 7 0.76791 120 7 0.84473 98 7 0.81914 188 7 0.64462 79 6 0.61550 78 5 0.85923 127 6 0.75107 186 7 0.66577 152 7 0.86956 327 10 0.934965 111 5 0.82048 114 7 0.71256 147 7 0.86715 82 6 0.837562 117 7 0.80753 163 7 0.89966 311 7 0.95057 297 7 0.92987 220 7 0.87872 216 7 0.91225 305 7 0.88423 0.88163 0.79667 0.88678 0.79733 0.81453 0.91404 0.90407 0.84599 0.91269 0.89295 0.84762 0.92597 0.81689 0.87099 0.91388 0.94594 0.91928 0.90560 0.88399 0.91655 0.89706 0.90134 0.87463 0.89920 0.83233 0.73391 0.71010 0.91608 0.85404 0.90561 0.88432 0.903761 0.90303 0.73765 0.90767 0.83455 0.87674 0.92776 0.96206 0.95512 0.91916 0.94400 4 0.86202 0.83895 0.0224703 7 0.84174 0.76948 0.0722602 0.12544 0.820243 insignificant 1 1 insignificant 0.24640 0.846766 insignificant 1 1 insignificant 0.0393392 0.27145 insignificant 1 insignificant 0.86281 0.8256131 0.02716003 7 0.85453 0.86433 -0.0097977 2.4429e-01 0.60010 insignificant 1.0000e+00 1 insignificant 5.3451e-01 0.51058 insignificant 1.0000e+00 1 insignificant 0.0017299 9.6135e-01 insignificant 1.0000e+00 insignificant 0.86240 0.92809 -0.067369 7 0.84089 0.91414 -0.073252 0.999999 6.5747e-05 weaklyHypometh 1 0.03287342 weaklyHypometh 0.999999 0.00014387 weaklyHypometh 1 0.14387 insignificant -8.2446e-02 0.00104754 weaklyHypometh 0.26591 insignificant 0.84029 0.8256131 0.0042137 7 0.84004 0.86433 -0.0242877 6.8982e-01 0.49276 insignificant 1.0000e+00 1 insignificant 8.9542e-01 0.57365 insignificant 1.0000e+00 1 insignificant -0.037609 3.8942e-01 insignificant 1.0000e+00 insignificant 0.83785 0.92809 -0.0913189 7 0.80074 0.91414 -0.1134014 1.000000 1.3249e-05 weaklyHypometh 1 0.0066245 weaklyHypometh 0.999989 0.00013090 weaklyHypometh 1 0.13090 insignificant -0.12178482 0.0021173 weaklyHypometh 0.52932 insignificant 0.8241758 0.92809 -0.100017 7 0.80619 0.91414 -0.107956 0.99972 2.1305e-05 weaklyHypometh 1 1.5218e-03 weaklyHypometh 0.99489 4.7654e-03 weaklyHypometh 1 0.31769199 insignificant -0.084176 0.0371971 weaklyHypometh 1.00000 insignificant chr4 89710395 89711395 17296 PIGY ENSG00000145337 0.79136 101 5 0.70079 93 4 0.93333 15 0 0.72455 76 4 0.67286 48 5 0.75692 68 4 0.74477 47 3 0.79167 67 5 0.80000 23 2 0.78667 20 2 0.75446 84 4 0.91667 20 1 0.79500 60 5 0.58571 29 3 0.75083 41 2 0.57071 45 3 0.87500 17 1 0.86682 114 4 0.93056 36 4 0.82573 58 4 0.66667 6 0 0.83333 6 0 0.78923 75 5 0.70000 27 4 0.86563 56 4 0.73571 38 2 0.75000 14 2 0.88889 6 0 0.72132 69 5 0.85824 50 4 0.78369 37 4 0.81880 48 4 0.700663 75 5 0.63235 52 4 0.70702 58 4 1.00000 1 0 0.661538 31 2 0.76044 45 4 0.84795 68 5 0.81398 96 5 0.89811 116 4 0.93697 73 3 0.78712 73 4 0.78981 0.62430 1.00000 0.77906 0.86485 0.72557 0.70747 0.79412 0.92647 0.83529 0.79285 0.95966 0.93235 0.69244 0.81569 0.62742 0.80245 0.82086 0.90196 0.85759 0.85106 0.76283 0.78054 0.82353 0.78864 0.80672 0.95564 0.94910 0.81183 0.88062 0.77439 0.79940 0.698505 0.75642 0.77804 0.80638 0.81114 0.78927 0.84863 0.82271 0.91614 0.91052 0.85472 0 0.75989 0.79398 -0.0341599 4 0.75273 0.78004 -0.0273091 0.93770 0.125449 lowCoverage 1 1 lowCoverage 0.78479 0.220031 lowCoverage 1 1 lowCoverage -0.0055715 0.85534 lowCoverage 1 lowCoverage 0.75989 0.7137405 0.03737858 4 0.75273 0.71301 0.0397116 1.7844e-01 0.95911 lowCoverage 1.0000e+00 1 lowCoverage 1.0272e-01 0.97460 lowCoverage 1.0000e+00 1 lowCoverage 0.0350520 5.6969e-01 lowCoverage 1.0000e+00 lowCoverage 0.75989 0.84507 -0.076398 5 0.75273 0.83342 -0.080696 0.999146 1.4318e-02 weaklyHypometh 1 1.00000000 insignificant 0.998002 0.01560342 weaklyHypometh 1 1.00000 insignificant -7.8106e-02 0.05074511 lowCoverage 1.00000 lowCoverage 0.79398 0.7137405 0.0737965 4 0.78004 0.71301 0.0670207 1.4798e-03 0.99131 lowCoverage 6.1656e-02 1 lowCoverage 5.2065e-03 0.99184 lowCoverage 2.6033e-01 1 lowCoverage 0.040623 5.0794e-01 lowCoverage 1.0000e+00 lowCoverage 0.79398 0.84507 -0.0411105 4 0.78004 0.83342 -0.0533872 0.967177 1.1859e-01 lowCoverage 1 1.0000000 lowCoverage 0.927661 0.23358629 lowCoverage 1 1.00000 lowCoverage -0.07253430 0.0631724 lowCoverage 1.00000 lowCoverage 0.7137405 0.84507 -0.110388 4 0.71301 0.83342 -0.120408 0.99997 9.3552e-04 lowCoverage 1 4.4549e-02 lowCoverage 0.99998 3.6858e-03 lowCoverage 1 0.27460666 lowCoverage -0.113158 0.1031733 lowCoverage 1.00000 lowCoverage chr4 90262095 90263095 17316 TIGD2 ENSG00000180346 0.73828 96 8 0.55076 56 8 0.79444 37 5 0.80186 73 8 0.58390 64 4 0.75490 70 6 0.67831 86 9 0.75321 73 5 0.66667 22 1 0.83754 57 3 0.70065 124 8 0.72222 39 4 0.83176 72 4 0.79327 78 8 0.89506 52 4 0.67576 58 5 0.86111 30 3 0.63492 64 4 1.00000 7 0 0.62500 28 1 0.70833 18 0 0.87500 15 0 0.67653 86 5 0.59921 44 5 0.76339 68 5 0.67746 82 5 0.59524 33 5 0.68750 16 0 0.81313 68 8 0.48000 80 5 0.73187 60 5 0.70076 61 5 0.759012 84 8 0.56424 60 5 0.64762 101 5 1.00000 4 0 0.800595 32 1 0.65764 59 8 0.79894 90 8 0.65168 80 8 0.76254 78 5 0.73111 87 4 0.85033 87 5 0.68270 0.57975 0.72463 0.72767 0.60490 0.74074 0.65719 0.75507 0.64360 0.87528 0.69742 0.73134 0.83276 0.82296 0.90216 0.60018 0.77026 0.61644 0.95145 0.76119 0.79657 0.85075 0.58331 0.59115 0.81237 0.67494 0.76439 0.62687 0.77001 0.56418 0.76068 0.69245 0.726957 0.52073 0.65089 NA 0.79153 0.62554 0.80952 0.59565 0.76799 0.73091 0.81740 0 0.74536 0.69572 0.0306825 5 0.71595 0.69396 0.0219884 0.20371 0.955927 insignificant 1 1 insignificant 0.16340 0.887759 insignificant 1 1 insignificant 0.0526133 0.18844 lowCoverage 1 lowCoverage 0.74578 0.6676471 0.05642772 5 0.73995 0.67909 0.0608583 3.7974e-02 0.93766 weaklyHypermeth 9.0414e-01 1 insignificant 2.5486e-02 0.98391 weaklyHypermeth 7.4960e-01 1 insignificant 0.0067975 9.2263e-01 lowCoverage 1.0000e+00 lowCoverage 0.74536 0.80569 -0.046847 8 0.71595 0.80237 -0.086417 0.974256 8.3875e-02 insignificant 1 1.00000000 insignificant 0.942342 0.40485813 insignificant 1 1.00000 insignificant -1.3939e-02 0.74492287 lowCoverage 1.00000 lowCoverage 0.69586 0.6676471 0.0300870 5 0.69700 0.67909 0.0179082 4.2610e-01 0.88492 insignificant 1.0000e+00 1 insignificant 3.8997e-01 0.93396 insignificant 1.0000e+00 1 insignificant -0.045816 5.2961e-01 lowCoverage 1.0000e+00 lowCoverage 0.69572 0.80569 -0.0651297 5 0.69396 0.80237 -0.1084056 0.996617 2.8909e-02 weaklyHypometh 1 1.0000000 insignificant 0.992742 0.21938464 insignificant 1 1.00000 insignificant -0.06655184 0.1669669 lowCoverage 1.00000 lowCoverage 0.6676471 0.80523 -0.095525 5 0.67909 0.78041 -0.101322 0.98370 2.4383e-03 weaklyHypometh 1 9.0306e-02 weaklyHypometh 0.99223 9.1994e-03 weaklyHypometh 1 0.43097184 insignificant -0.020736 0.7781489 lowCoverage 1.00000 lowCoverage chr4 90631395 90632395 17328 GPRIN3 ENSG00000185477 0.79090 351 6 0.81361 348 6 0.77687 190 6 0.82442 370 6 0.83965 109 6 0.80384 491 6 0.71130 122 6 0.58810 262 6 0.79439 185 6 0.72665 214 6 0.82721 262 6 0.81111 74 7 0.76473 281 6 0.77603 112 6 0.79336 190 6 0.84127 45 4 0.72222 15 1 0.82388 398 6 0.81500 320 6 0.80425 418 6 0.86731 108 6 0.90256 159 6 0.72224 290 6 0.82590 150 6 0.69140 112 6 0.82941 350 6 0.79106 236 6 0.56303 82 6 0.84141 271 6 0.88618 448 6 0.84298 521 6 0.85773 464 6 0.714682 299 6 0.64395 205 6 0.65397 168 6 0.68348 58 4 0.721959 196 6 0.78622 416 6 0.75569 519 6 0.89793 422 6 0.83499 370 6 0.85623 306 6 0.84705 380 6 0.82968 0.84509 0.81084 0.86410 0.87282 0.81512 0.76292 0.82853 0.77187 0.85203 0.83912 0.82161 0.88872 0.87688 0.82940 0.82140 0.66462 0.86048 0.85419 0.81806 0.83472 0.92358 0.87447 0.86709 0.74756 0.87460 0.82302 0.69567 0.87265 0.86982 0.87426 0.86717 0.737706 0.67201 0.73675 0.73420 0.70154 0.81358 0.91221 0.88987 0.86610 0.88418 0.88567 6 0.84297 0.86117 -0.0162508 6 0.75794 0.81198 -0.0540436 0.93955 0.147040 insignificant 1 1 insignificant 0.94324 0.296594 insignificant 1 1 insignificant -0.0193285 0.54355 insignificant 1 insignificant 0.84291 0.7496274 0.09666189 6 0.77525 0.75628 0.0189639 1.0868e-07 0.97717 weaklyHypermeth 7.7632e-06 1 weaklyHypermeth 2.5895e-03 0.99420 weaklyHypermeth 1.4386e-01 1 insignificant 0.0817306 9.5988e-03 weaklyHypermeth 5.3327e-01 insignificant 0.84297 0.87331 -0.046377 6 0.75794 0.86714 -0.109200 0.996303 1.4986e-02 weaklyHypometh 1 1.00000000 insignificant 0.999272 0.01291600 weaklyHypometh 1 1.00000 insignificant -5.5940e-02 0.07540741 insignificant 1.00000 insignificant 0.86172 0.7496274 0.1122876 6 0.85112 0.75628 0.0948395 2.4387e-09 0.99997 weaklyHypermeth 2.4387e-07 1 weaklyHypermeth 9.3991e-04 0.99992 weaklyHypermeth 7.2301e-02 1 weaklyHypermeth 0.101059 1.1502e-02 weaklyHypermeth 7.1885e-01 insignificant 0.86117 0.87331 -0.0304422 6 0.81198 0.86714 -0.0551568 0.998688 2.2987e-02 weaklyHypometh 1 1.0000000 insignificant 0.995739 0.03543054 weaklyHypometh 1 1.00000 insignificant -0.03661144 0.3336424 insignificant 1.00000 insignificant 0.7496274 0.87349 -0.142591 6 0.75628 0.87680 -0.120517 1.00000 7.3944e-07 weaklyHypometh 1 1.2324e-04 weaklyHypometh 1.00000 5.9404e-04 weaklyHypometh 1 0.08795372 weaklyHypometh -0.137671 0.0019822 weaklyHypometh 0.38004 insignificant chr4 99630895 99631895 17425 RAP1GDS1 ENSG00000138698 0.75245 377 10 0.70104 236 10 0.69966 138 10 0.82938 186 10 0.70446 119 7 0.74024 424 10 0.75424 89 7 0.71429 105 5 0.66956 107 7 0.74111 116 7 0.77298 280 7 0.75578 56 7 0.62798 80 7 0.59167 38 4 0.65855 120 7 0.83891 66 5 0.80000 9 0 0.89485 175 8 0.91472 136 7 0.74324 352 10 0.84055 192 7 0.70512 80 7 0.85091 261 10 0.58556 173 4 0.80994 48 2 0.61201 177 7 0.77819 150 8 0.66604 88 7 0.84924 88 7 0.72746 273 10 0.75251 190 10 0.72651 512 10 0.723790 161 10 0.90476 73 5 0.57820 215 9 0.79265 64 5 0.601622 127 7 0.70928 212 10 0.89784 349 10 0.85430 336 10 0.83005 223 10 0.90980 308 10 0.86303 297 10 0.74786 0.70858 0.60918 0.85922 0.73715 0.78454 0.77687 0.73812 0.78110 0.77450 0.83020 0.85426 0.74262 0.79946 0.74242 0.85936 0.80663 0.88367 0.84646 0.75749 0.85312 0.75138 0.89805 0.81053 0.84404 0.65959 0.82827 0.79022 0.87632 0.75722 0.74641 0.77364 0.736264 0.87891 0.62700 0.75029 0.64521 0.78587 0.89484 0.87848 0.83995 0.93636 0.91780 2 0.76084 0.75538 -0.0219284 10 0.74974 0.71668 0.0330612 0.66640 0.411396 insignificant 1 1 insignificant 0.69658 0.523854 insignificant 1 1 insignificant 0.0032514 0.91924 insignificant 1 insignificant 0.76069 0.6807512 0.06113301 10 0.72699 0.71473 0.0122596 4.5124e-03 0.91950 weaklyHypermeth 1.5041e-01 1 insignificant 6.6808e-02 0.98784 insignificant 1.0000e+00 1 insignificant 0.0268712 6.2805e-01 insignificant 1.0000e+00 insignificant 0.76069 0.91011 -0.095193 10 0.70807 0.88702 -0.178951 1.000000 2.7529e-07 weaklyHypometh 1 0.00027529 weaklyHypometh 0.999947 0.00038403 weaklyHypometh 1 0.19201 insignificant -1.2575e-01 0.00004671 weaklyHypometh 0.04671 weaklyHypometh 0.75561 0.6807512 0.0839555 10 0.73637 0.71473 0.0216473 3.3897e-03 0.97989 weaklyHypermeth 1.2554e-01 1 insignificant 6.7615e-02 0.98923 insignificant 1.0000e+00 1 insignificant 0.023620 6.8388e-01 insignificant 1.0000e+00 insignificant 0.75583 0.90993 -0.0768066 10 0.76001 0.86442 -0.1044143 0.999999 5.1940e-06 weaklyHypometh 1 0.0051940 weaklyHypometh 0.999969 0.00109284 weaklyHypometh 1 0.54642 insignificant -0.12900059 0.0005754 weaklyHypometh 0.52932 insignificant 0.6803760 0.90993 -0.153610 10 0.68620 0.86442 -0.178226 1.00000 1.9122e-09 weaklyHypometh 1 6.3740e-07 weaklyHypometh 1.00000 1.0453e-04 weaklyHypometh 1 0.03484414 weaklyHypometh -0.152620 0.0262333 weaklyHypometh 1.00000 insignificant chr4 107137695 107138695 17553 NPNT ENSG00000168743 0.68123 185 5 0.77203 150 9 0.61004 100 9 0.75981 136 9 0.81066 92 9 0.80774 244 9 0.66049 78 5 0.85647 146 8 0.50926 88 6 0.80974 79 6 0.71821 264 9 0.63968 35 3 0.76613 113 9 0.71032 38 6 0.85447 124 9 0.84603 37 4 0.95714 37 4 0.85366 117 9 0.79240 159 9 0.69249 303 9 0.70952 38 2 0.81270 71 9 0.85104 128 5 0.75537 94 9 0.82512 75 7 0.79972 228 9 0.79680 95 9 0.80584 52 5 0.76922 161 8 0.83402 208 9 0.74646 164 9 0.70553 313 9 0.762711 160 8 0.56906 90 9 0.74190 155 9 0.62945 55 4 0.531176 98 5 0.80432 162 9 0.72997 210 7 0.75283 173 9 0.80132 149 9 0.83710 145 5 0.79773 164 9 0.80404 0.77852 0.72032 0.79945 0.83975 0.82574 0.72588 0.86082 0.71507 0.90658 0.84805 0.75546 0.75879 0.81608 0.87784 0.88732 0.89451 0.85649 0.89543 0.81018 0.85540 0.78882 0.90059 0.87716 0.82083 0.85041 0.84834 0.83704 0.88279 0.86545 0.77539 0.86811 0.833999 0.60230 0.73654 0.66634 0.76251 0.80715 0.81436 0.86291 0.83834 0.85202 0.92499 3 0.80990 0.82483 -0.0165536 9 0.71537 0.71687 -0.0014997 0.95112 0.255914 insignificant 1 1 insignificant 0.96447 0.073990 insignificant 1 1 insignificant -0.0288800 0.29357 insignificant 1 insignificant 0.81071 0.7263889 0.08893115 9 0.73180 0.57858 0.1532238 6.3208e-05 0.99999 weaklyHypermeth 3.0099e-03 1 weaklyHypermeth 8.6855e-04 0.99998 weaklyHypermeth 6.2039e-02 1 weaklyHypermeth 0.0822965 1.4877e-01 insignificant 1.0000e+00 insignificant 0.81113 0.86445 -0.030201 9 0.73998 0.72730 0.012679 0.627445 8.6523e-02 insignificant 1 1.00000000 insignificant 0.737728 0.39112235 insignificant 1 1.00000 insignificant -2.8390e-02 0.35783820 insignificant 1.00000 insignificant 0.82684 0.7263889 0.1020495 9 0.73033 0.57858 0.1517494 2.4169e-06 1.00000 weaklyHypermeth 1.7264e-04 1 weaklyHypermeth 2.0021e-05 1.00000 weaklyHypermeth 2.5027e-03 1 weaklyHypermeth 0.111176 5.9502e-02 insignificant 1.0000e+00 insignificant 0.82673 0.86445 -0.0134072 9 0.75693 0.72730 0.0296286 0.377563 1.9538e-01 insignificant 1 1.0000000 insignificant 0.197994 0.51618435 insignificant 1 1.00000 insignificant 0.00048972 0.9837683 insignificant 1.00000 insignificant 0.7284123 0.86548 -0.118649 9 0.70715 0.80812 -0.100964 0.99611 2.5019e-05 weaklyHypometh 1 1.5637e-03 weaklyHypometh 0.99941 6.0046e-04 weaklyHypometh 1 0.08795372 weaklyHypometh -0.110687 0.0627750 insignificant 1.00000 insignificant chr4 108267095 108268095 17561 DKK2 ENSG00000155011 0.80983 81 5 0.65556 77 3 0.55556 14 2 0.72016 96 5 0.85556 37 3 0.66794 92 5 0.91827 23 1 0.75980 50 3 0.69444 17 1 0.95238 13 1 0.79040 45 3 0.66667 5 0 0.90278 28 3 0.97222 29 3 0.59643 25 3 0.88889 5 0 0.78996 370 3 0.73279 91 7 0.86667 14 2 0.68016 71 5 0.86667 14 2 0.66667 6 0 0.84921 49 3 0.44444 8 0 0.76190 33 3 0.73537 121 5 0.68452 22 3 0.67222 12 1 0.81046 29 3 0.73331 100 5 0.68500 131 5 0.85463 95 5 0.737179 46 3 0.54212 27 3 0.65600 64 3 0.83333 5 0 0.675926 37 3 0.67856 93 5 0.64421 75 4 0.78261 102 5 0.76301 100 5 0.66000 40 3 0.74015 84 5 0.92983 0.71171 0.54955 0.79207 0.86396 0.89120 0.89449 0.75874 0.70045 0.94208 0.79341 0.70270 0.89977 0.96622 0.79421 0.86486 0.87878 0.82277 0.88108 0.78454 0.88108 0.75200 0.91248 0.50450 0.78250 0.80383 0.70319 0.67162 0.80551 0.78973 0.73258 0.80894 0.738565 0.56668 0.76432 0.85135 0.65691 0.74105 0.75989 0.81610 0.84009 0.83333 0.77733 0 0.78867 0.76613 0.0200513 5 0.75693 0.81016 -0.0532324 0.45491 0.622719 insignificant 1 1 insignificant 0.40850 0.236709 insignificant 1 1 insignificant 0.0434552 0.32262 lowCoverage 1 lowCoverage 0.78867 0.6911765 0.11627808 3 0.75693 0.61913 0.1377935 5.7808e-04 0.99259 lowCoverage 2.3123e-02 1 lowCoverage 5.1316e-02 0.97824 lowCoverage 1.0000e+00 1 lowCoverage 0.0866345 9.7675e-02 lowCoverage 1.0000e+00 lowCoverage 0.78961 0.79551 0.012782 5 0.75553 0.72843 0.027096 0.346868 8.7477e-01 insignificant 1 1.00000000 insignificant 0.408398 0.69058740 insignificant 1 1.00000 insignificant 5.5826e-02 0.17353060 lowCoverage 1.00000 lowCoverage 0.76613 0.6911765 0.0822689 3 0.81016 0.61913 0.1910259 1.3247e-01 0.99957 lowCoverage 1.0000e+00 1 lowCoverage 2.8653e-01 0.99969 lowCoverage 1.0000e+00 1 lowCoverage 0.043179 4.1908e-01 lowCoverage 1.0000e+00 lowCoverage 0.76537 0.79551 -0.0057674 5 0.73422 0.72843 0.0057877 0.629643 4.9063e-01 insignificant 1 1.0000000 insignificant 0.756600 0.66790327 insignificant 1 1.00000 insignificant 0.01237070 0.7810126 lowCoverage 1.00000 lowCoverage 0.6940299 0.79551 -0.096891 3 0.66679 0.72843 -0.061648 0.95285 6.8644e-02 lowCoverage 1 1.0000e+00 lowCoverage 0.98631 1.9530e-01 lowCoverage 1 1.00000000 lowCoverage -0.030809 0.5383163 lowCoverage 1.00000 lowCoverage chr4 109146895 109147895 17578 HADH ENSG00000138796 0.68671 70 7 0.54350 91 6 0.52604 34 3 0.70899 65 7 0.74553 141 7 0.79716 57 3 0.72967 92 7 0.75848 74 7 0.83371 87 7 0.77738 62 7 0.84018 106 4 0.65079 90 7 0.81028 124 7 0.81926 58 4 0.76429 52 6 0.70000 41 7 0.79959 460 7 0.64167 55 6 0.74545 32 3 0.81250 26 3 0.75000 19 0 0.83333 12 0 0.82422 87 7 0.64815 32 3 0.82639 27 3 0.38431 74 3 0.43750 13 0 0.70370 23 2 0.86494 73 7 0.85906 75 3 0.90000 53 3 0.83882 69 3 0.630429 83 7 0.78680 46 3 0.56440 52 3 0.50000 18 3 0.481602 46 3 0.75069 32 3 0.66048 59 7 0.79435 110 7 0.80318 86 7 0.74193 110 7 0.76389 63 3 0.67568 0.64237 0.42642 0.78148 0.76724 0.71698 0.69433 0.69531 0.74094 0.78387 0.73267 0.71410 0.80950 0.81810 0.72181 0.78369 0.74247 0.64259 0.75861 0.58511 0.94681 0.72100 0.80605 0.75709 0.72341 0.62111 0.59998 0.67021 0.86460 0.81414 0.77589 0.77408 0.578930 0.70978 0.47371 0.51641 0.46971 0.66560 0.65115 0.68944 0.72693 0.72306 0.71986 2 0.73748 0.76661 -0.0325631 3 0.71399 0.73575 -0.0217659 0.93819 0.243552 lowCoverage 1 1 lowCoverage 0.99494 0.185332 lowCoverage 1 1 lowCoverage -0.0046416 0.93122 lowCoverage 1 lowCoverage 0.73947 0.5992780 0.13214931 3 0.74204 0.70932 0.0327154 6.9192e-07 0.99847 lowCoverage 4.3245e-05 1 lowCoverage 3.0428e-03 0.95663 lowCoverage 1.5214e-01 1 lowCoverage 0.1155720 8.0179e-02 lowCoverage 1.0000e+00 lowCoverage 0.73947 0.72897 0.010648 7 0.74204 0.79817 -0.056139 0.707683 8.1073e-01 insignificant 1 1.00000000 insignificant 0.815893 0.82735546 insignificant 1 1.00000 insignificant -1.8206e-02 0.58704285 insignificant 1.00000 insignificant 0.77034 0.5992780 0.1662166 3 0.78972 0.70932 0.0804040 1.5867e-04 0.99964 lowCoverage 7.5556e-03 1 lowCoverage 3.6648e-03 0.99806 lowCoverage 1.9289e-01 1 lowCoverage 0.120214 1.1660e-01 lowCoverage 1.0000e+00 lowCoverage 0.77034 0.72897 0.0447035 3 0.78972 0.79817 -0.0084504 0.387792 9.2279e-01 lowCoverage 1 1.0000000 lowCoverage 0.252837 0.96816480 lowCoverage 1 1.00000 lowCoverage -0.01356402 0.8092874 lowCoverage 1.00000 lowCoverage 0.5992780 0.72897 -0.120093 3 0.70932 0.79817 -0.088854 0.99926 2.1996e-03 lowCoverage 1 8.4601e-02 lowCoverage 0.99328 3.5109e-02 lowCoverage 1 1.00000000 lowCoverage -0.133778 0.0538712 lowCoverage 1.00000 lowCoverage chr4 113903595 113904595 17688 ENSG00000202536 0.80062 278 9 0.71579 186 9 0.75838 98 9 0.85187 163 9 0.63975 104 7 0.77338 301 9 0.70546 100 9 0.70700 122 9 0.64001 108 9 0.77286 122 9 0.76630 253 9 0.86111 71 5 0.72055 87 8 0.71429 42 5 0.85580 123 9 0.77699 81 8 0.65075 157 7 0.61603 163 9 0.77569 199 9 0.76780 254 9 0.74869 74 7 0.86825 43 3 0.76297 162 9 0.58972 85 5 0.71274 219 7 0.86327 244 9 0.76405 98 10 0.71338 52 6 0.79721 152 9 0.77087 178 9 0.85356 216 9 0.80802 257 9 0.703043 145 7 0.57276 132 9 0.56199 178 9 0.69865 60 6 0.712405 124 8 0.79274 201 9 0.81520 210 9 0.89998 221 9 0.82329 215 9 0.81224 141 9 0.82607 171 9 0.90238 0.74059 0.70483 0.84304 0.77454 0.79248 0.76781 0.81335 0.76142 0.77351 0.77643 0.88272 0.76051 0.74721 0.88741 0.81170 0.74586 0.74645 0.86068 0.80713 0.81553 0.82725 0.77538 0.74811 0.75838 0.84888 0.80305 0.88107 0.84152 0.87295 0.87003 0.83312 0.714937 0.57262 0.68952 0.68030 0.78329 0.81485 0.84381 0.90699 0.82165 0.80743 0.84466 6 0.80339 0.84607 -0.0327347 9 0.65209 0.64499 0.0071044 0.99562 0.030538 weaklyHypometh 1 1 insignificant 0.99066 0.084656 insignificant 1 1 insignificant -0.0275406 0.33051 insignificant 1 insignificant 0.80386 0.7035714 0.09509635 9 0.66112 0.54541 0.1157138 1.0314e-04 1.00000 weaklyHypermeth 4.6880e-03 1 weaklyHypermeth 2.5234e-02 0.99992 weaklyHypermeth 7.4960e-01 1 insignificant 0.0699217 1.2210e-01 insignificant 1.0000e+00 insignificant 0.80575 0.85177 -0.047704 9 0.77779 0.83839 -0.060601 0.999199 9.3488e-03 weaklyHypometh 1 1.00000000 insignificant 0.980078 0.01641652 weaklyHypometh 1 1.00000 insignificant -9.1834e-02 0.00151334 weaklyHypometh 0.26591 insignificant 0.84772 0.7035714 0.1271908 9 0.76276 0.54541 0.2173524 1.5087e-07 1.00000 weaklyHypermeth 1.2572e-05 1 weaklyHypermeth 5.6781e-04 0.99994 weaklyHypermeth 5.1619e-02 1 weaklyHypermeth 0.097462 4.9073e-02 weaklyHypermeth 1.0000e+00 insignificant 0.85427 0.85177 -0.0103276 9 0.82158 0.83839 -0.0168156 0.887738 2.5881e-01 insignificant 1 1.0000000 insignificant 0.581188 0.28146916 insignificant 1 1.00000 insignificant -0.06429316 0.0360842 weaklyHypometh 1.00000 insignificant 0.7106538 0.85177 -0.142554 9 0.69017 0.83839 -0.148219 1.00000 1.1888e-05 weaklyHypometh 1 9.1448e-04 weaklyHypometh 0.99999 3.2060e-03 weaklyHypometh 1 0.27460666 insignificant -0.161755 0.0050637 weaklyHypometh 0.38951 insignificant chr4 119968295 119969295 17740 METTL14 ENSG00000145388 0.92477 191 7 0.72134 109 7 0.61523 86 7 0.93537 204 7 0.84731 66 7 0.84393 372 7 0.83214 46 6 0.86306 146 7 0.89487 82 7 0.79286 62 7 0.87164 237 7 0.90000 31 3 0.94368 87 7 0.80312 54 7 0.83939 66 7 1.00000 9 0 1.00000 1 0 0.88022 210 7 0.87464 216 7 0.78115 235 7 0.90816 30 4 0.83333 42 6 0.89518 123 7 0.90340 40 6 1.00000 27 3 0.85057 202 7 0.73857 71 6 0.77083 23 0 0.74055 146 7 0.85770 180 7 0.87178 145 7 0.89599 329 7 0.735858 134 7 0.79674 81 7 0.81429 44 3 0.80556 11 0 0.735194 76 7 0.89958 185 7 0.79942 163 7 0.89780 181 7 0.93071 149 7 0.87900 121 7 0.78400 204 7 0.92139 0.73393 0.69116 0.93015 0.83543 0.88857 0.82987 0.86120 0.87766 0.79402 0.87070 0.89873 0.93546 0.77401 0.83778 0.90589 NA 0.87474 0.86745 0.88701 0.91707 0.83475 0.88935 0.90416 1.00000 0.84505 0.72030 0.75847 0.83524 0.85903 0.86312 0.89124 0.731166 0.79222 0.82670 0.83094 0.73948 0.89497 0.78678 0.89923 0.92301 0.87906 0.88942 0 0.88048 0.88292 -0.0018364 7 0.84023 0.82315 0.0170830 0.72371 0.725519 insignificant 1 1 insignificant 0.88849 0.498596 insignificant 1 1 insignificant 0.0027310 0.92779 insignificant 1 insignificant 0.88129 0.8154426 0.05251220 7 0.87098 0.81869 0.0522932 1.6530e-02 0.99097 weaklyHypermeth 4.2384e-01 1 insignificant 3.9080e-02 0.99284 weaklyHypermeth 1.0000e+00 1 insignificant 0.0603672 8.2536e-02 insignificant 1.0000e+00 insignificant 0.88048 0.89853 -0.024421 7 0.84023 0.77670 0.063535 0.777708 2.1876e-01 insignificant 1 1.00000000 insignificant 0.862570 0.43923153 insignificant 1 1.00000 insignificant 4.9729e-05 0.99889530 insignificant 1.00000 insignificant 0.88348 0.8154426 0.0504803 7 0.86931 0.81869 0.0506270 3.4112e-02 0.99660 weaklyHypermeth 7.1067e-01 1 insignificant 5.0819e-02 0.99702 insignificant 1.0000e+00 1 insignificant 0.057636 1.0683e-01 insignificant 1.0000e+00 insignificant 0.88292 0.89853 -0.0225491 7 0.82315 0.77670 0.0464525 0.941604 1.4353e-01 insignificant 1 1.0000000 insignificant 0.841426 0.66606850 insignificant 1 1.00000 insignificant -0.00268130 0.9422459 insignificant 1.00000 insignificant 0.8154426 0.89963 -0.067906 7 0.81869 0.88765 -0.068967 0.99756 1.7798e-02 weaklyHypometh 1 4.6838e-01 insignificant 0.99903 1.5224e-02 weaklyHypometh 1 0.60897356 insignificant -0.060317 0.1467532 insignificant 1.00000 insignificant chr4 129448895 129449895 17883 PGRMC2 ENSG00000164040 0.68966 138 6 0.84028 85 6 0.79167 18 0 0.86667 36 6 0.85000 22 3 0.87035 180 6 0.71429 23 3 0.68882 70 6 0.77778 15 0 0.91667 27 3 0.66700 104 6 0.33333 9 0 0.69306 73 6 NA 0 0 0.90278 41 3 1.00000 2 0 0.83333 6 0 0.69195 104 6 0.91077 59 6 0.78470 119 6 0.71032 51 3 0.73611 27 3 0.78909 123 6 0.96970 30 3 0.70833 22 0 0.84962 157 6 0.86023 62 3 0.94444 11 0 0.69167 41 6 0.81767 124 6 0.78025 111 6 0.73105 239 6 0.803571 76 6 0.83059 57 5 0.52222 51 3 0.48611 42 3 0.833333 24 1 0.81241 140 6 0.78025 114 6 0.85714 126 6 0.78267 129 6 0.91667 73 3 0.71242 119 6 0.77289 0.85951 0.73077 0.89744 0.90171 0.88177 0.76766 0.74232 0.78632 0.91026 0.76480 0.40075 0.75021 NA 0.92521 0.88907 0.87179 0.76413 0.91544 0.83548 0.77350 0.75855 0.82518 0.83291 0.77564 0.88022 0.80559 0.90598 0.74267 0.85425 0.79763 0.78043 0.848901 0.84404 0.81118 0.70299 0.81197 0.85689 0.81121 0.89011 0.83814 0.93590 0.77350 0 0.83112 0.80962 0.0017754 6 0.79335 0.78959 0.0037522 0.73224 0.707261 insignificant 1 1 insignificant 0.58459 0.735931 insignificant 1 1 insignificant -0.0188761 0.66013 lowCoverage 1 lowCoverage 0.83112 0.7871795 0.00065814 6 0.79335 0.78631 0.0070353 6.2640e-01 0.62151 insignificant 1.0000e+00 1 insignificant 4.8743e-01 0.77252 insignificant 1.0000e+00 1 insignificant 0.0654580 4.0728e-01 lowCoverage 1.0000e+00 lowCoverage 0.83112 0.90018 -0.018083 6 0.79335 0.80321 -0.009860 0.909571 2.3184e-01 insignificant 1 1.00000000 insignificant 0.912785 0.16490632 insignificant 1 1.00000 insignificant -2.9666e-02 0.55052402 lowCoverage 1.00000 lowCoverage 0.80962 0.7871795 0.0032353 6 0.78959 0.78631 0.0032831 6.8045e-01 0.29851 insignificant 1.0000e+00 1 insignificant 7.8901e-01 0.58016 insignificant 1.0000e+00 1 insignificant 0.084334 2.8182e-01 lowCoverage 1.0000e+00 lowCoverage 0.80962 0.90018 -0.0209359 6 0.78959 0.80321 -0.0136122 0.944248 4.9117e-02 weaklyHypometh 1 1.0000000 insignificant 0.976122 0.17807864 insignificant 1 1.00000 insignificant -0.01078964 0.8123888 lowCoverage 1.00000 lowCoverage 0.7871795 0.90018 -0.017195 6 0.78631 0.80321 -0.016895 0.80554 3.2206e-01 insignificant 1 1.0000e+00 insignificant 0.84732 3.7948e-01 insignificant 1 1.00000000 insignificant -0.095124 0.2462624 lowCoverage 1.00000 lowCoverage chr4 129488795 129489795 17890 PGRMC2 ENSG00000164040 0.75298 65 6 0.74835 70 6 0.74027 69 6 0.82143 33 3 0.78760 67 6 0.84848 68 6 0.70867 65 3 0.75454 70 6 0.75992 53 6 0.72024 61 6 0.73632 119 6 0.59573 38 3 0.83942 82 6 0.68000 20 3 0.85357 60 3 0.68254 26 1 0.78283 64 3 0.44444 12 0 0.80397 69 6 0.82765 55 6 0.85417 26 1 0.58333 9 0 0.80556 47 6 0.92063 26 3 0.69444 14 0 0.79578 63 6 0.70635 38 3 0.93333 19 3 0.58259 50 6 0.81984 94 6 0.75024 62 5 0.79060 91 6 0.346273 68 6 0.38268 57 6 0.28186 126 6 0.16667 9 0 0.165675 38 5 0.54806 77 6 0.70357 30 4 0.63701 58 6 0.46182 33 3 0.54167 16 0 0.60000 43 4 0.72421 0.72926 0.74299 0.80882 0.69268 0.81283 0.62605 0.77789 0.74463 0.66106 0.78779 0.62617 0.81990 0.79665 0.86975 0.61345 0.73059 0.69281 0.78665 0.83336 0.82843 0.60784 0.78431 0.90663 0.80038 0.76777 0.67880 0.96078 0.60784 0.71093 0.79645 0.69784 0.366764 0.46736 0.33968 0.19608 0.20226 0.59657 0.65476 0.70766 0.59499 0.65196 0.75490 0 0.78045 0.77922 -0.0037904 6 0.72982 0.74737 -0.0175437 0.38858 0.371151 insignificant 1 1 insignificant 0.73024 0.122954 insignificant 1 1 insignificant -0.0252911 0.52503 lowCoverage 1 lowCoverage 0.78201 0.3226667 0.47565869 6 0.77310 0.35438 0.4187157 8.2119e-27 1.00000 hypermethylated 2.0530e-24 1 hypermethylated 1.8275e-09 1.00000 hypermethylated 6.0917e-07 1 hypermethylated 0.4292460 3.8074e-04 lowCoverage 3.4612e-02 lowCoverage 0.78045 0.70000 0.050770 4 0.72982 0.54247 0.187350 0.025229 9.9493e-01 lowCoverage 1 1.00000000 lowCoverage 0.114395 0.98588709 lowCoverage 1 1.00000 lowCoverage 1.5563e-01 0.01413209 lowCoverage 0.92755 lowCoverage 0.78072 0.3226667 0.4535428 6 0.76316 0.35438 0.4087739 3.9232e-18 0.99944 hypermethylated 6.5387e-16 1 hypermethylated 2.3272e-08 1.00000 hypermethylated 5.8179e-06 1 hypermethylated 0.454537 1.3618e-04 lowCoverage 1.7023e-02 lowCoverage 0.77922 0.70000 0.0351736 4 0.74737 0.54247 0.2048939 0.066233 8.7798e-01 lowCoverage 1 1.0000000 lowCoverage 0.088942 0.98153950 lowCoverage 1 1.00000 lowCoverage 0.18092456 0.0070730 lowCoverage 1.00000 lowCoverage 0.3226667 0.71186 -0.253489 4 0.35438 0.72330 -0.368915 0.99985 4.8361e-06 lowCoverage 1 4.8361e-04 lowCoverage 0.99998 2.2472e-03 lowCoverage 1 0.24969417 lowCoverage -0.273612 0.0047237 lowCoverage 0.38951 lowCoverage chr4 129693595 129694595 17917 PGRMC2 ENSG00000164040 0.92390 228 5 0.71994 112 5 0.61919 102 5 0.77025 175 6 0.70213 70 5 0.83841 231 5 0.83087 101 5 0.76766 162 5 0.76299 171 5 0.70596 165 5 0.76142 129 5 0.61121 67 5 0.81363 211 5 0.80424 86 5 0.82733 156 5 0.76000 38 3 0.53333 21 2 0.55690 176 5 0.78905 72 3 0.91270 161 5 0.65278 54 5 0.50659 79 5 0.75579 144 5 0.92389 50 5 0.71000 54 4 0.89872 201 5 0.73255 54 5 0.64874 63 5 0.68310 69 5 0.62856 257 7 0.79111 187 7 0.53143 109 5 0.009756 108 5 0.00000 51 2 0.00000 77 5 0.00000 24 3 0.013333 81 5 0.11111 142 5 0.89931 143 5 0.48879 123 3 0.67956 103 3 0.55980 96 2 0.51217 89 2 0.84645 0.72937 0.59702 0.76130 0.73290 0.81434 0.83260 0.76044 0.74375 0.66889 0.73369 0.80597 0.87942 0.74312 0.81619 0.69875 0.70625 0.46372 0.87861 0.87958 0.85766 0.54922 0.75821 0.91880 0.63062 0.79670 0.64563 0.74949 0.66195 0.85486 0.86333 0.62990 0.017378 0.00000 0.00000 0.00125 0.00625 0.00000 0.81406 0.55601 0.63401 0.47200 0.58951 2 0.76187 0.76003 0.0047683 5 0.80768 0.66272 0.1449544 0.94198 0.999146 insignificant 1 1 insignificant 0.83274 0.999997 insignificant 1 1 insignificant 0.0452828 0.31211 lowCoverage 1 lowCoverage 0.76209 0.0082816 0.75362556 5 0.81194 0.11453 0.6974098 1.0709e-49 1.00000 hypermethylated 5.3545e-47 1 hypermethylated 1.3086e-12 1.00000 hypermethylated 6.5428e-10 1 hypermethylated 0.7281888 6.6958e-17 lowCoverage 2.2319e-14 lowCoverage 0.76209 0.62094 0.126029 2 0.81194 0.59372 0.218221 0.022371 9.9511e-01 lowCoverage 1 1.00000000 lowCoverage 0.054833 0.94675642 lowCoverage 1 1.00000 lowCoverage 1.2263e-01 0.18361410 lowCoverage 1.00000 lowCoverage 0.76256 0.0082816 0.7513002 5 0.80868 0.11453 0.6941474 1.6860e-39 1.00000 hypermethylated 8.4302e-37 1 hypermethylated 8.8164e-11 1.00000 hypermethylated 4.4082e-08 1 hypermethylated 0.682906 4.2076e-11 lowCoverage 2.1038e-08 lowCoverage 0.76256 0.62094 0.1347223 2 0.80868 0.59372 0.2149588 0.042515 8.8691e-01 lowCoverage 1 1.0000000 lowCoverage 0.157465 0.81525396 lowCoverage 1 1.00000 lowCoverage 0.07734766 0.3919698 lowCoverage 1.00000 lowCoverage 0.0082816 0.62094 -0.614245 2 0.11453 0.59372 -0.479189 1.00000 2.6825e-15 lowCoverage 1 1.3412e-12 lowCoverage 0.99997 3.7601e-07 lowCoverage 1 0.00018800 lowCoverage -0.605558 0.0009213 lowCoverage 0.23032 lowCoverage chr4 129693795 129694795 17918 PGRMC2 ENSG00000164040 0.92390 228 5 0.71994 112 5 0.61919 102 5 0.77025 175 6 0.70213 70 5 0.83841 231 5 0.83087 101 5 0.76766 162 5 0.76299 171 5 0.70596 165 5 0.76142 129 5 0.61121 67 5 0.81363 211 5 0.80424 86 5 0.82733 156 5 0.76000 38 3 0.53333 21 2 0.55690 176 5 0.78905 72 3 0.91270 161 5 0.65278 54 5 0.50659 79 5 0.75579 144 5 0.92389 50 5 0.71000 54 4 0.89872 201 5 0.73255 54 5 0.64874 63 5 0.68310 69 5 0.62856 257 7 0.79111 187 7 0.53143 109 5 0.009756 108 5 0.00000 51 2 0.00000 77 5 0.00000 24 3 0.013333 81 5 0.11111 142 5 0.89931 143 5 0.48879 123 3 0.67956 103 3 0.55980 96 2 0.51217 89 2 0.84645 0.72937 0.59702 0.76130 0.73290 0.81434 0.83260 0.76044 0.74375 0.66889 0.73369 0.80597 0.87942 0.74312 0.81619 0.69875 0.70625 0.46372 0.87861 0.87958 0.85766 0.54922 0.75821 0.91880 0.63062 0.79670 0.64563 0.74949 0.66195 0.85486 0.86333 0.62990 0.017378 0.00000 0.00000 0.00125 0.00625 0.00000 0.81406 0.55601 0.63401 0.47200 0.58951 2 0.76187 0.76003 0.0047683 5 0.80768 0.66272 0.1449544 0.94198 0.999146 insignificant 1 1 insignificant 0.83274 0.999997 insignificant 1 1 insignificant 0.0452828 0.31211 lowCoverage 1 lowCoverage 0.76209 0.0082816 0.75362556 5 0.81194 0.11453 0.6974098 1.0709e-49 1.00000 hypermethylated 5.3545e-47 1 hypermethylated 1.3086e-12 1.00000 hypermethylated 6.5428e-10 1 hypermethylated 0.7281888 6.6958e-17 lowCoverage 2.2319e-14 lowCoverage 0.76209 0.62094 0.126029 2 0.81194 0.59372 0.218221 0.022371 9.9511e-01 lowCoverage 1 1.00000000 lowCoverage 0.054833 0.94675642 lowCoverage 1 1.00000 lowCoverage 1.2263e-01 0.18361410 lowCoverage 1.00000 lowCoverage 0.76256 0.0082816 0.7513002 5 0.80868 0.11453 0.6941474 1.6860e-39 1.00000 hypermethylated 8.4302e-37 1 hypermethylated 8.8164e-11 1.00000 hypermethylated 4.4082e-08 1 hypermethylated 0.682906 4.2076e-11 lowCoverage 2.1038e-08 lowCoverage 0.76256 0.62094 0.1347223 2 0.80868 0.59372 0.2149588 0.042515 8.8691e-01 lowCoverage 1 1.0000000 lowCoverage 0.157465 0.81525396 lowCoverage 1 1.00000 lowCoverage 0.07734766 0.3919698 lowCoverage 1.00000 lowCoverage 0.0082816 0.62094 -0.614245 2 0.11453 0.59372 -0.479189 1.00000 2.6825e-15 lowCoverage 1 1.3412e-12 lowCoverage 0.99997 3.7601e-07 lowCoverage 1 0.00018800 lowCoverage -0.605558 0.0009213 lowCoverage 0.23032 lowCoverage chr4 140309595 140310595 18011 ENSG00000208953 0.757162 290 13 0.673004 220 12 0.673129 69 7 0.78103 253 12 0.710533 122 12 0.84450 154 11 0.755257 115 9 0.801068 138 11 0.619886 87 10 0.782778 75 8 0.744649 320 12 0.513426 75 8 0.86210 142 10 0.802851 115 10 0.729953 91 8 0.731258 56 5 0.862500 31 2 0.756249 293 8 0.832168 83 9 0.78808 101 9 0.86364 24 0 0.777778 12 0 0.700455 175 10 0.695928 78 9 0.89914 134 5 0.822166 137 13 0.679437 52 8 0.972222 30 2 0.771338 149 12 0.709225 120 10 0.790074 126 10 0.76402 95 11 0.656984 216 11 0.667110 135 10 0.65841 139 10 0.875000 52 2 0.644591 120 10 0.69812 133 12 0.769377 216 11 0.762955 219 10 0.787930 271 12 0.7660575 147 7 0.761806 266 12 0.840838 0.777033 0.738465 0.855544 0.696725 0.841913 0.745180 0.879693 0.649896 0.794992 0.812505 0.531130 0.839483 0.790581 0.784681 0.611713 0.798771 0.801792 0.815517 0.789796 0.862069 0.782057 0.825156 0.676149 0.87884 0.913738 0.729134 0.949425 0.816141 0.82818 0.809865 0.810405 0.720766 0.7120733 0.83765 0.965517 0.826705 0.7592101 0.804579 0.847555 0.815006 0.803440 0.873817 0 0.780686 0.80124 -0.0134995 9 0.77674 0.729426 0.04731008 0.651106 0.2075063 insignificant 1 1 insignificant 0.979407 0.041810 weaklyHypometh 1 1 insignificant -0.0360392 0.2731998 insignificant 1 insignificant 0.780652 0.753459 0.0425447 10 0.762698 0.668113 0.0945854 2.5788e-04 0.993823 weaklyHypermeth 9.7253e-03 1 weaklyHypermeth 3.8727e-02 0.915792 weaklyHypermeth 1.0000e+00 1 insignificant 0.0510430 0.24271752 insignificant 1.000000 insignificant 0.780885 0.836461 -0.04331645 11 0.792361 0.79837 -0.0060053 8.9595e-01 1.7142e-01 insignificant 1.0000e+00 1.000000 insignificant 8.5582e-01 4.1366e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0185456 0.3541206 insignificant 1.00000 insignificant 0.802480 0.753459 0.0588937 9 0.762201 0.668113 0.0940881 2.6120e-04 9.9893e-01 weaklyHypermeth 1.0448e-02 1.0000000 weaklyHypermeth 7.3670e-03 0.999515 weaklyHypermeth 3.0696e-01 1 insignificant 0.0870822 0.07583805 insignificant 1.000000 insignificant 0.802480 0.836168 -0.0229847 9 0.762201 0.76956 -0.0073604 4.4413e-01 1.7834e-01 insignificant 1.0000e+00 1.00000000 insignificant 1.1337e-01 0.9738361 insignificant 1.0000e+00 1 insignificant 0.0174936 0.5187191 insignificant 1.00000 insignificant 0.753459 0.836168 -0.0857218 10 0.668113 0.769561 -0.10144850 0.999794 3.4426e-04 weaklyHypometh 1 2.0251e-02 weaklyHypometh 0.990155 1.4106e-01 insignificant 1 1.0000e+00 insignificant -0.06958862 0.1096559 insignificant 1.00000 insignificant chr4 140412695 140413695 18020 ENSG00000206722 0.825502 268 9 0.621737 139 8 0.518572 98 8 0.74581 234 9 0.743998 82 7 0.68382 245 9 0.618436 121 8 0.758191 110 8 0.577798 104 8 0.682257 88 7 0.612753 217 8 0.718515 97 7 0.70143 121 8 0.831345 50 5 0.676923 127 8 0.747664 72 5 0.627678 339 8 0.733236 228 11 0.797654 113 7 0.70209 176 8 0.69167 45 5 0.933201 57 4 0.760611 162 10 0.703175 57 4 0.86023 68 7 0.737532 125 8 0.580492 75 7 0.747532 41 4 0.719408 133 8 0.677916 128 6 0.801383 108 7 0.65005 279 10 0.600786 126 8 0.505828 118 7 0.62218 123 8 0.785714 24 2 0.539660 90 7 0.60260 101 7 0.778834 206 9 0.803900 232 10 0.833749 229 9 0.7101008 215 7 0.758914 250 10 0.824223 0.720157 0.654287 0.764385 0.765114 0.765077 0.672787 0.780217 0.694439 0.788585 0.795324 0.779347 0.771361 0.758910 0.775183 0.785575 0.698013 0.780772 0.809787 0.838632 0.765476 0.917684 0.799382 0.708090 0.86718 0.739754 0.788895 0.822241 0.785262 0.74246 0.787666 0.787924 0.665121 0.5006482 0.70228 0.796542 0.665023 0.6431760 0.790689 0.821144 0.867491 0.791736 0.838144 2 0.756444 0.77934 -0.0057409 8 0.66123 0.666642 -0.00541387 0.759471 0.2883612 insignificant 1 1 insignificant 0.886028 0.140162 insignificant 1 1 insignificant -0.0423287 0.2109743 insignificant 1 insignificant 0.760199 0.652921 0.1273139 8 0.681899 0.568998 0.1129014 8.3444e-08 0.999976 weaklyHypermeth 5.5629e-06 1 weaklyHypermeth 7.0036e-04 0.998916 weaklyHypermeth 3.8909e-02 1 weaklyHypermeth 0.0868092 0.08518832 insignificant 1.000000 insignificant 0.761284 0.797703 -0.03874650 9 0.711839 0.74050 -0.0286567 9.4383e-01 2.1743e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 9.4959e-01 1.0860e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.0808289 0.0141529 weaklyHypometh 1.00000 insignificant 0.783740 0.652921 0.1327650 8 0.678205 0.568998 0.1092068 1.2215e-05 9.9928e-01 weaklyHypermeth 6.7858e-04 1.0000000 weaklyHypermeth 1.2122e-03 0.999841 weaklyHypermeth 6.3799e-02 1 weaklyHypermeth 0.1291379 0.02299699 weaklyHypermeth 0.851740 insignificant 0.785884 0.797703 -0.0391709 8 0.705682 0.74050 -0.0348141 9.4776e-01 1.6401e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant 9.0288e-01 0.1125120 insignificant 1.0000e+00 1 insignificant -0.0385002 0.2802533 insignificant 1.00000 insignificant 0.659130 0.810680 -0.1804210 8 0.622266 0.804653 -0.18238785 1.000000 1.5873e-06 weaklyHypometh 1 1.7636e-04 weaklyHypometh 0.999996 1.9533e-05 weaklyHypometh 1 4.8831e-03 weaklyHypometh -0.16763810 0.0064241 weaklyHypometh 0.45904 insignificant chr4 142221495 142222495 18071 RNF150 ENSG00000170153 0.747778 413 6 0.646106 101 6 0.662302 61 6 0.77157 243 6 0.844444 31 6 0.84457 205 6 0.785714 86 6 0.770960 63 6 0.846835 106 6 0.759028 89 6 0.744567 147 6 0.844968 51 6 0.86657 81 6 NA 0 0 0.807811 120 6 0.840278 55 6 0.751852 56 6 0.730100 339 6 0.768056 53 6 0.81894 214 6 0.57778 23 1 0.622114 127 6 0.649579 81 6 0.715278 38 5 0.78869 46 6 0.766026 93 6 0.612626 45 6 0.694444 25 2 0.815741 99 6 0.794760 110 6 0.762255 80 6 0.74767 198 6 0.778830 82 6 0.875947 121 6 0.66667 133 6 0.779167 71 6 0.695217 88 6 0.75199 104 6 0.733235 408 6 0.726249 303 6 0.766178 375 6 0.8194871 364 6 0.742636 394 6 0.764470 0.660581 0.673566 0.787598 0.845455 0.854849 0.803571 0.784762 0.852396 0.781605 0.763519 0.857678 0.876522 NA 0.820848 0.854009 0.760101 0.746684 0.781960 0.833605 0.596591 0.646042 0.665763 0.731534 0.80256 0.786385 0.635331 0.710227 0.834280 0.81637 0.779579 0.764893 0.796531 0.8881069 0.68182 0.802557 0.717573 0.7670507 0.753384 0.743823 0.785992 0.832075 0.761474 5 0.778839 0.73886 0.0444280 6 0.77302 0.726929 0.04609183 0.014554 0.9870848 weaklyHypermeth 1 1 insignificant 0.028574 0.978081 weaklyHypermeth 1 1 insignificant 0.0694608 0.0188817 weaklyHypermeth 1 insignificant 0.778839 0.781302 0.0049256 6 0.773021 0.765191 0.0078302 7.0685e-01 0.175646 insignificant 1.0000e+00 1 insignificant 7.7275e-01 0.245394 insignificant 1.0000e+00 1 insignificant 0.0237383 0.49699045 insignificant 1.000000 insignificant 0.778839 0.754338 0.01440542 6 0.773021 0.75790 0.0151251 2.8918e-01 7.6769e-01 insignificant 1.0000e+00 1.000000 insignificant 2.8607e-01 8.8741e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0241509 0.2976683 insignificant 1.00000 insignificant 0.738860 0.781302 -0.0390952 6 0.726929 0.765191 -0.0382617 9.8346e-01 2.4526e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant 9.9741e-01 0.080042 insignificant 1.0000e+00 1 insignificant -0.0457224 0.25326459 insignificant 1.000000 insignificant 0.738860 0.754338 -0.0303355 6 0.726929 0.75790 -0.0309667 9.6223e-01 2.1165e-01 insignificant 1.0000e+00 1.00000000 insignificant 9.0917e-01 0.5554249 insignificant 1.0000e+00 1 insignificant -0.0453099 0.1348086 insignificant 1.00000 insignificant 0.781302 0.754338 0.0087089 6 0.765191 0.757896 0.00729496 0.126325 9.3868e-01 insignificant 1 1.0000e+00 insignificant 0.292353 9.7655e-01 insignificant 1 1.0000e+00 insignificant 0.00041255 0.9907585 insignificant 1.00000 insignificant chr4 142422895 142423895 18076 ZNF330 ENSG00000109445 0.805016 315 10 0.805138 229 10 0.686153 170 10 0.81181 196 8 0.761546 96 8 0.74119 394 10 0.771637 95 8 0.772314 235 10 0.797023 155 10 0.883704 144 7 0.858851 332 10 0.706515 60 5 0.83059 189 9 0.844615 47 4 0.840940 135 10 0.850000 37 5 0.606960 47 3 0.753149 224 8 0.733384 191 10 0.70336 435 10 0.70350 85 6 0.710363 113 7 0.676088 174 8 0.688259 134 8 0.77654 74 7 0.817616 216 10 0.812396 174 8 0.670779 84 5 0.821620 144 10 0.833416 287 10 0.840552 275 10 0.82580 456 10 0.714498 209 10 0.742814 141 10 0.66846 165 7 0.853490 83 5 0.642654 201 8 0.75764 257 10 0.812682 408 8 0.850882 348 10 0.848680 272 10 0.7434982 154 8 0.711081 448 8 0.752702 0.749584 0.754725 0.776894 0.750041 0.786430 0.759738 0.736961 0.749746 0.814834 0.767161 0.713226 0.781005 0.769433 0.805800 0.822524 0.760729 0.771705 0.797607 0.746931 0.710483 0.703316 0.739083 0.734600 0.70079 0.784828 0.763189 0.759161 0.776916 0.78335 0.814794 0.768059 0.710024 0.7038657 0.67118 0.766325 0.701677 0.7043720 0.766532 0.805749 0.755963 0.734028 0.772489 5 0.795223 0.77843 0.0010654 10 0.73279 0.769849 -0.03705837 0.891922 0.5152621 insignificant 1 1 insignificant 0.768907 0.843142 insignificant 1 1 insignificant 0.0134505 0.5968549 insignificant 1 insignificant 0.795363 0.729167 0.0482916 10 0.726683 0.645572 0.0811111 1.8602e-04 0.911794 weaklyHypermeth 7.4408e-03 1 weaklyHypermeth 2.5527e-02 0.905218 weaklyHypermeth 8.5091e-01 1 insignificant 0.0482681 0.19608238 insignificant 1.000000 insignificant 0.795412 0.811656 -0.00742456 8 0.726683 0.81190 -0.0852172 8.3502e-01 4.8963e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 9.3891e-01 1.2305e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0151702 0.6526199 insignificant 1.00000 insignificant 0.778381 0.729167 0.0491089 10 0.775520 0.645572 0.1299480 3.3500e-04 8.5230e-01 weaklyHypermeth 1.2407e-02 1.0000000 weaklyHypermeth 1.0801e-01 0.643828 insignificant 1.0000e+00 1 insignificant 0.0348176 0.36211940 insignificant 1.000000 insignificant 0.778533 0.811656 -0.0078374 8 0.789805 0.81190 -0.0220945 9.6819e-01 5.2435e-01 insignificant 1.0000e+00 1.00000000 insignificant 9.9767e-01 0.5859792 insignificant 1.0000e+00 1 insignificant -0.0286207 0.4308208 insignificant 1.00000 insignificant 0.728910 0.811425 -0.0633063 8 0.618308 0.797431 -0.17912277 0.845752 2.2268e-05 weaklyHypometh 1 1.8557e-03 weaklyHypometh 0.961166 1.3672e-02 weaklyHypometh 1 6.5103e-01 insignificant -0.06343829 0.1613485 insignificant 1.00000 insignificant chr4 146339095 146340095 18156 OTUD4 ENSG00000164164 0.713010 54 4 0.695522 82 7 0.787698 42 4 0.87750 75 6 0.671032 35 4 0.76012 117 6 0.695238 33 4 0.786409 89 7 0.713235 45 4 0.820833 28 1 0.619572 120 7 0.375000 11 0 0.87333 35 3 0.675000 48 5 0.773674 60 5 1.000000 6 0 0.833333 11 1 0.471123 72 4 0.699093 72 5 0.79630 59 6 0.78125 25 3 0.750000 9 0 0.623214 37 2 0.493939 39 5 0.79918 45 4 0.726099 129 7 0.626190 28 4 0.508333 18 1 0.622159 57 5 0.698427 88 7 0.812479 88 7 0.78017 75 6 0.552853 83 5 0.626190 40 3 0.67638 111 7 0.755556 17 1 0.533482 64 4 0.67928 83 7 0.867347 45 6 0.743056 87 6 0.694826 111 6 0.8000000 13 0 0.771229 114 6 0.654987 0.614924 0.591045 0.820354 0.633723 0.669891 0.716083 0.743077 0.685072 0.814465 0.649156 0.273585 0.860692 0.815094 0.731847 1.000000 0.811321 0.756583 0.779665 0.714326 0.573585 0.603774 0.642453 0.526872 0.61714 0.786164 0.616891 0.704403 0.474057 0.64522 0.687101 0.667660 0.409565 0.7603774 0.71375 0.626415 0.617026 0.6496811 0.798922 0.785115 0.722303 0.801887 0.694757 0 0.723035 0.68025 0.0545290 4 0.71413 0.736039 -0.02190594 0.210722 0.4881940 lowCoverage 1 1 lowCoverage 0.248574 0.860311 lowCoverage 1 1 lowCoverage 0.0467305 0.3005281 lowCoverage 1 lowCoverage 0.722325 0.650754 0.0863297 5 0.703400 0.647288 0.0561113 2.7988e-02 0.960616 weaklyHypermeth 6.3268e-01 1 insignificant 3.7785e-02 0.964366 weaklyHypermeth 1.0000e+00 1 insignificant 0.0945597 0.05988331 lowCoverage 1.000000 lowCoverage 0.722325 0.797297 -0.03439517 4 0.703400 0.76093 -0.0575312 9.8381e-01 7.4650e-02 lowCoverage 1.0000e+00 1.000000 lowCoverage 9.5510e-01 2.4952e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage -0.0434407 0.3210182 lowCoverage 1.00000 lowCoverage 0.678740 0.650754 0.0337496 4 0.703044 0.647288 0.0557555 1.4048e-01 9.2624e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 3.4830e-01 0.898895 lowCoverage 1.0000e+00 1 lowCoverage 0.0478291 0.32466084 lowCoverage 1.000000 lowCoverage 0.678740 0.797297 -0.0920548 4 0.703044 0.76093 -0.0578870 9.7553e-01 4.8272e-02 lowCoverage 1.0000e+00 1.00000000 lowCoverage 9.7521e-01 0.1281671 lowCoverage 1.0000e+00 1 lowCoverage -0.0901713 0.0557565 lowCoverage 1.00000 lowCoverage 0.650754 0.797297 -0.1274053 6 0.647288 0.760931 -0.11364254 0.991951 9.4079e-03 weaklyHypometh 1 3.0348e-01 insignificant 0.986767 3.2231e-02 weaklyHypometh 1 1.0000e+00 insignificant -0.13800038 0.0132008 lowCoverage 0.66004 lowCoverage chr4 146873495 146874495 18160 MMAA ENSG00000151611 0.043009 2218 45 0.097404 1375 49 0.065319 1612 49 0.04487 1609 39 0.057712 1007 49 0.12263 1766 47 0.077019 1563 45 0.059598 1095 44 0.067863 1616 48 0.046468 1701 49 0.078306 1450 50 0.044295 1732 49 0.07741 1292 48 0.052165 305 18 0.057544 1697 50 0.046204 1703 49 0.045692 1570 40 0.079964 1710 40 0.094715 1120 50 0.10239 1596 46 0.10040 530 42 0.071301 1000 38 0.049961 1523 46 0.094143 685 40 0.10788 809 31 0.078011 1542 47 0.073721 1287 45 0.068001 548 42 0.058797 1035 43 0.055239 1674 47 0.063967 1493 49 0.11160 2227 47 0.010699 1118 44 0.021428 1130 48 0.07519 418 28 0.066312 723 35 0.064234 577 40 0.06674 1292 49 0.047827 2951 47 0.037488 1928 47 0.050286 1671 38 0.0079246 1729 37 0.075487 1970 50 0.045448 0.068066 0.047544 0.047175 0.047602 0.053172 0.053034 0.033203 0.049275 0.032123 0.056262 0.029754 0.056632 0.047571 0.042131 0.038586 0.022539 0.029231 0.058886 0.049914 0.073535 0.017714 0.053573 0.072956 0.03819 0.048679 0.038713 0.057196 0.043364 0.04622 0.043398 0.077295 0.004849 0.0046992 0.08786 0.016157 0.032425 0.0067882 0.019165 0.012400 0.015073 0.010753 0.026195 28 0.045406 0.05444 -0.0048182 44 0.09231 0.097016 -0.00470528 0.117169 0.8120792 insignificant 1 1 insignificant 0.087974 0.958991 insignificant 1 1 insignificant -0.0097225 0.2300788 insignificant 1 insignificant 0.045346 0.015215 0.0425511 45 0.080457 0.049158 0.0312987 1.7927e-11 0.994749 weaklyHypermeth 1.6298e-09 1 weaklyHypermeth 4.1086e-07 0.999991 weaklyHypermeth 8.1764e-05 1 weaklyHypermeth 0.0172619 0.20119385 insignificant 1.000000 insignificant 0.042661 0.019709 0.02711167 43 0.073658 0.07733 -0.0036714 4.6180e-07 9.6043e-01 weaklyHypermeth 1.1545e-04 1.000000 weaklyHypermeth 1.8986e-03 9.9759e-01 weaklyHypermeth 3.7972e-01 1.000000 insignificant 0.0242265 0.0923446 insignificant 1.00000 insignificant 0.054397 0.015215 0.0491287 46 0.085393 0.049158 0.0362354 1.1436e-05 9.9812e-01 weaklyHypermeth 6.7271e-04 1.0000000 weaklyHypermeth 9.7784e-04 0.999999 weaklyHypermeth 5.7520e-02 1 weaklyHypermeth 0.0269844 0.06608458 insignificant 1.000000 insignificant 0.053962 0.019709 0.0345787 42 0.068483 0.07733 -0.0088463 6.0579e-03 9.0116e-01 weaklyHypermeth 1.0000e+00 1.00000000 insignificant 7.5654e-02 0.9521237 insignificant 1.0000e+00 1 insignificant 0.0339490 0.0316130 weaklyHypermeth 1.00000 insignificant 0.014297 0.019615 -0.0119836 43 0.034459 0.062755 -0.02829545 0.999668 1.1833e-03 weaklyHypometh 1 5.3786e-02 weaklyHypometh 1.000000 9.9125e-02 insignificant 1 1.0000e+00 insignificant 0.00696463 0.6664116 insignificant 1.00000 insignificant chr4 148738795 148739795 18187 EDNRA ENSG00000151617 0.898975 102 6 0.764466 96 6 0.766408 97 6 0.89269 74 4 0.819974 74 6 0.79308 195 6 0.851024 107 6 0.645125 81 6 0.823250 79 6 0.879167 61 6 0.846078 178 6 0.653061 54 4 0.83634 78 6 0.794872 37 4 0.849305 82 6 0.491715 36 2 0.793841 66 3 0.897728 91 5 0.773178 94 5 0.80545 118 6 0.90625 19 1 0.775000 19 2 0.899561 78 6 0.842708 43 3 0.64286 18 2 0.702192 145 6 0.920142 69 4 0.888889 27 3 0.663020 111 6 0.840043 119 6 0.826299 124 6 0.80010 149 6 0.774573 95 6 0.664502 73 6 0.78349 109 5 0.736111 11 0 0.678493 83 6 0.80204 135 6 0.833333 76 6 0.851140 82 6 0.861111 61 4 0.8474747 38 4 0.895833 68 4 0.890779 0.688642 0.784988 0.860671 0.829817 0.814861 0.869967 0.753931 0.716382 0.848734 0.831938 0.551537 0.823744 0.857901 0.809232 0.462062 0.752064 0.874314 0.757562 0.813809 0.832507 0.831429 0.862958 0.726916 0.72775 0.790282 0.822628 0.899666 0.753562 0.82431 0.779632 0.755423 0.739208 0.6158968 0.74034 0.799578 0.813562 0.7661888 0.877637 0.810343 0.830380 0.885309 0.886076 1 0.822222 0.80347 0.0093652 6 0.81587 0.769765 0.04610965 0.091364 0.5641096 insignificant 1 1 insignificant 0.574531 0.303508 insignificant 1 1 insignificant -0.0151357 0.6725889 lowCoverage 1 lowCoverage 0.822222 0.760870 0.0561301 6 0.815874 0.726474 0.0894001 1.9379e-03 0.969033 weaklyHypermeth 5.6996e-02 1 weaklyHypermeth 1.2871e-01 0.884809 insignificant 1.0000e+00 1 insignificant 0.0539185 0.11533350 lowCoverage 1.000000 lowCoverage 0.822284 0.840000 -0.03579153 5 0.818520 0.85102 -0.0324972 9.7573e-01 4.4892e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 9.9095e-01 1.0818e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.0639918 0.0157052 lowCoverage 1.00000 lowCoverage 0.803474 0.760870 0.0537828 6 0.769765 0.726474 0.0432905 5.0548e-03 9.1718e-01 weaklyHypermeth 1.4442e-01 1.0000000 insignificant 3.0170e-02 0.950174 weaklyHypermeth 9.7322e-01 1 insignificant 0.0690542 0.07527736 lowCoverage 1.000000 lowCoverage 0.804798 0.840000 -0.0487361 5 0.814725 0.85102 -0.0362918 8.3433e-01 9.2981e-03 weaklyHypometh 1.0000e+00 1.00000000 insignificant 9.0254e-01 0.0905763 insignificant 1.0000e+00 1 insignificant -0.0488562 0.1205791 lowCoverage 1.00000 lowCoverage 0.761905 0.840000 -0.1015321 5 0.764220 0.851017 -0.08679736 0.996303 6.7556e-04 weaklyHypometh 1 3.5556e-02 weaklyHypometh 0.997314 6.6062e-03 weaklyHypometh 1 4.7187e-01 insignificant -0.11791031 0.0026204 lowCoverage 0.32755 lowCoverage chr4 152171295 152172295 18236 LRBA ENSG00000198589 0.810964 243 11 0.768845 237 11 0.747446 158 11 0.89335 246 11 0.889881 109 7 0.85372 325 11 0.820779 159 11 0.756444 190 11 0.651488 116 7 0.702796 130 11 0.750913 444 11 0.658214 71 3 0.76561 181 11 0.883902 79 8 0.869732 147 11 0.753848 105 3 0.726054 79 3 0.904249 212 11 0.824059 245 11 0.92813 247 10 0.91429 86 9 0.794084 95 9 0.775513 158 7 0.760318 97 7 0.84444 86 8 0.864054 343 11 0.857608 116 9 0.747650 64 5 0.775940 229 11 0.769966 322 11 0.752742 286 10 0.81602 342 11 0.875414 173 11 0.764271 211 11 0.76068 199 9 0.595238 31 2 0.794162 181 11 0.79465 305 11 0.802560 222 6 0.820363 258 11 0.817316 132 10 0.8794113 133 10 0.865363 281 10 0.816883 0.743573 0.713667 0.869189 0.814068 0.828817 0.793930 0.826201 0.746168 0.712082 0.781845 0.618075 0.827085 0.821386 0.819867 0.719013 0.716779 0.844793 0.808525 0.897716 0.874552 0.749213 0.836908 0.790034 0.82222 0.847997 0.827289 0.728701 0.799800 0.80467 0.857174 0.845948 0.848373 0.7114142 0.76568 0.650575 0.707664 0.8066949 0.807420 0.765600 0.837917 0.876917 0.908983 3 0.830321 0.86100 -0.0172930 11 0.81013 0.808506 0.00162645 0.918756 0.3686874 insignificant 1 1 insignificant 0.971885 0.162609 insignificant 1 1 insignificant -0.0080301 0.7394423 insignificant 1 insignificant 0.830321 0.827116 0.0171768 11 0.810132 0.784558 0.0255744 5.8639e-02 0.718522 insignificant 1.0000e+00 1 insignificant 2.4347e-01 0.854922 insignificant 1.0000e+00 1 insignificant 0.0339512 0.44350101 insignificant 1.000000 insignificant 0.830321 0.871345 -0.03978982 10 0.810132 0.85040 -0.0402696 9.9736e-01 4.4646e-03 weaklyHypometh 1.0000e+00 0.496065 insignificant 9.9846e-01 1.5305e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.0389810 0.1179235 insignificant 1.00000 insignificant 0.860612 0.827273 0.0323682 11 0.757974 0.798023 -0.0400488 1.1612e-01 8.4940e-01 insignificant 1.0000e+00 1.0000000 insignificant 1.7064e-01 0.909468 insignificant 1.0000e+00 1 insignificant 0.0419813 0.33852774 insignificant 1.000000 insignificant 0.860999 0.871345 -0.0170794 10 0.808506 0.85040 -0.0418961 9.7414e-01 2.3606e-01 insignificant 1.0000e+00 1.00000000 insignificant 9.7861e-01 0.3921919 insignificant 1.0000e+00 1 insignificant -0.0309509 0.1732867 insignificant 1.00000 insignificant 0.827116 0.871345 -0.0475660 10 0.784558 0.850402 -0.06584404 0.993976 2.0746e-02 weaklyHypometh 1 5.3195e-01 insignificant 0.998300 8.5604e-02 insignificant 1 1.0000e+00 insignificant -0.07293220 0.1188113 insignificant 1.00000 insignificant chr4 155539895 155540895 18328 DCHS2 ENSG00000197410 0.803853 321 9 0.780254 184 9 0.714683 107 9 0.80379 194 9 0.715450 88 9 0.73462 329 9 0.685981 113 9 0.755810 144 8 0.679971 125 9 0.843338 81 9 0.793034 276 9 0.723748 64 5 0.78610 161 9 0.837302 36 5 0.658333 78 9 0.711728 60 5 0.718091 54 5 0.662612 199 8 0.834564 132 9 0.65362 276 9 0.82803 55 7 0.770062 80 9 0.822520 144 9 0.904167 54 5 0.83074 72 9 0.799605 189 10 0.836580 91 7 0.728175 38 4 0.838705 151 9 0.843214 195 10 0.755586 170 10 0.72785 349 9 0.573918 110 6 0.783955 81 9 0.58337 168 9 0.632222 65 5 0.630342 90 7 0.67071 209 9 0.835850 230 9 0.775522 271 9 0.772988 201 9 0.8830373 190 9 0.832744 221 9 0.808755 0.804644 0.718488 0.844465 0.822349 0.812146 0.712749 0.816003 0.648379 0.852104 0.872588 0.771399 0.842492 0.841671 0.777008 0.737980 0.768188 0.791519 0.856411 0.843304 0.920871 0.784533 0.812744 0.944318 0.80463 0.773651 0.843311 0.835072 0.790404 0.80693 0.765795 0.797016 0.733520 0.7891185 0.74690 0.667121 0.693610 0.7407757 0.856871 0.913819 0.858796 0.901961 0.803615 3 0.794965 0.80730 -0.0051589 9 0.75199 0.849899 -0.09790713 0.964939 0.1485521 insignificant 1 1 insignificant 0.992103 0.214068 insignificant 1 1 insignificant -0.0622582 0.0054414 weaklyHypometh 1 insignificant 0.795033 0.716066 0.0738384 9 0.766581 0.677177 0.0894045 9.5092e-06 0.992525 weaklyHypermeth 4.5282e-04 1 weaklyHypermeth 5.5971e-03 0.992845 weaklyHypermeth 2.5441e-01 1 insignificant 0.0990913 0.02255166 weaklyHypermeth 0.947238 insignificant 0.794744 0.859838 -0.06545079 9 0.729375 0.80448 -0.0751048 9.9712e-01 6.2810e-04 weaklyHypometh 1.0000e+00 0.125621 insignificant 9.9983e-01 9.9422e-04 weaklyHypometh 1.0000e+00 0.331406 insignificant -0.0751842 0.0165160 weaklyHypometh 1.00000 insignificant 0.807305 0.715673 0.0886509 9 0.849899 0.657000 0.1928994 1.9320e-06 9.9999e-01 weaklyHypermeth 1.2880e-04 1.0000000 weaklyHypermeth 6.7125e-04 0.999999 weaklyHypermeth 4.4750e-02 1 weaklyHypermeth 0.1613495 0.00197892 weaklyHypermeth 0.219880 insignificant 0.806818 0.859838 -0.0591205 9 0.815261 0.80448 0.0107810 8.1479e-01 4.0921e-03 weaklyHypometh 1.0000e+00 0.81841948 insignificant 9.6117e-01 0.0670974 insignificant 1.0000e+00 1 insignificant -0.0129260 0.6273651 insignificant 1.00000 insignificant 0.713687 0.859838 -0.1407644 9 0.577846 0.804480 -0.22663367 1.000000 2.0756e-06 weaklyHypometh 1 2.0756e-04 weaklyHypometh 1.000000 1.1086e-04 weaklyHypometh 1 1.8435e-02 weaklyHypometh -0.17427547 0.0014588 weaklyHypometh 0.24181 insignificant chr4 158070495 158071495 18363 ENSG00000221189 0.622806 294 5 0.595209 57 6 0.363426 27 2 0.69662 147 6 0.561111 53 5 0.62997 143 5 0.437500 48 5 0.686772 51 4 0.425641 42 3 0.400000 20 1 0.613552 69 4 0.620000 18 1 0.45328 59 3 0.611905 33 4 0.705556 37 3 0.550000 21 1 NA 0 0 0.667716 232 5 0.687908 41 2 0.69790 107 5 0.66667 18 1 0.400000 9 0 0.594252 134 5 0.540000 18 1 0.48883 64 3 0.603480 65 4 0.924603 33 4 0.502778 30 3 0.500000 49 5 0.533165 71 4 0.656190 36 4 0.80024 93 4 0.602778 59 6 0.699766 68 4 0.58655 52 3 0.666667 6 0 0.658036 52 5 0.63099 80 5 0.685529 215 5 0.645844 242 6 0.678349 227 6 0.6419048 145 5 0.643073 209 6 0.632027 0.648877 0.529167 0.763920 0.590000 0.666800 0.516071 0.670280 0.492308 0.500000 0.633485 0.800000 0.502273 0.600000 0.780000 0.625000 NA 0.713000 0.658824 0.578857 0.700000 0.400000 0.606017 0.610000 0.67989 0.617033 0.892857 0.579167 0.550000 0.50944 0.594286 0.725362 0.610000 0.6721978 0.67982 0.722452 0.648750 0.5455882 0.746169 0.720438 0.733157 0.762857 0.707156 0 0.557038 0.53387 0.0136936 5 0.61397 0.609311 0.00465644 0.566475 0.7644783 insignificant 1 1 insignificant 0.753309 0.169577 insignificant 1 1 insignificant -0.0204881 0.6815430 lowCoverage 1 lowCoverage 0.557038 0.580442 0.0280064 5 0.613967 0.592419 0.0215481 1.8530e-01 0.378765 insignificant 1.0000e+00 1 insignificant 9.2198e-01 0.278430 insignificant 1.0000e+00 1 insignificant -0.0604349 0.06277275 lowCoverage 1.000000 lowCoverage 0.557038 0.585742 -0.06074590 5 0.613967 0.66264 -0.0486711 9.6645e-01 5.9050e-02 insignificant 1.0000e+00 1.000000 insignificant 9.6617e-01 4.7688e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.0785776 0.0087427 lowCoverage 0.86378 lowCoverage 0.533871 0.580442 0.0104708 5 0.609311 0.592419 0.0168917 3.4140e-01 6.6275e-01 insignificant 1.0000e+00 1.0000000 insignificant 6.4149e-01 0.412207 insignificant 1.0000e+00 1 insignificant -0.0399468 0.39379425 lowCoverage 1.000000 lowCoverage 0.533871 0.585742 -0.0731879 5 0.609311 0.66264 -0.0533275 9.5029e-01 6.6219e-02 insignificant 1.0000e+00 1.00000000 insignificant 7.5703e-01 0.2991855 insignificant 1.0000e+00 1 insignificant -0.0580895 0.2021841 lowCoverage 1.00000 lowCoverage 0.580442 0.585742 -0.0933471 5 0.592419 0.662638 -0.07021920 0.859551 2.9694e-02 weaklyHypometh 1 6.9056e-01 insignificant 0.722558 3.7963e-01 insignificant 1 1.0000e+00 insignificant -0.01814269 0.3849849 lowCoverage 1.00000 lowCoverage chr4 169696395 169697395 18534 PALLD ENSG00000129116 0.836027 125 6 0.747044 114 6 0.744048 47 6 0.78073 77 2 0.809524 34 6 0.71250 36 2 0.780983 41 2 0.692565 102 6 0.734259 39 6 0.496212 52 4 0.664214 151 6 0.750000 28 2 0.86177 85 6 0.800000 40 6 0.863889 66 6 0.550000 27 2 1.000000 2 0 0.725694 86 2 0.615124 53 6 0.71474 25 2 0.85714 14 0 1.000000 12 0 0.823031 59 6 0.916667 21 2 0.81830 63 6 0.616667 87 6 0.638889 24 3 0.666667 12 2 0.695419 73 6 0.826068 72 6 0.612073 56 6 0.48148 19 2 0.690929 103 6 0.694444 72 6 0.63528 72 6 0.916667 8 0 0.793910 47 4 0.68803 112 6 0.558333 79 2 0.763210 112 6 0.790883 139 6 0.7638889 64 2 0.732540 80 6 0.839549 0.712959 0.664835 0.729580 0.879670 0.726865 0.730153 0.708962 0.773291 0.569930 0.686647 0.788462 0.738130 0.726923 0.838141 0.754808 0.938901 0.693910 0.749833 0.719473 0.615385 1.000000 0.719014 0.807692 0.78468 0.588801 0.612179 0.688154 0.715924 0.80190 0.717727 0.730889 0.641460 0.7435897 0.66009 0.807692 0.731139 0.7057199 0.685897 0.748433 0.748191 0.690705 0.828297 0 0.742251 0.74023 0.0095816 6 0.62310 0.778027 -0.15492249 0.749415 0.8915752 insignificant 1 1 insignificant 0.955445 0.377812 insignificant 1 1 insignificant -0.0020676 0.9675435 lowCoverage 1 lowCoverage 0.743863 0.688406 0.0565048 6 0.747473 0.687291 0.0601820 1.1568e-02 0.990548 weaklyHypermeth 2.8919e-01 1 insignificant 1.4628e-01 0.952693 insignificant 1.0000e+00 1 insignificant 0.0074222 0.88219396 lowCoverage 1.000000 lowCoverage 0.742647 0.742616 -0.00082538 6 0.640691 0.64171 -0.0010220 7.1790e-01 7.1501e-01 insignificant 1.0000e+00 1.000000 insignificant 3.1251e-01 7.9808e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0221956 0.6628579 lowCoverage 1.00000 lowCoverage 0.737575 0.688406 0.0459451 6 0.731814 0.687291 0.0445231 1.0984e-01 9.4769e-01 insignificant 1.0000e+00 1.0000000 insignificant 2.4642e-01 0.985280 insignificant 1.0000e+00 1 insignificant 0.0094897 0.87694716 lowCoverage 1.000000 lowCoverage 0.739130 0.742616 -0.0060926 6 0.770126 0.64171 0.1284132 8.2194e-01 4.3188e-01 insignificant 1.0000e+00 1.00000000 insignificant 2.0091e-01 0.9524097 insignificant 1.0000e+00 1 insignificant 0.0242631 0.6944749 lowCoverage 1.00000 lowCoverage 0.688406 0.744186 -0.0585787 6 0.687291 0.748665 -0.06137429 0.849346 7.1777e-03 weaklyHypometh 1 2.5635e-01 insignificant 0.476713 3.1675e-01 insignificant 1 1.0000e+00 insignificant 0.01477341 0.8083432 lowCoverage 1.00000 lowCoverage chr4 170236595 170237595 18579 CBR4 ENSG00000145439 0.886792 189 5 0.906139 126 5 0.800000 42 5 0.96485 176 5 0.983333 44 5 0.93572 172 5 0.860000 38 3 0.761029 68 5 1.000000 29 3 0.900000 10 0 0.912809 150 5 0.600000 13 0 1.00000 27 5 0.986111 40 3 0.853333 28 5 NA 0 0 NA 0 0 0.829710 186 5 0.600000 113 3 0.94373 141 5 0.80000 14 0 0.833333 13 0 0.980476 68 3 1.000000 22 3 0.77180 123 5 0.994444 130 5 0.946429 37 5 0.750000 18 0 0.990909 78 5 0.977425 141 5 0.947506 156 5 0.98750 112 5 1.000000 101 5 0.986207 96 5 1.00000 102 5 0.666667 15 3 0.943421 89 5 0.97202 171 5 0.995455 136 3 0.961300 133 5 0.970952 142 5 0.7913043 71 3 0.982609 135 5 0.927486 0.885939 0.912281 0.965512 0.992690 0.953420 0.901754 0.950593 1.000000 0.868421 0.937081 0.824561 1.000000 0.978070 0.874269 NA NA 0.962624 0.824561 0.953185 0.991486 0.862573 0.973475 1.000000 0.95178 0.992690 0.952381 0.868421 0.988038 0.96288 0.954460 0.983553 1.000000 0.9806413 1.00000 0.731725 0.953404 0.9619969 0.993620 0.973254 0.959670 0.900076 0.992372 0 0.944025 0.95833 -0.0232087 5 0.86626 0.829880 0.03638319 0.918650 0.0966220 insignificant 1 1 insignificant 0.926392 0.215356 insignificant 1 1 insignificant -0.0414539 0.3069901 lowCoverage 1 lowCoverage 0.944025 0.970383 -0.0267259 5 0.820481 0.982623 -0.1621418 9.9977e-01 0.262758 insignificant 1.0000e+00 1 insignificant 9.9892e-01 0.346433 insignificant 1.0000e+00 1 insignificant -0.0545216 0.39078782 lowCoverage 1.000000 lowCoverage 0.944549 0.977310 -0.03264657 5 0.912769 0.96972 -0.0569467 9.9592e-01 5.9994e-02 insignificant 1.0000e+00 1.000000 insignificant 8.9835e-01 2.4516e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0667930 0.1903016 lowCoverage 1.00000 lowCoverage 0.965746 0.970280 -0.0048234 5 0.968194 0.976830 -0.0086361 8.5263e-01 6.0023e-01 insignificant 1.0000e+00 1.0000000 insignificant 8.5342e-01 0.650750 insignificant 1.0000e+00 1 insignificant -0.0130677 0.83274872 lowCoverage 1.000000 lowCoverage 0.965670 0.977310 -0.0097476 5 0.961833 0.96972 -0.0078831 7.2521e-01 4.1968e-01 insignificant 1.0000e+00 1.00000000 insignificant 5.1290e-01 0.4067858 insignificant 1.0000e+00 1 insignificant -0.0253390 0.6024151 lowCoverage 1.00000 lowCoverage 0.970228 0.977310 -0.0067062 5 0.972196 0.969716 0.00248026 0.421147 8.2576e-01 insignificant 1 1.0000e+00 insignificant 0.435789 7.5803e-01 insignificant 1 1.0000e+00 insignificant -0.01227134 0.8546958 lowCoverage 1.00000 lowCoverage chr4 170237795 170238795 18580 CBR4 ENSG00000145439 0.916818 261 5 0.881947 253 5 0.583333 53 5 0.84765 260 5 0.516667 17 1 0.92534 333 5 0.570887 45 5 0.763772 118 6 0.803571 46 5 0.968254 47 5 0.897437 281 6 0.333333 3 0 0.90833 69 5 0.769312 40 5 0.985714 26 1 0.000000 7 1 NA 0 0 0.662258 398 5 0.945183 130 5 0.90079 186 6 0.66136 89 6 1.000000 10 1 0.907861 114 5 0.942857 51 5 0.85199 63 5 0.944833 372 5 0.757900 62 5 0.666667 10 1 0.899111 245 5 0.960725 420 5 0.934784 471 5 0.93703 269 5 0.504354 157 5 0.187624 116 5 0.29910 441 4 0.500000 12 0 0.324261 174 5 0.66488 360 5 0.720418 87 5 0.535927 243 5 0.607961 197 5 0.4052381 132 5 0.503708 211 6 0.852867 0.887368 0.551282 0.823537 0.566667 0.896701 0.314491 0.818418 0.721612 0.954416 0.831361 NA 0.896154 0.814164 0.952381 NA NA 0.562766 0.868643 0.864774 0.752836 0.986424 0.876741 0.809524 0.72498 0.911526 0.815254 NA 0.839152 0.93286 0.889416 0.897201 0.201490 0.1332799 0.14022 0.147615 0.098932 0.3388375 0.750370 0.493051 0.534986 0.346947 0.502486 1 0.825681 0.91360 -0.0822616 5 0.75583 0.794830 -0.03900369 0.998949 0.0111187 weaklyHypometh 1 1 insignificant 0.999994 0.058007 insignificant 1 1 insignificant -0.1257465 0.0711917 lowCoverage 1 lowCoverage 0.825867 0.386508 0.4632935 5 0.841101 0.436974 0.4041277 2.6893e-20 0.999940 hypermethylated 8.9644e-18 1 hypermethylated 1.2446e-07 0.999433 hypermethylated 4.1488e-05 1 hypermethylated 0.3329776 0.00327511 lowCoverage 0.297737 lowCoverage 0.825545 0.521839 0.29874155 5 0.720944 0.48073 0.2402112 2.7409e-13 1.0000e+00 hypermethylated 1.3704e-10 1.000000 hypermethylated 2.9958e-06 1.0000e+00 hypermethylated 1.4979e-03 1.000000 hypermethylated 0.1916969 0.0276856 lowCoverage 1.00000 lowCoverage 0.913904 0.386508 0.5176687 5 0.893106 0.436974 0.4561326 5.6287e-24 9.9996e-01 hypermethylated 5.6287e-21 1.0000000 hypermethylated 1.8907e-07 0.999988 hypermethylated 9.4533e-05 1 hypermethylated 0.4587241 0.00054609 lowCoverage 0.091014 lowCoverage 0.913484 0.521839 0.3838556 5 0.765520 0.48073 0.2847868 1.9565e-21 1.0000e+00 hypermethylated 1.9565e-18 1.00000000 hypermethylated 8.0136e-08 1.0000000 hypermethylated 4.0068e-05 1 hypermethylated 0.3174434 0.0012021 lowCoverage 0.60103 lowCoverage 0.386508 0.522440 -0.1658372 5 0.436974 0.560855 -0.12388135 0.695141 3.1788e-04 weaklyHypometh 1 1.9867e-02 weaklyHypometh 0.912774 1.0655e-02 weaklyHypometh 1 5.3275e-01 insignificant -0.14128075 0.1454980 lowCoverage 1.00000 lowCoverage chr4 170932095 170933095 18605 C4orf27 ENSG00000056050 0.700815 860 13 0.412510 313 13 0.755302 326 14 0.73065 709 13 0.780687 255 14 0.41987 665 14 0.472386 351 14 0.719251 316 14 0.544160 246 14 0.644545 418 14 0.379233 479 14 0.330404 362 14 0.86981 390 14 0.731402 260 14 0.699391 482 14 0.335386 204 10 1.000000 573 6 0.551866 1387 14 0.885129 444 14 0.85822 532 14 0.41662 120 11 0.466046 548 14 0.449138 406 14 0.271465 263 11 0.85048 541 13 0.922175 357 14 0.541839 426 14 0.715763 141 10 0.681483 289 13 0.924108 268 11 0.871051 232 10 0.27968 531 13 0.223003 299 14 0.523602 477 14 0.17995 513 13 0.314141 70 8 0.331145 290 15 0.29666 510 14 0.736462 755 13 0.455399 649 14 0.914337 702 13 0.6657193 937 13 0.731040 557 14 0.661874 0.413008 0.753486 0.673961 0.787583 0.362451 0.436508 0.711836 0.507828 0.561805 0.424050 0.342668 0.846002 0.666919 0.709950 0.386597 0.804367 0.576100 0.927871 0.943835 0.558201 0.403782 0.410575 0.361500 0.89499 0.943175 0.573476 0.802670 0.701101 0.95048 0.926240 0.249012 0.269261 0.5579289 0.26523 0.313663 0.388444 0.2476062 0.728579 0.432311 0.920421 0.665962 0.686276 10 0.637608 0.60579 0.0042334 14 0.60356 0.515255 0.08830616 0.243965 0.9497290 insignificant 1 1 insignificant 0.913178 0.766035 insignificant 1 1 insignificant 0.0252306 0.7647277 insignificant 1 insignificant 0.637551 0.299304 0.3085095 14 0.613552 0.273005 0.3405466 1.1085e-19 1.000000 hypermethylated 2.7711e-17 1 hypermethylated 1.3084e-12 1.000000 hypermethylated 1.3084e-09 1 hypermethylated 0.3296332 0.00018213 hypermethylated 0.030355 hypermethylated 0.637762 0.648889 -0.04287220 13 0.611141 0.71373 -0.1025873 9.9991e-01 5.7131e-01 insignificant 1.0000e+00 1.000000 insignificant 9.9999e-01 3.7401e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0595405 0.5117878 insignificant 1.00000 insignificant 0.605596 0.299490 0.3015591 14 0.520929 0.282463 0.2384654 3.4060e-10 1.0000e+00 hypermethylated 3.4060e-08 1.0000000 hypermethylated 1.8448e-08 1.000000 hypermethylated 1.8448e-05 1 hypermethylated 0.3044026 0.00257716 weaklyHypermeth 0.257716 insignificant 0.607230 0.648889 -0.0489934 13 0.563717 0.71373 -0.1500120 9.9822e-01 1.1585e-01 insignificant 1.0000e+00 1.00000000 insignificant 9.9567e-01 0.4814613 insignificant 1.0000e+00 1 insignificant -0.0847711 0.4230051 insignificant 1.00000 insignificant 0.300233 0.649069 -0.3639637 13 0.293284 0.753380 -0.46009621 1.000000 1.4764e-12 hypomethylated 1 7.3819e-10 hypomethylated 1.000000 6.5976e-10 hypomethylated 1 6.5976e-07 hypomethylated -0.38917369 0.0030109 weaklyHypometh 0.33455 insignificant chr4 175472695 175473695 18717 KIAA1712 ENSG00000164118 0.843667 204 6 0.736321 135 6 0.771709 111 6 0.80676 126 6 0.729762 75 6 0.79556 240 6 0.723900 148 6 0.789736 102 6 0.748384 109 6 0.781976 120 6 0.806758 200 6 0.829147 90 6 0.79478 134 6 NA 0 0 0.842923 154 6 0.777315 48 6 0.647547 76 6 0.810013 134 6 0.761702 123 6 0.81679 213 6 0.91506 61 6 0.867641 60 6 0.759734 191 6 0.717211 70 6 0.83750 48 6 0.809287 178 6 0.794203 94 6 0.845976 64 6 0.801123 121 6 0.802456 171 6 0.820718 161 6 0.79623 318 6 0.717886 108 6 0.694044 110 6 0.55998 140 6 0.686563 65 6 0.797130 92 6 0.73725 205 6 0.817312 273 6 0.853419 247 6 0.835741 202 6 0.8789343 256 6 0.819188 234 6 0.845462 0.741332 0.778168 0.807224 0.736577 0.803958 0.728989 0.788477 0.747908 0.785781 0.813841 0.829689 0.797995 NA 0.848096 0.788357 0.664216 0.814157 0.760624 0.821542 0.913361 0.868715 0.762970 0.735413 0.83580 0.813474 0.797775 0.849772 0.809575 0.80521 0.830523 0.803775 0.718645 0.6926615 0.55174 0.693563 0.796825 0.7407095 0.823274 0.856091 0.841805 0.878997 0.817103 6 0.782848 0.79506 -0.0163465 6 0.78560 0.801278 -0.01567584 0.971033 0.2391155 insignificant 1 1 insignificant 0.992704 0.034852 weaklyHypometh 1 1 insignificant -0.0342050 0.0738747 insignificant 1 insignificant 0.782848 0.691667 0.0846905 6 0.785602 0.696811 0.0887906 7.0062e-06 0.999961 weaklyHypermeth 3.5031e-04 1 weaklyHypermeth 3.5835e-04 0.998213 weaklyHypermeth 2.3890e-02 1 weaklyHypermeth 0.0809153 0.05307891 insignificant 1.000000 insignificant 0.782848 0.851485 -0.05956033 6 0.785602 0.84494 -0.0593338 9.9993e-01 3.3890e-03 weaklyHypometh 1.0000e+00 0.423631 insignificant 9.9995e-01 3.9152e-03 weaklyHypometh 1.0000e+00 0.559308 insignificant -0.0611954 0.0022355 weaklyHypometh 0.37258 insignificant 0.795055 0.691667 0.1007060 6 0.801278 0.696811 0.1044665 7.9020e-07 1.0000e+00 weaklyHypermeth 5.6488e-05 1.0000000 weaklyHypermeth 8.6534e-06 0.999997 weaklyHypermeth 1.0817e-03 1 weaklyHypermeth 0.1151203 0.01343560 weaklyHypermeth 0.671780 insignificant 0.795055 0.851485 -0.0433138 6 0.801278 0.84494 -0.0436579 9.9766e-01 3.2036e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant 9.5334e-01 0.2808398 insignificant 1.0000e+00 1 insignificant -0.0269904 0.1684703 insignificant 1.00000 insignificant 0.691667 0.851485 -0.1447388 6 0.696811 0.844936 -0.14812442 1.000000 2.9979e-06 weaklyHypometh 1 2.7254e-04 weaklyHypometh 1.000000 4.2105e-06 weaklyHypometh 1 1.4035e-03 weaklyHypometh -0.14211067 0.0054282 weaklyHypometh 0.45904 insignificant chr4 175565895 175566895 18727 KIAA1712 ENSG00000164118 0.803861 216 6 0.704688 63 6 0.769907 69 4 0.63689 190 7 0.818452 54 4 0.74517 107 7 0.876124 51 4 0.797917 55 5 0.727879 49 4 0.650000 32 3 0.824078 106 7 0.657143 20 3 0.86508 44 5 0.642857 13 0 0.850000 54 5 0.908333 22 2 0.666667 3 0 0.642282 116 6 0.757407 24 1 0.72125 61 6 0.76531 20 2 0.833333 10 0 0.708529 79 4 0.705357 37 4 0.90000 21 3 0.698052 40 3 0.793320 61 5 0.933333 13 0 0.716667 26 3 0.726531 54 6 0.920635 42 5 0.82390 97 7 0.691156 47 7 0.730368 81 7 0.84226 75 6 1.000000 6 1 0.720106 71 6 0.80952 32 4 0.805603 244 5 0.831531 225 7 0.806452 265 7 0.6858466 85 4 0.856164 170 7 0.779473 0.860156 0.644531 0.733823 0.740575 0.761204 0.729021 0.776042 0.690593 0.822917 0.682477 0.833333 0.831914 0.531250 0.835417 0.887500 0.645559 0.641968 0.578125 0.771645 0.794385 0.783012 0.722488 0.784226 0.80385 0.737216 0.932498 0.882457 0.614583 0.54762 0.891204 0.842786 0.574405 0.6775402 0.82788 NA 0.641964 0.6696429 0.750718 0.746143 0.782449 0.684152 0.747538 0 0.741405 0.80000 -0.0375741 5 0.68364 0.802616 -0.11897617 0.977708 0.1669013 insignificant 1 1 insignificant 0.982394 0.578416 insignificant 1 1 insignificant -0.0404479 0.2186861 lowCoverage 1 lowCoverage 0.741766 0.733974 0.0144586 4 0.702004 0.810609 -0.1086051 4.2525e-01 0.167698 lowCoverage 1.0000e+00 1 lowCoverage 4.1182e-01 0.711732 lowCoverage 1.0000e+00 1 lowCoverage -0.0456037 0.39670971 lowCoverage 1.000000 lowCoverage 0.742390 0.724975 -0.01770469 4 0.732310 0.85509 -0.1227779 9.9672e-01 1.2651e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 8.7531e-01 4.0825e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage -0.0438205 0.2488157 lowCoverage 1.00000 lowCoverage 0.801205 0.733974 0.0737885 3 0.832877 0.810609 0.0222687 1.9058e-01 9.7270e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 3.2045e-01 0.996624 lowCoverage 1.0000e+00 1 lowCoverage -0.0051558 0.92485615 lowCoverage 1.000000 lowCoverage 0.801205 0.723296 0.0104087 3 0.832877 0.81161 0.0212625 5.7577e-01 4.3556e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 6.0881e-01 0.6381777 lowCoverage 1.0000e+00 1 lowCoverage -0.0033726 0.9323774 lowCoverage 1.00000 lowCoverage 0.733974 0.723296 -0.0341851 5 0.810609 0.811615 -0.00100617 0.258714 7.8498e-02 insignificant 1 1.0000e+00 insignificant 0.330504 2.9555e-01 insignificant 1 1.0000e+00 insignificant 0.00178318 0.9749176 insignificant 1.00000 insignificant chr4 175641295 175642295 18733 KIAA1712 ENSG00000164118 0.775847 367 10 0.711511 273 10 0.704065 254 10 0.69584 237 10 0.767157 121 10 0.72678 390 10 0.782028 179 10 0.748756 241 10 0.828266 144 10 0.693659 175 10 0.806013 299 10 0.772728 110 8 0.72759 234 10 0.858889 53 5 0.834279 192 10 0.607602 108 9 0.647720 102 6 0.785555 273 10 0.872329 297 10 0.75669 305 10 0.73384 43 3 0.692038 88 8 0.868934 161 10 0.826185 138 7 0.83762 122 10 0.868803 237 10 0.723014 101 5 0.842975 106 9 0.837496 241 10 0.773692 313 10 0.824014 295 10 0.80190 479 10 0.665463 206 10 0.711013 153 10 0.78307 286 10 0.752727 49 6 0.613488 152 7 0.76659 258 10 0.714348 438 10 0.826835 292 10 0.673346 307 10 0.8593767 314 10 0.733920 378 10 0.845082 0.818370 0.790384 0.798071 0.784690 0.853933 0.874480 0.810273 0.848431 0.843904 0.844117 0.831222 0.819243 0.847404 0.873610 0.726736 0.756126 0.842067 0.908665 0.847448 0.781821 0.742906 0.877245 0.843426 0.89026 0.875329 0.812498 0.864213 0.891280 0.84967 0.868906 0.846031 0.731122 0.7781607 0.82258 0.748038 0.700711 0.8264466 0.850780 0.891417 0.823563 0.876577 0.815941 5 0.814883 0.84440 -0.0299876 10 0.70843 0.781038 -0.07260359 0.998180 0.0069032 weaklyHypometh 1 1 insignificant 0.992956 0.023689 weaklyHypometh 1 1 insignificant -0.0473770 0.0475955 weaklyHypometh 1 insignificant 0.814883 0.773551 0.0409829 10 0.708435 0.752905 -0.0444707 2.6785e-04 0.872703 weaklyHypermeth 9.7253e-03 1 weaklyHypermeth 3.5928e-02 0.967750 weaklyHypermeth 1.0000e+00 1 insignificant 0.0397734 0.23034266 insignificant 1.000000 insignificant 0.814883 0.787616 -0.01028472 10 0.708435 0.75244 -0.0440083 8.9219e-01 9.5213e-02 insignificant 1.0000e+00 1.000000 insignificant 9.0415e-01 1.4442e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0063993 0.8729417 insignificant 1.00000 insignificant 0.844397 0.773551 0.0690667 10 0.781038 0.752905 0.0281329 6.4081e-05 9.9994e-01 weaklyHypermeth 2.8384e-03 1.0000000 weaklyHypermeth 1.1484e-02 0.999912 weaklyHypermeth 4.2532e-01 1 insignificant 0.0871504 0.02213358 weaklyHypermeth 0.851292 insignificant 0.844664 0.787739 0.0174348 10 0.796678 0.77013 0.0265527 3.0258e-01 8.0091e-01 insignificant 1.0000e+00 1.00000000 insignificant 3.9103e-01 0.8212139 insignificant 1.0000e+00 1 insignificant 0.0409777 0.3336015 insignificant 1.00000 insignificant 0.773551 0.787616 -0.0542467 10 0.752905 0.752443 0.00046232 0.979141 1.4886e-03 weaklyHypometh 1 6.4720e-02 weaklyHypometh 0.998385 9.2397e-03 weaklyHypometh 1 4.8630e-01 insignificant -0.04617276 0.3263631 insignificant 1.00000 insignificant chr4 184128195 184129195 18824 DCTD ENSG00000129187 0.890937 258 7 0.789490 107 7 0.855556 98 7 0.86185 95 7 0.914683 60 7 0.84977 281 7 0.811617 117 7 0.797547 52 6 0.880602 76 7 0.918332 85 7 0.830395 172 7 0.855782 95 7 0.76896 82 7 NA 0 0 0.806973 106 7 0.910714 51 7 0.772421 81 7 0.895942 134 7 0.866823 145 7 0.86371 202 7 0.74830 28 3 0.863717 87 7 0.853210 170 7 0.738095 28 3 0.82143 25 0 0.779579 106 7 0.777577 66 6 0.857143 40 4 0.782575 51 3 0.833179 106 7 0.865497 103 7 0.85427 245 7 0.764926 97 7 0.740363 108 7 0.83762 127 7 0.873312 78 7 0.725964 45 6 0.77838 134 7 0.851352 225 7 0.867951 187 7 0.837044 188 7 0.8637967 293 7 0.888462 222 7 0.878889 0.803964 0.817814 0.853112 0.899155 0.818276 0.787240 0.824012 0.852941 0.929991 0.800015 0.870238 0.807302 NA 0.801656 0.875000 0.784707 0.860820 0.851731 0.821142 0.760481 0.869229 0.857270 0.724638 0.76857 0.802564 0.773147 0.826087 0.789955 0.84707 0.868540 0.825308 0.755082 0.6763285 0.81137 0.841245 0.739044 0.7610846 0.827959 0.870674 0.844884 0.862681 0.882179 3 0.845451 0.83412 0.0080249 7 0.84889 0.836555 0.01233741 0.274353 0.7776010 insignificant 1 1 insignificant 0.367590 0.912171 insignificant 1 1 insignificant 0.0350378 0.0550965 insignificant 1 insignificant 0.845451 0.780985 0.0640734 7 0.848893 0.787342 0.0615511 3.1824e-04 0.996432 weaklyHypermeth 1.0755e-02 1 weaklyHypermeth 5.5433e-03 0.997906 weaklyHypermeth 2.5441e-01 1 insignificant 0.0628235 0.04395986 weaklyHypermeth 1.000000 insignificant 0.845451 0.867265 -0.01552035 7 0.848893 0.86108 -0.0121857 7.1951e-01 1.6584e-01 insignificant 1.0000e+00 1.000000 insignificant 3.6588e-01 4.7131e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0121359 0.3938064 insignificant 1.00000 insignificant 0.834123 0.780985 0.0574456 7 0.836555 0.787342 0.0492137 1.0357e-02 9.2908e-01 weaklyHypermeth 2.5892e-01 1.0000000 insignificant 1.6655e-01 0.962063 insignificant 1.0000e+00 1 insignificant 0.0277858 0.33290097 insignificant 1.000000 insignificant 0.834123 0.867265 -0.0262422 7 0.836555 0.86108 -0.0245231 8.6741e-01 1.3968e-01 insignificant 1.0000e+00 1.00000000 insignificant 7.9034e-01 0.3037820 insignificant 1.0000e+00 1 insignificant -0.0471736 0.0100573 weaklyHypometh 1.00000 insignificant 0.780985 0.867265 -0.0800247 7 0.787342 0.861078 -0.07373679 0.994319 2.9294e-03 weaklyHypometh 1 1.1983e-01 insignificant 0.997529 8.3647e-03 weaklyHypometh 1 4.8630e-01 insignificant -0.07495940 0.0225581 weaklyHypometh 1.00000 insignificant chr4 184552395 184553395 18848 ENSG00000219943 0.926136 221 6 0.911454 307 6 0.708842 153 5 0.91429 201 6 0.938249 99 5 0.89225 322 7 0.912605 127 4 0.928211 135 5 0.843609 89 4 0.837087 82 4 0.927085 303 7 1.000000 53 3 0.85797 91 4 0.838974 84 3 0.878270 176 4 0.685128 39 3 0.000000 2 0 0.933636 219 5 0.916008 219 4 0.93643 263 5 0.90758 68 4 0.908532 76 5 0.791907 129 5 0.858666 95 4 0.91700 68 4 0.942726 330 6 0.956890 105 6 0.744626 73 4 0.957837 227 5 0.958298 368 7 0.938253 416 6 0.92230 299 7 0.809614 207 6 0.959584 191 5 0.78929 220 6 0.958333 14 2 0.706315 166 6 0.98231 356 5 0.947164 209 7 0.903769 241 7 0.900693 144 6 0.9143928 124 3 0.917029 191 7 0.908066 0.905883 0.918933 0.892837 0.945809 0.945132 0.873705 0.964614 0.858364 0.941645 0.939435 1.000000 0.892608 0.928052 0.948014 0.681854 NA 0.921775 0.939785 0.932087 0.952033 0.873784 0.978048 0.892817 0.87025 0.943591 0.930754 0.947692 0.956108 0.93530 0.931968 0.923309 0.875698 0.9619245 0.74457 0.897822 0.863635 0.9689564 0.921801 0.911091 0.898749 0.910433 0.956020 2 0.903580 0.92181 -0.0183774 5 0.79474 0.873924 -0.07918042 0.987297 0.1099973 insignificant 1 1 insignificant 0.967670 0.397133 insignificant 1 1 insignificant -0.0610731 0.2445883 lowCoverage 1 lowCoverage 0.903864 0.860364 0.0469499 5 0.908279 0.850793 0.0574852 6.1573e-02 0.173137 insignificant 1.0000e+00 1 insignificant 8.6840e-01 0.366700 insignificant 1.0000e+00 1 insignificant -0.0282626 0.67615953 lowCoverage 1.000000 lowCoverage 0.903864 0.893289 0.01844656 4 0.908279 0.91727 -0.0089891 3.7925e-01 2.3467e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 4.8452e-01 4.5100e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage -0.0772982 0.1227915 lowCoverage 1.00000 lowCoverage 0.922188 0.860364 0.0628004 6 0.927342 0.850793 0.0765486 5.4233e-02 5.1799e-01 insignificant 1.0000e+00 1.0000000 insignificant 6.7537e-01 0.474257 insignificant 1.0000e+00 1 insignificant 0.0328105 0.53858071 insignificant 1.000000 insignificant 0.922188 0.893289 0.0352694 5 0.927342 0.91727 0.0100743 4.2664e-02 5.4679e-01 weaklyHypermeth 1.0000e+00 1.00000000 insignificant 2.5045e-01 0.6155107 insignificant 1.0000e+00 1 insignificant -0.0162251 0.4617341 insignificant 1.00000 insignificant 0.860364 0.893289 -0.0299821 5 0.850793 0.917268 -0.06647429 0.620554 3.6885e-01 insignificant 1 1.0000e+00 insignificant 0.648988 7.6673e-01 insignificant 1 1.0000e+00 insignificant -0.04903555 0.3456746 insignificant 1.00000 insignificant chr4 184691595 184692595 18855 ING2 ENSG00000168556 0.686781 570 17 0.580364 406 19 0.546185 369 20 0.65339 335 18 0.510625 197 15 0.58764 590 24 0.550439 258 19 0.583194 273 18 0.644909 282 20 0.662361 287 18 0.630354 745 24 0.572698 232 17 0.67445 361 20 0.567347 46 5 0.593867 250 16 0.469148 220 18 0.404187 225 16 0.526391 264 15 0.558174 404 18 0.68798 567 22 0.56043 184 17 0.440503 185 15 0.585508 336 22 0.585541 239 20 0.72961 159 11 0.589359 407 20 0.678648 250 18 0.636439 155 14 0.556738 300 18 0.638097 408 21 0.533310 424 22 0.59597 735 26 0.451897 396 20 0.332814 395 19 0.44599 377 12 0.531702 103 11 0.552666 284 20 0.42023 508 20 0.610885 477 22 0.733276 524 21 0.557628 358 15 0.6905615 386 18 0.691438 539 20 0.713176 0.589923 0.608821 0.750047 0.622878 0.647535 0.683728 0.610830 0.691556 0.744567 0.724221 0.608503 0.707306 0.688356 0.673691 0.523128 0.493848 0.626310 0.619526 0.739755 0.558557 0.559410 0.635624 0.682633 0.73073 0.709680 0.669768 0.756876 0.671009 0.74470 0.657896 0.697715 0.545892 0.4632789 0.53395 0.576586 0.603539 0.5131575 0.679721 0.759533 0.698994 0.757748 0.679652 7 0.643366 0.65336 -0.0127954 18 0.57587 0.577905 -0.00203263 0.696849 0.1462454 insignificant 1 1 insignificant 0.768371 0.432535 insignificant 1 1 insignificant -0.0096543 0.7228229 insignificant 1 insignificant 0.643366 0.500727 0.1629232 20 0.575873 0.426559 0.1493139 1.9142e-18 0.999912 weaklyHypermeth 3.1903e-16 1 weaklyHypermeth 9.1420e-09 0.999989 weaklyHypermeth 4.5710e-06 1 weaklyHypermeth 0.1286411 0.00807024 weaklyHypermeth 0.457468 insignificant 0.643366 0.655867 -0.05432915 19 0.575873 0.66109 -0.0852204 9.9995e-01 1.8554e-05 weaklyHypometh 1.0000e+00 0.009277 weaklyHypometh 9.9987e-01 7.6364e-05 weaklyHypometh 1.0000e+00 0.038182 weaklyHypometh -0.0722329 0.0873187 insignificant 1.00000 insignificant 0.653358 0.500727 0.1493884 18 0.577905 0.426559 0.1513465 2.2519e-16 1.0000e+00 weaklyHypermeth 5.6299e-14 1.0000000 weaklyHypermeth 5.0789e-07 0.999997 weaklyHypermeth 1.6930e-04 1 weaklyHypermeth 0.1382954 0.00566399 weaklyHypermeth 0.395422 insignificant 0.653358 0.655867 -0.0394240 18 0.577905 0.66109 -0.0831877 9.8387e-01 1.0699e-03 weaklyHypometh 1.0000e+00 0.35664020 insignificant 9.9566e-01 0.0041283 weaklyHypometh 1.0000e+00 1 insignificant -0.0625786 0.1405300 insignificant 1.00000 insignificant 0.500727 0.655867 -0.1999550 18 0.426559 0.661093 -0.23453422 1.000000 1.5861e-15 weaklyHypometh 1 1.5861e-12 weaklyHypometh 1.000000 1.4567e-08 weaklyHypometh 1 7.2836e-06 weaklyHypometh -0.20087399 0.0016927 weaklyHypometh 0.24181 insignificant chr4 184991495 184992495 18867 ENSG00000208473 0.815656 454 15 0.794456 187 11 0.807039 197 11 0.85498 401 14 0.826386 89 8 0.78797 492 15 0.790556 137 7 0.748013 132 10 0.787984 75 6 0.882212 90 8 0.848327 257 14 0.829293 63 5 0.89488 177 9 NA 0 0 0.882619 128 10 0.929293 55 6 0.780399 85 7 0.844595 390 14 0.859403 155 15 0.82885 382 15 0.85065 55 6 0.837054 161 12 0.864912 225 12 0.853069 66 6 0.80170 108 10 0.790204 304 15 0.822107 91 10 0.858333 50 4 0.891482 124 10 0.846155 299 15 0.792083 242 14 0.81371 599 15 0.786433 170 11 0.757203 168 14 0.81605 344 15 0.833016 99 9 0.856818 72 7 0.82248 308 15 0.843825 399 14 0.870758 496 14 0.833590 430 14 0.7928650 316 14 0.858452 473 14 0.839924 0.808056 0.801193 0.867785 0.847238 0.798273 0.799300 0.888553 0.816579 0.865551 0.817340 0.822953 0.862428 NA 0.847092 0.912281 0.768485 0.850967 0.863746 0.820497 0.867873 0.886536 0.864955 0.819250 0.91324 0.813134 0.783676 0.920419 0.850107 0.85887 0.814919 0.845801 0.779251 0.7640095 0.86162 0.751942 0.821773 0.8334106 0.812794 0.861680 0.833459 0.886870 0.861612 4 0.833460 0.83635 -0.0030008 14 0.82667 0.818312 0.00835796 0.513072 0.3631635 insignificant 1 1 insignificant 0.867411 0.172952 insignificant 1 1 insignificant -0.0039161 0.7802241 insignificant 1 insignificant 0.833502 0.813953 0.0213398 15 0.837503 0.815480 0.0220234 1.0352e-02 0.897076 weaklyHypermeth 2.6544e-01 1 insignificant 7.3960e-02 0.993823 insignificant 1.0000e+00 1 insignificant 0.0192058 0.30508429 insignificant 1.000000 insignificant 0.833460 0.863765 -0.02520861 14 0.826670 0.84080 -0.0141345 9.4274e-01 2.1838e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 8.5290e-01 2.5124e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0086923 0.6205204 insignificant 1.00000 insignificant 0.836348 0.813793 0.0230606 14 0.818312 0.803178 0.0151336 6.2020e-03 7.1899e-01 weaklyHypermeth 1.7228e-01 1.0000000 insignificant 1.0602e-02 0.981064 weaklyHypermeth 4.0775e-01 1 insignificant 0.0231219 0.20748083 insignificant 1.000000 insignificant 0.836348 0.863765 -0.0226108 14 0.818312 0.84080 -0.0224924 9.8405e-01 4.9393e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant 8.5167e-01 0.7729507 insignificant 1.0000e+00 1 insignificant -0.0047762 0.7750060 insignificant 1.00000 insignificant 0.813793 0.863765 -0.0471712 14 0.803178 0.840804 -0.03762606 0.938046 3.4594e-05 weaklyHypometh 1 2.4710e-03 weaklyHypometh 0.936340 2.0338e-02 weaklyHypometh 1 8.8427e-01 insignificant -0.02789808 0.1893319 insignificant 1.00000 insignificant chr4 184998495 184999495 18868 ENSG00000208473 0.745714 68 5 0.593119 66 5 0.839286 34 5 0.95000 32 1 0.832766 45 5 0.95897 62 5 0.834570 60 4 0.870851 50 5 1.000000 21 1 0.818878 45 5 0.767854 91 6 0.933333 31 4 0.67262 31 1 0.894444 48 5 0.949074 52 5 0.783333 19 2 0.600000 7 0 0.719388 27 1 0.790909 41 4 0.88606 73 5 0.69643 21 1 0.987013 21 1 0.929252 41 4 0.897940 83 5 0.50000 9 1 0.921769 58 5 0.440000 23 3 0.571429 11 0 0.954023 43 1 0.922857 70 5 0.833333 56 5 0.88591 118 6 0.492857 39 1 1.000000 26 1 0.58384 85 5 0.687500 11 0 0.721178 53 5 0.74212 68 5 0.937500 17 1 1.000000 19 1 0.763736 28 1 0.8888889 9 1 0.986667 23 1 0.814286 0.753893 0.812500 0.968750 0.801587 0.897436 0.709416 0.881313 1.000000 0.912946 0.847717 0.833333 0.799107 0.902778 0.920139 0.770833 0.475956 0.799107 0.852273 0.968636 0.937500 0.954545 0.913095 0.891947 NA 0.904762 0.500000 0.812500 0.862069 0.91750 0.979167 0.923985 0.620833 1.0000000 0.60114 0.737938 0.742873 0.8504392 0.937500 1.000000 0.881410 NA 0.966667 0 0.854928 0.88087 -0.0310892 5 0.80266 0.843759 -0.04110164 0.958801 0.2486546 insignificant 1 1 insignificant 0.954298 0.117141 insignificant 1 1 insignificant 0.0270623 0.6641020 lowCoverage 1 lowCoverage 0.854928 0.712766 0.1359689 5 0.802657 0.665486 0.1371713 3.2264e-04 0.964435 weaklyHypermeth 1.0755e-02 1 weaklyHypermeth 5.5212e-02 0.894862 insignificant 1.0000e+00 1 insignificant 0.1174764 0.16509081 lowCoverage 1.000000 lowCoverage 0.854928 0.895833 -0.04250502 1 0.802657 0.82394 -0.0212842 9.2611e-01 8.5072e-02 lowCoverage 1.0000e+00 1.000000 lowCoverage 9.7415e-01 4.8247e-02 lowCoverage 1.0000e+00 1.000000 lowCoverage -0.0932996 0.1021137 lowCoverage 1.00000 lowCoverage 0.880866 0.712766 0.1605199 5 0.843759 0.665486 0.1782730 1.4320e-03 9.9939e-01 weaklyHypermeth 4.4752e-02 1.0000000 weaklyHypermeth 6.6119e-02 0.997385 insignificant 1.0000e+00 1 insignificant 0.0904142 0.33429694 lowCoverage 1.000000 lowCoverage 0.880866 0.895833 -0.0091248 1 0.843759 0.82394 0.0198175 6.2698e-01 2.1910e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 8.5475e-01 0.2511435 lowCoverage 1.0000e+00 1 lowCoverage -0.1203619 0.1070843 lowCoverage 1.00000 lowCoverage 0.712766 0.895833 -0.1530430 1 0.665486 0.823942 -0.15845549 0.948650 1.2932e-02 lowCoverage 1 4.0412e-01 lowCoverage 0.995894 2.2558e-02 lowCoverage 1 9.0233e-01 lowCoverage -0.21077603 0.0336226 lowCoverage 1.00000 lowCoverage chr4 185706195 185707195 18904 IRF2 ENSG00000168310 0.700983 632 17 0.624732 344 14 0.615071 342 17 0.74370 426 16 0.598075 241 14 0.72131 629 17 0.620012 375 17 0.767769 382 16 0.688931 344 16 0.705189 388 17 0.715507 567 17 0.588738 174 12 0.56452 454 16 0.655132 104 7 0.654021 377 17 0.416637 178 10 0.730752 209 12 0.698269 389 16 0.576784 379 17 0.69349 499 16 0.69947 104 10 0.661567 179 16 0.672883 425 17 0.699997 163 13 0.73212 120 9 0.716676 442 17 0.663953 278 14 0.565518 128 10 0.591255 397 16 0.649380 513 17 0.671604 515 17 0.66764 788 17 0.665583 381 16 0.699084 271 17 0.74892 384 17 0.581471 142 10 0.661616 178 16 0.83303 455 17 0.717082 580 17 0.785352 605 16 0.705979 447 16 0.8785950 487 16 0.801830 513 16 0.764702 0.659336 0.644392 0.758251 0.640828 0.809777 0.544429 0.755879 0.689663 0.734479 0.720739 0.616913 0.513836 0.648379 0.647192 0.402631 0.649052 0.777355 0.582227 0.708959 0.815723 0.562706 0.649659 0.685898 0.71808 0.675466 0.656703 0.644550 0.714865 0.61464 0.696163 0.646239 0.719193 0.8068510 0.84172 0.647587 0.794735 0.8660784 0.798195 0.799762 0.738895 0.858470 0.818421 7 0.653328 0.63253 0.0243068 17 0.68535 0.648637 0.03670961 0.616050 0.3695603 insignificant 1 1 insignificant 0.892403 0.371735 insignificant 1 1 insignificant -0.0120237 0.6029419 insignificant 1 insignificant 0.652432 0.775262 -0.1114760 17 0.626784 0.661941 -0.0351567 8.7657e-01 0.014214 weaklyHypometh 1.0000e+00 1 insignificant 9.0500e-01 0.013745 weaklyHypometh 1.0000e+00 1 insignificant -0.0443035 0.29450259 insignificant 1.000000 insignificant 0.653493 0.806991 -0.12147443 17 0.700648 0.72481 -0.0241575 1.0000e+00 9.3108e-05 weaklyHypometh 1.0000e+00 0.031036 weaklyHypometh 9.9996e-01 7.4274e-05 weaklyHypometh 1.0000e+00 0.038182 weaklyHypometh -0.1237867 0.0112291 weaklyHypometh 0.86378 insignificant 0.632542 0.775567 -0.1389764 17 0.627297 0.670464 -0.0431675 3.3602e-01 5.5196e-06 weaklyHypometh 1.0000e+00 0.0018399 weaklyHypometh 5.9107e-01 0.071898 insignificant 1.0000e+00 1 insignificant -0.0322798 0.42123420 insignificant 1.000000 insignificant 0.632658 0.806991 -0.1521432 17 0.670932 0.72481 -0.0538735 9.9937e-01 6.2024e-07 weaklyHypometh 1.0000e+00 0.00062024 weaklyHypometh 9.9969e-01 0.0022905 weaklyHypometh 1.0000e+00 1 insignificant -0.1117631 0.0188201 weaklyHypometh 1.00000 insignificant 0.776425 0.807224 -0.0096672 17 0.707712 0.749784 -0.04207153 0.941174 6.2758e-02 insignificant 1 1.0000e+00 insignificant 0.996864 5.7574e-02 insignificant 1 1.0000e+00 insignificant -0.07948321 0.1249909 insignificant 1.00000 insignificant chr4 186012195 186013195 18914 ACSL1 ENSG00000151726 0.816661 128 7 0.665237 111 6 0.518182 53 7 0.81765 103 7 0.748901 64 4 0.58886 62 5 0.656126 84 4 0.770988 84 7 0.802814 51 7 0.882937 38 4 0.660216 109 7 0.686813 41 4 0.79933 81 7 0.795000 66 7 0.755952 44 5 0.789116 40 2 0.742504 59 2 0.681082 162 6 0.669508 54 5 0.73707 48 5 0.87500 6 0 0.444444 7 0 0.800649 84 7 0.752976 37 5 0.74182 48 2 0.841558 74 5 0.583333 12 0 0.750000 4 0 0.690136 94 7 0.613294 76 5 0.840414 80 5 0.69481 65 5 0.650814 113 6 0.673624 75 6 0.57387 69 7 0.000000 3 0 0.587500 78 2 0.55566 53 5 0.777137 103 5 0.751515 87 5 0.797959 124 7 0.7937271 93 4 0.762690 94 7 0.863970 0.584187 0.559188 0.805893 0.770458 0.695859 0.721134 0.789619 0.836129 0.799012 0.795337 0.593290 0.856047 0.842199 0.815198 0.940223 0.824878 0.845317 0.837363 0.796099 0.789071 0.612392 0.795777 0.777001 0.69218 0.904803 0.554343 0.736083 0.762158 0.65765 0.885918 0.731141 0.810848 0.7272958 0.57065 0.537353 0.596188 0.6514230 0.862851 0.836235 0.782675 0.811341 0.833723 0 0.757288 0.72743 0.0232807 5 0.74481 0.752768 -0.00795711 0.223439 0.8464619 insignificant 1 1 insignificant 0.535069 0.659661 insignificant 1 1 insignificant 0.0102120 0.8056591 lowCoverage 1 lowCoverage 0.757432 0.662404 0.1014487 5 0.750943 0.556446 0.1944968 2.7231e-04 0.999164 weaklyHypermeth 9.7253e-03 1 weaklyHypermeth 1.5267e-03 0.999814 weaklyHypermeth 8.0354e-02 1 weaklyHypermeth 0.2223365 0.08386003 lowCoverage 1.000000 lowCoverage 0.757534 0.791583 -0.02077183 7 0.776061 0.67028 0.1057779 9.5306e-01 5.0899e-01 insignificant 1.0000e+00 1.000000 insignificant 9.6585e-01 4.0792e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0473581 0.0382897 weaklyHypometh 1.00000 insignificant 0.727428 0.665810 0.0756200 5 0.752768 0.626002 0.1267660 2.4833e-02 9.9216e-01 weaklyHypermeth 6.0569e-01 1.0000000 insignificant 2.1209e-02 0.997829 weaklyHypermeth 7.0927e-01 1 insignificant 0.2121245 0.09809116 lowCoverage 1.000000 lowCoverage 0.726962 0.793173 -0.0543470 5 0.717449 0.76604 -0.0485886 9.9205e-01 7.2371e-02 insignificant 1.0000e+00 1.00000000 insignificant 9.8645e-01 0.1475207 insignificant 1.0000e+00 1 insignificant -0.0575700 0.1445862 lowCoverage 1.00000 lowCoverage 0.666667 0.793173 -0.1244648 5 0.644002 0.766038 -0.12203549 0.998873 2.9957e-03 weaklyHypometh 1 1.1983e-01 insignificant 0.999866 3.4637e-03 weaklyHypometh 1 2.8864e-01 insignificant -0.26969457 0.0471986 lowCoverage 1.00000 lowCoverage chr4 187809995 187810995 18966 MTNR1A ENSG00000168412 0.788188 383 7 0.908539 85 5 0.547869 91 7 0.86110 167 7 0.902101 50 6 0.91914 221 7 0.869388 45 3 0.930998 56 3 0.825397 40 2 0.914286 59 3 0.942151 144 7 0.666667 19 1 0.92095 91 7 0.911765 34 2 0.882313 113 7 0.891667 40 2 1.000000 16 0 0.691154 450 7 0.910683 202 7 0.87560 256 7 0.78000 33 3 0.491126 149 7 0.843244 175 7 0.740051 65 7 0.84738 126 7 0.925611 117 7 0.869637 105 6 0.694444 9 0 0.759217 102 7 0.883237 114 7 0.816839 119 7 0.94654 278 7 0.704601 104 7 0.840918 223 7 0.93878 227 7 0.113937 107 6 0.906463 43 3 0.37900 318 7 0.252902 359 7 0.460816 352 7 0.596588 350 7 0.7025085 399 7 0.387588 267 7 0.789753 0.839898 0.576618 0.846518 0.836064 0.935094 0.835941 0.934549 0.793651 0.938095 0.942805 0.682540 0.912961 0.890496 0.873658 0.897375 0.965114 0.663305 0.901383 0.847653 0.828844 0.550246 0.858376 0.665306 0.84499 0.922037 0.900707 0.691383 0.753049 0.84922 0.763097 0.932847 0.659219 0.9076348 0.98299 0.247653 0.930367 0.3242482 0.238415 0.432750 0.582491 0.710066 0.380937 1 0.803669 0.82399 -0.0150086 7 0.83029 0.829793 0.00049808 0.596722 0.4600839 insignificant 1 1 insignificant 0.100379 0.988935 insignificant 1 1 insignificant 0.0582199 0.1890928 lowCoverage 1 lowCoverage 0.803669 0.635029 0.1671345 7 0.830291 0.620411 0.2098805 1.4112e-07 0.999350 weaklyHypermeth 8.3011e-06 1 weaklyHypermeth 2.9029e-03 0.988134 weaklyHypermeth 1.4514e-01 1 insignificant 0.2107146 0.18237985 lowCoverage 1.000000 lowCoverage 0.803669 0.465547 0.33342938 7 0.830291 0.47502 0.3552732 4.1697e-23 1.0000e+00 hypermethylated 4.1697e-20 1.000000 hypermethylated 1.6466e-13 1.0000e+00 hypermethylated 1.6466e-10 1.000000 hypermethylated 0.3779171 0.0065404 lowCoverage 0.81755 lowCoverage 0.823994 0.635029 0.1955967 7 0.829793 0.620411 0.2093824 1.8152e-05 9.9992e-01 weaklyHypermeth 9.0760e-04 1.0000000 weaklyHypermeth 6.8285e-02 0.870043 insignificant 1.0000e+00 1 insignificant 0.1524947 0.31958732 insignificant 1.000000 insignificant 0.823994 0.465547 0.3537505 7 0.829793 0.47502 0.3547751 1.0736e-15 1.0000e+00 hypermethylated 5.3680e-13 1.00000000 hypermethylated 1.9143e-09 1.0000000 hypermethylated 1.9143e-06 1 hypermethylated 0.3196972 0.0109497 weaklyHypermeth 1.00000 insignificant 0.635029 0.465547 0.1586258 7 0.620411 0.475018 0.14539272 0.051727 9.9611e-01 insignificant 1 1.0000e+00 insignificant 0.013397 9.9969e-01 weaklyHypermeth 1 1.0000e+00 insignificant 0.16720249 0.3171650 insignificant 1.00000 insignificant chr5 426450 427450 19031 AHRR ENSG00000063438 0.114330 1847 65 0.0952181 1457 63 0.1148303 1744 65 0.128005 1647 49 0.093415 1103 63 0.1282116 2031 63 0.133219 2005 65 0.1103930 1332 65 0.0927105 1700 66 0.1345662 1840 67 0.1089318 1981 66 0.1285997 1945 65 0.0776553 1849 65 0.209480 253 9 0.1019005 2119 67 0.0970616 1809 65 0.0605194 1643 60 0.106206 1895 61 0.060977 1618 65 0.0923250 2217 65 0.165100 622 50 0.0799887 1245 47 0.092113 1450 66 0.108979 877 59 0.0540563 881 47 0.1105895 1997 65 0.1168148 1163 61 0.097120 884 57 0.1106215 1343 64 0.0986294 1966 65 0.0708317 2074 65 0.153174 2404 64 0.0370573 1206 64 0.0587950 1504 65 0.030970 1382 44 0.032384 1009 42 0.093421 756 53 0.0413230 1930 65 0.096493 2368 61 0.081996 2459 63 0.1301894 1656 49 0.0478461 2378 60 0.076300 2062 57 0.1146381 0.0882471 0.1073703 0.08629896 0.080954 0.131805 0.1025705 0.1021191 0.079896 0.1242098 0.1017897 0.1397070 0.0621074 NA 0.0734305 0.10833747 0.0788371 0.08104215 0.0684961 0.0746801 0.1583226 0.07144123 0.109269 0.106486 0.0672904 0.0578765 0.1042420 0.100140 0.0957583 0.0534128 0.0588690 0.183828 0.0354266 0.0255726 0.0310598 0.03609144 0.0836499 0.0290443 0.1069578 0.0759533 0.0908524 0.052462 0.064292 43 0.106791 0.096539 0.00695984 65 0.1099395 0.1222078 -0.01226832 0.491267 0.93914227 insignificant 1 1.000000 insignificant 0.25104 9.9796e-01 insignificant 1 1.00000000 insignificant 0.0045928 0.6937375 insignificant 1.00000 insignificant 0.106796 0.0324942 0.0761656 65 0.1125322 0.0479066 0.06462555 1.1598e-40 1.0000e+00 weaklyHypermeth 1.6569e-38 1.0000000 weaklyHypermeth 3.1335e-28 1.00000000 weaklyHypermeth 1.0445e-25 1.00000 weaklyHypermeth 0.06043597 4.1772e-04 weaklyHypermeth 2.7848e-02 weaklyHypermeth 0.106900 0.0629864 0.0144145 60 0.1244712 0.1198135 0.0046577 5.2426e-03 9.5456e-01 weaklyHypermeth 3.2766e-01 1.0000e+00 insignificant 5.8579e-02 9.8073e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0228629 1.8079e-01 insignificant 1.0000000 insignificant 0.096532 0.0324900 0.0671634 65 0.1221380 0.0473078 0.07483026 1.7551e-20 1.00000000 weaklyHypermeth 1.4626e-18 1.00000 weaklyHypermeth 2.6806e-15 1.00000000 weaklyHypermeth 6.7016e-13 1.00000 weaklyHypermeth 0.0558431 1.0732e-03 weaklyHypermeth 0.05648167 weaklyHypermeth 0.096476 0.0629063 0.0118728 60 0.1205689 0.1149393 0.0056296 2.4838e-01 7.7015e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.6091e-01 5.6370e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0182701 0.29339066 insignificant 1.00000 insignificant 0.0323949 0.0628263 -0.04652068 60 0.0471661 0.1048061 -0.05764002 1.0000e+00 3.9619e-22 weaklyHypometh 1.00000000 6.6031e-20 weaklyHypometh 1.00000000 3.0101e-12 weaklyHypometh 1.00000 7.5252e-10 weaklyHypometh -0.0375731 5.5493e-02 insignificant 1.0000000 insignificant chr5 452650 453650 19033 AHRR ENSG00000063438 0.585938 460 11 0.4899258 343 17 0.4472984 363 11 0.375089 466 10 0.509878 161 17 0.5301033 511 11 0.547673 240 16 0.5937412 243 17 0.3154099 244 16 0.6107432 196 11 0.6822717 429 17 0.8139388 171 7 0.3173545 220 11 0.245455 42 4 0.3281495 241 11 0.7499611 139 8 0.6656817 173 7 0.316678 516 10 0.433743 207 10 0.3641589 484 11 0.669209 137 11 0.6392219 230 10 0.433013 367 11 0.702056 209 17 0.3402204 217 10 0.3745515 447 17 0.6939351 260 11 0.780031 97 8 0.6535316 184 11 0.2077161 511 17 0.2795837 550 17 0.900295 603 17 0.0011765 418 17 0.0045467 296 10 0.000000 399 17 0.018484 140 7 0.040709 285 16 0.0072320 454 17 0.230865 644 10 0.213721 645 17 0.2823789 496 10 0.2693516 366 9 0.338039 582 11 0.6379607 0.5692228 0.5332739 0.52401116 0.579523 0.581802 0.6691398 0.6197845 0.448309 0.5807380 0.6890382 0.8125168 0.3785114 0.527354 0.3907265 0.70537030 0.6346020 0.39989265 0.4123290 0.4248668 0.8219368 0.39582257 0.639695 0.755169 0.4819534 0.4460294 0.6748660 0.795066 0.6620547 0.2459550 0.3652330 0.883344 0.0028689 0.0098945 0.0000000 0.01554244 0.0873400 0.0146326 0.2708778 0.3254092 0.4355829 0.323464 0.352871 8 0.531999 0.533930 -0.00877360 11 0.4441845 0.5465585 -0.10237400 0.936832 0.71425184 insignificant 1 1.000000 insignificant 0.99990 2.6025e-01 insignificant 1 1.00000000 insignificant -0.0599542 0.4213129 insignificant 1.00000 insignificant 0.532181 0.0110442 0.5213346 11 0.4964415 0.0074724 0.48896908 2.2178e-75 1.0000e+00 hypermethylated 1.1089e-72 1.0000000 hypermethylated 8.1113e-34 1.00000000 hypermethylated 8.1113e-31 1.00000 hypermethylated 0.48413487 2.0297e-11 hypermethylated 2.8996e-09 hypermethylated 0.532181 0.2930845 0.2375282 10 0.4964415 0.2621039 0.2343377 7.6665e-19 1.0000e+00 hypermethylated 3.8333e-16 1.0000e+00 hypermethylated 8.3373e-13 1.0000e+00 hypermethylated 8.3373e-10 1.0000e+00 hypermethylated 0.2292884 1.8154e-05 hypermethylated 0.0090768 hypermethylated 0.533439 0.0110442 0.5268387 14 0.4932125 0.0074724 0.48574003 1.2768e-45 1.00000000 hypermethylated 2.5537e-43 1.00000 hypermethylated 1.4736e-30 1.00000000 hypermethylated 1.4736e-27 1.00000 hypermethylated 0.5440891 3.0573e-06 hypermethylated 0.00030573 hypermethylated 0.533439 0.2930845 0.2515027 10 0.4932125 0.2621039 0.2311086 3.2625e-09 1.0000e+00 hypermethylated 1.6312e-06 1.0000e+00 hypermethylated 1.0534e-10 1.0000e+00 hypermethylated 1.0534e-07 1.0000e+00 hypermethylated 0.2892426 0.00080618 hypermethylated 0.39869 insignificant 0.0110442 0.2930845 -0.27088623 10 0.0074724 0.2621039 -0.25463143 1.0000e+00 1.0202e-33 hypomethylated 1.00000000 3.4006e-31 hypomethylated 1.00000000 9.2516e-16 hypomethylated 1.00000 4.6258e-13 hypomethylated -0.2548465 1.4351e-04 hypomethylated 0.0143506 hypomethylated chr5 538150 539150 19037 ENSG00000188242 0.800357 260 8 0.7544974 89 9 0.5936841 135 8 0.826689 175 8 0.765041 60 5 0.8208253 258 9 0.783929 38 5 0.7414212 154 9 0.6922123 72 8 0.8603103 149 9 0.8911154 230 9 0.5555556 17 0 0.5943745 223 8 0.871111 81 4 0.7784722 33 3 0.2500000 11 0 0.7000000 13 0 0.788941 355 8 0.806859 173 8 0.7135817 224 8 0.847865 121 9 0.8737351 80 5 0.881436 119 9 0.912963 43 4 0.9149866 80 5 0.8471676 163 9 0.8521599 196 9 0.800000 16 0 0.8455191 164 9 0.7546530 152 9 0.7994048 169 10 0.835984 209 9 0.4296752 109 9 0.6806393 273 9 0.449003 108 4 0.555163 114 2 0.400735 109 9 0.6414325 229 10 0.788564 149 6 0.682377 258 8 0.7862558 167 8 0.6139265 200 8 0.683499 180 8 0.8029352 0.7295499 0.5325858 0.81834658 0.716864 0.811862 0.7333836 0.6986897 0.702734 0.8668036 0.8874355 0.5936073 0.6423393 0.797913 0.7922374 0.42152177 0.7335086 0.78317631 0.8211594 0.7465219 0.9040800 0.89708904 0.898151 0.937900 0.9049743 0.8708526 0.8589000 0.917808 0.7990598 0.7644300 0.8083007 0.823858 0.4749661 0.7495240 0.5315453 0.55340583 0.3683234 0.6975139 0.8116583 0.7394017 0.7584345 0.627843 0.661857 0 0.752000 0.836532 -0.08259801 8 0.7721306 0.8563548 -0.08422417 0.998703 0.00017125 weaklyHypometh 1 0.057084 weaklyHypometh 0.99954 3.7941e-07 weaklyHypometh 1 0.00037941 weaklyHypometh -0.1177074 0.0026390 weaklyHypometh 0.87966 insignificant 0.752000 0.5509554 0.1990707 8 0.7721306 0.5182080 0.25392259 7.6155e-10 1.0000e+00 weaklyHypermeth 2.4566e-08 1.0000000 weaklyHypermeth 9.5151e-06 0.99989688 weaklyHypermeth 4.1370e-04 1.00000 weaklyHypermeth 0.20334077 5.5579e-03 weaklyHypermeth 2.5263e-01 insignificant 0.751913 0.6100629 0.0650343 8 0.7690340 0.7034005 0.0656335 3.5556e-03 8.6587e-01 weaklyHypermeth 2.5581e-01 1.0000e+00 insignificant 4.2989e-02 7.0989e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.0185244 6.9901e-01 insignificant 1.0000000 insignificant 0.836532 0.5509554 0.2777386 9 0.8563548 0.5182080 0.33814676 5.2401e-13 1.00000000 hypermethylated 2.7580e-11 1.00000 hypermethylated 1.7825e-09 1.00000000 hypermethylated 1.9806e-07 1.00000 hypermethylated 0.3210481 7.5249e-04 hypermethylated 0.04180478 hypermethylated 0.835553 0.6100629 0.1497119 8 0.8403942 0.7034005 0.1369937 3.7720e-07 9.9997e-01 weaklyHypermeth 7.5440e-05 1.0000e+00 weaklyHypermeth 5.0033e-05 9.9994e-01 weaklyHypermeth 1.5303e-02 1.0000e+00 weaklyHypermeth 0.1362318 0.01172391 weaklyHypermeth 0.74732 insignificant 0.5569892 0.6100629 -0.12981777 8 0.5665274 0.7034005 -0.13687307 9.9116e-01 1.1056e-02 weaklyHypometh 1.00000000 1.8124e-01 insignificant 0.99747818 6.0836e-03 weaklyHypometh 1.00000 1.8435e-01 insignificant -0.1848163 1.2430e-02 weaklyHypometh 0.4185411 insignificant chr5 725350 726350 19040 CEP72 ENSG00000112877 0.573829 144 8 0.3911210 148 8 0.4291667 64 8 0.410095 196 8 0.343700 57 8 0.6004169 234 8 0.474689 78 8 0.5096691 93 8 0.3541667 66 3 0.5055171 78 3 0.6425268 134 8 0.6925595 41 4 0.1736888 44 3 0.413194 41 3 0.8607143 54 3 0.4800000 9 1 NA 0 0 0.419476 151 5 0.272845 102 3 0.4375223 158 8 0.465432 52 8 0.7015873 73 3 0.582393 76 4 0.952381 73 4 0.4031316 249 10 0.6520787 119 8 0.5447917 55 8 0.648611 28 3 0.4282648 136 3 0.2163912 128 8 0.2002505 150 8 0.824062 128 8 0.0000000 108 8 0.0309343 178 8 0.121345 335 8 0.000000 200 8 0.046230 141 8 0.1111111 228 8 0.255369 246 8 0.193519 210 8 0.4767471 163 8 0.4961580 234 3 0.260033 147 8 0.7118087 0.4201493 0.5214452 0.63501182 0.588758 0.708255 0.5689386 0.7019986 0.529915 0.5951565 0.6776005 0.6382784 0.2480659 0.577894 0.7072927 0.60293643 NA 0.55306152 0.4328350 0.6007984 0.8111888 0.61322524 0.736439 0.853267 0.7720460 0.6026970 0.6522727 0.684848 0.6743711 0.2714028 0.4266620 0.775316 0.0000000 0.0593699 0.2325277 0.00000000 0.0580253 0.0000000 0.4355454 0.4813302 0.4337466 0.411917 0.438121 3 0.545214 0.600475 -0.04493930 8 0.6008609 0.4667874 0.13407347 0.369253 0.37601917 insignificant 1 1.000000 insignificant 0.75142 1.0237e-01 insignificant 1 1.00000000 insignificant -0.0787252 0.3030637 insignificant 1.00000 insignificant 0.545214 0.0285714 0.5094470 8 0.6008609 0.0773054 0.52355553 2.1434e-32 1.0000e+00 hypermethylated 1.9485e-30 1.0000000 hypermethylated 2.0550e-15 1.00000000 hypermethylated 3.4250e-13 1.00000 hypermethylated 0.42128599 7.9419e-10 hypermethylated 9.9273e-08 hypermethylated 0.544974 0.3450000 0.1847748 8 0.5645755 0.3232632 0.2413124 9.1085e-08 1.0000e+00 weaklyHypermeth 3.0362e-05 1.0000e+00 weaklyHypermeth 1.1077e-04 1.0000e+00 weaklyHypermeth 2.7693e-02 1.0000e+00 weaklyHypermeth 0.1365243 1.0034e-01 insignificant 1.0000000 insignificant 0.600158 0.0277778 0.5654622 8 0.4183136 0.0388786 0.37943498 2.2109e-21 0.99999973 hypermethylated 2.0099e-19 1.00000 hypermethylated 2.1917e-13 1.00000000 hypermethylated 3.6528e-11 1.00000 hypermethylated 0.5000112 5.4901e-06 hypermethylated 0.00045751 hypermethylated 0.600158 0.3450000 0.2224891 8 0.4183136 0.3232632 0.0950504 4.2537e-05 9.9397e-01 hypermethylated 6.0767e-03 1.0000e+00 hypermethylated 4.9773e-04 9.9986e-01 hypermethylated 9.9547e-02 1.0000e+00 hypermethylated 0.2152495 0.03405426 weaklyHypermeth 1.00000 insignificant 0.0277778 0.3450000 -0.29078380 8 0.0388786 0.3232632 -0.28438459 1.0000e+00 1.1478e-24 hypomethylated 1.00000000 2.2955e-22 hypomethylated 1.00000000 1.1469e-10 hypomethylated 1.00000 2.2937e-08 hypomethylated -0.2847617 7.7809e-03 weaklyHypometh 0.3298667 insignificant chr5 835850 836850 19042 ZDHHC11B ENSG00000206077 0.151116 958 17 0.0855182 883 17 0.0942661 1006 17 0.060006 443 13 0.086271 602 17 0.1113279 1108 18 0.029132 862 17 0.0825355 483 17 0.1076346 1276 17 0.0458634 1497 17 0.0664057 1022 17 0.0663152 1029 17 0.1175952 986 17 0.109672 251 11 0.0432496 991 17 0.1875616 575 17 0.0320842 798 15 0.093402 810 16 0.065117 662 17 0.1494519 711 18 0.152390 557 17 0.0717404 784 15 0.116730 1149 17 0.021590 357 16 0.1254729 577 14 0.1568177 1352 17 0.0697812 770 17 0.048300 452 17 0.0998729 690 17 0.0284838 960 17 0.0097234 752 17 0.090591 914 17 0.0597471 1296 17 0.0155709 561 15 0.009671 699 17 0.034933 249 13 0.076244 297 16 0.0315686 668 17 0.114726 1474 17 0.096164 789 15 0.0232869 488 14 0.0671518 859 16 0.068191 1036 17 0.0765094 0.0738406 0.0773356 0.04804615 0.026316 0.055234 0.0292493 0.0660498 0.042377 0.0287667 0.0503153 0.0596187 0.0089550 0.092526 0.0310703 0.20197751 0.0385952 0.05988729 0.0081912 0.0747674 0.1361255 0.01144331 0.071139 0.016811 0.1006406 0.0863785 0.0517382 0.043098 0.0637642 0.0161922 0.0082793 0.044506 0.0045421 0.0061369 0.0053124 0.01789891 0.0138535 0.0157332 0.0393195 0.0299290 0.0188404 0.027676 0.060775 13 0.053324 0.062722 -0.00508942 17 0.1399580 0.1072631 0.03269494 0.833424 0.20650045 insignificant 1 1.000000 insignificant 0.20528 9.2066e-01 insignificant 1 1.00000000 insignificant 0.0066018 0.7031580 insignificant 1.00000 insignificant 0.053324 0.0122016 0.0462986 17 0.1399580 0.0925228 0.04743521 7.8013e-13 1.0000e+00 weaklyHypermeth 3.3919e-11 1.0000000 weaklyHypermeth 3.0794e-16 1.00000000 weaklyHypermeth 6.1587e-14 1.00000 weaklyHypermeth 0.05127058 2.6340e-03 weaklyHypermeth 1.3863e-01 insignificant 0.053324 0.0294941 0.0158660 17 0.1399580 0.0916994 0.0482586 8.1184e-03 9.0581e-01 weaklyHypermeth 4.5102e-01 1.0000e+00 insignificant 1.9032e-03 9.9947e-01 weaklyHypermeth 2.7189e-01 1.0000e+00 insignificant 0.0153223 4.2348e-01 insignificant 1.0000000 insignificant 0.062722 0.0122016 0.0541180 17 0.1072631 0.0925228 0.01474027 6.4118e-11 0.99999999 weaklyHypermeth 2.6716e-09 1.00000 weaklyHypermeth 1.2868e-09 1.00000000 weaklyHypermeth 1.6086e-07 1.00000 weaklyHypermeth 0.0446688 2.3054e-02 weaklyHypermeth 0.66544878 insignificant 0.062715 0.0294877 0.0199688 17 0.1018999 0.0871144 0.0147855 4.0252e-02 9.9951e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 7.8677e-02 9.9833e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0087205 0.68764304 insignificant 1.00000 insignificant 0.0122016 0.0294941 -0.02893017 17 0.0925228 0.0916994 0.00082340 9.9998e-01 1.3154e-06 weaklyHypometh 1.00000000 5.9793e-05 weaklyHypometh 0.99997541 2.5442e-04 weaklyHypometh 1.00000 1.5901e-02 weaklyHypometh -0.0359483 9.4475e-02 insignificant 1.0000000 insignificant chr5 837450 838450 19043 ZDHHC11B ENSG00000206077 0.076496 5713 74 0.0492012 3601 77 0.0354525 3005 77 0.042840 3545 73 0.032589 2138 76 0.0969405 5575 80 0.023960 2881 75 0.0483794 2475 74 0.0317500 4356 79 0.0263577 5388 75 0.0336432 2961 76 0.0219999 2306 75 0.0250264 3143 71 0.019749 1711 50 0.0327941 3870 74 0.0276430 1880 70 0.0141914 2015 59 0.024895 8591 77 0.036247 1982 74 0.0680890 4255 78 0.047809 1711 71 0.0259526 3835 70 0.057291 3901 77 0.044622 1684 72 0.0327506 3112 73 0.0267771 5419 77 0.0593569 3341 78 0.039681 2176 74 0.0348818 2945 77 0.0495012 3057 77 0.0205273 3164 77 0.048718 3567 76 0.0306838 3187 77 0.0607826 2302 74 0.016677 3118 69 0.066715 1390 63 0.081704 1198 76 0.0396217 3298 77 0.050268 8105 76 0.031801 4752 78 0.0396936 3635 73 0.0454705 5388 76 0.048095 6780 78 0.0141361 0.0154889 0.0179282 0.01046542 0.020044 0.028693 0.0157588 0.0128051 0.013130 0.0165086 0.0239611 0.0247107 0.0079177 0.017318 0.0208918 0.01655990 0.0112887 0.00945426 0.0127779 0.0170403 0.0404265 0.00487929 0.032752 0.012883 0.0124184 0.0118550 0.0147964 0.011578 0.0192506 0.0125886 0.0088562 0.019882 0.0111570 0.0072799 0.0123091 0.01371658 0.0194014 0.0043112 0.0092539 0.0075870 0.0058601 0.010813 0.013437 69 0.016208 0.016486 0.00042280 74 0.0607183 0.0627406 -0.00202230 0.845150 0.98946409 insignificant 1 1.000000 insignificant 0.87147 9.9917e-01 insignificant 1 1.00000000 insignificant -0.0022435 0.7061959 insignificant 1.00000 insignificant 0.016198 0.0114538 0.0054559 74 0.0629414 0.0810447 -0.01810331 1.4017e-02 4.4295e-01 weaklyHypermeth 2.1564e-01 1.0000000 insignificant 5.4590e-02 0.98005423 insignificant 8.2712e-01 1.00000 insignificant -0.01095182 3.5159e-01 insignificant 1.0000e+00 insignificant 0.016134 0.0108165 0.0049794 73 0.0528796 0.0693465 -0.0164669 4.2786e-01 8.9997e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.2350e-01 9.8911e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0046532 4.2483e-01 insignificant 1.0000000 insignificant 0.016471 0.0114546 0.0048271 74 0.0643160 0.0817683 -0.01745234 4.7567e-01 0.23527470 insignificant 1.0000e+00 1.00000 insignificant 4.8250e-01 0.97803796 insignificant 1.0000e+00 1.00000 insignificant -0.0087083 4.4205e-01 insignificant 1.00000000 insignificant 0.016269 0.0107831 0.0044534 73 0.0503497 0.0676259 -0.0172762 8.0355e-01 9.9457e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9289e-01 9.8503e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0024097 0.63327882 insignificant 1.00000 insignificant 0.0112585 0.0107493 -0.00174457 73 0.0736351 0.0668339 0.00680121 9.2339e-01 8.5822e-03 weaklyHypometh 1.00000000 1.4926e-01 insignificant 0.99993521 3.6740e-01 insignificant 1.00000 1.0000e+00 insignificant 0.0062986 5.7106e-01 insignificant 1.0000000 insignificant chr5 1011650 1012650 19047 TRIP13 ENSG00000071539 0.856637 634 12 0.8221917 428 12 0.7570783 371 12 0.927432 433 12 0.897756 209 12 0.7936655 777 12 0.684391 190 12 0.8945232 399 12 0.8240287 291 12 0.6054096 413 12 0.7328846 502 12 0.8703809 91 9 0.8388249 461 12 0.967923 284 12 0.9154347 481 12 0.8041005 124 10 0.3333333 7 0 0.886995 606 12 0.940685 770 12 0.7535633 657 12 0.818459 210 9 0.9205357 153 9 0.658292 459 12 0.859193 167 12 0.8055096 83 6 0.9330598 559 12 0.8385796 354 12 0.746875 149 9 0.9102705 664 12 0.7869242 503 12 0.8850499 520 12 0.850508 601 12 0.3474835 367 12 0.8311172 448 12 0.455128 199 11 0.677183 28 3 0.476894 372 12 0.8611962 645 12 0.909375 529 12 0.838416 516 12 0.7772673 389 12 0.8684065 867 12 0.904841 449 12 0.9257231 0.8268075 0.8230621 0.93216744 0.906168 0.926309 0.7938771 0.8907765 0.849854 0.9013606 0.9142292 0.8704625 0.9051740 0.972086 0.8817147 0.78962098 0.7370546 0.89095051 0.9354311 0.9186987 0.8641533 0.91232331 0.871209 0.950331 0.9256009 0.9247845 0.8679603 0.840854 0.9236479 0.9206719 0.9513668 0.914259 0.3854774 0.8486788 0.4994759 0.65047314 0.5057405 0.8306782 0.9127883 0.9292746 0.8895141 0.907680 0.909051 9 0.897600 0.913388 -0.01580718 12 0.6064377 0.7195076 -0.11306991 0.998825 0.05268236 insignificant 1 1.000000 insignificant 0.99989 1.4568e-01 insignificant 1 1.00000000 insignificant -0.0290761 0.4656570 insignificant 1.00000 insignificant 0.898361 0.6731423 0.2299556 12 0.7134239 0.5774418 0.13598208 1.8570e-17 1.0000e+00 hypermethylated 9.7738e-16 1.0000000 hypermethylated 3.7288e-05 0.99999543 hypermethylated 1.5063e-03 1.00000 hypermethylated 0.19719492 7.4579e-02 insignificant 1.0000e+00 insignificant 0.898890 0.9021818 -0.0076664 12 0.7505185 0.7551029 -0.0045844 9.6944e-01 1.3662e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8888e-01 2.0657e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0542992 1.9390e-01 insignificant 1.0000000 insignificant 0.914000 0.6733106 0.2445585 12 0.7924720 0.5819972 0.21047486 9.3192e-12 1.00000000 hypermethylated 4.6596e-10 1.00000 hypermethylated 3.7401e-06 1.00000000 hypermethylated 2.0779e-04 1.00000 hypermethylated 0.2262710 4.7624e-02 weaklyHypermeth 1.00000000 insignificant 0.915304 0.9021818 0.0051994 12 0.8705730 0.7551029 0.1154701 5.5681e-01 9.0919e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.7279e-01 9.4327e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0252231 0.46481289 insignificant 1.00000 insignificant 0.6736483 0.9034257 -0.24097222 12 0.5995680 0.8344033 -0.23483528 1.0000e+00 6.4977e-06 hypomethylated 1.00000000 2.4991e-04 hypomethylated 0.99999999 2.9187e-04 hypomethylated 1.00000 1.7169e-02 hypomethylated -0.2514942 3.3194e-02 weaklyHypometh 0.8069397 insignificant chr5 1056550 1057550 19048 ENSG00000221244 0.755800 1452 29 0.5208002 662 29 0.5668113 792 29 0.562203 1317 27 0.652064 353 25 0.3635964 1203 30 0.726641 659 29 0.7721566 616 28 0.6478876 702 28 0.8097587 550 25 0.5922164 858 29 0.6928399 495 24 0.6712312 710 29 0.766053 49 4 0.5198549 717 29 0.6359974 254 18 0.3143679 411 25 0.645478 1639 23 0.295192 716 29 0.7414810 909 30 0.886651 300 28 0.4555113 470 20 0.679121 960 30 0.683705 352 25 0.8113076 465 21 0.8254409 652 27 0.7472616 527 28 0.604413 225 19 0.7254657 664 24 0.2355440 1253 30 0.4445332 943 29 0.764595 1213 30 0.5482232 750 29 0.8161815 744 28 0.739081 632 19 0.366098 334 25 0.463399 411 27 0.1849358 1046 29 0.755301 1311 30 0.742330 1306 29 0.5959616 1143 30 0.5887183 1750 30 0.623974 1360 29 0.7902216 0.5479548 0.6242357 0.62640892 0.659665 0.421127 0.7534739 0.7871569 0.686979 0.8297703 0.6364812 0.7390062 0.6937821 NA 0.5865122 0.66565542 0.3899993 0.64582752 0.3292191 0.7592583 0.8926279 0.49245537 0.708712 0.717481 0.8179975 0.8463236 0.7661991 0.683140 0.7374332 0.2877615 0.4992048 0.816789 0.5618941 0.7834621 0.7439892 0.38681908 0.5544696 0.1757819 0.7478133 0.7639618 0.6439514 0.630509 0.658726 20 0.639490 0.641147 -0.01386740 29 0.6174840 0.6300865 -0.01260249 0.988863 0.70935624 insignificant 1 1.000000 insignificant 1.00000 9.2066e-03 weaklyHypometh 1 1.00000000 insignificant -0.0426742 0.5143681 insignificant 1.00000 insignificant 0.639472 0.4950141 0.1499809 29 0.6139239 0.4818772 0.13204675 1.5679e-11 9.9994e-01 weaklyHypermeth 6.0303e-10 1.0000000 weaklyHypermeth 2.1413e-03 0.99996780 weaklyHypermeth 5.2226e-02 1.00000 weaklyHypermeth 0.09296842 3.9373e-01 insignificant 1.0000e+00 insignificant 0.639418 0.7160116 -0.0575587 30 0.5919830 0.6689940 -0.0770110 1.0000e+00 1.5994e-05 weaklyHypometh 1.0000e+00 5.3312e-03 weaklyHypometh 9.9995e-01 1.5713e-03 weaklyHypometh 1.0000e+00 2.5756e-01 insignificant -0.0486354 3.4422e-01 insignificant 1.0000000 insignificant 0.641077 0.4947611 0.1525147 29 0.6224344 0.4677043 0.15473008 1.6775e-07 0.99998787 weaklyHypermeth 5.4113e-06 1.00000 weaklyHypermeth 6.9446e-04 0.99999952 weaklyHypermeth 1.9291e-02 1.00000 weaklyHypermeth 0.1356426 2.5263e-01 insignificant 1.00000000 insignificant 0.640923 0.7160116 -0.0438028 29 0.6054256 0.6689940 -0.0635684 9.9992e-01 5.2235e-03 weaklyHypometh 1.0000e+00 8.7058e-01 insignificant 6.6451e-01 4.1687e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0059613 0.92895328 insignificant 1.00000 insignificant 0.4951332 0.7160116 -0.20558783 29 0.4967315 0.6689940 -0.17226246 1.0000e+00 1.5634e-08 hypomethylated 1.00000000 8.2286e-07 hypomethylated 0.99999999 4.4571e-04 hypomethylated 1.00000 2.3459e-02 hypomethylated -0.1416039 2.1361e-01 insignificant 1.0000000 insignificant chr5 1120550 1121550 19049 NKD2 ENSG00000145506 1.000000 75 6 0.8304812 142 7 0.9109940 205 5 0.964626 58 3 0.960947 156 5 0.9642857 78 4 0.977221 243 5 0.9499759 125 7 0.9465330 111 7 0.9560008 129 7 0.9481057 217 7 0.9518883 170 5 0.9611111 195 7 NA 0 0 0.9933555 162 5 0.8445514 118 5 0.9628229 120 5 0.938095 64 2 0.968303 260 7 0.9535656 90 6 0.738889 61 7 1.0000000 14 2 0.989011 63 7 0.981818 45 4 0.9370567 96 2 0.9701433 197 6 0.9526164 68 5 0.866837 53 5 0.9336825 223 7 0.9149296 208 7 0.9553959 192 7 0.939116 88 7 0.9082402 185 7 0.8701152 167 7 1.000000 246 5 0.673469 35 2 0.833639 60 7 0.7556303 176 7 0.952381 49 6 0.965820 66 7 0.9771062 32 2 0.9166667 36 2 0.974359 34 2 1.0000000 0.9620611 0.9351642 0.93939394 0.947602 0.954545 0.9685170 0.9820426 0.948786 0.9725445 0.9370268 0.9377569 0.9606061 NA 0.9859056 0.81947280 0.9701597 1.00000000 0.9763085 0.9531025 0.9696970 0.99831169 0.976690 0.972452 NA 0.9841524 0.9675325 0.834848 0.9563667 0.9572987 0.9683510 0.935498 0.8954838 0.9893048 1.0000000 0.96969697 0.9766900 0.8501248 1.0000000 0.9724518 1.0000000 1.000000 1.000000 0 0.950331 0.945636 0.00260227 7 0.8304418 0.8881241 -0.05768226 0.184573 0.27343787 insignificant 1 1.000000 insignificant 0.48216 4.8112e-01 insignificant 1 1.00000000 insignificant 0.0148419 0.5208068 insignificant 1.00000 insignificant 0.950331 0.8722670 0.0656131 7 0.8304418 0.7374591 0.09298270 1.4457e-05 3.1979e-01 weaklyHypermeth 3.0760e-04 1.0000000 weaklyHypermeth 2.2979e-02 0.21255288 weaklyHypermeth 4.0052e-01 1.00000 insignificant 0.10628421 7.3030e-02 insignificant 1.0000e+00 insignificant 0.950681 0.9354839 0.0113125 4 0.9490764 0.9613077 -0.0122313 6.8385e-01 2.2061e-03 lowCoverage 1.0000e+00 2.2061e-01 lowCoverage 3.5290e-01 1.7105e-03 lowCoverage 1.0000e+00 2.5756e-01 lowCoverage -0.0108001 4.7991e-01 lowCoverage 1.0000000 lowCoverage 0.945636 0.8722670 0.0889385 7 0.8881241 0.7374591 0.15066496 7.2359e-04 0.69518125 weaklyHypermeth 1.2264e-02 1.00000 weaklyHypermeth 8.0100e-02 0.82970292 insignificant 1.0000e+00 1.00000 insignificant 0.0914423 1.1728e-01 insignificant 1.00000000 insignificant 0.947005 0.9354839 -0.0030706 4 0.9435704 0.9613077 -0.0177373 7.4623e-01 3.4615e-03 lowCoverage 1.0000e+00 8.6538e-01 lowCoverage 6.9362e-01 1.8422e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0256420 0.28558099 lowCoverage 1.00000 lowCoverage 0.8732719 0.9354839 -0.18532662 4 0.8428104 0.9613077 -0.11849725 9.7982e-01 2.7431e-03 lowCoverage 1.00000000 5.5982e-02 lowCoverage 0.99923710 8.7911e-03 lowCoverage 1.00000 2.1978e-01 lowCoverage -0.1170843 5.4569e-02 lowCoverage 1.0000000 lowCoverage chr5 1171450 1172450 19052 SLC12A7 ENSG00000113504 0.696263 288 7 0.5011899 223 10 0.5244663 228 10 0.797899 204 7 0.540853 199 9 0.7943298 396 6 0.613030 205 10 0.4936117 199 10 0.5123237 121 7 0.4988225 113 7 0.6418732 355 10 0.5109668 93 7 0.4273117 195 7 0.543857 88 3 0.4360043 190 8 0.3796791 69 5 0.1757555 79 4 0.476548 334 6 0.647107 303 10 0.6413940 394 7 0.636724 120 8 0.7000000 7 0 0.581983 215 8 0.696032 82 8 0.8907300 61 3 0.7109140 303 10 0.6250898 200 6 0.507669 80 3 0.6144844 251 10 0.5729258 254 10 0.4972662 304 10 0.910652 341 6 0.3824862 352 10 0.1926392 409 10 0.428520 490 12 0.252652 115 5 0.291595 252 10 0.4513239 420 10 0.670013 264 6 0.587619 239 6 0.6827204 179 6 0.5615864 162 4 0.617605 219 7 0.8980441 0.7158342 0.6941784 0.93374999 0.826930 0.902827 0.8536922 0.7575293 0.748845 0.8557074 0.7893337 0.8606700 0.7239779 0.710832 0.7588766 0.56690143 0.7708390 0.53962999 0.7892675 0.8157785 0.8547034 0.78614240 0.853899 0.955027 0.8346333 0.7815696 0.8240331 0.796156 0.8260122 0.7566642 0.6718974 0.896167 0.1894409 0.0897900 0.2556822 0.15968907 0.1826270 0.2879396 0.8221160 0.8389825 0.6249480 0.623154 0.520635 3 0.707836 0.735347 -0.02150587 10 0.4913519 0.6062826 -0.11493069 0.753537 0.04374248 weaklyHypometh 1 1.000000 insignificant 0.99698 4.0337e-03 weaklyHypometh 1 0.72173710 insignificant -0.1193749 0.0234612 weaklyHypometh 1.00000 insignificant 0.707836 0.2664377 0.3962725 10 0.4913519 0.3029440 0.18840787 1.8326e-24 9.9981e-01 hypermethylated 1.4097e-22 1.0000000 hypermethylated 2.1585e-06 0.99993037 hypermethylated 1.0792e-04 1.00000 hypermethylated 0.20946154 2.1007e-03 weaklyHypermeth 1.1671e-01 insignificant 0.707836 0.7243650 0.0755081 6 0.4913519 0.5882590 -0.0969072 3.1138e-01 5.5100e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 5.6232e-01 4.0205e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0812444 5.3482e-02 insignificant 1.0000000 insignificant 0.735347 0.2664377 0.4423028 10 0.6062826 0.3029440 0.30333856 2.1635e-22 0.99999995 hypermethylated 2.1635e-20 1.00000 hypermethylated 2.1945e-07 1.00000000 hypermethylated 1.8287e-05 1.00000 hypermethylated 0.3288365 7.0281e-05 hypermethylated 0.00502007 hypermethylated 0.735347 0.7243650 0.0881078 6 0.6062826 0.5882590 0.0180235 1.1569e-01 5.2373e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.7976e-02 9.7488e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0381306 0.40390013 insignificant 1.00000 insignificant 0.2664377 0.7243650 -0.43416699 6 0.3029440 0.5882590 -0.28531503 1.0000e+00 6.9245e-10 hypomethylated 1.00000000 5.3265e-08 hypomethylated 1.00000000 3.2207e-04 hypomethylated 1.00000 1.7893e-02 hypomethylated -0.2907059 3.7794e-04 hypomethylated 0.0314949 hypomethylated chr5 1171750 1172750 19053 SLC12A7 ENSG00000113504 0.722222 406 11 0.7293022 200 14 0.6361023 211 14 0.838027 337 11 0.765196 156 11 0.7568501 332 10 0.757654 103 10 0.7071565 238 14 0.6161457 139 10 0.7104822 169 10 0.7064327 399 14 0.5596681 96 8 0.6145969 250 12 0.867361 68 4 0.7022125 160 10 0.6676471 54 4 0.5781136 85 4 0.582064 517 10 0.709685 247 14 0.7132762 281 11 0.882242 122 12 0.9372222 96 8 0.766955 172 12 0.742687 95 11 0.8501503 104 7 0.7862176 305 14 0.8632893 189 9 0.564815 23 0 0.6726311 191 12 0.7658398 281 14 0.7104268 359 14 0.927288 312 10 0.6006454 202 14 0.3258312 389 14 0.455556 104 12 0.622024 57 3 0.676345 134 14 0.7472109 330 14 0.772846 208 9 0.860489 322 10 0.9131103 235 10 0.7429834 180 8 0.844587 253 11 0.8955420 0.9216238 0.7877023 0.93892453 0.932523 0.903056 0.9200209 0.8917330 0.835468 0.8879446 0.8876821 0.7349909 0.8321163 0.905162 0.9178791 0.73595308 0.8915897 0.84921554 0.8653076 0.8079183 0.9477513 0.89257453 0.914139 0.933791 0.8551935 0.9137562 0.9209090 0.901282 0.8891531 0.9172695 0.8627504 0.941672 0.7459347 0.3064082 0.5738044 0.75221212 0.8231751 0.8687444 0.8814904 0.9157397 0.8655866 0.819889 0.895215 3 0.766532 0.809079 -0.03346421 14 0.7054482 0.7429941 -0.03754588 0.977526 0.00008290 weaklyHypometh 1 0.041450 weaklyHypometh 0.99998 1.0220e-04 weaklyHypometh 1 0.03406618 weaklyHypometh -0.0921373 0.0211655 weaklyHypometh 1.00000 insignificant 0.766532 0.5575658 0.1799268 14 0.7054482 0.5665704 0.13887784 2.7943e-11 9.9998e-01 weaklyHypermeth 1.0349e-09 1.0000000 weaklyHypermeth 2.0716e-02 0.99993851 weaklyHypermeth 3.6993e-01 1.00000 insignificant 0.12574101 1.0483e-01 insignificant 1.0000e+00 insignificant 0.766532 0.8812709 -0.0104573 10 0.7054482 0.8222436 -0.1167954 9.7678e-01 4.3939e-04 weaklyHypometh 1.0000e+00 6.2769e-02 weaklyHypometh 9.9271e-01 5.1975e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.1297935 8.0499e-03 weaklyHypometh 0.5366579 insignificant 0.809079 0.5575658 0.2222410 14 0.7429941 0.5665704 0.17642373 5.6507e-09 0.99998307 hypermethylated 1.9485e-07 1.00000 hypermethylated 8.8245e-05 0.99999451 hypermethylated 3.5298e-03 1.00000 hypermethylated 0.2178783 1.5791e-02 weaklyHypermeth 0.52637397 insignificant 0.809164 0.8814691 0.0084528 10 0.7541683 0.8299722 -0.0758039 4.9833e-01 2.2588e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.5113e-01 8.8954e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0376562 0.40962732 insignificant 1.00000 insignificant 0.5575658 0.8812709 -0.24098448 10 0.5665704 0.8222436 -0.25567328 1.0000e+00 6.1539e-05 hypomethylated 1.00000000 2.0513e-03 hypomethylated 1.00000000 1.2539e-02 weaklyHypometh 1.00000 2.8499e-01 insignificant -0.2555345 7.9168e-03 weaklyHypometh 0.3298667 insignificant chr5 1196650 1197650 19055 SLC12A7 ENSG00000113504 0.875883 354 8 0.8742893 162 8 0.8735729 133 8 0.899534 284 8 0.933995 100 8 0.9355341 129 8 0.914550 102 8 0.8569646 135 8 0.8580512 128 8 0.9542928 126 8 0.8849105 128 8 0.8814795 132 8 0.9405754 115 7 0.973291 39 4 0.8806205 136 7 0.8097696 118 7 0.8892749 77 5 0.821142 109 7 0.946158 135 8 0.7758189 108 6 0.809258 109 7 0.9195847 100 7 0.959749 213 8 0.797917 67 5 0.8660292 298 9 0.9208316 175 8 0.8134240 130 7 0.899484 88 8 0.8318109 92 8 0.7500000 4 0 0.8356031 158 8 0.943709 308 8 0.6892105 140 8 0.5461019 186 8 0.485013 215 7 0.792918 180 8 0.346429 15 2 0.8237442 186 8 0.929894 319 8 0.846923 322 8 0.9033333 120 8 0.9482896 325 8 0.911417 172 8 0.9145985 0.8685966 0.8984008 0.90657914 0.927602 0.959222 0.9197859 0.8408089 0.833274 0.9422944 0.8895316 0.8642421 0.9455739 0.932997 0.8740869 0.86185368 0.8726210 0.80575107 0.9664568 0.8535138 0.8671222 0.91622547 0.962982 0.778147 0.9663411 0.9398449 0.8431726 0.914591 0.8543191 0.8564296 0.8239946 0.938601 0.7349735 0.6212857 0.3988211 0.81906276 0.4950817 0.8542744 0.9244947 0.9412074 0.9321945 0.951006 0.924769 5 0.892610 0.902985 -0.01487543 8 0.9092577 0.8235341 0.08572360 0.998984 0.24564092 insignificant 1 1.000000 insignificant 0.84495 6.9184e-01 insignificant 1 1.00000000 insignificant 0.0267020 0.2429027 insignificant 1.00000 insignificant 0.892454 0.6388286 0.2368340 8 0.8865721 0.6527560 0.23381609 5.8286e-16 1.0000e+00 hypermethylated 2.9143e-14 1.0000000 hypermethylated 1.3170e-07 0.99991347 hypermethylated 9.4068e-06 1.00000 hypermethylated 0.27508254 1.4942e-02 weaklyHypermeth 4.7767e-01 insignificant 0.892610 0.9348172 -0.0412975 8 0.9092577 0.8432600 0.0659977 1.0000e+00 3.6283e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9800e-01 1.9647e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0189859 3.8232e-01 insignificant 1.0000000 insignificant 0.904212 0.6388286 0.2605335 8 0.9044176 0.6527560 0.25166159 1.1088e-11 1.00000000 hypermethylated 5.2801e-10 1.00000 hypermethylated 2.5240e-05 0.99999654 hypermethylated 1.1473e-03 1.00000 hypermethylated 0.2483806 2.1323e-02 weaklyHypermeth 0.64614970 insignificant 0.902985 0.9348172 -0.0249987 8 0.8235341 0.8432600 -0.0197259 9.9735e-01 4.4923e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9424e-01 4.6284e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0456879 0.09798847 insignificant 1.00000 insignificant 0.6388286 0.9355096 -0.28745957 8 0.6527560 0.9290750 -0.27631898 1.0000e+00 1.4229e-08 hypomethylated 1.00000000 7.9051e-07 hypomethylated 0.99991492 9.5574e-06 hypomethylated 1.00000 8.4511e-04 hypomethylated -0.2940685 1.1014e-02 weaklyHypometh 0.3933532 insignificant chr5 1214850 1215850 19057 SLC12A7 ENSG00000113504 0.811359 272 15 0.6958366 333 15 0.7482370 243 13 0.856690 325 14 0.759615 147 10 0.8503821 513 15 0.763882 153 11 0.8864218 290 15 0.8931314 168 13 0.8704674 256 11 0.9195830 490 16 0.6295238 67 6 0.8495221 470 15 0.861551 271 13 0.6915100 266 10 0.8800000 63 6 1.0000000 11 0 0.858063 429 14 0.751818 490 14 0.8545743 394 14 0.814734 293 13 0.8175339 133 9 0.830049 296 11 0.741566 196 12 0.8736192 147 10 0.8584530 545 16 0.7267819 395 14 0.601222 88 5 0.8905464 630 14 0.8135728 520 16 0.8600912 499 16 0.827764 487 16 0.3857009 375 15 0.4504529 491 14 0.440249 572 9 0.559363 96 4 0.475673 403 18 0.5645432 753 16 0.820555 251 10 0.796450 364 13 0.8101106 169 11 0.7581152 239 12 0.717021 223 13 0.8393688 0.7622161 0.7526706 0.86397697 0.873882 0.879228 0.7836998 0.9439071 0.829729 0.9297083 0.9172511 0.8007962 0.8521467 0.897353 0.8405648 0.90849127 0.9092436 0.80746064 0.8786441 0.8848217 0.8913448 0.81223544 0.891002 0.921449 0.8917537 0.8913812 0.8652743 0.793136 0.9120638 0.8985297 0.9020855 0.901078 0.4289120 0.3529210 0.4863716 0.60542075 0.5093906 0.5801956 0.8093765 0.7977392 0.7876620 0.820115 0.708188 7 0.863717 0.882130 -0.02725167 13 0.7663321 0.7353638 0.03096828 0.982616 0.15781651 insignificant 1 1.000000 insignificant 0.95536 5.3123e-01 insignificant 1 1.00000000 insignificant 0.0169472 0.5842012 insignificant 1.00000 insignificant 0.864587 0.5236147 0.3478868 13 0.8083174 0.4299102 0.37840718 1.1528e-56 1.0000e+00 hypermethylated 2.3056e-54 1.0000000 hypermethylated 2.2224e-14 1.00000000 hypermethylated 3.1748e-12 1.00000 hypermethylated 0.34227819 1.5213e-06 hypermethylated 1.3830e-04 hypermethylated 0.864184 0.7881220 0.0832342 12 0.7821254 0.7617254 0.0204001 2.1506e-04 9.6276e-01 weaklyHypermeth 2.1506e-02 1.0000e+00 weaklyHypermeth 9.4756e-02 8.8092e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0411581 1.5755e-01 insignificant 1.0000000 insignificant 0.883120 0.5236147 0.3578941 14 0.7791069 0.4299102 0.34919666 2.6832e-49 1.00000000 hypermethylated 6.7080e-47 1.00000 hypermethylated 9.3741e-14 1.00000000 hypermethylated 1.8748e-11 1.00000 hypermethylated 0.3253310 1.9794e-06 hypermethylated 0.00021993 hypermethylated 0.884469 0.7881220 0.1052739 12 0.7882282 0.7617254 0.0265028 6.7123e-08 9.9709e-01 weaklyHypermeth 1.6781e-05 1.0000e+00 weaklyHypermeth 9.1227e-03 9.7379e-01 weaklyHypermeth 9.0574e-01 1.0000e+00 insignificant 0.0242109 0.43384158 insignificant 1.00000 insignificant 0.5246453 0.7884151 -0.28339626 12 0.5085890 0.7775685 -0.26897946 9.9997e-01 3.8330e-15 hypomethylated 1.00000000 3.8330e-13 hypomethylated 1.00000000 2.3044e-08 hypomethylated 1.00000 3.2920e-06 hypomethylated -0.3011201 1.7806e-05 hypomethylated 0.0029676 hypomethylated chr5 1343150 1344150 19062 SLC6A18 ENSG00000164363 0.887404 1258 68 0.8508882 3232 83 0.8015649 4049 82 0.936346 2112 76 0.916668 5113 83 0.8796175 1083 76 0.899350 6530 83 0.8918279 1813 83 0.9041456 3296 81 0.8985403 3249 79 0.8851869 4788 83 0.8816467 5423 79 0.9122959 3868 83 NA 0 0 0.9205311 4485 83 0.9092851 4577 81 0.8927013 4382 80 0.910750 1563 71 0.919829 4124 84 0.8835983 988 68 0.873429 1680 81 0.9156903 476 45 0.890452 2617 82 0.861833 1291 76 0.9300733 303 31 0.9143721 2365 81 0.8817400 1359 74 0.920807 2471 83 0.8760940 2300 83 0.8841647 2379 78 0.9050407 1764 76 0.880375 1302 66 0.8214348 2628 83 0.8044525 2720 83 0.843178 3329 82 0.883412 549 48 0.820633 2698 82 0.7492621 1471 71 0.907285 1177 64 0.947451 2226 78 0.9162639 711 50 0.9114006 1333 65 0.941585 1548 71 0.9002398 0.8374047 0.8160097 0.92674474 0.910845 0.889617 0.8951273 0.8842496 0.895454 0.9110240 0.8913460 0.8934459 0.9208578 NA 0.9211103 0.90909669 0.9007929 0.91328686 0.9156685 0.9102524 0.8899886 0.90738240 0.888889 0.893481 0.9370232 0.9086189 0.8929267 0.920441 0.8575059 0.9022829 0.9075353 0.878976 0.8062020 0.8126734 0.8354991 0.88436177 0.8311068 0.7493972 0.9254662 0.9415978 0.9035706 0.913181 0.934613 54 0.890935 0.896538 -0.00169657 83 0.8924885 0.8945112 -0.00202270 0.709469 0.21609295 insignificant 1 1.000000 insignificant 0.99325 1.4627e-02 weaklyHypometh 1 1.00000000 insignificant -0.0007072 0.9396101 insignificant 1.00000 insignificant 0.890935 0.8176185 0.0762495 82 0.8924885 0.8123578 0.08013065 1.5643e-75 1.0000e+00 weaklyHypermeth 1.1089e-72 1.0000000 weaklyHypermeth 7.4121e-32 1.00000000 weaklyHypermeth 3.7061e-29 1.00000 weaklyHypermeth 0.07340346 7.7710e-03 weaklyHypermeth 3.1084e-01 insignificant 0.890935 0.9315225 -0.0302204 72 0.8924885 0.9303922 -0.0379037 1.0000e+00 1.5239e-24 weaklyHypometh 1.0000e+00 1.5239e-21 weaklyHypometh 1.0000e+00 1.8028e-19 weaklyHypometh 1.0000e+00 1.8028e-16 weaklyHypometh -0.0309984 1.5271e-02 weaklyHypometh 0.6735631 insignificant 0.896538 0.8176185 0.0777767 82 0.8945112 0.8123578 0.08215335 1.1070e-49 1.00000000 weaklyHypermeth 3.6900e-47 1.00000 weaklyHypermeth 2.6565e-25 1.00000000 weaklyHypermeth 1.3282e-22 1.00000 weaklyHypermeth 0.0741107 7.6348e-03 weaklyHypermeth 0.30539340 insignificant 0.896538 0.9315225 -0.0317675 72 0.8945112 0.9303922 -0.0358810 1.0000e+00 5.2831e-11 weaklyHypometh 1.0000e+00 2.6415e-08 weaklyHypometh 1.0000e+00 5.9039e-09 weaklyHypometh 1.0000e+00 5.9039e-06 weaklyHypometh -0.0302912 0.01706254 weaklyHypometh 1.00000 insignificant 0.8176185 0.9315225 -0.11241022 72 0.8123578 0.9303922 -0.11803430 1.0000e+00 2.2213e-45 weaklyHypometh 1.00000000 2.2213e-42 weaklyHypometh 1.00000000 5.4552e-29 weaklyHypometh 1.00000 5.4552e-26 weaklyHypometh -0.1044019 1.2249e-03 weaklyHypometh 0.0816612 weaklyHypometh chr5 1574950 1575950 19068 SLC6A3 ENSG00000142319 0.138026 725 11 0.0987532 727 12 0.0890655 693 12 0.179080 710 11 0.092036 591 12 0.3193652 654 11 0.117792 802 12 0.1445474 553 12 0.0945496 737 12 0.0778736 647 12 0.1841800 632 12 0.0871365 661 12 0.0637727 569 12 0.067061 263 8 0.0960297 663 12 0.0772340 650 12 0.0265717 438 7 0.197513 984 10 0.030711 735 12 0.1474939 569 11 0.169812 187 12 0.2724945 235 8 0.196354 392 12 0.128787 298 12 0.2424466 626 8 0.2212080 744 12 0.0939039 358 12 0.120235 299 11 0.2367540 576 12 0.1533311 799 12 0.0947183 719 12 0.101355 620 11 0.1193779 685 12 0.0826020 516 12 0.073191 645 12 0.000000 294 4 0.121495 469 14 0.0706662 726 12 0.296594 716 10 0.322443 463 11 0.1620631 541 8 0.1701457 998 9 0.278578 464 10 0.1876530 0.0971493 0.1081927 0.18199229 0.052711 0.313616 0.1093878 0.0955632 0.100467 0.0637806 0.1113475 0.0763810 0.0411224 0.097894 0.0741385 0.03633796 0.0377737 0.11867469 0.0411081 0.1812880 0.1527789 0.10842024 0.180145 0.060834 0.0756177 0.1088459 0.0932521 0.076490 0.1359454 0.1413157 0.0932972 0.116098 0.0850229 0.0253379 0.0233258 0.00362640 0.0823203 0.1079758 0.2735165 0.2653865 0.1291048 0.168895 0.207485 8 0.099492 0.110921 -0.00511441 12 0.1624143 0.2472771 -0.08486284 0.893733 0.20482626 insignificant 1 1.000000 insignificant 0.98323 3.9684e-01 insignificant 1 1.00000000 insignificant -0.0528437 0.0349080 weaklyHypometh 1.00000 insignificant 0.099315 0.0653673 0.0311804 12 0.1521101 0.0972896 0.05482045 1.6054e-07 7.5238e-01 weaklyHypermeth 4.2248e-06 1.0000000 weaklyHypermeth 1.7792e-06 0.98020361 weaklyHypermeth 9.3642e-05 1.00000 weaklyHypermeth 0.03855084 1.2516e-01 insignificant 1.0000e+00 insignificant 0.099075 0.1876179 -0.0962652 10 0.1348106 0.2776044 -0.1427937 8.5781e-01 1.8957e-20 weaklyHypometh 1.0000e+00 9.4784e-18 weaklyHypometh 9.6651e-01 1.1718e-08 weaklyHypometh 1.0000e+00 5.8588e-06 weaklyHypometh -0.1295254 1.3175e-02 weaklyHypometh 0.6735631 insignificant 0.110636 0.0653673 0.0387982 12 0.2175450 0.0972896 0.12025538 2.9183e-07 0.99951380 weaklyHypermeth 9.1195e-06 1.00000 weaklyHypermeth 1.7652e-06 0.99893739 weaklyHypermeth 1.0383e-04 1.00000 weaklyHypermeth 0.0913946 3.2034e-03 weaklyHypermeth 0.16017025 insignificant 0.109241 0.1876179 -0.1003230 10 0.1806358 0.2776044 -0.0969686 9.9466e-01 7.0505e-17 weaklyHypometh 1.0000e+00 7.0505e-14 weaklyHypometh 9.8748e-01 2.6596e-06 weaklyHypometh 1.0000e+00 1.3298e-03 weaklyHypometh -0.0766816 0.08649280 insignificant 1.00000 insignificant 0.0635786 0.1863393 -0.14877957 10 0.0711603 0.2174047 -0.14624440 9.9987e-01 2.0013e-20 weaklyHypometh 1.00000000 2.8590e-18 weaklyHypometh 0.99791241 2.0820e-08 weaklyHypometh 1.00000 3.2920e-06 weaklyHypometh -0.1680762 3.9956e-03 weaklyHypometh 0.2350361 insignificant chr5 1778350 1779350 19071 ENSG00000188002 0.608006 524 13 0.4264094 495 13 0.7316523 367 18 0.427842 397 13 0.487079 225 10 0.7579371 666 17 0.547314 454 18 0.3993351 445 15 0.5016191 450 18 0.5178843 436 14 0.5603241 539 17 0.6336212 498 18 0.4104238 556 19 0.412241 78 4 0.4402849 500 19 0.6839015 169 13 0.4590589 214 11 0.400043 557 12 0.679497 503 19 0.7235233 600 17 0.496614 161 12 0.2312037 326 12 0.399790 412 12 0.532371 234 13 0.6889372 199 17 0.7630278 680 17 0.7131490 334 13 0.415741 159 9 0.6199265 577 19 0.6147976 872 18 0.4831032 653 13 0.762074 591 13 0.4481630 530 13 0.2109683 500 15 0.494447 389 6 0.650348 133 5 0.694225 313 20 0.6392578 708 13 0.757983 537 13 0.622327 703 13 0.6634393 601 17 0.5439188 583 17 0.465691 643 13 0.6291973 0.3044232 0.7626244 0.34165246 0.505126 0.693797 0.5282298 0.3626030 0.451413 0.5341841 0.4742030 0.6811322 0.2648142 0.529119 0.3792220 0.69591065 0.4290649 0.35974319 0.5769982 0.6425898 0.6045968 0.26732366 0.303792 0.456118 0.5974725 0.6887941 0.5993756 0.500947 0.5580748 0.4413950 0.3764186 0.705472 0.3750778 0.1480334 0.4864955 0.36087735 0.6121030 0.5383043 0.6926402 0.5274545 0.5384501 0.431502 0.459189 7 0.511934 0.576183 0.00095572 16 0.5497259 0.5899859 -0.04026004 0.839966 0.50667844 insignificant 1 1.000000 insignificant 0.26009 6.0723e-01 insignificant 1 1.00000000 insignificant -0.0196614 0.7233781 insignificant 1.00000 insignificant 0.511934 0.4931986 0.0456941 13 0.5497259 0.5655818 -0.01585590 1.1884e-01 2.1377e-02 inconclusive 1.0000e+00 1.0000000 insignificant 4.7627e-01 0.07633643 insignificant 1.0000e+00 1.00000 insignificant 0.01749826 8.3090e-01 insignificant 1.0000e+00 insignificant 0.511995 0.5702641 -0.0276245 16 0.5605455 0.5760654 -0.0155199 8.4572e-01 3.6955e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 5.9739e-01 9.5844e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0702721 2.6065e-01 insignificant 1.0000000 insignificant 0.576183 0.4931986 0.0476708 13 0.5899859 0.5655818 0.02440414 1.2990e-01 0.21705929 insignificant 1.0000e+00 1.00000 insignificant 3.2733e-01 0.09008083 insignificant 1.0000e+00 1.00000 insignificant 0.0371597 6.8076e-01 insignificant 1.00000000 insignificant 0.576020 0.5702641 -0.0364225 17 0.5694852 0.5760654 -0.0065802 7.1097e-01 6.5259e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 8.4295e-01 9.2135e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0506107 0.47717459 insignificant 1.00000 insignificant 0.4933852 0.5702641 -0.07162878 13 0.5771942 0.5760654 0.00112877 1.4395e-01 7.1155e-02 insignificant 1.00000000 9.0069e-01 insignificant 0.64888902 4.6871e-01 insignificant 1.00000 1.0000e+00 insignificant -0.0877703 3.5182e-01 insignificant 1.0000000 insignificant chr5 6402250 6403250 19105 ENSG00000221568 0.915803 645 13 0.7715741 298 11 0.7866936 289 13 0.923511 545 13 0.903818 215 12 0.7496110 700 11 0.834173 365 13 0.6900029 289 13 0.7193043 195 8 0.7780063 238 8 0.8475218 360 13 0.7412593 156 12 0.8976071 274 8 0.740967 139 6 0.7954570 284 12 0.7768519 186 12 0.7555556 358 5 0.880070 531 13 0.919135 516 12 0.7951844 462 11 0.696914 113 4 0.7421027 175 9 0.866656 261 13 0.673797 154 10 0.8064573 280 10 0.8270569 464 13 0.6626838 269 10 0.542251 123 6 0.8112415 504 12 0.8347785 490 13 0.7893522 564 13 0.908459 543 13 0.7806758 356 13 0.6578676 477 12 0.705054 175 4 0.791801 218 9 0.712001 245 13 0.8390127 446 11 0.869877 673 13 0.875698 520 12 0.8577192 681 13 0.9046414 468 12 0.889765 538 11 0.9346379 0.8795168 0.9011787 0.93451998 0.923972 0.916149 0.9223320 0.9263182 0.944015 0.9522568 0.9010113 0.8602837 0.9412116 0.904102 0.9195735 0.81805264 0.9607226 0.91583802 0.9357072 0.9219906 0.9386041 0.89854003 0.919608 0.972500 0.9338214 0.9495903 0.9069158 0.931190 0.9493056 0.9439077 0.9634832 0.952621 0.8878259 0.8539657 0.9056925 0.86748685 0.8804131 0.9090465 0.8890108 0.9214805 0.9210277 0.878716 0.912786 6 0.899489 0.924567 -0.03055379 13 0.7918225 0.5885005 0.20332200 0.990571 0.16170976 insignificant 1 1.000000 insignificant 0.97068 6.7653e-01 insignificant 1 1.00000000 insignificant 0.0476262 0.1794588 insignificant 1.00000 insignificant 0.899560 0.8382890 0.0354861 13 0.7759792 0.7117421 0.06423714 5.6246e-03 9.9220e-01 weaklyHypermeth 9.2207e-02 1.0000000 weaklyHypermeth 2.3230e-02 0.99852259 weaklyHypermeth 4.0052e-01 1.00000 insignificant 0.06337002 7.8898e-02 insignificant 1.0000e+00 insignificant 0.899758 0.8829861 0.0098133 13 0.7820920 0.9030598 -0.1209678 6.3358e-02 1.5730e-02 inconclusive 1.0000e+00 9.2528e-01 insignificant 3.8267e-02 2.7232e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant -0.0684347 1.0938e-03 weaklyHypometh 0.1822980 insignificant 0.926673 0.8382890 0.0742771 13 0.6529768 0.7117421 -0.05876524 3.7213e-06 0.99947810 weaklyHypermeth 9.0762e-05 1.00000 weaklyHypermeth 2.2504e-03 0.99861908 weaklyHypermeth 4.8922e-02 1.00000 weaklyHypermeth 0.0157439 7.0325e-01 insignificant 1.00000000 insignificant 0.928023 0.8829861 0.0386456 13 0.7428930 0.9030598 -0.1601669 6.1777e-04 5.0064e-01 weaklyHypermeth 5.1480e-02 1.0000e+00 weaklyHypermeth 3.5017e-03 4.4545e-01 weaklyHypermeth 4.8557e-01 1.0000e+00 insignificant -0.1160609 0.00258093 weaklyHypometh 0.51208 insignificant 0.8387435 0.8829861 -0.04407344 13 0.6929363 0.9030598 -0.21012353 4.7753e-01 3.7411e-02 weaklyHypometh 1.00000000 5.1249e-01 insignificant 0.59167976 2.1999e-01 insignificant 1.00000 1.0000e+00 insignificant -0.1318047 3.8760e-03 weaklyHypometh 0.2350361 insignificant chr5 7095750 7096750 19122 ENSG00000200243 0.907571 100 5 0.7242857 183 5 0.5458333 84 5 0.871897 88 5 0.880000 99 5 0.8051671 197 5 0.831178 85 5 0.7407439 104 5 0.7755199 66 5 0.8603730 43 4 0.8356426 231 5 0.6666667 38 4 0.9013889 72 5 0.791190 46 5 0.7066993 78 5 0.6800000 35 3 0.6666667 7 0 0.915000 56 5 0.854163 96 5 0.8320764 157 5 0.928571 21 2 0.7640056 34 1 0.915556 58 5 0.571245 62 5 1.0000000 6 1 0.8754261 112 5 0.8952381 45 2 0.756944 45 5 0.8144338 83 5 0.8548421 131 5 0.9298589 120 5 0.823101 204 5 0.8319977 98 5 0.8277778 30 4 0.758369 115 5 0.733333 11 0 0.779466 134 5 0.6041449 117 5 0.884327 89 5 0.954902 61 5 0.9000000 34 3 0.9000000 30 2 0.875476 61 5 0.9091178 0.7274282 0.6595238 0.85528911 0.876923 0.762058 0.8307582 0.7353748 0.793164 0.8407874 0.8428187 0.6117216 0.8913309 0.789508 0.8379660 0.71208791 0.7654712 0.90384615 0.8506547 0.8397057 1.0000000 0.70825253 0.912943 0.806128 0.9016625 0.8695399 0.8899791 0.907204 0.8237727 0.8591671 0.9120243 0.820023 0.8129932 0.7619048 0.7669902 0.72161172 0.7477983 0.6948109 0.8886486 0.9472097 0.8901099 0.912088 0.882522 0 0.818231 0.862832 -0.03820949 5 0.7562032 0.8755708 -0.11936758 0.994441 0.03665917 weaklyHypometh 1 1.000000 insignificant 0.99830 2.2702e-02 weaklyHypometh 1 1.00000000 insignificant -0.0544987 0.1786005 lowCoverage 1.00000 lowCoverage 0.818231 0.7603960 0.0652917 5 0.7562032 0.7425796 0.01362360 2.7426e-02 9.5542e-01 weaklyHypermeth 3.9180e-01 1.0000000 insignificant 5.9840e-02 0.90579669 insignificant 8.9313e-01 1.00000 insignificant 0.03375503 4.2767e-01 lowCoverage 1.0000e+00 lowCoverage 0.818915 0.9127273 -0.0922247 5 0.8074439 0.9037744 -0.0963305 9.9440e-01 1.0175e-04 weaklyHypometh 1.0000e+00 2.2180e-02 weaklyHypometh 9.8388e-01 4.0773e-03 weaklyHypometh 1.0000e+00 4.5304e-01 insignificant -0.1133378 2.8391e-04 lowCoverage 0.0709763 lowCoverage 0.862832 0.7603960 0.1051863 5 0.8755708 0.7425796 0.13299118 9.2452e-05 0.99956390 weaklyHypermeth 1.7444e-03 1.00000 weaklyHypermeth 8.7861e-04 0.99770114 weaklyHypermeth 2.2528e-02 1.00000 weaklyHypermeth 0.0882537 8.2824e-02 lowCoverage 1.00000000 lowCoverage 0.862375 0.9127273 -0.0513494 5 0.8506849 0.9037744 -0.0530894 9.7067e-01 7.6408e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 8.9656e-01 2.0327e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0588392 0.11566290 lowCoverage 1.00000 lowCoverage 0.7609562 0.9127273 -0.15469193 5 0.7577622 0.9037744 -0.14601216 9.9988e-01 3.3288e-06 weaklyHypometh 1.00000000 1.3870e-04 weaklyHypometh 0.99810231 1.0981e-03 weaklyHypometh 1.00000 4.6227e-02 weaklyHypometh -0.1470929 6.0275e-03 lowCoverage 0.3013745 lowCoverage chr5 10336650 10337650 19141 CCT5 ENSG00000150753 0.030303 56 6 0.0185185 105 6 0.0333333 117 6 0.100000 19 3 0.000000 75 4 0.1121212 112 6 0.024984 114 6 0.0333333 74 6 0.0750000 65 6 0.0238095 77 6 0.0451252 176 6 0.0525031 90 6 0.0151515 148 6 NA 0 0 0.0233796 128 6 0.0185185 89 6 0.0321429 109 6 0.194444 22 3 0.017899 130 6 0.0047619 135 6 0.060606 60 6 0.0833333 9 0 0.012821 99 6 0.023810 33 4 0.0000000 6 0 0.0386508 177 6 0.0185185 34 5 0.020833 32 4 0.0379167 90 6 0.0252193 178 6 0.0061728 194 6 0.033670 161 6 0.0000000 63 6 0.0000000 112 6 0.000000 48 4 0.000000 11 0 0.051587 37 5 0.0000000 97 6 0.000000 74 6 0.000000 70 6 0.0000000 18 1 0.0555556 27 3 0.000000 3 0 0.0363636 0.0222222 0.0400000 0.12000000 0.000000 0.134545 0.0319165 0.0400000 0.062000 0.0285714 0.0541502 0.0497070 0.0181818 NA 0.0257222 0.02222222 0.0385714 0.15333333 0.0230583 0.0074286 0.0727273 0.06331428 0.015385 0.028571 0.0072039 0.0475810 0.0133333 0.015000 0.0479000 0.0302632 0.0074074 0.033131 0.0000000 0.0000000 0.0057143 0.00000000 0.0485714 0.0000000 0.0000000 0.0000000 0.0000000 0.040000 0.010000 0 0.029875 0.029823 0.00071247 6 0.0309387 0.0303715 0.00056714 0.504229 0.82873525 insignificant 1 1.000000 insignificant 0.27015 8.7703e-01 insignificant 1 1.00000000 insignificant 0.0148881 0.2500544 lowCoverage 1.00000 lowCoverage 0.029875 0.0054348 0.0203564 6 0.0309387 0.0062045 0.02473422 4.8814e-02 9.9195e-01 weaklyHypermeth 6.5085e-01 1.0000000 insignificant 2.0304e-02 0.99753240 weaklyHypermeth 3.6917e-01 1.00000 insignificant 0.03641947 1.5656e-02 lowCoverage 4.7767e-01 lowCoverage 0.029875 0.0052083 0.0228906 6 0.0309387 0.0057471 0.0251916 4.1104e-02 9.7728e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 9.6574e-03 9.9177e-01 weaklyHypermeth 9.6574e-01 1.0000e+00 insignificant 0.0339062 4.7746e-02 lowCoverage 1.0000000 lowCoverage 0.029823 0.0054348 0.0201420 6 0.0303715 0.0062045 0.02416709 6.2775e-02 0.99996979 insignificant 8.2598e-01 1.00000 insignificant 1.5889e-01 0.99998192 insignificant 1.0000e+00 1.00000 insignificant 0.0215314 7.3985e-02 lowCoverage 1.00000000 lowCoverage 0.029823 0.0052083 0.0224137 6 0.0303715 0.0057471 0.0246244 5.3988e-02 9.9966e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.9989e-02 9.9988e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0190181 0.18582859 lowCoverage 1.00000 lowCoverage 0.0054348 0.0052083 0.00030595 6 0.0062045 0.0057471 0.00045734 9.8350e-01 9.9831e-01 insignificant 1.00000000 1.0000e+00 insignificant 0.98772869 9.9908e-01 insignificant 1.00000 1.0000e+00 insignificant -0.0025132 8.6250e-01 lowCoverage 1.0000000 lowCoverage chr5 10629950 10630950 19171 ANKRD33B ENSG00000164236 0.802940 256 8 0.8568683 163 7 0.8358025 82 8 0.817325 222 7 0.504342 69 5 0.7652357 146 8 0.701087 84 4 0.7725553 235 8 0.7929630 77 8 0.7423435 88 8 0.7716252 196 8 0.7750000 38 3 0.8912353 179 9 0.810714 108 7 0.8092381 97 8 0.2500000 19 2 0.4872549 165 2 0.727274 223 8 0.774804 147 8 0.8722222 116 4 0.758488 63 7 0.9375000 48 3 0.761862 122 7 0.907828 43 3 0.8067873 42 3 0.8324199 176 8 0.6037267 83 7 0.486111 31 4 0.8045498 178 7 0.7351854 177 7 0.8569131 150 8 0.816887 124 8 0.6172588 136 8 0.6420504 78 8 0.682381 161 6 0.635417 47 2 0.603093 110 8 0.8020808 165 7 0.776564 185 7 0.862261 184 7 0.8547593 229 7 0.8682292 88 2 0.809661 171 7 0.8223553 0.8173722 0.7504587 0.85294174 0.749045 0.807509 0.6404885 0.8359951 0.658899 0.7319010 0.7895343 0.6309888 0.8506959 0.783093 0.8109830 0.52680944 0.5726570 0.66206342 0.7597013 0.7422389 0.7105359 0.95183486 0.813322 0.841257 0.8674499 0.7278580 0.6275115 0.716743 0.7954322 0.7677731 0.7717942 0.763987 0.4679697 0.5709038 0.6384215 0.56230887 0.5653100 0.6866470 0.8324289 0.8499919 0.8703596 0.808499 0.782034 3 0.832472 0.846403 -0.02402777 8 0.7661545 0.8012409 -0.03508634 0.901851 0.04180025 weaklyHypometh 1 1.000000 insignificant 0.94232 7.8429e-02 insignificant 1 1.00000000 insignificant -0.0376467 0.4576481 insignificant 1.00000 insignificant 0.832472 0.7302726 0.1074278 8 0.7661545 0.6235628 0.14259175 5.3487e-06 5.0064e-01 weaklyHypermeth 1.2439e-04 1.0000000 weaklyHypermeth 7.5379e-03 0.41210513 weaklyHypermeth 1.5805e-01 1.00000 insignificant 0.07432796 1.1964e-01 insignificant 1.0000e+00 insignificant 0.832472 0.8996499 -0.0406183 7 0.7661545 0.7980815 -0.0319270 9.7506e-01 2.4284e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.3196e-01 3.6045e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0962534 2.0879e-02 weaklyHypometh 0.8351521 insignificant 0.846403 0.7302726 0.1493813 8 0.8012409 0.6235628 0.17767810 2.9622e-04 0.86317302 weaklyHypermeth 5.2897e-03 1.00000 weaklyHypermeth 5.2176e-02 0.97118910 insignificant 8.0270e-01 1.00000 insignificant 0.1119746 2.9984e-02 weaklyHypermeth 0.71391036 insignificant 0.846403 0.8996499 -0.0214960 7 0.8012409 0.7980815 0.0031594 5.2458e-01 1.4142e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.2097e-01 2.9090e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0586067 0.16670883 insignificant 1.00000 insignificant 0.7302726 0.8996499 -0.17432726 7 0.6235628 0.7980815 -0.17451871 9.9511e-01 8.6568e-03 weaklyHypometh 1.00000000 1.4926e-01 insignificant 0.99358579 2.3914e-02 weaklyHypometh 1.00000 4.7827e-01 insignificant -0.1705814 1.1914e-03 weaklyHypometh 0.0816612 weaklyHypometh chr5 14184450 14185450 19232 DNAH5 ENSG00000039139 0.917778 107 5 0.8698039 94 5 0.5704627 91 5 0.857576 62 5 0.821429 67 5 0.7858333 153 5 0.859037 106 5 0.8637124 75 5 0.8207206 95 5 0.9475000 77 5 0.8765432 125 6 0.9173382 71 5 0.9378070 102 5 NA 0 0 0.9528595 85 5 0.9633333 54 5 0.8933333 47 5 0.958947 60 5 0.972064 153 5 0.9580220 151 5 0.899008 68 5 0.9777778 33 5 0.932540 122 5 0.937179 68 5 0.9846154 25 1 0.9583333 122 5 0.8797078 66 5 0.903247 62 5 0.9011785 51 5 0.9807692 97 5 0.8529928 115 5 0.945166 223 5 0.9121212 118 5 0.8002646 75 5 0.630952 91 6 0.888889 37 5 0.750427 69 6 0.9324888 135 5 0.951609 125 5 0.935519 124 5 0.9777778 50 5 0.9338936 156 5 0.886364 81 5 0.9176227 0.8703329 0.6163475 0.83323467 0.986379 0.939209 0.9343912 0.9384615 0.822563 0.9472481 0.9121693 0.9014856 0.9348756 NA 0.9514098 0.96271318 0.8998450 0.96026928 0.9655876 0.9554255 0.8820986 0.97622739 0.929827 0.926762 0.9835420 0.9470930 0.8838984 0.906116 0.8820202 0.9753131 0.9220916 0.932711 0.9059901 0.9578811 0.7448505 0.85736434 0.8992487 0.9183368 0.9495736 0.9368260 0.9762274 0.935848 0.965328 5 0.903662 0.927757 -0.02231277 5 0.8603996 0.9255195 -0.06511985 0.985374 0.03871646 weaklyHypometh 1 1.000000 insignificant 0.93961 9.3677e-02 insignificant 1 1.00000000 insignificant -0.0481078 0.0617796 lowCoverage 1.00000 lowCoverage 0.903662 0.8571429 0.0218735 5 0.8603996 0.7764352 0.08396442 3.1205e-02 6.0507e-01 weaklyHypermeth 4.3951e-01 1.0000000 insignificant 3.4137e-01 0.19313833 insignificant 1.0000e+00 1.00000 insignificant 0.06207789 2.6909e-01 lowCoverage 1.0000e+00 lowCoverage 0.903662 0.9477612 -0.0411038 5 0.8603996 0.8740349 -0.0136353 8.2128e-01 4.8100e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.3541e-01 4.4069e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0557640 4.5672e-02 lowCoverage 1.0000000 lowCoverage 0.927757 0.8571429 0.0427558 5 0.9255195 0.7764352 0.14908427 1.6157e-03 0.84483543 weaklyHypermeth 2.5646e-02 1.00000 weaklyHypermeth 6.3811e-02 0.46675365 insignificant 9.6684e-01 1.00000 insignificant 0.1101857 6.7045e-02 lowCoverage 1.00000000 lowCoverage 0.927757 0.9477612 -0.0191683 5 0.9255195 0.8740349 0.0514845 5.9965e-01 5.7292e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 6.0047e-01 9.9394e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0076562 0.70054640 lowCoverage 1.00000 lowCoverage 0.8571429 0.9477612 -0.05664420 5 0.7764352 0.8740349 -0.09759974 7.8648e-01 5.0559e-02 insignificant 1.00000000 6.6267e-01 insignificant 0.64517999 2.1302e-01 insignificant 1.00000 1.0000e+00 insignificant -0.1178419 5.4924e-02 insignificant 1.0000000 insignificant chr5 20820350 20821350 19386 ENSG00000214132 0.786303 340 9 0.8564199 167 9 0.8236461 104 9 0.781951 207 9 0.838861 74 8 0.7605604 293 9 0.633240 132 8 0.6518980 132 9 0.7096191 98 8 0.8437809 166 9 0.7870242 295 9 0.7488456 65 7 0.7908640 151 9 0.854167 15 1 0.7957212 147 8 0.6833333 48 6 0.6852760 94 7 0.760909 201 9 0.783783 182 9 0.8280387 338 9 0.839358 60 2 0.7038721 91 8 0.850677 226 9 0.577513 80 6 0.8283832 84 7 0.7950794 239 9 0.8437710 67 5 0.704113 78 8 0.7697737 136 9 0.7575434 207 9 0.8394534 179 9 0.851765 422 9 0.7866373 165 9 0.7027318 165 9 0.707598 203 9 0.767781 99 7 0.843773 104 9 0.8326953 205 9 0.818076 316 9 0.833062 331 9 0.7302116 273 9 0.8071270 305 9 0.851456 281 9 0.8082771 0.8461475 0.8269922 0.81556980 0.751601 0.777266 0.7740136 0.6898344 0.702208 0.8664746 0.7924930 0.7332164 0.8118036 0.815725 0.8399452 0.83993325 0.7751521 0.79004596 0.8033026 0.8182261 0.8592818 0.74715953 0.855239 0.717652 0.8365992 0.7771647 0.8717450 0.723690 0.7632899 0.7827732 0.8252477 0.800234 0.7299535 0.7432186 0.7279872 0.75746258 0.8437723 0.8183231 0.8553133 0.8450180 0.7918232 0.819925 0.870417 4 0.790705 0.789727 0.00597925 9 0.8115528 0.8403443 -0.02879153 0.485912 0.80120996 insignificant 1 1.000000 insignificant 0.72436 5.8989e-01 insignificant 1 1.00000000 insignificant -0.0098965 0.7311476 insignificant 1.00000 insignificant 0.790253 0.7534538 0.0357236 9 0.7644410 0.8036254 -0.03918437 9.3811e-03 7.7539e-01 weaklyHypermeth 1.4658e-01 1.0000000 insignificant 1.2124e-01 0.62148897 insignificant 1.0000e+00 1.00000 insignificant -0.00332403 9.1026e-01 insignificant 1.0000e+00 insignificant 0.790511 0.8180611 -0.0278387 9 0.7825609 0.8235794 -0.0410185 9.9769e-01 3.2919e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9990e-01 3.2754e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0377743 1.7559e-01 insignificant 1.0000000 insignificant 0.789361 0.7534538 0.0345914 9 0.8212638 0.8036254 0.01763837 6.2487e-02 0.76790600 insignificant 8.2598e-01 1.00000 insignificant 1.6794e-01 0.62465281 insignificant 1.0000e+00 1.00000 insignificant 0.0065724 8.5130e-01 insignificant 1.00000000 insignificant 0.789276 0.8180611 -0.0349743 9 0.8157819 0.8235794 -0.0077975 9.9993e-01 1.3369e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9165e-01 2.8417e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0278778 0.39753219 insignificant 1.00000 insignificant 0.7534538 0.8179402 -0.06695457 9 0.8036254 0.8088777 -0.00525230 9.9937e-01 3.5506e-03 weaklyHypometh 1.00000000 7.1012e-02 weaklyHypometh 0.98911341 1.2771e-01 insignificant 1.00000 1.0000e+00 insignificant -0.0344503 3.1185e-01 insignificant 1.0000000 insignificant chr5 33390650 33391650 19566 ENSG00000210335 0.796662 546 18 0.7588731 378 17 0.7276879 253 18 0.742292 274 16 0.730633 147 15 0.7723731 634 18 0.734229 208 16 0.7723033 243 16 0.7493007 178 17 0.7940960 252 18 0.8217870 593 18 0.6825359 137 14 0.8002918 337 18 0.874868 47 6 0.8143823 342 18 0.8184579 87 6 0.7360441 138 13 0.824421 356 17 0.846600 326 18 0.7950437 520 18 0.872474 89 10 0.7142592 156 12 0.755196 326 18 0.889907 93 9 0.6894345 89 9 0.7384771 465 18 0.8325606 162 13 0.622222 35 2 0.7818695 237 14 0.8144897 532 18 0.8294959 427 18 0.788830 732 18 0.7521529 310 16 0.6804100 291 18 0.733480 357 18 0.649799 123 8 0.689582 137 9 0.7505455 446 18 0.817396 448 17 0.804477 523 18 0.7595665 392 18 0.8207201 336 16 0.748165 466 17 0.8108958 0.7768974 0.6851135 0.76306022 0.770303 0.789284 0.7721228 0.8216505 0.764309 0.8185272 0.8070175 0.6718490 0.8379132 0.808380 0.8361405 0.82363381 0.7785359 0.84391144 0.8371981 0.7833486 0.8586833 0.73655653 0.780671 0.885398 0.7029885 0.7679849 0.7903726 0.714422 0.7930816 0.8428232 0.8414077 0.786144 0.7436502 0.7090554 0.7075883 0.68718952 0.7108540 0.7663094 0.8265224 0.8257352 0.7940275 0.837704 0.784866 4 0.793696 0.814239 -0.00473041 18 0.8118156 0.8127646 -0.00094893 0.910344 0.76126202 insignificant 1 1.000000 insignificant 0.94413 5.0285e-01 insignificant 1 1.00000000 insignificant 0.0022095 0.9302828 insignificant 1.00000 insignificant 0.793558 0.7481971 0.0572776 18 0.7920067 0.7374548 0.05455192 9.4107e-07 1.0000e+00 weaklyHypermeth 2.3527e-05 1.0000000 weaklyHypermeth 3.7658e-05 0.99971836 weaklyHypermeth 1.5063e-03 1.00000 weaklyHypermeth 0.07031596 6.7612e-03 weaklyHypermeth 2.8450e-01 insignificant 0.793558 0.7856813 -0.0158740 18 0.8024064 0.7668042 0.0356022 9.0456e-01 3.4913e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.5817e-01 2.2144e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0104208 5.8721e-01 insignificant 1.0000000 insignificant 0.814016 0.7481971 0.0620075 18 0.7930556 0.7374548 0.05560074 2.5603e-04 0.99999894 weaklyHypermeth 4.6551e-03 1.00000 weaklyHypermeth 1.4375e-03 0.99999779 weaklyHypermeth 3.4226e-02 1.00000 weaklyHypermeth 0.0681064 2.8857e-02 weaklyHypermeth 0.71391036 insignificant 0.814183 0.7856813 -0.0132784 18 0.8034028 0.7668042 0.0365986 8.6793e-01 2.8156e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.8807e-01 5.4621e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0126303 0.64806726 insignificant 1.00000 insignificant 0.7480457 0.7859454 -0.07836390 18 0.7228690 0.7964491 -0.07358012 9.9980e-01 3.7048e-07 weaklyHypometh 1.00000000 1.7642e-05 weaklyHypometh 0.99930626 6.5785e-06 weaklyHypometh 1.00000 6.5785e-04 weaklyHypometh -0.0807368 6.4883e-03 weaklyHypometh 0.3089673 insignificant chr5 34218750 34219750 19579 ENSG00000215159 0.736095 291 5 0.8361111 98 6 0.7867802 105 5 0.867849 364 6 0.830556 35 5 0.8577560 257 5 0.979167 45 1 0.7935305 69 5 0.7777778 35 3 0.9413194 64 3 0.8977644 212 6 0.6000000 20 1 0.9144444 75 3 0.934000 36 1 0.8782051 54 3 0.4833333 24 1 0.7407407 19 1 0.837099 167 5 0.885455 63 3 0.8810887 144 5 0.723214 43 3 0.8616071 61 1 0.896769 71 3 0.812179 80 6 0.8155844 45 4 0.8559700 179 6 0.8573718 69 3 0.931973 22 1 0.8315563 113 3 0.8937299 190 6 0.7608953 195 6 0.908964 369 6 0.7053039 111 5 0.8080357 86 4 0.896278 104 6 1.000000 16 1 0.660173 96 6 0.9197844 164 6 0.868217 200 5 0.908649 259 6 0.8931067 334 6 0.7927350 55 3 0.876010 282 6 0.8836903 0.8781145 0.7779975 0.89146966 0.865993 0.884841 0.9040404 0.8292521 0.888889 0.9314254 0.8409605 0.7565657 0.8904377 0.910808 0.9441157 0.82760943 0.6812570 0.88813080 0.8950904 0.9510288 0.8005051 0.90331890 0.889271 0.876819 0.9079890 0.8801865 0.8269068 0.889924 0.8646340 0.9032122 0.8821165 0.870607 0.8702976 0.8407588 0.8891013 0.91658075 0.8169575 0.9069708 0.9113840 0.9333187 0.9147148 0.930771 0.922131 1 0.874598 0.879610 0.00052864 5 0.8614410 0.8068841 0.05455685 0.415963 0.78574347 insignificant 1 1.000000 insignificant 0.53206 8.5160e-01 insignificant 1 1.00000000 insignificant -0.0228643 0.4759714 lowCoverage 1.00000 lowCoverage 0.874481 0.8700173 0.0053009 5 0.8734871 0.7347186 0.13876844 7.8612e-01 6.7199e-01 insignificant 1.0000e+00 1.0000000 insignificant 2.6987e-01 0.68613045 insignificant 1.0000e+00 1.00000 insignificant -0.00864230 8.8867e-01 lowCoverage 1.0000e+00 lowCoverage 0.874191 0.9283186 -0.0349366 5 0.8524016 0.8885339 -0.0361323 9.6327e-01 4.5277e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 5.9103e-01 1.6367e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0447898 1.9159e-01 lowCoverage 1.0000000 lowCoverage 0.881237 0.8700173 0.0056589 5 0.8384059 0.7347186 0.10368722 2.5591e-01 0.75731888 insignificant 1.0000e+00 1.00000 insignificant 3.2945e-01 0.81893578 insignificant 1.0000e+00 1.00000 insignificant 0.0142220 8.0934e-01 lowCoverage 1.00000000 lowCoverage 0.881690 0.9283186 -0.0348894 5 0.8670291 0.8885339 -0.0215048 9.6093e-01 1.6623e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 4.8377e-01 5.8924e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0219255 0.43012294 lowCoverage 1.00000 lowCoverage 0.8730435 0.9283186 -0.03835533 5 0.8571718 0.8885339 -0.03136216 9.5802e-01 3.9136e-02 weaklyHypometh 1.00000000 5.2886e-01 insignificant 0.92538461 1.6296e-01 insignificant 1.00000 1.0000e+00 insignificant -0.0361475 5.4967e-01 lowCoverage 1.0000000 lowCoverage chr5 34599850 34600850 19587 ENSG00000222261 0.885837 258 7 0.6460456 286 7 0.7541612 169 7 0.612573 104 3 0.723834 57 5 0.8202409 221 7 0.864293 194 7 0.8561433 141 7 0.7231283 139 7 0.7863474 122 7 0.8555369 259 7 0.7633690 86 7 0.7637598 144 7 0.909091 12 1 0.8530987 102 7 0.8592437 61 5 0.7728652 74 7 0.741199 107 6 0.774792 176 7 0.7952015 240 7 0.892387 130 7 0.8000000 23 2 0.853655 190 7 0.758941 87 7 0.8685714 90 2 0.7802566 268 7 0.8199994 74 7 0.851020 65 7 0.7867769 206 7 0.7948557 276 7 0.8368186 287 7 0.867844 297 7 0.8498806 213 7 0.8859599 174 7 0.702703 210 4 0.839362 120 4 0.782835 134 6 0.8793673 252 7 0.737462 191 5 0.693709 205 7 0.6897580 117 5 0.6607837 219 7 0.769393 96 5 0.8689511 0.6802631 0.7631212 0.82144261 0.739435 0.832095 0.8844727 0.8838019 0.746748 0.7537312 0.8625546 0.8198428 0.8004075 0.862801 0.8007080 0.84994058 0.7224662 0.70576549 0.8231184 0.8182908 0.9457962 0.59393939 0.837249 0.743912 0.7420338 0.8201183 0.8366173 0.937229 0.7870934 0.8031953 0.8375329 0.872201 0.8888885 0.8711680 0.6578630 0.90574771 0.8167193 0.9209845 0.7343059 0.7095770 0.6290217 0.690605 0.779068 3 0.774729 0.800803 -0.01790435 7 0.7940392 0.8170916 -0.02305236 0.972144 0.21360124 insignificant 1 1.000000 insignificant 0.98533 2.0738e-01 insignificant 1 1.00000000 insignificant -0.0378892 0.0828594 insignificant 1.00000 insignificant 0.774729 0.8301544 -0.0647265 7 0.7940392 0.8396247 -0.04558541 4.4483e-01 8.9139e-06 weaklyHypometh 1.0000e+00 0.0029713 weaklyHypometh 8.9416e-01 0.00185223 weaklyHypometh 1.0000e+00 0.30870 insignificant -0.03531323 3.1592e-01 insignificant 1.0000e+00 insignificant 0.774729 0.6150121 0.1440056 5 0.7940392 0.6833352 0.1107040 4.4930e-07 6.8956e-01 weaklyHypermeth 8.9860e-05 1.0000e+00 weaklyHypermeth 7.2004e-04 8.5348e-01 weaklyHypermeth 1.2001e-01 1.0000e+00 insignificant 0.0778170 1.1313e-02 weaklyHypermeth 0.6310057 insignificant 0.800803 0.8301544 -0.0419400 7 0.8170916 0.8396247 -0.02253306 5.5117e-01 0.00039811 weaklyHypometh 1.0000e+00 0.13270 insignificant 7.4868e-01 0.14366949 insignificant 1.0000e+00 1.00000 insignificant 0.0025760 9.3589e-01 insignificant 1.00000000 insignificant 0.800803 0.6150121 0.1576264 5 0.8170916 0.6833352 0.1337564 2.6491e-06 7.6145e-01 weaklyHypermeth 4.4151e-04 1.0000e+00 weaklyHypermeth 7.7568e-04 9.5125e-01 weaklyHypermeth 1.2928e-01 1.0000e+00 insignificant 0.1157062 0.00119607 weaklyHypermeth 0.39869 insignificant 0.8295558 0.6154776 0.22118456 5 0.7971716 0.7229183 0.07425325 1.6890e-07 9.6320e-01 hypermethylated 0.00016890 1.0000e+00 hypermethylated 0.00088471 9.3743e-01 hypermethylated 0.44235 1.0000e+00 insignificant 0.1131302 1.0137e-02 weaklyHypermeth 0.3889085 insignificant chr5 36780050 36781050 19655 SLC1A3 ENSG00000079215 0.056280 881 23 0.0226247 1766 23 0.0622233 1424 23 0.018866 866 18 0.013920 1326 23 0.0551368 1839 26 0.030548 1332 23 0.0261228 1097 23 0.0207432 1463 25 0.0301818 1270 23 0.0740041 1278 23 0.0183105 1204 23 0.0229785 966 23 0.026713 812 18 0.0287433 1695 23 0.0379627 1275 25 0.1260504 586 11 0.094882 1039 21 0.091102 1573 23 0.0955616 1161 19 0.088158 455 19 0.0000000 547 16 0.045244 1050 23 0.017133 888 24 0.0223886 336 15 0.0235591 1870 23 0.0090877 1750 25 0.020314 649 23 0.0097278 1292 24 0.0832787 2598 25 0.0595176 1925 23 0.018921 1384 23 0.0059242 1272 23 0.0035303 727 23 0.094737 460 19 0.045455 95 12 0.090397 1173 23 0.0447185 1600 23 0.029449 1511 18 0.031438 1080 23 0.0188943 958 18 0.0400817 890 17 0.040633 991 18 0.0103855 0.0099510 0.0116442 0.01646493 0.007117 0.015872 0.0143727 0.0110411 0.011248 0.0126502 0.0195206 0.0098365 0.0084233 0.011263 0.0131741 0.01655436 0.0240725 0.01057395 0.0078946 0.0117969 0.0166566 0.00434489 0.026187 0.013687 0.0108578 0.0095076 0.0030632 0.010447 0.0072333 0.0122349 0.0092585 0.011358 0.0064356 0.0020075 0.0080249 0.00012512 0.0047756 0.0051348 0.0105934 0.0111497 0.0108468 0.010382 0.016162 16 0.034162 0.019207 0.01482529 23 0.0943002 0.0435358 0.05076444 0.107748 0.95942850 insignificant 1 1.000000 insignificant 0.34781 9.9324e-01 insignificant 1 1.00000000 insignificant 0.0145368 0.2052349 insignificant 1.00000 insignificant 0.034166 0.0080736 0.0335175 23 0.1037303 0.1008672 0.00286302 4.7236e-02 5.4581e-01 weaklyHypermeth 6.4707e-01 1.0000000 insignificant 2.4183e-03 0.76385152 weaklyHypermeth 5.7577e-02 1.00000 weaklyHypermeth 0.00018745 9.9182e-01 insignificant 1.0000e+00 insignificant 0.033486 0.0366483 0.0095146 19 0.0355874 0.0303213 0.0052661 3.5161e-01 3.6140e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.9057e-01 9.3273e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0155484 7.5126e-02 insignificant 1.0000000 insignificant 0.019141 0.0082598 0.0147053 24 0.0355919 0.1298715 -0.09427965 8.0743e-02 0.82530894 insignificant 1.0000e+00 1.00000 insignificant 2.4590e-01 0.57880157 insignificant 1.0000e+00 1.00000 insignificant -0.0143494 4.5249e-01 insignificant 1.00000000 insignificant 0.018981 0.0366483 -0.0084793 19 0.0196895 0.0303213 -0.0106318 8.1089e-01 5.1393e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.1755e-01 9.4962e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0010115 0.91533635 insignificant 1.00000 insignificant 0.0069601 0.0366483 -0.03263847 19 0.0110407 0.0303213 -0.01928063 9.8309e-01 8.6775e-04 weaklyHypometh 1.00000000 2.1937e-02 weaklyHypometh 0.99746932 2.8348e-01 insignificant 1.00000 1.0000e+00 insignificant 0.0153609 3.9168e-01 insignificant 1.0000000 insignificant chr5 37873250 37874250 19668 GDNF ENSG00000168621 0.020181 483 16 0.0258154 533 21 0.0752577 634 21 0.012897 267 6 0.010239 556 21 0.0348343 601 22 0.010503 715 21 0.0067034 519 21 0.0256618 666 21 0.0151138 820 17 0.0216534 729 21 0.0261067 845 17 0.0092794 568 21 0.107438 162 9 0.0163470 649 17 0.0167523 765 17 0.0886177 538 17 0.000000 411 8 0.034779 352 17 0.0282224 447 22 0.048332 226 18 0.0012285 277 9 0.075502 594 17 0.046276 304 19 0.0035714 185 6 0.0096922 708 21 0.0158582 349 20 0.061978 327 16 0.0181562 369 17 0.0296163 695 21 0.0124907 603 21 0.058677 636 21 0.0000000 476 21 0.0065984 505 17 0.075000 170 9 0.000000 132 15 0.037732 197 17 0.0240642 542 21 0.026252 575 17 0.010486 503 16 0.0018382 403 13 0.0090223 423 12 0.015464 441 8 0.0179993 0.0175258 0.0905071 0.01148006 0.015917 0.015392 0.0087448 0.0074262 0.021966 0.0176410 0.0139658 0.0158068 0.0028297 0.028884 0.0150362 0.01295095 0.0165565 0.00025645 0.0162835 0.0184335 0.0264219 0.00347877 0.035930 0.031867 0.0050073 0.0097572 0.0246268 0.017972 0.0185847 0.0053770 0.0065683 0.021445 0.0000000 0.0094555 0.0638455 0.00000000 0.0205381 0.0042694 0.0111161 0.0054178 0.0047175 0.022570 0.014426 6 0.022735 0.019154 0.00287573 21 0.0247759 0.0355243 -0.01074838 0.352865 0.95947252 insignificant 1 1.000000 insignificant 0.35190 9.1783e-01 insignificant 1 1.00000000 insignificant -0.0024615 0.8012818 insignificant 1.00000 insignificant 0.022735 0.0064293 0.0193552 21 0.0247759 0.0315253 -0.00674938 1.6553e-03 9.9997e-01 weaklyHypermeth 2.9040e-02 1.0000000 weaklyHypermeth 5.8827e-04 0.99988370 weaklyHypermeth 1.7826e-02 1.00000 weaklyHypermeth 0.00542105 6.9795e-01 insignificant 1.0000e+00 insignificant 0.022739 0.0106610 0.0066119 13 0.0259021 0.0141013 0.0118008 6.3592e-02 9.9169e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.1750e-02 1.0000e+00 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.0167076 3.7379e-02 weaklyHypermeth 1.0000000 insignificant 0.019154 0.0064293 0.0137709 21 0.0355243 0.0315253 0.00399900 2.9817e-03 0.99736674 weaklyHypermeth 4.4503e-02 1.00000 weaklyHypermeth 1.6203e-02 0.99971767 weaklyHypermeth 2.7970e-01 1.00000 insignificant 0.0078826 5.8633e-01 insignificant 1.00000000 insignificant 0.018800 0.0106610 0.0051796 13 0.0241520 0.0141013 0.0100507 1.5953e-01 9.8224e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.4183e-01 9.9983e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0191691 0.03681416 weaklyHypermeth 1.00000 insignificant 0.0059406 0.0106610 -0.00483444 13 0.0102310 0.0141013 -0.00387033 9.7652e-01 6.3712e-01 insignificant 1.00000000 1.0000e+00 insignificant 0.99709436 9.4492e-01 insignificant 1.00000 1.0000e+00 insignificant 0.0112866 4.0296e-01 insignificant 1.0000000 insignificant chr5 38706850 38707850 19689 LIFR ENSG00000113594 0.771429 97 4 0.8388460 130 5 0.6650000 33 4 0.865913 118 4 0.811818 46 5 0.7932832 77 4 0.720658 61 5 0.8333333 43 5 0.6250000 13 0 0.8333333 12 0 0.7418767 112 5 0.7833333 22 1 0.7978283 46 5 0.747619 27 4 0.8000000 32 3 0.4333333 19 1 0.2592593 27 1 0.654532 72 4 0.820000 28 5 0.8750000 33 5 1.000000 13 1 NA 0 0 0.835673 68 4 0.876190 26 3 0.7800000 57 4 0.9200000 57 5 0.9600000 20 3 0.766667 32 4 0.9400000 76 4 0.8733333 42 4 0.8833333 62 4 0.904762 53 5 0.7575724 125 5 0.7200000 26 3 0.704444 29 2 0.920000 21 3 0.691818 80 5 0.6990476 48 5 0.849167 114 5 0.720476 74 4 0.7666667 119 5 0.7666667 31 5 0.794031 150 5 0.8760504 0.8827226 0.8264706 0.93651850 0.883021 0.888162 0.7656739 0.8888889 0.759342 0.8529412 0.8040783 0.7990196 0.7460710 0.746499 0.7385621 0.48529412 NA 0.75543946 0.8372549 0.9191176 0.9682353 NA 0.873667 0.894958 0.9029412 0.9647059 0.9411765 0.808824 0.9558824 0.8941176 0.8598039 0.932773 0.8039463 0.7544118 0.7666667 0.88235294 0.7614973 0.8466387 0.9236520 0.8565826 0.8970588 0.862745 0.884024 0 0.817748 0.905138 -0.07309574 4 0.7784289 0.8701515 -0.09172254 0.999628 0.00175843 lowCoverage 1 0.351687 lowCoverage 0.99986 7.7908e-04 lowCoverage 1 0.19476927 lowCoverage -0.1518810 0.0007347 lowCoverage 0.36735 lowCoverage 0.817748 0.7416413 0.0530876 5 0.7784289 0.7119318 0.06649718 8.6031e-03 8.3887e-01 weaklyHypermeth 1.3876e-01 1.0000000 insignificant 1.6133e-01 0.42654128 insignificant 1.0000e+00 1.00000 insignificant -0.01524399 7.6054e-01 lowCoverage 1.0000e+00 lowCoverage 0.817748 0.8934426 -0.0459688 5 0.7784289 0.7943515 -0.0159225 6.3712e-01 5.8829e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 2.7696e-01 1.8716e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0458316 2.6344e-01 lowCoverage 1.0000000 lowCoverage 0.905138 0.7416413 0.1392231 4 0.8701515 0.7119318 0.15821973 1.9651e-06 0.99971762 lowCoverage 5.1712e-05 1.00000 lowCoverage 2.8871e-03 0.97985376 lowCoverage 6.1427e-02 1.00000 lowCoverage 0.1366370 9.7769e-03 lowCoverage 0.36210736 lowCoverage 0.905138 0.8934426 0.0229331 4 0.8701515 0.7943515 0.0758000 1.1673e-03 2.3576e-01 lowCoverage 8.3377e-02 1.0000e+00 lowCoverage 3.8845e-03 3.6850e-01 lowCoverage 4.8557e-01 1.0000e+00 lowCoverage 0.1060493 0.00442704 lowCoverage 0.55338 lowCoverage 0.7416413 0.8934426 -0.11668935 5 0.7119318 0.7943515 -0.08241972 7.8865e-01 1.0708e-04 weaklyHypometh 1.00000000 3.4542e-03 weaklyHypometh 0.60626408 4.4990e-02 weaklyHypometh 1.00000 7.8929e-01 insignificant -0.0305876 4.8054e-01 lowCoverage 1.0000000 lowCoverage chr5 38844150 38845150 19694 LIFR ENSG00000113594 0.915094 644 12 0.8468895 230 11 0.8857207 225 12 0.948729 639 12 0.890972 77 9 0.9142730 563 12 0.970588 201 12 0.9021325 252 12 0.8825402 177 12 0.9552033 168 12 0.9414766 342 12 0.9401144 108 9 0.8966804 222 12 NA 0 0 0.9629525 267 12 0.9763889 102 8 0.8511769 179 12 0.938806 673 12 0.941727 176 8 0.9245158 399 12 0.887500 53 5 0.8740718 259 12 0.918921 250 12 0.862356 128 12 0.9118208 163 12 0.9584412 418 12 0.8760582 149 12 0.917659 77 7 0.9490476 229 12 0.9399211 377 12 0.9213458 247 12 0.884120 545 12 0.9147187 265 10 0.9554398 201 12 0.850244 241 9 0.915538 174 11 0.947350 144 8 0.9664603 348 12 0.966387 802 12 0.973510 706 12 0.9532269 887 12 0.9415358 664 12 0.956415 802 12 0.9286039 0.9058910 0.9178021 0.93652132 0.945761 0.926636 0.9609948 0.9254452 0.906506 0.9207440 0.9432150 0.9277996 0.9337681 NA 0.9451330 0.97893004 0.8663996 0.94009938 0.9460173 0.9161623 0.8083951 0.90744380 0.929074 0.869935 0.9091745 0.9479492 0.8761199 0.948325 0.9669982 0.9506924 0.9126157 0.916729 0.9297266 0.9465055 0.9224161 0.91520116 0.9342406 0.9721260 0.9692421 0.9709483 0.9573397 0.935554 0.963383 8 0.928242 0.917789 0.01274528 12 0.9265870 0.9092883 0.01729870 0.013415 0.97433792 weaklyHypermeth 1 1.000000 insignificant 0.23351 4.4413e-01 insignificant 1 1.00000000 insignificant 0.0118763 0.3531252 insignificant 1.00000 insignificant 0.928242 0.9388201 -0.0057173 12 0.9265870 0.9262027 0.00038433 3.0301e-01 1.7727e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant 9.5557e-01 0.00168134 weaklyHypometh 1.0000e+00 0.30870 insignificant -0.00464345 8.1626e-01 insignificant 1.0000e+00 insignificant 0.928242 0.9583010 -0.0316383 12 0.9265870 0.9584236 -0.0318366 9.9978e-01 6.3282e-04 weaklyHypometh 1.0000e+00 7.9103e-02 weaklyHypometh 9.9271e-01 1.3680e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0379001 1.4199e-03 weaklyHypometh 0.2028473 insignificant 0.917789 0.9388201 -0.0166211 12 0.9092883 0.9262027 -0.01691437 8.5785e-01 0.04168518 weaklyHypometh 1.0000e+00 1.00000 insignificant 9.9655e-01 0.03246006 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.0165198 4.2183e-01 insignificant 1.00000000 insignificant 0.917789 0.9583010 -0.0406479 12 0.9092883 0.9584236 -0.0491353 9.9999e-01 5.4371e-04 weaklyHypometh 1.0000e+00 1.8124e-01 insignificant 9.5365e-01 2.0540e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0497764 0.00029350 weaklyHypometh 0.29350 insignificant 0.9388201 0.9583010 -0.02286179 12 0.9262027 0.9584236 -0.03222092 5.4389e-01 3.3818e-01 insignificant 1.00000000 1.0000e+00 insignificant 0.02905670 9.9160e-01 inconclusive 1.00000 1.0000e+00 insignificant -0.0332566 1.1601e-01 insignificant 1.0000000 insignificant chr5 39464650 39465650 19722 DAB2 ENSG00000153071 0.677241 245 6 0.6532751 204 9 0.7382014 69 6 0.700602 222 6 0.699443 124 6 0.7620614 106 4 0.795265 119 9 0.7100223 113 9 0.7430556 54 5 0.7965368 52 6 0.7575667 206 9 0.8162698 57 6 0.8446871 125 6 0.805298 101 6 0.7377232 108 6 0.9126984 46 5 0.7443956 64 3 0.588313 313 8 0.804377 105 4 0.7067916 123 5 0.810417 65 8 0.8888889 29 2 0.786688 147 6 0.774425 61 4 0.8274166 119 6 0.6770833 106 5 0.8699295 56 4 0.815152 38 2 0.7408636 185 6 0.7700515 120 4 0.9144523 133 7 0.784913 108 4 0.7189377 148 4 0.7282717 155 6 0.695238 97 9 0.333333 3 0 0.676694 107 6 0.7710744 127 4 0.744691 179 6 0.848179 185 6 0.6407944 198 6 0.6607034 320 6 0.765230 176 6 0.8181307 0.8369846 0.7302102 0.82084797 0.882532 0.779301 0.7693821 0.8093213 0.843750 0.8320802 0.7840445 0.7282581 0.8658237 0.804147 0.8789160 0.93295739 0.7691872 0.82517078 0.8280702 0.8176308 0.8810307 0.95614035 0.851218 0.771120 0.8132201 0.8201754 0.8451337 0.833333 0.8308652 0.7826405 0.8791307 0.829129 0.5757300 0.5455151 0.5488722 0.32532059 0.5565326 0.7961153 0.8422926 0.8573841 0.7933647 0.812593 0.816387 2 0.801332 0.851757 -0.02294492 5 0.7201115 0.7615303 -0.04141882 0.609735 0.06125924 insignificant 1 1.000000 insignificant 0.83562 2.6541e-02 weaklyHypometh 1 1.00000000 insignificant -0.0553320 0.0355650 lowCoverage 1.00000 lowCoverage 0.802834 0.5635793 0.2674736 4 0.7666252 0.6909844 0.07564088 3.0291e-08 2.7125e-01 lowCoverage 8.4142e-07 1.0000000 lowCoverage 4.4211e-03 0.44960826 lowCoverage 1.0282e-01 1.00000 lowCoverage 0.09576642 2.0844e-01 lowCoverage 1.0000e+00 lowCoverage 0.801332 0.7977316 0.0184119 6 0.7201115 0.6320563 0.0880552 1.1659e-01 5.4395e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.7233e-01 5.5365e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0177717 6.8002e-01 insignificant 1.0000000 insignificant 0.852234 0.5635793 0.2838734 4 0.7636267 0.6909844 0.07264234 7.2105e-06 0.85751760 lowCoverage 1.7168e-04 1.00000 lowCoverage 4.0222e-03 0.97070904 lowCoverage 8.2087e-02 1.00000 lowCoverage 0.1510984 6.9507e-02 lowCoverage 1.00000000 lowCoverage 0.851757 0.7977316 0.0464695 5 0.7615303 0.6320563 0.1294740 2.1083e-01 5.8620e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.9915e-01 7.7590e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0731037 0.13141154 lowCoverage 1.00000 lowCoverage 0.5635793 0.7992424 -0.26173942 4 0.6909844 0.7469756 -0.05599125 8.1697e-01 1.2613e-03 lowCoverage 1.00000000 3.0762e-02 lowCoverage 0.94290055 7.5080e-03 lowCoverage 1.00000 2.0292e-01 lowCoverage -0.0779947 3.3226e-01 lowCoverage 1.0000000 lowCoverage chr5 39857750 39858750 19747 DAB2 ENSG00000153071 0.711054 79 6 0.7400097 45 3 0.5833333 32 3 0.568023 82 6 0.575000 27 3 0.7271490 168 6 0.629630 26 3 0.7666229 71 6 0.5439815 34 3 0.7708333 26 2 0.7859114 105 3 0.4166667 9 0 0.8086869 64 6 0.785714 19 2 0.6055556 35 6 0.1944444 10 0 0.8300439 90 3 0.802282 78 6 0.610675 56 3 0.7089325 134 5 0.729592 28 2 0.7261905 26 2 0.729545 53 4 0.663749 47 3 0.6555556 18 2 0.6976010 117 6 0.4814815 24 3 0.800000 27 4 0.6346405 47 6 0.7835227 90 6 0.6396605 89 3 0.645844 147 6 0.8541667 36 3 0.5595238 27 3 0.927778 81 3 0.583333 14 0 0.455651 70 3 0.6857028 90 3 0.607178 69 6 0.612179 68 6 0.5896903 55 4 0.5959596 28 1 0.682616 81 6 0.7974415 0.7181175 0.5690104 0.69445921 0.639063 0.768557 0.6314484 0.7813321 0.697049 0.7526042 0.7615733 0.5234375 0.7569287 0.828125 0.6614583 0.34114583 0.8127741 0.82679107 0.7050654 0.7893076 0.7466518 0.90104167 0.801491 0.710547 0.6463542 0.8363321 0.7361111 0.890625 0.7274510 0.8689631 0.7401620 0.745910 0.7652995 0.6350446 0.8121745 0.35677083 0.6946989 0.6830896 0.6952696 0.7134615 0.6788158 0.672112 0.773923 0 0.731933 0.754558 -0.02102594 4 0.7422954 0.6832988 0.05899658 0.279947 0.63674290 lowCoverage 1 1.000000 lowCoverage 0.54319 1.9304e-01 lowCoverage 1 1.00000000 lowCoverage -0.0240544 0.5746842 lowCoverage 1.00000 lowCoverage 0.731933 0.7358491 0.0157211 3 0.7422954 0.6825264 0.05976905 1.9981e-01 9.5791e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 3.1578e-01 0.92808623 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.01946513 8.1907e-01 lowCoverage 1.0000e+00 lowCoverage 0.732657 0.6677741 0.0530745 4 0.7716193 0.6053100 0.1663093 4.7803e-01 9.9518e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 1.2178e-01 9.9659e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0407028 3.0270e-01 lowCoverage 1.0000000 lowCoverage 0.754558 0.7358491 0.0508887 3 0.6832988 0.6825264 0.00077247 1.4105e-01 0.90210261 lowCoverage 1.0000e+00 1.00000 lowCoverage 1.4130e-01 0.95052066 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.0045893 9.5509e-01 lowCoverage 1.00000000 lowCoverage 0.756028 0.6677741 0.0739108 6 0.6978735 0.6053100 0.0925636 2.5153e-02 9.9322e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 4.1346e-02 9.9914e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.0647572 0.04433896 lowCoverage 1.00000 lowCoverage 0.7371795 0.6677741 0.03233234 3 0.6864913 0.6053100 0.08118131 6.3997e-01 8.8403e-01 lowCoverage 1.00000000 1.0000e+00 lowCoverage 0.78933813 8.9283e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.0601680 4.6259e-01 lowCoverage 1.0000000 lowCoverage chr5 40258450 40259450 19751 DAB2 ENSG00000153071 0.858226 175 5 0.8344444 99 5 0.7023810 74 5 0.823331 210 5 0.880535 98 5 0.7808200 346 5 0.907407 46 5 0.8170996 60 5 0.7355556 49 5 0.7004386 99 5 0.8878880 224 5 0.7500000 20 0 0.8600000 71 5 0.960000 24 4 0.7379509 107 5 1.0000000 10 0 NA 0 0 0.821051 204 5 0.874292 81 5 0.8503520 188 5 0.640873 36 5 0.8650794 88 5 0.820356 86 5 0.891952 63 5 0.7939986 83 5 0.8804762 100 5 0.7433333 29 4 1.000000 13 0 0.7081818 54 5 0.6735507 110 5 0.7277950 124 5 0.806475 281 5 0.8904412 85 5 0.8143791 86 5 0.990122 201 5 0.816667 18 0 0.657657 101 5 0.7806349 179 5 0.840535 286 5 0.848329 215 5 0.8538093 244 5 0.8904762 65 5 0.802220 234 5 0.8587247 0.8336570 0.7039066 0.82554548 0.856924 0.783977 0.8899676 0.8434098 0.737217 0.8546528 0.8896828 0.7524272 0.8600555 0.961165 0.8851259 1.00000000 NA 0.82202004 0.8505235 0.8219530 0.7677994 0.86631222 0.822222 0.870397 0.7979940 0.8830097 0.7472492 1.000000 0.7113416 0.8091811 0.8205910 0.808540 0.8924900 0.8164858 0.9901729 0.81877023 0.6584641 0.7824395 0.8429742 0.8506504 0.8566934 0.891586 0.805909 0 0.832037 0.820056 0.01452198 5 0.7774249 0.7922249 -0.01480005 0.505550 0.84245634 insignificant 1 1.000000 insignificant 0.45051 8.9651e-01 insignificant 1 1.00000000 insignificant 0.0346137 0.3387427 lowCoverage 1.00000 lowCoverage 0.833333 0.8462687 -0.0114610 5 0.8327687 0.8445142 -0.01174550 7.9144e-01 1.3640e-01 insignificant 1.0000e+00 1.0000000 insignificant 5.3369e-01 0.41966752 insignificant 1.0000e+00 1.00000 insignificant 0.00563619 9.1193e-01 lowCoverage 1.0000e+00 lowCoverage 0.833333 0.8362069 -0.0068650 5 0.8327687 0.8390252 -0.0062565 5.6545e-01 1.4262e-02 weaklyHypometh 1.0000e+00 8.9135e-01 insignificant 4.8457e-01 4.8577e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0164544 4.9341e-01 lowCoverage 1.0000000 lowCoverage 0.821698 0.8462687 -0.0260436 5 0.8175599 0.8445142 -0.02695431 9.0590e-01 0.18627079 insignificant 1.0000e+00 1.00000 insignificant 8.7997e-01 0.48354869 insignificant 1.0000e+00 1.00000 insignificant -0.0289775 6.0585e-01 lowCoverage 1.00000000 lowCoverage 0.821698 0.8362069 -0.0224603 5 0.8175599 0.8390252 -0.0214653 8.4306e-01 1.2799e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.1122e-01 1.5163e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0510681 0.14355805 lowCoverage 1.00000 lowCoverage 0.8462687 0.8362069 0.00259073 5 0.8445142 0.8390252 0.00548896 3.7154e-01 4.7805e-01 insignificant 1.00000000 1.0000e+00 insignificant 0.51010873 3.7206e-01 insignificant 1.00000 1.0000e+00 insignificant -0.0220906 6.5841e-01 lowCoverage 1.0000000 lowCoverage chr5 41827450 41828450 19783 PLCXD3 ENSG00000182836 0.810974 328 10 0.7359483 296 10 0.6860201 142 10 0.815863 219 10 0.802446 102 8 0.7586553 418 10 0.748830 176 10 0.7829606 243 10 0.6169690 151 10 0.8149188 142 10 0.7684071 318 10 0.4933333 63 5 0.8194476 196 10 0.742647 52 5 0.7559240 147 10 0.6650794 35 3 0.5989646 77 9 0.768336 232 10 0.732466 202 10 0.7980489 529 10 0.710816 169 10 0.7613188 150 10 0.800006 196 10 0.740063 122 9 0.8544505 75 7 0.7954434 289 10 0.7152832 156 9 0.742458 76 5 0.8059308 190 10 0.8627341 263 9 0.7279856 333 10 0.690962 491 10 0.7415844 195 8 0.7301984 127 10 0.760472 148 8 0.824242 38 3 0.628495 171 8 0.8101112 266 10 0.810809 561 10 0.832362 253 10 0.7718393 229 10 0.8173954 284 10 0.814414 292 10 0.8082307 0.7410350 0.6473288 0.82121965 0.772583 0.754965 0.7511005 0.8007350 0.688584 0.8004517 0.7599609 0.5066474 0.8122837 0.741041 0.7482621 0.66983209 0.5777165 0.77165663 0.7121687 0.8022447 0.7548338 0.75523498 0.780352 0.768565 0.8524471 0.7952782 0.7084571 0.777505 0.7614100 0.8330375 0.8025743 0.794489 0.7200818 0.7103220 0.8057461 0.81805045 0.6584635 0.7971073 0.8184249 0.8206634 0.8090020 0.780881 0.816492 8 0.769666 0.785315 -0.02241341 10 0.7765605 0.6915352 0.08502525 0.754392 0.12157394 insignificant 1 1.000000 insignificant 0.97135 2.2137e-02 weaklyHypometh 1 1.00000000 insignificant -0.0314757 0.2185100 insignificant 1.00000 insignificant 0.769628 0.7280423 0.0234096 10 0.7652059 0.7441366 0.02106934 4.8584e-02 7.2341e-01 weaklyHypermeth 6.5085e-01 1.0000000 insignificant 8.5799e-01 0.18108965 insignificant 1.0000e+00 1.00000 insignificant -0.01337201 7.0517e-01 insignificant 1.0000e+00 insignificant 0.769666 0.8528139 -0.0469525 10 0.7765605 0.8407240 -0.0641635 9.9989e-01 1.3389e-02 weaklyHypometh 1.0000e+00 8.9135e-01 insignificant 9.9999e-01 7.5234e-03 weaklyHypometh 1.0000e+00 7.5234e-01 insignificant -0.0735520 2.4331e-03 weaklyHypometh 0.2703407 insignificant 0.786400 0.7280423 0.0509880 10 0.7898423 0.7441366 0.04570570 1.9725e-03 0.96041063 weaklyHypermeth 3.0345e-02 1.00000 weaklyHypermeth 1.3941e-01 0.79620733 insignificant 1.0000e+00 1.00000 insignificant 0.0181037 5.9586e-01 insignificant 1.00000000 insignificant 0.785259 0.8523780 -0.0264698 10 0.6960325 0.8145144 -0.1184819 7.4224e-01 4.5156e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 8.0537e-01 7.7015e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0420764 0.04358123 weaklyHypometh 1.00000 insignificant 0.7280423 0.8525403 -0.06718131 10 0.7441366 0.8088687 -0.06473217 9.8722e-01 2.7337e-03 weaklyHypometh 1.00000000 5.5982e-02 weaklyHypometh 0.95786574 1.7791e-01 insignificant 1.00000 1.0000e+00 insignificant -0.0601800 9.2467e-02 insignificant 1.0000000 insignificant chr5 54507450 54508450 19916 CDC20B ENSG00000164287 0.015152 84 6 0.0042735 318 6 0.0051331 490 6 0.000000 18 0 0.000000 331 6 0.0081301 156 6 0.013251 838 6 0.0014620 470 6 0.0049861 567 6 0.0027100 502 6 0.0069986 340 6 0.0024876 613 6 0.0000000 410 6 NA 0 0 0.0064103 405 6 0.0015015 784 6 0.0033005 639 6 0.000000 19 2 0.000000 263 6 0.0000000 127 6 0.000000 37 3 0.0000000 7 0 0.013715 262 6 0.000000 104 6 NA 0 0 0.0012438 538 6 0.0277778 43 6 0.000000 60 5 0.0109878 339 6 0.0026882 500 6 0.0017182 382 6 0.000000 142 6 0.0577868 444 6 0.0146097 327 6 0.065041 186 6 0.066667 18 0 0.043750 52 5 0.0084167 502 6 0.000000 85 6 0.000000 78 6 0.0000000 20 1 0.0000000 14 0 0.000000 15 0 0.0097403 0.0027473 0.0032998 0.00077301 0.000000 0.013937 0.0128488 0.0025063 0.005842 0.0046458 0.0087508 0.0015991 0.0000000 NA 0.0041209 0.00096525 0.0032448 0.00000000 0.0000000 0.0000000 0.0019777 0.00019201 0.011607 0.000000 NA 0.0021322 0.0178571 0.000000 0.0154669 0.0017281 0.0029455 0.000000 0.0420635 0.0138845 0.1114983 0.10536490 0.0392857 0.0084122 0.0000000 0.0000000 0.0000000 0.000000 0.000000 0 0.004204 0.004971 -0.00068122 6 0.0042493 0.0046542 -0.00040486 0.784559 0.44918867 insignificant 1 1.000000 insignificant 0.43784 8.8681e-01 insignificant 1 1.00000000 insignificant -0.0012954 0.6580939 lowCoverage 1.00000 lowCoverage 0.004204 0.0327011 -0.0286031 6 0.0042493 0.0350279 -0.03077854 9.9985e-01 2.6240e-06 weaklyHypometh 1.0000e+00 0.0013120 weaklyHypometh 9.9879e-01 0.00024923 weaklyHypometh 1.0000e+00 0.12461 insignificant -0.03872250 1.3626e-02 lowCoverage 4.7767e-01 lowCoverage 0.004204 0.0000000 0.0041835 6 0.0042493 0.0000000 0.0042493 2.9698e-02 9.9909e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 4.5862e-02 9.9932e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.0039893 1.0420e-03 lowCoverage 0.1822980 lowCoverage 0.004971 0.0327011 -0.0297147 6 0.0046542 0.0350279 -0.03037369 9.9744e-01 0.00355107 weaklyHypometh 1.0000e+00 0.88777 insignificant 9.9944e-01 0.00089961 weaklyHypometh 1.0000e+00 0.44981 insignificant -0.0374271 1.4513e-02 lowCoverage 0.50044472 lowCoverage 0.004971 0.0000000 0.0048942 6 0.0046542 0.0000000 0.0046542 7.2532e-02 9.9610e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.6473e-01 9.9833e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0052846 0.07609149 lowCoverage 1.00000 lowCoverage 0.0327011 0.0000000 0.03470180 6 0.0350279 0.0000000 0.03502789 1.2295e-03 9.9995e-01 weaklyHypermeth 0.24590822 1.0000e+00 insignificant 0.00063345 1.0000e+00 weaklyHypermeth 0.44235 1.0000e+00 insignificant 0.0427118 9.4177e-03 lowCoverage 0.3767071 lowCoverage chr5 55846650 55847650 19962 ENSG00000216408 0.747918 165 4 0.8105920 231 5 0.7576471 85 5 0.820816 125 5 0.949206 41 3 0.8758299 195 6 0.797386 48 4 0.7635997 138 5 0.7227800 85 5 0.8535948 77 5 0.8744458 171 5 0.4666667 17 1 0.8266778 126 5 0.654762 23 1 0.9232760 76 4 0.7500000 14 1 0.2708333 18 1 0.809988 148 4 0.920171 142 5 0.8344173 177 5 0.688571 32 3 0.5842607 78 4 0.853259 106 5 0.904286 43 4 0.9456140 61 4 0.9170374 238 5 0.7727273 60 3 0.935556 30 2 0.8668562 157 5 0.9458498 312 5 0.8808034 269 5 0.943916 200 5 0.9015421 194 5 0.8165869 83 4 0.500000 50 2 0.666667 4 0 0.949818 97 5 0.7576623 267 5 0.767214 140 4 0.798275 121 4 0.5031136 145 4 0.4135879 113 4 0.711032 179 5 0.7718423 0.8611866 0.7601168 0.82547596 0.927052 0.910624 0.8378529 0.8033571 0.687979 0.8718885 0.8995928 0.4308511 0.8338221 0.808720 0.9081865 0.66778138 0.3093155 0.76992978 0.9150209 0.8268384 0.6697568 0.60287687 0.823429 0.862538 0.9218925 0.9275276 0.7702289 0.907447 0.8766448 0.9510861 0.9036874 0.937103 0.9152579 0.8182879 0.8283423 0.73304158 0.9347002 0.7775482 0.7005022 0.7343405 0.5676058 0.551750 0.735132 2 0.826356 0.878941 -0.05489391 5 0.7938915 0.9006674 -0.10677588 0.999933 0.01273069 weaklyHypometh 1 1.000000 insignificant 0.99988 1.8007e-02 weaklyHypometh 1 1.00000000 insignificant -0.0816976 0.1037276 lowCoverage 1.00000 lowCoverage 0.827043 0.8417266 -0.0228566 5 0.8193365 0.8114501 0.00788639 3.5570e-01 1.9637e-01 insignificant 1.0000e+00 1.0000000 insignificant 6.0864e-01 0.01388085 weaklyHypometh 1.0000e+00 1.00000 insignificant 0.00615101 9.3747e-01 lowCoverage 1.0000e+00 lowCoverage 0.826356 0.6833811 0.1564399 4 0.7938915 0.5530056 0.2408859 3.8190e-07 9.9901e-01 lowCoverage 8.9860e-05 1.0000e+00 lowCoverage 3.2561e-04 9.9883e-01 lowCoverage 6.5122e-02 1.0000e+00 lowCoverage 0.1328859 1.6633e-01 lowCoverage 1.0000000 lowCoverage 0.878864 0.8417266 0.0382116 5 0.8808009 0.8114501 0.06935078 3.7150e-02 0.85140789 weaklyHypermeth 5.1597e-01 1.00000 insignificant 1.7649e-01 0.21045019 insignificant 1.0000e+00 1.00000 insignificant 0.0878486 2.7685e-01 lowCoverage 1.00000000 lowCoverage 0.878941 0.6833811 0.2103657 4 0.9006674 0.5530056 0.3476618 3.6979e-08 1.0000e+00 lowCoverage 1.2326e-05 1.0000e+00 lowCoverage 6.1211e-05 1.0000e+00 lowCoverage 1.5303e-02 1.0000e+00 lowCoverage 0.2145835 0.04454816 lowCoverage 1.00000 lowCoverage 0.8417266 0.6843615 0.17901062 4 0.8114501 0.6636067 0.14784337 6.4621e-04 9.8666e-01 lowCoverage 0.16155276 1.0000e+00 lowCoverage 0.00282305 9.9309e-01 lowCoverage 0.56461 1.0000e+00 lowCoverage 0.1267349 2.4556e-01 lowCoverage 1.0000000 lowCoverage chr5 58458850 58459850 20065 PDE4D ENSG00000113448 0.0071306 474 6 0.0000000 267 6 0.0032680 239 6 0.0031447 274 6 0.0000000 99 6 0.0183667 533 6 0.0118464 219 6 0.0000000 202 6 0.020383 269 5 0.0000000 209 5 0.0075475 230 6 0.0045045 158 6 0.000000 200 5 0.0000000 4 0 0.0111442 232 5 0.009804 110 6 0.0033333 234 5 0.00555556 310 6 0.0052083 120 5 0.0130719 405 6 0.008772 60 5 0.0000000 122 5 0.0095943 226 6 0.0079365 116 6 0.000000 69 5 0.00000000 309 6 0.000000 156 6 0.0416013 66 5 0.0151515 205 6 0.0032051 391 6 0.0000000 291 6 0.0104818 543 6 0.0000000 234 6 0.0742150 125 5 0.000000 241 3 0.000000 80 5 0.0160714 112 6 0.0019841 283 6 0.0017007 652 6 0.0000000 416 6 0.00822511 472 6 0.0000000 347 5 0.0057724 521 6 0.0093199 0.0000000 0.0038671 0.0050839 0.00000000 0.0209339 0.00597086 0.0000000 0.0213474 0.0000000 0.01040435 0.0056306 0.00008359 0.0043918 0.0136100 0.0075163 0.00337063 0.0061111 0.0084201 0.0040959 0.014181 0.0000000 0.0128198 0.0099206 0.00000000 0.00000000 0.0000000 0.0600122 0.016667 0.0035256 0.0000000 0.0123574 0.0000000 0.0728643 0.010073 0.000000 0.019831 0.0032077 0.0018707 0.0000000 0.0077946 0.00000000 0.0081098 5 0.0085631 0.0070505 0.00147053 6 0.0073065 0.0055929 0.0017136 0.1689867 9.3198e-01 insignificant 1 1.0000e+00 insignificant 0.33454 0.95534547 insignificant 1 1.00000 insignificant -0.0018464 0.6231023 insignificant 1 insignificant 0.0085649 0.0130233 -0.00522418 6 0.0085243 0.0165060 -0.00798177 6.2301e-01 3.4676e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.7784e-01 6.7015e-01 insignificant 1.00000000 1.00000000 insignificant -0.00916298 0.48295845 insignificant 1.00000 insignificant 0.0085649 0.0033223 5.0933e-03 6 0.0085243 0.0032003 0.00532401 7.5715e-02 0.9735157 insignificant 1.0000e+00 1.00000 insignificant 4.3249e-01 0.8257543 insignificant 1.00000000 1.00000 insignificant 0.00307581 0.1827172 insignificant 1.00000 insignificant 0.0070533 0.0130233 -0.0071356 6 0.0065250 0.0165060 -0.0099810 8.9536e-01 0.37219800 insignificant 1.0000e+00 1.00000 insignificant 9.5065e-01 0.44555782 insignificant 1.0000e+00 1.00000 insignificant -0.00731655 0.5807807 insignificant 1.00000 insignificant 0.0070533 0.0033223 0.00368572 6 0.0065250 0.0032003 0.0033248 6.1239e-01 0.6416319 insignificant 1.00000000 1 insignificant 0.80554704 0.594182 insignificant 1.00000 1 insignificant 0.0049222 0.2138260 insignificant 1.00000 insignificant 0.0130233 0.0033223 0.00922565 6 0.0165060 0.0032003 0.0133058 3.9158e-01 7.2674e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.4989e-01 0.80989561 insignificant 1.00000000 1.00000 insignificant 0.01223879 0.3586497 insignificant 1.00000 insignificant chr5 59874450 59875450 20138 PART1 ENSG00000152931 0.5282073 147 5 0.5421245 81 5 0.5007979 118 5 0.5432391 76 5 0.8100000 33 2 0.6094457 263 5 0.5608333 71 5 0.6293552 70 5 0.609013 108 5 0.6453626 95 5 0.5554433 182 5 0.5575163 84 5 0.556399 103 5 NA 0 0 0.5274258 72 5 0.474242 56 5 0.5008838 75 5 0.51388889 86 5 0.6152332 120 5 0.6234818 245 5 0.671429 36 2 0.5650794 58 5 0.5973297 86 5 0.5796154 37 5 0.692857 50 5 0.58101251 119 5 0.557937 43 5 0.5571429 35 5 0.6089744 63 5 0.5647011 118 5 0.5922368 129 5 0.5671032 258 5 0.5532980 109 5 0.5419048 71 5 0.498168 96 5 0.620833 47 5 0.6913043 66 5 0.4800135 163 5 0.6012803 135 5 0.6157160 181 5 0.64861660 113 5 0.5668253 179 5 0.6291441 127 5 0.5873875 0.5694022 0.5682520 0.6029615 0.84734043 0.6474513 0.62539894 0.6874087 0.6682952 0.6973710 0.62399228 0.6218667 0.62769308 NA 0.5927000 0.5672147 0.58205056 0.5544474 0.6902464 0.6695595 0.704407 0.6617697 0.6547267 0.6289075 0.75367275 0.63810023 0.6169791 0.6177812 0.685284 0.6311822 0.6543323 0.6237569 0.5745476 0.5920973 0.562778 0.673316 0.725486 0.5449936 0.6486676 0.6724422 0.7082668 0.62373028 0.6821011 5 0.5899281 0.6182171 -0.01399413 5 0.5709721 0.5829714 -0.0119993 0.2232797 4.6894e-02 weaklyHypometh 1 1.0000e+00 insignificant 0.15808 0.00624989 weaklyHypometh 1 1.00000 insignificant -0.0207817 0.3411308 lowCoverage 1 lowCoverage 0.5899281 0.5815217 0.03879459 5 0.5709721 0.5409235 0.03004860 8.1535e-03 8.1716e-01 weaklyHypermeth 3.1360e-01 1.0000e+00 insignificant 9.8959e-02 6.7344e-01 insignificant 1.00000000 1.00000000 insignificant 0.00958275 0.80048231 lowCoverage 1.00000 lowCoverage 0.5899281 0.6176871 -3.6192e-02 5 0.5709721 0.6087138 -0.03774164 9.6084e-01 0.0198447 weaklyHypometh 1.0000e+00 1.00000 insignificant 9.7476e-01 0.0164698 weaklyHypometh 1.00000000 1.00000 insignificant -0.03847996 0.0997293 lowCoverage 1.00000 lowCoverage 0.6182171 0.5815217 0.0497391 5 0.5829714 0.5409235 0.0420479 3.6607e-03 0.53903450 weaklyHypermeth 1.5253e-01 1.00000 insignificant 4.1879e-02 0.49959444 weaklyHypermeth 1.0000e+00 1.00000 insignificant 0.03036440 0.4133530 lowCoverage 1.00000 lowCoverage 0.6182171 0.6176871 -0.02151772 5 0.5829714 0.6087138 -0.0257423 9.0537e-01 0.0654194 insignificant 1.00000000 1 insignificant 0.73905243 0.130760 insignificant 1.00000 1 insignificant -0.0176983 0.3664782 lowCoverage 1.00000 lowCoverage 0.5815217 0.6176871 -0.07076412 5 0.5409235 0.6087138 -0.0677902 9.9609e-01 3.8083e-03 weaklyHypometh 1.0000e+00 1.8135e-01 insignificant 9.9649e-01 0.02322877 weaklyHypometh 1.00000000 1.00000 insignificant -0.04806271 0.2159492 insignificant 1.00000 insignificant chr5 60383350 60384350 20145 NDUFAF2 ENSG00000164182 0.7258998 227 6 0.8181174 79 6 0.7290850 80 6 0.8105469 103 6 0.9095238 34 6 0.7658328 219 6 0.9019493 74 5 0.8500000 65 5 0.672403 62 6 0.7948275 83 5 0.7467773 134 6 0.8005952 76 6 0.805176 94 6 NA 0 0 0.7452732 86 6 0.725595 39 6 0.8413012 73 6 0.71731574 126 6 0.7712312 137 6 0.8203361 193 6 0.786364 41 4 0.8379630 35 3 0.7648177 155 6 0.9000000 42 3 0.875000 39 5 0.73916319 110 6 0.855556 51 3 0.8000000 45 4 0.7609488 60 6 0.8221884 169 6 0.8063679 148 6 0.7820737 239 6 0.7427930 85 5 0.7080267 76 6 0.748616 108 6 0.783333 71 5 0.6355159 43 5 0.6133223 133 6 0.8116253 218 6 0.7779891 277 6 0.84161131 153 6 0.8457954 181 6 0.8094753 195 6 0.7316619 0.7802603 0.7610644 0.8473020 0.88816327 0.7837012 0.88648287 0.8400000 0.7223562 0.7587847 0.77964956 0.7622449 0.85970888 NA 0.7919081 0.7186735 0.82276942 0.7519009 0.8034765 0.8159161 0.718961 0.7714286 0.7583681 0.8842857 0.90000000 0.77275994 0.8212813 0.7392857 0.757975 0.8221810 0.8148860 0.7901801 0.6862545 0.7203525 0.740783 0.752857 0.635612 0.6615730 0.8287216 0.7946215 0.8786793 0.86037792 0.8596042 3 0.7807460 0.7927690 -0.01238042 6 0.7694009 0.7885512 -0.0191503 0.3050400 1.1111e-01 insignificant 1 1.0000e+00 insignificant 0.22662 0.13692685 insignificant 1 1.00000 insignificant -0.0239340 0.2456600 lowCoverage 1 lowCoverage 0.7807460 0.7073643 0.07293267 6 0.7694009 0.7073156 0.06208537 2.8310e-04 9.8658e-01 weaklyHypermeth 1.5728e-02 1.0000e+00 weaklyHypermeth 1.8798e-04 9.9771e-01 weaklyHypermeth 0.03132936 1.00000000 weaklyHypermeth 0.08166828 0.03036151 weaklyHypermeth 1.00000 insignificant 0.7807460 0.8203125 -4.7012e-02 6 0.7694009 0.8143880 -0.04498709 9.9408e-01 0.0243485 weaklyHypometh 1.0000e+00 1.00000 insignificant 9.4936e-01 0.0451471 weaklyHypometh 1.00000000 1.00000 insignificant -0.03036312 0.1294898 insignificant 1.00000 insignificant 0.7927690 0.7073643 0.0812443 6 0.7885512 0.7073156 0.0812357 1.2346e-05 0.99914644 weaklyHypermeth 1.0288e-03 1.00000 weaklyHypermeth 4.7757e-04 0.99569220 weaklyHypermeth 6.8224e-02 1.00000 weaklyHypermeth 0.10560230 0.0096305 lowCoverage 0.96305 lowCoverage 0.7927690 0.8203125 -0.03786815 6 0.7885512 0.8143880 -0.0258368 8.7721e-01 0.0162040 weaklyHypometh 1.00000000 1 insignificant 0.46052127 0.031523 weaklyHypometh 1.00000 1 insignificant -0.0064291 0.7368624 lowCoverage 1.00000 lowCoverage 0.7073643 0.8203125 -0.12546727 6 0.7073156 0.8143880 -0.1070725 9.9918e-01 9.1093e-05 weaklyHypometh 1.0000e+00 1.3013e-02 weaklyHypometh 9.9754e-01 0.00097646 weaklyHypometh 1.00000000 0.19529 insignificant -0.11203140 0.0077654 weaklyHypometh 1.00000 insignificant chr5 61746950 61747950 20181 IPO11 ENSG00000086200 0.6788471 358 11 0.6060167 185 11 0.6396076 164 9 0.7453973 225 11 0.6650871 94 9 0.7039366 467 11 0.5938942 182 10 0.5786404 202 11 0.678386 144 11 0.6459045 140 10 0.7667139 324 11 0.5773183 91 6 0.735418 171 11 0.7678571 52 5 0.7345254 158 10 0.722685 86 7 0.5826091 79 6 0.62335183 255 13 0.7023241 182 9 0.7284106 337 11 0.594254 82 6 0.8517857 71 8 0.6215460 222 12 0.6676036 109 8 0.705769 73 7 0.60997467 291 13 0.728073 92 8 0.7559524 32 1 0.6477952 167 11 0.6615366 282 13 0.6227656 244 13 0.7560991 498 11 0.5349359 178 11 0.5859600 180 11 0.677989 186 11 0.625000 28 0 0.5357800 122 11 0.6436012 237 13 0.6756603 303 11 0.6923378 339 11 0.67006775 272 13 0.7233287 280 9 0.6852911 248 13 0.7550896 0.6682785 0.6966865 0.7814474 0.69920009 0.7548720 0.69573344 0.7102708 0.6903681 0.6759693 0.75664250 0.6072761 0.75605701 0.7360038 0.7869035 0.6582071 0.71855224 0.7015700 0.7204230 0.7742396 0.690007 0.8317334 0.6843749 0.8554458 0.77625000 0.74183876 0.8462913 0.8365073 0.784211 0.7331193 0.7261247 0.7915289 0.6544682 0.7038827 0.918687 0.756756 0.642604 0.7299802 0.7488740 0.7991547 0.7065731 0.75786870 0.7765166 3 0.6986653 0.7383264 -0.02317487 11 0.6698402 0.6358602 0.0339801 0.5110857 2.1038e-01 insignificant 1 1.0000e+00 insignificant 0.35136 0.06484329 insignificant 1 1.00000 insignificant -0.0114163 0.6696363 insignificant 1 insignificant 0.6986653 0.7228786 0.00118620 11 0.6698402 0.5770069 0.09283332 9.5025e-02 6.1779e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.0349e-02 7.9994e-01 insignificant 1.00000000 1.00000000 insignificant 0.07330215 0.02767071 weaklyHypermeth 1.00000 insignificant 0.6985028 0.6886269 -1.9277e-02 11 0.6759625 0.6923850 -0.01642255 9.6813e-01 0.1585293 insignificant 1.0000e+00 1.00000 insignificant 9.3347e-01 0.1230134 insignificant 1.00000000 1.00000 insignificant -0.01549055 0.3782228 insignificant 1.00000 insignificant 0.7383264 0.7228786 0.0243437 11 0.6358602 0.5770069 0.0588533 5.3811e-02 0.83805563 insignificant 1.0000e+00 1.00000 insignificant 3.1180e-02 0.83008679 weaklyHypermeth 1.0000e+00 1.00000 insignificant 0.08471845 0.0219660 weaklyHypermeth 1.00000 insignificant 0.7415888 0.6886269 0.00663076 11 0.6806193 0.6923850 -0.0117657 5.0967e-01 0.0973916 insignificant 1.00000000 1 insignificant 0.52919279 0.109846 insignificant 1.00000 1 insignificant -0.0040743 0.8673069 insignificant 1.00000 insignificant 0.7277657 0.6886269 -0.02204276 11 0.6173179 0.6923850 -0.0750671 9.3426e-01 3.7128e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9734e-01 0.03779751 weaklyHypometh 1.00000000 1.00000 insignificant -0.08879270 0.0120221 weaklyHypometh 1.00000 insignificant chr5 64366950 64367950 20192 SDCCAG10 ENSG00000153015 0.0034031 843 29 0.0081721 655 29 0.0134940 722 30 0.0407948 799 19 0.0015152 559 29 0.0096845 965 27 0.0051945 740 29 0.0038398 628 29 0.049675 656 30 0.0067507 637 25 0.0170215 947 30 0.0031933 802 30 0.019490 648 29 0.1023226 242 16 0.0194058 671 24 0.048186 656 25 0.0047669 544 23 0.00095238 823 17 0.0019940 534 29 0.0088455 701 24 0.016057 406 21 0.0172562 698 8 0.0460042 621 30 0.0364434 342 27 0.057379 266 15 0.00046948 924 30 0.013012 712 24 0.0065667 851 20 0.0058096 564 30 0.0062743 789 30 0.0043056 833 30 0.0273248 797 29 0.0395173 450 28 0.0085445 602 29 0.035332 480 24 0.012943 354 14 0.0101461 343 20 0.0150946 862 30 0.0060768 1377 23 0.0269155 902 25 0.00305102 1029 17 0.0575134 748 17 0.0344828 1059 17 0.0075690 0.0091128 0.0294261 0.0631118 0.00038784 0.0246169 0.00043209 0.0031548 0.0475287 0.0136289 0.02832923 0.0020103 0.04522731 0.1443243 0.0366625 0.0563946 0.00126111 0.0033642 0.0019731 0.0221075 0.011435 0.0165200 0.0702918 0.0168777 0.10275713 0.00084122 0.0049474 0.0052293 0.013498 0.0010372 0.0040600 0.0742859 0.0298329 0.0120668 0.067233 0.031721 0.017685 0.0354338 0.0101863 0.0710590 0.0067199 0.12443502 0.0000000 10 0.0135812 0.0165342 0.00389846 30 0.0496705 0.0233159 0.0263545 0.1619940 1.8106e-01 insignificant 1 1.0000e+00 insignificant 0.50661 0.21520865 insignificant 1 1.00000 insignificant -0.0013067 0.8657226 insignificant 1 insignificant 0.0135783 0.0158525 -0.00076410 30 0.0456431 0.0253848 0.02025839 7.1504e-01 9.7976e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.1276e-01 9.9778e-01 insignificant 1.00000000 1.00000000 insignificant -0.00182776 0.81863401 insignificant 1.00000 insignificant 0.0134448 0.0136906 -6.9803e-03 19 0.0438463 0.0476804 -0.00383409 7.6877e-01 0.9559635 insignificant 1.0000e+00 1.00000 insignificant 9.5456e-01 0.9745995 insignificant 1.00000000 1.00000 insignificant -0.00717276 0.5504894 insignificant 1.00000 insignificant 0.0165342 0.0158833 -0.0050158 30 0.0233159 0.0276246 -0.0043086 9.2106e-01 0.99426924 insignificant 1.0000e+00 1.00000 insignificant 9.6538e-01 0.99998528 insignificant 1.0000e+00 1.00000 insignificant -0.00052105 0.9466456 insignificant 1.00000 insignificant 0.0163113 0.0136879 -0.01725999 19 0.0115156 0.0476804 -0.0361648 9.7408e-01 0.9635732 insignificant 1.00000000 1 insignificant 0.98218598 0.993949 insignificant 1.00000 1 insignificant -0.0058661 0.6205841 insignificant 1.00000 insignificant 0.0158988 0.0136906 -0.00757709 19 0.0293511 0.0476804 -0.0183293 9.9997e-01 9.8625e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.0000e+00 0.99841294 insignificant 1.00000000 1.00000 insignificant -0.00534501 0.6548989 insignificant 1.00000 insignificant chr5 64367050 64368050 20193 SDCCAG10 ENSG00000153015 0.0034031 843 29 0.0081721 655 29 0.0134940 722 30 0.0407948 799 19 0.0015152 559 29 0.0096845 965 27 0.0051945 740 29 0.0038398 628 29 0.049675 656 30 0.0067507 637 25 0.0170215 947 30 0.0031933 802 30 0.019490 648 29 0.1023226 242 16 0.0194058 671 24 0.048186 656 25 0.0047669 544 23 0.00095238 823 17 0.0019940 534 29 0.0088455 701 24 0.016057 406 21 0.0172562 698 8 0.0460042 621 30 0.0364434 342 27 0.057379 266 15 0.00046948 924 30 0.013012 712 24 0.0065667 851 20 0.0058096 564 30 0.0062743 789 30 0.0043056 833 30 0.0273248 797 29 0.0395173 450 28 0.0085445 602 29 0.035332 480 24 0.012943 354 14 0.0101461 343 20 0.0150946 862 30 0.0060768 1377 23 0.0269155 902 25 0.00305102 1029 17 0.0575134 748 17 0.0344828 1059 17 0.0075690 0.0091128 0.0294261 0.0631118 0.00038784 0.0246169 0.00043209 0.0031548 0.0475287 0.0136289 0.02832923 0.0020103 0.04522731 0.1443243 0.0366625 0.0563946 0.00126111 0.0033642 0.0019731 0.0221075 0.011435 0.0165200 0.0702918 0.0168777 0.10275713 0.00084122 0.0049474 0.0052293 0.013498 0.0010372 0.0040600 0.0742859 0.0298329 0.0120668 0.067233 0.031721 0.017685 0.0354338 0.0101863 0.0710590 0.0067199 0.12443502 0.0000000 10 0.0135812 0.0165342 0.00389846 30 0.0496705 0.0233159 0.0263545 0.1619940 1.8106e-01 insignificant 1 1.0000e+00 insignificant 0.50661 0.21520865 insignificant 1 1.00000 insignificant -0.0013067 0.8657226 insignificant 1 insignificant 0.0135783 0.0158525 -0.00076410 30 0.0456431 0.0253848 0.02025839 7.1504e-01 9.7976e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.1276e-01 9.9778e-01 insignificant 1.00000000 1.00000000 insignificant -0.00182776 0.81863401 insignificant 1.00000 insignificant 0.0134448 0.0136906 -6.9803e-03 19 0.0438463 0.0476804 -0.00383409 7.6877e-01 0.9559635 insignificant 1.0000e+00 1.00000 insignificant 9.5456e-01 0.9745995 insignificant 1.00000000 1.00000 insignificant -0.00717276 0.5504894 insignificant 1.00000 insignificant 0.0165342 0.0158833 -0.0050158 30 0.0233159 0.0276246 -0.0043086 9.2106e-01 0.99426924 insignificant 1.0000e+00 1.00000 insignificant 9.6538e-01 0.99998528 insignificant 1.0000e+00 1.00000 insignificant -0.00052105 0.9466456 insignificant 1.00000 insignificant 0.0163113 0.0136879 -0.01725999 19 0.0115156 0.0476804 -0.0361648 9.7408e-01 0.9635732 insignificant 1.00000000 1 insignificant 0.98218598 0.993949 insignificant 1.00000 1 insignificant -0.0058661 0.6205841 insignificant 1.00000 insignificant 0.0158988 0.0136906 -0.00757709 19 0.0293511 0.0476804 -0.0183293 9.9997e-01 9.8625e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.0000e+00 0.99841294 insignificant 1.00000000 1.00000 insignificant -0.00534501 0.6548989 insignificant 1.00000 insignificant chr5 65540150 65541150 20224 ENSG00000205619 0.9311540 299 5 0.8978099 130 5 0.9547059 91 5 0.9651411 289 5 0.8794548 90 5 0.9346253 241 5 0.9501998 124 5 0.9436597 88 5 0.900293 131 5 0.9866071 123 5 0.6910299 168 5 0.9272727 55 5 0.799954 181 5 0.9777778 42 5 0.8145912 141 5 1.000000 61 3 0.7000000 35 3 0.96004491 347 5 0.9200000 59 5 0.9299903 181 5 0.742857 21 1 0.9133071 111 5 0.8126263 135 5 0.7579365 48 5 0.934225 88 5 0.96942356 147 5 0.918913 111 5 0.9298701 87 5 0.9714286 82 5 0.9371429 138 5 0.9220085 109 5 0.9184660 180 5 0.9409429 123 5 0.9733333 70 5 0.560000 48 2 0.981818 51 5 0.6691782 101 6 0.8898479 131 5 0.9491769 369 5 0.9706205 249 5 0.95852986 291 5 0.9770746 248 5 0.9778707 334 5 0.9343879 0.8989670 0.9612899 0.9581714 0.86753303 0.9366560 0.95356101 0.9333689 0.8994991 0.9768778 0.96037126 0.9294741 0.96342305 0.9840558 0.9774499 1.0000000 0.69207773 0.9636874 0.9390135 0.9357649 0.729660 0.9066971 0.9779182 0.8178518 0.92906407 0.96465379 0.9218645 0.9391804 0.970105 0.9269699 0.9160918 0.9168913 0.9482803 0.9796712 0.836444 0.977578 0.916265 0.9042922 0.9502324 0.9721048 0.9595185 0.97513687 0.9807297 5 0.9422809 0.9260143 0.01493326 5 0.8245847 0.8773066 -0.0527219 0.2679480 8.0202e-01 insignificant 1 1.0000e+00 insignificant 0.18927 0.78866697 insignificant 1 1.00000 insignificant 0.0091985 0.7597715 lowCoverage 1 lowCoverage 0.9422809 0.8874046 0.04317812 5 0.8245847 0.6629976 0.16158716 8.8584e-02 6.4434e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.4638e-01 6.1786e-01 insignificant 1.00000000 1.00000000 insignificant 0.06736213 0.40608722 lowCoverage 1.00000 lowCoverage 0.9435146 0.9671362 -2.3212e-02 5 0.9410853 0.9654818 -0.02439655 9.8572e-01 0.0538785 insignificant 1.0000e+00 1.00000 insignificant 9.7667e-01 0.0808459 insignificant 1.00000000 1.00000 insignificant -0.06343895 0.0049452 lowCoverage 0.61814 lowCoverage 0.9260143 0.8874046 0.0294809 5 0.8773066 0.6629976 0.2143090 4.3901e-01 0.40223852 insignificant 1.0000e+00 1.00000 insignificant 8.8507e-01 0.26459853 insignificant 1.0000e+00 1.00000 insignificant 0.05816365 0.4731227 lowCoverage 1.00000 lowCoverage 0.9273163 0.9671362 -0.03933626 5 0.9282293 0.9654818 -0.0372526 9.8810e-01 0.0226079 weaklyHypometh 1.00000000 1 insignificant 0.98042977 0.011342 weaklyHypometh 1.00000 1 insignificant -0.0726374 0.0084233 lowCoverage 1.00000 lowCoverage 0.8992248 0.9671362 -0.06627280 5 0.8996252 0.9654818 -0.0658567 8.7002e-01 2.5037e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.2706e-01 0.46656138 insignificant 1.00000000 1.00000 insignificant -0.13080108 0.1316129 lowCoverage 1.00000 lowCoverage chr5 65540350 65541350 20225 ENSG00000205619 0.9311540 299 5 0.8978099 130 5 0.9547059 91 5 0.9651411 289 5 0.8794548 90 5 0.9346253 241 5 0.9501998 124 5 0.9436597 88 5 0.900293 131 5 0.9866071 123 5 0.6910299 168 5 0.9272727 55 5 0.799954 181 5 0.9777778 42 5 0.8145912 141 5 1.000000 61 3 0.7000000 35 3 0.96004491 347 5 0.9200000 59 5 0.9299903 181 5 0.742857 21 1 0.9133071 111 5 0.8126263 135 5 0.7579365 48 5 0.934225 88 5 0.96942356 147 5 0.918913 111 5 0.9298701 87 5 0.9714286 82 5 0.9371429 138 5 0.9220085 109 5 0.9184660 180 5 0.9409429 123 5 0.9733333 70 5 0.560000 48 2 0.981818 51 5 0.6691782 101 6 0.8898479 131 5 0.9491769 369 5 0.9706205 249 5 0.95852986 291 5 0.9770746 248 5 0.9778707 334 5 0.9343879 0.8989670 0.9612899 0.9581714 0.86753303 0.9366560 0.95356101 0.9333689 0.8994991 0.9768778 0.96037126 0.9294741 0.96342305 0.9840558 0.9774499 1.0000000 0.69207773 0.9636874 0.9390135 0.9357649 0.729660 0.9066971 0.9779182 0.8178518 0.92906407 0.96465379 0.9218645 0.9391804 0.970105 0.9269699 0.9160918 0.9168913 0.9482803 0.9796712 0.836444 0.977578 0.916265 0.9042922 0.9502324 0.9721048 0.9595185 0.97513687 0.9807297 5 0.9422809 0.9260143 0.01493326 5 0.8245847 0.8773066 -0.0527219 0.2679480 8.0202e-01 insignificant 1 1.0000e+00 insignificant 0.18927 0.78866697 insignificant 1 1.00000 insignificant 0.0091985 0.7597715 lowCoverage 1 lowCoverage 0.9422809 0.8874046 0.04317812 5 0.8245847 0.6629976 0.16158716 8.8584e-02 6.4434e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.4638e-01 6.1786e-01 insignificant 1.00000000 1.00000000 insignificant 0.06736213 0.40608722 lowCoverage 1.00000 lowCoverage 0.9435146 0.9671362 -2.3212e-02 5 0.9410853 0.9654818 -0.02439655 9.8572e-01 0.0538785 insignificant 1.0000e+00 1.00000 insignificant 9.7667e-01 0.0808459 insignificant 1.00000000 1.00000 insignificant -0.06343895 0.0049452 lowCoverage 0.61814 lowCoverage 0.9260143 0.8874046 0.0294809 5 0.8773066 0.6629976 0.2143090 4.3901e-01 0.40223852 insignificant 1.0000e+00 1.00000 insignificant 8.8507e-01 0.26459853 insignificant 1.0000e+00 1.00000 insignificant 0.05816365 0.4731227 lowCoverage 1.00000 lowCoverage 0.9273163 0.9671362 -0.03933626 5 0.9282293 0.9654818 -0.0372526 9.8810e-01 0.0226079 weaklyHypometh 1.00000000 1 insignificant 0.98042977 0.011342 weaklyHypometh 1.00000 1 insignificant -0.0726374 0.0084233 lowCoverage 1.00000 lowCoverage 0.8992248 0.9671362 -0.06627280 5 0.8996252 0.9654818 -0.0658567 8.7002e-01 2.5037e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.2706e-01 0.46656138 insignificant 1.00000000 1.00000 insignificant -0.13080108 0.1316129 lowCoverage 1.00000 lowCoverage chr5 68408450 68409450 20321 ENSG00000222762 0.7105405 190 8 0.6403268 108 8 0.7100000 48 4 0.6805768 132 7 0.7099868 82 8 0.5815345 125 8 0.6872727 95 8 0.7684009 105 8 0.534091 46 3 0.8206790 55 8 0.6729054 149 8 0.7886905 40 3 0.793861 104 8 0.7329545 83 8 0.8377273 69 8 0.821429 32 3 0.9523810 12 0 0.67841709 224 6 0.7155797 44 1 0.7118090 88 8 0.772258 49 4 0.8571429 22 3 0.7413649 98 3 0.6823232 58 8 0.819552 101 3 0.67962185 68 8 0.819139 88 4 0.6875000 34 2 0.8530057 85 4 0.7416209 92 8 0.7510417 105 8 0.6847042 68 8 0.7621375 136 8 0.6407895 80 6 0.671346 93 8 0.857143 7 0 0.7136878 120 4 0.7028194 109 8 0.7281926 163 8 0.7913348 116 8 0.81399544 160 7 0.7720779 176 3 0.7583651 123 8 0.7699012 0.6897205 0.7065657 0.7528262 0.69625722 0.7288306 0.77323888 0.8168255 0.6336088 0.7973485 0.67893714 0.7608225 0.77115309 0.7854683 0.8069559 0.8560606 0.81890446 0.7876589 0.7955643 0.7307566 0.796891 0.9014418 0.7682393 0.6746633 0.84542553 0.80941240 0.8281718 0.6786616 0.844740 0.8615884 0.7895202 0.6799488 0.7458686 0.7364434 0.693843 0.900027 0.723661 0.6830977 0.8034632 0.8247189 0.8126687 0.84647776 0.8036653 3 0.7373020 0.7523041 -0.01817579 8 0.7679918 0.7107867 0.0572051 0.9782765 5.5284e-01 insignificant 1 1.0000e+00 insignificant 0.96247 0.50362179 insignificant 1 1.00000 insignificant -0.0299814 0.3018359 insignificant 1 insignificant 0.7377506 0.7082569 0.02740236 8 0.7168211 0.7093639 0.00745721 3.7933e-02 5.7547e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 3.1497e-01 5.9645e-01 insignificant 1.00000000 1.00000000 insignificant 0.00280423 0.94215705 insignificant 1.00000 insignificant 0.7381879 0.8387534 -5.8641e-02 7 0.7482854 0.8002113 -0.05192585 9.8660e-01 0.0089879 weaklyHypometh 1.0000e+00 0.99865 insignificant 9.4888e-01 0.0203852 weaklyHypometh 1.00000000 1.00000 insignificant -0.04533506 0.0909772 insignificant 1.00000 insignificant 0.7546729 0.7082569 0.0473058 8 0.7438768 0.7093639 0.0345129 9.8637e-03 0.84906430 weaklyHypermeth 3.2879e-01 1.00000 insignificant 1.5885e-01 0.86599954 insignificant 1.0000e+00 1.00000 insignificant 0.03278564 0.3964479 insignificant 1.00000 insignificant 0.7552448 0.8387534 -0.03600037 7 0.7723349 0.8002113 -0.0278764 9.2128e-01 0.2839521 insignificant 1.00000000 1 insignificant 0.87068448 0.684777 insignificant 1.00000 1 insignificant -0.0153537 0.5359431 insignificant 1.00000 insignificant 0.7082569 0.8385346 -0.09484760 7 0.7093639 0.7752377 -0.0658738 9.7305e-01 7.3544e-04 weaklyHypometh 1.0000e+00 5.6572e-02 weaklyHypometh 9.4472e-01 0.15348906 insignificant 1.00000000 1.00000 insignificant -0.04813929 0.2061213 insignificant 1.00000 insignificant chr5 68544250 68545250 20325 CENPH ENSG00000153044 0.8484524 82 5 0.8333333 6 1 0.6666667 3 0 0.7590000 92 5 0.0000000 1 0 0.8403103 101 5 0.5000000 2 0 1.0000000 1 0 1.000000 1 0 1.0000000 1 0 1.0000000 7 1 NA 0 0 1.000000 2 0 NA 0 0 1.0000000 2 0 NA 0 0 0.7781895 745 4 0.84294872 63 5 0.9000000 10 1 0.7896544 58 5 1.000000 1 0 1.0000000 4 0 0.7666667 29 5 1.0000000 2 0 NA 0 0 1.00000000 30 1 1.000000 1 0 NA 0 0 0.8333333 6 1 0.8695652 23 1 0.9000000 30 1 0.8446154 88 5 0.6666667 9 1 NA 0 0 0.789474 19 1 0.666667 3 0 NA 0 0 0.9565217 23 1 0.7152381 64 5 0.7349321 73 5 0.80278261 117 5 0.9500000 21 1 0.8062696 117 5 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0.7969414 0.8738318 -0.02278786 1 0.8044995 0.8192708 -0.0147713 0.4494601 1.2607e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.69539 0.48115371 lowCoverage 1 1.00000 lowCoverage -0.1120913 0.1087280 lowCoverage 1 lowCoverage 0.8961039 0.8333333 0.06277056 1 0.8961039 0.8333333 0.06277056 1.5421e-01 8.4579e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.7616e-02 9.1792e-01 lowCoverage 1.00000000 1.00000000 lowCoverage 0.03949460 0.67729072 lowCoverage 1.00000 lowCoverage 0.7969414 0.7831633 2.0249e-02 5 0.8044995 0.7822627 0.02223675 1.1562e-01 0.9405256 insignificant 1.0000e+00 1.00000 insignificant 2.8422e-01 0.8786627 insignificant 1.00000000 1.00000 insignificant 0.00748230 0.9199515 lowCoverage 1.00000 lowCoverage 0.9296875 0.8333333 0.0963542 1 0.9296875 0.8333333 0.0963542 3.6819e-02 0.96318121 lowCoverage 9.4407e-01 1.00000 lowCoverage 1.1178e-02 0.99248449 lowCoverage 5.5891e-01 1.00000 lowCoverage 0.15158587 0.1095408 lowCoverage 1.00000 lowCoverage 0.8738318 0.7831633 0.05849676 1 0.8192708 0.7822627 0.0370081 5.6201e-02 0.8554197 lowCoverage 1.00000000 1 lowCoverage 0.38170768 0.799049 lowCoverage 1.00000 1 lowCoverage 0.1195736 0.0440602 lowCoverage 1.00000 lowCoverage 0.8333333 0.8500000 -0.01666667 1 0.8333333 0.8500000 -0.0166667 5.8732e-01 4.1268e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.1195e-01 0.13417029 lowCoverage 1.00000000 1.00000 lowCoverage -0.03201230 0.7055510 lowCoverage 1.00000 lowCoverage chr5 72783050 72784050 20423 ENSG00000183900 0.0261906 745 17 0.0060150 486 15 0.0154999 619 15 0.0054561 383 17 0.0159646 382 15 0.0679667 938 16 0.0301003 581 17 0.0330830 685 15 0.050610 592 15 0.0158057 656 15 0.0683516 556 17 0.0117302 675 15 0.035240 361 15 0.0285714 232 7 0.0143724 789 17 0.002924 451 15 0.1037175 362 12 0.03026836 376 15 0.0058581 421 17 0.0058983 628 15 0.053922 108 11 0.0120946 297 15 0.0336134 249 15 0.0280934 191 15 0.011111 194 15 0.01057569 789 17 0.064349 483 15 0.0583414 337 9 0.0564745 399 17 0.0862991 916 22 0.0098362 624 22 0.0313618 664 22 0.0299672 333 15 0.0572193 256 15 0.200000 309 15 0.015152 160 10 0.0186408 278 14 0.0189130 524 17 0.0569732 786 22 0.0053713 560 20 0.01048951 454 22 0.0112374 551 15 0.0195135 608 15 0.0186535 0.0103432 0.0254811 0.0093239 0.02174007 0.0170808 0.01276846 0.0107551 0.0111691 0.0251430 0.01881474 0.0191741 0.00935612 0.0161701 0.0246188 0.0019873 0.06436149 0.0121395 0.0098436 0.0120121 0.055116 0.0197698 0.0395337 0.0081571 0.01400731 0.01726178 0.0183992 0.0234584 0.022209 0.0053310 0.0062277 0.0165765 0.0542582 0.0726055 0.224117 0.024767 0.034745 0.0251802 0.0216984 0.0095053 0.0171461 0.01884220 0.0183777 15 0.0142883 0.0169588 0.00063070 15 0.0294218 0.0535077 -0.0240859 0.8431290 9.2497e-01 insignificant 1 1.0000e+00 insignificant 0.84845 0.87396447 insignificant 1 1.00000 insignificant -0.0093248 0.3312940 insignificant 1 insignificant 0.0142896 0.0709677 -0.05443377 15 0.0307010 0.0424128 -0.01171174 9.5352e-01 1.3929e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.3949e-01 4.3526e-01 insignificant 1.00000000 1.00000000 insignificant -0.02796743 0.38999869 insignificant 1.00000 insignificant 0.0142896 0.0087868 -3.6181e-04 15 0.0307010 0.0326180 -0.00191700 7.6886e-01 0.1031837 insignificant 1.0000e+00 1.00000 insignificant 8.4906e-01 0.3017593 insignificant 1.00000000 1.00000 insignificant 0.00796423 0.4920628 insignificant 1.00000 insignificant 0.0167779 0.0709677 -0.0547519 15 0.0413414 0.0424128 -0.0010714 9.9616e-01 0.12283736 insignificant 1.0000e+00 1.00000 insignificant 9.8401e-01 0.63518964 insignificant 1.0000e+00 1.00000 insignificant -0.01864267 0.5619024 insignificant 1.00000 insignificant 0.0167779 0.0087868 -0.00074116 15 0.0413414 0.0326180 0.0087233 9.1928e-01 0.3004705 insignificant 1.00000000 1 insignificant 0.91178925 0.465976 insignificant 1.00000 1 insignificant 0.0172890 0.1791385 insignificant 1.00000 insignificant 0.0709677 0.0087868 0.04377023 15 0.0424128 0.0326180 0.0097947 9.3621e-01 9.9584e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.5719e-01 0.99805219 insignificant 1.00000000 1.00000 insignificant 0.03593167 0.2878137 insignificant 1.00000 insignificant chr5 73684550 73685550 20442 ENSG00000210920,ENSG00000222827 0.8392266 388 13 0.8150680 163 12 0.7229315 147 9 0.8530607 305 13 0.8851371 92 10 0.8200406 435 14 0.8176672 100 8 0.8882362 119 8 0.902993 105 9 0.8750510 118 9 0.8420363 269 14 0.8968506 69 6 0.825885 139 10 NA 0 0 0.9537982 79 8 0.757639 63 6 0.9451659 63 5 0.77835654 315 13 0.8286691 110 11 0.8189852 320 14 0.811224 71 7 0.9720696 121 13 0.8198194 250 14 0.9620130 70 6 0.889652 76 8 0.86875000 175 12 0.751479 88 7 0.7281746 34 2 0.8860847 142 13 0.7863273 206 13 0.8530190 221 13 0.8350909 438 14 0.7595947 159 13 0.8615736 153 9 0.758169 329 14 0.714483 84 5 0.8805556 52 4 0.7820839 244 14 0.8713572 336 13 0.8684531 367 13 0.84944106 379 13 0.8381280 283 13 0.8710764 391 13 0.8646074 0.8636072 0.7485254 0.9055836 0.84185900 0.8819132 0.84478362 0.8293167 0.8803909 0.8519298 0.85808187 0.8469147 0.93996849 NA 0.9358500 0.7679997 0.88287015 0.8849493 0.9106218 0.8863362 0.866765 0.9579324 0.8838907 0.9307584 0.83925487 0.91191710 0.8159736 0.8773748 0.899241 0.8340478 0.9136291 0.8541062 0.7991611 0.8061053 0.821799 0.846780 0.864997 0.7986675 0.9062270 0.9298267 0.9006347 0.87920225 0.8937331 3 0.8437776 0.8588795 -0.02053355 13 0.8421268 0.7684239 0.0737029 0.9838101 4.9832e-02 weaklyHypometh 1 1.0000e+00 insignificant 0.91143 0.18964740 insignificant 1 1.00000 insignificant -0.0013544 0.9582493 insignificant 1 insignificant 0.8436856 0.7923604 0.04693428 14 0.8316019 0.7834479 0.04815397 2.6969e-04 9.8619e-01 weaklyHypermeth 1.5728e-02 1.0000e+00 weaklyHypermeth 4.7984e-03 9.1975e-01 weaklyHypermeth 0.39986554 1.00000000 insignificant 0.05287778 0.11394307 insignificant 1.00000 insignificant 0.8436396 0.8855353 -4.3822e-02 13 0.8195734 0.8588591 -0.03928570 9.9592e-01 0.0012479 weaklyHypometh 1.0000e+00 0.41595 insignificant 7.4831e-01 0.1239970 insignificant 1.00000000 1.00000 insignificant -0.01407016 0.3633143 insignificant 1.00000 insignificant 0.8592593 0.7923604 0.0719430 13 0.7863188 0.7834479 0.0028709 3.9878e-06 0.99994908 weaklyHypermeth 3.9878e-04 1.00000 weaklyHypermeth 4.7066e-03 0.99897934 weaklyHypermeth 2.9854e-01 1.00000 insignificant 0.05423216 0.1394095 insignificant 1.00000 insignificant 0.8597141 0.8855353 -0.02191076 13 0.8424844 0.8588591 -0.0163747 9.4881e-01 0.1722037 insignificant 1.00000000 1 insignificant 0.51255820 0.708101 insignificant 1.00000 1 insignificant -0.0127158 0.5844529 insignificant 1.00000 insignificant 0.7919529 0.8855353 -0.09091880 13 0.7679799 0.8588591 -0.0908792 9.9991e-01 2.3526e-06 weaklyHypometh 1.0000e+00 3.9209e-04 weaklyHypometh 9.9548e-01 0.01366107 weaklyHypometh 1.00000000 0.91074 insignificant -0.06694794 0.0521498 insignificant 1.00000 insignificant chr5 73947850 73948850 20449 ENSG00000210920,ENSG00000222827 0.6760142 339 9 0.6141414 114 9 0.4590455 118 9 0.8248196 162 6 0.8632997 53 6 0.7145719 204 9 0.5489061 93 7 0.8182870 101 9 0.490657 53 4 0.6874603 73 8 0.8294097 250 9 0.6318579 67 7 0.764596 175 9 NA 0 0 0.7388889 111 7 0.627525 56 4 0.7237494 66 6 0.56109107 219 9 0.7854233 134 9 0.5944893 202 7 0.662381 56 6 0.3705035 126 6 0.6994958 107 9 0.6099451 66 6 0.911111 56 6 0.60685499 164 9 0.655751 109 7 0.5408730 39 4 0.6178451 75 7 0.8159926 147 7 0.8053735 124 8 0.7809356 257 7 0.8906085 99 7 0.7743225 161 9 0.771870 280 9 0.949802 76 6 0.8261111 65 6 0.8413787 116 9 0.4008615 280 9 0.5150992 309 9 0.53855010 252 9 0.5553401 228 6 0.7241150 241 9 0.6995469 0.7101769 0.5372747 0.8048048 0.84914639 0.7830479 0.73834733 0.7933642 0.6673899 0.8011327 0.84148107 0.7222307 0.80052358 NA 0.7966875 0.6929388 0.74528670 0.6632866 0.8667101 0.6266802 0.717192 0.3542587 0.8996725 0.7049236 0.89358372 0.66414842 0.8081663 0.6486847 0.662292 0.8810215 0.7599686 0.8180370 0.8622233 0.8502310 0.895304 0.925691 0.895931 0.8598446 0.4408996 0.4677767 0.5039878 0.52223074 0.6646370 4 0.7355212 0.7375566 0.00023096 7 0.6812304 0.6506859 0.0305446 0.4032298 8.4707e-01 insignificant 1 1.0000e+00 insignificant 0.77813 0.71208770 insignificant 1 1.00000 insignificant 0.0087132 0.8624945 insignificant 1 insignificant 0.7355212 0.8343789 -0.10300752 9 0.6812304 0.7694843 -0.08825389 9.4182e-01 6.0858e-08 weaklyHypometh 1.0000e+00 3.0429e-05 weaklyHypometh 1.0000e+00 4.9825e-07 weaklyHypometh 1.00000000 0.00049825 weaklyHypometh -0.16054690 0.00093442 weaklyHypometh 0.13349 insignificant 0.7355212 0.5106870 2.2061e-01 9 0.6812304 0.5411631 0.14006731 4.2885e-14 0.9986385 hypermethylated 4.2885e-11 1.00000 hypermethylated 3.0859e-07 0.9900748 hypermethylated 0.00030859 1.00000 hypermethylated 0.13500857 0.0581633 insignificant 1.00000 insignificant 0.7375566 0.8343789 -0.1129195 7 0.6506859 0.7694843 -0.1187985 9.9314e-01 0.00095032 weaklyHypometh 1.0000e+00 0.47516 insignificant 9.9997e-01 0.00012706 weaklyHypometh 1.0000e+00 0.12706 insignificant -0.16926014 0.0038675 weaklyHypometh 0.55777 insignificant 0.7375566 0.5106870 0.22204202 7 0.6506859 0.5411631 0.1095228 8.5369e-07 0.9538397 hypermethylated 0.00028165 1 hypermethylated 0.00035915 0.988234 hypermethylated 0.11972 1 insignificant 0.1262953 0.0886515 insignificant 1.00000 insignificant 0.8343789 0.5106870 0.30567375 9 0.7694843 0.5411631 0.2283212 3.5441e-14 9.9980e-01 hypermethylated 3.5441e-11 1.0000e+00 hypermethylated 8.2372e-07 0.99999946 hypermethylated 0.00082372 1.00000 hypermethylated 0.29555547 0.0021536 weaklyHypermeth 0.53841 insignificant chr5 76104550 76105550 20508 F2R ENSG00000181104 0.7084449 107 8 0.6452294 181 8 0.7008929 62 7 0.6187714 123 8 0.7482098 71 8 0.6202773 93 8 0.7360880 94 7 0.7121280 111 8 0.471429 27 3 0.5861111 44 6 0.5827063 214 8 0.6000000 36 6 0.730903 40 4 0.6927083 68 6 0.6700000 33 4 0.444444 22 2 0.5107848 119 5 0.63311688 120 5 0.6800000 48 3 0.5458333 58 4 0.780952 41 3 0.7833333 24 4 0.7142857 83 8 0.6230159 38 3 0.786144 84 7 0.66613248 100 8 0.695238 40 6 0.8416667 24 2 0.7000361 79 5 0.6115260 84 8 0.7468059 125 8 0.7327038 87 8 0.5906832 129 8 0.6110119 71 6 0.789560 58 5 0.605556 23 3 0.5669643 82 7 0.6755952 113 8 0.7023745 147 7 0.6883929 172 8 0.66039199 241 8 0.8123016 60 5 0.6848344 165 8 0.7469162 0.7024702 0.7074010 0.6307404 0.77956849 0.6419992 0.75060780 0.7225744 0.5820998 0.6532798 0.59844234 0.5767068 0.77827979 0.7369478 0.6902324 0.4620829 0.54683852 0.6980367 0.7008749 0.6208835 0.754490 0.7862908 0.6942054 0.7333620 0.84390308 0.67753064 0.6964574 0.7595096 0.713747 0.6123611 0.7826592 0.7398495 0.5950360 0.6426277 0.733589 0.597762 0.557602 0.6726621 0.7394111 0.7077166 0.6807425 0.75570086 0.7190016 0 0.6738480 0.7156984 -0.03068943 7 0.6268375 0.6613774 -0.0345399 0.9044275 6.8860e-02 insignificant 1 1.0000e+00 insignificant 0.99759 0.00842410 weaklyHypometh 1 1.00000 insignificant -0.0915827 0.0029393 weaklyHypometh 1 insignificant 0.6744745 0.6575630 0.03300601 7 0.6585469 0.6317077 0.02683920 4.6362e-02 8.0252e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 1.2696e-01 7.7854e-01 insignificant 1.00000000 1.00000000 insignificant -0.00799120 0.84137185 insignificant 1.00000 insignificant 0.6744745 0.6968153 -2.0259e-02 8 0.6585469 0.6871803 -0.02863337 6.7831e-01 0.0833063 insignificant 1.0000e+00 1.00000 insignificant 8.1690e-01 0.1187673 insignificant 1.00000000 1.00000 insignificant -0.07775515 0.0430040 weaklyHypometh 1.00000 insignificant 0.7171216 0.6575630 0.0635802 7 0.7017218 0.6317077 0.0700141 2.0596e-02 0.99843369 weaklyHypermeth 5.8845e-01 1.00000 insignificant 5.0753e-03 0.99994267 weaklyHypermeth 2.9854e-01 1.00000 insignificant 0.08359154 0.0611556 insignificant 1.00000 insignificant 0.7171216 0.6968153 0.01250025 7 0.7017218 0.6871803 0.0145415 5.7216e-01 0.7424836 insignificant 1.00000000 1 insignificant 0.16170944 0.933692 insignificant 1.00000 1 insignificant 0.0138276 0.6872447 insignificant 1.00000 insignificant 0.6575630 0.6968153 -0.04753694 7 0.6317077 0.6871803 -0.0554726 9.6138e-01 8.4040e-03 weaklyHypometh 1.0000e+00 3.3616e-01 insignificant 9.9310e-01 0.04513430 weaklyHypometh 1.00000000 1.00000 insignificant -0.06976395 0.1367217 insignificant 1.00000 insignificant chr5 76137450 76138450 20511 ENSG00000210989 0.8216852 287 7 0.4657287 80 4 0.7172249 79 7 0.5789145 150 7 0.7466856 78 7 0.6221176 242 7 0.6567415 74 7 0.6869294 72 4 0.724660 65 6 0.7065208 72 5 0.8245783 231 7 0.8009091 51 4 0.758171 86 7 0.8875000 23 3 0.7699977 112 7 0.722135 71 5 0.7285714 34 6 0.66611524 181 7 0.7826786 94 6 0.8227139 155 7 0.535185 31 2 0.7947802 51 5 0.7679220 143 7 0.6916667 39 2 0.897619 46 4 0.77213029 139 7 0.764670 64 3 0.8166667 35 2 0.4592593 74 5 0.7350845 130 7 0.7249100 125 7 0.6558954 265 7 0.5476190 86 5 0.7118378 77 7 0.662712 95 7 0.972222 47 4 0.8809524 30 2 0.6903122 128 7 0.8059038 242 7 0.8882342 225 7 0.60749827 206 7 0.7704689 165 7 0.8452595 224 7 0.8389622 0.6749763 0.6843580 0.8071518 0.74963678 0.8353288 0.71425730 0.7672235 0.7487280 0.7799961 0.83119123 0.8442710 0.82623232 0.8063074 0.8026702 0.7120428 0.80273973 0.7975703 0.8161301 0.8347826 0.686073 0.8756360 0.8301015 0.9063927 0.86244292 0.77049838 0.8509021 0.7288397 0.735388 0.8255675 0.7881957 0.8723991 0.7661937 0.7089832 0.751487 0.980213 0.880137 0.6898587 0.8708429 0.9080669 0.8687108 0.86797903 0.8824921 2 0.7818507 0.7991228 -0.02045875 7 0.7294202 0.7072927 0.0221275 0.8715058 5.1403e-01 insignificant 1 1.0000e+00 insignificant 0.97219 0.48237545 insignificant 1 1.00000 insignificant 0.0065465 0.8748936 lowCoverage 1 lowCoverage 0.7814748 0.7343413 0.04151267 7 0.6505267 0.6522990 -0.00177225 4.6459e-02 8.7194e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 9.1066e-01 5.9815e-01 insignificant 1.00000000 1.00000000 insignificant -0.01974696 0.77719316 insignificant 1.00000 insignificant 0.7818507 0.8576814 -7.5259e-02 7 0.7294202 0.7815547 -0.05213449 9.9922e-01 0.0026703 weaklyHypometh 1.0000e+00 0.53406 insignificant 9.9995e-01 0.0022237 weaklyHypometh 1.00000000 0.62691 insignificant -0.05894400 0.3089421 insignificant 1.00000 insignificant 0.7996422 0.7343413 0.0634507 7 0.6613442 0.6522990 0.0090453 1.9739e-02 0.77762494 weaklyHypermeth 5.8057e-01 1.00000 insignificant 5.3434e-01 0.67639529 insignificant 1.0000e+00 1.00000 insignificant -0.02629342 0.7250445 lowCoverage 1.00000 lowCoverage 0.7985989 0.8568738 -0.05400815 7 0.6934732 0.7294511 -0.0359779 9.9329e-01 0.0458451 weaklyHypometh 1.00000000 1 insignificant 0.99778588 0.145094 insignificant 1.00000 1 insignificant -0.0654905 0.3013413 lowCoverage 1.00000 lowCoverage 0.7343413 0.8584995 -0.11913955 7 0.6522990 0.7713073 -0.1190084 9.9692e-01 4.7517e-04 weaklyHypometh 1.0000e+00 4.1840e-02 weaklyHypometh 9.6279e-01 0.15528994 insignificant 1.00000000 1.00000 insignificant -0.03919704 0.6340396 insignificant 1.00000 insignificant chr5 76571250 76572250 20523 PDE8B ENSG00000113231 0.7799879 325 13 0.5974768 194 12 0.7194585 126 13 0.7320056 237 13 0.6209745 76 5 0.7833270 304 9 0.6819805 179 10 0.8447646 164 12 0.772922 108 7 0.7229430 164 13 0.7945602 256 13 0.7894584 98 8 0.785043 175 12 0.9500000 36 2 0.8374644 169 13 0.651667 97 8 0.7953077 85 8 0.77880001 258 13 0.6706244 208 13 0.8150307 297 9 0.565329 62 7 0.7337972 100 9 0.6837212 229 13 0.7431299 121 11 0.749014 132 13 0.70744724 302 13 0.792308 104 6 0.7225694 65 7 0.7253346 158 13 0.6633254 206 13 0.6948264 182 13 0.7469002 326 9 0.5557112 153 10 0.6126359 169 13 0.670271 257 13 0.928490 93 8 0.5471678 125 9 0.6328302 288 13 0.7542475 317 13 0.7916931 414 13 0.77776078 310 13 0.7764710 284 13 0.7725932 355 13 0.7956532 0.7027574 0.7119934 0.7946837 0.71858347 0.8006819 0.73831187 0.8171407 0.7655730 0.7437449 0.79403902 0.7997266 0.81017932 0.8206201 0.8245849 0.6812769 0.80019008 0.8084626 0.7647003 0.8132655 0.679944 0.7233972 0.7810466 0.7695459 0.76477469 0.74174971 0.8112869 0.7819712 0.756973 0.7864244 0.7806704 0.7671648 0.6483675 0.6744271 0.722886 0.893703 0.640032 0.7236737 0.8081050 0.8074079 0.7942231 0.78643770 0.8147395 5 0.7649873 0.7564167 0.01059868 13 0.7737995 0.7274582 0.0463412 0.3833265 9.4299e-01 insignificant 1 1.0000e+00 insignificant 0.31197 0.98430739 insignificant 1 1.00000 insignificant 0.0455479 0.0775776 insignificant 1 insignificant 0.7649873 0.7142857 0.04662738 13 0.7737995 0.6434755 0.13032395 7.9770e-03 9.8702e-01 weaklyHypermeth 3.1360e-01 1.0000e+00 insignificant 2.3008e-02 9.9935e-01 weaklyHypermeth 1.00000000 1.00000000 insignificant 0.09833871 0.15348298 insignificant 1.00000 insignificant 0.7644231 0.7791667 -2.9366e-02 13 0.7349685 0.7710373 -0.03606878 9.9457e-01 0.0787974 insignificant 1.0000e+00 1.00000 insignificant 9.4967e-01 0.3548195 insignificant 1.00000000 1.00000 insignificant -0.01836336 0.3598581 insignificant 1.00000 insignificant 0.7564167 0.7142857 0.0374124 13 0.7274582 0.6434755 0.0839827 2.2323e-02 0.63293562 weaklyHypermeth 6.0333e-01 1.00000 insignificant 2.2261e-01 0.95857246 insignificant 1.0000e+00 1.00000 insignificant 0.05279079 0.4113894 insignificant 1.00000 insignificant 0.7573455 0.7791667 -0.04094804 13 0.7243685 0.7710373 -0.0466688 9.9564e-01 0.0159620 weaklyHypometh 1.00000000 1 insignificant 0.98439103 0.015455 weaklyHypometh 1.00000 1 insignificant -0.0639113 0.0027935 weaklyHypometh 0.93118 insignificant 0.7169460 0.7791667 -0.07771263 13 0.7004423 0.7710373 -0.0705950 9.9771e-01 1.2327e-03 weaklyHypometh 1.0000e+00 8.2178e-02 weaklyHypometh 9.9986e-01 0.03675846 weaklyHypometh 1.00000000 1.00000 insignificant -0.11670206 0.0977767 insignificant 1.00000 insignificant chr5 77841350 77842350 20542 LHFPL2 ENSG00000145685 0.3241147 1120 35 0.2559356 1588 37 0.3135105 1281 37 0.3683164 916 29 0.3194529 785 34 0.4037713 1203 34 0.3093609 1196 34 0.4165757 1015 34 0.256563 1184 34 0.3120441 1305 34 0.3735695 1396 34 0.1861461 961 34 0.307808 1040 34 0.4409341 555 18 0.2976691 1265 34 0.239053 888 32 0.0808864 738 25 0.31383420 1005 33 0.3227079 933 35 0.3781139 942 36 0.313436 394 27 0.2806169 595 23 0.4429093 709 37 0.2560794 444 32 0.518789 522 20 0.57486101 1221 37 0.325279 626 33 0.2955655 464 33 0.3454100 1075 34 0.4327288 1565 37 0.3491870 1344 37 0.3152286 1232 34 0.1732323 1085 37 0.0458184 780 34 0.198160 1418 25 0.293962 363 19 0.0761098 900 32 0.4679434 1584 38 0.3368918 1247 33 0.3335312 1180 35 0.31983171 953 29 0.3057804 912 29 0.2498207 1107 27 0.2820095 0.2141878 0.2692055 0.2995426 0.23089624 0.3952905 0.28699508 0.3820575 0.2291809 0.2831793 0.34616849 0.1800657 0.26276748 0.2978633 0.2727359 0.1816686 0.14642672 0.2613393 0.2745776 0.3031744 0.282543 0.2255402 0.4082548 0.2325413 0.39528429 0.55337511 0.2715903 0.3130987 0.314022 0.3511578 0.3020363 0.2487346 0.1470720 0.0364005 0.161287 0.300924 0.025756 0.4441743 0.3070801 0.2836065 0.2736306 0.28006437 0.2324965 27 0.3229455 0.4085462 -0.05620593 34 0.3325052 0.3496980 -0.0171928 1.0000000 2.6258e-10 weaklyHypometh 1 2.6258e-07 weaklyHypometh 1.00000 0.00029474 weaklyHypometh 1 0.29474 insignificant -0.0598224 0.0950339 insignificant 1 insignificant 0.3229470 0.2566906 0.16202596 34 0.3151704 0.2253572 0.08981319 3.4762e-16 6.0050e-07 weaklyHypermeth 1.7381e-13 2.0017e-04 weaklyHypermeth 2.1187e-07 9.2053e-01 weaklyHypermeth 0.00021187 1.00000000 weaklyHypermeth 0.10181417 0.17413164 insignificant 1.00000 insignificant 0.3228638 0.3000556 6.6976e-06 30 0.3120992 0.2888279 0.02327135 6.5301e-02 0.0912878 insignificant 1.0000e+00 1.00000 insignificant 1.7569e-01 0.2149155 insignificant 1.00000000 1.00000 insignificant 0.00184724 0.9402731 insignificant 1.00000 insignificant 0.4088007 0.2568119 0.2156100 37 0.3719203 0.2425715 0.1293488 4.9458e-16 0.96583922 hypermethylated 2.4729e-13 1.00000 hypermethylated 1.2776e-08 0.99999686 hypermethylated 1.2776e-05 1.00000 hypermethylated 0.16163661 0.0521355 insignificant 1.00000 insignificant 0.4087512 0.3000556 0.05518747 30 0.3594247 0.2888279 0.0705968 1.1266e-06 0.9999985 weaklyHypermeth 0.00028165 1 weaklyHypermeth 0.00163339 0.997177 weaklyHypermeth 0.40835 1 insignificant 0.0616697 0.0799035 insignificant 1.00000 insignificant 0.2566531 0.3000556 -0.14791234 30 0.2174565 0.2888279 -0.0713714 1.4457e-01 2.6784e-03 weaklyHypometh 1.0000e+00 1.5286e-01 insignificant 9.3615e-01 0.01573073 weaklyHypometh 1.00000000 0.92534 insignificant -0.09996693 0.1793281 insignificant 1.00000 insignificant chr5 79720450 79721450 20598 ENSG00000206774 0.7747526 96 5 0.7435794 174 5 0.6005013 90 5 0.8244949 30 2 0.7564103 40 5 0.7783069 104 5 0.7121429 82 5 0.7759615 71 5 0.727086 69 3 0.7911819 83 5 0.8124074 157 5 0.7698636 83 3 0.822973 100 5 0.6500000 9 1 0.7379090 88 5 0.791111 67 5 0.6467204 64 3 0.67769231 48 5 0.7486555 83 5 0.7714787 118 5 0.797045 72 5 0.7533333 18 1 0.6865619 68 3 0.7129412 57 5 0.843939 27 2 0.78623932 82 5 0.794585 71 5 0.5851754 46 3 0.7973684 66 5 0.7730138 127 5 0.8282928 121 5 0.7917558 163 5 0.2149854 135 5 0.3426407 87 5 0.322912 181 5 0.800000 12 2 0.4381170 67 5 0.3721248 134 5 0.8028571 48 4 0.8291348 79 5 0.75192308 42 4 0.6500000 47 4 0.8166667 42 4 0.7698142 0.7419023 0.5749320 0.7735419 0.71326165 0.7700688 0.70184332 0.7181762 0.7100526 0.7356238 0.80027582 0.7620658 0.81526688 0.7399346 0.7346549 0.7911589 0.64290669 0.6813896 0.7452020 0.7456140 0.784457 0.7268817 0.6730245 0.7073371 0.82863722 0.78334712 0.7913553 0.5517685 0.788078 0.7732930 0.8160256 0.7736736 0.1843992 0.2946981 0.355633 0.646057 0.425179 0.3650883 0.7781874 0.7817935 0.7520678 0.63978495 0.8204577 1 0.7657385 0.7799564 -0.02127550 5 0.7578553 0.7840460 -0.0261907 0.8915542 8.8178e-02 insignificant 1 1.0000e+00 insignificant 0.80325 0.07503123 insignificant 1 1.00000 insignificant -0.0168596 0.5021340 lowCoverage 1 lowCoverage 0.7657385 0.2435065 0.48066380 5 0.7578553 0.3516213 0.40623397 1.1183e-29 9.9998e-01 hypermethylated 1.1183e-26 1.0000e+00 hypermethylated 1.2835e-06 9.5728e-01 hypermethylated 0.00064174 1.00000000 hypermethylated 0.33053138 0.00973158 lowCoverage 0.97316 lowCoverage 0.7663043 0.7519380 -6.4874e-03 5 0.7982127 0.8135733 -0.01536058 8.5836e-01 0.4156744 insignificant 1.0000e+00 1.00000 insignificant 9.7611e-01 0.4140117 insignificant 1.00000000 1.00000 insignificant -0.02445491 0.5191470 lowCoverage 1.00000 lowCoverage 0.7799564 0.2435065 0.4733023 5 0.7840460 0.3516213 0.4324247 7.6533e-26 0.99999958 hypermethylated 7.6533e-23 1.00000 hypermethylated 6.1679e-07 0.99695822 hypermethylated 3.0840e-04 1.00000 hypermethylated 0.34739095 0.0074024 lowCoverage 0.92530 lowCoverage 0.7799564 0.7509728 0.02216412 5 0.7840460 0.7762880 0.0077581 2.0866e-01 0.2957416 insignificant 1.00000000 1 insignificant 0.41326905 0.478778 insignificant 1.00000 1 insignificant -0.0075953 0.8496340 lowCoverage 1.00000 lowCoverage 0.2435065 0.7509728 -0.39177513 5 0.3516213 0.7762880 -0.4246667 9.9752e-01 1.4303e-11 hypomethylated 1.0000e+00 1.4303e-08 hypomethylated 9.8635e-01 0.00057948 hypomethylated 1.00000000 0.19529 insignificant -0.35498629 0.0060592 lowCoverage 1.00000 lowCoverage chr5 81182950 81183950 20616 SSBP2 ENSG00000145687 0.1293324 719 14 0.0337033 902 14 0.0000000 634 15 0.0594699 688 14 0.0013748 591 16 0.1465443 1218 14 0.0101973 855 15 0.1200000 827 16 0.047139 724 16 0.0040195 692 14 0.0087459 815 17 0.0333881 444 15 0.088636 642 18 0.0018939 475 12 0.0028970 1011 14 0.022727 596 18 0.0543478 263 11 0.00325477 937 14 0.0140804 944 14 0.1010457 956 14 0.051999 263 17 0.1260246 471 14 0.0525459 457 14 0.0474747 619 18 0.136616 363 14 0.02454681 1064 15 0.070842 845 14 0.0274945 379 19 0.1107628 768 14 0.0222541 1141 15 0.0454545 1029 17 0.1535062 1031 14 0.0588235 478 14 0.0025253 299 14 0.058824 304 14 0.105263 131 9 0.0718070 536 18 0.0952381 734 14 0.0030284 1202 14 0.0579710 866 15 0.00075758 871 14 0.1187783 679 15 0.0541137 927 14 0.0073633 0.0026899 0.0000000 0.0010652 0.00313461 0.0045757 0.00952442 0.0000000 0.0045202 0.0021178 0.00095975 0.0033426 0.00475467 0.0031539 0.0012997 0.0000000 0.00025343 0.0027667 0.0021490 0.0025825 0.013054 0.0021867 0.0087236 0.0022462 0.00058482 0.00192990 0.0016885 0.0097483 0.013799 0.0051138 0.0000000 0.0053607 0.0000000 0.0060631 0.000000 0.000000 0.007234 0.0000000 0.0033624 0.0000000 0.0011015 0.00019119 0.0079511 13 0.0054253 0.0081880 -0.00131110 14 0.0711129 0.0675153 0.0035976 0.9753824 7.4689e-01 insignificant 1 1.0000e+00 insignificant 0.98666 0.78030661 insignificant 1 1.00000 insignificant -0.0283202 0.1133623 insignificant 1 insignificant 0.0051591 0.0088710 0.00048111 14 0.0666920 0.1467660 -0.08007395 6.8242e-01 9.9760e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.1576e-01 9.9809e-01 insignificant 1.00000000 1.00000000 insignificant -0.02127353 0.26899528 insignificant 1.00000 insignificant 0.0054304 0.0041859 -2.9351e-06 14 0.0765831 0.1167083 -0.04012516 9.6483e-01 0.5798017 insignificant 1.0000e+00 1.00000 insignificant 9.9595e-01 0.9548955 insignificant 1.00000000 1.00000 insignificant -0.00278990 0.9118250 insignificant 1.00000 insignificant 0.0081909 0.0084643 0.0018270 14 0.0761887 0.1097290 -0.0335402 8.6291e-01 0.99845859 insignificant 1.0000e+00 1.00000 insignificant 7.9449e-01 0.99995105 insignificant 1.0000e+00 1.00000 insignificant 0.00704663 0.7305690 insignificant 1.00000 insignificant 0.0081967 0.0041859 0.00101873 14 0.0727088 0.1167083 -0.0439995 9.6385e-01 0.8447749 insignificant 1.00000000 1 insignificant 0.99442619 0.984402 insignificant 1.00000 1 insignificant 0.0255303 0.3492886 insignificant 1.00000 insignificant 0.0084814 0.0039665 -0.00065658 14 0.1185073 0.0813766 0.0371307 1.0000e+00 8.6631e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.0000e+00 0.98642758 insignificant 1.00000000 1.00000 insignificant 0.01848364 0.5029280 insignificant 1.00000 insignificant chr5 90611850 90612850 20791 ENSG00000199643 0.0020785 739 11 0.0039526 504 11 0.0047847 377 11 0.0018092 756 11 0.0000000 191 11 0.0042637 776 11 0.0017483 402 11 0.0022727 361 11 0.000000 471 11 0.0000000 481 11 0.0020202 369 11 0.0058278 436 11 0.000000 578 11 0.0046620 245 11 0.0061891 556 11 0.000000 230 11 0.0000000 275 11 0.00463942 621 11 0.0000000 188 11 0.0032243 647 11 0.000000 178 7 0.0021645 498 11 0.0151833 413 11 0.0020243 299 11 0.000000 338 11 0.00753025 477 11 0.000000 438 11 0.0000000 186 11 0.0131118 444 11 0.0041800 479 11 0.0060673 437 11 0.0029039 753 11 0.0021142 403 11 0.0041322 305 11 0.000000 592 11 0.000000 153 11 0.0098352 190 11 0.0000000 455 11 0.0016529 1012 11 0.0025811 838 11 0.00256669 816 11 0.0010989 602 11 0.0076561 912 11 0.0025929 0.0047803 0.0059245 0.0023436 0.00000000 0.0050723 0.00285578 0.0024346 0.0000000 0.0000000 0.00279232 0.0068707 0.00000000 0.0061558 0.0073556 0.0000000 0.00000000 0.0049485 0.0000000 0.0034894 0.000000 0.0018948 0.0127645 0.0033067 0.00000000 0.00672553 0.0000000 0.0000000 0.011486 0.0049308 0.0054592 0.0031706 0.0023134 0.0036173 0.000000 0.000000 0.010581 0.0000000 0.0018087 0.0027056 0.0030268 0.00142109 0.0085295 11 0.0032598 0.0042510 -0.00089992 11 0.0023811 0.0038742 -0.0014932 0.8814180 2.6039e-01 insignificant 1 1.0000e+00 insignificant 0.89970 0.30085619 insignificant 1 1.00000 insignificant -0.0020568 0.2128701 insignificant 1 insignificant 0.0032641 0.0019066 0.00168227 11 0.0028140 0.0020878 0.00072616 4.8092e-01 9.5559e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.3583e-01 9.8772e-01 insignificant 1.00000000 1.00000000 insignificant -0.00030664 0.85921816 insignificant 1.00000 insignificant 0.0032598 0.0035885 -2.7165e-04 11 0.0023811 0.0027833 -0.00040221 9.9224e-01 0.8484050 insignificant 1.0000e+00 1.00000 insignificant 9.9911e-01 0.6272289 insignificant 1.00000000 1.00000 insignificant -0.00073751 0.5838802 insignificant 1.00000 insignificant 0.0042622 0.0019066 0.0021801 11 0.0045787 0.0020878 0.0024908 2.6021e-01 0.97789763 insignificant 1.0000e+00 1.00000 insignificant 3.7063e-01 0.97535983 insignificant 1.0000e+00 1.00000 insignificant 0.00175018 0.4358279 insignificant 1.00000 insignificant 0.0042510 0.0035885 0.00064365 11 0.0038742 0.0027833 0.0010910 8.3442e-01 0.5287530 insignificant 1.00000000 1 insignificant 0.93123678 0.474092 insignificant 1.00000 1 insignificant 0.0013193 0.4985249 insignificant 1.00000 insignificant 0.0019066 0.0035902 -0.00179190 11 0.0020878 0.0032893 -0.0012015 9.9875e-01 4.7714e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9990e-01 0.49324828 insignificant 1.00000000 1.00000 insignificant -0.00043087 0.8318122 insignificant 1.00000 insignificant chr5 93794150 93795150 20835 ENSG00000218494 0.8396593 178 8 0.8244792 82 7 0.6676923 49 5 0.8072799 195 5 0.7153846 44 5 0.8689309 113 5 0.6294643 62 5 0.7809524 95 5 0.600000 36 4 0.8000000 17 0 0.7687538 154 8 0.7187500 29 3 0.916667 39 5 0.7666667 37 3 0.7010417 41 5 1.000000 4 0 1.0000000 1 0 0.75823874 140 7 0.8125000 42 5 0.8598485 89 5 1.000000 11 2 0.7222222 8 0 0.6216667 64 5 0.9333333 25 4 0.816667 37 2 0.86882411 125 5 0.648413 35 4 0.7500000 12 2 0.7380952 37 5 0.8637153 126 8 0.7160920 101 5 0.7526415 110 5 0.7612075 70 5 0.7629870 51 5 0.645238 179 5 0.600000 5 0 0.8083333 57 5 0.8020833 77 5 0.7705858 207 6 0.8450591 138 8 0.59887566 189 5 0.5228395 40 4 0.7646584 158 8 0.9788527 0.9898990 0.8447552 0.9328251 0.93240093 0.8937272 0.87554113 0.9353535 0.9056277 0.9784954 0.97685648 0.8838384 0.97474747 0.8383838 0.8060606 0.9784954 0.94875212 0.9559667 0.9621212 0.9522498 0.968106 0.8896635 0.8787879 1.0000000 0.92525253 0.93322554 0.7582492 0.7458842 0.978355 0.9772727 0.9064875 0.9380146 0.8571429 0.8849862 0.971140 1.000000 0.969697 1.0000000 0.9281021 0.9584869 0.9302613 0.90976431 0.9887245 0 0.8044229 0.8147612 0.00553130 5 0.8004399 0.8165037 -0.0160638 0.7914733 8.3025e-01 insignificant 1 1.0000e+00 insignificant 0.63197 0.96065581 insignificant 1 1.00000 insignificant 0.0058430 0.8865635 lowCoverage 1 lowCoverage 0.8041667 0.8223235 -0.00043730 5 0.7713832 0.7575777 0.01380549 3.0472e-01 3.7786e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.1560e-01 4.9768e-01 insignificant 1.00000000 1.00000000 insignificant 0.06184056 0.17772709 lowCoverage 1.00000 lowCoverage 0.8042877 0.8565574 -1.4897e-03 5 0.7782665 0.7185072 0.05975935 3.4759e-01 0.7060310 insignificant 1.0000e+00 1.00000 insignificant 1.8771e-01 0.9333669 insignificant 1.00000000 1.00000 insignificant 0.09141175 0.2120743 lowCoverage 1.00000 lowCoverage 0.8142235 0.8223235 -0.0081934 5 0.7706297 0.7575777 0.0130520 4.9140e-01 0.39671962 insignificant 1.0000e+00 1.00000 insignificant 6.6508e-01 0.36955837 insignificant 1.0000e+00 1.00000 insignificant 0.05599759 0.2657405 lowCoverage 1.00000 lowCoverage 0.8144928 0.8565574 -0.00970647 5 0.7961152 0.7185072 0.0776081 6.9046e-01 0.6523211 insignificant 1.00000000 1 insignificant 0.69886449 0.854043 insignificant 1.00000 1 insignificant 0.0855688 0.2530168 lowCoverage 1.00000 lowCoverage 0.8223235 0.8587106 -0.00262722 5 0.7575777 0.7666539 -0.0090762 6.1283e-01 5.8687e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.9436e-01 0.81369178 insignificant 1.00000000 1.00000 insignificant 0.02957118 0.6842607 lowCoverage 1.00000 lowCoverage chr5 98310150 98311150 20954 ENSG00000200351 0.8706643 287 9 0.6153292 168 9 0.6570467 93 9 0.7495531 189 9 0.6665202 116 9 0.8370484 489 9 0.7212561 119 8 0.7548157 159 8 0.654272 87 8 0.7130752 124 8 0.8457841 219 9 0.7651838 100 7 0.841194 129 8 0.8008658 28 3 0.7501102 118 8 0.518215 51 3 0.6804654 111 9 0.73668731 182 9 0.7964259 172 9 0.8054548 334 9 0.651915 190 6 0.7648479 93 7 0.7515434 209 9 0.7051499 144 7 0.656885 147 5 0.76325719 217 9 0.759252 324 7 0.6167754 94 7 0.6966524 97 7 0.7353491 165 8 0.8185280 154 8 0.7970215 265 9 0.6938168 172 8 0.7428900 120 8 0.701133 148 8 0.711793 74 7 0.6324916 83 6 0.6903128 182 8 0.7929792 256 9 0.7117211 261 9 0.83025974 202 9 0.7775105 197 8 0.7844800 285 9 0.8734927 0.6792672 0.6883452 0.7789412 0.74350544 0.8237402 0.75441177 0.7793153 0.7315624 0.7703606 0.81656925 0.7981922 0.87018230 0.7759256 0.8276693 0.6494640 0.72991543 0.7571853 0.8011502 0.8093598 0.659861 0.7996320 0.7652948 0.7791980 0.68866206 0.79771808 0.7862589 0.7758257 0.729119 0.7448889 0.8259835 0.7989094 0.7580607 0.7770943 0.732705 0.746076 0.744212 0.7187616 0.8292064 0.8055114 0.8508054 0.80855247 0.8065958 6 0.7881382 0.7370176 0.03532046 9 0.8078630 0.7215901 0.0862728 0.0025709 8.8888e-01 weaklyHypermeth 1 1.0000e+00 insignificant 0.20009 0.24056581 insignificant 1 1.00000 insignificant 0.0125670 0.6405468 insignificant 1 insignificant 0.7879437 0.7509628 0.04843658 8 0.7886492 0.7259786 0.06267068 1.1346e-04 9.5051e-01 weaklyHypermeth 8.0458e-03 1.0000e+00 weaklyHypermeth 4.1007e-02 9.3517e-01 weaklyHypermeth 1.00000000 1.00000000 insignificant 0.04359217 0.09212166 insignificant 1.00000 insignificant 0.7879437 0.8059950 -2.3913e-02 9 0.7886492 0.7152403 0.07340897 9.7540e-01 0.3146472 insignificant 1.0000e+00 1.00000 insignificant 8.9703e-01 0.0655623 insignificant 1.00000000 1.00000 insignificant -0.04039173 0.1657354 insignificant 1.00000 insignificant 0.7379475 0.7509628 0.0157025 8 0.7687491 0.7259786 0.0427706 2.5649e-04 0.22000408 weaklyHypermeth 1.8321e-02 1.00000 weaklyHypermeth 3.0120e-03 0.44070068 weaklyHypermeth 2.1514e-01 1.00000 insignificant 0.03102521 0.1993336 insignificant 1.00000 insignificant 0.7379475 0.8059950 -0.04595154 9 0.7687491 0.7152403 0.0535089 9.8650e-01 0.0069185 weaklyHypometh 1.00000000 1 insignificant 0.64177706 0.030688 weaklyHypometh 1.00000 1 insignificant -0.0529587 0.0684238 insignificant 1.00000 insignificant 0.7509628 0.8059950 -0.07451002 8 0.7259786 0.7152403 0.0107383 9.9630e-01 2.8318e-04 weaklyHypometh 1.0000e+00 3.1464e-02 weaklyHypometh 9.9897e-01 0.00617359 weaklyHypometh 1.00000000 0.56124 insignificant -0.08398390 0.0086366 weaklyHypometh 1.00000 insignificant chr5 106935050 106936050 21047 A,ENSG00000209177 0.0666326 323 7 0.0067599 447 7 0.0569503 321 7 0.1670956 226 7 0.0128205 291 7 0.145461 645 7 0.1740055 363 7 0.0558976 415 7 0.0296771 309 7 0.0182367 242 7 0.0522937 483 7 0.0482679 214 7 0.0094388 299 7 0.0463980 133 6 0.0305089 402 7 0.0251502 209 7 0.0483871 51 2 0.1662840 336 7 0.01228221 484 7 0.1649408 436 7 0.059091 111 7 0.0092866 205 7 0.042593 205 7 0.1655556 166 7 0.033578 98 7 0.1386062 512 7 0.022278 369 7 0.066667 180 10 0.0501672 357 7 0.1400977 549 7 0.0148423 497 7 0.0748172 503 7 0.0138019 302 7 0.0183983 175 7 0.038328 479 7 0.0000000 44 5 0.000000 403 7 0.0056440 527 7 0.0104969 536 7 0.018646 310 7 0.0175048 279 7 0.0302891 213 7 0.029153 319 7 0.1129272 0.0142928 0.0858730 0.0758415 0.03164112 0.129846 0.0844663 0.0863033 0.0535269 0.0393715 0.0993610 0.0788744 0.0166362 0.0716240 0.0437229 0.04514938 0.0379169 0.0744779 0.02410581 0.0601729 0.1211775 0.0117763 0.068982 0.1271481 0.0608715 0.0587061 0.0457648 0.0515539 0.08962232 0.0270670 0.0284907 0.1221738 0.01444926 0.0153870 0.0323717 0.0007364 0.000000 0.0065091 0.0154054 0.0200987 0.0198064 0.0254547 0.047284 7 0.0570222 0.0503731 0.00337520 7 0.105014 0.070605 0.0344093 0.3251045 9.9494e-01 insignificant 1 1.0000e+00 insignificant 0.503121 9.7799e-01 insignificant 1 1.000000 insignificant -0.0012571 0.950958 insignificant 1 insignificant 0.0570997 0.0113990 0.04586219 7 0.114561 0.0070329 0.10752796 4.3980e-04 9.9762e-01 weaklyHypermeth 1.0471e-02 1.0000e+00 weaklyHypermeth 6.3486e-04 9.9999e-01 weaklyHypermeth 2.2674e-02 1.0000e+00 weaklyHypermeth 0.0541791 1.1588e-03 weaklyHypermeth 4.6353e-02 weaklyHypermeth 0.0568147 0.025951 3.6674e-02 7 0.084463 0.016373 0.0680898 7.9509e-02 9.4330e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.7298e-02 6.3181e-01 weaklyHypermeth 1.0000e+00 1.00000000 insignificant 0.0456564 3.5129e-03 weaklyHypermeth 0.21698178 insignificant 0.050454 0.0113990 0.04134756 7 0.077023 0.0070329 0.0699906 6.9396e-03 9.8559e-01 weaklyHypermeth 1.2392e-01 1.0000e+00 insignificant 7.2653e-03 9.9929e-01 weaklyHypermeth 1.7298e-01 1.0000e+00 insignificant 0.0554363 4.3110e-03 weaklyHypermeth 1.6581e-01 insignificant 0.0501340 0.025951 0.03317022 7 0.0643779 0.016373 0.0480044 3.9705e-01 4.6973e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.3059e-01 3.9936e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0469135 1.0754e-02 weaklyHypermeth 0.7681705 insignificant 0.0114167 0.0259662 -0.0142132 7 0.0096702 0.018420 -0.0087499 9.7606e-01 3.0880e-05 weaklyHypometh 1.0000e+00 1.1437e-03 weaklyHypometh 9.7689e-01 8.2887e-04 weaklyHypometh 1.0000e+00 3.9713e-02 weaklyHypometh -0.0085228 2.5953e-01 insignificant 1.0000e+00 insignificant chr5 110894050 110895050 21090 STARD4 A,ENSG00000164211 0.6518364 264 9 0.6015951 201 12 0.5898234 152 12 0.7112726 199 12 0.7648851 134 13 0.744747 319 10 0.7141507 204 13 0.7419712 201 11 0.5684524 105 9 0.7994780 89 8 0.7352213 380 13 0.7803103 110 9 0.7643084 115 9 0.6833333 31 4 0.6803006 109 8 0.6732804 72 5 0.7143895 137 9 0.8166440 175 11 0.82588305 196 12 0.8369348 293 9 0.724432 87 8 0.8067460 60 6 0.850954 151 9 0.6624516 99 10 0.835109 126 10 0.7150527 363 13 0.659188 80 6 0.747685 34 1 0.8626832 123 7 0.7013854 271 12 0.6300702 255 13 0.7542732 354 12 0.5682005 170 11 0.6647548 113 10 0.670008 211 12 0.7640046 120 9 0.623529 190 11 0.7249690 294 11 0.7888956 274 12 0.802282 360 13 0.7897031 304 13 0.7670461 259 9 0.676588 292 13 0.7324121 0.6755632 0.6552444 0.8079972 0.79153169 0.785616 0.7435906 0.7851975 0.6971420 0.8358803 0.8124425 0.7638223 0.9018263 0.8193896 0.7176352 0.77373521 0.7459507 0.7907927 0.85765870 0.8592887 0.8087559 0.8261771 0.827041 0.7728484 0.8330359 0.7777879 0.7720974 0.8392008 0.82694704 0.7586239 0.7730302 0.7765786 0.68480246 0.7362529 0.7528710 0.7570518 0.678721 0.7315811 0.8513652 0.8462148 0.7990174 0.8503244 0.823886 4 0.7685026 0.7453727 0.00932236 12 0.718952 0.696045 0.0229067 0.3482573 8.3611e-01 insignificant 1 1.0000e+00 insignificant 0.580908 2.1417e-01 insignificant 1 1.000000 insignificant -0.0258950 0.372642 insignificant 1 insignificant 0.7685451 0.6873857 0.05346334 12 0.708145 0.6649522 0.04319303 1.1628e-02 9.9939e-01 weaklyHypermeth 1.9380e-01 1.0000e+00 insignificant 1.3464e-02 9.9457e-01 weaklyHypermeth 2.8049e-01 1.0000e+00 insignificant 0.0506966 1.6264e-01 insignificant 1.0000e+00 insignificant 0.7687446 0.826496 -4.4455e-02 12 0.748145 0.742980 0.0051656 9.9745e-01 2.8150e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.6066e-01 5.5690e-02 insignificant 1.0000e+00 1.00000000 insignificant -0.0449622 1.4937e-01 insignificant 1.00000000 insignificant 0.745373 0.6870438 0.04511276 12 0.696045 0.6455461 0.0504990 1.0293e-02 9.9525e-01 weaklyHypermeth 1.6874e-01 1.0000e+00 insignificant 3.0116e-03 9.9973e-01 weaklyHypermeth 8.6047e-02 1.0000e+00 weaklyHypermeth 0.0765916 5.8724e-02 insignificant 1.0000e+00 insignificant 0.7457457 0.826058 -0.05725002 12 0.7254568 0.714394 0.0110630 9.9835e-01 2.8154e-03 weaklyHypometh 1.0000e+00 2.8154e-01 insignificant 9.6712e-01 4.9365e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0190672 5.6425e-01 insignificant 1.0000000 insignificant 0.6867580 0.8258238 -0.1063016 12 0.6233927 0.696543 -0.0731508 9.9958e-01 1.2144e-05 weaklyHypometh 1.0000e+00 4.6708e-04 weaklyHypometh 9.9998e-01 5.9974e-04 weaklyHypometh 1.0000e+00 3.8303e-02 weaklyHypometh -0.0956588 2.8085e-02 weaklyHypometh 6.9978e-01 insignificant chr5 112566150 112567150 21139 DCP2 A,ENSG00000172795 0.7063412 621 11 0.5695738 449 14 0.5692328 368 13 0.5540054 470 11 0.6353493 221 12 0.614746 534 14 0.6847212 297 13 0.5755027 346 13 0.5939672 293 11 0.5999533 217 11 0.7865032 592 14 0.3691637 175 11 0.3465673 365 11 0.5708222 75 2 0.3101616 351 11 0.4769021 188 13 0.3660152 157 9 0.5883288 494 11 0.69798927 331 11 0.5111159 549 13 0.701677 221 10 0.1989865 295 11 0.718073 325 14 0.5141940 220 13 0.534545 183 8 0.4576496 582 14 0.608427 292 12 0.629921 158 11 0.5279997 302 11 0.4534939 686 14 0.5734083 541 14 0.8393998 677 14 0.4918764 362 14 0.4775484 267 11 0.511218 798 10 0.4952201 88 8 0.436959 301 13 0.6376962 531 14 0.1395813 772 14 0.103006 527 14 0.1698964 542 12 0.2399295 464 10 0.252582 606 12 0.7161319 0.6114907 0.5652752 0.5771223 0.67993275 0.628075 0.7266394 0.5787250 0.6028548 0.6221852 0.8081494 0.4395901 0.2578071 0.5394424 0.3879037 0.60014856 0.4559607 0.5054165 0.70635242 0.5007137 0.8300202 0.2279763 0.707247 0.5292588 0.5425476 0.5476727 0.6116522 0.6604924 0.58999591 0.4566585 0.5844275 0.8280492 0.58744860 0.5013623 0.6341292 0.5035656 0.546155 0.6837648 0.1291423 0.0954364 0.0693638 0.0743007 0.218688 8 0.5894544 0.5897321 -0.00162546 13 0.540362 0.531127 0.0092353 0.6408675 8.7347e-01 insignificant 1 1.0000e+00 insignificant 0.917321 7.0757e-01 insignificant 1 1.000000 insignificant -0.0067999 0.902290 insignificant 1 insignificant 0.5894796 0.6514700 -0.03421992 13 0.542885 0.4921430 0.05074209 4.5484e-08 9.8182e-08 weaklyHypometh 1.6244e-06 3.2727e-05 weaklyHypometh 7.4522e-05 1.7114e-03 weaklyHypometh 3.5487e-03 4.2786e-01 weaklyHypometh 0.0479284 2.4693e-01 insignificant 1.0000e+00 insignificant 0.5894796 0.132600 4.4557e-01 11 0.542885 0.173611 0.3692742 2.9450e-50 9.9962e-01 hypermethylated 1.4725e-47 1.0000e+00 hypermethylated 1.6271e-25 9.9993e-01 hypermethylated 8.1355e-23 1.00000000 hypermethylated 0.3753490 4.0169e-07 hypermethylated 0.00040169 hypermethylated 0.589996 0.6514700 -0.01610505 14 0.564323 0.4921430 0.0721796 1.5205e-04 5.9529e-05 weaklyHypometh 3.7085e-03 1.9843e-02 weaklyHypometh 5.7593e-05 5.6571e-02 inconclusive 3.3878e-03 1.0000e+00 inconclusive 0.0547283 3.2828e-01 insignificant 1.0000e+00 insignificant 0.5899955 0.132600 0.44361754 12 0.5643226 0.173611 0.3907117 2.0156e-33 1.0000e+00 hypermethylated 1.0078e-30 1.0000e+00 hypermethylated 9.3668e-23 1.0000e+00 hypermethylated 9.3668e-20 1.0000000 hypermethylated 0.3821489 4.4159e-06 hypermethylated 0.0022080 hypermethylated 0.6514700 0.1326005 0.4199121 12 0.4921430 0.173611 0.3185321 3.8435e-29 9.9962e-01 hypermethylated 1.2812e-26 1.0000e+00 hypermethylated 7.2269e-08 9.9986e-01 hypermethylated 2.4090e-05 1.0000e+00 hypermethylated 0.3274206 2.0868e-05 hypermethylated 3.4780e-03 hypermethylated chr5 112566850 112567850 21140 DCP2 A,ENSG00000172795 0.7267629 652 15 0.6517200 556 17 0.6611582 401 17 0.6499292 401 11 0.7055603 209 14 0.688516 496 17 0.8009816 312 17 0.6624688 469 17 0.6769306 308 15 0.6573614 270 15 0.8357504 643 17 0.5132609 182 13 0.4593101 483 15 0.6894737 43 1 0.4477503 410 15 0.4783730 190 13 0.5460853 208 14 0.6405061 495 15 0.72705643 377 15 0.5312820 590 17 0.779621 236 12 0.2523874 277 11 0.750086 386 17 0.5845616 215 17 0.515748 116 8 0.5544729 691 17 0.651663 265 16 0.723600 150 13 0.6167924 418 14 0.5405871 825 17 0.6715066 618 17 0.8433264 763 17 0.6458054 504 17 0.6559915 332 15 0.625000 856 13 0.6446429 96 8 0.616265 236 16 0.7412231 628 17 0.2217237 697 17 0.234215 548 17 0.2209408 453 13 0.2869345 489 14 0.389822 518 13 0.7049818 0.6529949 0.5947123 0.6127148 0.70493283 0.622171 0.7522716 0.5931187 0.6157987 0.6199563 0.8253360 0.4628669 0.3143349 0.5621841 0.3769519 0.57665044 0.4870145 0.5358268 0.70441755 0.4785595 0.8142180 0.1948689 0.705588 0.5277088 0.5229654 0.5688931 0.6315201 0.7146016 0.61496418 0.4923991 0.6195543 0.8350139 0.66020865 0.6454735 0.6681807 0.4965314 0.647815 0.7607375 0.0914661 0.0951089 0.0671521 0.0923626 0.223827 8 0.6454841 0.6617588 -0.00781676 17 0.615707 0.613362 0.0023450 0.7490622 6.8230e-01 insignificant 1 1.0000e+00 insignificant 0.964486 6.0374e-01 insignificant 1 1.000000 insignificant 0.0138157 0.789249 insignificant 1 insignificant 0.6455219 0.7835596 -0.09845348 17 0.622135 0.6415195 -0.01938440 5.0307e-04 5.7781e-12 weaklyHypometh 1.1433e-02 2.8890e-09 weaklyHypometh 8.9954e-03 4.8644e-07 weaklyHypometh 1.9990e-01 2.4322e-04 weaklyHypometh -0.0173094 5.7483e-01 insignificant 1.0000e+00 insignificant 0.6455219 0.145656 4.2617e-01 15 0.622135 0.249004 0.3731312 1.3116e-51 1.0000e+00 hypermethylated 1.3116e-48 1.0000e+00 hypermethylated 1.1695e-25 1.0000e+00 hypermethylated 8.1355e-23 1.00000000 hypermethylated 0.3667846 6.5317e-06 hypermethylated 0.00217724 hypermethylated 0.662026 0.7835596 -0.08000253 17 0.647438 0.6415195 0.0059181 3.6755e-02 1.9197e-07 weaklyHypometh 5.2944e-01 9.5985e-05 weaklyHypometh 5.6646e-03 1.5338e-04 weaklyHypometh 1.4907e-01 7.6689e-02 weaklyHypometh -0.0311251 5.3001e-01 insignificant 1.0000e+00 insignificant 0.6620258 0.145656 0.43765947 15 0.6474376 0.249004 0.3984338 1.4690e-35 1.0000e+00 hypermethylated 1.4690e-32 1.0000e+00 hypermethylated 1.0975e-21 1.0000e+00 hypermethylated 5.4875e-19 1.0000000 hypermethylated 0.3529689 1.3447e-05 hypermethylated 0.0044822 hypermethylated 0.7835596 0.1456562 0.4971674 15 0.6415195 0.249004 0.3925156 1.3889e-37 1.0000e+00 hypermethylated 6.9446e-35 1.0000e+00 hypermethylated 2.5013e-10 1.0000e+00 hypermethylated 1.2506e-07 1.0000e+00 hypermethylated 0.3840941 2.8564e-05 hypermethylated 4.0806e-03 hypermethylated chr5 113540750 113541750 21149 YTHDC2 A,ENSG00000047188 0.6913239 220 6 0.6098398 78 6 0.5664983 79 6 0.7346818 124 6 0.6736597 58 6 0.696474 264 6 0.7045207 95 6 0.6996065 77 6 0.6345520 76 6 0.6774510 93 6 0.7159130 137 6 0.7394734 74 6 0.6112745 108 6 NA 0 0 0.5863095 98 6 0.7555556 67 5 0.5566239 76 6 0.6888816 128 6 0.67704493 119 6 0.7204540 263 6 0.741382 153 3 0.7529570 69 6 0.696421 127 6 0.7368132 74 5 0.766534 46 6 0.6774250 114 6 0.684957 92 5 0.660256 100 3 0.6618967 96 6 0.6445378 131 6 0.6705628 106 6 0.6810336 263 6 0.5118481 76 6 0.6828704 58 6 0.661158 115 6 0.8294872 69 6 0.709526 88 4 0.7557925 119 6 0.7087868 244 6 0.720983 217 6 0.7032460 180 6 0.7488625 176 6 0.719530 216 6 0.7383392 0.6558550 0.6015152 0.7568284 0.72944833 0.745309 0.7478595 0.7241656 0.6626784 0.7240523 0.7428809 0.7713251 0.6534423 NA 0.6347222 0.78888889 0.5602707 0.7306434 0.72122269 0.7453344 0.7711396 0.7924731 0.737737 0.7484615 0.7780203 0.7229101 0.6964574 0.6891738 0.70628507 0.7060380 0.7008369 0.7161769 0.57785822 0.6945062 0.6964702 0.8476068 0.732061 0.7698431 0.7458589 0.7501592 0.7372000 0.7833925 0.754440 4 0.7005372 0.7571116 -0.00551013 6 0.678990 0.683546 -0.0045557 0.7378024 4.8718e-01 insignificant 1 1.0000e+00 insignificant 0.681338 2.5739e-01 insignificant 1 1.000000 insignificant -0.0273645 0.139816 insignificant 1 insignificant 0.7005372 0.7295238 0.00368065 6 0.678990 0.6869778 -0.00798802 6.3303e-01 6.3534e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.0952e-01 2.7071e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0212468 6.5757e-01 insignificant 1.0000e+00 insignificant 0.7005372 0.722168 -3.6801e-02 6 0.678990 0.718205 -0.0392151 9.1998e-01 2.5805e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 8.7975e-01 1.7710e-02 weaklyHypometh 1.0000e+00 0.98605411 insignificant -0.0497481 4.6628e-03 weaklyHypometh 0.24541293 insignificant 0.757112 0.7295238 0.00991017 6 0.683546 0.6869778 -0.0034323 3.7046e-01 7.1567e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.5333e-01 8.2303e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0061177 8.9665e-01 insignificant 1.0000e+00 insignificant 0.7571116 0.722168 -0.03042951 6 0.6835455 0.718205 -0.0346594 9.1766e-01 1.1450e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.8924e-01 2.2056e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0223836 1.3529e-01 insignificant 1.0000000 insignificant 0.7295238 0.7221684 -0.0425168 6 0.6869778 0.718205 -0.0312271 8.6851e-01 1.9714e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.1627e-01 6.7937e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0285013 5.4585e-01 insignificant 1.0000e+00 insignificant chr5 118688350 118689350 21188 A,ENSG00000222450 0.7572067 283 6 0.7552832 119 8 0.6621693 109 6 0.7619826 124 6 0.8430181 65 6 0.736085 335 9 0.8070490 83 6 0.7266859 109 6 0.7693325 86 6 0.8661616 70 6 0.7945380 153 9 0.8148148 56 6 0.7726009 111 9 NA 0 0 0.8343661 89 6 0.7704185 50 6 0.7349129 67 5 0.7648852 154 6 0.82200950 184 6 0.7747044 236 9 0.542857 21 2 0.8950956 74 6 0.803800 159 9 0.8602694 54 6 0.813580 47 6 0.7750194 275 9 0.653704 60 5 0.760847 47 6 0.8537202 97 6 0.8340979 228 9 0.8288423 173 9 0.7932809 372 9 0.7085306 112 9 0.7089259 95 6 0.678862 158 9 0.8909091 65 6 0.750000 52 4 0.8010349 224 9 0.8401797 226 6 0.831855 236 9 0.7780382 146 6 0.8565149 187 6 0.852229 229 8 0.7697342 0.7097131 0.6753813 0.7741819 0.77640408 0.753308 0.7492131 0.7768209 0.7736130 0.8232446 0.7781063 0.8366938 0.8134226 NA 0.7909318 0.80259740 0.7254918 0.7675235 0.79773686 0.7551389 0.6559350 0.8524480 0.824262 0.7638581 0.7080759 0.7403962 0.7369919 0.8515679 0.80059360 0.8245438 0.8236115 0.7617969 0.65203435 0.6435839 0.6686080 0.8299335 0.756678 0.7871777 0.7744259 0.8821275 0.8173523 0.8308423 0.813537 4 0.7744664 0.8095831 -0.02466732 6 0.767104 0.799288 -0.0321842 0.9965786 5.5812e-02 insignificant 1 1.0000e+00 insignificant 0.885068 2.3449e-01 insignificant 1 1.000000 insignificant -0.0073178 0.811955 insignificant 1 insignificant 0.7744664 0.7563739 0.02664802 6 0.767104 0.7582700 0.00883412 1.0596e-01 7.9696e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.3525e-01 9.4644e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0208979 5.5830e-01 insignificant 1.0000e+00 insignificant 0.7744664 0.807617 -5.1040e-02 6 0.767104 0.829128 -0.0620243 9.9751e-01 2.9864e-04 weaklyHypometh 1.0000e+00 4.9774e-02 weaklyHypometh 9.8930e-01 1.1722e-02 weaklyHypometh 1.0000e+00 0.78145533 insignificant -0.0544883 1.2983e-02 weaklyHypometh 0.48084759 insignificant 0.809583 0.7563739 0.04934410 9 0.799288 0.7582700 0.0410183 3.0415e-02 9.9518e-01 weaklyHypermeth 4.6083e-01 1.0000e+00 insignificant 1.6940e-01 9.7571e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0282157 5.1998e-01 insignificant 1.0000e+00 insignificant 0.8095831 0.807617 -0.02853032 6 0.7992883 0.829128 -0.0298401 8.4893e-01 1.0496e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.6150e-01 9.8058e-02 insignificant 1.0000e+00 1.0000000 insignificant -0.0471704 1.5544e-01 insignificant 1.0000000 insignificant 0.7563739 0.8076172 -0.0887976 6 0.7582700 0.829128 -0.0708584 9.7551e-01 1.5314e-03 weaklyHypometh 1.0000e+00 3.8285e-02 weaklyHypometh 9.9767e-01 5.6629e-03 weaklyHypometh 1.0000e+00 1.7554e-01 insignificant -0.0753862 6.9020e-02 insignificant 1.0000e+00 insignificant chr5 122115050 122116050 21248 A,ENSG00000197462 0.7823894 152 5 0.7117177 134 4 0.7063853 47 4 0.8125523 165 5 0.8055556 40 2 0.838889 172 5 0.5804233 61 5 0.7629712 78 4 0.7261905 48 4 0.7600000 34 4 0.5417312 156 5 0.7000000 8 0 0.7318182 60 4 0.6952381 38 4 0.8101852 61 3 0.9629630 21 1 0.9956140 154 1 0.7863326 188 5 0.71190476 60 4 0.5712919 119 5 0.541667 26 2 0.6231884 28 1 0.703182 72 2 0.8138889 35 2 0.718454 52 2 0.8116737 134 6 0.358696 28 1 0.441176 20 1 0.6575776 67 4 0.7731868 111 4 0.7187660 112 4 0.7231155 162 5 0.7566948 102 5 0.5347222 48 4 0.789021 94 6 0.7000000 25 2 0.741667 115 4 0.6920093 93 5 0.7094041 131 5 0.798437 111 5 0.8263889 189 5 0.7795699 83 4 0.816834 144 5 0.8211144 0.7551556 0.8681115 0.8903792 0.84702381 0.917222 0.7665714 0.8866851 0.8480952 0.9440000 0.8015125 0.4500000 0.8268182 0.8844762 0.8155556 0.89897928 0.9273334 0.8908532 0.92142857 0.8656364 0.7659525 0.7612785 0.876409 0.9022222 0.8482448 0.8782363 0.7538872 0.7816878 0.87494281 0.8808571 0.9004696 0.9308565 0.85935703 0.7878889 0.8807937 0.8560000 0.856333 0.8969794 0.8776975 0.9300973 0.8457738 0.9133871 0.931486 1 0.8184855 0.8146399 -0.00749655 4 0.700528 0.755524 -0.0549958 0.7742807 4.2100e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.257363 7.9687e-01 lowCoverage 1 1.000000 lowCoverage 0.0926601 0.071039 lowCoverage 1 lowCoverage 0.8184855 0.7631027 0.02248188 4 0.700528 0.7355623 -0.03503415 9.0252e-02 5.8614e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.5705e-02 7.3167e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0473553 3.1136e-01 lowCoverage 1.0000e+00 lowCoverage 0.8184855 0.860182 -3.3676e-02 5 0.700528 0.822042 -0.1215143 9.9421e-01 8.7776e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.2286e-01 1.4833e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0364192 2.8110e-01 lowCoverage 1.00000000 lowCoverage 0.814640 0.7631027 0.02383606 4 0.755524 0.7355623 0.0199616 9.9924e-02 8.5028e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 2.2385e-01 6.3215e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0453048 4.2525e-01 lowCoverage 1.0000e+00 lowCoverage 0.8146399 0.860182 -0.02856120 4 0.7555240 0.822042 -0.0665185 9.8438e-01 1.8529e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.9859e-01 1.2282e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage -0.1290793 1.4045e-02 lowCoverage 0.8778282 lowCoverage 0.7631027 0.8601824 -0.0643495 4 0.7355623 0.822042 -0.0864801 9.9969e-01 1.1801e-02 lowCoverage 1.0000e+00 2.1339e-01 lowCoverage 9.9961e-01 2.4399e-02 lowCoverage 1.0000e+00 5.0831e-01 lowCoverage -0.0837745 8.3040e-02 lowCoverage 1.0000e+00 lowCoverage chr5 123961450 123962450 21293 A,ENSG00000214750 0.8928250 138 5 0.8850816 166 5 0.8154200 85 5 0.8465872 62 2 0.6119048 44 4 0.845183 340 5 0.6413818 56 5 0.8676327 125 5 0.9006410 59 3 0.9345238 58 5 0.8683834 276 6 0.9444444 21 2 0.8892857 88 4 0.8455882 31 2 0.6574413 59 3 0.5090909 26 2 0.9166667 16 2 0.8643956 117 4 0.88478868 133 6 0.6948981 272 5 0.673923 66 4 0.9240789 85 4 0.955152 90 3 0.7720445 129 5 0.883775 48 3 0.8784640 206 5 0.585174 107 4 0.666157 56 4 0.8722868 91 5 0.9385572 206 6 0.8822650 176 5 0.9045566 326 5 0.8362072 151 5 0.8983580 59 4 0.786203 173 6 0.6481481 26 1 0.684524 133 6 0.9306746 178 5 0.8321429 108 3 0.890805 100 3 0.8336626 78 4 0.9529101 72 3 0.885714 90 5 0.9050685 0.8815869 0.7135375 0.8890270 0.76346154 0.847469 0.7155819 0.8440601 0.8892012 0.9733516 0.8708716 0.8812644 0.9118132 0.9252168 0.6563050 0.52592842 0.9143200 0.8948267 0.92545547 0.8953829 0.8741392 0.9057632 0.909790 0.8339901 0.9046297 0.9280378 0.8184557 0.8596227 0.90018784 0.9244696 0.8742899 0.8994023 0.91835631 0.8969370 0.7333458 0.8137990 0.799038 0.9221154 0.9419231 0.8968170 0.8840396 0.9485348 0.924359 2 0.8535912 0.8846154 -0.02968134 5 0.723669 0.751518 -0.0278490 0.9974376 2.1024e-01 insignificant 1 1.0000e+00 insignificant 0.973072 3.3173e-01 insignificant 1 1.000000 insignificant -0.0122279 0.787387 lowCoverage 1 lowCoverage 0.8535912 0.8902778 -0.03257539 5 0.723669 0.7341274 -0.01045864 9.7604e-01 3.2181e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.2243e-01 7.2972e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0184558 7.4001e-01 lowCoverage 1.0000e+00 lowCoverage 0.8539843 0.919643 -5.2058e-02 3 0.844280 0.865876 -0.0215958 9.0912e-01 9.6738e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.6380e-01 7.6349e-02 lowCoverage 1.0000e+00 1.00000000 lowCoverage -0.0632387 9.0884e-02 lowCoverage 1.00000000 lowCoverage 0.884615 0.8902778 -0.00268394 5 0.751518 0.7341274 0.0173904 7.5522e-01 7.8870e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.7568e-01 8.8967e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0306838 6.0991e-01 lowCoverage 1.0000e+00 lowCoverage 0.8857323 0.919643 -0.02449564 3 0.8767707 0.865876 0.0108947 6.5075e-01 1.2642e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.7357e-01 1.6309e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage -0.0510107 2.4194e-01 lowCoverage 1.0000000 lowCoverage 0.8915160 0.9196429 -0.0202793 3 0.8564819 0.865876 -0.0093940 6.4280e-01 6.0613e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.4075e-01 3.5269e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0816945 1.5586e-01 lowCoverage 1.0000e+00 lowCoverage chr5 124271050 124272050 21318 A,ENSG00000214748 0.6944444 88 3 0.6211640 65 6 0.6180556 40 4 0.6902098 109 6 0.7346728 66 6 0.543723 49 3 0.6476190 45 3 0.7571429 78 6 0.5944444 40 3 0.7202381 46 5 0.6511464 127 6 0.4583333 22 2 0.7166667 64 6 0.5972222 37 5 0.7051901 63 6 0.9000000 10 2 1.0000000 4 0 0.6301097 146 8 0.54629630 33 3 0.6727273 42 5 0.588889 22 1 1.0000000 2 0 0.618045 60 5 0.4814815 26 2 0.783529 64 4 0.6555556 49 4 0.925000 29 4 0.750000 13 0 0.5944444 45 3 0.7367965 58 6 0.7532051 68 6 0.7857143 42 6 0.6063340 85 6 0.6431878 60 6 0.603535 84 6 0.4722222 16 0 0.452419 71 6 0.7585317 71 6 0.5584046 70 2 0.690022 118 6 0.6634474 102 6 0.8939394 66 2 0.724777 138 6 0.7716049 0.8111993 0.7608025 0.8335664 0.88015908 0.748325 0.7929894 0.8500000 0.7299383 0.8280423 0.7428438 0.5370370 0.8185185 0.7330247 0.8323749 0.81569851 NA 0.8120384 0.72530864 0.8292929 0.8703704 0.8555837 0.705019 0.4876543 0.8579288 0.6839506 0.8759022 0.9001535 0.81975309 0.8977393 0.8774929 0.7619048 0.71753753 0.7995297 0.5643443 0.6913580 0.646893 0.8134259 0.7853751 0.8309002 0.8322999 0.8390754 0.799169 0 0.7331628 0.7426778 -0.02481090 4 0.606242 0.708041 -0.1017991 0.9319767 5.5859e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.984356 2.5030e-01 lowCoverage 1 1.000000 lowCoverage -0.0477514 0.351602 lowCoverage 1 lowCoverage 0.7337884 0.6201550 0.07671826 6 0.673602 0.7305899 -0.05698783 3.5050e-02 7.8027e-01 weaklyHypermeth 5.0798e-01 1.0000e+00 insignificant 7.6107e-02 8.9197e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0855987 1.4596e-01 lowCoverage 1.0000e+00 lowCoverage 0.7331628 0.761134 -1.6339e-02 6 0.606242 0.698045 -0.0918027 8.7882e-01 7.5897e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.1020e-01 7.7410e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0311477 6.2655e-01 lowCoverage 1.00000000 lowCoverage 0.742138 0.6201550 0.10315015 4 0.675601 0.7305899 -0.0549888 9.2315e-03 9.0471e-01 lowCoverage 1.5916e-01 1.0000e+00 lowCoverage 2.6810e-02 9.8298e-01 lowCoverage 4.8746e-01 1.0000e+00 lowCoverage 0.1333501 5.3591e-02 lowCoverage 1.0000e+00 lowCoverage 0.7421384 0.760649 0.00620875 4 0.6756010 0.664494 0.0111070 7.1007e-01 8.4259e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 4.7988e-01 9.8805e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 0.0166037 8.1517e-01 lowCoverage 1.0000000 lowCoverage 0.6201550 0.7606491 -0.0960983 6 0.7305899 0.664494 0.0660959 9.0653e-01 7.0251e-02 insignificant 1.0000e+00 9.6234e-01 insignificant 8.5162e-01 1.8483e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.1167464 1.3992e-01 lowCoverage 1.0000e+00 lowCoverage chr5 124914150 124915150 21333 A,ENSG00000208973,ENSG00000222107 0.7202487 296 6 0.6786743 91 5 0.5952381 39 5 0.7422608 244 6 0.7375000 56 3 0.570979 65 5 0.6831140 63 3 0.6916667 68 6 0.6317460 41 5 0.8407407 39 6 0.6677489 96 6 0.8060606 38 3 0.7916667 61 3 0.7136905 51 6 0.7962302 60 6 0.4500000 28 3 0.5952381 26 1 0.6792757 303 6 0.82407407 39 5 0.6552579 57 5 0.533333 17 2 0.9333333 7 0 0.668768 187 6 0.7351190 39 4 0.943824 79 2 0.5970482 70 5 0.786713 24 2 0.888889 13 0 0.7386277 113 4 0.7659341 68 5 0.6218407 67 6 0.8852814 56 6 0.7314907 119 6 0.6886574 61 5 0.676389 84 6 0.8000000 7 0 0.766425 74 6 0.6870370 77 6 0.7102559 256 6 0.742188 233 6 0.7739324 211 6 0.7238833 242 6 0.714877 212 6 0.7708353 0.7733170 0.6966732 0.7787257 0.76522140 0.620701 0.7089642 0.7945205 0.7267449 0.8660578 0.7476428 0.8115816 0.8105023 0.8361057 0.8700750 0.53698630 0.8277886 0.7543188 0.92770167 0.7398891 0.6919552 0.9580544 0.759526 0.8551859 0.8736151 0.7316636 0.7509968 0.8538813 0.77117284 0.8717194 0.8004140 0.9508984 0.72402483 0.6742770 0.7496575 0.9141220 0.718662 0.8312024 0.8086024 0.8052226 0.8102065 0.7948653 0.780091 2 0.7306818 0.7716216 -0.02617295 6 0.738012 0.758824 -0.0208122 0.7191888 4.1496e-02 weaklyHypometh 1 1.0000e+00 insignificant 0.981760 1.2399e-01 insignificant 1 1.000000 insignificant -0.0646554 0.166303 lowCoverage 1 lowCoverage 0.7305287 0.6943128 0.03813352 6 0.694347 0.6913893 0.00295789 1.4054e-02 1.7699e-01 weaklyHypermeth 2.2717e-01 1.0000e+00 insignificant 3.7542e-01 2.8951e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0314293 3.0511e-01 lowCoverage 1.0000e+00 lowCoverage 0.7305287 0.778163 -3.7064e-02 6 0.694347 0.730753 -0.0364058 9.7431e-01 1.3463e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.5933e-01 2.0024e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0394567 1.2125e-01 lowCoverage 1.00000000 lowCoverage 0.771003 0.6943128 0.06248708 6 0.718628 0.6913893 0.0272388 9.1544e-03 7.8544e-01 weaklyHypermeth 1.5916e-01 1.0000e+00 insignificant 2.1654e-01 7.0390e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0332260 4.6399e-01 lowCoverage 1.0000e+00 lowCoverage 0.7710027 0.778163 -0.00766137 6 0.7186282 0.730753 -0.0121249 7.5314e-01 4.3110e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.6526e-01 8.8302e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0251986 5.4886e-01 lowCoverage 1.0000000 lowCoverage 0.6943128 0.7781629 -0.0694577 6 0.6913893 0.730753 -0.0393637 7.9677e-01 1.9437e-02 weaklyHypometh 1.0000e+00 3.2395e-01 insignificant 6.5711e-01 2.2368e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0080274 7.4155e-01 lowCoverage 1.0000e+00 lowCoverage chr5 125730750 125731750 21350 A,ENSG00000208973,ENSG00000222107 0.7831062 321 10 0.6917036 180 10 0.6135211 155 10 0.8528653 238 10 0.6457792 90 10 0.805462 333 11 0.7198810 104 10 0.6736619 142 10 0.6587987 109 10 0.7161905 100 10 0.6955173 354 10 0.6060606 64 5 0.8077271 137 10 0.8136364 65 6 0.7675898 143 10 0.7328704 42 5 0.4898148 50 3 0.8514570 264 10 0.84265209 181 10 0.7852553 309 10 0.898590 78 8 0.7760317 126 10 0.682289 214 10 0.7152778 58 4 0.854048 86 10 0.6934958 203 10 0.895510 118 9 0.833736 59 4 0.7396536 142 10 0.8045166 189 10 0.7874376 129 10 0.6944679 391 11 0.6357244 140 10 0.6759996 159 10 0.707269 168 10 0.7436045 86 5 0.600238 79 5 0.7339756 164 10 0.5740871 285 10 0.826326 282 10 0.8086183 310 10 0.8952412 201 10 0.760021 225 10 0.8033217 0.6994803 0.7102942 0.8559869 0.65640590 0.794765 0.7597600 0.7357415 0.7000541 0.7581255 0.7906416 0.5925926 0.7807603 0.8243156 0.7368860 0.72782145 0.5910053 0.8453845 0.86330684 0.8006425 0.9091829 0.7884594 0.745615 0.7886905 0.8856387 0.7177480 0.8733493 0.8465397 0.73959497 0.8135350 0.7997765 0.7513162 0.68949762 0.6654035 0.6946545 0.7690558 0.648252 0.7433686 0.7473435 0.8445423 0.8227113 0.8715004 0.792054 4 0.7673179 0.7830452 -0.01301274 10 0.794158 0.762934 0.0312242 0.9297461 6.8208e-01 insignificant 1 1.0000e+00 insignificant 0.999758 5.4027e-02 insignificant 1 1.000000 insignificant -0.0535769 0.095279 insignificant 1 insignificant 0.7672490 0.6984925 0.06863370 10 0.778324 0.7078630 0.07046091 2.5760e-04 9.9995e-01 weaklyHypermeth 6.4399e-03 1.0000e+00 weaklyHypermeth 8.0990e-03 9.9823e-01 weaklyHypermeth 1.8835e-01 1.0000e+00 insignificant 0.0448756 1.7493e-01 insignificant 1.0000e+00 insignificant 0.7673868 0.816577 -4.5893e-02 10 0.807881 0.698738 0.1091427 9.9971e-01 2.3592e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8910e-01 1.1613e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0451811 4.7124e-01 insignificant 1.00000000 insignificant 0.782924 0.6984925 0.08116168 10 0.744698 0.7078630 0.0368348 8.9824e-05 9.9940e-01 weaklyHypermeth 2.2456e-03 1.0000e+00 weaklyHypermeth 1.3866e-04 9.9999e-01 weaklyHypermeth 6.6030e-03 1.0000e+00 weaklyHypermeth 0.0984525 8.8741e-03 weaklyHypermeth 3.2867e-01 insignificant 0.7830452 0.817204 -0.02819885 10 0.7629336 0.748648 0.0142858 9.9819e-01 2.6737e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.7490e-01 7.7966e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0083958 8.9140e-01 insignificant 1.0000000 insignificant 0.6984925 0.8178324 -0.1139314 10 0.7078630 0.806236 -0.0983732 1.0000e+00 1.0026e-05 weaklyHypometh 1.0000e+00 4.0104e-04 weaklyHypometh 1.0000e+00 3.7063e-04 weaklyHypometh 1.0000e+00 2.6473e-02 weaklyHypometh -0.0900566 1.8233e-01 insignificant 1.0000e+00 insignificant chr5 125810850 125811850 21355 GRAMD3 A,ENSG00000155324 0.7613461 358 10 0.6834930 206 10 0.6169139 116 10 0.7920156 199 10 0.7324603 94 7 0.806376 340 10 0.7168869 135 10 0.7710059 127 9 0.6579813 90 6 0.8854684 97 7 0.8805098 313 10 0.7545455 55 7 0.7394357 126 10 0.8469697 41 5 0.8477175 132 7 0.7386017 68 6 0.6351852 39 2 0.8036612 241 10 0.78200020 123 7 0.8267228 285 10 0.694904 68 4 0.8695554 110 10 0.771961 189 10 0.7998252 65 7 0.869318 75 7 0.7445266 235 10 0.808352 97 7 0.660714 40 3 0.8696340 121 8 0.7373196 207 10 0.6935920 193 10 0.8157079 375 10 0.6489510 133 7 0.6170536 121 10 0.526482 172 10 0.7800000 69 6 0.584921 90 7 0.7796061 200 10 0.7846391 318 10 0.852832 300 10 0.7918531 242 10 0.8984322 252 10 0.816472 318 10 0.8041579 0.7326796 0.6768816 0.8556242 0.78596743 0.828908 0.7309916 0.8207826 0.7567471 0.8995775 0.8933794 0.7282249 0.7919413 0.7966009 0.8442576 0.77084135 0.7476160 0.8179643 0.81877659 0.8494913 0.7976750 0.8546767 0.794194 0.8488123 0.9162422 0.8705919 0.7912187 0.7647783 0.87480741 0.8168139 0.7476266 0.8118917 0.66179767 0.7029208 0.6944365 0.7952586 0.729176 0.7590344 0.8459527 0.8599110 0.8249729 0.9466183 0.855206 3 0.7918367 0.7965051 -0.00771470 10 0.809624 0.733117 0.0765076 0.6699492 5.1216e-01 insignificant 1 1.0000e+00 insignificant 0.878056 3.2091e-02 weaklyHypometh 1 1.000000 insignificant -0.0139860 0.610872 insignificant 1 insignificant 0.7918367 0.6989796 0.08550333 9 0.809624 0.5811401 0.22848395 1.9410e-05 9.9994e-01 weaklyHypermeth 5.7087e-04 1.0000e+00 weaklyHypermeth 1.1386e-03 9.9930e-01 weaklyHypermeth 3.3489e-02 1.0000e+00 weaklyHypermeth 0.1077959 5.2209e-02 insignificant 1.0000e+00 insignificant 0.7915750 0.840559 -4.8362e-02 10 0.771549 0.817877 -0.0463282 9.9976e-01 1.0325e-02 weaklyHypometh 1.0000e+00 6.9808e-01 insignificant 9.9997e-01 2.4512e-03 weaklyHypometh 1.0000e+00 0.30640055 insignificant -0.0648809 3.7814e-02 weaklyHypometh 1.00000000 insignificant 0.796620 0.6980892 0.09299835 9 0.753646 0.5364371 0.2172090 2.6896e-06 9.9999e-01 weaklyHypermeth 8.1504e-05 1.0000e+00 weaklyHypermeth 6.0020e-04 1.0000e+00 weaklyHypermeth 2.2230e-02 1.0000e+00 weaklyHypermeth 0.1217820 3.4698e-02 weaklyHypermeth 8.6745e-01 insignificant 0.7978482 0.840559 -0.03989730 10 0.7797398 0.817877 -0.0381373 9.9437e-01 3.2943e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.3773e-01 1.4307e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0508949 1.1400e-01 insignificant 1.0000000 insignificant 0.7007673 0.8405594 -0.1326690 9 0.6973682 0.817877 -0.1205090 9.9991e-01 3.7632e-07 weaklyHypometh 1.0000e+00 2.3520e-05 weaklyHypometh 9.9980e-01 1.5468e-05 weaklyHypometh 1.0000e+00 2.2098e-03 weaklyHypometh -0.1726769 7.8149e-03 weaklyHypometh 3.2562e-01 insignificant chr5 126043950 126044950 21361 A,ENSG00000213630 0.5982968 165 6 0.4249838 183 7 0.4357694 127 7 0.5859208 153 5 0.5419872 85 7 0.536107 228 5 0.4754464 89 7 0.5014305 184 7 0.4312841 153 7 0.6073129 91 7 0.5444453 249 7 0.4015152 66 2 0.4313895 177 7 0.5198880 56 5 0.4760618 146 7 0.3753009 87 7 0.2946032 105 2 0.6462787 118 5 0.37593082 172 7 0.5071626 184 7 0.467363 69 7 0.5029221 34 3 0.539377 119 7 0.5429862 91 6 0.676263 61 5 0.4938632 259 7 0.371202 141 6 0.608765 68 7 0.5182389 176 7 0.5444085 225 7 0.4657295 247 7 0.5103183 221 7 0.4184415 214 7 0.4220217 146 7 0.349850 186 7 0.3750000 10 0 0.373060 93 7 0.4083275 253 7 0.4825098 93 5 0.575381 121 6 0.5365126 107 5 0.4777778 27 5 0.568571 109 5 0.5836312 0.5141700 0.5002498 0.6069568 0.60435718 0.562417 0.6375291 0.6186462 0.5541687 0.5948718 0.6290104 0.6134382 0.5582393 0.5343284 0.5792112 0.46483516 0.5108741 0.6285972 0.57156553 0.6064181 0.5719688 0.5160521 0.654653 0.5957989 0.6874161 0.5936098 0.5307692 0.5978509 0.60646600 0.6455517 0.5610543 0.6304915 0.60047800 0.5909639 0.5026456 0.5644473 0.568826 0.5878768 0.5981895 0.6378392 0.5610419 0.5855478 0.584915 5 0.4819021 0.5604909 -0.03294384 7 0.474331 0.452745 0.0215852 0.9028830 7.7435e-02 insignificant 1 1.0000e+00 insignificant 0.982226 7.9393e-02 insignificant 1 1.000000 insignificant -0.0345640 0.254742 insignificant 1 insignificant 0.4819021 0.4368071 0.07585172 7 0.474331 0.3515519 0.12277885 6.5667e-04 9.8473e-01 weaklyHypermeth 1.3681e-02 1.0000e+00 weaklyHypermeth 8.6246e-04 9.1088e-01 weaklyHypermeth 2.6952e-02 1.0000e+00 weaklyHypermeth 0.0944390 5.0190e-04 weaklyHypermeth 2.1822e-02 weaklyHypermeth 0.4820349 0.582057 -8.0204e-03 5 0.480868 0.520042 -0.0391742 8.7936e-01 2.1947e-02 weaklyHypometh 1.0000e+00 9.5422e-01 insignificant 4.6222e-01 2.6378e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant -0.0425948 1.6448e-01 insignificant 1.00000000 insignificant 0.560491 0.4368071 0.08955609 7 0.452745 0.3515519 0.1011936 1.2162e-06 9.9992e-01 weaklyHypermeth 4.0540e-05 1.0000e+00 weaklyHypermeth 2.3591e-04 9.9986e-01 weaklyHypermeth 1.0723e-02 1.0000e+00 weaklyHypermeth 0.1290030 9.8664e-05 weaklyHypermeth 5.8038e-03 weaklyHypermeth 0.5614754 0.582057 0.02086938 5 0.5174234 0.520042 -0.0026186 4.3489e-01 1.6488e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.6449e-01 2.4543e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0080309 7.9370e-01 insignificant 1.0000000 insignificant 0.4377778 0.5820569 -0.0155532 5 0.4017736 0.520042 -0.1182684 9.6353e-01 1.6165e-06 weaklyHypometh 1.0000e+00 8.9803e-05 weaklyHypometh 9.5465e-01 6.7767e-03 weaklyHypometh 1.0000e+00 1.9932e-01 insignificant -0.1370338 9.0436e-04 weaklyHypometh 6.4597e-02 weaklyHypometh chr5 131623250 131624250 21471 PDLIM4 A,ENSG00000131435 0.8651180 331 6 0.7050809 264 6 0.5621334 158 6 0.8789072 259 6 0.7474747 80 4 0.886584 393 6 0.8842326 186 6 0.7687447 208 6 0.8655736 152 4 0.8466667 117 4 0.8398268 206 6 0.8562121 74 4 0.8434606 160 4 0.9682540 25 1 0.8570642 119 6 0.8522167 73 4 0.7420635 40 3 0.5480501 411 6 0.75727214 196 6 0.8406526 330 6 0.806669 77 6 0.8106884 64 4 0.790291 182 6 0.7610480 92 6 0.790647 61 5 0.8091656 278 6 0.621183 120 4 0.837037 76 3 0.7892244 230 6 0.7942661 294 6 0.7960335 278 6 0.8852625 315 6 0.3424927 282 6 0.3023107 216 6 0.433333 290 5 0.2500000 41 2 0.298515 164 6 0.4956306 383 6 0.8461073 310 6 0.780137 354 6 0.8124039 291 6 0.7191579 389 6 0.710630 299 6 0.8345262 0.7592381 0.7136945 0.8723203 0.75003130 0.884845 0.8340877 0.8428474 0.8580888 0.8624164 0.8260444 0.7984974 0.8119978 0.8641319 0.8624062 0.80295567 0.8398995 0.5329200 0.81621721 0.8504532 0.7987082 0.8186395 0.824333 0.7961276 0.7081105 0.8129614 0.6859838 0.8861800 0.81099894 0.8127399 0.8354437 0.8490145 0.33919071 0.1863362 0.2507527 0.1880361 0.321698 0.3943998 0.8772569 0.7967693 0.8229098 0.7961867 0.683239 4 0.8093097 0.8319613 -0.02071599 6 0.805705 0.807356 -0.0016508 0.7288251 3.0198e-01 insignificant 1 1.0000e+00 insignificant 0.091875 6.2109e-01 insignificant 1 1.000000 insignificant 0.0148198 0.619557 insignificant 1 insignificant 0.8090957 0.4334545 0.39525261 6 0.690604 0.4547100 0.23589431 9.9206e-29 7.1012e-01 hypermethylated 1.9841e-26 1.0000e+00 hypermethylated 1.8677e-10 6.7697e-01 hypermethylated 3.7353e-08 1.0000e+00 hypermethylated 0.4520657 2.5765e-06 hypermethylated 2.1471e-04 hypermethylated 0.8093097 0.818514 -6.5625e-04 6 0.805705 0.772684 0.0330214 7.1565e-02 3.4418e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.4418e-01 4.3048e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0320922 3.8137e-01 insignificant 1.00000000 insignificant 0.832043 0.4327273 0.40246351 6 0.834876 0.3118528 0.5230236 3.3904e-24 9.3819e-01 hypermethylated 4.8434e-22 1.0000e+00 hypermethylated 3.5349e-08 9.8934e-01 hypermethylated 5.0498e-06 1.0000e+00 hypermethylated 0.4372459 1.2078e-05 hypermethylated 1.0980e-03 hypermethylated 0.8320426 0.818624 0.01475343 6 0.8348764 0.805157 0.0297190 1.0101e-01 7.0223e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.0026e-01 6.1550e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0172724 6.0050e-01 insignificant 1.0000000 insignificant 0.4330422 0.8185140 -0.3729290 6 0.3638283 0.772684 -0.4088553 9.3934e-01 1.7460e-14 hypomethylated 1.0000e+00 4.3649e-12 hypomethylated 9.9723e-01 3.6476e-07 hypomethylated 1.0000e+00 7.2951e-05 hypomethylated -0.4199735 1.1314e-05 hypomethylated 2.2628e-03 hypomethylated chr5 133247050 133248050 21529 A,ENSG00000208898 0.7826421 286 5 0.8836143 195 5 0.8784912 127 5 0.9235450 229 5 0.7561050 66 5 0.935681 257 5 0.7606481 100 5 0.9131037 127 5 0.8577513 110 5 0.6445576 165 5 0.9576102 146 5 0.8654545 53 5 0.9083698 175 5 0.8760504 31 2 0.9369424 156 5 0.9333333 24 2 0.9037524 55 4 0.8890396 289 5 0.94151758 146 5 0.7461159 256 5 0.822344 75 5 0.6436739 133 5 0.767282 211 5 0.7654607 76 5 0.925188 67 4 0.9366651 210 5 0.600545 76 5 0.750665 98 5 0.9355932 140 5 0.9528861 233 5 0.7602374 200 5 0.7748061 263 5 0.6270443 187 5 0.4347059 72 4 0.470238 129 3 0.3654545 37 4 0.616228 95 5 0.6286983 231 5 0.7436742 287 5 0.795642 251 5 0.8737027 249 5 0.9313363 272 5 0.755697 332 5 0.9294182 0.8757625 0.8467819 0.9290303 0.89482694 0.902639 0.9281293 0.9111701 0.8465587 0.8960303 0.9423520 0.9280891 0.8800076 0.8891346 0.9223567 0.93605442 0.8549409 0.8934315 0.93684283 0.8909733 0.9301413 0.8798738 0.903468 0.9748343 0.9017595 0.9273184 0.8381572 0.8909959 0.92928075 0.9576663 0.9259182 0.9173906 0.55876244 0.4530372 0.5446408 0.3816327 0.626591 0.5638621 0.9076565 0.9607335 0.8849639 0.9385174 0.871673 4 0.9104577 0.9118967 -0.00874320 5 0.768201 0.731467 0.0367344 0.7399486 5.0211e-01 insignificant 1 1.0000e+00 insignificant 0.754716 2.9892e-01 insignificant 1 1.000000 insignificant 0.0617706 0.124138 lowCoverage 1 lowCoverage 0.9104577 0.6564581 0.25345624 5 0.768201 0.5712567 0.19694474 1.8153e-25 9.8619e-01 hypermethylated 3.0255e-23 1.0000e+00 hypermethylated 6.1186e-08 9.9531e-01 hypermethylated 6.7984e-06 1.0000e+00 hypermethylated 0.3409881 3.2972e-04 lowCoverage 1.8318e-02 lowCoverage 0.9104577 0.933861 -1.1797e-02 5 0.768201 0.654087 0.1141148 4.8647e-01 2.8591e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.3826e-01 2.6835e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0447059 3.0958e-01 lowCoverage 1.00000000 lowCoverage 0.911897 0.6564581 0.26073596 5 0.731467 0.5712567 0.1602104 6.0188e-18 8.6905e-02 hypermethylated 6.0188e-16 1.0000e+00 hypermethylated 3.8449e-07 8.5696e-01 hypermethylated 3.8449e-05 1.0000e+00 hypermethylated 0.2792175 6.4385e-04 lowCoverage 2.7994e-02 lowCoverage 0.9118967 0.933861 -0.00291094 5 0.7314671 0.654087 0.0773804 3.9463e-01 3.7726e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.1177e-01 5.7931e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0170647 7.3474e-01 lowCoverage 1.0000000 lowCoverage 0.6564581 0.9338605 -0.2636207 5 0.5712567 0.654087 -0.0828299 1.0000e+00 8.4421e-09 hypomethylated 1.0000e+00 6.4939e-07 hypomethylated 9.9891e-01 4.6993e-05 hypomethylated 1.0000e+00 4.6993e-03 hypomethylated -0.2962823 7.7802e-04 lowCoverage 6.4597e-02 lowCoverage chr5 133267550 133268550 21531 A,ENSG00000208898 0.8663996 413 8 0.7425730 171 8 0.8434607 199 8 0.8656960 205 8 0.7889474 120 9 0.757838 238 5 0.7900531 171 8 0.8516573 150 8 0.7073082 162 8 0.8935677 163 8 0.8732882 254 8 0.7373820 95 6 0.7808158 201 8 0.7272727 31 3 0.9119289 179 8 0.8939394 62 6 0.7961236 136 8 0.8911776 225 8 0.88334185 150 6 0.8602841 151 5 0.851047 102 6 0.9117424 75 6 0.799943 321 9 0.8465909 58 6 0.893607 120 6 0.8487911 181 6 0.865656 156 6 0.746152 102 6 0.8236932 172 8 0.7830561 264 6 0.6910461 229 6 0.8885246 320 6 0.6604466 198 8 0.3414650 139 6 0.649371 103 6 0.7686934 99 6 0.579602 137 8 0.7736570 244 8 0.9337357 307 8 0.896515 306 8 0.8907977 239 8 0.8902761 375 8 0.883746 328 8 0.8859844 0.8688876 0.8824135 0.9022473 0.88878156 0.828091 0.8737000 0.8969889 0.8368910 0.8961622 0.9017851 0.8710425 0.8886188 0.9120314 0.9382886 0.95244351 0.8232073 0.9210131 0.90606014 0.8983015 0.9048128 0.8725521 0.924086 0.8149764 0.8868648 0.9050866 0.8979240 0.8457716 0.90088765 0.9133351 0.8978752 0.9018084 0.68840644 0.3266084 0.7848689 0.7387038 0.611232 0.8337154 0.9158604 0.8935062 0.9163120 0.9154092 0.915426 6 0.8875144 0.8990476 -0.00675793 6 0.785311 0.766555 0.0187558 0.8720720 3.4629e-01 insignificant 1 1.0000e+00 insignificant 0.840872 2.6040e-01 insignificant 1 1.000000 insignificant -0.0060013 0.802000 insignificant 1 insignificant 0.8875144 0.6945652 0.19830375 6 0.785311 0.6628621 0.12244843 2.6463e-15 9.9184e-01 weaklyHypermeth 1.8902e-13 1.0000e+00 weaklyHypermeth 4.3863e-08 9.9968e-01 weaklyHypermeth 5.4829e-06 1.0000e+00 weaklyHypermeth 0.1942803 2.9628e-02 weaklyHypermeth 8.0076e-01 insignificant 0.8918763 0.909968 -1.7131e-02 8 0.872567 0.904695 -0.0321275 9.2081e-01 2.6676e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 8.9395e-01 2.6460e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant -0.0758613 2.1196e-04 weaklyHypometh 0.03027969 weaklyHypometh 0.899048 0.6945652 0.20654868 6 0.766555 0.6628621 0.1036926 2.9299e-10 9.9899e-01 hypermethylated 1.5421e-08 1.0000e+00 hypermethylated 3.3383e-08 9.9997e-01 hypermethylated 5.0498e-06 1.0000e+00 hypermethylated 0.2002815 2.6140e-02 weaklyHypermeth 7.4550e-01 insignificant 0.9058598 0.909968 -0.00808381 6 0.8393818 0.904695 -0.0653129 8.1158e-01 2.3555e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.0885e-01 3.2569e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0698600 4.3105e-03 weaklyHypometh 0.4310500 insignificant 0.6965066 0.9099678 -0.2166557 6 0.7087357 0.904695 -0.1959591 1.0000e+00 1.2606e-06 hypomethylated 1.0000e+00 7.4155e-05 hypomethylated 1.0000e+00 6.8059e-08 hypomethylated 1.0000e+00 1.7015e-05 hypomethylated -0.2701415 8.5359e-03 weaklyHypometh 3.3192e-01 insignificant chr5 133829350 133830350 21553 A,ENSG00000145835 0.0097859 690 24 0.0134819 1008 26 0.0081229 1084 26 0.0026237 834 18 0.0057515 902 26 0.072981 1137 24 0.0100539 1370 26 0.0059126 925 26 0.0062845 1258 26 0.0074157 1136 26 0.0181101 1008 26 0.0046715 1407 26 0.0103301 1316 26 0.0128019 368 18 0.0296210 1146 26 0.0086281 1033 26 0.0138102 938 25 0.0042034 931 23 0.00091575 577 26 0.0348081 949 23 0.053367 377 25 0.0054501 642 18 0.019447 607 26 0.0238421 396 27 0.011334 507 18 0.0102182 1086 26 0.020438 593 26 0.020665 547 25 0.0075279 702 26 0.0095306 1255 26 0.0093954 1265 26 0.0055394 1195 24 0.0271516 846 26 0.0051815 756 26 0.026663 989 21 0.0204470 409 21 0.028146 309 25 0.0027854 781 26 0.0268579 1042 23 0.039830 811 26 0.0131764 769 18 0.0499510 709 18 0.054256 1069 22 0.0121753 0.0167237 0.0107136 0.0029110 0.00046613 0.023403 0.0092359 0.0049680 0.0065670 0.0119278 0.0211709 0.0066498 0.0089992 0.0144263 0.0062900 0.00355949 0.0166605 0.0052338 0.00015302 0.0242116 0.0239656 0.0064717 0.016878 0.0215877 0.0107404 0.0115586 0.0216121 0.0145405 0.00091503 0.0094313 0.0104685 0.0071928 0.00838119 0.0022208 0.0317775 0.0150096 0.027368 0.0018478 0.0308786 0.0329336 0.0159689 0.0148638 0.026402 18 0.0102913 0.0118840 -0.00093698 26 0.017219 0.021394 -0.0041744 0.4600188 2.1276e-01 insignificant 1 1.0000e+00 insignificant 0.513992 4.5640e-01 insignificant 1 1.000000 insignificant -0.0023805 0.655735 insignificant 1 insignificant 0.0102913 0.0095355 0.00035335 26 0.017219 0.0176239 -0.00040473 2.9381e-01 9.4921e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.6910e-01 9.8673e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0043800 4.7531e-01 insignificant 1.0000e+00 insignificant 0.0102005 0.026364 -1.6714e-02 22 0.011514 0.039589 -0.0280757 9.9944e-01 7.0910e-14 weaklyHypometh 1.0000e+00 7.0910e-11 weaklyHypometh 9.9656e-01 4.9155e-07 weaklyHypometh 1.0000e+00 0.00049155 weaklyHypometh -0.0227984 3.4806e-02 weaklyHypometh 0.96684706 insignificant 0.011884 0.0095355 0.00149307 26 0.021394 0.0176239 0.0037697 2.6136e-01 9.8741e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.6307e-01 9.9679e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0019995 7.4760e-01 insignificant 1.0000e+00 insignificant 0.0116940 0.026364 -0.01619301 22 0.0126733 0.039589 -0.0269162 9.9935e-01 1.8708e-09 weaklyHypometh 1.0000e+00 1.8708e-06 weaklyHypometh 9.9945e-01 5.3137e-05 weaklyHypometh 1.0000e+00 0.0265687 weaklyHypometh -0.0204179 5.1565e-02 insignificant 1.0000000 insignificant 0.0093137 0.0263636 -0.0164999 22 0.0100421 0.039589 -0.0295474 9.9999e-01 3.4667e-06 weaklyHypometh 1.0000e+00 1.6675e-04 weaklyHypometh 9.9999e-01 2.3376e-04 weaklyHypometh 1.0000e+00 1.7982e-02 weaklyHypometh -0.0184184 7.8145e-02 insignificant 1.0000e+00 insignificant chr5 133829650 133830650 21554 A,ENSG00000145835 0.0168169 341 12 0.0143888 363 12 0.0136797 423 12 0.0054659 410 8 0.0000000 295 12 0.015482 504 12 0.0179793 445 12 0.0115175 353 12 0.0153071 360 12 0.0096251 402 12 0.0329705 435 12 0.0075493 431 12 0.0098224 431 12 0.0163043 163 8 0.0096869 459 12 0.0064935 287 12 0.0258187 255 11 0.0063991 354 8 0.00000000 264 12 0.0178276 396 12 0.101382 183 12 0.0122627 315 8 0.036612 311 12 0.0085417 186 11 0.012820 216 8 0.0025687 539 12 0.016484 313 12 0.013881 248 12 0.0051282 330 12 0.0113568 497 12 0.0087358 556 12 0.0349959 533 12 0.0077182 301 12 0.0162289 322 12 0.056780 132 7 0.0106227 139 8 0.049866 146 11 0.0030864 305 12 0.0416915 432 11 0.037737 322 11 0.1085707 316 8 0.0295217 256 9 0.103396 320 8 0.0251563 0.0196064 0.0149542 0.0073101 0.00000000 0.023087 0.0225922 0.0127205 0.0090745 0.0158505 0.0394543 0.0041918 0.0145443 0.0180803 0.0077196 0.00071094 0.0254867 0.0104827 0.00000000 0.0243198 0.0312525 0.0163369 0.021033 0.0134390 0.0133665 0.0039143 0.0285269 0.0214681 0.00054201 0.0085176 0.0130445 0.0122629 0.00832968 0.0057003 0.0754708 0.0178862 0.029781 0.0039747 0.0560653 0.0382982 0.0324091 0.0242740 0.037553 8 0.0149233 0.0165602 -0.00147616 12 0.013413 0.030964 -0.0175517 0.5616097 3.1834e-01 insignificant 1 1.0000e+00 insignificant 0.767184 6.5560e-01 insignificant 1 1.000000 insignificant -0.0094072 0.263742 insignificant 1 insignificant 0.0149233 0.0156134 -0.00091720 12 0.013413 0.0152469 -0.00183436 7.1968e-01 2.6665e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.9202e-01 7.3728e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0113935 2.8641e-01 insignificant 1.0000e+00 insignificant 0.0149274 0.041920 -2.4006e-02 11 0.014530 0.044096 -0.0295660 9.7671e-01 6.5256e-08 weaklyHypometh 1.0000e+00 2.1752e-05 weaklyHypometh 9.7844e-01 8.2364e-04 weaklyHypometh 1.0000e+00 0.13727412 insignificant -0.0515267 3.9648e-02 weaklyHypometh 1.00000000 insignificant 0.016560 0.0156134 0.00104748 12 0.030964 0.0152469 0.0157173 3.6168e-01 6.9940e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.6088e-01 9.0640e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0019863 8.7427e-01 insignificant 1.0000e+00 insignificant 0.0163430 0.041920 -0.02444276 11 0.0168779 0.044096 -0.0272184 9.9778e-01 1.2357e-05 weaklyHypometh 1.0000e+00 2.4715e-03 weaklyHypometh 9.9505e-01 2.7921e-03 weaklyHypometh 1.0000e+00 0.5584176 insignificant -0.0421195 6.9354e-02 insignificant 1.0000000 insignificant 0.0156250 0.0419198 -0.0226723 11 0.0165175 0.044096 -0.0275788 9.6928e-01 6.1665e-04 weaklyHypometh 1.0000e+00 1.7129e-02 weaklyHypometh 9.8997e-01 1.2736e-02 weaklyHypometh 1.0000e+00 3.0324e-01 insignificant -0.0401332 8.4458e-02 insignificant 1.0000e+00 insignificant chr5 133916650 133917650 21560 PHF15 A,ENSG00000043143 0.6975719 304 8 0.6949574 171 8 0.7693452 56 6 0.8247079 335 8 0.6283045 69 7 0.817102 270 8 0.7458791 56 3 0.8386415 155 8 0.6564251 75 8 0.7278305 53 6 0.7189901 248 8 0.6236111 41 4 0.7851426 176 8 0.6276689 101 8 0.8541982 78 8 0.5833333 23 1 0.6666667 7 0 0.6177346 418 7 0.87809524 130 8 0.6785413 191 8 0.872222 58 6 0.8892045 59 3 0.657075 124 8 0.5875661 48 6 0.881013 144 6 0.6128750 147 8 0.816987 54 6 0.758025 45 5 0.6343070 162 6 0.8303211 158 8 0.7690399 189 8 0.7776783 189 8 0.7395537 157 8 0.6765783 78 8 0.527217 134 6 0.6071429 29 3 0.571050 171 8 0.6980351 147 8 0.6564294 187 8 0.800886 242 8 0.8286403 287 8 0.8239660 177 6 0.685959 209 8 0.7782176 0.7553184 0.8224437 0.8209478 0.66044890 0.821329 0.7322180 0.8765353 0.6615367 0.7965298 0.8161769 0.6478036 0.7996385 0.6793728 0.8774058 0.72503393 0.7938805 0.7733362 0.86317214 0.7269036 0.8767442 0.8662791 0.775523 0.6580103 0.8835524 0.7414350 0.8364937 0.8552972 0.79110418 0.8366072 0.8427572 0.7914036 0.71277819 0.7508065 0.5478457 0.6334441 0.622749 0.7570774 0.8272408 0.8315693 0.8441108 0.8587105 0.726029 1 0.8109116 0.8373275 -0.02069212 8 0.647924 0.645594 0.0023301 0.9873817 4.4419e-01 insignificant 1 1.0000e+00 insignificant 0.996162 1.7738e-01 insignificant 1 1.000000 insignificant -0.0354554 0.351564 insignificant 1 insignificant 0.8110583 0.6648045 0.13373275 8 0.646362 0.6665134 -0.02015178 8.2486e-09 9.7894e-01 weaklyHypermeth 3.0550e-07 1.0000e+00 weaklyHypermeth 2.2839e-02 9.3535e-01 weaklyHypermeth 4.3093e-01 1.0000e+00 insignificant 0.0851412 5.5629e-02 insignificant 1.0000e+00 insignificant 0.8131793 0.833938 -1.0546e-02 8 0.741485 0.655506 0.0859791 7.5392e-01 6.8807e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.0149e-01 6.3513e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0374388 3.9955e-01 insignificant 1.00000000 insignificant 0.837582 0.6648045 0.16820752 8 0.636893 0.6665134 -0.0296205 6.6576e-07 9.9910e-01 weaklyHypermeth 2.5606e-05 1.0000e+00 weaklyHypermeth 5.6050e-03 9.2225e-01 weaklyHypermeth 1.4907e-01 1.0000e+00 insignificant 0.1205966 2.0304e-02 weaklyHypermeth 6.1527e-01 insignificant 0.8411420 0.833787 0.02883799 8 0.7392716 0.621057 0.1182146 4.3775e-01 8.3547e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.2278e-01 8.9201e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0019834 9.6796e-01 insignificant 1.0000000 insignificant 0.6638655 0.8337875 -0.1413234 8 0.5998161 0.621057 -0.0212409 9.9997e-01 1.9329e-03 weaklyHypometh 1.0000e+00 4.6022e-02 weaklyHypometh 9.9458e-01 4.9381e-02 weaklyHypometh 1.0000e+00 9.3173e-01 insignificant -0.1225800 3.5887e-02 weaklyHypometh 8.1826e-01 insignificant chr5 134415650 134416650 21566 PITX1 A,ENSG00000069011 0.8150492 155 5 0.7950000 83 5 0.6662362 119 5 0.8426471 51 5 1.0000000 50 5 0.777404 105 5 0.6479365 51 5 0.8155989 108 5 0.8314286 70 5 0.8082271 76 5 0.8378285 164 5 0.8535714 41 5 0.7993559 110 5 NA 0 0 0.7741004 102 5 0.9818182 34 3 0.7200000 31 3 0.7076611 91 5 0.90428571 90 5 0.6977188 127 5 0.873523 96 5 0.8800000 15 1 0.899363 153 5 0.8401338 69 5 0.900000 18 1 0.7765134 110 5 0.901275 55 3 0.806030 83 5 0.8383957 57 5 0.7587259 134 5 0.8701905 80 5 0.8565966 214 5 0.3823455 124 5 0.2814136 148 5 NA 0 0 0.4100000 28 3 0.505128 61 5 0.5535238 82 5 0.8598182 154 5 0.815195 184 5 0.7753497 72 5 0.6163787 131 5 0.799301 53 5 0.8038865 0.7644531 0.6351971 0.8080767 1.00000000 0.750192 0.6266121 0.8291658 0.8048735 0.7910966 0.8045060 0.8277065 0.7575904 NA 0.7631858 0.96732955 0.7515625 0.7031370 0.89990699 0.6705968 0.8344402 0.7843750 0.889838 0.8431490 0.8203125 0.7453294 0.8632276 0.7597489 0.83660595 0.7403947 0.8561272 0.8343838 0.35640863 0.3102303 NA 0.3398438 0.479928 0.4901116 0.8499219 0.7894070 0.7462986 0.6040876 0.761309 2 0.7864897 0.8210332 -0.03540809 5 0.801820 0.839376 -0.0375561 0.9910459 3.6871e-02 weaklyHypometh 1 1.0000e+00 insignificant 0.985972 3.2682e-02 weaklyHypometh 1 1.000000 insignificant -0.0460691 0.082983 lowCoverage 1 lowCoverage 0.7864897 0.3747178 0.40986610 5 0.801820 0.3968160 0.40500362 2.6817e-23 1.0000e+00 hypermethylated 3.3521e-21 1.0000e+00 hypermethylated 1.5857e-09 1.0000e+00 hypermethylated 2.6429e-07 1.0000e+00 hypermethylated 0.3775108 4.3973e-04 lowCoverage 2.1822e-02 lowCoverage 0.7864897 0.752525 2.5992e-02 5 0.801820 0.778293 0.0235265 3.3948e-01 8.7916e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.7972e-01 9.1314e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0307845 5.3396e-01 lowCoverage 1.00000000 lowCoverage 0.821033 0.3747178 0.44497899 5 0.839376 0.3968160 0.4425597 4.5504e-26 1.0000e+00 hypermethylated 7.5840e-24 1.0000e+00 hypermethylated 4.7713e-09 1.0000e+00 hypermethylated 9.5426e-07 1.0000e+00 hypermethylated 0.4235799 4.9989e-04 lowCoverage 2.2722e-02 lowCoverage 0.8210332 0.752525 0.06236295 5 0.8393757 0.778293 0.0610826 1.8523e-02 9.9787e-01 weaklyHypermeth 8.4196e-01 1.0000e+00 insignificant 2.9076e-02 9.9438e-01 weaklyHypermeth 1.0000e+00 1.0000000 insignificant 0.0768536 1.4075e-01 lowCoverage 1.0000000 lowCoverage 0.3747178 0.7525253 -0.3841794 5 0.3968160 0.778293 -0.3814772 1.0000e+00 3.8360e-11 hypomethylated 1.0000e+00 4.7950e-09 hypomethylated 9.9999e-01 1.8892e-05 hypomethylated 1.0000e+00 2.3615e-03 hypomethylated -0.3467263 6.2849e-04 lowCoverage 5.7135e-02 lowCoverage chr5 134479950 134480950 21570 PITX1 A,ENSG00000069011 0.8614011 201 9 0.7532977 89 5 0.6605186 107 9 0.8877666 129 9 0.7866911 78 8 0.761220 186 9 0.6644565 82 4 0.6760526 131 8 0.7093034 102 8 0.6578283 65 4 0.7246908 243 9 0.5764197 77 5 0.8454874 81 4 0.8461538 13 1 0.7695157 109 8 0.6978395 69 9 0.7358025 78 5 0.8190398 212 9 0.87349687 126 9 0.7492307 248 9 0.795062 33 2 0.8353175 69 7 0.825025 141 9 0.8690476 38 3 0.975000 42 3 0.7223422 167 9 0.698465 59 3 0.662338 38 3 0.7110229 69 4 0.7370157 139 5 0.8278696 140 9 0.8152280 294 9 0.6852974 73 5 0.6226872 84 9 0.761683 158 9 0.8000000 53 4 0.750000 53 4 0.7561665 184 9 0.8306268 202 5 0.814741 220 9 0.7648057 169 9 0.7930025 165 5 0.787755 179 9 0.8931230 0.8029105 0.7382779 0.9384207 0.91106342 0.846207 0.8014191 0.8339190 0.7238633 0.8544560 0.8758964 0.7430114 0.9192503 NA 0.8399973 0.81909722 0.8550926 0.8333734 0.90561869 0.8963837 0.8731481 0.8688616 0.863249 0.8545968 0.9552083 0.8261880 0.7353893 0.8322443 0.83468915 0.7897803 0.8515599 0.8681036 0.70852273 0.7023449 0.8134659 0.7759791 0.818359 0.8090083 0.8832751 0.8826330 0.8216356 0.8756595 0.903393 3 0.8149217 0.8242474 0.00534853 8 0.693217 0.834496 -0.1412787 0.3739419 2.8681e-01 insignificant 1 1.0000e+00 insignificant 0.766387 1.4669e-01 insignificant 1 1.000000 insignificant -0.0366671 0.257299 insignificant 1 insignificant 0.8174274 0.7702479 0.05828417 7 0.783020 0.7257855 0.05723442 5.9041e-04 9.9091e-01 weaklyHypermeth 1.2562e-02 1.0000e+00 weaklyHypermeth 4.1996e-04 9.8186e-01 weaklyHypermeth 1.6478e-02 1.0000e+00 weaklyHypermeth 0.0235051 4.8186e-01 insignificant 1.0000e+00 insignificant 0.8161491 0.841711 -3.7448e-02 9 0.724718 0.742270 -0.0175517 9.4933e-01 9.3053e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7404e-01 1.3442e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0453756 5.1962e-02 insignificant 1.00000000 insignificant 0.823817 0.7702479 0.05242673 7 0.779328 0.7257855 0.0535425 1.1203e-03 9.6308e-01 weaklyHypermeth 2.3433e-02 1.0000e+00 weaklyHypermeth 6.3425e-03 9.9873e-01 weaklyHypermeth 1.6122e-01 1.0000e+00 insignificant 0.0601721 1.2103e-01 insignificant 1.0000e+00 insignificant 0.8239609 0.841711 -0.04060935 8 0.8013952 0.742270 0.0591256 9.8259e-01 7.7678e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 8.9691e-01 4.7548e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0087085 7.5762e-01 insignificant 1.0000000 insignificant 0.7702479 0.8426124 -0.0934738 7 0.7257855 0.824744 -0.0989585 9.9942e-01 1.7227e-04 weaklyHypometh 1.0000e+00 5.9812e-03 weaklyHypometh 9.9953e-01 6.6892e-04 weaklyHypometh 1.0000e+00 3.9348e-02 weaklyHypometh -0.0688806 4.7503e-02 weaklyHypometh 1.0000e+00 insignificant chr5 134610450 134611450 21582 PITX1 A,ENSG00000069011 0.7597811 538 12 0.4298744 369 12 0.4391017 338 12 0.7100912 406 12 0.6273100 202 12 0.782886 734 12 0.5785155 255 9 0.4464123 292 12 0.5216597 288 9 0.6357670 208 9 0.7114623 381 12 0.6030612 204 9 0.3540915 395 12 0.7320707 76 10 0.6612854 270 12 0.6322381 146 9 0.5730144 104 7 0.4290185 607 12 0.48660245 399 12 0.6967643 586 12 0.742116 91 8 0.5659632 157 7 0.756319 238 9 0.7707995 102 8 0.620201 127 7 0.6161625 382 12 0.494576 238 8 0.693384 142 8 0.5516571 302 12 0.5232864 451 12 0.5899609 447 12 0.7860123 698 12 0.4040313 314 12 0.4674226 255 12 0.502857 178 4 0.1428571 69 6 0.326963 285 12 0.1931895 627 12 0.5850237 626 12 0.544431 550 12 0.6780969 402 12 0.5933033 570 12 0.487038 459 12 0.7704301 0.4925553 0.5119682 0.7654874 0.71484777 0.820668 0.6212974 0.4818338 0.5059858 0.6608138 0.7050038 0.6166322 0.3056103 0.6741639 0.6507430 0.60283847 0.6307221 0.3905662 0.48425112 0.7031338 0.7509493 0.4370508 0.773349 0.6718816 0.6554911 0.5656635 0.5365982 0.7718243 0.61350280 0.5738439 0.5736337 0.7729296 0.37797591 0.3763286 0.1664012 0.1052292 0.322588 0.1257105 0.5343589 0.4757200 0.6795940 0.5613659 0.495711 8 0.6000294 0.6297065 -0.02959048 12 0.572235 0.601759 -0.0295235 0.9936626 9.3043e-02 insignificant 1 1.0000e+00 insignificant 0.999124 2.9476e-02 weaklyHypometh 1 1.000000 insignificant -0.0519861 0.215890 insignificant 1 insignificant 0.6000294 0.2853009 0.31188815 12 0.572235 0.3247814 0.24745379 4.0406e-29 1.0000e+00 hypermethylated 1.0101e-26 1.0000e+00 hypermethylated 1.2153e-10 9.4303e-01 hypermethylated 3.0382e-08 1.0000e+00 hypermethylated 0.2509969 6.1420e-03 weaklyHypermeth 2.3623e-01 insignificant 0.6000294 0.555428 4.5409e-02 12 0.572235 0.580565 -0.0083296 2.4463e-01 9.1717e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.8193e-01 5.5236e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0129718 7.6425e-01 insignificant 1.00000000 insignificant 0.629706 0.2853009 0.35429974 12 0.601759 0.3247814 0.2769773 8.3104e-32 1.0000e+00 hypermethylated 2.7701e-29 1.0000e+00 hypermethylated 1.1502e-09 9.9632e-01 hypermethylated 2.8756e-07 1.0000e+00 hypermethylated 0.3029830 2.2081e-03 weaklyHypermeth 9.2002e-02 weaklyHypermeth 0.6297065 0.555428 0.07609907 12 0.6017586 0.580565 0.0211939 2.2882e-03 9.9163e-01 weaklyHypermeth 1.4301e-01 1.0000e+00 insignificant 3.7134e-03 9.7777e-01 weaklyHypermeth 3.3758e-01 1.0000000 insignificant 0.0649579 1.6078e-01 insignificant 1.0000000 insignificant 0.2853009 0.5554277 -0.2639568 12 0.3247814 0.580565 -0.2557834 1.0000e+00 5.8607e-20 hypomethylated 1.0000e+00 2.9304e-17 hypomethylated 9.9988e-01 8.8745e-06 hypomethylated 1.0000e+00 1.4791e-03 hypomethylated -0.2380252 8.8118e-03 weaklyHypometh 3.3192e-01 insignificant chr5 134844450 134845450 21595 A,ENSG00000214707 0.7717033 120 6 0.7501018 113 6 0.8467813 48 6 0.8444444 76 4 0.7353801 52 3 0.828451 73 6 0.8222222 50 3 0.7469336 76 6 0.8162177 52 3 0.8951419 54 6 0.7593155 128 6 0.7023810 34 3 0.8574672 101 6 0.8715278 56 3 0.8623145 64 6 0.8657407 31 2 NA 0 0 0.7021194 172 8 0.88734568 71 6 0.8148148 68 6 0.721230 42 5 0.8888889 12 0 0.916667 49 3 0.7062500 32 1 0.763384 83 4 0.7284493 72 6 0.706944 40 4 0.880000 15 2 0.8781145 67 6 0.8668430 62 6 0.6622239 60 6 0.7907407 66 6 0.8311111 86 6 0.8254377 85 5 0.724747 83 6 0.6666667 6 0 0.805024 72 6 0.7935730 61 6 0.9093210 84 6 0.865513 93 6 0.8763764 108 6 0.7516994 73 2 0.817857 81 5 0.7815900 0.7332565 0.7840976 0.8724280 0.75178687 0.783315 0.8373114 0.7571410 0.6945380 0.8477901 0.7957327 0.7432393 0.7651157 0.8641975 0.8559664 0.80315501 NA 0.7485999 0.86934156 0.7909465 0.7845385 0.9176955 0.931327 0.8259259 0.8086420 0.8017365 0.7481481 0.7892054 0.82587604 0.8594944 0.7831785 0.8358025 0.79379189 0.7590460 0.7177329 0.6795735 0.719003 0.7957718 0.8413032 0.8412726 0.8551885 0.7259369 0.851190 2 0.7915219 0.7833333 0.00751967 6 0.823217 0.723069 0.1001483 0.1663736 4.3165e-01 insignificant 1 1.0000e+00 insignificant 0.615896 5.1251e-01 insignificant 1 1.000000 insignificant 0.0170170 0.568934 lowCoverage 1 lowCoverage 0.7915219 0.7557252 0.03664042 6 0.823217 0.8520188 -0.02880155 2.6386e-01 7.5373e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.5064e-01 9.7717e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0350683 2.7760e-01 lowCoverage 1.0000e+00 lowCoverage 0.7907303 0.849658 -5.5104e-02 6 0.808734 0.898709 -0.0899748 9.9979e-01 2.7208e-03 weaklyHypometh 1.0000e+00 2.9174e-01 insignificant 9.6846e-01 7.2516e-02 insignificant 1.0000e+00 1.00000000 insignificant -0.0346584 3.0155e-01 lowCoverage 1.00000000 lowCoverage 0.783333 0.7557252 0.03201876 6 0.723069 0.8520188 -0.1289498 3.1773e-01 8.2156e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.1635e-01 9.7371e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0180513 6.3311e-01 lowCoverage 1.0000e+00 lowCoverage 0.7861953 0.849658 -0.06165164 6 0.7974252 0.898709 -0.1012836 9.9548e-01 3.6388e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.4286e-01 4.0405e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0516754 1.9577e-01 lowCoverage 1.0000000 lowCoverage 0.7538462 0.8496583 -0.0985817 6 0.8026917 0.898709 -0.0960172 1.0000e+00 1.3407e-02 weaklyHypometh 1.0000e+00 2.3521e-01 insignificant 1.0000e+00 7.3141e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0697267 1.0155e-01 lowCoverage 1.0000e+00 lowCoverage chr5 134855050 134856050 21596 A,ENSG00000214707 0.0441680 602 15 0.0451184 1005 19 0.0428576 1086 19 0.0543845 474 15 0.1182566 661 16 0.076999 1034 20 0.0075501 927 15 0.0062495 692 15 0.0625518 844 16 0.0039596 858 16 0.0683998 738 16 0.0011534 583 16 0.0036775 547 15 0.0129581 602 15 0.0338577 880 15 0.0594560 773 16 0.0045455 73 5 0.1321238 519 15 0.03093919 907 15 0.0136547 1074 15 0.044113 439 19 0.0381525 413 15 0.066296 572 19 0.0940326 272 15 0.020206 315 15 0.0286610 1133 19 0.063177 865 15 0.078080 385 17 0.0210865 802 15 0.0409736 1317 19 0.0449611 1231 19 0.0239596 912 15 0.5812193 360 19 0.8384629 542 15 0.670477 468 12 0.8129149 90 6 0.546094 196 12 0.7357078 850 19 0.0996851 879 15 0.157201 643 19 0.0032866 409 15 0.0288138 494 15 0.148958 548 15 0.0107041 0.0360544 0.0282379 0.0106466 0.00275985 0.024066 0.0152093 0.0083239 0.0072409 0.0083185 0.0173542 0.0015097 0.0039844 0.0126203 0.0096888 0.00063308 0.0102596 0.0559438 0.01442569 0.0182399 0.0212663 0.0100765 0.013714 0.0394560 0.0213603 0.0156518 0.0193993 0.0063217 0.00871553 0.0194995 0.0197440 0.0143097 0.52172829 0.8261859 0.6307279 0.7978426 0.601248 0.7322265 0.0384569 0.0497320 0.0042410 0.0136580 0.130008 15 0.0171382 0.0225303 -0.00237993 15 0.097614 0.071328 0.0262862 0.5623735 7.8062e-01 insignificant 1 1.0000e+00 insignificant 0.835608 8.9802e-01 insignificant 1 1.000000 insignificant -0.0058318 0.595434 insignificant 1 insignificant 0.0170084 0.7700599 -0.75382313 15 0.065424 0.7010296 -0.63560599 1.0000e+00 3.9057e-225 hypomethylated 1.0000e+00 3.9057e-222 hypomethylated 1.0000e+00 1.6110e-42 hypomethylated 1.0000e+00 1.6110e-39 hypomethylated -0.6563363 2.9284e-05 hypomethylated 2.0917e-03 hypomethylated 0.0170733 0.050790 -3.2899e-02 15 0.082138 0.119661 -0.0375229 1.0000e+00 1.1850e-10 weaklyHypometh 1.0000e+00 5.9251e-08 weaklyHypometh 1.0000e+00 1.0036e-05 weaklyHypometh 1.0000e+00 0.00501817 weaklyHypometh -0.0464460 2.1362e-01 insignificant 1.00000000 insignificant 0.022556 0.7697526 -0.74946493 16 0.074072 0.6740669 -0.5999953 1.0000e+00 3.2635e-146 hypomethylated 1.0000e+00 3.2635e-143 hypomethylated 1.0000e+00 1.5883e-32 hypomethylated 1.0000e+00 1.5883e-29 hypomethylated -0.6505044 3.4405e-05 hypomethylated 2.2937e-03 hypomethylated 0.0225434 0.050790 -0.03045604 15 0.0740716 0.119661 -0.0455894 9.9986e-01 4.1872e-08 weaklyHypometh 1.0000e+00 2.0936e-05 weaklyHypometh 9.9999e-01 1.0631e-04 weaklyHypometh 1.0000e+00 0.0314176 weaklyHypometh -0.0406141 2.6519e-01 insignificant 1.0000000 insignificant 0.7700599 0.0508075 0.7099376 15 0.7010296 0.124447 0.5765821 2.7148e-59 1.0000e+00 hypermethylated 2.7148e-56 1.0000e+00 hypermethylated 3.3788e-18 1.0000e+00 hypermethylated 3.3788e-15 1.0000e+00 hypermethylated 0.6098903 4.8901e-06 hypermethylated 1.8794e-03 hypermethylated chr5 136682650 136683650 21637 A,ENSG00000222285 0.8721726 238 9 0.7582149 379 13 0.7845085 112 12 0.7743060 146 6 0.9045788 103 8 0.750002 210 13 0.7121763 93 4 0.8403985 203 13 0.9170814 80 7 0.9102672 112 12 0.8808094 404 13 0.6836243 78 9 0.8260442 255 13 0.6870915 76 4 0.8356843 152 11 0.8772894 49 3 0.7600000 24 2 0.6826919 234 9 0.85453914 203 9 0.8084961 130 12 0.822024 73 6 0.8652778 40 3 0.919581 194 8 0.6958333 67 7 0.760088 87 7 0.8101471 365 13 0.915931 148 11 0.563095 27 2 0.8395918 288 9 0.7815845 345 13 0.8120970 396 13 0.8092674 238 13 0.7876204 280 13 0.7764163 281 13 0.838667 180 9 0.7708333 14 0 0.838052 95 6 0.8695538 317 12 0.7726051 155 11 0.856044 191 12 0.8107515 198 10 0.9448436 102 6 0.784573 114 10 0.8309896 0.7458424 0.8024337 0.7838812 0.90029762 0.775922 0.7467600 0.8538366 0.8920740 0.8966374 0.8535880 0.7363212 0.8566111 0.7484086 0.7967188 0.82545518 0.8020722 0.8331965 0.84627894 0.8326528 0.7821073 0.8071949 0.881583 0.8831753 0.8122591 0.8200142 0.9047659 0.7166436 0.86217103 0.7922996 0.8360117 0.8282252 0.77277205 0.7322646 0.8191037 0.6709007 0.814386 0.8425216 0.8188122 0.8174720 0.8048669 0.9062904 0.836074 1 0.8204580 0.8712522 -0.01296216 13 0.730488 0.728953 0.0015346 0.9940298 5.1797e-01 insignificant 1 1.0000e+00 insignificant 0.983166 8.1998e-01 insignificant 1 1.000000 insignificant 0.0064557 0.846652 insignificant 1 insignificant 0.8211009 0.8234790 0.03492950 11 0.776585 0.8337836 -0.05719848 6.7294e-02 1.0583e-01 insignificant 8.8545e-01 1.0000e+00 insignificant 2.2113e-01 1.6458e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0075250 7.5800e-01 insignificant 1.0000e+00 insignificant 0.8220313 0.813158 -1.2796e-02 12 0.811444 0.826429 -0.0149844 8.3028e-01 8.9827e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3281e-01 1.1774e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0277646 4.6391e-01 insignificant 1.00000000 insignificant 0.871908 0.8234790 0.05061849 11 0.808077 0.8337836 -0.0257067 6.3569e-04 4.9363e-01 weaklyHypermeth 1.4784e-02 1.0000e+00 weaklyHypermeth 1.1264e-01 5.8718e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0139807 6.7303e-01 insignificant 1.0000e+00 insignificant 0.8721805 0.813158 -0.00073533 12 0.8170119 0.826429 -0.0094169 5.8457e-01 1.2383e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.7679e-01 1.9247e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0342203 4.3259e-01 insignificant 1.0000000 insignificant 0.8231760 0.8131579 -0.0458269 10 0.8082119 0.826429 -0.0182169 3.4759e-01 7.5439e-03 weaklyHypometh 1.0000e+00 1.4507e-01 insignificant 7.9290e-01 2.2833e-02 weaklyHypometh 1.0000e+00 4.8581e-01 insignificant -0.0202396 5.8737e-01 insignificant 1.0000e+00 insignificant chr5 138610550 138611550 21689 A,ENSG00000208799 0.8177003 476 12 0.7919890 247 11 0.5868117 178 9 0.8473977 288 12 0.8403043 131 11 0.729078 441 11 0.8445603 134 10 0.8872567 197 9 0.8370316 146 12 0.7205937 108 8 0.8103838 433 12 0.5339286 57 5 0.8106477 209 12 0.7430020 71 7 0.8403606 160 11 0.7915751 76 7 0.8125000 309 3 0.8766394 304 12 0.77151159 274 9 0.7543604 346 11 0.730952 98 9 0.6554185 104 9 0.872207 182 12 0.7983626 113 8 0.876323 65 6 0.8647866 274 11 0.777734 134 8 0.738384 43 5 0.7791771 184 9 0.8693319 290 11 0.8282976 239 11 0.8241062 455 12 0.6874288 201 9 0.7760989 163 11 0.708231 263 11 0.8333333 24 2 0.816513 136 9 0.7947979 258 11 0.8865043 348 12 0.820504 411 12 0.8423281 354 12 0.8625488 289 12 0.887484 350 12 0.8342216 0.7700715 0.7431825 0.8533917 0.81889013 0.796840 0.8264211 0.8667350 0.8413174 0.8301587 0.8713353 0.5854839 0.8283061 0.8233788 0.8966635 0.74014337 0.8064516 0.8830494 0.80481277 0.8172302 0.8221198 0.8170868 0.889105 0.8866252 0.8814360 0.8593300 0.8473346 0.8080699 0.74973949 0.8527146 0.8496763 0.8431854 0.76528139 0.7850381 0.7867021 0.8517731 0.862036 0.8667158 0.8938050 0.8877029 0.8457587 0.8784678 0.877855 4 0.8497274 0.8431912 -0.00792363 11 0.791641 0.793280 -0.0016388 0.7477967 6.4794e-01 insignificant 1 1.0000e+00 insignificant 0.976714 2.6422e-01 insignificant 1 1.000000 insignificant -0.0188751 0.507122 insignificant 1 insignificant 0.8497274 0.8267943 0.01717148 11 0.791641 0.7319894 0.05965161 3.7933e-02 9.7958e-01 weaklyHypermeth 5.4191e-01 1.0000e+00 insignificant 6.9179e-01 7.0237e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0129813 6.8513e-01 insignificant 1.0000e+00 insignificant 0.8499672 0.901826 -3.9246e-02 11 0.813860 0.860146 -0.0462861 9.9979e-01 2.7284e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9925e-01 8.3082e-03 weaklyHypometh 1.0000e+00 0.64015655 insignificant -0.0774922 3.7287e-03 weaklyHypometh 0.21698178 insignificant 0.843191 0.8267943 0.02776148 11 0.793280 0.7319894 0.0612904 3.4685e-03 8.9138e-01 weaklyHypermeth 6.8010e-02 1.0000e+00 weaklyHypermeth 1.6052e-01 9.2943e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0318564 3.2826e-01 insignificant 1.0000e+00 insignificant 0.8437788 0.901826 -0.03287088 11 0.8012726 0.860146 -0.0588733 9.9243e-01 2.4796e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.4944e-01 3.1379e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0586171 2.5632e-02 weaklyHypometh 1.0000000 insignificant 0.8274209 0.9018265 -0.0562878 11 0.7629213 0.860146 -0.0972246 9.8103e-01 1.6109e-03 weaklyHypometh 1.0000e+00 3.9290e-02 weaklyHypometh 9.3488e-01 1.5458e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0904735 1.1769e-02 weaklyHypometh 3.9230e-01 insignificant chr5 138996750 138997750 21704 UBE2D2 A,ENSG00000131508 0.0499660 2046 39 0.0303228 1495 38 0.0378001 1589 39 0.0522570 1216 38 0.0054832 963 39 0.076216 2298 39 0.0029919 1830 38 0.0068747 1480 38 0.0043172 1559 39 0.0367606 1405 39 0.0354439 1395 38 0.0110598 1279 39 0.0088119 1408 39 0.0238095 191 13 0.0116197 1384 39 0.0052344 1090 38 0.0152208 1223 25 0.0585283 1854 38 0.04807527 1170 38 0.0318994 1980 38 0.029731 783 38 0.0045140 746 31 0.013999 1378 38 0.0265625 675 39 0.039186 613 38 0.0037926 1907 38 0.013220 1201 39 0.016125 493 37 0.0105368 1619 38 0.0290655 1789 38 0.0408797 1733 39 0.0146198 2320 38 0.0351411 1185 38 0.0030585 1227 38 0.058529 871 34 0.0112903 456 22 0.043819 436 37 0.0552296 1695 38 0.0052762 1908 38 0.057984 1635 38 0.0079065 1277 38 0.0332688 2154 31 0.015665 1574 38 0.0073832 0.0037510 0.0132164 0.0036070 0.00501613 0.022646 0.0035656 0.0064289 0.0055315 0.0107343 0.0114944 0.0095441 0.0077265 0.0070429 0.0092762 0.00761100 0.0160962 0.0071899 0.02225216 0.0081584 0.0045288 0.0041756 0.017228 0.0017280 0.0082374 0.0039921 0.0116810 0.0071997 0.01160439 0.0050163 0.0064824 0.0161958 0.00863813 0.0033015 0.0063579 0.0092089 0.022215 0.0052978 0.0054434 0.0086755 0.0067677 0.0069758 0.019765 37 0.0102946 0.0096362 0.00062095 38 0.044619 0.043562 0.0010569 0.1249172 9.7606e-01 insignificant 1 1.0000e+00 insignificant 0.041947 9.9997e-01 weaklyHypermeth 1 1.000000 insignificant 0.0074487 0.225259 insignificant 1 insignificant 0.0103300 0.0074996 0.00334450 38 0.067347 0.0592422 0.00810432 4.6326e-02 9.9920e-01 weaklyHypermeth 6.5248e-01 1.0000e+00 insignificant 6.1581e-02 9.9925e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0068766 5.3152e-01 insignificant 1.0000e+00 insignificant 0.0103632 0.010183 4.2207e-04 38 0.071406 0.052622 0.0187837 4.1734e-01 4.0588e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.8605e-01 4.0942e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0036146 7.5151e-01 insignificant 1.00000000 insignificant 0.009703 0.0074996 0.00244178 38 0.066290 0.0592422 0.0070474 5.0041e-01 9.9192e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.9936e-01 9.6555e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0143253 1.9904e-01 insignificant 1.0000e+00 insignificant 0.0096381 0.010068 -0.00014354 38 0.0445755 0.031814 0.0127619 9.3647e-01 4.2983e-03 weaklyHypometh 1.0000e+00 3.5819e-01 insignificant 9.8757e-01 1.3498e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant -0.0038341 7.2830e-01 insignificant 1.0000000 insignificant 0.0074983 0.0101826 -0.0021974 38 0.0579257 0.052622 0.0053039 9.9977e-01 1.0430e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9987e-01 3.4738e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0104912 4.5886e-01 insignificant 1.0000e+00 insignificant chr5 139019950 139020950 21707 CXXC5 A,ENSG00000171604 0.6056692 212 8 0.5915688 337 11 0.5642599 264 11 0.6701920 186 9 0.4668210 79 5 0.642202 237 10 0.6570495 133 7 0.6167875 161 8 0.5718551 168 8 0.6508129 150 8 0.7788624 211 8 0.5354825 78 8 0.4381261 292 8 0.5520468 49 3 0.4384319 166 8 0.4090909 34 3 0.5658505 78 7 0.3710817 241 9 0.52555465 148 8 0.5880101 217 10 0.639571 78 5 0.2949454 149 8 0.657299 180 10 0.4460078 131 8 0.528408 98 8 0.6834707 353 11 0.547155 133 8 0.422262 74 3 0.5851456 166 8 0.6894705 377 11 0.6713698 381 11 0.8289896 299 9 0.0793806 364 11 0.0596675 167 8 0.074617 117 7 0.1105903 102 8 0.126790 162 8 0.1680678 372 11 0.4176102 302 10 0.312362 368 11 0.3874714 190 8 0.3194395 282 9 0.393595 304 9 0.5260866 0.5770314 0.5573247 0.6401633 0.48145567 0.700386 0.6053743 0.6041826 0.5827466 0.6656698 0.7140910 0.5591830 0.4243018 0.5679599 0.4577409 0.47840138 0.5675156 0.3073118 0.48502848 0.6378247 0.7210557 0.3343576 0.738516 0.5768030 0.5144488 0.6822633 0.5399617 0.4984081 0.57791790 0.6883192 0.7073273 0.8002634 0.05590823 0.0474588 0.0996138 0.0693186 0.027607 0.0934834 0.4058383 0.3945562 0.3503622 0.3718891 0.304789 4 0.5672770 0.6614303 -0.09135000 8 0.543106 0.587928 -0.0448221 0.9989382 4.1402e-03 weaklyHypometh 1 7.6020e-01 insignificant 0.985947 2.8624e-01 insignificant 1 1.000000 insignificant -0.0208534 0.665317 insignificant 1 insignificant 0.5672770 0.0966485 0.48152491 8 0.543106 0.1807163 0.36238941 1.1179e-37 1.0000e+00 hypermethylated 5.5896e-35 1.0000e+00 hypermethylated 1.9152e-20 1.0000e+00 hypermethylated 9.5759e-18 1.0000e+00 hypermethylated 0.4588022 1.1667e-13 hypermethylated 3.8889e-11 hypermethylated 0.5673945 0.317427 2.1811e-01 8 0.587307 0.339634 0.2476729 9.8063e-15 1.0000e+00 hypermethylated 3.2688e-12 1.0000e+00 hypermethylated 1.0605e-10 1.0000e+00 hypermethylated 3.5351e-08 1.00000000 hypermethylated 0.1958922 1.6246e-05 weaklyHypermeth 0.00406158 weaklyHypermeth 0.661430 0.0966485 0.57250692 10 0.587928 0.1807163 0.4072115 3.2635e-39 1.0000e+00 hypermethylated 1.6317e-36 1.0000e+00 hypermethylated 1.2554e-16 1.0000e+00 hypermethylated 6.2771e-14 1.0000e+00 hypermethylated 0.4796556 4.2755e-08 hypermethylated 6.1078e-06 hypermethylated 0.6621118 0.317427 0.31992316 9 0.6493692 0.339634 0.3097353 8.7433e-20 1.0000e+00 hypermethylated 2.9144e-17 1.0000e+00 hypermethylated 1.1096e-09 9.9997e-01 hypermethylated 3.6987e-07 1.0000000 hypermethylated 0.2167456 3.4388e-04 hypermethylated 0.0491263 hypermethylated 0.0949765 0.3174274 -0.2512008 9 0.0999375 0.339634 -0.2396964 1.0000e+00 3.9718e-14 hypomethylated 1.0000e+00 7.9436e-12 hypomethylated 1.0000e+00 4.9661e-09 hypomethylated 1.0000e+00 1.8612e-06 hypomethylated -0.2629100 9.9782e-06 hypomethylated 2.2628e-03 hypomethylated chr5 139027850 139028850 21709 CXXC5 A,ENSG00000171604 0.2685697 367 18 0.1874608 552 18 0.2719483 666 18 0.3932324 234 7 0.1140196 518 18 0.610676 306 18 0.1874108 787 18 0.4380117 297 15 0.2929038 309 18 0.3014867 504 18 0.3837873 586 18 0.1930699 797 13 0.2248802 573 18 0.6041667 33 2 0.6543431 390 18 0.1041378 829 18 0.0279243 805 11 0.0701200 798 18 0.14985890 624 18 0.3832034 400 18 0.260694 99 9 0.2239234 127 7 0.555662 224 18 0.7131579 46 2 0.774089 319 7 0.8979323 245 15 0.443868 125 11 0.416667 31 0 0.3659302 420 18 0.5891517 314 16 0.1299553 761 18 0.4542039 369 18 0.0012077 557 18 0.0074530 675 18 0.054276 274 16 0.0138889 331 7 0.061374 159 11 0.0274600 951 18 0.1368840 360 18 0.152582 379 18 0.1807104 282 7 0.5138316 304 18 0.023802 379 18 0.3293792 0.1810230 0.3386484 0.3567923 0.16716182 0.661321 0.3557714 0.5142329 0.3184520 0.3229480 0.3920757 0.2711776 0.3184472 0.4376779 0.7018625 0.17371188 0.2833035 0.1335688 0.22204765 0.4012744 0.2919101 0.2262043 0.662988 0.8478088 0.6233510 0.9101716 0.3772853 0.6334829 0.38574691 0.6529238 0.1269097 0.5461321 0.00069288 0.0051701 0.0224104 0.0079681 0.041780 0.0017322 0.1625506 0.1519509 0.1773141 0.4348958 0.048903 2 0.2157808 0.4192920 -0.17869433 18 0.226164 0.447769 -0.2216057 1.0000000 1.0825e-12 weaklyHypometh 1 1.0825e-09 weaklyHypometh 1.000000 2.5196e-05 weaklyHypometh 1 0.025196 weaklyHypometh -0.1923756 0.023364 weaklyHypometh 1 insignificant 0.2158981 0.0084861 0.22289070 18 0.267830 0.0218824 0.24594793 3.8235e-25 1.0000e+00 hypermethylated 5.4621e-23 1.0000e+00 hypermethylated 5.2912e-30 1.0000e+00 hypermethylated 5.2912e-27 1.0000e+00 hypermethylated 0.2654506 2.5263e-06 hypermethylated 2.1471e-04 hypermethylated 0.2150808 0.177817 9.2528e-02 18 0.309621 0.203696 0.1059247 2.9290e-03 9.4991e-01 weaklyHypermeth 1.9527e-01 1.0000e+00 insignificant 2.1978e-05 9.9962e-01 weaklyHypermeth 4.3955e-03 1.00000000 weaklyHypermeth 0.0914985 3.5732e-01 insignificant 1.00000000 insignificant 0.419292 0.0084861 0.40997614 18 0.447769 0.0218824 0.4258870 1.2325e-28 1.0000e+00 hypermethylated 2.4650e-26 1.0000e+00 hypermethylated 1.5454e-23 1.0000e+00 hypermethylated 1.5454e-20 1.0000e+00 hypermethylated 0.4578262 2.4165e-05 hypermethylated 1.8415e-03 hypermethylated 0.4184374 0.177438 0.24909319 18 0.4118407 0.170774 0.2410670 1.3358e-10 1.0000e+00 hypermethylated 1.9170e-08 1.0000e+00 hypermethylated 3.5527e-08 1.0000e+00 hypermethylated 8.8819e-06 1.0000000 hypermethylated 0.2838741 2.4342e-02 weaklyHypermeth 1.0000000 insignificant 0.0078445 0.1774383 -0.1632569 18 0.0106580 0.170774 -0.1601157 1.0000e+00 7.2816e-14 weaklyHypometh 1.0000e+00 1.2136e-11 weaklyHypometh 1.0000e+00 5.4943e-14 weaklyHypometh 1.0000e+00 5.4943e-11 weaklyHypometh -0.1739522 1.0246e-01 insignificant 1.0000e+00 insignificant chr5 139056550 139057550 21714 CXXC5 A,ENSG00000171604 0.0806138 577 24 0.0698749 790 25 0.0822545 1358 29 0.1015054 649 22 0.0602722 417 22 0.181038 897 25 0.0388394 708 24 0.0328678 604 25 0.0825994 967 25 0.0967574 1181 23 0.0925476 552 26 0.0213767 693 23 0.0207984 874 22 0.0613291 647 23 0.0693926 1081 23 0.0141983 698 23 0.0096257 226 16 0.0689224 728 25 0.03990898 515 19 0.0927587 804 25 0.061180 298 17 0.0394623 612 23 0.085908 487 24 0.0745310 466 27 0.094288 520 21 0.0807063 850 25 0.038800 795 22 0.089414 495 26 0.0423907 363 19 0.0914134 1090 25 0.1274912 838 26 0.0568860 808 26 0.0542407 781 29 0.0611472 364 22 0.054900 220 13 0.0046296 241 17 0.111625 389 28 0.0545455 732 26 0.1750323 664 24 0.100749 499 26 0.0423848 371 19 0.0457296 532 22 0.053471 537 24 0.0383715 0.0660724 0.0533959 0.0208160 0.02624162 0.065986 0.0475613 0.0483503 0.0356269 0.0304995 0.0478658 0.0268142 0.0160749 0.0343900 0.0349814 0.01419975 0.0163474 0.0425702 0.05000807 0.0404271 0.0176566 0.0074385 0.064306 0.0175925 0.0315481 0.0398856 0.0382448 0.0324916 0.02379534 0.0509832 0.0605701 0.0450808 0.05441116 0.0098661 0.0540913 0.0096454 0.048326 0.0383260 0.0391532 0.0391229 0.0193826 0.0514044 0.040685 18 0.0482459 0.0637628 -0.00791833 25 0.079548 0.076951 0.0025972 0.3138327 9.2119e-01 insignificant 1 1.0000e+00 insignificant 0.303815 9.9231e-01 insignificant 1 1.000000 insignificant -0.0076652 0.520624 insignificant 1 insignificant 0.0482524 0.0696736 -0.01062148 25 0.083336 0.0859875 -0.00265130 9.3321e-04 9.9984e-01 inconclusive 1.8664e-02 1.0000e+00 inconclusive 2.2414e-03 1.0000e+00 inconclusive 6.0579e-02 1.0000e+00 inconclusive 0.0090260 5.9628e-01 insignificant 1.0000e+00 insignificant 0.0479351 0.043411 3.9619e-03 22 0.072920 0.094905 -0.0219845 5.7822e-01 3.1022e-02 inconclusive 1.0000e+00 1.0000e+00 insignificant 7.5135e-01 4.4505e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0175992 5.3899e-01 insignificant 1.00000000 insignificant 0.063765 0.0696736 0.00528082 25 0.077639 0.0859875 -0.0083483 6.4961e-02 1.0000e+00 insignificant 8.8988e-01 1.0000e+00 insignificant 1.2037e-01 1.0000e+00 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0166912 3.2275e-01 insignificant 1.0000e+00 insignificant 0.0632777 0.043411 0.01364433 22 0.0750172 0.094905 -0.0198877 8.0153e-01 8.6422e-03 inconclusive 1.0000e+00 6.3996e-01 insignificant 9.5720e-01 9.5684e-02 insignificant 1.0000e+00 1.0000000 insignificant -0.0099340 7.2238e-01 insignificant 1.0000000 insignificant 0.0691568 0.0434114 0.0135133 22 0.0555669 0.094905 -0.0393380 9.8788e-01 5.1625e-04 inconclusive 1.0000e+00 1.5056e-02 inconclusive 9.9999e-01 1.1774e-02 inconclusive 1.0000e+00 3.0190e-01 insignificant -0.0266253 3.8843e-01 insignificant 1.0000e+00 insignificant chr5 139068550 139069550 21717 CXXC5 A,ENSG00000171604 0.0220121 1269 30 0.0184419 1403 33 0.0197876 1529 32 0.0087694 1723 32 0.0545748 1046 32 0.084008 1854 31 0.0559249 1451 33 0.1075125 1270 32 0.0926913 2104 34 0.0436548 1947 33 0.0420871 1071 33 0.0214494 1325 32 0.0438583 1414 31 0.0374943 913 25 0.0536402 1661 33 0.0263984 1136 32 0.0310409 889 22 0.0581765 1880 33 0.08674560 1061 31 0.1144930 1477 33 0.060253 710 33 0.0183933 1340 32 0.038313 1078 33 0.0503210 816 34 0.036905 951 33 0.0056803 1629 32 0.022464 1381 33 0.042438 989 36 0.0516827 1300 31 0.0438450 1860 32 0.0288178 1697 32 0.0688151 1614 33 0.0311503 1004 33 0.0548911 896 33 0.062430 1080 23 0.0666958 438 27 0.074755 903 31 0.0801483 1472 32 0.0393459 1671 30 0.050251 1527 32 0.0114514 1250 32 0.1233320 1623 32 0.078810 1762 32 0.0115594 0.0094875 0.0113010 0.0120466 0.02238409 0.026028 0.0265928 0.0226710 0.0081484 0.0146946 0.0061533 0.0151629 0.0191016 0.0111998 0.0180608 0.01218402 0.0160280 0.0181811 0.01463767 0.0305461 0.0331900 0.0087636 0.021450 0.0254416 0.0196010 0.0084512 0.0212616 0.0153976 0.01740101 0.0052730 0.0043867 0.0223671 0.02645259 0.0255652 0.0181529 0.0300221 0.050687 0.0165470 0.0104911 0.0109195 0.0043999 0.0108348 0.032524 29 0.0188931 0.0175073 0.00194147 33 0.090479 0.049394 0.0410858 0.2219763 9.9724e-01 insignificant 1 1.0000e+00 insignificant 0.232177 9.9990e-01 insignificant 1 1.000000 insignificant 0.0121439 0.172108 insignificant 1 insignificant 0.0188281 0.0295184 -0.00671391 33 0.079255 0.0545247 0.02473047 7.3285e-01 2.1254e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 7.6406e-01 7.5614e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0105404 3.0520e-01 insignificant 1.0000e+00 insignificant 0.0187610 0.014937 -2.8471e-04 32 0.068258 0.117851 -0.0495929 6.7668e-01 2.7355e-04 weaklyHypometh 1.0000e+00 4.9774e-02 weaklyHypometh 8.4396e-01 1.1165e-02 weaklyHypometh 1.0000e+00 0.78145533 insignificant -0.0095001 6.5837e-01 insignificant 1.00000000 insignificant 0.017476 0.0295184 -0.00965457 33 0.051452 0.0545247 -0.0030724 9.8758e-01 7.1066e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8930e-01 2.8405e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0226843 2.6838e-02 weaklyHypometh 7.4550e-01 insignificant 0.0174180 0.014937 -0.00308614 32 0.0425896 0.117851 -0.0752609 9.8384e-01 1.9087e-03 weaklyHypometh 1.0000e+00 2.6986e-01 insignificant 9.9669e-01 2.0676e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant -0.0216441 3.2653e-01 insignificant 1.0000000 insignificant 0.0293711 0.0149368 0.0050786 32 0.0458984 0.117851 -0.0719522 7.5012e-01 9.1535e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6892e-01 6.1708e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0010403 9.6110e-01 insignificant 1.0000e+00 insignificant chr5 139070650 139071650 21718 CXXC5 A,ENSG00000171604 0.0209904 1236 32 0.0403554 982 40 0.0049642 1026 41 0.0122086 1653 36 0.0408607 782 36 0.041421 1773 36 0.0038248 1404 41 0.0444132 936 41 0.0160025 1789 41 0.0080943 1495 37 0.0239630 948 39 0.0037669 1022 41 0.0770226 1333 39 0.1004059 566 26 0.0440100 1123 35 0.0156739 867 31 0.0015677 781 33 0.0015356 1804 30 0.05019643 455 30 0.0039366 1451 36 0.049905 508 37 0.0438420 1206 35 0.057168 1143 37 0.0320695 614 35 0.033340 1021 35 0.0260318 1266 41 0.041394 939 37 0.078541 662 27 0.0034101 709 29 0.0269659 1320 41 0.0246107 1074 41 0.0469751 1863 37 0.0211640 841 41 0.0200532 832 37 0.078671 403 11 0.0021368 541 33 0.065826 559 31 0.0214665 951 38 0.0328687 1776 31 0.033415 1576 37 0.0244509 1317 31 0.0045154 1570 30 0.011235 1829 41 0.0105672 0.0085562 0.0023862 0.0085292 0.00221153 0.011844 0.0046412 0.0046142 0.0022756 0.0041634 0.0108281 0.0018178 0.0054849 0.0065283 0.0185460 0.00409022 0.0021705 0.0024819 0.01548976 0.0034744 0.0128405 0.0092399 0.022209 0.0046649 0.0025119 0.0033855 0.0171654 0.0232547 0.00397872 0.0030792 0.0033156 0.0051186 0.00561591 0.0083611 0.0309382 0.0021098 0.025073 0.0098233 0.0047715 0.0078648 0.0035207 0.0051741 0.012972 27 0.0085813 0.0114429 -0.00291391 41 0.054275 0.073744 -0.0194689 0.9719383 2.2854e-01 insignificant 1 1.0000e+00 insignificant 0.900660 5.3666e-01 insignificant 1 1.000000 insignificant -0.0109271 0.190715 insignificant 1 insignificant 0.0085824 0.0138182 -0.00413502 36 0.055360 0.0326306 0.02272983 9.8677e-01 1.4980e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8472e-01 7.9782e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0071256 6.1775e-01 insignificant 1.0000e+00 insignificant 0.0083298 0.007065 -4.8758e-05 31 0.046286 0.027646 0.0186406 9.2646e-01 7.9777e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6969e-01 8.5506e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0064637 4.5309e-01 insignificant 1.00000000 insignificant 0.011443 0.0140538 -0.00074934 36 0.073744 0.0417947 0.0319491 9.9068e-01 9.3070e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9749e-01 9.9071e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0038015 7.8577e-01 insignificant 1.0000e+00 insignificant 0.0112834 0.007065 0.00162692 31 0.0461415 0.027646 0.0184960 9.5344e-01 9.2239e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9270e-01 9.5714e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0173908 5.1811e-02 insignificant 1.0000000 insignificant 0.0138383 0.0070658 0.0033887 31 0.0339902 0.028222 0.0057687 9.5977e-01 9.9984e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9913e-01 9.9991e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0135893 3.5067e-01 insignificant 1.0000e+00 insignificant chr5 139105950 139106950 21721 A,ENSG00000200756 0.0089426 449 12 0.1422619 175 7 0.0071429 156 7 0.0219994 496 12 0.0095238 119 7 0.223852 284 12 0.0081633 230 7 0.0190476 135 7 0.0000000 175 7 0.0000000 134 7 0.1431214 293 7 0.0211640 167 7 0.0259740 87 7 0.0089286 104 7 0.0000000 217 7 0.0337662 92 7 0.0000000 2 0 0.1029733 436 12 0.07653061 242 10 0.0805861 196 12 0.000000 177 7 0.0000000 158 7 0.015670 120 9 0.0505051 95 7 0.013738 755 7 0.0025641 283 12 0.021978 126 7 0.055556 99 7 0.1250000 150 7 0.0000000 248 11 0.0046952 319 12 0.0000000 282 10 0.0261523 160 7 0.0306878 196 7 0.190476 697 12 0.1224415 215 11 0.127878 106 7 0.0272413 441 12 0.0250597 387 12 0.025943 352 12 0.0807692 201 10 0.0990954 264 11 0.033100 300 12 0.0138985 0.0226803 0.0068233 0.0156450 0.00820283 0.021769 0.0070310 0.0181954 0.0000000 0.0000000 0.0205481 0.0202171 0.0223714 0.0099273 0.0000000 0.03530608 NA 0.0557581 0.00886865 0.0064983 0.0000000 0.0000000 0.027285 0.0758141 0.0153635 0.0041760 0.0189296 0.0000000 0.00000000 0.0000000 0.0092065 0.0000000 0.02440885 0.0265805 0.0000000 0.1758016 0.053132 0.0227215 0.0224878 0.0425759 0.0061521 0.0144152 0.063457 7 0.0229446 0.0096085 0.01015853 10 0.167053 0.017884 0.1491683 0.6304431 1.0000e+00 insignificant 1 1.0000e+00 insignificant 0.461112 1.0000e+00 insignificant 1 1.000000 insignificant 0.0225568 0.209294 insignificant 1 insignificant 0.0194431 0.0231788 -0.00134694 10 0.146316 0.1786758 -0.03235977 9.2835e-01 9.9695e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7253e-01 2.7686e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0407806 2.3433e-01 insignificant 1.0000e+00 insignificant 0.0187410 0.027297 -1.2554e-02 10 0.095790 0.092442 0.0033473 9.9480e-01 5.2329e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9968e-01 4.8488e-03 weaklyHypometh 1.0000e+00 0.48488227 insignificant -0.0060946 7.7509e-01 insignificant 1.00000000 insignificant 0.009636 0.0231788 -0.01030608 10 0.022356 0.1786758 -0.1563202 1.0000e+00 7.3026e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.0000e+00 5.8416e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0633374 7.8099e-02 insignificant 1.0000e+00 insignificant 0.0089574 0.027963 -0.02166024 10 0.0051411 0.163871 -0.1587298 1.0000e+00 2.1289e-06 weaklyHypometh 1.0000e+00 5.3223e-04 weaklyHypometh 1.0000e+00 4.4514e-06 weaklyHypometh 1.0000e+00 0.0044514 weaklyHypometh -0.0286514 1.6671e-01 insignificant 1.0000000 insignificant 0.0221239 0.0273151 -0.0089019 10 0.1045240 0.099553 0.0049707 9.9822e-01 2.4385e-02 weaklyHypometh 1.0000e+00 3.9331e-01 insignificant 9.3786e-01 1.7664e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0346860 3.1572e-01 insignificant 1.0000e+00 insignificant chr5 139106350 139107350 21722 A,ENSG00000200756 0.0336235 533 16 0.1021088 534 14 0.0225267 568 14 0.0414996 491 14 0.0230423 363 14 0.226781 469 16 0.0139339 816 14 0.0376389 445 14 0.0108005 604 14 0.0110785 571 14 0.0944625 677 14 0.0216527 640 14 0.0288110 497 14 0.0089286 104 7 0.0060936 571 14 0.0311968 498 14 0.0100043 409 7 0.1174240 487 15 0.06665164 497 14 0.1006289 428 16 0.025811 330 14 0.0317460 233 12 0.043575 360 14 0.0513770 255 14 0.042142 818 9 0.0167610 688 16 0.059045 298 14 0.070162 247 14 0.1178601 472 14 0.0224704 649 15 0.0394825 612 16 0.0276923 523 14 0.0400619 539 13 0.0356671 476 14 0.114948 753 14 0.0918311 227 13 0.109942 238 14 0.0355575 743 16 0.0439952 501 16 0.042824 414 16 0.0676471 231 12 0.0097763 345 15 0.075568 345 16 0.0305469 0.0331483 0.0161513 0.0247555 0.02071131 0.058067 0.0128230 0.0302164 0.0077884 0.0109633 0.0233271 0.0203440 0.0253927 0.0216173 0.0116207 0.02933010 0.0126477 0.0618668 0.01078375 0.0368158 0.0238898 0.0221325 0.041829 0.0638736 0.0400788 0.0161687 0.0455711 0.0310332 0.03875760 0.0172073 0.0327296 0.0272741 0.03253501 0.0301254 0.0077157 0.1057649 0.058422 0.0265925 0.0286782 0.0431027 0.0090848 0.0105567 0.086047 12 0.0276552 0.0291811 -0.00294076 14 0.159636 0.038007 0.1216296 0.5729589 9.5100e-01 insignificant 1 1.0000e+00 insignificant 0.150366 9.9269e-01 insignificant 1 1.000000 insignificant 0.0047675 0.745645 insignificant 1 insignificant 0.0262305 0.0302725 -0.00293072 14 0.140612 0.1172492 0.02336306 3.9407e-01 5.0825e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.1479e-01 2.3447e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0208903 3.1336e-01 insignificant 1.0000e+00 insignificant 0.0259459 0.036532 -7.1443e-03 14 0.098331 0.036678 0.0616536 7.7738e-01 1.5761e-02 weaklyHypometh 1.0000e+00 7.8806e-01 insignificant 5.8799e-01 3.3905e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant 0.0024824 8.8438e-01 insignificant 1.00000000 insignificant 0.029224 0.0302725 -0.00020702 14 0.046008 0.1172492 -0.0712412 7.3287e-01 2.1907e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.9153e-01 3.2309e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0256577 1.8345e-01 insignificant 1.0000e+00 insignificant 0.0289165 0.037077 -0.00453505 14 0.0346140 0.095501 -0.0608874 8.9021e-01 9.8827e-07 weaklyHypometh 1.0000e+00 3.2942e-04 weaklyHypometh 8.7577e-01 1.2567e-04 weaklyHypometh 1.0000e+00 0.0314176 weaklyHypometh -0.0022851 8.7431e-01 insignificant 1.0000000 insignificant 0.0296396 0.0365521 -0.0057174 14 0.0454835 0.038970 0.0065133 9.9211e-01 3.4255e-02 weaklyHypometh 1.0000e+00 5.1126e-01 insignificant 8.5023e-01 2.9010e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0233726 2.6059e-01 insignificant 1.0000e+00 insignificant chr5 139971650 139972650 21751 A,ENSG00000213519 0.8210297 389 10 0.7930502 177 10 0.7053626 165 11 0.8179924 206 9 0.5866162 77 8 0.793884 261 10 0.6643841 138 10 0.7674964 106 11 0.6791273 95 9 0.7979364 129 11 0.7456270 258 11 0.6640693 88 9 0.8290043 119 11 NA 0 0 0.7243506 105 11 0.7941919 87 9 0.6725289 103 10 0.7402712 230 10 0.81608392 171 10 0.8252498 177 9 0.751299 46 3 0.5473319 64 6 0.822006 180 10 0.6607143 30 3 0.779752 64 5 0.7226453 210 11 0.781169 88 9 0.712121 39 1 0.7830196 148 9 0.7547948 222 11 0.8036856 221 11 0.8061873 350 11 0.6721140 126 6 0.7571406 169 11 0.731253 189 9 0.7748918 67 7 0.679556 80 6 0.7604670 245 11 0.8763812 245 10 0.826797 334 10 0.8003973 241 9 0.8589247 335 9 0.796360 262 10 0.8122219 0.7652493 0.7236728 0.8035161 0.66800909 0.810570 0.7017920 0.7963165 0.7187370 0.8428911 0.7782970 0.6917685 0.8446849 NA 0.7817977 0.80839529 0.6702366 0.7605335 0.82663871 0.8387879 0.7402372 0.6618558 0.807739 0.7876951 0.8131013 0.7727863 0.8154364 0.7168525 0.79571846 0.7882897 0.8050151 0.8218093 0.67825426 0.6783644 0.7242419 0.7441671 0.694936 0.7451244 0.8894604 0.8321808 0.8108371 0.8597644 0.783409 3 0.7702045 0.7845969 -0.00877359 11 0.770233 0.771943 -0.0017105 0.7642260 1.7426e-01 insignificant 1 1.0000e+00 insignificant 0.754091 3.1551e-01 insignificant 1 1.000000 insignificant 0.0056548 0.838699 insignificant 1 insignificant 0.7702045 0.7191781 0.06122685 10 0.770233 0.7375303 0.03270267 8.1638e-04 8.5579e-01 weaklyHypermeth 1.6661e-02 1.0000e+00 weaklyHypermeth 1.0560e-02 4.7422e-01 weaklyHypermeth 2.2956e-01 1.0000e+00 insignificant 0.0201447 4.1727e-01 insignificant 1.0000e+00 insignificant 0.7702045 0.820748 -6.2742e-02 10 0.770233 0.838408 -0.0681750 9.9992e-01 1.0565e-03 weaklyHypometh 1.0000e+00 1.5093e-01 insignificant 9.9951e-01 3.0037e-04 weaklyHypometh 1.0000e+00 0.06226384 weaklyHypometh -0.0823901 2.8072e-03 weaklyHypometh 0.20051480 insignificant 0.784597 0.7191781 0.07313394 10 0.771943 0.7375303 0.0344132 6.9047e-05 8.6129e-01 weaklyHypermeth 1.8170e-03 1.0000e+00 weaklyHypermeth 2.0459e-03 7.1441e-01 weaklyHypermeth 6.0174e-02 1.0000e+00 weaklyHypermeth 0.0144899 6.1808e-01 insignificant 1.0000e+00 insignificant 0.7845969 0.820748 -0.04932016 10 0.7719435 0.838408 -0.0664645 9.9847e-01 4.0772e-03 weaklyHypometh 1.0000e+00 3.5819e-01 insignificant 9.9889e-01 2.1349e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant -0.0880449 5.7237e-03 weaklyHypometh 0.4769759 insignificant 0.7191781 0.8207481 -0.1209646 9 0.7375303 0.838408 -0.1008777 9.9971e-01 3.4173e-06 weaklyHypometh 1.0000e+00 1.6675e-04 weaklyHypometh 9.8527e-01 1.1343e-04 weaklyHypometh 1.0000e+00 1.0312e-02 weaklyHypometh -0.1025348 1.9917e-03 weaklyHypometh 1.1705e-01 insignificant chr5 141235350 141236350 21771 PCDH1 A,ENSG00000156453 0.1127073 288 16 0.0281159 254 11 0.0130719 362 11 0.0019531 227 8 0.0060606 278 10 0.113933 381 14 0.0025641 251 14 0.1059524 363 13 0.0301768 297 8 0.0029673 496 6 0.0014815 356 13 0.0000000 418 14 0.0089578 382 15 0.0073269 248 6 0.0465226 578 14 0.0000000 497 15 0.1304348 68 6 0.0526316 357 16 0.10970677 351 15 0.0554748 274 11 0.034759 165 10 0.2697917 180 5 0.079450 178 14 0.0793505 179 7 0.300000 131 6 0.1063373 433 17 0.064754 380 10 0.028125 225 6 0.0000000 239 8 0.1266234 431 15 0.0187678 379 15 0.1459453 290 17 0.0178571 208 11 0.0028986 165 15 0.071121 65 2 0.0000000 86 7 0.092593 189 7 0.0420222 220 13 0.0000000 350 12 0.069444 306 14 0.1025000 242 8 0.0526316 229 10 0.034213 226 8 0.0130006 0.0085738 0.0018594 0.0082940 0.01782915 0.010953 0.0054708 0.0158559 0.0087391 0.0057892 0.0031609 0.0000000 0.0062093 0.0109526 0.0149783 0.00000000 0.0000000 0.0000000 0.00005012 0.0183022 0.0013474 0.0154985 0.044070 0.0182430 0.0251522 0.0029029 0.0056884 0.0052169 0.00000000 0.0030788 0.0057026 0.0074934 0.01008313 0.0089955 0.0253196 0.0037716 0.019915 0.0191750 0.0000000 0.0026940 0.0042295 0.0103221 0.025613 5 0.0107095 0.0199501 -0.00435881 15 0.178549 0.141935 0.0366137 0.9936231 7.5661e-01 insignificant 1 1.0000e+00 insignificant 0.988908 6.9452e-01 insignificant 1 1.000000 insignificant -0.0629900 0.049803 weaklyHypometh 1 insignificant 0.0098405 0.0235798 -0.00744550 9 0.063462 0.0475458 0.01591601 7.7986e-01 3.3846e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.6180e-01 6.3064e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0037534 8.4468e-01 insignificant 1.0000e+00 insignificant 0.0104322 0.010363 1.6224e-03 6 0.159062 0.145511 0.0135509 8.7619e-01 9.9795e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.9394e-01 9.9714e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0102559 6.2455e-01 insignificant 1.00000000 insignificant 0.018478 0.0236052 -0.00198245 9 0.065376 0.0499231 0.0154527 6.3349e-01 7.6489e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.2962e-01 9.0274e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0667435 5.0616e-02 insignificant 1.0000e+00 insignificant 0.0193871 0.010363 0.00429272 6 0.1124629 0.145511 -0.0330483 7.2172e-01 9.9972e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.4815e-01 9.9965e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0527341 1.2415e-01 insignificant 1.0000000 insignificant 0.0236305 0.0074294 0.0098546 6 0.0525507 0.063223 -0.0106728 9.5910e-01 1.0000e+00 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8861e-01 9.9996e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0140094 5.5962e-01 insignificant 1.0000e+00 insignificant chr5 142211050 142212050 21808 ARHGAP26 A,ENSG00000145819 0.6038141 206 5 0.6797710 201 5 0.4784416 85 5 0.6043778 209 5 0.3699634 96 5 0.739196 341 5 0.4920238 63 5 0.6378295 192 5 0.4600313 71 5 0.6831373 66 4 0.6525094 222 5 0.3476190 31 5 0.7324567 129 6 0.7050691 66 4 0.5937791 113 5 0.6400000 32 4 0.5918367 26 3 0.6426428 217 5 0.72383666 142 5 0.7033473 261 5 0.592308 71 5 0.6326030 66 5 0.500000 56 4 0.6401261 89 5 0.641912 68 5 0.6449025 195 5 0.435897 74 5 0.561990 46 5 0.6467672 136 5 0.6966766 207 5 0.5050197 188 5 0.7314270 330 5 0.4195578 112 5 0.4407051 105 5 0.527540 166 5 0.6300000 20 3 0.552053 87 5 0.4949054 213 5 0.6004841 153 5 0.608546 176 5 0.4241758 235 5 0.6265786 110 5 0.599496 228 5 0.5751900 0.5240611 0.4655288 0.5715957 0.47597070 0.605809 0.4497347 0.5997254 0.4804478 0.6536022 0.5701050 0.4754286 0.6288520 0.5406452 0.5233307 0.60000000 0.8138776 0.5744849 0.64619455 0.5965301 0.6240879 0.5530452 0.670286 0.6016206 0.6031513 0.6070789 0.5044505 0.5708673 0.54473757 0.5711451 0.5838090 0.5888009 0.55765986 0.4969597 0.5935075 0.6148571 0.548085 0.5693460 0.5618294 0.5809884 0.5668278 0.5998285 0.555480 4 0.6254966 0.6304063 -0.00677413 5 0.637953 0.595610 0.0423427 0.5742920 3.6377e-01 insignificant 1 1.0000e+00 insignificant 0.802933 1.3735e-01 insignificant 1 1.000000 insignificant 0.0016151 0.964628 lowCoverage 1 lowCoverage 0.6254966 0.6244666 0.01544635 5 0.637953 0.4263825 0.21157034 3.3726e-03 7.2407e-01 weaklyHypermeth 5.9979e-02 1.0000e+00 weaklyHypermeth 6.6821e-02 3.2715e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0932907 4.0276e-02 lowCoverage 1.0000e+00 lowCoverage 0.6252715 0.635255 4.0549e-03 5 0.627048 0.429667 0.1973807 1.5567e-01 8.7061e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.1887e-01 6.6952e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0322280 4.9720e-01 lowCoverage 1.00000000 lowCoverage 0.630406 0.6244666 0.02282679 5 0.595610 0.4263825 0.1692277 4.1073e-03 9.6002e-01 weaklyHypermeth 7.7496e-02 1.0000e+00 weaklyHypermeth 2.0656e-02 8.9934e-01 weaklyHypermeth 3.8251e-01 1.0000e+00 insignificant 0.0916756 4.2916e-02 lowCoverage 1.0000e+00 lowCoverage 0.6300920 0.635255 0.01346861 5 0.5735545 0.429667 0.1438871 8.7134e-02 9.8792e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.0986e-01 9.6878e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0306130 5.1465e-01 lowCoverage 1.0000000 lowCoverage 0.6253561 0.6352550 -0.0059589 5 0.4872943 0.429667 0.0576269 5.7116e-01 6.3193e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.2161e-01 7.8635e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0610627 2.4428e-01 lowCoverage 1.0000e+00 lowCoverage chr5 142914850 142915850 21861 NR3C1 A,ENSG00000113580 0.9045412 498 18 0.9228554 192 12 0.8277507 151 12 0.8884662 420 16 0.8569597 74 6 0.842990 458 15 0.7988939 97 7 0.7772937 127 9 0.9056319 102 10 0.7932110 88 7 0.8078702 308 12 0.8255495 86 9 0.8733897 161 10 NA 0 0 0.8989344 149 12 0.8791444 79 6 0.7123005 157 15 0.8677063 468 17 0.76742645 194 17 0.8389122 370 18 0.843137 51 4 0.6015620 138 13 0.780215 291 19 0.8086908 86 8 0.708384 78 9 0.8099965 304 16 0.732490 91 9 0.781818 42 3 0.8554917 114 9 0.8149005 288 18 0.6708957 276 17 0.8474552 535 17 0.6243481 155 10 0.7638633 169 11 0.794797 337 16 0.7941176 75 10 0.769481 67 6 0.7711976 272 16 0.8581467 397 16 0.907533 415 16 0.8794289 447 16 0.8366696 393 16 0.812365 504 16 0.9229417 0.8943461 0.8151386 0.8793652 0.76909445 0.836157 0.8241995 0.8702614 0.8808344 0.7991320 0.8687628 0.8533937 0.8762253 NA 0.9304452 0.85834464 0.7662858 0.9015971 0.86871909 0.8577042 0.8615257 0.6629776 0.876032 0.8476382 0.8241270 0.8636272 0.8085485 0.8517390 0.82318842 0.8793460 0.8256885 0.8382929 0.71846377 0.7327762 0.7948482 0.7597886 0.804181 0.8654689 0.8981202 0.8905188 0.8537535 0.8332358 0.862902 3 0.8613506 0.8138622 0.03642627 15 0.772759 0.746070 0.0266884 0.0014029 9.9992e-01 weaklyHypermeth 1 1.0000e+00 insignificant 0.021001 9.9984e-01 weaklyHypermeth 1 1.000000 insignificant 0.0703168 0.014333 weaklyHypermeth 1 insignificant 0.8616563 0.7879070 0.07169357 15 0.816237 0.7531772 0.06305984 4.8024e-06 9.9953e-01 weaklyHypermeth 1.5492e-04 1.0000e+00 weaklyHypermeth 9.6617e-04 9.9997e-01 weaklyHypermeth 2.9278e-02 1.0000e+00 weaklyHypermeth 0.0886026 1.7452e-02 weaklyHypermeth 5.2885e-01 insignificant 0.8613506 0.884508 -1.0201e-02 15 0.772759 0.875976 -0.1032175 9.9279e-01 1.3216e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.4419e-01 7.6896e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0172587 4.2831e-01 insignificant 1.00000000 insignificant 0.813781 0.7877095 0.03758268 15 0.734528 0.7419580 -0.0074298 7.2497e-02 9.9718e-01 insignificant 9.6527e-01 1.0000e+00 insignificant 1.6472e-01 9.7533e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0182858 6.0725e-01 insignificant 1.0000e+00 insignificant 0.8138622 0.884508 -0.04106796 15 0.7460704 0.875976 -0.1299058 1.0000e+00 3.3998e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9957e-01 1.3882e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0875754 7.1159e-03 weaklyHypometh 0.5473734 insignificant 0.7877095 0.8844548 -0.0787807 15 0.7419580 0.870339 -0.1283808 1.0000e+00 2.0498e-04 weaklyHypometh 1.0000e+00 6.6122e-03 weaklyHypometh 1.0000e+00 1.6565e-02 weaklyHypometh 1.0000e+00 3.7647e-01 insignificant -0.1058612 8.9619e-03 weaklyHypometh 3.3192e-01 insignificant chr5 143549050 143550050 21889 YIPF5 A,ENSG00000145817 0.8810172 250 6 0.6874843 189 8 0.8350559 122 6 0.8319016 223 6 0.7451712 170 6 0.770286 279 6 0.6397226 213 6 0.5118777 109 6 0.6971211 140 8 0.8048397 148 6 0.8086409 243 7 0.6597222 96 6 0.8383268 244 6 0.8466015 79 6 0.7738490 171 6 0.7252400 119 6 0.6669749 481 5 0.8044447 263 8 0.66026316 77 6 0.7555088 235 6 0.723810 66 7 0.7441621 82 5 0.788563 213 6 0.8954275 73 3 0.757440 51 5 0.7894306 131 6 0.925893 76 3 0.859938 65 4 0.7997449 130 6 0.8303093 153 8 0.8137766 150 8 0.8413009 264 6 0.6864937 129 6 0.8296875 133 6 0.703153 137 5 0.8333333 28 4 0.891681 104 6 0.7757668 145 8 0.8818116 223 6 0.820609 290 6 0.8383058 260 6 0.9138169 246 6 0.851578 257 6 0.8145608 0.7399321 0.7747384 0.8183043 0.79033103 0.765156 0.7520790 0.6945376 0.6996721 0.8087881 0.8044985 0.7382534 0.8265304 0.8255023 0.9137505 0.89106807 0.5693168 0.8056099 0.71483783 0.7904384 0.7318573 0.8656279 0.833426 0.8305099 0.7130996 0.7383685 0.7983395 0.9070271 0.76812125 0.7848654 0.8031312 0.7940047 0.71948120 0.7658210 0.6385878 0.6325778 0.826079 0.7728909 0.8504253 0.7870935 0.8086543 0.9062273 0.823517 4 0.7733056 0.8046768 -0.02816860 6 0.756280 0.798394 -0.0421142 0.9547451 3.7197e-02 weaklyHypometh 1 1.0000e+00 insignificant 0.869346 1.5380e-03 weaklyHypometh 1 0.637417 insignificant -0.0669472 0.018247 weaklyHypometh 1 insignificant 0.7733056 0.7411243 0.03222451 6 0.756280 0.7579913 -0.00171131 5.3782e-02 5.3939e-01 insignificant 7.4697e-01 1.0000e+00 insignificant 6.1404e-01 1.1412e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0394834 3.3207e-01 insignificant 1.0000e+00 insignificant 0.7733056 0.850313 -6.9600e-02 6 0.756280 0.862998 -0.1067182 9.8004e-01 2.1260e-03 weaklyHypometh 1.0000e+00 2.6575e-01 insignificant 9.9661e-01 2.4337e-04 weaklyHypometh 1.0000e+00 0.06226384 weaklyHypometh -0.1140220 4.3331e-04 weaklyHypometh 0.05416422 weaklyHypometh 0.804677 0.7411243 0.06170387 6 0.798394 0.7579913 0.0404029 1.0113e-02 7.6018e-01 weaklyHypermeth 1.6855e-01 1.0000e+00 insignificant 2.0058e-01 5.3220e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0274638 4.8031e-01 insignificant 1.0000e+00 insignificant 0.8046768 0.850313 -0.03702219 6 0.7983942 0.862998 -0.0646040 9.5609e-01 3.3172e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 8.3329e-01 1.9025e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0470748 7.2754e-02 insignificant 1.0000000 insignificant 0.7411243 0.8503135 -0.0983618 6 0.7579913 0.862998 -0.1050069 9.6364e-01 3.9257e-03 weaklyHypometh 1.0000e+00 7.8514e-02 weaklyHypometh 8.7717e-01 8.4481e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0745386 8.0133e-02 insignificant 1.0000e+00 insignificant chr5 144918250 144919250 21904 A,ENSG00000213487 0.8590069 303 7 0.7570580 167 7 0.5974068 133 7 0.8012101 172 7 0.8070887 57 7 0.726190 361 7 0.7787415 74 5 0.7981821 120 7 0.7875458 64 5 0.8411722 94 7 0.7884651 266 7 0.8137363 51 4 0.8698622 125 7 0.8785714 25 4 0.7984333 108 7 0.7979437 42 4 0.7629419 50 4 0.6518519 139 7 0.84563215 137 7 0.8105882 282 7 0.833333 30 5 0.8966450 50 6 0.840898 147 7 0.7664811 77 6 0.809524 47 5 0.8515809 221 7 0.895623 114 7 0.835752 58 5 0.7992769 106 7 0.8669204 220 7 0.8476743 183 7 0.7700026 365 7 0.7894210 105 7 0.6442875 92 7 0.715421 113 5 0.8095238 34 4 0.491774 83 7 0.7872112 192 7 0.8544083 252 7 0.881731 268 7 0.8628477 239 7 0.8316327 242 7 0.853867 298 7 0.8816138 0.8225402 0.6770675 0.8553975 0.77507304 0.851352 0.8218743 0.8541459 0.8580270 0.8876595 0.8123855 0.8095491 0.8840080 0.9054689 0.8666183 0.79474548 0.8596790 0.8541872 0.88444123 0.8604585 0.8582923 0.8637110 0.885039 0.8366153 0.8973727 0.8790089 0.9225755 0.8824056 0.84973729 0.9089091 0.8893607 0.8912944 0.83756438 0.7175926 0.7944217 0.8710025 0.766747 0.8395737 0.8826662 0.9199914 0.9059194 0.8848718 0.867663 4 0.8322487 0.8714462 -0.04871839 7 0.706879 0.825183 -0.1183042 0.9992370 6.3936e-04 weaklyHypometh 1 3.1968e-01 insignificant 0.987380 9.5707e-03 weaklyHypometh 1 1.000000 insignificant -0.0458946 0.025827 weaklyHypometh 1 insignificant 0.8317690 0.7786753 0.03982478 7 0.686191 0.5277598 0.15843112 2.9103e-02 9.9626e-01 weaklyHypermeth 4.3437e-01 1.0000e+00 insignificant 1.0192e-01 9.9905e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0823084 1.6460e-01 insignificant 1.0000e+00 insignificant 0.8329710 0.901463 -5.0857e-02 7 0.801701 0.858550 -0.0568488 9.9986e-01 4.4339e-03 weaklyHypometh 1.0000e+00 4.0308e-01 insignificant 9.9901e-01 8.3220e-03 weaklyHypometh 1.0000e+00 0.64015655 insignificant -0.0683159 6.3965e-04 weaklyHypometh 0.06602471 weaklyHypometh 0.871446 0.7799353 0.08744122 7 0.825183 0.5863998 0.2387832 5.2289e-05 1.0000e+00 weaklyHypermeth 1.4525e-03 1.0000e+00 weaklyHypermeth 1.4774e-02 1.0000e+00 weaklyHypermeth 2.8968e-01 1.0000e+00 insignificant 0.1282029 4.8883e-02 weaklyHypermeth 1.0000e+00 insignificant 0.8717472 0.901463 -0.00434945 7 0.8466638 0.858550 -0.0118863 4.9388e-01 4.0166e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.1471e-01 6.2124e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0224213 1.4750e-01 insignificant 1.0000000 insignificant 0.7824675 0.9014627 -0.0919921 7 0.7539426 0.858550 -0.1046075 9.9991e-01 6.6557e-04 weaklyHypometh 1.0000e+00 1.7988e-02 weaklyHypometh 9.9990e-01 9.2318e-03 weaklyHypometh 1.0000e+00 2.5644e-01 insignificant -0.1506243 2.8489e-02 weaklyHypometh 6.9978e-01 insignificant chr5 146763450 146764450 21942 STK32A A,ENSG00000169302 0.8800000 66 3 0.8290956 316 5 0.8500000 98 5 0.9750000 29 3 0.9501188 128 5 0.934806 207 5 0.9226928 237 5 0.9471537 175 5 0.9179221 86 5 1.0000000 46 3 0.9119998 393 5 1.0000000 38 3 0.9800000 38 3 0.9298246 57 3 0.9684211 59 3 1.0000000 21 3 NA 0 0 0.9692308 44 3 0.98461538 42 5 0.9240390 131 5 0.835084 55 3 0.9523810 19 3 0.869028 120 5 0.9733333 63 4 1.000000 8 0 0.9602513 376 5 0.859034 65 5 0.939560 42 3 0.8214286 37 5 0.9568534 295 5 0.9603562 319 5 0.9633748 200 5 0.0080000 187 5 0.0000000 62 3 0.000000 152 3 0.0000000 3 0 0.000000 215 5 0.0824420 243 5 0.9444905 239 5 0.932753 148 5 1.0000000 49 3 1.0000000 14 0 0.989474 63 3 0.8098684 0.8762654 0.8872180 0.9654605 0.93290963 0.908431 0.9364139 0.9469234 0.9190134 1.0000000 0.9081209 1.0000000 0.9723684 0.9292208 0.9452909 0.99847285 NA 0.9453441 0.99898785 0.9458343 0.8052715 0.9470854 0.852632 0.9982456 1.0000000 0.9457698 0.8587600 0.8982794 0.91259398 0.9499321 0.9709950 0.9661797 0.01368421 0.0000000 0.0000000 0.0000000 0.000000 0.1224247 0.9412388 0.9391696 1.0000000 1.0000000 0.985457 2 0.9185889 0.9387117 -0.01959933 5 0.916469 0.939873 -0.0234032 0.9933864 7.2893e-02 insignificant 1 1.0000e+00 insignificant 0.343566 9.1777e-01 insignificant 1 1.000000 insignificant 0.0165615 0.434576 lowCoverage 1 lowCoverage 0.9185889 0.0324826 0.88796694 5 0.916469 0.0232221 0.89324730 1.7018e-85 1.0000e+00 hypermethylated 1.7018e-82 1.0000e+00 hypermethylated 3.7178e-14 1.0000e+00 hypermethylated 1.2393e-11 1.0000e+00 hypermethylated 0.9257116 3.5352e-16 lowCoverage 1.7676e-13 lowCoverage 0.9185889 0.953216 -3.3888e-02 5 0.916469 0.950376 -0.0339067 9.8918e-01 9.3582e-03 weaklyHypometh 1.0000e+00 6.9808e-01 insignificant 9.9861e-01 2.6721e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant -0.0325581 1.0693e-01 lowCoverage 1.00000000 lowCoverage 0.938712 0.0324826 0.90710972 5 0.939873 0.0232221 0.9166505 1.9000e-63 1.0000e+00 hypermethylated 1.9000e-60 1.0000e+00 hypermethylated 3.4576e-12 1.0000e+00 hypermethylated 1.1525e-09 1.0000e+00 hypermethylated 0.9091500 1.9973e-17 lowCoverage 1.9973e-14 lowCoverage 0.9387117 0.953216 -0.01571048 5 0.9398726 0.950376 -0.0105035 7.1519e-01 2.6776e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9913e-01 2.0453e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant -0.0491197 4.8216e-02 lowCoverage 1.0000000 lowCoverage 0.0324826 0.9532164 -0.9187974 5 0.0232221 0.950376 -0.9271540 1.0000e+00 8.3344e-44 hypomethylated 1.0000e+00 8.3344e-41 hypomethylated 1.0000e+00 5.5837e-09 hypomethylated 1.0000e+00 1.8612e-06 hypomethylated -0.9582697 6.4193e-12 lowCoverage 6.4193e-09 lowCoverage chr5 146862350 146863350 21947 DPYSL3 A,ENSG00000113657 0.7296183 144 6 0.5302965 121 6 0.5854167 31 3 0.6228022 98 6 0.8087146 70 5 0.753914 75 5 0.7723787 62 6 0.6709596 57 5 0.6071429 45 6 0.6883838 30 2 0.7191415 92 5 0.8638889 26 4 0.7857143 83 6 0.6783560 60 4 0.5435897 32 4 0.6722222 24 1 0.2500000 8 1 0.8159129 167 6 0.77222222 42 5 0.7722222 24 3 0.920000 19 2 0.8333333 6 0 0.737208 86 6 0.7142857 21 2 0.782738 73 3 0.7154040 42 5 0.677381 46 5 0.952381 15 0 0.7704248 70 4 0.7405303 67 6 0.7210884 59 5 0.7261905 41 4 0.5549451 92 6 0.7261905 75 3 0.759487 63 5 0.8333333 5 0 0.463389 105 5 0.6646825 46 5 0.7842711 131 6 0.778189 116 6 0.7613445 138 6 0.7157967 64 6 0.804487 98 6 0.8261227 0.6002330 0.4151786 0.7923077 0.83543417 0.747835 0.7762706 0.8490260 0.6692177 0.7232143 0.7377285 0.8482143 0.7806122 0.6579670 0.6835502 0.88392857 NA 0.7997771 0.84375000 0.9017857 0.9571429 0.8125742 0.809798 0.8125000 0.7103529 0.8579545 0.6422194 0.9107143 0.80168943 0.6899351 0.8262472 0.7002551 0.63644689 0.7786990 0.8192590 0.7905247 0.584018 0.5994898 0.8035905 0.8676719 0.7750350 0.8570644 0.746051 0 0.7195972 0.7444853 -0.02063976 5 0.751497 0.759854 -0.0083569 0.8849712 3.4767e-01 insignificant 1 1.0000e+00 insignificant 0.992235 2.0242e-01 insignificant 1 1.000000 insignificant -0.0921022 0.026389 lowCoverage 1 lowCoverage 0.7189441 0.6761658 0.06280901 5 0.715997 0.6340808 0.08191585 1.8603e-02 9.5588e-01 weaklyHypermeth 2.9067e-01 1.0000e+00 insignificant 1.0107e-01 9.8576e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0151403 8.1814e-01 lowCoverage 1.0000e+00 lowCoverage 0.7195972 0.793419 -5.8192e-02 6 0.751497 0.704002 0.0474953 9.9406e-01 2.1329e-02 weaklyHypometh 1.0000e+00 9.5422e-01 insignificant 9.4022e-01 2.6907e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant -0.0866728 1.8432e-02 lowCoverage 0.61441380 lowCoverage 0.743542 0.6761658 0.07667522 5 0.725547 0.6340808 0.0914666 7.9318e-04 9.7588e-01 weaklyHypermeth 1.7243e-02 1.0000e+00 weaklyHypermeth 8.8335e-03 9.9749e-01 weaklyHypermeth 1.9386e-01 1.0000e+00 insignificant 0.1072425 1.2262e-01 lowCoverage 1.0000e+00 lowCoverage 0.7444853 0.793419 -0.04771069 5 0.7598539 0.704002 0.0558521 9.7552e-01 2.6449e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.5910e-01 5.7628e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0054294 8.5341e-01 lowCoverage 1.0000000 lowCoverage 0.6761658 0.7948718 -0.1250913 5 0.6340808 0.804573 -0.1704927 9.9933e-01 7.6174e-06 weaklyHypometh 1.0000e+00 3.3119e-04 weaklyHypometh 9.9985e-01 5.7929e-03 weaklyHypometh 1.0000e+00 1.7554e-01 insignificant -0.1018131 1.3154e-01 lowCoverage 1.0000e+00 lowCoverage chr5 148532850 148533850 22002 ABLIM3 ENSG00000173210 0.826805 738 17 0.647996 352 17 0.68926 312 17 0.772428 386 16 0.741309 245 17 0.67425 592 19 0.709154 275 17 0.717187 362 17 0.687175 262 19 0.737182 313 16 0.708198 579 17 0.764708 194 12 0.779565 304 17 0.746570 118 12 0.729120 368 17 0.696065 166 12 0.745509 1019 13 0.751185 393 16 0.702934 409 16 0.73371 511 19 0.795684 140 14 0.742227 145 16 0.785318 342 17 0.705466 127 14 0.799820 144 13 0.754471 536 17 0.729752 193 14 0.624686 132 10 0.781290 363 18 0.761937 586 19 0.710020 416 17 0.764473 653 19 0.6459952 310 17 0.6184591 348 16 0.6529511 331 17 0.6119048 103 10 0.5805267 182 16 0.671619 599 17 0.76689 565 17 0.774469 611 17 0.749754 517 17 0.820335 534 16 0.760152 581 17 0.845838 0.754363 0.700014 0.775862 0.758188 0.738750 0.733131 0.818690 0.738200 0.790412 0.729027 0.810455 0.768218 0.686827 0.763362 0.733041 0.809924 0.785441 0.750214 0.779985 0.818227 0.711072 0.806402 0.731869 0.801815 0.820604 0.772917 0.701884 0.787121 0.783599 0.764525 0.789571 0.6405500 0.675691 0.7574234 0.69907161 0.678326 0.7575712 0.816801 0.827961 0.799504 0.803521 0.796070 8 0.757821 0.772571 -0.01058122 17 0.73674 0.759881 -0.02313852 9.7083e-01 1.0575e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8840e-01 1.0192e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01824591 0.29457990 insignificant 1.00000 insignificant 0.757799 0.699413 0.06288946 17 0.73225 0.639001 0.09325276 2.8350e-12 9.9970e-01 weaklyHypermeth 8.1000e-11 1.0000e+00 weaklyHypermeth 2.3804e-05 9.9979e-01 weaklyHypermeth 6.2643e-04 1.0000e+00 weaklyHypermeth 0.09777324 1.2188e-04 weaklyHypermeth 6.4356e-03 weaklyHypermeth 0.757799 0.800926 -0.0360466 17 0.73225 0.776680 -0.04442570 9.9891e-01 2.3305e-03 weaklyHypometh 1.0000e+00 1.1652e-01 insignificant 9.9921e-01 1.6272e-04 weaklyHypometh 1.0000e+00 2.7120e-02 weaklyHypometh -0.0463035 1.3870e-02 weaklyHypometh 0.36637265 insignificant 0.772679 0.699413 0.0745761 17 0.761363 0.639001 0.1223621 3.0436e-10 1.0000e+00 weaklyHypermeth 9.5111e-09 1.0000e+00 weaklyHypermeth 6.3847e-06 1.0000e+00 weaklyHypermeth 2.4557e-04 1.0000e+00 weaklyHypermeth 0.1160192 3.3779e-05 weaklyHypermeth 2.8150e-03 weaklyHypermeth 0.772679 0.800926 -0.02762497 17 0.761363 0.776680 -0.0153164 9.4568e-01 7.2666e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6636e-01 2.9891e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0280576 1.5784e-01 insignificant 1.000000 insignificant 0.699413 0.800926 -0.0984652 17 0.639001 0.776680 -0.1376785 0.99999992 2.5212e-10 weaklyHypometh 1.000000 1.4007e-08 weaklyHypometh 1.0000000 5.4986e-07 weaklyHypometh 1 4.2297e-05 weaklyHypometh -0.1440768 2.3629e-05 weaklyHypometh 0.0047258 weaklyHypometh chr5 148565850 148566850 22004 ABLIM3 ENSG00000173210 0.839572 285 5 0.816626 310 5 0.78100 156 5 0.885385 158 5 0.791569 92 5 0.89104 299 5 0.769733 160 5 0.887478 196 5 0.830450 155 5 0.909812 163 5 0.876098 226 5 0.793671 68 5 0.904378 204 5 0.944444 32 3 0.830226 152 5 0.716667 28 3 0.683474 87 5 0.781720 198 5 0.888715 148 5 0.86404 259 5 0.847619 49 3 0.816217 89 5 0.790127 146 5 0.862322 109 5 0.921587 89 5 0.939046 268 5 0.725162 84 5 0.831818 64 3 0.852819 257 5 0.915060 304 5 0.914645 329 5 0.881850 299 5 0.6010091 304 5 0.6500744 140 5 1.0000000 70 3 0.5087420 93 5 0.5661964 125 5 0.500152 314 5 0.86661 312 5 0.879521 276 5 0.839041 288 5 0.836395 228 5 0.861231 222 5 0.843135 0.824681 0.780062 0.891519 0.804048 0.900403 0.795448 0.892258 0.834101 0.905689 0.856302 0.809952 0.909334 0.890492 0.833877 0.732072 0.707295 0.758955 0.887138 0.868690 0.877000 0.807736 0.781971 0.836422 0.916499 0.937428 0.708786 0.871786 0.858169 0.897956 0.915089 0.888465 0.6498540 0.693842 0.8963825 0.51950690 0.606473 0.5427076 0.865768 0.881498 0.830740 0.826678 0.872713 5 0.844491 0.874940 -0.03158808 5 0.86708 0.894381 -0.02729781 9.9576e-01 6.4735e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9947e-01 5.4709e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02388392 0.31882660 lowCoverage 1.00000 lowCoverage 0.844398 0.554493 0.26641703 5 0.84050 0.607585 0.23291500 3.3847e-13 9.9829e-01 hypermethylated 1.0918e-11 1.0000e+00 hypermethylated 1.3899e-03 9.8080e-01 weaklyHypermeth 2.2418e-02 1.0000e+00 weaklyHypermeth 0.19660975 4.8615e-02 lowCoverage 5.2916e-01 lowCoverage 0.844398 0.848416 -0.0096810 5 0.84050 0.855998 -0.01549767 2.6096e-01 1.6608e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.2333e-01 7.2058e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0222550 2.1016e-01 lowCoverage 1.00000000 lowCoverage 0.874820 0.554493 0.3137261 5 0.873258 0.607585 0.2656724 2.6544e-11 9.9782e-01 hypermethylated 9.8309e-10 1.0000e+00 hypermethylated 8.2565e-04 9.9959e-01 hypermethylated 1.5290e-02 1.0000e+00 hypermethylated 0.2204937 3.2850e-02 lowCoverage 4.3593e-01 lowCoverage 0.874820 0.848416 0.01476347 5 0.873258 0.855998 0.0172597 2.3147e-01 4.4219e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.6974e-01 5.2153e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0016289 9.3540e-01 lowCoverage 1.000000 lowCoverage 0.554493 0.848416 -0.2838716 5 0.607585 0.855998 -0.2484127 0.96955102 1.7143e-05 hypomethylated 1.000000 4.1813e-04 hypomethylated 0.9085555 1.7766e-02 weaklyHypometh 1 2.3376e-01 insignificant -0.2188648 3.4400e-02 lowCoverage 0.5172594 lowCoverage chr5 148790950 148791950 22015 MIR145 ENSG00000207700 0.661339 127 5 0.733333 51 3 0.76389 46 3 0.791068 93 6 0.806318 36 3 0.74737 244 6 0.684524 44 2 0.950884 44 3 0.405229 39 1 0.585000 29 1 0.667054 123 6 0.948718 15 1 0.660920 43 3 0.944444 8 1 0.814815 37 1 0.875000 8 1 0.575000 21 1 0.747253 89 5 0.670238 58 4 0.74218 135 6 0.553333 22 1 0.689103 26 1 0.802203 67 4 0.929167 38 3 0.805556 41 1 0.836508 133 6 0.824176 33 3 0.772727 14 1 0.887302 48 3 0.709896 109 6 0.743037 136 6 0.754966 184 6 0.6321160 60 3 0.5528846 38 1 0.8038462 92 6 0.4791667 21 1 0.5321839 56 3 0.736099 112 6 0.75094 87 4 0.659398 87 4 0.799769 107 4 0.642424 48 4 0.800564 118 6 0.911389 0.800000 0.998756 0.904887 0.935138 0.855351 0.857676 0.887999 0.860989 0.822388 0.918616 0.850746 0.966547 0.838308 0.892206 0.872760 0.799999 0.848614 0.961087 0.892655 0.917910 0.845771 0.899640 0.945896 0.838308 0.972281 0.776119 0.816147 0.965529 0.973818 0.887684 0.790931 0.7149029 0.925373 0.7388060 0.91726110 0.830245 0.8309750 0.908476 0.976140 0.941128 0.966953 0.872761 1 0.805426 0.801410 -0.02322663 6 0.72749 0.725051 0.00244201 5.0719e-01 1.8832e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.5127e-01 1.6596e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03693575 0.38167037 lowCoverage 1.00000 lowCoverage 0.805426 0.759894 0.03418749 6 0.72749 0.671670 0.05582376 2.1470e-03 1.2124e-01 weaklyHypermeth 1.9343e-02 1.0000e+00 weaklyHypermeth 1.5941e-02 4.2203e-01 weaklyHypermeth 1.7277e-01 1.0000e+00 insignificant 0.11601259 8.4782e-02 lowCoverage 8.3943e-01 lowCoverage 0.805772 0.803132 -0.0311769 4 0.72428 0.791711 -0.06743262 9.5579e-01 1.5002e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.5862e-01 2.3615e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0081091 8.6162e-01 lowCoverage 1.00000000 lowCoverage 0.801410 0.759894 0.0570410 6 0.725051 0.671670 0.0533817 4.6992e-02 7.5266e-01 weaklyHypermeth 3.3387e-01 1.0000e+00 insignificant 3.4702e-02 9.0779e-01 weaklyHypermeth 3.1195e-01 1.0000e+00 insignificant 0.1529483 3.0970e-02 lowCoverage 4.2424e-01 lowCoverage 0.802120 0.803132 -0.01628795 4 0.757202 0.791711 -0.0345092 6.3196e-01 3.4445e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 6.7168e-01 7.5363e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0450448 3.3251e-01 lowCoverage 1.000000 lowCoverage 0.763926 0.803132 -0.0913140 4 0.767622 0.791711 -0.0240883 0.50746030 8.1409e-02 lowCoverage 1.000000 5.6534e-01 lowCoverage 0.9167025 9.0020e-02 lowCoverage 1 7.9036e-01 lowCoverage -0.1079035 1.1649e-01 lowCoverage 1.0000000 lowCoverage chr5 148805850 148806850 22019 MIR145 ENSG00000207700 0.658562 147 6 0.641057 147 6 0.58961 75 4 0.735335 101 6 0.561508 55 6 0.78436 219 6 0.636806 85 5 0.678282 97 6 0.544976 65 6 0.666847 55 6 0.634332 223 6 0.392735 44 3 0.751935 112 6 0.750000 27 3 0.720779 71 4 0.822222 43 3 0.431818 29 3 0.616239 104 6 0.751323 158 6 0.77176 182 5 0.708442 50 4 0.734839 54 6 0.734478 77 6 0.790476 58 6 0.743056 41 6 0.721905 186 6 0.666340 61 6 0.750000 37 3 0.715708 134 6 0.743321 172 6 0.688791 192 6 0.688695 226 6 0.5301686 124 6 0.6111111 90 4 0.5124139 95 6 0.5757576 40 4 0.5058216 74 6 0.686323 209 6 0.55794 147 6 0.601866 172 6 0.792282 112 6 0.631703 132 6 0.676659 136 6 0.656549 0.649569 0.677956 0.723616 0.654135 0.725488 0.654030 0.764784 0.643640 0.679455 0.737280 0.593016 0.740086 0.693397 0.710827 0.765913 0.595711 0.637224 0.786371 0.751773 0.621108 0.768213 0.712353 0.759387 0.691024 0.718380 0.678978 0.712644 0.727032 0.715094 0.671687 0.691132 0.5680887 0.564717 0.5004160 0.65256008 0.624858 0.7237172 0.690613 0.701741 0.791405 0.674515 0.776605 3 0.739578 0.750000 -0.00769920 6 0.62930 0.751148 -0.12184858 8.9349e-01 1.3876e-02 weaklyHypometh 1.0000e+00 6.3071e-01 insignificant 9.4262e-01 3.7686e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.06681274 0.02113651 weaklyHypometh 1.00000 insignificant 0.739578 0.533228 0.19492233 6 0.62930 0.581427 0.04787326 5.8701e-07 8.3947e-01 weaklyHypermeth 9.7835e-06 1.0000e+00 weaklyHypermeth 7.8220e-03 6.7358e-01 weaklyHypermeth 9.7775e-02 1.0000e+00 weaklyHypermeth 0.08675881 3.9193e-02 weaklyHypermeth 4.8585e-01 insignificant 0.739578 0.739628 -0.0240012 6 0.62930 0.618544 0.01075571 8.3683e-01 2.0072e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.8655e-01 2.0004e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0049352 9.1973e-01 insignificant 1.00000000 insignificant 0.750000 0.533228 0.2042026 6 0.751148 0.581427 0.1697218 1.9668e-08 9.4313e-01 hypermethylated 4.3706e-07 1.0000e+00 hypermethylated 3.3515e-03 8.3955e-01 weaklyHypermeth 5.2367e-02 1.0000e+00 weaklyHypermeth 0.1535716 2.0153e-03 weaklyHypermeth 6.5009e-02 weaklyHypermeth 0.750000 0.739628 -0.01603081 6 0.751148 0.618544 0.1326043 8.1535e-01 1.7013e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.7868e-01 5.1961e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0717480 1.4882e-01 insignificant 1.000000 insignificant 0.533228 0.739628 -0.2099817 6 0.581427 0.618544 -0.0371175 0.73791108 1.7878e-04 hypomethylated 1.000000 3.2506e-03 hypomethylated 0.7645282 9.7820e-02 insignificant 1 8.4328e-01 insignificant -0.0818236 1.3667e-01 insignificant 1.0000000 insignificant chr5 148847250 148848250 22027 MIR145 ENSG00000207700 0.764965 178 7 0.620253 227 7 0.74706 198 7 0.784412 118 6 0.828931 145 7 0.69125 239 7 0.535038 147 6 0.758511 160 7 0.785760 161 7 0.734050 143 6 0.770813 291 7 0.741314 110 6 0.719237 157 7 1.000000 19 1 0.701018 236 7 0.826847 148 5 0.772539 77 5 0.679074 102 6 0.783967 244 7 0.70780 211 7 0.808723 97 7 0.798319 81 5 0.681908 136 7 0.747234 109 7 0.652778 48 6 0.750125 190 7 0.711671 119 7 0.697807 106 6 0.666191 143 6 0.633234 166 7 0.717019 148 7 0.639986 275 6 0.5851164 188 7 0.6609739 158 7 0.7401055 211 6 0.7175926 38 4 0.5707839 169 6 0.655810 157 7 0.76699 178 7 0.735351 139 7 0.718694 142 6 0.791246 127 6 0.809524 101 6 0.654528 0.628075 0.689742 0.615145 0.765728 0.594444 0.634069 0.668778 0.700963 0.635833 0.698455 0.777144 0.627161 0.683169 0.718876 0.732453 0.694143 0.522626 0.726245 0.605862 0.710713 0.664221 0.587888 0.586988 0.546425 0.661722 0.629746 0.675486 0.553458 0.658585 0.619004 0.613268 0.5852552 0.586214 0.6720131 0.59557731 0.637393 0.5506654 0.624839 0.619041 0.585135 0.671974 0.747220 5 0.713682 0.701483 0.03155036 7 0.65830 0.721984 -0.06368910 4.6477e-02 8.0303e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 7.3128e-02 9.5283e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03889274 0.15080401 insignificant 1.00000 insignificant 0.713682 0.650380 0.05842561 7 0.65830 0.546022 0.11227369 3.7827e-06 9.3680e-01 weaklyHypermeth 5.7314e-05 1.0000e+00 weaklyHypermeth 2.0006e-03 9.7173e-01 weaklyHypermeth 2.8993e-02 1.0000e+00 weaklyHypermeth 0.09257883 2.1113e-02 weaklyHypermeth 3.1048e-01 insignificant 0.714935 0.707424 0.0144591 6 0.76067 0.755993 0.00467270 1.7583e-01 4.0944e-02 inconclusive 1.0000e+00 7.5822e-01 insignificant 6.1558e-01 1.7406e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0167183 5.3500e-01 insignificant 1.00000000 insignificant 0.701483 0.650380 0.0217315 7 0.721984 0.546022 0.1759628 4.9425e-02 8.4739e-01 weaklyHypermeth 3.4563e-01 1.0000e+00 insignificant 1.4895e-01 8.9622e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0536861 1.3372e-01 insignificant 1.0000e+00 insignificant 0.702233 0.707424 -0.02295451 6 0.728266 0.755993 -0.0277270 9.1184e-01 2.0212e-02 weaklyHypometh 1.0000e+00 6.7373e-01 insignificant 9.9071e-01 4.1140e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0556110 3.8439e-02 weaklyHypometh 0.970640 insignificant 0.652505 0.707424 -0.0374759 6 0.702028 0.755993 -0.0539649 0.92316614 4.8196e-03 weaklyHypometh 1.000000 5.5398e-02 weaklyHypometh 0.9684045 6.3348e-02 insignificant 1 6.0911e-01 insignificant -0.1092971 9.8999e-03 weaklyHypometh 0.2438233 insignificant chr5 148921850 148922850 22030 CSNK1A1 ENSG00000113712 0.759926 309 10 0.704766 228 10 0.58450 145 10 0.792453 185 10 0.802513 110 10 0.76223 290 10 0.672258 151 8 0.776623 196 10 0.512127 109 7 0.771270 128 10 0.733770 295 10 0.651786 101 9 0.795546 161 10 0.766667 57 6 0.777509 220 10 0.892857 37 4 0.815810 99 9 0.728293 248 10 0.791579 143 10 0.75083 295 10 0.726153 70 4 0.706130 100 10 0.740215 147 10 0.781445 124 10 0.799881 96 7 0.796228 222 10 0.707387 107 9 0.620940 74 5 0.807232 127 10 0.762440 252 10 0.673440 224 10 0.695781 445 10 0.5899563 186 10 0.6921147 148 10 0.6251020 162 9 0.7495911 62 8 0.7334641 89 9 0.735299 213 10 0.80978 256 10 0.801500 257 10 0.761417 222 10 0.778381 213 10 0.664346 356 10 0.799136 0.707644 0.651270 0.813458 0.770491 0.772136 0.694427 0.783095 0.624527 0.771768 0.746308 0.709283 0.761313 0.800027 0.811292 0.769294 0.809309 0.803807 0.796748 0.784869 0.861396 0.745294 0.767267 0.709581 0.799166 0.780373 0.763756 0.682441 0.805334 0.763416 0.718841 0.744411 0.6648116 0.688166 0.6531825 0.76185333 0.746105 0.7646161 0.817920 0.798818 0.754674 0.797338 0.820079 6 0.762475 0.756036 0.00292297 10 0.74448 0.703342 0.04114208 8.5060e-02 6.6917e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.1468e-01 4.4712e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00739265 0.77104741 insignificant 1.00000 insignificant 0.762136 0.689535 0.05606159 10 0.70517 0.639264 0.06590972 1.2779e-05 9.6673e-01 weaklyHypermeth 1.6596e-04 1.0000e+00 weaklyHypermeth 9.0044e-03 9.7675e-01 weaklyHypermeth 1.0981e-01 1.0000e+00 insignificant 0.05457740 1.2662e-01 insignificant 1.0000e+00 insignificant 0.762475 0.776074 -0.0300267 10 0.74448 0.660045 0.08443857 9.9441e-01 1.6800e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.2278e-01 1.6442e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0209206 5.3344e-01 insignificant 1.00000000 insignificant 0.756332 0.689535 0.0598147 10 0.702574 0.639264 0.0633099 6.8495e-04 8.8087e-01 weaklyHypermeth 7.6106e-03 1.0000e+00 weaklyHypermeth 1.2513e-02 9.8073e-01 weaklyHypermeth 1.4219e-01 1.0000e+00 insignificant 0.0471847 1.6947e-01 insignificant 1.0000e+00 insignificant 0.756036 0.776074 -0.03412002 10 0.703342 0.660045 0.0432965 9.0338e-01 7.7219e-03 weaklyHypometh 1.0000e+00 3.6468e-01 insignificant 8.8572e-01 1.2608e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0283132 3.8856e-01 insignificant 1.000000 insignificant 0.689535 0.777266 -0.0923620 10 0.639264 0.761590 -0.1223268 0.99999770 1.7863e-06 weaklyHypometh 1.000000 5.2537e-05 weaklyHypometh 0.9999923 2.5195e-03 weaklyHypometh 1 5.1417e-02 weaklyHypometh -0.0754980 7.5027e-02 insignificant 0.7502707 insignificant chr5 148922050 148923050 22031 CSNK1A1 ENSG00000113712 0.759926 309 10 0.704766 228 10 0.58450 145 10 0.792453 185 10 0.802513 110 10 0.76223 290 10 0.672258 151 8 0.776623 196 10 0.512127 109 7 0.771270 128 10 0.733770 295 10 0.651786 101 9 0.795546 161 10 0.766667 57 6 0.777509 220 10 0.892857 37 4 0.815810 99 9 0.728293 248 10 0.791579 143 10 0.75083 295 10 0.726153 70 4 0.706130 100 10 0.740215 147 10 0.781445 124 10 0.799881 96 7 0.796228 222 10 0.707387 107 9 0.620940 74 5 0.807232 127 10 0.762440 252 10 0.673440 224 10 0.695781 445 10 0.5899563 186 10 0.6921147 148 10 0.6251020 162 9 0.7495911 62 8 0.7334641 89 9 0.735299 213 10 0.80978 256 10 0.801500 257 10 0.761417 222 10 0.778381 213 10 0.664346 356 10 0.799136 0.707644 0.651270 0.813458 0.770491 0.772136 0.694427 0.783095 0.624527 0.771768 0.746308 0.709283 0.761313 0.800027 0.811292 0.769294 0.809309 0.803807 0.796748 0.784869 0.861396 0.745294 0.767267 0.709581 0.799166 0.780373 0.763756 0.682441 0.805334 0.763416 0.718841 0.744411 0.6648116 0.688166 0.6531825 0.76185333 0.746105 0.7646161 0.817920 0.798818 0.754674 0.797338 0.820079 6 0.762475 0.756036 0.00292297 10 0.74448 0.703342 0.04114208 8.5060e-02 6.6917e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.1468e-01 4.4712e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00739265 0.77104741 insignificant 1.00000 insignificant 0.762136 0.689535 0.05606159 10 0.70517 0.639264 0.06590972 1.2779e-05 9.6673e-01 weaklyHypermeth 1.6596e-04 1.0000e+00 weaklyHypermeth 9.0044e-03 9.7675e-01 weaklyHypermeth 1.0981e-01 1.0000e+00 insignificant 0.05457740 1.2662e-01 insignificant 1.0000e+00 insignificant 0.762475 0.776074 -0.0300267 10 0.74448 0.660045 0.08443857 9.9441e-01 1.6800e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.2278e-01 1.6442e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0209206 5.3344e-01 insignificant 1.00000000 insignificant 0.756332 0.689535 0.0598147 10 0.702574 0.639264 0.0633099 6.8495e-04 8.8087e-01 weaklyHypermeth 7.6106e-03 1.0000e+00 weaklyHypermeth 1.2513e-02 9.8073e-01 weaklyHypermeth 1.4219e-01 1.0000e+00 insignificant 0.0471847 1.6947e-01 insignificant 1.0000e+00 insignificant 0.756036 0.776074 -0.03412002 10 0.703342 0.660045 0.0432965 9.0338e-01 7.7219e-03 weaklyHypometh 1.0000e+00 3.6468e-01 insignificant 8.8572e-01 1.2608e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0283132 3.8856e-01 insignificant 1.000000 insignificant 0.689535 0.777266 -0.0923620 10 0.639264 0.761590 -0.1223268 0.99999770 1.7863e-06 weaklyHypometh 1.000000 5.2537e-05 weaklyHypometh 0.9999923 2.5195e-03 weaklyHypometh 1 5.1417e-02 weaklyHypometh -0.0754980 7.5027e-02 insignificant 0.7502707 insignificant chr5 149474850 149475850 22070 CSF1R ENSG00000182578 0.852039 191 7 0.897704 272 7 0.84973 155 7 0.893076 182 7 0.878168 136 7 0.92786 206 7 0.808303 100 7 0.911644 209 7 0.797202 133 7 0.946900 191 7 0.911937 153 7 0.840861 99 6 0.934417 200 7 0.864583 88 7 0.945299 202 7 0.684329 159 6 NA 0 0 0.865936 182 7 0.864006 160 7 0.93308 103 7 0.914683 63 7 0.952381 68 7 0.801786 70 7 0.853121 110 6 0.950232 165 7 0.935353 272 7 0.670980 117 7 0.792742 85 7 0.896411 131 7 0.957365 265 7 0.848212 228 7 0.917602 164 7 0.6770265 200 7 0.7043531 99 7 0.7500000 15 1 0.6849624 34 2 0.5513264 110 7 0.809316 237 7 0.90930 155 7 0.901102 132 7 0.888206 108 2 0.835661 121 7 0.906780 170 7 0.840756 0.784430 0.825274 0.872885 0.917911 0.853889 0.834973 0.872849 0.789518 0.923460 0.869223 0.829053 0.905904 0.936919 0.924548 0.662829 NA 0.935371 0.847957 0.917789 0.908140 0.924474 0.886910 0.809448 0.900845 0.903651 0.776443 0.870698 0.873003 0.939718 0.910072 0.911371 0.6156720 0.715339 0.8026869 0.61779682 0.609035 0.7439367 0.844298 0.851111 0.830607 0.758961 0.919366 6 0.877283 0.902186 -0.02117440 7 0.79149 0.833594 -0.04210033 9.9739e-01 7.6987e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9148e-01 4.4655e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.00018265 0.99499583 insignificant 1.00000 insignificant 0.877283 0.732374 0.14746288 7 0.79149 0.612832 0.17866163 3.9294e-10 1.0000e+00 weaklyHypermeth 9.8235e-09 1.0000e+00 weaklyHypermeth 1.0531e-04 1.0000e+00 weaklyHypermeth 2.5074e-03 1.0000e+00 weaklyHypermeth 0.17789231 2.4775e-03 weaklyHypermeth 6.9842e-02 weaklyHypermeth 0.877564 0.862974 0.0243627 7 0.87944 0.890202 -0.01076463 2.0580e-01 3.5776e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.7848e-01 3.1027e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0141532 4.8996e-01 insignificant 1.00000000 insignificant 0.902186 0.732374 0.1689482 7 0.833594 0.612832 0.2207620 5.6075e-09 1.0000e+00 weaklyHypermeth 1.6021e-07 1.0000e+00 weaklyHypermeth 5.1035e-05 1.0000e+00 weaklyHypermeth 1.5010e-03 1.0000e+00 weaklyHypermeth 0.1780750 2.0076e-03 weaklyHypermeth 6.5009e-02 weaklyHypermeth 0.904268 0.862974 0.04066910 7 0.926216 0.890202 0.0360135 8.9551e-02 8.8005e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.7286e-01 8.6853e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0139705 6.2822e-01 insignificant 1.000000 insignificant 0.736614 0.862974 -0.1295042 7 0.680925 0.890202 -0.2092776 0.99790866 1.2736e-04 weaklyHypometh 1.000000 2.4030e-03 weaklyHypometh 0.9996328 1.0213e-03 weaklyHypometh 1 2.5531e-02 weaklyHypometh -0.1920455 1.8397e-03 weaklyHypometh 0.0919899 weaklyHypometh chr5 149605350 149606350 22075 SLC6A7 ENSG00000011083 0.702476 179 4 0.785751 332 5 0.73859 255 5 0.911867 146 4 0.855955 199 5 0.88779 373 5 0.845641 322 5 0.855817 250 5 0.871687 195 5 0.849621 227 4 0.856226 379 5 0.761137 99 5 0.755544 234 4 0.828044 192 4 0.778632 291 5 0.741917 156 5 NA 0 0 0.648392 263 4 0.818839 356 4 0.86690 364 4 0.755440 143 5 0.288571 52 2 0.919267 189 5 0.856034 128 5 0.835762 74 4 0.889286 438 5 0.848114 291 5 0.909734 115 5 0.682193 427 4 0.910898 500 5 0.784045 508 5 0.922140 363 5 0.2466096 326 5 0.3883649 316 5 0.6340927 281 5 0.2613636 25 2 0.3504892 219 5 0.305582 550 5 0.56587 295 4 0.415792 265 5 0.388539 190 4 0.352592 284 4 0.624984 159 4 0.875514 0.790246 0.728435 0.886865 0.843740 0.863032 0.828077 0.817066 0.839245 0.872776 0.853866 0.787830 0.822466 0.851751 0.786312 0.689531 NA 0.657444 0.778350 0.839044 0.837166 0.379744 0.896872 0.825052 0.799238 0.887439 0.806917 0.915348 0.783427 0.892171 0.806124 0.898668 0.2659794 0.482124 0.7403443 0.27984402 0.400706 0.3621433 0.643516 0.479809 0.497889 0.353037 0.619780 4 0.808396 0.848203 -0.03966115 5 0.82112 0.848387 -0.02727128 8.2480e-01 3.5934e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 8.8267e-01 1.2967e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00834085 0.87875338 lowCoverage 1.00000 lowCoverage 0.808396 0.374490 0.41614164 5 0.82112 0.380986 0.44013049 1.6626e-28 9.6424e-01 hypermethylated 1.2789e-26 1.0000e+00 hypermethylated 1.8893e-11 9.9735e-01 hypermethylated 1.7176e-09 1.0000e+00 hypermethylated 0.44404754 3.8334e-04 lowCoverage 1.6667e-02 lowCoverage 0.808396 0.442582 0.3510172 4 0.82112 0.447908 0.37320819 1.4223e-22 1.0000e+00 lowCoverage 1.4223e-19 1.0000e+00 lowCoverage 2.2906e-09 1.0000e+00 lowCoverage 7.6353e-07 1.0000e+00 lowCoverage 0.3389083 2.0522e-03 lowCoverage 0.11316351 lowCoverage 0.848203 0.374490 0.4555639 5 0.848387 0.380986 0.4674018 9.0388e-21 9.9963e-01 hypermethylated 6.9529e-19 1.0000e+00 hypermethylated 1.6736e-06 9.9997e-01 hypermethylated 7.6072e-05 1.0000e+00 hypermethylated 0.4357067 9.9679e-05 lowCoverage 7.1199e-03 lowCoverage 0.848203 0.442582 0.40067174 4 0.848387 0.447908 0.4004795 1.3623e-18 1.0000e+00 lowCoverage 6.8115e-16 1.0000e+00 lowCoverage 1.4577e-06 1.0000e+00 lowCoverage 4.8589e-04 1.0000e+00 lowCoverage 0.3305674 8.7173e-04 lowCoverage 0.108967 lowCoverage 0.374490 0.442582 -0.0675411 4 0.380986 0.447908 -0.0669223 0.53148281 1.4273e-01 lowCoverage 1.000000 9.1495e-01 lowCoverage 0.8726948 1.4493e-01 lowCoverage 1 1.0000e+00 lowCoverage -0.1051393 2.1494e-01 lowCoverage 1.0000000 lowCoverage chr5 149787750 149788750 22080 CD74 ENSG00000019582 0.885276 100 5 0.745009 115 5 0.59777 114 3 0.917224 62 3 0.750390 48 5 0.91831 156 5 0.873950 62 5 0.912854 139 5 0.856548 85 5 0.950000 129 5 0.746938 235 5 0.863158 31 3 0.909088 124 5 0.749913 58 3 0.957659 128 3 0.708333 19 3 0.700000 8 1 0.549307 66 2 0.933506 255 3 0.86162 132 5 0.805632 81 4 0.579537 47 2 0.950842 99 4 0.881250 86 5 0.666667 31 2 0.830926 159 5 0.697738 144 4 0.600571 44 3 0.881194 206 5 0.846879 178 5 0.905532 178 5 0.753686 181 5 0.4439464 137 5 0.5702083 116 3 0.7000000 96 3 0.4285714 9 0 0.4473939 101 5 0.724407 187 5 0.88515 45 4 0.638838 103 5 0.752381 49 2 0.483333 34 2 0.806303 79 4 0.873631 0.572062 0.669018 0.918083 0.833110 0.948602 0.819130 0.912698 0.788930 0.950224 0.885080 0.874731 0.834869 0.882275 0.923658 0.420684 0.625687 0.890950 0.900315 0.848009 0.882919 0.698039 0.917741 0.991946 0.993949 0.879814 0.855289 0.889322 0.895399 0.845745 0.879912 0.884543 0.6135091 0.862171 0.7751678 0.44295302 0.465144 0.7537155 0.892702 0.811953 0.752717 0.631879 0.895118 2 0.859632 0.864017 -0.00916143 5 0.67373 0.703482 -0.02975145 5.5519e-01 7.1490e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.2857e-01 5.1960e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03597155 0.42464749 lowCoverage 1.00000 lowCoverage 0.860048 0.633127 0.22687170 5 0.76998 0.477693 0.29228435 2.3403e-14 9.9920e-01 hypermethylated 8.6678e-13 1.0000e+00 hypermethylated 1.0066e-02 9.9575e-01 weaklyHypermeth 1.2128e-01 1.0000e+00 insignificant 0.26692156 2.6950e-03 lowCoverage 7.2838e-02 lowCoverage 0.860048 0.787097 0.0757256 2 0.76998 0.648242 0.12173525 1.5766e-05 9.9174e-01 lowCoverage 1.7517e-03 1.0000e+00 lowCoverage 4.2214e-02 9.9522e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.1061408 2.1341e-01 lowCoverage 1.00000000 lowCoverage 0.865640 0.633127 0.2214429 5 0.746836 0.477693 0.2691432 2.0705e-11 9.9875e-01 hypermethylated 7.9635e-10 1.0000e+00 hypermethylated 7.5502e-03 9.9911e-01 weaklyHypermeth 9.5572e-02 1.0000e+00 weaklyHypermeth 0.2309500 5.9408e-03 lowCoverage 1.3502e-01 lowCoverage 0.865640 0.787097 0.08561565 2 0.746836 0.648242 0.0985941 4.4667e-05 9.9547e-01 lowCoverage 3.4360e-03 1.0000e+00 lowCoverage 1.7872e-02 9.9674e-01 lowCoverage 7.7706e-01 1.0000e+00 lowCoverage 0.0701693 4.0495e-01 lowCoverage 1.000000 lowCoverage 0.633127 0.787097 -0.1387577 2 0.477693 0.648242 -0.1705491 0.98946054 4.2520e-03 lowCoverage 1.000000 5.0151e-02 lowCoverage 0.9944529 1.7912e-01 lowCoverage 1 1.0000e+00 lowCoverage -0.1607807 1.0813e-01 lowCoverage 0.9593240 lowCoverage chr5 149833850 149834850 22083 RPS14 ENSG00000164587 0.620924 146 7 0.680623 222 7 0.63000 119 7 0.687534 210 7 0.565016 137 9 0.72638 222 9 0.578861 173 9 0.625047 132 7 0.482137 122 7 0.740029 104 9 0.650721 235 9 0.608069 93 9 0.624385 156 9 0.637751 118 9 0.574242 139 9 0.709641 85 8 0.650439 519 7 0.635010 200 9 0.483105 85 7 0.56210 166 9 0.839755 40 4 0.709524 47 2 0.575002 139 9 0.574618 141 7 0.704801 94 5 0.590108 188 9 0.553315 95 5 0.652761 91 7 0.707445 114 7 0.713998 216 9 0.666615 172 9 0.669991 196 7 0.5420231 171 9 0.6837104 105 6 0.6952084 110 7 0.5555556 44 6 0.4589146 181 8 0.696219 139 9 0.73998 202 7 0.677155 162 7 0.745774 174 7 0.745889 140 7 0.693175 199 7 0.675515 0.639048 0.580258 0.648239 0.485167 0.678018 0.498476 0.605849 0.496489 0.618262 0.673530 0.517046 0.536208 0.655402 0.556120 0.571641 0.517946 0.556798 0.535472 0.512324 0.769289 0.651983 0.549493 0.524875 0.652168 0.503208 0.448231 0.480336 0.617184 0.551377 0.666419 0.719007 0.5251217 0.586846 0.4649035 0.44226176 0.464350 0.4668973 0.708424 0.613861 0.689415 0.636779 0.619977 2 0.628402 0.601175 -0.01606977 7 0.64234 0.671767 -0.02942736 8.3311e-01 5.6323e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8694e-01 3.3588e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03956060 0.17541202 insignificant 1.00000 insignificant 0.628588 0.578667 0.06857330 8 0.63139 0.698861 -0.06747050 1.9213e-02 9.9679e-01 weaklyHypermeth 1.5128e-01 1.0000e+00 insignificant 7.1265e-02 9.7692e-01 insignificant 5.7012e-01 1.0000e+00 insignificant 0.01832857 6.8942e-01 insignificant 1.0000e+00 insignificant 0.628970 0.696693 -0.0731465 7 0.65275 0.707825 -0.05507550 9.8560e-01 1.7265e-02 weaklyHypometh 1.0000e+00 4.3776e-01 insignificant 9.9938e-01 5.7319e-03 weaklyHypometh 1.0000e+00 2.4922e-01 insignificant -0.0967937 4.4901e-04 weaklyHypometh 0.03873963 weaklyHypometh 0.601700 0.577540 0.0899125 7 0.702534 0.644108 0.0584253 1.7617e-02 9.9583e-01 weaklyHypermeth 1.3763e-01 1.0000e+00 insignificant 2.1715e-02 9.9863e-01 weaklyHypermeth 2.2387e-01 1.0000e+00 insignificant 0.0578892 2.5363e-01 insignificant 1.0000e+00 insignificant 0.600526 0.696693 -0.06067682 7 0.654949 0.707825 -0.0528761 9.8531e-01 8.4480e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8379e-01 1.1355e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0572331 5.6349e-02 insignificant 1.000000 insignificant 0.575839 0.696693 -0.1359168 7 0.565021 0.707825 -0.1428033 0.99999748 5.6863e-04 weaklyHypometh 1.000000 8.8848e-03 weaklyHypometh 0.9999999 8.0974e-04 weaklyHypometh 1 2.0763e-02 weaklyHypometh -0.1151222 3.6951e-02 weaklyHypometh 0.5330546 insignificant chr5 152803150 152804150 22134 NMUR2 ENSG00000132911 0.827002 504 14 0.832319 139 11 0.62192 141 11 0.878673 392 14 0.938022 96 8 0.79607 445 15 0.521959 100 8 0.755244 144 11 0.731854 73 6 0.839471 120 11 0.883244 293 15 0.668821 92 8 0.854016 168 11 NA 0 0 0.727655 127 11 0.831335 83 8 0.686808 105 8 0.858632 458 14 0.857083 202 14 0.80454 361 15 0.738790 48 5 0.826416 145 10 0.867863 320 14 0.730730 91 8 0.894048 60 7 0.824345 318 14 0.826955 138 9 0.840909 52 5 0.812438 122 10 0.769021 251 13 0.789587 244 14 0.811360 486 15 0.6805588 148 11 0.7393976 159 14 0.7039818 326 15 0.8031613 119 9 0.8355615 107 8 0.785861 246 14 0.88860 522 14 0.870559 440 14 0.849190 458 14 0.867956 390 14 0.869880 470 14 0.885531 0.833627 0.716373 0.864187 0.888753 0.835052 0.717192 0.748987 0.680610 0.756435 0.885151 0.877207 0.788893 NA 0.809686 0.850672 0.704373 0.870997 0.849904 0.840344 0.739179 0.864059 0.859314 0.765477 0.874359 0.861524 0.766605 0.874359 0.890913 0.838156 0.839754 0.804790 0.6551199 0.710498 0.6353662 0.81392157 0.868948 0.7851273 0.887706 0.902674 0.897987 0.852639 0.922227 5 0.830693 0.820220 0.01103148 14 0.80278 0.819123 -0.01634636 5.2066e-01 8.7700e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3163e-01 2.2715e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02605610 0.35208097 insignificant 1.00000 insignificant 0.830857 0.744796 0.08942619 15 0.82296 0.754736 0.06822620 7.7744e-05 9.9869e-01 weaklyHypermeth 8.9448e-04 1.0000e+00 weaklyHypermeth 5.5331e-02 8.9501e-01 insignificant 4.6109e-01 1.0000e+00 insignificant 0.02689535 4.4327e-01 insignificant 1.0000e+00 insignificant 0.830982 0.873246 -0.0483142 14 0.83403 0.875514 -0.04148713 9.9929e-01 2.0850e-02 weaklyHypometh 1.0000e+00 4.9643e-01 insignificant 9.9985e-01 8.0283e-03 weaklyHypometh 1.0000e+00 2.9734e-01 insignificant -0.0842555 2.6180e-03 weaklyHypometh 0.11900196 insignificant 0.820062 0.744796 0.0794462 14 0.807065 0.754736 0.0523290 3.4894e-04 9.9725e-01 weaklyHypermeth 4.2554e-03 1.0000e+00 weaklyHypermeth 2.0196e-02 9.7853e-01 weaklyHypermeth 2.1259e-01 1.0000e+00 insignificant 0.0529515 9.6036e-02 insignificant 8.9753e-01 insignificant 0.820062 0.873190 -0.05561007 14 0.807065 0.867215 -0.0601501 9.9999e-01 5.9877e-04 weaklyHypometh 1.0000e+00 6.6530e-02 weaklyHypometh 9.9910e-01 7.3316e-03 weaklyHypometh 1.0000e+00 6.6651e-01 insignificant -0.0581994 1.8337e-03 weaklyHypometh 0.203743 insignificant 0.744796 0.873190 -0.1427629 14 0.754736 0.867215 -0.1124791 0.99999770 1.1316e-07 weaklyHypometh 1.000000 4.1912e-06 weaklyHypometh 0.9999668 2.4170e-04 weaklyHypometh 1 7.5531e-03 weaklyHypometh -0.1111509 5.3694e-03 weaklyHypometh 0.1887867 insignificant chr5 154006350 154007350 22163 HAND1 ENSG00000113196 0.227316 410 12 0.132125 840 12 0.31730 452 12 0.077103 401 12 0.209038 335 12 0.33760 677 12 0.107799 540 12 0.332020 508 12 0.065213 495 12 0.263495 333 11 0.167653 679 12 0.285061 246 12 0.491120 390 12 0.355286 352 12 0.263033 529 12 0.053322 437 12 0.333333 3 0 0.129467 425 12 0.626641 827 12 0.60875 455 12 0.152452 287 12 0.213852 192 9 0.124074 369 12 0.061229 292 12 0.316988 111 10 0.446180 682 12 0.275258 638 12 0.119342 229 13 0.381281 636 12 0.458292 747 12 0.730996 710 12 0.118676 768 12 0.1365399 494 12 0.1644456 357 11 0.2064476 464 9 0.0685606 37 4 0.2317795 439 12 0.130022 829 12 0.23746 466 12 0.142528 454 12 0.311776 289 11 0.268430 334 10 0.244525 386 12 0.157941 0.122056 0.319307 0.077092 0.225846 0.228395 0.110936 0.306591 0.093022 0.296862 0.151278 0.238377 0.485163 0.409137 0.278943 0.057198 NA 0.173113 0.816882 0.611486 0.068660 0.228390 0.101765 0.089472 0.354689 0.529392 0.212078 0.074962 0.277699 0.494986 0.766994 0.082362 0.1299295 0.198004 0.1435096 0.08803169 0.194105 0.1462308 0.188187 0.104705 0.319533 0.183856 0.152606 10 0.282667 0.323493 -0.04020928 12 0.28508 0.265586 0.01949530 9.9999e-01 7.0467e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9166e-01 9.9614e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01408502 0.83655231 insignificant 1.00000 insignificant 0.282861 0.163164 0.12595198 12 0.30794 0.218893 0.08904608 2.8971e-04 9.9903e-01 weaklyHypermeth 3.0178e-03 1.0000e+00 weaklyHypermeth 3.3967e-06 9.9991e-01 weaklyHypermeth 1.2131e-04 1.0000e+00 weaklyHypermeth 0.11283427 1.7380e-02 weaklyHypermeth 2.7541e-01 insignificant 0.282857 0.175921 0.1067746 11 0.27571 0.236098 0.03960771 4.0233e-02 9.9513e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 1.1838e-01 9.5785e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0281888 5.5001e-01 insignificant 1.00000000 insignificant 0.324632 0.163740 0.1694629 12 0.361156 0.245233 0.1159228 5.9440e-04 9.9996e-01 weaklyHypermeth 6.8322e-03 1.0000e+00 weaklyHypermeth 1.9737e-03 9.9979e-01 weaklyHypermeth 3.2894e-02 1.0000e+00 weaklyHypermeth 0.1269193 5.6553e-02 insignificant 6.0163e-01 insignificant 0.324021 0.175739 0.14398111 11 0.290587 0.219234 0.0713533 1.1868e-02 9.9925e-01 weaklyHypermeth 3.6314e-01 1.0000e+00 insignificant 3.8783e-01 9.2691e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0422739 5.1158e-01 insignificant 1.000000 insignificant 0.162711 0.175921 -0.0150449 11 0.154023 0.236098 -0.0820754 0.76620759 6.2093e-03 weaklyHypometh 1.000000 6.8992e-02 weaklyHypometh 0.9997993 7.2844e-04 weaklyHypometh 1 1.9687e-02 weaklyHypometh -0.0846454 4.8186e-02 weaklyHypometh 0.5876336 insignificant chr5 154051450 154052450 22165 MIR1303 ENSG00000221552 0.156547 284 6 0.117463 207 6 0.24347 227 6 0.285558 138 6 0.176600 142 6 0.32224 351 6 0.091632 239 6 0.166622 189 6 0.137329 181 6 0.172552 152 6 0.209815 238 6 0.195492 157 6 0.308365 177 6 NA 0 0 0.274414 229 6 0.172169 177 6 0.343526 146 6 0.326389 154 6 0.126341 170 6 0.28927 412 6 0.320106 46 6 0.332616 131 6 0.257714 164 6 0.449451 57 6 0.370130 66 6 0.239253 241 6 0.362436 96 5 0.202778 52 4 0.189097 120 6 0.220817 206 6 0.331269 206 6 0.097049 389 6 0.6618886 93 6 0.5775505 161 6 0.3750000 13 1 0.5547888 92 6 0.6476371 84 6 0.676962 115 6 0.59101 285 6 0.457151 199 6 0.499252 179 6 0.518433 262 6 0.501599 196 6 0.146719 0.111684 0.229101 0.231627 0.152718 0.310611 0.070656 0.167445 0.141741 0.156935 0.198836 0.186910 0.266183 NA 0.256627 0.161163 0.308474 0.292339 0.109170 0.283035 0.311218 0.267422 0.243647 0.407482 0.303969 0.220089 0.312918 0.216105 0.181267 0.217067 0.330062 0.094468 0.6273823 0.524280 0.5025060 0.47486104 0.668973 0.6561401 0.561976 0.402618 0.449991 0.472008 0.464285 6 0.228463 0.227170 -0.00528594 6 0.22234 0.226626 -0.00428892 6.5664e-01 6.9746e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.7160e-01 7.8100e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.06443892 0.06852293 insignificant 1.00000 insignificant 0.228463 0.600358 -0.39212460 6 0.22234 0.621182 -0.39884507 1.0000e+00 4.2288e-27 hypomethylated 1.0000e+00 2.1144e-24 hypomethylated 1.0000e+00 2.2277e-11 hypomethylated 1.0000e+00 1.1138e-08 hypomethylated -0.36568387 1.9153e-04 hypomethylated 9.5766e-03 hypomethylated 0.228463 0.471008 -0.2909192 6 0.22234 0.519773 -0.29743593 1.0000e+00 1.5594e-25 hypomethylated 1.0000e+00 1.5594e-22 hypomethylated 1.0000e+00 2.6694e-14 hypomethylated 1.0000e+00 2.6694e-11 hypomethylated -0.2968692 7.8383e-07 hypomethylated 0.00039192 hypomethylated 0.227170 0.600358 -0.3881534 6 0.226626 0.621182 -0.3945561 1.0000e+00 9.3260e-17 hypomethylated 1.0000e+00 4.6630e-14 hypomethylated 1.0000e+00 1.0126e-08 hypomethylated 1.0000e+00 5.0630e-06 hypomethylated -0.3012450 3.5467e-04 hypomethylated 1.7734e-02 hypomethylated 0.227170 0.471008 -0.28706529 6 0.226626 0.519773 -0.2931470 1.0000e+00 1.0899e-15 hypomethylated 1.0000e+00 2.7249e-13 hypomethylated 1.0000e+00 4.6730e-09 hypomethylated 1.0000e+00 1.1682e-06 hypomethylated -0.2324302 1.2739e-05 hypomethylated 0.010014 hypomethylated 0.600358 0.471008 0.1123097 6 0.621182 0.519773 0.1014091 0.04175033 9.8225e-01 weaklyHypermeth 1.000000 1.0000e+00 insignificant 0.0287936 9.9771e-01 weaklyHypermeth 1 1.0000e+00 insignificant 0.0688147 2.1785e-01 insignificant 1.0000000 insignificant chr5 154119950 154120950 22167 LARP1 ENSG00000155506 0.822857 59 5 0.707454 71 5 0.50980 82 5 0.713889 34 4 0.850000 39 4 0.80960 115 5 0.650000 23 1 0.774074 90 5 0.811429 76 5 0.752698 71 5 0.827737 186 5 0.648889 20 2 0.888497 102 5 0.837500 19 3 0.787843 48 5 0.576389 31 4 0.583333 7 0 0.768788 44 4 0.928297 103 5 0.79186 132 5 0.882857 55 4 0.781818 45 4 0.783333 34 3 0.675275 36 4 1.000000 21 4 0.774857 119 5 0.816111 65 5 0.966667 13 1 0.798333 53 5 0.805458 118 5 0.827652 202 5 0.835893 150 5 0.9686154 127 5 0.9190476 35 2 0.3448276 40 2 1.0000000 4 0 0.9576087 53 5 0.938741 101 5 0.93500 26 4 0.807143 36 5 0.953846 42 4 0.776667 16 1 0.807044 29 4 0.762946 0.720726 0.510095 0.589193 0.796875 0.782360 0.602865 0.669271 0.761310 0.723239 0.809459 0.564583 0.851806 0.767235 0.730362 0.574527 0.639166 0.776563 0.892884 0.764282 0.814509 0.785511 0.730469 0.652430 0.998126 0.721696 0.801606 0.921875 0.780252 0.775567 0.807306 0.847557 0.9501923 0.941592 0.3566586 0.99946429 0.937755 0.9287260 0.907031 0.782366 0.891827 0.748698 0.833798 1 0.768491 0.793633 -0.02660227 5 0.78363 0.800984 -0.01735148 8.4848e-01 2.3548e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9919e-01 5.8827e-03 weaklyHypometh 1.0000e+00 6.5363e-01 insignificant -0.07697469 0.03749276 lowCoverage 1.00000 lowCoverage 0.768491 0.875000 -0.10969458 5 0.78363 0.913017 -0.12938454 9.9933e-01 8.4630e-05 weaklyHypometh 1.0000e+00 8.4630e-03 weaklyHypometh 9.9997e-01 1.6007e-05 weaklyHypometh 1.0000e+00 3.2014e-03 weaklyHypometh -0.10276024 3.7039e-01 lowCoverage 1.0000e+00 lowCoverage 0.768491 0.852349 -0.0824653 4 0.78363 0.864509 -0.08087677 9.9553e-01 1.2731e-02 lowCoverage 1.0000e+00 3.5364e-01 lowCoverage 9.9885e-01 4.1217e-03 lowCoverage 1.0000e+00 2.4245e-01 lowCoverage -0.1038934 4.6236e-02 lowCoverage 0.79717274 lowCoverage 0.793633 0.875000 -0.0811417 5 0.800984 0.913017 -0.1120331 9.9232e-01 1.1668e-05 weaklyHypometh 1.0000e+00 1.4585e-03 weaklyHypometh 9.9942e-01 2.0780e-03 weaklyHypometh 1.0000e+00 2.5975e-01 insignificant -0.0257856 8.1586e-01 lowCoverage 1.0000e+00 lowCoverage 0.793633 0.852349 -0.05830213 4 0.800984 0.864509 -0.0635253 9.9228e-01 5.3935e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.1823e-01 3.4109e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0269187 5.6181e-01 lowCoverage 1.000000 lowCoverage 0.875000 0.852349 0.0399134 4 0.913017 0.864509 0.0485078 0.10722143 9.3905e-01 lowCoverage 1.000000 1.0000e+00 lowCoverage 0.0680420 9.7805e-01 lowCoverage 1 1.0000e+00 lowCoverage -0.0011331 9.9203e-01 lowCoverage 1.0000000 lowCoverage chr5 156895050 156896050 22194 NIPAL4 ENSG00000172548 0.902122 101 5 0.547034 96 5 0.83953 61 5 0.994118 86 5 0.887626 39 4 0.94645 191 5 0.809524 18 2 0.736591 147 5 0.761111 41 4 0.740385 46 4 0.910656 272 6 0.733333 8 0 0.773148 84 4 0.983333 57 4 0.903453 81 5 0.658730 24 3 1.000000 2 0 0.939234 172 5 0.926163 143 4 0.92150 222 5 1.000000 63 5 0.951509 74 4 0.809848 52 4 0.761905 54 4 0.916667 14 2 0.839286 157 5 0.944972 165 6 0.555556 15 1 0.952812 137 4 0.973574 111 5 0.953869 124 5 0.768521 188 6 0.9318613 130 5 0.7893773 75 4 0.5909091 55 4 1.0000000 5 0 0.6404762 63 5 0.942345 174 5 0.95517 68 4 0.970430 110 5 0.832379 105 4 0.727500 45 4 0.991228 92 5 0.927597 0.596232 0.787786 0.997059 0.839646 0.935175 0.795291 0.950058 0.962222 0.861218 0.934356 0.655556 0.968056 0.991667 0.898366 0.692857 0.949029 0.964337 0.910754 0.891746 1.000000 0.953990 0.843485 0.958333 0.873612 0.972917 0.956254 0.755556 0.947462 0.968541 0.956052 0.881898 0.8821462 0.856227 0.7774858 0.99869792 0.919630 0.9531061 0.936992 0.957213 0.843094 0.795417 0.994737 0 0.901639 0.937608 -0.03742746 5 0.80375 0.818953 -0.01520836 9.4337e-01 6.0075e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3527e-01 1.4342e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02334128 0.61683533 lowCoverage 1.00000 lowCoverage 0.901639 0.884462 0.01082197 5 0.80375 0.716800 0.08694474 3.1125e-01 6.2506e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.3338e-01 3.9046e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02987380 7.0207e-01 lowCoverage 1.0000e+00 lowCoverage 0.903448 0.933333 -0.0272251 4 0.88215 0.942704 -0.06055725 9.7521e-01 5.1166e-02 lowCoverage 1.0000e+00 9.1367e-01 lowCoverage 9.1216e-01 1.1744e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0496399 4.1587e-01 lowCoverage 1.00000000 lowCoverage 0.937608 0.884462 0.0478666 5 0.818953 0.716800 0.1021531 5.6484e-02 8.1805e-01 insignificant 3.8955e-01 1.0000e+00 insignificant 2.6809e-01 6.1342e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0532151 5.1903e-01 lowCoverage 1.0000e+00 lowCoverage 0.941638 0.933333 0.01201713 4 0.927668 0.942704 -0.0150364 4.4300e-01 6.7850e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 6.8339e-01 7.4979e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0262987 6.8404e-01 lowCoverage 1.000000 lowCoverage 0.891566 0.933333 -0.0412717 4 0.836267 0.942704 -0.1064372 0.69573091 3.5302e-01 lowCoverage 1.000000 1.0000e+00 lowCoverage 0.6086204 5.9448e-01 lowCoverage 1 1.0000e+00 lowCoverage -0.0795137 3.7964e-01 lowCoverage 1.0000000 lowCoverage chr5 157212350 157213350 22204 ENSG00000206819 0.700794 151 5 0.549469 180 5 0.61147 63 5 0.825547 100 5 0.715476 72 5 0.80066 141 5 0.703247 62 5 0.710240 112 5 0.689128 88 5 0.731527 91 5 0.789959 231 5 0.955556 24 2 0.727395 100 5 0.779770 62 2 0.808683 96 5 0.600000 21 1 0.888889 18 2 0.765119 99 5 0.792557 135 5 0.68710 112 5 0.600000 23 2 0.784615 30 2 0.835696 92 5 0.607143 38 2 0.920000 25 4 0.775500 171 5 0.829058 83 4 0.733333 31 2 0.744974 150 5 0.757426 128 5 0.634637 171 5 0.664520 162 5 0.7018045 115 5 0.5066667 46 5 0.5397835 99 5 0.3611111 19 3 0.6336977 112 5 0.703159 122 5 0.72870 156 5 0.699193 97 5 0.758095 67 5 0.653846 72 5 0.621032 127 5 0.845983 0.710027 0.778522 0.897034 0.806756 0.894801 0.850535 0.944215 0.829307 0.856080 0.877019 0.916179 0.864579 0.865921 0.842814 0.482456 0.842461 0.894284 0.847721 0.830068 0.855263 0.925776 0.931312 0.773496 0.959649 0.899803 0.862817 0.923977 0.853987 0.886421 0.878199 0.876165 0.7644572 0.574708 0.5066739 0.64973964 0.740168 0.8486521 0.896177 0.879242 0.888471 0.839744 0.876984 2 0.792646 0.821558 -0.03145314 5 0.62190 0.643560 -0.02165757 9.9157e-01 2.9416e-02 weaklyHypometh 1.0000e+00 9.1926e-01 insignificant 9.3390e-01 3.2634e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 0.00105409 0.97666283 lowCoverage 1.00000 lowCoverage 0.793456 0.662768 0.10783055 5 0.74628 0.638285 0.10799711 3.7877e-04 9.9860e-01 weaklyHypermeth 3.8650e-03 1.0000e+00 weaklyHypermeth 4.0856e-04 9.9967e-01 weaklyHypermeth 7.5660e-03 1.0000e+00 weaklyHypermeth 0.16725884 2.5103e-02 lowCoverage 3.4866e-01 lowCoverage 0.792646 0.749518 0.0017946 5 0.62190 0.603876 0.01802639 3.9974e-01 2.0528e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.2943e-01 1.9153e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0494563 1.5914e-01 lowCoverage 1.00000000 lowCoverage 0.823049 0.662768 0.1375484 5 0.772271 0.638285 0.1339862 2.2912e-04 9.9992e-01 weaklyHypermeth 2.8669e-03 1.0000e+00 weaklyHypermeth 3.7955e-04 9.9967e-01 weaklyHypermeth 8.4345e-03 1.0000e+00 weaklyHypermeth 0.1662047 2.6562e-02 lowCoverage 3.7609e-01 lowCoverage 0.821558 0.749518 0.03012927 5 0.643560 0.603876 0.0396840 2.0506e-01 8.1950e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.1963e-01 9.5153e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0484022 2.2180e-01 lowCoverage 1.000000 lowCoverage 0.662768 0.750965 -0.0992946 5 0.638285 0.724651 -0.0863654 0.93950814 5.0832e-02 insignificant 1.000000 3.8803e-01 insignificant 0.9919508 7.1818e-03 weaklyHypometh 1 1.1369e-01 insignificant -0.1178026 8.8311e-02 lowCoverage 0.8465412 lowCoverage chr5 158699450 158700450 22277 IL12B ENSG00000113302 0.698542 218 8 0.664400 174 8 0.46395 113 8 0.815443 171 7 0.687202 85 8 0.79238 261 8 0.692505 76 5 0.722661 123 8 0.621648 100 5 0.577381 80 8 0.767411 248 8 0.723011 43 3 0.755002 116 7 0.780952 26 3 0.792045 106 7 0.693899 65 4 0.765873 39 4 0.764583 121 7 0.836049 141 8 0.72910 167 8 0.575000 35 4 0.699331 69 5 0.770541 152 8 0.595991 119 7 0.723207 61 4 0.724518 179 8 0.618672 48 5 0.700000 44 5 0.765523 125 8 0.642124 208 8 0.746448 168 8 0.646764 314 8 0.6646428 149 8 0.6313738 88 8 0.7637112 187 8 0.7996429 51 4 0.5965278 54 5 0.686208 208 8 0.85409 224 8 0.804838 182 7 0.751348 208 8 0.864546 153 5 0.700720 208 8 0.769263 0.724057 0.623753 0.846617 0.759500 0.836452 0.729973 0.707646 0.714930 0.824171 0.809254 0.764929 0.764648 0.835624 0.832173 0.779458 0.786026 0.822712 0.836769 0.767322 0.725980 0.738789 0.830777 0.738303 0.805119 0.764666 0.709124 0.720756 0.687314 0.747724 0.812205 0.804512 0.6978268 0.642978 0.8188582 0.78122683 0.747113 0.7423856 0.874364 0.876644 0.833132 0.858776 0.771622 3 0.757784 0.756899 0.00509559 8 0.57260 0.683293 -0.11068921 6.8396e-01 3.3611e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.0153e-01 7.5868e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03319207 0.23652971 insignificant 1.00000 insignificant 0.758202 0.716418 0.04379793 8 0.62046 0.701067 -0.08060851 2.3951e-02 9.6906e-01 weaklyHypermeth 1.8145e-01 1.0000e+00 insignificant 2.5962e-02 9.1655e-01 weaklyHypermeth 2.4963e-01 1.0000e+00 insignificant 0.02685089 4.8985e-01 insignificant 1.0000e+00 insignificant 0.758719 0.801026 -0.0490989 8 0.65236 0.802750 -0.15038957 9.6994e-01 5.4494e-03 weaklyHypometh 1.0000e+00 2.2706e-01 insignificant 9.9750e-01 1.6439e-03 weaklyHypometh 1.0000e+00 1.3699e-01 insignificant -0.0779073 6.8262e-02 insignificant 1.00000000 insignificant 0.758256 0.716418 0.0400265 8 0.719952 0.701067 0.0188852 6.7543e-03 8.2538e-01 weaklyHypermeth 5.8227e-02 1.0000e+00 weaklyHypermeth 1.1360e-01 7.4490e-01 insignificant 8.2917e-01 1.0000e+00 insignificant -0.0063412 8.6827e-01 insignificant 1.0000e+00 insignificant 0.758278 0.801026 -0.05696432 8 0.716613 0.802750 -0.0861373 9.7429e-01 1.0635e-02 weaklyHypometh 1.0000e+00 4.4310e-01 insignificant 9.9983e-01 1.0024e-02 weaklyHypometh 1.0000e+00 6.9366e-01 insignificant -0.1110993 1.7833e-02 weaklyHypometh 0.831305 insignificant 0.716033 0.801026 -0.0928753 8 0.667852 0.802750 -0.1348986 0.99793223 2.9333e-06 weaklyHypometh 1.000000 8.1481e-05 weaklyHypometh 0.9999494 1.1717e-03 weaklyHypometh 1 2.7898e-02 weaklyHypometh -0.1047582 4.2808e-02 weaklyHypometh 0.5708227 insignificant chr5 159132650 159133650 22292 IL12B ENSG00000113302 0.091081 906 35 0.077100 842 37 0.11163 1333 37 0.044331 635 25 0.082669 553 35 0.08993 1046 37 0.093679 1054 35 0.061770 644 35 0.074931 702 35 0.070138 547 35 0.069496 1128 35 0.084622 965 35 0.070748 840 35 NA 0 0 0.054762 962 35 0.059310 955 35 0.063306 792 35 0.081075 740 35 0.023605 589 35 0.10770 914 37 0.120374 280 28 0.030070 400 18 0.089246 841 36 0.052788 282 26 0.041496 357 17 0.107483 1110 37 0.069945 495 31 0.037421 281 22 0.087134 560 35 0.059701 1187 37 0.076295 1193 37 0.116925 1113 35 0.0262724 799 37 0.0093407 608 35 0.1399538 811 30 0.0000000 288 17 0.0345147 294 25 0.022075 1033 37 0.11975 1410 33 0.075637 896 37 0.088804 725 24 0.100445 845 19 0.076917 1009 23 0.092913 0.067333 0.115448 0.056937 0.101059 0.087670 0.110921 0.066631 0.096390 0.092949 0.079102 0.107822 0.089588 NA 0.064854 0.065760 0.080120 0.093512 0.024190 0.093963 0.165168 0.046353 0.082798 0.065547 0.061666 0.096290 0.086168 0.032456 0.101206 0.044667 0.067095 0.107820 0.0168779 0.010728 0.1196344 0.00057295 0.033532 0.0174710 0.106908 0.080604 0.064832 0.065105 0.066986 16 0.077228 0.086307 0.00020087 37 0.08827 0.087219 0.00105084 1.6947e-01 1.5410e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.1059e-01 8.8789e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00023639 0.98169980 insignificant 1.00000 insignificant 0.077228 0.049570 0.04658752 37 0.08827 0.039048 0.04922170 4.9124e-27 9.9988e-01 weaklyHypermeth 3.5089e-25 1.0000e+00 weaklyHypermeth 3.7452e-20 1.0000e+00 weaklyHypermeth 6.2420e-18 1.0000e+00 weaklyHypermeth 0.03561678 1.5143e-01 insignificant 1.0000e+00 insignificant 0.077228 0.064278 0.0136560 31 0.08827 0.090686 -0.00241667 1.3862e-02 5.8918e-04 weaklyHypermeth 4.9380e-01 3.6824e-02 weaklyHypermeth 5.0752e-02 5.1099e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0180016 1.0034e-01 insignificant 1.00000000 insignificant 0.086307 0.049570 0.0476673 37 0.087219 0.039048 0.0481709 1.5598e-17 1.0000e+00 weaklyHypermeth 8.2092e-16 1.0000e+00 weaklyHypermeth 7.3784e-13 1.0000e+00 weaklyHypermeth 9.2230e-11 1.0000e+00 weaklyHypermeth 0.0353804 1.6362e-01 insignificant 1.0000e+00 insignificant 0.086307 0.064278 0.00835931 31 0.087219 0.090686 -0.0034675 2.9319e-01 2.0882e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.2086e-01 6.8782e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0182380 1.5712e-01 insignificant 1.000000 insignificant 0.049570 0.064278 -0.0496094 31 0.039048 0.090686 -0.0516384 1.00000000 9.8890e-17 weaklyHypometh 1.000000 7.6069e-15 weaklyHypometh 1.0000000 4.0692e-11 weaklyHypometh 1 5.8132e-09 weaklyHypometh -0.0536184 5.0910e-02 insignificant 0.5943327 insignificant chr5 159287550 159288550 22304 ADRA1B ENSG00000170214 0.765251 116 7 0.716324 139 7 0.74408 74 7 0.862637 42 4 0.932540 44 4 0.80597 177 7 0.840136 54 7 0.869519 129 7 0.683735 100 7 0.824150 71 7 0.871853 176 7 0.604875 47 6 0.602726 135 5 0.769301 48 4 0.686735 70 5 0.619048 23 1 0.625541 22 1 0.824176 100 4 0.842857 46 4 0.87805 186 7 0.785714 29 1 0.894898 53 4 0.804250 100 7 0.929825 67 7 0.559890 38 3 0.841662 141 7 0.814502 84 7 0.821429 20 0 0.832711 100 6 0.898302 194 7 0.798880 163 7 0.902809 239 7 0.4172911 145 7 0.5926915 96 4 0.0000000 32 2 0.1662338 21 2 0.1004252 80 7 0.692991 152 7 0.78644 50 4 0.717373 107 7 0.764286 32 4 0.842687 53 7 0.905724 37 4 0.790133 0.710595 0.653248 0.733309 0.860325 0.779975 0.793127 0.818513 0.609859 0.843666 0.803835 0.512391 0.565590 0.710370 0.724506 0.779874 0.635649 0.759474 0.853774 0.875500 0.903302 0.838612 0.810294 0.917246 0.580552 0.818426 0.841266 0.752358 0.773022 0.884759 0.770040 0.869626 0.4149413 0.678404 0.1374511 0.27512864 0.054442 0.6348435 0.733194 0.691962 0.790094 0.786837 0.779011 1 0.759311 0.844463 -0.08410988 7 0.77422 0.854424 -0.08020056 1.0000e+00 2.1088e-04 weaklyHypometh 1.0000e+00 5.2719e-02 weaklyHypometh 9.9873e-01 3.2216e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.05526447 0.13690366 insignificant 1.00000 insignificant 0.759311 0.429658 0.32975468 7 0.77422 0.439653 0.33457003 3.3165e-17 1.0000e+00 hypermethylated 1.5793e-15 1.0000e+00 hypermethylated 5.1334e-09 1.0000e+00 hypermethylated 3.2084e-07 1.0000e+00 hypermethylated 0.44020267 1.1478e-02 lowCoverage 2.0137e-01 lowCoverage 0.759311 0.767025 -0.0016142 7 0.77422 0.779472 -0.00524822 4.7711e-01 3.9451e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.9524e-01 3.0443e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0348263 4.0648e-01 insignificant 1.00000000 insignificant 0.844463 0.429658 0.4144850 7 0.854424 0.439653 0.4147706 1.0156e-19 1.0000e+00 hypermethylated 6.7704e-18 1.0000e+00 hypermethylated 5.4742e-09 1.0000e+00 hypermethylated 4.9766e-07 1.0000e+00 hypermethylated 0.4954671 6.7390e-03 lowCoverage 1.3753e-01 lowCoverage 0.844463 0.767025 0.08174200 7 0.854424 0.779472 0.0749523 6.2285e-04 9.9507e-01 weaklyHypermeth 3.8928e-02 1.0000e+00 weaklyHypermeth 9.3748e-02 7.0474e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0204382 6.4263e-01 insignificant 1.000000 insignificant 0.429658 0.767025 -0.3482949 7 0.439653 0.779472 -0.3398183 0.99995475 8.0033e-08 hypomethylated 1.000000 3.0782e-06 hypomethylated 0.9999998 2.3544e-05 hypomethylated 1 1.3850e-03 hypomethylated -0.4750289 7.8865e-03 lowCoverage 0.2189448 lowCoverage chr5 167212550 167213550 22381 ODZ2 ENSG00000145934 0.880517 213 6 0.775838 88 6 0.71250 96 6 0.891667 129 6 0.915079 34 5 0.84359 155 6 0.769872 90 6 0.853688 50 5 0.955556 52 6 0.734127 57 6 0.783035 117 6 0.862626 59 6 0.765012 92 6 NA 0 0 0.843803 90 6 0.837302 62 6 0.750000 48 6 0.887628 107 6 0.790344 91 6 0.83512 156 6 0.800000 16 1 0.955808 53 6 0.845610 104 6 0.892857 18 2 0.891026 41 2 0.824777 92 6 0.861111 25 2 0.785714 28 2 0.700000 49 3 0.853114 88 6 0.812169 61 6 0.789086 221 6 0.7942857 39 5 0.6695767 44 6 0.7484788 71 6 0.8918981 77 6 0.6984127 26 2 0.809863 95 6 0.89238 205 6 0.877553 241 6 0.866667 174 6 0.881543 271 6 0.893689 248 6 0.889753 0.812507 0.723930 0.897937 0.951625 0.849506 0.770772 0.846094 0.925926 0.787856 0.819599 0.846946 0.795366 NA 0.867979 0.875661 0.732804 0.912286 0.829995 0.813441 0.841270 0.926347 0.873717 0.852762 0.905678 0.845948 0.848545 0.817460 0.736111 0.891093 0.830184 0.799457 0.7612245 0.638826 0.7552280 0.88778660 0.796296 0.8148605 0.885863 0.906799 0.876543 0.895008 0.908258 2 0.828108 0.835427 -0.00581412 6 0.82584 0.825073 0.00077044 4.3749e-01 3.5070e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.7078e-01 2.8397e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00862537 0.72423793 lowCoverage 1.00000 lowCoverage 0.828108 0.792614 0.03680353 6 0.82584 0.796151 0.02969213 3.8391e-02 8.3142e-01 weaklyHypermeth 2.8023e-01 1.0000e+00 insignificant 1.2679e-01 8.4916e-01 insignificant 9.2551e-01 1.0000e+00 insignificant 0.05689482 1.5984e-01 insignificant 1.0000e+00 insignificant 0.828108 0.881475 -0.0592332 6 0.82584 0.882704 -0.05686007 9.9971e-01 6.5132e-03 weaklyHypometh 1.0000e+00 2.4116e-01 insignificant 9.9983e-01 1.4061e-02 weaklyHypometh 1.0000e+00 4.5358e-01 insignificant -0.0567185 1.8553e-03 weaklyHypometh 0.10913729 insignificant 0.835427 0.792614 0.0417852 6 0.825073 0.796151 0.0289217 4.3842e-02 8.3854e-01 weaklyHypermeth 3.1770e-01 1.0000e+00 insignificant 1.3551e-01 9.8191e-01 insignificant 9.4762e-01 1.0000e+00 insignificant 0.0655202 1.2132e-01 lowCoverage 1.0000e+00 lowCoverage 0.835427 0.881475 -0.05445124 6 0.825073 0.882704 -0.0576305 9.9848e-01 1.8685e-02 weaklyHypometh 1.0000e+00 6.5862e-01 insignificant 9.6762e-01 1.1711e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0480932 2.8954e-02 lowCoverage 0.908927 lowCoverage 0.792614 0.881475 -0.0975126 6 0.796151 0.882704 -0.0865522 0.99200717 2.4335e-03 weaklyHypometh 1.000000 3.0419e-02 weaklyHypometh 0.9878925 1.1246e-02 weaklyHypometh 1 1.6298e-01 insignificant -0.1136133 1.7907e-02 weaklyHypometh 0.3581370 insignificant chr5 169627350 169628350 22475 ENSG00000203776 0.588031 136 7 0.561994 198 5 0.35194 213 7 0.552083 98 10 0.378451 98 5 0.44250 167 9 0.418950 257 7 0.503457 211 7 0.414212 208 7 0.520507 187 7 0.425388 187 7 0.147198 150 4 0.420112 244 7 0.900000 12 1 0.701267 194 5 0.449925 157 6 0.274337 275 7 0.531739 135 8 0.362963 128 5 0.47500 185 10 0.496731 84 7 0.492857 69 4 0.441346 148 7 0.325485 76 7 0.553070 49 2 0.440596 220 7 0.262641 121 7 0.428968 45 4 0.628580 126 5 0.580077 209 7 0.598555 231 7 0.564062 279 8 0.1882100 263 7 0.1012506 131 5 0.3600000 16 1 0.3272727 67 8 0.2053535 76 5 0.437133 184 7 0.50758 163 9 0.527388 173 10 0.512235 98 8 0.525063 103 9 0.408984 153 11 0.472107 0.404047 0.412659 0.471187 0.416683 0.343378 0.349480 0.453263 0.322621 0.435940 0.516663 0.231608 0.364852 0.433086 0.456805 0.235414 0.304276 0.450084 0.392303 0.382794 0.574007 0.387586 0.474169 0.316103 0.505143 0.360435 0.356540 0.476845 0.500915 0.371458 0.435932 0.508885 0.1071985 0.135571 NA 0.13994911 0.167862 0.4830765 0.363034 0.462450 0.363280 0.348920 0.264122 2 0.334302 0.405552 -0.02612210 7 0.44317 0.501618 -0.05844929 9.1553e-01 1.5757e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.3754e-01 4.5113e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01341143 0.77911130 insignificant 1.00000 insignificant 0.334302 0.206242 0.13459493 6 0.44317 0.302540 0.14062891 1.0233e-09 8.0522e-01 weaklyHypermeth 2.4364e-08 1.0000e+00 weaklyHypermeth 1.2185e-05 9.9996e-01 weaklyHypermeth 3.7730e-04 1.0000e+00 weaklyHypermeth 0.20113272 8.6196e-03 weaklyHypermeth 1.6949e-01 insignificant 0.334400 0.452174 0.0292692 5 0.48346 0.498288 -0.01483111 1.2414e-01 4.7091e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.5293e-02 3.9580e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0252481 5.4770e-01 insignificant 1.00000000 insignificant 0.405552 0.206242 0.1665992 6 0.501618 0.302540 0.1990782 4.0581e-08 9.7957e-01 weaklyHypermeth 8.8219e-07 1.0000e+00 weaklyHypermeth 3.3820e-05 9.9997e-01 weaklyHypermeth 1.0569e-03 1.0000e+00 weaklyHypermeth 0.2145442 6.1423e-03 weaklyHypermeth 1.3649e-01 insignificant 0.405569 0.452174 0.05725092 5 0.510856 0.498288 0.0125681 3.2274e-02 4.2108e-01 weaklyHypermeth 8.0685e-01 1.0000e+00 insignificant 3.2207e-02 3.2349e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant -0.0118366 7.6542e-01 insignificant 1.000000 insignificant 0.206522 0.452174 -0.1373410 5 0.330044 0.498288 -0.1682445 0.95081483 8.4608e-05 weaklyHypometh 1.000000 1.6590e-03 weaklyHypometh 0.9971700 1.2316e-04 weaklyHypometh 1 4.7369e-03 weaklyHypometh -0.2263808 5.2061e-03 weaklyHypometh 0.1887867 insignificant chr5 169662050 169663050 22477 LCP2 ENSG00000043462 0.598923 111 7 0.495770 80 6 0.38542 53 5 0.452964 82 6 0.430556 41 5 0.58569 100 6 0.148299 61 7 0.486458 71 7 0.360119 54 5 0.622024 40 4 0.618128 185 7 0.291667 15 0 0.420569 131 7 0.622449 51 6 0.512755 68 5 0.523810 20 1 0.666667 12 0 0.617889 165 7 0.640728 110 5 0.66079 87 5 0.708458 81 7 0.585153 108 7 0.495312 64 7 0.415659 47 5 0.550893 54 5 0.402883 154 7 0.410657 123 7 0.520833 16 0 0.417504 90 7 0.384054 148 7 0.638544 146 7 0.413527 131 5 0.5056944 136 7 0.6437075 141 7 0.4595899 289 7 0.3571429 31 3 0.5140152 38 3 0.158872 229 7 0.51786 55 5 0.624293 85 5 0.271565 67 3 0.394517 62 3 0.556415 77 5 0.532156 0.391909 0.298544 0.441165 0.355987 0.443791 0.170689 0.566586 0.323625 0.486362 0.615955 0.386405 0.425682 0.578595 0.448682 0.341999 0.572202 0.566291 0.644536 0.563509 0.645621 0.451530 0.425121 0.297343 0.462899 0.340146 0.478986 0.669042 0.360128 0.278953 0.529406 0.383509 0.5256562 0.547908 0.3067017 0.32524272 0.489409 0.1496414 0.384882 0.577028 0.241979 0.393928 0.432989 1 0.502928 0.433391 0.05637998 7 0.54288 0.497945 0.04493750 6.0890e-02 9.7187e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.2445e-01 8.3183e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01179346 0.78858038 insignificant 1.00000 insignificant 0.502928 0.383102 0.11145529 7 0.54288 0.422835 0.12004762 3.8547e-06 1.6365e-01 weaklyHypermeth 5.7532e-05 1.0000e+00 weaklyHypermeth 7.5101e-03 3.0355e-01 weaklyHypermeth 9.5064e-02 1.0000e+00 weaklyHypermeth 0.06724627 3.9534e-01 insignificant 1.0000e+00 insignificant 0.502928 0.495652 0.0364698 5 0.54288 0.490295 0.05258721 1.2496e-01 6.3662e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.2075e-01 8.4283e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0341540 6.4202e-01 lowCoverage 1.00000000 lowCoverage 0.433391 0.383102 0.0342538 7 0.497945 0.422835 0.0751101 2.4238e-03 1.7646e-01 weaklyHypermeth 2.2652e-02 1.0000e+00 weaklyHypermeth 6.3611e-02 2.5743e-01 insignificant 5.0485e-01 1.0000e+00 insignificant 0.0554528 4.7977e-01 insignificant 1.0000e+00 insignificant 0.433506 0.497110 -0.02746598 5 0.498173 0.546929 -0.0487558 3.2567e-01 2.3642e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.8889e-01 5.0173e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0223605 7.5961e-01 lowCoverage 1.000000 lowCoverage 0.383102 0.495652 -0.0969184 5 0.422835 0.490295 -0.0674604 0.61799617 4.6707e-02 weaklyHypometh 1.000000 3.5928e-01 insignificant 0.6339687 5.3143e-01 insignificant 1 1.0000e+00 insignificant -0.0330923 7.2817e-01 lowCoverage 1.0000000 lowCoverage chr5 170810350 170811350 22497 FGF18 ENSG00000156427 0.088889 2314 45 0.148807 968 48 0.14446 1436 51 0.143886 2076 46 0.190077 1131 45 0.22844 2234 52 0.171099 1468 54 0.161644 1107 50 0.149941 1258 51 0.177830 1598 47 0.150549 1518 54 0.184055 1020 45 0.164022 1203 49 0.235346 725 28 0.147713 1525 51 0.162399 975 42 0.109735 494 27 0.146620 4197 50 0.120285 1818 49 0.15728 1931 52 0.218783 699 39 0.125170 1218 37 0.135837 1433 50 0.131443 619 35 0.146793 1832 38 0.140469 1994 50 0.129124 1464 44 0.109999 838 45 0.155242 1383 48 0.118964 1640 52 0.126994 1899 47 0.185991 1821 49 0.1517049 976 48 0.1070405 1714 51 0.2310458 1120 21 0.1252907 351 25 0.1564991 786 49 0.168166 1652 53 0.17093 2076 51 0.218762 1864 51 0.178409 1586 41 0.156157 2771 49 0.237913 1862 45 0.143160 0.125938 0.150740 0.133612 0.126653 0.181348 0.146323 0.140984 0.140472 0.145433 0.155609 0.180348 0.130694 0.172058 0.143176 0.138702 0.137826 0.145526 0.113868 0.135170 0.175539 0.159975 0.136961 0.136862 0.129649 0.149479 0.144653 0.118908 0.152078 0.129164 0.118097 0.172973 0.1417041 0.155184 0.1383975 0.16787023 0.163589 0.1458886 0.190159 0.220209 0.162428 0.168597 0.169889 25 0.140621 0.144776 0.00286872 51 0.21486 0.185334 0.02952805 2.0706e-01 9.6667e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.2600e-01 9.9889e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01541963 0.20114791 insignificant 1.00000 insignificant 0.140584 0.160625 0.00042045 50 0.20855 0.140581 0.06797056 5.4878e-13 9.9669e-01 weaklyHypermeth 1.6630e-11 1.0000e+00 weaklyHypermeth 1.5617e-11 9.9812e-01 weaklyHypermeth 1.5617e-09 1.0000e+00 weaklyHypermeth 0.00252910 8.9824e-01 insignificant 1.0000e+00 insignificant 0.140464 0.197953 -0.0361597 50 0.20400 0.222031 -0.01803296 9.8299e-01 2.4376e-18 weaklyHypometh 1.0000e+00 8.1254e-16 weaklyHypometh 9.9528e-01 1.3742e-13 weaklyHypometh 1.0000e+00 6.8711e-11 weaklyHypometh -0.0332802 9.9971e-02 insignificant 1.00000000 insignificant 0.144614 0.160703 -0.0011241 50 0.155031 0.143502 0.0115288 3.0798e-05 9.9709e-01 inconclusive 4.9674e-04 1.0000e+00 inconclusive 1.6568e-05 9.9876e-01 inconclusive 5.7130e-04 1.0000e+00 inconclusive -0.0128905 5.2942e-01 insignificant 1.0000e+00 insignificant 0.144463 0.197972 -0.03918860 50 0.163074 0.225555 -0.0624809 9.9961e-01 6.9278e-16 weaklyHypometh 1.0000e+00 2.3093e-13 weaklyHypometh 9.9998e-01 8.0015e-12 weaklyHypometh 1.0000e+00 4.0007e-09 weaklyHypometh -0.0486999 2.9571e-02 weaklyHypometh 0.908927 insignificant 0.160644 0.197972 -0.0365320 49 0.141870 0.225555 -0.0836857 1.00000000 2.1238e-20 weaklyHypometh 1.000000 2.6548e-18 weaklyHypometh 1.0000000 1.5517e-13 weaklyHypometh 1 3.1034e-11 weaklyHypometh -0.0358093 1.5819e-01 insignificant 1.0000000 insignificant chr5 172092650 172093650 22521 NEURL1B ENSG00000214357 0.734118 402 10 0.676399 606 10 0.65872 339 10 0.858683 362 10 0.718326 178 9 0.87309 643 10 0.769010 219 10 0.831980 373 9 0.704897 237 9 0.831572 235 8 0.781103 564 10 0.586966 110 7 0.834576 438 10 0.760077 144 8 0.710495 264 9 0.554122 109 5 0.341270 36 3 0.544426 490 9 0.828261 515 10 0.79401 440 10 0.795151 145 9 0.648218 233 9 0.785149 320 10 0.616344 197 11 0.644414 231 10 0.830290 729 10 0.755961 313 9 0.577473 90 7 0.848513 452 10 0.845021 810 10 0.732749 718 10 0.887583 568 10 0.0054113 627 9 0.0230642 309 10 0.0041972 444 7 0.0092593 127 7 0.1127725 478 10 0.012835 820 10 0.70424 338 10 0.505045 365 10 0.707712 278 10 0.598996 251 10 0.634598 304 10 0.789037 0.703106 0.664629 0.852309 0.799306 0.832482 0.738427 0.803056 0.753817 0.826776 0.842398 0.557136 0.772825 0.701743 0.685790 0.622254 0.402074 0.526440 0.868631 0.809415 0.808589 0.602769 0.820016 0.622613 0.691203 0.816309 0.740422 0.681988 0.809872 0.839811 0.848544 0.832090 0.0066388 0.012432 0.0072910 0.01842384 0.076073 0.0251208 0.667962 0.472752 0.664233 0.489568 0.604839 7 0.764618 0.807740 -0.04224722 10 0.72195 0.659329 0.06261782 9.9801e-01 8.1104e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9654e-01 2.5478e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02763380 0.51511608 insignificant 1.00000 insignificant 0.764513 0.026381 0.73965131 10 0.67917 0.052672 0.62649749 4.5023e-95 1.0000e+00 hypermethylated 2.2512e-92 1.0000e+00 hypermethylated 2.9308e-22 1.0000e+00 hypermethylated 5.8616e-20 1.0000e+00 hypermethylated 0.69168180 1.8188e-16 hypermethylated 6.0627e-14 hypermethylated 0.764627 0.644531 0.1433718 10 0.73577 0.606097 0.12966938 9.6733e-10 9.1540e-01 weaklyHypermeth 1.9347e-07 1.0000e+00 weaklyHypermeth 9.8994e-06 9.2999e-01 weaklyHypermeth 1.9799e-03 1.0000e+00 weaklyHypermeth 0.0894868 9.1249e-02 insignificant 1.00000000 insignificant 0.808037 0.026381 0.7833507 10 0.722303 0.052672 0.6696308 9.5935e-94 1.0000e+00 hypermethylated 4.7967e-91 1.0000e+00 hypermethylated 9.1829e-21 1.0000e+00 hypermethylated 2.2957e-18 1.0000e+00 hypermethylated 0.7193156 6.6518e-13 hypermethylated 6.6518e-10 hypermethylated 0.808373 0.644531 0.18130344 10 0.782494 0.606097 0.1763971 4.6340e-14 9.8788e-01 weaklyHypermeth 1.1585e-11 1.0000e+00 weaklyHypermeth 3.8584e-06 9.9441e-01 weaklyHypermeth 7.7167e-04 1.0000e+00 weaklyHypermeth 0.1171206 3.6222e-02 weaklyHypermeth 0.970640 insignificant 0.026044 0.644531 -0.6107614 10 0.015394 0.606097 -0.5907029 1.00000000 1.4326e-45 hypomethylated 1.000000 3.5815e-43 hypomethylated 1.0000000 9.2443e-14 hypomethylated 1 2.3111e-11 hypomethylated -0.6021950 1.0509e-05 hypomethylated 0.0037232 hypomethylated chr5 172109550 172110550 22523 NEURL1B ENSG00000214357 0.909827 239 6 0.884830 346 6 0.84475 236 6 0.966964 171 6 0.958054 195 6 0.94611 546 6 0.907744 265 6 0.955262 269 6 0.939440 161 6 0.937947 210 6 0.767792 303 6 0.833333 72 6 0.950142 161 6 0.886640 128 6 0.975029 289 6 0.923684 127 6 NA 0 0 0.797202 272 6 0.952275 452 6 0.97019 467 6 0.776515 57 5 1.000000 4 0 0.810433 272 6 0.923737 62 5 1.000000 4 0 0.909928 363 6 0.906004 171 6 0.897902 66 5 0.875148 411 6 0.933937 391 6 0.948129 449 6 0.940674 446 6 0.2030236 235 6 0.3284407 261 6 0.7500000 62 2 NA 0 0 0.3839432 194 6 0.301781 404 6 0.79263 387 6 0.880427 289 6 0.931111 110 6 0.860945 252 6 0.833862 140 6 0.861459 0.860512 0.810328 0.940998 0.905045 0.937278 0.879022 0.942615 0.944177 0.897519 0.841134 0.833333 0.911092 0.899588 0.960767 0.950805 NA 0.836084 0.951098 0.959736 0.810481 0.925314 0.942711 0.868194 0.974163 0.854621 0.887151 0.934185 0.844110 0.903507 0.926893 0.922394 0.2503087 0.222115 0.7679799 NA 0.508218 0.5688352 0.918096 0.840470 0.941377 0.918132 0.871783 1 0.923390 0.921365 0.00343602 6 0.90049 0.876868 0.02361920 5.0270e-01 7.9481e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.4699e-01 6.5450e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00070538 0.97650779 lowCoverage 1.00000 lowCoverage 0.923563 0.382353 0.53907012 6 0.94215 0.266332 0.67582172 1.7061e-50 1.0000e+00 hypermethylated 2.4372e-48 1.0000e+00 hypermethylated 6.8639e-08 1.0000e+00 hypermethylated 3.4319e-06 1.0000e+00 hypermethylated 0.51746839 4.8376e-03 lowCoverage 1.1003e-01 lowCoverage 0.923547 0.894737 0.0277690 6 0.93389 0.765180 0.16870993 2.4261e-03 9.2793e-01 weaklyHypermeth 1.0747e-01 1.0000e+00 insignificant 2.2533e-03 8.8935e-01 weaklyHypermeth 1.8423e-01 1.0000e+00 insignificant 0.0511099 9.8909e-02 insignificant 1.00000000 insignificant 0.921336 0.382684 0.5510854 6 0.859278 0.304380 0.5548981 7.1295e-38 1.0000e+00 hypermethylated 1.0185e-35 1.0000e+00 hypermethylated 1.2849e-06 1.0000e+00 hypermethylated 6.1184e-05 1.0000e+00 hypermethylated 0.5167630 4.5157e-03 lowCoverage 1.1579e-01 lowCoverage 0.921336 0.894737 0.02798056 6 0.859278 0.765180 0.0940975 7.6443e-04 7.8464e-01 weaklyHypermeth 4.2468e-02 1.0000e+00 weaklyHypermeth 8.9069e-03 9.5889e-01 weaklyHypermeth 4.4534e-01 1.0000e+00 insignificant 0.0504045 1.2511e-01 lowCoverage 1.000000 lowCoverage 0.382684 0.894737 -0.5123646 6 0.304380 0.765180 -0.4608006 1.00000000 1.0636e-17 hypomethylated 1.000000 9.6687e-16 hypomethylated 1.0000000 6.9498e-05 hypomethylated 1 2.8958e-03 hypomethylated -0.4663585 6.3475e-03 lowCoverage 0.1923495 lowCoverage chr5 172159250 172160250 22532 ENSG00000206741 0.919476 455 7 0.866525 298 11 0.78462 362 10 0.959168 320 8 0.937052 122 7 0.90356 332 9 0.922762 159 7 0.912187 163 8 0.905872 110 7 0.852991 107 7 0.939188 280 8 0.875000 29 3 0.978836 96 4 0.976042 67 4 0.894048 103 4 0.867647 65 3 NA 0 0 0.662933 406 8 0.843915 172 7 0.80386 287 7 0.974308 78 3 0.922078 39 3 0.917607 194 10 0.907407 29 4 0.914392 353 7 0.919066 462 11 0.887418 140 4 0.956608 82 3 0.954856 179 7 0.955892 448 11 0.840148 342 10 0.835320 222 7 0.2396606 346 10 0.5637468 268 8 0.9270833 75 3 0.5495062 204 8 0.3943915 227 8 0.217339 451 10 0.89253 296 8 0.790122 259 11 0.872396 299 8 0.851900 232 4 0.920893 280 8 0.931424 0.849107 0.823443 0.973411 0.923176 0.921982 0.893026 0.877222 0.874852 0.916191 0.943808 0.758844 0.959119 0.969654 0.891296 0.709212 NA 0.566280 0.892108 0.907464 0.949950 0.849057 0.900906 0.921384 0.899603 0.937930 0.917399 0.892214 0.950291 0.935152 0.931680 0.930573 0.2098799 0.488026 NA 0.59410377 0.367397 0.1845056 0.841280 0.788875 0.810505 0.867560 0.917155 3 0.862446 0.914520 -0.05726766 10 0.86801 0.921454 -0.05344346 1.0000e+00 5.3390e-04 weaklyHypometh 1.0000e+00 5.9322e-02 weaklyHypometh 9.8562e-01 9.0726e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03091589 0.16004685 insignificant 1.00000 insignificant 0.862446 0.375796 0.50035527 10 0.86801 0.387288 0.48072282 1.6941e-35 9.9998e-01 hypermethylated 2.1176e-33 1.0000e+00 hypermethylated 9.1219e-14 1.0000e+00 hypermethylated 1.0135e-11 1.0000e+00 hypermethylated 0.40255465 1.2750e-02 weaklyHypermeth 2.1610e-01 insignificant 0.862411 0.849927 0.0164992 8 0.85601 0.806704 0.04930729 1.2203e-01 3.9424e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.6126e-01 9.0308e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0189414 5.1457e-01 insignificant 1.00000000 insignificant 0.914720 0.375557 0.5510248 11 0.927496 0.357496 0.5699996 1.0049e-36 1.0000e+00 hypermethylated 1.2562e-34 1.0000e+00 hypermethylated 1.9803e-13 1.0000e+00 hypermethylated 3.9606e-11 1.0000e+00 hypermethylated 0.4334705 9.6645e-03 weaklyHypermeth 1.8586e-01 insignificant 0.914487 0.849927 0.07157451 8 0.914313 0.806704 0.1076092 2.7020e-07 9.8396e-01 weaklyHypermeth 3.8599e-05 1.0000e+00 weaklyHypermeth 4.8758e-03 9.9468e-01 weaklyHypermeth 2.8681e-01 1.0000e+00 insignificant 0.0498573 9.1902e-02 insignificant 1.000000 insignificant 0.376036 0.849927 -0.4864023 8 0.422495 0.806704 -0.3842085 0.99999820 1.1557e-15 hypomethylated 1.000000 8.2551e-14 hypomethylated 0.9999992 4.5119e-08 hypomethylated 1 5.0133e-06 hypomethylated -0.3836132 1.5150e-02 weaklyHypometh 0.3156224 insignificant chr5 172166650 172167650 22534 ENSG00000206741 0.555713 118 6 0.484641 322 8 0.49285 248 7 0.559071 121 5 0.491227 118 3 0.51541 307 8 0.379408 155 6 0.324836 199 8 0.440445 102 4 0.522569 157 2 0.562869 327 8 0.516304 56 2 0.513675 127 4 0.631937 105 3 0.399046 151 3 0.210678 79 3 0.200000 6 0 0.527540 62 4 0.433585 217 5 0.46063 206 6 0.440244 115 8 0.339855 64 4 0.526210 111 7 0.512354 131 6 0.375921 89 3 0.565777 301 8 0.457860 261 5 0.268586 84 5 0.644877 166 4 0.484738 340 8 0.523932 371 8 0.565633 237 7 0.5053302 187 8 0.5489583 182 4 0.4713233 289 7 0.4775132 47 5 0.2765883 153 8 0.425240 380 8 0.58164 130 5 0.651630 160 6 0.581116 123 5 0.450783 55 2 0.729448 103 5 0.305479 0.203783 0.176891 0.417284 0.226298 0.329362 0.212495 0.218692 0.246967 0.264154 0.375699 0.202640 0.378385 0.428332 0.274145 0.078267 0.265506 0.275721 0.207764 0.261842 0.209281 0.348158 0.255702 0.197830 0.302195 0.388146 0.207834 0.239398 0.451646 0.269225 0.331504 0.270106 0.3578484 0.315067 0.3080293 0.16107900 0.141053 0.1154206 0.330557 0.418347 0.309078 0.215030 0.421376 2 0.331134 0.336726 -0.02210798 7 0.45320 0.473697 -0.02049856 7.2465e-01 2.6776e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.5688e-01 5.0832e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01437735 0.71963907 lowCoverage 1.00000 lowCoverage 0.331132 0.260905 0.05698164 6 0.50400 0.432197 0.07180167 4.0293e-03 9.9590e-01 weaklyHypermeth 3.4439e-02 1.0000e+00 weaklyHypermeth 2.6673e-02 7.0112e-01 weaklyHypermeth 2.5403e-01 1.0000e+00 insignificant 0.01029611 8.2770e-01 lowCoverage 1.0000e+00 lowCoverage 0.331132 0.355517 -0.0475929 3 0.50400 0.591291 -0.08729203 9.9419e-01 3.4509e-04 lowCoverage 1.0000e+00 2.4649e-02 lowCoverage 9.9902e-01 5.5982e-03 lowCoverage 1.0000e+00 2.4922e-01 lowCoverage -0.1378025 3.5796e-02 lowCoverage 0.67538896 lowCoverage 0.337778 0.260905 0.0785221 6 0.529622 0.432197 0.0974249 3.7361e-04 9.9966e-01 weaklyHypermeth 4.5014e-03 1.0000e+00 weaklyHypermeth 3.1076e-02 8.0603e-01 weaklyHypermeth 2.8510e-01 1.0000e+00 insignificant 0.0246735 6.2642e-01 insignificant 1.0000e+00 insignificant 0.337778 0.355517 -0.03666358 3 0.529622 0.591291 -0.0616688 9.7800e-01 8.0229e-03 lowCoverage 1.0000e+00 3.6468e-01 lowCoverage 9.8945e-01 1.1664e-02 lowCoverage 1.0000e+00 7.0139e-01 lowCoverage -0.1234251 5.7065e-02 lowCoverage 1.000000 lowCoverage 0.260905 0.355517 -0.1373112 3 0.432197 0.591291 -0.1590937 0.99942479 1.8612e-05 lowCoverage 1.000000 4.4315e-04 lowCoverage 0.9994407 2.4672e-03 lowCoverage 1 5.1417e-02 lowCoverage -0.1480986 3.7941e-02 lowCoverage 0.5343746 lowCoverage chr5 172376250 172377250 22552 ATP6V0E1 ENSG00000113732 0.611765 81 5 0.678516 179 6 0.50616 66 6 0.657150 140 6 0.541156 68 3 0.75286 223 6 0.633459 64 3 0.820606 90 5 0.758634 71 6 0.645413 103 7 0.720981 162 6 0.423611 33 3 0.781715 94 5 0.794218 30 2 0.740989 96 5 0.807692 39 3 0.718786 792 3 0.814694 141 6 0.740148 107 5 0.67472 143 5 0.832692 60 6 0.834524 77 5 0.705581 92 6 0.521060 58 4 0.509375 57 5 0.760772 178 6 0.625000 72 6 0.506548 34 3 0.697917 82 5 0.739154 147 6 0.777619 180 6 0.699094 239 6 0.6990198 155 6 0.7988268 85 5 0.4428495 121 4 0.6484127 28 4 0.8042502 82 5 0.723544 151 6 0.72229 100 5 0.820079 149 6 0.677778 111 6 0.610714 54 4 0.769260 91 6 0.624469 0.539456 0.605195 0.671482 0.561094 0.703783 0.686021 0.670995 0.560034 0.603065 0.606909 0.570681 0.723994 0.705684 0.656049 0.700268 0.823425 0.669706 0.746384 0.640983 0.719754 0.680603 0.602501 0.498618 0.670157 0.676048 0.588220 0.608975 0.630999 0.566254 0.645490 0.547925 0.5229217 0.650917 0.5360001 0.54821117 0.655977 0.5882354 0.660376 0.664908 0.700407 0.704647 0.580002 3 0.732550 0.648119 0.09177332 5 0.71055 0.675212 0.03533557 3.1521e-03 9.6419e-01 weaklyHypermeth 6.3042e-01 1.0000e+00 insignificant 1.2235e-01 8.9414e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00705200 0.86802025 lowCoverage 1.00000 lowCoverage 0.732550 0.607717 0.11826254 5 0.71055 0.666973 0.04357474 3.2164e-03 8.2791e-01 weaklyHypermeth 2.8214e-02 1.0000e+00 weaklyHypermeth 2.6259e-01 5.2835e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00501286 9.3521e-01 lowCoverage 1.0000e+00 lowCoverage 0.732550 0.691089 0.0404814 5 0.71055 0.771392 -0.06084398 4.9510e-01 5.0050e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.1749e-01 3.4010e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0288610 5.2543e-01 lowCoverage 1.00000000 lowCoverage 0.648119 0.607717 0.0230725 5 0.675212 0.666973 0.0082392 2.8321e-01 5.0861e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.5679e-01 3.0467e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0020391 9.7540e-01 insignificant 1.0000e+00 insignificant 0.648119 0.691089 -0.05364783 6 0.675212 0.771392 -0.0961796 9.8213e-01 6.2570e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7401e-01 1.4761e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0359131 4.8615e-01 insignificant 1.000000 insignificant 0.607717 0.691089 -0.0775224 5 0.666973 0.771392 -0.1044187 0.80544143 5.9717e-02 insignificant 1.000000 4.3589e-01 insignificant 0.7908160 3.3012e-01 insignificant 1 1.0000e+00 insignificant -0.0338739 6.1762e-01 insignificant 1.0000000 insignificant chr5 172376650 172377650 22553 ATP6V0E1 ENSG00000113732 0.611765 81 5 0.678516 179 6 0.50616 66 6 0.657150 140 6 0.541156 68 3 0.75286 223 6 0.633459 64 3 0.820606 90 5 0.758634 71 6 0.645413 103 7 0.720981 162 6 0.423611 33 3 0.781715 94 5 0.794218 30 2 0.740989 96 5 0.807692 39 3 0.718786 792 3 0.814694 141 6 0.740148 107 5 0.67472 143 5 0.832692 60 6 0.834524 77 5 0.705581 92 6 0.521060 58 4 0.509375 57 5 0.760772 178 6 0.625000 72 6 0.506548 34 3 0.697917 82 5 0.739154 147 6 0.777619 180 6 0.699094 239 6 0.6990198 155 6 0.7988268 85 5 0.4428495 121 4 0.6484127 28 4 0.8042502 82 5 0.723544 151 6 0.72229 100 5 0.820079 149 6 0.677778 111 6 0.610714 54 4 0.769260 91 6 0.624469 0.539456 0.605195 0.671482 0.561094 0.703783 0.686021 0.670995 0.560034 0.603065 0.606909 0.570681 0.723994 0.705684 0.656049 0.700268 0.823425 0.669706 0.746384 0.640983 0.719754 0.680603 0.602501 0.498618 0.670157 0.676048 0.588220 0.608975 0.630999 0.566254 0.645490 0.547925 0.5229217 0.650917 0.5360001 0.54821117 0.655977 0.5882354 0.660376 0.664908 0.700407 0.704647 0.580002 3 0.732550 0.648119 0.09177332 5 0.71055 0.675212 0.03533557 3.1521e-03 9.6419e-01 weaklyHypermeth 6.3042e-01 1.0000e+00 insignificant 1.2235e-01 8.9414e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00705200 0.86802025 lowCoverage 1.00000 lowCoverage 0.732550 0.607717 0.11826254 5 0.71055 0.666973 0.04357474 3.2164e-03 8.2791e-01 weaklyHypermeth 2.8214e-02 1.0000e+00 weaklyHypermeth 2.6259e-01 5.2835e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00501286 9.3521e-01 lowCoverage 1.0000e+00 lowCoverage 0.732550 0.691089 0.0404814 5 0.71055 0.771392 -0.06084398 4.9510e-01 5.0050e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.1749e-01 3.4010e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0288610 5.2543e-01 lowCoverage 1.00000000 lowCoverage 0.648119 0.607717 0.0230725 5 0.675212 0.666973 0.0082392 2.8321e-01 5.0861e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.5679e-01 3.0467e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0020391 9.7540e-01 insignificant 1.0000e+00 insignificant 0.648119 0.691089 -0.05364783 6 0.675212 0.771392 -0.0961796 9.8213e-01 6.2570e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7401e-01 1.4761e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0359131 4.8615e-01 insignificant 1.000000 insignificant 0.607717 0.691089 -0.0775224 5 0.666973 0.771392 -0.1044187 0.80544143 5.9717e-02 insignificant 1.000000 4.3589e-01 insignificant 0.7908160 3.3012e-01 insignificant 1 1.0000e+00 insignificant -0.0338739 6.1762e-01 insignificant 1.0000000 insignificant chr5 173029950 173030950 22577 BOD1 ENSG00000145919 0.405385 158 5 0.493452 85 5 0.51169 107 5 0.407153 184 5 0.382251 90 5 0.61928 201 5 0.495579 109 5 0.456710 151 5 0.450047 131 5 0.607553 69 2 0.639087 194 5 0.433333 24 2 0.427906 135 5 0.658785 80 5 0.423183 136 5 0.200000 25 5 NA 0 0 0.370329 133 5 0.517453 160 2 0.44450 110 5 0.403567 52 5 0.638889 36 2 0.641306 102 5 0.450146 87 5 0.600649 63 5 0.539286 154 5 0.283965 157 5 0.607047 73 2 0.326390 96 5 0.580494 209 5 0.566051 135 5 0.533387 149 5 0.0190584 154 5 0.0296346 140 5 0.0000000 217 5 1.0000000 4 0 0.1691768 166 6 0.131280 185 5 0.74776 101 5 0.556349 136 5 0.693910 164 5 0.635663 87 5 0.598232 180 6 0.669610 0.573190 0.601278 0.658815 0.576712 0.681118 0.704571 0.521793 0.502552 0.763817 0.706954 0.747945 0.511205 0.659370 0.568304 0.041096 NA 0.559467 0.527657 0.650217 0.871783 0.611076 0.612395 0.761646 0.632539 0.571575 0.387147 0.539080 0.470515 0.586362 0.698976 0.589727 0.0315402 0.018076 0.0000000 0.88103929 0.054541 0.2380444 0.672128 0.667379 0.797813 0.721866 0.583726 2 0.566915 0.540871 0.01310962 5 0.52686 0.451362 0.07549830 9.0062e-01 4.7363e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.1715e-01 6.1945e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04354507 0.32206454 lowCoverage 1.00000 lowCoverage 0.566725 0.062356 0.50383137 5 0.45927 0.144795 0.31447433 2.4645e-24 9.9794e-01 hypermethylated 1.4497e-22 1.0000e+00 hypermethylated 3.0031e-06 9.9819e-01 hypermethylated 1.1123e-04 1.0000e+00 hypermethylated 0.24586129 1.8089e-01 lowCoverage 1.0000e+00 lowCoverage 0.566725 0.647676 -0.1058333 5 0.45927 0.644351 -0.18508245 9.9997e-01 1.0474e-04 weaklyHypometh 1.0000e+00 9.5214e-03 weaklyHypometh 9.9988e-01 2.3555e-03 weaklyHypometh 1.0000e+00 1.6140e-01 insignificant -0.1756627 2.4695e-03 lowCoverage 0.11883630 lowCoverage 0.541699 0.062356 0.4789897 5 0.515842 0.144795 0.3710477 4.0953e-19 9.9999e-01 hypermethylated 2.4788e-17 1.0000e+00 hypermethylated 1.9905e-07 1.0000e+00 hypermethylated 1.1709e-05 1.0000e+00 hypermethylated 0.2894064 1.2738e-01 lowCoverage 1.0000e+00 lowCoverage 0.542334 0.648204 -0.11934788 5 0.545112 0.688807 -0.1436954 9.9982e-01 5.1710e-03 weaklyHypometh 1.0000e+00 3.6468e-01 insignificant 9.9993e-01 1.2001e-02 weaklyHypometh 1.0000e+00 7.0139e-01 insignificant -0.1321177 1.8791e-02 lowCoverage 0.831305 lowCoverage 0.062356 0.647676 -0.5902249 5 0.144795 0.644351 -0.4995568 0.99999952 1.5573e-19 hypomethylated 1.000000 1.7304e-17 hypomethylated 0.9999999 5.5172e-06 hypomethylated 1 3.9408e-04 hypomethylated -0.4215240 4.3423e-02 lowCoverage 0.5708227 lowCoverage chr5 173126050 173127050 22588 BOD1 ENSG00000145919 0.836011 265 6 0.630813 169 4 0.75063 50 5 0.843061 196 6 0.813194 105 7 0.84534 182 3 0.815467 135 8 0.823810 59 3 0.753042 66 5 0.899575 79 7 0.841961 109 6 0.727130 110 5 0.844877 77 7 0.771795 92 8 0.749094 89 8 0.463675 87 7 0.495126 98 5 0.861655 248 7 0.653248 120 4 0.93156 202 3 0.697976 44 3 1.000000 7 0 0.889554 190 8 0.900227 41 3 0.734788 135 3 0.749328 115 6 0.959712 63 3 0.765056 35 3 0.815027 117 5 0.881979 97 4 0.972698 89 4 0.848533 162 4 0.8618152 130 6 0.7615385 43 3 0.6592854 192 8 1.0000000 1 0 0.6345899 200 7 0.752358 125 3 0.85190 188 5 0.839983 117 7 0.895397 214 6 0.867262 181 6 0.812595 80 4 0.823216 0.833452 0.751362 0.896803 0.868421 0.913251 0.816946 0.861779 0.691776 0.896303 0.825906 NA 0.953008 0.879386 0.789568 0.000000 0.557133 0.880391 0.798897 0.886563 0.598444 1.000000 0.827378 0.768379 0.909661 0.914951 0.892882 0.709126 0.865186 0.931067 0.937135 0.946549 0.8652832 0.772267 0.4350258 NA 0.577373 0.7575689 0.856576 0.850446 0.899427 0.916212 0.840129 1 0.828999 0.879121 -0.04409065 5 0.80553 0.871201 -0.06566757 9.9515e-01 4.8108e-03 weaklyHypometh 1.0000e+00 3.2072e-01 insignificant 9.9974e-01 2.7250e-04 weaklyHypometh 1.0000e+00 1.3625e-01 insignificant -0.08368631 0.04541724 lowCoverage 1.00000 lowCoverage 0.828999 0.674385 0.16792186 4 0.80553 0.714153 0.09138045 7.4767e-06 9.7093e-01 lowCoverage 1.0242e-04 1.0000e+00 lowCoverage 1.9460e-01 7.3131e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.01071096 8.6699e-01 lowCoverage 1.0000e+00 lowCoverage 0.828999 0.867949 -0.0423018 5 0.80553 0.877456 -0.07192247 9.9574e-01 6.7526e-03 weaklyHypometh 1.0000e+00 2.4116e-01 insignificant 9.9904e-01 5.4734e-03 weaklyHypometh 1.0000e+00 2.4922e-01 insignificant -0.0858731 1.0598e-02 weaklyHypometh 0.32115279 insignificant 0.879121 0.674385 0.2087136 4 0.871201 0.714153 0.1570480 3.5090e-06 9.9984e-01 lowCoverage 6.4981e-05 1.0000e+00 lowCoverage 5.7878e-03 9.9771e-01 lowCoverage 7.7171e-02 1.0000e+00 lowCoverage 0.0729754 2.7663e-01 lowCoverage 1.0000e+00 lowCoverage 0.879121 0.867949 0.00528546 5 0.871201 0.877456 -0.0062549 5.9459e-01 6.1853e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.0709e-01 8.5003e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0021868 9.4637e-01 lowCoverage 1.000000 lowCoverage 0.674385 0.867949 -0.2066308 4 0.714153 0.877456 -0.1633029 0.99784938 6.6121e-05 lowCoverage 1.000000 1.3518e-03 lowCoverage 0.9865016 2.2889e-02 lowCoverage 1 2.8612e-01 lowCoverage -0.0751621 2.3881e-01 lowCoverage 1.0000000 lowCoverage chr5 173219650 173220650 22613 BOD1 ENSG00000145919 0.806436 130 4 0.791240 207 4 0.92381 115 4 0.864916 90 5 0.908134 82 4 0.95065 151 4 0.819425 181 5 0.778480 134 4 0.739409 103 4 0.957143 31 2 0.901692 222 5 0.649123 39 4 0.923755 79 4 0.881944 52 4 0.855934 89 4 0.882143 38 2 NA 0 0 0.850517 71 3 0.889056 52 4 0.85303 177 5 0.977778 55 4 0.888889 20 2 0.841703 80 5 0.870643 64 5 1.000000 32 2 0.899453 257 5 0.876917 155 4 0.879216 51 4 0.967333 69 4 0.892954 241 5 0.926809 232 5 0.963164 150 4 0.5377920 130 5 0.7931677 97 4 0.8000000 106 5 0.7812500 34 4 0.5360963 172 5 0.721080 222 5 0.95362 211 4 0.778196 190 5 0.825736 59 3 0.402778 31 2 0.882857 110 5 0.754659 0.801039 0.905261 0.857841 0.831432 0.918436 0.792686 0.862484 0.808406 0.917083 0.897608 0.724942 0.870321 0.886752 0.824059 0.733267 NA 0.834416 0.859141 0.824211 0.991453 0.811966 0.912905 0.825641 0.989460 0.908548 0.888404 0.781050 0.931259 0.862125 0.895778 0.907674 0.5552483 0.762477 0.9230769 0.93269231 0.561147 0.6277027 0.920064 0.838233 0.875604 0.484460 0.801299 2 0.844347 0.898293 -0.05294932 4 0.85112 0.905619 -0.05450043 9.9996e-01 9.8466e-04 lowCoverage 1.0000e+00 9.8466e-02 lowCoverage 9.9965e-01 1.4668e-03 lowCoverage 1.0000e+00 3.2981e-01 lowCoverage -0.06136087 0.01179411 lowCoverage 1.00000 lowCoverage 0.844347 0.653088 0.19080385 4 0.85112 0.662431 0.18868799 8.3879e-09 9.9997e-01 lowCoverage 1.7599e-07 1.0000e+00 lowCoverage 2.9370e-02 9.8353e-01 lowCoverage 2.6460e-01 1.0000e+00 lowCoverage 0.15914635 2.4922e-02 lowCoverage 3.4866e-01 lowCoverage 0.844347 0.853577 -0.0049927 4 0.85112 0.841373 0.00974605 5.2560e-01 5.0101e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 5.4158e-01 7.6547e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0854071 4.2815e-01 lowCoverage 1.00000000 lowCoverage 0.898293 0.653088 0.2500150 5 0.905619 0.662431 0.2431884 8.1734e-09 1.0000e+00 hypermethylated 2.1509e-07 1.0000e+00 hypermethylated 5.1009e-03 9.9883e-01 weaklyHypermeth 7.1094e-02 1.0000e+00 weaklyHypermeth 0.2205072 6.4898e-03 lowCoverage 1.3753e-01 lowCoverage 0.898293 0.853577 0.04739123 5 0.905619 0.841373 0.0642465 4.7818e-02 9.8707e-01 weaklyHypermeth 9.9621e-01 1.0000e+00 insignificant 3.5812e-02 9.9885e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.1467680 2.0223e-01 lowCoverage 1.000000 lowCoverage 0.653088 0.853577 -0.1835994 5 0.662431 0.841373 -0.1789419 0.99888646 1.1871e-02 weaklyHypometh 1.000000 1.1991e-01 insignificant 0.9015375 5.8996e-01 insignificant 1 1.0000e+00 insignificant -0.0737392 5.2259e-01 lowCoverage 1.0000000 lowCoverage chr5 175760650 175761650 22674 HIGD2A ENSG00000146066 0.610758 135 5 0.533471 159 5 0.54303 56 5 0.662608 153 5 0.844444 45 5 0.69182 89 5 0.641847 54 5 0.633333 69 5 0.666667 15 0 0.523810 26 4 0.599471 116 5 0.800000 8 0 0.658333 44 5 0.616667 20 1 0.700000 16 1 0.700000 7 0 0.500000 4 0 0.594982 63 5 0.713333 34 5 0.65718 63 5 0.800000 10 1 0.685185 17 1 0.688986 86 5 0.666667 32 4 0.445854 55 3 0.653333 123 5 0.555556 11 0 0.666667 7 1 0.571429 21 1 0.687608 128 5 0.696061 107 5 0.633333 36 5 0.6367150 94 5 0.4385380 88 5 0.2590909 42 4 0.5650000 60 5 0.5300000 37 4 0.702074 116 5 0.67629 79 5 0.674176 136 5 0.609342 93 5 0.647222 42 5 0.668818 133 5 0.686086 0.606595 0.610495 0.737522 0.875339 0.761537 0.667582 0.668990 0.780488 0.667828 0.719641 0.878049 0.747764 0.689024 0.804878 0.731707 0.682215 0.684714 0.792683 0.725447 0.878049 0.621341 0.779549 0.776571 0.566805 0.729901 0.564430 0.710772 0.679443 0.783804 0.789357 0.686992 0.7013079 0.400599 0.4372825 0.64817073 0.612369 0.7856140 0.767321 0.766330 0.692250 0.736450 0.728845 0 0.628401 0.676145 -0.03251779 5 0.62572 0.656195 -0.03047178 9.1172e-01 1.5422e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.1078e-01 5.9686e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00130200 0.96798382 lowCoverage 1.00000 lowCoverage 0.628401 0.599542 0.04253869 5 0.62572 0.582291 0.04343214 2.0235e-01 9.6625e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.4539e-02 9.9672e-01 weaklyHypermeth 3.0565e-01 1.0000e+00 insignificant 0.12268493 1.1751e-01 lowCoverage 1.0000e+00 lowCoverage 0.628401 0.660455 -0.0365130 5 0.62572 0.660202 -0.03447864 8.8189e-01 1.5321e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.9109e-01 4.1925e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0105826 6.5182e-01 lowCoverage 1.00000000 lowCoverage 0.676145 0.599542 0.0779844 5 0.656195 0.582291 0.0739039 5.5921e-02 9.7695e-01 insignificant 3.8834e-01 1.0000e+00 insignificant 6.1182e-02 9.8908e-01 insignificant 4.9341e-01 1.0000e+00 insignificant 0.1239869 1.1811e-01 lowCoverage 1.0000e+00 lowCoverage 0.676145 0.660455 -0.00476447 5 0.656195 0.660202 -0.0040069 7.0281e-01 5.7918e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.4002e-01 8.4210e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0092806 7.4912e-01 lowCoverage 1.000000 lowCoverage 0.599542 0.660455 -0.0808670 5 0.582291 0.660202 -0.0779108 0.97399770 9.1780e-02 insignificant 1.000000 6.2014e-01 insignificant 0.9726768 3.8716e-02 weaklyHypometh 1 4.1631e-01 insignificant -0.1332676 9.3155e-02 lowCoverage 0.8600749 lowCoverage chr5 175797350 175798350 22675 CLTB ENSG00000175416 0.651605 117 6 0.749590 102 6 0.55556 37 6 0.687020 121 6 0.638889 29 2 0.78920 234 6 0.904762 19 2 0.754058 52 6 0.823413 41 6 0.744444 28 3 0.646276 248 6 0.666667 6 0 0.800926 53 6 0.586111 27 2 0.656746 26 1 0.533333 18 2 NA 0 0 0.721691 99 6 0.694444 54 6 0.77684 89 6 0.762963 38 4 0.500000 2 0 0.580495 56 6 0.739899 43 5 0.773810 64 5 0.739476 101 6 0.825499 99 4 0.632937 35 4 0.727558 75 6 0.717477 91 6 0.623485 108 6 0.643519 65 6 0.7426692 69 6 0.4724747 67 6 0.6361111 93 6 0.6666667 6 0 0.4605159 72 6 0.758626 91 6 0.74272 115 6 0.702222 80 6 0.731602 152 6 0.733333 44 6 0.679167 89 6 0.654379 0.702067 0.468391 0.675671 0.655172 0.765411 0.852217 0.738748 0.801314 0.729310 0.739667 0.637931 0.760057 0.594828 0.663383 0.551724 NA 0.723313 0.820402 0.748189 0.735632 0.605669 0.618010 0.679728 0.767241 0.733205 0.788240 0.597291 0.723367 0.682585 0.601097 0.658046 0.6791548 0.520376 0.7006226 0.67039651 0.456034 0.6787623 0.728126 0.703879 0.724362 0.729885 0.696983 0 0.734286 0.719434 0.01987824 6 0.63385 0.756963 -0.12311620 2.4399e-01 8.9356e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.9915e-01 8.6312e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01536729 0.66134142 lowCoverage 1.00000 lowCoverage 0.734286 0.648241 0.08849170 6 0.63385 0.631470 0.00237678 9.5461e-04 9.5528e-01 weaklyHypermeth 9.1789e-03 1.0000e+00 weaklyHypermeth 2.4081e-02 9.6902e-01 weaklyHypermeth 2.3380e-01 1.0000e+00 insignificant 0.08144982 1.9865e-01 lowCoverage 1.0000e+00 lowCoverage 0.735863 0.712500 0.0182743 6 0.73949 0.718564 0.02092381 3.7427e-01 5.4412e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.2096e-01 4.4730e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0135154 5.9113e-01 lowCoverage 1.00000000 lowCoverage 0.719434 0.648241 0.0679277 6 0.756963 0.631470 0.1254930 3.7407e-03 9.7228e-01 weaklyHypermeth 3.4318e-02 1.0000e+00 weaklyHypermeth 5.4574e-02 9.8966e-01 insignificant 4.4732e-01 1.0000e+00 insignificant 0.0660825 2.9895e-01 lowCoverage 1.0000e+00 lowCoverage 0.719072 0.712500 -0.00003011 6 0.716457 0.718564 -0.0021073 6.1203e-01 1.8227e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.8337e-01 1.3988e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0288827 3.4242e-01 lowCoverage 1.000000 lowCoverage 0.648990 0.712500 -0.0750764 6 0.653382 0.718564 -0.0651824 0.86605293 9.1001e-03 weaklyHypometh 1.000000 9.7851e-02 weaklyHypometh 0.9706534 8.7636e-03 weaklyHypometh 1 1.3080e-01 insignificant -0.0949652 1.3468e-01 insignificant 1.0000000 insignificant chr5 175979150 175980150 22677 GPRIN1 ENSG00000169258 0.588960 630 27 0.244230 841 25 0.34393 972 26 0.100763 674 23 0.171915 680 19 0.40413 989 26 0.128587 894 27 0.611347 679 23 0.356438 696 27 0.187516 956 27 0.381873 1030 25 0.455256 555 25 0.517295 566 25 0.193136 484 16 0.428870 801 27 0.380651 436 25 0.117985 173 11 0.268234 747 25 0.034573 880 23 0.13344 819 24 0.392236 358 22 0.026356 478 23 0.229208 604 25 0.133919 559 25 0.140825 314 19 0.125341 1087 27 0.197744 812 24 0.452768 356 20 0.295153 628 21 0.036461 1077 27 0.217610 837 25 0.667161 689 26 0.1401002 782 25 0.0367949 558 24 0.0520683 861 21 0.0908469 194 12 0.2248636 617 19 0.049680 1081 23 0.51954 761 24 0.265717 654 23 0.050904 545 25 0.444570 788 25 0.163589 760 23 0.588557 0.292450 0.374074 0.124643 0.201318 0.459693 0.134804 0.685170 0.370854 0.230064 0.373630 0.492679 0.580627 0.213174 0.447845 0.413534 0.191399 0.322610 0.052291 0.177706 0.310990 0.030582 0.277903 0.092614 0.135728 0.123150 0.212098 0.521595 0.381152 0.053364 0.239432 0.703439 0.1543739 0.072517 0.0091384 0.06719304 0.149429 0.0155513 0.521316 0.310614 0.081742 0.468322 0.219586 21 0.319310 0.237497 0.08237464 23 0.28838 0.265599 0.02277670 7.1775e-05 1.0000e+00 weaklyHypermeth 3.5887e-02 1.0000e+00 weaklyHypermeth 1.0931e-06 1.0000e+00 weaklyHypermeth 5.4656e-04 1.0000e+00 weaklyHypermeth 0.05955802 0.37309606 insignificant 1.00000 insignificant 0.319354 0.065005 0.25843909 25 0.30826 0.123057 0.18520737 4.9580e-32 1.0000e+00 hypermethylated 4.5073e-30 1.0000e+00 hypermethylated 4.7532e-27 1.0000e+00 hypermethylated 1.1883e-24 1.0000e+00 hypermethylated 0.20339759 3.8309e-04 hypermethylated 1.6667e-02 hypermethylated 0.319117 0.319270 -0.0079213 23 0.29935 0.313643 -0.01429092 9.2032e-01 7.3533e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.8864e-01 9.9218e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0135932 8.9072e-01 insignificant 1.00000000 insignificant 0.237558 0.065233 0.1694438 23 0.291119 0.152288 0.1388312 9.2358e-10 1.0000e+00 weaklyHypermeth 2.7987e-08 1.0000e+00 weaklyHypermeth 5.4722e-11 1.0000e+00 weaklyHypermeth 6.0802e-09 1.0000e+00 weaklyHypermeth 0.1438396 3.2029e-02 weaklyHypermeth 4.3282e-01 insignificant 0.237129 0.319270 -0.08822329 23 0.227170 0.313643 -0.0864737 1.0000e+00 1.0028e-02 weaklyHypometh 1.0000e+00 4.3601e-01 insignificant 9.9997e-01 9.1091e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0459648 6.6501e-01 insignificant 1.000000 insignificant 0.064137 0.319270 -0.2638588 23 0.076617 0.313643 -0.2370269 1.00000000 2.0493e-21 hypomethylated 1.000000 2.9276e-19 hypomethylated 1.0000000 1.4884e-12 hypomethylated 1 2.4806e-10 hypomethylated -0.1898044 9.3748e-02 insignificant 0.8600749 insignificant chr5 176009050 176010050 22678 TSPAN17 ENSG00000048140 0.913504 127 6 0.947303 76 6 0.97917 38 4 0.929989 55 6 0.916667 12 0 0.83413 85 6 0.833333 18 0 1.000000 38 6 0.893519 44 5 0.955357 47 6 0.899370 106 6 0.666667 9 0 0.792460 60 6 NA 0 0 1.000000 12 0 0.875000 5 0 0.000000 2 0 0.969952 138 6 0.962963 48 6 0.90606 144 6 0.920635 46 6 0.858333 48 5 0.949860 89 6 0.482937 51 6 0.962963 50 6 0.921429 67 6 0.831602 78 6 0.833333 10 0 0.955357 36 5 0.924837 84 6 0.950000 55 6 0.868328 169 6 0.9277056 55 6 0.9219577 74 6 0.9772727 131 6 0.8333333 17 1 0.8972222 39 3 0.944444 50 6 0.96667 34 4 0.924938 144 6 0.953466 73 6 0.783838 59 6 0.883747 127 9 0.925945 0.955881 0.982558 0.934939 0.930233 0.980103 0.813953 1.000000 0.895995 0.950997 0.906540 0.534884 0.779734 NA 0.986169 0.869890 NA 0.967911 0.968992 0.952292 0.928018 0.881395 0.943958 0.436877 0.968992 0.915615 0.821806 0.790597 0.965947 0.925445 0.958140 0.941078 0.9427967 0.930602 0.9725159 0.81395349 0.905039 0.9573643 0.972093 0.929406 0.929835 0.928400 0.880761 0 0.928504 0.890026 0.03817100 6 0.88821 0.934269 -0.04606238 3.2106e-01 9.8562e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.4711e-01 9.9032e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01503255 0.81478725 lowCoverage 1.00000 lowCoverage 0.930410 0.939891 -0.01233551 6 0.93034 0.939935 -0.00959028 7.5404e-01 3.0632e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.4346e-01 5.2851e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.06038745 2.8243e-01 lowCoverage 1.0000e+00 lowCoverage 0.928504 0.915138 0.0129844 6 0.88821 0.909246 -0.02103888 6.2562e-01 9.1316e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.0080e-01 8.8610e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0459293 4.5823e-01 lowCoverage 1.00000000 lowCoverage 0.889032 0.939891 -0.0521270 6 0.890449 0.939935 -0.0494863 9.7258e-01 9.7820e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4840e-01 1.7694e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0453549 3.0597e-01 lowCoverage 1.0000e+00 lowCoverage 0.890026 0.915138 -0.02818319 6 0.934269 0.909246 0.0250235 9.4089e-01 8.8085e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3702e-01 7.3396e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0308968 5.4865e-01 insignificant 1.000000 insignificant 0.939891 0.917275 0.0279192 6 0.939935 0.911243 0.0286922 0.25645583 9.2764e-01 insignificant 1.000000 1.0000e+00 insignificant 0.5899275 7.6017e-01 insignificant 1 1.0000e+00 insignificant 0.0144581 7.1856e-01 lowCoverage 1.0000000 lowCoverage chr5 176356250 176357250 22685 HK3 ENSG00000160883 0.766662 192 5 0.674681 176 5 0.75500 80 5 0.819062 231 5 0.824901 73 5 0.56832 304 5 0.562812 63 5 0.861310 150 5 0.862222 65 5 0.906763 61 5 0.813854 220 5 0.766667 29 5 0.895238 64 5 0.785714 54 5 0.844444 95 5 0.750000 6 0 0.666667 12 0 0.787933 292 5 0.794169 171 5 0.89592 197 5 0.888889 37 4 0.703704 83 5 0.768826 113 5 0.700980 82 5 0.683737 122 5 0.887566 129 5 0.843041 113 4 0.628571 40 4 0.732340 129 5 0.651872 198 5 0.812276 159 5 0.606422 284 5 0.7785714 94 5 0.7373313 133 5 0.7915837 270 5 0.6666667 16 2 0.7276768 60 5 0.864377 196 5 0.77692 146 5 0.710627 182 5 0.632400 187 5 0.833333 73 5 0.786981 195 5 0.782484 0.750160 0.694412 0.808700 0.747322 0.812532 0.792122 0.849083 0.847106 0.872523 0.828821 0.784254 0.910459 0.816280 0.852761 0.792995 0.760275 0.783604 0.787634 0.886710 0.895024 0.883095 0.776877 0.876344 0.792260 0.848103 0.805024 0.853170 0.767595 0.791566 0.816365 0.793584 0.8022203 0.763118 0.9128923 0.77943271 0.758257 0.8479067 0.756500 0.810444 0.780250 0.804557 0.795360 4 0.798422 0.796508 -0.00859314 5 0.75202 0.649085 0.10293095 1.6669e-01 5.7473e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.0015e-01 6.4926e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03776478 0.30092688 lowCoverage 1.00000 lowCoverage 0.798259 0.817945 -0.04495399 5 0.73700 0.735462 0.00153558 9.3765e-01 8.0674e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 7.8817e-01 4.1059e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01908240 5.9647e-01 lowCoverage 1.0000e+00 lowCoverage 0.798422 0.748404 0.0079213 5 0.75202 0.754738 -0.00272196 5.1889e-01 6.5046e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 4.0899e-01 1.0803e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0320643 4.6069e-01 lowCoverage 1.00000000 lowCoverage 0.797170 0.817945 -0.0343242 5 0.656097 0.735462 -0.0793651 9.6477e-01 4.4970e-03 weaklyHypometh 1.0000e+00 3.7475e-01 insignificant 8.3858e-01 2.5891e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0186824 6.4165e-01 lowCoverage 1.0000e+00 lowCoverage 0.796508 0.748404 0.02477403 5 0.649085 0.754738 -0.1056529 1.5622e-01 7.6618e-03 inconclusive 1.0000e+00 3.6468e-01 insignificant 1.2865e-01 3.5042e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0057005 9.0155e-01 lowCoverage 1.000000 lowCoverage 0.817945 0.749035 0.0609251 5 0.735462 0.767319 -0.0318573 0.11690222 8.9623e-01 insignificant 1.000000 1.0000e+00 insignificant 0.6409095 8.6827e-01 insignificant 1 1.0000e+00 insignificant 0.0129819 7.7734e-01 lowCoverage 1.0000000 lowCoverage chr5 176475950 176476950 22686 FGFR4 ENSG00000160867 0.540042 811 23 0.351955 1213 33 0.53561 1014 33 0.441412 740 26 0.465420 877 34 0.43479 1425 31 0.545873 1026 30 0.518241 914 31 0.417946 888 34 0.428718 986 30 0.449860 1740 34 0.305707 878 27 0.787723 956 33 0.453034 565 18 0.516146 967 28 0.281038 889 25 0.290063 352 15 0.429426 1080 27 0.728223 1719 32 0.64833 1014 26 0.337960 567 32 0.640326 269 14 0.373281 727 31 0.349292 588 33 0.549084 312 14 0.583720 1524 33 0.450662 1159 31 0.497532 391 26 0.494215 1185 27 0.523688 1710 35 0.468706 1659 31 0.348528 1469 32 0.1789307 1087 31 0.1343890 1348 32 0.1452645 1752 33 0.1338194 244 15 0.0997406 810 32 0.191007 1713 34 0.49860 820 26 0.533453 1044 27 0.768229 599 21 0.623004 944 23 0.518433 694 24 0.464435 0.329838 0.494695 0.403316 0.445260 0.368908 0.455785 0.462960 0.370562 0.379019 0.363143 0.307639 0.756937 0.411826 0.492503 0.347113 0.370292 0.419844 0.657492 0.568260 0.325147 0.548591 0.291784 0.316954 0.454921 0.491502 0.436475 0.469817 0.463046 0.429054 0.405736 0.320383 0.1870011 0.167593 0.1614242 0.18095211 0.123999 0.2206488 0.484717 0.526052 0.747546 0.523270 0.461484 17 0.460675 0.454860 0.03158860 31 0.49802 0.427987 0.07003366 5.7574e-02 9.9997e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.7598e-01 9.9704e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01039540 0.80316163 insignificant 1.00000 insignificant 0.460568 0.187455 0.29748729 31 0.47020 0.153728 0.31646774 1.0985e-92 1.0000e+00 hypermethylated 3.6615e-90 1.0000e+00 hypermethylated 7.3558e-52 1.0000e+00 hypermethylated 7.3558e-49 1.0000e+00 hypermethylated 0.33128631 4.0261e-10 hypermethylated 6.7101e-08 hypermethylated 0.460686 0.577176 -0.0929221 23 0.50204 0.524558 -0.02251951 9.9402e-01 3.3669e-11 weaklyHypometh 1.0000e+00 6.7337e-09 weaklyHypometh 1.0000e+00 1.1012e-08 weaklyHypometh 1.0000e+00 2.7530e-06 weaklyHypometh -0.1098662 9.8821e-02 insignificant 1.00000000 insignificant 0.454805 0.187545 0.2727039 31 0.431828 0.161665 0.2701634 2.0282e-76 1.0000e+00 hypermethylated 6.7605e-74 1.0000e+00 hypermethylated 9.8583e-42 1.0000e+00 hypermethylated 4.9291e-39 1.0000e+00 hypermethylated 0.3208909 4.8451e-08 hypermethylated 8.8003e-06 hypermethylated 0.454829 0.577317 -0.12587298 23 0.430858 0.538009 -0.1071511 9.9986e-01 5.7656e-17 weaklyHypometh 1.0000e+00 2.8828e-14 weaklyHypometh 1.0000e+00 2.3624e-09 weaklyHypometh 1.0000e+00 7.8745e-07 weaklyHypometh -0.1202616 7.5569e-02 insignificant 1.000000 insignificant 0.187617 0.576970 -0.4007903 23 0.165553 0.512368 -0.3468143 1.00000000 1.8244e-71 hypomethylated 1.000000 1.8244e-68 hypomethylated 1.0000000 5.9265e-32 hypomethylated 1 5.9265e-29 hypomethylated -0.4411525 5.4101e-04 hypomethylated 0.0386435 hypomethylated chr5 176850550 176851550 22689 DBN1 ENSG00000113758 0.471082 442 22 0.465943 494 22 0.41407 694 25 0.425529 687 22 0.418699 419 25 0.57904 777 26 0.436470 662 25 0.454924 479 25 0.512297 674 26 0.321988 640 22 0.472299 737 25 0.393748 466 22 0.562473 486 26 0.554189 402 22 0.422960 528 26 0.334947 349 16 0.343537 70 6 0.463565 874 23 0.445505 765 26 0.64114 634 26 0.432082 479 25 0.545159 243 14 0.461195 438 22 0.252934 564 23 0.532383 321 21 0.510685 628 25 0.462664 735 22 0.332346 393 20 0.410924 850 25 0.438036 661 26 0.479871 568 26 0.482475 778 24 0.5804462 534 20 0.6268220 542 25 0.7180316 970 18 0.5876749 187 16 0.4753866 322 25 0.609877 674 26 0.65252 475 22 0.602339 552 22 0.581647 455 20 0.613597 605 20 0.553444 496 22 0.410268 0.252002 0.350700 0.433052 0.387295 0.364332 0.283035 0.427586 0.335845 0.317001 0.390142 0.361230 0.529592 0.412439 0.435015 0.278091 0.309757 0.423475 0.390888 0.488786 0.345797 0.515111 0.370625 0.188304 0.343027 0.434840 0.318637 0.229115 0.359689 0.445507 0.370791 0.288310 0.6203305 0.697975 0.6473197 0.60132569 0.555585 0.7231430 0.606408 0.572198 0.620492 0.518940 0.512605 14 0.414649 0.414689 0.02108352 23 0.46866 0.402784 0.06587240 1.3033e-01 9.3852e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.4039e-01 9.5821e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01165756 0.70366555 insignificant 1.00000 insignificant 0.414610 0.722515 -0.25017099 23 0.45522 0.547341 -0.09212413 8.9376e-01 4.8852e-49 hypomethylated 1.0000e+00 4.8852e-46 hypomethylated 8.3682e-01 1.5396e-12 hypomethylated 1.0000e+00 1.5396e-09 hypomethylated -0.14298588 4.1381e-03 weaklyHypometh 1.0345e-01 insignificant 0.414630 0.649632 -0.1377374 22 0.45033 0.611465 -0.16113057 9.9030e-01 1.2638e-21 weaklyHypometh 1.0000e+00 6.3192e-19 weaklyHypometh 9.9929e-01 3.8361e-11 weaklyHypometh 1.0000e+00 1.2787e-08 weaklyHypometh -0.1439887 3.1937e-05 weaklyHypometh 0.00638732 weaklyHypometh 0.414762 0.722963 -0.2563960 23 0.419301 0.562134 -0.1428329 9.7877e-01 2.2026e-33 hypomethylated 1.0000e+00 2.2026e-30 hypomethylated 9.6733e-01 3.0552e-11 hypomethylated 1.0000e+00 3.0552e-08 hypomethylated -0.1546434 2.8005e-03 weaklyHypometh 8.2367e-02 weaklyHypometh 0.416011 0.649497 -0.15383383 22 0.442734 0.600037 -0.1573032 9.8562e-01 2.2913e-17 weaklyHypometh 1.0000e+00 2.2913e-14 weaklyHypometh 9.9841e-01 7.5003e-12 weaklyHypometh 1.0000e+00 4.0007e-09 weaklyHypometh -0.1556462 8.6677e-05 weaklyHypometh 0.021669 weaklyHypometh 0.725741 0.649884 0.0731772 22 0.569542 0.629449 -0.0599065 0.00032434 7.5412e-01 weaklyHypermeth 0.046334 1.0000e+00 weaklyHypermeth 0.0466289 6.8605e-01 weaklyHypermeth 1 1.0000e+00 insignificant -0.0010028 9.7855e-01 insignificant 1.0000000 insignificant chr5 177442250 177443250 22699 ENSG00000218227 0.818212 279 9 0.709114 241 9 0.60092 144 9 0.660410 269 9 0.697606 123 9 0.49031 448 9 0.618986 179 9 0.746884 165 9 0.748923 152 9 0.640807 118 7 0.697847 331 9 0.585408 70 4 0.655572 231 9 0.814316 94 9 0.743802 168 9 0.550000 42 5 0.890317 35 4 0.513201 282 9 0.728060 142 9 0.61281 364 9 0.758267 69 7 0.748613 157 9 0.841190 169 9 0.676202 126 8 0.681989 89 9 0.687055 284 9 0.742555 135 9 0.672351 101 6 0.557876 200 10 0.697859 251 9 0.705480 216 9 0.688645 432 9 0.6383744 287 10 0.5920567 152 9 0.7459336 284 7 0.6111111 24 1 0.5767478 150 9 0.703687 280 9 0.77290 257 9 0.661822 292 9 0.758388 252 9 0.737571 232 10 0.674842 285 9 0.818195 0.752980 0.687120 0.846941 0.749945 0.759489 0.693928 0.791135 0.782912 0.784609 0.812841 0.695447 0.739257 0.825376 0.743414 0.606032 0.879158 0.725688 0.805780 0.753081 0.760236 0.732207 0.824742 0.828899 0.806086 0.796636 0.790432 0.787500 0.795389 0.814980 0.817396 0.787807 0.6881309 0.661202 0.7242454 0.68097015 0.677190 0.7901037 0.789929 0.780581 0.770122 0.725715 0.804438 5 0.732009 0.762674 -0.03106095 9 0.64126 0.656728 -0.01546522 9.8227e-01 5.3243e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9014e-01 3.3158e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.02866524 0.35050642 insignificant 1.00000 insignificant 0.732009 0.681393 0.02203830 9 0.64126 0.665903 -0.02464013 3.1487e-02 9.4077e-01 weaklyHypermeth 2.3324e-01 1.0000e+00 insignificant 3.9106e-01 8.3781e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03152311 3.9450e-01 insignificant 1.0000e+00 insignificant 0.733902 0.790592 -0.0100783 9 0.68707 0.687402 -0.00033531 8.4485e-01 3.6919e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.1752e-01 5.6809e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0449297 1.8526e-01 insignificant 1.00000000 insignificant 0.762674 0.681393 0.0550028 9 0.656728 0.665903 -0.0091749 2.0309e-02 8.9298e-01 weaklyHypermeth 1.5623e-01 1.0000e+00 insignificant 1.3064e-01 9.9109e-01 insignificant 9.2655e-01 1.0000e+00 insignificant 0.0601884 1.0151e-01 insignificant 9.3993e-01 insignificant 0.765210 0.790592 0.01876418 9 0.689351 0.687402 0.0019488 2.9376e-01 4.6874e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.6914e-01 7.8390e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0162644 5.9415e-01 insignificant 1.000000 insignificant 0.681122 0.790592 -0.0339596 9 0.642039 0.687402 -0.0453637 0.91907687 7.7290e-02 insignificant 1.000000 5.4049e-01 insignificant 0.9866933 4.1671e-01 insignificant 1 1.0000e+00 insignificant -0.0764528 5.8449e-02 insignificant 0.6353111 insignificant chr5 177809250 177810250 22706 ENSG00000208379,ENSG00000223150 0.912322 597 9 0.908466 397 9 0.88895 338 9 0.926137 625 9 0.941188 186 9 0.90939 600 9 0.897668 295 9 0.908432 278 9 0.926792 302 9 0.931355 240 8 0.895974 452 9 0.910961 122 9 0.925802 308 9 0.850882 149 9 0.953111 296 9 0.939208 177 9 0.930322 129 7 0.898752 598 9 0.960027 197 9 0.93264 467 9 0.941465 106 6 0.931340 201 8 0.930796 231 8 0.837480 208 9 0.933681 217 8 0.933299 390 9 0.883405 199 9 0.915216 136 9 0.929402 236 9 0.943399 520 9 0.952237 410 9 0.946949 505 9 0.7315991 328 9 0.5465499 238 8 0.8163265 129 7 0.7881034 82 5 0.5850783 265 9 0.734277 425 9 0.94443 490 9 0.900234 466 9 0.887615 592 9 0.862230 387 8 0.820814 611 9 0.915196 0.906010 0.894432 0.924557 0.923359 0.914995 0.904781 0.925148 0.919693 0.929957 0.887059 0.896043 0.920777 0.860025 0.937664 0.913070 0.926997 0.888902 0.958144 0.929684 0.947950 0.932716 0.924808 0.926282 0.929252 0.938745 0.890716 0.898378 0.928219 0.944056 0.954344 0.940068 0.7218071 0.623267 0.7389732 0.77610295 0.672709 0.7074563 0.928296 0.889266 0.907632 0.844158 0.875560 8 0.912631 0.929997 -0.01938825 9 0.91536 0.931346 -0.01598609 9.9185e-01 9.6601e-03 weaklyHypometh 1.0000e+00 4.9669e-01 insignificant 9.5954e-01 1.8198e-02 weaklyHypometh 1.0000e+00 9.8127e-01 insignificant -0.00580343 0.59945598 insignificant 1.00000 insignificant 0.912631 0.666667 0.24607703 9 0.91536 0.707929 0.20743096 3.2040e-26 9.5605e-01 hypermethylated 2.1360e-24 1.0000e+00 hypermethylated 1.4551e-07 9.1147e-01 hypermethylated 6.9290e-06 1.0000e+00 hypermethylated 0.21709641 4.4728e-03 weaklyHypermeth 1.0649e-01 insignificant 0.912631 0.895833 0.0245400 9 0.91536 0.896729 0.01863075 5.3068e-02 8.8961e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.8890e-02 9.6205e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.0343550 1.7137e-01 insignificant 1.00000000 insignificant 0.929720 0.666439 0.2626644 9 0.838211 0.687136 0.1510753 5.1415e-19 9.8994e-01 hypermethylated 2.8564e-17 1.0000e+00 hypermethylated 4.8715e-08 9.6434e-01 hypermethylated 3.2476e-06 1.0000e+00 hypermethylated 0.2228998 3.6573e-03 weaklyHypermeth 1.0110e-01 insignificant 0.929720 0.895874 0.04567368 9 0.838211 0.907056 -0.0688448 3.9828e-04 9.9521e-01 weaklyHypermeth 2.6552e-02 1.0000e+00 weaklyHypermeth 4.1710e-03 9.8362e-01 weaklyHypermeth 2.6069e-01 1.0000e+00 insignificant 0.0401585 1.2687e-01 insignificant 1.000000 insignificant 0.666667 0.895522 -0.2201863 9 0.715578 0.824596 -0.1090184 0.97822352 1.2121e-06 hypomethylated 1.000000 4.0403e-05 hypomethylated 0.8264418 7.1312e-04 hypomethylated 1 1.9687e-02 hypomethylated -0.1827414 7.6975e-03 weaklyHypometh 0.2189448 insignificant chr5 178145750 178146750 22711 ENSG00000216118 0.843587 156 5 0.753829 220 5 0.51429 95 5 0.905435 106 5 0.666471 57 4 0.91795 265 5 0.741188 108 4 0.732941 121 5 0.877500 53 5 0.750000 22 1 0.774205 224 5 0.675000 22 2 0.708506 69 3 0.937374 31 4 0.893333 26 4 0.958333 16 2 NA 0 0 0.636667 160 3 0.887323 261 3 0.78031 231 5 0.980392 64 5 0.785714 14 2 0.746868 127 5 0.928571 56 5 0.926190 43 2 0.919577 243 5 0.836190 53 5 0.683333 13 1 0.915563 179 5 0.796855 214 5 0.871272 259 5 0.862935 186 5 0.3892587 194 5 0.2220596 137 5 0.4641026 140 4 NA 0 0 0.4223412 130 5 0.445410 286 5 0.79845 124 5 0.830804 199 5 0.964349 105 4 0.625287 67 2 0.545979 198 5 0.811765 0.771061 0.522352 0.873225 0.828451 0.953849 0.706672 0.735595 0.880782 0.602041 0.703851 0.826531 0.767112 0.961657 0.900680 0.927277 NA 0.585941 0.889712 0.831570 0.985594 0.803591 0.697062 0.956268 0.883117 0.876093 0.884742 0.793457 0.962219 0.820443 0.915612 0.867761 0.3772793 0.182010 0.3835688 NA 0.403282 0.4495937 0.813827 0.851261 0.966168 0.580108 0.519793 0 0.781988 0.861974 -0.08127781 5 0.78689 0.857828 -0.07093650 9.9784e-01 2.3498e-03 weaklyHypometh 1.0000e+00 1.9581e-01 insignificant 9.9239e-01 8.2018e-03 weaklyHypometh 1.0000e+00 6.8349e-01 insignificant -0.06739005 0.08021969 lowCoverage 1.00000 lowCoverage 0.781988 0.354802 0.41223324 5 0.78689 0.348012 0.43887937 2.8796e-20 1.0000e+00 hypermethylated 1.5998e-18 1.0000e+00 hypermethylated 3.2776e-08 1.0000e+00 hypermethylated 1.7251e-06 1.0000e+00 hypermethylated 0.39843073 7.6526e-05 lowCoverage 4.7829e-03 lowCoverage 0.781988 0.751445 0.0287750 5 0.78689 0.739381 0.04751056 1.3913e-01 9.1056e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.4206e-01 7.6908e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0340914 6.8598e-01 lowCoverage 1.00000000 lowCoverage 0.861974 0.354802 0.4957361 5 0.857828 0.348012 0.5098159 4.5263e-22 1.0000e+00 hypermethylated 3.7719e-20 1.0000e+00 hypermethylated 7.8142e-09 1.0000e+00 hypermethylated 6.0109e-07 1.0000e+00 hypermethylated 0.4658208 3.9765e-05 lowCoverage 3.0588e-03 lowCoverage 0.861974 0.751445 0.11147423 5 0.857828 0.739381 0.1184471 2.9925e-03 9.9994e-01 weaklyHypermeth 1.2469e-01 1.0000e+00 insignificant 4.7071e-02 9.9821e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.1014815 2.5568e-01 lowCoverage 1.000000 lowCoverage 0.354402 0.751804 -0.3873282 5 0.290010 0.782817 -0.4928073 1.00000000 1.7285e-06 hypomethylated 1.000000 5.2537e-05 hypomethylated 1.0000000 4.7600e-04 hypomethylated 1 1.4424e-02 hypomethylated -0.3643393 4.8257e-03 lowCoverage 0.1887867 lowCoverage chr5 178625150 178626150 22714 ZNF354C ENSG00000177932 0.516354 760 24 0.420597 487 22 0.62791 430 22 0.502882 429 22 0.305646 234 11 0.71943 587 24 0.398946 703 23 0.604948 504 24 0.516088 503 22 0.570895 281 12 0.513438 727 24 0.554187 386 19 0.180936 842 24 0.827300 67 3 0.466668 536 21 0.495103 226 14 0.387529 304 20 0.409640 418 24 0.448406 642 24 0.49823 647 22 0.694504 320 22 0.353878 324 22 0.605117 395 21 0.599116 276 23 0.653159 250 20 0.715924 475 22 0.566007 344 21 0.528846 197 15 0.543111 519 22 0.489016 559 22 0.459102 760 20 0.764299 822 24 0.0024227 611 24 0.0132399 659 24 0.0564516 355 15 0.0144928 390 23 0.0069734 253 18 0.023556 915 24 0.40690 647 22 0.367171 747 24 0.286446 370 18 0.304322 990 21 0.263865 436 19 0.530753 0.434335 0.612097 0.516941 0.336189 0.746103 0.432153 0.594585 0.510605 0.552537 0.523637 0.546203 0.193550 NA 0.446492 0.562434 0.434981 0.422849 0.458465 0.495827 0.682834 0.322761 0.582887 0.623386 0.582876 0.731783 0.570181 0.609727 0.595205 0.468782 0.494911 0.788911 0.0023971 0.014380 0.0341446 0.01657801 0.013854 0.0263237 0.362662 0.312252 0.301134 0.288259 0.209355 10 0.489653 0.624046 -0.11962284 24 0.47993 0.589566 -0.10963360 1.0000e+00 7.8573e-15 weaklyHypometh 1.0000e+00 7.8573e-12 weaklyHypometh 1.0000e+00 9.5971e-09 weaklyHypometh 1.0000e+00 9.5971e-06 weaklyHypometh -0.08274979 0.08336015 insignificant 1.00000 insignificant 0.489598 0.020434 0.47403651 24 0.45833 0.012240 0.44608696 2.3171e-104 1.0000e+00 hypermethylated 2.3171e-101 1.0000e+00 hypermethylated 1.9878e-49 1.0000e+00 hypermethylated 9.9392e-47 1.0000e+00 hypermethylated 0.47873416 1.1493e-12 hypermethylated 2.8733e-10 hypermethylated 0.489649 0.293103 0.1842458 22 0.47742 0.347939 0.12948453 5.4922e-15 9.8241e-01 weaklyHypermeth 2.7461e-12 1.0000e+00 weaklyHypermeth 3.1252e-15 9.9770e-01 weaklyHypermeth 3.1252e-12 1.0000e+00 weaklyHypermeth 0.1725155 6.5861e-04 weaklyHypermeth 0.04704322 weaklyHypermeth 0.624332 0.020427 0.6014327 24 0.612241 0.011769 0.6004724 8.9731e-110 1.0000e+00 hypermethylated 8.9731e-107 1.0000e+00 hypermethylated 4.5999e-45 1.0000e+00 hypermethylated 4.5999e-42 1.0000e+00 hypermethylated 0.5614840 1.3161e-09 hypermethylated 3.2904e-07 hypermethylated 0.624427 0.293103 0.29863359 22 0.607706 0.347939 0.2597668 1.8767e-29 1.0000e+00 hypermethylated 1.8767e-26 1.0000e+00 hypermethylated 2.0473e-20 1.0000e+00 hypermethylated 2.0473e-17 1.0000e+00 hypermethylated 0.2552653 3.5543e-05 hypermethylated 0.011848 hypermethylated 0.020447 0.293103 -0.2864750 22 0.012750 0.347939 -0.3351894 1.00000000 9.3099e-62 hypomethylated 1.000000 4.6549e-59 hypomethylated 1.0000000 3.5604e-25 hypomethylated 1 1.7802e-22 hypomethylated -0.3062187 1.5107e-04 hypomethylated 0.0164513 hypomethylated chr5 178971850 178972850 22715 RUFY1 ENSG00000176783 0.838644 747 21 0.741324 332 19 0.73548 224 15 0.923190 723 19 0.829044 131 9 0.72445 784 22 0.782849 285 9 0.845369 229 15 0.857821 94 8 0.770070 173 16 0.865370 476 20 0.823923 99 8 0.923716 144 10 0.724702 66 7 0.727183 143 16 0.466667 90 7 0.820118 340 16 0.869645 518 20 0.907888 378 16 0.81794 658 21 0.906433 84 9 0.915279 203 15 0.878694 278 19 0.914623 136 15 0.875030 364 14 0.878905 601 19 0.878408 156 13 0.938435 140 6 0.818047 284 14 0.761973 558 22 0.866139 542 18 0.796518 764 20 0.7606974 316 19 0.8315801 327 15 0.7319969 288 18 0.8195497 285 14 0.8022760 239 14 0.744814 602 20 0.87542 558 19 0.921727 628 19 0.928171 736 20 0.917042 504 19 0.900113 762 20 0.916743 0.821315 0.831043 0.931820 0.842572 0.873421 0.885006 0.903356 0.914067 0.928574 0.865851 0.926821 0.906035 0.846751 0.901478 0.731890 0.889869 0.901809 0.930608 0.883380 0.935367 0.898112 0.883620 0.902078 0.880250 0.942709 0.889385 0.950599 0.866014 0.923971 0.902500 0.881057 0.8431802 0.806767 0.8652697 0.90885182 0.904140 0.8378289 0.926781 0.927128 0.930637 0.930641 0.908838 3 0.878336 0.899464 -0.00691907 18 0.82413 0.850079 -0.02595294 9.7779e-01 8.9426e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9945e-01 5.3017e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.06927040 0.01673858 weaklyHypometh 1.00000 insignificant 0.878299 0.849295 0.04191656 19 0.81200 0.704452 0.10754408 1.1243e-03 9.9867e-01 weaklyHypermeth 1.0607e-02 1.0000e+00 weaklyHypermeth 1.3827e-02 9.9942e-01 weaklyHypermeth 1.5713e-01 1.0000e+00 insignificant 0.01795091 5.3378e-01 insignificant 1.0000e+00 insignificant 0.878281 0.921581 -0.0316850 18 0.80528 0.919214 -0.11393174 9.9998e-01 1.7547e-04 weaklyHypometh 1.0000e+00 1.4506e-02 weaklyHypometh 9.9207e-01 1.0078e-02 weaklyHypometh 1.0000e+00 3.4750e-01 insignificant -0.1087244 2.0495e-04 weaklyHypometh 0.02854523 weaklyHypometh 0.899635 0.849295 0.0520005 18 0.856981 0.704452 0.1525283 8.9326e-05 9.9996e-01 weaklyHypermeth 1.2761e-03 1.0000e+00 weaklyHypermeth 9.2665e-05 1.0000e+00 weaklyHypermeth 2.5740e-03 1.0000e+00 weaklyHypermeth 0.0872213 2.1758e-03 weaklyHypermeth 6.7993e-02 weaklyHypermeth 0.899829 0.921581 -0.02036721 18 0.869730 0.919214 -0.0494838 9.9960e-01 9.9353e-04 weaklyHypometh 1.0000e+00 9.9353e-02 weaklyHypometh 9.5583e-01 3.5972e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0394540 4.2835e-02 weaklyHypometh 1.000000 insignificant 0.849708 0.921581 -0.0672353 18 0.729611 0.919214 -0.1896024 0.99999997 2.2147e-09 weaklyHypometh 1.000000 1.0546e-07 weaklyHypometh 1.0000000 1.0297e-04 weaklyHypometh 1 4.1187e-03 weaklyHypometh -0.1266753 2.1946e-04 weaklyHypometh 0.0182882 weaklyHypometh chr5 179131150 179132150 22721 MAML1 ENSG00000161021 0.776080 240 5 0.545810 107 5 0.71131 27 3 0.751454 175 6 0.599610 76 5 0.89870 159 6 0.701814 54 6 0.745000 55 4 0.588435 46 5 0.597558 57 5 0.710175 128 5 0.300000 14 0 0.660215 108 5 0.647778 63 5 0.655612 46 5 0.541667 31 3 0.733333 13 0 0.714183 172 6 0.790404 41 3 0.70484 152 5 0.771429 24 1 0.822222 43 3 0.585038 154 5 0.694697 46 3 0.799145 47 4 0.629762 103 5 0.473958 50 3 0.831818 21 1 0.617013 72 5 0.841993 94 3 0.868543 111 4 0.813686 126 3 0.4810905 90 5 0.6619048 53 5 0.6948529 46 3 0.9166667 10 0 0.8274510 67 3 0.842949 81 3 0.57429 189 6 0.627548 264 6 0.705214 228 6 0.705536 200 5 0.815115 168 5 0.717967 0.810971 0.630647 0.787396 0.770385 0.856739 0.727818 0.773504 0.766941 0.780671 0.813837 0.394231 0.683839 0.742877 0.853480 0.541667 0.773504 0.727272 0.795455 0.808287 0.728938 0.817664 0.721788 0.790909 0.846811 0.774451 0.717664 0.787091 0.680198 0.813818 0.830605 0.783262 0.6434417 0.700244 0.8069382 0.93253968 0.727300 0.8106509 0.775489 0.811221 0.845420 0.733299 0.857800 1 0.707483 0.728298 0.00289024 5 0.66240 0.570721 0.09167944 4.6258e-01 8.0585e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.6194e-01 3.1430e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.06040997 0.19862788 lowCoverage 1.00000 lowCoverage 0.707719 0.637681 0.07345248 3 0.68270 0.547059 0.13564116 1.4928e-02 7.0553e-01 lowCoverage 1.1942e-01 1.0000e+00 lowCoverage 4.0804e-01 2.3864e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.06878698 3.5934e-01 lowCoverage 1.0000e+00 lowCoverage 0.707483 0.753098 -0.0503920 5 0.66240 0.676142 -0.01374115 8.4672e-01 1.2056e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.9279e-01 2.5086e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0168409 7.4101e-01 lowCoverage 1.00000000 lowCoverage 0.730337 0.639769 0.0727839 3 0.713649 0.637648 0.0760014 9.7935e-02 9.4205e-01 lowCoverage 6.4858e-01 1.0000e+00 lowCoverage 7.4833e-01 9.2387e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0083770 9.1256e-01 lowCoverage 1.0000e+00 lowCoverage 0.728298 0.753098 -0.05507816 5 0.570721 0.676142 -0.1054206 9.7347e-01 2.0995e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.8051e-01 6.8681e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0435691 4.4323e-01 lowCoverage 1.000000 lowCoverage 0.637681 0.752863 -0.1349943 3 0.547059 0.635659 -0.0886000 0.90573382 1.5764e-02 lowCoverage 1.000000 1.5304e-01 lowCoverage 0.3374971 8.1131e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.0519461 5.1471e-01 lowCoverage 1.0000000 lowCoverage chr5 179265250 179266250 22723 C5orf45 ENSG00000161010 0.920202 248 8 0.894417 226 8 0.90848 273 8 0.953021 273 8 0.967976 221 8 0.96247 376 8 0.896442 188 8 0.860163 220 8 0.961195 198 8 0.949136 263 8 0.925528 318 8 0.940559 96 8 0.977818 230 8 0.937519 161 8 0.972584 295 8 0.971591 131 8 NA 0 0 0.962439 307 8 0.839493 702 8 0.95113 278 8 0.900694 72 8 0.942351 115 8 0.953773 162 8 0.946008 126 8 0.934122 72 8 0.845402 376 8 0.956789 412 8 0.921340 99 8 0.872257 417 8 0.932933 278 8 0.945460 329 8 0.927747 376 8 0.9520258 184 8 0.8435465 156 8 0.9924242 555 8 0.9583333 11 0 0.9577648 144 8 0.972909 412 8 0.96976 178 8 0.970259 238 8 0.974790 248 8 0.970812 226 8 0.971380 194 8 0.918502 0.888007 0.885004 0.952078 0.967556 0.962929 0.896617 0.966158 0.951865 0.947461 0.926354 0.940267 0.969967 0.936850 0.969509 0.970190 NA 0.963148 0.943927 0.950965 0.899354 0.943564 0.953369 0.947577 0.936460 0.949098 0.957291 0.910982 0.966222 0.920982 0.944623 0.926463 0.9516211 0.839644 0.9933756 0.95348837 0.951121 0.9735323 0.970451 0.971449 0.977014 0.971332 0.971625 8 0.945044 0.943503 0.00121736 8 0.91541 0.868230 0.04718115 6.3547e-01 9.0413e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.0950e-01 9.0990e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01108446 0.41341546 insignificant 1.00000 insignificant 0.945367 0.962380 -0.01612015 8 0.95217 0.966584 -0.01441447 9.9617e-01 1.1845e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9760e-01 2.3347e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.01184314 6.2543e-01 insignificant 1.0000e+00 insignificant 0.945334 0.967712 -0.0225333 8 0.94619 0.970888 -0.02469771 9.9810e-01 7.0620e-03 weaklyHypometh 1.0000e+00 2.4352e-01 insignificant 9.9227e-01 1.1236e-03 weaklyHypometh 1.0000e+00 1.0215e-01 insignificant -0.0370765 6.3342e-04 weaklyHypometh 0.04704322 weaklyHypometh 0.944150 0.962380 -0.0169386 8 0.950059 0.966584 -0.0165248 9.9306e-01 1.0397e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9693e-01 3.1580e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0229276 3.6156e-01 insignificant 1.0000e+00 insignificant 0.944110 0.967712 -0.02353779 8 0.943817 0.970888 -0.0270718 9.9424e-01 6.5196e-03 weaklyHypometh 1.0000e+00 3.6468e-01 insignificant 9.9649e-01 1.7529e-02 weaklyHypometh 1.0000e+00 9.2257e-01 insignificant -0.0481609 4.7709e-04 weaklyHypometh 0.079515 weaklyHypometh 0.962355 0.967712 -0.0077876 8 0.962407 0.970888 -0.0084814 0.87748002 5.7759e-01 insignificant 1.000000 1.0000e+00 insignificant 0.4839482 4.6965e-01 insignificant 1 1.0000e+00 insignificant -0.0252333 2.9103e-01 insignificant 1.0000000 insignificant chr5 179690150 179691150 22731 MAPK9 ENSG00000050748 0.822535 444 7 0.844826 309 5 0.58279 254 5 0.804784 354 7 0.862564 88 5 0.91955 621 7 0.871250 319 5 0.709593 202 5 0.776739 151 5 0.871905 137 5 0.865708 312 5 0.686713 78 5 0.793228 161 5 0.804598 87 3 0.832122 219 5 0.795556 89 5 0.674603 44 2 0.482168 771 5 0.922107 464 5 0.81499 425 5 0.970000 92 5 0.620000 36 3 0.915179 111 5 0.854170 118 5 0.619792 53 3 0.812059 416 6 0.805776 152 5 0.913616 74 5 0.832702 409 5 0.869473 538 7 0.887988 545 7 0.963789 435 7 0.0102381 217 5 0.0000000 355 5 0.0000000 247 7 0.0779672 110 4 0.0000000 256 5 0.051045 439 7 0.84370 459 7 0.572400 363 7 0.682774 435 7 0.536031 790 5 0.736296 336 6 0.842765 0.879296 0.594571 0.810473 0.899346 0.879986 0.902258 0.763198 0.806127 0.918981 0.880207 0.752439 0.852559 0.760234 0.863710 0.896475 0.796049 0.540786 0.918482 0.817813 0.984538 0.697590 0.914659 0.892439 0.733404 0.860414 0.834814 0.917967 0.862463 0.847077 0.912032 0.953169 0.0072815 0.000000 0.0000000 0.01231725 0.000000 0.0075322 0.853334 0.719573 0.747770 0.569471 0.760251 4 0.818132 0.901309 -0.08471605 5 0.83000 0.866940 -0.03694319 9.9532e-01 3.9058e-06 weaklyHypometh 1.0000e+00 1.9529e-03 weaklyHypometh 9.9772e-01 7.7650e-03 weaklyHypometh 1.0000e+00 6.8349e-01 insignificant -0.05179562 0.22413110 insignificant 1.00000 insignificant 0.818132 0.014778 0.80724528 5 0.83000 0.036215 0.79378225 3.5012e-56 1.0000e+00 hypermethylated 5.8354e-54 1.0000e+00 hypermethylated 4.8142e-15 1.0000e+00 hypermethylated 6.2575e-13 1.0000e+00 hypermethylated 0.76370801 1.9826e-19 hypermethylated 1.9826e-16 hypermethylated 0.818132 0.748531 0.0883837 5 0.83000 0.643522 0.18647500 4.8912e-04 9.9999e-01 weaklyHypermeth 2.7740e-02 1.0000e+00 weaklyHypermeth 6.5111e-03 9.9998e-01 weaklyHypermeth 4.3407e-01 1.0000e+00 insignificant 0.1126755 1.1686e-01 insignificant 1.00000000 insignificant 0.901309 0.014778 0.8923086 5 0.866940 0.036215 0.8307254 2.3293e-68 1.0000e+00 hypermethylated 5.8233e-66 1.0000e+00 hypermethylated 5.0739e-13 1.0000e+00 hypermethylated 7.2484e-11 1.0000e+00 hypermethylated 0.8155036 1.5865e-12 hypermethylated 7.9323e-10 hypermethylated 0.901309 0.748531 0.17460380 5 0.866940 0.643522 0.2234182 3.1728e-10 1.0000e+00 weaklyHypermeth 6.3456e-08 1.0000e+00 weaklyHypermeth 2.7329e-06 1.0000e+00 weaklyHypermeth 6.8323e-04 1.0000e+00 weaklyHypermeth 0.1644712 3.8826e-02 weaklyHypermeth 0.970640 insignificant 0.014778 0.748531 -0.7192041 7 0.036215 0.643522 -0.6073073 1.00000000 1.1497e-24 hypomethylated 1.000000 1.9161e-22 hypomethylated 1.0000000 1.0783e-08 hypomethylated 1 1.3479e-06 hypomethylated -0.6510325 1.8096e-04 hypomethylated 0.0164513 hypomethylated chr5 179843450 179844450 22735 ENSG00000200555 0.854291 359 8 0.808801 364 8 0.78295 191 8 0.871953 246 8 0.793556 101 7 0.82124 424 8 0.758261 163 8 0.815009 253 6 0.804459 132 6 0.894040 179 7 0.769920 280 8 0.811290 98 8 0.859724 228 6 0.717356 87 4 0.900828 200 8 0.848214 61 6 0.828178 340 7 0.754629 245 8 0.806002 213 8 0.71886 266 8 0.760802 70 6 0.777035 111 6 0.808356 191 8 0.758730 95 7 0.719339 86 6 0.863429 381 8 0.807163 116 6 0.836490 47 4 0.807454 214 7 0.901772 352 8 0.874767 320 8 0.869571 398 8 0.5743355 235 6 0.4248417 131 8 0.6348052 201 8 0.6270221 61 6 0.6652566 117 7 0.808595 375 8 0.87593 308 8 0.871008 297 8 0.850049 283 8 0.847027 287 8 0.805812 286 8 0.861330 0.850100 0.789420 0.894452 0.809570 0.822108 0.871853 0.891635 0.790291 0.929290 0.889102 0.850238 0.841226 0.879563 0.863732 0.850910 0.805590 0.888846 0.903575 0.775650 0.861356 0.814219 0.834638 0.784835 0.763624 0.919093 0.819427 0.815660 0.880817 0.905413 0.901461 0.873042 0.6898033 0.612599 0.6679996 0.67126730 0.618254 0.8232261 0.877623 0.905093 0.873339 0.882066 0.872892 6 0.850113 0.864763 -0.01631330 8 0.79921 0.843234 -0.04402318 8.8517e-01 2.5379e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.2554e-01 6.3375e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00443122 0.82437493 insignificant 1.00000 insignificant 0.850113 0.663393 0.18939673 8 0.79921 0.639223 0.15998790 3.8381e-12 9.9988e-01 weaklyHypermeth 1.0373e-10 1.0000e+00 weaklyHypermeth 1.3389e-08 9.9999e-01 weaklyHypermeth 7.4381e-07 1.0000e+00 weaklyHypermeth 0.18850188 1.3028e-02 weaklyHypermeth 2.1714e-01 insignificant 0.851416 0.861739 -0.0196137 8 0.84078 0.853453 -0.01267495 7.5458e-01 2.7355e-02 weaklyHypometh 1.0000e+00 5.5826e-01 insignificant 5.5196e-01 7.4450e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0389868 4.0126e-02 weaklyHypometh 0.74307020 insignificant 0.864763 0.663393 0.2028392 8 0.843234 0.639223 0.2040111 1.5051e-10 1.0000e+00 hypermethylated 5.1901e-09 1.0000e+00 hypermethylated 3.6679e-06 1.0000e+00 hypermethylated 1.4672e-04 1.0000e+00 hypermethylated 0.1929331 1.1215e-02 weaklyHypermeth 2.1161e-01 insignificant 0.864945 0.861739 -0.00612405 8 0.843375 0.853453 -0.0100787 7.4277e-01 9.4938e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 8.5638e-01 3.3454e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0345555 1.0951e-01 insignificant 1.000000 insignificant 0.663685 0.861739 -0.2089702 8 0.656625 0.853453 -0.1968280 0.99999956 2.3378e-08 hypomethylated 1.000000 9.3512e-07 hypomethylated 1.0000000 6.2244e-08 hypomethylated 1 5.6586e-06 hypomethylated -0.2274886 5.7933e-03 weaklyHypometh 0.1887867 insignificant chr5 180143350 180144350 22741 OR2Y1 ENSG00000174339 0.750000 37 2 0.497855 79 5 0.74286 21 3 0.644444 53 5 0.726533 84 5 0.50210 47 3 0.823810 60 5 0.587395 65 5 0.659612 32 2 0.871429 28 3 0.589817 113 5 0.717273 36 4 0.807143 78 5 0.681649 68 5 0.726667 49 5 0.640741 34 2 NA 0 0 0.676378 66 6 0.711111 40 5 0.55726 29 2 0.703297 34 3 0.900000 7 0 0.675797 64 5 0.533333 31 4 0.541758 55 4 0.486255 81 5 0.433776 103 5 0.750000 4 0 0.628571 53 5 0.576132 74 5 0.541176 59 5 0.485714 31 3 0.7277778 83 5 0.5545455 51 5 0.2725615 100 5 0.3333333 6 0 0.5596025 92 5 0.493987 69 5 0.50198 43 5 0.712381 50 5 0.638735 82 5 0.666667 17 2 0.651717 49 5 0.645349 0.489048 0.671096 0.684755 0.664651 0.596253 0.784053 0.633242 0.783315 0.835548 0.634257 0.689112 0.737542 0.793995 0.706202 0.554264 NA 0.667905 0.677003 0.683924 0.646584 0.872093 0.639417 0.612203 0.482750 0.634659 0.499683 0.741030 0.500000 0.569651 0.512800 0.470100 0.6346253 0.601480 0.4103654 0.50546700 0.470204 0.5144816 0.705103 0.706534 0.609201 0.596899 0.605262 0 0.705594 0.625839 0.07591868 5 0.64022 0.511636 0.12858411 2.1186e-03 9.9397e-01 weaklyHypermeth 6.3042e-01 1.0000e+00 insignificant 3.6965e-02 9.9844e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.07503718 0.11206031 lowCoverage 1.00000 lowCoverage 0.706404 0.487500 0.21465633 5 0.65775 0.517177 0.14057085 2.6054e-07 9.7853e-01 hypermethylated 4.6524e-06 1.0000e+00 hypermethylated 1.0323e-04 9.8694e-01 hypermethylated 2.5074e-03 1.0000e+00 hypermethylated 0.18938680 3.6884e-02 lowCoverage 4.7287e-01 lowCoverage 0.708709 0.688797 0.0238362 5 0.67008 0.479927 0.19015170 2.4692e-01 9.5904e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.2690e-01 9.5495e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0453912 3.1611e-01 lowCoverage 1.00000000 lowCoverage 0.626263 0.487500 0.1198733 5 0.513091 0.517177 -0.0040863 6.9808e-04 5.7540e-01 weaklyHypermeth 7.6712e-03 1.0000e+00 weaklyHypermeth 4.1720e-02 7.8304e-01 weaklyHypermeth 3.5966e-01 1.0000e+00 insignificant 0.1143496 1.7838e-01 lowCoverage 1.0000e+00 lowCoverage 0.627319 0.688797 -0.04368668 5 0.586389 0.479927 0.1064619 7.6078e-01 1.3825e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7026e-01 3.0139e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0296459 5.8010e-01 lowCoverage 1.000000 lowCoverage 0.487374 0.691667 -0.2104993 5 0.578458 0.559915 0.0185428 0.99680871 2.3007e-05 hypomethylated 1.000000 5.2392e-04 hypomethylated 0.9466069 1.1021e-03 weaklyHypometh 1 2.6879e-02 weaklyHypometh -0.1439956 9.8923e-02 lowCoverage 0.8912021 lowCoverage chr5 180491150 180492150 22749 ENSG00000185372 0.889003 269 5 0.786595 195 5 0.77395 167 5 0.884298 285 5 0.861190 108 5 0.88918 302 5 0.879049 157 5 0.801218 136 5 0.776437 172 5 0.876099 200 5 0.874569 182 5 0.835806 84 5 0.866110 212 5 0.838971 71 4 0.863739 195 5 0.751984 27 3 0.845141 63 3 0.899724 348 5 0.842698 97 5 0.88574 202 5 0.757937 37 5 0.817652 149 5 0.889003 192 5 0.900741 110 5 0.920058 87 5 0.935436 234 5 0.812000 77 5 0.803846 78 5 0.887455 192 5 0.920214 252 5 0.936411 230 5 0.902356 266 5 0.7702573 201 5 0.6428959 129 5 0.7321429 140 3 0.7030808 44 5 0.7532530 102 5 0.811679 258 5 0.84598 264 5 0.853514 270 5 0.820714 305 5 0.885073 233 3 0.867183 252 5 0.900052 0.791391 0.736336 0.869603 0.879457 0.891735 0.909058 0.824622 0.788136 0.878077 0.889176 0.837241 0.858755 0.840643 0.863485 0.742828 0.837748 0.885977 0.884085 0.898162 0.800542 0.785809 0.898139 0.913418 0.921071 0.908356 0.835326 0.797194 0.901265 0.919050 0.931552 0.910744 0.7696690 0.533235 0.6085836 0.71540224 0.787780 0.8159664 0.818430 0.836196 0.823701 0.847428 0.849030 5 0.862039 0.893382 -0.03107715 5 0.88562 0.878123 0.00749439 7.4944e-01 5.6796e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 8.8720e-01 3.9236e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.02751712 0.18398185 lowCoverage 1.00000 lowCoverage 0.861960 0.699085 0.16211396 5 0.86274 0.726288 0.13645277 5.8856e-06 9.7675e-01 weaklyHypermeth 8.2895e-05 1.0000e+00 weaklyHypermeth 2.0587e-02 5.5210e-01 weaklyHypermeth 2.0795e-01 1.0000e+00 insignificant 0.11052375 3.7989e-03 lowCoverage 9.9972e-02 lowCoverage 0.861960 0.816465 0.0377313 5 0.86274 0.852986 0.00975477 1.5389e-01 4.1252e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.3181e-01 2.7637e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0084168 5.7696e-01 lowCoverage 1.00000000 lowCoverage 0.893572 0.699085 0.1971921 5 0.887081 0.726288 0.1607928 5.6320e-05 9.9712e-01 weaklyHypermeth 8.5333e-04 1.0000e+00 weaklyHypermeth 9.1398e-03 8.6570e-01 weaklyHypermeth 1.1284e-01 1.0000e+00 insignificant 0.1380409 7.6906e-04 lowCoverage 3.2044e-02 lowCoverage 0.893572 0.816465 0.06742457 5 0.887081 0.852986 0.0340948 1.8616e-03 8.1324e-01 weaklyHypermeth 9.3081e-02 1.0000e+00 weaklyHypermeth 6.3867e-02 6.3624e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0191003 3.6217e-01 lowCoverage 1.000000 lowCoverage 0.699085 0.816465 -0.1232953 5 0.726288 0.852986 -0.1266980 0.98236989 1.5423e-02 weaklyHypometh 1.000000 1.5120e-01 insignificant 0.9922923 7.0685e-02 insignificant 1 6.5449e-01 insignificant -0.1189405 2.7172e-03 lowCoverage 0.1261452 lowCoverage chr5 180801150 180802150 22756 ENSG00000183127 0.676154 249 6 0.788264 292 6 0.51360 134 6 0.870609 142 4 0.402159 66 4 0.86822 248 6 0.260306 96 6 0.863756 155 6 0.849367 180 6 0.816005 122 5 0.808814 99 6 0.549832 43 4 0.562673 120 6 0.538961 65 4 0.681930 99 6 0.266667 34 4 0.426587 45 4 0.813985 118 4 0.885104 105 6 0.49235 231 6 0.310185 38 4 0.378593 83 6 0.452275 140 6 0.672283 67 6 0.549145 44 4 0.540858 208 6 0.232372 76 6 0.162037 58 5 0.289019 100 6 0.413083 303 6 0.191923 345 6 0.334118 302 6 0.3617936 233 6 0.5340909 65 6 0.7388889 100 4 0.6333333 16 2 0.6877778 160 6 0.389318 214 6 0.46669 189 6 0.820802 144 6 0.207700 135 6 0.898286 197 6 0.883689 123 4 0.701813 0.778294 0.586713 0.916477 0.539199 0.869629 0.324535 0.869165 0.873583 0.788380 0.807479 0.553714 0.659868 0.535323 0.662043 0.351232 0.564215 0.749635 0.902206 0.503160 0.414409 0.442862 0.520656 0.738339 0.398104 0.640195 0.310534 0.213909 0.319888 0.503779 0.255215 0.449310 0.4029049 0.559748 0.7268647 0.73891626 0.764039 0.4384095 0.536044 0.803076 0.249093 0.899730 0.886830 4 0.706773 0.417800 0.27908951 6 0.66921 0.357633 0.31157331 9.1182e-20 1.0000e+00 hypermethylated 9.1182e-17 1.0000e+00 hypermethylated 8.7734e-11 1.0000e+00 hypermethylated 8.7734e-08 1.0000e+00 hypermethylated 0.26960950 0.00025917 hypermethylated 0.25917 insignificant 0.706773 0.516497 0.19711774 6 0.66921 0.478076 0.19113018 1.4407e-06 1.0000e+00 weaklyHypermeth 2.3618e-05 1.0000e+00 weaklyHypermeth 1.2522e-02 9.3077e-01 weaklyHypermeth 1.4393e-01 1.0000e+00 insignificant 0.08923343 2.8338e-01 insignificant 1.0000e+00 insignificant 0.706773 0.701777 0.0108532 6 0.66921 0.661154 0.00805271 6.5533e-01 7.8354e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4028e-01 3.7439e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0086675 9.5452e-01 insignificant 1.00000000 insignificant 0.417800 0.516497 -0.0782980 6 0.357633 0.478076 -0.1204431 9.9640e-01 1.8413e-03 weaklyHypometh 1.0000e+00 1.6739e-01 insignificant 9.8673e-01 2.0411e-03 weaklyHypometh 1.0000e+00 2.5975e-01 insignificant -0.1803761 4.3574e-02 weaklyHypometh 5.0667e-01 insignificant 0.417800 0.701777 -0.27660318 6 0.357633 0.661154 -0.3035206 1.0000e+00 3.5777e-08 hypomethylated 1.0000e+00 5.9629e-06 hypomethylated 1.0000e+00 1.1970e-04 hypomethylated 1.0000e+00 2.3940e-02 hypomethylated -0.2782770 1.1251e-01 insignificant 1.000000 insignificant 0.516497 0.701777 -0.1914310 6 0.478076 0.661154 -0.1830775 0.99902705 8.8344e-03 weaklyHypometh 1.000000 9.6027e-02 weaklyHypometh 0.9300725 1.1067e-01 insignificant 1 9.0240e-01 insignificant -0.0979009 5.4203e-01 insignificant 1.0000000 insignificant chr6 154250 155250 22763 ENSG00000205653 0.950465 281 5 0.780897 89 5 0.89487 90 5 0.967053 290 5 0.924624 61 5 0.90540 292 5 0.934866 121 5 0.902593 124 5 0.844169 132 5 0.930645 107 5 0.838102 147 5 0.854545 83 5 0.896842 172 5 0.925305 108 5 0.881505 112 5 0.942857 98 5 0.933333 37 5 0.924561 325 5 0.919048 50 3 0.94182 238 5 0.920000 25 5 0.897037 108 5 0.847778 111 5 0.975000 65 5 0.966667 22 3 0.830882 131 5 0.718582 72 5 0.887983 65 5 0.952971 83 3 0.918630 134 5 0.952365 153 5 0.910722 188 5 0.5911615 150 5 0.7200000 32 3 0.4843750 64 2 1.0000000 15 3 0.7988293 177 5 0.324409 140 5 0.94998 280 5 0.908962 183 5 0.851244 238 5 0.932094 239 5 0.958327 261 5 0.933818 0.788799 0.870118 0.955876 0.932901 0.891314 0.931639 0.890852 0.839374 0.949113 0.819921 0.805821 0.895677 0.918376 0.891888 0.947368 0.910981 0.908502 0.891507 0.942779 0.892398 0.918259 0.871020 0.987573 0.955166 0.874785 0.772407 0.881158 0.936999 0.929539 0.936357 0.896556 0.5977458 0.626316 0.6268620 0.92463570 0.805180 0.3433779 0.954057 0.897167 0.885039 0.909077 0.944265 3 0.902942 0.898876 0.00556802 5 0.91020 0.889671 0.02052556 1.0633e-01 5.2328e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.8863e-01 2.9207e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00645703 0.78367598 lowCoverage 1.00000 lowCoverage 0.902942 0.593426 0.31219660 5 0.91020 0.583738 0.32645832 4.3210e-19 1.0000e+00 hypermethylated 2.2397e-17 1.0000e+00 hypermethylated 1.5937e-04 1.0000e+00 hypermethylated 3.6220e-03 1.0000e+00 hypermethylated 0.25154595 4.9603e-02 lowCoverage 5.3249e-01 lowCoverage 0.902942 0.920899 -0.0206210 5 0.91020 0.927498 -0.01730086 8.8218e-01 1.0076e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6023e-01 1.5538e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0154463 5.0177e-01 lowCoverage 1.00000000 lowCoverage 0.898876 0.593426 0.3010736 5 0.889671 0.583738 0.3059328 5.5718e-11 1.0000e+00 hypermethylated 1.9899e-09 1.0000e+00 hypermethylated 7.1289e-04 9.9998e-01 hypermethylated 1.3451e-02 1.0000e+00 hypermethylated 0.2450889 5.3569e-02 lowCoverage 5.8867e-01 lowCoverage 0.898876 0.920899 -0.02314807 5 0.889671 0.927498 -0.0378264 9.3212e-01 1.7776e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.5739e-01 3.6095e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0219033 4.5301e-01 lowCoverage 1.000000 lowCoverage 0.593426 0.920899 -0.3250441 5 0.583738 0.927498 -0.3437592 0.99999675 1.2884e-06 hypomethylated 1.000000 4.1563e-05 hypomethylated 0.9999797 3.3168e-03 weaklyHypometh 1 6.1423e-02 weaklyHypometh -0.2669923 4.0602e-02 lowCoverage 0.5561959 lowCoverage chr6 256250 257250 22764 DUSP22 ENSG00000112679 0.739230 411 11 0.655179 144 11 0.48169 98 10 0.849745 203 11 0.797430 90 7 0.76210 473 11 0.677112 139 11 0.721976 192 9 0.641794 90 6 0.799176 117 11 0.778064 308 11 0.766834 56 6 0.768425 146 11 0.749206 39 6 0.786438 153 7 0.669559 70 7 0.656153 71 6 0.724031 257 11 0.789460 208 11 0.78544 375 11 0.833392 81 9 0.796359 118 11 0.665323 174 11 0.676918 118 8 0.801515 74 8 0.794765 242 11 0.758932 137 7 0.669974 69 4 0.705182 124 8 0.757933 207 11 0.720251 209 11 0.660126 475 11 0.6212141 167 10 0.6631043 148 11 0.7566820 218 11 0.7363215 71 6 0.7218615 98 4 0.733024 242 11 0.87484 298 11 0.825007 323 11 0.779889 281 11 0.804802 253 11 0.742117 328 11 0.800035 0.768100 0.525382 0.809867 0.828574 0.829692 0.727498 0.739314 0.685418 0.768004 0.832890 0.820013 0.854464 0.747425 0.786630 0.670676 0.714126 0.807672 0.816787 0.807375 0.817222 0.806946 0.801101 0.866675 0.809317 0.815285 0.730302 0.673676 0.768632 0.736811 0.757574 0.776572 0.5974066 0.634233 0.7758160 0.64840414 0.700406 0.7411949 0.841173 0.856536 0.785817 0.782840 0.803246 4 0.789560 0.780079 0.00697093 11 0.74675 0.715048 0.03170600 2.1499e-01 8.5903e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.8894e-01 3.2273e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00677066 0.79254281 insignificant 1.00000 insignificant 0.789560 0.707627 0.07928137 11 0.74675 0.695491 0.05126225 9.3655e-05 9.9910e-01 weaklyHypermeth 1.0643e-03 1.0000e+00 weaklyHypermeth 2.1398e-02 9.9496e-01 weaklyHypermeth 2.1186e-01 1.0000e+00 insignificant 0.02458392 3.9569e-01 insignificant 1.0000e+00 insignificant 0.789560 0.826703 -0.0296324 11 0.74675 0.779043 -0.03228921 9.9853e-01 1.9399e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9987e-01 1.7042e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0753799 2.5072e-02 weaklyHypometh 0.54505326 insignificant 0.780079 0.707627 0.0703215 11 0.715048 0.695491 0.0195563 1.2385e-03 9.6113e-01 weaklyHypermeth 1.2637e-02 1.0000e+00 weaklyHypermeth 3.6469e-03 9.4571e-01 weaklyHypermeth 5.5256e-02 1.0000e+00 weaklyHypermeth 0.0313546 2.7958e-01 insignificant 1.0000e+00 insignificant 0.780079 0.826703 -0.03582571 11 0.715048 0.779043 -0.0639952 9.9631e-01 7.0782e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9506e-01 2.1097e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0686092 3.8092e-02 weaklyHypometh 0.970640 insignificant 0.707627 0.826703 -0.1088811 11 0.695491 0.779043 -0.0835515 1.00000000 1.8266e-04 weaklyHypometh 1.000000 3.2619e-03 weaklyHypometh 1.0000000 3.5715e-03 weaklyHypometh 1 6.4937e-02 weaklyHypometh -0.0999638 1.0243e-02 weaklyHypometh 0.2438839 insignificant chr6 680950 681950 22769 EXOC2 ENSG00000112685 0.716698 755 30 0.632000 652 28 0.77788 481 24 0.868867 656 27 0.722836 294 26 0.78303 997 29 0.697744 360 24 0.804068 562 28 0.789684 319 20 0.765704 348 24 0.772494 955 30 0.683258 250 22 0.790824 478 27 0.743848 172 12 0.771419 450 22 0.607633 286 20 0.714034 4288 20 0.814475 565 25 0.692228 685 24 0.85876 913 27 0.776515 260 20 0.830051 225 19 0.769838 425 27 0.825400 240 19 0.864495 191 17 0.746806 855 30 0.781201 326 16 0.804339 190 14 0.830769 454 23 0.808714 804 27 0.701362 819 28 0.770135 1111 30 0.7114567 498 24 0.7149661 346 25 0.7248429 692 28 0.6920538 176 20 0.6956317 428 24 0.722312 713 30 0.73969 895 30 0.789554 926 30 0.832633 731 30 0.757925 538 24 0.833249 984 29 0.798174 0.660858 0.788092 0.870625 0.798385 0.802882 0.765614 0.769307 0.754585 0.811694 0.826646 0.639095 0.851674 0.803730 0.832688 0.681171 0.758892 0.795049 0.814205 0.840915 0.791029 0.809430 0.782346 0.867693 0.863374 0.798799 0.797873 0.815826 0.846110 0.807335 0.792074 0.809708 0.7159970 0.696499 0.8058593 0.67004878 0.759656 0.7541658 0.821000 0.836252 0.831344 0.812267 0.836024 10 0.833149 0.833107 -0.00505367 28 0.72572 0.695865 0.02985408 8.8863e-01 1.1606e-02 weaklyHypometh 1.0000e+00 5.5267e-01 insignificant 9.9928e-01 1.8644e-02 weaklyHypometh 1.0000e+00 9.8127e-01 insignificant -0.04209448 0.04173056 weaklyHypometh 1.00000 insignificant 0.833899 0.762539 0.06122094 27 0.75464 0.677289 0.07735570 4.3474e-07 9.9999e-01 weaklyHypermeth 7.6270e-06 1.0000e+00 weaklyHypermeth 1.8959e-04 9.9993e-01 weaklyHypermeth 4.0339e-03 1.0000e+00 weaklyHypermeth 0.04016376 2.0552e-02 weaklyHypermeth 3.0675e-01 insignificant 0.833680 0.845039 -0.0298258 30 0.74999 0.743646 0.00634739 8.9464e-01 2.3345e-02 weaklyHypometh 1.0000e+00 5.1878e-01 insignificant 9.3648e-01 8.2455e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0402356 1.2966e-01 insignificant 1.00000000 insignificant 0.834126 0.762890 0.0614078 25 0.721157 0.700545 0.0206126 3.3601e-07 1.0000e+00 weaklyHypermeth 7.0003e-06 1.0000e+00 weaklyHypermeth 3.0494e-07 1.0000e+00 weaklyHypermeth 1.6941e-05 1.0000e+00 weaklyHypermeth 0.0822582 3.2349e-05 weaklyHypermeth 2.8150e-03 weaklyHypermeth 0.834240 0.844870 -0.01567462 28 0.744141 0.737703 0.0064376 7.7283e-01 6.5518e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.3702e-01 8.3981e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0018589 9.3732e-01 insignificant 1.000000 insignificant 0.765890 0.845794 -0.0787928 27 0.760093 0.776914 -0.0168216 0.99999964 2.2160e-06 weaklyHypometh 1.000000 6.3315e-05 weaklyHypometh 0.9999995 1.2428e-05 weaklyHypometh 1 8.2853e-04 weaklyHypometh -0.0803993 1.1190e-02 weaklyHypometh 0.2543196 insignificant chr6 984350 985350 22777 EXOC2 ENSG00000112685 0.918042 144 6 0.840112 240 6 0.86872 244 6 0.922021 265 6 0.934085 118 6 0.92545 253 6 0.874687 92 6 0.909688 241 6 0.864175 238 6 0.935226 162 6 0.944996 258 6 0.916819 121 6 0.883503 205 6 0.902598 190 6 0.906186 360 6 0.868280 127 6 1.000000 1 0 0.907685 274 6 0.756143 174 6 0.91036 240 6 0.888889 24 2 0.856318 106 6 0.961219 125 6 0.980952 52 3 0.907019 63 6 0.910208 334 6 0.690318 117 6 0.888791 107 6 0.888160 269 6 0.926041 200 6 0.000000 3 0 NA 0 0 0.6921356 163 6 0.7973485 80 6 0.8684614 243 7 0.6111111 12 0 0.7956072 121 6 1.000000 1 0 0.66752 143 6 0.868897 247 6 0.731316 215 6 0.908597 216 6 0.823664 253 6 0.911635 0.838244 0.884586 0.917945 0.907846 0.927018 0.923722 0.921389 0.833547 0.917544 0.939906 0.924667 0.815562 0.895945 0.905927 0.822892 NA 0.910267 0.851880 0.883398 0.942029 0.806632 0.936210 0.974879 0.897368 0.876852 0.840906 0.963850 0.910434 0.907133 0.539144 NA 0.6353567 0.870718 0.7499380 0.58212560 0.805767 NA 0.885621 0.824093 0.846068 0.842124 0.803738 0 0.897644 0.902788 -0.00556810 6 0.89177 0.855598 0.03617605 4.8952e-01 1.2520e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.9667e-01 1.3837e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.09053742 0.30942279 lowCoverage 1.00000 lowCoverage 0.897592 0.746774 0.14907742 6 0.87631 0.792595 0.08371819 7.3536e-09 9.4127e-01 weaklyHypermeth 1.5986e-07 1.0000e+00 weaklyHypermeth 2.2393e-02 8.7601e-01 weaklyHypermeth 2.1954e-01 1.0000e+00 insignificant 0.10532819 1.1647e-01 lowCoverage 1.0000e+00 lowCoverage 0.897644 0.859404 0.0394494 6 0.89177 0.767281 0.12449318 2.5789e-04 9.0078e-01 weaklyHypermeth 1.7193e-02 1.0000e+00 weaklyHypermeth 1.5502e-02 9.7989e-01 weaklyHypermeth 7.1364e-01 1.0000e+00 insignificant 0.0994390 8.7607e-02 insignificant 1.00000000 insignificant 0.905172 0.746774 0.1533397 6 0.916602 0.792595 0.1240068 4.4115e-05 9.9863e-01 weaklyHypermeth 6.7870e-04 1.0000e+00 weaklyHypermeth 1.0575e-02 9.8412e-01 weaklyHypermeth 1.2741e-01 1.0000e+00 insignificant 0.0147908 8.8505e-01 lowCoverage 1.0000e+00 lowCoverage 0.902788 0.859404 0.03834798 6 0.855598 0.767281 0.0883171 1.6331e-02 9.5198e-01 weaklyHypermeth 4.5363e-01 1.0000e+00 insignificant 2.3804e-02 9.9182e-01 weaklyHypermeth 9.2863e-01 1.0000e+00 insignificant 0.0089016 9.2670e-01 lowCoverage 1.000000 lowCoverage 0.746774 0.859944 -0.0974517 6 0.792595 0.781655 0.0109407 0.64134852 3.3165e-02 weaklyHypometh 1.000000 2.7184e-01 insignificant 0.6411466 3.4561e-01 insignificant 1 1.0000e+00 insignificant -0.0058892 9.3565e-01 lowCoverage 1.0000000 lowCoverage chr6 2743450 2744450 22847 WRNIP1 ENSG00000124535 0.762255 372 6 0.848491 300 6 0.80399 171 6 0.873647 400 6 0.831518 117 6 0.91269 475 6 0.902713 168 6 0.813398 306 6 0.866262 257 6 0.922026 282 6 0.779943 203 6 0.784722 121 6 0.761415 331 6 0.857238 246 6 0.839769 426 6 0.935417 96 6 0.607143 30 2 0.814098 474 6 0.841402 262 6 0.86506 274 6 0.842593 83 5 0.720138 155 6 0.914028 216 6 0.949583 127 6 0.747222 90 6 0.734231 359 6 0.859541 99 6 0.884181 143 6 0.865761 284 6 0.873494 388 6 0.757232 359 6 0.928689 353 6 0.6889275 331 6 0.6229885 127 6 0.4000000 5 0 0.7222222 18 0 0.8253436 187 6 0.834916 362 6 0.62925 377 6 0.674665 333 6 0.800291 367 6 0.648807 251 6 0.771481 396 6 0.802166 0.862271 0.830365 0.899625 0.842419 0.931042 0.900454 0.836482 0.882352 0.934566 0.829299 0.824011 0.797090 0.882666 0.857491 0.962745 0.626401 0.848637 0.851847 0.882917 0.891204 0.767943 0.912533 0.959761 0.806975 0.776896 0.887809 0.903042 0.878625 0.889821 0.796830 0.939170 0.7545661 0.687035 0.4406273 0.84558824 0.864461 0.8916422 0.671077 0.722150 0.836268 0.678075 0.806537 6 0.856524 0.860588 -0.00113597 6 0.83950 0.839312 0.00018411 7.1477e-01 3.1201e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.7448e-01 3.1568e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00856447 0.76533559 insignificant 1.00000 insignificant 0.856524 0.816505 0.04625096 6 0.83950 0.765837 0.07365879 6.7310e-04 1.5909e-01 weaklyHypermeth 6.6179e-03 1.0000e+00 weaklyHypermeth 4.2281e-03 1.0999e-02 weaklyHypermeth 5.7136e-02 7.8564e-01 weaklyHypermeth 0.14876036 7.2565e-02 lowCoverage 7.3298e-01 lowCoverage 0.856524 0.727958 0.1179847 6 0.83950 0.712980 0.12651568 4.6811e-11 9.9996e-01 weaklyHypermeth 1.1703e-08 1.0000e+00 weaklyHypermeth 8.7021e-08 9.9993e-01 weaklyHypermeth 2.1755e-05 1.0000e+00 weaklyHypermeth 0.1262617 1.5776e-02 weaklyHypermeth 0.38478332 insignificant 0.860588 0.816505 0.0473964 6 0.839312 0.765837 0.0734747 2.1872e-02 2.7795e-01 weaklyHypermeth 1.6696e-01 1.0000e+00 insignificant 1.8306e-02 1.1271e-01 weaklyHypermeth 1.9684e-01 1.0000e+00 insignificant 0.1573248 6.2091e-02 lowCoverage 6.5359e-01 lowCoverage 0.860588 0.727958 0.11800855 6 0.839312 0.712980 0.1263316 9.2687e-08 9.9926e-01 weaklyHypermeth 1.5448e-05 1.0000e+00 weaklyHypermeth 9.8949e-06 9.9912e-01 weaklyHypermeth 1.6492e-03 1.0000e+00 weaklyHypermeth 0.1348261 1.1549e-02 weaklyHypermeth 0.607864 insignificant 0.816505 0.727958 0.0685723 6 0.765837 0.712980 0.0528569 0.00031743 8.7553e-01 weaklyHypermeth 0.046334 1.0000e+00 weaklyHypermeth 0.0070131 5.4636e-01 weaklyHypermeth 1 1.0000e+00 insignificant -0.0224987 7.6899e-01 lowCoverage 1.0000000 lowCoverage chr6 2968850 2969850 22866 ENSG00000215074 0.604471 1207 23 0.458485 900 24 0.42990 935 24 0.606696 958 21 0.537177 527 22 0.59924 1231 23 0.410536 871 24 0.595377 743 24 0.587180 856 24 0.598126 843 22 0.617661 830 24 0.585857 493 19 0.381896 993 22 0.624380 343 16 0.519746 824 21 0.547687 400 17 0.211469 551 18 0.512060 1265 21 0.150030 625 21 0.60321 887 22 0.520333 284 18 0.386475 540 16 0.445739 782 24 0.478445 462 23 0.501770 472 18 0.517803 1148 24 0.496190 574 20 0.443171 377 18 0.589434 717 19 0.606784 1089 24 0.629712 1033 24 0.496681 1288 23 0.1890702 1027 24 0.1366263 584 21 0.2648723 654 14 0.1826894 262 15 0.1957438 644 24 0.261952 1072 24 0.59301 1207 21 0.579902 1108 22 0.428004 1041 21 0.547959 888 19 0.545313 1175 22 0.555090 0.401201 0.378044 0.598367 0.474360 0.537595 0.291250 0.541899 0.498742 0.487625 0.586318 0.482702 0.307750 0.540408 0.409952 0.449032 0.168171 0.458267 0.105723 0.579084 0.560508 0.317924 0.360637 0.438433 0.466864 0.444388 0.501840 0.354115 0.517472 0.545376 0.595341 0.400805 0.0774197 0.060351 0.1020172 0.10924861 0.081201 0.1523814 0.571197 0.529814 0.395798 0.491968 0.510508 14 0.473400 0.479849 -0.01363525 24 0.51449 0.499051 0.01543998 7.5418e-01 3.3376e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.1991e-01 7.5074e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00031876 0.99306355 insignificant 1.00000 insignificant 0.473493 0.150872 0.33829837 24 0.53355 0.212396 0.32115083 4.9547e-61 1.0000e+00 hypermethylated 9.9094e-59 1.0000e+00 hypermethylated 3.3118e-32 1.0000e+00 hypermethylated 1.1039e-29 1.0000e+00 hypermethylated 0.30390043 2.2463e-08 hypermethylated 3.2090e-06 hypermethylated 0.473464 0.534970 -0.0535019 21 0.51399 0.547044 -0.03305193 9.3482e-01 1.7068e-02 weaklyHypometh 1.0000e+00 4.3776e-01 insignificant 9.1465e-01 1.9260e-02 weaklyHypometh 1.0000e+00 5.6647e-01 insignificant -0.0297789 4.8889e-01 insignificant 1.00000000 insignificant 0.479849 0.150636 0.3503749 24 0.499016 0.175359 0.3236575 1.5426e-64 1.0000e+00 hypermethylated 3.0852e-62 1.0000e+00 hypermethylated 3.6189e-29 1.0000e+00 hypermethylated 1.2063e-26 1.0000e+00 hypermethylated 0.3042192 5.2802e-08 hypermethylated 8.8003e-06 hypermethylated 0.479959 0.534712 -0.03659499 21 0.517535 0.513491 0.0040435 9.6813e-01 2.3508e-03 weaklyHypometh 1.0000e+00 2.0008e-01 insignificant 9.0840e-01 6.9690e-03 weaklyHypometh 1.0000e+00 6.6651e-01 insignificant -0.0294602 4.3212e-01 insignificant 1.000000 insignificant 0.151050 0.535081 -0.3788498 21 0.220565 0.571703 -0.3511376 1.00000000 4.1427e-55 hypomethylated 1.000000 1.3809e-52 hypomethylated 1.0000000 1.9305e-18 hypomethylated 1 6.4350e-16 hypomethylated -0.3336794 2.2394e-05 hypomethylated 0.0047258 hypomethylated chr6 2998650 2999650 22869 ENSG00000217707 0.159929 457 19 0.048592 684 16 0.12235 819 16 0.029986 273 14 0.137344 613 16 0.12889 537 22 0.068768 1179 16 0.067113 660 16 0.046894 1005 16 0.055430 835 16 0.089140 664 16 0.043076 1068 16 0.081658 800 16 0.083333 55 3 0.065393 814 16 0.035023 908 16 0.081077 989 16 0.106070 271 13 0.018002 480 21 0.10311 464 19 0.074114 142 12 0.073390 144 5 0.090083 480 16 0.074186 203 15 0.152778 90 5 0.133405 820 22 0.085103 273 16 0.053479 235 13 0.090935 493 13 0.081995 853 21 0.059882 775 20 0.077442 615 22 0.0548555 622 16 0.0539046 484 13 0.1571225 645 16 0.0565476 188 12 0.1172372 223 15 0.158367 755 22 0.11014 427 22 0.064472 375 22 0.105797 239 9 0.069933 293 15 0.167728 282 11 0.056795 0.032399 0.094885 0.015761 0.043913 0.050449 0.035288 0.031702 0.021571 0.026156 0.050275 0.030072 0.050958 0.033422 0.038917 0.022811 0.024764 0.057412 0.019572 0.034049 0.044851 0.039837 0.052093 0.042500 0.053276 0.052228 0.047822 0.088265 0.049519 0.037402 0.047070 0.043574 0.0291320 0.033461 0.0611471 0.01126331 0.081653 0.0698362 0.065729 0.034632 0.027655 0.038506 0.071510 3 0.073198 0.098495 -0.02743456 16 0.10630 0.077868 0.02843411 9.9051e-01 5.5294e-03 weaklyHypometh 1.0000e+00 3.4558e-01 insignificant 8.2827e-01 1.7212e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00867332 0.47266571 insignificant 1.00000 insignificant 0.073198 0.147805 -0.06716137 18 0.10630 0.105525 0.00077639 6.7034e-01 8.7175e-03 weaklyHypometh 1.0000e+00 5.1279e-01 insignificant 2.9719e-01 8.0705e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02111311 3.8086e-01 insignificant 1.0000e+00 insignificant 0.073460 0.061881 -0.0213652 15 0.18400 0.149897 0.03409977 9.6774e-01 3.1342e-02 weaklyHypometh 1.0000e+00 6.1456e-01 insignificant 7.2793e-01 6.4638e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0250538 2.6586e-01 insignificant 1.00000000 insignificant 0.098437 0.148097 -0.0333810 16 0.074753 0.141304 -0.0665514 7.9258e-01 3.5615e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.4271e-01 8.5032e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0124398 5.9703e-01 insignificant 1.0000e+00 insignificant 0.098553 0.060211 -0.00899864 13 0.081253 0.089009 -0.0077562 7.7513e-01 5.6256e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.6553e-01 8.7974e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0163805 4.5078e-01 insignificant 1.000000 insignificant 0.147856 0.060211 0.0092185 16 0.110113 0.089009 0.0211041 0.83558377 7.1495e-01 insignificant 1.000000 1.0000e+00 insignificant 0.9584473 9.8627e-01 insignificant 1 1.0000e+00 insignificant -0.0039407 8.9056e-01 insignificant 1.0000000 insignificant chr6 3153850 3154850 22875 ENSG00000216819 0.137211 251 5 0.069599 211 5 0.09407 183 5 0.375544 198 3 0.061519 145 5 0.36834 230 5 0.069457 244 5 0.117604 180 5 0.062907 214 5 0.054960 173 5 0.106845 260 5 0.178831 196 5 0.204266 186 5 0.214286 14 2 0.085081 167 5 0.096625 186 5 0.090805 210 3 0.128639 226 5 0.097113 117 5 0.16813 180 5 0.082667 66 3 0.146667 21 3 0.184888 122 5 0.341956 88 5 0.250137 142 3 0.057303 262 5 0.108751 99 5 0.026667 61 5 0.164331 150 5 0.055519 256 5 0.132152 286 5 0.106984 255 5 0.0200164 210 5 0.0142857 164 5 0.0000000 577 5 0.0000000 118 3 0.0833333 140 5 0.042646 249 5 0.28949 250 5 0.266375 200 5 0.235058 229 4 0.310545 156 5 0.378267 119 3 0.124505 0.067000 0.103196 0.323046 0.065913 0.317183 0.078097 0.109540 0.061179 0.059432 0.106474 0.175785 0.204087 0.178794 0.080123 0.104875 0.101389 0.146940 0.090478 0.166779 0.099742 0.160724 0.198339 0.220594 0.266465 0.101202 0.104917 0.026873 0.164608 0.076509 0.127934 0.112797 0.0188234 0.014396 0.0000000 0.00000000 0.000000 0.0411226 0.237407 0.222344 0.195584 0.264893 0.307507 3 0.125696 0.116408 0.00945576 5 0.23062 0.083508 0.14710947 3.8162e-01 9.6872e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.5480e-01 8.9123e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00092292 0.97793763 lowCoverage 1.00000 lowCoverage 0.125497 0.011676 0.11178717 5 0.12287 0.014803 0.10806197 8.7070e-09 1.0000e+00 weaklyHypermeth 1.7769e-07 1.0000e+00 weaklyHypermeth 3.7283e-09 1.0000e+00 weaklyHypermeth 2.4855e-07 1.0000e+00 weaklyHypermeth 0.11237777 1.2228e-04 lowCoverage 6.4356e-03 lowCoverage 0.125497 0.164570 -0.0878910 5 0.12287 0.287821 -0.16495547 7.0456e-01 1.2187e-11 weaklyHypometh 1.0000e+00 3.0467e-09 weaklyHypometh 4.4937e-01 6.7454e-04 weaklyHypometh 1.0000e+00 6.9134e-02 weaklyHypometh -0.1568547 4.6488e-04 lowCoverage 0.03873963 lowCoverage 0.117222 0.012346 0.1039171 5 0.264093 0.095669 0.1684239 1.1625e-08 1.0000e+00 weaklyHypermeth 2.7679e-07 1.0000e+00 weaklyHypermeth 1.7762e-06 1.0000e+00 weaklyHypermeth 7.7228e-05 1.0000e+00 weaklyHypermeth 0.1114548 1.5204e-03 lowCoverage 5.4301e-02 lowCoverage 0.116732 0.164570 -0.10223535 5 0.116912 0.287821 -0.1709087 9.0044e-01 5.3925e-12 weaklyHypometh 1.0000e+00 1.0785e-09 weaklyHypometh 9.6847e-01 2.7123e-03 weaklyHypometh 1.0000e+00 3.3903e-01 insignificant -0.1577776 6.9783e-04 lowCoverage 0.099690 lowCoverage 0.011676 0.164570 -0.1831627 5 0.014803 0.287821 -0.2730174 0.99999987 1.9140e-18 weaklyHypometh 1.000000 1.9140e-16 weaklyHypometh 0.9999191 3.1377e-07 weaklyHypometh 1 2.6147e-05 weaklyHypometh -0.2692325 4.9597e-05 lowCoverage 0.0070853 lowCoverage chr6 3182550 3183550 22877 TUBB2B ENSG00000137285 0.869091 47 5 0.607602 85 5 0.62286 24 4 0.716288 52 4 0.808333 28 4 0.67141 80 6 0.783333 27 4 0.826531 52 4 0.693750 27 1 0.800000 24 4 0.749343 89 5 0.333333 13 0 0.711538 40 5 0.730556 34 4 0.771429 25 4 0.937500 9 0 0.666667 3 0 0.670317 48 5 0.760234 50 5 0.80878 69 5 0.683333 26 4 0.625000 7 0 0.584848 29 4 0.673333 43 4 0.726190 32 4 0.667735 52 4 0.644751 86 6 0.473775 38 2 0.708333 49 5 0.800000 62 4 0.732540 55 4 0.781250 62 4 0.6021825 71 4 0.4548611 35 4 0.8346088 78 5 0.9000000 13 0 0.4679470 145 6 0.491646 76 4 0.70824 63 4 0.641941 72 4 0.858521 86 4 0.783333 17 1 0.750000 52 4 0.887097 0.511064 0.532719 0.649071 0.810215 0.711716 0.731183 0.697005 0.887903 0.751613 0.685379 0.424731 0.693135 0.663978 0.711521 0.935484 0.723163 0.585868 0.746544 0.715370 0.700000 0.620968 0.631378 0.679032 0.662826 0.750310 0.728652 0.413978 0.560484 0.750538 0.723502 0.672379 0.7158218 0.451613 0.7379032 0.87500000 0.458130 0.6130649 0.636433 0.711095 0.822328 0.729839 0.689516 0 0.709443 0.696858 0.00870534 4 0.73573 0.620706 0.11502779 1.1744e-01 7.7845e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 2.5642e-01 9.8646e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.05185405 0.17920411 lowCoverage 1.00000 lowCoverage 0.708738 0.648325 0.06737936 4 0.69798 0.645496 0.05248493 5.7492e-03 9.8339e-01 lowCoverage 4.8313e-02 1.0000e+00 lowCoverage 4.6348e-02 9.8769e-01 lowCoverage 3.9278e-01 1.0000e+00 lowCoverage 0.10173728 2.7247e-01 lowCoverage 1.0000e+00 lowCoverage 0.709402 0.751724 -0.0413533 4 0.71431 0.648447 0.06586463 5.3536e-01 1.4394e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 5.4498e-01 2.7790e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0214614 6.4883e-01 lowCoverage 1.00000000 lowCoverage 0.696296 0.648325 0.0605338 5 0.566521 0.645496 -0.0789754 4.7076e-02 9.9440e-01 weaklyHypermeth 3.3387e-01 1.0000e+00 insignificant 2.0115e-01 8.9925e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0498832 5.7359e-01 lowCoverage 1.0000e+00 lowCoverage 0.698885 0.751724 -0.03725552 4 0.660941 0.648447 0.0124942 8.0886e-01 3.6060e-02 lowCoverage 1.0000e+00 9.1768e-01 lowCoverage 7.8398e-01 2.2456e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0733155 1.3593e-01 lowCoverage 1.000000 lowCoverage 0.647482 0.751724 -0.0981585 4 0.586412 0.648447 -0.0620345 0.95796302 4.8071e-04 lowCoverage 1.000000 7.7533e-03 lowCoverage 0.9691537 6.3100e-02 lowCoverage 1 6.0911e-01 lowCoverage -0.1231987 2.0360e-01 lowCoverage 1.0000000 lowCoverage chr6 3237750 3238750 22879 ENSG00000215071 0.921689 316 11 0.842272 484 9 0.82083 143 9 0.945865 327 11 0.808208 86 10 0.87200 541 9 0.790136 187 7 0.856710 223 9 0.826219 220 9 0.887013 102 9 0.844133 481 9 0.817460 62 7 0.813407 254 9 0.851406 118 9 0.848853 177 9 0.904762 66 7 0.750000 4 0 0.831095 505 9 0.968915 106 9 0.80679 456 9 0.880383 129 9 0.950855 143 9 0.850002 195 9 1.000000 117 9 0.957061 119 7 0.856855 360 11 0.860674 145 9 0.828571 47 6 0.859775 206 9 0.874461 369 9 0.881210 352 9 0.893021 531 9 0.9279548 216 9 0.8783217 116 9 1.0000000 21 2 0.8111111 31 3 0.9091026 191 9 0.867028 322 9 0.96983 186 11 0.951978 327 9 0.894110 272 11 0.953057 172 11 0.883195 326 11 0.925807 0.816874 0.907215 0.926822 0.889572 0.924061 0.877890 0.949185 0.928629 0.937715 0.938485 0.896134 0.933651 0.897937 0.934016 0.898933 NA 0.922740 0.973968 0.929246 0.973019 0.958958 0.940531 1.000000 0.966235 0.944274 0.854586 0.913456 0.960119 0.943661 0.945980 0.952132 0.9241508 0.883043 0.9560030 0.87209333 0.920568 0.9085598 0.966430 0.939081 0.897765 0.939572 0.899538 7 0.908155 0.938053 -0.02934565 9 0.86112 0.878530 -0.01740650 9.5844e-01 2.3386e-02 weaklyHypometh 1.0000e+00 7.6958e-01 insignificant 9.9024e-01 4.1393e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.04068401 0.04322898 weaklyHypometh 1.00000 insignificant 0.908155 0.905134 0.00587474 9 0.86112 0.857287 0.00383566 3.8263e-01 8.2830e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.0142e-01 8.6916e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04853123 1.3264e-01 insignificant 1.0000e+00 insignificant 0.908079 0.938426 -0.0193815 9 0.84955 0.922544 -0.07299430 8.7049e-01 7.1238e-04 weaklyHypometh 1.0000e+00 3.9576e-02 weaklyHypometh 7.9884e-01 5.9821e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0800452 5.0258e-03 weaklyHypometh 0.19329827 insignificant 0.937707 0.905240 0.0347037 9 0.815778 0.867481 -0.0517037 9.7121e-02 9.9973e-01 insignificant 6.4748e-01 1.0000e+00 insignificant 5.4684e-01 9.9953e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0078472 7.9960e-01 insignificant 1.0000e+00 insignificant 0.938007 0.938426 0.00913567 9 0.868407 0.922544 -0.0541373 6.8945e-01 1.7603e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.7637e-01 6.6125e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0393612 1.1614e-01 insignificant 1.000000 insignificant 0.905028 0.938426 -0.0235268 9 0.845395 0.922544 -0.0771496 0.97934283 2.5708e-01 insignificant 1.000000 1.0000e+00 insignificant 0.9834276 7.6578e-01 insignificant 1 1.0000e+00 insignificant -0.0315140 3.4252e-01 insignificant 1.0000000 insignificant chr6 3293250 3294250 22882 ENSG00000215071 0.935335 364 6 0.878481 89 6 0.92431 71 6 0.958147 293 6 0.943878 53 6 0.96009 333 6 0.872501 101 6 0.874383 107 6 0.913510 96 6 0.900192 72 6 0.919818 190 6 0.858586 40 4 0.947487 106 6 1.000000 12 2 0.949017 78 6 0.800000 25 2 0.800000 19 2 0.703604 453 6 0.922619 121 6 0.94728 276 6 0.961738 57 6 0.962343 114 6 0.795558 165 6 0.794718 69 5 0.963382 309 5 0.947781 145 6 0.911262 112 6 0.920207 81 6 0.940366 127 6 0.941626 139 6 0.985653 127 6 0.946149 300 6 0.9663300 100 6 0.9812271 88 4 0.8333333 86 6 0.8866758 194 4 0.9588678 84 6 0.719603 201 6 0.96675 249 6 0.966241 188 6 0.944120 288 6 0.960704 393 6 0.971235 229 6 0.937082 0.848651 0.914407 0.960085 0.950666 0.949334 0.854314 0.893970 0.906740 0.907102 0.905305 0.884780 0.944077 0.942382 0.950052 0.825424 0.775215 0.935965 0.924738 0.942144 0.959136 0.959137 0.919354 0.909462 0.958512 0.947676 0.909096 0.922639 0.928125 0.936086 0.984396 0.946534 0.9646750 0.981235 0.8531073 0.83805954 0.939812 0.6935517 0.963637 0.959308 0.925866 0.959138 0.966543 4 0.926526 0.935817 -0.00843234 6 0.81046 0.904276 -0.09381322 5.7384e-01 2.2741e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.1803e-01 3.1873e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.02210408 0.36199791 insignificant 1.00000 insignificant 0.926846 0.808765 0.11786210 6 0.92624 0.860480 0.06576291 2.6602e-05 1.0545e-01 weaklyHypermeth 3.2442e-04 1.0000e+00 weaklyHypermeth 9.3311e-01 1.5195e-02 inconclusive 1.0000e+00 8.9772e-01 insignificant 0.00945514 8.3680e-01 insignificant 1.0000e+00 insignificant 0.926846 0.953229 -0.0275231 6 0.92624 0.965853 -0.03960915 9.9397e-01 2.6847e-02 weaklyHypometh 1.0000e+00 5.5826e-01 insignificant 9.8469e-01 1.3691e-02 weaklyHypometh 1.0000e+00 4.5358e-01 insignificant -0.0613488 1.0087e-03 weaklyHypometh 0.06304286 weaklyHypometh 0.935780 0.808765 0.1228543 6 0.890601 0.860480 0.0301209 4.1539e-04 2.5504e-01 weaklyHypermeth 4.9452e-03 1.0000e+00 weaklyHypermeth 5.8386e-01 5.7505e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0315592 5.0653e-01 insignificant 1.0000e+00 insignificant 0.935780 0.953229 -0.02053204 6 0.890601 0.965853 -0.0752512 9.7503e-01 4.8346e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.2788e-01 1.6224e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0392448 5.7049e-02 insignificant 1.000000 insignificant 0.808765 0.953229 -0.1465187 6 0.860480 0.965853 -0.1053721 0.24361813 2.8519e-02 weaklyHypometh 1.000000 2.4585e-01 insignificant 0.2010463 8.3149e-01 insignificant 1 1.0000e+00 insignificant -0.0708040 1.4766e-01 insignificant 1.0000000 insignificant chr6 3372450 3373450 22893 ENSG00000215071 0.881778 267 7 0.736847 177 7 0.65099 93 7 0.912009 182 7 0.771296 101 7 0.85114 397 8 0.852941 51 4 0.737431 164 8 0.666667 18 1 0.767857 18 1 0.867022 188 7 0.641667 30 4 0.899576 126 7 0.761905 62 6 0.833333 6 0 0.595833 43 5 0.842517 31 3 0.709240 139 4 0.607143 39 3 0.81664 280 8 0.865010 70 6 0.718345 166 8 0.912221 134 8 0.757716 101 7 0.902083 137 8 0.687703 131 8 0.851387 85 5 0.809524 24 1 0.484127 19 1 0.886951 109 7 0.802759 197 8 0.757513 349 8 0.3202030 195 7 0.1162216 137 7 0.2916667 295 7 0.8000000 21 4 0.3169722 175 9 0.641167 187 8 0.77564 181 8 0.845100 158 8 0.776840 168 8 1.000000 10 1 0.768323 98 5 0.874779 0.805889 0.739074 0.917985 0.874427 0.919555 0.900093 0.913246 0.724868 0.837078 0.889085 0.725926 0.947314 0.843254 0.841270 0.817460 0.806040 0.825089 0.605820 0.860774 0.856016 0.752568 0.949735 0.887125 0.905423 0.867794 0.862521 0.994709 0.685185 0.837329 0.905103 0.887608 0.4440696 0.320443 0.0187891 0.76482083 0.264937 0.5953088 0.896902 0.833997 0.904530 NA 0.781851 1 0.848259 0.854139 -0.01150851 8 0.77942 0.790509 -0.01108736 8.5741e-01 3.1979e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.5361e-01 2.1242e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01608693 0.69976855 insignificant 1.00000 insignificant 0.848259 0.300000 0.52453489 8 0.77942 0.339300 0.44012169 2.2119e-35 9.9990e-01 hypermethylated 2.4577e-33 1.0000e+00 hypermethylated 1.4031e-09 9.9938e-01 hypermethylated 1.1693e-07 1.0000e+00 hypermethylated 0.35581955 1.7626e-02 weaklyHypermeth 2.7541e-01 insignificant 0.848259 0.856911 0.0022535 8 0.77942 0.744007 0.03541454 3.0946e-01 6.7174e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.5645e-01 7.8116e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0629883 2.4671e-01 insignificant 1.00000000 insignificant 0.854139 0.300000 0.5089292 8 0.790509 0.339300 0.4512090 9.6256e-26 9.9994e-01 hypermethylated 8.7506e-24 1.0000e+00 hypermethylated 7.5441e-09 9.9952e-01 hypermethylated 6.0109e-07 1.0000e+00 hypermethylated 0.3719065 1.3937e-02 weaklyHypermeth 2.3679e-01 insignificant 0.854139 0.856911 0.01252789 8 0.790509 0.744007 0.0465019 2.5753e-01 7.2215e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.9726e-01 8.3658e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0469014 4.2306e-01 insignificant 1.000000 insignificant 0.300000 0.856911 -0.5069307 8 0.339300 0.744007 -0.4047071 0.97374868 5.5620e-11 hypomethylated 1.000000 3.4762e-09 hypomethylated 0.9990474 5.5033e-05 hypomethylated 1 2.5015e-03 hypomethylated -0.4188079 8.1010e-03 weaklyHypometh 0.2189448 insignificant chr6 3471950 3472950 22903 SLC22A23 ENSG00000137266 0.785253 250 6 0.812958 399 6 0.81454 205 6 0.899644 250 4 0.885279 135 6 0.81935 369 6 0.917357 190 6 0.848952 259 6 0.861455 198 5 0.813752 135 6 0.876781 245 6 0.855902 100 6 0.746075 174 6 0.873016 142 4 0.885873 207 6 0.832407 49 4 0.825000 29 3 0.799883 314 5 0.875216 225 6 0.90255 253 6 0.965306 69 6 0.834699 73 4 0.895324 178 6 0.716898 88 5 0.938095 27 4 0.900403 294 6 0.951069 96 5 0.890475 135 6 0.775867 220 6 0.868483 395 6 0.862776 286 6 0.903168 295 6 0.8260861 197 6 0.7720665 106 6 0.6379310 117 4 0.4000000 13 1 0.7759301 172 5 0.408947 274 6 0.84927 269 5 0.772754 173 6 0.710008 158 4 0.732680 172 5 0.858048 203 5 0.847603 0.813978 0.815438 0.888317 0.878618 0.875540 0.915513 0.868599 0.806626 0.842803 0.894215 0.841004 0.839729 0.865898 0.855879 0.829051 0.856159 0.825001 0.888792 0.885670 0.948165 0.759280 0.917575 0.924000 0.931242 0.904078 0.928077 0.898462 0.862296 0.880613 0.899966 0.895345 0.7810931 0.688658 0.3767881 0.26996047 0.703997 0.3429553 0.817230 0.803284 0.770688 0.799774 0.808532 4 0.852955 0.889610 -0.03401402 6 0.82767 0.868193 -0.04052576 9.0900e-01 4.0629e-04 weaklyHypometh 1.0000e+00 5.3833e-02 weaklyHypometh 9.9799e-01 4.6947e-04 weaklyHypometh 1.0000e+00 1.5649e-01 insignificant -0.02865166 0.23009786 insignificant 1.00000 insignificant 0.853091 0.626849 0.23246121 6 0.85450 0.678878 0.17562283 1.6458e-10 9.9721e-01 hypermethylated 4.2201e-09 1.0000e+00 hypermethylated 2.3386e-04 9.8960e-01 hypermethylated 4.8720e-03 1.0000e+00 hypermethylated 0.20973514 4.2674e-02 lowCoverage 5.0204e-01 lowCoverage 0.852955 0.809231 0.0414532 5 0.82767 0.697515 0.13015243 2.2685e-04 6.8052e-01 weaklyHypermeth 1.6204e-02 1.0000e+00 weaklyHypermeth 1.0478e-02 5.4426e-01 weaklyHypermeth 6.1878e-01 1.0000e+00 insignificant 0.0620107 1.0782e-01 insignificant 1.00000000 insignificant 0.889767 0.626849 0.2653838 6 0.874003 0.678878 0.1951251 1.7266e-08 9.7799e-01 hypermethylated 4.0153e-07 1.0000e+00 hypermethylated 1.5654e-04 9.9756e-01 hypermethylated 3.9135e-03 1.0000e+00 hypermethylated 0.2383868 2.6702e-02 lowCoverage 3.7609e-01 lowCoverage 0.889610 0.809231 0.07463633 5 0.868193 0.697515 0.1706782 2.4357e-05 9.9674e-01 weaklyHypermeth 2.0297e-03 1.0000e+00 weaklyHypermeth 1.5248e-03 9.9337e-01 weaklyHypermeth 1.3862e-01 1.0000e+00 insignificant 0.0906623 3.7425e-02 weaklyHypermeth 0.970640 insignificant 0.626849 0.810062 -0.1973544 5 0.678878 0.813767 -0.1348894 0.98155616 1.4725e-02 weaklyHypometh 1.000000 1.4725e-01 insignificant 0.9951231 3.0053e-02 weaklyHypometh 1 3.4945e-01 insignificant -0.1477245 1.2350e-01 lowCoverage 1.0000000 lowCoverage chr6 3556650 3557650 22905 SLC22A23 ENSG00000137266 0.727812 122 5 0.517262 78 5 0.58571 42 5 0.734373 104 5 0.771970 48 3 0.80960 107 5 0.625108 53 7 0.653297 73 5 0.599134 57 6 0.611111 21 0 0.690210 136 5 0.745238 30 4 0.635714 73 6 0.632653 43 6 0.688889 23 3 0.614286 20 2 0.500000 5 0 0.681328 115 4 0.713939 67 5 0.64232 85 5 0.507937 45 4 0.708333 16 0 0.618764 69 6 0.515246 56 5 0.487179 91 6 0.683660 89 5 0.420583 84 6 0.413690 42 4 0.525794 47 5 0.649538 110 5 0.559542 111 5 0.743519 99 5 0.5642857 74 6 0.6800000 50 5 0.6214425 101 5 0.9055556 20 2 0.4757267 65 6 0.510204 60 5 0.75037 111 5 0.647525 129 5 0.521510 137 6 0.750000 52 2 0.609524 126 5 0.721895 0.710880 0.567460 0.731440 0.808081 0.697233 0.686700 0.608476 0.552076 0.666667 0.718526 0.684127 0.646296 0.645503 0.622222 0.688889 NA 0.802286 0.702357 0.770690 0.672840 0.833333 0.703704 0.608123 0.683761 0.679375 0.560765 0.647487 0.731481 0.639830 0.777806 0.733333 0.5854701 0.666667 0.7206628 0.92129630 0.592713 0.7341270 0.693029 0.667837 0.729640 0.750000 0.723721 0 0.689708 0.633295 0.03081335 5 0.68122 0.535253 0.14596871 1.5705e-02 9.8085e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 3.5819e-02 9.8195e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.08951619 0.02438125 lowCoverage 1.00000 lowCoverage 0.689761 0.654054 0.03697887 5 0.68284 0.662074 0.02076477 1.2446e-01 9.7170e-01 insignificant 8.2391e-01 1.0000e+00 insignificant 1.5251e-01 9.6604e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03279587 6.3710e-01 lowCoverage 1.0000e+00 lowCoverage 0.690347 0.711712 -0.0039695 5 0.70569 0.583253 0.12244070 2.6231e-01 8.2242e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.0721e-01 9.4280e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0032122 9.4808e-01 lowCoverage 1.00000000 lowCoverage 0.636257 0.654054 0.0084199 5 0.594725 0.662074 -0.0673486 5.5502e-01 6.2248e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.1695e-01 7.7368e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0567203 4.4855e-01 lowCoverage 1.0000e+00 lowCoverage 0.636577 0.711712 -0.01959515 5 0.606566 0.583253 0.0233131 9.1824e-01 4.4006e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.1975e-01 5.7513e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0863040 1.4628e-01 lowCoverage 1.000000 lowCoverage 0.653117 0.711712 -0.0338291 5 0.619833 0.583253 0.0365803 0.80220611 4.1302e-01 insignificant 1.000000 1.0000e+00 insignificant 0.9469832 6.9724e-01 insignificant 1 1.0000e+00 insignificant -0.0295836 7.1037e-01 lowCoverage 1.0000000 lowCoverage chr6 3758650 3759650 22913 ENSG00000219992 0.935894 232 5 0.535699 136 5 0.90368 107 5 0.804160 203 5 0.492441 82 5 0.77290 337 5 0.543851 144 5 0.779517 112 5 0.845408 112 5 0.950493 117 5 0.889421 131 5 0.887912 90 5 0.984000 81 5 0.753333 28 1 0.884037 117 5 0.862745 57 4 0.864268 41 4 0.766815 258 5 0.820783 132 5 0.75409 227 5 0.874036 56 5 0.840608 152 5 0.931613 124 5 0.680136 126 5 0.946809 171 5 0.823685 171 5 0.867830 98 5 0.690386 61 5 0.812335 107 4 0.897134 164 5 0.905798 151 5 0.924644 261 5 0.9439401 110 5 0.8381688 136 5 0.9821429 57 4 0.8295991 115 4 0.7803766 102 5 0.976086 138 5 0.92898 298 5 0.973207 219 5 0.786089 231 5 0.932917 262 5 0.955533 344 5 0.928297 0.741407 0.884916 0.961003 0.859345 0.875090 0.884335 0.886711 0.842867 0.924537 0.873272 0.889691 0.979419 0.831919 0.889040 0.840046 0.873946 0.919595 0.817517 0.896927 0.812073 0.846503 0.913950 0.809107 0.937433 0.847538 0.801073 0.822904 0.967587 0.880596 0.897626 0.884582 0.9354157 0.837523 0.9784776 0.86209323 0.931621 0.9714132 0.923176 0.957996 0.932416 0.926489 0.948615 4 0.882932 0.848263 0.01101111 5 0.67217 0.767654 -0.09548222 8.4433e-01 6.4666e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3749e-01 6.4151e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04801242 0.23586457 lowCoverage 1.00000 lowCoverage 0.885547 0.889058 -0.00751008 5 0.77041 0.739840 0.03056979 3.8013e-01 3.3758e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.7035e-01 9.4124e-03 weaklyHypometh 1.0000e+00 7.2403e-01 insignificant -0.09014683 7.4599e-02 lowCoverage 7.4599e-01 lowCoverage 0.883492 0.937223 -0.0501308 5 0.67424 0.839178 -0.16494216 9.9839e-01 5.8021e-03 weaklyHypometh 1.0000e+00 2.2815e-01 insignificant 9.9914e-01 7.0372e-03 weaklyHypometh 1.0000e+00 2.7066e-01 insignificant -0.1137722 2.7331e-02 lowCoverage 0.57277783 lowCoverage 0.874051 0.889058 -0.0201654 5 0.891933 0.739840 0.1520932 9.0020e-01 5.4841e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7710e-01 4.9952e-03 weaklyHypometh 1.0000e+00 3.8425e-01 insignificant -0.0421344 3.5321e-01 lowCoverage 1.0000e+00 lowCoverage 0.848503 0.937223 -0.06058305 5 0.805524 0.839178 -0.0336541 9.9924e-01 2.8483e-02 weaklyHypometh 1.0000e+00 7.9119e-01 insignificant 9.9717e-01 9.7749e-03 weaklyHypometh 1.0000e+00 6.9366e-01 insignificant -0.0657598 1.5062e-01 lowCoverage 1.000000 lowCoverage 0.889058 0.937870 -0.0421799 5 0.739840 0.952238 -0.2123974 0.44016234 3.0806e-01 insignificant 1.000000 1.0000e+00 insignificant 0.3805893 7.1490e-01 insignificant 1 1.0000e+00 insignificant -0.0236254 6.3744e-01 lowCoverage 1.0000000 lowCoverage chr6 4565250 4566250 22944 ENSG00000205444 0.802550 230 6 0.786722 248 6 0.68415 154 6 0.813734 226 6 0.841579 131 6 0.77925 316 6 0.846861 151 6 0.808248 144 6 0.769185 124 6 0.857168 92 6 0.827128 300 6 0.836299 61 6 0.679493 146 6 0.842920 79 6 0.855022 165 5 0.726768 40 4 0.750000 16 0 0.654124 192 6 0.830156 241 6 0.83357 279 6 0.749026 60 6 0.798412 80 5 0.721627 122 6 0.885115 108 6 0.919444 49 5 0.818082 249 6 0.740112 140 6 0.763039 71 5 0.862267 201 6 0.700476 249 6 0.829760 221 6 0.828375 266 6 0.6392452 202 6 0.6303092 138 5 0.7799908 162 6 0.7222222 12 1 0.6217742 288 6 0.795820 254 6 0.80003 248 6 0.799530 201 6 0.683246 156 6 0.774326 141 6 0.808983 176 6 0.815735 0.808098 0.710326 0.840281 0.838835 0.810183 0.879813 0.838407 0.782585 0.854197 0.854158 0.850395 0.694185 0.864433 0.842520 0.726391 0.796696 0.809661 0.856981 0.859100 0.784120 0.836661 0.868150 0.889287 0.926298 0.853031 0.753612 0.816289 0.858201 0.848688 0.819863 0.845840 0.6456490 0.637769 0.8072964 0.77868852 0.644281 0.7660406 0.833322 0.843206 0.797160 0.817347 0.827800 5 0.819490 0.838656 -0.02328769 6 0.79056 0.796046 -0.00548134 9.4341e-01 3.9938e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.4210e-01 6.7136e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01006470 0.68006374 insignificant 1.00000 insignificant 0.819490 0.670455 0.13426379 6 0.79056 0.735576 0.05498852 2.3396e-08 9.9550e-01 weaklyHypermeth 4.6793e-07 1.0000e+00 weaklyHypermeth 7.4774e-03 9.8666e-01 weaklyHypermeth 9.5064e-02 1.0000e+00 weaklyHypermeth 0.09301944 3.2186e-02 weaklyHypermeth 4.2915e-01 insignificant 0.819490 0.807609 0.0047150 6 0.79056 0.817876 -0.02731139 1.7446e-01 2.2255e-02 inconclusive 1.0000e+00 5.1756e-01 insignificant 2.3866e-01 8.3311e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0180227 5.2634e-01 insignificant 1.00000000 insignificant 0.838656 0.670455 0.1656218 6 0.796046 0.735576 0.0604699 1.8714e-08 9.9410e-01 weaklyHypermeth 4.2531e-07 1.0000e+00 weaklyHypermeth 7.3202e-03 9.8788e-01 weaklyHypermeth 9.3849e-02 1.0000e+00 weaklyHypermeth 0.1030841 2.2877e-02 weaklyHypermeth 3.4345e-01 insignificant 0.838656 0.807609 0.02374776 6 0.796046 0.817876 -0.0218300 1.4128e-01 5.1372e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.5447e-01 7.9198e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0280874 3.7779e-01 insignificant 1.000000 insignificant 0.670455 0.807609 -0.1393815 6 0.735576 0.817876 -0.0822999 0.79131551 2.3052e-05 weaklyHypometh 1.000000 5.2392e-04 weaklyHypometh 0.9041617 6.8949e-02 insignificant 1 6.4439e-01 insignificant -0.0749967 9.1669e-02 insignificant 0.8600749 insignificant chr6 4978050 4979050 22968 RPP40 ENSG00000124787 0.480815 481 8 0.366616 512 8 0.38921 326 9 0.336843 399 8 0.405409 251 9 0.40766 656 8 0.430077 287 8 0.470605 406 9 0.328694 296 7 0.566908 357 10 0.613596 484 9 0.344936 192 7 0.285186 460 8 0.391553 241 8 0.336382 407 8 0.384862 135 6 0.119048 50 5 0.401705 579 8 0.386484 481 8 0.35206 536 8 0.475769 86 6 0.200162 173 5 0.385834 293 8 0.336817 199 10 0.399855 134 6 0.399730 577 8 0.304871 477 9 0.283166 163 8 0.323366 440 8 0.418199 618 8 0.449683 526 8 0.491323 481 8 0.3207834 412 9 0.2053669 318 8 0.4193552 357 6 0.2939560 73 4 0.1965954 276 9 0.171619 552 8 0.41412 555 8 0.462827 456 8 0.440222 493 8 0.308098 496 8 0.500095 347 8 0.447827 0.214096 0.328754 0.312307 0.279505 0.463866 0.292737 0.284493 0.249799 0.392215 0.461556 0.236208 0.176571 0.364875 0.262658 0.216370 0.199342 0.315184 0.185288 0.263380 0.472006 0.251750 0.365349 0.333896 0.365657 0.381326 0.231138 0.256990 0.293858 0.351521 0.319403 0.395830 0.1323929 0.107865 0.2439056 0.21429309 0.154836 0.1011789 0.331902 0.330893 0.331379 0.275747 0.379988 6 0.392303 0.444924 -0.01519209 8 0.45594 0.349700 0.10624167 2.2874e-01 6.6937e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.8121e-01 5.5002e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01753458 0.60559922 insignificant 1.00000 insignificant 0.392061 0.261701 0.20653057 8 0.45594 0.228646 0.22729571 3.9500e-16 9.2760e-01 hypermethylated 1.7954e-14 1.0000e+00 hypermethylated 9.7281e-07 9.9024e-01 hypermethylated 4.0534e-05 1.0000e+00 hypermethylated 0.12198658 2.3956e-02 weaklyHypermeth 3.4223e-01 insignificant 0.391998 0.460588 -0.0210011 8 0.45683 0.387825 0.06900124 3.8960e-01 4.5514e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.5052e-01 5.5883e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0351389 3.9981e-01 insignificant 1.00000000 insignificant 0.444791 0.261725 0.2233091 8 0.299677 0.227004 0.0726736 4.2140e-19 6.5288e-01 hypermethylated 2.4788e-17 1.0000e+00 hypermethylated 4.8326e-07 7.9878e-01 hypermethylated 2.4537e-05 1.0000e+00 hypermethylated 0.1044520 4.7874e-02 weaklyHypermeth 5.3791e-01 insignificant 0.445433 0.460554 -0.00088981 8 0.324650 0.378477 -0.0538269 2.8051e-01 5.0739e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.9882e-01 6.5697e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0526735 2.2917e-01 insignificant 1.000000 insignificant 0.261833 0.460588 -0.2413094 8 0.246234 0.387825 -0.1415907 0.76151902 2.3226e-10 hypomethylated 1.000000 1.3662e-08 hypomethylated 0.9681937 1.7439e-04 hypomethylated 1 6.2283e-03 hypomethylated -0.1571255 1.2464e-02 weaklyHypometh 0.2709457 insignificant chr6 5216050 5217050 22974 FARS2 ENSG00000145982 0.689040 302 7 0.517642 82 7 0.71865 73 7 0.722540 127 7 0.540909 71 7 0.73165 222 7 0.795918 80 6 0.705857 79 6 0.594676 88 7 0.782468 73 6 0.691906 124 7 0.668376 68 7 0.638203 62 7 NA 0 0 0.817510 94 7 0.772109 63 7 0.731493 107 7 0.723044 135 7 0.673004 198 7 0.79055 192 7 0.848052 62 7 0.834467 48 7 0.734454 109 7 0.579082 32 3 0.666667 52 7 0.622619 174 7 0.761905 50 6 0.684014 35 4 0.694118 53 3 0.673792 198 7 0.738746 190 7 0.776706 337 7 0.7545948 75 4 0.7121767 70 6 0.7146771 131 7 0.6611578 108 7 0.7578231 45 7 0.599001 176 7 0.74276 342 7 0.838876 169 7 0.749547 159 7 0.686203 208 7 0.769238 239 7 0.686096 0.513414 0.732673 0.720505 0.566290 0.706056 0.762870 0.725700 0.632191 0.767977 0.686450 0.671398 0.633395 NA 0.782888 0.782368 0.745654 0.701554 0.693397 0.768777 0.813907 0.790390 0.723884 0.634459 0.639459 0.643726 0.732883 0.752523 0.713390 0.671492 0.732836 0.749785 0.7044887 0.679361 0.7415764 0.66389684 0.731892 0.5983683 0.731749 0.846910 0.764419 0.665787 0.796692 5 0.715179 0.716418 -0.02802181 7 0.70320 0.737219 -0.03401738 9.1953e-01 1.7258e-02 weaklyHypometh 1.0000e+00 7.1909e-01 insignificant 8.8239e-01 1.0077e-02 weaklyHypometh 1.0000e+00 7.7513e-01 insignificant -0.01759319 0.56234205 insignificant 1.00000 insignificant 0.715179 0.659504 0.04025263 7 0.70320 0.663339 0.03986262 3.0164e-02 9.8695e-01 weaklyHypermeth 2.2679e-01 1.0000e+00 insignificant 1.4118e-01 8.3670e-01 insignificant 9.9419e-01 1.0000e+00 insignificant 0.00038669 9.9031e-01 insignificant 1.0000e+00 insignificant 0.715179 0.791406 -0.0536126 7 0.70320 0.756015 -0.05281326 9.9577e-01 5.9318e-03 weaklyHypometh 1.0000e+00 2.2815e-01 insignificant 9.9914e-01 6.6218e-03 weaklyHypometh 1.0000e+00 2.6487e-01 insignificant -0.0570324 9.7926e-02 insignificant 1.00000000 insignificant 0.716418 0.659504 0.0647889 7 0.737219 0.663339 0.0738800 5.7761e-05 9.8557e-01 weaklyHypermeth 8.6210e-04 1.0000e+00 weaklyHypermeth 1.1950e-02 9.0466e-01 weaklyHypermeth 1.4058e-01 1.0000e+00 insignificant 0.0179799 6.0535e-01 insignificant 1.0000e+00 insignificant 0.716418 0.791406 -0.02513222 7 0.737219 0.756015 -0.0187959 6.7925e-01 9.5165e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 6.6065e-01 3.9918e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0394392 2.6845e-01 insignificant 1.000000 insignificant 0.659504 0.791406 -0.0958363 7 0.663339 0.756015 -0.0926759 0.99957361 3.1298e-04 weaklyHypometh 1.000000 5.3047e-03 weaklyHypometh 0.9971458 1.5991e-02 weaklyHypometh 1 2.1610e-01 insignificant -0.0574191 1.3491e-01 insignificant 1.0000000 insignificant chr6 7095450 7096450 23053 RREB1 ENSG00000124782 0.5885206 159 5 0.3833333 72 5 0.58238636 97 5 0.6026832 119 5 0.5681818 68 5 0.6694514 184 5 0.6392593 70 5 0.6607885 91 5 0.4775510 119 5 0.7111111 119 5 0.7098413 97 5 0.5576923 52 2 0.2391321 175 5 0.6588235 80 2 0.4505556 111 5 0.7856923 63 2 0.3975758 38 5 0.5376812 166 5 0.4116162 34 2 0.4711255 115 5 0.8333333 30 2 0.3924027 119 5 0.598684 96 5 0.761282 77 5 0.5773333 60 2 0.4998284 115 5 0.5007937 83 5 0.4041866 51 4 0.314478 56 2 0.2189466 143 5 0.5200000 115 5 0.6262328 149 5 0.8121429 86 5 0.7291667 45 2 1.00000000 50 2 0.6282828 26 2 0.882098 54 5 0.7395441 101 5 0.84403761 93 2 0.6562500 109 2 0.36601307 166 2 0.4023419 133 2 0.6231141 109 5 0.5482472 0.4847756 0.55246576 0.6376230 0.5166770 0.7346679 0.6393162 0.7471740 0.5311355 0.6601140 0.6950041 0.5572737 0.3194150 0.64404223 0.5198540 0.6388462 0.3932401 0.6463443 0.4873737 0.4982004 0.574786 0.3792062 0.713071 0.65548159 0.5938034 0.5274492 0.6246642 0.47145713 0.4784059 0.2487450 0.5777778 0.6793495 0.8129121 0.7323600 1.00000000 5.7466e-01 0.8105836 0.7102325 0.6592573 0.5791934 0.3851234 0.5982856 0.7514868 2 0.5791030 0.5265082 0.0482115 5 0.5328516 0.481161 0.0516910 0.1411672 0.9871476 insignificant 1 1.00000 insignificant 0.64490290 0.84425964 insignificant 1.00000 1.00000 insignificant 0.0345250 0.5660206 lowCoverage 1 lowCoverage 0.5794669 0.7928177 -0.21597413 5 0.5727553 0.8131447 -0.24038943 9.9976e-01 2.1692e-09 hypomethylated 1.0000e+00 3.6154e-07 hypomethylated 9.9986e-01 1.1605e-06 hypomethylated 1.0000e+00 2.3209e-04 hypomethylated -0.24338894 3.6101e-03 lowCoverage 1.1645e-01 lowCoverage 0.5791030 0.5721311 0.0100251 2 0.5328516 0.6103697 -0.0775181 8.3517e-02 2.5727e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 6.2916e-01 2.2897e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.02320122 8.1295e-01 lowCoverage 1.00000000 lowCoverage 0.5270394 0.7928177 -0.26739993 5 0.510726 0.8131447 -0.3024186 9.9998e-01 4.7087e-08 hypomethylated 1.0000e+00 7.9887e-06 hypomethylated 9.9996e-01 2.0996e-05 hypomethylated 1.0000e+00 4.1991e-03 hypomethylated -0.27791391 2.2334e-03 lowCoverage 9.2546e-02 lowCoverage 0.5265082 0.5721311 -0.02958209 2 0.481161 0.6103697 -0.1292091 4.3189e-01 1.4055e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.7261e-01 1.9269e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0577262 5.8797e-01 lowCoverage 1.0000000 lowCoverage 0.7928177 0.5714286 0.22241817 2 0.8131447 0.5324437 0.28070101 1.1895e-04 1.0000e+00 lowCoverage 1.5303e-02 1.0000e+00 lowCoverage 9.3483e-03 9.9996e-01 lowCoverage 1.00000000 1.0000000 lowCoverage 0.22018771 7.0951e-02 lowCoverage 0.898118 lowCoverage chr6 7118750 7119750 23060 RREB1 ENSG00000124782 0.1547619 33 4 0.2660697 246 7 0.35235049 132 6 0.4852115 97 4 0.3850529 104 6 0.4792517 42 5 0.5804077 189 7 0.2282242 92 6 0.2459340 85 6 0.2338682 70 3 0.5416483 173 7 0.2126795 119 4 0.2445959 76 3 0.3333333 5 0 0.1843254 105 3 0.3094729 124 6 0.2099704 309 4 0.3166667 22 2 0.1950000 106 3 0.4117725 52 5 0.6700680 61 3 0.5000000 2 0 0.410173 56 5 0.471361 102 6 0.3114200 151 4 0.4464028 170 6 0.4523810 27 3 0.5000000 29 3 0.269841 46 3 0.2891613 172 7 0.1737213 214 6 0.5892857 43 5 0.8383754 135 6 0.8177452 104 6 0.87500000 29 2 0.6396396 112 4 0.756115 137 6 0.8789311 161 6 0.23849206 85 4 0.2757764 71 5 0.36805556 62 4 0.1333333 12 0 0.4117063 156 5 0.2653061 0.3925835 0.38405693 0.3754313 0.4364198 0.5202381 0.6004785 0.3582058 0.3632324 0.3729050 0.5727966 0.2697873 0.1968314 0.75195714 0.3255102 0.5777371 0.3609931 0.3904762 0.1971429 0.6947846 0.751701 0.4601267 0.227633 0.36394558 0.4567490 0.4724971 0.6825397 0.58630952 0.3435374 0.3344433 0.2592226 0.8869048 0.8804155 0.5650968 0.80745342 6.5079e-01 0.7726412 0.8952796 0.1896825 0.2452381 0.1388889 0.1055839 0.2477324 1 0.3351674 0.3233924 -0.0563855 6 0.3736621 0.401671 -0.0280088 0.9418014 0.0116174 weaklyHypometh 1 1.00000 insignificant 0.98604145 0.02224774 weaklyHypometh 1.00000 1.00000 insignificant -0.1051214 0.0458973 lowCoverage 1 lowCoverage 0.3348645 0.7669617 -0.45654737 6 0.3556139 0.7852416 -0.42962769 9.9999e-01 2.6430e-30 hypomethylated 1.0000e+00 1.3215e-27 hypomethylated 9.9999e-01 6.7895e-11 hypomethylated 1.0000e+00 3.3947e-08 hypomethylated -0.48243788 3.8612e-07 lowCoverage 6.4353e-05 lowCoverage 0.3351674 0.1554404 0.0787007 4 0.3736621 0.3678367 0.0058255 1.6872e-04 3.6923e-01 lowCoverage 1.1248e-02 1.0000e+00 lowCoverage 4.5816e-03 5.9342e-01 lowCoverage 2.7949e-01 1.0000e+00 lowCoverage 0.03305712 5.7736e-01 lowCoverage 1.00000000 lowCoverage 0.3230337 0.7669617 -0.42916712 6 0.401910 0.7852416 -0.3833319 1.0000e+00 2.7384e-18 hypomethylated 1.0000e+00 9.1280e-16 hypomethylated 1.0000e+00 2.5421e-08 hypomethylated 1.0000e+00 8.4738e-06 hypomethylated -0.37731646 6.3212e-06 lowCoverage 9.0303e-04 lowCoverage 0.3233924 0.1554404 0.10503029 4 0.401671 0.3678367 0.0338343 2.9898e-04 9.1195e-01 lowCoverage 1.8686e-02 1.0000e+00 lowCoverage 1.9791e-03 9.2106e-01 lowCoverage 1.3194e-01 1.0000e+00 lowCoverage 0.1381785 5.6454e-02 lowCoverage 1.0000000 lowCoverage 0.7669617 0.1532468 0.57300269 4 0.7852416 0.2775276 0.50771398 1.6184e-18 1.0000e+00 lowCoverage 1.6184e-15 1.0000e+00 lowCoverage 1.2368e-06 9.9988e-01 lowCoverage 0.00061842 1.0000000 lowCoverage 0.51549499 3.5538e-05 lowCoverage 0.017769 lowCoverage chr6 7180750 7181750 23064 RREB1 ENSG00000124782 0.9006554 228 6 0.7858855 120 6 0.77019929 114 6 0.8706964 185 4 0.7970238 51 4 0.8710861 192 6 0.7531798 105 6 0.7453591 89 6 0.8235138 100 6 0.8559680 95 6 0.8566804 148 6 0.8278265 73 4 0.8398433 115 6 NA 0 0 0.8980458 115 6 0.8730159 27 3 0.8250000 51 6 0.8748402 175 4 0.8357456 87 6 0.8391148 174 6 0.7820157 65 6 0.9140888 88 5 0.906956 170 6 0.853042 73 6 0.9022727 44 3 0.9171384 140 6 0.7543432 134 6 0.9047619 49 6 0.855987 102 6 0.8802735 132 6 0.8470239 135 6 0.8438273 245 6 0.3934766 109 6 0.4682179 96 6 0.39138322 355 5 0.7444444 43 5 0.562482 87 6 0.7261351 128 6 0.78421998 247 6 0.8441493 197 6 0.88346995 217 4 0.8103884 199 6 0.9012744 241 6 0.9013343 0.7995554 0.77226800 0.8790082 0.8327905 0.8831078 0.7693073 0.7915122 0.8396298 0.8826649 0.8640339 0.8440748 0.9004207 NA 0.9065815 0.8633111 0.8357513 0.8606723 0.8467412 0.8631487 0.770165 0.9132501 0.925790 0.87494860 0.8773366 0.9299231 0.7435223 0.94078460 0.8843570 0.9126448 0.8663584 0.8582353 0.3161513 0.4319920 0.39156945 6.9499e-01 0.5414642 0.6591963 0.8277144 0.8459227 0.9020088 0.8526223 0.8953922 3 0.8355615 0.8591140 -0.0246989 6 0.8244131 0.852009 -0.0275960 0.9576613 0.0715065 insignificant 1 1.00000 insignificant 0.95277323 0.03519929 weaklyHypometh 1.00000 1.00000 insignificant -0.0295996 0.1229728 insignificant 1 insignificant 0.8355615 0.5085575 0.33171904 6 0.8244131 0.5249374 0.29947571 2.5588e-19 9.9093e-01 hypermethylated 2.8431e-17 1.0000e+00 hypermethylated 4.6194e-05 9.9929e-01 hypermethylated 2.0997e-03 1.0000e+00 hypermethylated 0.28618801 6.3964e-03 weaklyHypermeth 1.8275e-01 insignificant 0.8355615 0.8782925 -0.0237682 6 0.8244131 0.8495480 -0.0251349 9.6408e-01 2.1410e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3066e-01 3.7168e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01082253 6.7095e-01 insignificant 1.00000000 insignificant 0.8591140 0.5085575 0.35610498 6 0.852009 0.5249374 0.3270718 3.3273e-14 9.9795e-01 hypermethylated 3.0248e-12 1.0000e+00 hypermethylated 9.8630e-05 9.9919e-01 hypermethylated 4.6966e-03 1.0000e+00 hypermethylated 0.31578765 3.8474e-03 weaklyHypermeth 1.3267e-01 insignificant 0.8591140 0.8782925 -0.00016110 6 0.852009 0.8495480 0.0024611 5.8951e-01 4.3364e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.8961e-01 8.0378e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0187771 4.9954e-01 insignificant 1.0000000 insignificant 0.5085575 0.8782925 -0.36333912 6 0.5249374 0.8495480 -0.32461064 9.9971e-01 1.1990e-06 hypomethylated 1.0000e+00 7.4937e-05 hypomethylated 9.9952e-01 2.2680e-03 weaklyHypometh 1.00000000 0.0809993 weaklyHypometh -0.29701054 4.6065e-03 weaklyHypometh 0.217275 insignificant chr6 10220950 10221950 23117 OFCC1 ENSG00000181355 0.1931797 402 16 0.3481406 181 11 0.38954942 158 11 0.1147184 233 14 0.2335447 143 10 0.2601748 285 18 0.1956627 266 13 0.2814852 168 11 0.2174137 144 11 0.2019828 192 11 0.1622685 295 11 0.2916195 212 11 0.2668947 196 11 0.0000000 3 0 0.1606879 301 11 0.1678893 243 10 0.0806497 246 11 0.0787646 370 15 0.1281485 168 11 0.3112801 313 17 0.2006410 77 7 0.1166667 97 10 0.098084 272 15 0.179766 146 10 0.4027778 37 1 0.8099633 200 10 0.2009657 146 12 0.3117216 63 7 0.247754 137 8 0.4477925 248 15 0.0865988 292 16 0.1246698 416 18 0.0540571 192 13 0.3180834 216 11 0.25000000 101 2 0.2782498 101 9 0.092308 56 6 0.3884877 252 13 0.12445125 666 15 0.1798020 481 16 0.14425564 433 14 0.1180181 411 14 0.0232136 379 14 0.0978194 0.3401960 0.45632156 0.1820753 0.1616030 0.2445355 0.1805933 0.3235377 0.1942148 0.1582197 0.1692226 0.1811793 0.2886264 NA 0.1615833 0.1937918 0.0743606 0.1458424 0.0915654 0.2933001 0.045175 0.0286585 0.063274 0.03530037 0.3801181 0.7958345 0.0850245 0.38298246 0.0699304 0.6700570 0.1206484 0.1438583 0.0219398 0.3751786 NA 2.2853e-01 0.0510526 0.3461135 0.1323159 0.1512635 0.0932769 0.0618979 0.0336674 3 0.1920779 0.2512917 -0.0606702 11 0.2543889 0.253325 0.0010638 0.9973669 0.1623250 insignificant 1 1.00000 insignificant 0.32650292 0.95046077 insignificant 1.00000 1.00000 insignificant -0.0647474 0.3246862 insignificant 1 insignificant 0.1917626 0.2145969 -0.01545473 10 0.1856760 0.2358743 -0.05019832 3.7850e-01 4.4075e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 4.4149e-01 8.1047e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02599489 6.6621e-01 insignificant 1.0000e+00 insignificant 0.1917626 0.0962838 0.0736318 12 0.1856760 0.1322128 0.0534632 2.0282e-04 9.9944e-01 weaklyHypermeth 1.2676e-02 1.0000e+00 weaklyHypermeth 4.0953e-05 9.9982e-01 weaklyHypermeth 4.0953e-03 1.0000e+00 weaklyHypermeth 0.08625461 2.8256e-02 weaklyHypermeth 0.85624285 insignificant 0.2505888 0.2145969 0.04778897 10 0.239990 0.2358743 0.0041161 3.5766e-01 7.0897e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.9444e-01 9.1348e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03875252 6.3521e-01 insignificant 1.0000e+00 insignificant 0.2505888 0.0962838 0.13281569 9 0.239990 0.1322128 0.1077777 1.9696e-02 9.9986e-01 weaklyHypermeth 5.3234e-01 1.0000e+00 insignificant 2.7070e-01 9.9000e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.1510020 3.5567e-02 weaklyHypermeth 1.0000000 insignificant 0.2145969 0.0962838 0.12404733 8 0.2358743 0.1322128 0.10366154 6.7398e-04 9.6327e-01 weaklyHypermeth 7.4887e-02 1.0000e+00 weaklyHypermeth 1.8689e-01 9.9568e-01 insignificant 1.00000000 1.0000000 insignificant 0.11224949 9.9787e-02 insignificant 1.000000 insignificant chr6 12150150 12151150 23195 HIVEP1 ENSG00000095951 0.8000000 145 7 0.7931223 135 7 0.77976190 42 4 0.7905753 142 7 0.5467687 34 4 0.7302512 56 4 0.8547619 64 5 0.6964286 100 7 0.7925170 48 7 0.8708333 48 7 0.6713390 148 7 0.6972789 26 3 0.6633333 63 7 0.8974359 56 4 0.8064626 64 4 0.7142857 28 3 1.0000000 3 0 0.6918549 207 8 0.7827381 52 7 0.7972028 61 4 0.6904762 13 0 0.9000000 21 3 0.844156 87 4 0.823696 46 6 0.7816667 87 3 0.5722752 77 7 0.7152907 49 6 0.7142857 19 0 0.716334 108 7 0.6853432 68 7 0.7332933 91 7 0.7337662 53 4 0.5667264 126 7 0.7482993 64 6 0.60763889 78 7 0.8333333 6 0 0.720423 56 4 0.5324463 48 4 0.84014778 101 3 0.9020408 87 7 0.83383353 130 7 0.7285714 108 6 0.6714286 101 4 0.7850549 0.7180813 0.76987179 0.7918198 0.6147436 0.8325085 0.8307692 0.7160256 0.7824176 0.8251282 0.7756082 0.7007326 0.8242735 0.79802761 0.8117582 0.6564103 0.8179335 0.7547282 0.7298077 0.6865878 0.725641 0.9384615 0.812238 0.83107448 0.7647973 0.6475345 0.7187729 0.72307692 0.7271171 0.6893906 0.7743116 0.7391608 0.7541998 0.7446886 0.67264957 7.4337e-01 0.6904868 0.4989065 0.8198674 0.8663736 0.8152769 0.7051282 0.7235897 0 0.7608410 0.7520891 0.0128868 7 0.7414224 0.719203 0.0222192 0.2354706 0.7902979 insignificant 1 1.00000 insignificant 0.52799733 0.93883522 insignificant 1.00000 1.00000 insignificant 0.0262990 0.4337174 lowCoverage 1 lowCoverage 0.7606838 0.7063492 0.05490592 7 0.7179153 0.5427397 0.17517560 6.0342e-03 9.9845e-01 weaklyHypermeth 7.3528e-02 1.0000e+00 weaklyHypermeth 7.9128e-03 9.9977e-01 weaklyHypermeth 1.5217e-01 1.0000e+00 insignificant 0.10070308 9.6195e-02 lowCoverage 1.0000e+00 lowCoverage 0.7641892 0.8197343 -0.0526830 4 0.7624961 0.8228039 -0.0603078 9.9216e-01 3.4820e-02 lowCoverage 1.0000e+00 9.1631e-01 lowCoverage 9.3513e-01 4.3545e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.02635685 5.9461e-01 insignificant 1.00000000 insignificant 0.7517434 0.7063492 0.03658052 7 0.693676 0.5427397 0.1509365 5.4242e-01 9.9817e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.5187e-01 9.9976e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.07440413 2.0581e-01 lowCoverage 1.0000e+00 lowCoverage 0.7528090 0.8197343 -0.06123856 4 0.732920 0.8228039 -0.0898841 9.9630e-01 1.5370e-02 lowCoverage 1.0000e+00 8.8134e-01 lowCoverage 9.5385e-01 3.0147e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0526558 3.1290e-01 lowCoverage 1.0000000 lowCoverage 0.7169811 0.8197343 -0.09523034 4 0.7100195 0.8228039 -0.11278433 9.9993e-01 7.1256e-03 lowCoverage 1.0000e+00 1.1876e-01 lowCoverage 9.9892e-01 2.9883e-02 lowCoverage 1.00000000 0.5152223 lowCoverage -0.12705994 7.6327e-02 lowCoverage 0.954082 lowCoverage chr6 12383450 12384450 23206 HIVEP1 ENSG00000095951 0.6983349 129 6 0.6698988 113 6 0.75595238 30 2 0.7469053 156 6 0.8161616 77 5 0.6847222 61 6 0.7126623 58 6 0.7265088 80 6 0.7840909 45 4 0.8037037 45 5 0.6773900 102 6 0.7991071 37 4 0.8456349 91 6 0.7408832 93 6 0.7573232 57 5 0.8125000 33 4 0.8777778 47 1 0.7677624 178 5 0.7928571 35 6 0.7380952 42 6 0.8107143 27 3 0.9333333 15 0 0.713564 69 6 0.627778 24 1 0.6370751 79 4 0.6319444 77 6 0.7694444 33 4 0.8750000 7 0 0.708011 112 6 0.4627184 62 6 0.7392857 48 4 0.7224401 88 6 0.6507937 93 6 0.6953976 76 6 0.50859788 67 6 1.0000000 3 0 0.626252 60 5 0.5690476 62 5 0.68862434 112 6 0.7210958 116 6 0.80045991 113 6 0.7488095 108 4 0.6527778 124 6 0.7114417 0.6790513 0.78489327 0.7630956 0.8274121 0.6570881 0.7312037 0.7117392 0.7998955 0.8109834 0.6800206 0.8026929 0.8464696 0.72509087 0.8214908 0.9195402 0.9034483 0.7560270 0.7619048 0.7339901 0.774185 0.9003182 0.661293 0.65249042 0.6994139 0.6458675 0.7196030 0.87674753 0.7298968 0.5001449 0.7118227 0.7355946 0.6284620 0.7102866 0.48887064 7.5472e-01 0.6213212 0.5561029 0.7370918 0.7343521 0.8167263 0.7581281 0.6796935 0 0.7627568 0.7234375 0.0449033 6 0.7579006 0.712572 0.0453284 0.0106419 0.9792836 weaklyHypermeth 1 1.00000 insignificant 0.02385401 0.94858788 weaklyHypermeth 1.00000 1.00000 insignificant 0.0411379 0.2984218 lowCoverage 1 lowCoverage 0.7627568 0.6426593 0.13588601 6 0.7579006 0.6189687 0.13893187 1.2150e-08 1.0000e+00 weaklyHypermeth 5.0625e-07 1.0000e+00 weaklyHypermeth 9.2298e-05 9.9930e-01 weaklyHypermeth 3.6919e-03 1.0000e+00 weaklyHypermeth 0.08539889 2.8188e-01 lowCoverage 1.0000e+00 lowCoverage 0.7627568 0.7626527 0.0239333 6 0.7579006 0.7199770 0.0379235 2.0662e-01 8.7384e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.0806e-01 9.3694e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03806014 2.2561e-01 insignificant 1.00000000 insignificant 0.7234375 0.6426593 0.09229255 6 0.712572 0.6189687 0.0936035 3.3044e-03 9.9776e-01 weaklyHypermeth 4.6541e-02 1.0000e+00 weaklyHypermeth 3.6188e-02 9.7752e-01 weaklyHypermeth 4.7616e-01 1.0000e+00 insignificant 0.04426103 5.9055e-01 lowCoverage 1.0000e+00 lowCoverage 0.7234375 0.7626527 -0.01445143 6 0.712572 0.7199770 -0.0074048 6.0253e-01 2.4082e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.7782e-01 2.5534e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0030777 9.4506e-01 lowCoverage 1.0000000 lowCoverage 0.6426593 0.7626527 -0.10408159 6 0.6189687 0.7199770 -0.10100832 9.3887e-01 5.9504e-05 weaklyHypometh 1.0000e+00 2.1251e-03 weaklyHypometh 8.4593e-01 6.3771e-03 weaklyHypometh 1.00000000 0.1822015 insignificant -0.04733875 5.4838e-01 lowCoverage 1.000000 lowCoverage chr6 13467850 13468850 23226 TBC1D7 ENSG00000145979 0.7142881 205 8 0.6407942 167 8 0.70502903 134 8 0.7633712 151 8 0.7641433 91 8 0.5545844 361 8 0.7104618 120 8 0.6878910 155 8 0.6815684 117 8 0.7168727 115 8 0.6967783 205 8 0.7042686 76 5 0.7425199 185 8 0.9500000 32 4 0.5655737 148 8 0.6522436 78 8 0.4168845 91 5 0.7591788 202 8 0.7152932 206 8 0.7035643 331 8 0.6127023 105 8 0.7167993 116 8 0.709566 127 8 0.776568 102 6 0.7336233 117 8 0.7761639 249 8 0.6325086 195 6 0.6084799 75 6 0.726157 109 8 0.7215323 211 8 0.6851731 287 8 0.6494511 414 8 0.4730958 156 8 0.6053228 91 6 0.56967769 200 8 0.5754986 53 4 0.626588 123 6 0.5168708 245 8 0.72040631 154 8 0.5679815 178 8 0.71779415 187 8 0.6124008 146 5 0.6901737 201 8 0.7197668 0.6555656 0.73012548 0.8187314 0.7588005 0.7593633 0.7199134 0.6908195 0.7497059 0.7376513 0.7341071 0.7043143 0.7463050 0.77832201 0.7615707 0.7224685 0.6127124 0.7219335 0.7741507 0.7797469 0.683723 0.7524053 0.683697 0.77479024 0.7560729 0.7598799 0.7076766 0.69028683 0.7681860 0.7369178 0.7727958 0.7298215 0.6341494 0.6186560 0.60758438 7.5667e-01 0.7047722 0.6154351 0.7778297 0.7595120 0.7704488 0.6906107 0.7617368 4 0.7192429 0.7161841 0.0084221 8 0.6689855 0.665143 0.0038422 0.4200889 0.5373998 insignificant 1 1.00000 insignificant 0.43244559 0.69091278 insignificant 1.00000 1.00000 insignificant -0.0034616 0.9041937 insignificant 1 insignificant 0.7192429 0.6140553 0.10913684 8 0.6689855 0.4986222 0.17036331 1.8699e-08 1.0000e+00 weaklyHypermeth 7.4797e-07 1.0000e+00 weaklyHypermeth 4.2174e-04 9.9842e-01 weaklyHypermeth 1.2780e-02 1.0000e+00 weaklyHypermeth 0.13108986 1.0605e-03 weaklyHypermeth 5.0498e-02 weaklyHypermeth 0.7192429 0.6824480 -0.0186820 8 0.6689855 0.6200234 0.0489621 7.5233e-01 3.9596e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.9384e-01 4.1177e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03051415 4.4470e-01 insignificant 1.00000000 insignificant 0.7161841 0.6140553 0.09967065 8 0.665143 0.4986222 0.1665211 1.7712e-06 9.9972e-01 weaklyHypermeth 7.7007e-05 1.0000e+00 weaklyHypermeth 2.4469e-03 9.9942e-01 weaklyHypermeth 5.9680e-02 1.0000e+00 weaklyHypermeth 0.13455148 7.8814e-04 weaklyHypermeth 4.9259e-02 weaklyHypermeth 0.7161841 0.6824480 -0.02504152 8 0.665143 0.6200234 0.0451199 8.8930e-02 2.7681e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.7590e-01 4.0078e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0339758 3.6402e-01 insignificant 1.0000000 insignificant 0.6140553 0.6824480 -0.11811480 8 0.4986222 0.6200234 -0.12140119 9.9951e-01 2.6093e-04 weaklyHypometh 1.0000e+00 7.9069e-03 weaklyHypometh 9.9571e-01 4.5288e-03 weaklyHypometh 1.00000000 0.1332011 insignificant -0.10057570 3.0991e-02 weaklyHypometh 0.584732 insignificant chr6 13981450 13982450 23241 CCDC90A ENSG00000050393 0.2289648 527 18 0.1579851 1030 21 0.28824523 732 21 0.1704814 340 9 0.2276626 592 20 0.2624914 883 20 0.2686334 985 21 0.1649084 572 17 0.2335793 785 21 0.2009708 460 17 0.2943288 859 21 0.2421437 623 19 0.3037328 540 17 0.2710794 188 8 0.2773492 1009 21 0.1836531 711 17 0.2334888 616 14 0.2254207 438 17 0.3473000 643 19 0.2546958 790 21 0.2049206 315 20 0.2463998 144 7 0.165577 584 21 0.193993 482 20 0.2776261 105 7 0.2775683 1129 21 0.2215561 515 20 0.1882228 262 15 0.203034 602 20 0.2133014 1247 21 0.2540861 1167 21 0.2976344 851 21 0.1638857 820 21 0.2229875 610 21 0.14127406 780 11 0.2203209 85 7 0.277061 556 20 0.2360627 1065 21 0.23017633 652 17 0.2591927 679 21 0.21673504 493 12 0.2939779 487 14 0.2065796 376 15 0.3775826 0.2642863 0.36714281 0.3000182 0.2950687 0.3921930 0.3811039 0.3280428 0.2885499 0.2824666 0.3628752 0.3398883 0.4413126 0.33194473 0.3601313 0.2994886 0.3865844 0.3304147 0.4416214 0.4134395 0.293095 0.3366564 0.264831 0.27712095 0.3213690 0.3856608 0.2748522 0.26534868 0.3412427 0.3569478 0.4089898 0.4181409 0.2906029 0.3296291 0.25906981 3.4229e-01 0.4146993 0.3271961 0.3847379 0.3344918 0.2690679 0.3654533 0.3181107 8 0.2594428 0.2759692 0.0152696 21 0.2684050 0.224140 0.0442651 0.0191865 0.6564927 weaklyHypermeth 1 1.00000 insignificant 0.02798871 0.95903356 weaklyHypermeth 1.00000 1.00000 insignificant 0.0131957 0.4262635 insignificant 1 insignificant 0.2591090 0.1935649 0.05668514 21 0.2351506 0.2136469 0.02150374 1.4731e-10 6.3632e-03 weaklyHypermeth 7.7531e-09 3.9139e-01 weaklyHypermeth 9.1805e-07 1.0088e-01 weaklyHypermeth 6.5575e-05 1.0000e+00 weaklyHypermeth 0.03159046 2.0760e-01 insignificant 1.0000e+00 insignificant 0.2591090 0.4331969 0.0076681 18 0.2351506 0.2490828 -0.0139322 4.4276e-01 5.0181e-04 inconclusive 1.0000e+00 6.7851e-02 inconclusive 3.7071e-01 4.3866e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00052341 9.7908e-01 insignificant 1.00000000 insignificant 0.2759227 0.1935649 0.04728446 21 0.219177 0.2136469 0.0055296 1.9630e-06 9.8466e-03 weaklyHypermeth 8.1791e-05 1.0000e+00 weaklyHypermeth 1.8286e-03 1.4465e-01 weaklyHypermeth 5.0685e-02 1.0000e+00 weaklyHypermeth 0.01839472 4.5493e-01 insignificant 1.0000e+00 insignificant 0.2759227 0.4331969 -0.01160353 18 0.219177 0.2490828 -0.0299063 8.5446e-01 1.2272e-02 weaklyHypometh 1.0000e+00 8.3677e-01 insignificant 8.0204e-01 3.2661e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0126723 5.3949e-01 insignificant 1.0000000 insignificant 0.1935649 0.4331969 -0.07316212 18 0.2136469 0.2490828 -0.03543593 5.1438e-01 1.0985e-09 weaklyHypometh 1.0000e+00 1.5693e-07 weaklyHypometh 5.9420e-01 4.1742e-03 weaklyHypometh 1.00000000 0.1332011 insignificant -0.03106705 2.5834e-01 insignificant 1.000000 insignificant chr6 14797650 14798650 23266 ENSG00000206960 0.6690476 117 5 0.5607688 90 5 0.48904762 83 5 0.6884454 78 5 0.6697059 68 5 0.6563041 295 5 0.6574074 97 5 0.6941339 106 5 0.6830759 100 5 0.6718178 84 5 0.6934387 108 5 0.7090909 55 5 0.7207793 112 5 NA 0 0 0.6313033 94 5 0.7096970 49 5 0.6222222 76 5 0.6704487 97 5 0.6448066 136 5 0.7303922 271 5 0.6856566 53 5 0.5650824 70 5 0.621154 74 5 0.686111 42 5 0.7500000 28 2 0.6103917 176 5 0.6251082 55 5 0.6490909 55 5 0.486364 40 3 0.6710141 137 5 0.5933918 156 5 0.6753463 284 5 0.4538712 102 5 0.4705882 87 5 0.52740738 92 5 0.5683601 74 5 0.645317 50 5 0.6122822 169 5 0.72224728 154 5 0.6863156 146 5 0.68307692 113 5 0.6337662 123 5 0.7074074 134 5 0.6729958 0.5619110 0.49268636 0.6872540 0.6683917 0.6562406 0.6571535 0.6932964 0.6796979 0.6679898 0.6954762 0.7057921 0.7154181 NA 0.6313431 0.7044623 0.6174402 0.6752272 0.6442896 0.7313229 0.683135 0.5668672 0.619888 0.68747070 0.7542194 0.6086358 0.6225181 0.64802455 0.4907940 0.6692125 0.5947825 0.6753110 0.4575700 0.4724084 0.52934197 5.7149e-01 0.6415679 0.6142904 0.7214435 0.6890772 0.6861571 0.6313223 0.7076106 5 0.6710775 0.6384615 0.0337635 5 0.6698837 0.636183 0.0337008 0.1167218 0.9839146 insignificant 1 1.00000 insignificant 0.19771528 0.95728267 insignificant 1.00000 1.00000 insignificant 0.0267881 0.2707709 lowCoverage 1 lowCoverage 0.6710775 0.5365854 0.13422555 5 0.6698837 0.5419599 0.12792383 9.0557e-07 1.0000e+00 weaklyHypermeth 2.4475e-05 1.0000e+00 weaklyHypermeth 6.6981e-05 9.9999e-01 weaklyHypermeth 2.7909e-03 1.0000e+00 weaklyHypermeth 0.11537627 1.1714e-02 lowCoverage 3.0035e-01 lowCoverage 0.6710775 0.6985075 -0.0186454 5 0.6698837 0.6881450 -0.0182613 7.2980e-01 7.9081e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 6.1154e-01 2.6755e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.02488199 2.3822e-01 lowCoverage 1.00000000 lowCoverage 0.6384615 0.5365854 0.10060351 5 0.636183 0.5419599 0.0942230 5.1887e-05 9.9994e-01 weaklyHypermeth 1.4413e-03 1.0000e+00 weaklyHypermeth 1.6649e-03 9.9992e-01 weaklyHypermeth 4.7570e-02 1.0000e+00 weaklyHypermeth 0.08858812 3.9644e-02 lowCoverage 7.6239e-01 lowCoverage 0.6384615 0.6985075 -0.04935677 5 0.636183 0.6881450 -0.0519622 9.7040e-01 7.4957e-03 weaklyHypometh 1.0000e+00 6.2464e-01 insignificant 9.2309e-01 7.5884e-03 weaklyHypometh 1.0000e+00 7.5884e-01 insignificant -0.0516701 5.5274e-02 lowCoverage 1.0000000 lowCoverage 0.5365854 0.6985075 -0.14924618 5 0.5419599 0.6881450 -0.14618517 1.0000e+00 1.1765e-06 weaklyHypometh 1.0000e+00 7.4937e-05 weaklyHypometh 1.0000e+00 1.4266e-04 weaklyHypometh 1.00000000 0.0117579 weaklyHypometh -0.14025826 4.7443e-03 weaklyHypometh 0.217275 insignificant chr6 15125550 15126550 23293 ENSG00000206960 0.5463817 728 18 0.4939164 552 18 0.47686405 411 16 0.5843661 604 17 0.5182689 229 18 0.5577664 761 18 0.5359194 347 18 0.5251271 359 17 0.5053154 375 16 0.4986829 365 18 0.5618430 599 18 0.5924523 237 16 0.4925480 446 18 0.8485119 78 6 0.4899398 442 18 0.6172326 180 11 0.3500045 522 14 0.5769133 695 17 0.4157777 396 18 0.5641949 756 18 0.5074716 167 14 0.6283910 329 16 0.583799 484 18 0.603197 193 14 0.5596905 185 13 0.5325139 718 18 0.4888287 248 15 0.5218452 147 16 0.490630 408 17 0.5147968 788 18 0.4984316 661 18 0.5330954 948 18 0.4097822 449 19 0.4695776 264 18 0.42321860 293 14 0.4214749 147 14 0.443718 297 18 0.4127122 707 18 0.47759648 668 18 0.5465466 653 18 0.46533922 676 18 0.5586336 605 18 0.5088814 663 18 0.6365893 0.5569663 0.53304005 0.6192522 0.5487632 0.5989031 0.5813996 0.5836534 0.5526601 0.5549660 0.6161345 0.5972215 0.5551951 0.60225956 0.5218848 0.6209720 0.4774974 0.6089471 0.4632158 0.5789975 0.607644 0.5910432 0.615803 0.63180961 0.5688335 0.5741590 0.5688224 0.65382618 0.5529515 0.5671043 0.4977317 0.5604461 0.4691878 0.4990237 0.37630963 4.8849e-01 0.4951495 0.4706725 0.5124806 0.5747433 0.5041018 0.5785860 0.5502729 12 0.5487778 0.5368121 0.0084020 18 0.5068510 0.504217 0.0026339 0.6079564 0.5635976 insignificant 1 1.00000 insignificant 0.93871826 0.39256876 insignificant 1.00000 1.00000 insignificant -0.0009562 0.9699572 insignificant 1 insignificant 0.5488490 0.4499072 0.11208811 18 0.5159836 0.4077885 0.10819501 7.2319e-13 9.9997e-01 weaklyHypermeth 5.1656e-11 1.0000e+00 weaklyHypermeth 2.0490e-07 9.9962e-01 weaklyHypermeth 1.7075e-05 1.0000e+00 weaklyHypermeth 0.10752080 1.1755e-04 weaklyHypermeth 8.3963e-03 weaklyHypermeth 0.5488490 0.5013783 0.0426666 18 0.5159836 0.4815774 0.0344062 6.1430e-03 2.8161e-01 weaklyHypermeth 2.2752e-01 1.0000e+00 insignificant 3.2153e-02 3.1658e-01 weaklyHypermeth 9.7433e-01 1.0000e+00 insignificant 0.02620185 3.6685e-01 insignificant 1.00000000 insignificant 0.5369000 0.4501623 0.10675349 18 0.510884 0.4373991 0.0734847 4.6442e-10 9.9991e-01 weaklyHypermeth 2.9026e-08 1.0000e+00 weaklyHypermeth 7.9679e-07 9.9990e-01 weaklyHypermeth 8.8532e-05 1.0000e+00 weaklyHypermeth 0.10847701 4.9233e-06 weaklyHypermeth 8.2055e-04 weaklyHypermeth 0.5371320 0.5013783 0.03693905 18 0.520229 0.4815774 0.0386512 1.3670e-02 4.2073e-01 weaklyHypermeth 4.4095e-01 1.0000e+00 insignificant 1.0627e-01 6.4017e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0271581 2.6244e-01 insignificant 1.0000000 insignificant 0.4499072 0.5013783 -0.07448262 18 0.4077885 0.4815774 -0.07378885 9.9966e-01 1.1755e-07 weaklyHypometh 1.0000e+00 1.0687e-05 weaklyHypometh 9.9999e-01 2.1480e-04 weaklyHypometh 1.00000000 0.0135353 weaklyHypometh -0.08131895 7.5209e-03 weaklyHypometh 0.278552 insignificant chr6 15141750 15142750 23294 ENSG00000206960 0.7924784 228 6 0.9117406 295 6 0.87100937 88 6 0.8629080 154 5 0.8337701 108 6 0.9035510 375 6 0.8707516 82 5 0.8747990 128 6 0.9181548 104 6 0.9214286 38 2 0.7952048 298 6 0.7896825 27 3 0.9120147 133 6 0.8174861 104 6 0.9135802 154 6 0.6388889 28 3 1.0000000 5 1 0.9193263 189 5 0.9323709 226 6 0.9034183 249 5 0.7214286 29 3 0.9474206 60 4 0.868417 98 6 0.954540 72 5 0.9583333 54 4 0.8582701 301 6 0.9101010 65 5 0.6904762 67 4 0.786084 154 6 0.9655611 258 5 0.8846320 278 6 0.9392077 336 6 0.8766553 120 6 0.7042857 54 5 0.67776915 328 3 0.9333333 17 1 0.935244 109 5 0.8458526 281 6 0.90571737 188 6 0.8599625 159 6 0.80556608 144 6 0.8406311 118 6 0.9191939 148 5 0.9258838 0.9169301 0.80837043 0.8735085 0.8350083 0.8962103 0.8322493 0.8541689 0.8879210 0.9199381 0.9428776 0.7158343 0.9404456 0.94095133 0.9120052 0.5257453 NA 0.9134304 0.9196597 0.8883724 0.972358 0.9147309 0.877149 0.95535993 0.9349593 0.8681526 0.9114560 0.91173055 0.8969454 0.9555267 0.9135234 0.9201917 0.9035577 0.6809524 0.78911175 9.2954e-01 0.9285571 0.8259101 0.9027401 0.8610485 0.8458575 0.8467331 0.9191225 2 0.8964487 0.9023151 -0.0060291 6 0.7516213 0.799066 -0.0474443 0.7506467 0.5596683 insignificant 1 1.00000 insignificant 0.92126376 0.07929827 insignificant 1.00000 1.00000 insignificant -0.0045777 0.8883390 insignificant 1 insignificant 0.8967463 0.7953795 0.09672012 6 0.8589957 0.8365819 0.02241383 1.5776e-04 6.6750e-01 weaklyHypermeth 2.7677e-03 1.0000e+00 weaklyHypermeth 1.7232e-01 3.0051e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.04027145 4.4020e-01 lowCoverage 1.0000e+00 lowCoverage 0.8972398 0.8797886 0.0328842 6 0.9021617 0.8644863 0.0376754 1.5181e-02 5.6666e-01 weaklyHypermeth 4.4650e-01 1.0000e+00 insignificant 6.8489e-02 7.1999e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00291403 9.1622e-01 insignificant 1.00000000 insignificant 0.9027699 0.7953795 0.10933919 6 0.841789 0.8365819 0.0052073 1.7595e-03 6.4995e-01 weaklyHypermeth 2.7492e-02 1.0000e+00 weaklyHypermeth 6.5274e-02 7.6244e-01 insignificant 7.5900e-01 1.0000e+00 insignificant 0.04484915 4.2325e-01 lowCoverage 1.0000e+00 lowCoverage 0.9045997 0.8797886 0.04168450 6 0.898754 0.8644863 0.0342678 4.1508e-02 8.3529e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 1.5505e-02 9.9787e-01 weaklyHypermeth 5.5388e-01 1.0000e+00 insignificant 0.0074917 8.3042e-01 insignificant 1.0000000 insignificant 0.7951542 0.8797886 -0.06814609 6 0.8093456 0.8644863 -0.05514072 6.9588e-01 1.3099e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.6728e-01 5.5740e-01 insignificant 1.00000000 1.0000000 insignificant -0.03735742 4.8311e-01 lowCoverage 1.000000 lowCoverage chr6 15508550 15509550 23328 JARID2 ENSG00000008083 0.4716652 248 4 0.3788206 360 6 0.44013744 186 7 0.2182820 166 4 0.2531467 144 7 0.4198678 244 6 0.5042895 282 7 0.4655808 234 5 0.4142331 168 5 0.3857831 159 4 0.6030476 286 7 0.4516046 99 4 0.1092506 150 4 0.4722222 16 2 0.2801560 163 4 0.3452021 86 4 0.2722321 114 3 0.2970021 155 4 0.3509816 191 4 0.5899677 219 6 0.4297106 85 5 0.1800357 65 3 0.384220 247 6 0.384615 91 6 0.5937500 57 3 0.5177198 337 6 0.3036453 227 5 0.3166267 50 3 0.253996 222 4 0.3861611 411 6 0.4757613 314 7 0.4650529 258 6 0.2183261 308 7 0.2676967 180 5 0.05000000 293 6 0.3152381 36 3 0.248223 160 6 0.3647234 333 6 0.04440135 315 6 0.1261271 236 5 0.03642584 242 6 0.0531228 220 4 0.1484495 308 6 0.5408921 0.3212589 0.38648451 0.3621736 0.2712597 0.5133100 0.5072729 0.4181365 0.3138784 0.4924085 0.4395973 0.4630115 0.1659958 0.40677154 0.3865648 0.4242027 0.2689408 0.3683782 0.3796621 0.5449976 0.487393 0.1761372 0.334447 0.43049120 0.4779418 0.6066707 0.3870667 0.46756775 0.3145118 0.3517834 0.5698809 0.5178891 0.3228769 0.4824313 0.04216867 2.0658e-01 0.5163202 0.2736917 0.0673085 0.1026880 0.0310256 0.0561026 0.1208095 4 0.4088307 0.4331641 -0.0273196 5 0.4191173 0.386255 0.0328622 0.4664252 0.5245294 insignificant 1 1.00000 insignificant 0.76691887 0.23373645 insignificant 1.00000 1.00000 insignificant -0.0047676 0.9134401 lowCoverage 1 lowCoverage 0.4088307 0.2870229 0.10685485 5 0.4191173 0.1884047 0.23071256 6.1387e-09 9.8111e-01 weaklyHypermeth 2.7903e-07 1.0000e+00 weaklyHypermeth 1.8990e-04 9.8898e-01 weaklyHypermeth 6.9201e-03 1.0000e+00 weaklyHypermeth 0.14213909 2.2622e-02 lowCoverage 4.8132e-01 lowCoverage 0.4088307 0.0809992 0.3259664 5 0.4191173 0.0891362 0.3299811 1.7435e-17 1.0000e+00 hypermethylated 1.7435e-14 1.0000e+00 hypermethylated 1.0713e-11 1.0000e+00 hypermethylated 1.0713e-08 1.0000e+00 hypermethylated 0.30446832 2.1421e-07 lowCoverage 0.00021421 lowCoverage 0.4331641 0.2870229 0.13703915 6 0.386255 0.1884047 0.1978503 3.6134e-08 9.9977e-01 weaklyHypermeth 1.8067e-06 1.0000e+00 weaklyHypermeth 4.9154e-05 9.9952e-01 weaklyHypermeth 2.6086e-03 1.0000e+00 weaklyHypermeth 0.14690671 2.2904e-02 weaklyHypermeth 5.3266e-01 insignificant 0.4331641 0.0809992 0.35166767 6 0.386255 0.0891362 0.2971189 4.4216e-14 1.0000e+00 hypermethylated 4.4216e-11 1.0000e+00 hypermethylated 4.4211e-09 1.0000e+00 hypermethylated 4.4211e-06 1.0000e+00 hypermethylated 0.3092359 1.7745e-06 hypermethylated 0.0017745 hypermethylated 0.2870229 0.0809992 0.21952781 6 0.1884047 0.0891362 0.09926855 7.7670e-04 9.2379e-01 hypermethylated 7.7670e-02 1.0000e+00 hypermethylated 3.1287e-02 9.9013e-01 weaklyHypermeth 1.00000000 1.0000000 insignificant 0.16232923 1.2855e-02 weaklyHypermeth 0.367297 insignificant chr6 15617350 15618350 23334 JARID2 ENSG00000008083 0.8293308 142 5 0.8799851 172 5 0.83176451 160 5 0.9500000 23 2 0.9295957 92 5 0.9236213 190 5 0.7927957 177 5 0.8799603 116 5 0.9050292 113 5 0.9288235 100 5 0.8663144 187 5 0.8206741 114 5 0.9661745 181 5 NA 0 0 0.9156471 143 5 0.6785185 67 5 0.9625000 65 5 0.7998512 36 4 0.9075195 171 5 0.9178248 180 5 0.9924812 83 4 0.9857143 33 3 0.968566 121 5 0.929620 86 5 0.8888889 25 1 0.9764236 193 5 0.9012824 102 5 0.9236111 63 4 0.917857 103 5 0.9231838 168 5 0.9571778 167 5 0.8409385 268 5 0.8534957 161 5 0.7977900 180 5 1.00000000 161 5 0.9451389 61 5 0.878458 101 5 0.9519801 154 5 0.88105429 144 5 0.9070858 160 5 0.91588319 72 5 0.8679868 114 5 0.9277778 59 4 0.9376953 0.8822969 0.83407603 0.9457096 0.9487875 0.9303573 0.8714797 0.9032690 0.9156757 0.8902862 0.8604342 0.8230941 0.9566505 NA 0.8887423 0.7011011 0.9229730 0.8291685 0.8987400 0.9464201 0.991181 0.9706564 0.969880 0.92396792 1.0000000 0.9587891 0.9166203 0.95105105 0.9583012 0.9474684 0.9503312 0.9261455 0.9018077 0.9369662 1.00000000 9.6070e-01 0.9470767 0.9301574 0.9606364 0.9185906 0.9135713 0.9038592 0.9216216 4 0.8999588 0.9475549 -0.0491243 5 0.7198853 0.925194 -0.2053086 0.9710994 0.0057432 weaklyHypometh 1 0.95721 insignificant 0.99353956 0.00035300 weaklyHypometh 1.00000 0.35300 insignificant -0.0556052 0.0127044 lowCoverage 1 lowCoverage 0.9007005 0.9315403 -0.02745562 5 0.9255668 0.8356641 0.08990268 3.5061e-01 6.5682e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 8.4966e-01 2.5842e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.02627031 4.6868e-01 lowCoverage 1.0000e+00 lowCoverage 0.9006595 0.9143898 -0.0151894 5 0.9131612 0.8967282 0.0164330 4.4943e-01 2.7973e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.4644e-01 3.9760e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02175071 2.8704e-01 lowCoverage 1.00000000 lowCoverage 0.9472559 0.9315403 0.02072866 5 0.903821 0.8356641 0.0681566 1.5662e-01 9.0924e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.0762e-01 9.3412e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02933489 4.0413e-01 lowCoverage 1.0000e+00 lowCoverage 0.9483871 0.9143898 0.03077768 5 0.929458 0.8967282 0.0327293 2.8699e-02 9.8953e-01 weaklyHypermeth 7.3588e-01 1.0000e+00 insignificant 7.5310e-03 9.9441e-01 weaklyHypermeth 3.4232e-01 1.0000e+00 insignificant 0.0338545 6.7310e-02 lowCoverage 1.0000000 lowCoverage 0.9325980 0.9143898 0.00819076 5 0.8916081 0.8967282 -0.00512014 3.7511e-01 8.4518e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.2188e-01 9.8281e-01 insignificant 1.00000000 1.0000000 insignificant 0.00451960 8.9324e-01 lowCoverage 1.000000 lowCoverage chr6 15721550 15722550 23339 JARID2 ENSG00000008083 0.8517269 172 5 0.8774725 60 3 0.86000000 53 5 0.8574713 120 5 0.7480769 51 5 0.8272882 131 5 0.7983333 52 5 0.8066667 46 4 0.7742857 34 4 0.7580769 44 4 0.8553339 115 5 0.7128571 28 4 0.6908020 67 5 NA 0 0 0.8513462 65 5 0.7309524 27 3 0.7544444 33 3 0.9371032 81 5 0.8579365 67 5 0.7741669 111 5 0.7366667 20 2 0.8177778 37 5 0.823203 87 5 0.906818 30 3 0.9047619 39 5 0.7870635 77 5 0.8866667 30 2 0.8800000 21 2 0.825032 52 5 0.7982366 109 5 0.8571352 104 5 0.8318073 179 5 0.7185805 49 3 0.7364103 57 5 0.74775328 77 5 0.8471212 54 5 0.926984 22 2 0.6337530 71 3 0.87641326 123 5 0.8395765 147 5 0.88823810 119 5 0.8266667 185 5 0.8816438 170 5 0.8566239 0.8573307 0.82621083 0.8652323 0.7375082 0.7936793 0.7897843 0.8501425 0.7393162 0.7620809 0.8567540 0.7088319 0.7237271 NA 0.8723702 0.7322955 0.7445394 0.9392806 0.8660901 0.7714927 0.744444 0.7972460 0.835479 0.86062549 0.8974359 0.7933795 0.8304843 0.82051282 0.8420621 0.8348670 0.8664399 0.8246900 0.7442222 0.7268902 0.74100626 8.2190e-01 0.8907882 0.6573228 0.8908049 0.8405975 0.9033333 0.8246914 0.8616641 2 0.8216654 0.8292994 -0.0118006 5 0.8178892 0.828350 -0.0104605 0.8484112 0.3629997 insignificant 1 1.00000 insignificant 0.93081831 0.03717130 weaklyHypometh 1.00000 1.00000 insignificant -0.0313865 0.1461991 lowCoverage 1 lowCoverage 0.8216654 0.7545455 0.06316599 5 0.8178892 0.7590241 0.05886506 1.7998e-02 9.9834e-01 weaklyHypermeth 1.8945e-01 1.0000e+00 insignificant 1.6312e-01 9.7685e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03811054 4.2549e-01 lowCoverage 1.0000e+00 lowCoverage 0.8216654 0.8655914 -0.0444866 5 0.8178892 0.8605483 -0.0426591 9.9211e-01 1.6359e-02 weaklyHypometh 1.0000e+00 6.2920e-01 insignificant 9.9767e-01 9.6992e-03 weaklyHypometh 1.0000e+00 8.0827e-01 insignificant -0.05596340 1.0247e-02 lowCoverage 0.44552374 lowCoverage 0.8292994 0.7545455 0.07595128 5 0.828350 0.7590241 0.0693256 1.4257e-03 9.9708e-01 weaklyHypermeth 2.3372e-02 1.0000e+00 weaklyHypermeth 2.5545e-02 9.9398e-01 weaklyHypermeth 3.8127e-01 1.0000e+00 insignificant 0.06949703 1.6907e-01 lowCoverage 1.0000e+00 lowCoverage 0.8292994 0.8655914 -0.03238463 5 0.828350 0.8605483 -0.0321986 9.7807e-01 9.2066e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.0076e-01 2.8969e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0245769 2.2337e-01 lowCoverage 1.0000000 lowCoverage 0.7545455 0.8655914 -0.10868050 5 0.7590241 0.8605483 -0.10152416 9.9964e-01 5.0285e-04 weaklyHypometh 1.0000e+00 1.4367e-02 weaklyHypometh 9.9678e-01 4.0240e-02 weaklyHypometh 1.00000000 0.6072642 insignificant -0.09407393 7.7409e-02 lowCoverage 0.955662 lowCoverage chr6 16385150 16386150 23373 GMPR ENSG00000137198 0.3697378 128 5 0.2466959 207 7 0.28995189 248 8 0.1916667 86 5 0.3409382 98 6 0.3708625 135 6 0.2827503 180 6 0.3131945 148 6 0.3174771 150 6 0.3098625 168 6 0.3282468 99 6 0.3606802 124 6 0.1957071 112 6 NA 0 0 0.2478992 117 5 0.3034188 87 6 0.1052723 187 6 0.2194444 86 5 0.2625000 88 6 0.2972201 180 6 0.3232804 46 5 0.1953598 81 5 0.408748 131 6 0.377778 53 5 0.0750000 46 4 0.2742691 271 8 0.2562958 64 6 0.4055556 43 4 0.315734 108 6 0.2752155 280 8 0.4026575 239 8 0.6331542 179 7 0.3484182 320 8 0.3681994 120 6 0.48379246 198 5 0.0833333 42 4 0.372650 47 5 0.2410727 291 8 0.12824221 179 5 0.3538043 109 7 0.15384615 63 4 0.3282344 95 4 0.2618908 165 4 0.2642887 0.1252209 0.20754030 0.1251853 0.2474934 0.1536848 0.1281503 0.2247782 0.1970600 0.1582443 0.1587942 0.3063526 0.0932931 NA 0.0941542 0.1729424 0.0719155 0.1253497 0.1293124 0.1901407 0.086713 0.0894906 0.227305 0.12703963 0.1227407 0.1303579 0.1039826 0.27202797 0.2422955 0.0960450 0.2304343 0.3839053 0.1412418 0.3047842 0.05767571 3.4965e-03 0.2402188 0.0492132 0.1110384 0.1619084 0.0559441 0.0696937 0.2225643 3 0.2948571 0.3140818 -0.0485827 7 0.2882963 0.481803 -0.1935072 0.9751409 0.0503454 insignificant 1 1.00000 insignificant 0.87550650 0.17024060 insignificant 1.00000 1.00000 insignificant -0.0468228 0.2890324 insignificant 1 insignificant 0.2949256 0.3084479 0.05525735 7 0.2978704 0.3503909 -0.05252058 1.6947e-02 6.2072e-03 weaklyHypermeth 1.8029e-01 3.9139e-01 insignificant 7.1105e-02 2.9892e-01 insignificant 8.4432e-01 1.0000e+00 insignificant -0.03447974 5.7717e-01 insignificant 1.0000e+00 insignificant 0.2945205 0.1538462 0.0305295 5 0.2620875 0.2188978 0.0431897 6.0664e-03 3.3680e-01 weaklyHypermeth 2.2752e-01 1.0000e+00 insignificant 1.6338e-01 8.2097e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03656095 4.7995e-01 lowCoverage 1.00000000 lowCoverage 0.3131904 0.3084479 0.06530577 8 0.352254 0.3503909 0.0018634 1.3860e-02 8.2996e-02 weaklyHypermeth 1.6116e-01 1.0000e+00 insignificant 1.3141e-01 6.1221e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01234306 8.6107e-01 insignificant 1.0000e+00 insignificant 0.3140818 0.1548600 0.06091631 5 0.481803 0.2407876 0.2410159 4.8050e-04 9.3628e-01 weaklyHypermeth 2.8264e-02 1.0000e+00 weaklyHypermeth 1.8595e-01 9.7674e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0833837 1.9474e-01 lowCoverage 1.0000000 lowCoverage 0.3084479 0.1563025 -0.00927466 5 0.3503909 0.2801512 0.07023976 2.6396e-01 6.5412e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.8202e-01 5.5396e-01 insignificant 1.00000000 1.0000000 insignificant 0.07104069 3.5111e-01 lowCoverage 1.000000 lowCoverage chr6 17742850 17743850 23390 ENSG00000206881 0.6613534 102 5 0.6497287 67 5 0.70476190 30 3 0.6521739 84 3 0.5000000 14 1 0.5907527 145 5 0.7533333 29 3 0.7000000 46 3 0.6866667 21 1 0.4166667 18 1 0.6259259 81 4 0.6111111 14 1 0.6700000 35 2 1.0000000 9 1 0.6577778 53 3 0.6666667 8 0 0.1666667 6 0 0.7267521 71 4 0.5989177 72 3 0.6045986 96 5 0.3600000 18 3 1.0000000 17 1 0.599634 76 5 0.477564 42 3 1.0000000 5 1 0.6640909 97 5 0.5512821 33 1 0.7666667 35 1 0.523333 51 3 0.5595924 101 3 0.6521212 98 5 0.5618029 143 5 0.5752315 43 3 0.7000000 29 3 0.66593407 75 5 0.5833333 8 0 0.461395 55 3 0.6117521 73 3 0.67354497 52 5 0.6289683 87 5 0.64161765 68 5 0.5853175 47 5 0.6135484 85 5 0.7580952 0.7041860 0.71428571 0.8000000 0.7000000 0.6850946 0.7533333 0.8000000 0.6600000 0.6500000 0.7111111 0.7000000 0.7700000 0.75541353 0.7177778 0.8000000 0.6381106 0.8233333 0.6785714 0.7178363 0.760000 0.7424394 0.766667 0.60961538 0.7424394 0.7450000 0.7205128 0.86666667 0.5900000 0.6547170 0.7033333 0.6590018 0.6305556 0.8333333 0.75384615 6.4328e-01 0.6241860 0.7333333 0.7920635 0.6361111 0.7600000 0.7059524 0.7006452 1 0.7722278 0.7709497 0.0120293 3 0.6277705 0.608236 0.0195345 0.4150725 0.7931561 lowCoverage 1 1.00000 lowCoverage 0.26033077 0.92662895 lowCoverage 1.00000 1.00000 lowCoverage -0.0108146 0.8717104 lowCoverage 1 lowCoverage 0.7722278 0.7314488 0.00736635 5 0.6277705 0.6147936 0.01297690 3.7850e-01 6.1087e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.8582e-01 6.7657e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03258497 5.1236e-01 lowCoverage 1.0000e+00 lowCoverage 0.7722278 0.7522124 -0.0089168 5 0.6277705 0.6380180 -0.0102475 8.4121e-01 2.5999e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.5683e-01 9.3750e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00359335 9.2508e-01 lowCoverage 1.00000000 lowCoverage 0.7709497 0.7314488 -0.00682752 3 0.608236 0.6147936 -0.0065576 6.0915e-01 5.4751e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.5531e-01 5.3129e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.04339954 5.1792e-01 lowCoverage 1.0000e+00 lowCoverage 0.7709497 0.7522124 -0.02392452 3 0.608236 0.6380180 -0.0297820 9.2686e-01 3.7109e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.9677e-01 6.8000e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0144079 8.0801e-01 lowCoverage 1.0000000 lowCoverage 0.7314488 0.7522124 -0.01605307 5 0.6147936 0.6380180 -0.02322438 8.1586e-01 3.4287e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.1286e-01 5.0495e-01 insignificant 1.00000000 1.0000000 insignificant -0.02899162 4.5968e-01 lowCoverage 1.000000 lowCoverage chr6 19912250 19913250 23415 ENSG00000200957 0.0087684 1750 42 0.0013774 1066 39 0.00058754 1307 43 0.0016079 986 31 0.0028378 687 38 0.0025101 1646 42 0.0083339 1351 43 0.0025814 1015 44 0.0036686 1243 43 0.0033634 1291 39 0.0090461 1251 41 0.0055684 1478 41 0.0078854 1305 39 0.0000000 198 10 0.0134472 1513 43 0.0056041 1380 43 0.0146808 1437 39 0.0015098 847 31 0.0000000 748 38 0.0120826 1185 44 0.0130749 392 21 0.0051587 779 33 0.046510 1378 42 0.002907 505 36 0.0375094 537 31 0.0032572 1442 43 0.0066342 807 35 0.0111111 252 18 0.033908 756 37 0.0259843 1509 43 0.0022406 1420 43 0.0021993 1831 43 0.0078313 849 42 0.0066117 854 43 0.00062854 946 36 0.0029762 446 26 0.033773 374 32 0.0056376 1188 43 0.00042577 2269 41 0.0039988 1696 43 0.00076433 1303 36 0.0000000 1551 42 0.0038769 1414 35 0.0101298 0.0022406 0.00058968 0.0040118 0.0059954 0.0047802 0.0071085 0.0044619 0.0087360 0.0056790 0.0181303 0.0027662 0.0047631 NA 0.0128403 0.0101401 0.0088901 0.0032587 0.0000000 0.0042175 0.011039 0.0035325 0.035164 0.00030579 0.0104786 0.0057486 0.0088126 0.00030303 0.0065531 0.0057954 0.0039101 0.0046564 0.0119563 0.0031465 0.00124921 4.6212e-03 0.0350932 0.0035749 0.0009110 0.0039568 0.0017506 0.0000000 0.0042175 25 0.0057423 0.0079256 -0.0019596 39 0.0057908 0.017241 -0.0114506 0.9937044 0.2226248 insignificant 1 1.00000 insignificant 0.99363411 0.74598522 insignificant 1.00000 1.00000 insignificant -0.0106015 0.0429467 weaklyHypometh 1 insignificant 0.0057423 0.0068714 -0.00040509 41 0.0057908 0.0062239 -0.00043312 8.6311e-01 9.8157e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6220e-01 9.9701e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00430342 4.3078e-01 insignificant 1.0000e+00 insignificant 0.0057423 0.0018219 0.0039200 40 0.0057908 0.0016965 0.0040942 2.7699e-01 1.0000e+00 insignificant 1.0000e+00 1.0000e+00 insignificant 6.0841e-01 1.0000e+00 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00345988 2.0209e-02 weaklyHypermeth 0.69687655 insignificant 0.0079256 0.0068714 0.00139216 39 0.017241 0.0062239 0.0110175 7.5484e-01 9.9994e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7874e-01 9.9992e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00629813 3.6758e-01 insignificant 1.0000e+00 insignificant 0.0079256 0.0018219 0.00606084 38 0.017241 0.0016965 0.0155448 2.8206e-01 1.0000e+00 insignificant 1.0000e+00 1.0000e+00 insignificant 6.9405e-01 1.0000e+00 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0140614 1.0916e-02 weaklyHypermeth 0.6185950 insignificant 0.0068714 0.0018219 0.00513989 41 0.0062239 0.0016965 0.00452736 9.9968e-01 1.0000e+00 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9993e-01 1.0000e+00 insignificant 1.00000000 1.0000000 insignificant 0.00776329 1.8011e-01 insignificant 1.000000 insignificant chr6 21490450 21491450 23445 ENSG00000205147 0.9146825 83 5 0.7966223 244 6 0.66309263 205 6 0.5666667 20 3 0.8560169 159 6 0.9523810 43 6 0.7381944 173 5 0.7508589 104 5 0.7187688 131 6 0.8877288 127 5 0.7891736 330 6 0.7353044 135 5 0.7562828 217 6 NA 0 0 0.8172078 176 6 0.8285024 116 6 0.7291783 113 5 0.7595238 44 6 0.7634796 220 6 0.9143519 70 6 0.8017380 76 6 0.5000000 2 0 0.737247 132 6 0.857682 52 5 1.0000000 4 0 0.8740124 192 5 0.8787702 78 6 0.8054113 72 6 0.754162 152 6 0.7826941 243 6 0.6730038 231 6 0.9228325 94 6 0.4419913 251 6 0.8319324 169 6 0.64504907 150 5 0.1111111 7 0 0.794509 88 5 0.6573941 223 6 0.55532213 60 3 0.5334656 72 5 0.54761905 24 2 0.6093074 29 2 0.6576623 38 5 0.8507496 0.7068126 0.62595291 0.5739424 0.8415846 0.9365079 0.7321759 0.7748619 0.7288486 0.8127555 0.7617132 0.6297764 0.6941574 NA 0.7642817 0.6754990 0.6734153 0.8349206 0.7687359 0.8387346 0.790449 0.6407210 0.751221 0.76771050 0.9867774 0.8866408 0.8347313 0.73072791 0.6391614 0.7198145 0.5936909 0.8748818 0.2046849 0.8317928 0.34709858 2.2401e-01 0.6053354 0.6439281 0.3562610 0.3945326 0.3227513 0.6346280 0.4813372 0 0.7859779 0.7966867 -0.0117529 6 0.7794226 0.786103 -0.0066803 0.8216657 0.1814735 insignificant 1 1.00000 insignificant 0.96304215 0.14417753 insignificant 1.00000 1.00000 insignificant -0.0127513 0.7699229 lowCoverage 1 lowCoverage 0.7859779 0.6002252 0.16903103 6 0.7794226 0.6246460 0.15477658 5.3494e-07 3.3702e-01 weaklyHypermeth 1.5734e-05 1.0000e+00 weaklyHypermeth 2.0931e-02 3.9112e-01 weaklyHypermeth 3.2201e-01 1.0000e+00 insignificant 0.20588023 1.1967e-01 lowCoverage 1.0000e+00 lowCoverage 0.7859779 0.4798206 0.2756405 3 0.7794226 0.5792822 0.2001404 3.4025e-14 9.9086e-01 lowCoverage 1.7012e-11 1.0000e+00 lowCoverage 4.0886e-06 8.0441e-01 lowCoverage 8.1772e-04 1.0000e+00 lowCoverage 0.20553615 3.0114e-05 lowCoverage 0.00752844 lowCoverage 0.7966867 0.6002252 0.17326269 6 0.786103 0.6246460 0.1614568 2.0056e-04 4.1782e-01 weaklyHypermeth 4.5581e-03 1.0000e+00 weaklyHypermeth 2.5347e-02 2.9551e-01 weaklyHypermeth 3.8127e-01 1.0000e+00 insignificant 0.21863157 1.0571e-01 lowCoverage 1.0000e+00 lowCoverage 0.7966867 0.4798206 0.28239686 3 0.786103 0.5792822 0.2068207 3.4721e-09 9.9914e-01 lowCoverage 1.7360e-06 1.0000e+00 lowCoverage 5.9174e-05 8.4748e-01 lowCoverage 9.8623e-03 1.0000e+00 lowCoverage 0.2182875 1.6396e-04 lowCoverage 0.0482504 lowCoverage 0.6002252 0.4798206 0.04245953 3 0.6246460 0.5792822 0.04536382 3.2409e-01 9.3400e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 6.9348e-01 8.3641e-01 lowCoverage 1.00000000 1.0000000 lowCoverage -0.00034408 9.9765e-01 lowCoverage 1.000000 lowCoverage chr6 24559850 24560850 23459 MRS2 ENSG00000124532 0.7475198 79 5 0.5249757 92 5 0.63557692 65 5 0.7695707 81 5 0.7616384 54 5 0.5869207 201 5 0.7383333 47 5 0.6860570 59 5 0.7935440 48 5 0.7337729 61 5 0.6045367 109 5 0.7781818 45 4 0.7490421 80 5 0.6888889 34 5 0.7299145 52 5 0.7000000 21 3 1.0000000 4 0 0.6777778 45 2 0.6020979 60 2 0.7629365 123 5 0.7333333 26 4 0.6047619 35 5 0.805159 54 5 0.647727 49 5 0.7083333 15 2 0.7127839 96 5 0.6072436 61 5 0.5266667 29 2 0.665608 74 5 0.6714286 97 5 0.6686869 97 5 0.7083826 161 5 0.6649386 85 5 0.5805916 44 5 0.56604171 157 5 0.4000000 10 0 0.690000 67 5 0.6322473 100 5 0.80073545 115 5 0.7837229 75 5 0.81250000 59 5 0.6909091 32 3 0.8328755 118 5 0.6948349 0.5420742 0.64478219 0.7671065 0.7965261 0.7273649 0.7834229 0.6909097 0.7981065 0.7435897 0.6361575 0.8181818 0.7744407 0.73596177 0.7459792 0.7032258 0.8636362 0.6953405 0.6553876 0.7201485 0.774194 0.5898618 0.822645 0.64821603 0.6268916 0.7615404 0.6347395 0.54838710 0.6572794 0.7265745 0.7048441 0.7097499 0.6508157 0.6049551 0.55293259 4.7312e-01 0.7161015 0.6454577 0.7604718 0.8292697 0.7768817 0.7321603 0.8349728 1 0.7227139 0.6989924 0.0209255 5 0.6993267 0.676722 0.0226047 0.2823967 0.9207321 insignificant 1 1.00000 insignificant 0.11790110 0.91817526 insignificant 1.00000 1.00000 insignificant 0.0418880 0.1787344 lowCoverage 1 lowCoverage 0.7227139 0.6198704 0.09237975 5 0.6993267 0.6140869 0.08523982 4.1757e-04 9.8984e-01 weaklyHypermeth 6.4354e-03 1.0000e+00 weaklyHypermeth 3.2308e-03 9.9905e-01 weaklyHypermeth 7.5537e-02 1.0000e+00 weaklyHypermeth 0.12459441 3.1872e-02 lowCoverage 5.8364e-01 lowCoverage 0.7231222 0.7944862 -0.0778004 5 0.7494389 0.8151858 -0.0657469 9.9997e-01 1.2899e-02 weaklyHypometh 1.0000e+00 5.4022e-01 insignificant 9.9913e-01 1.2851e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.07058430 5.5957e-02 lowCoverage 1.00000000 lowCoverage 0.6989924 0.6198704 0.07015840 5 0.676722 0.6140869 0.0626351 1.4782e-02 9.2660e-01 weaklyHypermeth 1.6836e-01 1.0000e+00 insignificant 3.1110e-02 9.0714e-01 weaklyHypermeth 4.3817e-01 1.0000e+00 insignificant 0.08270640 1.2086e-01 lowCoverage 1.0000e+00 lowCoverage 0.6989924 0.7902813 -0.09854082 5 0.676722 0.7782229 -0.1015009 9.9981e-01 3.9542e-03 weaklyHypometh 1.0000e+00 3.9542e-01 insignificant 9.9892e-01 2.0887e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.1124723 5.8971e-03 lowCoverage 0.4536219 lowCoverage 0.6198704 0.7902813 -0.16666120 5 0.6140869 0.7782229 -0.16413607 1.0000e+00 1.6596e-05 weaklyHypometh 1.0000e+00 6.3830e-04 weaklyHypometh 9.9996e-01 2.1657e-04 weaklyHypometh 1.00000000 0.0135353 weaklyHypometh -0.19517872 4.2863e-03 lowCoverage 0.217275 lowCoverage chr6 26619050 26620050 23483 BTN1A1 ENSG00000124557 0.7374509 276 8 0.5544674 235 8 0.63265192 132 8 0.7466702 173 8 0.6244318 69 6 0.5992878 417 8 0.6835685 121 8 0.7344907 132 8 0.5163492 87 6 0.7756579 90 7 0.7048435 318 8 0.6802346 67 5 0.6522944 208 8 0.8583333 40 2 0.7446134 148 8 0.6950758 65 3 0.7756133 55 3 0.7501068 214 8 0.5991453 249 8 0.7768713 326 8 0.6619987 63 6 0.5867836 88 7 0.706596 183 8 0.592272 97 6 0.7021920 73 6 0.5977632 273 8 0.4613776 118 6 0.5103168 63 5 0.686469 193 8 0.6463760 255 8 0.6661924 256 8 0.6641099 477 8 0.5411765 178 8 0.4864752 146 8 0.64159317 166 8 0.4518519 40 3 0.575205 127 8 0.6045035 275 8 0.72433524 220 8 0.7144056 234 8 0.69279780 202 8 0.7117205 208 8 0.7515647 199 8 0.7337864 0.6166617 0.57120096 0.7474487 0.6859307 0.6722472 0.7307337 0.7387619 0.6485598 0.7667015 0.7168229 0.7115457 0.6961794 0.73009553 0.7311878 0.6433381 0.7456015 0.7449344 0.6947741 0.7344455 0.617605 0.6443211 0.690356 0.66941212 0.7286029 0.6844659 0.5399731 0.69765420 0.6900504 0.6630704 0.6409128 0.6658883 0.5993815 0.5630902 0.64818951 5.7473e-01 0.5955566 0.6544555 0.7224619 0.7281052 0.7075959 0.7116404 0.7542974 3 0.7004676 0.6764843 0.0367378 8 0.6572816 0.615899 0.0413829 0.0017638 0.9983412 weaklyHypermeth 1 1.00000 insignificant 0.00027571 0.99996212 weaklyHypermeth 0.27571 1.00000 insignificant 0.0685706 0.0271434 weaklyHypermeth 1 insignificant 0.7004676 0.6190987 0.09098835 8 0.6572816 0.5397091 0.11757255 2.3579e-08 9.5514e-01 weaklyHypermeth 9.0687e-07 1.0000e+00 weaklyHypermeth 4.9137e-06 9.8628e-01 weaklyHypermeth 2.8904e-04 1.0000e+00 weaklyHypermeth 0.14197366 2.4370e-03 weaklyHypermeth 8.7036e-02 weaklyHypermeth 0.7017595 0.7027281 -0.0184830 8 0.6977751 0.7154986 -0.0177235 9.5764e-01 2.0836e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.4171e-01 4.0048e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02685686 2.2217e-01 insignificant 1.00000000 insignificant 0.6764843 0.6190987 0.05488893 8 0.615899 0.5397091 0.0761897 4.0514e-04 4.4614e-01 weaklyHypermeth 7.7911e-03 1.0000e+00 weaklyHypermeth 5.3846e-03 7.5641e-01 weaklyHypermeth 1.0856e-01 1.0000e+00 insignificant 0.07340301 7.1474e-02 insignificant 1.0000e+00 insignificant 0.6772834 0.7027281 -0.05433442 8 0.661636 0.7154986 -0.0538626 9.9872e-01 1.0024e-04 weaklyHypometh 1.0000e+00 2.5061e-02 weaklyHypometh 9.9918e-01 6.0529e-04 weaklyHypometh 1.0000e+00 2.3524e-01 insignificant -0.0954275 1.4071e-03 weaklyHypometh 0.1758848 insignificant 0.6204301 0.7027281 -0.10802402 8 0.6071727 0.7154986 -0.10832594 9.9966e-01 1.1901e-05 weaklyHypometh 1.0000e+00 4.8293e-04 weaklyHypometh 9.9929e-01 2.4751e-04 weaklyHypometh 1.00000000 0.0145595 weaklyHypometh -0.16883051 1.5094e-03 weaklyHypometh 0.170900 insignificant chr6 26887750 26888750 23488 ENSG00000210418 0.0000000 45 5 NA 0 0 NA 0 0 0.0000000 62 5 NA 0 0 0.0222222 41 5 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 0.0000000 13 0 0.0000000 10 0 0.0000000 15 0 NA 0 0 NA 0 0 0.000000 5 0 NA 0 0 NA 0 0 0.0000000 131 5 NA 0 0 NA 0 0 NA 0 0 0.0769231 65 5 0.0000000 107 5 0.0285714 34 5 NA 0 0 NA 0 0 0.00000000 114 5 0.0064103 261 5 NA 0 0 0.0253623 117 5 0.00000000 119 5 0.0675439 100 5 0.00000000 84 5 NA 0 0 0.1010742 149 5 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0.0054054 0.0175439 -0.0121659 0 0.0054054 0.017515 -0.0121097 0.9673910 0.0868006 noCoverage 1 1.00000 noCoverage 0.99706399 0.07845195 noCoverage 1.00000 1.00000 noCoverage -0.0173952 0.3171374 lowCoverage 1 lowCoverage 0.0054054 0.0101833 -0.00462819 0 0.0054054 0.0101422 -0.00473683 9.5467e-01 1.1229e-02 noCoverage 1.0000e+00 4.8821e-01 noCoverage 9.8775e-01 6.6192e-02 noCoverage 1.0000e+00 1.0000e+00 noCoverage -0.00688715 4.7570e-01 lowCoverage 1.0000e+00 lowCoverage 0.0054054 0.0509978 -0.0455146 0 0.0054054 0.0511329 -0.0457275 9.9997e-01 5.1747e-04 noCoverage 1.0000e+00 6.7851e-02 noCoverage 9.9999e-01 4.4501e-03 noCoverage 1.0000e+00 4.6289e-01 noCoverage -0.03845081 2.2577e-01 lowCoverage 1.00000000 lowCoverage 0.0175439 0.0101833 0.00766708 5 0.017515 0.0101422 0.0073728 4.5895e-01 8.8327e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.6259e-01 8.3355e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01050804 5.5709e-01 lowCoverage 1.0000e+00 lowCoverage 0.0175439 0.0509978 -0.03333010 5 0.017515 0.0511329 -0.0336178 9.9350e-01 6.3512e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8346e-01 2.5690e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0210556 5.0585e-01 lowCoverage 1.0000000 lowCoverage 0.0101626 0.0508850 -0.04083489 5 0.0084519 0.0426108 -0.03415890 9.9941e-01 1.1002e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9886e-01 3.8958e-01 insignificant 1.00000000 1.0000000 insignificant -0.03156366 3.0609e-01 lowCoverage 1.000000 lowCoverage chr6 27601350 27602350 23496 ENSG00000218347 0.7313406 415 21 0.6687851 540 22 0.72463685 208 20 0.7039223 357 20 0.6564034 233 18 0.7211117 656 22 0.7035470 304 21 0.7655888 397 22 0.5964332 171 14 0.7572235 220 18 0.7658836 851 22 0.8841991 109 9 0.7852052 323 22 0.7802746 111 13 0.7590565 331 18 0.6452020 129 8 0.7296016 637 10 0.7521110 310 17 0.7655806 301 21 0.7325998 522 17 0.7052843 148 14 0.7973135 125 12 0.789652 316 22 0.759983 207 19 0.7625214 155 14 0.7698755 595 21 0.7555281 248 19 0.8305819 138 10 0.736067 331 18 0.7858202 509 21 0.6676753 490 21 0.7430446 601 21 0.7105762 403 22 0.6549207 286 21 0.69824382 347 17 0.5245465 89 12 0.707432 317 22 0.7536626 528 21 0.78087094 397 20 0.7971421 442 20 0.74539425 344 16 0.7413644 203 14 0.7176802 400 20 0.7776672 0.6906789 0.68831756 0.7590151 0.7081963 0.7473899 0.7022413 0.7622594 0.6891817 0.8339482 0.7750735 0.8492003 0.7588463 0.69509531 0.7465352 0.6876757 0.8142023 0.8145708 0.8131639 0.7300553 0.740150 0.7966453 0.762360 0.75502762 0.7742150 0.7807580 0.7460459 0.86245384 0.7571238 0.7547051 0.7753128 0.7866981 0.6878062 0.6495207 0.72777609 6.0708e-01 0.7221547 0.7241585 0.8026009 0.7790970 0.7722675 0.7463431 0.7330589 7 0.7679023 0.7689718 -0.0073893 21 0.7215809 0.732365 -0.0107845 0.9346436 0.5104420 insignificant 1 1.00000 insignificant 0.94229239 0.41061176 insignificant 1.00000 1.00000 insignificant -0.0271769 0.1519052 insignificant 1 insignificant 0.7679123 0.7030457 0.05281373 21 0.7091640 0.6797653 0.02939870 1.3829e-05 9.9562e-01 weaklyHypermeth 2.8810e-04 1.0000e+00 weaklyHypermeth 1.6247e-04 9.9987e-01 weaklyHypermeth 6.2488e-03 1.0000e+00 weaklyHypermeth 0.05653828 1.5567e-01 insignificant 1.0000e+00 insignificant 0.7683870 0.7809524 -0.0076405 20 0.7219319 0.7386811 -0.0167492 9.8676e-01 1.2920e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.0195e-01 1.9841e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02505505 2.2884e-01 insignificant 1.00000000 insignificant 0.7688716 0.7030457 0.06237487 21 0.721147 0.6797653 0.0413815 7.7054e-05 9.9993e-01 weaklyHypermeth 2.0277e-03 1.0000e+00 weaklyHypermeth 9.1904e-05 1.0000e+00 weaklyHypermeth 4.5952e-03 1.0000e+00 weaklyHypermeth 0.08371519 5.0728e-02 insignificant 8.8996e-01 insignificant 0.7690309 0.7808296 0.00193996 20 0.724233 0.7290026 -0.0047694 8.7970e-01 1.4921e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.0557e-01 4.1173e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0021219 9.1310e-01 insignificant 1.0000000 insignificant 0.7024415 0.7811448 -0.06150718 20 0.6541465 0.7473228 -0.09317632 9.9639e-01 1.0501e-05 weaklyHypometh 1.0000e+00 4.5707e-04 weaklyHypometh 9.9994e-01 8.3133e-05 weaklyHypometh 1.00000000 0.0083133 weaklyHypometh -0.08159333 5.7327e-02 insignificant 0.831532 insignificant chr6 28619150 28620150 23517 GPX6 ENSG00000198704 0.0329795 770 19 0.0212485 1275 19 0.09491330 1110 19 0.0295436 432 11 0.0328929 903 19 0.0295541 1032 19 0.0484693 1241 19 0.0245232 1003 19 0.0272264 1424 19 0.0292965 1210 19 0.0506084 1202 19 0.0345389 1141 19 0.0701689 1101 19 0.0515266 451 10 0.0201330 1390 19 0.0150213 1055 19 0.0160989 1083 17 0.0303713 547 17 0.0270021 718 19 0.0167559 773 19 0.0848693 347 19 0.1207861 337 11 0.046490 679 19 0.028173 458 19 0.0324602 172 10 0.0429596 1417 19 0.0130099 527 19 0.0131313 333 19 0.027518 731 19 0.0290166 1444 19 0.0448991 1345 19 0.0463021 868 19 0.0340896 995 19 0.0126868 663 19 0.00000000 817 16 0.0574163 67 4 0.021861 652 19 0.0215919 1057 19 0.05510541 772 19 0.0151202 550 18 0.03254982 430 13 0.0462403 407 15 0.1159033 571 15 0.0435418 0.0341198 0.11666095 0.0369211 0.0494131 0.0315463 0.0683107 0.0430152 0.0353048 0.0384923 0.0824965 0.0458725 0.1003888 0.05331411 0.0303936 0.0192971 0.0340144 0.0276489 0.0274394 0.0218201 0.050086 0.0402628 0.049912 0.04598696 0.0508019 0.0614676 0.0211715 0.00934831 0.0431674 0.0456527 0.0668881 0.0796071 0.0288115 0.0125766 0.00010366 9.2164e-02 0.0266261 0.0125922 0.0653418 0.0270189 0.0170071 0.0609945 0.0537489 10 0.0372086 0.0467775 -0.0037394 19 0.0322014 0.043832 -0.0116302 0.7513915 0.7836390 insignificant 1 1.00000 insignificant 0.35665227 0.98483323 insignificant 1.00000 1.00000 insignificant -0.0089909 0.3768232 insignificant 1 insignificant 0.0372086 0.0176429 0.02276190 19 0.0322014 0.0176930 0.01450838 3.0646e-04 8.9934e-01 weaklyHypermeth 5.0240e-03 1.0000e+00 weaklyHypermeth 7.6688e-06 9.9991e-01 weaklyHypermeth 4.2604e-04 1.0000e+00 weaklyHypermeth 0.01053605 2.8185e-01 insignificant 1.0000e+00 insignificant 0.0372105 0.0421245 0.0029944 18 0.0338962 0.0388583 -0.0049621 1.3523e-01 4.1780e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.8096e-02 9.9707e-01 weaklyHypermeth 9.0632e-01 1.0000e+00 insignificant -0.01784018 3.6351e-01 insignificant 1.00000000 insignificant 0.0467775 0.0176429 0.02856024 19 0.043832 0.0176930 0.0261386 7.5780e-05 4.5234e-01 weaklyHypermeth 2.0277e-03 1.0000e+00 weaklyHypermeth 1.1906e-03 9.8224e-01 weaklyHypermeth 3.8406e-02 1.0000e+00 weaklyHypermeth 0.01952693 1.2363e-01 insignificant 1.0000e+00 insignificant 0.0466890 0.0421245 0.00688571 18 0.035612 0.0388583 -0.0032461 3.4316e-01 7.1007e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.5185e-01 9.7704e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0088493 6.6167e-01 insignificant 1.0000000 insignificant 0.0176554 0.0421245 -0.02829032 18 0.0186242 0.0388583 -0.02023411 5.3045e-01 5.4963e-03 weaklyHypometh 1.0000e+00 9.3158e-02 weaklyHypometh 9.0267e-01 6.6331e-02 insignificant 1.00000000 0.8727799 insignificant -0.02837622 1.8630e-01 insignificant 1.000000 insignificant chr6 28629150 28630150 23518 GPX6 ENSG00000198704 0.4555095 517 7 0.3513348 311 7 0.40390895 155 7 0.5590258 432 7 0.4659024 112 7 0.5664354 542 7 0.2194773 239 7 0.6249018 213 7 0.4254561 131 7 0.3374180 150 6 0.4287731 251 7 0.1882784 108 6 0.5373921 164 6 0.4225519 82 6 0.4898513 151 6 0.2723214 43 4 0.4733333 58 4 0.1978473 793 7 0.8072082 200 7 0.5266625 443 7 0.4224942 77 7 0.2527152 113 6 0.539107 177 7 0.079701 132 7 0.5840950 284 7 0.8085268 313 7 0.5190542 148 7 0.5265625 59 6 0.386511 253 7 0.7355469 400 7 0.8153134 361 7 0.0684075 496 7 0.0995163 287 7 0.0203169 218 7 0.11559140 243 3 0.0609921 224 6 0.056041 245 7 0.1340786 333 7 0.34521696 481 7 0.0914536 409 7 0.30292113 528 7 0.1879468 394 6 0.1410615 518 7 0.4267829 0.2898732 0.35301707 0.5681756 0.4973246 0.5446079 0.1768163 0.6005699 0.4287425 0.2996535 0.3766469 0.1413919 0.6118501 0.52367556 0.5084540 0.3302134 0.6074631 0.1854716 0.8153201 0.4816343 0.355170 0.1408216 0.512260 0.09289062 0.5578175 0.8019625 0.3945682 0.53469598 0.3241771 0.8204378 0.7892432 0.0544821 0.0771192 0.0320690 0.08316775 7.2865e-02 0.0758003 0.1038108 0.3065881 0.0800263 0.1698753 0.1614690 0.1219746 6 0.4687868 0.5266904 -0.0560388 7 0.3522518 0.460361 -0.1081090 0.9974196 0.1352489 insignificant 1 1.00000 insignificant 0.97260823 0.45708380 insignificant 1.00000 1.00000 insignificant -0.0404900 0.6207198 insignificant 1 insignificant 0.4687868 0.1245965 0.37881927 7 0.3522518 0.0672365 0.28501527 7.4097e-18 1.0000e+00 hypermethylated 7.4097e-16 1.0000e+00 hypermethylated 4.1071e-12 1.0000e+00 hypermethylated 4.1071e-09 1.0000e+00 hypermethylated 0.35659012 1.8508e-09 hypermethylated 4.6269e-07 hypermethylated 0.4689709 0.2214592 0.2503923 7 0.3962833 0.2981770 0.0981063 5.6612e-10 1.0000e+00 hypermethylated 1.4153e-07 1.0000e+00 hypermethylated 1.6461e-09 9.9836e-01 hypermethylated 8.2305e-07 1.0000e+00 hypermethylated 0.22395950 4.5823e-03 weaklyHypermeth 0.30259278 insignificant 0.5266904 0.1245965 0.43459060 7 0.460361 0.0672365 0.3931242 4.0599e-10 1.0000e+00 hypermethylated 2.7066e-08 1.0000e+00 hypermethylated 2.5567e-08 1.0000e+00 hypermethylated 4.2611e-06 1.0000e+00 hypermethylated 0.39708017 1.7360e-04 hypermethylated 1.4466e-02 hypermethylated 0.5270655 0.2214592 0.30884581 7 0.517906 0.2981770 0.2197289 1.5304e-05 9.9977e-01 hypermethylated 1.1772e-03 1.0000e+00 hypermethylated 8.5813e-04 9.9989e-01 hypermethylated 6.6010e-02 1.0000e+00 hypermethylated 0.2644495 8.3936e-03 weaklyHypermeth 0.5595741 insignificant 0.1246770 0.2214592 -0.13576755 7 0.0756411 0.2981770 -0.22253592 1.0000e+00 2.1904e-04 weaklyHypometh 1.0000e+00 7.0659e-03 weaklyHypometh 1.0000e+00 3.3417e-04 weaklyHypometh 1.00000000 0.0185650 weaklyHypometh -0.13263062 4.8021e-02 weaklyHypometh 0.778209 insignificant chr6 28740450 28741450 23522 ENSG00000210508 0.7506842 119 8 0.6760030 109 6 0.76136364 89 6 0.7454365 106 8 0.6936786 235 8 0.5555556 26 0 0.7636956 195 8 0.7607143 79 8 0.6696429 105 8 0.7995879 145 8 0.7960191 127 8 0.7503968 157 8 0.7902180 352 8 0.8475974 234 8 0.6746825 160 8 0.7228261 94 8 0.7397289 1836 8 0.8111312 106 9 0.8120370 58 3 0.8750000 12 0 0.6666667 13 0 0.8333333 8 0 0.767170 252 8 0.758523 51 3 0.8439955 41 3 0.5470522 110 3 0.8611111 42 3 0.7756944 45 3 0.833944 145 8 0.6394444 80 3 0.7720588 53 3 0.8518519 23 0 0.6807137 165 8 0.7158249 43 3 0.78064912 154 7 0.7250000 25 3 0.630423 100 3 0.9696970 32 3 0.71250484 142 3 0.7997002 128 8 0.74996732 195 8 0.8497475 168 8 0.7719697 159 8 0.8266854 0.7800248 0.81313131 0.8463183 0.8111040 0.6250000 0.7824685 0.8178571 0.7450397 0.8879477 0.8313694 0.8451940 0.8453045 0.85047799 0.8265575 0.8208937 0.8102287 0.8892622 0.8505787 0.9305556 0.780321 0.9043973 0.862294 0.82165404 0.8629349 0.7492912 0.8715278 0.85408951 0.8821734 0.7338194 0.7926091 0.9305556 0.7882674 0.7989057 0.79380001 8.1389e-01 0.7215939 0.8589902 0.8612950 0.8688073 0.8437654 0.8887486 0.8581650 0 0.8459590 0.8655852 -0.0260856 3 0.7553086 0.775780 -0.0204711 0.9055787 0.0069386 lowCoverage 1 0.99123 lowCoverage 0.99400962 0.01652338 lowCoverage 1.00000 1.00000 lowCoverage -0.0127705 0.6993545 lowCoverage 1 lowCoverage 0.8459590 0.8131021 0.03466651 3 0.7553086 0.7032557 0.05205293 1.6308e-02 9.8696e-01 lowCoverage 1.7726e-01 1.0000e+00 lowCoverage 2.3564e-01 7.6698e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.00058471 9.9121e-01 lowCoverage 1.0000e+00 lowCoverage 0.8459590 0.8825758 -0.0381877 8 0.7553086 0.7612291 -0.0059204 9.6843e-01 2.4380e-03 weaklyHypometh 1.0000e+00 2.0316e-01 insignificant 9.9230e-01 7.7422e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02697795 3.6571e-01 insignificant 1.00000000 insignificant 0.8655852 0.8131021 0.06138288 3 0.775780 0.7032557 0.0725240 3.2034e-03 9.9022e-01 lowCoverage 4.5763e-02 1.0000e+00 lowCoverage 6.9800e-02 9.8605e-01 lowCoverage 7.9318e-01 1.0000e+00 lowCoverage 0.01218579 8.3284e-01 lowCoverage 1.0000e+00 lowCoverage 0.8655852 0.8825758 -0.01137043 3 0.775780 0.7612291 0.0145506 8.2193e-01 5.3813e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 5.5836e-01 8.9460e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0142075 7.0341e-01 lowCoverage 1.0000000 lowCoverage 0.8131021 0.8825758 -0.07140091 3 0.7032557 0.7612291 -0.05797338 9.9464e-01 1.6150e-03 lowCoverage 1.0000e+00 3.2959e-02 lowCoverage 9.5296e-01 1.3151e-01 lowCoverage 1.00000000 1.0000000 lowCoverage -0.02639324 6.3729e-01 lowCoverage 1.000000 lowCoverage chr6 30177150 30178150 23532 RNF39 ENSG00000204618 0.0198889 921 25 0.0219719 1322 26 0.03629109 1333 26 0.0281188 518 19 0.0606936 713 19 0.1018291 1113 19 0.1054343 934 18 0.0607953 933 19 0.0110339 1101 20 0.0094911 975 19 0.0152636 625 20 0.0094927 675 20 0.0242961 787 19 0.0141687 444 9 0.0203650 1238 18 0.0077692 669 19 0.0102451 425 20 0.0120208 585 18 0.0796492 610 19 0.0801194 967 20 0.0183333 240 18 0.0039997 474 19 0.064712 1062 26 0.010561 435 18 0.0847467 250 18 0.0399706 1309 26 0.0388121 841 20 0.0924045 513 18 0.029800 610 16 0.0337995 1198 22 0.0223640 1106 26 0.0581520 1081 25 0.0550953 1002 26 0.0359217 488 18 0.13463144 813 19 0.0604963 220 13 0.147189 446 17 0.0497166 849 25 0.07539857 954 19 0.0787176 867 22 0.05531666 543 17 0.0939509 769 16 0.1330323 845 18 0.0249930 0.0254053 0.04109130 0.0111556 0.0185633 0.0188556 0.0225241 0.0122290 0.0152852 0.0136455 0.0194424 0.0183194 0.0268217 0.02096771 0.0246477 0.0060016 0.0036104 0.0189888 0.0305528 0.0372129 0.016333 0.0056655 0.026709 0.01413369 0.0354524 0.0496548 0.0253688 0.04301039 0.0179595 0.0325581 0.0351577 0.0195099 0.1018112 0.0307655 0.16748456 8.3682e-03 0.0512743 0.0706481 0.0335430 0.0364935 0.0227771 0.0357958 0.0608117 14 0.0221459 0.0256889 -0.0041541 18 0.0821872 0.043395 0.0387919 0.9215788 0.9014487 insignificant 1 1.00000 insignificant 0.93980132 0.90341115 insignificant 1.00000 1.00000 insignificant -0.0050244 0.6491684 insignificant 1 insignificant 0.0220932 0.0747247 -0.05201935 19 0.0742672 0.0808998 -0.00663257 9.9776e-01 2.1963e-06 weaklyHypometh 1.0000e+00 3.1376e-04 weaklyHypometh 9.7974e-01 1.2027e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04406152 7.4876e-02 insignificant 1.0000e+00 insignificant 0.0219826 0.0502892 -0.0156890 17 0.0764994 0.0966769 -0.0201775 9.9963e-01 2.3975e-02 weaklyHypometh 1.0000e+00 7.7338e-01 insignificant 9.9999e-01 1.1149e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.05083632 1.1823e-02 weaklyHypometh 0.47293084 insignificant 0.0256720 0.0749083 -0.04813620 22 0.043395 0.1025369 -0.0591417 9.9943e-01 3.5757e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9963e-01 7.1018e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03903715 1.0783e-01 insignificant 1.0000e+00 insignificant 0.0254973 0.0502765 -0.01064030 16 0.039291 0.0937473 -0.0544560 9.9771e-01 1.7639e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9928e-01 2.4119e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0458119 1.9150e-02 weaklyHypometh 0.8326170 insignificant 0.0747639 0.0503018 0.03742223 17 0.0996385 0.0997955 -0.00015698 5.7668e-01 9.9104e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7506e-01 8.4366e-01 insignificant 1.00000000 1.0000000 insignificant -0.00677480 7.7917e-01 insignificant 1.000000 insignificant chr6 30894450 30895450 23551 ENSG00000137331 0.6664586 226 8 0.5379703 159 8 0.52628140 141 7 0.7313558 144 8 0.6695930 104 9 0.5920940 450 9 0.7114636 116 7 0.7220788 120 8 0.6603789 94 6 0.6185347 133 9 0.7206861 249 10 0.4626912 123 6 0.6472460 129 9 1.0000000 2 0 0.5270731 105 8 0.6422799 80 8 0.5847981 114 6 0.5871309 133 8 0.6700084 153 8 0.6806938 302 8 0.6558081 55 5 0.6122807 114 9 0.648407 134 8 0.708235 83 6 0.7037037 46 6 0.6048285 232 9 0.6784016 78 6 0.7339286 51 5 0.650806 120 9 0.6174527 248 8 0.5903108 343 8 0.7398387 461 8 0.5325705 179 9 0.5289506 114 7 0.50457695 151 6 0.5967834 68 6 0.627816 73 6 0.5973993 214 8 0.67603890 245 8 0.6253710 223 8 0.66781160 173 6 0.5671861 175 8 0.7313936 174 10 0.6178504 0.5669801 0.60528019 0.7019997 0.6681679 0.6463073 0.7164010 0.6255438 0.6702277 0.6335515 0.7148379 0.5844081 0.6684615 NA 0.5859161 0.6342539 0.6363410 0.6093684 0.6761972 0.6520429 0.716496 0.6276467 0.629553 0.69730323 0.7311622 0.6627766 0.5732539 0.74178982 0.6563176 0.6459834 0.6397347 0.6945209 0.5750431 0.5379947 0.56820365 6.3158e-01 0.6796724 0.6232583 0.6604978 0.6703276 0.6660741 0.6308295 0.7020876 5 0.6236594 0.6434030 -0.0221371 8 0.6465767 0.717515 -0.0709379 0.9540384 0.0853277 insignificant 1 1.00000 insignificant 0.96583046 0.08182487 insignificant 1.00000 1.00000 insignificant -0.0140594 0.6307132 insignificant 1 insignificant 0.6237398 0.5744681 0.04731366 8 0.6599019 0.5562056 0.10369634 1.2480e-06 9.5590e-01 weaklyHypermeth 3.2000e-05 1.0000e+00 weaklyHypermeth 1.8768e-03 9.8649e-01 weaklyHypermeth 4.8123e-02 1.0000e+00 weaklyHypermeth 0.08325809 1.6940e-02 weaklyHypermeth 4.0334e-01 insignificant 0.6237398 0.6505051 -0.0296801 8 0.6599019 0.6771615 -0.0172596 8.4297e-01 6.4153e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 7.9564e-01 1.7100e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00561941 8.8199e-01 insignificant 1.00000000 insignificant 0.6430393 0.5744681 0.06744094 8 0.691834 0.5562056 0.1356286 4.2764e-03 9.9975e-01 weaklyHypermeth 5.7429e-02 1.0000e+00 weaklyHypermeth 3.0036e-03 9.9596e-01 weaklyHypermeth 6.9852e-02 1.0000e+00 weaklyHypermeth 0.09731745 2.6286e-03 weaklyHypermeth 1.0110e-01 insignificant 0.6430393 0.6505051 -0.00624365 8 0.691834 0.6771615 0.0146727 3.1042e-01 3.6643e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.2724e-01 7.0963e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0084399 7.9463e-01 insignificant 1.0000000 insignificant 0.5744681 0.6505051 -0.07346273 8 0.5562056 0.6771615 -0.12095592 9.6293e-01 3.6208e-04 weaklyHypometh 1.0000e+00 1.0649e-02 weaklyHypometh 9.6330e-01 1.7946e-02 weaklyHypometh 1.00000000 0.3445745 insignificant -0.08887750 3.1841e-02 weaklyHypometh 0.589642 insignificant chr6 31161650 31162650 23561 ENSG00000222895 0.7207604 124 6 0.6380882 94 6 0.44696970 62 6 0.8210826 91 6 0.5722222 43 6 0.7324719 198 6 0.5555556 18 0 0.6793212 92 6 0.7220238 35 6 0.8785714 38 6 0.7047866 206 6 0.7916667 15 0 0.8066239 72 6 0.8666667 44 6 0.7083333 60 6 0.4750000 19 3 0.5833333 9 0 0.6720829 138 6 0.6856146 117 6 0.7395778 132 6 0.5714286 25 2 0.7957875 79 6 0.785880 83 6 0.730952 46 6 0.8027778 68 6 0.7168339 150 6 0.6845085 106 6 0.8333333 12 2 0.677634 91 6 0.7028404 131 6 0.6872561 102 6 0.7895113 226 6 0.6201435 110 6 0.6877530 91 6 0.71207729 107 6 0.8055556 16 0 0.596154 51 6 0.7482154 114 6 0.66425121 91 6 0.8133614 143 6 0.68055556 72 6 0.8472222 54 6 0.7932540 94 6 0.7128304 0.6430905 0.45209091 0.8209744 0.5793333 0.7279865 0.5600000 0.6844583 0.7334643 0.8515000 0.7074068 0.7975000 0.8192949 0.86266667 0.7069444 0.5928824 0.5600000 0.6809154 0.6847115 0.7377617 0.690000 0.7840110 0.780764 0.76016667 0.8098333 0.7213211 0.6903782 0.73290859 0.6383477 0.7073373 0.6914876 0.7830812 0.6250720 0.6881073 0.70690217 8.2000e-01 0.6894231 0.7476946 0.6657444 0.8131135 0.6850000 0.8455556 0.7879286 0 0.7193528 0.7435210 -0.0307727 6 0.7448371 0.681270 0.0635670 0.5836717 0.1856885 insignificant 1 1.00000 insignificant 0.75287535 0.47191514 insignificant 1.00000 1.00000 insignificant -0.0415243 0.2309017 lowCoverage 1 lowCoverage 0.7193528 0.6932515 0.01677959 6 0.7448371 0.5918019 0.15303518 2.0091e-01 8.6288e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.2766e-01 8.0411e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00494545 9.0714e-01 lowCoverage 1.0000e+00 lowCoverage 0.7191781 0.7709251 -0.0563543 6 0.7023099 0.7619241 -0.0596142 9.9439e-01 3.1021e-02 weaklyHypometh 1.0000e+00 8.6169e-01 insignificant 9.9170e-01 9.3182e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.06969124 1.5945e-01 lowCoverage 1.00000000 lowCoverage 0.7435210 0.6932515 0.05057815 6 0.681270 0.5918019 0.0894682 2.2157e-02 9.8110e-01 weaklyHypermeth 2.3825e-01 1.0000e+00 insignificant 3.4815e-01 9.2279e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03657885 3.6479e-01 insignificant 1.0000e+00 insignificant 0.7457323 0.7709251 -0.02389349 6 0.739260 0.7619241 -0.0226646 8.6138e-01 4.7484e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.4036e-01 4.7172e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0281669 5.2890e-01 insignificant 1.0000000 insignificant 0.6960986 0.7709251 -0.07328062 6 0.6904356 0.7619241 -0.07148857 9.8495e-01 3.4193e-03 weaklyHypometh 1.0000e+00 6.2169e-02 weaklyHypometh 9.8936e-01 4.8912e-02 weaklyHypometh 1.00000000 0.6623554 insignificant -0.06474579 2.1891e-01 insignificant 1.000000 insignificant chr6 31767150 31768150 23571 ENSG00000204428 0.9708891 143 5 0.8333333 56 5 0.98888889 33 2 0.9266667 68 4 0.8906250 34 2 0.7674185 87 5 0.7649351 50 5 0.9553872 79 5 0.8920635 53 5 0.9414683 52 5 0.9468599 92 5 0.8514286 23 2 0.9629726 83 5 0.7250000 18 2 0.9806452 83 5 1.0000000 9 0 0.9333333 13 2 0.8770186 89 4 0.9040793 98 5 0.9229684 74 5 0.9777778 38 2 0.9285714 28 4 0.803728 45 2 0.970356 46 2 0.9511538 104 4 0.9234848 78 5 1.0000000 33 2 1.0000000 21 1 0.950325 69 5 0.9913043 67 5 0.8273810 73 5 0.8745809 95 5 0.7328788 60 2 0.7801724 63 5 1.00000000 45 4 0.9894737 77 4 0.818182 26 2 0.8238095 87 5 1.00000000 81 4 0.9589947 64 5 1.00000000 29 4 0.9330952 42 4 0.8750000 27 4 0.9587297 1.0000000 1.00000000 0.9050505 0.8181818 0.9400775 0.8994490 0.9663300 0.8744589 0.9556277 0.9426146 0.8463203 0.9675806 0.59696970 0.9472141 1.0000000 0.8521814 0.9385783 0.9182355 0.9008739 0.927273 0.9567100 0.819777 0.95256917 0.9703963 0.9347107 1.0000000 1.00000000 0.9277843 1.0000000 0.9805195 0.8963317 0.9184848 0.9245037 1.00000000 9.7129e-01 0.7988981 0.9688312 1.0000000 0.9419192 1.0000000 0.9230519 0.8560606 1 0.9329022 0.9397418 -0.0058711 5 0.8436020 0.900174 -0.0565724 0.8120558 0.4612351 insignificant 1 1.00000 insignificant 0.97152694 0.28435619 insignificant 1.00000 1.00000 insignificant -0.0314228 0.2351068 lowCoverage 1 lowCoverage 0.9329022 0.9413408 -0.01066453 5 0.8436020 0.6779638 0.16563824 7.1154e-01 2.4728e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.1768e-01 2.1275e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.04437970 3.9430e-01 lowCoverage 1.0000e+00 lowCoverage 0.9343598 0.9588477 -0.0279551 4 0.9164975 0.9728709 -0.0563733 9.7245e-01 2.2492e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.4827e-01 2.7327e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.05161892 1.1053e-01 lowCoverage 1.00000000 lowCoverage 0.9397418 0.9413408 0.00105446 5 0.900174 0.6779638 0.2222106 7.1845e-01 4.2844e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.1007e-01 5.7376e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.07580251 1.6885e-01 lowCoverage 1.0000e+00 lowCoverage 0.9393939 0.9588477 -0.01869321 4 0.885914 0.9728709 -0.0869572 8.8622e-01 1.9072e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 6.7429e-01 5.9312e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0201961 5.1879e-01 lowCoverage 1.0000000 lowCoverage 0.9436620 0.9588477 -0.00840331 4 0.6795776 0.9728709 -0.29329321 7.7600e-01 6.7124e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.3472e-01 4.9387e-01 lowCoverage 1.00000000 1.0000000 lowCoverage -0.09599862 1.0030e-01 lowCoverage 1.000000 lowCoverage chr6 31787750 31788750 23572 ENSG00000204424 0.7568474 287 7 0.7005851 465 7 0.58403482 186 7 0.7587662 252 7 0.8067355 179 7 0.6001763 337 7 0.6824146 194 7 0.7454549 219 7 0.7448585 194 6 0.7684722 132 7 0.5663709 324 7 0.7638628 61 3 0.7950024 181 7 0.7575823 96 4 0.7401515 167 7 0.7032967 66 3 0.6038462 132 5 0.6018619 225 7 0.7724356 284 7 0.6259765 283 7 0.7124570 124 6 0.7637427 80 2 0.790231 221 7 0.828695 106 7 0.6449580 75 2 0.7768098 437 7 0.7332510 176 7 0.7120408 113 6 0.770233 290 7 0.8167760 457 7 0.6108337 560 7 0.7636315 378 7 0.6508643 266 7 0.5916149 178 7 0.71024071 230 7 0.5262500 54 2 0.746749 169 7 0.7327389 444 7 0.72741550 257 7 0.7775857 333 7 0.58286375 294 6 0.6089460 182 3 0.5810804 298 7 0.8545585 0.7700786 0.72980405 0.8044751 0.8475223 0.8517990 0.7654747 0.8065752 0.8335323 0.8530230 0.8004467 0.7719313 0.8050963 0.76272221 0.7838212 0.8685401 0.6613506 0.8103680 0.8044731 0.8128911 0.830058 0.7269357 0.855633 0.79508933 0.7765869 0.8210374 0.7410730 0.86112340 0.8213383 0.8536573 0.7892441 0.8484330 0.5862159 0.6115477 0.64339983 4.7248e-01 0.7646564 0.7101245 0.7599244 0.8025056 0.6995002 0.6731785 0.7700538 3 0.8170932 0.8283063 -0.0077877 7 0.5805909 0.695744 -0.1151528 0.8952205 0.8322566 insignificant 1 1.00000 insignificant 0.82894606 0.59933552 insignificant 1.00000 1.00000 insignificant -0.0397017 0.1338622 insignificant 1 insignificant 0.8188235 0.7091723 0.10409625 7 0.7464740 0.6881885 0.05828547 1.0508e-03 4.9605e-01 weaklyHypermeth 1.5012e-02 1.0000e+00 weaklyHypermeth 5.9988e-02 6.7499e-01 insignificant 7.4059e-01 1.0000e+00 insignificant 0.04419369 2.9894e-01 insignificant 1.0000e+00 insignificant 0.8163265 0.7675953 0.0210727 7 0.5805909 0.5769346 0.0036563 3.7465e-01 5.2652e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.7345e-01 5.0799e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.04835834 3.1940e-01 insignificant 1.00000000 insignificant 0.8287989 0.7091723 0.11185947 7 0.751670 0.6881885 0.0634820 6.3550e-04 2.3488e-01 weaklyHypermeth 1.1769e-02 1.0000e+00 weaklyHypermeth 5.3547e-02 5.4908e-01 insignificant 6.6934e-01 1.0000e+00 insignificant 0.08389537 7.1090e-02 insignificant 1.0000e+00 insignificant 0.8282493 0.7692873 0.03248563 7 0.657712 0.6490515 0.0086602 9.3879e-02 2.8824e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.6367e-01 6.2191e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0880600 9.8597e-02 insignificant 1.0000000 insignificant 0.7091723 0.7704194 -0.09699427 7 0.6881885 0.7417731 -0.05358457 7.6805e-01 1.0709e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.2485e-01 2.0529e-01 insignificant 1.00000000 1.0000000 insignificant 0.00416465 9.4035e-01 insignificant 1.000000 insignificant chr6 31845050 31846050 23576 ENSG00000213709 0.7369770 356 5 0.6516504 134 5 0.68445748 117 5 0.9413173 312 5 0.8549020 63 5 0.8186756 382 5 0.8122449 117 5 0.8729064 114 5 0.9206349 71 3 0.6666667 62 3 0.8915927 192 5 0.7333333 29 3 0.7738095 56 5 0.8655303 50 5 0.5575451 149 5 0.9000000 76 3 1.0000000 24 3 0.8508779 880 5 0.7828505 214 5 0.9027230 190 5 0.8346154 46 3 0.8869281 59 3 0.895238 70 3 0.734127 32 5 0.9083750 272 5 0.8922137 105 5 0.8857270 108 3 0.7922619 50 3 0.832194 170 5 0.7963415 138 5 0.8943855 114 5 0.8603181 238 5 0.8219771 133 5 0.7686508 201 5 0.81538462 304 5 0.6375000 52 3 0.666829 114 6 0.8807692 188 5 0.80492320 263 5 0.8353459 181 5 0.82676129 362 5 0.9382795 478 3 0.8719697 182 5 0.8402435 0.7198104 0.77928835 0.9478629 0.9516581 0.8828490 0.8588545 0.8995255 0.9411894 0.8801843 0.9280225 0.8530466 0.9651086 0.91589862 0.8961037 0.9769585 0.9696449 0.8883806 0.8852330 0.9260842 0.942042 0.9143249 0.926926 0.68883037 0.9362796 0.9417042 0.8781448 0.86273041 0.9169391 0.8869731 0.9242162 0.9082702 0.7609654 0.9063894 0.95746189 8.3583e-01 0.9453747 0.9478908 0.9263257 0.9048698 0.8936504 0.9065973 0.9241656 3 0.8892608 0.9051355 -0.0227375 5 0.7768557 0.753192 0.0236637 0.9595313 0.1221631 insignificant 1 1.00000 insignificant 0.85831155 0.18908484 insignificant 1.00000 1.00000 insignificant -0.0401257 0.1841705 lowCoverage 1 lowCoverage 0.8887960 0.9062500 -0.02445816 5 0.7153322 0.6956184 0.01971377 3.7277e-01 4.9464e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.0416e-01 8.1281e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.04574962 3.4585e-01 lowCoverage 1.0000e+00 lowCoverage 0.8897925 0.9072306 -0.0119312 5 0.8218837 0.8281839 -0.0063002 6.8748e-01 2.7992e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.1340e-01 1.9821e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04452118 2.1385e-01 lowCoverage 1.00000000 lowCoverage 0.9051355 0.9070707 0.00057332 5 0.753192 0.7515094 0.0016826 7.1178e-02 8.9158e-01 insignificant 6.3552e-01 1.0000e+00 insignificant 9.8808e-02 6.4159e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.08587529 8.0948e-02 lowCoverage 1.0000e+00 lowCoverage 0.9053763 0.9072306 0.01191654 5 0.854469 0.8281839 0.0262850 3.8275e-01 9.0403e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.6962e-01 8.4997e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0043955 8.7963e-01 lowCoverage 1.0000000 lowCoverage 0.9124236 0.9072306 0.01534334 5 0.8235417 0.8281839 -0.00464212 3.9837e-01 7.1574e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.8081e-01 3.9611e-01 insignificant 1.00000000 1.0000000 insignificant -0.09027080 8.1339e-02 lowCoverage 0.979986 lowCoverage chr6 32078350 32079350 23581 ENSG00000204319 0.9044441 353 10 0.8111805 427 10 0.80121782 377 10 0.8762037 320 9 0.8776331 208 10 0.8890819 595 10 0.8184283 527 10 0.9146488 381 10 0.7798351 230 10 0.9073457 253 10 0.8895076 408 10 0.7658830 157 10 0.9009564 300 10 0.9250681 174 8 0.8228306 355 10 0.9211408 164 9 0.6114989 145 5 0.9224993 293 9 0.8729855 688 10 0.8665520 446 10 0.9002246 185 10 0.9350977 146 9 0.870511 357 10 0.917860 145 10 0.9359091 107 8 0.9344991 547 10 0.7579342 403 10 0.8471896 295 10 0.935071 737 10 0.9212751 565 10 0.9113376 503 10 0.9067328 482 10 0.7648744 323 10 0.5682585 355 7 0.74313508 534 10 0.6846667 73 3 0.656877 347 10 0.7844466 501 10 0.90221788 400 10 0.8579004 373 10 0.80089739 291 10 0.8291166 210 10 0.8888563 210 9 0.9070723 0.8152865 0.81315158 0.8952926 0.9028853 0.8812664 0.8247693 0.9131277 0.8716425 0.8878337 0.8886206 0.8465374 0.9112159 0.91375465 0.8946226 0.9097059 0.7132661 0.9091027 0.9006416 0.8743738 0.874856 0.9111162 0.879594 0.90329045 0.9472262 0.9174003 0.8009766 0.83254925 0.9341137 0.9206154 0.9101267 0.9075205 0.7692161 0.5307534 0.66268460 7.4001e-01 0.7063175 0.8711161 0.9144484 0.8668577 0.8294786 0.8150345 0.8807259 9 0.8823702 0.8995301 -0.0178797 10 0.7997649 0.906238 -0.1064734 0.9993602 0.1480755 insignificant 1 1.00000 insignificant 0.99978712 0.00819259 weaklyHypometh 1.00000 0.98720 insignificant -0.0438563 0.0618839 insignificant 1 insignificant 0.8823702 0.7358048 0.15379767 10 0.7997649 0.7726149 0.02714993 4.7030e-11 1.0000e+00 weaklyHypermeth 2.7665e-09 1.0000e+00 weaklyHypermeth 3.4603e-05 9.9789e-01 weaklyHypermeth 1.7302e-03 1.0000e+00 weaklyHypermeth 0.15357076 3.3977e-03 weaklyHypermeth 1.1326e-01 insignificant 0.8830194 0.8652291 0.0150164 10 0.8797413 0.8552965 0.0244448 1.5921e-02 7.2023e-01 weaklyHypermeth 4.5488e-01 1.0000e+00 insignificant 1.0730e-01 7.2831e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00185065 9.4268e-01 insignificant 1.00000000 insignificant 0.8995975 0.7351149 0.17033326 10 0.914052 0.7082303 0.2058214 1.3766e-08 1.0000e+00 weaklyHypermeth 7.6475e-07 1.0000e+00 weaklyHypermeth 4.6146e-07 1.0000e+00 weaklyHypermeth 5.7682e-05 1.0000e+00 weaklyHypermeth 0.19742709 8.9635e-04 weaklyHypermeth 5.2726e-02 weaklyHypermeth 0.8994851 0.8652291 0.03259395 10 0.896862 0.8552965 0.0415655 5.4139e-03 8.9457e-01 weaklyHypermeth 1.9335e-01 1.0000e+00 insignificant 3.0917e-02 9.2370e-01 weaklyHypermeth 9.3687e-01 1.0000e+00 insignificant 0.0420057 1.1195e-01 insignificant 1.0000000 insignificant 0.7356808 0.8652291 -0.14318426 10 0.7498764 0.8552965 -0.10542013 9.9373e-01 4.2582e-03 weaklyHypometh 1.0000e+00 7.4706e-02 weaklyHypometh 9.9991e-01 1.1611e-02 weaklyHypometh 1.00000000 0.2488062 insignificant -0.15542141 3.7039e-03 weaklyHypometh 0.217275 insignificant chr6 32111050 32112050 23583 ENSG00000204319 0.9367855 335 10 0.7943019 472 10 0.80615335 466 10 0.9476482 304 9 0.7850237 212 10 0.8826231 624 10 0.8305109 516 10 0.8241623 376 10 0.7581850 247 10 0.8118363 225 10 0.9034463 453 10 0.7256313 121 8 0.9059781 352 10 0.8725140 163 8 0.8917035 376 10 0.8023957 178 9 0.6853741 131 6 0.8836361 323 9 0.8117196 710 8 0.8734982 571 10 0.9235863 187 10 0.9103070 177 8 0.876795 316 10 0.888379 211 10 0.9122575 87 9 0.8887927 542 10 0.8515270 420 10 0.8586495 247 10 0.892475 704 10 0.9090127 582 10 0.9155894 424 10 0.9225117 469 10 0.6934471 377 10 0.6159623 341 9 0.73156006 500 10 0.7547619 52 5 0.740796 313 10 0.8648115 475 10 0.89410776 419 10 0.8910893 361 10 0.88178863 277 9 0.7278274 257 8 0.9372955 197 7 0.9283273 0.7999125 0.79768092 0.9378232 0.8433465 0.8960116 0.8109481 0.9011116 0.8290321 0.9119327 0.8984540 0.8039718 0.9006966 0.87022168 0.8950211 0.8899951 0.6477269 0.8591348 0.8863124 0.8896683 0.904164 0.9166800 0.874991 0.87816086 0.9181934 0.9012485 0.8475465 0.87840875 0.9014999 0.9163213 0.9108231 0.9078292 0.7187014 0.5810562 0.69135472 7.6161e-01 0.7183545 0.8676497 0.9019593 0.8877819 0.8602264 0.7682536 0.9115858 9 0.8746331 0.9003665 -0.0270618 10 0.8192551 0.883405 -0.0641502 0.9999911 0.0051668 weaklyHypometh 1 0.95721 insignificant 0.99966082 0.01831836 weaklyHypometh 1.00000 1.00000 insignificant -0.0591672 0.0017684 weaklyHypometh 1 insignificant 0.8746156 0.7249757 0.15377013 10 0.8028238 0.6677444 0.13507940 1.7650e-10 1.0000e+00 weaklyHypermeth 8.8250e-09 1.0000e+00 weaklyHypermeth 2.2503e-04 9.9999e-01 weaklyHypermeth 7.7596e-03 1.0000e+00 weaklyHypermeth 0.10309996 2.4970e-02 weaklyHypermeth 4.9941e-01 insignificant 0.8746331 0.8623428 0.0085508 10 0.8192551 0.8074206 0.0118346 6.6543e-01 6.3690e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.0805e-01 5.5637e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02976534 4.7780e-01 insignificant 1.00000000 insignificant 0.9003208 0.7249757 0.17802568 10 0.872806 0.6677444 0.2050615 2.1950e-12 1.0000e+00 weaklyHypermeth 1.8292e-10 1.0000e+00 weaklyHypermeth 3.4222e-05 1.0000e+00 weaklyHypermeth 2.1389e-03 1.0000e+00 weaklyHypermeth 0.16226720 3.9922e-03 weaklyHypermeth 1.3307e-01 insignificant 0.9003665 0.8623428 0.03493004 10 0.883405 0.8074206 0.0759848 1.6524e-02 9.8911e-01 weaklyHypermeth 4.8601e-01 1.0000e+00 insignificant 1.1525e-01 9.7339e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0294019 4.6394e-01 insignificant 1.0000000 insignificant 0.7249757 0.8621604 -0.15049661 10 0.6677444 0.7899133 -0.12216897 1.0000e+00 1.4497e-03 weaklyHypometh 1.0000e+00 3.0920e-02 weaklyHypometh 9.9999e-01 7.9693e-03 weaklyHypometh 1.00000000 0.2097188 insignificant -0.13286530 2.4625e-02 weaklyHypometh 0.513021 insignificant chr6 33326150 33327150 23589 ENSG00000218947 0.9131884 68 3 0.8246928 119 6 0.83169230 167 6 0.9221429 141 3 0.9236473 226 6 0.9463000 175 3 0.9065626 207 6 0.8742246 123 6 0.9147911 171 6 0.9435536 149 6 0.9056972 205 6 0.9350684 178 6 0.9592260 167 6 0.8153846 31 3 0.8805684 226 6 0.6987591 255 6 0.8755315 186 6 0.9152452 170 5 0.9420955 141 6 0.9496942 152 4 0.9070707 68 6 0.9658120 76 3 0.959637 137 6 0.939577 75 6 0.9600000 28 3 0.9283165 174 6 0.8191087 69 6 0.9402116 86 6 0.944092 103 6 0.9183420 160 6 0.9184046 140 6 0.9230586 221 5 0.8930040 158 6 0.9473485 104 6 0.83730159 81 6 0.8888889 17 1 0.899349 123 6 0.9590372 135 6 0.97619048 102 3 0.9765152 105 5 0.91351241 63 3 0.8859890 116 3 0.9761342 123 5 0.8659462 0.7607316 0.77441744 0.9218950 0.9014664 0.8934603 0.8866750 0.9320743 0.8402315 0.9178665 0.9059563 0.9304030 0.9533688 0.84270899 0.8641760 0.4056208 0.8395739 0.9573976 0.9526934 0.9057099 0.900652 0.9477490 0.939537 0.94779993 0.9523256 0.9271327 0.8053923 0.97877446 0.9234008 0.9021193 0.9427907 0.9083814 0.8910959 0.9262817 0.74736988 9.2248e-01 0.8940724 0.9581287 0.9659468 0.9607426 0.9214761 0.9076396 0.9548834 3 0.9023641 0.9237098 -0.0284363 6 0.9052457 0.924680 -0.0194348 0.8194792 0.2089497 insignificant 1 1.00000 insignificant 0.89013597 0.01261401 weaklyHypometh 1.00000 1.00000 insignificant -0.0330659 0.0739146 insignificant 1 insignificant 0.9023641 0.9029126 -0.00264619 6 0.9052457 0.9083028 -0.00305704 3.2387e-01 1.6036e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.3635e-01 7.3071e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01025150 6.6069e-01 insignificant 1.0000e+00 insignificant 0.9023641 0.9587426 -0.0742949 3 0.9052457 0.9692445 -0.0639988 9.9902e-01 8.6505e-05 lowCoverage 1.0000e+00 2.1626e-02 lowCoverage 9.9350e-01 2.0828e-05 lowCoverage 1.0000e+00 1.0414e-02 lowCoverage -0.05176497 5.7985e-02 lowCoverage 1.00000000 lowCoverage 0.9237098 0.9029126 0.02238931 6 0.924680 0.9083028 0.0163777 2.8414e-01 6.6447e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.3294e-01 5.2479e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02281437 3.0976e-01 insignificant 1.0000e+00 insignificant 0.9237098 0.9587426 -0.03080760 3 0.924680 0.9692445 -0.0445640 9.9396e-01 1.1447e-03 lowCoverage 1.0000e+00 1.6006e-01 lowCoverage 9.9268e-01 2.3348e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0186991 4.2905e-01 lowCoverage 1.0000000 lowCoverage 0.9029126 0.9587426 -0.05511778 3 0.9083028 0.9692445 -0.06094176 9.9834e-01 2.1622e-02 lowCoverage 1.0000e+00 3.0031e-01 lowCoverage 9.2039e-01 3.6381e-02 lowCoverage 1.00000000 0.5861945 lowCoverage -0.04151347 1.5075e-01 lowCoverage 1.000000 lowCoverage chr6 33453150 33454150 23593 ENSG00000217281 0.8135676 278 10 0.7249354 203 9 0.55289205 165 8 0.8158138 181 10 0.7537799 102 5 0.8118545 315 10 0.7766228 150 5 0.5541705 134 8 0.6225406 124 8 0.7465648 144 8 0.7589538 392 11 0.5431645 116 6 0.7538458 193 8 1.0000000 2 0 0.7984171 311 8 0.5299413 90 5 0.6073896 145 5 0.8646868 156 10 0.6009410 186 8 0.7909799 233 11 0.8141771 125 8 0.8611527 92 7 0.772511 251 8 0.858949 124 8 0.8095654 59 6 0.6779629 193 11 0.7808959 115 7 0.7129464 37 3 0.630395 140 5 0.7710181 183 9 0.7530346 199 8 0.7464983 410 11 0.7581019 112 8 0.6400486 223 8 0.53521191 203 8 0.7221074 84 7 0.779663 61 7 0.8196966 169 8 0.77005159 303 10 0.8144315 372 10 0.78312104 187 10 0.8625513 305 10 0.8606153 252 10 0.7010609 0.6462771 0.53114800 0.7468583 0.6282862 0.7394007 0.6852179 0.5559910 0.5186190 0.6753338 0.6818366 0.5848968 0.6641520 NA 0.6634598 0.5560408 0.5863158 0.8016076 0.6591539 0.7251378 0.679217 0.8035811 0.695117 0.72524967 0.7606307 0.5939738 0.7462435 0.65074949 0.5159099 0.6620709 0.7020784 0.6984570 0.6901616 0.6563547 0.58688213 6.8753e-01 0.7085523 0.7187959 0.7827398 0.7649514 0.7438442 0.7794951 0.7886771 5 0.6786405 0.7178423 -0.0136946 9 0.7674231 0.754540 0.0128831 0.4327584 0.3574533 insignificant 1 1.00000 insignificant 0.72927871 0.02786064 weaklyHypometh 1.00000 1.00000 insignificant -0.0447058 0.2051418 insignificant 1 insignificant 0.6786405 0.6830986 0.01279746 8 0.7674231 0.6895523 0.07787084 1.4917e-02 5.2186e-01 weaklyHypermeth 1.6575e-01 1.0000e+00 insignificant 2.9523e-01 2.2110e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01191491 8.2089e-01 insignificant 1.0000e+00 insignificant 0.6786405 0.7836505 -0.0958663 8 0.7674231 0.8319864 -0.0645633 9.6371e-01 7.5504e-06 weaklyHypometh 1.0000e+00 3.7752e-03 weaklyHypometh 9.9453e-01 2.6610e-04 weaklyHypometh 1.0000e+00 6.6526e-02 weaklyHypometh -0.09710103 9.9619e-03 weaklyHypometh 0.44552374 insignificant 0.7178423 0.6830986 0.02542158 8 0.754540 0.6895523 0.0649878 1.1266e-01 8.5785e-01 insignificant 9.3106e-01 1.0000e+00 insignificant 3.2327e-01 9.7294e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.05662067 2.6718e-01 insignificant 1.0000e+00 insignificant 0.7178423 0.7836505 -0.07737212 10 0.754540 0.8319864 -0.0774463 8.0032e-01 7.4878e-05 weaklyHypometh 1.0000e+00 2.4959e-02 weaklyHypometh 8.2002e-01 1.9389e-03 weaklyHypometh 1.0000e+00 3.8778e-01 insignificant -0.0523953 8.1122e-02 insignificant 1.0000000 insignificant 0.6830986 0.7836505 -0.10686823 7 0.6895523 0.8319864 -0.14243409 9.9600e-01 2.3732e-04 weaklyHypometh 1.0000e+00 7.4162e-03 weaklyHypometh 9.9845e-01 4.1115e-03 weaklyHypometh 1.00000000 0.1332011 insignificant -0.10901594 5.3480e-02 insignificant 0.803616 insignificant chr6 33507750 33508750 23594 SYNGAP1 ENSG00000197283 0.2346566 96 6 0.1316356 353 8 0.29323290 228 8 0.3660714 43 4 0.1072607 146 8 0.5061386 88 7 0.2524936 385 8 0.2339697 246 8 0.1573265 275 8 0.3242256 173 8 0.3199402 297 8 0.3539887 204 6 0.0645916 222 5 0.1333333 13 1 0.2306769 230 8 0.2478707 162 5 0.4044393 234 5 0.4416667 35 3 0.0631777 276 7 0.1919634 138 7 0.3794258 100 8 0.2777778 26 1 0.409912 160 8 0.258690 112 8 0.2166317 115 3 0.1393296 328 8 0.2672111 125 8 0.1261499 58 7 0.267599 181 7 0.1105641 406 8 0.1312889 352 8 0.2036591 187 7 0.8327381 196 8 0.7537361 207 8 0.75349099 287 8 0.8742857 49 5 0.877273 75 7 0.6941288 285 8 0.35701754 81 7 0.5485481 148 7 0.70625000 32 3 0.5610390 52 3 0.7228860 49 2 0.2981388 0.1721452 0.36119894 0.4197942 0.1608415 0.5706246 0.3328422 0.2868579 0.2113084 0.3884012 0.3806637 0.4473497 0.0865160 0.33260871 0.2820323 0.3410102 0.3405214 0.5365819 0.0610884 0.2754119 0.480910 0.2554093 0.478006 0.33238118 0.3035943 0.1603592 0.3512246 0.15967789 0.3367138 0.1388215 0.1568712 0.2595660 0.8947135 0.8497947 0.77085051 8.4628e-01 0.9302773 0.7919235 0.4578799 0.6115098 0.8038136 0.6158224 0.8234256 1 0.2780957 0.2260465 0.0289304 8 0.2227903 0.202015 0.0207755 0.3988898 0.2302523 insignificant 1 1.00000 insignificant 0.52977871 0.40061449 insignificant 1.00000 1.00000 insignificant 0.0205797 0.6066297 insignificant 1 insignificant 0.2780957 0.8007279 -0.54222673 8 0.2227903 0.7785662 -0.55577590 1.0000e+00 1.6304e-46 hypomethylated 1.0000e+00 1.6304e-43 hypomethylated 1.0000e+00 5.7794e-18 hypomethylated 1.0000e+00 5.7794e-15 hypomethylated -0.54467575 2.4911e-09 hypomethylated 4.9823e-07 hypomethylated 0.2780957 0.5828729 -0.3221685 7 0.2227903 0.5230948 -0.3003045 1.0000e+00 4.4691e-22 hypomethylated 1.0000e+00 4.4691e-19 hypomethylated 1.0000e+00 4.7439e-11 hypomethylated 1.0000e+00 4.7439e-08 hypomethylated -0.32621514 4.8415e-03 lowCoverage 0.30259278 lowCoverage 0.2260465 0.8007279 -0.57601921 8 0.202015 0.7785662 -0.5765514 1.0000e+00 9.8474e-37 hypomethylated 1.0000e+00 9.8474e-34 hypomethylated 1.0000e+00 2.4749e-14 hypomethylated 1.0000e+00 2.4749e-11 hypomethylated -0.56525544 5.2085e-09 hypomethylated 2.6042e-06 hypomethylated 0.2260465 0.5828729 -0.35330359 7 0.202015 0.5230948 -0.3210800 1.0000e+00 1.0185e-18 hypomethylated 1.0000e+00 1.0185e-15 hypomethylated 1.0000e+00 2.3997e-09 hypomethylated 1.0000e+00 2.3997e-06 hypomethylated -0.3467948 3.6743e-03 lowCoverage 0.3459038 lowCoverage 0.8007279 0.5828729 0.26784059 7 0.7785662 0.5230948 0.25547140 6.9709e-10 9.9981e-01 hypermethylated 2.3236e-07 1.0000e+00 hypermethylated 3.1898e-04 9.9998e-01 hypermethylated 0.07974573 1.0000000 hypermethylated 0.21846061 2.5676e-02 lowCoverage 0.523998 lowCoverage chr6 33645250 33646250 23599 ENSG00000210629,ENSG00000223251 0.6638264 210 6 0.4999491 69 6 0.56427988 107 6 0.6427579 109 6 0.6667481 69 6 0.5896130 225 6 0.6679425 142 6 0.5592532 74 6 0.6846122 83 6 0.6185516 81 6 0.6307359 125 6 0.6537698 48 6 0.7203159 83 6 NA 0 0 0.6470588 91 6 0.5527778 53 6 0.4027778 66 6 0.6481481 97 6 0.6563834 168 6 0.6095174 198 6 0.8419775 43 3 0.6756854 73 6 0.662371 120 6 0.682042 56 6 0.6435185 39 4 0.6009360 120 6 0.7888889 50 4 0.8819444 28 3 0.592262 52 6 0.5641937 178 6 0.6094780 161 6 0.5779764 282 6 0.4886861 107 6 0.6481990 58 6 0.47025862 112 6 0.5757576 54 6 0.535495 57 5 0.5542017 177 6 0.67813252 163 6 0.6844298 177 6 0.60199580 152 6 0.6697678 192 6 0.6751886 141 6 0.6833803 0.5635298 0.58282948 0.6872822 0.6735546 0.6254629 0.7118914 0.5794032 0.7113490 0.6048570 0.6272270 0.6756873 0.7354457 NA 0.6496253 0.5783219 0.4793814 0.6535346 0.6672290 0.6426088 0.788663 0.6423551 0.687328 0.69146601 0.6029496 0.6254996 0.7422680 0.84342784 0.6152737 0.5970385 0.6234966 0.6058060 0.5503214 0.6588167 0.51895219 5.4639e-01 0.5983498 0.5667943 0.6543607 0.7012073 0.6198811 0.6957842 0.6807060 4 0.6339371 0.6297837 0.0075104 6 0.6243789 0.619875 0.0045035 0.3952665 0.4616038 insignificant 1 1.00000 insignificant 0.91020360 0.03569593 inconclusive 1.00000 1.00000 insignificant -0.0620876 0.0927404 insignificant 1 insignificant 0.6339371 0.5610619 0.07940370 6 0.6243789 0.5428506 0.08152828 1.3144e-03 9.9999e-01 weaklyHypermeth 1.8512e-02 1.0000e+00 weaklyHypermeth 2.4168e-02 9.9834e-01 weaklyHypermeth 3.6071e-01 1.0000e+00 insignificant 0.06925216 5.1651e-02 insignificant 8.7544e-01 insignificant 0.6339371 0.6727273 -0.0376327 6 0.6243789 0.6643055 -0.0399266 9.5517e-01 4.8046e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.8103e-01 2.6785e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.04721770 5.5654e-02 insignificant 1.00000000 insignificant 0.6297837 0.5610619 0.07096822 6 0.619875 0.5428506 0.0770248 2.8417e-03 9.9904e-01 weaklyHypermeth 4.1198e-02 1.0000e+00 weaklyHypermeth 6.9678e-04 9.9989e-01 weaklyHypermeth 2.5601e-02 1.0000e+00 weaklyHypermeth 0.13133974 5.1578e-03 weaklyHypermeth 1.4327e-01 insignificant 0.6297837 0.6727273 -0.03935633 6 0.619875 0.6643055 -0.0444301 9.9081e-01 1.3342e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.7584e-01 7.5046e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0148699 6.6916e-01 insignificant 1.0000000 insignificant 0.5610619 0.6727273 -0.11075996 6 0.5428506 0.6643055 -0.12145486 9.9998e-01 5.9918e-04 weaklyHypometh 1.0000e+00 1.5364e-02 weaklyHypometh 9.9951e-01 8.4763e-03 weaklyHypometh 1.00000000 0.2173419 insignificant -0.11646985 5.0767e-03 weaklyHypometh 0.220727 insignificant chr6 34131450 34132450 23610 MIR1275 ENSG00000221697 0.3108481 259 13 0.2253745 244 13 0.25110318 307 13 0.3220199 351 13 0.2507794 173 13 0.4249465 483 13 0.4455060 223 10 0.3146412 305 13 0.3109918 306 13 0.3845238 326 13 0.4231866 318 13 0.4482526 203 12 0.2598939 547 13 0.5251031 216 7 0.3860130 326 13 0.4280220 93 9 0.2948148 72 6 0.2600824 404 13 0.2424564 367 13 0.2861802 486 13 0.5043823 123 12 0.0846203 277 10 0.365866 241 13 0.358557 142 13 0.2761905 104 8 0.4657363 432 13 0.4491672 217 13 0.3468772 116 9 0.308912 427 13 0.3290590 429 13 0.2896235 374 13 0.5376578 277 11 0.1554691 361 13 0.1847735 291 13 NA 0 0 0.0772436 109 13 0.149887 249 7 0.0288478 471 13 0.21738516 404 13 0.1867642 431 13 0.15586763 312 13 0.2512081 426 13 0.2796047 437 13 0.3990227 0.3223330 0.35933912 0.4166421 0.3762329 0.5274640 0.5460676 0.4194383 0.3876918 0.5281192 0.5168158 0.5548870 0.3709434 0.48310630 0.5142795 0.5991010 0.3045004 0.3662014 0.3551647 0.3310281 0.629732 0.1415095 0.425270 0.45986630 0.4008772 0.5585351 0.4973995 0.46911175 0.4023441 0.4847055 0.4050507 0.6267295 0.2064191 0.2665022 NA 1.0011e-01 0.1574922 0.0386806 0.3142914 0.2629112 0.2296848 0.3178186 0.3299580 8 0.4231730 0.4384299 -0.0306233 13 0.3233656 0.365952 -0.0425865 0.9982560 0.0112233 weaklyHypometh 1 1.00000 insignificant 0.99963658 0.02713725 weaklyHypometh 1.00000 1.00000 insignificant -0.0199838 0.6245281 insignificant 1 insignificant 0.4233650 0.1134369 0.24361968 13 0.3684746 0.0916417 0.27683285 9.5379e-24 1.0000e+00 hypermethylated 1.5897e-21 1.0000e+00 hypermethylated 4.2485e-11 1.0000e+00 hypermethylated 2.1242e-08 1.0000e+00 hypermethylated 0.22049271 2.0455e-04 hypermethylated 1.3632e-02 hypermethylated 0.4231923 0.2975124 0.1321278 13 0.3174707 0.2196631 0.0978076 9.4597e-10 9.9957e-01 weaklyHypermeth 1.8919e-07 1.0000e+00 weaklyHypermeth 4.4793e-08 9.8650e-01 weaklyHypermeth 1.4931e-05 1.0000e+00 weaklyHypermeth 0.12157101 1.5945e-03 weaklyHypermeth 0.14397432 insignificant 0.4384299 0.1135135 0.27314341 13 0.365952 0.0981876 0.2677645 6.0905e-18 1.0000e+00 hypermethylated 7.6131e-16 1.0000e+00 hypermethylated 3.6075e-09 1.0000e+00 hypermethylated 9.0189e-07 1.0000e+00 hypermethylated 0.24047647 1.1950e-04 hypermethylated 1.1950e-02 hypermethylated 0.4381737 0.2975124 0.16079061 13 0.347948 0.2196631 0.1282854 1.8326e-08 1.0000e+00 weaklyHypermeth 3.6652e-06 1.0000e+00 weaklyHypermeth 8.7204e-06 1.0000e+00 weaklyHypermeth 2.1801e-03 1.0000e+00 weaklyHypermeth 0.1415548 3.8780e-03 weaklyHypermeth 0.3459038 insignificant 0.1136671 0.2975124 -0.12317640 13 0.1057405 0.2196631 -0.11392259 9.9999e-01 8.5347e-06 weaklyHypometh 1.0000e+00 4.0642e-04 weaklyHypometh 9.9993e-01 5.4326e-04 weaklyHypometh 1.00000000 0.0285927 weaklyHypometh -0.09892171 2.7354e-02 weaklyHypometh 0.532493 insignificant chr6 34523850 34524850 23628 RPS10 ENSG00000124614 0.8388856 512 15 0.7992827 254 16 0.76095250 205 11 0.8114808 385 14 0.9507971 189 7 0.8526653 427 16 0.8643159 190 12 0.8358198 246 11 0.7367410 206 10 0.8701257 167 9 0.8554258 377 11 0.8928068 153 7 0.7684841 223 11 0.9158730 89 7 0.6613720 226 11 0.8608529 112 6 0.7513011 695 10 0.8149921 521 17 0.8472100 206 15 0.8161280 309 16 0.8508333 99 8 0.9346646 137 7 0.817479 241 15 0.904844 125 10 0.9264955 183 13 0.8155417 368 14 0.8495200 157 11 0.8509310 62 5 0.779192 191 10 0.8339691 333 15 0.8446700 268 14 0.8861069 609 15 0.6549720 282 11 0.7392188 249 12 0.63376418 440 15 0.6421569 80 9 0.702388 161 8 0.8314568 331 15 0.86416172 394 15 0.8271554 462 14 0.86385992 382 14 0.8641656 246 13 0.8341490 484 14 0.8641229 0.7983469 0.75451188 0.9182651 0.9319439 0.8338777 0.8668108 0.8628614 0.8561125 0.9250621 0.8625185 0.8582495 0.9016326 0.92702088 0.8638394 0.8867630 0.9145544 0.8561949 0.8589182 0.8638848 0.816064 0.8704344 0.791477 0.85285652 0.9128979 0.8866425 0.8445689 0.85909087 0.8696924 0.8823178 0.8758265 0.8999801 0.6976827 0.6816878 0.80695687 6.3941e-01 0.7806263 0.8274024 0.8785478 0.9086778 0.8977987 0.8445247 0.8579265 3 0.8562895 0.8597187 -0.0096257 15 0.7851493 0.833394 -0.0482443 0.9528832 0.0993134 insignificant 1 1.00000 insignificant 0.93881048 0.39814116 insignificant 1.00000 1.00000 insignificant -0.0325783 0.1162074 insignificant 1 insignificant 0.8564896 0.6979909 0.12155144 15 0.7836642 0.6902427 0.09342144 3.1690e-11 9.9982e-01 weaklyHypermeth 1.9806e-09 1.0000e+00 weaklyHypermeth 3.4092e-06 9.9992e-01 weaklyHypermeth 2.1307e-04 1.0000e+00 weaklyHypermeth 0.12461618 7.4104e-03 weaklyHypermeth 2.0028e-01 insignificant 0.8564896 0.8795732 -0.0176605 14 0.7836642 0.8541816 -0.0705174 8.9704e-01 6.2682e-03 weaklyHypometh 1.0000e+00 3.2990e-01 insignificant 6.9997e-01 1.5686e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02542273 1.4954e-01 insignificant 1.00000000 insignificant 0.8598772 0.6979909 0.14791324 15 0.833400 0.6902427 0.1431568 1.0796e-10 9.9999e-01 weaklyHypermeth 8.3044e-09 1.0000e+00 weaklyHypermeth 1.9906e-06 1.0000e+00 weaklyHypermeth 1.8096e-04 1.0000e+00 weaklyHypermeth 0.15719449 2.3136e-03 weaklyHypermeth 9.2546e-02 weaklyHypermeth 0.8598772 0.8795732 -0.00191325 14 0.833400 0.8541816 -0.0207820 7.5295e-01 3.3294e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.7110e-01 6.3967e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0071556 6.5801e-01 insignificant 1.0000000 insignificant 0.6979909 0.8795732 -0.14645673 14 0.6902427 0.8541816 -0.16393887 9.9996e-01 6.4428e-07 weaklyHypometh 1.0000e+00 5.3690e-05 weaklyHypometh 9.9988e-01 6.8398e-04 weaklyHypometh 1.00000000 0.0341988 weaklyHypometh -0.15003891 3.8126e-03 weaklyHypometh 0.217275 insignificant chr6 34620450 34621450 23634 ENSG00000221635 0.8261146 283 7 0.7059520 281 7 0.82445832 298 7 0.8556357 216 7 0.9643991 126 7 0.8884352 331 7 0.9265296 241 7 0.8415978 199 7 0.8152958 206 7 0.8994354 162 7 0.8227854 313 8 0.7626984 138 5 0.8801454 171 7 0.8538662 82 4 0.7992515 234 7 0.8561304 126 5 0.6900000 53 4 0.8409136 208 7 0.9369048 157 7 0.6948078 246 7 0.8188406 85 7 0.7870968 91 4 0.906736 149 7 0.849008 124 7 0.7413410 293 4 0.8719827 306 7 0.9215493 125 7 0.7403719 145 7 0.836279 197 7 0.9263976 328 7 0.8806616 365 8 0.9095992 322 7 0.5945128 245 7 0.7472561 241 7 0.57607929 282 8 0.5753142 136 8 0.645467 167 7 0.6239608 304 7 0.81733457 209 7 0.7964306 234 7 0.75888278 122 7 0.8096046 428 7 0.7090566 123 7 0.8283269 0.7893361 0.85286550 0.8620092 0.9520176 0.8819069 0.8972980 0.8456343 0.8115527 0.9027703 0.8596043 0.7770319 0.8437591 0.84163176 0.8250126 0.8429285 0.5221577 0.8020900 0.9304618 0.8235062 0.812118 0.7838580 0.880959 0.90598585 0.7494462 0.9166430 0.8843114 0.75780141 0.8546693 0.9206838 0.8797410 0.9054320 0.4837647 0.6285119 0.55905015 5.4520e-01 0.6044973 0.5557955 0.7624970 0.8032483 0.7280074 0.7889183 0.6867640 7 0.8467207 0.8743083 -0.0293685 7 0.8233438 0.875961 -0.0526174 0.9973982 0.0028705 weaklyHypometh 1 0.95684 insignificant 0.92067741 0.04716056 weaklyHypometh 1.00000 1.00000 insignificant -0.0148875 0.5657316 insignificant 1 insignificant 0.8467207 0.5687273 0.27102533 7 0.8233438 0.5875999 0.23574386 4.1541e-22 1.0000e+00 hypermethylated 5.9345e-20 1.0000e+00 hypermethylated 9.2525e-10 9.9966e-01 hypermethylated 1.8505e-07 1.0000e+00 hypermethylated 0.20716949 7.8476e-05 hypermethylated 6.0366e-03 hypermethylated 0.8467207 0.7885305 0.0713958 7 0.8233438 0.8161116 0.0072322 2.3319e-06 8.0973e-01 weaklyHypermeth 2.1199e-04 1.0000e+00 weaklyHypermeth 3.0217e-05 9.8854e-01 weaklyHypermeth 3.5473e-03 1.0000e+00 weaklyHypermeth 0.05600599 5.7109e-02 insignificant 1.00000000 insignificant 0.8743083 0.5687273 0.29728915 7 0.875961 0.5875999 0.2883613 3.7130e-19 1.0000e+00 hypermethylated 5.3043e-17 1.0000e+00 hypermethylated 3.5410e-09 1.0000e+00 hypermethylated 9.0189e-07 1.0000e+00 hypermethylated 0.22205698 4.2131e-05 hypermethylated 4.6812e-03 hypermethylated 0.8743083 0.7885305 0.09365921 7 0.875961 0.8161116 0.0598496 1.3039e-07 9.7949e-01 weaklyHypermeth 2.1732e-05 1.0000e+00 weaklyHypermeth 7.4899e-05 9.9439e-01 weaklyHypermeth 1.0700e-02 1.0000e+00 weaklyHypermeth 0.0708935 2.5976e-02 weaklyHypermeth 0.9277085 insignificant 0.5687273 0.7885305 -0.17797192 7 0.5875999 0.8161116 -0.22851165 9.9181e-01 2.8445e-06 weaklyHypometh 1.0000e+00 1.6732e-04 weaklyHypometh 9.9780e-01 1.5285e-04 weaklyHypometh 1.00000000 0.0117579 weaklyHypometh -0.15116349 1.4887e-03 weaklyHypometh 0.170900 insignificant chr6 34651850 34652850 23637 ENSG00000196114 0.9058553 175 5 0.9275396 190 5 0.76120384 156 5 0.9575934 205 5 0.8202699 85 4 0.9007465 320 5 0.8922888 96 4 0.9302682 128 5 0.9413919 170 5 0.9677054 139 5 0.9638095 118 5 0.9116770 62 4 0.9630719 160 5 0.9244269 95 5 0.9601078 178 5 0.9616633 101 4 0.9577778 49 4 0.9594045 223 4 0.9666667 70 4 0.9564954 197 5 0.8298368 69 4 0.9252174 84 4 0.972829 142 4 0.950303 103 5 1.0000000 43 4 0.9666667 82 5 0.9591338 98 4 0.8472720 95 5 0.904762 94 5 0.9583765 212 5 0.9431988 147 5 0.9407159 252 5 0.9561897 148 5 0.9322134 62 4 0.66666667 53 3 1.0000000 14 0 0.874510 137 5 0.8642857 134 5 0.97664230 229 4 0.9819805 163 4 0.96572650 144 4 0.8089431 118 4 0.9681034 158 4 0.9133250 0.9052249 0.74563242 0.9421155 0.8470865 0.8810905 0.9186993 0.9019864 0.9072424 0.9564733 0.9746482 0.9074231 0.9371726 0.90932918 0.9544816 0.9485312 0.9267533 0.9149076 0.9553783 0.9524191 0.897800 0.8682393 0.959145 0.97644530 1.0000000 0.9719858 0.9494841 0.85674566 0.9004053 0.9428215 0.9249510 0.9131994 0.9648581 0.9335632 0.83632256 9.9847e-01 0.9358226 0.7896825 0.9659517 0.9748526 0.9490756 0.9467220 0.9773783 4 0.9149520 0.9317382 -0.0142439 5 0.9236617 0.938463 -0.0148014 0.9577091 0.1017278 insignificant 1 1.00000 insignificant 0.94931906 0.12500176 insignificant 1.00000 1.00000 insignificant -0.0066945 0.7243739 lowCoverage 1 lowCoverage 0.9149520 0.9014599 0.01566121 5 0.9236617 0.8996821 0.02397953 4.5411e-02 4.0467e-02 weaklyHypermeth 4.2841e-01 1.0000e+00 insignificant 3.4341e-01 1.1570e-02 inconclusive 1.0000e+00 9.6420e-01 insignificant 0.04418730 4.0681e-01 lowCoverage 1.0000e+00 lowCoverage 0.9149811 0.9618227 -0.0494526 4 0.9363847 0.8103947 0.1259900 9.9999e-01 3.5221e-03 lowCoverage 1.0000e+00 2.5158e-01 lowCoverage 9.9911e-01 4.3861e-03 lowCoverage 1.0000e+00 4.6289e-01 lowCoverage -0.01378099 7.1004e-01 lowCoverage 1.00000000 lowCoverage 0.9317382 0.9014599 0.02977499 5 0.938463 0.8996821 0.0387809 2.9513e-02 1.5564e-01 weaklyHypermeth 3.0742e-01 1.0000e+00 insignificant 3.1727e-01 8.7054e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 0.05088179 3.4854e-01 lowCoverage 1.0000e+00 lowCoverage 0.9317382 0.9630086 -0.03221438 4 0.938463 0.9724736 -0.0340106 9.8734e-01 3.4896e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.9110e-01 7.7131e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0070865 8.5095e-01 lowCoverage 1.0000000 lowCoverage 0.9014599 0.9630086 -0.06142695 4 0.8996821 0.9724736 -0.07279148 4.9207e-01 1.9855e-02 lowCoverage 1.0000e+00 2.9029e-01 lowCoverage 5.0282e-01 1.2925e-01 lowCoverage 1.00000000 1.0000000 lowCoverage -0.05796829 3.4605e-01 lowCoverage 1.000000 lowCoverage chr6 35807550 35808550 23679 FKBP5 ENSG00000096060 0.0396592 1059 30 0.0984242 645 30 0.03387818 861 30 0.0085264 1235 30 0.0109520 547 26 0.0848601 1344 31 0.0021289 827 30 0.0352087 711 30 0.0216971 1363 30 0.0865228 1532 30 0.0369914 633 30 0.0031169 1310 30 0.0421763 1101 30 0.0000000 483 23 0.0053349 1403 30 0.0335807 929 30 0.0098289 669 27 0.0606991 1556 30 0.1152958 372 26 0.0930543 1068 30 0.0685054 452 31 0.0757184 924 30 0.045740 768 25 0.043339 494 30 0.1098556 806 30 0.0227966 997 30 0.0526476 683 31 0.0607253 519 28 0.074804 515 27 0.0180072 872 30 0.0392547 726 30 0.0657185 1138 30 0.0533033 581 30 0.0077822 390 22 0.07784679 317 15 0.0011494 443 24 0.071191 467 33 0.0891506 717 31 0.02171288 1530 30 0.0674630 1085 28 0.00243728 1139 30 0.0625722 1115 30 0.0631716 1297 26 0.0100887 0.0192143 0.00407719 0.0063053 0.0077014 0.0215203 0.0029069 0.0126180 0.0077631 0.0076486 0.0112163 0.0051477 0.0055132 0.00085217 0.0061356 0.0113518 0.0111888 0.0059702 0.0343795 0.0226590 0.053723 0.0041202 0.035174 0.01503905 0.0141810 0.0056490 0.0218037 0.03518960 0.0169327 0.0027618 0.0073740 0.0093182 0.0043437 0.0108763 0.06360364 1.3712e-03 0.0471422 0.0111140 0.0048294 0.0153986 0.0036550 0.0067993 0.0211445 21 0.0123168 0.0219249 -0.0051814 30 0.0708194 0.056606 0.0142133 0.9941628 0.0516618 insignificant 1 1.00000 insignificant 0.99768505 0.14707799 insignificant 1.00000 1.00000 insignificant -0.0153292 0.1716331 insignificant 1 insignificant 0.0123168 0.0308748 -0.01055334 30 0.0708194 0.0699711 0.00084831 9.7459e-01 5.4362e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7646e-01 9.1680e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00897378 6.1690e-01 insignificant 1.0000e+00 insignificant 0.0119296 0.0092442 0.0010914 30 0.0440152 0.0562469 -0.0122317 9.4754e-01 7.2073e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7744e-01 8.3838e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00237460 8.8246e-01 insignificant 1.00000000 insignificant 0.0219249 0.0308748 -0.00523900 30 0.056606 0.0699711 -0.0133650 9.1898e-01 5.2219e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.8011e-01 9.6946e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00635547 7.1687e-01 insignificant 1.0000e+00 insignificant 0.0216553 0.0092442 0.00601839 30 0.054503 0.0562469 -0.0017436 5.3157e-01 9.7942e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.9373e-01 9.9024e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0129546 4.2050e-01 insignificant 1.0000000 insignificant 0.0299130 0.0092442 0.00968051 30 0.0583930 0.0562469 0.00214612 8.4200e-01 7.5675e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9436e-01 8.4497e-01 insignificant 1.00000000 1.0000000 insignificant 0.00659918 7.5063e-01 insignificant 1.000000 insignificant chr6 36552850 36553850 23693 ENSG00000222599 0.8661311 203 12 0.7831937 194 11 0.83390725 120 5 0.8488252 211 10 0.8051407 87 10 0.8955744 198 11 0.7913919 80 7 0.8581353 193 12 0.8197658 78 10 0.8238480 108 9 0.8391797 338 11 0.9470899 25 1 0.6915476 191 9 0.8407407 42 7 0.8658097 118 9 0.9194805 32 4 0.7262626 45 4 0.8508249 172 9 0.8315743 180 8 0.8436037 191 11 0.7712843 61 5 0.8104167 55 5 0.802999 150 11 0.870513 71 9 0.8098485 60 6 0.8069889 232 11 0.7185065 66 5 0.7843137 40 3 0.759354 171 9 0.8598152 270 11 0.8133029 201 12 0.8935143 300 12 0.8498451 218 11 0.6888150 163 11 0.91664538 310 11 0.7803030 30 2 0.829077 130 11 0.8695040 220 11 0.77511154 179 12 0.8561612 241 11 0.92372782 189 9 0.9015840 54 7 0.8969814 188 9 0.8773182 0.8014334 0.80961460 0.9067045 0.7514077 0.8650322 0.7814777 0.8659184 0.8312487 0.8553841 0.8308867 0.8811682 0.7924497 0.84577084 0.8510164 0.8874401 0.7065602 0.8867139 0.8348704 0.8391045 0.882144 0.8914687 0.858252 0.95147135 0.8397571 0.8757784 0.7593170 0.88909178 0.8837808 0.8802757 0.8406588 0.8695927 0.8237549 0.7901154 0.89103747 8.1073e-01 0.7984341 0.8236098 0.8128163 0.9104851 0.9130337 0.9357751 0.9016437 2 0.8606557 0.8853047 -0.0175851 11 0.8496537 0.807496 0.0421577 0.8397561 0.4201603 insignificant 1 1.00000 insignificant 0.92392958 0.56279769 insignificant 1.00000 1.00000 insignificant 0.0256967 0.1922784 insignificant 1 insignificant 0.8604568 0.8739496 0.00294760 11 0.8066976 0.8339373 -0.02723974 3.0126e-01 1.3436e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.3768e-01 5.4163e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01173646 7.4719e-01 insignificant 1.0000e+00 insignificant 0.8604568 0.8895417 -0.0388311 10 0.8066976 0.8369705 -0.0302729 9.2737e-01 6.6160e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4445e-01 1.3185e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03661183 2.5747e-01 insignificant 1.00000000 insignificant 0.8860228 0.8739496 0.01916673 11 0.800114 0.8339373 -0.0338235 2.2028e-01 4.9194e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.1901e-01 4.9775e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01396020 7.0471e-01 insignificant 1.0000e+00 insignificant 0.8860228 0.8895417 -0.02038067 10 0.800114 0.8369705 -0.0368566 9.8322e-01 1.7272e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.5641e-01 3.3849e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0623085 7.8452e-02 insignificant 1.0000000 insignificant 0.8739496 0.8895417 -0.04808616 10 0.8339373 0.8369705 -0.00303317 8.9708e-01 8.6020e-02 insignificant 1.0000e+00 8.6889e-01 insignificant 9.9087e-01 1.3826e-01 insignificant 1.00000000 1.0000000 insignificant -0.04834828 2.7663e-01 insignificant 1.000000 insignificant chr6 36736650 36737650 23698 SFRS3 ENSG00000112081 0.2373341 448 14 0.1209935 595 14 0.30463328 739 14 0.1531927 507 14 0.2522807 516 14 0.1119889 801 14 0.1163369 500 14 0.3414196 639 14 0.3223513 444 14 0.2002861 1018 14 0.1864322 594 14 0.1593455 614 14 0.1250998 738 14 0.4340394 614 14 0.4148127 659 14 0.1968045 714 15 0.0375000 128 12 0.1094141 758 14 0.0478018 847 14 0.2233355 406 14 0.0818250 254 14 0.0584951 477 14 0.066006 326 14 0.056933 419 14 0.4315476 248 14 0.7099640 397 14 0.0898618 839 14 0.1699104 261 14 0.139781 797 14 0.5715800 598 14 0.1020446 540 14 0.2019809 484 14 0.0921263 420 14 0.1982398 411 14 0.09450830 555 12 0.0974305 205 12 0.050929 447 17 0.0390955 655 14 0.19487003 604 14 0.1863066 543 14 0.17041347 669 14 0.3399272 519 14 0.1839824 778 14 0.1650203 0.0677580 0.20604660 0.1497787 0.1958201 0.1386277 0.1653619 0.3430645 0.3338815 0.1914203 0.2230179 0.1708735 0.1236805 0.40785938 0.4394256 0.1761086 0.0453712 0.1313748 0.0501558 0.1575874 0.086393 0.0567173 0.067157 0.07428614 0.4409830 0.7999152 0.1103621 0.21359741 0.1789677 0.5526629 0.1037882 0.1627016 0.0764428 0.1714296 0.09130949 9.3385e-02 0.0560546 0.0412361 0.1825712 0.2131666 0.1603276 0.3327453 0.2001027 14 0.2150012 0.2343972 -0.0282664 14 0.2261405 0.172274 0.0538666 0.9739517 0.2138703 insignificant 1 1.00000 insignificant 0.50426407 0.99782283 insignificant 1.00000 1.00000 insignificant -0.0185572 0.7915571 insignificant 1 insignificant 0.2146989 0.0965466 0.11373111 14 0.1612546 0.0763040 0.08495060 4.0488e-08 1.0000e+00 weaklyHypermeth 1.4995e-06 1.0000e+00 weaklyHypermeth 4.3456e-09 1.0000e+00 weaklyHypermeth 5.4320e-07 1.0000e+00 weaklyHypermeth 0.10938197 4.8798e-03 weaklyHypermeth 1.5249e-01 insignificant 0.2149975 0.2367491 -0.0312182 14 0.1769850 0.1900618 -0.0130768 7.1403e-01 1.9814e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.5492e-01 7.8127e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01032983 8.0269e-01 insignificant 1.00000000 insignificant 0.2346468 0.0965466 0.13928351 14 0.189501 0.0763040 0.1131974 3.4165e-04 1.0000e+00 weaklyHypermeth 7.0561e-03 1.0000e+00 weaklyHypermeth 3.1704e-05 1.0000e+00 weaklyHypermeth 2.1136e-03 1.0000e+00 weaklyHypermeth 0.12793921 8.2273e-02 insignificant 1.0000e+00 insignificant 0.2350427 0.2367491 0.00319064 14 0.213139 0.1900618 0.0230770 3.6707e-01 4.9685e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7228e-01 1.6658e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0082274 9.0994e-01 insignificant 1.0000000 insignificant 0.0968703 0.2367491 -0.14268107 14 0.0897694 0.1900618 -0.10029243 9.9960e-01 2.4240e-09 weaklyHypometh 1.0000e+00 3.0300e-07 weaklyHypometh 1.0000e+00 9.4609e-07 weaklyHypometh 1.00000000 0.0007907 weaklyHypometh -0.11971180 1.6048e-02 weaklyHypometh 0.389802 insignificant chr6 36909750 36910750 23705 ENSG00000214771 0.8555436 205 5 0.7195496 112 5 0.85342105 111 5 0.9044723 163 5 0.9274725 44 5 0.8315586 287 5 0.8573593 78 5 0.9137189 112 5 0.8934079 119 5 0.9062538 97 5 0.8554581 164 5 0.7672727 52 5 0.8256404 180 5 0.9087481 75 5 0.8838690 123 5 1.0000000 28 3 1.0000000 14 0 0.9321501 233 5 0.8840000 62 2 0.9024542 178 5 0.9600000 25 2 0.7749450 99 5 0.904627 157 5 0.882020 74 5 0.9882353 43 2 0.8271526 116 5 0.7859071 91 5 0.6179630 77 5 0.824860 67 5 0.8481275 132 5 0.7833333 86 5 0.8589037 263 5 0.5824985 152 5 0.4800000 48 2 0.79023810 144 5 0.4666667 17 0 0.661546 109 5 0.3569887 177 5 0.88439890 161 5 0.8798718 96 5 0.84037267 155 5 0.8972024 130 5 0.9523850 151 5 0.8615450 0.7632042 0.88463158 0.9267263 0.9428571 0.8693221 0.8807504 0.8918255 0.9213327 0.9087760 0.8840230 0.7105455 0.8307701 0.89799899 0.8704524 1.0000000 1.0000000 0.9219365 0.9194667 0.9119756 0.930667 0.7645320 0.916939 0.90350168 0.9803922 0.8145582 0.7788805 0.66213161 0.8737927 0.8181337 0.8050794 0.8910297 0.6521369 0.6993333 0.88812698 4.7889e-01 0.7001261 0.4716247 0.8820921 0.8708889 0.8281988 0.8797222 0.9466993 2 0.8723841 0.8325203 0.0413564 5 0.8695720 0.831686 0.0378865 0.0214553 0.9831660 weaklyHypermeth 1 1.00000 insignificant 0.05599863 0.98120237 insignificant 1.00000 1.00000 insignificant 0.0431113 0.1900851 lowCoverage 1 lowCoverage 0.8723841 0.5734158 0.29369789 5 0.8695720 0.5851762 0.28439581 2.5843e-16 9.9876e-01 hypermethylated 2.1536e-14 1.0000e+00 hypermethylated 1.0823e-06 9.9984e-01 hypermethylated 7.2153e-05 1.0000e+00 hypermethylated 0.32479454 3.0504e-03 lowCoverage 1.0519e-01 lowCoverage 0.8723841 0.8874459 -0.0149592 5 0.8695720 0.8908803 -0.0213083 6.7134e-01 1.1103e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.2619e-01 4.8398e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00972863 6.8618e-01 lowCoverage 1.00000000 lowCoverage 0.8325203 0.5734158 0.23949094 5 0.831686 0.5851762 0.2465093 2.0763e-08 9.9808e-01 hypermethylated 1.0928e-06 1.0000e+00 hypermethylated 4.9563e-05 9.9953e-01 hypermethylated 2.6086e-03 1.0000e+00 hypermethylated 0.28168326 4.7067e-03 lowCoverage 1.4117e-01 lowCoverage 0.8325203 0.8874459 -0.05150613 5 0.831686 0.8908803 -0.0591948 9.7506e-01 1.2551e-02 weaklyHypometh 1.0000e+00 8.3677e-01 insignificant 9.6752e-01 1.0493e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0528399 1.3292e-01 lowCoverage 1.0000000 lowCoverage 0.5734158 0.8874459 -0.31553714 5 0.5851762 0.8908803 -0.30570408 9.8790e-01 4.7924e-06 hypomethylated 1.0000e+00 2.6624e-04 hypomethylated 9.9355e-01 1.0761e-03 weaklyHypometh 1.00000000 0.0467889 weaklyHypometh -0.33452317 2.4902e-03 lowCoverage 0.191551 lowCoverage chr6 37134450 37135450 23720 FGD2 ENSG00000146192 0.0225012 456 5 0.0470610 387 6 0.03850117 364 6 0.0178056 427 5 0.0219242 225 6 0.0440857 522 6 0.0312773 406 6 0.0240195 391 6 0.0134368 494 6 0.0126619 350 6 0.0538838 347 6 0.0683199 216 6 0.0229876 328 6 0.0000000 60 2 0.0093550 448 6 0.0921681 266 6 0.0144915 367 5 0.0241108 500 5 0.1654175 253 5 0.0233855 394 6 0.0368906 153 6 0.0157807 244 6 0.059392 218 6 0.013039 149 6 0.0046296 173 5 0.0128760 490 6 0.0077519 290 6 0.0057143 108 6 0.045848 358 5 0.0086316 602 6 0.1679051 497 6 0.0509511 520 6 0.0126232 354 6 0.0000000 210 5 0.00000000 127 2 0.0000000 55 5 0.002849 187 6 0.0000000 495 6 0.03320350 419 5 0.0724760 451 5 0.01685769 496 5 0.0072777 456 5 0.0769712 498 6 0.0337612 0.0416762 0.04968580 0.0210692 0.0397849 0.0391151 0.0495483 0.0303206 0.0207030 0.0132822 0.0771075 0.0895537 0.0329407 0.01585133 0.0183600 0.0589400 0.0221567 0.0428049 0.0482675 0.0279555 0.064891 0.0124323 0.051277 0.02383296 0.0041010 0.0148972 0.0233474 0.02007874 0.0483260 0.0094951 0.0176332 0.0705006 0.0131050 0.0000000 0.00000000 2.4606e-05 0.0085807 0.0000000 0.0326499 0.0265305 0.0231794 0.0139761 0.0401330 5 0.0337453 0.0302472 0.0042670 6 0.0421130 0.047432 -0.0053194 0.3634354 0.6426801 insignificant 1 1.00000 insignificant 0.03571315 0.99279958 weaklyHypermeth 1.00000 1.00000 insignificant 0.0015856 0.9203181 insignificant 1 insignificant 0.0337453 0.0042017 0.03087885 6 0.0421130 0.0030743 0.03903866 3.7023e-07 9.9997e-01 weaklyHypermeth 1.2341e-05 1.0000e+00 weaklyHypermeth 6.5618e-08 1.0000e+00 weaklyHypermeth 5.9653e-06 1.0000e+00 weaklyHypermeth 0.03479101 5.5885e-04 weaklyHypermeth 3.2873e-02 weaklyHypermeth 0.0336532 0.0297542 0.0032959 5 0.0324651 0.0557109 -0.0232457 1.7200e-01 7.6527e-03 inconclusive 1.0000e+00 3.6441e-01 insignificant 9.0007e-02 3.1742e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00398752 8.1601e-01 insignificant 1.00000000 insignificant 0.0302472 0.0042017 0.02575835 6 0.047432 0.0030743 0.0443581 6.8759e-04 9.9876e-01 weaklyHypermeth 1.2502e-02 1.0000e+00 weaklyHypermeth 6.6164e-04 9.9896e-01 weaklyHypermeth 2.5448e-02 1.0000e+00 weaklyHypermeth 0.03320546 2.9923e-02 weaklyHypermeth 6.1067e-01 insignificant 0.0300316 0.0297542 0.00143199 5 0.027560 0.0557109 -0.0281509 5.4815e-01 2.8771e-03 inconclusive 1.0000e+00 3.1968e-01 insignificant 9.3987e-01 4.6565e-02 inconclusive 1.0000e+00 1.0000e+00 insignificant -0.0055731 7.7999e-01 insignificant 1.0000000 insignificant 0.0042046 0.0297542 -0.02527473 5 0.0035867 0.0557109 -0.05212417 1.0000e+00 1.0513e-05 weaklyHypometh 1.0000e+00 4.5707e-04 weaklyHypometh 1.0000e+00 2.4038e-05 weaklyHypometh 1.00000000 0.0034339 weaklyHypometh -0.03877853 5.2219e-02 insignificant 0.803616 insignificant chr6 37166150 37167150 23724 FGD2 ENSG00000146192 0.8007180 173 6 0.6138889 53 6 0.62481685 81 6 0.9175084 68 6 0.7333333 32 5 0.8450203 210 6 0.7576923 77 6 0.6224286 54 5 0.6954365 60 5 0.6620370 51 5 0.8219653 119 6 0.7755291 47 6 0.8289562 60 6 NA 0 0 0.8299433 86 6 0.8377595 66 6 0.8241508 76 6 0.8470246 107 6 0.8955128 66 6 0.8507588 166 6 0.8888889 23 2 0.9025641 44 4 0.763400 107 6 0.833333 25 2 0.9333333 25 3 0.7797365 91 6 0.8806349 29 4 0.5000000 12 0 0.827778 54 4 0.8222151 101 5 0.8659188 70 4 0.8416748 240 6 0.6981227 75 5 0.7935897 71 6 0.70972222 74 6 0.7465914 52 6 0.855159 29 3 0.7343434 103 6 0.84835215 192 6 0.8837269 188 6 0.76926129 108 6 0.8791586 240 6 0.8798696 118 6 0.8025166 0.6201018 0.61351816 0.9127149 0.7913486 0.8427153 0.7624780 0.6357424 0.7431389 0.7287956 0.8284553 0.8104629 0.8602822 NA 0.8210844 0.8305651 0.8327334 0.8458557 0.9128009 0.8318947 0.895674 0.8784498 0.755508 0.76590331 0.9312977 0.7989006 0.8611074 0.58015267 0.8409669 0.8033344 0.8385692 0.8252638 0.6411501 0.7922783 0.70082697 7.2520e-01 0.8560523 0.7093916 0.8487956 0.8952979 0.7564103 0.8700649 0.8864435 2 0.8026634 0.8160780 -0.0220758 6 0.7981776 0.825448 -0.0272701 0.8750748 0.1005259 insignificant 1 1.00000 insignificant 0.98414074 0.00228916 weaklyHypometh 1.00000 0.57229 insignificant -0.0418259 0.2943028 lowCoverage 1 lowCoverage 0.8026634 0.7128713 0.07985911 6 0.7981776 0.7393510 0.05882659 4.1178e-04 8.5899e-01 weaklyHypermeth 6.4354e-03 1.0000e+00 weaklyHypermeth 4.7080e-02 5.5149e-01 weaklyHypermeth 5.9595e-01 1.0000e+00 insignificant 0.02187586 5.0878e-01 insignificant 1.0000e+00 insignificant 0.8026634 0.8664303 -0.0594499 6 0.7981776 0.8584063 -0.0602288 9.9942e-01 1.2965e-02 weaklyHypometh 1.0000e+00 5.4022e-01 insignificant 9.9956e-01 4.6289e-03 weaklyHypometh 1.0000e+00 4.6289e-01 insignificant -0.07394315 3.0835e-02 weaklyHypometh 0.90165689 insignificant 0.8160780 0.7128713 0.10527004 6 0.825448 0.7393510 0.0860967 1.0130e-04 9.8976e-01 weaklyHypermeth 2.5325e-03 1.0000e+00 weaklyHypermeth 1.6406e-03 9.8998e-01 weaklyHypermeth 4.7570e-02 1.0000e+00 weaklyHypermeth 0.06370179 1.3355e-01 lowCoverage 1.0000e+00 lowCoverage 0.8160780 0.8664303 -0.03559865 6 0.825448 0.8584063 -0.0329586 9.3710e-01 1.7062e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.4926e-01 6.1778e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0321172 4.2240e-01 lowCoverage 1.0000000 lowCoverage 0.7128713 0.8664303 -0.14090513 6 0.7393510 0.8584063 -0.11905535 9.9907e-01 7.0943e-06 weaklyHypometh 1.0000e+00 3.5472e-04 weaklyHypometh 9.9671e-01 3.3098e-03 weaklyHypometh 1.00000000 0.1141303 insignificant -0.09581901 1.5871e-02 weaklyHypometh 0.389802 insignificant chr6 37301450 37302450 23741 PIM1 ENSG00000137193 0.6635951 85 5 0.6370400 89 6 0.60330688 68 8 0.7252747 76 5 0.5793934 125 8 0.8670654 81 5 0.7077279 110 8 0.7776515 81 7 0.5647727 57 5 0.9236111 33 2 0.7000924 114 8 0.6688492 58 5 0.5664530 106 8 0.4958696 92 7 0.6017857 54 4 0.5446429 55 5 0.5000000 7 0 0.7760211 61 3 0.6875000 27 3 0.8153846 47 4 0.8750000 32 2 0.7500000 18 0 0.652155 114 8 0.788889 55 5 0.9226190 54 5 0.8065476 90 5 0.6613757 40 6 0.7519841 23 2 0.625595 66 7 0.6985294 69 3 0.7649573 53 3 0.6580556 40 3 0.5136938 125 8 0.4895833 61 5 0.32222222 97 8 1.0000000 5 0 0.598221 97 7 0.4785714 60 5 0.82804233 71 5 0.8011223 76 5 0.71810481 96 7 0.7538462 37 2 0.8461538 93 8 0.7961364 0.5843537 0.66185617 0.7337968 0.7136673 0.8483547 0.6535446 0.7830860 0.6975881 0.9727891 0.7893991 0.7562358 0.7839326 0.69476486 0.6967930 0.4416910 0.6359203 0.8112984 0.7683498 0.8116170 0.908163 0.6330633 0.709326 0.74648526 0.8911565 0.6977648 0.7701652 0.56573361 0.7363946 0.8439376 0.6907378 0.7409297 0.6854328 0.5697279 0.66099773 7.6423e-01 0.7059766 0.6877551 0.7609329 0.8415791 0.8046715 0.7835588 0.7921059 0 0.7292546 0.7320061 -0.0238614 5 0.6283168 0.693837 -0.0655201 0.9548761 0.2820574 insignificant 1 1.00000 insignificant 0.99513319 0.09771102 insignificant 1.00000 1.00000 insignificant -0.0760071 0.0533636 lowCoverage 1 lowCoverage 0.7297107 0.5955056 0.12630040 7 0.6206469 0.4396392 0.18100763 3.9088e-07 9.9989e-01 weaklyHypermeth 1.2609e-05 1.0000e+00 weaklyHypermeth 1.1691e-02 9.9797e-01 weaklyHypermeth 2.0876e-01 1.0000e+00 insignificant 0.10325322 3.3233e-01 insignificant 1.0000e+00 insignificant 0.7305516 0.8364611 -0.0772470 5 0.6525706 0.8086861 -0.1561155 9.9881e-01 3.2613e-03 weaklyHypometh 1.0000e+00 2.5087e-01 insignificant 9.9935e-01 1.4774e-02 weaklyHypometh 1.0000e+00 9.8067e-01 insignificant -0.11915203 4.2824e-03 weaklyHypometh 0.30259278 insignificant 0.7314815 0.5955056 0.13770617 5 0.657604 0.4396392 0.2179650 8.1165e-06 1.0000e+00 weaklyHypermeth 2.9008e-04 1.0000e+00 weaklyHypermeth 2.0100e-03 9.9999e-01 weaklyHypermeth 5.1538e-02 1.0000e+00 weaklyHypermeth 0.17926034 1.1775e-01 lowCoverage 1.0000e+00 lowCoverage 0.7417840 0.8364611 -0.05463254 5 0.738247 0.8086861 -0.0704389 9.7808e-01 5.1867e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4221e-01 3.0406e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0431449 2.4819e-01 lowCoverage 1.0000000 lowCoverage 0.6064073 0.8351351 -0.19777420 5 0.5495490 0.7847719 -0.23522284 9.9982e-01 1.0902e-06 weaklyHypometh 1.0000e+00 7.4937e-05 weaklyHypometh 9.9998e-01 1.1796e-03 weaklyHypometh 1.00000000 0.0491508 weaklyHypometh -0.22240526 6.4432e-02 insignificant 0.870696 insignificant chr6 37320750 37321750 23744 PIM1 ENSG00000137193 0.7124809 255 5 0.6980802 180 5 0.67966780 127 5 0.7994818 137 5 0.7875000 49 5 0.7426898 322 5 0.7122222 76 5 0.7144048 108 5 0.7497980 110 5 0.7267105 105 5 0.7678184 183 5 0.6978355 59 5 0.7669247 128 5 1.0000000 18 1 0.8172794 98 5 0.8203636 85 5 0.7774359 69 5 0.7320631 150 5 0.8043761 169 5 0.7779403 242 5 0.8395871 75 5 0.7237037 70 5 0.825543 144 5 0.764727 67 5 0.7388889 50 5 0.7393587 206 5 0.7178166 118 5 0.8088852 63 5 0.685455 105 5 0.7074939 227 5 0.6834888 211 5 0.7702705 338 5 0.6229730 95 5 0.6193651 79 5 0.67968750 134 4 0.6341667 59 5 0.745857 80 5 0.5814636 195 5 0.74134846 168 5 0.7837681 198 5 0.75717969 158 5 0.7529423 199 5 0.7021825 158 5 0.7429372 0.7292625 0.66382100 0.8232426 0.8079643 0.7674834 0.7214022 0.7446626 0.7685490 0.7600019 0.7842475 0.7352438 0.7978374 NA 0.8424815 0.8491781 0.8014382 0.7621947 0.8234611 0.7982920 0.853764 0.7451141 0.826789 0.79861120 0.7748052 0.7630709 0.7518734 0.80430813 0.6938947 0.7368990 0.7211438 0.8023554 0.6573003 0.6593042 0.77055860 6.8127e-01 0.7617141 0.5715894 0.7725129 0.8163022 0.7826700 0.7872646 0.7400537 5 0.7887640 0.7682198 0.0070728 5 0.7498506 0.742277 0.0075733 0.5033921 0.7021795 insignificant 1 1.00000 insignificant 0.51870831 0.77256549 insignificant 1.00000 1.00000 insignificant 0.0138188 0.5296057 lowCoverage 1 lowCoverage 0.7887640 0.6635514 0.10597152 5 0.7498506 0.6559691 0.09388147 1.5541e-05 9.7936e-01 weaklyHypermeth 3.1716e-04 1.0000e+00 weaklyHypermeth 3.4117e-04 9.9477e-01 weaklyHypermeth 1.1005e-02 1.0000e+00 weaklyHypermeth 0.11700148 2.0728e-03 lowCoverage 8.2912e-02 lowCoverage 0.7887640 0.8229285 -0.0157053 5 0.7498506 0.7527866 -0.0029360 6.2018e-01 2.0996e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.9508e-01 3.1021e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01676942 4.2472e-01 lowCoverage 1.00000000 lowCoverage 0.7682198 0.6635514 0.09895508 5 0.742277 0.6559691 0.0863081 1.1461e-04 9.6555e-01 weaklyHypermeth 2.7953e-03 1.0000e+00 weaklyHypermeth 2.0767e-03 9.7617e-01 weaklyHypermeth 5.1918e-02 1.0000e+00 weaklyHypermeth 0.10318273 4.7880e-03 lowCoverage 1.4117e-01 lowCoverage 0.7682198 0.8229285 -0.01895941 5 0.742277 0.7527866 -0.0105093 7.3789e-01 2.3787e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.3871e-01 4.0016e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0029507 8.8569e-01 insignificant 1.0000000 insignificant 0.6635514 0.8229285 -0.11613009 5 0.6559691 0.7527866 -0.09681748 9.9711e-01 2.7378e-03 weaklyHypometh 1.0000e+00 5.0701e-02 weaklyHypometh 9.9579e-01 1.1267e-02 weaklyHypometh 1.00000000 0.2488062 insignificant -0.10023207 6.3859e-03 lowCoverage 0.245610 lowCoverage chr6 37713950 37714950 23752 ENSG00000204110 0.7898608 325 9 0.8700154 437 9 0.77507452 364 9 0.9416921 309 8 0.7979717 228 9 0.8873038 402 9 0.8684739 306 9 0.7947207 305 9 0.8262800 326 9 0.9118742 209 9 0.8252945 386 10 0.8387654 135 8 0.8993494 314 9 0.9120515 142 5 0.9011356 373 8 0.8629831 94 7 0.8171717 67 3 0.7394762 323 8 0.9186152 368 8 0.8794294 342 9 0.7931151 112 9 0.7043875 97 7 0.865619 306 9 0.802871 149 8 0.8921595 164 6 0.8664501 487 10 0.7268397 215 9 0.7956328 213 9 0.871544 357 8 0.9063850 501 10 0.9108934 467 9 0.9349840 449 9 0.7319429 296 9 0.7650000 171 8 1.00000000 278 6 0.7348663 99 6 0.867479 283 9 0.9404431 432 9 0.90226105 348 9 0.9514129 263 9 0.90408941 273 8 0.8321282 206 8 0.9060496 283 10 0.8605574 0.8063134 0.74107213 0.9214680 0.8520784 0.8788895 0.8481504 0.8246191 0.8026550 0.9110975 0.8010900 0.8716250 0.9054064 0.88101758 0.8834652 0.8849247 0.8530902 0.8473699 0.8974685 0.8792339 0.760949 0.7093944 0.821330 0.77691847 0.9273498 0.9165514 0.6908404 0.76919912 0.8372384 0.8909631 0.9050400 0.9269855 0.7750296 0.7759224 0.98372986 7.3408e-01 0.8933391 0.9330972 0.9158303 0.9459961 0.8771086 0.8192071 0.9145953 7 0.8644186 0.8669320 -0.0024659 9 0.8550196 0.862913 -0.0078932 0.8522797 0.2793540 insignificant 1 1.00000 insignificant 0.63172044 0.45665861 insignificant 1.00000 1.00000 insignificant 0.0136369 0.5875670 insignificant 1 insignificant 0.8644186 0.8954458 -0.03917851 9 0.8550196 0.8853278 -0.03030817 9.8213e-01 8.6533e-03 weaklyHypometh 1.0000e+00 4.8074e-01 insignificant 4.8509e-01 7.0430e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01292174 7.9762e-01 insignificant 1.0000e+00 insignificant 0.8644186 0.9016752 -0.0356476 9 0.8550196 0.9009283 -0.0459087 9.9036e-01 9.0442e-04 weaklyHypometh 1.0000e+00 9.0442e-02 weaklyHypometh 9.9555e-01 1.0055e-03 weaklyHypometh 1.0000e+00 1.6758e-01 insignificant -0.04631128 7.7493e-02 insignificant 1.00000000 insignificant 0.8669320 0.8954458 -0.03785737 9 0.862913 0.8853278 -0.0224150 9.3975e-01 8.9995e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 5.9779e-01 7.4785e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00071518 9.8922e-01 insignificant 1.0000e+00 insignificant 0.8669320 0.9016752 -0.03340304 9 0.862913 0.9009283 -0.0380155 9.8195e-01 7.8282e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9949e-01 2.2566e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0599482 5.6849e-02 insignificant 1.0000000 insignificant 0.8954458 0.9016752 -0.00029282 9 0.8853278 0.9009283 -0.01560052 1.1553e-01 3.1725e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.8396e-01 1.5078e-01 insignificant 1.00000000 1.0000000 insignificant -0.05923301 2.7926e-01 insignificant 1.000000 insignificant chr6 37780150 37781150 23755 MDGA1 ENSG00000112139 0.0700000 111 4 0.0076923 144 5 0.00000000 151 5 0.0000000 78 5 0.0555556 91 5 0.1633157 192 6 0.0102588 161 5 0.0376812 105 5 0.0277778 140 5 0.0500000 110 5 0.0262500 178 5 0.0244444 149 5 0.0000000 148 4 NA 0 0 0.1708333 184 4 0.0023529 191 5 0.0683761 128 5 0.2000000 56 2 0.0250000 104 5 0.1541353 144 6 0.1180556 72 5 0.0454545 38 2 0.040476 138 6 0.076741 57 5 0.0740741 30 2 0.0000000 169 5 0.0000000 49 2 0.0453373 52 4 0.225397 89 5 0.1666667 166 5 0.0500000 165 5 0.1702742 179 6 0.0231481 131 5 0.0881818 77 5 0.09047619 104 6 0.0833333 41 1 0.100000 40 3 0.0582967 142 5 0.05298507 99 5 0.0000000 104 5 0.03333333 78 2 0.0000000 81 1 0.1904762 97 6 0.0433333 0.0038462 0.00000000 0.0000000 0.0000000 0.0227513 0.0061553 0.0345411 0.0222222 0.0333333 0.0164583 0.0174074 0.0000000 NA 0.0025000 0.0066667 0.0076923 0.0266667 0.0166667 0.0280702 0.050000 0.0363636 0.013333 0.07573421 0.0592593 0.0000000 0.0000000 0.05859127 0.0447619 0.0000000 0.0333333 0.0235931 0.0305556 0.0740909 0.01904762 6.6667e-02 0.0500000 0.0485073 0.0417910 0.0000000 0.0222222 0.0000000 0.0690476 1 0.0175439 0.0357143 -0.0054038 5 0.1070884 0.097166 0.0099228 0.7604135 0.4231365 insignificant 1 1.00000 insignificant 0.71749449 0.40889923 insignificant 1.00000 1.00000 insignificant -0.0268113 0.3024689 lowCoverage 1 lowCoverage 0.0175439 0.0392523 -0.01313150 5 0.1070884 0.0740796 0.03300879 8.7066e-01 1.1878e-02 weaklyHypometh 1.0000e+00 4.9493e-01 insignificant 9.3972e-01 2.9698e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.01634427 3.9802e-01 lowCoverage 1.0000e+00 lowCoverage 0.0175439 0.0326797 -0.0114789 5 0.1070884 0.1197428 -0.0126544 8.7426e-01 6.6158e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 7.1888e-01 6.8790e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00220284 9.5615e-01 lowCoverage 1.00000000 lowCoverage 0.0357143 0.0392523 -0.00638889 5 0.097166 0.0740796 0.0230860 8.7931e-01 2.2044e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6085e-01 2.5471e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01046700 6.6368e-01 lowCoverage 1.0000e+00 lowCoverage 0.0357143 0.0326797 -0.00999491 5 0.097166 0.1197428 -0.0225772 7.6797e-01 3.3667e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.5409e-01 8.5645e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0290141 5.0054e-01 lowCoverage 1.0000000 lowCoverage 0.0392523 0.0326797 -0.00394959 5 0.0740796 0.1197428 -0.04566320 4.3242e-01 5.9993e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.1269e-01 9.7454e-01 insignificant 1.00000000 1.0000000 insignificant 0.01854711 6.3924e-01 lowCoverage 1.000000 lowCoverage chr6 38241150 38242150 23760 ENSG00000218521 0.8495316 312 6 0.8540347 218 6 0.65497475 142 6 0.8800183 308 8 0.9513889 22 2 0.9150718 267 6 0.9606481 49 6 0.8974935 116 6 0.7805258 76 6 0.8833333 100 6 0.8929571 192 6 0.7833333 50 6 0.8810294 171 6 NA 0 0 0.7738095 80 6 1.0000000 24 2 0.7013228 55 6 0.6328666 409 6 0.8528139 77 6 0.9043383 193 6 0.9722222 46 4 0.7489636 142 6 0.904904 184 6 0.823489 69 6 0.8299603 137 6 0.9304436 198 6 0.8999540 126 6 0.8472222 23 1 0.898386 150 6 0.7729274 244 6 0.9010048 251 6 0.9313154 284 6 0.2038466 171 6 0.3478325 136 6 0.66666667 53 2 0.2239583 49 6 0.361948 91 6 0.5990247 211 8 0.85735762 229 8 0.7453983 284 6 0.83823929 249 6 0.5872201 246 6 0.7961577 292 6 0.9366631 0.8522348 0.65123856 0.9131421 0.9510626 0.8893515 0.9552573 0.8864780 0.7794297 0.8743289 0.8856088 0.7939597 0.8774606 NA 0.7742090 1.0000000 0.6904442 0.7352278 0.8206223 0.8519641 0.963087 0.7466970 0.870924 0.80874020 0.8279802 0.9020976 0.8897393 0.83053691 0.8924479 0.8905731 0.8656013 0.8835324 0.1966876 0.3390277 0.82921110 2.1588e-01 0.3879257 0.6466111 0.8050054 0.7155463 0.7852609 0.5907953 0.7361061 1 0.8453464 0.8665586 -0.0240634 6 0.7626470 0.914867 -0.1522197 0.9992618 0.0924827 insignificant 1 1.00000 insignificant 0.99094290 0.39599247 insignificant 1.00000 1.00000 insignificant -0.0270226 0.3775129 insignificant 1 insignificant 0.8456423 0.3769339 0.44719293 6 0.8579778 0.3337051 0.52427275 2.3679e-30 1.0000e+00 hypermethylated 4.7357e-28 1.0000e+00 hypermethylated 2.0517e-09 1.0000e+00 hypermethylated 2.9310e-07 1.0000e+00 hypermethylated 0.44416393 1.7091e-03 weaklyHypermeth 7.4309e-02 weaklyHypermeth 0.8456423 0.7307692 0.1144723 6 0.8579778 0.7868695 0.0711083 2.9571e-06 9.6833e-01 weaklyHypermeth 2.4643e-04 1.0000e+00 weaklyHypermeth 3.1925e-05 9.9847e-01 weaklyHypermeth 3.5473e-03 1.0000e+00 weaklyHypermeth 0.07983549 1.8735e-01 insignificant 1.00000000 insignificant 0.8664143 0.3769339 0.46761483 6 0.904225 0.3337051 0.5705199 1.1867e-26 1.0000e+00 hypermethylated 2.7825e-24 1.0000e+00 hypermethylated 1.9473e-09 1.0000e+00 hypermethylated 9.0189e-07 1.0000e+00 hypermethylated 0.47118656 1.3996e-03 weaklyHypermeth 6.8463e-02 weaklyHypermeth 0.8664143 0.7307692 0.13775115 6 0.904225 0.7868695 0.1173555 7.3433e-09 1.0000e+00 weaklyHypermeth 1.8358e-06 1.0000e+00 weaklyHypermeth 2.2038e-06 1.0000e+00 weaklyHypermeth 9.6621e-04 1.0000e+00 weaklyHypermeth 0.1068581 9.2187e-02 insignificant 1.0000000 insignificant 0.3769339 0.7307692 -0.34914110 6 0.3337051 0.7868695 -0.45316441 1.0000e+00 2.2359e-10 hypomethylated 1.0000e+00 3.7266e-08 hypomethylated 1.0000e+00 1.9986e-04 hypomethylated 1.00000000 0.0135353 hypomethylated -0.36432843 4.1343e-03 weaklyHypometh 0.217275 insignificant chr6 39291950 39292950 23774 C6orf64 ENSG00000112167 0.8945455 107 6 0.8945671 146 6 0.88207071 65 6 0.9592977 166 6 0.7270382 125 6 0.9575894 198 6 0.8998563 133 6 0.9688984 123 6 0.9348485 62 6 0.8333333 24 3 0.8993115 226 6 0.8214286 17 0 0.7607143 53 6 0.7008578 69 6 0.9209402 84 6 0.2500000 12 0 NA 0 0 0.7463742 71 6 0.9340278 82 6 0.9077152 139 6 0.8730159 62 6 0.9583333 54 3 0.834283 133 6 0.645726 62 3 0.9318254 163 6 0.8344017 165 6 0.8216586 93 6 0.6911565 34 6 0.979167 130 6 0.9634801 199 6 0.9364099 216 6 0.9109702 167 6 0.7337607 135 6 0.5519567 114 6 0.39529915 86 3 0.9282051 44 4 0.720563 53 6 0.9296202 213 6 0.98517787 134 6 0.9495859 155 6 0.89208754 124 6 0.9761905 27 3 0.7810571 221 6 0.8898650 0.8890246 0.88790879 0.9591603 0.8075336 0.9596889 0.8982133 0.9704381 0.9331233 0.8217822 0.8812733 0.9480198 0.7584158 0.71841470 0.9166032 0.5555911 NA 0.7908873 0.9331683 0.9023828 0.865158 0.9603960 0.837772 0.51469916 0.9352004 0.9166032 0.8154207 0.79471947 0.9801980 0.9595027 0.9395579 0.9127721 0.7419904 0.5720743 0.39223153 9.2186e-01 0.7273242 0.9281539 0.9859116 0.9497243 0.8875288 0.9773692 0.9100021 0 0.8880126 0.8903924 -0.0059912 6 0.7489681 0.859237 -0.1102691 0.8141314 0.5373251 insignificant 1 1.00000 insignificant 0.95318956 0.34553488 insignificant 1.00000 1.00000 insignificant -0.0285401 0.5617405 lowCoverage 1 lowCoverage 0.8895349 0.7395349 0.15387242 6 0.8871690 0.7640971 0.12307186 4.1830e-04 9.1005e-01 weaklyHypermeth 6.4354e-03 1.0000e+00 weaklyHypermeth 1.3534e-02 9.4147e-01 weaklyHypermeth 2.2940e-01 1.0000e+00 insignificant 0.12659474 2.1818e-01 lowCoverage 1.0000e+00 lowCoverage 0.8890650 0.9349470 -0.0500847 6 0.7604306 0.8024967 -0.0420662 9.9969e-01 1.0307e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9998e-01 1.8769e-02 weaklyHypometh 1.0000e+00 9.8784e-01 insignificant -0.08032427 1.5487e-01 lowCoverage 1.00000000 lowCoverage 0.8915416 0.7395349 0.15368189 6 0.890395 0.7640971 0.1262981 1.8548e-03 8.5451e-01 weaklyHypermeth 2.8298e-02 1.0000e+00 weaklyHypermeth 5.4282e-03 9.4161e-01 weaklyHypermeth 1.0856e-01 1.0000e+00 insignificant 0.15513487 1.3694e-01 insignificant 1.0000e+00 insignificant 0.8916155 0.9349470 -0.04464950 6 0.906053 0.8024967 0.1035564 9.9349e-01 1.8227e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3659e-01 2.0098e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0517841 3.1298e-01 insignificant 1.0000000 insignificant 0.7395349 0.9363636 -0.19945389 6 0.7640971 0.9362462 -0.17214904 9.9677e-01 1.3546e-02 weaklyHypometh 1.0000e+00 2.0687e-01 insignificant 9.9996e-01 1.0330e-03 weaklyHypometh 1.00000000 0.0467889 weaklyHypometh -0.20691901 6.3942e-02 insignificant 0.870696 insignificant chr6 41103150 41104150 23795 LRFN2 ENSG00000156564 0.0093029 633 23 0.0094778 818 23 0.01629184 789 23 0.0575156 505 15 0.0085293 709 23 0.0222799 873 18 0.0157128 1036 23 0.0104007 726 23 0.0514885 923 23 0.0130796 908 23 0.0128322 1108 23 0.0790473 792 23 0.0068342 872 23 0.0047196 286 13 0.0150210 1206 23 0.0166227 806 23 0.0040157 321 19 0.0127321 567 15 0.0035813 755 23 0.0771276 784 22 0.0286013 422 23 0.0083742 493 17 0.058321 523 23 0.041474 403 23 0.0041035 358 13 0.0679709 1118 23 0.0363642 716 23 0.0376035 486 23 0.084272 690 23 0.0065002 1175 23 0.0532092 1046 23 0.0704051 796 17 0.0145274 567 23 0.0274761 572 23 0.00000000 561 17 0.0440391 213 17 0.068699 381 17 0.1110335 906 23 0.05962611 926 22 0.0422961 635 22 0.01252267 491 15 0.0196747 495 17 0.0850481 540 17 0.0079618 0.0138092 0.01961111 0.0187407 0.0113064 0.0290785 0.0187398 0.0110752 0.0117642 0.0121194 0.0182367 0.0076259 0.0092114 0.01125416 0.0109804 0.0183949 0.0024068 0.0166981 0.0029430 0.0114994 0.032889 0.0113554 0.033175 0.02846110 0.0053933 0.0292313 0.0359566 0.03204018 0.0105803 0.0079074 0.0182544 0.0265952 0.0172155 0.0071421 0.00555920 3.0288e-02 0.0241108 0.1438357 0.0191757 0.0259825 0.0168192 0.0206234 0.0481479 15 0.0140105 0.0216413 -0.0068789 23 0.0550626 0.048628 0.0064347 0.9942439 0.1047099 insignificant 1 1.00000 insignificant 0.99712606 0.26035810 insignificant 1.00000 1.00000 insignificant -0.0191026 0.0524423 insignificant 1 insignificant 0.0138862 0.0440625 -0.02882131 23 0.0451244 0.0739916 -0.02886722 9.0145e-01 3.1349e-05 weaklyHypometh 1.0000e+00 3.1349e-03 weaklyHypometh 7.8175e-01 5.5599e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02196524 2.5175e-01 insignificant 1.0000e+00 insignificant 0.0136328 0.0236476 -0.0117315 17 0.0256316 0.0611686 -0.0355370 9.3554e-01 1.7471e-05 weaklyHypometh 1.0000e+00 5.8236e-03 weaklyHypometh 9.6919e-01 3.2299e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.02150291 1.8855e-01 insignificant 1.00000000 insignificant 0.0216545 0.0440625 -0.02277019 23 0.050365 0.0739916 -0.0236270 9.5551e-01 9.1856e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 6.2640e-01 9.7678e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00286263 8.7931e-01 insignificant 1.0000e+00 insignificant 0.0213181 0.0236476 -0.00415060 17 0.042129 0.0611686 -0.0190397 8.2088e-01 2.1815e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.9666e-01 7.5630e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0024003 8.7989e-01 insignificant 1.0000000 insignificant 0.0432195 0.0236476 0.02014822 17 0.0608590 0.0611686 -0.00030959 8.6393e-01 9.8884e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9981e-01 9.4643e-01 insignificant 1.00000000 1.0000000 insignificant 0.00046233 9.8306e-01 insignificant 1.000000 insignificant chr6 41518550 41519550 23797 NCR2 ENSG00000096264 0.0745382 375 18 0.0132775 517 17 0.01933662 728 20 0.0112500 322 17 0.0176312 471 18 0.1486249 538 19 0.0177972 966 19 0.0182557 465 19 0.0128323 717 20 0.0198705 748 19 0.0684461 740 19 0.0285144 741 17 0.0150276 730 20 0.1023256 167 6 0.0209279 839 19 0.0193659 857 17 0.0159695 625 17 0.0191557 433 17 0.0393037 549 19 0.1067363 473 20 0.0086342 207 17 0.0399408 267 6 0.037869 576 17 0.089037 285 17 0.0502306 190 6 0.0191241 808 21 0.0786953 337 17 0.0980192 271 15 0.024911 427 19 0.0116230 801 20 0.0516762 677 21 0.0721956 585 18 0.1302134 553 18 0.1261817 506 19 0.22737166 399 13 0.1941919 141 13 0.225661 175 16 0.0847146 510 18 0.07083655 442 19 0.0437401 428 20 0.01587302 275 10 0.0895053 286 13 0.1179242 306 12 0.0246578 0.0069918 0.01330353 0.0123366 0.0232207 0.0273573 0.0136248 0.0149587 0.0091935 0.0130324 0.0200368 0.0223450 0.0121978 0.01371771 0.0132806 0.0104294 0.0214013 0.0119244 0.0286937 0.0141222 0.015388 0.0135571 0.042971 0.04038511 0.0109373 0.0182983 0.0328423 0.03664872 0.0159150 0.0098137 0.0221694 0.0215031 0.1154543 0.0832777 0.15328501 1.2273e-01 0.1601670 0.0696247 0.0358000 0.0407281 0.0127088 0.0357130 0.0594635 6 0.0272773 0.0326087 -0.0052225 18 0.1585994 0.124321 0.0342785 0.9959975 0.7196257 insignificant 1 1.00000 insignificant 0.82636103 0.97903140 insignificant 1.00000 1.00000 insignificant -0.0090370 0.4722816 insignificant 1 insignificant 0.0270406 0.1985101 -0.16935644 17 0.1080216 0.1249745 -0.01695294 1.0000e+00 1.7658e-28 weaklyHypometh 1.0000e+00 5.8860e-26 weaklyHypometh 9.9988e-01 4.7143e-10 weaklyHypometh 1.0000e+00 1.1786e-07 weaklyHypometh -0.12526308 2.3788e-03 weaklyHypometh 8.7036e-02 weaklyHypometh 0.0267685 0.0362694 -0.0195837 15 0.0590243 0.0704317 -0.0114074 9.9672e-01 1.8928e-03 weaklyHypometh 1.0000e+00 1.7208e-01 insignificant 9.9531e-01 6.0126e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02811650 2.0358e-01 insignificant 1.00000000 insignificant 0.0322700 0.1984231 -0.16554835 17 0.101927 0.1205111 -0.0185844 1.0000e+00 2.1107e-13 weaklyHypometh 1.0000e+00 5.2768e-11 weaklyHypometh 1.0000e+00 1.1679e-05 weaklyHypometh 1.0000e+00 2.9197e-03 weaklyHypometh -0.11622604 3.5167e-03 weaklyHypometh 1.2560e-01 insignificant 0.0323180 0.0362694 -0.01471804 15 0.105026 0.0704317 0.0345940 9.9684e-01 7.2586e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9878e-01 5.9610e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0190795 3.7100e-01 insignificant 1.0000000 insignificant 0.1999117 0.0346220 0.11773164 14 0.1467092 0.0408853 0.10582394 2.6701e-05 9.9925e-01 weaklyHypermeth 5.3401e-03 1.0000e+00 weaklyHypermeth 1.1965e-03 1.0000e+00 weaklyHypermeth 0.23930476 1.0000000 insignificant 0.09714658 1.0676e-02 weaklyHypermeth 0.341683 insignificant chr6 43226950 43227950 23839 ENSG00000223079 0.7780620 754 24 0.6445124 506 28 0.67284756 369 28 0.7594055 506 27 0.6394566 356 25 0.7568679 841 27 0.7215062 505 28 0.6996621 378 25 0.6410066 393 27 0.7968909 459 25 0.7542258 853 27 0.7843777 350 24 0.7656972 473 31 0.7343626 255 19 0.7187466 567 25 0.6667435 311 20 0.7681031 2026 22 0.7499300 478 25 0.6716740 477 20 0.8226854 645 27 0.8329833 248 20 0.8864638 128 9 0.755089 519 25 0.739057 308 27 0.7473061 190 22 0.6979412 624 27 0.6878811 336 25 0.7010337 249 22 0.719972 372 28 0.7689143 576 27 0.7783745 500 27 0.6982192 765 27 0.7220370 569 27 0.6453462 345 27 0.67656191 503 25 0.7089883 219 15 0.556323 366 26 0.7080555 612 27 0.86665627 797 27 0.7272405 804 27 0.79004222 669 26 0.7324228 688 23 0.8201799 789 27 0.8334879 0.7846240 0.75393719 0.8386575 0.7828928 0.8349672 0.8050842 0.7839359 0.7357738 0.8656428 0.8356520 0.8283613 0.8583938 0.78031670 0.8470552 0.7611803 0.8196211 0.8180284 0.7521712 0.9021845 0.851167 0.8524439 0.806585 0.81300157 0.8732098 0.8500726 0.8214610 0.78444958 0.8233463 0.8533936 0.8364733 0.8116586 0.8386560 0.7350084 0.75699302 7.7524e-01 0.7042462 0.8074306 0.8941190 0.8623567 0.8453325 0.8584702 0.8641848 12 0.7725333 0.7972159 -0.0044081 28 0.6824216 0.706550 -0.0241282 0.8823172 0.1517528 insignificant 1 1.00000 insignificant 0.99714778 0.04369067 weaklyHypometh 1.00000 1.00000 insignificant -0.0237647 0.2761065 insignificant 1 insignificant 0.7725494 0.7398623 0.04339806 28 0.6906634 0.6209576 0.06970582 6.9654e-07 9.9958e-01 weaklyHypermeth 1.9348e-05 1.0000e+00 weaklyHypermeth 9.8145e-04 9.9998e-01 weaklyHypermeth 2.7263e-02 1.0000e+00 weaklyHypermeth 0.05778623 7.6674e-02 insignificant 1.0000e+00 insignificant 0.7730645 0.8518815 -0.0377874 27 0.6945424 0.7527547 -0.0582123 9.9970e-01 5.6249e-04 weaklyHypometh 1.0000e+00 6.7851e-02 weaklyHypometh 9.9999e-01 5.3274e-04 weaklyHypometh 1.0000e+00 1.0655e-01 insignificant -0.05997014 8.6895e-02 insignificant 1.00000000 insignificant 0.7975026 0.7399464 0.05033257 28 0.707559 0.6171485 0.0904102 1.9692e-05 1.0000e+00 weaklyHypermeth 6.5639e-04 1.0000e+00 weaklyHypermeth 2.9483e-04 1.0000e+00 weaklyHypermeth 1.2284e-02 1.0000e+00 weaklyHypermeth 0.08155093 2.4345e-02 weaklyHypermeth 5.4936e-01 insignificant 0.7979566 0.8518815 -0.03317984 27 0.715356 0.7527547 -0.0373985 9.8820e-01 5.5543e-03 weaklyHypometh 1.0000e+00 5.0493e-01 insignificant 9.7356e-01 1.0040e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0362054 2.8653e-01 insignificant 1.0000000 insignificant 0.7408829 0.8518815 -0.08125048 27 0.6338435 0.7527547 -0.11891123 1.0000e+00 1.0940e-07 weaklyHypometh 1.0000e+00 1.0687e-05 weaklyHypometh 1.0000e+00 5.4394e-06 weaklyHypometh 1.00000000 0.0013598 weaklyHypometh -0.11775637 1.0912e-02 weaklyHypometh 0.341683 insignificant chr6 43343250 43344250 23844 TTBK1 ENSG00000146216 0.4785656 164 5 0.2698095 168 5 0.41179466 143 5 0.4827586 72 3 0.2804665 94 5 0.4870091 154 5 0.4162847 120 5 0.3067460 115 5 0.3089104 150 5 0.3599123 93 5 0.5409076 177 5 0.3537727 80 5 0.2365702 169 5 0.3333333 12 1 0.2684662 130 5 0.4174908 57 5 0.2217857 104 4 0.3547051 103 5 0.2691908 144 5 0.2519243 180 5 0.6133333 88 5 0.1107143 29 4 0.460870 111 5 0.273203 80 5 0.6201377 184 3 0.2734347 195 5 0.3637082 118 5 0.3547980 43 5 0.351549 123 5 0.2225842 162 5 0.2347052 182 5 0.4895679 196 5 0.6593721 95 5 0.7781613 127 5 0.82778746 235 5 0.7433498 83 5 0.770707 110 5 0.9039555 152 5 0.26490122 168 5 0.3180952 169 5 0.13666667 144 5 0.1600894 152 5 0.4211905 121 5 0.4977278 0.2817984 0.44400333 0.4066415 0.3317112 0.5051796 0.4135462 0.3308859 0.3240312 0.3698125 0.5572019 0.4347395 0.2740845 NA 0.2847693 0.4644182 0.3144916 0.3605272 0.2976295 0.2767803 0.586971 0.1021574 0.480090 0.30235458 0.5865041 0.2835186 0.3816441 0.35466339 0.3622398 0.2195972 0.2179302 0.5194381 0.5870883 0.7605461 0.78080396 6.7805e-01 0.7379890 0.8994981 0.3029185 0.3342881 0.1658206 0.1762139 0.4226190 5 0.3644975 0.3606883 0.0020223 5 0.3456094 0.359452 -0.0138423 0.2686569 0.1260636 insignificant 1 1.00000 insignificant 0.23145612 0.27816690 insignificant 1.00000 1.00000 insignificant -0.0115303 0.8203826 lowCoverage 1 lowCoverage 0.3644975 0.7431421 -0.39345501 5 0.3456094 0.8022152 -0.45660580 9.9999e-01 8.4900e-27 hypomethylated 1.0000e+00 2.1225e-24 hypomethylated 9.9987e-01 1.5155e-10 hypomethylated 1.0000e+00 5.0517e-08 hypomethylated -0.42803533 1.3284e-06 lowCoverage 1.8977e-04 lowCoverage 0.3644975 0.3037135 0.1033260 5 0.3456094 0.2440726 0.1015368 6.3405e-04 9.9531e-01 weaklyHypermeth 3.7297e-02 1.0000e+00 weaklyHypermeth 1.1508e-03 9.8857e-01 weaklyHypermeth 8.8520e-02 1.0000e+00 weaklyHypermeth 0.09233160 1.5801e-01 lowCoverage 1.00000000 lowCoverage 0.3606883 0.7431421 -0.38426421 5 0.359452 0.8022152 -0.4427635 1.0000e+00 1.9191e-18 hypomethylated 1.0000e+00 9.1280e-16 hypomethylated 1.0000e+00 9.1212e-09 hypomethylated 1.0000e+00 4.5606e-06 hypomethylated -0.41650507 1.5818e-06 lowCoverage 3.1636e-04 lowCoverage 0.3606883 0.3037135 0.09353729 5 0.359452 0.2440726 0.1153792 2.1633e-03 9.9487e-01 weaklyHypermeth 9.4056e-02 1.0000e+00 weaklyHypermeth 1.4798e-02 9.8122e-01 weaklyHypermeth 5.5388e-01 1.0000e+00 insignificant 0.1038619 1.6332e-01 lowCoverage 1.0000000 lowCoverage 0.7431421 0.3037135 0.44843472 5 0.8022152 0.2440726 0.55814263 1.0704e-15 1.0000e+00 hypermethylated 5.3521e-13 1.0000e+00 hypermethylated 6.4716e-07 1.0000e+00 hypermethylated 0.00061842 1.0000000 hypermethylated 0.52036692 6.6559e-05 hypermethylated 0.022186 hypermethylated chr6 44312750 44313750 23910 SLC29A1 ENSG00000112759 0.2919048 139 5 0.2438017 140 5 0.16612554 86 7 0.1417679 123 5 0.1628788 96 7 0.2620491 128 5 0.2409683 135 7 0.2002588 105 5 0.2768246 89 5 0.3357143 72 5 0.2550617 156 5 0.1111111 33 2 0.0714286 29 2 0.1666667 31 2 0.2250000 33 2 0.6000000 19 2 NA 0 0 0.2552196 147 6 0.2348485 67 3 0.2172840 84 5 0.4000000 52 5 0.1833333 14 1 0.171366 65 5 0.150000 28 3 0.2318113 187 5 0.3219139 90 5 0.1409897 87 5 0.1969697 23 1 0.319444 39 3 0.2409991 121 5 0.2322638 130 6 0.3144444 115 5 0.1286404 110 5 0.0173797 101 5 0.00000000 63 2 0.0287081 140 3 0.181583 105 5 0.0647226 132 5 0.21652422 149 5 0.2193157 146 7 0.16833333 113 3 0.3311688 50 3 0.1105903 141 7 0.3399189 0.1489362 0.26426499 0.2772886 0.3348646 0.3028461 0.3308511 0.3149476 0.3818315 0.4164134 0.3513002 0.0000000 0.1063830 0.32092199 0.3882979 0.4644051 NA 0.1993158 0.2021277 0.2901497 0.249240 0.2480605 0.344949 0.24042553 0.2936411 0.3540873 0.3487296 0.26241135 0.4175532 0.3152454 0.2852524 0.4229787 0.0289062 0.0183184 0.04775548 7.7619e-02 0.0519989 0.1009957 0.2111293 0.2716157 0.1507092 0.2978723 0.2199468 0 0.2552941 0.2829989 -0.0387961 5 0.2732663 0.264286 0.0089801 0.9924570 0.7123736 insignificant 1 1.00000 insignificant 0.98478612 0.93701078 insignificant 1.00000 1.00000 insignificant -0.0072816 0.8336155 lowCoverage 1 lowCoverage 0.2562278 0.0662558 0.20286592 5 0.2736330 0.0853864 0.18824657 2.4621e-06 1.0000e+00 hypermethylated 6.1553e-05 1.0000e+00 hypermethylated 7.7909e-02 9.9706e-01 insignificant 8.9550e-01 1.0000e+00 insignificant 0.16450735 8.5693e-04 lowCoverage 4.2846e-02 lowCoverage 0.2559242 0.2604341 0.0615819 5 0.2350262 0.2282535 0.0067727 8.8378e-02 9.1431e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.0162e-01 9.8205e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02549321 5.7955e-01 lowCoverage 1.00000000 lowCoverage 0.2841994 0.0679012 0.22564362 5 0.295379 0.1492327 0.1461460 1.3525e-06 1.0000e+00 hypermethylated 6.1475e-05 1.0000e+00 hypermethylated 2.0123e-02 9.9982e-01 weaklyHypermeth 3.2457e-01 1.0000e+00 insignificant 0.17178897 6.8608e-04 lowCoverage 4.5739e-02 lowCoverage 0.2812834 0.2591973 0.10565939 5 0.197960 0.1731288 0.0248311 5.9351e-02 9.9945e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.5845e-01 9.9978e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0327748 4.7116e-01 lowCoverage 1.0000000 lowCoverage 0.0654206 0.2617450 -0.20349678 5 0.0797658 0.2633694 -0.18360363 9.9979e-01 2.0084e-02 weaklyHypometh 1.0000e+00 2.9029e-01 insignificant 9.9982e-01 2.7856e-01 insignificant 1.00000000 1.0000000 insignificant -0.13901414 1.7151e-02 lowCoverage 0.389802 lowCoverage chr6 44551250 44552250 23914 CDC5L ENSG00000096401 0.1062500 37 3 0.0568182 110 5 0.04545455 90 8 0.2727273 34 2 0.0833333 93 5 0.0934343 71 4 0.1222222 90 8 0.1071429 112 8 0.0666667 38 4 0.0000000 47 4 0.1212932 209 8 0.1328125 81 4 0.0666667 107 4 0.7500000 3 0 0.1967593 105 4 0.0000000 64 4 0.0000000 17 1 0.1666667 25 1 0.0927579 121 5 0.1093750 53 5 0.0833333 58 5 0.1250000 26 1 0.139706 93 8 0.125000 64 7 0.1314516 224 5 0.0728114 187 8 0.1250000 51 5 0.1250000 39 3 0.164493 87 5 0.0746187 95 5 0.1160714 124 8 0.0989011 63 5 0.0453125 111 8 0.0243056 123 7 0.12500000 140 8 0.0876838 197 5 0.061905 47 3 0.1000000 68 8 0.07638889 29 1 0.0416667 32 1 0.21000000 31 1 0.2407407 26 1 0.1448413 32 1 0.3355263 0.1794258 0.14354067 0.3540670 0.2631579 0.3319378 0.3421053 0.3383459 0.1315789 0.2772964 0.3679660 0.4194079 0.1315789 NA 0.4239766 0.2772964 0.2772964 0.3947368 0.2863409 0.3453947 0.263158 0.2968008 0.397833 0.39473684 0.2485629 0.2586722 0.3947368 0.39473684 0.2939550 0.2343911 0.3007519 0.2941006 0.1200658 0.0767544 0.39473684 2.6703e-01 0.1127820 0.3157895 0.2412281 0.1315789 0.3562500 0.2850877 0.3430451 0 0.1201062 0.1422142 0.0111407 5 0.1334716 0.077255 0.0562169 0.7560111 0.1876693 insignificant 1 1.00000 insignificant 0.95511328 0.39099934 insignificant 1.00000 1.00000 insignificant 0.0144035 0.6989013 lowCoverage 1 lowCoverage 0.1201062 0.1049563 0.05105183 5 0.1334716 0.0870770 0.04639456 2.1114e-01 9.9884e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.9677e-01 9.9821e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.05548459 1.6717e-01 lowCoverage 1.0000e+00 lowCoverage 0.1198402 0.4133333 0.0437932 1 0.1043395 0.0934066 0.0109329 5.2572e-01 9.2146e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 6.4006e-01 9.9653e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.01320848 8.0435e-01 lowCoverage 1.00000000 lowCoverage 0.1422142 0.1049563 0.04326032 8 0.077255 0.0870770 -0.0098223 1.0517e-01 8.3771e-01 insignificant 8.7641e-01 1.0000e+00 insignificant 3.5987e-01 9.8658e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.04108108 4.3861e-02 weaklyHypermeth 7.8324e-01 insignificant 0.1425993 0.4133333 0.00868461 1 0.096568 0.0934066 0.0031618 3.7646e-01 8.7290e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 3.3879e-01 9.9704e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0276120 5.1236e-01 lowCoverage 1.0000000 lowCoverage 0.1041056 0.4133333 -0.10614454 1 0.0671796 0.0934066 -0.02622697 9.1009e-01 9.1109e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.9366e-01 9.7837e-01 lowCoverage 1.00000000 1.0000000 lowCoverage -0.06869307 1.5031e-01 lowCoverage 1.000000 lowCoverage chr6 47497150 47498150 23937 TNFRSF21 ENSG00000146072 0.7817992 228 6 0.9147936 434 6 0.95952381 141 6 0.9649123 226 6 0.9008547 97 6 0.9352413 364 6 0.8784345 243 6 0.9566284 253 6 0.9296180 105 6 0.9665831 122 6 0.9256576 426 6 0.9107143 78 6 0.9716338 176 6 0.9524943 111 6 0.9474472 218 6 0.9404762 54 6 0.5000000 2 0 0.9590156 162 6 0.9736007 199 6 0.9504551 313 6 0.9402320 83 6 0.8000000 9 0 0.899882 158 6 0.982143 48 6 0.5000000 12 1 0.9743978 578 6 0.7207447 111 6 0.8928571 35 1 0.957901 342 6 0.8215932 562 6 0.8423263 580 6 0.9584196 413 6 0.8887538 273 6 0.8854575 144 6 0.60000000 45 5 0.0000000 5 0 0.677033 144 6 0.9375720 510 6 0.96100887 489 6 0.9666246 289 6 0.94977117 138 6 0.9480769 123 6 0.9794275 173 6 0.9222128 0.8997180 0.93734533 0.9751347 0.8650515 0.9264370 0.8658055 0.9611943 0.9113092 0.9501904 0.9189076 0.8776715 0.9670655 0.94124484 0.9381836 0.8847019 0.8143508 0.9569018 0.9691118 0.9478949 0.926636 0.8102286 0.907063 0.98818898 0.7248950 0.9735145 0.9244430 0.95472441 0.9415988 0.9604178 0.9589131 0.9502797 0.8760056 0.8601127 0.65880753 3.0550e-01 0.8362468 0.9413073 0.9546682 0.9687167 0.9551307 0.9512619 0.9765047 1 0.9309211 0.9497951 -0.0185099 6 0.8982503 0.846458 0.0517919 0.8652532 0.0580432 insignificant 1 1.00000 insignificant 0.88099667 0.17017560 insignificant 1.00000 1.00000 insignificant 0.0534528 0.2643925 lowCoverage 1 lowCoverage 0.9311218 0.8873995 0.04531151 6 0.9368476 0.8929596 0.04388801 1.1654e-02 9.9930e-01 weaklyHypermeth 1.3638e-01 1.0000e+00 insignificant 1.1139e-02 9.9982e-01 weaklyHypermeth 2.0627e-01 1.0000e+00 insignificant 0.24619139 1.4871e-01 lowCoverage 1.0000e+00 lowCoverage 0.9311218 0.9587459 -0.0285366 6 0.9368476 0.9626982 -0.0258506 9.9663e-01 5.8693e-03 weaklyHypometh 1.0000e+00 3.2607e-01 insignificant 9.3565e-01 2.3570e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.04998763 5.3286e-02 insignificant 1.00000000 insignificant 0.9507861 0.8866071 0.06440815 6 0.913125 0.7653939 0.1477312 1.2494e-03 9.9993e-01 weaklyHypermeth 2.1177e-02 1.0000e+00 weaklyHypermeth 3.2276e-03 9.9994e-01 weaklyHypermeth 7.3356e-02 1.0000e+00 weaklyHypermeth 0.19273859 2.4549e-01 lowCoverage 1.0000e+00 lowCoverage 0.9510777 0.9587459 -0.00950886 6 0.954201 0.9626982 -0.0084967 8.3161e-01 2.7733e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.8152e-01 3.1186e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.1034404 2.5680e-02 lowCoverage 0.9277085 lowCoverage 0.8873995 0.9587459 -0.07316939 6 0.8929596 0.9626982 -0.06973863 9.9835e-01 1.2542e-03 weaklyHypometh 1.0000e+00 2.8505e-02 weaklyHypometh 9.9960e-01 4.4032e-03 weaklyHypometh 1.00000000 0.1332011 insignificant -0.29617902 9.4334e-02 lowCoverage 1.000000 lowCoverage chr6 49698550 49699550 23941 ENSG00000216998 0.7556387 267 11 0.6614703 255 12 0.62784752 116 11 0.7469710 189 10 0.6795879 158 12 0.7817945 157 11 0.5755434 120 7 0.8206111 220 12 0.5429609 98 8 0.7093750 109 9 0.7532387 381 12 0.7038690 47 5 0.7498012 272 12 0.8067901 96 7 0.7493946 151 12 0.7479853 54 5 0.5739899 51 4 0.8041091 229 7 0.9191041 153 8 0.8488445 126 8 0.8888889 69 6 0.8863636 21 0 0.731858 133 11 0.813474 93 8 0.9157474 125 7 0.8175111 269 12 0.8557644 106 11 0.7666667 19 0 0.764437 206 7 0.8201117 303 12 0.7431449 220 12 0.6577882 142 12 0.7321314 257 12 0.7377070 169 11 0.75404457 159 10 1.0000000 8 0 0.737500 88 10 0.7941600 286 12 0.71243386 158 7 0.7494506 178 8 0.80800315 173 9 0.7813035 144 6 0.7938811 172 8 0.7716718 0.7332254 0.68106451 0.7606728 0.7764215 0.8330129 0.6036473 0.8582170 0.6327929 0.7411890 0.7826688 0.7489763 0.8011720 0.78445329 0.7637460 0.8194571 0.5716351 0.7719443 0.8752801 0.8868445 0.867304 0.9025226 0.758495 0.84297019 0.9056197 0.8357511 0.8688664 0.84771010 0.8086292 0.8596289 0.7799799 0.8205178 0.7289170 0.7682886 0.76865648 9.3799e-01 0.7958599 0.8053582 0.7487716 0.7729599 0.8305867 0.8053493 0.8010556 1 0.7620074 0.8112544 -0.0416986 12 0.7621925 0.794205 -0.0320130 0.9865802 0.0661340 insignificant 1 1.00000 insignificant 0.99896771 0.00792186 weaklyHypometh 1.00000 0.98720 insignificant -0.0772000 0.0179539 weaklyHypometh 1 insignificant 0.7619784 0.7497415 0.01478580 12 0.7495900 0.7481085 0.00148149 1.6506e-01 4.2585e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.0475e-01 2.0640e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.06464414 2.1312e-01 insignificant 1.0000e+00 insignificant 0.7619788 0.7745455 -0.0173094 10 0.6945818 0.7890229 -0.0944410 9.6389e-01 2.9818e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4539e-01 3.4333e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04106809 1.5375e-01 insignificant 1.00000000 insignificant 0.8105882 0.7497415 0.05489120 12 0.725607 0.7481085 -0.0225012 4.1963e-03 9.5639e-01 weaklyHypermeth 5.7429e-02 1.0000e+00 weaklyHypermeth 7.2871e-02 9.8048e-01 insignificant 8.0967e-01 1.0000e+00 insignificant 0.01255582 7.9961e-01 insignificant 1.0000e+00 insignificant 0.8125370 0.7742718 0.02668322 10 0.795898 0.7714414 0.0244566 1.3915e-01 8.0970e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.9678e-02 9.4827e-01 weaklyHypermeth 9.2742e-01 1.0000e+00 insignificant 0.0361319 2.1391e-01 insignificant 1.0000000 insignificant 0.7492130 0.7742718 -0.04113452 10 0.7337467 0.7714414 -0.03769472 8.9286e-01 9.4085e-02 insignificant 1.0000e+00 9.2240e-01 insignificant 7.1445e-01 4.3169e-01 insignificant 1.00000000 1.0000000 insignificant 0.02357605 6.2389e-01 insignificant 1.000000 insignificant chr6 53332150 53333150 23990 ENSG00000219863 0.0312500 196 6 0.0000000 91 6 0.00446429 165 7 0.0476190 147 4 0.0084034 121 7 0.1787433 233 6 0.0043103 155 7 0.0000000 141 7 0.0097854 228 7 0.0000000 247 7 0.0119048 85 7 0.0000000 167 7 0.0228456 159 7 0.0000000 116 7 0.0024038 215 7 0.0158730 132 7 0.0062500 95 6 0.0032468 194 6 0.0000000 65 4 0.0094551 180 6 0.1025641 62 4 0.0313632 216 7 0.000000 126 7 0.070833 76 6 0.1711491 109 6 0.1298077 150 7 0.0797619 158 6 0.1358696 147 7 0.025000 87 4 0.0119048 181 6 0.0054945 152 7 0.0238095 240 7 0.0234069 161 7 0.1250000 66 4 0.00000000 10 1 0.1250000 47 4 0.081668 88 6 0.0109890 112 7 0.15297619 348 5 0.0625000 185 4 0.08660131 210 4 0.0714286 172 4 0.0385101 237 5 0.0091362 0.0000000 0.00737126 0.0121816 0.0021497 0.0193366 0.0081338 0.0000000 0.0073912 0.0000000 0.0030454 0.0000000 0.0239794 0.00000000 0.0045362 0.0040605 0.0116279 0.0053609 0.0027790 0.0078755 0.060653 0.0101804 0.000000 0.00243632 0.0299878 0.0090723 0.0050467 0.00317781 0.0465116 0.0030454 0.0014056 0.0060908 0.0311214 0.0000000 0.00595358 0.0000e+00 0.0159085 0.0028111 0.0129252 0.0182724 0.0228975 0.0182724 0.0226701 4 0.0089400 0.0176056 -0.0059949 6 0.0232297 0.073724 -0.0504943 0.9511265 0.1004359 insignificant 1 1.00000 insignificant 0.95746485 0.08198901 insignificant 1.00000 1.00000 insignificant -0.0478021 0.0219940 weaklyHypometh 1 insignificant 0.0089400 0.0247934 -0.01250896 6 0.0232297 0.1458883 -0.12265865 8.9706e-01 1.8689e-03 weaklyHypometh 1.0000e+00 1.6990e-01 insignificant 8.8188e-01 6.1919e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04318297 1.2979e-01 lowCoverage 1.0000e+00 lowCoverage 0.0089400 0.0112847 -0.0088421 4 0.0232297 0.1046959 -0.0814662 9.6701e-01 7.5063e-03 lowCoverage 1.0000e+00 3.6441e-01 lowCoverage 9.7280e-01 2.0247e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.06457548 2.3654e-02 lowCoverage 0.78845697 lowCoverage 0.0176056 0.0247934 -0.00543406 6 0.073724 0.1458883 -0.0721643 9.0820e-01 3.7661e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.1856e-01 6.3504e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00461909 8.7523e-01 lowCoverage 1.0000e+00 lowCoverage 0.0176056 0.0112847 -0.00500632 4 0.073724 0.1046959 -0.0309719 7.3238e-01 6.9937e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.0801e-01 1.2426e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0167734 5.2626e-01 lowCoverage 1.0000000 lowCoverage 0.0247934 0.0112847 -0.00582854 4 0.1458883 0.1046959 0.04119246 3.8481e-01 2.5294e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.2909e-01 3.0724e-01 lowCoverage 1.00000000 1.0000000 lowCoverage -0.02139251 4.9718e-01 lowCoverage 1.000000 lowCoverage chr6 80543650 80544650 24041 SH3BGRL2 ENSG00000198478 0.039378 451 11 0.0677646 464 11 0.1364027 407 13 0.0128916 364 6 0.023066 420 13 0.19299 515 11 0.0520865 577 13 0.027680 420 11 0.089734 539 11 0.094505 502 11 0.019522 451 11 0.0959523 561 11 0.0131340 466 11 0.0307765 112 5 0.0209399 529 11 0.0195303 449 11 0.0044265 546 11 0.015356 501 8 0.0090073 267 11 0.127326 439 13 0.0790043 128 11 0.1146991 245 7 0.150441 445 11 0.076098 182 11 0.249209 181 7 0.0776601 541 11 0.0503000 253 11 0.095450 128 11 0.0914775 277 11 0.071366 580 11 0.010402 517 11 0.054582 460 13 0.046439 431 13 0.0168722 351 11 0.222222 79 3 0.11955 73 4 0.02486 193 10 0.0703700 462 11 0.046529 595 10 0.023533 395 11 0.0038353 429 6 0.0167357 469 9 0.172577 449 10 0.057387 0.0309948 0.0478399 0.0282165 0.032488 0.079727 0.0305974 0.0321104 0.0255409 0.0398251 0.034715 0.0174333 0.0240836 0.0321751 0.0428646 0.0195631 0.010442 0.0268086 0.0124822 0.076018 0.102163 0.0799626 0.0635318 0.0891707 0.1231462 0.0138729 0.0731694 0.030455 0.049031 0.014374 0.0250039 0.0760935 0.041000 0.0192365 0.1151038 0.031459 0.068267 0.0593225 0.0367007 0.0387866 0.0066094 0.0155510 0.029366 6 0.036414 0.049022 -0.0095003 11 0.087264 0.089846 -0.0025822 0.652802 1.1212e-01 insignificant 1 1.0000e+00 insignificant 0.627971 1.2695e-01 insignificant 1 1.000000 insignificant -0.0387671 0.077232 insignificant 1 insignificant 0.036414 0.050975 -0.0143033 11 0.087264 0.104849 -0.0175851 5.1262e-01 2.1367e-04 weaklyHypometh 1.0000e+00 5.3417e-02 weaklyHypometh 1.5364e-01 3.0906e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -2.8762e-02 4.2388e-01 insignificant 1.0000e+00 insignificant 0.036414 0.0265297 0.0158658 10 0.087264 0.1298860 -0.04262236 2.7875e-01 2.1625e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.6127e-01 7.8746e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.00198152 9.5422e-01 insignificant 1.00000000 insignificant 0.049022 0.050975 -0.00504729 11 0.089846 0.104849 -0.0150029 7.2163e-01 4.9521e-01 insignificant 1.0000e+00 1.00000000 insignificant 3.3569e-01 9.7066e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.010005 7.8818e-01 insignificant 1.0000e+00 insignificant 0.049022 0.0265297 0.0246539 10 0.089846 0.129886 -0.040040 2.0121e-01 5.9673e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.0263e-01 0.9146538 insignificant 1.0000000 1 insignificant 0.040749 2.8797e-01 insignificant 1.000000 insignificant 0.050975 0.0265297 0.01624003 10 0.104849 0.1298860 -0.0250373 1.7230e-01 8.4579e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.5124e-01 6.8607e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.0307433 5.0357e-01 insignificant 1.00000000 insignificant chr6 106141850 106142850 24165 PREP ENSG00000085377 0.888813 172 5 0.5266667 91 5 0.7098214 34 4 0.9784722 149 5 1.000000 2 0 0.90766 161 5 1.0000000 4 0 0.751838 68 4 0.900000 9 0 0.971429 21 1 0.851175 157 8 0.5833333 7 0 0.8095238 51 4 0.9666667 19 1 0.4666667 13 0 0.0000000 1 0 NA 0 0 0.701170 247 4 0.9354225 97 5 0.958681 117 5 0.7500000 48 4 0.8000000 17 0 0.919608 72 4 0.900000 12 0 0.582881 89 5 0.9456976 84 5 0.9166667 24 3 0.416667 12 1 0.7127379 110 5 0.839120 103 4 0.952279 179 5 0.943939 137 5 0.011905 156 5 0.1827938 119 4 0.000000 84 4 0.00000 22 1 0.20141 110 4 0.0016892 317 5 0.897954 56 5 0.920093 161 5 0.9865953 167 5 0.8611111 36 4 0.757139 132 5 0.901807 0.6477273 0.4123377 0.9857955 NA 0.920109 0.8657179 0.8746658 0.8636364 0.9454545 0.916332 0.4090909 0.9128788 0.9545455 0.3333333 NA NA 0.6218083 0.9569196 0.934071 0.750000 1.0000000 0.9010695 0.8863636 0.8160021 0.9112174 0.8636364 0.136364 0.913655 0.989899 0.9143597 0.9590220 0.021465 0.0682378 0.0000000 0.000000 0.201653 0.0030713 0.9583598 0.9558076 0.9806386 0.8636364 0.927312 0 0.842291 0.902825 -0.0599389 4 0.747887 0.681904 0.0659827 1.000000 6.1258e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.838181 9.4989e-01 lowCoverage 1 1.000000 lowCoverage -0.0220364 0.771466 lowCoverage 1 lowCoverage 0.841584 0.042079 0.7991313 4 0.656978 0.041587 0.6153910 1.9865e-42 1.0000e+00 lowCoverage 9.9327e-40 1.0000e+00 lowCoverage 3.6893e-13 1.0000e+00 lowCoverage 3.6893e-10 1.0000e+00 lowCoverage 7.1830e-01 9.4786e-10 lowCoverage 3.1595e-07 lowCoverage 0.844571 0.9346642 -0.0992661 4 0.802973 0.8450776 -0.04210468 9.9973e-01 2.6775e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.9301e-01 5.5099e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage -0.09998183 1.6213e-01 lowCoverage 1.00000000 lowCoverage 0.902715 0.042131 0.86025445 4 0.650095 0.045745 0.6043492 3.4708e-47 1.0000e+00 lowCoverage 3.4708e-44 1.00000000 lowCoverage 4.6984e-10 1.0000e+00 lowCoverage 3.2094e-07 1.00000000 lowCoverage 0.740333 4.0321e-09 lowCoverage 2.0160e-06 lowCoverage 0.901695 0.9329710 -0.0382371 4 0.650095 0.760570 -0.110475 9.9976e-01 8.3861e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.9805e-01 0.7543561 lowCoverage 1.0000000 1 lowCoverage -0.077945 2.2471e-01 lowCoverage 1.000000 lowCoverage 0.042184 0.9346642 -0.89953957 5 0.050828 0.8450776 -0.7942493 1.0000e+00 2.9951e-32 hypomethylated 1.0000e+00 2.9951e-29 hypomethylated 1.0000e+00 7.1938e-08 hypomethylated 1.0000000 7.1938e-05 hypomethylated -0.8182781 1.2541e-07 lowCoverage 0.00012541 lowCoverage chr6 109159450 109160450 24249 ENSG00000217466 0.825967 210 5 0.4510398 312 5 0.7274544 214 5 0.6553638 133 7 0.601543 88 5 0.72481 199 5 0.6526168 254 7 0.599877 200 5 0.749750 197 4 0.748313 127 4 0.744083 302 7 0.5940163 121 4 0.3480653 204 4 1.0000000 2 0 0.8391069 157 4 0.3800000 46 4 0.5022727 108 4 0.574619 82 5 0.5536732 139 5 0.700879 207 5 0.8194187 68 4 0.6333333 24 2 0.778261 152 5 0.792521 75 5 0.743579 34 4 0.8407178 334 6 0.5051893 47 4 0.457363 52 4 0.4576965 200 5 0.839130 376 7 0.616325 322 6 0.695895 258 5 0.862623 246 5 0.9500651 144 5 1.000000 131 5 0.75278 32 3 0.84328 128 7 0.7984188 337 7 0.744139 198 6 0.651925 196 7 0.6737845 143 5 0.6651848 109 4 0.576629 157 7 0.772343 0.5551412 0.6846117 0.7617502 0.566518 0.841756 0.6575267 0.6366091 0.6001710 0.7379907 0.703154 0.6267210 0.4288636 0.7589328 0.8012512 0.3674685 0.497848 0.6450359 0.5689608 0.656240 0.766105 0.6761168 0.7913716 0.7845052 0.6210195 0.8271537 0.6724035 0.549711 0.487175 0.842159 0.7499319 0.6563280 0.938877 0.9635572 1.0000000 0.882446 0.989621 0.7685214 0.6904565 0.5578558 0.5926207 0.7030314 0.522449 4 0.643549 0.729145 -0.0804213 5 0.646967 0.722845 -0.0758780 0.998123 2.7392e-03 weaklyHypometh 1 5.9297e-01 insignificant 0.984111 7.7008e-02 insignificant 1 1.000000 insignificant -0.0329468 0.554786 lowCoverage 1 lowCoverage 0.643549 0.871190 -0.2299092 5 0.646967 0.883000 -0.2360333 1.0000e+00 1.1639e-11 hypomethylated 1.0000e+00 1.1639e-08 hypomethylated 1.0000e+00 1.2616e-09 hypomethylated 1.0000e+00 1.2616e-06 hypomethylated -2.1919e-01 7.6821e-04 lowCoverage 6.9837e-02 lowCoverage 0.643549 0.6077210 0.0382730 5 0.646967 0.6733478 -0.02638074 4.5170e-02 2.4943e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 2.4972e-01 6.3473e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.01366036 7.6217e-01 lowCoverage 1.00000000 lowCoverage 0.729145 0.871190 -0.15089693 5 0.722845 0.883000 -0.1601553 9.9994e-01 3.6436e-06 weaklyHypometh 1.0000e+00 0.00182181 weaklyHypometh 9.9999e-01 1.8850e-07 weaklyHypometh 1.0000e+00 0.00018850 weaklyHypometh -0.186242 5.0081e-03 lowCoverage 2.6359e-01 lowCoverage 0.729145 0.6077210 0.1133545 5 0.722845 0.673348 0.049497 6.0314e-03 8.7587e-01 weaklyHypermeth 7.5392e-01 1.0000e+00 insignificant 1.5411e-01 0.9530366 insignificant 1.0000000 1 insignificant 0.019286 7.0394e-01 lowCoverage 1.000000 lowCoverage 0.871190 0.6077210 0.27304156 5 0.883000 0.6733478 0.2096525 7.1663e-10 9.9935e-01 hypermethylated 7.1663e-07 1.0000e+00 hypermethylated 2.4341e-06 9.9997e-01 hypermethylated 0.0024341 1.0000e+00 hypermethylated 0.2055286 1.8366e-03 weaklyHypermeth 0.16696038 insignificant chr6 117976150 117977150 24375 DCBLD1 ENSG00000164465 0.905992 176 5 0.6866667 52 4 0.5642857 36 5 0.8785714 116 5 0.500000 21 3 0.70934 166 5 0.1757576 59 5 0.374339 41 5 0.742857 59 5 0.972381 58 5 0.641120 131 5 0.2888889 24 2 0.3993056 97 5 NA 0 0 0.8636752 56 5 0.5166667 26 3 0.1265803 90 6 0.854285 113 5 0.9266667 35 5 0.987389 115 5 0.9512821 44 3 0.5042389 89 5 0.745111 67 5 0.926667 29 5 0.967949 51 5 0.9777778 80 5 0.8205128 70 5 0.600000 6 0 0.9652778 68 5 0.729167 63 5 0.891270 59 5 0.882789 180 5 0.485083 69 5 0.3381818 94 5 0.000000 108 2 0.17026 87 5 0.25727 40 3 0.0772605 169 5 0.419751 138 5 0.578041 162 5 0.8715583 124 5 0.4872070 87 5 0.832725 162 5 0.911877 0.7418733 0.5891381 0.8880165 0.592287 0.701268 0.1985349 0.4517906 0.7217631 0.9657615 0.660671 0.2956841 0.4876033 NA 0.8794589 0.4896694 0.152948 0.8600491 0.9476584 0.991003 0.942149 0.5158051 0.7298205 0.9157025 0.9769549 0.9839302 0.9809282 0.710744 0.966139 0.872590 0.9145678 0.8870947 0.509829 0.3930629 0.2770561 0.189199 0.305710 0.1098471 0.4490485 0.6966527 0.8663552 0.5237330 0.845201 3 0.701564 0.859801 -0.1547564 5 0.589220 0.718108 -0.1288884 1.000000 1.1020e-03 weaklyHypometh 1 3.6734e-01 insignificant 1.000000 1.5864e-05 weaklyHypometh 1 0.015864 weaklyHypometh -0.1925507 0.018021 lowCoverage 1 lowCoverage 0.701564 0.172840 0.4957455 5 0.589220 0.181283 0.4079363 5.9704e-13 1.0000e+00 hypermethylated 5.9704e-11 1.0000e+00 hypermethylated 1.0483e-06 1.0000e+00 hypermethylated 1.0483e-04 1.0000e+00 hypermethylated 4.1628e-01 7.4872e-04 lowCoverage 6.9837e-02 lowCoverage 0.701564 0.6656761 0.0299534 5 0.589220 0.5666735 0.02254617 6.9863e-01 9.1512e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.3578e-01 9.4011e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.00023702 9.9834e-01 lowCoverage 1.00000000 lowCoverage 0.859801 0.172840 0.63988231 5 0.718108 0.181283 0.5368246 5.7373e-23 1.0000e+00 hypermethylated 9.8739e-21 1.00000000 hypermethylated 2.3403e-09 1.0000e+00 hypermethylated 7.8010e-07 1.00000000 hypermethylated 0.608828 5.3730e-05 lowCoverage 9.4142e-03 lowCoverage 0.859801 0.6656761 0.1805329 5 0.718108 0.566673 0.151435 9.9807e-04 1.0000e+00 weaklyHypermeth 1.9961e-01 1.0000e+00 insignificant 1.2146e-04 1.0000000 weaklyHypermeth 0.0607306 1 weaklyHypermeth 0.192314 1.0709e-01 lowCoverage 1.000000 lowCoverage 0.172840 0.6656761 -0.48173179 5 0.181283 0.5666735 -0.3853901 1.0000e+00 1.3530e-08 hypomethylated 1.0000e+00 1.5033e-06 hypomethylated 1.0000e+00 1.0674e-05 hypomethylated 1.0000000 2.1347e-03 hypomethylated -0.4165142 7.1199e-03 lowCoverage 0.54768086 lowCoverage chr6 119638250 119639250 24402 ENSG00000216316 0.726735 542 18 0.7436071 310 14 0.8159813 190 15 0.7952618 463 18 0.829085 111 11 0.77469 587 18 0.8272822 146 10 0.762965 193 12 0.862206 121 10 0.848698 138 8 0.815679 369 15 0.7576513 93 7 0.7497202 162 12 0.4017857 32 4 0.6497480 217 15 0.6665620 82 6 0.6389344 482 7 0.751280 444 18 0.8001107 236 17 0.818027 438 17 0.6479501 86 7 0.7846481 134 9 0.732001 282 18 0.766915 115 8 0.760000 109 11 0.7991334 396 17 0.6694692 163 11 0.731892 82 6 0.8296081 188 12 0.818880 333 17 0.763957 293 17 0.742367 555 18 0.707830 244 13 0.6687611 181 11 0.744795 372 18 0.83238 75 6 0.73804 158 11 0.7566029 305 15 0.844318 554 18 0.844663 562 18 0.8234466 458 17 0.7717944 339 17 0.833870 468 18 0.837266 0.8260374 0.7793151 0.8446593 0.845645 0.840844 0.7921909 0.7951637 0.8520215 0.8366964 0.806119 0.8058552 0.8313061 0.7428632 0.8814809 0.7231754 0.737318 0.7849709 0.8894444 0.866741 0.761667 0.8650222 0.8484923 0.8543251 0.8768228 0.8523192 0.8213177 0.810656 0.836301 0.822870 0.8141973 0.8073087 0.731946 0.7229466 0.7631363 0.802775 0.749435 0.8099985 0.8946298 0.8666213 0.8412965 0.8588340 0.863433 5 0.823189 0.805921 0.0018897 17 0.712504 0.742526 -0.0300225 0.507592 7.3700e-01 insignificant 1 1.0000e+00 insignificant 0.648427 5.9916e-01 insignificant 1 1.000000 insignificant -0.0021011 0.940747 insignificant 1 insignificant 0.823277 0.751311 0.0600734 15 0.714496 0.735160 -0.0206636 1.1247e-03 9.7709e-01 weaklyHypermeth 4.0168e-02 1.0000e+00 weaklyHypermeth 4.8469e-02 8.9677e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 1.0399e-02 7.5064e-01 insignificant 1.0000e+00 insignificant 0.823430 0.8832423 -0.0395439 17 0.746974 0.7901514 -0.04317783 9.9939e-01 2.2016e-03 weaklyHypometh 1.0000e+00 2.9549e-01 insignificant 9.9342e-01 3.4886e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant -0.07181774 1.3834e-02 weaklyHypometh 0.98811621 insignificant 0.805779 0.751311 0.06202361 15 0.731332 0.735160 -0.0038285 5.1800e-03 9.6430e-01 weaklyHypermeth 1.4389e-01 1.00000000 insignificant 2.8296e-02 9.6187e-01 weaklyHypermeth 8.8425e-01 1.00000000 insignificant 0.012500 6.5682e-01 insignificant 1.0000e+00 insignificant 0.806003 0.8832423 -0.0426938 17 0.741847 0.790151 -0.048305 9.9984e-01 1.1077e-03 weaklyHypometh 1.0000e+00 3.6924e-01 insignificant 9.9859e-01 0.0410483 weaklyHypometh 1.0000000 1 insignificant -0.069717 4.9916e-03 weaklyHypometh 1.000000 insignificant 0.751124 0.8832423 -0.10398997 15 0.723122 0.7901514 -0.0670296 9.9983e-01 2.2017e-07 weaklyHypometh 1.0000e+00 1.6936e-05 weaklyHypometh 9.9709e-01 8.8915e-03 weaklyHypometh 1.0000000 3.8659e-01 insignificant -0.0822167 1.3581e-02 weaklyHypometh 0.79888847 insignificant chr6 125461950 125462950 24464 RNF217 ENSG00000146373 0.073737 310 12 0.0381505 340 10 0.0039516 336 9 0.1515670 202 8 0.101010 205 7 0.29475 321 10 0.0053727 179 9 0.057964 220 5 0.033166 290 5 0.137626 433 5 0.125000 118 5 0.0023474 307 5 0.0097154 236 5 0.0028011 213 5 0.0009009 449 5 0.0095238 348 5 0.0178063 101 5 0.239899 223 7 0.2366357 129 7 0.183999 272 9 0.0060606 58 5 0.0031623 219 6 0.107089 131 9 0.019841 143 5 0.079000 179 7 0.0013774 415 10 0.0620915 202 5 0.052939 162 7 0.0074405 162 7 0.151986 455 10 0.000000 311 9 0.100899 268 10 0.010463 277 10 0.0000000 84 6 0.169935 318 5 0.00000 68 7 0.20690 134 8 0.1580466 324 10 0.071123 452 9 0.170023 243 11 0.0790598 258 10 0.0028736 170 5 0.086112 206 7 0.000000 0.0055802 0.0043212 0.0064069 0.000000 0.032470 0.0165483 0.0167859 0.0140668 0.0030608 0.000000 0.0037714 0.0133522 0.0052504 0.0029781 0.0104942 0.031368 0.0126801 0.0302220 0.057728 0.014692 0.0091728 0.0118483 0.0061216 0.0193901 0.0033391 0.0122433 0.025151 0.017420 0.021820 0.0000000 0.0330870 0.026502 0.0000000 0.0033919 0.000000 0.040969 0.0169655 0.0122433 0.0440674 0.0048052 0.0075993 0.026565 5 0.016277 0.017745 0.0025307 7 0.198561 0.043087 0.1554737 0.461972 9.9762e-01 insignificant 1 1.0000e+00 insignificant 0.567652 9.9968e-01 insignificant 1 1.000000 insignificant 0.0369722 0.158515 insignificant 1 insignificant 0.016173 0.029046 -0.0037270 7 0.212510 0.166458 0.0460514 9.7020e-01 9.8133e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9778e-01 9.9283e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -4.5941e-03 9.2087e-01 insignificant 1.0000e+00 insignificant 0.014484 0.0180587 -0.0034649 7 0.165597 0.1496554 0.01594202 9.9623e-01 7.8793e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9891e-01 9.3336e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.00445774 8.9776e-01 insignificant 1.00000000 insignificant 0.017978 0.028263 -0.00612463 10 0.056200 0.151957 -0.0957561 9.9989e-01 9.9659e-01 insignificant 1.0000e+00 1.00000000 insignificant 9.9999e-01 9.4027e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.041566 3.6172e-01 insignificant 1.0000e+00 insignificant 0.017722 0.0180587 -0.0041886 7 0.071134 0.149655 -0.078521 9.9859e-01 4.2113e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9963e-01 0.4784385 insignificant 1.0000000 1 insignificant -0.032514 3.2287e-01 insignificant 1.000000 insignificant 0.025316 0.0170411 0.00021765 7 0.088929 0.1065364 -0.0176078 9.8169e-01 7.9669e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9886e-01 9.6586e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.0090519 8.5419e-01 insignificant 1.00000000 insignificant chr6 125725850 125726850 24477 HDDC2 ENSG00000111906 0.071488 588 15 0.0064935 376 14 0.0102395 584 14 0.0038392 534 15 0.010432 420 13 0.06428 844 15 0.0019167 458 14 0.039176 376 14 0.061379 470 14 0.073622 558 14 0.075360 459 13 0.0477359 439 14 0.0076592 488 14 0.0000000 285 14 0.1135037 673 14 0.0069444 487 10 0.0026667 90 6 0.118954 525 13 0.0371789 333 15 0.083341 684 15 0.0372549 173 15 0.0000000 318 14 0.062049 291 14 0.096759 222 12 0.074286 233 10 0.0829031 694 15 0.0241767 563 15 0.030997 200 13 0.0938936 391 14 0.062031 942 15 0.055850 507 15 0.065699 650 15 0.035127 263 14 0.0021786 232 10 0.088235 468 13 0.00000 203 6 0.12102 366 14 0.0441176 524 15 0.000625 902 15 0.062018 498 15 0.0019300 637 15 0.0006250 435 12 0.041667 617 15 0.005542 0.0064759 0.0071456 0.0010539 0.010299 0.016897 0.0063324 0.0027051 0.0083874 0.0135700 0.023934 0.0175041 0.0063189 0.0000000 0.0052266 0.0018067 0.011298 0.0053598 0.0060455 0.015328 0.011427 0.0000000 0.0031324 0.0133017 0.0098036 0.0025339 0.0057052 0.017677 0.021507 0.010093 0.0047944 0.0060565 0.028850 0.0046171 0.0000000 0.000000 0.039796 0.0108401 0.0024119 0.0034279 0.0046685 0.0024119 0.015063 9 0.012413 0.012736 0.0018067 15 0.056203 0.048678 0.0075248 0.805763 9.9728e-01 insignificant 1 1.0000e+00 insignificant 0.914937 9.8205e-01 insignificant 1 1.000000 insignificant -0.0153479 0.215898 insignificant 1 insignificant 0.012421 0.013132 0.0031042 15 0.064634 0.096884 -0.0322502 5.1107e-02 6.4300e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.9624e-01 6.8560e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -6.6359e-03 7.6592e-01 insignificant 1.0000e+00 insignificant 0.012431 0.0048575 0.0045785 15 0.064634 0.0083992 0.05623435 4.7976e-02 9.9421e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 2.6232e-01 9.9898e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.02043757 2.2360e-01 insignificant 1.00000000 insignificant 0.012744 0.013132 0.00152794 15 0.055980 0.096884 -0.0409037 2.9788e-01 9.1234e-01 insignificant 1.0000e+00 1.00000000 insignificant 4.3095e-01 8.5786e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.008712 6.9559e-01 insignificant 1.0000e+00 insignificant 0.012952 0.0051797 0.0032591 15 0.100933 0.055618 0.045315 4.5997e-01 9.9534e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.6484e-01 0.9994214 insignificant 1.0000000 1 insignificant 0.035785 4.9690e-02 weaklyHypermeth 1.000000 insignificant 0.012683 0.0048622 0.00471121 15 0.052093 0.0093324 0.0427607 8.3736e-01 9.9659e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8646e-01 9.9940e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.0270735 2.8031e-01 insignificant 1.00000000 insignificant chr6 128930350 128931350 24522 PTPRK ENSG00000152894 0.817506 149 8 0.8141186 77 4 0.6269231 54 4 0.8208929 86 5 0.878205 27 2 0.72773 125 8 0.4916667 32 4 0.817669 64 4 0.826447 49 4 0.842437 43 4 0.899375 112 4 0.8958333 16 2 0.8649892 89 4 NA 0 0 0.7092105 58 4 0.9375000 18 2 0.6822135 706 6 0.745880 77 5 0.6919969 117 7 0.616159 114 8 0.8590909 34 4 0.4146635 31 2 0.673809 99 8 0.972222 25 2 0.750000 12 2 0.6505488 176 8 0.6507937 24 3 0.416667 15 2 0.9218750 81 4 0.769636 155 7 0.668763 172 7 0.629167 160 7 0.837054 62 4 0.6687500 56 4 0.443352 121 6 0.67664 36 2 0.60485 50 4 0.7136061 211 7 0.781180 132 6 0.770098 147 8 0.6592398 118 6 0.5852983 101 6 0.865739 110 5 0.858048 0.8633988 0.8667263 0.9373256 0.790996 0.768578 0.8050388 0.8028501 0.8132641 0.9387336 0.915552 0.8129845 0.8544372 NA 0.8332313 0.8982558 0.857002 0.8529172 0.8722776 0.805225 0.834038 0.7317196 0.8569615 0.9461426 0.7461131 0.8897295 0.7726098 0.748062 0.916424 0.846217 0.8540459 0.8395178 0.782703 0.7485465 0.6485565 0.856738 0.662286 0.8213813 0.8670452 0.8529580 0.8339793 0.8220714 0.906584 2 0.799305 0.814664 -0.0155837 7 0.602335 0.701648 -0.0993125 0.921146 7.0975e-01 insignificant 1 1.0000e+00 insignificant 0.849059 9.7044e-01 insignificant 1 1.000000 insignificant 0.0759367 0.196604 lowCoverage 1 lowCoverage 0.799702 0.731343 0.0617710 7 0.662569 0.636463 0.0261057 1.7844e-02 9.8951e-01 weaklyHypermeth 4.9565e-01 1.0000e+00 insignificant 7.0152e-02 9.8688e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.1667e-01 8.6328e-02 lowCoverage 1.0000e+00 lowCoverage 0.799702 0.8253707 -0.0139270 5 0.662569 0.6441711 0.01839752 6.8259e-01 4.1413e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.2368e-01 4.5598e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.04172866 4.8177e-01 lowCoverage 1.00000000 lowCoverage 0.814475 0.731343 0.07557096 7 0.671812 0.636463 0.0353495 3.6546e-02 9.8266e-01 weaklyHypermeth 8.1213e-01 1.00000000 insignificant 3.5229e-01 9.2770e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.040729 5.8567e-01 lowCoverage 1.0000e+00 lowCoverage 0.813835 0.8256579 -0.0131459 5 0.656193 0.676519 -0.020326 2.3393e-01 4.5994e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7854e-01 0.5464030 insignificant 1.0000000 1 insignificant -0.034208 6.3473e-01 lowCoverage 1.000000 lowCoverage 0.731343 0.8253707 -0.07918382 5 0.636463 0.6441711 -0.0077082 8.1551e-01 3.5626e-02 weaklyHypometh 1.0000e+00 8.2851e-01 insignificant 9.5944e-01 3.8873e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.0749367 3.2787e-01 lowCoverage 1.00000000 lowCoverage chr6 130031750 130032750 24541 ARHGAP18 ENSG00000146376 0.757106 156 9 0.6938463 120 7 0.7433862 45 7 0.7162698 117 7 0.878788 79 8 0.76818 83 8 0.8909091 41 4 0.861222 100 7 0.777403 64 7 0.766053 65 7 0.678512 185 9 0.6454545 37 3 0.8830442 107 7 0.8315972 69 4 0.7754375 69 7 0.8481481 47 5 0.5546616 70 2 0.794563 218 8 0.8611111 27 3 0.822100 80 9 0.8357143 32 4 1.0000000 7 0 0.708155 66 7 0.650000 33 3 0.880117 57 3 0.8627273 79 7 0.9375000 39 3 0.642857 13 0 0.8233333 81 3 0.773064 61 7 0.793056 50 4 0.850479 91 7 0.670578 144 7 0.6562500 62 3 0.652778 37 5 1.00000 3 0 0.69027 90 7 0.6888889 41 7 0.793866 146 9 0.749735 128 9 0.7412698 123 9 0.6817450 88 5 0.810582 151 9 0.792163 0.6994102 0.7261905 0.8239247 0.812903 0.669355 0.8014366 0.8116064 0.7736699 0.8859127 0.788297 0.5241935 0.8818147 0.7799059 0.7414481 0.8467742 0.584409 0.7229740 0.8917146 0.820011 0.808513 0.9964158 0.7645316 0.7701613 0.8249689 0.8118768 0.9018817 0.859319 0.720430 0.800098 0.8035394 0.8113204 0.634315 0.7110215 0.7133950 0.897535 0.609635 0.7483871 0.7905197 0.7648883 0.7624424 0.7021867 0.828418 0 0.767193 0.784893 -0.0211357 7 0.763441 0.847679 -0.0842380 0.992690 1.9659e-01 insignificant 1 1.0000e+00 insignificant 0.999764 4.0865e-02 weaklyHypometh 1 1.000000 insignificant -0.0356938 0.344579 lowCoverage 1 lowCoverage 0.767271 0.663130 0.1059798 5 0.766130 0.622479 0.1436507 1.6842e-05 9.4016e-01 weaklyHypermeth 7.6553e-04 1.0000e+00 weaklyHypermeth 4.5089e-02 9.7632e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 5.0929e-02 4.1581e-01 lowCoverage 1.0000e+00 lowCoverage 0.767561 0.7814465 -0.0044527 8 0.769774 0.7699215 -0.00014790 5.2843e-01 6.6347e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 3.0075e-01 2.7252e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.02194998 4.7914e-01 insignificant 1.00000000 insignificant 0.783471 0.663130 0.13573920 5 0.817215 0.622479 0.1947363 1.0879e-04 9.9971e-01 weaklyHypermeth 4.3516e-03 1.00000000 weaklyHypermeth 4.0749e-03 9.9916e-01 weaklyHypermeth 1.6979e-01 1.00000000 insignificant 0.086623 2.0682e-01 lowCoverage 1.0000e+00 lowCoverage 0.781302 0.7814465 0.0114227 7 0.796906 0.769922 0.026984 2.1996e-01 4.5201e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.0120e-02 0.9264667 weaklyHypermeth 1.0000000 1 insignificant 0.057644 1.5523e-01 lowCoverage 1.000000 lowCoverage 0.666667 0.7814465 -0.10993751 5 0.691643 0.7699215 -0.0782783 9.1756e-01 1.9296e-04 weaklyHypometh 1.0000e+00 9.6481e-03 weaklyHypometh 8.4396e-01 9.7521e-02 insignificant 1.0000000 1.0000e+00 insignificant -0.0289793 6.4215e-01 lowCoverage 1.00000000 lowCoverage chr6 134380450 134381450 24641 TBPL1 ENSG00000028839 0.891331 237 8 0.8662223 304 9 0.7486772 64 9 0.8393993 204 9 0.781968 133 9 0.70617 95 8 0.6634199 116 9 0.850276 124 9 0.705980 101 5 0.766319 116 7 0.779846 232 9 0.8068783 58 4 0.8173764 117 8 0.8085052 78 8 0.8793493 122 8 0.6071429 41 5 0.8354502 468 5 0.744319 310 11 0.9671717 84 8 0.647934 100 8 0.7228395 41 4 0.8611111 41 4 0.746915 112 8 0.845139 73 8 0.854064 134 9 0.6996438 167 6 0.5763889 70 8 0.798990 56 5 0.7635243 107 7 0.798996 193 9 0.798679 171 7 0.801748 109 8 0.596759 129 9 0.8401455 137 8 0.770204 162 9 0.75089 37 4 0.71943 88 9 0.7461769 137 9 0.759609 198 9 0.711201 194 9 0.7911111 226 8 0.9069395 176 8 0.809004 194 9 0.862190 0.8520841 0.7378807 0.8586952 0.815640 0.699407 0.7025955 0.8443550 0.7599452 0.8014425 0.793404 0.8077006 0.8268200 0.7618874 0.8614911 0.8531586 0.835087 0.8701964 0.9557740 0.793898 0.740240 0.9774775 0.7137647 0.7883205 0.8614787 0.8401950 0.8292042 0.837037 0.678704 0.880837 0.7977953 0.8000662 0.650701 0.8205813 0.7734785 0.733719 0.750891 0.8178013 0.8522644 0.8745140 0.8880556 0.9080777 0.808656 4 0.817655 0.810236 0.0061335 8 0.752901 0.769923 -0.0170221 0.343288 6.2215e-01 insignificant 1 1.0000e+00 insignificant 0.396560 8.2461e-01 insignificant 1 1.000000 insignificant 0.0133502 0.665266 insignificant 1 insignificant 0.818798 0.747826 0.0711840 9 0.781970 0.744336 0.0376347 1.1916e-03 9.9217e-01 weaklyHypermeth 4.1091e-02 1.0000e+00 weaklyHypermeth 1.9177e-02 9.7676e-01 weaklyHypermeth 7.6708e-01 1.0000e+00 insignificant 4.8418e-02 2.3772e-01 insignificant 1.0000e+00 insignificant 0.818534 0.8613360 -0.0352031 9 0.777849 0.6910551 0.08679425 8.5523e-02 1.8625e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.3956e-01 3.8206e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.00988622 8.0241e-01 insignificant 1.00000000 insignificant 0.810726 0.747826 0.06158174 8 0.790686 0.744336 0.0463508 1.8592e-02 9.6535e-01 weaklyHypermeth 4.6481e-01 1.00000000 insignificant 7.9308e-02 8.8943e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.035068 4.0032e-01 insignificant 1.0000e+00 insignificant 0.810087 0.8613360 -0.0405007 8 0.752225 0.691055 0.061170 9.3970e-01 3.2589e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8548e-01 0.5763018 insignificant 1.0000000 1 insignificant -0.023236 5.7428e-01 insignificant 1.000000 insignificant 0.747460 0.8622087 -0.10718650 9 0.723030 0.7486431 -0.0256129 9.2642e-01 6.1193e-04 weaklyHypometh 1.0000e+00 2.6606e-02 weaklyHypometh 9.5923e-01 1.1036e-02 weaklyHypometh 1.0000000 4.5985e-01 insignificant -0.0583045 2.3725e-01 insignificant 1.00000000 insignificant chr6 134554350 134555350 24654 SGK1 ENSG00000118515 0.719996 234 11 0.7624794 168 10 0.5150463 88 5 0.7504378 272 10 0.538029 56 6 0.73969 353 11 0.7226410 62 3 0.818557 154 8 0.705112 82 5 0.727106 85 4 0.744610 216 8 0.8224510 55 2 0.7106547 154 9 0.8156545 71 7 0.7984615 91 8 0.5267857 21 1 0.6919892 578 2 0.632016 217 10 0.6973665 125 10 0.750292 268 8 0.7292477 55 6 0.6976190 83 6 0.732239 177 12 0.775549 52 5 0.750546 73 3 0.6958083 359 9 0.8011326 114 6 0.672619 44 4 0.8971561 97 8 0.710959 328 10 0.772564 262 10 0.702575 329 8 0.648052 160 9 0.6275277 129 7 0.557104 145 9 0.63889 26 1 0.59485 143 10 0.6924643 289 10 0.714001 184 10 0.673838 232 10 0.6730436 206 10 0.6728458 109 8 0.786612 260 11 0.846772 0.8307707 0.5964318 0.9037452 0.760598 0.882054 0.8456503 0.8626853 0.8669033 0.8424797 0.810890 0.9192073 0.8801921 0.7653814 0.9174836 0.6421161 0.809743 0.8910977 0.7893570 0.897695 0.869338 0.7794715 0.7984432 0.7208406 0.8758201 0.8426186 0.8723462 0.769148 0.879767 0.898662 0.8695817 0.8761564 0.814691 0.7548780 0.6922554 0.753326 0.801279 0.8769458 0.8637791 0.8657129 0.8851725 0.8919861 0.931424 1 0.819701 0.822605 -0.0155757 10 0.686337 0.647501 0.0388359 0.570448 1.1043e-01 insignificant 1 1.0000e+00 insignificant 0.785653 1.3394e-01 insignificant 1 1.000000 insignificant -0.0353657 0.201658 insignificant 1 insignificant 0.820336 0.769058 0.0381400 10 0.692694 0.619868 0.0728261 1.3262e-03 9.8175e-01 weaklyHypermeth 4.4208e-02 1.0000e+00 weaklyHypermeth 1.5323e-02 9.8895e-01 weaklyHypermeth 6.9651e-01 1.0000e+00 insignificant 8.2988e-02 8.4419e-03 weaklyHypermeth 4.9658e-01 insignificant 0.819701 0.8203835 -0.0267723 10 0.686337 0.6347796 0.05155762 6.9833e-01 1.0024e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.3931e-01 1.7651e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.00540078 8.6080e-01 insignificant 1.00000000 insignificant 0.823679 0.769058 0.05312298 10 0.720168 0.619868 0.1003007 2.0542e-04 9.9770e-01 weaklyHypermeth 7.6082e-03 1.00000000 weaklyHypermeth 1.3184e-03 9.9614e-01 weaklyHypermeth 7.3244e-02 1.00000000 weaklyHypermeth 0.118354 5.3046e-04 weaklyHypermeth 5.3046e-02 weaklyHypermeth 0.822605 0.8203835 -0.0222328 10 0.647501 0.634780 0.012722 8.9402e-01 3.8824e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.9829e-01 0.4795161 insignificant 1.0000000 1 insignificant 0.040767 1.8232e-01 insignificant 1.000000 insignificant 0.769058 0.8231707 -0.07993425 10 0.619868 0.7151653 -0.0952976 9.9995e-01 7.5453e-04 weaklyHypometh 1.0000e+00 3.0181e-02 weaklyHypometh 9.9992e-01 5.9975e-03 weaklyHypometh 1.0000000 2.8560e-01 insignificant -0.0775870 2.7374e-02 weaklyHypometh 1.00000000 insignificant chr6 134858450 134859450 24682 ENSG00000213118 0.857937 626 16 0.8488905 169 11 0.7265332 123 9 0.8508379 563 17 0.814180 56 6 0.83605 469 16 0.7924326 116 8 0.816067 154 9 0.823788 84 7 0.775510 93 6 0.840304 296 17 0.5998366 69 5 0.8799494 99 10 0.5000000 4 0 0.7886364 102 10 0.7986111 51 6 0.7818627 116 8 0.879556 494 16 0.8917006 135 15 0.833345 409 16 0.9296875 72 9 0.8178075 137 10 0.869665 218 15 0.803248 70 7 0.787468 137 9 0.8591280 363 16 0.7784127 96 9 0.858974 41 3 0.8427380 133 8 0.855691 388 16 0.785138 292 16 0.898504 585 16 0.772693 190 10 0.6736533 111 10 0.761506 335 16 0.69309 105 10 0.62892 128 8 0.7993214 350 16 0.853388 611 16 0.896970 604 16 0.9196387 701 16 0.8997003 321 15 0.873871 691 16 0.887460 0.8498857 0.8589330 0.9323676 0.907640 0.875405 0.8289774 0.8539293 0.8800290 0.8460400 0.909658 0.7376835 0.8310833 NA 0.8827147 0.7656701 0.813990 0.8731333 0.9219761 0.850663 0.912997 0.8953203 0.8740043 0.8687306 0.8225987 0.8904959 0.7948187 0.909326 0.824432 0.871243 0.8686376 0.9163937 0.785049 0.7916985 0.8248472 0.758878 0.804846 0.8155388 0.8857025 0.9133032 0.9447671 0.8919702 0.899523 3 0.873076 0.872038 -0.0037979 13 0.828620 0.857000 -0.0283796 0.780881 3.9144e-01 insignificant 1 1.0000e+00 insignificant 0.929561 3.0113e-01 insignificant 1 1.000000 insignificant -0.0437370 0.093628 insignificant 1 insignificant 0.873166 0.665025 0.1947737 12 0.845758 0.745195 0.1005635 5.0266e-09 9.9934e-01 weaklyHypermeth 3.1416e-07 1.0000e+00 weaklyHypermeth 1.1935e-02 9.9982e-01 weaklyHypermeth 6.1217e-01 1.0000e+00 insignificant 7.5272e-02 4.9259e-02 weaklyHypermeth 1.0000e+00 insignificant 0.873076 0.9006148 -0.0251086 15 0.828620 0.8902165 -0.06159644 9.9879e-01 2.0786e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9430e-01 2.0885e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.09191223 9.1175e-04 weaklyHypometh 0.11396847 insignificant 0.872038 0.665296 0.20654731 10 0.857000 0.772438 0.0845612 6.3557e-09 9.9987e-01 hypermethylated 4.8890e-07 1.00000000 hypermethylated 1.2205e-04 9.9986e-01 hypermethylated 8.7178e-03 1.00000000 hypermethylated 0.119009 4.7722e-03 weaklyHypermeth 2.6359e-01 insignificant 0.872038 0.9006148 -0.0197274 13 0.857000 0.890216 -0.033217 9.9619e-01 1.8041e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.2231e-01 0.4913189 insignificant 1.0000000 1 insignificant -0.048175 1.7601e-02 weaklyHypometh 1.000000 insignificant 0.665296 0.9006148 -0.23920442 12 0.772438 0.8902165 -0.1177781 1.0000e+00 8.3239e-08 hypomethylated 1.0000e+00 6.9366e-06 hypomethylated 9.9999e-01 7.4954e-05 hypomethylated 1.0000000 1.0708e-02 hypomethylated -0.1671837 8.7352e-04 weaklyHypometh 0.10919008 insignificant chr6 134893050 134894050 24686 ENSG00000213118 0.657047 346 11 0.5882666 249 11 0.5160819 190 8 0.6994233 197 11 0.726640 92 9 0.62834 403 11 0.6486185 158 11 0.618962 190 11 0.556003 139 10 0.684940 164 11 0.589938 359 11 0.4691001 126 8 0.5974387 180 10 0.5000000 23 4 0.6280032 190 11 0.6455979 108 8 0.5426969 101 8 0.696098 207 11 0.6358369 160 11 0.588029 371 11 0.6038159 55 5 0.7342657 102 8 0.684213 198 11 0.477278 75 7 0.566340 69 5 0.5759156 271 11 0.6347475 77 5 0.623016 48 6 0.5972594 173 11 0.720569 288 11 0.605533 236 11 0.673248 581 11 0.661327 175 11 0.4633899 148 11 0.621706 241 11 0.68525 87 8 0.52316 132 11 0.5574320 258 11 0.661780 314 11 0.682564 347 11 0.6766304 273 11 0.6080683 336 11 0.738882 297 11 0.678872 0.6074244 0.6264098 0.7247029 0.685290 0.648481 0.6653273 0.6465701 0.6095855 0.6783020 0.644053 0.5356597 0.6483917 0.6476553 0.6695540 0.6014065 0.592280 0.6819460 0.6622544 0.700497 0.694488 0.7266098 0.7093082 0.5535062 0.6188215 0.6321181 0.6202652 0.646050 0.651183 0.647931 0.6262724 0.6668601 0.571822 0.4862673 0.5937100 0.672877 0.562035 0.5837501 0.6664063 0.7223695 0.7015820 0.6554400 0.662815 5 0.644068 0.651634 -0.0027846 11 0.625098 0.657477 -0.0323797 0.818721 6.1400e-01 insignificant 1 1.0000e+00 insignificant 0.838217 6.8269e-01 insignificant 1 1.000000 insignificant -0.0138304 0.596985 insignificant 1 insignificant 0.644377 0.590778 0.0587041 11 0.641176 0.659563 -0.0183865 7.3056e-05 9.8506e-01 weaklyHypermeth 2.9223e-03 1.0000e+00 weaklyHypermeth 1.2243e-02 9.6195e-01 weaklyHypermeth 6.1217e-01 1.0000e+00 insignificant 2.5475e-02 5.2589e-01 insignificant 1.0000e+00 insignificant 0.644377 0.6719847 -0.0373674 11 0.641176 0.7330780 -0.09190194 9.9987e-01 3.2590e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9998e-01 1.4536e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant -0.06273186 3.9385e-02 weaklyHypometh 1.00000000 insignificant 0.651913 0.590778 0.06110323 11 0.668726 0.659563 0.0091632 2.2072e-03 9.9879e-01 weaklyHypermeth 6.8975e-02 1.00000000 weaklyHypermeth 5.4672e-02 9.9532e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.039306 3.5904e-01 insignificant 1.0000e+00 insignificant 0.651913 0.6719847 -0.0335572 11 0.668726 0.733078 -0.064352 9.9951e-01 3.6768e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9972e-01 0.0815954 insignificant 1.0000000 1 insignificant -0.048901 1.2332e-01 insignificant 1.000000 insignificant 0.590778 0.6719847 -0.09566338 11 0.659563 0.7330780 -0.0735154 1.0000e+00 1.3376e-04 weaklyHypometh 1.0000e+00 7.8683e-03 weaklyHypometh 1.0000e+00 3.6124e-03 weaklyHypometh 1.0000000 1.9013e-01 insignificant -0.0882072 6.2422e-02 insignificant 1.00000000 insignificant chr6 134893250 134894250 24687 ENSG00000213118 0.657047 346 11 0.5882666 249 11 0.5160819 190 8 0.6994233 197 11 0.726640 92 9 0.62834 403 11 0.6486185 158 11 0.618962 190 11 0.556003 139 10 0.684940 164 11 0.589938 359 11 0.4691001 126 8 0.5974387 180 10 0.5000000 23 4 0.6280032 190 11 0.6455979 108 8 0.5426969 101 8 0.696098 207 11 0.6358369 160 11 0.588029 371 11 0.6038159 55 5 0.7342657 102 8 0.684213 198 11 0.477278 75 7 0.566340 69 5 0.5759156 271 11 0.6347475 77 5 0.623016 48 6 0.5972594 173 11 0.720569 288 11 0.605533 236 11 0.673248 581 11 0.661327 175 11 0.4633899 148 11 0.621706 241 11 0.68525 87 8 0.52316 132 11 0.5574320 258 11 0.661780 314 11 0.682564 347 11 0.6766304 273 11 0.6080683 336 11 0.738882 297 11 0.678872 0.6074244 0.6264098 0.7247029 0.685290 0.648481 0.6653273 0.6465701 0.6095855 0.6783020 0.644053 0.5356597 0.6483917 0.6476553 0.6695540 0.6014065 0.592280 0.6819460 0.6622544 0.700497 0.694488 0.7266098 0.7093082 0.5535062 0.6188215 0.6321181 0.6202652 0.646050 0.651183 0.647931 0.6262724 0.6668601 0.571822 0.4862673 0.5937100 0.672877 0.562035 0.5837501 0.6664063 0.7223695 0.7015820 0.6554400 0.662815 5 0.644068 0.651634 -0.0027846 11 0.625098 0.657477 -0.0323797 0.818721 6.1400e-01 insignificant 1 1.0000e+00 insignificant 0.838217 6.8269e-01 insignificant 1 1.000000 insignificant -0.0138304 0.596985 insignificant 1 insignificant 0.644377 0.590778 0.0587041 11 0.641176 0.659563 -0.0183865 7.3056e-05 9.8506e-01 weaklyHypermeth 2.9223e-03 1.0000e+00 weaklyHypermeth 1.2243e-02 9.6195e-01 weaklyHypermeth 6.1217e-01 1.0000e+00 insignificant 2.5475e-02 5.2589e-01 insignificant 1.0000e+00 insignificant 0.644377 0.6719847 -0.0373674 11 0.641176 0.7330780 -0.09190194 9.9987e-01 3.2590e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9998e-01 1.4536e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant -0.06273186 3.9385e-02 weaklyHypometh 1.00000000 insignificant 0.651913 0.590778 0.06110323 11 0.668726 0.659563 0.0091632 2.2072e-03 9.9879e-01 weaklyHypermeth 6.8975e-02 1.00000000 weaklyHypermeth 5.4672e-02 9.9532e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.039306 3.5904e-01 insignificant 1.0000e+00 insignificant 0.651913 0.6719847 -0.0335572 11 0.668726 0.733078 -0.064352 9.9951e-01 3.6768e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9972e-01 0.0815954 insignificant 1.0000000 1 insignificant -0.048901 1.2332e-01 insignificant 1.000000 insignificant 0.590778 0.6719847 -0.09566338 11 0.659563 0.7330780 -0.0735154 1.0000e+00 1.3376e-04 weaklyHypometh 1.0000e+00 7.8683e-03 weaklyHypometh 1.0000e+00 3.6124e-03 weaklyHypometh 1.0000000 1.9013e-01 insignificant -0.0882072 6.2422e-02 insignificant 1.00000000 insignificant chr6 135623150 135624150 24723 MIR548A2 ENSG00000207689 0.791563 382 6 0.7038354 179 7 0.7444429 146 7 0.9245601 271 7 0.783333 112 7 0.82821 226 7 0.7557157 126 7 0.800284 133 7 0.733669 145 6 0.676371 102 6 0.808533 329 7 0.7212121 51 6 0.8457648 111 6 0.7013889 40 4 0.8610402 156 6 0.9444444 53 3 0.5000000 29 3 0.837209 212 6 0.7601033 135 6 0.808984 221 6 0.7916667 50 6 0.8320707 44 3 0.660779 169 6 0.776643 98 6 0.856734 93 7 0.6264545 190 7 0.9105189 84 7 0.777717 78 6 0.8002331 94 6 0.826475 178 7 0.768304 156 7 0.810574 271 7 0.744882 113 6 0.8598567 127 7 0.793708 252 5 0.73673 61 6 0.78353 102 7 0.6838830 171 7 0.789399 373 7 0.862444 387 7 0.8826675 328 7 0.7977760 260 6 0.850770 473 7 0.848876 0.7165183 0.7456074 0.8890247 0.843537 0.790608 0.7934027 0.8224300 0.7496603 0.8443660 0.811381 0.7604466 0.8402554 0.7216133 0.8726860 0.9353094 0.657094 0.9009508 0.7589358 0.824031 0.807321 0.8373014 0.8168777 0.7812501 0.8535643 0.8056021 0.9030722 0.803375 0.792314 0.839622 0.8251708 0.8831476 0.802792 0.8795108 0.7679365 0.770304 0.934016 0.7030533 0.8528306 0.8848070 0.8710620 0.8634392 0.869611 6 0.806595 0.825249 -0.0032420 7 0.837029 0.733567 0.1034624 0.263322 4.4999e-01 insignificant 1 1.0000e+00 insignificant 0.581309 4.6230e-01 insignificant 1 1.000000 insignificant -0.0099810 0.750677 insignificant 1 insignificant 0.806595 0.783981 -0.0042656 7 0.837029 0.806925 0.0301045 4.1376e-02 3.6329e-01 inconclusive 9.1947e-01 1.0000e+00 insignificant 1.6926e-01 7.7329e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4335e-03 7.7628e-01 insignificant 1.0000e+00 insignificant 0.805951 0.8565146 -0.0491849 7 0.759253 0.8218991 -0.06264566 1.0000e+00 1.4089e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.0000e+00 2.2053e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.06007797 4.9203e-02 weaklyHypometh 1.00000000 insignificant 0.825249 0.783981 0.00424939 7 0.733567 0.806925 -0.0733578 4.1019e-02 1.7555e-01 weaklyHypermeth 8.9172e-01 1.00000000 insignificant 1.7544e-01 6.4847e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.019414 5.6892e-01 insignificant 1.0000e+00 insignificant 0.825249 0.8568282 -0.0437314 7 0.733567 0.868469 -0.134902 9.9903e-01 9.6620e-03 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9686e-01 0.0356034 weaklyHypometh 1.0000000 1 insignificant -0.050097 1.0658e-01 insignificant 1.000000 insignificant 0.783981 0.8568282 -0.04531907 7 0.806925 0.8684688 -0.0615439 9.2236e-01 2.3097e-02 weaklyHypometh 1.0000e+00 5.8162e-01 insignificant 9.5588e-01 9.3589e-02 insignificant 1.0000000 1.0000e+00 insignificant -0.0695115 4.9782e-02 weaklyHypometh 1.00000000 insignificant chr6 135687950 135688950 24732 MIR548A2 ENSG00000207689 0.520099 81 5 0.5422845 134 5 0.6522817 36 4 0.5130590 87 5 0.587500 30 4 0.64292 112 5 0.4566964 40 5 0.736111 88 5 0.508049 45 5 0.411565 22 1 0.666527 144 5 0.5833333 13 0 0.6901099 60 5 0.4459821 46 5 0.4777778 36 5 0.6250000 8 0 0.0000000 1 0 0.437046 97 5 0.5375000 62 5 0.463626 51 5 0.6541667 31 5 1.0000000 4 0 0.509722 49 5 0.591667 32 5 0.641640 34 4 0.6209091 141 5 0.6533333 25 2 0.525000 13 1 0.7596917 66 5 0.672039 128 5 0.482292 115 5 0.636364 69 5 0.524269 96 5 0.4771429 63 5 0.537002 102 5 0.37500 15 1 0.26788 61 5 0.5694170 98 5 0.744444 57 5 0.711971 78 4 0.5763021 70 4 0.7010870 34 1 0.607405 96 5 0.464515 0.5053813 0.5052910 0.4908815 0.612500 0.539704 0.5497024 0.5347222 0.5255682 0.6101190 0.543593 0.7431186 0.6753663 0.6584821 0.5648148 0.6389519 NA 0.5778700 0.6250000 0.461257 0.531944 0.8792192 0.4461806 0.5937500 0.6204936 0.6155303 0.7555556 0.458333 0.681166 0.545849 0.5673611 0.6250000 0.486001 0.4940476 0.4810938 0.432961 0.436182 0.5413167 0.7013889 0.4774030 0.7078125 0.6702899 0.614111 0 0.567704 0.622348 -0.0465172 5 0.504060 0.651839 -0.1477789 0.992906 1.0574e-01 insignificant 1 1.0000e+00 insignificant 0.988676 2.2972e-02 weaklyHypometh 1 1.000000 insignificant -0.1206954 0.029144 lowCoverage 1 lowCoverage 0.567477 0.512644 0.0629208 5 0.503654 0.406305 0.0973489 1.9684e-02 9.9520e-01 weaklyHypermeth 5.0939e-01 1.0000e+00 insignificant 1.1436e-01 9.9400e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.6421e-02 2.7938e-01 lowCoverage 1.0000e+00 lowCoverage 0.568660 0.6567164 -0.0870345 4 0.567067 0.6830688 -0.11600166 9.9399e-01 8.9507e-04 lowCoverage 1.0000e+00 2.2377e-01 lowCoverage 9.8833e-01 4.7208e-03 lowCoverage 1.0000e+00 0.6744007 lowCoverage -0.14336857 8.8006e-03 lowCoverage 0.80005011 lowCoverage 0.622348 0.513825 0.11136492 5 0.651839 0.451450 0.2003887 4.6568e-04 9.9295e-01 weaklyHypermeth 1.6058e-02 1.00000000 weaklyHypermeth 3.0990e-03 9.9726e-01 weaklyHypermeth 1.4757e-01 1.00000000 insignificant 0.187117 1.0192e-02 lowCoverage 5.0958e-01 lowCoverage 0.621813 0.6567164 -0.0355948 4 0.608318 0.683069 -0.074750 9.3813e-01 1.3861e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.3338e-01 0.3874354 lowCoverage 1.0000000 1 lowCoverage -0.022673 6.6254e-01 lowCoverage 1.000000 lowCoverage 0.515012 0.6567164 -0.15485444 4 0.507881 0.6830688 -0.1751877 9.9662e-01 1.3922e-05 lowCoverage 1.0000e+00 9.2816e-04 lowCoverage 9.9631e-01 1.0102e-03 lowCoverage 1.0000000 7.7710e-02 lowCoverage -0.2097899 5.6843e-03 lowCoverage 0.47368948 lowCoverage chr6 136430650 136431650 24747 PDE7B ENSG00000171408 0.716663 405 14 0.6457724 142 9 0.6530040 114 9 0.8232210 282 14 0.672840 66 8 0.79423 491 14 0.7354453 85 9 0.781239 141 8 0.740497 60 8 0.744116 103 8 0.747219 210 9 0.7105820 54 6 0.7933637 73 8 0.7592593 29 2 0.7304561 150 9 0.7261905 45 5 0.5460834 2611 9 0.775558 250 14 0.7345892 223 14 0.803224 356 14 0.8173622 53 5 0.8936723 63 4 0.699513 240 14 0.498094 53 3 0.682837 59 6 0.7786301 356 14 0.7061520 79 5 0.958333 18 1 0.5947995 111 9 0.762302 377 14 0.738966 312 14 0.787646 425 14 0.717204 130 9 0.6965349 111 9 0.773986 374 14 0.68748 108 10 0.69097 41 3 0.7857451 315 14 0.831701 395 14 0.812266 321 14 0.7739549 426 14 0.7328859 419 14 0.798050 408 14 0.819431 0.6775772 0.6777672 0.8584865 0.767033 0.833631 0.7821559 0.8140240 0.7387715 0.7966529 0.832897 0.7779435 0.8391410 0.7987747 0.8084630 0.7470920 0.633921 0.7994368 0.7731192 0.875025 0.783175 0.8840497 0.8447035 0.7529926 0.7910562 0.8607629 0.7882322 0.947966 0.725600 0.782511 0.7787302 0.8314966 0.798585 0.7547212 0.7786041 0.829794 0.810477 0.7948939 0.8909556 0.9262627 0.8603162 0.8186008 0.851326 2 0.706961 0.773066 -0.0344558 14 0.694126 0.734611 -0.0404849 0.834322 1.4465e-02 weaklyHypometh 1 1.0000e+00 insignificant 0.574899 4.0857e-01 insignificant 1 1.000000 insignificant -0.0115146 0.768415 insignificant 1 insignificant 0.706981 0.782206 -0.0350934 14 0.695741 0.782244 -0.0865025 7.2902e-01 2.0791e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 5.0816e-01 6.3490e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.3567e-03 7.8616e-01 insignificant 1.0000e+00 insignificant 0.707122 0.8263078 -0.0920039 14 0.721840 0.8007581 -0.07891780 9.9634e-01 4.4207e-07 weaklyHypometh 1.0000e+00 2.2103e-04 weaklyHypometh 9.8086e-01 7.4379e-03 weaklyHypometh 1.0000e+00 0.7940597 insignificant -0.05809381 2.5295e-02 weaklyHypometh 1.00000000 insignificant 0.772642 0.782206 -0.00054273 14 0.719000 0.782244 -0.0632440 3.9875e-01 3.9464e-01 insignificant 1.0000e+00 1.00000000 insignificant 4.9560e-01 7.5646e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.017871 6.5969e-01 insignificant 1.0000e+00 insignificant 0.772897 0.8263078 -0.0391986 14 0.748200 0.800758 -0.052558 9.9443e-01 6.1514e-03 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9587e-01 0.0260175 weaklyHypometh 1.0000000 1 insignificant -0.046579 2.5673e-01 insignificant 1.000000 insignificant 0.781716 0.8263078 -0.02641239 14 0.775432 0.8007581 -0.0253260 8.4760e-01 1.4457e-02 weaklyHypometh 1.0000e+00 4.1306e-01 insignificant 9.7637e-01 6.2763e-02 insignificant 1.0000000 1.0000e+00 insignificant -0.0644505 2.8243e-02 weaklyHypometh 1.00000000 insignificant chr6 136765150 136766150 24756 ENSG00000220660 0.762832 376 16 0.6476146 202 14 0.6153611 174 9 0.7213733 306 12 0.668446 239 8 0.69870 383 18 0.7526965 170 11 0.751345 169 12 0.741595 154 9 0.722824 189 13 0.651122 397 13 0.5286305 135 7 0.7871015 273 14 0.7367247 81 7 0.6735787 209 9 0.7791098 84 7 0.7548438 487 9 0.739860 393 16 0.7956164 244 12 0.738626 302 16 0.6098521 80 5 0.7154806 70 3 0.661042 348 14 0.652700 97 8 0.868287 70 7 0.6630193 306 17 0.6321537 109 11 0.755971 68 6 0.7381726 158 10 0.731607 292 18 0.711659 256 18 0.713941 494 18 0.632394 259 18 0.7510854 176 11 0.649701 235 16 0.83614 83 7 0.77209 92 8 0.6395582 337 17 0.770396 316 13 0.747666 398 12 0.6603671 246 9 0.7929634 364 10 0.742600 310 11 0.704540 0.6498034 0.6068291 0.7148828 0.689878 0.789073 0.6384423 0.6617917 0.6651873 0.6670501 0.678798 0.5882115 0.7173631 0.7122244 0.7139508 0.6659525 0.710402 0.7718605 0.7566125 0.683373 0.719768 0.7764402 0.6648760 0.7294972 0.7920850 0.6971383 0.7590915 0.646103 0.730990 0.687605 0.7341224 0.7014969 0.684058 0.6709139 0.7586796 0.730680 0.699229 0.6918480 0.7369317 0.7609787 0.7497158 0.7082325 0.741623 7 0.709885 0.729131 -0.0087186 11 0.698291 0.676596 0.0216957 0.577225 1.5251e-01 insignificant 1 1.0000e+00 insignificant 0.288846 3.3605e-01 insignificant 1 1.000000 insignificant 0.0089095 0.721908 insignificant 1 insignificant 0.709885 0.719966 0.0108579 12 0.698291 0.677378 0.0209130 1.0910e-02 2.7087e-01 weaklyHypermeth 3.1171e-01 1.0000e+00 insignificant 1.4186e-01 5.1850e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -9.5608e-05 9.9804e-01 insignificant 1.0000e+00 insignificant 0.709885 0.7356181 -0.0479913 9 0.698291 0.7683410 -0.07004982 9.9949e-01 1.8333e-03 weaklyHypometh 1.0000e+00 2.9549e-01 insignificant 9.9308e-01 7.9406e-03 weaklyHypometh 1.0000e+00 0.7940597 insignificant -0.02939846 3.0609e-01 insignificant 1.00000000 insignificant 0.729131 0.719966 0.01723775 11 0.676596 0.677378 -0.0007827 3.2932e-02 6.8001e-01 weaklyHypermeth 7.6587e-01 1.00000000 insignificant 3.8601e-01 7.2188e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.009005 8.2697e-01 insignificant 1.0000e+00 insignificant 0.729131 0.7356181 -0.0414397 11 0.676596 0.768341 -0.091745 9.9828e-01 1.3381e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9281e-01 0.0732370 insignificant 1.0000000 1 insignificant -0.038308 2.2930e-01 insignificant 1.000000 insignificant 0.719966 0.7356181 -0.05929747 9 0.677378 0.7683410 -0.0909628 9.7067e-01 1.7238e-04 weaklyHypometh 1.0000e+00 9.0724e-03 weaklyHypometh 9.9351e-01 7.1781e-03 weaklyHypometh 1.0000000 3.2628e-01 insignificant -0.0293028 4.9744e-01 insignificant 1.00000000 insignificant chr6 137364050 137365050 24783 ENSG00000207247 0.099232 259 5 0.0586656 340 7 0.1137988 211 5 0.1697222 216 5 0.168080 326 5 0.28308 430 5 0.2236708 307 7 0.165976 209 5 0.020401 251 5 0.379630 159 5 0.162294 302 7 0.0454545 88 4 0.0225616 210 4 0.0723319 174 4 0.0477722 223 5 0.0000000 79 4 NA 0 0 0.193649 323 4 0.0189137 444 5 0.079163 377 5 0.2349451 114 5 NA 0 0 0.195652 210 5 0.052632 91 5 0.277778 11 0 0.1625114 401 7 0.0056771 452 5 0.142857 85 6 0.0625089 450 5 0.108852 798 5 0.032096 534 5 0.065729 403 5 0.272976 243 5 0.1282642 257 5 0.315385 106 4 0.66667 6 0 0.15170 139 5 0.2877010 496 5 0.157875 285 5 0.204045 343 5 0.1188920 184 4 0.3904762 124 4 0.305014 186 5 0.103603 0.0512012 0.1948140 0.1487307 0.059868 0.308333 0.0805440 0.1027055 0.0270559 0.1051780 0.165818 0.0522212 0.0336426 0.1728366 0.0595007 0.0000000 NA 0.1589405 0.0280426 0.075662 0.140722 NA 0.1227804 0.1084994 0.1963323 0.0962050 0.0121539 0.000000 0.079623 0.106562 0.0599611 0.1100770 0.247472 0.1349306 0.1425193 0.417757 0.260355 0.5204843 0.1777527 0.3181159 0.1230441 0.2030205 0.276699 4 0.107346 0.078895 0.0294637 5 0.245478 0.153696 0.0917820 0.015347 9.9989e-01 weaklyHypermeth 1 1.0000e+00 insignificant 0.044645 9.9949e-01 weaklyHypermeth 1 1.000000 insignificant 0.0004058 0.990899 lowCoverage 1 lowCoverage 0.106911 0.303929 -0.1991048 5 0.187913 0.276340 -0.0884267 9.8528e-01 3.2094e-06 weaklyHypometh 1.0000e+00 1.0698e-03 weaklyHypometh 9.9295e-01 8.7046e-03 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -1.8145e-01 7.0431e-02 lowCoverage 1.0000e+00 lowCoverage 0.106547 0.2210339 -0.1148443 5 0.202455 0.3344030 -0.13194778 9.8007e-01 1.1109e-04 weaklyHypometh 1.0000e+00 3.7032e-02 weaklyHypometh 9.9687e-01 6.4832e-04 weaklyHypometh 1.0000e+00 0.2659366 insignificant -0.11292405 8.6292e-02 lowCoverage 1.00000000 lowCoverage 0.078531 0.303929 -0.22632905 5 0.110895 0.276340 -0.1654451 9.9870e-01 2.5471e-07 hypomethylated 1.0000e+00 0.00025471 hypomethylated 9.9987e-01 6.3754e-04 hypomethylated 1.0000e+00 0.31435363 insignificant -0.181852 7.0595e-02 lowCoverage 1.0000e+00 lowCoverage 0.077423 0.2210339 -0.1439327 5 0.042662 0.334403 -0.291741 1.0000e+00 3.2173e-09 weaklyHypometh 1.0000e+00 3.2173e-06 weaklyHypometh 1.0000e+00 0.0010449 weaklyHypometh 1.0000000 1 insignificant -0.113330 8.8203e-02 lowCoverage 1.000000 lowCoverage 0.304418 0.2196429 0.08816584 5 0.310882 0.1680037 0.1428786 4.3099e-01 7.2838e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.3088e-01 9.0383e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.0685222 4.8328e-01 lowCoverage 1.00000000 lowCoverage chr6 143208450 143209450 24899 HIVEP2 ENSG00000010818 0.335769 161 6 0.4411610 161 6 0.5059994 91 6 0.2501998 135 4 0.463534 56 4 0.55407 184 6 0.6152778 76 4 0.247206 123 5 0.324630 140 6 0.488143 106 6 0.613059 105 6 0.2663928 118 6 0.1497531 165 6 0.2390572 29 3 0.2288988 170 6 0.3770370 52 4 0.0855750 121 3 0.261364 139 6 0.2454989 92 6 0.356226 166 6 0.5208333 30 3 0.0108696 138 3 0.543775 70 3 0.439456 77 6 0.154921 70 3 0.3431692 149 6 0.4466779 102 4 0.473737 36 2 0.3294865 98 6 0.412831 271 6 0.236706 117 6 0.668839 131 6 0.009804 97 3 0.2100122 90 6 0.464539 111 3 0.00000 36 3 0.27254 109 6 0.0510893 177 6 0.062814 234 6 0.080449 152 6 0.0243371 193 3 0.1206710 200 6 0.092560 189 6 0.253966 0.2189111 0.3440540 0.2187760 0.136478 0.368060 0.3710911 0.2080400 0.1327972 0.2872257 0.390079 0.2544262 0.1170561 0.2485768 0.1559929 0.3224055 0.110670 0.1282672 0.1029558 0.300475 0.770160 0.0217391 0.5605506 0.4171330 0.2602946 0.2012242 0.2999349 0.413824 0.299836 0.295080 0.0616838 0.5918991 0.015590 0.1553189 0.0411108 0.000000 0.022209 0.0177385 0.0565371 0.0653532 0.0466533 0.0336937 0.051578 3 0.281172 0.328405 -0.0480021 6 0.354320 0.371477 -0.0171574 0.846792 2.1347e-01 insignificant 1 1.0000e+00 insignificant 0.756563 1.1252e-01 insignificant 1 1.000000 insignificant -0.0293324 0.641714 lowCoverage 1 lowCoverage 0.281172 0.169355 0.1685694 6 0.354320 0.213576 0.1407434 1.8140e-07 9.9717e-01 weaklyHypermeth 1.0078e-05 1.0000e+00 weaklyHypermeth 1.7614e-07 1.0000e+00 weaklyHypermeth 2.9357e-05 1.0000e+00 weaklyHypermeth 1.8445e-01 5.8352e-02 lowCoverage 1.0000e+00 lowCoverage 0.281172 0.0578512 0.2194541 6 0.354320 0.0760057 0.27831383 1.8448e-11 1.0000e+00 hypermethylated 1.8448e-08 1.0000e+00 hypermethylated 4.4978e-12 1.0000e+00 hypermethylated 4.4978e-09 1.0000000 hypermethylated 0.27627643 1.5611e-07 hypermethylated 0.00015611 hypermethylated 0.328405 0.169355 0.21388223 6 0.371477 0.213576 0.1579008 1.2390e-04 9.8060e-01 hypermethylated 4.7654e-03 1.00000000 hypermethylated 2.4056e-05 9.9978e-01 hypermethylated 2.0386e-03 1.00000000 hypermethylated 0.213778 4.0988e-02 lowCoverage 1.0000e+00 lowCoverage 0.328405 0.0578512 0.2672960 6 0.371477 0.076006 0.295471 1.0831e-08 1.0000e+00 hypermethylated 5.9216e-06 1.0000e+00 hypermethylated 6.6951e-07 1.0000000 hypermethylated 0.0006695 1 hypermethylated 0.305609 8.9854e-05 lowCoverage 0.044927 lowCoverage 0.169355 0.0578512 0.06465124 6 0.213576 0.0760057 0.1375705 1.3052e-02 2.3202e-02 weaklyHypermeth 1.0000e+00 5.8162e-01 insignificant 4.3776e-01 4.4480e-02 inconclusive 1.0000000 1.0000e+00 insignificant 0.0918310 2.7910e-01 lowCoverage 1.00000000 lowCoverage chr6 144327450 144328450 24923 PLAGL1 ENSG00000118495 0.689744 85 4 0.3898806 265 4 0.4916667 53 5 0.5989583 50 4 0.317000 84 5 0.57112 219 4 0.4177778 70 4 0.571764 102 4 0.443333 49 4 0.542857 43 5 0.481417 298 5 0.3486364 37 5 0.5408994 96 5 0.4369048 30 4 0.5213002 60 5 0.4428571 30 1 0.4285714 8 1 0.855303 71 4 0.4992857 54 5 0.472211 159 4 0.7463786 41 4 0.8869048 25 4 0.576090 58 4 0.301607 133 4 0.781250 24 2 0.7008726 184 4 0.3403431 87 4 0.625000 6 0 0.4607143 39 4 0.796516 362 4 0.838772 185 4 0.523485 160 4 0.508430 161 4 0.7318182 37 5 0.894661 79 3 0.83333 6 0 0.48493 84 5 0.9473128 181 4 0.735714 31 4 0.880952 28 4 0.6666667 22 2 0.7833333 27 1 0.873333 44 4 0.612179 0.2373508 0.3958333 0.5989583 0.156250 0.571124 0.2722222 0.4647048 0.3041667 0.4821429 0.429896 0.2312500 0.4488515 0.2961310 0.4016252 0.3750000 0.289288 0.8191288 0.4241071 0.340264 0.682973 0.8869048 0.4701122 0.3770093 0.7812500 0.6260907 0.3403431 0.625000 0.450893 0.796516 0.7984645 0.5234848 0.508430 0.6875000 0.7796511 0.794472 0.522826 0.9473128 0.6696429 0.8511905 0.5833333 0.7291667 0.841667 0 0.449812 0.643405 -0.2298015 4 0.506416 0.678739 -0.1723227 0.985895 9.0966e-08 lowCoverage 1 9.0966e-05 lowCoverage 0.997737 1.4411e-04 lowCoverage 1 0.072056 lowCoverage -0.1284198 0.055174 lowCoverage 1 lowCoverage 0.449812 0.717153 -0.2812579 5 0.506416 0.730884 -0.2244682 7.6330e-01 7.2434e-09 hypomethylated 1.0000e+00 3.6217e-06 hypomethylated 8.6712e-01 4.6003e-05 hypomethylated 1.0000e+00 1.5334e-02 hypomethylated -2.3034e-01 3.3928e-02 lowCoverage 1.0000e+00 lowCoverage 0.449812 0.7894737 -0.3209484 4 0.506416 0.8106618 -0.30424579 1.0000e+00 2.4703e-11 lowCoverage 1.0000e+00 2.4703e-08 lowCoverage 1.0000e+00 1.6223e-06 lowCoverage 1.0000e+00 0.0016223 lowCoverage -0.28492544 4.0790e-04 lowCoverage 0.08158079 lowCoverage 0.643405 0.717153 -0.06903789 4 0.678739 0.730884 -0.0521455 8.2694e-01 7.1596e-02 lowCoverage 1.0000e+00 1.00000000 lowCoverage 8.3740e-01 2.2834e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage -0.101919 3.2290e-01 lowCoverage 1.0000e+00 lowCoverage 0.643405 0.7894737 -0.1162707 4 0.678739 0.810662 -0.131923 9.9392e-01 2.6621e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.9200e-01 0.0817006 lowCoverage 1.0000000 1 lowCoverage -0.156506 3.9784e-02 lowCoverage 1.000000 lowCoverage 0.717153 0.7894737 -0.06081055 4 0.730884 0.8106618 -0.0797776 8.1950e-01 1.5135e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.4318e-01 1.5753e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage -0.0545863 5.6348e-01 lowCoverage 1.00000000 lowCoverage chr6 144711150 144712150 24934 UTRN ENSG00000152818 0.784692 414 11 0.6555965 146 10 0.7222527 120 10 0.8452255 184 10 0.845885 96 10 0.67944 485 11 0.7586856 185 10 0.805547 143 10 0.658597 84 10 0.652473 99 9 0.812966 258 10 0.7591270 69 7 0.8095799 161 10 0.8571429 20 3 0.8660428 179 10 0.6679012 83 7 0.8031145 61 6 0.753145 246 12 0.7518875 174 10 0.659842 345 11 0.7277778 19 1 0.7086364 89 8 0.677445 214 13 0.749137 103 9 0.868333 60 9 0.7745726 194 11 0.6505266 102 7 0.640725 51 4 0.6018566 138 10 0.757225 339 11 0.787683 222 12 0.873343 448 11 0.781832 145 10 0.6096094 149 10 0.778402 141 9 0.86453 77 7 0.75028 89 6 0.7380309 242 11 0.814333 287 11 0.809048 297 11 0.8384376 259 10 0.8419834 225 8 0.849106 319 10 0.781639 0.7234053 0.7404650 0.8487314 0.835417 0.812766 0.7452328 0.7402620 0.7359689 0.7418192 0.760732 0.8105234 0.7947538 0.7829750 0.8618657 0.7185948 0.802729 0.7850369 0.7896608 0.793130 0.655795 0.7007961 0.7927737 0.7726906 0.8438295 0.8005846 0.6728235 0.690252 0.738570 0.826469 0.7842126 0.8138968 0.733625 0.6630363 0.8015936 0.802227 0.781698 0.7398753 0.8509331 0.8852164 0.8828580 0.8359818 0.795466 3 0.795327 0.797776 0.0053623 10 0.667857 0.702372 -0.0345144 0.721436 4.9283e-01 insignificant 1 1.0000e+00 insignificant 0.535545 7.6554e-01 insignificant 1 1.000000 insignificant 0.0226853 0.452705 insignificant 1 insignificant 0.795551 0.767497 0.0261346 10 0.709598 0.716825 -0.0072271 1.7625e-01 9.4126e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.2758e-01 8.1385e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.6768e-03 9.2511e-01 insignificant 1.0000e+00 insignificant 0.796275 0.8435472 -0.0499596 10 0.728334 0.8386154 -0.11028182 9.9988e-01 6.4873e-03 weaklyHypometh 1.0000e+00 5.8975e-01 insignificant 9.9998e-01 5.4199e-03 weaklyHypometh 1.0000e+00 0.6774921 insignificant -0.07312465 5.9227e-04 weaklyHypometh 0.08460951 weaklyHypometh 0.798179 0.767497 0.02236872 10 0.746270 0.716825 0.0294444 1.1472e-01 8.9144e-01 insignificant 1.0000e+00 1.00000000 insignificant 7.8183e-01 6.7156e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.019008 6.5996e-01 insignificant 1.0000e+00 insignificant 0.798784 0.8435472 -0.0517207 10 0.762688 0.838615 -0.075927 9.9950e-01 2.0461e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9954e-01 0.0061214 weaklyHypometh 1.0000000 1 insignificant -0.095810 2.6173e-03 weaklyHypometh 0.872427 insignificant 0.768133 0.8435472 -0.07792143 10 0.731281 0.8386154 -0.1073348 9.9999e-01 1.1564e-02 weaklyHypometh 1.0000e+00 3.4012e-01 insignificant 9.9987e-01 6.6768e-02 insignificant 1.0000000 1.0000e+00 insignificant -0.0768014 7.3937e-02 insignificant 1.00000000 insignificant chr6 148871950 148872950 25001 ENSG00000215223 0.738076 256 5 0.6993552 233 6 0.4886655 135 6 0.7370233 189 4 0.6953968 59 5 0.803920 231 6 0.833069 94 5 0.6463907 132 6 0.639668 89 5 0.772475 59 6 0.8062808 273 6 0.643269 62 6 0.5158296 180 6 0.36364 12 1 0.597457 125 6 0.725000 38 4 0.674625 418 5 0.3129840 187 5 0.687909 128 6 0.8288845 174 5 0.7642022 58 6 0.2281640 90 3 0.821886 133 5 0.620879 55 4 0.8247263 55 4 0.6890215 252 6 0.6955538 77 6 0.666396 40 4 0.645556 127 6 0.7769406 412 6 0.7415115 251 6 0.766327 257 5 0.0000000 247 6 0.029186 130 6 0.0087719 225 5 0.0000000 24 3 0.022219 162 6 0.00273224 275 6 0.1452669 209 5 0.2455662 246 6 0.3205719 229 4 0.3033032 129 4 0.267911 239 4 0.8560389 0.794622 0.5892709 0.8617354 0.7161056 0.887243 0.879072 0.7735942 0.749244 0.850029 0.837468 0.800261 0.5898691 0.57423 0.682069 0.661624 0.8385494 0.4552932 0.805729 0.8769154 0.908833 0.2535565 0.888944 0.727911 0.7882194 0.7925529 0.7026705 0.729506 0.683951 0.8172940 0.8468697 0.943551 0.0000000 0.0012328 0.01340932 0.0000000 0.011951 0.0041767 0.2454734 0.3604442 0.3885495 0.3652491 0.389348 4 0.766428 0.773105 -7.6382e-03 6 0.595290 0.7617013 -0.16641107 0.94925341 0.32829638 insignificant 1.00000 1.000000 insignificant 0.8840186 0.43980907 insignificant 1 1.00000 insignificant -0.0262680 0.6442717 insignificant 1.00000 insignificant 0.766678 0.0065851 0.7603166 6 0.694505 0.0103913 0.68411392 1.3709e-48 1.0000000 hypermethylated 1.0545e-46 1.00000 hypermethylated 1.4167e-15 1.000000 hypermethylated 9.4446e-14 1 hypermethylated 0.65001082 1.3453e-14 hypermethylated 1.6816e-12 hypermethylated 0.766678 0.358706 0.45717128 5 0.6945052 0.245677 0.4488285 6.5557e-24 1.0000e+00 hypermethylated 3.2778e-21 1.0000e+00 hypermethylated 9.6060e-14 1.0000e+00 hypermethylated 1.9212e-11 1.0000e+00 hypermethylated 0.40397185 2.9940e-07 lowCoverage 0.0001497 lowCoverage 0.772979 0.0065851 7.6744e-01 6 0.721985 0.0103913 0.71159351 3.1733e-42 1.000000 hypermethylated 2.8848e-40 1 hypermethylated 8.8220e-13 1.000000 hypermethylated 5.7345e-11 1 hypermethylated 0.6762788 1.0920e-08 hypermethylated 9.0999e-07 hypermethylated 0.772979 0.3587060 0.45920707 5 0.7219848 0.2456767 0.47630809 4.1059e-23 1.0000e+00 hypermethylated 1.3686e-20 1.0000e+00 hypermethylated 1.0280e-09 1.0000e+00 hypermethylated 2.5700e-07 1.0000000 hypermethylated 0.4302398 1.2669e-06 lowCoverage 0.0012669 lowCoverage 0.0065851 0.3587060 -0.3388389 5 0.0103913 0.2456767 -0.23528541 8.2991e-01 7.3028e-16 hypomethylated 1.0000e+00 3.8436e-14 hypomethylated 0.8712797 2.6710e-06 hypomethylated 1.00000 1.3355e-04 hypomethylated -0.2460390 1.1151e-03 lowCoverage 3.4848e-02 lowCoverage chr6 149720250 149721250 25037 MAP3K7IP2 ENSG00000055208 0.721979 130 5 0.6400088 177 5 0.5650649 103 5 0.6875705 120 5 0.6477273 94 5 0.624181 293 5 0.742632 67 3 0.7025366 111 5 0.625231 89 5 0.678462 65 5 0.6348209 302 5 0.715152 41 3 0.6619201 133 5 0.70769 53 5 0.677217 117 5 0.655556 31 3 0.666667 44 3 0.8013559 95 5 0.802289 157 5 0.6986601 178 5 0.6628788 50 5 0.6231481 71 5 0.758056 123 5 0.682528 107 5 0.5759259 41 5 0.6852069 180 5 0.5766529 96 5 0.652778 28 4 0.770307 134 5 0.8811908 212 5 0.8847972 167 5 0.764127 216 5 0.8187346 132 5 0.618431 78 5 0.6481481 84 5 0.6666667 12 0 0.589436 86 5 0.60610244 130 5 0.6349770 81 5 0.7665149 79 5 0.8426065 88 5 0.6030303 46 5 0.772650 115 5 0.8570948 0.728224 0.5945589 0.8172406 0.6461714 0.729292 0.717181 0.7337299 0.625164 0.663145 0.759400 0.733194 0.8033126 0.70179 0.660760 0.698276 0.7070752 0.7533728 0.797220 0.8291933 0.555077 0.7393678 0.775670 0.795797 0.6672414 0.7921271 0.5631116 0.768199 0.772033 0.8369741 0.8327969 0.787558 0.7505524 0.5889114 0.72249589 0.7302509 0.660669 0.7255675 0.7287689 0.7237365 0.8074209 0.5982236 0.744327 3 0.746667 0.798596 -4.9343e-02 5 0.669603 0.7233209 -0.05371775 0.73967674 0.04395009 weaklyHypometh 1.00000 1.000000 insignificant 0.2505128 0.05037118 insignificant 1 1.00000 insignificant -0.0269635 0.4219678 lowCoverage 1.00000 lowCoverage 0.746667 0.7413793 0.0092315 5 0.669603 0.6611483 0.00845481 3.2711e-02 0.2118863 weaklyHypermeth 2.6812e-01 1.00000 insignificant 2.8788e-01 0.354326 insignificant 1.0000e+00 1 insignificant 0.02491624 5.1840e-01 lowCoverage 1.0000e+00 lowCoverage 0.746667 0.745721 -0.00983919 5 0.6696032 0.696933 -0.0273300 4.8628e-01 2.2229e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.9865e-01 2.3346e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04111962 4.2407e-01 lowCoverage 1.0000000 lowCoverage 0.798596 0.7413793 6.1238e-02 5 0.723321 0.6611483 0.06217256 5.1831e-02 0.873792 insignificant 4.0493e-01 1 insignificant 3.1581e-01 0.622333 insignificant 1.0000e+00 1 insignificant 0.0518798 2.7538e-01 lowCoverage 1.0000e+00 lowCoverage 0.798596 0.7457213 0.02817668 5 0.7233209 0.6969331 0.02638780 1.7874e-01 6.5025e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.1756e-01 4.6301e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0141561 8.0085e-01 lowCoverage 1.0000000 lowCoverage 0.7413793 0.7457213 -0.0419256 5 0.6611483 0.6969331 -0.03578476 6.5249e-01 1.2854e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.9047015 3.5486e-01 insignificant 1.00000 1.0000e+00 insignificant -0.0660359 2.7777e-01 lowCoverage 1.0000e+00 lowCoverage chr6 150092029 150093029 25043 ENSG00000131023 0.680568 81 5 0.5638198 78 5 0.4371212 49 5 0.6577957 91 5 0.4273016 31 5 0.491095 129 5 0.543810 28 5 0.5448529 82 5 0.428235 62 5 0.526032 82 5 0.6019275 155 5 0.500000 16 0 0.4428571 106 5 0.46667 54 5 0.532222 67 5 0.133333 13 0 NA 0 0 0.7299160 78 2 0.560263 75 5 0.5044444 82 5 0.6444444 23 2 0.6190476 19 2 0.590714 61 5 0.370000 22 2 0.6850000 37 2 0.4900963 125 5 0.7125000 31 2 0.530000 31 5 0.480000 54 2 0.4601344 86 5 0.5414835 91 5 0.604365 82 5 0.4873725 97 5 0.541905 44 5 0.5093506 114 5 0.6666667 6 0 0.402857 43 4 0.50732367 75 5 0.6732468 76 5 0.5247368 51 2 0.6369748 54 5 0.5232143 42 2 0.715278 61 5 0.7096310 0.568671 0.4752151 0.7111045 0.4460121 0.560970 0.553204 0.6093863 0.487291 0.646522 0.638100 0.592593 0.5079365 0.54733 0.626680 0.082305 NA 0.7673306 0.628758 0.5632373 0.635117 0.5931805 0.635009 0.346914 0.6966049 0.6487486 0.7391975 0.549383 0.567901 0.5048972 0.5968152 0.622183 0.5097361 0.5549677 0.56503127 0.5830797 0.446384 0.5234687 0.7101170 0.5894087 0.6756925 0.5874118 0.764832 1 0.570272 0.597579 -5.8807e-03 5 0.530026 0.5551154 -0.02508960 0.76146435 0.12550841 insignificant 1.00000 1.000000 insignificant 0.8330686 0.09420754 insignificant 1 1.00000 insignificant -0.0463193 0.2669044 lowCoverage 1.00000 lowCoverage 0.570272 0.5145119 0.0603500 5 0.530026 0.4931342 0.03689165 3.3652e-04 0.2927869 weaklyHypermeth 3.8680e-03 1.00000 weaklyHypermeth 1.0605e-01 0.407711 insignificant 9.4692e-01 1 insignificant -0.00491640 9.1555e-01 lowCoverage 1.0000e+00 lowCoverage 0.570272 0.672535 -0.08338562 5 0.5300258 0.635276 -0.1052498 9.9844e-01 1.8049e-03 weaklyHypometh 1.0000e+00 1.1193e-01 insignificant 9.9894e-01 1.9851e-02 weaklyHypometh 1.0000e+00 7.9405e-01 insignificant -0.10036058 6.8731e-02 lowCoverage 1.0000000 lowCoverage 0.597579 0.5145119 7.3574e-02 5 0.555115 0.4931342 0.06198125 2.0147e-03 0.774897 weaklyHypermeth 2.0986e-02 1 weaklyHypermeth 5.3207e-02 0.782005 insignificant 5.1578e-01 1 insignificant 0.0414029 3.8189e-01 lowCoverage 1.0000e+00 lowCoverage 0.597579 0.6725352 -0.07961239 5 0.5551154 0.6352756 -0.08016016 9.9820e-01 3.4090e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.7080e-01 7.9171e-02 insignificant 1.0000e+00 1.0000000 insignificant -0.0540413 2.9644e-01 lowCoverage 1.0000000 lowCoverage 0.5145119 0.6725352 -0.1512470 5 0.4931342 0.6352756 -0.14214141 9.9799e-01 1.3525e-04 weaklyHypometh 1.0000e+00 2.2542e-03 weaklyHypometh 0.9861671 5.7978e-03 weaklyHypometh 1.00000 8.6535e-02 weaklyHypometh -0.0954442 1.0421e-01 lowCoverage 1.0000e+00 lowCoverage chr6 150377829 150378829 25053 ENSG00000218358 0.127117 193 9 0.1526900 254 9 0.2210001 283 9 0.1091779 164 4 0.1438488 150 9 0.245777 235 9 0.109431 316 9 0.1043162 217 9 0.106887 356 9 0.076082 320 9 0.1068149 144 9 0.060675 407 9 0.0389799 272 9 0.10256 78 2 0.102880 327 9 0.060626 427 9 0.077796 477 9 0.0641071 184 4 0.077236 143 9 0.0397486 269 9 0.2233918 67 4 0.0594650 91 4 0.092888 172 9 0.117901 133 9 0.3009524 90 4 0.0430606 231 9 0.0132700 120 6 0.093651 63 5 0.059248 223 9 0.3053632 552 9 0.0362090 320 9 0.052208 290 9 0.0349327 150 9 0.034722 161 9 0.0000000 42 2 0.0277778 54 4 0.061067 84 6 0.01515152 202 9 0.0913289 249 9 0.1192784 167 9 0.0939319 159 4 0.2265109 151 4 0.084851 166 4 0.1458480 0.171805 0.2569359 0.1153379 0.1444158 0.230853 0.161613 0.1433898 0.192679 0.079345 0.135491 0.085529 0.0460757 NA 0.136968 0.101885 0.0934310 0.1285775 0.079398 0.0459637 0.218445 0.1276475 0.099987 0.110194 0.1584621 0.0485779 0.0258276 0.080093 0.072203 0.3336083 0.0322915 0.062889 0.0154759 0.0095566 NA 0.0076453 0.087180 0.0041701 0.0609753 0.1215765 0.1187623 0.4400034 0.105296 4 0.103144 0.130952 -2.5127e-02 9 0.098179 0.1309681 -0.03278893 0.90500637 0.00824849 weaklyHypometh 1.00000 0.453026 insignificant 0.0888932 0.99479387 insignificant 1 1.00000 insignificant -0.0100796 0.7563360 insignificant 1.00000 insignificant 0.103144 0.0245310 0.0852807 9 0.098179 0.0284171 0.06976212 6.7970e-10 0.9924869 weaklyHypermeth 1.2587e-08 1.00000 weaklyHypermeth 1.4950e-10 0.999811 weaklyHypermeth 6.2292e-09 1 weaklyHypermeth 0.07744583 2.5729e-05 weaklyHypermeth 1.0291e-03 weaklyHypermeth 0.103144 0.159193 -0.03978034 9 0.0981792 0.130081 -0.0319015 8.7642e-01 1.9029e-03 weaklyHypometh 1.0000e+00 1.1193e-01 insignificant 4.6929e-02 6.4816e-01 inconclusive 1.0000e+00 1.0000e+00 insignificant -0.01679248 5.8520e-01 insignificant 1.0000000 insignificant 0.130952 0.0245310 1.0950e-01 9 0.130968 0.0284171 0.10255105 1.3024e-05 0.999971 weaklyHypermeth 1.8343e-04 1 weaklyHypermeth 8.1169e-06 0.999893 weaklyHypermeth 1.8447e-04 1 weaklyHypermeth 0.0875255 1.4023e-02 weaklyHypermeth 2.1573e-01 insignificant 0.130952 0.1591928 -0.02833084 9 0.1309681 0.1300807 0.00088740 4.2606e-01 2.7507e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.8109e-01 2.2972e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0067128 8.6833e-01 insignificant 1.0000000 insignificant 0.0245310 0.1591928 -0.1303705 9 0.0284171 0.1300807 -0.10166365 9.9916e-01 3.0570e-05 weaklyHypometh 1.0000e+00 5.9750e-04 weaklyHypometh 0.9901496 1.2309e-04 weaklyHypometh 1.00000 3.8466e-03 weaklyHypometh -0.0942383 2.0652e-02 weaklyHypometh 2.9930e-01 insignificant chr6 150434629 150435629 25054 ULBP3 ENSG00000131019 0.750404 476 7 0.8535757 167 7 0.5910722 149 6 0.7823129 58 4 0.5980952 108 6 0.717076 335 7 0.837903 235 7 0.7443465 176 7 0.710701 129 7 0.909943 127 6 0.6898539 205 7 0.813221 145 6 0.7875834 144 7 0.51852 18 2 0.637410 174 7 0.667164 121 6 0.714793 127 6 0.7159639 323 7 0.759631 245 7 0.7601489 245 7 0.7131054 88 7 0.6156463 54 5 0.834737 187 7 0.731864 171 7 0.8253968 38 3 0.7390533 190 7 0.7861796 166 8 0.709863 89 6 0.844223 151 7 0.8332728 222 7 0.8359177 176 6 0.614547 273 6 0.7427225 177 7 0.541147 193 7 0.5209335 156 6 0.5982906 49 4 0.578247 181 8 0.71837973 179 6 0.8931375 360 6 0.9084600 249 7 0.8043956 92 3 0.8158434 200 5 0.735116 233 7 0.8277416 0.832206 0.6151161 0.8439959 0.7514838 0.833260 0.803262 0.7753504 0.780094 0.867847 0.850989 0.791515 0.8471386 0.86660 0.837030 0.758075 0.6734849 0.7847695 0.863704 0.8264360 0.773935 0.8131056 0.814102 0.761601 0.8067712 0.8419432 0.7910206 0.803850 0.862618 0.8564663 0.8727793 0.755291 0.7529648 0.6817752 0.68682858 0.7141867 0.845089 0.7287397 0.8634668 0.8928557 0.8926899 0.8849192 0.856479 3 0.812331 0.800000 8.5859e-03 7 0.670120 0.7323330 -0.06221255 0.62663258 0.61178126 insignificant 1.00000 1.000000 insignificant 0.8065120 0.64928550 insignificant 1 1.00000 insignificant -0.0289981 0.3747669 insignificant 1.00000 insignificant 0.812551 0.7187166 0.0952360 7 0.731041 0.6005648 0.13047568 1.6671e-05 0.9329663 weaklyHypermeth 2.1103e-04 1.00000 weaklyHypermeth 7.7065e-04 0.899562 weaklyHypermeth 1.2634e-02 1 weaklyHypermeth 0.11136574 3.1898e-02 weaklyHypermeth 4.3695e-01 insignificant 0.812636 0.888889 -0.06718704 6 0.7263668 0.785169 -0.0588023 9.0294e-01 3.1454e-03 weaklyHypometh 1.0000e+00 1.6555e-01 insignificant 9.9292e-01 2.0411e-04 weaklyHypometh 1.0000e+00 2.5513e-02 weaklyHypometh -0.10340477 2.6213e-02 weaklyHypometh 0.6553369 insignificant 0.800333 0.7187166 8.8280e-02 7 0.753454 0.6005648 0.15288937 7.5831e-03 0.865621 weaklyHypermeth 7.0214e-02 1 weaklyHypermeth 7.1524e-03 0.854185 weaklyHypermeth 8.8302e-02 1 weaklyHypermeth 0.1403638 1.1815e-02 weaklyHypermeth 1.8874e-01 insignificant 0.799889 0.8888889 -0.06290685 6 0.7287996 0.7851691 -0.05636947 9.9331e-01 1.7356e-03 weaklyHypometh 1.0000e+00 2.4795e-01 insignificant 9.9874e-01 7.5735e-04 weaklyHypometh 1.0000e+00 0.1893379 insignificant -0.0744067 9.4367e-02 insignificant 1.0000000 insignificant 0.7202572 0.8888889 -0.1321729 6 0.6606213 0.7851691 -0.12454778 9.9395e-01 7.9590e-05 weaklyHypometh 1.0000e+00 1.4212e-03 weaklyHypometh 0.9979820 2.4630e-04 weaklyHypometh 1.00000 6.3155e-03 weaklyHypometh -0.2147705 1.8516e-03 weaklyHypometh 5.2903e-02 weaklyHypometh chr6 150565229 150566229 25058 ENSG00000208527 0.947019 321 5 0.9806452 167 5 0.8318182 59 5 0.9276596 235 5 0.9846154 69 5 0.872658 158 5 0.981818 55 5 1.0000000 54 5 0.900000 20 0 1.000000 15 0 0.9843077 120 5 1.000000 20 0 0.9333333 13 0 1.00000 5 0 0.966667 28 4 NA 0 0 NA 0 0 0.9412980 230 5 0.931624 132 5 0.9639744 174 5 1.0000000 1 0 0.9000000 10 2 1.000000 51 5 0.750000 9 0 0.9289216 39 2 0.9436764 195 5 0.6666667 3 0 NA 0 0 0.976744 208 5 0.9872222 226 5 0.9735147 230 5 0.977460 174 5 0.8613303 107 5 0.321719 206 5 NA 0 0 0.9423044 414 5 0.464762 30 5 0.88386724 143 5 0.9418037 240 5 0.9442608 215 5 0.9691913 199 5 0.9032258 164 5 0.985714 212 5 0.9166667 1.000000 0.7916667 0.9007092 1.0000000 0.942308 1.000000 1.0000000 0.916667 1.000000 0.966667 1.000000 1.0000000 1.00000 0.972222 NA NA 1.0000000 0.923077 0.9694327 0.996326 0.8333333 1.000000 1.000000 0.8415033 0.9458333 0.1666667 NA 0.941860 0.9652778 0.9673203 0.972222 0.8648504 0.1413086 NA 0.9305556 0.266667 0.9394180 0.9319728 0.9356061 0.9959350 1.0000000 1.000000 0 0.948800 0.968559 -2.0161e-02 5 0.947700 0.9696621 -0.02196225 0.98145289 0.03236824 weaklyHypometh 1.00000 0.934089 insignificant 0.6152261 0.38072490 insignificant 1 1.00000 insignificant 0.0340713 0.3487529 lowCoverage 1.00000 lowCoverage 0.948800 0.7677778 0.1766946 5 0.947700 0.7665206 0.18117920 1.3120e-06 0.9999990 weaklyHypermeth 1.8478e-05 1.00000 weaklyHypermeth 3.3219e-07 1.000000 weaklyHypermeth 8.7418e-06 1 weaklyHypermeth 0.25783889 1.0979e-01 lowCoverage 1.0000e+00 lowCoverage 0.948800 0.951456 -0.00481497 5 0.9476998 0.950872 -0.0031720 8.3768e-01 2.9436e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.5638e-01 9.5733e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00379628 8.3666e-01 lowCoverage 1.0000000 lowCoverage 0.968559 0.7677778 1.9959e-01 5 0.969662 0.7665206 0.20314145 1.8366e-04 0.999985 weaklyHypermeth 2.2957e-03 1 weaklyHypermeth 6.1173e-06 0.999998 weaklyHypermeth 1.5293e-04 1 weaklyHypermeth 0.2237676 1.5177e-01 lowCoverage 1.0000e+00 lowCoverage 0.968559 0.9514563 0.01527855 5 0.9696621 0.9508718 0.01879029 1.8731e-01 7.5575e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.6396e-02 8.9492e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0302750 4.1544e-01 lowCoverage 1.0000000 lowCoverage 0.7677778 0.9514563 -0.1843444 5 0.7665206 0.9508718 -0.18435116 9.9956e-01 1.0361e-02 weaklyHypometh 1.0000e+00 1.0465e-01 insignificant 0.9999137 6.1968e-04 weaklyHypometh 1.00000 1.2910e-02 weaklyHypometh -0.2540426 1.1362e-01 lowCoverage 1.0000e+00 lowCoverage chr6 150582529 150583529 25061 ENSG00000208527 0.660932 122 6 0.6076994 123 6 0.5833333 27 3 0.5981326 149 6 0.7425170 36 3 0.676322 116 7 0.368386 49 6 0.6750991 90 6 0.438776 41 6 0.581633 27 3 0.6057453 140 7 0.500000 22 3 0.5224490 40 6 0.51389 33 3 0.541667 20 3 0.500000 15 0 0.640000 75 3 0.7323232 114 6 0.591780 94 7 0.5908009 74 3 0.7840909 38 3 0.7500000 27 3 0.607143 54 4 0.574263 52 6 0.5234594 88 6 0.6422619 110 6 0.6605223 101 3 0.442857 22 3 0.573626 55 6 0.6686853 155 6 0.5706253 96 6 0.613265 112 6 0.4962062 64 6 0.763889 39 3 0.5854701 59 6 0.5000000 9 0 0.591870 84 6 0.71488095 124 6 0.6273726 74 6 0.6483871 137 6 0.6830065 73 6 0.6515152 42 3 0.581169 85 6 0.6687889 0.536094 0.4671053 0.5887365 0.6723997 0.664787 0.328164 0.6134306 0.239348 0.485902 0.586976 0.638158 0.6203008 0.55976 0.573273 0.605263 0.6394133 0.6793594 0.606412 0.5588688 0.657994 0.7020677 0.548872 0.429485 0.5087904 0.5457785 0.5692236 0.294737 0.487854 0.5959814 0.5602671 0.586591 0.5837792 0.7587719 0.54082321 0.5986842 0.696298 0.6318531 0.6006625 0.5971703 0.6279670 0.6650718 0.592479 0 0.599147 0.594505 1.2297e-03 6 0.608543 0.6125987 -0.00405598 0.68982852 0.29077420 insignificant 1.00000 1.000000 insignificant 0.5219267 0.21953597 insignificant 1 1.00000 insignificant -0.0339925 0.3293804 lowCoverage 1.00000 lowCoverage 0.599147 0.6569921 -0.0469524 6 0.608543 0.6257608 -0.01721810 8.1299e-01 0.0356536 weaklyHypometh 1.0000e+00 1.00000 insignificant 8.1610e-01 0.057970 insignificant 1.0000e+00 1 insignificant -0.02514520 6.2710e-01 lowCoverage 1.0000e+00 lowCoverage 0.599147 0.635036 -0.03574865 6 0.6085427 0.626967 -0.0184245 9.0798e-01 2.0593e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.5884e-01 3.7632e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.05471587 5.7227e-02 lowCoverage 1.0000000 lowCoverage 0.594505 0.6569921 -4.6363e-02 6 0.612599 0.6257608 -0.01316212 7.6135e-01 0.084732 insignificant 1.0000e+00 1 insignificant 5.1524e-01 0.129202 insignificant 1.0000e+00 1 insignificant 0.0088473 8.6982e-01 lowCoverage 1.0000e+00 lowCoverage 0.594505 0.6350365 -0.03878347 6 0.6125987 0.6269672 -0.01436852 7.4690e-01 2.9409e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.7126e-01 4.3708e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0207234 5.2404e-01 lowCoverage 1.0000000 lowCoverage 0.6569921 0.6350365 0.0107727 6 0.6257608 0.6269672 -0.00120641 2.3129e-01 4.2715e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.6654977 5.1731e-01 insignificant 1.00000 1.0000e+00 insignificant -0.0295707 5.5936e-01 lowCoverage 1.0000e+00 lowCoverage chr6 151175629 151176629 25082 PLEKHG1 ENSG00000120278 0.780148 391 13 0.5117124 203 10 0.6412636 154 7 0.8119720 314 14 0.6476739 192 10 0.812693 357 13 0.585145 249 10 0.6166691 150 7 0.624288 158 8 0.627582 123 9 0.7740335 312 10 0.524097 117 7 0.7951063 207 9 0.72563 154 6 0.748403 171 9 0.461429 115 6 0.951318 151 6 0.7710881 534 11 0.740433 199 11 0.7508846 313 8 0.6516582 69 6 0.7878902 79 6 0.810101 256 9 0.813636 71 7 0.7833353 112 6 0.8006128 268 15 0.6656463 151 7 0.736111 78 6 0.656986 268 10 0.6718171 225 12 0.7221664 163 11 0.738026 312 12 0.3909933 289 10 0.483294 227 9 0.4760758 141 10 0.7615873 45 4 0.504639 155 7 0.45073114 284 15 0.7136977 368 15 0.7940242 331 14 0.6286071 430 14 0.7406783 329 6 0.770444 293 11 0.7549494 0.577258 0.6869015 0.7276927 0.6836765 0.761184 0.771606 0.7115740 0.712804 0.778473 0.800038 0.557989 0.7542397 0.73215 0.719293 0.643936 0.7922082 0.6715817 0.672547 0.7453327 0.843765 0.6784366 0.769134 0.894212 0.7661652 0.7390939 0.6795135 0.795564 0.689106 0.6819375 0.6811543 0.784665 0.3729345 0.4074967 0.43326905 0.6621274 0.592127 0.3767322 0.6960748 0.7012147 0.6915928 0.8357623 0.614095 3 0.720237 0.738897 -6.0653e-03 10 0.791515 0.7510965 0.04041823 0.25393486 0.54765188 insignificant 1.00000 1.000000 insignificant 0.9382303 0.13863988 insignificant 1 1.00000 insignificant -0.0414204 0.2151197 insignificant 1.00000 insignificant 0.719956 0.4403509 0.2834887 10 0.765714 0.4927195 0.27299428 3.4109e-20 0.9999999 hypermethylated 9.4747e-19 1.00000 hypermethylated 1.9366e-07 0.999913 hypermethylated 5.5333e-06 1 hypermethylated 0.18385839 1.4765e-02 weaklyHypermeth 2.5161e-01 insignificant 0.720149 0.694460 0.03535950 9 0.7873328 0.714043 0.0732899 4.9326e-03 9.9095e-01 weaklyHypermeth 1.4947e-01 1.0000e+00 insignificant 6.7109e-01 9.6624e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03441177 4.0037e-01 insignificant 1.0000000 insignificant 0.739003 0.4402460 3.0307e-01 10 0.763053 0.4768465 0.28620693 4.5666e-15 1.000000 hypermethylated 1.2017e-13 1 hypermethylated 1.3222e-05 0.999996 hypermethylated 2.8743e-04 1 hypermethylated 0.2252788 6.2230e-03 weaklyHypermeth 1.1233e-01 insignificant 0.739003 0.6944603 0.05540829 9 0.7512061 0.7140430 0.03716318 9.6975e-02 9.9719e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.6547e-01 9.9797e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0070087 8.4165e-01 insignificant 1.0000000 insignificant 0.4414097 0.6942857 -0.2332118 9 0.5270409 0.6989926 -0.17195168 9.9767e-01 9.4360e-10 hypomethylated 1.0000e+00 3.4948e-08 hypomethylated 0.9998728 3.7224e-04 hypomethylated 1.00000 8.5525e-03 hypomethylated -0.2182702 7.1621e-03 weaklyHypometh 1.4043e-01 insignificant chr6 151402229 151403229 25091 ENSG00000221469 0.801699 282 7 0.7266390 134 7 0.8656463 113 4 0.7805927 167 7 0.7814626 69 7 0.834203 356 7 0.877438 101 7 0.8179157 154 7 0.768013 122 7 0.789904 84 7 0.8372449 274 7 0.421053 53 4 0.8119612 137 7 0.82083 29 1 0.857823 124 7 0.783359 46 3 0.701627 77 5 0.7855022 183 7 0.802764 203 7 0.8022794 333 7 0.6823188 59 4 0.7250000 75 4 0.778436 139 7 0.864241 99 6 0.7795918 58 6 0.8518256 206 7 0.6920588 83 6 0.417419 66 4 0.842725 113 7 0.7930308 241 7 0.8530315 216 7 0.776845 394 7 0.7382422 130 7 0.790339 108 7 0.6958550 171 7 0.8292779 52 4 0.739679 122 5 0.78490805 202 7 0.8756569 238 7 0.8209166 244 7 0.8326737 200 7 0.8795677 213 7 0.864290 196 7 0.8042209 0.766189 0.8514803 0.8315362 0.8362092 0.845654 0.899777 0.8120032 0.811098 0.834659 0.830806 0.668125 0.8195497 0.83744 0.874104 0.800181 0.7616818 0.8071252 0.813186 0.8372327 0.865141 0.7883895 0.787324 0.862257 0.8028803 0.8310289 0.7961592 0.691328 0.834530 0.8352113 0.8676166 0.859762 0.7630066 0.8480445 0.80297558 0.8779788 0.762445 0.7905973 0.8727004 0.8413313 0.8639606 0.8681128 0.910175 4 0.829332 0.825043 -3.4406e-03 7 0.690186 0.6860175 0.00416897 0.51695705 0.18823247 insignificant 1.00000 1.000000 insignificant 0.7797775 0.58833079 insignificant 1 1.00000 insignificant 0.0286876 0.4962882 insignificant 1.00000 insignificant 0.829549 0.7668790 0.0382571 7 0.709205 0.7285439 -0.01933880 3.4618e-02 0.8761878 weaklyHypermeth 2.7694e-01 1.00000 insignificant 1.0727e-01 0.731284 insignificant 9.4930e-01 1 insignificant 0.02034781 4.8935e-01 insignificant 1.0000e+00 insignificant 0.829871 0.879010 -0.04520905 7 0.7988644 0.850686 -0.0518218 9.9823e-01 3.6002e-03 weaklyHypometh 1.0000e+00 1.8001e-01 insignificant 9.9946e-01 5.7238e-03 weaklyHypometh 1.0000e+00 4.2439e-01 insignificant -0.07122303 7.7450e-03 weaklyHypometh 0.2750312 insignificant 0.825115 0.7668790 4.6667e-02 7 0.674619 0.7285439 -0.05392466 9.8375e-04 0.593813 weaklyHypermeth 1.0578e-02 1 weaklyHypermeth 5.9045e-02 0.496831 insignificant 5.5702e-01 1 insignificant -0.0083398 8.3914e-01 insignificant 1.0000e+00 insignificant 0.828044 0.8790101 -0.03945657 7 0.7994560 0.8506862 -0.05123017 9.9123e-01 3.6354e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9616e-01 1.1298e-02 weaklyHypometh 1.0000e+00 0.7982107 insignificant -0.0999107 1.8947e-02 weaklyHypometh 0.8541057 insignificant 0.7672634 0.8790101 -0.0887037 7 0.7550627 0.8506862 -0.09562351 9.9448e-01 1.7757e-04 weaklyHypometh 1.0000e+00 2.9110e-03 weaklyHypometh 0.9947097 1.7115e-03 weaklyHypometh 1.00000 3.3558e-02 weaklyHypometh -0.0915708 3.7534e-03 weaklyHypometh 8.9367e-02 weaklyHypometh chr6 151447429 151448429 25097 ENSG00000221469 0.768616 117 5 0.5840959 99 6 0.5880952 41 5 0.6510652 89 6 0.7529762 45 6 0.804727 113 6 0.662500 30 4 0.7809727 75 6 0.669524 81 6 0.708333 22 1 0.5548702 115 6 0.444444 13 0 0.6771930 81 6 0.69583 48 6 0.737745 51 4 0.600000 13 0 1.000000 6 0 0.6672516 136 7 0.845588 59 6 0.5404088 69 4 0.7250000 29 3 1.0000000 6 0 0.787431 51 4 0.625000 32 4 0.6241667 59 5 0.7059524 99 6 0.8916667 42 3 0.869048 20 1 0.585843 103 6 0.6633173 108 6 0.5647467 88 6 0.713614 69 6 0.4841792 87 6 0.574603 78 6 0.6523810 93 6 0.5333333 11 0 0.572222 68 6 0.69947917 78 6 0.7454545 95 6 0.6459064 72 4 0.7046594 85 5 0.8047101 75 3 0.590336 123 6 0.6521130 0.597841 0.6323954 0.6226646 0.7313312 0.746711 0.712121 0.8008843 0.576741 0.659091 0.698637 0.479798 0.6271930 0.62689 0.683044 0.541330 0.7281704 0.5984662 0.794415 0.6205331 0.678030 0.9467853 0.795330 0.666667 0.6116101 0.5786436 0.9053030 0.844697 0.784428 0.6886720 0.6042533 0.662967 0.5116389 0.5454545 0.63203463 0.4650505 0.583333 0.7460227 0.6787879 0.6093169 0.7170975 0.6984113 0.608034 0 0.674131 0.688385 -8.4174e-03 6 0.675914 0.6987651 -0.02285067 0.43113064 0.31089092 insignificant 1.00000 1.000000 insignificant 0.8828763 0.07622841 insignificant 1 1.00000 insignificant -0.0429368 0.3756438 lowCoverage 1.00000 lowCoverage 0.674401 0.6072289 0.0696578 6 0.697904 0.5512059 0.14669791 1.4388e-03 0.9965147 weaklyHypermeth 1.5011e-02 1.00000 weaklyHypermeth 2.2913e-02 0.973078 weaklyHypermeth 2.5459e-01 1 insignificant 0.10067898 3.2758e-02 lowCoverage 4.4235e-01 lowCoverage 0.674131 0.668151 -0.01406882 6 0.6583230 0.811669 -0.1533456 9.5941e-01 6.8630e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.2479e-01 5.6235e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01150134 8.1005e-01 lowCoverage 1.0000000 lowCoverage 0.687943 0.6072289 8.0784e-02 6 0.661111 0.5512059 0.10990491 8.7975e-04 0.991841 weaklyHypermeth 9.7750e-03 1 weaklyHypermeth 3.2440e-03 0.998188 weaklyHypermeth 4.4438e-02 1 weaklyHypermeth 0.1436158 1.1674e-02 lowCoverage 1.8874e-01 lowCoverage 0.687943 0.6666667 0.00578164 6 0.6611108 0.7645858 -0.10347502 6.8959e-01 3.8868e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.6818e-01 6.6028e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0314355 5.6974e-01 lowCoverage 1.0000000 lowCoverage 0.6072289 0.6666667 -0.0822888 6 0.5512059 0.7645858 -0.21337993 9.9674e-01 7.2011e-02 insignificant 1.0000e+00 6.0513e-01 insignificant 0.9998556 4.4375e-02 weaklyHypometh 1.00000 4.7715e-01 insignificant -0.1121803 5.0693e-02 lowCoverage 5.8945e-01 lowCoverage chr6 151735329 151736329 25105 AKAP12 ENSG00000131016 0.672087 335 10 0.6913624 152 10 0.5602829 142 10 0.7344551 209 10 0.6716667 75 9 0.702670 357 10 0.728939 118 10 0.7278619 122 10 0.678533 115 10 0.711693 119 8 0.6943322 330 10 0.772817 70 7 0.7731868 145 10 0.84375 40 4 0.716461 121 10 0.619646 83 7 0.581566 74 7 0.7940382 216 10 0.577737 159 10 0.6660472 280 10 0.7194444 51 5 0.7723077 78 9 0.747570 194 10 0.743056 58 6 0.8025000 67 10 0.6562320 198 10 0.7348077 62 5 0.850000 39 4 0.615246 118 10 0.7349011 217 10 0.6766846 176 10 0.716406 420 10 0.6461407 146 10 0.633889 150 10 0.7022968 216 10 0.6375000 71 7 0.720314 87 10 0.63569324 186 10 0.7911728 298 10 0.7783588 316 10 0.7959375 241 10 0.7864517 259 10 0.750957 375 10 0.7263443 0.722933 0.5267901 0.7650595 0.7101384 0.740795 0.769445 0.7429324 0.764532 0.758299 0.758164 0.821464 0.8026580 0.77377 0.757777 0.686856 0.6923229 0.8096501 0.706577 0.7044185 0.750201 0.7888087 0.788798 0.824308 0.8431709 0.6818612 0.7481949 0.799069 0.688699 0.7453433 0.7370866 0.760897 0.6784245 0.6744083 0.72127153 0.6968412 0.763992 0.6825473 0.8341229 0.8172775 0.8371528 0.8290670 0.804587 4 0.717485 0.746126 -1.5423e-02 10 0.689334 0.6994390 -0.01010462 0.71681604 0.21260383 insignificant 1.00000 1.000000 insignificant 0.8168551 0.04072332 weaklyHypometh 1 1.00000 insignificant -0.0348063 0.1664240 insignificant 1.00000 insignificant 0.717485 0.6950935 0.0314160 10 0.689334 0.6680797 0.02125468 1.0410e-01 0.9754449 insignificant 7.3309e-01 1.00000 insignificant 1.2886e-01 0.976225 insignificant 1.0000e+00 1 insignificant 0.03331768 1.5951e-01 insignificant 1.0000e+00 insignificant 0.717365 0.763600 -0.08093088 10 0.6961347 0.775690 -0.0795554 9.9990e-01 2.1341e-05 weaklyHypometh 1.0000e+00 3.5569e-03 weaklyHypometh 9.9997e-01 7.9359e-05 weaklyHypometh 1.0000e+00 1.2302e-02 weaklyHypometh -0.08461891 1.0941e-04 weaklyHypometh 0.0136758 weaklyHypometh 0.746126 0.6950935 4.7786e-02 10 0.699439 0.6680797 0.03135930 1.1892e-02 0.999758 weaklyHypermeth 1.0524e-01 1 insignificant 5.3641e-02 0.999984 insignificant 5.1578e-01 1 insignificant 0.0681240 1.2410e-02 weaklyHypermeth 1.9390e-01 insignificant 0.746411 0.7635997 -0.06786869 10 0.7092707 0.7756901 -0.06641940 1.0000e+00 4.5689e-05 weaklyHypometh 1.0000e+00 9.1378e-03 weaklyHypometh 9.9965e-01 5.2299e-03 weaklyHypometh 1.0000e+00 0.6733587 insignificant -0.0498126 2.4884e-02 weaklyHypometh 0.9145002 insignificant 0.6951934 0.7635997 -0.1178158 10 0.6685036 0.7756901 -0.10718649 1.0000e+00 2.0885e-06 weaklyHypometh 1.0000e+00 4.9726e-05 weaklyHypometh 0.9999978 1.0714e-05 weaklyHypometh 1.00000 4.8699e-04 weaklyHypometh -0.1179366 2.2659e-04 weaklyHypometh 1.1926e-02 weaklyHypometh chr6 157082229 157083229 25163 ENSG00000220347 0.177673 343 13 0.1441180 227 13 0.1684722 258 13 0.1126648 162 11 0.0639051 134 6 0.191458 245 13 0.060570 445 13 0.2116183 143 11 0.045055 195 10 0.037724 270 13 0.1160426 435 13 0.039986 427 13 0.0674088 311 13 NA 0 0 0.127431 344 13 0.038566 366 13 0.147823 126 9 0.2453040 126 8 0.331383 146 9 0.4269576 158 9 0.0757985 105 9 0.3116723 115 8 0.051938 303 13 0.094498 119 9 0.3401515 58 7 0.3314621 175 12 0.1673344 116 11 0.150689 51 5 0.193660 185 9 0.3996290 292 13 0.8282064 119 8 0.021755 452 13 0.0125000 217 13 0.228342 297 13 0.0027548 313 11 0.0822650 106 7 0.012500 69 9 0.00122100 385 13 0.5596675 354 13 0.5211727 444 13 0.4640936 254 13 0.2620416 315 11 0.352955 330 11 0.1650999 0.145157 0.1679389 0.0920348 0.0726229 0.184599 0.052755 0.1779911 0.053977 0.048343 0.092079 0.034881 0.0574938 NA 0.146769 0.033183 0.1491143 0.2578995 0.340329 0.4008022 0.118830 0.1909119 0.032856 0.105098 0.3286540 0.3113387 0.1348154 0.204453 0.126117 0.3956652 0.8195300 0.025040 0.0074627 0.2728278 0.00425793 0.0478337 0.062320 0.0011846 0.4492748 0.4572386 0.4021756 0.2906087 0.292827 2 0.122197 0.194737 -7.3265e-02 13 0.125072 0.1950059 -0.06993419 0.99995482 0.00129907 weaklyHypometh 1.00000 0.129907 insignificant 0.9961145 0.02707571 weaklyHypometh 1 1.00000 insignificant -0.1022769 0.1567538 insignificant 1.00000 insignificant 0.122197 0.0699351 0.0464947 13 0.125072 0.0662840 0.05878773 7.3079e-04 0.9995952 weaklyHypermeth 8.1199e-03 1.00000 weaklyHypermeth 1.6721e-07 1.000000 weaklyHypermeth 4.9179e-06 1 weaklyHypermeth 0.08835883 7.1625e-02 insignificant 7.7249e-01 insignificant 0.122197 0.419564 -0.28929937 13 0.1250717 0.450616 -0.3255440 1.0000e+00 1.1490e-41 hypomethylated 1.0000e+00 1.1490e-38 hypomethylated 1.0000e+00 3.9432e-17 hypomethylated 1.0000e+00 3.9432e-14 hypomethylated -0.28703002 3.6094e-03 weaklyHypometh 0.2005237 insignificant 0.194737 0.0699351 1.2157e-01 13 0.195006 0.0662840 0.12872192 4.0017e-04 0.999999 weaklyHypermeth 4.7639e-03 1 weaklyHypermeth 5.9916e-07 1.000000 weaklyHypermeth 2.0661e-05 1 weaklyHypermeth 0.1906357 2.0109e-02 weaklyHypermeth 2.7223e-01 insignificant 0.194737 0.4195639 -0.21871576 13 0.1950059 0.4506158 -0.25560985 1.0000e+00 4.8912e-10 hypomethylated 1.0000e+00 2.4456e-07 hypomethylated 1.0000e+00 9.3705e-06 hypomethylated 1.0000e+00 0.0046853 hypomethylated -0.1847531 4.6923e-02 weaklyHypometh 1.0000000 insignificant 0.0699351 0.4195639 -0.3381137 13 0.0662840 0.4506158 -0.38433177 1.0000e+00 3.1024e-22 hypomethylated 1.0000e+00 2.0683e-20 hypomethylated 1.0000000 4.1453e-14 hypomethylated 1.00000 8.2907e-12 hypomethylated -0.3753889 6.7621e-04 hypomethylated 2.6008e-02 hypomethylated chr6 157750929 157751929 25186 ZDHHC14 ENSG00000175048 0.749941 82 5 0.6688059 86 3 0.7201238 88 5 0.6605837 105 5 0.7679487 51 5 0.768686 187 5 0.730736 69 3 0.7369539 71 5 0.662597 66 5 0.749247 97 5 0.7552363 106 5 0.756140 72 5 0.7851868 91 5 NA 0 0 0.707246 83 5 0.804762 21 3 0.747631 65 5 0.6904926 120 5 0.702582 125 5 0.7149959 253 5 0.7211111 32 3 0.8107143 49 5 0.666346 109 5 0.689240 65 5 0.7750000 40 5 0.7116571 173 5 0.6409091 37 3 0.743776 41 3 0.810539 54 3 0.6063039 128 3 0.6948649 125 4 0.688415 181 5 0.5745282 93 5 0.591414 37 3 0.5250980 123 5 0.7794872 45 3 0.583333 36 3 0.59136839 135 3 0.7155072 96 5 0.7349293 104 5 0.7161327 150 5 0.8270120 158 5 0.773347 146 5 0.6654494 0.535499 0.6343594 0.5922912 0.6772415 0.689328 0.624673 0.6603548 0.582659 0.678857 0.677059 0.684602 0.7134108 NA 0.653051 0.723233 0.6774255 0.5921648 0.671775 0.6325566 0.611783 0.7432894 0.641016 0.650538 0.7117834 0.6396237 0.6075565 0.637112 0.732882 0.6667320 0.6273541 0.649469 0.5443804 0.5860194 0.53092294 0.7443655 0.498839 0.5912813 0.6297655 0.6582249 0.6082934 0.7678618 0.704802 3 0.698041 0.666344 -4.6202e-03 5 0.725529 0.7135846 0.01194404 0.17858795 0.37371395 insignificant 1.00000 1.000000 insignificant 0.6605368 0.34895417 insignificant 1 1.00000 insignificant 0.0172811 0.4126276 lowCoverage 1.00000 lowCoverage 0.698041 0.5671642 0.0849173 5 0.725529 0.5809382 0.14459046 2.9039e-07 0.9960053 weaklyHypermeth 4.5373e-06 1.00000 weaklyHypermeth 5.2944e-04 0.959817 weaklyHypermeth 8.8239e-03 1 weaklyHypermeth 0.12298260 1.7291e-02 lowCoverage 2.7888e-01 lowCoverage 0.698041 0.778287 -0.03148343 5 0.7255286 0.758474 -0.0329454 9.5913e-01 2.7768e-02 weaklyHypometh 1.0000e+00 7.8412e-01 insignificant 8.5857e-01 3.4918e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02286490 3.6419e-01 lowCoverage 1.0000000 lowCoverage 0.666344 0.5671642 9.1770e-02 5 0.713585 0.5809382 0.13264642 5.4091e-05 0.986295 weaklyHypermeth 7.2121e-04 1 weaklyHypermeth 4.6199e-03 0.989261 weaklyHypermeth 6.1599e-02 1 weaklyHypermeth 0.1057015 3.1349e-02 lowCoverage 4.0191e-01 lowCoverage 0.666344 0.7782875 -0.02362534 5 0.7135846 0.7584740 -0.04488939 7.6650e-01 7.1815e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 6.3003e-01 4.5564e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0401460 1.8170e-01 lowCoverage 1.0000000 lowCoverage 0.5671642 0.7782875 -0.1132590 5 0.5809382 0.7584740 -0.17753581 9.8134e-01 8.5001e-04 weaklyHypometh 1.0000e+00 1.0760e-02 weaklyHypometh 0.9624784 4.6823e-03 weaklyHypometh 1.00000 7.3528e-02 weaklyHypometh -0.1458475 8.2183e-03 lowCoverage 1.5219e-01 lowCoverage chr6 157808229 157809229 25190 ZDHHC14 ENSG00000175048 0.957811 161 3 0.8859813 300 5 0.8077169 83 5 0.9240363 154 3 0.7066667 69 5 0.883264 247 5 0.860173 77 5 0.9144928 162 5 0.754286 44 5 0.920000 36 3 0.8326645 278 5 0.800000 16 0 1.0000000 43 3 0.89306 57 4 0.733333 37 3 0.775000 26 3 NA 0 0 0.9697308 145 3 0.886532 346 5 0.9436617 267 5 1.0000000 54 3 NA 0 0 0.842093 130 3 0.679293 60 5 0.5555556 9 0 0.7528877 301 5 0.9241497 61 5 0.883333 34 3 0.919647 284 5 0.9598670 472 5 0.9818991 285 5 0.931417 283 5 0.9002772 198 5 0.887047 118 5 1.0000000 183 5 NA 0 0 0.993548 92 3 0.93539015 351 5 0.9820513 212 5 0.9694797 198 5 0.9698752 106 3 0.9699006 178 3 0.964231 145 5 0.9350943 0.893777 0.8653520 0.9409559 0.7153846 0.912862 0.784882 0.9133222 0.733700 0.876923 0.875494 0.961538 1.0000000 0.92500 0.948718 0.897436 NA 0.9348049 0.914012 0.9133256 1.000000 NA 0.904502 0.895105 0.5820906 0.9107341 0.9039377 0.784615 0.956543 0.9643673 0.9665830 0.943439 0.8936859 0.9401862 1.00000000 NA 0.990074 0.9485606 0.9668639 0.9733449 0.9536542 0.9629546 0.944970 0 0.896782 0.936138 -4.0839e-02 5 0.905244 0.8607879 0.04445594 0.94469720 0.01033275 weaklyHypometh 1.00000 0.508465 insignificant 0.8766801 0.32229313 insignificant 1 1.00000 insignificant 0.0084199 0.8581441 lowCoverage 1.00000 lowCoverage 0.896619 0.9490446 -0.0530987 5 0.867341 0.9375406 -0.07019922 9.9992e-01 0.0022046 weaklyHypometh 1.0000e+00 0.50442 insignificant 9.9855e-01 0.025514 weaklyHypometh 1.0000e+00 1 insignificant -0.07754695 2.7349e-02 lowCoverage 3.9225e-01 lowCoverage 0.896701 0.963051 -0.06658155 5 0.8894511 0.975886 -0.0864351 9.9996e-01 4.1610e-04 weaklyHypometh 1.0000e+00 3.4675e-02 weaklyHypometh 9.9975e-01 6.7615e-03 weaklyHypometh 1.0000e+00 4.3323e-01 insignificant -0.10540195 3.2396e-05 lowCoverage 0.0066561 lowCoverage 0.936928 0.9490446 -1.1950e-02 5 0.921770 0.9375406 -0.01577087 8.6704e-01 0.424205 insignificant 1.0000e+00 1 insignificant 9.6940e-01 0.255929 insignificant 1.0000e+00 1 insignificant -0.0859669 9.5727e-02 lowCoverage 9.2939e-01 lowCoverage 0.936548 0.9630513 -0.02465602 5 0.8931414 0.9758862 -0.08274476 9.0955e-01 2.9724e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 8.9522e-01 1.2771e-02 weaklyHypometh 1.0000e+00 0.7982107 insignificant -0.1138219 2.2207e-02 lowCoverage 0.8541057 lowCoverage 0.9490446 0.9629630 -0.0130204 5 0.9375406 0.9710634 -0.03352284 5.3262e-01 3.3392e-02 weaklyHypometh 1.0000e+00 2.9814e-01 insignificant 0.6420952 1.0279e-01 insignificant 1.00000 9.9794e-01 insignificant -0.0278550 2.9857e-01 lowCoverage 1.0000e+00 lowCoverage chr6 157976529 157977529 25202 ZDHHC14 ENSG00000175048 0.850000 45 6 0.8260582 134 9 0.8515177 181 7 0.8802083 42 2 0.7211919 127 7 0.851190 75 7 0.863814 158 9 0.8199481 84 8 0.785885 81 5 0.938566 86 5 0.8527038 299 9 0.921558 95 7 0.7644725 77 5 0.90000 11 0 0.866008 88 5 0.986667 106 5 0.929853 85 5 0.6851852 19 0 0.779525 122 5 0.9446779 58 4 0.7859307 64 5 0.7571429 17 1 0.739683 51 5 0.679987 61 5 0.7183908 62 2 0.8965211 100 7 0.8327160 40 3 0.843333 61 5 0.660317 34 5 0.8672896 277 9 0.8354023 121 7 0.781624 111 6 0.8894589 113 7 0.903487 135 7 1.0000000 52 4 0.8903382 86 6 0.981481 101 7 0.86413043 108 7 0.8823662 74 4 0.7359003 102 6 0.9139864 67 4 0.9206349 25 3 0.779261 96 7 0.8400000 0.702460 0.9366583 0.9566667 0.9180102 1.000000 0.788804 0.8463462 0.925263 0.929773 0.868829 0.953058 0.8144563 NA 0.840791 0.985778 0.9343223 0.8577778 0.805207 0.9239776 0.842936 0.7812832 0.829397 0.847259 NA 0.8498041 0.8562963 0.991111 0.671704 0.8627860 0.7608889 0.867920 0.8628852 0.9122268 0.99518797 0.9392593 0.971667 0.8755556 0.8340741 0.9101244 0.9174747 0.8520635 0.796952 1 0.868728 0.820281 2.3101e-02 7 0.858730 0.8422879 0.01644241 0.18423917 0.85122076 insignificant 1.00000 1.000000 insignificant 0.1304836 0.72330335 insignificant 1 1.00000 insignificant 0.0677567 0.0216153 weaklyHypermeth 1.00000 insignificant 0.868728 0.8739496 -0.0312110 7 0.858730 0.9016525 -0.04292218 7.1204e-01 0.0145777 weaklyHypometh 1.0000e+00 1.00000 insignificant 9.9218e-01 0.025827 weaklyHypometh 1.0000e+00 1 insignificant -0.07053113 2.9791e-02 weaklyHypometh 4.1376e-01 insignificant 0.868728 0.837017 0.01523324 4 0.8587303 0.837434 0.0212963 6.7699e-02 2.8889e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.3571e-01 3.6347e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.00452172 9.1637e-01 lowCoverage 1.0000000 lowCoverage 0.820281 0.8739496 -6.4107e-02 7 0.842288 0.9016525 -0.05936459 9.6823e-01 0.040791 weaklyHypometh 1.0000e+00 1 insignificant 9.9913e-01 0.015292 weaklyHypometh 1.0000e+00 1 insignificant -0.1382879 6.5765e-04 weaklyHypometh 1.8397e-02 weaklyHypometh 0.820281 0.8370166 -0.01109834 4 0.8422879 0.8374340 0.00485392 4.4905e-01 4.7542e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.5009e-01 4.5856e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage -0.0632350 1.8807e-01 lowCoverage 1.0000000 lowCoverage 0.8739496 0.8370166 0.0549923 4 0.9016525 0.8374340 0.06421851 1.0698e-01 9.7544e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.3821760 9.9202e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.0750528 1.3190e-01 lowCoverage 1.0000e+00 lowCoverage chr6 158972429 158973429 25248 ENSG00000214239 0.958333 47 5 0.9307404 132 6 0.8197333 126 5 0.9305556 34 4 0.8759921 78 5 0.957407 61 6 0.949989 98 5 0.8956699 67 5 0.906232 83 5 0.955437 86 5 0.9212835 217 6 0.815221 84 5 0.9305495 116 5 1.00000 1 0 0.932672 82 5 0.870833 65 5 0.906373 73 5 0.8577778 25 4 0.976344 139 6 0.8360390 55 5 0.9035594 60 5 0.9000000 16 1 0.853804 82 6 0.965079 59 4 0.5000000 2 0 0.8999272 108 6 0.9060847 41 5 0.873810 39 4 0.892694 78 5 0.9034816 158 6 0.8683230 91 6 0.906250 85 6 0.2789187 162 5 0.173333 148 5 0.1034552 174 6 1.0000000 15 1 0.229040 64 5 0.82347282 81 6 0.9445871 107 5 0.9407407 67 5 0.9166667 38 1 0.8991597 38 4 0.958333 56 5 0.9552632 0.926630 0.7486595 0.9114035 0.8718922 0.989474 0.958519 0.8887874 0.896628 0.968928 0.903870 0.813669 0.9131614 NA 0.904486 0.926535 0.8953302 0.8530994 0.967031 0.8718045 0.891350 0.9736842 0.912421 0.934837 0.5279918 0.9464750 0.8746032 0.832957 0.881514 0.9131651 0.8493364 0.914630 0.1361232 0.0063158 0.10949849 1.0000000 0.080750 0.8341763 0.9130194 0.9073684 0.8684211 0.8980982 0.955702 1 0.905333 0.897436 8.2738e-03 6 0.913755 0.8967219 0.01703296 0.06167306 0.66545996 insignificant 1.00000 1.000000 insignificant 0.1007041 0.68407572 insignificant 1 1.00000 insignificant 0.0469414 0.2134461 lowCoverage 1.00000 lowCoverage 0.905333 0.2065217 0.6804615 5 0.913755 0.2827821 0.63097274 4.4508e-40 1.0000000 hypermethylated 2.4726e-38 1.00000 hypermethylated 2.8628e-07 1.000000 hypermethylated 7.7374e-06 1 hypermethylated 0.47665573 2.7123e-02 lowCoverage 3.9225e-01 lowCoverage 0.905333 0.921569 -0.00518652 5 0.9137549 0.942485 -0.0287302 8.8266e-01 6.0552e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 8.7164e-01 1.2500e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02053835 2.1031e-01 lowCoverage 1.0000000 lowCoverage 0.897436 0.2065217 6.7630e-01 5 0.896722 0.2827821 0.61393978 5.4070e-26 1.000000 hypermethylated 2.4577e-24 1 hypermethylated 3.9706e-05 0.999614 hypermethylated 8.2557e-04 1 hypermethylated 0.4297143 3.8016e-02 lowCoverage 4.4091e-01 lowCoverage 0.897436 0.9215686 -0.02693340 5 0.8967219 0.9424851 -0.04576318 6.7153e-01 2.1044e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 8.9597e-01 4.6187e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant -0.0674798 8.1077e-02 lowCoverage 1.0000000 lowCoverage 0.2065217 0.9215686 -0.6480084 4 0.2827821 0.9424851 -0.65970297 1.0000e+00 6.6833e-13 lowCoverage 1.0000e+00 2.9058e-11 lowCoverage 0.9999999 1.7121e-04 lowCoverage 1.00000 4.6274e-03 lowCoverage -0.4971941 2.3355e-02 lowCoverage 3.1993e-01 lowCoverage chr6 160074729 160075729 25282 WTAP ENSG00000146457 0.749832 307 9 0.6774501 151 9 0.5536227 183 9 0.8203869 186 9 0.5799933 143 9 0.725419 254 10 0.552089 179 9 0.6744191 224 10 0.589741 169 9 0.666781 243 10 0.6871522 312 10 0.604587 220 9 0.6557467 288 9 0.74545 101 9 0.746045 224 9 0.583639 167 9 0.419181 179 10 0.7505961 251 10 0.619246 130 9 0.6472732 243 10 0.6192940 176 10 0.7972260 141 10 0.616942 159 9 0.632144 147 10 0.8006327 99 10 0.7207212 243 9 0.6703036 134 9 0.579996 132 9 0.650292 227 9 0.6734506 222 10 0.6493014 232 10 0.676903 324 10 0.5550088 258 10 0.632549 133 9 0.6601607 233 9 0.4987374 40 3 0.611737 184 9 0.63748571 245 10 0.7133319 258 10 0.7080749 269 9 0.8020586 215 9 0.6983116 233 9 0.761262 220 9 0.7850051 0.649693 0.5504013 0.8144949 0.5895263 0.706235 0.588101 0.6874263 0.585197 0.672529 0.680876 0.570206 0.6812653 0.75738 0.733816 0.579175 0.4220513 0.7593602 0.649040 0.6695867 0.586268 0.7857104 0.575266 0.665809 0.8610747 0.7268304 0.6805578 0.562463 0.628250 0.7251206 0.6605141 0.682822 0.6070853 0.6010606 0.65402123 0.5557010 0.567731 0.6201471 0.7130856 0.6839290 0.7919199 0.6774662 0.847589 9 0.657679 0.669946 -6.2142e-03 9 0.658740 0.6638619 -0.00512192 0.76679439 0.08122102 insignificant 1.00000 1.000000 insignificant 0.9512114 0.05106969 insignificant 1 1.00000 insignificant -0.0215013 0.4593356 insignificant 1.00000 insignificant 0.657679 0.6020128 0.0557688 9 0.658740 0.6070651 0.05167493 1.1498e-02 0.9969057 weaklyHypermeth 1.0266e-01 1.00000 insignificant 5.2040e-02 0.936886 insignificant 5.1258e-01 1 insignificant 0.05315289 1.2502e-01 insignificant 1.0000e+00 insignificant 0.657679 0.717992 -0.07669745 9 0.6587400 0.742850 -0.0841103 9.9999e-01 8.2666e-04 weaklyHypometh 1.0000e+00 5.9047e-02 weaklyHypometh 1.0000e+00 3.0189e-04 weaklyHypometh 1.0000e+00 3.3543e-02 weaklyHypometh -0.08417512 1.0534e-02 weaklyHypometh 0.3398186 insignificant 0.669946 0.6020128 6.4666e-02 9 0.663862 0.6070651 0.05679685 1.2899e-03 0.995620 weaklyHypermeth 1.3723e-02 1 weaklyHypermeth 1.4330e-02 0.993350 weaklyHypermeth 1.6471e-01 1 insignificant 0.0746541 3.7741e-02 weaklyHypermeth 4.4091e-01 insignificant 0.669946 0.7179916 -0.07205791 9 0.6638619 0.7428503 -0.07898840 9.9183e-01 3.4673e-03 weaklyHypometh 1.0000e+00 3.8526e-01 insignificant 9.9390e-01 9.6852e-03 weaklyHypometh 1.0000e+00 0.7982107 insignificant -0.0626739 4.4306e-02 weaklyHypometh 1.0000000 insignificant 0.6020128 0.7179916 -0.1338275 9 0.6070651 0.7428503 -0.13578525 1.0000e+00 1.1627e-06 weaklyHypometh 1.0000e+00 2.9068e-05 weaklyHypometh 0.9999910 2.5584e-05 weaklyHypometh 1.00000 1.0660e-03 weaklyHypometh -0.1373280 1.9479e-03 weaklyHypometh 5.4110e-02 weaklyHypometh chr6 161561429 161562429 25319 MAP3K4 ENSG00000085511 0.781617 188 7 0.6112522 211 7 0.7035306 86 7 0.7727204 189 7 0.7397341 76 6 0.628616 244 7 0.705782 64 6 0.7466819 142 7 0.704471 75 6 0.763806 89 7 0.7814067 194 7 0.651020 34 4 0.8496241 131 7 0.84921 74 7 0.789545 108 7 0.666667 11 0 0.750000 18 1 0.7004816 209 6 0.715248 118 7 0.5632290 161 7 0.5833333 30 2 0.9046784 47 4 0.679012 82 5 0.797959 70 7 0.8278509 68 5 0.6541422 169 7 0.7064076 57 4 0.654018 49 4 0.682940 131 7 0.5645823 292 7 0.7500607 183 7 0.627461 225 6 0.6442375 128 7 0.509941 60 6 0.7703879 139 5 0.7285714 31 3 0.738796 78 7 0.68178739 150 7 0.7241786 191 7 0.7148561 133 6 0.6629591 164 6 0.8203463 98 6 0.742598 179 7 0.8369928 0.779176 0.7461073 0.8354789 0.7800346 0.783958 0.792341 0.7954214 0.739110 0.800003 0.820098 0.735619 0.8761209 0.90741 0.842997 0.752438 0.8064668 0.7922702 0.820471 0.7850621 0.773333 0.8928057 0.815556 0.855143 0.8519298 0.7953150 0.7798529 0.820476 0.824385 0.7973342 0.8072700 0.846713 0.7102411 0.7501106 0.82273921 0.7900000 0.799375 0.8348724 0.8050635 0.8173647 0.8342643 0.8678788 0.826920 1 0.804707 0.832502 -8.1155e-03 7 0.639136 0.5506637 0.08847266 0.78904388 0.66642392 insignificant 1.00000 1.000000 insignificant 0.9663657 0.38189977 insignificant 1 1.00000 insignificant 0.0210282 0.5394191 insignificant 1.00000 insignificant 0.804626 0.7474403 0.0293036 7 0.603050 0.6358213 -0.03277139 6.1594e-02 0.8606760 insignificant 4.5625e-01 1.00000 insignificant 2.4338e-01 0.580217 insignificant 1.0000e+00 1 insignificant 0.04477849 3.2008e-01 insignificant 1.0000e+00 insignificant 0.806894 0.847059 -0.03456993 6 0.6585744 0.657562 0.0010121 7.7372e-01 4.5220e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.3236e-01 9.9146e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00925557 7.6941e-01 insignificant 1.0000000 insignificant 0.833690 0.7474403 3.2314e-02 7 0.605730 0.6358213 -0.03009131 2.2361e-01 0.876571 insignificant 1.0000e+00 1 insignificant 3.0545e-01 0.844875 insignificant 1.0000e+00 1 insignificant 0.0237503 6.3215e-01 insignificant 1.0000e+00 insignificant 0.838849 0.8470588 -0.02535924 6 0.7071625 0.6575622 0.04960030 5.6328e-01 1.4395e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.4830e-01 6.2568e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0302838 4.4867e-01 insignificant 1.0000000 insignificant 0.7534483 0.8470588 -0.0527946 6 0.7531100 0.6575622 0.09554777 9.0589e-01 5.4084e-02 insignificant 1.0000e+00 4.7442e-01 insignificant 0.8020869 3.0280e-01 insignificant 1.00000 1.0000e+00 insignificant -0.0540341 2.7340e-01 insignificant 1.0000e+00 insignificant chr6 161779729 161780729 25332 AGPAT4 ENSG00000026652 0.831517 1119 13 0.7839869 936 13 0.7155041 373 13 0.8876202 930 13 0.8152269 227 13 0.810253 1210 14 0.785973 380 13 0.8406432 406 14 0.799820 458 13 0.853060 300 10 0.8086239 628 14 0.833451 188 12 0.6587543 442 9 0.72538 170 11 0.743221 391 12 0.854222 125 7 0.658439 649 7 0.6049972 1135 13 0.731435 618 13 0.8589709 922 14 0.6755950 140 11 0.6244910 272 9 0.854908 537 13 0.829323 225 12 0.7278098 247 13 0.8115265 695 13 0.6415128 303 12 0.676617 180 11 0.697627 615 13 0.6715067 1224 13 0.7766228 734 13 0.868253 931 13 0.2400729 728 13 0.197246 344 13 0.2838440 806 12 0.0659361 93 8 0.373594 499 13 0.56261475 830 13 0.6735571 1084 13 0.7743370 909 13 0.8009780 1183 13 0.8564021 692 13 0.536522 900 13 0.8236616 0.740160 0.6335980 0.8749709 0.7385444 0.871685 0.793348 0.8135680 0.763715 0.812381 0.850873 0.793036 0.6283912 0.82513 0.687794 0.816777 0.7012848 0.5502237 0.765639 0.8357598 0.754174 0.5614950 0.835660 0.799145 0.6632144 0.7637821 0.6366135 0.805256 0.716355 0.6917351 0.7183418 0.833326 0.1065165 0.0900069 0.11540739 0.1663198 0.159937 0.5831226 0.6290235 0.7170073 0.7873392 0.8211142 0.419080 8 0.781253 0.772220 2.7758e-03 13 0.730101 0.7159893 0.01411205 0.45229119 0.73134522 insignificant 1.00000 1.000000 insignificant 0.0807542 0.99787340 insignificant 1 1.00000 insignificant 0.0420724 0.1788531 insignificant 1.00000 insignificant 0.781253 0.3377805 0.4206706 13 0.730101 0.3792084 0.35089288 9.2583e-47 0.9867988 hypermethylated 6.1722e-45 1.00000 hypermethylated 2.4109e-23 0.999998 hypermethylated 4.0182e-21 1 hypermethylated 0.49283709 5.8256e-04 hypermethylated 1.6182e-02 hypermethylated 0.781533 0.731487 0.05114814 13 0.7808301 0.712614 0.0682165 1.0187e-02 7.3637e-01 weaklyHypermeth 2.6807e-01 1.0000e+00 insignificant 1.1317e-02 9.9660e-01 weaklyHypermeth 3.7722e-01 1.0000e+00 insignificant 0.05169575 4.2246e-01 insignificant 1.0000000 insignificant 0.772220 0.3377805 4.2183e-01 13 0.715989 0.3792084 0.33678083 8.1248e-37 0.994255 hypermethylated 4.7793e-35 1 hypermethylated 2.9427e-17 0.999261 hypermethylated 3.6783e-15 1 hypermethylated 0.4507647 6.8693e-04 hypermethylated 1.8397e-02 hypermethylated 0.772817 0.7315436 0.04807636 13 0.7859441 0.7317727 0.05417142 9.7878e-02 8.1343e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.2314e-01 9.4832e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0096234 8.8138e-01 insignificant 1.0000000 insignificant 0.3377845 0.7314873 -0.3640904 13 0.3619525 0.7126136 -0.35066110 1.0000e+00 1.8310e-15 hypomethylated 1.0000e+00 9.1548e-14 hypomethylated 0.9999901 1.7021e-10 hypomethylated 1.00000 1.7594e-08 hypomethylated -0.4411413 8.0624e-04 hypomethylated 2.8579e-02 hypomethylated chr6 166338829 166339829 25377 ENSG00000176424 0.472919 413 9 0.4213703 303 9 0.6662212 164 9 0.4692929 368 9 0.6668325 123 7 0.455680 501 9 0.632795 260 9 0.6976119 188 9 0.531152 191 9 0.521109 128 9 0.6031841 311 9 0.665276 163 9 0.5197529 157 7 0.52844 51 5 0.559609 160 9 0.562787 91 9 0.603158 98 5 0.2657700 329 9 0.564550 180 7 0.4051381 299 9 0.5729737 106 9 0.0928857 146 5 0.326656 259 9 0.244600 117 9 0.5545386 312 9 0.5416717 251 9 0.4251584 225 9 0.452332 90 9 0.548914 135 7 0.5460407 465 9 0.5209664 328 9 0.452373 374 9 0.1576825 271 9 0.221613 201 9 0.1298701 251 7 0.0924804 189 9 0.150713 227 9 0.10922091 349 9 0.1966034 507 9 0.1919267 401 9 0.2598595 440 9 0.4388743 307 7 0.169799 562 9 0.4879192 0.420242 0.6408541 0.4767541 0.6448040 0.408734 0.623211 0.6394922 0.538838 0.567182 0.569318 0.636174 0.4189646 0.58163 0.492406 0.498319 0.5551861 0.2613986 0.484620 0.4068414 0.593140 0.1262082 0.407907 0.266944 0.5188076 0.4869364 0.3524138 0.551138 0.459605 0.5221709 0.4553743 0.423375 0.1356672 0.1774739 0.04290186 0.0563603 0.131825 0.0971935 0.2160665 0.1901616 0.2385506 0.2967119 0.151583 7 0.449308 0.413043 5.0484e-02 9 0.466700 0.3544760 0.11222393 0.12138109 0.99980043 insignificant 1.00000 1.000000 insignificant 0.0046633 0.99999979 weaklyHypermeth 1 1.00000 insignificant 0.1007067 0.0550763 insignificant 1.00000 insignificant 0.449385 0.1115591 0.3474288 9 0.460040 0.1243301 0.33570981 1.9342e-34 1.0000000 hypermethylated 8.0592e-33 1.00000 hypermethylated 1.1024e-18 1.000000 hypermethylated 1.2249e-16 1 hypermethylated 0.39703609 1.9239e-11 hypermethylated 1.6032e-09 hypermethylated 0.449385 0.192603 0.26872618 9 0.4600399 0.199332 0.2607082 2.1379e-22 1.0000e+00 hypermethylated 7.1263e-20 1.0000e+00 hypermethylated 1.2347e-14 1.0000e+00 hypermethylated 3.0866e-12 1.0000e+00 hypermethylated 0.28922013 1.8217e-03 weaklyHypermeth 0.1214498 insignificant 0.413486 0.1115591 3.0284e-01 9 0.425371 0.1243301 0.30104109 1.2674e-23 1.000000 hypermethylated 4.8747e-22 1 hypermethylated 1.6313e-10 1.000000 hypermethylated 8.1564e-09 1 hypermethylated 0.2963294 1.6054e-05 hypermethylated 7.2974e-04 hypermethylated 0.413486 0.1926026 0.23212632 9 0.4253712 0.1993317 0.22603946 2.9442e-17 1.0000e+00 hypermethylated 4.9071e-15 1.0000e+00 hypermethylated 9.1510e-07 1.0000e+00 hypermethylated 1.1439e-04 1.0000000 hypermethylated 0.1885134 1.5795e-02 weaklyHypermeth 0.7897317 insignificant 0.1115591 0.1926026 -0.0656693 9 0.1243301 0.1993317 -0.07500162 9.8699e-01 1.0182e-05 weaklyHypometh 1.0000e+00 2.1663e-04 weaklyHypometh 0.9779840 8.4927e-05 weaklyHypometh 1.00000 2.8309e-03 weaklyHypometh -0.1078160 9.4110e-02 insignificant 9.7735e-01 insignificant chr6 166341929 166342929 25378 ENSG00000176424 0.007556 1043 19 0.0213864 415 16 0.0076908 433 16 0.0066945 659 19 0.0041667 215 16 0.013737 984 16 0.015984 452 16 0.0045883 443 16 0.016813 556 16 0.011225 453 16 0.0061422 390 16 0.021225 428 16 0.0055859 451 16 NA 0 0 0.021185 564 16 0.018666 410 16 0.012125 490 16 0.0047544 666 19 0.022423 257 16 0.0463505 706 16 0.0083333 136 15 0.0056933 490 16 0.017819 636 16 0.011458 234 16 0.0056933 290 16 0.0060923 679 16 0.0062657 325 16 0.024599 104 10 0.014824 376 16 0.0026213 925 16 0.0055535 597 16 0.015039 852 16 0.0204205 399 16 0.012309 356 16 0.1111111 295 7 0.0034722 304 16 0.012500 119 14 0.00091912 568 16 0.0504060 1247 19 0.0021053 950 19 0.0018581 919 19 0.0036370 1003 19 0.013293 1177 19 0.0090948 0.021051 0.0084211 0.0076708 0.0034276 0.018828 0.015366 0.0046849 0.018258 0.011846 0.006537 0.022269 0.0075393 NA 0.019561 0.017060 0.0135818 0.0044094 0.021144 0.0042493 0.008569 0.0060859 0.023697 0.010454 0.0049801 0.0073739 0.0069422 0.026554 0.017105 0.0029015 0.0059601 0.014622 0.0197961 0.0133825 0.05699342 0.0037846 0.010540 0.0011530 0.0056792 0.0025707 0.0023090 0.0048190 0.019239 16 0.011892 0.010276 1.9696e-03 16 0.010542 0.0087303 0.00181180 0.34129720 0.86007605 insignificant 1.00000 1.000000 insignificant 0.2898966 0.93757069 insignificant 1 1.00000 insignificant 0.0037882 0.2160635 insignificant 1.00000 insignificant 0.012051 0.0083293 0.0035869 16 0.012519 0.0086626 0.00385621 1.4871e-01 0.8581849 insignificant 1.0000e+00 1.00000 insignificant 1.7524e-01 0.912505 insignificant 1.0000e+00 1 insignificant -0.01266772 4.9488e-01 insignificant 1.0000e+00 insignificant 0.011887 0.007371 0.00503709 16 0.0091046 0.051754 -0.0426498 3.5176e-01 9.9866e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.4848e-01 9.8768e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00013900 9.8903e-01 insignificant 1.0000000 insignificant 0.010282 0.0083293 1.6374e-03 16 0.010367 0.0086626 0.00170470 2.9333e-01 0.686549 insignificant 1.0000e+00 1 insignificant 3.9191e-01 0.658003 insignificant 1.0000e+00 1 insignificant -0.0164560 3.8186e-01 insignificant 1.0000e+00 insignificant 0.010276 0.0071861 0.00319137 16 0.0087303 0.0072945 0.00143580 3.4202e-01 8.4733e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.8124e-01 6.9686e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0039272 6.9800e-01 insignificant 1.0000000 insignificant 0.0083293 0.0073036 0.0019920 16 0.0086626 0.0078061 0.00085648 7.5369e-01 9.9145e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.9859120 9.5445e-01 insignificant 1.00000 1.0000e+00 insignificant 0.0125287 5.3873e-01 insignificant 1.0000e+00 insignificant chr6 166666129 166667129 25387 PRR18 ENSG00000176381 0.876437 533 10 0.7348327 231 8 0.6353065 136 10 0.8936140 500 10 0.8712121 82 4 0.828057 509 10 0.811389 110 7 0.8251742 197 10 0.813117 134 8 0.907836 161 10 0.9144399 283 10 0.751233 71 9 0.8481146 291 10 0.73016 26 2 0.874081 165 8 0.822917 22 1 0.688095 48 3 0.8259888 599 10 0.863708 177 8 0.8274277 439 10 0.7524667 139 9 0.7302403 201 10 0.845558 283 10 0.777663 88 8 0.8344156 161 8 0.8519649 292 10 0.6538067 165 9 0.618687 53 6 0.762963 207 8 0.9211946 499 10 0.8035399 260 10 0.873997 481 10 0.7450194 167 10 0.870673 174 10 0.9665628 378 10 0.9223077 64 5 0.682900 111 11 0.86567643 291 10 0.8578287 391 10 0.9180512 432 9 0.8819725 545 10 0.8901597 325 8 0.897897 543 10 0.8749837 0.745584 0.6700468 0.8898000 0.9328431 0.907379 0.754695 0.8302438 0.757219 0.886656 0.873742 0.684936 0.9078141 0.77158 0.899766 0.848265 0.7492904 0.9048912 0.879132 0.8936551 0.776537 0.7918749 0.838322 0.845182 0.9004720 0.9170385 0.7581211 0.652048 0.852702 0.8967363 0.8665548 0.880226 0.8196145 0.8666541 0.97777912 0.9479336 0.752935 0.8296398 0.8698178 0.9095013 0.8695589 0.8989155 0.915240 4 0.862961 0.855779 3.0248e-03 10 0.820474 0.7982606 0.02221350 0.16583761 0.93767033 insignificant 1.00000 1.000000 insignificant 0.2726280 0.89882028 insignificant 1 1.00000 insignificant 0.0316156 0.3134124 insignificant 1.00000 insignificant 0.862961 0.8843882 -0.0242239 10 0.820474 0.8242353 -0.00376124 7.0095e-01 0.0849629 insignificant 1.0000e+00 1.00000 insignificant 9.0936e-01 0.037157 weaklyHypometh 1.0000e+00 1 insignificant -0.02503288 6.1228e-01 insignificant 1.0000e+00 insignificant 0.864836 0.892665 -0.02851209 10 0.8712715 0.888620 -0.0173483 9.2678e-01 1.7262e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.0623e-01 7.2078e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.07202479 1.1893e-03 weaklyHypometh 0.0849532 weaklyHypometh 0.855779 0.8843882 -2.9345e-02 10 0.798261 0.8242353 -0.02597475 9.6746e-01 0.120643 insignificant 1.0000e+00 1 insignificant 9.9429e-01 0.048500 weaklyHypometh 1.0000e+00 1 insignificant -0.0566485 2.9636e-01 insignificant 1.0000e+00 insignificant 0.861934 0.8926655 -0.03208106 10 0.8588559 0.8886198 -0.02976393 9.9627e-01 3.0991e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9922e-01 1.1454e-02 weaklyHypometh 1.0000e+00 0.7982107 insignificant -0.1036404 2.1477e-03 weaklyHypometh 0.2339790 insignificant 0.8887001 0.8926655 -0.0040125 10 0.8816588 0.8886198 -0.00696094 5.6504e-01 6.6054e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.6696885 8.2733e-01 insignificant 1.00000 1.0000e+00 insignificant -0.0469919 3.4094e-01 insignificant 1.0000e+00 insignificant chr6 166889829 166890829 25395 RPS6KA2 ENSG00000071242 0.910488 338 8 0.7770911 189 8 0.8224638 106 8 0.8098479 324 8 0.9094203 75 8 0.883238 392 8 0.803766 87 5 0.9360685 206 8 0.784211 80 5 0.764881 86 5 0.9594906 386 8 0.874396 75 5 0.9875000 184 5 0.77705 87 5 0.773818 170 5 0.758690 57 2 0.500000 3 0 0.7335672 457 7 0.869861 279 5 0.8789394 264 9 0.8254605 61 4 0.7583333 81 4 0.911082 129 8 0.906667 108 9 0.9109845 351 8 0.9282609 305 8 0.7000638 139 6 0.560606 58 7 0.862671 242 8 0.8647775 358 8 0.9595743 223 8 0.776256 290 8 0.5746732 212 8 0.403409 164 8 0.5966799 383 5 0.1428571 46 5 0.613138 107 9 0.21293703 277 8 0.8440877 296 8 0.9114379 146 5 0.9566799 271 8 0.9759080 215 5 0.784188 238 8 0.9333084 0.854886 0.8581955 0.9241497 0.7783122 0.940557 0.895233 0.9302398 0.965068 0.923396 0.941839 0.935937 0.9849083 0.87331 0.936164 0.923992 NA 0.8673790 0.922839 0.9462658 0.958818 0.9312316 0.922314 1.000000 0.9151931 0.9082660 0.9180127 0.836578 0.901075 0.9600479 0.9353429 0.959466 0.7392526 0.4305243 0.54366743 0.1599829 0.600131 0.2656491 0.9250132 0.8574961 0.9260228 0.9250873 0.848552 2 0.913654 0.929060 -1.7584e-02 8 0.780408 0.7401137 0.04029389 0.94419849 0.04358272 weaklyHypometh 1.00000 1.000000 insignificant 0.6963253 0.46180493 insignificant 1 1.00000 insignificant -0.0046553 0.9101380 insignificant 1.00000 insignificant 0.913654 0.4713805 0.4384592 8 0.780408 0.4428690 0.33753859 5.4528e-44 1.0000000 hypermethylated 3.4080e-42 1.00000 hypermethylated 1.2456e-16 0.999998 hypermethylated 9.5814e-15 1 hypermethylated 0.40179039 4.0082e-03 weaklyHypermeth 8.5281e-02 weaklyHypermeth 0.913869 0.909013 0.00527934 8 0.8084483 0.844369 -0.0359204 6.1447e-01 1.0983e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.5129e-01 5.1738e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.06872097 1.4758e-01 insignificant 1.0000000 insignificant 0.928328 0.4718251 4.6151e-01 8 0.720104 0.4892966 0.23080764 7.8816e-32 0.999989 hypermethylated 4.3787e-30 1 hypermethylated 4.1244e-13 0.999973 hypermethylated 2.9460e-11 1 hypermethylated 0.4064457 3.2567e-03 weaklyHypermeth 7.0798e-02 weaklyHypermeth 0.929457 0.9090129 0.02291884 8 0.8141251 0.8443688 -0.03024371 2.6714e-01 6.5805e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.0335e-01 7.6168e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0640657 2.1555e-01 insignificant 1.0000000 insignificant 0.4709351 0.9090129 -0.4436854 8 0.3871559 0.8443688 -0.45721288 1.0000e+00 4.3284e-16 hypomethylated 1.0000e+00 2.5461e-14 hypomethylated 1.0000000 9.7005e-10 hypomethylated 1.00000 7.5820e-08 hypomethylated -0.4705114 1.5224e-03 weaklyHypometh 4.6132e-02 weaklyHypometh chr6 167262429 167263429 25420 RPS6KA2 ENSG00000071242 0.937255 103 5 0.7081349 55 5 0.9366667 88 5 0.8254545 25 2 0.8743590 44 5 0.784403 49 2 0.940000 61 5 0.9671827 48 2 0.794615 40 2 0.933333 43 3 0.9455556 115 5 0.940659 58 5 0.9211111 66 5 NA 0 0 0.898551 55 2 0.880000 41 5 0.618095 39 3 0.7000000 19 0 0.945378 72 5 0.6899015 67 2 0.6666667 22 2 0.7410714 19 2 0.920308 93 5 0.400000 7 0 NA 0 0 1.0000000 36 5 0.5666667 18 2 0.700000 10 0 0.750000 19 2 0.8351515 55 5 0.9428571 39 5 0.891304 46 2 0.5093685 68 5 0.868571 48 5 0.0000000 2 0 1.0000000 7 0 0.600000 15 0 1.00000000 14 1 0.8778355 72 5 0.9205882 115 5 0.8757576 40 5 0.7761905 97 5 0.828571 23 2 0.9288425 0.906778 0.8467742 0.8035191 0.7766749 0.749899 0.854839 0.9206032 0.857940 0.935484 0.868280 0.856434 0.9430108 NA 0.905096 0.987097 0.8341014 0.7419355 0.934671 0.8514222 0.967742 0.7276412 0.903970 0.967742 NA 1.0000000 0.6451613 0.983871 0.879032 0.9183773 1.0000000 0.881668 0.6238563 0.8264209 0.86317371 0.9838710 0.978495 1.0000000 0.7528278 0.8683586 0.7746823 0.6958525 0.585253 0 0.885110 0.879121 5.4912e-03 2 0.890773 0.8567741 0.03399864 0.21100857 0.57536022 lowCoverage 1.00000 1.000000 lowCoverage 0.2038404 0.28300034 lowCoverage 1 1.00000 lowCoverage 0.0898600 0.1512076 lowCoverage 1.00000 lowCoverage 0.885110 0.7077922 0.1778387 2 0.890773 0.6715360 0.21923673 4.7540e-07 0.9999604 lowCoverage 6.8898e-06 1.00000 lowCoverage 8.7098e-02 0.637202 lowCoverage 8.0647e-01 1 lowCoverage 0.19178137 2.7826e-01 lowCoverage 1.0000e+00 lowCoverage 0.885110 0.829971 0.06372759 5 0.8907727 0.859132 0.0316403 9.6108e-04 8.0398e-01 weaklyHypermeth 3.8443e-02 1.0000e+00 weaklyHypermeth 1.4029e-02 5.2915e-01 weaklyHypermeth 4.5255e-01 1.0000e+00 insignificant -0.00101728 9.7719e-01 lowCoverage 1.0000000 lowCoverage 0.879121 0.7077922 1.6483e-01 2 0.856774 0.6715360 0.18523809 2.2522e-03 0.999816 lowCoverage 2.3218e-02 1 lowCoverage 5.6018e-01 0.879718 lowCoverage 1.0000e+00 1 lowCoverage 0.1019214 5.6032e-01 lowCoverage 1.0000e+00 lowCoverage 0.879121 0.8299712 0.06587931 2 0.8567741 0.8591324 -0.00235837 2.0278e-02 4.9668e-01 lowCoverage 5.0694e-01 1.0000e+00 lowCoverage 6.5593e-02 1.9302e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage -0.0908772 1.4864e-01 lowCoverage 1.0000000 lowCoverage 0.7077922 0.8299712 -0.1162762 2 0.6715360 0.8591324 -0.18759646 9.3744e-01 7.2338e-03 lowCoverage 1.0000e+00 7.6955e-02 lowCoverage 0.2539334 1.0916e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage -0.1927986 2.7602e-01 lowCoverage 1.0000e+00 lowCoverage chr6 167574629 167575629 25426 ENSG00000216966 0.753200 269 5 0.8641656 224 8 0.8909375 157 7 0.8311385 250 8 0.9266234 59 5 0.859177 304 7 0.782449 147 5 0.8454230 149 7 0.856764 129 5 0.890422 159 5 0.8523915 181 8 0.862278 71 5 0.9087595 190 5 NA 0 0 0.764861 116 5 0.896259 58 5 0.887295 79 5 0.7397303 216 5 0.841571 127 7 0.8987363 237 5 0.8071429 50 5 0.5816945 135 5 0.824017 245 6 0.785937 62 5 0.8172619 102 8 0.9217442 203 8 0.9495551 132 5 0.875000 58 5 0.773357 138 5 0.7330307 332 10 0.8826763 261 8 0.872954 227 5 0.3574063 198 8 0.214286 81 5 0.5427273 196 10 0.6154101 112 10 0.324290 92 8 0.47845002 226 8 0.4065656 278 5 0.7740415 192 5 0.8871108 219 7 0.4625074 253 5 0.550694 269 7 0.8028337 0.822542 0.8236607 0.8247536 0.8775580 0.811583 0.857579 0.8334692 0.795398 0.888726 0.876907 0.805904 0.8724611 NA 0.763086 0.854122 0.8882544 0.6326888 0.740640 0.8377105 0.747700 0.4156844 0.839458 0.707292 0.7302489 0.8074995 0.9159588 1.000000 0.731080 0.7513676 0.7951192 0.881100 0.2723873 0.2840909 0.43560606 0.4740801 0.220117 0.2414824 0.2722542 0.5857059 0.7222343 0.4623806 0.443542 5 0.834081 0.826042 2.3745e-02 5 0.873571 0.8327150 0.04085576 0.61832655 0.19659587 insignificant 1.00000 1.000000 insignificant 0.4680000 0.93671617 insignificant 1 1.00000 insignificant 0.0314172 0.3233682 insignificant 1.00000 insignificant 0.834081 0.3988950 0.4960731 5 0.873571 0.4986157 0.37495510 5.2638e-41 0.9961374 hypermethylated 3.0964e-39 1.00000 hypermethylated 9.2334e-13 0.999996 hypermethylated 4.6167e-11 1 hypermethylated 0.42801986 7.2301e-04 hypermethylated 1.8539e-02 hypermethylated 0.834081 0.488026 0.30095895 5 0.8735708 0.682115 0.1914555 1.4378e-18 9.7561e-01 hypermethylated 1.7972e-16 1.0000e+00 hypermethylated 1.4256e-07 9.9893e-01 hypermethylated 1.5840e-05 1.0000e+00 hypermethylated 0.23393089 6.3642e-02 insignificant 1.0000000 insignificant 0.826042 0.3988950 4.6085e-01 8 0.832715 0.4986157 0.33409933 4.2611e-25 0.999999 hypermethylated 1.7755e-23 1 hypermethylated 6.4909e-11 1.000000 hypermethylated 3.6060e-09 1 hypermethylated 0.3966026 5.4215e-04 hypermethylated 1.6396e-02 hypermethylated 0.826042 0.4880264 0.26654008 5 0.8327150 0.6821153 0.15059973 5.2411e-07 9.8061e-01 hypermethylated 2.9117e-05 1.0000e+00 hypermethylated 8.2829e-05 9.6696e-01 hypermethylated 5.5220e-03 1.0000000 hypermethylated 0.2025137 9.2516e-02 insignificant 1.0000000 insignificant 0.3988950 0.4880264 -0.1874638 5 0.4986157 0.6821153 -0.18349961 9.8959e-01 7.5144e-07 weaklyHypometh 1.0000e+00 1.9268e-05 weaklyHypometh 0.9952941 1.6858e-04 weaklyHypometh 1.00000 4.6274e-03 weaklyHypometh -0.1940890 1.2180e-01 insignificant 1.0000e+00 insignificant chr6 167833743 167834743 25429 ENSG00000203689 0.946924 219 6 0.7967132 285 8 0.8222304 241 8 0.9315587 124 4 0.8465110 168 6 0.778954 196 6 0.824791 242 6 0.8842725 211 6 0.715774 186 6 0.904779 129 6 0.8904869 377 8 0.611224 176 6 0.6889691 238 6 0.50000 8 1 0.811933 176 6 0.721382 115 6 0.480638 114 6 0.6999279 137 4 0.775352 249 6 0.9025794 147 6 0.8106443 82 6 0.6449013 51 3 0.852777 180 6 0.698098 67 5 0.7673611 76 2 0.8605357 265 8 0.8706349 86 6 0.751299 56 4 0.887368 216 6 0.8950686 435 8 0.9149277 291 8 0.881540 175 5 0.7941967 260 7 0.805297 189 6 0.6152476 148 4 0.8259259 62 4 0.914435 106 6 0.81622959 253 6 0.8799670 151 4 0.8762957 183 6 0.8499566 169 4 0.6370435 185 4 0.913194 84 4 0.9182508 0.760673 0.7798874 0.9121399 0.7540486 0.849506 0.813808 0.8060398 0.762388 0.916929 0.871930 0.553994 0.7907083 NA 0.839243 0.677701 0.5182884 0.8847535 0.928673 0.8668081 0.924733 0.5304052 0.823100 0.774864 0.9338814 0.8625813 0.9005432 0.766127 0.874194 0.9007697 0.9000514 0.858543 0.8025129 0.8009179 0.48289888 0.8579758 0.918818 0.7915495 0.9249832 0.8811754 0.8618782 0.7727999 0.823639 3 0.809256 0.872663 -6.2535e-02 6 0.818707 0.8558627 -0.03715528 0.98388458 0.00493203 weaklyHypometh 1.00000 0.328802 insignificant 0.9644818 0.01457374 weaklyHypometh 1 1.00000 insignificant -0.0428462 0.2761452 insignificant 1.00000 insignificant 0.809256 0.7485265 0.0573546 6 0.818707 0.7839797 0.03472767 1.0119e-02 0.9526779 weaklyHypermeth 9.1989e-02 1.00000 weaklyHypermeth 5.4585e-01 0.601390 insignificant 1.0000e+00 1 insignificant -0.01847188 7.1759e-01 insignificant 1.0000e+00 insignificant 0.809256 0.854922 -0.03752037 4 0.8187074 0.841049 -0.0223418 8.4318e-01 4.2793e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.7874e-01 8.7269e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.05454148 3.7566e-01 lowCoverage 1.0000000 lowCoverage 0.872663 0.7485265 1.2496e-01 6 0.855863 0.7839797 0.07188294 4.2421e-04 0.974445 weaklyHypermeth 4.9327e-03 1 weaklyHypermeth 1.9024e-01 0.603254 insignificant 1.0000e+00 1 insignificant 0.0243743 6.1738e-01 insignificant 1.0000e+00 insignificant 0.872663 0.8549223 0.02047695 4 0.8558627 0.8410492 0.01481344 3.4459e-01 5.7175e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.5056e-01 5.6804e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage -0.0116953 8.3982e-01 lowCoverage 1.0000000 lowCoverage 0.7485265 0.8549223 -0.0546814 4 0.7839797 0.8410492 -0.05706950 7.7443e-01 3.1634e-02 lowCoverage 1.0000e+00 2.8499e-01 lowCoverage 0.5768318 5.2724e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage -0.0360696 5.8669e-01 lowCoverage 1.0000e+00 lowCoverage chr6 169141243 169142243 25441 SMOC2 ENSG00000112562 0.937759 355 8 0.8307439 168 8 0.8691055 153 8 0.9192037 316 8 0.8504419 120 7 0.903766 497 8 0.939534 143 7 0.9646916 155 7 0.829949 189 8 0.910855 167 7 0.9527227 201 8 0.931104 93 8 0.9712998 206 8 0.89798 129 8 0.911477 217 8 0.952381 48 4 0.660000 24 1 0.9388752 342 8 0.928632 210 7 0.9206023 301 8 0.7037037 59 5 0.8138015 165 7 0.915805 152 8 0.877282 140 8 0.9136905 54 4 0.9016604 229 8 0.8904549 132 8 0.870693 101 6 0.896420 168 8 0.9482371 343 8 0.9501897 222 8 0.746942 356 8 0.7016097 218 8 0.877597 99 6 0.9419563 429 8 0.8163265 21 1 0.691185 179 8 0.77614245 264 8 0.9487523 280 8 0.9614522 254 8 0.9478251 269 7 0.9081799 261 8 0.939407 278 8 0.9328299 0.837615 0.8699771 0.9241611 0.8491357 0.895623 0.942298 0.9569889 0.826243 0.913014 0.937968 0.949534 0.9592264 0.87334 0.944318 0.886083 0.8058889 0.9177961 0.901457 0.9228013 0.873425 0.8890234 0.892121 0.900101 0.9578629 0.9161697 0.8910659 0.893977 0.874977 0.9313949 0.9497270 0.933005 0.8712069 0.8851296 0.84696878 0.8290534 0.861781 0.7615628 0.9312274 0.9631391 0.9187808 0.9051847 0.931785 5 0.914973 0.909391 1.3671e-03 8 0.938757 0.7252978 0.21345958 0.82467382 0.86621472 insignificant 1.00000 1.000000 insignificant 0.6032076 0.80221509 insignificant 1 1.00000 insignificant 0.0319832 0.2507173 insignificant 1.00000 insignificant 0.914952 0.8710744 0.0647779 8 0.932633 0.6935173 0.23911580 3.2407e-05 0.1433569 weaklyHypermeth 4.0509e-04 1.00000 weaklyHypermeth 1.3371e-02 0.095102 weaklyHypermeth 1.6306e-01 1 insignificant 0.10025348 5.5402e-02 insignificant 6.5954e-01 insignificant 0.914909 0.930700 -0.01856843 8 0.9157914 0.938289 -0.0224979 9.9292e-01 1.6989e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7124e-01 1.7577e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04006697 3.6631e-02 weaklyHypometh 0.8721559 insignificant 0.909735 0.8710744 6.4419e-02 8 0.731161 0.6935173 0.03764360 2.2575e-02 0.106940 weaklyHypermeth 1.8971e-01 1 insignificant 1.9851e-01 0.378224 insignificant 1.0000e+00 1 insignificant 0.0682703 1.7462e-01 insignificant 1.0000e+00 insignificant 0.911027 0.9307004 -0.01941638 8 0.9139511 0.9382892 -0.02433813 9.8045e-01 2.3436e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.5665e-01 1.2383e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0720501 9.3076e-03 weaklyHypometh 0.4898734 insignificant 0.8739635 0.9307004 -0.0817290 8 0.8668966 0.9382892 -0.07139263 7.5310e-03 8.9188e-03 weaklyHypometh 1.0000e+00 9.2904e-02 weaklyHypometh 0.1161257 2.3072e-02 weaklyHypometh 1.00000 2.6520e-01 insignificant -0.1403205 1.6526e-02 weaklyHypometh 2.5822e-01 insignificant chr6 169213943 169214943 25444 SMOC2 ENSG00000112562 0.901719 359 5 0.9189265 235 5 0.8511379 147 5 0.9268483 311 5 0.9404762 60 5 0.914574 271 5 0.887948 127 5 0.9080335 158 5 0.882277 106 5 0.964008 105 5 0.9221237 189 5 0.765873 58 4 0.9409023 180 4 0.87500 6 0 0.874881 147 5 0.744444 20 3 0.687500 28 4 0.9132267 275 5 0.925340 138 5 0.9325898 238 5 0.8000000 54 5 0.8985213 76 4 0.938283 196 5 0.785429 87 4 0.9283626 79 5 0.9292154 292 5 0.9171540 115 5 0.860606 55 5 0.867265 241 5 0.9429558 451 5 0.9320762 259 5 0.951481 255 5 0.9316364 153 5 0.983333 115 5 0.8128019 80 3 0.6548611 30 4 0.919231 80 5 0.90111111 269 5 0.9166786 394 5 0.9528662 361 5 0.9045228 339 5 0.9227775 295 5 0.920116 354 5 0.8906068 0.903061 0.8197885 0.9362640 0.9519797 0.905979 0.886213 0.8932293 0.852679 0.938060 0.936435 0.814339 0.9222670 0.91855 0.848268 0.800375 0.6993489 0.9020695 0.913179 0.9369740 0.829187 0.8688702 0.922815 0.824470 0.9598692 0.9308474 0.8882866 0.908750 0.848513 0.9372821 0.9253144 0.953764 0.9407763 0.9771268 0.78236439 0.6596726 0.907844 0.9550606 0.9200155 0.9466257 0.8900471 0.8998386 0.914448 4 0.902756 0.920370 -1.7642e-02 5 0.921357 0.8529824 0.06837465 0.97768334 0.23971627 insignificant 1.00000 1.000000 insignificant 0.5014742 0.44893864 insignificant 1 1.00000 insignificant -0.0120543 0.6004551 lowCoverage 1.00000 lowCoverage 0.902663 0.8899587 0.0108463 5 0.905629 0.8924548 0.01317373 3.9323e-01 0.6791892 insignificant 1.0000e+00 1.00000 insignificant 9.2317e-01 0.314446 insignificant 1.0000e+00 1 insignificant 0.01672902 7.5257e-01 lowCoverage 1.0000e+00 lowCoverage 0.902663 0.919105 -0.01550664 5 0.9056285 0.922719 -0.0170906 6.2279e-01 2.2137e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.3434e-01 2.5020e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03950077 3.7618e-02 lowCoverage 0.8748454 lowCoverage 0.920760 0.8899587 3.0327e-02 5 0.923579 0.8924548 0.03112415 2.3064e-01 0.843288 insignificant 1.0000e+00 1 insignificant 8.6109e-01 0.561089 insignificant 1.0000e+00 1 insignificant 0.0287833 5.9095e-01 lowCoverage 1.0000e+00 lowCoverage 0.920760 0.9191050 0.00274225 5 0.9235789 0.9227191 0.00085987 5.4722e-01 7.2551e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.3334e-01 7.6671e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0274465 1.4943e-01 lowCoverage 1.0000000 lowCoverage 0.8899587 0.9191050 -0.0283371 5 0.8924548 0.9227191 -0.03026429 7.9596e-01 3.9110e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.5708980 9.2375e-01 insignificant 1.00000 1.0000e+00 insignificant -0.0562298 2.9881e-01 lowCoverage 1.0000e+00 lowCoverage chr6 169990443 169991443 25452 C6orf70 ENSG00000130023 0.823277 421 14 0.7367014 651 14 0.8229877 291 13 0.7977799 404 13 0.7726025 163 11 0.845515 734 13 0.847548 266 13 0.7998947 464 13 0.780170 327 13 0.835184 197 13 0.8192960 643 13 0.724195 92 8 0.9230605 362 13 0.86610 214 12 0.884388 296 13 0.732251 75 7 0.870494 59 3 0.8393089 506 14 0.832061 401 13 0.8248587 650 14 0.8383411 176 10 0.7394834 236 11 0.802099 407 13 0.786970 244 13 0.8278666 129 11 0.8298572 571 14 0.7556702 275 13 0.717884 191 12 0.832902 419 13 0.8138272 1013 14 0.8122423 660 13 0.827221 797 14 0.6922899 489 13 0.518344 170 11 0.5812434 478 10 0.6179099 59 5 0.725033 597 13 0.66029833 625 13 0.8277303 497 13 0.8206715 404 13 0.8104714 366 13 0.9090479 279 12 0.848394 402 14 0.8943028 0.817566 0.8251869 0.8809260 0.8542825 0.893165 0.852782 0.8806748 0.841661 0.884394 0.890401 0.768197 0.9203759 0.93241 0.893017 0.775932 0.8736807 0.9029836 0.908272 0.8940964 0.876093 0.8151195 0.879804 0.874811 0.8491900 0.8952821 0.7756411 0.859725 0.891300 0.8912277 0.8906605 0.905253 0.7633767 0.5489926 0.68795572 0.7035221 0.768440 0.7545369 0.9143065 0.9059713 0.8832597 0.9256324 0.934753 8 0.876247 0.881204 2.9258e-03 13 0.830159 0.7649822 0.06517731 0.81960733 0.87199097 insignificant 1.00000 1.000000 insignificant 0.2049671 0.74043203 insignificant 1 1.00000 insignificant 0.0201867 0.2271187 insignificant 1.00000 insignificant 0.876230 0.6989247 0.1789387 13 0.818837 0.5852454 0.23359135 1.3187e-27 1.0000000 weaklyHypermeth 4.3958e-26 1.00000 weaklyHypermeth 4.1633e-10 1.000000 weaklyHypermeth 1.6013e-08 1 weaklyHypermeth 0.18636382 1.0450e-03 weaklyHypermeth 2.4882e-02 weaklyHypermeth 0.876196 0.907084 -0.02967166 13 0.8058966 0.831790 -0.0258939 9.8288e-01 6.1367e-03 weaklyHypometh 1.0000e+00 2.5569e-01 insignificant 9.8428e-01 5.9415e-03 weaklyHypometh 1.0000e+00 4.2439e-01 insignificant -0.02437941 2.7981e-01 insignificant 1.0000000 insignificant 0.881180 0.6989247 1.7239e-01 13 0.749314 0.5852454 0.16406889 2.5946e-18 1.000000 weaklyHypermeth 7.6313e-17 1 weaklyHypermeth 1.3808e-07 0.999996 weaklyHypermeth 4.9313e-06 1 weaklyHypermeth 0.1661771 1.9424e-03 weaklyHypermeth 4.7377e-02 weaklyHypermeth 0.881353 0.9070842 -0.03052196 13 0.8028368 0.8317905 -0.02895367 9.8771e-01 1.5457e-03 weaklyHypometh 1.0000e+00 2.4795e-01 insignificant 9.9432e-01 1.1947e-03 weaklyHypometh 1.0000e+00 0.2389426 insignificant -0.0445661 6.8597e-02 insignificant 1.0000000 insignificant 0.6995033 0.9070842 -0.2084706 13 0.6270487 0.8317905 -0.20474176 1.0000e+00 1.0512e-13 hypomethylated 1.0000e+00 4.7782e-12 hypomethylated 1.0000000 7.3914e-09 hypomethylated 1.00000 4.9276e-07 hypomethylated -0.2107432 4.0344e-04 hypomethylated 1.9211e-02 hypomethylated chr6 170377343 170378343 25453 ENSG00000218716 0.853849 186 6 0.8607485 89 3 0.7851459 84 3 0.9308271 137 5 0.9230769 29 2 0.913947 221 8 0.887879 44 3 0.8198983 56 3 0.820556 53 3 0.921296 52 3 0.8927035 124 3 0.962963 29 3 0.8642857 73 3 NA 0 0 0.966667 44 3 0.944444 12 1 0.566667 19 2 0.6886619 136 6 0.907377 148 6 0.9582681 131 6 0.8734127 53 3 0.6666667 10 0 0.941184 101 6 0.856061 23 2 1.0000000 12 1 0.8918975 151 6 0.8910256 37 3 1.000000 16 2 0.726556 75 3 0.9718637 222 6 0.9567240 165 9 0.761592 139 6 0.7372004 109 3 0.791980 40 3 0.7890497 466 8 0.9100529 105 5 0.976190 43 3 0.78965089 199 6 0.8383483 138 6 0.9302624 125 6 0.9237473 125 5 0.6007300 97 5 0.915409 118 8 0.9224030 0.886197 0.8521434 0.8578341 0.9590571 0.873566 0.896334 0.8079626 0.860538 0.939964 0.894009 0.980287 0.8730415 NA 0.982258 0.916667 0.6725806 0.9358679 0.980368 0.9440874 0.880472 0.7056452 0.954111 0.816349 1.0000000 0.8306652 0.9050868 1.000000 0.719979 0.9637037 0.9699821 0.931658 0.7151197 0.8515644 0.95890263 0.8333333 0.987327 0.9057411 0.8717156 0.8996032 0.9408602 0.8062257 1.000000 1 0.891161 0.920319 -2.7047e-02 6 0.756341 0.7633465 -0.00700545 0.90250157 0.50529662 insignificant 1.00000 1.000000 insignificant 0.9360144 0.86706774 insignificant 1 1.00000 insignificant -0.0112787 0.7752375 lowCoverage 1.00000 lowCoverage 0.891161 0.8440748 0.0546042 6 0.756341 0.6990272 0.05731383 9.7770e-02 0.9971453 insignificant 6.9835e-01 1.00000 insignificant 9.0189e-01 0.993232 insignificant 1.0000e+00 1 insignificant 0.03444912 4.4938e-01 lowCoverage 1.0000e+00 lowCoverage 0.893309 0.807629 0.05973868 6 0.9244168 0.867639 0.0567782 5.3694e-02 9.9451e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.6582e-01 9.9156e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02510379 7.2129e-01 lowCoverage 1.0000000 lowCoverage 0.920319 0.8440748 5.9283e-02 6 0.763347 0.6990272 0.06431928 3.9214e-01 0.999948 insignificant 1.0000e+00 1 insignificant 9.2743e-01 0.997035 insignificant 1.0000e+00 1 insignificant 0.0457278 3.6523e-01 lowCoverage 1.0000e+00 lowCoverage 0.922156 0.8076285 0.06506221 6 0.9329791 0.8676386 0.06534045 7.3614e-03 9.1865e-01 weaklyHypermeth 2.1033e-01 1.0000e+00 insignificant 6.8496e-02 9.3537e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0363825 6.2125e-01 lowCoverage 1.0000000 lowCoverage 0.8458333 0.8076285 -0.0272133 6 0.8543666 0.8676386 -0.01327201 6.2214e-01 2.5493e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.6827765 8.3493e-01 insignificant 1.00000 1.0000e+00 insignificant -0.0093453 9.0142e-01 lowCoverage 1.0000e+00 lowCoverage chr6 170589043 170590043 25455 FAM120B ENSG00000112584 0.671127 411 8 0.5325572 515 8 0.4593750 168 9 0.4861561 318 9 0.3601275 117 9 0.625197 385 9 0.468997 166 9 0.4271210 222 9 0.341727 142 9 0.676275 139 7 0.6754135 444 9 0.342063 65 8 0.1554187 120 9 0.55033 114 9 0.350875 199 9 0.495208 41 3 0.625000 5 0 0.3674690 481 9 0.387687 314 9 0.3145810 446 8 0.5617740 91 9 0.1837607 69 5 0.616662 203 9 0.466534 152 9 0.6146542 144 8 0.5152271 473 8 0.4946360 136 8 0.605308 94 6 0.631342 369 8 0.3763020 1030 9 0.2714763 591 9 0.811055 383 8 0.0018939 432 8 0.022222 235 9 0.1071208 433 7 0.0000000 51 5 0.138599 538 9 0.07067067 582 9 0.0912651 575 9 0.2298559 370 9 0.1584002 416 9 0.0807984 305 9 0.212757 328 9 0.6750673 0.544228 0.5195037 0.5168579 0.4008111 0.640810 0.492448 0.4350506 0.369804 0.666488 0.710247 0.356782 0.1747548 0.57527 0.350574 0.526634 NA 0.3575703 0.355421 0.3647298 0.632467 0.1881637 0.627780 0.535454 0.6402477 0.5396373 0.5291613 0.697829 0.648526 0.3972389 0.3030133 0.828824 0.0218953 0.0134680 0.09051679 0.0000000 0.047361 0.0470774 0.0961083 0.0583201 0.1497449 0.0902132 0.203070 5 0.485762 0.487550 -1.6710e-02 9 0.511790 0.4128646 0.09892543 0.82926421 0.51365341 insignificant 1.00000 1.000000 insignificant 0.9955686 0.04259836 weaklyHypometh 1 1.00000 insignificant -0.0467589 0.4359625 insignificant 1.00000 insignificant 0.485762 0.0277411 0.4522450 9 0.511790 0.1440761 0.36771394 8.7634e-31 1.0000000 hypermethylated 3.2457e-29 1.00000 hypermethylated 4.3781e-18 1.000000 hypermethylated 4.3781e-16 1 hypermethylated 0.40888433 1.0527e-09 hypermethylated 7.0178e-08 hypermethylated 0.485661 0.104920 0.38656944 9 0.4652637 0.183663 0.2816010 8.6900e-21 1.0000e+00 hypermethylated 1.7380e-18 1.0000e+00 hypermethylated 6.4282e-15 9.9990e-01 hypermethylated 2.1427e-12 1.0000e+00 hypermethylated 0.31102007 5.6248e-06 hypermethylated 0.0018749 hypermethylated 0.487550 0.0277411 4.6512e-01 9 0.412865 0.1440761 0.26878851 3.8153e-23 1.000000 hypermethylated 1.4131e-21 1 hypermethylated 1.8485e-15 0.999999 hypermethylated 1.8485e-13 1 hypermethylated 0.4556432 5.6299e-07 hypermethylated 3.7533e-05 hypermethylated 0.487550 0.1044701 0.40235863 9 0.4128646 0.1020290 0.31083565 2.1267e-17 9.9999e-01 hypermethylated 4.2533e-15 1.0000e+00 hypermethylated 6.6636e-13 9.9999e-01 hypermethylated 2.2212e-10 1.0000000 hypermethylated 0.3577790 1.8204e-05 hypermethylated 0.0091021 hypermethylated 0.0277411 0.1044701 -0.0675218 9 0.1440761 0.1020290 0.04204714 1.0000e+00 3.0836e-05 weaklyHypometh 1.0000e+00 5.9750e-04 weaklyHypometh 0.9999999 2.3366e-05 weaklyHypometh 1.00000 1.0159e-03 weaklyHypometh -0.0978643 3.4935e-02 weaklyHypometh 4.4789e-01 insignificant chr6 170884943 170885943 25461 ENSG00000217874 0.855238 67 3 0.8186327 194 5 0.7036157 117 5 0.8177273 61 4 0.7884615 35 3 0.878610 109 4 0.784188 46 3 0.8011983 62 3 0.682677 59 2 0.539394 38 2 0.8924485 47 3 0.681818 25 2 0.8755981 41 2 0.77778 31 2 0.875000 26 2 1.000000 7 0 0.791667 18 2 0.8168831 30 2 0.800000 43 3 0.8209091 51 2 0.9047619 10 1 0.8245098 38 2 0.709216 67 5 0.760684 31 2 0.7780905 73 3 0.9214498 171 5 0.9166667 29 2 0.529762 16 2 0.719697 29 3 0.9449495 194 5 0.8563790 199 5 0.880992 105 4 0.8598942 171 5 0.666667 23 2 0.8135348 141 5 0.8183761 26 2 0.955556 35 2 0.92354497 129 5 0.8583333 58 3 0.9095455 48 4 0.6473748 43 3 0.9375000 31 2 0.785880 29 2 0.8650794 0.789374 0.7275248 0.9238215 0.7155745 0.849178 0.766065 0.7640200 0.780575 0.760943 0.837557 0.556678 0.8794739 0.70919 0.913580 0.989581 0.7438272 0.8178612 0.725103 0.8825101 0.837743 0.7701525 0.590216 0.761000 0.7716628 0.8742284 0.9074074 0.729718 0.666947 0.9337199 0.8638713 0.864065 0.7554380 0.5823045 0.63208294 0.7327477 0.950617 0.9368345 0.8672840 0.8590348 0.5781818 0.8935185 0.850652 2 0.803975 0.853430 -3.2435e-02 3 0.808481 0.8549053 -0.04642425 0.77675033 0.02153328 lowCoverage 1.00000 0.797529 lowCoverage 0.6989858 0.15479211 lowCoverage 1 1.00000 lowCoverage -0.0121709 0.7687147 lowCoverage 1.00000 lowCoverage 0.803975 0.8323810 0.0154820 3 0.808481 0.8514488 -0.04296770 5.6229e-01 0.0775965 lowCoverage 1.0000e+00 1.00000 lowCoverage 8.4515e-01 0.213791 lowCoverage 1.0000e+00 1 lowCoverage -0.03950318 4.2400e-01 lowCoverage 1.0000e+00 lowCoverage 0.803975 0.817308 -0.01646331 2 0.8084811 0.829657 -0.0211762 5.2955e-01 1.7768e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.6885e-01 1.2249e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.02763446 6.4224e-01 lowCoverage 1.0000000 lowCoverage 0.853430 0.8323810 2.9420e-02 5 0.854905 0.8514488 0.00345655 3.2119e-01 0.129342 insignificant 1.0000e+00 1 insignificant 7.4427e-01 0.383285 insignificant 1.0000e+00 1 insignificant -0.0273322 6.2310e-01 lowCoverage 1.0000e+00 lowCoverage 0.853430 0.8173077 0.02187887 2 0.8549053 0.8296572 0.02524808 4.0394e-01 7.5574e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.6054e-01 1.8962e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage -0.0154635 8.1082e-01 lowCoverage 1.0000000 lowCoverage 0.8323810 0.8173077 -0.0257571 2 0.8514488 0.8296572 0.02179154 4.0925e-01 7.6792e-02 lowCoverage 1.0000e+00 6.2944e-01 lowCoverage 0.8805637 3.7490e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.0118687 8.6283e-01 lowCoverage 1.0000e+00 lowCoverage chr7 837435 838435 25468 UNC84A ENSG00000164828 0.710946 125 6 0.5277820 100 6 0.3833333 48 6 0.5231632 102 6 0.7292411 59 6 0.867860 179 6 0.507292 55 6 0.7110029 74 6 0.606250 48 6 0.715677 52 5 0.5164574 195 6 0.725926 38 6 0.6295960 88 6 0.78525 44 5 0.663131 49 6 0.453968 40 6 0.750000 7 0 0.7911034 132 5 0.719048 41 4 0.7104803 85 6 0.6658730 38 4 0.6000000 10 0 0.849507 57 5 0.560440 56 6 0.6552203 87 5 0.6883764 82 6 0.7910578 109 6 0.752381 32 4 0.666638 126 6 0.6778499 55 6 0.7193062 65 6 0.665278 61 6 0.6667781 97 6 0.608903 70 6 0.5182003 95 6 0.5833333 20 0 0.511359 87 6 0.63517601 87 6 0.7635772 87 5 0.8481179 96 5 0.6338014 97 5 0.8682796 70 2 0.725922 102 5 0.7110360 0.654963 0.4078788 0.7053140 0.6593777 0.841081 0.665152 0.7071297 0.639697 0.808943 0.721147 0.720404 0.7311295 0.80828 0.657466 0.528081 0.8318182 0.7927667 0.753247 0.6465141 0.707143 0.5788550 0.778059 0.657832 0.7065831 0.7258590 0.7868530 0.754091 0.731833 0.7626787 0.7234389 0.654091 0.6531336 0.6428007 0.63801318 0.5909091 0.523756 0.7010843 0.8121386 0.8203012 0.6910034 0.8642229 0.690339 0 0.709161 0.746787 -3.5874e-02 6 0.632792 0.6657752 -0.03298279 0.95638266 0.13993393 insignificant 1.00000 1.000000 insignificant 0.9278855 0.45492318 insignificant 1 1.00000 insignificant -0.0396185 0.2862543 insignificant 1.00000 insignificant 0.710968 0.6250000 0.0882755 6 0.652598 0.5534549 0.09914280 2.7895e-03 0.9924028 weaklyHypermeth 2.7348e-02 1.00000 weaklyHypermeth 3.3904e-02 0.983406 weaklyHypermeth 3.6068e-01 1 insignificant 0.06408387 1.1180e-01 insignificant 1.0000e+00 insignificant 0.710781 0.791574 -0.04521442 5 0.6475472 0.837030 -0.1894827 9.9487e-01 3.2651e-02 weaklyHypometh 1.0000e+00 8.5831e-01 insignificant 9.9917e-01 2.5480e-02 weaklyHypometh 1.0000e+00 8.9265e-01 insignificant -0.11656416 5.2344e-02 lowCoverage 1.0000000 lowCoverage 0.747748 0.6250000 1.2489e-01 6 0.739750 0.5534549 0.18629540 1.9565e-04 0.999849 weaklyHypermeth 2.4154e-03 1 weaklyHypermeth 3.4154e-02 0.999781 weaklyHypermeth 3.4851e-01 1 insignificant 0.1037023 1.0080e-02 weaklyHypermeth 1.7085e-01 insignificant 0.746442 0.7915743 -0.01455691 5 0.6508614 0.8370298 -0.18616848 9.0313e-01 5.6457e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9719e-01 3.4297e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0769457 1.5892e-01 lowCoverage 1.0000000 lowCoverage 0.6269316 0.7911111 -0.1265739 5 0.5809700 0.8166586 -0.23568853 1.0000e+00 2.9292e-03 weaklyHypometh 1.0000e+00 3.5291e-02 weaklyHypometh 0.9999978 2.1088e-03 weaklyHypometh 1.00000 3.8342e-02 weaklyHypometh -0.1806480 8.9644e-03 lowCoverage 1.6090e-01 lowCoverage chr7 837535 838535 25469 UNC84A ENSG00000164828 0.672183 83 5 0.4904939 77 5 0.4200000 43 5 0.4656256 75 5 0.7173469 43 5 0.848983 172 5 0.448810 43 5 0.6855906 65 5 0.578571 38 5 0.692100 45 4 0.4758024 178 5 0.715556 29 5 0.5934905 66 5 0.76230 34 4 0.635758 39 5 0.381481 31 5 0.800000 5 0 0.7717139 91 4 0.662857 38 4 0.6801094 72 5 0.7990476 37 4 0.5000000 8 0 0.853218 40 4 0.553846 51 5 0.5862644 57 4 0.6494235 71 5 0.7892693 104 5 0.711111 26 3 0.637812 88 5 0.6522367 48 5 0.7031674 60 5 0.631667 49 5 0.6295455 63 5 0.582857 47 5 0.4704754 85 5 0.5666667 17 0 0.423155 66 5 0.60686782 75 5 0.7383347 58 4 0.8177415 67 4 0.5753765 70 4 0.8483871 39 1 0.696115 81 4 0.6756238 0.623683 0.4458781 0.6649870 0.6313876 0.812032 0.619176 0.6739049 0.610394 0.800133 0.691679 0.709916 0.6902900 0.79152 0.631411 0.462127 0.8924731 0.7682607 0.708141 0.5959596 0.836406 0.5018715 0.769748 0.668404 0.6529477 0.6757472 0.7844498 0.709140 0.706866 0.7454111 0.7094439 0.621326 0.6166096 0.6251920 0.59012312 0.5770609 0.445405 0.6769098 0.7841017 0.7874530 0.6480606 0.8453000 0.651144 0 0.670087 0.716745 -4.2080e-02 5 0.605597 0.6414289 -0.03583187 0.94843096 0.12060661 insignificant 1.00000 1.000000 insignificant 0.9345592 0.39169581 insignificant 1 1.00000 insignificant -0.0473166 0.2793336 lowCoverage 1.00000 lowCoverage 0.671975 0.5609065 0.1025173 5 0.624478 0.5170542 0.10742430 2.5895e-03 0.9868580 weaklyHypermeth 2.5639e-02 1.00000 weaklyHypermeth 3.8269e-02 0.968972 weaklyHypermeth 3.9863e-01 1 insignificant 0.07834413 1.0440e-01 lowCoverage 1.0000e+00 lowCoverage 0.671713 0.719745 -0.03548072 4 0.6187967 0.822133 -0.2033364 9.8641e-01 6.6991e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.9687e-01 1.1790e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.11025237 9.1921e-02 lowCoverage 1.0000000 lowCoverage 0.717868 0.5609065 1.4390e-01 5 0.721608 0.5170542 0.20455334 1.6938e-04 0.999744 weaklyHypermeth 2.1441e-03 1 weaklyHypermeth 2.9343e-02 0.999746 weaklyHypermeth 3.0251e-01 1 insignificant 0.1256607 1.5387e-02 lowCoverage 2.2965e-01 lowCoverage 0.716088 0.7197452 -0.00012406 4 0.6216075 0.8221330 -0.20052550 8.3737e-01 7.3291e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.9239e-01 4.9546e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage -0.0629358 3.0413e-01 lowCoverage 1.0000000 lowCoverage 0.5628571 0.7188498 -0.1316561 4 0.5433000 0.7967235 -0.25342344 1.0000e+00 1.8431e-02 lowCoverage 1.0000e+00 1.7894e-01 lowCoverage 0.9999788 1.6643e-02 lowCoverage 1.00000 2.0297e-01 lowCoverage -0.1885965 1.3785e-02 lowCoverage 2.2234e-01 lowCoverage chr7 865035 866035 25470 UNC84A ENSG00000164828 0.537950 221 8 0.5433575 170 8 0.4861111 72 8 0.5294706 215 8 0.4900000 75 8 0.472674 348 8 0.433333 68 8 0.6640786 214 8 0.397467 133 8 0.621612 76 8 0.4286391 371 8 0.470899 41 5 0.5121773 157 9 0.45853 88 8 0.562963 81 8 0.550000 40 3 0.000000 2 0 0.5936405 263 9 0.585075 190 8 0.4932364 342 8 0.4981481 76 8 0.6320489 120 8 0.347953 109 8 0.517119 109 8 0.5244496 90 8 0.6024959 238 8 0.6162776 115 8 0.515000 33 3 0.623204 131 8 0.4732651 211 8 0.5251247 218 8 0.622640 373 8 0.4829476 171 9 0.500000 127 8 0.4919593 188 8 0.5208333 15 0 0.447500 157 8 0.50005478 264 8 0.6545348 183 8 0.6658591 161 8 0.5795008 264 8 0.6703843 136 8 0.454868 144 8 0.6100651 0.561703 0.4963814 0.5976142 0.6201970 0.540410 0.494636 0.6311469 0.450516 0.712331 0.541111 0.546616 0.5928121 0.46720 0.640443 0.546360 NA 0.5834200 0.548932 0.5581558 0.559068 0.6394770 0.441061 0.588045 0.4698658 0.5758492 0.5727669 0.651054 0.595655 0.5541707 0.5383632 0.583263 0.5216324 0.5021711 0.50012834 0.5446999 0.456078 0.5490732 0.5717292 0.5965912 0.6035251 0.6333098 0.515743 8 0.555731 0.556226 2.8080e-03 8 0.501576 0.5220280 -0.02045155 0.68499835 0.61482199 insignificant 1.00000 1.000000 insignificant 0.3864509 0.58048230 insignificant 1 1.00000 insignificant -0.0499163 0.2039713 insignificant 1.00000 insignificant 0.555731 0.5140998 0.0532315 8 0.501576 0.4648654 0.03671103 5.9116e-03 0.9687451 weaklyHypermeth 5.4737e-02 1.00000 weaklyHypermeth 1.1887e-01 0.807696 insignificant 1.0000e+00 1 insignificant 0.00101164 9.7473e-01 insignificant 1.0000e+00 insignificant 0.555731 0.581081 -0.02793868 8 0.5015764 0.606166 -0.1045892 9.3164e-01 8.8903e-03 weaklyHypometh 1.0000e+00 3.3421e-01 insignificant 9.1385e-01 1.3956e-02 weaklyHypometh 1.0000e+00 5.9648e-01 insignificant -0.11346842 5.2691e-02 insignificant 1.0000000 insignificant 0.556226 0.5140998 5.0737e-02 8 0.522028 0.4648654 0.05716257 9.9608e-03 0.973991 weaklyHypermeth 8.9737e-02 1 weaklyHypermeth 1.2827e-01 0.966577 insignificant 1.0000e+00 1 insignificant 0.0509279 7.0966e-02 insignificant 7.4701e-01 insignificant 0.556226 0.5810811 -0.03065030 8 0.5220280 0.6061656 -0.08413765 9.9202e-01 4.0615e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9668e-01 2.3814e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant -0.0635521 2.2359e-01 insignificant 1.0000000 insignificant 0.5140998 0.5810811 -0.0814857 8 0.4648654 0.6061656 -0.14130022 9.9906e-01 3.5228e-04 weaklyHypometh 1.0000e+00 5.0325e-03 weaklyHypometh 0.9996801 2.0735e-02 weaklyHypometh 1.00000 2.4394e-01 insignificant -0.1144801 4.7329e-02 weaklyHypometh 5.6344e-01 insignificant chr7 873335 874335 25471 UNC84A ENSG00000164828 0.942898 622 10 0.8483821 175 8 0.8241491 187 10 0.9451335 551 10 0.7451715 90 8 0.846025 466 7 0.731676 121 8 0.8595799 170 8 0.761435 136 8 0.991620 193 9 0.9111004 320 10 0.988636 58 4 0.7510798 213 8 0.96745 100 8 0.924335 218 6 0.957729 54 2 0.666667 29 3 0.8782846 724 10 0.953357 343 10 0.9057504 341 8 0.7731481 72 5 0.8100038 184 9 0.864524 232 10 0.895221 136 8 0.9243207 255 10 0.9204907 344 10 0.7719681 132 9 0.864857 80 7 0.871917 240 9 0.9854157 242 8 0.9515453 273 9 0.882279 375 10 0.2331530 314 10 0.252974 317 10 0.0000000 327 9 0.3339899 67 5 0.216857 213 10 0.44696338 261 7 0.9661992 413 10 0.9527747 550 10 0.9616838 492 10 0.9390039 499 10 0.920700 505 10 0.9447975 0.862631 0.8594423 0.9458242 0.8749056 0.921200 0.906669 0.9249636 0.928762 0.979700 0.938592 0.971936 0.9557766 0.96610 0.904002 0.930681 0.9690814 0.9362214 0.949782 0.9290633 0.906064 0.9161655 0.935525 0.902076 0.9102129 0.9344739 0.9189739 0.907262 0.946881 0.9839256 0.9639359 0.900958 0.3207109 0.1373453 0.17936169 0.5656566 0.277750 0.6321301 0.9550695 0.9605338 0.9756757 0.9531883 0.914091 5 0.922037 0.928237 -7.6406e-03 10 0.838417 0.8782932 -0.03987629 0.94833970 0.77882006 insignificant 1.00000 1.000000 insignificant 0.9759164 0.42617078 insignificant 1 1.00000 insignificant -0.0062845 0.8286250 insignificant 1.00000 insignificant 0.922322 0.2334890 0.6871447 10 0.852802 0.2224717 0.63032993 5.5066e-97 1.0000000 hypermethylated 1.8355e-94 1.00000 hypermethylated 1.5033e-21 1.000000 hypermethylated 1.8791e-19 1 hypermethylated 0.62270008 5.0266e-05 hypermethylated 1.7795e-03 hypermethylated 0.924365 0.948760 -0.02029103 10 0.8866444 0.950590 -0.0639455 9.8923e-01 1.3768e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7027e-01 3.1158e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.07804929 2.5407e-03 weaklyHypometh 0.1587925 insignificant 0.928179 0.2334890 6.7725e-01 10 0.851834 0.2224717 0.62936229 1.9571e-71 1.000000 hypermethylated 4.8929e-69 1 hypermethylated 1.4808e-19 1.000000 hypermethylated 2.9617e-17 1 hypermethylated 0.6289846 5.9159e-05 hypermethylated 2.1128e-03 hypermethylated 0.931485 0.9487597 -0.01523393 10 0.8890181 0.9505898 -0.06157171 9.4293e-01 5.0909e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 6.3520e-01 1.8642e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0717648 3.9364e-03 weaklyHypometh 0.2811708 insignificant 0.2341137 0.9487597 -0.7125826 10 0.2629211 0.9505898 -0.68766870 1.0000e+00 1.6673e-42 hypomethylated 1.0000e+00 3.3346e-40 hypomethylated 1.0000000 1.8630e-13 hypomethylated 1.00000 2.6615e-11 hypomethylated -0.7007494 6.9569e-05 hypomethylated 5.9932e-03 hypomethylated chr7 877935 878935 25472 UNC84A ENSG00000164828 0.961770 218 5 0.7461815 129 5 0.4914474 90 4 0.9038334 174 5 0.6500000 31 2 0.938312 238 5 0.770833 38 3 0.7972082 135 5 0.765630 63 4 0.764423 64 2 0.7355327 132 4 0.584286 40 3 0.7135284 140 5 NA 0 0 0.661828 66 4 0.250000 13 1 0.533333 18 2 0.8555763 196 4 0.893421 108 5 0.8602370 156 5 0.7885714 53 5 0.7368841 106 5 0.920000 101 5 0.693333 48 5 0.9388704 95 4 0.6975518 160 5 0.6851709 103 5 0.460000 24 1 0.830462 104 4 0.7440411 199 5 0.8373657 168 4 0.840739 178 5 0.6268597 142 4 0.545030 105 5 0.3369792 94 2 0.7938462 44 4 0.637804 64 5 0.72472068 181 5 0.8224387 137 5 0.9285295 192 4 0.8194185 152 5 0.9109592 127 4 0.915456 198 5 0.9107790 0.752688 0.4988328 0.8755659 0.7005376 0.919596 0.696461 0.8376270 0.793257 0.832041 0.761806 0.731567 0.6677702 NA 0.814562 0.520227 0.6487455 0.7891869 0.857878 0.8594516 0.812596 0.6226647 0.887634 0.874552 0.8995463 0.7536399 0.8084620 0.657527 0.806164 0.8327503 0.8178407 0.870535 0.5604118 0.6766157 0.38121380 0.8618693 0.788106 0.7845394 0.7592360 0.8773678 0.7664743 0.8517407 0.903003 1 0.837970 0.840926 -4.2241e-03 5 0.811254 0.7803199 0.03093388 0.34446960 0.71759334 insignificant 1.00000 1.000000 insignificant 0.4155474 0.38566676 insignificant 1 1.00000 insignificant -0.0340272 0.5385425 lowCoverage 1.00000 lowCoverage 0.837970 0.6380952 0.1591445 5 0.811254 0.6550896 0.15616417 7.8537e-04 0.9954537 weaklyHypermeth 8.6305e-03 1.00000 weaklyHypermeth 5.1948e-01 0.725584 insignificant 1.0000e+00 1 insignificant 0.11951533 1.5176e-01 lowCoverage 1.0000e+00 lowCoverage 0.837970 0.839950 -0.01248280 5 0.8112538 0.875131 -0.0638768 8.4165e-01 1.8242e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.4293e-01 8.8483e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.14897180 4.5215e-03 lowCoverage 0.2151090 lowCoverage 0.840926 0.6380952 1.5767e-01 5 0.780320 0.6550896 0.12523029 1.3372e-03 0.955268 weaklyHypermeth 1.4075e-02 1 weaklyHypermeth 2.1297e-01 0.680441 insignificant 1.0000e+00 1 insignificant 0.1535426 7.2632e-02 lowCoverage 7.5658e-01 lowCoverage 0.840926 0.8399504 -0.01441437 5 0.7803199 0.8751306 -0.09481071 6.6661e-01 3.8068e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 5.5868e-01 2.5970e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant -0.1149445 1.9881e-02 lowCoverage 0.8541057 lowCoverage 0.6380952 0.8399504 -0.1828794 5 0.6550896 0.8751306 -0.22004100 9.9835e-01 1.8969e-04 weaklyHypometh 1.0000e+00 3.0109e-03 weaklyHypometh 0.9316797 2.9911e-02 weaklyHypometh 1.00000 3.3234e-01 insignificant -0.2684871 7.4551e-03 lowCoverage 1.4337e-01 lowCoverage chr7 922435 923435 25474 ENSG00000105972 0.938672 380 24 0.8610674 486 27 0.8790371 898 28 0.9410394 479 22 0.9299741 1252 27 0.922547 400 26 0.887376 1113 27 0.8738825 300 27 0.902969 735 27 0.932733 696 27 0.8877252 862 28 0.926326 1296 28 0.8843651 699 27 0.91285 220 6 0.944867 880 28 0.911106 1468 28 0.938165 1346 28 0.8481188 562 27 0.918956 655 27 0.8994618 328 25 0.9219365 309 26 0.8341299 149 7 0.856031 489 28 0.858459 307 25 0.9098173 143 14 0.9115095 332 25 0.8213721 262 24 0.944256 336 27 0.893993 236 24 0.9263081 375 27 0.8738733 309 27 0.938909 495 25 0.4764677 542 28 0.423994 623 27 0.4228006 621 27 0.6215354 109 10 0.559006 442 27 0.44243252 348 26 0.8919613 367 24 0.8338597 391 25 0.8308934 223 18 0.9038654 391 18 0.779495 377 23 0.9376356 0.862470 0.8683597 0.9371045 0.9226469 0.924376 0.899569 0.8771966 0.895022 0.938197 0.894027 0.914851 0.9001432 NA 0.941066 0.896402 0.9307147 0.8578034 0.915079 0.8904161 0.917833 0.8066701 0.880190 0.873901 0.9008061 0.9001501 0.8403058 0.924425 0.895499 0.9110582 0.9008031 0.934647 0.4766113 0.4651107 0.43669285 0.6357849 0.558028 0.3808644 0.8985869 0.7944807 0.8425537 0.9024147 0.776198 15 0.912786 0.899438 1.3897e-02 27 0.914578 0.9058777 0.00870040 0.02959984 0.65089377 weaklyHypermeth 1.00000 1.000000 insignificant 0.7694537 0.02763843 inconclusive 1 1.00000 insignificant 0.0161790 0.2474019 insignificant 1.00000 insignificant 0.912786 0.4781960 0.4408110 27 0.914578 0.4609902 0.45358782 1.6237e-215 1.0000000 hypermethylated 1.6237e-212 1.00000 hypermethylated 1.9286e-45 1.000000 hypermethylated 1.9286e-42 1 hypermethylated 0.41602269 3.9692e-05 hypermethylated 1.5266e-03 hypermethylated 0.912786 0.838673 0.06955489 21 0.9145781 0.848621 0.0659571 8.4882e-16 9.1689e-01 weaklyHypermeth 8.4882e-14 1.0000e+00 weaklyHypermeth 2.2032e-04 6.3220e-01 weaklyHypermeth 1.3770e-02 1.0000e+00 weaklyHypermeth 0.05904699 5.7309e-02 insignificant 1.0000000 insignificant 0.898985 0.4785847 4.2865e-01 27 0.886135 0.4795768 0.40655797 9.8688e-112 1.000000 hypermethylated 9.8688e-109 1 hypermethylated 2.8659e-39 1.000000 hypermethylated 2.8659e-36 1 hypermethylated 0.3998437 2.0275e-05 hypermethylated 8.4479e-04 hypermethylated 0.898985 0.8387650 0.05587365 21 0.8861348 0.8538409 0.03229383 1.7561e-05 9.8983e-01 weaklyHypermeth 7.3172e-04 1.0000e+00 weaklyHypermeth 5.6428e-03 9.7744e-01 weaklyHypermeth 2.1703e-01 1.0000000 insignificant 0.0428680 1.4199e-01 insignificant 1.0000000 insignificant 0.4785847 0.8387650 -0.3465065 21 0.4795768 0.8538409 -0.37426414 1.0000e+00 1.1209e-49 hypomethylated 1.0000e+00 1.1209e-46 hypomethylated 1.0000000 4.1866e-20 hypomethylated 1.00000 4.1866e-17 hypomethylated -0.3569757 1.4931e-05 hypomethylated 2.9862e-03 hypomethylated chr7 929535 930535 25475 ENSG00000105972 0.923977 614 28 0.7697892 1005 31 0.8249876 1166 33 0.9331379 762 26 0.8042301 1111 33 0.822467 917 29 0.837512 1292 32 0.8668158 1052 35 0.783011 941 33 0.855144 1186 32 0.8392268 1191 33 0.853421 1136 31 0.8124942 1055 32 0.79027 320 15 0.877168 1043 33 0.791030 696 32 0.729277 564 25 0.8218645 842 30 0.860162 1463 31 0.8549228 754 31 0.7594573 442 28 0.8352425 405 17 0.869872 837 34 0.834264 309 23 0.8137434 341 21 0.8578202 1183 32 0.8196062 707 31 0.808535 511 29 0.872027 1326 32 0.8707987 1389 34 0.9160960 1163 30 0.909501 1044 33 0.5777985 1236 31 0.580410 1095 31 0.8226746 1004 26 0.6985660 182 17 0.598301 748 32 0.72606701 1088 30 0.8649880 768 28 0.9159324 725 27 0.8953293 620 27 0.8457860 669 26 0.900532 561 29 0.9088733 0.798823 0.8329758 0.9015236 0.8570949 0.898947 0.818017 0.8472054 0.829661 0.896420 0.876782 0.840738 0.8229874 0.87603 0.873395 0.775677 0.7508825 0.8445979 0.883998 0.8634457 0.871059 0.7832786 0.886921 0.876370 0.8832617 0.8680931 0.8444840 0.832581 0.864770 0.8623435 0.8867508 0.918466 0.5692470 0.5263891 0.73746767 0.5527441 0.586133 0.7413881 0.8806580 0.8837515 0.8714279 0.8283630 0.867782 16 0.874326 0.874288 -1.0775e-02 32 0.818602 0.7678442 0.05075757 0.99678777 0.02781750 weaklyHypometh 1.00000 0.897339 insignificant 0.9999866 0.00213590 weaklyHypometh 1 0.35598 insignificant -0.0147018 0.3930513 insignificant 1.00000 insignificant 0.874359 0.6091911 0.2535210 33 0.832762 0.6063096 0.22645225 3.8230e-74 1.0000000 hypermethylated 4.7787e-72 1.00000 hypermethylated 9.5663e-15 1.000000 hypermethylated 5.9789e-13 1 hypermethylated 0.16524241 8.1838e-03 weaklyHypermeth 1.5441e-01 insignificant 0.874673 0.874963 -0.01056048 27 0.8282237 0.864034 -0.0358099 9.9999e-01 1.5390e-05 weaklyHypometh 1.0000e+00 3.5569e-03 weaklyHypometh 1.0000e+00 4.1718e-06 weaklyHypometh 1.0000e+00 1.0430e-03 weaklyHypometh -0.05196838 1.0392e-02 weaklyHypometh 0.3398186 insignificant 0.874741 0.6091181 2.5973e-01 32 0.820197 0.5973621 0.22283513 4.6846e-48 1.000000 hypermethylated 5.2051e-46 1 hypermethylated 4.9298e-14 1.000000 hypermethylated 3.7922e-12 1 hypermethylated 0.1799442 5.3223e-03 weaklyHypermeth 1.0235e-01 insignificant 0.875246 0.8752244 0.00423058 27 0.8395613 0.8851076 -0.04554629 9.4983e-01 4.8470e-02 inconclusive 1.0000e+00 1.0000e+00 insignificant 9.9691e-01 9.1805e-02 insignificant 1.0000e+00 1.0000000 insignificant -0.0372666 6.2108e-02 insignificant 1.0000000 insignificant 0.6096147 0.8757485 -0.2360787 27 0.6320983 0.9072353 -0.27513692 1.0000e+00 1.1047e-26 hypomethylated 1.0000e+00 9.2057e-25 hypomethylated 1.0000000 3.0569e-13 hypomethylated 1.00000 3.8211e-11 hypomethylated -0.2172108 2.1865e-03 weaklyHypometh 5.8127e-02 weaklyHypometh chr7 929635 930635 25476 ENSG00000105972 0.938619 620 32 0.8482018 1152 35 0.8467263 1336 37 0.9467219 765 30 0.8784964 1316 37 0.844505 887 33 0.880233 1673 37 0.8890662 1178 39 0.854764 1042 37 0.918711 1333 36 0.9062829 1430 37 0.889335 1472 36 0.8612706 1121 36 0.82869 302 13 0.922757 1141 37 0.862850 971 36 0.827310 754 29 0.8623017 824 34 0.887095 1691 35 0.8920711 730 35 0.8630712 469 31 0.8884917 328 15 0.905459 868 38 0.843292 346 27 0.8565613 333 24 0.8925897 1248 36 0.8631120 744 34 0.887379 632 32 0.924003 1516 36 0.9048604 1578 38 0.9390609 1252 34 0.925515 1036 37 0.6454812 1403 35 0.620148 1240 35 0.8336996 1177 32 0.7763368 191 18 0.657887 804 34 0.81368079 1163 34 0.8908606 836 32 0.9358813 812 31 0.9239371 663 31 0.8937951 753 30 0.926688 601 33 0.9307954 0.842064 0.8601204 0.9255954 0.8887414 0.889093 0.849686 0.8759488 0.863891 0.927228 0.900964 0.883932 0.8837545 0.91244 0.912572 0.822870 0.8020075 0.8951094 0.914326 0.8984486 0.896128 0.8543835 0.922796 0.876052 0.8895963 0.8804189 0.8788284 0.877225 0.903883 0.9085371 0.9213030 0.925071 0.6536407 0.5861123 0.77326084 0.6335201 0.654023 0.7956830 0.9125599 0.9184321 0.9139157 0.8831414 0.907015 20 0.900474 0.905990 -9.3849e-03 36 0.882031 0.8530099 0.02902144 0.99578178 0.01160005 weaklyHypometh 1.00000 0.527275 insignificant 0.9999907 0.00084974 weaklyHypometh 1 0.16995 insignificant -0.0118157 0.3196732 insignificant 1.00000 insignificant 0.900469 0.6669455 0.2203505 37 0.882031 0.6784483 0.20358304 3.3291e-75 1.0000000 hypermethylated 4.7558e-73 1.00000 hypermethylated 8.1050e-16 1.000000 hypermethylated 5.7893e-14 1 hypermethylated 0.15476162 9.2160e-03 weaklyHypermeth 1.6756e-01 insignificant 0.900483 0.911596 -0.01799382 31 0.8664179 0.888300 -0.0218817 1.0000e+00 1.1980e-05 weaklyHypometh 1.0000e+00 3.5569e-03 weaklyHypometh 1.0000e+00 3.5357e-06 weaklyHypometh 1.0000e+00 1.0430e-03 weaklyHypometh -0.03493192 1.4648e-02 weaklyHypometh 0.3958830 insignificant 0.906078 0.6668897 2.2893e-01 36 0.871554 0.6714581 0.20009556 3.0346e-48 1.000000 hypermethylated 3.7933e-46 1 hypermethylated 1.1813e-14 1.000000 hypermethylated 1.0739e-12 1 hypermethylated 0.1665773 6.5836e-03 weaklyHypermeth 1.1550e-01 insignificant 0.906313 0.9118450 -0.00528125 31 0.8732909 0.9084882 -0.03519733 9.8731e-01 5.6980e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9919e-01 1.2697e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0231162 9.4514e-02 insignificant 1.0000000 insignificant 0.6672806 0.9123430 -0.2123730 31 0.6950482 0.9296159 -0.23456771 1.0000e+00 7.8604e-29 hypomethylated 1.0000e+00 1.1229e-26 hypomethylated 1.0000000 6.8041e-14 hypomethylated 1.00000 1.1340e-11 hypomethylated -0.1896935 3.6403e-03 weaklyHypometh 8.8788e-02 weaklyHypometh chr7 1050335 1051335 25478 MIR339 ENSG00000199023 0.011966 1346 40 0.0094478 1102 42 0.0166094 1522 45 0.0258778 1112 29 0.0064094 1052 42 0.031425 2005 45 0.012987 1646 42 0.0285873 949 44 0.013790 1763 45 0.011195 1810 41 0.0141888 1337 45 0.017140 1898 45 0.0087233 1427 44 0.01820 388 8 0.011864 1868 45 0.014897 1816 45 0.016003 1370 41 0.0117866 1347 27 0.013164 934 42 0.0030376 1310 42 0.0552914 374 38 0.0258732 871 31 0.028001 1049 41 0.031080 548 37 0.0069367 561 26 0.0094801 1604 45 0.0087182 605 34 0.019369 646 32 0.013103 1020 40 0.0067116 1689 45 0.0040293 1418 45 0.035085 1681 44 0.0064593 1026 39 0.014563 1037 44 0.0292408 1402 33 0.0047009 473 30 0.072081 516 35 0.00588520 1282 42 0.0066768 1603 44 0.0060502 1523 40 0.0075136 1296 40 0.0040592 1580 40 0.030985 1385 40 0.0147861 0.013829 0.0192645 0.0190503 0.0155176 0.030944 0.013930 0.0265960 0.017001 0.013423 0.015290 0.022082 0.0094622 NA 0.012927 0.019724 0.0080504 0.0129358 0.027814 0.0059170 0.039000 0.0056819 0.031930 0.016987 0.0075619 0.0116115 0.0089324 0.022192 0.014575 0.0092896 0.0091127 0.044314 0.0084517 0.0238976 0.01494806 0.0057399 0.058962 0.0068686 0.0079445 0.0076668 0.0065745 0.0041839 0.019808 25 0.015463 0.017902 -1.4477e-03 43 0.016212 0.0236972 -0.00748494 0.44304956 0.85670572 insignificant 1.00000 1.000000 insignificant 0.0352028 0.99994137 inconclusive 1 1.00000 insignificant -0.0054416 0.2657344 insignificant 1.00000 insignificant 0.015432 0.0172594 -0.0012708 42 0.013795 0.0161713 -0.00237652 9.9663e-02 0.5662714 insignificant 7.0683e-01 1.00000 insignificant 1.5837e-01 0.977476 insignificant 1.0000e+00 1 insignificant -0.00729003 5.2789e-01 insignificant 1.0000e+00 insignificant 0.015463 0.010424 0.00822251 40 0.0162123 0.013806 0.0024058 1.5397e-02 9.9961e-01 weaklyHypermeth 3.8493e-01 1.0000e+00 insignificant 4.5727e-02 9.9986e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.00380791 5.0226e-01 insignificant 1.0000000 insignificant 0.017743 0.0172594 -8.8301e-05 41 0.015335 0.0161713 -0.00083636 8.3121e-01 0.808918 insignificant 1.0000e+00 1 insignificant 9.9088e-01 0.832348 insignificant 1.0000e+00 1 insignificant -0.0018485 8.7753e-01 insignificant 1.0000e+00 insignificant 0.017902 0.0104237 0.00999847 39 0.0236972 0.0138065 0.00989072 5.0361e-01 9.9932e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6913e-01 9.8814e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0092495 1.9561e-01 insignificant 1.0000000 insignificant 0.0172594 0.0104251 0.0086201 38 0.0161713 0.0141133 0.00205798 9.1183e-01 9.9658e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.9755856 9.9936e-01 insignificant 1.00000 1.0000e+00 insignificant 0.0110979 3.7781e-01 insignificant 1.0000e+00 insignificant chr7 1216735 1217735 25483 ZFAND2A ENSG00000178381 0.831814 261 12 0.7377966 416 11 0.5119693 216 11 0.8704023 233 14 0.7277778 105 9 0.764969 455 14 0.724141 51 3 0.7027609 363 11 0.573259 125 10 0.774387 168 11 0.8453003 599 11 0.634127 43 4 0.8130129 421 11 0.61693 265 11 0.784459 177 11 0.585714 87 10 0.433333 15 1 0.5756364 346 11 0.921096 708 11 0.6877814 199 13 0.7682612 120 10 0.6549426 199 11 0.603588 90 8 0.632188 114 10 0.7080291 184 14 0.8001137 531 11 0.7632026 304 11 0.391070 46 3 0.693721 434 11 0.9022466 653 11 0.7832367 530 11 0.920605 279 11 0.0892470 421 10 0.058018 275 11 0.1851852 266 12 0.0129870 50 3 0.098152 563 12 0.07376098 756 11 0.5393593 100 11 0.5677646 242 11 0.8082424 170 10 0.5225628 103 6 0.719132 111 10 0.7356224 0.641271 0.4790249 0.8430295 0.7696451 0.779305 0.631776 0.8209662 0.732783 0.871302 0.870463 0.789005 0.8177645 0.84139 0.733097 0.737674 0.6017765 0.5655292 0.889356 0.8499823 0.923658 0.6106893 0.676619 0.688236 0.7386431 0.8604810 0.8061212 0.571632 0.822879 0.8506195 0.7518089 0.862493 0.0362985 0.0573306 0.09405685 0.0417973 0.037269 0.0077246 0.4191504 0.5692556 0.7287466 0.5530090 0.728305 4 0.789253 0.844182 -4.3038e-02 11 0.661701 0.6468264 0.01487428 0.99520930 0.21358797 insignificant 1.00000 1.000000 insignificant 0.9924338 0.51760585 insignificant 1 1.00000 insignificant -0.0126004 0.8035797 insignificant 1.00000 insignificant 0.789363 0.0450450 0.7414125 11 0.678722 0.1734098 0.50531196 4.6231e-100 1.0000000 hypermethylated 2.3116e-97 1.00000 hypermethylated 4.8319e-24 0.999994 hypermethylated 9.6638e-22 1 hypermethylated 0.61960820 3.9124e-13 hypermethylated 4.3471e-11 hypermethylated 0.790258 0.584022 0.20036122 11 0.7319365 0.612218 0.1197181 6.2536e-12 9.9763e-01 hypermethylated 5.2113e-10 1.0000e+00 hypermethylated 4.7737e-06 9.7734e-01 hypermethylated 4.7737e-04 1.0000e+00 hypermethylated 0.07442103 2.8136e-01 insignificant 1.0000000 insignificant 0.844579 0.0446352 7.9137e-01 11 0.671297 0.1274882 0.54380930 8.0362e-101 1.000000 hypermethylated 4.0181e-98 1 hypermethylated 2.0334e-22 1.000000 hypermethylated 5.0834e-20 1 hypermethylated 0.6322086 5.5009e-10 hypermethylated 5.5009e-08 hypermethylated 0.846487 0.5840220 0.23277982 11 0.7833347 0.6122184 0.17111630 8.3954e-18 9.9995e-01 hypermethylated 2.0989e-15 1.0000e+00 hypermethylated 6.5695e-07 9.9967e-01 hypermethylated 9.3850e-05 1.0000000 hypermethylated 0.0870215 2.4484e-01 insignificant 1.0000000 insignificant 0.0443392 0.5840220 -0.5444921 11 0.1196525 0.6122184 -0.49256597 1.0000e+00 7.1308e-44 hypomethylated 1.0000e+00 2.3769e-41 hypomethylated 1.0000000 2.6272e-17 hypomethylated 1.00000 1.0157e-14 hypomethylated -0.5451872 2.0117e-04 hypomethylated 1.1176e-02 hypomethylated chr7 1520135 1521135 25488 INTS1 ENSG00000164880 0.791992 109 5 0.9382353 146 5 0.8004967 83 3 0.9817495 161 5 1.0000000 34 3 0.965824 172 5 0.578704 33 3 0.9741837 129 3 0.906770 89 3 0.965554 111 5 0.6937004 108 5 0.761905 22 3 0.8730479 109 3 0.85417 125 3 0.814324 109 3 0.878788 25 2 0.564815 197 5 0.4983712 227 6 0.836694 110 5 0.7827305 114 3 1.0000000 39 5 0.9551127 94 3 0.787356 81 3 0.705882 49 3 0.8821011 58 5 0.9765310 187 5 0.7777778 78 4 0.692308 47 3 0.947996 170 5 0.9356619 174 5 0.9513575 143 5 0.960908 145 5 0.6858528 130 5 0.914726 81 5 0.7111111 205 5 0.5000000 19 3 0.832168 112 3 0.78237420 160 5 0.9666667 87 5 0.9455450 134 5 0.8460317 91 5 0.9763889 81 3 0.659470 107 3 0.9274548 0.901925 0.9051880 0.9551648 1.0000000 0.899362 0.939173 0.9272874 0.850433 0.914552 0.872807 0.756929 0.9163756 0.87865 0.892045 0.868409 0.6666667 0.9390002 0.868624 0.9398100 1.000000 0.9143305 0.890936 0.900678 0.9354134 0.9411594 0.8941606 0.880437 0.919376 0.9226255 0.9218466 0.906288 0.8094703 0.9185342 0.83049473 0.7773723 0.855163 0.8225684 0.9652763 0.9437338 0.9490789 0.9373885 0.906796 3 0.869665 0.914625 -3.2220e-02 5 0.678950 0.8091087 -0.13015888 0.99961277 0.01555895 weaklyHypometh 1.00000 0.648290 insignificant 0.9999262 0.24948017 insignificant 1 1.00000 insignificant -0.0579801 0.2128268 lowCoverage 1.00000 lowCoverage 0.869926 0.7977369 0.0768800 5 0.643425 0.7791257 -0.13570098 4.5543e-05 0.4442294 weaklyHypermeth 5.5540e-04 1.00000 weaklyHypermeth 4.0585e-02 0.912115 weaklyHypermeth 4.1414e-01 1 insignificant 0.08539721 2.3548e-01 lowCoverage 1.0000e+00 lowCoverage 0.868701 0.932000 -0.05578174 5 0.6393486 0.784278 -0.1449291 9.9988e-01 6.2876e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9999e-01 8.3128e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.05571783 4.4007e-01 lowCoverage 1.0000000 lowCoverage 0.915873 0.7977369 1.0603e-01 5 0.913663 0.7791257 0.13453734 7.3709e-03 0.999987 weaklyHypermeth 6.8887e-02 1 weaklyHypermeth 4.1159e-02 0.999995 weaklyHypermeth 4.0751e-01 1 insignificant 0.1433773 6.2660e-02 lowCoverage 6.7376e-01 lowCoverage 0.915132 0.9364754 -0.02296916 5 0.8295788 0.9435553 -0.11397643 9.6278e-01 4.3509e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.0380e-01 7.6917e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0022622 9.7428e-01 lowCoverage 1.0000000 lowCoverage 0.7977208 0.9354167 -0.1334872 5 0.7582515 0.9096884 -0.15143697 9.9559e-01 4.0129e-03 weaklyHypometh 1.0000e+00 4.5601e-02 weaklyHypometh 0.9988469 1.8518e-02 weaklyHypometh 1.00000 2.2311e-01 insignificant -0.1411150 1.2533e-01 lowCoverage 1.0000e+00 lowCoverage chr7 1539135 1540135 25490 MAFK ENSG00000198517 0.724057 293 11 0.6682487 316 12 0.5960304 341 12 0.8643775 249 10 0.7055043 212 10 0.821097 441 12 0.803705 289 8 0.6984677 328 11 0.724174 361 12 0.796813 388 12 0.7370824 454 12 0.673451 195 8 0.5287444 544 12 0.74350 178 8 0.627145 307 12 0.656731 130 10 0.570850 127 6 0.4990453 416 11 0.649498 350 10 0.6931224 361 12 0.8639570 176 10 0.6936215 131 6 0.690498 201 8 0.674543 150 10 0.7664110 203 8 0.6938623 462 12 0.4984949 200 12 0.502744 120 11 0.752024 344 11 0.7304258 513 12 0.8270637 420 12 0.754967 412 12 0.4327408 424 12 0.239743 372 10 0.3641695 671 7 0.3480769 115 8 0.371053 248 12 0.34642259 559 12 0.8545862 193 9 0.8424413 263 10 0.8739891 184 6 0.7116934 268 9 0.815263 209 10 0.7821970 0.690822 0.6341602 0.8652657 0.7293438 0.817896 0.784184 0.7098846 0.727456 0.808393 0.814715 0.649277 0.5884116 0.79367 0.678637 0.715247 0.6571701 0.6185208 0.743096 0.8053279 0.847408 0.7430646 0.714261 0.661783 0.7623608 0.7629524 0.6349486 0.567030 0.778389 0.7583069 0.8110565 0.824734 0.4378256 0.2896990 0.42618438 0.4395317 0.358723 0.4023046 0.7960559 0.8322470 0.8271172 0.7432582 0.836435 5 0.749682 0.757430 -2.3702e-02 12 0.683914 0.5855276 0.09838619 0.92097641 0.16052914 insignificant 1.00000 1.000000 insignificant 0.8811801 0.37646532 insignificant 1 1.00000 insignificant -0.0149687 0.7003294 insignificant 1.00000 insignificant 0.749801 0.3235663 0.3563220 12 0.687610 0.3885087 0.29910090 3.9795e-49 0.9999917 hypermethylated 3.3162e-47 1.00000 hypermethylated 1.0844e-16 0.999800 hypermethylated 9.2881e-15 1 hypermethylated 0.33871465 1.7938e-07 hypermethylated 1.0552e-05 hypermethylated 0.749761 0.830797 -0.06121623 9 0.6862134 0.840737 -0.1545237 9.9999e-01 1.8104e-05 weaklyHypometh 1.0000e+00 3.5569e-03 weaklyHypometh 1.0000e+00 6.2158e-05 weaklyHypometh 1.0000e+00 1.2302e-02 weaklyHypometh -0.13051225 5.1657e-03 weaklyHypometh 0.2217404 insignificant 0.758113 0.3235663 3.9073e-01 12 0.710998 0.3885087 0.32248910 4.8566e-41 0.999994 hypermethylated 3.7359e-39 1 hypermethylated 6.6478e-16 0.999905 hypermethylated 7.3865e-14 1 hypermethylated 0.3536834 2.4814e-07 hypermethylated 1.7724e-05 hypermethylated 0.757885 0.8307968 -0.04582336 9 0.6635980 0.8407372 -0.17713918 9.9995e-01 4.5301e-03 weaklyHypometh 1.0000e+00 4.5301e-01 insignificant 1.0000e+00 2.8665e-03 weaklyHypometh 1.0000e+00 0.4777511 insignificant -0.1155435 1.8413e-02 weaklyHypometh 0.8541057 insignificant 0.3235663 0.8306452 -0.4206321 9 0.3885087 0.8293612 -0.44085251 1.0000e+00 1.0130e-27 hypomethylated 1.0000e+00 1.0130e-25 hypomethylated 1.0000000 3.0721e-10 hypomethylated 1.00000 2.7929e-08 hypomethylated -0.4692269 1.0185e-06 hypomethylated 3.3951e-04 hypomethylated chr7 1543435 1544435 25491 MAFK ENSG00000198517 0.516178 724 22 0.3890519 604 23 0.2810718 698 23 0.4976702 608 21 0.3895742 433 23 0.581887 1038 22 0.383068 527 21 0.3742485 695 23 0.351499 694 23 0.471931 596 23 0.4961939 873 23 0.332122 451 26 0.1828218 909 24 0.55226 352 15 0.301930 701 23 0.327311 452 19 0.204014 325 20 0.2702514 815 21 0.364505 645 23 0.4293245 731 22 0.4670968 296 20 0.2367365 549 20 0.436388 521 23 0.355507 316 23 0.4594617 428 21 0.3481495 810 23 0.3292616 602 25 0.255132 384 21 0.439174 703 23 0.2788550 974 23 0.2917727 842 23 0.555277 890 23 0.0836282 788 23 0.042929 545 23 0.0133333 577 18 0.1111111 216 15 0.052795 686 20 0.13258392 886 25 0.2125545 974 21 0.1641130 955 22 0.3377714 622 21 0.1887097 969 21 0.324246 753 21 0.5357646 0.452769 0.3756892 0.5180179 0.4858496 0.613069 0.475955 0.4826301 0.447955 0.560147 0.607917 0.444086 0.2478524 0.48085 0.427981 0.510007 0.2813028 0.2750659 0.434528 0.4911604 0.510428 0.1750498 0.514551 0.470382 0.4759735 0.3883245 0.3873812 0.341758 0.513759 0.3681669 0.3399774 0.576166 0.0053543 0.0020068 0.00019606 0.0604132 0.031013 0.0790628 0.2600050 0.2043256 0.3474715 0.2454204 0.324388 20 0.444988 0.394449 3.9263e-02 23 0.352377 0.3520990 0.00027757 0.07814813 0.97347093 insignificant 1.00000 1.000000 insignificant 0.3357628 0.79431908 insignificant 1 1.00000 insignificant 0.0137782 0.7186944 insignificant 1.00000 insignificant 0.445084 0.0365062 0.4213495 23 0.358399 0.0955794 0.26281931 1.6027e-79 0.9997023 hypermethylated 2.6711e-77 1.00000 hypermethylated 3.4020e-37 1.000000 hypermethylated 1.7010e-34 1 hypermethylated 0.31211558 1.2490e-09 hypermethylated 7.8060e-08 hypermethylated 0.445153 0.230103 0.21230122 21 0.3807986 0.249526 0.1312723 1.2058e-21 9.6902e-01 hypermethylated 3.0145e-19 1.0000e+00 hypermethylated 1.5730e-12 1.0000e+00 hypermethylated 2.6217e-10 1.0000e+00 hypermethylated 0.13936690 1.1923e-02 weaklyHypermeth 0.3618851 insignificant 0.394470 0.0365260 3.7688e-01 23 0.348754 0.0984758 0.25027871 6.5552e-57 1.000000 hypermethylated 9.3645e-55 1 hypermethylated 3.0699e-31 1.000000 hypermethylated 1.5349e-28 1 hypermethylated 0.2983374 1.6766e-07 hypermethylated 1.2897e-05 hypermethylated 0.394470 0.2300491 0.16898540 21 0.3487545 0.2419649 0.10678954 7.2258e-11 1.0000e+00 weaklyHypermeth 9.0323e-09 1.0000e+00 weaklyHypermeth 1.1666e-06 1.0000e+00 weaklyHypermeth 1.2963e-04 1.0000000 weaklyHypermeth 0.1255887 2.2143e-02 weaklyHypermeth 0.8541057 insignificant 0.0365457 0.2301030 -0.2118724 21 0.1015531 0.2495263 -0.14797320 1.0000e+00 1.6455e-28 hypomethylated 1.0000e+00 1.9102e-26 hypomethylated 1.0000000 3.0470e-17 hypomethylated 1.00000 1.0157e-14 hypomethylated -0.1727487 5.0612e-03 weaklyHypometh 1.0544e-01 insignificant chr7 1586335 1587335 25493 PSMG3 ENSG00000157778 0.883489 160 7 0.8543707 128 6 0.7090097 110 7 0.9375684 91 6 0.8264696 81 3 0.784518 156 7 0.895170 103 6 0.7809021 100 5 0.776501 118 7 0.871292 70 5 0.8740717 144 7 0.850542 116 7 0.7140787 115 7 NA 0 0 0.883550 93 7 0.752687 81 6 0.858835 93 7 0.8102968 77 4 0.896181 115 7 0.8030711 133 7 0.9033189 82 7 0.8456976 63 4 0.811760 102 7 0.837131 77 7 0.7333333 34 4 0.8766721 125 7 0.8290239 95 7 0.923377 56 6 0.830927 99 7 0.9417277 121 7 0.9073243 104 7 0.835985 177 7 0.7971432 119 7 0.818948 105 6 0.6588235 124 5 0.7648810 31 3 0.844850 107 7 0.67833365 105 7 0.8827891 110 6 0.8770555 141 7 0.8403361 71 6 0.8524852 127 6 0.867609 113 6 0.8720595 0.845900 0.6746881 0.9080491 0.7893078 0.739528 0.874297 0.7819210 0.763095 0.835871 0.813512 0.880421 0.6596727 NA 0.888612 0.735906 0.8152377 0.7520249 0.824218 0.7570407 0.859629 0.7586774 0.759638 0.780436 0.9219047 0.8484667 0.7139396 0.894780 0.839623 0.9187386 0.8632842 0.865844 0.7482465 0.7854253 0.85327956 0.7612280 0.809565 0.5908858 0.8105069 0.8350159 0.8274088 0.8090434 0.835461 2 0.826775 0.852863 -3.0535e-02 7 0.825873 0.8638312 -0.03795842 0.99449562 0.06308084 insignificant 1.00000 1.000000 insignificant 0.9970805 0.07360876 insignificant 1 1.00000 insignificant -0.0267457 0.2390096 insignificant 1.00000 insignificant 0.826775 0.7461929 0.0694312 7 0.825873 0.7535646 0.07230814 1.0848e-02 0.1724772 weaklyHypermeth 9.7730e-02 1.00000 weaklyHypermeth 1.2075e-01 0.040782 inconclusive 1.0000e+00 1 insignificant 0.06911413 8.2234e-02 insignificant 8.7437e-01 insignificant 0.826775 0.862989 -0.03852089 6 0.8258728 0.863429 -0.0375566 9.1966e-01 1.3806e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.2922e-01 2.0455e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03444435 5.0814e-02 insignificant 1.0000000 insignificant 0.852863 0.7461929 9.1443e-02 7 0.863831 0.7535646 0.11026656 4.1389e-04 0.455382 weaklyHypermeth 4.8693e-03 1 weaklyHypermeth 5.5060e-03 0.504720 weaklyHypermeth 7.0423e-02 1 weaklyHypermeth 0.0958599 2.6342e-02 weaklyHypermeth 3.4210e-01 insignificant 0.852863 0.8629893 -0.00289318 6 0.8638312 0.8634293 0.00040184 5.9749e-01 5.9879e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.7555e-01 8.7927e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0076986 6.8124e-01 insignificant 1.0000000 insignificant 0.7461929 0.8629893 -0.1054313 6 0.7535646 0.8634293 -0.10986472 4.2618e-01 6.1565e-02 insignificant 1.0000e+00 5.3074e-01 insignificant 0.2147676 1.3781e-01 insignificant 1.00000 1.0000e+00 insignificant -0.1035585 1.9591e-02 weaklyHypometh 2.8810e-01 insignificant chr7 1592435 1593435 25494 PSMG3 ENSG00000157778 0.887795 1038 28 0.8186149 608 28 0.7949819 791 29 0.9029231 998 27 0.8510441 397 27 0.907853 1333 29 0.895338 740 28 0.8593967 513 26 0.848181 665 29 0.903093 569 29 0.8503752 918 29 0.887345 385 27 0.9173485 698 29 0.90909 106 9 0.903413 605 28 0.927301 276 21 0.860765 286 25 0.8191662 1217 27 0.909107 689 29 0.8267772 969 25 0.8899748 362 26 0.7692103 528 21 0.871125 757 26 0.868439 458 27 0.9398202 436 21 0.9205094 728 29 0.8781915 518 27 0.864791 388 26 0.859135 477 25 0.8996535 724 28 0.8546368 596 29 0.908555 1166 27 0.5738781 709 28 0.232958 716 27 0.7177400 780 22 0.6525484 383 25 0.402956 430 26 0.65702711 811 29 0.6598136 1129 25 0.6049440 1287 29 0.6993307 1005 27 0.8262228 1232 24 0.718204 1171 27 0.8782155 0.820717 0.7763901 0.9018027 0.8778958 0.898377 0.885849 0.8732902 0.856418 0.904964 0.864242 0.905838 0.9035993 0.92957 0.894071 0.897036 0.8741413 0.8554201 0.897962 0.8467491 0.919505 0.7537060 0.891764 0.895327 0.9405092 0.9188277 0.9014020 0.938479 0.869859 0.9167458 0.9216089 0.891463 0.5802990 0.2037446 0.74392315 0.6540339 0.453667 0.5537517 0.6092677 0.5495025 0.6728029 0.8489417 0.714442 24 0.876431 0.896049 -1.8249e-02 29 0.847475 0.8620946 -0.01461914 0.93237863 0.02468119 weaklyHypometh 1.00000 0.878868 insignificant 0.9872963 0.01346553 weaklyHypometh 1 1.00000 insignificant -0.0030080 0.8439264 insignificant 1.00000 insignificant 0.876404 0.5267694 0.3555086 29 0.842555 0.5124930 0.33006227 3.3741e-94 1.0000000 hypermethylated 8.4353e-92 1.00000 hypermethylated 8.7630e-36 1.000000 hypermethylated 2.9210e-33 1 hypermethylated 0.33447754 6.6945e-03 weaklyHypermeth 1.3126e-01 insignificant 0.876523 0.666552 0.19710007 27 0.8595294 0.673504 0.1860251 2.2998e-60 1.0000e+00 weaklyHypermeth 2.2998e-57 1.0000e+00 weaklyHypermeth 3.2489e-24 1.0000e+00 weaklyHypermeth 3.2489e-21 1.0000e+00 weaklyHypermeth 0.17229254 7.9326e-03 weaklyHypermeth 0.2750312 insignificant 0.896035 0.5267694 3.7643e-01 29 0.857646 0.5124930 0.34515299 4.2339e-61 1.000000 hypermethylated 7.0565e-59 1 hypermethylated 6.5681e-30 1.000000 hypermethylated 2.1894e-27 1 hypermethylated 0.3374855 6.2325e-03 weaklyHypermeth 1.1233e-01 insignificant 0.896257 0.6665522 0.23128702 27 0.8695676 0.6735043 0.19606326 4.2077e-42 1.0000e+00 hypermethylated 4.2077e-39 1.0000e+00 hypermethylated 4.2166e-22 1.0000e+00 hypermethylated 4.2166e-19 1.0000000 hypermethylated 0.1753005 6.4178e-03 weaklyHypermeth 0.4011155 insignificant 0.5267834 0.6665522 -0.1498936 27 0.5129095 0.6735043 -0.16059483 9.9999e-01 9.6711e-08 weaklyHypometh 1.0000e+00 3.0222e-06 weaklyHypometh 0.9999724 1.2857e-04 weaklyHypometh 1.00000 3.8960e-03 weaklyHypometh -0.1621850 9.4587e-02 insignificant 9.7735e-01 insignificant chr7 1754635 1755635 25496 ENSG00000205971 0.705258 163 5 0.7355538 111 8 0.7941920 127 8 0.7544185 151 5 0.6942601 95 7 0.818204 196 8 0.855810 154 8 0.9078125 85 4 0.785552 175 5 0.883771 137 5 0.9107790 166 8 0.726638 110 5 0.5566667 119 5 0.56536 35 3 0.784470 117 5 0.806179 58 4 0.707899 77 5 0.7821768 208 4 0.832589 60 3 0.7641457 137 5 0.8801326 108 5 0.3778071 112 4 0.681653 151 5 0.840774 93 3 0.7195657 84 4 0.7357490 131 7 0.7925995 105 5 0.868667 102 5 0.743403 101 5 0.6663462 120 3 0.8262899 141 5 0.824896 168 7 0.3345714 123 5 0.245385 87 5 0.1547619 41 3 0.1973727 71 4 0.440304 74 5 0.45570541 141 6 0.7684497 199 6 0.7766782 183 6 0.7939338 150 4 0.6129776 165 4 0.634513 217 6 0.6523656 0.552803 0.5765781 0.5535666 0.4915028 0.530093 0.730430 0.6531804 0.516243 0.680139 0.722756 0.634474 0.3945250 0.51744 0.428749 0.716857 0.4979513 0.4289266 0.616000 0.5333712 0.689401 0.2914256 0.711028 0.552565 0.6069102 0.5007100 0.5419775 0.784199 0.512437 0.3546080 0.4465671 0.736887 0.2141477 0.1720550 0.16993624 0.1053957 0.246191 0.2856885 0.4163655 0.3949549 0.4746479 0.3602184 0.310369 3 0.611850 0.595760 4.2441e-03 5 0.755055 0.7777695 -0.02271484 0.61057621 0.45397973 insignificant 1.00000 1.000000 insignificant 0.8459190 0.52708323 insignificant 1 1.00000 insignificant 0.0220965 0.6271029 lowCoverage 1.00000 lowCoverage 0.611850 0.2383613 0.3643897 5 0.755055 0.4161385 0.33891625 8.3793e-33 0.9999751 hypermethylated 3.3517e-31 1.00000 hypermethylated 5.2629e-12 0.999999 hypermethylated 2.5061e-10 1 hypermethylated 0.46390330 8.2949e-05 lowCoverage 2.6758e-03 lowCoverage 0.596203 0.332604 0.16130050 5 0.7124781 0.771741 -0.0592625 3.9291e-02 1.4131e-01 weaklyHypermeth 9.3551e-01 1.0000e+00 insignificant 9.0199e-03 3.2395e-01 weaklyHypermeth 3.2214e-01 1.0000e+00 insignificant 0.05127631 2.8437e-01 insignificant 1.0000000 insignificant 0.595760 0.2383613 3.6407e-01 5 0.777770 0.4161385 0.36163109 7.7027e-16 0.999999 hypermethylated 2.1396e-14 1 hypermethylated 1.7313e-09 1.000000 hypermethylated 7.8698e-08 1 hypermethylated 0.4418068 3.0954e-05 lowCoverage 1.1905e-03 lowCoverage 0.578635 0.3326039 0.15464703 5 0.7416550 0.7717406 -0.03008563 1.5913e-01 4.3675e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.4588e-01 7.7579e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0291798 6.0582e-01 lowCoverage 1.0000000 lowCoverage 0.2358491 0.3326039 -0.2163669 5 0.4160211 0.7717406 -0.35571952 9.9999e-01 1.0707e-08 hypomethylated 1.0000e+00 3.5689e-07 hypomethylated 0.9999999 1.0540e-04 hypomethylated 1.00000 3.4000e-03 hypomethylated -0.4126270 1.4032e-04 lowCoverage 9.1265e-03 lowCoverage chr7 1868335 1869335 25497 ENSG00000215135 0.926601 160 6 0.7985096 205 8 0.8232731 192 8 0.9370040 192 6 0.8965909 74 6 0.958846 249 6 0.763285 49 2 0.8393298 122 6 0.854026 75 6 0.897475 31 2 0.9079867 211 6 0.966667 16 2 0.9658120 77 6 0.87089 42 5 0.881944 45 4 1.000000 8 1 NA 0 0 0.6448919 174 6 0.876464 181 4 0.9506211 162 6 0.8941582 97 6 0.3333333 3 0 0.867963 132 8 0.928571 29 3 0.9104827 111 4 0.9576096 227 8 0.8935198 144 6 1.000000 15 2 0.887570 152 4 0.9589699 243 8 0.9229009 244 8 0.864352 209 8 0.5166972 219 8 0.518631 213 6 0.8066876 233 8 0.2272727 72 2 0.496620 83 4 0.39552560 414 8 0.7797078 97 4 0.8128883 172 6 0.8093315 107 4 0.8913043 59 3 0.894502 128 4 0.9097534 0.870359 0.8386332 0.9584416 0.8990496 0.912254 0.815020 0.8520202 0.886312 0.963196 0.865852 0.941818 0.9927739 0.90770 0.925000 0.962264 NA 0.8928351 0.917923 0.9353473 0.806044 0.7576691 0.878008 0.953247 0.8988564 0.9452080 0.8935076 0.956115 0.897258 0.9446588 0.9286700 0.910588 0.4182222 0.4421980 1.00000000 0.3406262 0.637785 0.3706042 0.8021251 0.8320849 0.8674734 0.9442899 0.869160 0 0.896110 0.912150 -1.5689e-02 6 0.890096 0.9334545 -0.04335871 0.95434016 0.28817900 insignificant 1.00000 1.000000 insignificant 0.7558916 0.74238949 insignificant 1 1.00000 insignificant 0.0138306 0.8000764 lowCoverage 1.00000 lowCoverage 0.895668 0.4878444 0.3997531 6 0.839481 0.4496562 0.38982485 1.1968e-22 0.9999997 hypermethylated 3.5201e-21 1.00000 hypermethylated 1.9604e-05 1.000000 hypermethylated 3.7701e-04 1 hypermethylated 0.38854416 3.3157e-03 lowCoverage 7.3682e-02 lowCoverage 0.896323 0.766904 0.12289265 4 0.9042864 0.822637 0.0816494 4.5046e-07 3.3111e-01 lowCoverage 2.5026e-05 1.0000e+00 lowCoverage 2.5443e-02 6.9993e-01 lowCoverage 7.2694e-01 1.0000e+00 lowCoverage 0.04456982 1.7140e-01 lowCoverage 1.0000000 lowCoverage 0.911985 0.4886179 4.2238e-01 8 0.926061 0.5125427 0.41351783 2.5067e-17 1.000000 hypermethylated 7.1620e-16 1 hypermethylated 7.4375e-05 1.000000 hypermethylated 1.4019e-03 1 hypermethylated 0.3747135 2.6254e-03 weaklyHypermeth 5.8343e-02 weaklyHypermeth 0.911875 0.7673179 0.14245020 4 0.9260605 0.8423440 0.08371652 2.9568e-07 7.5900e-01 lowCoverage 1.8480e-05 1.0000e+00 lowCoverage 1.3951e-01 6.0093e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 0.0307392 5.8589e-01 lowCoverage 1.0000000 lowCoverage 0.4885808 0.7669039 -0.2668591 4 0.5141106 0.8226370 -0.30852648 9.9999e-01 3.0415e-07 lowCoverage 1.0000e+00 8.9454e-06 lowCoverage 0.9999661 1.9471e-03 lowCoverage 1.00000 3.6738e-02 lowCoverage -0.3439743 5.5826e-03 lowCoverage 1.1165e-01 lowCoverage chr7 1889035 1890035 25499 ENSG00000215135 0.926278 277 5 0.7997773 295 5 0.7871869 227 5 0.7929308 294 5 0.6181257 125 5 0.900407 325 5 0.824705 254 5 0.7328970 191 5 0.777564 180 5 0.814716 118 5 0.8489656 243 5 0.748136 115 5 0.6557279 179 5 0.63235 47 2 0.610697 192 5 0.757576 107 5 0.589457 86 3 0.7931584 310 5 0.752040 292 5 0.7203228 249 5 0.8069444 105 5 0.6178022 128 5 0.889487 166 5 0.815476 131 5 0.8512255 83 5 0.7743176 350 5 0.7755031 118 5 0.780495 86 5 0.845509 361 5 0.7592370 392 5 0.6463842 343 5 0.919733 316 5 0.6133939 244 5 0.595974 155 5 0.1600000 210 2 0.5866667 47 3 0.775903 194 5 0.55362532 361 5 0.7570746 329 5 0.7785916 335 5 0.5877459 262 5 0.6683323 370 5 0.758318 250 5 0.9096583 0.790811 0.7774160 0.7833931 0.7342560 0.893200 0.820875 0.7224086 0.769334 0.810187 0.846339 0.737945 0.5717702 0.82125 0.723979 0.750384 0.6953219 0.7421791 0.690134 0.7117394 0.965028 0.7288088 0.882446 0.768429 0.8137136 0.7658549 0.7181617 0.775985 0.839970 0.7487968 0.6349493 0.914445 0.5934637 0.5749885 0.56883528 0.5711974 0.705600 0.5355501 0.7461670 0.7671482 0.6999636 0.5876182 0.707265 5 0.784462 0.785576 -1.4733e-02 5 0.729966 0.7780961 -0.04813051 0.91590577 0.32349000 insignificant 1.00000 1.000000 insignificant 0.9612392 0.27060992 insignificant 1 1.00000 insignificant -0.0360251 0.2869287 lowCoverage 1.00000 lowCoverage 0.784462 0.5185797 0.1783486 5 0.729966 0.6704100 0.05955560 2.4160e-08 0.6785512 weaklyHypermeth 4.0948e-07 1.00000 weaklyHypermeth 3.6748e-03 0.437414 weaklyHypermeth 5.2498e-02 1 weaklyHypermeth 0.20655725 5.6555e-02 lowCoverage 6.6535e-01 lowCoverage 0.784462 0.771669 0.06078785 5 0.7299656 0.705290 0.0246756 5.4438e-03 9.8857e-01 weaklyHypermeth 1.5554e-01 1.0000e+00 insignificant 7.8718e-03 9.9315e-01 weaklyHypermeth 3.0276e-01 1.0000e+00 insignificant 0.04413854 3.2485e-01 lowCoverage 1.0000000 lowCoverage 0.785576 0.5185797 2.0439e-01 5 0.778096 0.6704100 0.10768611 3.8658e-07 0.678732 hypermethylated 6.3374e-06 1 hypermethylated 2.6020e-03 0.550875 weaklyHypermeth 3.7172e-02 1 weaklyHypermeth 0.2425824 3.2731e-02 lowCoverage 4.0914e-01 lowCoverage 0.785576 0.7716688 0.07512699 5 0.7780961 0.7052900 0.07280612 2.3202e-03 9.9888e-01 weaklyHypermeth 7.2507e-02 1.0000e+00 weaklyHypermeth 3.4537e-03 9.9931e-01 weaklyHypermeth 1.4390e-01 1.0000000 insignificant 0.0801637 1.0577e-01 insignificant 1.0000000 insignificant 0.5185797 0.7716688 -0.1056878 5 0.6704100 0.7052900 -0.03487999 9.7287e-02 3.9747e-03 weaklyHypometh 1.0000e+00 4.5601e-02 weaklyHypometh 0.2103803 1.5211e-01 insignificant 1.00000 1.0000e+00 insignificant -0.1624187 1.1982e-01 lowCoverage 1.0000e+00 lowCoverage chr7 1889135 1890135 25500 ENSG00000215135 0.888257 339 7 0.7714816 372 7 0.7687128 281 7 0.8036241 406 7 0.6771359 159 7 0.883285 400 7 0.825547 300 7 0.7879633 233 7 0.796502 231 7 0.845676 144 7 0.8319679 281 7 0.756802 159 7 0.5988793 228 7 0.63235 47 2 0.671118 233 7 0.798268 117 7 0.624855 132 5 0.7623688 410 7 0.767327 319 7 0.7294777 326 7 0.7796875 139 7 0.6702482 186 7 0.906410 246 7 0.830357 155 7 0.8437763 111 7 0.8113258 402 7 0.7873690 170 7 0.812119 123 7 0.816668 408 7 0.7656418 480 7 0.6744608 410 7 0.915306 390 7 0.6182972 282 7 0.530829 198 7 0.1600000 210 2 0.6799172 89 5 0.792344 252 7 0.54238543 431 7 0.7574240 458 7 0.7588957 445 7 0.6022677 344 7 0.6731860 460 7 0.772099 401 7 0.8770365 0.769161 0.7641589 0.7947397 0.7631463 0.880475 0.822576 0.7714930 0.787377 0.837564 0.832717 0.747954 0.5371872 0.81268 0.755053 0.786663 0.6956418 0.7249683 0.719902 0.7215821 0.900836 0.7527026 0.898528 0.794216 0.8157722 0.7990394 0.7436047 0.803792 0.816963 0.7569211 0.6616148 0.912062 0.6024480 0.5253706 0.58933592 0.6535084 0.738595 0.5304200 0.7492037 0.7532208 0.6869429 0.6118692 0.732985 7 0.781513 0.795963 -2.5202e-02 7 0.739633 0.7924117 -0.05277903 0.98464362 0.04950418 weaklyHypometh 1.00000 1.000000 insignificant 0.9919043 0.11376208 insignificant 1 1.00000 insignificant -0.0400340 0.1731819 insignificant 1.00000 insignificant 0.781513 0.5410397 0.1670831 7 0.739633 0.6647592 0.07487352 5.2528e-09 0.8906957 weaklyHypermeth 9.3801e-08 1.00000 weaklyHypermeth 1.2345e-03 0.709679 weaklyHypermeth 1.8705e-02 1 weaklyHypermeth 0.20711802 6.5355e-02 insignificant 7.2988e-01 insignificant 0.781513 0.762334 0.05515346 7 0.7396327 0.712949 0.0266836 6.8990e-03 9.9569e-01 weaklyHypermeth 1.8646e-01 1.0000e+00 insignificant 1.4905e-03 9.9951e-01 weaklyHypermeth 7.4523e-02 1.0000e+00 weaklyHypermeth 0.04830552 2.4082e-01 insignificant 1.0000000 insignificant 0.795963 0.5410397 2.0136e-01 7 0.792412 0.6647592 0.12765255 4.9992e-09 0.897512 hypermethylated 9.8023e-08 1 hypermethylated 4.5486e-04 0.807552 hypermethylated 7.7095e-03 1 hypermethylated 0.2471520 3.6819e-02 weaklyHypermeth 4.4091e-01 insignificant 0.795963 0.7623340 0.08049521 7 0.7924117 0.7129491 0.07946261 7.7578e-05 9.9995e-01 weaklyHypermeth 2.9838e-03 1.0000e+00 weaklyHypermeth 1.5646e-04 9.9998e-01 weaklyHypermeth 9.7787e-03 1.0000000 weaklyHypermeth 0.0883395 5.5686e-02 insignificant 1.0000000 insignificant 0.5410397 0.7623340 -0.1021105 7 0.6647592 0.7129491 -0.04818993 2.3580e-01 4.0080e-03 weaklyHypometh 1.0000e+00 4.5601e-02 weaklyHypometh 0.4158232 1.3952e-01 insignificant 1.00000 1.0000e+00 insignificant -0.1588125 1.3938e-01 insignificant 1.0000e+00 insignificant chr7 2076235 2077235 25506 ENSG00000215135 0.778496 379 7 0.6039912 417 7 0.6956820 324 7 0.8426924 288 7 0.8293733 161 7 0.786898 592 9 0.748610 246 7 0.7317013 376 7 0.656662 332 8 0.699694 258 8 0.6904716 354 8 0.776525 123 7 0.8528490 305 7 0.80614 89 4 0.628560 274 7 0.711811 89 6 0.650000 66 5 0.6750070 342 7 0.763340 328 7 0.8620323 394 9 0.7060623 190 9 0.6648407 150 8 0.736946 294 7 0.715160 193 9 0.6563775 111 7 0.6425407 459 7 0.6429348 200 7 0.598225 196 9 0.781699 474 7 0.6437013 525 7 0.7225008 444 7 0.867817 448 7 0.6033939 410 7 0.694963 184 7 0.7046512 251 3 0.5902778 54 3 0.637872 258 9 0.67458520 482 7 0.6981088 280 7 0.6238233 332 7 0.7586260 258 7 0.8781757 303 6 0.621805 291 7 0.8229520 0.771861 0.8070906 0.8658055 0.9235544 0.845456 0.829576 0.8592247 0.812671 0.897756 0.827806 0.889641 0.8421787 0.84587 0.814199 0.865963 0.8208920 0.8185096 0.857968 0.8920241 0.864838 0.7933227 0.868117 0.833832 0.8300801 0.8577367 0.7912582 0.852566 0.827061 0.8480599 0.8403458 0.905710 0.7260386 0.8600419 0.78847575 0.6262072 0.812293 0.6485025 0.8687265 0.8316602 0.9053680 0.8261902 0.845641 6 0.842775 0.844378 -6.4674e-05 7 0.759913 0.6398365 0.12007686 0.49476267 0.40116682 insignificant 1.00000 1.000000 insignificant 0.3234054 0.60694683 insignificant 1 1.00000 insignificant 0.0412933 0.1455669 insignificant 1.00000 insignificant 0.842775 0.7260525 0.1235532 7 0.759913 0.5908834 0.16902994 1.5537e-11 0.9970187 weaklyHypermeth 2.9878e-10 1.00000 weaklyHypermeth 4.7487e-04 0.961748 weaklyHypermeth 8.2627e-03 1 weaklyHypermeth 0.08856982 4.5166e-03 weaklyHypermeth 9.2176e-02 weaklyHypermeth 0.842775 0.861928 -0.00446205 7 0.7599134 0.674908 0.0850053 6.5139e-01 7.0410e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.2380e-01 8.3046e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02341933 6.6428e-01 insignificant 1.0000000 insignificant 0.844378 0.7260525 1.2392e-01 7 0.639836 0.5908834 0.04895307 2.2041e-08 0.990527 weaklyHypermeth 4.1586e-07 1 weaklyHypermeth 1.0856e-02 0.808802 weaklyHypermeth 1.2924e-01 1 insignificant 0.0472766 1.2401e-01 insignificant 1.0000e+00 insignificant 0.844191 0.8613388 0.00561072 7 0.6271241 0.6135527 0.01357134 2.7545e-01 4.5929e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.6649e-01 7.6591e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0178739 7.4533e-01 insignificant 1.0000000 insignificant 0.7260525 0.8619275 -0.1276890 7 0.5908834 0.6749080 -0.08402460 9.9983e-01 1.8869e-04 weaklyHypometh 1.0000e+00 3.0109e-03 weaklyHypometh 0.9958751 4.8819e-02 weaklyHypometh 1.00000 5.1935e-01 insignificant -0.0651505 2.6001e-01 insignificant 1.0000e+00 insignificant chr7 2085935 2086935 25507 ENSG00000215135 0.903973 259 6 0.6712656 176 9 0.8002250 218 9 0.8544743 271 6 0.8574536 120 10 0.895132 394 8 0.807846 230 12 0.8502876 202 9 0.911575 175 8 0.903999 166 8 0.8935966 274 11 0.886046 127 9 0.7790873 258 13 0.87348 89 7 0.761532 176 7 0.859646 113 7 0.842815 65 3 0.7753318 334 7 0.838000 231 10 0.7693967 265 6 0.8431129 109 9 0.6380244 107 4 0.849777 236 10 0.728506 108 5 0.8930763 143 7 0.9009816 224 10 0.8272804 181 7 0.782719 121 4 0.878356 170 9 0.8741307 302 9 0.8365915 256 9 0.940720 271 9 0.8544651 188 9 0.808712 208 11 0.9871795 210 8 0.6638395 118 6 0.767470 147 8 0.82677901 252 11 0.6876074 333 8 0.8832205 241 6 0.7106966 241 6 0.6504772 242 7 0.731415 252 8 0.8724458 0.817290 0.7271620 0.8855676 0.9466751 0.909420 0.834489 0.8955938 0.852225 0.889823 0.890375 0.952824 0.7385583 0.81574 0.848434 0.789054 0.8411758 0.7751094 0.855452 0.8549256 0.896082 0.7832728 0.861697 0.887924 0.9140667 0.8709247 0.8345788 0.957768 0.827104 0.8709640 0.8908020 0.931860 0.8089100 0.5897239 0.97726915 0.4936773 0.938639 0.6528549 0.6899018 0.8187466 0.6838221 0.7593523 0.673487 4 0.838484 0.864452 -3.1298e-02 9 0.813084 0.7729403 0.04014340 0.98918804 0.00358349 weaklyHypometh 1.00000 0.255963 insignificant 0.9506775 0.03783943 weaklyHypometh 1 1.00000 insignificant 0.0039852 0.8869871 insignificant 1.00000 insignificant 0.838491 0.7871772 0.0515911 9 0.805344 0.6934128 0.11193142 2.5070e-01 0.0047792 inconclusive 1.0000e+00 0.79653 insignificant 9.5554e-01 0.032443 inconclusive 1.0000e+00 1 insignificant 0.01868404 6.9573e-01 insignificant 1.0000e+00 insignificant 0.838694 0.703591 0.13288005 6 0.8590338 0.776258 0.0827753 4.3196e-09 9.4100e-01 weaklyHypermeth 2.8798e-07 1.0000e+00 weaklyHypermeth 1.0182e-04 9.7504e-01 weaklyHypermeth 7.8326e-03 1.0000e+00 weaklyHypermeth 0.10407485 5.7127e-02 insignificant 1.0000000 insignificant 0.865169 0.7871772 8.6890e-02 9 0.838308 0.6934128 0.14489510 9.6058e-02 0.318539 insignificant 7.0116e-01 1 insignificant 6.4638e-01 0.420716 insignificant 1.0000e+00 1 insignificant 0.0146988 7.7405e-01 insignificant 1.0000e+00 insignificant 0.865887 0.7035905 0.16891899 6 0.8719728 0.7762585 0.09571434 4.7643e-10 9.9462e-01 weaklyHypermeth 5.2936e-08 1.0000e+00 weaklyHypermeth 2.5760e-07 9.9061e-01 weaklyHypermeth 4.2933e-05 1.0000000 weaklyHypermeth 0.1000896 6.8414e-02 insignificant 1.0000000 insignificant 0.7878788 0.7035905 0.0692504 6 0.7396403 0.7762585 -0.03661821 9.5422e-03 9.9961e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.0739542 9.9992e-01 insignificant 1.00000 1.0000e+00 insignificant 0.0853908 1.8158e-01 insignificant 1.0000e+00 insignificant chr7 2110935 2111935 25509 ENSG00000215135 0.851560 93 5 0.7607310 217 6 0.7940436 153 6 0.7882997 116 5 0.8276349 127 6 0.698871 286 7 0.797935 126 6 0.9193273 179 6 0.657891 190 6 0.827759 134 6 0.7798697 272 6 0.725510 96 6 0.7231471 188 6 0.89765 84 3 0.827743 132 6 0.560516 53 5 0.489583 37 4 0.9081872 105 3 0.785315 156 6 0.8443182 143 6 0.8902401 85 6 0.7670168 66 3 0.806103 101 5 0.854497 75 6 0.4678571 32 3 0.8164846 308 5 0.8058706 82 6 0.825893 89 3 0.905033 178 5 0.6774476 333 6 0.8254592 225 6 0.868773 179 6 0.4697913 295 6 0.274170 121 4 0.7859259 103 4 0.4166667 14 1 0.391712 128 7 0.14060020 214 7 0.6248016 57 5 0.8093750 60 5 0.7653319 67 4 0.4008523 82 5 0.682500 56 3 0.8334455 0.732792 0.8307670 0.8770458 0.8535496 0.849722 0.836360 0.8956439 0.876452 0.830425 0.925942 0.800437 0.8909998 0.87510 0.884398 0.787623 0.7310127 0.8490064 0.967103 0.9022024 0.928041 0.7332669 0.762357 0.960418 0.7641362 0.9258958 0.8234346 0.836347 0.873476 0.9558677 0.8206043 0.885140 0.4917753 0.2737505 0.54198312 0.2573840 0.453952 0.1552090 0.6275065 0.7292722 0.7221492 0.4776323 0.808544 3 0.855906 0.883801 -2.4258e-02 6 0.732443 0.7896172 -0.05717422 0.96700944 0.05361013 insignificant 1.00000 1.000000 insignificant 0.9163076 0.04348634 weaklyHypometh 1 1.00000 insignificant -0.0192618 0.6510399 insignificant 1.00000 insignificant 0.855906 0.4217143 0.4413232 6 0.732443 0.3483514 0.38409154 1.6892e-34 0.9999667 hypermethylated 7.3444e-33 1.00000 hypermethylated 4.7924e-09 0.999671 hypermethylated 1.7750e-07 1 hypermethylated 0.36015009 8.4770e-03 lowCoverage 1.5698e-01 lowCoverage 0.855906 0.663551 0.18803083 5 0.7324430 0.695660 0.0367830 4.5905e-11 4.0243e-01 weaklyHypermeth 3.5312e-09 1.0000e+00 weaklyHypermeth 1.8693e-04 3.2837e-01 weaklyHypermeth 1.3352e-02 1.0000e+00 weaklyHypermeth 0.11672230 1.8334e-01 lowCoverage 1.0000000 lowCoverage 0.883801 0.4217143 4.5842e-01 6 0.789617 0.3483514 0.44126575 9.2439e-24 1.000000 hypermethylated 3.6976e-22 1 hypermethylated 1.3050e-08 1.000000 hypermethylated 5.6737e-07 1 hypermethylated 0.3794119 6.0617e-03 lowCoverage 1.1233e-01 lowCoverage 0.883628 0.6614907 0.19931136 5 0.7944745 0.6183645 0.17611009 1.8346e-07 5.7390e-01 weaklyHypermeth 1.2845e-05 1.0000e+00 weaklyHypermeth 6.5833e-04 8.3366e-01 weaklyHypermeth 3.4649e-02 1.0000000 weaklyHypermeth 0.1359841 1.3765e-01 lowCoverage 1.0000000 lowCoverage 0.4217143 0.6635514 -0.2876602 5 0.3483514 0.6956600 -0.34730857 9.9971e-01 1.4877e-06 hypomethylated 1.0000e+00 3.6285e-05 hypomethylated 0.9972749 4.1569e-04 hypomethylated 1.00000 9.2376e-03 hypomethylated -0.2434278 6.1728e-02 lowCoverage 6.8943e-01 lowCoverage chr7 2115735 2116735 25510 ENSG00000215135 0.959910 85 5 0.8999836 241 7 0.5394380 208 7 0.9025124 80 5 0.7965807 60 3 0.985294 53 4 1.000000 29 3 0.9203297 108 3 0.853671 90 3 0.859602 87 3 0.9332265 108 3 0.916667 25 3 0.8991191 176 3 NA 0 0 0.940608 79 3 0.666667 8 0 1.000000 24 2 0.6437075 45 2 0.902948 138 3 0.8769841 51 4 0.7832739 40 3 0.5000000 4 0 0.835802 76 7 1.000000 43 2 1.0000000 2 0 0.9105159 242 8 0.9743590 30 3 1.000000 2 0 0.851904 138 3 0.9286203 284 7 0.9231760 231 7 0.897771 57 4 0.5927716 192 7 0.981365 114 3 0.5777972 71 6 0.5000000 2 0 0.933333 24 3 0.54010311 194 8 0.5597736 33 2 0.8485450 57 4 0.8095238 42 2 0.7142857 34 2 0.930283 43 2 0.8787879 0.925167 0.4126482 1.0000000 0.7572772 0.935829 1.000000 0.9313187 0.905438 0.838784 0.919143 0.954545 0.8944742 NA 0.937446 0.545455 1.0000000 1.0000000 0.889896 0.9105339 0.801693 0.7272727 0.909091 1.000000 0.9780647 0.9782717 0.9580420 1.000000 0.887224 0.9639754 0.9620515 0.927739 0.9769120 0.9897084 1.00000000 0.9880786 1.000000 0.9144189 0.3333333 1.0000000 NA 0.5454545 1.000000 0 0.854867 0.923345 -7.1372e-02 4 0.835811 0.8123361 0.02347462 0.99999914 0.00049136 lowCoverage 1.00000 0.089274 lowCoverage 0.9534306 0.25556205 lowCoverage 1 1.00000 lowCoverage -0.0155091 0.7565689 lowCoverage 1.00000 lowCoverage 0.854867 0.7671692 0.0152888 4 0.835811 0.5932053 0.24260545 1.6536e-06 0.6742926 lowCoverage 2.2909e-05 1.00000 lowCoverage 1.9028e-02 0.745022 lowCoverage 2.2126e-01 1 lowCoverage 0.18071448 9.3648e-02 lowCoverage 9.6545e-01 lowCoverage 0.854867 0.789474 0.07880648 1 0.8358107 0.790364 0.0454470 1.1011e-01 7.2362e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.5064e-01 7.6331e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.09579393 2.2043e-01 lowCoverage 1.0000000 lowCoverage 0.923345 0.7671692 1.1685e-01 5 0.812336 0.5932053 0.21913083 5.9637e-09 0.975054 weaklyHypermeth 1.1469e-07 1 weaklyHypermeth 3.8025e-03 0.915394 weaklyHypermeth 5.1385e-02 1 weaklyHypermeth 0.1962235 7.7494e-02 lowCoverage 7.9891e-01 lowCoverage 0.923345 0.7894737 0.15331209 1 0.8123361 0.7903637 0.02197241 7.0355e-04 9.6411e-01 lowCoverage 2.4260e-02 1.0000e+00 lowCoverage 8.5798e-02 5.2497e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 0.1113030 1.7999e-01 lowCoverage 1.0000000 lowCoverage 0.7671692 0.7894737 -0.0570030 1 0.5932053 0.7903637 -0.19715842 7.8922e-01 4.2446e-04 lowCoverage 1.0000e+00 5.8953e-03 lowCoverage 0.9989774 6.8647e-02 lowCoverage 1.00000 6.8647e-01 lowCoverage -0.0849205 4.4996e-01 lowCoverage 1.0000e+00 lowCoverage chr7 2399635 2400635 25519 EIF3B ENSG00000106263 0.758345 299 9 0.6727545 240 9 0.7327962 184 9 0.7669918 326 9 0.6674933 133 6 0.784705 369 9 0.632733 194 6 0.7719465 171 9 0.735842 185 9 0.814582 133 9 0.7093224 332 9 0.792284 78 6 0.7618243 218 9 0.74929 84 6 0.772556 155 8 0.845340 62 6 0.668504 299 5 0.7206649 356 9 0.690097 116 7 0.7489555 219 9 0.6555556 70 7 0.8376068 87 3 0.798010 200 6 0.708585 105 7 0.6437080 126 8 0.5967193 282 10 0.6664502 137 9 0.736631 79 3 0.697500 190 6 0.6783076 243 7 0.7499091 255 10 0.799655 257 9 0.5665418 238 7 0.534807 160 9 0.5946667 153 9 0.5888889 42 3 0.542669 205 9 0.57258749 248 9 0.6950302 277 9 0.6385531 322 9 0.6830053 279 9 0.6353524 235 9 0.722706 319 9 0.8752131 0.739291 0.8757441 0.8354462 0.8416942 0.876271 0.835390 0.9214909 0.833026 0.891940 0.816200 0.880376 0.8188146 0.81690 0.857798 0.854776 0.8687157 0.8531920 0.823641 0.8557296 0.822222 0.8666075 0.872336 0.830315 0.8362141 0.8547394 0.7961003 0.842715 0.799081 0.8644283 0.8285201 0.865226 0.6277087 0.4730180 0.69177436 0.6769231 0.543608 0.7294855 0.7492323 0.7830278 0.8071093 0.8079471 0.795867 4 0.825668 0.829473 7.9015e-03 9 0.723908 0.7018453 0.02206298 0.26449734 0.36687835 insignificant 1.00000 1.000000 insignificant 0.1958269 0.51897245 insignificant 1 1.00000 insignificant 0.0257981 0.2982943 insignificant 1.00000 insignificant 0.825668 0.6453155 0.1803832 9 0.723908 0.5150923 0.20881597 2.1828e-13 0.9998649 weaklyHypermeth 4.5476e-12 1.00000 weaklyHypermeth 1.0902e-04 0.999982 weaklyHypermeth 2.0190e-03 1 weaklyHypermeth 0.17315769 6.2869e-10 weaklyHypermeth 4.8361e-08 weaklyHypermeth 0.825668 0.786313 0.04538352 9 0.7239083 0.630127 0.0937817 4.8683e-03 6.2956e-01 weaklyHypermeth 1.4947e-01 1.0000e+00 insignificant 6.6619e-03 8.8164e-01 weaklyHypermeth 2.6647e-01 1.0000e+00 insignificant 0.06492173 1.2440e-02 weaklyHypermeth 0.3618851 insignificant 0.829473 0.6453155 1.8616e-01 9 0.701845 0.5150923 0.18675299 2.2159e-10 0.990225 weaklyHypermeth 4.7147e-09 1 weaklyHypermeth 7.6389e-04 0.985923 weaklyHypermeth 1.2523e-02 1 weaklyHypermeth 0.1473596 1.2846e-05 weaklyHypermeth 6.2892e-04 weaklyHypermeth 0.829473 0.7863128 0.04324879 9 0.7018453 0.6301265 0.07171876 4.3432e-02 8.8638e-01 weaklyHypermeth 8.8637e-01 1.0000e+00 insignificant 8.2523e-02 9.2431e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0391236 1.6631e-01 insignificant 1.0000000 insignificant 0.6453155 0.7863128 -0.1393490 9 0.5150923 0.6301265 -0.11503423 8.1901e-01 3.1070e-05 weaklyHypometh 1.0000e+00 5.9750e-04 weaklyHypometh 0.9325032 8.1187e-03 weaklyHypometh 1.00000 1.1598e-01 insignificant -0.1082360 1.0423e-03 weaklyHypometh 3.3623e-02 weaklyHypometh chr7 2457135 2458135 25524 ENSG00000175873 0.425880 601 17 0.3030860 533 18 0.3412062 534 15 0.3586110 676 16 0.3369598 444 17 0.401305 1000 17 0.399195 652 18 0.3352778 507 17 0.362915 714 14 0.321577 659 15 0.4146117 590 18 0.429452 393 15 0.2322805 818 17 0.33407 421 15 0.315204 621 16 0.350302 340 14 0.242065 240 9 0.3478913 794 15 0.290360 533 16 0.3416319 707 17 0.4521488 236 14 0.3321737 437 12 0.317690 488 17 0.372055 381 16 0.4453889 417 14 0.3429978 750 17 0.4105247 520 16 0.314550 329 14 0.282882 544 17 0.3072036 855 17 0.3468645 687 17 0.441416 656 17 0.0980493 599 18 0.097934 376 16 0.1150794 768 15 0.0929233 159 10 0.223753 448 16 0.13890959 590 16 0.4576570 679 15 0.3565975 615 17 0.2416165 493 14 0.2616377 545 14 0.444284 652 16 0.2510527 0.181591 0.1945371 0.1910353 0.1691645 0.247346 0.187456 0.2423320 0.194418 0.227970 0.297741 0.238641 0.0986624 0.24485 0.187700 0.272882 0.2094616 0.1976183 0.162406 0.1750069 0.313743 0.1554776 0.194362 0.297564 0.2057920 0.1744997 0.1894843 0.220048 0.250282 0.1806179 0.1459213 0.364364 0.0165111 0.0150311 0.01598963 0.0404885 0.040948 0.0556463 0.1666187 0.1822058 0.1237256 0.1516957 0.219068 11 0.263649 0.273406 -7.9767e-03 16 0.404083 0.4098628 -0.00577942 0.47799351 0.47449042 insignificant 1.00000 1.000000 insignificant 0.4900083 0.70242732 insignificant 1 1.00000 insignificant -0.0196304 0.3587997 insignificant 1.00000 insignificant 0.263422 0.0622873 0.2320383 16 0.338195 0.1637867 0.17440783 3.2273e-52 0.9999999 hypermethylated 2.9340e-50 1.00000 hypermethylated 3.6166e-25 1.000000 hypermethylated 9.0416e-23 1 hypermethylated 0.21641926 8.7909e-06 hypermethylated 4.3954e-04 hypermethylated 0.263511 0.172368 0.02819542 15 0.4143850 0.420450 -0.0060654 1.1126e-02 8.9769e-01 weaklyHypermeth 2.8527e-01 1.0000e+00 insignificant 2.1290e-03 9.8076e-01 weaklyHypermeth 9.6774e-02 1.0000e+00 weaklyHypermeth -0.00816445 8.6764e-01 insignificant 1.0000000 insignificant 0.273321 0.0625850 2.4031e-01 16 0.412894 0.1930226 0.21987173 1.5784e-37 1.000000 hypermethylated 9.8648e-36 1 hypermethylated 2.5032e-18 1.000000 hypermethylated 3.5760e-16 1 hypermethylated 0.2360497 1.4190e-06 hypermethylated 8.8685e-05 hypermethylated 0.273234 0.1729223 0.03694728 14 0.4310103 0.4708460 -0.03983573 3.5321e-02 9.7211e-01 weaklyHypermeth 7.4309e-01 1.0000e+00 insignificant 4.4187e-02 9.9895e-01 weaklyHypermeth 1.0000e+00 1.0000000 insignificant 0.0114660 8.2000e-01 insignificant 1.0000000 insignificant 0.0623085 0.1720899 -0.1401467 14 0.1719760 0.3914729 -0.21949691 1.0000e+00 6.7656e-24 weaklyHypometh 1.0000e+00 5.2043e-22 weaklyHypometh 1.0000000 1.7594e-10 weaklyHypometh 1.00000 1.7594e-08 weaklyHypometh -0.2245837 4.4662e-03 weaklyHypometh 9.7091e-02 weaklyHypometh chr7 2483735 2484735 25525 ENSG00000175873 0.498805 231 9 0.2506216 169 8 0.2575077 259 8 0.5492915 257 9 0.3229897 179 6 0.578695 430 6 0.223330 145 6 0.3691457 116 6 0.240644 180 6 0.270130 90 5 0.4255952 42 4 0.358333 33 5 0.2487178 130 5 0.40370 126 5 0.250943 202 5 0.555556 51 5 NA 0 0 0.2004214 401 6 0.338280 344 6 0.3518025 313 8 0.4191964 86 6 0.2333333 14 2 0.434187 129 8 0.291114 92 6 0.3333333 29 3 0.4288411 411 11 0.2074859 136 6 0.388889 48 2 0.369327 192 6 0.5539830 255 11 0.5069975 351 8 0.600422 248 6 0.0477352 242 8 0.055180 349 6 0.1428571 203 6 NA 0 0 0.138853 108 6 0.42013690 443 8 0.3781501 285 6 0.4167477 244 9 0.3609782 77 5 0.1330471 661 6 0.457055 178 6 0.2610883 0.248508 0.2600790 0.2064590 0.2209730 0.293709 0.202614 0.2734440 0.173472 0.176666 0.334268 0.346281 0.1420214 0.30940 0.190788 0.445592 NA 0.1369402 0.244224 0.1766363 0.485852 0.2541892 0.285280 0.232690 0.2024793 0.2182910 0.2157287 0.350781 0.298052 0.2458465 0.2163184 0.521883 0.0440801 0.0298191 0.00000000 NA 0.014740 0.0487986 0.1665083 0.2144533 0.1008023 0.1182933 0.208533 3 0.251894 0.324447 -5.9934e-02 7 0.404467 0.4893595 -0.08489298 0.99914931 0.03220123 weaklyHypometh 1.00000 0.934089 insignificant 0.9959676 0.60757320 insignificant 1 1.00000 insignificant -0.0449167 0.3224609 insignificant 1.00000 insignificant 0.252577 0.0409226 0.2074214 7 0.429746 0.3592239 0.07052180 1.0592e-13 0.7728805 hypermethylated 2.2536e-12 1.00000 hypermethylated 2.2408e-07 0.994802 hypermethylated 6.2244e-06 1 hypermethylated 0.19138989 4.4054e-02 weaklyHypermeth 5.5035e-01 insignificant 0.252165 0.187543 0.06776007 6 0.4632901 0.300407 0.1628832 1.1643e-01 9.8012e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.4617e-01 9.8928e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00314669 9.6172e-01 insignificant 1.0000000 insignificant 0.324937 0.0409226 2.6545e-01 8 0.519944 0.3592239 0.16072059 4.8097e-09 0.983111 hypermethylated 9.6194e-08 1 hypermethylated 3.4920e-06 0.998170 hypermethylated 9.4378e-05 1 hypermethylated 0.2363066 2.0127e-02 weaklyHypermeth 2.7223e-01 insignificant 0.324107 0.1876731 0.12963263 6 0.4574445 0.3191823 0.13826222 1.0142e-02 9.9952e-01 weaklyHypermeth 2.6689e-01 1.0000e+00 insignificant 6.3469e-02 9.9974e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0480634 4.9175e-01 insignificant 1.0000000 insignificant 0.0409836 0.1880638 -0.1395036 6 0.3831722 0.3404611 0.04271107 9.5198e-01 3.5749e-04 weaklyHypometh 1.0000e+00 5.0351e-03 weaklyHypometh 0.9869175 8.9436e-03 weaklyHypometh 1.00000 1.2251e-01 insignificant -0.1882432 6.6677e-02 insignificant 7.3272e-01 insignificant chr7 2535635 2536635 25528 LFNG ENSG00000106003 0.657723 373 10 0.5287192 198 10 0.7229302 273 10 0.8650008 348 7 0.8199743 209 10 0.867240 463 10 0.684989 262 10 0.8525263 246 10 0.733214 277 10 0.836596 318 10 0.6799145 320 10 0.778431 159 10 0.7687022 291 10 0.72213 125 6 0.620895 251 13 0.688399 95 8 0.811111 54 7 0.6320277 535 6 0.665127 202 10 0.7661425 365 10 0.8511308 214 10 0.6335330 206 10 0.830608 316 10 0.609512 124 9 0.7681505 173 10 0.7913647 222 10 0.6071705 275 10 0.692559 157 8 0.813590 249 10 0.7257117 231 10 0.8004527 224 10 0.851186 391 10 0.3090194 253 10 0.244739 341 10 0.0000000 40 5 0.2016687 68 7 0.306624 214 10 0.18748766 356 10 0.7949279 355 10 0.8327826 319 10 0.8211861 318 10 0.8101510 381 10 0.763569 316 10 0.8579939 0.710806 0.7634326 0.8881135 0.8366752 0.897989 0.850283 0.8269846 0.872196 0.875026 0.827791 0.810854 0.7822801 0.78118 0.835457 0.904844 0.7567447 0.6260753 0.829525 0.8680274 0.846670 0.7829958 0.843573 0.840730 0.7983138 0.7990558 0.8127911 0.880861 0.834825 0.8797907 0.8272836 0.879433 0.2676975 0.2253284 0.00749139 0.1345100 0.265037 0.1162016 0.8335438 0.8393315 0.8463148 0.8240440 0.761957 9 0.816334 0.833573 -1.7716e-02 10 0.640827 0.6390591 0.00176814 0.73399312 0.15507829 insignificant 1.00000 1.000000 insignificant 0.6566657 0.43041051 insignificant 1 1.00000 insignificant -0.0128245 0.7060550 insignificant 1.00000 insignificant 0.817486 0.2099057 0.6058462 10 0.677563 0.2466897 0.43087320 9.2840e-73 0.9999902 hypermethylated 1.0316e-70 1.00000 hypermethylated 1.1246e-22 0.999974 hypermethylated 1.6066e-20 1 hypermethylated 0.52683318 1.5883e-05 hypermethylated 6.9059e-04 hypermethylated 0.821905 0.825933 -0.00033172 10 0.8059326 0.807279 -0.0013468 3.8057e-01 2.8645e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.2684e-01 4.2528e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.06943373 7.9759e-03 weaklyHypometh 0.2750312 insignificant 0.834773 0.2099057 6.1960e-01 10 0.692314 0.2466897 0.44562438 6.7863e-68 1.000000 hypermethylated 1.3573e-65 1 hypermethylated 2.3117e-19 0.999938 hypermethylated 3.8529e-17 1 hypermethylated 0.5396576 5.7433e-06 hypermethylated 3.1907e-04 hypermethylated 0.838640 0.8259325 0.01484897 10 0.8164911 0.8072794 0.00921177 3.2325e-01 7.2934e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.0112e-01 7.1801e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0566093 7.2044e-02 insignificant 1.0000000 insignificant 0.2097792 0.8259325 -0.6156780 10 0.2460276 0.8072794 -0.56125177 1.0000e+00 2.4105e-43 hypomethylated 1.0000e+00 6.0262e-41 hypomethylated 1.0000000 1.2944e-14 hypomethylated 1.00000 3.2360e-12 hypomethylated -0.5962669 2.5796e-05 hypomethylated 4.2994e-03 hypomethylated chr7 2629935 2630935 25532 IQCE ENSG00000106012 0.896332 145 6 0.7659704 172 6 0.9031641 277 5 0.8918651 158 6 0.8668870 177 5 0.945794 280 6 0.772917 154 6 0.9086070 114 6 0.921864 192 5 0.940860 175 5 0.7878708 205 6 0.925248 142 5 0.7890938 170 5 0.94682 140 5 0.804601 171 5 0.801818 121 5 0.766667 18 1 0.7356202 168 6 0.910627 145 6 0.8650214 137 6 0.7930827 73 6 0.8891636 74 5 0.915168 106 6 0.743734 103 6 0.9021164 101 6 0.9326632 193 6 0.7033015 147 6 0.831767 94 5 0.761700 106 6 0.8824497 224 6 0.8624465 217 6 0.774955 213 6 0.8117260 173 6 0.750403 92 6 0.9876543 291 6 0.6458333 16 2 0.841084 155 6 0.72482147 214 7 0.9307118 104 6 0.9199460 125 7 0.9155612 115 7 0.8026059 87 5 0.884759 110 6 0.9081451 0.815631 0.8767967 0.9112911 0.8483633 0.936906 0.774883 0.8815958 0.882778 0.924247 0.919753 0.904997 0.8444828 0.92125 0.927299 0.791842 0.7492562 0.9075358 0.926669 0.9237830 0.902640 0.8672374 0.900690 0.881870 0.9073723 0.9208032 0.7616170 0.874560 0.872069 0.8954309 0.8621108 0.887890 0.8497892 0.8638997 0.98523440 0.8450606 0.876631 0.8144616 0.8963324 0.9207198 0.9142541 0.8365164 0.888257 5 0.897167 0.874621 1.7571e-02 6 0.840634 0.7981819 0.04245256 0.04335365 0.98477019 weaklyHypermeth 1.00000 1.000000 insignificant 0.1283547 0.95695140 insignificant 1 1.00000 insignificant 0.0246700 0.3703169 insignificant 1.00000 insignificant 0.896287 0.8512221 0.0329423 6 0.815101 0.7692348 0.04586573 5.7696e-02 0.8542998 insignificant 4.4043e-01 1.00000 insignificant 3.7185e-01 0.460101 insignificant 1.0000e+00 1 insignificant 0.06379539 2.5158e-01 insignificant 1.0000e+00 insignificant 0.896711 0.875926 0.00666616 6 0.7526006 0.896587 -0.1439863 4.2791e-01 5.2012e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.2612e-01 3.0781e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03333453 2.7046e-01 insignificant 1.0000000 insignificant 0.874621 0.8557692 1.7030e-02 6 0.798182 0.8791255 -0.08094367 6.3557e-01 0.425941 insignificant 1.0000e+00 1 insignificant 6.2880e-01 0.123923 insignificant 1.0000e+00 1 insignificant 0.0391254 4.8053e-01 insignificant 1.0000e+00 insignificant 0.878123 0.8793103 -0.00656898 6 0.8812122 0.9013315 -0.02011938 8.7287e-01 9.5038e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 8.8821e-01 1.5728e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0580045 9.6524e-02 insignificant 1.0000000 insignificant 0.8509052 0.8756957 -0.0411783 6 0.7362684 0.8818136 -0.14554521 9.5835e-01 1.3549e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.7657507 2.9678e-01 insignificant 1.00000 1.0000e+00 insignificant -0.0971299 1.0985e-01 insignificant 1.0000e+00 insignificant chr7 2646235 2647235 25533 TTYH3 ENSG00000136295 0.755556 38 5 0.7200000 39 5 0.6200000 16 2 0.8650794 38 6 1.0000000 3 0 0.984848 39 3 NA 0 0 0.9089286 56 5 0.905556 22 2 1.000000 17 0 0.8948413 77 5 0.700000 10 2 0.9749539 111 5 NA 0 0 0.628571 28 3 NA 0 0 1.000000 3 0 0.7008333 49 5 0.882446 86 5 0.7500000 22 2 0.9333333 23 3 0.9100000 34 5 0.700000 18 0 0.566667 13 2 0.9800000 52 5 0.9439380 168 5 0.9555556 17 1 0.875000 7 0 0.941440 103 5 0.9104264 142 5 0.8849784 171 5 0.944444 33 2 0.8000000 12 1 0.930000 103 5 1.0000000 21 3 0.7500000 4 0 0.966667 25 3 0.89642857 98 5 0.6333333 14 0 0.9166667 27 2 0.8000000 32 6 0.6666667 4 0 0.738889 30 5 1.0000000 1.000000 1.0000000 1.0000000 1.0000000 1.000000 NA 1.0000000 0.777778 1.000000 0.964286 0.800000 0.9756098 NA 0.750000 NA 1.0000000 0.9375000 1.000000 0.8333333 1.000000 1.0000000 1.000000 NA 0.9000000 0.9850746 0.7777778 1.000000 0.978261 0.8666667 0.8928571 0.833333 1.0000000 1.0000000 NA 0.0000000 1.000000 1.0000000 0.5000000 0.7500000 1.0000000 1.0000000 0.666667 0 0.864780 0.911652 -4.5791e-02 2 0.841029 0.9070204 -0.06599188 0.85346252 0.02918841 lowCoverage 1.00000 0.912138 lowCoverage 0.9118765 0.13550504 lowCoverage 1 1.00000 lowCoverage -0.0381320 0.4348390 lowCoverage 1.00000 lowCoverage 0.864780 0.9467681 -0.0873900 2 0.841029 0.9357051 -0.09467653 9.9795e-01 0.0193330 lowCoverage 1.0000e+00 1.00000 lowCoverage 9.9928e-01 0.013760 lowCoverage 1.0000e+00 1 lowCoverage -0.04983271 3.5174e-01 lowCoverage 1.0000e+00 lowCoverage 0.862385 0.766355 0.03938316 2 0.8304868 0.742414 0.0880733 2.4932e-03 3.9893e-01 lowCoverage 8.5973e-02 1.0000e+00 lowCoverage 1.9721e-01 1.9696e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.08957205 1.7621e-01 lowCoverage 1.0000000 lowCoverage 0.911652 0.9467681 -3.7174e-02 5 0.907020 0.9357051 -0.02868465 8.3524e-01 0.105704 insignificant 1.0000e+00 1 insignificant 9.7932e-01 0.090365 insignificant 1.0000e+00 1 insignificant -0.0117007 8.2895e-01 lowCoverage 1.0000e+00 lowCoverage 0.911652 0.8510638 0.05924043 2 0.9070204 0.8601270 0.04689346 2.7844e-02 6.1096e-01 lowCoverage 6.3283e-01 1.0000e+00 lowCoverage 6.0406e-01 4.6412e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 0.1277041 7.0980e-02 lowCoverage 1.0000000 lowCoverage 0.9467681 0.8510638 0.0991091 2 0.9357051 0.8601270 0.07557811 1.6074e-02 2.7323e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.3225954 7.2625e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.1394048 6.1657e-02 lowCoverage 6.8943e-01 lowCoverage chr7 2723135 2724135 25534 AMZ1 ENSG00000174945 0.917540 345 16 0.7317909 386 15 0.4179269 207 13 0.9073153 487 16 0.8993056 91 6 0.834607 726 17 0.787560 191 6 0.9129973 235 17 0.778629 124 8 0.871528 98 8 0.8919957 407 19 0.650980 66 6 0.8330949 127 10 0.98500 42 1 0.810049 91 4 0.773301 55 6 0.743056 39 2 0.7448140 567 18 0.807693 331 17 0.8000340 388 15 0.8603922 119 10 0.6919303 120 11 0.913604 329 17 0.837469 132 11 0.9055391 216 14 0.9055127 391 20 0.9041570 182 11 0.894345 50 1 0.877770 273 15 0.9384929 489 19 0.8595025 430 16 0.749809 405 15 0.6433847 299 16 0.748000 277 19 0.7932047 532 11 0.7866667 43 4 0.759289 292 14 0.75664025 412 12 0.6829360 235 10 0.6726478 356 19 0.6619441 457 20 0.5589253 500 17 0.700578 458 20 0.9398663 0.852928 0.4167195 0.8849362 0.9609839 0.885289 0.923510 0.8637894 0.808361 0.936387 0.923893 0.639186 0.9452238 0.87728 0.954835 0.873849 0.8697837 0.7599229 0.912703 0.9502440 0.867684 0.6887209 0.900452 0.878105 0.9176415 0.9638563 0.9329937 0.908049 0.910105 0.9531034 0.9442594 0.883586 0.5691736 0.6785427 0.72116023 0.6124179 0.732187 0.5434203 0.7890056 0.6580315 0.5772377 0.5595470 0.696203 2 0.874124 0.916160 -3.8499e-02 15 0.806255 0.9052397 -0.09898424 0.99689958 0.00054360 weaklyHypometh 1.00000 0.089274 weaklyHypometh 0.9987565 0.00472422 weaklyHypometh 1 0.59053 insignificant -0.0565827 0.1081681 insignificant 1.00000 insignificant 0.874299 0.6618123 0.1830486 13 0.839849 0.7896264 0.05022311 4.1758e-08 0.5687143 weaklyHypermeth 6.9597e-07 1.00000 weaklyHypermeth 4.7413e-02 0.432106 weaklyHypermeth 4.7892e-01 1 insignificant 0.05709681 1.1829e-01 insignificant 1.0000e+00 insignificant 0.874299 0.707731 0.15679883 16 0.8398495 0.639620 0.2002293 3.0876e-20 9.7713e-01 weaklyHypermeth 5.1461e-18 1.0000e+00 weaklyHypermeth 1.5484e-09 9.9432e-01 weaklyHypermeth 1.9354e-07 1.0000e+00 weaklyHypermeth 0.14955469 1.0621e-03 weaklyHypermeth 0.0817022 weaklyHypermeth 0.915840 0.6614555 2.2851e-01 14 0.865240 0.7580413 0.10719843 2.4072e-10 0.934721 hypermethylated 5.0150e-09 1 hypermethylated 5.5847e-03 0.967280 weaklyHypermeth 7.0423e-02 1 weaklyHypermeth 0.1136795 2.4452e-03 weaklyHypermeth 5.5572e-02 weaklyHypermeth 0.915786 0.7082294 0.20644887 17 0.8596247 0.6812869 0.17833784 2.6944e-31 9.9646e-01 hypermethylated 1.3472e-28 1.0000e+00 hypermethylated 1.2226e-13 9.9970e-01 hypermethylated 6.1128e-11 1.0000000 hypermethylated 0.2061374 9.2346e-05 hypermethylated 0.0230865 hypermethylated 0.6616298 0.7080838 -0.0491003 13 0.7804797 0.6674298 0.11304989 2.7238e-09 2.1395e-01 inconclusive 2.7238e-06 1.0000e+00 inconclusive 0.0015257 9.1996e-01 inconclusive 0.76284 1.0000e+00 insignificant 0.0924579 2.2735e-02 weaklyHypermeth 3.1751e-01 insignificant chr7 3187035 3188035 25554 ENSG00000217455 0.941082 478 9 0.8263305 47 3 0.8104396 78 3 0.9502448 335 9 0.8481481 57 5 0.936767 355 9 0.859881 63 5 0.9494124 104 7 0.961874 53 3 0.981481 39 3 0.9213234 235 9 0.961667 45 3 0.9777184 83 3 NA 0 0 0.942029 73 3 1.000000 22 3 0.752137 31 3 0.8623377 358 9 0.874971 63 3 0.9357220 298 9 0.5777778 21 3 0.9142177 92 3 0.979167 85 3 0.899758 47 3 0.9580018 244 9 0.9774775 152 9 0.9527868 107 7 0.684848 40 3 0.890909 241 9 0.9585836 234 9 0.9573655 144 9 0.923560 318 9 0.0262626 76 3 0.030303 54 3 0.0000000 40 1 0.0453384 317 9 0.026066 210 9 0.18169580 216 9 0.8988557 264 9 0.8816206 120 3 0.8633082 123 3 0.8991770 417 9 0.850430 219 9 0.8482891 0.821269 0.8913793 0.8997223 0.9402299 0.897835 0.894356 0.9203196 0.961010 0.980077 0.946650 0.938333 0.9690823 NA 0.943928 1.000000 0.7586207 0.8373495 0.830407 0.9086864 0.828506 0.8027718 0.979957 0.895027 0.9287732 0.9400524 0.9516458 0.863574 0.847770 0.9278676 0.9361280 0.908829 0.0263741 0.0291536 0.03672853 0.0772889 0.054677 0.0162539 0.8687954 0.8784599 0.8649974 0.9000160 0.835885 3 0.917288 0.928530 -9.4448e-03 9 0.934440 0.9414735 -0.00703308 0.93638555 0.31468849 insignificant 1.00000 1.000000 insignificant 0.8748709 0.48029055 insignificant 1 1.00000 insignificant 0.0206498 0.6090026 insignificant 1.00000 insignificant 0.917229 0.0385039 0.8789213 9 0.927156 0.0420980 0.88505798 3.0715e-93 1.0000000 hypermethylated 6.1430e-91 1.00000 hypermethylated 1.0880e-14 1.000000 hypermethylated 6.3999e-13 1 hypermethylated 0.85857664 9.3103e-10 hypermethylated 6.6502e-08 hypermethylated 0.917229 0.883640 0.03403512 9 0.9271560 0.887147 0.0400090 1.2024e-03 9.9477e-01 weaklyHypermeth 4.6141e-02 1.0000e+00 weaklyHypermeth 1.8297e-03 9.9995e-01 weaklyHypermeth 8.7130e-02 1.0000e+00 weaklyHypermeth 0.03150944 9.8609e-02 insignificant 1.0000000 insignificant 0.927991 0.0395604 8.8778e-01 9 0.891473 0.1378882 0.75358526 4.0686e-74 1.000000 hypermethylated 1.3562e-71 1 hypermethylated 9.1752e-13 1.000000 hypermethylated 5.7345e-11 1 hypermethylated 0.8379268 3.3643e-12 hypermethylated 5.6071e-10 hypermethylated 0.928488 0.8836395 0.04520270 9 0.9349705 0.8871470 0.04782354 5.9467e-04 9.9924e-01 weaklyHypermeth 2.2025e-02 1.0000e+00 weaklyHypermeth 1.5020e-03 9.9999e-01 weaklyHypermeth 7.1525e-02 1.0000000 weaklyHypermeth 0.0108596 7.7777e-01 insignificant 1.0000000 insignificant 0.0385039 0.8836395 -0.8441876 9 0.0420980 0.8871470 -0.84504896 1.0000e+00 1.3832e-44 hypomethylated 1.0000e+00 6.9158e-42 hypomethylated 1.0000000 2.3394e-08 hypomethylated 1.00000 1.4621e-06 hypomethylated -0.8270672 6.3179e-08 hypomethylated 3.1589e-05 hypomethylated chr7 4625535 4626535 25564 SDK1 ENSG00000146555 0.600842 104 6 0.5993464 73 5 0.6071429 22 0 0.5547619 110 5 0.7619048 26 3 0.696600 196 5 0.666667 16 0 0.7670330 75 5 0.645833 31 3 0.673280 40 5 0.7344061 171 6 0.200000 7 0 0.7401709 47 5 0.73889 28 5 0.698413 29 3 0.666667 6 0 0.625000 15 1 0.6705051 97 6 0.579823 115 5 0.6289931 125 6 0.8054545 31 3 0.6722222 31 2 0.590260 49 5 0.493056 23 2 0.5000000 9 0 0.5367205 134 6 0.6396199 40 2 0.777778 8 0 0.642965 110 6 0.5778714 154 5 0.6272603 147 6 0.672114 183 6 0.5330660 66 5 0.542277 93 6 0.5898268 115 5 0.3000000 9 0 0.440659 44 4 0.72310206 135 5 0.5952381 55 5 0.5905008 133 6 0.6980159 75 5 0.8154762 36 5 0.748872 101 5 0.7462086 0.740663 0.5654762 0.7884127 0.7976190 0.728836 0.809524 0.8003663 0.690476 0.673280 0.803412 0.247534 0.7518315 0.76032 0.858844 0.754687 0.7531843 0.7664605 0.723400 0.7726852 0.743427 0.8051873 0.726562 0.632937 0.6881325 0.6961475 0.6697140 0.873016 0.749510 0.7279339 0.7169479 0.766936 0.6473724 0.6499259 0.71706865 0.3663690 0.515385 0.7901135 0.7270408 0.7097857 0.7497166 0.8151927 0.793860 0 0.717081 0.715996 2.3005e-02 5 0.579758 0.5592180 0.02053988 0.38002423 0.94663017 insignificant 1.00000 1.000000 insignificant 0.7241601 0.91155981 insignificant 1 1.00000 insignificant 0.0148704 0.7067170 lowCoverage 1.00000 lowCoverage 0.717929 0.6731602 0.0591207 5 0.632288 0.5713700 0.06091810 5.9419e-02 0.9358235 insignificant 4.4545e-01 1.00000 insignificant 6.2276e-03 0.995231 weaklyHypermeth 8.0879e-02 1 weaklyHypermeth 0.12132531 9.8718e-02 lowCoverage 9.8718e-01 lowCoverage 0.717929 0.692500 0.00649789 5 0.6322881 0.745048 -0.1127599 4.3450e-01 7.8376e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.0912e-01 6.7207e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04680675 3.9099e-01 lowCoverage 1.0000000 lowCoverage 0.715996 0.6739130 3.4095e-02 5 0.559218 0.5815657 -0.02234777 2.6196e-01 0.769005 insignificant 1.0000e+00 1 insignificant 2.3816e-02 0.974247 weaklyHypermeth 2.5336e-01 1 insignificant 0.1064549 1.4102e-01 lowCoverage 1.0000e+00 lowCoverage 0.715996 0.6909548 -0.02101259 5 0.5592180 0.7086263 -0.14940832 5.9935e-01 2.7628e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.4229e-01 2.8064e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0616772 2.7150e-01 lowCoverage 1.0000000 lowCoverage 0.6731602 0.6925000 -0.0529767 5 0.5713700 0.7450480 -0.17367798 9.6633e-01 2.8095e-02 weaklyHypometh 1.0000e+00 2.5541e-01 insignificant 0.9987462 1.4604e-02 weaklyHypometh 1.00000 1.8030e-01 insignificant -0.1681321 4.6896e-02 lowCoverage 5.6344e-01 lowCoverage chr7 4626235 4627235 25565 SDK1 ENSG00000146555 0.600842 104 6 0.5993464 73 5 0.6071429 22 0 0.5547619 110 5 0.7619048 26 3 0.696600 196 5 0.666667 16 0 0.7670330 75 5 0.645833 31 3 0.673280 40 5 0.7344061 171 6 0.200000 7 0 0.7401709 47 5 0.73889 28 5 0.698413 29 3 0.666667 6 0 0.625000 15 1 0.6705051 97 6 0.579823 115 5 0.6289931 125 6 0.8054545 31 3 0.6722222 31 2 0.590260 49 5 0.493056 23 2 0.5000000 9 0 0.5367205 134 6 0.6396199 40 2 0.777778 8 0 0.642965 110 6 0.5778714 154 5 0.6272603 147 6 0.672114 183 6 0.5330660 66 5 0.542277 93 6 0.5898268 115 5 0.3000000 9 0 0.440659 44 4 0.72310206 135 5 0.5952381 55 5 0.5905008 133 6 0.6980159 75 5 0.8154762 36 5 0.748872 101 5 0.7462086 0.740663 0.5654762 0.7884127 0.7976190 0.728836 0.809524 0.8003663 0.690476 0.673280 0.803412 0.247534 0.7518315 0.76032 0.858844 0.754687 0.7531843 0.7664605 0.723400 0.7726852 0.743427 0.8051873 0.726562 0.632937 0.6881325 0.6961475 0.6697140 0.873016 0.749510 0.7279339 0.7169479 0.766936 0.6473724 0.6499259 0.71706865 0.3663690 0.515385 0.7901135 0.7270408 0.7097857 0.7497166 0.8151927 0.793860 0 0.717081 0.715996 2.3005e-02 5 0.579758 0.5592180 0.02053988 0.38002423 0.94663017 insignificant 1.00000 1.000000 insignificant 0.7241601 0.91155981 insignificant 1 1.00000 insignificant 0.0148704 0.7067170 lowCoverage 1.00000 lowCoverage 0.717929 0.6731602 0.0591207 5 0.632288 0.5713700 0.06091810 5.9419e-02 0.9358235 insignificant 4.4545e-01 1.00000 insignificant 6.2276e-03 0.995231 weaklyHypermeth 8.0879e-02 1 weaklyHypermeth 0.12132531 9.8718e-02 lowCoverage 9.8718e-01 lowCoverage 0.717929 0.692500 0.00649789 5 0.6322881 0.745048 -0.1127599 4.3450e-01 7.8376e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.0912e-01 6.7207e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04680675 3.9099e-01 lowCoverage 1.0000000 lowCoverage 0.715996 0.6739130 3.4095e-02 5 0.559218 0.5815657 -0.02234777 2.6196e-01 0.769005 insignificant 1.0000e+00 1 insignificant 2.3816e-02 0.974247 weaklyHypermeth 2.5336e-01 1 insignificant 0.1064549 1.4102e-01 lowCoverage 1.0000e+00 lowCoverage 0.715996 0.6909548 -0.02101259 5 0.5592180 0.7086263 -0.14940832 5.9935e-01 2.7628e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.4229e-01 2.8064e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0616772 2.7150e-01 lowCoverage 1.0000000 lowCoverage 0.6731602 0.6925000 -0.0529767 5 0.5713700 0.7450480 -0.17367798 9.6633e-01 2.8095e-02 weaklyHypometh 1.0000e+00 2.5541e-01 insignificant 0.9987462 1.4604e-02 weaklyHypometh 1.00000 1.8030e-01 insignificant -0.1681321 4.6896e-02 lowCoverage 5.6344e-01 lowCoverage chr7 4692935 4693935 25569 FOXK1 ENSG00000164916 0.616879 174 12 0.6444416 212 11 0.4164286 79 8 0.7292250 135 9 0.7333745 109 9 0.575759 189 12 0.521215 101 10 0.6684444 179 11 0.567113 81 9 0.658442 87 9 0.7813797 264 12 0.641026 29 0 0.6186508 91 10 0.65888 78 5 0.573960 65 6 0.716667 33 1 0.288889 15 1 0.5847660 156 9 0.551190 76 5 0.5839079 148 10 0.6188095 66 6 0.7777778 31 0 0.741744 77 10 0.670418 86 10 0.7954649 115 7 0.7806200 180 10 0.6607987 110 9 0.511565 44 2 0.650999 124 11 0.6968022 198 11 0.7437366 143 11 0.633596 193 12 0.6125888 161 11 0.547200 104 10 0.6701318 153 9 0.6833333 40 6 0.551154 160 11 0.61407404 125 11 0.6187500 91 8 0.6178645 135 9 0.6641668 160 10 0.6279762 49 4 0.643553 164 10 0.7037217 0.719337 0.4233351 0.8577396 0.7788440 0.757588 0.547515 0.7341023 0.681078 0.762474 0.699361 0.626566 0.7388262 0.70650 0.679921 0.630827 0.5365268 0.7125501 0.669799 0.6850437 0.776450 0.8469888 0.788042 0.757302 0.8605148 0.7712463 0.6461429 0.556212 0.762909 0.7000991 0.6571477 0.727492 0.5590939 0.5120462 0.67218569 0.7619579 0.637142 0.6256298 0.7330827 0.7416591 0.7047072 0.7697368 0.676295 0 0.693780 0.709583 -3.2596e-02 10 0.608803 0.6620152 -0.05321233 0.97853650 0.18982391 insignificant 1.00000 1.000000 insignificant 0.9997727 0.01423517 weaklyHypometh 1 1.00000 insignificant -0.0836624 0.0222836 weaklyHypometh 1.00000 insignificant 0.693780 0.5633423 0.1108230 10 0.608803 0.5702115 0.03859139 1.4411e-03 0.9931215 weaklyHypermeth 1.5011e-02 1.00000 weaklyHypermeth 3.7915e-01 0.851514 insignificant 1.0000e+00 1 insignificant -0.00654833 8.5053e-01 insignificant 1.0000e+00 insignificant 0.693316 0.696160 0.00005253 9 0.5987398 0.589637 0.0091027 2.2351e-01 4.1958e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.5442e-01 3.0044e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02793007 3.0327e-01 insignificant 1.0000000 insignificant 0.709583 0.5633423 1.4752e-01 10 0.662015 0.5702115 0.09180372 5.4983e-04 0.999928 weaklyHypermeth 6.3198e-03 1 weaklyHypermeth 5.8249e-02 0.999785 insignificant 5.5475e-01 1 insignificant 0.0771141 3.6884e-02 weaklyHypermeth 4.4091e-01 insignificant 0.708731 0.6961603 0.02972486 9 0.6442265 0.5896372 0.05458932 1.0847e-01 8.4599e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.5076e-02 9.5761e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0557323 4.6778e-02 weaklyHypermeth 1.0000000 insignificant 0.5627530 0.6961603 -0.1074162 9 0.5475910 0.5896372 -0.04204618 9.2730e-01 2.6788e-02 weaklyHypometh 1.0000e+00 2.4803e-01 insignificant 0.8657298 5.5198e-01 insignificant 1.00000 1.0000e+00 insignificant -0.0213817 4.2247e-01 insignificant 1.0000e+00 insignificant chr7 4717735 4718735 25571 ENSG00000209998 0.873503 178 6 0.8671032 103 6 0.5824564 90 6 0.9552375 255 5 0.8750000 31 3 0.927096 318 6 0.842659 60 5 0.8566017 75 6 0.876944 107 6 0.951058 73 5 0.9122720 143 6 0.833333 26 4 0.9380952 105 6 0.87576 23 2 0.810426 78 5 0.950000 15 0 0.913105 42 3 0.8779672 299 6 0.925000 73 5 0.9205680 214 6 0.9000000 54 6 0.7657407 108 6 0.927075 120 5 0.916578 95 5 0.8952887 60 5 0.8975709 115 6 0.8330952 107 5 0.969697 48 5 0.805392 67 5 0.9805556 105 5 0.8380342 114 6 0.895071 267 6 0.9262108 96 6 0.905556 65 4 1.0000000 8 1 0.7600000 21 2 0.873896 79 6 0.92585209 121 6 0.8382179 174 5 0.9460642 222 5 0.9386036 229 5 0.7734259 177 5 0.902559 275 5 0.8889039 0.836732 0.5514124 0.9465345 0.8336614 0.944094 0.817276 0.9219245 0.878819 0.947132 0.918607 0.960630 0.9275450 0.86610 0.850905 0.937162 0.9053436 0.8922686 0.899606 0.9413744 0.921785 0.8046369 0.932416 0.943607 0.8795610 0.9078138 0.8296560 0.972799 0.894141 0.9770341 0.8633152 0.893032 0.9649640 0.9656168 NA 0.8028871 0.878394 0.9101298 0.8771857 0.9290545 0.9181916 0.9048950 0.879022 4 0.894714 0.892063 5.5690e-05 6 0.889033 0.8851836 0.00384942 0.54516058 0.60762092 insignificant 1.00000 1.000000 insignificant 0.5954745 0.56362109 insignificant 1 1.00000 insignificant -0.0071325 0.7849483 lowCoverage 1.00000 lowCoverage 0.894714 0.9153846 -0.0244290 6 0.889033 0.9094039 -0.02037094 8.6631e-01 0.2041842 insignificant 1.0000e+00 1.00000 insignificant 8.2443e-01 0.134056 insignificant 1.0000e+00 1 insignificant -0.02037657 5.9808e-01 lowCoverage 1.0000e+00 lowCoverage 0.894714 0.902507 -0.00487086 5 0.8890330 0.862990 0.0260431 1.3439e-01 2.4230e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.6179e-01 3.9805e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00156498 9.6784e-01 lowCoverage 1.0000000 lowCoverage 0.892063 0.9153846 -2.2386e-02 6 0.885184 0.9094039 -0.02422036 9.2277e-01 0.158108 insignificant 1.0000e+00 1 insignificant 9.1124e-01 0.289983 insignificant 1.0000e+00 1 insignificant -0.0132441 7.3185e-01 lowCoverage 1.0000e+00 lowCoverage 0.892063 0.9025070 -0.00294867 5 0.8851836 0.8629898 0.02219372 5.1383e-01 2.8354e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.9944e-01 3.9448e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0055675 8.8658e-01 insignificant 1.0000000 insignificant 0.9153846 0.9025070 0.0095534 5 0.9094039 0.8629898 0.04641408 1.9248e-01 7.1656e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.3071351 8.7365e-01 insignificant 1.00000 1.0000e+00 insignificant 0.0188116 6.9294e-01 lowCoverage 1.0000e+00 lowCoverage chr7 4851335 4852335 25576 ENSG00000206895 0.498885 349 6 0.5878525 177 6 0.6261687 141 6 0.4647867 337 6 0.6050977 76 6 0.461188 353 6 0.570244 159 6 0.6140179 134 6 0.577246 160 6 0.401339 154 6 0.6369284 149 6 0.529575 120 6 0.5641202 156 6 NA 0 0 0.755484 146 6 0.456309 89 6 0.350266 168 6 0.4378927 456 6 0.596349 106 6 0.6560595 269 6 0.2939870 84 6 0.3117604 279 6 0.514771 261 6 0.432345 73 6 0.4960155 150 6 0.5643087 237 6 0.6185268 117 6 0.515806 68 5 0.462569 102 6 0.3231741 251 6 0.5554203 175 6 0.741956 299 6 0.2696241 200 6 0.040709 178 6 NA 0 0 0.2363946 80 6 0.438039 68 6 0.30153032 310 6 0.3194924 464 6 0.2381352 436 6 0.1854831 368 6 0.2203702 302 6 0.214767 502 6 0.5031669 0.606562 0.6230175 0.4713515 0.6364551 0.395266 0.591184 0.5619040 0.573452 0.474009 0.630509 0.506342 0.5744498 NA 0.757022 0.450233 0.3643845 0.3503874 0.585943 0.5976910 0.376325 0.1921635 0.443103 0.473301 0.4918329 0.5705611 0.5691600 0.451424 0.479545 0.3173291 0.5505461 0.716731 0.2599981 0.0418957 NA 0.2612549 0.531329 0.2698544 0.3074081 0.2272439 0.1762202 0.2126521 0.206689 6 0.497702 0.457538 3.9722e-02 6 0.549974 0.4822404 0.06773396 0.09855679 0.99506074 insignificant 1.00000 1.000000 insignificant 0.0398761 0.99658742 weaklyHypermeth 1 1.00000 insignificant 0.0609454 0.1878603 insignificant 1.00000 insignificant 0.497702 0.2428230 0.2532263 6 0.549974 0.2199572 0.33001717 9.2141e-15 0.9999989 hypermethylated 2.0031e-13 1.00000 hypermethylated 4.5762e-08 1.000000 hypermethylated 1.4762e-06 1 hypermethylated 0.28957278 7.8004e-03 weaklyHypermeth 1.5001e-01 insignificant 0.496610 0.234073 0.26585649 6 0.5027479 0.238489 0.2642591 4.5338e-18 1.0000e+00 hypermethylated 5.0376e-16 1.0000e+00 hypermethylated 5.8706e-15 1.0000e+00 hypermethylated 2.1427e-12 1.0000e+00 hypermethylated 0.31118257 2.1540e-07 hypermethylated 0.0001497 hypermethylated 0.457538 0.2428230 2.1436e-01 6 0.482240 0.2199572 0.26228321 1.5799e-06 0.999846 hypermethylated 2.2897e-05 1 hypermethylated 4.0453e-05 0.999960 hypermethylated 8.2557e-04 1 hypermethylated 0.2286273 1.8123e-02 weaklyHypermeth 2.5891e-01 insignificant 0.456855 0.2340734 0.22685357 6 0.4626138 0.2384887 0.22412508 8.4065e-08 1.0000e+00 hypermethylated 6.4665e-06 1.0000e+00 hypermethylated 2.0416e-08 1.0000e+00 hypermethylated 4.0831e-06 1.0000000 hypermethylated 0.2502371 4.7680e-05 hypermethylated 0.0158932 hypermethylated 0.2442840 0.2340734 0.0128331 6 0.2566167 0.2384887 0.01812800 5.7049e-01 2.2216e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.3652676 3.0024e-01 insignificant 1.00000 1.0000e+00 insignificant 0.0216098 7.6337e-01 insignificant 1.0000e+00 insignificant chr7 5089435 5090435 25579 RBAK ENSG00000146587 0.927566 651 12 0.8546040 474 12 0.9114151 367 12 0.9547409 502 10 0.8828050 194 12 0.892641 736 12 0.898352 237 12 0.9135536 395 12 0.898174 370 12 0.936316 250 12 0.8930511 486 12 0.826098 98 9 0.9429729 456 12 1.00000 44 2 0.949610 302 12 0.870370 38 6 0.860691 67 7 0.9175476 661 12 0.926437 308 12 0.7748722 592 12 0.8917581 97 12 0.9189103 215 9 0.901089 403 12 0.885684 206 12 0.9273088 149 9 0.9750588 508 12 0.9010830 217 12 0.892266 168 9 0.902703 519 12 0.9716915 550 12 0.9559458 460 11 0.940954 652 11 0.8248312 541 12 0.795326 321 12 0.8518398 268 6 0.8214286 74 10 0.824842 200 12 0.86605177 524 11 0.8252365 629 12 0.9524249 805 12 0.8938476 575 12 0.9628007 639 12 0.900814 604 12 0.9338641 0.847632 0.9276594 0.9509305 0.8847172 0.906612 0.887949 0.8924353 0.888708 0.925657 0.916872 0.798178 0.9493381 0.97917 0.948325 0.923130 0.9016320 0.9262146 0.943539 0.9204927 0.870540 0.9013327 0.917836 0.898902 0.9447029 0.9725680 0.8759009 0.905173 0.897315 0.9614487 0.9585174 0.937703 0.8510092 0.7910916 0.80581559 0.8582090 0.839043 0.8607416 0.9492289 0.9564720 0.9165691 0.9591117 0.934875 6 0.914060 0.929435 -1.3804e-02 12 0.911592 0.9308008 -0.01920927 0.99661151 0.00698156 weaklyHypometh 1.00000 0.436347 insignificant 0.9437186 0.06916836 insignificant 1 1.00000 insignificant -0.0204468 0.1662805 insignificant 1.00000 insignificant 0.914060 0.8293568 0.0861271 12 0.911592 0.8342923 0.07729921 1.2034e-08 0.9994944 weaklyHypermeth 2.1113e-07 1.00000 weaklyHypermeth 4.1292e-04 0.999906 weaklyHypermeth 7.3736e-03 1 weaklyHypermeth 0.07087100 1.8808e-04 weaklyHypermeth 5.8774e-03 weaklyHypermeth 0.913807 0.944787 -0.03129530 12 0.7813641 0.811812 -0.0304478 1.0000e+00 1.4713e-03 weaklyHypometh 1.0000e+00 9.8083e-02 weaklyHypometh 9.9965e-01 7.6769e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00543382 8.4718e-01 insignificant 1.0000000 insignificant 0.929435 0.8293568 1.0002e-01 12 0.930801 0.8342923 0.09650848 3.6909e-09 0.999991 weaklyHypermeth 7.5324e-08 1 weaklyHypermeth 5.4079e-05 0.999772 weaklyHypermeth 1.0816e-03 1 weaklyHypermeth 0.0913178 1.7779e-05 weaklyHypermeth 7.7299e-04 weaklyHypermeth 0.929537 0.9455049 -0.01551875 12 0.9446406 0.9132467 0.03139387 9.9676e-01 1.4671e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3991e-01 2.4790e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0150130 5.9122e-01 insignificant 1.0000000 insignificant 0.8293568 0.9459543 -0.1142548 12 0.8342923 0.9471140 -0.11282169 1.0000e+00 7.3943e-07 weaklyHypometh 1.0000e+00 1.9268e-05 weaklyHypometh 0.9999996 7.8571e-05 weaklyHypometh 1.00000 2.7093e-03 weaklyHypometh -0.0763048 3.2307e-02 weaklyHypometh 4.2272e-01 insignificant chr7 5246835 5247835 25580 WIPI2 ENSG00000157954 0.322282 295 5 0.1094771 116 3 0.0888889 109 3 0.3782834 265 5 0.1498824 120 5 0.291372 403 3 0.113196 191 3 0.1280373 125 3 0.065833 157 3 0.099573 97 4 0.3378424 170 4 0.112308 54 3 0.0984848 104 3 0.11087 87 3 0.110597 135 3 0.062500 64 3 NA 0 0 0.1653767 620 5 0.111388 218 3 0.2275404 258 5 0.2254902 92 3 0.1428571 35 3 0.300620 104 3 0.057576 106 5 0.2142857 177 4 0.0548780 190 3 0.2016582 259 4 0.025641 70 3 0.064583 197 3 0.2362637 233 3 0.2215238 210 5 0.134588 237 3 0.0472973 125 3 0.203448 206 5 0.2380952 119 5 0.2000000 30 3 0.096599 103 5 0.12045455 211 5 0.0580378 272 5 0.1349838 286 5 0.2459459 255 4 0.1757454 225 5 0.195757 260 5 0.1741406 0.064924 0.1748148 0.1646383 0.1812086 0.240526 0.122173 0.2099048 0.151275 0.163248 0.186952 0.183795 0.0432323 0.14547 0.116763 0.123333 NA 0.1060779 0.182093 0.2092475 0.120904 0.1457778 0.194349 0.138990 0.0507937 0.1082927 0.1350066 0.050598 0.106204 0.0639316 0.1529303 0.220703 0.1244444 0.1834483 0.34666667 0.2005175 0.156614 0.1225253 0.1313871 0.1415115 0.0560000 0.1376309 0.079503 3 0.152731 0.120545 2.5067e-02 3 0.372149 0.1503579 0.22179143 0.59740327 1.00000000 lowCoverage 1.00000 1.000000 lowCoverage 0.3958021 1.00000000 lowCoverage 1 1.00000 lowCoverage 0.0056379 0.8705662 lowCoverage 1.00000 lowCoverage 0.151718 0.2304786 -0.0514236 3 0.213761 0.1356242 0.07813707 3.2662e-03 0.8596818 lowCoverage 3.1405e-02 1.00000 lowCoverage 5.4628e-02 0.951964 lowCoverage 5.2692e-01 1 lowCoverage 0.01131930 7.6944e-01 lowCoverage 1.0000e+00 lowCoverage 0.152879 0.125578 0.04433321 3 0.3508409 0.169923 0.1809182 6.9391e-01 8.1391e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 2.7324e-01 8.6568e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.00020765 9.9585e-01 lowCoverage 1.0000000 lowCoverage 0.119427 0.2304786 -7.5019e-02 3 0.113126 0.1356242 -0.02249794 6.9186e-01 0.654827 lowCoverage 1.0000e+00 1 lowCoverage 6.9887e-01 0.838309 lowCoverage 1.0000e+00 1 lowCoverage 0.0056814 8.8865e-01 lowCoverage 1.0000e+00 lowCoverage 0.120989 0.1255778 0.01786936 3 0.1754175 0.1699226 0.00549488 9.4100e-01 7.9782e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.9381e-01 8.9632e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage -0.0054302 8.9677e-01 lowCoverage 1.0000000 lowCoverage 0.2307692 0.1252918 0.0964211 5 0.1549991 0.1008198 0.05417936 6.3169e-01 3.0277e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.6727752 4.4706e-01 insignificant 1.00000 1.0000e+00 insignificant -0.0111116 8.0508e-01 lowCoverage 1.0000e+00 lowCoverage chr7 5413735 5414735 25582 TNRC18 ENSG00000182095 0.613262 268 9 0.4749018 308 9 0.4129973 165 8 0.5719697 132 5 0.5520848 178 8 0.533408 405 11 0.478240 274 8 0.4981581 209 8 0.528060 158 8 0.572297 127 8 0.4690192 306 9 0.467921 120 7 0.5862072 140 8 0.49152 122 8 0.462037 153 8 0.587037 105 4 0.703580 322 4 0.5357774 187 9 0.440091 305 8 0.5963976 358 9 0.3371212 50 3 0.8000000 11 1 0.427107 148 9 0.400428 117 4 0.4508282 49 2 0.5581180 368 9 0.4653702 171 6 0.515661 58 3 0.589402 198 9 0.6066432 247 9 0.6696739 272 9 0.558791 366 9 0.5111656 247 11 0.543262 195 7 0.6350694 282 9 0.4812500 35 3 0.418551 134 11 0.59111051 404 9 0.5369522 259 10 0.7105333 344 9 0.5675157 210 8 0.6577959 150 5 0.604467 282 8 0.5224778 0.305092 0.3170729 0.5005319 0.4734469 0.606760 0.330853 0.4533435 0.368161 0.508087 0.407381 0.280347 0.3597670 0.57272 0.529622 0.391463 0.4283425 0.5220434 0.259009 0.5083475 0.558607 0.5793364 0.429004 0.334097 0.4999150 0.7427058 0.4900804 0.706018 0.446316 0.6734834 0.6443569 0.463796 0.6732027 0.7088978 0.69031915 0.4197922 0.629971 0.6780576 0.5244064 0.5958938 0.4971397 0.5622224 0.452606 4 0.454399 0.558264 -1.0526e-01 9 0.562313 0.4391822 0.12313093 0.78638624 0.06122595 insignificant 1.00000 1.000000 insignificant 0.7336250 0.40793546 insignificant 1 1.00000 insignificant -0.0028471 0.9442072 insignificant 1.00000 insignificant 0.453915 0.6453354 -0.2140435 9 0.523383 0.4872334 0.03614932 2.7838e-01 0.0025221 weaklyHypometh 1.0000e+00 0.50442 insignificant 3.1975e-01 0.213856 insignificant 1.0000e+00 1 insignificant -0.00131982 9.7119e-01 insignificant 1.0000e+00 insignificant 0.453324 0.586013 -0.09982243 8 0.4947259 0.605693 -0.1109667 9.9990e-01 3.1983e-04 weaklyHypometh 1.0000e+00 2.9075e-02 weaklyHypometh 9.9997e-01 8.4006e-03 weaklyHypometh 1.0000e+00 4.9415e-01 insignificant -0.08670468 4.6175e-02 weaklyHypometh 0.9619688 insignificant 0.559902 0.6453354 -9.8450e-02 9 0.536778 0.4872334 0.04954485 5.7066e-01 0.554502 insignificant 1.0000e+00 1 insignificant 5.9653e-01 0.827920 insignificant 1.0000e+00 1 insignificant 0.0015272 9.7531e-01 insignificant 1.0000e+00 insignificant 0.560117 0.5863454 0.00811334 8 0.5257505 0.6303369 -0.10458635 9.5611e-01 6.5555e-03 inconclusive 1.0000e+00 5.0427e-01 insignificant 9.8595e-01 6.3032e-02 insignificant 1.0000e+00 1.0000000 insignificant -0.0838576 1.0479e-01 insignificant 1.0000000 insignificant 0.6460587 0.5860129 0.1267861 8 0.5180134 0.6056927 -0.08767925 2.7841e-01 6.5174e-04 inconclusive 1.0000e+00 8.8073e-03 inconclusive 0.6569994 5.1320e-02 insignificant 1.00000 5.2908e-01 insignificant -0.0853849 8.7108e-02 insignificant 9.3665e-01 insignificant chr7 5458435 5459435 25583 TNRC18 ENSG00000182095 0.891636 221 6 0.8418515 223 6 0.7589738 206 6 0.8487923 95 6 0.8737374 82 6 0.857651 289 6 0.940185 121 6 0.8548164 180 6 0.878624 187 6 0.893371 125 6 0.9072823 294 6 0.938272 82 5 0.8568855 232 6 NA 0 0 0.844935 213 6 0.734880 55 5 0.927315 51 3 0.8192641 120 6 0.882697 222 6 0.9323644 225 6 0.8733854 129 6 0.6928571 36 3 0.918061 208 6 0.867455 103 6 0.8854701 48 6 0.9085981 296 6 0.8783888 157 6 0.757937 63 4 0.843230 226 6 0.9092191 311 6 0.8604348 257 6 0.921227 328 6 0.1829566 290 6 0.176694 229 6 0.6333333 23 2 0.6610517 58 5 0.358209 81 6 0.81631764 325 6 0.8260317 118 4 0.7780129 247 6 0.6699634 109 6 0.7384016 134 6 0.871809 100 4 0.9059149 0.854381 0.7896284 0.8697322 0.8938022 0.883164 0.924628 0.8571044 0.879276 0.897213 0.913903 0.958086 0.8465208 NA 0.869931 0.691251 0.8958962 0.8260221 0.893229 0.9227774 0.912373 0.7936508 0.934484 0.894962 0.8784689 0.9235812 0.8946128 0.858466 0.849660 0.9208394 0.8660331 0.924974 0.1487111 0.1261465 0.71068806 0.6724551 0.287938 0.8212454 0.8268234 0.7721200 0.6757910 0.7424831 0.814348 3 0.879305 0.907493 -2.5313e-02 6 0.870840 0.8903423 -0.01950197 0.98088309 0.04251711 weaklyHypometh 1.00000 1.000000 insignificant 0.8883474 0.20118645 insignificant 1 1.00000 insignificant 0.0078659 0.7414322 insignificant 1.00000 insignificant 0.879305 0.4304175 0.4520045 6 0.870840 0.4244118 0.44642859 1.0276e-26 1.0000000 hypermethylated 3.3149e-25 1.00000 hypermethylated 7.7808e-08 1.000000 hypermethylated 2.4315e-06 1 hypermethylated 0.39612747 1.5304e-02 weaklyHypermeth 2.5507e-01 insignificant 0.879305 0.793785 0.09008164 6 0.8708404 0.773604 0.0972364 5.6100e-08 9.9309e-01 weaklyHypermeth 3.5062e-06 1.0000e+00 weaklyHypermeth 1.0353e-03 9.3934e-01 weaklyHypermeth 5.4491e-02 1.0000e+00 weaklyHypermeth 0.09071078 5.7346e-02 insignificant 1.0000000 insignificant 0.907493 0.4304175 4.7529e-01 6 0.890342 0.4244118 0.46593055 5.2382e-19 1.000000 hypermethylated 1.5873e-17 1 hypermethylated 7.0498e-07 1.000000 hypermethylated 2.2741e-05 1 hypermethylated 0.3882616 1.6135e-02 weaklyHypermeth 2.3728e-01 insignificant 0.907493 0.7937853 0.11492358 6 0.8903423 0.7736040 0.11673834 5.7179e-09 9.9932e-01 weaklyHypermeth 5.1428e-07 1.0000e+00 weaklyHypermeth 5.3086e-04 9.8126e-01 weaklyHypermeth 3.1227e-02 1.0000000 weaklyHypermeth 0.0828449 7.9317e-02 insignificant 1.0000000 insignificant 0.4304175 0.7937853 -0.3643131 6 0.4244118 0.7736040 -0.34919222 1.0000e+00 5.5551e-06 hypomethylated 1.0000e+00 1.2345e-04 hypomethylated 0.9999888 1.3257e-03 weaklyHypometh 1.00000 2.6513e-02 weaklyHypometh -0.3054167 3.8508e-02 weaklyHypometh 4.8744e-01 insignificant chr7 5503335 5504335 25585 MIR589 ENSG00000207973 0.825685 82 6 0.7943638 136 6 0.4938035 152 6 0.7917391 83 3 0.6937937 56 5 0.836846 156 6 0.590426 74 5 0.7878601 119 6 0.700347 149 6 0.831330 114 6 0.7049566 227 6 0.355725 105 6 0.8160256 175 6 0.76970 31 3 0.830833 78 6 0.367063 53 5 0.285883 84 6 0.5369048 98 4 0.887521 157 6 0.7640640 159 6 0.8662587 90 6 0.6220000 88 4 0.672247 122 6 0.921832 103 6 0.8676471 54 3 0.8193438 193 6 0.8847763 117 6 0.847619 42 4 0.857072 120 6 0.7820881 95 6 0.8113999 169 6 0.900542 217 6 0.5594323 183 6 0.786002 155 6 1.0000000 135 5 0.2944444 20 1 0.717729 60 3 0.66394814 124 6 0.7796365 94 5 0.6906309 113 6 0.4572935 75 4 0.3309139 87 5 0.612959 104 6 0.8338466 0.788562 0.6324968 0.8197358 0.7801718 0.818941 0.670791 0.7833203 0.664203 0.879508 0.846458 0.457833 0.8086129 0.73765 0.793686 0.505633 0.3330625 0.7169796 0.881511 0.7871191 0.933034 0.5724801 0.726430 0.913003 0.7859188 0.7971614 0.8880223 0.709714 0.824112 0.8866271 0.7935429 0.889990 0.6210305 0.8466085 0.99768400 0.2548269 0.812297 0.6041011 0.8165990 0.7338089 0.4699491 0.2969163 0.751846 3 0.728147 0.824823 -9.6933e-02 6 0.620217 0.8302418 -0.21002477 0.99991145 0.00035855 weaklyHypometh 1.00000 0.089274 weaklyHypometh 0.9999996 0.00002900 weaklyHypometh 1 0.02900 weaklyHypometh -0.1378254 0.0078845 weaklyHypometh 1.00000 insignificant 0.728147 0.7282127 -0.0049206 6 0.620217 0.6199002 0.00031676 6.9206e-01 0.3954123 insignificant 1.0000e+00 1.00000 insignificant 8.5992e-01 0.420067 insignificant 1.0000e+00 1 insignificant 0.01298415 9.0465e-01 lowCoverage 1.0000e+00 lowCoverage 0.728784 0.632135 0.12031144 5 0.7235865 0.596690 0.1268960 3.0536e-03 9.9746e-01 weaklyHypermeth 9.8504e-02 1.0000e+00 weaklyHypermeth 2.4942e-02 9.7188e-01 weaklyHypermeth 7.2694e-01 1.0000e+00 insignificant 0.10895678 2.7167e-01 insignificant 1.0000000 insignificant 0.824823 0.7282127 9.4164e-02 6 0.830242 0.6199002 0.21034153 2.8811e-03 0.968765 weaklyHypermeth 2.9102e-02 1 weaklyHypermeth 1.9909e-02 0.994265 weaklyHypermeth 2.1878e-01 1 insignificant 0.1508095 1.8338e-01 lowCoverage 1.0000e+00 lowCoverage 0.824786 0.6321353 0.19188184 5 0.8297265 0.5966905 0.23303604 1.9267e-07 1.0000e+00 weaklyHypermeth 1.2845e-05 1.0000e+00 weaklyHypermeth 1.9564e-05 9.9999e-01 weaklyHypermeth 1.7786e-03 1.0000000 weaklyHypermeth 0.2467822 3.4487e-02 weaklyHypermeth 1.0000000 insignificant 0.7292899 0.6321353 0.1062260 5 0.7232169 0.5966905 0.12652648 8.9701e-03 9.3323e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.0391026 9.3175e-01 weaklyHypermeth 1.00000 1.0000e+00 insignificant 0.0959726 4.6437e-01 lowCoverage 1.0000e+00 lowCoverage chr7 5555035 5556035 25586 ACTB ENSG00000075624 0.749586 188 6 0.5685626 234 6 0.4540139 222 6 0.7470764 280 6 0.6057491 90 4 0.710000 370 6 0.636239 152 6 0.6636607 202 6 0.555765 229 6 0.737522 145 6 0.7484858 252 6 0.326742 142 6 0.3904085 261 6 0.59429 32 2 0.632226 174 6 0.706439 50 4 0.382566 112 5 0.5297270 282 6 0.622055 161 6 0.6315291 220 6 0.7297591 77 6 0.5217262 133 6 0.676030 207 6 0.778439 91 6 0.6604701 72 5 0.6486841 277 6 0.6198587 154 6 0.575824 51 4 0.502039 222 6 0.4985538 324 6 0.6037268 258 6 0.795041 277 6 0.0664927 248 6 0.036389 151 6 0.0101695 140 5 0.0000000 49 4 0.018710 112 6 0.00757576 257 6 0.5943465 202 6 0.5944441 249 6 0.6398706 194 6 0.4198682 199 6 0.605070 211 6 0.7713405 0.601816 0.5038178 0.7405202 0.6773539 0.747819 0.687497 0.6526956 0.610804 0.732271 0.768128 0.384944 0.4356315 0.61128 0.670165 0.709365 0.3794816 0.5253205 0.681886 0.6715254 0.701952 0.5646008 0.694493 0.820279 0.7181194 0.6782169 0.6326069 0.561777 0.580387 0.5463843 0.6575474 0.803421 0.0991960 0.0533926 0.01327945 0.0000000 0.035853 0.0175908 0.5825382 0.6236888 0.6479958 0.4510275 0.633872 4 0.628752 0.652823 -2.8979e-02 6 0.601547 0.6284068 -0.02685971 0.95619797 0.22351413 insignificant 1.00000 1.000000 insignificant 0.9333531 0.29823188 insignificant 1 1.00000 insignificant -0.0345475 0.4043624 insignificant 1.00000 insignificant 0.628752 0.0417973 0.5806174 6 0.601547 0.0315614 0.56998574 5.7286e-40 1.0000000 hypermethylated 3.0150e-38 1.00000 hypermethylated 1.1146e-16 1.000000 hypermethylated 9.2881e-15 1 hypermethylated 0.57640908 2.0492e-15 hypermethylated 2.9274e-13 hypermethylated 0.628752 0.606635 0.02004148 6 0.6015471 0.576671 0.0248764 2.8660e-01 6.6421e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.6891e-01 7.9878e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02891205 5.6239e-01 insignificant 1.0000000 insignificant 0.652823 0.0417973 6.0864e-01 6 0.628407 0.0315614 0.59684545 2.6545e-41 1.000000 hypermethylated 2.2121e-39 1 hypermethylated 2.0958e-14 1.000000 hypermethylated 1.7465e-12 1 hypermethylated 0.6109566 2.6119e-11 hypermethylated 3.2648e-09 hypermethylated 0.652823 0.6066351 0.05249458 6 0.6284068 0.5766707 0.05173614 3.3583e-02 9.0597e-01 weaklyHypermeth 7.4309e-01 1.0000e+00 insignificant 6.2875e-02 9.4175e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0634596 2.2250e-01 insignificant 1.0000000 insignificant 0.0417973 0.6066351 -0.5423805 6 0.0315614 0.5766707 -0.54510931 1.0000e+00 1.7192e-28 hypomethylated 1.0000e+00 1.9102e-26 hypomethylated 1.0000000 9.8566e-10 hypomethylated 1.00000 7.5820e-08 hypomethylated -0.5474970 7.1918e-05 hypomethylated 5.9932e-03 hypomethylated chr7 5555135 5556135 25587 ACTB ENSG00000075624 0.661423 387 11 0.5243607 314 12 0.4022730 330 12 0.6770052 378 11 0.5593561 175 9 0.625589 544 11 0.569617 247 12 0.5685351 279 12 0.545460 318 11 0.617377 230 11 0.6514459 415 12 0.418662 236 11 0.4521846 356 11 0.54714 35 2 0.586249 256 11 0.592401 88 8 0.433076 172 10 0.5787359 398 11 0.570654 287 11 0.6117070 364 11 0.6346896 109 11 0.6239719 159 10 0.576309 303 11 0.671082 118 7 0.6456099 100 9 0.5257035 390 11 0.6830808 193 10 0.572634 73 5 0.513378 289 11 0.5241498 451 11 0.6016683 409 12 0.683584 519 11 0.2619501 329 11 0.306435 228 11 0.2922488 197 11 0.2424242 77 8 0.236379 173 11 0.30142849 385 12 0.6067364 324 11 0.6241057 440 12 0.6150333 354 11 0.4751578 338 11 0.631677 307 11 0.7027090 0.563946 0.4637788 0.6938290 0.6134912 0.693618 0.637915 0.6047672 0.601515 0.671765 0.708851 0.404561 0.4743156 0.59733 0.640765 0.638188 0.3909586 0.5447055 0.644723 0.6573566 0.655569 0.6261683 0.626227 0.762532 0.7017600 0.6340135 0.6764091 0.556003 0.577948 0.5492536 0.6321066 0.722697 0.1981878 0.1922049 0.15404565 0.1706871 0.188075 0.1835071 0.5824529 0.6250834 0.6209571 0.4891580 0.632030 6 0.582544 0.620302 -2.6974e-02 11 0.563245 0.5953746 -0.03212971 0.99642035 0.14824557 insignificant 1.00000 1.000000 insignificant 0.9951754 0.03158839 weaklyHypometh 1 1.00000 insignificant -0.0449924 0.0855469 insignificant 1.00000 insignificant 0.582544 0.1936645 0.3924971 11 0.563245 0.2885425 0.27470238 4.4576e-36 0.6975250 hypermethylated 2.0262e-34 1.00000 hypermethylated 1.2299e-13 0.907434 hypermethylated 6.8330e-12 1 hypermethylated 0.28618523 6.5089e-12 hypermethylated 5.9172e-10 hypermethylated 0.582544 0.581395 -0.01013249 11 0.5632449 0.601520 -0.0382748 8.3369e-01 5.2839e-03 weaklyHypometh 1.0000e+00 2.2973e-01 insignificant 8.6768e-01 2.3705e-02 weaklyHypometh 1.0000e+00 8.7797e-01 insignificant -0.03087936 3.9423e-01 insignificant 1.0000000 insignificant 0.620302 0.1936645 4.2452e-01 11 0.595375 0.2885425 0.30683208 1.2516e-37 0.989258 hypermethylated 8.3438e-36 1 hypermethylated 2.1787e-12 0.999895 hypermethylated 1.2816e-10 1 hypermethylated 0.3311776 6.8311e-11 hypermethylated 7.5901e-09 hypermethylated 0.620302 0.5813953 0.02236537 11 0.5953746 0.6015196 -0.00614506 3.0157e-01 2.4566e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.6670e-01 5.6274e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0141130 6.9218e-01 insignificant 1.0000000 insignificant 0.1936645 0.5813953 -0.3968312 11 0.2885425 0.6015196 -0.31297715 9.9902e-01 5.6306e-27 hypomethylated 1.0000e+00 5.1187e-25 hypomethylated 0.9999654 1.3169e-09 hypomethylated 1.00000 9.4065e-08 hypomethylated -0.3170646 1.0286e-04 hypomethylated 7.9122e-03 hypomethylated chr7 5584835 5585835 25588 ENSG00000169549 0.957267 175 6 0.8555246 146 5 0.9074144 102 5 0.9771286 180 6 0.9583333 36 5 0.846155 277 6 0.909722 66 6 0.9452183 97 6 0.874429 112 6 0.921942 79 6 0.9328325 162 6 0.933598 60 5 0.9502996 84 6 0.96667 16 1 0.832411 90 5 0.902778 22 1 0.825731 59 4 0.9514652 214 5 0.927679 75 5 0.9744311 197 6 0.8702948 45 4 0.9174383 79 5 0.811462 92 6 0.990385 69 5 0.9888889 50 5 0.9589707 123 6 0.9613290 55 4 0.805556 52 4 0.839420 61 4 0.8943506 137 6 0.9137148 114 6 0.931454 317 6 0.9321405 128 6 0.947601 57 3 0.6237605 175 6 1.0000000 15 2 0.937607 107 6 0.79613095 95 6 0.9367764 169 5 0.9343550 153 5 0.8703234 142 5 0.9090298 158 5 0.950514 178 5 0.9555505 0.826730 0.9282044 0.9720344 0.9665354 0.871483 0.917159 0.9466582 0.876436 0.926562 0.946623 0.922072 0.9606492 0.94229 0.932942 0.923885 0.8286853 0.9466961 0.936048 0.9673074 0.843520 0.8957787 0.920494 0.981829 0.9842520 0.9551999 0.9508775 0.953631 0.976644 0.9515390 0.8997165 0.916339 0.9329051 0.9386384 0.51867776 1.0000000 0.941349 0.8741329 0.9316405 0.9267254 0.9913138 0.9139030 0.954368 3 0.927079 0.929589 -6.3341e-03 6 0.888710 0.8445958 0.04411427 0.69437458 0.53900909 insignificant 1.00000 1.000000 insignificant 0.9540704 0.24320740 insignificant 1 1.00000 insignificant 0.0106126 0.6259007 insignificant 1.00000 insignificant 0.927079 0.8024263 0.1253207 6 0.888710 0.8075452 0.08116486 2.0828e-03 0.8345931 weaklyHypermeth 2.1038e-02 1.00000 weaklyHypermeth 7.8102e-01 0.502712 insignificant 1.0000e+00 1 insignificant 0.04467797 4.7344e-01 lowCoverage 1.0000e+00 lowCoverage 0.927079 0.946250 -0.01812583 5 0.8887100 0.836593 0.0521170 8.6977e-01 1.4362e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.9174e-01 3.1359e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00264839 8.8429e-01 insignificant 1.0000000 insignificant 0.929589 0.8024263 1.2988e-01 6 0.844596 0.8075452 0.03705059 7.3327e-03 0.944698 weaklyHypermeth 6.8887e-02 1 weaklyHypermeth 3.3434e-01 0.827975 insignificant 1.0000e+00 1 insignificant 0.0340654 5.9009e-01 lowCoverage 1.0000e+00 lowCoverage 0.929589 0.9462500 -0.01258887 5 0.8445958 0.8365930 0.00800276 7.5819e-01 1.7662e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.8634e-01 7.2376e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0132610 5.7900e-01 insignificant 1.0000000 insignificant 0.8024263 0.9462500 -0.1678554 5 0.8075452 0.8365930 -0.02904783 9.9700e-01 1.0342e-02 weaklyHypometh 1.0000e+00 1.0465e-01 insignificant 0.8546708 4.7300e-01 insignificant 1.00000 1.0000e+00 insignificant -0.0473264 4.5299e-01 lowCoverage 1.0000e+00 lowCoverage chr7 5612535 5613535 25589 FSCN1 ENSG00000075618 0.918155 65 4 0.6628427 56 6 0.6961404 93 6 0.8725108 91 5 0.8216783 59 5 0.917759 203 7 0.762698 88 4 0.8756448 106 7 0.655551 141 5 0.842190 107 5 0.9312599 128 8 0.600000 49 4 0.9304153 80 5 0.94254 55 5 0.888095 77 5 0.863095 47 4 0.825397 37 4 0.7882640 89 4 0.805983 58 5 0.7266009 84 5 0.8287037 43 4 0.8118501 84 4 0.820677 84 5 0.723279 83 4 0.8554487 63 5 0.8245833 97 8 0.6778567 105 5 0.686271 81 4 0.808855 74 5 0.9461751 107 7 0.9316176 96 7 0.805004 147 7 0.9038084 75 4 0.944444 74 6 0.6666667 25 1 0.6833333 19 3 0.794776 100 6 0.90376984 99 8 0.9399671 69 4 0.9732143 70 5 0.9814815 51 4 0.8004535 37 4 0.850000 44 5 0.8965255 0.852185 0.8730671 0.8749320 0.8708327 0.899881 0.922296 0.9527478 0.882508 0.952646 0.959021 0.876744 0.8836035 0.94822 0.934828 0.943451 0.8113224 0.8511413 0.857682 0.8806418 0.900678 0.8447957 0.885276 0.918036 0.9185115 0.9125969 0.8675195 0.793498 0.910616 0.9301048 0.8358328 0.866733 0.8547500 1.0000000 0.95693979 0.7777512 0.908719 0.8581811 0.8845242 0.9501661 0.9741602 0.8779993 0.875000 4 0.875657 0.864662 1.3529e-02 5 0.843896 0.7636663 0.08022928 0.15093164 0.44457612 insignificant 1.00000 1.000000 insignificant 0.5018064 0.24664894 insignificant 1 1.00000 insignificant 0.0063143 0.8507809 insignificant 1.00000 insignificant 0.875660 0.8877551 -0.0156910 5 0.813731 0.9101941 -0.09646316 7.0571e-01 0.0632014 insignificant 1.0000e+00 1.00000 insignificant 8.7398e-01 0.167344 insignificant 1.0000e+00 1 insignificant 0.00020798 9.9704e-01 lowCoverage 1.0000e+00 lowCoverage 0.876914 0.918819 -0.02519695 4 0.8406534 0.934205 -0.0935514 9.6071e-01 2.8228e-02 lowCoverage 1.0000e+00 7.8412e-01 lowCoverage 9.9134e-01 6.9316e-03 lowCoverage 1.0000e+00 4.3323e-01 lowCoverage -0.09268224 6.2132e-02 lowCoverage 1.0000000 lowCoverage 0.867424 0.8877551 -1.8119e-02 5 0.809433 0.9101941 -0.10076123 7.8863e-01 0.268220 insignificant 1.0000e+00 1 insignificant 6.3274e-01 0.667289 insignificant 1.0000e+00 1 insignificant -0.0061063 9.1398e-01 lowCoverage 1.0000e+00 lowCoverage 0.872727 0.9188192 -0.04199158 4 0.8589658 0.9342048 -0.07523899 9.8162e-01 3.5774e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.8623e-01 3.0424e-02 lowCoverage 1.0000e+00 1.0000000 lowCoverage -0.0989965 5.1367e-02 lowCoverage 1.0000000 lowCoverage 0.8874680 0.9188192 -0.0252066 4 0.9002157 0.9342048 -0.03398913 7.3634e-01 3.9203e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.9841926 2.3638e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage -0.0928902 1.6180e-01 lowCoverage 1.0000e+00 lowCoverage chr7 5853235 5854235 25603 RNF216 ENSG00000011275 0.945879 185 8 NA 0 0 NA 0 0 0.9561404 147 8 NA 0 0 0.833333 10 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 0.7800478 565 8 NA 0 0 0.7065018 95 8 NA 0 0 NA 0 0 0.948622 123 8 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 0.993464 91 5 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 0.9527961 219 8 0.9561508 158 8 0.9377990 156 8 0.7800585 114 8 0.958799 223 8 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0.940644 0.962617 -2.4004e-02 0 0.947763 0.9580552 -0.01029181 0.83738083 0.11468345 noCoverage 1.00000 1.000000 noCoverage 0.9989828 0.40837560 noCoverage 1 1.00000 noCoverage -0.1266624 0.0624337 lowCoverage 1.00000 lowCoverage NA NA NA 0 NA NA NA 1.0000e+00 1.0000000 noCoverage 1.0000e+00 1.00000 noCoverage 1.0000e+00 1.000000 noCoverage 1.0000e+00 1 noCoverage NA 1.0000e+00 noCoverage 1.0000e+00 noCoverage 0.939759 0.940230 -0.00938416 5 0.9070576 0.921393 -0.0143358 6.6792e-01 6.7663e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.6275e-01 8.2608e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.07274018 2.5665e-01 lowCoverage 1.0000000 lowCoverage NA NA NA 0 NA NA NA 1.0000e+00 1.000000 noCoverage 1.0000e+00 1 noCoverage 1.0000e+00 1.000000 noCoverage 1.0000e+00 1 noCoverage NA 1.0000e+00 noCoverage 1.0000e+00 noCoverage 0.962617 0.9401611 0.02051509 0 0.9580552 0.9135327 0.04452248 2.0051e-01 8.9841e-01 noCoverage 1.0000e+00 1.0000e+00 noCoverage 3.0632e-01 9.9982e-01 noCoverage 1.0000e+00 1.0000000 noCoverage 0.0539223 2.4981e-01 lowCoverage 1.0000000 lowCoverage NA NA NA 0 NA NA NA 1.0000e+00 1.0000e+00 noCoverage 1.0000e+00 1.0000e+00 noCoverage 1.0000000 1.0000e+00 noCoverage 1.00000 1.0000e+00 noCoverage NA 1.0000e+00 noCoverage 1.0000e+00 noCoverage chr7 6021235 6022235 25605 AIMP2 ENSG00000106305 0.837333 414 11 0.6687265 296 11 0.7259458 147 11 0.8269191 319 11 0.8154409 119 11 0.841320 535 11 0.723710 148 9 0.6978863 214 9 0.658369 206 11 0.790649 180 11 0.8509173 392 11 0.682359 68 7 0.8428172 310 11 0.88005 90 7 0.805898 217 11 0.769872 75 5 0.850278 71 7 0.8298126 371 11 0.906060 330 10 0.7571794 414 11 0.7693118 108 9 0.7842448 155 8 0.854024 231 11 0.775580 117 9 0.8329687 115 7 0.7625829 397 11 0.8393939 167 9 0.921035 108 8 0.800435 252 10 0.6825620 445 11 0.8121952 399 11 0.825927 504 12 0.5585968 211 10 0.530326 216 11 0.5959051 186 9 0.6846813 100 7 0.644055 188 11 0.63672938 333 11 0.8797989 329 11 0.8640191 398 11 0.7522811 328 11 0.8769374 300 11 0.856738 358 11 0.8653991 0.845102 0.7927785 0.9233611 0.8717130 0.870419 0.819577 0.8395035 0.816563 0.846564 0.891522 0.782981 0.8882213 0.85486 0.831185 0.825587 0.8447259 0.8427067 0.943136 0.8511983 0.851745 0.8094893 0.879909 0.861095 0.8571778 0.8520040 0.8190208 0.893761 0.848841 0.8625610 0.8555563 0.874133 0.5541935 0.4874194 0.49971125 0.6017305 0.582866 0.5830700 0.9034874 0.8960269 0.8609304 0.8909099 0.871664 5 0.861066 0.864576 3.7761e-03 11 0.728629 0.7942351 -0.06560605 0.56992679 0.85760756 insignificant 1.00000 1.000000 insignificant 0.8148339 0.67256737 insignificant 1 1.00000 insignificant -0.0169446 0.4781583 insignificant 1.00000 insignificant 0.861241 0.5956240 0.2601255 11 0.784677 0.5993114 0.18536607 6.7690e-29 0.9733179 hypermethylated 2.4175e-27 1.00000 hypermethylated 7.1198e-07 0.969501 hypermethylated 1.6952e-05 1 hypermethylated 0.17969486 7.8921e-05 weaklyHypermeth 2.6307e-03 weaklyHypermeth 0.861066 0.869819 -0.02672985 11 0.7286290 0.787954 -0.0593247 9.8238e-01 9.2177e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9847e-01 4.2663e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.05787773 7.8889e-02 insignificant 1.0000000 insignificant 0.864486 0.5956240 2.5815e-01 11 0.778407 0.5993114 0.17909567 5.3267e-23 0.997823 hypermethylated 1.9024e-21 1 hypermethylated 1.7540e-06 0.997758 hypermethylated 5.1588e-05 1 hypermethylated 0.1966394 4.2837e-05 weaklyHypermeth 1.5866e-03 weaklyHypermeth 0.864576 0.8698190 -0.02974937 11 0.7942351 0.7879538 0.00628134 9.9507e-01 9.3703e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9938e-01 1.7433e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0409332 1.9709e-01 insignificant 1.0000000 insignificant 0.5956240 0.8697430 -0.2859722 11 0.5993114 0.7716425 -0.17233115 1.0000e+00 5.9766e-16 hypomethylated 1.0000e+00 3.3203e-14 hypomethylated 0.9999991 7.8979e-07 hypomethylated 1.00000 4.3877e-05 hypomethylated -0.2375726 6.1250e-05 hypomethylated 5.9932e-03 hypomethylated chr7 6031835 6032835 25607 ENSG00000207217 0.881387 784 15 0.9164013 545 19 0.8706573 478 18 0.9312856 711 16 0.9510218 226 14 0.804073 894 17 0.918285 309 10 0.9237920 334 17 0.870714 385 13 0.958158 345 16 0.9131271 578 18 0.961198 175 9 0.9076222 361 14 0.87365 110 9 0.893896 355 16 0.876163 123 8 0.928682 149 7 0.8251499 827 16 0.957592 358 17 0.9344408 620 17 0.9173935 166 12 0.8756309 192 13 0.843559 418 18 0.892295 185 11 0.9263404 296 12 0.9337798 586 18 0.8836404 240 16 0.896173 185 10 0.946156 335 15 0.8997622 661 18 0.8971258 607 18 0.920017 714 18 0.9584703 466 19 0.800855 342 17 0.7506380 453 18 0.9022700 99 7 0.723450 312 18 0.92998263 695 18 0.9236288 619 14 0.9133102 673 17 0.9166216 666 17 0.9196413 607 13 0.937964 692 16 0.9080792 0.898020 0.8435444 0.9225698 0.9190014 0.886909 0.908010 0.9197430 0.893531 0.956571 0.887513 0.934413 0.8803699 0.94772 0.909075 0.837749 0.9049119 0.9259854 0.936756 0.9217960 0.911532 0.8389342 0.922358 0.847486 0.9094162 0.9477107 0.8560607 0.932845 0.925039 0.9518296 0.8986107 0.923014 0.9203503 0.8225629 0.67196288 0.8600000 0.771322 0.8936991 0.9311717 0.9254187 0.9270561 0.9191838 0.937608 7 0.912773 0.915376 -3.8312e-03 17 0.851958 0.8604106 -0.00845292 0.68458558 0.06871723 insignificant 1.00000 1.000000 insignificant 0.3434017 0.06744757 insignificant 1 1.00000 insignificant 0.0022089 0.8618947 insignificant 1.00000 insignificant 0.912773 0.8445289 0.0705513 17 0.851958 0.8086610 0.04329672 1.7186e-03 0.3417081 weaklyHypermeth 1.7537e-02 1.00000 weaklyHypermeth 3.0256e-01 0.703106 insignificant 1.0000e+00 1 insignificant 0.06058742 1.9863e-01 insignificant 1.0000e+00 insignificant 0.912773 0.931839 -0.01643125 16 0.8519577 0.898744 -0.0467865 9.6380e-01 3.3474e-02 weaklyHypometh 1.0000e+00 8.5831e-01 insignificant 8.8240e-01 2.3688e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01736803 1.1256e-01 insignificant 1.0000000 insignificant 0.915376 0.8445289 7.6719e-02 18 0.860411 0.8086610 0.05174965 1.4039e-02 0.574609 weaklyHypermeth 1.2102e-01 1 insignificant 1.3453e-01 0.903958 insignificant 1.0000e+00 1 insignificant 0.0583785 2.1167e-01 insignificant 1.0000e+00 insignificant 0.915376 0.9318391 -0.01253159 16 0.8604106 0.8987442 -0.03833357 9.6166e-01 1.6467e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.3519e-01 5.0250e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0195770 5.0228e-02 insignificant 1.0000000 insignificant 0.8445289 0.9318391 -0.0937024 16 0.8086610 0.8987442 -0.09008321 9.9638e-01 9.9143e-02 insignificant 1.0000e+00 7.9315e-01 insignificant 0.9818630 4.6657e-01 insignificant 1.00000 1.0000e+00 insignificant -0.0779554 1.1193e-01 insignificant 1.0000e+00 insignificant chr7 6232735 6233735 25612 ENSG00000202273 0.749796 129 6 0.5820820 140 6 0.8024691 39 3 0.7952381 97 6 0.7124847 72 6 0.784550 99 6 0.560884 49 5 0.8697802 63 4 0.787393 56 6 0.805556 40 6 0.7397187 139 6 0.622024 23 2 0.7835344 63 6 0.82621 55 5 0.683523 51 3 0.316667 18 3 0.666667 3 0 0.6516449 155 5 0.842391 39 1 0.8151515 79 6 0.9212963 23 2 0.9166667 19 0 0.626263 59 3 0.718434 42 3 0.8551515 59 5 0.7214286 86 6 0.8182540 41 3 0.694444 16 0 0.855060 79 3 0.6956377 56 6 0.6583333 53 3 0.793651 62 6 0.7535340 101 6 0.761905 54 3 0.7180033 89 6 0.6000000 12 0 0.414986 68 3 0.82625812 95 6 0.7433604 102 6 0.8405483 91 5 0.5863967 116 5 0.7538462 38 2 0.640645 89 5 0.7483121 0.765629 0.7066993 0.7617647 0.7376966 0.939370 0.680532 0.8563914 0.773944 0.806373 0.755105 0.644958 0.7930308 0.85005 0.664572 0.523075 0.7340123 0.6734454 0.973146 0.8143048 0.921977 0.9264706 0.741459 0.716800 0.8352258 0.7280112 0.8112745 0.727941 0.861459 0.6922636 0.7991013 0.837418 0.7002584 0.7189542 0.70278638 0.6743195 0.498385 0.8310972 0.7602343 0.8414820 0.6347539 0.7467053 0.676457 0 0.763158 0.781513 -1.7192e-02 6 0.693887 0.6538273 0.04006016 0.73127300 0.45529698 insignificant 1.00000 1.000000 insignificant 0.9575193 0.53549395 insignificant 1 1.00000 insignificant -0.0529968 0.2061011 lowCoverage 1.00000 lowCoverage 0.763158 0.7231504 0.0439660 6 0.693887 0.6708517 0.02303574 2.9064e-02 0.4887533 weaklyHypermeth 2.4220e-01 1.00000 insignificant 1.3834e-01 0.726531 insignificant 1.0000e+00 1 insignificant 0.04077388 5.6376e-01 lowCoverage 1.0000e+00 lowCoverage 0.766234 0.759174 0.02903146 5 0.7626926 0.695091 0.0676013 6.7205e-02 9.0716e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.2241e-01 9.1359e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00692893 8.9988e-01 lowCoverage 1.0000000 lowCoverage 0.781513 0.7231504 5.8935e-02 6 0.653827 0.6708517 -0.01702442 7.3172e-02 0.998961 insignificant 5.4606e-01 1 insignificant 1.0743e-01 0.887717 insignificant 9.3420e-01 1 insignificant 0.0937707 2.0562e-01 lowCoverage 1.0000e+00 lowCoverage 0.785349 0.7591743 0.05418421 5 0.7862964 0.6950913 0.09120517 2.6543e-02 8.9743e-01 weaklyHypermeth 6.1728e-01 1.0000e+00 insignificant 1.0222e-01 9.7753e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0599257 2.9577e-01 lowCoverage 1.0000000 lowCoverage 0.7212714 0.7591743 -0.0254260 5 0.7146108 0.6950913 0.01951958 4.9029e-01 1.3741e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.7628078 2.7378e-01 insignificant 1.00000 1.0000e+00 insignificant -0.0338450 6.6561e-01 lowCoverage 1.0000e+00 lowCoverage chr7 6232835 6233835 25613 ENSG00000202273 0.749796 129 6 0.5820820 140 6 0.8024691 39 3 0.7952381 97 6 0.7124847 72 6 0.784550 99 6 0.560884 49 5 0.8697802 63 4 0.787393 56 6 0.805556 40 6 0.7397187 139 6 0.622024 23 2 0.7835344 63 6 0.82621 55 5 0.683523 51 3 0.316667 18 3 0.666667 3 0 0.6516449 155 5 0.842391 39 1 0.8151515 79 6 0.9212963 23 2 0.9166667 19 0 0.626263 59 3 0.718434 42 3 0.8551515 59 5 0.7214286 86 6 0.8182540 41 3 0.694444 16 0 0.855060 79 3 0.6956377 56 6 0.6583333 53 3 0.793651 62 6 0.7535340 101 6 0.761905 54 3 0.7180033 89 6 0.6000000 12 0 0.414986 68 3 0.82625812 95 6 0.7433604 102 6 0.8405483 91 5 0.5863967 116 5 0.7538462 38 2 0.640645 89 5 0.7483121 0.765629 0.7066993 0.7617647 0.7376966 0.939370 0.680532 0.8563914 0.773944 0.806373 0.755105 0.644958 0.7930308 0.85005 0.664572 0.523075 0.7340123 0.6734454 0.973146 0.8143048 0.921977 0.9264706 0.741459 0.716800 0.8352258 0.7280112 0.8112745 0.727941 0.861459 0.6922636 0.7991013 0.837418 0.7002584 0.7189542 0.70278638 0.6743195 0.498385 0.8310972 0.7602343 0.8414820 0.6347539 0.7467053 0.676457 0 0.763158 0.781513 -1.7192e-02 6 0.693887 0.6538273 0.04006016 0.73127300 0.45529698 insignificant 1.00000 1.000000 insignificant 0.9575193 0.53549395 insignificant 1 1.00000 insignificant -0.0529968 0.2061011 lowCoverage 1.00000 lowCoverage 0.763158 0.7231504 0.0439660 6 0.693887 0.6708517 0.02303574 2.9064e-02 0.4887533 weaklyHypermeth 2.4220e-01 1.00000 insignificant 1.3834e-01 0.726531 insignificant 1.0000e+00 1 insignificant 0.04077388 5.6376e-01 lowCoverage 1.0000e+00 lowCoverage 0.766234 0.759174 0.02903146 5 0.7626926 0.695091 0.0676013 6.7205e-02 9.0716e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.2241e-01 9.1359e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00692893 8.9988e-01 lowCoverage 1.0000000 lowCoverage 0.781513 0.7231504 5.8935e-02 6 0.653827 0.6708517 -0.01702442 7.3172e-02 0.998961 insignificant 5.4606e-01 1 insignificant 1.0743e-01 0.887717 insignificant 9.3420e-01 1 insignificant 0.0937707 2.0562e-01 lowCoverage 1.0000e+00 lowCoverage 0.785349 0.7591743 0.05418421 5 0.7862964 0.6950913 0.09120517 2.6543e-02 8.9743e-01 weaklyHypermeth 6.1728e-01 1.0000e+00 insignificant 1.0222e-01 9.7753e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0599257 2.9577e-01 lowCoverage 1.0000000 lowCoverage 0.7212714 0.7591743 -0.0254260 5 0.7146108 0.6950913 0.01951958 4.9029e-01 1.3741e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.7628078 2.7378e-01 insignificant 1.00000 1.0000e+00 insignificant -0.0338450 6.6561e-01 lowCoverage 1.0000e+00 lowCoverage chr7 6389435 6390435 25626 RAC1 ENSG00000136238 0.766455 176 5 0.6362821 118 5 0.6465721 141 5 0.8245865 91 5 0.5925649 51 5 0.738275 282 5 0.698429 90 5 0.6721085 89 5 0.772729 107 5 0.769972 132 5 0.7847084 166 5 0.627535 56 5 0.7593514 111 5 NA 0 0 0.775797 133 5 0.581104 73 5 0.773333 45 5 0.7800824 85 5 0.801054 98 5 0.7647264 255 5 0.7333333 43 5 0.8436752 58 5 0.730459 134 5 0.788172 69 5 0.6662338 32 3 0.7033684 125 5 0.9336898 71 5 0.811948 39 5 0.789608 97 5 0.7622484 162 5 0.8286590 153 5 0.777379 269 5 0.7596975 126 5 0.538203 76 5 0.6091503 104 5 0.7416667 24 3 0.807236 70 5 0.86770186 72 5 0.8173913 144 5 0.8255275 209 5 0.8031746 118 5 0.8633971 151 5 0.820768 134 5 0.7681576 0.635098 0.6282709 0.8035397 0.6245679 0.729944 0.715635 0.6661244 0.769400 0.767960 0.789227 0.646141 0.7735204 NA 0.774957 0.563597 0.7361905 0.7926511 0.797977 0.7479466 0.734325 0.8444668 0.742866 0.770176 0.6483302 0.7229023 0.9080978 0.785133 0.779183 0.7532501 0.8175890 0.759016 0.7640468 0.5245903 0.61749024 0.7109127 0.769862 0.8559746 0.8022774 0.8239833 0.7973187 0.8618585 0.808769 5 0.728143 0.767572 -3.9832e-02 5 0.738979 0.7813860 -0.04240701 0.99821405 0.03362721 weaklyHypometh 1.00000 0.934089 insignificant 0.9979822 0.01980293 weaklyHypometh 1 1.00000 insignificant -0.0562224 0.0456416 lowCoverage 1.00000 lowCoverage 0.728143 0.6906780 0.0343959 5 0.738979 0.6998433 0.03913564 3.3039e-02 0.1567466 weaklyHypermeth 2.6861e-01 1.00000 insignificant 7.3560e-01 0.043620 inconclusive 1.0000e+00 1 insignificant 0.00389936 9.4414e-01 lowCoverage 1.0000e+00 lowCoverage 0.728143 0.814815 -0.08707558 5 0.7389790 0.828821 -0.0898424 9.9990e-01 4.7344e-04 weaklyHypometh 1.0000e+00 3.6418e-02 weaklyHypometh 9.9997e-01 3.5050e-04 weaklyHypometh 1.0000e+00 3.5050e-02 weaklyHypometh -0.10154305 4.6593e-05 lowCoverage 0.0066561 lowCoverage 0.767572 0.6906780 7.4720e-02 5 0.781386 0.6998433 0.08154265 1.3354e-02 0.421667 weaklyHypermeth 1.1612e-01 1 insignificant 1.9230e-01 0.282607 insignificant 1.0000e+00 1 insignificant 0.0601218 3.0860e-01 lowCoverage 1.0000e+00 lowCoverage 0.767572 0.8148148 -0.04631014 5 0.7813860 0.8288214 -0.04743540 9.8127e-01 3.0077e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.5068e-01 7.7926e-02 insignificant 1.0000e+00 1.0000000 insignificant -0.0453206 6.5389e-02 lowCoverage 1.0000000 lowCoverage 0.6906780 0.8148148 -0.1228288 5 0.6998433 0.8288214 -0.12897805 9.9311e-01 2.4946e-02 weaklyHypometh 1.0000e+00 2.3314e-01 insignificant 0.9329214 2.4836e-01 insignificant 1.00000 1.0000e+00 insignificant -0.1054424 9.2277e-02 lowCoverage 9.7735e-01 lowCoverage chr7 6485035 6486035 25632 DAGLB ENSG00000164535 0.813036 355 5 0.9189141 127 5 0.7260684 54 4 0.8272379 205 5 0.9750187 341 4 0.826250 76 5 0.799375 131 4 0.9646489 166 5 0.894139 105 5 0.859707 48 4 0.7384650 97 5 0.844841 41 4 0.9701011 263 4 0.96954 135 4 0.731969 67 3 0.936667 28 1 1.000000 17 3 0.7568516 212 7 0.711111 41 1 0.6519383 68 5 0.9794737 74 3 0.9166667 14 1 0.649956 347 5 0.760346 64 5 0.7755797 106 5 0.8925699 62 5 0.9785354 89 5 0.697070 48 4 0.860672 65 4 0.9175926 66 5 0.7327586 48 2 0.782051 49 3 0.6927690 216 5 0.832389 83 5 0.7211359 69 4 0.7857143 27 4 0.592096 104 5 0.80666667 47 2 0.8673348 657 5 0.8707234 330 5 0.7775609 302 5 0.8605830 325 5 0.797533 167 5 0.8240168 0.903504 0.9572060 0.8611682 0.9650630 0.795305 0.969425 0.9894798 0.906797 0.795061 0.891726 0.851669 0.9571190 0.95758 0.971937 0.923372 0.9635583 0.9056882 0.597701 0.7994442 0.972172 0.9079610 0.851894 0.869500 0.8568924 0.9352946 0.9636886 0.821123 0.906922 0.9489144 1.0000000 0.933687 0.9369641 0.9734748 0.71228043 0.7956008 0.761862 0.8793103 0.8773996 0.8901805 0.8648360 0.8532596 0.838983 1 0.901048 0.864341 3.0098e-02 5 0.747459 0.6605561 0.08690267 0.03817825 0.98603072 weaklyHypermeth 1.00000 1.000000 insignificant 0.6370876 0.66038052 insignificant 1 1.00000 insignificant 0.0171880 0.6679011 lowCoverage 1.00000 lowCoverage 0.901048 0.7912088 0.0950430 5 0.747459 0.6039295 0.14352927 3.3666e-05 0.9881212 weaklyHypermeth 4.1563e-04 1.00000 weaklyHypermeth 1.1958e-01 0.970269 insignificant 1.0000e+00 1 insignificant 0.10733227 3.3177e-02 lowCoverage 4.4235e-01 lowCoverage 0.901048 0.846715 0.04143747 5 0.7474588 0.830604 -0.0831454 1.2710e-01 2.3940e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.3690e-01 6.0853e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01104701 7.2192e-01 lowCoverage 1.0000000 lowCoverage 0.864341 0.7912088 7.6049e-02 5 0.660556 0.6039295 0.05662660 2.7262e-02 0.841443 weaklyHypermeth 2.2164e-01 1 insignificant 1.1561e-01 0.969302 insignificant 9.8810e-01 1 insignificant 0.0901442 8.5924e-02 lowCoverage 8.7677e-01 lowCoverage 0.864341 0.8467153 0.00373768 5 0.6605561 0.8306042 -0.17004812 5.6942e-01 7.2006e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 2.5436e-01 4.7798e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0061410 8.7181e-01 lowCoverage 1.0000000 lowCoverage 0.7912088 0.8467153 -0.0552261 5 0.6039295 0.8306042 -0.22667472 8.2320e-01 2.1468e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.8313628 4.6523e-01 insignificant 1.00000 1.0000e+00 insignificant -0.0962853 4.9723e-02 lowCoverage 5.8498e-01 lowCoverage chr7 6777535 6778535 25638 RSPH10B2 ENSG00000169402 0.832370 479 13 0.7257973 445 13 0.6702587 259 12 0.7876650 372 15 0.7137886 130 10 0.772761 497 14 0.753238 227 10 0.8560260 408 12 0.787126 222 12 0.778869 200 10 0.7522237 607 14 0.643970 118 7 0.8494323 437 12 0.92929 104 6 0.646787 241 13 0.641501 75 5 0.618672 95 7 0.8440137 427 17 0.730435 391 13 0.8532391 371 13 0.7942344 174 11 0.7975201 147 12 0.846512 261 14 0.699735 129 6 0.8627548 141 12 0.8327159 691 14 0.7691182 176 12 0.787946 66 4 0.684386 372 13 0.8378503 629 12 0.7852187 694 14 0.827369 601 15 0.6695394 284 12 0.629686 388 12 0.7589507 327 12 0.7385281 91 6 0.675387 193 10 0.74799162 717 15 0.8538979 401 14 0.8650021 457 15 0.8055210 398 15 0.8361765 335 9 0.741101 460 10 0.8646021 0.781299 0.7408260 0.8599084 0.8556601 0.862017 0.808343 0.8622280 0.821444 0.859148 0.811186 0.836891 0.8769535 0.87626 0.870882 0.779002 0.8734827 0.8303674 0.872766 0.8836137 0.889459 0.7928924 0.903146 0.819448 0.8605309 0.8682580 0.7804275 0.838576 0.825112 0.8927366 0.8399240 0.865916 0.7925179 0.7097812 0.87161084 0.8189926 0.811074 0.7637727 0.8647054 0.8553059 0.8842337 0.8731571 0.821257 5 0.844390 0.881314 -1.8401e-02 13 0.792239 0.8056325 -0.01339328 0.98121965 0.15504263 insignificant 1.00000 1.000000 insignificant 0.9481484 0.40151473 insignificant 1 1.00000 insignificant -0.0344067 0.1798206 insignificant 1.00000 insignificant 0.844364 0.8110000 0.0599518 12 0.781304 0.6538112 0.12749319 6.0213e-05 0.9999703 weaklyHypermeth 7.2545e-04 1.00000 weaklyHypermeth 3.0395e-02 0.999844 weaklyHypermeth 3.3038e-01 1 insignificant 0.05602634 7.1842e-02 insignificant 7.7249e-01 insignificant 0.844364 0.860420 -0.02633098 12 0.7813044 0.835412 -0.0541078 8.5413e-01 4.4463e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.7330e-01 6.2526e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.06096629 6.2584e-02 insignificant 1.0000000 insignificant 0.881285 0.8110000 7.5583e-02 12 0.795403 0.6538112 0.14159138 3.7787e-07 0.999995 weaklyHypermeth 6.2979e-06 1 weaklyHypermeth 8.3807e-03 0.999076 weaklyHypermeth 1.0097e-01 1 insignificant 0.0904330 6.2905e-03 weaklyHypermeth 1.1233e-01 insignificant 0.881285 0.8604197 -0.00680671 12 0.7954026 0.8354122 -0.04000965 8.0596e-01 3.3993e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9530e-01 2.6180e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0265596 3.5882e-01 insignificant 1.0000000 insignificant 0.8110000 0.8604197 -0.0794968 12 0.6538112 0.8354122 -0.18160103 9.9988e-01 2.7134e-04 weaklyHypometh 1.0000e+00 4.0498e-03 weaklyHypometh 0.9999532 4.7058e-03 weaklyHypometh 1.00000 7.3528e-02 weaklyHypometh -0.1169926 4.4154e-03 weaklyHypometh 9.7091e-02 weaklyHypometh chr7 6929635 6930635 25639 UNC93B2 ENSG00000155070 0.835968 394 7 0.7175130 235 7 0.7751035 144 6 0.8551024 372 7 0.6601389 100 7 0.796752 369 7 0.703513 188 7 0.8355442 132 7 0.813560 142 6 0.809232 114 5 0.8185502 234 7 0.720376 87 4 0.7346161 126 5 1.00000 32 1 0.777207 147 5 0.833846 90 4 0.742946 574 3 0.8836708 385 6 0.747804 124 7 0.8932965 336 7 0.8309524 53 6 0.9233440 97 5 0.784960 265 7 0.777111 108 7 0.7710288 175 7 0.8382379 264 7 0.6572907 101 5 0.764585 64 5 0.739328 148 7 0.8413354 225 7 0.8280248 211 7 0.829693 343 7 0.7870815 195 7 0.725943 156 7 0.8069015 343 6 0.7594363 195 7 0.725163 195 7 0.80001833 237 7 0.8690150 452 7 0.8912566 327 7 0.9029128 388 7 0.9000832 203 6 0.897504 330 7 0.8855120 0.781707 0.7769431 0.9294252 0.8248348 0.863588 0.726595 0.8259654 0.786397 0.881770 0.851321 0.787025 0.8015261 0.90489 0.806857 0.821911 0.7731347 0.9263633 0.728858 0.9302591 0.830888 0.9093908 0.860991 0.830280 0.9305712 0.8859336 0.7349321 0.734426 0.880100 0.8730544 0.8434969 0.889102 0.8657634 0.5972066 0.87992648 0.7454261 0.825769 0.8387707 0.8755981 0.9260484 0.9388196 0.9471912 0.936504 5 0.780116 0.815212 -2.0096e-02 7 0.718269 0.7388309 -0.02056211 0.37679634 0.66414227 insignificant 1.00000 1.000000 insignificant 0.3604212 0.88861475 insignificant 1 1.00000 insignificant -0.0010872 0.9667875 insignificant 1.00000 insignificant 0.780116 0.7524603 0.0181995 7 0.718269 0.8152067 -0.09693788 6.1167e-04 0.8303544 weaklyHypermeth 6.8727e-03 1.00000 weaklyHypermeth 3.8923e-02 0.678790 weaklyHypermeth 4.0127e-01 1 insignificant 0.03031306 2.0177e-01 insignificant 1.0000e+00 insignificant 0.780505 0.864118 -0.10914352 7 0.7806313 0.893944 -0.1133125 9.8139e-01 2.9757e-04 weaklyHypometh 1.0000e+00 2.9075e-02 weaklyHypometh 9.8514e-01 2.4313e-03 weaklyHypometh 1.0000e+00 2.0261e-01 insignificant -0.09441723 4.0125e-05 weaklyHypometh 0.0066561 weaklyHypometh 0.815212 0.7524603 3.7081e-02 7 0.738831 0.8152067 -0.07637577 2.5776e-02 0.993572 weaklyHypermeth 2.1128e-01 1 insignificant 2.5226e-01 0.888048 insignificant 1.0000e+00 1 insignificant 0.0314003 2.1184e-01 insignificant 1.0000e+00 insignificant 0.815340 0.8641176 -0.07879174 7 0.8070683 0.8939438 -0.08687553 9.9956e-01 4.1289e-06 weaklyHypometh 1.0000e+00 1.3763e-03 weaklyHypometh 9.9866e-01 7.5534e-05 weaklyHypometh 1.0000e+00 0.0251778 weaklyHypometh -0.0933300 4.4128e-04 weaklyHypometh 0.0882558 weaklyHypometh 0.7517084 0.8641176 -0.1186393 7 0.7624086 0.8939438 -0.13153525 9.9997e-01 3.1475e-06 weaklyHypometh 1.0000e+00 7.3198e-05 weaklyHypometh 0.9994654 1.5436e-04 weaklyHypometh 1.00000 4.4562e-03 weaklyHypometh -0.1247303 1.4618e-04 weaklyHypometh 9.1265e-03 weaklyHypometh chr7 14694535 14695535 25814 ENSG00000216923 0.816453 71 3 0.7203526 121 5 0.8980392 69 5 0.9327586 56 2 0.8958754 88 5 0.736368 141 5 0.885952 79 5 0.8876984 63 5 0.760685 66 5 0.774780 96 5 0.8986842 207 5 0.851190 60 5 0.7936090 99 5 0.75000 20 2 0.975936 126 5 0.863817 71 4 0.918437 44 4 0.9579710 46 2 0.943667 126 5 0.8663670 84 4 0.7433333 21 2 0.7142857 17 2 0.788178 70 5 0.640000 38 4 0.7777778 7 0 0.8329085 97 5 0.7328492 90 5 0.772857 31 3 0.810156 112 5 0.9179894 82 5 0.7784722 78 5 0.742492 89 4 0.7850129 107 5 0.866584 100 5 0.8243789 69 5 1.0000000 10 0 0.800783 82 5 0.84069696 99 5 0.6250000 38 3 0.7906883 63 4 0.7187500 34 2 0.9333333 24 2 0.888333 54 3 0.8350985 0.829397 0.8336217 0.9036511 0.9001164 0.853427 0.884174 0.8977007 0.814398 0.909469 0.882917 0.833246 0.9325796 0.81257 0.950535 0.822511 0.9156252 0.9273231 0.929412 0.8614817 0.781863 0.8487395 0.862877 0.826471 0.7815723 0.7926759 0.7547006 0.823109 0.847336 0.8689309 0.9365809 0.853736 0.7683261 0.8200641 0.79767994 1.0000000 0.842345 0.7979153 0.7803922 0.8499940 0.9183007 0.8516340 0.935049 1 0.888055 0.825137 5.1102e-02 5 0.806445 0.7475876 0.05885790 0.00073152 0.99526682 weaklyHypermeth 0.24384 1.000000 insignificant 0.0021798 0.96197637 weaklyHypermeth 1 1.00000 insignificant 0.0854903 0.0030963 lowCoverage 0.60723 lowCoverage 0.890435 0.8329764 0.0574907 5 0.892735 0.8381638 0.05457082 8.1339e-04 0.9989892 weaklyHypermeth 8.8412e-03 1.00000 weaklyHypermeth 3.1192e-02 0.963218 weaklyHypermeth 3.3540e-01 1 insignificant 0.00352263 9.2465e-01 lowCoverage 1.0000e+00 lowCoverage 0.888055 0.859155 0.00105068 3 0.8064455 0.761540 0.0449059 2.4563e-04 2.1315e-01 lowCoverage 1.0679e-02 1.0000e+00 lowCoverage 2.1785e-01 3.0691e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.06521104 3.1795e-01 lowCoverage 1.0000000 lowCoverage 0.829201 0.8329764 1.0268e-02 5 0.830438 0.8381638 -0.00772532 2.3057e-01 0.530431 insignificant 1.0000e+00 1 insignificant 6.1174e-01 0.254625 insignificant 1.0000e+00 1 insignificant -0.0819677 5.5466e-02 lowCoverage 6.2321e-01 lowCoverage 0.825137 0.8591549 -0.04943533 3 0.7475876 0.7615396 -0.01395202 5.3523e-01 6.4741e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.1520e-01 9.8338e-02 lowCoverage 1.0000e+00 1.0000000 lowCoverage -0.0202793 7.4601e-01 lowCoverage 1.0000000 lowCoverage 0.8329764 0.8625592 -0.0660940 3 0.8381638 0.8138475 0.02431623 1.4167e-01 1.6657e-02 lowCoverage 1.0000e+00 1.6492e-01 lowCoverage 0.4109725 1.1161e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.0616884 3.7165e-01 lowCoverage 1.0000e+00 lowCoverage chr7 20751535 20752535 25952 ENSG00000210250 0.615756 61 5 0.6650794 62 5 0.4670330 30 3 0.7582353 65 3 0.8000000 21 2 0.784286 158 5 0.566667 24 3 0.8846154 72 5 0.591429 36 3 0.725000 38 5 0.7269102 124 5 0.433333 11 0 0.7858586 35 3 0.90000 18 1 0.877778 18 3 0.833333 5 0 0.500000 4 0 0.6631410 61 3 0.893333 53 3 0.8060606 116 5 0.6428571 32 5 0.8761905 30 3 0.705000 40 3 0.743651 36 3 0.7333333 38 3 0.7621053 78 5 0.6511111 53 5 0.466667 9 0 0.604762 56 3 0.7230100 95 5 0.7603865 75 5 0.724226 131 5 0.6348485 69 5 0.557576 43 5 0.7447619 88 3 0.6666667 11 2 0.715833 39 5 0.73935065 73 5 0.8497738 50 3 0.8909091 44 3 0.8385455 77 3 0.8500000 32 3 0.750735 53 3 0.6316342 0.686021 0.5468479 0.7099587 0.7192982 0.743247 0.523392 0.8394062 0.616124 0.807018 0.730500 0.479532 0.7669679 0.85965 0.838115 0.800688 0.7916005 0.7208727 0.851295 0.8350168 0.600251 0.8905597 0.780702 0.707045 0.7222222 0.7433056 0.7175926 0.573099 0.702590 0.6904594 0.7617171 0.763288 0.6953748 0.6094631 0.70860485 0.6685274 0.668787 0.6373661 0.7901881 0.8468900 0.7748006 0.7894737 0.747678 0 0.757905 0.745914 1.3323e-03 5 0.729750 0.7202201 0.00952972 0.63066028 0.65124817 insignificant 1.00000 1.000000 insignificant 0.6549136 0.45072880 insignificant 1 1.00000 insignificant 0.0144508 0.7429778 lowCoverage 1.00000 lowCoverage 0.757905 0.6718266 0.0879314 5 0.729750 0.6496442 0.08010563 3.8263e-03 0.9975297 weaklyHypermeth 3.6441e-02 1.00000 weaklyHypermeth 9.3296e-02 0.929505 insignificant 8.4814e-01 1 insignificant 0.03738629 4.0605e-01 lowCoverage 1.0000e+00 lowCoverage 0.757905 0.792969 -0.04520525 3 0.7297498 0.840112 -0.1103622 9.7019e-01 1.0026e-02 lowCoverage 1.0000e+00 3.3421e-01 lowCoverage 9.6899e-01 1.4315e-02 lowCoverage 1.0000e+00 5.9648e-01 lowCoverage -0.12210030 6.3134e-03 lowCoverage 0.2525364 lowCoverage 0.745914 0.6718266 8.6471e-02 5 0.720220 0.6496442 0.07057591 2.6384e-03 0.990479 weaklyHypermeth 2.6923e-02 1 weaklyHypermeth 7.8068e-02 0.849564 insignificant 7.0971e-01 1 insignificant 0.0229355 5.8906e-01 lowCoverage 1.0000e+00 lowCoverage 0.745914 0.7929687 -0.04096042 3 0.7202201 0.8401120 -0.11989194 9.4151e-01 2.4390e-03 lowCoverage 1.0000e+00 3.0487e-01 lowCoverage 8.6501e-01 1.2102e-02 lowCoverage 1.0000e+00 0.7982107 lowCoverage -0.1365511 2.5099e-03 lowCoverage 0.2339790 lowCoverage 0.6718266 0.7929687 -0.1346730 3 0.6496442 0.8401120 -0.19046785 9.9991e-01 2.6854e-05 lowCoverage 1.0000e+00 5.5945e-04 lowCoverage 0.9995037 3.5399e-03 lowCoverage 1.00000 6.1032e-02 lowCoverage -0.1594866 2.2088e-03 lowCoverage 5.8127e-02 lowCoverage chr7 22671135 22672135 25995 ENSG00000179460 0.874637 857 30 0.8623232 546 24 0.8138875 398 25 0.9288531 622 26 0.8473066 422 25 0.888576 825 28 0.839111 669 22 0.8860963 580 28 0.888212 333 19 0.873151 380 27 0.8784795 1063 33 0.729505 370 17 0.9169405 572 29 0.97535 182 11 0.884605 535 25 0.845237 225 19 0.729610 195 11 0.8801177 1057 30 0.888111 939 31 0.9516902 826 28 0.8042787 219 21 0.8986398 205 12 0.775792 354 19 0.788081 176 13 0.9859861 601 13 0.9197433 821 31 0.7532660 359 19 0.639511 153 11 0.804645 647 22 0.9097290 750 26 0.9345036 884 31 0.843898 821 32 0.7801850 562 26 0.914579 711 33 0.9645662 490 24 0.9722222 228 9 0.728226 278 25 0.89971268 864 31 0.8796964 877 24 0.8641066 673 27 0.9004649 736 24 0.9337043 841 19 0.849077 707 23 0.9315825 0.899461 0.8953996 0.9633807 0.9518511 0.931522 0.908672 0.9262823 0.926139 0.964593 0.892666 0.816070 0.9552213 0.95013 0.933173 0.951264 0.9126538 0.9498528 0.947323 0.9566091 0.913604 0.9569912 0.924038 0.870352 0.9650071 0.9397770 0.8642079 0.903230 0.913065 0.9556417 0.9488258 0.917111 0.8623864 0.9677042 0.97365212 0.9597902 0.922941 0.9601498 0.9410232 0.9566223 0.9484284 0.9622518 0.949279 7 0.920760 0.923103 -5.4537e-04 27 0.817640 0.8063783 0.01126161 0.08645531 0.85111701 insignificant 1.00000 1.000000 insignificant 0.1436712 0.78907053 insignificant 1 1.00000 insignificant 0.0309172 0.3319545 insignificant 1.00000 insignificant 0.920866 0.9233227 -0.0065046 27 0.852244 0.8169874 0.03525675 3.0024e-02 0.4773416 inconclusive 2.4813e-01 1.00000 insignificant 8.9130e-01 0.243090 insignificant 1.0000e+00 1 insignificant -0.00749170 8.6754e-01 insignificant 1.0000e+00 insignificant 0.920760 0.961920 -0.02474096 22 0.8109380 0.864139 -0.0532006 6.6761e-01 3.1478e-02 weaklyHypometh 1.0000e+00 8.5075e-01 insignificant 9.9927e-01 3.8476e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.01631980 4.3182e-01 insignificant 1.0000000 insignificant 0.924494 0.9238887 -3.6276e-03 27 0.847731 0.8105771 0.03715389 9.0193e-01 0.490606 insignificant 1.0000e+00 1 insignificant 9.9905e-01 0.441079 insignificant 1.0000e+00 1 insignificant -0.0384089 4.5571e-01 insignificant 1.0000e+00 insignificant 0.923849 0.9621311 -0.02376835 22 0.8349520 0.8833038 -0.04835177 9.9209e-01 3.0497e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9947e-01 3.0026e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant -0.0472370 1.5437e-01 insignificant 1.0000000 insignificant 0.9232982 0.9621608 -0.0245463 22 0.8121713 0.8833038 -0.07113251 9.1391e-01 1.8123e-02 weaklyHypometh 1.0000e+00 1.7768e-01 insignificant 0.9738596 4.2432e-01 insignificant 1.00000 1.0000e+00 insignificant -0.0088281 8.4555e-01 insignificant 1.0000e+00 insignificant chr7 23766635 23767635 26036 STK31 ENSG00000196335 0.834902 72 5 0.706102 121 5 0.972414 41 2 0.925000 23 2 0.885417 28 2 0.881674 37 5 0.538889 39 2 0.785741 71 5 0.8666667 36 2 0.9047619 49 5 0.921491 125 5 0.9750000 12 1 0.872789 82 5 0.650000 20 4 0.612874 43 2 0.75000000 6 0 0.795299 93 4 1.000000 8 0 0.8591575 74 5 0.866667 18 1 0.580000 18 1 0.733333 13 0 1.000000 13 1 0.692308 18 1 1.000000 8 0 0.9202899 64 2 0.941667 43 5 1.000000 3 0 0.943651 90 2 0.970238 66 2 0.877451 82 5 0.814286 41 5 0.820853 66 3 0.8441379 54 5 0.954966 120 2 1.000000 4 0 0.655556 35 5 0.6694444 102 5 0.846667 27 5 0.945833 70 5 0.966667 34 5 0.933333 16 0 0.633333 13 1 0.777267 0.6878260 0.9525862 0.8921875 0.857422 0.886228 0.587674 0.814871 0.8645833 0.8660714 0.926398 0.9570312 0.887755 0.729721 0.6783764 0.8038980 0.837473 1.000000 0.8851591 0.895833 0.653125 0.729167 1.000000 0.731148 0.942264 0.9254982 0.942187 NA 0.950025 0.8800430 0.7784926 0.774554 0.8051114 0.8071121 0.95399306 0.9065593 0.684028 0.6471354 0.8489583 0.9472656 0.9739583 0.947917 0.650000 0 0.838677 0.856209 0.00127636 2 0.844945 0.897615 -0.0526702 0.950321 2.5268e-02 lowCoverage 1 1.0000000 lowCoverage 0.9885397 0.0966745 lowCoverage 1 1.00000 lowCoverage -0.04252640 0.3923884 lowCoverage 1 lowCoverage 0.838677 0.787402 0.0589908 5 0.844945 0.814648 0.0302962 2.9276e-01 9.5611e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.7628e-01 8.8079e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0060827 9.2711e-01 lowCoverage 1.0000e+00 lowCoverage 0.838677 0.906250 -0.0876888 5 0.844945 0.920527 -0.0755819 9.9959e-01 2.4993e-02 weaklyHypometh 1.0000e+00 9.9889e-01 insignificant 9.6641e-01 1.5287e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0349245 0.62391548 lowCoverage 1.00000 lowCoverage 0.856209 0.787402 0.0653682 2 0.897615 0.814648 0.0829664 1.8532e-02 9.9942e-01 lowCoverage 2.3458e-01 1.0000e+00 lowCoverage 9.7234e-02 9.9755e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.04860910 5.0598e-01 lowCoverage 1.0000e+00 lowCoverage 0.856209 0.906250 -0.02902032 2 0.897615 0.920527 -0.0229117 6.7083e-01 5.6019e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 4.9297e-01 5.3861e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.00760193 0.9201156 lowCoverage 1.00000 lowCoverage 0.7874016 0.906250 -0.1231507 5 0.814648 0.920527 -0.1058781 9.9975e-01 3.3010e-02 weaklyHypometh 1.0000e+00 4.5219e-01 insignificant 0.96185428 1.4424e-01 insignificant 1.000000 1.0000e+00 insignificant -0.041007 6.3933e-01 lowCoverage 1.000000 lowCoverage chr7 24903535 24904535 26089 OSBPL3 ENSG00000070882 0.767610 410 12 0.817188 177 12 0.730126 190 12 0.889769 271 12 0.802670 94 9 0.830615 400 12 0.788146 171 12 0.804950 196 12 0.7393821 127 12 0.8705322 118 12 0.793084 428 12 0.7619048 65 7 0.856108 177 12 0.867347 24 2 0.849192 169 12 0.81414113 87 7 0.715659 63 7 0.857594 337 12 0.7982962 176 12 0.871701 330 12 0.943333 37 5 0.839133 85 11 0.877254 223 12 0.794520 87 11 0.891468 64 8 0.7301744 238 12 0.862315 131 9 0.611111 46 4 0.763948 133 10 0.763316 263 12 0.751403 221 12 0.735363 398 12 0.791020 160 12 0.7552229 171 12 0.833005 212 12 0.751984 61 7 0.745040 90 9 0.7120712 258 12 0.830068 444 12 0.824640 458 12 0.833537 272 12 0.790350 307 8 0.832256 326 12 0.837674 0.8312221 0.7715762 0.8752136 0.865102 0.857826 0.827747 0.799007 0.7794183 0.8726668 0.807839 0.8170330 0.867172 0.828357 0.8560366 0.8064875 0.743132 0.858010 0.8384620 0.865822 0.907451 0.924817 0.867761 0.797853 0.897821 0.8112409 0.845494 0.711963 0.784921 0.7842568 0.7889889 0.808795 0.7826425 0.7630952 0.83334312 0.7445949 0.762106 0.7850587 0.8622088 0.8299022 0.8524869 0.814480 0.884372 4 0.836160 0.817238 0.01790784 12 0.857165 0.805331 0.0518334 0.301226 9.9990e-01 insignificant 1 1.0000000 insignificant 0.8328199 0.9886569 insignificant 1 1.00000 insignificant 0.01435574 0.6212033 insignificant 1 insignificant 0.836078 0.778361 0.0555470 12 0.848763 0.724329 0.1244335 1.3492e-03 9.9976e-01 weaklyHypermeth 1.9977e-02 1.0000e+00 weaklyHypermeth 4.0307e-02 9.9702e-01 weaklyHypermeth 5.9275e-01 1.0000e+00 insignificant 0.0465770 4.6865e-02 weaklyHypermeth 8.6787e-01 insignificant 0.836037 0.866076 -0.0197991 12 0.839310 0.790701 0.0486094 9.9246e-01 3.2956e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4225e-01 5.0004e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0108694 0.44482084 insignificant 1.00000 insignificant 0.817048 0.778361 0.0372940 12 0.793880 0.724329 0.0695511 9.1650e-02 9.6049e-01 insignificant 9.9619e-01 1.0000e+00 insignificant 1.4473e-01 9.6139e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03222123 3.1715e-01 insignificant 1.0000e+00 insignificant 0.816857 0.866076 -0.03609357 12 0.780998 0.790701 -0.0097032 9.9996e-01 1.0580e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7060e-01 3.7822e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02522513 0.3730054 insignificant 1.00000 insignificant 0.7789474 0.866076 -0.0732247 12 0.738350 0.790701 -0.0523512 9.9945e-01 8.1203e-04 weaklyHypometh 1.0000e+00 1.6917e-02 weaklyHypometh 0.99220443 2.7032e-02 weaklyHypometh 1.000000 4.9148e-01 insignificant -0.057446 1.8756e-02 weaklyHypometh 0.457471 insignificant chr7 25099035 25100035 26112 OSBPL3 ENSG00000070882 0.656682 124 6 0.700087 161 7 0.496694 75 7 0.789919 166 6 0.621858 59 6 0.701002 231 6 0.684028 39 4 0.733955 100 7 0.6931818 48 5 0.5357143 62 6 0.774601 308 7 0.6250000 8 0 0.834820 91 6 0.543254 50 3 0.653454 59 6 0.33333333 12 0 0.666667 14 0 0.805111 134 6 0.7392857 88 5 0.821591 172 7 0.766667 36 3 0.808547 49 6 0.796049 89 6 0.771645 56 6 0.861111 24 2 0.7110278 160 7 0.761459 81 5 0.703704 14 0 0.860210 106 6 0.757253 142 7 0.759761 151 7 0.762322 239 7 0.595436 110 7 0.6660096 65 6 0.745671 117 6 0.694444 12 0 0.629258 75 5 0.8739669 148 6 0.843915 113 6 0.882003 128 6 0.771111 129 6 0.763889 45 6 0.826418 144 6 0.757656 0.7005904 0.5508385 0.8308934 0.722665 0.722038 0.545793 0.782881 0.7014563 0.8980583 0.752511 0.6867998 0.796648 0.541909 0.6101302 0.4759407 0.650485 0.788235 0.7298890 0.834632 0.882848 0.796863 0.757362 0.653606 0.849515 0.6988930 0.744215 0.836616 0.853881 0.7684869 0.7600453 0.801795 0.6393601 0.7663205 0.75332659 0.6747573 0.631330 0.7548544 0.8409616 0.7541481 0.7702670 0.724110 0.782642 0 0.756122 0.787271 -0.02935800 6 0.639989 0.723742 -0.0837536 0.984138 3.1632e-02 weaklyHypometh 1 1.0000000 insignificant 0.9987247 0.0041476 weaklyHypometh 1 0.57931 insignificant -0.10613436 0.0019375 weaklyHypometh 1 insignificant 0.756892 0.732448 0.0262001 6 0.652715 0.803155 -0.1504404 6.0469e-01 8.9241e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.6686e-01 6.0592e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0302858 5.5060e-01 insignificant 1.0000e+00 insignificant 0.756122 0.803220 -0.0534229 6 0.639989 0.896352 -0.2563637 9.9987e-01 5.3385e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9998e-01 8.4653e-03 weaklyHypometh 1.0000e+00 6.5118e-01 insignificant -0.1469554 0.00066616 weaklyHypometh 0.08327 weaklyHypometh 0.788091 0.732448 0.0545747 6 0.734991 0.803155 -0.0681637 1.4472e-01 9.8554e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.4080e-01 9.9791e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.07584860 1.2625e-01 insignificant 1.0000e+00 insignificant 0.787271 0.803220 -0.02182062 6 0.723742 0.896352 -0.1726101 9.8844e-01 7.7658e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8541e-01 5.7479e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04082105 0.1638222 insignificant 1.00000 insignificant 0.7324478 0.802867 -0.0733379 6 0.803155 0.886930 -0.0837746 1.0000e+00 5.2451e-02 insignificant 1.0000e+00 6.7245e-01 insignificant 0.99999897 3.2590e-01 insignificant 1.000000 1.0000e+00 insignificant -0.116670 3.7361e-02 weaklyHypometh 0.747223 insignificant chr7 25900935 25901935 26125 ENSG00000222101 0.122744 610 12 0.215425 348 14 0.076002 468 16 0.145157 601 12 0.131260 302 14 0.140440 925 15 0.022272 513 14 0.112956 299 14 0.1074083 456 14 0.0915179 431 16 0.101463 600 14 0.0655902 509 14 0.110935 337 14 1.000000 4 0 0.113548 555 14 0.03968531 517 14 0.047592 522 14 0.165874 845 12 0.1247076 334 16 0.131415 635 13 0.126907 222 17 0.160176 414 10 0.162925 363 16 0.181800 287 14 0.132506 309 10 0.0915590 518 14 0.169050 382 13 0.153675 122 11 0.108560 350 16 0.187269 597 16 0.122685 574 16 0.121185 609 16 0.086806 245 14 0.0813296 436 16 0.202891 287 12 0.016667 149 10 0.145216 180 14 0.1060398 484 16 0.134944 1008 15 0.133126 665 15 0.117263 808 12 0.121707 835 12 0.214963 771 12 0.029327 0.0215119 0.0020639 0.0086376 0.012563 0.045871 0.024477 0.032124 0.0312681 0.0088528 0.020009 0.0718798 0.028089 NA 0.0362527 0.0429978 0.045693 0.019149 0.0338941 0.054124 0.087121 0.036746 0.016517 0.052967 0.017760 0.0138381 0.044130 0.099989 0.015709 0.0209954 0.0143793 0.035500 0.0080559 0.0077665 0.13342208 0.0229014 0.088375 0.0122112 0.0288559 0.0298658 0.0099024 0.013389 0.034196 10 0.106615 0.064883 0.00318217 16 0.213932 0.199399 0.0145335 0.045713 9.8984e-01 weaklyHypermeth 1 1.0000000 insignificant 0.1934695 0.9780970 insignificant 1 1.00000 insignificant 0.01010810 0.8300404 insignificant 1 insignificant 0.106342 0.106682 -0.0080310 16 0.121454 0.130181 -0.0087278 1.4645e-02 3.0428e-01 inconclusive 1.8080e-01 1.0000e+00 insignificant 2.4190e-02 9.9716e-01 inconclusive 3.9656e-01 1.0000e+00 insignificant 0.0468081 3.8082e-01 insignificant 1.0000e+00 insignificant 0.106615 0.149498 0.0028490 12 0.213932 0.210048 0.0038837 7.9242e-02 9.2285e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.7347e-01 5.9772e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0088989 0.85769126 insignificant 1.00000 insignificant 0.062922 0.106682 -0.0124967 16 0.119916 0.130181 -0.0102652 3.1192e-01 5.9353e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.6912e-01 9.7509e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03670000 2.2432e-01 insignificant 1.0000e+00 insignificant 0.064883 0.149498 0.00559525 12 0.199399 0.210048 -0.0106498 5.3454e-01 6.3134e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.0118e-01 3.2488e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00120922 0.9536635 insignificant 1.00000 insignificant 0.1066816 0.149082 0.0145011 12 0.130181 0.117113 0.0130684 4.5556e-01 5.0921e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.98963768 2.8125e-01 insignificant 1.000000 1.0000e+00 insignificant -0.037909 2.5955e-01 insignificant 1.000000 insignificant chr7 26514135 26515135 26150 ENSG00000214870 0.812007 300 9 0.677507 141 9 0.672034 169 9 0.792042 172 9 0.745714 89 9 0.732510 263 9 0.568572 98 9 0.675724 197 9 0.7680653 91 9 0.7163407 101 9 0.790497 311 9 0.7568182 71 9 0.810158 99 9 0.656926 51 4 0.812035 114 9 0.59938272 82 5 0.783991 107 6 0.807979 214 9 0.8186492 150 9 0.788633 277 9 0.846667 43 3 0.856275 86 9 0.799345 164 9 0.742593 48 3 0.743251 61 8 0.7049043 183 9 0.911905 51 3 0.779870 65 9 0.686233 123 9 0.734129 209 9 0.789074 178 9 0.671814 306 9 0.672719 181 9 0.6790866 133 9 0.728683 190 9 0.819444 50 5 0.554467 90 9 0.6851534 180 9 0.793929 198 9 0.823170 280 9 0.793729 216 9 0.866089 233 9 0.885413 263 9 0.812826 0.6465298 0.7156640 0.8167682 0.759673 0.778740 0.651167 0.709539 0.7487656 0.8470478 0.776718 0.8057617 0.795225 0.723556 0.7959741 0.6671007 0.782934 0.798191 0.8259821 0.808007 0.854167 0.869492 0.838105 0.814128 0.808535 0.7961526 0.901367 0.876646 0.721975 0.8275512 0.8181389 0.812262 0.6675354 0.7052014 0.75201104 0.8513455 0.642607 0.7097591 0.8043387 0.8441560 0.8551655 0.866457 0.893884 3 0.768163 0.819380 -0.04180234 9 0.758451 0.727868 0.0305832 0.886616 1.3646e-02 weaklyHypometh 1 1.0000000 insignificant 0.9613418 0.0116150 weaklyHypometh 1 0.96792 insignificant -0.03289224 0.2327028 insignificant 1 insignificant 0.768163 0.709951 0.0670185 9 0.758451 0.700811 0.0576397 2.5847e-04 9.9643e-01 weaklyHypermeth 4.3079e-03 1.0000e+00 weaklyHypermeth 1.1636e-02 9.9813e-01 weaklyHypermeth 2.1157e-01 1.0000e+00 insignificant 0.0493537 2.4311e-01 insignificant 1.0000e+00 insignificant 0.767904 0.829412 -0.0725273 9 0.745165 0.822175 -0.0770104 9.9996e-01 1.7027e-05 weaklyHypometh 1.0000e+00 5.1142e-03 weaklyHypometh 9.9999e-01 7.7686e-05 weaklyHypometh 1.0000e+00 1.9421e-02 weaklyHypometh -0.0931866 0.00322220 weaklyHypometh 0.23016 insignificant 0.819380 0.709951 0.1071788 9 0.727868 0.700811 0.0270565 4.6365e-07 9.9799e-01 weaklyHypermeth 1.2879e-05 1.0000e+00 weaklyHypermeth 3.4560e-04 9.9996e-01 weaklyHypermeth 1.1149e-02 1.0000e+00 weaklyHypermeth 0.08224597 7.6612e-02 insignificant 1.0000e+00 insignificant 0.820955 0.829412 -0.03151487 9 0.769015 0.822175 -0.0531603 9.5375e-01 1.1800e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4861e-01 3.3264e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.06029434 0.0517864 insignificant 1.00000 insignificant 0.7100737 0.829412 -0.1392197 9 0.681136 0.822175 -0.1410393 1.0000e+00 2.9104e-09 weaklyHypometh 1.0000e+00 1.7120e-07 weaklyHypometh 0.99999966 1.6027e-06 weaklyHypometh 1.000000 2.2895e-04 weaklyHypometh -0.142540 8.0309e-03 weaklyHypometh 0.243362 insignificant chr7 28861135 28862135 26229 CREB5 ENSG00000146592 0.842188 82 6 0.645195 104 6 0.690625 35 3 0.839630 129 6 0.863946 29 4 0.830448 181 6 0.599405 49 6 0.656778 107 6 0.5476190 23 0 0.9285714 36 3 0.599842 154 6 0.8571429 20 0 0.813972 61 6 0.753968 29 2 0.571324 54 4 0.66666667 12 0 0.500000 2 0 0.778890 112 6 0.7310185 72 6 0.767914 139 6 0.512897 25 2 0.810438 39 5 0.696372 53 6 0.499802 64 6 0.817460 61 6 0.8300254 118 6 0.411058 35 2 0.911538 26 2 0.759398 78 6 0.567982 102 6 0.517530 98 6 0.735392 170 6 0.820752 75 6 0.5032444 50 6 0.595522 58 5 0.333333 8 0 0.457155 81 6 0.7371795 91 6 0.733816 78 6 0.776474 114 6 0.737368 93 6 0.789116 48 4 0.671597 193 6 0.825273 0.6406835 0.6725352 0.8433490 0.881958 0.791477 0.622233 0.751417 0.6197183 0.9380282 0.721022 0.8544601 0.786101 0.763246 0.5153273 0.7464789 NA 0.777857 0.7327856 0.730606 0.600268 0.748755 0.814755 0.506819 0.792645 0.7686086 0.591820 0.795579 0.751764 0.6967838 0.6260641 0.811740 0.7127004 0.4907393 0.69480774 0.4929577 0.477095 0.7386782 0.7423964 0.7990882 0.7537123 0.740711 0.752668 0 0.749650 0.730725 0.02183753 6 0.760769 0.588923 0.1718458 0.105026 9.6737e-01 insignificant 1 1.0000000 insignificant 0.1035785 0.9854947 insignificant 1 1.00000 insignificant 0.05176615 0.3537219 lowCoverage 1 lowCoverage 0.749650 0.641873 0.1153737 6 0.760769 0.672471 0.0882981 1.3905e-03 9.9842e-01 weaklyHypermeth 2.0152e-02 1.0000e+00 weaklyHypermeth 2.2115e-02 9.9780e-01 weaklyHypermeth 3.7483e-01 1.0000e+00 insignificant 0.1497261 1.0343e-01 lowCoverage 1.0000e+00 lowCoverage 0.749475 0.762357 -0.0103641 6 0.730865 0.695956 0.0349091 4.3098e-01 3.4752e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.5633e-01 4.0637e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0174171 0.61605735 lowCoverage 1.00000 lowCoverage 0.730725 0.641873 0.0870768 6 0.588923 0.672471 -0.0835477 5.2041e-02 8.9214e-01 insignificant 5.9138e-01 1.0000e+00 insignificant 2.7456e-01 7.3186e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.09795998 2.9271e-01 lowCoverage 1.0000e+00 lowCoverage 0.731567 0.762357 -0.02813381 6 0.662538 0.695956 -0.0334175 7.3438e-01 5.7333e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 8.6248e-01 1.2599e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.06918325 0.1992636 lowCoverage 1.00000 lowCoverage 0.6408840 0.762357 -0.1158298 6 0.631530 0.695956 -0.0644263 9.9991e-01 3.0863e-02 weaklyHypometh 1.0000e+00 4.2865e-01 insignificant 0.99877406 1.0602e-01 insignificant 1.000000 1.0000e+00 insignificant -0.167143 7.4507e-02 lowCoverage 1.000000 lowCoverage chr7 29628635 29629635 26255 PRR15 ENSG00000176532 0.652583 195 5 0.481093 107 5 0.598556 107 5 0.689569 173 5 0.684921 49 5 0.686894 120 5 0.621658 154 5 0.636779 145 5 0.6171169 104 5 0.6835784 61 5 0.672778 176 5 0.5725490 66 5 0.683249 95 5 0.709615 45 5 0.671569 57 4 0.39777778 35 3 0.584524 45 3 0.628686 191 5 0.6320000 120 5 0.565222 103 5 0.830719 66 5 0.623184 62 5 0.619506 151 5 0.504118 92 5 0.659022 90 5 0.6238239 137 5 0.460909 45 4 0.533175 65 5 0.695590 117 5 0.720945 133 5 0.622356 138 5 0.777625 90 4 0.400493 96 5 0.5200000 93 5 0.679744 96 5 0.692308 43 3 0.576569 91 5 0.5437594 172 5 0.641537 237 5 0.653699 161 5 0.600818 188 5 0.684786 165 5 0.646005 198 5 0.689634 0.5296875 0.6036638 0.6720095 0.735141 0.713678 0.627910 0.655510 0.5790517 0.7040200 0.683657 0.5601079 0.692516 0.763058 0.7129249 0.4727802 0.644965 0.669271 0.6601601 0.561883 0.867497 0.619306 0.616980 0.541323 0.666622 0.6712856 0.424216 0.568379 0.748419 0.7525385 0.6743447 0.728053 0.4308768 0.5356623 0.74924980 0.6199859 0.622395 0.5618333 0.6457540 0.6417499 0.6385079 0.705479 0.652479 4 0.682961 0.687184 -0.01651354 5 0.636521 0.647747 -0.0112265 0.781983 3.3716e-01 insignificant 1 1.0000000 insignificant 0.7436128 0.5314647 insignificant 1 1.00000 insignificant -0.01571189 0.6644461 lowCoverage 1 lowCoverage 0.682961 0.570220 0.1175605 5 0.636521 0.538039 0.0984821 7.4273e-05 9.9472e-01 weaklyHypermeth 1.3754e-03 1.0000e+00 weaklyHypermeth 5.3762e-02 9.8609e-01 insignificant 7.3647e-01 1.0000e+00 insignificant 0.0547237 2.8983e-01 lowCoverage 1.0000e+00 lowCoverage 0.682961 0.716544 -0.0092030 5 0.636521 0.643991 -0.0074705 6.3075e-01 4.3778e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.9504e-01 3.7654e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0218332 0.33039622 lowCoverage 1.00000 lowCoverage 0.687184 0.570220 0.1224413 5 0.647747 0.538039 0.1097086 1.0125e-03 9.9863e-01 weaklyHypermeth 1.6330e-02 1.0000e+00 weaklyHypermeth 6.1051e-02 9.9664e-01 insignificant 8.0330e-01 1.0000e+00 insignificant 0.07043555 2.2285e-01 lowCoverage 1.0000e+00 lowCoverage 0.687184 0.716544 0.00675180 5 0.647747 0.643991 0.0037560 6.0859e-01 6.4958e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.1851e-01 6.2278e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00612129 0.8596142 lowCoverage 1.00000 lowCoverage 0.5702200 0.716544 -0.1316973 5 0.538039 0.643991 -0.1059526 9.9569e-01 6.4306e-03 weaklyHypometh 1.0000e+00 1.1908e-01 insignificant 0.99621748 5.8332e-02 insignificant 1.000000 8.5783e-01 insignificant -0.076557 1.5036e-01 lowCoverage 1.000000 lowCoverage chr7 30994235 30995235 26322 GHRHR ENSG00000106128 0.653292 208 7 0.519339 187 7 0.732493 109 7 0.559786 161 7 0.353365 52 3 0.722154 210 7 0.674615 146 7 0.606693 200 7 0.6150183 145 7 0.6570724 151 7 0.747893 218 7 0.6816327 54 3 0.512777 197 7 0.875000 16 0 0.686731 127 7 0.53819444 104 7 0.147826 126 3 0.669364 187 7 0.6334017 143 7 0.572677 181 7 0.635115 86 7 0.471814 92 7 0.775096 130 7 0.726662 87 7 0.664059 159 5 0.7129721 307 7 0.723601 76 7 0.713580 25 3 0.684996 197 7 0.699272 286 7 0.586854 302 7 0.696425 207 7 0.324344 276 7 0.1967752 153 7 0.333333 9 0 0.082908 146 7 0.368188 74 7 0.0417399 359 7 0.478851 186 7 0.587218 157 7 0.448106 109 5 0.609127 82 7 0.451368 144 7 0.561531 0.4367283 0.6450263 0.4538127 0.326454 0.624235 0.602369 0.509954 0.5177494 0.5529822 0.662237 0.5948316 0.397948 0.565238 0.5378252 0.5456640 0.395891 0.578413 0.5341468 0.399059 0.543291 0.368708 0.644176 0.629725 0.570461 0.6090418 0.614092 0.659892 0.576720 0.5697043 0.5698917 0.629316 0.2917347 0.1805631 0.28624510 0.0697953 0.517480 0.0387545 0.3776113 0.4657467 0.3464196 0.483062 0.394555 1 0.520192 0.622825 -0.05222874 7 0.632470 0.601375 0.0310951 0.999615 3.6212e-02 weaklyHypometh 1 1.0000000 insignificant 0.9994589 0.0289554 weaklyHypometh 1 1.00000 insignificant -0.06623774 0.1191985 insignificant 1 insignificant 0.520192 0.174384 0.3562646 7 0.632470 0.165860 0.4666105 1.7354e-31 1.0000e+00 hypermethylated 5.7847e-29 1.0000e+00 hypermethylated 7.8130e-10 1.0000e+00 hypermethylated 1.5626e-07 1.0000e+00 hypermethylated 0.3834180 2.6597e-04 hypermethylated 1.2453e-02 hypermethylated 0.520219 0.457227 0.1182429 7 0.622700 0.495738 0.1269614 4.3717e-05 9.9970e-01 weaklyHypermeth 4.3717e-03 1.0000e+00 weaklyHypermeth 2.2468e-03 9.9857e-01 weaklyHypermeth 2.2468e-01 1.0000e+00 insignificant 0.0930324 0.07818362 insignificant 1.00000 insignificant 0.622825 0.174384 0.4331177 7 0.601375 0.165860 0.4355154 1.6924e-30 1.0000e+00 hypermethylated 1.6924e-27 1.0000e+00 hypermethylated 6.9180e-10 1.0000e+00 hypermethylated 2.7879e-07 1.0000e+00 hypermethylated 0.44965579 1.9492e-04 hypermethylated 1.3923e-02 hypermethylated 0.623077 0.457227 0.16260423 7 0.677958 0.495738 0.1822201 1.3070e-09 9.9991e-01 weaklyHypermeth 2.1784e-07 1.0000e+00 weaklyHypermeth 6.5060e-05 9.9989e-01 weaklyHypermeth 1.0843e-02 1.0000e+00 weaklyHypermeth 0.15927018 0.0052591 weaklyHypermeth 0.47810 insignificant 0.1746032 0.457227 -0.2814383 7 0.177534 0.495738 -0.3182045 9.9154e-01 8.4663e-09 hypomethylated 1.0000e+00 4.4560e-07 hypomethylated 0.99535593 3.9978e-05 hypomethylated 1.000000 1.9037e-03 hypomethylated -0.290386 2.3713e-03 weaklyHypometh 0.091481 weaklyHypometh chr7 34327335 34328335 26416 ENSG00000202431 0.097534 236 5 0.071251 168 5 0.073921 155 5 0.113596 202 5 0.223291 67 5 0.278339 388 7 0.124908 124 5 0.064876 196 5 0.0645634 235 5 0.0976786 250 5 0.282475 108 5 0.0655344 187 5 0.052968 253 5 0.086064 165 5 0.067859 267 5 0.06238095 127 5 0.065931 98 5 0.123294 255 5 0.0326667 95 5 0.096349 248 5 0.091837 32 3 0.102491 199 5 0.099535 139 5 0.045833 62 4 0.193798 176 5 0.1612883 181 5 0.031614 173 5 0.119962 123 5 0.081594 165 5 0.088821 238 5 0.088031 162 5 0.086188 226 7 0.639811 74 5 0.4406179 83 5 0.800000 14 0 0.542857 42 5 0.591270 30 5 0.4190476 110 5 0.191417 301 7 0.243646 205 7 0.112864 234 5 0.190174 165 5 0.251304 227 7 0.140243 0.0722999 0.1643010 0.1107115 0.143495 0.193395 0.122211 0.076311 0.0738854 0.1136630 0.224097 0.0630578 0.075080 0.102413 0.0643085 0.0550794 0.067633 0.172165 0.0330494 0.156174 0.121164 0.096998 0.093296 0.079012 0.195278 0.2227289 0.040092 0.090358 0.077237 0.1193764 0.1024631 0.119383 0.6592718 0.6380879 0.83385891 0.5586714 0.507108 0.4219136 0.2431380 0.2155728 0.1062687 0.189586 0.235321 5 0.117416 0.117804 -0.00130843 5 0.113016 0.085245 0.0277713 0.453491 9.7506e-01 insignificant 1 1.0000000 insignificant 0.6132721 0.9632151 insignificant 1 1.00000 insignificant 0.00802469 0.6967407 lowCoverage 1 lowCoverage 0.117462 0.560907 -0.4456352 5 0.130397 0.621091 -0.4906935 1.0000e+00 2.2598e-31 hypomethylated 1.0000e+00 2.2598e-28 hypomethylated 1.0000e+00 8.3625e-09 hypomethylated 1.0000e+00 4.1812e-06 hypomethylated -0.4649932 2.7396e-04 lowCoverage 1.2453e-02 lowCoverage 0.117462 0.214664 -0.1006318 5 0.130397 0.182203 -0.0518061 8.5166e-01 2.3009e-05 weaklyHypometh 1.0000e+00 5.1142e-03 weaklyHypometh 9.5566e-01 2.1369e-04 weaklyHypometh 1.0000e+00 3.5616e-02 weaklyHypometh -0.0906070 0.01589574 weaklyHypometh 0.51277 insignificant 0.118245 0.560907 -0.4444986 5 0.117212 0.621091 -0.5038790 1.0000e+00 1.3977e-22 hypomethylated 1.0000e+00 1.3977e-19 hypomethylated 1.0000e+00 6.9329e-09 hypomethylated 1.0000e+00 6.9329e-06 hypomethylated -0.47301790 3.0117e-04 lowCoverage 1.6732e-02 lowCoverage 0.118245 0.214664 -0.09658487 5 0.117212 0.182203 -0.0649916 8.6504e-01 5.8881e-06 weaklyHypometh 1.0000e+00 1.4720e-03 weaklyHypometh 8.3251e-01 5.7598e-05 weaklyHypometh 1.0000e+00 2.8799e-02 weaklyHypometh -0.09863168 0.0114557 lowCoverage 0.67387 lowCoverage 0.5609065 0.214664 0.3576998 5 0.621091 0.182203 0.4388874 3.1316e-09 1.0000e+00 hypermethylated 3.1316e-06 1.0000e+00 hypermethylated 0.00018165 1.0000e+00 hypermethylated 0.060551 1.0000e+00 hypermethylated 0.374386 6.2350e-04 lowCoverage 0.036205 lowCoverage chr7 36286835 36287835 26457 EEPD1 ENSG00000122547 0.061299 301 7 0.049446 456 7 0.087485 291 7 0.054920 350 7 0.037170 186 7 0.270079 520 7 0.186551 215 7 0.055513 251 7 0.0714360 377 7 0.0285455 308 7 0.125932 287 7 0.0682981 150 7 0.072368 335 7 0.053290 222 7 0.044983 420 7 0.09166667 140 7 0.085850 148 6 0.065612 404 7 0.0261551 268 7 0.040943 417 7 0.142857 33 2 0.032767 105 7 0.268615 195 7 0.059636 163 7 0.046703 91 7 0.0525094 383 7 0.064861 200 7 0.042093 171 7 0.192557 315 7 0.044716 486 7 0.050673 442 7 0.155343 425 7 0.021435 188 7 0.0059524 112 7 0.000000 492 7 0.111111 35 2 0.009741 341 7 0.0000000 345 7 0.126782 497 7 0.102768 320 7 0.021036 261 7 0.054384 331 7 0.067754 408 7 0.064552 0.0577997 0.0860331 0.0480409 0.043763 0.159561 0.073456 0.062776 0.0732287 0.0352238 0.122159 0.0801138 0.009978 0.066148 0.0494279 0.1089062 0.092257 0.066145 0.0229516 0.050420 0.127083 0.030106 0.163161 0.060394 0.045971 0.0522957 0.060383 0.050207 0.074881 0.0524514 0.0594003 0.158520 0.0235652 0.0096230 0.00000000 0.0854362 0.012717 0.0000000 0.1189747 0.0981102 0.0196876 0.058793 0.067914 7 0.066678 0.071785 -0.00599844 7 0.069041 0.083172 -0.0141313 0.976437 5.1593e-01 insignificant 1 1.0000000 insignificant 0.8489936 0.5482855 insignificant 1 1.00000 insignificant -0.01723392 0.5057007 insignificant 1 insignificant 0.066678 0.009914 0.0557378 7 0.069041 0.006656 0.0623848 1.6517e-06 1.0000e+00 weaklyHypermeth 3.7538e-05 1.0000e+00 weaklyHypermeth 6.4161e-07 1.0000e+00 weaklyHypermeth 3.3769e-05 1.0000e+00 weaklyHypermeth 0.0541704 3.0436e-02 weaklyHypermeth 6.6165e-01 insignificant 0.066512 0.080903 -0.0092690 7 0.061004 0.072890 -0.0118857 5.3821e-01 5.0549e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 5.2431e-01 1.3987e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0043320 0.85233608 insignificant 1.00000 insignificant 0.071785 0.009914 0.0588382 7 0.083172 0.006656 0.0765161 6.0772e-08 1.0000e+00 weaklyHypermeth 1.8416e-06 1.0000e+00 weaklyHypermeth 3.6652e-05 1.0000e+00 weaklyHypermeth 1.6660e-03 1.0000e+00 weaklyHypermeth 0.07140434 2.1943e-02 weaklyHypermeth 5.7746e-01 insignificant 0.071357 0.080903 -0.00320087 7 0.068569 0.072890 -0.0043213 6.2215e-01 1.5992e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.8529e-01 1.3776e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02156597 0.4642656 insignificant 1.00000 insignificant 0.0099272 0.080903 -0.0624715 7 0.007488 0.072890 -0.0654019 1.0000e+00 1.1098e-08 weaklyHypometh 1.0000e+00 5.2847e-07 weaklyHypometh 0.99999980 1.6276e-05 weaklyHypometh 1.000000 9.2370e-04 weaklyHypometh -0.049838 8.3406e-02 insignificant 1.000000 insignificant chr7 37737035 37738035 26496 ENSG00000178503 0.776793 332 7 0.821677 89 6 0.642405 108 7 0.948090 74 7 0.568398 63 6 0.774329 184 6 0.730534 107 7 0.856793 63 3 0.7486609 111 7 0.7543599 52 6 0.771677 149 7 0.7394106 74 6 0.741667 89 6 NA 0 0 0.744215 86 7 0.75121109 57 6 0.643878 49 7 0.749154 133 7 0.7796769 128 7 0.805514 230 7 0.777778 13 0 0.719649 65 6 0.768182 110 7 0.761905 29 3 0.869048 26 3 0.8022589 156 7 0.691100 45 5 0.809259 42 5 0.638828 54 5 0.684052 174 7 0.818043 118 6 0.771119 239 7 0.692878 82 6 0.6001082 83 6 0.655325 109 7 0.694139 66 6 0.791767 65 5 0.7055290 130 7 0.853046 198 7 0.848538 218 7 0.793839 178 7 0.822198 231 7 0.858588 196 7 0.792151 0.8257181 0.6841209 0.9496665 0.676779 0.768574 0.793279 0.835728 0.7114758 0.7604284 0.820027 0.7584927 0.769990 NA 0.7524030 0.7887108 0.786850 0.746484 0.7879335 0.813343 0.860509 0.814875 0.805026 0.818882 0.860922 0.8161232 0.701856 0.803990 0.733496 0.7578201 0.8914658 0.787759 0.6653441 0.6096514 0.66309040 0.7132112 0.768914 0.7442314 0.8700409 0.8760461 0.7749881 0.826887 0.877452 3 0.769054 0.790850 -0.01474354 6 0.760238 0.758770 0.0014677 0.709988 2.1612e-01 insignificant 1 1.0000000 insignificant 0.8836203 0.1972543 insignificant 1 1.00000 insignificant -0.00408719 0.8782013 insignificant 1 insignificant 0.769054 0.689720 0.0861100 6 0.760238 0.679806 0.0804326 2.0987e-04 9.9999e-01 weaklyHypermeth 3.5571e-03 1.0000e+00 weaklyHypermeth 3.7315e-03 9.9960e-01 weaklyHypermeth 7.6153e-02 1.0000e+00 weaklyHypermeth 0.0652236 6.5037e-02 insignificant 1.0000e+00 insignificant 0.769054 0.836435 -0.0699204 7 0.760238 0.836918 -0.0766801 9.9999e-01 1.4222e-03 weaklyHypometh 1.0000e+00 1.7777e-01 insignificant 9.9995e-01 2.3864e-03 weaklyHypometh 1.0000e+00 2.6515e-01 insignificant -0.0800605 0.00169715 weaklyHypometh 0.14143 insignificant 0.790850 0.689720 0.1022801 6 0.758770 0.679806 0.0789649 1.6119e-04 9.9545e-01 weaklyHypermeth 3.0999e-03 1.0000e+00 weaklyHypermeth 3.2433e-03 9.8923e-01 weaklyHypermeth 7.0506e-02 1.0000e+00 weaklyHypermeth 0.06931075 5.3903e-02 insignificant 9.8006e-01 insignificant 0.790850 0.836435 -0.05322130 6 0.758770 0.836918 -0.0781478 9.9405e-01 3.2549e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.7159e-01 1.1526e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.07597335 0.0040131 weaklyHypometh 0.44590 insignificant 0.6897196 0.836435 -0.1538104 6 0.679806 0.836918 -0.1571127 1.0000e+00 3.0523e-07 weaklyHypometh 1.0000e+00 1.1305e-05 weaklyHypometh 0.99999991 9.8141e-06 weaklyHypometh 1.000000 7.4435e-04 weaklyHypometh -0.145284 1.3788e-03 weaklyHypometh 0.062674 weaklyHypometh chr7 43757135 43758135 26630 C7orf44 ENSG00000106603 0.774038 61 5 0.609524 39 2 1.000000 9 0 0.792805 92 5 1.000000 1 0 0.762087 126 5 0.400000 5 0 0.671429 20 2 0.8000000 10 0 NA 0 0 0.690556 33 5 0.0000000 3 0 0.683333 18 0 NA 0 0 0.750000 8 0 0.00000000 2 0 0.700000 12 1 0.722540 58 5 0.7083333 34 3 0.733333 56 3 1.000000 5 0 0.966667 21 2 0.777143 31 5 1.000000 4 0 0.800000 18 2 0.8831781 84 5 0.875000 12 0 NA 0 0 0.500000 6 0 0.812987 72 3 0.688000 91 5 0.803064 113 5 0.900000 21 2 0.7800000 16 2 0.754412 55 3 0.000000 2 0 0.600000 5 0 0.6248804 79 5 0.762821 46 3 0.816176 69 5 0.797500 57 5 0.900000 28 3 0.790909 90 5 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0.701874 0.763676 -0.06863851 3 0.732945 0.794747 -0.0618024 0.970416 2.3442e-02 lowCoverage 1 1.0000000 lowCoverage 0.9902101 0.0587681 lowCoverage 1 1.00000 lowCoverage -0.17237841 0.0355053 lowCoverage 1 lowCoverage 0.701874 0.646067 0.0680438 3 0.732945 0.656750 0.0761953 1.3585e-03 5.5096e-01 lowCoverage 1.9977e-02 1.0000e+00 lowCoverage 1.9671e-01 8.5505e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0455612 7.6157e-01 lowCoverage 1.0000e+00 lowCoverage 0.701874 0.755172 -0.0751914 3 0.732945 0.805592 -0.0726470 9.9553e-01 2.3969e-02 lowCoverage 1.0000e+00 9.9870e-01 lowCoverage 9.8547e-01 4.8867e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.1580379 0.03095203 lowCoverage 0.77380 lowCoverage 0.763676 0.646067 0.1363100 3 0.794747 0.656750 0.1379977 8.2547e-05 9.9721e-01 lowCoverage 1.6665e-03 1.0000e+00 lowCoverage 4.2110e-02 9.9404e-01 lowCoverage 5.9310e-01 1.0000e+00 lowCoverage 0.21793966 1.6188e-01 lowCoverage 1.0000e+00 lowCoverage 0.763676 0.755172 -0.00622150 3 0.794747 0.805592 -0.0108446 8.0021e-01 2.8124e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.5396e-01 6.9786e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.01434047 0.7783932 lowCoverage 1.00000 lowCoverage 0.6460674 0.755172 -0.1463379 5 0.656750 0.805592 -0.1488423 9.9735e-01 4.7033e-04 weaklyHypometh 1.0000e+00 1.0938e-02 weaklyHypometh 0.99720461 3.9335e-02 weaklyHypometh 1.000000 6.5558e-01 insignificant -0.203599 1.8007e-01 lowCoverage 1.000000 lowCoverage chr7 43830435 43831435 26636 BLVRA ENSG00000106605 0.878095 103 5 0.742537 165 5 0.712217 77 5 0.701786 85 5 0.941830 86 5 0.787693 137 5 0.891026 50 5 0.868519 103 5 0.8647619 43 5 0.8698413 41 5 0.843025 242 5 0.8933333 25 3 0.858847 83 5 0.933333 30 5 0.942857 39 5 0.70476190 50 5 0.500000 8 0 0.897656 79 5 0.9636364 51 5 0.793619 130 5 0.769048 28 3 0.800000 13 0 0.860000 31 5 0.686111 39 5 0.733333 9 0 0.9140952 110 5 0.773333 32 3 0.855000 24 2 0.740184 60 4 0.886051 104 5 0.904139 127 5 0.784311 183 5 0.690577 73 5 0.6000000 15 0 0.724853 80 5 NA 0 0 0.666643 101 5 0.7316340 93 5 0.825885 48 5 0.950000 36 2 0.866667 45 5 0.905714 42 5 0.917778 48 5 0.890946 0.7393993 0.7121917 0.7142857 0.942557 0.794538 0.904388 0.874443 0.8729712 0.8564722 0.849899 0.9014085 0.871820 0.934272 0.9517103 0.7248491 0.464789 0.905195 0.9654289 0.806011 0.759893 0.809859 0.873239 0.697183 0.755869 0.9092421 0.791549 0.864789 0.758893 0.8928353 0.9073634 0.791045 0.6913326 0.6126761 0.72575601 NA 0.679641 0.7244960 0.8364546 0.9436620 0.8716745 0.907847 0.914554 0 0.842655 0.843421 0.00382626 5 0.840648 0.836870 0.0037783 0.519476 7.7002e-01 insignificant 1 1.0000000 insignificant 0.1871719 0.9388052 insignificant 1 1.00000 insignificant 0.02066826 0.5348600 lowCoverage 1 lowCoverage 0.842655 0.712707 0.1367670 5 0.840648 0.705682 0.1349668 6.4559e-06 1.0000e+00 weaklyHypermeth 1.3736e-04 1.0000e+00 weaklyHypermeth 1.1332e-04 1.0000e+00 weaklyHypermeth 3.6553e-03 1.0000e+00 weaklyHypermeth 0.1467274 8.0180e-04 lowCoverage 3.0838e-02 lowCoverage 0.842655 0.894977 -0.0365992 5 0.840648 0.886550 -0.0459021 8.7081e-01 5.0017e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 7.6481e-01 1.5704e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0637400 0.07147306 lowCoverage 1.00000 lowCoverage 0.843421 0.712707 0.1323486 5 0.836870 0.705682 0.1311885 2.2873e-04 9.9998e-01 weaklyHypermeth 4.2358e-03 1.0000e+00 weaklyHypermeth 2.7715e-03 9.9993e-01 weaklyHypermeth 6.2988e-02 1.0000e+00 weaklyHypermeth 0.12605911 2.4897e-03 lowCoverage 8.8918e-02 lowCoverage 0.843421 0.894977 -0.04143291 5 0.836870 0.886550 -0.0496803 9.2153e-01 1.0652e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.9028e-01 5.7630e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.08440830 0.0167310 lowCoverage 0.71611 lowCoverage 0.7127072 0.894977 -0.1769277 5 0.705682 0.886550 -0.1808689 9.9997e-01 6.0067e-05 weaklyHypometh 1.0000e+00 1.5402e-03 weaklyHypometh 0.99989077 1.0320e-03 weaklyHypometh 1.000000 3.4399e-02 weaklyHypometh -0.210467 1.8395e-04 lowCoverage 0.026278 lowCoverage chr7 43895635 43896635 26640 URGCP ENSG00000106608 0.800955 477 7 0.630729 60 3 0.669928 135 7 0.784111 226 7 0.683686 102 6 0.912808 90 3 0.696055 141 7 0.770089 42 3 0.7380952 27 2 0.7420635 46 4 0.723203 132 7 0.6666667 76 6 0.699825 132 7 0.691942 97 7 0.669841 73 7 0.69047619 29 2 0.722222 40 4 0.796062 336 9 0.9067669 62 3 0.664363 78 3 0.750000 25 1 0.964286 23 0 0.642758 240 8 0.841518 30 2 0.811905 66 6 0.7334957 64 3 0.623457 47 6 0.596296 23 2 0.764593 103 7 0.683333 33 3 0.893074 27 3 0.801136 48 1 0.604499 98 7 0.5535714 73 3 0.647186 36 2 0.333333 3 0 0.567445 58 4 0.8191106 68 3 0.737979 277 7 0.626931 347 7 0.739552 298 7 0.602651 364 7 0.796096 296 7 0.750235 0.6850490 0.6359679 0.7221633 0.725523 0.841340 0.753517 0.710084 0.7205882 0.7291667 0.689023 0.7096791 0.712855 0.656275 0.5643791 0.6458333 0.704164 0.710929 0.8227554 0.681135 0.926471 0.981618 0.728371 0.823179 0.769608 0.7906003 0.785948 0.727941 0.690977 0.7267157 0.8306595 0.741310 0.6696186 0.4705882 0.68953022 0.5845881 0.554985 0.8859587 0.7989743 0.7706658 0.7495481 0.724338 0.739798 0 0.733444 0.759945 -0.01298871 7 0.756790 0.691861 0.0649293 0.351940 3.8337e-01 insignificant 1 1.0000000 insignificant 0.8507717 0.0194376 weaklyHypometh 1 1.00000 insignificant -0.02582661 0.4876069 lowCoverage 1 lowCoverage 0.733444 0.708333 0.0451726 3 0.756790 0.612986 0.1438041 1.0034e-03 8.9367e-01 lowCoverage 1.5437e-02 1.0000e+00 lowCoverage 1.5517e-01 9.1683e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.1454702 7.3265e-02 lowCoverage 1.0000e+00 lowCoverage 0.733444 0.751580 -0.0297992 7 0.756790 0.673467 0.0833237 5.8307e-02 1.4557e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.6797e-01 1.1533e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0323527 0.45624435 insignificant 1.00000 insignificant 0.759945 0.708333 0.0690161 3 0.691861 0.612986 0.0788749 4.9336e-02 8.9771e-01 lowCoverage 5.6708e-01 1.0000e+00 lowCoverage 6.0981e-02 9.9143e-01 lowCoverage 8.0330e-01 1.0000e+00 lowCoverage 0.17129682 4.5708e-02 lowCoverage 8.4644e-01 lowCoverage 0.759945 0.751580 -0.01109242 7 0.691861 0.673467 0.0183945 7.6398e-01 4.4270e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.0182e-01 9.4879e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.05817930 0.2604137 lowCoverage 1.00000 lowCoverage 0.7083333 0.751580 -0.0871358 3 0.612986 0.673467 -0.0604804 9.8462e-01 4.7866e-02 lowCoverage 1.0000e+00 6.2982e-01 lowCoverage 0.99619467 2.8785e-01 lowCoverage 1.000000 1.0000e+00 lowCoverage -0.113118 1.6592e-01 lowCoverage 1.000000 lowCoverage chr7 44035535 44036535 26646 POLR2J3 ENSG00000168255 0.908511 468 6 0.835724 269 6 0.810332 160 6 0.927661 407 5 0.923898 75 6 0.924404 473 6 0.886492 160 6 0.949771 156 6 0.8678359 88 6 0.9234007 75 6 0.916358 267 6 0.8449472 93 6 0.910805 181 6 0.906774 165 5 0.903046 156 6 0.82989233 69 6 0.750000 4 0 0.895747 1304 6 0.9315461 562 6 0.954368 278 5 0.865271 113 5 0.926136 65 5 0.777715 224 5 0.923123 76 5 0.905556 52 5 0.9382052 202 6 0.763904 158 5 0.708123 52 4 0.776461 268 5 0.901586 247 6 0.938022 198 6 0.936890 259 6 0.666942 200 6 0.5245731 371 6 0.372913 268 5 0.333333 6 0 0.559178 108 6 0.7799257 200 6 0.827629 219 5 0.880556 579 5 0.923887 302 5 0.925590 794 5 0.898227 301 6 0.890810 0.8019204 0.7988008 0.9032074 0.899792 0.917448 0.868839 0.941182 0.8576743 0.9049757 0.918288 0.8264820 0.905185 0.915565 0.8756399 0.8612768 NA 0.904152 0.9348147 0.944920 0.926323 0.918567 0.897950 0.942712 0.879846 0.9307110 0.856722 0.846108 0.895195 0.9191414 0.9499874 0.922641 0.6471549 0.4839561 0.45445169 0.5159207 0.666643 0.7295580 0.9290496 0.9248342 0.9104476 0.909499 0.898233 5 0.900703 0.912180 -0.01402671 6 0.925684 0.786616 0.1390682 0.798008 3.7854e-01 insignificant 1 1.0000000 insignificant 0.9722778 0.1886933 insignificant 1 1.00000 insignificant 0.02665965 0.3325374 insignificant 1 insignificant 0.900703 0.578261 0.3198215 6 0.925684 0.448753 0.4769312 3.5039e-29 1.0000e+00 hypermethylated 5.8399e-27 1.0000e+00 hypermethylated 9.8396e-09 1.0000e+00 hypermethylated 1.0933e-06 1.0000e+00 hypermethylated 0.3505981 3.6004e-03 lowCoverage 1.1251e-01 lowCoverage 0.900684 0.914312 -0.0142080 5 0.915067 0.910099 0.0049681 7.7617e-01 4.4137e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8161e-01 3.8388e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0011022 0.96021567 insignificant 1.00000 insignificant 0.911703 0.578491 0.3349996 6 0.699214 0.472965 0.2262486 1.5734e-19 9.9999e-01 hypermethylated 1.4304e-17 1.0000e+00 hypermethylated 1.6280e-07 1.0000e+00 hypermethylated 1.3567e-05 1.0000e+00 hypermethylated 0.32393844 4.1585e-03 lowCoverage 1.3862e-01 lowCoverage 0.912611 0.914312 0.00084874 5 0.827561 0.910099 -0.0825385 6.5391e-01 4.7244e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.4454e-01 7.4113e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02776185 0.3700715 insignificant 1.00000 insignificant 0.5792683 0.914312 -0.3370353 5 0.512860 0.910099 -0.3972390 9.9991e-01 1.3748e-10 hypomethylated 1.0000e+00 9.1654e-09 hypomethylated 0.99999958 7.0500e-07 hypomethylated 1.000000 1.7625e-04 hypomethylated -0.351700 3.1921e-03 lowCoverage 0.118225 lowCoverage chr7 44042835 44043835 26647 POLR2J3 ENSG00000168255 0.597007 527 15 0.577916 529 15 0.567253 348 14 0.562968 544 13 0.660083 207 14 0.605828 823 14 0.629280 313 14 0.614005 344 13 0.6749620 288 13 0.6087385 258 12 0.657394 523 15 0.5006269 205 11 0.598866 374 13 0.917117 88 4 0.733939 353 12 0.58474226 195 11 0.679484 179 7 0.561505 501 14 0.6295532 467 13 0.647160 602 14 0.586683 148 10 0.564107 220 13 0.519991 321 14 0.589827 233 11 0.586979 167 12 0.6932413 492 14 0.672577 226 13 0.584576 150 12 0.584344 310 13 0.608941 593 14 0.592940 562 14 0.621828 887 16 0.480248 442 14 0.6281220 291 14 0.629646 482 13 0.657438 89 7 0.638974 284 13 0.6866697 487 14 0.658229 568 15 0.663553 623 13 0.672356 429 12 0.668428 542 13 0.630665 553 15 0.514046 0.5159909 0.5151457 0.5853342 0.568153 0.556144 0.545704 0.576243 0.5822138 0.5391199 0.578672 0.4750861 0.543382 0.593428 0.6500619 0.5688205 0.548252 0.562045 0.5727586 0.598990 0.571794 0.547696 0.518782 0.508705 0.601085 0.5875649 0.570450 0.570475 0.562295 0.5351228 0.5808257 0.613024 0.5333068 0.5815352 0.74400670 0.6793660 0.736045 0.7109802 0.6235901 0.6230010 0.5989183 0.619981 0.575151 8 0.574596 0.576236 -0.00069746 14 0.619199 0.603555 0.0156439 0.454342 8.7912e-01 insignificant 1 1.0000000 insignificant 0.1930884 0.8003010 insignificant 1 1.00000 insignificant 0.02991853 0.2069503 insignificant 1 insignificant 0.574596 0.659759 -0.0804426 14 0.619199 0.606006 0.0131931 1.5407e-04 2.8013e-10 weaklyHypometh 2.7030e-03 9.3377e-08 weaklyHypometh 4.5895e-02 6.1426e-04 weaklyHypometh 6.4640e-01 1.2285e-01 insignificant 0.0102385 7.7612e-01 insignificant 1.0000e+00 insignificant 0.574596 0.541068 -0.0446320 13 0.619199 0.654445 -0.0352460 9.1319e-01 2.5571e-05 weaklyHypometh 1.0000e+00 5.1142e-03 weaklyHypometh 9.5322e-01 4.3603e-05 weaklyHypometh 1.0000e+00 1.4534e-02 weaklyHypometh -0.0282249 0.18022208 insignificant 1.00000 insignificant 0.576236 0.659759 -0.0828883 14 0.603555 0.606006 -0.0024508 1.2638e-02 2.8068e-07 weaklyHypometh 1.6629e-01 9.3561e-05 weaklyHypometh 1.5519e-01 5.4008e-03 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.01968003 5.6048e-01 insignificant 1.0000e+00 insignificant 0.576236 0.541068 -0.04356045 13 0.603555 0.654445 -0.0508899 9.3837e-01 3.3705e-06 weaklyHypometh 1.0000e+00 1.1235e-03 weaklyHypometh 9.8728e-01 1.5510e-04 weaklyHypometh 1.0000e+00 5.1701e-02 weaklyHypometh -0.05814340 0.0016446 weaklyHypometh 0.32891 insignificant 0.6597590 0.541068 0.0430049 13 0.606006 0.654445 -0.0484391 6.0117e-02 1.8183e-03 inconclusive 1.0000e+00 3.6366e-02 inconclusive 0.08155145 2.5282e-02 inconclusive 1.000000 4.8506e-01 insignificant -0.038463 2.5421e-01 insignificant 1.000000 insignificant chr7 44118935 44119935 26649 AEBP1 ENSG00000106624 0.828336 691 16 0.584009 860 23 0.574103 821 23 0.828869 638 12 0.816918 473 19 0.847741 820 17 0.642364 677 22 0.805423 652 20 0.8549481 699 18 0.7949327 638 20 0.719297 645 22 0.6474536 646 21 0.722688 688 21 0.918841 391 8 0.815617 914 22 0.78655416 433 19 0.670564 281 18 0.856843 742 13 0.8160791 787 21 0.928872 505 16 0.811478 296 21 0.683349 275 11 0.804636 510 18 0.618991 346 16 0.836060 180 11 0.8418940 842 22 0.704873 433 18 0.682771 392 14 0.690730 932 20 0.873135 986 23 0.869234 713 20 0.796843 589 19 0.559080 726 22 0.5893723 475 22 0.662283 993 21 0.624543 83 6 0.602703 434 19 0.6963876 795 20 0.877450 744 16 0.817799 654 20 0.912212 522 11 0.922255 699 16 0.813855 592 15 0.916745 0.8215824 0.6715882 0.8487594 0.945271 0.923820 0.772113 0.902629 0.9012837 0.9123301 0.813622 0.8606177 0.905237 0.894799 0.9385810 0.8712783 0.844240 0.946660 0.9406935 0.938626 0.911990 0.868810 0.898707 0.884339 0.833999 0.9478755 0.864382 0.911525 0.894996 0.9390949 0.9488397 0.916798 0.7776190 0.6838286 0.87585204 0.8331009 0.793270 0.8446581 0.9469190 0.9297390 0.9246677 0.934501 0.941723 11 0.832474 0.876501 -0.04444875 20 0.713839 0.765096 -0.0512571 1.000000 6.1760e-07 weaklyHypometh 1 0.0006176 weaklyHypometh 0.9981617 0.0646719 insignificant 1 1.00000 insignificant 0.00518971 0.8797433 insignificant 1 insignificant 0.832462 0.756988 0.0664151 20 0.702832 0.601918 0.1009145 1.6404e-17 3.7680e-02 weaklyHypermeth 1.1717e-15 1.0000e+00 weaklyHypermeth 1.6447e-06 1.2737e-01 weaklyHypermeth 7.1508e-05 1.0000e+00 weaklyHypermeth 0.1506278 1.1756e-04 weaklyHypermeth 8.3649e-03 weaklyHypermeth 0.832462 0.900965 -0.0535043 15 0.702832 0.819286 -0.1164534 1.0000e+00 5.3381e-10 weaklyHypometh 1.0000e+00 2.6690e-07 weaklyHypometh 1.0000e+00 2.4027e-08 weaklyHypometh 1.0000e+00 1.2014e-05 weaklyHypometh -0.0956916 0.01103809 weaklyHypometh 0.50306 insignificant 0.877042 0.756988 0.1216207 20 0.794522 0.601918 0.1926046 1.0819e-16 9.9294e-01 weaklyHypermeth 6.7617e-15 1.0000e+00 weaklyHypermeth 5.6318e-05 9.5667e-01 weaklyHypermeth 2.4486e-03 1.0000e+00 weaklyHypermeth 0.14543808 3.8899e-04 weaklyHypermeth 1.9449e-02 weaklyHypermeth 0.877042 0.900965 -0.01988970 15 0.794522 0.819286 -0.0247633 9.9930e-01 1.8372e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 1.0000e+00 2.6707e-03 weaklyHypometh 1.0000e+00 5.3413e-01 insignificant -0.10088133 0.0108332 weaklyHypometh 0.67387 insignificant 0.7569880 0.900965 -0.1187696 16 0.601918 0.819286 -0.2173678 9.9967e-01 3.9394e-11 weaklyHypometh 1.0000e+00 3.5813e-09 weaklyHypometh 0.99999717 1.1024e-05 weaklyHypometh 1.000000 7.4435e-04 weaklyHypometh -0.246319 2.8445e-05 hypomethylated 0.005689 hypomethylated chr7 44153335 44154335 26650 MYL7 ENSG00000106631 0.818365 478 16 0.751144 435 16 0.835933 465 16 0.764148 298 16 0.759487 326 15 0.838826 518 16 0.844816 323 16 0.815171 418 16 0.8054075 305 16 0.8383752 370 16 0.840552 610 16 0.6795202 181 10 0.677994 426 16 0.870536 144 8 0.816792 381 16 0.87089884 101 8 0.601166 92 9 0.677155 292 12 0.7444595 362 16 0.714191 407 16 0.741240 212 16 0.397472 250 16 0.747758 370 16 0.679365 201 13 0.837624 188 13 0.7810761 644 16 0.833522 415 16 0.686739 105 10 0.812441 445 16 0.794173 625 16 0.701867 624 16 0.839575 636 16 0.670034 425 15 0.6745944 475 16 0.922224 384 9 0.580991 172 12 0.800321 237 14 0.7399779 795 16 0.615525 330 16 0.587545 443 16 0.510654 243 12 0.320080 362 12 0.526388 328 15 0.780822 0.7025338 0.7981758 0.7423905 0.700997 0.791606 0.818829 0.796061 0.7883716 0.8301492 0.819323 0.7037346 0.716206 0.773557 0.7738148 0.8292987 0.600588 0.703425 0.7002084 0.671369 0.735230 0.372051 0.796751 0.678482 0.809533 0.8115840 0.803927 0.711949 0.762750 0.7450903 0.7063308 0.846413 0.6358013 0.6390432 0.77387181 0.4702110 0.757764 0.6787907 0.5631136 0.6030703 0.3951870 0.367431 0.519966 10 0.779140 0.793001 -0.00336111 16 0.761399 0.690665 0.0707345 0.178943 4.1010e-01 insignificant 1 1.0000000 insignificant 0.2085258 0.6369117 insignificant 1 1.00000 insignificant 0.04050931 0.3147790 insignificant 1 insignificant 0.779624 0.737540 0.0840571 16 0.798688 0.720214 0.0784744 6.4627e-10 7.0991e-01 weaklyHypermeth 1.9008e-08 1.0000e+00 weaklyHypermeth 2.8009e-02 5.8795e-01 weaklyHypermeth 4.5176e-01 1.0000e+00 insignificant 0.0468901 3.9596e-01 insignificant 1.0000e+00 insignificant 0.779431 0.483001 0.2672372 12 0.772835 0.491821 0.2810140 1.2157e-37 9.9999e-01 hypermethylated 1.2157e-34 1.0000e+00 hypermethylated 2.6284e-18 9.9974e-01 hypermethylated 2.6284e-15 1.0000e+00 hypermethylated 0.2662085 0.00477115 weaklyHypermeth 0.28066 insignificant 0.793711 0.737540 0.0872971 16 0.746709 0.720214 0.0264956 1.9980e-06 4.1264e-01 weaklyHypermeth 5.1230e-05 1.0000e+00 weaklyHypermeth 1.3322e-01 4.7086e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00638076 9.1734e-01 insignificant 1.0000e+00 insignificant 0.793543 0.483001 0.27207070 12 0.705226 0.491821 0.2134045 2.4106e-20 1.0000e+00 hypermethylated 2.4106e-17 1.0000e+00 hypermethylated 2.3605e-10 9.9996e-01 hypermethylated 2.3605e-07 1.0000e+00 hypermethylated 0.22569920 0.0069762 weaklyHypermeth 0.58135 insignificant 0.7375402 0.483284 0.2185103 12 0.720214 0.520752 0.1994620 6.9403e-07 9.8457e-01 hypermethylated 3.4701e-04 1.0000e+00 hypermethylated 0.00011193 9.9892e-01 hypermethylated 0.056665 1.0000e+00 hypermethylated 0.219318 1.3377e-02 weaklyHypermeth 0.352033 insignificant chr7 44940135 44941135 26680 PURB ENSG00000146676 0.810823 48 4 0.833478 102 7 0.651603 72 7 0.896259 77 6 0.886735 31 3 0.858349 235 7 0.769955 55 7 0.759145 131 7 0.7534091 58 7 0.7993197 36 2 0.781233 176 7 0.8333333 11 0 0.789683 61 6 0.776190 42 6 0.705882 37 2 0.21875000 19 1 0.625000 5 0 0.716883 45 5 0.9214286 50 3 0.615148 138 7 0.693667 65 5 0.788025 55 5 0.771188 59 6 0.585754 81 6 0.642857 20 1 0.8473162 174 7 0.531746 162 6 0.554242 90 5 0.686310 54 4 0.884607 141 7 0.884319 109 7 0.757060 176 7 0.591028 109 6 0.3621212 24 1 0.490000 75 3 0.166667 10 0 0.522080 159 7 0.7809730 92 7 0.642857 35 3 0.704762 42 2 0.516291 42 3 0.865079 20 1 0.830524 61 6 0.903470 0.8339850 0.7706231 0.8995776 0.886982 0.869616 0.817396 0.856410 0.8549853 0.9554531 0.911272 0.8468153 0.883577 0.870968 0.8842505 0.5040323 0.833626 0.769306 0.8548387 0.829134 0.853626 0.880527 0.918948 0.807626 0.738426 0.8886454 0.717179 0.681355 0.761872 0.9022599 0.9120028 0.867329 0.6702017 0.3933366 0.68467742 0.3846216 0.616696 0.8543034 0.8383257 0.8387097 0.7238257 0.790918 0.900080 0 0.836249 0.766442 0.05168942 7 0.734334 0.688247 0.0460867 0.019600 9.2239e-01 weaklyHypermeth 1 1.0000000 insignificant 0.0304015 0.6492515 weaklyHypermeth 1 1.00000 insignificant 0.03120589 0.5304582 lowCoverage 1 lowCoverage 0.836249 0.667377 0.1719177 7 0.734334 0.572162 0.1621712 8.7625e-06 9.9998e-01 weaklyHypermeth 1.8255e-04 1.0000e+00 weaklyHypermeth 4.4424e-04 1.0000e+00 weaklyHypermeth 1.2693e-02 1.0000e+00 weaklyHypermeth 0.2646521 2.4496e-02 lowCoverage 5.5686e-01 lowCoverage 0.840253 0.855000 0.0104707 3 0.821381 0.705983 0.1153983 7.7758e-04 4.5489e-01 lowCoverage 4.8599e-02 1.0000e+00 lowCoverage 6.8638e-02 4.4415e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0382277 0.61277462 lowCoverage 1.00000 lowCoverage 0.766442 0.667377 0.1209643 7 0.688247 0.572162 0.1160845 9.1004e-04 9.9405e-01 weaklyHypermeth 1.4919e-02 1.0000e+00 weaklyHypermeth 1.3486e-03 9.9987e-01 weaklyHypermeth 3.7234e-02 1.0000e+00 weaklyHypermeth 0.23344620 3.9915e-02 lowCoverage 7.8264e-01 lowCoverage 0.768190 0.855000 -0.00727860 3 0.750854 0.705983 0.0448707 2.0124e-01 2.5212e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 3.0748e-01 4.5258e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.00702183 0.9259976 lowCoverage 1.00000 lowCoverage 0.6688034 0.855000 -0.1532202 3 0.653900 0.705983 -0.0520831 6.9399e-01 1.1186e-02 lowCoverage 1.0000e+00 1.8959e-01 lowCoverage 0.92242823 6.0934e-03 lowCoverage 1.000000 1.4508e-01 lowCoverage -0.226424 6.2482e-02 lowCoverage 1.000000 lowCoverage chr7 47260135 47261135 26735 ENSG00000214754 0.080848 530 26 0.036060 493 30 0.016618 600 33 0.090845 309 16 0.034395 447 30 0.204328 570 28 0.066007 621 30 0.011850 437 30 0.0076387 575 30 0.0087371 652 29 0.015557 615 34 0.0029657 594 33 0.013542 489 29 0.000000 105 8 0.030180 617 29 0.00089127 414 29 0.040200 348 15 0.072522 437 22 0.0053105 514 29 0.093684 511 26 0.028788 203 19 0.020604 244 19 0.084208 429 29 0.071225 283 21 0.092681 210 14 0.0040017 699 33 0.065654 444 22 0.063063 210 21 0.022147 520 26 0.056548 686 33 0.029167 703 30 0.074896 536 29 0.031874 470 29 0.0244238 603 32 0.000000 304 16 0.021522 169 10 0.079862 314 23 0.0134043 672 33 0.047362 757 31 0.050032 671 34 0.095118 294 15 0.089216 498 24 0.124404 442 23 0.011860 0.0056673 0.0077391 0.0154003 0.017233 0.047001 0.026251 0.012846 0.0087385 0.0089300 0.012021 0.0041798 0.012401 NA 0.0043707 0.0026808 0.011976 0.011708 0.0089443 0.031999 0.020537 0.028330 0.017089 0.016716 0.030656 0.0055835 0.024008 0.024355 0.013865 0.0012413 0.0049763 0.017261 0.0062766 0.0146562 0.00091392 0.0091434 0.036713 0.0095235 0.0060492 0.0067368 0.0153866 0.027852 0.029819 6 0.019542 0.015879 0.00209809 30 0.149455 0.137235 0.0122203 0.777951 8.7194e-01 insignificant 1 1.0000000 insignificant 0.7532981 0.8938712 insignificant 1 1.00000 insignificant -0.00947285 0.4985733 insignificant 1 insignificant 0.016382 0.018965 -0.0013967 27 0.076861 0.065166 0.0116952 7.6237e-01 2.2713e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.4315e-01 7.8514e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0130946 4.1740e-01 insignificant 1.0000e+00 insignificant 0.019449 0.025545 0.0031138 28 0.133151 0.099035 0.0341154 6.8397e-01 9.9909e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.9152e-01 9.9976e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0396175 0.05743653 insignificant 1.00000 insignificant 0.014366 0.018957 -0.0034646 26 0.036553 0.063495 -0.0269418 9.3575e-01 4.3329e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3255e-01 9.0934e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02256747 1.3495e-01 insignificant 1.0000e+00 insignificant 0.015510 0.025545 -0.00061783 26 0.126176 0.099035 0.0271407 9.1891e-01 9.9730e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8458e-01 9.9990e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03014463 0.1167519 insignificant 1.00000 insignificant 0.0189648 0.011120 0.0042695 25 0.065166 0.046641 0.0185246 9.9358e-01 9.9994e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.99960987 9.9999e-01 insignificant 1.000000 1.0000e+00 insignificant -0.052712 2.1057e-02 weaklyHypometh 0.489705 insignificant chr7 47334135 47335135 26738 ENSG00000214754 0.199477 322 9 0.149575 270 10 0.190150 221 10 0.229324 286 9 0.136667 94 6 0.253491 447 10 0.164930 234 10 0.177983 214 9 0.2248585 164 8 0.2615132 137 7 0.259317 217 10 0.2535007 118 8 0.148571 206 9 0.317308 32 1 0.157812 149 7 0.16227273 111 10 0.018590 118 7 0.264071 179 7 0.1760462 203 8 0.169176 409 10 0.238351 134 9 0.068783 186 7 0.209999 242 9 0.165670 157 10 0.217652 255 9 0.1509490 372 10 0.111335 264 8 0.155606 105 10 0.230341 233 9 0.161303 475 10 0.197919 404 10 0.283788 377 10 0.044322 192 9 0.0043706 230 9 0.005698 345 6 0.000000 145 7 0.031481 170 8 0.0074328 394 10 0.123482 570 10 0.110966 376 10 0.147265 239 9 0.131266 286 8 0.204880 367 10 0.142133 0.1231362 0.1502905 0.1243838 0.121829 0.197420 0.165324 0.130176 0.1656092 0.1633869 0.189171 0.1556053 0.117910 0.159220 0.1124170 0.2130196 0.138718 0.160428 0.1418504 0.153637 0.208806 0.071499 0.186075 0.128991 0.170877 0.1411578 0.165866 0.197459 0.198016 0.1511554 0.1698254 0.266471 0.0348580 0.0083674 0.00242039 0.0163132 0.051655 0.0090924 0.1079938 0.1051825 0.0968549 0.098336 0.160883 6 0.241505 0.301498 -0.02869965 10 0.157471 0.167892 -0.0104207 0.995311 1.3282e-02 weaklyHypometh 1 1.0000000 insignificant 0.9817323 0.0557454 insignificant 1 1.00000 insignificant 0.01309023 0.5645368 insignificant 1 insignificant 0.242358 0.032520 0.2491676 10 0.240804 0.010143 0.2306616 1.0159e-19 1.0000e+00 hypermethylated 7.8149e-18 1.0000e+00 hypermethylated 8.9710e-08 1.0000e+00 hypermethylated 6.7311e-06 1.0000e+00 hypermethylated 0.1801808 6.7952e-11 weaklyHypermeth 2.2651e-08 weaklyHypermeth 0.241212 0.124592 0.0596729 10 0.157471 0.112081 0.0453903 5.5060e-04 9.9958e-01 weaklyHypermeth 3.9329e-02 1.0000e+00 weaklyHypermeth 2.7747e-02 9.1306e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.0521598 0.03616978 weaklyHypermeth 0.85581 insignificant 0.301686 0.032542 0.3328086 10 0.183155 0.011065 0.1720898 2.3129e-16 1.0000e+00 hypermethylated 1.3605e-14 1.0000e+00 hypermethylated 2.1277e-08 1.0000e+00 hypermethylated 3.0057e-06 1.0000e+00 hypermethylated 0.16709052 2.7450e-07 weaklyHypermeth 5.4899e-05 weaklyHypermeth 0.301686 0.124728 0.08632621 10 0.183155 0.122270 0.0608847 2.0986e-05 9.9999e-01 weaklyHypermeth 1.9078e-03 1.0000e+00 weaklyHypermeth 6.5205e-03 9.9282e-01 weaklyHypermeth 4.5249e-01 1.0000e+00 insignificant 0.03906953 0.1243557 insignificant 1.00000 insignificant 0.0325424 0.124728 -0.1917896 10 0.011065 0.122270 -0.1112051 1.0000e+00 2.2424e-08 weaklyHypometh 1.0000e+00 1.0193e-06 weaklyHypometh 1.00000000 1.2050e-03 weaklyHypometh 1.000000 3.7657e-02 weaklyHypometh -0.128021 5.3295e-04 weaklyHypometh 0.036205 weaklyHypometh chr7 47360535 47361535 26739 ENSG00000214754 0.848894 244 7 0.820066 342 7 0.492208 104 7 0.844114 192 7 0.765476 92 7 0.885519 334 7 0.795139 39 3 0.906200 197 7 0.7493506 55 7 0.9098850 122 7 0.839721 314 7 0.7142857 23 0 0.940418 250 7 0.929076 100 7 0.911071 132 7 0.50000000 29 3 NA 0 0 0.935462 302 7 0.9329041 634 7 0.903035 283 7 0.650373 81 7 0.738698 106 7 0.939542 85 7 0.919481 88 7 0.788889 78 7 0.9230378 468 7 0.843668 227 7 0.878231 26 4 0.874272 599 7 0.912498 511 7 0.951018 591 7 0.880135 387 7 0.958296 203 7 0.9756625 339 7 0.875000 346 7 1.000000 4 0 0.694112 75 7 0.9688701 559 7 0.731303 183 7 0.890611 223 7 0.833855 208 7 0.681309 145 7 0.735156 158 7 0.855703 0.8253465 0.4618521 0.8547927 0.773474 0.873154 0.730373 0.899059 0.7726003 0.9112618 0.831254 0.7549900 0.945161 0.934643 0.9048396 0.4221557 NA 0.937182 0.9298383 0.901794 0.842162 0.846170 0.941832 0.934458 0.894145 0.9239608 0.816851 0.891816 0.872907 0.9099598 0.9449977 0.886239 0.9525498 0.9735021 1.00000000 0.9761688 0.900041 0.9683520 0.9364752 0.8946192 0.8282791 0.705877 0.822493 3 0.868532 0.900093 -0.03189792 7 0.886679 0.827820 0.0588599 0.935373 1.0375e-01 insignificant 1 1.0000000 insignificant 0.9683766 0.1274116 insignificant 1 1.00000 insignificant -0.03606640 0.3765064 insignificant 1 insignificant 0.868497 0.972405 -0.1023711 7 0.870491 0.973017 -0.1025263 1.0000e+00 5.4284e-06 weaklyHypometh 1.0000e+00 1.3571e-03 weaklyHypometh 1.0000e+00 6.7200e-09 weaklyHypometh 1.0000e+00 4.1812e-06 weaklyHypometh -0.0897362 1.4106e-01 insignificant 1.0000e+00 insignificant 0.868497 0.844639 0.0233072 7 0.870491 0.851767 0.0187242 3.2184e-01 8.4298e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.4846e-01 7.7094e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0478072 0.35122919 insignificant 1.00000 insignificant 0.899784 0.969856 -0.0722093 7 0.698803 0.756791 -0.0579884 1.0000e+00 2.3354e-06 weaklyHypometh 1.0000e+00 5.8385e-04 weaklyHypometh 1.0000e+00 4.3840e-04 weaklyHypometh 1.0000e+00 2.1920e-01 insignificant -0.05366985 3.4588e-01 insignificant 1.0000e+00 insignificant 0.899784 0.841876 0.05598516 7 0.698803 0.662485 0.0363174 1.7582e-02 9.9854e-01 weaklyHypermeth 7.6442e-01 1.0000e+00 insignificant 1.8086e-01 9.9618e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.08387361 0.1071488 insignificant 1.00000 insignificant 0.9698558 0.841876 0.1252978 7 0.756791 0.662485 0.0943059 6.6612e-06 1.0000e+00 weaklyHypermeth 2.2204e-03 1.0000e+00 weaklyHypermeth 0.00011333 1.0000e+00 weaklyHypermeth 0.056665 1.0000e+00 weaklyHypermeth 0.137543 4.9218e-02 weaklyHypermeth 0.878900 insignificant chr7 47386135 47387135 26743 ENSG00000214754 0.754451 174 7 0.456136 295 7 0.442887 204 7 0.699932 138 6 0.491865 141 7 0.748455 306 7 0.480303 215 7 0.642806 211 7 0.4874475 147 7 0.5841837 96 6 0.734249 402 7 0.5285714 78 7 0.388760 199 6 0.534824 103 6 0.575557 205 6 0.63308824 62 6 NA 0 0 0.337567 245 6 0.5480615 440 6 0.626234 255 7 0.606122 104 6 0.254930 118 6 0.752504 154 5 0.669719 172 6 0.565025 105 4 0.7162347 406 7 0.667742 194 6 0.489805 90 6 0.718783 387 6 0.722258 438 7 0.637742 519 7 0.810183 323 7 0.816092 166 7 0.5004988 215 6 0.360870 559 5 0.821429 26 4 0.299267 290 7 0.6631954 530 7 0.421875 290 7 0.453847 233 7 0.600730 150 7 0.195407 197 6 0.296856 163 7 0.716545 0.5119850 0.4828585 0.7141593 0.472224 0.761402 0.539813 0.692868 0.5963248 0.6389957 0.739589 0.5828140 0.495342 0.587860 0.6529201 0.7734732 NA 0.372913 0.5398884 0.658614 0.693017 0.280687 0.807006 0.650146 0.641889 0.6967328 0.591692 0.593678 0.708694 0.7230295 0.6595770 0.817766 0.8205979 0.4218917 0.41716374 0.7936267 0.332661 0.7164103 0.4267189 0.4391993 0.5912399 0.202060 0.317100 4 0.591931 0.674751 -0.08519740 7 0.572148 0.683772 -0.1116237 0.999839 5.1498e-05 weaklyHypometh 1 0.0171660 weaklyHypometh 0.9842914 0.0046345 weaklyHypometh 1 0.57931 insignificant -0.07133918 0.1753274 insignificant 1 insignificant 0.591931 0.466965 0.1065659 7 0.572148 0.455881 0.1162674 8.8935e-04 9.6758e-01 weaklyHypermeth 1.4117e-02 1.0000e+00 weaklyHypermeth 5.9170e-01 7.2956e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0139773 8.8917e-01 insignificant 1.0000e+00 insignificant 0.591931 0.393030 0.2020441 7 0.572148 0.402591 0.1695574 1.5600e-08 9.9929e-01 hypermethylated 1.9500e-06 1.0000e+00 hypermethylated 4.1672e-06 9.9968e-01 hypermethylated 8.3344e-04 1.0000e+00 hypermethylated 0.1691719 0.06918961 insignificant 1.00000 insignificant 0.674751 0.466965 0.1911681 7 0.683772 0.455881 0.2278911 2.8294e-06 9.9999e-01 weaklyHypermeth 7.0736e-05 1.0000e+00 weaklyHypermeth 1.6717e-01 9.3608e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.05736192 5.8872e-01 insignificant 1.0000e+00 insignificant 0.674751 0.393030 0.28917544 7 0.683772 0.402591 0.2811810 1.2833e-14 1.0000e+00 hypermethylated 2.5667e-12 1.0000e+00 hypermethylated 1.0706e-07 1.0000e+00 hypermethylated 5.3528e-05 1.0000e+00 hypermethylated 0.24051103 0.0204349 weaklyHypermeth 0.78596 insignificant 0.4669653 0.393030 0.0890861 7 0.455881 0.402591 0.0532900 1.0934e-01 8.2227e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.04430679 9.9897e-01 weaklyHypermeth 1.000000 1.0000e+00 insignificant 0.183149 1.4721e-01 insignificant 1.000000 insignificant chr7 47480935 47481935 26747 ENSG00000214754 0.741432 126 7 0.519169 150 7 0.402679 121 7 0.716991 55 6 0.682514 55 7 0.677873 150 7 0.551124 127 7 0.453276 85 7 0.4038561 103 7 0.7470155 70 7 0.755207 166 7 0.3923142 89 7 0.427028 173 7 NA 0 0 0.625181 124 7 0.60642103 74 7 0.297151 112 7 0.495094 58 7 0.3276230 98 7 0.572048 125 7 0.660688 95 6 0.265306 64 6 0.741153 164 7 0.741246 56 7 0.659864 35 3 0.5803564 95 7 0.682684 112 7 0.613946 62 5 0.673427 80 6 0.586287 176 7 0.573526 193 7 0.776754 172 7 0.299541 115 7 0.3041126 150 7 0.019048 83 4 0.279580 66 4 0.349165 88 7 0.5283261 141 7 0.701779 111 7 0.551821 121 7 0.686820 65 4 0.450997 116 7 0.752814 50 4 0.727215 0.4190557 0.3786310 0.6983333 0.651366 0.609826 0.522848 0.395129 0.3805467 0.6871018 0.723648 0.3906787 0.356952 NA 0.5610613 0.5591554 0.261219 0.461967 0.2552147 0.521497 0.619679 0.276751 0.724342 0.703215 0.606443 0.4873015 0.624403 0.560798 0.595292 0.5054577 0.5075836 0.695637 0.2236936 0.2095824 0.06948034 0.2436776 0.254874 0.3973765 0.6581887 0.5001549 0.6234839 0.370017 0.721503 3 0.523532 0.604294 -0.08641532 7 0.551309 0.641854 -0.0905451 0.999771 1.5130e-03 weaklyHypometh 1 0.2161471 insignificant 0.9969945 0.0029551 weaklyHypometh 1 0.57931 insignificant -0.08255060 0.1198240 insignificant 1 insignificant 0.523532 0.267496 0.2542280 7 0.551309 0.291745 0.2595640 1.0479e-10 9.9999e-01 hypermethylated 3.1755e-09 1.0000e+00 hypermethylated 2.4145e-07 9.9321e-01 hypermethylated 1.5091e-05 1.0000e+00 hypermethylated 0.2504237 1.0626e-02 weaklyHypermeth 2.8983e-01 insignificant 0.523532 0.542117 -0.0250528 7 0.551309 0.607769 -0.0564597 8.3062e-01 2.3958e-02 weaklyHypometh 1.0000e+00 9.9870e-01 insignificant 9.2198e-01 5.0034e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0817935 0.24772049 insignificant 1.00000 insignificant 0.604294 0.267496 0.3378614 7 0.641854 0.291745 0.3501091 8.7044e-17 1.0000e+00 hypermethylated 5.8030e-15 1.0000e+00 hypermethylated 2.4504e-08 9.9960e-01 hypermethylated 3.0057e-06 1.0000e+00 hypermethylated 0.33297431 2.2479e-03 weaklyHypermeth 8.3256e-02 weaklyHypermeth 0.604294 0.542117 0.05682005 7 0.641854 0.607769 0.0340854 1.3641e-01 5.6482e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.4712e-01 5.5430e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00075711 0.9913149 insignificant 1.00000 insignificant 0.2674961 0.542117 -0.3145698 7 0.291745 0.607769 -0.3160237 1.0000e+00 4.0450e-08 hypomethylated 1.0000e+00 1.6854e-06 hypomethylated 0.99998170 8.6576e-06 hypomethylated 1.000000 7.2146e-04 hypomethylated -0.332217 4.0959e-03 weaklyHypometh 0.146283 insignificant chr7 47568435 47569435 26753 TNS3 ENSG00000136205 0.787069 191 7 0.798597 105 3 0.955226 70 3 0.775487 219 7 0.794247 58 3 0.789628 236 7 0.892720 78 3 0.906377 93 3 0.8910394 77 3 0.9197861 83 3 0.917329 91 3 0.9607843 45 3 0.895892 116 3 0.960784 44 3 0.935091 116 3 1.00000000 39 3 0.794610 588 7 0.797408 225 7 0.8038622 133 7 0.811164 189 7 0.939394 28 3 0.899691 76 3 0.766631 123 7 0.941026 54 3 0.929495 64 3 0.8013205 175 7 0.860476 62 3 0.730963 90 3 0.952140 84 3 0.772326 209 7 0.742395 171 7 0.755115 240 7 0.960913 86 3 0.9152292 43 3 0.769167 118 6 0.696429 28 2 0.938030 82 3 0.8069087 190 7 0.801907 249 7 0.838095 214 7 0.822545 256 7 0.777401 185 7 0.743066 269 7 0.923538 0.7863881 0.9581557 0.9565044 0.827170 0.923031 0.838717 0.912919 0.8961219 0.9153255 0.912356 0.9526066 0.918867 0.952607 0.9487551 1.0000000 0.882833 0.944921 0.9351068 0.946007 0.926756 0.878774 0.924824 0.944769 0.905347 0.8525164 0.816881 0.978012 0.942159 0.9114523 0.9655617 0.945990 0.9708959 0.9273421 0.98795985 0.9496445 0.941789 0.9773001 0.9775113 1.0000000 0.9609463 0.933221 0.890067 3 0.843705 0.851017 0.00460188 7 0.805344 0.756065 0.0492793 0.062612 9.7331e-02 insignificant 1 1.0000000 insignificant 0.0327158 0.4218666 weaklyHypermeth 1 1.00000 insignificant 0.02844066 0.3586010 lowCoverage 1 lowCoverage 0.843481 0.844607 -0.0187532 7 0.777536 0.783843 -0.0063072 8.0032e-01 1.0302e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.2612e-01 2.1075e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0215756 6.5680e-01 lowCoverage 1.0000e+00 lowCoverage 0.843481 0.878943 -0.0276794 7 0.777536 0.795163 -0.0176266 8.7664e-01 3.8202e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.6875e-01 4.7339e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 0.0727521 0.00878854 lowCoverage 0.43943 lowCoverage 0.851420 0.844607 -0.0250807 7 0.768836 0.783843 -0.0150073 5.5526e-01 5.2610e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 5.6246e-01 1.1845e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00686504 8.9432e-01 lowCoverage 1.0000e+00 lowCoverage 0.851420 0.878943 -0.03366452 7 0.768836 0.795163 -0.0263268 6.9366e-01 1.8418e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.2043e-01 1.5785e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 0.04431149 0.1658442 lowCoverage 1.00000 lowCoverage 0.8446069 0.878943 -0.0042682 7 0.783843 0.795163 -0.0113194 8.0571e-01 5.0854e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.88739961 4.8026e-01 insignificant 1.000000 1.0000e+00 insignificant 0.051177 3.1007e-01 lowCoverage 1.000000 lowCoverage chr7 47591835 47592835 26755 TNS3 ENSG00000136205 0.806845 123 5 0.616314 94 5 0.686993 54 5 0.825968 120 5 0.826667 35 5 0.765727 171 5 0.634761 50 5 0.607567 90 5 0.8518519 55 5 0.7084416 49 5 0.775267 128 5 0.6800000 19 3 0.727619 66 5 0.620000 34 5 0.682269 60 5 0.52000000 17 1 1.000000 1 0 0.804134 142 5 0.8088954 96 5 0.732213 113 5 0.587963 19 2 0.837778 46 5 0.833168 57 5 0.736111 23 0 0.847778 55 5 0.8468715 98 5 0.785833 55 5 0.566667 11 0 0.697291 93 5 0.650935 111 5 0.774872 65 5 0.760075 141 5 0.569054 58 5 0.7119658 56 5 0.739939 97 5 0.266667 8 0 0.824074 57 5 0.8259141 93 5 0.755231 64 5 0.867159 124 5 0.843137 85 5 0.798889 80 5 0.830420 119 5 0.790625 0.6141889 0.6341259 0.8228335 0.840000 0.682904 0.670411 0.716291 0.8166667 0.6544805 0.745574 0.6100000 0.718095 0.621667 0.6589076 0.5800000 NA 0.777276 0.7840909 0.717205 0.693879 0.833333 0.802847 0.712500 0.825833 0.7874369 0.760417 0.575000 0.665579 0.7600992 0.7711538 0.739041 0.5874041 0.6720696 0.70926487 0.3500000 0.747222 0.8107992 0.7154221 0.8646552 0.8058824 0.776111 0.792832 0 0.735003 0.754522 -0.02159714 5 0.735346 0.741792 -0.0064464 0.883832 7.1047e-02 insignificant 1 1.0000000 insignificant 0.8909457 0.1389887 insignificant 1 1.00000 insignificant -0.00970181 0.7985179 lowCoverage 1 lowCoverage 0.735003 0.718157 0.0144200 5 0.735346 0.781904 -0.0465587 2.9208e-01 6.8478e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.5727e-01 8.9945e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0778077 4.2276e-01 lowCoverage 1.0000e+00 lowCoverage 0.735003 0.802966 -0.0627953 5 0.735346 0.837443 -0.1020970 9.9829e-01 1.0700e-02 weaklyHypometh 1.0000e+00 7.6431e-01 insignificant 9.9965e-01 9.6961e-03 weaklyHypometh 1.0000e+00 6.6548e-01 insignificant -0.0848906 0.01423172 lowCoverage 0.50306 lowCoverage 0.754522 0.718157 0.0349345 5 0.741792 0.781904 -0.0401123 5.3881e-02 7.0297e-01 insignificant 6.0540e-01 1.0000e+00 insignificant 5.0113e-02 9.5810e-01 insignificant 6.7720e-01 1.0000e+00 insignificant 0.08750947 3.7497e-01 lowCoverage 1.0000e+00 lowCoverage 0.754522 0.802966 -0.04553203 5 0.741792 0.837443 -0.0956506 8.7633e-01 6.9689e-03 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 8.4658e-01 3.9105e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.07518876 0.0459579 lowCoverage 1.00000 lowCoverage 0.7181572 0.802966 -0.0820795 5 0.781904 0.837443 -0.0555383 9.9108e-01 8.5531e-03 weaklyHypometh 1.0000e+00 1.5005e-01 insignificant 0.99847920 3.2233e-02 weaklyHypometh 1.000000 5.6550e-01 insignificant -0.162698 1.2187e-01 lowCoverage 1.000000 lowCoverage chr7 47617135 47618135 26758 TNS3 ENSG00000136205 0.919866 121 5 0.761221 228 7 0.831667 97 8 0.859524 215 8 0.841690 113 4 0.869115 289 8 0.868541 147 8 0.983796 102 5 0.5867209 48 2 0.9821429 33 4 0.776569 264 8 0.9090909 41 4 0.952381 35 3 0.733333 24 2 0.648120 38 4 1.00000000 16 1 0.650000 14 0 0.730894 73 4 0.7883598 107 7 0.890124 153 8 0.984127 48 4 1.000000 34 3 0.869595 128 8 0.738506 67 5 0.928725 238 6 0.9386624 260 5 0.892082 76 4 0.820833 40 4 0.894100 86 8 0.979706 172 8 0.789442 240 8 0.768207 195 8 0.850023 122 7 0.8643968 215 8 0.734162 457 7 0.946429 102 6 0.545222 146 7 0.8018482 259 8 0.900959 311 8 0.891352 331 8 0.926676 207 8 0.970861 85 4 0.854693 243 8 0.917493 0.7553406 0.8855655 0.9229464 0.899871 0.942622 0.873534 0.950781 0.9336022 0.9625000 0.952744 1.0000000 0.891667 0.835000 0.8936842 0.9958043 0.959095 0.902109 0.9758929 0.981507 0.987500 0.967388 0.966403 0.698277 0.843725 0.9657896 0.901365 0.851875 0.840315 0.9892287 0.9545966 0.944250 0.9011905 0.9881660 0.96258224 0.8842821 0.647794 0.9290064 0.9327684 0.9460748 0.9168894 0.976288 0.949052 1 0.901761 0.932364 -0.02479148 5 0.811144 0.826143 -0.0149989 0.985987 2.2021e-01 insignificant 1 1.0000000 insignificant 0.9600176 0.5271655 insignificant 1 1.00000 insignificant -0.05450769 0.1485511 insignificant 1 insignificant 0.901761 0.864719 0.0780340 5 0.811144 0.619628 0.1915155 3.4193e-07 4.6933e-01 weaklyHypermeth 8.3399e-06 1.0000e+00 weaklyHypermeth 9.4123e-02 6.9208e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0388110 5.5442e-01 insignificant 1.0000e+00 insignificant 0.905317 0.931181 -0.0152839 5 0.848372 0.869132 -0.0207597 9.4210e-01 2.4205e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.1869e-01 6.4294e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0797505 0.02492065 weaklyHypometh 0.67353 insignificant 0.932364 0.864719 0.1058653 8 0.826143 0.619628 0.2065145 2.8544e-05 9.1269e-01 weaklyHypermeth 6.2053e-04 1.0000e+00 weaklyHypermeth 1.3161e-01 9.0105e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.09331865 1.7699e-01 insignificant 1.0000e+00 insignificant 0.933502 0.931181 0.00826297 8 0.891371 0.869132 0.0222391 6.0266e-01 6.5676e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.5518e-01 9.2407e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02524281 0.4424548 insignificant 1.00000 insignificant 0.8659476 0.931181 -0.0783834 8 0.693554 0.869132 -0.1755783 9.7582e-01 8.0416e-04 weaklyHypometh 1.0000e+00 1.6917e-02 weaklyHypometh 0.96752226 2.5496e-01 insignificant 1.000000 1.0000e+00 insignificant -0.118561 9.4572e-02 insignificant 1.000000 insignificant chr7 47641135 47642135 26759 TNS3 ENSG00000136205 0.413240 157 7 0.210207 575 8 0.372276 273 8 0.139316 164 5 0.285046 90 5 0.484638 226 5 0.207413 181 5 0.315559 175 5 0.1997057 118 5 0.1585044 96 5 0.311642 263 5 0.2802198 57 5 0.108077 161 5 0.194444 59 5 0.220826 229 5 0.22097902 59 5 0.000000 2 0 0.302549 181 5 0.1494374 322 5 0.193722 187 5 0.625686 55 5 0.243462 80 5 0.347545 121 7 0.224242 112 5 0.425000 45 5 0.4225596 439 8 0.231304 148 5 0.163889 43 5 0.279236 277 5 0.197251 504 8 0.214065 429 8 0.319642 143 5 0.510872 283 8 0.5610294 126 5 0.811594 69 4 0.333333 8 0 0.512942 117 5 0.4554648 443 8 0.277661 226 5 0.343426 206 7 0.413114 132 5 0.388809 144 5 0.287206 168 7 0.384675 0.1810655 0.3366831 0.1517368 0.260125 0.228238 0.195495 0.305547 0.1762463 0.1404137 0.302392 0.2546524 0.098837 0.175461 0.1991278 0.2106336 0.089814 0.304332 0.1348512 0.104859 0.610676 0.213930 0.334159 0.197198 0.382538 0.3556152 0.213043 0.143286 0.269883 0.1755720 0.1727838 0.367770 0.4511126 0.5374016 NA 0.2609449 0.488096 0.2892582 0.2649444 0.2289689 0.1740906 0.314514 0.115370 5 0.248671 0.289232 -0.04018376 5 0.276124 0.285496 -0.0093717 0.901850 9.1495e-02 insignificant 1 1.0000000 insignificant 0.9108178 0.0209454 weaklyHypometh 1 1.00000 insignificant -0.06943343 0.1405280 insignificant 1 insignificant 0.248671 0.468451 -0.2028897 5 0.276124 0.501246 -0.2251218 9.9999e-01 1.4242e-12 hypomethylated 1.0000e+00 7.1212e-10 hypomethylated 9.9997e-01 1.3145e-05 hypomethylated 1.0000e+00 4.3818e-03 hypomethylated -0.2924825 4.5339e-03 weaklyHypometh 1.3739e-01 insignificant 0.248671 0.277397 -0.0139108 5 0.276124 0.323198 -0.0470738 4.9990e-01 1.0331e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.0282e-01 1.6028e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.1036532 0.01507366 weaklyHypometh 0.50306 insignificant 0.289232 0.468451 -0.1752536 7 0.285496 0.501246 -0.2157501 9.9994e-01 6.8716e-08 weaklyHypometh 1.0000e+00 3.4358e-05 weaklyHypometh 9.9990e-01 6.6817e-04 weaklyHypometh 1.0000e+00 2.2272e-01 insignificant -0.22304907 1.6324e-02 weaklyHypometh 4.6640e-01 insignificant 0.289232 0.277397 0.02853883 5 0.285496 0.323198 -0.0377022 2.7847e-01 3.2607e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.4898e-01 4.4705e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03421977 0.4724486 insignificant 1.00000 insignificant 0.4684512 0.277397 0.1897301 5 0.501246 0.323198 0.1780480 3.4880e-05 9.9980e-01 weaklyHypermeth 8.7201e-03 1.0000e+00 weaklyHypermeth 0.00259145 9.9971e-01 weaklyHypermeth 0.647863 1.0000e+00 insignificant 0.188829 3.2281e-02 weaklyHypermeth 0.658805 insignificant chr7 47675235 47676235 26763 C7orf65 ENSG00000221845 0.665761 42 3 0.585227 100 6 0.339815 41 4 0.767974 36 3 0.500000 12 0 0.617381 208 6 0.761905 18 1 0.736314 97 6 0.5705128 36 4 0.7054302 55 5 0.774250 161 6 0.4333333 24 4 0.787418 81 5 0.750000 8 0 0.649160 41 2 0.67857143 11 1 0.625000 8 0 0.619753 79 2 0.6670147 76 6 0.674567 147 6 0.703903 48 5 0.703175 60 5 0.767823 52 4 0.686642 57 4 0.530952 36 3 0.7069259 123 6 0.663272 81 6 0.444444 26 2 0.712893 93 5 0.576615 222 6 0.836396 168 6 0.696383 177 6 0.203137 89 4 0.2624722 106 6 0.436720 88 5 0.058333 50 2 0.209697 153 5 0.0860194 174 6 0.454167 27 3 0.719288 116 6 0.569084 52 4 0.638228 37 4 0.598207 101 6 0.756766 0.5726099 0.3169014 0.7873516 0.687875 0.740794 0.678068 0.760620 0.6459010 0.7263758 0.788636 0.5281690 0.776719 0.675931 0.7171855 0.6453747 0.723846 0.669275 0.7201552 0.693688 0.644004 0.783434 0.759317 0.648802 0.578974 0.7483634 0.689202 0.517997 0.748086 0.7085425 0.8035659 0.821546 0.2370106 0.3641443 0.33832944 0.1478873 0.225522 0.1136020 0.5765273 0.7923701 0.6919069 0.702325 0.684959 1 0.697112 0.761155 -0.04901971 6 0.570900 0.677426 -0.1065261 0.984319 7.5956e-02 insignificant 1 1.0000000 insignificant 0.6826313 0.5963762 insignificant 1 1.00000 insignificant -0.02364926 0.5617422 lowCoverage 1 lowCoverage 0.697112 0.224242 0.4865885 6 0.570900 0.176220 0.3946804 2.3136e-23 1.0000e+00 hypermethylated 2.3136e-21 1.0000e+00 hypermethylated 3.7991e-09 1.0000e+00 hypermethylated 4.7489e-07 1.0000e+00 hypermethylated 0.4360730 1.5069e-04 lowCoverage 8.3649e-03 lowCoverage 0.697112 0.645646 -0.0190220 6 0.570900 0.584804 -0.0139043 8.5513e-01 6.9682e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.6212e-01 7.6092e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0496746 0.35962094 lowCoverage 1.00000 lowCoverage 0.761155 0.224242 0.5565513 6 0.677426 0.176220 0.5012065 3.5591e-27 1.0000e+00 hypermethylated 5.0844e-25 1.0000e+00 hypermethylated 1.6728e-09 1.0000e+00 hypermethylated 2.7879e-07 1.0000e+00 hypermethylated 0.45972228 8.0788e-05 lowCoverage 6.2144e-03 lowCoverage 0.761155 0.645646 0.02941793 6 0.677426 0.584804 0.0926218 2.3085e-01 9.6202e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.3633e-01 7.7713e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.07332390 0.2039547 lowCoverage 1.00000 lowCoverage 0.2242424 0.645646 -0.4813543 6 0.176220 0.584804 -0.4085846 1.0000e+00 9.7959e-11 hypomethylated 1.0000e+00 6.9971e-09 hypomethylated 1.00000000 1.6627e-05 hypomethylated 1.000000 9.2370e-04 hypomethylated -0.386398 4.1520e-04 lowCoverage 0.034316 lowCoverage chr7 47675735 47676735 26764 C7orf65 ENSG00000221845 0.665761 42 3 0.585227 100 6 0.339815 41 4 0.767974 36 3 0.500000 12 0 0.617381 208 6 0.761905 18 1 0.736314 97 6 0.5705128 36 4 0.7054302 55 5 0.774250 161 6 0.4333333 24 4 0.787418 81 5 0.750000 8 0 0.649160 41 2 0.67857143 11 1 0.625000 8 0 0.619753 79 2 0.6670147 76 6 0.674567 147 6 0.703903 48 5 0.703175 60 5 0.767823 52 4 0.686642 57 4 0.530952 36 3 0.7069259 123 6 0.663272 81 6 0.444444 26 2 0.712893 93 5 0.576615 222 6 0.836396 168 6 0.696383 177 6 0.203137 89 4 0.2624722 106 6 0.436720 88 5 0.058333 50 2 0.209697 153 5 0.0860194 174 6 0.454167 27 3 0.719288 116 6 0.569084 52 4 0.638228 37 4 0.598207 101 6 0.756766 0.5726099 0.3169014 0.7873516 0.687875 0.740794 0.678068 0.760620 0.6459010 0.7263758 0.788636 0.5281690 0.776719 0.675931 0.7171855 0.6453747 0.723846 0.669275 0.7201552 0.693688 0.644004 0.783434 0.759317 0.648802 0.578974 0.7483634 0.689202 0.517997 0.748086 0.7085425 0.8035659 0.821546 0.2370106 0.3641443 0.33832944 0.1478873 0.225522 0.1136020 0.5765273 0.7923701 0.6919069 0.702325 0.684959 1 0.697112 0.761155 -0.04901971 6 0.570900 0.677426 -0.1065261 0.984319 7.5956e-02 insignificant 1 1.0000000 insignificant 0.6826313 0.5963762 insignificant 1 1.00000 insignificant -0.02364926 0.5617422 lowCoverage 1 lowCoverage 0.697112 0.224242 0.4865885 6 0.570900 0.176220 0.3946804 2.3136e-23 1.0000e+00 hypermethylated 2.3136e-21 1.0000e+00 hypermethylated 3.7991e-09 1.0000e+00 hypermethylated 4.7489e-07 1.0000e+00 hypermethylated 0.4360730 1.5069e-04 lowCoverage 8.3649e-03 lowCoverage 0.697112 0.645646 -0.0190220 6 0.570900 0.584804 -0.0139043 8.5513e-01 6.9682e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.6212e-01 7.6092e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0496746 0.35962094 lowCoverage 1.00000 lowCoverage 0.761155 0.224242 0.5565513 6 0.677426 0.176220 0.5012065 3.5591e-27 1.0000e+00 hypermethylated 5.0844e-25 1.0000e+00 hypermethylated 1.6728e-09 1.0000e+00 hypermethylated 2.7879e-07 1.0000e+00 hypermethylated 0.45972228 8.0788e-05 lowCoverage 6.2144e-03 lowCoverage 0.761155 0.645646 0.02941793 6 0.677426 0.584804 0.0926218 2.3085e-01 9.6202e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.3633e-01 7.7713e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.07332390 0.2039547 lowCoverage 1.00000 lowCoverage 0.2242424 0.645646 -0.4813543 6 0.176220 0.584804 -0.4085846 1.0000e+00 9.7959e-11 hypomethylated 1.0000e+00 6.9971e-09 hypomethylated 1.00000000 1.6627e-05 hypomethylated 1.000000 9.2370e-04 hypomethylated -0.386398 4.1520e-04 lowCoverage 0.034316 lowCoverage chr7 50817535 50818535 26811 GRB10 ENSG00000106070 0.373591 2253 56 0.234711 1121 52 0.387907 1340 57 0.440110 1393 38 0.233825 916 54 0.051609 1966 56 0.276871 2104 54 0.250623 943 55 0.2633324 1221 54 0.2429348 1149 54 0.296711 1765 54 0.1774930 1504 52 0.336391 1167 54 0.554449 114 9 0.290072 1505 54 0.15011187 1586 51 0.193972 1213 46 0.362576 1508 45 0.4361664 1107 55 0.411935 1574 52 0.298963 382 34 0.249680 676 33 0.157437 1369 56 0.247802 523 41 0.353867 655 33 0.2938796 1297 56 0.227697 695 45 0.339263 446 40 0.190225 812 52 0.201008 1310 52 0.320099 1072 52 0.438095 1586 57 0.299609 762 50 0.2728112 942 51 0.350844 812 42 0.312674 496 33 0.312375 456 39 0.2066374 1158 54 0.354362 2549 55 0.436480 1439 44 0.459646 1455 39 0.559821 1624 50 0.584471 1791 47 0.380138 0.2744624 0.3923865 0.4472557 0.225178 0.031042 0.311226 0.258869 0.2440310 0.2869804 0.304868 0.2217520 0.336506 NA 0.3571703 0.1698421 0.208236 0.433355 0.5241717 0.337753 0.245004 0.270144 0.177457 0.263259 0.357158 0.2147629 0.213181 0.369032 0.213643 0.2249991 0.2592359 0.443194 0.2802058 0.2557380 0.36907314 0.3881989 0.298332 0.2067590 0.3924710 0.3941104 0.4511560 0.510971 0.544740 25 0.295267 0.267720 0.02714062 54 0.265868 0.240692 0.0251759 0.029814 9.9858e-01 weaklyHypermeth 1 1.0000000 insignificant 0.0016527 0.9999665 weaklyHypermeth 1 1.00000 insignificant 0.02176842 0.5372389 insignificant 1 insignificant 0.295254 0.300173 -0.0098398 51 0.273592 0.270343 0.0032494 2.6440e-02 6.8458e-02 inconclusive 3.0391e-01 1.0000e+00 insignificant 8.7823e-02 9.4298e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0057780 8.6252e-01 insignificant 1.0000e+00 insignificant 0.295271 0.436893 -0.1432264 44 0.274921 0.421408 -0.1464863 1.0000e+00 1.9072e-43 weaklyHypometh 1.0000e+00 1.9072e-40 weaklyHypometh 1.0000e+00 4.2597e-30 weaklyHypometh 1.0000e+00 4.2597e-27 weaklyHypometh -0.1806865 0.00734184 weaklyHypometh 0.40788 insignificant 0.267993 0.300043 -0.0292314 51 0.253360 0.266786 -0.0134258 9.8939e-01 2.0983e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9962e-01 6.9847e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01599040 6.0783e-01 insignificant 1.0000e+00 insignificant 0.267970 0.436893 -0.17245144 44 0.263154 0.421408 -0.1582539 1.0000e+00 1.2020e-48 weaklyHypometh 1.0000e+00 1.2020e-45 weaklyHypometh 1.0000e+00 1.6784e-31 weaklyHypometh 1.0000e+00 1.6784e-28 weaklyHypometh -0.20245492 0.0045661 weaklyHypometh 0.45661 insignificant 0.3004329 0.436893 -0.1471343 41 0.285573 0.421408 -0.1358343 1.0000e+00 6.4156e-20 weaklyHypometh 1.0000e+00 3.2078e-17 weaklyHypometh 1.00000000 9.3378e-17 weaklyHypometh 1.000000 9.3378e-14 weaklyHypometh -0.186465 7.6551e-03 weaklyHypometh 0.239222 insignificant chr7 50854635 50855635 26814 GRB10 ENSG00000106070 0.788977 109 6 0.616678 117 6 0.448052 36 3 0.789163 74 3 0.602431 55 3 0.723810 94 7 0.730952 53 2 0.857407 81 7 0.7748299 50 6 0.8476190 34 6 0.736662 141 7 0.8571429 23 0 0.717113 77 7 0.732018 68 6 0.821429 39 6 0.46666667 19 2 0.900000 14 0 0.806087 91 6 0.8534799 56 6 0.657576 40 5 1.000000 16 1 1.000000 7 0 0.673779 52 2 0.913420 21 1 0.675325 64 5 0.7065629 74 7 0.755263 47 5 0.777778 16 0 0.790128 84 6 0.590476 46 6 0.825137 82 7 0.788095 39 6 0.701688 108 6 0.6378205 54 5 0.666253 81 8 0.250000 7 0 0.534524 49 6 0.7366162 80 7 0.632143 119 5 0.695166 96 6 0.827381 89 5 0.768000 65 5 0.741682 96 6 0.723784 0.7360200 0.4339295 0.9288864 0.629098 0.750988 0.810109 0.793716 0.7490242 0.8852459 0.730136 0.8729508 0.791179 0.697572 0.8217799 0.4590164 0.914165 0.831646 0.8602354 0.727769 1.000000 0.996625 0.766340 0.913562 0.696966 0.7699288 0.798965 0.754098 0.763766 0.8149883 0.8028283 0.821038 0.7023895 0.6418663 0.68201230 0.3216715 0.767760 0.8142697 0.6855972 0.7212287 0.7745902 0.775774 0.722010 0 0.757504 0.775547 -0.01851983 6 0.769992 0.696414 0.0735775 0.756552 4.7571e-01 insignificant 1 1.0000000 insignificant 0.9015193 0.2928688 insignificant 1 1.00000 insignificant -0.05492573 0.2471438 lowCoverage 1 lowCoverage 0.757504 0.693931 0.0490022 6 0.769992 0.582309 0.1876822 2.8413e-04 8.3473e-01 weaklyHypermeth 4.5827e-03 1.0000e+00 weaklyHypermeth 9.3254e-03 9.8422e-01 weaklyHypermeth 1.7595e-01 1.0000e+00 insignificant 0.1485878 1.0273e-01 lowCoverage 1.0000e+00 lowCoverage 0.756584 0.754839 0.0135445 5 0.745091 0.741359 0.0037323 4.6209e-01 4.8713e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.2968e-01 7.5751e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0035303 0.93645274 lowCoverage 1.00000 lowCoverage 0.775547 0.693931 0.0767860 6 0.696414 0.582309 0.1141047 6.0658e-03 9.6983e-01 weaklyHypermeth 8.5433e-02 1.0000e+00 weaklyHypermeth 6.6017e-03 9.9961e-01 weaklyHypermeth 1.2225e-01 1.0000e+00 insignificant 0.20351349 3.9276e-02 lowCoverage 7.8264e-01 lowCoverage 0.779006 0.754839 0.03750195 5 0.776342 0.741359 0.0349830 1.1515e-01 7.9828e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.8772e-02 9.7020e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.05845599 0.2589197 lowCoverage 1.00000 lowCoverage 0.7119565 0.754839 -0.0173600 5 0.732811 0.741359 -0.0085484 1.2919e-01 9.6378e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 0.55237357 2.6679e-01 insignificant 1.000000 1.0000e+00 insignificant -0.145057 1.1450e-01 insignificant 1.000000 insignificant chr7 51338435 51339435 26840 ENSG00000201133 0.752662 214 5 0.574074 20 2 0.777331 94 5 0.827635 60 3 0.875000 38 4 0.846313 275 5 0.738636 92 5 0.901429 114 5 0.7134503 74 3 0.4444444 20 2 0.877167 90 5 0.9139194 38 3 0.869048 36 4 0.777778 12 1 0.827937 56 5 0.66666667 15 1 0.936688 34 3 0.851466 180 5 0.6708333 50 4 0.825595 147 6 0.633333 16 2 0.597070 32 2 0.861213 41 3 0.827083 56 5 0.838492 62 5 0.7831169 153 6 0.692791 90 5 0.716667 36 2 0.668687 57 5 0.838238 83 6 0.813730 134 6 0.773794 250 5 0.524306 34 2 0.5949198 56 5 0.607317 114 4 0.533333 17 2 0.612062 88 6 0.6119919 136 6 0.923984 278 5 0.685646 45 2 0.647165 233 5 0.735062 209 5 0.851539 272 6 0.719286 0.6283643 0.6204241 0.6709212 0.671875 0.663267 0.763494 0.788318 0.6858553 0.6562500 0.780156 0.7072140 0.866071 0.687500 0.5421429 0.7108198 0.708588 0.763145 0.7127604 0.798339 0.812500 0.610577 0.731586 0.822266 0.651476 0.8659091 0.617001 0.872917 0.600379 0.7297390 0.7059598 0.742928 0.5323630 0.6839906 0.74801829 0.6093750 0.584604 0.5169008 0.7721432 0.7295969 0.6050980 0.764617 0.687058 0 0.862568 0.862376 -0.01503530 5 0.817380 0.756905 0.0604754 0.703080 1.6409e-01 insignificant 1 1.0000000 insignificant 0.6540052 0.3007867 insignificant 1 1.00000 insignificant 0.02971912 0.4361182 lowCoverage 1 lowCoverage 0.862485 0.629213 0.2146215 5 0.791291 0.589054 0.2022376 9.3237e-15 9.9661e-01 hypermethylated 4.2381e-13 1.0000e+00 hypermethylated 1.3877e-04 9.9551e-01 hypermethylated 4.2051e-03 1.0000e+00 hypermethylated 0.2027486 1.7305e-06 lowCoverage 2.1631e-04 lowCoverage 0.862568 0.900675 -0.0128845 5 0.817380 0.764525 0.0528549 4.0796e-01 5.5135e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.6928e-01 6.9072e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0147244 0.80964022 lowCoverage 1.00000 lowCoverage 0.865404 0.629213 0.2206894 5 0.803809 0.589054 0.2147555 2.3716e-11 9.9903e-01 hypermethylated 9.8819e-10 1.0000e+00 hypermethylated 2.2244e-04 9.9376e-01 hypermethylated 7.4146e-03 1.0000e+00 hypermethylated 0.17302953 3.6703e-05 lowCoverage 3.5831e-03 lowCoverage 0.862376 0.900675 0.00839722 5 0.756905 0.764525 -0.0076204 6.3120e-02 7.7709e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.3897e-02 8.2188e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01499476 0.8041728 lowCoverage 1.00000 lowCoverage 0.6292135 0.900579 -0.2235277 5 0.589054 0.730886 -0.1418319 2.4846e-01 1.5978e-05 hypomethylated 1.0000e+00 5.0671e-04 hypomethylated 0.77053615 2.2174e-02 weaklyHypometh 1.000000 4.6217e-01 insignificant -0.188024 1.9255e-02 lowCoverage 0.458449 lowCoverage chr7 55168235 55169235 26873 EGFR ENSG00000146648 0.878996 488 5 0.751377 337 7 0.743084 135 7 0.895476 250 5 0.726073 111 5 0.926247 528 6 0.727455 110 5 0.858521 143 7 0.6890444 97 5 0.8515114 131 5 0.865027 293 7 0.7255556 50 4 0.917104 108 5 0.879213 79 4 0.866183 200 5 0.77005348 41 4 1.000000 16 2 0.579054 781 5 0.9017856 386 5 0.893094 381 5 0.773469 87 5 0.728571 44 3 0.826664 192 5 0.781429 112 7 0.773047 84 4 0.8487478 338 7 0.808739 145 5 0.759848 65 5 0.888857 328 5 0.929056 301 7 0.816356 355 7 0.929506 453 5 0.567182 271 5 0.0905879 289 5 0.274683 223 2 0.000000 16 1 0.279165 245 7 0.4581648 453 5 0.934548 414 5 0.918555 406 5 0.877616 362 5 0.922528 704 5 0.844407 244 5 0.834527 0.7297633 0.8160962 0.8669416 0.883266 0.902828 0.838537 0.873987 0.7380932 0.8229965 0.907891 0.7605903 0.916109 0.840083 0.8627355 0.8860712 0.929528 0.610870 0.8818206 0.847487 0.930804 0.712612 0.910376 0.904797 0.668919 0.8986579 0.887935 0.801255 0.923245 0.9045396 0.8996831 0.914500 0.5885083 0.1277341 0.41860297 0.1808655 0.465750 0.4153864 0.9127267 0.9146991 0.8703491 0.922071 0.833999 4 0.801889 0.886046 -0.08207764 5 0.805650 0.858563 -0.0529122 0.980618 1.8051e-04 weaklyHypometh 1 0.0361029 weaklyHypometh 0.8503326 0.0073193 weaklyHypometh 1 0.66539 insignificant 0.00021842 0.9941840 insignificant 1 insignificant 0.801889 0.363880 0.4441472 5 0.805650 0.312301 0.4933497 1.3253e-30 1.0000e+00 hypermethylated 2.6507e-28 1.0000e+00 hypermethylated 3.9400e-13 1.0000e+00 hypermethylated 1.9700e-10 1.0000e+00 hypermethylated 0.5439456 1.1315e-03 lowCoverage 4.0367e-02 lowCoverage 0.801889 0.893427 -0.0852127 5 0.805650 0.914954 -0.1093035 1.0000e+00 3.0030e-04 weaklyHypometh 1.0000e+00 4.2900e-02 weaklyHypometh 9.9992e-01 1.0648e-02 weaklyHypometh 1.0000e+00 6.6548e-01 insignificant -0.0772881 0.01352751 weaklyHypometh 0.50306 insignificant 0.885383 0.363393 0.5167513 5 0.792909 0.273263 0.5196459 1.0485e-27 1.0000e+00 hypermethylated 2.0971e-25 1.0000e+00 hypermethylated 9.0699e-10 1.0000e+00 hypermethylated 2.7879e-07 1.0000e+00 hypermethylated 0.54372715 1.2488e-03 lowCoverage 4.9951e-02 lowCoverage 0.886046 0.893427 0.00142004 5 0.858563 0.914954 -0.0563913 8.0692e-01 1.9045e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.0967e-01 4.3539e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.07750652 0.0090944 weaklyHypometh 0.61449 insignificant 0.3638796 0.893427 -0.5147438 5 0.312301 0.914954 -0.6026533 1.0000e+00 5.4122e-17 hypomethylated 1.0000e+00 9.0203e-15 hypomethylated 1.00000000 2.1766e-08 hypomethylated 1.000000 7.2553e-06 hypomethylated -0.621234 6.8790e-04 lowCoverage 0.036205 lowCoverage chr7 55168335 55169335 26874 EGFR ENSG00000146648 0.878996 488 5 0.751377 337 7 0.743084 135 7 0.895476 250 5 0.726073 111 5 0.926247 528 6 0.727455 110 5 0.858521 143 7 0.6890444 97 5 0.8515114 131 5 0.865027 293 7 0.7255556 50 4 0.917104 108 5 0.879213 79 4 0.866183 200 5 0.77005348 41 4 1.000000 16 2 0.579054 781 5 0.9017856 386 5 0.893094 381 5 0.773469 87 5 0.728571 44 3 0.826664 192 5 0.781429 112 7 0.773047 84 4 0.8487478 338 7 0.808739 145 5 0.759848 65 5 0.888857 328 5 0.929056 301 7 0.816356 355 7 0.929506 453 5 0.567182 271 5 0.0905879 289 5 0.274683 223 2 0.000000 16 1 0.279165 245 7 0.4581648 453 5 0.934548 414 5 0.918555 406 5 0.877616 362 5 0.922528 704 5 0.844407 244 5 0.834527 0.7297633 0.8160962 0.8669416 0.883266 0.902828 0.838537 0.873987 0.7380932 0.8229965 0.907891 0.7605903 0.916109 0.840083 0.8627355 0.8860712 0.929528 0.610870 0.8818206 0.847487 0.930804 0.712612 0.910376 0.904797 0.668919 0.8986579 0.887935 0.801255 0.923245 0.9045396 0.8996831 0.914500 0.5885083 0.1277341 0.41860297 0.1808655 0.465750 0.4153864 0.9127267 0.9146991 0.8703491 0.922071 0.833999 4 0.801889 0.886046 -0.08207764 5 0.805650 0.858563 -0.0529122 0.980618 1.8051e-04 weaklyHypometh 1 0.0361029 weaklyHypometh 0.8503326 0.0073193 weaklyHypometh 1 0.66539 insignificant 0.00021842 0.9941840 insignificant 1 insignificant 0.801889 0.363880 0.4441472 5 0.805650 0.312301 0.4933497 1.3253e-30 1.0000e+00 hypermethylated 2.6507e-28 1.0000e+00 hypermethylated 3.9400e-13 1.0000e+00 hypermethylated 1.9700e-10 1.0000e+00 hypermethylated 0.5439456 1.1315e-03 lowCoverage 4.0367e-02 lowCoverage 0.801889 0.893427 -0.0852127 5 0.805650 0.914954 -0.1093035 1.0000e+00 3.0030e-04 weaklyHypometh 1.0000e+00 4.2900e-02 weaklyHypometh 9.9992e-01 1.0648e-02 weaklyHypometh 1.0000e+00 6.6548e-01 insignificant -0.0772881 0.01352751 weaklyHypometh 0.50306 insignificant 0.885383 0.363393 0.5167513 5 0.792909 0.273263 0.5196459 1.0485e-27 1.0000e+00 hypermethylated 2.0971e-25 1.0000e+00 hypermethylated 9.0699e-10 1.0000e+00 hypermethylated 2.7879e-07 1.0000e+00 hypermethylated 0.54372715 1.2488e-03 lowCoverage 4.9951e-02 lowCoverage 0.886046 0.893427 0.00142004 5 0.858563 0.914954 -0.0563913 8.0692e-01 1.9045e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.0967e-01 4.3539e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.07750652 0.0090944 weaklyHypometh 0.61449 insignificant 0.3638796 0.893427 -0.5147438 5 0.312301 0.914954 -0.6026533 1.0000e+00 5.4122e-17 hypomethylated 1.0000e+00 9.0203e-15 hypomethylated 1.00000000 2.1766e-08 hypomethylated 1.000000 7.2553e-06 hypomethylated -0.621234 6.8790e-04 lowCoverage 0.036205 lowCoverage chr7 55227635 55228635 26877 EGFR ENSG00000146648 0.884612 162 4 0.704533 289 6 0.768398 75 6 0.877903 159 4 0.752315 41 4 0.818857 194 6 0.620418 61 6 0.858120 148 6 0.7840278 77 6 0.8654762 50 3 0.877974 303 6 0.9305556 17 1 0.635338 160 6 0.765190 46 6 0.783009 57 4 0.80000000 5 0 0.600000 7 1 0.594614 238 5 0.8341787 152 6 0.762912 123 6 0.737201 79 6 0.781543 103 4 0.861201 81 4 0.828934 87 6 0.777778 92 6 0.7534247 292 6 0.806138 98 6 0.716667 13 1 0.855253 157 6 0.704704 330 6 0.807016 295 6 0.861243 168 6 0.820259 174 6 0.6715368 138 6 0.955224 224 6 0.710714 34 3 0.793678 96 6 0.8452677 349 6 0.816215 144 6 0.772655 154 4 0.721072 140 4 0.770192 78 4 0.642406 121 4 0.843585 0.6637514 0.7498210 0.8330456 0.695538 0.851099 0.579507 0.831597 0.7757874 0.8185227 0.883185 0.8996063 0.605766 0.784355 0.7651856 0.7039625 0.636846 0.586290 0.8705124 0.752379 0.811268 0.750999 0.858057 0.783041 0.759160 0.7755942 0.836907 0.711178 0.839580 0.8271527 0.8069002 0.901544 0.8047095 0.6592443 0.93230697 0.8502112 0.782146 0.8307985 0.7993890 0.8166138 0.7378910 0.735943 0.701314 3 0.770728 0.799889 -0.03143491 6 0.780675 0.805874 -0.0251990 0.863726 5.2447e-02 insignificant 1 1.0000000 insignificant 0.7540907 0.3128385 insignificant 1 1.00000 insignificant -0.01500368 0.5893708 lowCoverage 1 lowCoverage 0.770728 0.790148 -0.0039273 6 0.780675 0.822044 -0.0413690 2.9598e-01 9.2044e-05 weaklyHypometh 1.0000e+00 1.8409e-02 weaklyHypometh 9.0184e-01 2.2096e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0235250 6.2954e-01 lowCoverage 1.0000e+00 lowCoverage 0.770728 0.797488 -0.0132548 4 0.780675 0.755034 0.0256411 4.6058e-02 2.6766e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 4.5177e-02 3.6780e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0314134 0.41927220 lowCoverage 1.00000 lowCoverage 0.799889 0.790148 0.0024278 6 0.805874 0.822044 -0.0161699 4.4672e-01 3.2998e-03 inconclusive 1.0000e+00 6.5996e-01 insignificant 9.0045e-01 6.5805e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00852130 8.5305e-01 insignificant 1.0000e+00 insignificant 0.799889 0.797488 0.02000636 4 0.805874 0.755034 0.0508401 1.8964e-02 5.9871e-01 lowCoverage 7.9017e-01 1.0000e+00 lowCoverage 7.6194e-02 8.2187e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.04641709 0.2136347 lowCoverage 1.00000 lowCoverage 0.7901478 0.797488 -0.0492943 4 0.822044 0.755034 0.0670100 2.0765e-03 7.1936e-01 lowCoverage 2.9664e-01 1.0000e+00 lowCoverage 0.03515559 9.7954e-01 lowCoverage 1.000000 1.0000e+00 lowCoverage 0.054938 3.0881e-01 lowCoverage 1.000000 lowCoverage chr7 64290635 64291635 26904 INTS4L1 ENSG00000164669 0.775691 327 9 0.627228 121 9 0.669921 116 9 0.705703 173 9 0.771825 58 5 0.774313 311 9 0.648758 101 8 0.624343 98 5 0.5697771 82 8 0.7274405 109 7 0.790237 230 9 0.5973138 71 8 0.726734 173 9 0.944444 19 2 0.684351 128 9 0.73650794 72 8 0.731434 89 8 0.718035 172 9 0.7054331 196 9 0.774553 279 9 0.705688 55 5 0.796961 75 7 0.723484 174 9 0.602679 49 5 0.787749 65 9 0.6791214 164 9 0.720764 82 5 0.745040 75 5 0.608338 124 5 0.712252 196 9 0.788975 209 9 0.738401 344 9 0.690000 119 8 0.6556712 132 9 0.662954 175 9 0.690476 47 7 0.750397 66 8 0.7141260 184 9 0.838954 275 9 0.748142 242 9 0.769823 213 9 0.787907 280 9 0.769516 253 9 0.806470 0.6832746 0.7029738 0.7491718 0.783116 0.785518 0.705465 0.692657 0.6626876 0.7761527 0.810236 0.6119184 0.780111 NA 0.7278873 0.7711620 0.766424 0.751220 0.7392213 0.809221 0.740938 0.791412 0.787145 0.665574 0.795220 0.7376992 0.765506 0.745802 0.702581 0.7382235 0.8257673 0.784283 0.6864996 0.6837491 0.67629272 0.6648898 0.769776 0.7123594 0.8700014 0.7696937 0.8088784 0.829793 0.809787 5 0.758892 0.766129 0.00349268 9 0.730672 0.723128 0.0075432 0.454473 8.1101e-01 insignificant 1 1.0000000 insignificant 0.5812441 0.5013597 insignificant 1 1.00000 insignificant -0.00225227 0.9319106 insignificant 1 insignificant 0.758974 0.702628 0.0585151 9 0.757605 0.712320 0.0452840 9.0746e-04 9.9690e-01 weaklyHypermeth 1.4179e-02 1.0000e+00 weaklyHypermeth 5.5564e-02 8.8292e-01 insignificant 7.5087e-01 1.0000e+00 insignificant 0.0212648 3.7416e-01 insignificant 1.0000e+00 insignificant 0.758892 0.791766 -0.0515018 9 0.730672 0.783457 -0.0527850 9.9913e-01 1.1672e-02 weaklyHypometh 1.0000e+00 7.7813e-01 insignificant 9.9988e-01 3.0446e-03 weaklyHypometh 1.0000e+00 3.0446e-01 insignificant -0.0676662 0.01235998 weaklyHypometh 0.50306 insignificant 0.766129 0.702216 0.0557369 9 0.723128 0.680356 0.0427723 6.1997e-04 9.5006e-01 weaklyHypermeth 1.0689e-02 1.0000e+00 weaklyHypermeth 1.5155e-02 9.4422e-01 weaklyHypermeth 2.5686e-01 1.0000e+00 insignificant 0.02351703 3.2576e-01 insignificant 1.0000e+00 insignificant 0.766129 0.791766 -0.05372712 9 0.723128 0.783457 -0.0603282 9.9948e-01 2.7790e-03 weaklyHypometh 1.0000e+00 5.5581e-01 insignificant 9.9763e-01 6.0745e-03 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.06541398 0.0165382 weaklyHypometh 0.71611 insignificant 0.7022161 0.791766 -0.1109979 9 0.680356 0.783457 -0.1031005 9.9998e-01 1.0883e-05 weaklyHypometh 1.0000e+00 3.6277e-04 weaklyHypometh 0.99957773 1.2901e-04 weaklyHypometh 1.000000 5.1606e-03 weaklyHypometh -0.088931 2.3245e-03 weaklyHypometh 0.091481 weaklyHypometh chr7 66121035 66122035 26950 TYW1 ENSG00000198874 0.664996 165 8 0.474186 285 12 0.428890 179 12 0.786720 137 6 0.435440 166 12 0.565331 151 8 0.518341 208 12 0.538702 138 12 0.4284663 138 8 0.5236111 135 12 0.500557 327 12 0.5837963 124 9 0.567365 159 8 0.753401 45 6 0.590390 162 8 0.41613733 97 5 0.421769 83 3 0.787089 179 7 0.5515385 152 8 0.436090 135 8 0.380177 80 5 0.693878 14 1 0.518834 150 8 0.583425 78 7 0.637987 68 3 0.4417895 239 12 0.436162 99 9 0.697479 44 3 0.502360 180 8 0.559551 245 12 0.504894 206 12 0.487184 167 8 0.492331 200 12 0.4658036 138 8 0.447060 255 8 0.761905 15 0 0.553158 154 11 0.4718724 196 8 0.518648 175 12 0.590043 159 11 0.562296 200 8 0.810245 92 4 0.448683 154 6 0.808459 0.7339676 0.7875262 0.8266004 0.774776 0.819399 0.771322 0.793096 0.7636719 0.8309237 0.791822 0.9355087 0.776292 0.801324 0.8084886 0.7694753 0.838819 0.823501 0.8086747 0.776891 0.800517 0.737522 0.809520 0.804898 0.827301 0.7888049 0.787309 0.766346 0.765711 0.8361765 0.8317864 0.853598 0.7707056 0.7228784 0.84212961 0.9529648 0.648996 0.7866284 0.8165085 0.8461117 0.8329135 0.830152 0.735499 1 0.716272 0.703822 -0.00031528 8 0.523330 0.488193 0.0351364 0.441073 7.4136e-01 insignificant 1 1.0000000 insignificant 0.5531844 0.6787285 insignificant 1 1.00000 insignificant 0.01166428 0.7700458 insignificant 1 insignificant 0.716272 0.741127 0.0196090 8 0.523330 0.490640 0.0326900 9.8773e-02 8.9113e-03 inconclusive 1.0000e+00 9.9015e-01 insignificant 3.7142e-01 8.2658e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0166193 7.7076e-01 insignificant 1.0000e+00 insignificant 0.716272 0.660256 -0.0146804 7 0.523330 0.556278 -0.0329482 9.4177e-01 3.6139e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.8905e-01 2.0617e-02 weaklyHypometh 1.0000e+00 9.9109e-01 insignificant -0.0373423 0.59608774 insignificant 1.00000 insignificant 0.703822 0.741127 0.0207674 8 0.488193 0.490640 -0.0024464 2.1901e-01 8.2242e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 6.5576e-01 4.1516e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00495498 9.3201e-01 insignificant 1.0000e+00 insignificant 0.703822 0.660256 -0.01410458 7 0.488193 0.556278 -0.0680847 9.3348e-01 2.2506e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.7610e-01 4.6398e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.04900658 0.4957470 insignificant 1.00000 insignificant 0.7411273 0.660256 -0.0476821 7 0.490640 0.556278 -0.0656383 7.8109e-01 9.1379e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 0.91311303 1.9944e-01 insignificant 1.000000 1.0000e+00 insignificant -0.053962 5.0730e-01 insignificant 1.000000 insignificant chr7 66250835 66251835 26957 TYW1 ENSG00000198874 0.761797 234 8 0.782486 165 8 0.631614 88 8 0.768401 159 8 0.701607 89 8 0.756716 238 8 0.696429 103 6 0.768490 142 8 0.7793561 100 6 0.6821697 82 8 0.845418 244 8 0.7321429 37 3 0.783876 138 8 0.640000 13 2 0.713422 108 8 0.74080087 58 6 0.721154 52 4 0.780460 155 8 0.8433907 123 8 0.760120 199 8 0.851667 47 6 0.762821 79 6 0.748825 129 8 0.765152 65 6 0.734127 47 6 0.7616713 192 8 0.609028 57 5 0.712500 22 3 0.890152 103 8 0.732902 162 8 0.803174 179 8 0.812764 333 8 0.664192 163 8 0.7182869 122 8 0.725427 222 8 0.746280 68 8 0.816918 65 7 0.7530149 195 8 0.788122 242 8 0.681894 210 8 0.849806 158 8 0.855931 212 8 0.776016 192 8 0.771072 0.7171191 0.7325616 0.7998929 0.731278 0.772345 0.840034 0.781265 0.7592780 0.8138762 0.840289 0.6977148 0.829207 0.784592 0.7691309 0.8143096 0.732444 0.825190 0.8573457 0.789386 0.840034 0.824958 0.761161 0.851359 0.720866 0.8011841 0.687744 0.725589 0.887011 0.7745075 0.7928014 0.724410 0.6644395 0.7435256 0.75018426 0.7133585 0.823541 0.7865129 0.8568706 0.8418046 0.8634854 0.852066 0.818012 4 0.779581 0.779505 -0.00080665 8 0.741752 0.765755 -0.0240029 0.279468 1.4387e-01 insignificant 1 1.0000000 insignificant 0.6047365 0.1718235 insignificant 1 1.00000 insignificant -0.02090599 0.3983901 insignificant 1 insignificant 0.779553 0.740120 0.0316446 8 0.735034 0.721637 0.0133973 2.2439e-03 6.5712e-01 weaklyHypermeth 2.9525e-02 1.0000e+00 weaklyHypermeth 3.9167e-02 5.4761e-01 weaklyHypermeth 5.8458e-01 1.0000e+00 insignificant 0.0071392 7.7287e-01 insignificant 1.0000e+00 insignificant 0.780468 0.828063 -0.0507965 8 0.763729 0.747312 0.0164177 8.5920e-01 2.3795e-02 weaklyHypometh 1.0000e+00 9.9870e-01 insignificant 9.1108e-01 4.2573e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0458615 0.23049364 insignificant 1.00000 insignificant 0.780157 0.740120 0.0359915 8 0.789525 0.721637 0.0678880 8.3782e-03 9.0597e-01 weaklyHypermeth 1.1477e-01 1.0000e+00 insignificant 1.4146e-02 8.7000e-01 weaklyHypermeth 2.4389e-01 1.0000e+00 insignificant 0.02804515 3.5072e-01 insignificant 1.0000e+00 insignificant 0.778880 0.828063 -0.05024483 8 0.744460 0.747312 -0.0028519 9.9121e-01 4.4325e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9038e-01 9.1504e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02495556 0.5267324 insignificant 1.00000 insignificant 0.7403846 0.830508 -0.0885819 8 0.728508 0.819220 -0.0907119 9.9995e-01 1.6721e-05 weaklyHypometh 1.0000e+00 5.0671e-04 weaklyHypometh 0.99992328 4.0899e-04 weaklyHypometh 1.000000 1.5148e-02 weaklyHypometh -0.053001 2.0019e-01 insignificant 1.000000 insignificant chr7 66263935 66264935 26958 TYW1 ENSG00000198874 0.765824 289 8 0.636186 156 8 0.721316 133 8 0.827926 151 8 0.666147 81 8 0.701540 235 8 0.685488 98 5 0.642323 143 8 0.6378486 76 5 0.8003788 66 8 0.686062 264 8 0.7063095 60 8 0.777786 115 8 0.793651 30 4 0.841208 84 5 0.66287879 49 5 0.582386 55 5 0.833536 132 8 0.7545818 191 8 0.747040 224 8 0.729683 63 6 0.881237 89 8 0.797875 161 8 0.713162 65 7 0.859623 49 6 0.7416844 166 8 0.842212 83 6 0.506863 33 3 0.793651 120 6 0.748543 190 8 0.614714 160 8 0.755356 296 8 0.718444 98 8 0.7246618 155 8 0.771602 116 8 0.745170 105 8 0.802083 91 8 0.7266494 181 8 0.768184 264 8 0.806631 285 8 0.769736 196 8 0.809704 206 8 0.774731 199 8 0.806640 0.6500071 0.7022298 0.8584498 0.711398 0.741599 0.734871 0.787727 0.7830190 0.8281665 0.796124 0.6339313 0.804074 0.804591 0.8628316 0.6965508 0.635840 0.857598 0.8031080 0.793456 0.771948 0.863659 0.832211 0.733986 0.832510 0.7600578 0.865555 0.666344 0.816875 0.8101433 0.7713089 0.784731 0.7645590 0.7475138 0.78379999 0.7224026 0.797239 0.7863459 0.8150292 0.8352493 0.8209434 0.813302 0.827401 3 0.776216 0.804348 -0.02410375 8 0.711641 0.768429 -0.0567879 0.991571 1.2434e-01 insignificant 1 1.0000000 insignificant 0.9962527 0.0532148 insignificant 1 1.00000 insignificant -0.02519598 0.4759974 insignificant 1 insignificant 0.776426 0.778820 -0.0017794 8 0.735157 0.773360 -0.0382038 6.4812e-01 5.4520e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.1370e-01 3.1888e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0245809 2.6419e-01 insignificant 1.0000e+00 insignificant 0.776426 0.832174 -0.0525676 8 0.735157 0.808173 -0.0730164 9.8061e-01 1.3812e-02 weaklyHypometh 1.0000e+00 8.5718e-01 insignificant 9.2570e-01 4.3329e-03 weaklyHypometh 1.0000e+00 3.9390e-01 insignificant -0.0622764 0.00347860 weaklyHypometh 0.23191 insignificant 0.804082 0.778820 0.0256862 8 0.742699 0.773360 -0.0306616 2.3526e-01 9.4616e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.0929e-01 9.8962e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00061508 9.8544e-01 insignificant 1.0000e+00 insignificant 0.804082 0.832174 -0.02391686 8 0.742699 0.808173 -0.0654743 8.0209e-01 1.2121e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.1689e-01 1.3150e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03708043 0.2629761 insignificant 1.00000 insignificant 0.7788204 0.832174 -0.0497177 8 0.773360 0.808173 -0.0348126 9.8528e-01 2.9780e-02 weaklyHypometh 1.0000e+00 4.2543e-01 insignificant 0.92812345 5.4580e-02 insignificant 1.000000 8.2696e-01 insignificant -0.037696 4.7028e-02 weaklyHypometh 0.864952 insignificant chr7 71784435 71785435 27029 CALN1 ENSG00000183166 0.750571 150 6 0.7341009 163 6 0.6785714 84 6 0.750758 182 6 0.658532 74 6 0.719419 186 6 0.623271 86 6 0.707275 117 6 0.681904 96 6 0.7186586 97 6 0.702698 192 6 0.7467949 54 4 0.7286797 88 6 0.6984127 39 6 0.65262821 131 6 0.738095 58 4 0.602768 341 4 0.6889330 170 6 0.697917 96 6 0.741165 167 6 0.733822 63 6 0.733073 112 6 0.690571 115 6 0.7123377 62 6 0.789839 86 6 0.7414664 183 6 0.722342 68 6 0.6384259 76 6 0.734270 82 6 0.6632507 163 6 0.686263 162 6 0.7328020 266 6 0.6141745 128 6 0.712013 122 6 0.64039237 155 4 0.7063492 45 6 0.647980 92 6 0.6734007 167 6 0.6937225 150 6 0.7649411 202 6 0.6896454 158 6 0.771368 126 6 0.7785273 182 6 0.725230 0.6955670 0.6707317 0.7264930 0.6292586 0.691692 0.5966603 0.6722642 0.652319 0.6885670 0.680398 0.7183135 0.7043554 0.6476965 0.6299666 0.7009292 0.6116382 0.6609383 0.67428862 0.7131124 0.696437 0.7052752 0.659524 0.6896051 0.7606975 0.7397412 0.720471 0.5822042 0.714175 0.6251978 0.6448356 0.6993319 0.5571153 0.6618836 0.5900915 0.6815718 0.592942 0.6384577 0.6674905 0.7407664 0.6642489 0.7486450 0.7634555 6 0.6977830 0.7218359 -5.3818e-03 6 0.707514 0.713466 -0.00595183 4.3521e-01 3.2526e-01 insignificant 1.000000 1.0000e+00 insignificant 0.6534698 0.23035346 insignificant 1 1.00000 insignificant -0.01381430 0.3630756 insignificant 1 insignificant 0.6977830 0.5825106 0.0763346 6 0.707514 0.649895 0.0576189 5.7994e-06 8.2923e-01 weaklyHypermeth 8.9221e-05 1.0000e+00 weaklyHypermeth 1.1457e-02 3.4563e-01 weaklyHypermeth 1.3639e-01 1.0000e+00 insignificant 0.0353393 8.6778e-02 insignificant 9.2317e-01 insignificant 0.6977830 0.7555012 -0.03458592 6 0.707514 0.741034 -0.03351983 9.6385e-01 1.8606e-02 weaklyHypometh 1.0000e+00 4.6515e-01 insignificant 9.8686e-01 2.4874e-02 weaklyHypometh 1.0000e+00 7.1270e-01 insignificant -0.0385832 1.2789e-01 insignificant 1.000000 insignificant 0.7218359 0.5825106 0.08189429 6 0.713466 0.6498952 0.0635707 4.7009e-03 7.6769e-01 weaklyHypermeth 4.5201e-02 1.0000e+00 weaklyHypermeth 3.3881e-02 3.7613e-01 weaklyHypermeth 3.1665e-01 1.00000000 insignificant 0.0491536 2.9882e-02 weaklyHypermeth 3.9842e-01 insignificant 0.7218359 0.7555012 -2.8557e-02 6 0.713466 0.7410340 -0.02756800 8.2484e-01 8.2746e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 8.5134e-01 1.2681e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0247689 0.31472154 insignificant 1.000000 insignificant 0.5825106 0.7555012 -0.11482538 6 0.649895 0.741034 -0.0911387 9.8202e-01 2.0079e-04 weaklyHypometh 1.0000e+00 3.0753e-03 weaklyHypometh 6.5344e-01 1.8107e-02 weaklyHypometh 1.00000000 2.0119e-01 insignificant -0.0739225 1.8774e-02 weaklyHypometh 2.5032e-01 insignificant chr7 71888035 71889035 27033 CALN1 ENSG00000183166 0.941826 224 6 0.8682359 50 6 0.8069088 64 6 0.952441 81 6 0.972222 46 6 0.867063 91 6 0.932692 69 6 0.845865 64 6 0.758730 56 5 0.7695707 26 2 0.856431 170 6 0.7955193 69 6 0.8660173 66 5 NA 0 0 0.90780812 77 6 0.976190 31 4 0.808249 41 6 0.9398148 104 6 0.875101 68 6 0.894360 120 6 0.722222 14 0 0.851852 37 3 0.971209 138 6 0.9345238 44 4 0.972222 34 6 0.8424242 89 6 0.795004 58 5 0.8166667 35 2 0.868056 46 2 0.8882780 74 6 0.928571 26 4 0.9190237 159 5 0.7857906 52 5 1.000000 53 5 0.83333333 16 0 0.8690476 42 6 0.841898 62 6 0.8968182 36 4 0.9691615 180 6 0.9493874 177 6 0.8537137 150 6 0.959038 244 6 0.9494371 129 6 0.931267 0.8477356 0.8411023 0.9443149 0.9572650 0.876679 0.9252959 0.8192597 0.802259 0.6784188 0.844669 0.8038113 0.8554113 NA 0.9168956 0.9633700 0.8154882 0.9579772 0.89675836 0.8876910 0.717949 0.8105413 0.962829 0.9142247 0.9893162 0.8637529 0.767850 0.7615385 0.819444 0.9002879 0.9314493 0.9147512 0.7344510 1.0000000 0.8397703 0.8614164 0.886574 0.8634688 0.9793566 0.9457169 0.8495771 0.9542137 0.9444271 0 0.8820040 0.8978780 -1.3983e-02 6 0.883901 0.897408 -0.01350706 7.4515e-01 2.6720e-01 insignificant 1.000000 1.0000e+00 insignificant 0.9141692 0.11927865 insignificant 1 1.00000 insignificant -0.00030895 0.9908260 lowCoverage 1 lowCoverage 0.8820040 0.8659004 0.0153659 5 0.883901 0.864851 0.0190494 2.4482e-01 8.6776e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.2832e-01 5.7230e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0043808 8.9960e-01 lowCoverage 1.0000e+00 lowCoverage 0.8820040 0.9409091 -0.05866805 6 0.883901 0.940736 -0.05683551 9.9768e-01 2.5457e-03 weaklyHypometh 1.0000e+00 1.0405e-01 insignificant 9.9601e-01 1.2628e-02 weaklyHypometh 1.0000e+00 5.1327e-01 insignificant -0.0606188 4.4680e-02 weaklyHypometh 0.732453 insignificant 0.8978780 0.8659004 0.03257034 5 0.897408 0.8648514 0.0325565 2.6996e-01 9.6897e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.6622e-01 8.4531e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0046898 9.0141e-01 lowCoverage 1.0000e+00 lowCoverage 0.8978780 0.9409091 -4.3307e-02 6 0.897408 0.9407363 -0.04332845 9.6892e-01 5.4790e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 7.9427e-01 2.6477e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0603099 0.06824156 lowCoverage 1.000000 lowCoverage 0.8659004 0.9409091 -0.07442934 5 0.864851 0.940736 -0.0758849 9.9656e-01 2.0371e-02 weaklyHypometh 1.0000e+00 1.7411e-01 insignificant 9.5689e-01 3.8531e-01 insignificant 1.00000000 1.0000e+00 insignificant -0.0649996 1.1050e-01 lowCoverage 9.0570e-01 lowCoverage chr7 72068435 72069435 27037 NSUN5C ENSG00000106133 0.390797 343 12 0.3052080 521 12 0.3784358 563 12 0.313351 552 10 0.381102 456 12 0.399453 759 12 0.353469 640 12 0.395850 500 12 0.359588 456 12 0.3509039 561 12 0.417115 582 12 0.4284247 501 12 0.3420019 537 12 0.3743303 330 10 0.40275222 705 12 0.399916 421 12 0.310879 145 7 0.3808733 569 10 0.344269 843 12 0.391851 494 12 0.366273 280 12 0.395992 329 10 0.393546 422 12 0.3260172 281 12 0.443416 328 10 0.3698097 670 12 0.307539 640 12 0.4032643 233 12 0.363965 690 12 0.3945262 860 12 0.388152 783 12 0.4310693 501 12 0.3654776 512 12 0.303661 448 12 0.31950944 320 12 0.2621265 107 6 0.243136 428 13 0.3371188 685 12 0.4872409 581 10 0.4280255 497 12 0.2376490 415 10 0.275983 488 10 0.4146386 417 10 0.266101 0.1926263 0.2295683 0.2565607 0.2945560 0.259827 0.2702878 0.2707343 0.234888 0.2741185 0.310065 0.2920085 0.2799821 0.2937170 0.2835223 0.3109786 0.2606579 0.2489983 0.18723775 0.2320641 0.230880 0.2696717 0.258836 0.2574840 0.3516676 0.2325965 0.225916 0.2884081 0.240188 0.2153304 0.2627900 0.3622158 0.2122305 0.1774621 0.2164310 0.1268155 0.139435 0.2148164 0.3174706 0.2464218 0.1724248 0.2614020 0.2469289 10 0.2809697 0.2876849 -3.5356e-03 12 0.392008 0.426439 -0.03443083 8.5254e-01 2.6970e-01 insignificant 1.000000 1.0000e+00 insignificant 0.8043078 0.65945297 insignificant 1 1.00000 insignificant -0.01093551 0.4328145 insignificant 1 insignificant 0.2809697 0.2452000 0.0613015 12 0.392008 0.282697 0.1093114 4.7233e-09 8.9199e-01 weaklyHypermeth 1.0050e-07 1.0000e+00 weaklyHypermeth 5.2607e-08 9.9344e-01 weaklyHypermeth 1.8788e-06 1.0000e+00 weaklyHypermeth 0.0658569 1.4748e-02 weaklyHypermeth 2.2689e-01 insignificant 0.2808442 0.2314429 0.00509857 10 0.375394 0.420248 -0.04485330 2.7686e-01 1.6564e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.4213e-01 5.4729e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0023211 9.6387e-01 insignificant 1.000000 insignificant 0.2876849 0.2452000 0.06317809 12 0.426439 0.2826971 0.1437423 1.8930e-05 9.8967e-01 weaklyHypermeth 3.0532e-04 1.0000e+00 weaklyHypermeth 1.3092e-05 9.9939e-01 weaklyHypermeth 3.9672e-04 1.00000000 weaklyHypermeth 0.0767924 6.9449e-03 weaklyHypermeth 1.1771e-01 insignificant 0.2875915 0.2314429 6.1161e-03 10 0.395892 0.4202477 -0.02435619 3.7345e-01 2.7631e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.4840e-01 4.6530e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0132566 0.79871792 insignificant 1.000000 insignificant 0.2453963 0.2314429 -0.06894456 10 0.326189 0.420248 -0.0940588 9.9725e-01 1.5808e-05 weaklyHypometh 1.0000e+00 3.5928e-04 weaklyHypometh 9.9603e-01 9.6550e-05 weaklyHypometh 1.00000000 3.4482e-03 weaklyHypometh -0.0635358 2.6761e-01 insignificant 1.0000e+00 insignificant chr7 72074135 72075135 27038 NSUN5C ENSG00000106133 0.578402 306 7 0.5493333 122 5 0.6087543 160 5 0.465347 324 7 0.641795 75 5 0.547109 406 8 0.616970 140 5 0.575005 131 5 0.546024 158 5 0.3992023 135 5 0.567050 144 5 0.5997849 112 5 0.6608187 154 5 NA 0 0 0.57148718 141 5 0.402184 96 5 0.380653 128 5 0.6892312 570 7 0.765809 168 7 0.601730 294 8 0.576886 68 5 0.434854 152 5 0.551744 210 8 0.4089744 63 5 0.504406 121 5 0.6244476 272 7 0.340682 114 5 0.5680303 35 5 0.539568 120 5 0.6680756 306 7 0.751726 269 7 0.6767998 369 7 0.1464935 174 5 0.255169 118 5 0.04574243 148 7 0.2495167 134 7 0.324242 49 5 0.2622672 261 7 0.7254755 347 8 0.6979841 416 7 0.5920240 324 7 0.683573 340 9 0.5024096 421 7 0.446970 0.5388957 0.6048916 0.4259122 0.6359328 0.467231 0.6173824 0.5662952 0.537629 0.3877274 0.554921 0.5911178 0.6499480 NA 0.5555010 0.3967184 0.3718628 0.5302291 0.63384074 0.4569445 0.566398 0.4281802 0.472576 0.3971213 0.4920966 0.6261405 0.334559 0.5512479 0.537098 0.5570917 0.6843334 0.4897122 0.1396462 0.2440499 0.0683611 0.1603400 0.306981 0.2305910 0.6269988 0.6291917 0.6008075 0.5708092 0.5106481 5 0.5860786 0.5840877 -1.3600e-02 7 0.610464 0.671899 -0.06143440 8.3907e-01 4.9054e-01 insignificant 1.000000 1.0000e+00 insignificant 0.4320990 0.65920907 insignificant 1 1.00000 insignificant 0.01281826 0.7591723 insignificant 1 insignificant 0.5843357 0.2138009 0.3617936 7 0.600664 0.217689 0.3829747 4.9292e-26 1.0000e+00 hypermethylated 2.2405e-24 1.0000e+00 hypermethylated 5.7078e-13 1.0000e+00 hypermethylated 3.8052e-11 1.0000e+00 hypermethylated 0.3527626 5.3867e-05 hypermethylated 2.0718e-03 hypermethylated 0.5862344 0.6406926 -0.05476183 7 0.678294 0.682004 -0.00370965 9.3442e-01 6.2419e-02 insignificant 1.0000e+00 9.3163e-01 insignificant 9.4468e-01 4.9884e-02 weaklyHypometh 1.0000e+00 9.9768e-01 insignificant -0.0736255 1.6311e-01 insignificant 1.000000 insignificant 0.5822115 0.2138009 0.37754025 7 0.623121 0.2176889 0.4054320 1.8233e-21 1.0000e+00 hypermethylated 8.6826e-20 1.0000e+00 hypermethylated 3.8815e-12 1.0000e+00 hypermethylated 3.2346e-10 1.00000000 hypermethylated 0.3399444 3.8278e-05 hypermethylated 1.6643e-03 hypermethylated 0.5838894 0.6406926 -4.3798e-02 7 0.635443 0.6820035 -0.04656032 7.8468e-01 2.1642e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.6064e-01 8.3615e-02 insignificant 1.0000e+00 1.000000 insignificant -0.0864437 0.13850191 insignificant 1.000000 insignificant 0.2138009 0.6389653 -0.42012151 7 0.217689 0.654957 -0.4372680 1.0000e+00 3.5866e-20 hypomethylated 1.0000e+00 3.2606e-18 hypomethylated 1.0000e+00 2.4074e-10 hypomethylated 1.00000000 3.2747e-08 hypomethylated -0.4263881 4.6508e-05 hypomethylated 4.6508e-03 hypomethylated chr7 72187935 72188935 27041 ENSG00000205580 0.542834 101 7 0.4647079 216 7 0.5996599 75 6 0.628500 107 7 0.613358 68 4 0.529611 238 7 0.571939 79 7 0.624488 138 7 0.626082 84 7 0.6590639 54 6 0.568539 217 7 0.6023810 27 2 0.5556012 101 7 0.5989583 44 4 0.60004579 75 5 0.714286 19 1 0.362024 725 4 0.6639263 105 7 0.544774 108 4 0.647174 185 7 0.593979 59 6 0.600454 59 7 0.602041 84 7 0.6771886 90 6 0.750000 11 0 0.6327672 217 7 0.490269 78 4 0.4715488 49 5 0.686924 106 3 0.5544070 206 7 0.648341 191 7 0.6907410 256 7 0.5843748 152 7 0.588745 58 4 0.54031385 96 7 0.2040816 35 5 0.618757 107 6 0.5532443 208 7 0.7024937 88 7 0.6622470 151 7 0.5964573 172 7 0.778571 35 3 0.5718301 155 7 0.721629 0.6344284 0.6459396 0.7766067 0.7720315 0.699691 0.6176658 0.7200177 0.705048 0.6575932 0.681273 0.6755952 0.6350575 0.6436012 0.7052132 0.6726190 0.5356528 0.6969306 0.57821197 0.7501587 0.594805 0.7050028 0.722364 0.6761682 0.8400593 0.7202615 0.657803 0.5494183 0.704404 0.7399955 0.7782276 0.7235663 0.6812592 0.6734307 0.6845576 0.3571429 0.700109 0.7012489 0.8054541 0.7736140 0.7801446 0.8727679 0.6973834 1 0.5780911 0.6906117 -5.1034e-02 7 0.553536 0.584023 -0.03048679 9.9224e-01 9.6987e-04 weaklyHypometh 1.000000 3.2329e-01 insignificant 0.8562300 0.52560340 insignificant 1 1.00000 insignificant -0.03065731 0.3074753 insignificant 1 insignificant 0.5782214 0.6265244 0.0064177 7 0.560896 0.558764 0.0021321 2.5713e-01 4.9724e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.0068e-02 9.4351e-01 insignificant 5.9887e-01 1.0000e+00 insignificant 0.0709782 3.2160e-01 insignificant 1.0000e+00 insignificant 0.5781476 0.6539101 -0.05677323 7 0.560228 0.658348 -0.09811972 9.9492e-01 3.8354e-02 weaklyHypometh 1.0000e+00 7.2367e-01 insignificant 9.5659e-01 3.8837e-02 weaklyHypometh 1.0000e+00 9.0767e-01 insignificant -0.0764222 1.1265e-01 insignificant 1.000000 insignificant 0.6905444 0.6265244 0.05707876 7 0.625887 0.5587637 0.0671231 1.5081e-02 9.9216e-01 weaklyHypermeth 1.2673e-01 1.0000e+00 insignificant 6.9921e-02 9.4488e-01 insignificant 5.6846e-01 1.00000000 insignificant 0.1016355 1.7955e-01 insignificant 1.0000e+00 insignificant 0.6915954 0.6539101 -1.3144e-02 7 0.657026 0.6583480 -0.00132208 1.8959e-01 1.7592e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.9489e-01 1.0119e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0457649 0.33240159 insignificant 1.000000 insignificant 0.6265244 0.6527546 -0.06836256 7 0.558764 0.609541 -0.0507769 8.8210e-01 3.9306e-02 weaklyHypometh 1.0000e+00 3.0950e-01 insignificant 9.9054e-01 4.0368e-03 weaklyHypometh 1.00000000 7.2086e-02 weaklyHypometh -0.1474005 7.9767e-02 insignificant 7.4549e-01 insignificant chr7 72210935 72211935 27042 ENSG00000205580 0.834557 329 8 0.8750195 308 10 0.7300056 128 8 0.871238 313 6 0.930037 104 8 0.800450 472 9 0.859069 138 7 0.888575 165 8 0.835926 115 8 0.8721154 72 8 0.831855 379 9 0.8788889 66 7 0.8800000 116 5 0.7904040 33 4 0.86100470 126 8 0.694372 69 8 0.781250 29 0 0.6843479 273 5 0.888495 230 10 0.814619 326 8 0.777262 79 8 0.658120 52 4 0.838206 170 7 0.7898148 84 8 0.687328 220 6 0.8044034 250 9 0.702124 128 7 0.6215278 62 5 0.815698 151 9 0.8102598 279 9 0.896083 255 10 0.8143723 274 8 0.7651595 183 9 0.804166 193 9 0.84057281 183 9 0.8000000 45 6 0.920136 155 8 0.7870876 244 9 0.6663375 234 6 0.8751992 301 8 0.8511164 374 4 0.892157 224 4 0.9762258 330 6 0.927154 0.8786368 0.8713610 0.9459314 0.9684982 0.916903 0.8646783 0.8962032 0.962297 0.9873869 0.911927 0.9898693 0.9941176 0.9157166 0.9476141 0.9007283 0.9750842 0.8778027 0.97408245 0.8938249 0.859552 0.8736262 0.884033 0.7404085 0.8692616 0.9369386 0.811019 0.8671569 0.943655 0.9550538 0.9542112 0.9185098 0.8426447 0.9486395 0.9457841 0.9190435 0.930974 0.9092977 0.9213403 0.9359391 0.9457970 0.9560554 0.9541890 4 0.9137431 0.8935532 1.8829e-02 8 0.840883 0.782326 0.05855725 4.2649e-02 9.9968e-01 weaklyHypermeth 1.000000 1.0000e+00 insignificant 0.0048924 0.99980387 weaklyHypermeth 1 1.00000 insignificant 0.06217830 0.0378420 weaklyHypermeth 1 insignificant 0.9137110 0.8843470 0.0147309 9 0.835012 0.783969 0.0510431 2.2937e-01 9.9501e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.3274e-01 9.4917e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0105912 7.0283e-01 insignificant 1.0000e+00 insignificant 0.9202569 0.9616701 -0.01570342 6 0.906048 0.810614 0.09543395 1.5584e-02 2.6543e-02 weaklyHypometh 4.7225e-01 5.8352e-01 insignificant 6.6138e-01 4.3616e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0220957 6.9582e-01 insignificant 1.000000 insignificant 0.8942356 0.8843470 0.00021112 8 0.790587 0.7839692 0.0066182 7.9540e-01 7.5236e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6381e-01 1.6955e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0515871 1.3596e-01 insignificant 1.0000e+00 insignificant 0.9004571 0.9603554 -3.2200e-02 6 0.834439 0.6859039 0.14853530 2.0063e-01 7.0326e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4478e-01 1.6922e-02 weaklyHypometh 1.0000e+00 0.839272 insignificant -0.0842740 0.18622117 insignificant 1.000000 insignificant 0.8964467 0.9615912 -0.02906298 6 0.880890 0.791675 0.0892150 2.2020e-01 3.4828e-02 weaklyHypometh 1.0000e+00 2.7862e-01 insignificant 8.7684e-01 5.4243e-02 insignificant 1.00000000 5.0225e-01 insignificant -0.0326869 5.8081e-01 insignificant 1.0000e+00 insignificant chr7 72319135 72320135 27053 NCF1B ENSG00000182487 0.546854 167 6 0.4847683 88 6 0.4202899 138 6 0.560552 132 6 0.600694 67 6 0.520903 294 6 0.561388 94 6 0.452813 67 6 0.416506 89 6 0.5341433 117 6 0.587023 133 6 0.5535969 70 6 0.5509660 82 6 NA 0 0 0.50854701 116 6 0.552707 66 6 0.424916 53 6 0.5601829 135 6 0.617491 121 6 0.473279 256 6 0.579978 53 6 0.615741 50 6 0.567857 102 6 0.6309524 29 3 0.585648 44 6 0.5557209 162 6 0.487500 18 2 0.4791667 39 4 0.490079 83 6 0.4680860 196 6 0.562418 190 6 0.5424200 269 6 0.5126599 97 6 0.507504 82 6 0.47301587 108 6 0.5275132 54 6 0.495370 51 6 0.5184874 125 6 0.5594270 181 6 0.5782310 175 6 0.6074382 173 6 0.586236 165 6 0.5534641 134 6 0.553609 0.5033694 0.4322375 0.5736908 0.6111934 0.524801 0.5645087 0.4648749 0.440783 0.5470832 0.596479 0.5713696 0.5578984 NA 0.5277048 0.5696477 0.4409707 0.5647569 0.62567783 0.4870407 0.583747 0.6212737 0.580076 0.6257840 0.5895664 0.5658972 0.489267 0.4910569 0.500000 0.4871781 0.5765423 0.5456116 0.5182912 0.5100496 0.4765273 0.5375455 0.506098 0.5255298 0.5681922 0.5869928 0.6105926 0.5915886 0.5645538 6 0.5256018 0.5319838 -1.4202e-02 6 0.522570 0.542105 -0.01953526 8.7644e-01 8.5738e-02 insignificant 1.000000 1.0000e+00 insignificant 0.6877067 0.01835146 weaklyHypometh 1 1.00000 insignificant -0.02462431 0.2536001 insignificant 1 insignificant 0.5256018 0.4835590 0.0268600 6 0.522570 0.505500 0.0170695 6.5073e-02 8.3220e-01 insignificant 4.3382e-01 1.0000e+00 insignificant 6.1256e-02 7.9530e-01 insignificant 5.4209e-01 1.0000e+00 insignificant 0.0167480 3.0861e-01 insignificant 1.0000e+00 insignificant 0.5256018 0.5954106 -0.05466342 6 0.522570 0.580926 -0.05835684 9.8675e-01 3.1797e-03 weaklyHypometh 1.0000e+00 1.1498e-01 insignificant 9.7848e-01 4.6889e-03 weaklyHypometh 1.0000e+00 2.9306e-01 insignificant -0.0544528 4.6673e-03 weaklyHypometh 0.211830 insignificant 0.5319838 0.4835590 0.03930954 6 0.542105 0.5055001 0.0366047 1.8609e-02 9.3391e-01 weaklyHypermeth 1.5129e-01 1.0000e+00 insignificant 1.0732e-02 8.5064e-01 weaklyHypermeth 1.2626e-01 1.00000000 insignificant 0.0413723 3.2817e-02 weaklyHypermeth 4.3180e-01 insignificant 0.5319838 0.5954106 -3.3560e-02 6 0.542105 0.5809264 -0.03882157 9.8049e-01 9.2920e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.1882e-01 3.0872e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0298285 0.12748640 insignificant 1.000000 insignificant 0.4835590 0.5954106 -0.07196170 6 0.505500 0.580926 -0.0754263 9.8940e-01 2.4418e-04 weaklyHypometh 1.0000e+00 3.5909e-03 weaklyHypometh 9.9135e-01 9.6883e-04 weaklyHypometh 1.00000000 2.3067e-02 weaklyHypometh -0.0712008 4.1771e-04 weaklyHypometh 2.4262e-02 weaklyHypometh chr7 72457835 72458835 27054 ENSG00000202035 0.699545 436 11 0.6410828 367 11 0.5926772 180 9 0.694253 378 11 0.744831 211 13 0.723116 469 11 0.673122 319 13 0.715542 191 11 0.771117 137 7 0.6812290 95 8 0.690435 425 13 0.7790927 83 5 0.7408392 178 12 0.6957143 170 12 0.70059085 179 11 0.634127 86 8 0.734266 1030 6 0.6588785 361 11 0.746379 201 10 0.698691 370 8 0.676923 76 6 0.809524 12 0 0.721446 338 13 0.7604618 89 6 0.683231 84 8 0.7107819 321 11 0.735185 66 5 0.8383838 49 6 0.716220 241 13 0.6447847 373 11 0.802551 341 11 0.7585198 336 10 0.6720317 345 13 0.557719 297 10 0.70391789 268 13 0.5238095 11 0 0.587595 242 11 0.8217081 356 11 0.6326105 482 10 0.6992390 540 13 0.6217654 505 13 0.723298 316 8 0.7156926 484 13 0.796930 0.7859580 0.7437217 0.8029716 0.7941445 0.806571 0.7930384 0.8219158 0.801965 0.7997886 0.799714 0.7855362 0.7752749 0.8351332 0.8166412 0.7059083 0.8136139 0.8000563 0.86221340 0.8009165 0.862782 0.8643531 0.800311 0.8206598 0.7783555 0.8276722 0.877690 0.8931461 0.814666 0.7850853 0.8537396 0.8256663 0.7944743 0.7007875 0.8001679 0.6267562 0.748322 0.8316571 0.7769676 0.8233081 0.7964720 0.8091241 0.8247931 4 0.8431640 0.8184165 -7.3622e-03 11 0.663273 0.720259 -0.05698618 8.1152e-01 1.7891e-01 insignificant 1.000000 1.0000e+00 insignificant 0.9960761 0.01668763 weaklyHypometh 1 1.00000 insignificant -0.03739124 0.0734724 insignificant 1 insignificant 0.8431640 0.7919684 0.0440042 10 0.663273 0.683579 -0.0203059 1.8681e-02 9.9999e-01 weaklyHypermeth 1.5066e-01 1.0000e+00 insignificant 2.2719e-01 9.9948e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0563129 2.7304e-01 insignificant 1.0000e+00 insignificant 0.8430401 0.8177911 0.00270988 11 0.662546 0.636917 0.02562888 2.6255e-01 4.5946e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.0544e-01 4.2660e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0222554 3.8532e-01 insignificant 1.000000 insignificant 0.8184165 0.7919684 0.05248041 10 0.720259 0.6835788 0.0366803 4.6208e-05 9.9907e-01 weaklyHypermeth 7.0012e-04 1.0000e+00 weaklyHypermeth 4.4131e-03 9.9985e-01 weaklyHypermeth 5.9636e-02 1.00000000 weaklyHypermeth 0.0937041 9.6266e-02 insignificant 9.0133e-01 insignificant 0.8185745 0.8177911 1.2043e-02 12 0.707934 0.6369168 0.07101686 3.3835e-02 2.0165e-01 weaklyHypermeth 9.1217e-01 1.0000e+00 insignificant 2.1482e-02 6.8730e-01 weaklyHypermeth 8.6634e-01 1.000000 insignificant 0.0596466 0.05530352 insignificant 1.000000 insignificant 0.7914191 0.8177911 -0.04323274 10 0.615774 0.636917 -0.0211425 9.2769e-01 2.2364e-03 weaklyHypometh 1.0000e+00 2.6005e-02 weaklyHypometh 9.6992e-01 4.0289e-02 weaklyHypometh 1.00000000 3.8739e-01 insignificant -0.0340575 5.1681e-01 insignificant 1.0000e+00 insignificant chr7 72717035 72718035 27058 MLXIPL ENSG00000009950 0.661830 376 9 0.5612994 306 9 0.5501066 207 9 0.685520 233 9 0.628152 159 9 0.691837 584 9 0.619712 184 9 0.663844 172 9 0.611779 170 9 0.6878247 156 9 0.705246 439 9 0.6406271 184 9 0.6418611 207 9 0.7936508 62 5 0.66720795 246 9 0.638330 123 9 0.611473 884 8 0.6962199 236 9 0.611552 170 9 0.690753 423 9 0.663100 164 9 0.585103 170 9 0.640108 328 9 0.6004681 125 9 0.755724 88 8 0.7569808 332 9 0.654564 226 9 0.6222481 156 9 0.658857 164 9 0.6181169 262 9 0.638428 264 9 0.7102914 567 9 0.4368268 244 9 0.583858 213 8 0.51872811 255 8 0.5826849 105 7 0.601238 381 9 0.5822903 224 9 0.6684420 392 9 0.6772772 424 9 0.6402916 235 9 0.659310 320 8 0.7307322 295 9 0.710203 0.6004956 0.5768962 0.7353145 0.6626291 0.734829 0.6601087 0.6889338 0.640279 0.7361677 0.748699 0.7090042 0.6651906 0.7445572 0.6941819 0.6788808 0.6581950 0.7348975 0.64024760 0.7425141 0.719273 0.6470234 0.680230 0.6488004 0.7868546 0.8051849 0.711942 0.6924878 0.673500 0.6607031 0.6633066 0.7426583 0.4776740 0.6119135 0.5605478 0.6238168 0.665033 0.6044204 0.7492158 0.7501543 0.7062424 0.7305539 0.7860955 8 0.6909980 0.6820098 4.4019e-04 9 0.665780 0.665423 0.00035726 2.4757e-01 6.4816e-01 insignificant 1.000000 1.0000e+00 insignificant 0.3457945 0.27205910 insignificant 1 1.00000 insignificant -0.00572446 0.7794710 insignificant 1 insignificant 0.6909980 0.5604782 0.1113435 9 0.665780 0.561960 0.1038200 8.9144e-10 1.0000e+00 weaklyHypermeth 2.0260e-08 1.0000e+00 weaklyHypermeth 7.6422e-06 1.0000e+00 weaklyHypermeth 1.9595e-04 1.0000e+00 weaklyHypermeth 0.1020035 7.9460e-03 weaklyHypermeth 1.3940e-01 insignificant 0.6909980 0.7671068 -0.04350640 9 0.665780 0.678136 -0.01235559 3.0497e-02 5.7470e-03 weaklyHypometh 7.4383e-01 1.9157e-01 insignificant 2.1242e-01 2.0179e-04 weaklyHypometh 1.0000e+00 3.3543e-02 weaklyHypometh -0.0222694 2.7916e-01 insignificant 1.000000 insignificant 0.6820098 0.5604782 0.10962576 9 0.665423 0.5619602 0.1034628 3.9766e-06 1.0000e+00 weaklyHypermeth 7.2302e-05 1.0000e+00 weaklyHypermeth 2.7032e-05 9.9997e-01 weaklyHypermeth 7.1150e-04 1.00000000 weaklyHypermeth 0.1077280 6.0049e-03 weaklyHypermeth 1.0353e-01 insignificant 0.6820098 0.7671068 -4.2806e-02 9 0.665423 0.6781358 -0.01271286 3.7808e-01 4.3720e-02 weaklyHypometh 1.0000e+00 9.3021e-01 insignificant 6.8777e-01 5.4813e-02 insignificant 1.0000e+00 1.000000 insignificant -0.0165449 0.46883545 insignificant 1.000000 insignificant 0.5604782 0.7671068 -0.13754804 9 0.561960 0.678136 -0.1161756 9.9977e-01 6.8783e-05 weaklyHypometh 1.0000e+00 1.2738e-03 weaklyHypometh 9.9855e-01 1.8013e-04 weaklyHypometh 1.00000000 6.2115e-03 weaklyHypometh -0.1242729 3.1761e-03 weaklyHypometh 8.3638e-02 weaklyHypometh chr7 72758035 72759035 27060 WBSCR22 ENSG00000071462 0.765231 172 5 0.7089830 215 6 0.6494503 244 6 0.864799 141 6 0.815792 220 6 0.879485 409 6 0.776604 263 6 0.793470 223 6 0.758212 204 6 0.8272182 219 6 0.759400 309 6 0.7629234 106 6 0.6200846 217 6 0.7534271 110 6 0.71040985 227 6 0.829719 102 6 0.843750 25 2 0.5974504 204 5 0.783087 286 6 0.738580 339 6 0.849019 110 5 0.733333 26 2 0.823163 165 6 0.8188057 133 6 0.755556 36 3 0.7083528 254 6 0.518520 304 6 0.5477825 97 6 0.697128 215 6 0.8747780 242 6 0.762724 276 6 0.8591070 324 6 0.5086699 213 6 0.621215 217 6 0.54942670 277 4 0.4722222 24 1 0.541590 163 6 0.2280417 354 6 0.8261753 193 5 0.7073920 232 5 0.8310342 110 4 0.693718 119 4 0.5069354 150 6 0.833201 0.6859141 0.7651913 0.8289197 0.7983446 0.832172 0.7136592 0.7764948 0.720745 0.8312088 0.838641 0.7722617 0.5612854 0.8342573 0.8268893 0.8345345 0.8800417 0.5709432 0.72575709 0.8324687 0.812647 0.7502075 0.813722 0.7714207 0.6654545 0.8398382 0.623845 0.8303524 0.798283 0.8286700 0.7707832 0.7647008 0.6301594 0.7120103 0.6791289 0.5761218 0.680230 0.2585623 0.7235265 0.7215396 0.7661568 0.7211626 0.5764483 4 0.7737589 0.7771664 -7.0131e-03 6 0.794810 0.696008 0.09880141 6.7276e-01 8.5459e-01 insignificant 1.000000 1.0000e+00 insignificant 0.8573555 0.88715414 insignificant 1 1.00000 insignificant 0.01621479 0.6704067 insignificant 1 insignificant 0.7733396 0.5176282 0.2566157 6 0.739254 0.346548 0.3927059 1.4431e-10 1.0000e+00 hypermethylated 3.4360e-09 1.0000e+00 hypermethylated 2.7321e-04 1.0000e+00 hypermethylated 5.4642e-03 1.0000e+00 hypermethylated 0.2750430 3.2591e-03 lowCoverage 6.6512e-02 lowCoverage 0.7731788 0.7039801 0.05828157 5 0.687105 0.642173 0.04493205 1.3010e-01 9.1798e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.3586e-01 9.7054e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0488529 4.6464e-01 lowCoverage 1.000000 lowCoverage 0.7787489 0.5184591 0.28178199 6 0.718543 0.4158576 0.3026854 3.6999e-11 9.9919e-01 hypermethylated 1.2333e-09 1.0000e+00 hypermethylated 9.5915e-06 9.9996e-01 hypermethylated 2.9974e-04 1.00000000 hypermethylated 0.2588282 3.3348e-03 lowCoverage 6.6696e-02 lowCoverage 0.7771140 0.7048568 6.1112e-02 5 0.631715 0.7135252 -0.08181071 5.7441e-02 5.7498e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.3294e-01 7.9800e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0326381 0.64533271 lowCoverage 1.000000 lowCoverage 0.5180723 0.7057357 -0.21643772 5 0.350953 0.713525 -0.3625723 9.9783e-01 2.5421e-03 weaklyHypometh 1.0000e+00 2.9220e-02 weaklyHypometh 9.7571e-01 9.6341e-03 weaklyHypometh 1.00000000 1.3019e-01 insignificant -0.2261900 2.1605e-02 lowCoverage 2.7181e-01 lowCoverage chr7 72768235 72769235 27061 WBSCR22 ENSG00000071462 0.888944 307 8 0.7936035 250 8 0.6630290 256 8 0.934712 344 8 0.813469 126 8 0.899973 520 8 0.886039 142 8 0.933384 230 8 0.914166 341 8 0.8965678 264 8 0.877151 261 8 0.8556875 72 7 0.9073508 386 8 0.8872140 254 8 0.83536599 253 8 0.835859 81 6 0.866319 51 6 0.7001045 373 8 0.887510 129 7 0.919375 334 8 0.902083 57 5 0.857593 164 7 0.874963 244 8 0.9544892 75 5 0.894916 113 6 0.8914680 334 8 0.859293 149 8 0.8944444 124 8 0.920651 248 8 0.9417301 437 8 0.953926 371 8 0.9159145 386 8 0.7165030 300 8 0.651563 121 7 0.79485544 231 6 0.3585034 39 3 0.779045 236 8 0.6301211 396 8 0.9157668 254 8 0.8204532 242 8 0.8574794 210 7 0.853081 155 8 0.8895004 225 8 0.898044 0.7998909 0.6542730 0.9209298 0.7795757 0.885570 0.8797765 0.9339663 0.897609 0.8898395 0.873218 0.8398859 0.8987874 0.8939407 0.7917075 0.8934754 0.8833844 0.6865502 0.87258847 0.9020818 0.932674 0.8671205 0.867601 0.9470743 0.9137025 0.8785768 0.860846 0.9004812 0.918796 0.9463766 0.9359019 0.9039582 0.6990800 0.5036527 0.5579869 0.3865745 0.737005 0.4932208 0.9145385 0.8021313 0.8737728 0.8314284 0.8936263 7 0.8616807 0.9124629 -4.7451e-02 8 0.863860 0.913166 -0.04930648 9.9999e-01 2.5060e-04 weaklyHypometh 1.000000 1.2530e-01 insignificant 0.9911921 0.00849812 weaklyHypometh 1 1.00000 insignificant -0.04533138 0.0220352 weaklyHypometh 1 insignificant 0.8616807 0.7241119 0.1530790 8 0.863860 0.688543 0.1753163 8.9672e-12 9.7850e-01 weaklyHypermeth 2.2993e-10 1.0000e+00 weaklyHypermeth 8.0245e-06 9.9683e-01 weaklyHypermeth 2.0061e-04 1.0000e+00 weaklyHypermeth 0.2046928 2.4415e-02 weaklyHypermeth 3.3910e-01 insignificant 0.8616807 0.8701657 -0.01289612 8 0.863860 0.870922 -0.00706229 8.5187e-01 4.9583e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.8098e-01 7.4927e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0074649 7.4977e-01 insignificant 1.000000 insignificant 0.9124629 0.7241119 0.19694752 8 0.913166 0.6885434 0.2246227 7.8572e-12 9.9998e-01 weaklyHypermeth 2.8062e-10 1.0000e+00 weaklyHypermeth 2.3301e-06 9.9988e-01 weaklyHypermeth 8.9619e-05 1.00000000 weaklyHypermeth 0.2500242 1.1684e-02 weaklyHypermeth 1.7976e-01 insignificant 0.9124629 0.8701657 3.6523e-02 8 0.913166 0.8709219 0.04224419 1.1914e-02 9.9351e-01 weaklyHypermeth 3.8433e-01 1.0000e+00 insignificant 7.3373e-02 9.8207e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0378665 0.08617168 insignificant 1.000000 insignificant 0.7241119 0.8701657 -0.18887487 8 0.688543 0.870922 -0.1823785 9.9663e-01 4.2914e-04 weaklyHypometh 1.0000e+00 5.8786e-03 weaklyHypometh 9.9934e-01 5.9929e-03 weaklyHypometh 1.00000000 9.1222e-02 weaklyHypometh -0.2121577 2.1391e-02 weaklyHypometh 2.7181e-01 insignificant chr7 72874235 72875235 27065 CLDN3 ENSG00000165215 0.788692 303 7 0.7229213 468 7 0.4988277 244 7 0.648811 215 7 0.632117 179 9 0.838574 481 7 0.679080 302 7 0.559944 264 7 0.491570 205 7 0.7288700 202 8 0.776750 412 7 0.4330923 124 6 0.3878333 251 7 0.5068436 98 4 0.62759916 248 8 0.637497 116 7 0.463290 100 4 0.4847421 352 7 0.638090 534 7 0.586349 403 7 0.695570 114 7 0.425758 114 8 0.565406 303 7 0.5795173 173 8 0.647022 171 5 0.5951744 400 7 0.616790 222 7 0.5657491 85 5 0.736118 359 7 0.6808435 446 7 0.526641 489 7 0.8276211 456 7 0.0356974 440 7 0.137282 270 7 0.13235294 262 7 0.0119048 76 5 0.175318 390 8 0.0658228 520 8 0.5162995 374 7 0.5527305 384 7 0.6393248 245 7 0.583099 376 7 0.5435425 256 7 0.763670 0.6854125 0.5801784 0.7396479 0.7977920 0.842181 0.8715898 0.7212952 0.699338 0.7756418 0.789671 0.6794759 0.4007482 0.6981072 0.6626351 0.6371718 0.5792511 0.4852140 0.57329581 0.6780585 0.715744 0.4395805 0.809978 0.7070559 0.6999042 0.6766466 0.639039 0.6842247 0.703336 0.6787885 0.5351868 0.8352889 0.0485777 0.0159307 0.0078770 0.0126241 0.041470 0.0194111 0.5708555 0.4958936 0.5959345 0.5911915 0.5754818 7 0.6885455 0.6860744 2.5907e-03 7 0.535125 0.456970 0.07815498 8.7588e-01 9.4383e-01 insignificant 1.000000 1.0000e+00 insignificant 0.6798271 0.89180598 insignificant 1 1.00000 insignificant -0.01527615 0.7156982 insignificant 1 insignificant 0.6885455 0.0296221 0.6651835 7 0.535125 0.137893 0.3972320 8.2544e-56 1.0000e+00 hypermethylated 1.6509e-53 1.0000e+00 hypermethylated 2.7596e-15 9.9999e-01 hypermethylated 3.0663e-13 1.0000e+00 hypermethylated 0.5135117 1.8717e-10 hypermethylated 1.7015e-08 hypermethylated 0.6938588 0.5834862 0.10876278 7 0.704240 0.509992 0.19424780 4.7914e-08 9.3489e-01 weaklyHypermeth 5.3237e-06 1.0000e+00 weaklyHypermeth 3.2176e-05 9.4466e-01 weaklyHypermeth 4.0220e-03 1.0000e+00 weaklyHypermeth 0.0395755 2.7598e-01 insignificant 1.000000 insignificant 0.6860744 0.0296221 0.66025002 7 0.456970 0.1378925 0.3190771 4.9375e-49 1.0000e+00 hypermethylated 9.8751e-47 1.0000e+00 hypermethylated 9.1480e-13 9.9998e-01 hypermethylated 8.3163e-11 1.00000000 hypermethylated 0.5287879 1.1977e-09 hypermethylated 5.9887e-07 hypermethylated 0.6873307 0.5834862 9.9545e-02 7 0.572256 0.5099923 0.06226339 1.3400e-06 8.2507e-01 weaklyHypermeth 1.3400e-04 1.0000e+00 weaklyHypermeth 1.1069e-02 8.5927e-01 weaklyHypermeth 6.2480e-01 1.000000 insignificant 0.0548516 0.15795907 insignificant 1.000000 insignificant 0.0291709 0.5834862 -0.55921830 7 0.072746 0.509992 -0.4372468 1.0000e+00 1.6975e-32 hypomethylated 1.0000e+00 2.8292e-30 hypomethylated 1.0000e+00 2.9473e-10 hypomethylated 1.00000000 3.2747e-08 hypomethylated -0.4739363 2.2618e-07 hypomethylated 7.5392e-05 hypomethylated chr7 72874435 72875435 27066 CLDN3 ENSG00000165215 0.788692 303 7 0.7229213 468 7 0.4988277 244 7 0.648811 215 7 0.632117 179 9 0.838574 481 7 0.679080 302 7 0.559944 264 7 0.491570 205 7 0.7288700 202 8 0.776750 412 7 0.4330923 124 6 0.3878333 251 7 0.5068436 98 4 0.62759916 248 8 0.637497 116 7 0.463290 100 4 0.4847421 352 7 0.638090 534 7 0.586349 403 7 0.695570 114 7 0.425758 114 8 0.565406 303 7 0.5795173 173 8 0.647022 171 5 0.5951744 400 7 0.616790 222 7 0.5657491 85 5 0.736118 359 7 0.6808435 446 7 0.526641 489 7 0.8276211 456 7 0.0356974 440 7 0.137282 270 7 0.13235294 262 7 0.0119048 76 5 0.175318 390 8 0.0658228 520 8 0.5162995 374 7 0.5527305 384 7 0.6393248 245 7 0.583099 376 7 0.5435425 256 7 0.763670 0.6854125 0.5801784 0.7396479 0.7977920 0.842181 0.8715898 0.7212952 0.699338 0.7756418 0.789671 0.6794759 0.4007482 0.6981072 0.6626351 0.6371718 0.5792511 0.4852140 0.57329581 0.6780585 0.715744 0.4395805 0.809978 0.7070559 0.6999042 0.6766466 0.639039 0.6842247 0.703336 0.6787885 0.5351868 0.8352889 0.0485777 0.0159307 0.0078770 0.0126241 0.041470 0.0194111 0.5708555 0.4958936 0.5959345 0.5911915 0.5754818 7 0.6885455 0.6860744 2.5907e-03 7 0.535125 0.456970 0.07815498 8.7588e-01 9.4383e-01 insignificant 1.000000 1.0000e+00 insignificant 0.6798271 0.89180598 insignificant 1 1.00000 insignificant -0.01527615 0.7156982 insignificant 1 insignificant 0.6885455 0.0296221 0.6651835 7 0.535125 0.137893 0.3972320 8.2544e-56 1.0000e+00 hypermethylated 1.6509e-53 1.0000e+00 hypermethylated 2.7596e-15 9.9999e-01 hypermethylated 3.0663e-13 1.0000e+00 hypermethylated 0.5135117 1.8717e-10 hypermethylated 1.7015e-08 hypermethylated 0.6938588 0.5834862 0.10876278 7 0.704240 0.509992 0.19424780 4.7914e-08 9.3489e-01 weaklyHypermeth 5.3237e-06 1.0000e+00 weaklyHypermeth 3.2176e-05 9.4466e-01 weaklyHypermeth 4.0220e-03 1.0000e+00 weaklyHypermeth 0.0395755 2.7598e-01 insignificant 1.000000 insignificant 0.6860744 0.0296221 0.66025002 7 0.456970 0.1378925 0.3190771 4.9375e-49 1.0000e+00 hypermethylated 9.8751e-47 1.0000e+00 hypermethylated 9.1480e-13 9.9998e-01 hypermethylated 8.3163e-11 1.00000000 hypermethylated 0.5287879 1.1977e-09 hypermethylated 5.9887e-07 hypermethylated 0.6873307 0.5834862 9.9545e-02 7 0.572256 0.5099923 0.06226339 1.3400e-06 8.2507e-01 weaklyHypermeth 1.3400e-04 1.0000e+00 weaklyHypermeth 1.1069e-02 8.5927e-01 weaklyHypermeth 6.2480e-01 1.000000 insignificant 0.0548516 0.15795907 insignificant 1.000000 insignificant 0.0291709 0.5834862 -0.55921830 7 0.072746 0.509992 -0.4372468 1.0000e+00 1.6975e-32 hypomethylated 1.0000e+00 2.8292e-30 hypomethylated 1.0000e+00 2.9473e-10 hypomethylated 1.00000000 3.2747e-08 hypomethylated -0.4739363 2.2618e-07 hypomethylated 7.5392e-05 hypomethylated chr7 72932435 72933435 27073 WBSCR28 ENSG00000175877 0.928144 271 7 0.7114414 367 7 0.8583924 234 7 0.956097 221 5 0.883896 132 7 0.930624 388 7 0.765833 179 7 0.929465 214 7 0.817225 144 7 0.8144587 114 5 0.896206 306 8 0.7810677 95 5 0.9448460 145 7 0.9285714 29 3 0.85472266 134 5 0.691667 33 4 0.804545 41 4 0.8621813 273 5 0.827319 223 7 0.945501 298 7 0.893973 71 7 0.952381 24 1 0.826136 191 7 0.8183318 80 7 0.971092 95 4 0.8233039 285 7 0.917989 67 4 0.8498878 104 7 0.805147 305 7 0.9159311 337 7 0.917066 406 7 0.8983826 322 7 0.0719514 342 7 0.024068 155 7 0.00000000 207 7 0.2578503 154 5 0.017793 170 7 0.4441217 338 7 0.8975478 233 7 0.8755436 239 7 0.9583352 177 5 0.897993 234 7 0.8751512 179 5 0.913149 0.8172134 0.7906004 0.9404771 0.8420801 0.911828 0.8726698 0.9014973 0.911433 0.9060566 0.901036 0.8425728 0.9419751 0.9022694 0.8559982 0.8130268 0.8387837 0.8519756 0.94115494 0.9324889 0.970289 0.9291188 0.915099 0.8883126 0.9659753 0.9249442 0.916119 0.9473325 0.926076 0.9219369 0.8976700 0.8808779 0.0674195 0.0165386 0.0000000 0.2603219 0.033135 0.4718077 0.8699018 0.8866011 0.9385166 0.8784746 0.9332711 3 0.8890914 0.9204198 -2.9493e-02 7 0.737497 0.776498 -0.03900179 9.6796e-01 4.7837e-02 weaklyHypometh 1.000000 1.0000e+00 insignificant 0.9872136 0.00698364 weaklyHypometh 1 1.00000 insignificant -0.02585837 0.2887380 insignificant 1 insignificant 0.8890629 0.1948718 0.6951311 7 0.721246 0.176464 0.5447822 4.4284e-72 1.0000e+00 hypermethylated 2.2142e-69 1.0000e+00 hypermethylated 1.5517e-17 1.0000e+00 hypermethylated 3.1034e-15 1.0000e+00 hypermethylated 0.7206460 1.0840e-04 hypermethylated 3.7596e-03 hypermethylated 0.8906861 0.8970727 -0.00742973 7 0.882866 0.839718 0.04314842 2.3105e-01 1.0037e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.4741e-01 3.4598e-02 weaklyHypometh 1.0000e+00 8.8712e-01 insignificant -0.0443039 7.5303e-02 insignificant 1.000000 insignificant 0.9210180 0.1948718 0.72385859 7 0.779148 0.1764641 0.6026842 1.2332e-52 1.0000e+00 hypermethylated 4.1106e-50 1.0000e+00 hypermethylated 2.1043e-15 1.0000e+00 hypermethylated 7.0144e-13 1.00000000 hypermethylated 0.7465044 9.7630e-05 hypermethylated 3.8018e-03 hypermethylated 0.9219298 0.8970727 2.3549e-02 7 0.849054 0.8397179 0.00933579 3.0173e-02 5.2002e-01 weaklyHypermeth 8.5244e-01 1.0000e+00 insignificant 8.3834e-02 8.1027e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0184455 0.42175201 insignificant 1.000000 insignificant 0.1944241 0.8984820 -0.70133409 7 0.140516 0.871464 -0.7309482 1.0000e+00 1.0547e-27 hypomethylated 1.0000e+00 1.5067e-25 hypomethylated 1.0000e+00 9.5225e-11 hypomethylated 1.00000000 3.1742e-08 hypomethylated -0.7649499 9.1169e-05 hypomethylated 8.2881e-03 hypomethylated chr7 72938035 72939035 27074 WBSCR28 ENSG00000175877 0.752166 305 11 0.4744069 306 13 0.7415446 258 13 0.668061 188 8 0.744869 151 13 0.796577 318 12 0.703928 228 13 0.714460 276 12 0.657133 234 13 0.7307066 217 13 0.781511 425 13 0.4328306 207 13 0.4618658 384 13 0.5452381 29 2 0.63486578 293 13 0.478565 152 9 0.509425 204 13 0.4543253 286 9 0.789523 253 13 0.545643 293 13 0.624543 89 7 0.342873 146 8 0.703317 171 13 0.5044872 88 7 0.609596 82 2 0.7685258 440 13 0.631892 108 8 0.7140496 57 5 0.710491 333 12 0.5185964 485 13 0.739119 402 13 0.7934466 345 11 0.1085050 371 13 0.028049 288 13 0.07557471 303 10 0.3021164 97 8 0.063192 151 13 0.3968869 420 13 0.5525543 300 9 0.3513222 390 13 0.3352878 230 5 0.394012 297 10 0.4744400 287 10 0.676517 0.4378482 0.7251036 0.6050505 0.7098607 0.741698 0.6694395 0.6585159 0.615448 0.7122506 0.768647 0.4095910 0.4301614 NA 0.6028408 0.4679966 0.4750842 0.3965553 0.74654299 0.5098741 0.674101 0.2732610 0.662246 0.6427813 0.5883324 0.6647478 0.660168 0.7542797 0.658770 0.4932672 0.6538239 0.7591305 0.1000325 0.0330773 0.0846049 0.2147685 0.032468 0.3224609 0.4605000 0.2620991 0.3080710 0.2736713 0.3890648 5 0.6205313 0.6693372 -3.7511e-02 12 0.638981 0.674692 -0.03571033 9.8704e-01 7.9773e-02 insignificant 1.000000 1.0000e+00 insignificant 0.9243966 0.26761830 insignificant 1 1.00000 insignificant -0.00752905 0.8751767 insignificant 1 insignificant 0.6205313 0.1680982 0.4638661 13 0.638981 0.166851 0.4721301 5.4105e-49 1.0000e+00 hypermethylated 9.0175e-47 1.0000e+00 hypermethylated 2.9886e-23 1.0000e+00 hypermethylated 1.4943e-20 1.0000e+00 hypermethylated 0.4684948 1.8180e-04 hypermethylated 5.8644e-03 hypermethylated 0.6205313 0.2925532 0.30954559 10 0.638981 0.413180 0.22580160 2.1057e-19 9.9943e-01 hypermethylated 2.1057e-16 1.0000e+00 hypermethylated 8.2820e-12 7.8967e-01 hypermethylated 8.2820e-09 1.0000e+00 hypermethylated 0.2093591 2.5727e-03 weaklyHypermeth 0.171515 insignificant 0.6693372 0.1680982 0.49375608 12 0.674692 0.1668513 0.5078404 3.0984e-36 1.0000e+00 hypermethylated 3.8730e-34 1.0000e+00 hypermethylated 3.3175e-17 1.0000e+00 hypermethylated 1.6587e-14 1.00000000 hypermethylated 0.4760238 1.0265e-04 hypermethylated 3.8018e-03 hypermethylated 0.6693372 0.2925532 3.4489e-01 10 0.674692 0.4131797 0.26151193 8.5372e-19 9.9971e-01 hypermethylated 8.5372e-16 1.0000e+00 hypermethylated 5.3291e-08 8.8045e-01 hypermethylated 2.6646e-05 1.000000 hypermethylated 0.2168881 0.00246827 weaklyHypermeth 0.246827 insignificant 0.1680982 0.2925532 -0.15742051 10 0.166851 0.413180 -0.2463285 1.0000e+00 1.1282e-10 weaklyHypometh 1.0000e+00 4.9051e-09 weaklyHypometh 1.0000e+00 9.7338e-08 weaklyHypometh 1.00000000 6.0836e-06 weaklyHypometh -0.2591357 7.3204e-03 weaklyHypometh 1.3556e-01 insignificant chr7 73030235 73031235 27077 WBSCR28 ENSG00000175877 0.914522 196 6 0.8308039 136 5 0.7532387 146 6 0.953932 234 5 0.929865 81 6 0.902339 260 6 0.874915 131 6 0.869853 118 6 0.841452 120 6 0.9308081 119 6 0.951000 173 6 0.9583333 46 5 0.9112045 119 6 NA 0 0 0.88984635 159 6 0.839198 89 5 0.904012 88 6 0.8264706 253 5 0.960054 105 6 0.931322 191 6 0.909527 122 5 0.866026 92 4 0.893879 156 6 0.9623151 120 6 0.871657 83 4 0.9503060 144 6 0.888863 122 6 0.9022367 81 6 0.884755 67 5 0.9073090 184 6 0.883070 139 6 0.9095394 305 6 0.0913821 183 6 0.241087 143 6 0.17222222 238 6 0.6797619 59 4 0.047222 99 6 0.6480775 165 6 0.7755521 221 5 0.8795055 219 6 0.9140329 160 4 0.919583 180 5 0.7052780 275 5 0.914799 0.8350821 0.7361019 0.9304692 0.9248736 0.877929 0.8653559 0.9050196 0.799703 0.9424432 0.942931 0.9722656 0.8738008 NA 0.8831402 0.8280208 0.8697810 0.8017778 0.94259846 0.9209694 0.878883 0.8203966 0.884985 0.9490985 0.8545351 0.9315116 0.895109 0.8666126 0.838250 0.9089132 0.8481287 0.8874849 0.0740596 0.1596837 0.0412500 0.6225298 0.037113 0.5907826 0.8204864 0.8535914 0.8794107 0.8939219 0.7832687 4 0.8831404 0.8910217 -8.7597e-03 6 0.891028 0.901984 -0.01095590 7.4021e-01 1.6062e-01 insignificant 1.000000 1.0000e+00 insignificant 0.3692055 0.09480579 insignificant 1 1.00000 insignificant -0.00913230 0.5533112 insignificant 1 insignificant 0.8831404 0.2220970 0.6589293 6 0.891028 0.271435 0.6195933 6.2326e-42 1.0000e+00 hypermethylated 6.2326e-40 1.0000e+00 hypermethylated 8.5876e-14 1.0000e+00 hypermethylated 7.1563e-12 1.0000e+00 hypermethylated 0.5800325 3.6826e-03 weaklyHypermeth 6.9484e-02 weaklyHypermeth 0.8831404 0.8407583 0.03168012 5 0.891028 0.856583 0.03444456 9.7339e-02 9.8515e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.0494e-02 9.3967e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0545343 2.7392e-01 insignificant 1.000000 insignificant 0.8910217 0.2220970 0.66720497 6 0.901984 0.2714345 0.6305492 3.9611e-30 1.0000e+00 hypermethylated 2.6407e-28 1.0000e+00 hypermethylated 9.8139e-14 1.0000e+00 hypermethylated 1.4020e-11 1.00000000 hypermethylated 0.5891648 3.5250e-03 weaklyHypermeth 6.9118e-02 weaklyHypermeth 0.8910217 0.8407583 3.8655e-02 5 0.901984 0.8565833 0.04540046 5.0347e-03 9.7805e-01 weaklyHypermeth 2.0139e-01 1.0000e+00 insignificant 2.8596e-02 9.7604e-01 weaklyHypermeth 1.0000e+00 1.000000 insignificant 0.0636666 0.20816179 insignificant 1.000000 insignificant 0.2220970 0.8407583 -0.64054900 5 0.271435 0.856583 -0.5851487 1.0000e+00 5.0353e-13 hypomethylated 1.0000e+00 2.6502e-11 hypomethylated 1.0000e+00 3.3967e-07 hypomethylated 1.00000000 1.7877e-05 hypomethylated -0.5254982 4.4563e-03 weaklyHypometh 1.0335e-01 insignificant chr7 73044235 73045235 27079 WBSCR28 ENSG00000175877 0.929160 177 5 0.8611111 42 2 0.6666667 18 2 0.974815 148 5 0.761355 38 4 0.947740 268 5 0.678571 22 2 0.868750 72 4 0.812500 12 0 0.9583333 40 4 0.873878 148 4 1.0000000 6 0 0.9594156 100 4 1.0000000 34 4 0.90773810 38 4 NA 0 0 0.000000 1 0 0.7392817 186 5 0.869559 185 5 0.943061 133 5 0.986111 37 2 0.863636 63 4 0.833333 51 5 0.9687500 32 2 0.750000 27 2 0.8472110 147 5 0.934659 97 4 0.9166667 10 1 0.860714 110 4 0.6453485 172 5 0.756249 146 5 0.7261017 150 5 0.5697368 58 4 0.310000 82 4 0.40000000 181 5 0.7708333 76 2 0.299020 53 4 0.5855135 215 5 0.9396396 95 4 0.6632521 123 5 0.8457216 133 4 0.763906 105 4 0.9099613 103 2 0.916750 0.8475452 0.7519380 0.9953488 0.7347304 0.962779 0.5913621 0.8406977 0.848837 0.9786822 0.880190 1.0000000 0.9628511 1.0000000 0.9324474 NA 0.7553341 0.8672822 0.86183119 0.9049692 0.979328 0.9226216 0.689922 0.9534884 0.8720930 0.8342022 0.902748 0.9078947 0.855814 0.9233842 0.9077908 0.8773993 0.7133415 0.4613953 0.7441860 0.6729278 0.321933 0.7874365 0.9379845 0.9501532 0.9078678 0.7256485 0.8980703 0 0.8972973 0.8921002 5.4988e-03 5 0.891803 0.887747 0.00405548 5.1561e-01 7.4153e-01 insignificant 1.000000 1.0000e+00 insignificant 0.4869073 0.51491811 insignificant 1 1.00000 insignificant -0.01168257 0.8465412 lowCoverage 1 lowCoverage 0.8972973 0.4578313 0.3772675 5 0.891803 0.510014 0.3817889 3.4971e-14 9.9992e-01 hypermethylated 1.0928e-12 1.0000e+00 hypermethylated 6.6039e-06 9.8435e-01 hypermethylated 1.7379e-04 1.0000e+00 hypermethylated 0.3398653 3.9220e-03 lowCoverage 7.1925e-02 lowCoverage 0.8972973 0.8779174 0.01147623 5 0.891803 0.892239 -0.00043597 4.3963e-01 5.3817e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.2215e-01 4.7510e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0045531 9.5059e-01 lowCoverage 1.000000 lowCoverage 0.8903846 0.4571429 0.40737086 5 0.739789 0.4250114 0.3147779 3.5870e-12 1.0000e+00 hypermethylated 1.3796e-10 1.0000e+00 hypermethylated 5.2169e-05 9.9961e-01 hypermethylated 1.3042e-03 1.00000000 hypermethylated 0.3515479 3.9315e-03 lowCoverage 7.2805e-02 lowCoverage 0.8886756 0.8747764 8.9514e-03 5 0.634105 0.6373133 -0.00320818 8.1420e-01 7.3546e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.9915e-01 9.4847e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0162357 0.78991779 lowCoverage 1.000000 lowCoverage 0.4571429 0.8763441 -0.37516555 5 0.425011 0.743532 -0.3185208 1.0000e+00 7.2230e-07 hypomethylated 1.0000e+00 2.1888e-05 hypomethylated 9.9998e-01 3.1942e-03 weaklyHypometh 1.00000000 6.1427e-02 weaklyHypometh -0.3353122 5.6492e-03 lowCoverage 1.1298e-01 lowCoverage chr7 73075435 73076435 27083 WBSCR28 ENSG00000175877 0.733639 152 8 0.6561920 170 8 0.4406810 157 5 0.659921 109 6 0.446520 80 5 0.758267 229 9 0.624799 96 5 0.680696 175 9 0.670833 124 5 0.7957565 106 5 0.729173 171 9 0.6511774 47 4 0.5109110 213 9 0.6651786 30 4 0.61842105 83 5 0.481293 45 3 0.206512 114 5 0.5690167 118 4 0.528890 156 7 0.729114 149 6 0.749110 96 7 0.399471 100 6 0.703745 126 8 0.6608319 76 5 0.866959 65 4 0.6615649 237 9 0.633730 104 7 0.6491903 56 6 0.666290 129 8 0.6451702 254 9 0.629640 230 9 0.7958541 196 9 0.0547258 221 9 0.056944 187 9 0.06666667 38 3 0.0000000 43 4 0.232686 101 8 0.2639028 248 9 0.4768734 120 5 0.6589513 160 7 0.5283333 99 4 0.361111 136 5 0.4175115 75 4 0.542370 0.4930514 0.4256212 0.4933738 0.4836155 0.643189 0.6800471 0.5202357 0.402460 0.5731387 0.477266 0.3819131 0.1688261 0.4384918 0.4489894 0.4305780 0.1624950 0.3146521 0.31401408 0.4775987 0.647473 0.2049117 0.622120 0.7642057 0.6544191 0.5173958 0.584384 0.3762876 0.536441 0.4516752 0.4284150 0.7469908 0.0071503 0.0141509 0.1006175 0.0256175 0.091493 0.0485992 0.2914753 0.3052682 0.2492662 0.1529350 0.3447150 2 0.5269414 0.6153385 -6.6273e-02 6 0.681974 0.648594 0.03338052 6.3859e-01 4.2140e-02 weaklyHypometh 1.000000 1.0000e+00 insignificant 0.6570978 0.05143163 insignificant 1 1.00000 insignificant -0.06394677 0.1674123 insignificant 1 insignificant 0.5269414 0.0823389 0.4733791 6 0.681974 0.120343 0.5616317 1.7093e-35 1.0000e+00 hypermethylated 1.0683e-33 1.0000e+00 hypermethylated 5.7624e-16 1.0000e+00 hypermethylated 8.2320e-14 1.0000e+00 hypermethylated 0.4953619 2.3929e-06 hypermethylated 1.5953e-04 hypermethylated 0.5269414 0.2949153 0.17976746 4 0.681974 0.505500 0.17647456 9.0310e-05 9.9919e-01 lowCoverage 6.4507e-03 1.0000e+00 lowCoverage 3.3303e-03 9.9721e-01 lowCoverage 1.9590e-01 1.0000e+00 lowCoverage 0.1192934 8.4434e-02 insignificant 1.000000 insignificant 0.6153385 0.0823389 0.54250685 9 0.648594 0.1203425 0.5282512 3.0077e-37 1.0000e+00 hypermethylated 4.2967e-35 1.0000e+00 hypermethylated 9.8864e-15 1.0000e+00 hypermethylated 1.9773e-12 1.00000000 hypermethylated 0.5593087 9.0755e-07 hypermethylated 1.0084e-04 hypermethylated 0.6153385 0.2949153 2.4824e-01 4 0.648594 0.5054997 0.14309404 6.1372e-08 9.9364e-01 lowCoverage 8.7675e-06 1.0000e+00 lowCoverage 2.1472e-04 9.8760e-01 lowCoverage 3.5787e-02 1.000000 lowCoverage 0.1832402 0.01772280 weaklyHypermeth 0.590760 insignificant 0.0823389 0.2949153 -0.27706442 4 0.120343 0.505500 -0.3851572 1.0000e+00 2.7259e-13 lowCoverage 1.0000e+00 1.5144e-11 lowCoverage 1.0000e+00 7.7646e-08 lowCoverage 1.00000000 5.1764e-06 lowCoverage -0.3760685 4.3402e-04 hypomethylated 2.4262e-02 hypomethylated chr7 73145735 73146735 27088 LIMK1 ENSG00000106683 0.364915 271 11 0.3293644 508 14 0.3875066 540 14 0.404171 263 12 0.315442 370 13 0.520813 572 13 0.482579 548 14 0.339046 591 14 0.322917 534 14 0.5351829 483 14 0.454273 706 14 0.3286997 363 13 0.2635050 598 14 0.5607129 276 12 0.40222952 550 14 0.411351 288 13 0.192447 199 6 0.3037544 333 10 0.267983 770 12 0.329091 515 14 0.327656 235 13 0.314026 119 7 0.441493 301 14 0.4058369 251 12 0.212500 75 3 0.3430315 819 14 0.310249 513 13 0.2398476 218 13 0.549853 516 14 0.3602613 942 14 0.368139 831 14 0.3826703 554 13 0.1511578 602 14 0.080666 552 12 0.22424627 654 11 0.0000000 44 7 0.238883 498 13 0.0955163 848 14 0.4326936 354 11 0.3618666 370 12 0.4864927 199 10 0.473396 304 8 0.3141600 179 10 0.352939 0.3162300 0.3253995 0.3745063 0.2435147 0.536356 0.3502435 0.3123092 0.267954 0.4149253 0.447010 0.3179022 0.2192768 0.4176648 0.2763268 0.3894395 0.2283681 0.2180131 0.21576298 0.2955687 0.299347 0.1985741 0.511364 0.3852472 0.2364148 0.3372081 0.303626 0.2633019 0.525890 0.3364637 0.3380369 0.3451907 0.0743752 0.0428491 0.1224656 0.0507102 0.085345 0.0577980 0.3511024 0.2721945 0.3836464 0.3092299 0.2245032 9 0.3481074 0.4119181 -2.8710e-02 14 0.378805 0.312450 0.06635508 8.1654e-01 2.6167e-01 insignificant 1.000000 1.0000e+00 insignificant 0.6401942 0.89075798 insignificant 1 1.00000 insignificant 0.02116886 0.5346190 insignificant 1 insignificant 0.3484080 0.1244917 0.2434420 14 0.435626 0.216722 0.2189038 2.3739e-33 1.0000e+00 hypermethylated 1.2494e-31 1.0000e+00 hypermethylated 3.6071e-20 1.0000e+00 hypermethylated 1.2024e-17 1.0000e+00 hypermethylated 0.2440542 3.5210e-04 hypermethylated 1.0356e-02 hypermethylated 0.3478919 0.3648649 -0.00870187 10 0.349637 0.405618 -0.05598014 7.1774e-03 1.2990e-05 weaklyHypometh 2.4750e-01 2.1650e-03 weaklyHypometh 8.3389e-02 3.7400e-02 weaklyHypometh 1.0000e+00 9.0767e-01 insignificant -0.0379226 3.6564e-01 insignificant 1.000000 insignificant 0.4119948 0.1239049 0.26463504 14 0.325984 0.1667223 0.1592621 3.3999e-32 1.0000e+00 hypermethylated 2.6153e-30 1.0000e+00 hypermethylated 2.8952e-13 9.9992e-01 hypermethylated 3.6190e-11 1.00000000 hypermethylated 0.2228854 6.2655e-04 hypermethylated 1.8428e-02 hypermethylated 0.4128081 0.3639601 1.9248e-02 10 0.363903 0.3706539 -0.00675069 9.4725e-04 4.0208e-02 weaklyHypermeth 4.5107e-02 8.7408e-01 weaklyHypermeth 2.7559e-01 3.3790e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0590915 0.19119734 insignificant 1.000000 insignificant 0.1235497 0.3637660 -0.24964359 10 0.114653 0.362570 -0.2479169 1.0000e+00 4.1224e-21 hypomethylated 1.0000e+00 4.1224e-19 hypomethylated 1.0000e+00 1.9313e-10 hypomethylated 1.00000000 3.2747e-08 hypomethylated -0.2819768 3.0912e-04 hypomethylated 2.2080e-02 hypomethylated chr7 73152335 73153335 27090 LIMK1 ENSG00000106683 0.745408 381 13 0.6658850 178 7 0.6155303 75 7 0.687238 284 13 0.684199 112 7 0.817359 253 7 0.751709 81 4 0.686959 136 7 0.782280 78 7 0.8126307 59 5 0.768352 239 9 0.5388278 41 3 0.8672596 120 7 0.6661422 79 7 0.72814249 130 11 0.380952 24 1 0.533333 27 2 0.7303272 303 8 0.719652 91 5 0.673246 171 7 0.742424 53 2 0.805195 43 3 0.753891 216 12 0.6814286 51 4 0.846234 86 6 0.7043719 156 7 0.656154 80 6 0.6416667 32 1 0.717403 136 7 0.6021394 133 8 0.744639 97 7 0.6910861 216 7 0.6646295 181 7 0.604161 100 7 0.67183051 197 10 1.0000000 4 0 0.736676 105 7 0.6300940 156 7 0.7170558 302 13 0.7136442 329 13 0.7170589 324 13 0.742201 253 13 0.7412876 315 13 0.780669 0.6615471 0.8010000 0.7544498 0.7711746 0.783854 0.7343556 0.8037143 0.851095 0.7220915 0.841008 0.6784762 0.8384901 0.7257091 0.8304143 0.4160000 0.8021658 0.8035376 0.82995304 0.8219250 0.860000 0.7845290 0.793064 0.8230857 0.8223861 0.7465832 0.750236 0.4646849 0.874427 0.6946621 0.7213275 0.7975073 0.7060003 0.6124651 0.6504793 0.9010006 0.756084 0.7940460 0.7839052 0.7977717 0.8027851 0.7860284 0.8184204 1 0.7609228 0.7698229 9.6892e-04 7 0.707146 0.747261 -0.04011514 6.3728e-01 6.5986e-01 insignificant 1.000000 1.0000e+00 insignificant 0.7176993 0.66565527 insignificant 1 1.00000 insignificant -0.02278095 0.4810369 insignificant 1 insignificant 0.7612045 0.6998654 0.0624675 7 0.715820 0.700695 0.0151246 2.5989e-02 9.0143e-01 weaklyHypermeth 2.0304e-01 1.0000e+00 insignificant 7.4789e-01 7.0686e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0251268 7.0810e-01 insignificant 1.0000e+00 insignificant 0.7607168 0.7583716 -0.02148550 7 0.701652 0.727841 -0.02618927 9.5768e-01 2.5580e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.2519e-01 1.8532e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0334777 2.0875e-01 insignificant 1.000000 insignificant 0.7691120 0.6998654 0.06462955 7 0.693102 0.7006950 -0.0075928 7.9168e-02 7.2252e-01 insignificant 5.2778e-01 1.0000e+00 insignificant 7.7430e-01 7.0975e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0023459 9.7127e-01 insignificant 1.0000e+00 insignificant 0.7689922 0.7583716 -2.4909e-02 7 0.684879 0.7278411 -0.04296178 9.1038e-01 1.9888e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.7064e-01 1.9771e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0106968 0.61606133 insignificant 1.000000 insignificant 0.6986486 0.7583716 -0.08946541 7 0.677672 0.727841 -0.0501696 9.4197e-01 2.7629e-02 weaklyHypometh 1.0000e+00 2.2463e-01 insignificant 9.0659e-01 2.6111e-01 insignificant 1.00000000 1.0000e+00 insignificant -0.0083509 8.9401e-01 insignificant 1.0000e+00 insignificant chr7 73325035 73326035 27094 RFC2 ENSG00000049541 0.860606 122 6 0.8489405 78 5 0.6234932 69 5 0.941661 90 6 0.898636 50 5 0.813185 110 5 0.775000 38 5 0.958946 55 3 0.825556 58 3 0.9038462 51 5 0.799421 105 6 0.8842593 32 3 0.6525870 57 5 NA 0 0 0.87306502 63 5 0.861111 36 5 0.896737 47 5 0.9166667 74 6 0.867424 85 5 0.846697 107 5 0.833333 15 0 0.638889 20 3 0.847619 82 6 0.8202020 33 3 0.865260 45 4 0.7277778 80 5 0.754209 51 4 0.8380952 24 3 0.885000 58 5 0.8229151 89 5 0.833760 95 4 0.8433245 173 5 0.7312500 56 3 0.781944 63 5 0.85008818 99 5 0.8403030 46 5 0.535226 50 4 0.8354415 90 5 0.9178010 136 6 0.9512324 173 6 0.9232669 137 6 0.868753 105 5 0.9372632 135 6 0.780393 0.8072811 0.6793781 0.9082649 0.8785109 0.794052 0.7440920 0.9246324 0.733126 0.8528990 0.763319 0.8770730 0.7813662 NA 0.8058084 0.7875207 0.8420224 0.8470149 0.78926391 0.8038494 0.694030 0.6057214 0.793461 0.7249359 0.8944321 0.8445984 0.712121 0.7435873 0.824067 0.7951953 0.8128418 0.7603099 0.7062500 0.7047871 0.7900873 0.8094188 0.788549 0.7808993 0.8773770 0.9288328 0.9029957 0.8112922 0.8848264 3 0.8334589 0.8000000 2.1542e-02 4 0.858336 0.837122 0.02121324 1.4596e-01 8.3384e-01 lowCoverage 1.000000 1.0000e+00 lowCoverage 0.0915205 0.75313842 lowCoverage 1 1.00000 lowCoverage 0.03542438 0.2183878 lowCoverage 1 lowCoverage 0.8334589 0.7747525 0.0477980 5 0.858336 0.779777 0.0785590 1.8012e-02 9.9701e-01 weaklyHypermeth 1.4764e-01 1.0000e+00 insignificant 4.7699e-02 9.9244e-01 weaklyHypermeth 4.4999e-01 1.0000e+00 insignificant 0.0822476 1.6547e-01 lowCoverage 1.0000e+00 lowCoverage 0.8334589 0.9110787 -0.06867795 5 0.858336 0.920237 -0.06190145 9.9898e-01 1.6694e-03 weaklyHypometh 1.0000e+00 9.2744e-02 weaklyHypometh 9.9289e-01 8.0794e-03 weaklyHypometh 1.0000e+00 4.7526e-01 insignificant -0.0750401 5.9582e-03 lowCoverage 0.238329 lowCoverage 0.8000000 0.7747525 0.02424048 4 0.837122 0.7797766 0.0573457 1.6529e-01 9.4598e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 2.1599e-01 8.4192e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 0.0468232 4.0678e-01 lowCoverage 1.0000e+00 lowCoverage 0.8000000 0.9110787 -9.2774e-02 4 0.837122 0.9202370 -0.08311469 9.9944e-01 2.3765e-04 lowCoverage 1.0000e+00 2.6406e-02 lowCoverage 9.4045e-01 1.1918e-03 lowCoverage 1.0000e+00 0.297957 lowCoverage -0.1104645 0.00041538 lowCoverage 0.103845 lowCoverage 0.7747525 0.9110787 -0.11833042 5 0.779777 0.920237 -0.1404604 9.9998e-01 3.7858e-04 weaklyHypometh 1.0000e+00 5.2580e-03 weaklyHypometh 9.9994e-01 4.9092e-04 weaklyHypometh 1.00000000 1.3637e-02 weaklyHypometh -0.1572877 2.2458e-02 lowCoverage 2.7388e-01 lowCoverage chr7 73358835 73359835 27096 CLIP2 ENSG00000106665 0.725172 240 12 0.6998627 437 12 0.6474781 443 12 0.749234 304 8 0.783803 247 13 0.833004 500 12 0.828808 336 12 0.733808 347 14 0.789129 274 11 0.7371605 320 12 0.782857 486 14 0.7056038 143 11 0.6494865 309 13 0.7171418 202 7 0.76380902 446 10 0.796935 144 8 0.620040 55 5 0.6524968 293 10 0.700559 645 12 0.726237 359 14 0.749529 243 14 0.433112 153 8 0.680919 273 13 0.7201185 168 11 0.796153 130 7 0.7686084 502 14 0.623172 402 12 0.7478042 125 9 0.729374 429 12 0.7222220 487 12 0.734952 441 13 0.8856921 439 14 0.0313939 426 12 0.033448 373 14 0.10928972 765 12 0.0930916 99 9 0.141995 477 12 0.2858836 535 13 0.5229802 299 14 0.5346402 356 13 0.4967949 160 9 0.647416 284 11 0.5483667 249 11 0.778270 0.7108433 0.7151464 0.7936013 0.8009848 0.873071 0.8318581 0.7380247 0.836215 0.8181061 0.809794 0.7956784 0.7041107 0.7905808 0.8150039 0.7399362 0.8044558 0.6728127 0.80780829 0.7792873 0.801952 0.5824992 0.818121 0.9090885 0.7977515 0.8441081 0.784860 0.8675153 0.766873 0.8286844 0.8031632 0.9083376 0.0402248 0.0268557 0.0544802 0.0860866 0.122594 0.2878904 0.5820290 0.6308599 0.6712070 0.6746342 0.6239182 8 0.7769089 0.7895570 -3.1547e-02 12 0.720308 0.676565 0.04374292 3.7778e-01 4.1391e-01 insignificant 1.000000 1.0000e+00 insignificant 0.8672786 0.36271262 insignificant 1 1.00000 insignificant 0.01616001 0.6436554 insignificant 1 insignificant 0.7770115 0.1028037 0.6724405 12 0.744494 0.096298 0.6481961 6.6618e-104 1.0000e+00 hypermethylated 6.6618e-101 1.0000e+00 hypermethylated 1.8371e-29 1.0000e+00 hypermethylated 1.8371e-26 1.0000e+00 hypermethylated 0.6162809 3.4194e-06 hypermethylated 2.1371e-04 hypermethylated 0.7770798 0.5081602 0.19543758 10 0.759524 0.623838 0.13568595 1.3604e-15 9.4012e-01 weaklyHypermeth 4.5347e-13 1.0000e+00 weaklyHypermeth 2.2007e-08 9.6295e-01 weaklyHypermeth 1.1003e-05 1.0000e+00 weaklyHypermeth 0.1820917 6.0144e-04 weaklyHypermeth 0.070490 weaklyHypermeth 0.7912146 0.1029192 0.69107305 13 0.750115 0.1100545 0.6400601 9.4257e-72 1.0000e+00 hypermethylated 9.4257e-69 1.0000e+00 hypermethylated 3.5426e-25 1.0000e+00 hypermethylated 3.5426e-22 1.00000000 hypermethylated 0.6001209 6.1899e-08 hypermethylated 1.0316e-05 hypermethylated 0.7912146 0.5070632 2.3649e-01 10 0.750115 0.5432314 0.20688320 1.2681e-15 8.9742e-01 hypermethylated 4.2270e-13 1.0000e+00 hypermethylated 2.8318e-08 9.3282e-01 hypermethylated 2.6646e-05 1.000000 hypermethylated 0.1659317 0.00116988 weaklyHypermeth 0.218802 insignificant 0.1028037 0.5077951 -0.42605751 10 0.096298 0.600328 -0.5040298 9.9994e-01 5.4133e-27 hypomethylated 1.0000e+00 6.7667e-25 hypomethylated 1.0000e+00 9.7169e-12 hypomethylated 1.00000000 4.8584e-09 hypomethylated -0.4341892 9.6750e-06 hypomethylated 1.9350e-03 hypomethylated chr7 73638935 73639935 27105 GTF2IRD1 ENSG00000006704 0.680558 241 7 0.5607637 365 7 0.6819109 72 7 0.627938 269 7 0.582248 79 7 0.608295 299 7 0.570840 78 7 0.681880 153 7 0.562202 99 7 0.6095238 81 6 0.642555 250 7 0.5306122 47 6 0.6047464 105 7 0.7111395 83 6 0.82078164 125 7 0.571429 25 3 0.740000 45 3 0.5185387 364 8 0.620080 130 7 0.634907 222 7 0.563492 42 5 0.503106 72 3 0.558442 133 7 0.6818182 67 4 0.630195 337 7 0.6501073 358 7 0.526042 61 5 0.4404762 35 6 0.617716 150 7 0.6659509 395 7 0.602469 346 7 0.5302524 247 4 0.3327523 172 7 0.194444 170 4 0.17425432 310 7 0.1977666 220 4 0.380171 225 7 0.3880885 289 7 0.5593850 184 7 0.5168482 276 7 0.5768945 288 7 0.523664 244 7 0.4646426 201 7 0.717705 0.6922595 0.7556769 0.6793242 0.6512646 0.696786 0.6740723 0.7351346 0.725144 0.7286634 0.717999 0.6337704 0.6943765 0.7599896 0.8516692 0.7294686 0.8212431 0.5725435 0.72776231 0.6960476 0.649275 0.6112161 0.678499 0.7196146 0.7299785 0.7191464 0.699618 0.5400966 0.701238 0.7583796 0.7401834 0.6459942 0.3218948 0.1430488 0.1178532 0.1816175 0.367841 0.3687855 0.6721266 0.6217402 0.6906422 0.6290002 0.5862895 3 0.7448914 0.8082925 -3.1166e-02 7 0.638961 0.599448 0.03951227 1.0100e-01 4.3791e-02 weaklyHypometh 1.000000 1.0000e+00 insignificant 0.1020519 0.78092874 insignificant 1 1.00000 insignificant 0.04720862 0.0918581 insignificant 1 insignificant 0.7450225 0.1789322 0.5444091 7 0.627066 0.277249 0.3498166 6.8642e-35 9.6617e-01 hypermethylated 3.8134e-33 1.0000e+00 hypermethylated 6.5031e-10 9.3843e-01 hypermethylated 2.9559e-08 1.0000e+00 hypermethylated 0.3501344 1.1279e-04 hypermethylated 3.7596e-03 hypermethylated 0.7450225 0.7217100 0.05925548 7 0.627066 0.532897 0.09416901 4.3655e-04 8.0279e-01 weaklyHypermeth 2.4253e-02 1.0000e+00 weaklyHypermeth 1.4282e-03 9.6328e-01 weaklyHypermeth 9.5216e-02 1.0000e+00 weaklyHypermeth 0.0997605 2.5488e-03 weaklyHypermeth 0.171515 insignificant 0.8093960 0.1789322 0.61064799 7 0.613655 0.2772494 0.3364058 4.8497e-29 2.1422e-01 hypermethylated 2.6943e-27 1.0000e+00 hypermethylated 1.8886e-08 4.9277e-01 hypermethylated 8.9935e-07 1.00000000 hypermethylated 0.3029258 1.9003e-04 hypermethylated 6.5527e-03 hypermethylated 0.8093960 0.7217100 9.4078e-02 7 0.613655 0.5328970 0.08075817 8.0977e-06 9.7843e-01 weaklyHypermeth 6.2290e-04 1.0000e+00 weaklyHypermeth 2.1429e-02 9.8021e-01 weaklyHypermeth 8.6634e-01 1.000000 insignificant 0.0525519 0.09027021 insignificant 1.000000 insignificant 0.1789322 0.7217100 -0.51329131 7 0.277249 0.532897 -0.2556476 1.6146e-01 1.0380e-11 hypomethylated 1.0000e+00 4.9431e-10 hypomethylated 4.1433e-01 5.2429e-05 hypomethylated 1.00000000 1.9418e-03 hypomethylated -0.2503739 8.2901e-04 hypomethylated 3.1885e-02 hypomethylated chr7 73639235 73640235 27106 GTF2IRD1 ENSG00000006704 0.680558 241 7 0.5607637 365 7 0.6819109 72 7 0.627938 269 7 0.582248 79 7 0.608295 299 7 0.570840 78 7 0.681880 153 7 0.562202 99 7 0.6095238 81 6 0.642555 250 7 0.5306122 47 6 0.6047464 105 7 0.7111395 83 6 0.82078164 125 7 0.571429 25 3 0.740000 45 3 0.5185387 364 8 0.620080 130 7 0.634907 222 7 0.563492 42 5 0.503106 72 3 0.558442 133 7 0.6818182 67 4 0.630195 337 7 0.6501073 358 7 0.526042 61 5 0.4404762 35 6 0.617716 150 7 0.6659509 395 7 0.602469 346 7 0.5302524 247 4 0.3327523 172 7 0.194444 170 4 0.17425432 310 7 0.1977666 220 4 0.380171 225 7 0.3880885 289 7 0.5593850 184 7 0.5168482 276 7 0.5768945 288 7 0.523664 244 7 0.4646426 201 7 0.717705 0.6922595 0.7556769 0.6793242 0.6512646 0.696786 0.6740723 0.7351346 0.725144 0.7286634 0.717999 0.6337704 0.6943765 0.7599896 0.8516692 0.7294686 0.8212431 0.5725435 0.72776231 0.6960476 0.649275 0.6112161 0.678499 0.7196146 0.7299785 0.7191464 0.699618 0.5400966 0.701238 0.7583796 0.7401834 0.6459942 0.3218948 0.1430488 0.1178532 0.1816175 0.367841 0.3687855 0.6721266 0.6217402 0.6906422 0.6290002 0.5862895 3 0.7448914 0.8082925 -3.1166e-02 7 0.638961 0.599448 0.03951227 1.0100e-01 4.3791e-02 weaklyHypometh 1.000000 1.0000e+00 insignificant 0.1020519 0.78092874 insignificant 1 1.00000 insignificant 0.04720862 0.0918581 insignificant 1 insignificant 0.7450225 0.1789322 0.5444091 7 0.627066 0.277249 0.3498166 6.8642e-35 9.6617e-01 hypermethylated 3.8134e-33 1.0000e+00 hypermethylated 6.5031e-10 9.3843e-01 hypermethylated 2.9559e-08 1.0000e+00 hypermethylated 0.3501344 1.1279e-04 hypermethylated 3.7596e-03 hypermethylated 0.7450225 0.7217100 0.05925548 7 0.627066 0.532897 0.09416901 4.3655e-04 8.0279e-01 weaklyHypermeth 2.4253e-02 1.0000e+00 weaklyHypermeth 1.4282e-03 9.6328e-01 weaklyHypermeth 9.5216e-02 1.0000e+00 weaklyHypermeth 0.0997605 2.5488e-03 weaklyHypermeth 0.171515 insignificant 0.8093960 0.1789322 0.61064799 7 0.613655 0.2772494 0.3364058 4.8497e-29 2.1422e-01 hypermethylated 2.6943e-27 1.0000e+00 hypermethylated 1.8886e-08 4.9277e-01 hypermethylated 8.9935e-07 1.00000000 hypermethylated 0.3029258 1.9003e-04 hypermethylated 6.5527e-03 hypermethylated 0.8093960 0.7217100 9.4078e-02 7 0.613655 0.5328970 0.08075817 8.0977e-06 9.7843e-01 weaklyHypermeth 6.2290e-04 1.0000e+00 weaklyHypermeth 2.1429e-02 9.8021e-01 weaklyHypermeth 8.6634e-01 1.000000 insignificant 0.0525519 0.09027021 insignificant 1.000000 insignificant 0.1789322 0.7217100 -0.51329131 7 0.277249 0.532897 -0.2556476 1.6146e-01 1.0380e-11 hypomethylated 1.0000e+00 4.9431e-10 hypomethylated 4.1433e-01 5.2429e-05 hypomethylated 1.00000000 1.9418e-03 hypomethylated -0.2503739 8.2901e-04 hypomethylated 3.1885e-02 hypomethylated chr7 73658535 73659535 27107 GTF2IRD1 ENSG00000006704 0.160876 218 18 0.0925433 174 18 0.0878037 174 15 0.090836 320 21 0.058983 116 8 0.173973 490 19 0.039186 199 18 0.126190 98 13 0.038049 231 18 0.1025840 260 18 0.083918 138 13 0.1214816 239 18 0.0510737 221 18 0.0717949 95 10 0.07551571 292 18 0.076168 107 9 0.013187 122 15 0.1360421 282 19 0.140977 88 10 0.133806 346 18 0.177513 113 9 0.041633 267 18 0.112305 180 18 0.0903274 90 9 0.170661 182 17 0.1718710 127 10 0.110993 197 16 0.1762611 142 13 0.192500 70 4 0.0965513 251 18 0.101859 146 14 0.2166695 375 18 0.0113636 120 13 0.022139 133 18 0.00000000 91 3 0.0056818 135 17 0.084845 91 7 0.0241533 167 13 0.2202661 302 18 0.2106545 371 21 0.3027177 224 17 0.089662 258 21 0.2307258 362 21 0.161669 0.0526988 0.1096900 0.1267572 0.0902498 0.129873 0.0414796 0.1132796 0.026063 0.0602882 0.087109 0.1400861 0.0610398 0.0927440 0.0640800 0.0865331 0.0243770 0.1213161 0.11929913 0.0652666 0.215985 0.0559834 0.121867 0.0504276 0.1697815 0.1801245 0.135957 0.1454888 0.161092 0.0539873 0.0546226 0.1958667 0.0144446 0.0198133 0.0183090 0.0048415 0.086561 0.0287543 0.1939295 0.2126035 0.2161410 0.0839794 0.2682108 1 0.0867189 0.1387850 -5.0554e-02 18 0.115336 0.181156 -0.06581920 1.0000e+00 5.9768e-08 weaklyHypometh 1.000000 5.9768e-05 weaklyHypometh 0.9999004 0.01864073 weaklyHypometh 1 1.00000 insignificant -0.04451266 0.0224149 weaklyHypometh 1 insignificant 0.0865245 0.0325645 0.0692002 10 0.122451 0.029473 0.0929780 9.4796e-07 9.9852e-01 weaklyHypermeth 1.6344e-05 1.0000e+00 weaklyHypermeth 9.2883e-06 1.0000e+00 weaklyHypermeth 2.2655e-04 1.0000e+00 weaklyHypermeth 0.0690523 1.0409e-03 weaklyHypermeth 2.7792e-02 weaklyHypermeth 0.0865842 0.1825972 -0.09174588 18 0.111388 0.201349 -0.08996102 1.0000e+00 5.3822e-17 weaklyHypometh 1.0000e+00 5.3822e-14 weaklyHypometh 1.0000e+00 2.8654e-12 weaklyHypometh 1.0000e+00 2.8654e-09 weaklyHypometh -0.1170557 2.4434e-02 weaklyHypometh 0.555320 insignificant 0.1376233 0.0325645 0.11612509 10 0.155793 0.0294732 0.1263195 1.2120e-07 1.0000e+00 weaklyHypermeth 2.7546e-06 1.0000e+00 weaklyHypermeth 4.6324e-06 1.0000e+00 weaklyHypermeth 1.5441e-04 1.00000000 weaklyHypermeth 0.1135650 3.4767e-05 weaklyHypermeth 1.5803e-03 weaklyHypermeth 0.1376880 0.1825972 -4.6272e-02 18 0.173113 0.2013490 -0.02823632 7.6649e-01 1.6337e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9952e-01 4.2413e-03 weaklyHypometh 1.0000e+00 0.456047 insignificant -0.0725430 0.10477664 insignificant 1.000000 insignificant 0.0326975 0.1735657 -0.16325682 10 0.032153 0.156930 -0.1247776 1.0000e+00 5.8541e-15 weaklyHypometh 1.0000e+00 3.4436e-13 weaklyHypometh 1.0000e+00 4.2167e-12 weaklyHypometh 1.00000000 4.2167e-09 weaklyHypometh -0.1861081 3.6564e-03 weaklyHypometh 9.2593e-02 weaklyHypometh chr7 73685735 73686735 27110 GTF2IRD1 ENSG00000006704 0.801504 225 8 0.8255586 144 8 0.7004426 120 8 0.740192 154 8 0.627513 51 6 0.687551 261 8 0.687128 92 8 0.852891 134 8 0.769676 80 5 0.6151430 100 6 0.785511 239 8 0.7291819 58 7 0.8225275 139 8 0.8718182 47 5 0.86854315 109 8 0.570833 54 4 0.856481 44 4 0.7804894 151 7 0.746902 159 8 0.645152 222 8 0.933333 24 1 0.881124 92 8 0.831208 157 8 0.7780998 66 7 0.866071 57 7 0.8329095 204 8 0.858333 50 7 0.6469697 41 4 0.583730 103 8 0.6417574 172 8 0.808335 180 8 0.5789381 313 9 0.6408723 112 8 0.626596 94 8 0.75100131 188 8 0.7724359 40 2 0.363128 79 5 0.7327448 190 8 0.7126681 157 8 0.8717733 166 8 0.7966176 170 8 0.654304 125 5 0.7825109 159 8 0.854597 0.8733529 0.7607511 0.8071604 0.8012098 0.784060 0.7983269 0.8825818 0.783163 0.8371656 0.782384 0.8450754 0.8143068 0.8514908 0.8835316 0.7819820 0.8303837 0.8557844 0.87446512 0.8579742 0.882861 0.8972563 0.884178 0.8021967 0.8552124 0.8267137 0.861081 0.8716644 0.842238 0.8791108 0.8701578 0.8094005 0.7511763 0.6810050 0.7400107 0.8703396 0.659004 0.7949162 0.8338470 0.8975582 0.8462714 0.8503911 0.8396301 3 0.7967480 0.8128855 -1.8810e-02 8 0.722713 0.659502 0.06321088 6.6914e-01 3.1665e-01 insignificant 1.000000 1.0000e+00 insignificant 0.9239960 0.12638735 insignificant 1 1.00000 insignificant -0.02081550 0.6175992 insignificant 1 insignificant 0.7967480 0.7112376 0.0882117 8 0.722713 0.618265 0.1044481 4.7756e-06 9.9999e-01 weaklyHypermeth 7.5803e-05 1.0000e+00 weaklyHypermeth 1.0760e-02 1.0000e+00 weaklyHypermeth 1.3210e-01 1.0000e+00 insignificant 0.1014556 1.6931e-01 insignificant 1.0000e+00 insignificant 0.7967480 0.8275418 -0.03057436 8 0.722713 0.758774 -0.03606132 9.5612e-01 1.5853e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4200e-01 4.2958e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0143228 7.4553e-01 insignificant 1.000000 insignificant 0.8128855 0.7112376 0.10701933 8 0.659502 0.6182648 0.0412372 1.6552e-06 9.9607e-01 weaklyHypermeth 3.1830e-05 1.0000e+00 weaklyHypermeth 8.8387e-04 9.9989e-01 weaklyHypermeth 1.6368e-02 1.00000000 weaklyHypermeth 0.1222711 1.2336e-01 insignificant 1.0000e+00 insignificant 0.8128855 0.8275418 -8.6730e-03 8 0.659502 0.7587742 -0.09927220 8.1069e-01 1.6457e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.7628e-01 8.3848e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0064927 0.90199713 insignificant 1.000000 insignificant 0.7112376 0.8275418 -0.11662563 8 0.618265 0.758774 -0.1405094 9.9987e-01 2.0297e-04 weaklyHypometh 1.0000e+00 3.0753e-03 weaklyHypometh 1.0000e+00 3.5738e-02 weaklyHypometh 1.00000000 3.5588e-01 insignificant -0.1157784 1.4773e-01 insignificant 1.0000e+00 insignificant chr7 73723835 73724835 27114 GTF2I ENSG00000077809 0.911706 319 11 0.7987515 570 11 0.6327182 205 11 0.765563 308 9 0.825278 148 7 0.837556 519 12 0.728410 142 11 0.839723 306 11 0.739348 124 8 0.8743387 161 9 0.843729 497 12 0.8429293 43 4 0.9090334 293 11 0.8631313 100 6 0.91963987 221 11 0.428571 49 3 0.839286 42 3 0.7965826 258 10 0.924664 427 11 0.825885 364 11 0.910928 111 9 0.792208 39 3 0.894257 212 8 0.9176779 176 11 0.846839 297 6 0.9207620 550 11 0.812994 174 11 0.7965278 46 4 0.818668 427 11 0.9081692 528 11 0.836588 600 11 0.8559120 452 11 0.6831548 397 11 0.568476 288 9 0.69608379 291 7 0.6250000 39 3 0.746988 220 12 0.8926314 523 11 0.8643943 154 9 0.9008541 239 11 0.8545145 244 8 0.842683 110 5 0.8821509 239 9 0.896239 0.7852890 0.6213962 0.8263998 0.8257473 0.885937 0.7399336 0.8562991 0.749545 0.8667626 0.862120 0.8662492 0.8957123 0.8735898 0.9142917 0.5314254 0.7831826 0.8538446 0.91273512 0.9123927 0.912897 0.9083327 0.849928 0.9263779 0.9401481 0.9018914 0.908760 0.8311175 0.902623 0.8828344 0.9045326 0.8475025 0.6264750 0.6525554 0.6593917 0.6358382 0.742285 0.9077660 0.8568788 0.8882659 0.8636310 0.7856278 0.8709163 2 0.8769623 0.9138743 -3.1795e-02 11 0.805384 0.801571 0.00381339 9.9274e-01 2.5757e-02 weaklyHypometh 1.000000 1.0000e+00 insignificant 0.9996141 0.00072524 weaklyHypometh 1 0.72524 insignificant -0.05195200 0.0861735 insignificant 1 insignificant 0.8769623 0.7485779 0.1405325 11 0.805384 0.703626 0.1017584 5.3502e-07 9.8458e-01 weaklyHypermeth 9.5540e-06 1.0000e+00 weaklyHypermeth 1.0045e-01 9.4067e-01 insignificant 7.8473e-01 1.0000e+00 insignificant 0.1052864 7.7241e-02 insignificant 8.3957e-01 insignificant 0.8772825 0.8995943 -0.00646414 10 0.856282 0.881779 -0.02549710 9.4354e-01 1.8577e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7797e-01 8.5257e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0615772 3.5467e-02 weaklyHypometh 0.709334 insignificant 0.9138743 0.7485779 0.16202101 11 0.801571 0.7036260 0.0979450 2.1677e-07 9.6910e-01 weaklyHypermeth 4.7123e-06 1.0000e+00 weaklyHypermeth 9.8582e-04 9.8808e-01 weaklyHypermeth 1.7604e-02 1.00000000 weaklyHypermeth 0.1572384 1.6686e-02 weaklyHypermeth 2.3501e-01 insignificant 0.9150943 0.8995943 1.7077e-02 10 0.886555 0.8817790 0.00477616 2.0701e-01 6.8146e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.5115e-01 6.9122e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0096252 0.59016140 insignificant 1.000000 insignificant 0.7492877 0.8995943 -0.09467959 10 0.737564 0.881779 -0.1442153 9.9754e-01 4.0463e-03 weaklyHypometh 1.0000e+00 4.2593e-02 weaklyHypometh 9.8868e-01 9.2310e-03 weaklyHypometh 1.00000000 1.2785e-01 insignificant -0.1668636 1.3703e-02 weaklyHypometh 2.1411e-01 insignificant chr7 73735235 73736235 27115 GTF2I ENSG00000077809 0.666918 230 7 0.6579660 195 7 0.7910750 182 7 0.675775 211 7 0.703447 104 9 0.682582 431 8 0.633390 114 6 0.707011 189 7 0.683992 157 7 0.5724163 115 7 0.741625 276 8 0.6614710 93 4 0.8746078 198 7 0.8526919 123 7 0.70000000 156 7 0.762566 100 4 0.806273 68 6 0.6554352 221 8 0.755240 196 7 0.818051 314 8 0.723343 103 5 0.811708 107 4 0.682008 164 7 0.6293536 122 5 0.690448 77 3 0.7204234 175 7 0.664634 124 8 0.6960373 103 5 0.659044 175 7 0.7023704 229 7 0.612004 225 7 0.7098613 338 7 0.6141189 183 7 0.580221 126 7 0.76444462 163 7 0.6608974 40 3 0.622249 196 9 0.8149650 247 7 0.5548227 321 8 0.7582011 254 7 0.6282066 158 7 0.783724 194 7 0.7117003 176 7 0.863523 0.8730484 0.7896917 0.9085018 0.8430730 0.901773 0.8422226 0.8992534 0.843434 0.8513474 0.838641 0.8051748 0.9117260 0.8525335 0.8482531 0.8805308 0.9075696 0.8671817 0.89949409 0.8816550 0.824773 0.9029791 0.850633 0.8008229 0.8522588 0.8734879 0.890720 0.9124190 0.886645 0.8349154 0.8774315 0.8924206 0.8472698 0.7842791 0.8472653 0.8072202 0.815337 0.8746952 0.8940009 0.9222987 0.8817464 0.9191875 0.9363465 3 0.8358290 0.8151390 1.2570e-02 7 0.732373 0.660820 0.07155259 4.6332e-02 9.8024e-01 weaklyHypermeth 1.000000 1.0000e+00 insignificant 0.4728486 0.68933087 insignificant 1 1.00000 insignificant 0.02835703 0.2251743 insignificant 1 insignificant 0.8358290 0.7811518 0.0404444 7 0.732373 0.640636 0.0917372 2.1034e-03 7.5530e-01 weaklyHypermeth 2.1034e-02 1.0000e+00 weaklyHypermeth 5.4143e-02 4.9135e-01 insignificant 4.9221e-01 1.0000e+00 insignificant 0.0439773 3.2655e-01 insignificant 1.0000e+00 insignificant 0.8358290 0.8485947 -0.03266842 7 0.732373 0.649472 0.08290107 1.8685e-01 2.1247e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.6044e-01 1.5241e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0327957 5.0410e-01 insignificant 1.000000 insignificant 0.8151390 0.7811518 0.02819764 7 0.660820 0.6406357 0.0201846 9.8516e-02 6.4453e-01 insignificant 6.3971e-01 1.0000e+00 insignificant 1.2076e-01 8.3695e-01 insignificant 8.8793e-01 1.00000000 insignificant 0.0156203 7.1357e-01 insignificant 1.0000e+00 insignificant 0.8151390 0.8485947 -4.3197e-02 7 0.660820 0.6494718 0.01134848 7.3799e-01 3.7205e-02 weaklyHypometh 1.0000e+00 8.4557e-01 insignificant 6.8475e-01 1.2875e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0044387 0.92509817 insignificant 1.000000 insignificant 0.7811518 0.8485947 -0.06936487 7 0.640636 0.649472 -0.0088361 6.0446e-01 4.6965e-02 weaklyHypometh 1.0000e+00 3.5107e-01 insignificant 7.2932e-01 7.1153e-02 insignificant 1.00000000 6.0299e-01 insignificant -0.0111816 8.4884e-01 insignificant 1.0000e+00 insignificant chr7 73902635 73903635 27126 GTF2IRD2 ENSG00000196275 0.523943 274 8 0.5035479 283 8 0.4801257 177 8 0.555849 154 8 0.626363 99 7 0.566508 450 8 0.517137 141 6 0.555906 319 8 0.574260 138 8 0.5380613 126 8 0.574736 335 8 0.5399854 81 4 0.5262026 188 8 0.7883117 53 5 0.58214603 212 8 0.577652 48 4 0.619849 56 4 0.5335625 181 8 0.509448 219 8 0.595252 307 8 0.594048 68 7 0.471643 135 8 0.632785 230 8 0.6144841 130 8 0.557021 66 6 0.6405822 290 8 0.487594 152 8 0.6687610 70 6 0.628181 186 8 0.5863975 368 8 0.537639 274 8 0.5743557 449 8 0.5267588 166 8 0.412706 145 8 0.68814287 174 8 0.4746032 52 6 0.541664 159 8 0.4235221 349 8 0.5706481 279 8 0.5773912 282 8 0.5403032 267 8 0.696326 254 8 0.6086371 217 8 0.577826 0.5827102 0.5372889 0.6085408 0.6628571 0.638465 0.5872818 0.6242155 0.634753 0.6081205 0.621948 0.5675797 0.6210909 0.6693942 0.6581526 0.6602564 0.6174721 0.6323192 0.59046998 0.6165933 0.563511 0.6041247 0.697384 0.6401786 0.6328984 0.6755096 0.559375 0.7560827 0.660381 0.6489015 0.6236595 0.6516358 0.5766285 0.5202669 0.6819868 0.4640737 0.649737 0.5333678 0.6546431 0.6551368 0.6268203 0.7513552 0.6794787 5 0.6344702 0.6794872 -3.5130e-02 8 0.637690 0.626678 0.01101203 9.9871e-01 3.5631e-02 weaklyHypometh 1.000000 1.0000e+00 insignificant 0.9910669 0.14273491 insignificant 1 1.00000 insignificant -0.01834869 0.4282699 insignificant 1 insignificant 0.6340891 0.5655502 0.0608193 8 0.547112 0.507389 0.0397235 5.9433e-03 2.5458e-01 weaklyHypermeth 5.3543e-02 1.0000e+00 weaklyHypermeth 1.2238e-01 2.5891e-01 insignificant 8.9898e-01 1.0000e+00 insignificant 0.0532096 2.6802e-01 insignificant 1.0000e+00 insignificant 0.6340891 0.6812933 -0.04554419 8 0.547112 0.593340 -0.04622785 7.2296e-01 1.2203e-04 weaklyHypometh 1.0000e+00 1.3559e-02 weaklyHypometh 8.1490e-01 7.4493e-05 weaklyHypometh 1.0000e+00 1.8623e-02 weaklyHypometh -0.0342189 2.9987e-01 insignificant 1.000000 insignificant 0.6789867 0.5655502 0.10381067 8 0.583347 0.5073888 0.0759584 5.8711e-04 9.2335e-01 weaklyHypermeth 6.8269e-03 1.0000e+00 weaklyHypermeth 1.7707e-02 7.5289e-01 weaklyHypermeth 1.9247e-01 1.00000000 insignificant 0.0715583 1.5575e-01 insignificant 1.0000e+00 insignificant 0.6789867 0.6812933 -7.0569e-03 8 0.583347 0.5933401 -0.00999288 5.4215e-01 1.0015e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.2668e-01 1.0621e-02 weaklyHypometh 1.0000e+00 0.708085 insignificant -0.0158702 0.63346682 insignificant 1.000000 insignificant 0.5655502 0.6812933 -0.10813329 8 0.507389 0.593340 -0.0859513 9.7635e-01 1.4759e-03 weaklyHypometh 1.0000e+00 1.8448e-02 weaklyHypometh 9.8289e-01 1.2092e-02 weaklyHypometh 1.00000000 1.5704e-01 insignificant -0.0874284 1.1234e-01 insignificant 9.1330e-01 insignificant chr7 73961835 73962835 27127 PMS2L5 ENSG00000123965 0.726935 94 6 0.9720248 124 2 0.7442896 90 3 0.722222 47 3 0.988095 60 2 0.743226 121 8 0.789141 94 3 0.843989 64 2 0.814815 74 2 0.9559140 64 2 0.810053 94 3 0.8635931 84 2 0.8737374 99 2 NA 0 0 0.84720413 99 2 0.636866 67 2 0.737970 327 6 0.6606622 64 6 0.727017 94 7 0.773965 108 8 0.900000 26 3 0.375000 5 0 0.654683 86 6 0.6986532 22 2 1.000000 2 0 0.7399731 173 8 0.769444 25 2 0.7876068 30 3 0.802981 90 2 0.7867511 151 5 0.681515 209 8 0.7955798 167 8 0.8553792 115 3 0.779727 39 2 0.56025838 120 7 0.8097643 68 5 0.833333 28 2 0.7816331 219 9 0.7574405 90 5 0.7614801 138 7 0.8413462 85 4 0.779101 66 7 0.6163004 55 5 0.856922 0.9658081 0.7827031 1.0000000 0.9854497 0.893519 0.8256173 0.8833945 0.884774 0.9461171 0.863081 0.9073545 0.9197531 NA 0.8873236 0.7783922 0.7333333 0.9339524 0.74128540 0.8957090 0.922222 0.5172678 0.934136 0.7427984 0.9341382 0.9416582 0.829321 0.8292972 0.870310 0.8722443 0.9513696 0.9391718 0.8867333 0.8418887 0.7376543 0.9915825 0.907407 0.8922938 0.8981481 0.8463349 0.9768519 0.9320988 0.9422936 0 0.8432956 0.8336714 3.2568e-03 6 0.778971 0.688769 0.09020271 3.8647e-01 7.3989e-01 insignificant 1.000000 1.0000e+00 insignificant 0.2917426 0.99937836 insignificant 1 1.00000 insignificant 0.05232054 0.3016245 lowCoverage 1 lowCoverage 0.8431267 0.8387097 0.0143070 6 0.729854 0.740571 -0.0107173 3.3838e-01 6.0720e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.2192e-01 6.5771e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0316536 5.3816e-01 lowCoverage 1.0000e+00 lowCoverage 0.8428112 0.7304147 0.01766533 5 0.734646 0.749989 -0.01534315 5.8458e-01 4.5055e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.1618e-01 4.8206e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0505359 2.8006e-01 lowCoverage 1.000000 lowCoverage 0.8343496 0.8387097 0.01204685 6 0.730717 0.7405710 -0.0098540 5.8755e-01 5.1100e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.8600e-01 5.4729e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0206670 7.4245e-01 lowCoverage 1.0000e+00 lowCoverage 0.8343496 0.7308585 -1.1713e-02 5 0.730717 0.7592473 -0.02853027 9.3864e-01 3.0059e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9697e-01 1.8855e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0017846 0.97551591 lowCoverage 1.000000 lowCoverage 0.8387097 0.7308585 -0.01252810 5 0.740571 0.759247 -0.0186763 9.8069e-01 4.0453e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4271e-01 3.3502e-01 insignificant 1.00000000 1.0000e+00 insignificant 0.0188824 7.4867e-01 lowCoverage 1.0000e+00 lowCoverage chr7 74021135 74022135 27134 ENSG00000183086 0.911818 247 7 0.8301914 273 9 0.8170811 125 8 0.914831 272 6 0.794031 84 8 0.870203 300 9 0.887680 143 8 0.833868 104 8 0.925824 98 8 0.8680556 63 8 0.876352 387 9 0.7997280 86 7 0.8987800 132 8 0.8750000 47 4 0.85142857 76 8 0.755952 79 6 0.680556 37 3 0.8138763 244 4 0.853816 217 9 0.828205 303 9 0.826637 67 8 0.677083 58 4 0.944329 178 8 0.8831169 59 7 0.969183 163 5 0.7800183 285 9 0.669318 63 7 0.9404762 45 6 0.842626 139 9 0.8789269 258 9 0.912747 278 9 0.8656101 240 9 0.9095675 178 9 0.968889 125 8 0.82447311 234 9 1.0000000 24 1 0.840756 123 8 0.7666824 195 9 0.9737691 222 6 0.9215332 201 7 0.7661170 357 5 0.636357 182 4 0.9640677 277 6 0.956517 0.9331461 0.8962085 0.9567848 0.8730376 0.886796 0.9390011 0.9185172 0.924864 0.9246988 0.897537 0.9703534 0.9858264 0.9527570 0.9337349 0.9107143 0.9435241 0.9403133 0.94304509 0.9731542 0.816014 0.8569277 0.922163 0.9432014 0.9663258 0.9150922 0.785563 0.9648594 0.947163 0.9260108 0.9223359 0.9232758 0.9393146 0.9560910 0.8789281 0.9948547 0.881208 0.9254159 0.9516419 0.9395989 0.8774710 0.8356916 0.9368316 4 0.9059391 0.8990726 4.3090e-03 9 0.820095 0.834305 -0.01420989 5.5496e-01 6.4947e-01 insignificant 1.000000 1.0000e+00 insignificant 0.2695528 0.63942965 insignificant 1 1.00000 insignificant -0.00480874 0.8793533 insignificant 1 insignificant 0.9059391 0.8941980 -0.0058945 9 0.820095 0.797852 0.0222428 1.6068e-01 4.1962e-01 insignificant 9.7271e-01 1.0000e+00 insignificant 6.2787e-01 3.0949e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0406975 3.3510e-01 insignificant 1.0000e+00 insignificant 0.9059391 0.9556094 -0.01387074 5 0.820095 0.899938 -0.07984308 7.7189e-01 7.7462e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 7.2512e-01 6.5058e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0080048 9.1013e-01 insignificant 1.000000 insignificant 0.8990726 0.8941980 -0.00558801 9 0.834305 0.7978520 0.0364527 2.5154e-01 6.3530e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.6893e-01 4.6513e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0358888 4.5518e-01 insignificant 1.0000e+00 insignificant 0.8990726 0.9556094 -2.4177e-02 5 0.834305 0.8999379 -0.06563319 8.2323e-01 9.7777e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3311e-01 1.7456e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0031961 0.96588115 insignificant 1.000000 insignificant 0.8941980 0.9556094 -0.03565341 5 0.797852 0.899938 -0.1020859 8.9739e-01 1.6632e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.9561e-01 7.1809e-01 insignificant 1.00000000 1.0000e+00 insignificant 0.0326927 6.7802e-01 insignificant 1.0000e+00 insignificant chr7 74065935 74066935 27140 ENSG00000183086 0.778220 179 6 0.6673217 118 6 0.5069444 63 6 0.821389 127 6 0.793693 61 6 0.662004 200 6 0.764857 75 6 0.720168 72 6 0.558390 61 6 0.6708333 47 4 0.577600 184 6 0.5296919 46 4 0.8278388 72 6 0.7972222 35 4 0.67174370 48 4 0.645833 35 5 0.891667 21 2 0.7773952 119 6 0.816378 81 6 0.689576 183 6 0.593407 30 2 0.905229 24 1 0.680129 110 6 0.5395833 41 5 0.851190 28 3 0.7774182 144 6 0.736538 27 3 0.8392857 19 1 0.768875 87 5 0.7576245 116 6 0.824097 115 6 0.7362843 197 6 0.6143048 98 5 0.631480 73 6 0.71228894 159 8 0.4722222 17 1 0.717207 86 5 0.8025210 126 6 0.8251082 103 6 0.7129890 138 6 0.7422169 132 6 0.699871 125 6 0.8651066 146 6 0.762244 0.6779512 0.6021324 0.7750449 0.8164407 0.769235 0.7885644 0.7831254 0.744228 0.7444869 0.724622 0.7730244 0.8821179 0.7580147 0.7802394 0.7510101 0.8183926 0.7981138 0.82029895 0.7532779 0.679321 0.8496732 0.704636 0.7946128 0.8383838 0.7684133 0.768780 0.7954545 0.792642 0.7507996 0.8670404 0.7763654 0.7498082 0.6798984 0.7026205 0.5622896 0.726273 0.8582888 0.8208856 0.8211043 0.8230069 0.7597699 0.8060361 1 0.7225877 0.7457265 -1.9020e-02 6 0.678633 0.749941 -0.07130749 9.7606e-01 3.4033e-01 insignificant 1.000000 1.0000e+00 insignificant 0.9947018 0.14031290 insignificant 1 1.00000 insignificant -0.04236685 0.2880291 lowCoverage 1 lowCoverage 0.7225877 0.6708408 0.0575170 6 0.678633 0.649309 0.0293237 1.8257e-02 9.9447e-01 weaklyHypermeth 1.4843e-01 1.0000e+00 insignificant 2.9420e-02 9.8510e-01 weaklyHypermeth 3.1298e-01 1.0000e+00 insignificant 0.0501009 3.6641e-01 insignificant 1.0000e+00 insignificant 0.7246297 0.7725857 -0.06026175 6 0.789744 0.840578 -0.05083351 9.9924e-01 4.6262e-02 weaklyHypometh 1.0000e+00 7.7582e-01 insignificant 9.9829e-01 7.3039e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0606200 1.6804e-01 insignificant 1.000000 insignificant 0.7457265 0.6708408 0.07639742 6 0.749941 0.6493095 0.1006312 1.9916e-03 9.8575e-01 weaklyHypermeth 2.1187e-02 1.0000e+00 weaklyHypermeth 6.2755e-03 9.9496e-01 weaklyHypermeth 8.2573e-02 1.00000000 weaklyHypermeth 0.0924678 1.2840e-01 lowCoverage 1.0000e+00 lowCoverage 0.7462527 0.7715180 -4.2744e-02 6 0.781183 0.8206500 -0.03946677 9.9356e-01 1.9130e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6490e-01 7.1110e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0182532 0.68968045 lowCoverage 1.000000 lowCoverage 0.6720430 0.7715180 -0.12557012 6 0.730473 0.820650 -0.0901769 1.0000e+00 6.8127e-04 weaklyHypometh 1.0000e+00 8.7342e-03 weaklyHypometh 9.9997e-01 6.8279e-03 weaklyHypometh 1.00000000 9.8956e-02 weaklyHypometh -0.1107209 8.3741e-02 insignificant 7.5166e-01 insignificant chr7 74287535 74288535 27153 NCF1C ENSG00000165178 0.609113 100 9 0.4773747 139 8 0.4279365 70 8 0.561632 131 9 0.699204 125 8 0.525895 109 8 0.637874 81 8 0.554725 100 8 0.546645 74 8 0.6883072 75 7 0.590417 192 9 0.6640625 57 3 0.7128329 117 9 0.7698738 100 9 0.51336996 112 8 0.632440 27 4 0.472222 18 2 0.6894731 109 6 0.650833 56 7 0.591429 76 8 0.557143 38 3 0.735417 26 2 0.640459 105 8 0.5024691 59 8 0.731342 86 8 0.6352280 135 9 0.722894 40 2 0.5527778 32 4 0.607620 78 4 0.5601659 130 8 0.587767 116 8 0.6087500 87 8 0.5984330 119 8 0.591905 106 9 0.59923369 164 9 0.6893939 36 3 0.429956 108 9 0.4480912 148 9 0.5154327 100 9 0.5165512 129 9 0.6253648 98 9 0.544460 74 4 0.6014634 111 8 0.768835 0.5498755 0.5231262 0.6976555 0.6832632 0.575371 0.5974210 0.6545011 0.745664 0.6309963 0.632398 0.6605960 0.6596696 0.7448284 0.6203333 0.6586908 0.5413804 0.7456215 0.84028698 0.7281615 0.691265 0.7323400 0.694520 0.6044886 0.7091693 0.6612647 0.826759 0.5825055 0.643528 0.6846314 0.7010609 0.8029801 0.6028188 0.7239357 0.6626639 0.6968349 0.540636 0.6005623 0.5886105 0.6191422 0.6520169 0.6088543 0.6026382 3 0.6338330 0.6505376 -1.9327e-02 8 0.598466 0.563909 0.03455677 7.5453e-01 2.5886e-01 insignificant 1.000000 1.0000e+00 insignificant 0.7229885 0.22063861 insignificant 1 1.00000 insignificant -0.01938628 0.5234613 insignificant 1 insignificant 0.6338330 0.6035242 0.0359884 8 0.598466 0.475259 0.1232067 5.8707e-02 9.9082e-01 insignificant 4.0211e-01 1.0000e+00 insignificant 1.4138e-01 9.9047e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0412810 3.9373e-01 insignificant 1.0000e+00 insignificant 0.6327957 0.5898438 0.02576000 8 0.570812 0.531618 0.03919371 2.1501e-01 9.4027e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.3815e-01 9.9336e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0401287 2.1097e-01 insignificant 1.000000 insignificant 0.6505376 0.6035242 0.05520184 8 0.563909 0.4752588 0.0886499 3.4725e-02 9.9891e-01 weaklyHypermeth 2.6151e-01 1.0000e+00 insignificant 7.2974e-02 9.9923e-01 insignificant 5.8379e-01 1.00000000 insignificant 0.0606672 2.2794e-01 insignificant 1.0000e+00 insignificant 0.6515642 0.5898438 4.7962e-02 8 0.586966 0.5316184 0.05534793 1.6487e-02 9.4388e-01 weaklyHypermeth 5.1523e-01 1.0000e+00 insignificant 1.0019e-02 9.8078e-01 weaklyHypermeth 6.2480e-01 1.000000 insignificant 0.0595150 0.08411573 insignificant 1.000000 insignificant 0.6044118 0.5898438 -0.00826727 9 0.522785 0.531618 -0.0088337 8.0407e-01 5.8864e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.3017e-01 7.7890e-01 insignificant 1.00000000 1.0000e+00 insignificant -0.0011522 9.8094e-01 insignificant 1.0000e+00 insignificant chr7 74701735 74702735 27161 ENSG00000212836 0.435423 69 3 0.4419344 107 6 0.3183673 30 5 0.438889 66 6 0.416937 39 5 0.645089 63 5 0.619048 77 5 0.572431 82 5 0.587755 26 4 0.7729167 29 4 0.666092 211 6 0.3000000 6 0 0.6333333 62 6 0.6094915 72 6 0.81269841 54 5 0.725000 12 1 0.900000 9 0 0.5542308 78 2 0.698529 32 1 0.464827 54 5 0.583333 20 1 0.866667 13 0 0.541667 41 2 0.5880952 45 7 0.791667 34 1 0.4508514 94 5 0.606250 28 4 0.3333333 13 0 0.543252 59 5 0.5954861 57 5 0.556944 76 6 0.5837542 66 5 0.3761905 78 5 0.628283 56 5 0.49310077 99 6 0.8750000 12 1 0.408995 57 5 0.4546485 86 6 0.5037500 45 2 0.5651491 45 3 0.6045918 69 6 0.481818 42 2 0.4090570 119 6 0.783643 0.6181631 0.4453782 0.5267974 0.6680248 0.783964 0.5887021 0.7037984 0.626331 0.8366013 0.696813 0.2941176 0.6941176 0.6912282 0.7396514 0.7303922 0.9019608 0.7063348 0.91926182 0.5897950 0.696078 0.8692810 0.668301 0.7401494 0.7549020 0.5224913 0.769608 0.7580315 0.669153 0.6595861 0.6949891 0.6982076 0.5247432 0.7554961 0.6876220 0.8774510 0.622082 0.6381886 0.8058824 0.5908209 0.6484594 0.6730838 0.5723440 0 0.6281834 0.6025641 2.9520e-02 5 0.537193 0.433099 0.10409411 8.8121e-02 5.2304e-01 insignificant 1.000000 1.0000e+00 insignificant 0.3548907 0.62589780 insignificant 1 1.00000 insignificant -0.00612534 0.9099307 lowCoverage 1 lowCoverage 0.6284014 0.5592784 0.0578083 5 0.540912 0.366512 0.1744005 1.9700e-02 9.9621e-01 weaklyHypermeth 1.5635e-01 1.0000e+00 insignificant 1.0933e-01 9.9113e-01 insignificant 8.3047e-01 1.0000e+00 insignificant 0.0412801 6.3795e-01 lowCoverage 1.0000e+00 lowCoverage 0.6284014 0.5156250 0.06432303 5 0.540912 0.514828 0.02608452 1.4875e-01 9.5660e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.1615e-01 9.2846e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0677764 1.9170e-01 lowCoverage 1.000000 lowCoverage 0.6036697 0.5592784 0.03510529 5 0.476409 0.3665119 0.1098970 9.0749e-02 9.7161e-01 insignificant 6.0099e-01 1.0000e+00 insignificant 1.7252e-01 9.7069e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0474054 5.9600e-01 lowCoverage 1.0000e+00 lowCoverage 0.6036697 0.5156250 2.8047e-02 5 0.476409 0.5148279 -0.03841899 4.2741e-01 7.9723e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.5543e-01 8.7790e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0739018 0.17986877 lowCoverage 1.000000 lowCoverage 0.5592784 0.5156250 0.00079226 5 0.366512 0.514828 -0.1483160 8.8777e-01 8.7529e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.5502e-01 8.9114e-01 insignificant 1.00000000 1.0000e+00 insignificant 0.0264963 7.5979e-01 lowCoverage 1.0000e+00 lowCoverage chr7 74866135 74867135 27166 TRIM73 ENSG00000178809 0.612666 351 9 0.6315542 332 8 0.7888267 362 8 0.598517 342 9 0.613846 161 9 0.711295 389 8 0.713122 309 8 0.676035 257 8 0.610674 313 9 0.6471739 273 9 0.560631 328 9 0.5474483 181 9 0.6679035 350 9 0.7203030 41 3 0.50450636 292 8 0.609290 156 8 0.616981 187 7 0.4410222 420 9 0.736981 233 8 0.529315 318 8 0.670627 144 8 0.625483 191 7 0.559473 264 8 0.5474189 174 8 0.593665 221 7 0.6082859 362 8 0.422724 236 9 0.7751360 137 9 0.647981 320 10 0.7076698 416 8 0.770309 333 9 0.5869225 461 9 0.3350876 344 9 0.338350 250 8 0.22413094 335 8 0.3991306 189 9 0.265826 218 8 0.4602250 343 8 0.7675572 347 9 0.6662086 317 8 0.5855376 311 8 0.753141 313 8 0.5425577 364 7 0.546310 0.5886996 0.7063296 0.5657902 0.6310855 0.633275 0.6686080 0.7281386 0.573350 0.5691244 0.623288 0.6159272 0.7336616 0.6189596 0.5449479 0.5705520 0.6194954 0.5370312 0.69592226 0.5596684 0.608981 0.6088923 0.586352 0.5783206 0.5238160 0.6497174 0.496430 0.7032468 0.646037 0.6602395 0.7534842 0.5581615 0.2594238 0.2084017 0.1710993 0.3856339 0.233420 0.3622954 0.7282457 0.6990707 0.5301386 0.6965654 0.5549486 7 0.6652368 0.6646192 -6.9285e-03 8 0.603137 0.566317 0.03682090 6.2536e-01 3.3108e-01 insignificant 1.000000 1.0000e+00 insignificant 0.5638065 0.71412387 insignificant 1 1.00000 insignificant 0.00059666 0.9862695 insignificant 1 insignificant 0.6652959 0.4091721 0.3011020 8 0.613451 0.321667 0.2917847 8.0273e-36 1.0000e+00 hypermethylated 5.7338e-34 1.0000e+00 hypermethylated 2.2048e-13 9.9998e-01 hypermethylated 1.6960e-11 1.0000e+00 hypermethylated 0.2897795 7.6666e-05 hypermethylated 2.8395e-03 hypermethylated 0.6652959 0.6023002 -0.02430211 8 0.613451 0.695063 -0.08161162 9.7523e-01 7.0143e-03 weaklyHypometh 1.0000e+00 2.2265e-01 insignificant 9.7360e-01 4.0845e-02 weaklyHypometh 1.0000e+00 9.0767e-01 insignificant -0.0360960 4.8600e-01 insignificant 1.000000 insignificant 0.6648233 0.4091721 0.31194971 8 0.622948 0.3216665 0.3012817 1.0931e-26 1.0000e+00 hypermethylated 5.7533e-25 1.0000e+00 hypermethylated 4.3414e-12 9.9999e-01 hypermethylated 3.3396e-10 1.00000000 hypermethylated 0.2891828 4.1192e-05 hypermethylated 1.7163e-03 hypermethylated 0.6648233 0.6023002 -1.8433e-02 8 0.622948 0.6950628 -0.07211461 9.5103e-01 6.7556e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4586e-01 1.0446e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0366926 0.50819097 insignificant 1.000000 insignificant 0.4091721 0.6023002 -0.36651631 9 0.321667 0.695063 -0.3733963 1.0000e+00 9.9089e-17 hypomethylated 1.0000e+00 6.1931e-15 hypomethylated 1.0000e+00 1.8723e-08 hypomethylated 1.00000000 1.3373e-06 hypomethylated -0.3258754 4.2069e-04 hypomethylated 2.4262e-02 hypomethylated chr7 75337835 75338835 27182 CCL24 ENSG00000106178 0.676084 134 9 0.6972417 155 9 0.4665344 86 5 0.602189 104 9 0.655263 90 9 0.661012 116 9 0.551019 116 9 0.706069 107 9 0.438384 51 3 0.7321429 74 9 0.685077 213 9 0.6094276 40 2 0.8021471 123 9 0.6606667 102 9 0.66705839 113 9 0.374074 36 2 0.722393 107 4 0.6152501 165 8 0.653033 79 4 0.680115 103 9 0.606790 48 6 0.666667 16 0 0.578726 72 4 0.5303030 32 1 0.751724 74 5 0.6132456 168 9 0.608730 60 5 0.7248677 51 5 0.444353 123 5 0.6171802 107 9 0.651094 82 9 0.6333333 95 9 0.5819593 135 9 0.485538 85 9 0.47328869 147 8 0.5000000 20 4 0.468043 83 5 0.5744994 99 9 0.6458571 110 9 0.6632484 91 5 0.6369168 105 8 0.490186 84 5 0.7425500 111 6 0.700358 0.6290024 0.5291514 0.6608808 0.6613618 0.644252 0.6460432 0.7048183 0.563811 0.7584707 0.672907 0.6841492 0.7298395 0.6613675 0.7168622 0.4638889 0.7040927 0.6134588 0.69243445 0.6965745 0.571581 0.7115385 0.625310 0.6356838 0.7194960 0.6893701 0.575473 0.7075702 0.589219 0.6611578 0.6908023 0.6841168 0.5664774 0.4902829 0.4851439 0.6369301 0.509816 0.5889359 0.6414400 0.6756926 0.6459374 0.5858984 0.7428529 1 0.6770833 0.6659483 2.2326e-02 9 0.730204 0.463908 0.26629653 3.1194e-01 9.2193e-01 insignificant 1.000000 1.0000e+00 insignificant 0.5940663 0.78133599 insignificant 1 1.00000 insignificant 0.01384119 0.6790999 insignificant 1 insignificant 0.6769450 0.5430580 0.1188561 9 0.706072 0.485521 0.2205503 3.2713e-05 1.0000e+00 weaklyHypermeth 4.3617e-04 1.0000e+00 weaklyHypermeth 3.9196e-03 1.0000e+00 weaklyHypermeth 5.5994e-02 1.0000e+00 weaklyHypermeth 0.1188709 1.3289e-03 weaklyHypermeth 3.2011e-02 weaklyHypermeth 0.6763446 0.7664671 -0.02831637 9 0.645132 0.669655 -0.02452232 6.0256e-01 4.8555e-02 weaklyHypometh 1.0000e+00 7.7582e-01 insignificant 5.2198e-01 1.9200e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0029927 9.5115e-01 insignificant 1.000000 insignificant 0.6670270 0.5422535 0.10011888 9 0.499519 0.4387504 0.0607684 9.5106e-04 9.9086e-01 weaklyHypermeth 1.0686e-02 1.0000e+00 weaklyHypermeth 1.1560e-02 9.9933e-01 weaklyHypermeth 1.3441e-01 1.00000000 insignificant 0.1050297 4.4742e-03 weaklyHypermeth 8.1348e-02 weaklyHypermeth 0.6684724 0.7664671 -4.5349e-02 9 0.610523 0.6696547 -0.05913173 9.4305e-01 7.1566e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 8.1948e-01 8.1405e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0168338 0.73188267 insignificant 1.000000 insignificant 0.5441696 0.7664671 -0.15625376 9 0.536251 0.669655 -0.1334042 9.3396e-01 5.3240e-05 weaklyHypometh 1.0000e+00 1.0439e-03 weaklyHypometh 9.8076e-01 1.2543e-02 weaklyHypometh 1.00000000 1.6081e-01 insignificant -0.1218636 3.7657e-02 weaklyHypometh 4.2311e-01 insignificant chr7 75403935 75404935 27185 POR ENSG00000127948 0.783000 249 8 0.6012884 190 8 0.6340604 110 8 0.717458 176 8 0.619564 90 7 0.664741 331 8 0.711420 94 8 0.778463 144 7 0.708837 85 7 0.6784714 97 8 0.783203 289 8 0.4663420 55 4 0.7781612 141 8 0.7685714 40 5 0.63982472 115 8 0.722064 38 4 0.689796 48 4 0.6950802 168 8 0.780004 143 8 0.644731 251 8 0.593007 47 4 0.712500 55 4 0.672891 143 8 0.9147727 42 2 0.857359 57 5 0.7612807 221 8 0.912121 62 5 0.5570988 31 3 0.633175 146 8 0.7175314 251 8 0.800224 250 8 0.6180062 328 8 0.7532046 109 6 0.641208 91 8 0.57791834 140 8 0.6263889 37 4 0.747885 73 5 0.7237779 243 8 0.7817318 195 8 0.7644306 202 8 0.6759581 152 8 0.800540 167 8 0.7849730 167 8 0.775085 0.7584434 0.6992656 0.7465122 0.7461070 0.813632 0.7915530 0.8162880 0.756406 0.7286679 0.786413 0.6126747 0.8705073 0.8170203 0.7285230 0.7040522 0.7300413 0.8440708 0.83221084 0.8276115 0.855288 0.8167535 0.799424 0.9069602 0.8829365 0.8170146 0.903961 0.6933436 0.789653 0.8529623 0.7745721 0.7755357 0.7765152 0.6235238 0.7582404 0.6983218 0.824598 0.7856968 0.8101000 0.8087320 0.7804199 0.8084639 0.8166958 2 0.7400140 0.7752603 -3.2636e-02 8 0.704404 0.690399 0.01400556 9.5683e-01 8.4389e-02 insignificant 1.000000 1.0000e+00 insignificant 0.9826896 0.01250073 weaklyHypometh 1 1.00000 insignificant -0.03590982 0.3759663 insignificant 1 insignificant 0.7400140 0.7243867 0.0271515 8 0.704404 0.653306 0.0510979 9.8210e-02 9.5170e-01 insignificant 6.2955e-01 1.0000e+00 insignificant 3.7051e-01 8.8685e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0148569 6.7908e-01 insignificant 1.0000e+00 insignificant 0.7407668 0.7587769 -0.02875214 8 0.735508 0.805340 -0.06983158 9.9045e-01 3.7427e-02 weaklyHypometh 1.0000e+00 7.1974e-01 insignificant 9.9214e-01 9.1363e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0682726 3.7299e-02 weaklyHypometh 0.714725 insignificant 0.7752603 0.7243867 0.06175651 8 0.690399 0.6533065 0.0370923 1.3445e-02 9.9199e-01 weaklyHypermeth 1.1491e-01 1.0000e+00 insignificant 2.9519e-02 9.9827e-01 weaklyHypermeth 2.8384e-01 1.00000000 insignificant 0.0507667 2.8836e-01 insignificant 1.0000e+00 insignificant 0.7771605 0.7587769 1.0157e-03 8 0.722852 0.8053398 -0.08248751 8.3954e-01 3.2827e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.5901e-01 5.7784e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0323628 0.44875945 insignificant 1.000000 insignificant 0.7250362 0.7587769 -0.05710260 8 0.681180 0.805340 -0.1241594 9.9964e-01 1.6016e-01 insignificant 1.0000e+00 9.9029e-01 insignificant 9.9667e-01 2.1409e-01 insignificant 1.00000000 1.0000e+00 insignificant -0.0831295 5.2909e-02 insignificant 5.3732e-01 insignificant chr7 75759235 75760235 27199 SRRM3 ENSG00000177679 0.698632 328 7 0.5607310 250 7 0.5011182 170 7 0.781119 226 7 0.727287 152 8 0.654484 433 7 0.556346 209 7 0.523518 219 7 0.512960 201 7 0.5221106 115 6 0.681216 285 7 0.4410516 97 5 0.6042804 182 6 0.5844370 118 7 0.64267852 156 6 0.624257 99 6 0.657352 1965 6 0.4660436 325 7 0.694850 183 7 0.590073 318 7 0.690155 92 8 0.674006 89 6 0.609231 169 7 0.7077440 135 8 0.516686 160 7 0.5497932 285 7 0.504686 139 7 0.5751905 88 5 0.669150 141 5 0.6612526 253 7 0.592832 261 7 0.6411778 364 8 0.2114807 261 7 0.223864 187 7 0.37148962 317 7 0.5773810 86 6 0.223070 204 7 0.3045178 287 7 0.6076180 210 6 0.7884535 207 7 0.6186700 208 7 0.507135 210 7 0.7082395 207 7 0.699140 0.6544086 0.6109232 0.8054872 0.8297777 0.754235 0.6673675 0.7532512 0.668566 0.7459000 0.698411 0.6665467 0.7417576 0.7954774 0.6918680 0.5515013 0.7414170 0.6530232 0.67193310 0.7687081 0.875958 0.7157218 0.733794 0.7023216 0.6543763 0.7773655 0.575586 0.6551779 0.693273 0.7632569 0.7522671 0.7807681 0.2923107 0.2649779 0.2685062 0.5924908 0.317543 0.2699654 0.7729120 0.8108729 0.6948121 0.6728724 0.7661426 6 0.7577516 0.7309108 -1.4720e-02 7 0.540872 0.536986 0.00388598 6.7040e-01 2.4471e-01 insignificant 1.000000 1.0000e+00 insignificant 0.9300925 0.27606478 insignificant 1 1.00000 insignificant -0.01476483 0.6080569 insignificant 1 insignificant 0.7596010 0.2087994 0.5028773 7 0.584361 0.264903 0.3194581 2.6990e-38 8.5557e-01 hypermethylated 2.4537e-36 1.0000e+00 hypermethylated 9.3045e-07 8.5810e-01 hypermethylated 2.9077e-05 1.0000e+00 hypermethylated 0.2825935 3.1582e-03 weaklyHypermeth 6.5814e-02 weaklyHypermeth 0.7612065 0.7571977 -0.00530788 7 0.677181 0.560435 0.11674688 6.1389e-01 4.6965e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.3279e-01 4.5306e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0447958 4.2444e-01 insignificant 1.000000 insignificant 0.7332718 0.2087994 0.51332307 7 0.585803 0.2649025 0.3209006 1.7640e-33 9.8409e-01 hypermethylated 1.6037e-31 1.0000e+00 hypermethylated 7.6300e-07 9.9436e-01 hypermethylated 3.0520e-05 1.00000000 hypermethylated 0.2973583 2.5072e-03 weaklyHypermeth 5.3344e-02 weaklyHypermeth 0.7384830 0.7571977 -1.0790e-03 7 0.671537 0.5604346 0.11110260 2.6329e-01 7.2781e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.6116e-01 8.6481e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0300310 0.58474639 insignificant 1.000000 insignificant 0.2089888 0.7571977 -0.50880753 7 0.286733 0.560435 -0.2737019 9.3318e-01 1.4690e-17 hypomethylated 1.0000e+00 1.2241e-15 hypomethylated 9.6930e-01 3.8773e-04 hypomethylated 1.00000000 1.1404e-02 hypomethylated -0.3273893 1.8092e-03 weaklyHypometh 5.6538e-02 weaklyHypometh chr7 75762935 75763935 27202 SRRM3 ENSG00000177679 0.825497 188 6 0.8330744 332 10 0.6763441 91 6 0.810376 406 6 0.703426 138 8 0.790289 244 6 0.644492 130 6 0.797763 169 6 0.578585 69 6 0.7647243 83 6 0.739533 504 10 0.6679654 41 3 0.7614583 94 6 0.6713607 101 6 0.80184982 86 6 0.800926 31 2 0.832982 1375 3 0.6916100 123 3 0.769228 126 6 0.835792 136 6 0.747289 64 4 1.000000 43 3 0.899354 162 3 0.7382576 87 6 0.818712 205 3 0.8147411 343 6 0.798512 78 5 0.7086379 74 3 0.706192 151 6 0.8637626 311 10 0.804531 285 8 0.8178287 284 6 0.8612825 177 8 0.689570 120 6 0.70031997 131 8 0.8437500 24 0 0.581085 152 3 0.8406283 344 6 0.7687033 304 6 0.8627509 366 6 0.8895779 529 6 0.645875 74 6 0.8134387 431 6 0.844842 0.7964834 0.6702705 0.9238643 0.6733439 0.794504 0.6938403 0.7340419 0.647702 0.7521734 0.883912 0.6648032 0.6996257 0.7306350 0.7349402 0.8184679 0.9563225 0.7852293 0.81524114 0.7860921 0.766286 0.9648656 0.805736 0.7619437 0.9012316 0.8420366 0.727753 0.8207884 0.750337 0.8425170 0.8474852 0.8206979 0.7657370 0.7824591 0.5153680 0.6826172 0.675741 0.8808074 0.8775319 0.8930592 0.9249341 0.7554087 0.8858310 3 0.8603089 0.8279828 3.4668e-02 6 0.780286 0.771277 0.00900892 6.2476e-01 5.5854e-01 insignificant 1.000000 1.0000e+00 insignificant 0.9987616 0.27393101 insignificant 1 1.00000 insignificant -0.05995443 0.0539408 insignificant 1 insignificant 0.8605381 0.7985232 0.0576991 6 0.803010 0.836435 -0.0334248 5.7566e-01 8.3872e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 8.8476e-01 2.3941e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0029089 9.5456e-01 insignificant 1.0000e+00 insignificant 0.8605381 0.8955399 -0.02703390 6 0.803010 0.844745 -0.04173500 9.5367e-01 2.5132e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6425e-01 6.2507e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0462054 3.5907e-01 insignificant 1.000000 insignificant 0.8282974 0.7985232 0.02900289 6 0.825533 0.8364349 -0.0109021 7.2072e-01 2.8381e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.4594e-01 6.8524e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0570456 3.0641e-01 insignificant 1.0000e+00 insignificant 0.8282974 0.8955399 -6.1146e-02 6 0.825533 0.8447451 -0.01921237 9.7624e-01 4.4893e-02 weaklyHypometh 1.0000e+00 9.3527e-01 insignificant 9.0170e-01 3.2341e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0137490 0.78856569 insignificant 1.000000 insignificant 0.7985232 0.8955399 -0.08184250 6 0.836435 0.844745 -0.0083102 6.7990e-01 4.6541e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.1127e-01 3.0004e-01 insignificant 1.00000000 1.0000e+00 insignificant -0.0432966 5.0948e-01 insignificant 1.0000e+00 insignificant chr7 75803535 75804535 27206 HSPB1 ENSG00000106211 0.666499 142 5 0.5528945 104 6 0.5500000 36 5 0.665582 145 5 0.720000 27 5 0.678673 142 5 0.766667 37 2 0.583992 77 5 0.633333 24 3 0.4259259 30 3 0.894278 120 5 0.5000000 2 0 0.5530303 42 5 0.5762472 42 5 0.81250000 35 5 0.517857 27 2 0.500000 8 0 0.4919089 178 5 0.738095 65 2 0.478410 120 5 0.744444 21 1 0.600000 5 0 0.655983 71 5 0.5265306 34 5 0.674493 62 5 0.5876218 101 6 0.616667 50 5 0.5625000 11 0 0.580688 83 5 0.4670330 95 6 0.669019 113 5 0.5798611 96 5 0.6202990 85 5 0.545584 80 5 0.34206349 98 5 1.0000000 8 0 0.631966 61 5 0.6083333 105 5 0.5833333 116 5 0.5787833 142 5 0.7897989 166 5 0.816450 86 5 0.6111111 84 5 0.799814 0.6710041 0.5423077 0.6469625 0.7271795 0.693576 0.7743590 0.6919185 0.629670 0.5538462 0.830278 0.5631605 0.6766900 0.7132784 0.7634615 0.6005495 0.6213140 0.7096280 0.82692308 0.6535681 0.773333 0.6000000 0.775345 0.5463736 0.6733779 0.6970580 0.610256 0.6538462 0.680830 0.6573964 0.6680291 0.7128205 0.6596821 0.6573307 0.6010989 0.7067608 0.624576 0.5600000 0.6897436 0.6955517 0.7851348 0.7910090 0.7299145 0 0.7362794 0.7102426 7.6166e-03 5 0.606214 0.527101 0.07911356 5.0781e-01 8.3523e-01 insignificant 1.000000 1.0000e+00 insignificant 0.6368399 0.88448294 insignificant 1 1.00000 insignificant 0.00989131 0.7798411 lowCoverage 1 lowCoverage 0.7360913 0.6704805 0.0712627 5 0.562460 0.498954 0.0635064 3.9346e-02 9.9272e-01 weaklyHypermeth 2.8931e-01 1.0000e+00 insignificant 3.1186e-01 9.8891e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0094130 9.2130e-01 lowCoverage 1.0000e+00 lowCoverage 0.7386282 0.8215488 -0.04597157 5 0.600635 0.622070 -0.02143505 8.9127e-01 6.0590e-02 insignificant 1.0000e+00 9.1803e-01 insignificant 8.8812e-01 1.2800e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0606007 3.4394e-01 lowCoverage 1.000000 lowCoverage 0.7108108 0.6704805 0.06303475 5 0.530112 0.4989540 0.0311580 4.1518e-02 9.5802e-01 weaklyHypermeth 3.0754e-01 1.0000e+00 insignificant 3.5865e-01 9.4876e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0193043 8.3706e-01 lowCoverage 1.0000e+00 lowCoverage 0.7131148 0.8215488 -5.1034e-02 5 0.586835 0.6220701 -0.03523543 9.6514e-01 3.9511e-02 weaklyHypometh 1.0000e+00 8.7408e-01 insignificant 9.7717e-01 9.4433e-02 insignificant 1.0000e+00 1.000000 insignificant -0.0704920 0.26418239 lowCoverage 1.000000 lowCoverage 0.6744186 0.8215488 -0.11714144 5 0.526209 0.622070 -0.0958613 9.9990e-01 2.2152e-03 weaklyHypometh 1.0000e+00 2.6005e-02 weaklyHypometh 9.9922e-01 8.2523e-02 insignificant 1.00000000 6.6018e-01 insignificant -0.0511878 6.2804e-01 lowCoverage 1.0000e+00 lowCoverage chr7 75846835 75847835 27214 ENSG00000213548 0.010459 521 17 0.0557692 299 17 0.0019608 367 17 0.053874 614 17 0.014115 374 13 0.025055 842 18 0.013261 413 17 0.015830 381 17 0.026187 405 17 0.0047619 398 17 0.014664 484 17 0.0069444 302 17 0.0047847 333 17 0.0069444 196 8 0.00597744 496 17 0.001548 235 13 0.036012 99 10 0.0057586 844 17 0.021941 490 17 0.055017 754 18 0.024934 173 13 0.020931 276 14 0.031216 438 17 0.0075188 171 17 0.000000 233 13 0.0069717 505 17 0.041003 541 18 0.0287500 184 15 0.000000 439 17 0.0054749 481 17 0.011755 525 17 0.0089246 734 17 0.0092593 316 17 0.032776 629 17 0.00000000 119 4 0.0000000 91 9 0.162746 253 14 0.0020284 626 17 0.0059252 744 17 0.0094740 687 17 0.0044444 466 17 0.008421 669 17 0.0099812 757 17 0.010452 0.0059412 0.0024390 0.0043829 0.0155068 0.009241 0.0079116 0.0112779 0.017354 0.0069686 0.017956 0.0091463 0.0022173 0.0090495 0.0092976 0.0027813 0.0206847 0.0068202 0.01727975 0.0039892 0.031243 0.0094036 0.012863 0.0025552 0.0000000 0.0054966 0.011244 0.0209350 0.000000 0.0042481 0.0086845 0.0092572 0.0056911 0.0029411 0.0067754 0.0025340 0.029857 0.0014017 0.0058061 0.0055315 0.0058537 0.0065041 0.0076467 12 0.0087094 0.0095745 2.6755e-05 17 0.039562 0.020177 0.01938464 4.4437e-01 3.5578e-01 insignificant 1.000000 1.0000e+00 insignificant 0.6880482 0.81558445 insignificant 1 1.00000 insignificant 0.00342006 0.5426692 insignificant 1 insignificant 0.0089296 0.0083579 0.0025207 17 0.088295 0.123094 -0.0347982 7.2752e-01 7.5461e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.3458e-01 6.2868e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0154250 5.8410e-01 insignificant 1.0000e+00 insignificant 0.0086002 0.0063196 0.00280978 17 0.019397 0.007124 0.01227286 7.3957e-01 9.9516e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.1223e-01 9.8768e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0113940 1.1637e-02 weaklyHypermeth 0.375393 insignificant 0.0095745 0.0069034 0.00190692 17 0.020177 0.0871977 -0.0670208 6.9810e-01 4.1768e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.5886e-01 7.9768e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0188451 5.0656e-01 insignificant 1.0000e+00 insignificant 0.0095826 0.0063215 2.7306e-03 17 0.022301 0.0074989 0.01480194 6.5377e-01 9.3748e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.1241e-01 9.5538e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0079740 0.06861472 insignificant 1.000000 insignificant 0.0069068 0.0063196 0.00010539 17 0.083224 0.007124 0.0761003 9.9450e-01 9.4680e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8904e-01 9.6864e-01 insignificant 1.00000000 1.0000e+00 insignificant 0.0268190 3.5241e-01 insignificant 1.0000e+00 insignificant chr7 75912135 75913135 27221 ZP3 ENSG00000188372 0.777202 106 6 0.7971312 111 6 0.6780830 105 6 0.539305 94 5 0.719327 157 6 0.718307 110 6 0.806743 177 5 0.722435 136 6 0.849284 103 6 0.8677035 98 5 0.784166 255 6 0.7332503 100 5 0.8956553 112 6 0.6059524 24 4 0.82484737 98 6 0.727208 124 4 0.959893 92 3 0.5845353 79 6 0.669418 104 3 0.799568 96 6 0.902564 40 5 0.751569 41 2 0.730498 103 5 0.6584135 94 6 0.752522 53 5 0.6274277 147 6 0.827652 60 6 0.9305556 28 3 0.821032 90 6 0.8043595 145 6 0.632337 126 6 0.7272527 125 6 0.5452381 131 6 0.643439 104 6 0.69321060 101 6 0.8333333 6 0 0.616892 93 5 0.6303069 118 6 0.7233270 82 5 0.6975692 103 5 0.5831353 101 5 0.789744 53 3 0.6051037 85 5 0.759711 0.8110077 0.7079884 0.6616511 0.8537604 0.673343 0.8296160 0.7540372 0.876910 0.8788192 0.805254 0.7019467 0.8604672 0.7182477 0.8679111 0.8121122 0.9402974 0.7267167 0.74115305 0.7265919 0.903652 0.6532726 0.726531 0.7325474 0.7047017 0.7798176 0.795042 0.9143836 0.802886 0.7800374 0.7519000 0.6497486 0.6419815 0.6694322 0.8277751 0.8904110 0.765692 0.7392587 0.7286153 0.7200560 0.6341621 0.7321391 0.5863087 2 0.8088558 0.7483317 5.1680e-02 6 0.655872 0.626954 0.02891853 3.9771e-02 1.4243e-01 weaklyHypermeth 1.000000 1.0000e+00 insignificant 0.5229498 0.27485820 insignificant 1 1.00000 insignificant -0.01084800 0.7710051 insignificant 1 insignificant 0.8092105 0.7160940 0.0772997 6 0.749568 0.618620 0.1309483 5.9498e-05 9.3760e-01 weaklyHypermeth 7.5314e-04 1.0000e+00 weaklyHypermeth 3.9631e-02 9.6002e-01 weaklyHypermeth 3.9631e-01 1.0000e+00 insignificant 0.0925973 7.6551e-02 lowCoverage 8.3957e-01 lowCoverage 0.8092105 0.7240566 0.06845050 5 0.749568 0.593972 0.15559661 1.3943e-04 5.1229e-01 weaklyHypermeth 8.7141e-03 1.0000e+00 weaklyHypermeth 1.5272e-01 4.4874e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0732249 1.4481e-01 lowCoverage 1.000000 lowCoverage 0.7495220 0.7160940 0.02318603 6 0.668900 0.6186201 0.0502795 2.9702e-04 9.6861e-01 weaklyHypermeth 3.8574e-03 1.0000e+00 weaklyHypermeth 1.9650e-02 9.4769e-01 weaklyHypermeth 2.0904e-01 1.00000000 insignificant 0.1034453 5.9469e-02 lowCoverage 6.4640e-01 lowCoverage 0.7495220 0.7240566 5.3161e-02 5 0.668900 0.5939718 0.07492781 3.8306e-03 5.1463e-01 weaklyHypermeth 1.5961e-01 1.0000e+00 insignificant 1.0763e-01 6.8922e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0840729 0.11230688 lowCoverage 1.000000 lowCoverage 0.7160940 0.7240566 0.02232937 5 0.618620 0.593972 0.0246483 2.4871e-01 1.3753e-01 insignificant 1.0000e+00 8.7597e-01 insignificant 3.9292e-01 2.8766e-01 insignificant 1.00000000 1.0000e+00 insignificant -0.0193725 7.3340e-01 lowCoverage 1.0000e+00 lowCoverage chr7 75912235 75913235 27222 ZP3 ENSG00000188372 0.777202 106 6 0.7971312 111 6 0.6780830 105 6 0.539305 94 5 0.719327 157 6 0.718307 110 6 0.806743 177 5 0.722435 136 6 0.849284 103 6 0.8677035 98 5 0.784166 255 6 0.7332503 100 5 0.8956553 112 6 0.6059524 24 4 0.82484737 98 6 0.727208 124 4 0.959893 92 3 0.5845353 79 6 0.669418 104 3 0.799568 96 6 0.902564 40 5 0.751569 41 2 0.730498 103 5 0.6584135 94 6 0.752522 53 5 0.6274277 147 6 0.827652 60 6 0.9305556 28 3 0.821032 90 6 0.8043595 145 6 0.632337 126 6 0.7272527 125 6 0.5452381 131 6 0.643439 104 6 0.69321060 101 6 0.8333333 6 0 0.616892 93 5 0.6303069 118 6 0.7233270 82 5 0.6975692 103 5 0.5831353 101 5 0.789744 53 3 0.6051037 85 5 0.759711 0.8110077 0.7079884 0.6616511 0.8537604 0.673343 0.8296160 0.7540372 0.876910 0.8788192 0.805254 0.7019467 0.8604672 0.7182477 0.8679111 0.8121122 0.9402974 0.7267167 0.74115305 0.7265919 0.903652 0.6532726 0.726531 0.7325474 0.7047017 0.7798176 0.795042 0.9143836 0.802886 0.7800374 0.7519000 0.6497486 0.6419815 0.6694322 0.8277751 0.8904110 0.765692 0.7392587 0.7286153 0.7200560 0.6341621 0.7321391 0.5863087 2 0.8088558 0.7483317 5.1680e-02 6 0.655872 0.626954 0.02891853 3.9771e-02 1.4243e-01 weaklyHypermeth 1.000000 1.0000e+00 insignificant 0.5229498 0.27485820 insignificant 1 1.00000 insignificant -0.01084800 0.7710051 insignificant 1 insignificant 0.8092105 0.7160940 0.0772997 6 0.749568 0.618620 0.1309483 5.9498e-05 9.3760e-01 weaklyHypermeth 7.5314e-04 1.0000e+00 weaklyHypermeth 3.9631e-02 9.6002e-01 weaklyHypermeth 3.9631e-01 1.0000e+00 insignificant 0.0925973 7.6551e-02 lowCoverage 8.3957e-01 lowCoverage 0.8092105 0.7240566 0.06845050 5 0.749568 0.593972 0.15559661 1.3943e-04 5.1229e-01 weaklyHypermeth 8.7141e-03 1.0000e+00 weaklyHypermeth 1.5272e-01 4.4874e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0732249 1.4481e-01 lowCoverage 1.000000 lowCoverage 0.7495220 0.7160940 0.02318603 6 0.668900 0.6186201 0.0502795 2.9702e-04 9.6861e-01 weaklyHypermeth 3.8574e-03 1.0000e+00 weaklyHypermeth 1.9650e-02 9.4769e-01 weaklyHypermeth 2.0904e-01 1.00000000 insignificant 0.1034453 5.9469e-02 lowCoverage 6.4640e-01 lowCoverage 0.7495220 0.7240566 5.3161e-02 5 0.668900 0.5939718 0.07492781 3.8306e-03 5.1463e-01 weaklyHypermeth 1.5961e-01 1.0000e+00 insignificant 1.0763e-01 6.8922e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0840729 0.11230688 lowCoverage 1.000000 lowCoverage 0.7160940 0.7240566 0.02232937 5 0.618620 0.593972 0.0246483 2.4871e-01 1.3753e-01 insignificant 1.0000e+00 8.7597e-01 insignificant 3.9292e-01 2.8766e-01 insignificant 1.00000000 1.0000e+00 insignificant -0.0193725 7.3340e-01 lowCoverage 1.0000e+00 lowCoverage chr7 75979135 75980135 27225 ENSG00000135180 0.887643 230 10 0.8014088 257 10 0.8233188 276 10 0.974410 234 5 0.813351 231 10 0.850404 363 10 0.832227 248 10 0.901527 229 10 0.888171 236 10 0.8525235 253 10 0.900202 393 11 0.7844118 192 9 0.9188610 294 9 0.9801834 53 3 0.89036687 248 10 0.665392 72 5 0.810582 80 8 0.8612950 327 8 0.920952 268 10 0.869189 266 11 0.764905 116 8 0.788304 114 6 0.912097 217 10 0.9047865 125 8 0.836662 173 6 0.9352548 298 10 0.868282 178 10 0.8447557 120 8 0.894234 239 11 0.8191227 293 10 0.933410 254 9 0.9363682 319 11 0.6578697 244 10 0.828201 207 9 0.79136192 178 9 0.8693473 105 4 0.805830 141 8 0.8976646 290 10 0.9296314 240 7 0.9802309 264 10 0.9730925 196 5 0.898028 212 7 0.8954203 226 7 0.946368 0.7853823 0.8288964 0.9485468 0.8284121 0.880892 0.7679035 0.8817659 0.812500 0.8785810 0.859297 0.8348078 0.8987751 0.9440541 0.8513918 0.7692207 0.7847485 0.8510179 0.89011922 0.8315726 0.900462 0.8248690 0.904274 0.9396468 0.9145479 0.9041584 0.893417 0.8720697 0.868073 0.8938879 0.8743314 0.8803344 0.7108357 0.8344019 0.8832173 0.8506155 0.802649 0.8882203 0.8879295 0.9436455 0.9400602 0.8660216 0.9279785 4 0.8660903 0.8908422 -2.9929e-02 10 0.812066 0.820860 -0.00879463 9.5867e-01 4.1442e-02 weaklyHypometh 1.000000 1.0000e+00 insignificant 0.9700560 0.03371435 weaklyHypometh 1 1.00000 insignificant -0.00852740 0.7162733 insignificant 1 insignificant 0.8665259 0.8394850 0.0332888 10 0.880456 0.762306 0.1181499 5.7000e-04 1.9799e-01 weaklyHypermeth 6.5517e-03 1.0000e+00 weaklyHypermeth 1.0397e-01 4.6333e-01 insignificant 7.9974e-01 1.0000e+00 insignificant 0.0529420 2.0079e-01 insignificant 1.0000e+00 insignificant 0.8663011 0.9067722 -0.04998063 7 0.866204 0.928324 -0.06212013 9.9999e-01 1.2705e-05 weaklyHypometh 1.0000e+00 2.1650e-03 weaklyHypometh 1.0000e+00 2.8446e-05 weaklyHypometh 1.0000e+00 9.4818e-03 weaklyHypometh -0.0739595 1.0080e-02 weaklyHypometh 0.347586 insignificant 0.8914824 0.8394850 0.05804681 10 0.890507 0.7623063 0.1282009 1.6456e-04 8.0972e-01 weaklyHypermeth 2.2855e-03 1.0000e+00 weaklyHypermeth 9.7774e-03 9.3704e-01 weaklyHypermeth 1.1669e-01 1.00000000 insignificant 0.0614693 1.4817e-01 insignificant 1.0000e+00 insignificant 0.8911620 0.9066901 -3.0834e-02 7 0.866698 0.9232039 -0.05650627 9.9939e-01 5.1062e-03 weaklyHypometh 1.0000e+00 2.0425e-01 insignificant 9.9992e-01 2.0538e-03 weaklyHypometh 1.0000e+00 0.324824 insignificant -0.0654321 0.02266979 weaklyHypometh 0.690416 insignificant 0.8402062 0.9074074 -0.07382818 7 0.820945 0.955758 -0.1348128 9.9738e-01 1.0838e-05 weaklyHypometh 1.0000e+00 2.6435e-04 weaklyHypometh 9.9871e-01 8.6516e-04 weaklyHypometh 1.00000000 2.1101e-02 weaklyHypometh -0.1269015 1.2263e-02 weaklyHypometh 1.9465e-01 insignificant chr7 76073535 76074535 27233 ENSG00000205485 0.544820 108 6 0.6107767 173 9 0.4772062 114 7 0.620031 127 7 0.555426 118 9 0.521889 221 9 0.534937 111 5 0.787170 119 7 0.485182 116 8 0.6176471 65 4 0.543064 257 9 0.6929487 81 4 0.6707934 109 6 0.8203463 27 3 0.77793340 115 6 0.616080 135 4 0.489085 710 6 0.5446312 115 5 0.909970 58 4 0.518578 149 6 0.483077 73 7 0.800000 24 3 0.559549 162 8 0.7701049 49 3 0.554103 85 7 0.5141770 185 9 0.621524 80 5 0.7481685 44 3 0.582077 116 6 0.4541318 157 9 0.657356 177 9 0.6447908 243 9 0.3768928 154 9 0.374206 81 6 0.43740696 132 6 0.5000000 48 4 0.517596 117 9 0.5545110 170 9 0.6160128 148 8 0.5677176 140 9 0.5446331 148 9 0.700000 73 9 0.5540717 161 9 0.695264 0.7250872 0.6897058 0.6972281 0.7388013 0.664952 0.6276949 0.8394603 0.652968 0.7374890 0.618925 0.7679807 0.7018088 0.8067485 0.8297065 0.7906755 0.6970895 0.6393035 0.89045842 0.6573084 0.789647 0.7552382 0.665957 0.8263490 0.6354258 0.6972942 0.782075 0.8413454 0.692856 0.6542328 0.7134612 0.6735637 0.6332431 0.5445451 0.7053539 0.8403165 0.620157 0.7031886 0.6933089 0.6907591 0.6280181 0.7731343 0.6800121 3 0.6204163 0.6659498 5.1136e-03 9 0.507718 0.572348 -0.06462963 1.9213e-01 6.6126e-03 inconclusive 1.000000 1.0000e+00 insignificant 0.6369428 0.51874812 insignificant 1 1.00000 insignificant 0.00117089 0.9783340 insignificant 1 insignificant 0.6212272 0.5299145 0.1050064 9 0.533252 0.467869 0.0653827 2.1965e-11 4.5614e-01 weaklyHypermeth 5.4912e-10 1.0000e+00 weaklyHypermeth 8.6357e-03 9.9603e-01 weaklyHypermeth 1.1215e-01 1.0000e+00 insignificant 0.1568237 2.0416e-03 weaklyHypermeth 4.4383e-02 weaklyHypermeth 0.6214783 0.6761194 -0.01348833 9 0.572148 0.528447 0.04370067 4.7227e-01 2.8990e-02 weaklyHypometh 1.0000e+00 5.9162e-01 insignificant 7.0610e-01 3.7977e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0204388 6.1621e-01 insignificant 1.000000 insignificant 0.6661850 0.5299145 0.10748104 9 0.553202 0.4678695 0.0853322 1.1979e-07 9.3259e-01 weaklyHypermeth 2.7546e-06 1.0000e+00 weaklyHypermeth 1.1412e-03 9.8557e-01 weaklyHypermeth 1.8915e-02 1.00000000 weaklyHypermeth 0.1556528 3.6760e-03 weaklyHypermeth 7.0131e-02 weaklyHypermeth 0.6671470 0.6761194 7.1278e-05 9 0.590435 0.5284471 0.06198771 6.3987e-01 2.2879e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.5484e-01 5.1300e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0192679 0.66416156 insignificant 1.000000 insignificant 0.5299145 0.6771300 -0.16581224 9 0.467869 0.576488 -0.1086183 4.0618e-01 1.9350e-09 weaklyHypometh 1.0000e+00 7.7401e-08 weaklyHypometh 7.4882e-01 3.5994e-03 weaklyHypometh 1.00000000 6.7913e-02 weaklyHypometh -0.1363849 1.0219e-02 weaklyHypometh 1.7032e-01 insignificant chr7 76997235 76998235 27252 ENSG00000209233 0.723613 148 6 0.5851040 132 7 0.7040056 67 4 0.865814 106 6 0.666667 9 0 0.825819 173 6 0.750000 28 3 0.845516 66 5 0.575000 29 3 0.7500000 20 0 0.569207 133 5 1.0000000 3 0 0.7018519 32 3 0.5777778 11 1 0.77500000 25 2 0.700000 8 0 0.600000 11 1 0.7410996 168 7 0.580769 44 3 0.652052 115 5 0.750000 9 0 0.777778 10 0 0.522564 94 5 0.4204545 33 3 0.583333 10 0 0.7541667 102 6 0.500000 6 0 0.7916667 14 0 0.738636 37 3 0.5952381 97 5 0.532051 111 6 0.5964329 140 5 0.6293290 48 5 0.480284 44 3 0.68154762 46 5 NA 0 0 0.450000 17 0 0.6215488 90 5 0.8082126 201 6 0.8098739 174 7 0.7896209 140 7 0.683334 127 6 0.8244904 209 7 0.630037 0.4158918 0.5576923 0.8287546 0.6666667 0.765734 0.4615385 0.6739927 0.453846 0.6346154 0.685291 1.0000000 0.4487179 0.6051282 0.6666667 0.5769231 0.5692308 0.7213287 0.74556213 0.5239343 0.807692 0.7301043 0.724852 0.5472028 0.5128205 0.6442308 NA 0.8461538 0.674825 0.6336996 0.5894970 0.6336538 0.6171329 0.4998757 0.5153846 NA 0.442308 0.7517483 0.6646943 0.7410256 0.7371795 0.6132479 0.7337858 0 0.7131024 0.6458967 4.2488e-02 5 0.765087 0.637610 0.12747676 2.4505e-05 9.4859e-01 weaklyHypermeth 0.024505 1.0000e+00 weaklyHypermeth 0.0687494 0.87993474 insignificant 1 1.00000 insignificant 0.07927131 0.0905585 lowCoverage 1 lowCoverage 0.7128862 0.6204082 0.0407130 3 0.738986 0.552093 0.1868931 1.6821e-04 9.4486e-01 lowCoverage 2.0266e-03 1.0000e+00 lowCoverage 7.7336e-02 9.8158e-01 lowCoverage 6.4447e-01 1.0000e+00 lowCoverage 0.1369228 3.4693e-02 lowCoverage 4.4479e-01 lowCoverage 0.7121097 0.7955347 -0.06116814 6 0.725635 0.795362 -0.06972699 9.9515e-01 1.9179e-02 weaklyHypometh 1.0000e+00 4.6779e-01 insignificant 8.7667e-01 5.5175e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0736415 6.3140e-02 lowCoverage 0.971380 lowCoverage 0.6457055 0.6204082 0.00366366 3 0.634382 0.5520926 0.0822893 2.0241e-01 6.0527e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 3.1110e-01 8.8031e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 0.0576515 3.4649e-01 lowCoverage 1.0000e+00 lowCoverage 0.6427457 0.7955347 -9.4625e-02 5 0.582301 0.7953617 -0.21306113 9.9304e-01 4.8756e-13 weaklyHypometh 1.0000e+00 4.8756e-10 weaklyHypometh 8.6042e-01 1.2252e-02 weaklyHypometh 1.0000e+00 0.720709 insignificant -0.1529129 0.00380765 lowCoverage 0.265788 lowCoverage 0.6213992 0.7955347 -0.09693286 3 0.566976 0.795362 -0.2283855 9.6549e-01 1.3904e-06 lowCoverage 1.0000e+00 3.9725e-05 lowCoverage 9.9718e-01 1.3526e-02 lowCoverage 1.00000000 1.6907e-01 lowCoverage -0.2105644 6.0591e-03 lowCoverage 1.1881e-01 lowCoverage chr7 77218135 77219135 27256 RSBN1L ENSG00000187257 0.862684 65 5 0.6561698 106 5 0.7309524 24 2 0.855736 93 5 0.795000 43 5 0.825914 102 5 0.562500 33 2 0.882828 46 5 0.942857 24 2 0.6190476 19 2 0.826117 140 5 0.7321429 15 2 0.6051948 36 2 0.9072727 24 2 0.61904762 22 2 0.866667 9 0 1.000000 2 0 0.9200000 58 4 0.900000 14 0 0.858608 45 5 0.952381 37 5 0.971429 29 3 0.699074 38 5 1.0000000 16 0 0.898901 54 5 0.8422889 103 5 0.713170 48 4 0.1785714 14 1 0.962500 45 3 0.6685606 73 5 0.918655 127 5 0.8964604 78 5 0.9360000 91 5 0.905455 63 5 0.50000000 8 0 0.7500000 14 0 0.945378 59 5 0.8955080 68 5 0.9818182 55 5 0.9571429 85 5 0.8497070 58 5 0.822222 12 2 0.8944978 116 5 0.814194 0.6761046 0.7565856 0.7972411 0.7446809 0.813784 0.8484525 0.8525682 0.902736 0.7963526 0.838163 0.7724647 0.7400387 0.8421663 0.6899696 0.7730496 0.8221549 0.8638298 0.82978723 0.8373471 0.902736 0.9848024 0.784279 1.0000000 0.8459200 0.8264632 0.742112 0.4255319 0.936170 0.9056657 0.8922429 0.8598194 0.8910638 0.9029014 0.6365627 0.7500000 0.907027 0.8359085 0.9690522 0.9381966 0.8615463 0.8054132 0.8684006 0 0.8108696 0.8806647 -6.1199e-02 5 0.633122 0.687159 -0.05403639 9.9867e-01 3.3444e-02 weaklyHypometh 1.000000 1.0000e+00 insignificant 0.9751862 0.24408418 insignificant 1 1.00000 insignificant -0.01006228 0.8904864 lowCoverage 1 lowCoverage 0.8150985 0.8943894 -0.0798067 5 0.819705 0.904222 -0.0845170 9.9862e-01 3.9024e-03 weaklyHypometh 1.0000e+00 2.4390e-01 insignificant 9.7566e-01 2.3900e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0236198 7.6577e-01 lowCoverage 1.0000e+00 lowCoverage 0.8150985 0.9141104 -0.09163779 5 0.819705 0.911261 -0.09155616 9.9940e-01 2.3617e-03 weaklyHypometh 1.0000e+00 1.0268e-01 insignificant 9.5661e-01 2.5657e-02 weaklyHypometh 1.0000e+00 7.1270e-01 insignificant -0.1026406 2.9897e-02 lowCoverage 0.649942 lowCoverage 0.8870229 0.8943894 -0.02178044 5 0.882022 0.9042218 -0.0221994 8.7114e-01 3.9772e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 6.7295e-01 6.2051e-02 insignificant 1.0000e+00 1.00000000 insignificant -0.0135575 8.9054e-01 lowCoverage 1.0000e+00 lowCoverage 0.8870229 0.9141104 -2.8575e-02 5 0.882022 0.9112609 -0.02923854 9.5590e-01 2.4819e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.1656e-01 3.9134e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0925783 0.22277520 lowCoverage 1.000000 lowCoverage 0.8943894 0.9141104 -0.01197269 5 0.904222 0.911261 -0.0070391 2.8703e-01 6.9447e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.3874e-01 4.6896e-01 insignificant 1.00000000 1.0000e+00 insignificant -0.0790208 3.3945e-01 lowCoverage 1.0000e+00 lowCoverage chr7 90708035 90709035 27487 ENSG00000220307 0.760685 206 6 0.8023599 146 4 0.7190430 101 4 0.734764 125 7 0.925000 22 2 0.776640 287 8 0.872024 72 4 0.808500 82 4 0.857226 79 4 0.8782051 55 4 0.938903 101 4 0.5717105 47 3 0.8721484 70 4 0.7500000 10 1 0.89802632 84 3 0.760143 55 3 0.473720 77 3 0.6718175 109 4 0.709452 109 7 0.786511 155 6 0.912879 19 2 0.791388 50 4 0.723729 116 4 0.9427372 75 4 0.762500 30 2 0.7916429 202 9 0.882622 82 4 1.0000000 46 3 0.916880 58 4 0.7692510 214 9 0.718557 150 6 0.7461504 243 9 0.6265492 116 4 0.388666 65 4 0.36769083 84 6 0.6122596 44 4 0.768091 78 4 0.5793691 165 9 0.7069970 195 8 0.6862130 210 9 0.7589956 158 7 0.626412 134 4 0.6901323 209 8 0.894154 0.8066295 0.7697814 0.8981747 0.8606299 0.928574 0.8450506 0.7989841 0.910798 0.8646275 0.925899 0.6930999 0.9150834 0.9144617 0.9069623 0.8321678 0.7680939 0.8923558 0.88657043 0.8988381 0.866977 0.8769807 0.880392 0.9578323 0.8263780 0.9524059 0.846447 1.0000000 0.915008 0.9416366 0.9140502 0.8840275 0.7078207 0.4212584 0.5442278 0.8474712 0.829077 0.7286234 0.9094065 0.8596473 0.8474836 0.8946703 0.8944912 2 0.8370221 0.8200935 -3.1131e-02 4 0.734576 0.754759 -0.02018281 9.6410e-01 1.7084e-01 lowCoverage 1.000000 1.0000e+00 lowCoverage 0.9066372 0.18693484 lowCoverage 1 1.00000 lowCoverage -0.05151746 0.1851978 lowCoverage 1 lowCoverage 0.8372677 0.5815217 0.2156124 4 0.761119 0.508798 0.2523210 1.8030e-08 9.9992e-01 lowCoverage 3.4673e-07 1.0000e+00 lowCoverage 9.3989e-04 9.9994e-01 lowCoverage 1.5930e-02 1.0000e+00 lowCoverage 0.2212396 1.4188e-02 lowCoverage 2.2169e-01 lowCoverage 0.8370221 0.7913907 -0.00020595 4 0.734576 0.700633 0.03394297 1.5048e-01 8.2264e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 3.0472e-01 9.2305e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0845940 2.1954e-02 lowCoverage 0.510557 lowCoverage 0.8200935 0.5825771 0.24062189 4 0.754759 0.5653307 0.1894284 4.7968e-10 9.9578e-01 lowCoverage 1.4990e-08 1.0000e+00 lowCoverage 5.7695e-05 9.9179e-01 lowCoverage 1.4072e-03 1.00000000 lowCoverage 0.2727571 5.2035e-03 weaklyHypermeth 9.1290e-02 weaklyHypermeth 0.8200935 0.7913907 3.7381e-02 6 0.754759 0.7006333 0.05412578 5.8811e-03 9.8121e-01 weaklyHypermeth 2.1782e-01 1.0000e+00 insignificant 2.1769e-02 9.8132e-01 weaklyHypermeth 8.6634e-01 1.000000 insignificant 0.1361114 0.00154857 weaklyHypermeth 0.218802 insignificant 0.5825771 0.7913907 -0.20498858 4 0.565331 0.700633 -0.1353026 9.8427e-01 1.3179e-04 lowCoverage 1.0000e+00 2.1605e-03 lowCoverage 9.9634e-01 1.6240e-02 lowCoverage 1.00000000 1.8747e-01 lowCoverage -0.1366457 8.2912e-02 insignificant 7.5166e-01 insignificant chr7 92510535 92511535 27531 ENSG00000222576 0.034687 116 6 0.0000000 140 6 0.1257680 138 6 0.062299 100 6 0.077980 123 6 0.175731 140 6 0.020220 205 6 0.050654 154 6 0.027160 141 6 0.0427644 193 6 0.048566 159 6 0.0589597 93 6 0.0957231 100 6 0.0052083 105 6 0.08142964 154 6 0.057823 70 6 0.016667 19 1 0.1577778 91 6 0.141180 147 6 0.024479 106 6 0.114359 106 6 0.030104 101 6 0.113154 77 6 0.1958759 117 6 0.081824 70 5 0.1906155 166 6 0.118364 300 6 0.0374698 124 7 0.047330 252 6 0.2004352 242 6 0.029079 195 6 0.0779762 148 6 0.0333333 80 6 0.081681 135 6 0.00000000 192 5 0.1041667 28 3 0.104396 95 6 0.0062112 272 6 0.0128517 228 6 0.0306122 101 6 0.0303030 60 6 0.108383 103 6 0.1041667 59 6 0.041695 0.0000000 0.1574521 0.0565857 0.0957279 0.240861 0.0346130 0.0894443 0.043811 0.0586628 0.056211 0.0644404 0.0999279 0.0084252 0.0751677 0.0463060 0.0394542 0.0504902 0.15044539 0.0341912 0.029129 0.0323027 0.157680 0.0643382 0.0304241 0.2087600 0.013480 0.0217341 0.052780 0.2043866 0.0436923 0.0907957 0.0242647 0.0143277 0.0019118 0.1427696 0.024927 0.0081522 0.0164128 0.0401786 0.0340909 0.1037655 0.0625000 6 0.0738067 0.0858799 -1.1841e-02 6 0.071711 0.156958 -0.08524704 9.6578e-01 4.1996e-01 insignificant 1.000000 1.0000e+00 insignificant 0.9561486 0.49111417 insignificant 1 1.00000 insignificant -0.03779495 0.0984472 insignificant 1 insignificant 0.0740741 0.0199501 0.0549774 6 0.077687 0.119737 -0.0420507 3.3324e-02 9.9907e-01 weaklyHypermeth 2.5055e-01 1.0000e+00 insignificant 4.5102e-02 8.7505e-01 weaklyHypermeth 4.3401e-01 1.0000e+00 insignificant 0.0102891 6.5993e-01 insignificant 1.0000e+00 insignificant 0.0737606 0.0381125 0.03340197 6 0.043224 0.057316 -0.01409212 3.0861e-01 7.9185e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.2609e-01 8.2129e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0079905 7.4139e-01 insignificant 1.000000 insignificant 0.0861067 0.0200000 0.06530937 6 0.185496 0.1306225 0.0548730 6.2551e-02 9.9426e-01 insignificant 4.2843e-01 1.0000e+00 insignificant 3.6465e-02 9.9746e-01 weaklyHypermeth 3.2474e-01 1.00000000 insignificant 0.0480841 9.7344e-02 insignificant 9.0133e-01 insignificant 0.0859416 0.0381818 4.4696e-02 6 0.115606 0.0636845 0.05192115 6.8296e-02 9.9822e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.0042e-02 9.8586e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0457855 0.12464409 insignificant 1.000000 insignificant 0.0200250 0.0381125 -0.01860478 6 0.143685 0.057316 0.0863687 9.5331e-01 6.8667e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8993e-01 8.0751e-01 insignificant 1.00000000 1.0000e+00 insignificant -0.0022986 9.3675e-01 insignificant 1.0000e+00 insignificant chr7 95710135 95711135 27595 MIR591 ENSG00000208025 0.901952 279 6 0.9169245 146 6 0.9097243 105 6 0.885573 248 6 0.768193 64 6 0.873507 367 7 0.871383 114 6 0.856882 194 6 0.680114 98 6 0.9043831 71 5 0.826862 262 6 0.9581668 65 5 0.9581454 144 6 0.9602941 36 3 0.96316766 142 6 0.844304 61 4 0.706439 25 2 0.9230166 214 6 0.901349 182 6 0.943581 294 7 0.730394 61 6 0.841950 72 6 0.883145 175 6 0.8542125 61 6 0.915459 70 5 0.9393075 213 6 0.720124 108 6 0.8550396 77 5 0.799369 163 5 0.9640720 217 6 0.934669 223 6 0.8768306 282 7 0.8430037 149 6 0.913259 99 6 0.83833785 133 6 0.8839069 54 4 0.710544 133 6 0.7324599 206 6 0.9679388 305 6 0.9713656 298 6 0.7644851 200 6 0.938371 249 6 0.9686409 281 6 0.889008 0.8927572 0.8740191 0.9423495 0.7927836 0.917726 0.8744846 0.8981049 0.793831 0.8638188 0.909841 0.9431818 0.9495326 0.8969559 0.9493686 0.8283175 0.7414130 0.8937107 0.89319951 0.9343197 0.732213 0.8931062 0.892530 0.9095733 0.8986882 0.9246867 0.829898 0.8363792 0.926104 0.9562496 0.9290109 0.8771681 0.8663803 0.9003083 0.8765972 0.8757970 0.806057 0.8792859 0.9725289 0.9624007 0.9140316 0.9409345 0.9635666 5 0.9032465 0.9012776 3.0651e-03 6 0.890394 0.881396 0.00899828 4.5393e-01 5.4054e-01 insignificant 1.000000 1.0000e+00 insignificant 0.3343402 0.85581942 insignificant 1 1.00000 insignificant 0.01815042 0.5346907 insignificant 1 insignificant 0.9032465 0.8746770 0.0276749 6 0.890394 0.802241 0.0881535 1.8794e-03 8.5768e-01 weaklyHypermeth 1.9376e-02 1.0000e+00 weaklyHypermeth 1.7411e-02 4.6167e-01 weaklyHypermeth 2.0012e-01 1.0000e+00 insignificant 0.0574462 1.6681e-01 insignificant 1.0000e+00 insignificant 0.9032465 0.9519880 -0.04678435 6 0.890394 0.919762 -0.02936827 9.9503e-01 4.0108e-03 weaklyHypometh 1.0000e+00 1.3830e-01 insignificant 9.7709e-01 2.3480e-04 weaklyHypometh 1.0000e+00 3.3543e-02 weaklyHypometh -0.0444623 3.5024e-01 insignificant 1.000000 insignificant 0.9012776 0.8746770 0.02766074 6 0.881396 0.8022407 0.0791552 1.9793e-03 8.2198e-01 weaklyHypermeth 2.1187e-02 1.0000e+00 weaklyHypermeth 5.1081e-02 4.6095e-01 insignificant 4.2925e-01 1.00000000 insignificant 0.0392958 3.5225e-01 insignificant 1.0000e+00 insignificant 0.9012776 0.9519880 -4.8805e-02 6 0.881396 0.9197625 -0.03836654 9.6138e-01 2.0487e-03 weaklyHypometh 1.0000e+00 1.1382e-01 insignificant 9.7066e-01 2.3562e-03 weaklyHypometh 1.0000e+00 0.324824 insignificant -0.0626127 0.21561979 insignificant 1.000000 insignificant 0.8746770 0.9519880 -0.07443931 6 0.802241 0.919762 -0.1175218 9.9489e-01 1.8178e-04 weaklyHypometh 1.0000e+00 2.8854e-03 weaklyHypometh 9.8002e-01 1.6102e-03 weaklyHypometh 1.00000000 3.5623e-02 weaklyHypometh -0.1019085 8.4186e-02 insignificant 7.5166e-01 insignificant chr7 96483435 96484435 27617 DLX6 ENSG00000006377 0.016853 753 15 0.0088677 725 25 0.0059266 680 16 0.066129 470 12 0.057644 403 16 0.101768 790 16 0.011224 1001 25 0.054579 599 16 0.051905 940 16 0.0015863 781 16 0.078861 578 16 0.0341550 740 16 0.0010486 643 16 0.0020408 260 6 0.00097273 806 16 0.059208 659 16 0.021472 604 15 0.0590498 581 12 0.058824 393 12 0.247049 655 17 0.089380 173 13 0.095994 336 10 0.065852 475 15 0.0311220 273 14 0.057099 243 8 0.0139855 765 16 0.047274 381 17 0.0733109 326 16 0.070829 423 12 0.0622770 676 16 0.001858 748 16 0.1404613 795 16 0.0421583 598 16 0.045623 345 12 0.02748285 379 12 0.1709957 150 12 0.055492 261 17 0.2159252 569 16 0.0186649 870 17 0.0069627 678 24 0.0526316 394 12 0.101597 526 12 0.0630620 426 12 0.010865 0.0107340 0.0041454 0.0132424 0.0095832 0.014693 0.0102504 0.0013557 0.004583 0.0030711 0.008309 0.0081922 0.0030090 0.0071325 0.0034933 0.0052278 0.0063704 0.0262510 0.00048614 0.0208025 0.035457 0.0152705 0.021911 0.0058030 0.0077228 0.0112136 0.018779 0.0209480 0.025914 0.0139397 0.0032483 0.0219375 0.0567945 0.0837494 0.0829286 0.0207053 0.037892 0.2221547 0.0036009 0.0207835 0.0000000 0.0037175 0.0318632 10 0.0107222 0.0169220 -5.3326e-03 16 0.100634 0.081573 0.01906101 9.9484e-01 1.9560e-01 insignificant 1.000000 1.0000e+00 insignificant 0.9025844 0.77876501 insignificant 1 1.00000 insignificant -0.01549537 0.3561070 insignificant 1 insignificant 0.0106010 0.0821025 -0.0678943 16 0.108328 0.105939 0.0023889 9.9999e-01 3.1579e-11 weaklyHypometh 1.0000e+00 6.3158e-09 weaklyHypometh 9.9855e-01 1.0289e-04 weaklyHypometh 1.0000e+00 2.5722e-02 weaklyHypometh -0.0459882 2.3111e-01 insignificant 1.0000e+00 insignificant 0.0105304 0.0107118 -0.00056738 12 0.110703 0.059013 0.05169046 6.4430e-01 9.6506e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.9356e-01 9.9232e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0016256 9.3989e-01 insignificant 1.000000 insignificant 0.0168067 0.0821025 -0.06259607 16 0.065104 0.1059390 -0.0408355 9.9996e-01 5.0952e-04 weaklyHypometh 1.0000e+00 4.7720e-02 weaklyHypometh 9.9998e-01 4.8352e-03 weaklyHypometh 1.0000e+00 0.53724508 insignificant -0.0304929 4.0707e-01 insignificant 1.0000e+00 insignificant 0.0168549 0.0107118 4.6146e-03 12 0.092753 0.0590127 0.03374053 9.1734e-01 9.9966e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.9569e-01 9.9969e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0138698 0.50879333 insignificant 1.000000 insignificant 0.0812227 0.0113180 0.07061249 12 0.092533 0.067755 0.0247778 4.0601e-02 1.0000e+00 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 1.1777e-01 1.0000e+00 insignificant 1.00000000 1.0000e+00 insignificant 0.0443626 2.6304e-01 insignificant 1.0000e+00 insignificant chr7 98301335 98302335 27635 ENSG00000207204 0.522810 227 4 0.5738435 78 6 0.5458120 61 6 0.437907 109 4 0.585805 101 6 0.538070 392 8 0.603156 63 3 0.654600 78 8 0.594580 85 5 0.5822733 103 6 0.690560 249 9 0.6785428 75 5 0.6375606 120 5 0.5000000 2 0 0.59810108 86 6 0.577160 66 5 0.562073 61 4 0.3681142 118 4 0.612428 109 6 0.515961 296 8 0.727778 73 6 0.573953 70 5 0.549926 101 6 0.7678571 47 5 0.580556 47 4 0.6838229 109 8 0.564606 64 6 0.5076531 26 2 0.527778 55 5 0.7012654 102 6 0.625902 88 8 0.5228136 389 8 0.5906011 116 8 0.585338 108 6 0.61799242 93 8 0.5512626 36 3 0.454101 55 4 0.4395386 118 6 0.4563540 224 4 0.5283374 150 4 0.3622126 150 4 0.535655 187 4 0.5401348 152 4 0.494006 0.6533928 0.5405590 0.4824143 0.6292515 0.519719 0.5424626 0.6575190 0.548661 0.6279670 0.654150 0.5225310 0.6676414 NA 0.6175294 0.6105999 0.6167007 0.5275707 0.60374215 0.5165418 0.707226 0.5514134 0.479751 0.7375767 0.5848671 0.5811006 0.676762 0.5840272 0.652693 0.5729769 0.6448335 0.5598336 0.6126537 0.4506712 0.5664157 0.5455521 0.497590 0.4837214 0.5173659 0.4393207 0.4889759 0.4696156 0.4756180 3 0.5675676 0.6011956 -1.3583e-02 6 0.557170 0.601791 -0.04462106 9.7376e-01 4.5942e-01 insignificant 1.000000 1.0000e+00 insignificant 0.9078301 0.44317745 insignificant 1 1.00000 insignificant -0.04219131 0.1843067 insignificant 1 insignificant 0.5655004 0.5400763 0.0319590 6 0.542894 0.476527 0.0663666 7.6386e-03 8.9029e-01 weaklyHypermeth 6.7005e-02 1.0000e+00 weaklyHypermeth 6.2300e-02 9.8040e-01 insignificant 5.4649e-01 1.0000e+00 insignificant 0.0291622 4.3040e-01 insignificant 1.0000e+00 insignificant 0.5658377 0.4820394 0.07870506 4 0.560755 0.558243 0.00251241 3.2789e-02 1.1912e-01 lowCoverage 7.8070e-01 1.0000e+00 lowCoverage 1.0193e-02 1.8017e-01 lowCoverage 4.8537e-01 1.0000e+00 lowCoverage 0.0844291 6.8122e-02 lowCoverage 1.000000 lowCoverage 0.5986219 0.5400763 0.04732100 6 0.580166 0.4765271 0.1036391 1.1182e-02 9.5454e-01 weaklyHypermeth 9.8953e-02 1.0000e+00 weaklyHypermeth 2.4996e-02 9.6479e-01 weaklyHypermeth 2.5507e-01 1.00000000 insignificant 0.0713535 9.9485e-02 insignificant 9.1270e-01 insignificant 0.5982684 0.4820394 1.0353e-01 4 0.569354 0.5582430 0.01111067 2.3829e-02 1.0224e-02 lowCoverage 7.2208e-01 3.7866e-01 lowCoverage 1.3615e-02 2.5312e-01 lowCoverage 6.7837e-01 1.000000 lowCoverage 0.1266204 0.01629037 lowCoverage 0.561737 lowCoverage 0.5411090 0.4820394 0.04453279 4 0.536093 0.558243 -0.0221500 1.7171e-01 1.7230e-02 lowCoverage 1.0000e+00 1.5523e-01 lowCoverage 1.8991e-01 7.0042e-02 lowCoverage 1.00000000 5.9865e-01 lowCoverage 0.0552668 2.6127e-01 lowCoverage 1.0000e+00 lowCoverage chr7 98327235 98328235 27636 ENSG00000208889 0.778571 68 5 0.7600000 26 5 0.7100000 24 4 0.653333 29 5 0.710714 45 5 0.653333 49 4 0.541667 27 1 0.605000 69 5 0.408333 32 5 0.8200000 26 1 0.709069 74 5 0.7200000 14 1 0.7688889 57 5 0.7333333 35 5 0.58666667 32 5 0.777778 9 1 0.950000 24 1 0.5685714 35 5 0.711111 39 4 0.715238 31 5 1.000000 9 0 0.750000 4 0 0.725000 32 1 0.6857143 32 5 0.950000 15 0 0.7338095 85 4 0.683333 17 1 0.5000000 8 0 0.577922 27 1 0.7010989 55 4 0.747253 57 4 0.7083333 32 5 0.6818182 49 5 0.595556 46 5 0.61086048 80 5 0.0000000 1 0 0.503333 27 4 0.7484694 39 5 0.6916667 41 5 0.7833333 47 5 0.7555556 41 5 0.600000 10 1 0.7222222 42 5 0.773810 0.6666667 0.7166667 0.6444444 0.7113095 0.600000 0.5000000 0.5319444 0.402778 0.7833333 0.707557 0.7000000 0.7518519 0.7222222 0.5888889 NA 0.9166667 0.5571429 0.64814815 0.6960317 1.000000 0.7185491 0.666667 0.5500000 0.9583333 0.7365079 0.680556 0.4166667 0.598485 0.6675824 0.7060440 0.7361111 0.6515152 0.5296296 0.5804790 NA 0.461111 0.6065476 0.6319444 0.7638889 0.7407407 NA 0.7351852 0 0.6939597 0.7211796 -1.5550e-02 5 0.686726 0.694549 -0.00782227 9.8191e-01 7.4107e-01 insignificant 1.000000 1.0000e+00 insignificant 0.9780771 0.65223872 insignificant 1 1.00000 insignificant -0.03612493 0.4506897 lowCoverage 1 lowCoverage 0.6935484 0.6322314 0.0823705 5 0.641973 0.720900 -0.0789270 1.6985e-02 9.9907e-01 weaklyHypermeth 1.4037e-01 1.0000e+00 insignificant 6.3299e-02 9.9748e-01 insignificant 5.5043e-01 1.0000e+00 insignificant 0.1707409 1.8530e-01 lowCoverage 1.0000e+00 lowCoverage 0.6940701 0.7237569 -0.03034497 5 0.698762 0.732753 -0.03399071 9.0779e-01 3.0665e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.0544e-01 3.0368e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0164751 6.9491e-01 lowCoverage 1.000000 lowCoverage 0.7189189 0.6322314 0.09360510 5 0.650913 0.7208999 -0.0699873 2.0891e-02 9.9974e-01 weaklyHypermeth 1.6848e-01 1.0000e+00 insignificant 1.7159e-02 9.9736e-01 weaklyHypermeth 1.8856e-01 1.00000000 insignificant 0.2068659 1.2448e-01 lowCoverage 1.0000e+00 lowCoverage 0.7193460 0.7237569 -2.0625e-02 5 0.711278 0.7327527 -0.02147508 7.7156e-01 4.5792e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.6438e-01 5.9352e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0196498 0.70274530 lowCoverage 1.000000 lowCoverage 0.6291667 0.7237569 -0.11938110 5 0.609260 0.732753 -0.1234929 9.9921e-01 3.8911e-03 weaklyHypometh 1.0000e+00 4.1395e-02 weaklyHypometh 9.9972e-01 6.7601e-03 weaklyHypometh 1.00000000 9.8956e-02 weaklyHypometh -0.1872161 1.5461e-01 lowCoverage 1.0000e+00 lowCoverage chr7 99045935 99046935 27657 ZNF655 ENSG00000197343 0.605627 194 5 0.6626694 126 5 0.7147334 80 5 0.733414 151 5 0.418913 73 5 0.768916 234 5 0.581953 96 5 0.803776 98 5 0.678188 91 5 0.7701922 102 5 0.819523 209 5 0.4761905 41 3 0.8041897 105 5 0.8666667 62 5 0.79260940 99 5 0.885897 49 5 0.379487 29 2 0.5293286 126 5 0.562231 122 5 0.662395 209 5 0.626111 38 4 0.743333 66 5 0.727564 101 5 0.7260343 79 5 0.779048 25 4 0.7090353 233 5 0.755000 51 5 0.6686752 76 5 0.733333 81 5 0.8080803 156 5 0.796605 178 5 0.7946301 289 5 0.7794252 116 5 0.588005 75 4 0.75310961 102 5 0.7424242 27 2 0.450180 85 5 0.6764284 159 5 0.7969454 139 5 0.7098246 116 5 0.7810559 135 5 0.726258 85 5 0.7666408 145 5 0.691450 0.6734949 0.5760469 0.6984665 0.5709872 0.725000 0.6048389 0.6832625 0.672439 0.7717776 0.762646 0.5210955 0.7840116 0.9012090 0.7777490 0.8978012 0.2991896 0.6972910 0.63740578 0.7256371 0.595668 0.7394646 0.691428 0.7515049 0.7885023 0.7890113 0.803121 0.6595844 0.726770 0.7298543 0.6998696 0.8169475 0.7215370 0.6207293 0.7297476 0.6862145 0.490764 0.6619471 0.7723749 0.6877102 0.7091526 0.6100187 0.6751493 2 0.7099303 0.7552804 -4.7010e-02 5 0.671553 0.777486 -0.10593256 9.9282e-01 4.1235e-02 weaklyHypometh 1.000000 1.0000e+00 insignificant 0.9642761 0.15528932 insignificant 1 1.00000 insignificant -0.06310903 0.0949756 lowCoverage 1 lowCoverage 0.7100437 0.6631206 0.0443691 5 0.672368 0.643997 0.0283705 1.9394e-02 9.0639e-01 weaklyHypermeth 1.5515e-01 1.0000e+00 insignificant 2.6154e-01 9.1235e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0109163 8.6170e-01 lowCoverage 1.0000e+00 lowCoverage 0.7100437 0.6935484 0.00658323 5 0.672368 0.772108 -0.09974018 7.3676e-01 1.2085e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.6941e-01 6.0152e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0802999 3.9781e-02 lowCoverage 0.714725 lowCoverage 0.7545654 0.6631206 0.09006609 5 0.740400 0.6439972 0.0964029 2.3164e-04 9.9520e-01 weaklyHypermeth 3.1731e-03 1.0000e+00 weaklyHypermeth 8.2163e-03 9.7512e-01 weaklyHypermeth 1.0671e-01 1.00000000 insignificant 0.0740253 2.1730e-01 lowCoverage 1.0000e+00 lowCoverage 0.7545654 0.6935484 5.2334e-02 5 0.740400 0.7721078 -0.03170774 3.4663e-02 3.0301e-01 weaklyHypermeth 9.1217e-01 1.0000e+00 insignificant 1.7182e-01 1.7775e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0171908 0.46408730 lowCoverage 1.000000 lowCoverage 0.6631206 0.6935484 -0.04096961 5 0.643997 0.772108 -0.1281106 9.0409e-01 8.5249e-03 weaklyHypometh 1.0000e+00 8.2766e-02 weaklyHypometh 9.1184e-01 9.3933e-02 insignificant 1.00000000 7.2816e-01 insignificant -0.0912162 1.4159e-01 lowCoverage 1.0000e+00 lowCoverage chr7 99586235 99587235 27672 C7orf59 ENSG00000188186 0.794203 364 10 0.7615460 422 10 0.7198167 242 10 0.900483 245 10 0.762059 157 10 0.777820 535 11 0.874022 179 9 0.832910 241 9 0.793796 200 9 0.8258957 204 10 0.821200 453 10 0.8119452 125 8 0.8250581 239 10 0.9069292 88 6 0.84162985 238 9 0.738598 115 8 0.810169 3621 7 0.8149169 253 10 0.847749 187 10 0.827735 515 11 0.795960 109 7 0.888692 160 9 0.807212 223 10 0.7329131 159 8 0.834283 115 7 0.8645025 348 10 0.802727 214 7 0.8349862 100 5 0.807052 229 10 0.8259494 334 10 0.823666 289 10 0.8234591 519 10 0.7632512 327 9 0.688758 185 10 0.77383200 252 10 0.8931818 67 8 0.660045 217 9 0.7241705 336 10 0.8642040 330 10 0.8538237 369 10 0.9004582 280 10 0.837122 323 10 0.8680035 347 10 0.870580 0.8352756 0.7830969 0.9018103 0.8066691 0.879917 0.8567103 0.8468061 0.807668 0.8590254 0.858038 0.8210628 0.8710039 0.9051081 0.8772512 0.8303647 0.8336759 0.8539936 0.87232579 0.8763599 0.919109 0.8629609 0.803358 0.8219589 0.8088982 0.8909297 0.812292 0.7963826 0.796867 0.8960962 0.8632850 0.8940878 0.7919766 0.7008221 0.8069463 0.8494876 0.778782 0.8031639 0.8897267 0.8887586 0.9383818 0.8828310 0.8944475 7 0.8557347 0.8352983 -9.7686e-03 10 0.800793 0.792342 0.00845158 7.6694e-01 1.2452e-02 weaklyHypometh 1.000000 1.0000e+00 insignificant 0.4400239 0.03988042 weaklyHypometh 1 1.00000 insignificant -0.00569278 0.7151973 insignificant 1 insignificant 0.8557347 0.7651734 0.0617662 10 0.800793 0.733813 0.0669800 1.1393e-05 1.3087e-01 weaklyHypermeth 1.6754e-04 1.0000e+00 weaklyHypermeth 5.7296e-04 9.5496e-01 weaklyHypermeth 1.0418e-02 1.0000e+00 weaklyHypermeth 0.0638842 1.1923e-01 insignificant 1.0000e+00 insignificant 0.8559805 0.8629472 -0.05541790 10 0.805411 0.869479 -0.06406827 9.9999e-01 1.2307e-07 weaklyHypometh 1.0000e+00 4.8823e-05 weaklyHypometh 9.9989e-01 3.6877e-03 weaklyHypometh 1.0000e+00 2.8196e-01 insignificant -0.0502983 4.8273e-03 weaklyHypometh 0.211830 insignificant 0.8352983 0.7651734 0.07250654 10 0.792342 0.7338135 0.0585284 1.3625e-06 9.6430e-01 weaklyHypermeth 2.6716e-05 1.0000e+00 weaklyHypermeth 5.0854e-04 9.8605e-01 weaklyHypermeth 1.0171e-02 1.00000000 weaklyHypermeth 0.0695770 9.5419e-02 insignificant 9.0133e-01 insignificant 0.8359011 0.8629472 -4.3546e-02 10 0.807555 0.8694793 -0.06192453 9.9192e-01 1.8408e-02 weaklyHypometh 1.0000e+00 5.6538e-01 insignificant 8.8767e-01 1.2585e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0446055 0.01196248 weaklyHypometh 0.466003 insignificant 0.7653874 0.8629472 -0.11704307 10 0.739918 0.869479 -0.1295616 9.9977e-01 3.4667e-08 weaklyHypometh 1.0000e+00 1.3333e-06 weaklyHypometh 9.9678e-01 4.5232e-06 weaklyHypometh 1.00000000 2.0560e-04 weaklyHypometh -0.1141825 1.7689e-02 weaklyHypometh 2.3904e-01 insignificant chr7 99679335 99680335 27676 ENSG00000222482 0.831412 100 5 0.8672951 74 5 0.7142857 37 5 0.845614 93 5 0.966667 33 5 0.781318 167 5 0.700000 37 5 0.722381 90 5 0.686667 31 4 0.7606061 39 5 0.842925 175 5 0.7500000 29 3 0.7477273 51 5 0.8888889 36 5 0.77333333 54 5 0.700000 14 0 0.750000 5 0 0.7889258 103 5 0.842633 74 5 0.636168 87 5 0.900000 14 0 0.900833 49 5 0.747350 55 5 0.9296296 36 5 0.755556 37 5 0.7674242 80 5 0.843901 73 5 0.6500000 22 2 0.917143 55 5 0.8200000 88 5 0.816774 88 5 0.8776945 137 5 0.6190909 80 5 0.805495 66 5 0.83723197 92 5 0.8000000 11 0 0.615303 41 5 0.7640696 99 5 0.7317513 67 5 0.7865256 94 5 0.7617803 112 5 0.916667 51 5 0.9005694 103 5 0.838982 0.8871195 0.7055288 0.8548133 0.9663462 0.780757 0.6893887 0.7317308 0.702083 0.7583042 0.817467 0.7431319 0.7496722 0.8878205 0.7815705 0.7211538 0.7625116 0.7944310 0.85834727 0.7735859 0.899038 0.9084936 0.750904 0.9243590 0.7371795 0.7842366 0.817476 0.7706731 0.916804 0.8158654 0.7926088 0.8544266 0.7561189 0.8080621 0.8038686 0.7980769 0.619362 0.7722000 0.7341468 0.8046936 0.7743003 0.9158654 0.9100648 1 0.7975922 0.8269755 -2.1708e-02 5 0.772694 0.832253 -0.05955948 8.8559e-01 1.2951e-01 insignificant 1.000000 1.0000e+00 insignificant 0.8335342 0.07590190 insignificant 1 1.00000 insignificant -0.04734977 0.1323206 lowCoverage 1 lowCoverage 0.7975922 0.7660668 0.0316217 5 0.772694 0.694031 0.0786630 1.6147e-01 9.5903e-01 insignificant 9.7271e-01 1.0000e+00 insignificant 3.0548e-01 9.6737e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0396440 3.9570e-01 lowCoverage 1.0000e+00 lowCoverage 0.7978884 0.8196721 -0.02762192 5 0.793899 0.821165 -0.02726627 8.9231e-01 2.0004e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.5713e-01 3.0108e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0396163 3.7760e-01 lowCoverage 1.000000 lowCoverage 0.8269755 0.7660668 0.05846654 5 0.832253 0.6940308 0.1382225 2.2759e-02 9.9893e-01 weaklyHypermeth 1.8063e-01 1.0000e+00 insignificant 1.5551e-02 9.9796e-01 weaklyHypermeth 1.7672e-01 1.00000000 insignificant 0.0869937 9.7141e-02 lowCoverage 9.0133e-01 lowCoverage 0.8264463 0.8196721 -6.7142e-03 5 0.823704 0.8211655 0.00253844 6.0478e-01 3.0973e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.7403e-01 3.6342e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0077334 0.86732872 lowCoverage 1.000000 lowCoverage 0.7694301 0.8196721 -0.05790638 5 0.766170 0.821165 -0.0549952 9.6199e-01 4.5207e-02 weaklyHypometh 1.0000e+00 3.4875e-01 insignificant 9.9324e-01 8.6700e-02 insignificant 1.00000000 6.8267e-01 insignificant -0.0792603 1.8249e-01 lowCoverage 1.0000e+00 lowCoverage chr7 99682135 99683135 27678 ENSG00000222482 0.589528 132 6 0.6308298 199 6 0.4904624 83 4 0.542510 124 6 0.547936 75 5 0.540659 229 5 0.559748 96 6 0.552175 156 6 0.517096 92 4 0.2996633 66 3 0.640190 232 7 0.3352273 33 2 0.5879365 97 6 0.5772947 56 4 0.50768407 117 5 0.534694 54 5 0.684211 22 1 0.3945094 107 5 0.475763 113 5 0.530799 162 6 0.559375 55 3 0.107143 37 2 0.520128 107 5 0.5326267 66 5 0.607897 76 4 0.6457920 199 5 0.514161 96 4 0.5309524 47 2 0.421503 126 6 0.5241097 240 6 0.372689 199 5 0.5334470 150 6 0.5064802 167 6 0.489621 83 6 0.46316974 285 6 0.4250000 33 2 0.552474 119 6 0.4601059 170 6 0.5611389 130 6 0.4992424 116 6 0.5776942 113 6 0.453613 99 5 0.5643300 136 6 0.444261 0.2031875 0.2609035 0.2683518 0.3104873 0.267918 0.2881766 0.3544112 0.210020 0.3023946 0.483157 0.1560712 0.2472416 0.4215229 0.2436181 0.2222777 0.3014468 0.2881630 0.28879291 0.2414460 0.489545 0.2602903 0.373023 0.3935343 0.3005356 0.2434818 0.227716 0.2753260 0.345877 0.2152460 0.2694821 0.4131246 0.3181521 0.3859474 0.3332951 0.1816687 0.280528 0.3232851 0.2492754 0.2398284 0.2691349 0.1935588 0.3414525 2 0.3950893 0.3383405 1.1935e-02 5 0.549414 0.401024 0.14838980 4.9399e-01 9.4892e-01 insignificant 1.000000 1.0000e+00 insignificant 0.7749297 0.84727559 insignificant 1 1.00000 insignificant 0.03779386 0.4195591 lowCoverage 1 lowCoverage 0.3949955 0.3547258 -0.0224463 6 0.587689 0.503826 0.0838630 1.3705e-01 1.8196e-02 weaklyHypometh 8.4082e-01 8.6650e-01 insignificant 8.7640e-02 4.5974e-01 insignificant 6.9556e-01 1.0000e+00 insignificant 0.0441372 1.2936e-01 lowCoverage 1.0000e+00 lowCoverage 0.3898917 0.5202020 -0.00134238 6 0.463777 0.625874 -0.16209762 7.1592e-01 5.0478e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.2321e-01 6.5853e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0042579 8.9580e-01 lowCoverage 1.000000 lowCoverage 0.3385940 0.3551402 -0.04891134 5 0.453104 0.5598065 -0.1067027 3.6677e-01 1.4291e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.5013e-01 5.0693e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0063433 8.8804e-01 lowCoverage 1.0000e+00 lowCoverage 0.3347763 0.5202020 -1.1453e-02 5 0.399232 0.6258743 -0.22664255 8.7085e-01 3.6621e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.1077e-01 3.9294e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0420518 0.38376884 lowCoverage 1.000000 lowCoverage 0.3521127 0.5185811 -0.01107045 6 0.434037 0.518981 -0.0849443 3.9537e-01 2.3851e-02 weaklyHypometh 1.0000e+00 1.9712e-01 insignificant 4.5251e-01 3.3677e-02 weaklyHypometh 1.00000000 3.4365e-01 insignificant -0.0483951 1.4277e-01 insignificant 1.0000e+00 insignificant chr7 99705135 99706135 27679 ENSG00000222482 0.562500 65 4 0.3843823 98 6 0.4008326 75 5 0.480843 53 5 0.320833 33 4 0.476196 125 5 0.505556 44 6 0.302741 98 5 0.457362 75 5 0.5178571 61 5 0.586070 148 6 0.3643590 40 4 0.2914427 99 4 0.0000000 5 1 0.44545455 58 5 0.260714 21 2 0.321970 44 4 0.6510823 43 4 0.604167 50 4 0.690099 148 4 0.566972 54 6 0.273016 53 5 0.459712 83 4 0.1982143 56 6 0.544746 76 6 0.3550420 103 6 0.476768 81 6 0.3472222 13 0 0.358880 61 4 0.3637566 136 6 0.478735 113 6 0.6229759 125 5 0.6262329 78 6 0.664947 68 5 0.73214286 192 6 0.4517544 34 2 0.700000 44 6 0.6557179 104 6 0.1491582 60 5 0.2825111 107 5 0.3533333 54 5 0.382283 62 4 0.4129630 45 5 0.692402 0.5538246 0.5259310 0.7096574 0.6222222 0.587472 0.6450980 0.4393342 0.593120 0.6516106 0.760731 0.3944822 0.4218269 NA 0.5481283 0.4117647 0.3158051 0.5436296 0.59722222 0.6843784 0.805958 0.3084928 0.686396 0.2461485 0.7916667 0.5108492 0.717172 0.2009804 0.443623 0.5438842 0.5741523 0.6947735 0.8552060 0.9670868 1.0000000 0.5784314 1.000000 0.8520690 0.2154486 0.4084591 0.4225490 0.3643351 0.6071895 2 0.5162925 0.4748428 1.1471e-02 5 0.441854 0.490466 -0.04861158 2.4052e-01 8.2441e-01 insignificant 1.000000 1.0000e+00 insignificant 0.7121160 0.75161987 insignificant 1 1.00000 insignificant 0.01071984 0.8350292 lowCoverage 1 lowCoverage 0.5163162 0.7923077 -0.2890234 5 0.432163 0.668372 -0.2362087 9.9985e-01 2.3532e-15 hypomethylated 1.0000e+00 1.1766e-12 hypomethylated 1.0000e+00 2.0719e-09 hypomethylated 1.0000e+00 2.0719e-06 hypomethylated -0.2072428 1.8254e-03 lowCoverage 4.1366e-02 lowCoverage 0.5163162 0.3628049 0.17913737 5 0.432163 0.273144 0.15901922 6.7521e-07 1.0000e+00 weaklyHypermeth 5.1940e-05 1.0000e+00 weaklyHypermeth 1.8628e-04 9.9999e-01 weaklyHypermeth 1.6934e-02 1.0000e+00 weaklyHypermeth 0.1151734 8.1880e-02 lowCoverage 1.000000 lowCoverage 0.4742917 0.7923077 -0.29251962 5 0.405543 0.6683720 -0.2628285 1.0000e+00 1.6280e-12 hypomethylated 1.0000e+00 8.1401e-10 hypomethylated 1.0000e+00 3.7167e-07 hypomethylated 1.0000e+00 0.00023949 hypomethylated -0.2179626 1.5292e-03 weaklyHypometh 3.6530e-02 weaklyHypometh 0.4742917 0.3628049 1.6603e-01 5 0.405543 0.2731441 0.13239939 4.2709e-04 9.9973e-01 weaklyHypermeth 2.5123e-02 1.0000e+00 weaklyHypermeth 5.0262e-03 9.9989e-01 weaklyHypermeth 4.2224e-01 1.000000 insignificant 0.1044535 0.11224206 lowCoverage 1.000000 lowCoverage 0.7923077 0.3628049 0.48391091 5 0.668372 0.273144 0.3952279 3.0546e-17 1.0000e+00 hypermethylated 3.0546e-14 1.0000e+00 hypermethylated 2.6703e-07 1.0000e+00 hypermethylated 0.00026703 1.0000e+00 hypermethylated 0.3224161 6.9221e-04 lowCoverage 3.1064e-02 lowCoverage chr7 99944635 99945635 27688 C7orf51 ENSG00000166924 0.851727 294 9 0.7685703 248 9 0.7094605 157 9 0.854534 278 9 0.810648 82 6 0.874025 525 9 0.794563 128 6 0.861587 205 9 0.797545 145 9 0.8566578 145 9 0.835891 276 9 0.9203704 49 4 0.8119807 299 9 0.8083333 86 4 0.81064238 194 9 0.919172 71 6 0.611562 52 2 0.5952993 317 9 0.829842 264 9 0.837760 393 9 0.915675 44 4 0.856217 137 8 0.809412 168 9 0.8616917 121 8 0.773148 96 8 0.8466923 349 9 0.698674 138 8 0.9002757 66 4 0.880601 226 9 0.8659320 407 9 0.853319 329 9 0.8693359 521 9 0.1838309 325 9 0.289366 178 9 0.36770833 139 4 0.2351852 65 7 0.369007 161 8 0.1979626 424 9 0.7065047 171 8 0.8493482 271 9 0.8284551 160 9 0.806405 280 9 0.5359957 203 9 0.814596 0.7112240 0.6538486 0.7890382 0.7890439 0.829792 0.7232155 0.8131222 0.738105 0.8022587 0.800844 0.9185268 0.7865825 0.8031584 0.7855842 0.8895746 0.7483848 0.5256681 0.75877595 0.8017759 0.868342 0.8219410 0.759532 0.7520801 0.8020213 0.8139299 0.760912 0.9022606 0.840660 0.8328768 0.7987025 0.8401699 0.1788288 0.2382337 0.1888972 0.1924851 0.364142 0.1788763 0.6704080 0.8211534 0.7673346 0.7647501 0.5534508 4 0.7984791 0.8397387 -4.5506e-02 9 0.830112 0.812134 0.01797829 9.7841e-01 1.4486e-02 weaklyHypometh 1.000000 1.0000e+00 insignificant 0.9570177 0.05312201 insignificant 1 1.00000 insignificant -0.03623917 0.1662309 insignificant 1 insignificant 0.7984312 0.1803406 0.6102981 9 0.811236 0.224781 0.5864545 2.1954e-70 1.0000e+00 hypermethylated 7.3178e-68 1.0000e+00 hypermethylated 2.9942e-18 1.0000e+00 hypermethylated 7.4855e-16 1.0000e+00 hypermethylated 0.5341653 3.8359e-07 hypermethylated 2.7399e-05 hypermethylated 0.7984312 0.7520737 0.05342230 9 0.811236 0.754021 0.05721501 1.0027e-02 9.7145e-01 weaklyHypermeth 3.2344e-01 1.0000e+00 insignificant 1.7701e-02 9.9019e-01 weaklyHypermeth 7.6962e-01 1.0000e+00 insignificant 0.0626669 3.5098e-01 insignificant 1.000000 insignificant 0.8400000 0.1803406 0.65305139 9 0.846816 0.2247814 0.6220342 6.6813e-65 1.0000e+00 hypermethylated 3.3406e-62 1.0000e+00 hypermethylated 2.9132e-15 1.0000e+00 hypermethylated 7.2830e-13 1.00000000 hypermethylated 0.5704045 4.9259e-07 hypermethylated 6.1574e-05 hypermethylated 0.8400000 0.7520737 1.0452e-01 9 0.846816 0.7540209 0.09279469 2.3267e-06 9.8433e-01 weaklyHypermeth 2.1152e-04 1.0000e+00 weaklyHypermeth 1.8962e-04 9.9424e-01 weaklyHypermeth 3.5787e-02 1.000000 weaklyHypermeth 0.0989061 0.16516669 insignificant 1.000000 insignificant 0.1803406 0.7520737 -0.56941492 9 0.224781 0.754021 -0.5292395 1.0000e+00 3.2162e-26 hypomethylated 1.0000e+00 3.5736e-24 hypomethylated 1.0000e+00 1.6082e-10 hypomethylated 1.00000000 3.2747e-08 hypomethylated -0.4714984 2.7449e-04 hypomethylated 2.1114e-02 hypomethylated chr7 99968535 99969535 27691 ENSG00000223199 0.623768 169 11 0.5444382 126 6 0.6607143 45 6 0.681267 166 11 0.638435 41 6 0.638945 170 11 0.567995 78 6 0.613249 99 6 0.685065 57 6 0.4800000 23 1 0.682228 170 6 0.8611111 20 0 0.5712963 49 6 0.5555556 42 6 0.72857143 51 6 0.500000 14 2 0.586107 277 5 0.7298328 170 8 0.746528 80 6 0.633261 129 9 0.840000 12 1 0.791667 13 0 0.679108 92 8 0.5668934 47 6 0.818182 52 2 0.5165414 100 6 0.750000 21 3 0.5092593 20 1 0.552495 92 6 0.7172833 106 6 0.615214 110 6 0.5957089 126 9 0.5528822 80 6 0.660714 52 5 0.54384762 119 6 0.4833333 10 1 0.489182 88 6 0.6835570 156 6 0.6633248 171 11 0.6251628 198 11 0.6525899 175 11 0.627891 110 8 0.7030985 174 9 0.691613 0.5256227 0.6770624 0.7048960 0.6192991 0.655211 0.5585834 0.7242434 0.676536 0.6653125 0.700321 0.7887324 0.6081768 0.6602113 0.7732227 0.4883097 NA 0.7433649 0.76936620 0.7209926 0.801605 0.6001495 0.611655 0.6738207 0.7396500 0.6286879 0.636150 0.6244131 0.659998 0.7175085 0.6075793 0.7785826 0.5141269 0.6431925 0.5322052 0.6063955 0.530740 0.6373762 0.7177713 0.7902114 0.6761587 0.6318370 0.6871704 0 0.6457490 0.6675095 -5.6074e-03 6 0.645129 0.575092 0.07003738 7.7322e-01 1.0583e-01 insignificant 1.000000 1.0000e+00 insignificant 0.6706752 0.21583484 insignificant 1 1.00000 insignificant -0.02627759 0.5187004 lowCoverage 1 lowCoverage 0.6691325 0.5762376 0.0973297 6 0.612178 0.574921 0.0372564 4.4121e-04 9.7742e-01 weaklyHypermeth 5.1906e-03 1.0000e+00 weaklyHypermeth 8.1822e-03 9.6238e-01 weaklyHypermeth 1.0838e-01 1.0000e+00 insignificant 0.0674990 1.2862e-01 insignificant 1.0000e+00 insignificant 0.6455696 0.7077295 -0.02185677 9 0.615557 0.641279 -0.02572202 8.7717e-01 1.3527e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.3277e-01 4.3014e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0179950 4.7626e-01 insignificant 1.000000 insignificant 0.6685160 0.5762376 0.09548986 6 0.560561 0.5749212 -0.0143601 1.4629e-05 8.5198e-01 weaklyHypermeth 2.3983e-04 1.0000e+00 weaklyHypermeth 3.4110e-04 8.8856e-01 weaklyHypermeth 7.1062e-03 1.00000000 weaklyHypermeth 0.0937766 7.6077e-02 lowCoverage 7.6077e-01 lowCoverage 0.6683544 0.7077295 -1.8901e-02 6 0.623016 0.6412787 -0.01826252 6.7423e-01 4.8558e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.2653e-01 6.6602e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0082826 0.82698736 lowCoverage 1.000000 lowCoverage 0.5762376 0.7435065 -0.12097554 6 0.574921 0.635774 -0.0608524 9.8344e-01 3.9778e-05 weaklyHypometh 1.0000e+00 7.9556e-04 weaklyHypometh 9.4012e-01 4.1881e-03 weaklyHypometh 1.00000000 7.3420e-02 weaklyHypometh -0.0854940 5.8950e-02 insignificant 5.7794e-01 insignificant chr7 100006035 100007035 27698 ENSG00000184414 0.352126 211 6 0.2206794 156 8 0.3157468 156 8 0.440346 190 6 0.325421 81 8 0.321411 414 8 0.334521 169 8 0.374419 143 8 0.377572 199 8 0.3401649 225 8 0.408557 211 8 0.3558824 114 8 0.5567661 153 6 0.0954301 80 4 0.39421787 170 6 0.358254 93 6 0.285573 95 6 0.4941741 235 6 0.386971 128 6 0.336150 299 8 0.344444 78 9 0.336544 127 6 0.331142 142 6 0.3416667 94 10 0.577201 76 6 0.3336297 204 8 0.363667 101 6 0.3478788 91 7 0.313102 133 6 0.3414383 223 8 0.458730 200 8 0.3230419 373 8 0.3688191 163 6 0.514038 120 6 0.60348276 75 5 0.5312812 57 6 0.326680 147 9 0.3523500 180 6 0.3738742 190 6 0.3116453 239 6 0.3716122 227 8 0.524743 250 6 0.3996058 197 6 0.439694 0.3665270 0.3474942 0.4636266 0.3864300 0.381155 0.3840535 0.3958401 0.390040 0.4179866 0.416581 0.3706373 0.4359702 0.3668003 0.3943147 0.4687985 0.3356596 0.4103565 0.37988961 0.4245139 0.377210 0.3969115 0.363971 0.4114703 0.4525389 0.4081895 0.453783 0.4428556 0.323526 0.4187344 0.3900968 0.4211744 0.3599492 0.4206537 0.6245479 0.4164672 0.444732 0.3874137 0.3539906 0.3770529 0.4052852 0.4184770 0.4257738 6 0.3756388 0.3669924 8.3177e-03 8 0.267566 0.252810 0.01475538 6.5243e-01 9.8728e-01 insignificant 1.000000 1.0000e+00 insignificant 0.7891868 0.92079568 insignificant 1 1.00000 insignificant -0.01398808 0.6483399 insignificant 1 insignificant 0.3756388 0.4595687 -0.0076995 6 0.267566 0.284365 -0.0167994 3.7231e-01 3.0668e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.8672e-01 3.3527e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0957227 1.0328e-01 insignificant 1.0000e+00 insignificant 0.3763595 0.4215775 0.00397900 6 0.342239 0.329526 0.01271289 1.3682e-01 7.8393e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.5735e-02 6.9620e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0425770 3.3298e-01 insignificant 1.000000 insignificant 0.3669924 0.4595687 -0.01943174 6 0.252810 0.2843651 -0.0315547 9.6214e-01 7.8777e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9702e-01 8.5437e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0817346 1.5572e-01 insignificant 1.0000e+00 insignificant 0.3683921 0.4215775 -4.1975e-03 6 0.324128 0.3295263 -0.00539793 5.5637e-01 5.3041e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.0609e-01 6.5817e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0285889 0.51152548 insignificant 1.000000 insignificant 0.4627072 0.4215775 0.00602168 6 0.348016 0.329526 0.0184896 3.2906e-01 2.0647e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.1897e-01 6.3672e-01 insignificant 1.00000000 1.0000e+00 insignificant 0.0531457 3.8819e-01 insignificant 1.0000e+00 insignificant chr7 100238435 100239435 27703 ZAN ENSG00000146839 0.817915 142 7 0.7266440 159 7 0.7135164 128 7 0.863393 131 5 0.773333 41 3 0.801295 142 7 0.859536 84 5 0.751793 91 7 0.710292 85 6 0.8629394 93 4 0.772561 168 7 0.6147324 79 2 0.8099401 121 4 0.4027778 13 1 0.66447368 96 4 0.690476 30 2 0.688393 40 4 0.6280769 149 5 0.717069 119 7 0.724773 145 7 0.576122 56 4 0.566667 16 0 0.859131 95 7 0.6486607 39 4 0.688604 102 5 0.7370645 126 7 0.758503 61 5 0.9714286 24 3 0.860874 101 4 0.7873016 149 7 0.739927 136 7 0.8232983 186 7 0.2550525 200 7 0.403199 119 7 0.50181818 193 5 0.2678571 175 7 0.350148 114 6 0.2403801 220 7 0.7653487 129 5 0.7564220 135 6 0.8245421 120 5 0.634958 119 3 0.7680379 128 7 0.903134 0.7818232 0.7746087 0.8965210 0.8951799 0.821643 0.8648470 0.8682739 0.773724 0.8693598 0.892760 0.7935223 0.8412852 0.8158777 0.8591594 0.8446602 0.7281519 0.8160941 0.80945656 0.9052216 0.791324 0.4991651 0.911939 0.7843273 0.9196233 0.8891621 0.814378 0.9300971 0.845697 0.8673139 0.8165056 0.8918581 0.3493187 0.3942347 0.4320880 0.4546926 0.515783 0.3131773 0.8596091 0.8349703 0.8969380 0.7845574 0.8189234 2 0.8102190 0.8100917 -1.2334e-02 7 0.637120 0.716632 -0.07951251 7.2315e-01 6.3302e-01 insignificant 1.000000 1.0000e+00 insignificant 0.8022110 0.50781493 insignificant 1 1.00000 insignificant -0.02176864 0.6096149 insignificant 1 insignificant 0.8106134 0.2774510 0.4920100 7 0.716760 0.282955 0.4338046 2.4855e-36 1.0000e+00 hypermethylated 2.0713e-34 1.0000e+00 hypermethylated 5.7794e-10 1.0000e+00 hypermethylated 2.8897e-08 1.0000e+00 hypermethylated 0.3932873 2.6040e-05 hypermethylated 1.0850e-03 hypermethylated 0.8127139 0.8114105 0.00356347 5 0.771535 0.763426 0.00810868 6.2881e-02 1.6660e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.6376e-01 1.9956e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0201653 6.1870e-01 insignificant 1.000000 insignificant 0.8099174 0.2774510 0.48207215 7 0.681211 0.2829551 0.3982562 1.9014e-24 1.0000e+00 hypermethylated 9.5068e-23 1.0000e+00 hypermethylated 5.8078e-08 1.0000e+00 hypermethylated 2.6399e-06 1.00000000 hypermethylated 0.4150560 6.9983e-06 hypermethylated 5.8319e-04 hypermethylated 0.8121547 0.8114105 2.5068e-02 5 0.778527 0.7634262 0.01510095 2.7997e-01 1.0388e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.9328e-01 3.0939e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0016033 0.97306007 insignificant 1.000000 insignificant 0.2788177 0.8114105 -0.52097085 5 0.323377 0.763426 -0.4400489 1.0000e+00 4.5445e-17 hypomethylated 1.0000e+00 3.0297e-15 hypomethylated 1.0000e+00 1.4891e-06 hypomethylated 1.00000000 7.0912e-05 hypomethylated -0.4134526 2.8531e-05 hypomethylated 3.5664e-03 hypomethylated chr7 100270935 100271935 27704 EPHB4 ENSG00000196411 0.361708 163 10 0.3445958 216 10 0.3648375 198 9 0.295467 156 7 0.277802 187 10 0.402850 197 8 0.324893 196 9 0.315368 163 10 0.286437 167 7 0.4218207 142 4 0.448650 306 11 0.3054014 188 10 0.2978966 179 10 0.5308642 66 5 0.28611871 196 10 0.231546 175 4 0.205937 118 7 0.2532673 167 5 0.362338 142 8 0.306782 149 9 0.439418 72 6 0.352273 55 1 0.421002 150 8 0.3112073 77 8 0.196503 99 5 0.3264020 243 11 0.351488 104 7 0.4305556 82 5 0.400579 164 10 0.2816538 203 9 0.265000 186 8 0.3050240 209 11 0.3109934 188 11 0.351928 106 8 0.40073662 161 8 0.3157350 36 1 0.417372 103 9 0.4065657 118 8 0.4328980 143 7 0.4793733 165 7 0.3979605 160 5 0.523002 102 5 0.4813866 166 7 0.216488 0.1925260 0.2738154 0.2413528 0.1794647 0.363116 0.2480688 0.1897619 0.232119 0.2867125 0.241349 0.2121151 0.1893744 0.2054169 0.1755823 0.1483397 0.2212531 0.1691123 0.27941176 0.2608543 0.404051 0.2218441 0.297914 0.2825121 0.1589810 0.2098169 0.179653 0.2225490 0.264468 0.1911742 0.1908307 0.2052737 0.1545125 0.1998069 0.1860169 0.2104714 0.292695 0.3441830 0.2881452 0.3361275 0.3191125 0.3198227 0.2718075 1 0.2222864 0.2268856 3.9686e-03 9 0.337021 0.336879 0.00014116 5.5656e-01 7.1981e-01 insignificant 1.000000 1.0000e+00 insignificant 0.4381297 0.84193250 insignificant 1 1.00000 insignificant -0.00886310 0.7497657 insignificant 1 insignificant 0.2222222 0.3623596 -0.0822571 8 0.311096 0.397954 -0.0868584 8.3272e-01 2.6564e-06 weaklyHypometh 1.0000e+00 3.7948e-04 weaklyHypometh 6.7588e-01 1.4748e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0359929 1.8675e-01 insignificant 1.0000e+00 insignificant 0.2218687 0.3804348 -0.05565776 7 0.328698 0.430922 -0.10222459 9.4888e-01 1.7091e-05 weaklyHypometh 1.0000e+00 2.4416e-03 weaklyHypometh 8.9018e-01 3.0355e-02 weaklyHypometh 1.0000e+00 7.9881e-01 insignificant -0.1316951 7.9372e-04 weaklyHypometh 0.072157 weaklyHypometh 0.2268856 0.3628692 -0.09031251 8 0.336879 0.4311172 -0.0942377 6.9037e-01 5.2492e-04 weaklyHypometh 1.0000e+00 4.7720e-02 weaklyHypometh 5.9941e-01 1.9710e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant -0.0271298 3.6224e-01 insignificant 1.0000e+00 insignificant 0.2266910 0.3804348 -6.6685e-02 5 0.337202 0.4309224 -0.09372057 9.6097e-01 3.2972e-04 weaklyHypometh 1.0000e+00 3.2972e-02 weaklyHypometh 9.5796e-01 3.2401e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.1228320 0.00175041 weaklyHypometh 0.218802 insignificant 0.3619718 0.3804348 -0.06366772 5 0.379401 0.430922 -0.0515218 7.6505e-01 1.5130e-02 weaklyHypometh 1.0000e+00 1.3880e-01 insignificant 7.7973e-01 1.2455e-01 insignificant 1.00000000 9.0912e-01 insignificant -0.0957022 9.8773e-03 weaklyHypometh 1.7030e-01 insignificant chr7 100447135 100448135 27706 ENSG00000169887 0.054361 525 14 0.0204891 697 14 0.0669863 597 14 0.077806 570 14 0.029810 578 14 0.085474 885 14 0.101624 698 14 0.070487 617 14 0.038694 964 14 0.0977953 881 14 0.077739 623 14 0.0776692 523 14 0.0203567 662 14 0.1505084 451 13 0.06169904 796 14 0.029068 420 12 0.223057 237 10 0.0331214 676 14 0.029954 606 14 0.037837 625 14 0.022994 185 12 0.024350 455 12 0.038475 486 14 0.0184193 387 14 0.144471 812 13 0.0434114 778 14 0.053154 724 14 0.0075859 398 14 0.059683 648 14 0.0707406 996 14 0.093238 968 14 0.0552956 716 14 0.0017770 624 14 0.016024 444 14 0.00077042 584 9 0.0115619 218 12 0.016520 454 14 0.0671503 744 14 0.1654217 767 14 0.1131423 586 14 0.0687046 405 14 0.047148 467 14 0.0637631 487 14 0.042460 0.0179372 0.0842644 0.0593710 0.0389620 0.096371 0.0554657 0.0682171 0.042669 0.1035070 0.092121 0.0782773 0.0228114 0.1492419 0.0618726 0.0444819 0.1839198 0.0320247 0.04273375 0.0406775 0.030221 0.0256314 0.044887 0.0209790 0.0945633 0.0426574 0.051735 0.0099325 0.066805 0.0697190 0.1065062 0.0596014 0.0017857 0.0106954 0.0063026 0.0199636 0.022737 0.0072645 0.1372319 0.1050596 0.0661203 0.0441533 0.0647457 14 0.0622476 0.0587924 3.8598e-03 14 0.048431 0.094124 -0.04569273 3.3473e-01 9.9214e-01 insignificant 1.000000 1.0000e+00 insignificant 0.1151158 0.99988738 insignificant 1 1.00000 insignificant 0.01657544 0.2922222 insignificant 1 insignificant 0.0623514 0.0081513 0.0505095 14 0.101063 0.034360 0.0667034 2.4024e-11 1.0000e+00 weaklyHypermeth 5.8596e-10 1.0000e+00 weaklyHypermeth 2.2622e-12 1.0000e+00 weaklyHypermeth 1.4139e-10 1.0000e+00 weaklyHypermeth 0.0502596 3.4143e-03 weaklyHypermeth 6.8286e-02 weaklyHypermeth 0.0624107 0.0973451 -0.03261355 14 0.065728 0.104377 -0.03864825 9.0989e-01 9.7846e-07 weaklyHypometh 1.0000e+00 2.4461e-04 weaklyHypometh 6.5096e-01 1.0030e-02 weaklyHypometh 1.0000e+00 5.0148e-01 insignificant -0.0224090 3.8631e-01 insignificant 1.000000 insignificant 0.0587144 0.0078303 0.05048395 14 0.043798 0.0084907 0.0353070 6.2191e-08 1.0000e+00 weaklyHypermeth 1.5169e-06 1.0000e+00 weaklyHypermeth 7.0432e-07 1.0000e+00 weaklyHypermeth 2.9347e-05 1.00000000 weaklyHypermeth 0.0336842 3.8439e-02 weaklyHypermeth 4.8005e-01 insignificant 0.0588235 0.0973451 -3.9607e-02 14 0.056311 0.1043766 -0.04806525 9.8632e-01 8.6883e-08 weaklyHypometh 1.0000e+00 3.4643e-05 weaklyHypometh 9.9307e-01 6.9727e-05 weaklyHypometh 1.0000e+00 0.069727 weaklyHypometh -0.0389845 0.15455810 insignificant 1.000000 insignificant 0.0078585 0.0973451 -0.08156105 14 0.010917 0.104377 -0.0934600 1.0000e+00 1.8403e-17 weaklyHypometh 1.0000e+00 1.4156e-15 weaklyHypometh 1.0000e+00 7.8948e-09 weaklyHypometh 1.00000000 6.5790e-07 weaklyHypometh -0.0726686 2.3289e-02 weaklyHypometh 2.8058e-01 insignificant chr7 100529735 100530735 27708 TRIM56 ENSG00000169871 0.476435 115 5 0.3669780 85 5 0.4406926 108 5 0.467692 80 5 0.511111 42 4 0.472988 85 5 0.428889 89 4 0.402871 68 4 0.475556 65 4 0.4690909 81 4 0.547218 115 5 0.3910526 60 3 0.5179487 101 4 0.7071429 21 2 0.46923077 80 5 0.409722 48 3 0.500000 46 2 0.4400641 94 5 0.517241 114 4 0.371429 96 4 0.416667 35 3 0.333333 9 1 0.502333 94 5 0.3311688 52 3 0.360000 25 2 0.4727273 88 4 0.516667 57 4 0.2500000 38 2 0.415909 72 5 0.4619048 112 5 0.450000 92 5 0.5500000 96 3 0.4940909 61 5 0.460000 47 3 0.85666667 49 3 0.1111111 7 0 0.335000 51 5 0.5111111 86 4 0.5833333 100 5 0.4584848 112 5 0.4666667 59 5 0.488095 89 5 0.4789916 95 5 0.328415 0.2461735 0.2924139 0.3479853 0.3227513 0.316661 0.3066138 0.3377763 0.283598 0.2974026 0.420695 0.3671053 0.3333333 0.3018721 0.2976190 0.3287037 0.3809524 0.3080357 0.35139573 0.2653061 0.357143 0.3388049 0.373798 0.3055040 0.2476190 0.3354978 0.311508 0.3095238 0.303301 0.3435374 0.3392857 0.3630952 0.3063312 0.2833333 0.6205916 0.2755556 0.274405 0.3492063 0.3452381 0.3206710 0.3492063 0.3696145 0.2957183 3 0.3032015 0.2314694 8.7417e-03 4 0.460972 0.457380 0.00359212 3.7082e-01 6.7378e-01 lowCoverage 1.000000 1.0000e+00 lowCoverage 0.1718941 0.48538344 lowCoverage 1 1.00000 lowCoverage 0.04744178 0.1366142 lowCoverage 1 lowCoverage 0.3032015 0.3554817 -0.0021992 4 0.460972 0.467919 -0.0069470 4.9506e-01 5.7949e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 4.2212e-01 7.6882e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0078376 9.4109e-01 lowCoverage 1.0000e+00 lowCoverage 0.3032015 0.5198238 -0.01297827 5 0.460972 0.484576 -0.02360426 6.6980e-01 3.1661e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.5651e-01 5.5196e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0259467 3.8134e-01 lowCoverage 1.000000 lowCoverage 0.2314694 0.3554817 -0.01120434 4 0.457380 0.4679192 -0.0105392 5.0458e-01 4.6160e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 5.7781e-01 3.8212e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage -0.0396042 7.1453e-01 lowCoverage 1.0000e+00 lowCoverage 0.2311688 0.5208791 -1.7031e-02 4 0.381150 0.5704803 -0.18933032 9.6172e-01 4.5756e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.0463e-01 6.8216e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage -0.0733885 0.05102701 lowCoverage 1.000000 lowCoverage 0.3554817 0.5198238 -0.00767763 4 0.467919 0.484576 -0.0166572 5.6759e-01 4.5345e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 4.8003e-01 5.7757e-01 lowCoverage 1.00000000 1.0000e+00 lowCoverage -0.0337844 7.5335e-01 lowCoverage 1.0000e+00 lowCoverage chr7 100532135 100533135 27709 TRIM56 ENSG00000169871 0.844423 253 9 0.7491461 296 9 0.7458155 142 9 0.840826 255 9 0.794469 123 8 0.839228 378 9 0.696859 156 9 0.787121 169 7 0.786179 156 9 0.9057870 126 7 0.865942 364 9 0.7023384 92 7 0.7600100 144 7 0.6590965 57 6 0.78855658 141 7 0.787415 76 5 0.697911 80 7 0.7243396 191 9 0.873328 175 9 0.791723 264 9 0.734127 78 8 0.777041 83 6 0.768253 209 9 0.7702939 147 9 0.804714 72 6 0.7297482 278 9 0.783630 90 7 0.7258181 116 9 0.762269 155 9 0.7858561 310 9 0.821464 334 9 0.8175484 337 9 0.7005502 240 9 0.853870 115 9 0.71772856 419 9 0.8135161 87 8 0.657612 219 9 0.8182540 194 9 0.8530684 294 9 0.8166212 308 9 0.8544655 274 9 0.873672 162 9 0.8761321 257 9 0.850816 0.7605304 0.7438148 0.8169383 0.7848116 0.828685 0.7802856 0.7999768 0.790740 0.8994647 0.826446 0.6828251 0.8676508 0.7802539 0.8023075 0.8234470 0.7493777 0.8856573 0.88123658 0.7863495 0.710526 0.8177174 0.850530 0.7861383 0.8910255 0.8257755 0.842643 0.8341856 0.773946 0.8061481 0.8126723 0.7855150 0.7914407 0.8345756 0.7847290 0.8450002 0.784291 0.8069543 0.8443011 0.8045920 0.8407695 0.8802474 0.8830141 5 0.8265054 0.8275238 2.8028e-03 9 0.787361 0.708528 0.07883364 3.5729e-01 8.7298e-01 insignificant 1.000000 1.0000e+00 insignificant 0.5169873 0.64515795 insignificant 1 1.00000 insignificant 0.00862890 0.6257704 insignificant 1 insignificant 0.8262782 0.8375196 0.0308799 9 0.721748 0.628487 0.0932605 5.7288e-02 9.6498e-01 insignificant 3.9509e-01 1.0000e+00 insignificant 7.3209e-01 9.4734e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0217706 5.5669e-01 insignificant 1.0000e+00 insignificant 0.8273203 0.8895753 -0.03199212 9 0.832764 0.861044 -0.02827979 9.9691e-01 7.1015e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9402e-01 1.4589e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0727662 7.7762e-04 weaklyHypometh 0.072157 weaklyHypometh 0.8275238 0.8388365 0.02514238 9 0.708528 0.6856226 0.0229051 9.4009e-02 8.8141e-01 insignificant 6.1444e-01 1.0000e+00 insignificant 4.2977e-01 8.6106e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0131417 7.0788e-01 insignificant 1.0000e+00 insignificant 0.8289474 0.8895753 -3.5309e-02 9 0.759380 0.8610439 -0.10166346 9.9761e-01 2.8070e-02 weaklyHypometh 1.0000e+00 7.1308e-01 insignificant 9.8253e-01 9.7024e-02 insignificant 1.0000e+00 1.000000 insignificant -0.0813951 0.00016764 weaklyHypometh 0.083819 weaklyHypometh 0.8394965 0.8895753 -0.05547001 9 0.754185 0.861044 -0.1068591 9.9697e-01 1.8210e-02 weaklyHypometh 1.0000e+00 1.6001e-01 insignificant 9.9729e-01 2.3014e-01 insignificant 1.00000000 1.0000e+00 insignificant -0.0945368 3.0907e-02 weaklyHypometh 3.5525e-01 insignificant chr7 100694535 100695535 27720 FIS1 ENSG00000214253 0.787029 93 7 0.9037698 185 7 0.7860119 54 6 0.812922 67 4 0.845238 42 2 0.877273 227 8 0.886905 49 6 0.867354 109 7 0.758547 74 6 0.8718750 71 6 0.926794 266 7 0.9583333 23 2 0.9072173 127 6 0.9642857 32 2 0.83125000 66 5 0.833333 23 0 0.792857 30 2 0.7986159 104 7 0.804866 184 7 0.853983 227 8 0.884354 28 2 0.739583 27 2 0.841258 71 7 0.9260417 98 4 0.718750 14 1 0.8843229 175 8 0.689557 71 6 0.9147727 47 3 0.809624 117 7 0.8961257 183 8 0.918817 176 8 0.8578328 271 7 0.6310252 105 8 0.707853 78 6 0.65962683 112 6 0.5768398 42 4 0.701410 107 7 0.6239625 207 8 0.7768429 40 2 0.8607887 110 7 0.9187500 46 4 0.950000 44 5 0.9571429 61 7 0.875405 0.8742945 0.8391755 0.8372129 0.8983686 0.907163 0.9021348 0.8797449 0.827117 0.9118056 0.903964 0.8858025 0.8883377 0.9556028 0.8912037 0.9230897 0.8657788 0.8940660 0.88293018 0.8852179 0.898115 0.8881173 0.900115 0.9645833 0.7145535 0.9303947 0.698330 0.9239618 0.789928 0.9342427 0.8940968 0.9196338 0.5861615 0.6675451 0.6757818 0.5801787 0.667196 0.6602809 0.8567486 0.8668430 0.9675926 0.9088404 0.9047619 1 0.8928397 0.9068858 -1.9295e-02 7 0.856750 0.866598 -0.00984836 2.2821e-01 3.9766e-02 weaklyHypometh 1.000000 1.0000e+00 insignificant 0.4096260 0.13546002 insignificant 1 1.00000 insignificant 0.01333645 0.6302346 insignificant 1 insignificant 0.8928397 0.7081413 0.1971381 7 0.856750 0.693844 0.1629059 5.5998e-18 9.9918e-01 weaklyHypermeth 2.3332e-16 1.0000e+00 weaklyHypermeth 1.2498e-08 9.9755e-01 weaklyHypermeth 4.8068e-07 1.0000e+00 weaklyHypermeth 0.2033035 1.0192e-05 hypermethylated 5.0959e-04 hypermethylated 0.8928397 0.9036545 -0.01244416 7 0.856750 0.868540 -0.01179020 6.8608e-01 2.9767e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.8912e-01 1.7098e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0392819 3.2320e-01 insignificant 1.000000 insignificant 0.9068858 0.7081413 0.20668210 7 0.866598 0.6938441 0.1727543 6.8003e-11 9.9893e-01 hypermethylated 2.1936e-09 1.0000e+00 hypermethylated 3.4527e-06 9.9571e-01 hypermethylated 1.1906e-04 1.00000000 hypermethylated 0.1899670 2.1059e-05 weaklyHypermeth 1.1084e-03 weaklyHypermeth 0.9068858 0.9036545 -1.0806e-03 7 0.866598 0.8685402 -0.00194184 4.3581e-01 4.3159e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.2779e-01 2.0938e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0526183 0.23597146 insignificant 1.000000 insignificant 0.7081413 0.9036545 -0.20019708 7 0.693844 0.868540 -0.1746961 9.9964e-01 3.3179e-06 hypomethylated 1.0000e+00 8.7313e-05 hypomethylated 9.9999e-01 6.9862e-06 hypomethylated 1.00000000 3.0375e-04 hypomethylated -0.2425853 5.2428e-04 hypomethylated 2.7594e-02 hypomethylated chr7 100831835 100832835 27722 EMID2 ENSG00000160963 0.218465 110 5 0.2100503 130 5 0.1884240 179 5 0.372358 70 3 0.191667 149 5 0.309140 144 5 0.242082 155 5 0.221081 136 5 0.228687 160 5 0.3776190 114 4 0.396368 165 5 0.3486215 151 5 0.1138740 163 5 NA 0 0 0.20033045 115 5 0.216609 210 5 0.138319 147 5 0.2241176 102 4 0.128148 128 5 0.244177 141 5 0.397789 62 3 0.016000 78 3 0.250619 99 5 0.2974074 63 3 0.413743 38 3 0.1440846 204 5 0.176348 79 5 0.0977193 61 3 0.199733 83 3 0.1467881 186 5 0.186384 148 5 0.4162312 189 5 0.0571441 176 5 0.064286 87 3 0.15847743 219 3 0.0363636 36 3 0.091111 67 5 0.0333333 138 5 0.2343677 104 3 0.1730303 121 5 0.1939394 61 3 0.327519 105 5 0.2511653 109 3 0.255252 0.1819029 0.1624084 0.2659214 0.2286736 0.271640 0.2128823 0.2021567 0.238595 0.3775336 0.450743 0.2637200 0.1225869 NA 0.2188912 0.2472542 0.1037091 0.2341279 0.10394112 0.1937547 0.321825 0.0082051 0.302256 0.3330128 0.2899466 0.0754020 0.142229 0.1031264 0.209554 0.1140203 0.1993481 0.4626838 0.0368134 0.0279304 0.0598769 0.0186480 0.034972 0.0092593 0.1664987 0.0879808 0.1762821 0.2057066 0.1504938 1 0.2289247 0.2147287 1.2973e-02 5 0.228185 0.218381 0.00980335 4.3335e-01 7.5045e-01 insignificant 1.000000 1.0000e+00 insignificant 0.0588792 0.95789623 insignificant 1 1.00000 insignificant 0.01196302 0.7794432 lowCoverage 1 lowCoverage 0.2289247 0.0857538 0.1462629 5 0.228185 0.081263 0.1469213 3.2694e-09 1.0000e+00 weaklyHypermeth 7.1073e-08 1.0000e+00 weaklyHypermeth 6.4909e-09 1.0000e+00 weaklyHypermeth 2.6610e-07 1.0000e+00 weaklyHypermeth 0.1670810 1.3975e-05 lowCoverage 6.3521e-04 lowCoverage 0.2289247 0.1880000 0.03839751 4 0.228185 0.246644 -0.01845964 2.3123e-02 3.1927e-03 lowCoverage 6.4231e-01 1.1498e-01 lowCoverage 6.0435e-03 1.1736e-01 lowCoverage 3.0217e-01 1.0000e+00 lowCoverage 0.0045293 8.9374e-01 lowCoverage 1.000000 lowCoverage 0.2147287 0.0857538 0.14323041 5 0.218381 0.0812633 0.1371180 9.2643e-05 9.9991e-01 weaklyHypermeth 1.3235e-03 1.0000e+00 weaklyHypermeth 1.8900e-05 9.9978e-01 weaklyHypermeth 5.5432e-04 1.00000000 weaklyHypermeth 0.1551180 2.1221e-03 lowCoverage 4.8230e-02 lowCoverage 0.2147287 0.1880000 7.5225e-05 4 0.218381 0.2466443 -0.02826298 2.1787e-01 8.5043e-03 lowCoverage 1.0000e+00 3.2709e-01 lowCoverage 9.8138e-02 1.0647e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage -0.0074337 0.87387376 lowCoverage 1.000000 lowCoverage 0.0857538 0.1880000 -0.13245372 4 0.081263 0.246644 -0.1653810 9.9751e-01 3.2991e-07 lowCoverage 1.0000e+00 1.1376e-05 lowCoverage 9.9038e-01 2.6521e-04 lowCoverage 1.00000000 8.2878e-03 lowCoverage -0.1625518 1.3449e-03 lowCoverage 4.6376e-02 lowCoverage chr7 101147435 101148435 27728 ENSG00000214247 0.789607 269 10 0.7245588 292 9 0.5323061 230 9 0.649761 264 8 0.683145 162 10 0.770042 482 10 0.684273 255 9 0.689184 265 10 0.520266 232 9 0.7771578 197 10 0.754961 283 9 0.7259249 107 7 0.5482829 223 9 0.8468065 136 7 0.66286416 211 9 0.583577 99 6 0.373593 86 7 0.4877545 274 8 0.775272 212 7 0.685488 334 10 0.651833 106 9 0.531527 124 5 0.722226 158 6 0.6241814 141 10 0.586869 64 5 0.6397193 286 9 0.642151 146 9 0.6696742 113 8 0.747752 175 9 0.7283318 328 9 0.618010 305 9 0.8004574 374 10 0.3669349 244 9 0.480763 213 9 0.32494178 298 9 0.2142857 80 4 0.559217 186 10 0.3105838 339 10 0.5208751 263 9 0.7361875 238 9 0.6525922 182 7 0.472251 264 9 0.6824783 206 9 0.848095 0.7442066 0.5786095 0.7578682 0.6741402 0.817933 0.7503413 0.6897204 0.584609 0.7221257 0.785731 0.7458054 0.6037338 0.7610782 0.6849027 0.6949780 0.5032159 0.4654575 0.78811539 0.6592166 0.722735 0.4560200 0.775388 0.5879881 0.6413060 0.6579884 0.661956 0.8221351 0.775748 0.7710335 0.5527624 0.8509395 0.3378616 0.4898457 0.2421992 0.1807435 0.516122 0.2734155 0.6881680 0.7168926 0.6504577 0.5217721 0.7188090 5 0.7182824 0.7347995 -1.7211e-02 9 0.551798 0.693490 -0.14169252 9.8906e-01 3.8417e-01 insignificant 1.000000 1.0000e+00 insignificant 0.9733429 0.62261300 insignificant 1 1.00000 insignificant -0.00031978 0.9926804 insignificant 1 insignificant 0.7185941 0.4665195 0.2873720 9 0.652125 0.368195 0.2839297 6.0081e-28 9.9966e-01 hypermethylated 2.8610e-26 1.0000e+00 hypermethylated 6.6298e-14 9.9953e-01 hypermethylated 6.0271e-12 1.0000e+00 hypermethylated 0.2871201 1.0561e-03 weaklyHypermeth 2.7792e-02 weaklyHypermeth 0.7185330 0.7389419 0.02403824 9 0.570003 0.543705 0.02629770 9.0413e-03 7.9761e-01 weaklyHypermeth 3.0138e-01 1.0000e+00 insignificant 3.1797e-01 8.5855e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0503644 4.0625e-01 insignificant 1.000000 insignificant 0.7348877 0.4669118 0.30208452 9 0.640170 0.4208452 0.2193247 6.4260e-18 1.0000e+00 hypermethylated 2.9209e-16 1.0000e+00 hypermethylated 4.8994e-09 9.9981e-01 hypermethylated 2.7219e-07 1.00000000 hypermethylated 0.2874399 1.3321e-03 weaklyHypermeth 3.4155e-02 weaklyHypermeth 0.7348354 0.7389419 4.6932e-02 9 0.690675 0.5437053 0.14696965 2.8512e-02 8.7323e-01 weaklyHypermeth 8.3860e-01 1.0000e+00 insignificant 1.4305e-01 8.3258e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0506842 0.39016820 insignificant 1.000000 insignificant 0.4671587 0.7400000 -0.22718646 9 0.380014 0.602446 -0.2224321 9.9998e-01 9.9708e-10 hypomethylated 1.0000e+00 4.1545e-08 hypomethylated 1.0000e+00 1.7667e-07 hypomethylated 1.00000000 1.0392e-05 hypomethylated -0.2367557 9.0318e-03 weaklyHypometh 1.5845e-01 insignificant chr7 101163435 101164435 27731 ENSG00000214247 0.468873 277 5 0.5399184 232 8 0.5726658 223 10 0.461827 240 4 0.500378 240 8 0.628358 484 7 0.518996 281 12 0.531775 221 8 0.431834 196 7 0.4983251 142 4 0.501251 363 9 0.5826959 159 8 0.4615801 215 6 0.8265306 113 3 0.46809380 233 5 0.219612 71 4 0.053613 44 3 0.1475478 329 5 0.248609 411 5 0.514691 319 6 0.440518 109 8 0.297109 70 4 0.405825 302 4 0.5081409 137 8 0.269748 55 4 0.3921676 362 9 0.334299 355 6 0.5268954 89 3 0.594944 350 7 0.4590428 383 9 0.560350 403 10 0.4803072 346 9 0.1135066 286 9 0.121439 278 7 0.27586207 315 7 0.0000000 21 2 0.078208 264 6 0.2893519 400 7 0.2958090 300 5 0.2877935 277 8 0.1127224 215 5 0.061231 410 5 0.3052798 204 4 0.296078 0.2194460 0.2645154 0.2480845 0.1752926 0.343651 0.2446049 0.1953362 0.204658 0.2651010 0.289979 0.2204403 0.1553557 0.2525323 0.2217580 0.2928707 0.2262723 0.2217371 0.17145024 0.2893159 0.315457 0.2112593 0.298399 0.3307659 0.3299787 0.2796373 0.262321 0.2487932 0.262246 0.2595923 0.2743371 0.4068030 0.0095845 0.0099340 0.0000000 0.0052700 0.041870 0.0091826 0.1568432 0.1647471 0.1331049 0.0886343 0.2471118 4 0.3107262 0.3518080 -4.1044e-02 8 0.565876 0.536583 0.02929341 8.8131e-01 2.8018e-01 insignificant 1.000000 1.0000e+00 insignificant 0.5041009 0.41492817 insignificant 1 1.00000 insignificant 0.01974640 0.6902926 insignificant 1 insignificant 0.3104384 0.0294118 0.2788956 7 0.494020 0.235209 0.2588116 1.6191e-35 1.0000e+00 hypermethylated 1.0683e-33 1.0000e+00 hypermethylated 2.3797e-13 1.0000e+00 hypermethylated 1.6998e-11 1.0000e+00 hypermethylated 0.3124641 1.9638e-04 hypermethylated 6.1369e-03 hypermethylated 0.3012535 0.1721195 0.11528125 5 0.507346 0.359418 0.14792793 2.8096e-10 1.0000e+00 weaklyHypermeth 4.0137e-08 1.0000e+00 weaklyHypermeth 5.3462e-04 1.0000e+00 weaklyHypermeth 4.4552e-02 1.0000e+00 weaklyHypermeth 0.2462915 4.1517e-03 weaklyHypermeth 0.211830 insignificant 0.3518268 0.0294306 0.32929386 7 0.542680 0.2548095 0.2878702 1.0148e-31 9.9958e-01 hypermethylated 7.2487e-30 1.0000e+00 hypermethylated 2.5491e-11 9.9988e-01 hypermethylated 1.6994e-09 1.00000000 hypermethylated 0.2927177 4.5629e-04 hypermethylated 1.4259e-02 hypermethylated 0.3469945 0.1721195 1.5994e-01 5 0.514092 0.3594177 0.15467455 2.9315e-10 9.9984e-01 weaklyHypermeth 5.8629e-08 1.0000e+00 weaklyHypermeth 3.7500e-04 9.9982e-01 weaklyHypermeth 4.6875e-02 1.000000 weaklyHypermeth 0.2265451 0.00728613 weaklyHypermeth 0.404785 insignificant 0.0181465 0.1721195 -0.15636946 4 0.196156 0.359418 -0.1632618 1.0000e+00 1.3365e-06 lowCoverage 1.0000e+00 3.9310e-05 lowCoverage 1.0000e+00 4.6549e-04 lowCoverage 1.00000000 1.3300e-02 lowCoverage -0.0661725 3.6892e-01 insignificant 1.0000e+00 insignificant chr7 101172635 101173635 27732 ENSG00000214247 0.502443 379 6 0.6513200 377 5 0.5192850 176 5 0.402057 204 7 0.628262 150 5 0.418234 1293 7 0.527953 388 5 0.497391 362 5 0.667406 341 5 0.5708061 273 5 0.536239 165 5 0.6250322 193 5 0.5667583 460 5 NA 0 0 0.64383972 473 5 0.596710 186 5 0.559077 354 7 0.4467726 250 7 0.557631 412 7 0.309899 1046 6 0.498204 251 5 0.570571 445 5 0.358086 224 5 0.6550669 447 5 0.658205 436 5 0.6527301 475 7 0.581210 634 5 0.5633711 183 5 0.548267 355 5 0.3828854 511 7 0.664254 378 7 0.7342341 1951 7 0.4800833 250 5 0.558055 406 5 0.57666013 185 7 0.6238353 652 5 0.545209 257 5 0.5354473 376 7 0.7324806 297 7 0.5658445 353 7 0.5201477 293 7 0.643226 370 7 0.5908011 237 7 0.572441 0.6167266 0.4945303 0.5598662 0.6050717 0.578255 0.5618128 0.5364432 0.595215 0.5956877 0.499008 0.6053579 0.5631463 NA 0.6091537 0.5671901 0.5317765 0.5693687 0.61587640 0.5808691 0.490961 0.5454868 0.524322 0.6195695 0.6200572 0.5980784 0.589727 0.5108386 0.564194 0.5868102 0.6334572 0.6338516 0.4513282 0.5697188 0.4653956 0.6071577 0.555757 0.5804513 0.5839234 0.5963846 0.5765005 0.6001096 0.5954119 5 0.5754250 0.5824980 -2.7628e-02 5 0.353172 0.337942 0.01522956 9.9588e-01 5.6745e-02 insignificant 1.000000 1.0000e+00 insignificant 0.9974305 0.41823436 insignificant 1 1.00000 insignificant -0.03398785 0.3983809 insignificant 1 insignificant 0.5760826 0.5272813 0.0315987 6 0.513884 0.529717 -0.0158331 5.2046e-03 4.4764e-01 weaklyHypermeth 4.7749e-02 1.0000e+00 weaklyHypermeth 7.1938e-02 9.3634e-01 insignificant 6.0964e-01 1.0000e+00 insignificant -0.0149459 6.1290e-01 insignificant 1.0000e+00 insignificant 0.5760054 0.6205559 -0.02145038 7 0.456786 0.523621 -0.06683494 3.6383e-01 1.4647e-07 weaklyHypometh 1.0000e+00 4.8823e-05 weaklyHypometh 8.1330e-01 1.9926e-04 weaklyHypometh 1.0000e+00 3.3543e-02 weaklyHypometh -0.0722308 1.3091e-01 insignificant 1.000000 insignificant 0.5831475 0.5272813 0.05433132 5 0.591399 0.5297173 0.0616819 3.5792e-04 9.9794e-01 weaklyHypermeth 4.5306e-03 1.0000e+00 weaklyHypermeth 1.2937e-02 9.8366e-01 weaklyHypermeth 1.4870e-01 1.00000000 insignificant 0.0190420 6.2540e-01 insignificant 1.0000e+00 insignificant 0.5829618 0.6201550 9.6346e-03 5 0.473119 0.4712588 0.00186051 3.2551e-01 5.4809e-05 inconclusive 1.0000e+00 7.8299e-03 inconclusive 9.4448e-01 1.7062e-02 inconclusive 1.0000e+00 0.839272 insignificant -0.0382429 0.45303034 insignificant 1.000000 insignificant 0.5272813 0.6209573 -0.05030714 6 0.529717 0.589074 -0.0593562 6.1041e-01 1.4630e-07 weaklyHypometh 1.0000e+00 5.2252e-06 weaklyHypometh 8.6052e-01 2.9090e-04 weaklyHypometh 1.00000000 8.8150e-03 weaklyHypometh -0.0572849 2.1273e-01 insignificant 1.0000e+00 insignificant chr7 101286135 101287135 27739 CUX1 ENSG00000160967 0.776850 131 6 0.4601594 176 6 0.3446866 243 6 0.642219 192 6 0.419900 130 6 0.679352 265 7 0.717361 152 6 0.447923 162 6 0.555059 258 6 0.5393847 276 6 0.646864 181 6 0.4414290 210 6 0.5446496 255 6 0.7251704 171 6 0.51631496 273 6 0.331330 215 6 0.195139 63 5 0.5264243 255 6 0.105464 159 6 0.578737 164 6 0.646825 71 7 0.554001 147 6 0.595820 138 6 0.4691209 124 6 0.588150 91 6 0.7335988 204 6 0.472694 166 6 0.7112381 137 8 0.412723 164 6 0.7469520 230 6 0.368403 213 6 0.7331212 170 6 0.0781523 230 6 0.416616 110 6 0.00000000 39 3 0.1468254 38 3 0.327734 150 7 0.1256757 257 6 0.5889795 208 6 0.6134486 189 6 0.7499134 151 5 0.495898 164 6 0.6258503 179 6 0.736914 0.5598842 0.4383090 0.6598810 0.4605073 0.758261 0.8371487 0.6596334 0.574885 0.6523690 0.681101 0.5376040 0.5441150 0.6808626 0.6848858 0.4609738 0.2201443 0.5524980 0.15463575 0.5703298 0.889610 0.4675364 0.700953 0.6561885 0.6914879 0.8055839 0.660774 0.6975219 0.461883 0.7410223 0.2767710 0.7211312 0.1087510 0.1665029 0.0187678 0.2288745 0.344368 0.1875153 0.8165031 0.8063044 0.7302846 0.6190494 0.7615584 6 0.5909438 0.6226415 -3.9119e-02 6 0.573787 0.584911 -0.01112430 9.1856e-01 2.3918e-01 insignificant 1.000000 1.0000e+00 insignificant 0.9602093 0.28003585 insignificant 1 1.00000 insignificant -0.07633319 0.1731407 insignificant 1 insignificant 0.5911292 0.1771845 0.4077170 6 0.568544 0.246948 0.3215960 3.2504e-18 9.9979e-01 hypermethylated 1.4132e-16 1.0000e+00 hypermethylated 5.3639e-10 1.0000e+00 hypermethylated 2.8231e-08 1.0000e+00 hypermethylated 0.3272201 1.8615e-03 weaklyHypermeth 4.1366e-02 weaklyHypermeth 0.5908163 0.7463524 -0.15593658 6 0.520604 0.491271 0.02933378 7.3285e-01 1.5413e-03 weaklyHypometh 1.0000e+00 9.0666e-02 weaklyHypometh 8.9545e-01 8.8002e-04 weaklyHypometh 1.0000e+00 8.0002e-02 weaklyHypometh -0.1050971 8.5853e-02 insignificant 1.000000 insignificant 0.6229686 0.1771845 0.44799969 6 0.594750 0.2469479 0.3478023 1.9051e-14 9.9999e-01 hypermethylated 8.2830e-13 1.0000e+00 hypermethylated 4.6380e-09 1.0000e+00 hypermethylated 2.7219e-07 1.00000000 hypermethylated 0.4035533 5.0366e-04 hypermethylated 1.5262e-02 hypermethylated 0.6224157 0.7463524 -1.1270e-01 6 0.577500 0.4912706 0.08622967 2.4293e-01 5.9257e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 6.2879e-01 7.3566e-02 insignificant 1.0000e+00 1.000000 insignificant -0.0287639 0.61709555 insignificant 1.000000 insignificant 0.1763990 0.7463524 -0.55997445 6 0.218831 0.491271 -0.2724396 8.2626e-01 3.3801e-17 hypomethylated 1.0000e+00 2.4144e-15 hypomethylated 9.8631e-01 7.8861e-07 hypomethylated 1.00000000 3.9431e-05 hypomethylated -0.4323173 4.3671e-04 hypomethylated 2.4262e-02 hypomethylated chr7 101332835 101333835 27746 CUX1 ENSG00000160967 0.545347 76 5 0.7003968 111 4 0.4973840 104 5 0.693636 59 5 0.536272 82 4 0.635534 194 5 0.719336 54 4 0.626651 126 5 0.778439 70 4 0.8274510 44 4 0.540119 198 5 0.5555556 33 4 0.8044715 127 5 0.6328172 62 5 0.62712094 101 5 0.437500 22 3 0.750000 5 0 0.6526166 93 5 0.819129 148 5 0.710660 121 6 0.712433 59 4 0.623162 78 5 0.677161 87 5 0.6111111 61 5 0.837607 42 4 0.7525824 181 5 0.505510 146 6 0.4312030 47 4 0.543650 138 4 0.6588306 199 5 0.509835 101 5 0.7821808 62 5 0.6451220 100 5 1.000000 64 4 0.66666667 28 1 0.6400000 17 1 0.695707 120 5 0.8114554 121 5 0.2681406 70 4 0.5689815 46 4 0.4587302 38 4 0.459444 59 5 0.8380567 60 4 0.498897 0.5391553 0.4767602 0.6856325 0.6000680 0.496706 0.6422214 0.4904233 0.599974 0.7835939 0.706615 0.5104895 0.7152563 0.6138407 0.5155735 0.5140388 NA 0.6417733 0.68059970 0.6298792 0.605391 0.6209893 0.585667 0.7257187 0.6643357 0.6768680 0.564576 0.5738314 0.626354 0.6462694 0.5688167 0.7732570 0.6439024 1.0000000 0.9701745 0.4993007 0.675703 0.6250262 0.3942391 0.6287879 0.3001443 0.3548951 0.6606551 4 0.6065574 0.6203164 -2.9072e-02 5 0.594096 0.634806 -0.04070981 5.3019e-01 2.4015e-01 insignificant 1.000000 1.0000e+00 insignificant 0.7877042 0.35039323 insignificant 1 1.00000 insignificant 0.01741638 0.6932413 lowCoverage 1 lowCoverage 0.6065574 0.6822222 -0.0821568 5 0.594096 0.660082 -0.0659854 7.3295e-01 3.2116e-04 weaklyHypometh 1.0000e+00 2.4704e-02 weaklyHypometh 9.3743e-01 2.3612e-03 weaklyHypometh 1.0000e+00 2.6235e-01 insignificant -0.0886367 2.0000e-01 lowCoverage 1.0000e+00 lowCoverage 0.6074561 0.4615385 0.13245528 4 0.631348 0.450668 0.18068002 2.3240e-03 9.9374e-01 lowCoverage 1.0105e-01 1.0000e+00 lowCoverage 4.7591e-02 9.9626e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.1358512 2.2389e-01 lowCoverage 1.000000 lowCoverage 0.6203164 0.6822222 -0.05432458 5 0.634806 0.6600816 -0.0252756 9.9587e-01 1.0143e-02 weaklyHypometh 1.0000e+00 6.7621e-01 insignificant 9.8899e-01 2.4823e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant -0.1060531 1.5123e-01 lowCoverage 1.0000e+00 lowCoverage 0.6200000 0.4615385 1.6148e-01 4 0.582635 0.4506681 0.13196742 8.7359e-04 9.9333e-01 lowCoverage 4.3680e-02 1.0000e+00 lowCoverage 2.2525e-02 9.9831e-01 lowCoverage 8.6634e-01 1.000000 lowCoverage 0.1184348 0.28728742 lowCoverage 1.000000 lowCoverage 0.6837416 0.4615385 0.21491321 4 0.754379 0.450668 0.3037110 5.5282e-03 9.9996e-01 lowCoverage 5.0256e-01 1.0000e+00 lowCoverage 3.4544e-03 9.9999e-01 lowCoverage 0.49349119 1.0000e+00 lowCoverage 0.2244878 8.0884e-02 lowCoverage 7.4892e-01 lowCoverage chr7 101343035 101344035 27747 CUX1 ENSG00000160967 0.768091 134 6 0.5475242 137 5 0.7163600 93 5 0.905868 138 6 0.836818 57 5 0.910732 196 6 0.798291 53 5 0.764740 114 6 0.683326 108 4 0.7201792 114 5 0.877451 90 5 0.8983333 58 4 0.8191799 105 5 0.7870915 81 5 0.78626437 104 5 0.667361 48 4 0.840491 48 4 0.8944309 111 6 0.864959 76 6 0.858468 107 5 0.633333 34 4 0.828706 122 5 0.786509 89 5 0.7423942 58 5 0.833712 104 5 0.8194839 100 6 0.528839 124 5 0.5390083 126 5 0.923379 77 5 0.7442177 99 6 0.868787 108 6 0.8637942 108 6 0.6705089 125 6 0.560944 79 5 0.31333333 40 3 0.4555556 33 3 0.351816 172 7 0.5491453 92 6 0.8315355 78 5 0.9294913 97 6 0.9528571 100 5 0.671948 82 4 0.8639830 140 6 0.833939 0.6899815 0.7960005 0.8916724 0.8139844 0.904430 0.7781243 0.8149232 0.760958 0.8471809 0.848493 0.8700075 0.9386053 0.9059059 0.7540007 0.6463964 0.8234853 0.8922250 0.85207925 0.8087935 0.673611 0.8038646 0.731267 0.6506856 0.8397761 0.8358383 0.573140 0.6729173 0.910076 0.8490562 0.8257390 0.8197686 0.6876953 0.4429914 0.2626877 0.4984985 0.357757 0.6690922 0.8315783 0.9114265 0.9277477 0.9143079 0.8870244 3 0.8284264 0.7700348 5.8593e-02 5 0.746526 0.673895 0.07263095 3.6068e-02 6.3674e-01 weaklyHypermeth 1.000000 1.0000e+00 insignificant 0.0409637 0.86056732 weaklyHypermeth 1 1.00000 insignificant 0.03795108 0.3866009 insignificant 1 insignificant 0.8283393 0.4990758 0.2977701 5 0.710315 0.475573 0.2347423 2.5277e-16 1.0000e+00 hypermethylated 9.3620e-15 1.0000e+00 hypermethylated 1.4734e-06 9.8714e-01 hypermethylated 4.4650e-05 1.0000e+00 hypermethylated 0.3137476 1.4316e-03 weaklyHypermeth 3.3293e-02 weaklyHypermeth 0.8283393 0.8933602 -0.06371980 5 0.710315 0.835983 -0.12566813 9.9964e-01 1.5543e-02 weaklyHypometh 1.0000e+00 4.0902e-01 insignificant 9.9654e-01 2.5204e-02 weaklyHypometh 1.0000e+00 7.1270e-01 insignificant -0.0526650 3.6907e-01 insignificant 1.000000 insignificant 0.7707062 0.4990758 0.26664433 5 0.770165 0.4755726 0.2945927 1.1509e-13 9.9999e-01 hypermethylated 4.7953e-12 1.0000e+00 hypermethylated 2.8175e-06 9.9971e-01 hypermethylated 1.0435e-04 1.00000000 hypermethylated 0.2757965 2.2237e-03 weaklyHypermeth 4.8341e-02 weaklyHypermeth 0.7707062 0.8933602 -1.2501e-01 5 0.770165 0.8359831 -0.06581778 9.8661e-01 1.3156e-03 weaklyHypometh 1.0000e+00 8.2714e-02 weaklyHypometh 9.7810e-01 2.9641e-04 weaklyHypometh 1.0000e+00 0.098803 weaklyHypometh -0.0906161 0.17857632 insignificant 1.000000 insignificant 0.4990758 0.8933602 -0.35422265 5 0.475573 0.835983 -0.3604104 9.9999e-01 6.4159e-11 hypomethylated 1.0000e+00 2.9163e-09 hypomethylated 9.9997e-01 4.0204e-05 hypomethylated 1.00000000 1.6082e-03 hypomethylated -0.3664125 8.1912e-04 hypomethylated 3.1885e-02 hypomethylated chr7 101351635 101352635 27748 CUX1 ENSG00000160967 0.611275 114 5 0.5865530 110 5 0.4283066 66 5 0.625749 129 5 0.664037 95 5 0.617863 320 5 0.565608 82 5 0.650806 137 5 0.588889 87 5 0.5953707 94 5 0.629655 182 5 0.5393484 54 4 0.6856285 104 5 0.7153221 55 4 0.78414432 115 5 0.347059 51 3 0.583333 29 3 0.5641525 102 5 0.621609 85 5 0.609316 200 5 0.567179 33 4 0.501520 70 5 0.786466 58 3 0.5233333 36 4 0.555000 52 5 0.6128678 133 5 0.596508 59 5 0.5422527 39 5 0.583704 56 5 0.6218616 122 5 0.583995 105 5 0.6444901 217 5 0.6305556 149 5 0.501841 57 4 0.66052288 118 5 0.3533333 18 2 0.595455 68 5 0.6521390 103 5 0.6147216 94 5 0.6390321 92 5 0.6142247 68 4 0.528781 67 5 0.6201624 125 5 0.574742 0.5591588 0.4205398 0.5855270 0.6358549 0.547000 0.4546937 0.6310503 0.517470 0.5485677 0.576920 0.4854826 0.6780874 0.7230282 0.7772443 0.3491799 0.4776521 0.5379165 0.58655626 0.5636047 0.449282 0.4807090 0.764246 0.4502096 0.4878931 0.6178283 0.552451 0.4674615 0.567086 0.6095567 0.5637603 0.6156764 0.5967317 0.3878419 0.6694167 0.2777778 0.500000 0.6364645 0.5296571 0.5439973 0.5091613 0.5010208 0.5812148 3 0.5983718 0.6234694 -1.0613e-02 5 0.615666 0.609294 0.00637204 2.3679e-01 3.9870e-01 insignificant 1.000000 1.0000e+00 insignificant 0.2992562 0.66748335 insignificant 1 1.00000 insignificant 0.00743648 0.8040764 lowCoverage 1 lowCoverage 0.5983718 0.6276803 -0.0228795 5 0.615666 0.617496 -0.0018300 1.9957e-01 9.7671e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 1.4897e-01 7.3765e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0350602 5.2822e-01 lowCoverage 1.0000e+00 lowCoverage 0.5983718 0.5695067 0.01922692 5 0.615666 0.609065 0.00660157 4.1755e-01 2.5467e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.2075e-01 2.1777e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0026830 9.2570e-01 lowCoverage 1.000000 lowCoverage 0.6234694 0.6276803 -0.01413721 5 0.609294 0.6174961 -0.0082020 7.5211e-01 1.6718e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.0633e-01 2.3329e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0276237 6.1828e-01 lowCoverage 1.0000e+00 lowCoverage 0.6234694 0.5695067 2.3407e-02 5 0.609294 0.6090645 0.00022953 4.4551e-01 1.2886e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.7027e-01 1.2429e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0101195 0.72925878 lowCoverage 1.000000 lowCoverage 0.6276803 0.5695067 0.03334160 5 0.617496 0.609065 0.0084316 4.8452e-01 5.1980e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.4439e-01 3.6832e-01 insignificant 1.00000000 1.0000e+00 insignificant -0.0377433 4.9497e-01 lowCoverage 1.0000e+00 lowCoverage chr7 101357035 101358035 27749 CUX1 ENSG00000160967 0.644126 123 6 0.5439211 96 6 0.2942528 88 6 0.530739 66 6 0.366667 19 2 0.650274 134 6 0.668056 37 5 0.524288 65 6 0.556349 45 6 0.7151027 56 3 0.722459 152 6 0.4596561 46 6 0.5860747 121 6 NA 0 0 0.46165501 53 6 0.555556 28 3 0.212963 61 6 0.5721154 60 6 0.673413 77 6 0.575517 148 6 0.786401 47 5 0.257215 88 6 0.550887 104 6 0.5821549 40 5 0.577381 43 6 0.6141359 67 6 0.619048 47 5 0.5466667 16 2 0.502381 33 5 0.6375600 120 6 0.523964 136 6 0.7761643 141 6 0.8064815 64 5 0.703185 67 6 0.00000000 7 0 0.3463980 68 6 0.718067 50 4 0.6645366 74 6 0.2172966 147 6 0.4399421 202 6 0.1567130 78 6 0.299340 182 6 0.3851370 143 6 0.631555 0.5380281 0.3091027 0.4845151 0.2912698 0.663979 0.6466270 0.4751052 0.557256 0.7234283 0.725480 0.4927879 0.5783146 NA 0.4776002 0.4960317 0.2394180 0.6020626 0.65886243 0.5809341 0.714449 0.2883884 0.569574 0.4831810 0.5348639 0.6491661 0.566610 0.4539963 0.482880 0.6649482 0.5496684 0.7894504 0.8205026 0.7411448 0.1978039 0.3695535 0.666013 0.7410923 0.2519372 0.4865324 0.1500992 0.3599205 0.4672403 2 0.5688136 0.5770975 -8.7623e-03 6 0.569537 0.579475 -0.00993790 8.0326e-01 4.1864e-01 insignificant 1.000000 1.0000e+00 insignificant 0.9310268 0.29834822 insignificant 1 1.00000 insignificant -0.03836411 0.4519673 insignificant 1 insignificant 0.5688136 0.6484848 -0.0769873 6 0.569537 0.611587 -0.0420501 5.7428e-01 6.6111e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 8.0081e-01 1.6147e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0030210 9.8220e-01 lowCoverage 1.0000e+00 lowCoverage 0.5688136 0.3191489 0.21872732 6 0.569537 0.333434 0.23610296 2.2102e-10 9.9949e-01 hypermethylated 3.6837e-08 1.0000e+00 hypermethylated 3.2159e-06 9.9997e-01 hypermethylated 8.0398e-04 1.0000e+00 hypermethylated 0.2431133 4.8721e-03 weaklyHypermeth 0.211830 insignificant 0.5770975 0.6484848 -0.07088519 6 0.579475 0.6115868 -0.0321122 6.3881e-01 1.3671e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.8635e-01 1.9180e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0413851 7.6390e-01 lowCoverage 1.0000e+00 lowCoverage 0.5770975 0.3191489 2.3093e-01 6 0.579475 0.3334337 0.24604086 9.3600e-07 9.9984e-01 hypermethylated 1.1700e-04 1.0000e+00 hypermethylated 6.4070e-06 9.9976e-01 hypermethylated 2.1357e-03 1.000000 hypermethylated 0.2814774 0.00204303 weaklyHypermeth 0.227003 insignificant 0.6484848 0.3191489 0.29430851 6 0.611587 0.333434 0.2781531 7.9982e-05 9.9994e-01 hypermethylated 9.9977e-03 1.0000e+00 hypermethylated 8.3887e-04 9.9985e-01 hypermethylated 0.16777344 1.0000e+00 insignificant 0.2400923 1.2340e-01 lowCoverage 9.7169e-01 lowCoverage chr7 101364235 101365235 27750 CUX1 ENSG00000160967 0.411275 134 4 0.4333582 243 5 0.5369886 99 5 0.548631 116 5 0.456993 106 5 0.741526 238 5 0.412682 143 5 0.508884 127 5 0.441353 136 5 0.4035714 71 4 0.520582 239 5 0.3781532 85 3 0.1753759 100 4 0.4826856 81 4 0.56432749 101 4 0.181667 69 5 0.498705 781 2 0.6776726 137 4 0.489505 195 5 0.362976 182 4 0.592485 70 4 0.600000 7 0 0.375365 130 4 0.4494821 72 4 0.610000 37 4 0.4264918 287 5 0.365933 114 5 0.4391126 37 5 0.521226 180 4 0.3889388 375 5 0.569582 344 5 0.5687427 171 4 0.2034043 208 4 0.249926 141 5 0.17397757 240 5 0.1666667 15 2 0.305380 150 5 0.6380718 259 5 0.4935622 188 5 0.3971230 152 5 0.5275787 157 5 0.284675 112 4 0.5881242 157 5 0.477163 0.3445615 0.6408706 0.4861069 0.4820597 0.628023 0.3988570 0.4626504 0.435874 0.4934385 0.561326 0.2988163 0.1876836 0.4904678 0.4463484 0.1638566 0.7551989 0.5982242 0.44224427 0.4879014 0.633030 0.5930233 0.491393 0.4025228 0.6511628 0.4402599 0.411873 0.4785802 0.572336 0.4012611 0.5480945 0.5610689 0.1751608 0.2604810 0.1606587 0.2702503 0.352738 0.7293835 0.6074936 0.4532461 0.5056596 0.3242170 0.6494133 4 0.5734555 0.4786184 9.0154e-02 5 0.577562 0.423925 0.15363760 5.1720e-02 9.3804e-01 insignificant 1.000000 1.0000e+00 insignificant 0.5395610 0.30438562 insignificant 1 1.00000 insignificant -0.03093425 0.4514610 lowCoverage 1 lowCoverage 0.5733728 0.3264095 0.2510743 5 0.520083 0.326820 0.1932632 1.5785e-05 8.9649e-01 hypermethylated 2.2550e-04 1.0000e+00 hypermethylated 8.2372e-03 9.5824e-01 weaklyHypermeth 1.0838e-01 1.0000e+00 insignificant 0.1717745 6.6803e-02 lowCoverage 7.5912e-01 lowCoverage 0.5733728 0.5039164 0.05570573 5 0.520083 0.431057 0.08902636 3.5184e-01 8.6908e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.3891e-01 2.4075e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0031329 9.6063e-01 lowCoverage 1.000000 lowCoverage 0.4785950 0.3264095 0.14097477 5 0.398566 0.3268199 0.0717463 4.5496e-04 1.3065e-01 weaklyHypermeth 5.4162e-03 1.0000e+00 weaklyHypermeth 9.8020e-03 5.6475e-01 weaklyHypermeth 1.1669e-01 1.00000000 insignificant 0.2027087 3.7786e-02 lowCoverage 4.7831e-01 lowCoverage 0.4785950 0.5039164 -3.6191e-02 5 0.398566 0.4310567 -0.03249044 9.1125e-01 3.7063e-02 weaklyHypometh 1.0000e+00 8.4557e-01 insignificant 7.2656e-01 6.7225e-02 insignificant 1.0000e+00 1.000000 insignificant 0.0340672 0.58900796 lowCoverage 1.000000 lowCoverage 0.3264095 0.5039164 -0.16295306 5 0.326820 0.431057 -0.1042368 6.7471e-01 5.5415e-03 weaklyHypometh 1.0000e+00 5.5415e-02 weaklyHypometh 8.7520e-01 6.2725e-02 insignificant 1.00000000 5.6005e-01 insignificant -0.1686415 9.5728e-02 lowCoverage 8.0444e-01 lowCoverage chr7 101858635 101859635 27775 MIR548O ENSG00000221510 0.750000 18 1 0.4016011 150 6 0.4354342 109 6 0.753968 30 1 0.535831 107 5 0.814286 52 3 0.607945 89 5 0.716075 35 4 0.642460 25 3 0.7819368 55 4 0.569666 162 6 0.6708571 87 4 0.3596049 94 4 NA 0 0 0.63992870 64 4 0.561905 42 4 0.600000 63 4 0.7166667 20 2 0.579418 99 4 0.577778 22 2 0.614286 22 2 0.400000 5 0 0.499339 34 2 0.7160317 33 3 0.222222 14 1 0.4587103 127 6 0.352381 20 2 0.4833333 14 0 0.628723 67 5 0.4283670 108 5 0.477681 124 5 0.3739130 38 2 0.2937009 73 5 0.252531 94 5 0.26439344 152 4 0.0777778 32 1 0.268519 50 4 0.3398635 70 5 0.8750000 16 1 0.6638462 40 4 0.6562500 22 1 NA 0 0 0.9545455 39 1 0.500000 0.2818182 0.3857143 0.3333333 0.4455882 0.875000 0.4912587 0.4727273 0.634921 0.7946429 0.434186 0.6375712 0.1358543 NA 0.3725490 0.4000000 0.7083333 0.7916667 0.50081699 0.5333333 0.410714 0.0000000 0.456349 0.6150794 0.0000000 0.4898990 0.380952 0.3750000 0.279762 0.3712121 0.3484848 0.5000000 0.1704545 0.1367127 0.0409836 0.1224440 0.111111 0.4722222 NA 0.5666667 1.0000000 NA 1.0000000 0 0.5264750 0.5057851 4.2971e-02 5 0.531851 0.492803 0.03904801 2.0907e-01 9.7919e-01 insignificant 1.000000 1.0000e+00 insignificant 0.0029481 0.99905627 weaklyHypermeth 1 1.00000 insignificant 0.14534899 0.0064936 lowCoverage 1 lowCoverage 0.5264750 0.2229299 0.3280460 5 0.531851 0.246561 0.2852905 1.4997e-12 9.9894e-01 hypermethylated 4.4109e-11 1.0000e+00 hypermethylated 6.7312e-08 1.0000e+00 hypermethylated 2.3211e-06 1.0000e+00 hypermethylated 0.3671338 4.6519e-06 lowCoverage 2.7364e-04 lowCoverage 0.5268330 0.8119658 -0.14396532 1 0.598730 0.807954 -0.20922417 9.9983e-01 1.9786e-04 lowCoverage 1.0000e+00 1.7610e-02 lowCoverage 9.1797e-01 1.4406e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.1708125 1.0279e-01 lowCoverage 1.000000 lowCoverage 0.5057851 0.2229299 0.28246037 5 0.492803 0.2465609 0.2462425 1.8018e-08 9.9857e-01 hypermethylated 4.8698e-07 1.0000e+00 hypermethylated 1.1727e-03 9.9664e-01 weaklyHypermeth 1.8915e-02 1.00000000 weaklyHypermeth 0.2217848 9.2385e-04 lowCoverage 2.4312e-02 lowCoverage 0.5057851 0.8103448 -1.7234e-01 1 0.492803 0.7759463 -0.28314288 9.9972e-01 1.0393e-07 lowCoverage 1.0000e+00 3.4643e-05 lowCoverage 9.7804e-01 1.1510e-02 lowCoverage 1.0000e+00 0.719404 lowCoverage -0.3161615 0.01508198 lowCoverage 0.558592 lowCoverage 0.2229299 0.8103448 -0.46368068 1 0.246561 0.775946 -0.5293854 1.0000e+00 8.2710e-08 lowCoverage 1.0000e+00 3.0633e-06 lowCoverage 9.9987e-01 4.4842e-03 lowCoverage 1.00000000 7.6004e-02 lowCoverage -0.5379463 2.1018e-03 lowCoverage 6.1818e-02 lowCoverage chr7 101918535 101919535 27778 POLR2J ENSG00000005075 0.628784 604 11 0.6723648 472 11 0.4824289 415 11 0.672363 582 13 0.713213 199 11 0.635360 885 11 0.655542 386 11 0.673995 304 11 0.643864 410 10 0.7553049 167 8 0.636463 636 11 0.6703508 251 7 0.7089676 397 11 0.7061404 89 4 0.73728910 396 11 0.643243 221 8 0.545584 334 7 0.6322708 492 13 0.637130 449 9 0.620581 486 11 0.579564 127 10 0.654971 243 10 0.606409 347 11 0.7034433 256 10 0.587673 170 9 0.6355597 477 9 0.590620 240 10 0.7785484 118 9 0.750477 359 9 0.6253840 638 13 0.629276 571 11 0.5874550 943 11 0.5491720 298 11 0.653095 246 11 0.55475746 314 9 0.4507625 127 7 0.751262 292 10 0.7403451 532 11 0.7455532 533 9 0.7027496 740 11 0.5912373 586 9 0.698261 752 11 0.6294924 607 11 0.489555 0.4812368 0.4712709 0.5763792 0.5131080 0.530823 0.5012058 0.4893923 0.531721 0.5553128 0.545487 0.5244398 0.6630021 0.5058014 0.6627493 0.4989719 0.4554511 0.5618832 0.58501269 0.5707793 0.454947 0.5199232 0.487582 0.4922889 0.4829565 0.5555501 0.495121 0.6318761 0.571132 0.5710539 0.5698710 0.5232684 0.5881930 0.7237010 0.5612874 0.6191135 0.743134 0.7192406 0.6385700 0.6851781 0.6075423 0.6447082 0.6127520 7 0.5633028 0.5742927 6.4936e-03 11 0.646679 0.633176 0.01350326 3.2000e-01 3.5302e-01 insignificant 1.000000 1.0000e+00 insignificant 0.2159214 0.74233750 insignificant 1 1.00000 insignificant 0.00944689 0.6930690 insignificant 1 insignificant 0.5633028 0.6898839 -0.0657392 11 0.646679 0.652816 -0.0061368 1.3534e-02 3.4677e-05 weaklyHypometh 1.1373e-01 3.4677e-03 weaklyHypometh 4.7614e-03 4.1638e-02 weaklyHypometh 6.6130e-02 1.0000e+00 weaklyHypometh 0.0369964 4.9180e-01 insignificant 1.0000e+00 insignificant 0.5633028 0.5947794 -0.09060412 11 0.646679 0.673916 -0.02723688 9.3876e-01 2.1133e-04 weaklyHypometh 1.0000e+00 1.7610e-02 weaklyHypometh 9.6744e-01 7.3380e-04 weaklyHypometh 1.0000e+00 7.3380e-02 weaklyHypometh -0.0198967 5.4367e-01 insignificant 1.000000 insignificant 0.5742927 0.6898839 -0.07001237 11 0.633176 0.6528157 -0.0196401 4.3090e-03 2.7521e-04 weaklyHypometh 4.1835e-02 3.2983e-02 weaklyHypometh 8.9385e-03 1.2991e-01 inconclusive 1.1173e-01 1.00000000 insignificant 0.0275495 6.1476e-01 insignificant 1.0000e+00 insignificant 0.5742927 0.5947794 -9.0910e-02 11 0.633176 0.6739158 -0.04074015 6.8481e-01 3.2306e-05 weaklyHypometh 1.0000e+00 6.4613e-03 weaklyHypometh 8.6992e-01 1.9616e-04 weaklyHypometh 1.0000e+00 0.098079 weaklyHypometh -0.0293436 0.40906049 insignificant 1.000000 insignificant 0.6898839 0.5947794 -0.00181324 11 0.652816 0.673916 -0.0211001 5.8083e-01 5.2441e-02 insignificant 1.0000e+00 3.8845e-01 insignificant 7.6288e-01 1.6310e-02 weaklyHypometh 1.00000000 1.8747e-01 insignificant -0.0568930 3.3935e-01 insignificant 1.0000e+00 insignificant chr7 101932235 101933235 27780 POLR2J ENSG00000005075 0.860915 177 6 0.5074281 192 6 0.5148910 147 6 0.783836 198 10 0.794762 100 6 0.876332 195 6 0.640041 145 10 0.609241 128 6 0.756716 112 6 0.8766667 33 3 0.717607 260 10 0.6933333 26 2 0.5128788 64 6 0.8541667 61 6 0.81399398 103 6 0.728716 50 4 0.500000 2 0 0.5670792 169 6 0.723877 225 6 0.792433 99 6 0.745707 63 8 0.829808 54 2 0.734225 148 6 0.7168831 85 10 0.683333 33 1 0.7889931 112 6 0.565550 132 10 0.6299603 35 4 0.768353 122 6 0.4676805 192 6 0.676257 186 6 0.8578097 190 6 0.1896135 171 6 0.140230 150 4 0.23333333 214 6 0.2500000 24 2 0.335714 167 6 0.2526116 245 6 0.6948906 225 6 0.8146259 372 10 0.8267567 189 10 0.826007 115 6 0.8433176 220 10 0.779640 0.5083813 0.5376760 0.7353467 0.7493140 0.782952 0.6956507 0.7045664 0.697628 0.8059322 0.727342 0.5050847 0.5775424 0.8440443 0.6963408 0.6928975 0.6473920 0.5675002 0.70443271 0.8005397 0.798023 0.8402053 0.739879 0.5131154 0.7323446 0.6115518 0.619867 0.6326675 0.782221 0.6146651 0.7168388 0.7627463 0.1516826 0.1902396 0.1771590 0.2651666 0.212369 0.2004925 0.7495471 0.7414858 0.7778325 0.7943286 0.7314282 0 0.6845286 0.6918519 2.5676e-03 6 0.738934 0.701337 0.03759638 6.9113e-01 5.4807e-01 insignificant 1.000000 1.0000e+00 insignificant 0.4392204 0.70750651 insignificant 1 1.00000 insignificant 0.00086569 0.9842727 insignificant 1 insignificant 0.6842742 0.1359423 0.5003752 6 0.712827 0.225415 0.4874120 4.9725e-43 9.9999e-01 hypermethylated 6.2156e-41 1.0000e+00 hypermethylated 5.4728e-15 9.9608e-01 hypermethylated 5.4728e-13 1.0000e+00 hypermethylated 0.4726619 8.4376e-10 hypermethylated 7.0314e-08 hypermethylated 0.6842742 0.7812500 -0.07094572 6 0.712827 0.819475 -0.10664731 9.9221e-01 1.0989e-03 weaklyHypometh 1.0000e+00 7.3258e-02 weaklyHypometh 8.8611e-01 4.0431e-02 weaklyHypometh 1.0000e+00 9.0767e-01 insignificant -0.0948739 3.1402e-02 weaklyHypometh 0.668131 insignificant 0.6921365 0.1359423 0.46969424 6 0.721471 0.2254152 0.4960560 1.8753e-35 1.0000e+00 hypermethylated 1.8753e-33 1.0000e+00 hypermethylated 3.7809e-13 9.9999e-01 hypermethylated 4.2010e-11 1.00000000 hypermethylated 0.4717962 8.2715e-09 hypermethylated 2.7572e-06 hypermethylated 0.6921365 0.7812500 -7.3990e-02 6 0.721471 0.8194745 -0.09800333 9.9751e-01 9.5827e-04 weaklyHypometh 1.0000e+00 7.3713e-02 weaklyHypometh 9.6687e-01 8.2020e-02 insignificant 1.0000e+00 1.000000 insignificant -0.0957396 0.03888440 weaklyHypometh 0.997036 insignificant 0.1359423 0.7812500 -0.59383856 6 0.225415 0.819475 -0.5940593 1.0000e+00 1.6841e-36 hypomethylated 1.0000e+00 5.6136e-34 hypomethylated 1.0000e+00 7.5070e-10 hypomethylated 1.00000000 6.8245e-08 hypomethylated -0.5675359 1.3674e-07 hypomethylated 7.5392e-05 hypomethylated chr7 102018135 102019135 27787 ENSG00000189093 0.702476 298 8 0.5363210 232 6 0.6183920 157 6 0.639541 233 6 0.572681 104 6 0.755467 396 7 0.659893 147 6 0.630472 128 6 0.670365 173 6 0.7572841 102 6 0.812687 249 6 0.6360577 86 6 0.7114659 137 6 0.7333333 40 3 0.68154496 139 6 0.751682 58 5 0.450451 210 5 0.5963654 194 7 0.789763 257 6 0.759660 251 8 0.799490 62 4 0.718050 75 5 0.756528 156 6 0.6819728 94 5 0.672222 64 6 0.7585935 263 6 0.773311 82 5 0.7628205 43 4 0.718861 134 6 0.6098234 314 6 0.740399 254 6 0.6206326 427 6 0.3990349 196 6 0.493487 104 5 0.52993040 229 7 0.6410534 36 4 0.622269 136 6 0.5126777 268 7 0.8026958 222 6 0.6519178 320 6 0.7397766 205 6 0.665777 248 6 0.6916690 239 6 0.816838 0.7063357 0.7354623 0.7765358 0.8012872 0.813153 0.7398450 0.7351252 0.746266 0.8490170 0.823956 0.7027536 0.7864663 0.7948614 0.8141850 0.8348823 0.6591803 0.7973394 0.80760410 0.7888709 0.834758 0.8249947 0.810014 0.8677200 0.7876807 0.7804367 0.811422 0.7161376 0.812608 0.8006396 0.8041447 0.7740069 0.7017331 0.6674932 0.7196756 0.6989894 0.763885 0.7020227 0.8367990 0.8188610 0.8254228 0.8309019 0.8109763 4 0.7685881 0.7657520 -7.8812e-03 6 0.677427 0.700866 -0.02343943 8.4993e-01 3.7912e-01 insignificant 1.000000 1.0000e+00 insignificant 0.9342035 0.06345848 insignificant 1 1.00000 insignificant -0.04443008 0.1081466 insignificant 1 insignificant 0.7685881 0.6780186 0.0742433 6 0.677427 0.516495 0.1609320 7.5556e-07 9.9994e-01 weaklyHypermeth 1.3255e-05 1.0000e+00 weaklyHypermeth 2.2951e-05 1.0000e+00 weaklyHypermeth 5.1003e-04 1.0000e+00 weaklyHypermeth 0.1402199 9.1217e-03 weaklyHypermeth 1.4961e-01 insignificant 0.7685881 0.8128039 -0.03580555 6 0.677427 0.730822 -0.05339499 4.0257e-01 2.2890e-03 weaklyHypometh 1.0000e+00 1.0268e-01 insignificant 6.3449e-01 5.6436e-04 weaklyHypometh 1.0000e+00 6.2707e-02 weaklyHypometh -0.0370721 3.0730e-01 insignificant 1.000000 insignificant 0.7657520 0.6780186 0.08399761 6 0.700866 0.5164945 0.1843714 3.5034e-07 9.9999e-01 weaklyHypermeth 7.4540e-06 1.0000e+00 weaklyHypermeth 4.8140e-06 1.0000e+00 weaklyHypermeth 1.5529e-04 1.00000000 weaklyHypermeth 0.1846499 2.2059e-03 weaklyHypermeth 4.8341e-02 weaklyHypermeth 0.7657520 0.8128039 -2.1823e-02 6 0.700866 0.7308215 -0.02995556 5.3888e-01 2.3426e-02 weaklyHypometh 1.0000e+00 6.3314e-01 insignificant 3.8462e-01 1.1979e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0073580 0.82728258 insignificant 1.000000 insignificant 0.6780186 0.8128039 -0.10664617 6 0.516495 0.730822 -0.2143270 9.9752e-01 1.1702e-05 weaklyHypometh 1.0000e+00 2.7861e-04 weaklyHypometh 9.9982e-01 3.0904e-07 weaklyHypometh 1.00000000 1.7169e-05 weaklyHypometh -0.1772919 3.8537e-03 weaklyHypometh 9.2593e-02 weaklyHypometh chr7 102031435 102032435 27789 ENSG00000189093 0.933089 144 5 0.4938992 194 5 0.6357581 120 9 0.818050 143 9 0.777417 75 7 0.899242 175 5 0.698182 159 9 0.673164 149 9 0.387197 110 5 0.6505051 35 4 0.754456 251 9 0.4000000 7 0 0.7896565 82 5 0.6335609 78 5 0.82301587 63 5 0.507576 53 4 1.000000 2 0 0.8375371 174 5 0.608172 282 5 0.791358 103 5 0.883598 58 9 0.797840 32 2 0.660087 126 5 0.7405118 69 5 0.616667 52 5 0.4132790 111 5 0.719600 121 8 0.5130952 35 5 0.764078 127 5 0.8327137 136 5 0.773182 122 5 0.7930460 104 5 0.1836964 104 5 0.264971 136 5 0.16801476 145 5 0.2142857 27 1 0.370908 105 5 0.4589744 144 5 0.8306277 163 5 0.7856652 332 9 0.9074074 114 9 0.848078 91 5 0.8196869 210 9 0.879346 0.6096401 0.5972629 0.8186869 0.7384068 0.838363 0.7851237 0.5962361 0.725636 0.7752066 0.836740 0.4479056 0.7812137 0.8474928 0.8054473 0.7285354 0.8437891 0.7314230 0.75553739 0.7914789 0.874459 0.7494739 0.725817 0.5493222 0.7285354 0.7583744 0.664891 0.5213745 0.775407 0.6820141 0.7589876 0.7913706 0.3860393 0.3830896 0.3551221 0.3595924 0.341879 0.3733489 0.8992170 0.7954579 0.8396465 0.8654575 0.7690324 4 0.7298539 0.7154620 2.0060e-02 5 0.724476 0.734293 -0.00981753 5.5694e-01 4.0839e-01 insignificant 1.000000 1.0000e+00 insignificant 0.4525039 0.35567688 insignificant 1 1.00000 insignificant -0.00338292 0.9511288 insignificant 1 insignificant 0.7298875 0.2454545 0.4553519 5 0.726603 0.231939 0.4946633 7.1394e-36 1.0000e+00 hypermethylated 5.4918e-34 1.0000e+00 hypermethylated 6.6524e-09 9.9999e-01 hypermethylated 2.6610e-07 1.0000e+00 hypermethylated 0.4287835 1.1494e-05 lowCoverage 5.4734e-04 lowCoverage 0.7301387 0.8230769 -0.09348515 5 0.728063 0.827676 -0.09961276 9.9998e-01 2.6011e-03 weaklyHypometh 1.0000e+00 1.0405e-01 insignificant 9.9995e-01 9.4401e-03 weaklyHypometh 1.0000e+00 4.9685e-01 insignificant -0.1327013 5.1248e-03 weaklyHypometh 0.213535 insignificant 0.7154620 0.2458270 0.41018075 5 0.734293 0.2530248 0.4812684 6.0028e-30 9.9668e-01 hypermethylated 3.7517e-28 1.0000e+00 hypermethylated 1.6843e-08 9.9733e-01 hypermethylated 8.8645e-07 1.00000000 hypermethylated 0.4321664 1.4801e-05 lowCoverage 8.9046e-04 lowCoverage 0.7157314 0.8230769 -1.0775e-01 5 0.749321 0.8276756 -0.07835430 9.9814e-01 9.3628e-04 weaklyHypometh 1.0000e+00 7.3713e-02 weaklyHypometh 9.9912e-01 8.1765e-03 weaklyHypometh 1.0000e+00 0.628964 insignificant -0.1293184 0.01072311 weaklyHypometh 0.466003 insignificant 0.2446483 0.8230769 -0.56460186 5 0.216660 0.827676 -0.6110157 1.0000e+00 1.3956e-33 hypomethylated 1.0000e+00 3.4891e-31 hypomethylated 1.0000e+00 1.5431e-08 hypomethylated 1.00000000 1.1870e-06 hypomethylated -0.5614848 1.5901e-05 lowCoverage 2.6502e-03 lowCoverage chr7 105529135 105530135 27900 ENSG00000128536 0.723722 295 9 0.6822860 217 9 0.5928689 160 7 0.664238 202 10 0.667100 67 5 0.669782 460 10 0.567733 119 6 0.701519 200 6 0.588592 127 5 0.8151797 149 6 0.771590 237 9 0.8195489 58 4 0.8179401 195 5 NA 0 0 0.68652636 88 5 0.828571 36 4 0.800243 55 5 0.7114391 226 10 0.682482 208 9 0.702289 354 10 0.685354 57 5 0.715774 99 9 0.711972 185 10 0.7637939 87 6 0.645833 72 7 0.6879399 317 9 0.735701 120 9 0.7306397 36 2 0.692645 192 10 0.7568797 378 9 0.687363 313 10 0.6647033 504 10 0.6627091 303 9 0.597171 139 7 0.68292208 398 8 0.5933333 55 6 0.809269 72 5 0.6381830 332 9 0.7263895 320 9 0.7235903 224 9 0.7224113 194 7 0.676052 197 9 0.6339834 226 10 0.890876 0.8822268 0.8023399 0.8698456 0.8960929 0.857183 0.8209057 0.8690674 0.797070 0.8680442 0.913807 0.8580207 0.9294601 NA 0.8535766 0.8812445 0.7580690 0.8962964 0.88627460 0.9107110 0.817451 0.9209119 0.862460 0.8176541 0.8566559 0.8814984 0.895083 0.7878019 0.882018 0.8922245 0.8689228 0.8791948 0.8792370 0.8280216 0.9124475 0.8832487 0.845793 0.8851425 0.9269445 0.9129982 0.8858079 0.8740398 0.8563371 4 0.8259485 0.7961864 -3.1312e-03 9 0.687504 0.696146 -0.00864185 8.7817e-01 6.9952e-01 insignificant 1.000000 1.0000e+00 insignificant 0.8406780 0.57535432 insignificant 1 1.00000 insignificant 0.00364226 0.8650202 insignificant 1 insignificant 0.8259485 0.8398768 0.0050278 8 0.687504 0.653086 0.0344184 4.0146e-02 2.4973e-01 weaklyHypermeth 2.9304e-01 1.0000e+00 insignificant 5.4285e-01 3.9840e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0462609 2.4865e-01 insignificant 1.0000e+00 insignificant 0.8259485 0.8492679 -0.01780448 8 0.687504 0.701567 -0.01406270 9.6061e-01 1.9214e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.8983e-01 2.7448e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0137067 6.0628e-01 insignificant 1.000000 insignificant 0.7961864 0.8398768 0.00754304 8 0.696146 0.6530859 0.0430602 1.7225e-02 3.0388e-01 weaklyHypermeth 1.4354e-01 1.0000e+00 insignificant 2.8929e-01 3.8795e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0426186 2.5712e-01 insignificant 1.0000e+00 insignificant 0.7961864 0.8492679 -1.4908e-02 8 0.696146 0.7015670 -0.00542084 9.2259e-01 3.0617e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.0416e-01 3.9522e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0100645 0.64594748 insignificant 1.000000 insignificant 0.8398768 0.8492679 -0.02619335 8 0.653086 0.701567 -0.0484811 8.6840e-01 8.6947e-02 insignificant 1.0000e+00 6.0380e-01 insignificant 8.9256e-01 4.6582e-01 insignificant 1.00000000 1.0000e+00 insignificant -0.0325542 4.0808e-01 insignificant 1.0000e+00 insignificant chr7 105971535 105972535 27922 NAMPT ENSG00000105835 0.876458 195 6 0.8198529 56 3 0.6162393 60 5 0.916667 76 6 0.875817 57 3 0.779125 133 5 0.783333 50 5 0.596078 55 3 0.670696 50 3 0.7466422 46 3 0.847032 147 5 0.8611111 46 5 0.8759921 62 5 NA 0 0 0.76071429 58 5 0.811119 67 5 0.726667 28 5 0.9184464 107 6 0.834795 72 5 0.878470 116 5 0.860577 38 3 0.912963 34 3 0.853743 140 6 0.9200000 41 3 0.849603 32 4 0.8172826 92 5 0.449206 24 3 0.8666667 29 3 0.795940 51 5 0.8531884 91 5 0.674722 97 5 0.8633244 142 5 0.8373904 58 3 0.776754 70 5 0.57196970 81 5 0.6412037 44 5 0.500000 38 3 0.7854226 107 5 0.8941344 216 6 0.9282268 194 6 0.9103175 141 6 0.896828 187 6 0.9269165 151 6 0.803980 0.7204615 0.7428824 0.8448276 0.8073022 0.730826 0.7881226 0.6490872 0.708652 0.7581154 0.762493 0.7413793 0.8035714 NA 0.8011084 0.8708619 0.6310345 0.8634672 0.84754991 0.8133134 0.821411 0.8379310 0.853086 0.8758621 0.8440887 0.7666297 0.697044 0.7931034 0.867153 0.7997751 0.8228811 0.8282593 0.6972096 0.7394737 0.5822884 0.7456897 0.655172 0.7314766 0.8340739 0.8860578 0.8605911 0.8518085 0.8734260 3 0.8143147 0.8261406 -1.9294e-02 5 0.835091 0.830039 0.00505234 4.9520e-01 1.7512e-01 insignificant 1.000000 1.0000e+00 insignificant 0.8856600 0.12290188 insignificant 1 1.00000 insignificant -0.01001776 0.8196632 lowCoverage 1 lowCoverage 0.8143147 0.7110553 0.0905023 5 0.835091 0.700714 0.1343772 4.1868e-06 9.9258e-01 weaklyHypermeth 6.8637e-05 1.0000e+00 weaklyHypermeth 3.6498e-03 9.2493e-01 weaklyHypermeth 5.4197e-02 1.0000e+00 weaklyHypermeth 0.1142935 9.6660e-02 lowCoverage 9.9650e-01 lowCoverage 0.8143147 0.9111361 -0.07757014 5 0.835091 0.911289 -0.07619708 9.9972e-01 2.2844e-03 weaklyHypometh 1.0000e+00 1.0268e-01 insignificant 9.9777e-01 4.1919e-03 weaklyHypometh 1.0000e+00 2.8196e-01 insignificant -0.1115343 8.0503e-05 lowCoverage 0.020126 lowCoverage 0.8261406 0.7110553 0.11371098 5 0.830039 0.7007143 0.1293249 5.3357e-06 9.8836e-01 weaklyHypermeth 9.5280e-05 1.0000e+00 weaklyHypermeth 3.0691e-03 9.8994e-01 weaklyHypermeth 4.4479e-02 1.00000000 weaklyHypermeth 0.1243113 9.1922e-02 lowCoverage 8.8387e-01 lowCoverage 0.8261406 0.9111361 -5.8388e-02 5 0.830039 0.9112886 -0.08124942 9.9983e-01 3.2842e-03 weaklyHypometh 1.0000e+00 1.4928e-01 insignificant 9.9500e-01 9.8590e-02 insignificant 1.0000e+00 1.000000 insignificant -0.1015165 0.02106230 lowCoverage 0.679429 lowCoverage 0.7110553 0.9111361 -0.16790636 5 0.700714 0.911289 -0.2105743 9.9999e-01 5.0277e-07 weaklyHypometh 1.0000e+00 1.6759e-05 weaklyHypometh 9.9924e-01 7.6843e-04 weaklyHypometh 1.00000000 1.9211e-02 weaklyHypometh -0.2258278 8.9501e-03 lowCoverage 1.5845e-01 lowCoverage chr7 107524835 107525835 27993 ENSG00000216085 0.732816 85 5 0.5833810 121 5 0.5193452 54 5 0.774510 56 3 0.775463 25 2 0.729538 174 5 0.725000 29 5 0.582394 95 5 0.703333 41 5 0.7083333 40 4 0.706207 149 5 0.4000000 12 1 0.5800000 64 5 0.6759259 40 5 0.65833333 39 5 0.500000 7 0 0.710000 23 2 0.6442063 70 5 0.652614 96 5 0.597522 143 5 0.760417 22 2 0.448889 27 3 0.662088 51 5 0.6699811 44 4 0.742857 19 2 0.7887945 121 5 0.623117 41 2 0.5925926 21 2 0.626294 85 5 0.7980106 146 5 0.721340 121 5 0.5842344 174 5 0.6083333 39 5 0.369213 58 5 0.54933630 148 5 1.0000000 2 0 0.681863 63 5 0.5454545 67 5 0.6388889 62 5 0.6913768 85 4 0.6938690 92 6 0.560000 34 3 0.7745098 67 4 0.751087 0.7135357 0.7419643 0.8750000 0.7708333 0.727279 0.7600000 0.8046257 0.850000 0.8000000 0.768964 0.6000000 0.7250000 0.7333333 0.6850000 0.4500000 0.7400000 0.7644345 0.78100436 0.7359888 0.600000 0.6533333 0.746978 0.7860795 0.7892857 0.7734545 0.618008 0.7722727 0.744798 0.7388594 0.7873016 0.6593919 0.6583333 0.5326389 0.6610734 0.8045220 0.708603 0.6381818 0.7281250 0.7780000 0.6720833 0.6700000 0.8588235 0 0.6544387 0.6486797 2.0190e-02 5 0.699301 0.679643 0.01965853 3.6943e-01 9.7062e-01 insignificant 1.000000 1.0000e+00 insignificant 0.7232553 0.97484553 insignificant 1 1.00000 insignificant -0.02027178 0.5846203 lowCoverage 1 lowCoverage 0.6541298 0.5676393 0.0933497 5 0.736452 0.589490 0.1469616 1.5778e-04 9.9977e-01 weaklyHypermeth 1.9242e-03 1.0000e+00 weaklyHypermeth 2.8899e-02 9.9989e-01 weaklyHypermeth 3.1075e-01 1.0000e+00 insignificant 0.0222461 8.1081e-01 lowCoverage 1.0000e+00 lowCoverage 0.6541298 0.5529412 0.01998999 3 0.736452 0.743625 -0.00717296 3.4715e-01 4.8945e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 5.8803e-01 6.2944e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0237828 5.8437e-01 lowCoverage 1.000000 lowCoverage 0.6476079 0.5676393 0.07320005 5 0.675714 0.5894903 0.0862238 3.1476e-02 1.0000e+00 weaklyHypermeth 2.4027e-01 1.0000e+00 insignificant 1.6303e-01 1.0000e+00 insignificant 1.0000e+00 1.00000000 insignificant 0.0425179 6.5561e-01 lowCoverage 1.0000e+00 lowCoverage 0.6476079 0.5529412 4.6295e-03 3 0.675714 0.7436249 -0.06791076 5.7419e-01 3.6438e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.2085e-01 7.1634e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage -0.0035110 0.94057139 lowCoverage 1.000000 lowCoverage 0.5676393 0.5529412 -0.06494777 3 0.589490 0.743625 -0.1541346 9.8622e-01 1.9114e-02 lowCoverage 1.0000e+00 1.6478e-01 lowCoverage 9.9683e-01 1.1564e-01 lowCoverage 1.00000000 8.5658e-01 lowCoverage -0.0460289 6.3647e-01 lowCoverage 1.0000e+00 lowCoverage chr7 110958335 110959335 28043 IMMP2L ENSG00000184903 0.78057 258 7 0.742583 174 6 0.66539 101 7 0.810745 130 7 0.7456710 56 7 0.817265 245 7 0.721393 98 7 0.767208 109 6 0.730636 91 7 0.705586 82 6 0.610885 221 7 0.7784993 42 5 0.784226 115 7 0.666667 21 3 0.756800 100 7 0.6078077 78 5 0.599206 42 4 0.823742 175 7 0.8032459 130 7 0.791367 245 7 0.819048 39 5 0.7346245 57 4 0.647664 121 7 0.763348 60 5 0.790249 80 7 0.665441 217 7 0.868214 82 6 0.571023 43 3 0.8446712 114 6 0.744337 211 7 0.809823 179 5 0.831117 319 7 0.7361794 110 5 0.689859 96 7 0.848522 141 7 0.8615385 43 4 0.795816 86 5 0.693986 192 7 0.783455 214 7 0.781504 229 7 0.772873 172 7 0.812627 153 7 0.800934 202 7 0.781585 0.746662 0.650410 0.824784 0.7598980 0.809193 0.754524 0.7596505 0.7249411 0.698009 0.799314 0.754093 0.796447 0.85899 0.743619 0.6504606 0.630235 0.838124 0.823819 0.808243 0.827806 0.7163702 0.74888 0.805661 0.786033 0.782949 0.825501 0.703632 0.833214 0.775684 0.804584 0.798641 0.6860860 0.673097 0.807676 0.7668019 0.784768 0.722569 0.789359 0.766981 0.794391 0.826197 0.820764 3 0.777557 0.791064 -2.7886e-02 7 0.617108 0.668444 -0.0513361 0.98944328 0.1392946 insignificant 1.00000 1.00000 insignificant 0.9894406 0.34549232 insignificant 1 1.00000 insignificant -0.0219888 0.479202 insignificant 1 insignificant 0.778486 0.742515 0.0135270 7 0.771385 0.793153 -0.0217676 1.6178e-02 9.1564e-02 weaklyHypermeth 1.9032e-01 1.0000e+00 insignificant 1.0613e-01 5.0066e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03550874 3.3700e-01 insignificant 1.0000e+00 insignificant 0.778266 0.831959 -0.0265377 7 0.759134 0.787630 -0.0284960 9.4708e-01 9.3700e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9193e-01 4.7680e-02 weaklyHypometh 1.000000 1.0000e+00 insignificant -0.0548040 4.7232e-03 weaklyHypometh 0.2624015 insignificant 0.792490 0.742515 0.0438037 7 0.793888 0.793153 0.00073576 1.0015e-02 4.4961e-01 weaklyHypermeth 1.2066e-01 1.0000e+00 insignificant 6.8909e-02 4.1469e-01 insignificant 8.6136e-01 1.0000e+00 insignificant -0.0135200 7.4320e-01 insignificant 1.0000e+00 insignificant 0.792440 0.831959 0.00415941 7 0.793015 0.787630 0.0053854 4.8361e-01 4.1536e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.2260e-01 5.3528e-01 insignificant 1.0000000 1.00000000 insignificant -0.0328153 2.4553e-01 insignificant 1.000000 insignificant 0.742129 0.831959 -0.0373457 7 0.763603 0.787630 -0.0240269 5.4783e-01 7.9817e-02 insignificant 1.0000e+00 8.1445e-01 insignificant 4.4239e-01 1.3230e-01 insignificant 1.000000 1.0000e+00 insignificant -0.0192953 5.6660e-01 insignificant 1.00000000 insignificant chr7 111913235 111914235 28059 C7orf53 ENSG00000181016 0.61326 218 8 0.541706 121 7 0.60833 37 7 0.700612 185 8 0.7080087 93 7 0.713408 113 8 0.787872 66 6 0.689474 107 7 0.562222 71 7 0.485714 52 7 0.565789 179 7 0.6516667 28 1 0.661726 108 7 0.616533 92 7 0.673095 69 6 0.6428571 40 3 0.597577 234 4 0.618519 222 7 0.5648148 71 7 0.540326 101 8 0.774074 28 3 0.4285714 7 0 0.441275 98 4 0.523677 61 8 0.604748 98 7 0.510073 121 8 0.597197 74 7 0.564583 30 2 0.6096703 97 7 0.687535 125 8 0.627728 128 8 0.691860 112 8 0.7389076 123 7 0.500000 63 7 0.603535 119 8 0.7777778 20 2 0.682251 68 7 0.654881 101 8 0.592308 152 8 0.637634 145 8 0.660383 177 8 0.670657 178 4 0.548477 151 8 0.751087 0.540566 0.628889 0.739517 0.7436688 0.805929 0.842842 0.7424123 0.5410185 0.630952 0.677295 0.549306 0.718203 0.71184 0.719226 0.7125000 0.701535 0.649320 0.694213 0.673247 0.794444 0.3833333 0.64540 0.724742 0.684112 0.627598 0.739792 0.649306 0.666769 0.733221 0.711003 0.691461 0.7257666 0.562821 0.678346 0.7417660 0.587297 0.726835 0.698825 0.690154 0.744657 0.752040 0.714198 1 0.644152 0.638407 -6.0491e-03 8 0.549889 0.555451 -0.0055619 0.65799769 0.5768964 insignificant 1.00000 1.00000 insignificant 0.6502494 0.82592482 insignificant 1 1.00000 insignificant 0.0387598 0.266542 insignificant 1 insignificant 0.644444 0.637652 0.0033733 7 0.599879 0.656912 -0.0570325 1.6777e-01 3.1631e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.5302e-01 5.3928e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03238301 4.8429e-01 insignificant 1.0000e+00 insignificant 0.644444 0.666252 -0.0201512 8 0.599879 0.608179 -0.0083002 6.8434e-01 3.3737e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.7513e-01 4.4311e-01 insignificant 1.000000 1.0000e+00 insignificant 0.0052838 8.5482e-01 insignificant 1.0000000 insignificant 0.639059 0.637652 0.0051966 7 0.605947 0.656912 -0.05096495 2.6817e-01 3.6757e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.0646e-01 4.1595e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0711429 1.8582e-01 insignificant 1.0000e+00 insignificant 0.639059 0.666252 -0.01353385 8 0.605947 0.608179 -0.0022326 5.8872e-01 4.9884e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.3813e-01 4.3074e-01 insignificant 1.0000000 1.00000000 insignificant -0.0334760 3.8474e-01 insignificant 1.000000 insignificant 0.637652 0.666252 -0.0279728 7 0.656912 0.608179 0.0487323 3.9780e-01 6.4416e-02 insignificant 1.0000e+00 6.7806e-01 insignificant 8.0059e-01 3.0669e-01 insignificant 1.000000 1.0000e+00 insignificant 0.0376668 4.4258e-01 insignificant 1.00000000 insignificant chr7 111913435 111914435 28060 C7orf53 ENSG00000181016 0.61326 218 8 0.541706 121 7 0.60833 37 7 0.700612 185 8 0.7080087 93 7 0.745252 115 8 0.787872 66 6 0.689474 107 7 0.562222 71 7 0.485714 52 7 0.565789 179 7 0.6516667 28 1 0.661726 108 7 0.616533 92 7 0.673095 69 6 0.6428571 40 3 0.597577 234 4 0.618519 222 7 0.5648148 71 7 0.540326 101 8 0.774074 28 3 0.4285714 7 0 0.441275 98 4 0.523677 61 8 0.604748 98 7 0.510073 121 8 0.597197 74 7 0.564583 30 2 0.6096703 97 7 0.687535 125 8 0.661571 129 8 0.691860 112 8 0.7389076 123 7 0.500000 63 7 0.603535 119 8 0.7777778 20 2 0.682251 68 7 0.655952 104 8 0.542949 153 8 0.673871 146 8 0.660383 177 8 0.670657 178 4 0.560296 154 8 0.751087 0.540566 0.628889 0.739517 0.7436688 0.805929 0.842842 0.7424123 0.5410185 0.630952 0.677295 0.549306 0.718203 0.71184 0.719226 0.7125000 0.701535 0.649320 0.694213 0.673247 0.794444 0.3833333 0.64540 0.724742 0.684112 0.627598 0.739792 0.649306 0.666769 0.733221 0.711003 0.691461 0.7257666 0.562821 0.678346 0.7417660 0.587297 0.726835 0.698825 0.690154 0.744657 0.752040 0.714198 1 0.644475 0.638776 -6.0429e-03 8 0.584513 0.589647 -0.0051341 0.75869580 0.6865219 insignificant 1.00000 1.00000 insignificant 0.7520006 0.89273101 insignificant 1 1.00000 insignificant 0.0375318 0.290346 insignificant 1 insignificant 0.644767 0.637827 0.0037753 7 0.633223 0.657725 -0.0245020 2.4992e-01 4.2745e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.9036e-01 6.5629e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03096940 5.0428e-01 insignificant 1.0000e+00 insignificant 0.644767 0.665842 -0.0197531 8 0.633223 0.607498 0.0257248 6.2540e-01 4.2025e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.5044e-01 5.5261e-01 insignificant 1.000000 1.0000e+00 insignificant 0.0071367 8.3672e-01 insignificant 1.0000000 insignificant 0.639428 0.637827 0.0055468 7 0.638784 0.657725 -0.01894009 3.7251e-01 4.8361e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.4243e-01 5.3458e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0685012 2.0320e-01 insignificant 1.0000e+00 insignificant 0.639428 0.665842 -0.01310344 8 0.638784 0.607498 0.0312868 5.3324e-01 5.8512e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.1482e-01 5.4005e-01 insignificant 1.0000000 1.00000000 insignificant -0.0303951 4.7897e-01 insignificant 1.000000 insignificant 0.637827 0.665842 -0.0273730 7 0.657725 0.607498 0.0502269 4.2385e-01 8.4398e-02 insignificant 1.0000e+00 8.5250e-01 insignificant 8.4566e-01 3.7542e-01 insignificant 1.000000 1.0000e+00 insignificant 0.0381061 4.6432e-01 insignificant 1.00000000 insignificant chr7 115869835 115870835 28155 ENSG00000216076 0.79663 336 7 0.602813 280 7 0.75531 158 7 0.841942 225 7 0.8197875 183 4 0.745701 289 7 0.596389 229 7 0.800896 230 7 0.720591 180 7 0.721950 169 7 0.861852 244 7 0.6716068 102 4 0.727553 249 4 0.866667 23 3 0.831885 144 6 0.5785714 76 2 0.778345 82 2 0.828863 250 7 0.7189267 202 7 0.768942 208 7 0.685078 66 2 0.7262443 66 2 0.773448 183 7 0.793269 106 5 0.782251 41 5 0.857241 409 7 0.776984 100 5 0.689850 56 2 0.8433049 266 7 0.778547 398 7 0.651718 309 7 0.573374 316 7 0.8588752 229 6 0.767526 209 7 0.740144 170 7 0.9099265 33 2 0.719458 204 7 0.865192 442 7 0.868721 359 7 0.587970 357 7 0.832824 328 7 0.752235 269 7 0.742440 386 7 0.804566 0.773045 0.705472 0.897641 0.8431015 0.787100 0.495792 0.8655740 0.6789901 0.736316 0.834743 0.529942 0.867045 0.91214 0.814022 0.5662606 0.463729 0.897167 0.841237 0.878207 0.764356 0.8044235 0.81694 0.858580 0.873221 0.911698 0.846575 0.893119 0.856936 0.925117 0.902443 0.242802 0.8537709 0.836797 0.732659 0.8712563 0.807476 0.894750 0.949588 0.884491 0.840959 0.916871 0.941113 2 0.775330 0.785406 -9.6776e-03 7 0.694867 0.619076 0.0757912 0.99876158 0.9002713 insignificant 1.00000 1.00000 insignificant 0.9984578 0.71720902 insignificant 1 1.00000 insignificant 0.0074851 0.808710 insignificant 1 insignificant 0.775531 0.845377 -0.0717241 7 0.752773 0.793781 -0.0410081 9.9791e-01 4.6828e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9684e-01 1.6097e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.05842628 1.5054e-01 insignificant 1.0000e+00 insignificant 0.775214 0.904650 -0.1291402 7 0.669440 0.612041 0.0573984 9.9909e-01 1.6892e-04 weaklyHypometh 1.0000e+00 1.8769e-02 weaklyHypometh 9.9712e-01 1.6813e-03 weaklyHypometh 1.000000 1.5284e-01 insignificant -0.0050774 9.2607e-01 insignificant 1.0000000 insignificant 0.785745 0.845377 -0.0608580 7 0.670666 0.793781 -0.12311524 9.3988e-01 6.5151e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.2542e-01 8.7032e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0659114 1.2557e-01 insignificant 1.0000e+00 insignificant 0.785220 0.904650 -0.11655231 7 0.587332 0.612041 -0.0247088 9.9465e-01 1.8220e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9797e-01 2.8885e-01 insignificant 1.0000000 1.00000000 insignificant -0.0125625 8.2367e-01 insignificant 1.000000 insignificant 0.845136 0.904594 -0.0554834 7 0.775034 0.576772 0.1982616 9.9997e-01 5.8740e-02 insignificant 1.0000e+00 6.2489e-01 insignificant 9.8392e-01 1.6121e-01 insignificant 1.000000 1.0000e+00 insignificant 0.0533489 3.8762e-01 insignificant 1.00000000 insignificant chr7 116139735 116140735 28179 MET ENSG00000105976 0.92816 422 14 0.896805 132 9 0.66533 143 10 0.896225 321 14 0.7757576 50 5 0.874472 472 14 0.800952 76 7 0.851809 127 9 0.850904 78 6 0.856895 118 10 0.835269 239 15 0.7920635 56 3 0.762380 103 8 NA 0 0 0.846107 109 10 0.8615385 59 4 0.613810 73 6 0.857420 386 14 0.9025298 204 14 0.830523 381 15 0.801046 69 6 0.7311056 111 10 0.811484 284 15 0.761216 78 9 0.839938 111 9 0.809436 267 13 0.746259 114 9 0.751587 56 5 0.9185505 122 9 0.876951 263 13 0.805575 214 13 0.757789 442 14 0.7426076 142 10 0.764685 123 9 0.825775 271 15 0.9329527 91 8 0.697590 90 8 0.766874 248 14 0.932497 363 14 0.909663 438 14 0.890171 366 14 0.906118 287 14 0.907677 397 14 0.929666 0.911740 0.809131 0.923734 0.7973842 0.853398 0.816720 0.9130232 0.9168394 0.862937 0.914946 0.834081 0.939489 NA 0.868839 0.9931011 0.729127 0.905557 0.928346 0.882334 0.804185 0.8448939 0.92907 0.800240 0.857749 0.872703 0.870489 0.902093 0.885622 0.892196 0.860079 0.846658 0.8688270 0.762135 0.805681 0.9038504 0.829365 0.832833 0.945820 0.917356 0.918815 0.928587 0.929372 3 0.881375 0.843266 2.9527e-02 13 0.861279 0.773776 0.0875026 0.00576329 0.9956417 weaklyHypermeth 1.00000 1.00000 insignificant 0.1295641 0.98045976 insignificant 1 1.00000 insignificant 0.0253492 0.307655 insignificant 1 insignificant 0.881375 0.830052 0.0516128 13 0.861279 0.798320 0.0629588 5.7802e-04 9.7494e-01 weaklyHypermeth 9.0316e-03 1.0000e+00 weaklyHypermeth 1.4754e-02 9.4647e-01 weaklyHypermeth 2.4590e-01 1.0000e+00 insignificant 0.03784676 3.4906e-01 insignificant 1.0000e+00 insignificant 0.881523 0.927066 -0.0372718 14 0.868697 0.908038 -0.0393409 9.9970e-01 9.6530e-03 weaklyHypometh 1.0000e+00 5.0805e-01 insignificant 9.9996e-01 9.8480e-03 weaklyHypometh 1.000000 6.5653e-01 insignificant -0.0829642 3.1785e-04 weaklyHypometh 0.0635698 weaklyHypometh 0.843266 0.830052 0.0228572 13 0.773776 0.798320 -0.02454387 9.2922e-02 4.5154e-01 insignificant 8.9348e-01 1.0000e+00 insignificant 1.0410e-01 7.3808e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0124975 7.4651e-01 insignificant 1.0000e+00 insignificant 0.844058 0.927066 -0.06762276 13 0.825361 0.908038 -0.0826770 1.0000e+00 5.0322e-06 weaklyHypometh 1.0000e+00 1.2581e-03 weaklyHypometh 1.0000e+00 2.6472e-04 weaklyHypometh 1.0000000 0.06618031 weaklyHypometh -0.1083135 2.5964e-05 weaklyHypometh 0.012982 weaklyHypometh 0.830737 0.927066 -0.0889453 13 0.818208 0.908038 -0.0898302 9.9998e-01 2.9655e-06 weaklyHypometh 1.0000e+00 1.0983e-04 weaklyHypometh 9.9996e-01 9.0726e-05 weaklyHypometh 1.000000 5.3368e-03 weaklyHypometh -0.1208110 1.4619e-02 weaklyHypometh 0.33225598 insignificant chr7 116230735 116231735 28183 MET ENSG00000105976 0.70543 120 6 0.715664 107 6 0.57879 58 6 0.612573 75 6 0.6104497 56 7 0.619080 113 6 0.600446 81 8 0.592424 63 6 0.542857 49 5 0.737351 41 4 0.753852 165 6 0.7244898 30 3 0.738681 110 8 0.750000 56 6 0.802778 51 7 0.3875000 30 3 0.625000 7 0 0.706890 128 6 0.6250000 47 3 0.585714 67 6 0.690476 32 3 0.3333333 6 0 0.731685 52 3 0.670975 50 6 0.518403 80 6 0.651738 98 6 0.642845 55 6 0.460714 43 6 0.6944444 69 6 0.666270 156 6 0.685934 105 6 0.551465 84 6 0.5034666 100 6 0.525000 74 6 0.640774 109 6 0.5416667 16 0 0.634375 71 6 0.578838 106 6 0.620127 87 6 0.758109 118 6 0.730612 87 6 0.610376 81 8 0.710227 70 6 0.639862 0.631542 0.592126 0.603189 0.6024505 0.559669 0.616628 0.5577306 0.5928998 0.794317 0.707980 0.684046 0.640645 0.66910 0.760746 0.4671533 0.574722 0.600562 0.630170 0.598332 0.574209 0.4675162 0.66596 0.568752 0.513534 0.674207 0.610060 0.610010 0.664234 0.659999 0.659302 0.638228 0.5811770 0.515845 0.640759 0.7420925 0.581536 0.571499 0.628461 0.659074 0.669447 0.577763 0.678832 3 0.629986 0.645783 -6.4618e-03 6 0.682426 0.669573 0.0128528 0.65949071 0.4456108 insignificant 1.00000 1.00000 insignificant 0.4116785 0.58332997 insignificant 1 1.00000 insignificant 0.0425583 0.305241 insignificant 1 insignificant 0.629477 0.584034 0.0467062 6 0.642729 0.504270 0.1384591 1.4947e-05 9.5625e-01 weaklyHypermeth 2.9308e-04 1.0000e+00 weaklyHypermeth 1.0408e-02 7.9026e-01 weaklyHypermeth 1.8586e-01 1.0000e+00 insignificant 0.08006198 2.4418e-02 weaklyHypermeth 4.6958e-01 insignificant 0.629477 0.654628 -0.0236415 6 0.642729 0.674769 -0.0320399 9.6804e-01 7.0956e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8343e-01 8.3646e-02 insignificant 1.000000 1.0000e+00 insignificant -0.0351416 3.6551e-01 insignificant 1.0000000 insignificant 0.645356 0.584034 0.0624580 6 0.628269 0.504270 0.12399969 1.9780e-04 8.8995e-01 weaklyHypermeth 3.4103e-03 1.0000e+00 weaklyHypermeth 1.1793e-02 3.7284e-01 weaklyHypermeth 1.9020e-01 1.0000e+00 insignificant 0.0375037 3.7923e-01 insignificant 1.0000e+00 insignificant 0.645356 0.654628 -0.01483120 6 0.628269 0.674769 -0.0464993 8.7233e-01 2.6845e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7188e-01 1.2100e-01 insignificant 1.0000000 1.00000000 insignificant -0.0776999 1.1054e-01 insignificant 1.000000 insignificant 0.584034 0.654628 -0.0728502 6 0.504270 0.674769 -0.1704990 9.1015e-01 6.8265e-05 weaklyHypometh 1.0000e+00 1.5876e-03 weaklyHypometh 8.8431e-01 5.4746e-03 weaklyHypometh 1.000000 1.0330e-01 insignificant -0.1152036 1.6162e-02 weaklyHypometh 0.34350281 insignificant chr7 116356535 116357535 28188 ENSG00000208645 0.52992 182 5 0.509747 204 6 0.34897 138 5 0.641418 115 5 0.4607756 180 6 0.631359 182 5 0.537794 219 6 0.533422 161 6 0.466383 174 6 0.569946 158 6 0.518573 211 6 0.4879012 134 6 0.477455 235 6 0.596566 155 5 0.489496 221 6 0.5130952 118 6 0.494508 104 6 0.610194 115 6 0.5015480 104 6 0.525984 114 5 0.563034 67 5 0.5195960 50 5 0.494887 152 5 0.526667 56 5 0.803152 74 5 0.516862 174 6 0.588790 75 5 0.492040 87 5 0.4771898 134 6 0.533425 208 6 0.523823 170 6 0.521894 214 5 0.4822820 228 6 0.478536 137 6 0.414321 147 6 0.6777778 28 3 0.450507 134 6 0.444040 115 6 0.656969 170 5 0.667949 136 5 0.694832 122 5 0.727504 128 5 0.734081 121 5 0.639491 0.604505 0.426014 0.645416 0.5522340 0.635647 0.623117 0.6153067 0.5382007 0.672125 0.619186 0.595894 0.574816 0.59763 0.590702 0.6165883 0.586224 0.700588 0.605243 0.633527 0.678285 0.5283659 0.59234 0.533114 0.756331 0.576508 0.657640 0.591767 0.576863 0.634020 0.580087 0.633509 0.5781751 0.568911 0.508004 0.6896930 0.542959 0.548719 0.656791 0.669345 0.703487 0.674115 0.686686 5 0.553350 0.559206 3.4805e-04 5 0.510750 0.521989 -0.0112390 0.47624026 0.1036112 insignificant 1.00000 1.00000 insignificant 0.4867582 0.11395948 insignificant 1 1.00000 insignificant -0.0245274 0.408379 insignificant 1 insignificant 0.553350 0.500634 0.0502442 6 0.510750 0.457282 0.0534679 4.2836e-03 9.9886e-01 weaklyHypermeth 5.7219e-02 1.0000e+00 weaklyHypermeth 1.1251e-01 9.4904e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03100847 4.8028e-01 insignificant 1.0000e+00 insignificant 0.553350 0.692762 -0.0791983 5 0.510750 0.700717 -0.1899674 9.9978e-01 8.0533e-12 weaklyHypometh 1.0000e+00 8.0533e-09 weaklyHypometh 9.9946e-01 2.1065e-04 weaklyHypometh 1.000000 3.0092e-02 weaklyHypometh -0.1740145 2.2857e-06 weaklyHypometh 0.0012989 weaklyHypometh 0.559206 0.500634 0.0499958 5 0.521989 0.457282 0.06470690 6.0740e-04 9.3042e-01 weaklyHypermeth 9.6491e-03 1.0000e+00 weaklyHypermeth 4.9023e-02 8.0148e-01 weaklyHypermeth 6.3666e-01 1.0000e+00 insignificant 0.0555359 2.5692e-01 insignificant 1.0000e+00 insignificant 0.559206 0.692762 -0.07797518 5 0.521989 0.700717 -0.1787284 9.4032e-01 1.7539e-05 weaklyHypometh 1.0000e+00 3.5079e-03 weaklyHypometh 9.3006e-01 7.9246e-03 weaklyHypometh 1.0000000 1.00000000 insignificant -0.1494871 1.2866e-04 weaklyHypometh 0.042887 weaklyHypometh 0.500634 0.692762 -0.1311234 5 0.457282 0.700717 -0.2434353 9.9997e-01 2.4038e-07 weaklyHypometh 1.0000e+00 1.0927e-05 weaklyHypometh 9.9998e-01 4.2305e-04 weaklyHypometh 1.000000 1.7627e-02 weaklyHypometh -0.2050229 2.0952e-03 weaklyHypometh 0.08730197 weaklyHypometh chr7 127593135 127594135 28346 MIR593 ENSG00000207588 0.11913 804 16 0.038781 570 18 0.14562 597 18 0.069331 646 15 0.0065302 385 16 0.054396 1036 17 0.014383 503 16 0.103549 630 16 0.011132 620 16 0.026083 579 16 0.013051 592 16 0.0085015 406 16 0.063985 436 16 0.025488 336 15 0.012848 598 16 0.0048077 479 16 0.014259 149 8 0.013504 1090 16 0.0140034 395 16 0.084534 743 17 0.028845 361 16 0.0041713 269 8 0.066262 463 18 0.016465 260 17 0.079333 401 15 0.029434 886 18 0.012451 605 16 0.032467 472 16 0.0107879 444 16 0.027832 805 18 0.034388 753 18 0.062447 723 17 0.0499974 540 18 0.079018 358 16 0.050375 604 17 0.0104167 143 16 0.011155 366 16 0.051012 657 18 0.015371 747 16 0.055106 716 16 0.081322 579 16 0.022017 576 16 0.016494 540 16 0.027728 0.031336 0.071545 0.021180 0.0073838 0.032130 0.011688 0.0099458 0.0097929 0.022358 0.011350 0.010716 0.012832 0.02955 0.015857 0.0052373 0.015940 0.014384 0.013189 0.027355 0.030645 0.0044447 0.07004 0.019187 0.018634 0.021587 0.018206 0.035570 0.009318 0.024386 0.023153 0.029547 0.0283056 0.076865 0.066772 0.0035461 0.013564 0.043596 0.017787 0.011673 0.013221 0.028337 0.022876 15 0.025714 0.034783 -4.4974e-03 16 0.081543 0.030306 0.0512368 0.75391318 0.7727899 insignificant 1.00000 1.00000 insignificant 0.7810012 0.74366426 insignificant 1 1.00000 insignificant 0.0084558 0.473539 insignificant 1 insignificant 0.025397 0.039355 -0.0142348 16 0.062236 0.038014 0.0242215 8.8395e-01 1.8880e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 8.8630e-01 3.0240e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00020022 9.8909e-01 insignificant 1.0000e+00 insignificant 0.025882 0.017733 0.0039295 16 0.114217 0.057643 0.0565743 3.1348e-01 5.9437e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.8056e-01 7.3387e-01 insignificant 1.000000 1.0000e+00 insignificant 0.0041342 8.0310e-01 insignificant 1.0000000 insignificant 0.034703 0.039355 -0.0107910 18 0.033381 0.038014 -0.00463263 9.9086e-01 2.5493e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8656e-01 5.7704e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0082555 5.3593e-01 insignificant 1.0000e+00 insignificant 0.034815 0.017778 0.00835533 16 0.033803 0.062077 -0.0282739 2.9694e-01 9.3742e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.2209e-01 9.3061e-01 insignificant 1.0000000 1.00000000 insignificant -0.0043216 7.7856e-01 insignificant 1.000000 insignificant 0.039414 0.017538 0.0202907 16 0.039742 0.027909 0.0118327 2.3706e-01 9.7603e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.1240e-01 9.8198e-01 insignificant 1.000000 1.0000e+00 insignificant 0.0039339 8.2225e-01 insignificant 1.00000000 insignificant chr7 129195435 129196435 28379 ENSG00000212238 0.84856 289 8 0.687371 196 9 0.59529 112 8 0.800499 153 5 0.8055556 87 8 0.830137 306 8 0.836002 113 8 0.817076 128 8 0.863086 122 8 0.837738 77 7 0.840387 319 9 0.7592593 53 4 0.683334 175 8 0.855556 55 3 0.838928 125 8 0.8601190 64 7 0.796886 44 3 0.797341 296 8 0.8828621 129 8 0.869176 192 8 0.810167 135 8 0.8077778 40 5 0.846968 129 8 0.734999 221 6 0.868588 164 4 0.869517 154 8 0.707992 168 8 0.675000 82 8 0.8917790 158 8 0.828375 237 8 0.802747 198 8 0.846377 236 8 0.6569935 145 8 0.598419 114 7 0.822395 153 7 0.6872314 161 6 0.488355 174 8 0.687019 144 8 0.881373 166 7 0.734453 207 8 0.780131 184 8 0.884367 213 7 0.808625 144 7 0.849404 0.766848 0.669993 0.753372 0.7993295 0.812197 0.816024 0.8637866 0.8641563 0.805237 0.844325 0.873290 0.825903 0.84965 0.827312 0.8308116 0.760432 0.814324 0.789659 0.809455 0.771878 0.8595135 0.79706 0.885624 0.891077 0.812927 0.891641 0.799701 0.893980 0.807184 0.838221 0.871170 0.7426037 0.646647 0.879851 0.7616861 0.758269 0.733860 0.815393 0.781418 0.799084 0.824599 0.805004 3 0.816529 0.861082 -3.3016e-02 8 0.843155 0.700945 0.1422100 0.98666775 0.4083866 insignificant 1.00000 1.00000 insignificant 0.9437067 0.54862427 insignificant 1 1.00000 insignificant -0.0022661 0.929998 insignificant 1 insignificant 0.816111 0.728395 0.0917412 8 0.821094 0.524316 0.2967782 8.2503e-04 9.5799e-01 weaklyHypermeth 1.2501e-02 1.0000e+00 weaklyHypermeth 4.1205e-02 9.8086e-01 weaklyHypermeth 5.5817e-01 1.0000e+00 insignificant 0.14852258 1.9658e-02 weaklyHypermeth 4.1825e-01 insignificant 0.816408 0.783370 0.0200677 7 0.817015 0.760293 0.0567214 5.3811e-01 6.7837e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.0072e-01 5.3542e-01 insignificant 1.000000 1.0000e+00 insignificant -0.0125318 7.1859e-01 insignificant 1.0000000 insignificant 0.861530 0.730552 0.1204784 8 0.754864 0.606851 0.14801360 6.2659e-04 9.8703e-01 weaklyHypermeth 9.7905e-03 1.0000e+00 weaklyHypermeth 3.1509e-02 9.8973e-01 weaklyHypermeth 4.3762e-01 1.0000e+00 insignificant 0.1507886 1.8322e-02 weaklyHypermeth 3.8983e-01 insignificant 0.862357 0.784228 0.05208329 7 0.801203 0.829411 -0.0282076 1.1784e-01 8.3341e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.6497e-01 7.7990e-01 insignificant 1.0000000 1.00000000 insignificant -0.0102657 7.7747e-01 insignificant 1.000000 insignificant 0.732203 0.784228 -0.0514218 7 0.717187 0.829411 -0.1122237 9.6076e-01 5.6651e-02 insignificant 1.0000e+00 6.1577e-01 insignificant 9.4995e-01 7.1531e-02 insignificant 1.000000 8.8309e-01 insignificant -0.1610543 1.6488e-02 weaklyHypometh 0.34350281 insignificant chr7 129406135 129407135 28405 ENSG00000207184 0.76939 301 10 0.714434 185 8 0.68177 157 7 0.769539 249 7 0.8482953 97 8 0.658030 336 7 0.770676 131 7 0.822848 162 7 0.730098 109 7 0.785728 114 8 0.669484 282 8 0.8345960 79 6 0.802843 174 8 0.936434 73 6 0.688374 116 7 0.6271825 41 3 0.604880 69 6 0.767040 277 9 0.6770326 165 7 0.736736 284 7 0.670608 74 3 0.8582958 80 6 0.790422 208 6 0.759937 112 7 0.456044 69 4 0.748547 276 8 0.663022 101 6 0.854949 70 6 0.7891571 156 8 0.911228 259 9 0.856018 268 9 0.777673 366 7 0.6805927 205 8 0.614569 101 7 0.720736 115 6 0.7833333 29 2 0.732351 117 6 0.681707 239 9 0.670932 240 8 0.743776 267 6 0.835468 267 9 0.804782 264 8 0.744809 246 9 0.909108 0.771491 0.822802 0.874044 0.8812365 0.856604 0.846336 0.8487670 0.8025482 0.920075 0.872490 0.900538 0.906000 0.92713 0.875623 0.8499094 0.814904 0.890881 0.861653 0.867354 0.785456 0.8217754 0.84021 0.872553 0.873887 0.857276 0.822071 0.845605 0.867931 0.914143 0.864327 0.864111 0.8002875 0.580575 0.874501 0.8931707 0.804201 0.850969 0.905408 0.896311 0.900991 0.895020 0.909169 2 0.834460 0.845513 7.1004e-04 8 0.716319 0.757526 -0.0412069 0.86258610 0.0821503 insignificant 1.00000 1.00000 insignificant 0.8199646 0.62801958 insignificant 1 1.00000 insignificant -0.0165545 0.681413 insignificant 1 insignificant 0.834460 0.777916 0.0678229 7 0.716319 0.714264 0.0020552 2.9640e-02 9.1574e-01 weaklyHypermeth 3.2572e-01 1.0000e+00 insignificant 1.2497e-01 9.8644e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.04255580 1.7831e-01 insignificant 1.0000e+00 insignificant 0.837396 0.869938 -0.0365889 8 0.734028 0.796306 -0.0622782 9.7808e-01 4.3791e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.3404e-01 3.1294e-01 insignificant 1.000000 1.0000e+00 insignificant -0.0151829 6.6586e-01 insignificant 1.0000000 insignificant 0.845513 0.777916 0.0673872 7 0.757526 0.714264 0.04326212 4.2122e-02 9.9782e-01 weaklyHypermeth 4.4810e-01 1.0000e+00 insignificant 5.1053e-01 9.9926e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0591103 1.8026e-01 insignificant 1.0000e+00 insignificant 0.846647 0.869938 -0.03847099 8 0.770666 0.796306 -0.0256403 9.4713e-01 1.0031e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7367e-01 2.1978e-01 insignificant 1.0000000 1.00000000 insignificant 0.0013717 9.7620e-01 insignificant 1.000000 insignificant 0.779449 0.869938 -0.1107685 7 0.723785 0.796306 -0.0725215 1.0000e+00 1.3037e-02 weaklyHypometh 1.0000e+00 1.7617e-01 insignificant 1.0000e+00 3.1769e-01 insignificant 1.000000 1.0000e+00 insignificant -0.0577387 1.5407e-01 insignificant 1.00000000 insignificant chr7 129486835 129487835 28410 ZC3HC1 ENSG00000091732 0.75454 156 5 0.699349 128 5 0.50874 95 5 0.806493 120 5 0.6561404 42 3 0.789487 229 5 0.672973 76 3 0.630463 115 5 0.712980 65 5 0.689583 65 3 0.615012 143 5 0.5584615 35 2 0.817235 127 5 0.800000 15 2 0.796429 61 4 0.6388889 28 2 0.458333 25 3 0.714271 112 5 0.7617485 117 4 0.774519 201 5 1.000000 23 2 0.9880952 36 3 0.729953 103 5 0.853526 39 4 0.954545 17 1 0.687346 182 5 0.746429 29 2 0.708333 29 2 0.7966667 129 5 0.840214 211 5 0.696606 197 5 0.833530 216 5 0.7172663 113 5 0.528829 107 5 0.561803 85 4 0.7600000 25 2 0.813333 53 4 0.720609 219 5 0.771889 122 5 0.859639 152 4 0.853457 118 4 0.893270 145 4 0.905115 148 5 0.829442 0.783361 0.747243 0.907138 0.7892182 0.867220 0.807846 0.8416643 0.7732950 0.829328 0.843619 0.780284 0.916097 0.88889 0.908460 0.6874326 0.680831 0.822718 0.871294 0.836608 1.000000 0.9501997 0.82868 0.867625 0.870723 0.887366 0.854716 0.845065 0.884720 0.900934 0.888996 0.856601 0.8358523 0.669300 0.770234 0.8087379 0.835275 0.813693 0.859479 0.912838 0.925055 0.922416 0.949110 1 0.785678 0.838150 -4.6221e-02 5 0.596232 0.770875 -0.1746425 0.99983030 0.0018575 weaklyHypometh 1.00000 0.37150 insignificant 0.9999900 0.00046105 weaklyHypometh 1 0.23052 insignificant -0.1268211 0.004311 lowCoverage 1 lowCoverage 0.786776 0.755814 0.0347377 5 0.653938 0.589859 0.0640785 2.6224e-02 9.4740e-01 weaklyHypermeth 2.9138e-01 1.0000e+00 insignificant 2.1578e-01 8.3855e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00914260 8.6372e-01 lowCoverage 1.0000e+00 lowCoverage 0.789095 0.846715 -0.0785165 4 0.756154 0.856770 -0.1006158 9.9999e-01 1.1074e-04 lowCoverage 1.0000e+00 1.3843e-02 lowCoverage 1.0000e+00 5.1424e-05 lowCoverage 1.000000 8.5706e-03 lowCoverage -0.1638917 2.4328e-04 lowCoverage 0.0608205 lowCoverage 0.838017 0.755814 0.0820767 5 0.732687 0.589859 0.14282807 7.4853e-05 9.9654e-01 weaklyHypermeth 1.4971e-03 1.0000e+00 weaklyHypermeth 4.5622e-03 9.9989e-01 weaklyHypermeth 8.1468e-02 1.0000e+00 weaklyHypermeth 0.1359637 3.6719e-02 lowCoverage 6.9281e-01 lowCoverage 0.839271 0.846715 -0.03326166 4 0.812558 0.856770 -0.0442116 9.8953e-01 1.3627e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.5292e-01 5.7384e-02 lowCoverage 1.0000000 1.00000000 lowCoverage -0.0370706 3.6969e-01 lowCoverage 1.000000 lowCoverage 0.757072 0.846715 -0.1022833 4 0.707831 0.856770 -0.1489386 9.9991e-01 4.3096e-05 lowCoverage 1.0000e+00 1.1050e-03 lowCoverage 9.9999e-01 2.3346e-04 lowCoverage 1.000000 1.0612e-02 lowCoverage -0.1730343 1.1637e-02 lowCoverage 0.27706681 lowCoverage chr7 129699635 129700635 28422 CPA2 ENSG00000158516 0.25359 805 17 0.231290 709 19 0.23147 537 19 0.316456 515 14 0.3495825 367 19 0.401645 1206 19 0.217328 595 20 0.307427 558 19 0.272346 482 19 0.289289 416 20 0.273177 776 19 0.2487377 412 18 0.209306 533 18 0.586941 130 9 0.280267 546 19 0.2476415 368 15 0.192925 301 15 0.260351 598 17 0.2133644 488 19 0.275676 844 16 0.283376 286 18 0.2059677 305 13 0.280904 600 19 0.191818 366 19 0.297950 146 9 0.241550 823 19 0.279057 370 18 0.288924 310 17 0.2521536 427 19 0.189058 1013 19 0.321882 837 19 0.236083 934 19 0.1792014 612 20 0.173101 366 16 0.199017 353 10 0.1541667 84 5 0.243697 364 18 0.231939 746 19 0.180146 784 17 0.309604 653 17 0.277091 590 15 0.286230 472 16 0.289093 691 17 0.188733 0.176908 0.208160 0.224756 0.2746257 0.271472 0.192387 0.2257217 0.2343163 0.256733 0.252047 0.240165 0.154967 0.31231 0.245991 0.2094884 0.199089 0.186284 0.175997 0.230380 0.255990 0.1066146 0.26816 0.167810 0.254734 0.202046 0.207080 0.226225 0.210877 0.169737 0.249754 0.183868 0.1409547 0.117588 0.122589 0.1544020 0.217791 0.199155 0.108369 0.188883 0.131006 0.243706 0.150542 8 0.249552 0.256866 9.5299e-03 19 0.243761 0.279749 -0.0359879 0.04337075 0.9628789 weaklyHypermeth 1.00000 1.00000 insignificant 0.1350509 0.95439567 insignificant 1 1.00000 insignificant 0.0272136 0.250384 insignificant 1 insignificant 0.249575 0.252277 0.0660354 19 0.254360 0.197882 0.0564776 2.5960e-05 1.2493e-01 weaklyHypermeth 4.9030e-04 1.0000e+00 weaklyHypermeth 3.2119e-04 9.2282e-01 weaklyHypermeth 9.4468e-03 1.0000e+00 weaklyHypermeth 0.08608669 1.8130e-03 weaklyHypermeth 6.6802e-02 weaklyHypermeth 0.249866 0.228957 0.0731752 17 0.274011 0.284999 -0.0109884 2.2168e-04 9.7955e-01 weaklyHypermeth 2.0153e-02 1.0000e+00 weaklyHypermeth 1.2222e-02 9.9950e-01 weaklyHypermeth 0.763894 1.0000e+00 insignificant 0.0145078 6.3761e-01 insignificant 1.0000000 insignificant 0.256750 0.252277 0.0620431 19 0.248434 0.197882 0.05055189 5.2158e-03 9.1689e-02 weaklyHypermeth 6.5242e-02 1.0000e+00 weaklyHypermeth 1.2331e-02 7.0742e-01 weaklyHypermeth 1.9574e-01 1.0000e+00 insignificant 0.0588731 9.0009e-03 weaklyHypermeth 2.2793e-01 insignificant 0.256670 0.229611 0.05992124 17 0.228559 0.271666 -0.0431067 9.8140e-02 5.4522e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.5784e-01 8.2783e-01 insignificant 1.0000000 1.00000000 insignificant -0.0127057 6.4017e-01 insignificant 1.000000 insignificant 0.252277 0.228473 -0.0012772 17 0.197882 0.222825 -0.0249433 4.0201e-01 9.3993e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4471e-01 9.5284e-01 insignificant 1.000000 1.0000e+00 insignificant -0.0715788 3.2391e-02 weaklyHypometh 0.56395607 insignificant chr7 129800435 129801435 28429 CPA5 ENSG00000158525 0.70204 658 14 0.602846 442 15 0.47668 415 16 0.725108 596 14 0.6745768 236 15 0.767835 777 14 0.626892 322 15 0.567906 417 16 0.655562 357 15 0.763413 287 14 0.734367 437 14 0.3049883 208 16 0.538910 480 14 0.583763 227 14 0.618572 403 16 0.5108405 112 11 0.376535 131 7 0.476844 726 15 0.7809463 421 12 0.729405 537 14 0.504970 272 15 0.2917153 335 14 0.744279 318 16 0.642906 204 14 0.718253 241 15 0.529518 672 14 0.610951 328 14 0.695393 193 14 0.6493665 458 14 0.516563 786 16 0.584607 693 16 0.714133 634 14 0.0468791 654 16 0.050746 287 16 0.114742 254 8 0.0384615 79 11 0.107887 461 16 0.052260 808 16 0.625615 448 14 0.364679 441 14 0.539063 522 15 0.387610 498 13 0.509931 572 15 0.743249 0.609788 0.569654 0.809572 0.7662708 0.825113 0.700525 0.7069958 0.7231958 0.786688 0.820056 0.330690 0.638409 0.71236 0.737851 0.5825902 0.473746 0.491657 0.812263 0.766512 0.646201 0.3553998 0.75586 0.750397 0.742801 0.752257 0.729602 0.794288 0.684760 0.670494 0.685205 0.822827 0.0508412 0.049195 0.080815 0.0383456 0.074381 0.065472 0.717127 0.467045 0.651836 0.336546 0.597571 10 0.683844 0.658551 3.0659e-03 14 0.585194 0.480088 0.1051068 0.24274226 0.9738098 insignificant 1.00000 1.00000 insignificant 0.8815572 0.62536907 insignificant 1 1.00000 insignificant 0.0106804 0.822962 insignificant 1 insignificant 0.683837 0.070079 0.6013940 14 0.590238 0.057450 0.5327871 4.3423e-103 1.0000e+00 hypermethylated 4.3423e-100 1.0000e+00 hypermethylated 7.5847e-30 1.0000e+00 hypermethylated 7.5847e-27 1.0000e+00 hypermethylated 0.54240558 1.4032e-14 hypermethylated 2.3386e-12 hypermethylated 0.683934 0.537283 0.1480993 14 0.598646 0.440832 0.1578144 6.0426e-11 1.0000e+00 weaklyHypermeth 6.0426e-08 1.0000e+00 weaklyHypermeth 2.5536e-05 1.0000e+00 weaklyHypermeth 0.012768 1.0000e+00 weaklyHypermeth 0.1255218 6.1769e-02 insignificant 1.0000000 insignificant 0.659188 0.070079 0.5776987 16 0.558996 0.057450 0.50154548 3.4053e-71 1.0000e+00 hypermethylated 3.4053e-68 1.0000e+00 hypermethylated 9.7092e-27 1.0000e+00 hypermethylated 9.7092e-24 1.0000e+00 hypermethylated 0.5317252 2.4644e-09 hypermethylated 2.7382e-07 hypermethylated 0.659064 0.537283 0.14912357 14 0.555891 0.440832 0.1150592 3.4307e-08 1.0000e+00 weaklyHypermeth 1.1436e-05 1.0000e+00 weaklyHypermeth 7.4854e-06 1.0000e+00 weaklyHypermeth 0.0074854 1.00000000 weaklyHypermeth 0.1148414 9.2676e-02 insignificant 1.000000 insignificant 0.070079 0.537127 -0.4493615 14 0.057450 0.428285 -0.3708349 1.0000e+00 4.9409e-32 hypomethylated 1.0000e+00 4.2706e-29 hypomethylated 1.0000e+00 2.3461e-15 hypomethylated 1.000000 2.3461e-12 hypomethylated -0.4168838 6.0710e-04 hypomethylated 0.04015520 hypomethylated chr7 130874435 130875435 28474 MKLN1 ENSG00000128585 0.91368 108 5 0.858374 174 5 0.72764 99 2 0.937519 132 5 0.7582011 77 5 0.947202 186 5 0.758102 114 5 0.912883 158 5 0.728371 88 5 0.888889 58 3 0.891581 294 5 0.8066667 44 2 0.970122 77 5 0.966667 54 5 0.970000 87 2 0.7083333 85 2 0.333333 6 0 0.594765 105 4 0.9662585 82 5 0.937847 123 5 0.859333 58 5 0.9444444 28 2 0.899752 61 5 0.829840 106 5 1.000000 8 0 0.931463 209 5 0.927500 50 4 0.744008 79 5 0.9593137 91 5 0.840181 251 5 0.902283 247 5 0.941250 161 5 0.8929972 126 5 0.873214 63 5 0.520635 110 4 1.0000000 3 0 0.902260 138 5 0.843548 129 5 0.905040 90 5 0.924947 160 5 0.855044 86 5 0.921875 38 2 0.916027 188 5 0.863765 0.846112 0.778432 0.847732 0.8304659 0.933490 0.925067 0.8942263 0.8527658 0.941756 0.913426 0.815860 0.952621 0.91263 0.935081 0.7418352 0.618265 0.841747 0.915855 0.848142 0.739489 0.8163082 0.92226 0.831904 0.991960 0.889727 0.785988 0.922957 0.943094 0.897368 0.885563 0.898740 0.7591036 0.625144 0.689196 NA 0.730272 0.866165 0.843246 0.866668 0.816248 0.889354 0.874036 2 0.879591 0.897702 -1.5731e-02 5 0.743594 0.860748 -0.1171536 0.86778104 0.1355440 insignificant 1.00000 1.00000 insignificant 0.6829242 0.17580324 insignificant 1 1.00000 insignificant -0.0694590 0.100983 lowCoverage 1 lowCoverage 0.879591 0.810193 0.0713069 5 0.743594 0.873992 -0.1303972 1.4543e-02 9.2503e-01 weaklyHypermeth 1.7313e-01 1.0000e+00 insignificant 1.0012e-01 1.9503e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00995408 8.9910e-01 lowCoverage 1.0000e+00 lowCoverage 0.879591 0.889680 0.0012608 5 0.743594 0.924476 -0.1808820 8.3633e-01 6.5867e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.6055e-01 6.6726e-01 insignificant 1.000000 1.0000e+00 insignificant -0.0757650 5.7985e-02 lowCoverage 1.0000000 lowCoverage 0.897702 0.810193 0.0870295 5 0.860748 0.873992 -0.01324362 1.5212e-02 8.9717e-01 weaklyHypermeth 1.7485e-01 1.0000e+00 insignificant 1.6904e-01 8.4858e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0595050 4.2912e-01 lowCoverage 1.0000e+00 lowCoverage 0.897702 0.889680 0.01311340 5 0.860748 0.924476 -0.0637285 4.0024e-01 3.6421e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.8338e-01 8.8546e-01 insignificant 1.0000000 1.00000000 insignificant -0.0063059 7.9520e-01 lowCoverage 1.000000 lowCoverage 0.810193 0.889680 -0.0620503 5 0.873992 0.924476 -0.0504848 9.2997e-01 1.0904e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.5693e-01 3.7303e-01 insignificant 1.000000 1.0000e+00 insignificant -0.0658109 3.7729e-01 lowCoverage 1.00000000 lowCoverage chr7 130940835 130941835 28480 PODXL ENSG00000128567 0.05211 298 6 0.127287 314 6 0.13406 194 6 0.089067 268 6 0.0502137 163 5 0.152739 465 6 0.196259 197 6 0.068630 202 6 0.051408 314 6 0.063019 193 5 0.194708 239 5 0.1099907 182 6 0.039503 218 6 0.142701 234 6 0.042695 324 6 0.0810023 171 5 0.156250 50 4 0.164200 254 5 0.0064103 167 6 0.045829 304 6 0.226111 102 5 0.1167309 126 5 0.238919 134 5 0.279023 171 5 0.083090 92 4 0.018952 300 5 0.026055 151 5 0.049512 160 5 0.0058824 142 5 0.043001 435 5 0.028460 476 6 0.218104 410 6 0.6321296 176 5 0.433232 80 5 0.834783 162 3 0.4166667 10 0 0.644502 152 5 0.584596 334 6 0.138213 304 6 0.396487 208 6 0.141423 201 6 0.254676 186 6 0.209590 163 5 0.050930 0.069677 0.137687 0.096012 0.0607283 0.153605 0.075781 0.0614612 0.0621081 0.064531 0.084218 0.107178 0.035597 0.13802 0.041257 0.0934870 0.128979 0.162810 0.000000 0.039820 0.075247 0.1113500 0.08828 0.133006 0.086267 0.018053 0.032358 0.047860 0.006536 0.042949 0.032267 0.066383 0.5641277 0.446742 0.663900 0.4374508 0.652428 0.438089 0.178042 0.308207 0.131831 0.251732 0.211209 5 0.086298 0.058911 2.4295e-02 6 0.151625 0.136489 0.0151361 0.00967160 0.9654953 weaklyHypermeth 1.00000 1.00000 insignificant 0.0600372 0.88964203 insignificant 1 1.00000 insignificant -0.0127492 0.693708 insignificant 1 insignificant 0.086298 0.544858 -0.4934065 6 0.151625 0.665426 -0.5138010 1.0000e+00 1.7341e-46 hypomethylated 1.0000e+00 1.7341e-43 hypomethylated 1.0000e+00 3.9831e-11 hypomethylated 1.0000e+00 3.9831e-08 hypomethylated -0.49258055 4.2329e-04 lowCoverage 2.0156e-02 lowCoverage 0.086298 0.198682 -0.1209333 6 0.151625 0.225031 -0.0734065 9.9896e-01 1.8982e-09 weaklyHypometh 1.0000e+00 6.3275e-07 weaklyHypometh 9.9999e-01 2.0840e-06 weaklyHypometh 1.000000 1.0420e-03 weaklyHypometh -0.1296736 5.0045e-02 insignificant 1.0000000 insignificant 0.058911 0.544858 -0.4819006 6 0.136489 0.665426 -0.52893706 1.0000e+00 4.2451e-28 hypomethylated 1.0000e+00 4.2451e-25 hypomethylated 1.0000e+00 8.1697e-08 hypomethylated 1.0000e+00 8.1697e-05 hypomethylated -0.4798314 2.0037e-04 lowCoverage 1.1786e-02 lowCoverage 0.058911 0.198682 -0.14514481 6 0.136489 0.225031 -0.0885426 9.9901e-01 1.6100e-09 weaklyHypometh 1.0000e+00 1.1965e-06 weaklyHypometh 9.9971e-01 2.9365e-05 weaklyHypometh 1.0000000 0.01468265 weaklyHypometh -0.1169245 7.2648e-02 insignificant 1.000000 insignificant 0.544858 0.198682 0.4161950 6 0.665426 0.225031 0.4403945 7.9727e-11 1.0000e+00 hypermethylated 7.9727e-08 1.0000e+00 hypermethylated 4.8009e-05 1.0000e+00 hypermethylated 0.024005 1.0000e+00 hypermethylated 0.3629069 1.3890e-03 lowCoverage 0.06614110 lowCoverage chr7 133784035 133785035 28538 ENSG00000221513 0.83415 120 6 0.627494 105 6 0.65272 71 6 0.662348 106 6 0.6329365 62 6 0.768137 151 6 0.520503 45 6 0.654923 108 6 0.726768 54 6 0.852381 56 6 0.579836 162 6 0.8333333 13 0 0.892992 78 6 0.809524 38 6 0.645202 31 2 0.8571429 15 0 0.000000 4 0 0.746819 148 6 0.7100970 81 6 0.816687 126 6 0.740909 42 5 0.9462963 57 6 0.767710 107 6 0.620370 32 2 0.824405 37 4 0.716885 110 6 0.611479 52 5 0.871429 17 2 0.7749398 61 6 0.861506 115 6 0.508183 97 6 0.748679 188 6 0.8058858 95 6 0.690657 68 6 0.645542 125 6 0.7777778 14 0 0.628676 52 2 0.619245 118 6 0.852503 129 6 0.853175 91 6 0.859091 129 6 0.832011 48 6 0.606349 104 6 0.851671 0.616413 0.603204 0.771998 0.6718107 0.788130 0.556486 0.7669235 0.7641975 0.847325 0.802860 0.802469 0.893027 0.78272 0.643565 0.8641975 0.379157 0.790544 0.716294 0.823199 0.847699 0.9300412 0.77159 0.659808 0.862213 0.738312 0.608899 0.828395 0.760043 0.865015 0.845398 0.766985 0.7990546 0.683408 0.757325 0.8189300 0.535403 0.644057 0.812259 0.856379 0.827553 0.830933 0.699177 0 0.755400 0.783607 -2.4358e-02 6 0.616660 0.517923 0.0987370 0.93767472 0.5896664 insignificant 1.00000 1.00000 insignificant 0.9061028 0.39670073 insignificant 1 1.00000 insignificant -0.0581997 0.306874 lowCoverage 1 lowCoverage 0.755089 0.711864 0.0462523 6 0.574067 0.730304 -0.1562368 2.5896e-01 9.9919e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.9269e-01 9.3985e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00343113 9.4998e-01 lowCoverage 1.0000e+00 lowCoverage 0.755880 0.804391 -0.0514770 6 0.685178 0.813425 -0.1282465 9.9570e-01 2.0274e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9896e-01 9.5709e-02 insignificant 1.000000 1.0000e+00 insignificant -0.1094262 1.2046e-01 lowCoverage 1.0000000 lowCoverage 0.784464 0.711864 0.0690355 6 0.575470 0.730304 -0.15483345 1.2332e-01 9.6972e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.6216e-01 9.8841e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0547686 2.7475e-01 lowCoverage 1.0000e+00 lowCoverage 0.784228 0.804391 -0.02728848 6 0.519915 0.813425 -0.2935098 9.8857e-01 2.5975e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6461e-01 4.4251e-01 insignificant 1.0000000 1.00000000 insignificant -0.0512265 4.1973e-01 insignificant 1.000000 insignificant 0.711253 0.804000 -0.0968491 6 0.696592 0.790103 -0.0935109 9.9994e-01 6.1577e-03 weaklyHypometh 1.0000e+00 8.9242e-02 weaklyHypometh 1.0000e+00 1.3454e-02 weaklyHypometh 1.000000 2.3197e-01 insignificant -0.1059951 1.1238e-01 lowCoverage 1.00000000 lowCoverage chr7 133904635 133905635 28543 AKR1B10 ENSG00000198074 0.73307 186 6 0.627842 335 6 0.49632 95 6 0.634206 185 6 0.5158207 83 6 0.635037 205 5 0.728991 144 6 0.795435 108 6 0.582206 98 6 0.738607 70 5 0.600189 325 6 0.7357143 36 5 0.743056 88 5 0.641667 53 5 0.675000 76 5 0.7954545 33 3 0.766250 55 3 0.830993 133 5 0.8873822 90 6 0.735249 146 5 0.670184 53 5 0.8224401 57 4 0.698359 138 6 0.652381 79 5 0.822222 33 3 0.770335 328 6 0.620623 56 5 0.678571 54 4 0.5458199 129 6 0.741040 335 6 0.736598 268 6 0.816041 124 5 0.6372894 204 6 0.429694 80 5 0.603230 378 6 0.8541667 17 1 0.605262 216 6 0.693300 304 6 0.683281 335 6 0.860001 230 6 0.792408 162 6 0.863118 89 3 0.833719 205 6 0.738099 0.595985 0.503692 0.737601 0.5720568 0.695921 0.692980 0.7643112 0.6111484 0.638571 0.631207 0.744459 0.693539 0.63995 0.622435 0.7229908 0.731926 0.778475 0.870312 0.692688 0.695480 0.8168514 0.56234 0.599620 0.840580 0.746926 0.644052 0.751812 0.649740 0.656585 0.672573 0.722809 0.6951260 0.554282 0.544816 0.8304865 0.745426 0.696570 0.788981 0.815507 0.773553 0.786937 0.807536 2 0.738292 0.780532 -8.2528e-03 6 0.725762 0.672041 0.0537204 0.76725195 0.6065500 insignificant 1.00000 1.00000 insignificant 0.8236993 0.87000424 insignificant 1 1.00000 insignificant -0.0196271 0.567528 insignificant 1 insignificant 0.738189 0.622185 0.0946446 6 0.686585 0.568260 0.1183248 1.4718e-05 3.1976e-03 weaklyHypermeth 2.9308e-04 3.1976e-01 weaklyHypermeth 4.3921e-02 4.7057e-02 weaklyHypermeth 5.7791e-01 1.0000e+00 insignificant 0.05776720 3.7546e-01 insignificant 1.0000e+00 insignificant 0.738480 0.813908 -0.0870384 6 0.758013 0.707611 0.0504025 9.9910e-01 5.1032e-05 weaklyHypometh 1.0000e+00 7.2903e-03 weaklyHypometh 9.6401e-01 6.8413e-04 weaklyHypometh 1.000000 8.5517e-02 weaklyHypometh -0.1115812 2.3854e-02 weaklyHypometh 0.9095076 insignificant 0.780266 0.622185 0.1389318 6 0.625190 0.568260 0.05693008 1.1784e-04 6.6469e-02 weaklyHypermeth 2.1425e-03 1.0000e+00 weaklyHypermeth 8.5805e-02 4.5213e-01 insignificant 9.8275e-01 1.0000e+00 insignificant 0.0773943 2.4979e-01 insignificant 1.0000e+00 insignificant 0.782424 0.813908 -0.06629539 6 0.768047 0.707611 0.0604363 9.9178e-01 2.3896e-03 weaklyHypometh 1.0000e+00 3.4137e-01 insignificant 8.7119e-01 2.5126e-02 weaklyHypometh 1.0000000 1.00000000 insignificant -0.0919542 5.5415e-02 insignificant 1.000000 insignificant 0.623225 0.814706 -0.1793409 6 0.662970 0.825546 -0.1625761 9.7209e-01 1.3523e-03 weaklyHypometh 1.0000e+00 2.4586e-02 weaklyHypometh 9.8167e-01 1.1848e-03 weaklyHypometh 1.000000 3.8220e-02 weaklyHypometh -0.1693484 3.2709e-02 weaklyHypometh 0.56395607 insignificant chr7 135276535 135277535 28584 ENSG00000222219 0.66623 168 5 0.655714 98 5 0.57407 101 5 0.409279 113 5 0.7072511 67 5 0.527605 267 5 0.719464 99 5 0.840321 98 5 0.615158 74 5 0.680860 67 3 0.706195 203 5 0.7666667 28 3 0.576003 106 5 0.833333 10 1 0.548080 77 4 0.6878788 35 3 0.650855 44 3 0.514557 114 5 0.6932915 125 5 0.626626 226 5 0.841558 49 5 0.6036729 90 5 0.725096 103 5 0.623542 88 5 0.694231 27 2 0.634197 143 5 0.691667 72 5 0.755942 59 5 0.5133779 105 5 0.657931 163 5 0.703973 151 5 0.599719 274 5 0.6619048 87 5 0.695286 73 5 0.641697 124 5 0.5832014 50 3 0.414744 67 5 0.710522 180 5 0.569759 195 5 0.767647 157 5 0.678840 134 5 0.689444 111 5 0.667561 153 5 0.750740 0.736524 0.702538 0.766222 0.6984536 0.737755 0.727893 0.7382552 0.7052849 0.774559 0.796704 0.777831 0.785770 0.79702 0.741518 0.6850515 0.785417 0.713072 0.734250 0.803626 0.882314 0.8315144 0.80495 0.871589 0.788808 0.711577 0.804167 0.832153 0.789944 0.779348 0.792937 0.728718 0.7292096 0.675590 0.652588 0.7573544 0.716392 0.706762 0.774796 0.825221 0.735646 0.763030 0.727481 3 0.731132 0.768882 -3.9385e-02 5 0.621456 0.573098 0.0483584 0.88646275 0.0279543 weaklyHypometh 1.00000 1.00000 insignificant 0.9611025 0.03380801 weaklyHypometh 1 1.00000 insignificant -0.0204370 0.554322 lowCoverage 1 lowCoverage 0.731407 0.693632 0.0368418 5 0.615805 0.529322 0.0864829 1.3839e-02 9.0039e-01 weaklyHypermeth 1.6674e-01 1.0000e+00 insignificant 1.9311e-02 9.8712e-01 weaklyHypermeth 2.9709e-01 1.0000e+00 insignificant 0.03207941 5.4268e-01 lowCoverage 1.0000e+00 lowCoverage 0.730969 0.733333 -0.0192851 5 0.599138 0.621475 -0.0223364 9.1652e-01 1.2223e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.0050e-01 1.6783e-01 insignificant 1.000000 1.0000e+00 insignificant -0.0246784 5.4729e-01 lowCoverage 1.0000000 lowCoverage 0.769522 0.693632 0.0769129 5 0.569735 0.529322 0.04041301 1.0319e-04 9.1945e-01 weaklyHypermeth 2.0233e-03 1.0000e+00 weaklyHypermeth 9.0159e-04 9.9826e-01 weaklyHypermeth 2.1467e-02 1.0000e+00 weaklyHypermeth 0.0525164 3.3151e-01 lowCoverage 1.0000e+00 lowCoverage 0.769871 0.733333 0.01948461 5 0.603068 0.621475 -0.0184063 3.7834e-01 5.1433e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.9672e-01 7.6077e-01 insignificant 1.0000000 1.00000000 insignificant -0.0042414 9.1784e-01 lowCoverage 1.000000 lowCoverage 0.692573 0.733601 -0.0587785 5 0.462082 0.615019 -0.1529364 9.5614e-01 8.8507e-03 weaklyHypometh 1.0000e+00 1.2634e-01 insignificant 9.9571e-01 5.4589e-03 weaklyHypometh 1.000000 1.0330e-01 insignificant -0.0567578 3.2702e-01 lowCoverage 1.00000000 lowCoverage chr7 135401035 135402035 28589 LUZP6 ENSG00000105887 0.77640 412 11 0.648424 239 11 0.59451 154 11 0.768289 285 11 0.6865697 115 9 0.754168 367 11 0.733112 234 8 0.735755 226 11 0.741686 151 8 0.795928 185 11 0.775905 357 11 0.4463138 92 7 0.752141 241 11 0.942857 22 2 0.802100 180 11 0.5657090 86 10 0.604048 110 7 0.743986 282 11 0.7860922 281 11 0.758110 320 11 0.821717 47 4 0.8161332 117 10 0.704923 212 11 0.642069 67 5 0.886946 65 5 0.762164 340 11 0.791681 112 8 0.754663 50 5 0.7894653 211 11 0.759188 382 11 0.763143 314 11 0.765596 417 11 0.6678974 224 11 0.701840 148 11 0.765891 222 11 0.5698665 71 6 0.695758 94 8 0.769140 368 11 0.705213 340 11 0.769586 390 11 0.767087 270 11 0.797007 286 11 0.780408 330 11 0.776722 0.709889 0.638263 0.843585 0.7253284 0.797464 0.779718 0.7613817 0.7908024 0.813993 0.818781 0.620214 0.786619 0.83583 0.850329 0.6188142 0.589897 0.797553 0.813409 0.812121 0.807242 0.8456543 0.75269 0.643254 0.879613 0.805861 0.774642 0.756101 0.825520 0.785633 0.809954 0.780467 0.7453942 0.743793 0.798725 0.6043506 0.723452 0.791408 0.774255 0.821523 0.797397 0.825387 0.847513 5 0.747868 0.773350 -2.2823e-02 11 0.767856 0.766767 0.0010887 0.97126934 0.1078145 insignificant 1.00000 1.00000 insignificant 0.9971761 0.01076101 weaklyHypometh 1 1.00000 insignificant -0.0508687 0.094939 insignificant 1 insignificant 0.747577 0.737356 0.0152343 11 0.748511 0.708706 0.0398050 8.3092e-02 5.2326e-01 insignificant 7.8389e-01 1.0000e+00 insignificant 3.9338e-01 7.6921e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02553998 5.1695e-01 insignificant 1.0000e+00 insignificant 0.747461 0.776609 -0.0401101 11 0.725648 0.766022 -0.0403736 9.3255e-01 5.8245e-03 weaklyHypometh 1.0000e+00 3.4262e-01 insignificant 8.4945e-01 1.6509e-02 weaklyHypometh 1.000000 9.7113e-01 insignificant -0.0432550 1.4300e-01 insignificant 1.0000000 insignificant 0.773059 0.737356 0.0359949 11 0.747331 0.708706 0.03862557 2.7187e-02 9.3836e-01 weaklyHypermeth 2.9997e-01 1.0000e+00 insignificant 8.5709e-02 9.9635e-01 insignificant 9.8275e-01 1.0000e+00 insignificant 0.0764087 5.6803e-02 insignificant 9.0921e-01 insignificant 0.773196 0.776609 -0.01619943 11 0.754665 0.766022 -0.0113573 7.6135e-01 1.5048e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.4649e-01 2.1629e-01 insignificant 1.0000000 1.00000000 insignificant 0.0076137 7.5034e-01 insignificant 1.000000 insignificant 0.737778 0.776609 -0.0541154 11 0.727679 0.766022 -0.0383427 9.2627e-01 2.1215e-03 weaklyHypometh 1.0000e+00 3.7219e-02 weaklyHypometh 8.0767e-01 6.1862e-03 weaklyHypometh 1.000000 1.1248e-01 insignificant -0.0687950 7.9029e-02 insignificant 1.00000000 insignificant chr7 138035035 138036035 28647 SVOPL ENSG00000157703 0.75829 266 10 0.749028 224 10 0.73777 169 10 0.898354 252 9 0.7221612 102 9 0.803198 312 10 0.819613 106 9 0.808124 217 10 0.723039 162 9 0.877546 150 10 0.785374 302 10 0.7242647 67 3 0.800007 211 10 0.800992 49 5 0.841288 113 8 0.7676768 46 3 0.702857 32 4 0.766825 271 8 0.8631597 118 7 0.827688 282 10 0.733433 88 6 0.8300926 74 4 0.795960 132 7 0.822451 107 10 0.790563 111 6 0.886830 233 10 0.816544 113 10 0.735556 41 3 0.7847110 177 10 0.831529 280 10 0.806643 247 10 0.848845 323 10 0.6268434 241 10 0.606888 91 9 0.662451 300 10 0.6041414 54 4 0.734921 85 7 0.533342 268 10 0.821894 220 10 0.842041 259 9 0.790153 228 10 0.858340 192 6 0.789180 304 9 0.831917 0.808390 0.823823 0.905362 0.8003099 0.883285 0.867877 0.8596331 0.7802102 0.912407 0.848563 0.778221 0.873505 0.87161 0.896226 0.9014947 0.686147 0.856094 0.886385 0.867305 0.802170 0.8790584 0.88778 0.894129 0.878556 0.931690 0.850423 0.766498 0.874006 0.894044 0.855147 0.894781 0.5784387 0.500830 0.702543 0.6316422 0.668989 0.429129 0.862825 0.904988 0.862750 0.853567 0.860079 3 0.842365 0.871755 -2.3314e-02 10 0.801177 0.818840 -0.0176634 0.96583247 0.0011037 weaklyHypometh 1.00000 0.30569 insignificant 0.9595110 0.01040115 weaklyHypometh 1 1.00000 insignificant -0.0180671 0.314742 insignificant 1 insignificant 0.842365 0.587103 0.2608038 10 0.801177 0.631208 0.1699691 1.1322e-24 9.8124e-01 hypermethylated 8.7094e-23 1.0000e+00 hypermethylated 1.2188e-07 9.7556e-01 hypermethylated 9.3756e-06 1.0000e+00 hypermethylated 0.16076488 1.0016e-03 weaklyHypermeth 4.3548e-02 weaklyHypermeth 0.842365 0.862843 -0.0092375 9 0.801177 0.809229 -0.0080523 8.8888e-01 4.7217e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3246e-01 3.8056e-01 insignificant 1.000000 1.0000e+00 insignificant -0.0314592 1.1603e-01 insignificant 1.0000000 insignificant 0.871755 0.587103 0.2873793 10 0.818840 0.631208 0.18763246 1.0466e-19 9.9864e-01 hypermethylated 8.0511e-18 1.0000e+00 hypermethylated 6.4750e-07 9.9644e-01 hypermethylated 5.8863e-05 1.0000e+00 hypermethylated 0.1788320 5.3106e-04 weaklyHypermeth 2.6553e-02 weaklyHypermeth 0.871755 0.862843 0.01258887 9 0.818840 0.809229 0.0096110 2.6996e-02 8.1008e-01 weaklyHypermeth 8.9987e-01 1.0000e+00 insignificant 9.5225e-02 7.1258e-01 insignificant 1.0000000 1.00000000 insignificant -0.0133922 4.8874e-01 insignificant 1.000000 insignificant 0.587103 0.862843 -0.2871166 9 0.631208 0.809229 -0.1780214 9.9550e-01 2.4006e-09 hypomethylated 1.0000e+00 1.3337e-07 hypomethylated 9.9669e-01 4.4510e-06 hypomethylated 1.000000 4.6657e-04 hypomethylated -0.1922241 3.6215e-04 weaklyHypometh 0.03017922 weaklyHypometh chr7 138233135 138234135 28657 ENSG00000199646 0.80386 355 5 0.835556 386 5 0.80237 210 5 0.808965 467 5 0.7818206 79 5 0.815099 459 5 0.749044 114 5 0.874481 214 5 0.909181 183 4 0.947853 202 4 0.784895 388 5 0.7878788 81 4 0.909556 306 5 0.711111 18 3 0.783260 145 5 0.8827778 44 4 0.791729 61 4 0.818889 507 5 0.9181881 226 4 0.795198 343 5 0.918519 79 4 0.8230397 197 4 0.850038 263 5 0.904530 115 4 0.876923 171 4 0.822206 503 5 0.938471 243 4 0.837374 51 4 0.8341999 402 5 0.861291 371 5 0.819572 387 5 0.851290 473 5 0.8267852 391 5 0.889934 275 4 0.715159 266 5 0.9232575 86 3 0.790331 114 5 0.877628 477 5 0.859195 320 4 0.760912 575 4 0.786255 421 4 0.849187 443 4 0.752033 378 4 0.900926 0.874434 0.851648 0.922518 0.8965254 0.894287 0.830607 0.9085416 0.9295447 0.945712 0.879510 0.873890 0.943022 0.84801 0.869516 0.9332006 0.767572 0.907168 0.921595 0.896887 0.919321 0.9275414 0.92809 0.914097 0.893122 0.925118 0.925620 0.884948 0.928864 0.913689 0.926103 0.891245 0.8831317 0.853664 0.871633 0.9102165 0.846378 0.937420 0.920395 0.927435 0.910965 0.928542 0.928008 4 0.888889 0.911828 -2.0276e-02 5 0.822550 0.856235 -0.0336852 0.99819629 0.0087025 weaklyHypometh 1.00000 0.70214 insignificant 0.9969933 0.00562896 weaklyHypometh 1 0.95461 insignificant -0.0358687 0.055686 lowCoverage 1 lowCoverage 0.888889 0.889994 0.0030041 5 0.822550 0.816967 0.0055826 8.1827e-03 8.9373e-03 weaklyHypermeth 1.0491e-01 6.6153e-01 insignificant 1.4286e-01 8.1458e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01159679 7.4317e-01 lowCoverage 1.0000e+00 lowCoverage 0.888889 0.926065 -0.0267262 4 0.822550 0.801664 0.0208860 1.7631e-01 1.4874e-03 lowCoverage 1.0000e+00 1.2395e-01 lowCoverage 5.0299e-01 1.4308e-03 lowCoverage 1.000000 1.5284e-01 lowCoverage 0.0240692 3.8743e-01 lowCoverage 1.0000000 lowCoverage 0.911828 0.889994 0.0237942 5 0.856235 0.816967 0.03926784 5.2193e-03 2.7725e-01 weaklyHypermeth 6.5242e-02 1.0000e+00 weaklyHypermeth 2.6630e-02 3.9650e-01 weaklyHypermeth 3.8594e-01 1.0000e+00 insignificant 0.0242719 4.9027e-01 lowCoverage 1.0000e+00 lowCoverage 0.911828 0.926065 -0.00600737 4 0.856235 0.801664 0.0545713 1.8097e-01 3.3789e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 3.3611e-01 4.3396e-01 lowCoverage 1.0000000 1.00000000 lowCoverage 0.0599379 5.2357e-02 lowCoverage 1.000000 lowCoverage 0.889994 0.926065 -0.0272873 4 0.816967 0.801664 0.0153035 3.5907e-01 1.9683e-02 lowCoverage 1.0000e+00 2.5234e-01 lowCoverage 2.6262e-01 7.7698e-02 lowCoverage 1.000000 9.2498e-01 lowCoverage 0.0356660 3.7662e-01 lowCoverage 1.00000000 lowCoverage chr7 138377235 138378235 28661 ZC3HAV1L ENSG00000146858 0.82028 76 4 0.772705 74 6 0.66227 61 3 0.831725 63 4 0.7128882 50 3 0.684609 70 5 0.610195 69 5 0.769333 66 5 0.764957 33 3 0.841905 37 3 0.608856 159 6 0.7500000 14 1 0.852537 70 5 0.696429 21 2 0.735119 38 3 0.7500000 16 1 0.888889 6 0 0.813859 55 3 0.8962963 59 5 0.811966 59 5 0.397059 35 3 0.8750000 8 0 0.811111 36 4 0.807407 36 4 0.728571 31 4 0.891694 71 4 0.642857 38 4 0.690476 19 2 0.8472222 44 4 0.840909 67 5 0.880060 79 5 0.801122 59 5 0.7025397 64 5 0.825126 57 5 0.777146 103 5 0.7500000 8 0 0.676389 72 5 0.668354 69 5 0.803333 77 4 0.710714 94 4 0.698758 63 4 0.800000 23 3 0.738562 73 4 0.888356 0.761345 0.659131 0.832599 0.8761592 0.866154 0.779609 0.8110004 0.8488372 0.875858 0.859566 0.947229 0.808159 0.86457 0.801357 0.9418605 0.899828 0.907925 0.893196 0.875373 0.638167 0.7751702 0.86693 0.860465 0.688859 0.869449 0.711141 0.899225 0.887597 0.806554 0.877187 0.736919 0.7583241 0.825846 0.690451 0.7758745 0.733850 0.821862 0.833333 0.808140 0.781935 0.855814 0.862745 1 0.793419 0.787763 -2.9618e-03 4 0.710954 0.822730 -0.1117763 0.80288850 0.2218544 lowCoverage 1.00000 1.00000 lowCoverage 0.5488415 0.62463139 lowCoverage 1 1.00000 lowCoverage -0.0040500 0.928743 lowCoverage 1 lowCoverage 0.794991 0.766756 0.0397649 5 0.679287 0.668343 0.0109441 4.3124e-02 8.2280e-01 weaklyHypermeth 4.4921e-01 1.0000e+00 insignificant 2.5370e-02 9.4036e-01 weaklyHypermeth 3.7308e-01 1.0000e+00 insignificant 0.03048158 3.5164e-01 lowCoverage 1.0000e+00 lowCoverage 0.791971 0.760606 0.0023901 4 0.639858 0.700601 -0.0607432 9.0876e-01 3.5902e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 5.6876e-01 6.7895e-01 lowCoverage 1.000000 1.0000e+00 lowCoverage 0.0134672 6.4969e-01 lowCoverage 1.0000000 lowCoverage 0.785992 0.768817 0.0416709 4 0.795891 0.763820 0.03207034 3.1906e-01 9.3414e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 5.2649e-01 9.4412e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0345316 4.7936e-01 lowCoverage 1.0000e+00 lowCoverage 0.787763 0.759878 0.00011183 4 0.822730 0.667335 0.1553950 7.7102e-01 7.0332e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 5.8136e-01 7.7869e-01 lowCoverage 1.0000000 1.00000000 lowCoverage 0.0175173 7.0901e-01 lowCoverage 1.000000 lowCoverage 0.766756 0.760870 -0.0530545 4 0.668343 0.709085 -0.0407422 9.9892e-01 2.7400e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.9614e-01 2.7827e-01 lowCoverage 1.000000 1.0000e+00 lowCoverage -0.0170143 6.2291e-01 lowCoverage 1.00000000 lowCoverage chr7 138721435 138722435 28673 LUC7L2 ENSG00000146963 0.62679 127 9 0.598678 135 8 0.47572 67 7 0.558639 147 7 0.6007035 49 6 0.627415 220 9 0.644444 54 4 0.705559 119 8 0.563988 47 5 0.650683 59 7 0.686747 225 8 0.5250000 27 1 0.760714 54 5 0.738467 56 6 0.654293 70 8 0.4642857 17 0 0.500000 14 2 0.665721 132 9 0.7880926 124 8 0.755375 157 9 0.620370 23 0 1.0000000 17 1 0.693575 77 6 0.757292 52 8 0.666667 33 2 0.709788 153 8 0.700893 79 4 0.685268 36 4 0.6557319 84 8 0.615394 171 8 0.713360 133 8 0.604524 186 9 0.5348214 125 8 0.568254 55 6 0.596703 99 7 0.5833333 14 0 0.511465 80 8 0.666975 181 8 0.584326 114 8 0.710543 181 10 0.542239 128 8 0.686308 54 3 0.758458 144 8 0.780802 0.690370 0.691881 0.766623 0.7244559 0.766938 0.703196 0.7755266 0.7271689 0.709969 0.768289 0.578082 0.751468 0.80667 0.745624 0.4129510 NA 0.811725 0.851490 0.809529 0.687215 0.9029170 0.78966 0.834132 0.789015 0.783602 0.755382 0.676098 0.707219 0.788771 0.774837 0.734295 0.6180864 0.665503 0.532801 0.5635544 0.594830 0.665627 0.771880 0.792397 0.710017 0.763817 0.774194 1 0.723158 0.700192 -6.3041e-04 8 0.658154 0.685045 -0.0268907 0.97460432 0.7569091 insignificant 1.00000 1.00000 insignificant 0.9927417 0.39983855 insignificant 1 1.00000 insignificant -0.0723390 0.062497 insignificant 1 insignificant 0.734358 0.616637 0.1082364 8 0.650256 0.639896 0.0103595 2.8718e-05 9.5985e-01 weaklyHypermeth 5.1282e-04 1.0000e+00 weaklyHypermeth 1.2740e-02 9.7318e-01 weaklyHypermeth 2.1593e-01 1.0000e+00 insignificant 0.05264083 1.0649e-01 insignificant 1.0000e+00 insignificant 0.722720 0.764895 -0.0097614 6 0.596001 0.639481 -0.0434800 7.2887e-01 1.7940e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.2660e-01 3.4342e-01 insignificant 1.000000 1.0000e+00 insignificant -0.0268084 5.7624e-01 insignificant 1.0000000 insignificant 0.704724 0.616637 0.1033573 8 0.679324 0.639896 0.03942801 1.8028e-04 9.9736e-01 weaklyHypermeth 3.1627e-03 1.0000e+00 weaklyHypermeth 1.0519e-03 9.9587e-01 weaklyHypermeth 2.3906e-02 1.0000e+00 weaklyHypermeth 0.1249798 4.1231e-03 weaklyHypermeth 1.3300e-01 insignificant 0.699616 0.764895 -0.00533197 6 0.627781 0.639481 -0.0117000 4.1931e-01 6.2158e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.2026e-01 7.4595e-01 insignificant 1.0000000 1.00000000 insignificant 0.0455306 3.8955e-01 insignificant 1.000000 insignificant 0.616637 0.820183 -0.1276201 6 0.639896 0.703501 -0.0636046 9.9273e-01 1.6801e-03 weaklyHypometh 1.0000e+00 3.0002e-02 weaklyHypometh 9.9568e-01 2.9543e-03 weaklyHypometh 1.000000 7.0341e-02 weaklyHypometh -0.0794492 1.3215e-01 insignificant 1.00000000 insignificant chr7 139737135 139738135 28725 ENSG00000202472 0.89280 73 4 0.862768 91 4 0.90602 89 4 0.908213 80 4 0.8181818 53 2 0.785807 111 3 0.459243 82 3 0.889855 55 3 0.898990 54 2 0.683123 58 3 0.934611 133 4 0.8938034 57 3 0.790179 75 3 NA 0 0 0.592593 68 2 0.7019608 39 2 0.927302 66 4 0.945166 55 4 0.8258924 84 4 0.711256 102 6 0.945988 55 3 0.9574074 40 2 0.898480 93 5 0.817179 48 3 0.936508 37 4 0.796139 86 3 0.766056 56 5 0.725239 58 3 0.6909722 48 3 0.698125 108 4 0.691351 104 4 0.729899 99 3 0.6309253 80 3 0.856034 78 5 0.824074 173 6 0.7736364 28 3 0.722222 36 3 0.762497 100 3 0.880078 104 5 0.901784 109 5 0.949251 105 4 0.924242 119 4 0.928030 52 4 0.824253 0.831162 0.822389 0.897457 0.9354839 0.852926 0.845713 0.8463550 0.8266106 0.857685 0.940968 0.848539 0.823541 NA 0.837515 0.8527544 0.901951 0.936380 0.830226 0.846532 0.914675 0.9345281 0.92949 0.897794 0.918843 0.823780 0.695314 0.783085 0.812276 0.828574 0.808784 0.859552 0.8298620 0.718179 0.904421 0.7758409 0.890591 0.779280 0.877201 0.924927 0.986935 0.952753 0.800098 1 0.868772 0.837740 3.4552e-02 3 0.856972 0.825632 0.0313401 0.14096497 0.8316869 lowCoverage 1.00000 1.00000 lowCoverage 0.3721493 0.73626558 lowCoverage 1 1.00000 lowCoverage 0.0075422 0.860477 lowCoverage 1 lowCoverage 0.868772 0.832323 0.0319954 3 0.856972 0.795342 0.0616301 1.2467e-01 7.5825e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 1.2031e-01 9.7239e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.05042258 2.7222e-01 lowCoverage 1.0000e+00 lowCoverage 0.868772 0.907975 -0.0282819 2 0.856972 0.894104 -0.0371320 2.7994e-01 1.9391e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.2491e-01 4.7496e-02 lowCoverage 1.000000 1.0000e+00 lowCoverage -0.1046895 3.7032e-03 lowCoverage 0.2449655 lowCoverage 0.837740 0.832323 0.0043497 5 0.825632 0.795342 0.03028996 3.7646e-02 2.4912e-01 weaklyHypermeth 4.0480e-01 1.0000e+00 insignificant 7.3694e-02 8.4825e-01 insignificant 8.9871e-01 1.0000e+00 insignificant 0.0428803 3.5093e-01 lowCoverage 1.0000e+00 lowCoverage 0.837740 0.907975 -0.05513178 3 0.825632 0.894104 -0.0684722 9.1646e-01 6.0984e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.9043e-01 5.0049e-02 lowCoverage 1.0000000 1.00000000 lowCoverage -0.1122318 3.9062e-03 lowCoverage 0.355108 lowCoverage 0.832323 0.907975 -0.1016335 4 0.795342 0.894104 -0.0987621 3.8028e-01 2.3561e-02 lowCoverage 1.0000e+00 2.7719e-01 lowCoverage 9.9562e-01 1.3210e-02 lowCoverage 1.000000 2.3176e-01 lowCoverage -0.1551121 3.7038e-03 lowCoverage 0.10797305 lowCoverage chr7 139887835 139888835 28730 MKRN1 ENSG00000133606 0.28245 477 8 0.222526 577 8 0.36565 369 8 0.307617 518 8 0.2672752 309 8 0.449592 812 8 0.211082 367 8 0.336979 363 8 0.155420 376 8 0.363480 249 8 0.337213 491 8 0.3582552 157 8 0.239940 268 8 0.477786 132 5 0.353994 386 8 0.4938408 137 7 0.269048 286 5 0.256453 759 8 0.2133429 452 8 0.243717 597 8 0.263709 209 8 0.1477778 141 5 0.435202 399 9 0.236716 178 9 0.331222 270 6 0.274651 643 8 0.175424 398 8 0.225350 164 8 0.3078285 488 8 0.193362 740 8 0.242125 728 8 0.277230 607 8 0.0835374 413 8 0.191032 477 8 0.326226 774 8 0.0000000 72 6 0.130692 384 9 0.120827 641 8 0.271187 557 8 0.419760 584 8 0.399863 401 8 0.411057 431 8 0.384214 445 8 0.265561 0.213316 0.253563 0.339728 0.1652495 0.392502 0.273516 0.3456565 0.2284852 0.315192 0.327237 0.253314 0.123851 0.36350 0.305105 0.4390932 0.399575 0.321935 0.166831 0.294896 0.206601 0.1512600 0.41867 0.192579 0.358262 0.317144 0.170806 0.207908 0.288893 0.217432 0.186547 0.205349 0.0967763 0.074549 0.122927 0.0062674 0.057565 0.041946 0.227228 0.439950 0.383568 0.416239 0.383086 6 0.303304 0.268681 3.6973e-02 8 0.273011 0.256980 0.0160312 0.11692210 0.9900791 insignificant 1.00000 1.00000 insignificant 0.0100503 0.99982380 weaklyHypermeth 1 1.00000 insignificant 0.0510665 0.102647 insignificant 1 insignificant 0.303304 0.073524 0.2705932 8 0.273011 0.189633 0.0833785 4.1243e-18 3.3278e-01 hypermethylated 2.1707e-16 1.0000e+00 hypermethylated 2.0021e-12 9.4689e-01 hypermethylated 5.0054e-10 1.0000e+00 hypermethylated 0.16823052 1.0800e-02 weaklyHypermeth 2.4546e-01 insignificant 0.303304 0.335401 -0.0905098 8 0.273011 0.345133 -0.0721212 8.9641e-01 3.4981e-05 weaklyHypometh 1.0000e+00 5.8302e-03 weaklyHypometh 8.9183e-01 1.6273e-03 weaklyHypometh 1.000000 1.5284e-01 insignificant -0.0669334 8.0081e-02 insignificant 1.0000000 insignificant 0.268681 0.073524 0.2291751 8 0.256980 0.189633 0.06734735 3.6234e-14 6.1683e-01 hypermethylated 1.8117e-12 1.0000e+00 hypermethylated 1.2925e-08 9.2589e-01 hypermethylated 2.1542e-06 1.0000e+00 hypermethylated 0.1171640 4.9376e-02 weaklyHypermeth 8.2294e-01 insignificant 0.268681 0.335401 -0.12569904 8 0.256980 0.345133 -0.0881523 9.3763e-01 1.3017e-06 weaklyHypometh 1.0000e+00 4.3389e-04 weaklyHypometh 9.6641e-01 1.0397e-04 weaklyHypometh 1.0000000 0.03465546 weaklyHypometh -0.1179999 7.6381e-03 weaklyHypometh 0.636507 insignificant 0.073524 0.335401 -0.3671439 8 0.189633 0.345133 -0.1554997 9.9187e-01 3.7196e-13 hypomethylated 1.0000e+00 4.6495e-11 hypomethylated 9.9863e-01 1.4601e-07 hypomethylated 1.000000 2.9201e-05 hypomethylated -0.2351639 2.0598e-03 weaklyHypometh 0.08730197 weaklyHypometh chr7 142820835 142821835 28760 EPHA1 ENSG00000146904 0.73246 456 13 0.744506 321 15 0.75171 290 14 0.807233 292 13 0.7304863 172 13 0.742940 448 15 0.774067 222 15 0.802782 251 12 0.730469 214 12 0.547605 184 11 0.740894 447 16 0.7597874 153 12 0.813008 280 15 0.652564 96 8 0.772356 194 14 0.7026330 123 13 0.685971 770 11 0.777382 318 14 0.8345006 217 13 0.799745 327 15 0.808668 154 11 0.8104609 114 12 0.826933 336 14 0.801888 126 8 0.747832 150 10 0.711129 434 15 0.779919 189 11 0.823814 107 9 0.8100799 203 13 0.828146 391 13 0.784998 381 12 0.749374 435 14 0.6837682 256 14 0.735574 187 13 0.726627 394 16 0.8833333 76 6 0.794543 188 13 0.748017 429 14 0.791882 370 14 0.861470 470 14 0.763730 365 15 0.740354 405 12 0.849301 410 16 0.791532 0.783735 0.723854 0.811827 0.7849329 0.809874 0.791706 0.8686087 0.7562625 0.743256 0.820869 0.746831 0.894936 0.72767 0.826201 0.7428195 0.807000 0.851721 0.849728 0.870881 0.869297 0.7775580 0.86202 0.856164 0.860877 0.824801 0.777401 0.852823 0.849982 0.834977 0.876924 0.797462 0.7194990 0.693527 0.800132 0.9303746 0.791644 0.838859 0.891125 0.887661 0.863656 0.858178 0.869735 7 0.792518 0.821192 -3.0705e-02 13 0.707856 0.762033 -0.0541769 0.99926390 0.0052790 weaklyHypometh 1.00000 0.58656 insignificant 0.9986852 0.00815313 weaklyHypometh 1 1.00000 insignificant -0.0451152 0.017575 weaklyHypometh 1 insignificant 0.792518 0.784827 0.0110599 14 0.707856 0.749545 -0.0416893 1.2766e-02 3.1324e-01 weaklyHypermeth 1.5569e-01 1.0000e+00 insignificant 6.5000e-01 5.0579e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01682207 6.1128e-01 insignificant 1.0000e+00 insignificant 0.792512 0.871287 -0.0695053 14 0.703249 0.783634 -0.0803856 9.9890e-01 2.0065e-07 weaklyHypometh 1.0000e+00 4.6320e-05 weaklyHypometh 9.9961e-01 5.8179e-06 weaklyHypometh 1.000000 1.4545e-03 weaklyHypometh -0.0561925 7.9902e-02 insignificant 1.0000000 insignificant 0.821192 0.784827 0.0396536 14 0.762033 0.749545 0.01248758 1.5178e-03 9.3028e-01 weaklyHypermeth 2.2321e-02 1.0000e+00 weaklyHypermeth 8.4303e-02 9.6032e-01 insignificant 9.8275e-01 1.0000e+00 insignificant 0.0282931 3.8336e-01 insignificant 1.0000e+00 insignificant 0.821014 0.871287 -0.03743956 14 0.750135 0.783634 -0.0334999 9.7280e-01 2.2107e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 7.3218e-01 5.3403e-02 insignificant 1.0000000 1.00000000 insignificant -0.0110773 6.8454e-01 insignificant 1.000000 insignificant 0.784686 0.871287 -0.0753033 15 0.737023 0.783634 -0.0466119 9.9998e-01 3.6889e-03 weaklyHypometh 1.0000e+00 5.7639e-02 weaklyHypometh 9.9648e-01 8.1693e-02 insignificant 1.000000 9.6096e-01 insignificant -0.0393704 3.1338e-01 insignificant 1.00000000 insignificant chr7 142821135 142822135 28761 EPHA1 ENSG00000146904 0.73246 456 13 0.744641 290 14 0.74215 255 13 0.794382 289 13 0.7167298 159 12 0.727819 426 14 0.769091 200 14 0.792911 217 11 0.714969 187 11 0.581831 183 11 0.729329 415 15 0.7437732 149 12 0.802620 263 14 0.623611 85 7 0.757180 172 13 0.6797586 118 12 0.685971 770 11 0.763469 316 14 0.8234673 209 12 0.797770 309 14 0.796710 142 10 0.8104609 114 12 0.819092 315 13 0.790235 111 7 0.747832 150 10 0.698005 415 14 0.771521 154 10 0.816723 94 8 0.7989081 202 13 0.828670 380 12 0.772351 353 11 0.735450 423 13 0.6641564 232 13 0.720884 186 13 0.712958 386 15 0.8833333 76 6 0.780846 164 12 0.738127 397 13 0.783561 355 13 0.852235 466 14 0.750604 361 15 0.725929 402 12 0.839255 403 15 0.791284 0.783834 0.723406 0.811384 0.7846078 0.809427 0.791537 0.8683687 0.7557762 0.745005 0.820595 0.746235 0.894688 0.72703 0.825792 0.7422143 0.806788 0.851372 0.849375 0.870970 0.868990 0.7771393 0.86181 0.855826 0.860654 0.824513 0.777079 0.852657 0.849629 0.835017 0.876635 0.796986 0.7189370 0.692805 0.799662 0.9302745 0.791153 0.838701 0.891026 0.887397 0.863335 0.857844 0.869429 7 0.785074 0.813530 -3.0929e-02 12 0.696995 0.752530 -0.0555350 0.99873639 0.0059485 weaklyHypometh 1.00000 0.59485 insignificant 0.9984603 0.00668228 weaklyHypometh 1 0.95461 insignificant -0.0459668 0.013434 weaklyHypometh 1 insignificant 0.785074 0.774306 0.0137720 13 0.696995 0.739270 -0.0422750 8.4320e-03 3.3577e-01 weaklyHypermeth 1.0673e-01 1.0000e+00 insignificant 5.9433e-01 5.2007e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01385442 6.9226e-01 insignificant 1.0000e+00 insignificant 0.785060 0.869653 -0.0701237 13 0.691573 0.773842 -0.0822683 9.9798e-01 2.3160e-07 weaklyHypometh 1.0000e+00 4.6320e-05 weaklyHypometh 9.9916e-01 8.6793e-06 weaklyHypometh 1.000000 1.7359e-03 weaklyHypometh -0.0541204 9.6027e-02 insignificant 1.0000000 insignificant 0.813530 0.774306 0.0422953 13 0.752530 0.739270 0.01325998 1.0612e-03 9.2815e-01 weaklyHypermeth 1.6079e-02 1.0000e+00 weaklyHypermeth 6.3759e-02 9.6658e-01 insignificant 8.1743e-01 1.0000e+00 insignificant 0.0321124 3.6316e-01 insignificant 1.0000e+00 insignificant 0.813333 0.869653 -0.03800279 13 0.739505 0.773842 -0.0343367 9.6171e-01 2.3263e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 6.6196e-01 6.9389e-02 insignificant 1.0000000 1.00000000 insignificant -0.0081535 7.7288e-01 insignificant 1.000000 insignificant 0.774149 0.869653 -0.0770054 14 0.725547 0.773842 -0.0482946 9.9996e-01 3.5469e-03 weaklyHypometh 1.0000e+00 5.7207e-02 weaklyHypometh 9.9432e-01 8.2642e-02 insignificant 1.000000 9.6096e-01 insignificant -0.0402660 3.3325e-01 insignificant 1.00000000 insignificant chr7 142834335 142835335 28763 EPHA1 ENSG00000146904 0.77730 417 12 0.680538 178 11 0.60686 145 12 0.822862 229 12 0.8178030 79 8 0.762992 402 12 0.729027 129 9 0.769140 135 8 0.677656 109 11 0.784722 83 5 0.787729 313 12 0.8290965 77 8 0.727232 159 12 0.852778 42 5 0.770519 172 12 0.6080357 63 8 0.763889 68 8 0.749739 285 12 0.6988381 167 11 0.675517 327 12 0.839331 49 5 0.8309307 137 12 0.732508 232 12 0.802706 81 6 0.867394 88 9 0.716237 248 12 0.815939 119 8 0.744841 60 9 0.7259824 130 12 0.692989 268 12 0.734947 245 12 0.722394 443 12 0.5827508 159 10 0.779080 158 12 0.746395 229 12 0.7556933 84 8 0.693204 107 7 0.721099 251 12 0.804494 333 12 0.705570 313 12 0.733764 216 12 0.812337 249 12 0.813522 308 12 0.820085 0.717332 0.669593 0.830820 0.7739045 0.791181 0.744062 0.8065827 0.6855730 0.796626 0.793394 0.840029 0.755906 0.80595 0.785671 0.7117273 0.730490 0.842327 0.741464 0.795260 0.770515 0.8604348 0.77981 0.793354 0.885891 0.769766 0.839043 0.792979 0.772845 0.744816 0.767694 0.746095 0.6586974 0.791217 0.674321 0.7150069 0.749961 0.727450 0.837608 0.835941 0.748644 0.834219 0.858527 4 0.768153 0.765714 5.2860e-03 12 0.754651 0.746245 0.0084059 0.54343012 0.8301064 insignificant 1.00000 1.00000 insignificant 0.9882933 0.09210533 insignificant 1 1.00000 insignificant -0.0242360 0.298359 insignificant 1 insignificant 0.768092 0.703441 0.0726448 12 0.767989 0.779668 -0.0116792 7.1904e-05 9.9849e-01 weaklyHypermeth 1.2397e-03 1.0000e+00 weaklyHypermeth 3.6319e-02 9.9165e-01 weaklyHypermeth 5.1154e-01 1.0000e+00 insignificant 0.03157681 3.6059e-01 insignificant 1.0000e+00 insignificant 0.768112 0.798450 -0.0388655 12 0.759277 0.702316 0.0569607 9.9587e-01 4.8633e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9835e-01 2.3215e-02 weaklyHypometh 1.000000 1.0000e+00 insignificant -0.0293238 3.1517e-01 insignificant 1.0000000 insignificant 0.765714 0.701629 0.0665415 12 0.746245 0.687864 0.05838182 6.1737e-06 9.9734e-01 weaklyHypermeth 1.3136e-04 1.0000e+00 weaklyHypermeth 1.3595e-04 9.9986e-01 weaklyHypermeth 4.2485e-03 1.0000e+00 weaklyHypermeth 0.0558129 1.2959e-01 insignificant 1.0000e+00 insignificant 0.765714 0.800000 -0.04466391 12 0.746245 0.794561 -0.0483161 9.9957e-01 4.2013e-03 weaklyHypometh 1.0000e+00 5.2516e-01 insignificant 9.7692e-01 9.6200e-02 insignificant 1.0000000 1.00000000 insignificant -0.0050877 8.6111e-01 insignificant 1.000000 insignificant 0.702840 0.798450 -0.1118184 12 0.750291 0.702316 0.0479750 1.0000e+00 3.8905e-06 weaklyHypometh 1.0000e+00 1.3895e-04 weaklyHypometh 9.9982e-01 1.5321e-03 weaklyHypometh 1.000000 4.6427e-02 weaklyHypometh -0.0609006 1.3071e-01 insignificant 1.00000000 insignificant chr7 142841735 142842735 28764 EPHA1 ENSG00000146904 0.83143 400 7 0.824288 279 7 0.74029 118 5 0.873418 332 7 1.0000000 8 0 0.865280 248 7 0.888889 11 0 0.916667 21 3 1.000000 15 2 1.000000 8 0 0.923501 171 3 1.0000000 2 0 1.000000 14 2 0.944444 13 2 0.850000 10 1 0.6666667 8 0 NA 0 0 0.817451 196 7 0.9166667 16 2 0.894913 236 7 0.933333 11 2 0.6666667 3 0 0.878438 122 4 0.678571 39 3 0.949247 85 3 0.854941 223 7 0.750000 19 2 0.750000 13 1 1.0000000 11 1 0.838220 256 7 0.855123 197 7 0.826408 287 7 0.4791194 186 7 0.166667 16 1 0.490842 137 7 0.4358974 28 2 0.101300 88 3 0.705112 247 7 0.885412 279 6 0.900474 372 6 0.895679 506 7 0.735964 162 6 0.891178 422 7 0.958256 0.943784 0.714286 0.946302 1.0000000 0.893407 0.952381 0.8928571 1.0000000 0.982508 0.923622 0.982508 1.000000 0.92857 0.807143 0.8571429 NA 0.864743 0.964286 0.955222 0.914286 0.5714286 0.98758 0.877551 0.969032 0.932530 1.000000 1.000000 1.000000 0.899315 0.899655 0.931800 0.2409297 0.142857 0.095238 0.2747253 0.092024 0.600698 0.934150 0.944011 0.951411 0.984556 0.887692 0 0.878802 0.864972 1.7937e-03 6 0.845287 0.849498 -0.0042111 0.24134154 0.4828641 insignificant 1.00000 1.00000 insignificant 0.2251304 0.30665772 insignificant 1 1.00000 insignificant 0.0605647 0.114831 lowCoverage 1 lowCoverage 0.878917 0.455840 0.4630904 6 0.864626 0.464754 0.3998726 7.9320e-26 9.9999e-01 hypermethylated 6.6100e-24 1.0000e+00 hypermethylated 3.2908e-08 1.0000e+00 hypermethylated 2.9916e-06 1.0000e+00 hypermethylated 0.49582072 2.4088e-03 lowCoverage 8.0292e-02 lowCoverage 0.878802 0.894888 -0.0170170 6 0.845287 0.874082 -0.0287948 8.5285e-01 2.6146e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.2605e-01 2.6039e-01 insignificant 1.000000 1.0000e+00 insignificant 0.0305691 4.4426e-01 lowCoverage 1.0000000 lowCoverage 0.864972 0.456491 0.4015033 7 0.849498 0.531147 0.31835121 7.7087e-20 1.0000e+00 hypermethylated 6.4240e-18 1.0000e+00 hypermethylated 9.0314e-07 1.0000e+00 hypermethylated 6.9472e-05 1.0000e+00 hypermethylated 0.4352560 3.9005e-03 lowCoverage 1.3002e-01 lowCoverage 0.864972 0.894888 -0.02373276 6 0.849498 0.874082 -0.0245836 9.4582e-01 1.4470e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.2872e-01 2.5807e-01 insignificant 1.0000000 1.00000000 insignificant -0.0299956 5.0564e-01 lowCoverage 1.000000 lowCoverage 0.456491 0.894888 -0.4526149 6 0.531147 0.874082 -0.3429348 1.0000e+00 8.5551e-12 hypomethylated 1.0000e+00 7.1293e-10 hypomethylated 1.0000e+00 2.1943e-06 hypomethylated 1.000000 3.1347e-04 hypomethylated -0.4652516 2.8247e-03 lowCoverage 0.09985559 lowCoverage chr7 143277935 143278935 28785 OR2F2 ENSG00000221910 0.72988 493 15 0.667372 193 14 0.62605 141 12 0.731904 288 14 0.6745732 190 12 0.717503 265 12 0.681156 162 13 0.758119 190 10 0.606952 135 10 0.713187 137 15 0.766295 358 14 0.6614720 143 8 0.748637 231 15 0.738515 132 11 0.681746 202 11 0.7925824 86 7 0.677944 637 9 0.680482 354 14 0.7750131 172 13 0.709484 205 11 0.667708 79 7 0.8771561 101 8 0.775242 221 15 0.678639 81 7 0.808240 90 5 0.744748 231 12 0.890952 92 11 0.671296 80 6 0.5913305 137 9 0.655797 231 14 0.742766 213 14 0.778877 302 12 0.6123054 177 15 0.700921 203 13 0.706019 284 13 0.6590136 48 6 0.694854 141 10 0.710362 267 14 0.738270 372 13 0.793398 347 14 0.779783 343 14 0.735980 251 12 0.767986 349 14 0.772185 0.688281 0.650418 0.737370 0.7138084 0.775479 0.652003 0.8038443 0.6845200 0.769436 0.726171 0.720655 0.783935 0.83170 0.738048 0.6930194 0.703352 0.762631 0.737090 0.811982 0.761655 0.8787090 0.70872 0.697252 0.754302 0.705508 0.853405 0.874417 0.631956 0.740840 0.727053 0.717980 0.6205679 0.725697 0.741248 0.7107718 0.714183 0.644189 0.721482 0.725548 0.791744 0.815941 0.765963 3 0.736037 0.755113 1.8920e-03 13 0.679671 0.739724 -0.0600526 0.58157682 0.6948750 insignificant 1.00000 1.00000 insignificant 0.9669023 0.18725483 insignificant 1 1.00000 insignificant -0.0332861 0.262821 insignificant 1 insignificant 0.736327 0.720536 0.0555144 13 0.715515 0.682676 0.0328390 7.8181e-05 8.6024e-01 weaklyHypermeth 1.3251e-03 1.0000e+00 weaklyHypermeth 2.5600e-03 9.4830e-01 weaklyHypermeth 5.2245e-02 1.0000e+00 weaklyHypermeth 0.02636423 1.9564e-01 insignificant 1.0000e+00 insignificant 0.736350 0.728640 -0.0197176 14 0.717431 0.771487 -0.0540565 9.5141e-01 2.1198e-02 weaklyHypometh 1.0000e+00 8.6508e-01 insignificant 9.8253e-01 7.0864e-03 weaklyHypometh 1.000000 5.0617e-01 insignificant -0.0561400 3.6676e-03 weaklyHypometh 0.2449655 insignificant 0.754870 0.720536 0.0529796 13 0.722175 0.682676 0.03949904 4.0475e-03 9.7723e-01 weaklyHypermeth 5.2565e-02 1.0000e+00 weaklyHypermeth 6.2328e-03 9.9968e-01 weaklyHypermeth 1.0564e-01 1.0000e+00 insignificant 0.0596503 6.9622e-02 insignificant 1.0000e+00 insignificant 0.754981 0.728640 -0.02288534 12 0.725264 0.771487 -0.0462232 9.6340e-01 3.4182e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.1509e-01 2.1614e-01 insignificant 1.0000000 1.00000000 insignificant -0.0228539 4.3944e-01 insignificant 1.000000 insignificant 0.720536 0.727657 -0.0767361 12 0.682676 0.758045 -0.0753694 9.8339e-01 1.6962e-05 weaklyHypometh 1.0000e+00 5.1400e-04 weaklyHypometh 9.9999e-01 1.7154e-04 weaklyHypometh 1.000000 9.0282e-03 weaklyHypometh -0.0825042 2.2306e-03 weaklyHypometh 0.08922538 weaklyHypometh chr7 148516735 148517735 28812 ZNF398 ENSG00000197024 0.59074 44 6 0.852381 28 2 0.61111 19 0 0.748090 54 4 0.3333333 6 0 0.856576 63 5 0.614815 23 2 0.925926 19 2 0.750000 17 0 0.933333 14 2 0.815424 63 5 0.6111111 11 0 1.000000 8 0 0.433333 10 1 1.000000 2 0 1.0000000 4 0 0.500000 5 0 0.663889 40 3 0.7517857 89 5 0.777441 36 4 0.750000 5 0 NA 0 0 0.690476 20 2 1.000000 4 0 0.125000 5 0 0.826330 102 8 0.958333 9 0 0.750000 3 0 0.7164502 23 2 0.691327 100 5 0.768827 96 5 0.787046 42 3 0.7603175 32 5 0.783333 15 2 0.891736 104 6 1.0000000 5 0 0.845238 13 2 0.678546 114 5 0.572222 42 4 0.686054 57 4 0.736111 52 4 0.561111 24 2 0.705994 72 7 0.333333 0.928571 1.000000 0.857143 0.5000000 0.916667 0.800000 0.7777778 0.5000000 0.800000 0.875000 0.666667 1.000000 0.00000 1.000000 1.0000000 NA 0.750000 0.928571 0.800000 0.500000 NA 0.50000 1.000000 NA 0.923077 0.750000 1.000000 0.727273 0.684211 0.833333 0.727273 0.8000000 0.600000 1.000000 NA 0.857143 0.920000 0.800000 0.666667 1.000000 1.000000 0.842105 0 0.744144 0.742647 -1.1572e-03 2 0.729177 0.759453 -0.0302763 0.63527250 0.5303335 lowCoverage 1.00000 1.00000 lowCoverage 0.5949166 0.55719684 lowCoverage 1 1.00000 lowCoverage 0.0053928 0.947307 lowCoverage 1 lowCoverage 0.744144 0.777385 -0.0356446 2 0.729177 0.765082 -0.0359052 6.3045e-01 3.0384e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 4.8901e-01 3.8726e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.08806397 1.8154e-01 lowCoverage 1.0000e+00 lowCoverage 0.744144 0.674797 0.0407080 2 0.729177 0.688019 0.0411576 2.9937e-01 9.4974e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 3.3240e-01 9.6379e-01 lowCoverage 1.000000 1.0000e+00 lowCoverage 0.0861659 1.4285e-01 lowCoverage 1.0000000 lowCoverage 0.742647 0.777385 -0.0112876 3 0.759453 0.765082 -0.00562890 6.6383e-01 4.2339e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.3276e-01 7.4139e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0934567 2.7226e-01 lowCoverage 1.0000e+00 lowCoverage 0.743276 0.672065 0.07956902 3 0.783508 0.619217 0.1642905 3.2401e-02 9.3119e-01 lowCoverage 9.8186e-01 1.0000e+00 lowCoverage 2.0123e-01 9.5054e-01 lowCoverage 1.0000000 1.00000000 lowCoverage 0.0807732 3.1185e-01 lowCoverage 1.000000 lowCoverage 0.777385 0.674797 0.0672532 5 0.765082 0.688019 0.0770628 1.3538e-02 8.5556e-01 weaklyHypermeth 9.6702e-01 1.0000e+00 insignificant 1.7816e-01 8.7113e-01 insignificant 1.000000 1.0000e+00 insignificant 0.1742299 1.5343e-02 lowCoverage 0.33353539 lowCoverage chr7 149597035 149598035 28826 ENSG00000204934 0.92914 373 14 0.735421 263 13 0.75407 293 14 0.922504 347 14 0.9079498 176 12 0.913039 524 14 0.860204 215 14 0.736743 285 14 0.880616 264 11 0.900992 298 14 0.860723 568 14 0.7615296 109 10 0.928448 267 13 0.859568 121 9 0.776240 222 14 0.9358974 54 3 0.810786 72 8 0.744412 282 11 0.9124402 440 13 0.806044 298 13 0.835310 144 14 0.8488756 163 12 0.833545 236 13 0.671342 143 10 0.894166 122 11 0.891278 300 14 0.778879 201 11 0.803671 113 10 0.8209370 283 13 0.912988 349 14 0.904833 360 14 0.891090 429 13 0.7032892 234 13 0.859343 306 13 0.746657 682 12 0.6479407 86 7 0.747123 194 12 0.744939 295 14 0.868212 334 14 0.914174 335 13 0.801599 327 13 0.842254 249 13 0.791591 246 12 0.921879 0.751341 0.722972 0.869012 0.8898754 0.900490 0.858986 0.8166344 0.9018208 0.884435 0.868510 0.822252 0.909926 0.83882 0.857896 0.8888868 0.803163 0.767177 0.907653 0.858344 0.917028 0.8517736 0.89522 0.774169 0.897238 0.921807 0.836852 0.898700 0.876633 0.897428 0.877011 0.870275 0.7472399 0.827148 0.777156 0.6408681 0.779642 0.654219 0.886722 0.886648 0.815459 0.813032 0.787174 9 0.860461 0.873239 -1.4730e-02 14 0.834649 0.791994 0.0426545 0.97402084 0.1701518 insignificant 1.00000 1.00000 insignificant 0.9846723 0.14497354 insignificant 1 1.00000 insignificant 0.0062617 0.809834 insignificant 1 insignificant 0.860486 0.785198 0.0807755 13 0.834649 0.762409 0.0722400 1.9147e-06 9.9980e-01 weaklyHypermeth 3.9889e-05 1.0000e+00 weaklyHypermeth 4.5310e-03 9.9912e-01 weaklyHypermeth 8.8843e-02 1.0000e+00 weaklyHypermeth 0.10528934 1.1203e-02 weaklyHypermeth 2.4897e-01 insignificant 0.861172 0.841504 0.0144420 13 0.868157 0.844560 0.0235975 1.4604e-01 7.3559e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.0901e-01 8.2661e-01 insignificant 1.000000 1.0000e+00 insignificant 0.0032720 9.0897e-01 insignificant 1.0000000 insignificant 0.873547 0.784958 0.0975422 13 0.841494 0.747559 0.09393462 2.0917e-05 1.0000e+00 weaklyHypermeth 4.3577e-04 1.0000e+00 weaklyHypermeth 5.6355e-04 1.0000e+00 weaklyHypermeth 1.4089e-02 1.0000e+00 weaklyHypermeth 0.0990276 1.6950e-02 weaklyHypermeth 3.8522e-01 insignificant 0.877168 0.841504 0.03060186 13 0.888070 0.844560 0.0435097 1.2543e-02 9.0466e-01 weaklyHypermeth 5.0173e-01 1.0000e+00 insignificant 2.2077e-02 9.6516e-01 weaklyHypermeth 1.0000000 1.00000000 insignificant -0.0029897 9.2228e-01 insignificant 1.000000 insignificant 0.788031 0.841504 -0.0690310 13 0.797397 0.844560 -0.0471634 9.8086e-01 2.0867e-02 weaklyHypometh 1.0000e+00 2.5664e-01 insignificant 9.6726e-01 4.1302e-02 weaklyHypometh 1.000000 5.7363e-01 insignificant -0.1020173 2.0322e-02 weaklyHypometh 0.37633533 insignificant chr7 149727035 149728035 28836 ZNF775 ENSG00000196456 0.87446 204 5 0.679143 419 5 0.76701 118 5 0.859221 109 5 0.7097794 111 5 0.840185 301 5 0.769678 133 5 0.612103 163 5 0.807692 104 2 0.832961 106 5 0.680700 287 5 0.7230769 53 5 0.513901 207 5 0.878042 97 5 0.794943 204 5 0.9061966 111 5 0.750000 4 0 0.953716 124 2 0.3724484 391 5 0.763195 222 5 0.528571 45 5 0.9022807 48 2 0.802830 100 5 0.944778 72 5 0.900000 20 2 0.897648 166 2 0.752251 183 5 0.547430 135 5 0.7684832 387 5 0.797408 361 5 0.773373 404 5 0.745556 265 5 0.7626111 143 5 0.817593 78 5 1.000000 4 0 1.0000000 2 0 0.743267 148 5 0.723480 464 5 0.683633 180 5 0.741863 151 5 0.734234 128 5 0.872736 94 2 0.856339 110 2 0.904255 0.594640 0.779654 0.924242 0.5744485 0.862802 0.806548 0.8029851 0.8076923 0.817063 0.844664 0.807692 0.711475 0.90939 0.827586 0.8055556 0.750000 0.884290 0.640244 0.774747 0.821429 0.9223684 0.95404 0.980000 0.900000 0.897648 0.881000 0.693043 0.925579 0.929907 0.829084 0.825532 0.9687500 0.981481 1.000000 1.0000000 0.979696 0.842647 0.880512 0.826087 0.918919 0.872736 0.856339 2 0.726039 0.790485 -7.2092e-02 5 0.754589 0.641433 0.1131561 0.99738142 0.0033403 weaklyHypometh 1.00000 0.55671 insignificant 0.5467826 0.03736149 weaklyHypometh 1 1.00000 insignificant -0.0256281 0.605004 lowCoverage 1 lowCoverage 0.726039 0.725864 -0.0169265 5 0.754589 0.763805 -0.0092157 1.1375e-01 6.4138e-04 weaklyHypometh 1.0000e+00 8.0173e-02 weaklyHypometh 3.0173e-01 1.4007e-04 weaklyHypometh 1.0000e+00 2.8015e-02 weaklyHypometh -0.08673577 1.8462e-01 lowCoverage 1.0000e+00 lowCoverage 0.725960 0.770739 -0.0378875 5 0.705507 0.719680 -0.0141739 8.0894e-01 9.3747e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 2.0397e-01 1.8354e-01 insignificant 1.000000 1.0000e+00 insignificant -0.0233384 6.3724e-01 lowCoverage 1.0000000 lowCoverage 0.790485 0.725864 0.0498375 5 0.641433 0.763805 -0.12237178 8.0127e-03 1.4800e-02 weaklyHypermeth 9.7716e-02 1.0000e+00 weaklyHypermeth 2.7613e-01 6.2683e-04 inconclusive 1.0000e+00 1.5671e-01 insignificant -0.0611077 3.6322e-01 lowCoverage 1.0000e+00 lowCoverage 0.790847 0.770739 0.03793426 5 0.769719 0.719680 0.0500388 1.0236e-01 9.5457e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.4186e-02 9.7426e-01 weaklyHypermeth 1.0000000 1.00000000 insignificant 0.0022897 9.6623e-01 lowCoverage 1.000000 lowCoverage 0.725537 0.770739 0.0093291 5 0.716565 0.719680 -0.0031150 1.4228e-03 4.0900e-01 weaklyHypermeth 2.3550e-01 1.0000e+00 insignificant 3.5002e-03 7.3438e-01 weaklyHypermeth 0.583369 1.0000e+00 insignificant 0.0633974 3.4633e-01 lowCoverage 1.00000000 lowCoverage chr7 149749035 149750035 28837 ZNF775 ENSG00000196456 0.77681 222 7 0.559241 137 5 0.44359 71 5 0.756556 190 7 0.6711111 93 7 0.886818 469 5 0.610269 45 5 0.650486 133 6 0.474635 79 7 0.542484 66 7 0.755993 209 6 0.4952381 33 4 0.842038 116 7 0.770860 83 7 0.538962 86 6 0.5277778 13 0 0.470588 52 3 0.520159 173 7 0.6621330 104 5 0.741754 328 5 0.601026 61 4 0.6571429 55 4 0.632128 128 7 0.647712 126 4 0.656250 46 3 0.556747 187 5 0.721413 137 4 0.707051 43 3 0.6404181 84 7 0.780832 191 6 0.466916 193 5 0.569086 410 5 0.4451930 118 7 0.518831 59 5 0.391728 235 7 0.7000000 16 0 0.652316 167 5 0.453580 175 5 0.735099 153 7 0.803224 202 7 0.828980 104 7 0.586331 145 3 0.748355 187 7 0.813046 0.712472 0.479830 0.841185 0.6996387 0.860374 0.678123 0.7503456 0.6562929 0.748944 0.866019 0.592257 0.849937 0.81157 0.670861 0.5467851 0.494577 0.648479 0.752138 0.886839 0.773149 0.8219512 0.67194 0.829071 0.735218 0.764503 0.796398 0.789185 0.664089 0.808477 0.764898 0.812417 0.5995273 0.511973 0.523785 0.6997286 0.604446 0.537694 0.788609 0.831727 0.862228 0.662777 0.784695 1 0.773131 0.797590 -4.4446e-03 5 0.663378 0.636228 0.0271502 0.49531905 0.6636893 insignificant 1.00000 1.00000 insignificant 0.7189594 0.65645326 insignificant 1 1.00000 insignificant -0.0015182 0.968753 lowCoverage 1 lowCoverage 0.775281 0.477922 0.2654998 5 0.692162 0.511759 0.1804025 5.6455e-14 9.4985e-01 hypermethylated 2.4546e-12 1.0000e+00 hypermethylated 8.7193e-05 6.2112e-01 hypermethylated 3.2294e-03 1.0000e+00 hypermethylated 0.10793403 9.9378e-02 lowCoverage 1.0000e+00 lowCoverage 0.775785 0.741772 -0.0244643 7 0.748132 0.822135 -0.0740026 9.9666e-01 5.9521e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9885e-01 1.8995e-01 insignificant 1.000000 1.0000e+00 insignificant -0.1055225 7.3685e-02 insignificant 1.0000000 insignificant 0.799514 0.477922 0.2830745 5 0.643713 0.511759 0.13195347 3.0021e-16 9.9507e-01 hypermethylated 1.8763e-14 1.0000e+00 hypermethylated 9.5109e-04 6.2587e-01 hypermethylated 2.2118e-02 1.0000e+00 hypermethylated 0.1094522 8.8383e-02 lowCoverage 1.0000e+00 lowCoverage 0.799031 0.742099 -0.01487729 5 0.607784 0.836957 -0.2291725 9.7478e-01 4.7117e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9599e-01 1.9193e-01 insignificant 1.0000000 1.00000000 insignificant -0.1040043 7.0709e-02 lowCoverage 1.000000 lowCoverage 0.477922 0.740458 -0.2633523 5 0.511759 0.782609 -0.2708502 9.9868e-01 2.6835e-10 hypomethylated 1.0000e+00 1.7890e-08 hypomethylated 9.9679e-01 1.8134e-03 weaklyHypometh 1.000000 5.3335e-02 weaklyHypometh -0.2134565 1.0072e-02 lowCoverage 0.25826046 lowCoverage chr7 150230535 150231535 28843 ABP1 ENSG00000002726 0.82731 176 7 0.690136 131 7 0.71907 90 6 0.819106 170 7 0.7779762 62 6 0.683238 265 7 0.672213 73 6 0.814213 165 7 0.836316 54 4 0.465018 50 5 0.834813 239 7 0.8541667 29 3 0.746181 77 6 0.773810 45 3 0.681973 65 6 0.7375000 27 3 1.000000 8 0 0.661958 139 6 0.7428728 129 6 0.827144 216 7 0.764739 36 3 0.7594017 53 5 0.805856 130 7 0.749876 71 5 0.850529 44 5 0.812737 182 7 0.663159 103 5 0.895833 29 2 0.7779702 123 6 0.761712 150 7 0.759563 154 7 0.759261 248 7 0.4837359 130 7 0.525018 108 7 0.604105 77 6 0.9000000 8 0 0.457163 156 7 0.616136 200 7 0.810465 169 7 0.786179 177 7 0.651234 172 7 0.769266 89 6 0.855164 179 7 0.844245 0.682866 0.714646 0.820402 0.7095982 0.764058 0.637870 0.7702298 0.7538033 0.704834 0.834951 0.976190 0.790873 0.74001 0.720663 0.7043155 0.981219 0.842306 0.708656 0.811923 0.712585 0.7618448 0.86490 0.734269 0.840136 0.810667 0.874675 0.872024 0.792715 0.727113 0.800552 0.787885 0.6237472 0.630084 0.692463 0.8207949 0.585768 0.736348 0.842127 0.843557 0.822877 0.918017 0.862231 1 0.795383 0.813162 -1.5110e-02 7 0.673578 0.748022 -0.0744440 0.98572031 0.4902287 insignificant 1.00000 1.00000 insignificant 0.9991003 0.46402663 insignificant 1 1.00000 insignificant -0.0218026 0.460327 insignificant 1 insignificant 0.796094 0.599411 0.1781902 7 0.759503 0.529936 0.2295668 2.5034e-11 1.0000e+00 weaklyHypermeth 8.0754e-10 1.0000e+00 weaklyHypermeth 1.0869e-04 9.9964e-01 weaklyHypermeth 3.7479e-03 1.0000e+00 weaklyHypermeth 0.16055753 5.9036e-02 insignificant 9.6780e-01 insignificant 0.795383 0.844784 -0.0519252 7 0.673578 0.706925 -0.0333478 8.7282e-01 7.5903e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 8.7760e-01 9.1679e-02 insignificant 1.000000 1.0000e+00 insignificant -0.0162114 7.0636e-01 insignificant 1.0000000 insignificant 0.813495 0.599411 0.1954915 7 0.778530 0.529936 0.24859400 1.2884e-09 1.0000e+00 weaklyHypermeth 4.0261e-08 1.0000e+00 weaklyHypermeth 9.0787e-05 9.9990e-01 weaklyHypermeth 3.0262e-03 1.0000e+00 weaklyHypermeth 0.1823601 3.8370e-02 weaklyHypermeth 7.1056e-01 insignificant 0.813777 0.844586 -0.03619795 7 0.822824 0.677618 0.1452058 9.2918e-01 2.1026e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.0511e-01 5.5096e-01 insignificant 1.0000000 1.00000000 insignificant 0.0055912 8.8747e-01 insignificant 1.000000 insignificant 0.599411 0.845466 -0.2489701 7 0.529936 0.722022 -0.1920867 1.0000e+00 4.5770e-07 hypomethylated 1.0000e+00 1.9900e-05 hypomethylated 9.9992e-01 6.9331e-04 hypomethylated 1.000000 2.4761e-02 hypomethylated -0.1767689 4.6619e-02 weaklyHypometh 0.72915420 insignificant chr7 150297935 150298935 28850 KCNH2 ENSG00000055118 0.83289 166 5 0.724515 205 5 0.64486 183 5 0.870174 160 5 0.6485714 88 5 0.787821 230 5 0.841495 121 5 0.820264 133 5 0.742518 88 5 0.828137 88 5 0.729732 197 5 0.8565657 62 5 0.571534 206 5 0.896992 96 5 0.697297 153 5 0.5500000 40 5 0.000000 2 0 0.758961 197 5 0.5279153 373 5 0.598274 180 5 0.637276 134 5 0.6270468 97 5 0.896693 164 5 0.573214 76 5 0.858611 79 5 0.752343 333 5 0.737182 229 5 0.645762 83 6 0.5133120 334 5 0.621243 271 5 0.644028 321 5 0.896372 247 5 0.7650877 194 5 0.661751 191 5 0.778289 146 5 0.8333333 14 0 0.794956 162 5 0.780208 327 5 0.797943 207 5 0.619084 207 5 0.602194 145 5 0.408916 192 5 0.718182 184 5 0.820218 0.664004 0.647523 0.850456 0.6480343 0.749381 0.847995 0.8115915 0.7605974 0.837722 0.875569 0.878524 0.484618 0.90140 0.711928 0.5290698 NA 0.753919 0.642053 0.596616 0.702819 0.6326414 0.86552 0.574829 0.853876 0.762808 0.734532 0.892317 0.608160 0.618969 0.650595 0.906025 0.7584532 0.649058 0.764524 0.8614341 0.766742 0.767095 0.762926 0.747379 0.603153 0.507504 0.732822 5 0.717318 0.719848 -2.7403e-03 5 0.740831 0.586579 0.1542514 0.82097707 0.8609301 insignificant 1.00000 1.00000 insignificant 0.6328253 0.91934731 insignificant 1 1.00000 insignificant -0.0038309 0.947506 lowCoverage 1 lowCoverage 0.717318 0.749516 -0.0312756 5 0.740831 0.776983 -0.0361525 2.3283e-01 5.9544e-03 weaklyHypometh 1.0000e+00 4.9620e-01 insignificant 8.2775e-01 1.8002e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.07251139 1.6189e-01 lowCoverage 1.0000e+00 lowCoverage 0.717127 0.685561 0.0403139 5 0.697636 0.616270 0.0813664 1.1877e-01 9.3430e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.5316e-02 9.9634e-01 weaklyHypermeth 1.000000 1.0000e+00 insignificant 0.0671623 4.2016e-01 lowCoverage 1.0000000 lowCoverage 0.719848 0.749516 -0.0300586 5 0.586579 0.776983 -0.19040396 4.7383e-01 6.1785e-03 weaklyHypometh 1.0000e+00 6.1785e-01 insignificant 9.1439e-01 2.8652e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0686805 1.3543e-01 lowCoverage 1.0000e+00 lowCoverage 0.720457 0.685561 0.03944467 5 0.684343 0.616270 0.0680731 1.3242e-01 8.8019e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.2736e-02 9.9158e-01 insignificant 1.0000000 1.00000000 insignificant 0.0709932 3.7753e-01 insignificant 1.000000 insignificant 0.749274 0.685561 0.0563769 5 0.739814 0.616270 0.1235444 3.9086e-03 8.8456e-01 weaklyHypermeth 3.7545e-01 1.0000e+00 insignificant 3.2068e-02 9.9527e-01 weaklyHypermeth 1.000000 1.0000e+00 insignificant 0.1396737 1.0059e-01 lowCoverage 1.00000000 lowCoverage chr7 150320935 150321935 28851 NOS3 ENSG00000164867 0.40765 52 6 0.387868 68 6 0.56775 70 6 0.580952 39 5 0.5396104 44 4 0.540265 79 6 0.800000 30 3 0.351714 58 6 0.554762 59 5 0.605906 49 5 0.665140 140 7 0.6653061 38 5 0.514394 67 4 NA 0 0 0.751111 45 4 0.5396825 38 4 0.355723 66 6 0.290000 23 1 0.3132625 110 7 0.421008 91 7 0.944444 31 3 0.2777778 23 3 0.763810 37 4 0.468889 30 4 0.833333 16 1 0.500383 70 6 0.524546 50 7 0.300000 14 2 0.4508206 64 7 0.596183 106 7 0.568070 72 4 0.889527 79 4 0.7906863 57 4 0.877841 36 4 0.535404 193 7 0.6142857 29 2 0.650000 39 5 0.966270 47 6 0.263889 44 6 0.369048 80 9 0.452381 29 3 0.694444 21 3 0.493651 32 4 0.661625 0.483333 0.772059 0.633053 0.7696078 0.591509 0.831373 0.3988005 0.9509804 0.841503 0.816506 0.943978 0.534165 NA 0.689107 0.9019608 0.441176 0.213725 0.324590 0.360703 0.901961 0.3529412 0.74370 0.300654 0.882353 0.586775 0.589978 0.627370 0.538876 0.611808 0.476432 0.739823 0.8656286 0.838012 0.820739 0.9019608 0.899510 0.976852 0.329657 0.471453 0.467320 0.565359 0.374790 0 0.456652 0.532095 8.5684e-05 4 0.524405 0.614030 -0.0896258 0.92793428 0.2758322 lowCoverage 1.00000 1.00000 lowCoverage 0.9850379 0.20644615 lowCoverage 1 1.00000 lowCoverage -0.0746165 0.312996 lowCoverage 1 lowCoverage 0.456652 0.730673 -0.2123695 5 0.524405 0.587360 -0.0629555 4.5297e-01 1.0559e-05 hypomethylated 1.0000e+00 2.6397e-03 hypomethylated 9.6319e-01 4.3777e-03 weaklyHypometh 1.0000e+00 4.3777e-01 insignificant -0.22054908 2.0660e-02 lowCoverage 4.3041e-01 lowCoverage 0.456652 0.407767 0.1444717 3 0.524405 0.487230 0.0371742 1.3920e-02 9.2220e-01 lowCoverage 6.9600e-01 1.0000e+00 lowCoverage 1.6846e-02 9.6214e-01 lowCoverage 0.935893 1.0000e+00 lowCoverage 0.0638496 4.5083e-01 lowCoverage 1.0000000 lowCoverage 0.532095 0.730673 -0.1818667 4 0.614030 0.587360 0.02667022 3.4206e-01 5.0106e-04 lowCoverage 1.0000e+00 1.0021e-01 lowCoverage 5.4237e-01 8.7895e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.1459325 1.4070e-01 lowCoverage 1.0000e+00 lowCoverage 0.532095 0.407767 0.15827990 3 0.614030 0.487230 0.1267999 1.5577e-03 9.9993e-01 lowCoverage 1.2981e-01 1.0000e+00 lowCoverage 3.0522e-03 1.0000e+00 lowCoverage 0.3815196 1.00000000 lowCoverage 0.1384661 1.7771e-01 lowCoverage 1.000000 lowCoverage 0.730673 0.407767 0.3631182 3 0.587360 0.487230 0.1001297 8.7415e-08 9.9939e-01 lowCoverage 4.3707e-05 1.0000e+00 lowCoverage 2.4442e-03 9.9996e-01 lowCoverage 0.583369 1.0000e+00 lowCoverage 0.2843987 1.8695e-02 lowCoverage 0.35951744 lowCoverage chr7 150358135 150359135 28855 ABCB8 ENSG00000197150 0.82706 61 4 0.573016 62 4 0.87593 43 3 0.864499 74 4 0.9500000 12 1 0.805896 91 5 0.579861 28 2 0.541353 34 1 0.877778 18 1 0.944444 10 1 0.484519 90 5 0.6166667 16 0 0.938095 19 2 1.000000 11 1 0.916667 10 0 1.0000000 3 0 1.000000 2 0 0.699015 101 6 0.6527778 27 2 0.842897 90 4 1.000000 12 1 0.8636364 37 3 0.739048 47 2 0.555102 38 5 0.903145 62 1 0.846230 69 4 0.750000 11 0 0.533333 12 0 0.5801587 58 5 0.905015 70 5 0.824324 65 2 0.837036 120 6 0.5761364 41 3 0.385714 21 1 0.669935 106 5 0.6562500 19 1 0.905714 28 2 0.741507 87 6 0.795547 70 5 0.910658 69 5 0.925000 45 2 0.735673 38 4 0.787500 76 4 0.996032 0.727513 0.935185 0.912892 0.9218696 0.930008 0.747354 0.8496241 0.9206349 0.960317 0.879070 0.726190 0.846939 0.99330 0.880952 0.9932982 0.993298 0.991342 0.940476 0.964524 1.000000 0.9591549 0.88571 0.820408 0.812818 0.934099 1.000000 0.996566 0.883220 0.950901 0.961390 0.943354 0.9857143 0.901361 0.878431 0.6881800 0.853741 0.636562 0.923315 0.971040 0.910714 0.954470 0.990476 0 0.780549 0.845258 -4.7920e-02 3 0.683781 0.745757 -0.0619758 0.97878741 0.0390849 lowCoverage 1.00000 1.00000 lowCoverage 0.9427515 0.21455060 lowCoverage 1 1.00000 lowCoverage 0.0214377 0.713321 lowCoverage 1 lowCoverage 0.780549 0.784768 0.0489497 3 0.683781 0.678280 0.0055010 3.8777e-01 4.5564e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 3.9069e-01 9.4340e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.14364731 1.1005e-01 lowCoverage 1.0000e+00 lowCoverage 0.780549 0.892617 -0.0827000 3 0.683781 0.756530 -0.0727484 7.9182e-01 4.4354e-03 lowCoverage 1.0000e+00 3.1402e-01 lowCoverage 9.4673e-01 1.2190e-01 lowCoverage 1.000000 1.0000e+00 lowCoverage -0.0313523 5.6384e-01 lowCoverage 1.0000000 lowCoverage 0.845258 0.784768 0.0900315 3 0.745757 0.678280 0.06747673 1.4360e-01 9.4869e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 1.7909e-01 9.4396e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.1222096 1.7464e-01 lowCoverage 1.0000e+00 lowCoverage 0.845258 0.892617 -0.04357764 5 0.745757 0.756530 -0.0107726 5.3018e-01 9.4063e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 8.3095e-01 4.4126e-01 insignificant 1.0000000 1.00000000 insignificant -0.0527900 3.7173e-01 lowCoverage 1.000000 lowCoverage 0.784768 0.892617 -0.1326527 3 0.678280 0.756530 -0.0782494 9.9944e-01 1.0452e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.8173e-01 1.1867e-01 lowCoverage 1.000000 1.0000e+00 lowCoverage -0.1749996 6.1859e-02 lowCoverage 0.90968566 lowCoverage chr7 150722035 150723035 28865 NUB1 ENSG00000013374 0.93459 459 13 0.841028 374 13 0.90297 248 12 0.909566 453 13 0.7991469 150 8 0.906974 586 13 0.721478 232 12 0.783901 231 11 0.671062 198 9 0.961819 229 8 0.845063 389 13 0.8861857 104 4 0.752884 188 8 0.697407 175 7 0.771291 185 7 0.8175325 116 5 0.931935 154 1 0.942738 563 10 0.9215861 397 12 0.964115 456 10 0.899138 127 11 0.8306314 129 7 0.947880 298 12 0.819829 100 9 0.943952 345 10 0.945914 445 13 0.790117 192 10 0.718289 104 6 0.9298216 422 12 0.956189 516 13 0.949224 446 13 0.946073 386 13 0.6219806 316 13 0.860002 330 12 0.833333 69 2 0.8116071 143 9 0.811248 240 11 0.900141 480 13 0.925956 361 12 0.920762 383 10 0.805610 325 10 0.937357 283 9 0.973355 324 11 0.910422 0.903792 0.876523 0.926775 0.9667321 0.952494 0.883626 0.8864332 0.8968032 0.946763 0.921217 0.902454 0.943437 0.86284 0.893879 0.8501323 0.898349 0.934313 0.936743 0.932621 0.890841 0.9017009 0.93495 0.938445 0.930837 0.935163 0.864218 0.913262 0.946685 0.947356 0.959292 0.943633 0.7129837 0.823346 0.905259 0.8542033 0.780167 0.923818 0.897264 0.929697 0.911890 0.960151 0.963589 3 0.915078 0.930180 -1.0897e-02 12 0.761622 0.788327 -0.0267053 0.99502959 0.0558848 insignificant 1.00000 1.00000 insignificant 0.7387680 0.24317029 insignificant 1 1.00000 insignificant -0.0415914 0.188902 insignificant 1 insignificant 0.916439 0.827302 0.0816485 12 0.806423 0.677495 0.1289282 3.0584e-14 9.9504e-01 weaklyHypermeth 1.3902e-12 1.0000e+00 weaklyHypermeth 7.6420e-04 9.9330e-01 weaklyHypermeth 1.9595e-02 1.0000e+00 weaklyHypermeth 0.04177807 3.7414e-01 insignificant 1.0000e+00 insignificant 0.919617 0.917015 0.0029516 10 0.913946 0.861294 0.0526518 8.1356e-01 5.8105e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.6522e-01 4.6140e-01 insignificant 1.000000 1.0000e+00 insignificant -0.0644445 9.8859e-02 insignificant 1.0000000 insignificant 0.930385 0.827192 0.0956033 13 0.824368 0.657338 0.16702969 5.0695e-11 9.9651e-01 weaklyHypermeth 1.8221e-09 1.0000e+00 weaklyHypermeth 6.4299e-05 9.9780e-01 weaklyHypermeth 2.3815e-03 1.0000e+00 weaklyHypermeth 0.0833695 1.0244e-01 insignificant 1.0000e+00 insignificant 0.931695 0.917563 0.01201043 10 0.924277 0.922815 0.0014623 1.6976e-01 6.0753e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.1498e-01 2.9146e-01 insignificant 1.0000000 1.00000000 insignificant -0.0228531 5.4561e-01 insignificant 1.000000 insignificant 0.828244 0.917563 -0.0885555 10 0.751244 0.922815 -0.1715717 9.9696e-01 2.4182e-05 weaklyHypometh 1.0000e+00 6.5357e-04 weaklyHypometh 9.9938e-01 4.8610e-03 weaklyHypometh 1.000000 9.9205e-02 weaklyHypometh -0.1062226 5.7333e-02 insignificant 0.85572099 insignificant chr7 150844935 150845935 28879 ENSG00000208268 0.86027 246 4 0.844570 260 9 0.52743 124 4 0.887978 122 8 0.9120879 113 8 0.859110 203 8 0.798246 120 8 0.880302 117 4 0.851535 114 4 0.878199 109 4 0.880277 248 8 0.7550310 71 4 0.783284 151 4 0.500000 4 0 0.832275 103 4 0.7957672 60 4 0.839594 205 8 0.599107 107 4 0.9489423 108 4 0.753438 201 4 0.925000 28 2 0.8832721 72 4 0.921273 109 4 0.792008 100 8 0.875682 103 8 0.876756 281 8 0.848992 113 5 0.660031 55 4 0.9387566 137 4 0.929666 258 8 0.871563 252 8 0.833894 244 4 0.8165460 187 8 0.866048 112 4 0.829615 92 6 0.9015152 50 4 0.901966 97 8 0.882958 219 8 0.936907 137 4 0.930847 227 8 0.914095 208 8 0.863579 218 4 0.818024 292 8 0.827791 0.853675 0.649692 0.815208 0.8690357 0.835684 0.836827 0.8337406 0.7149265 0.881497 0.814126 0.787862 0.819571 0.81600 0.888940 0.8042672 0.754896 0.800542 0.913520 0.821479 0.936072 0.7965495 0.85348 0.762322 0.785698 0.833220 0.775485 0.801299 0.879819 0.884765 0.862615 0.823244 0.8345217 0.727822 0.722742 0.8313000 0.839633 0.846541 0.895903 0.884590 0.882560 0.876405 0.785966 4 0.833513 0.843607 -1.1206e-02 8 0.838422 0.859748 -0.0213267 0.80200459 0.3394009 insignificant 1.00000 1.00000 insignificant 0.7474757 0.33785947 insignificant 1 1.00000 insignificant -0.0637026 0.081278 insignificant 1 insignificant 0.833513 0.834875 -0.0036354 8 0.838422 0.843584 -0.0051626 7.8562e-01 4.1213e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.6117e-01 1.8756e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.06706938 4.1602e-02 weaklyHypometh 7.1728e-01 insignificant 0.833513 0.875231 -0.0304583 8 0.838422 0.897222 -0.0588001 9.6739e-01 9.7873e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4649e-01 1.8703e-01 insignificant 1.000000 1.0000e+00 insignificant -0.0933187 1.7958e-02 weaklyHypometh 0.7334369 insignificant 0.843607 0.834875 0.0053676 8 0.859748 0.843584 0.01616410 7.6199e-01 1.4763e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4717e-01 2.6257e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0033668 9.0150e-01 insignificant 1.0000e+00 insignificant 0.843607 0.875231 -0.01947750 8 0.859748 0.897222 -0.0374734 8.5112e-01 2.5161e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.5689e-01 4.7475e-01 insignificant 1.0000000 1.00000000 insignificant -0.0296161 3.7073e-01 insignificant 1.000000 insignificant 0.834875 0.875231 -0.0242610 8 0.843584 0.897222 -0.0536375 1.1725e-02 3.2802e-01 inconclusive 9.0191e-01 1.0000e+00 insignificant 3.2649e-01 4.2574e-01 insignificant 1.000000 1.0000e+00 insignificant -0.0262493 3.6467e-01 insignificant 1.00000000 insignificant chr7 151015735 151016735 28885 RHEB ENSG00000106615 0.91167 266 7 0.659116 125 7 0.71852 121 7 0.861677 271 7 0.7120301 97 7 0.871513 337 7 0.887626 96 7 0.836735 93 7 0.929870 73 7 0.904762 49 7 0.789401 209 7 0.8968254 41 3 0.721429 32 4 0.933333 30 3 0.833333 89 7 1.0000000 20 0 NA 0 0 0.898138 275 7 0.8332501 117 7 0.885668 154 7 0.954167 42 7 0.9285714 67 7 0.923141 128 7 0.852041 61 6 0.840046 333 7 0.823529 147 7 0.793651 37 3 0.875000 43 3 0.8988095 95 7 0.816273 168 7 0.841153 160 7 0.849951 145 7 0.8522166 123 7 0.959828 169 7 1.000000 30 3 0.9652357 299 7 0.953297 114 7 0.831545 261 7 0.849718 261 7 0.924266 173 7 0.767308 212 7 0.894284 194 7 0.878746 224 7 0.907957 0.635478 0.764369 0.888870 0.7665556 0.879164 0.859609 0.8842676 0.9410817 0.932489 0.819795 0.880626 0.726582 0.93924 0.881857 1.0000000 NA 0.904459 0.827712 0.898233 0.945992 0.9493671 0.93486 0.815552 0.860957 0.852569 0.842475 0.898734 0.917194 0.839578 0.853645 0.869420 0.8319510 0.968570 0.956886 0.9735803 0.954236 0.869047 0.873851 0.946315 0.814833 0.908509 0.909108 3 0.859551 0.863158 -1.1962e-02 7 0.863204 0.873628 -0.0104234 0.94531649 0.4777432 insignificant 1.00000 1.00000 insignificant 0.9953233 0.29538555 insignificant 1 1.00000 insignificant -0.0197875 0.436252 insignificant 1 insignificant 0.859381 0.917671 -0.0663113 7 0.843662 0.913206 -0.0695440 9.9934e-01 5.4181e-04 weaklyHypometh 1.0000e+00 7.7401e-02 weaklyHypometh 9.9971e-01 3.3265e-03 weaklyHypometh 1.0000e+00 3.6961e-01 insignificant -0.08044667 4.0158e-02 weaklyHypometh 7.0453e-01 insignificant 0.859381 0.880639 -0.0256115 7 0.843662 0.861940 -0.0182781 9.2045e-01 1.5303e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.2805e-01 3.3805e-01 insignificant 1.000000 1.0000e+00 insignificant -0.0162907 6.4002e-01 insignificant 1.0000000 insignificant 0.862966 0.917671 -0.0559178 7 0.855574 0.913206 -0.05763151 9.9830e-01 2.6519e-03 weaklyHypometh 1.0000e+00 3.4083e-01 insignificant 9.9617e-01 5.1979e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0606592 9.0078e-02 insignificant 1.0000e+00 insignificant 0.862966 0.880639 -0.00965503 7 0.855574 0.861940 -0.0063656 7.6185e-01 3.6693e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.0479e-01 8.7816e-01 insignificant 1.0000000 1.00000000 insignificant 0.0034968 9.1186e-01 insignificant 1.000000 insignificant 0.917671 0.880639 0.0467451 7 0.913206 0.861940 0.0512659 4.6282e-02 9.9421e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 5.8447e-02 9.9858e-01 insignificant 1.000000 1.0000e+00 insignificant 0.0641560 1.3117e-01 insignificant 1.00000000 insignificant chr7 151023235 151024235 28886 RHEB ENSG00000106615 0.76544 359 9 0.657872 353 9 0.61521 212 9 0.622578 318 9 0.7584420 97 6 0.807827 542 9 0.819624 146 7 0.730284 162 8 0.748030 183 8 0.845875 163 7 0.812861 420 10 0.6636215 139 6 0.415231 270 8 0.750000 4 0 0.653573 155 7 0.5686741 79 6 0.505775 102 7 0.670978 337 9 0.7034705 247 8 0.655332 317 9 0.758398 139 8 0.4600390 122 6 0.844983 217 9 0.881606 137 9 0.778644 90 8 0.718881 328 10 0.649375 169 8 0.827465 72 7 0.7531556 170 9 0.612242 365 10 0.612756 349 9 0.845784 381 9 0.7914314 287 9 0.612195 245 9 0.857143 103 5 0.8632981 107 7 0.857485 177 10 0.722872 317 9 0.587743 370 9 0.673104 331 9 0.669064 320 8 0.656746 275 8 0.554962 401 8 0.758799 0.648457 0.518945 0.644949 0.6870793 0.807327 0.718178 0.6517508 0.6886194 0.789650 0.783906 0.712834 0.406766 0.63546 0.661201 0.4739530 0.494556 0.618539 0.585209 0.628686 0.831782 0.3669607 0.82217 0.820561 0.762025 0.607617 0.675805 0.779259 0.662569 0.532321 0.461177 0.810465 0.7481870 0.633611 0.948888 0.7498615 0.851708 0.652097 0.445011 0.672141 0.559466 0.560426 0.477709 5 0.678540 0.677432 4.3385e-03 9 0.658887 0.720801 -0.0619145 0.75855159 0.6173684 insignificant 1.00000 1.00000 insignificant 0.9881630 0.32253552 insignificant 1 1.00000 insignificant -0.0400758 0.366769 insignificant 1 insignificant 0.678688 0.774272 -0.0865439 9 0.718786 0.729933 -0.0111475 9.4997e-01 2.3525e-04 weaklyHypometh 1.0000e+00 3.9209e-02 weaklyHypometh 9.7327e-01 7.6167e-05 weaklyHypometh 1.0000e+00 2.3832e-02 weaklyHypometh -0.09553598 7.6672e-02 insignificant 1.0000e+00 insignificant 0.678696 0.593400 0.1146793 9 0.723997 0.607242 0.1167555 1.0808e-04 9.9185e-01 weaklyHypermeth 1.0808e-02 1.0000e+00 weaklyHypermeth 4.5723e-03 9.9629e-01 weaklyHypermeth 0.326593 1.0000e+00 insignificant 0.0602111 1.0154e-01 insignificant 1.0000000 insignificant 0.677572 0.774272 -0.0868970 9 0.740874 0.729933 0.01094102 9.9956e-01 3.3388e-04 weaklyHypometh 1.0000e+00 8.3471e-02 weaklyHypometh 9.8046e-01 1.2258e-03 weaklyHypometh 1.0000e+00 2.4517e-01 insignificant -0.0554602 3.2805e-01 insignificant 1.0000e+00 insignificant 0.677318 0.593400 0.11163777 9 0.714962 0.607242 0.1077195 2.4611e-03 9.7562e-01 weaklyHypermeth 1.6407e-01 1.0000e+00 insignificant 9.4831e-03 9.9457e-01 weaklyHypermeth 0.6773658 1.00000000 insignificant 0.1002869 3.4726e-02 weaklyHypermeth 1.000000 insignificant 0.774899 0.593400 0.1637800 9 0.802926 0.607242 0.1956844 2.3638e-07 9.9998e-01 weaklyHypermeth 7.8795e-05 1.0000e+00 weaklyHypermeth 1.0924e-05 9.9988e-01 weaklyHypermeth 0.010924 1.0000e+00 weaklyHypermeth 0.1557471 1.1447e-02 weaklyHypermeth 0.27706681 insignificant chr7 151082335 151083335 28890 RHEB ENSG00000106615 0.70440 202 6 0.566585 119 5 0.75020 133 5 0.780275 66 6 0.9567251 58 5 0.927951 192 5 0.679401 125 5 0.749748 121 5 0.652169 108 5 0.781929 98 5 0.814304 153 5 0.7262478 102 5 0.695580 180 5 NA 0 0 0.749728 131 5 0.6992308 38 4 0.620505 61 5 0.682305 72 6 0.6760128 112 5 0.632627 201 5 0.707619 48 4 0.6450505 42 5 0.835622 130 5 0.742857 21 3 0.795238 38 5 0.633777 144 5 0.708877 51 5 0.531313 33 3 0.8860624 128 5 0.621963 158 5 0.744042 142 5 0.559633 258 5 0.1804916 175 5 0.057112 127 5 0.000000 36 3 0.5750000 52 5 0.504444 62 5 0.443197 255 6 0.880256 174 6 0.877963 174 6 0.820885 130 6 0.842411 172 5 0.861154 75 6 0.807178 0.570472 0.750526 0.884246 0.9537480 0.904229 0.716711 0.7477868 0.6728912 0.792460 0.857646 0.708066 0.689288 NA 0.754851 0.7990333 0.649422 0.816744 0.677274 0.765670 0.689840 0.6741101 0.85457 0.796028 0.747899 0.756074 0.763229 0.505969 0.892959 0.692002 0.890320 0.694406 0.1488322 0.057572 0.133718 0.5071301 0.392157 0.473892 0.935085 0.974747 0.895694 0.941307 0.969920 3 0.755282 0.759430 -2.2173e-03 5 0.683735 0.649902 0.0338331 0.33200831 0.7217643 insignificant 1.00000 1.00000 insignificant 0.2865518 0.55819106 insignificant 1 1.00000 insignificant 0.0277284 0.475906 lowCoverage 1 lowCoverage 0.755282 0.350778 0.4168473 5 0.683735 0.275770 0.4079655 4.3694e-23 1.0000e+00 hypermethylated 2.9129e-21 1.0000e+00 hypermethylated 1.4810e-07 9.9579e-01 hypermethylated 1.0579e-05 1.0000e+00 hypermethylated 0.43535868 6.5850e-03 lowCoverage 1.6885e-01 lowCoverage 0.755282 0.900690 -0.1783910 5 0.683735 0.859921 -0.1761856 1.0000e+00 3.8535e-10 weaklyHypometh 1.0000e+00 1.9268e-07 weaklyHypometh 1.0000e+00 3.1449e-09 weaklyHypometh 1.000000 3.1449e-06 weaklyHypometh -0.1278010 3.8350e-05 lowCoverage 0.0127834 lowCoverage 0.759430 0.350778 0.4069332 5 0.649902 0.275770 0.37413242 1.5440e-13 9.9999e-01 hypermethylated 7.0184e-12 1.0000e+00 hypermethylated 1.2710e-06 9.9662e-01 hypermethylated 9.0785e-05 1.0000e+00 hypermethylated 0.4076303 8.1452e-03 lowCoverage 2.1435e-01 lowCoverage 0.759430 0.900690 -0.18035840 5 0.649902 0.859921 -0.2100187 1.0000e+00 2.3930e-09 weaklyHypometh 1.0000e+00 1.1965e-06 weaklyHypometh 1.0000e+00 5.6167e-07 weaklyHypometh 1.0000000 0.00056167 weaklyHypometh -0.1555294 3.7782e-04 lowCoverage 0.094455 lowCoverage 0.350778 0.900690 -0.6062118 5 0.275770 0.859921 -0.5841511 1.0000e+00 1.1332e-16 hypomethylated 1.0000e+00 2.2664e-14 hypomethylated 1.0000e+00 2.9238e-07 hypomethylated 1.000000 4.8730e-05 hypomethylated -0.5631597 2.3401e-03 lowCoverage 0.09000240 lowCoverage chr7 151124635 151125635 28891 RHEB ENSG00000106615 0.87329 276 9 0.851728 132 8 0.51108 250 11 0.951371 297 11 0.8039683 87 6 0.850137 370 12 0.839872 164 10 0.781502 137 9 0.788545 258 11 0.935148 198 9 0.909094 207 11 0.7939977 120 9 0.719911 232 11 0.906755 149 10 0.913635 194 9 0.8920565 96 9 0.803030 57 5 0.734640 350 11 0.8129884 111 11 0.841655 184 9 0.783550 52 5 0.7256361 182 11 0.840825 184 7 0.645711 108 9 0.907191 151 9 0.862857 152 8 0.718790 155 9 0.850285 154 11 0.6723016 125 11 0.845710 199 11 0.798410 156 8 0.905666 219 11 0.1948794 158 11 0.281939 89 11 0.328425 98 8 0.1744048 139 9 0.128515 171 11 0.084116 209 12 0.799816 232 9 0.707227 173 11 0.761967 142 11 0.758084 215 11 0.795045 224 11 0.890749 0.841504 0.552673 0.956754 0.8038884 0.863966 0.818384 0.8213933 0.8028204 0.944213 0.926339 0.858823 0.775399 0.89930 0.909937 0.8612013 0.868033 0.852217 0.840938 0.893959 0.863116 0.7853943 0.88310 0.780956 0.907148 0.886992 0.766045 0.848645 0.774284 0.877922 0.801664 0.918871 0.2805213 0.228251 0.351722 0.3678501 0.123610 0.056521 0.867799 0.834242 0.807738 0.829379 0.837314 6 0.850272 0.839256 1.0601e-02 11 0.824453 0.797832 0.0266214 0.22595618 0.6614331 insignificant 1.00000 1.00000 insignificant 0.2054107 0.80130308 insignificant 1 1.00000 insignificant 0.0293090 0.390053 insignificant 1 insignificant 0.850078 0.165485 0.6493980 11 0.772370 0.130763 0.6416067 2.6740e-74 1.0000e+00 hypermethylated 1.3370e-71 1.0000e+00 hypermethylated 2.1719e-20 1.0000e+00 hypermethylated 1.0860e-17 1.0000e+00 hypermethylated 0.62700693 2.2990e-07 hypermethylated 1.9158e-05 hypermethylated 0.850479 0.809331 0.0330716 11 0.846994 0.770480 0.0765142 3.8041e-04 8.9207e-01 weaklyHypermeth 3.1701e-02 1.0000e+00 weaklyHypermeth 1.1785e-02 9.4754e-01 weaklyHypermeth 0.763894 1.0000e+00 insignificant 0.0612923 3.8181e-02 weaklyHypermeth 1.0000000 insignificant 0.839803 0.166860 0.6351012 11 0.829082 0.144652 0.68442968 3.5434e-52 1.0000e+00 hypermethylated 1.1811e-49 1.0000e+00 hypermethylated 2.7385e-16 1.0000e+00 hypermethylated 1.3693e-13 1.0000e+00 hypermethylated 0.5976980 1.6683e-07 hypermethylated 1.6683e-05 hypermethylated 0.840285 0.809331 0.02276501 11 0.833236 0.770480 0.0627564 1.5485e-02 6.3767e-01 weaklyHypermeth 5.7350e-01 1.0000e+00 insignificant 2.1473e-01 8.9559e-01 insignificant 1.0000000 1.00000000 insignificant 0.0319834 3.0875e-01 insignificant 1.000000 insignificant 0.165877 0.809331 -0.5909718 11 0.149443 0.770480 -0.6210362 1.0000e+00 8.5413e-32 hypomethylated 1.0000e+00 4.2706e-29 hypomethylated 1.0000e+00 2.9296e-12 hypomethylated 1.000000 1.4648e-09 hypomethylated -0.5657146 3.1831e-06 hypomethylated 0.00079577 hypomethylated chr7 151136635 151137635 28892 RHEB ENSG00000106615 0.94361 525 12 0.884294 394 12 0.88593 292 12 0.934417 451 9 0.8948358 193 10 0.945410 601 12 0.857996 179 12 0.916098 400 12 0.943601 249 9 0.960624 239 12 0.904934 466 12 0.9061170 108 9 0.793330 439 9 0.983041 118 6 0.928838 291 9 0.9382716 72 6 0.911905 19 2 0.946280 445 11 0.9506212 418 12 0.846074 449 12 0.886206 131 12 0.7985043 234 12 0.896837 294 12 0.830557 170 9 0.960453 123 9 0.952170 592 12 0.848469 409 12 0.834035 145 10 0.8841095 467 12 0.951735 605 12 0.868657 469 12 0.948987 595 12 0.8822044 310 12 0.946113 357 12 0.967654 443 10 0.8873016 105 8 0.848498 186 9 0.961079 640 12 0.943931 398 9 0.956601 513 9 0.910184 418 9 0.940477 472 9 0.935801 379 9 0.919521 0.873053 0.841729 0.901934 0.9459206 0.926612 0.906031 0.8806460 0.9103867 0.945134 0.877253 0.865884 0.854107 0.95842 0.925512 0.9099415 0.905903 0.919956 0.942518 0.848062 0.858050 0.8385977 0.91867 0.847425 0.942162 0.929267 0.911384 0.921195 0.918507 0.921257 0.839160 0.936640 0.8677817 0.955427 0.968525 0.8706456 0.883757 0.963418 0.902961 0.930027 0.923843 0.909822 0.912019 9 0.897448 0.914914 -1.2249e-02 12 0.844501 0.832553 0.0119474 0.79832359 0.3731417 insignificant 1.00000 1.00000 insignificant 0.5178038 0.93755729 insignificant 1 1.00000 insignificant 0.0254180 0.191199 insignificant 1 insignificant 0.897933 0.944608 -0.0365061 12 0.916737 0.932738 -0.0160005 9.1958e-01 9.2614e-03 weaklyHypometh 1.0000e+00 6.6153e-01 insignificant 6.8578e-01 1.2832e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00166343 9.4282e-01 insignificant 1.0000e+00 insignificant 0.897808 0.906379 -0.0204499 9 0.884680 0.942053 -0.0573724 9.9606e-01 1.5169e-02 weaklyHypometh 1.0000e+00 6.8949e-01 insignificant 8.9778e-01 2.4314e-01 insignificant 1.000000 1.0000e+00 insignificant -0.0235875 7.6439e-02 insignificant 1.0000000 insignificant 0.915740 0.944635 -0.0234026 12 0.902946 0.937912 -0.03496541 9.4090e-01 8.4555e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7035e-01 8.6885e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0270815 3.1304e-01 insignificant 1.0000e+00 insignificant 0.915110 0.906422 -0.00955624 9 0.856307 0.946192 -0.0898847 9.7699e-01 3.7228e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.8584e-01 7.2463e-02 insignificant 1.0000000 1.00000000 insignificant -0.0490055 1.4411e-02 weaklyHypometh 0.762803 insignificant 0.944635 0.906379 0.0166315 9 0.937912 0.942053 -0.0041412 4.1450e-01 6.7897e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.6760e-01 7.5110e-01 insignificant 1.000000 1.0000e+00 insignificant -0.0219240 3.4507e-01 insignificant 1.00000000 insignificant chr7 152168535 152169535 28912 ACTR3B ENSG00000133627 0.86528 510 16 0.753083 347 16 0.83892 349 14 0.879770 291 15 0.9076048 215 14 0.886540 537 16 0.874650 247 16 0.877478 403 16 0.859783 188 14 0.927487 191 14 0.853768 578 16 0.7787570 127 11 0.857909 307 14 0.948485 50 5 0.886368 263 14 0.7950216 41 4 0.730220 51 6 0.850784 315 15 0.9109692 501 15 0.806321 387 15 0.953008 127 14 0.8572562 93 9 0.839293 305 15 0.685686 145 11 0.899039 101 13 0.882867 524 16 0.882244 161 14 0.872917 54 4 0.7610885 345 10 0.919320 545 18 0.910338 394 16 0.912401 548 16 0.7382986 389 15 0.918414 313 15 0.792906 649 9 0.6412608 101 9 0.764664 131 10 0.886847 492 16 0.809856 357 16 0.881972 444 15 0.838114 405 15 0.890292 346 13 0.865106 337 16 0.877613 0.737872 0.823943 0.906370 0.8875410 0.882685 0.866470 0.8468431 0.8736657 0.920974 0.843584 0.741607 0.790742 0.87308 0.886161 0.7897430 0.729660 0.849441 0.901390 0.891227 0.930956 0.8591335 0.88573 0.721414 0.889989 0.912584 0.847853 0.814098 0.762817 0.895527 0.882223 0.906176 0.7867386 0.879756 0.770805 0.7196093 0.765196 0.882509 0.856086 0.874019 0.869050 0.880125 0.866690 1 0.859274 0.885099 -2.4764e-02 14 0.829556 0.845182 -0.0156258 0.99992554 0.0210090 weaklyHypometh 1.00000 0.84036 insignificant 0.9992972 0.06741327 insignificant 1 1.00000 insignificant -0.0101615 0.687885 insignificant 1 insignificant 0.859420 0.825060 0.0265234 13 0.871034 0.862958 0.0080763 6.7422e-02 6.2130e-01 insignificant 6.5459e-01 1.0000e+00 insignificant 1.7846e-02 9.8183e-01 weaklyHypermeth 2.8328e-01 1.0000e+00 insignificant 0.06406144 1.8943e-01 insignificant 1.0000e+00 insignificant 0.859396 0.862288 -0.0088903 13 0.864246 0.865991 -0.0017444 5.4704e-01 9.8578e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 2.9993e-01 2.2835e-01 insignificant 1.000000 1.0000e+00 insignificant -0.0026083 8.9611e-01 insignificant 1.0000000 insignificant 0.885364 0.825060 0.0542097 15 0.887441 0.862958 0.02448335 3.6921e-03 9.8498e-01 weaklyHypermeth 4.9228e-02 1.0000e+00 weaklyHypermeth 1.4798e-03 9.9974e-01 weaklyHypermeth 3.0828e-02 1.0000e+00 weaklyHypermeth 0.0742230 1.5070e-01 insignificant 1.0000e+00 insignificant 0.885261 0.862288 0.01870946 15 0.881517 0.865991 0.0155262 1.7858e-03 7.1204e-01 weaklyHypermeth 1.3737e-01 1.0000e+00 insignificant 1.3619e-02 9.1816e-01 weaklyHypermeth 0.8512152 1.00000000 insignificant 0.0075532 7.7567e-01 insignificant 1.000000 insignificant 0.824976 0.862288 -0.0379438 15 0.855745 0.865991 -0.0102458 9.3400e-01 3.3184e-03 weaklyHypometh 1.0000e+00 5.5307e-02 weaklyHypometh 9.9993e-01 1.8686e-02 weaklyHypometh 1.000000 3.0633e-01 insignificant -0.0666697 1.7802e-01 insignificant 1.00000000 insignificant chr7 154621035 154622035 28924 ENSG00000217825 0.93010 230 5 0.886529 109 4 0.88503 130 4 0.926711 254 5 0.8666667 25 3 0.776872 334 5 0.856250 66 4 0.837094 91 4 0.936905 48 2 0.763881 96 4 0.906364 120 4 1.0000000 39 4 0.975068 109 4 NA 0 0 1.000000 61 4 0.6136364 17 1 0.848958 43 3 0.933921 262 4 0.9615385 68 5 0.865217 246 4 0.885417 49 4 0.8825835 116 4 0.916477 182 4 0.913678 61 4 0.961905 80 4 0.946500 178 4 0.820696 95 4 0.947917 36 3 0.8837366 82 4 0.982257 164 5 0.963184 121 5 0.951294 276 5 0.7731481 138 4 0.947880 90 4 1.000000 24 2 0.8601486 130 5 0.905702 83 4 0.769869 211 5 0.918544 312 5 0.935789 253 5 0.854846 236 5 0.900433 258 5 0.929013 297 5 0.923291 0.909759 0.891594 0.883196 0.9065030 0.918273 0.868902 0.8460907 0.9467286 0.970898 0.923118 1.000000 0.974788 NA 1.000000 0.6008869 0.835366 0.921989 0.952887 0.921902 0.899051 0.8692132 0.90503 0.919188 0.944019 0.939312 0.834864 0.924458 0.916601 0.977416 0.947407 0.942565 0.8327311 0.951506 0.926545 0.8455157 0.917297 0.743962 0.955726 0.933361 0.841716 0.929012 0.938244 3 0.918942 0.925591 -8.4536e-03 4 0.921542 0.930272 -0.0087303 0.81341039 0.3998996 lowCoverage 1.00000 1.00000 lowCoverage 0.7183300 0.27739213 lowCoverage 1 1.00000 lowCoverage -0.0386332 0.135786 lowCoverage 1 lowCoverage 0.918942 0.829882 0.0909780 4 0.921542 0.832983 0.0885593 4.1808e-04 9.9991e-01 lowCoverage 6.6362e-03 1.0000e+00 lowCoverage 1.5773e-01 9.9093e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.00654591 8.8428e-01 lowCoverage 1.0000e+00 lowCoverage 0.918942 0.919617 -0.0026394 4 0.921542 0.909456 0.0120864 2.9250e-01 7.3222e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 3.4890e-01 9.1014e-01 lowCoverage 1.000000 1.0000e+00 lowCoverage -0.0250545 3.4238e-01 lowCoverage 1.0000000 lowCoverage 0.925591 0.829882 0.0988394 4 0.930272 0.832983 0.09728962 1.1590e-04 9.9834e-01 lowCoverage 2.1425e-03 1.0000e+00 lowCoverage 2.9772e-02 9.8988e-01 lowCoverage 4.2532e-01 1.0000e+00 lowCoverage 0.0451791 3.0422e-01 lowCoverage 1.0000e+00 lowCoverage 0.925591 0.919617 0.00426509 4 0.930272 0.909456 0.0208167 1.0361e-01 8.5653e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.7522e-02 8.9412e-01 lowCoverage 1.0000000 1.00000000 lowCoverage 0.0135787 5.0631e-01 lowCoverage 1.000000 lowCoverage 0.829882 0.919617 -0.0922174 5 0.832983 0.909456 -0.0764729 9.9562e-01 2.2745e-02 weaklyHypometh 1.0000e+00 2.7077e-01 insignificant 9.4769e-01 2.6663e-01 insignificant 1.000000 1.0000e+00 insignificant -0.0316004 4.6585e-01 lowCoverage 1.00000000 lowCoverage chr7 155436635 155437635 28945 ENSG00000221113 0.91216 696 13 0.865403 336 12 0.71667 264 13 0.920649 687 15 0.8997976 89 8 0.881342 733 15 0.852592 249 14 0.859259 249 13 0.782528 167 12 0.914729 333 15 0.907744 411 15 0.8385071 134 11 0.664525 289 13 0.960000 12 1 0.792731 293 15 0.8971551 107 10 0.693152 91 8 0.585942 758 15 0.9056303 258 14 0.888488 577 15 0.918175 148 12 0.6541485 362 15 0.856739 406 15 0.843173 158 13 0.754083 201 12 0.866053 522 15 0.787923 258 15 0.920855 180 14 0.8913949 357 14 0.899921 466 15 0.897326 528 15 0.915857 765 15 0.6028963 511 15 0.583307 293 12 0.421119 472 9 0.7564713 254 14 0.595204 315 15 0.663470 476 15 0.916620 868 13 0.868597 677 13 0.885365 696 12 0.894068 554 11 0.854202 1057 15 0.903230 0.861666 0.767993 0.919239 0.8844544 0.888458 0.874322 0.8601990 0.7579206 0.895504 0.895615 0.843668 0.646273 NA 0.853966 0.8376681 0.739071 0.567078 0.906478 0.880358 0.893706 0.7626797 0.89926 0.886788 0.744622 0.879575 0.833399 0.935096 0.930328 0.885397 0.900153 0.923199 0.7371573 0.553194 0.546732 0.8094986 0.716509 0.770626 0.914845 0.861735 0.925772 0.885571 0.837788 12 0.832170 0.867925 -3.9732e-02 15 0.807375 0.862381 -0.0550061 0.99133718 0.0012227 weaklyHypometh 1.00000 0.30569 insignificant 0.9775740 0.05985459 insignificant 1 1.00000 insignificant -0.0135206 0.679396 insignificant 1 insignificant 0.832244 0.631488 0.1968733 14 0.835516 0.616018 0.2194979 5.1370e-21 9.9895e-01 weaklyHypermeth 3.0218e-19 1.0000e+00 weaklyHypermeth 6.6431e-09 9.9716e-01 weaklyHypermeth 6.6431e-07 1.0000e+00 weaklyHypermeth 0.23320519 1.8705e-03 weaklyHypermeth 6.6802e-02 weaklyHypermeth 0.832244 0.877403 -0.0489127 14 0.835516 0.879157 -0.0436412 9.8962e-01 7.6786e-03 weaklyHypometh 1.0000e+00 4.2659e-01 insignificant 9.3953e-01 3.4720e-02 weaklyHypometh 1.000000 1.0000e+00 insignificant -0.0468205 7.1714e-02 insignificant 1.0000000 insignificant 0.867342 0.629741 0.2395142 14 0.766050 0.551949 0.21410122 1.8010e-20 9.9999e-01 hypermethylated 1.6373e-18 1.0000e+00 hypermethylated 6.4110e-10 1.0000e+00 hypermethylated 2.1260e-07 1.0000e+00 hypermethylated 0.2467258 1.3370e-03 weaklyHypermeth 5.5709e-02 weaklyHypermeth 0.867542 0.877434 -0.00494138 14 0.813928 0.886710 -0.0727818 8.1811e-01 6.6317e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.8351e-01 7.6160e-01 insignificant 1.0000000 1.00000000 insignificant -0.0332999 2.1590e-01 insignificant 1.000000 insignificant 0.630942 0.877466 -0.2368990 13 0.543546 0.893374 -0.3498286 1.0000e+00 1.1738e-08 hypomethylated 1.0000e+00 5.8688e-07 hypomethylated 1.0000e+00 2.5451e-06 hypomethylated 1.000000 3.1814e-04 hypomethylated -0.2800257 1.2154e-03 weaklyHypometh 0.06077196 weaklyHypometh chr7 156328835 156329835 28949 RNF32 ENSG00000105982 0.79823 209 5 0.678062 94 5 0.71282 62 5 0.713541 241 5 0.6752747 58 4 0.762230 157 5 0.534725 93 5 0.579904 65 5 0.721538 54 5 0.700000 26 3 0.717594 161 5 0.7800000 22 2 0.525641 30 2 0.373333 29 3 0.850000 34 3 0.7600000 13 1 NA 0 0 0.787855 135 5 0.7229323 55 3 0.760189 117 5 0.770000 20 2 0.7500000 6 0 0.744444 125 5 0.684712 68 5 0.722129 47 2 0.720847 97 5 0.575641 45 3 0.670370 26 3 0.6503030 65 3 0.732479 72 5 0.759835 110 5 0.690909 120 5 0.6531513 112 5 0.480159 70 4 0.709855 195 5 0.6666667 13 2 0.573589 122 5 0.774762 74 5 0.748303 293 5 0.746826 250 5 0.699320 322 5 0.781951 96 3 0.705319 266 5 0.800148 0.695147 0.726884 0.731383 0.6868964 0.770284 0.523477 0.5807356 0.7375291 0.727273 0.726827 0.742424 0.638912 0.45791 0.886364 0.7878788 NA 0.776212 0.720836 0.756036 0.742424 0.6791803 0.74579 0.685388 0.748324 0.719256 0.549728 0.821549 0.667585 0.684071 0.767551 0.672176 0.6481092 0.506494 0.687120 0.8367960 0.692440 0.766595 0.755309 0.761950 0.703162 0.797857 0.710053 0 0.749849 0.747184 -2.0684e-03 5 0.721060 0.724246 -0.0031862 0.74253419 0.5017438 insignificant 1.00000 1.00000 insignificant 0.7431089 0.33554751 insignificant 1 1.00000 insignificant -0.0136633 0.661051 lowCoverage 1 lowCoverage 0.749849 0.792808 0.0162382 5 0.721060 0.693069 0.0279909 1.3523e-01 3.4675e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.8219e-01 4.5786e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.04927862 3.4850e-01 lowCoverage 1.0000e+00 lowCoverage 0.749849 0.821516 -0.0188065 5 0.721060 0.730689 -0.0096287 5.8648e-01 2.2504e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.0426e-01 1.4001e-01 insignificant 1.000000 1.0000e+00 insignificant -0.0440348 1.6302e-01 lowCoverage 1.0000000 lowCoverage 0.746567 0.790102 0.0237354 5 0.686872 0.577557 0.10931430 1.9703e-01 3.8192e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.8909e-01 6.7033e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0629419 2.1040e-01 lowCoverage 1.0000e+00 lowCoverage 0.747184 0.821516 -0.01495735 5 0.724246 0.730689 -0.0064425 4.6414e-01 1.0990e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.2476e-01 1.9451e-01 insignificant 1.0000000 1.00000000 insignificant -0.0303716 1.9393e-01 lowCoverage 1.000000 lowCoverage 0.792808 0.821516 -0.0274990 5 0.693069 0.730689 -0.0376197 3.5192e-01 2.9233e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.2032e-01 2.0678e-01 insignificant 1.000000 1.0000e+00 insignificant -0.0933135 8.1734e-02 lowCoverage 1.00000000 lowCoverage chr7 156388135 156389135 28952 LMBR1 ENSG00000105983 0.80010 212 7 0.538091 99 4 0.43046 123 8 0.866529 181 8 0.7477464 151 8 0.626010 56 6 0.636716 140 3 0.685178 104 4 0.636091 95 3 0.885101 83 3 0.722427 180 8 0.7280000 77 3 0.852057 152 4 0.627451 51 3 0.896369 90 3 0.8597308 70 3 0.525000 33 3 0.808697 228 3 0.8165577 102 8 0.814815 33 3 0.648860 57 3 0.6226852 69 3 0.801109 202 8 0.740785 61 8 0.791101 113 3 0.711609 85 8 0.532853 50 3 0.655443 67 3 0.5007937 121 3 0.729630 87 6 0.767774 87 5 0.718750 26 0 0.5439174 161 5 0.644643 127 3 0.386364 64 5 0.8367347 23 3 0.482476 120 3 0.811362 66 5 0.827636 321 8 0.881833 251 8 0.840521 171 3 0.687500 224 3 0.830291 247 8 0.675769 0.523639 0.656586 0.781674 0.7208286 0.711706 0.657924 0.7732022 0.6770614 0.685219 0.647143 0.585985 0.731244 0.65238 0.809748 0.6572214 0.720954 0.686995 0.678388 0.664234 0.668725 0.6791058 0.63262 0.615470 0.759562 0.702662 0.740642 0.782017 0.662739 0.732968 0.668478 0.763382 0.6271746 0.588113 0.394161 0.6482447 0.579649 0.693665 0.716637 0.712598 0.707901 0.718746 0.704724 3 0.685398 0.732683 -2.8905e-02 4 0.706904 0.728711 -0.0218071 0.90490151 0.1366123 lowCoverage 1.00000 1.00000 lowCoverage 0.2500591 0.57480447 lowCoverage 1 1.00000 lowCoverage 0.0400399 0.333605 lowCoverage 1 lowCoverage 0.685398 0.593583 0.1025357 4 0.706904 0.570194 0.1367106 6.9909e-06 9.1408e-01 lowCoverage 1.4267e-04 1.0000e+00 lowCoverage 7.7216e-03 9.8032e-01 lowCoverage 1.4569e-01 1.0000e+00 lowCoverage 0.10757329 2.2031e-01 lowCoverage 1.0000e+00 lowCoverage 0.685398 0.743822 -0.0558666 4 0.706904 0.859329 -0.1524248 9.9991e-01 4.6586e-03 lowCoverage 1.0000e+00 3.1402e-01 lowCoverage 9.9676e-01 1.1162e-01 lowCoverage 1.000000 1.0000e+00 lowCoverage -0.0884000 7.0881e-02 lowCoverage 1.0000000 lowCoverage 0.732683 0.593583 0.1359797 5 0.728711 0.570194 0.15851770 2.3755e-08 7.1034e-01 weaklyHypermeth 6.0910e-07 1.0000e+00 weaklyHypermeth 2.4713e-03 5.9731e-01 weaklyHypermeth 4.8457e-02 1.0000e+00 weaklyHypermeth 0.0675334 4.2244e-01 lowCoverage 1.0000e+00 lowCoverage 0.732683 0.743822 -0.04075395 5 0.728711 0.859329 -0.1306177 9.9774e-01 1.5158e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9583e-01 5.8419e-02 insignificant 1.0000000 1.00000000 insignificant -0.1284399 1.4008e-02 lowCoverage 0.762803 lowCoverage 0.593583 0.743822 -0.1659482 5 0.570194 0.859329 -0.2891354 9.9999e-01 1.1520e-06 weaklyHypometh 1.0000e+00 4.4307e-05 weaklyHypometh 9.9934e-01 2.0616e-02 weaklyHypometh 1.000000 3.2724e-01 insignificant -0.1959733 4.6550e-02 lowCoverage 0.72915420 lowCoverage chr7 156526235 156527235 28953 ENSG00000213992 0.85608 309 10 0.796381 401 10 0.50614 295 10 0.934124 118 7 0.8382143 94 8 0.740126 419 10 0.779223 278 10 0.692688 201 10 0.831667 128 9 0.774470 109 10 0.859278 400 10 0.7109559 126 10 0.706580 111 10 0.540441 67 4 0.741254 194 10 0.5483550 82 10 0.934772 58 7 0.713090 204 10 0.8385881 330 10 0.828003 427 10 0.717828 121 6 0.5224074 97 10 0.822767 292 10 0.650656 158 10 0.817460 56 5 0.822586 332 10 0.550346 128 10 0.728179 75 7 0.7507768 276 6 0.612180 426 10 0.556323 449 10 0.795352 483 10 0.4771125 324 10 0.614493 258 10 0.122549 269 6 0.4416667 70 7 0.445362 262 10 0.537275 404 10 0.771707 389 10 0.833987 369 10 0.761904 177 10 0.590129 253 10 0.784444 123 10 0.849900 0.737603 0.459284 0.897784 0.7603746 0.807658 0.733930 0.7157084 0.7886888 0.754986 0.813647 0.626008 0.647280 0.64798 0.685424 0.5019738 0.870986 0.756937 0.840390 0.789877 0.733510 0.5320901 0.78004 0.570772 0.861848 0.760174 0.549058 0.668565 0.651959 0.618888 0.514824 0.749614 0.4082768 0.554815 0.272301 0.3702678 0.428524 0.428577 0.721033 0.791802 0.701381 0.581296 0.752217 4 0.751092 0.651918 8.7027e-02 10 0.654285 0.658107 -0.0038225 0.00032877 0.9974185 weaklyHypermeth 0.32877 1.00000 insignificant 0.0048046 0.99851629 weaklyHypermeth 1 1.00000 insignificant 0.0629496 0.149657 insignificant 1 insignificant 0.751610 0.383743 0.3508079 10 0.785142 0.479125 0.3060166 2.1204e-26 1.0000e+00 hypermethylated 1.9277e-24 1.0000e+00 hypermethylated 8.7830e-13 1.0000e+00 hypermethylated 2.9277e-10 1.0000e+00 hypermethylated 0.31877850 4.0183e-03 weaklyHypermeth 1.1819e-01 insignificant 0.751264 0.762014 0.0288864 10 0.713765 0.696587 0.0171785 4.2380e-01 7.1083e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.7633e-01 9.1889e-01 insignificant 1.000000 1.0000e+00 insignificant 0.0100871 8.4347e-01 insignificant 1.0000000 insignificant 0.652581 0.383743 0.2527801 10 0.714729 0.479125 0.23560353 2.2013e-14 9.9997e-01 hypermethylated 1.1586e-12 1.0000e+00 hypermethylated 4.0043e-08 9.9995e-01 hypermethylated 4.1730e-06 1.0000e+00 hypermethylated 0.2558289 1.1299e-02 weaklyHypermeth 2.6902e-01 insignificant 0.652475 0.762014 -0.05593831 10 0.695208 0.696587 -0.0013788 9.8288e-01 4.1977e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.8667e-01 2.4930e-01 insignificant 1.0000000 1.00000000 insignificant -0.0528625 3.4241e-01 insignificant 1.000000 insignificant 0.383743 0.762595 -0.3324192 10 0.479125 0.766246 -0.2871203 1.0000e+00 5.3562e-12 hypomethylated 1.0000e+00 4.8693e-10 hypomethylated 1.0000e+00 4.3075e-08 hypomethylated 1.000000 1.4358e-05 hypomethylated -0.3086914 4.9631e-03 weaklyHypometh 0.13060817 insignificant chr7 156610135 156611135 28954 ENSG00000213992 0.89788 162 9 0.799358 149 8 0.80361 153 7 0.922377 188 9 0.8795788 85 6 0.907487 168 7 0.698845 127 6 0.910214 104 8 0.823438 75 7 0.943750 31 3 0.866183 204 8 0.9351852 34 4 0.884375 79 5 0.600000 10 1 0.797123 57 7 0.5000000 20 0 1.000000 3 0 0.740848 115 4 0.9492780 139 7 0.775214 111 5 0.907920 71 7 0.8666667 14 1 0.810420 80 8 0.929012 52 6 0.864198 102 5 0.933110 224 14 0.868146 89 8 0.833333 27 2 0.9424170 68 5 0.843656 230 9 0.810322 250 12 0.966020 184 10 0.6688282 154 8 0.794049 132 8 0.663399 231 7 0.6608249 161 8 0.718198 127 8 0.658981 244 12 0.819109 87 6 0.865987 212 14 0.840730 191 11 0.700000 25 3 0.784742 202 12 0.857143 0.791769 0.822877 0.887500 0.8830049 0.934169 0.722446 0.9177545 0.8200431 0.918103 0.857880 0.857820 0.872749 0.80142 0.855774 0.3022578 NA 0.862408 0.952115 0.673870 0.898517 0.8773471 0.92220 0.900383 0.980843 0.907981 0.878819 0.867119 0.960288 0.886019 0.903835 0.969620 0.6961384 0.808736 0.697431 0.5802508 0.736485 0.735969 0.924765 0.896182 0.878420 0.896427 0.847686 0 0.856788 0.902174 -4.6296e-02 8 0.836947 0.803751 0.0331957 0.98182197 0.1526599 insignificant 1.00000 1.00000 insignificant 0.9986845 0.18142397 insignificant 1 1.00000 insignificant -0.0495314 0.129245 insignificant 1 insignificant 0.857499 0.672084 0.1805127 9 0.868874 0.674310 0.1945638 1.6263e-06 9.9976e-01 weaklyHypermeth 3.5355e-05 1.0000e+00 weaklyHypermeth 1.3749e-03 9.9963e-01 weaklyHypermeth 3.0553e-02 1.0000e+00 weaklyHypermeth 0.13769040 8.9585e-04 weaklyHypermeth 4.0720e-02 weaklyHypermeth 0.856930 0.811715 0.0102497 7 0.845099 0.768652 0.0764477 2.3007e-01 6.2162e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.4328e-01 5.5963e-01 insignificant 1.000000 1.0000e+00 insignificant 0.0296234 4.7229e-01 insignificant 1.0000000 insignificant 0.903273 0.672084 0.2125755 8 0.850288 0.674310 0.17597721 1.2898e-08 9.9995e-01 hypermethylated 3.5828e-07 1.0000e+00 hypermethylated 2.4805e-04 1.0000e+00 hypermethylated 6.8902e-03 1.0000e+00 hypermethylated 0.1872218 3.8220e-05 weaklyHypermeth 2.7300e-03 weaklyHypermeth 0.902687 0.813464 0.06494746 6 0.811367 0.798502 0.0128650 4.5776e-03 2.2778e-01 weaklyHypermeth 2.3835e-01 1.0000e+00 insignificant 9.9139e-02 6.8281e-01 insignificant 1.0000000 1.00000000 insignificant 0.0791549 4.8897e-02 weaklyHypermeth 1.000000 insignificant 0.672084 0.815493 -0.1969792 7 0.674310 0.835814 -0.1615041 9.9822e-01 1.0939e-03 weaklyHypometh 1.0000e+00 2.1449e-02 weaklyHypometh 9.9965e-01 8.4542e-04 weaklyHypometh 1.000000 2.8181e-02 weaklyHypometh -0.1080670 1.7829e-02 weaklyHypometh 0.35658276 insignificant chr7 156759135 156760135 28959 ENSG00000213990 0.10487 341 7 0.084612 216 7 0.10318 226 7 0.043937 414 7 0.0557823 151 7 0.076024 448 7 0.106811 200 7 0.084661 173 7 0.085015 277 7 0.076465 215 7 0.133353 146 7 0.0560665 183 7 0.054437 219 7 0.160000 25 1 0.054046 275 7 0.1115646 145 7 0.068002 148 7 0.088822 396 7 0.1537634 118 7 0.082198 348 7 0.178855 59 7 0.0305950 285 7 0.105311 288 7 0.101241 105 7 0.030045 136 7 0.080254 256 7 0.058956 158 7 0.079437 78 6 0.0859481 148 7 0.088596 220 7 0.129490 243 7 0.131755 391 7 0.0031056 226 7 0.000000 189 7 0.000000 5 0 0.0054945 165 7 0.089694 64 7 0.053144 194 7 0.051638 386 7 0.036199 376 7 0.043066 335 7 0.048980 363 7 0.075596 485 7 0.105247 0.081103 0.096694 0.041269 0.0431431 0.084706 0.109351 0.0653139 0.0878206 0.077556 0.115685 0.062582 0.046074 NA 0.061082 0.1059804 0.056952 0.087349 0.125879 0.085323 0.250565 0.0208248 0.11392 0.105667 0.020080 0.065728 0.053705 0.068061 0.077066 0.067997 0.105589 0.152643 0.0022704 0.000000 0.019086 0.0151637 0.106274 0.032246 0.044540 0.029153 0.031423 0.030436 0.063364 7 0.080617 0.086185 -7.8811e-03 7 0.082588 0.093106 -0.0105180 0.55926914 0.3330581 insignificant 1.00000 1.00000 insignificant 0.3214349 0.60127075 insignificant 1 1.00000 insignificant -0.0025267 0.861101 insignificant 1 insignificant 0.080617 0.023725 0.0564221 7 0.082588 0.025646 0.0569421 1.2146e-06 9.9999e-01 weaklyHypermeth 2.6991e-05 1.0000e+00 weaklyHypermeth 4.8351e-06 1.0000e+00 weaklyHypermeth 2.1978e-04 1.0000e+00 weaklyHypermeth 0.06394062 6.4046e-03 weaklyHypermeth 1.6854e-01 insignificant 0.080617 0.042159 0.0364370 7 0.082588 0.053180 0.0294080 5.6318e-04 9.8030e-01 weaklyHypermeth 4.3321e-02 1.0000e+00 weaklyHypermeth 4.3842e-03 9.8927e-01 weaklyHypermeth 0.326593 1.0000e+00 insignificant 0.0380848 1.5833e-03 weaklyHypermeth 0.1647651 insignificant 0.086185 0.023725 0.0650050 7 0.093106 0.025646 0.06746006 1.3329e-06 9.9821e-01 weaklyHypermeth 2.9619e-05 1.0000e+00 weaklyHypermeth 1.3522e-05 9.9816e-01 weaklyHypermeth 5.8792e-04 1.0000e+00 weaklyHypermeth 0.0664673 5.9104e-03 weaklyHypermeth 1.7383e-01 insignificant 0.086185 0.042159 0.04334403 7 0.093106 0.053180 0.0399260 4.1241e-03 9.5545e-01 weaklyHypermeth 2.2912e-01 1.0000e+00 insignificant 1.9819e-02 8.8329e-01 weaklyHypermeth 0.9909404 1.00000000 insignificant 0.0406115 1.0852e-02 weaklyHypermeth 0.762803 insignificant 0.023725 0.042159 -0.0216095 7 0.025646 0.053180 -0.0275341 9.9289e-01 9.5871e-04 weaklyHypometh 1.0000e+00 1.9174e-02 weaklyHypometh 9.9928e-01 4.4002e-03 weaklyHypometh 1.000000 9.1672e-02 weaklyHypometh -0.0258558 1.6823e-01 insignificant 1.00000000 insignificant chr8 12550 13550 28997 NA 0.86447 91 5 0.872063 235 5 0.82335 110 5 0.878704 45 4 0.8624709 28 2 0.584610 84 2 0.796474 55 3 0.830905 62 3 0.562500 57 2 0.956815 33 2 0.828571 48 3 0.4090909 20 2 0.883415 51 2 0.853535 31 2 0.926901 32 2 0.9220779 19 2 0.761905 41 3 0.934762 35 4 0.8095238 38 3 0.892204 67 4 0.958333 12 1 0.8432018 39 2 0.872634 59 4 0.611111 21 2 0.684174 61 3 0.855417 175 5 0.569444 18 2 0.682540 14 2 0.7000000 24 2 0.897679 205 5 0.829202 165 4 0.931303 101 5 0.9449586 166 4 0.492424 20 2 0.876586 101 5 0.6111111 22 2 0.819903 51 2 0.871748 153 5 0.909176 82 3 0.946841 67 5 0.730000 21 2 0.883333 31 2 0.951389 32 2 0.842275 0.848739 0.741766 0.914742 0.8000823 0.798101 0.776301 0.8531811 0.7635747 0.941891 0.826891 0.604278 0.827876 0.80570 0.910217 0.8961039 0.736695 0.911765 0.781513 0.896770 0.926471 0.7604489 0.84012 0.568627 0.642239 0.763072 0.839869 0.596639 0.758824 0.888173 0.854218 0.880932 0.9227941 0.471925 0.734399 0.5490196 0.879113 0.805576 0.801661 0.878508 0.476471 0.911765 0.911765 2 0.836717 0.840045 1.2417e-02 5 0.710783 0.702742 0.0080409 0.24307692 0.6050979 insignificant 1.00000 1.00000 insignificant 0.1953313 0.63955171 insignificant 1 1.00000 insignificant 0.0264642 0.592561 lowCoverage 1 lowCoverage 0.837426 0.875244 -0.0055228 5 0.852940 0.883616 -0.0306764 8.6786e-01 1.5369e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.6958e-01 3.6855e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.04326203 6.0003e-01 lowCoverage 1.0000e+00 lowCoverage 0.837426 0.845494 -0.0105883 3 0.852940 0.895700 -0.0427602 8.8699e-01 4.4892e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.4532e-01 7.8333e-02 lowCoverage 1.000000 1.0000e+00 lowCoverage -0.0714305 1.9411e-01 lowCoverage 1.0000000 lowCoverage 0.840985 0.875244 -0.0251228 5 0.843291 0.883616 -0.04032553 8.6093e-01 4.0368e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 6.6558e-01 2.8953e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0167979 8.4208e-01 lowCoverage 1.0000e+00 lowCoverage 0.840985 0.845494 -0.02755267 3 0.843291 0.895700 -0.0524093 9.7607e-01 2.0804e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.6628e-01 4.8205e-02 lowCoverage 1.0000000 1.00000000 lowCoverage -0.0978947 1.0449e-01 lowCoverage 1.000000 lowCoverage 0.875244 0.845494 -0.0109044 3 0.883616 0.895700 -0.0120838 8.8090e-01 9.5364e-02 lowCoverage 1.0000e+00 9.4419e-01 lowCoverage 9.8829e-01 7.7567e-02 lowCoverage 1.000000 9.2498e-01 lowCoverage -0.1146926 2.0557e-01 lowCoverage 1.00000000 lowCoverage chr8 12750 13750 28998 NA 0.86447 91 5 0.872063 235 5 0.82335 110 5 0.878704 45 4 0.8624709 28 2 0.584610 84 2 0.796474 55 3 0.830905 62 3 0.562500 57 2 0.956815 33 2 0.828571 48 3 0.4090909 20 2 0.883415 51 2 0.853535 31 2 0.926901 32 2 0.9220779 19 2 0.761905 41 3 0.934762 35 4 0.8095238 38 3 0.892204 67 4 0.958333 12 1 0.8432018 39 2 0.872634 59 4 0.611111 21 2 0.684174 61 3 0.855417 175 5 0.569444 18 2 0.682540 14 2 0.7000000 24 2 0.897679 205 5 0.829202 165 4 0.931303 101 5 0.9449586 166 4 0.492424 20 2 0.876586 101 5 0.6111111 22 2 0.819903 51 2 0.871748 153 5 0.909176 82 3 0.946841 67 5 0.730000 21 2 0.883333 31 2 0.951389 32 2 0.842275 0.848739 0.741766 0.914742 0.8000823 0.798101 0.776301 0.8531811 0.7635747 0.941891 0.826891 0.604278 0.827876 0.80570 0.910217 0.8961039 0.736695 0.911765 0.781513 0.896770 0.926471 0.7604489 0.84012 0.568627 0.642239 0.763072 0.839869 0.596639 0.758824 0.888173 0.854218 0.880932 0.9227941 0.471925 0.734399 0.5490196 0.879113 0.805576 0.801661 0.878508 0.476471 0.911765 0.911765 2 0.836717 0.840045 1.2417e-02 5 0.710783 0.702742 0.0080409 0.24307692 0.6050979 insignificant 1.00000 1.00000 insignificant 0.1953313 0.63955171 insignificant 1 1.00000 insignificant 0.0264642 0.592561 lowCoverage 1 lowCoverage 0.837426 0.875244 -0.0055228 5 0.852940 0.883616 -0.0306764 8.6786e-01 1.5369e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.6958e-01 3.6855e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.04326203 6.0003e-01 lowCoverage 1.0000e+00 lowCoverage 0.837426 0.845494 -0.0105883 3 0.852940 0.895700 -0.0427602 8.8699e-01 4.4892e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.4532e-01 7.8333e-02 lowCoverage 1.000000 1.0000e+00 lowCoverage -0.0714305 1.9411e-01 lowCoverage 1.0000000 lowCoverage 0.840985 0.875244 -0.0251228 5 0.843291 0.883616 -0.04032553 8.6093e-01 4.0368e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 6.6558e-01 2.8953e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0167979 8.4208e-01 lowCoverage 1.0000e+00 lowCoverage 0.840985 0.845494 -0.02755267 3 0.843291 0.895700 -0.0524093 9.7607e-01 2.0804e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.6628e-01 4.8205e-02 lowCoverage 1.0000000 1.00000000 lowCoverage -0.0978947 1.0449e-01 lowCoverage 1.000000 lowCoverage 0.875244 0.845494 -0.0109044 3 0.883616 0.895700 -0.0120838 8.8090e-01 9.5364e-02 lowCoverage 1.0000e+00 9.4419e-01 lowCoverage 9.8829e-01 7.7567e-02 lowCoverage 1.000000 9.2498e-01 lowCoverage -0.1146926 2.0557e-01 lowCoverage 1.00000000 lowCoverage chr8 1720450 1721450 29013 CLN8 ENSG00000182372 0.973792 455 38 0.9205012 600 40 0.9564016 1258 40 0.967481 186 16 0.97040 1058 40 0.963256 428 39 0.9652507 1190 40 0.930123 413 38 0.9574400 947 40 0.966752 880 40 0.9420484 1723 40 0.9711075 1868 40 0.950093 728 40 NA 0 0 0.970160 1186 40 0.9651959 1624 40 0.978781 1575 40 0.984907 528 38 0.981463 815 39 0.974350 424 37 0.953815 468 38 1.000000 27 0 0.9504652 595 40 0.965551 361 36 1.000000 17 0 0.955318 522 40 0.953402 313 37 0.953889 479 37 0.92152 354 36 0.9530602 564 40 0.9568987 505 39 0.959852 682 40 0.976041 539 39 0.9688074 733 39 0.9538736 711 34 0.9606481 103 6 0.9675363 696 38 0.968120 488 39 0.990593 335 35 0.988668 390 38 0.995238 145 14 0.976852 177 25 0.960054 418 36 0.9774899 0.918464 0.9575874 0.968667 0.970261 0.9614479 0.9633790 0.9342657 0.9570614 0.9649893 0.9462736 0.9710247 0.9512133 NA 0.9717982 0.9655012 0.978158 0.9837426 0.9801949 0.9707266 0.953348 0.9751606 0.9436430 0.965973 0.972583 0.955640 0.9500359 0.9506537 0.929669 0.9538421 0.9581690 0.9704698 0.9739524 0.9670162 0.95080358 0.9607846 0.9663715 0.9720380 0.991434 0.990919 0.9936000 0.983920 0.9567875 0 0.9627083 0.953550 0.00948070 39 0.962728 0.953493 0.0092346 0.0015112 0.98243080 weaklyHypermeth 1 1.00000 insignificant 0.883842 0.13730945 insignificant 1 1.00000 insignificant 0.00229125 0.7558134 insignificant 1.00000 insignificant 0.9627083 0.963914 -0.0015966 39 0.962728 0.964205 -0.00147734 8.9299e-01 1.3872e-05 weaklyHypometh 1.0000e+00 2.7745e-03 weaklyHypometh 9.9994e-01 8.4043e-06 weaklyHypometh 1.0000e+00 0.0028014 weaklyHypometh -0.00323219 5.2226e-01 insignificant 1.0000e+00 insignificant 0.9627083 0.9802048 -1.8134e-02 33 0.962728 0.980912 -1.8184e-02 9.9998e-01 3.1612e-09 weaklyHypometh 1.0000e+00 1.5806e-06 weaklyHypometh 1.0000e+00 3.2820e-12 weaklyHypometh 1.0000e+00 3.2820e-09 weaklyHypometh -0.0196755 3.1519e-02 weaklyHypometh 7.1634e-01 insignificant 0.953550 0.963914 -0.0087183 39 0.953493 0.964205 -0.0107119 9.9930e-01 2.8235e-04 weaklyHypometh 1.0000e+00 6.5664e-02 weaklyHypometh 9.9938e-01 1.3689e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.0055234 4.3565e-01 insignificant 1.0000e+00 insignificant 0.9535502 0.9802048 -0.0260017 33 0.953493 0.980912 -0.02741858 1.0000e+00 1.7446e-05 weaklyHypometh 1.0000e+00 0.00581535 weaklyHypometh 1.0000e+00 4.1852e-05 weaklyHypometh 1.0000e+00 0.041852 weaklyHypometh -0.0219668 0.02941486 weaklyHypometh 0.69022 insignificant 0.9639144 0.9802048 -0.0167071 33 0.964205 0.980912 -0.0167067 9.9928e-01 1.0053e-01 insignificant 1.0000000 7.7984e-01 insignificant 0.9999999 1.1782e-01 insignificant 1.0000 1.0000e+00 insignificant -0.0164434 5.9327e-02 insignificant 6.6659e-01 insignificant chr8 1721050 1722050 29014 CLN8 ENSG00000182372 0.967888 226 19 0.9035975 269 21 0.9647557 669 21 0.948120 80 9 0.96400 527 21 0.962585 219 20 0.9582370 544 21 0.952589 216 20 0.9418253 502 21 0.967655 487 21 0.9336784 926 21 0.9680575 933 21 0.949780 352 21 NA 0 0 0.978112 595 21 0.9658435 793 21 0.987487 804 21 0.989972 253 20 0.978339 397 21 0.971984 211 21 0.952386 249 21 1.000000 25 0 0.9684603 293 21 0.975341 181 20 1.000000 10 0 0.942874 291 21 0.941193 148 19 0.953593 256 19 0.94260 188 20 0.9534325 303 21 0.9579842 244 20 0.943681 357 21 0.971938 294 21 0.9649272 384 20 0.9224753 429 21 0.9212963 45 2 0.9684584 352 20 0.957774 230 21 0.990380 159 17 0.986508 226 20 1.000000 93 10 0.950980 83 10 0.955993 191 21 0.9742932 0.894131 0.9658848 0.953258 0.961028 0.9605540 0.9555141 0.9521469 0.9408256 0.9677251 0.9445433 0.9699058 0.9541376 NA 0.9810976 0.9684067 0.989074 0.9890619 0.9768696 0.9655248 0.949025 0.9905621 0.9640603 0.970577 0.970312 0.939759 0.9368024 0.9551775 0.937172 0.9444784 0.9527955 0.9623474 0.9674963 0.9624903 0.91254026 0.9218710 0.9694768 0.9618432 0.991777 0.992682 1.0000000 0.967788 0.9526524 0 0.9622348 0.953242 0.00931980 21 0.961938 0.954168 0.0077700 0.0206678 0.85435107 weaklyHypermeth 1 1.00000 insignificant 0.920715 0.08856706 insignificant 1 1.00000 insignificant -0.00019848 0.9794233 insignificant 1.00000 insignificant 0.9622348 0.953287 0.0087478 21 0.961938 0.952913 0.00902533 4.8594e-01 5.7525e-03 inconclusive 1.0000e+00 5.2296e-01 insignificant 9.2561e-01 6.0440e-03 inconclusive 1.0000e+00 0.5494511 insignificant 0.00961847 3.8839e-01 insignificant 1.0000e+00 insignificant 0.9622348 0.9787234 -1.7012e-02 17 0.961938 0.978149 -1.6211e-02 9.9885e-01 1.0245e-04 weaklyHypometh 1.0000e+00 2.5613e-02 weaklyHypometh 1.0000e+00 1.3621e-06 weaklyHypometh 1.0000e+00 6.8103e-04 weaklyHypometh -0.0160089 1.9014e-01 insignificant 1.0000e+00 insignificant 0.953242 0.953287 0.0041317 21 0.954168 0.952913 0.0012554 8.9208e-01 6.4626e-03 inconclusive 1.0000e+00 8.0782e-01 insignificant 7.9837e-01 1.3697e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0098169 4.0411e-01 insignificant 1.0000e+00 insignificant 0.9532417 0.9787234 -0.0247734 17 0.954168 0.978149 -0.02398050 9.9863e-01 9.5735e-04 weaklyHypometh 1.0000e+00 0.19146980 insignificant 9.9999e-01 5.1488e-03 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.0158104 0.21063235 insignificant 1.00000 insignificant 0.9532872 0.9787234 -0.0280097 17 0.952913 0.978149 -0.0252359 9.6661e-01 1.3995e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.9994639 6.4887e-02 insignificant 1.0000 7.4583e-01 insignificant -0.0256273 9.2994e-02 insignificant 9.3933e-01 insignificant chr8 1777350 1778350 29017 ARHGEF10 ENSG00000104728 0.947048 538 15 0.8274745 394 15 0.8270738 379 15 0.928038 597 15 0.76755 225 10 0.794709 902 15 0.9561515 171 7 0.874426 451 15 0.8132112 331 15 0.950293 336 15 0.8605632 683 15 0.5789268 139 7 0.942123 512 15 0.9214379 300 15 0.924428 345 15 0.8401329 176 10 0.820513 18 0 0.831570 595 15 0.931139 706 15 0.878381 518 15 0.874419 326 15 0.895033 263 15 0.9364976 255 15 0.859815 261 15 0.941041 219 15 0.952088 585 15 0.887486 544 15 0.751698 175 9 0.89005 689 15 0.8598566 623 15 0.8445341 463 15 0.867220 615 15 0.264647 492 15 0.3150064 348 15 0.3660714 333 10 0.4657738 101 7 0.2015809 670 15 0.506387 727 15 0.757848 387 15 0.900809 476 15 0.925659 396 15 0.924987 360 15 0.784153 442 15 0.9330868 0.841678 0.7993320 0.916172 0.873575 0.9068974 0.9011488 0.8888658 0.8275996 0.9348505 0.8813140 0.7702668 0.9042419 0.9233029 0.9071865 0.8143752 0.948952 0.8087873 0.9275714 0.9685049 0.903874 0.8706140 0.9103721 0.955380 0.947309 0.921302 0.8452535 0.8583871 0.867710 0.9018343 0.9010951 0.8724770 0.2032302 0.2176453 0.28830406 0.3939876 0.1906557 0.3707260 0.904774 0.896820 0.9002430 0.917400 0.8413083 10 0.8955026 0.896772 -0.00288748 15 0.830203 0.864489 -0.0342858 0.9309761 0.31780328 insignificant 1 1.00000 insignificant 0.863209 0.70539258 insignificant 1 1.00000 insignificant -0.01921826 0.4491641 insignificant 1.00000 insignificant 0.8955026 0.263572 0.6259676 15 0.830203 0.328199 0.50200426 2.2082e-112 1.0000e+00 hypermethylated 1.1041e-109 1.0000e+00 hypermethylated 3.9551e-25 1.0000e+00 hypermethylated 1.9776e-22 1.0000000 hypermethylated 0.50751523 2.9219e-05 hypermethylated 1.7187e-03 hypermethylated 0.8970836 0.8918001 7.9235e-03 15 0.871674 0.875573 -3.8996e-03 4.4594e-02 3.5318e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 4.1026e-02 7.8559e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.0020685 9.6159e-01 insignificant 1.0000e+00 insignificant 0.896772 0.263572 0.6323626 15 0.864489 0.328199 0.5362900 7.0099e-86 1.0000e+00 hypermethylated 3.5050e-83 1.0000e+00 hypermethylated 2.1246e-22 1.0000e+00 hypermethylated 1.0623e-19 1.000000 hypermethylated 0.5267335 4.1448e-05 hypermethylated 2.5905e-03 hypermethylated 0.8973642 0.8918001 0.0108590 15 0.881019 0.875573 0.00544571 5.9721e-02 4.5513e-01 insignificant 1.0000e+00 1.00000000 insignificant 4.7593e-02 8.6621e-01 weaklyHypermeth 1.0000e+00 1.000000 insignificant 0.0212867 0.61052196 insignificant 1.00000 insignificant 0.2636909 0.8918001 -0.6132336 15 0.336211 0.875573 -0.5393624 1.0000e+00 2.1352e-37 hypomethylated 1.0000000 7.1173e-35 hypomethylated 1.0000000 2.0796e-11 hypomethylated 1.0000 5.1990e-09 hypomethylated -0.5054468 1.7150e-05 hypomethylated 2.4500e-03 hypomethylated chr8 6644850 6645850 29056 AGPAT5 ENSG00000155189 0.385559 461 9 0.3332431 327 9 0.3227957 365 9 0.289071 420 8 0.38253 211 8 0.329496 694 10 0.2916667 200 9 0.317301 400 9 0.2780525 453 9 0.405870 451 7 0.2806300 347 9 0.3198005 337 9 0.307933 399 7 0.0336139 228 6 0.217310 543 9 0.2760557 329 9 0.304202 132 9 0.270039 460 9 0.301587 230 9 0.300139 464 9 0.447774 109 9 0.303770 292 7 0.3094769 282 9 0.176214 279 10 0.154221 169 7 0.287811 487 10 0.270202 279 8 0.257440 217 9 0.20025 286 9 0.2772636 426 9 0.2600712 386 7 0.313234 456 10 0.190476 250 7 0.2171717 168 9 0.1428571 186 4 0.1975309 71 6 0.2008268 276 10 0.293492 298 9 0.259555 566 9 0.327003 374 9 0.336564 445 9 0.181611 470 9 0.198909 461 9 0.1270772 0.105244 0.1103116 0.080756 0.059025 0.1241818 0.0882749 0.0743931 0.0964274 0.1190342 0.1423254 0.0993767 0.0561315 0.0786404 0.0878114 0.0755961 0.073337 0.0947746 0.0400890 0.0633621 0.094913 0.0415437 0.0811722 0.094805 0.087219 0.067465 0.0675352 0.0634386 0.047921 0.0508051 0.0500653 0.1419113 0.0381690 0.0423916 0.01478794 0.0311471 0.0547879 0.0411672 0.061429 0.076547 0.0448913 0.044203 0.0588510 7 0.1148113 0.091603 0.01635515 9 0.320567 0.342224 -0.0216567 0.0294646 0.96259406 weaklyHypermeth 1 1.00000 insignificant 0.081244 0.92249190 insignificant 1 1.00000 insignificant 0.02586730 0.3608146 insignificant 1.00000 insignificant 0.1152865 0.073659 0.0478309 9 0.365863 0.237008 0.12885427 3.3790e-05 9.9954e-01 weaklyHypermeth 4.4460e-04 1.0000e+00 weaklyHypermeth 5.6496e-04 9.9988e-01 weaklyHypermeth 9.7407e-03 1.0000000 weaklyHypermeth 0.09028537 4.4503e-03 weaklyHypermeth 9.3897e-02 weaklyHypermeth 0.1153794 0.1040587 3.1214e-02 9 0.391996 0.331851 6.0145e-02 1.5175e-02 6.1492e-01 weaklyHypermeth 4.3358e-01 1.0000e+00 insignificant 3.1325e-02 8.2444e-01 weaklyHypermeth 9.7891e-01 1.0000e+00 insignificant 0.0366160 3.4586e-01 insignificant 1.0000e+00 insignificant 0.091603 0.072917 0.0307851 9 0.342224 0.182509 0.1597148 4.3559e-02 9.9619e-01 weaklyHypermeth 3.6299e-01 1.0000e+00 insignificant 4.9460e-02 9.9958e-01 weaklyHypermeth 5.1521e-01 1.000000 insignificant 0.0644181 4.7541e-02 weaklyHypermeth 5.7976e-01 insignificant 0.0911821 0.1036717 0.0139883 9 0.337779 0.280455 0.05732473 6.2703e-01 4.4842e-01 insignificant 1.0000e+00 1.00000000 insignificant 6.9086e-01 3.7622e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0107487 0.78800188 insignificant 1.00000 insignificant 0.0738363 0.1040587 -0.0177888 9 0.253938 0.331851 -0.0779133 9.9970e-01 1.3663e-03 weaklyHypometh 1.0000000 1.9812e-02 weaklyHypometh 0.9998993 4.6408e-02 weaklyHypometh 1.0000 5.7294e-01 insignificant -0.0536694 1.9698e-01 insignificant 1.0000e+00 insignificant chr8 6651150 6652150 29057 AGPAT5 ENSG00000155189 0.967677 197 4 0.9637688 230 7 0.8845428 131 7 0.837862 92 5 0.95169 64 4 0.764270 190 5 0.9682692 66 4 0.990431 114 4 0.9310541 88 4 0.877326 95 4 0.8597623 128 4 0.9722222 32 4 0.975641 141 4 NA 0 0 0.758421 78 4 1.0000000 29 4 1.000000 32 4 0.922707 71 4 0.956699 82 4 0.912102 165 7 0.977273 60 4 0.923295 37 4 0.9634921 123 6 0.951122 54 4 0.987654 43 4 0.936070 252 7 0.994444 66 4 0.972222 71 4 0.91318 126 4 0.9522638 253 6 0.9524975 232 6 0.859987 237 6 0.846562 211 7 0.8559028 62 4 0.9752825 299 6 0.8375000 17 2 0.7651786 72 4 0.946055 250 6 0.972830 118 5 0.932035 175 5 0.967408 125 5 0.838215 147 4 0.994444 127 5 0.9428419 0.947286 0.8875981 0.966366 0.937715 0.9612536 0.9672714 0.9728567 0.8410418 0.8758681 0.9402019 0.9713487 0.9685938 NA 0.9463919 1.0000000 1.000000 0.9003452 0.9553377 0.9239276 0.976558 0.9237421 0.9726864 0.899169 0.971349 0.963604 0.9871069 0.9426974 0.913415 0.9661854 0.9801438 0.9082486 0.9248154 0.8513714 0.92351562 0.8323899 0.9102089 0.8458797 0.939041 0.937945 0.9608380 0.965834 0.9937107 4 0.9377163 0.951094 -0.01406360 4 0.860172 0.955549 -0.0953768 0.9945172 0.02279415 lowCoverage 1 1.00000 lowCoverage 0.914213 0.36685311 lowCoverage 1 1.00000 lowCoverage -0.02786462 0.1728885 lowCoverage 1.00000 lowCoverage 0.9381494 0.881449 0.0640871 4 0.887878 0.821428 0.06644951 4.7420e-03 6.9113e-01 lowCoverage 4.8388e-02 1.0000e+00 lowCoverage 2.9367e-01 9.3129e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 0.04968017 2.0053e-01 lowCoverage 1.0000e+00 lowCoverage 0.9388972 0.9595376 -1.6165e-02 4 0.910172 0.934947 -2.4775e-02 9.5395e-01 3.7982e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.9220e-01 6.2565e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0202260 5.5015e-01 lowCoverage 1.0000e+00 lowCoverage 0.951062 0.881449 0.0716681 6 0.952130 0.821428 0.1307015 7.5108e-03 9.8872e-01 weaklyHypermeth 7.5867e-02 1.0000e+00 weaklyHypermeth 4.3957e-01 9.9290e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0775448 5.6967e-02 lowCoverage 6.7818e-01 lowCoverage 0.9510309 0.9594203 -0.0050335 4 0.948140 0.924105 0.02403509 9.0838e-01 8.6653e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 9.9635e-01 9.1565e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 0.0076387 0.80609001 lowCoverage 1.00000 lowCoverage 0.8843612 0.9594203 -0.0802216 4 0.889880 0.924105 -0.0342249 9.3071e-01 1.7409e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage 0.9906059 5.7420e-01 lowCoverage 1.0000 1.0000e+00 lowCoverage -0.0699061 1.2896e-01 lowCoverage 1.0000e+00 lowCoverage chr8 8691950 8692950 29107 ENSG00000176305 0.879889 311 6 0.8167822 362 6 0.7782828 180 6 0.924860 350 6 0.90799 126 6 0.956503 398 6 0.6790904 113 6 0.869352 241 6 0.8727780 168 6 0.806448 147 6 0.9139445 248 6 0.8941993 51 4 0.915944 257 6 0.8873456 145 6 0.927255 246 6 0.7017544 64 4 0.337500 12 1 0.684211 363 6 0.945682 240 6 0.862494 306 6 0.916667 60 4 0.622405 110 6 0.9371141 182 6 0.711073 96 6 0.802939 107 6 0.898668 349 6 0.764621 184 6 0.642260 89 5 0.92568 269 6 0.9451785 490 6 0.9364244 328 6 0.948026 335 6 0.790100 290 6 0.6725000 109 6 0.8259259 125 2 0.7678571 29 1 0.7117597 163 6 0.754200 331 6 0.692590 293 6 0.797145 222 6 0.866908 249 5 0.797527 230 6 0.750440 289 6 0.8822600 0.770947 0.7559373 0.926569 0.848307 0.9390709 0.7884000 0.8977989 0.8765550 0.9202147 0.8861857 0.8731472 0.8776168 0.8463786 0.9104736 0.8286112 0.798779 0.6738428 0.9280382 0.8905186 0.959322 0.6481406 0.9193096 0.887148 0.775208 0.903982 0.8197858 0.7497993 0.891183 0.9352318 0.9291053 0.9371878 0.7364467 0.6981598 0.90883167 0.8020581 0.9048598 0.8521242 0.721892 0.746345 0.8360320 0.732628 0.7759184 4 0.8597505 0.889573 -0.02840160 6 0.728068 0.796044 -0.0679757 0.9671515 0.05019797 insignificant 1 1.00000 insignificant 0.873015 0.31368103 insignificant 1 1.00000 insignificant -0.00947309 0.8448787 insignificant 1.00000 insignificant 0.8600509 0.816092 0.0495892 6 0.746363 0.716332 0.03003133 5.3543e-02 3.2174e-01 insignificant 4.2834e-01 1.0000e+00 insignificant 1.0481e-01 1.3719e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.07439140 7.0086e-02 lowCoverage 8.2454e-01 lowCoverage 0.8606481 0.7123928 1.0542e-01 6 0.870757 0.762443 1.0831e-01 2.6095e-05 8.8443e-01 weaklyHypermeth 1.5350e-03 1.0000e+00 weaklyHypermeth 8.0497e-04 8.1887e-01 weaklyHypermeth 4.2367e-02 1.0000e+00 weaklyHypermeth 0.0471932 2.9064e-01 insignificant 1.0000e+00 insignificant 0.891506 0.816092 0.0741223 6 0.862145 0.716332 0.1458131 1.1366e-02 7.0887e-01 weaklyHypermeth 1.0623e-01 1.0000e+00 insignificant 9.1202e-02 5.2224e-01 insignificant 8.6859e-01 1.000000 insignificant 0.0838645 6.4113e-02 lowCoverage 7.3148e-01 lowCoverage 0.8920279 0.7123928 0.1288377 6 0.894725 0.762443 0.13228166 4.7945e-07 9.9561e-01 weaklyHypermeth 4.0646e-05 1.00000000 weaklyHypermeth 4.5401e-03 9.8045e-01 weaklyHypermeth 2.2701e-01 1.000000 insignificant 0.0566662 0.23761452 insignificant 1.00000 insignificant 0.8168744 0.7123928 0.0688371 6 0.835721 0.762443 0.0732775 5.3894e-03 7.3085e-01 weaklyHypermeth 0.4491193 1.0000e+00 insignificant 0.1719135 6.1282e-01 insignificant 1.0000 1.0000e+00 insignificant -0.0271982 4.7824e-01 lowCoverage 1.0000e+00 lowCoverage chr8 8882350 8883350 29125 ENSG00000207244 0.665476 143 5 0.6888889 48 3 0.6079365 54 4 0.639339 129 5 0.67212 50 5 0.712622 115 4 0.6687912 88 5 0.608586 80 5 0.8000000 20 2 0.750000 30 4 0.6246667 110 4 0.7700000 28 2 0.714343 42 5 0.5715385 41 3 0.671429 31 5 0.5833333 20 1 0.333333 3 0 0.698649 162 4 0.550000 38 4 0.705314 91 4 0.866667 22 2 0.500000 5 0 0.7161905 54 5 0.791667 45 4 0.857500 77 4 0.783273 99 5 0.709048 39 2 0.742857 22 2 0.60333 63 5 0.7331197 44 4 0.8083694 82 4 0.851515 112 4 0.629814 81 5 0.6948529 56 4 0.4745455 70 5 0.4400000 13 2 0.5359222 79 4 0.666667 73 5 0.719020 135 5 0.679744 116 4 0.726012 179 5 0.773545 67 3 0.779130 157 5 0.7173469 0.755556 0.6843537 0.671675 0.673882 0.7036760 0.6850863 0.6610093 0.9142857 0.8306122 0.7000000 0.8214286 0.7030303 0.6120879 0.7326531 0.6000000 NA 0.7441744 0.6142857 0.7087124 0.809524 0.7267269 0.7872109 0.842857 0.817857 0.806961 0.6744218 0.8653061 0.682857 0.6869963 0.8198722 0.8242424 0.6214729 0.6445522 0.50935065 0.5142857 0.5947760 0.6971429 0.752885 0.736447 0.7419221 0.809826 0.7592547 0 0.7218443 0.794872 -0.05642962 4 0.670794 0.739222 -0.0684271 0.9987155 0.00228237 lowCoverage 1 0.48163 lowCoverage 0.992587 0.03825099 lowCoverage 1 1.00000 lowCoverage -0.09514313 0.0213607 lowCoverage 1.00000 lowCoverage 0.7218443 0.647849 0.0960505 4 0.670794 0.612013 0.05878156 1.1675e-04 7.6427e-01 lowCoverage 1.3899e-03 1.0000e+00 lowCoverage 2.4835e-03 9.7349e-01 lowCoverage 3.9420e-02 1.0000000 lowCoverage 0.07818496 1.4596e-01 lowCoverage 1.0000e+00 lowCoverage 0.7218443 0.7737003 -3.4852e-02 5 0.670794 0.722436 -5.1641e-02 9.7931e-01 4.1183e-02 weaklyHypometh 1.0000e+00 9.5874e-01 insignificant 9.9227e-01 3.9507e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0836717 1.0286e-02 lowCoverage 3.7291e-01 lowCoverage 0.794872 0.647849 0.1500547 4 0.739222 0.612013 0.1272087 2.8466e-06 9.9894e-01 lowCoverage 4.7443e-05 1.0000e+00 lowCoverage 4.9299e-05 1.0000e+00 lowCoverage 1.1738e-03 1.000000 lowCoverage 0.1733281 8.2272e-03 lowCoverage 1.3944e-01 lowCoverage 0.7948718 0.7737003 0.0245842 4 0.739222 0.722436 0.01678591 3.4029e-01 7.8894e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 5.5555e-01 8.1691e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 0.0114714 0.75625461 lowCoverage 1.00000 lowCoverage 0.6478495 0.7737003 -0.1269317 4 0.612013 0.722436 -0.1104228 9.9875e-01 1.2222e-03 lowCoverage 1.0000000 1.8519e-02 lowCoverage 0.9997524 4.9237e-04 lowCoverage 1.0000 1.6412e-02 lowCoverage -0.1618567 1.1309e-02 lowCoverage 2.1337e-01 lowCoverage chr8 9067450 9068450 29144 PPP1R3B ENSG00000173281 0.753006 477 15 0.5787957 331 16 0.6280766 214 14 0.848753 336 15 0.81491 142 12 0.725266 593 14 0.6682504 240 12 0.657868 256 17 0.7095272 259 12 0.789147 217 13 0.7170984 355 14 0.6579868 176 10 0.692248 214 11 0.6814426 125 10 0.781705 245 15 0.6484417 138 12 0.678421 797 10 0.795981 288 14 0.691545 241 14 0.823218 396 14 0.739126 111 9 0.789746 139 12 0.7229731 233 15 0.678843 162 13 0.835030 144 13 0.782957 365 14 0.737574 156 10 0.676738 141 8 0.75771 231 17 0.7236008 328 18 0.7338069 398 14 0.788590 457 15 0.470428 220 12 0.4793267 220 14 0.5973328 215 13 0.5362674 101 7 0.5968909 211 16 0.648689 367 14 0.728905 447 15 0.827922 441 15 0.865808 362 15 0.800289 408 15 0.864917 471 16 0.8291544 0.788039 0.7189418 0.834194 0.809012 0.8106109 0.7930210 0.7648624 0.7653692 0.8389128 0.8004519 0.7510512 0.8506305 0.8173223 0.8588466 0.7671934 0.826166 0.8761516 0.8001928 0.8269385 0.768689 0.7898462 0.7986016 0.811387 0.843312 0.852374 0.7823624 0.7207334 0.802192 0.8328215 0.7864467 0.8162670 0.5911432 0.5791735 0.69433378 0.5894560 0.6342033 0.7220405 0.819329 0.838078 0.8435230 0.817618 0.8650516 11 0.7983444 0.796859 -0.00502887 14 0.695466 0.730919 -0.0354531 0.9266403 0.42411067 insignificant 1 1.00000 insignificant 0.959243 0.25648753 insignificant 1 1.00000 insignificant -0.03013994 0.1629972 insignificant 1.00000 insignificant 0.7985087 0.632684 0.1522425 12 0.714544 0.540641 0.17390298 1.0306e-34 9.9999e-01 weaklyHypermeth 1.0306e-32 1.0000e+00 weaklyHypermeth 1.6687e-07 9.9999e-01 weaklyHypermeth 8.3434e-06 1.0000000 weaklyHypermeth 0.16226181 1.1074e-03 weaklyHypermeth 3.1640e-02 weaklyHypermeth 0.7992041 0.8661343 -3.1814e-02 14 0.745071 0.786516 -4.1445e-02 9.9508e-01 5.8867e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9902e-01 1.3882e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.1004841 1.0842e-02 weaklyHypometh 3.7388e-01 insignificant 0.796432 0.632684 0.1584974 12 0.694226 0.540641 0.1535845 3.9208e-21 9.9999e-01 weaklyHypermeth 3.2674e-19 1.0000e+00 weaklyHypermeth 1.1903e-06 1.0000e+00 weaklyHypermeth 4.9598e-05 1.000000 weaklyHypermeth 0.1924018 4.9469e-04 weaklyHypermeth 1.4991e-02 weaklyHypermeth 0.7972737 0.8661343 -0.0319406 14 0.736506 0.786516 -0.05001022 9.9954e-01 1.8067e-01 insignificant 1.0000e+00 1.00000000 insignificant 9.9021e-01 5.0591e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0703442 0.04717271 weaklyHypometh 0.96271 insignificant 0.6331583 0.8660085 -0.1857468 12 0.566386 0.766184 -0.1997982 1.0000e+00 4.2822e-15 weaklyHypometh 1.0000000 7.1369e-13 weaklyHypometh 1.0000000 1.7163e-05 weaklyHypometh 1.0000 1.1217e-03 weaklyHypometh -0.2627460 7.9514e-05 hypomethylated 7.2286e-03 hypomethylated chr8 10584950 10585950 29163 ENSG00000212433 0.847845 292 6 0.7038148 200 8 0.7534135 154 6 0.887742 249 6 0.60089 156 6 0.859787 333 6 0.7080942 122 6 0.842209 182 6 0.5550520 123 5 0.661890 170 6 0.6494689 323 6 0.6303114 139 5 0.733299 186 6 0.6410995 110 6 0.656012 210 6 0.6488257 102 3 0.246714 60 2 0.582153 322 6 0.712035 350 6 0.708335 208 6 0.568065 98 5 0.841029 111 6 0.5764957 155 6 0.729561 96 6 0.838659 193 6 0.668321 188 6 0.560791 132 6 0.643417 73 4 0.76103 179 6 0.8320938 245 6 0.7890927 195 6 0.705823 189 6 0.476873 161 6 0.4696208 167 6 0.4068471 325 5 0.5632107 142 2 0.3374885 183 6 0.452193 199 6 0.846283 281 6 0.831821 193 5 0.757242 206 6 0.694540 409 6 0.749661 219 6 0.8459977 0.575500 0.6548854 0.822825 0.565703 0.8395825 0.6941242 0.6899298 0.6624441 0.6049573 0.5986135 0.3954668 0.5174326 0.8108037 0.5886348 0.5721856 0.433830 0.6065864 0.6296546 0.6642575 0.688976 0.7651749 0.6975880 0.808175 0.793535 0.776860 0.8090083 0.7413529 0.661654 0.7163449 0.7975365 0.7991495 0.4477748 0.3452637 0.36951155 0.6606382 0.3938356 0.5076908 0.760669 0.723831 0.6712320 0.649877 0.7084244 5 0.6584816 0.784674 -0.07323921 6 0.721179 0.634627 0.0865520 0.9480031 0.00557504 weaklyHypometh 1 0.72704 insignificant 0.909094 0.00551913 weaklyHypometh 1 1.00000 insignificant -0.02808195 0.5255326 insignificant 1.00000 insignificant 0.6585610 0.401869 0.2469798 6 0.761394 0.363561 0.39783284 2.5077e-13 1.0000e+00 hypermethylated 6.5991e-12 1.0000e+00 hypermethylated 9.6912e-05 1.0000e+00 hypermethylated 1.9778e-03 1.0000000 hypermethylated 0.23041071 7.6708e-05 hypermethylated 4.0373e-03 hypermethylated 0.6563843 0.6796636 -3.3700e-02 6 0.661311 0.787352 -1.2604e-01 9.5192e-01 1.4575e-02 weaklyHypometh 1.0000e+00 7.0677e-01 insignificant 9.9766e-01 1.6031e-02 weaklyHypometh 1.0000e+00 8.2400e-01 insignificant -0.0944599 3.9365e-02 weaklyHypometh 8.5577e-01 insignificant 0.787303 0.401869 0.3329698 6 0.689408 0.363561 0.3258471 3.5280e-13 1.0000e+00 hypermethylated 1.1381e-11 1.0000e+00 hypermethylated 1.8247e-07 9.9998e-01 hypermethylated 1.3034e-05 1.000000 hypermethylated 0.2584927 3.8884e-05 hypermethylated 2.5905e-03 hypermethylated 0.7872106 0.6796636 0.0333716 6 0.702403 0.787352 -0.08494928 1.1355e-01 5.6793e-01 insignificant 1.0000e+00 1.00000000 insignificant 1.7161e-01 7.8187e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0663779 0.13493950 insignificant 1.00000 insignificant 0.4013722 0.6796636 -0.2843655 6 0.380834 0.787352 -0.4065186 1.0000e+00 2.4392e-06 hypomethylated 1.0000000 6.8980e-05 hypomethylated 1.0000000 1.8008e-04 hypomethylated 1.0000 8.1855e-03 hypomethylated -0.3248706 2.7147e-05 hypomethylated 2.7147e-03 hypomethylated chr8 10585650 10586650 29164 ENSG00000212433 0.761858 290 5 0.6859737 112 7 0.5384512 90 5 0.852861 208 5 0.52274 110 5 0.871822 241 5 0.6166915 77 5 0.702259 154 5 0.5477273 99 4 0.609481 128 5 0.6157960 248 5 0.5331769 104 4 0.597588 159 5 0.7584492 74 5 0.497085 144 5 0.3710479 99 4 0.120072 58 2 0.521961 300 5 0.546731 238 5 0.607213 155 5 0.648333 58 4 0.743287 115 5 0.5207212 130 5 0.508983 84 5 0.684813 196 5 0.676066 126 5 0.594046 136 5 0.612083 48 3 0.55580 114 5 0.7256503 154 5 0.8157129 110 5 0.732932 183 5 0.274063 139 5 0.2783234 169 5 0.2554348 200 3 0.5865594 147 2 0.1819477 148 5 0.293921 139 5 0.776668 243 5 0.615575 173 4 0.618214 188 5 0.568341 378 5 0.661128 190 5 0.7671125 0.483171 0.4753659 0.753950 0.463490 0.8139108 0.5547548 0.5964345 0.5567125 0.4377927 0.5185100 0.2297696 0.2628095 0.7269020 0.4036380 0.3248308 0.340261 0.4374398 0.4899673 0.4833307 0.631806 0.6770717 0.6134985 0.582922 0.676601 0.646862 0.7049465 0.6924469 0.536986 0.5673506 0.6921276 0.7500018 0.2312748 0.0399687 0.10465513 0.6417514 0.1576380 0.3793305 0.699539 0.591961 0.5064038 0.510282 0.5925973 4 0.5411269 0.680661 -0.08757453 5 0.722497 0.636461 0.0860362 0.9105501 0.01289088 weaklyHypometh 1 1.00000 insignificant 0.726853 0.00938762 weaklyHypometh 1 1.00000 insignificant -0.05758638 0.2235982 lowCoverage 1.00000 lowCoverage 0.5411269 0.254777 0.2987345 5 0.722497 0.259916 0.46258143 1.7592e-12 1.0000e+00 hypermethylated 4.2908e-11 1.0000e+00 hypermethylated 6.6408e-05 1.0000e+00 hypermethylated 1.4437e-03 1.0000000 hypermethylated 0.28224079 2.1916e-03 lowCoverage 5.2181e-02 lowCoverage 0.5370007 0.6109215 -3.8102e-02 5 0.579803 0.546432 3.3371e-02 6.7776e-01 3.3601e-02 weaklyHypometh 1.0000e+00 8.8424e-01 insignificant 9.5397e-01 2.8868e-02 weaklyHypometh 1.0000e+00 9.6767e-01 insignificant -0.0540361 3.1019e-01 lowCoverage 1.0000e+00 lowCoverage 0.680661 0.254777 0.4184424 5 0.636461 0.259916 0.3765452 1.1594e-12 9.9998e-01 hypermethylated 3.3198e-11 1.0000e+00 hypermethylated 7.6892e-07 9.9994e-01 hypermethylated 3.4951e-05 1.000000 hypermethylated 0.3398272 8.8731e-04 lowCoverage 2.4051e-02 lowCoverage 0.6783708 0.6109215 0.0362606 5 0.616323 0.546432 0.06989157 6.8063e-02 7.5042e-01 insignificant 1.0000e+00 1.00000000 insignificant 1.1883e-01 9.2777e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0035503 0.93864017 lowCoverage 1.00000 lowCoverage 0.2524168 0.6109215 -0.3393579 5 0.210970 0.546432 -0.3354616 1.0000e+00 9.8257e-08 hypomethylated 1.0000000 3.3882e-06 hypomethylated 1.0000000 3.3049e-04 hypomethylated 1.0000 1.3219e-02 hypomethylated -0.3362769 1.0298e-03 lowCoverage 4.2908e-02 lowCoverage chr8 11351450 11352450 29179 FAM167A ENSG00000154319 0.865976 281 6 0.6612903 62 2 0.3600000 51 2 0.578894 88 2 0.75833 22 2 0.782051 57 2 0.8000000 20 2 0.580702 32 2 0.5158730 33 2 0.809607 80 6 0.7406336 101 5 0.8437500 24 2 0.805430 43 2 0.9718182 50 4 0.890275 116 6 0.3000000 6 1 0.444444 13 1 0.695054 96 2 0.645572 179 6 0.744048 54 2 0.912500 37 2 0.782456 34 2 0.7524631 43 2 0.900000 21 2 0.911272 63 4 0.873478 268 6 0.661650 38 2 0.843434 20 2 0.76471 34 2 0.8266667 40 2 0.9004329 51 2 0.809790 81 2 0.615079 39 2 0.2222222 26 2 0.6926316 197 5 0.4807692 21 2 0.6525974 29 2 0.281106 52 2 0.885553 231 6 0.795139 75 2 0.782343 57 2 0.793137 61 2 0.568056 102 2 0.8455150 0.664666 0.5525581 0.871614 0.769380 0.7901014 0.8000000 0.8730722 0.7779623 0.6413114 0.8175941 0.8502907 0.8082711 0.8363525 0.8035182 0.2790698 0.689922 0.7379345 0.5993658 0.7552602 0.863953 0.7929825 0.7601100 0.893023 0.795866 0.764828 0.7513417 0.8480150 0.772914 0.8341085 0.8560858 0.8179867 0.6153562 0.3217054 0.71285190 0.4794275 0.6569012 0.2907513 0.820044 0.796350 0.7832574 0.785682 0.5797804 2 0.8181818 0.850685 -0.04646087 3 0.720313 0.904937 -0.1846242 0.9992130 0.07296749 lowCoverage 1 1.00000 lowCoverage 0.999418 0.02612027 lowCoverage 1 1.00000 lowCoverage -0.13854982 0.0054222 lowCoverage 1.00000 lowCoverage 0.8134441 0.554945 0.2501244 2 0.691555 0.517661 0.17389455 5.3572e-09 6.8746e-01 lowCoverage 9.5663e-08 1.0000e+00 lowCoverage 2.8805e-02 8.8284e-01 lowCoverage 3.3135e-01 1.0000000 lowCoverage 0.19895333 6.1315e-02 lowCoverage 7.5698e-01 lowCoverage 0.8240343 0.8041825 9.1940e-03 5 0.840365 0.854961 -1.4596e-02 3.8645e-01 5.9321e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.9227e-01 6.6406e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0751579 2.8413e-01 lowCoverage 1.0000e+00 lowCoverage 0.843705 0.554945 0.2716798 2 0.893366 0.517661 0.3757058 1.2967e-07 6.7305e-01 lowCoverage 2.4467e-06 1.0000e+00 lowCoverage 3.9694e-03 9.9683e-01 lowCoverage 6.0142e-02 1.000000 lowCoverage 0.3375032 7.7051e-03 lowCoverage 1.3518e-01 lowCoverage 0.8504801 0.8041825 0.0600997 3 0.889093 0.854961 0.03413239 2.0989e-02 6.8736e-01 lowCoverage 6.1731e-01 1.00000000 lowCoverage 2.4573e-01 9.5555e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 0.0633919 0.31356458 lowCoverage 1.00000 lowCoverage 0.5580110 0.8031496 -0.2109731 2 0.621193 0.859286 -0.2380932 9.9971e-01 5.7611e-02 lowCoverage 1.0000000 4.9665e-01 lowCoverage 0.9808035 1.0041e-01 lowCoverage 1.0000 9.7443e-01 lowCoverage -0.2741112 2.1492e-02 lowCoverage 3.3065e-01 lowCoverage chr8 11748050 11749050 29187 FDFT1 ENSG00000079459 0.906918 200 6 0.7089503 231 8 0.6788175 167 8 0.924956 202 6 0.86555 97 8 0.813833 159 7 0.8414691 206 8 0.631952 158 8 0.7152359 150 6 0.742560 91 8 0.8637596 264 8 0.7471732 124 8 0.721478 189 8 0.8891941 66 5 0.805678 157 8 0.6533730 117 4 0.541923 109 4 0.642980 137 6 0.688573 146 8 0.797741 222 8 0.913488 50 4 0.683150 66 5 0.7123706 102 8 0.761184 88 8 0.691100 177 5 0.782166 170 8 0.752399 90 5 0.797524 65 4 0.82206 207 8 0.7623817 279 8 0.7359548 197 8 0.896984 125 8 0.667929 188 8 0.7354827 223 8 0.5439815 99 5 0.6904614 114 6 0.4128783 158 8 0.709966 228 8 0.605475 214 6 0.687295 208 8 0.752568 139 6 0.702163 183 6 0.767592 138 6 0.8719978 0.779123 0.7725010 0.890207 0.889030 0.9045364 0.8871124 0.7693633 0.8823248 0.8403467 0.8874470 0.8572089 0.8545433 0.8575589 0.8978620 0.8915425 0.851099 0.7749002 0.7402202 0.8887425 0.937024 0.9131359 0.8097968 0.830378 0.826270 0.844136 0.8133231 0.9272872 0.903373 0.8596296 0.8313858 0.9188942 0.8951007 0.9450319 0.70656961 0.7849786 0.7214187 0.8813976 0.862950 0.832972 0.8671520 0.817199 0.7908482 2 0.7397303 0.767946 -0.03447518 8 0.726869 0.723337 0.0035323 0.6347832 0.11028084 insignificant 1 1.00000 insignificant 0.950118 0.26922161 insignificant 1 1.00000 insignificant -0.01679111 0.5977249 insignificant 1.00000 insignificant 0.7394984 0.570862 0.1215193 8 0.654182 0.574656 0.07952665 1.4135e-03 3.6751e-01 weaklyHypermeth 1.5705e-02 1.0000e+00 weaklyHypermeth 1.0376e-02 6.7432e-01 weaklyHypermeth 1.4615e-01 1.0000000 insignificant 0.13232262 4.8295e-02 weaklyHypermeth 6.2721e-01 insignificant 0.7398808 0.8286039 1.1943e-02 6 0.755228 0.699151 5.6077e-02 1.0109e-01 7.1425e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.9630e-02 8.7341e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0560872 1.5959e-01 insignificant 1.0000e+00 insignificant 0.767946 0.572565 0.1501700 8 0.723337 0.638506 0.0848306 2.0707e-07 4.9514e-01 weaklyHypermeth 3.7648e-06 1.0000e+00 weaklyHypermeth 1.2073e-02 8.6339e-01 weaklyHypermeth 1.4932e-01 1.000000 insignificant 0.1491137 3.0844e-02 weaklyHypermeth 4.0584e-01 insignificant 0.7687539 0.8286039 0.0244379 6 0.772087 0.699151 0.07293613 1.1091e-02 8.6753e-01 weaklyHypermeth 3.6970e-01 1.00000000 insignificant 8.5529e-02 9.7333e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0728784 0.07204853 insignificant 1.00000 insignificant 0.5721393 0.8276644 0.0063978 6 0.582951 0.621468 -0.0385170 7.6866e-01 3.5089e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.6627655 7.5874e-01 insignificant 1.0000 1.0000e+00 insignificant -0.0762354 2.2801e-01 insignificant 1.0000e+00 insignificant chr8 11748550 11749550 29188 FDFT1 ENSG00000079459 0.931818 92 4 0.6652705 137 6 0.6276126 105 6 0.928704 112 4 0.87963 71 6 0.918701 87 5 0.8149577 122 6 0.556335 87 6 0.7929654 74 4 0.696098 74 6 0.8542769 181 6 0.7229853 85 6 0.663360 125 6 0.8269231 52 4 0.778979 96 6 0.6800595 71 2 0.175758 76 2 0.563829 78 4 0.653846 108 6 0.753238 118 6 0.923611 32 2 0.577534 56 4 0.6728914 62 6 0.742690 55 6 0.742033 127 4 0.768529 129 6 0.727849 38 3 0.810256 30 2 0.79978 142 6 0.7060908 166 6 0.6791710 145 6 0.881876 70 6 0.557239 148 6 0.6538462 159 6 0.4527778 98 5 0.6300000 84 4 0.4119666 97 6 0.647487 182 6 0.513484 110 4 0.631538 124 6 0.675817 72 4 0.615484 121 4 0.739107 77 4 0.9044421 0.710226 0.6943902 0.889476 0.974116 0.9101156 0.8409275 0.6681951 0.9125369 0.7958378 0.8705357 0.8893919 0.8012266 0.8038261 0.9150100 0.8710430 0.797889 0.6955759 0.7274476 0.8635778 0.989110 0.8154138 0.7670189 0.840311 0.725685 0.860223 0.7981740 0.9597902 0.883050 0.7703216 0.7340371 0.9115663 0.7770891 0.9117133 0.48550234 0.7263799 0.6221296 0.8672439 0.794332 0.805112 0.7985060 0.702108 0.7528223 0 0.6591492 0.702471 -0.03953806 6 0.717350 0.733351 -0.0160011 0.4659213 0.19021629 insignificant 1 1.00000 insignificant 0.916919 0.25182091 insignificant 1 1.00000 insignificant -0.02842566 0.5523007 lowCoverage 1.00000 lowCoverage 0.6591492 0.470665 0.1877300 6 0.717350 0.569578 0.14777164 3.0977e-05 6.1918e-01 weaklyHypermeth 4.1303e-04 1.0000e+00 weaklyHypermeth 3.4493e-04 7.1796e-01 weaklyHypermeth 6.3225e-03 1.0000000 weaklyHypermeth 0.16538128 1.2345e-02 weaklyHypermeth 2.0963e-01 insignificant 0.6591492 0.7813121 5.0151e-02 4 0.717350 0.632508 8.4842e-02 3.2706e-02 9.5391e-01 lowCoverage 8.3863e-01 1.0000e+00 lowCoverage 1.6577e-02 9.9515e-01 lowCoverage 5.9205e-01 1.0000e+00 lowCoverage 0.0891815 1.1908e-01 lowCoverage 1.0000e+00 lowCoverage 0.702471 0.470665 0.2247463 6 0.733351 0.569578 0.1637727 8.0515e-09 7.1962e-01 hypermethylated 1.7892e-07 1.0000e+00 hypermethylated 1.5830e-03 9.5203e-01 weaklyHypermeth 2.7896e-02 1.000000 weaklyHypermeth 0.1938069 3.8983e-03 lowCoverage 8.2943e-02 lowCoverage 0.7024715 0.7813121 0.0456614 4 0.733351 0.632508 0.10084275 6.0450e-03 9.5585e-01 lowCoverage 2.1589e-01 1.00000000 lowCoverage 4.0445e-02 9.9845e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 0.1176072 0.03230097 lowCoverage 0.71780 lowCoverage 0.4700521 0.7797619 0.0025387 4 0.488210 0.542150 -0.0539400 8.1230e-01 2.1281e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage 0.5918666 6.6203e-01 lowCoverage 1.0000 1.0000e+00 lowCoverage -0.0761998 2.1151e-01 lowCoverage 1.0000e+00 lowCoverage chr8 11756250 11757250 29189 FDFT1 ENSG00000079459 0.625850 142 6 0.5205334 133 6 0.6352041 37 5 0.713916 117 5 0.60417 36 5 0.694589 65 6 0.3571429 66 5 0.832748 72 6 0.6698413 56 6 0.591738 55 6 0.7235146 106 6 0.8285714 23 3 0.832247 94 6 0.7268519 43 5 0.638685 71 6 0.7857143 22 0 0.857143 12 0 0.790314 191 5 0.615646 61 6 0.627841 66 6 0.875000 26 1 0.800000 13 0 0.5995671 77 3 0.573810 48 6 0.667930 85 5 0.737687 70 6 0.774603 45 6 0.875000 8 0 0.65883 110 6 0.8445685 65 6 0.6178721 64 6 0.603349 52 6 0.574865 97 6 0.5767395 76 5 0.7782588 90 6 1.0000000 3 0 0.5869048 78 6 0.713270 67 6 0.688095 118 3 0.656780 127 5 0.821634 105 6 0.652273 102 3 0.727931 75 5 0.7069841 0.703520 0.7388095 0.832094 0.633333 0.7931111 0.6219048 0.8055755 0.7877037 0.8877607 0.8318770 0.8400000 0.8570883 0.7425926 0.7450061 0.7133333 0.786667 0.7795349 0.7193651 0.8342424 0.856667 0.7765003 0.7331313 0.657778 0.755219 0.788092 0.7710476 0.8231514 0.784123 0.8014365 0.6924440 0.6861050 0.6666696 0.6145976 0.76864198 0.8840009 0.6735873 0.7215773 0.806444 0.741371 0.8050246 0.762486 0.7890560 0 0.7638225 0.758673 0.00474137 6 0.620232 0.721047 -0.1008150 0.4531806 0.61892387 insignificant 1 1.00000 insignificant 0.774288 0.60490872 insignificant 1 1.00000 insignificant -0.03540549 0.4130168 lowCoverage 1.00000 lowCoverage 0.7650685 0.666667 0.1069320 6 0.671123 0.624813 0.04631028 1.1019e-05 9.9155e-01 weaklyHypermeth 1.5742e-04 1.0000e+00 weaklyHypermeth 1.7476e-01 9.7849e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.02139339 7.7997e-01 lowCoverage 1.0000e+00 lowCoverage 0.7656357 0.7703985 8.7923e-04 5 0.607411 0.666376 -5.8964e-02 6.8805e-01 6.6410e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4258e-01 6.7628e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0257296 5.4769e-01 lowCoverage 1.0000e+00 lowCoverage 0.757943 0.666667 0.0995016 6 0.651309 0.624813 0.0264957 1.6521e-03 1.0000e+00 weaklyHypermeth 1.8357e-02 1.0000e+00 weaklyHypermeth 1.9077e-01 9.8893e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0140121 8.5799e-01 lowCoverage 1.0000e+00 lowCoverage 0.7594554 0.7699620 -0.0035848 5 0.745608 0.629306 0.11630131 9.1742e-01 8.4177e-01 insignificant 1.0000e+00 1.00000000 insignificant 9.2699e-01 6.9807e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0096759 0.83346767 lowCoverage 1.00000 lowCoverage 0.6658537 0.7709924 -0.1066048 5 0.571215 0.666251 -0.0950363 9.9994e-01 4.0007e-03 weaklyHypometh 1.0000000 5.1258e-02 weaklyHypometh 0.9966678 2.0977e-01 insignificant 1.0000 1.0000e+00 insignificant -0.0043362 9.5555e-01 lowCoverage 1.0000e+00 lowCoverage chr8 11756650 11757650 29190 FDFT1 ENSG00000079459 0.625850 142 6 0.5205334 133 6 0.6352041 37 5 0.713916 117 5 0.60417 36 5 0.694589 65 6 0.3571429 66 5 0.832748 72 6 0.6698413 56 6 0.591738 55 6 0.7235146 106 6 0.8285714 23 3 0.832247 94 6 0.7268519 43 5 0.638685 71 6 0.7857143 22 0 0.857143 12 0 0.790314 191 5 0.615646 61 6 0.627841 66 6 0.875000 26 1 0.800000 13 0 0.5995671 77 3 0.573810 48 6 0.667930 85 5 0.737687 70 6 0.774603 45 6 0.875000 8 0 0.65883 110 6 0.8445685 65 6 0.6178721 64 6 0.603349 52 6 0.574865 97 6 0.5767395 76 5 0.7782588 90 6 1.0000000 3 0 0.5869048 78 6 0.713270 67 6 0.688095 118 3 0.656780 127 5 0.821634 105 6 0.652273 102 3 0.727931 75 5 0.7069841 0.703520 0.7388095 0.832094 0.633333 0.7931111 0.6219048 0.8055755 0.7877037 0.8877607 0.8318770 0.8400000 0.8570883 0.7425926 0.7450061 0.7133333 0.786667 0.7795349 0.7193651 0.8342424 0.856667 0.7765003 0.7331313 0.657778 0.755219 0.788092 0.7710476 0.8231514 0.784123 0.8014365 0.6924440 0.6861050 0.6666696 0.6145976 0.76864198 0.8840009 0.6735873 0.7215773 0.806444 0.741371 0.8050246 0.762486 0.7890560 0 0.7638225 0.758673 0.00474137 6 0.620232 0.721047 -0.1008150 0.4531806 0.61892387 insignificant 1 1.00000 insignificant 0.774288 0.60490872 insignificant 1 1.00000 insignificant -0.03540549 0.4130168 lowCoverage 1.00000 lowCoverage 0.7650685 0.666667 0.1069320 6 0.671123 0.624813 0.04631028 1.1019e-05 9.9155e-01 weaklyHypermeth 1.5742e-04 1.0000e+00 weaklyHypermeth 1.7476e-01 9.7849e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.02139339 7.7997e-01 lowCoverage 1.0000e+00 lowCoverage 0.7656357 0.7703985 8.7923e-04 5 0.607411 0.666376 -5.8964e-02 6.8805e-01 6.6410e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4258e-01 6.7628e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0257296 5.4769e-01 lowCoverage 1.0000e+00 lowCoverage 0.757943 0.666667 0.0995016 6 0.651309 0.624813 0.0264957 1.6521e-03 1.0000e+00 weaklyHypermeth 1.8357e-02 1.0000e+00 weaklyHypermeth 1.9077e-01 9.8893e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0140121 8.5799e-01 lowCoverage 1.0000e+00 lowCoverage 0.7594554 0.7699620 -0.0035848 5 0.745608 0.629306 0.11630131 9.1742e-01 8.4177e-01 insignificant 1.0000e+00 1.00000000 insignificant 9.2699e-01 6.9807e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0096759 0.83346767 lowCoverage 1.00000 lowCoverage 0.6658537 0.7709924 -0.1066048 5 0.571215 0.666251 -0.0950363 9.9994e-01 4.0007e-03 weaklyHypometh 1.0000000 5.1258e-02 weaklyHypometh 0.9966678 2.0977e-01 insignificant 1.0000 1.0000e+00 insignificant -0.0043362 9.5555e-01 lowCoverage 1.0000e+00 lowCoverage chr8 11772450 11773450 29193 CTSB ENSG00000164733 0.781926 187 6 0.7557079 175 6 0.7251162 82 6 0.801850 174 6 0.84582 116 6 0.729075 170 6 0.8125784 94 6 0.747856 156 6 0.7132915 88 6 0.764769 74 6 0.8229400 245 7 0.7015152 38 5 0.763639 133 5 0.8081330 129 6 0.630660 88 5 0.8333333 32 4 0.741069 200 2 0.732484 203 6 0.717018 123 6 0.705236 179 6 0.773148 32 2 0.584249 44 3 0.7638955 86 6 0.836508 73 6 0.836996 71 6 0.749121 168 6 0.703571 71 5 0.592308 57 5 0.78813 129 6 0.8016638 213 6 0.8268006 158 6 0.715930 197 6 0.231696 156 6 0.3872294 67 6 0.5709046 105 3 0.4702381 23 3 0.3703219 198 6 0.278629 221 6 0.735626 118 5 0.883150 191 6 0.802892 242 6 0.805808 156 6 0.800413 216 6 0.7858968 0.773588 0.7029411 0.819131 0.859874 0.7978622 0.7997546 0.7958473 0.7199687 0.7910046 0.8065463 0.7428118 0.7568624 0.7869605 0.7644839 0.8837209 0.761035 0.7408953 0.7704918 0.8201084 0.833333 0.5782648 0.7992547 0.830879 0.817904 0.755310 0.6922481 0.6385063 0.812698 0.8358286 0.8383745 0.7620021 0.3011255 0.3988976 0.37565633 0.3520493 0.4550759 0.3091043 0.779759 0.886828 0.7985840 0.821054 0.7845190 3 0.7791434 0.799846 -0.01150792 6 0.768784 0.793271 -0.0244867 0.8977300 0.27218918 insignificant 1 1.00000 insignificant 0.739078 0.24452983 insignificant 1 1.00000 insignificant 0.00900700 0.7480593 insignificant 1.00000 insignificant 0.7791434 0.368831 0.4170204 6 0.768784 0.282496 0.48628768 6.0319e-37 9.9896e-01 hypermethylated 6.7021e-35 1.0000e+00 hypermethylated 9.6491e-08 9.9554e-01 hypermethylated 5.0785e-06 1.0000000 hypermethylated 0.37186401 5.2440e-04 hypermethylated 1.6916e-02 hypermethylated 0.7791434 0.8093174 -5.0466e-02 6 0.768784 0.829719 -6.0935e-02 9.5175e-01 3.2378e-02 weaklyHypometh 1.0000e+00 8.7509e-01 insignificant 8.9733e-01 3.6371e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0488774 1.1005e-01 insignificant 1.0000e+00 insignificant 0.799846 0.368831 0.4629274 6 0.793271 0.282496 0.5107744 7.1563e-21 9.9872e-01 hypermethylated 5.5049e-19 1.0000e+00 hypermethylated 2.1917e-07 9.8808e-01 hypermethylated 1.3698e-05 1.000000 hypermethylated 0.3628570 2.6563e-04 hypermethylated 8.8543e-03 hypermethylated 0.7998460 0.8093174 -0.0306583 6 0.793271 0.829719 -0.03644844 9.7563e-01 2.7109e-01 insignificant 1.0000e+00 1.00000000 insignificant 9.3233e-01 2.1066e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0578844 0.11473293 insignificant 1.00000 insignificant 0.3688312 0.8093174 -0.4308057 6 0.282496 0.829719 -0.5472229 1.0000e+00 5.9229e-15 hypomethylated 1.0000000 8.4613e-13 hypomethylated 0.9999993 5.9284e-06 hypomethylated 1.0000 4.9404e-04 hypomethylated -0.4207414 1.3538e-04 hypomethylated 9.7313e-03 hypomethylated chr8 16656750 16657750 29249 MSR1 ENSG00000038945 0.459736 500 5 0.3529658 797 5 0.2731765 375 5 0.438246 436 5 0.37024 357 5 0.627801 635 5 0.4271861 345 5 0.561196 445 5 0.4535745 448 5 0.314451 478 5 0.4247572 457 5 0.3966156 296 5 0.415924 369 5 0.5045572 274 5 0.478939 557 5 0.4080573 115 5 0.745994 130 5 0.408726 583 5 0.733266 461 5 0.535487 431 5 0.450491 107 5 0.426925 246 5 0.4806503 205 5 0.514095 233 5 0.547512 125 5 0.580526 677 5 0.278347 474 5 0.306920 130 5 0.30858 540 5 0.5231995 891 5 0.4512879 790 5 0.423563 405 5 0.309080 486 5 0.0505615 247 5 0.3042704 524 4 0.3000000 28 4 0.2043375 414 5 0.571879 571 5 0.540963 502 5 0.517369 378 5 0.456989 495 5 0.606932 379 5 0.538514 364 5 0.4156824 0.348193 0.2942248 0.391152 0.352949 0.5896204 0.3774810 0.5344346 0.4205240 0.3709190 0.3596668 0.4132161 0.5077773 0.4743768 0.5506948 0.4275357 0.933262 0.3851805 0.8123281 0.4883901 0.311143 0.4170126 0.4599109 0.378354 0.566708 0.563540 0.2698324 0.2480204 0.286752 0.5221744 0.5277021 0.3917897 0.2899489 0.0590426 0.27955323 0.3146982 0.1939853 0.6240264 0.534114 0.501219 0.4289072 0.582464 0.5053318 5 0.4655436 0.444329 0.01696291 5 0.421043 0.438071 -0.0170279 0.4852252 0.93206969 insignificant 1 1.00000 insignificant 0.299736 0.97940564 insignificant 1 1.00000 insignificant 0.02553685 0.5258575 insignificant 1.00000 insignificant 0.4658649 0.332159 0.1274914 5 0.489461 0.329910 0.15955057 2.0641e-05 9.9876e-01 weaklyHypermeth 2.8668e-04 1.0000e+00 weaklyHypermeth 1.8270e-05 9.9956e-01 weaklyHypermeth 4.6847e-04 1.0000000 weaklyHypermeth 0.17652341 5.2070e-02 lowCoverage 6.6756e-01 lowCoverage 0.4658649 0.5103872 -4.4446e-02 5 0.489461 0.530937 -4.1476e-02 7.9556e-01 3.5661e-02 weaklyHypometh 1.0000e+00 8.8495e-01 insignificant 9.2238e-01 8.4312e-03 weaklyHypometh 1.0000e+00 6.2984e-01 insignificant -0.0656087 9.3003e-02 insignificant 1.0000e+00 insignificant 0.444168 0.332159 0.1114849 5 0.463300 0.329910 0.1333897 1.7064e-04 9.9744e-01 weaklyHypermeth 2.1935e-03 1.0000e+00 weaklyHypermeth 7.8612e-04 9.9636e-01 weaklyHypermeth 1.6043e-02 1.000000 weaklyHypermeth 0.1509866 8.5857e-02 lowCoverage 9.2319e-01 lowCoverage 0.4441677 0.5103872 -0.0629347 5 0.463300 0.530937 -0.06763718 9.7587e-01 3.4724e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant 9.7073e-01 1.2532e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.0911456 0.02897354 weaklyHypometh 0.69022 insignificant 0.3321586 0.5103872 -0.1739015 5 0.329910 0.530937 -0.2010268 9.9977e-01 8.6070e-05 weaklyHypometh 1.0000000 1.7214e-03 weaklyHypometh 0.9999955 3.7688e-04 weaklyHypometh 1.0000 1.3519e-02 weaklyHypometh -0.2421321 1.5919e-02 lowCoverage 2.7928e-01 lowCoverage chr8 17670750 17671750 29271 ENSG00000212280 0.605000 144 9 0.6772026 115 9 0.7319024 54 4 0.772727 116 9 0.71383 121 9 0.852071 83 6 0.6421429 66 7 0.753990 83 9 0.8173160 70 9 0.641534 65 7 0.5620306 186 9 0.9259259 36 5 0.800040 91 9 0.7845506 83 7 0.817308 67 7 0.7222222 60 3 0.797143 87 3 0.794353 137 9 0.855556 37 2 0.907407 31 4 0.884921 40 4 0.642857 14 0 0.7115010 89 6 0.632937 28 2 0.758755 83 7 0.829254 76 6 0.633333 57 6 0.750000 16 0 0.84074 60 5 0.8201058 67 4 0.8843939 71 6 0.501896 80 6 0.717632 110 9 0.6980057 61 4 0.5214286 79 9 1.0000000 3 0 0.7875247 69 5 0.733631 80 6 0.820877 80 9 0.745450 114 9 0.787139 110 9 0.701235 67 5 0.714815 80 6 0.8452640 0.730035 0.7310606 0.799989 0.738780 0.8691923 0.6217532 0.7702402 0.8562574 0.6409632 0.7609138 0.9280303 0.7358204 0.7580605 0.8451705 0.7585227 0.822067 0.8640582 0.8403409 0.8655303 0.907468 0.6996023 0.7191388 0.638470 0.802789 0.875364 0.7342105 0.7709109 0.826136 0.8099297 0.8453340 0.7673160 0.6973755 0.7004038 0.60519481 0.7734744 0.8069712 0.8471997 0.845056 0.727386 0.8060481 0.695707 0.7837121 0 0.7696305 0.779736 0.00292266 6 0.700498 0.650124 0.0503747 0.7826707 0.72088375 insignificant 1 1.00000 insignificant 0.902964 0.45253946 insignificant 1 1.00000 insignificant 0.01782154 0.6667449 lowCoverage 1.00000 lowCoverage 0.7700751 0.699005 0.0768512 6 0.754383 0.687624 0.06675880 1.2057e-02 9.9077e-01 weaklyHypermeth 1.0961e-01 1.0000e+00 insignificant 3.4938e-01 9.2829e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.01567574 8.2216e-01 insignificant 1.0000e+00 insignificant 0.7703264 0.7888889 6.7023e-05 9 0.776172 0.774125 2.0473e-03 6.3847e-01 6.8586e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.7066e-01 8.1852e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0048097 8.7990e-01 insignificant 1.0000e+00 insignificant 0.780882 0.699005 0.0769680 6 0.700133 0.687624 0.0125091 1.3042e-02 9.4244e-01 weaklyHypermeth 1.1856e-01 1.0000e+00 insignificant 9.3220e-02 9.5638e-01 insignificant 8.7943e-01 1.000000 insignificant -0.0021458 9.7694e-01 lowCoverage 1.0000e+00 lowCoverage 0.7853949 0.7888889 0.0062035 6 0.789081 0.774125 0.01495651 4.6315e-01 8.6588e-01 insignificant 1.0000e+00 1.00000000 insignificant 4.8109e-02 8.8583e-01 weaklyHypermeth 1.0000e+00 1.000000 insignificant -0.0130119 0.75561449 lowCoverage 1.00000 lowCoverage 0.7036082 0.7888889 -0.0715158 6 0.715457 0.774125 -0.0586678 9.7701e-01 3.9633e-02 weaklyHypometh 1.0000000 3.5706e-01 insignificant 0.7937927 1.7871e-01 insignificant 1.0000 1.0000e+00 insignificant -0.0108661 8.7639e-01 insignificant 1.0000e+00 insignificant chr8 19169450 19170450 29316 PSD3 ENSG00000156011 0.076072 405 8 0.1056910 161 8 0.1369593 145 8 0.042771 301 8 0.15734 125 8 0.101672 379 8 0.0745713 175 8 0.086624 164 8 0.0517309 251 8 0.095495 167 8 0.0800295 154 8 0.0803053 150 8 0.026440 216 8 0.0416667 44 4 0.053970 177 8 0.0740741 48 5 0.073693 174 8 0.051245 395 8 0.085417 132 7 0.134019 320 8 0.196032 72 9 0.110772 249 8 0.1912278 181 8 0.130769 125 9 0.034673 141 8 0.035992 236 8 0.036400 152 8 0.084223 72 8 0.06445 148 8 0.1461438 253 8 0.0774565 284 8 0.157214 293 8 0.022046 160 8 0.0111111 96 8 0.0000000 92 2 0.0000000 60 7 0.0038462 160 8 0.113889 240 8 0.074042 601 8 0.021546 362 8 0.015825 411 8 0.024930 410 8 0.149482 469 8 0.0877617 0.056867 0.1432432 0.048967 0.070202 0.1164196 0.0923122 0.0983224 0.0660037 0.0990212 0.0910759 0.0810008 0.0289926 0.0714678 0.0601338 0.0860595 0.075867 0.0599076 0.0458481 0.0436681 0.202484 0.0134675 0.1958259 0.164107 0.035557 0.045436 0.0443772 0.0540046 0.072067 0.0398290 0.0782889 0.1605865 0.0219359 0.0106101 0.00746819 0.0000000 0.0047949 0.0033820 0.021495 0.021507 0.0161984 0.028039 0.0436694 8 0.0778839 0.089302 -0.01164162 8 0.087478 0.106686 -0.0192084 0.9270341 0.16345241 insignificant 1 1.00000 insignificant 0.697130 0.46300137 insignificant 1 1.00000 insignificant -0.02395674 0.2164967 insignificant 1.00000 insignificant 0.0778839 0.011139 0.0712370 8 0.087478 0.046191 0.04128712 2.9164e-09 9.9769e-01 weaklyHypermeth 5.4008e-08 1.0000e+00 weaklyHypermeth 6.5111e-09 9.9999e-01 weaklyHypermeth 4.0694e-07 1.0000000 weaklyHypermeth 0.05634067 2.4372e-02 weaklyHypermeth 3.6376e-01 insignificant 0.0778839 0.0270750 4.9369e-02 8 0.087478 0.087523 -4.5664e-05 1.0451e-04 9.9907e-01 weaklyHypermeth 4.7502e-03 1.0000e+00 weaklyHypermeth 3.2382e-05 9.9650e-01 weaklyHypermeth 4.0478e-03 1.0000e+00 weaklyHypermeth 0.0243244 4.0176e-01 insignificant 1.0000e+00 insignificant 0.089302 0.011139 0.0799574 8 0.106686 0.046191 0.0604956 1.2200e-05 9.7563e-01 weaklyHypermeth 1.8485e-04 1.0000e+00 weaklyHypermeth 3.4800e-07 9.9925e-01 weaklyHypermeth 1.9333e-05 1.000000 weaklyHypermeth 0.0802974 6.4319e-03 weaklyHypermeth 1.2369e-01 insignificant 0.0893019 0.0270750 0.0591580 8 0.106686 0.087523 0.01916277 1.7249e-03 9.8877e-01 weaklyHypermeth 8.1765e-02 1.00000000 weaklyHypermeth 9.7145e-03 9.6656e-01 weaklyHypermeth 4.2951e-01 1.000000 insignificant 0.0482812 0.15278259 insignificant 1.00000 insignificant 0.0111386 0.0270750 -0.0203129 8 0.046191 0.087523 -0.0413328 9.9591e-01 2.0689e-07 weaklyHypometh 1.0000000 6.8963e-06 weaklyHypometh 0.9998429 7.5039e-06 weaklyHypometh 1.0000 5.7722e-04 weaklyHypometh -0.0320163 3.3528e-01 insignificant 1.0000e+00 insignificant chr8 19525950 19526950 29332 ENSG00000181508 0.813377 260 7 0.5816799 64 4 0.6448052 91 6 0.841544 178 7 0.70981 48 5 0.669865 87 5 0.8391270 81 7 0.806277 52 4 0.6981947 44 4 0.694139 46 4 0.5694862 65 5 0.8702948 44 6 0.773840 44 5 0.8294872 60 7 0.839037 47 5 0.8500000 28 4 1.000000 27 3 0.785638 127 7 0.870370 27 2 0.800965 80 6 0.678061 39 5 0.875000 6 0 0.7423577 239 7 0.545238 25 2 0.492424 30 2 0.650694 45 4 0.787500 29 3 0.864815 37 4 0.87208 60 3 0.7937729 56 4 0.8970588 36 2 0.840621 77 6 0.726190 52 3 0.8230159 41 5 0.7554945 54 5 0.7222222 10 0 0.8572737 43 4 0.746078 68 6 0.834945 286 7 0.811982 252 7 0.857332 331 7 0.836907 161 7 0.834959 213 7 0.8197359 0.596496 0.6133163 0.814255 0.745473 0.7026462 0.8036721 0.7544357 0.6150364 0.6650415 0.6731838 0.8443997 0.7359612 0.8497782 0.8645720 0.8633803 1.000000 0.7744121 0.8356808 0.7919206 0.789487 0.8490539 0.7321975 0.649061 0.681220 0.620599 0.7940141 0.8539906 0.881242 0.7736547 0.8676952 0.8135941 0.7570423 0.8010060 0.80037920 0.7746479 0.7889259 0.7269539 0.788197 0.792127 0.8619687 0.845950 0.8318806 0 0.7740000 0.764359 0.00490350 5 0.778077 0.761012 0.0170651 0.2669294 0.37602779 insignificant 1 1.00000 insignificant 0.298201 0.43930189 insignificant 1 1.00000 insignificant 0.02109505 0.6495360 lowCoverage 1.00000 lowCoverage 0.7740000 0.761194 -0.0042059 4 0.778077 0.783147 -0.00507052 5.5130e-01 1.6652e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.7893e-01 1.1094e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 0.00268426 9.3603e-01 lowCoverage 1.0000e+00 lowCoverage 0.7740000 0.8423170 -5.7444e-02 7 0.778077 0.839501 -6.1425e-02 9.9870e-01 2.0708e-02 weaklyHypometh 1.0000e+00 7.1405e-01 insignificant 9.6014e-01 2.2423e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0608282 2.3578e-02 weaklyHypometh 6.5493e-01 insignificant 0.764359 0.761194 -0.0025761 4 0.761012 0.783147 -0.0221356 6.6335e-01 3.2011e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.7654e-01 3.4431e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage -0.0184108 6.8826e-01 lowCoverage 1.0000e+00 lowCoverage 0.7643594 0.8423170 -0.0611719 5 0.761012 0.839501 -0.07848973 9.9424e-01 4.5245e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant 8.1850e-01 2.6871e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0819233 0.06131743 lowCoverage 1.00000 lowCoverage 0.7611940 0.8423170 -0.0521620 4 0.783147 0.839501 -0.0563541 9.4141e-01 1.8864e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage 0.5293889 7.2999e-01 lowCoverage 1.0000 1.0000e+00 lowCoverage -0.0635125 3.7016e-02 lowCoverage 4.7854e-01 lowCoverage chr8 19732450 19733450 29344 INTS10 ENSG00000104613 0.941757 415 6 0.8966667 131 6 0.8242424 68 6 0.962665 356 6 0.85417 65 6 0.969796 164 6 0.6157407 42 4 0.951310 186 6 0.9639423 90 6 0.962500 43 6 0.9169310 248 6 0.8909091 51 6 0.962656 165 6 0.9871795 132 6 0.962086 107 6 0.5000000 6 0 0.866667 16 1 0.944515 487 6 0.965212 99 6 0.889913 331 6 0.836111 21 2 0.941005 71 6 0.9187364 81 6 0.914835 75 6 0.961538 72 6 0.971141 238 6 0.886806 83 6 0.861111 20 1 0.95417 157 6 0.9668147 332 6 0.9722621 219 6 0.939731 304 6 0.955653 109 6 0.9583333 113 6 1.0000000 370 6 1.0000000 14 0 0.8914603 103 6 0.951573 262 6 0.975170 333 6 0.954269 159 6 0.951674 402 6 0.961415 233 6 0.963840 303 6 0.9405893 0.913846 0.8204662 0.962827 0.853205 0.9706108 0.6256410 0.9497683 0.9696006 0.9461538 0.9249040 0.8958042 0.9651934 0.9893491 0.9668016 0.6309643 0.846154 0.9432420 0.9652747 0.8955778 0.834615 0.9429182 0.9178281 0.929586 0.963314 0.973904 0.8919872 0.8512821 0.949451 0.9699542 0.9743295 0.9382607 0.9440396 0.9638462 1.00000000 1.0000000 0.8931474 0.9450613 0.977052 0.957229 0.9521740 0.963700 0.9640898 1 0.9325422 0.948595 -0.01617520 6 0.931832 0.948329 -0.0164974 0.9869147 0.15845060 insignificant 1 1.00000 insignificant 0.921639 0.06994366 insignificant 1 1.00000 insignificant -0.03557890 0.2554364 insignificant 1.00000 insignificant 0.9325422 0.966014 -0.0326205 6 0.931832 0.966424 -0.03459240 9.9655e-01 2.4304e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9817e-01 3.8750e-03 weaklyHypometh 1.0000e+00 0.4035538 insignificant -0.06806055 4.4973e-02 weaklyHypometh 5.9175e-01 insignificant 0.9325422 0.9580420 -2.6818e-02 6 0.931832 0.961513 -2.9682e-02 9.9445e-01 9.9018e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6308e-01 1.0067e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0698306 2.1625e-02 weaklyHypometh 6.1787e-01 insignificant 0.948595 0.966014 -0.0177306 6 0.948329 0.966424 -0.0180950 9.5228e-01 1.3534e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9134e-01 9.7257e-02 insignificant 1.0000e+00 1.000000 insignificant -0.0324817 1.4707e-01 insignificant 1.0000e+00 insignificant 0.9485953 0.9580420 -0.0130143 6 0.948329 0.961513 -0.01318427 9.1483e-01 3.4039e-01 insignificant 1.0000e+00 1.00000000 insignificant 4.1807e-01 3.5218e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0342518 0.02606750 weaklyHypometh 0.66840 insignificant 0.9660144 0.9580420 0.0048861 6 0.966424 0.961513 0.0049107 2.0627e-01 8.7457e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.1176855 9.8806e-01 insignificant 1.0000 1.0000e+00 insignificant -0.0017701 9.1989e-01 insignificant 1.0000e+00 insignificant chr8 20968950 20969950 29364 ENSG00000210343 0.803996 121 7 0.7524394 165 7 0.7631558 136 7 0.777701 75 6 0.79349 134 7 0.821235 238 7 0.7989138 189 7 0.694280 102 7 0.7693517 114 7 0.810707 121 7 0.8024259 216 7 0.7648685 119 7 0.816919 132 7 NA 0 0 0.802921 129 7 0.7867347 90 6 0.735707 136 7 0.747887 71 6 0.780715 169 7 0.791459 199 7 0.722449 85 6 0.775000 28 3 0.7915344 111 7 0.845238 66 7 0.700000 14 1 0.856919 163 7 0.758340 87 7 0.768991 65 7 0.77743 118 7 0.8348519 265 7 0.7944510 184 7 0.801916 245 7 0.605717 155 7 0.7057656 101 7 0.5660102 225 7 0.5287712 47 4 0.8038069 81 7 0.748837 203 7 0.882109 103 6 0.781940 112 7 0.828869 72 5 0.685714 89 5 0.846673 84 4 0.7455949 0.721841 0.7606099 0.758276 0.750383 0.8024007 0.7454638 0.6211692 0.7176491 0.7658241 0.7741593 0.7341962 0.7898228 NA 0.7602927 0.7411514 0.702912 0.7065287 0.7426583 0.7457469 0.680225 0.7870763 0.7387138 0.813847 0.852725 0.822523 0.7293390 0.7607202 0.712831 0.8039045 0.7723587 0.7713902 0.5603434 0.7235920 0.53727037 0.6851999 0.7878068 0.7226169 0.844750 0.724124 0.7702633 0.758541 0.7941926 4 0.8045934 0.806429 -0.02183002 7 0.783667 0.804025 -0.0203576 0.9565009 0.18187786 insignificant 1 1.00000 insignificant 0.912196 0.05965566 insignificant 1 1.00000 insignificant -0.00586135 0.7064255 insignificant 1.00000 insignificant 0.8045934 0.663793 0.1397153 7 0.783667 0.649433 0.13423397 1.8601e-09 9.9457e-01 weaklyHypermeth 3.5097e-08 1.0000e+00 weaklyHypermeth 2.3382e-03 9.7211e-01 weaklyHypermeth 3.7713e-02 1.0000000 weaklyHypermeth 0.11991432 4.2935e-02 weaklyHypermeth 5.7247e-01 insignificant 0.8045934 0.8173913 -3.7079e-02 6 0.783667 0.824763 -4.1096e-02 9.9817e-01 4.3185e-02 weaklyHypometh 1.0000e+00 9.5966e-01 insignificant 9.9960e-01 8.8178e-03 weaklyHypometh 1.0000e+00 6.2984e-01 insignificant -0.0253288 5.0251e-01 insignificant 1.0000e+00 insignificant 0.806429 0.663793 0.1524767 7 0.804025 0.649433 0.1545916 7.3966e-08 9.9990e-01 weaklyHypermeth 1.5095e-06 1.0000e+00 weaklyHypermeth 2.0898e-03 9.9450e-01 weaklyHypermeth 3.4830e-02 1.000000 weaklyHypermeth 0.1257757 3.5994e-02 weaklyHypermeth 4.6746e-01 insignificant 0.8064291 0.8173913 -0.0136394 6 0.804025 0.824763 -0.02073865 9.4146e-01 3.1029e-01 insignificant 1.0000e+00 1.00000000 insignificant 9.3262e-01 6.1789e-02 insignificant 1.0000e+00 1.000000 insignificant -0.0194675 0.61532929 insignificant 1.00000 insignificant 0.6637931 0.8173913 -0.1548680 6 0.649433 0.824763 -0.1753302 9.9991e-01 1.4963e-04 weaklyHypometh 1.0000000 2.8231e-03 weaklyHypometh 0.9999249 1.4645e-03 weaklyHypometh 1.0000 3.6084e-02 weaklyHypometh -0.1452431 2.9675e-02 weaklyHypometh 4.0651e-01 insignificant chr8 21857950 21858950 29378 XPO7 ENSG00000130227 0.837485 156 11 0.6556859 258 9 0.7213728 262 11 0.952851 66 6 0.65963 77 4 0.728424 164 11 0.8334937 251 9 0.776904 113 7 0.6376511 136 9 0.563235 60 5 0.8032118 241 11 0.5403620 222 8 0.815876 188 10 NA 0 0 0.789700 198 9 0.8195971 38 2 0.723541 191 9 0.855533 73 6 0.907247 152 10 0.750633 163 11 0.750984 82 8 0.641667 44 5 0.7270341 110 9 0.595996 51 6 0.643386 33 4 0.739713 202 10 0.748269 104 9 0.616162 77 7 0.66545 217 7 0.7546530 314 11 0.7762050 164 11 0.791273 189 10 0.781905 135 8 0.7448090 143 9 0.7963999 254 9 0.8733766 42 4 0.8651515 86 8 0.861433 120 8 0.880011 150 10 0.801636 214 11 0.802619 60 5 0.843978 116 10 0.963790 82 6 0.8123623 0.768715 0.8624223 0.935218 0.811147 0.7996104 0.7497602 0.7847259 0.7943863 0.8185717 0.8526970 0.6864114 0.8256918 NA 0.8235346 0.7290486 0.808661 0.8465462 0.8498679 0.7603941 0.808856 0.6406250 0.8866689 0.839962 0.806169 0.838403 0.6701418 0.8014971 0.713773 0.8898526 0.8435326 0.8618140 0.8200758 0.7168149 0.62185037 0.8681006 0.7922078 0.7111226 0.940275 0.865095 0.7889610 0.907828 0.9645079 0 0.7188435 0.684310 0.03041862 11 0.755418 0.727399 0.0280192 0.1007228 0.90976652 insignificant 1 1.00000 insignificant 0.051337 0.86363644 insignificant 1 1.00000 insignificant 0.05221147 0.1108410 insignificant 1.00000 insignificant 0.7188435 0.873077 -0.1677454 9 0.755418 0.810644 -0.05522658 3.4863e-03 7.9066e-10 weaklyHypometh 3.6698e-02 7.9066e-07 weaklyHypometh 2.9896e-01 7.5710e-06 weaklyHypometh 1.0000e+00 0.0028014 weaklyHypometh -0.06406836 6.9837e-02 insignificant 8.2454e-01 insignificant 0.7188435 0.8617363 -1.2551e-01 10 0.755418 0.837299 -8.1881e-02 9.6083e-01 5.9372e-07 weaklyHypometh 1.0000e+00 1.9791e-04 weaklyHypometh 8.7610e-01 1.1695e-04 weaklyHypometh 1.0000e+00 2.3389e-02 weaklyHypometh -0.1019628 2.5687e-02 weaklyHypometh 6.8549e-01 insignificant 0.684310 0.873077 -0.1988226 9 0.727399 0.810644 -0.0832457 4.5205e-02 1.0504e-11 weaklyHypometh 3.7359e-01 1.0504e-08 weaklyHypometh 3.9398e-01 1.5759e-05 weaklyHypometh 1.0000e+00 0.013737 weaklyHypometh -0.1162798 1.6832e-03 weaklyHypometh 4.1053e-02 weaklyHypometh 0.6843100 0.8617363 -0.1550398 10 0.727399 0.837299 -0.10990011 9.9918e-01 7.5213e-07 weaklyHypometh 1.0000e+00 0.00041615 weaklyHypometh 9.8470e-01 1.3043e-04 weaklyHypometh 1.0000e+00 0.065213 weaklyHypometh -0.1541743 0.00297638 weaklyHypometh 0.21423 insignificant 0.8730769 0.8617363 0.0027660 8 0.810644 0.837299 -0.0266544 1.2990e-02 3.0550e-03 weaklyHypermeth 0.8660209 4.0734e-02 weaklyHypermeth 0.1908101 1.5509e-01 insignificant 1.0000 1.0000e+00 insignificant -0.0378945 3.3918e-01 insignificant 1.0000e+00 insignificant chr8 22101550 22102550 29387 ENSG00000177725 0.665273 263 7 0.6361449 302 8 0.6187343 104 7 0.637969 301 9 0.71592 75 7 0.658099 360 9 0.5035196 126 7 0.755218 164 8 0.5949786 61 5 0.497937 57 5 0.7199824 340 8 1.0000000 19 3 0.774550 91 5 0.4166667 33 3 0.716802 89 4 0.8500000 20 2 0.616667 26 3 0.524363 284 9 0.672835 247 7 0.600418 279 8 0.543333 75 5 0.708036 72 7 0.6383772 174 7 0.432987 88 7 0.690200 182 9 0.675179 252 8 0.590211 97 5 0.497024 40 4 0.63479 179 7 0.5762664 275 10 0.6446278 266 8 0.635981 329 8 0.430945 224 8 0.3407143 156 8 0.3536706 168 7 0.5180999 157 7 0.4542694 196 7 0.502504 325 8 0.646259 292 7 0.644268 211 7 0.703387 238 7 0.674153 242 7 0.692759 226 7 0.9016167 0.804694 0.7482652 0.866536 0.890933 0.9231348 0.7968270 0.8676505 0.8841139 0.8609977 0.8787444 0.9626690 0.9163278 0.8669725 0.8117516 0.7953221 0.731463 0.8527308 0.8883280 0.8624098 0.884467 0.7917791 0.8256262 0.885790 0.927509 0.885623 0.8267598 0.8212622 0.841942 0.9037956 0.8451997 0.8876905 0.4491437 0.4162032 0.49786740 0.6999792 0.4846244 0.7291017 0.887556 0.910662 0.8940331 0.871123 0.9454744 4 0.6072200 0.640710 -0.00318688 7 0.557590 0.641322 -0.0837323 0.7899044 0.74004478 insignificant 1 1.00000 insignificant 0.584765 0.82358553 insignificant 1 1.00000 insignificant 0.05321956 0.1668646 insignificant 1.00000 insignificant 0.6074074 0.346656 0.2240244 7 0.613349 0.440224 0.17312480 1.7354e-22 6.3854e-01 hypermethylated 1.0208e-20 1.0000e+00 hypermethylated 2.8124e-09 5.7156e-01 hypermethylated 2.1634e-07 1.0000000 hypermethylated 0.22543664 7.4506e-05 hypermethylated 4.0373e-03 hypermethylated 0.6074074 0.5210918 -1.8361e-02 7 0.613349 0.661489 -4.8140e-02 9.8359e-01 3.5562e-02 weaklyHypometh 1.0000e+00 8.8495e-01 insignificant 9.9975e-01 2.1771e-02 weaklyHypometh 1.0000e+00 8.3733e-01 insignificant -0.0133612 6.7618e-01 insignificant 1.0000e+00 insignificant 0.640533 0.346656 0.2492733 8 0.605454 0.440224 0.1652303 1.3214e-15 7.7728e-01 hypermethylated 6.0064e-14 1.0000e+00 hypermethylated 3.3850e-07 8.9072e-01 hypermethylated 1.9333e-05 1.000000 hypermethylated 0.1722171 8.8988e-04 weaklyHypermeth 2.4051e-02 weaklyHypermeth 0.6405325 0.5210918 -0.0179403 7 0.605454 0.661489 -0.05603496 8.6376e-01 3.7748e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant 9.9115e-01 1.3363e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.0665808 0.02388601 weaklyHypometh 0.64557 insignificant 0.3466558 0.5210918 -0.2493165 7 0.440224 0.661489 -0.2212653 9.9790e-01 3.8090e-12 hypomethylated 1.0000000 2.3806e-10 hypomethylated 0.9890756 2.8168e-07 hypomethylated 1.0000 4.0240e-05 hypomethylated -0.2387978 2.2378e-04 hypomethylated 1.4918e-02 hypomethylated chr8 22101850 22102850 29388 ENSG00000177725 0.631350 229 6 0.6210320 240 7 0.6118869 92 6 0.608584 260 8 0.68934 61 6 0.621675 289 8 0.4753002 112 6 0.728907 131 7 0.5756173 48 4 0.458025 50 4 0.6963064 270 7 1.0000000 14 2 0.742530 61 4 0.3000000 17 2 0.693152 72 3 0.8000000 9 1 0.616667 26 3 0.477103 243 8 0.643117 180 6 0.557823 228 7 0.492593 62 4 0.702041 60 6 0.6204191 149 6 0.377648 59 6 0.655778 174 8 0.641866 212 7 0.562222 78 4 0.441138 33 3 0.60679 126 6 0.5385746 204 9 0.6229992 210 7 0.604642 268 7 0.387919 158 7 0.2674603 148 7 0.2613379 166 7 0.5180999 157 7 0.4251418 129 6 0.447227 279 7 0.616214 256 6 0.608135 181 6 0.666116 210 6 0.642577 218 6 0.662325 196 6 0.8800631 0.824306 0.7737648 0.855316 0.879171 0.9035158 0.8002997 0.8452307 0.9200149 0.8622024 0.8765663 0.9510031 0.9005969 0.8254014 0.7896887 0.7313602 0.679351 0.8371970 0.8720872 0.8377952 0.848363 0.8048351 0.8336343 0.871651 0.904855 0.857692 0.8219643 0.7654067 0.827927 0.9001401 0.8470478 0.8782085 0.3338193 0.2337667 0.34095096 0.6353102 0.4121890 0.6444460 0.878459 0.903578 0.8720792 0.843869 0.9388518 3 0.5383739 0.578593 -0.00549479 6 0.522872 0.615606 -0.0927340 0.7913833 0.69449987 insignificant 1 1.00000 insignificant 0.536712 0.81375658 insignificant 1 1.00000 insignificant 0.05519492 0.2015688 insignificant 1.00000 insignificant 0.5385785 0.257473 0.2605459 6 0.580969 0.396251 0.18471833 1.9685e-22 5.1908e-01 hypermethylated 1.0936e-20 1.0000e+00 hypermethylated 7.4718e-10 6.3071e-01 hypermethylated 8.3020e-08 1.0000000 hypermethylated 0.24288980 6.5517e-04 hypermethylated 1.9854e-02 hypermethylated 0.5385785 0.4618285 -1.3081e-02 6 0.580969 0.629883 -4.8913e-02 9.6786e-01 4.8902e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9947e-01 2.3619e-02 weaklyHypometh 1.0000e+00 8.7478e-01 insignificant -0.0116525 7.3742e-01 insignificant 1.0000e+00 insignificant 0.578335 0.257473 0.2937043 7 0.572896 0.396251 0.1766450 1.5570e-15 6.7633e-01 hypermethylated 6.7698e-14 1.0000e+00 hypermethylated 1.1754e-07 9.0633e-01 hypermethylated 9.0625e-06 1.000000 hypermethylated 0.1876949 4.1327e-03 weaklyHypermeth 8.4341e-02 weaklyHypermeth 0.5783354 0.4618285 -0.0111145 6 0.572896 0.629883 -0.05698676 7.8045e-01 8.0551e-02 insignificant 1.0000e+00 1.00000000 insignificant 9.8281e-01 1.4783e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.0668474 0.04103475 weaklyHypometh 0.87308 insignificant 0.2574735 0.4618285 -0.2759335 6 0.396251 0.629883 -0.2336317 9.9393e-01 8.6889e-12 hypomethylated 1.0000000 4.8272e-10 hypomethylated 0.9953385 8.9951e-08 hypomethylated 1.0000 1.4992e-05 hypomethylated -0.2545423 1.2385e-03 weaklyHypometh 4.9540e-02 weaklyHypometh chr8 22141850 22142850 29395 ENSG00000177725 0.790388 176 7 0.6385111 271 8 0.8555097 165 7 0.902789 166 5 0.70613 123 7 0.769822 229 8 0.6818202 94 5 0.738715 195 7 0.7438861 127 6 0.731509 103 5 0.8829143 318 9 0.7136243 60 5 0.626826 158 8 0.7754386 54 4 0.717381 107 5 0.8121212 27 2 0.771795 50 3 0.757782 247 5 0.856092 228 8 0.720893 194 8 0.758649 117 7 0.619017 126 5 0.8610589 184 7 0.874395 111 8 0.833854 88 5 0.802055 400 9 0.767424 223 9 0.693755 71 5 0.84186 200 8 0.6347917 398 9 0.7198775 399 9 0.910657 294 7 0.502074 189 7 0.5378110 157 7 0.7464120 199 5 0.6106061 41 3 0.5194216 161 9 0.553118 312 9 0.786653 242 6 0.816038 237 7 0.678215 161 5 0.713764 165 3 0.602040 244 5 0.7693433 0.594574 0.8184421 0.771023 0.765979 0.8499100 0.7484366 0.6390206 0.6903009 0.7897684 0.7696930 0.6881463 0.5206695 0.8315495 0.6186749 0.8162550 0.679363 0.7431974 0.6938753 0.6417476 0.832327 0.5296080 0.7695162 0.773758 0.802751 0.769127 0.5955922 0.8142861 0.708656 0.6019788 0.6975189 0.8458306 0.2655882 0.3468851 0.38453443 0.3571410 0.4525104 0.1964999 0.685677 0.759569 0.6492081 0.702319 0.6878938 5 0.7599482 0.793870 -0.00810288 7 0.816198 0.801348 0.0148499 0.8176442 0.78056965 insignificant 1 1.00000 insignificant 0.885355 0.81963371 insignificant 1 1.00000 insignificant -0.01675243 0.6067328 insignificant 1.00000 insignificant 0.7599482 0.524079 0.3218656 7 0.816198 0.511452 0.30474640 2.2299e-22 9.9195e-01 hypermethylated 1.1736e-20 1.0000e+00 hypermethylated 9.9564e-06 9.7596e-01 hypermethylated 2.6909e-04 1.0000000 hypermethylated 0.18145681 2.6893e-03 weaklyHypermeth 6.1121e-02 weaklyHypermeth 0.7579156 0.6873213 2.5154e-02 5 0.776417 0.735639 4.0778e-02 4.1537e-01 4.0470e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.6744e-01 2.5489e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0403553 3.7410e-01 insignificant 1.0000e+00 insignificant 0.793870 0.524079 0.2793937 7 0.801348 0.511452 0.2898965 3.9545e-13 9.6284e-01 hypermethylated 1.2358e-11 1.0000e+00 hypermethylated 4.2004e-05 9.9321e-01 hypermethylated 1.0770e-03 1.000000 hypermethylated 0.1982092 1.3455e-03 weaklyHypermeth 3.3638e-02 weaklyHypermeth 0.7930901 0.6873213 0.0301047 5 0.785281 0.735639 0.04964196 1.6110e-01 2.0213e-01 insignificant 1.0000e+00 1.00000000 insignificant 5.3190e-01 2.5531e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0571077 0.25811128 insignificant 1.00000 insignificant 0.5231214 0.6873213 -0.3558913 5 0.542183 0.735639 -0.1934564 9.9867e-01 8.8934e-09 hypomethylated 1.0000000 3.4205e-07 hypomethylated 0.9994274 5.6688e-04 hypomethylated 1.0000 1.7715e-02 hypomethylated -0.1411016 2.6863e-02 weaklyHypometh 3.8933e-01 insignificant chr8 22301750 22302750 29403 SLC39A14 ENSG00000104635 0.938933 128 6 0.9036169 114 6 0.8891534 50 6 0.931912 183 6 0.85556 25 4 0.970779 179 6 0.8703704 41 4 0.966989 110 6 0.8878788 53 6 0.968182 55 6 0.9597953 175 6 0.9166667 12 0 0.968186 125 6 NA 0 0 0.972222 33 5 0.5500000 22 4 0.791667 18 0 0.896907 273 6 0.957516 70 4 0.955347 115 6 0.910648 53 6 0.950758 97 6 0.9583333 36 4 0.944444 34 5 0.846732 70 4 0.973232 142 6 0.894571 55 6 0.833333 4 0 0.97238 118 4 0.9300807 237 6 0.9838462 217 6 0.881058 215 6 0.866270 65 4 0.9358974 106 4 1.0000000 15 3 1.0000000 5 0 0.8416667 29 3 0.981762 234 6 0.918233 100 4 0.966327 199 4 0.958852 120 4 0.884921 62 4 0.931848 176 6 0.9108502 0.903883 0.8882801 0.937643 0.945205 0.9714584 0.9147641 0.9579115 0.9327522 0.9476961 0.9650324 0.9178082 0.9514108 NA 0.9726027 0.5831050 0.958904 0.8750079 0.9648133 0.9424423 0.916438 0.9341220 0.9315068 0.952055 0.896320 0.990037 0.9168742 0.9560667 0.968982 0.9568552 0.9794942 0.8691538 0.8048271 0.8935722 0.98510585 1.0000000 0.8767123 0.9737512 0.904446 0.955046 0.9655122 0.923679 0.9482590 0 0.9241999 0.937402 -0.01266659 6 0.929904 0.932053 -0.0021489 0.6969806 0.39872322 insignificant 1 1.00000 insignificant 0.441926 0.56829189 insignificant 1 1.00000 insignificant -0.02056497 0.4495605 lowCoverage 1.00000 lowCoverage 0.9241999 0.927313 -0.0043834 4 0.929904 0.929653 0.00025080 5.5229e-01 6.3994e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.6569e-01 4.2403e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage -0.03487951 3.5416e-01 lowCoverage 1.0000e+00 lowCoverage 0.9241999 0.9330289 -1.0468e-02 4 0.929904 0.931431 -1.5276e-03 7.4135e-01 3.0311e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 6.2807e-01 7.5161e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0293163 2.8877e-01 lowCoverage 1.0000e+00 lowCoverage 0.937402 0.927313 0.0114701 4 0.932053 0.929653 0.0023997 5.6424e-01 7.6846e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.3297e-01 4.8401e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage -0.0143145 6.6499e-01 lowCoverage 1.0000e+00 lowCoverage 0.9374022 0.9330289 0.0060013 4 0.932053 0.931431 0.00062131 5.2326e-01 4.3336e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 5.2120e-01 6.0545e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage -0.0087513 0.67918737 lowCoverage 1.00000 lowCoverage 0.9273128 0.9330289 -0.0065065 4 0.929653 0.931431 -0.0017784 6.4275e-01 4.8423e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage 0.4866505 9.4910e-01 lowCoverage 1.0000 1.0000e+00 lowCoverage 0.0055632 8.6616e-01 lowCoverage 1.0000e+00 lowCoverage chr8 22305350 22306350 29404 SLC39A14 ENSG00000104635 0.818097 542 12 0.7930861 427 12 0.7072751 345 12 0.900093 531 12 0.88637 210 11 0.908378 942 12 0.8675004 168 12 0.761597 389 12 0.7036214 297 12 0.836089 268 12 0.8693259 589 12 0.8155754 79 8 0.776385 368 12 0.8693103 179 9 0.835028 334 12 0.6906593 57 5 0.544048 34 3 0.650409 566 10 0.791250 294 10 0.893526 558 12 0.720020 126 10 0.428471 274 11 0.9270165 341 12 0.899621 170 10 0.874787 140 10 0.876226 481 12 0.822190 313 11 0.799010 163 10 0.75018 291 11 0.9054196 535 12 0.7943462 415 12 0.898717 640 12 0.025143 456 12 0.0079365 201 11 0.0316618 348 8 0.0891204 106 9 0.0666849 470 10 0.070291 549 12 0.609925 343 10 0.725644 450 11 0.555381 482 10 0.516036 426 12 0.622120 516 11 0.8231911 0.757868 0.7095993 0.895038 0.854897 0.9033181 0.8715554 0.8203256 0.8468548 0.9034347 0.8912319 0.7877728 0.7852855 0.8679016 0.8303861 0.7683026 0.691381 0.6062541 0.8146193 0.9129060 0.844253 0.4649827 0.9130311 0.901714 0.889253 0.875473 0.8944271 0.8924603 0.758945 0.9228187 0.8348016 0.9030036 0.0423309 0.0130952 0.03612986 0.1272569 0.0470917 0.1286928 0.601249 0.715683 0.5785962 0.517638 0.6086799 8 0.8201589 0.841143 -0.02404711 12 0.765056 0.759535 0.0055211 0.9923937 0.23174917 insignificant 1 1.00000 insignificant 0.999010 0.09431261 insignificant 1 1.00000 insignificant -0.01211941 0.7902060 insignificant 1.00000 insignificant 0.8202983 0.046053 0.7705980 12 0.800770 0.060381 0.74038932 7.6902e-128 1.0000e+00 hypermethylated 7.6902e-125 1.0000e+00 hypermethylated 5.4707e-29 1.0000e+00 hypermethylated 5.4707e-26 1.0000000 hypermethylated 0.74740818 2.9571e-20 hypermethylated 2.9571e-17 hypermethylated 0.8206560 0.5913396 2.3344e-01 10 0.823121 0.602077 2.2104e-01 7.1167e-24 1.0000e+00 hypermethylated 7.1167e-21 1.0000e+00 hypermethylated 2.4106e-14 1.0000e+00 hypermethylated 2.4106e-11 1.0000e+00 hypermethylated 0.1900598 2.3299e-03 weaklyHypermeth 1.3735e-01 insignificant 0.840535 0.046031 0.7911717 12 0.775566 0.056355 0.7192104 2.6332e-89 1.0000e+00 hypermethylated 2.6332e-86 1.0000e+00 hypermethylated 4.4226e-25 1.0000e+00 hypermethylated 4.4226e-22 1.000000 hypermethylated 0.7595276 9.7762e-11 hypermethylated 4.8881e-08 hypermethylated 0.8424180 0.5913396 0.2570757 10 0.844457 0.602077 0.24238000 2.3484e-18 1.0000e+00 hypermethylated 2.3484e-15 1.00000000 hypermethylated 1.4206e-12 1.0000e+00 hypermethylated 1.4206e-09 1.000000 hypermethylated 0.2021792 0.00221185 weaklyHypermeth 0.20108 insignificant 0.0456901 0.5913396 -0.5312341 10 0.049611 0.602077 -0.5524663 1.0000e+00 2.2543e-53 hypomethylated 1.0000000 2.2543e-50 hypomethylated 1.0000000 2.6293e-17 hypomethylated 1.0000 2.6293e-14 hypomethylated -0.5573484 2.4306e-05 hypomethylated 2.7147e-03 hypomethylated chr8 22475050 22476050 29409 SORBS3 ENSG00000120896 0.256361 547 13 0.3148163 475 13 0.2469679 282 13 0.265842 483 13 0.19696 236 14 0.256153 612 13 0.1984316 360 15 0.205626 324 13 0.1712098 373 13 0.218144 453 15 0.3040841 471 14 0.1968254 271 12 0.146436 302 13 0.2592212 186 10 0.168390 368 12 0.2994048 86 6 0.081352 77 7 0.256874 914 11 0.206057 414 13 0.315747 477 14 0.226550 136 9 0.123746 269 9 0.3082561 316 13 0.214779 238 14 0.242120 421 14 0.149271 644 13 0.178680 267 13 0.189717 237 12 0.27778 292 14 0.2685466 614 13 0.2903686 563 15 0.284677 552 13 0.028065 448 14 0.0171585 316 13 0.1737837 455 6 0.0050505 104 7 0.0736640 340 13 0.207526 539 13 0.202995 545 13 0.257309 491 13 0.203232 580 13 0.177014 579 10 0.272380 502 14 0.3250257 0.272667 0.2080247 0.290552 0.259741 0.3208844 0.2480616 0.2672909 0.2583318 0.3037240 0.3076919 0.2991308 0.2178622 0.2859236 0.2239504 0.3616300 0.300688 0.1888336 0.2247654 0.3083813 0.305577 0.2195100 0.3319337 0.295460 0.201723 0.234203 0.2392495 0.2982753 0.294881 0.2540046 0.3017329 0.3091874 0.0295442 0.0192773 0.13310658 0.0495762 0.1016359 0.0359404 0.304818 0.256703 0.2319906 0.239564 0.2772673 9 0.3161173 0.336562 -0.00776990 13 0.196067 0.219045 -0.0229783 0.9069648 0.20816597 insignificant 1 1.00000 insignificant 0.947182 0.25497912 insignificant 1 1.00000 insignificant -0.00129579 0.9533276 insignificant 1.00000 insignificant 0.3162127 0.106364 0.3050019 13 0.215114 0.076129 0.13898525 5.8264e-17 9.9957e-01 hypermethylated 2.0091e-15 1.0000e+00 hypermethylated 1.0506e-09 9.9842e-01 hypermethylated 1.0238e-07 1.0000000 hypermethylated 0.14403730 7.4580e-03 weaklyHypermeth 1.4342e-01 insignificant 0.3161173 0.3852429 4.7844e-03 13 0.196067 0.210088 -1.4021e-02 5.6402e-01 6.8383e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.4494e-01 9.4550e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0056591 8.0776e-01 insignificant 1.0000e+00 insignificant 0.336933 0.106315 0.3101302 13 0.209089 0.072669 0.1364198 1.8131e-15 1.0000e+00 hypermethylated 7.5548e-14 1.0000e+00 hypermethylated 9.0088e-07 1.0000e+00 hypermethylated 3.9169e-05 1.000000 hypermethylated 0.1453331 6.7582e-03 weaklyHypermeth 1.2751e-01 insignificant 0.3365617 0.3852429 0.0143285 13 0.219045 0.210088 0.00895740 2.9286e-01 9.4783e-01 insignificant 1.0000e+00 1.00000000 insignificant 4.3608e-01 9.8903e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0069549 0.78531883 insignificant 1.00000 insignificant 0.1064120 0.3853858 -0.3168865 13 0.079936 0.220592 -0.1406565 1.0000e+00 2.0394e-08 hypomethylated 1.0000000 7.5532e-07 hypomethylated 0.9999883 6.2231e-03 weaklyHypometh 1.0000 1.1113e-01 insignificant -0.1383782 9.3349e-03 weaklyHypometh 1.9051e-01 insignificant chr8 22509950 22510950 29410 PDLIM2 ENSG00000120913 0.821678 128 5 0.7326985 158 5 0.8760000 121 5 0.899725 108 5 0.77857 140 5 0.835460 250 5 0.8075630 171 5 0.912500 158 5 0.8349451 72 5 0.900228 87 5 0.8689145 279 5 0.8923077 65 5 0.952778 40 5 0.9142857 105 5 0.855336 111 5 0.8279570 163 5 NA 0 0 0.885721 180 5 0.877791 203 5 0.907135 198 5 0.785000 124 5 0.900000 10 0 0.9090323 152 5 0.846429 77 5 1.000000 9 0 0.871746 179 5 0.845938 78 5 0.847603 92 5 0.90220 227 5 0.8985755 125 5 0.8823065 229 5 0.815119 307 5 0.861571 159 5 0.8147971 276 5 0.8918478 463 5 NA 0 0 0.9528507 79 5 0.967213 305 5 0.877778 138 5 0.853178 197 5 0.715033 88 5 0.828406 168 5 0.817097 157 5 0.8212665 0.729457 0.8745185 0.896707 0.777302 0.8362272 0.8050980 0.9086111 0.8317542 0.8965953 0.8670099 0.8923077 0.9508025 0.9142857 0.8545279 0.8247247 NA 0.8847931 0.8771499 0.9061757 0.938296 0.8911111 0.9085161 0.840079 1.000000 0.871252 0.8451715 0.8504071 0.902684 0.8974232 0.8562564 0.8135810 0.8590855 0.8054517 0.89692029 NA 0.9524404 0.9666302 0.873380 0.851913 0.7071314 0.827479 0.8127634 5 0.8553160 0.870566 -0.01520265 5 0.856732 0.871873 -0.0151416 0.8396014 0.12082849 insignificant 1 1.00000 insignificant 0.990733 0.05606726 insignificant 1 1.00000 insignificant -0.01313984 0.5171791 lowCoverage 1.00000 lowCoverage 0.8553160 0.891576 -0.0362439 5 0.856732 0.892884 -0.03615198 9.3684e-01 7.3012e-03 weaklyHypometh 1.0000e+00 6.0843e-01 insignificant 9.9848e-01 3.0995e-03 weaklyHypometh 1.0000e+00 0.4035538 insignificant -0.03546667 2.9771e-01 lowCoverage 1.0000e+00 lowCoverage 0.8553160 0.8275401 2.9466e-02 5 0.856732 0.828730 2.8002e-02 1.0773e-01 9.0945e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.8843e-02 9.6589e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.0438910 2.0230e-01 lowCoverage 1.0000e+00 lowCoverage 0.870566 0.891576 -0.0208420 5 0.871873 0.892884 -0.0210104 9.0573e-01 5.4615e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 8.7201e-01 1.4670e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0223268 5.1483e-01 lowCoverage 1.0000e+00 lowCoverage 0.8705663 0.8275401 0.0446133 5 0.871873 0.828730 0.04314323 2.7432e-02 9.6804e-01 weaklyHypermeth 7.6448e-01 1.00000000 insignificant 1.0677e-02 9.9607e-01 weaklyHypermeth 4.2951e-01 1.000000 insignificant 0.0570309 0.11980480 lowCoverage 1.00000 lowCoverage 0.8915757 0.8275401 0.0646983 5 0.892884 0.828730 0.0641536 8.3315e-03 9.8781e-01 weaklyHypermeth 0.5951090 1.0000e+00 insignificant 0.0041094 9.9992e-01 weaklyHypermeth 0.6849 1.0000e+00 insignificant 0.0793577 8.1002e-02 lowCoverage 8.3507e-01 lowCoverage chr8 22572050 22573050 29412 BIN3 ENSG00000147439 0.460923 211 5 0.2774051 116 5 0.5589290 126 5 0.477595 232 5 0.47816 90 5 0.390298 311 5 0.7123596 140 5 0.484505 96 5 0.4286769 236 5 0.555542 183 5 0.5586670 148 5 0.4393939 78 5 0.140596 218 5 0.4109476 87 5 0.360527 207 5 0.5787879 103 5 0.331389 95 5 0.270655 306 5 0.257751 77 5 0.398756 252 5 0.731111 55 5 0.084876 201 5 0.4488130 134 5 0.396358 79 5 0.440570 111 5 0.154657 194 5 0.346689 142 5 0.409568 105 5 0.31581 134 5 0.1669419 193 5 0.3039115 157 5 0.758851 237 5 0.175192 182 5 0.0159754 116 5 0.0000000 99 3 0.0820513 47 3 0.2061128 186 5 0.170085 167 5 0.155791 314 5 0.183294 291 5 0.190585 213 3 0.130476 252 5 0.204954 243 5 0.4556033 0.282253 0.5800505 0.483396 0.372817 0.5620195 0.7338893 0.4634955 0.3358307 0.6033215 0.5832141 0.4350461 0.1395006 0.3977739 0.3906680 0.5011419 0.338654 0.2746252 0.3264192 0.2943432 0.872039 0.1159866 0.5452013 0.542514 0.412533 0.206882 0.3545376 0.5085321 0.334308 0.2141265 0.3114831 0.7581619 0.0125920 0.0162381 0.00099839 0.0743961 0.0229035 0.1456831 0.216217 0.205353 0.2383079 0.138056 0.2364386 5 0.4111782 0.392652 0.02325678 5 0.414368 0.254025 0.1603427 0.4996827 0.97014939 insignificant 1 1.00000 insignificant 0.546331 0.97630716 insignificant 1 1.00000 insignificant 0.04874701 0.4754885 insignificant 1.00000 insignificant 0.4113025 0.047679 0.3759615 5 0.473563 0.195109 0.27845416 2.8670e-17 9.9962e-01 hypermethylated 1.0618e-15 1.0000e+00 hypermethylated 1.2879e-11 9.9975e-01 hypermethylated 2.5758e-09 1.0000000 hypermethylated 0.32035718 1.3232e-05 lowCoverage 8.2699e-04 lowCoverage 0.4111245 0.2162986 1.9921e-01 5 0.385824 0.154474 2.3135e-01 4.9073e-08 9.9999e-01 weaklyHypermeth 6.1341e-06 1.0000e+00 weaklyHypermeth 2.5423e-08 1.0000e+00 weaklyHypermeth 5.0845e-06 1.0000e+00 weaklyHypermeth 0.2555733 6.3874e-08 lowCoverage 6.3874e-05 lowCoverage 0.393103 0.047679 0.3555514 5 0.290314 0.195109 0.0952054 8.9221e-08 9.1751e-01 hypermethylated 1.7844e-06 1.0000e+00 hypermethylated 7.3366e-09 9.5981e-01 hypermethylated 9.1707e-07 1.000000 hypermethylated 0.2716102 1.3047e-03 lowCoverage 3.3638e-02 lowCoverage 0.3935558 0.2162986 0.1829750 5 0.338700 0.154474 0.18422609 8.1184e-04 9.9976e-01 weaklyHypermeth 4.0592e-02 1.00000000 weaklyHypermeth 3.2793e-05 9.9999e-01 weaklyHypermeth 4.0870e-03 1.000000 weaklyHypermeth 0.2068263 0.00543713 lowCoverage 0.26881 lowCoverage 0.0429293 0.2162986 -0.1683098 5 0.094294 0.154474 -0.0601802 9.9911e-01 4.6727e-09 weaklyHypometh 1.0000000 1.9470e-07 weaklyHypometh 0.9901125 1.6532e-04 weaklyHypometh 1.0000 7.8723e-03 weaklyHypometh -0.0647839 1.3962e-01 lowCoverage 1.0000e+00 lowCoverage chr8 22681450 22682450 29416 EGR3 ENSG00000179388 0.859756 297 9 0.7713564 99 5 0.5923586 133 5 0.761246 339 7 0.95767 62 5 0.620818 276 9 0.8428442 89 5 0.675886 126 7 0.8796590 101 5 0.900936 111 5 0.7790733 159 5 0.8428571 70 5 0.769643 88 5 NA 0 0 0.739552 119 5 0.9722222 50 5 0.675137 70 5 0.848974 373 9 0.685307 63 2 0.693338 263 7 0.772258 64 5 0.661676 104 6 0.6634928 183 6 0.826087 90 5 0.736996 73 5 0.763187 173 7 0.677567 102 5 0.747835 69 6 0.76997 130 5 0.8187166 178 5 0.7376493 155 7 0.818100 348 7 0.503988 121 7 0.4300036 107 5 0.4250000 13 2 0.4504723 94 7 0.3491744 86 5 0.650067 211 7 0.675486 296 9 0.707940 228 9 0.741473 258 7 0.675568 220 7 0.719482 339 9 0.9140185 0.879522 0.8493500 0.883753 0.952257 0.8655913 0.8709522 0.9199714 0.8790445 0.9405240 0.8984887 0.8479353 0.9282366 NA 0.8874389 0.9641927 0.890990 0.9071615 0.7690515 0.8849604 0.887489 0.7588468 0.9372925 0.918648 0.823458 0.919607 0.8927164 0.9163411 0.888854 0.9361910 0.9368076 0.9409390 0.3338111 0.5620380 NA 0.5859882 0.2816485 0.8001229 0.837048 0.883112 0.8680104 0.815041 0.8699554 5 0.8597645 0.876425 -0.01435602 5 0.742270 0.739930 0.0023396 0.8762947 0.63985685 insignificant 1 1.00000 insignificant 0.825246 0.72858429 insignificant 1 1.00000 insignificant 0.03309851 0.2801073 insignificant 1.00000 insignificant 0.8597709 0.566456 0.2802271 5 0.705615 0.477624 0.22799088 2.8612e-14 9.9998e-01 hypermethylated 7.9478e-13 1.0000e+00 hypermethylated 4.0135e-06 1.0000e+00 hypermethylated 1.2162e-04 1.0000000 hypermethylated 0.31444227 1.2089e-04 hypermethylated 5.2559e-03 hypermethylated 0.8598196 0.8247576 3.2047e-02 5 0.719504 0.702143 1.7361e-02 6.0378e-03 7.7734e-01 weaklyHypermeth 2.0820e-01 1.0000e+00 insignificant 1.2019e-02 9.0994e-01 weaklyHypermeth 4.7724e-01 1.0000e+00 insignificant 0.0785701 1.0442e-02 weaklyHypermeth 3.7291e-01 insignificant 0.876729 0.566456 0.2973211 5 0.716579 0.477624 0.2389552 3.7954e-09 9.9974e-01 hypermethylated 8.8265e-08 1.0000e+00 hypermethylated 8.7788e-06 9.9954e-01 hypermethylated 2.6603e-04 1.000000 hypermethylated 0.2813438 5.1043e-04 hypermethylated 1.5013e-02 hypermethylated 0.8762019 0.8247576 0.0446005 5 0.674913 0.702143 -0.02723056 5.5035e-02 8.8086e-01 insignificant 1.0000e+00 1.00000000 insignificant 7.8414e-02 8.5445e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0454716 0.04866575 weaklyHypermeth 0.97331 insignificant 0.5673534 0.8246269 -0.2451752 7 0.521045 0.675065 -0.1540208 9.9734e-01 4.9725e-04 hypomethylated 1.0000000 8.1516e-03 hypomethylated 0.9975770 2.5411e-03 weaklyHypometh 1.0000 5.3669e-02 weaklyHypometh -0.2358722 1.7230e-03 weaklyHypometh 5.7434e-02 weaklyHypometh chr8 22681750 22682750 29417 EGR3 ENSG00000179388 0.911924 281 7 0.8798990 91 5 0.7064781 129 5 0.795307 331 7 0.95767 62 5 0.605708 244 7 0.9015700 83 5 0.726140 114 5 0.8796590 101 5 0.951248 103 5 0.7470977 151 5 0.8428571 70 5 0.776190 85 5 NA 0 0 0.739552 119 5 0.9722222 50 5 0.733516 68 5 0.876061 353 7 0.689035 57 2 0.714476 218 5 0.707189 62 5 0.632235 95 5 0.6295247 177 6 0.934783 88 5 0.831795 67 5 0.703984 159 5 0.728301 97 5 0.747835 69 6 0.91853 123 5 0.7733957 173 5 0.7077759 141 5 0.835766 312 5 0.452203 94 5 0.4900049 99 5 0.2500000 3 0 0.4394661 88 7 0.3060814 83 5 0.683415 203 7 0.670583 286 7 0.713744 206 7 0.703323 250 7 0.678112 214 7 0.732685 327 7 0.9140185 0.879522 0.8493500 0.883753 0.952257 0.8655913 0.8709522 0.9199714 0.8790445 0.9405240 0.8984887 0.8479353 0.9282366 NA 0.8874389 0.9641927 0.890990 0.9071615 0.7690515 0.8849604 0.887489 0.7588468 0.9372925 0.918648 0.823458 0.919607 0.8927164 0.9163411 0.888854 0.9361910 0.9368076 0.9409390 0.3338111 0.5620380 NA 0.5859882 0.2816485 0.8001229 0.837048 0.883112 0.8680104 0.815041 0.8699554 5 0.8738007 0.885330 -0.00867657 5 0.757817 0.739876 0.0179411 0.7799487 0.85410526 insignificant 1 1.00000 insignificant 0.679481 0.92023061 insignificant 1 1.00000 insignificant 0.04828147 0.2122071 insignificant 1.00000 insignificant 0.8738439 0.566667 0.2988605 5 0.718495 0.461274 0.25722103 2.0206e-14 9.9993e-01 hypermethylated 5.9430e-13 1.0000e+00 hypermethylated 4.7853e-06 1.0000e+00 hypermethylated 1.4074e-04 1.0000000 hypermethylated 0.37401251 9.9476e-04 lowCoverage 2.9258e-02 lowCoverage 0.8738905 0.8300857 3.8307e-02 5 0.735162 0.701193 3.3969e-02 3.0132e-03 9.2982e-01 weaklyHypermeth 1.1589e-01 1.0000e+00 insignificant 4.3325e-03 9.7527e-01 weaklyHypermeth 1.8662e-01 1.0000e+00 insignificant 0.1111849 4.2324e-04 weaklyHypermeth 5.2905e-02 weaklyHypermeth 0.885678 0.566667 0.3086060 5 0.711838 0.461274 0.2505642 1.5536e-08 9.9773e-01 hypermethylated 3.3056e-07 1.0000e+00 hypermethylated 4.0222e-05 9.9647e-01 hypermethylated 1.0585e-03 1.000000 hypermethylated 0.3257310 1.8960e-03 lowCoverage 4.5142e-02 lowCoverage 0.8851091 0.8300857 0.0452516 5 0.661838 0.701193 -0.03935440 5.5179e-02 8.1288e-01 insignificant 1.0000e+00 1.00000000 insignificant 1.0587e-01 7.7273e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0629035 0.06240369 insignificant 1.00000 insignificant 0.5676626 0.8299532 -0.2561579 5 0.512527 0.667992 -0.1554651 9.8823e-01 9.4720e-04 hypomethylated 1.0000000 1.4572e-02 hypomethylated 0.9871982 4.8069e-03 weaklyHypometh 1.0000 9.3277e-02 weaklyHypometh -0.2628276 7.6752e-03 lowCoverage 1.6685e-01 lowCoverage chr8 22779350 22780350 29418 EGR3 ENSG00000179388 0.419782 205 6 0.3444159 168 6 0.4494058 122 6 0.334795 166 6 0.44063 71 6 0.404014 289 6 0.3180501 144 6 0.342200 148 6 0.3003470 161 6 0.396723 119 6 0.4761505 128 6 0.3490704 126 6 0.311324 181 6 0.8134675 55 2 0.340250 139 6 0.1200000 23 1 0.355556 80 6 0.370139 146 6 0.343464 90 6 0.343922 263 6 0.541126 49 6 0.424749 99 6 0.3993813 173 6 0.468538 71 6 0.518773 70 6 0.398539 210 6 0.259199 136 6 0.300184 78 6 0.38663 93 6 0.3755253 246 6 0.3941813 171 6 0.356175 275 6 0.249700 169 6 0.2200855 91 6 0.1428571 61 2 0.2048611 133 4 0.2625616 82 4 0.243609 157 6 0.551493 202 6 0.477859 209 6 0.487248 124 6 0.567464 157 6 0.347101 127 6 0.4770277 0.399388 0.5100584 0.399009 0.467129 0.4580585 0.3850140 0.4686641 0.3235525 0.4653159 0.4881408 0.4192428 0.3651164 0.4338492 0.3985796 0.2823245 0.406851 0.4318531 0.4161528 0.4649344 0.527656 0.4732512 0.4635153 0.541058 0.490540 0.467313 0.3146695 0.4301113 0.444784 0.4426368 0.4482898 0.4310534 0.2880826 0.1986369 0.14869888 0.2371437 0.3137327 0.1170025 0.587016 0.520201 0.5254269 0.599172 0.3998707 6 0.4943343 0.496110 -0.02036799 6 0.379846 0.425044 -0.0451981 0.9291331 0.10827158 insignificant 1 1.00000 insignificant 0.995794 0.04850624 weaklyHypometh 1 1.00000 insignificant -0.02323170 0.5299733 insignificant 1.00000 insignificant 0.4943343 0.269841 0.1953945 6 0.379846 0.228265 0.15158025 4.7777e-12 9.9835e-01 weaklyHypermeth 1.1088e-10 1.0000e+00 weaklyHypermeth 3.7474e-09 9.9766e-01 weaklyHypermeth 2.4983e-07 1.0000000 weaklyHypermeth 0.15807281 8.4750e-05 lowCoverage 4.1923e-03 lowCoverage 0.4944938 0.5543346 -1.0015e-01 6 0.369079 0.497439 -1.2836e-01 9.9999e-01 1.6109e-09 weaklyHypometh 1.0000e+00 1.5806e-06 weaklyHypometh 9.9996e-01 2.8787e-05 weaklyHypometh 1.0000e+00 9.5958e-03 weaklyHypometh -0.1075480 5.2637e-02 insignificant 9.5703e-01 insignificant 0.496110 0.269841 0.2151552 6 0.425044 0.228265 0.1967783 5.4688e-11 9.9852e-01 hypermethylated 1.4392e-09 1.0000e+00 hypermethylated 2.8390e-08 9.9984e-01 hypermethylated 2.8390e-06 1.000000 hypermethylated 0.1813045 1.3801e-05 lowCoverage 9.8581e-04 lowCoverage 0.4958034 0.5543346 -0.0834923 6 0.384773 0.497439 -0.11266563 9.8791e-01 8.3230e-07 weaklyHypometh 1.0000e+00 0.00041615 weaklyHypometh 9.7998e-01 1.4050e-03 weaklyHypometh 1.0000e+00 0.468326 insignificant -0.0843163 0.10509642 insignificant 1.00000 insignificant 0.2695652 0.5543346 -0.3020253 6 0.210754 0.497439 -0.2866848 9.9999e-01 2.6246e-13 hypomethylated 1.0000000 2.3860e-11 hypomethylated 0.9999961 2.9399e-08 hypomethylated 1.0000 5.8798e-06 hypomethylated -0.2656208 1.0164e-03 lowCoverage 4.2908e-02 lowCoverage chr8 23134650 23135650 29441 TNFRSF10D ENSG00000173530 0.786551 179 7 0.7059393 112 7 0.6982323 62 7 0.572198 138 7 0.90980 66 4 0.705251 113 7 0.6744923 101 7 0.722944 80 7 0.6511905 48 7 0.800000 44 7 0.7288755 230 7 0.7142857 36 3 0.761547 89 7 0.7735479 75 7 0.561905 60 7 0.6857143 21 3 0.666667 3 0 0.673908 206 8 0.641667 63 7 0.742857 73 7 0.928571 27 4 0.770833 12 0 0.7747253 53 3 0.587446 44 6 0.782124 103 6 0.732310 101 5 0.896825 28 4 0.928571 19 0 0.73689 125 7 0.7523810 95 7 0.6233524 86 7 0.588167 82 7 0.626768 106 7 0.5666667 73 6 0.6057460 104 7 0.7500000 4 0 0.6129252 72 7 0.812500 61 7 0.733959 143 7 0.723899 118 7 0.704605 162 7 0.916667 85 3 0.640434 114 7 0.7564849 0.714000 0.8098258 0.705833 0.871778 0.7925001 0.7586005 0.7558733 0.6999064 0.8808989 0.7376325 0.7503121 0.8083974 0.8072293 0.7470305 0.6426966 0.687662 0.7611785 0.6886704 0.8022472 0.908240 0.7839588 0.8042351 0.629792 0.829597 0.679588 0.8303561 0.8707865 0.837135 0.7880150 0.7199916 0.5864942 0.6599705 0.5277154 0.54613638 0.6571502 0.6250401 0.8518258 0.784973 0.774615 0.7316335 0.856742 0.7149321 0 0.7281823 0.741268 -0.01739818 7 0.643554 0.648366 -0.0048118 0.8665535 0.05789380 insignificant 1 1.00000 insignificant 0.970896 0.25575963 insignificant 1 1.00000 insignificant -0.04963795 0.2152897 lowCoverage 1.00000 lowCoverage 0.7284363 0.632458 0.0941531 7 0.657909 0.639951 0.01795813 2.2746e-03 9.7350e-01 weaklyHypermeth 2.4458e-02 1.0000e+00 weaklyHypermeth 4.2874e-02 9.8399e-01 weaklyHypermeth 4.5610e-01 1.0000000 insignificant 0.04644449 3.1544e-01 insignificant 1.0000e+00 insignificant 0.7305962 0.7379421 3.3159e-03 7 0.718782 0.708686 1.0096e-02 4.9136e-01 2.4174e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.7984e-01 3.6197e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0350338 5.0833e-01 insignificant 1.0000e+00 insignificant 0.742561 0.633333 0.1110114 7 0.739275 0.672683 0.0665919 8.2786e-03 1.0000e+00 weaklyHypermeth 8.0374e-02 1.0000e+00 weaklyHypermeth 7.0317e-02 1.0000e+00 insignificant 6.9620e-01 1.000000 insignificant 0.0960824 8.9799e-02 lowCoverage 9.5531e-01 lowCoverage 0.7425228 0.7379421 0.0227351 7 0.733146 0.708686 0.02446049 8.0063e-02 6.8695e-01 insignificant 1.0000e+00 1.00000000 insignificant 3.2746e-01 8.0815e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0146042 0.80550160 lowCoverage 1.00000 lowCoverage 0.6322115 0.7379421 -0.0847670 7 0.628502 0.708686 -0.0801839 9.3535e-01 3.5637e-03 weaklyHypometh 1.0000000 4.6891e-02 weaklyHypometh 0.9992794 6.4835e-03 weaklyHypometh 1.0000 1.1374e-01 insignificant -0.0814783 2.1408e-01 insignificant 1.0000e+00 insignificant chr8 23268350 23269350 29448 R3HCC1 ENSG00000104679 0.745926 121 5 0.7460594 123 5 0.5200000 35 3 0.660394 105 5 0.78000 23 2 0.682206 85 5 0.4400000 30 5 0.712063 52 5 0.6914286 34 4 0.681548 32 4 0.7647727 115 4 0.4166667 12 0 0.654167 36 4 0.5628571 29 4 0.730000 24 1 1.0000000 2 0 1.000000 8 1 0.674872 62 4 0.562500 44 4 0.719444 46 5 0.750000 6 0 0.666667 3 0 0.6695447 65 5 0.960000 9 1 0.533333 15 0 0.718280 152 5 0.750000 7 0 0.375000 7 0 0.60440 47 5 0.6905316 123 4 0.7236617 104 4 0.816883 62 5 0.517949 56 5 0.5654762 28 3 0.4993333 124 4 0.4166667 10 0 0.6022222 47 5 0.686111 55 4 0.682372 107 5 0.730159 116 5 0.724664 103 5 0.593182 84 4 0.783605 95 5 0.7555556 0.703831 0.6400000 0.685027 0.900000 0.6822059 0.4800000 0.6197552 0.7428571 0.7940476 0.7467596 0.5299750 0.8750000 0.5428571 0.8500000 0.7108495 NA 0.6933333 0.4625000 0.7111111 0.800000 0.5801913 0.6571429 0.960000 0.633333 0.682622 0.8000000 0.4000000 0.670330 0.6838649 0.7811330 0.7727273 0.4679487 0.7214286 0.53933333 0.4685333 0.6777778 0.6400000 0.794167 0.684211 0.6396825 0.660606 0.8125874 0 0.6601179 0.705000 -0.01658269 5 0.668744 0.762913 -0.0941683 0.7967085 0.19077757 insignificant 1 1.00000 insignificant 0.760099 0.42515983 insignificant 1 1.00000 insignificant -0.00094623 0.9859781 lowCoverage 1.00000 lowCoverage 0.6610837 0.534375 0.1038177 4 0.724646 0.555749 0.16889718 1.5285e-05 7.7210e-01 lowCoverage 2.1528e-04 1.0000e+00 lowCoverage 3.8670e-02 9.2719e-01 lowCoverage 4.1589e-01 1.0000000 lowCoverage 0.13928550 1.5356e-02 lowCoverage 2.3993e-01 lowCoverage 0.6601179 0.6099010 -3.3466e-03 5 0.668744 0.766017 -9.7273e-02 8.4737e-01 4.9526e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.4076e-01 6.3198e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0155512 7.3966e-01 lowCoverage 1.0000e+00 lowCoverage 0.704013 0.534375 0.1347269 4 0.723398 0.555749 0.1676491 7.6933e-06 7.4122e-01 lowCoverage 1.2212e-04 1.0000e+00 lowCoverage 2.1467e-02 9.5806e-01 lowCoverage 2.5256e-01 1.000000 lowCoverage 0.1402317 2.5266e-02 lowCoverage 3.4611e-01 lowCoverage 0.7050000 0.6099010 -0.0025699 5 0.762913 0.766017 -0.00310473 9.3816e-01 9.2229e-01 insignificant 1.0000e+00 1.00000000 insignificant 8.5423e-01 9.8339e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0146049 0.78473631 lowCoverage 1.00000 lowCoverage 0.5343750 0.6091270 -0.1990611 4 0.555749 0.727020 -0.1712712 7.4830e-01 1.6441e-03 lowCoverage 1.0000000 2.3156e-02 lowCoverage 0.9607936 7.9680e-02 lowCoverage 1.0000 8.3874e-01 lowCoverage -0.1548367 1.2056e-02 lowCoverage 2.2325e-01 lowCoverage chr8 23396750 23397750 29452 ENTPD4 ENSG00000197217 0.822073 266 9 0.8338919 147 9 0.8547009 86 9 0.935927 317 9 0.81667 69 6 0.921217 285 9 0.7982168 95 10 0.843236 151 5 0.7578788 197 10 0.808195 254 10 0.8637571 153 9 0.7692308 78 6 0.850039 276 10 0.8242424 149 10 0.830952 187 10 0.6071429 30 1 0.800000 33 1 0.785069 476 9 0.933669 156 5 0.795078 182 9 0.724343 59 5 0.810899 142 9 0.7821146 147 10 0.816919 61 5 0.867429 103 9 0.952420 182 9 0.652177 136 8 0.786183 61 8 0.76928 241 5 0.9640811 279 7 0.9058442 187 9 0.931473 248 9 0.657623 210 10 0.9607027 123 9 0.8750000 5 0 1.0000000 17 0 0.8329365 81 7 0.945982 169 5 0.972435 336 9 0.928609 256 9 0.906020 241 9 0.907864 260 9 0.878736 294 9 0.9281934 0.888953 0.8672990 0.949170 0.951162 0.9238380 0.9028837 0.8763350 0.8931030 0.9141405 0.8662242 0.8597575 0.9638029 0.9386692 0.9270631 0.8232228 0.920060 0.9074729 0.9618944 0.8921827 0.840875 0.8409657 0.8391430 0.800905 0.887435 0.971643 0.7297793 0.8679948 0.911129 0.9697709 0.9201907 0.9314794 0.8017672 0.9572098 0.93209897 1.0000000 0.9494003 0.9536520 0.971584 0.933667 0.9374686 0.900066 0.8912325 4 0.8762197 0.888949 0.01858021 9 0.808109 0.807081 0.0010284 0.3059413 0.63666211 insignificant 1 1.00000 insignificant 0.319507 0.23310256 insignificant 1 1.00000 insignificant -0.00770407 0.8122978 insignificant 1.00000 insignificant 0.8762197 0.882645 0.0145373 6 0.808109 0.785512 0.02259784 1.7408e-01 9.4722e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9956e-01 5.2637e-02 insignificant 1.0000e+00 1.0000000 insignificant -0.05614822 3.3075e-01 insignificant 1.0000e+00 insignificant 0.9089069 0.9228551 -1.8350e-02 9 0.897899 0.920917 -2.3018e-02 8.2308e-01 5.0210e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 8.5906e-01 1.0145e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0961737 7.5837e-04 weaklyHypometh 8.4263e-02 weaklyHypometh 0.888949 0.882645 -0.0020625 6 0.807081 0.785512 0.0215695 4.4348e-01 7.5246e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7583e-01 5.9951e-02 insignificant 1.0000e+00 1.000000 insignificant -0.0484442 4.2554e-01 insignificant 1.0000e+00 insignificant 0.8976464 0.9228551 -0.0342770 9 0.890909 0.920917 -0.03000867 9.6229e-01 9.8462e-02 insignificant 1.0000e+00 1.00000000 insignificant 6.8692e-01 2.1811e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0884696 0.01406120 weaklyHypometh 0.45359 insignificant 0.8989899 0.9228551 -0.0313055 6 0.872791 0.920917 -0.0481268 9.9745e-01 9.5635e-02 insignificant 1.0000000 7.6508e-01 insignificant 0.1903115 9.9454e-01 insignificant 1.0000 1.0000e+00 insignificant -0.0400254 4.7898e-01 insignificant 1.0000e+00 insignificant chr8 23435150 23436150 29461 ENTPD4 ENSG00000197217 0.668227 436 10 0.5311834 318 11 0.5271564 216 10 0.630944 281 10 0.57897 163 10 0.595186 640 11 0.5578775 193 10 0.603898 207 11 0.5589869 172 10 0.495693 155 10 0.5690793 370 11 0.5009833 219 10 0.565686 201 10 0.6895105 70 4 0.550960 258 10 0.6843595 121 10 0.424575 308 10 0.669613 295 10 0.573187 278 11 0.663677 599 10 0.516669 139 10 0.583992 250 10 0.5892937 340 10 0.544178 210 11 0.562140 167 10 0.573395 289 11 0.472038 342 10 0.585163 176 10 0.59958 174 11 0.5890766 334 11 0.6597653 300 11 0.595830 693 10 0.521792 220 11 0.5625978 141 10 0.5848199 236 10 0.6017018 85 8 0.4174811 216 10 0.599191 318 11 0.641268 653 10 0.645559 457 10 0.580549 342 10 0.648230 376 10 0.685768 401 10 0.7511750 0.658800 0.6124199 0.713176 0.700567 0.7390904 0.6956664 0.6854793 0.6169244 0.5717593 0.6499300 0.5712402 0.6485293 0.7273483 0.6922528 0.7248237 0.482367 0.7462799 0.6593110 0.7495098 0.608703 0.6677034 0.7255619 0.677896 0.651640 0.708708 0.5949243 0.6848813 0.692083 0.7324346 0.7350130 0.7420175 0.6119579 0.6413201 0.66684334 0.7430828 0.5526406 0.6918996 0.735419 0.740306 0.7328622 0.718964 0.7757283 10 0.6967273 0.690797 0.00763808 10 0.575019 0.559313 0.0157061 0.1345921 0.57928934 insignificant 1 1.00000 insignificant 0.326227 0.24874111 insignificant 1 1.00000 insignificant 0.00939403 0.6529871 insignificant 1.00000 insignificant 0.6967273 0.622735 0.0552675 10 0.575019 0.520865 0.05415419 1.0696e-03 9.9604e-01 weaklyHypermeth 1.2294e-02 1.0000e+00 weaklyHypermeth 3.1060e-02 6.7127e-01 weaklyHypermeth 3.5295e-01 1.0000000 insignificant 0.03405698 3.2812e-01 insignificant 1.0000e+00 insignificant 0.6967273 0.7366532 -3.5808e-02 10 0.575019 0.601110 -2.6091e-02 9.8081e-01 1.6183e-02 weaklyHypometh 1.0000e+00 7.0677e-01 insignificant 9.9797e-01 2.5445e-03 weaklyHypometh 1.0000e+00 3.6350e-01 insignificant -0.0582875 2.6734e-02 weaklyHypometh 6.8549e-01 insignificant 0.690685 0.622533 0.0482669 10 0.554750 0.519260 0.0354906 3.0886e-02 9.9696e-01 weaklyHypermeth 2.6858e-01 1.0000e+00 insignificant 3.2821e-01 9.6950e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0246630 4.6165e-01 insignificant 1.0000e+00 insignificant 0.6907972 0.7366532 -0.0437959 10 0.559313 0.601110 -0.04179683 9.6342e-01 2.2104e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant 9.9239e-01 3.1875e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.0676816 0.01163576 weaklyHypometh 0.40123 insignificant 0.6227348 0.7366532 -0.0896732 10 0.520865 0.601110 -0.0802450 9.9993e-01 1.0857e-04 weaklyHypometh 1.0000000 2.1289e-03 weaklyHypometh 0.9994354 3.8197e-03 weaklyHypometh 1.0000 7.6395e-02 weaklyHypometh -0.0923445 2.4718e-02 weaklyHypometh 3.6350e-01 insignificant chr8 23460950 23461950 29465 SLC25A37 ENSG00000147454 0.630459 236 12 0.5673313 329 9 0.5942052 86 6 0.676141 208 12 0.54671 87 9 0.645712 366 11 0.5791471 111 9 0.709978 148 8 0.5500000 87 8 0.550000 63 4 0.7150193 287 8 0.5836601 48 4 0.677421 128 9 0.5916850 82 8 0.619048 96 9 0.6507240 53 3 0.452778 91 6 0.651501 211 11 0.801291 141 9 0.684273 322 11 0.555556 37 4 0.318182 12 1 0.6769993 191 10 0.544974 67 6 0.727398 69 4 0.691582 261 9 0.724256 56 6 0.547840 52 4 0.72540 181 9 0.6652112 328 8 0.6668582 286 8 0.741093 230 11 0.400431 233 9 0.5214524 145 8 0.4542088 246 9 0.3333333 14 0 0.3702228 256 8 0.540581 251 8 0.657486 308 12 0.577196 271 12 0.704785 200 11 0.597071 132 10 0.608742 214 12 0.7842162 0.699466 0.6554220 0.778443 0.574614 0.7583027 0.5062227 0.6645866 0.6016407 0.5462185 0.7201507 0.5484154 0.6683215 0.6624127 0.6953581 0.5524315 0.543730 0.7326618 0.8024955 0.7840277 0.710378 NA 0.7767352 0.613165 0.788533 0.672470 0.7111226 0.4505135 0.756911 0.6595763 0.7865088 0.8627587 0.5878925 0.6119567 0.60230880 0.3210465 0.5424631 0.6557615 0.720218 0.771070 0.8233974 0.622277 0.7344133 1 0.7066415 0.756497 -0.03483952 8 0.598599 0.658419 -0.0598193 0.9955036 0.04919632 weaklyHypometh 1 1.00000 insignificant 0.837157 0.17756916 insignificant 1 1.00000 insignificant -0.00825788 0.8364110 insignificant 1.00000 insignificant 0.7217944 0.344105 0.3276317 8 0.637857 0.428834 0.20902217 4.4801e-22 8.1297e-01 hypermethylated 2.2400e-20 1.0000e+00 hypermethylated 9.0023e-06 8.0432e-01 hypermethylated 2.5006e-04 1.0000000 hypermethylated 0.18714958 1.2861e-03 weaklyHypermeth 3.4759e-02 weaklyHypermeth 0.7066415 0.7591111 -3.5000e-02 9 0.598599 0.628598 -2.9999e-02 7.6288e-01 2.6492e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.1855e-01 1.5215e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0052016 8.6081e-01 insignificant 1.0000e+00 insignificant 0.758918 0.344105 0.3820366 8 0.670490 0.428834 0.2416553 7.7063e-18 9.9394e-01 hypermethylated 4.5331e-16 1.0000e+00 hypermethylated 5.4647e-05 9.4724e-01 hypermethylated 1.2709e-03 1.000000 hypermethylated 0.1954075 1.3368e-03 weaklyHypermeth 3.3638e-02 weaklyHypermeth 0.7564972 0.7591111 -0.0056758 8 0.658419 0.628598 0.02982042 3.0009e-01 8.2948e-01 insignificant 1.0000e+00 1.00000000 insignificant 6.7896e-01 7.6781e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0030563 0.94328033 insignificant 1.00000 insignificant 0.3441048 0.7920398 -0.4662620 8 0.428834 0.672178 -0.2433433 7.8743e-01 1.3593e-13 hypomethylated 1.0000000 1.5104e-11 hypomethylated 0.9321750 8.8255e-04 hypomethylated 1.0000 2.5504e-02 hypomethylated -0.1923511 1.3749e-03 weaklyHypometh 5.2881e-02 weaklyHypometh chr8 23461050 23462050 29466 SLC25A37 ENSG00000147454 0.646398 243 12 0.5673313 329 9 0.5942052 86 6 0.719322 214 12 0.47696 96 10 0.645712 366 11 0.5242893 119 9 0.697204 156 9 0.5750000 94 9 0.474359 72 4 0.7466319 302 10 0.5836601 48 4 0.649708 137 10 0.5916850 82 8 0.654762 102 9 0.6233197 55 3 0.388095 92 6 0.614634 220 12 0.746511 148 10 0.631637 323 11 0.612500 51 6 0.659091 16 1 0.6636184 196 10 0.525433 77 7 0.776962 73 4 0.709652 272 11 0.724256 56 6 0.552294 71 6 0.72987 188 9 0.6245215 337 9 0.7015485 294 8 0.742365 233 11 0.400431 233 9 0.5022004 150 8 0.5073232 250 9 0.4814815 20 0 0.3488894 268 9 0.519678 261 9 0.638374 314 12 0.577196 271 12 0.630495 209 11 0.597071 132 10 0.640826 220 12 0.7842162 0.699466 0.6554220 0.778443 0.574614 0.7583027 0.5062227 0.6645866 0.6016407 0.5462185 0.7201507 0.5484154 0.6683215 0.6624127 0.6953581 0.5524315 0.543730 0.7326618 0.8024955 0.7840277 0.710378 NA 0.7767352 0.613165 0.788533 0.672470 0.7111226 0.4505135 0.756911 0.6595763 0.7865088 0.8627587 0.5878925 0.6119567 0.60230880 0.3210465 0.5424631 0.6557615 0.720218 0.771070 0.8233974 0.622277 0.7344133 1 0.7022249 0.752682 -0.03760071 8 0.562785 0.652497 -0.0897120 0.9986108 0.01934491 weaklyHypometh 1 1.00000 insignificant 0.946649 0.04156691 weaklyHypometh 1 1.00000 insignificant -0.06093822 0.0551773 insignificant 1.00000 insignificant 0.7165966 0.349408 0.3173962 8 0.584718 0.446539 0.13817840 2.3049e-20 8.1025e-01 hypermethylated 1.0976e-18 1.0000e+00 hypermethylated 8.2132e-05 7.7331e-01 hypermethylated 1.7111e-03 1.0000000 hypermethylated 0.14757074 1.4570e-03 weaklyHypermeth 3.7391e-02 weaklyHypermeth 0.7022249 0.7565445 -3.6100e-02 9 0.562785 0.596847 -3.4062e-02 8.9717e-01 3.5165e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4345e-01 1.7269e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0092212 7.0605e-01 insignificant 1.0000e+00 insignificant 0.754913 0.349408 0.3731179 8 0.660415 0.446539 0.2138762 2.5847e-17 9.9850e-01 hypermethylated 1.3604e-15 1.0000e+00 hypermethylated 4.7490e-05 9.8909e-01 hypermethylated 1.1738e-03 1.000000 hypermethylated 0.2085090 1.1218e-04 hypermethylated 4.8773e-03 hypermethylated 0.7526824 0.7565445 -0.0041850 8 0.652497 0.596847 0.05564953 2.4986e-01 9.0587e-01 insignificant 1.0000e+00 1.00000000 insignificant 6.0182e-01 8.8563e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0517170 0.06241373 insignificant 1.00000 insignificant 0.3494078 0.7884990 -0.4566005 8 0.446539 0.623043 -0.1765034 8.2239e-01 1.5057e-12 hypomethylated 1.0000000 1.0755e-10 hypomethylated 0.9545683 1.9857e-03 weaklyHypometh 1.0000 4.3167e-02 weaklyHypometh -0.1567919 1.5450e-03 weaklyHypometh 5.5486e-02 weaklyHypometh chr8 23542050 23543050 29472 ENSG00000215298 0.868710 380 9 0.7927125 243 9 0.8176215 154 10 0.863631 263 7 0.79628 92 8 0.741934 389 10 0.8429603 126 8 0.781441 199 9 0.6694696 132 8 0.708131 125 10 0.7788975 360 10 0.7071032 74 8 0.851133 160 10 0.8539683 47 3 0.890236 120 8 0.7328283 65 6 0.737286 62 5 0.804908 241 7 0.824028 286 9 0.689134 393 10 0.810975 93 7 0.731025 127 7 0.7618449 196 7 0.898044 117 6 0.892115 76 3 0.884364 229 7 0.822500 230 8 0.650316 84 4 0.69518 140 8 0.8285071 212 7 0.7174665 206 7 0.765329 380 10 0.668242 212 10 0.6696612 133 8 0.8319737 304 9 0.6611111 59 6 0.6488108 261 7 0.817137 197 9 0.871152 480 7 0.899739 311 7 0.865386 300 7 0.911831 263 7 0.871704 313 7 0.8566811 0.790496 0.8504536 0.874572 0.816429 0.8630474 0.8277782 0.8050804 0.7744914 0.7933131 0.8698534 0.7237636 0.9160673 0.8369233 0.9497209 0.8138097 0.872422 0.8859033 0.8546057 0.8344536 0.693373 0.8335067 0.8177734 0.897193 0.882540 0.859976 0.8206028 0.7660725 0.782494 0.8571362 0.8233144 0.8739365 0.7019951 0.6625325 0.82260415 0.7892206 0.7560984 0.8310084 0.872548 0.877575 0.8993876 0.921004 0.8746169 5 0.8350805 0.819052 0.02570335 7 0.681715 0.731659 -0.0499446 0.3371584 0.74200852 insignificant 1 1.00000 insignificant 0.777281 0.38870360 insignificant 1 1.00000 insignificant -0.00051840 0.9852229 insignificant 1.00000 insignificant 0.8355078 0.773585 0.0723701 9 0.738524 0.716944 0.02158009 3.7222e-05 6.9926e-01 weaklyHypermeth 4.8208e-04 1.0000e+00 weaklyHypermeth 2.3062e-02 7.8398e-01 weaklyHypermeth 2.9192e-01 1.0000000 insignificant 0.07146457 9.8500e-02 insignificant 1.0000e+00 insignificant 0.8362798 0.8698260 -4.1634e-02 7 0.819562 0.895465 -7.5903e-02 9.9991e-01 1.0400e-03 weaklyHypometh 1.0000e+00 1.3000e-01 insignificant 9.9994e-01 2.3654e-04 weaklyHypometh 1.0000e+00 3.9424e-02 weaklyHypometh -0.0963417 1.4770e-05 weaklyHypometh 3.8153e-03 weaklyHypometh 0.819271 0.773585 0.0502247 7 0.737075 0.716944 0.0201311 2.5079e-02 8.3666e-01 weaklyHypermeth 2.1999e-01 1.0000e+00 insignificant 5.4582e-02 9.9211e-01 insignificant 5.6270e-01 1.000000 insignificant 0.0719830 1.1568e-01 insignificant 1.0000e+00 insignificant 0.8205005 0.8698260 -0.0644227 7 0.804490 0.895465 -0.09097488 9.8896e-01 2.5757e-03 weaklyHypometh 1.0000e+00 0.40134489 insignificant 9.9169e-01 2.8946e-03 weaklyHypometh 1.0000e+00 0.723661 insignificant -0.0958233 0.00199144 weaklyHypometh 0.20108 insignificant 0.7740550 0.8698260 -0.1133829 7 0.760333 0.895465 -0.1351322 9.9735e-01 4.1471e-05 weaklyHypometh 1.0000000 8.8237e-04 weaklyHypometh 0.9966430 2.8868e-04 weaklyHypometh 1.0000 1.2028e-02 weaklyHypometh -0.1678063 3.7885e-03 weaklyHypometh 9.7785e-02 weaklyHypometh chr8 24854550 24855550 29492 NEFM ENSG00000104722 0.095833 214 7 0.1602282 184 6 0.0308962 262 6 0.308387 195 6 0.00625 240 6 0.140310 345 7 0.1590424 199 6 0.010069 311 6 0.0151676 331 6 0.058606 405 6 0.1532738 217 6 0.0166583 317 6 0.019310 213 6 0.0056497 240 6 0.152557 432 6 0.0210980 317 6 0.110152 42 4 0.275661 210 7 0.019383 208 6 0.138250 232 7 0.011905 95 6 0.025275 174 6 0.2081280 149 6 0.058083 119 6 0.193517 108 6 0.158882 274 6 0.053184 301 7 0.191810 164 6 0.10397 195 6 0.0140426 331 6 0.0295632 281 6 0.177519 198 7 0.096970 156 6 0.0079365 94 6 0.0028011 249 6 0.0625000 52 6 0.0313102 163 6 0.084296 184 6 0.139358 204 7 0.052051 152 6 0.113611 164 6 0.197764 133 6 0.099118 192 9 0.0104794 0.020601 0.0303318 0.013913 0.008233 0.0957263 0.0188101 0.0097940 0.0142426 0.0218942 0.0117554 0.0157676 0.0229220 0.0049690 0.0115568 0.0327404 0.119864 0.0190807 0.0185783 0.0889148 0.011761 0.0250171 0.0343680 0.026067 0.058191 0.018709 0.0160698 0.0062318 0.010096 0.0165276 0.0308038 0.0419584 0.0281003 0.0100402 0.00354359 0.0602410 0.0382233 0.0157763 0.060881 0.018972 0.0232988 0.061516 0.0392241 6 0.0340575 0.028057 0.00559220 6 0.169180 0.202593 -0.0334128 0.4740371 0.85535902 insignificant 1 1.00000 insignificant 0.823684 0.36456371 insignificant 1 1.00000 insignificant -0.00731719 0.8116134 insignificant 1.00000 insignificant 0.0292490 0.021158 0.0101291 6 0.107872 0.057234 0.05063734 2.2862e-01 5.8137e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.7877e-02 8.3189e-01 weaklyHypermeth 3.3135e-01 1.0000000 insignificant 0.04720353 8.3295e-02 insignificant 9.4653e-01 insignificant 0.0320425 0.0579882 -1.1965e-02 6 0.107275 0.102047 5.2283e-03 9.1647e-01 1.4521e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3211e-01 5.9080e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0255412 4.3358e-01 insignificant 1.0000e+00 insignificant 0.025253 0.021158 0.0040691 6 0.080266 0.057234 0.0230311 1.0410e-01 9.1519e-01 insignificant 8.0700e-01 1.0000e+00 insignificant 2.2377e-02 9.7197e-01 weaklyHypermeth 2.6020e-01 1.000000 insignificant 0.0545207 6.8130e-02 insignificant 7.6551e-01 insignificant 0.0241015 0.0581114 -0.0182847 6 0.099994 0.115058 -0.01506407 9.7108e-01 9.1841e-02 insignificant 1.0000e+00 1.00000000 insignificant 9.4537e-01 4.3534e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0182241 0.59196075 insignificant 1.00000 insignificant 0.0190797 0.0402010 -0.0217694 6 0.019155 0.042300 -0.0231455 7.8163e-01 7.2907e-02 insignificant 1.0000000 6.1267e-01 insignificant 0.9353862 1.0890e-01 insignificant 1.0000 1.0000e+00 insignificant -0.0727448 3.9006e-02 weaklyHypometh 4.9360e-01 insignificant chr8 26565150 26566150 29549 DPYSL2 ENSG00000092964 0.934753 439 4 0.8799956 339 5 0.8733333 65 4 0.945623 362 5 0.97143 59 4 0.949719 425 5 0.9468217 161 4 0.816954 103 4 0.8878788 77 4 0.713943 50 4 0.9245813 214 5 0.9444444 36 4 0.977273 43 4 0.9791667 43 4 0.978480 89 4 0.9750000 35 3 NA 0 0 0.945187 435 4 0.972510 213 4 0.953581 305 5 0.772247 66 4 0.950000 23 3 0.8086735 168 5 0.930476 58 4 0.897500 66 4 0.942213 217 5 0.892631 88 4 0.989474 61 4 0.96424 253 4 0.9832245 259 5 0.9185065 301 5 0.893282 303 5 0.950000 189 5 0.8744454 118 4 0.9029762 395 5 0.6730769 30 1 0.7009875 153 5 0.926478 231 5 0.974383 460 5 0.969473 334 5 0.985854 404 5 0.955532 540 4 0.980973 320 5 0.9224430 0.889590 0.8419414 0.927513 0.972527 0.9401164 0.9308502 0.9043514 0.8665501 0.8311068 0.9406811 0.9481074 0.9750250 0.9771062 0.9795214 0.9725275 NA 0.9360444 0.9665435 0.9785807 0.924668 0.9519231 0.9567308 0.906698 0.877747 0.921128 0.8678077 0.9864083 0.955902 0.9769988 0.9213248 0.9164921 1.0000000 0.9696949 0.92273352 0.9919136 0.9797438 0.9812621 0.968706 0.959974 0.9820896 0.958544 0.9742432 4 0.9289805 0.931830 -0.00395500 4 0.944281 0.833663 0.1106173 0.8849039 0.58416892 lowCoverage 1 1.00000 lowCoverage 0.866118 0.83408310 lowCoverage 1 1.00000 lowCoverage 0.01289999 0.6026821 lowCoverage 1.00000 lowCoverage 0.9288787 0.923630 -0.0222738 4 0.910849 0.900324 0.01052442 5.9059e-01 3.9603e-04 lowCoverage 1.0000e+00 4.9504e-02 lowCoverage 7.7349e-01 4.0019e-03 lowCoverage 1.0000e+00 0.4035538 lowCoverage 0.08677829 1.4160e-01 lowCoverage 1.0000e+00 lowCoverage 0.9288787 0.9689018 -3.9450e-02 4 0.910849 0.973954 -6.3106e-02 9.9993e-01 1.6408e-03 lowCoverage 1.0000e+00 1.6408e-01 lowCoverage 9.9609e-01 2.0600e-02 lowCoverage 1.0000e+00 8.2400e-01 lowCoverage -0.0484707 7.0625e-03 lowCoverage 3.3631e-01 lowCoverage 0.932651 0.923630 -0.0162495 4 0.933861 0.900324 0.0335367 1.5805e-01 2.3881e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 3.5329e-01 9.6064e-03 lowCoverage 1.0000e+00 1.000000 lowCoverage 0.0738783 2.0509e-01 lowCoverage 1.0000e+00 lowCoverage 0.9326509 0.9689018 -0.0359292 4 0.933861 0.973954 -0.04009336 9.9911e-01 8.2136e-03 lowCoverage 1.0000e+00 0.58668773 lowCoverage 9.3576e-01 9.6823e-02 lowCoverage 1.0000e+00 1.000000 lowCoverage -0.0613707 0.00856251 lowCoverage 0.33350 lowCoverage 0.9236298 0.9689018 -0.0411504 5 0.900324 0.973954 -0.0736300 3.2688e-02 2.5490e-01 inconclusive 1.0000000 1.0000e+00 insignificant 0.0226256 3.4864e-01 inconclusive 1.0000 1.0000e+00 insignificant -0.1352490 3.9488e-02 lowCoverage 4.9360e-01 lowCoverage chr8 27272850 27273850 29560 ENSG00000197825 0.868488 115 5 0.6148148 76 4 0.7294118 37 2 0.917694 104 5 0.80595 43 5 0.947477 135 5 0.9095238 23 2 0.847988 72 5 0.8440000 34 1 0.939394 34 2 0.8740931 106 5 0.8428571 20 1 0.915686 63 2 NA 0 0 0.972727 37 1 0.8571429 8 1 0.850000 12 1 0.915913 110 5 0.875397 60 5 0.934850 117 5 0.626316 30 2 0.931092 45 5 0.7396104 74 5 0.938961 39 4 0.965476 145 5 0.899136 140 5 0.830435 49 5 0.775000 15 1 0.80055 103 4 0.9605634 99 5 0.8838095 109 5 0.777403 114 5 0.908000 85 5 0.9345455 92 5 1.0000000 149 4 0.9333333 125 4 1.0000000 17 1 0.881004 142 5 0.953932 91 5 0.969318 119 5 0.827568 88 5 0.983991 105 4 0.955045 108 5 0.8165368 0.693382 0.6824976 0.828753 0.702576 0.9367386 0.7962529 0.8806977 0.7754098 0.8941878 0.8632614 0.6440281 0.8164577 NA 0.9105812 0.7875476 0.778180 0.8560925 0.8464741 0.9032278 0.635462 0.9356661 0.8020013 0.850543 0.914130 0.876428 0.7309337 0.6803279 0.815999 0.8706996 0.8758782 0.7411113 0.8688525 0.9001490 1.00000000 0.8785792 1.0000000 0.7144399 0.968264 0.951565 0.8932106 0.983373 0.9445586 1 0.8441128 0.852391 0.00002871 5 0.876441 0.881921 -0.0054806 0.7309895 0.65868490 insignificant 1 1.00000 insignificant 0.698870 0.65141277 insignificant 1 1.00000 insignificant 0.02246621 0.5352700 lowCoverage 1.00000 lowCoverage 0.8441128 0.913115 -0.0251240 5 0.876441 0.930928 -0.05448701 9.8780e-01 6.0610e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9650e-01 6.0902e-02 insignificant 1.0000e+00 1.0000000 insignificant -0.07631850 1.4110e-02 lowCoverage 2.2758e-01 lowCoverage 0.8441128 0.9471624 -1.0260e-01 5 0.876441 0.937941 -6.1501e-02 9.8802e-01 3.5721e-03 weaklyHypometh 1.0000e+00 2.7874e-01 insignificant 9.2067e-01 7.0655e-03 weaklyHypometh 1.0000e+00 5.8879e-01 insignificant -0.0714757 6.8135e-02 lowCoverage 1.0000e+00 lowCoverage 0.852391 0.913115 -0.0303287 5 0.881921 0.930928 -0.0490064 9.7447e-01 1.6179e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9188e-01 7.2698e-02 insignificant 1.0000e+00 1.000000 insignificant -0.0987847 1.4336e-02 lowCoverage 2.2756e-01 lowCoverage 0.8523909 0.9471624 -0.0930067 5 0.881921 0.937941 -0.05602021 9.7335e-01 7.5283e-03 weaklyHypometh 1.0000e+00 0.57910112 insignificant 9.7291e-01 8.2387e-03 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.0939419 0.04078985 lowCoverage 0.87308 lowCoverage 0.9131148 0.9471624 -0.0525330 5 0.930928 0.937941 -0.0070138 3.9340e-01 4.5725e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.5440385 7.4698e-01 insignificant 1.0000 1.0000e+00 insignificant 0.0048428 8.9174e-01 lowCoverage 1.0000e+00 lowCoverage chr8 27276950 27277950 29562 ENSG00000197825 0.848285 189 6 0.8060635 241 6 0.8318452 85 5 0.929132 188 6 0.94551 62 3 0.900792 419 6 0.6541386 111 4 0.858564 140 6 0.8374485 121 6 0.947572 78 6 0.8976341 294 6 0.6559179 51 3 0.937816 105 5 0.8641223 81 6 0.857686 133 6 0.7491259 35 3 0.550000 9 1 0.871393 184 6 0.882828 203 6 0.904682 284 6 0.940705 79 6 0.848570 81 6 0.9163922 128 6 0.800000 47 5 0.918235 54 4 0.893873 278 6 0.842778 71 4 0.937698 59 5 0.91706 260 6 0.9288586 297 6 0.8894226 325 6 0.910593 263 6 0.846134 195 6 0.7959860 91 5 0.7612846 425 5 0.6250000 12 0 0.7739323 227 6 0.876805 274 6 0.912796 251 6 0.854809 220 6 0.918403 121 6 0.824947 120 6 0.918021 129 6 0.8635675 0.791131 0.8271337 0.936838 0.955128 0.9001222 0.7477733 0.8428357 0.8431901 0.9314731 0.9037382 0.6607209 0.9534382 0.8655340 0.8994048 0.7116778 0.803555 0.8784461 0.9007304 0.9124583 0.891494 0.8295471 0.8971099 0.856410 0.879766 0.893194 0.8145128 0.9315527 0.886873 0.9256470 0.9069890 0.8963009 0.8874036 0.8553729 0.64893262 0.7371378 0.8004781 0.8980296 0.925440 0.871551 0.9288996 0.864790 0.9238217 2 0.8788583 0.890834 -0.01229642 6 0.892389 0.913104 -0.0207145 0.9774875 0.28492103 insignificant 1 1.00000 insignificant 0.983266 0.02296613 weaklyHypometh 1 1.00000 insignificant -0.05882083 0.0381517 weaklyHypometh 1.00000 insignificant 0.8788583 0.756536 0.1137006 6 0.892389 0.811181 0.08120824 1.3780e-06 9.9678e-01 weaklyHypermeth 2.2590e-05 1.0000e+00 weaklyHypermeth 2.5424e-02 9.3390e-01 weaklyHypermeth 3.1388e-01 1.0000000 insignificant 0.05667086 2.1747e-01 lowCoverage 1.0000e+00 lowCoverage 0.8788181 0.9048751 -2.3822e-02 6 0.874454 0.877869 -3.4149e-03 8.3397e-01 1.5503e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9148e-01 8.4436e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0492671 1.2758e-01 insignificant 1.0000e+00 insignificant 0.890834 0.756536 0.1218748 6 0.913104 0.811181 0.1019227 5.9127e-06 9.9997e-01 weaklyHypermeth 9.5367e-05 1.0000e+00 weaklyHypermeth 8.7205e-04 9.9847e-01 weaklyHypermeth 1.6770e-02 1.000000 weaklyHypermeth 0.1154917 2.1456e-02 lowCoverage 3.1095e-01 lowCoverage 0.8907216 0.9048751 -0.0149842 6 0.898621 0.877869 0.02075203 4.2262e-01 1.9039e-01 insignificant 1.0000e+00 1.00000000 insignificant 2.2322e-01 2.9670e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0095538 0.69011787 insignificant 1.00000 insignificant 0.7561375 0.9048751 -0.1510557 6 0.779711 0.877869 -0.0981578 9.6268e-01 4.1478e-04 weaklyHypometh 1.0000000 6.9131e-03 weaklyHypometh 0.9720540 5.1988e-03 weaklyHypometh 1.0000 9.8090e-02 weaklyHypometh -0.1059379 3.3005e-02 lowCoverage 4.4602e-01 lowCoverage chr8 27805450 27806450 29581 PBK ENSG00000168078 0.782470 138 7 0.6390835 110 7 0.6896104 59 7 0.867285 84 7 0.84127 41 3 0.831518 226 7 0.9152494 67 6 0.785714 59 6 0.6785714 30 4 0.820801 68 7 0.8411565 116 7 0.8843537 40 6 0.863095 73 6 NA 0 0 0.861905 73 7 0.9387755 21 2 0.931973 43 6 0.878102 96 7 0.777778 75 7 0.879254 280 7 0.840675 69 5 0.858380 42 5 0.7547310 145 7 0.888992 45 5 0.793333 19 2 0.836630 67 7 0.735786 79 6 0.773810 61 5 0.89087 56 4 0.7505138 61 6 0.7195171 113 7 0.903448 212 7 0.657783 63 5 0.7945887 56 7 1.0000000 57 3 0.9370629 67 6 0.7666754 61 6 0.808333 70 7 0.900958 195 7 0.891510 233 7 0.922149 121 7 0.860763 194 7 0.877334 206 7 0.8481352 0.731217 0.7407025 0.890965 0.890693 0.8525683 0.9138580 0.8870130 0.7055306 0.8828921 0.9090523 0.8917749 0.9124278 NA 0.8679654 0.9025974 0.944960 0.9464749 0.8823954 0.8885715 0.858721 0.8885281 0.8380615 0.897032 0.826687 0.911089 0.8018431 0.7964286 0.923915 0.8514203 0.8542775 0.9203296 0.7141075 0.8802637 1.00000000 0.9223050 0.8471536 0.8971320 0.928965 0.944872 0.9002620 0.906990 0.8834478 3 0.8316657 0.846233 0.00551593 7 0.823251 0.808270 0.0149809 0.6086005 0.62075003 insignificant 1 1.00000 insignificant 0.437868 0.89416592 insignificant 1 1.00000 insignificant 0.01451099 0.5953896 insignificant 1.00000 insignificant 0.8316657 0.850267 0.0078415 5 0.823251 0.800745 0.02250614 3.5688e-01 7.5556e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.6303e-01 5.6977e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.00067221 9.9040e-01 insignificant 1.0000e+00 insignificant 0.8316657 0.8925184 -6.4046e-02 7 0.823251 0.887679 -6.4428e-02 9.9793e-01 1.9790e-02 weaklyHypometh 1.0000e+00 7.0678e-01 insignificant 8.7350e-01 1.2227e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0638078 8.1113e-03 weaklyHypometh 3.4805e-01 insignificant 0.846233 0.850267 0.0063588 5 0.808270 0.800745 0.0075253 5.1403e-01 7.5474e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.1360e-01 3.6124e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0151832 7.8617e-01 insignificant 1.0000e+00 insignificant 0.8462332 0.8925184 -0.0594470 7 0.808270 0.887679 -0.07940839 9.9168e-01 4.0216e-03 weaklyHypometh 1.0000e+00 0.40134489 insignificant 9.5148e-01 6.7718e-03 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.0783188 0.00251982 weaklyHypometh 0.20998 insignificant 0.8502674 0.8925184 -0.0608605 5 0.800745 0.887679 -0.0869337 9.9586e-01 7.8706e-03 weaklyHypometh 1.0000000 8.7451e-02 weaklyHypometh 0.8311556 2.8302e-01 insignificant 1.0000 1.0000e+00 insignificant -0.0631356 2.6914e-01 insignificant 1.0000e+00 insignificant chr8 28262550 28263550 29603 PNOC ENSG00000168081 0.898610 377 8 0.8613687 211 8 0.8747875 209 8 0.932376 314 8 0.79727 162 8 0.949851 319 8 0.8367321 213 7 0.803641 154 8 0.9261842 205 4 0.959676 284 4 0.9210555 179 8 0.9319508 202 5 0.837141 219 8 0.8550460 194 4 0.929432 305 8 0.8165550 162 5 0.890797 79 5 0.937622 474 8 0.943697 225 8 0.979977 263 8 0.791667 44 6 0.915368 120 5 0.9467817 163 8 0.770037 77 8 0.911012 165 7 0.891986 198 8 0.634938 143 7 0.737809 94 8 0.83284 222 8 0.9386252 301 8 0.9386859 225 8 0.911100 297 8 0.808498 194 8 0.8084705 168 5 0.6666667 181 6 0.7653939 74 2 0.5960609 142 5 0.850770 249 8 0.938093 321 8 0.951435 310 8 0.951631 344 8 0.954074 436 8 0.944832 304 8 0.9063703 0.887105 0.8703234 0.938529 0.769090 0.9503318 0.7633799 0.8179965 0.8763471 0.9333838 0.9020830 0.9105313 0.8536041 0.8584850 0.9262634 0.8175017 0.914303 0.9358036 0.9139411 0.9688624 0.684631 0.9168160 0.9391567 0.795356 0.877824 0.847100 0.6308872 0.7206945 0.862208 0.9602467 0.9312557 0.9189210 0.8017871 0.7971438 0.54318924 0.7666979 0.5830652 0.7443675 0.940293 0.954828 0.9484658 0.944479 0.9346660 4 0.8909474 0.875061 0.01816153 8 0.910459 0.789651 0.1208083 0.6646049 0.34879348 insignificant 1 1.00000 insignificant 0.355268 0.43369904 insignificant 1 1.00000 insignificant 0.04245064 0.1921078 insignificant 1.00000 insignificant 0.8909474 0.740079 0.1666221 8 0.910459 0.716321 0.19413864 1.1485e-04 7.0342e-01 weaklyHypermeth 1.3838e-03 1.0000e+00 weaklyHypermeth 8.6974e-02 5.6341e-01 insignificant 8.4440e-01 1.0000000 insignificant 0.14487830 1.3428e-02 weaklyHypermeth 2.2221e-01 insignificant 0.8909244 0.9393586 -5.1708e-02 8 0.899267 0.946265 -4.6998e-02 9.7622e-01 7.2106e-03 weaklyHypometh 1.0000e+00 4.2415e-01 insignificant 9.7289e-01 3.2442e-03 weaklyHypometh 1.0000e+00 3.6640e-01 insignificant -0.0538248 3.7485e-04 weaklyHypometh 5.2905e-02 weaklyHypometh 0.875061 0.740079 0.1369910 8 0.789651 0.716321 0.0733304 4.9995e-03 6.6417e-01 weaklyHypermeth 5.3187e-02 1.0000e+00 weaklyHypermeth 1.0645e-01 8.7549e-01 insignificant 9.9484e-01 1.000000 insignificant 0.1024277 6.2970e-02 insignificant 7.3148e-01 insignificant 0.8767726 0.9393586 -0.0658187 8 0.888357 0.946265 -0.05790756 3.5018e-01 2.0246e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant 6.0875e-01 7.7252e-03 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.0962755 0.00623023 weaklyHypometh 0.28319 insignificant 0.7408143 0.9393586 -0.2027065 8 0.805861 0.946265 -0.1404042 9.9335e-01 1.8937e-02 weaklyHypometh 1.0000000 1.8856e-01 insignificant 0.9981176 5.7733e-02 insignificant 1.0000 6.8729e-01 insignificant -0.1987031 4.1226e-03 weaklyHypometh 1.0055e-01 insignificant chr8 28294550 28295550 29606 PNOC ENSG00000168081 0.742553 317 10 0.6860962 281 7 0.6520408 153 7 0.783397 205 10 0.75583 116 7 0.834754 347 11 0.7436767 171 7 0.842695 126 7 0.7369157 138 7 0.713912 96 6 0.8067340 246 7 0.7764411 115 7 0.719430 126 7 0.7222222 18 1 0.797774 143 7 0.7474359 77 7 0.784014 86 7 0.840338 154 11 0.795645 278 10 0.771886 271 11 0.697210 67 5 0.886905 40 5 0.8028600 226 11 0.730384 94 4 0.916667 23 2 0.792650 380 11 0.828773 70 6 0.620136 51 4 0.71234 137 5 0.7565105 398 11 0.7746250 338 11 0.758662 413 12 0.575712 122 6 0.7844215 118 6 0.6725936 378 12 0.6313131 53 4 0.7186111 92 6 0.748768 332 12 0.706675 308 11 0.656350 371 10 0.720814 253 11 0.791859 272 9 0.810216 300 10 0.8360759 0.688758 0.6562556 0.835371 0.739555 0.8617198 0.8229282 0.8453662 0.7799409 0.7733537 0.8408059 0.8200141 0.8376296 NA 0.8089347 0.8356313 0.767442 0.8817998 0.8913953 0.8289725 0.807655 0.9120620 0.8095307 0.824150 0.935535 0.831726 0.8385611 0.7977166 0.790487 0.8196008 0.8715916 0.8437189 0.5925375 0.7500925 0.59852491 0.3417191 0.8447799 0.7789155 0.820507 0.710347 0.7809535 0.815522 0.8292124 4 0.8021946 0.810569 -0.02100679 6 0.671145 0.676750 -0.0056047 0.7224453 0.64025266 insignificant 1 1.00000 insignificant 0.923746 0.34515331 insignificant 1 1.00000 insignificant -0.01045408 0.6941626 insignificant 1.00000 insignificant 0.8024263 0.711416 0.0836095 7 0.719084 0.679330 0.03975370 8.1584e-05 6.6763e-01 weaklyHypermeth 1.0072e-03 1.0000e+00 weaklyHypermeth 2.7524e-02 9.2425e-01 weaklyHypermeth 3.3135e-01 1.0000000 insignificant 0.07411958 6.7038e-02 insignificant 8.0768e-01 insignificant 0.8026582 0.7546543 1.7692e-02 6 0.774398 0.708644 6.5753e-02 5.1625e-04 7.9623e-01 weaklyHypermeth 2.1511e-02 1.0000e+00 weaklyHypermeth 2.3195e-01 8.4515e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0255066 4.3892e-01 insignificant 1.0000e+00 insignificant 0.810932 0.711416 0.0887051 9 0.725089 0.679330 0.0457587 5.0895e-04 7.3047e-01 weaklyHypermeth 6.4424e-03 1.0000e+00 weaklyHypermeth 1.2974e-02 9.9914e-01 weaklyHypermeth 1.5822e-01 1.000000 insignificant 0.0845737 5.5953e-02 insignificant 6.7413e-01 insignificant 0.8108472 0.7546543 0.0247099 9 0.703942 0.708644 -0.00470261 1.7988e-03 7.5009e-01 weaklyHypermeth 8.1765e-02 1.00000000 weaklyHypermeth 3.2343e-02 9.8814e-01 weaklyHypermeth 1.0000e+00 1.000000 insignificant 0.0359607 0.35251397 insignificant 1.00000 insignificant 0.7111517 0.7546543 -0.0550828 9 0.654663 0.708644 -0.0539813 5.2961e-01 2.6415e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.6580423 3.4676e-01 insignificant 1.0000 1.0000e+00 insignificant -0.0486130 2.8171e-01 insignificant 1.0000e+00 insignificant chr8 28306150 28307150 29608 ZNF395 ENSG00000186918 0.807019 318 7 0.6645351 121 7 0.7787578 106 7 0.747253 119 7 0.86264 84 7 0.839000 260 7 0.7449580 96 7 0.821992 95 7 0.7500884 108 7 0.746601 106 7 0.7904776 189 7 0.7576531 109 7 0.811498 141 7 NA 0 0 0.830087 124 7 0.6005720 65 7 0.725340 76 7 0.781653 149 7 0.748599 124 7 0.809613 331 7 0.874830 54 7 0.817752 99 7 0.8509755 192 7 0.836735 37 4 0.817460 42 4 0.803081 161 7 0.801753 86 7 0.800928 74 7 0.87775 145 7 0.7925596 181 7 0.8110699 109 7 0.824648 315 7 0.761193 139 7 0.7928571 102 7 0.7387755 304 7 0.8462585 112 7 0.8031746 63 7 0.758957 142 7 0.853912 293 7 0.812930 377 7 0.839689 210 7 0.826163 421 7 0.849544 220 7 0.8120455 0.670106 0.7821722 0.751792 0.867478 0.8423615 0.7436475 0.8242264 0.7510014 0.7504366 0.7947130 0.7641628 0.8171103 NA 0.8359874 0.6098209 0.722897 0.7849695 0.7500017 0.8125799 0.881374 0.8272809 0.8534232 0.841756 0.821995 0.810122 0.8074855 0.8061534 0.882359 0.7976320 0.8158517 0.8279056 0.7622811 0.8006403 0.74071914 0.8484775 0.8074452 0.7592788 0.858807 0.818457 0.8460612 0.828823 0.8507574 7 0.7839030 0.824080 -0.04123202 7 0.781736 0.823543 -0.0418066 0.9925878 0.00077796 weaklyHypometh 1 0.25932 insignificant 0.999452 0.00024955 weaklyHypometh 1 0.12478 insignificant -0.05640889 0.0019789 weaklyHypometh 0.98945 insignificant 0.7839030 0.777262 0.0115951 7 0.781736 0.766908 0.01482843 1.1959e-01 9.4178e-02 insignificant 8.9247e-01 1.0000e+00 insignificant 8.4976e-01 1.6835e-02 inconclusive 1.0000e+00 1.0000000 insignificant -0.01414991 5.1733e-01 insignificant 1.0000e+00 insignificant 0.7839030 0.8349770 -5.0120e-02 7 0.781736 0.832285 -5.0549e-02 9.9985e-01 3.6237e-03 weaklyHypometh 1.0000e+00 2.7874e-01 insignificant 9.9999e-01 6.9553e-05 weaklyHypometh 1.0000e+00 1.7388e-02 weaklyHypometh -0.0670614 4.1959e-04 weaklyHypometh 5.2905e-02 weaklyHypometh 0.824080 0.777262 0.0543995 7 0.823543 0.766908 0.0566350 5.1732e-05 1.5555e-01 weaklyHypermeth 7.0865e-04 1.0000e+00 weaklyHypermeth 2.0303e-02 6.1224e-01 weaklyHypermeth 2.4170e-01 1.000000 insignificant 0.0422590 4.6111e-02 weaklyHypermeth 5.6928e-01 insignificant 0.8240803 0.8349770 -0.0091157 7 0.823543 0.832285 -0.00874223 8.4245e-01 2.2996e-01 insignificant 1.0000e+00 1.00000000 insignificant 7.1083e-01 6.6440e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0106525 0.35976222 insignificant 1.00000 insignificant 0.7772622 0.8349770 -0.0569271 7 0.766908 0.832285 -0.0653772 8.3263e-01 4.0861e-03 weaklyHypometh 1.0000000 5.1258e-02 weaklyHypometh 0.8908187 2.0388e-01 insignificant 1.0000 1.0000e+00 insignificant -0.0529114 1.9210e-02 weaklyHypometh 3.0984e-01 insignificant chr8 28314850 28315850 29610 ZNF395 ENSG00000186918 0.025573 563 17 0.0017227 535 20 0.0035546 756 20 0.000000 506 17 0.00000 410 22 0.049887 780 19 0.0042499 620 20 0.021684 627 20 0.0029592 702 20 0.057448 1013 20 0.0033842 719 20 0.0027658 957 20 0.023667 764 20 0.0013699 462 10 0.048902 917 20 0.0046512 775 20 0.025673 428 17 0.052222 585 17 0.023363 451 20 0.075381 753 19 0.000000 385 19 0.003876 369 17 0.0046701 445 20 0.050000 393 20 0.011898 377 17 0.000000 636 20 0.023513 717 21 0.016907 524 22 0.00000 604 20 0.0018147 726 20 0.0012077 524 20 0.084444 903 20 0.041249 495 20 0.0025776 446 20 0.0000000 397 19 0.0000000 264 13 0.0460927 280 21 0.000000 539 20 0.022727 721 17 0.033333 712 19 0.049524 472 17 0.000000 735 17 0.047802 570 17 0.0031192 0.002682 0.0041129 0.000000 0.000000 0.0052982 0.0088518 0.0017187 0.0062236 0.0042392 0.0068954 0.0043955 0.0045962 0.0017933 0.0055345 0.0097046 0.041655 0.0053954 0.0060427 0.0087535 0.000000 0.0078343 0.0084327 0.011786 0.016789 0.000000 0.0078548 0.0034342 0.000000 0.0029676 0.0023394 0.0022458 0.0053521 0.0049724 0.00000000 0.0000000 0.0215992 0.0000000 0.000000 0.000000 0.0018513 0.000000 0.0061769 17 0.0057795 0.005755 0.00060846 20 0.037285 0.018427 0.0188579 0.2331110 0.99797077 insignificant 1 1.00000 insignificant 0.518884 0.99754442 insignificant 1 1.00000 insignificant 0.00489541 0.5970068 insignificant 1.00000 insignificant 0.0057795 0.007435 -0.0004847 20 0.037285 0.040387 -0.00310209 8.9054e-01 7.8783e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3130e-01 9.7341e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.00643637 5.5560e-01 insignificant 1.0000e+00 insignificant 0.0057951 0.0031153 3.0614e-03 17 0.040268 0.056121 -1.5853e-02 7.0988e-01 9.9994e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.2553e-01 9.9995e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0092542 4.0787e-01 insignificant 1.0000e+00 insignificant 0.005755 0.007435 -0.0014007 20 0.018427 0.040387 -0.0219600 9.9962e-01 9.7497e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9985e-01 9.6552e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0015410 8.9814e-01 insignificant 1.0000e+00 insignificant 0.0054695 0.0031153 0.0019635 17 0.013747 0.056121 -0.04237381 9.9353e-01 9.9675e-01 insignificant 1.0000e+00 1.00000000 insignificant 9.9875e-01 9.9945e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0141496 0.25859007 insignificant 1.00000 insignificant 0.0074503 0.0031153 0.0037091 17 0.043618 0.056121 -0.0125032 9.9019e-01 1.0000e+00 insignificant 1.0000000 1.0000e+00 insignificant 0.9997376 1.0000e+00 insignificant 1.0000 1.0000e+00 insignificant -0.0156906 2.5440e-01 insignificant 1.0000e+00 insignificant chr8 28314950 28315950 29611 ZNF395 ENSG00000186918 0.025573 563 17 0.0017227 535 20 0.0035546 756 20 0.000000 506 17 0.00000 410 22 0.049887 780 19 0.0042499 620 20 0.021684 627 20 0.0029592 702 20 0.057448 1013 20 0.0033842 719 20 0.0027658 957 20 0.023667 764 20 0.0013699 462 10 0.048902 917 20 0.0046512 775 20 0.025673 428 17 0.052222 585 17 0.023363 451 20 0.075381 753 19 0.000000 385 19 0.003876 369 17 0.0046701 445 20 0.050000 393 20 0.011898 377 17 0.000000 636 20 0.023513 717 21 0.016907 524 22 0.00000 604 20 0.0018147 726 20 0.0012077 524 20 0.084444 903 20 0.041249 495 20 0.0025776 446 20 0.0000000 397 19 0.0000000 264 13 0.0460927 280 21 0.000000 539 20 0.022727 721 17 0.033333 712 19 0.049524 472 17 0.000000 735 17 0.047802 570 17 0.0031192 0.002682 0.0041129 0.000000 0.000000 0.0052982 0.0088518 0.0017187 0.0062236 0.0042392 0.0068954 0.0043955 0.0045962 0.0017933 0.0055345 0.0097046 0.041655 0.0053954 0.0060427 0.0087535 0.000000 0.0078343 0.0084327 0.011786 0.016789 0.000000 0.0078548 0.0034342 0.000000 0.0029676 0.0023394 0.0022458 0.0053521 0.0049724 0.00000000 0.0000000 0.0215992 0.0000000 0.000000 0.000000 0.0018513 0.000000 0.0061769 17 0.0057795 0.005755 0.00060846 20 0.037285 0.018427 0.0188579 0.2331110 0.99797077 insignificant 1 1.00000 insignificant 0.518884 0.99754442 insignificant 1 1.00000 insignificant 0.00489541 0.5970068 insignificant 1.00000 insignificant 0.0057795 0.007435 -0.0004847 20 0.037285 0.040387 -0.00310209 8.9054e-01 7.8783e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3130e-01 9.7341e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.00643637 5.5560e-01 insignificant 1.0000e+00 insignificant 0.0057951 0.0031153 3.0614e-03 17 0.040268 0.056121 -1.5853e-02 7.0988e-01 9.9994e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.2553e-01 9.9995e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0092542 4.0787e-01 insignificant 1.0000e+00 insignificant 0.005755 0.007435 -0.0014007 20 0.018427 0.040387 -0.0219600 9.9962e-01 9.7497e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9985e-01 9.6552e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0015410 8.9814e-01 insignificant 1.0000e+00 insignificant 0.0054695 0.0031153 0.0019635 17 0.013747 0.056121 -0.04237381 9.9353e-01 9.9675e-01 insignificant 1.0000e+00 1.00000000 insignificant 9.9875e-01 9.9945e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0141496 0.25859007 insignificant 1.00000 insignificant 0.0074503 0.0031153 0.0037091 17 0.043618 0.056121 -0.0125032 9.9019e-01 1.0000e+00 insignificant 1.0000000 1.0000e+00 insignificant 0.9997376 1.0000e+00 insignificant 1.0000 1.0000e+00 insignificant -0.0156906 2.5440e-01 insignificant 1.0000e+00 insignificant chr8 29286450 29287450 29641 DUSP4 ENSG00000120875 0.376525 325 9 0.2565846 355 14 0.2962674 244 12 0.372508 261 10 0.34334 136 11 0.637585 326 12 0.3653354 181 11 0.390285 297 13 0.3160602 266 11 0.509395 180 12 0.4813329 438 14 0.4132972 144 9 0.146035 442 13 0.3000142 118 6 0.332238 361 11 0.2829245 101 9 0.173836 152 7 0.202221 380 8 0.220935 311 12 0.442892 327 12 0.464150 104 8 0.135259 289 11 0.3923473 213 10 0.341823 135 8 0.383422 151 10 0.299845 452 14 0.272842 251 13 0.339486 92 8 0.39729 311 12 0.2467001 604 14 0.1972330 483 14 0.493854 395 12 0.059239 377 14 0.1268424 305 13 0.0067293 502 12 0.0000000 114 6 0.0257331 373 13 0.021463 580 14 0.315995 448 12 0.332733 345 9 0.279700 368 9 0.320069 397 9 0.345215 384 9 0.3379100 0.172396 0.3105591 0.301676 0.361310 0.5314585 0.3005705 0.3652191 0.2336373 0.4633085 0.4689104 0.3538627 0.1389086 0.3592849 0.2911901 0.3347491 0.096277 0.1548011 0.1529419 0.2929017 0.592834 0.1233631 0.4450776 0.264898 0.349948 0.286031 0.2661538 0.2662932 0.403780 0.2318945 0.1951377 0.4001234 0.0098971 0.0179439 0.00576027 0.0034279 0.0102721 0.0029740 0.222317 0.188686 0.2035640 0.154074 0.2079629 8 0.3141734 0.301697 0.00915042 11 0.354955 0.303023 0.0519324 0.0585185 0.91485462 insignificant 1 1.00000 insignificant 0.177504 0.75550964 insignificant 1 1.00000 insignificant 0.01262630 0.7581498 insignificant 1.00000 insignificant 0.3137659 0.016881 0.2986520 12 0.360473 0.034483 0.32599021 2.3782e-37 1.0000e+00 hypermethylated 2.9728e-35 1.0000e+00 hypermethylated 6.1870e-24 1.0000e+00 hypermethylated 2.0623e-21 1.0000000 hypermethylated 0.30297923 6.3448e-09 hypermethylated 6.3448e-07 hypermethylated 0.3142911 0.1865979 1.0410e-01 9 0.377140 0.279703 9.7437e-02 5.8115e-05 9.8635e-01 weaklyHypermeth 2.7674e-03 1.0000e+00 weaklyHypermeth 2.9025e-04 9.8172e-01 weaklyHypermeth 2.0421e-02 1.0000e+00 weaklyHypermeth 0.0242380 4.1042e-01 insignificant 1.0000e+00 insignificant 0.302137 0.016889 0.2850255 13 0.321204 0.036782 0.2844218 4.0752e-32 1.0000e+00 hypermethylated 8.1504e-30 1.0000e+00 hypermethylated 1.4270e-21 1.0000e+00 hypermethylated 4.7566e-19 1.000000 hypermethylated 0.2903529 5.3185e-07 hypermethylated 4.8350e-05 hypermethylated 0.3017291 0.1874356 0.0967801 9 0.312827 0.322073 -0.00924663 1.6845e-02 7.3388e-01 weaklyHypermeth 5.2642e-01 1.00000000 insignificant 4.9245e-02 9.2548e-01 weaklyHypermeth 1.0000e+00 1.000000 insignificant 0.0116117 0.72607763 insignificant 1.00000 insignificant 0.0168889 0.1867905 -0.1809907 9 0.036782 0.298350 -0.2615679 1.0000e+00 3.3825e-26 weaklyHypometh 1.0000000 8.4562e-24 weaklyHypometh 1.0000000 2.1945e-16 weaklyHypometh 1.0000 1.0972e-13 weaklyHypometh -0.2787412 1.9824e-06 hypomethylated 6.6080e-04 hypomethylated chr8 29686450 29687450 29666 DUSP4 ENSG00000120875 0.778088 185 6 0.8479894 157 3 0.7064815 31 3 0.939080 87 5 0.64444 19 2 0.861422 256 6 0.4380952 19 2 0.923333 73 6 0.8873016 20 2 0.857143 23 2 0.9403048 191 6 0.0000000 1 0 0.510823 32 3 0.9833333 16 1 0.857143 16 0 1.0000000 2 0 NA 0 0 0.602679 131 6 0.861518 94 4 0.904368 124 5 1.000000 37 4 1.000000 20 1 0.9733542 57 3 0.950568 54 3 0.852790 130 4 0.883379 161 4 0.709184 45 5 1.000000 5 0 0.96667 43 2 0.8778154 188 6 0.9635741 273 4 0.929094 175 6 0.435888 137 6 0.7142857 113 6 0.7860140 87 4 0.0166667 103 4 0.3103505 116 4 0.354484 278 6 0.829420 134 4 0.716965 98 3 0.879064 178 4 0.905983 32 3 0.411189 208 6 0.8645029 0.753266 0.7339744 0.936118 0.961538 0.8649137 0.5769231 0.8480769 0.8714286 1.0000000 0.9235403 0.7058476 0.9475524 0.9423077 1.0000000 0.9216944 NA 0.6950549 0.9437148 0.8224614 1.000000 1.0000000 0.9427297 0.954545 0.812145 0.822581 0.8008242 0.9761077 0.903846 0.8641654 0.9365562 0.9093119 0.2692308 0.7032967 0.24799047 0.0931812 0.3421856 0.3134366 0.698443 0.539361 0.7834249 0.866864 0.5164835 0 0.8518015 0.897133 -0.04075729 4 0.697263 0.772145 -0.0748825 0.9998413 0.02747027 lowCoverage 1 1.00000 lowCoverage 0.999834 0.22546011 lowCoverage 1 1.00000 lowCoverage -0.16008568 0.0147884 lowCoverage 1.00000 lowCoverage 0.8517007 0.468187 0.3970093 4 0.659420 0.361864 0.29755604 6.1699e-17 1.0000e+00 lowCoverage 2.0566e-15 1.0000e+00 lowCoverage 1.5951e-06 9.9999e-01 lowCoverage 5.5002e-05 1.0000000 lowCoverage 0.32916844 3.4837e-02 lowCoverage 4.9768e-01 lowCoverage 0.8562628 0.6676923 1.9879e-01 4 0.845894 0.640258 2.0564e-01 4.5048e-08 1.0000e+00 lowCoverage 6.1341e-06 1.0000e+00 lowCoverage 4.4790e-03 9.7685e-01 lowCoverage 1.8662e-01 1.0000e+00 lowCoverage 0.0169256 8.7763e-01 lowCoverage 1.0000e+00 lowCoverage 0.897046 0.467626 0.4161589 6 0.772145 0.321657 0.4504878 5.2690e-14 1.0000e+00 hypermethylated 1.8169e-12 1.0000e+00 hypermethylated 5.0149e-07 1.0000e+00 hypermethylated 2.3881e-05 1.000000 hypermethylated 0.4892541 7.3573e-03 lowCoverage 1.3193e-01 lowCoverage 0.8983051 0.6676923 0.2315337 4 0.908218 0.640258 0.26795955 5.0450e-10 1.0000e+00 lowCoverage 8.4083e-08 1.00000000 lowCoverage 2.5238e-04 9.9927e-01 lowCoverage 1.6825e-02 1.000000 lowCoverage 0.1770112 0.12215788 lowCoverage 1.00000 lowCoverage 0.4693141 0.6676923 -0.1834518 4 0.482486 0.640258 -0.1577722 9.0273e-01 5.0550e-03 lowCoverage 1.0000000 6.1466e-02 lowCoverage 0.8348316 1.9018e-03 lowCoverage 1.0000 4.2987e-02 lowCoverage -0.3122429 6.2233e-02 lowCoverage 6.9148e-01 lowCoverage chr8 30089850 30090850 29692 LEPROTL1 ENSG00000104660 0.954811 284 9 0.8918946 319 10 0.7515552 156 9 0.826968 161 6 0.89915 50 5 0.814610 294 9 0.9300272 57 3 0.878435 153 8 0.8904592 86 6 0.991582 110 3 0.9422708 329 8 0.8541667 35 3 0.909296 160 6 1.0000000 8 0 0.898912 124 6 0.8261294 31 3 0.516667 19 2 0.875714 90 5 0.978509 132 5 0.955628 285 9 0.852653 79 4 0.945960 48 3 0.8884926 185 9 0.954018 47 3 0.952731 66 5 0.836752 292 8 0.839344 78 6 0.927885 40 3 0.96074 149 5 0.9270364 306 10 0.9271915 343 7 0.900853 384 9 0.122578 353 10 0.0284068 169 5 0.2023810 289 8 0.2625483 206 5 0.1809305 118 8 0.139889 408 10 0.967486 214 6 0.949014 227 6 0.946248 206 5 0.957361 111 3 0.833451 153 5 0.9080212 0.889384 0.6772749 0.937885 0.886297 0.8958440 0.8047610 0.8464074 0.8517874 0.9786560 0.9391753 0.6288986 0.9047373 0.8752018 0.8875311 0.7001759 0.643688 0.8774357 0.9494203 0.9189978 0.776010 0.9021168 0.8631574 0.898496 0.910708 0.906083 0.8114629 0.9561404 0.909811 0.9335797 0.9519036 0.8835900 0.1679088 0.0555709 0.02401838 0.1305527 0.1720246 0.1793856 0.954643 0.946502 0.8734608 0.893162 0.8788478 3 0.8886576 0.911210 -0.02196436 8 0.891278 0.923947 -0.0326695 0.9321069 0.07327467 insignificant 1 1.00000 insignificant 0.824524 0.26661097 insignificant 1 1.00000 insignificant -0.03013251 0.2770381 insignificant 1.00000 insignificant 0.8886576 0.153597 0.7425831 8 0.891278 0.154610 0.73666747 1.0601e-83 1.0000e+00 hypermethylated 3.5336e-81 1.0000e+00 hypermethylated 5.5893e-23 1.0000e+00 hypermethylated 1.3973e-20 1.0000000 hypermethylated 0.72321680 1.8191e-09 hypermethylated 2.0213e-07 hypermethylated 0.8886576 0.9176729 -3.0074e-02 5 0.891278 0.943877 -5.2600e-02 9.8354e-01 3.6283e-02 weaklyHypometh 1.0000e+00 8.8495e-01 insignificant 9.8398e-01 5.3593e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0513732 1.5787e-01 insignificant 1.0000e+00 insignificant 0.911210 0.153597 0.7642456 9 0.923947 0.154610 0.7693370 1.0965e-68 1.0000e+00 hypermethylated 3.6550e-66 1.0000e+00 hypermethylated 1.3986e-20 1.0000e+00 hypermethylated 3.4965e-18 1.000000 hypermethylated 0.7533493 2.0682e-07 hypermethylated 2.2574e-05 hypermethylated 0.9112103 0.9176729 -0.0068526 5 0.923947 0.943877 -0.01993012 9.5038e-01 3.3768e-01 insignificant 1.0000e+00 1.00000000 insignificant 9.7673e-01 1.1422e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0212407 0.47317256 insignificant 1.00000 insignificant 0.1535969 0.9176729 -0.7649735 5 0.154610 0.943877 -0.7892671 1.0000e+00 2.4886e-39 hypomethylated 1.0000000 1.2443e-36 hypomethylated 1.0000000 5.1773e-13 hypomethylated 1.0000 1.7258e-10 hypomethylated -0.7745900 2.0014e-08 hypomethylated 2.0014e-05 hypomethylated chr8 30341350 30342350 29703 ENSG00000210525 0.600397 87 8 0.3341880 78 6 0.5074074 25 1 0.453704 64 3 0.60980 66 8 0.550463 91 6 0.4305879 65 4 0.666151 94 6 0.4787879 42 2 0.584821 32 2 0.4668268 140 7 0.3888889 15 0 0.639506 86 8 0.6302309 69 8 0.639815 44 6 0.5000000 29 2 0.666667 6 0 0.529368 94 8 0.500000 32 2 0.487500 72 6 0.375000 14 0 0.500000 13 0 0.7815789 58 4 0.452381 16 0 0.588010 63 6 0.374539 100 7 0.600000 20 1 0.666667 13 0 0.47648 113 8 0.5103175 79 6 0.5117063 69 6 0.392593 76 8 0.515111 113 8 0.5280612 45 6 0.4950337 83 9 0.5000000 6 0 0.5062500 58 7 0.474167 121 6 0.445744 57 2 0.624066 97 6 0.499199 83 6 0.840909 34 4 0.374445 75 6 0.5962544 0.475047 0.5691057 0.585366 0.645146 0.6290650 0.5755159 0.6698595 0.5241685 0.6280488 0.5758145 0.3658537 0.5721545 0.6324042 0.6361789 NA 0.659375 0.5310529 0.6219512 0.6008130 0.487013 0.5487805 0.6125836 0.567766 0.640679 0.524045 0.5853659 0.7560976 0.606199 0.6062718 0.6269841 0.5284553 0.5248376 0.5391986 0.55986696 0.5959350 0.5142276 0.5908537 0.599059 0.607350 0.5748906 0.685211 0.5675939 0 0.5645816 0.561514 0.00364354 6 0.532601 0.495538 0.0370631 0.6630795 0.82132945 insignificant 1 1.00000 insignificant 0.601670 0.86274899 insignificant 1 1.00000 insignificant 0.01414992 0.7359542 lowCoverage 1.00000 lowCoverage 0.5645816 0.514085 0.0341906 8 0.532601 0.520374 0.01222776 2.1061e-01 9.5310e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.5188e-01 9.7966e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.03015192 1.9298e-01 lowCoverage 1.0000e+00 lowCoverage 0.5645816 0.6069364 -3.2073e-03 6 0.532601 0.466857 6.5745e-02 4.3596e-01 8.4257e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.9571e-01 8.5379e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0236169 7.9235e-01 lowCoverage 1.0000e+00 lowCoverage 0.561514 0.514085 0.0309824 6 0.495538 0.520374 -0.0248354 2.0300e-01 7.4633e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.5943e-01 8.5673e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0160020 6.6711e-01 lowCoverage 1.0000e+00 lowCoverage 0.5615142 0.6069364 -0.0041435 6 0.495538 0.466857 0.02868145 7.5390e-01 8.3812e-01 insignificant 1.0000e+00 1.00000000 insignificant 8.2675e-01 8.7290e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0377668 0.68806211 lowCoverage 1.00000 lowCoverage 0.5140845 0.6069364 -0.0445199 6 0.520374 0.466857 0.0535168 3.5197e-01 3.6958e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.7908628 3.4082e-01 insignificant 1.0000 1.0000e+00 insignificant -0.0537688 5.4837e-01 lowCoverage 1.0000e+00 lowCoverage chr8 32531750 32532750 29736 NRG1 ENSG00000157168 0.708701 254 7 0.8135399 122 7 0.8050654 89 4 0.763285 131 7 0.75308 73 6 0.841814 292 7 0.7854612 127 7 0.811370 78 6 0.6691087 88 6 0.795041 121 7 0.7616923 213 7 0.7250000 63 7 0.804405 136 7 0.6666667 24 2 0.846135 117 7 0.9448864 84 7 0.726164 79 6 0.746206 174 7 0.749443 138 5 0.810054 250 7 0.836673 72 5 0.792290 74 7 0.8816313 160 7 0.714355 76 5 0.895351 65 7 0.837393 193 7 0.646140 87 5 0.767857 51 5 0.79760 123 7 0.6871932 185 7 0.7486790 101 5 0.767582 312 7 0.745804 120 6 0.7071630 99 7 0.7526740 197 7 0.6207689 69 6 0.7419400 117 5 0.758674 167 7 0.838792 257 7 0.854762 233 7 0.801899 176 7 0.832838 273 7 0.833760 212 7 0.8330597 0.836239 0.7863153 0.772466 0.754217 0.8269551 0.7836598 0.7859658 0.7090268 0.8094410 0.8206020 0.8660819 0.8287026 0.7729747 0.8578226 0.9486443 0.761127 0.7653883 0.7405997 0.8092252 0.814215 0.8055138 0.8915389 0.684384 0.894584 0.824983 0.7143098 0.7236842 0.801101 0.8079977 0.8356640 0.8143663 0.7231216 0.7120304 0.75810210 0.6004171 0.7854846 0.7596148 0.841892 0.865684 0.8087914 0.848406 0.8388038 5 0.7990954 0.806538 -0.01191165 7 0.786524 0.738133 0.0483915 0.3108731 0.16266234 insignificant 1 1.00000 insignificant 0.244675 0.15608580 insignificant 1 1.00000 insignificant -0.00470580 0.8589173 insignificant 1.00000 insignificant 0.7990954 0.738622 0.0547518 7 0.786524 0.726249 0.06027494 5.6349e-03 9.8901e-01 weaklyHypermeth 5.6349e-02 1.0000e+00 weaklyHypermeth 4.7770e-03 9.7636e-01 weaklyHypermeth 7.4641e-02 1.0000000 weaklyHypermeth 0.05518526 5.7985e-02 insignificant 7.2481e-01 insignificant 0.7990159 0.8505647 -4.3725e-02 7 0.782002 0.832796 -5.0794e-02 9.9732e-01 2.4077e-02 weaklyHypometh 1.0000e+00 7.6819e-01 insignificant 9.8974e-01 5.7370e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0560542 3.0023e-03 weaklyHypometh 1.6680e-01 insignificant 0.806538 0.738622 0.0666019 7 0.738133 0.726249 0.0118835 1.7710e-03 9.5779e-01 weaklyHypermeth 1.9250e-02 1.0000e+00 weaklyHypermeth 4.9391e-03 9.3889e-01 weaklyHypermeth 6.9565e-02 1.000000 weaklyHypermeth 0.0598911 7.0090e-02 insignificant 7.7877e-01 insignificant 0.8080268 0.8505647 -0.0305353 7 0.807866 0.832796 -0.02492951 8.9256e-01 1.2534e-01 insignificant 1.0000e+00 1.00000000 insignificant 7.5772e-01 1.4189e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0513484 0.04609215 weaklyHypometh 0.96025 insignificant 0.7389034 0.8505647 -0.0978934 7 0.734761 0.832796 -0.0980344 1.0000e+00 1.1126e-05 weaklyHypometh 1.0000000 2.8528e-04 weaklyHypometh 0.9999989 1.4030e-05 weaklyHypometh 1.0000 1.0021e-03 weaklyHypometh -0.1112395 2.3097e-03 weaklyHypometh 6.8025e-02 weaklyHypometh chr8 34833950 34834950 29789 ENSG00000215264 0.800733 312 9 0.7704332 174 9 0.7145290 158 9 0.721971 176 9 0.66241 50 6 0.773541 294 9 0.7579365 51 6 0.809809 69 6 0.7682823 52 6 0.777778 40 2 0.7002492 182 6 0.6555556 22 2 0.886574 68 6 0.8051948 50 6 0.748872 78 6 0.6388889 21 2 1.000000 6 0 0.791635 183 9 0.680903 119 6 0.802050 225 9 0.916667 18 0 0.733333 34 6 0.7899560 139 8 0.791997 44 6 0.708333 37 4 0.783323 236 9 0.743181 46 2 0.738095 24 2 0.81034 96 6 0.7932268 237 9 0.7906526 222 9 0.716544 322 9 0.716441 208 9 0.6351852 74 6 0.7951964 261 9 NA 0 0 0.7574830 59 6 0.632251 239 9 0.830143 224 9 0.807448 245 8 0.795899 246 9 0.901349 197 8 0.868589 201 9 0.8228252 0.758861 0.6583047 0.850726 0.648304 0.8003209 0.7628407 0.8256203 0.7350573 0.8301887 0.8394680 0.6949686 0.8560010 0.8024994 0.8816286 0.5990566 0.863823 0.8240229 0.8334644 0.8245242 0.929245 0.7295597 0.7492138 0.777534 0.714623 0.802799 0.8433028 0.8349057 0.813657 0.7870761 0.8113837 0.7759758 0.7078212 0.6284067 0.73235403 NA 0.7092318 0.7705797 0.822593 0.814765 0.8155827 0.867555 0.8950949 0 0.7883871 0.792440 -0.00797713 8 0.770437 0.672089 0.0983486 0.6010446 0.45923412 insignificant 1 1.00000 insignificant 0.813291 0.09971261 insignificant 1 1.00000 insignificant -0.01293648 0.6034898 insignificant 1.00000 insignificant 0.7883212 0.703924 0.0757057 8 0.752256 0.742741 0.00951468 2.4310e-03 9.7372e-01 weaklyHypermeth 2.5862e-02 1.0000e+00 weaklyHypermeth 1.0588e-02 9.9600e-01 weaklyHypermeth 1.4706e-01 1.0000000 insignificant 0.05605616 1.7901e-01 insignificant 1.0000e+00 insignificant 0.7883212 0.8400719 -5.2347e-02 8 0.752256 0.864768 -1.1251e-01 9.9981e-01 6.9779e-03 weaklyHypometh 1.0000e+00 4.2415e-01 insignificant 9.9967e-01 1.2237e-02 weaklyHypometh 1.0000e+00 7.6482e-01 insignificant -0.0773181 1.3969e-02 weaklyHypometh 4.3652e-01 insignificant 0.793531 0.703571 0.0884456 9 0.739298 0.717015 0.0222827 7.0081e-04 9.9390e-01 weaklyHypermeth 8.6520e-03 1.0000e+00 weaklyHypermeth 5.0973e-03 9.9619e-01 weaklyHypermeth 7.0795e-02 1.000000 weaklyHypermeth 0.0689926 1.0555e-01 insignificant 1.0000e+00 insignificant 0.7935306 0.8399281 -0.0457231 8 0.739298 0.851245 -0.11194726 9.9723e-01 1.9255e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant 9.5555e-01 1.2059e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0643816 0.03034348 weaklyHypometh 0.69022 insignificant 0.7039239 0.8400719 -0.1374791 8 0.742741 0.864768 -0.1220273 1.0000e+00 1.2395e-06 weaklyHypometh 1.0000000 3.7561e-05 weaklyHypometh 1.0000000 4.6807e-06 weaklyHypometh 1.0000 4.6807e-04 weaklyHypometh -0.1333742 1.0907e-02 weaklyHypometh 2.0975e-01 insignificant chr8 37679350 37680350 29850 ZNF703 ENSG00000183779 0.730033 143 5 0.7161034 241 6 0.5727024 136 6 0.578855 98 5 0.51771 68 5 0.658899 219 6 0.7726238 120 6 0.656469 125 6 0.7103171 97 5 0.773148 55 4 0.7836216 203 6 0.7522727 74 5 0.449420 127 5 0.7961957 53 2 0.551894 100 5 0.8980186 63 3 0.578869 39 3 0.578519 107 5 0.555997 165 5 0.528330 190 6 0.746666 66 5 0.245543 46 3 0.7410000 137 6 0.797619 31 4 0.346212 45 3 0.509752 201 6 0.567499 111 5 0.858784 57 5 0.83200 106 4 0.4489899 298 6 0.3944481 219 6 0.845691 235 6 0.404850 146 6 0.4465861 93 5 0.5775862 214 4 0.4000000 28 3 0.6453200 130 6 0.406728 177 6 0.105616 159 5 0.343600 143 5 0.327056 119 5 0.231119 119 4 0.255300 122 5 0.6815897 0.689241 0.5360482 0.712629 0.693894 0.7636657 0.7428917 0.6959247 0.6870414 0.7714793 0.8131631 0.7052854 0.5164966 0.6640927 0.5710624 0.8462148 0.609667 0.4781279 0.6619674 0.5970281 0.670935 0.3209545 0.6724942 0.820667 0.353198 0.535848 0.7122678 0.8154856 0.766686 0.5034443 0.4859228 0.8428258 0.3569291 0.3405545 0.37329074 0.2674419 0.6381604 0.3692398 0.161827 0.333759 0.3672267 0.203174 0.2872207 4 0.6736886 0.627982 0.04945092 6 0.567085 0.547336 0.0197497 0.2127257 0.99489258 insignificant 1 1.00000 insignificant 0.560454 0.98914547 insignificant 1 1.00000 insignificant 0.04681584 0.5040032 lowCoverage 1.00000 lowCoverage 0.6743897 0.472081 0.2593277 5 0.672780 0.457605 0.21517522 6.3393e-13 3.6051e-01 hypermethylated 1.6255e-11 1.0000e+00 hypermethylated 6.1411e-05 5.6595e-01 hypermethylated 1.3919e-03 1.0000000 hypermethylated 0.17782153 6.2956e-03 lowCoverage 1.2344e-01 lowCoverage 0.6736886 0.2356495 4.0202e-01 5 0.567085 0.200676 3.6641e-01 4.9118e-20 1.0000e+00 hypermethylated 1.3938e-17 1.0000e+00 hypermethylated 3.8740e-10 1.0000e+00 hypermethylated 1.7480e-07 1.0000e+00 hypermethylated 0.4054617 5.6841e-05 lowCoverage 1.1368e-02 lowCoverage 0.628313 0.472081 0.2006766 5 0.618670 0.457605 0.1610645 1.8353e-06 2.2674e-01 hypermethylated 3.2198e-05 1.0000e+00 hypermethylated 1.6938e-03 4.7279e-01 weaklyHypermeth 2.9204e-02 1.000000 weaklyHypermeth 0.1310057 1.0520e-01 lowCoverage 1.0000e+00 lowCoverage 0.6279819 0.2356495 0.3479173 5 0.547336 0.200676 0.34665911 1.1288e-10 1.0000e+00 hypermethylated 2.2576e-08 1.00000000 hypermethylated 5.4833e-07 1.0000e+00 hypermethylated 1.3708e-04 1.000000 hypermethylated 0.3586458 0.00027975 lowCoverage 0.13613 lowCoverage 0.4720812 0.2367223 0.1778867 5 0.457605 0.267569 0.1900365 3.3671e-05 7.9235e-01 weaklyHypermeth 0.0067343 1.0000e+00 weaklyHypermeth 0.0166128 7.1663e-01 weaklyHypermeth 1.0000 1.0000e+00 insignificant 0.2276402 4.4750e-03 lowCoverage 1.0655e-01 lowCoverage chr8 37762950 37763950 29856 PROSC ENSG00000147471 0.699884 241 5 0.6975730 151 5 0.5750114 127 5 0.737714 176 5 0.71899 105 5 0.780686 256 5 0.6677778 109 3 0.719946 128 5 0.7081828 104 5 0.464864 82 3 0.7212365 221 5 0.5643725 63 5 0.710093 164 5 0.6367521 76 5 0.732021 109 5 0.5328947 57 3 0.666667 42 2 0.522103 168 5 0.765556 98 5 0.681009 185 5 0.661741 64 3 0.638889 56 5 0.6663169 126 5 0.793939 83 5 0.618181 68 5 0.709647 205 5 0.492560 78 5 0.662222 72 3 0.68005 126 5 0.7131078 192 5 0.7207474 167 5 0.585902 284 5 0.539976 144 5 0.5700000 90 5 0.5070813 93 5 0.6636364 27 2 0.5270007 133 5 0.797114 182 5 0.656517 183 5 0.676113 179 5 0.732023 167 5 0.757982 143 5 0.744016 171 5 0.6522650 0.642993 0.6102865 0.708784 0.688613 0.6733471 0.6221997 0.6861368 0.6762225 0.6593740 0.6538675 0.6014686 0.6487747 0.6929479 0.6613298 0.5348258 0.651822 0.6827830 0.7211876 0.6819934 0.658663 0.6332659 0.6273166 0.724144 0.578597 0.679282 0.5670908 0.6104184 0.675295 0.6839195 0.6816165 0.6685982 0.5243541 0.5398785 0.58935676 0.5912771 0.5044238 0.6876320 0.656451 0.651298 0.6512480 0.647022 0.6254816 3 0.6750563 0.697567 0.00654515 5 0.560077 0.581319 -0.0212427 0.6399283 0.67888236 insignificant 1 1.00000 insignificant 0.564506 0.86365715 insignificant 1 1.00000 insignificant 0.00322475 0.9133403 lowCoverage 1.00000 lowCoverage 0.6750563 0.621824 0.0900918 5 0.560077 0.568880 -0.00880335 4.7529e-05 9.6685e-01 weaklyHypermeth 6.0163e-04 1.0000e+00 weaklyHypermeth 1.1062e-02 9.5543e-01 weaklyHypermeth 1.4750e-01 1.0000000 insignificant 0.06436528 2.3292e-01 lowCoverage 1.0000e+00 lowCoverage 0.6750563 0.6120996 2.0162e-02 5 0.560077 0.768192 -2.0812e-01 4.3286e-01 8.1218e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.4200e-01 4.6207e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0481637 1.0803e-01 lowCoverage 1.0000e+00 lowCoverage 0.697567 0.621824 0.0819106 5 0.581319 0.568880 0.0124393 6.1089e-04 9.8475e-01 weaklyHypermeth 7.6362e-03 1.0000e+00 weaklyHypermeth 8.5950e-02 9.8069e-01 insignificant 8.2644e-01 1.000000 insignificant 0.0611405 2.6080e-01 lowCoverage 1.0000e+00 lowCoverage 0.6975674 0.6120996 0.0085009 5 0.581319 0.768192 -0.18687252 4.0147e-01 6.6919e-01 insignificant 1.0000e+00 1.00000000 insignificant 8.7429e-01 3.7496e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0513884 0.10597108 lowCoverage 1.00000 lowCoverage 0.6218236 0.6120996 -0.0688965 5 0.568880 0.768192 -0.1993119 9.9902e-01 1.3384e-02 weaklyHypometh 1.0000000 1.4088e-01 insignificant 0.9999883 4.0008e-02 weaklyHypometh 1.0000 5.1293e-01 insignificant -0.1125290 5.7895e-02 lowCoverage 6.5790e-01 lowCoverage chr8 37797950 37798950 29857 GPR124 ENSG00000020181 0.257124 113 3 0.2232816 163 6 0.2497930 185 6 0.350340 131 4 0.17235 102 5 0.401629 194 6 0.2825634 116 6 0.329900 187 6 0.2287553 178 6 0.261623 178 6 0.3058079 173 5 0.3299868 81 5 0.138761 179 6 0.4231563 113 4 0.218484 220 6 0.3015873 79 5 0.152718 42 5 0.110532 153 4 0.225390 141 6 0.265628 180 5 0.228604 87 5 0.151282 98 4 0.4659251 101 4 0.490939 89 4 0.396158 59 4 0.193487 179 4 0.159529 146 5 0.199513 101 6 0.37409 107 4 0.1683316 202 4 0.2492587 149 4 0.310462 159 6 0.033333 192 6 0.0000000 68 5 0.3333333 10 1 0.0277778 16 1 0.0596324 167 6 0.041667 134 4 0.195681 115 3 0.159306 105 4 0.212472 89 3 0.241310 79 3 0.203968 102 3 0.3314463 0.272791 0.2254037 0.302121 0.199634 0.4266194 0.2511680 0.3226119 0.2796941 0.3125197 0.3932183 0.2588155 0.2246837 0.3980031 0.2198267 0.2891738 0.252118 0.1754015 0.2403182 0.2811962 0.333304 0.2138807 0.4109106 0.494254 0.336883 0.294396 0.2306414 0.1621989 0.353203 0.2696767 0.2161784 0.3065526 0.0256410 0.0000000 0.06145299 0.0559117 0.0508547 0.0320513 0.242590 0.208911 0.2514351 0.260109 0.2620574 3 0.2816369 0.299116 -0.00532264 5 0.269499 0.273786 -0.0042864 0.4274786 0.07262466 insignificant 1 1.00000 insignificant 0.698573 0.60923662 insignificant 1 1.00000 insignificant -0.02082799 0.6071184 lowCoverage 1.00000 lowCoverage 0.2816369 0.037607 0.2452816 5 0.269499 0.041539 0.22796017 4.8785e-12 9.8863e-01 hypermethylated 1.1088e-10 1.0000e+00 hypermethylated 4.1731e-05 9.9996e-01 hypermethylated 1.0178e-03 1.0000000 hypermethylated 0.17884660 1.4786e-02 lowCoverage 2.3469e-01 lowCoverage 0.2816369 0.3102041 3.8940e-02 3 0.269499 0.165309 1.0419e-01 8.6575e-03 9.9473e-01 lowCoverage 2.8858e-01 1.0000e+00 lowCoverage 2.3248e-02 9.9638e-01 lowCoverage 7.7493e-01 1.0000e+00 lowCoverage 0.0589229 1.7988e-02 lowCoverage 5.4509e-01 lowCoverage 0.298578 0.037479 0.2577732 4 0.240722 0.032308 0.2084140 2.4959e-09 9.9981e-01 lowCoverage 5.9427e-08 1.0000e+00 lowCoverage 1.1986e-03 1.0000e+00 lowCoverage 2.1794e-02 1.000000 lowCoverage 0.1996746 9.0768e-03 lowCoverage 1.4880e-01 lowCoverage 0.2991162 0.3102041 0.0416998 3 0.273786 0.165309 0.10847723 1.8702e-02 9.9579e-01 lowCoverage 5.6674e-01 1.00000000 lowCoverage 7.5713e-02 9.9896e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 0.0797509 0.05281720 lowCoverage 1.00000 lowCoverage 0.0376068 0.3102041 -0.2442103 3 0.041539 0.165309 -0.1237694 9.7008e-01 3.4506e-05 lowCoverage 1.0000000 7.6680e-04 lowCoverage 0.9921375 5.1944e-02 lowCoverage 1.0000 6.2583e-01 lowCoverage -0.1199237 6.4838e-02 lowCoverage 7.0476e-01 lowCoverage chr8 37811650 37812650 29858 GPR124 ENSG00000020181 0.754152 171 5 0.8045068 101 5 0.8302144 78 6 0.765502 255 6 0.75794 44 5 0.848818 147 7 0.7832114 97 6 0.887952 105 5 0.7996748 96 5 0.720010 72 6 0.8095758 105 6 0.9491342 65 5 0.788168 123 5 0.9571429 37 3 0.892316 85 5 0.7733333 27 2 0.933333 24 3 0.861251 195 5 0.773016 73 6 0.725693 113 7 0.790649 77 4 0.714646 174 6 0.7283859 68 6 0.805147 49 3 0.748136 186 6 0.823322 107 6 0.808442 37 3 0.579167 39 3 0.75423 106 6 0.8470588 65 5 0.7333815 127 6 0.838262 191 6 0.613095 73 3 0.6668283 96 6 1.0000000 45 2 0.9548265 113 6 0.6891695 80 6 0.827922 93 6 0.876702 235 6 0.889260 166 6 0.728216 189 6 0.812917 182 6 0.726110 224 6 0.9241177 0.792217 0.8095212 0.860461 0.910764 0.8543080 0.8446119 0.9046167 0.8433937 0.7524873 0.9310814 0.9231737 0.8442016 0.9075000 0.8533888 0.8337183 0.933510 0.8104408 0.8659722 0.8545395 0.928516 0.8054752 0.9044805 0.889844 0.939070 0.810137 0.9345644 0.8737500 0.843946 0.9042647 0.7934464 0.9169265 0.5058036 0.4933319 0.75739441 0.9687656 0.6144300 0.7944399 0.820290 0.855086 0.7582792 0.858003 0.7878457 3 0.8538041 0.845714 -0.00264568 6 0.824433 0.772399 0.0520338 0.4978178 0.80767923 insignificant 1 1.00000 insignificant 0.592208 0.68319741 insignificant 1 1.00000 insignificant 0.05651174 0.0448885 weaklyHypermeth 1.00000 insignificant 0.8534267 0.722000 0.1497175 6 0.798080 0.728623 0.06945700 7.6622e-06 3.1912e-01 weaklyHypermeth 1.1436e-04 1.0000e+00 weaklyHypermeth 2.5761e-01 4.8225e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.02877341 6.8619e-01 lowCoverage 1.0000e+00 lowCoverage 0.8538041 0.8212851 4.2628e-02 6 0.824433 0.841892 -1.7459e-02 5.8032e-02 7.0698e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.0401e-01 9.4310e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0141063 7.2676e-01 insignificant 1.0000e+00 insignificant 0.846596 0.722000 0.1247826 6 0.778799 0.728623 0.0501755 7.6303e-04 1.4144e-01 weaklyHypermeth 9.3053e-03 1.0000e+00 weaklyHypermeth 2.8237e-01 5.0972e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0277383 7.0145e-01 lowCoverage 1.0000e+00 lowCoverage 0.8457143 0.8212851 0.0454852 6 0.772399 0.841892 -0.06949325 1.5416e-01 4.9371e-01 insignificant 1.0000e+00 1.00000000 insignificant 1.6770e-01 9.0360e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0424055 0.33338972 insignificant 1.00000 insignificant 0.7220000 0.8209256 -0.1028206 6 0.728623 0.796719 -0.0680954 4.2179e-01 1.4027e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.3908987 7.4508e-01 insignificant 1.0000 1.0000e+00 insignificant -0.0146672 8.4891e-01 lowCoverage 1.0000e+00 lowCoverage chr8 37864650 37865650 29866 BRF2 ENSG00000104221 0.615608 80 6 0.4089286 55 6 0.2666667 13 1 0.639444 42 1 0.72222 47 4 0.545174 54 6 0.4111111 32 4 0.500505 39 6 0.5443122 49 6 0.619048 30 2 0.4962963 37 4 0.5125000 17 1 0.573894 126 6 0.6662698 54 6 0.600529 45 6 0.5763889 34 4 0.281433 57 3 0.578381 108 6 0.555556 20 1 0.613889 31 3 0.450000 10 1 0.500000 4 0 0.6137566 64 6 0.467262 33 3 0.611111 32 1 0.572421 63 6 0.714286 27 3 0.491667 21 3 0.55952 47 6 0.5348485 57 3 0.6000000 24 3 0.400000 26 3 0.528139 63 4 0.4907407 34 1 0.4833333 56 6 0.4000000 7 0 0.5833333 35 3 0.394444 29 3 0.705128 42 1 0.603704 70 4 0.665608 64 4 0.580087 64 6 0.730159 32 3 0.6447146 0.431231 0.3723404 0.717730 0.692671 0.5952895 0.4836879 0.5261122 0.5484211 0.6451368 0.5777778 0.6304390 0.6140265 0.7320162 0.6644715 0.6471631 0.536805 0.6237296 0.6808511 0.6524823 0.608764 0.6938703 0.6789936 0.518997 0.624113 0.599417 0.6767317 0.5702128 0.525836 0.6421663 0.5764277 0.4680851 0.5747444 0.5756501 0.56117021 0.5227288 0.6276596 0.4645390 0.699264 0.609929 0.6899696 0.678641 0.7152989 0 0.5948454 0.600490 0.02912331 3 0.571798 0.532803 0.0389951 0.0956760 0.89225812 lowCoverage 1 1.00000 lowCoverage 0.188956 0.73819523 lowCoverage 1 1.00000 lowCoverage -0.00649837 0.8593541 lowCoverage 1.00000 lowCoverage 0.5948454 0.540179 0.0597851 5 0.571798 0.497317 0.07448065 4.8530e-02 9.9374e-01 weaklyHypermeth 3.9455e-01 1.0000e+00 insignificant 2.1891e-01 9.7912e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.05640947 1.7946e-01 lowCoverage 1.0000e+00 lowCoverage 0.5948454 0.6397059 -3.3310e-02 4 0.571798 0.610191 -3.8393e-02 8.0734e-01 2.9977e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.5566e-01 4.6197e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.1205293 9.4833e-03 lowCoverage 3.6642e-01 lowCoverage 0.600490 0.540179 0.0330580 2 0.532803 0.497317 0.0354855 3.3622e-01 8.8778e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 3.6525e-01 8.8706e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 0.0629078 1.3317e-01 lowCoverage 1.0000e+00 lowCoverage 0.6004902 0.6397059 -0.0579442 1 0.532803 0.610191 -0.07738849 8.3409e-01 1.4897e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 9.4121e-01 1.1037e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage -0.1140309 0.01317972 lowCoverage 0.43932 lowCoverage 0.5401786 0.6397059 -0.0866942 4 0.497317 0.610191 -0.1128740 9.7708e-01 7.1136e-02 lowCoverage 1.0000000 6.0285e-01 lowCoverage 0.9951970 2.0774e-02 lowCoverage 1.0000 3.0108e-01 lowCoverage -0.1769387 2.1142e-03 lowCoverage 6.8025e-02 lowCoverage chr8 38254050 38255050 29886 PPAPDC1B ENSG00000147535 0.822841 144 6 0.6579365 105 6 0.6626984 30 3 0.668809 111 4 0.86111 65 6 0.739103 50 4 0.7853350 58 3 0.710526 81 6 0.8809524 30 3 0.767593 53 6 0.7262821 112 6 0.8666667 15 3 0.831667 86 3 0.8015152 46 6 0.769994 48 3 0.5833333 13 0 1.000000 9 0 0.870238 167 4 0.833333 42 6 0.816667 60 6 0.666667 12 0 0.916667 12 0 0.6843434 77 3 0.775000 17 2 0.722222 72 6 0.742857 58 3 0.766667 21 3 0.633333 21 3 0.80868 85 6 0.7833333 44 6 0.7861722 52 3 0.791667 40 6 0.656623 131 6 0.5500000 57 3 0.7399267 66 6 0.9166667 9 0 0.3369048 58 3 0.801515 55 6 0.786494 89 3 0.820370 110 6 0.763218 117 6 0.753714 107 3 0.834369 90 6 0.7926713 0.644147 0.7023810 0.724146 0.844345 0.7418269 0.7877349 0.6953125 0.9226190 0.8194444 0.6988248 0.8290594 0.7987500 0.8020833 0.7563912 0.6631944 1.000000 0.8173032 0.8065476 0.8041667 0.562500 0.8854167 0.7113321 0.698958 0.718750 0.685764 0.8458333 0.6187500 0.811613 0.7437500 0.7730082 0.7505208 0.6776580 0.5638889 0.78250916 0.8854167 0.4633681 0.7885417 0.734164 0.819522 0.7732040 0.779003 0.8282867 0 0.7664399 0.758824 0.00893073 6 0.764659 0.759828 0.0048305 0.3263909 0.59129933 insignificant 1 1.00000 insignificant 0.133911 0.58062255 insignificant 1 1.00000 insignificant 0.02636248 0.3964917 lowCoverage 1.00000 lowCoverage 0.7667925 0.672973 0.0948986 6 0.798279 0.573108 0.22517140 3.7814e-03 9.9996e-01 weaklyHypermeth 3.9390e-02 1.0000e+00 weaklyHypermeth 3.2349e-02 9.9852e-01 weaklyHypermeth 3.6347e-01 1.0000000 insignificant 0.11589064 2.2964e-01 lowCoverage 1.0000e+00 lowCoverage 0.7664399 0.7953216 -2.5566e-02 6 0.764659 0.792474 -2.7816e-02 8.9811e-01 2.1411e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.0316e-01 4.9955e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0088030 7.4603e-01 lowCoverage 1.0000e+00 lowCoverage 0.759295 0.676550 0.0853423 6 0.794139 0.715965 0.0781738 3.6049e-02 9.9943e-01 weaklyHypermeth 3.1077e-01 1.0000e+00 insignificant 2.0555e-01 9.5688e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0895282 3.4072e-01 lowCoverage 1.0000e+00 lowCoverage 0.7588235 0.7953216 -0.0375214 6 0.759828 0.792474 -0.03264610 9.3397e-01 2.5601e-01 insignificant 1.0000e+00 1.00000000 insignificant 7.9546e-01 3.3416e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0351655 0.20789291 lowCoverage 1.00000 lowCoverage 0.6747967 0.7953216 -0.1176267 6 0.668626 0.792474 -0.1238489 9.9983e-01 5.3723e-03 weaklyHypometh 1.0000000 6.2469e-02 weaklyHypometh 0.9966849 6.4042e-02 insignificant 1.0000 7.4468e-01 insignificant -0.1246937 1.9779e-01 lowCoverage 1.0000e+00 lowCoverage chr8 38904750 38905750 29922 PLEKHA2 ENSG00000169499 0.795431 187 8 0.7441928 345 8 0.7441919 105 8 0.864271 206 8 0.81667 101 8 0.810801 322 8 0.7751054 170 8 0.786015 159 8 0.7481041 75 7 0.900000 37 5 0.8629306 376 8 0.7238095 60 8 0.844551 84 8 0.7091912 68 8 0.779018 89 8 0.6212798 47 6 0.998492 669 3 0.676103 159 8 0.945549 171 5 0.824855 233 8 0.525735 39 3 1.000000 1 0 0.8083732 190 8 0.681015 110 8 0.753571 31 4 0.883305 372 8 0.732738 75 8 0.875000 33 2 0.79612 206 6 0.8544359 347 8 0.8405470 345 8 0.819258 228 8 0.828147 214 8 0.7182941 139 8 0.7577571 283 8 1.0000000 7 0 0.8589154 171 8 0.847554 291 8 0.687303 265 8 0.658626 287 8 0.877193 183 8 0.767100 111 7 0.852045 267 8 0.7980542 0.835356 0.7131993 0.844031 0.818590 0.8111209 0.7640732 0.7794515 0.7135897 0.9015385 0.8683187 0.7304029 0.8285010 0.7096682 0.8052656 0.6143315 0.982884 0.7581268 0.9571622 0.8293675 0.551885 NA 0.7848913 0.767615 0.823752 0.887043 0.7610256 0.8769231 0.806737 0.8580401 0.8392257 0.8251786 0.8334895 0.7135749 0.76312057 0.9853072 0.8705385 0.8465454 0.775582 0.730156 0.8790823 0.807053 0.8519565 1 0.8667759 0.873546 -0.01099164 8 0.791072 0.789053 0.0020187 0.8244068 0.51946814 insignificant 1 1.00000 insignificant 0.866486 0.51171212 insignificant 1 1.00000 insignificant 0.00101938 0.9797280 insignificant 1.00000 insignificant 0.8671405 0.893213 -0.0123847 8 0.814956 0.801546 0.01340968 4.9570e-01 7.9264e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8988e-01 6.0954e-02 insignificant 1.0000e+00 1.0000000 insignificant -0.03658346 4.3664e-01 insignificant 1.0000e+00 insignificant 0.8667759 0.8688230 -2.6528e-03 8 0.791072 0.754880 3.6192e-02 2.7578e-01 3.2692e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.8739e-01 3.9440e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0300745 5.5226e-01 insignificant 1.0000e+00 insignificant 0.873924 0.893213 -0.0038956 8 0.825185 0.801546 0.0236386 3.1639e-01 1.6489e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6918e-01 2.7233e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0376028 4.8698e-01 insignificant 1.0000e+00 insignificant 0.8735458 0.8688230 0.0032149 8 0.789053 0.754880 0.03417281 4.1971e-01 4.2081e-01 insignificant 1.0000e+00 1.00000000 insignificant 5.0343e-01 2.8850e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0290551 0.61047058 insignificant 1.00000 insignificant 0.8932127 0.8710550 0.0127220 8 0.801546 0.817990 -0.0164442 7.6885e-02 5.0048e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.2029293 8.2253e-01 insignificant 1.0000 1.0000e+00 insignificant 0.0666579 2.8744e-01 insignificant 1.0000e+00 insignificant chr8 38912950 38913950 29924 PLEKHA2 ENSG00000169499 0.625714 33 2 0.4813850 155 5 0.5866667 82 5 0.520000 39 4 0.30875 114 5 0.533323 99 5 0.5827839 74 5 0.687669 135 5 0.5326016 128 5 0.401111 95 3 0.6088011 221 5 0.4924383 100 2 0.584598 93 5 0.9807692 22 1 0.470480 114 5 0.2483995 153 2 0.121884 135 2 0.346923 70 4 0.566195 163 5 0.491449 113 5 0.798571 52 5 0.577381 28 4 0.5458874 74 5 0.573718 70 5 0.700000 14 1 0.520622 206 5 0.771491 74 5 0.472222 22 1 0.52364 98 5 0.5706627 226 5 0.5685328 187 5 0.830901 165 5 0.024348 151 5 0.0537634 75 5 0.0108696 198 4 0.0000000 1 0 0.0251852 127 4 0.084569 245 5 0.400000 42 5 0.255357 49 5 0.361111 24 1 0.050000 14 1 0.366667 27 1 0.7773183 0.644446 0.3815789 0.617544 0.176773 0.6482794 0.2681463 0.6094480 0.2928434 0.1887427 0.5593736 0.2038966 0.4523245 0.8989815 0.2844086 0.2153921 0.177411 0.5749916 0.4788593 0.5311421 0.523214 0.5115636 0.4188027 0.630314 0.894737 0.613017 0.8024584 0.5285088 0.575120 0.6599349 0.6687304 0.8161874 0.0230549 0.2249576 0.00343249 NA 0.0649123 0.2822594 0.570175 0.448661 0.3888889 0.177538 0.4539474 1 0.3947615 0.651565 -0.22382675 5 0.499578 0.624351 -0.1247733 0.9960877 0.00016888 hypomethylated 1 0.08444 hypomethylated 0.970439 0.04986452 weaklyHypometh 1 1.00000 insignificant -0.11253853 0.0418297 lowCoverage 1.00000 lowCoverage 0.3947615 0.067839 0.3179694 5 0.499578 0.037952 0.46162622 5.4196e-19 1.0000e+00 hypermethylated 2.4635e-17 1.0000e+00 hypermethylated 4.4450e-10 1.0000e+00 hypermethylated 6.3500e-08 1.0000000 hypermethylated 0.47547433 9.2808e-11 lowCoverage 1.8562e-08 lowCoverage 0.3947615 0.3589744 4.9914e-02 2 0.499578 0.302898 1.9668e-01 3.6844e-07 8.3288e-01 lowCoverage 3.9277e-05 1.0000e+00 lowCoverage 8.3716e-05 9.8913e-01 lowCoverage 8.3568e-03 1.0000e+00 lowCoverage 0.2219699 1.9986e-02 lowCoverage 5.8782e-01 lowCoverage 0.650493 0.067754 0.5809482 5 0.520293 0.031626 0.4886663 8.5602e-25 1.0000e+00 hypermethylated 9.5113e-23 1.0000e+00 hypermethylated 1.1018e-09 1.0000e+00 hypermethylated 2.2036e-07 1.000000 hypermethylated 0.5880129 3.9599e-10 lowCoverage 1.3200e-07 lowCoverage 0.6515651 0.3589744 0.2681240 2 0.624351 0.302898 0.32145303 2.8249e-09 1.0000e+00 lowCoverage 3.5002e-07 1.00000000 lowCoverage 1.8937e-06 1.0000e+00 lowCoverage 3.1561e-04 1.000000 lowCoverage 0.3345085 0.00299920 lowCoverage 0.21423 lowCoverage 0.0678392 0.3589744 -0.2829251 2 0.037952 0.302898 -0.2649465 1.0000e+00 2.4015e-05 lowCoverage 1.0000000 5.5848e-04 lowCoverage 1.0000000 1.0771e-03 lowCoverage 1.0000 2.8470e-02 lowCoverage -0.2535044 1.5331e-02 lowCoverage 2.7377e-01 lowCoverage chr8 39955650 39956650 29936 IDO2 ENSG00000188676 0.897170 178 5 0.8762975 144 5 0.8739218 149 5 0.961573 246 5 0.84815 65 5 0.910485 295 5 0.9693643 126 5 0.879780 126 5 0.9342577 149 5 0.951681 156 5 0.9559489 152 5 0.9409913 104 5 0.918046 161 5 0.9588889 72 3 0.950931 163 5 0.9321587 114 5 0.942735 70 4 0.936666 237 5 0.921129 96 5 0.921726 197 5 0.960000 58 4 0.843281 132 5 0.8963262 156 5 0.863917 92 3 0.983333 62 4 0.814295 154 5 0.813151 115 5 0.886243 95 5 0.85522 116 5 0.9515246 118 5 0.9199706 140 5 0.888520 264 5 0.899726 118 5 0.7729507 83 5 0.5625000 57 4 0.8277778 23 2 0.7352436 151 5 0.950426 96 5 0.985735 265 5 0.944468 196 5 0.895943 181 5 0.936005 167 5 0.914548 266 5 0.9094801 0.867181 0.8459626 0.938309 0.791730 0.9330858 0.9678496 0.9130331 0.9261051 0.9509463 0.9379060 0.9296622 0.9090843 0.9546839 0.9611188 0.8800136 0.963897 0.9303000 0.9025971 0.9204400 0.959589 0.8832760 0.8956415 0.859707 0.965468 0.870999 0.8665335 0.9249746 0.815350 0.9473613 0.9409727 0.8870041 0.9171533 0.7734625 0.52021942 0.8349505 0.8797184 0.9396265 0.975060 0.945193 0.9195411 0.940369 0.9098901 4 0.9186667 0.896804 0.02244849 5 0.934911 0.903122 0.0317888 0.0030712 0.94204618 weaklyHypermeth 1 1.00000 insignificant 0.053264 0.82995692 insignificant 1 1.00000 insignificant 0.03444673 0.0701389 lowCoverage 1.00000 lowCoverage 0.9186667 0.861742 0.0529092 5 0.934911 0.726684 0.20822637 1.3931e-03 3.3064e-01 weaklyHypermeth 1.5652e-02 1.0000e+00 weaklyHypermeth 1.0880e-02 3.1439e-01 weaklyHypermeth 1.4750e-01 1.0000000 insignificant 0.13265767 6.4097e-02 lowCoverage 7.8166e-01 lowCoverage 0.9186395 0.9386047 -2.2300e-02 5 0.921893 0.942470 -2.0578e-02 9.4972e-01 5.6216e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.5543e-01 1.9981e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0112447 5.3116e-01 lowCoverage 1.0000e+00 lowCoverage 0.896804 0.861742 0.0273683 5 0.903122 0.726684 0.1764376 5.4824e-01 4.2790e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.1088e-01 6.2988e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0982109 1.4445e-01 lowCoverage 1.0000e+00 lowCoverage 0.8966667 0.9386047 -0.0449097 5 0.883746 0.942470 -0.05872408 9.9705e-01 4.2994e-03 weaklyHypometh 1.0000e+00 0.40134489 insignificant 9.6253e-01 8.3191e-02 insignificant 1.0000e+00 1.000000 insignificant -0.0456914 0.06031914 lowCoverage 1.00000 lowCoverage 0.8666667 0.9386047 -0.0751562 5 0.872021 0.942470 -0.0704492 6.9130e-01 2.4001e-02 weaklyHypometh 1.0000000 2.2858e-01 insignificant 0.5702149 8.6813e-03 weaklyHypometh 1.0000 1.4469e-01 insignificant -0.1439023 4.9852e-02 lowCoverage 5.8649e-01 lowCoverage chr8 40094250 40095250 29944 IDO2 ENSG00000188676 0.798736 871 12 0.7009126 476 12 0.6856717 400 12 0.760688 520 12 0.83676 422 12 0.762853 829 12 0.8175846 620 12 0.760213 582 12 0.6379241 577 12 0.751785 605 12 0.7817851 756 12 0.6483873 377 11 0.825927 668 12 0.9181985 160 7 0.775681 672 12 0.7790438 327 12 0.804492 262 11 0.774624 607 12 0.832694 557 12 0.788049 563 12 0.657445 179 12 0.734916 199 12 0.8101234 440 12 0.799028 221 12 0.829082 206 12 0.815133 537 12 0.727816 304 12 0.712777 214 11 0.82475 671 12 0.8213073 600 12 0.7832352 521 12 0.729549 732 12 0.682526 407 12 0.7435221 442 12 0.6888010 561 12 0.7049275 116 10 0.5864290 367 12 0.827906 528 12 0.826470 844 12 0.861042 661 12 0.805515 710 12 0.803629 654 12 0.764917 548 12 0.8124486 0.751752 0.7195492 0.809278 0.808381 0.8131171 0.7775014 0.7875519 0.7399023 0.8212738 0.7998571 0.7489573 0.8170311 0.8617968 0.8114274 0.7554405 0.792402 0.8353057 0.8275520 0.8368299 0.731815 0.8190074 0.7991964 0.790104 0.861547 0.828187 0.7660583 0.8096147 0.808528 0.8146330 0.7925873 0.8069007 0.7343444 0.7779443 0.80191467 0.7788773 0.7046384 0.8024000 0.817107 0.828919 0.8510440 0.843120 0.8260754 12 0.7953184 0.799668 -0.00378720 12 0.717086 0.778303 -0.0612166 0.4357964 0.40602189 insignificant 1 1.00000 insignificant 0.645836 0.31818638 insignificant 1 1.00000 insignificant 0.00167016 0.9397270 insignificant 1.00000 insignificant 0.7954084 0.776126 0.0246452 12 0.765956 0.688969 0.07698698 5.0983e-03 9.9930e-01 weaklyHypermeth 5.1498e-02 1.0000e+00 weaklyHypermeth 4.8033e-02 9.7878e-01 weaklyHypermeth 5.0561e-01 1.0000000 insignificant 0.06641507 1.0285e-01 insignificant 1.0000e+00 insignificant 0.7953917 0.8659643 -3.2359e-02 12 0.764892 0.798538 -3.3646e-02 9.9746e-01 2.7138e-03 weaklyHypometh 1.0000e+00 2.4671e-01 insignificant 9.9911e-01 1.8718e-02 weaklyHypometh 1.0000e+00 8.2400e-01 insignificant -0.0402141 8.6586e-02 insignificant 1.0000e+00 insignificant 0.799460 0.776126 0.0316012 12 0.746632 0.688969 0.0576631 1.2616e-03 9.7068e-01 weaklyHypermeth 1.4842e-02 1.0000e+00 weaklyHypermeth 8.4961e-03 9.6237e-01 weaklyHypermeth 1.1328e-01 1.000000 insignificant 0.0647449 1.1321e-01 insignificant 1.0000e+00 insignificant 0.7996266 0.8659643 -0.0313961 12 0.763523 0.798538 -0.03501460 9.9569e-01 6.8007e-03 weaklyHypometh 1.0000e+00 0.56672682 insignificant 9.7784e-01 1.6552e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.0418842 0.08765473 insignificant 1.00000 insignificant 0.7761256 0.8659251 -0.0583575 12 0.688969 0.784148 -0.0951787 9.9991e-01 7.8716e-06 weaklyHypometh 1.0000000 2.0715e-04 weaklyHypometh 0.9991141 1.5155e-03 weaklyHypometh 1.0000 3.6084e-02 weaklyHypometh -0.1066291 2.0511e-02 weaklyHypometh 3.2048e-01 insignificant chr8 41068650 41069650 29991 ENSG00000206867 0.763740 265 5 0.8100090 301 5 0.8642396 102 4 0.853700 225 5 0.88331 75 5 0.922654 351 5 0.9217846 151 5 0.933061 129 5 0.8685714 82 4 0.864778 66 3 0.9134394 241 5 0.9500000 35 2 0.907273 74 3 0.9333333 55 3 0.971282 110 3 1.0000000 58 4 NA 0 0 0.881634 547 5 0.988762 160 3 0.919689 304 5 1.000000 41 3 0.879755 65 2 0.7114430 127 4 0.901901 58 5 0.906994 339 5 0.771895 212 5 0.805632 122 4 0.944444 45 3 0.91895 157 4 0.9015240 289 5 0.9280502 296 5 0.825098 197 5 0.504498 171 5 0.6332197 196 5 0.4907444 288 4 0.6220356 115 3 0.4941947 177 5 0.732583 227 5 0.770889 254 5 0.907255 212 5 0.861342 330 5 0.789014 192 3 0.902730 252 5 0.9072673 0.878230 0.9352945 0.912767 0.803739 0.9009796 0.9228647 0.9281986 0.8872253 0.9088553 0.9367719 0.8810096 0.9208042 0.9903846 0.9383876 0.9978506 NA 0.8876945 0.9775824 0.9095736 1.000000 0.9107074 0.9202349 0.932271 0.929926 0.937075 0.8646139 0.8750000 0.895495 0.9455324 0.9406429 0.8899521 0.5725040 0.6758074 0.52362840 0.6759641 0.4410780 0.6952683 0.948962 0.906197 0.8702782 0.910345 0.9270102 2 0.9084359 0.921296 -0.01312316 5 0.788290 0.859124 -0.0708342 0.8989523 0.41534026 insignificant 1 1.00000 insignificant 0.857170 0.89487606 insignificant 1 1.00000 insignificant 0.02805790 0.3124671 lowCoverage 1.00000 lowCoverage 0.9084359 0.564736 0.3164015 5 0.788290 0.638742 0.14954809 4.0668e-18 9.9700e-01 hypermethylated 1.6945e-16 1.0000e+00 hypermethylated 3.1013e-07 9.9414e-01 hypermethylated 1.4097e-05 1.0000000 hypermethylated 0.32315223 2.4059e-04 lowCoverage 8.5925e-03 lowCoverage 0.9083258 0.9048387 1.7598e-03 5 0.753005 0.742858 1.0147e-02 6.8653e-01 9.1906e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.2180e-01 9.9247e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0564521 1.2285e-01 lowCoverage 1.0000e+00 lowCoverage 0.921296 0.564736 0.3291986 5 0.859124 0.638742 0.2203823 1.1619e-12 9.7454e-01 hypermethylated 3.3198e-11 1.0000e+00 hypermethylated 1.5975e-06 9.9352e-01 hypermethylated 6.1444e-05 1.000000 hypermethylated 0.2950943 1.7640e-04 lowCoverage 6.5334e-03 lowCoverage 0.9212152 0.9048387 0.0151789 5 0.835645 0.742858 0.09278700 3.2329e-01 9.1677e-01 insignificant 1.0000e+00 1.00000000 insignificant 1.4610e-01 9.8338e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0283942 0.45856851 lowCoverage 1.00000 lowCoverage 0.5643649 0.9048387 -0.3287095 5 0.578532 0.742858 -0.1643257 6.6877e-01 6.4884e-07 hypomethylated 1.0000000 2.0276e-05 hypomethylated 0.4329802 4.6076e-04 hypomethylated 1.0000 1.5888e-02 hypomethylated -0.2667002 5.1272e-04 lowCoverage 2.6985e-02 lowCoverage chr8 41231750 41232750 30005 ENSG00000206867 0.667492 93 5 0.617424 47 5 0.403333 21 2 0.702424 68 5 0.4000000 22 3 0.851561 107 5 0.4000000 11 0 0.8022222 75 5 0.7226190 36 5 0.9200000 22 2 0.7708250 134 5 0.8000000 8 0 0.7924242 75 5 NA 0 0 0.5761905 64 5 0.5000000 2 0 0.490000 21 2 0.7121429 81 5 0.857500 69 5 0.713381 107 5 0.834310 45 5 0.4402088 66 5 0.75830 83 5 0.723333 20 1 0.777778 27 2 0.733450 97 5 0.6977778 78 5 0.680000 26 5 0.6070330 42 5 0.696168 129 5 0.615530 119 5 0.7501300 131 5 0.6090077 63 5 0.9308995 125 5 0.0000000 1 0 0.261905 46 5 0.8428571 40 5 0.262937 133 5 0.215331 110 5 0.463449 207 5 0.5602956 103 5 0.445000 89 5 0.266340 90 5 0.7029010 0.6462542 0.409259 0.7424242 0.459877 0.8478460 0.3703704 0.7781305 0.7166005 0.9555556 0.808840 0.7500000 0.7918070 NA 0.5731922 0.6560008 0.4574074 0.7526455 0.9007716 0.7449069 0.842423 0.4012393 0.808722 0.773765 0.820988 0.7743556 0.7055556 0.681481 0.6742776 0.7189988 0.6241978 0.754762 0.5571928 0.9243288 NA 0.1732804 0.847884 0.2769216 0.180510 0.4490201 0.6097762 0.4412037 0.2506835 0 0.7121355 0.683662 0.03397680 5 0.719082 0.686430 0.03265199 2.2081e-01 0.9343640 insignificant 1.0000e+00 1.0000 insignificant 4.7664e-01 0.640916 insignificant 1.0000e+00 1 insignificant -0.0244378 0.613774 lowCoverage 1 lowCoverage 0.7121355 0.5931373 0.1197842 5 0.719082 0.594758 0.1243240 2.0512e-02 0.99841859 weaklyHypermeth 3.4187e-01 1.000000 insignificant 1.6439e-01 0.9266367 insignificant 1.0000e+00 1 insignificant 0.18379586 2.8278e-01 lowCoverage 1.0000e+00 lowCoverage 0.7121355 0.4006678 3.1280e-01 5 0.719082 0.399909 0.3191728 1.6283e-12 1.00000000 hypermethylated 8.1415e-10 1.000000 hypermethylated 5.0697e-07 1.0000000 hypermethylated 2.5349e-04 1.00000 hypermethylated 0.2783137 0.00737035 lowCoverage 0.491357 lowCoverage 0.683662 0.593137 0.0864786 5 0.686430 0.594758 0.0916720 8.5874e-02 0.9740486 insignificant 1.0000e+00 1.00000 insignificant 1.0584e-01 0.8969393 insignificant 1.0000e+00 1 insignificant 0.2082336 2.2777e-01 lowCoverage 1.0000e+00 lowCoverage 0.683662 0.400668 0.2850167 5 0.686430 0.399909 0.2865208 2.4073e-10 1.00000000 hypermethylated 2.4073e-07 1.00000 hypermethylated 3.4045e-08 1.000000 hypermethylated 3.4045e-05 1 hypermethylated 0.30275152 0.0057953 lowCoverage 1.00000 lowCoverage 0.593137 0.4006678 0.1936471 5 0.594758 0.399909 0.1948488 0.037727 9.9410e-01 weaklyHypermeth 1 1.0000e+00 insignificant 0.062358 9.8542e-01 insignificant 1 1.0000e+00 insignificant 0.0945179 5.8189e-01 lowCoverage 1.0000000 lowCoverage chr8 41239850 41240850 30006 ENSG00000206867 0.939866 278 5 0.705655 242 5 0.710061 200 5 0.863053 252 5 0.8788878 77 5 0.904193 344 5 0.8345381 130 5 0.7504493 209 5 0.8172183 211 5 0.9136233 120 5 0.8751691 228 5 0.8824602 78 5 0.8478204 164 5 0.763815 90 3 0.8517980 218 5 0.5613492 57 5 0.666667 46 3 0.8450102 226 5 0.831295 115 5 0.873247 265 5 0.954113 39 2 0.6967026 118 5 0.84072 132 4 0.823994 87 5 0.848571 40 4 0.920640 359 5 0.8785455 109 5 0.960070 101 5 0.9096554 122 5 0.898039 335 5 0.864356 212 5 0.9082827 305 5 0.7764380 212 5 0.8311111 66 5 0.6735577 97 2 0.750000 5 0 0.9306861 199 5 0.647566 227 5 0.846667 204 5 0.863500 215 5 0.8300216 167 5 0.830667 207 5 0.804347 206 5 0.9174491 0.6892275 0.673267 0.8133779 0.879848 0.8838401 0.7834191 0.6949598 0.7613433 0.9177985 0.860025 0.7640999 0.7153059 0.7362516 0.7536174 0.5296270 0.5192579 0.7732107 0.7202570 0.8088181 0.946953 0.5234275 0.821901 0.770979 0.748158 0.8911922 0.7876989 0.924787 0.8412493 0.8835832 0.7568038 0.901524 0.6447557 0.7328125 0.7605140 0.5067755 0.885704 0.4352097 0.724531 0.7477933 0.7437411 0.6788941 0.6596647 4 0.7943662 0.845329 -0.05518700 5 0.838025 0.886649 -0.04862384 9.9631e-01 0.0030655 weaklyHypometh 1.0000e+00 0.6131 insignificant 9.9858e-01 0.003408 weaklyHypometh 1.0000e+00 1 insignificant -0.0594984 0.052690 lowCoverage 1 lowCoverage 0.7943662 0.6488834 0.1353926 5 0.838025 0.776239 0.0617864 1.0849e-02 0.06454382 weaklyHypermeth 2.0090e-01 1.000000 insignificant 5.5465e-01 0.0074713 inconclusive 1.0000e+00 1 insignificant 0.04758231 3.4735e-01 lowCoverage 1.0000e+00 lowCoverage 0.7943662 0.6956957 8.7006e-02 5 0.838025 0.833713 0.0043124 7.6437e-02 0.03646058 inconclusive 1.0000e+00 1.000000 insignificant 9.8562e-02 0.0528249 insignificant 1.0000e+00 1.00000 insignificant -0.0192316 0.41950632 lowCoverage 1.000000 lowCoverage 0.845329 0.648883 0.1918617 5 0.886649 0.776239 0.1104102 7.8425e-03 0.2178039 weaklyHypermeth 1.5082e-01 1.00000 insignificant 2.4360e-01 0.3835171 insignificant 1.0000e+00 1 insignificant 0.1070807 5.5527e-02 lowCoverage 1.0000e+00 lowCoverage 0.845329 0.695696 0.1440209 5 0.886649 0.833713 0.0529363 1.9492e-03 0.32663078 weaklyHypermeth 2.4365e-01 1.00000 insignificant 7.7717e-03 0.625788 weaklyHypermeth 8.6352e-01 1 insignificant 0.04026672 0.0959796 lowCoverage 1.00000 lowCoverage 0.648883 0.6956957 -0.0511185 5 0.776239 0.833713 -0.0574739 0.031596 2.8203e-01 inconclusive 1 1.0000e+00 insignificant 0.064399 6.1835e-01 insignificant 1 1.0000e+00 insignificant -0.0668139 1.8090e-01 lowCoverage 1.0000000 lowCoverage chr8 41291950 41292950 30011 SFRP1 ENSG00000104332 0.880398 106 3 0.742433 114 7 0.715751 198 7 0.882623 62 3 0.7927875 38 3 0.880926 154 3 0.8387446 52 3 0.9141865 81 3 0.7993967 86 3 0.8119658 43 3 0.8648148 92 3 0.8888889 32 3 0.6898246 69 3 0.900000 27 3 0.8410256 58 3 0.7863248 41 3 0.814815 26 3 0.8949875 80 3 0.851852 21 3 0.931072 166 7 0.857143 14 1 0.7109557 48 3 0.84593 139 7 0.604167 33 3 0.914141 28 3 0.905072 209 7 0.7833044 46 3 0.938003 63 3 0.8517483 39 3 0.892012 192 7 0.957792 135 7 0.7461687 167 3 0.0949740 183 7 0.2849003 31 3 0.3860759 163 2 0.111111 19 3 0.2117647 104 3 0.261420 127 7 0.739361 89 6 0.683442 61 5 0.3670163 38 3 0.797792 69 3 0.523016 77 3 0.8406908 0.6927573 0.730474 0.8926809 0.792270 0.8364751 0.8336546 0.9211542 0.8056066 0.8102965 0.871218 0.8802083 0.6825822 0.8937500 0.8385817 0.7954728 0.8159722 0.7491091 0.8493924 0.8446215 0.876116 0.7067308 0.833273 0.831380 0.919152 0.8789213 0.7823796 0.933594 0.8477601 0.8433105 0.9275779 0.859426 0.0630482 0.2982772 0.1261570 0.1171875 0.218435 0.2122973 0.667975 0.8464577 0.6112416 0.5174932 0.5466146 3 0.8091850 0.870504 -0.05379993 3 0.794953 0.888187 -0.09323341 9.9934e-01 0.0021282 lowCoverage 1.0000e+00 0.6131 lowCoverage 6.5125e-01 0.366845 lowCoverage 1.0000e+00 1 lowCoverage 0.0022708 0.947006 lowCoverage 1 lowCoverage 0.8091850 0.1754386 0.6468436 3 0.794953 0.188238 0.6067155 1.5663e-41 1.00000000 lowCoverage 5.2211e-39 1.000000 lowCoverage 2.6895e-11 1.0000000 lowCoverage 4.4824e-09 1 lowCoverage 0.61109989 1.1437e-05 lowCoverage 1.1437e-03 lowCoverage 0.8091850 0.6437126 1.6267e-01 3 0.794953 0.650662 0.1442911 2.6365e-06 0.99993703 lowCoverage 8.7883e-04 1.000000 lowCoverage 4.8464e-05 0.9999929 lowCoverage 9.6928e-03 1.00000 lowCoverage 0.2140155 0.05139170 lowCoverage 1.000000 lowCoverage 0.870504 0.175439 0.6952711 5 0.888187 0.188238 0.6999489 1.2830e-35 1.0000000 hypermethylated 6.4148e-33 1.00000 hypermethylated 1.6505e-09 1.0000000 hypermethylated 2.7509e-07 1 hypermethylated 0.6088291 7.7152e-07 lowCoverage 1.1022e-04 lowCoverage 0.870504 0.643713 0.2200635 3 0.888187 0.650662 0.2375245 2.8741e-09 0.99999954 lowCoverage 1.4371e-06 1.00000 lowCoverage 1.4250e-04 0.999985 lowCoverage 4.7498e-02 1 lowCoverage 0.21174476 0.0512460 lowCoverage 1.00000 lowCoverage 0.175439 0.6437126 -0.4859048 3 0.188238 0.650662 -0.4624245 1.000000 6.5403e-13 lowCoverage 1 1.0549e-10 lowCoverage 0.999999 1.4589e-05 lowCoverage 1 1.4589e-03 lowCoverage -0.3970844 3.8237e-03 lowCoverage 0.2920556 lowCoverage chr8 41337850 41338850 30014 SFRP1 ENSG00000104332 0.059760 96 5 0.195248 425 5 0.211528 269 5 0.074747 64 4 0.1038651 222 5 0.215980 158 5 0.0984784 368 5 0.1898236 225 5 0.0979122 242 5 0.1029545 177 5 0.0854959 278 5 0.0612617 233 5 0.1212397 239 5 0.095238 63 3 0.0495235 279 5 0.0793968 226 5 0.165265 201 4 0.0981513 50 4 0.074595 210 5 0.162443 117 5 0.246699 87 5 0.1071429 43 3 0.11863 185 5 0.095079 130 5 0.333333 29 3 0.105431 364 5 0.1446052 185 5 0.084596 104 5 0.1001429 220 5 0.100698 387 5 0.040782 301 5 0.0595433 158 5 0.1182488 248 5 0.1774246 128 5 0.0432099 70 2 0.388889 13 1 0.2933195 185 5 0.131767 268 5 0.250008 151 4 0.141379 98 5 0.0625000 31 3 0.139394 36 4 0.154545 58 3 0.1016670 0.0959892 0.085336 0.1276400 0.105975 0.2626798 0.1249994 0.0867947 0.1588252 0.1187565 0.121678 0.0791148 0.1248864 0.1002935 0.0774959 0.0931500 0.0828689 0.1565365 0.0994448 0.1413232 0.038982 0.1771510 0.166687 0.145428 0.144521 0.1161389 0.0848766 0.067386 0.1224067 0.1131763 0.0697415 0.069705 0.1024580 0.1972280 0.0818248 0.2496100 0.101323 0.2110493 0.165734 0.2379506 0.0866477 0.2291667 0.2530992 3 0.1009174 0.078431 0.00631163 5 0.147652 0.113778 0.03387432 1.9515e-01 0.8589115 insignificant 1.0000e+00 1.0000 insignificant 1.2941e-01 0.931585 insignificant 1.0000e+00 1 insignificant -0.0109112 0.686113 lowCoverage 1 lowCoverage 0.1004113 0.1447368 -0.0401135 5 0.118409 0.286304 -0.1678947 6.9752e-01 0.00042066 weaklyHypometh 1.0000e+00 0.082387 weaklyHypometh 7.6109e-01 0.0487252 weaklyHypometh 1.0000e+00 1 insignificant -0.07499777 2.1170e-01 lowCoverage 1.0000e+00 lowCoverage 0.1004599 0.1711230 -7.1393e-02 3 0.138144 0.265479 -0.1273345 6.9285e-02 0.00063786 lowCoverage 1.0000e+00 0.134584 lowCoverage 5.1870e-02 0.0431519 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.0324200 0.35685519 lowCoverage 1.000000 lowCoverage 0.078368 0.144737 -0.0492088 5 0.117714 0.286304 -0.1685903 7.5952e-01 0.0019744 weaklyHypometh 1.0000e+00 0.49359 insignificant 8.2740e-01 0.0086277 weaklyHypometh 1.0000e+00 1 insignificant -0.0640866 2.9678e-01 lowCoverage 1.0000e+00 lowCoverage 0.078476 0.171123 -0.0827893 3 0.137333 0.265479 -0.1281460 1.5150e-01 0.00039232 lowCoverage 1.0000e+00 0.19616 lowCoverage 1.9292e-01 0.164400 lowCoverage 1.0000e+00 1 lowCoverage -0.02150877 0.5863677 lowCoverage 1.00000 lowCoverage 0.143798 0.1711230 -0.0412359 3 0.167355 0.265479 -0.0981240 0.095572 3.1204e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.083907 6.6359e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.0425778 4.9712e-01 lowCoverage 1.0000000 lowCoverage chr8 41660350 41661350 30022 ANK1 ENSG00000029534 0.867324 756 16 0.821374 580 16 0.707184 242 14 0.927479 676 16 0.8600733 166 8 0.873559 1114 16 0.7126212 300 16 0.9396773 537 16 0.8343079 342 16 0.8313205 305 13 0.9130740 728 16 0.6763792 75 4 0.9119684 538 12 0.885906 260 15 0.8209896 286 15 0.6493506 131 8 0.875000 5 0 0.8663498 1097 16 0.931767 582 16 0.935757 668 16 0.791645 236 16 0.8352219 287 15 0.82231 356 16 0.712428 192 10 0.681688 472 16 0.937189 771 16 0.8953849 299 14 0.694043 179 7 0.8684995 670 16 0.879850 837 16 0.923281 768 16 0.9091035 733 16 0.7476586 441 16 0.8455007 422 16 0.8333968 407 9 0.715371 103 10 0.7131071 449 17 0.817367 874 16 0.910113 490 13 0.857714 600 16 0.8670635 547 16 0.868586 538 16 0.829223 545 16 0.9270034 0.8227283 0.807960 0.9216662 0.856454 0.9093418 0.8713426 0.9337281 0.8630702 0.9274964 0.921018 0.7523766 0.9117895 0.8820814 0.8707636 0.8118933 0.7570451 0.7727258 0.9171994 0.9127261 0.939721 0.8894557 0.904082 0.833567 0.873115 0.9121411 0.8495899 0.912307 0.9035864 0.9227137 0.8926864 0.918850 0.8022523 0.8514066 0.7511563 0.6286158 0.778717 0.7654783 0.911396 0.8729990 0.8570697 0.8411203 0.8286480 6 0.8895640 0.912353 -0.02143298 16 0.794169 0.745791 0.04837790 4.4307e-01 0.0140913 weaklyHypometh 1.0000e+00 1.0000 insignificant 6.3245e-01 0.013688 weaklyHypometh 1.0000e+00 1 insignificant 0.0128526 0.699336 insignificant 1 insignificant 0.8897067 0.7798812 0.0977355 16 0.830002 0.736868 0.0931340 1.3976e-09 0.33651465 weaklyHypermeth 6.0765e-08 1.000000 weaklyHypermeth 3.3435e-03 0.2193490 weaklyHypermeth 9.0365e-02 1 weaklyHypermeth 0.06333953 6.8028e-02 insignificant 1.0000e+00 insignificant 0.8899680 0.8753218 4.6808e-03 16 0.850478 0.825205 0.0252737 2.7738e-01 0.36907161 insignificant 1.0000e+00 1.000000 insignificant 5.0924e-01 0.6912283 insignificant 1.0000e+00 1.00000 insignificant -0.0244668 0.31421671 insignificant 1.000000 insignificant 0.912338 0.779592 0.1122141 16 0.741984 0.704830 0.0371541 1.4190e-08 0.5549046 weaklyHypermeth 7.0950e-07 1.00000 weaklyHypermeth 3.6565e-02 0.4145388 weaklyHypermeth 7.3130e-01 1 insignificant 0.0504869 1.8165e-01 insignificant 1.0000e+00 insignificant 0.913096 0.874954 0.0311800 16 0.816618 0.777586 0.0390323 2.5452e-02 0.86287509 weaklyHypermeth 1.0000e+00 1.00000 insignificant 2.3982e-01 0.973848 insignificant 1.0000e+00 1 insignificant -0.03731939 0.2216284 insignificant 1.00000 insignificant 0.780379 0.8752759 -0.1150766 16 0.760555 0.816465 -0.0559099 0.218066 2.7941e-03 weaklyHypometh 1 6.6526e-02 weaklyHypometh 0.465019 1.5184e-01 insignificant 1 1.0000e+00 insignificant -0.0878063 1.4875e-02 weaklyHypometh 0.5721022 insignificant chr8 41749350 41750350 30029 ANK1 ENSG00000029534 0.832949 103 4 0.897018 76 5 0.898290 112 5 0.782012 52 1 0.9271373 63 4 0.882534 162 5 0.8437646 88 5 0.8011905 76 5 0.8699451 86 5 0.9416446 72 5 0.8790686 142 5 0.9126984 48 4 0.9313853 86 4 1.000000 1 0 0.8807033 87 3 0.6041667 23 3 0.774762 38 4 0.6527778 81 4 0.933333 24 3 0.925838 138 5 0.985714 41 3 0.8489899 52 4 0.91864 106 5 0.898421 47 4 0.975000 16 1 0.844036 95 5 0.8305303 71 4 0.908333 67 5 0.8946199 47 4 0.948214 119 5 0.950000 86 5 0.9246104 217 5 0.6366167 128 5 0.7525146 57 3 0.1590909 91 2 0.666667 12 1 0.7466667 57 5 0.681448 135 5 0.985000 77 3 0.716292 100 4 0.9195360 75 3 0.808333 97 3 0.870330 86 4 0.8428070 0.8871701 0.873367 0.7777129 0.929981 0.9017785 0.8301054 0.7697723 0.8507453 0.9135509 0.877805 0.8837819 0.9696687 NA 0.8505342 0.6256097 0.7402070 0.7852657 0.9246377 0.9023280 0.967702 0.8184892 0.897255 0.867735 0.943478 0.8620724 0.8159091 0.937785 0.8297686 0.9274845 0.9195652 0.917884 0.6476642 0.7246275 0.4407508 0.4823839 0.757681 0.5805627 0.966087 0.7018547 0.8913734 0.8427536 0.8312470 2 0.8690629 0.898340 -0.02968477 5 0.880019 0.910686 -0.03066759 9.8834e-01 0.1147009 insignificant 1.0000e+00 1.0000 insignificant 9.9260e-01 0.064817 insignificant 1.0000e+00 1 insignificant -0.0520317 0.055785 lowCoverage 1 lowCoverage 0.8690629 0.4770833 0.3558612 4 0.880019 0.622450 0.2575688 9.6898e-16 0.97768652 lowCoverage 6.9213e-14 1.000000 lowCoverage 8.6197e-05 0.5358871 lowCoverage 3.9181e-03 1 lowCoverage 0.25139366 3.9655e-02 lowCoverage 1.0000e+00 lowCoverage 0.8690629 0.8367816 3.1142e-02 3 0.880019 0.840194 0.0398243 8.5214e-03 0.88734314 lowCoverage 6.5549e-01 1.000000 lowCoverage 3.7402e-01 0.2963801 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.0013373 0.97994150 lowCoverage 1.000000 lowCoverage 0.898340 0.477083 0.3864889 4 0.910686 0.622450 0.2882364 7.6630e-12 0.9991617 lowCoverage 5.1087e-10 1.00000 lowCoverage 1.4991e-04 0.9567788 lowCoverage 7.3558e-03 1 lowCoverage 0.3034253 2.0545e-02 lowCoverage 7.3375e-01 lowCoverage 0.898340 0.836782 0.0601485 3 0.910686 0.840194 0.0704919 9.3372e-03 0.98364320 lowCoverage 7.3617e-01 1.00000 lowCoverage 2.2281e-01 0.812062 lowCoverage 1.0000e+00 1 lowCoverage 0.05069433 0.3445516 lowCoverage 1.00000 lowCoverage 0.477083 0.8367816 -0.3179230 3 0.622450 0.840194 -0.2177445 0.996105 6.5864e-04 lowCoverage 1 1.9959e-02 lowCoverage 0.897490 1.7997e-02 lowCoverage 1 4.4724e-01 lowCoverage -0.2527310 4.1832e-02 lowCoverage 0.9728392 lowCoverage chr8 42116250 42117250 30045 MYST3 ENSG00000083168 0.036150 1472 28 0.019858 1355 34 0.017836 1734 34 0.013100 1164 28 0.0012260 1029 25 0.015783 1911 34 0.0027473 1095 25 0.0015638 1006 27 0.0020898 1229 25 0.0030225 1464 25 0.0065344 930 27 0.0068046 1025 25 0.0021889 985 25 0.041784 661 21 0.0065827 1298 25 0.0047513 931 25 0.010204 382 14 0.0054989 1449 28 0.002227 1026 25 0.046950 1525 26 0.008125 396 22 0.0010163 585 22 0.02535 1026 32 0.000000 824 26 0.016667 406 23 0.014887 1638 32 0.0021423 1317 25 0.000000 498 25 0.0023107 1467 25 0.013930 1601 32 0.015282 1482 32 0.0092376 1506 32 0.0215327 1184 34 0.0034851 1072 24 0.0084084 1520 26 0.002000 377 25 0.0080226 656 25 0.026851 1473 34 0.020957 1673 29 0.013432 1401 29 0.0097445 999 28 0.044093 1768 25 0.018096 1161 29 0.0039785 0.0099097 0.012725 0.0023114 0.001972 0.0048564 0.0025788 0.0017302 0.0022678 0.0041241 0.008984 0.0077217 0.0025841 0.0051047 0.0063518 0.0071792 0.0057875 0.0027801 0.0028324 0.0012594 0.011609 0.0024973 0.026527 0.000000 0.022705 0.0097435 0.0031906 0.000000 0.0031146 0.0095512 0.0093291 0.004579 0.0156243 0.0039696 0.0018635 0.0023088 0.012695 0.0075306 0.007160 0.0048488 0.0067278 0.0020883 0.0094189 25 0.0082421 0.012711 -0.00190253 31 0.039296 0.011483 0.02781332 3.3354e-01 0.9978968 insignificant 1.0000e+00 1.0000 insignificant 7.8334e-01 0.999735 insignificant 1.0000e+00 1 insignificant 0.0032661 0.409943 insignificant 1 insignificant 0.0081707 0.0151250 -0.0027754 31 0.013331 0.017101 -0.0037702 9.9813e-01 0.14982706 insignificant 1.0000e+00 1.000000 insignificant 9.9856e-01 0.5197784 insignificant 1.0000e+00 1 insignificant 0.00062847 9.0537e-01 insignificant 1.0000e+00 insignificant 0.0082837 0.0068601 -2.5808e-06 25 0.049831 0.025517 0.0243139 5.3927e-01 0.81139387 insignificant 1.0000e+00 1.000000 insignificant 9.6916e-01 0.7638117 insignificant 1.0000e+00 1.00000 insignificant -0.0089194 0.23380590 insignificant 1.000000 insignificant 0.012714 0.015127 -0.0010309 31 0.012121 0.017576 -0.0054557 9.9997e-01 0.0481580 weaklyHypometh 1.0000e+00 1.00000 insignificant 1.0000e+00 0.4845988 insignificant 1.0000e+00 1 insignificant -0.0026376 5.9423e-01 insignificant 1.0000e+00 insignificant 0.012712 0.006721 0.0024513 26 0.011793 0.014073 -0.0022797 9.9995e-01 0.85443397 insignificant 1.0000e+00 1.00000 insignificant 1.0000e+00 0.891622 insignificant 1.0000e+00 1 insignificant -0.01218552 0.1152691 insignificant 1.00000 insignificant 0.015130 0.0066676 0.0026702 25 0.018078 0.014570 0.0035088 0.187174 9.9979e-01 insignificant 1 1.0000e+00 insignificant 0.902686 9.9929e-01 insignificant 1 1.0000e+00 insignificant -0.0095479 2.3051e-01 insignificant 1.0000000 insignificant chr8 42171650 42172650 30047 PLAT ENSG00000104368 0.516167 478 11 0.481146 508 11 0.451999 369 11 0.469273 443 10 0.3312155 246 11 0.640359 644 11 0.3862251 407 11 0.5080326 389 11 0.4497017 340 11 0.4556166 339 11 0.5979523 471 11 0.4252525 195 11 0.1987185 371 11 0.508182 175 9 0.4106765 431 11 0.4508979 150 7 0.296450 138 7 0.6223237 651 10 0.270122 465 11 0.323150 645 11 0.540251 182 9 0.3669106 204 9 0.66675 376 11 0.371113 227 11 0.449723 137 9 0.313199 589 11 0.3394439 320 11 0.436119 158 11 0.4552387 388 9 0.360826 636 11 0.352729 616 11 0.5044600 627 11 0.1468672 525 11 0.2314010 390 11 0.0173160 305 8 0.044118 46 4 0.2276650 390 11 0.133204 593 11 0.371853 522 10 0.409611 471 12 0.3643307 452 10 0.320902 592 7 0.359190 367 10 0.4944368 0.4032784 0.415178 0.4731391 0.347224 0.5690617 0.4414797 0.4914483 0.4221133 0.4225226 0.573230 0.4299476 0.2036631 0.4232917 0.4042451 0.4427236 0.3851697 0.4170829 0.2335593 0.3051107 0.592643 0.4116615 0.619663 0.298657 0.436117 0.3742457 0.3815077 0.445767 0.4778749 0.3662278 0.3893677 0.533819 0.1484739 0.2146468 0.0390794 0.0810498 0.164534 0.0679504 0.402482 0.4060136 0.3272874 0.3183561 0.3946992 8 0.4282074 0.445964 -0.01898179 11 0.436534 0.370332 0.06620195 9.0767e-01 0.4734733 insignificant 1.0000e+00 1.0000 insignificant 9.3326e-01 0.572943 insignificant 1.0000e+00 1 insignificant 0.0099426 0.801872 insignificant 1 insignificant 0.4286260 0.1382837 0.2992959 11 0.528502 0.171814 0.3566882 1.1980e-25 1.00000000 hypermethylated 1.9967e-23 1.000000 hypermethylated 9.1970e-15 1.0000000 hypermethylated 2.2992e-12 1 hypermethylated 0.30624458 3.4640e-05 hypermethylated 3.1491e-03 hypermethylated 0.4282983 0.4076539 2.9947e-02 10 0.460349 0.376802 0.0835473 2.4911e-05 0.00367981 weaklyHypermeth 6.2277e-03 0.358420 weaklyHypermeth 2.0410e-05 0.1118612 weaklyHypermeth 5.1026e-03 1.00000 weaklyHypermeth 0.0744958 0.01897898 weaklyHypermeth 0.806154 insignificant 0.446264 0.138085 0.3202465 11 0.423236 0.172917 0.2503191 4.2901e-24 0.9999853 hypermethylated 1.4300e-21 1.00000 hypermethylated 1.8785e-13 0.9999695 hypermethylated 4.6961e-11 1 hypermethylated 0.2963020 4.8793e-05 hypermethylated 5.4215e-03 hypermethylated 0.446364 0.407654 0.0625269 10 0.455793 0.376802 0.0789911 2.6805e-04 0.09410084 weaklyHypermeth 4.4674e-02 1.00000 weaklyHypermeth 9.4669e-05 0.630118 weaklyHypermeth 4.7335e-02 1 weaklyHypermeth 0.06455317 0.0678775 insignificant 1.00000 insignificant 0.138146 0.4076539 -0.2534392 10 0.186218 0.376802 -0.1905834 0.999999 3.9162e-16 hypomethylated 1 9.7905e-14 hypomethylated 0.998713 1.1525e-06 hypomethylated 1 1.6464e-04 hypomethylated -0.2317488 8.1161e-04 hypomethylated 0.1014518 insignificant chr8 42878550 42879550 30072 HOOK3 ENSG00000168172 0.763526 247 9 0.770157 209 6 0.603042 114 6 0.688158 202 6 0.7736772 98 5 0.729219 323 9 0.6789760 88 3 0.6813402 134 6 0.7597250 76 5 0.7194456 103 7 0.7223986 195 6 0.5255556 61 3 0.8073737 113 5 0.686195 41 3 0.8405172 93 6 0.7375000 52 3 0.558298 260 4 0.6027326 304 8 0.810489 174 4 0.746164 235 9 0.717664 69 5 0.8280239 72 4 0.63521 120 7 0.857661 87 7 0.818456 140 5 0.718453 216 6 0.7214206 101 6 0.607143 48 2 0.7024337 171 5 0.808993 238 6 0.734887 227 9 0.7670098 264 9 0.6172278 190 6 0.6110498 112 6 0.8088450 123 5 0.763316 36 3 0.5370232 135 6 0.750807 224 6 0.809677 152 6 0.774781 194 8 0.7876852 166 6 0.766454 171 7 0.706007 183 6 0.7806682 0.6612368 0.688202 0.7837556 0.757595 0.7903239 0.7541031 0.7372130 0.7202295 0.7759407 0.726205 0.6774537 0.7449242 0.7113917 0.7702027 0.6842838 0.7212497 0.7016738 0.7765632 0.7913977 0.777303 0.6919876 0.724970 0.876923 0.755380 0.7033520 0.7618714 0.750138 0.6957061 0.7619571 0.6979238 0.774248 0.7172255 0.5325505 0.8058473 0.7662404 0.714020 0.6344061 0.794884 0.8040958 0.7780615 0.7956850 0.7629689 3 0.7717949 0.800342 -0.02033099 6 0.702722 0.737373 -0.03465066 8.3378e-01 0.0145345 weaklyHypometh 1.0000e+00 1.0000 insignificant 8.9611e-01 0.095716 insignificant 1.0000e+00 1 insignificant -0.0328883 0.268344 insignificant 1 insignificant 0.7717949 0.7512195 0.0143670 6 0.702722 0.657549 0.0451730 9.6480e-02 0.75304374 insignificant 1.0000e+00 1.000000 insignificant 2.8341e-01 0.7861827 insignificant 1.0000e+00 1 insignificant 0.02884651 5.6479e-01 insignificant 1.0000e+00 insignificant 0.7717949 0.8348730 -5.2398e-02 6 0.702722 0.766878 -0.0641562 9.9896e-01 0.01279075 weaklyHypometh 1.0000e+00 0.852717 insignificant 9.9009e-01 0.0403837 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.0586963 0.03712472 weaklyHypometh 1.000000 insignificant 0.800342 0.751220 0.0393537 6 0.737373 0.657549 0.0798236 4.1240e-03 0.9919820 weaklyHypermeth 8.4163e-02 1.00000 weaklyHypermeth 4.3576e-02 0.9381195 weaklyHypermeth 8.5443e-01 1 insignificant 0.0617348 2.4575e-01 insignificant 1.0000e+00 insignificant 0.800342 0.834873 -0.0324265 6 0.737373 0.766878 -0.0295056 9.3476e-01 0.12749274 insignificant 1.0000e+00 1.00000 insignificant 8.6679e-01 0.277886 insignificant 1.0000e+00 1 insignificant -0.02580796 0.3737621 insignificant 1.00000 insignificant 0.751220 0.8348730 -0.0686159 6 0.657549 0.766878 -0.1093292 0.999193 1.3980e-03 weaklyHypometh 1 3.4951e-02 weaklyHypometh 0.990086 7.0569e-03 weaklyHypometh 1 2.3293e-01 insignificant -0.0875428 1.0907e-01 insignificant 1.0000000 insignificant chr8 43249550 43250550 30077 HGSNAT ENSG00000165102 0.936601 259 10 0.827764 122 8 0.809289 178 10 0.940997 220 9 0.7675595 99 7 0.824537 328 10 0.9115657 135 9 0.8455300 222 10 0.7211691 168 10 0.9037135 276 10 0.8910476 244 10 0.8203463 94 8 0.7730066 238 10 0.939864 118 9 0.8289616 235 10 0.6079710 66 5 0.774361 56 3 0.8897987 210 9 0.779581 160 8 0.711246 210 10 0.678125 84 9 0.8457062 125 9 0.83494 163 10 0.725057 84 7 0.872507 98 6 0.944350 153 8 0.5899191 114 7 0.546181 98 9 0.8539975 162 8 0.853608 199 8 0.853241 173 8 0.9047469 283 10 0.4978333 171 8 0.6973472 126 10 0.4042303 187 7 0.523547 70 7 0.4305825 153 10 0.638131 134 8 0.892917 221 10 0.928257 231 10 0.8878699 229 9 0.915346 164 8 0.846973 227 9 0.9378398 0.9337675 0.824997 0.9419819 0.923402 0.9007536 0.9311893 0.9410303 0.8887490 0.8990918 0.872952 0.8830274 0.8010910 0.9330235 0.9032093 0.8126950 0.8448157 0.8630768 0.8731399 0.9049309 0.904272 0.8473069 0.930440 0.895213 0.901762 0.9258277 0.8528770 0.883555 0.8921875 0.8429821 0.9169400 0.908292 0.4824569 0.6502405 0.3794513 0.4607893 0.413664 0.7110394 0.867370 0.8935509 0.8774003 0.9031558 0.9158365 3 0.8833883 0.885549 0.00064645 9 0.703488 0.570579 0.13290838 3.0836e-01 0.6823976 insignificant 1.0000e+00 1.0000 insignificant 5.2968e-01 0.848371 insignificant 1.0000e+00 1 insignificant 0.0333807 0.431880 insignificant 1 insignificant 0.8834204 0.5243757 0.3738134 8 0.731265 0.497761 0.2335040 1.0904e-33 0.99999881 hypermethylated 2.7260e-31 1.000000 hypermethylated 2.1177e-11 0.9999987 hypermethylated 4.2354e-09 1 hypermethylated 0.29330033 7.6781e-04 hypermethylated 4.5165e-02 hypermethylated 0.8846578 0.8691589 5.2786e-03 10 0.826065 0.841527 -0.0154620 6.0126e-01 0.27903596 insignificant 1.0000e+00 1.000000 insignificant 6.6494e-01 0.5481966 insignificant 1.0000e+00 1.00000 insignificant -0.0690272 0.00933246 weaklyHypometh 0.583279 insignificant 0.886574 0.525000 0.3664808 8 0.604143 0.527042 0.0771012 1.6514e-19 0.9999563 hypermethylated 2.0643e-17 1.00000 hypermethylated 3.5807e-08 0.9993951 hypermethylated 3.9785e-06 1 hypermethylated 0.2599196 1.1281e-03 weaklyHypermeth 6.2675e-02 weaklyHypermeth 0.892379 0.869403 -0.0068829 9 0.800289 0.853717 -0.0534278 8.3092e-01 0.10529321 insignificant 1.0000e+00 1.00000 insignificant 9.6150e-01 0.301650 insignificant 1.0000e+00 1 insignificant -0.10240789 0.0208366 weaklyHypometh 1.00000 insignificant 0.527644 0.8691589 -0.3652834 8 0.579976 0.841527 -0.2615513 1.000000 7.3846e-13 hypomethylated 1 1.0549e-10 hypomethylated 1.000000 9.1628e-08 hypomethylated 1 1.8326e-05 hypomethylated -0.3623275 3.5410e-04 hypomethylated 0.0541126 hypomethylated chr8 48337850 48338850 30079 KIAA0146 ENSG00000164808 0.820586 135 5 0.777880 182 5 0.607226 67 5 0.660985 124 5 0.7715935 51 5 0.821940 295 5 0.6961039 52 5 0.7276958 119 5 0.6904762 46 5 0.7722728 52 5 0.4802103 194 6 0.9666667 13 1 0.7978022 80 5 0.671429 34 2 0.7723737 56 5 0.9000000 14 0 0.555556 9 0 0.7170833 135 5 0.840127 103 5 0.676852 191 5 0.616228 39 2 0.7794643 46 4 0.72379 67 5 0.757849 80 5 0.785714 56 4 0.819191 177 6 0.8921066 107 5 0.798611 32 1 0.8641304 116 5 0.819102 172 6 0.794304 217 5 0.8178128 224 5 0.7591733 103 5 0.5135829 80 5 0.6471735 103 4 0.444444 9 0 0.4708976 95 5 0.782381 170 6 0.770027 107 5 0.852868 110 5 0.6420635 91 5 0.622549 87 4 0.834410 136 5 0.8185913 0.7290135 0.509687 0.7948509 0.667829 0.7409936 0.6841631 0.7410052 0.6792328 0.7010323 0.779227 0.9537037 0.7963980 0.6521164 0.7642151 0.8888889 0.6734980 0.6942584 0.8417838 0.8010902 0.496345 0.9528770 0.647065 0.676375 0.809031 0.7275999 0.7759836 0.606771 0.8357488 0.7609257 0.8014793 0.735832 0.7260721 0.6088829 0.7769656 0.5976220 0.655422 0.7910714 0.788799 0.8217391 0.7868386 0.7646038 0.7956912 0 0.7920945 0.817568 -0.01067264 5 0.616633 0.811585 -0.19495175 9.9522e-01 0.2185724 insignificant 1.0000e+00 1.0000 insignificant 9.9253e-01 0.096544 insignificant 1.0000e+00 1 insignificant -0.0527825 0.115547 lowCoverage 1 lowCoverage 0.7916880 0.6642857 0.1278659 5 0.602744 0.563984 0.0387602 4.1586e-03 0.76063648 weaklyHypermeth 7.9973e-02 1.000000 weaklyHypermeth 9.2001e-02 0.9551722 insignificant 1.0000e+00 1 insignificant 0.13330078 8.1847e-02 lowCoverage 1.0000e+00 lowCoverage 0.7931924 0.7815443 -5.7926e-03 5 0.723752 0.702305 0.0214476 1.1926e-01 0.13842231 insignificant 1.0000e+00 1.000000 insignificant 5.0238e-01 0.1839987 insignificant 1.0000e+00 1.00000 insignificant -0.0081406 0.88526167 lowCoverage 1.000000 lowCoverage 0.817838 0.665474 0.1504404 5 0.814658 0.615256 0.1994030 8.9813e-03 0.9824838 weaklyHypermeth 1.6779e-01 1.00000 insignificant 4.7148e-03 0.9958249 weaklyHypermeth 1.4266e-01 1 insignificant 0.1860832 2.5679e-02 lowCoverage 8.5597e-01 lowCoverage 0.817901 0.784499 0.0068219 5 0.806239 0.819356 -0.0131166 4.8409e-01 0.43215234 insignificant 1.0000e+00 1.00000 insignificant 7.2787e-01 0.360810 insignificant 1.0000e+00 1 insignificant 0.04464182 0.4263720 lowCoverage 1.00000 lowCoverage 0.666667 0.7815443 -0.1554085 5 0.609687 0.702305 -0.0926175 0.999125 3.3354e-02 weaklyHypometh 1 5.5590e-01 insignificant 0.999997 7.6866e-03 weaklyHypometh 1 2.3293e-01 insignificant -0.1414414 9.9850e-02 lowCoverage 1.0000000 lowCoverage chr8 49393450 49394450 30101 ENSG00000210964 0.096908 506 6 0.044444 155 6 0.224561 103 6 0.023133 342 6 0.0491071 153 6 0.199221 487 6 0.0864151 233 6 0.0780722 251 6 0.0497716 134 6 0.0652778 68 6 0.2714217 355 6 0.1000000 45 6 0.1137500 127 6 0.108225 91 6 0.0238199 138 6 0.0845411 96 6 NA 0 0 0.2948310 681 6 0.030754 364 6 0.123342 510 6 0.213667 163 6 0.0000000 9 0 0.30337 163 6 0.027692 122 6 0.333333 20 1 0.130383 352 6 0.1177728 192 6 0.095767 95 6 0.0513488 388 6 0.066774 482 6 0.051827 415 6 0.1771036 432 6 0.0169591 259 6 0.0109375 245 6 0.0021097 739 6 0.000000 12 0 0.2583249 232 6 0.004386 400 6 0.051515 659 6 0.032262 279 6 0.0790042 419 6 0.045972 393 6 0.157786 418 6 0.0993873 0.0486226 0.074061 0.0284426 0.072166 0.0704213 0.0984313 0.0742945 0.0568472 0.0740358 0.137978 0.0884298 0.0877066 0.1149154 0.0241047 0.0753384 NA 0.0557900 0.0369020 0.1021442 0.081786 0.0000000 0.084093 0.025620 0.214876 0.1108288 0.0934484 0.144530 0.0686853 0.0596209 0.0554317 0.159703 0.0151370 0.0088585 0.0013600 0.0000000 0.014788 0.0028273 0.037752 0.0303342 0.0560774 0.0387227 0.0397162 6 0.0773366 0.088110 -0.01350999 6 0.125703 0.119566 0.00613657 9.8387e-01 0.5583438 insignificant 1.0000e+00 1.0000 insignificant 9.6955e-01 0.870097 insignificant 1.0000e+00 1 insignificant -0.0219327 0.550057 insignificant 1 insignificant 0.0775916 0.0079491 0.0692855 6 0.225703 0.254231 -0.0285284 3.3542e-08 0.99944061 weaklyHypermeth 1.1566e-06 1.000000 weaklyHypermeth 2.3233e-05 0.9998451 weaklyHypermeth 1.3666e-03 1 weaklyHypermeth 0.06003468 2.3205e-01 insignificant 1.0000e+00 insignificant 0.0773526 0.0479705 3.3187e-02 6 0.139670 0.146571 -0.0069013 6.3359e-03 0.96937741 weaklyHypermeth 6.0496e-01 1.000000 insignificant 1.4483e-01 0.6858889 insignificant 1.0000e+00 1.00000 insignificant 0.0355129 0.25062800 insignificant 1.000000 insignificant 0.088455 0.007427 0.0802183 6 0.149458 0.192789 -0.0433313 1.8704e-06 0.9665184 weaklyHypermeth 6.4496e-05 1.00000 weaklyHypermeth 8.0981e-05 0.9978241 weaklyHypermeth 5.0613e-03 1 weaklyHypermeth 0.0819674 1.4536e-01 insignificant 1.0000e+00 insignificant 0.088361 0.047970 0.0478557 6 0.132852 0.146571 -0.0137197 1.5577e-02 0.96855466 weaklyHypermeth 9.7354e-01 1.00000 insignificant 2.4922e-01 0.799801 insignificant 1.0000e+00 1 insignificant 0.05744563 0.1535334 insignificant 1.00000 insignificant 0.007427 0.0479926 -0.0344175 6 0.192789 0.164893 0.0278966 1.000000 4.5345e-07 weaklyHypometh 1 2.5585e-05 weaklyHypometh 0.999148 1.2164e-04 weaklyHypometh 1 8.6882e-03 weaklyHypometh -0.0245218 6.2133e-01 insignificant 1.0000000 insignificant chr8 49945450 49946450 30113 EFCAB1 ENSG00000034239 0.408511 1402 28 0.263081 1457 28 0.369227 645 26 0.241571 1208 26 0.3017958 742 26 0.345627 1835 28 0.2462034 794 24 0.2941851 830 28 0.2715294 1111 24 0.2999541 1128 25 0.3119384 930 28 0.1454715 656 22 0.2951566 978 28 0.341174 520 26 0.3482759 1142 28 0.1520623 429 22 0.048348 543 14 0.3449612 1571 26 0.310432 949 28 0.322428 1365 28 0.288775 442 26 0.4391417 636 16 0.26635 948 28 0.300090 709 28 0.362696 519 22 0.436182 1519 28 0.2639910 845 28 0.246605 535 22 0.3351394 985 28 0.323207 1874 28 0.295105 1800 28 0.3075667 1399 28 0.2335693 987 28 0.2514904 874 28 0.2138273 1193 22 0.052951 255 14 0.2240439 809 30 0.282870 1848 28 0.307729 2155 28 0.334799 1488 28 0.2627907 1429 26 0.333371 1297 26 0.344278 1497 26 0.1677218 0.0615281 0.184293 0.0771055 0.097135 0.1377040 0.0930125 0.0995591 0.0736317 0.0975631 0.100484 0.0851119 0.0815401 0.1015069 0.0944129 0.0904239 0.1027199 0.1001195 0.0793525 0.1185288 0.090804 0.1822723 0.114372 0.073782 0.131165 0.1959122 0.0765558 0.061387 0.0948677 0.0706175 0.0897564 0.139932 0.0386889 0.0324042 0.0436512 0.0828259 0.042793 0.0343925 0.144926 0.1297610 0.0939191 0.1185776 0.1076867 22 0.1984480 0.285235 -0.01315930 28 0.304061 0.336796 -0.03273500 9.9889e-01 0.3586667 insignificant 1.0000e+00 1.0000 insignificant 9.8819e-01 0.743766 insignificant 1.0000e+00 1 insignificant -0.0389740 0.148609 insignificant 1 insignificant 0.1983978 0.1977875 0.0861279 28 0.305926 0.265283 0.0406427 2.4619e-25 0.99930777 weaklyHypermeth 3.5170e-23 1.000000 weaklyHypermeth 5.3409e-17 0.9993069 weaklyHypermeth 1.7803e-14 1 weaklyHypermeth 0.07330458 8.7095e-02 insignificant 1.0000e+00 insignificant 0.1984272 0.1779812 -2.5414e-02 26 0.321437 0.300644 0.0207930 6.0972e-01 0.00094209 weaklyHypometh 1.0000e+00 0.134584 insignificant 9.6050e-01 0.0015740 weaklyHypometh 1.0000e+00 0.39349 insignificant -0.0334971 0.18098357 insignificant 1.000000 insignificant 0.285188 0.197653 0.0912626 28 0.346906 0.243674 0.1032317 5.6150e-20 0.9999677 weaklyHypermeth 9.3467e-18 1.00000 weaklyHypermeth 1.3254e-13 0.9996970 weaklyHypermeth 4.4179e-11 1 weaklyHypermeth 0.1122785 1.6971e-02 weaklyHypermeth 6.2856e-01 insignificant 0.285059 0.177981 -0.0136681 26 0.327115 0.300644 0.0264713 5.3786e-01 0.33321657 insignificant 1.0000e+00 1.00000 insignificant 9.5996e-01 0.089982 insignificant 1.0000e+00 1 insignificant 0.00547683 0.8180213 insignificant 1.00000 insignificant 0.197717 0.1780264 -0.1299731 26 0.234997 0.320040 -0.0850427 0.948021 1.5682e-31 weaklyHypometh 1 1.5682e-28 weaklyHypometh 0.999828 7.8309e-13 weaklyHypometh 1 7.8309e-10 weaklyHypometh -0.1068017 2.1506e-02 weaklyHypometh 0.6516976 insignificant chr8 53184150 53185150 30178 PCMTD1 ENSG00000168300 0.848205 350 10 0.769959 286 12 0.719935 210 10 0.863508 235 10 0.7678872 145 12 0.850424 439 12 0.7219163 203 10 0.8346216 227 12 0.7748325 162 12 0.8292379 181 12 0.8416005 386 12 0.7603632 102 7 0.9123978 236 12 0.700000 23 4 0.8581368 151 10 0.7761544 102 7 0.925201 94 5 0.8368108 253 12 0.779959 160 9 0.892448 421 12 0.925514 94 8 0.8326974 117 7 0.85930 180 10 0.768617 140 12 0.878030 86 6 0.811122 279 12 0.8250655 133 10 0.870271 76 7 0.8408801 167 11 0.894544 316 12 0.813477 237 12 0.7909314 523 12 0.6492435 316 12 0.7226373 194 12 0.6964847 256 7 0.471429 23 1 0.6830173 138 9 0.483743 345 12 0.825784 323 12 0.841854 343 12 0.8226802 252 10 0.893556 253 9 0.860189 306 11 0.8511841 0.8192471 0.705881 0.8617309 0.819785 0.8495020 0.8100887 0.8367374 0.7560715 0.9031179 0.868026 0.8025376 0.9004376 0.8079274 0.8629411 0.8433466 0.8582715 0.7883929 0.7985058 0.8920056 0.894477 0.8692929 0.880589 0.845701 0.837922 0.8902316 0.7980641 0.863857 0.7886994 0.8885078 0.8242580 0.870267 0.7311210 0.7553725 0.6415771 0.5309327 0.714789 0.5647668 0.828915 0.8691061 0.8397583 0.8488909 0.8628645 4 0.8497481 0.876065 -0.02764949 12 0.779080 0.815070 -0.03598949 9.9962e-01 0.0157577 weaklyHypometh 1.0000e+00 1.0000 insignificant 9.9878e-01 0.082812 insignificant 1.0000e+00 1 insignificant -0.0293575 0.140300 insignificant 1 insignificant 0.8497481 0.6375786 0.2029332 12 0.779080 0.579761 0.1993190 3.4500e-15 0.99999998 hypermethylated 2.1563e-13 1.000000 hypermethylated 2.7907e-07 0.9999988 hypermethylated 2.5370e-05 1 hypermethylated 0.19542087 6.2470e-03 weaklyHypermeth 2.8395e-01 insignificant 0.8497481 0.9045362 -3.2149e-02 11 0.779080 0.790344 -0.0112641 5.5095e-01 0.00492246 weaklyHypometh 1.0000e+00 0.378651 insignificant 7.3225e-01 0.0070247 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.0356327 0.08603540 insignificant 1.000000 insignificant 0.876065 0.637579 0.2220410 12 0.815070 0.579761 0.2353085 9.6018e-15 1.0000000 hypermethylated 8.0015e-13 1.00000 hypermethylated 1.4423e-08 0.9999995 hypermethylated 1.8029e-06 1 hypermethylated 0.2247784 3.3675e-03 weaklyHypermeth 1.6036e-01 insignificant 0.876065 0.904536 -0.0029214 11 0.815070 0.790344 0.0247254 1.4610e-01 0.23098330 insignificant 1.0000e+00 1.00000 insignificant 3.0569e-01 0.246767 insignificant 1.0000e+00 1 insignificant -0.00627523 0.7390242 insignificant 1.00000 insignificant 0.637579 0.9045362 -0.2558814 11 0.579761 0.790344 -0.2105831 0.999940 6.6790e-08 hypomethylated 1 5.1377e-06 hypomethylated 0.999999 3.7211e-07 hypomethylated 1 6.2019e-05 hypomethylated -0.2310536 2.9902e-03 weaklyHypometh 0.2579554 insignificant chr8 54589150 54590150 30207 OPRK1 ENSG00000082556 0.984188 120 3 0.742857 43 3 0.511111 33 3 0.920479 153 5 0.9600000 19 3 0.806818 144 5 0.8000000 15 3 0.8060192 80 5 0.6111111 37 3 1.0000000 14 0 0.8938827 108 5 0.6666667 6 0 0.8222222 32 3 0.960000 17 3 0.8833333 18 0 0.8000000 9 0 NA 0 0 0.8627320 150 3 0.741667 71 5 0.913228 89 4 1.000000 10 0 0.8000000 21 3 0.88649 46 5 0.933333 21 2 0.688420 175 5 0.962500 112 5 0.8636364 43 4 0.000000 3 0 0.9216475 96 3 0.972000 149 3 0.976471 112 5 0.9436977 127 5 0.9133333 82 5 0.9428571 121 5 1.0000000 45 3 0.747059 124 5 0.8761905 33 4 0.682471 158 5 0.698333 83 5 0.907692 127 5 0.9055556 112 3 0.887739 89 3 0.870000 68 3 0.9728426 0.8986175 0.616487 0.9392169 0.929032 0.9442815 0.7935484 0.8367971 0.5197133 1.0000000 0.884268 0.6451613 0.8064516 0.9290323 0.9112903 0.6451613 NA 0.7662660 0.8096774 0.8508278 1.000000 0.6516129 0.906158 0.881720 0.791778 0.9364919 0.7243402 0.000000 0.8418984 0.9503226 0.9582543 0.905881 0.9645161 0.9013825 1.0000000 0.5597723 1.000000 0.6947564 0.751344 0.8420182 0.8351254 0.8881350 0.7790323 0 0.8678756 0.899454 -0.02891207 3 0.693078 0.765538 -0.07245981 9.9564e-01 0.0770070 lowCoverage 1.0000e+00 1.0000 lowCoverage 9.5839e-01 0.182074 lowCoverage 1.0000e+00 1 lowCoverage -0.0034211 0.968422 lowCoverage 1 lowCoverage 0.8692641 0.8010657 0.0658654 3 0.870309 0.806358 0.0639516 1.2005e-01 0.68354183 lowCoverage 1.0000e+00 1.000000 lowCoverage 7.3656e-01 0.5476989 lowCoverage 1.0000e+00 1 lowCoverage -0.03472290 5.6346e-01 lowCoverage 1.0000e+00 lowCoverage 0.8692641 0.8350731 3.0351e-02 3 0.870309 0.849329 0.0209806 4.4538e-01 0.84992756 lowCoverage 1.0000e+00 1.000000 lowCoverage 3.5122e-01 0.8646542 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.0282686 0.58136994 lowCoverage 1.000000 lowCoverage 0.901099 0.801066 0.1011880 5 0.921753 0.806358 0.1153953 2.7301e-03 0.9122225 weaklyHypermeth 5.6878e-02 1.00000 weaklyHypermeth 1.8269e-01 0.4861286 insignificant 1.0000e+00 1 insignificant -0.0313018 7.4271e-01 lowCoverage 1.0000e+00 lowCoverage 0.901099 0.835073 0.0594264 3 0.921753 0.849329 0.0724243 2.6912e-02 0.98327373 lowCoverage 1.0000e+00 1.00000 lowCoverage 3.0318e-01 0.970540 lowCoverage 1.0000e+00 1 lowCoverage -0.02484752 0.7834382 lowCoverage 1.00000 lowCoverage 0.801066 0.8350731 -0.0357101 3 0.806358 0.849329 -0.0429710 0.506845 4.5915e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.275325 8.8393e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.0064543 9.2118e-01 lowCoverage 1.0000000 lowCoverage chr8 55227050 55228050 30219 MRPL15 ENSG00000137547 0.712867 93 7 0.663615 118 6 0.794898 43 7 0.639456 55 5 0.7250000 39 5 0.665955 91 5 0.7619048 42 3 0.7945501 103 7 0.7787879 36 5 0.6785714 26 3 0.5966531 165 7 0.7400000 19 2 0.7129231 91 7 0.828571 35 6 0.8389456 48 5 0.6250000 18 2 1.000000 5 0 0.8862434 86 5 0.681071 130 5 0.721607 78 5 0.600000 26 1 0.9000000 6 1 0.79545 44 3 0.627143 35 3 0.761905 17 0 0.826984 90 5 0.8440476 47 3 0.708333 30 3 0.6162732 136 5 0.758634 112 7 0.627268 116 5 0.6544218 78 5 0.7362087 100 7 0.7789116 61 5 0.7885900 118 7 0.666667 10 0 0.4219008 72 5 0.745603 115 7 0.851616 78 5 0.839796 97 7 0.8238095 78 5 0.785714 38 3 0.815898 88 3 0.7837882 0.7080413 0.836310 0.7504579 0.682692 0.7275849 0.8108974 0.8130880 0.8326923 0.6002747 0.743948 0.7928347 0.7273401 0.8692308 0.8588599 0.7115385 0.8798436 0.8811966 0.7644838 0.7866468 0.752400 0.7614739 0.769231 0.657509 0.820513 0.8314103 0.7868548 0.661119 0.8396398 0.8056720 0.7885779 0.735989 0.7657680 0.8200549 0.7700549 0.8559665 0.681381 0.8336596 0.886046 0.8798077 0.8466117 0.8608059 0.8589670 0 0.7744133 0.800543 -0.01005503 5 0.806544 0.668351 0.13819292 5.5152e-01 0.8940103 insignificant 1.0000e+00 1.0000 insignificant 8.1563e-01 0.956713 insignificant 1.0000e+00 1 insignificant 0.0156256 0.673337 lowCoverage 1 lowCoverage 0.7742424 0.7600000 0.0191340 5 0.788957 0.573831 0.2151266 1.9085e-01 0.90825533 insignificant 1.0000e+00 1.000000 insignificant 2.7758e-01 0.9158957 insignificant 1.0000e+00 1 insignificant 0.05268414 4.1379e-01 lowCoverage 1.0000e+00 lowCoverage 0.7750760 0.8469657 -6.7983e-02 5 0.817853 0.781427 0.0364257 9.9999e-01 0.05166019 insignificant 1.0000e+00 1.000000 insignificant 9.9965e-01 0.1955861 insignificant 1.0000e+00 1.00000 insignificant -0.0810358 0.00305792 lowCoverage 0.318005 lowCoverage 0.802183 0.760000 0.0448795 5 0.683656 0.573831 0.1098253 4.4673e-02 0.6827939 weaklyHypermeth 7.2054e-01 1.00000 insignificant 2.5024e-01 0.8261302 insignificant 1.0000e+00 1 insignificant 0.0370585 5.7639e-01 lowCoverage 1.0000e+00 lowCoverage 0.804677 0.846966 -0.0568556 5 0.702022 0.781427 -0.0794058 9.8419e-01 0.04793616 weaklyHypometh 1.0000e+00 1.00000 insignificant 9.9663e-01 0.149873 insignificant 1.0000e+00 1 insignificant -0.09666139 0.0085928 lowCoverage 1.00000 lowCoverage 0.763214 0.8469657 -0.0901405 5 0.631214 0.781427 -0.1502136 0.998736 4.2510e-02 weaklyHypometh 1 6.7476e-01 insignificant 0.997739 9.9116e-02 insignificant 1 1.0000e+00 insignificant -0.1337199 6.3676e-02 lowCoverage 1.0000000 lowCoverage chr8 55456550 55457550 30228 RNU105C ENSG00000199212 0.255458 353 12 0.352308 417 12 0.278909 331 12 0.275211 314 10 0.3365717 234 12 0.386492 594 12 0.3691417 334 12 0.3753619 257 12 0.3921940 368 12 0.3283408 287 12 0.4791317 389 12 0.4603575 214 12 0.2823466 429 12 0.271667 144 10 0.2218593 336 10 0.3048609 130 10 0.297407 125 9 0.2918446 452 11 0.478311 240 12 0.186750 445 12 0.303883 154 12 0.0473005 268 7 0.32592 322 12 0.159568 253 12 0.302397 147 6 0.252093 528 12 0.1847239 343 12 0.274888 194 11 0.2230600 286 12 0.080836 579 12 0.261267 481 12 0.3785084 575 12 0.0080267 413 12 0.0013441 285 12 0.0031557 554 12 0.125560 113 8 0.1346495 320 12 0.050037 520 12 0.090325 680 14 0.180077 420 12 0.1751923 420 10 0.190758 270 7 0.079344 423 11 0.2148161 0.2058258 0.230338 0.2133124 0.225923 0.2794705 0.2606700 0.2641154 0.2903176 0.1948744 0.352379 0.3307007 0.1213364 0.2055257 0.1107541 0.1780442 0.1900699 0.2001983 0.4667968 0.1627906 0.246347 0.0679853 0.244079 0.139094 0.170327 0.1265234 0.1180668 0.243539 0.1561782 0.0463608 0.1393588 0.279136 0.0011813 0.0042134 0.0032963 0.0639010 0.067856 0.0263424 0.061011 0.1197512 0.0540202 0.1288031 0.0656771 7 0.2990771 0.210220 0.09672306 12 0.307797 0.193707 0.11408961 3.9611e-12 1.0000000 weaklyHypermeth 3.9611e-09 1.0000 weaklyHypermeth 1.9538e-08 1.000000 weaklyHypermeth 1.9538e-05 1 weaklyHypermeth 0.0983557 0.008833 weaklyHypermeth 1 insignificant 0.2995139 0.0349206 0.2733449 12 0.351412 0.038239 0.3131733 1.2457e-47 1.00000000 hypermethylated 6.2287e-45 1.000000 hypermethylated 3.6597e-25 1.0000000 hypermethylated 3.6597e-22 1 hypermethylated 0.27743075 2.7112e-06 hypermethylated 3.0124e-04 hypermethylated 0.2989981 0.0849526 1.7707e-01 11 0.301211 0.113708 0.1875024 2.7151e-21 1.00000000 weaklyHypermeth 2.7151e-18 1.000000 weaklyHypermeth 2.0260e-11 1.0000000 weaklyHypermeth 2.0260e-08 1.00000 weaklyHypermeth 0.1880871 0.00013381 weaklyHypermeth 0.033452 weaklyHypermeth 0.212018 0.034921 0.1847946 12 0.242134 0.038239 0.2038947 6.5427e-20 1.0000000 weaklyHypermeth 9.3467e-18 1.00000 weaklyHypermeth 7.5801e-15 1.0000000 weaklyHypermeth 3.7900e-12 1 weaklyHypermeth 0.1790751 2.9260e-04 weaklyHypermeth 2.4383e-02 weaklyHypermeth 0.210424 0.084953 0.0858950 11 0.207543 0.113708 0.0938350 2.1848e-04 0.99999982 weaklyHypermeth 4.3695e-02 1.00000 weaklyHypermeth 8.5517e-04 0.999990 weaklyHypermeth 2.1379e-01 1 insignificant 0.08973141 0.0312482 weaklyHypermeth 1.00000 insignificant 0.034921 0.0857273 -0.0740524 11 0.038239 0.132660 -0.0944205 1.000000 4.6052e-07 weaklyHypometh 1 2.5585e-05 weaklyHypometh 1.000000 3.8114e-06 weaklyHypometh 1 4.7643e-04 weaklyHypometh -0.0893436 3.0510e-02 weaklyHypometh 0.7822954 insignificant chr8 56920550 56921550 30240 ENSG00000211045 0.619054 244 6 0.598391 90 6 0.633936 140 7 0.566862 209 5 0.7047619 79 6 0.623504 126 3 0.6446759 73 5 0.7514286 61 6 0.5809524 41 5 0.6913919 38 2 0.7290043 102 6 0.6867003 43 5 0.5631398 92 6 0.480952 73 5 0.5363677 86 6 0.4023810 32 4 0.666667 3 0 0.6477849 164 7 0.708594 76 3 0.521138 62 2 0.500000 16 1 0.7592593 16 1 0.68701 165 7 0.762698 63 5 0.907407 21 1 0.827513 140 6 0.6049020 48 6 0.644444 51 5 0.7040164 99 6 0.472728 87 3 0.837662 106 3 0.6420697 106 3 0.5188773 104 6 0.7681373 75 5 0.5625000 92 5 0.800000 13 0 0.6120205 132 6 0.471157 144 3 0.652530 197 7 0.750974 214 6 0.6425183 151 5 0.577099 188 6 0.764563 190 6 0.6711616 0.7640694 0.600965 0.6683909 0.660994 0.6114767 0.6147202 0.7079518 0.6534137 0.6606426 0.695947 0.6842400 0.6622962 0.5671256 0.6059685 0.3935743 0.6844769 0.6470115 0.6316416 0.6553825 0.618961 0.9009997 0.705945 0.733266 0.886212 0.8035029 0.5927475 0.681928 0.6818703 0.6535273 0.7936291 0.642068 0.6050160 0.7413182 0.6548193 0.9230608 0.612689 0.4999716 0.702569 0.6801185 0.6122974 0.6419536 0.7265969 1 0.6733915 0.776688 -0.05082814 6 0.596806 0.587685 0.00912052 9.0639e-01 0.0054999 weaklyHypometh 1.0000e+00 0.7857 insignificant 9.0379e-01 0.032293 weaklyHypometh 1.0000e+00 1 insignificant -0.0779251 0.087933 lowCoverage 1 lowCoverage 0.6746856 0.6482143 0.0539967 6 0.646407 0.615961 0.0304454 2.0029e-02 0.12491989 weaklyHypermeth 3.4187e-01 1.000000 insignificant 2.5391e-01 0.2784158 insignificant 1.0000e+00 1 insignificant -0.00423093 9.4434e-01 lowCoverage 1.0000e+00 lowCoverage 0.6732348 0.6521277 -2.0051e-02 6 0.582121 0.703000 -0.1208790 9.3525e-01 0.07585497 insignificant 1.0000e+00 1.000000 insignificant 9.5378e-01 0.2409912 insignificant 1.0000e+00 1.00000 insignificant -0.0596525 0.18531162 lowCoverage 1.000000 lowCoverage 0.778993 0.648214 0.1033883 6 0.629896 0.615961 0.0139348 6.0364e-03 0.9940745 weaklyHypermeth 1.2073e-01 1.00000 insignificant 1.6305e-01 0.9587198 insignificant 1.0000e+00 1 insignificant 0.0736942 2.9587e-01 lowCoverage 1.0000e+00 lowCoverage 0.778384 0.652128 0.0418083 6 0.661146 0.703000 -0.0418539 2.4758e-01 0.80138666 insignificant 1.0000e+00 1.00000 insignificant 2.0304e-01 0.910072 insignificant 1.0000e+00 1 insignificant 0.01827268 0.7311868 lowCoverage 1.00000 lowCoverage 0.647585 0.6513859 -0.0739335 6 0.561099 0.660571 -0.0994728 0.765207 9.0845e-02 insignificant 1 1.0000e+00 insignificant 0.449561 1.6278e-01 insignificant 1 1.0000e+00 insignificant -0.0554215 4.1915e-01 lowCoverage 1.0000000 lowCoverage chr8 57014750 57015750 30253 ENSG00000209053 0.674194 234 8 0.685100 226 9 0.607181 142 9 0.675723 238 8 0.6841460 173 11 0.747774 201 8 0.6844822 241 13 0.7941311 131 8 0.5961372 138 7 0.6494918 120 4 0.6569531 312 13 0.5078348 115 2 0.6581828 130 8 0.658550 56 6 0.5775747 133 9 0.5578455 156 3 0.286293 110 4 0.6311747 330 9 0.704634 153 9 0.560655 131 6 0.617063 54 4 0.4285714 16 0 0.61541 120 8 0.715600 78 7 0.693768 145 4 0.672778 262 13 0.6590193 95 10 0.462554 44 6 0.5648880 192 8 0.761292 253 13 0.733021 244 11 0.4485750 146 9 0.6135375 166 8 0.6469749 177 6 0.5878205 195 13 0.525000 87 4 0.6149361 140 8 0.575417 258 11 0.707275 220 6 0.625265 215 9 0.6729768 225 6 0.683194 195 8 0.696528 188 7 0.6617255 0.6187189 0.631674 0.6879697 0.650050 0.7280312 0.7104681 0.7566294 0.6128871 0.7251834 0.608998 0.3751187 0.6577922 0.6854756 0.6751846 0.6720950 0.6239449 0.6362609 0.6559981 0.6277867 0.628443 0.5731196 0.643037 0.708150 0.615382 0.6605413 0.5452592 0.532838 0.5882740 0.7459008 0.7035516 0.669075 0.4887883 0.5904846 0.4223647 0.5200206 0.620215 0.5519541 0.701486 0.6335301 0.7106815 0.7829505 0.6455840 1 0.6063401 0.685264 -0.00820741 7 0.691117 0.696200 -0.00508266 4.5535e-01 0.5371609 insignificant 1.0000e+00 1.0000 insignificant 5.2330e-01 0.961975 insignificant 1.0000e+00 1 insignificant 0.0155248 0.706128 insignificant 1 insignificant 0.6064815 0.4662757 0.1985692 7 0.675415 0.570664 0.1047515 2.7650e-13 0.97012856 weaklyHypermeth 1.6265e-11 1.000000 weaklyHypermeth 4.7827e-05 0.8939236 weaklyHypermeth 2.3913e-03 1 weaklyHypermeth 0.03595528 2.2915e-01 insignificant 1.0000e+00 insignificant 0.6061130 0.7574305 -1.4193e-02 7 0.654778 0.686230 -0.0314514 2.7168e-01 0.00014170 weaklyHypometh 1.0000e+00 0.070848 weaklyHypometh 4.6144e-01 0.0555307 insignificant 1.0000e+00 1.00000 insignificant -0.0471447 0.10002821 insignificant 1.000000 insignificant 0.685332 0.466276 0.2118461 10 0.681853 0.570664 0.1111896 5.8783e-07 0.9523679 hypermethylated 2.3513e-05 1.00000 hypermethylated 1.3342e-02 0.8840517 weaklyHypermeth 3.1766e-01 1 insignificant 0.0204305 5.9188e-01 insignificant 1.0000e+00 insignificant 0.684882 0.757430 -0.0254487 5 0.660459 0.686230 -0.0257707 8.0750e-01 0.08039881 insignificant 1.0000e+00 1.00000 insignificant 9.2313e-01 0.086831 insignificant 1.0000e+00 1 insignificant -0.06266956 0.1040837 insignificant 1.00000 insignificant 0.466276 0.7574591 -0.2384312 5 0.570664 0.677727 -0.1070631 0.791463 5.4837e-06 hypomethylated 1 2.6123e-04 hypomethylated 0.687146 4.2079e-03 weaklyHypometh 1 1.6184e-01 insignificant -0.0831000 4.6729e-03 weaklyHypometh 0.2920556 insignificant chr8 58639450 58640450 30279 ENSG00000202265 0.941539 304 5 0.875529 95 3 0.894902 65 5 0.944760 268 5 1.0000000 33 3 0.969517 337 5 0.8347070 55 5 0.8708791 106 5 0.8525143 117 5 0.9368316 115 5 0.9923077 81 3 0.7333333 64 5 0.9109804 159 5 0.956522 73 3 0.9129916 148 5 0.9333333 17 0 1.000000 38 3 0.8670223 379 5 0.850000 46 3 0.989583 162 3 1.000000 25 5 0.9675676 121 5 0.93169 115 5 0.933333 61 3 0.900000 82 5 0.952627 96 5 0.9309854 112 5 0.861667 63 5 0.9466667 67 5 0.952949 148 5 0.943875 100 5 0.9347477 223 5 0.6383335 110 5 0.6925134 55 3 0.8825701 400 5 0.828571 42 3 0.7765801 61 5 0.483766 97 5 0.946439 297 5 0.981818 170 3 0.9655728 350 5 0.990476 284 5 0.903758 307 5 0.9471473 0.8739466 0.936025 0.9631472 1.000000 0.9493774 0.8483592 0.9127056 0.9259235 0.9247383 0.987255 0.8875740 0.9730827 0.9277077 0.9108535 1.0000000 1.0000000 0.9059449 1.0000000 0.9892751 1.000000 0.9443467 0.928194 0.934911 1.000000 0.9763314 0.9555528 0.811440 0.9771203 0.9662343 0.9599222 0.966675 0.7796095 0.6844603 0.7995689 0.7058326 0.839797 0.7278107 0.981309 0.9819258 0.9791134 1.0000000 0.9801847 3 0.9290008 0.942292 -0.01778095 5 0.911479 0.934471 -0.02299155 9.7078e-01 0.1091364 insignificant 1.0000e+00 1.0000 insignificant 9.9193e-01 0.054428 insignificant 1.0000e+00 1 insignificant -0.0246463 0.181588 lowCoverage 1 lowCoverage 0.9290008 0.7385621 0.1924525 5 0.911479 0.678848 0.2326315 5.3393e-12 0.98781486 weaklyHypermeth 2.8101e-10 1.000000 weaklyHypermeth 2.7792e-03 0.9502110 weaklyHypermeth 8.1740e-02 1 weaklyHypermeth 0.19630690 1.9617e-02 lowCoverage 6.9923e-01 lowCoverage 0.9290008 0.9694602 -4.1683e-02 5 0.911479 0.948849 -0.0373700 9.9782e-01 0.00321910 weaklyHypometh 1.0000e+00 0.357678 insignificant 9.9044e-01 0.0326497 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.0442501 0.06137291 lowCoverage 1.000000 lowCoverage 0.942292 0.738562 0.2181103 5 0.934471 0.678848 0.2556230 1.0865e-09 0.9966665 hypermethylated 6.0360e-08 1.00000 hypermethylated 2.4490e-03 0.9962657 weaklyHypermeth 8.7463e-02 1 weaklyHypermeth 0.2209532 1.2824e-02 lowCoverage 4.9323e-01 lowCoverage 0.942292 0.969460 -0.0226265 5 0.934471 0.948849 -0.0143784 9.0820e-01 0.11748252 insignificant 1.0000e+00 1.00000 insignificant 7.8884e-01 0.315280 insignificant 1.0000e+00 1 insignificant -0.01960386 0.3167219 lowCoverage 1.00000 lowCoverage 0.738562 0.9694602 -0.2344323 5 0.678848 0.948849 -0.2700015 0.999918 6.6764e-06 hypomethylated 1 2.9028e-04 hypomethylated 0.990152 2.1787e-02 weaklyHypometh 1 4.7362e-01 insignificant -0.2405570 8.5128e-03 lowCoverage 0.4729332 lowCoverage chr8 59882550 59883550 30321 ENSG00000211109 0.115402 353 8 0.063635 210 8 0.051365 266 8 0.081315 319 7 0.0895833 154 8 0.139273 346 8 0.0547928 251 8 0.0491769 255 8 0.0895423 167 8 0.0845377 261 8 0.0819409 288 8 0.0780699 151 8 0.0194231 208 8 NA 0 0 0.0748743 233 8 0.0724156 175 8 0.025987 155 8 0.0619190 287 7 0.043927 195 8 0.084293 316 7 0.062500 61 6 0.0324324 140 5 0.12160 243 8 0.082071 150 8 0.054945 89 5 0.064697 434 8 0.0914855 141 8 0.057692 57 6 0.1000424 193 8 0.063872 387 8 0.100056 321 8 0.0993310 388 8 0.0065789 325 8 0.0502570 135 8 0.0000000 55 3 0.000000 29 3 0.0065789 78 8 0.013262 377 8 0.061981 467 7 0.055447 295 7 0.0568018 268 6 0.056350 297 6 0.153436 287 7 0.1207503 0.0868233 0.071027 0.1147088 0.111675 0.1613903 0.0725053 0.0662556 0.1312233 0.1078807 0.118688 0.1060843 0.0219373 NA 0.0952058 0.0947480 0.0298600 0.0733474 0.0498340 0.1182623 0.089226 0.0323620 0.145423 0.099480 0.065514 0.0876784 0.1001074 0.082362 0.1416061 0.0833569 0.1112953 0.113085 0.0065568 0.0595967 0.0000000 0.0012139 0.014708 0.0196874 0.072166 0.0802338 0.0789068 0.0793532 0.1203325 5 0.1087620 0.112519 0.00181175 8 0.080021 0.079885 0.00013548 4.9698e-01 0.3653955 insignificant 1.0000e+00 1.0000 insignificant 4.5330e-01 0.587311 insignificant 1.0000e+00 1 insignificant -0.0059041 0.554317 insignificant 1 insignificant 0.1087620 0.0180180 0.1092966 8 0.080021 0.014324 0.0656963 2.7453e-06 0.98514855 weaklyHypermeth 7.6259e-05 1.000000 weaklyHypermeth 8.2247e-05 0.9986906 weaklyHypermeth 3.9165e-03 1 weaklyHypermeth 0.05887694 6.5230e-05 weaklyHypermeth 5.4358e-03 weaklyHypermeth 0.1087620 0.1164808 2.2000e-02 7 0.080021 0.077632 0.0023888 4.9427e-02 0.70712054 weaklyHypermeth 1.0000e+00 1.000000 insignificant 1.0443e-01 0.9422468 insignificant 1.0000e+00 1.00000 insignificant -0.0051468 0.80980166 insignificant 1.000000 insignificant 0.112519 0.018018 0.1080156 8 0.079885 0.014324 0.0655608 2.7749e-06 0.9078928 weaklyHypermeth 8.9512e-05 1.00000 weaklyHypermeth 7.6376e-04 0.9616790 weaklyHypermeth 3.0551e-02 1 weaklyHypermeth 0.0647810 3.8292e-05 weaklyHypermeth 4.7865e-03 weaklyHypermeth 0.112519 0.116481 0.0193093 7 0.079885 0.077632 0.0022534 1.2050e-01 0.86453399 insignificant 1.0000e+00 1.00000 insignificant 2.3039e-01 0.967640 insignificant 1.0000e+00 1 insignificant 0.00075731 0.9719795 insignificant 1.00000 insignificant 0.018018 0.1164808 -0.0960920 7 0.014324 0.077632 -0.0633074 0.718725 9.5884e-07 weaklyHypometh 1 5.0465e-05 weaklyHypometh 0.884302 1.5702e-02 weaklyHypometh 1 4.1238e-01 insignificant -0.0640237 2.5058e-02 weaklyHypometh 0.6960683 insignificant chr8 61650350 61651350 30368 RAB2A ENSG00000104388 0.746168 176 6 0.647265 95 6 0.603430 100 6 0.688594 92 4 0.7637862 69 6 0.652707 183 6 0.7387607 86 6 0.6820988 82 4 0.6247886 82 6 0.6827094 60 4 0.7105769 124 6 0.4141839 59 4 0.6582420 110 6 0.690476 22 3 0.7079133 90 6 0.6000000 42 4 0.701154 211 6 0.5423977 99 4 0.625126 108 6 0.756384 149 5 0.647970 41 4 0.6893939 38 3 0.55322 90 4 0.726190 38 3 0.761869 48 5 0.720403 148 6 0.7028509 55 6 0.660354 32 2 0.6891534 45 4 0.727304 123 6 0.689243 134 6 0.8576018 194 4 0.6130587 96 6 0.6268561 86 6 0.6371010 112 6 0.585354 36 2 0.6243326 52 6 0.559115 121 6 0.745346 141 6 0.684064 159 6 0.6709185 118 6 0.821078 103 4 0.659295 122 7 0.7485221 0.6808774 0.562127 0.7832410 0.754899 0.7835912 0.7585773 0.7213937 0.6534510 0.6693454 0.786489 0.6139645 0.7287184 0.7327794 0.7157174 0.6868132 0.7505697 0.6616128 0.6475191 0.7872984 0.642505 0.7799700 0.683129 0.815018 0.769730 0.7092545 0.7061885 0.674825 0.6897785 0.7392591 0.7229923 0.794384 0.6508589 0.6066234 0.6376847 0.6757409 0.664035 0.6343022 0.744909 0.7097828 0.7480428 0.7860375 0.6926061 4 0.7074129 0.732252 -0.01870031 4 0.672006 0.731720 -0.05971399 9.1510e-01 0.0412229 lowCoverage 1.0000e+00 1.0000 lowCoverage 8.6147e-01 0.042045 lowCoverage 1.0000e+00 1 lowCoverage -0.0402911 0.156596 lowCoverage 1 lowCoverage 0.7074129 0.6401590 0.0700611 6 0.672006 0.654882 0.0171237 1.3205e-02 0.97474409 weaklyHypermeth 2.3581e-01 1.000000 insignificant 6.7747e-02 0.9285484 insignificant 1.0000e+00 1 insignificant 0.05420196 2.1264e-02 weaklyHypermeth 6.9923e-01 insignificant 0.7074129 0.7262830 -1.3566e-02 6 0.672006 0.698485 -0.0264785 7.5920e-01 0.39888560 insignificant 1.0000e+00 1.000000 insignificant 8.0558e-01 0.3142740 insignificant 1.0000e+00 1.00000 insignificant -0.0543023 0.16566284 insignificant 1.000000 insignificant 0.732252 0.640159 0.0856919 4 0.731720 0.654882 0.0768377 2.2117e-04 0.9999466 lowCoverage 5.5292e-03 1.00000 lowCoverage 1.8617e-02 0.9994195 lowCoverage 4.2096e-01 1 lowCoverage 0.0944931 1.2063e-03 lowCoverage 6.3492e-02 lowCoverage 0.732252 0.726283 0.0054984 4 0.731720 0.698485 0.0332355 1.2792e-01 0.93428178 lowCoverage 1.0000e+00 1.00000 lowCoverage 3.9142e-01 0.943147 lowCoverage 1.0000e+00 1 lowCoverage -0.01401112 0.7116004 lowCoverage 1.00000 lowCoverage 0.640159 0.7262830 -0.0777707 6 0.654882 0.698485 -0.0436022 0.961777 1.2945e-02 weaklyHypometh 1 2.4894e-01 insignificant 0.992157 1.1141e-01 insignificant 1 1.0000e+00 insignificant -0.1085042 1.8890e-02 weaklyHypometh 0.6387910 insignificant chr8 62847550 62848550 30408 ASPH ENSG00000198363 0.733040 113 7 0.622332 162 7 0.592687 56 7 0.672299 126 7 0.5059524 54 7 0.731925 104 7 0.6760204 51 6 0.7155749 99 7 0.4696970 30 1 0.6111111 26 1 0.6197526 162 7 0.6428571 16 0 0.7008117 78 7 0.694139 30 1 0.6016234 61 7 0.4040816 37 6 0.714286 7 0 0.6634795 138 7 0.671939 78 7 0.578453 70 7 0.462500 18 2 0.6666667 5 0 0.79589 46 3 0.641234 40 3 0.668350 36 3 0.654620 90 7 0.6222222 23 1 0.729167 29 3 0.7038799 108 7 0.584622 119 7 0.642258 121 7 0.6668860 77 7 0.6616574 88 6 0.4722222 76 6 0.5870130 83 7 0.571429 13 0 0.5122593 101 7 0.579605 125 7 0.732495 125 6 0.655720 88 7 0.7265314 111 6 0.791562 63 3 0.687153 105 6 0.7421355 0.5957228 0.592476 0.6855717 0.566760 0.6838594 0.6768207 0.6320974 0.4708853 0.7450980 0.601606 0.7156863 0.6886586 0.6963298 0.6375223 0.4392157 0.6078431 0.6885134 0.6872549 0.6014508 0.540102 0.5862983 0.760695 0.698752 0.676724 0.5986536 0.5150459 0.669173 0.6961486 0.6648478 0.6867576 0.678027 0.6512945 0.4362745 0.5552783 0.6666667 0.567816 0.5572703 0.725293 0.6485528 0.7523903 0.8021442 0.6593119 0 0.6466266 0.647472 0.00017715 7 0.692470 0.617385 0.07508443 6.6070e-01 0.4929133 insignificant 1.0000e+00 1.0000 insignificant 8.3717e-01 0.212881 insignificant 1.0000e+00 1 insignificant -0.0220879 0.476631 lowCoverage 1 lowCoverage 0.6463496 0.5555556 0.0794073 7 0.652223 0.574274 0.0779490 4.1809e-05 0.96833607 weaklyHypermeth 1.1002e-03 1.000000 weaklyHypermeth 3.9474e-02 0.8851501 weaklyHypermeth 9.3985e-01 1 insignificant 0.06707222 6.8724e-02 insignificant 1.0000e+00 insignificant 0.6463496 0.6707317 -3.7073e-02 6 0.652223 0.706547 -0.0543240 9.6928e-01 0.02086332 weaklyHypometh 1.0000e+00 1.000000 insignificant 9.8625e-01 0.0311197 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.0875894 0.01480646 weaklyHypometh 0.740323 insignificant 0.647887 0.555556 0.0784012 7 0.650924 0.574274 0.0766500 3.0699e-04 0.9763151 weaklyHypermeth 7.3092e-03 1.00000 weaklyHypermeth 1.4550e-02 0.9682493 weaklyHypermeth 3.3837e-01 1 insignificant 0.0891601 2.6858e-02 lowCoverage 8.6637e-01 lowCoverage 0.647887 0.670732 -0.0441639 6 0.650924 0.706547 -0.0556230 8.2497e-01 0.04789389 weaklyHypometh 1.0000e+00 1.00000 insignificant 6.1143e-01 0.104733 insignificant 1.0000e+00 1 insignificant -0.06550146 0.0683889 lowCoverage 1.00000 lowCoverage 0.555556 0.6707317 -0.1341751 6 0.574274 0.706547 -0.1322730 0.997290 3.3129e-05 weaklyHypometh 1 1.3755e-03 weaklyHypometh 0.991366 3.9806e-03 weaklyHypometh 1 1.6014e-01 insignificant -0.1546616 1.7548e-03 weaklyHypometh 0.1949826 insignificant chr8 67763950 67764950 30455 C8orf44 ENSG00000213865 0.695057 232 5 0.546688 168 5 0.542182 121 5 0.676102 130 5 0.8235294 21 1 0.601013 251 5 0.8947368 21 1 0.6978261 43 2 0.8125000 17 2 0.8452381 13 2 0.7668269 58 2 0.6666667 10 1 0.9131944 25 2 0.922222 22 2 0.7412587 24 2 0.7500000 5 0 0.500000 4 0 0.6503229 107 5 0.908333 34 2 0.716380 152 5 0.873684 24 2 0.5714286 20 2 0.63500 106 5 0.895833 20 2 0.968750 25 2 0.681889 188 5 0.7904412 33 2 0.909091 23 2 0.9607843 26 2 0.781895 167 5 0.699115 180 5 0.7724668 303 5 0.6057619 195 5 0.7156863 26 2 0.5465152 97 5 1.000000 4 0 0.6843750 42 2 0.637865 174 5 0.730998 173 5 0.676917 167 5 0.6448030 157 5 0.704221 152 5 0.722290 171 5 0.8491785 0.7487179 0.594570 0.8402715 0.788235 0.8701826 0.8736842 0.6973913 0.7750000 0.8428571 0.750962 0.6000000 0.9083333 0.8733333 0.7202797 0.7000000 0.4000000 0.7227907 0.9066667 0.8668622 0.888421 0.8857143 0.777143 0.891667 0.962500 0.8173745 0.7735294 0.890909 0.9529412 0.9176471 0.8063158 0.891667 0.6374603 0.7058824 0.6803030 1.0000000 0.641250 0.7268421 0.861538 0.8591195 0.7895692 0.8914894 0.8682390 1 0.6913580 0.720179 -0.04297064 4 0.614750 0.692830 -0.07808068 9.1289e-01 0.0030612 lowCoverage 1.0000e+00 0.6131 lowCoverage 8.7217e-01 0.008142 lowCoverage 1.0000e+00 1 lowCoverage -0.0615277 0.205466 lowCoverage 1 lowCoverage 0.6920962 0.5985130 0.0792870 4 0.671033 0.604626 0.0664064 3.4849e-03 0.98679570 lowCoverage 6.8331e-02 1.000000 lowCoverage 1.7049e-01 0.9648821 lowCoverage 1.0000e+00 1 lowCoverage 0.03513656 6.3605e-01 lowCoverage 1.0000e+00 lowCoverage 0.6913580 0.6634146 -3.1903e-02 4 0.614750 0.736917 -0.1221671 8.7922e-01 0.13134931 lowCoverage 1.0000e+00 1.000000 lowCoverage 9.3543e-01 0.4043165 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.0376581 0.26278071 lowCoverage 1.000000 lowCoverage 0.720575 0.598513 0.1235645 5 0.731396 0.604626 0.1267699 3.6806e-06 0.9997747 weaklyHypermeth 1.1153e-04 1.00000 weaklyHypermeth 1.2672e-02 0.9984398 weaklyHypermeth 3.1679e-01 1 insignificant 0.0966643 2.3179e-01 lowCoverage 1.0000e+00 lowCoverage 0.720179 0.663415 0.0238214 5 0.692830 0.736917 -0.0440864 1.1289e-02 0.30202421 weaklyHypermeth 8.0636e-01 1.00000 insignificant 9.5743e-02 0.571184 insignificant 1.0000e+00 1 insignificant 0.09918580 0.0285553 lowCoverage 1.00000 lowCoverage 0.598513 0.6630037 -0.0984241 5 0.604626 0.684300 -0.0796736 0.974261 6.8538e-03 weaklyHypometh 1 1.4900e-01 insignificant 0.979546 8.5766e-02 insignificant 1 1.0000e+00 insignificant 0.0025215 9.7124e-01 lowCoverage 1.0000000 lowCoverage chr8 74424750 74425750 30533 RPL7 ENSG00000147604 0.817812 330 10 0.768626 330 10 0.796145 234 13 0.744725 276 10 0.6895848 235 10 0.848795 411 10 0.7082925 282 10 0.8167789 259 10 0.6723005 189 10 0.7907067 239 10 0.8027160 548 10 0.8318393 211 10 0.8133852 228 10 0.646635 85 6 0.7645703 291 10 0.8604217 188 8 0.708472 856 9 0.8321975 207 10 0.766431 213 10 0.689924 464 10 0.813463 107 10 0.8067853 196 10 0.81814 276 10 0.757955 161 13 0.745902 179 10 0.818581 314 10 0.7713760 226 10 0.741334 124 12 0.7035037 259 10 0.869859 315 10 0.790922 294 10 0.8469696 544 10 0.8115210 221 10 0.6062479 192 10 0.7278825 339 10 0.857668 161 10 0.6295905 151 10 0.820809 327 10 0.771734 309 10 0.857806 343 10 0.8257663 354 10 0.790772 235 10 0.816305 344 10 0.7902599 0.7439915 0.814334 0.7868637 0.798228 0.8323402 0.7078760 0.8249652 0.7111665 0.8229198 0.819562 0.8282118 0.8313589 0.7243206 0.7802202 0.8297177 0.7334418 0.8025359 0.7943656 0.8104269 0.836053 0.8206889 0.834662 0.832869 0.813654 0.7951785 0.7933015 0.783649 0.7855674 0.8537896 0.8010917 0.843167 0.7671214 0.6188906 0.7382052 0.8299355 0.658965 0.7885953 0.782630 0.8419009 0.8016242 0.8182800 0.7870481 10 0.7870309 0.803005 -0.01511067 10 0.782278 0.784801 -0.00252322 9.0077e-01 0.3045624 insignificant 1.0000e+00 1.0000 insignificant 9.3559e-01 0.286628 insignificant 1.0000e+00 1 insignificant -0.0218813 0.278678 insignificant 1 insignificant 0.7870309 0.7347232 0.0569753 10 0.782278 0.773968 0.0083103 1.7544e-03 0.92172763 weaklyHypermeth 3.6188e-02 1.000000 weaklyHypermeth 4.7242e-02 0.8615521 weaklyHypermeth 1.0000e+00 1 insignificant 0.02623139 5.8369e-01 insignificant 1.0000e+00 insignificant 0.7870309 0.8025237 -9.9030e-03 10 0.782278 0.815850 -0.0335722 8.9079e-01 0.11559973 insignificant 1.0000e+00 1.000000 insignificant 9.4762e-01 0.0672836 insignificant 1.0000e+00 1.00000 insignificant -0.0439589 0.05225040 insignificant 1.000000 insignificant 0.803005 0.734723 0.0737854 10 0.784801 0.773968 0.0108335 1.0428e-05 0.8475746 weaklyHypermeth 2.8966e-04 1.00000 weaklyHypermeth 5.0852e-04 0.9110753 weaklyHypermeth 2.1188e-02 1 weaklyHypermeth 0.0481127 3.2820e-01 insignificant 1.0000e+00 insignificant 0.803005 0.802524 0.0083027 10 0.784801 0.815850 -0.0310489 7.2392e-01 0.15959239 insignificant 1.0000e+00 1.00000 insignificant 8.1800e-01 0.348581 insignificant 1.0000e+00 1 insignificant -0.02207762 0.2988948 insignificant 1.00000 insignificant 0.734723 0.8025237 -0.0662583 10 0.773968 0.815850 -0.0418825 0.994175 2.2697e-03 weaklyHypometh 1 5.5358e-02 weaklyHypometh 0.998586 1.5844e-02 weaklyHypometh 1 4.1238e-01 insignificant -0.0701903 1.7315e-01 insignificant 1.0000000 insignificant chr8 74495050 74496050 30537 RPL7 ENSG00000147604 0.841919 344 4 0.645303 332 9 0.648983 122 9 0.754703 352 6 0.6144937 123 9 0.874743 288 8 0.7368137 181 9 0.8297023 161 6 0.6761544 116 8 0.7013228 63 7 0.7628539 317 9 0.8924501 53 5 0.8724014 80 7 0.777778 32 4 0.8730937 84 5 0.5750000 34 3 0.400000 5 1 0.7872221 434 4 0.882396 195 6 0.719729 324 4 0.549298 69 6 0.8558333 45 1 0.70691 204 5 0.547164 77 6 0.829233 92 4 0.841116 364 9 0.6411309 102 8 0.713497 60 4 0.7365065 312 6 0.841675 375 9 0.837865 342 9 0.7138158 255 6 0.1560012 207 6 0.0332309 117 8 0.0000000 191 7 0.166667 43 4 0.1595961 270 8 0.159714 362 9 0.940743 376 6 0.718962 227 6 0.9119448 331 4 0.645833 135 4 0.830436 310 6 0.8914973 0.6348029 0.609986 0.8523334 0.661265 0.8892069 0.7607990 0.8112150 0.6948374 0.8043046 0.817588 0.8872899 0.8511002 0.8590107 0.8395663 0.7341881 NA 0.7314972 0.8770087 0.8638694 0.715755 0.9131126 0.736522 0.891014 0.781179 0.8573769 0.7135023 0.790574 0.7060953 0.8203472 0.7919437 0.815464 0.0660510 0.0324974 0.0000000 0.1578173 0.266606 0.2306003 0.899563 0.8747633 0.8396844 0.6379231 0.8217556 4 0.8112637 0.802964 -0.00810757 8 0.675664 0.745685 -0.07002074 9.4741e-01 0.2669181 insignificant 1.0000e+00 1.0000 insignificant 3.6962e-01 0.841755 insignificant 1.0000e+00 1 insignificant 0.0088494 0.837785 insignificant 1 insignificant 0.8112637 0.1546218 0.6607782 8 0.675664 0.111080 0.5645843 5.9129e-62 1.00000000 hypermethylated 5.9129e-59 1.000000 hypermethylated 2.0470e-20 1.0000000 hypermethylated 1.0235e-17 1 hypermethylated 0.63081829 3.2853e-10 hypermethylated 6.5706e-08 hypermethylated 0.8112637 0.8636693 -2.5499e-02 5 0.675664 0.738782 -0.0631182 9.4999e-01 0.13741793 insignificant 1.0000e+00 1.000000 insignificant 7.7436e-01 0.4258509 insignificant 1.0000e+00 1.00000 insignificant -0.0662306 0.33142677 insignificant 1.000000 insignificant 0.802964 0.154622 0.6692709 8 0.745685 0.111080 0.6346051 2.0353e-50 1.0000000 hypermethylated 2.0353e-47 1.00000 hypermethylated 5.5936e-16 1.0000000 hypermethylated 5.5936e-13 1 hypermethylated 0.6219689 1.0289e-09 hypermethylated 5.1444e-07 hypermethylated 0.802964 0.863669 -0.0241042 5 0.745685 0.738782 0.0069025 8.6519e-01 0.26722096 insignificant 1.0000e+00 1.00000 insignificant 8.7113e-01 0.292170 insignificant 1.0000e+00 1 insignificant -0.07507999 0.2854754 insignificant 1.00000 insignificant 0.154622 0.8636693 -0.7023800 5 0.111080 0.738782 -0.6277025 1.000000 3.1269e-29 hypomethylated 1 1.5635e-26 hypomethylated 1.000000 1.0135e-10 hypomethylated 1 5.0675e-08 hypomethylated -0.6970489 2.5803e-05 hypomethylated 0.0086009 hypomethylated chr8 81375750 81376750 30639 ENSG00000213791 0.896160 413 6 0.706208 613 6 0.558534 270 6 0.961133 416 6 0.6604779 174 6 0.915838 485 6 0.9137270 227 6 0.7862622 380 6 0.8614496 337 6 0.6985541 294 6 0.7856780 334 6 0.6280616 145 6 0.7684740 322 6 0.850891 301 6 0.8204132 397 6 0.8586576 76 4 0.698413 22 2 0.7100351 430 6 0.748416 389 6 0.927574 311 6 0.789011 43 5 0.8793479 128 6 0.76764 286 6 0.713133 187 6 0.830864 95 6 0.918104 518 6 0.8694444 249 6 0.478475 78 6 0.6728697 324 6 0.916187 590 6 0.954188 411 6 0.9454824 380 6 0.5458278 347 6 0.5680391 151 6 0.3872835 147 5 0.307143 47 5 0.4608498 388 6 0.246432 463 6 0.934339 371 6 0.912984 339 6 0.9206826 336 6 0.750334 269 6 0.896270 300 6 0.9104762 0.8127504 0.651460 0.9565581 0.857077 0.8864560 0.8943793 0.9132453 0.8494718 0.9182282 0.911368 0.6993159 0.8742470 0.8412446 0.8763628 0.8233515 0.9262158 0.6901454 0.8650164 0.9065368 0.917654 0.8402122 0.898921 0.689558 0.841426 0.8936098 0.8707431 0.677059 0.8862974 0.9130914 0.9496421 0.937511 0.4778149 0.6280644 0.3709839 0.2661190 0.569535 0.2117761 0.931892 0.8800644 0.9176310 0.7542245 0.8798235 6 0.8535354 0.892064 -0.04052756 6 0.652502 0.729608 -0.07710658 9.9814e-01 0.0243146 weaklyHypometh 1.0000e+00 1.0000 insignificant 9.9404e-01 0.439497 insignificant 1.0000e+00 1 insignificant -0.0234810 0.623489 insignificant 1 insignificant 0.8537818 0.4141283 0.4363329 6 0.684418 0.278894 0.4055242 1.3020e-28 0.99999490 hypermethylated 2.6040e-26 1.000000 hypermethylated 4.0432e-10 0.9999988 hypermethylated 5.7732e-08 1 hypermethylated 0.36848537 3.1991e-04 hypermethylated 2.2851e-02 hypermethylated 0.8559429 0.8817337 -2.3540e-02 6 0.787264 0.902555 -0.1152904 9.7957e-01 0.16516702 insignificant 1.0000e+00 1.000000 insignificant 9.4193e-01 0.2351965 insignificant 1.0000e+00 1.00000 insignificant -0.0951743 0.04921120 weaklyHypometh 1.000000 insignificant 0.892575 0.414128 0.4849502 6 0.769236 0.278894 0.4903415 1.9822e-21 1.0000000 hypermethylated 3.9644e-19 1.00000 hypermethylated 8.4319e-09 1.0000000 hypermethylated 1.2046e-06 1 hypermethylated 0.3919664 1.0769e-04 hypermethylated 1.0769e-02 hypermethylated 0.893805 0.881734 0.0165154 6 0.819997 0.902555 -0.0825583 5.5496e-01 0.63600101 insignificant 1.0000e+00 1.00000 insignificant 6.0519e-01 0.683436 insignificant 1.0000e+00 1 insignificant -0.07169331 0.1929286 insignificant 1.00000 insignificant 0.416016 0.8816605 -0.4546761 6 0.464824 0.886314 -0.4214903 0.999998 2.9440e-12 hypomethylated 1 3.6800e-10 hypomethylated 0.999846 4.1132e-08 hypomethylated 1 1.0283e-05 hypomethylated -0.4636597 6.5940e-05 hypomethylated 0.0164851 hypomethylated chr8 81500650 81501650 30644 ENSG00000206649 0.690312 149 7 0.611214 101 5 0.716667 46 5 0.799649 178 7 0.7532738 107 7 0.826531 73 5 0.7455848 95 4 0.7651261 69 7 0.6695527 54 5 0.7465278 62 7 0.7347557 149 7 0.6774892 40 4 0.7494661 99 7 0.736326 93 7 0.7454545 80 7 0.6991342 37 4 0.655556 39 2 0.7138377 222 6 0.822051 113 5 0.815476 55 5 0.822222 30 2 0.8095238 11 0 0.72392 128 4 0.705952 36 5 0.692915 55 3 0.812025 105 7 0.8000000 27 4 0.857143 20 2 0.8166667 97 4 0.716676 136 5 0.837358 88 5 0.7128205 46 5 0.6064349 122 7 0.4442110 76 5 0.6079281 145 7 0.312500 10 0 0.7789794 82 5 0.789481 131 5 0.770408 92 7 0.667794 115 7 0.8732393 138 7 0.798485 63 4 0.766356 135 7 0.7236436 0.6915469 0.720430 0.7979775 0.728879 0.8018433 0.8007060 0.8137255 0.8380580 0.7974910 0.713369 0.6695992 0.7748795 0.7794201 0.7741935 0.6471163 0.7412492 0.7296933 0.8168172 0.8163082 0.786216 0.8996416 0.738825 0.696953 0.659240 0.7845669 0.6715203 0.806452 0.8163082 0.7476583 0.8442140 0.757265 0.6648629 0.5514442 0.5304471 0.5316001 0.631117 0.8048181 0.768817 0.7348048 0.8579499 0.8065284 0.7827920 2 0.7441734 0.777920 -0.01952111 5 0.727762 0.770813 -0.04305069 9.6709e-01 0.1036869 insignificant 1.0000e+00 1.0000 insignificant 8.9374e-01 0.223299 insignificant 1.0000e+00 1 insignificant -0.0419027 0.063056 lowCoverage 1 lowCoverage 0.7447496 0.6477876 0.1171484 5 0.759433 0.750683 0.0087503 9.5723e-04 0.99672420 weaklyHypermeth 2.1272e-02 1.000000 weaklyHypermeth 1.6189e-02 0.9991642 weaklyHypermeth 4.0474e-01 1 insignificant 0.14377681 1.1883e-01 lowCoverage 1.0000e+00 lowCoverage 0.7441734 0.7937385 -4.4242e-02 7 0.727762 0.781906 -0.0541443 9.8571e-01 0.06256619 insignificant 1.0000e+00 1.000000 insignificant 8.6434e-01 0.2832872 insignificant 1.0000e+00 1.00000 insignificant -0.0415575 0.29062981 insignificant 1.000000 insignificant 0.777920 0.645907 0.1360859 5 0.770813 0.643833 0.1269797 2.8883e-06 0.9999904 weaklyHypermeth 9.0259e-05 1.00000 weaklyHypermeth 1.1622e-04 0.9999959 weaklyHypermeth 6.1168e-03 1 weaklyHypermeth 0.1856796 5.8753e-02 lowCoverage 1.0000e+00 lowCoverage 0.777920 0.793738 -0.0201188 5 0.770813 0.781906 -0.0110936 8.4284e-01 0.33099014 insignificant 1.0000e+00 1.00000 insignificant 5.7677e-01 0.627238 insignificant 1.0000e+00 1 insignificant 0.00034528 0.9928875 lowCoverage 1.00000 lowCoverage 0.645907 0.7937385 -0.1570430 5 0.643833 0.781906 -0.1380733 0.999976 6.5443e-04 weaklyHypometh 1 1.9959e-02 weaklyHypometh 0.999947 7.5140e-03 weaklyHypometh 1 2.3293e-01 insignificant -0.1853343 6.2259e-02 lowCoverage 1.0000000 lowCoverage chr8 96196850 96197850 30847 ENSG00000200525 0.695994 326 11 0.595486 198 11 0.568280 118 10 0.709131 149 9 0.8110029 79 10 0.641382 432 10 0.7385426 104 10 0.7061572 137 10 0.5301010 73 6 0.7712091 96 6 0.7296979 243 10 0.6174267 86 10 0.6212839 216 10 0.779630 54 6 0.7880728 128 10 0.6465035 89 10 0.486684 85 6 0.6065161 189 10 0.592352 93 10 0.685668 320 10 0.702809 61 2 0.7445437 107 9 0.79296 119 10 0.724787 75 9 0.704444 67 6 0.685911 204 10 0.5688748 110 10 0.672783 65 6 0.6439971 104 10 0.705808 142 10 0.594189 188 10 0.7060742 384 10 0.3725633 123 10 0.4834083 147 10 0.6105158 134 10 0.519643 33 2 0.4294619 188 10 0.429395 170 11 0.744158 218 11 0.738739 228 11 0.6962457 200 10 0.677413 194 10 0.743583 235 11 0.7071552 0.6242252 0.631496 0.8041351 0.798224 0.6665530 0.7122614 0.7330575 0.5529939 0.7576861 0.726927 0.6570187 0.6791335 0.7151858 0.7634162 0.6420671 0.5955609 0.6415021 0.6021270 0.6895704 0.692447 0.6942095 0.788270 0.699512 0.678178 0.6752637 0.6504178 0.674193 0.6482782 0.6991540 0.6278486 0.694993 0.3810061 0.5324143 0.6245873 0.5123571 0.484556 0.4133089 0.742070 0.7225938 0.7021686 0.7205355 0.7866774 3 0.6898911 0.675277 0.00309112 10 0.662556 0.667174 -0.00461799 5.9353e-01 0.3453108 insignificant 1.0000e+00 1.0000 insignificant 5.0783e-01 0.339318 insignificant 1.0000e+00 1 insignificant -0.0212096 0.435904 insignificant 1 insignificant 0.6898911 0.4779874 0.2145771 10 0.662556 0.423265 0.2392909 1.5707e-22 0.99991454 hypermethylated 1.7452e-20 1.000000 hypermethylated 2.0941e-09 0.9996574 hypermethylated 2.3268e-07 1 hypermethylated 0.19189156 9.9196e-04 weaklyHypermeth 5.2209e-02 weaklyHypermeth 0.6900312 0.7516279 -5.0007e-02 10 0.668243 0.728404 -0.0601613 9.9981e-01 0.00751741 weaklyHypometh 1.0000e+00 0.536958 insignificant 9.9826e-01 0.1049256 insignificant 1.0000e+00 1.00000 insignificant -0.0539716 0.03911715 weaklyHypometh 1.000000 insignificant 0.675277 0.477987 0.1958488 10 0.667174 0.423265 0.2439089 3.9099e-18 0.9999999 weaklyHypermeth 4.3443e-16 1.00000 weaklyHypermeth 4.2631e-10 0.9999998 weaklyHypermeth 8.5263e-08 1 weaklyHypermeth 0.2131011 6.0132e-04 hypermethylated 3.7583e-02 hypermethylated 0.675926 0.751628 -0.0535088 10 0.682371 0.728404 -0.0460326 9.9390e-01 0.00948302 weaklyHypometh 1.0000e+00 1.00000 insignificant 9.3354e-01 0.069146 insignificant 1.0000e+00 1 insignificant -0.03276208 0.1689639 insignificant 1.00000 insignificant 0.478589 0.7516279 -0.2908693 11 0.461744 0.728404 -0.2666604 0.999996 3.6070e-14 hypomethylated 1 7.2141e-12 hypomethylated 0.999997 1.7965e-08 hypomethylated 1 5.9884e-06 hypomethylated -0.2458632 3.7879e-04 hypomethylated 0.0541126 hypomethylated chr8 96774350 96775350 30865 ENSG00000223297 0.831729 266 5 0.634488 144 6 0.334545 49 5 0.897689 263 7 0.5500000 16 0 0.869538 300 7 0.7532468 30 2 0.7870650 76 5 0.5569280 74 5 0.6961580 65 5 0.8532460 178 7 0.4500000 15 0 0.8546398 169 5 0.896825 42 5 0.7600108 90 5 0.5833333 24 2 0.483333 15 0 0.6830857 391 6 0.873161 133 5 0.833331 226 7 0.836667 30 4 0.6703146 122 5 0.85848 97 5 0.558571 50 5 0.851177 147 5 0.769949 149 5 0.6536796 95 5 0.544444 26 2 0.7533858 119 5 0.840875 167 5 0.830135 143 7 0.7786899 226 7 0.6477127 155 7 0.6367725 152 5 1.0000000 26 1 0.455357 80 4 0.2241897 76 5 0.635620 199 7 0.815192 213 5 0.773567 271 7 0.7767302 380 7 0.776422 167 5 0.824057 361 7 0.7626488 0.6659628 0.318331 0.8549997 0.613388 0.8170839 0.5461997 0.7160650 0.5442500 0.7296501 0.847417 0.3360656 0.7819182 0.8631603 0.7373723 0.5275359 0.4398907 0.5899279 0.8172590 0.7757115 0.880874 0.6496343 0.824821 0.620492 0.760494 0.7511121 0.7476403 0.377049 0.7497239 0.8218639 0.7699885 0.741191 0.5500675 0.7943881 NA 0.4569672 0.263776 0.6717958 0.793736 0.7760661 0.6882412 0.7621344 0.7480103 1 0.7431800 0.756382 -0.01403506 5 0.786618 0.752467 0.03415139 9.4086e-01 0.6745047 insignificant 1.0000e+00 1.0000 insignificant 9.2470e-01 0.704471 insignificant 1.0000e+00 1 insignificant -0.0364129 0.469357 lowCoverage 1 lowCoverage 0.7433594 0.6351744 0.1063784 5 0.790407 0.589770 0.2006364 1.1029e-08 0.19894433 weaklyHypermeth 4.2418e-07 1.000000 weaklyHypermeth 2.8293e-04 0.2759288 weaklyHypermeth 1.1789e-02 1 weaklyHypermeth 0.10917570 3.6114e-01 lowCoverage 1.0000e+00 lowCoverage 0.7433594 0.7672414 -1.7597e-02 5 0.790407 0.802912 -0.0125049 8.4361e-01 0.47985528 insignificant 1.0000e+00 1.000000 insignificant 4.6440e-01 0.3157879 insignificant 1.0000e+00 1.00000 insignificant -0.0840759 0.04295554 lowCoverage 1.000000 lowCoverage 0.757132 0.635174 0.1234918 5 0.789238 0.589770 0.1994677 2.2084e-05 0.4070100 weaklyHypermeth 5.8115e-04 1.00000 weaklyHypermeth 2.2905e-03 0.5451170 weaklyHypermeth 8.4833e-02 1 weaklyHypermeth 0.1455886 2.3151e-01 lowCoverage 1.0000e+00 lowCoverage 0.757132 0.767241 -0.0036087 5 0.789238 0.802912 -0.0136735 7.8849e-01 0.60093278 insignificant 1.0000e+00 1.00000 insignificant 7.1883e-01 0.684264 insignificant 1.0000e+00 1 insignificant -0.04766302 0.1878443 insignificant 1.00000 insignificant 0.635174 0.7672414 -0.1314464 5 0.589770 0.802912 -0.2131412 0.697590 1.2110e-03 weaklyHypometh 1 3.1051e-02 weaklyHypometh 0.903425 4.0036e-03 weaklyHypometh 1 1.6014e-01 insignificant -0.1932516 1.2377e-01 lowCoverage 1.0000000 lowCoverage chr8 97934750 97935750 30907 ENSG00000104324 0.886206 51 5 0.855147 69 7 0.991379 43 1 0.833333 53 5 0.6185897 40 1 0.787301 227 8 0.8653846 42 1 0.9196206 94 4 0.9226190 46 4 0.4791667 29 2 0.7884640 121 4 1.0000000 36 1 1.0000000 59 4 0.900000 10 1 0.8254630 63 4 0.5909091 30 1 0.795495 52 2 0.6868056 39 4 0.821486 80 8 0.732646 175 8 0.885417 24 0 0.8865741 75 4 0.89286 42 5 0.924272 41 4 0.925576 77 4 0.892646 195 8 0.8127083 82 4 0.972222 15 1 0.8715278 50 4 0.855665 148 8 0.834170 174 8 0.7633683 271 8 0.8188973 70 4 0.8447590 86 4 0.8224206 148 8 0.747024 43 4 0.6833333 27 1 0.702427 108 8 0.787500 33 5 0.822222 38 4 0.8184524 38 5 0.750000 11 0 0.777462 60 5 0.9431818 0.9507353 0.956897 0.8750000 0.944712 0.8825758 0.9519231 0.9127783 0.8779762 0.8958333 0.964059 1.0000000 1.0000000 0.9125756 0.9134259 0.9466665 0.9581081 0.8750000 0.9102564 0.9778986 0.583333 0.9765625 1.000000 0.883557 0.846628 0.8666295 0.9593750 0.930556 0.9340278 0.9739583 0.9728608 0.968531 0.7263047 0.7733304 0.9097222 0.8095238 0.927083 0.8589744 0.937500 0.9765625 0.8958333 1.0000000 0.8645833 0 0.8594555 0.871022 -0.02369123 8 0.721788 0.858234 -0.13644642 8.7167e-01 0.1724574 insignificant 1.0000e+00 1.0000 insignificant 7.6730e-01 0.093012 insignificant 1.0000e+00 1 insignificant -0.0614162 0.089652 lowCoverage 1 lowCoverage 0.8600884 0.7572614 0.0902298 8 0.801986 0.650952 0.1510345 1.0475e-07 0.97143104 weaklyHypermeth 3.3789e-06 1.000000 weaklyHypermeth 1.2621e-03 0.6122386 weaklyHypermeth 4.3521e-02 1 weaklyHypermeth 0.04519066 2.9308e-01 lowCoverage 1.0000e+00 lowCoverage 0.8605166 0.7500000 1.5005e-02 4 0.818901 0.810172 0.0087293 7.4530e-02 0.16684064 lowCoverage 1.0000e+00 1.000000 lowCoverage 3.0891e-01 0.1284099 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.0238734 0.48711488 lowCoverage 1.000000 lowCoverage 0.870914 0.757261 0.1196137 8 0.842482 0.650952 0.1915305 3.4123e-07 0.9997083 weaklyHypermeth 1.4218e-05 1.00000 weaklyHypermeth 3.0395e-03 0.9924177 weaklyHypermeth 9.8050e-02 1 weaklyHypermeth 0.1066069 9.8721e-03 lowCoverage 4.1134e-01 lowCoverage 0.871320 0.750000 0.0707932 4 0.854042 0.810172 0.0438707 3.0059e-02 0.51467376 lowCoverage 1.0000e+00 1.00000 lowCoverage 5.6706e-02 0.535058 lowCoverage 1.0000e+00 1 lowCoverage 0.08528966 0.0011906 lowCoverage 0.55149 lowCoverage 0.758836 0.7500000 -0.0120247 4 0.732321 0.810172 -0.0778512 0.624011 1.3483e-02 lowCoverage 1 2.5440e-01 lowCoverage 0.307455 9.3646e-02 lowCoverage 1 1.0000e+00 lowCoverage -0.0213172 5.1284e-01 lowCoverage 1.0000000 lowCoverage chr8 98515550 98516550 30925 ENSG00000207215 0.606156 348 5 0.530617 246 5 0.474704 108 5 0.731702 152 5 0.6315789 88 5 0.617999 410 5 0.5201297 141 5 0.5946312 186 5 0.5799096 154 5 0.5952953 118 5 0.6271967 232 5 0.5938619 104 5 0.5658730 142 5 NA 0 0 0.5650721 146 5 0.5772430 76 5 0.434162 129 5 0.4840154 179 5 0.699056 248 5 0.598020 366 5 0.606211 76 4 0.6047619 96 5 0.64382 197 5 0.591072 123 5 0.526667 64 5 0.639795 310 5 0.4688670 80 4 0.623718 59 5 0.5708966 190 5 0.610496 330 5 0.659125 370 5 0.6413271 389 5 0.2606999 265 5 0.1521288 147 5 0.5339539 342 5 0.498291 70 5 0.2793407 88 5 0.597377 321 5 0.566993 338 5 0.581229 341 5 0.5828388 295 5 0.594139 343 5 0.542094 284 5 0.4994560 0.4170087 0.388652 0.6545260 0.515275 0.5396379 0.4228093 0.5001037 0.4701925 0.4907651 0.518784 0.4835450 0.4708653 NA 0.4361192 0.4559703 0.3854359 0.3757467 0.6131468 0.5160778 0.507437 0.5491242 0.546857 0.483409 0.438538 0.5569834 0.4147344 0.541547 0.4680615 0.5204345 0.5632706 0.545727 0.2680301 0.1915992 0.6057802 0.3576797 0.270402 0.4785313 0.452898 0.4557883 0.4629222 0.4899442 0.4339841 5 0.5387629 0.568739 -0.03362362 5 0.590846 0.622465 -0.03161832 9.9293e-01 0.0582432 insignificant 1.0000e+00 1.0000 insignificant 8.2691e-01 0.116239 insignificant 1.0000e+00 1 insignificant -0.0185166 0.424523 lowCoverage 1 lowCoverage 0.5387629 0.3795620 0.1630178 5 0.590846 0.381079 0.2097670 1.4985e-09 0.76434572 weaklyHypermeth 6.2436e-08 1.000000 weaklyHypermeth 2.2517e-03 0.8354029 weaklyHypermeth 7.0366e-02 1 weaklyHypermeth 0.19341486 4.5323e-02 lowCoverage 1.0000e+00 lowCoverage 0.5387629 0.5015615 2.7579e-02 5 0.590846 0.572751 0.0180950 2.4601e-01 0.64235673 insignificant 1.0000e+00 1.000000 insignificant 5.2026e-01 0.6617634 insignificant 1.0000e+00 1.00000 insignificant 0.0069213 0.71598769 lowCoverage 1.000000 lowCoverage 0.568739 0.379562 0.1988286 5 0.622465 0.381079 0.2413853 6.8503e-08 0.9357869 weaklyHypermeth 3.2620e-06 1.00000 weaklyHypermeth 4.8504e-03 0.9861930 weaklyHypermeth 1.4266e-01 1 insignificant 0.2119315 3.3228e-02 lowCoverage 9.4936e-01 lowCoverage 0.568739 0.501562 0.0619920 5 0.622465 0.572751 0.0497133 3.4188e-03 0.87827163 weaklyHypermeth 3.7986e-01 1.00000 insignificant 3.8525e-02 0.569944 weaklyHypermeth 1.0000e+00 1 insignificant 0.02543787 0.1815297 lowCoverage 1.00000 lowCoverage 0.379562 0.5015615 -0.1804585 5 0.381079 0.572751 -0.1916721 0.521777 3.4082e-03 weaklyHypometh 1 7.9259e-02 weaklyHypometh 0.838862 1.9954e-02 weaklyHypometh 1 4.7362e-01 insignificant -0.1864936 5.1319e-02 insignificant 1.0000000 insignificant chr8 98867150 98868150 30932 LAPTM4B ENSG00000104341 0.714649 422 9 0.744259 340 9 0.638071 280 9 0.783288 290 9 0.6592278 166 9 0.745985 436 9 0.6285535 295 9 0.7188916 206 9 0.7282935 188 9 0.6921624 160 7 0.7303188 352 9 0.7740410 136 6 0.7379964 210 9 0.652597 38 4 0.7147181 232 9 0.5819270 120 8 0.668300 117 6 0.8325062 319 9 0.836923 239 9 0.785666 390 9 0.706671 101 9 0.8504464 83 6 0.72744 203 9 0.814861 108 9 0.856613 79 4 0.744367 408 9 0.7562793 151 9 0.591751 76 7 0.7691313 273 9 0.802981 440 8 0.667875 380 9 0.7669184 516 9 0.7023433 262 9 0.7281398 237 9 0.5309929 260 9 0.746254 81 6 0.6599926 118 7 0.746676 419 9 0.829583 308 9 0.783276 425 9 0.7557215 333 9 0.806303 269 9 0.858096 323 9 0.8463342 0.7779868 0.769508 0.8083175 0.744325 0.8035241 0.7711259 0.7816990 0.8170898 0.7676630 0.798081 0.7430617 0.8080561 0.8026457 0.7980109 0.6678693 0.7887405 0.8558498 0.8477938 0.8078772 0.798537 0.8058105 0.795138 0.847328 0.889431 0.8211725 0.8168462 0.718652 0.8150902 0.8479873 0.7734710 0.802021 0.8133330 0.8375956 0.6829908 0.8404342 0.786347 0.8034567 0.899276 0.8630585 0.8227362 0.8538282 0.8997581 6 0.7764252 0.780973 -0.01336571 9 0.713287 0.764712 -0.05142540 9.0709e-01 0.0978114 insignificant 1.0000e+00 1.0000 insignificant 9.5534e-01 0.035492 weaklyHypometh 1.0000e+00 1 insignificant -0.0361922 0.186428 insignificant 1 insignificant 0.7767423 0.7688953 0.0043813 9 0.761072 0.654529 0.1065428 1.2681e-02 0.52376243 weaklyHypermeth 2.3056e-01 1.000000 insignificant 2.9900e-01 0.4611171 insignificant 1.0000e+00 1 insignificant 0.03268567 4.0438e-01 insignificant 1.0000e+00 insignificant 0.7766971 0.8341375 -5.8903e-02 9 0.739351 0.823824 -0.0844731 9.9917e-01 0.00089579 weaklyHypometh 1.0000e+00 0.134584 insignificant 9.9993e-01 0.0013827 weaklyHypometh 1.0000e+00 0.39349 insignificant -0.0881771 0.00318005 weaklyHypometh 0.318005 insignificant 0.781050 0.768727 0.0170231 9 0.786102 0.623123 0.1629788 9.0607e-03 0.8283182 weaklyHypermeth 1.6779e-01 1.00000 insignificant 8.7656e-02 0.7760628 insignificant 1.0000e+00 1 insignificant 0.0688779 1.1928e-01 insignificant 1.0000e+00 insignificant 0.780973 0.833937 -0.0478735 9 0.764712 0.806207 -0.0414950 9.3707e-01 0.00143810 weaklyHypometh 1.0000e+00 0.31583 insignificant 9.2785e-01 0.030252 weaklyHypometh 1.0000e+00 1 insignificant -0.05198495 0.0865946 insignificant 1.00000 insignificant 0.769455 0.8341375 -0.0637252 9 0.714032 0.823824 -0.1097924 0.997211 5.3382e-04 weaklyHypometh 1 1.7220e-02 weaklyHypometh 0.991375 1.0930e-02 weaklyHypometh 1 3.2147e-01 insignificant -0.1208628 1.4416e-02 weaklyHypometh 0.5721022 insignificant chr8 102189950 102190950 31025 ENSG00000207080 0.789715 207 7 0.686768 167 7 0.8616871 188 7 0.8970970 227 7 0.7085963 187 7 0.875789 296 7 0.6384844 209 7 0.682823 244 7 0.7570497 164 7 0.7767780 174 7 0.873585 340 7 0.687463 97 7 0.6375171 209 7 0.90184323 140 7 0.8383456 276 7 0.7171053 102 7 0.0000000 1 0 0.5607549 288 7 0.103755 561 7 0.801211 189 7 0.415071 129 7 0.744745 108 7 0.873368 159 7 0.757555 156 7 0.716209 98 7 0.7987451 356 7 0.8127156 235 7 0.6720619 125 7 0.8380725 418 7 0.6874747 386 7 0.8575916 244 7 0.755014 319 7 0.2306325 356 7 0.1563129 208 7 0.2832606 293 7 0.2619048 31 4 0.063743 339 8 0.6596706 454 7 0.889491 208 7 0.769403 197 7 0.747548 141 7 0.8865623 221 7 0.4316878 151 7 0.791410 0.679557 0.8618251 0.898532 0.8099702 0.909707 0.645407 0.8758848 0.8630735 0.8835340 0.877110 0.7734405 0.6352146 0.905905 0.8435502 0.8123225 NA 0.6431836 0.1213788 0.806623 0.420589 0.7508997 0.856584 0.971274 0.706612 0.7958008 0.806911 0.866615 0.8355241 0.679451 0.8576849 0.757990 0.2368537 0.1685426 0.31144270 0.27017196 0.0823600 0.6758033 0.890775 0.769033 0.7354596 0.8822018 0.4398641 7 0.7194093 0.780827 -0.0598908 7 0.587414 0.637201 -0.0497865 0.985415 1.2041e-01 insignificant 1 1.0000e+00 insignificant 0.806020 9.2458e-01 insignificant 1 1.0000000 insignificant -0.05423354 0.4036081 insignificant 1 insignificant 0.7194093 0.3509816 0.37152067 7 0.587414 0.257454 0.32996023 1.6314e-10 1.0000e+00 hypermethylated 6.0422e-09 1.00000000 hypermethylated 1.0054e-11 1.0000e+00 hypermethylated 1.6756e-09 1.0000e+00 hypermethylated 0.4138975 2.1106e-03 weaklyHypermeth 8.7941e-02 weaklyHypermeth 0.721138 0.7592593 -0.0403984 7 0.714431 0.760948 -0.0465176 8.9389e-01 3.8419e-01 insignificant 1.0000000 1.0000e+00 insignificant 4.8243e-01 8.4859e-01 insignificant 1.0000000 1.0000000 insignificant -0.05512005 0.59425821 insignificant 1.00000 insignificant 0.780827 0.3509816 0.4431546 7 0.637201 0.257454 0.37974677 1.4855e-20 1.0000e+00 hypermethylated 1.6505e-18 1.0000000 hypermethylated 5.2100e-12 1.0000e+00 hypermethylated 8.6834e-10 1.0000000 hypermethylated 0.4681311 1.3919e-03 weaklyHypermeth 6.3268e-02 weaklyHypermeth 0.782465 0.7592593 0.02236066 7 0.783544 0.760948 0.0225957 4.6237e-01 0.89997588 insignificant 1.00000000 1.00000 insignificant 0.71430222 0.84655961 insignificant 1.000000 1.00000 insignificant -0.00088651 0.99254672 insignificant 1.00000 insignificant 0.3524492 0.7592593 -0.4162516 7 0.331012 0.760948 -0.4299359 1.00000000 3.9696e-09 hypomethylated 1.00000 4.4106e-07 hypomethylated 1.0000000 3.8678e-07 hypomethylated 1.00000 6.4463e-05 hypomethylated -0.4690176 3.3312e-03 weaklyHypometh 1.5142e-01 insignificant chr8 102190350 102191350 31026 ENSG00000207080 0.789715 207 7 0.686768 167 7 0.8616871 188 7 0.8970970 227 7 0.7085963 187 7 0.875789 296 7 0.6384844 209 7 0.682823 244 7 0.7570497 164 7 0.7767780 174 7 0.873585 340 7 0.687463 97 7 0.6375171 209 7 0.90184323 140 7 0.8383456 276 7 0.7171053 102 7 0.0000000 1 0 0.5607549 288 7 0.103755 561 7 0.801211 189 7 0.415071 129 7 0.744745 108 7 0.873368 159 7 0.757555 156 7 0.716209 98 7 0.7987451 356 7 0.8127156 235 7 0.6720619 125 7 0.8380725 418 7 0.6874747 386 7 0.8575916 244 7 0.755014 319 7 0.2306325 356 7 0.1563129 208 7 0.2832606 293 7 0.2619048 31 4 0.063743 339 8 0.6596706 454 7 0.889491 208 7 0.769403 197 7 0.747548 141 7 0.8865623 221 7 0.4316878 151 7 0.791410 0.679557 0.8618251 0.898532 0.8099702 0.909707 0.645407 0.8758848 0.8630735 0.8835340 0.877110 0.7734405 0.6352146 0.905905 0.8435502 0.8123225 NA 0.6431836 0.1213788 0.806623 0.420589 0.7508997 0.856584 0.971274 0.706612 0.7958008 0.806911 0.866615 0.8355241 0.679451 0.8576849 0.757990 0.2368537 0.1685426 0.31144270 0.27017196 0.0823600 0.6758033 0.890775 0.769033 0.7354596 0.8822018 0.4398641 7 0.7194093 0.780827 -0.0598908 7 0.587414 0.637201 -0.0497865 0.985415 1.2041e-01 insignificant 1 1.0000e+00 insignificant 0.806020 9.2458e-01 insignificant 1 1.0000000 insignificant -0.05423354 0.4036081 insignificant 1 insignificant 0.7194093 0.3509816 0.37152067 7 0.587414 0.257454 0.32996023 1.6314e-10 1.0000e+00 hypermethylated 6.0422e-09 1.00000000 hypermethylated 1.0054e-11 1.0000e+00 hypermethylated 1.6756e-09 1.0000e+00 hypermethylated 0.4138975 2.1106e-03 weaklyHypermeth 8.7941e-02 weaklyHypermeth 0.721138 0.7592593 -0.0403984 7 0.714431 0.760948 -0.0465176 8.9389e-01 3.8419e-01 insignificant 1.0000000 1.0000e+00 insignificant 4.8243e-01 8.4859e-01 insignificant 1.0000000 1.0000000 insignificant -0.05512005 0.59425821 insignificant 1.00000 insignificant 0.780827 0.3509816 0.4431546 7 0.637201 0.257454 0.37974677 1.4855e-20 1.0000e+00 hypermethylated 1.6505e-18 1.0000000 hypermethylated 5.2100e-12 1.0000e+00 hypermethylated 8.6834e-10 1.0000000 hypermethylated 0.4681311 1.3919e-03 weaklyHypermeth 6.3268e-02 weaklyHypermeth 0.782465 0.7592593 0.02236066 7 0.783544 0.760948 0.0225957 4.6237e-01 0.89997588 insignificant 1.00000000 1.00000 insignificant 0.71430222 0.84655961 insignificant 1.000000 1.00000 insignificant -0.00088651 0.99254672 insignificant 1.00000 insignificant 0.3524492 0.7592593 -0.4162516 7 0.331012 0.760948 -0.4299359 1.00000000 3.9696e-09 hypomethylated 1.00000 4.4106e-07 hypomethylated 1.0000000 3.8678e-07 hypomethylated 1.00000 6.4463e-05 hypomethylated -0.4690176 3.3312e-03 weaklyHypometh 1.5142e-01 insignificant chr8 102207550 102208550 31029 ENSG00000207080 0.018509 1106 18 0.018147 486 18 0.0205764 628 18 0.0687422 879 18 0.0032051 517 18 0.068459 933 18 0.0148617 721 18 0.060191 540 18 0.0213614 649 20 0.0172214 784 18 0.069640 503 18 0.029869 651 20 0.0066932 534 20 0.01496841 265 13 0.0073542 616 20 0.0241429 613 17 0.1084848 311 9 0.0392993 1318 18 0.010184 623 18 0.013088 886 18 0.078827 245 16 0.056671 403 16 0.089243 510 19 0.051860 293 17 0.058785 351 18 0.0086646 771 18 0.0730912 562 18 0.1037879 163 15 0.0081101 734 20 0.0093001 667 18 0.0131794 617 18 0.028689 866 18 0.0107888 377 18 0.0037173 726 18 0.0949519 376 10 0.0034602 237 17 0.051570 370 19 0.0026418 864 18 0.055198 1340 18 0.049769 988 18 0.065213 857 18 0.0118996 1655 18 0.0736741 777 18 0.016548 0.018499 0.0215790 0.015298 0.0017319 0.018391 0.015282 0.0195167 0.0143980 0.0247871 0.019511 0.0280984 0.0071566 0.016337 0.0085336 0.0299161 0.0784561 0.0173919 0.0115538 0.012784 0.054762 0.0079392 0.023077 0.024935 0.004396 0.0065246 0.021933 0.041510 0.0072953 0.008083 0.0138107 0.028344 0.0112988 0.0053890 0.03095417 0.00441036 0.0250058 0.0027631 0.012568 0.011366 0.0130248 0.0089237 0.0230693 16 0.0202020 0.023293 0.0011437 18 0.033116 0.108247 -0.0751306 0.974679 9.8866e-01 insignificant 1 1.0000e+00 insignificant 0.715216 9.9366e-01 insignificant 1 1.0000000 insignificant -0.01660078 0.1716626 insignificant 1 insignificant 0.0202244 0.0091525 0.01239009 18 0.039740 0.039068 0.00067197 1.3698e-02 1.0000e+00 weaklyHypermeth 1.8511e-01 1.00000000 insignificant 2.4093e-02 1.0000e+00 weaklyHypermeth 4.2268e-01 1.0000e+00 insignificant 0.0038949 8.2250e-01 insignificant 1.0000e+00 insignificant 0.020220 0.0217198 0.0029654 18 0.039740 0.084664 -0.0449244 4.9232e-01 9.0060e-01 insignificant 1.0000000 1.0000e+00 insignificant 8.2016e-01 7.6846e-01 insignificant 1.0000000 1.0000000 insignificant -0.01940087 0.16014783 insignificant 1.00000 insignificant 0.023162 0.0091525 0.0119135 18 0.089896 0.039068 0.05082873 3.2573e-01 9.9999e-01 insignificant 1.0000e+00 1.0000000 insignificant 4.5243e-01 9.9999e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0204957 2.9192e-01 insignificant 1.0000e+00 insignificant 0.022996 0.0217198 0.00099343 18 0.049896 0.084664 -0.0347676 7.8693e-01 0.81181945 insignificant 1.00000000 1.00000 insignificant 0.98698943 0.50732066 insignificant 1.000000 1.00000 insignificant -0.00280008 0.85045079 insignificant 1.00000 insignificant 0.0091588 0.0215533 -0.0094656 18 0.042465 0.048548 -0.0060830 0.99754820 4.1561e-02 weaklyHypometh 1.00000 6.0233e-01 insignificant 0.9999681 1.7888e-01 insignificant 1.00000 1.0000e+00 insignificant -0.0232958 2.4771e-01 insignificant 1.0000e+00 insignificant chr8 103475150 103476150 31073 ENSG00000208813 0.713675 61 5 0.784632 122 5 0.5645455 49 4 0.7777778 58 5 0.4035714 39 5 0.811944 85 5 0.3420635 46 5 0.736194 91 5 0.7481481 48 5 0.8400000 25 4 0.684474 181 5 0.766667 11 1 0.6833974 75 5 0.67777778 41 5 0.7066667 46 5 0.6166667 18 0 0.3333333 9 0 0.5794872 75 5 0.743434 51 5 0.633564 51 5 0.583333 8 0 0.800000 5 0 0.630303 46 5 0.818182 54 5 0.763095 51 5 0.6449947 155 5 0.7083333 17 1 0.4000000 11 1 0.6866667 48 5 0.6887701 145 5 0.7552446 141 5 0.800000 54 5 0.4353247 57 5 0.4628070 94 5 0.7515127 113 5 0.4333333 11 0 0.355226 69 5 0.6635714 100 5 0.534127 64 5 0.692763 90 5 0.544906 124 5 0.2233333 29 1 0.7124183 91 5 0.743273 0.805265 0.6212963 0.802469 0.4626323 0.834697 0.521708 0.7743440 0.7436214 0.8740741 0.718240 0.7500000 0.7093483 0.709877 0.7444444 0.6712963 0.5066779 0.6216931 0.7901235 0.663815 0.490741 0.8888889 0.656285 0.780864 0.748545 0.6991844 0.893519 0.696274 0.7055556 0.718558 0.7872371 0.829966 0.4763348 0.4975092 0.76754838 0.49074074 0.4720681 0.6921737 0.579292 0.728740 0.5975516 0.2916667 0.7561123 0 0.6895093 0.700272 -0.0210042 5 0.559979 0.598179 -0.0382003 0.978380 5.1143e-01 insignificant 1 1.0000e+00 insignificant 0.998296 2.9235e-01 insignificant 1 1.0000000 insignificant -0.03250918 0.4979817 lowCoverage 1 lowCoverage 0.6900931 0.5833333 0.10714618 5 0.653309 0.482171 0.17113781 5.7730e-05 9.9962e-01 weaklyHypermeth 1.2829e-03 1.00000000 weaklyHypermeth 4.8533e-04 9.9999e-01 weaklyHypermeth 1.4274e-02 1.0000e+00 weaklyHypermeth 0.1404386 8.4121e-02 lowCoverage 1.0000e+00 lowCoverage 0.690416 0.6457286 0.0767459 5 0.683970 0.605698 0.0782724 2.1443e-02 5.9340e-01 weaklyHypermeth 0.8577314 1.0000e+00 insignificant 3.0250e-02 8.8919e-01 weaklyHypermeth 1.0000000 1.0000000 insignificant 0.11589158 0.26865460 lowCoverage 1.00000 lowCoverage 0.702186 0.5833333 0.1293289 5 0.697875 0.482171 0.21570477 9.4318e-05 9.9997e-01 weaklyHypermeth 2.1436e-03 1.0000000 weaklyHypermeth 1.5137e-04 1.0000e+00 weaklyHypermeth 5.2440e-03 1.0000000 weaklyHypermeth 0.1729478 4.2095e-02 lowCoverage 7.1348e-01 lowCoverage 0.702332 0.6457286 0.10437701 5 0.704117 0.605698 0.0984194 3.2106e-03 0.81007344 weaklyHypermeth 0.14410697 1.00000 insignificant 0.00526457 0.99637363 weaklyHypermeth 0.329036 1.00000 insignificant 0.14840076 0.17215290 lowCoverage 1.00000 lowCoverage 0.5846501 0.6457286 -0.0300124 5 0.578605 0.605698 -0.0270930 0.73399725 2.7326e-02 weaklyHypometh 1.00000 4.4797e-01 insignificant 0.9559604 8.5665e-02 insignificant 1.00000 1.0000e+00 insignificant -0.0245470 8.2606e-01 lowCoverage 1.0000e+00 lowCoverage chr8 103681750 103682750 31092 ODF1 ENSG00000155087 0.129953 629 13 0.067811 385 13 0.1227823 325 13 0.0474131 618 10 0.0787007 191 13 0.067480 651 10 0.0786623 390 13 0.058331 340 13 0.0416437 551 13 0.0391637 399 9 0.162252 383 13 0.029510 277 9 0.0400040 367 9 0.13029243 182 9 0.0248441 371 9 0.0304700 215 9 0.0635684 198 7 0.0358567 774 10 0.042070 286 10 0.031766 603 13 0.049378 93 8 0.103920 282 9 0.060268 274 13 0.029609 176 13 0.106638 545 13 0.1765484 512 13 0.0409359 268 9 0.0397959 168 8 0.0494363 276 13 0.1266192 279 10 0.1430277 470 13 0.064300 544 13 0.0000000 448 13 0.0064799 290 13 0.0019231 375 13 0.0060210 422 10 0.090154 193 11 0.0785001 576 13 0.044754 806 13 0.015333 594 13 0.010431 624 10 0.0159322 571 10 0.0129568 564 13 0.066912 0.074155 0.1451801 0.048231 0.1564145 0.092083 0.077132 0.0692520 0.0504067 0.0434789 0.097000 0.0517215 0.0469548 0.087580 0.0289143 0.0283232 0.0543191 0.0495364 0.0640286 0.036739 0.081138 0.0406217 0.069110 0.041226 0.068359 0.1958752 0.073037 0.029105 0.0614365 0.056683 0.0722062 0.084997 0.0000000 0.0104394 0.00410503 0.01140111 0.0864069 0.0141816 0.038411 0.022287 0.0141485 0.0112476 0.0198377 9 0.0625308 0.086229 -0.0204661 10 0.122326 0.173828 -0.0515023 0.991724 2.6493e-02 weaklyHypometh 1 1.0000e+00 insignificant 0.889855 7.4355e-01 insignificant 1 1.0000000 insignificant -0.01641101 0.3282244 insignificant 1 insignificant 0.0623767 0.0104212 0.05232865 10 0.074212 0.106317 -0.03210537 1.3549e-10 1.0000e+00 weaklyHypermeth 5.4195e-09 1.00000000 weaklyHypermeth 2.2107e-10 9.9574e-01 weaklyHypermeth 2.4564e-08 1.0000e+00 weaklyHypermeth 0.0356157 1.0257e-01 insignificant 1.0000e+00 insignificant 0.062292 0.0237417 0.0379932 10 0.051990 0.021123 0.0308662 1.2310e-04 1.0000e+00 weaklyHypermeth 0.0102581 1.0000e+00 weaklyHypermeth 4.7637e-05 1.0000e+00 weaklyHypermeth 0.0079394 1.0000000 weaklyHypermeth 0.04624733 0.00042659 weaklyHypermeth 0.20085 insignificant 0.085788 0.0099913 0.0759223 13 0.131770 0.072984 0.05878654 5.4891e-10 1.0000e+00 weaklyHypermeth 2.4951e-08 1.0000000 weaklyHypermeth 8.2079e-07 1.0000e+00 weaklyHypermeth 5.8628e-05 1.0000000 weaklyHypermeth 0.0520267 3.6366e-02 weaklyHypermeth 6.7853e-01 insignificant 0.085293 0.0237492 0.06106581 10 0.069754 0.022632 0.0471217 1.2193e-05 0.99999999 weaklyHypermeth 0.00101606 1.00000 weaklyHypermeth 0.00065077 0.99999633 weaklyHypermeth 0.072308 1.00000 weaklyHypermeth 0.06265834 0.00093177 weaklyHypermeth 0.28046 insignificant 0.0095652 0.0237567 -0.0155269 10 0.007289 0.024373 -0.0170841 0.99995772 7.9608e-04 weaklyHypometh 1.00000 2.4124e-02 weaklyHypometh 0.9999716 8.3281e-03 weaklyHypometh 1.00000 2.3134e-01 insignificant 0.0106316 5.8010e-01 insignificant 1.0000e+00 insignificant chr8 103682050 103683050 31093 ODF1 ENSG00000155087 0.063026 628 13 0.067811 385 13 0.1227823 325 13 0.0474131 618 10 0.0787007 191 13 0.067480 651 10 0.0786623 390 13 0.058331 340 13 0.0416437 551 13 0.0391637 399 9 0.162252 383 13 0.029510 277 9 0.0400040 367 9 0.13029243 182 9 0.0248441 371 9 0.0304700 215 9 0.0635684 198 7 0.0358567 774 10 0.042070 286 10 0.031766 603 13 0.049378 93 8 0.103920 282 9 0.060268 274 13 0.029609 176 13 0.106638 545 13 0.1891590 511 13 0.0409359 268 9 0.0397959 168 8 0.0494363 276 13 0.1032829 277 10 0.1430277 470 13 0.069246 543 13 0.0000000 448 13 0.0064799 290 13 0.0019231 375 13 0.0060210 422 10 0.090154 193 11 0.0785001 576 13 0.044754 806 13 0.015333 594 13 0.010431 624 10 0.0159322 571 10 0.0129568 564 13 0.066912 0.074155 0.1451801 0.048231 0.1564145 0.092083 0.077132 0.0692520 0.0504067 0.0434789 0.097000 0.0517215 0.0469548 0.087580 0.0289143 0.0283232 0.0543191 0.0495364 0.0640286 0.036739 0.081138 0.0406217 0.069110 0.041226 0.068359 0.1958752 0.073037 0.029105 0.0614365 0.056683 0.0722062 0.084997 0.0000000 0.0104394 0.00410503 0.01140111 0.0864069 0.0141816 0.038411 0.022287 0.0141485 0.0112476 0.0198377 9 0.0624154 0.086060 -0.0205878 10 0.076132 0.169819 -0.0936866 0.998869 1.6492e-02 weaklyHypometh 1 1.0000e+00 insignificant 0.931256 6.6578e-01 insignificant 1 1.0000000 insignificant -0.01927572 0.2498626 insignificant 1 insignificant 0.0623767 0.0104212 0.05232865 10 0.074212 0.106317 -0.03210537 1.3549e-10 1.0000e+00 weaklyHypermeth 5.4195e-09 1.00000000 weaklyHypermeth 2.2107e-10 9.9574e-01 weaklyHypermeth 2.4564e-08 1.0000e+00 weaklyHypermeth 0.0322694 1.3056e-01 insignificant 1.0000e+00 insignificant 0.062292 0.0237417 0.0379932 10 0.051990 0.021123 0.0308662 1.2310e-04 1.0000e+00 weaklyHypermeth 0.0102581 1.0000e+00 weaklyHypermeth 4.7637e-05 1.0000e+00 weaklyHypermeth 0.0079394 1.0000000 weaklyHypermeth 0.04290099 0.00061915 weaklyHypermeth 0.20085 insignificant 0.085788 0.0099913 0.0759223 13 0.131770 0.072984 0.05878654 5.4891e-10 1.0000e+00 weaklyHypermeth 2.4951e-08 1.0000000 weaklyHypermeth 8.2079e-07 1.0000e+00 weaklyHypermeth 5.8628e-05 1.0000000 weaklyHypermeth 0.0515451 3.8569e-02 weaklyHypermeth 6.7853e-01 insignificant 0.085293 0.0237492 0.06106581 10 0.069754 0.022632 0.0471217 1.2193e-05 0.99999999 weaklyHypermeth 0.00101606 1.00000 weaklyHypermeth 0.00065077 0.99999633 weaklyHypermeth 0.072308 1.00000 weaklyHypermeth 0.06217671 0.00112186 weaklyHypermeth 0.28046 insignificant 0.0095652 0.0237567 -0.0155269 10 0.007289 0.024373 -0.0170841 0.99995772 7.9608e-04 weaklyHypometh 1.00000 2.4124e-02 weaklyHypometh 0.9999716 8.3281e-03 weaklyHypometh 1.00000 2.3134e-01 insignificant 0.0106316 5.8010e-01 insignificant 1.0000e+00 insignificant chr8 103697850 103698850 31095 ODF1 ENSG00000155087 0.796526 90 5 0.747700 74 5 0.6984127 31 5 0.8878203 88 5 0.7407407 26 3 0.700029 161 5 0.8858974 33 2 0.749216 72 5 0.8664286 32 5 0.8160784 51 5 0.728000 127 5 0.400000 8 0 0.6729527 84 5 0.76000000 32 2 0.8456410 68 5 0.8333333 17 0 0.8000000 11 0 0.7453873 89 5 0.655703 97 5 0.676414 132 5 0.800000 19 2 0.842857 40 5 0.863736 71 5 0.552189 36 2 0.716667 19 0 0.6964082 107 5 0.5394249 63 4 0.9583333 26 2 0.7998039 43 2 0.7178422 105 5 0.8207174 63 5 0.803191 156 5 0.6258824 77 5 0.5798701 65 5 0.8452381 88 5 NA 0 0 0.663443 49 5 0.7748689 110 5 0.869444 73 5 0.810069 81 5 0.769048 88 5 0.8166667 49 5 0.7940936 94 5 0.804421 0.709463 0.7040149 0.856609 0.7647059 0.822408 0.880468 0.7444060 0.8747899 0.8169550 0.730588 0.4705882 0.6882831 0.747059 0.8598793 0.8235294 0.8235294 0.8405860 0.6718677 0.815223 0.823529 0.8380019 0.869101 0.796791 0.720588 0.8507272 0.764515 0.941176 0.8085928 0.730289 0.7544436 0.813943 0.6422145 0.5771581 0.79411765 NA 0.6544710 0.7744498 0.860294 0.808605 0.7619048 0.8284314 0.7925009 0 0.7777778 0.808824 -0.0301461 5 0.677657 0.670913 0.0067437 0.720887 8.4946e-02 insignificant 1 1.0000e+00 insignificant 0.600357 1.0199e-01 insignificant 1 1.0000000 insignificant -0.00895009 0.8368585 lowCoverage 1 lowCoverage 0.7779468 0.7017995 0.07446616 5 0.646653 0.781399 -0.13474629 6.3619e-02 9.9622e-01 insignificant 7.4846e-01 1.00000000 insignificant 3.9422e-02 9.7765e-01 weaklyHypermeth 6.2575e-01 1.0000e+00 insignificant 0.0524535 3.7354e-01 lowCoverage 1.0000e+00 lowCoverage 0.779985 0.8051948 -0.0239666 5 0.771981 0.802043 -0.0300625 6.6180e-01 1.2661e-01 insignificant 1.0000000 1.0000e+00 insignificant 7.0629e-01 1.8978e-01 insignificant 1.0000000 1.0000000 insignificant -0.06155029 0.04935318 lowCoverage 1.00000 lowCoverage 0.814614 0.7017995 0.1068621 5 0.803686 0.781399 0.02228656 1.8830e-03 9.8226e-01 weaklyHypermeth 3.1915e-02 1.0000000 weaklyHypermeth 5.8068e-03 9.9028e-01 weaklyHypermeth 1.3504e-01 1.0000000 insignificant 0.0614036 3.3764e-01 lowCoverage 1.0000e+00 lowCoverage 0.814560 0.8051948 0.01007047 5 0.798493 0.802043 -0.0035499 2.9767e-02 0.10409738 weaklyHypermeth 1.00000000 1.00000 insignificant 0.06507154 0.07293514 insignificant 1.000000 1.00000 insignificant -0.05260020 0.19892867 lowCoverage 1.00000 lowCoverage 0.7002584 0.8051948 -0.1017098 5 0.693959 0.802043 -0.1080844 0.99770988 6.0415e-04 weaklyHypometh 1.00000 1.9489e-02 weaklyHypometh 0.9998283 1.2720e-03 weaklyHypometh 1.00000 6.6945e-02 weaklyHypometh -0.1140038 7.9580e-02 lowCoverage 1.0000e+00 lowCoverage chr8 103766750 103767750 31097 KLF10 ENSG00000155090 0.910464 217 6 0.711531 127 6 0.7792981 195 6 0.9139540 199 6 0.8794351 108 6 0.932101 637 6 0.9103438 179 6 0.895906 98 6 0.8936508 114 6 0.9192331 111 6 0.889060 275 6 NA 0 0 0.9267547 106 6 0.94166667 105 6 0.9451058 184 6 0.8914474 70 6 NA 0 0 0.7902788 366 6 0.919272 448 6 0.952116 373 6 0.816811 117 6 NA 0 0 0.873270 245 6 0.948718 89 6 1.000000 22 4 0.9189628 262 6 0.8986652 112 6 0.9166667 60 6 0.9496804 296 6 0.9131546 148 6 0.9012471 263 6 0.926419 422 6 0.5657344 170 6 0.4354167 249 6 0.3722999 379 6 NA 0 0 0.216045 308 6 0.8789562 307 6 0.912370 450 6 0.776276 172 6 0.738047 217 6 0.7561647 305 6 0.9173859 190 6 0.915435 0.766638 0.7987659 0.921335 0.8791053 0.935948 0.920068 0.8904399 0.9140097 0.9203817 0.891211 NA 0.9326254 0.939855 0.9573269 0.9250572 NA 0.7562914 0.9282618 0.959678 0.836188 NA 0.874495 0.971014 1.000000 0.9197495 0.896563 0.920290 0.9605047 0.930507 0.9206561 0.932011 0.5786310 0.4272645 0.34453895 NA 0.2287559 0.9036964 0.913654 0.800104 0.7952313 0.7493527 0.9237646 4 0.8938890 0.921906 -0.0250102 6 0.890586 0.915642 -0.0250555 0.994227 5.8713e-02 insignificant 1 1.0000e+00 insignificant 0.987869 1.0143e-01 insignificant 1 1.0000000 insignificant -0.02589351 0.2200962 insignificant 1 insignificant 0.8938890 0.4769993 0.41458853 6 0.890586 0.483845 0.40674142 6.2684e-20 1.0000e+00 hypermethylated 5.6985e-18 1.00000000 hypermethylated 1.1753e-07 1.0000e+00 hypermethylated 8.3952e-06 1.0000e+00 hypermethylated 0.3952884 2.3211e-02 weaklyHypermeth 5.0459e-01 insignificant 0.893889 0.8455772 0.0522983 6 0.890586 0.837615 0.0529716 1.9123e-02 9.9803e-01 weaklyHypermeth 0.7967709 1.0000e+00 insignificant 1.4385e-02 9.9936e-01 weaklyHypermeth 0.7571180 1.0000000 insignificant 0.06892993 0.15893400 insignificant 1.00000 insignificant 0.921906 0.4769993 0.4446637 6 0.915642 0.483845 0.43179692 5.5475e-15 1.0000e+00 hypermethylated 4.2673e-13 1.0000000 hypermethylated 1.2969e-07 1.0000e+00 hypermethylated 1.0808e-05 1.0000000 hypermethylated 0.4211819 1.8915e-02 weaklyHypermeth 4.8501e-01 insignificant 0.921906 0.8455772 0.07687970 6 0.915642 0.837615 0.0780271 1.0975e-04 0.99999806 weaklyHypermeth 0.00783941 1.00000 weaklyHypermeth 0.00135967 0.99999563 weaklyHypermeth 0.111768 1.00000 insignificant 0.09482344 0.07111970 insignificant 1.00000 insignificant 0.4769993 0.8455772 -0.3683733 6 0.483845 0.837615 -0.3537699 0.99999922 2.1448e-05 hypomethylated 1.00000 8.9367e-04 hypomethylated 0.9999645 4.7953e-03 weaklyHypometh 1.00000 1.7760e-01 insignificant -0.3263584 4.0050e-02 weaklyHypometh 8.3437e-01 insignificant chr8 103766950 103767950 31098 KLF10 ENSG00000155090 0.910464 217 6 0.711531 127 6 0.7792981 195 6 0.9139540 199 6 0.8794351 108 6 0.941801 638 6 0.9103438 179 6 0.895906 98 6 0.8936508 114 6 0.9192331 111 6 0.889060 275 6 NA 0 0 0.9267547 106 6 0.94166667 105 6 0.9451058 184 6 0.8914474 70 6 NA 0 0 0.7902788 366 6 0.919272 448 6 0.952116 373 6 0.816811 117 6 NA 0 0 0.873270 245 6 0.948718 89 6 1.000000 22 4 0.9189628 262 6 0.8986652 112 6 0.9166667 60 6 0.9496804 296 6 0.9131546 148 6 0.9153547 264 6 0.926419 422 6 0.5657344 170 6 0.4354167 249 6 0.3722999 379 6 NA 0 0 0.216045 308 6 0.8789562 307 6 0.912370 450 6 0.776276 172 6 0.775469 218 6 0.7561647 305 6 0.9173859 190 6 0.915435 0.766638 0.7987659 0.921335 0.8791053 0.935948 0.920068 0.8904399 0.9140097 0.9203817 0.891211 NA 0.9326254 0.939855 0.9573269 0.9250572 NA 0.7562914 0.9282618 0.959678 0.836188 NA 0.874495 0.971014 1.000000 0.9197495 0.896563 0.920290 0.9605047 0.930507 0.9206561 0.932011 0.5786310 0.4272645 0.34453895 NA 0.2287559 0.9036964 0.913654 0.800104 0.7952313 0.7493527 0.9237646 4 0.8938890 0.921906 -0.0250102 6 0.890586 0.915642 -0.0250555 0.994227 5.8713e-02 insignificant 1 1.0000e+00 insignificant 0.987869 1.0143e-01 insignificant 1 1.0000000 insignificant -0.02663713 0.2080750 insignificant 1 insignificant 0.8938890 0.4769993 0.41458853 6 0.890586 0.483845 0.40674142 6.2684e-20 1.0000e+00 hypermethylated 5.6985e-18 1.00000000 hypermethylated 1.1753e-07 1.0000e+00 hypermethylated 8.3952e-06 1.0000e+00 hypermethylated 0.3958272 2.3099e-02 weaklyHypermeth 5.0459e-01 insignificant 0.893889 0.8455772 0.0522983 6 0.890586 0.837615 0.0529716 1.9123e-02 9.9803e-01 weaklyHypermeth 0.7967709 1.0000e+00 insignificant 1.4385e-02 9.9936e-01 weaklyHypermeth 0.7571180 1.0000000 insignificant 0.06198444 0.16676967 insignificant 1.00000 insignificant 0.921906 0.4769993 0.4446637 6 0.915642 0.483845 0.43179692 5.5475e-15 1.0000e+00 hypermethylated 4.2673e-13 1.0000000 hypermethylated 1.2969e-07 1.0000e+00 hypermethylated 1.0808e-05 1.0000000 hypermethylated 0.4224644 1.8730e-02 weaklyHypermeth 4.8501e-01 insignificant 0.921944 0.8456929 0.07684196 6 0.927693 0.860813 0.0668803 3.7939e-04 0.99999990 weaklyHypermeth 0.02529289 1.00000 weaklyHypermeth 0.00394168 0.99999975 weaklyHypermeth 0.262779 1.00000 insignificant 0.08862157 0.06690524 insignificant 1.00000 insignificant 0.4769993 0.8455772 -0.3683733 6 0.483845 0.837615 -0.3537699 0.99999922 2.1448e-05 hypomethylated 1.00000 8.9367e-04 hypomethylated 0.9999645 4.7953e-03 weaklyHypometh 1.00000 1.7760e-01 insignificant -0.3338428 3.7408e-02 weaklyHypometh 7.9591e-01 insignificant chr8 103819750 103820750 31107 KLF10 ENSG00000155090 0.707546 189 10 0.644307 196 10 0.3824102 142 9 0.8189056 276 10 0.6626547 112 10 0.751808 231 10 0.5455861 64 6 0.608550 149 10 0.7266762 101 10 0.8258939 124 10 0.831125 162 10 0.751691 100 10 0.3469805 220 10 0.72222222 42 4 0.7360606 128 6 0.6256410 35 1 0.5201581 83 6 0.5465463 262 10 0.477917 105 3 0.686718 191 10 0.703208 80 9 0.470827 174 9 0.781736 133 10 0.483024 75 8 0.781680 83 10 0.7003405 197 10 0.4441428 155 10 0.5771270 84 7 0.7539469 141 5 0.5612948 112 10 0.6330014 184 10 0.674916 281 10 0.3875469 196 10 0.4030702 86 2 0.2800725 117 1 0.6611111 45 6 0.348535 115 10 0.7730121 171 10 0.774719 205 10 0.746970 170 10 0.659405 154 4 0.7732505 152 7 0.7088917 208 10 0.724618 0.633224 0.4100468 0.837842 0.6636209 0.843031 0.545006 0.6234764 0.7066330 0.8293312 0.803839 0.7511832 0.3572005 0.705940 0.7211967 0.8394139 0.5496358 0.4981773 0.4841582 0.673374 0.866238 0.4486262 0.774976 0.458962 0.750421 0.7102571 0.605381 0.680983 0.7640036 0.640237 0.6398699 0.687165 0.3479208 0.3767700 0.29711984 0.56260575 0.2982234 0.7667453 0.754754 0.767759 0.6770108 0.7590679 0.7008792 2 0.6569368 0.646190 0.0121582 10 0.526119 0.573020 -0.0469007 0.653663 6.9814e-01 insignificant 1 1.0000e+00 insignificant 0.835294 6.9913e-01 insignificant 1 1.0000000 insignificant 0.01553286 0.7435225 insignificant 1 insignificant 0.6571625 0.4547945 0.20950264 10 0.566590 0.493134 0.07345528 2.7106e-06 1.0000e+00 hypermethylated 6.9504e-05 1.00000000 hypermethylated 9.1300e-05 1.0000e+00 hypermethylated 3.1483e-03 1.0000e+00 hypermethylated 0.1704120 8.8984e-02 insignificant 1.0000e+00 insignificant 0.657831 0.7311586 -0.0693818 10 0.669900 0.728580 -0.0586801 8.5227e-01 3.3297e-02 weaklyHypometh 1.0000000 1.0000e+00 insignificant 9.0733e-01 1.5830e-02 weaklyHypometh 1.0000000 1.0000000 insignificant -0.08667725 0.03420394 weaklyHypometh 1.00000 insignificant 0.646919 0.4547945 0.1987313 10 0.586329 0.493134 0.09319447 2.9009e-06 9.9987e-01 weaklyHypermeth 8.0580e-05 1.0000000 weaklyHypermeth 6.5781e-05 9.9992e-01 weaklyHypermeth 2.9765e-03 1.0000000 weaklyHypermeth 0.1548791 1.1830e-01 insignificant 1.0000e+00 insignificant 0.650060 0.7311586 -0.07755107 10 0.652227 0.728580 -0.0763525 9.9396e-01 0.00214488 weaklyHypometh 1.00000000 0.71496 insignificant 0.96184255 0.01207104 weaklyHypometh 1.000000 1.00000 insignificant -0.10221011 0.02593619 weaklyHypometh 1.00000 insignificant 0.4537931 0.7311586 -0.2789683 10 0.474408 0.728580 -0.2541720 1.00000000 1.7778e-07 hypomethylated 1.00000 1.2699e-05 hypomethylated 1.0000000 3.5681e-05 hypomethylated 1.00000 3.8107e-03 hypomethylated -0.2570893 2.2008e-02 weaklyHypometh 5.9481e-01 insignificant chr8 103887350 103888350 31118 ENSG00000217620 0.015391 922 41 0.027241 992 39 0.0159044 1513 42 0.0091849 550 18 0.0162502 1069 42 0.032524 956 40 0.0085792 1660 42 0.040184 910 42 0.0092788 1267 43 0.0053572 1357 41 0.024623 1279 40 0.015676 1556 39 0.0096609 1119 40 0.00000000 92 3 0.0103370 1354 41 0.0066237 1374 41 0.0186290 1366 40 0.0013228 619 19 0.018879 931 41 0.020642 948 36 0.029191 355 22 0.012704 537 26 0.057451 823 37 0.034153 348 31 0.025002 315 12 0.0155173 1252 42 0.0305821 516 30 0.0294080 330 27 0.0211229 739 40 0.0214368 691 35 0.0098910 1120 41 0.015424 1242 41 0.0084339 839 40 0.0146658 872 39 0.1923077 299 11 0.0131579 380 16 0.040147 289 27 0.0112895 975 40 0.014452 1054 34 0.018979 952 37 0.026616 680 25 0.0037934 856 22 0.0099335 813 22 0.019995 0.033464 0.0218931 0.016816 0.0246369 0.038007 0.016548 0.0143423 0.0144346 0.0095005 0.033783 0.0263257 0.0125577 NA 0.0158890 0.0142565 0.0321973 0.0070454 0.0204531 0.021850 0.040124 0.0104526 0.044350 0.038163 0.029946 0.0206753 0.035905 0.025325 0.0361076 0.021807 0.0149322 0.019752 0.0150673 0.0139418 0.11071017 0.00326793 0.0296638 0.0101250 0.016231 0.020024 0.0157287 0.0084122 0.0212793 12 0.0135110 0.020077 -0.0029478 39 0.020803 0.019148 0.0016549 0.630965 2.5641e-01 insignificant 1 1.0000e+00 insignificant 0.631753 8.4174e-01 insignificant 1 1.0000000 insignificant -0.00984253 0.0347510 weaklyHypometh 1 insignificant 0.0135110 0.0131363 0.00207718 38 0.020803 0.018418 0.00238513 2.4011e-01 8.8737e-01 insignificant 1.0000e+00 1.00000000 insignificant 2.2111e-01 9.9950e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0313526 3.3730e-01 insignificant 1.0000e+00 insignificant 0.013511 0.0114811 0.0062165 27 0.020803 0.013288 0.0075146 3.7308e-02 9.3424e-01 weaklyHypermeth 1.0000000 1.0000e+00 insignificant 1.2409e-01 9.9547e-01 insignificant 1.0000000 1.0000000 insignificant 0.00055950 0.90465083 insignificant 1.00000 insignificant 0.020077 0.0131363 0.0054711 38 0.019148 0.018418 0.00073020 7.1962e-01 9.8028e-01 insignificant 1.0000e+00 1.0000000 insignificant 7.2663e-01 9.9994e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0215101 5.0089e-01 insignificant 1.0000e+00 insignificant 0.020077 0.0114811 0.00885481 27 0.019148 0.013288 0.0058597 5.7510e-01 0.99400789 insignificant 1.00000000 1.00000 insignificant 0.72163111 0.99971197 insignificant 1.000000 1.00000 insignificant 0.01040203 0.07780214 insignificant 1.00000 insignificant 0.0131363 0.0114811 0.0017111 26 0.018418 0.013288 0.0051295 0.99704154 9.9875e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9999575 9.9959e-01 insignificant 1.00000 1.0000e+00 insignificant 0.0319121 3.3101e-01 insignificant 1.0000e+00 insignificant chr8 103887450 103888450 31119 ENSG00000217620 0.012487 1267 51 0.022101 1489 49 0.0133228 2083 52 0.0073479 889 28 0.0132637 1724 52 0.025899 1391 50 0.0076828 2395 52 0.033062 1536 52 0.0080455 2027 53 0.0053636 2185 51 0.021084 1835 50 0.013494 2285 49 0.0078381 1779 50 0.00092764 467 8 0.0098510 2213 51 0.0063546 2198 51 0.0160080 1812 50 0.0012715 1069 28 0.015317 1342 51 0.016747 1282 46 0.023728 493 32 0.028635 736 34 0.047210 1217 47 0.027828 475 40 0.022342 443 17 0.0129455 1896 52 0.0443808 872 40 0.0252993 590 37 0.0170652 1048 50 0.0172335 948 45 0.0079889 1607 51 0.012784 1591 51 0.0068426 1204 50 0.0127867 1224 49 0.1562500 408 17 0.0104167 430 20 0.033666 438 37 0.0091594 1400 50 0.011930 1478 44 0.015398 1160 47 0.021687 919 30 0.0037420 1153 27 0.0083019 1195 29 0.012513 0.020943 0.0139682 0.010524 0.0155925 0.023786 0.011511 0.0092687 0.0099305 0.0070750 0.022805 0.0185385 0.0078589 0.010576 0.0121623 0.0095464 0.0219817 0.0051339 0.0128000 0.013674 0.028469 0.0065415 0.030635 0.023883 0.018802 0.0146503 0.026167 0.023361 0.0246355 0.013648 0.0093449 0.013501 0.0094295 0.0092905 0.07042556 0.00204515 0.0242658 0.0063365 0.011055 0.012531 0.0098434 0.0075914 0.0140657 17 0.0098593 0.015279 -0.0024487 49 0.017244 0.021925 -0.0046810 0.426018 2.4209e-01 insignificant 1 1.0000e+00 insignificant 0.527532 8.8915e-01 insignificant 1 1.0000000 insignificant -0.01107999 0.0115884 weaklyHypometh 1 insignificant 0.0098593 0.0101881 0.00166558 48 0.017244 0.015230 0.00201405 2.4109e-01 9.3587e-01 insignificant 1.0000e+00 1.00000000 insignificant 2.6904e-01 9.9990e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0253135 3.3956e-01 insignificant 1.0000e+00 insignificant 0.009860 0.0091448 0.0039469 32 0.017564 0.011088 0.0064759 3.1839e-02 9.3901e-01 weaklyHypermeth 1.0000000 1.0000e+00 insignificant 1.3964e-01 9.9355e-01 insignificant 1.0000000 1.0000000 insignificant 0.00066166 0.85759621 insignificant 1.00000 insignificant 0.015279 0.0101881 0.0042292 48 0.021925 0.015230 0.00669502 8.5321e-01 9.8251e-01 insignificant 1.0000e+00 1.0000000 insignificant 8.7824e-01 9.9997e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0142335 5.8092e-01 insignificant 1.0000e+00 insignificant 0.015199 0.0091448 0.00704454 32 0.016158 0.011088 0.0050707 8.0408e-01 0.99980723 insignificant 1.00000000 1.00000 insignificant 0.92542205 0.99999103 insignificant 1.000000 1.00000 insignificant 0.01174164 0.02471184 weaklyHypermeth 1.00000 insignificant 0.0101901 0.0091448 0.0013785 31 0.015512 0.011088 0.0044245 0.99777063 9.9947e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9999908 9.9990e-01 insignificant 1.00000 1.0000e+00 insignificant 0.0259751 3.2960e-01 insignificant 1.0000e+00 insignificant chr8 103891850 103892850 31122 ENSG00000217620 0.060825 1213 28 0.101187 975 36 0.0034525 1567 40 0.0384806 691 14 0.0097879 1472 36 0.068392 1050 33 0.0077272 1825 40 0.043704 921 42 0.0115355 1215 43 0.0441930 1305 40 0.022557 1693 36 0.017105 1707 41 0.0326538 1144 37 0.05030602 431 19 0.0782867 1761 36 0.0076481 2362 41 0.0085585 1131 29 0.0440810 1691 28 0.016219 1201 36 0.025231 1046 41 0.031820 472 34 0.103083 353 23 0.026116 912 36 0.064527 690 37 0.116667 285 20 0.0042999 1514 36 0.0078592 712 35 0.0686272 410 36 0.0244048 996 36 0.0426231 669 34 0.0367714 1561 36 0.088453 936 36 0.0194280 971 36 0.0624416 1334 36 0.0526454 817 28 0.0299145 101 5 0.047787 473 32 0.0569855 1298 31 0.042603 978 29 0.081905 1161 35 0.029826 587 14 0.0262221 1531 22 0.0023460 787 33 0.018652 0.015880 0.0050837 0.016221 0.0133645 0.011957 0.012530 0.0047308 0.0031452 0.0071576 0.010754 0.0087838 0.0106911 0.013581 0.0128504 0.0109221 0.0081973 0.0124932 0.0092219 0.013917 0.023226 0.0303586 0.015212 0.011284 0.012534 0.0137625 0.010114 0.025813 0.0104090 0.013296 0.0088827 0.019633 0.0104255 0.0062105 0.10299827 0.00019036 0.0268203 0.0121962 0.012793 0.015045 0.0095429 0.0044828 0.0023095 13 0.0101542 0.015773 -0.0022890 36 0.069736 0.049358 0.0203777 0.159497 7.1558e-01 insignificant 1 1.0000e+00 insignificant 0.350036 9.9318e-01 insignificant 1 1.0000000 insignificant -0.01667445 0.1893155 insignificant 1 insignificant 0.0101940 0.0178214 -0.00435456 35 0.081362 0.045675 0.03568740 3.3526e-01 9.6727e-01 insignificant 1.0000e+00 1.00000000 insignificant 5.7667e-01 1.0000e+00 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0102705 2.7869e-01 insignificant 1.0000e+00 insignificant 0.010158 0.0085250 0.0024569 31 0.073426 0.044890 0.0285367 3.4087e-01 9.3999e-01 insignificant 1.0000000 1.0000e+00 insignificant 5.6353e-01 9.9981e-01 insignificant 1.0000000 1.0000000 insignificant -0.00198395 0.89500195 insignificant 1.00000 insignificant 0.015586 0.0178250 -0.0023822 35 0.046809 0.046521 0.00028817 9.9795e-01 9.9999e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.9952e-01 1.0000e+00 insignificant 1.0000e+00 1.0000000 insignificant 0.0064040 6.1916e-01 insignificant 1.0000e+00 insignificant 0.015803 0.0085284 0.00404478 27 0.055165 0.046650 0.0085146 9.8404e-01 0.98462921 insignificant 1.00000000 1.00000 insignificant 0.99028718 0.99947528 insignificant 1.000000 1.00000 insignificant 0.01469051 0.40468345 insignificant 1.00000 insignificant 0.0174524 0.0079397 0.0092857 27 0.034261 0.028146 0.0061150 0.99219215 9.9919e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9999821 9.9997e-01 insignificant 1.00000 1.0000e+00 insignificant 0.0082866 5.9401e-01 insignificant 1.0000e+00 insignificant chr8 116729350 116730350 31300 ENSG00000206719 0.084586 416 13 0.051650 497 14 0.1046422 597 14 0.0737628 157 7 0.0871769 208 7 0.046415 351 7 0.1415190 411 7 0.106446 266 7 0.0891379 443 7 0.0661309 440 7 0.080942 308 7 0.057972 404 7 0.0347861 252 7 NA 0 0 0.0362609 375 7 0.0752720 348 7 0.0282729 429 7 0.0517857 94 7 0.033149 147 7 0.043583 437 13 0.192857 54 6 0.015873 81 7 0.079635 401 14 0.054270 109 7 0.085034 29 4 0.0697547 511 14 0.0530386 132 7 0.0084034 69 6 0.0869801 249 7 0.0188478 621 14 0.0234247 600 14 0.171496 540 7 0.0063336 386 14 0.0117057 189 7 0.0000000 119 7 0.0057143 118 7 0.252237 65 7 0.0028611 605 14 0.026667 440 7 0.025624 320 14 0.053246 236 7 0.0050783 312 7 0.0814103 177 7 0.057730 0.053929 0.1279086 0.053898 0.0835728 0.091335 0.144502 0.1049105 0.0903409 0.0679406 0.079731 0.0575690 0.0355442 NA 0.0350995 0.0741074 0.0279067 0.0324074 0.0349025 0.032036 0.196154 0.0142450 0.103187 0.057691 0.092593 0.1111607 0.058026 0.013575 0.0881965 0.018158 0.0362157 0.091513 0.0151951 0.0136495 0.00000000 0.00923077 0.2381881 0.0062739 0.045743 0.019084 0.0249015 0.0058723 0.0528727 7 0.0703647 0.065371 0.0021999 7 0.070412 0.055777 0.0146353 0.274777 9.5767e-01 insignificant 1 1.0000e+00 insignificant 0.248857 8.6215e-01 insignificant 1 1.0000000 insignificant -0.00355612 0.8486737 insignificant 1 insignificant 0.0703647 0.0195682 0.04972336 7 0.070412 0.012124 0.05828809 6.1380e-09 1.0000e+00 weaklyHypermeth 1.9800e-07 1.00000000 weaklyHypermeth 7.2932e-06 1.0000e+00 weaklyHypermeth 3.1710e-04 1.0000e+00 weaklyHypermeth 0.0216033 6.2581e-01 insignificant 1.0000e+00 insignificant 0.070365 0.0303030 0.0396205 7 0.070412 0.049311 0.0211018 1.3598e-05 9.9541e-01 weaklyHypermeth 0.0013598 1.0000e+00 weaklyHypermeth 7.4077e-05 9.9952e-01 weaklyHypermeth 0.0082308 1.0000000 weaklyHypermeth 0.02967335 0.09041503 insignificant 1.00000 insignificant 0.065371 0.0195682 0.0458918 13 0.055777 0.012124 0.04365277 4.1375e-05 9.9999e-01 weaklyHypermeth 9.8511e-04 1.0000000 weaklyHypermeth 7.1908e-03 1.0000e+00 weaklyHypermeth 1.5632e-01 1.0000000 insignificant 0.0251594 5.9044e-01 insignificant 1.0000e+00 insignificant 0.065371 0.0303030 0.03856420 7 0.055777 0.049311 0.0064665 3.3145e-03 0.98461899 weaklyHypermeth 0.14410697 1.00000 insignificant 0.01916129 0.99606818 weaklyHypermeth 0.776006 1.00000 insignificant 0.03322947 0.14424614 insignificant 1.00000 insignificant 0.0195682 0.0303030 -0.0084763 7 0.012124 0.049311 -0.0371863 0.99909373 6.8928e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9990335 5.7803e-01 insignificant 1.00000 1.0000e+00 insignificant 0.0080701 8.5811e-01 insignificant 1.0000e+00 insignificant chr8 116729550 116730550 31301 ENSG00000206719 0.084586 416 13 0.051650 497 14 0.1046422 597 14 0.0737628 157 7 0.0871769 208 7 0.046415 351 7 0.1415190 411 7 0.106446 266 7 0.0891379 443 7 0.0661309 440 7 0.080942 308 7 0.057972 404 7 0.0347861 252 7 NA 0 0 0.0362609 375 7 0.0752720 348 7 0.0282729 429 7 0.0517857 94 7 0.033149 147 7 0.043583 437 13 0.192857 54 6 0.015873 81 7 0.079635 401 14 0.054270 109 7 0.085034 29 4 0.0697547 511 14 0.0530386 132 7 0.0084034 69 6 0.0869801 249 7 0.0188478 621 14 0.0234247 600 14 0.171496 540 7 0.0063336 386 14 0.0117057 189 7 0.0000000 119 7 0.0057143 118 7 0.252237 65 7 0.0028611 605 14 0.026667 440 7 0.025624 320 14 0.053246 236 7 0.0050783 312 7 0.0814103 177 7 0.057730 0.053929 0.1279086 0.053898 0.0835728 0.091335 0.144502 0.1049105 0.0903409 0.0679406 0.079731 0.0575690 0.0355442 NA 0.0350995 0.0741074 0.0279067 0.0324074 0.0349025 0.032036 0.196154 0.0142450 0.103187 0.057691 0.092593 0.1111607 0.058026 0.013575 0.0881965 0.018158 0.0362157 0.091513 0.0151951 0.0136495 0.00000000 0.00923077 0.2381881 0.0062739 0.045743 0.019084 0.0249015 0.0058723 0.0528727 7 0.0703647 0.065371 0.0021999 7 0.070412 0.055777 0.0146353 0.274777 9.5767e-01 insignificant 1 1.0000e+00 insignificant 0.248857 8.6215e-01 insignificant 1 1.0000000 insignificant -0.00355612 0.8486737 insignificant 1 insignificant 0.0703647 0.0195682 0.04972336 7 0.070412 0.012124 0.05828809 6.1380e-09 1.0000e+00 weaklyHypermeth 1.9800e-07 1.00000000 weaklyHypermeth 7.2932e-06 1.0000e+00 weaklyHypermeth 3.1710e-04 1.0000e+00 weaklyHypermeth 0.0216033 6.2581e-01 insignificant 1.0000e+00 insignificant 0.070365 0.0303030 0.0396205 7 0.070412 0.049311 0.0211018 1.3598e-05 9.9541e-01 weaklyHypermeth 0.0013598 1.0000e+00 weaklyHypermeth 7.4077e-05 9.9952e-01 weaklyHypermeth 0.0082308 1.0000000 weaklyHypermeth 0.02967335 0.09041503 insignificant 1.00000 insignificant 0.065371 0.0195682 0.0458918 13 0.055777 0.012124 0.04365277 4.1375e-05 9.9999e-01 weaklyHypermeth 9.8511e-04 1.0000000 weaklyHypermeth 7.1908e-03 1.0000e+00 weaklyHypermeth 1.5632e-01 1.0000000 insignificant 0.0251594 5.9044e-01 insignificant 1.0000e+00 insignificant 0.065371 0.0303030 0.03856420 7 0.055777 0.049311 0.0064665 3.3145e-03 0.98461899 weaklyHypermeth 0.14410697 1.00000 insignificant 0.01916129 0.99606818 weaklyHypermeth 0.776006 1.00000 insignificant 0.03322947 0.14424614 insignificant 1.00000 insignificant 0.0195682 0.0303030 -0.0084763 7 0.012124 0.049311 -0.0371863 0.99909373 6.8928e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9990335 5.7803e-01 insignificant 1.00000 1.0000e+00 insignificant 0.0080701 8.5811e-01 insignificant 1.0000e+00 insignificant chr8 117700350 117701350 31321 ENSG00000221793 0.651796 193 7 0.843537 80 4 0.6523810 35 4 0.7711131 154 7 0.8214286 90 7 0.843838 62 4 0.6260265 98 7 0.758120 65 6 0.8055556 48 6 0.7632653 53 6 0.876542 99 4 0.670635 53 6 0.8615048 148 7 0.89388857 94 6 0.7536178 83 7 0.7507937 59 6 0.7401282 76 3 0.8270221 212 7 0.505556 32 2 0.745265 46 4 0.833333 8 0 0.785714 17 0 0.777041 118 6 0.789683 38 3 0.875988 79 4 0.7222222 48 4 0.7579932 48 6 0.6428571 15 0 0.8214703 82 7 0.6604555 45 4 0.8809028 45 4 0.566327 40 4 0.6143678 127 6 0.6317460 55 4 0.8571429 44 4 0.8095238 21 3 0.726786 70 7 0.8198758 50 4 0.768295 99 7 0.707213 115 4 0.784014 116 7 0.7611111 118 6 0.6755451 115 7 0.756865 0.745421 0.6886447 0.768284 0.7994505 0.769985 0.701120 0.8468583 0.8378510 0.7566719 0.808565 0.7493895 0.8593700 0.906779 0.7589268 0.8296703 0.7858121 0.8272270 0.6401099 0.847736 0.931069 0.7490842 0.804356 0.927394 0.815565 0.7549451 0.697541 0.763736 0.8725339 0.810240 0.7950244 0.680534 0.6704560 0.7735043 0.79905808 0.79077803 0.7520604 0.7419374 0.824065 0.797546 0.7766876 0.8260073 0.7093413 0 0.7705287 0.794168 -0.0094045 4 0.713831 0.715112 -0.0012811 0.629830 3.3264e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.941788 3.4028e-01 lowCoverage 1 1.0000000 lowCoverage -0.00139824 0.9687368 lowCoverage 1 lowCoverage 0.7718007 0.7247956 0.06107329 4 0.774925 0.700268 0.07465688 1.4962e-02 9.9789e-01 lowCoverage 1.9687e-01 1.00000000 lowCoverage 2.2003e-01 8.6017e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0148603 7.6100e-01 lowCoverage 1.0000e+00 lowCoverage 0.771801 0.7708703 0.0137196 7 0.774925 0.749424 0.0255012 3.3008e-01 7.1514e-01 insignificant 1.0000000 1.0000e+00 insignificant 2.3105e-01 7.4645e-01 insignificant 1.0000000 1.0000000 insignificant 0.01886512 0.53860593 insignificant 1.00000 insignificant 0.795848 0.7247956 0.0741545 4 0.776572 0.700268 0.07630395 1.3163e-02 9.8392e-01 lowCoverage 1.8805e-01 1.0000000 lowCoverage 1.2833e-01 9.4067e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 0.0162586 7.5310e-01 lowCoverage 1.0000e+00 lowCoverage 0.795848 0.7708703 0.01549947 4 0.776572 0.749424 0.0271482 4.8978e-01 0.79515392 lowCoverage 1.00000000 1.00000 lowCoverage 0.31665608 0.95058832 lowCoverage 1.000000 1.00000 lowCoverage 0.02026336 0.56606734 lowCoverage 1.00000 lowCoverage 0.7247956 0.7708703 -0.0592558 4 0.700268 0.749424 -0.0491557 0.97563438 1.0221e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.8167597 3.4214e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.0040048 9.3387e-01 lowCoverage 1.0000e+00 lowCoverage chr8 124469950 124470950 31486 MIR548D1 ENSG00000207704 0.762290 194 7 0.741608 133 7 0.7151912 52 6 0.8118826 167 7 0.7122923 62 7 0.779904 287 7 0.6837585 49 4 0.758233 144 7 0.8518849 74 6 0.7904762 47 5 0.767179 223 7 0.550000 13 0 0.9345093 94 6 0.76082251 52 6 0.7499382 55 6 0.8000000 9 0 0.2500000 12 0 0.8341224 170 7 0.809281 99 6 0.804586 215 7 0.760714 56 6 0.792032 79 6 0.744575 111 7 0.753403 95 7 0.885065 58 4 0.7707201 174 7 0.6165224 58 4 0.6354978 35 4 0.8101736 127 7 0.5525580 197 7 0.8367579 197 7 0.752571 277 7 0.7215822 119 7 0.7655837 97 7 0.7573554 228 7 0.5277778 20 1 0.797902 84 7 0.8191414 218 7 0.826786 65 7 0.822232 170 7 0.805730 183 7 0.8406926 47 7 0.8258646 104 6 0.869051 0.767100 0.7803137 0.868313 0.7915783 0.836544 0.754360 0.7945367 0.8189024 0.8383469 0.819477 0.5572540 0.9051396 0.816519 0.7893535 0.8129387 0.3734229 0.8824871 0.7990294 0.859209 0.911653 0.8320831 0.794909 0.857550 0.893939 0.8130622 0.746222 0.660410 0.8765129 0.850953 0.8402146 0.838743 0.8033373 0.8043660 0.77999797 0.58763811 0.8239450 0.8620052 0.866159 0.864978 0.8581038 0.8569106 0.8666629 2 0.8218605 0.828767 -0.0088341 7 0.853014 0.675306 0.1777088 0.753277 9.1240e-01 insignificant 1 1.0000e+00 insignificant 0.714735 8.7468e-01 insignificant 1 1.0000000 insignificant 0.00084876 0.9838216 insignificant 1 insignificant 0.8216292 0.8107050 0.00165184 7 0.774646 0.775337 -0.00069130 4.8855e-01 2.0110e-01 insignificant 1.0000e+00 1.00000000 insignificant 8.0249e-01 3.5915e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0118408 8.2737e-01 insignificant 1.0000e+00 insignificant 0.821629 0.8435852 -0.0437135 7 0.774646 0.820049 -0.0454030 9.9206e-01 9.8679e-03 weaklyHypometh 1.0000000 8.2233e-01 insignificant 9.9690e-01 1.5256e-03 weaklyHypometh 1.0000000 0.3051195 insignificant -0.08086295 0.01812265 weaklyHypometh 0.82376 insignificant 0.831259 0.8107050 0.0136445 7 0.789853 0.775337 0.01451609 2.4734e-01 3.4675e-01 insignificant 1.0000e+00 1.0000000 insignificant 3.0004e-01 3.1014e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0109920 8.3449e-01 insignificant 1.0000e+00 insignificant 0.831259 0.8435852 -0.03017452 7 0.789853 0.820049 -0.0301956 9.0530e-01 0.01569050 weaklyHypometh 1.00000000 1.00000 insignificant 0.82774207 0.00358322 weaklyHypometh 1.000000 0.97407 insignificant -0.08171171 0.01357923 weaklyHypometh 1.00000 insignificant 0.8107050 0.8435852 -0.0397271 7 0.775337 0.820049 -0.0447117 0.75530146 2.9059e-02 weaklyHypometh 1.00000 4.6126e-01 insignificant 0.9494307 5.1062e-02 insignificant 1.00000 9.2841e-01 insignificant -0.0927037 8.3853e-02 insignificant 1.0000e+00 insignificant chr8 125700850 125701850 31558 MTSS1 ENSG00000170873 0.759091 69 5 0.690458 108 5 0.5132035 72 5 0.5842491 88 5 0.5773304 78 5 0.627541 216 5 0.5912442 104 5 0.594517 71 5 0.6428571 70 5 0.6629293 69 5 0.657245 166 5 0.598413 76 5 0.6611111 79 5 NA 0 0 0.6550000 74 3 0.4722944 45 3 0.6437681 78 5 0.7083333 82 5 0.567763 61 4 0.704741 193 5 0.770000 20 2 0.524224 71 5 0.755409 72 5 0.702857 36 4 0.636667 18 1 0.6840909 98 5 0.7509091 39 5 0.7638889 30 3 0.7045083 92 5 0.7002517 80 5 0.6871462 141 5 0.695852 277 5 0.6316251 121 5 0.4515873 77 5 0.6470686 93 5 0.5233333 21 2 0.646919 55 4 0.6192828 130 5 0.644778 89 5 0.788859 80 5 0.640007 72 5 0.7601708 75 5 0.7614286 52 5 0.678186 0.624952 0.4314344 0.525810 0.5116591 0.563382 0.507158 0.5609898 0.5918609 0.6063257 0.594282 0.5679412 0.5762411 NA 0.5433806 0.4613613 0.5270120 0.6994681 0.4855279 0.642265 0.693972 0.4882898 0.677287 0.595137 0.556265 0.6154148 0.651838 0.680457 0.6367513 0.617856 0.6366571 0.642069 0.5659358 0.4143307 0.57449277 0.43250591 0.5595298 0.5483686 0.609775 0.713061 0.6044219 0.7557184 0.7023472 2 0.5875486 0.648871 -0.0621132 5 0.636955 0.701453 -0.0644982 0.999906 3.5894e-04 weaklyHypometh 1 8.9736e-02 weaklyHypometh 0.999657 2.2199e-04 weaklyHypometh 1 0.0888965 weaklyHypometh -0.07103156 0.0093396 lowCoverage 1 lowCoverage 0.5875486 0.5492958 0.03631088 5 0.636955 0.604796 0.03215846 2.6571e-02 8.4942e-01 weaklyHypermeth 3.4416e-01 1.00000000 insignificant 2.9777e-02 7.1440e-01 weaklyHypermeth 4.9406e-01 1.0000e+00 insignificant 0.0403160 3.0501e-01 lowCoverage 1.0000e+00 lowCoverage 0.587549 0.6847826 -0.0969974 5 0.636955 0.712023 -0.0750687 9.8573e-01 9.4687e-04 weaklyHypometh 1.0000000 1.5781e-01 insignificant 9.9872e-01 2.8739e-03 weaklyHypometh 1.0000000 0.4105553 insignificant -0.09209655 0.03984843 lowCoverage 1.00000 lowCoverage 0.648871 0.5492958 0.0965930 5 0.701453 0.604796 0.09665666 1.0906e-04 9.9999e-01 weaklyHypermeth 2.3815e-03 1.0000000 weaklyHypermeth 1.5208e-04 9.9999e-01 weaklyHypermeth 5.2440e-03 1.0000000 weaklyHypermeth 0.1113476 1.8171e-02 lowCoverage 4.8501e-01 lowCoverage 0.648871 0.6847826 -0.03699475 5 0.701453 0.712023 -0.0105705 6.2934e-01 0.22327841 insignificant 1.00000000 1.00000 insignificant 0.68139615 0.25047090 insignificant 1.000000 1.00000 insignificant -0.02106499 0.58853140 lowCoverage 1.00000 lowCoverage 0.5492958 0.6847826 -0.1352606 5 0.604796 0.712023 -0.1072272 0.99318781 1.0638e-03 weaklyHypometh 1.00000 3.0393e-02 weaklyHypometh 0.9989871 1.1569e-04 weaklyHypometh 1.00000 8.8990e-03 weaklyHypometh -0.1324126 1.7867e-02 lowCoverage 5.8877e-01 lowCoverage chr8 126313350 126314350 31602 NSMCE2 ENSG00000156831 0.909202 200 6 0.632660 63 4 0.5607493 56 4 0.8720085 183 6 0.9000000 22 2 0.863163 206 5 1.0000000 26 2 0.820521 78 6 0.7458333 19 1 0.9272727 43 4 0.925259 126 6 0.964286 15 1 0.9436508 70 6 NA 0 0 0.8592593 49 3 0.9375000 10 0 0.8035714 18 1 0.8306038 195 6 0.833333 28 3 0.903549 198 6 0.833333 15 1 0.884615 42 4 0.715368 99 4 0.791667 20 1 0.979167 34 4 0.8740741 96 6 0.7536550 31 2 0.5833333 18 2 0.8818182 22 1 0.9547669 98 5 0.8813372 90 6 0.860040 253 6 0.7721561 78 6 0.8000000 14 1 0.8293333 92 2 0.8750000 6 0 0.858586 52 4 0.8460979 77 6 0.939120 139 6 0.873737 74 4 0.931624 71 4 0.8944444 70 6 0.7862850 121 6 0.938318 0.828942 0.8478489 0.987904 0.9456522 0.913873 1.000000 0.9713543 0.8206522 0.9640316 0.904040 0.9068323 0.9834369 NA 0.9188406 0.9728261 0.7538820 0.9207800 1.0000000 0.973910 0.891304 0.7826087 0.938594 0.967391 0.983696 0.8550725 0.739003 0.855072 0.9398132 0.945260 0.9203840 0.888634 0.9293047 0.9931324 0.93798858 0.97820597 0.9802372 0.6105072 0.932155 0.990119 0.9498328 0.9492754 0.9115205 1 0.8928349 0.883863 0.0089706 6 0.861545 0.870817 -0.0092718 0.170688 8.1859e-02 insignificant 1 1.0000e+00 insignificant 0.416321 1.4467e-01 insignificant 1 1.0000000 insignificant 0.02157344 0.5974443 lowCoverage 1 lowCoverage 0.8928349 0.8746082 0.02814687 3 0.861545 0.843057 0.01848853 4.3445e-01 8.5916e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 8.9415e-01 4.3667e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0241425 4.2510e-01 lowCoverage 1.0000e+00 lowCoverage 0.892835 0.9368421 -0.0270472 6 0.861545 0.876487 -0.0149417 7.8521e-01 6.7271e-02 insignificant 1.0000000 1.0000e+00 insignificant 8.9451e-01 8.8237e-02 insignificant 1.0000000 1.0000000 insignificant -0.03070416 0.42680758 lowCoverage 1.00000 lowCoverage 0.883863 0.8746082 0.0047637 3 0.870817 0.843057 0.02776029 1.3194e-01 8.3730e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 4.1577e-01 2.7841e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 0.0025690 9.4259e-01 lowCoverage 1.0000e+00 lowCoverage 0.883863 0.9368421 -0.02825738 6 0.870817 0.876487 -0.0056699 7.9570e-01 0.12823511 insignificant 1.00000000 1.00000 insignificant 0.91415019 0.34274819 insignificant 1.000000 1.00000 insignificant -0.05227760 0.23186391 lowCoverage 1.00000 lowCoverage 0.8746082 0.9368421 -0.0374697 3 0.843057 0.876487 -0.0334302 0.95130923 1.0119e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.7239435 2.7604e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage -0.0548466 1.2958e-01 lowCoverage 1.0000e+00 lowCoverage chr8 126415050 126416050 31613 ENSG00000208579,ENSG00000222813 0.863982 356 13 0.844293 111 6 0.6443590 110 8 0.8771206 252 13 0.8589286 73 5 0.830412 240 12 0.8750000 67 3 0.888731 57 6 0.8888889 62 3 0.8682423 78 6 0.901682 240 11 0.686391 49 3 0.9087912 116 6 NA 0 0 0.9013986 101 11 0.7416334 53 4 0.8424242 33 2 0.9028402 391 13 0.782780 140 12 0.890828 229 11 0.893889 41 4 0.902457 88 8 0.798794 205 9 0.762238 60 6 0.902958 73 8 0.7750992 237 11 0.8399767 70 6 0.9722222 34 3 0.7986378 89 6 0.7673445 161 12 0.8615916 152 12 0.857751 298 12 0.8102564 80 6 0.8591272 126 12 0.8066132 254 12 0.7742063 51 7 0.908120 49 3 0.8157773 194 12 0.907493 306 13 0.919293 431 12 0.878042 388 13 0.9322995 235 12 0.8647544 328 12 0.901732 0.871910 0.8516980 0.949349 0.9448208 0.848165 0.945736 0.8765541 0.9531153 0.8905454 0.940043 0.8512224 0.9455888 NA 0.9491896 0.9020563 0.9594422 0.9248599 0.8811530 0.938014 0.857699 0.9406182 0.912732 0.980268 0.907083 0.8747278 0.868985 0.971576 0.8863447 0.879476 0.9261378 0.898541 0.8935401 0.8589969 0.87019956 0.87921742 0.9161299 0.8819868 0.935432 0.930368 0.9044526 0.9381620 0.9340568 2 0.8929996 0.861406 0.0249298 11 0.844602 0.835228 0.0093747 0.019334 9.5791e-01 weaklyHypermeth 1 1.0000e+00 insignificant 0.117676 3.7415e-01 insignificant 1 1.0000000 insignificant -0.00237511 0.9271758 insignificant 1 insignificant 0.8932849 0.8408488 0.05269236 11 0.871110 0.814698 0.05641198 3.1973e-06 9.9478e-01 weaklyHypermeth 7.7982e-05 1.00000000 weaklyHypermeth 1.5390e-02 7.4188e-01 weaklyHypermeth 2.9596e-01 1.0000e+00 insignificant 0.0130214 6.2383e-01 insignificant 1.0000e+00 insignificant 0.893000 0.9034360 -0.0150431 11 0.844602 0.902526 -0.0579237 9.6152e-01 3.8829e-01 insignificant 1.0000000 1.0000e+00 insignificant 8.4100e-01 6.3652e-01 insignificant 1.0000000 1.0000000 insignificant -0.05833825 0.01379816 weaklyHypometh 0.72622 insignificant 0.861794 0.8408488 0.0319742 11 0.848194 0.814698 0.03349567 2.2400e-03 8.0317e-01 weaklyHypermeth 3.7334e-02 1.0000000 weaklyHypermeth 4.1009e-02 5.6569e-01 weaklyHypermeth 6.4077e-01 1.0000000 insignificant 0.0153966 5.7935e-01 insignificant 1.0000e+00 insignificant 0.861406 0.9034360 -0.03663898 10 0.835228 0.902526 -0.0672984 9.9922e-01 0.04709027 weaklyHypometh 1.00000000 1.00000 insignificant 0.69166973 0.24447462 insignificant 1.000000 1.00000 insignificant -0.05596314 0.02711841 weaklyHypometh 1.00000 insignificant 0.8408488 0.9033788 -0.0707436 10 0.814698 0.895028 -0.0803298 0.99744010 1.9575e-04 weaklyHypometh 1.00000 6.7499e-03 weaklyHypometh 0.9481851 4.8638e-02 weaklyHypometh 1.00000 9.1769e-01 insignificant -0.0713597 1.4227e-02 weaklyHypometh 5.2693e-01 insignificant chr8 126533450 126534450 31623 TRIB1 ENSG00000173334 0.929437 341 5 0.958158 189 5 0.8909091 55 5 0.9335626 285 5 0.8933333 39 5 0.947746 390 5 0.9166667 74 5 0.928589 114 5 0.9666667 26 5 0.9375000 58 3 0.933694 181 5 1.000000 3 0 1.0000000 54 5 0.87500000 38 5 0.9536797 89 5 1.0000000 13 1 NA 0 0 0.8365775 522 5 0.899714 142 5 0.938248 261 5 0.961667 60 5 0.971429 27 3 0.911765 146 5 0.950000 35 3 0.915391 87 5 0.9426763 178 5 0.9455952 50 3 0.8928571 30 4 0.9252965 161 5 0.9640773 258 5 0.9356971 205 5 0.965567 293 5 0.8069862 152 5 0.8259887 171 5 1.0000000 72 4 1.0000000 22 2 0.567305 94 5 0.8768219 220 5 0.915644 201 5 0.878155 222 5 0.926483 277 5 0.9209095 176 5 0.8758573 256 5 0.928280 0.954303 0.8845209 0.936574 0.9009009 0.944681 0.906156 0.9269529 0.9624625 0.9408784 0.935159 0.9813829 1.0000000 0.859234 0.9478374 0.9813829 NA 0.8302273 0.9085894 0.936461 0.956832 0.9678250 0.912842 0.963964 0.915844 0.9424515 0.938733 0.899614 0.9184082 0.966057 0.9323917 0.965707 0.7871466 0.8131502 1.00000000 1.00000000 0.5516340 0.8663101 0.913221 0.849923 0.9284580 0.9213784 0.8731574 0 0.9217119 0.943137 -0.0215891 5 0.921295 0.942992 -0.0216970 0.997657 3.2308e-02 weaklyHypometh 1 1.0000e+00 insignificant 0.718422 5.8031e-01 insignificant 1 1.0000000 insignificant -0.00651119 0.5967706 lowCoverage 1 lowCoverage 0.9217119 0.8317373 0.09093832 5 0.921295 0.820600 0.10069488 4.5347e-07 9.2422e-01 weaklyHypermeth 1.2596e-05 1.00000000 weaklyHypermeth 2.0416e-01 8.0587e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0874734 2.4034e-01 lowCoverage 1.0000e+00 lowCoverage 0.921712 0.8956676 0.0238761 5 0.921295 0.896507 0.0247880 2.7997e-02 8.1995e-01 weaklyHypermeth 1.0000000 1.0000e+00 insignificant 1.9195e-02 9.9463e-01 weaklyHypermeth 0.8724995 1.0000000 insignificant 0.03024708 0.06336085 lowCoverage 1.00000 lowCoverage 0.943137 0.8317373 0.1153104 5 0.942992 0.820600 0.12239193 8.1840e-07 9.9213e-01 weaklyHypermeth 2.4071e-05 1.0000000 weaklyHypermeth 1.4820e-01 7.7379e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0939846 2.1066e-01 lowCoverage 1.0000e+00 lowCoverage 0.943137 0.8956676 0.04716511 5 0.942992 0.896507 0.0464850 2.9957e-06 0.99192256 weaklyHypermeth 0.00033286 1.00000 weaklyHypermeth 0.00099778 0.99335532 weaklyHypermeth 0.090708 1.00000 weaklyHypermeth 0.03675827 0.02362744 lowCoverage 1.00000 lowCoverage 0.8317373 0.8956676 -0.0638377 5 0.820600 0.896507 -0.0759069 0.85153966 2.6425e-02 weaklyHypometh 1.00000 4.4042e-01 insignificant 0.0690302 8.6631e-01 insignificant 1.00000 1.0000e+00 insignificant -0.0572263 4.2501e-01 lowCoverage 1.0000e+00 lowCoverage chr8 128647850 128648850 31671 POU5F1B ENSG00000212993 0.699645 119 6 0.528139 76 5 0.4240741 85 5 0.6828028 146 6 0.7055556 43 5 0.621539 212 6 0.5783730 35 5 0.511913 107 5 0.5802198 39 4 0.6066667 24 3 0.573248 163 5 0.850000 14 0 0.7458897 64 5 0.61904762 23 2 0.7205387 44 5 0.7500000 11 0 0.2500000 7 0 0.6539562 137 6 0.730649 96 5 0.584921 120 6 0.527778 18 1 0.629630 26 2 0.696465 71 6 0.460317 40 4 1.000000 16 2 0.7296296 122 6 0.6112132 37 2 0.5714286 15 2 0.6875000 67 5 0.6776447 139 6 0.6361238 135 6 0.598031 220 7 0.4252632 80 5 0.7760166 58 5 0.6111111 103 5 0.7000000 7 0 0.785913 87 5 0.6994012 139 6 0.443398 100 6 0.785773 124 6 0.739583 123 6 0.7537037 52 6 0.7330910 158 6 0.785612 0.625631 0.5601852 0.767121 0.7795139 0.708224 0.766452 0.6336555 0.7606838 0.6939815 0.707011 0.8402778 0.7854027 0.654762 0.6806958 0.7708333 0.5069444 0.7696609 0.7201156 0.750231 0.820125 0.6951253 0.738805 0.671296 1.000000 0.8456790 0.641714 0.794626 0.6701389 0.750675 0.7432059 0.694866 0.5421418 0.6824117 0.74834656 0.86111111 0.7712632 0.7257656 0.795612 0.787504 0.7804784 0.8285714 0.7446641 1 0.6664537 0.686534 -0.0181854 6 0.566522 0.620695 -0.0541727 0.946833 4.1416e-01 insignificant 1 1.0000e+00 insignificant 0.996071 3.9611e-01 insignificant 1 1.0000000 insignificant -0.03128790 0.5244396 lowCoverage 1 lowCoverage 0.6668798 0.6856540 -0.00233501 5 0.637338 0.711930 -0.07459202 8.3013e-01 1.3068e-01 insignificant 1.0000e+00 1.00000000 insignificant 9.4474e-01 4.3454e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0454253 4.8503e-01 lowCoverage 1.0000e+00 lowCoverage 0.666454 0.6481149 -0.0605515 6 0.566522 0.626507 -0.0599847 9.7564e-01 1.4397e-02 weaklyHypometh 1.0000000 8.9983e-01 insignificant 9.9870e-01 4.8899e-02 weaklyHypometh 1.0000000 1.0000000 insignificant -0.07025090 0.34956980 lowCoverage 1.00000 lowCoverage 0.687708 0.6856540 0.0179295 5 0.656615 0.711930 -0.05531436 4.2126e-01 4.4484e-01 insignificant 1.0000e+00 1.0000000 insignificant 5.6501e-01 8.0243e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0141374 8.3673e-01 lowCoverage 1.0000e+00 lowCoverage 0.686534 0.6481149 -0.03972801 6 0.620695 0.626507 -0.0058119 9.4003e-01 0.04566599 weaklyHypometh 1.00000000 1.00000 insignificant 0.95038354 0.36321322 insignificant 1.000000 1.00000 insignificant -0.03896300 0.61172551 lowCoverage 1.00000 lowCoverage 0.6856540 0.6492806 -0.0633966 5 0.711930 0.704820 0.0071093 0.86207866 4.4546e-03 weaklyHypometh 1.00000 9.6840e-02 weaklyHypometh 0.9493315 1.2316e-01 insignificant 1.00000 1.0000e+00 insignificant -0.0248256 7.7237e-01 lowCoverage 1.0000e+00 lowCoverage chr8 128648050 128649050 31672 POU5F1B ENSG00000212993 0.699645 119 6 0.528139 76 5 0.4240741 85 5 0.6828028 146 6 0.7055556 43 5 0.567474 211 6 0.5783730 35 5 0.511913 107 5 0.5802198 39 4 0.6066667 24 3 0.573248 163 5 0.850000 14 0 0.7458897 64 5 0.61904762 23 2 0.7205387 44 5 0.7500000 11 0 0.2500000 7 0 0.6539562 137 6 0.730649 96 5 0.584921 120 6 0.527778 18 1 0.629630 26 2 0.696465 71 6 0.460317 40 4 1.000000 16 2 0.7296296 122 6 0.6112132 37 2 0.5714286 15 2 0.6875000 67 5 0.6239188 138 6 0.6361238 135 6 0.598031 220 7 0.4252632 80 5 0.7760166 58 5 0.6111111 103 5 0.7000000 7 0 0.785913 87 5 0.6564585 138 6 0.498822 99 6 0.785773 124 6 0.696181 122 6 0.7537037 52 6 0.6949611 156 6 0.785612 0.625631 0.5601852 0.767121 0.7795139 0.708224 0.766452 0.6336555 0.7606838 0.6939815 0.707011 0.8402778 0.7854027 0.654762 0.6806958 0.7708333 0.5069444 0.7696609 0.7201156 0.750231 0.820125 0.6951253 0.738805 0.671296 1.000000 0.8456790 0.641714 0.794626 0.6701389 0.750675 0.7432059 0.694866 0.5421418 0.6824117 0.74834656 0.86111111 0.7712632 0.7257656 0.795612 0.787504 0.7804784 0.8285714 0.7446641 1 0.6662404 0.686188 -0.0181975 6 0.512338 0.573282 -0.0609443 0.891105 2.8765e-01 insignificant 1 1.0000e+00 insignificant 0.987761 2.7228e-01 insignificant 1 1.0000000 insignificant -0.02951403 0.5485448 lowCoverage 1 lowCoverage 0.6666667 0.6849894 -0.00233663 5 0.585529 0.670777 -0.08524802 7.1273e-01 7.0721e-02 insignificant 1.0000e+00 1.00000000 insignificant 8.8217e-01 2.9739e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0409715 5.2557e-01 lowCoverage 1.0000e+00 lowCoverage 0.666240 0.6473779 -0.0607619 6 0.512338 0.611070 -0.0987327 9.8632e-01 8.2682e-03 weaklyHypometh 1.0000000 8.2233e-01 insignificant 9.9932e-01 2.6093e-02 weaklyHypometh 1.0000000 1.0000000 insignificant -0.06773261 0.28032300 lowCoverage 1.00000 lowCoverage 0.687361 0.6849894 0.0179503 5 0.607560 0.670777 -0.06321642 2.8603e-01 3.0629e-01 insignificant 1.0000e+00 1.0000000 insignificant 4.1654e-01 6.7710e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0114574 8.6663e-01 lowCoverage 1.0000e+00 lowCoverage 0.686188 0.6473779 -0.04007032 6 0.573282 0.611070 -0.0377884 9.5716e-01 0.02885759 weaklyHypometh 1.00000000 1.00000 insignificant 0.94916960 0.25798904 insignificant 1.000000 1.00000 insignificant -0.03821857 0.55885622 lowCoverage 1.00000 lowCoverage 0.6849894 0.6485507 -0.0641686 5 0.670777 0.698366 -0.0275894 0.88668258 2.2505e-03 weaklyHypometh 1.00000 5.6463e-02 weaklyHypometh 0.9490993 7.0876e-02 insignificant 1.00000 1.0000e+00 insignificant -0.0267611 7.2499e-01 lowCoverage 1.0000e+00 lowCoverage chr8 128913650 128914650 31684 MIR1204 ENSG00000221315 0.881857 168 6 0.839247 99 6 0.8062020 98 6 0.7962048 116 5 0.9402056 57 6 0.942041 174 6 0.7910256 80 6 0.738892 93 5 0.6653439 53 4 0.8548942 72 6 0.800581 160 6 0.661859 44 4 0.8050366 72 5 0.92857143 28 3 0.8079297 79 6 0.8038194 41 3 0.8427350 52 4 0.8003663 122 6 0.895103 107 6 0.847071 156 6 0.853175 22 2 0.939951 47 5 0.843872 106 6 0.744444 43 5 0.879630 43 3 0.7375122 107 6 0.7734217 60 4 0.8459596 26 2 0.7205467 81 6 0.8311834 103 6 0.8097826 102 6 0.545855 217 6 0.6845085 75 6 0.6384696 85 6 0.7519450 115 6 0.8096866 41 4 0.675397 46 4 0.7482943 110 6 0.898091 148 6 0.913914 162 6 0.912520 120 6 0.8562468 154 6 0.9184494 179 6 0.917518 0.815983 0.8039172 0.848362 0.9495834 0.968990 0.853895 0.7707779 0.6840371 0.8816487 0.840838 0.7372400 0.8321561 0.867663 0.8553728 0.8880154 0.8810676 0.8157855 0.8800988 0.878358 0.841473 0.8818905 0.870339 0.821803 0.914920 0.8063624 0.818577 0.883171 0.7809224 0.830978 0.8608163 0.854697 0.7285518 0.7542358 0.78185954 0.81287427 0.8461216 0.7722011 0.906092 0.917550 0.9371251 0.8784665 0.9455992 2 0.8540887 0.829676 0.0304810 6 0.845681 0.683482 0.1621993 0.007313 9.9363e-01 weaklyHypermeth 1 1.0000e+00 insignificant 0.158954 9.5704e-01 insignificant 1 1.0000000 insignificant 0.02867157 0.4070908 lowCoverage 1 lowCoverage 0.8536977 0.7669492 0.09675612 6 0.801590 0.627846 0.17374411 3.3785e-08 9.9896e-01 weaklyHypermeth 1.0558e-06 1.00000000 weaklyHypermeth 7.8129e-04 9.9766e-01 weaklyHypermeth 2.0560e-02 1.0000e+00 weaklyHypermeth 0.1043992 7.0145e-03 weaklyHypermeth 2.1920e-01 insignificant 0.854770 0.8938401 -0.0506855 6 0.876391 0.917942 -0.0415503 9.9999e-01 4.1901e-02 weaklyHypometh 1.0000000 1.0000e+00 insignificant 9.9999e-01 2.2435e-02 weaklyHypometh 1.0000000 1.0000000 insignificant -0.07739487 0.00120512 weaklyHypometh 0.20085 insignificant 0.831933 0.7669492 0.0695341 6 0.759715 0.627846 0.13186880 1.1659e-03 9.9798e-01 weaklyHypermeth 2.2860e-02 1.0000000 weaklyHypermeth 1.9066e-02 9.9851e-01 weaklyHypermeth 3.4665e-01 1.0000000 insignificant 0.0757276 7.0070e-02 lowCoverage 1.0000e+00 lowCoverage 0.830366 0.8938401 -0.08121256 6 0.706417 0.917942 -0.2115245 9.9998e-01 0.00013194 weaklyHypometh 1.00000000 0.13194 insignificant 0.99999265 0.00389627 weaklyHypometh 1.000000 0.97407 insignificant -0.10606643 0.00450007 lowCoverage 0.61808 lowCoverage 0.7685775 0.8935611 -0.1447372 6 0.732487 0.890589 -0.1581018 0.99999865 1.1460e-06 weaklyHypometh 1.00000 6.7413e-05 weaklyHypometh 0.9999935 5.7996e-05 weaklyHypometh 1.00000 4.8330e-03 weaklyHypometh -0.1817941 3.7639e-04 weaklyHypometh 4.1821e-02 weaklyHypometh chr8 128935150 128936150 31688 MIR1204 ENSG00000221315 0.629381 322 10 0.572590 254 10 0.5180459 286 10 0.7700277 294 7 0.5726163 116 9 0.803955 383 10 0.5064771 214 10 0.610974 258 10 0.5697309 269 10 0.7034158 262 10 0.658893 347 10 0.502151 146 8 0.5481567 329 10 0.79054279 130 7 0.6139533 280 10 0.3544931 95 4 0.2037005 75 6 0.4081283 410 9 0.413964 349 10 0.743554 334 10 0.545289 110 10 0.705960 166 5 0.744068 254 10 0.637352 104 10 0.808039 94 5 0.7481056 302 10 0.5671934 385 10 0.6316338 149 7 0.7272799 299 9 0.7981335 334 10 0.6933884 320 10 0.756903 372 10 0.1034377 350 10 0.0272222 298 8 0.0000000 280 9 0.0000000 50 5 0.083003 219 9 0.0406599 470 10 0.846018 325 9 0.753196 303 10 0.878103 238 5 0.8064025 226 7 0.5208426 252 5 0.666716 0.613770 0.5576382 0.697377 0.7293669 0.790795 0.507238 0.6993714 0.5984892 0.7835995 0.673372 0.5668430 0.5972387 0.758927 0.6655062 0.5842183 0.3374199 0.4269383 0.4346222 0.768136 0.551633 0.6667218 0.813447 0.708512 0.767524 0.7289308 0.626029 0.587325 0.7649392 0.806818 0.7685109 0.765414 0.0884748 0.0161309 0.00045323 0.00045323 0.0581750 0.0403552 0.860456 0.771065 0.8006771 0.8443842 0.6528315 5 0.6161459 0.742293 -0.1241206 10 0.569314 0.664697 -0.0953827 0.999985 2.4076e-10 weaklyHypometh 1 2.4076e-07 weaklyHypometh 0.999953 2.4880e-06 weaklyHypometh 1 0.0024880 weaklyHypometh -0.12220804 0.0070609 weaklyHypometh 1 insignificant 0.6161459 0.0395921 0.57799600 10 0.569314 0.051367 0.51794733 5.5987e-54 1.0000e+00 hypermethylated 1.3997e-51 1.00000000 hypermethylated 5.7231e-21 1.0000e+00 hypermethylated 1.9077e-18 1.0000e+00 hypermethylated 0.5323503 6.5753e-13 hypermethylated 1.0959e-10 hypermethylated 0.616311 0.8019360 -0.1579725 8 0.590767 0.743516 -0.1527494 9.9997e-01 1.0109e-08 weaklyHypometh 1.0000000 1.0109e-05 weaklyHypometh 9.9999e-01 2.6956e-06 weaklyHypometh 1.0000000 0.0026956 weaklyHypometh -0.18617488 0.03870680 weaklyHypometh 1.00000 insignificant 0.742293 0.0395921 0.7057460 10 0.664697 0.051367 0.61333003 2.5307e-71 1.0000e+00 hypermethylated 8.4356e-69 1.0000000 hypermethylated 2.9353e-20 1.0000e+00 hypermethylated 9.7845e-18 1.0000000 hypermethylated 0.6545584 2.8790e-13 hypermethylated 9.5968e-11 hypermethylated 0.742036 0.8020833 -0.04233079 8 0.664697 0.764890 -0.1001931 7.6962e-01 0.01090254 weaklyHypometh 1.00000000 1.00000 insignificant 0.96615857 0.00774155 weaklyHypometh 1.000000 1.00000 insignificant -0.06396684 0.38894157 insignificant 1.00000 insignificant 0.0396158 0.8019360 -0.7613330 8 0.056036 0.743516 -0.6874798 1.00000000 2.0694e-45 hypomethylated 1.00000 6.8980e-43 hypomethylated 1.0000000 5.3169e-13 hypomethylated 1.00000 1.7723e-10 hypomethylated -0.7185252 1.8256e-04 hypomethylated 2.2820e-02 hypomethylated chr8 128941550 128942550 31689 MIR1204 ENSG00000221315 0.882071 173 7 0.681668 216 7 0.6618669 112 7 0.9060374 104 7 0.9275362 40 3 0.824241 233 7 0.9339478 49 3 0.716616 125 7 0.7121581 103 7 0.8152932 95 5 0.769257 288 7 0.752083 27 3 0.8123257 176 7 0.85656566 63 3 0.8720380 102 7 0.6492063 28 3 0.6285714 18 2 0.8964959 169 6 0.790239 239 7 0.870981 194 7 0.937995 148 7 0.869886 108 7 0.773203 135 7 0.828086 50 6 0.790152 68 5 0.9159806 201 7 0.8859567 148 7 0.7407407 37 3 0.7360059 177 7 0.9670875 205 7 0.7606035 181 7 0.866085 289 7 0.9617347 105 7 0.9020238 111 7 0.8000000 108 5 0.9722222 43 3 0.678342 85 5 0.9741687 213 7 0.940476 92 7 0.902501 182 7 0.646902 67 5 0.8039216 85 5 0.8223734 121 7 0.854427 0.755275 0.6255329 0.925107 0.8556981 0.854384 0.909105 0.7684906 0.8289774 0.8085880 0.850231 0.7887290 0.8136978 0.861655 0.8644525 0.7388971 0.5356741 0.9047573 0.8891207 0.849883 0.871431 0.8387790 0.851002 0.901978 0.900772 0.8965284 0.895707 0.729816 0.8961615 0.918018 0.8620776 0.851495 0.9339671 0.9208813 0.87625899 0.94483553 0.8510198 0.9801374 0.938050 0.918333 0.8076433 0.9098603 0.8461612 2 0.8433829 0.891242 -0.0438560 7 0.764442 0.833107 -0.0686655 0.999934 4.4189e-03 weaklyHypometh 1 5.5236e-01 insignificant 0.999074 3.0134e-02 weaklyHypometh 1 1.0000000 insignificant -0.04135519 0.2010723 insignificant 1 insignificant 0.8433216 0.9338346 -0.08709778 7 0.738269 0.726948 0.01132053 9.8000e-01 6.5044e-05 weaklyHypometh 1.0000e+00 0.01084073 weaklyHypometh 9.9599e-01 1.2953e-04 weaklyHypometh 1.0000e+00 6.4764e-02 weaklyHypometh -0.0834554 1.6187e-01 insignificant 1.0000e+00 insignificant 0.843591 0.8756856 -0.0407463 7 0.768052 0.767044 0.0010084 7.7229e-01 2.2504e-02 weaklyHypometh 1.0000000 1.0000e+00 insignificant 9.6264e-01 2.8948e-02 weaklyHypometh 1.0000000 1.0000000 insignificant -0.02527486 0.66433218 insignificant 1.00000 insignificant 0.891055 0.9338346 -0.0454625 7 0.814564 0.726948 0.08761549 7.2787e-01 3.1115e-04 weaklyHypometh 1.0000e+00 0.0777866 weaklyHypometh 7.4948e-01 2.3533e-03 weaklyHypometh 1.0000e+00 1.0000000 insignificant -0.0421002 4.5984e-01 insignificant 1.0000e+00 insignificant 0.891442 0.8756856 0.00019245 7 0.833051 0.767044 0.0660069 9.0041e-02 0.21600522 insignificant 1.00000000 1.00000 insignificant 0.55735774 0.35612293 insignificant 1.000000 1.00000 insignificant 0.01608033 0.78290627 insignificant 1.00000 insignificant 0.9352410 0.8756856 0.0490883 7 0.817817 0.767044 0.0507728 0.00070017 9.8596e-01 weaklyHypermeth 0.17504 1.0000e+00 insignificant 0.0114512 7.9448e-01 weaklyHypermeth 1.00000 1.0000e+00 insignificant 0.0581805 4.3062e-01 insignificant 1.0000e+00 insignificant chr8 128945450 128946450 31691 MIR1204 ENSG00000221315 0.862881 167 5 0.805556 18 2 0.7408858 67 5 0.6701754 79 5 0.7433333 24 3 0.765071 147 5 0.8156863 86 5 0.860684 41 2 0.7689542 55 5 0.8470814 72 5 0.863910 103 5 0.871429 46 5 0.8533333 51 4 NA 0 0 0.8500000 54 5 0.7388889 55 5 0.8606061 38 4 0.7234932 81 5 0.920798 69 4 0.875311 115 5 0.642857 20 2 0.811104 43 5 0.634571 89 5 0.960000 19 2 0.916667 28 3 0.7148160 94 6 0.9027778 31 3 0.9100000 22 2 0.6745658 48 4 0.6741190 107 6 0.6807359 106 6 0.738841 168 5 0.8925926 22 2 0.6413776 69 5 0.6814286 52 3 0.7555556 53 5 0.957778 24 2 0.6401810 110 5 0.727160 176 5 0.758864 202 5 0.735847 148 5 0.8606406 180 5 0.7065067 155 5 0.826438 0.794904 0.7515585 0.813709 0.7403101 0.852647 0.821119 0.8767641 0.7558900 0.8657924 0.880516 0.9003322 0.8922481 NA 0.8255814 0.7503230 0.8669838 0.8672546 0.9079043 0.855013 0.700997 0.7845817 0.761209 0.953488 0.928295 0.8588694 0.878213 0.924419 0.6980001 0.756211 0.8254304 0.880382 0.7612057 0.6501806 0.64617940 0.71576227 0.9509044 0.7626556 0.864559 0.915321 0.8918420 0.8605244 0.8487034 0 0.8362573 0.814194 0.0060999 5 0.749176 0.699049 0.0501270 0.235803 8.9932e-01 insignificant 1 1.0000e+00 insignificant 0.365681 8.3692e-01 insignificant 1 1.0000000 insignificant 0.04077587 0.3021952 lowCoverage 1 lowCoverage 0.8362573 0.7515152 0.08354218 5 0.749176 0.637162 0.11201405 1.0825e-03 9.7442e-01 weaklyHypermeth 1.9330e-02 1.00000000 weaklyHypermeth 2.8181e-02 8.7721e-01 weaklyHypermeth 4.8589e-01 1.0000e+00 insignificant 0.0510449 4.0825e-01 lowCoverage 1.0000e+00 lowCoverage 0.836257 0.8687573 -0.0408742 5 0.749176 0.729625 0.0195516 7.7347e-01 1.7051e-01 insignificant 1.0000000 1.0000e+00 insignificant 6.4975e-01 3.5980e-01 insignificant 1.0000000 1.0000000 insignificant 0.05472684 0.12295230 lowCoverage 1.00000 lowCoverage 0.814194 0.7515152 0.0769375 5 0.699049 0.637162 0.06188704 8.6117e-03 9.6308e-01 weaklyHypermeth 1.2853e-01 1.0000000 insignificant 1.0325e-01 8.7102e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0102690 8.7847e-01 lowCoverage 1.0000e+00 lowCoverage 0.814194 0.8687573 -0.04888768 5 0.699049 0.729625 -0.0305754 9.1904e-01 0.12657559 insignificant 1.00000000 1.00000 insignificant 0.88909205 0.46575179 insignificant 1.000000 1.00000 insignificant 0.01395096 0.75686609 lowCoverage 1.00000 lowCoverage 0.7515152 0.8687573 -0.1246977 5 0.637162 0.729625 -0.0924624 0.99933721 1.7830e-03 weaklyHypometh 1.00000 4.6921e-02 weaklyHypometh 0.9523272 5.9405e-02 insignificant 1.00000 1.0000e+00 insignificant 0.0036820 9.5385e-01 lowCoverage 1.0000e+00 lowCoverage chr8 128947150 128948150 31692 MIR1204 ENSG00000221315 0.845004 229 5 0.692943 255 5 0.7702054 117 5 0.8904555 276 5 0.7307018 88 5 0.854453 407 5 0.7493109 126 5 0.821779 139 5 0.6616180 128 5 0.8899642 92 5 0.840085 264 5 0.605594 43 3 0.8280117 196 5 0.82694872 99 5 0.8648990 155 5 0.7454545 67 3 0.5000000 6 0 0.8142466 203 5 0.818194 202 5 0.781401 249 5 0.811655 70 5 0.764474 47 3 0.847411 119 5 0.843791 89 5 0.965152 30 2 0.8743830 328 5 0.7106658 106 5 0.7216667 74 5 0.8120563 178 5 0.8457714 314 5 0.8358290 295 5 0.817476 277 5 0.8279819 215 5 0.8190476 153 5 0.9841270 106 3 1.0000000 9 0 0.933590 103 5 0.9552745 279 5 0.880329 283 5 0.920519 274 5 0.812801 184 5 0.8560675 257 5 0.8647735 209 5 0.823298 0.669860 0.7704350 0.878948 0.7372512 0.864292 0.714232 0.8405427 0.6747334 0.8800676 0.840290 0.6440813 0.7876738 0.856135 0.8377035 0.8393782 0.5852355 0.7971131 0.7685776 0.782033 0.760994 0.8020862 0.851448 0.861314 0.952033 0.8568967 0.715126 0.658765 0.8217975 0.814369 0.8144315 0.821885 0.7862526 0.7421663 0.98642981 0.99493452 0.9154776 0.9565479 0.847043 0.897773 0.7940270 0.8385332 0.8549417 3 0.7916791 0.804359 -0.0168091 5 0.808871 0.830219 -0.0213473 0.885540 1.0536e-01 insignificant 1 1.0000e+00 insignificant 0.897708 1.8702e-01 insignificant 1 1.0000000 insignificant -0.04429746 0.1467921 lowCoverage 1 lowCoverage 0.7916791 0.8381503 -0.05761343 5 0.808871 0.896028 -0.08715685 9.8806e-01 1.4513e-06 weaklyHypometh 1.0000e+00 0.00048377 weaklyHypometh 1.0000e+00 8.4875e-08 weaklyHypometh 1.0000e+00 8.4875e-05 weaklyHypometh -0.1434401 3.9521e-03 lowCoverage 1.4115e-01 lowCoverage 0.791679 0.8666114 -0.0512550 5 0.808871 0.872638 -0.0637663 9.8801e-01 4.6609e-04 weaklyHypometh 1.0000000 1.1652e-01 insignificant 9.7232e-01 1.4718e-03 weaklyHypometh 1.0000000 0.3051195 insignificant -0.09033472 0.00514025 lowCoverage 0.46730 lowCoverage 0.804359 0.8381503 -0.0483208 5 0.830219 0.896028 -0.06580957 9.9493e-01 8.5373e-06 weaklyHypometh 1.0000e+00 0.0042686 weaklyHypometh 9.9998e-01 9.9959e-06 weaklyHypometh 1.0000e+00 0.0099959 weaklyHypometh -0.0991426 2.6953e-02 lowCoverage 5.8593e-01 lowCoverage 0.804359 0.8666114 -0.03588833 5 0.830219 0.872638 -0.0424190 9.8514e-01 0.00429519 weaklyHypometh 1.00000000 0.81935 insignificant 0.92422208 0.01253627 weaklyHypometh 1.000000 1.00000 insignificant -0.04603726 0.10374443 lowCoverage 1.00000 lowCoverage 0.8381503 0.8666114 0.0148587 5 0.896028 0.872638 0.0233905 0.02423295 9.4526e-01 weaklyHypermeth 1.00000 1.0000e+00 insignificant 0.0010134 9.9998e-01 weaklyHypermeth 0.50669 1.0000e+00 insignificant 0.0531053 1.8472e-01 lowCoverage 1.0000e+00 lowCoverage chr8 128988150 128989150 31704 MIR1204 ENSG00000221315 0.752705 408 7 0.599749 309 7 0.6725217 223 7 0.7856938 305 7 0.6056775 137 7 0.735070 624 7 0.6443183 259 7 0.704000 262 7 0.7019077 270 7 0.6652863 199 7 0.651369 312 7 0.769841 107 6 0.6490197 289 7 0.53119814 69 4 0.5824238 273 7 0.5328274 119 6 0.4755206 96 6 0.6465039 320 7 0.590795 249 7 0.807547 433 7 0.642284 131 7 0.587630 148 7 0.708341 331 7 0.728900 135 5 0.762711 118 7 0.6645645 371 7 0.4952387 189 7 0.6108280 131 6 0.6502762 269 7 0.7680262 393 7 0.8201186 367 7 0.823945 595 7 0.5328897 269 7 0.4460385 171 7 0.7025730 189 6 0.5548223 97 6 0.448280 214 7 0.6273938 396 7 0.720266 348 7 0.654591 352 7 0.685229 263 7 0.5777293 394 7 0.5861492 643 7 0.724393 0.694115 0.5943290 0.735234 0.6221048 0.745091 0.647779 0.7232835 0.6740628 0.7022031 0.724724 0.7114998 0.5797350 0.642363 0.6851636 0.6683701 0.5692969 0.6108472 0.6792377 0.821879 0.669197 0.6453774 0.723912 0.694848 0.784349 0.6999074 0.624828 0.612204 0.6454806 0.689571 0.7230701 0.757999 0.5057950 0.3762373 0.60278705 0.50317818 0.5472744 0.4934913 0.735888 0.639320 0.6956032 0.5983331 0.5505586 6 0.6910507 0.713881 -0.0184244 7 0.662363 0.681873 -0.0195098 0.896587 8.4834e-02 insignificant 1 1.0000e+00 insignificant 0.934128 9.6493e-02 insignificant 1 1.0000000 insignificant -0.03337313 0.3485616 insignificant 1 insignificant 0.6909920 0.5149701 0.18861220 7 0.628600 0.596783 0.03181629 7.6103e-08 7.6182e-01 weaklyHypermeth 2.3062e-06 1.00000000 weaklyHypermeth 3.3389e-03 8.0987e-01 weaklyHypermeth 8.1436e-02 1.0000e+00 weaklyHypermeth 0.1031991 5.5957e-02 insignificant 9.8170e-01 insignificant 0.691795 0.6035000 0.0688223 7 0.673753 0.605218 0.0685343 3.6968e-02 3.2315e-01 weaklyHypermeth 1.0000000 1.0000e+00 insignificant 2.6431e-01 6.4428e-02 insignificant 1.0000000 1.0000000 insignificant 0.01040562 0.76792374 insignificant 1.00000 insignificant 0.714151 0.5149701 0.2054602 7 0.700060 0.596783 0.10327712 2.7565e-09 8.5742e-01 hypermethylated 1.0209e-07 1.0000000 hypermethylated 3.1125e-03 9.4545e-01 weaklyHypermeth 7.4108e-02 1.0000000 weaklyHypermeth 0.1365723 2.1347e-02 weaklyHypermeth 5.2065e-01 insignificant 0.714331 0.6035000 0.07827017 7 0.711178 0.605218 0.1059599 9.9438e-03 0.64522775 weaklyHypermeth 0.38245427 1.00000 insignificant 0.26993156 0.58072128 insignificant 1.000000 1.00000 insignificant 0.04377874 0.29237267 insignificant 1.00000 insignificant 0.5153788 0.6035000 -0.1333240 7 0.626056 0.605218 0.0208372 0.98926967 1.0312e-03 weaklyHypometh 1.00000 3.0330e-02 weaklyHypometh 0.9998826 1.3485e-02 weaklyHypometh 1.00000 3.3712e-01 insignificant -0.0927935 9.6409e-02 insignificant 1.0000e+00 insignificant chr8 129016150 129017150 31712 MIR1204 ENSG00000221315 0.732072 250 5 0.728681 145 5 0.6874286 111 5 0.7707021 116 5 0.8000000 13 0 0.758238 193 5 0.6573427 60 5 0.694886 113 5 0.7218137 84 5 0.7756536 85 5 0.781931 167 5 0.630000 34 3 0.8446789 162 5 NA 0 0 0.8459670 118 5 0.7800000 26 2 0.6444444 36 5 0.7651957 195 5 0.850000 78 5 0.766732 232 5 0.676667 41 3 0.775038 85 5 0.694980 95 5 0.844444 34 5 0.839414 71 5 0.8427499 192 5 0.7140476 75 5 0.7580952 27 4 0.7779481 133 5 0.8209121 214 5 0.8076190 151 5 0.782424 253 5 0.7779733 123 5 0.7954545 92 5 0.8836364 81 5 0.7638889 44 5 0.697778 33 4 0.8337298 211 5 0.765725 227 5 0.791378 267 5 0.797367 242 5 0.8259595 213 5 0.8234409 217 5 0.779175 0.789596 0.7024161 0.826930 0.8590604 0.823188 0.746140 0.7111615 0.7534297 0.8156501 0.832235 0.7070470 0.8845798 NA 0.8732511 0.8288591 0.6808352 0.8163066 0.8942953 0.807316 0.761409 0.7902003 0.763419 0.872483 0.877887 0.8821830 0.760906 0.783509 0.8151834 0.842753 0.8350272 0.817436 0.8435382 0.8558572 0.91799878 0.83361298 0.7557047 0.8738812 0.819147 0.837348 0.8276814 0.8653329 0.8659089 2 0.7750225 0.792123 -0.0331403 5 0.761892 0.795015 -0.0331227 0.914784 2.8084e-02 weaklyHypometh 1 1.0000e+00 insignificant 0.796071 1.4688e-01 insignificant 1 1.0000000 insignificant -0.02861066 0.2136700 lowCoverage 1 lowCoverage 0.7750225 0.7825342 -0.04331549 5 0.761892 0.808189 -0.04629706 9.8800e-01 8.1873e-03 weaklyHypometh 1.0000e+00 0.62979199 insignificant 8.9509e-01 2.2592e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0428259 1.8669e-01 lowCoverage 1.0000e+00 lowCoverage 0.775023 0.8353345 -0.0388181 5 0.761892 0.800880 -0.0389879 9.6963e-01 4.1643e-02 weaklyHypometh 1.0000000 1.0000e+00 insignificant 9.3569e-01 1.9147e-02 weaklyHypometh 1.0000000 1.0000000 insignificant -0.05152321 0.01277686 lowCoverage 0.70983 lowCoverage 0.792123 0.7825342 -0.0026486 5 0.795015 0.808189 -0.01317438 4.3255e-01 4.6345e-03 weaklyHypometh 1.0000e+00 0.5793073 insignificant 2.6293e-01 3.2971e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant -0.0142152 6.5453e-01 lowCoverage 1.0000e+00 lowCoverage 0.792123 0.8353345 -0.00500082 5 0.795015 0.800880 -0.0058652 7.3596e-01 0.04943172 weaklyHypometh 1.00000000 1.00000 insignificant 0.81739537 0.11040907 insignificant 1.000000 1.00000 insignificant -0.02291254 0.27142761 lowCoverage 1.00000 lowCoverage 0.7825342 0.8353345 0.0006934 5 0.808189 0.800880 0.0073091 0.12225539 5.2736e-01 insignificant 1.00000 1.0000e+00 insignificant 0.2043726 2.7866e-01 insignificant 1.00000 1.0000e+00 insignificant -0.0086973 7.6648e-01 lowCoverage 1.0000e+00 lowCoverage chr8 129030550 129031550 31714 ENSG00000184090 0.734296 282 9 0.585301 198 10 0.6342305 177 10 0.7279864 249 9 0.8204146 122 9 0.839454 433 9 0.7287626 129 4 0.703149 185 10 0.8494826 151 9 0.8526382 149 9 0.753069 303 10 0.634943 110 8 0.6546698 254 9 0.85528736 71 2 0.7106986 144 9 0.7371424 126 5 0.5146104 66 6 0.4830549 397 9 0.765612 183 9 0.731539 253 9 0.692053 118 10 0.676453 210 9 0.778259 138 9 0.576136 41 2 0.659352 159 9 0.7929977 231 10 0.6905042 166 9 0.7258970 57 4 0.7643573 181 9 0.8103572 242 10 0.7064296 235 10 0.806330 327 9 0.0000000 261 10 0.0326923 124 9 0.0000000 186 7 0.0000000 111 9 0.011111 149 9 0.0265385 411 10 0.857606 166 8 0.845441 314 10 0.798801 246 9 0.7166547 287 9 0.7128040 185 9 0.770979 0.585056 0.6357923 0.782420 0.7835949 0.837828 0.760309 0.7260811 0.7990978 0.8723932 0.804404 0.5933290 0.7033111 0.785055 0.7505879 0.6589966 0.4552282 0.5337066 0.7581890 0.786190 0.727295 0.7304097 0.808192 0.573704 0.779352 0.8126062 0.681793 0.726119 0.7853953 0.814840 0.7273932 0.789185 0.0000000 0.0062305 0.00000000 0.00000000 0.0000000 0.0043614 0.837197 0.858833 0.7958567 0.7470567 0.7720646 4 0.7142140 0.742043 -0.0332930 9 0.709959 0.740649 -0.0306895 0.950916 5.9150e-02 insignificant 1 1.0000e+00 insignificant 0.553352 4.8373e-01 insignificant 1 1.0000000 insignificant -0.00744346 0.8137646 insignificant 1 insignificant 0.7142140 0.0056361 0.70411147 9 0.709959 0.011007 0.69895190 1.0227e-85 1.0000e+00 hypermethylated 5.1136e-83 1.00000000 hypermethylated 5.6150e-26 1.0000e+00 hypermethylated 2.8075e-23 1.0000e+00 hypermethylated 0.7040934 2.1414e-18 hypermethylated 1.0707e-15 hypermethylated 0.714214 0.7821369 -0.0658606 9 0.709959 0.792224 -0.0822649 9.9820e-01 7.9298e-04 weaklyHypometh 1.0000000 1.5781e-01 insignificant 9.7408e-01 2.6924e-03 weaklyHypometh 1.0000000 0.4105553 insignificant -0.07044423 0.10233214 insignificant 1.00000 insignificant 0.742043 0.0056361 0.7374224 9 0.740649 0.011007 0.72964136 7.2900e-92 1.0000e+00 hypermethylated 3.6450e-89 1.0000000 hypermethylated 5.2616e-22 1.0000e+00 hypermethylated 2.6308e-19 1.0000000 hypermethylated 0.7115369 7.3626e-14 hypermethylated 3.6813e-11 hypermethylated 0.742043 0.7821369 -0.03172422 9 0.740649 0.792224 -0.0515755 9.7463e-01 0.00576473 weaklyHypometh 1.00000000 0.82353 insignificant 0.94002001 0.00069378 weaklyHypometh 1.000000 0.69378 insignificant -0.06300077 0.12758110 insignificant 1.00000 insignificant 0.0056361 0.7821369 -0.7602252 9 0.011007 0.792224 -0.7812168 1.00000000 3.2826e-63 hypomethylated 1.00000 1.6413e-60 hypomethylated 1.0000000 3.7573e-16 hypomethylated 1.00000 1.8786e-13 hypomethylated -0.7745377 8.4762e-06 hypomethylated 1.6952e-03 hypomethylated chr8 129030650 129031650 31715 ENSG00000184090 0.741819 324 10 0.606792 456 11 0.6371792 201 11 0.7438241 293 10 0.8253769 138 10 0.845509 543 10 0.7394346 168 5 0.714984 203 11 0.8362300 178 10 0.8508832 155 10 0.760224 410 11 0.627726 119 9 0.6767028 270 10 0.87940613 82 3 0.7309331 167 10 0.7385710 130 5 0.5146104 66 6 0.5114161 427 10 0.778397 247 10 0.752070 348 10 0.709947 136 11 0.694522 217 10 0.791662 195 10 0.592556 78 3 0.659352 159 9 0.8031954 347 11 0.6906682 179 10 0.7289099 77 5 0.7809309 256 10 0.8232684 368 11 0.7250370 370 11 0.808602 410 10 0.0284091 325 11 0.0297203 142 10 0.0227129 503 8 0.1000000 112 9 0.015611 248 10 0.0392774 495 11 0.859027 237 9 0.831520 353 11 0.803624 273 10 0.7235607 301 10 0.7179337 211 10 0.774374 0.605897 0.6385114 0.791574 0.7916448 0.843303 0.767869 0.7355266 0.7906966 0.8689532 0.806815 0.5900024 0.7184314 0.803984 0.7648951 0.6670111 0.4879598 0.5542230 0.7712285 0.799458 0.741526 0.7415708 0.817359 0.589825 0.786007 0.8207584 0.682719 0.728222 0.7995982 0.826953 0.7435729 0.792896 0.0275213 0.0056818 0.02000287 0.08806818 0.0053375 0.0186553 0.840371 0.844167 0.8007881 0.7504612 0.7718151 5 0.7396954 0.779370 -0.0360851 10 0.722444 0.754566 -0.0321218 0.976166 2.3251e-02 weaklyHypometh 1 1.0000e+00 insignificant 0.649281 4.1284e-01 insignificant 1 1.0000000 insignificant -0.00844983 0.7856363 insignificant 1 insignificant 0.7396954 0.0657534 0.69348764 10 0.722444 0.027627 0.69481726 1.4177e-98 1.0000e+00 hypermethylated 1.4177e-95 1.00000000 hypermethylated 6.5251e-27 1.0000e+00 hypermethylated 6.5251e-24 1.0000e+00 hypermethylated 0.6863160 4.7846e-19 hypermethylated 4.7846e-16 hypermethylated 0.739695 0.7854545 -0.0493201 10 0.722444 0.793650 -0.0712057 9.8332e-01 1.7764e-03 weaklyHypometh 1.0000000 2.2205e-01 insignificant 9.3015e-01 5.5310e-03 weaklyHypometh 1.0000000 0.5530977 insignificant -0.06152861 0.12496040 insignificant 1.00000 insignificant 0.779370 0.0657534 0.7280218 10 0.754566 0.027627 0.72693904 3.5575e-101 1.0000e+00 hypermethylated 3.5575e-98 1.0000000 hypermethylated 9.4801e-23 1.0000e+00 hypermethylated 9.4801e-20 1.0000000 hypermethylated 0.6947658 2.8506e-15 hypermethylated 2.8506e-12 hypermethylated 0.779370 0.7854545 -0.01157185 10 0.754566 0.793650 -0.0390840 7.3831e-01 0.01220890 weaklyHypometh 1.00000000 1.00000 insignificant 0.82011923 0.00163655 weaklyHypometh 1.000000 0.81827 insignificant -0.05307877 0.16561805 insignificant 1.00000 insignificant 0.0657534 0.7854545 -0.7366384 10 0.027627 0.793650 -0.7660230 1.00000000 7.5925e-68 hypomethylated 1.00000 7.5925e-65 hypomethylated 1.0000000 1.5676e-16 hypomethylated 1.00000 1.5676e-13 hypomethylated -0.7478446 8.2125e-07 hypomethylated 2.7375e-04 hypomethylated chr8 130530150 130531150 31775 ENSG00000208525,ENSG00000222755 0.734460 166 7 0.600910 128 7 0.7428571 24 4 0.8792440 191 7 0.7785714 61 4 0.846897 177 7 0.4750000 23 0 0.757837 110 7 0.9000000 32 4 0.7891156 42 7 0.845030 145 7 1.000000 5 0 0.8142857 82 7 0.93181818 42 3 0.9142857 50 7 0.7500000 4 0 NA 0 0 0.9117971 311 7 0.801648 96 5 0.816748 121 3 0.828571 24 3 0.595238 17 0 0.876020 59 7 0.791667 18 0 0.908163 28 3 0.8478535 173 7 0.7500000 6 0 0.5416667 14 0 0.8500000 17 0 0.8928571 151 7 0.8530303 45 4 0.900000 19 2 0.7976190 55 4 0.7303922 150 7 0.6031746 78 7 0.6250000 8 0 0.750000 30 2 0.6836364 42 4 0.860819 127 7 0.883839 177 7 0.600315 69 4 0.8207908 128 7 0.8844210 223 7 0.834259 0.465278 0.8222222 0.826389 0.6527778 0.795815 0.662037 0.6495726 0.8055556 0.6518519 0.793651 1.0000000 0.7611111 0.861111 0.8333333 0.7222222 NA 0.9212963 0.6472222 0.726852 0.777778 0.4166667 0.870040 0.611111 0.861111 0.7568462 0.833333 0.851852 0.7916667 0.819444 0.7994949 0.888889 0.7495791 0.6435185 0.55555556 0.58333333 0.5694444 0.6050505 0.766407 0.841880 0.8131127 0.7053571 0.8337568 0 0.8674033 0.872154 -0.0275339 7 0.692750 0.708104 -0.0153541 0.985943 2.5110e-01 insignificant 1 1.0000e+00 insignificant 0.951799 3.6027e-01 insignificant 1 1.0000000 insignificant 0.00184111 0.9670311 lowCoverage 1 lowCoverage 0.8694444 0.7190083 0.11726833 7 0.830428 0.711787 0.11864163 1.6414e-04 9.9984e-01 weaklyHypermeth 3.2829e-03 1.00000000 weaklyHypermeth 9.8522e-03 8.7915e-01 weaklyHypermeth 2.0106e-01 1.0000e+00 insignificant 0.1064597 2.1964e-02 lowCoverage 4.9918e-01 lowCoverage 0.869444 0.8895028 -0.0384833 7 0.830428 0.865501 -0.0350729 9.8049e-01 1.0154e-01 insignificant 1.0000000 1.0000e+00 insignificant 7.5124e-01 6.6093e-01 insignificant 1.0000000 1.0000000 insignificant -0.00527359 0.93311832 lowCoverage 1.00000 lowCoverage 0.875887 0.7190083 0.1458965 7 0.856750 0.711787 0.14496290 1.6256e-05 9.9997e-01 weaklyHypermeth 4.2780e-04 1.0000000 weaklyHypermeth 1.9750e-03 9.6418e-01 weaklyHypermeth 4.9375e-02 1.0000000 weaklyHypermeth 0.1046186 3.8395e-02 lowCoverage 6.7853e-01 lowCoverage 0.875887 0.8895028 -0.00800939 7 0.856750 0.865501 -0.0087516 7.0785e-01 0.67099469 insignificant 1.00000000 1.00000 insignificant 0.13144371 0.83316696 insignificant 1.000000 1.00000 insignificant -0.00711470 0.91405068 lowCoverage 1.00000 lowCoverage 0.7190083 0.8895028 -0.1533771 7 0.711787 0.865501 -0.1537145 0.99999876 3.6252e-05 weaklyHypometh 1.00000 1.3943e-03 weaklyHypometh 0.9628709 5.1910e-03 weaklyHypometh 1.00000 1.8040e-01 insignificant -0.1117333 1.1709e-01 lowCoverage 1.0000e+00 lowCoverage chr8 131066150 131067150 31818 FAM49B ENSG00000153310 0.977778 60 2 0.857577 60 4 0.9070085 74 5 0.9934211 42 1 0.8833333 50 5 0.972235 75 2 0.7704261 54 4 0.975000 48 4 1.0000000 56 4 0.9070635 59 5 0.915839 156 5 0.940580 49 4 0.8856451 72 4 NA 0 0 0.9592308 88 4 0.7726190 33 4 0.9346154 46 4 0.9760000 34 1 0.957949 58 5 0.958059 80 2 0.812137 85 5 0.571970 30 1 0.900476 80 4 0.877778 34 2 0.900000 18 2 0.9145658 87 5 0.7863095 62 4 0.8046154 38 3 0.8038889 50 5 0.9666667 76 5 0.8816563 87 5 0.973506 108 4 0.8995448 67 5 0.8254248 96 4 1.0000000 49 4 0.6333333 22 2 0.863333 67 5 0.9539474 54 5 0.975000 42 1 0.982143 47 1 0.720238 48 1 0.4519231 53 1 1.0000000 24 1 0.925490 0.806435 0.9225742 0.977941 0.9599673 0.924291 0.907526 0.9816176 1.0000000 0.8987220 0.917018 0.8661552 0.9027589 NA 0.8636878 0.9385504 0.9886878 0.8994118 0.8871041 0.955869 0.973291 0.8981729 0.960084 0.903186 0.970588 0.8585640 0.814119 0.929638 0.9515931 0.860294 0.9113537 0.967953 0.9358085 0.9161621 0.95045343 0.98392857 0.9125000 0.8933824 0.958088 0.940126 0.7531513 0.7723416 0.9264706 1 0.9137353 0.894040 0.0146104 4 0.916395 0.868754 0.0476414 0.030213 7.8610e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.031412 8.7172e-01 lowCoverage 1 1.0000000 lowCoverage 0.07392423 0.0477707 lowCoverage 1 lowCoverage 0.9137353 0.9126761 -0.00115608 4 0.916395 0.900583 0.01581214 4.2898e-01 5.5798e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 3.4219e-01 6.8535e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0607911 3.0926e-01 lowCoverage 1.0000e+00 lowCoverage 0.912312 0.9158879 0.0104866 1 0.910878 0.887500 0.0233782 3.0791e-01 2.7701e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage 8.8562e-01 2.8306e-01 lowCoverage 1.0000000 1.0000000 lowCoverage 0.09752755 0.41509288 lowCoverage 1.00000 lowCoverage 0.894040 0.9126761 -0.0197777 5 0.868754 0.900583 -0.03182922 8.4894e-01 2.9137e-01 insignificant 1.0000e+00 1.0000000 insignificant 8.8509e-01 3.5514e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0131332 8.3434e-01 lowCoverage 1.0000e+00 lowCoverage 0.907648 0.9158879 0.00544094 1 0.900458 0.887500 0.0129581 3.9637e-01 0.33027732 lowCoverage 1.00000000 1.00000 lowCoverage 0.81111590 0.23596247 lowCoverage 1.000000 1.00000 lowCoverage 0.02360332 0.84078010 lowCoverage 1.00000 lowCoverage 0.9228395 0.9158879 0.0303164 1 0.924116 0.887500 0.0366156 0.51843601 5.2249e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.8419810 5.9246e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.0367365 7.6808e-01 lowCoverage 1.0000e+00 lowCoverage chr8 136987950 136988950 31937 ENSG00000199652 0.905899 112 5 0.943832 334 5 0.7237597 112 5 0.8225806 119 5 0.9861111 40 3 0.924045 246 6 0.8676471 126 5 0.856225 226 5 0.8181818 39 3 0.9000000 44 5 0.800000 13 1 0.953159 68 5 0.8748264 157 5 1.00000000 3 0 0.9443723 86 5 0.5714286 42 3 1.0000000 14 1 0.8681467 121 5 0.969697 40 5 0.862770 238 6 0.480000 13 2 0.914286 28 3 NA 0 0 0.884839 125 6 0.666667 3 0 1.0000000 5 0 0.9209402 38 3 0.9000000 23 2 0.9030303 61 6 0.7917569 171 5 0.9714960 310 5 0.776582 302 5 NA 0 0 0.4929182 54 5 0.7500000 5 0 1.0000000 1 0 0.543366 119 5 0.7111780 293 6 0.975210 102 5 0.969307 132 5 0.939305 97 5 1.0000000 9 1 0.7529419 125 5 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0.9160550 0.936052 -0.0227239 5 0.879161 0.863976 0.0151847 0.761840 1.8635e-01 insignificant 1 1.0000e+00 insignificant 0.496327 4.4193e-01 insignificant 1 1.0000000 insignificant 0.04239791 0.4202629 lowCoverage 1 lowCoverage 0.9160550 0.6483051 0.25999525 5 0.879161 0.641590 0.23757102 1.0138e-13 1.0000e+00 hypermethylated 6.3364e-12 1.00000000 hypermethylated 4.9479e-06 9.9998e-01 hypermethylated 2.3561e-04 1.0000e+00 hypermethylated 0.1801415 1.1440e-01 lowCoverage 1.0000e+00 lowCoverage 0.916055 0.9397849 -0.0245870 5 0.879161 0.909671 -0.0305108 9.5578e-01 2.8645e-01 insignificant 1.0000000 1.0000e+00 insignificant 8.9810e-01 4.2931e-01 insignificant 1.0000000 1.0000000 insignificant -0.04771879 0.37676679 lowCoverage 1.00000 lowCoverage 0.936052 0.6483051 0.2781776 5 0.863976 0.641590 0.22238631 1.1908e-09 9.9234e-01 hypermethylated 4.7633e-08 1.0000000 hypermethylated 8.8199e-05 9.8882e-01 hypermethylated 3.6750e-03 1.0000000 hypermethylated 0.1377436 2.1800e-01 lowCoverage 1.0000e+00 lowCoverage 0.936052 0.9397849 -0.00076268 5 0.863976 0.909671 -0.0456955 6.9197e-01 0.40107425 insignificant 1.00000000 1.00000 insignificant 0.66341600 0.49818647 insignificant 1.000000 1.00000 insignificant -0.09011670 0.18487200 lowCoverage 1.00000 lowCoverage 0.6483051 0.9397849 -0.2905864 5 0.641590 0.909671 -0.2680818 0.99998960 8.6955e-07 hypomethylated 1.00000 5.4347e-05 hypomethylated 0.9999993 3.3201e-04 hypomethylated 1.00000 2.0751e-02 hypomethylated -0.2278603 6.3793e-02 lowCoverage 1.0000e+00 lowCoverage chr8 141416550 141417550 31972 ENSG00000211505 0.924472 91 6 0.809524 25 3 0.8408231 170 6 0.9687500 52 6 0.7500000 68 6 0.880292 133 8 0.9791667 57 6 0.849054 103 6 0.9014850 120 6 0.9240354 147 5 0.921521 316 8 0.864815 55 5 0.6666667 8 1 1.00000000 3 0 1.0000000 4 0 0.9500000 25 3 0.8833333 71 5 0.9523810 46 4 0.994949 126 6 0.735000 106 6 0.958681 84 7 0.916667 7 0 0.733317 139 6 0.666667 12 1 0.972222 39 3 0.7500000 27 3 0.7083333 15 1 0.6666667 5 0 1.0000000 6 1 0.9479132 158 6 1.0000000 36 3 0.750000 22 3 0.9207337 326 6 0.9722222 20 1 1.0000000 28 3 0.5000000 14 1 0.875000 31 3 1.0000000 30 3 0.901937 102 6 0.629630 11 1 0.953125 51 4 0.8650794 54 5 0.8685030 57 6 0.909091 1.000000 0.8000000 1.000000 1.0000000 0.900000 1.000000 1.0000000 0.8750000 1.0000000 0.884615 0.5000000 1.0000000 1.000000 1.0000000 NA NA 1.0000000 1.0000000 1.000000 1.000000 1.0000000 1.000000 1.000000 1.000000 1.0000000 0.833333 1.000000 1.0000000 1.000000 1.0000000 1.000000 1.0000000 0.9166667 1.00000000 1.00000000 1.0000000 1.0000000 0.833333 0.888889 0.7500000 1.0000000 0.9411765 0 0.9310545 0.946886 -0.0297908 3 0.888900 0.943549 -0.0546494 0.961577 2.3168e-02 lowCoverage 1 1.0000e+00 lowCoverage 0.428398 1.3758e-01 lowCoverage 1 1.0000000 lowCoverage 0.05060794 0.2721249 lowCoverage 1 lowCoverage 0.9310545 0.9242762 -0.00058024 5 0.888900 0.916975 -0.02807448 7.8801e-01 1.9926e-01 insignificant 1.0000e+00 1.00000000 insignificant 7.3932e-01 3.5493e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0118208 8.8885e-01 lowCoverage 1.0000e+00 lowCoverage 0.931054 0.8654545 0.0578782 4 0.888900 0.869784 0.0191160 7.5322e-03 8.1644e-01 lowCoverage 0.3766112 1.0000e+00 lowCoverage 8.6840e-02 7.8228e-01 lowCoverage 1.0000000 1.0000000 lowCoverage 0.04615872 0.47228758 lowCoverage 1.00000 lowCoverage 0.946886 0.9242762 0.0168485 3 0.943549 0.916975 0.02657489 1.2681e-01 9.1192e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 7.0773e-01 7.2568e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage -0.0387871 6.7006e-01 lowCoverage 1.0000e+00 lowCoverage 0.946886 0.8654545 0.07677458 3 0.943549 0.869784 0.0737654 8.9127e-05 0.94613746 lowCoverage 0.00685595 1.00000 lowCoverage 0.01940016 0.73469052 lowCoverage 0.776006 1.00000 lowCoverage -0.00444922 0.94963129 lowCoverage 1.00000 lowCoverage 0.9242762 0.8654545 0.0603883 3 0.916975 0.869784 0.0471905 0.03622212 1.7560e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.1841558 7.6390e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.0343379 7.2933e-01 lowCoverage 1.0000e+00 lowCoverage chr8 141667850 141668850 31975 ENSG00000203371 0.856681 286 8 0.671351 150 8 0.5956343 151 8 0.8752626 299 8 0.7135417 54 7 0.896917 298 8 0.8248611 126 6 0.829422 177 8 0.7738100 163 8 0.8049468 117 8 0.825556 191 8 0.833333 45 6 0.7755442 207 8 0.84242424 41 3 0.7823079 176 8 0.5471861 51 8 0.8435546 74 8 0.4969221 269 8 0.894741 162 8 0.882567 220 8 0.852976 50 6 0.650978 176 8 0.792929 200 8 0.902967 99 8 0.609321 132 8 0.8908926 219 8 0.7858974 177 8 0.8848485 70 7 0.7779622 195 8 0.8819805 165 8 0.6257800 214 8 0.915992 326 8 0.0907257 213 8 0.0281863 200 8 0.1432836 346 4 0.0416667 142 8 0.134853 138 8 0.0048077 241 8 0.727555 228 8 0.851506 226 8 0.787442 226 8 0.8205815 216 8 0.6927223 274 8 0.854547 0.685099 0.5802220 0.873158 0.7180755 0.892669 0.826694 0.8266485 0.7759540 0.8036357 0.827743 0.8293936 0.7748911 0.813098 0.7850811 0.6260114 0.8267892 0.4950495 0.8911875 0.882869 0.860928 0.6612753 0.790374 0.906284 0.617029 0.8823368 0.788689 0.883846 0.7788260 0.886295 0.6212964 0.915318 0.1010378 0.0306038 0.10757647 0.04796163 0.1620364 0.0055340 0.715536 0.850064 0.8845525 0.8180256 0.6890278 8 0.7887627 0.802274 -0.0130439 8 0.756708 0.822898 -0.0661902 0.885094 4.9166e-01 insignificant 1 1.0000e+00 insignificant 0.687366 4.2442e-01 insignificant 1 1.0000000 insignificant -0.01938227 0.6445606 insignificant 1 insignificant 0.7887627 0.1218750 0.70751655 8 0.756708 0.071342 0.68536649 1.5558e-62 1.0000e+00 hypermethylated 5.1861e-60 1.00000000 hypermethylated 1.1900e-19 1.0000e+00 hypermethylated 2.9750e-17 1.0000e+00 hypermethylated 0.7044076 1.4210e-13 hypermethylated 2.8420e-11 hypermethylated 0.788763 0.7965812 0.0035271 8 0.756708 0.698398 0.0583105 6.1959e-01 6.5098e-01 insignificant 1.0000000 1.0000e+00 insignificant 5.9903e-01 3.6437e-01 insignificant 1.0000000 1.0000000 insignificant 0.00236673 0.95274368 insignificant 1.00000 insignificant 0.802274 0.1218750 0.7240345 8 0.822898 0.071342 0.75155673 3.4416e-50 1.0000e+00 hypermethylated 8.6041e-48 1.0000000 hypermethylated 2.7324e-17 1.0000e+00 hypermethylated 6.8311e-15 1.0000000 hypermethylated 0.7237898 5.0657e-12 hypermethylated 1.0131e-09 hypermethylated 0.802274 0.7965812 0.01604663 8 0.822898 0.698398 0.1245007 4.9458e-01 0.74456047 insignificant 1.00000000 1.00000 insignificant 0.39392220 0.54221778 insignificant 1.000000 1.00000 insignificant 0.02174899 0.62673877 insignificant 1.00000 insignificant 0.1218750 0.7965812 -0.7141914 8 0.071342 0.698398 -0.6270560 1.00000000 1.9227e-41 hypomethylated 1.00000 4.8069e-39 hypomethylated 1.0000000 2.0659e-11 hypomethylated 1.00000 5.1649e-09 hypomethylated -0.7020408 5.6316e-08 hypomethylated 5.6316e-05 hypomethylated chr8 142214050 142215050 32006 DENND3 ENSG00000105339 0.530221 348 12 0.473056 347 13 0.615472 150 12 0.67443 272 8 0.5474994 152 13 0.5790119 323 11 0.3944337 230 12 0.582747 211 13 0.545946 140 11 0.5938893 156 11 0.584271 475 13 0.524669 72 7 0.5968314 178 11 0.77161 109 10 0.580075 163 12 0.4261999 77 6 0.5022449 68 4 0.548267 259 8 0.5800911 279 12 0.6392577 265 12 0.584492 82 7 0.760784 56 2 0.51395 197 11 0.5257277 138 12 0.70514 125 6 0.615023 321 13 0.614318 134 8 0.525641 76 5 0.620557 198 11 0.524350 295 12 0.542854 316 12 0.6245791 294 10 0.612845 246 13 0.696594 169 9 0.754369 252 10 0.658951 35 3 0.665640 219 11 0.6148300 252 13 0.586245 248 9 0.55538 294 10 0.746035 330 10 0.675422 184 5 0.669990 261 9 0.687224 0.5889809 0.633151 0.645273 0.725282 0.737344 0.5690665 0.620339 0.6802093 0.6759483 0.7114022 0.603143 0.6988288 0.71391 0.700667 0.521686 0.6340337 0.6232335 0.6700111 0.7314476 0.727930 0.77568485 0.605005 0.7027910 0.713216 0.743547 0.609139 0.705051 0.708263 0.6362038 0.646831 0.7256848 0.669785 0.647239 0.8061003 0.687272 0.697013 0.6704032 0.685794 0.651547 0.68406 0.765503 0.6561572 2 0.6814884 0.6748879 -0.00777510 12 0.615849 0.63018 -0.01433563 0.967353 0.62115402 insignificant 1 1.00000 insignificant 0.99494524 0.678065 insignificant 1.00000 1 insignificant -0.0319406 0.2817887 insignificant 1 insignificant 0.6823529 0.7118500 -0.02166864 13 0.579301 0.672256 -0.09295450 1.3411e-02 3.9297e-06 weaklyHypometh 1.3547e-01 1.9648e-03 weaklyHypometh 2.2054e-01 6.9072e-04 weaklyHypometh 1.0000e+00 0.34536190 insignificant -0.1026939 3.2641e-03 weaklyHypometh 9.8913e-02 weaklyHypometh 0.6808261 0.793470 -0.02197139 10 0.546742 0.616224 -0.06948190 9.4673e-01 9.1990e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4178e-01 4.5890e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.08210423 7.4511e-02 insignificant 1.0000e+00 insignificant 0.6781349 0.7118500 -0.0145984 12 0.588243 0.672256 -0.0840123 1.6549e-03 3.1816e-04 weaklyHypometh 2.1493e-02 0.079540 weaklyHypometh 3.1312e-02 0.01613597 weaklyHypometh 3.5991e-01 1.00000 insignificant -0.0707533 3.9698e-02 weaklyHypometh 5.8636e-01 insignificant 0.6743140 0.793470 -0.0141832 9 0.55379 0.616224 -0.0624345 9.2233e-01 3.4043e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.9644e-01 7.0200e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.05016366 2.5476e-01 insignificant 1.0000e+00 insignificant 0.711850 0.795282 -0.0216361 10 0.672256 0.660240 0.0120161 4.2952e-02 2.7856e-02 weaklyHypometh 1.0000e+00 3.0611e-01 insignificant 1.8131e-01 1.2979e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.0205897 0.62634045 insignificant 1.000000 insignificant chr8 142321350 142322350 32013 SLC45A4 ENSG00000022567 0.947982 142 6 0.835704 105 6 0.716239 79 6 0.93702 185 6 0.8944444 35 1 0.7305296 159 6 0.9525295 78 6 0.943627 74 6 0.813131 53 4 0.9924242 56 2 0.909232 129 6 0.993333 32 1 0.8174603 52 1 0.00000 1 0 0.826190 48 1 0.9880952 32 1 0.8636364 22 1 0.899425 104 2 0.9451389 81 6 0.9545635 115 6 0.666667 35 4 0.876543 38 1 0.95802 101 6 0.8680556 76 3 0.93410 184 6 0.939815 99 6 0.990196 74 6 0.458333 26 1 0.913343 74 6 0.894444 94 6 0.910684 95 6 0.9308776 147 6 0.727092 100 6 0.911341 143 6 0.989583 66 5 0.835317 107 6 0.745331 74 6 0.9031191 112 6 0.833226 134 6 0.82000 123 6 0.901465 123 3 0.841608 113 3 0.911596 169 6 0.925094 0.8701838 0.844084 0.922387 0.884098 0.912275 0.9517252 0.924717 0.8604393 0.9577426 0.9261963 0.972110 0.8831367 NA 0.835168 0.961007 NA 0.8819994 0.9814220 0.9212101 0.605505 0.88718994 0.955283 0.8761468 0.966940 0.928135 0.994603 0.833132 0.877505 0.9588175 0.907692 0.9560608 0.902985 0.970718 0.9888825 0.924640 0.918913 0.9467127 0.895196 0.894178 0.90685 0.874065 0.9442886 1 0.9119696 0.9213052 -0.01153940 6 0.781069 0.85954 -0.07847526 0.873824 0.46301492 insignificant 1 1.00000 insignificant 0.57738461 0.682661 insignificant 1.00000 1 insignificant -0.0137210 0.8339627 lowCoverage 1 lowCoverage 0.9125475 0.8791946 0.00967251 6 0.911247 0.870726 0.04052046 2.0081e-02 3.8753e-03 weaklyHypermeth 1.9496e-01 4.3059e-01 insignificant 6.6382e-02 7.5196e-02 insignificant 6.6382e-01 1.00000000 insignificant -0.0039287 9.5153e-01 lowCoverage 1.0000e+00 lowCoverage 0.9125475 0.882979 0.03100571 6 0.911247 0.857260 0.05398722 7.2549e-02 4.6998e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.4337e-01 4.6916e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01354361 7.9571e-01 lowCoverage 1.0000e+00 lowCoverage 0.9221902 0.8795987 0.0283901 6 0.930973 0.889194 0.0417785 8.7522e-03 5.3146e-01 weaklyHypermeth 1.0060e-01 1.000000 insignificant 1.7421e-01 0.34275447 insignificant 1.0000e+00 1.00000 insignificant 0.0097923 8.7320e-01 lowCoverage 1.0000e+00 lowCoverage 0.9221154 0.882979 0.0579948 6 0.91947 0.857260 0.0622084 2.3670e-04 6.9764e-01 weaklyHypermeth 1.5780e-02 1.0000e+00 weaklyHypermeth 1.2110e-02 2.9825e-01 weaklyHypermeth 7.1237e-01 1.0000e+00 insignificant 0.00017743 9.9706e-01 lowCoverage 1.0000e+00 lowCoverage 0.875000 0.883156 0.0451271 6 0.782051 0.877651 -0.0955999 2.0605e-02 4.4934e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 1.4150e-01 5.9301e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.0096149 0.83972311 lowCoverage 1.000000 lowCoverage chr8 144168150 144169150 32030 CYP11B2 ENSG00000179142 0.743807 199 7 0.385376 137 10 0.256383 205 7 0.67827 199 7 0.4702731 103 7 0.7142841 284 7 0.5441034 187 9 0.543557 161 7 0.468978 217 7 0.6337868 130 7 0.623378 222 10 0.409921 78 7 0.2638228 170 7 0.75151 134 7 0.389224 210 7 0.5598485 57 7 0.2114512 49 5 0.438129 196 7 0.1935065 74 7 0.6817148 245 7 0.502914 66 5 0.349722 156 7 0.42135 148 7 0.5537415 67 7 0.65300 43 5 0.569333 216 9 0.577869 129 7 0.589653 68 7 0.417708 118 7 0.603841 191 7 0.397078 228 7 0.6296205 217 7 0.037483 202 9 0.000000 50 7 0.000000 322 10 0.035714 35 5 0.153952 224 7 0.0087753 217 7 0.627697 141 7 0.80797 180 7 0.572150 104 3 0.414206 151 7 0.363884 136 9 0.760347 0.5245894 0.376450 0.689074 0.515368 0.693090 0.5881707 0.555666 0.5095471 0.6435519 0.7205464 0.501904 0.2533204 0.74312 0.497191 0.665450 0.2134108 0.4709607 0.2104237 0.6953540 0.510356 0.38027065 0.591886 0.6000000 0.805289 0.615625 0.580046 0.575404 0.415701 0.5902001 0.383328 0.6567766 0.052830 0.000000 0.0000000 0.050197 0.230677 0.0094175 0.576291 0.799007 0.57010 0.553042 0.4683237 7 0.5649371 0.5355191 0.02989342 7 0.492553 0.48440 0.00815822 0.531178 0.86155044 insignificant 1 1.00000 insignificant 0.78656548 0.634805 insignificant 1.00000 1 insignificant -0.0240855 0.6300540 insignificant 1 insignificant 0.5649371 0.0580952 0.50183743 7 0.492553 0.040956 0.45159735 5.7505e-33 1.0000e+00 hypermethylated 1.9168e-30 1.0000e+00 hypermethylated 5.3658e-17 1.0000e+00 hypermethylated 2.6829e-14 1.00000000 hypermethylated 0.4587456 7.8859e-10 hypermethylated 1.1266e-07 hypermethylated 0.5649371 0.620787 -0.02572550 7 0.492553 0.547556 -0.05500289 8.3153e-01 2.3546e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4225e-01 2.7565e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.05911536 5.2965e-01 insignificant 1.0000e+00 insignificant 0.5355191 0.0580952 0.4717394 7 0.484395 0.040956 0.4434391 2.3972e-30 1.0000e+00 hypermethylated 7.9907e-28 1.000000 hypermethylated 1.6520e-15 1.00000000 hypermethylated 8.2602e-13 1.00000 hypermethylated 0.4828311 1.2892e-09 hypermethylated 2.5784e-07 hypermethylated 0.5355191 0.620787 -0.0634555 7 0.48440 0.547556 -0.0631611 9.1507e-01 7.5637e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 8.9160e-01 2.4315e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03502990 6.9546e-01 insignificant 1.0000e+00 insignificant 0.058095 0.620787 -0.5335824 7 0.040956 0.547556 -0.5066002 1.0000e+00 5.5639e-19 hypomethylated 1.0000e+00 1.8546e-16 hypomethylated 1.0000e+00 1.2197e-10 hypomethylated 1.0000000 3.0494e-08 hypomethylated -0.5178610 0.00187723 weaklyHypometh 0.097068 weaklyHypometh chr8 144168350 144169350 32031 CYP11B2 ENSG00000179142 0.743807 199 7 0.385376 137 10 0.256383 205 7 0.67827 199 7 0.4702731 103 7 0.7142841 284 7 0.5441034 187 9 0.543557 161 7 0.468978 217 7 0.6337868 130 7 0.623378 222 10 0.409921 78 7 0.2638228 170 7 0.75151 134 7 0.389224 210 7 0.5598485 57 7 0.2114512 49 5 0.438129 196 7 0.1935065 74 7 0.6817148 245 7 0.502914 66 5 0.349722 156 7 0.42135 148 7 0.5537415 67 7 0.65300 43 5 0.569333 216 9 0.577869 129 7 0.589653 68 7 0.417708 118 7 0.603841 191 7 0.397078 228 7 0.6296205 217 7 0.037483 202 9 0.000000 50 7 0.000000 322 10 0.035714 35 5 0.153952 224 7 0.0087753 217 7 0.627697 141 7 0.80797 180 7 0.572150 104 3 0.414206 151 7 0.363884 136 9 0.760347 0.5245894 0.376450 0.689074 0.515368 0.693090 0.5881707 0.555666 0.5095471 0.6435519 0.7205464 0.501904 0.2533204 0.74312 0.497191 0.665450 0.2134108 0.4709607 0.2104237 0.6953540 0.510356 0.38027065 0.591886 0.6000000 0.805289 0.615625 0.580046 0.575404 0.415701 0.5902001 0.383328 0.6567766 0.052830 0.000000 0.0000000 0.050197 0.230677 0.0094175 0.576291 0.799007 0.57010 0.553042 0.4683237 7 0.5649371 0.5355191 0.02989342 7 0.492553 0.48440 0.00815822 0.531178 0.86155044 insignificant 1 1.00000 insignificant 0.78656548 0.634805 insignificant 1.00000 1 insignificant -0.0240855 0.6300540 insignificant 1 insignificant 0.5649371 0.0580952 0.50183743 7 0.492553 0.040956 0.45159735 5.7505e-33 1.0000e+00 hypermethylated 1.9168e-30 1.0000e+00 hypermethylated 5.3658e-17 1.0000e+00 hypermethylated 2.6829e-14 1.00000000 hypermethylated 0.4587456 7.8859e-10 hypermethylated 1.1266e-07 hypermethylated 0.5649371 0.620787 -0.02572550 7 0.492553 0.547556 -0.05500289 8.3153e-01 2.3546e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4225e-01 2.7565e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.05911536 5.2965e-01 insignificant 1.0000e+00 insignificant 0.5355191 0.0580952 0.4717394 7 0.484395 0.040956 0.4434391 2.3972e-30 1.0000e+00 hypermethylated 7.9907e-28 1.000000 hypermethylated 1.6520e-15 1.00000000 hypermethylated 8.2602e-13 1.00000 hypermethylated 0.4828311 1.2892e-09 hypermethylated 2.5784e-07 hypermethylated 0.5355191 0.620787 -0.0634555 7 0.48440 0.547556 -0.0631611 9.1507e-01 7.5637e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 8.9160e-01 2.4315e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03502990 6.9546e-01 insignificant 1.0000e+00 insignificant 0.058095 0.620787 -0.5335824 7 0.040956 0.547556 -0.5066002 1.0000e+00 5.5639e-19 hypomethylated 1.0000e+00 1.8546e-16 hypomethylated 1.0000e+00 1.2197e-10 hypomethylated 1.0000000 3.0494e-08 hypomethylated -0.5178610 0.00187723 weaklyHypometh 0.097068 weaklyHypometh chr8 144652550 144653550 32034 MAFA ENSG00000182759 0.818877 518 16 0.845142 528 16 0.695829 584 16 0.89131 484 13 0.7987241 313 15 0.8808250 759 16 0.7744452 446 15 0.816344 431 16 0.757423 448 15 0.8259080 464 16 0.829690 683 16 0.747394 267 16 0.8565622 486 16 0.82977 268 9 0.821231 491 16 0.7694157 248 16 0.7429590 87 7 0.779594 671 15 0.7426092 591 16 0.8616236 521 16 0.887953 278 16 0.498869 257 13 0.89467 395 16 0.7925552 283 16 0.79965 320 13 0.807925 518 16 0.756562 437 17 0.776518 246 15 0.738123 484 15 0.894706 500 14 0.740760 486 16 0.8273898 621 16 0.583798 419 16 0.557167 458 16 0.698563 558 12 0.503725 161 14 0.611684 382 17 0.7508409 533 16 0.512874 507 16 0.55111 469 15 0.548496 348 14 0.468426 572 14 0.448006 389 14 0.865173 0.8255921 0.696579 0.883989 0.849813 0.872699 0.7983212 0.826939 0.8442704 0.8661103 0.8420878 0.819206 0.8614841 0.83740 0.857066 0.785327 0.7639617 0.7182816 0.8672177 0.8812193 0.904611 0.51080882 0.927498 0.8222215 0.834766 0.852140 0.790988 0.874088 0.796573 0.8829075 0.778313 0.8803643 0.608393 0.551172 0.7707041 0.437184 0.683365 0.6928831 0.473935 0.553842 0.57729 0.479535 0.4878777 12 0.8342672 0.8294301 -0.00033596 16 0.798618 0.80205 -0.00342747 0.765655 0.69366655 insignificant 1 1.00000 insignificant 0.49175394 0.507413 insignificant 1.00000 1 insignificant 0.0196434 0.5585175 insignificant 1 insignificant 0.8342672 0.6288331 0.18729566 16 0.798618 0.635841 0.16277669 1.7235e-27 8.8896e-01 weaklyHypermeth 2.1544e-25 1.0000e+00 weaklyHypermeth 9.2498e-08 7.8604e-01 weaklyHypermeth 6.1665e-06 1.00000000 weaklyHypermeth 0.1866541 3.1436e-03 weaklyHypermeth 9.8913e-02 weaklyHypermeth 0.8342672 0.482276 0.34197002 16 0.798618 0.504574 0.29404372 1.2218e-57 9.9538e-01 hypermethylated 1.2218e-54 1.0000e+00 hypermethylated 7.0902e-23 9.9058e-01 hypermethylated 7.0902e-20 1.0000e+00 hypermethylated 0.29850167 6.5297e-06 hypermethylated 1.3059e-03 hypermethylated 0.8294301 0.6288331 0.1924237 16 0.802045 0.635841 0.1662042 1.6623e-17 5.6754e-01 weaklyHypermeth 1.6623e-15 1.000000 weaklyHypermeth 8.2964e-06 0.60083468 weaklyHypermeth 4.6091e-04 1.00000 weaklyHypermeth 0.1670106 5.0520e-03 weaklyHypermeth 1.5473e-01 insignificant 0.8294301 0.482276 0.3314738 16 0.80205 0.504574 0.2974712 2.3766e-36 9.2606e-01 hypermethylated 2.3766e-33 1.0000e+00 hypermethylated 7.7629e-17 9.5386e-01 hypermethylated 7.7629e-14 1.0000e+00 hypermethylated 0.27885823 1.9586e-06 hypermethylated 6.5286e-04 hypermethylated 0.628833 0.482276 0.1603799 16 0.635841 0.504574 0.1312670 2.2267e-09 5.5116e-01 weaklyHypermeth 2.2267e-06 1.0000e+00 weaklyHypermeth 9.5320e-05 9.1328e-01 weaklyHypermeth 0.0476599 1.0000e+00 weaklyHypermeth 0.1118476 0.03233262 weaklyHypermeth 0.567239 insignificant chr8 144673450 144674450 32036 MAFA ENSG00000182759 0.942521 320 11 0.868043 274 9 0.777420 378 12 0.94555 215 10 0.8638052 258 10 0.9301611 393 12 0.8931637 378 12 0.901227 311 12 0.931888 290 12 0.9459170 368 12 0.903045 431 12 0.908408 229 11 0.9212459 282 12 0.91667 93 5 0.911238 356 12 0.8781087 184 9 0.8014835 155 7 0.938436 288 10 0.9378911 410 12 0.8640166 376 12 0.907240 206 12 0.892036 174 9 0.82189 297 12 0.8935088 247 13 0.98485 99 9 0.849379 413 12 0.874895 314 12 0.776608 219 11 0.834602 313 12 0.950432 395 12 0.868417 362 12 0.9446538 487 12 0.818106 271 12 0.795778 311 12 0.885572 229 8 0.795420 123 9 0.766122 229 12 0.8377559 422 12 0.877237 282 9 0.93623 398 11 0.901301 182 9 0.862501 315 9 0.935705 243 9 0.959120 0.8738328 0.842815 0.935493 0.879555 0.935108 0.8942057 0.912167 0.9121231 0.9419352 0.9083867 0.923880 0.9177669 0.91601 0.911193 0.871687 0.8319347 0.9023245 0.9297705 0.9305436 0.917117 0.88631136 0.900021 0.9345043 0.983846 0.937443 0.830450 0.872779 0.909128 0.9261120 0.941086 0.9474735 0.836582 0.895817 0.9060382 0.863902 0.899029 0.8872873 0.899083 0.927544 0.90373 0.891860 0.9322044 8 0.9148439 0.9143505 -0.00538042 12 0.888984 0.86990 0.01908112 0.944301 0.66916080 insignificant 1 1.00000 insignificant 0.91886422 0.567894 insignificant 1.00000 1 insignificant 0.0158029 0.4375167 insignificant 1 insignificant 0.9148439 0.8883281 0.02375539 12 0.888984 0.755473 0.13351084 8.9549e-04 8.6274e-02 weaklyHypermeth 1.1481e-02 1.0000e+00 weaklyHypermeth 1.1130e-01 4.3170e-02 inconclusive 1.0000e+00 1.00000000 insignificant 0.0825527 2.4239e-03 weaklyHypermeth 8.3584e-02 weaklyHypermeth 0.9148297 0.899296 -0.00010555 9 0.880445 0.922729 -0.04228447 3.7209e-01 1.0023e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.8843e-01 4.7839e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.00358376 8.4855e-01 insignificant 1.0000e+00 insignificant 0.9143505 0.8883281 0.0312516 12 0.869903 0.755473 0.1144297 1.9209e-02 5.0956e-01 weaklyHypermeth 2.0010e-01 1.000000 insignificant 2.0409e-01 0.52280986 insignificant 1.0000e+00 1.00000 insignificant 0.0667498 1.5030e-02 weaklyHypermeth 3.0061e-01 insignificant 0.9143262 0.899296 0.0030889 9 0.85990 0.922729 -0.0628334 4.1677e-01 8.9654e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 6.4289e-01 8.9658e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01938665 4.0796e-01 insignificant 1.0000e+00 insignificant 0.888889 0.899296 -0.0373324 9 0.813587 0.922729 -0.1091423 6.3577e-01 2.4399e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.0426e-01 1.4562e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.0861365 0.00417317 weaklyHypometh 0.148210 insignificant chr8 145021350 145022350 32041 NRBP2 ENSG00000185189 0.805218 166 6 0.826252 110 5 0.915235 135 5 0.95476 241 7 0.8148148 60 5 0.8195716 281 6 0.8653347 63 5 0.924439 154 5 0.781186 103 5 0.9451087 150 5 0.890534 245 5 1.000000 38 4 0.8065972 151 5 0.95294 155 5 0.973749 141 5 0.9733333 62 4 0.8000000 5 0 0.857685 243 6 0.9097420 259 5 0.8688200 198 5 0.950000 75 5 0.902564 60 5 0.99020 79 5 0.9170692 120 5 0.86515 59 5 0.838235 111 6 0.733108 224 5 0.927251 85 5 0.816917 220 5 0.730013 201 5 0.854034 146 5 0.8560452 173 5 0.525144 121 5 0.536364 50 4 0.945000 181 5 0.730000 24 4 0.431328 152 5 0.7339558 160 6 0.856954 185 7 0.94450 155 6 0.850199 164 6 0.659702 183 5 0.792045 135 7 0.815617 0.8224586 0.923223 0.939319 0.989583 0.949853 0.8549732 0.934914 0.9462623 0.9508322 0.8893470 1.000000 0.9766276 0.94623 0.969775 0.968750 0.9930408 0.8583421 0.9128407 0.7947491 0.976562 0.88952324 0.986213 0.9870169 0.858665 0.770680 0.898462 0.943695 0.985210 0.9688450 0.863745 0.7996620 0.753344 0.539773 0.9742187 0.792187 0.620779 0.7646240 0.793770 0.965208 0.97217 0.990919 0.9068182 4 0.9097668 0.9058672 0.00250096 5 0.726219 0.77135 -0.04513401 0.650850 0.13330325 insignificant 1 1.00000 insignificant 0.89984582 0.590271 insignificant 1.00000 1 insignificant 0.0192173 0.4947392 lowCoverage 1 lowCoverage 0.9097387 0.7223837 0.17818356 5 0.702413 0.565949 0.13646392 1.7446e-10 9.9990e-01 weaklyHypermeth 7.9302e-09 1.0000e+00 weaklyHypermeth 1.0538e-04 9.9999e-01 weaklyHypermeth 4.0531e-03 1.00000000 weaklyHypermeth 0.2339673 2.7682e-02 lowCoverage 4.5380e-01 lowCoverage 0.9094595 0.922046 -0.01563336 5 0.653597 0.653471 0.00012589 9.9182e-01 3.8389e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7996e-01 5.7674e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.06358539 2.5633e-01 lowCoverage 1.0000e+00 lowCoverage 0.9057456 0.7223837 0.1723766 5 0.742772 0.565949 0.1768230 2.6234e-07 9.9939e-01 weaklyHypermeth 7.4955e-06 1.000000 weaklyHypermeth 8.2292e-05 0.99994699 weaklyHypermeth 3.2917e-03 1.00000 weaklyHypermeth 0.2147501 3.7054e-02 lowCoverage 5.7704e-01 lowCoverage 0.9059278 0.923171 -0.0167626 5 0.79422 0.653471 0.1407465 8.0332e-01 7.6227e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.8956e-01 9.5243e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.04436811 4.2917e-01 insignificant 1.0000e+00 insignificant 0.722384 0.922693 -0.1945824 5 0.565949 0.691839 -0.1258899 9.9999e-01 1.0966e-03 weaklyHypometh 1.0000e+00 1.8587e-02 weaklyHypometh 9.9999e-01 8.9983e-03 weaklyHypometh 1.0000000 1.5786e-01 insignificant -0.1703820 0.09487131 lowCoverage 1.000000 lowCoverage chr8 145032850 145033850 32042 NRBP2 ENSG00000185189 0.821193 101 6 0.824735 110 4 0.794900 86 6 0.90739 97 5 0.6453598 57 5 0.7983808 115 6 0.4766667 53 2 0.615973 138 10 0.579191 89 10 0.6900175 126 11 0.742495 129 7 0.544898 51 4 0.7703391 171 10 0.91119 82 6 0.750082 125 10 0.2587719 47 2 0.1428571 28 1 0.676264 128 4 0.8496368 189 9 0.8188559 96 6 0.563600 52 6 0.621503 88 8 0.65130 44 4 0.7160494 26 1 0.66346 44 4 0.640018 126 4 0.654563 88 6 0.292430 41 2 0.744647 164 5 0.864484 200 9 0.876512 241 10 0.9181319 96 6 0.531046 135 7 0.419287 138 7 0.000000 26 2 0.632143 32 1 0.439543 116 6 0.6179052 230 10 0.751429 88 5 0.64491 118 5 0.710606 56 2 0.672262 84 8 0.715043 72 5 0.845110 0.7046195 0.614982 0.926399 0.735383 0.764737 0.6286768 0.724335 0.6653388 0.7762967 0.8058608 0.824879 0.7852652 0.81678 0.828771 0.448707 0.5108783 0.8049436 0.8347201 0.7967033 0.756385 0.82910839 0.755311 0.5662393 0.848576 0.843720 0.779050 0.483675 0.808412 0.8363986 0.803275 0.8260989 0.642932 0.722940 0.2591818 0.660409 0.633606 0.5529130 0.654029 0.593420 0.61985 0.665522 0.7140873 1 0.7164105 0.7970174 -0.03718667 4 0.692922 0.70175 -0.00882839 0.899173 0.04171813 lowCoverage 1 1.00000 lowCoverage 0.82449117 0.462605 lowCoverage 1.00000 1 lowCoverage -0.0029319 0.9649243 insignificant 1 insignificant 0.7164105 0.5952733 0.14519188 7 0.692922 0.553931 0.13899184 3.2656e-06 7.8095e-01 weaklyHypermeth 6.1615e-05 1.0000e+00 weaklyHypermeth 8.8512e-05 9.9827e-01 weaklyHypermeth 3.5405e-03 1.00000000 weaklyHypermeth 0.2409727 5.3768e-02 insignificant 7.2660e-01 insignificant 0.7212456 0.688995 0.10030255 5 0.752487 0.691054 0.06143287 8.5872e-05 1.7234e-01 weaklyHypermeth 8.2817e-03 1.0000e+00 weaklyHypermeth 6.4203e-03 5.4107e-01 weaklyHypermeth 4.9387e-01 1.0000e+00 insignificant -0.01789080 7.1777e-01 insignificant 1.0000e+00 insignificant 0.7970174 0.5952733 0.1763116 4 0.701751 0.553931 0.1478202 1.8532e-04 9.9489e-01 lowCoverage 2.8957e-03 1.000000 lowCoverage 2.9697e-03 0.99988286 lowCoverage 5.6032e-02 1.00000 lowCoverage 0.2439045 5.2650e-02 insignificant 7.2123e-01 insignificant 0.8020219 0.688995 0.1526616 3 0.79532 0.691054 0.1042630 8.8985e-07 6.8565e-01 lowCoverage 8.0895e-05 1.0000e+00 lowCoverage 2.2192e-02 6.0848e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.01495895 7.7577e-01 insignificant 1.0000e+00 insignificant 0.600000 0.688995 -0.0520756 5 0.664451 0.691054 -0.0266029 3.9418e-01 2.1730e-02 weaklyHypometh 1.0000e+00 2.4693e-01 insignificant 9.9410e-01 1.6836e-02 weaklyHypometh 1.0000000 2.6724e-01 insignificant -0.2588635 0.04103352 weaklyHypometh 0.621720 insignificant chr8 145102450 145103450 32043 PLEC1 ENSG00000178209 0.951379 89 4 0.665661 247 7 0.625543 184 7 0.79530 167 5 0.3790766 114 6 0.4837988 238 6 0.6079379 163 7 0.576863 170 7 0.425592 169 7 0.7163235 174 7 0.588118 369 7 0.452413 54 5 0.3461310 110 6 0.73501 167 7 0.532999 165 7 0.3681818 73 5 0.4000000 9 0 0.607248 203 5 0.6172696 447 7 0.4715959 192 5 0.857991 136 7 0.656577 97 5 0.87367 145 7 0.5659533 190 7 0.69410 80 6 0.689078 209 6 0.797464 286 7 0.527663 124 7 0.737684 429 7 0.683267 317 7 0.759224 342 7 0.6459756 278 7 0.681032 262 7 0.893991 160 7 0.905625 121 4 0.584259 36 5 0.591211 205 7 0.5187885 443 7 0.473817 126 4 0.53445 151 7 0.280374 150 4 0.485670 110 4 0.729400 141 7 0.898951 0.5601230 0.622855 0.758443 0.523368 0.835209 0.5934638 0.789794 0.6348935 0.7147334 0.8341817 0.417913 0.4889693 0.69004 0.578255 0.485040 0.4114837 0.5493028 0.7624142 0.7663191 0.866497 0.49568094 0.861427 0.6211355 0.666342 0.715159 0.777823 0.645050 0.702895 0.6357136 0.595742 0.8117487 0.573267 0.771810 0.8183430 0.526582 0.694574 0.5203520 0.388051 0.403644 0.30232 0.438639 0.5906965 2 0.6903539 0.7166730 -0.02452254 7 0.427466 0.61534 -0.18787124 0.978864 0.00018195 weaklyHypometh 1 0.18195 insignificant 0.98266649 0.013379 weaklyHypometh 1.00000 1 insignificant -0.1400653 0.0052927 weaklyHypometh 1 insignificant 0.6918455 0.6446618 0.04788709 7 0.498593 0.486585 0.01200851 6.2495e-02 1.1318e-04 inconclusive 5.5306e-01 2.8296e-02 inconclusive 7.3877e-01 1.5944e-03 inconclusive 1.0000e+00 0.39858975 insignificant -0.1284960 1.3190e-01 insignificant 1.0000e+00 insignificant 0.6917358 0.415929 0.27539826 5 0.498711 0.482868 0.01584228 8.7561e-08 9.3610e-01 hypermethylated 1.7512e-05 1.0000e+00 hypermethylated 3.7825e-03 9.9018e-01 weaklyHypermeth 3.4386e-01 1.0000e+00 insignificant 0.06657898 4.3630e-01 insignificant 1.0000e+00 insignificant 0.7175485 0.6446618 0.0691125 7 0.661945 0.486585 0.1753598 2.7063e-01 1.5188e-01 insignificant 1.0000e+00 1.000000 insignificant 5.3490e-01 0.14925133 insignificant 1.0000e+00 1.00000 insignificant 0.0115694 8.8072e-01 insignificant 1.0000e+00 insignificant 0.7176560 0.415929 0.2698108 5 0.69012 0.482868 0.2072476 5.0345e-07 1.0000e+00 hypermethylated 5.0345e-05 1.0000e+00 hypermethylated 8.2259e-05 9.9995e-01 hypermethylated 1.3710e-02 1.0000e+00 hypermethylated 0.20664431 4.1237e-02 weaklyHypermeth 1.0000e+00 insignificant 0.644662 0.415066 0.1585234 5 0.486585 0.435856 0.0507285 1.3839e-04 1.0000e+00 weaklyHypermeth 2.7677e-02 1.0000e+00 weaklyHypermeth 3.6822e-03 1.0000e+00 weaklyHypermeth 0.9205613 1.0000e+00 insignificant 0.1950750 0.08057726 insignificant 0.947968 insignificant chr8 145103350 145104350 32044 PLEC1 ENSG00000178209 0.867971 257 8 0.779006 392 10 0.762029 215 10 0.86298 340 8 0.7318824 156 10 0.8393181 373 10 0.7105610 130 10 0.893887 326 10 0.733953 268 10 0.8204278 328 10 0.878863 373 10 0.593029 71 6 0.5557310 334 10 0.81264 243 10 0.710192 269 10 0.5303030 34 3 0.8229167 23 1 0.787546 317 8 0.8785049 490 10 0.8755772 223 8 0.743788 147 10 0.852854 171 8 0.86507 205 10 0.6356790 212 10 0.77146 139 10 0.855690 425 10 0.793718 261 10 0.654942 121 10 0.852804 494 10 0.895545 474 10 0.888577 464 10 0.8731141 278 10 0.894441 322 10 0.936349 212 10 0.992857 298 7 0.856667 51 7 0.872620 215 10 0.9088371 506 10 0.836209 155 8 0.75545 231 10 0.615944 189 8 0.796101 214 8 0.836796 234 10 0.867292 0.7515662 0.758136 0.886951 0.738543 0.915369 0.7279193 0.890586 0.7556488 0.8261532 0.8844254 0.620362 0.7864806 0.83452 0.783095 0.684613 0.6813294 0.8327983 0.8944473 0.9134339 0.902298 0.79421513 0.871794 0.7688182 0.791187 0.865967 0.876878 0.691764 0.861821 0.8897916 0.861696 0.8682925 0.887331 0.933204 0.9603570 0.853623 0.865722 0.8936580 0.806500 0.765228 0.70169 0.816816 0.8345694 7 0.8356908 0.8552050 -0.02582689 10 0.577127 0.63016 -0.05303228 0.989839 0.04794225 weaklyHypometh 1 1.00000 insignificant 0.98516461 0.322821 insignificant 1.00000 1 insignificant -0.0345701 0.3367698 insignificant 1 insignificant 0.8366634 0.9027431 -0.07975494 10 0.734525 0.919481 -0.18495565 9.9971e-01 2.4941e-08 weaklyHypometh 1.0000e+00 2.4941e-05 weaklyHypometh 9.9996e-01 5.0665e-07 weaklyHypometh 1.0000e+00 0.00050665 weaklyHypometh -0.1379290 3.0941e-04 weaklyHypometh 1.5470e-02 weaklyHypometh 0.8369882 0.830890 0.03529460 8 0.807978 0.787618 0.02035977 2.1237e-02 8.3468e-01 weaklyHypermeth 6.6365e-01 1.0000e+00 insignificant 1.4433e-01 8.4103e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00426718 9.3102e-01 insignificant 1.0000e+00 insignificant 0.8566785 0.9027431 -0.0499528 10 0.779294 0.919481 -0.1401873 9.9972e-01 6.4456e-05 weaklyHypometh 1.0000e+00 0.030045 weaklyHypometh 9.9995e-01 0.00011396 weaklyHypometh 1.0000e+00 0.11396 insignificant -0.1033589 5.9762e-03 weaklyHypometh 1.7141e-01 insignificant 0.8571851 0.830890 0.0510688 8 0.85722 0.787618 0.0696050 1.4796e-03 9.9457e-01 weaklyHypermeth 7.7873e-02 1.0000e+00 weaklyHypermeth 3.7343e-02 9.7759e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.03883726 4.4628e-01 insignificant 1.0000e+00 insignificant 0.902682 0.830890 0.1067524 8 0.911429 0.787618 0.1238110 6.6197e-09 9.9998e-01 weaklyHypermeth 3.3099e-06 1.0000e+00 weaklyHypermeth 5.7063e-06 9.9990e-01 weaklyHypermeth 0.0057063 1.0000e+00 weaklyHypermeth 0.1421962 0.02108347 weaklyHypermeth 0.439239 insignificant chr8 145194750 145195750 32047 OPLAH ENSG00000178814 0.827473 177 4 0.831623 251 6 0.474786 106 5 0.76763 209 4 0.5450617 95 4 0.9151964 322 5 0.5954637 149 4 0.840951 148 5 0.769180 100 5 0.7713675 54 4 0.620383 316 5 0.575893 32 3 0.9353269 85 5 0.68629 60 4 0.746673 62 5 0.8333333 43 3 0.9090909 17 2 0.542959 120 4 0.7883456 115 3 0.7691000 219 5 0.488507 47 5 0.983333 18 1 0.59669 129 4 0.7849512 109 5 0.57143 19 1 0.838526 233 4 0.566856 94 6 0.923077 39 4 0.871476 109 2 0.746263 263 5 0.899996 249 5 0.8320964 264 5 0.535491 158 5 0.500245 134 5 0.699210 181 5 0.500000 3 0 0.503340 203 7 0.6676701 272 5 0.778949 252 4 0.63135 285 4 0.624771 170 4 0.572663 96 4 0.517883 254 4 0.904083 0.8059361 0.824195 0.970424 0.896116 0.876670 0.7792402 0.896531 0.8642728 0.9665416 0.9099903 0.822300 0.9248382 0.91617 0.876635 0.732385 0.8528644 0.9113060 0.9428678 0.9202705 0.866166 0.97018970 0.914851 0.8216420 0.926504 0.874327 0.901037 0.791119 0.953282 0.8809524 0.912732 0.8852212 0.646686 0.411493 0.7927404 0.503945 0.774250 0.7069756 0.888579 0.955483 0.86061 0.906564 0.8989698 2 0.8817164 0.8862047 0.00066495 5 0.614249 0.53595 0.07830347 0.412254 0.86021092 insignificant 1 1.00000 insignificant 0.71945296 0.797693 insignificant 1.00000 1 insignificant -0.0212934 0.7083121 lowCoverage 1 lowCoverage 0.8836513 0.6235542 0.24575140 5 0.666626 0.428644 0.23798181 8.0949e-15 9.9999e-01 hypermethylated 4.4972e-13 1.0000e+00 hypermethylated 7.6670e-07 9.9966e-01 hypermethylated 4.2594e-05 1.00000000 hypermethylated 0.1696473 3.9414e-03 lowCoverage 1.0948e-01 lowCoverage 0.8817164 0.886471 -0.01010733 4 0.614249 0.551057 0.06319157 6.6281e-01 7.0880e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 5.2603e-01 7.4497e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.11218262 6.5909e-02 lowCoverage 1.0000e+00 lowCoverage 0.8884640 0.6235542 0.2448265 5 0.595495 0.428644 0.1668510 3.4273e-09 1.0000e+00 hypermethylated 1.4280e-07 1.000000 hypermethylated 2.0024e-04 0.99994365 hypermethylated 7.1516e-03 1.00000 hypermethylated 0.1909407 5.9993e-03 lowCoverage 1.7141e-01 lowCoverage 0.8862047 0.886471 -0.0117330 4 0.53595 0.551057 -0.0151119 9.8542e-01 6.4667e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.1343e-01 8.2332e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.13347601 5.8721e-02 lowCoverage 1.0000e+00 lowCoverage 0.623554 0.888994 -0.2760581 4 0.428644 0.612286 -0.1836420 9.9993e-01 5.9600e-05 lowCoverage 1.0000e+00 1.5282e-03 lowCoverage 9.9996e-01 1.2491e-03 lowCoverage 1.0000000 4.2207e-02 lowCoverage -0.0574647 0.34402708 lowCoverage 1.000000 lowCoverage chr8 145358950 145359950 32048 HEATR7A ENSG00000179832 0.688889 64 5 0.798171 129 5 0.709535 138 5 0.30286 58 4 0.7966667 50 3 0.7370907 171 5 0.7982540 93 5 0.695146 84 5 0.707143 95 5 0.7852308 82 5 0.762373 108 5 0.851446 96 4 0.7979699 128 5 NA 0 0 0.872308 92 3 0.7304762 92 5 0.6690476 66 4 0.523095 53 5 0.7520499 107 3 0.7847549 128 5 0.785281 41 5 0.636508 26 3 0.72529 92 5 0.9433333 45 4 0.25000 10 0 0.724488 104 5 0.803068 70 5 0.966667 39 3 0.687899 63 5 0.738824 113 5 0.774392 89 5 0.7663203 160 5 0.767695 117 5 0.795188 83 5 0.787879 111 5 0.550000 20 2 0.785714 75 5 0.6937641 138 5 0.624167 61 5 0.82571 81 5 0.660000 19 3 0.697727 44 5 0.667929 57 5 0.712644 0.8466188 0.766786 0.247044 0.848420 0.728798 0.8379105 0.740626 0.7188013 0.8435809 0.7878892 0.864457 0.8430791 NA 0.915451 0.758908 0.7406609 0.5575226 0.8417158 0.7706899 0.757215 0.58819102 0.762699 0.9487069 0.310173 0.782624 0.821518 0.949713 0.743091 0.7927847 0.816653 0.7806725 0.789763 0.812196 0.8147858 0.621408 0.817365 0.7159402 0.644073 0.836579 0.64224 0.630192 0.6144963 2 0.7857143 0.7875587 -0.01161597 5 0.750636 0.76539 -0.01475694 0.858864 0.17122712 insignificant 1 1.00000 insignificant 0.80120623 0.341286 insignificant 1.00000 1 insignificant -0.0091634 0.8793108 lowCoverage 1 lowCoverage 0.7857143 0.7757353 0.00745220 5 0.750636 0.749992 0.00064446 6.5668e-01 4.8465e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.1974e-01 7.0488e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0056977 9.0919e-01 lowCoverage 1.0000e+00 lowCoverage 0.7857143 0.687023 0.07934361 5 0.750636 0.703221 0.04741531 4.6781e-02 6.2920e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 8.3955e-02 3.5159e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02923574 5.3332e-01 lowCoverage 1.0000e+00 lowCoverage 0.7875587 0.7757353 0.0169210 5 0.765393 0.749992 0.0154014 4.5582e-01 8.5833e-01 insignificant 1.0000e+00 1.000000 insignificant 4.1050e-01 0.74963871 insignificant 1.0000e+00 1.00000 insignificant 0.0034657 9.5807e-01 lowCoverage 1.0000e+00 lowCoverage 0.7875587 0.687023 0.0907266 5 0.76539 0.703221 0.0621723 2.5713e-02 9.1119e-01 weaklyHypermeth 8.2945e-01 1.0000e+00 insignificant 1.6362e-01 7.9572e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03839911 5.4722e-01 lowCoverage 1.0000e+00 lowCoverage 0.775735 0.687023 0.0754558 5 0.749992 0.703221 0.0467708 6.5800e-02 7.9098e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9681e-02 4.2842e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.0349335 0.52063163 lowCoverage 1.000000 lowCoverage chr8 145644850 145645850 32050 NFKBIL2 ENSG00000160949 0.801911 234 9 0.763281 175 6 0.806057 168 9 0.87865 220 7 0.8541777 102 9 0.9150167 239 9 0.9415205 233 9 0.782451 146 9 0.843600 225 9 0.8731600 238 9 0.886472 245 9 0.779051 173 9 0.9370241 250 9 0.83165 152 7 0.913224 215 9 0.8827553 144 6 0.8223906 99 4 0.827350 249 9 0.8852772 212 9 0.8811147 217 9 0.806781 86 6 0.687238 99 8 0.90596 188 9 0.9231822 94 6 0.94226 119 7 0.889361 171 9 0.872071 204 9 0.773169 158 9 0.896238 126 9 0.915859 195 9 0.847306 145 9 0.9007202 291 9 0.797598 181 9 0.769645 125 9 0.777778 134 9 0.922222 32 4 0.882067 156 9 0.7941138 152 9 0.878455 182 9 0.86584 217 9 0.780836 170 7 0.818260 218 9 0.828260 203 7 0.737512 0.7545762 0.749444 0.845581 0.821712 0.888597 0.9157764 0.739948 0.8183421 0.8867230 0.8745311 0.777145 0.9161308 0.84455 0.908485 0.860342 0.8306443 0.8114461 0.8607048 0.8604785 0.772529 0.68203758 0.880310 0.8793314 0.921505 0.854149 0.839158 0.810306 0.832719 0.9053685 0.808907 0.9005072 0.776549 0.780061 0.5594059 0.907723 0.825946 0.8364200 0.888470 0.800491 0.74523 0.788072 0.7430036 4 0.8561992 0.8614072 -0.01222832 9 0.863942 0.87393 -0.00998965 0.775092 0.11609972 insignificant 1 1.00000 insignificant 0.98322016 0.019589 weaklyHypometh 1.00000 1 insignificant -0.0080384 0.7455291 insignificant 1 insignificant 0.8561992 0.8230769 0.03549657 9 0.863942 0.821200 0.04274187 6.1955e-03 2.2251e-01 weaklyHypermeth 6.5910e-02 1.0000e+00 weaklyHypermeth 9.5680e-01 2.6773e-02 inconclusive 1.0000e+00 1.00000000 insignificant 0.0314031 3.0100e-01 insignificant 1.0000e+00 insignificant 0.8561992 0.801010 0.04914318 9 0.863942 0.830737 0.03320459 2.3487e-03 8.6919e-01 weaklyHypermeth 1.4679e-01 1.0000e+00 insignificant 7.8821e-02 7.1503e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02097707 3.4789e-01 insignificant 1.0000e+00 insignificant 0.8614072 0.8230769 0.0539387 9 0.873931 0.821200 0.0527315 1.5285e-02 6.0256e-01 weaklyHypermeth 1.6090e-01 1.000000 insignificant 7.8183e-01 0.31752856 insignificant 1.0000e+00 1.00000 insignificant 0.0394415 2.6040e-01 insignificant 1.0000e+00 insignificant 0.8614072 0.801010 0.0611488 9 0.87393 0.830737 0.0431942 3.5892e-02 9.9139e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 8.7432e-02 9.8650e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02901546 3.1103e-01 insignificant 1.0000e+00 insignificant 0.823077 0.801010 0.0259001 9 0.821200 0.830737 -0.0095373 8.8850e-02 5.8534e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.1629e-02 9.7694e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.0104261 0.74489598 insignificant 1.000000 insignificant chr8 145889050 145890050 32052 ENSG00000147799 0.725777 358 13 0.619231 446 15 0.720319 181 14 0.68245 328 13 0.6681228 255 14 0.6874881 493 15 0.5890777 274 10 0.708057 314 14 0.752108 225 14 0.6919773 230 15 0.626711 587 14 0.679377 156 13 0.7488449 342 14 0.78302 150 12 0.738465 312 12 0.6536376 141 9 0.7126444 1283 11 0.628559 382 12 0.6612861 221 14 0.6792253 358 15 0.625926 113 11 0.776248 152 11 0.65121 240 11 0.7373918 132 14 0.74370 184 10 0.716022 350 15 0.797189 235 14 0.717622 100 10 0.589333 240 14 0.723228 364 15 0.636989 335 16 0.6721133 522 15 0.663419 354 14 0.738518 276 14 0.637255 361 13 0.724157 76 4 0.523316 270 14 0.6877764 354 14 0.709494 386 16 0.65204 395 15 0.655731 350 15 0.615407 255 10 0.615315 349 16 0.752500 0.7001991 0.730084 0.797407 0.739458 0.769149 0.7100844 0.812599 0.7271607 0.7607800 0.7581081 0.724770 0.7689274 0.81586 0.763808 0.743280 0.7758190 0.7858535 0.7901997 0.7669291 0.728977 0.79096384 0.708617 0.7842830 0.815185 0.794814 0.842595 0.771457 0.741879 0.7558364 0.764267 0.7580561 0.727136 0.714896 0.7275203 0.805171 0.641606 0.6876324 0.788549 0.789202 0.74041 0.762404 0.7888318 9 0.7403668 0.7508429 -0.01684341 14 0.658821 0.69652 -0.03769546 0.955633 0.02860999 weaklyHypometh 1 1.00000 insignificant 0.95896106 0.155540 insignificant 1.00000 1 insignificant -0.0110955 0.6114036 insignificant 1 insignificant 0.7404407 0.6989947 0.03994021 14 0.678891 0.669534 0.00935706 2.0233e-03 8.7104e-01 weaklyHypermeth 2.2743e-02 1.0000e+00 weaklyHypermeth 1.3552e-02 9.9817e-01 weaklyHypermeth 1.8314e-01 1.00000000 insignificant 0.0254118 4.7738e-01 insignificant 1.0000e+00 insignificant 0.7403668 0.765418 -0.01772831 13 0.658821 0.656614 0.00220757 9.0719e-01 2.5901e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.4619e-01 6.4500e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03822079 1.0142e-01 insignificant 1.0000e+00 insignificant 0.7508429 0.6988166 0.0566948 14 0.696517 0.648879 0.0476373 2.9923e-05 9.6008e-01 weaklyHypermeth 5.5413e-04 1.000000 weaklyHypermeth 1.4878e-03 0.99413553 weaklyHypermeth 3.4599e-02 1.00000 weaklyHypermeth 0.0365074 3.4707e-01 insignificant 1.0000e+00 insignificant 0.7508429 0.765418 0.0020959 14 0.69652 0.656614 0.0399030 2.5638e-01 7.4044e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.3689e-01 9.1337e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.04931633 7.3471e-02 insignificant 1.0000e+00 insignificant 0.698817 0.765418 -0.0571452 13 0.648879 0.656614 -0.0077343 7.8776e-01 1.2029e-02 weaklyHypometh 1.0000e+00 1.5037e-01 insignificant 9.0868e-01 4.5616e-02 weaklyHypometh 1.0000000 5.3666e-01 insignificant 0.0128090 0.73271735 insignificant 1.000000 insignificant chr9 233950 234950 32062 C9orf66 ENSG00000183784 0.695233 277 8 0.705362 90 5 0.596416 137 8 0.78827 132 8 0.7760417 89 8 0.5355286 227 8 0.6884921 101 8 0.615232 101 8 0.647338 112 8 0.7727165 102 8 0.673538 270 8 0.684466 114 7 0.7398701 88 7 0.75000 24 2 0.572223 145 8 0.6750104 118 7 0.7460317 65 7 0.768135 141 8 0.7283289 228 8 0.6478266 250 8 0.749321 61 5 0.687278 76 6 0.61246 142 8 0.6599473 100 6 0.61667 52 6 0.717623 164 8 0.592746 100 5 0.631791 61 5 0.617262 84 4 0.591699 193 8 0.732153 112 4 0.7365230 221 8 0.625961 101 4 0.616283 111 8 0.718426 100 4 0.706710 68 7 0.503911 84 6 0.5106253 173 8 0.676600 209 8 0.74670 258 8 0.772357 174 8 0.743388 169 8 0.788458 191 8 0.764284 0.7252808 0.721738 0.808222 0.854823 0.716114 0.7701850 0.734086 0.7129185 0.8253067 0.7374722 0.665457 0.7524677 0.75566 0.658184 0.760970 0.8035207 0.8318931 0.7888403 0.7542554 0.843733 0.71655444 0.768082 0.7724880 0.778740 0.759409 0.726079 0.723268 0.708183 0.7464966 0.803834 0.7295317 0.681077 0.658193 0.6279765 0.683897 0.599192 0.6361060 0.744140 0.795937 0.83292 0.803273 0.8391035 4 0.7175382 0.7371889 -0.00134629 8 0.706342 0.65111 0.05523371 0.655603 0.86041304 insignificant 1 1.00000 insignificant 0.75582897 0.685508 insignificant 1.00000 1 insignificant 0.0281808 0.2405404 insignificant 1 insignificant 0.7175382 0.6342229 0.10588533 8 0.706342 0.707295 -0.00095235 5.7942e-06 9.9880e-01 weaklyHypermeth 1.0730e-04 1.0000e+00 weaklyHypermeth 1.6208e-03 9.9988e-01 weaklyHypermeth 3.1780e-02 1.00000000 weaklyHypermeth 0.0766503 1.0343e-01 insignificant 1.0000e+00 insignificant 0.7175464 0.769231 -0.05591394 8 0.679554 0.743878 -0.06432420 9.9761e-01 5.4452e-04 weaklyHypometh 1.0000e+00 1.0890e-01 insignificant 9.9624e-01 1.8800e-03 weaklyHypometh 1.0000e+00 3.2329e-01 insignificant -0.05519792 5.0085e-02 insignificant 1.0000e+00 insignificant 0.7371889 0.6342229 0.1081216 8 0.651109 0.707295 -0.0561861 4.0167e-05 9.5377e-01 weaklyHypermeth 6.9254e-04 1.000000 weaklyHypermeth 1.8132e-03 0.98961187 weaklyHypermeth 3.9418e-02 1.00000 weaklyHypermeth 0.0484695 2.7872e-01 insignificant 1.0000e+00 insignificant 0.7385524 0.769231 -0.0467454 8 0.67652 0.743878 -0.0673539 9.9852e-01 1.2688e-02 weaklyHypometh 1.0000e+00 9.0629e-01 insignificant 9.9293e-01 7.0955e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.08337875 8.2516e-03 weaklyHypometh 4.7909e-01 insignificant 0.632492 0.769231 -0.1542744 8 0.597530 0.743878 -0.1463481 9.9991e-01 4.3761e-09 weaklyHypometh 1.0000e+00 2.7351e-07 weaklyHypometh 9.9985e-01 2.8505e-06 weaklyHypometh 1.0000000 3.5631e-04 weaklyHypometh -0.1318482 0.01584417 weaklyHypometh 0.405151 insignificant chr9 686150 687150 32075 ENSG00000220409 0.803952 194 5 0.826068 54 3 0.689744 59 5 0.84367 94 5 0.7916667 40 5 0.7728470 152 5 0.7148872 76 5 0.811888 42 4 0.795378 56 4 0.9251515 41 4 0.780950 88 5 0.666667 46 5 0.6393939 84 5 NA 0 0 0.832479 61 5 0.8761905 27 3 0.5500000 30 3 0.803846 87 5 0.6755291 99 5 0.8243431 140 5 0.435714 26 3 0.872727 47 5 0.82115 102 5 0.9055556 28 3 0.79524 32 5 0.731238 89 5 0.938462 44 3 0.791667 12 0 0.800687 51 3 0.783791 96 5 0.638736 134 5 0.7722306 172 5 0.790168 68 5 0.636190 73 5 0.763399 88 5 0.787500 55 5 0.645714 46 3 0.6280538 84 5 0.904835 154 5 0.83409 140 5 0.775741 109 5 0.873135 132 5 0.789667 125 5 0.800723 0.8018856 0.700445 0.875191 0.788910 0.736942 0.7536590 0.723910 0.7959245 0.9417071 0.7744074 0.584895 0.7412676 NA 0.877341 0.900036 0.5763359 0.8125367 0.7161739 0.7910423 0.537623 0.81124219 0.838318 0.8634436 0.740640 0.754465 0.913095 0.741782 0.822100 0.7771475 0.736987 0.7822227 0.786837 0.607924 0.7400959 0.702449 0.732824 0.7094969 0.896908 0.844892 0.81082 0.897573 0.8146819 3 0.7748299 0.7803121 -0.00533328 5 0.773420 0.77639 -0.00297099 0.635018 0.51402693 insignificant 1 1.00000 insignificant 0.78691493 0.519519 insignificant 1.00000 1 insignificant -0.0042147 0.9240283 lowCoverage 1 lowCoverage 0.7748299 0.7318841 0.04170595 5 0.773420 0.742247 0.03117312 8.7200e-02 9.1991e-01 insignificant 7.2667e-01 1.0000e+00 insignificant 5.4626e-02 9.7229e-01 insignificant 5.6827e-01 1.00000000 insignificant 0.0612140 1.4546e-01 lowCoverage 1.0000e+00 lowCoverage 0.7748299 0.836364 -0.06859335 5 0.773420 0.837901 -0.06448068 9.9472e-01 8.9085e-03 weaklyHypometh 1.0000e+00 6.3632e-01 insignificant 9.9388e-01 4.6007e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.06577427 6.6094e-02 lowCoverage 1.0000e+00 lowCoverage 0.7803121 0.7318841 0.0486176 5 0.776391 0.742247 0.0341441 3.2525e-02 8.4878e-01 weaklyHypermeth 3.1274e-01 1.000000 insignificant 4.4563e-02 0.98800739 weaklyHypermeth 4.8439e-01 1.00000 insignificant 0.0654287 2.1101e-01 lowCoverage 1.0000e+00 lowCoverage 0.7803121 0.836364 -0.0690783 5 0.77639 0.837901 -0.0615097 9.9344e-01 1.6160e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.8286e-01 3.9840e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.06155958 1.9439e-01 lowCoverage 1.0000e+00 lowCoverage 0.731884 0.836364 -0.1178294 5 0.742247 0.837901 -0.0956538 9.9015e-01 2.8811e-04 weaklyHypometh 1.0000e+00 5.8797e-03 weaklyHypometh 9.9813e-01 2.4127e-03 weaklyHypometh 1.0000000 6.8934e-02 weaklyHypometh -0.1269883 0.01255761 lowCoverage 0.358789 lowCoverage chr9 800550 801550 32079 KANK1 ENSG00000107104 0.749785 178 4 0.811647 132 5 0.862245 66 5 0.93238 216 6 0.9388889 42 5 0.7806434 214 6 0.7638889 56 4 0.930159 62 6 0.660952 29 2 0.9731481 45 2 0.858346 217 6 0.893557 25 2 0.9238095 41 2 0.61667 10 1 0.688889 34 2 0.8412698 18 1 0.6363636 17 2 0.847820 104 3 0.9078947 66 3 0.7190678 183 5 0.746212 24 1 1.000000 11 1 0.93964 45 2 0.9183536 52 3 0.84261 32 2 0.901856 139 6 0.778968 39 4 0.737179 24 2 0.831481 37 2 0.937899 131 6 0.867906 124 5 0.8909076 202 6 0.702968 96 6 0.648810 48 4 0.522151 140 5 0.611111 39 2 0.595949 107 6 0.8337538 113 6 0.800754 210 4 0.75894 249 5 0.900291 242 4 0.909524 49 2 0.917500 220 5 0.724242 0.8446970 0.804545 0.913059 0.894949 0.873664 0.8800505 0.867965 0.8660895 0.9028620 0.8345583 0.839954 0.9350649 0.69559 0.821549 0.829147 0.8484848 0.9037737 0.9391946 0.8754797 0.753788 1.00000000 0.873190 0.9122807 0.901341 0.850202 0.788300 0.898019 0.871044 0.9558653 0.860017 0.9116550 0.650147 0.916667 0.7352941 0.799440 0.899143 0.9223528 0.801948 0.843368 0.90780 0.912067 0.8809524 1 0.8683761 0.8895349 -0.02204453 5 0.787644 0.76397 0.02367739 0.900693 0.15402776 insignificant 1 1.00000 insignificant 0.96273107 0.096378 insignificant 1.00000 1 insignificant -0.0492128 0.1588046 lowCoverage 1 lowCoverage 0.8683761 0.6703499 0.17590561 5 0.787644 0.552068 0.23557587 4.0132e-11 9.9997e-01 weaklyHypermeth 2.0066e-09 1.0000e+00 weaklyHypermeth 1.2383e-04 9.9628e-01 weaklyHypermeth 4.2700e-03 1.00000000 weaklyHypermeth 0.1644142 1.0414e-02 lowCoverage 2.3143e-01 lowCoverage 0.8692922 0.893814 -0.01365853 4 0.863363 0.847258 0.01610472 6.2739e-01 4.8579e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 4.3018e-01 5.2802e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.04053100 3.4432e-01 lowCoverage 1.0000e+00 lowCoverage 0.8895349 0.6703499 0.1958769 5 0.763967 0.552068 0.2118985 4.1039e-10 1.0000e+00 weaklyHypermeth 1.8654e-08 1.000000 weaklyHypermeth 9.8658e-04 0.99990061 weaklyHypermeth 2.6664e-02 1.00000 weaklyHypermeth 0.2136270 2.5915e-03 lowCoverage 9.2553e-02 lowCoverage 0.8916084 0.893814 0.0180380 4 0.89129 0.847258 0.0440366 2.2515e-01 9.4710e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 2.1865e-02 9.8923e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.00868183 8.3382e-01 lowCoverage 1.0000e+00 lowCoverage 0.671587 0.893814 -0.1961729 4 0.644080 0.847258 -0.2031782 9.9948e-01 2.0380e-05 lowCoverage 1.0000e+00 5.9940e-04 lowCoverage 9.7782e-01 4.5435e-03 lowCoverage 1.0000000 1.0566e-01 lowCoverage -0.2049452 0.00471446 lowCoverage 0.157149 lowCoverage chr9 13997350 13998350 32250 ENSG00000220087 0.745480 285 8 0.719204 103 7 0.617384 114 8 0.83047 209 8 0.7938173 73 8 0.8669922 254 6 0.8974868 88 6 0.756331 99 7 0.757823 54 5 0.8523810 61 5 0.859247 132 8 0.863636 33 3 0.7445328 110 7 0.89772 62 4 0.832967 87 7 0.3958333 42 3 0.5454545 36 1 0.664806 275 8 0.8353175 74 5 0.9043199 132 5 0.806746 62 6 0.846540 84 7 0.79203 111 3 0.5822751 45 6 0.76111 120 7 0.696806 111 5 0.612158 93 7 0.817555 77 7 0.786767 114 8 0.806969 110 6 0.586259 120 7 0.8208156 225 8 0.807281 160 8 0.562588 159 7 0.764286 73 7 0.385800 76 2 0.535916 94 6 0.7611867 144 8 0.847764 269 8 0.82235 228 5 0.853564 247 7 0.865238 162 6 0.868595 237 8 0.800169 0.7434378 0.598879 0.822574 0.744780 0.888107 0.8365309 0.711378 0.6652630 0.7836285 0.8327562 0.761082 0.7178913 0.82392 0.740011 0.341598 0.6139268 0.7407242 0.7865670 0.8753308 0.797226 0.86163848 0.759421 0.7069264 0.805340 0.702394 0.702732 0.683544 0.790142 0.8411138 0.639840 0.8983972 0.776303 0.672165 0.7949380 0.502382 0.623539 0.7576108 0.818062 0.830933 0.80771 0.791962 0.8317172 2 0.7877744 0.8078740 -0.00670458 7 0.735431 0.73733 -0.00189893 0.647345 0.78216690 insignificant 1 1.00000 insignificant 0.27175672 0.702983 insignificant 1.00000 1 insignificant 0.0260578 0.5262098 insignificant 1 insignificant 0.7877744 0.7219858 0.05362129 7 0.735431 0.570105 0.16532595 4.9356e-04 9.8635e-01 weaklyHypermeth 6.7612e-03 1.0000e+00 weaklyHypermeth 1.0319e-03 8.4552e-01 weaklyHypermeth 2.2433e-02 1.00000000 weaklyHypermeth 0.1328841 1.1671e-01 insignificant 1.0000e+00 insignificant 0.7904968 0.835521 -0.03416546 7 0.817145 0.853210 -0.03606517 9.7767e-01 2.6046e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.5551e-01 2.1154e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.08244212 1.2828e-02 weaklyHypometh 6.5285e-01 insignificant 0.8066038 0.7209632 0.0653347 8 0.670300 0.518277 0.1520226 3.3724e-02 9.9254e-01 weaklyHypermeth 3.2118e-01 1.000000 insignificant 2.3118e-02 0.96896371 weaklyHypermeth 2.8193e-01 1.00000 insignificant 0.1068263 1.9234e-01 insignificant 1.0000e+00 insignificant 0.8104265 0.835521 -0.0283010 8 0.81926 0.853210 -0.0339553 9.9240e-01 2.3721e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8013e-01 1.3395e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.10849988 2.7880e-03 weaklyHypometh 2.3234e-01 insignificant 0.723011 0.835521 -0.0921645 8 0.633450 0.853210 -0.2197607 9.5738e-01 8.2225e-05 weaklyHypometh 1.0000e+00 1.9702e-03 weaklyHypometh 9.7605e-01 1.5967e-03 weaklyHypometh 1.0000000 5.1403e-02 weaklyHypometh -0.2153262 0.02482101 weaklyHypometh 0.486686 insignificant chr9 15319150 15320150 32290 TTC39B ENSG00000155158 0.802817 322 9 0.723416 200 9 0.692089 157 9 0.79072 165 9 0.7714754 91 9 0.7319436 357 9 0.7394307 193 9 0.766820 136 9 0.772456 108 9 0.6747054 127 9 0.718177 216 9 0.790448 86 5 0.7860540 174 9 0.83333 24 4 0.807304 162 9 0.6964862 75 9 0.8382173 100 5 0.780678 180 9 0.8049383 105 9 0.6818753 344 9 0.734568 60 9 0.694781 77 9 0.78911 154 9 0.8314815 75 9 0.81353 60 7 0.773431 205 9 0.710979 77 6 0.745230 57 5 0.736908 105 9 0.769419 185 9 0.727409 215 9 0.7640220 474 9 0.671726 150 9 0.679387 131 9 0.682524 119 7 0.794915 65 5 0.683043 93 8 0.7348999 178 9 0.776929 244 9 0.76054 228 9 0.770757 207 9 0.787085 274 9 0.756758 230 9 0.809218 0.7185534 0.674832 0.789428 0.789821 0.732993 0.7597351 0.755814 0.7654673 0.6996350 0.7134638 0.783877 0.7593626 0.78088 0.778771 0.703906 0.8081108 0.7920121 0.8101545 0.7002480 0.727704 0.69602864 0.774613 0.8280905 0.799217 0.751874 0.698183 0.733460 0.708257 0.7483228 0.707581 0.7793056 0.636882 0.677595 0.6622595 0.766823 0.681288 0.6917656 0.774173 0.773317 0.77328 0.796441 0.7496961 5 0.7682119 0.7643349 -0.00948377 9 0.750501 0.76420 -0.01370292 0.814175 0.23172605 insignificant 1 1.00000 insignificant 0.53965694 0.635049 insignificant 1.00000 1 insignificant 0.0025964 0.8737006 insignificant 1 insignificant 0.7682119 0.6875000 0.06059605 9 0.750501 0.698242 0.05225859 1.1361e-04 9.5451e-01 weaklyHypermeth 1.7752e-03 1.0000e+00 weaklyHypermeth 4.1535e-03 9.2655e-01 weaklyHypermeth 6.6992e-02 1.00000000 weaklyHypermeth 0.0524200 4.7738e-02 weaklyHypermeth 6.9186e-01 insignificant 0.7682119 0.819104 -0.02246936 9 0.750501 0.771957 -0.02145623 9.5842e-01 5.6368e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 6.9035e-01 2.8614e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01024471 4.1829e-01 insignificant 1.0000e+00 insignificant 0.7643349 0.6875000 0.0704260 9 0.764204 0.698242 0.0659615 4.9032e-04 9.6710e-01 weaklyHypermeth 7.2106e-03 1.000000 weaklyHypermeth 2.8587e-02 0.99154373 weaklyHypermeth 3.3632e-01 1.00000 insignificant 0.0498236 5.9227e-02 insignificant 7.5902e-01 insignificant 0.7643349 0.819104 -0.0133229 9 0.76420 0.771957 -0.0077533 7.5344e-01 1.1601e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.2264e-01 1.6688e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01284115 3.3779e-01 insignificant 1.0000e+00 insignificant 0.687500 0.819104 -0.0839041 9 0.698242 0.771957 -0.0737148 9.8446e-01 1.6591e-04 weaklyHypometh 1.0000e+00 3.6068e-03 weaklyHypometh 9.6832e-01 4.4414e-03 weaklyHypometh 1.0000000 1.0566e-01 insignificant -0.0626648 0.02343038 weaklyHypometh 0.468608 insignificant chr9 16182150 16183150 32313 ENSG00000207360 0.130370 253 5 0.105205 158 5 0.107296 162 5 0.20220 75 5 0.2031729 73 5 0.1636971 162 5 0.1480299 238 5 0.296041 169 5 0.080116 245 5 0.1091300 165 5 0.215223 161 5 0.145852 151 5 0.0442367 220 5 NA 0 0 0.149240 150 5 0.1515422 107 5 0.0527491 239 5 0.090498 110 5 0.1438095 100 5 0.0849934 242 5 0.474423 53 5 0.014286 69 5 0.25638 204 5 0.1903006 75 5 0.25000 21 2 0.114280 223 5 0.144780 77 5 0.184545 32 3 0.056830 135 5 0.155297 263 5 0.090753 222 5 0.2579529 264 5 0.051365 196 5 0.021691 138 5 0.000000 76 5 0.025000 79 5 0.040385 49 5 0.0153922 234 5 0.041739 283 5 0.06345 221 5 0.060554 135 5 0.039639 206 5 0.081439 152 5 0.155538 0.1037636 0.104965 0.212791 0.195205 0.185417 0.1401318 0.248920 0.0738361 0.1168954 0.2311912 0.144857 0.0476203 NA 0.132889 0.165508 0.0438821 0.0887059 0.1260935 0.0869597 0.417942 0.01628571 0.262140 0.1957367 0.197000 0.120517 0.141214 0.186545 0.056143 0.1466307 0.097583 0.2589218 0.047994 0.020370 0.0000000 0.028500 0.054038 0.0217920 0.057983 0.079545 0.06328 0.050200 0.0907333 5 0.1204403 0.1617827 -0.03924407 5 0.125515 0.16946 -0.04394482 0.997237 0.02840401 weaklyHypometh 1 1.00000 insignificant 0.91305655 0.271282 insignificant 1.00000 1 insignificant -0.0444118 0.2562256 lowCoverage 1 lowCoverage 0.1204403 0.0284974 0.09192170 5 0.125515 0.024023 0.10149197 1.8681e-07 1.0000e+00 weaklyHypermeth 4.0612e-06 1.0000e+00 weaklyHypermeth 5.1595e-09 1.0000e+00 weaklyHypermeth 5.1595e-07 1.00000000 weaklyHypermeth 0.1124350 3.4208e-07 lowCoverage 3.4208e-05 lowCoverage 0.1204403 0.083250 0.03927981 5 0.125515 0.054597 0.07091773 1.2511e-04 7.9600e-01 weaklyHypermeth 1.0426e-02 1.0000e+00 weaklyHypermeth 8.0506e-06 8.1614e-01 weaklyHypermeth 2.6835e-03 1.0000e+00 weaklyHypermeth 0.08070949 5.1426e-05 lowCoverage 8.5709e-03 lowCoverage 0.1617827 0.0284974 0.1299056 5 0.169459 0.024023 0.1454368 2.9624e-07 1.0000e+00 weaklyHypermeth 8.2290e-06 1.000000 weaklyHypermeth 2.9060e-06 0.99999992 weaklyHypermeth 1.9373e-04 1.00000 weaklyHypermeth 0.1568468 8.6815e-04 lowCoverage 4.3407e-02 lowCoverage 0.1617827 0.083250 0.0873134 5 0.16946 0.054597 0.1148626 3.0367e-04 9.6861e-01 weaklyHypermeth 1.8979e-02 1.0000e+00 weaklyHypermeth 4.2095e-04 9.1744e-01 weaklyHypermeth 4.6773e-02 1.0000e+00 weaklyHypermeth 0.12512133 4.3245e-03 lowCoverage 3.3007e-01 lowCoverage 0.028497 0.083250 -0.0547734 5 0.024023 0.054597 -0.0305742 8.4339e-01 3.2235e-04 weaklyHypometh 1.0000e+00 6.4470e-03 weaklyHypometh 9.5563e-01 6.6492e-03 weaklyHypometh 1.0000000 1.3570e-01 insignificant -0.0317255 0.01620602 weaklyHypometh 0.405151 insignificant chr9 16662050 16663050 32332 C9orf92 ENSG00000205549 0.821451 117 6 0.584370 119 6 0.550000 47 6 0.70687 102 6 0.5183056 79 6 0.6707459 61 5 0.4386574 52 3 0.692745 66 5 0.880952 23 1 0.7164683 43 6 0.694228 148 6 0.819444 31 1 0.7298475 97 6 0.62500 48 6 0.735560 70 6 0.8660714 26 3 0.6500000 20 1 0.637190 105 3 0.8205128 43 3 0.5407407 34 5 0.944444 18 0 0.933333 9 0 0.67298 77 6 0.4930556 26 3 0.79710 56 2 0.677651 94 4 0.819444 24 2 0.694444 9 0 0.753323 75 6 0.838082 104 5 0.753247 126 5 0.6238095 67 5 0.660293 110 6 0.527473 72 5 0.593750 52 3 0.583333 11 0 0.497549 52 3 0.7067932 64 5 0.685786 83 6 0.87158 104 6 0.760462 83 6 0.737765 87 6 0.660903 93 6 0.844482 0.5751321 0.628302 0.772244 0.646199 0.720478 0.5478249 0.805185 0.9150943 0.7713612 0.7346239 0.797170 0.7991121 0.70283 0.841251 0.853437 NA 0.7382912 0.7773585 0.6125786 0.905660 0.87232315 0.745712 0.5495283 0.825267 0.743267 0.761006 0.640624 0.772923 0.8617159 0.785592 0.6358491 0.714244 0.638762 0.7028061 0.707523 0.695708 0.6987070 0.751899 0.873458 0.78445 0.822140 0.7305216 0 0.7082707 0.7459854 -0.03563783 5 0.625662 0.77704 -0.15137830 0.999235 0.51668462 insignificant 1 1.00000 insignificant 0.98360142 0.240064 insignificant 1.00000 1 insignificant -0.0651182 0.1704333 lowCoverage 1 lowCoverage 0.7076112 0.6565097 0.05202520 6 0.550794 0.526570 0.02422374 1.6865e-01 9.9888e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.5969e-01 9.9937e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0900928 5.1478e-02 lowCoverage 7.0518e-01 lowCoverage 0.7087452 0.802222 -0.05886840 6 0.661849 0.778154 -0.11630482 9.4840e-01 3.3896e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 8.3200e-01 6.7312e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.05834022 2.3229e-01 lowCoverage 1.0000e+00 lowCoverage 0.7452416 0.6565097 0.0859611 5 0.732448 0.526570 0.2058777 3.5687e-02 1.0000e+00 weaklyHypermeth 3.3667e-01 1.000000 insignificant 5.1363e-02 0.99322362 insignificant 5.3503e-01 1.00000 insignificant 0.1552111 6.4530e-03 lowCoverage 1.7925e-01 lowCoverage 0.7422222 0.802222 -0.0128074 5 0.61778 0.778154 -0.1603706 6.9144e-01 4.1903e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.9556e-01 3.7115e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00677802 8.9888e-01 lowCoverage 1.0000e+00 lowCoverage 0.661064 0.802222 -0.0984955 6 0.680815 0.778154 -0.0973387 9.9863e-01 9.1813e-04 weaklyHypometh 1.0000e+00 1.5830e-02 weaklyHypometh 9.6373e-01 1.3655e-02 weaklyHypometh 1.0000000 2.2025e-01 insignificant -0.1484331 0.01485287 lowCoverage 0.390865 lowCoverage chr9 18878750 18879750 32413 ENSG00000223211 0.899875 474 7 0.915296 92 7 0.829969 195 7 0.91604 455 7 0.8695548 142 7 0.9200669 396 7 0.8662352 212 7 0.922161 115 7 0.896387 384 7 0.9464072 283 7 0.877257 189 7 0.880010 268 7 0.9327660 219 7 0.94297 159 7 0.909929 249 7 0.8250080 298 7 0.8844489 106 7 0.898790 479 7 0.9210868 120 7 0.9192247 321 7 0.784776 53 6 0.886600 175 7 0.93619 197 7 0.9216450 76 7 0.96310 67 7 0.918379 181 7 0.755213 145 7 0.977004 162 7 0.894257 183 7 0.926898 201 7 0.943561 98 7 0.9154130 310 7 0.897452 105 7 0.931540 114 7 1.000000 244 7 0.896825 56 7 0.829998 228 7 0.8452824 161 7 0.919218 413 7 0.92002 309 7 0.924549 420 7 0.934351 325 7 0.878842 390 7 0.895697 0.8978352 0.811189 0.917291 0.829076 0.909681 0.8492460 0.895454 0.8813378 0.9400078 0.8553553 0.859903 0.9130216 0.93315 0.900490 0.810395 0.8512372 0.8895217 0.9055329 0.9208663 0.748011 0.88686352 0.928084 0.9100156 0.956592 0.913870 0.860480 0.973339 0.890472 0.9148964 0.937127 0.9169409 0.873917 0.919554 1.0000000 0.899583 0.938394 0.8273933 0.918287 0.916517 0.91938 0.932024 0.8802763 7 0.8890613 0.9112074 -0.01985813 7 0.910491 0.86258 0.04791580 0.422482 0.04985554 weaklyHypometh 1 1.00000 insignificant 0.50098160 0.047272 weaklyHypometh 1.00000 1 insignificant -0.0032445 0.8777036 insignificant 1 insignificant 0.8890398 0.9294377 -0.03925751 7 0.897704 0.934770 -0.03706606 9.9951e-01 6.2392e-04 weaklyHypometh 1.0000e+00 1.0399e-01 insignificant 9.9974e-01 4.4140e-03 weaklyHypometh 1.0000e+00 0.73566778 insignificant -0.0015086 9.5596e-01 insignificant 1.0000e+00 insignificant 0.8890398 0.913840 -0.02495193 7 0.897704 0.915923 -0.01821948 5.2379e-01 1.0539e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.9833e-01 5.4331e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01672078 1.9805e-01 insignificant 1.0000e+00 insignificant 0.9117010 0.9284141 -0.0172831 7 0.925075 0.817924 0.1071514 9.8903e-01 6.4260e-02 insignificant 1.0000e+00 1.000000 insignificant 9.6344e-01 0.06445464 insignificant 1.0000e+00 1.00000 insignificant 0.0017360 9.5729e-01 insignificant 1.0000e+00 insignificant 0.9116531 0.913840 -0.0026872 7 0.91437 0.915923 -0.0015518 6.8970e-01 5.2593e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.0051e-01 6.3954e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01347624 5.4129e-01 insignificant 1.0000e+00 insignificant 0.929438 0.913840 0.0152144 7 0.934770 0.915923 0.0188466 4.4487e-02 9.7952e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 1.0093e-02 9.2745e-01 weaklyHypermeth 1.0000000 1.0000e+00 insignificant -0.0152122 0.59038264 insignificant 1.000000 insignificant chr9 18984350 18985350 32419 ENSG00000223211 0.625101 209 6 0.576648 155 6 0.313432 100 5 0.58235 83 5 0.7906145 43 4 0.7492910 165 6 0.7420060 74 6 0.541769 101 5 0.678812 69 5 0.7757066 73 5 0.783730 195 6 0.589835 60 5 0.4838580 158 5 1.00000 1 0 0.376369 102 5 0.8055556 27 2 0.4488387 69 5 0.428751 83 6 0.6915561 100 5 0.7264724 167 6 0.777511 54 5 0.220648 60 4 0.66063 172 6 0.6447650 90 6 0.66429 25 2 0.591968 150 6 0.747183 74 5 0.783333 21 1 0.552249 83 5 0.733729 167 6 0.614182 199 6 0.8327902 310 6 0.671970 125 6 0.596305 95 5 0.800000 131 4 0.223333 41 4 0.760269 62 5 0.1829881 167 6 0.347882 258 6 0.32983 303 6 0.340971 143 5 0.131319 189 5 0.368166 149 6 0.560354 0.5367442 0.356123 0.528786 0.716781 0.697992 0.6904652 0.549687 0.5410321 0.7013179 0.7754197 0.592134 0.3829450 NA 0.332058 0.709832 0.4292281 0.3294538 0.6127638 0.6771501 0.696908 0.22297349 0.573591 0.5818576 0.619745 0.488882 0.709690 0.767386 0.487125 0.6862243 0.530878 0.8222000 0.609715 0.565788 0.7410072 0.250839 0.874707 0.1137692 0.201863 0.206576 0.18085 0.127881 0.2064854 3 0.5909538 0.6476868 -0.05768448 6 0.626567 0.68090 -0.05432784 0.991163 0.03989382 weaklyHypometh 1 1.00000 insignificant 0.89381015 0.186511 insignificant 1.00000 1 insignificant -0.0164046 0.7868130 lowCoverage 1 lowCoverage 0.5909538 0.4919355 0.10625872 6 0.626567 0.525014 0.10155301 1.9758e-03 8.7977e-01 weaklyHypermeth 2.2710e-02 1.0000e+00 weaklyHypermeth 3.5942e-01 5.5559e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0963901 4.3900e-01 lowCoverage 1.0000e+00 lowCoverage 0.5909538 0.304223 0.33203765 6 0.626567 0.326286 0.30028165 3.2979e-14 1.0000e+00 hypermethylated 1.6489e-11 1.0000e+00 hypermethylated 5.0673e-12 1.0000e+00 hypermethylated 2.5337e-09 1.0000e+00 hypermethylated 0.33190010 1.2576e-04 lowCoverage 1.7966e-02 lowCoverage 0.6476868 0.4919355 0.1583121 6 0.680895 0.525014 0.1558809 4.6747e-04 9.8828e-01 weaklyHypermeth 6.9771e-03 1.000000 weaklyHypermeth 2.6744e-01 0.84050148 insignificant 1.0000e+00 1.00000 insignificant 0.1127947 3.7760e-01 lowCoverage 1.0000e+00 lowCoverage 0.6476868 0.304223 0.3893236 6 0.68090 0.326286 0.3546095 1.3348e-15 1.0000e+00 hypermethylated 6.6740e-13 1.0000e+00 hypermethylated 4.4987e-11 1.0000e+00 hypermethylated 2.2493e-08 1.0000e+00 hypermethylated 0.34830468 1.2489e-04 lowCoverage 2.0814e-02 lowCoverage 0.491935 0.304223 0.2510234 6 0.525014 0.326286 0.1987286 9.4513e-03 9.6133e-01 weaklyHypermeth 8.6408e-01 1.0000e+00 insignificant 2.5273e-02 9.8760e-01 weaklyHypermeth 1.0000000 1.0000e+00 insignificant 0.2355100 0.09048523 insignificant 0.994343 insignificant chr9 19103750 19104750 32422 HAUS6 ENSG00000147874 0.753247 160 5 0.739800 134 5 0.620000 41 5 0.79429 156 5 0.6500000 32 3 0.7594943 100 6 0.6850000 57 4 0.736090 80 5 0.800000 25 3 0.8000000 19 2 0.590646 138 5 0.720000 17 3 0.6222222 56 5 0.68952 32 5 0.760000 34 3 0.5666667 17 0 0.3333333 3 0 0.705329 130 4 0.8076923 42 3 0.6896104 75 5 0.666667 13 0 0.800000 9 0 0.77111 64 5 0.5833333 52 5 0.71144 79 5 0.605219 97 5 0.745370 59 5 0.416667 9 0 0.773749 94 3 0.689365 99 5 0.774074 108 5 0.6778432 142 5 0.701389 92 5 0.663480 79 5 0.635673 88 5 0.750000 28 2 0.675776 87 5 0.7350000 76 5 0.757634 102 5 0.77702 109 5 0.737704 136 5 0.721429 62 3 0.772409 181 5 0.692486 0.6045485 0.644643 0.724490 0.616071 0.640895 0.6102679 0.663467 0.7321429 0.7321429 0.6591066 0.625000 0.6964286 0.63010 0.678571 0.500000 NA 0.6157070 0.6909341 0.6672310 0.464286 0.73214286 0.725595 0.5982143 0.628414 0.647998 0.590774 0.503081 0.696985 0.6014031 0.709987 0.6303071 0.542411 0.607637 0.6024436 0.665179 0.558471 0.6569940 0.675403 0.709128 0.66657 0.771246 0.6443507 0 0.6810089 0.7090909 0.00242025 5 0.720435 0.70097 0.01946724 0.329902 0.19250824 insignificant 1 1.00000 insignificant 0.44744747 0.439950 insignificant 1.00000 1 insignificant 0.0065774 0.8705511 lowCoverage 1 lowCoverage 0.6810089 0.6555556 0.05943568 5 0.720435 0.661985 0.05844973 4.2952e-04 8.3224e-01 weaklyHypermeth 5.9655e-03 1.0000e+00 weaklyHypermeth 1.4101e-02 6.9046e-01 weaklyHypermeth 1.8802e-01 1.00000000 insignificant -0.0024059 9.3777e-01 lowCoverage 1.0000e+00 lowCoverage 0.6810089 0.723729 -0.02793231 5 0.720435 0.795883 -0.07544787 9.6827e-01 1.0925e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.2688e-01 1.8143e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.06209178 3.0002e-02 lowCoverage 1.0000e+00 lowCoverage 0.7090909 0.6555556 0.0551689 5 0.700968 0.661985 0.0389825 1.1525e-02 9.8375e-01 weaklyHypermeth 1.2950e-01 1.000000 insignificant 1.1270e-01 0.80707512 insignificant 1.0000e+00 1.00000 insignificant -0.0089832 8.0663e-01 lowCoverage 1.0000e+00 lowCoverage 0.7090909 0.723729 -0.0282350 5 0.70097 0.795883 -0.0949151 8.6266e-01 1.5821e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.9162e-01 2.2880e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.06866913 5.8081e-02 lowCoverage 1.0000e+00 lowCoverage 0.655556 0.723729 -0.0842400 5 0.661985 0.795883 -0.1338976 9.9700e-01 3.3346e-05 weaklyHypometh 1.0000e+00 9.0125e-04 weaklyHypometh 9.9066e-01 1.2879e-02 weaklyHypometh 1.0000000 2.1113e-01 insignificant -0.0596859 0.02068227 lowCoverage 0.439239 lowCoverage chr9 19122450 19123450 32424 PLIN2 ENSG00000147872 0.827820 225 8 0.799058 164 8 0.711567 120 8 0.84467 148 8 0.8349702 53 7 0.7232666 475 8 0.7783497 70 8 0.674215 160 8 0.722012 109 8 0.8734007 121 8 0.862204 240 8 0.800699 76 6 0.7349165 166 8 0.83929 25 4 0.756325 114 8 0.7083333 41 5 0.7039282 107 7 0.620098 170 8 0.7487485 206 8 0.7881475 385 8 0.722979 221 8 0.641281 134 8 0.77378 179 8 0.6918659 153 8 0.72659 103 7 0.775707 165 8 0.758565 413 8 0.643266 102 8 0.813443 166 8 0.821694 186 8 0.836239 175 8 0.8249995 327 8 0.697958 170 8 0.684098 155 8 0.783750 208 8 0.669783 78 6 0.709038 166 8 0.6591221 235 8 0.788672 227 8 0.79845 235 8 0.857181 184 8 0.807446 206 8 0.827181 171 8 0.850628 0.7353985 0.693446 0.838701 0.827982 0.784383 0.7690504 0.778879 0.7459363 0.9013684 0.8617802 0.820800 0.8384893 0.82341 0.865328 0.768812 0.8226661 0.7927323 0.7763132 0.8465320 0.765328 0.64239440 0.818026 0.7158623 0.774059 0.807406 0.783770 0.765749 0.833358 0.8389860 0.862566 0.8088732 0.695943 0.686697 0.7382221 0.681724 0.760941 0.8396588 0.798356 0.824955 0.86486 0.820083 0.8374284 5 0.8092686 0.7530120 0.03084904 8 0.732692 0.67876 0.05393034 0.079163 0.95106556 insignificant 1 1.00000 insignificant 0.09372376 0.955849 insignificant 1.00000 1 insignificant 0.0150672 0.5517225 insignificant 1 insignificant 0.8091339 0.7420949 0.06421622 8 0.726689 0.657407 0.06928208 6.1790e-04 9.9670e-01 weaklyHypermeth 8.1302e-03 1.0000e+00 weaklyHypermeth 7.5861e-03 9.9837e-01 weaklyHypermeth 1.1156e-01 1.00000000 insignificant 0.0669761 1.4644e-02 weaklyHypermeth 2.9287e-01 insignificant 0.8097192 0.847507 -0.02005338 8 0.777065 0.825051 -0.04798634 8.4495e-01 4.9976e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.1136e-01 6.9610e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04818471 2.4157e-02 weaklyHypometh 9.2910e-01 insignificant 0.7530120 0.7425743 0.0332710 8 0.678761 0.673148 0.0056133 1.0294e-02 7.8217e-01 weaklyHypermeth 1.1698e-01 1.000000 insignificant 7.0890e-02 0.83211232 insignificant 6.9500e-01 1.00000 insignificant 0.0519088 7.2752e-02 insignificant 8.6610e-01 insignificant 0.7533362 0.847507 -0.0399855 8 0.75418 0.825051 -0.0708719 9.9939e-01 5.2516e-03 weaklyHypometh 1.0000e+00 5.8351e-01 insignificant 9.9880e-01 1.1522e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.06325194 1.5454e-02 weaklyHypometh 7.7268e-01 insignificant 0.743056 0.847507 -0.0903724 8 0.692387 0.825051 -0.1326644 9.9353e-01 3.7611e-04 weaklyHypometh 1.0000e+00 7.3748e-03 weaklyHypometh 9.9928e-01 8.2712e-03 weaklyHypometh 1.0000000 1.5039e-01 insignificant -0.1151608 0.00065682 weaklyHypometh 0.058225 weaklyHypometh chr9 21606850 21607850 32476 ENSG00000171889 0.806144 235 6 0.816916 168 6 0.675244 121 6 0.84162 142 6 0.8398080 71 6 0.8155727 265 6 0.6614907 66 4 0.750700 118 6 0.656289 82 6 0.7858894 72 6 0.792496 179 6 0.824987 58 4 0.8434597 116 6 0.96759 33 3 0.882310 98 6 0.8446937 62 4 0.7129371 54 4 0.808789 134 6 0.8314841 125 6 0.8348205 227 6 0.848260 54 6 0.694689 94 6 0.82138 146 6 0.7486376 55 4 0.91548 55 5 0.766227 147 6 0.674089 81 4 0.919444 42 4 0.801762 121 6 0.798696 171 6 0.701882 130 6 0.7784051 309 6 0.784077 89 6 0.745323 85 6 0.780385 106 6 0.625926 29 4 0.731397 83 6 0.8261710 164 6 0.871278 239 6 0.77130 200 6 0.821713 169 6 0.821382 157 6 0.785809 185 6 0.832610 0.8072697 0.731072 0.830200 0.815190 0.829721 0.7117812 0.794734 0.6916703 0.8137425 0.8125536 0.831843 0.8571565 0.88914 0.905756 0.858893 0.7421778 0.8436968 0.8515956 0.8522608 0.832482 0.87030898 0.852754 0.7602342 0.891142 0.845433 0.693067 0.906004 0.806916 0.8216202 0.764159 0.8151760 0.753130 0.779692 0.7895117 0.596894 0.765689 0.7789038 0.881630 0.811893 0.84125 0.829826 0.8057671 4 0.8083265 0.8044254 0.00443098 6 0.842074 0.71842 0.12365006 0.149549 0.69363329 insignificant 1 1.00000 insignificant 0.33529038 0.457332 insignificant 1.00000 1 insignificant 0.0105828 0.7153605 insignificant 1 insignificant 0.8082474 0.7661871 0.05139679 6 0.822333 0.808498 0.01383552 3.4714e-02 9.8923e-01 weaklyHypermeth 3.2143e-01 1.0000e+00 insignificant 6.9586e-02 9.7986e-01 insignificant 6.8897e-01 1.00000000 insignificant 0.0507822 1.5653e-01 insignificant 1.0000e+00 insignificant 0.8078512 0.821053 -0.02079385 6 0.796952 0.832890 -0.03593796 7.4042e-01 4.4266e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 6.8401e-01 2.6585e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.01463462 5.5828e-01 insignificant 1.0000e+00 insignificant 0.8054363 0.7661871 0.0448753 6 0.766560 0.808498 -0.0419375 7.8209e-02 8.4576e-01 insignificant 6.8604e-01 1.000000 insignificant 5.4584e-02 0.98005244 insignificant 5.6272e-01 1.00000 insignificant 0.0401994 2.9039e-01 insignificant 1.0000e+00 insignificant 0.8057348 0.821053 -0.0239476 6 0.78083 0.832890 -0.0520595 9.7373e-01 8.0929e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 7.9789e-01 1.8744e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02521743 3.9563e-01 insignificant 1.0000e+00 insignificant 0.765343 0.821053 -0.0718541 6 0.781140 0.832890 -0.0517500 9.9418e-01 1.4902e-02 weaklyHypometh 1.0000e+00 1.7740e-01 insignificant 9.9910e-01 3.3894e-02 weaklyHypometh 1.0000000 4.7074e-01 insignificant -0.0654168 0.08238240 insignificant 0.949108 insignificant chr9 27352650 27353650 32563 C9orf11 ENSG00000120160 0.790316 79 5 0.809608 83 5 0.794805 43 5 0.89204 76 5 0.8500000 34 4 0.9080526 147 5 0.7720635 41 5 0.715213 85 5 0.714685 39 5 0.7224242 39 5 0.762888 171 5 0.866667 21 2 0.6343137 57 5 0.98462 36 2 0.718954 60 5 0.7333333 11 0 NA 0 0 0.823147 141 5 0.7857143 78 5 0.7869609 103 5 0.716667 32 4 0.933333 31 5 0.85607 72 5 0.7930556 69 5 0.76270 48 5 0.850371 109 5 0.764937 72 5 0.784722 26 2 0.942484 43 2 0.886564 121 5 0.771269 60 5 0.8398833 142 5 0.832647 66 5 0.835000 32 5 0.901357 80 5 0.900000 8 0 0.798929 45 5 0.7700549 92 5 0.881941 71 5 0.87511 55 2 0.771596 98 5 0.860000 26 2 0.907843 59 5 0.773932 0.8253166 0.789502 0.862559 0.896875 0.891154 0.8246528 0.815521 0.7562791 0.7381629 0.8152852 0.927083 0.6773131 0.97596 0.777301 0.583333 NA 0.7949627 0.7965030 0.7905392 0.911458 0.89583333 0.875963 0.7955729 0.862930 0.856978 0.761839 0.752604 0.910131 0.8686378 0.720922 0.8770417 0.799969 0.783854 0.8559098 0.947917 0.804520 0.8233459 0.859804 0.854336 0.80978 0.859375 0.8560049 2 0.8043155 0.8303030 -0.02476359 5 0.785697 0.73420 0.05149862 0.669783 0.37213581 insignificant 1 1.00000 insignificant 0.91634026 0.266109 insignificant 1.00000 1 insignificant -0.0322346 0.2593862 lowCoverage 1 lowCoverage 0.8041698 0.8297214 -0.01975012 5 0.749979 0.854357 -0.10437774 8.8481e-01 3.5197e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6769e-01 4.0191e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0467278 1.2713e-01 lowCoverage 1.0000e+00 lowCoverage 0.8046234 0.834951 -0.02916425 5 0.799975 0.838777 -0.03880137 6.2415e-01 4.0258e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 8.7752e-01 2.8251e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.06636087 5.1054e-02 lowCoverage 1.0000e+00 lowCoverage 0.8300971 0.8297214 0.0028492 5 0.689898 0.854357 -0.1644595 7.5943e-01 6.7277e-01 insignificant 1.0000e+00 1.000000 insignificant 8.5688e-01 0.60900486 insignificant 1.0000e+00 1.00000 insignificant -0.0144931 6.3524e-01 lowCoverage 1.0000e+00 lowCoverage 0.8311057 0.834951 -0.0039558 5 0.82788 0.838777 -0.0108994 6.2168e-01 9.9292e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 8.6032e-01 1.9455e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03412622 2.9654e-01 lowCoverage 1.0000e+00 lowCoverage 0.829193 0.834951 -0.0137185 5 0.825229 0.838777 -0.0135481 5.7458e-01 2.8885e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.1006e-01 2.6718e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.0196331 0.55215738 lowCoverage 1.000000 lowCoverage chr9 27472750 27473750 32591 C9orf11 ENSG00000120160 0.664262 213 9 0.690676 121 9 0.328924 59 5 0.73367 176 8 0.6666667 116 9 0.7226852 138 9 0.4798701 115 9 0.718410 151 9 0.741736 77 8 0.7108796 69 7 0.737092 172 9 0.833333 14 0 0.7111111 107 9 0.60619 101 9 0.637374 67 8 0.5818182 26 1 0.6250000 8 0 0.656252 226 8 0.6289562 63 5 0.7445887 61 9 0.866667 23 1 0.857143 8 0 0.69977 105 5 0.5888889 67 9 0.71334 135 5 0.629315 100 9 0.796988 67 8 0.700000 15 1 0.710779 151 9 0.616861 114 9 0.750916 95 9 0.6112259 91 9 0.651371 145 9 0.582540 77 5 0.553030 90 9 0.687500 16 0 0.559341 87 5 0.6898707 105 9 0.608651 166 8 0.66286 155 9 0.644231 187 8 0.742047 136 4 0.718750 147 4 0.623294 0.5876735 0.399768 0.655601 0.598983 0.643493 0.5746388 0.657969 0.6437692 0.5493134 0.6906624 0.757302 0.6149813 0.68662 0.668664 0.600000 0.6952752 0.6133123 0.6056520 0.7570894 0.808989 0.79413644 0.627736 0.5642946 0.682369 0.622236 0.593876 0.744478 0.617212 0.5969365 0.750463 0.6174242 0.585364 0.559390 0.4709738 0.693711 0.526123 0.6866242 0.593080 0.608721 0.63073 0.706234 0.6853933 0 0.6466346 0.6773196 -0.01189765 9 0.682391 0.61773 0.06465601 0.603030 0.53186954 insignificant 1 1.00000 insignificant 0.97122058 0.122282 insignificant 1.00000 1 insignificant -0.0508504 0.1713481 insignificant 1 insignificant 0.6464355 0.6096154 0.04833423 9 0.676245 0.610109 0.06613572 4.7298e-03 9.9352e-01 weaklyHypermeth 5.1411e-02 1.0000e+00 weaklyHypermeth 6.3633e-02 9.9320e-01 insignificant 6.4275e-01 1.00000000 insignificant 0.0403660 2.7222e-01 insignificant 1.0000e+00 insignificant 0.6464355 0.628319 -0.00804737 4 0.676245 0.665807 0.01043748 5.5415e-01 4.0862e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.6193e-01 4.9847e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.01433253 6.8339e-01 insignificant 1.0000e+00 insignificant 0.6780186 0.6096154 0.0606873 9 0.673893 0.610109 0.0637837 1.4170e-02 9.9761e-01 weaklyHypermeth 1.5402e-01 1.000000 insignificant 4.6053e-03 0.99991058 weaklyHypermeth 7.9402e-02 1.00000 weaklyHypermeth 0.0912164 2.7955e-02 weaklyHypermeth 4.5089e-01 insignificant 0.6780186 0.628319 0.0107868 4 0.67389 0.665807 0.0080855 1.8232e-01 5.0228e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 1.7233e-01 8.4457e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.03651782 3.3293e-01 insignificant 1.0000e+00 insignificant 0.609615 0.628319 -0.0540234 4 0.610109 0.665807 -0.0556982 9.3162e-01 2.4052e-02 lowCoverage 1.0000e+00 2.6724e-01 lowCoverage 9.9355e-01 1.2315e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage -0.0546985 0.15804327 insignificant 1.000000 insignificant chr9 29614750 29615750 32619 ENSG00000217213 0.803136 604 18 0.718485 228 11 0.752332 231 11 0.90207 452 18 0.8484642 101 10 0.8563260 493 18 0.8590173 174 12 0.855273 207 12 0.719927 129 11 0.9114446 174 10 0.866293 342 16 0.908069 92 11 0.8784155 188 12 0.92857 56 4 0.879444 157 14 0.7908674 112 11 0.8177047 846 10 0.875461 450 17 0.8261574 132 16 0.7938533 337 18 0.813889 52 4 0.822299 146 12 0.89491 377 19 0.8550170 75 7 0.95965 128 13 0.836899 369 17 0.854592 159 12 0.855952 61 6 0.903220 149 11 0.809598 290 16 0.846149 265 16 0.8257316 556 18 0.808712 228 12 0.745391 194 17 0.794120 314 18 0.780392 61 2 0.825893 87 7 0.7593506 321 19 0.899272 556 18 0.88837 678 18 0.899240 581 18 0.828301 448 18 0.865135 521 18 0.875179 0.8504168 0.812755 0.944003 0.842510 0.876267 0.8699173 0.809457 0.9000434 0.9145647 0.9319297 0.931090 0.9172900 0.90408 0.857798 0.813167 0.8537844 0.8651906 0.8665179 0.8903168 0.887049 0.83754960 0.883158 0.8845083 0.914882 0.867880 0.861839 0.850541 0.892660 0.8866085 0.852304 0.9082038 0.840908 0.672023 0.7964737 0.845413 0.831272 0.8009810 0.928445 0.913165 0.92172 0.923692 0.8984033 6 0.8749091 0.8698135 0.00383702 17 0.850607 0.85006 0.00054557 0.579910 0.70776525 insignificant 1 1.00000 insignificant 0.86195142 0.121274 insignificant 1.00000 1 insignificant -0.0169265 0.3695846 insignificant 1 insignificant 0.8749091 0.7950207 0.07842835 17 0.850607 0.779895 0.07071289 7.2923e-09 1.0000e+00 weaklyHypermeth 2.4308e-07 1.0000e+00 weaklyHypermeth 2.6677e-03 9.9019e-01 weaklyHypermeth 4.5995e-02 1.00000000 weaklyHypermeth 0.0539223 9.0219e-03 weaklyHypermeth 2.2005e-01 insignificant 0.8745911 0.896911 -0.02294044 17 0.810102 0.887476 -0.07737391 9.9156e-01 1.1135e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.0387e-01 2.1236e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03649886 7.8618e-02 insignificant 1.0000e+00 insignificant 0.8698135 0.7950207 0.0747533 17 0.850062 0.779895 0.0701673 1.5637e-07 9.9985e-01 weaklyHypermeth 4.7383e-06 1.000000 weaklyHypermeth 1.1608e-03 0.99973518 weaklyHypermeth 3.0547e-02 1.00000 weaklyHypermeth 0.0708488 1.2727e-03 weaklyHypermeth 5.9962e-02 weaklyHypermeth 0.8698135 0.896874 -0.0185427 17 0.85006 0.881850 -0.0317882 9.2831e-01 2.7714e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 2.4149e-01 5.6694e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01957237 3.1120e-01 insignificant 1.0000e+00 insignificant 0.795021 0.896874 -0.1005440 17 0.779895 0.881850 -0.1019555 1.0000e+00 1.2495e-08 weaklyHypometh 1.0000e+00 6.9416e-07 weaklyHypometh 9.9780e-01 2.5385e-04 weaklyHypometh 1.0000000 1.1539e-02 weaklyHypometh -0.0904212 0.00088750 weaklyHypometh 0.068269 weaklyHypometh chr9 32593350 32594350 32635 NDUFB6 ENSG00000165264 0.749337 202 8 0.592977 170 8 0.523333 40 5 0.71681 127 7 0.6875387 74 7 0.8238332 164 8 0.6222222 60 8 0.748145 101 8 0.733333 24 1 0.8791667 43 4 0.710389 156 8 0.750000 16 0 0.6560477 85 8 0.76238 44 5 0.694444 61 5 0.4000000 13 0 0.6666667 12 0 0.775556 163 5 0.7627260 119 4 0.6887291 125 8 0.902778 38 4 0.900000 21 2 0.71929 63 8 0.5714286 32 3 0.76601 165 3 0.787919 97 4 0.848214 57 4 0.687500 12 0 0.657543 116 8 0.895238 57 4 0.777473 87 4 0.7807843 104 8 0.479524 64 8 0.554549 88 3 0.578745 87 5 0.696970 33 3 0.476136 81 8 0.5947562 163 4 0.733103 120 8 0.72502 159 7 0.662295 146 8 0.525815 61 3 0.549779 102 5 0.818565 0.6042980 0.763043 0.804658 0.616027 0.831269 0.7012077 0.757525 0.7644928 0.9365942 0.8300374 0.767856 0.8587717 0.62215 0.804348 0.688145 0.7606092 0.8200483 0.7929262 0.8897062 1.000000 0.94565217 0.683551 0.6604555 0.737996 0.816606 0.940217 0.782609 0.737514 0.9961055 0.839212 0.8139580 0.585921 0.503466 0.5307755 0.644939 0.524440 0.6907998 0.818341 0.800758 0.69340 0.604500 0.6734323 0 0.7318029 0.7714959 -0.03044480 4 0.695229 0.76649 -0.07125926 0.962122 0.03654173 lowCoverage 1 1.00000 lowCoverage 0.99329140 0.025481 lowCoverage 1.00000 1 lowCoverage -0.0773335 0.0537491 lowCoverage 1 lowCoverage 0.7318029 0.6007752 0.14482947 8 0.695229 0.560443 0.13478637 1.9113e-05 9.9954e-01 weaklyHypermeth 3.2395e-04 1.0000e+00 weaklyHypermeth 1.1293e-04 9.9931e-01 weaklyHypermeth 4.1826e-03 1.00000000 weaklyHypermeth 0.1337350 8.0682e-03 weaklyHypermeth 2.0688e-01 insignificant 0.7318029 0.792517 -0.00982293 3 0.695229 0.682509 0.01272064 1.7550e-01 2.0801e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.9953e-02 4.1894e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.05798023 2.8067e-01 insignificant 1.0000e+00 insignificant 0.7714959 0.6007752 0.1787841 4 0.766489 0.560443 0.2060456 7.3813e-06 1.0000e+00 lowCoverage 1.6107e-04 1.000000 lowCoverage 5.8851e-05 0.99999999 lowCoverage 2.4521e-03 1.00000 lowCoverage 0.2110685 4.6385e-04 lowCoverage 2.8991e-02 lowCoverage 0.7714959 0.792517 0.0241393 3 0.76649 0.682509 0.0839799 4.4947e-02 2.3741e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 1.8248e-02 8.8130e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.13531369 3.2969e-02 lowCoverage 1.0000e+00 lowCoverage 0.600775 0.792517 -0.1632319 3 0.560443 0.682509 -0.1220657 9.9824e-01 1.5238e-03 lowCoverage 1.0000e+00 2.5396e-02 lowCoverage 9.9829e-01 1.9519e-02 lowCoverage 1.0000000 2.9861e-01 lowCoverage -0.0757548 0.20456088 insignificant 1.000000 insignificant chr9 33032850 33033850 32652 ENSG00000222169 0.783868 191 5 0.705989 140 5 0.510012 98 5 0.68321 140 5 0.6411172 58 5 0.7221665 242 5 0.6722021 84 5 0.683929 125 5 0.734727 71 3 0.7495938 89 5 0.739049 244 5 0.448107 42 3 0.6770083 113 6 0.63889 25 1 0.654398 85 5 0.5295425 47 3 0.7337520 64 3 0.698499 155 6 0.7241507 118 5 0.7927792 236 5 0.713580 47 3 0.724420 56 3 0.71059 113 5 0.8539956 55 2 0.61970 37 4 0.787029 188 5 0.572772 55 4 0.628205 47 2 0.762963 112 5 0.776723 180 5 0.752978 186 5 0.7714928 273 6 0.631321 106 5 0.483040 83 5 0.553365 140 5 0.608571 26 3 0.564502 100 5 0.6241108 165 5 0.782900 152 5 0.74143 162 5 0.700126 144 5 0.742758 131 5 0.719492 158 5 0.812348 0.6719389 0.606687 0.829224 0.739360 0.794486 0.7048089 0.733580 0.7183631 0.7471618 0.7680344 0.645326 0.7844163 0.78716 0.724135 0.678057 0.6806040 0.7345502 0.7605263 0.8239087 0.750631 0.74367653 0.774511 0.8612583 0.707204 0.835069 0.791296 0.780600 0.820266 0.8335396 0.736484 0.8076534 0.605692 0.380296 0.4269412 0.769362 0.672003 0.5898716 0.835356 0.843752 0.76718 0.799285 0.8176948 2 0.6848331 0.7449963 -0.04259460 5 0.684339 0.77339 -0.08905406 0.997730 0.00598245 weaklyHypometh 1 0.99707 insignificant 0.99303201 0.018531 weaklyHypometh 1.00000 1 insignificant -0.0467207 0.1399565 lowCoverage 1 lowCoverage 0.6848331 0.5193548 0.18293881 5 0.684339 0.643007 0.04133133 1.3345e-05 9.0230e-01 weaklyHypermeth 2.3411e-04 1.0000e+00 weaklyHypermeth 1.1493e-01 9.2415e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0986643 6.0919e-03 lowCoverage 1.6031e-01 lowCoverage 0.6848562 0.706827 -0.05757399 5 0.687284 0.733927 -0.04664298 9.8481e-01 1.2937e-02 weaklyHypometh 1.0000e+00 8.5035e-01 insignificant 9.8959e-01 4.4905e-03 weaklyHypometh 1.0000e+00 5.6131e-01 insignificant -0.06119256 2.0416e-02 lowCoverage 8.5066e-01 lowCoverage 0.7449963 0.5193548 0.2252004 5 0.773393 0.643007 0.1303854 5.1172e-06 9.9928e-01 hypermethylated 1.1900e-04 1.000000 hypermethylated 4.7203e-03 0.99973366 weaklyHypermeth 8.0006e-02 1.00000 weaklyHypermeth 0.1453850 5.5160e-04 lowCoverage 3.0645e-02 lowCoverage 0.7446177 0.706827 -0.0158088 5 0.73563 0.733927 0.0016979 6.9971e-01 2.1991e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.8407e-01 2.0065e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01447190 6.0072e-01 lowCoverage 1.0000e+00 lowCoverage 0.518578 0.706827 -0.2427334 5 0.583509 0.733927 -0.1504184 9.8052e-01 7.0654e-04 hypomethylated 1.0000e+00 1.2846e-02 hypomethylated 9.9078e-01 7.7730e-03 weaklyHypometh 1.0000000 1.5039e-01 insignificant -0.1598569 0.00033316 lowCoverage 0.033316 lowCoverage chr9 33366350 33367350 32682 ENSG00000200544 0.626800 146 4 0.531973 99 7 0.673469 45 7 0.65026 128 7 0.6671875 95 7 0.6844341 90 7 0.4647727 65 7 0.681232 87 7 0.685714 35 5 0.6232993 50 7 0.698866 152 7 0.648810 33 4 0.6037759 116 7 0.53241 76 7 0.660449 77 7 0.6603175 30 4 0.6291209 41 1 0.522449 188 6 0.6979592 37 6 0.6017316 50 4 0.535714 19 0 0.904762 9 0 0.71429 79 5 0.5104167 36 4 0.60929 107 6 0.631106 80 7 0.708333 51 6 0.785714 15 0 0.692403 111 7 0.646825 68 3 0.626531 54 6 0.5790816 46 7 0.666387 98 7 0.576479 92 7 0.583333 55 6 0.416667 9 0 0.648291 97 7 0.6244898 72 6 0.618184 119 7 0.71518 107 7 0.681017 119 7 0.552778 93 4 0.684967 80 7 0.677519 0.5747619 0.709524 0.698930 0.671250 0.685095 0.5344318 0.700392 0.7600000 0.6988095 0.7319841 0.705918 0.6583983 0.67083 0.670006 0.702222 0.6403846 0.5909517 0.7485714 0.6424242 0.600000 0.93333333 0.750000 0.5916667 0.666333 0.751313 0.657143 0.850000 0.722340 0.6277778 0.667143 0.6107143 0.692941 0.597980 0.5916667 0.410000 0.631699 0.6742857 0.665458 0.719286 0.72807 0.551667 0.7250654 0 0.6583282 0.7051852 -0.02267895 6 0.611741 0.63141 -0.01967055 0.943814 0.24563455 insignificant 1 1.00000 insignificant 0.98635453 0.296703 insignificant 1.00000 1 insignificant -0.0347870 0.3326481 lowCoverage 1 lowCoverage 0.6589100 0.6524823 0.04327615 7 0.643667 0.615216 0.02845075 7.5676e-02 8.6289e-01 insignificant 6.4681e-01 1.0000e+00 insignificant 5.3703e-02 8.1013e-01 insignificant 5.6530e-01 1.00000000 insignificant 0.0413101 3.3362e-01 insignificant 1.0000e+00 insignificant 0.6583282 0.722008 -0.02380156 7 0.611741 0.725753 -0.11401230 8.6208e-01 2.1054e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6547e-01 3.7973e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02317375 5.0306e-01 insignificant 1.0000e+00 insignificant 0.7064083 0.6524823 0.0597003 6 0.668958 0.615216 0.0537415 3.8171e-02 9.8282e-01 weaklyHypermeth 3.5674e-01 1.000000 insignificant 4.9771e-02 0.98289248 weaklyHypermeth 5.2948e-01 1.00000 insignificant 0.0760971 1.4199e-01 lowCoverage 1.0000e+00 lowCoverage 0.7051852 0.722008 0.0085847 6 0.63141 0.725753 -0.0943417 5.3745e-01 5.6965e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.0900e-01 7.7389e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01161320 7.9086e-01 lowCoverage 1.0000e+00 lowCoverage 0.652482 0.720388 -0.0602692 7 0.615216 0.647397 -0.0321808 7.1587e-01 6.0579e-02 insignificant 1.0000e+00 6.2453e-01 insignificant 7.4714e-01 1.4213e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.0644839 0.20273347 insignificant 1.000000 insignificant chr9 33850950 33851950 32714 ENSG00000200834 0.695896 102 5 0.706522 48 3 0.555556 15 1 0.92485 79 5 0.7420199 45 4 0.7508081 136 5 0.6060606 36 4 0.834615 51 5 0.740000 21 3 0.9000000 11 0 0.837036 86 6 0.597222 19 2 0.7725146 48 2 0.71250 41 3 0.733333 14 2 1.0000000 2 0 1.0000000 2 0 0.778140 100 5 0.8772727 51 5 0.8787908 93 4 1.000000 28 3 1.000000 4 0 0.73901 77 3 0.9130952 35 5 0.80952 23 2 0.761614 71 3 0.595238 34 2 0.875000 7 0 0.867725 34 3 0.880682 76 5 0.671111 43 5 0.7730222 103 5 0.695299 57 5 0.757635 48 3 0.562500 17 2 0.451923 53 2 0.531429 42 5 0.8209150 94 5 0.774024 72 4 0.77342 112 6 0.800165 101 6 0.666667 27 5 0.812769 96 6 0.687500 0.6875000 0.666667 0.850649 0.631868 0.705556 0.6590909 0.800000 0.6750000 0.8750000 0.7849650 0.597222 0.7156433 0.64062 0.850000 0.757554 0.9357857 0.7710623 0.8500000 0.8631944 1.000000 1.00000000 0.628517 0.9226190 0.761905 0.734375 0.517857 0.875000 0.752733 0.8437500 0.622222 0.6736842 0.592949 0.714286 0.5625000 0.451923 0.414286 0.7830882 0.708333 0.769231 0.76950 0.583333 0.7418803 0 0.8126888 0.8728972 -0.04093036 3 0.775338 0.80917 -0.03382717 0.909706 0.11716528 lowCoverage 1 1.00000 lowCoverage 0.83688477 0.307063 lowCoverage 1.00000 1 lowCoverage -0.0416784 0.3658114 lowCoverage 1 lowCoverage 0.8126888 0.7845659 0.01938112 5 0.775338 0.774044 0.00129424 1.9274e-02 5.2865e-01 weaklyHypermeth 1.9083e-01 1.0000e+00 insignificant 2.3077e-02 8.9408e-01 weaklyHypermeth 2.9211e-01 1.00000000 insignificant 0.1455399 5.7453e-02 lowCoverage 7.5913e-01 lowCoverage 0.8136273 0.825980 -0.00874891 5 0.850225 0.749909 0.10031629 9.6653e-01 9.2542e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.0460e-01 9.7606e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01674737 6.6574e-01 lowCoverage 1.0000e+00 lowCoverage 0.8728972 0.7845659 0.0662201 3 0.809165 0.774044 0.0351214 4.6523e-02 8.3081e-01 lowCoverage 4.3077e-01 1.000000 lowCoverage 3.0194e-02 0.96630439 lowCoverage 3.5110e-01 1.00000 lowCoverage 0.1872183 2.3480e-02 lowCoverage 4.2690e-01 lowCoverage 0.8728972 0.827160 0.0329638 3 0.80917 0.791530 0.0176349 3.5560e-01 8.4227e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 5.2604e-01 8.8859e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.05842578 2.0446e-01 lowCoverage 1.0000e+00 lowCoverage 0.784566 0.827160 -0.0269002 5 0.774044 0.791530 -0.0174865 7.2551e-01 3.3479e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.5431e-01 2.1607e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.1287926 0.08502944 lowCoverage 0.949108 lowCoverage chr9 33859150 33860150 32715 ENSG00000210688 0.778799 126 5 0.693636 69 4 0.786044 52 4 0.86096 97 5 0.6933333 38 3 0.7963800 181 5 0.8745833 68 3 0.779700 73 5 0.432269 59 3 0.8165850 55 3 0.845630 168 5 0.607843 43 2 0.8653846 96 5 0.85714 17 2 0.743923 72 5 0.5936508 35 2 0.7277778 32 2 0.817647 109 5 0.6934167 137 3 0.6325242 152 5 0.844444 34 3 0.756818 41 3 0.90722 83 3 0.9413043 76 5 0.71429 29 3 0.856212 124 5 0.895556 49 3 0.638622 33 3 0.725152 72 3 0.783481 140 5 0.727422 141 5 0.7921717 206 5 0.560599 65 3 0.828788 39 2 0.669651 97 5 0.662121 30 2 0.646667 52 3 0.7283643 130 5 0.823460 123 5 0.86257 115 5 0.783929 100 5 0.671296 91 5 0.838871 119 5 0.849978 0.7544444 0.854607 0.899731 0.826049 0.816595 0.8485031 0.842757 0.6626953 0.8295933 0.8931903 0.747563 0.9125356 0.83415 0.779662 0.723398 0.8183981 0.8243137 0.7971448 0.8482129 0.905350 0.86767677 0.902737 0.9743961 0.734392 0.914745 0.835885 0.824252 0.845208 0.8447960 0.921447 0.7956231 0.719449 0.733895 0.7118056 0.756734 0.738025 0.7801677 0.867145 0.877713 0.86131 0.830521 0.8650928 2 0.8183443 0.8531128 -0.03586095 5 0.757327 0.74429 0.01303328 0.917761 0.12756971 insignificant 1 1.00000 insignificant 0.98277189 0.061416 insignificant 1.00000 1 insignificant -0.0536961 0.1542744 lowCoverage 1 lowCoverage 0.8186158 0.7506053 0.07852243 3 0.775459 0.694249 0.08120972 2.0617e-04 9.8070e-01 lowCoverage 3.0771e-03 1.0000e+00 lowCoverage 2.7775e-03 9.9041e-01 lowCoverage 4.7076e-02 1.00000000 lowCoverage 0.0621630 1.9225e-01 lowCoverage 1.0000e+00 lowCoverage 0.8183443 0.848540 -0.02091482 5 0.757327 0.822196 -0.06486943 8.7951e-01 1.5846e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7133e-01 1.2991e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.05116445 2.5553e-01 lowCoverage 1.0000e+00 lowCoverage 0.8553275 0.7506053 0.1134339 3 0.813152 0.694249 0.1189031 4.4162e-05 9.9999e-01 lowCoverage 7.4850e-04 1.000000 lowCoverage 3.4055e-04 0.99998763 lowCoverage 1.1352e-02 1.00000 lowCoverage 0.1158592 2.7513e-02 lowCoverage 4.5089e-01 lowCoverage 0.8531128 0.848540 0.0143647 5 0.74429 0.822196 -0.0779027 3.4454e-01 2.2479e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.6487e-01 4.8667e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00253170 9.5413e-01 lowCoverage 1.0000e+00 lowCoverage 0.750605 0.847985 -0.1001813 3 0.694249 0.786635 -0.0923864 8.7705e-01 8.2701e-04 lowCoverage 1.0000e+00 1.4509e-02 lowCoverage 9.6790e-01 1.2662e-03 lowCoverage 1.0000000 4.2207e-02 lowCoverage -0.1133275 0.04881872 lowCoverage 0.687588 lowCoverage chr9 35100650 35101650 32741 KIAA1539 ENSG00000005238 0.010322 268 8 0.115079 194 8 0.023930 377 8 0.00000 225 8 0.0091575 274 8 0.1252917 760 8 0.0018939 436 8 0.000000 274 8 0.113960 283 8 0.0030492 503 8 0.113290 332 8 0.111111 366 8 0.0083965 272 8 0.11111 257 8 0.000000 355 8 0.0036408 629 8 NA 0 0 0.092843 353 8 0.0041219 558 8 0.0048262 624 8 0.000000 124 8 0.000000 9 0 0.13040 229 8 0.0095238 42 2 0.06250 33 5 0.118280 348 8 0.012735 437 8 0.100000 170 8 0.111111 323 8 0.117284 418 8 0.000000 448 8 0.0060976 484 8 0.111111 262 8 0.000000 363 8 0.000000 105 8 0.125000 14 0 0.071717 166 11 0.1167667 556 8 0.027778 547 8 0.11111 357 8 0.000000 310 8 0.027055 373 8 0.060386 172 8 0.011339 0.0051979 0.030807 0.000000 0.011660 0.016191 0.0022052 0.000000 0.0036114 0.0029267 0.0027617 0.000000 0.0095651 0.00000 0.000000 0.004239 NA 0.0020977 0.0042717 0.0070241 0.000000 0.00056018 0.022333 0.0112676 0.000000 0.010904 0.014127 0.000000 0.000000 0.0080856 0.000000 0.0070995 0.000000 0.000000 0.0000000 0.145540 0.012408 0.0073534 0.000000 0.000000 0.00000 0.029909 0.0026536 5 0.0062713 0.0075041 0.00028411 8 0.082833 0.09307 -0.01023727 0.267497 0.79071050 insignificant 1 1.00000 insignificant 0.08370214 0.983860 insignificant 1.00000 1 insignificant -0.0108176 0.5969780 insignificant 1 insignificant 0.0062679 0.0088677 0.00194509 8 0.075302 0.081215 -0.00591243 3.5403e-01 9.9894e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.7348e-01 8.2042e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0259224 3.5803e-01 insignificant 1.0000e+00 insignificant 0.0062739 0.004548 0.00291630 8 0.092036 0.050441 0.04159549 1.1963e-01 9.8376e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.4243e-01 9.8845e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00042262 9.8556e-01 insignificant 1.0000e+00 insignificant 0.0075041 0.0082136 0.0024541 8 0.093070 0.069336 0.0237336 5.9854e-01 7.6927e-01 insignificant 1.0000e+00 1.000000 insignificant 9.0809e-01 0.81160237 insignificant 1.0000e+00 1.00000 insignificant -0.0151048 6.0859e-01 insignificant 1.0000e+00 insignificant 0.0075065 0.004548 0.0035535 8 0.10341 0.050441 0.0529702 3.3991e-01 9.4785e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.8463e-01 8.7286e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01039502 6.8547e-01 insignificant 1.0000e+00 insignificant 0.007555 0.004548 0.0012943 8 0.054818 0.050441 0.0043773 8.3551e-01 9.7714e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.5478e-01 9.7862e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.0254998 0.42232154 insignificant 1.000000 insignificant chr9 35951550 35952550 32766 OR2S2 ENSG00000122718 0.810714 80 5 0.666956 103 5 0.560000 21 3 0.75385 90 2 0.7476190 34 5 0.6835884 144 5 0.6166667 43 3 0.706667 78 5 0.600000 20 0 1.0000000 2 0 0.712456 145 5 0.750000 7 0 0.7666667 14 0 0.71429 12 0 0.761111 25 3 0.5833333 12 0 NA 0 0 0.660790 98 5 0.7333333 36 2 0.6316239 69 5 0.808333 28 3 0.666667 3 0 0.74221 60 5 0.7444444 26 3 0.73849 77 5 0.766974 87 5 0.771429 35 5 0.833333 8 0 0.773333 62 5 0.776389 95 5 0.730610 137 5 0.8076087 94 5 0.741176 84 5 0.600000 34 2 0.794180 84 3 1.000000 27 2 0.655219 48 5 0.6385965 112 5 0.856140 56 5 0.78416 72 5 0.717992 102 5 0.395238 19 2 0.707302 133 5 0.799745 0.6536548 0.528571 0.744505 0.729592 0.666894 0.5892857 0.691667 0.5714286 0.7261143 0.7883170 0.767080 0.7678571 0.78571 0.692857 0.707638 NA 0.6500561 0.7261905 0.7434066 0.753571 0.76335560 0.726976 0.6785714 0.723781 0.753994 0.765306 1.000000 0.761905 0.7199405 0.717092 0.7969720 0.722689 0.571429 0.7794785 1.000000 0.778932 0.6296992 0.847744 0.772948 0.69897 0.547619 0.6934240 0 0.7730359 0.7949438 -0.04150935 5 0.602939 0.75601 -0.15306657 0.982573 0.00555771 weaklyHypometh 1 0.99707 insignificant 0.96640831 0.082722 insignificant 1.00000 1 insignificant -0.0549159 0.0439234 lowCoverage 1 lowCoverage 0.7743191 0.7352185 -0.00057827 5 0.758984 0.602091 0.15689339 7.7083e-01 1.1173e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8168e-01 2.4536e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0297923 6.5695e-01 lowCoverage 1.0000e+00 lowCoverage 0.7730359 0.795812 -0.02320266 5 0.602939 0.529418 0.07352047 8.7108e-01 5.5612e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.2629e-01 7.4408e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01623595 8.5148e-01 lowCoverage 1.0000e+00 lowCoverage 0.7949081 0.7371134 0.0384207 5 0.758408 0.722509 0.0358986 8.4256e-02 7.7674e-01 insignificant 7.2634e-01 1.000000 insignificant 6.4680e-01 0.40685904 insignificant 1.0000e+00 1.00000 insignificant 0.0251236 6.9709e-01 lowCoverage 1.0000e+00 lowCoverage 0.7957746 0.797900 0.0180128 5 0.79867 0.617655 0.1810182 4.0069e-01 8.5678e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.0461e-01 9.4484e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.07115182 4.2107e-01 lowCoverage 1.0000e+00 lowCoverage 0.737113 0.800000 -0.0225172 5 0.722509 0.741186 -0.0186767 4.8607e-01 3.7833e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.2933e-01 8.0412e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.0460282 0.65469529 lowCoverage 1.000000 lowCoverage chr9 36573950 36574950 32786 MELK ENSG00000165304 0.702144 336 12 0.707814 153 11 0.737770 144 11 0.80676 308 12 0.7797764 106 11 0.6854604 349 12 0.6103175 93 11 0.749854 182 9 0.770401 80 5 0.7475034 115 9 0.827521 482 12 0.698611 66 6 0.7356715 137 12 0.76250 62 6 0.736652 166 12 0.7500000 46 3 0.6344542 95 7 0.772700 314 12 0.7581381 268 11 0.8027473 230 9 0.851999 98 9 0.809208 102 10 0.75021 245 12 0.7733766 38 3 0.84858 107 9 0.815698 251 11 0.737388 102 9 0.912637 54 5 0.777654 171 11 0.642342 276 11 0.671451 229 11 0.8125554 381 11 0.611443 160 9 0.717142 183 11 0.650680 216 11 0.643050 93 7 0.675950 114 9 0.7434466 238 11 0.809286 391 12 0.83271 329 12 0.718878 345 12 0.828404 248 12 0.777703 332 12 0.794652 0.7493980 0.740785 0.807220 0.833009 0.793854 0.7831752 0.780636 0.7788542 0.8594842 0.8064313 0.745077 0.8360309 0.79959 0.775938 0.785088 0.7026783 0.8288108 0.7791035 0.7986363 0.893863 0.80052404 0.802915 0.8426902 0.832691 0.839832 0.811161 0.892105 0.849811 0.7572410 0.718183 0.8297164 0.684300 0.738390 0.7077104 0.667781 0.723783 0.7778247 0.844740 0.831983 0.75674 0.862904 0.8494385 4 0.7687567 0.7789679 -0.01182734 11 0.770065 0.74539 0.02467643 0.848857 0.17128392 insignificant 1 1.00000 insignificant 0.98868555 0.031553 weaklyHypometh 1.00000 1 insignificant -0.0447516 0.0921411 insignificant 1 insignificant 0.7685707 0.6992032 0.07112234 11 0.737217 0.681729 0.05548836 1.5461e-05 9.9512e-01 weaklyHypermeth 2.6657e-04 1.0000e+00 weaklyHypermeth 1.3630e-03 9.9886e-01 weaklyHypermeth 2.7816e-02 1.00000000 weaklyHypermeth 0.0652208 2.1413e-02 weaklyHypermeth 3.8933e-01 insignificant 0.7686527 0.828571 -0.04277604 12 0.742644 0.793422 -0.05077814 9.9591e-01 7.0801e-03 weaklyHypometh 1.0000e+00 5.9001e-01 insignificant 9.9338e-01 7.2399e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.05455659 5.9510e-02 insignificant 1.0000e+00 insignificant 0.7792969 0.6992032 0.0818992 11 0.762587 0.681729 0.0808582 4.0605e-06 9.9962e-01 weaklyHypermeth 9.6678e-05 1.000000 weaklyHypermeth 5.0613e-06 0.99999514 weaklyHypermeth 3.1633e-04 1.00000 weaklyHypermeth 0.1099724 2.2667e-03 weaklyHypermeth 9.0468e-02 weaklyHypermeth 0.7797357 0.828571 -0.0239381 11 0.77509 0.793422 -0.0183286 9.6115e-01 1.5370e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.1614e-01 6.6762e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00980502 7.5272e-01 insignificant 1.0000e+00 insignificant 0.698603 0.828571 -0.1075322 11 0.657246 0.793422 -0.1361759 1.0000e+00 9.4023e-07 weaklyHypometh 1.0000e+00 3.4823e-05 weaklyHypometh 1.0000e+00 1.6747e-05 weaklyHypometh 1.0000000 1.1165e-03 weaklyHypometh -0.1197774 0.00272988 weaklyHypometh 0.124085 insignificant chr9 37588450 37589450 32806 TOMM5 ENSG00000175768 0.714280 314 11 0.766318 147 11 0.639543 196 11 0.74187 300 11 0.7834055 80 11 0.7707995 391 11 0.6323967 114 7 0.693315 184 11 0.580152 135 7 0.7074315 117 11 0.794863 267 11 0.565245 88 6 0.8102928 135 11 0.68813 71 6 0.734445 133 7 0.6300748 72 6 0.5585470 108 6 0.834583 269 11 0.7594379 210 11 0.7916781 306 11 0.684258 102 11 0.763944 125 10 0.76769 223 11 0.6255291 80 7 0.84907 59 6 0.700784 200 11 0.700505 84 6 0.841342 76 7 0.699361 124 10 0.770704 240 11 0.736364 215 11 0.7966573 357 11 0.610422 132 11 0.605502 154 11 0.686984 174 11 0.924651 105 6 0.694872 106 6 0.6931911 292 11 0.835593 263 11 0.82489 324 11 0.849011 262 11 0.826347 315 11 0.827378 330 11 0.814986 0.8262632 0.718966 0.828126 0.769689 0.791124 0.6747080 0.739557 0.6663600 0.7812568 0.8108212 0.624893 0.8168114 0.75872 0.740739 0.684121 0.6710804 0.8615004 0.7742404 0.8091688 0.689375 0.79793746 0.793752 0.7634134 0.844884 0.739764 0.777709 0.858952 0.789429 0.7985366 0.746766 0.8167413 0.673295 0.654487 0.7414245 0.897986 0.703808 0.7133221 0.837489 0.848854 0.85407 0.863034 0.8609045 6 0.7661801 0.7787798 -0.00817725 11 0.682721 0.72382 -0.04110101 0.774191 0.18064688 insignificant 1 1.00000 insignificant 0.91474814 0.032850 weaklyHypometh 1.00000 1 insignificant -0.0348429 0.2051043 insignificant 1 insignificant 0.7676349 0.7123572 0.05966511 11 0.754841 0.712282 0.04255893 1.8976e-03 9.9951e-01 weaklyHypermeth 2.2325e-02 1.0000e+00 weaklyHypermeth 1.9210e-01 9.4451e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0072368 8.9152e-01 insignificant 1.0000e+00 insignificant 0.7668137 0.841365 -0.07594756 11 0.754469 0.853138 -0.09866915 1.0000e+00 1.3652e-03 weaklyHypometh 1.0000e+00 1.9503e-01 insignificant 1.0000e+00 3.9589e-05 weaklyHypometh 1.0000e+00 1.9794e-02 weaklyHypometh -0.12280276 2.7848e-06 weaklyHypometh 6.9619e-04 weaklyHypometh 0.7793177 0.7123572 0.0661567 11 0.731959 0.712282 0.0196768 2.3516e-04 9.7907e-01 weaklyHypermeth 3.5630e-03 1.000000 weaklyHypermeth 4.5394e-02 0.97708562 weaklyHypermeth 4.8811e-01 1.00000 insignificant 0.0420798 4.3943e-01 insignificant 1.0000e+00 insignificant 0.7798507 0.841259 -0.0650352 11 0.74863 0.840899 -0.0922737 9.9979e-01 1.3123e-03 weaklyHypometh 1.0000e+00 2.6247e-01 insignificant 9.9807e-01 1.0027e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.08795981 7.3927e-04 weaklyHypometh 9.2409e-02 weaklyHypometh 0.712058 0.841153 -0.1309170 11 0.686126 0.826436 -0.1403097 1.0000e+00 1.9351e-07 weaklyHypometh 1.0000e+00 8.4136e-06 weaklyHypometh 1.0000e+00 2.1199e-05 weaklyHypometh 1.0000000 1.2470e-03 weaklyHypometh -0.1300396 0.04067435 weaklyHypometh 0.621720 insignificant chr9 38661850 38662850 32848 ENSG00000217979 0.252613 400 10 0.038987 533 9 0.201054 448 9 0.20679 251 8 0.0552465 282 9 0.1131031 440 10 0.0785050 455 9 0.057629 363 9 0.079311 499 9 0.0397360 328 9 0.277999 447 9 0.073151 276 9 0.0429313 380 9 0.19444 36 2 0.050836 470 9 0.0707890 373 9 0.0405456 391 8 0.215805 187 6 0.0384707 263 8 0.0897446 369 10 0.107023 132 9 0.078728 121 5 0.26246 362 9 0.0488445 147 9 0.14286 75 5 0.056793 579 12 0.061187 166 9 0.051455 81 8 0.093630 273 8 0.055401 608 12 0.064569 595 12 0.0809605 444 10 0.065913 395 9 0.150194 313 9 0.008642 404 9 0.040238 195 10 0.269517 179 9 0.0322581 565 10 0.316973 438 14 0.29496 469 11 0.276562 317 11 0.316733 277 7 0.302206 392 11 0.098844 0.0276934 0.063771 0.095325 0.042821 0.073683 0.0702572 0.057017 0.0721146 0.0406748 0.1213688 0.077225 0.0390586 NA 0.043176 0.054325 0.0468964 0.1158289 0.0461336 0.0420557 0.121089 0.04953816 0.073914 0.0820872 0.024832 0.035937 0.054286 0.050966 0.060766 0.0693478 0.055407 0.0562211 0.032020 0.085909 0.0220862 0.062867 0.236596 0.0087977 0.170263 0.261881 0.17291 0.088316 0.1510737 6 0.0704049 0.0700530 0.00470986 9 0.178571 0.15353 0.02503729 0.061472 0.94514120 insignificant 1 1.00000 insignificant 0.03064614 0.992846 weaklyHypermeth 1.00000 1 insignificant 0.0188922 0.4569729 insignificant 1 insignificant 0.0690762 0.0755729 0.00390663 9 0.121212 0.072848 0.04836349 1.2833e-02 3.2787e-01 weaklyHypermeth 1.3095e-01 1.0000e+00 insignificant 3.0219e-02 7.1181e-01 weaklyHypermeth 3.6408e-01 1.00000000 insignificant 0.0164242 7.2073e-01 insignificant 1.0000e+00 insignificant 0.0704049 0.223455 -0.13136546 8 0.178571 0.304091 -0.12552000 9.6813e-01 7.0773e-27 weaklyHypometh 1.0000e+00 7.0773e-24 weaklyHypometh 9.9576e-01 1.8235e-11 weaklyHypometh 1.0000e+00 1.8235e-08 weaklyHypometh -0.19060182 1.2691e-09 weaklyHypometh 1.2691e-06 weaklyHypometh 0.0690523 0.0755729 -0.0014223 9 0.068012 0.072848 -0.0048366 5.0659e-01 5.2527e-01 insignificant 1.0000e+00 1.000000 insignificant 6.9913e-01 0.67709007 insignificant 1.0000e+00 1.00000 insignificant -0.0024680 9.5676e-01 insignificant 1.0000e+00 insignificant 0.0700530 0.223455 -0.1471657 8 0.15353 0.304091 -0.1505573 1.0000e+00 4.8193e-21 weaklyHypometh 1.0000e+00 4.8193e-18 weaklyHypometh 1.0000e+00 6.5076e-11 weaklyHypometh 1.0000e+00 6.5076e-08 weaklyHypometh -0.20949398 2.4126e-08 hypomethylated 2.4126e-05 hypomethylated 0.075573 0.215434 -0.1448562 9 0.072848 0.225194 -0.1523459 1.0000e+00 5.0280e-09 weaklyHypometh 1.0000e+00 2.9576e-07 weaklyHypometh 1.0000e+00 9.0459e-06 weaklyHypometh 1.0000000 6.9804e-04 weaklyHypometh -0.2070260 0.00325602 weaklyHypometh 0.135668 insignificant chr9 39010350 39011350 32862 ENSG00000210820 0.838251 452 6 0.752925 128 6 0.856227 81 6 0.92708 119 6 0.8839286 68 6 0.8665713 213 6 0.8962963 87 6 0.848227 78 6 0.851036 76 6 0.8893939 60 6 0.837918 148 6 0.906944 37 3 0.9046627 146 6 NA 0 0 0.854928 100 6 0.7791667 55 6 0.9125000 86 6 0.898747 178 6 0.8221210 114 6 0.8193841 236 6 0.771429 44 5 0.805259 100 6 0.91069 153 6 0.8449463 84 6 0.88519 72 6 0.877359 108 6 0.888533 170 6 0.835634 90 6 0.860276 111 6 0.919738 148 6 0.815295 127 6 0.8341515 260 6 0.756626 110 6 0.800629 109 6 0.781111 81 3 0.772727 48 6 0.788396 107 6 0.8363371 153 6 0.852932 353 6 0.87340 335 6 0.897669 219 6 0.874693 241 6 0.889322 236 6 0.860167 0.7638105 0.891042 0.938315 0.913121 0.880350 0.9041304 0.869634 0.8644409 0.9036759 0.8450197 0.917391 0.9156936 NA 0.879471 0.823865 0.9267391 0.9190169 0.8580713 0.8474119 0.798354 0.84316381 0.922312 0.8593838 0.898068 0.894751 0.890152 0.840245 0.877872 0.9344264 0.858394 0.8532615 0.775533 0.785961 0.8154783 0.804190 0.798234 0.8461618 0.874557 0.897861 0.90842 0.890753 0.9039273 6 0.8736799 0.8698023 -0.00215272 6 0.852318 0.85606 -0.00374522 0.693263 0.53686063 insignificant 1 1.00000 insignificant 0.21591523 0.572055 insignificant 1.00000 1 insignificant 0.0062913 0.7084022 insignificant 1 insignificant 0.8736799 0.7993421 0.06928931 6 0.852318 0.790952 0.06136583 1.7298e-06 9.9401e-01 weaklyHypermeth 3.4596e-05 1.0000e+00 weaklyHypermeth 1.6657e-03 9.8290e-01 weaklyHypermeth 3.2033e-02 1.00000000 weaklyHypermeth 0.0710278 3.5422e-04 weaklyHypermeth 1.6868e-02 weaklyHypermeth 0.8736799 0.903902 -0.02085910 6 0.852318 0.873813 -0.02149529 8.9219e-01 1.0179e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.9852e-01 3.3198e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01727077 2.0132e-01 insignificant 1.0000e+00 insignificant 0.8698023 0.7993421 0.0714219 6 0.856063 0.790952 0.0651110 5.3611e-05 9.9873e-01 weaklyHypermeth 8.9352e-04 1.000000 weaklyHypermeth 1.5761e-02 0.99461270 weaklyHypermeth 2.1145e-01 1.00000 insignificant 0.0647365 1.7370e-03 weaklyHypermeth 7.5522e-02 weaklyHypermeth 0.8698023 0.903902 -0.0183557 6 0.85606 0.873813 -0.0177501 9.5659e-01 1.2854e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.8412e-01 3.1849e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02356207 1.3612e-01 insignificant 1.0000e+00 insignificant 0.799342 0.903902 -0.0901448 6 0.790952 0.873813 -0.0828611 9.9982e-01 8.9893e-05 weaklyHypometh 1.0000e+00 2.0905e-03 weaklyHypometh 9.9940e-01 5.0803e-03 weaklyHypometh 1.0000000 1.1061e-01 insignificant -0.0882986 0.00014437 weaklyHypometh 0.019379 weaklyHypometh chr9 39068650 39069650 32868 ENSG00000210820 0.052334 566 19 0.238397 297 15 0.359226 308 19 0.15833 530 13 0.1165550 218 19 0.0490288 741 19 0.1432915 371 19 0.094415 362 18 0.162465 516 19 0.0545482 791 18 0.013165 323 19 0.082626 588 19 0.2717012 481 19 0.12392 237 9 0.257963 581 13 0.0793955 525 19 0.0057185 940 19 0.054538 526 13 0.3893232 222 19 0.3503172 369 19 0.034373 106 6 0.110382 335 13 0.16246 380 19 0.0617379 217 15 0.37774 218 9 0.178095 424 19 0.072133 249 15 0.155388 172 11 0.076438 356 19 0.317346 384 19 0.049766 382 19 0.0178034 435 19 0.028652 497 19 0.047945 315 18 0.066667 236 5 0.057084 132 14 0.022436 228 12 0.0358092 318 19 0.164056 745 19 0.15791 648 19 0.278512 516 13 0.418177 490 19 0.097866 576 19 0.082002 0.2161009 0.286274 0.260209 0.132395 0.022458 0.2193686 0.092838 0.1964086 0.0532085 0.0133240 0.041319 0.3150912 0.12789 0.258247 0.105647 0.0063353 0.0908077 0.3809800 0.3066067 0.077592 0.03734571 0.166525 0.1130674 0.323275 0.198031 0.078349 0.114842 0.054132 0.3362522 0.060283 0.0155347 0.029069 0.050195 0.0012667 0.078048 0.018826 0.0329601 0.174260 0.212033 0.33279 0.442687 0.0833736 9 0.1374842 0.1366867 0.00172443 19 0.128177 0.13137 -0.00319199 0.951933 0.94451135 insignificant 1 1.00000 insignificant 0.52584785 0.999534 insignificant 1.00000 1 insignificant 0.0183911 0.6651695 insignificant 1 insignificant 0.1376873 0.0312862 0.10464653 19 0.139323 0.048009 0.09131448 8.6285e-09 1.0000e+00 weaklyHypermeth 2.7834e-07 1.0000e+00 weaklyHypermeth 1.4912e-12 1.0000e+00 weaklyHypermeth 3.7281e-10 1.00000000 weaklyHypermeth 0.1097640 6.3198e-04 weaklyHypermeth 2.8726e-02 weaklyHypermeth 0.1377599 0.233277 -0.09312113 19 0.145656 0.197154 -0.05149765 9.9996e-01 4.9063e-04 weaklyHypometh 1.0000e+00 1.0890e-01 insignificant 9.9999e-01 1.9397e-03 weaklyHypometh 1.0000e+00 3.2329e-01 insignificant -0.07044085 3.0503e-01 insignificant 1.0000e+00 insignificant 0.1365880 0.0312862 0.1044971 19 0.130371 0.048009 0.0823617 3.9767e-10 1.0000e+00 weaklyHypermeth 1.8654e-08 1.000000 weaklyHypermeth 4.1745e-08 1.00000000 weaklyHypermeth 5.2181e-06 1.00000 weaklyHypermeth 0.0913730 1.7744e-02 weaklyHypermeth 3.4792e-01 insignificant 0.1367005 0.233277 -0.0872493 19 0.13630 0.197154 -0.0608574 9.9997e-01 5.4773e-04 weaklyHypometh 1.0000e+00 1.8258e-01 insignificant 1.0000e+00 1.0639e-04 weaklyHypometh 1.0000e+00 3.5465e-02 weaklyHypometh -0.08883192 2.1818e-01 insignificant 1.0000e+00 insignificant 0.031323 0.233277 -0.1885236 19 0.050191 0.197154 -0.1469628 1.0000e+00 3.3889e-21 weaklyHypometh 1.0000e+00 3.3889e-18 weaklyHypometh 1.0000e+00 4.7674e-15 weaklyHypometh 1.0000000 4.7674e-12 weaklyHypometh -0.1802049 0.03317254 weaklyHypometh 0.571940 insignificant chr9 44690381 44691381 32911 ENSG00000218420 0.901692 76 5 0.773021 117 5 0.722619 35 5 0.93301 100 5 0.9305556 34 3 0.7485164 188 5 0.8500000 17 0 0.877802 61 5 0.900000 31 3 0.8170940 39 3 0.933452 147 5 NA 0 0 0.9555556 66 5 0.92727 51 5 0.941667 34 5 1.0000000 5 0 NA 0 0 0.802083 71 5 0.8788809 146 5 0.8501304 163 5 0.793981 49 5 0.899389 77 5 0.89118 76 5 0.9333333 37 5 0.93556 47 5 0.938704 85 5 0.869703 76 5 0.716667 17 0 0.855952 172 5 0.933918 73 5 0.909290 162 5 0.9274603 144 5 0.581470 180 5 0.520000 41 3 0.507622 215 5 0.733333 12 0 0.611190 84 5 0.7452552 162 5 0.771825 66 5 0.89462 111 5 0.831439 71 5 0.948485 41 3 0.791667 47 5 0.902658 0.7730129 0.722789 0.933400 0.930916 0.897295 0.8506494 0.876895 0.8993506 0.7808025 0.9342482 NA 0.9567100 0.92680 0.943182 1.000000 NA 0.9618506 0.8781940 0.8505410 0.952561 0.89891061 0.892475 0.9350649 0.935786 0.939613 0.869841 0.714286 0.856401 0.9334700 0.909701 0.9275407 0.582983 0.518089 0.5104941 0.740260 0.611626 0.7474502 0.767651 0.893218 0.83203 0.948642 0.9512987 0 0.8905797 0.9044335 -0.01429701 5 0.742800 0.75103 -0.00823484 0.867480 0.19075744 insignificant 1 1.00000 insignificant 0.89780020 0.323841 insignificant 1.00000 1 insignificant -0.0091302 0.7345481 lowCoverage 1 lowCoverage 0.8918723 0.5691643 0.31417224 5 0.891360 0.589360 0.30199991 1.6401e-21 1.0000e+00 hypermethylated 1.2616e-19 1.0000e+00 hypermethylated 9.1950e-09 1.0000e+00 hypermethylated 8.3591e-07 1.00000000 hypermethylated 0.2581523 7.8179e-04 lowCoverage 3.3991e-02 lowCoverage 0.8905797 0.877976 0.01230817 5 0.742800 0.722443 0.02035719 3.6188e-01 8.0866e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.0231e-01 8.3093e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02702279 4.9519e-01 lowCoverage 1.0000e+00 lowCoverage 0.9053254 0.5691643 0.3230681 5 0.901242 0.589360 0.3118817 4.8513e-18 1.0000e+00 hypermethylated 5.3903e-16 1.000000 hypermethylated 6.0069e-08 0.99999983 hypermethylated 6.6744e-06 1.00000 hypermethylated 0.2672825 5.9227e-04 lowCoverage 3.1172e-02 lowCoverage 0.9044335 0.877976 0.0286865 5 0.75103 0.722443 0.0285920 1.4381e-01 9.5821e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.5217e-01 9.6810e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03615297 3.7523e-01 lowCoverage 1.0000e+00 lowCoverage 0.569164 0.880597 -0.3117894 5 0.589360 0.866931 -0.2775713 9.9933e-01 3.2169e-08 hypomethylated 1.0000e+00 1.6085e-06 hypomethylated 9.9991e-01 1.8903e-05 hypomethylated 1.0000000 1.1815e-03 hypomethylated -0.2311295 0.00194137 lowCoverage 0.097068 lowCoverage chr9 45338676 45339684 32916 ENSG00000219974 0.782203 202 6 0.723454 126 6 0.644788 109 6 0.88633 129 6 0.8777778 56 6 0.8707967 269 6 0.6976716 83 6 0.754746 114 5 0.797360 88 6 0.7163278 89 5 0.808409 175 6 0.788228 41 5 0.7291423 110 6 0.62500 18 2 0.742712 97 6 0.6357143 25 2 0.7164469 49 3 0.854960 118 6 0.7945302 162 6 0.6114191 175 6 0.795455 55 5 0.755490 83 5 0.81347 139 6 0.6363095 48 5 0.86250 31 5 0.764284 129 6 0.845109 76 5 0.826118 57 5 0.705611 115 5 0.778478 173 6 0.708166 168 6 0.7601793 261 6 0.637021 99 6 0.712553 93 6 0.614731 147 6 0.714286 58 4 0.851852 56 5 0.8070445 191 6 0.782196 193 6 0.87121 213 6 0.763441 172 6 0.818549 219 6 0.851253 146 6 0.788062 0.7185256 0.627430 0.881577 0.843797 0.838999 0.7133610 0.777984 0.7449587 0.6828408 0.8186209 0.817929 0.8422366 0.84621 0.735343 0.585270 0.6611464 0.8170841 0.7957316 0.7457710 0.793453 0.73678489 0.823348 0.6708863 0.853627 0.753037 0.804127 0.770778 0.750365 0.7598134 0.822135 0.7237800 0.724009 0.730366 0.7279072 0.686528 0.830455 0.7911045 0.770731 0.871188 0.76447 0.787946 0.8562161 5 0.7834452 0.7602996 0.01070914 6 0.755078 0.76829 -0.01320880 0.280409 0.52582199 insignificant 1 1.00000 insignificant 0.52992278 0.126630 insignificant 1.00000 1 insignificant -0.0180298 0.5031216 insignificant 1 insignificant 0.7834452 0.7500000 0.02671233 6 0.755078 0.647556 0.10752164 8.1949e-02 9.6646e-01 insignificant 6.8865e-01 1.0000e+00 insignificant 1.5416e-01 8.7169e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0299863 4.9933e-01 insignificant 1.0000e+00 insignificant 0.7834452 0.850477 -0.03173178 6 0.755078 0.835862 -0.08078461 9.7302e-01 1.0976e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7636e-01 6.7054e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.06442962 3.8162e-02 weaklyHypometh 1.0000e+00 insignificant 0.7602996 0.7500000 0.0136985 6 0.768287 0.647556 0.1207304 8.2850e-02 8.2013e-01 insignificant 7.2044e-01 1.000000 insignificant 5.8378e-02 0.90861923 insignificant 5.8968e-01 1.00000 insignificant 0.0480161 2.9018e-01 insignificant 1.0000e+00 insignificant 0.7602996 0.850477 -0.0422270 6 0.76829 0.835862 -0.0675758 9.7349e-01 6.9314e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 7.7518e-01 2.3100e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04639983 1.2066e-01 insignificant 1.0000e+00 insignificant 0.750000 0.850477 -0.0549343 6 0.647556 0.835862 -0.1883062 9.9341e-01 1.0949e-02 weaklyHypometh 1.0000e+00 1.4037e-01 insignificant 9.6284e-01 8.8003e-03 weaklyHypometh 1.0000000 1.5715e-01 insignificant -0.0944160 0.06119303 insignificant 0.768802 insignificant chr9 45339110 45340110 32917 ENSG00000219974 0.827024 216 8 0.766418 141 9 0.738500 136 9 0.88719 138 6 0.8588889 83 9 0.8556183 328 9 0.7349556 104 9 0.836497 153 8 0.775501 97 6 0.7831074 101 5 0.846524 269 9 0.756270 60 8 0.7821815 127 9 0.76786 32 3 0.795627 116 9 0.7571429 46 5 0.7164469 49 3 0.878472 132 8 0.8630201 178 9 0.7544005 206 9 0.813636 69 7 0.753660 95 5 0.71519 153 6 0.7181548 56 5 0.89687 33 5 0.815078 165 9 0.734766 91 7 0.878283 63 5 0.803740 126 5 0.852319 208 9 0.779050 186 9 0.7300314 293 9 0.729248 117 9 0.808369 99 6 0.714522 204 9 0.809524 67 4 0.869444 76 8 0.8046963 220 9 0.799242 199 6 0.84933 223 6 0.820072 188 9 0.852487 226 6 0.767502 161 9 0.805363 0.7384549 0.667587 0.882560 0.839898 0.836470 0.7262977 0.807851 0.7120046 0.7142972 0.8257474 0.834949 0.8634603 0.84448 0.748526 0.641063 0.6905731 0.8327230 0.8232116 0.7587737 0.801060 0.73856271 0.820954 0.7151617 0.859767 0.775050 0.793109 0.801615 0.783948 0.7921255 0.838589 0.7478944 0.753664 0.766639 0.7574311 0.728700 0.834579 0.7923012 0.779152 0.862358 0.78719 0.816474 0.8217476 5 0.8012537 0.7776333 0.00776826 9 0.829397 0.71044 0.11895674 0.256505 0.79048439 insignificant 1 1.00000 insignificant 0.49801151 0.593974 insignificant 1.00000 1 insignificant 0.0081832 0.7088339 insignificant 1 insignificant 0.8012583 0.7777778 0.01840808 9 0.813172 0.750348 0.06282453 2.8765e-01 9.2005e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.6761e-01 7.7251e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0097813 7.2026e-01 insignificant 1.0000e+00 insignificant 0.8014053 0.847543 -0.02155859 6 0.828741 0.813397 0.01534467 7.7235e-01 5.7879e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.2954e-01 3.3022e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01864412 3.7126e-01 insignificant 1.0000e+00 insignificant 0.7785761 0.7777778 0.0118558 9 0.767833 0.750348 0.0174856 1.6791e-01 7.3736e-01 insignificant 1.0000e+00 1.000000 insignificant 2.2018e-01 0.76984538 insignificant 1.0000e+00 1.00000 insignificant 0.0015981 9.5807e-01 insignificant 1.0000e+00 insignificant 0.7790091 0.847543 -0.0295992 6 0.78718 0.813397 -0.0262160 6.5356e-01 3.9249e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.4241e-01 5.8817e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02682731 2.8613e-01 insignificant 1.0000e+00 insignificant 0.777778 0.847236 -0.0403889 6 0.750348 0.796433 -0.0460849 7.0370e-01 1.1761e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.1980e-01 9.0266e-02 insignificant 1.0000000 9.3058e-01 insignificant -0.0284254 0.34523078 insignificant 1.000000 insignificant chr9 45339210 45340210 32918 ENSG00000219974 0.827024 216 8 0.766418 141 9 0.738500 136 9 0.88719 138 6 0.8588889 83 9 0.8556183 328 9 0.7349556 104 9 0.836497 153 8 0.775501 97 6 0.7831074 101 5 0.846524 269 9 0.756270 60 8 0.7821815 127 9 0.76786 32 3 0.795627 116 9 0.7571429 46 5 0.7164469 49 3 0.878472 132 8 0.8630201 178 9 0.7544005 206 9 0.813636 69 7 0.753660 95 5 0.71519 153 6 0.7181548 56 5 0.89687 33 5 0.815078 165 9 0.734766 91 7 0.878283 63 5 0.803740 126 5 0.852319 208 9 0.779050 186 9 0.7300314 293 9 0.729248 117 9 0.808369 99 6 0.714522 204 9 0.809524 67 4 0.869444 76 8 0.8046963 220 9 0.799242 199 6 0.84933 223 6 0.820072 188 9 0.852487 226 6 0.767502 161 9 0.805363 0.7384549 0.667587 0.882560 0.839898 0.836470 0.7262977 0.807851 0.7120046 0.7142972 0.8257474 0.834949 0.8634603 0.84448 0.748526 0.641063 0.6905731 0.8327230 0.8232116 0.7587737 0.801060 0.73856271 0.820954 0.7151617 0.859767 0.775050 0.793109 0.801615 0.783948 0.7921255 0.838589 0.7478944 0.753664 0.766639 0.7574311 0.728700 0.834579 0.7923012 0.779152 0.862358 0.78719 0.816474 0.8217476 5 0.8012537 0.7776333 0.00776826 9 0.829397 0.71044 0.11895674 0.256505 0.79048439 insignificant 1 1.00000 insignificant 0.49801151 0.593974 insignificant 1.00000 1 insignificant 0.0081832 0.7088339 insignificant 1 insignificant 0.8012583 0.7777778 0.01840808 9 0.813172 0.750348 0.06282453 2.8765e-01 9.2005e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.6761e-01 7.7251e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0097813 7.2026e-01 insignificant 1.0000e+00 insignificant 0.8014053 0.847543 -0.02155859 6 0.828741 0.813397 0.01534467 7.7235e-01 5.7879e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.2954e-01 3.3022e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01864412 3.7126e-01 insignificant 1.0000e+00 insignificant 0.7785761 0.7777778 0.0118558 9 0.767833 0.750348 0.0174856 1.6791e-01 7.3736e-01 insignificant 1.0000e+00 1.000000 insignificant 2.2018e-01 0.76984538 insignificant 1.0000e+00 1.00000 insignificant 0.0015981 9.5807e-01 insignificant 1.0000e+00 insignificant 0.7790091 0.847543 -0.0295992 6 0.78718 0.813397 -0.0262160 6.5356e-01 3.9249e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.4241e-01 5.8817e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02682731 2.8613e-01 insignificant 1.0000e+00 insignificant 0.777778 0.847236 -0.0403889 6 0.750348 0.796433 -0.0460849 7.0370e-01 1.1761e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.1980e-01 9.0266e-02 insignificant 1.0000000 9.3058e-01 insignificant -0.0284254 0.34523078 insignificant 1.000000 insignificant chr9 47069661 47070661 32937 ENSG00000220568 0.819630 93 5 0.718427 83 5 0.650926 59 4 0.76012 131 5 0.7333333 28 3 0.8029355 121 6 0.6500000 35 3 0.751190 83 5 0.533333 45 5 0.8533333 22 3 0.767638 135 5 0.600000 16 0 0.8076190 59 5 0.90000 24 3 0.763558 38 5 0.1666667 6 0 0.4666667 9 0 0.737351 94 5 0.7766667 69 5 0.6136395 132 6 0.870000 16 2 0.743810 31 5 0.70208 57 4 0.7339394 49 5 0.79242 47 5 0.729356 131 5 0.864918 46 5 0.633333 14 0 0.705303 49 5 0.815957 87 5 0.699394 100 5 0.4652663 156 5 0.676190 56 5 0.613333 47 5 0.759123 76 5 0.000000 2 0 0.833333 36 4 0.8056250 96 5 0.766667 66 5 0.79131 86 6 0.758715 85 5 0.743434 69 5 0.762963 88 5 0.775245 0.6346125 0.584854 0.679009 0.748016 0.723373 0.5404762 0.697364 0.5423280 0.8587302 0.7615529 0.571429 0.8137188 0.87897 0.652140 0.327966 0.3019493 0.7456774 0.7561508 0.6855021 0.840476 0.76678005 0.636458 0.7305195 0.782197 0.678765 0.836108 0.625000 0.651921 0.7551438 0.600476 0.6254472 0.590816 0.594048 0.7435986 0.480216 0.795635 0.6973214 0.751984 0.728225 0.68336 0.652381 0.7105820 0 0.7074883 0.6832695 0.02067649 5 0.691694 0.60149 0.09020624 0.124636 0.94040258 insignificant 1 1.00000 insignificant 0.71401298 0.763998 insignificant 1.00000 1 insignificant -0.0359971 0.4626235 lowCoverage 1 lowCoverage 0.7074883 0.6869010 0.01689741 5 0.691694 0.807498 -0.11580375 8.3498e-01 9.0681e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.8322e-01 7.7867e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0790508 5.7326e-01 lowCoverage 1.0000e+00 lowCoverage 0.7069914 0.728426 -0.00416174 5 0.755592 0.772116 -0.01652405 6.2885e-01 1.1656e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.0340e-01 3.0695e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.07096621 7.2683e-02 lowCoverage 1.0000e+00 lowCoverage 0.6832695 0.6869010 -0.0041002 5 0.601488 0.807498 -0.2060100 7.7480e-01 6.8684e-01 insignificant 1.0000e+00 1.000000 insignificant 6.8937e-01 0.88423333 insignificant 1.0000e+00 1.00000 insignificant 0.1150479 4.1650e-01 lowCoverage 1.0000e+00 lowCoverage 0.6846154 0.728426 -0.0239256 5 0.71865 0.772116 -0.0534657 8.0892e-01 1.2035e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.2384e-01 4.3255e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03496914 3.0195e-01 lowCoverage 1.0000e+00 lowCoverage 0.684887 0.728426 -0.0206517 5 0.743331 0.772116 -0.0287857 8.6988e-01 1.3820e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.6602e-01 2.3341e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.1500170 0.29232755 lowCoverage 1.000000 lowCoverage chr9 65396450 65397454 32939 ENSG00000204798 0.069952 513 13 0.338950 316 19 0.137562 324 20 0.21438 482 13 0.1066103 194 16 0.0092056 641 20 0.1107318 461 20 0.116834 404 20 0.196195 506 20 0.0784010 786 20 0.073029 263 20 0.034485 598 20 0.1249817 585 20 0.12666 235 9 0.308672 504 13 0.0373226 366 20 0.0219679 1058 20 0.046589 515 13 0.3210192 280 20 0.3248882 417 20 0.031818 95 8 0.065108 317 13 0.11865 444 20 0.0069444 184 9 0.25165 280 12 0.099615 403 19 0.106017 287 21 0.028316 184 9 0.129553 311 20 0.148644 522 20 0.065787 461 20 0.0707652 431 20 0.020188 393 20 0.012143 308 20 0.000000 254 5 0.043148 188 12 0.067430 230 10 0.0786367 410 20 0.101587 811 20 0.23519 705 20 0.365784 585 13 0.361484 479 20 0.035899 614 20 0.097747 0.2483269 0.183796 0.252483 0.206266 0.012160 0.1459179 0.050568 0.2398325 0.0627851 0.0936949 0.054275 0.1885280 0.12655 0.267726 0.059081 0.0142751 0.0902924 0.2955760 0.3057187 0.012626 0.10522603 0.130474 0.0094697 0.159947 0.197946 0.110067 0.043814 0.110507 0.2102142 0.040789 0.0775932 0.018520 0.010317 0.0030294 0.047887 0.050325 0.0504169 0.128494 0.190506 0.34260 0.407826 0.0661637 9 0.1324090 0.1145700 0.01644736 20 0.133131 0.10312 0.03001422 0.062800 0.99973046 insignificant 1 1.00000 insignificant 0.00016361 0.999963 weaklyHypermeth 0.16361 1 insignificant 0.0463489 0.1419732 insignificant 1 insignificant 0.1324090 0.0286035 0.10333700 20 0.133131 0.046554 0.08657681 6.4461e-11 1.0000e+00 weaklyHypermeth 3.0696e-09 1.0000e+00 weaklyHypermeth 6.3211e-14 1.0000e+00 weaklyHypermeth 2.1070e-11 1.00000000 weaklyHypermeth 0.1029975 9.4933e-04 weaklyHypermeth 3.7973e-02 weaklyHypermeth 0.1324090 0.217909 -0.08653122 20 0.133131 0.225293 -0.09216177 1.0000e+00 2.2632e-05 weaklyHypometh 1.0000e+00 1.1316e-02 weaklyHypometh 1.0000e+00 2.8681e-03 weaklyHypometh 1.0000e+00 4.0974e-01 insignificant -0.08006773 3.1028e-01 insignificant 1.0000e+00 insignificant 0.1145700 0.0286035 0.0881134 20 0.103117 0.046554 0.0565626 2.6695e-11 1.0000e+00 weaklyHypermeth 1.3347e-09 1.000000 weaklyHypermeth 1.2789e-05 0.99999795 weaklyHypermeth 6.5116e-04 1.00000 weaklyHypermeth 0.0566486 2.5360e-02 weaklyHypermeth 4.3896e-01 insignificant 0.1145700 0.217909 -0.1021159 20 0.10312 0.225293 -0.1221760 1.0000e+00 2.5553e-09 weaklyHypometh 1.0000e+00 1.2777e-06 weaklyHypometh 1.0000e+00 1.0484e-07 weaklyHypometh 1.0000e+00 5.2420e-05 weaklyHypometh -0.12641663 1.3288e-01 insignificant 1.0000e+00 insignificant 0.028603 0.217909 -0.1892389 20 0.046554 0.225293 -0.1787386 1.0000e+00 4.1299e-17 weaklyHypometh 1.0000e+00 8.2598e-15 weaklyHypometh 1.0000e+00 6.8175e-13 weaklyHypometh 1.0000000 3.4088e-10 weaklyHypometh -0.1830652 0.05075725 insignificant 0.691969 insignificant chr9 65452860 65453853 32941 ENSG00000218692 0.713724 110 5 0.800833 67 5 0.662088 56 5 0.93700 63 5 0.8500000 44 3 0.8911046 120 5 0.7356140 83 5 0.710000 40 4 0.872402 64 5 0.8686499 65 3 0.921429 70 3 0.706266 64 3 0.8222371 92 5 NA 0 0 0.858824 57 3 0.7436364 41 5 0.8226190 38 5 0.895663 95 5 0.6899351 85 5 0.8262503 123 5 0.840000 37 4 0.946970 41 3 0.86531 120 5 0.7539683 34 4 0.63333 17 0 0.846853 91 5 0.801429 63 5 0.775556 44 5 0.849129 87 5 0.895026 105 5 0.890386 81 5 0.8771447 133 5 0.838596 63 3 0.676923 50 5 0.548667 95 5 0.702500 71 5 0.793504 56 5 0.8676435 128 5 0.935000 155 5 0.89000 133 5 0.790291 110 5 0.934355 139 5 0.931818 126 5 0.700773 0.8139864 0.726431 0.940085 0.790448 0.847399 0.8360679 0.704094 0.8225906 0.8172013 0.8865219 0.727125 0.8062123 NA 0.800482 0.679585 0.7504177 0.8870508 0.7686324 0.7870443 0.783626 0.92778664 0.848935 0.7656177 0.552144 0.803480 0.768797 0.821313 0.847354 0.8548838 0.871585 0.8689312 0.773777 0.687509 0.5962476 0.647904 0.776858 0.8148505 0.910819 0.859174 0.75212 0.920033 0.9225716 3 0.8046478 0.8417351 -0.03807975 5 0.808773 0.85036 -0.04158384 0.958608 0.01417003 weaklyHypometh 1 1.00000 insignificant 0.87494885 0.080078 insignificant 1.00000 1 insignificant -0.0245080 0.4323691 lowCoverage 1 lowCoverage 0.8046478 0.7235421 0.07885203 5 0.808773 0.732896 0.07587711 1.9366e-03 9.9905e-01 weaklyHypermeth 2.2518e-02 1.0000e+00 weaklyHypermeth 6.2119e-03 9.9824e-01 weaklyHypermeth 9.5567e-02 1.00000000 weaklyHypermeth 0.0687788 2.3231e-01 lowCoverage 1.0000e+00 lowCoverage 0.8046478 0.898944 -0.08597320 5 0.808773 0.901069 -0.09229559 9.9991e-01 2.9560e-03 weaklyHypometh 1.0000e+00 2.7340e-01 insignificant 9.9901e-01 2.8093e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.08954186 2.8622e-02 lowCoverage 1.0000e+00 lowCoverage 0.8417351 0.7235421 0.1172753 5 0.850357 0.732896 0.1174610 5.8998e-06 9.9998e-01 weaklyHypermeth 1.3409e-04 1.000000 weaklyHypermeth 4.5489e-03 0.99930971 weaklyHypermeth 7.9402e-02 1.00000 weaklyHypermeth 0.0932868 1.2538e-01 lowCoverage 1.0000e+00 lowCoverage 0.8417351 0.898944 -0.0467184 5 0.85036 0.901069 -0.0507117 9.9369e-01 5.7516e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8655e-01 1.0846e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.06503382 1.0547e-01 lowCoverage 1.0000e+00 lowCoverage 0.723542 0.898944 -0.1635147 5 0.732896 0.901069 -0.1681727 1.0000e+00 1.0551e-05 weaklyHypometh 1.0000e+00 3.7683e-04 weaklyHypometh 9.9999e-01 2.9014e-04 weaklyHypometh 1.0000000 1.2615e-02 weaklyHypometh -0.1583206 0.02290249 lowCoverage 0.467398 lowCoverage chr9 66692628 66693628 32943 ENSG00000217755 0.732258 337 7 0.754458 210 7 0.661139 151 7 0.80729 257 7 0.7439893 70 7 0.6764904 493 7 0.6667362 108 7 0.775582 137 7 0.588999 123 7 0.5994898 102 5 0.680659 222 7 0.583464 58 6 0.7135314 178 7 0.85714 17 1 0.693350 160 7 0.6347985 31 3 0.5566327 93 5 0.633475 317 7 0.7660551 139 7 0.6465491 376 7 0.763377 97 7 0.597730 182 7 0.64274 180 8 0.5900849 102 7 0.67916 149 7 0.641358 241 7 0.585326 179 7 0.701775 69 6 0.640909 140 7 0.719148 225 7 0.672068 206 7 0.6543449 428 7 0.619172 205 7 0.398674 191 7 0.486119 148 5 0.511657 97 7 0.402127 92 7 0.5323434 223 7 0.714485 431 7 0.77363 418 7 0.583428 373 7 0.617263 425 7 0.688940 437 7 0.801203 0.7912915 0.716524 0.851043 0.821365 0.723551 0.7264600 0.806868 0.7166805 0.7453988 0.7670504 0.695454 0.7866101 0.74942 0.771248 0.597936 0.7010225 0.7311705 0.8020977 0.7453592 0.807245 0.65803682 0.768942 0.7342129 0.764706 0.749130 0.758907 0.762452 0.777513 0.7721485 0.763276 0.7504302 0.604914 0.507608 0.5274035 0.585293 0.545156 0.5850812 0.722367 0.785463 0.70799 0.746298 0.7662259 5 0.7599888 0.7429481 0.00529716 7 0.734059 0.68030 0.05376097 0.168069 0.93600216 insignificant 1 1.00000 insignificant 0.55847811 0.939658 insignificant 1.00000 1 insignificant 0.0312690 0.1966052 insignificant 1 insignificant 0.7599217 0.5407950 0.22105763 7 0.700816 0.493241 0.20757458 1.3765e-19 1.0000e+00 hypermethylated 9.1767e-18 1.0000e+00 hypermethylated 1.7700e-09 1.0000e+00 hypermethylated 2.2125e-07 1.00000000 hypermethylated 0.1969222 9.3666e-04 weaklyHypermeth 3.7973e-02 weaklyHypermeth 0.7599217 0.749520 0.01489522 7 0.700816 0.696489 0.00432686 3.2027e-01 6.2049e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.8664e-01 6.9566e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01305577 7.4515e-01 insignificant 1.0000e+00 insignificant 0.7428311 0.5407950 0.2150576 7 0.640335 0.493241 0.1470935 8.4559e-13 9.9945e-01 hypermethylated 4.6977e-11 1.000000 hypermethylated 3.8041e-08 0.99971109 hypermethylated 5.2181e-06 1.00000 hypermethylated 0.1656532 2.9571e-03 weaklyHypermeth 1.0141e-01 insignificant 0.7428311 0.749520 0.0090259 7 0.64033 0.696489 -0.0561542 4.3045e-01 1.2960e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.7353e-01 5.0334e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01821325 6.4449e-01 insignificant 1.0000e+00 insignificant 0.540795 0.749520 -0.2040816 7 0.493241 0.696489 -0.2032477 1.0000e+00 2.9654e-09 hypomethylated 1.0000e+00 2.1181e-07 hypomethylated 9.9997e-01 2.2757e-06 hypomethylated 1.0000000 3.2509e-04 hypomethylated -0.1838665 0.00423264 weaklyHypometh 0.148210 insignificant chr9 66757828 66758828 32944 ENSG00000218532 0.968282 88 5 0.560660 135 5 0.639929 51 5 0.88675 95 5 0.6854126 51 3 0.8797024 139 5 0.9142857 62 5 0.922222 66 5 0.600000 27 3 0.9398148 28 3 0.935366 141 5 0.555556 7 0 0.7581019 55 3 0.61181 43 3 0.772851 45 3 0.3500000 12 2 0.6666667 6 0 0.497671 89 4 0.9777778 29 3 0.8759259 82 3 0.900000 13 0 0.777778 9 0 0.86481 42 5 0.8214286 27 3 0.78995 44 5 0.750341 80 5 0.854167 21 1 0.850000 22 3 0.778499 42 5 0.695869 81 5 0.813533 90 5 0.8506667 75 5 0.157128 123 6 0.498810 28 3 0.433333 36 3 0.253968 19 3 0.365438 105 5 0.2071429 79 5 0.543305 66 5 0.74414 134 5 0.786128 91 5 0.715556 35 5 0.605636 101 5 0.953135 0.7134272 0.570143 0.890064 0.792383 0.860066 0.8600000 0.937847 0.8000000 0.9125000 0.9358232 0.802442 0.8406250 0.68792 0.836991 0.769108 0.6161340 0.6197464 0.9833333 0.9104167 0.937500 0.82079890 0.865936 0.8035714 0.750368 0.745942 0.843750 0.970000 0.797186 0.7455128 0.864273 0.8806667 0.194364 0.550298 0.2841024 0.318626 0.281806 0.2017857 0.555280 0.739114 0.84833 0.763056 0.5913849 0 0.8248000 0.8131868 0.00665098 5 0.709642 0.75187 -0.04222960 0.782748 0.38504644 insignificant 1 1.00000 insignificant 0.92380444 0.605186 insignificant 1.00000 1 insignificant -0.0623144 0.1712495 lowCoverage 1 lowCoverage 0.8246597 0.2384615 0.57594286 5 0.673347 0.322255 0.35109196 9.4818e-28 9.9616e-01 hypermethylated 1.3545e-25 1.0000e+00 hypermethylated 1.1168e-08 9.9896e-01 hypermethylated 9.3065e-07 1.00000000 hypermethylated 0.4306356 5.4824e-05 lowCoverage 3.4265e-03 lowCoverage 0.8336079 0.676815 0.11621203 5 0.807832 0.694149 0.11368266 4.8156e-03 9.9978e-01 weaklyHypermeth 2.5345e-01 1.0000e+00 insignificant 8.8709e-03 9.9970e-01 weaklyHypermeth 5.2182e-01 1.0000e+00 insignificant 0.07098530 2.6828e-01 lowCoverage 1.0000e+00 lowCoverage 0.8128440 0.2384615 0.5798011 5 0.720855 0.322255 0.3986003 1.7706e-24 1.0000e+00 hypermethylated 4.4266e-22 1.000000 hypermethylated 4.1188e-09 0.99999858 hypermethylated 1.0297e-06 1.00000 hypermethylated 0.4929500 1.4776e-04 lowCoverage 9.8504e-03 lowCoverage 0.8120301 0.676815 0.1034713 5 0.78194 0.694149 0.0877912 6.1943e-03 9.8590e-01 weaklyHypermeth 2.5810e-01 1.0000e+00 insignificant 1.0672e-02 9.9794e-01 weaklyHypermeth 6.6700e-01 1.0000e+00 insignificant 0.13329970 3.8495e-02 lowCoverage 1.0000e+00 lowCoverage 0.238606 0.676815 -0.4439180 5 0.228942 0.694149 -0.4652073 1.0000e+00 3.0270e-10 hypomethylated 1.0000e+00 2.5225e-08 hypomethylated 1.0000e+00 1.1360e-05 hypomethylated 1.0000000 8.1142e-04 hypomethylated -0.3596503 0.00069869 lowCoverage 0.058225 lowCoverage chr9 66991128 66992128 32958 AQP7P1 ENSG00000186466 0.857128 577 6 0.686450 329 6 0.531917 204 7 0.76081 379 6 0.8009914 120 6 0.8072182 661 6 0.7413107 192 6 0.875152 285 6 0.816250 166 6 0.8184013 181 6 0.803331 468 6 0.691270 72 6 0.5571280 337 6 0.83077 44 4 0.649893 262 6 0.6952381 48 3 0.7735144 274 3 0.530233 368 6 0.7893797 240 6 0.6984302 619 6 0.821429 107 6 0.436295 214 6 0.67568 261 6 0.8194023 158 6 0.64053 107 6 0.736769 475 6 0.667352 165 6 0.703544 100 6 0.594497 237 6 0.636813 478 6 0.720255 692 6 0.8363331 682 6 0.464163 522 6 0.557899 185 6 0.502145 481 6 0.353218 135 6 0.449290 280 6 0.1745827 548 6 0.714440 558 6 0.64453 507 6 0.714958 371 6 0.756267 337 6 0.577894 482 6 0.840188 0.6303197 0.540416 0.813557 0.738536 0.756797 0.7123316 0.839711 0.7940915 0.7486949 0.7618180 0.661273 0.5559276 0.66398 0.699150 0.593301 0.7363330 0.5799225 0.7469108 0.7826425 0.754308 0.35475356 0.750950 0.7427196 0.627647 0.673391 0.583880 0.633624 0.620416 0.6720927 0.686091 0.8016112 0.311173 0.492167 0.5558456 0.275866 0.392143 0.1470665 0.644035 0.552570 0.65496 0.710262 0.5166888 6 0.7475962 0.6681175 0.05564130 6 0.714692 0.69017 0.02451980 0.121840 0.90734211 insignificant 1 1.00000 insignificant 0.29373852 0.904078 insignificant 1.00000 1 insignificant 0.0450000 0.2711094 insignificant 1 insignificant 0.7475962 0.3384472 0.38405365 6 0.714692 0.337514 0.37717804 6.7069e-28 9.9992e-01 hypermethylated 1.1178e-25 1.0000e+00 hypermethylated 9.6277e-12 9.9995e-01 hypermethylated 1.9255e-09 1.00000000 hypermethylated 0.3188582 1.2366e-03 weaklyHypermeth 4.5802e-02 weaklyHypermeth 0.7475962 0.605765 0.12995837 6 0.714692 0.634417 0.08027519 2.9340e-04 9.9995e-01 weaklyHypermeth 2.0957e-02 1.0000e+00 weaklyHypermeth 8.5388e-03 1.0000e+00 weaklyHypermeth 5.2182e-01 1.0000e+00 insignificant 0.05412328 2.0075e-01 insignificant 1.0000e+00 insignificant 0.6681175 0.3384472 0.3320455 6 0.690173 0.337514 0.3526582 1.9680e-15 9.9997e-01 hypermethylated 1.5138e-13 1.000000 hypermethylated 2.6443e-08 0.99993629 hypermethylated 5.2181e-06 1.00000 hypermethylated 0.2738582 2.4423e-03 weaklyHypermeth 9.0468e-02 weaklyHypermeth 0.6681175 0.605765 0.0824940 6 0.69017 0.634417 0.0557554 6.9008e-02 9.9901e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.0047e-01 9.9815e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00912332 8.4337e-01 insignificant 1.0000e+00 insignificant 0.338447 0.605765 -0.2483303 6 0.337514 0.634417 -0.2969029 9.9999e-01 2.6636e-08 hypomethylated 1.0000e+00 1.4019e-06 hypomethylated 1.0000e+00 9.0745e-06 hypomethylated 1.0000000 6.9804e-04 hypomethylated -0.2647349 0.00354042 weaklyHypometh 0.141617 insignificant chr9 67261505 67262505 32961 ENSG00000219176 0.799686 64 6 0.920032 284 6 0.890390 166 3 0.90190 99 5 0.9489336 113 2 0.7686851 193 6 0.7825629 159 3 0.740842 158 5 0.812660 122 3 0.9024027 124 6 0.875134 218 6 0.757043 149 3 0.8708486 182 6 0.94118 53 3 0.839289 136 3 0.8092532 118 3 0.8347968 98 3 0.935636 55 5 0.8621517 233 6 0.7467447 150 5 0.911111 66 6 0.694372 42 4 0.66031 91 6 0.6861349 80 6 0.96667 14 1 0.929324 244 6 0.704683 94 6 0.704845 68 5 0.831435 273 6 0.836825 215 5 0.930366 227 5 0.8037721 132 5 0.572194 306 6 0.454064 138 6 0.257810 250 5 0.900000 6 1 0.386914 127 6 0.7666611 217 5 0.649776 56 5 0.92429 94 5 0.858889 69 4 0.945833 59 4 0.810185 47 4 0.913938 0.8664854 0.845935 0.808011 0.929589 0.807038 0.8900628 0.871876 0.7960200 0.8843525 0.8868859 0.850573 0.8555733 0.95300 0.854002 0.895411 0.8397691 0.9429684 0.8975833 0.7647610 0.841350 0.68195403 0.878528 0.8668722 0.917827 0.895107 0.801366 0.808960 0.804321 0.9208760 0.863514 0.8446941 0.581036 0.356306 0.2793864 0.712050 0.495325 0.7708606 0.769061 0.874684 0.86850 0.886287 0.7964135 1 0.8611208 0.8621359 0.00175546 6 0.652875 0.76085 -0.10797268 0.669748 0.62094607 insignificant 1 1.00000 insignificant 0.59480228 0.621549 insignificant 1.00000 1 insignificant 0.0420215 0.2559194 lowCoverage 1 lowCoverage 0.8614206 0.5153257 0.35409835 6 0.725416 0.560009 0.16540702 8.6670e-30 9.9905e-01 hypermethylated 1.7334e-27 1.0000e+00 hypermethylated 3.3507e-10 9.9987e-01 hypermethylated 5.5845e-08 1.00000000 hypermethylated 0.2907345 3.1297e-02 lowCoverage 5.0478e-01 lowCoverage 0.8617688 0.846154 0.02734785 5 0.752875 0.851249 -0.09837432 4.4950e-01 9.1871e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.1994e-01 4.5453e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00921448 8.7372e-01 lowCoverage 1.0000e+00 lowCoverage 0.8620466 0.5153257 0.3498707 6 0.734275 0.560009 0.1742656 1.0748e-15 9.9336e-01 hypermethylated 8.9567e-14 1.000000 hypermethylated 6.2406e-07 0.99830249 hypermethylated 4.4576e-05 1.00000 hypermethylated 0.2487130 5.2607e-02 lowCoverage 7.2123e-01 lowCoverage 0.8631647 0.848297 0.0323841 5 0.80835 0.890277 -0.0819277 6.3596e-01 7.9612e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.9410e-01 5.4573e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03280697 6.1194e-01 lowCoverage 1.0000e+00 lowCoverage 0.515820 0.847352 -0.3126167 5 0.630010 0.876561 -0.2465508 1.0000e+00 1.7712e-05 hypomethylated 1.0000e+00 5.3674e-04 hypomethylated 1.0000e+00 1.3567e-04 hypomethylated 1.0000000 6.7834e-03 hypomethylated -0.2815200 0.03762871 lowCoverage 0.597281 lowCoverage chr9 67781305 67782305 32970 ENSG00000188442 0.796913 224 7 0.689569 157 8 0.686660 113 8 0.81080 110 7 0.7022826 60 4 0.6863584 314 9 0.5704138 89 9 0.782164 164 9 0.756530 109 9 0.7720588 70 7 0.719413 259 9 0.636465 92 8 0.6697901 124 9 0.93304 19 2 0.580423 91 9 0.7000000 35 5 0.5074568 74 6 0.715325 123 7 0.7065333 212 6 0.7606352 248 9 0.525613 58 7 0.578089 77 6 0.75060 185 7 0.7583791 84 8 0.70418 46 6 0.604033 243 9 0.623277 80 5 0.714628 66 6 0.551525 179 7 0.804083 167 9 0.722560 204 9 0.5964754 312 9 0.598145 138 8 0.567121 125 8 0.555862 203 7 0.769841 45 5 0.661836 124 8 0.5470884 227 9 0.623397 235 7 0.66838 271 7 0.687306 206 7 0.749781 170 7 0.613995 208 7 0.756411 0.6220537 0.682796 0.772929 0.623981 0.726279 0.6401994 0.695650 0.7307011 0.7392630 0.7112171 0.611900 0.6716258 0.72705 0.538240 0.627919 0.5764393 0.7004081 0.7081243 0.6963230 0.699160 0.65943701 0.720022 0.6825876 0.649008 0.675174 0.604623 0.741433 0.638585 0.7665552 0.693024 0.6514387 0.619730 0.624822 0.6038091 0.758883 0.652185 0.6084533 0.714359 0.739899 0.72835 0.730520 0.7143928 4 0.7085969 0.6831276 0.01526160 9 0.728947 0.57812 0.15082233 0.063012 0.98600729 insignificant 1 1.00000 insignificant 0.41378402 0.955958 insignificant 1.00000 1 insignificant 0.0480207 0.1682197 insignificant 1 insignificant 0.7082865 0.6032483 0.08817592 9 0.711478 0.583796 0.12768207 5.1631e-08 1.0000e+00 weaklyHypermeth 1.2293e-06 1.0000e+00 weaklyHypermeth 3.8847e-03 9.9960e-01 weaklyHypermeth 6.3684e-02 1.00000000 weaklyHypermeth 0.0924921 5.0044e-02 insignificant 6.9506e-01 insignificant 0.7085969 0.780734 -0.03715915 7 0.728947 0.650648 0.07829860 1.7784e-02 1.2988e-01 inconclusive 6.1324e-01 1.0000e+00 insignificant 5.1271e-01 2.1631e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.04056916 2.3458e-01 insignificant 1.0000e+00 insignificant 0.6842105 0.6032483 0.0733419 9 0.642708 0.583796 0.0589118 8.3018e-05 9.9941e-01 weaklyHypermeth 1.3609e-03 1.000000 weaklyHypermeth 2.2566e-02 0.99626809 weaklyHypermeth 2.7860e-01 1.00000 insignificant 0.0444714 3.3353e-01 insignificant 1.0000e+00 insignificant 0.6831276 0.780734 -0.0522370 7 0.57812 0.650648 -0.0725237 4.2516e-01 4.2732e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 8.4707e-01 1.8488e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00745153 8.3953e-01 insignificant 1.0000e+00 insignificant 0.603248 0.782288 -0.1135200 7 0.583796 0.660908 -0.0771116 9.9597e-01 1.7641e-05 weaklyHypometh 1.0000e+00 5.3674e-04 weaklyHypometh 9.9428e-01 9.3795e-03 weaklyHypometh 1.0000000 1.6172e-01 insignificant -0.0519229 0.25692550 insignificant 1.000000 insignificant chr9 69018394 69019394 32987 ENSG00000220651 0.703073 301 7 0.665036 185 7 0.663517 150 7 0.83295 263 7 0.6211146 61 7 0.6825895 456 7 0.5045536 104 7 0.658066 151 7 0.666068 139 7 0.8049553 141 7 0.720107 274 7 0.623779 48 5 0.7010852 184 7 0.80625 21 2 0.733703 124 7 0.6063492 30 3 0.5571429 108 6 0.735331 365 7 0.7241925 154 7 0.7013281 399 7 0.730723 124 7 0.661583 184 7 0.74639 181 7 0.7670068 87 5 0.73292 110 7 0.710885 230 7 0.724537 139 7 0.720833 46 4 0.568600 157 7 0.659062 213 7 0.539633 236 7 0.7052607 448 7 0.536227 213 7 0.501998 215 7 0.498754 158 7 0.520635 80 7 0.578694 117 6 0.5274342 242 7 0.629964 379 7 0.77156 458 7 0.694718 357 7 0.649640 373 7 0.697548 423 7 0.743380 0.7323629 0.700306 0.873580 0.731677 0.741689 0.6352010 0.732118 0.7482199 0.8591357 0.7911473 0.693003 0.7873803 0.74008 0.812849 0.712241 0.6677966 0.7746440 0.8105389 0.7472602 0.832826 0.68963825 0.804084 0.8128329 0.785653 0.762498 0.802279 0.840678 0.709305 0.7596271 0.712034 0.7952118 0.565212 0.533727 0.5736016 0.583164 0.658211 0.5915903 0.687765 0.803015 0.73499 0.734236 0.7708426 5 0.7594314 0.7614849 -0.00948431 7 0.608313 0.63475 -0.02643517 0.411139 0.45273001 insignificant 1 1.00000 insignificant 0.91369724 0.320398 insignificant 1.00000 1 insignificant -0.0033932 0.9017183 insignificant 1 insignificant 0.7596390 0.5492683 0.19105219 7 0.695215 0.528398 0.16681675 4.9691e-17 1.0000e+00 weaklyHypermeth 2.9230e-15 1.0000e+00 weaklyHypermeth 1.1575e-09 1.0000e+00 weaklyHypermeth 1.6535e-07 1.00000000 weaklyHypermeth 0.1582692 2.0118e-07 weaklyHypermeth 2.2353e-05 weaklyHypermeth 0.7596390 0.751256 0.01537539 7 0.695215 0.688142 0.00707269 2.8138e-01 7.1821e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.2467e-01 6.6339e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00312616 9.2039e-01 insignificant 1.0000e+00 insignificant 0.7624361 0.5492683 0.1945583 7 0.689712 0.528398 0.1613141 1.5856e-12 9.9999e-01 weaklyHypermeth 8.3451e-11 1.000000 weaklyHypermeth 2.0646e-10 0.99999998 weaklyHypermeth 6.8821e-08 1.00000 weaklyHypermeth 0.1616624 4.0999e-06 weaklyHypermeth 4.0999e-04 weaklyHypermeth 0.7624361 0.751256 0.0230727 7 0.68971 0.688142 0.0015700 3.0759e-01 3.3951e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.3495e-01 6.4902e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00026701 9.9347e-01 insignificant 1.0000e+00 insignificant 0.549268 0.751256 -0.1706570 7 0.528398 0.688142 -0.1597441 1.0000e+00 1.3595e-10 weaklyHypometh 1.0000e+00 1.3505e-08 weaklyHypometh 1.0000e+00 8.4631e-08 weaklyHypometh 1.0000000 1.6926e-05 weaklyHypometh -0.1613954 0.00111775 weaklyHypometh 0.078543 weaklyHypometh chr9 69584583 69585583 32990 ENSG00000220381 0.713863 335 7 0.615047 149 7 0.715852 134 7 0.72625 236 7 0.7244631 65 7 0.6791354 454 7 0.6265074 96 5 0.671967 146 7 0.633874 126 7 0.7269313 111 7 0.732101 241 7 0.698866 39 5 0.7459206 160 7 0.90000 10 1 0.724163 139 7 0.5694444 33 2 0.6502064 97 6 0.675102 311 7 0.7316832 143 7 0.6443733 374 7 0.769623 117 7 0.534463 171 7 0.71707 165 7 0.6314103 107 7 0.79439 109 7 0.673985 220 7 0.688426 148 7 0.632591 59 6 0.677156 112 7 0.641801 188 7 0.576734 209 7 0.6753968 401 7 0.538410 158 7 0.442532 174 7 0.367417 132 5 0.611341 82 7 0.674948 92 7 0.4562081 230 7 0.652605 349 7 0.73238 368 7 0.649644 335 7 0.670666 312 7 0.638794 382 7 0.778501 0.7239382 0.738775 0.800910 0.796313 0.734853 0.6815387 0.783488 0.7138808 0.7865099 0.8098811 0.671551 0.8123373 NA 0.779193 0.686488 0.7525145 0.7536920 0.7632050 0.7089258 0.834735 0.64511833 0.795801 0.7409810 0.849669 0.740565 0.746154 0.704960 0.710057 0.7462163 0.706748 0.7492009 0.598615 0.447218 0.4755745 0.668066 0.699463 0.5523185 0.711478 0.787116 0.72216 0.753908 0.7274050 5 0.7634598 0.7377866 0.00919127 7 0.731512 0.71054 0.02097291 0.347060 0.89213125 insignificant 1 1.00000 insignificant 0.48488441 0.698826 insignificant 1.00000 1 insignificant 0.0275337 0.3014724 insignificant 1 insignificant 0.7634598 0.5253456 0.22409831 7 0.731512 0.546973 0.18453902 1.4757e-19 1.0000e+00 hypermethylated 9.2230e-18 1.0000e+00 hypermethylated 2.9252e-08 1.0000e+00 hypermethylated 2.0894e-06 1.00000000 hypermethylated 0.1801449 1.0351e-02 weaklyHypermeth 2.3143e-01 insignificant 0.7633902 0.747423 0.02518030 7 0.693157 0.667643 0.02551385 6.2332e-02 7.2132e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.8670e-02 4.5440e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02647044 2.6479e-01 insignificant 1.0000e+00 insignificant 0.7377866 0.5253456 0.2125898 7 0.710539 0.546973 0.1635661 2.4626e-13 1.0000e+00 hypermethylated 1.4486e-11 1.000000 hypermethylated 2.8658e-07 0.99999960 hypermethylated 2.2045e-05 1.00000 hypermethylated 0.1526113 2.0497e-02 weaklyHypermeth 3.9417e-01 insignificant 0.7376559 0.747423 0.0206616 7 0.66919 0.667643 0.0015448 6.4149e-02 2.8036e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.5679e-02 2.2350e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant -0.00106324 9.6903e-01 insignificant 1.0000e+00 insignificant 0.524798 0.747423 -0.1931928 7 0.482255 0.667643 -0.1853879 1.0000e+00 4.0098e-09 weaklyHypometh 1.0000e+00 2.6732e-07 weaklyHypometh 1.0000e+00 9.0503e-06 weaklyHypometh 1.0000000 6.9804e-04 weaklyHypometh -0.1536745 0.02043449 weaklyHypometh 0.439239 insignificant chr9 70773816 70774816 33014 ENSG00000207000 0.830543 192 9 0.750951 176 9 0.596549 116 7 0.782598 175 9 0.805291 110 9 0.726634 274 9 0.736663 133 9 0.774740 198 9 0.566034 139 6 0.736649 124 9 0.83903 338 9 0.679331 80 6 0.8143999 189 9 0.6677778 47 5 0.816697 181 9 0.768519 71 4 0.692185 91 4 0.802944 204 8 0.819398 142 9 0.740612 204 8 0.719952 72 8 0.758657 111 8 0.83426 115 6 0.765534 79 8 0.845153 66 6 0.814160 185 9 0.817276 137 9 0.751419 81 4 0.742769 157 8 0.760391 201 9 0.8029304 216 9 0.79670 305 9 0.744209 150 9 0.679157 123 9 0.7504762 172 9 0.846379 51 2 0.733273 95 7 0.720235 193 9 0.849866 198 8 0.756675 206 9 0.852834 168 8 0.809176 134 9 0.770597 207 8 0.783507 0.677006 0.638636 0.728793 0.793536 0.702131 0.762854 0.745650 0.684347 0.728720 0.787608 0.653820 0.7531147 0.725524 0.795729 0.795165 0.794790 0.769750 0.797948 0.756511 0.807359 0.639237 0.797952 0.700869 0.809881 0.792920 0.727517 0.817182 0.716359 0.746502 0.7533578 0.733026 0.752205 0.673464 0.7428353 0.721447 0.7278237 0.7815353 0.843049 0.773784 0.780211 0.840584 0.849395 3 0.760050 0.765217 -0.0033454 8 0.753385 0.75224 0.0011419 3.9322e-01 0.5237364 insignificant 1.0000000 1.00000 insignificant 0.89294417 0.24338288 insignificant 1.00000 1.00000 insignificant -0.0367235 0.0824279 insignificant 1 insignificant 0.760555 0.725765 0.0314587 9 0.767330 0.740862 0.0264674 4.5290e-02 9.4865e-01 weaklyHypermeth 5.3282e-01 1.0000e+00 insignificant 5.7757e-01 8.5130e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0017554 9.5160e-01 insignificant 1.0000e+00 insignificant 0.760050 0.820372 -0.0648779 8 0.753385 0.773102 -0.0197166 9.5473e-01 7.7665e-03 weaklyHypometh 1.0000e+00 0.67033854 insignificant 9.9169e-01 0.01327557 weaklyHypometh 1.0000e+00 0.780916 insignificant -0.0604526 4.0675e-02 weaklyHypometh 1.000000 insignificant 0.764877 0.725765 0.03316082 8 0.746249 0.740862 0.005387 1.7410e-02 9.2104e-01 weaklyHypermeth 2.2320e-01 1.0000e+00 insignificant 2.0545e-01 9.2709e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0384790 1.6951e-01 insignificant 1.0000e+00 insignificant 0.765217 0.820372 -0.0551273 8 0.752244 0.773102 -0.0208584 9.8847e-01 2.5408e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.6425e-01 1.2910e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0237291 3.3352e-01 insignificant 1.000000 insignificant 0.725765 0.820485 -0.089923 8 0.740862 0.770657 -0.0297945 1.0000e+00 6.2397e-03 weaklyHypometh 1.0000e+00 1.0400e-01 insignificant 9.9988e-01 4.1626e-02 weaklyHypometh 1.00000000 7.0553e-01 insignificant -0.0622080 6.8358e-02 insignificant 1.0000000 insignificant chr9 70984116 70985116 33027 TJP2 ENSG00000119139 0.707423 191 8 0.805009 138 10 0.688920 106 6 0.783219 193 10 0.833889 77 9 0.828064 381 10 0.750594 184 10 0.723707 113 7 0.730966 128 10 0.807672 88 9 0.74584 301 10 0.482143 47 4 0.8256676 147 10 0.9000000 34 2 0.803526 83 7 0.692628 64 5 0.783117 58 6 0.828807 161 10 0.690808 119 10 0.835578 291 10 0.735480 97 7 0.801690 113 7 0.77555 181 10 0.774958 113 7 0.796782 186 7 0.683247 177 10 0.804085 192 6 0.595346 51 5 0.833087 120 8 0.827548 149 10 0.8167739 162 10 0.79605 373 10 0.794843 139 9 0.729270 166 10 0.7367108 163 8 0.607481 60 4 0.722582 99 7 0.748210 181 10 0.875649 255 8 0.761285 306 10 0.825526 222 8 0.834742 183 5 0.853809 288 10 0.757179 0.733263 0.714189 0.802609 0.822162 0.795340 0.761693 0.734320 0.771169 0.833936 0.767517 0.664736 0.8334521 0.877015 0.845101 0.715246 0.758667 0.774213 0.731130 0.844553 0.726992 0.795251 0.761543 0.746067 0.815190 0.681738 0.774584 0.724974 0.823655 0.816825 0.8129280 0.783021 0.808603 0.772900 0.7420843 0.662766 0.7355503 0.7435592 0.867558 0.804506 0.823754 0.809495 0.862070 2 0.794077 0.728318 0.0218567 10 0.828181 0.79775 0.0304270 2.4881e-01 0.9431959 insignificant 1.0000000 1.00000 insignificant 0.67737591 0.40984109 insignificant 1.00000 1.00000 insignificant -0.0076713 0.7865137 insignificant 1 insignificant 0.793580 0.757426 0.0229803 10 0.796942 0.747296 0.0496454 8.0113e-02 5.5766e-01 insignificant 8.3451e-01 1.0000e+00 insignificant 9.8395e-02 5.3327e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0391963 2.4724e-01 insignificant 1.0000e+00 insignificant 0.793437 0.845295 -0.0395439 10 0.776636 0.817665 -0.0410295 9.9114e-01 1.5692e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant 9.9562e-01 0.00223629 weaklyHypometh 1.0000e+00 0.372715 insignificant -0.0678230 2.7969e-02 weaklyHypometh 1.000000 insignificant 0.727606 0.757426 -0.00091022 10 0.760983 0.747296 0.013686 2.3107e-01 7.0840e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.5579e-01 9.8741e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0468677 1.7415e-01 insignificant 1.0000e+00 insignificant 0.727559 0.845295 -0.0577394 10 0.762081 0.817665 -0.0555845 9.8319e-01 3.1475e-03 weaklyHypometh 1.0000e+00 4.4946e-01 insignificant 9.5609e-01 1.7190e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant -0.0601516 5.0456e-02 insignificant 1.000000 insignificant 0.758065 0.845295 -0.058005 10 0.772026 0.817665 -0.0456394 9.6192e-01 2.9482e-03 weaklyHypometh 1.0000e+00 5.7808e-02 weaklyHypometh 9.8376e-01 6.6836e-03 weaklyHypometh 1.00000000 1.7137e-01 insignificant -0.1070193 8.7392e-03 weaklyHypometh 0.2570346 insignificant chr9 74346716 74347716 33155 ENSG00000211074 0.673038 256 11 0.720873 372 12 0.689510 123 11 0.759800 292 11 0.657232 130 11 0.745938 389 11 0.753538 145 11 0.792484 169 11 0.609449 140 11 0.789011 84 12 0.74540 412 11 0.855844 49 6 0.7276203 116 8 0.7355159 76 9 0.603920 150 10 0.875661 39 2 0.750000 39 3 0.673023 214 11 0.715853 208 11 0.775448 292 11 0.545046 76 5 0.758803 98 8 0.60580 183 11 0.623068 95 6 0.765168 165 10 0.731647 360 12 0.687233 123 10 0.776542 76 7 0.664633 199 11 0.697884 296 11 0.7887683 436 11 0.75017 375 12 0.661849 300 11 0.500614 160 12 0.5860255 359 11 0.518831 79 4 0.550983 234 11 0.532915 305 11 0.743118 242 11 0.737814 234 11 0.827795 319 11 0.710747 110 8 0.774997 234 11 0.807517 0.769068 0.734900 0.825430 0.795529 0.777039 0.755874 0.778987 0.738787 0.849117 0.836851 0.833146 0.8724621 0.834689 0.779487 0.853365 0.810266 0.705297 0.791019 0.819665 0.717767 0.800458 0.776238 0.777652 0.783256 0.848342 0.736808 0.767976 0.792871 0.820715 0.8052890 0.853310 0.667791 0.524366 0.6675299 0.573319 0.6464431 0.5866693 0.788058 0.803531 0.840339 0.787171 0.828177 3 0.771042 0.810331 -0.0181368 11 0.677225 0.68922 -0.0119958 9.6661e-01 0.0631851 insignificant 1.0000000 1.00000 insignificant 0.69761848 0.40407160 insignificant 1.00000 1.00000 insignificant 0.0328942 0.2391496 insignificant 1 insignificant 0.773764 0.579680 0.1585112 11 0.729319 0.568580 0.1607392 2.3924e-24 9.9955e-01 weaklyHypermeth 4.7848e-22 1.0000e+00 weaklyHypermeth 1.6972e-10 9.9992e-01 weaklyHypermeth 4.2430e-08 1.0000e+00 weaklyHypermeth 0.1739216 1.2934e-04 weaklyHypermeth 1.2934e-02 weaklyHypermeth 0.774088 0.792801 -0.0209750 11 0.738012 0.761502 -0.0234894 8.3999e-01 1.1848e-01 insignificant 1.0000e+00 1.00000000 insignificant 6.9777e-01 0.28384468 insignificant 1.0000e+00 1.000000 insignificant -0.0264365 3.2350e-01 insignificant 1.000000 insignificant 0.812880 0.579680 0.19968252 11 0.733691 0.568580 0.165111 5.3952e-22 9.9999e-01 weaklyHypermeth 8.9920e-20 1.0000e+00 weaklyHypermeth 1.5010e-07 9.9986e-01 weaklyHypermeth 3.0021e-05 1.0000e+00 weaklyHypermeth 0.1410275 8.2409e-04 weaklyHypermeth 4.3373e-02 weaklyHypermeth 0.814890 0.792801 -0.0026246 11 0.764529 0.761502 0.0030267 2.1559e-01 3.5778e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.4825e-01 3.3444e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0593307 6.9111e-02 insignificant 1.000000 insignificant 0.580420 0.792801 -0.204117 11 0.580247 0.761502 -0.1812545 9.9803e-01 4.0758e-12 hypomethylated 1.0000e+00 8.1515e-10 hypomethylated 9.9901e-01 8.9410e-06 hypomethylated 1.00000000 1.7882e-03 hypomethylated -0.2003581 1.2264e-04 hypomethylated 0.0153296 hypomethylated chr9 77207616 77208616 33203 ENSG00000220707 0.636674 579 15 0.561562 496 15 0.664217 149 10 0.656148 496 15 0.551647 200 14 0.591289 518 13 0.609528 212 12 0.716003 356 15 0.587626 266 15 0.646687 286 15 0.63908 531 15 0.582778 78 7 0.6736554 417 15 0.6778178 194 15 0.607927 307 15 0.578046 96 10 0.556230 200 9 0.645156 502 12 0.632425 268 13 0.623166 339 13 0.636690 160 9 0.592036 191 10 0.57665 246 15 0.616122 206 10 0.564713 187 13 0.614807 516 13 0.611057 295 10 0.500056 189 9 0.543821 268 12 0.575174 368 12 0.6151038 449 13 0.67986 618 13 0.556456 325 14 0.453296 226 13 0.6242424 89 7 0.626667 94 5 0.571366 264 13 0.535972 472 13 0.614296 394 14 0.659141 455 15 0.649435 365 15 0.641010 429 15 0.557563 389 15 0.480843 0.527076 0.570918 0.520371 0.495136 0.534556 0.484924 0.607482 0.486701 0.525056 0.583299 0.434575 0.5445280 0.515291 0.547350 0.537760 0.493828 0.465086 0.562385 0.565094 0.471658 0.503609 0.462085 0.486494 0.502211 0.527618 0.496174 0.446197 0.490991 0.548254 0.5591022 0.553692 0.481673 0.436247 0.6117122 0.521608 0.4963640 0.4473493 0.498601 0.537974 0.547387 0.486741 0.498895 8 0.641635 0.632349 0.0052327 13 0.650597 0.64185 0.0087477 5.6475e-01 0.4907934 insignificant 1.0000000 1.00000 insignificant 0.58164067 0.79191704 insignificant 1.00000 1.00000 insignificant 0.0280429 0.1076252 insignificant 1 insignificant 0.641646 0.551020 0.0886887 13 0.638097 0.568124 0.0699727 2.1753e-13 9.0980e-01 weaklyHypermeth 1.1449e-11 1.0000e+00 weaklyHypermeth 7.8069e-04 9.2435e-01 weaklyHypermeth 2.1274e-02 1.0000e+00 weaklyHypermeth 0.0605500 7.0897e-02 insignificant 1.0000e+00 insignificant 0.641757 0.513540 0.0019606 15 0.659385 0.640917 0.0184681 1.5981e-01 7.0930e-02 insignificant 1.0000e+00 1.00000000 insignificant 5.6970e-01 0.04454344 inconclusive 1.0000e+00 1.000000 insignificant -0.0024055 9.1153e-01 insignificant 1.000000 insignificant 0.632150 0.550715 0.08275051 13 0.617972 0.539332 0.078640 6.0168e-07 9.8435e-01 weaklyHypermeth 2.1489e-05 1.0000e+00 weaklyHypermeth 2.2986e-02 9.6421e-01 weaklyHypermeth 3.9631e-01 1.0000e+00 insignificant 0.0325071 3.0324e-01 insignificant 1.0000e+00 insignificant 0.632178 0.513048 -0.0054779 13 0.604093 0.582094 0.0219997 3.3776e-01 3.9543e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.8533e-01 2.5623e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0304484 2.1361e-01 insignificant 1.000000 insignificant 0.551020 0.513553 -0.093521 13 0.568124 0.649724 -0.0816004 9.4868e-01 2.5673e-06 weaklyHypometh 1.0000e+00 1.3512e-04 weaklyHypometh 8.2572e-01 2.2671e-03 weaklyHypometh 1.00000000 7.0846e-02 weaklyHypometh -0.0629555 8.2338e-02 insignificant 1.0000000 insignificant chr9 78060516 78061516 33211 PCSK5 ENSG00000099139 0.967158 166 6 0.908346 322 6 0.657407 47 6 0.956506 134 6 0.989583 40 2 0.942760 378 6 0.953030 78 6 0.934524 111 6 0.905754 74 6 0.903409 54 6 0.83146 244 6 1.000000 14 0 0.9824561 62 6 1.0000000 40 2 0.976667 87 6 1.000000 6 0 1.000000 1 0 0.866891 197 6 0.934113 263 6 0.941094 322 6 0.919048 99 6 0.916667 28 2 0.94170 139 6 0.843677 109 6 0.897487 32 2 0.956949 307 6 0.763287 104 6 0.857143 31 4 0.952899 283 6 0.943694 318 6 0.9450643 388 6 0.94458 323 6 0.038161 213 6 0.000000 49 2 0.0000000 238 6 0.833333 18 0 0.006507 282 6 0.626747 267 6 0.907748 248 6 0.818142 197 6 0.916708 109 6 0.867102 71 6 0.860875 104 6 0.972253 0.896401 0.607949 0.960901 0.983740 0.939797 0.965632 0.918409 0.905101 0.868718 0.835755 1.000000 0.9730424 1.000000 0.977398 0.968812 NA 0.873846 0.925106 0.939620 0.875261 0.869919 0.951428 0.828236 0.875694 0.962576 0.771249 1.000000 0.965536 0.941010 0.9459587 0.946062 0.037174 0.000000 0.0000000 0.747967 0.0055547 0.6022852 0.916281 0.817255 0.897376 0.810776 0.865080 2 0.917393 0.931944 -0.0145206 6 0.919018 0.93217 -0.0131525 8.8448e-01 0.2184686 insignificant 1.0000000 1.00000 insignificant 0.38258528 0.87840946 insignificant 1.00000 1.00000 insignificant 0.0257081 0.3033173 lowCoverage 1 lowCoverage 0.917393 0.179343 0.7363161 6 0.919018 0.186976 0.7320422 2.6489e-47 1.0000e+00 hypermethylated 1.3245e-44 1.0000e+00 hypermethylated 3.0652e-10 1.0000e+00 hypermethylated 6.1304e-08 1.0000e+00 hypermethylated 0.6817666 6.6124e-03 lowCoverage 2.0664e-01 lowCoverage 0.917393 0.868313 0.0489263 6 0.919018 0.871948 0.0470701 1.0689e-02 9.9977e-01 weaklyHypermeth 4.6475e-01 1.00000000 insignificant 3.3351e-03 0.99983417 weaklyHypermeth 3.7057e-01 1.000000 insignificant 0.0584429 3.6619e-02 lowCoverage 1.000000 lowCoverage 0.931513 0.179007 0.74974119 6 0.799003 0.160265 0.638738 7.8533e-32 1.0000e+00 hypermethylated 2.6178e-29 1.0000e+00 hypermethylated 4.5107e-08 1.0000e+00 hypermethylated 1.1277e-05 1.0000e+00 hypermethylated 0.6560586 7.7884e-03 lowCoverage 2.3601e-01 lowCoverage 0.931944 0.868313 0.0633512 6 0.932171 0.871948 0.0602226 7.8159e-04 9.9990e-01 weaklyHypermeth 6.0122e-02 1.0000e+00 weaklyHypermeth 3.1792e-02 9.9939e-01 weaklyHypermeth 1.0000e+00 1.00000000 insignificant 0.0327349 2.0773e-01 insignificant 1.000000 insignificant 0.179343 0.868313 -0.687390 6 0.186976 0.871948 -0.6849721 1.0000e+00 1.0518e-14 hypomethylated 1.0000e+00 2.6295e-12 hypomethylated 1.0000e+00 4.8624e-05 hypomethylated 1.00000000 5.1563e-03 hypomethylated -0.6233237 9.5818e-03 lowCoverage 0.2661615 lowCoverage chr9 78159716 78160716 33220 ENSG00000220662 0.773737 134 6 0.542860 95 6 0.666667 45 4 0.780423 106 6 0.759259 30 2 0.765244 72 6 0.654762 36 2 0.905495 83 6 0.833333 31 6 0.895238 33 5 0.64166 154 6 0.791667 28 2 0.8152958 52 6 0.8759921 27 2 0.668981 57 6 0.433333 25 1 0.875000 18 0 0.617566 142 6 0.739316 57 4 0.716049 50 6 0.833333 15 0 0.666667 6 0 0.69818 110 6 0.669231 46 6 0.585317 52 2 0.860411 91 6 0.900000 22 2 0.763889 18 0 0.740216 91 6 0.781349 58 6 0.8912698 48 6 0.85985 54 6 0.466787 80 6 0.657937 49 5 0.7581685 121 6 1.000000 10 0 0.740414 58 2 0.812891 53 6 0.827381 83 6 0.816667 96 6 0.822790 98 6 0.791667 63 2 0.747884 113 6 0.810207 0.603851 0.666667 0.787803 0.769006 0.798167 0.678571 0.894737 0.863158 0.871429 0.802478 0.802632 0.7918660 0.848058 0.699196 0.460526 0.901316 0.799517 0.740553 0.841520 0.736842 0.789474 0.710948 0.709312 0.661028 0.821871 0.885868 0.714912 0.811836 0.859492 0.8953634 0.883971 0.687786 0.648496 0.7989147 1.000000 0.8413313 0.6815334 0.828947 0.798246 0.795383 0.743421 0.790518 0 0.762951 0.793103 -0.0238248 6 0.713942 0.80978 -0.0958390 9.9292e-01 0.0855960 insignificant 1.0000000 1.00000 insignificant 0.99872571 0.11915378 insignificant 1.00000 1.00000 insignificant -0.0332156 0.4144406 lowCoverage 1 lowCoverage 0.762951 0.742547 0.0209835 6 0.713942 0.656211 0.0577305 1.7501e-01 2.7523e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.6463e-01 2.8955e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0017722 9.8229e-01 lowCoverage 1.0000e+00 lowCoverage 0.762765 0.803532 -0.0265301 6 0.682157 0.854988 -0.1728310 9.4925e-01 3.5112e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant 9.6164e-01 0.21963861 insignificant 1.0000e+00 1.000000 insignificant -0.0636836 5.2196e-02 lowCoverage 1.000000 lowCoverage 0.792144 0.738544 0.05678964 6 0.758151 0.546843 0.211308 3.8582e-01 9.8966e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.9601e-01 9.8991e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0314434 6.9765e-01 lowCoverage 1.0000e+00 lowCoverage 0.792763 0.803532 -0.0057878 6 0.788645 0.854988 -0.0663432 6.6486e-01 4.1476e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.1133e-01 7.7140e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0304680 3.6720e-01 lowCoverage 1.000000 lowCoverage 0.744565 0.803532 -0.048707 6 0.729124 0.854988 -0.1258649 6.0501e-01 1.5768e-02 weaklyHypometh 1.0000e+00 2.3189e-01 insignificant 7.2888e-01 2.1635e-01 insignificant 1.00000000 1.0000e+00 insignificant -0.0619114 4.3392e-01 lowCoverage 1.0000000 lowCoverage chr9 79601716 79602716 33270 GNA14 ENSG00000156049 0.799781 78 5 0.673636 113 5 0.672121 70 5 0.849020 89 5 0.646154 56 5 0.781527 172 5 0.644928 103 5 0.771305 103 5 0.799560 68 5 0.856410 58 5 0.84570 247 5 0.536364 50 4 0.7237061 117 5 0.7417582 69 5 0.682857 66 5 0.735897 60 5 0.562500 16 0 0.801831 99 5 0.720053 141 5 0.766573 125 5 0.770000 26 3 0.810101 48 5 0.77614 80 5 0.705904 59 5 0.883636 49 5 0.857350 125 5 0.680575 111 5 0.681818 26 2 0.886061 59 5 0.829925 136 5 0.7221231 153 5 0.78814 178 5 0.676793 108 5 0.532620 79 5 0.7296552 214 5 0.458333 11 0 0.547179 82 5 0.689114 100 5 0.824416 84 5 0.711765 85 5 0.761477 83 5 0.744762 43 5 0.737500 81 5 0.798849 0.669740 0.672165 0.844129 0.645599 0.774701 0.642556 0.766153 0.793147 0.851268 0.844136 0.528090 0.7162808 0.735801 0.672124 0.724899 0.627657 0.799643 0.711475 0.760842 0.762640 0.804109 0.768901 0.707157 0.881307 0.854471 0.674942 0.677988 0.885615 0.824795 0.7182675 0.786359 0.676749 0.533528 0.7376183 0.490364 0.5462567 0.6858684 0.822929 0.705366 0.760618 0.741627 0.729986 5 0.756316 0.782857 -0.0230315 5 0.754474 0.77722 -0.0227447 7.9623e-01 0.1435712 insignificant 1.0000000 1.00000 insignificant 0.99450417 0.03232152 weaklyHypometh 1.00000 1.00000 insignificant -0.0520644 0.0864179 lowCoverage 1 lowCoverage 0.756316 0.626263 0.1253314 5 0.754474 0.635590 0.1188837 3.0195e-06 9.9806e-01 weaklyHypermeth 8.5635e-05 1.0000e+00 weaklyHypermeth 8.8127e-04 9.9854e-01 weaklyHypermeth 2.3191e-02 1.0000e+00 weaklyHypermeth 0.1249680 3.5081e-02 lowCoverage 6.7463e-01 lowCoverage 0.756316 0.763298 -0.0031536 5 0.754474 0.756763 -0.0022886 4.3653e-01 4.4064e-01 insignificant 1.0000e+00 1.00000000 insignificant 5.4583e-01 0.37620601 insignificant 1.0000e+00 1.000000 insignificant -0.0254000 3.7196e-01 lowCoverage 1.000000 lowCoverage 0.782857 0.626263 0.14689964 5 0.777219 0.635590 0.141628 3.8792e-06 9.9986e-01 weaklyHypermeth 1.2123e-04 1.0000e+00 weaklyHypermeth 3.8951e-05 9.9999e-01 weaklyHypermeth 2.4345e-03 1.0000e+00 weaklyHypermeth 0.1770324 7.5924e-03 lowCoverage 2.3601e-01 lowCoverage 0.782857 0.763298 0.0189281 5 0.777219 0.756763 0.0204561 2.4886e-01 7.2549e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.1347e-01 9.3003e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0266644 3.6593e-01 lowCoverage 1.000000 lowCoverage 0.626263 0.763298 -0.128411 5 0.635590 0.756763 -0.1211723 9.7888e-01 4.3517e-04 weaklyHypometh 1.0000e+00 1.0120e-02 weaklyHypometh 9.9963e-01 1.1179e-03 weaklyHypometh 1.00000000 4.6581e-02 weaklyHypometh -0.1503680 1.7105e-02 lowCoverage 0.4099959 lowCoverage chr9 80129316 80130316 33304 PSAT1 ENSG00000135069 0.927077 310 8 0.910520 111 8 0.848237 90 8 0.918109 268 8 0.875000 24 1 0.936292 269 8 0.836648 43 4 0.923344 124 8 0.885417 74 8 0.906250 47 5 0.95681 190 8 0.708333 32 1 0.9119448 129 8 1.0000000 2 0 0.885025 102 5 0.666667 23 1 0.858333 31 2 0.852576 260 8 0.913225 73 8 0.943565 231 8 0.970328 80 5 0.819444 78 5 0.85720 165 8 0.817009 54 5 0.906101 78 8 0.905247 105 8 0.897324 104 8 0.770833 36 3 0.887392 90 8 0.860682 170 8 0.9195991 154 8 0.95986 384 8 0.735871 120 8 0.698646 101 8 0.6000000 126 5 0.712500 63 5 0.718750 60 8 0.631956 172 8 0.755686 163 8 0.816382 198 8 0.836379 211 8 0.754510 211 8 0.772892 240 8 0.897581 0.877311 0.788108 0.886740 0.817164 0.917569 0.788331 0.889001 0.898632 0.860075 0.931334 0.626866 0.8850434 NA 0.830363 0.519900 0.787562 0.786367 0.864590 0.922551 0.956694 0.694859 0.854875 0.844226 0.886505 0.859835 0.874479 0.752488 0.922143 0.844122 0.8969412 0.955637 0.603098 0.569972 0.5316552 0.546269 0.6063433 0.4898643 0.641126 0.709388 0.724179 0.614660 0.643224 1 0.899712 0.895861 -0.0101062 8 0.901626 0.90632 -0.0046977 1.4850e-01 0.6351420 insignificant 1.0000000 1.00000 insignificant 0.19147119 0.46500813 insignificant 1.00000 1.00000 insignificant 0.0022504 0.9270934 insignificant 1 insignificant 0.899712 0.540498 0.2666254 8 0.901626 0.693248 0.2083786 6.4338e-20 8.3389e-01 hypermethylated 8.0422e-18 1.0000e+00 hypermethylated 1.5699e-06 5.6181e-01 hypermethylated 1.4272e-04 1.0000e+00 hypermethylated 0.2002148 1.2710e-05 hypermethylated 1.4122e-03 hypermethylated 0.899712 0.773216 0.1276256 8 0.901626 0.784954 0.1166726 6.3400e-09 7.6193e-01 weaklyHypermeth 1.5850e-06 1.00000000 weaklyHypermeth 2.6768e-04 0.91734158 weaklyHypermeth 4.4614e-02 1.000000 weaklyHypermeth 0.0959989 1.3548e-03 weaklyHypermeth 0.169349 insignificant 0.895861 0.540498 0.32453163 8 0.906324 0.693248 0.213076 9.9246e-15 7.7213e-01 hypermethylated 9.9246e-13 1.0000e+00 hypermethylated 1.2836e-04 5.7109e-01 hypermethylated 5.8346e-03 1.0000e+00 hypermethylated 0.1979645 2.0839e-05 weaklyHypermeth 2.6049e-03 weaklyHypermeth 0.895861 0.773216 0.1758273 8 0.906324 0.784954 0.1213703 1.9620e-06 2.9909e-01 weaklyHypermeth 2.8029e-04 1.0000e+00 weaklyHypermeth 9.5051e-03 8.3352e-01 weaklyHypermeth 6.7894e-01 1.00000000 insignificant 0.0937485 1.9720e-03 weaklyHypermeth 0.281708 insignificant 0.540498 0.773216 -0.109907 8 0.693248 0.784954 -0.0917059 9.0562e-01 2.7378e-04 weaklyHypometh 1.0000e+00 7.2047e-03 weaklyHypometh 7.4717e-01 8.7740e-03 weaklyHypometh 1.00000000 1.9074e-01 insignificant -0.1042159 4.6780e-03 weaklyHypometh 0.1670720 insignificant chr9 80243516 80244516 33306 PSAT1 ENSG00000135069 0.146446 584 14 0.148626 494 14 0.139298 570 14 0.131597 521 11 0.095127 312 14 0.159726 803 14 0.149039 498 14 0.146261 516 14 0.140000 707 14 0.130231 544 14 0.18869 555 14 0.183546 472 14 0.0620590 504 14 0.0093023 183 5 0.124873 546 14 0.176653 381 14 0.159081 393 14 0.116861 673 13 0.099835 378 13 0.116658 760 14 0.223356 148 14 0.051462 383 12 0.16147 577 13 0.118738 261 13 0.096992 166 11 0.121894 638 14 0.129844 312 14 0.126217 231 12 0.095943 419 14 0.093609 628 14 0.1418332 909 14 0.17801 794 14 0.110943 571 14 0.021023 299 14 0.3333333 287 6 0.022727 116 6 0.103992 309 14 0.013439 484 14 0.027139 748 14 0.044214 577 14 0.041487 527 11 0.075038 456 11 0.074321 642 11 0.121166 0.120793 0.120825 0.111373 0.076948 0.135415 0.132151 0.131261 0.119986 0.107574 0.162316 0.145241 0.0552296 0.116305 0.113372 0.151584 0.130582 0.115885 0.090293 0.098371 0.175666 0.044130 0.143260 0.103621 0.089089 0.102942 0.111632 0.113288 0.077558 0.075405 0.1146497 0.148749 0.096634 0.022937 0.1196449 0.020308 0.0956877 0.0134865 0.025829 0.038778 0.036768 0.073931 0.065628 11 0.110833 0.124222 0.0077839 14 0.137704 0.13120 0.0065011 5.4193e-02 0.9916384 insignificant 1.0000000 1.00000 insignificant 0.02512606 0.99961873 weaklyHypermeth 1.00000 1.00000 insignificant 0.0029151 0.8567628 insignificant 1 insignificant 0.110833 0.075992 0.0634966 14 0.137704 0.069526 0.0681778 9.2740e-06 9.9684e-01 weaklyHypermeth 2.3185e-04 1.0000e+00 weaklyHypermeth 4.1051e-05 9.9802e-01 weaklyHypermeth 2.5657e-03 1.0000e+00 weaklyHypermeth 0.0302861 5.7412e-01 insignificant 1.0000e+00 insignificant 0.110833 0.064407 0.0779266 11 0.137704 0.049649 0.0880549 4.9713e-12 1.0000e+00 weaklyHypermeth 1.6571e-09 1.00000000 weaklyHypermeth 1.0855e-09 0.99999972 weaklyHypermeth 3.6182e-07 1.000000 weaklyHypermeth 0.0787559 5.4342e-05 weaklyHypermeth 0.018114 weaklyHypermeth 0.124222 0.075992 0.05558792 14 0.131203 0.069526 0.061677 5.5012e-03 9.8961e-01 weaklyHypermeth 7.7482e-02 1.0000e+00 weaklyHypermeth 2.9449e-02 9.8151e-01 weaklyHypermeth 4.7498e-01 1.0000e+00 insignificant 0.0273710 6.1460e-01 insignificant 1.0000e+00 insignificant 0.124222 0.064407 0.0793511 11 0.131203 0.049649 0.0815539 2.6258e-06 9.9999e-01 weaklyHypermeth 3.2823e-04 1.0000e+00 weaklyHypermeth 3.7542e-04 9.9973e-01 weaklyHypermeth 6.2569e-02 1.00000000 weaklyHypermeth 0.0758408 3.0066e-04 weaklyHypermeth 0.100219 insignificant 0.075992 0.064407 0.020430 11 0.069526 0.049649 0.0198771 5.0340e-01 9.0834e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.8518e-01 7.9751e-01 insignificant 1.00000000 1.0000e+00 insignificant 0.0484698 3.7981e-01 insignificant 1.0000000 insignificant chr9 83647916 83648916 33391 ENSG00000220979 0.902048 451 15 0.837888 99 8 0.620947 134 12 0.801375 385 15 0.903968 62 8 0.851981 486 15 0.618584 107 8 0.721414 113 6 0.715501 63 7 0.901164 103 9 0.87097 302 14 0.799573 62 6 0.7663690 95 8 NA 0 0 0.936298 106 10 0.728571 42 4 0.792228 79 8 0.896534 409 15 0.930787 123 9 0.830717 323 15 0.861111 55 4 0.805021 157 11 0.87571 199 15 0.909091 31 1 0.879383 126 12 0.923045 263 14 0.750614 118 8 0.739394 37 3 0.759466 107 8 0.891691 180 14 0.7428762 201 14 0.86611 495 16 0.707306 119 9 0.787146 112 14 0.8403258 273 15 0.756508 75 8 0.840152 71 8 0.814542 262 14 0.892088 386 15 0.905159 407 15 0.882943 394 15 0.869774 300 15 0.910115 438 15 0.926938 0.864479 0.579044 0.902524 0.912973 0.892681 0.855957 0.782818 0.843994 0.935238 0.912019 0.796997 0.9297555 NA 0.927313 0.900631 0.883775 0.904407 0.925398 0.831359 0.941915 0.872062 0.862869 0.897297 0.847078 0.946147 0.811616 0.683423 0.903457 0.928836 0.8983698 0.886062 0.783421 0.744231 0.8255879 0.858816 0.9404423 0.8438827 0.931065 0.933101 0.895409 0.894731 0.940924 3 0.864842 0.869477 -0.0096298 14 0.864470 0.87054 -0.0060744 9.0426e-01 0.6684700 insignificant 1.0000000 1.00000 insignificant 0.91438304 0.51200949 insignificant 1.00000 1.00000 insignificant -0.0216832 0.4743925 insignificant 1 insignificant 0.864613 0.821272 0.0431098 14 0.847529 0.815416 0.0321133 7.0800e-03 9.2632e-01 weaklyHypermeth 9.5675e-02 1.0000e+00 weaklyHypermeth 1.4010e-01 7.7686e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0209463 5.0543e-01 insignificant 1.0000e+00 insignificant 0.864613 0.920000 -0.0416039 14 0.847529 0.898474 -0.0509454 9.9353e-01 1.1760e-02 weaklyHypometh 1.0000e+00 0.84002850 insignificant 9.8403e-01 0.01302131 weaklyHypometh 1.0000e+00 0.780916 insignificant -0.0800728 2.5384e-03 weaklyHypometh 0.272907 insignificant 0.868878 0.821272 0.05291251 14 0.854363 0.815416 0.038947 2.7855e-03 9.7357e-01 weaklyHypermeth 4.2853e-02 1.0000e+00 weaklyHypermeth 1.6165e-01 9.3049e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0426295 1.6858e-01 insignificant 1.0000e+00 insignificant 0.868878 0.920000 -0.0284056 14 0.854363 0.898474 -0.0441117 9.9856e-01 1.9082e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9586e-01 1.9133e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0583896 1.6571e-02 weaklyHypometh 1.000000 insignificant 0.821272 0.920000 -0.082109 14 0.815416 0.898474 -0.0830587 9.9763e-01 4.5736e-05 weaklyHypometh 1.0000e+00 1.5771e-03 weaklyHypometh 9.9340e-01 1.3814e-02 weaklyHypometh 1.00000000 2.9393e-01 insignificant -0.1010191 3.9312e-03 weaklyHypometh 0.1456013 insignificant chr9 83973516 83974516 33399 ENSG00000217167 0.838562 233 7 0.793632 76 7 0.703564 135 10 0.902884 119 7 0.790123 84 9 0.754549 214 9 0.849048 66 8 0.711640 38 2 0.575714 38 5 0.777778 47 2 0.83565 125 9 0.718590 86 9 0.8425926 57 5 NA 0 0 0.781339 69 5 0.846667 36 4 0.689394 48 2 0.686479 173 7 0.875000 59 5 0.802338 152 9 0.894286 20 2 0.833333 29 2 0.79453 141 10 0.859127 70 6 0.900000 12 0 0.723152 105 6 0.832143 30 2 0.833333 22 1 0.859192 54 2 0.755461 102 9 0.8153186 93 6 0.74442 218 9 0.557459 89 7 0.687172 83 5 0.7958154 182 9 0.807576 41 5 0.888889 40 5 0.804401 107 6 0.881817 186 7 0.762803 238 7 0.913231 112 6 0.830051 237 7 0.803587 181 7 0.899202 0.915610 0.749885 0.896630 0.808824 0.825210 0.938375 0.766457 0.852941 0.981618 0.933824 0.884003 0.9080882 NA 0.847788 0.899020 0.829991 0.853470 0.961397 0.876709 0.810686 0.963235 0.867808 0.908088 0.801899 0.894983 0.871871 0.950980 0.914519 0.901012 0.8756668 0.868341 0.687241 0.825535 0.8150567 0.855763 1.0000000 0.9029125 0.875788 0.850063 0.905330 0.894719 0.848663 1 0.835040 0.842634 -0.0111186 6 0.786127 0.78953 -0.0034035 6.4468e-01 0.1100878 insignificant 1.0000000 1.00000 insignificant 0.96357258 0.01410116 weaklyHypometh 1.00000 1.00000 insignificant -0.0426977 0.0955608 lowCoverage 1 lowCoverage 0.835040 0.780443 0.0302999 6 0.786127 0.753641 0.0324852 1.1837e-01 9.0772e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.6360e-01 8.7246e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0207747 6.9798e-01 insignificant 1.0000e+00 insignificant 0.835040 0.902516 -0.0079952 6 0.786127 0.793465 -0.0073386 7.1158e-01 3.9687e-01 insignificant 1.0000e+00 1.00000000 insignificant 6.2006e-01 0.78706704 insignificant 1.0000e+00 1.000000 insignificant -0.0606377 9.9447e-02 insignificant 1.000000 insignificant 0.842634 0.780443 0.04586349 6 0.789530 0.753641 0.035889 9.0857e-03 6.6471e-01 weaklyHypermeth 1.2619e-01 1.0000e+00 insignificant 4.6963e-02 9.7233e-01 weaklyHypermeth 7.1156e-01 1.0000e+00 insignificant 0.0634724 2.5386e-01 lowCoverage 1.0000e+00 lowCoverage 0.842634 0.902516 0.0041854 6 0.789530 0.793465 -0.0039352 1.6433e-01 4.7095e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.0979e-01 9.9031e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0179400 5.8644e-01 lowCoverage 1.000000 lowCoverage 0.780443 0.902516 -0.034186 6 0.753641 0.793465 -0.0398238 7.4574e-01 1.6373e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.2908e-01 7.0801e-01 insignificant 1.00000000 1.0000e+00 insignificant -0.0814124 1.7715e-01 insignificant 1.0000000 insignificant chr9 84223516 84224516 33407 ENSG00000217167 0.789333 420 13 0.648749 220 13 0.682985 168 13 0.768251 226 13 0.699093 131 12 0.737917 392 13 0.657560 161 13 0.762729 197 11 0.754468 116 13 0.743114 132 12 0.74497 365 13 0.695665 81 9 0.8089127 177 13 0.7670940 62 6 0.774956 186 13 0.646062 53 5 0.567766 78 8 0.787297 248 13 0.735477 219 13 0.780461 366 13 0.821456 81 8 0.755311 112 12 0.73980 192 13 0.684188 99 9 0.740201 66 8 0.744027 216 13 0.763453 150 12 0.817949 33 3 0.800283 140 12 0.746349 211 9 0.7260672 212 13 0.69853 477 13 0.621190 164 12 0.557719 120 11 0.6484130 230 13 0.772727 116 8 0.631330 97 9 0.667784 281 13 0.775538 361 13 0.753961 455 13 0.781060 349 13 0.740208 391 13 0.787646 379 13 0.808061 0.678020 0.707782 0.816868 0.736589 0.742814 0.686778 0.771925 0.753040 0.776290 0.753292 0.710525 0.8217237 0.740286 0.797255 0.661609 0.601696 0.788957 0.748988 0.773354 0.810203 0.763834 0.768070 0.710920 0.704204 0.760804 0.767444 0.822222 0.845451 0.771255 0.7513304 0.761565 0.653312 0.597173 0.6554335 0.737237 0.6336819 0.7171466 0.803153 0.770400 0.801363 0.759672 0.799727 4 0.755316 0.780292 -0.0162166 13 0.770635 0.76457 0.0060662 8.9565e-01 0.0946614 insignificant 1.0000000 1.00000 insignificant 0.95318737 0.12513016 insignificant 1.00000 1.00000 insignificant -0.0254914 0.1786682 insignificant 1 insignificant 0.755010 0.687500 0.0756554 13 0.735348 0.663105 0.0722430 1.0543e-05 9.9999e-01 weaklyHypermeth 2.5714e-04 1.0000e+00 weaklyHypermeth 1.5120e-04 9.9997e-01 weaklyHypermeth 6.2998e-03 1.0000e+00 weaklyHypermeth 0.0777823 4.3544e-02 weaklyHypermeth 7.7757e-01 insignificant 0.755010 0.777778 -0.0360665 13 0.735348 0.773251 -0.0379035 9.9912e-01 2.2988e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant 9.9775e-01 0.00640408 weaklyHypometh 1.0000e+00 0.582189 insignificant -0.0400397 2.3562e-02 weaklyHypometh 1.000000 insignificant 0.780242 0.687500 0.09251603 13 0.753989 0.663105 0.090885 1.1732e-07 9.9999e-01 weaklyHypermeth 4.6930e-06 1.0000e+00 weaklyHypermeth 2.8160e-06 9.9999e-01 weaklyHypermeth 3.5200e-04 1.0000e+00 weaklyHypermeth 0.1032737 1.3708e-02 weaklyHypermeth 3.3435e-01 insignificant 0.780242 0.777778 -0.0163049 13 0.753989 0.773251 -0.0192619 7.9730e-01 1.2043e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.8621e-01 8.5827e-02 insignificant 1.0000e+00 1.00000000 insignificant -0.0145483 3.5480e-01 insignificant 1.000000 insignificant 0.687500 0.777778 -0.109188 13 0.663105 0.773251 -0.1101465 1.0000e+00 2.2972e-06 weaklyHypometh 1.0000e+00 1.3512e-04 weaklyHypometh 1.0000e+00 2.4259e-04 weaklyHypometh 1.00000000 1.4270e-02 weaklyHypometh -0.1178220 8.2289e-03 weaklyHypometh 0.2570346 insignificant chr9 85945016 85946016 33432 ENSG00000217785 0.094412 434 13 0.029376 265 13 0.222811 360 14 0.089286 387 11 0.131880 215 13 0.211713 810 14 0.050081 341 13 0.114760 316 13 0.071665 444 13 0.097639 663 13 0.16247 349 13 0.037132 584 13 0.1019986 513 14 0.2816545 286 7 0.054504 546 13 0.037162 367 13 0.067929 250 13 0.098409 421 13 0.233253 197 13 0.129473 523 13 0.076316 97 9 0.110048 338 13 0.20871 419 13 0.077362 137 12 0.159722 186 7 0.117712 508 13 0.105812 319 14 0.028509 107 10 0.050843 253 13 0.116444 497 13 0.1585414 681 13 0.12405 645 13 0.246643 258 13 0.142388 175 12 0.1200624 212 7 0.033374 193 12 0.141998 162 11 0.279725 340 14 0.179695 696 13 0.316196 523 13 0.164550 455 13 0.129444 587 13 0.122278 536 13 0.026560 0.036374 0.142989 0.009009 0.078693 0.065318 0.041497 0.108581 0.045752 0.040905 0.057542 0.048378 0.0405377 0.045297 0.031187 0.047304 0.038155 0.030982 0.126092 0.032195 0.036396 0.048957 0.064262 0.021512 0.017924 0.045567 0.024511 0.029204 0.019362 0.030379 0.0415731 0.044462 0.199976 0.110216 0.1340952 0.029754 0.1111239 0.1270592 0.091684 0.073163 0.054321 0.048363 0.110411 10 0.058397 0.057798 0.0116454 13 0.127603 0.11530 0.0123006 5.5402e-03 0.9555703 weaklyHypermeth 1.0000000 1.00000 insignificant 0.00041978 0.99173713 weaklyHypermeth 0.41978 1.00000 insignificant 0.0047075 0.8288766 insignificant 1 insignificant 0.058397 0.173881 -0.0967358 13 0.127603 0.200719 -0.0731167 9.8704e-01 6.3733e-09 weaklyHypometh 1.0000e+00 1.2747e-06 weaklyHypometh 8.9887e-01 5.1731e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0448182 2.9868e-01 insignificant 1.0000e+00 insignificant 0.058296 0.085449 -0.0227244 13 0.129136 0.217894 -0.0887583 9.7384e-01 6.2791e-06 weaklyHypometh 1.0000e+00 0.00156978 weaklyHypometh 9.9432e-01 0.00089859 weaklyHypometh 1.0000e+00 0.224647 insignificant -0.0665523 1.3730e-01 insignificant 1.000000 insignificant 0.057798 0.173881 -0.10899328 13 0.115302 0.200719 -0.085417 9.9956e-01 3.5853e-08 weaklyHypometh 1.0000e+00 8.9631e-06 weaklyHypometh 9.9472e-01 6.9675e-04 weaklyHypometh 1.0000e+00 2.3225e-01 insignificant -0.0495257 2.5016e-01 insignificant 1.0000e+00 insignificant 0.057826 0.085449 -0.0418970 13 0.121708 0.217894 -0.0961867 9.9976e-01 2.9281e-08 weaklyHypometh 1.0000e+00 2.9281e-05 weaklyHypometh 1.0000e+00 2.6549e-07 weaklyHypometh 1.0000e+00 0.00026549 weaklyHypometh -0.0712598 1.1479e-01 insignificant 1.000000 insignificant 0.174141 0.085449 0.062742 13 0.211870 0.217894 -0.0060240 1.1699e-01 8.4236e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.2125e-01 6.1471e-01 insignificant 1.00000000 1.0000e+00 insignificant -0.0217341 6.7820e-01 insignificant 1.0000000 insignificant chr9 88381016 88382016 33478 ENSG00000222293 0.793333 68 4 0.878248 202 5 0.866667 20 3 0.891799 111 5 0.900000 33 5 0.895051 182 5 0.894231 54 5 0.710000 69 5 0.900000 16 0 1.000000 14 0 0.91506 148 5 0.700000 20 3 0.9818182 36 3 0.7666667 22 3 1.000000 30 3 0.750000 13 0 1.000000 94 3 0.900000 22 3 0.973214 53 3 0.910766 79 5 0.975000 28 3 0.975000 51 3 0.92333 51 5 0.933333 18 2 0.910120 175 5 0.950604 225 5 0.933333 23 3 0.000000 2 0 0.883939 98 5 0.933722 194 5 0.9368049 295 5 0.91704 139 5 0.606840 107 5 0.224599 73 5 0.3668465 489 5 0.872444 110 5 0.505794 91 5 0.830385 210 5 0.822222 99 5 0.805187 91 5 0.921805 126 5 0.813971 53 3 0.736195 123 5 0.818694 0.909174 0.808559 0.930913 0.966216 0.886157 0.873571 0.788063 0.966216 1.000000 0.934083 0.569820 0.9729730 0.882883 1.000000 0.706333 0.979771 0.966216 0.961028 0.926015 0.962838 0.964527 0.912838 0.905405 0.920108 0.936651 0.900901 0.400597 0.870680 0.923260 0.9416527 0.880257 0.464841 0.283350 0.4330289 0.876907 0.4320571 0.7693345 0.842342 0.908384 0.950823 0.842458 0.669745 0 0.898134 0.923018 -0.0229881 5 0.883541 0.92651 -0.0429656 9.4147e-01 0.0152312 weaklyHypometh 1.0000000 1.00000 insignificant 0.50646556 0.26803491 insignificant 1.00000 1.00000 insignificant 0.0253237 0.7593731 lowCoverage 1 lowCoverage 0.898134 0.562037 0.3419329 5 0.883541 0.586724 0.2968168 1.2788e-16 1.0000e+00 hypermethylated 1.0657e-14 1.0000e+00 hypermethylated 3.2901e-07 1.0000e+00 hypermethylated 3.2901e-05 1.0000e+00 hypermethylated 0.3135248 2.8925e-02 lowCoverage 6.3174e-01 lowCoverage 0.898134 0.843496 0.0572301 5 0.883541 0.828202 0.0553384 3.4100e-02 8.4755e-01 weaklyHypermeth 1.0000e+00 1.00000000 insignificant 2.8321e-02 0.99835558 weaklyHypermeth 1.0000e+00 1.000000 insignificant 0.0614669 1.2658e-01 lowCoverage 1.000000 lowCoverage 0.923018 0.562037 0.35645533 5 0.926506 0.586724 0.339782 1.6841e-14 1.0000e+00 hypermethylated 1.2955e-12 1.0000e+00 hypermethylated 8.1018e-07 1.0000e+00 hypermethylated 1.1574e-04 1.0000e+00 hypermethylated 0.2882011 4.9619e-02 lowCoverage 9.1014e-01 lowCoverage 0.923018 0.843496 0.0773492 5 0.926506 0.828202 0.0983040 1.3570e-03 9.9936e-01 weaklyHypermeth 8.9870e-02 1.0000e+00 weaklyHypermeth 7.4258e-03 9.9534e-01 weaklyHypermeth 5.7122e-01 1.00000000 insignificant 0.0361432 6.7234e-01 lowCoverage 1.000000 lowCoverage 0.562037 0.843496 -0.292683 5 0.586724 0.828202 -0.2414785 9.9863e-01 8.9640e-05 hypomethylated 1.0000e+00 2.7163e-03 hypomethylated 9.9772e-01 3.1027e-03 weaklyHypometh 1.00000000 8.9267e-02 weaklyHypometh -0.2520578 6.0301e-02 lowCoverage 1.0000000 lowCoverage chr9 88764216 88765216 33499 GAS1 ENSG00000180447 0.951504 224 6 0.955180 98 4 0.701716 108 6 0.828704 78 4 0.971014 59 4 0.880746 305 6 0.950926 91 6 0.950142 165 6 0.933312 104 6 0.958648 104 6 0.91981 107 6 0.904059 54 6 0.9614413 157 6 NA 0 0 0.966989 79 6 0.683333 21 3 0.888889 42 6 0.860417 70 5 0.950632 106 6 0.915648 215 6 0.881746 71 6 0.880426 128 6 0.94124 114 6 0.805556 62 5 0.896970 35 5 0.931548 202 6 0.852421 131 6 0.946895 45 2 0.960988 129 5 0.647619 53 3 0.9298816 277 6 0.91238 376 6 0.543377 198 6 0.438828 88 6 0.6531676 185 5 0.846681 51 5 0.753333 36 2 0.467323 177 6 0.971681 151 6 0.974618 170 5 0.955914 125 6 0.922192 140 6 0.958763 133 6 0.944987 0.933530 0.704373 0.879875 0.940109 0.887690 0.940177 0.959133 0.921672 0.958966 0.933319 0.886442 0.9628738 NA 0.954602 0.681678 0.893377 0.866391 0.951711 0.920327 0.896153 0.895082 0.925097 0.864680 0.924728 0.931607 0.871113 0.938579 0.955827 0.773098 0.9285256 0.905484 0.583258 0.437906 0.8070017 0.864625 0.7421563 0.5070089 0.964207 0.974081 0.966595 0.916857 0.957697 3 0.918610 0.913740 0.0029678 6 0.914049 0.90895 0.0051015 5.8496e-01 0.8146208 insignificant 1.0000000 1.00000 insignificant 0.18947839 0.88685464 insignificant 1.00000 1.00000 insignificant 0.0194370 0.5415273 insignificant 1 insignificant 0.918610 0.646259 0.2662466 6 0.914049 0.602155 0.3118935 1.3202e-19 1.0000e+00 hypermethylated 1.4669e-17 1.0000e+00 hypermethylated 1.2647e-07 1.0000e+00 hypermethylated 1.5809e-05 1.0000e+00 hypermethylated 0.2846243 6.5563e-03 weaklyHypermeth 2.0664e-01 insignificant 0.918610 0.955494 -0.0383981 6 0.914049 0.955521 -0.0414722 9.9820e-01 4.6223e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant 9.9580e-01 0.05018713 insignificant 1.0000e+00 1.000000 insignificant -0.0548910 1.7151e-02 weaklyHypometh 0.816705 insignificant 0.913740 0.646259 0.26250897 6 0.908948 0.602155 0.306792 3.2477e-14 1.0000e+00 hypermethylated 2.3198e-12 1.0000e+00 hypermethylated 4.3135e-05 9.9999e-01 hypermethylated 2.5374e-03 1.0000e+00 hypermethylated 0.2651874 8.4391e-03 weaklyHypermeth 2.4112e-01 insignificant 0.913740 0.955494 -0.0420211 6 0.908948 0.955521 -0.0465736 9.9970e-01 2.2194e-03 weaklyHypometh 1.0000e+00 3.7322e-01 insignificant 9.9940e-01 4.5187e-03 weaklyHypometh 1.0000e+00 1.00000000 insignificant -0.0743280 1.4514e-02 weaklyHypometh 1.000000 insignificant 0.646259 0.955494 -0.309033 6 0.602155 0.955521 -0.3533657 1.0000e+00 5.5659e-09 hypomethylated 1.0000e+00 7.9513e-07 hypomethylated 1.0000e+00 5.0337e-06 hypomethylated 1.00000000 1.7882e-03 hypomethylated -0.3395154 3.4831e-03 weaklyHypometh 0.1453999 insignificant chr9 88924416 88925416 33510 ENSG00000218250 0.888687 51 3 0.731410 61 3 0.808333 24 2 0.710816 69 5 0.341414 25 2 0.737599 110 5 0.444444 26 2 0.961616 52 2 0.500000 31 2 0.577778 17 1 0.91091 145 5 0.406250 17 2 0.5541667 31 2 0.4833333 15 1 0.829231 27 2 0.708333 7 0 0.625000 6 0 0.609439 66 5 0.921875 62 2 0.923395 75 5 0.971429 25 3 0.952381 17 2 0.84762 48 5 0.777778 21 2 0.817308 42 2 0.882542 92 5 0.803788 48 2 0.750000 9 0 0.938095 55 5 0.896600 88 5 0.9035000 96 5 0.77837 98 6 0.735750 57 5 0.752532 62 5 0.8382066 38 2 0.250000 4 0 0.584848 21 2 0.644762 93 5 0.793651 61 5 0.698571 59 2 0.697809 85 5 0.741228 26 1 0.470679 70 5 0.912167 0.676792 0.725000 0.872054 0.836547 0.910417 0.825758 0.903466 0.738636 0.931000 0.852324 0.781250 0.8617424 0.409091 0.828671 0.706883 0.284091 0.821109 0.879972 0.896598 0.925325 0.920544 0.928571 0.926768 0.862762 0.867513 0.794938 0.995219 0.847944 0.978489 0.8600947 0.891660 0.701864 0.706575 0.7494712 0.840376 0.7706612 0.7193506 0.938131 0.805682 0.952357 0.949761 0.770412 0 0.824044 0.887324 -0.0616793 2 0.663926 0.76540 -0.1014771 9.9912e-01 0.0427237 lowCoverage 1.0000000 1.00000 lowCoverage 0.99996518 0.00780054 lowCoverage 1.00000 1.00000 lowCoverage -0.1762496 0.0010047 lowCoverage 1 lowCoverage 0.824945 0.730909 0.0915127 2 0.758773 0.760985 -0.0022123 5.0549e-02 8.8958e-01 lowCoverage 5.8102e-01 1.0000e+00 lowCoverage 2.8964e-01 9.6611e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0493516 6.1790e-01 lowCoverage 1.0000e+00 lowCoverage 0.825328 0.797342 0.0117556 2 0.788926 0.657095 0.1318314 5.5049e-01 8.5071e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 7.8869e-01 0.62652315 lowCoverage 1.0000e+00 1.000000 lowCoverage 0.0033139 9.6313e-01 lowCoverage 1.000000 lowCoverage 0.888715 0.730909 0.15884210 5 0.874747 0.760985 0.113762 1.3057e-05 9.9974e-01 weaklyHypermeth 3.6269e-04 1.0000e+00 weaklyHypermeth 3.1266e-04 9.9996e-01 weaklyHypermeth 1.2748e-02 1.0000e+00 weaklyHypermeth 0.2256012 4.4285e-02 lowCoverage 8.3557e-01 lowCoverage 0.888715 0.800000 0.0870807 5 0.874747 0.750966 0.1237812 3.3997e-03 9.9728e-01 weaklyHypermeth 1.6999e-01 1.0000e+00 insignificant 3.2351e-02 9.9893e-01 weaklyHypermeth 1.0000e+00 1.00000000 insignificant 0.1795635 2.7367e-02 lowCoverage 1.000000 lowCoverage 0.730909 0.800000 -0.050232 5 0.760985 0.750966 0.0100196 8.3219e-01 6.6611e-02 insignificant 1.0000e+00 7.5694e-01 insignificant 9.8508e-01 9.0216e-02 insignificant 1.00000000 1.0000e+00 insignificant -0.0460377 6.6115e-01 lowCoverage 1.0000000 lowCoverage chr9 89283516 89284516 33530 ENSG00000218627 0.652635 189 7 0.488209 171 9 0.664835 75 8 0.814018 170 8 0.701004 168 9 0.665906 268 9 0.747880 154 8 0.715399 205 9 0.617249 134 9 0.835094 107 9 0.69316 304 9 0.746914 49 4 0.6191314 110 8 0.6228175 62 7 0.592954 144 9 0.765152 56 4 0.916667 19 0 0.498853 226 7 0.818841 61 3 0.803706 122 9 0.717532 39 3 0.939899 47 6 0.65656 129 9 0.602356 104 8 0.655385 122 6 0.711945 177 8 0.648638 102 8 0.842125 68 8 0.707626 162 9 0.761730 132 6 0.8107989 144 9 0.68880 134 9 0.662981 188 9 0.724298 89 8 0.5597855 152 8 0.656250 25 0 0.594801 131 9 0.618849 114 9 0.814340 126 7 0.754044 146 8 0.664683 157 6 0.804179 120 8 0.747572 140 7 0.736737 0.634200 0.621660 0.802281 0.702840 0.749114 0.681155 0.683998 0.718615 0.831820 0.752221 0.656546 0.6495602 0.734404 0.717739 0.778509 0.892380 0.769713 0.848298 0.765779 0.739462 0.949521 0.746905 0.741212 0.733034 0.577749 0.601120 0.875489 0.844135 0.785451 0.7848517 0.779249 0.616564 0.661044 0.6537359 0.597674 0.6866230 0.6159037 0.772727 0.738932 0.730233 0.772451 0.734013 0 0.756263 0.774099 -0.0160221 9 0.607670 0.65517 -0.0475022 9.3608e-01 0.1797380 insignificant 1.0000000 1.00000 insignificant 0.99468856 0.26956279 insignificant 1.00000 1.00000 insignificant -0.0295946 0.4321215 insignificant 1 insignificant 0.756718 0.669528 0.0777430 9 0.662696 0.612800 0.0498959 5.5068e-05 9.4722e-01 weaklyHypermeth 1.1971e-03 1.0000e+00 weaklyHypermeth 6.1442e-04 9.8415e-01 weaklyHypermeth 1.9820e-02 1.0000e+00 weaklyHypermeth 0.0628604 8.4013e-02 insignificant 1.0000e+00 insignificant 0.759119 0.750363 -0.0190909 7 0.699312 0.803036 -0.1037236 9.1544e-01 1.7562e-01 insignificant 1.0000e+00 1.00000000 insignificant 8.7796e-01 0.33991053 insignificant 1.0000e+00 1.000000 insignificant -0.0579420 1.3658e-01 insignificant 1.000000 insignificant 0.774908 0.669528 0.09096139 9 0.679045 0.612800 0.066245 1.9693e-05 9.6980e-01 weaklyHypermeth 5.3225e-04 1.0000e+00 weaklyHypermeth 1.4688e-03 9.9273e-01 weaklyHypermeth 3.7662e-02 1.0000e+00 weaklyHypermeth 0.0924551 2.2333e-02 weaklyHypermeth 4.9628e-01 insignificant 0.777612 0.750363 -0.0043865 7 0.720689 0.803036 -0.0823462 6.9992e-01 6.4260e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.7968e-01 8.8408e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0283474 4.7367e-01 insignificant 1.000000 insignificant 0.669553 0.750000 -0.102034 7 0.596640 0.783339 -0.1866987 1.0000e+00 1.5689e-05 weaklyHypometh 1.0000e+00 6.5369e-04 weaklyHypometh 1.0000e+00 3.0832e-04 weaklyHypometh 1.00000000 1.6227e-02 weaklyHypometh -0.1208025 8.5268e-03 weaklyHypometh 0.2570346 insignificant chr9 89355916 89356916 33541 ENSG00000219928 0.927601 210 5 0.748699 313 4 0.601667 119 4 0.916504 163 5 0.577895 86 3 0.867532 250 5 0.722857 73 5 0.781610 203 4 0.846131 104 5 0.893757 75 4 0.67210 218 4 0.591667 27 2 0.9197144 124 4 0.8822115 69 4 0.746656 164 4 0.411429 24 4 0.000000 3 0 0.615780 205 5 0.925407 315 4 0.856054 247 6 0.795659 80 5 0.714762 54 4 0.74336 137 5 0.848934 88 5 0.871429 62 4 0.835349 310 4 0.769086 135 4 0.740000 52 5 0.724482 346 4 0.771084 379 4 0.9071195 517 4 0.84949 256 6 0.802214 164 4 0.708681 170 5 0.7886905 204 5 1.000000 22 1 0.676070 102 5 0.854418 330 6 0.761517 159 5 0.788084 120 5 0.792582 153 5 0.790108 116 4 0.921039 157 5 0.903716 0.828189 0.776944 0.883699 0.709056 0.914501 0.817199 0.864102 0.869806 0.916200 0.834734 0.752696 0.9115091 0.861650 0.926618 0.403025 NA 0.832196 0.892988 0.925939 0.881699 0.865966 0.880897 0.905215 0.950840 0.892845 0.866436 0.866578 0.894156 0.904919 0.8845314 0.914487 0.813857 0.826338 0.9468487 NA 0.8323433 0.9333600 0.891298 0.875574 0.855726 0.778015 0.921604 4 0.864078 0.889901 -0.0282611 4 0.683897 0.70149 -0.0175960 8.4250e-01 0.1020565 lowCoverage 1.0000000 1.00000 lowCoverage 0.99705841 0.02025312 lowCoverage 1.00000 1.00000 lowCoverage -0.0722991 0.1890108 lowCoverage 1 lowCoverage 0.864367 0.877016 -0.0134130 4 0.797880 0.793744 0.0041358 4.2302e-01 3.2380e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 4.9646e-01 6.2962e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0797485 2.6292e-01 lowCoverage 1.0000e+00 lowCoverage 0.864367 0.868085 0.0032719 4 0.797880 0.801435 -0.0035554 7.2750e-01 7.4115e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 8.6470e-01 0.66181340 lowCoverage 1.0000e+00 1.000000 lowCoverage -0.0854025 1.5201e-01 lowCoverage 1.000000 lowCoverage 0.890638 0.877016 0.01708717 4 0.818409 0.793744 0.024665 3.6244e-01 7.6539e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 1.2621e-01 9.3176e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0074494 8.8729e-01 lowCoverage 1.0000e+00 lowCoverage 0.890638 0.868085 0.0311079 4 0.818409 0.801435 0.0169733 9.0928e-02 7.9537e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 1.7772e-01 9.3799e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage -0.0131035 7.0709e-01 lowCoverage 1.000000 lowCoverage 0.877016 0.868085 0.016519 5 0.793744 0.801435 -0.0076912 4.4978e-01 3.9583e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.6438e-01 2.8771e-01 insignificant 1.00000000 1.0000e+00 insignificant -0.0056541 9.2053e-01 lowCoverage 1.0000000 lowCoverage chr9 91411016 91412016 33608 GADD45G ENSG00000130222 0.071881 503 9 0.085664 475 9 0.084074 497 9 0.080588 486 9 0.059160 310 9 0.145264 817 9 0.086377 442 9 0.061087 690 9 0.056214 685 9 0.091382 840 9 0.10283 356 9 0.109368 556 9 0.0158949 596 9 0.1160622 475 9 0.056239 801 9 0.110100 471 9 0.051174 206 9 0.075039 537 9 0.019011 332 9 0.070806 575 9 0.225639 123 10 0.020286 424 9 0.11686 269 9 0.060032 269 9 0.171720 215 9 0.063310 532 9 0.063564 464 9 0.066970 362 9 0.093205 454 9 0.026745 775 9 0.0302674 730 9 0.15697 522 9 0.354410 397 9 0.095495 203 9 0.0055556 127 6 0.012346 37 1 0.126633 385 9 0.436153 414 9 0.025185 632 9 0.029810 479 9 0.021217 443 9 0.024071 449 9 0.053699 499 9 0.074129 0.085679 0.083719 0.078346 0.087736 0.145832 0.085048 0.059839 0.060139 0.110819 0.140418 0.107366 0.0170126 0.118148 0.057118 0.107578 0.049339 0.072664 0.022057 0.076911 0.215553 0.019691 0.099445 0.063882 0.078731 0.068089 0.064221 0.083555 0.094597 0.030372 0.0294832 0.151924 0.358618 0.094086 0.0088725 0.019717 0.1434646 0.4273138 0.024843 0.028916 0.022883 0.023707 0.052521 9 0.083873 0.066745 0.0138882 9 0.059321 0.12098 -0.0616591 3.0406e-01 0.9531858 insignificant 1.0000000 1.00000 insignificant 0.85976330 0.62858796 insignificant 1.00000 1.00000 insignificant -0.0138865 0.4955959 insignificant 1 insignificant 0.083944 0.264875 -0.1708831 9 0.077117 0.227757 -0.1506408 1.0000e+00 8.9823e-25 weaklyHypometh 1.0000e+00 4.4912e-22 weaklyHypometh 9.9923e-01 1.6349e-03 weaklyHypometh 1.0000e+00 3.2698e-01 insignificant -0.0943546 2.5909e-01 insignificant 1.0000e+00 insignificant 0.083944 0.025580 0.0489822 9 0.077117 0.028492 0.0486251 4.0295e-07 9.9998e-01 weaklyHypermeth 6.7158e-05 1.00000000 weaklyHypermeth 1.5719e-06 0.99999235 weaklyHypermeth 3.1438e-04 1.000000 weaklyHypermeth 0.0466144 1.0087e-04 weaklyHypermeth 0.025217 weaklyHypermeth 0.066029 0.264875 -0.19098847 9 0.062988 0.227757 -0.164770 1.0000e+00 1.4199e-14 weaklyHypometh 1.0000e+00 7.0997e-12 weaklyHypometh 9.9939e-01 2.4984e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0804681 3.3448e-01 insignificant 1.0000e+00 insignificant 0.066041 0.025590 0.0373299 9 0.069986 0.031657 0.0383291 3.1580e-03 9.9892e-01 weaklyHypermeth 1.6999e-01 1.0000e+00 insignificant 5.2373e-05 9.9991e-01 weaklyHypermeth 1.7458e-02 1.00000000 weaklyHypermeth 0.0605009 8.3933e-03 weaklyHypermeth 0.763030 insignificant 0.265045 0.025590 0.230143 9 0.253064 0.031657 0.2214065 7.2652e-11 1.0000e+00 hypermethylated 3.6326e-08 1.0000e+00 hypermethylated 1.0480e-03 9.9997e-01 weaklyHypermeth 0.34088283 1.0000e+00 insignificant 0.1409690 1.1518e-01 insignificant 1.0000000 insignificant chr9 92967716 92968716 33628 SYK ENSG00000165025 0.655519 102 4 0.671026 58 5 0.620000 44 4 0.692532 75 4 1.000000 13 1 0.784575 137 4 0.366667 27 4 0.705637 55 4 0.625714 31 4 0.632500 44 3 0.66176 65 4 0.442857 19 2 0.6878759 77 4 NA 0 0 0.772006 42 4 0.500000 4 0 0.633333 15 1 0.729036 96 4 0.752340 69 5 0.731925 142 5 0.952778 31 4 0.778986 68 4 0.77186 74 5 0.881429 35 4 0.646667 35 2 0.824771 115 5 0.726573 61 4 0.475000 16 1 0.728273 71 4 0.772143 107 5 0.6917506 170 5 0.80574 146 4 0.830159 71 4 0.770238 57 4 0.8025000 147 5 0.833333 12 1 0.723636 43 4 0.834319 99 5 0.549758 81 4 0.604584 98 5 0.724691 119 4 0.779545 39 4 0.640618 113 4 0.803374 0.754011 0.711966 0.802253 0.892047 0.801117 0.482906 0.854764 0.761538 0.670833 0.702268 0.377289 0.7077068 NA 0.651441 0.279127 0.602564 0.738344 0.759635 0.814181 0.977920 0.877804 0.762990 0.860256 0.561538 0.867271 0.720145 0.699040 0.684239 0.865187 0.7757056 0.834300 0.848596 0.702991 0.7503205 0.912772 0.7687646 0.8445329 0.662436 0.758225 0.801220 0.787639 0.791928 0 0.751570 0.804090 -0.0638109 5 0.708247 0.77577 -0.0675241 9.9740e-01 0.0010589 weaklyHypometh 1.0000000 0.26472 insignificant 0.99964197 0.00095149 weaklyHypometh 1.00000 0.47574 insignificant -0.0880700 0.0699095 lowCoverage 1 lowCoverage 0.751570 0.857809 -0.0943771 5 0.708247 0.810464 -0.1022173 9.9036e-01 1.4135e-04 weaklyHypometh 1.0000e+00 2.0193e-02 weaklyHypometh 9.9871e-01 2.1814e-05 weaklyHypometh 1.0000e+00 7.2713e-03 weaklyHypometh -0.1324360 1.2355e-03 lowCoverage 6.8641e-02 lowCoverage 0.751570 0.740000 -0.0060818 4 0.708247 0.633880 0.0743672 3.5201e-03 4.5287e-01 lowCoverage 1.9556e-01 1.00000000 lowCoverage 2.0829e-01 0.16846911 lowCoverage 1.0000e+00 1.000000 lowCoverage 0.0067557 8.9870e-01 lowCoverage 1.000000 lowCoverage 0.804090 0.857809 -0.02873270 5 0.775771 0.810464 -0.034693 6.5608e-01 6.2521e-03 weaklyHypometh 1.0000e+00 7.8151e-01 insignificant 8.9197e-01 2.0734e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0443660 2.7530e-01 lowCoverage 1.0000e+00 lowCoverage 0.804090 0.740000 0.0581430 4 0.775771 0.633880 0.1418912 4.1541e-04 9.9552e-01 lowCoverage 3.4618e-02 1.0000e+00 lowCoverage 2.0120e-02 9.9231e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 0.0948257 1.0973e-01 lowCoverage 1.000000 lowCoverage 0.857809 0.740000 0.082454 4 0.810464 0.633880 0.1765844 2.2019e-06 9.7468e-01 lowCoverage 5.5048e-04 1.0000e+00 lowCoverage 1.3635e-03 9.7643e-01 lowCoverage 0.34088283 1.0000e+00 lowCoverage 0.1391917 2.3865e-02 lowCoverage 0.5188145 lowCoverage chr9 93601816 93602816 33652 ENSG00000217636 0.657409 237 8 0.742239 136 8 0.662368 153 7 0.816220 125 8 0.643716 52 5 0.666420 356 8 0.676640 112 8 0.833390 118 6 0.529553 89 7 0.721766 121 7 0.71799 185 8 0.666667 64 5 0.7761968 120 8 NA 0 0 0.758478 111 8 0.516071 48 5 0.569900 69 6 0.823013 166 8 0.711722 152 8 0.650585 302 8 0.785491 66 7 0.745690 106 7 0.68401 194 8 0.747917 65 7 0.771635 51 7 0.747205 296 8 0.695610 82 7 0.677083 41 3 0.672992 178 8 0.726422 277 8 0.7609339 304 8 0.69418 343 8 0.632631 189 8 0.634049 93 6 0.5676564 135 8 0.572321 43 6 0.679396 88 7 0.622707 236 8 0.810521 224 8 0.909362 173 8 0.749962 180 8 0.768048 277 8 0.905493 140 8 0.628453 0.716651 0.676552 0.803968 0.655983 0.630758 0.656094 0.877471 0.555754 0.691872 0.711950 0.635684 0.7323755 NA 0.724142 0.572222 0.558882 0.786916 0.684268 0.602790 0.733120 0.701604 0.694683 0.696795 0.741026 0.696323 0.627089 0.685185 0.647161 0.679626 0.7249441 0.648653 0.590728 0.623511 0.4464575 0.614733 0.6358865 0.5800568 0.800017 0.915469 0.741223 0.707090 0.902215 5 0.710972 0.745881 -0.0199184 8 0.705541 0.72737 -0.0218251 8.9589e-01 0.0617809 insignificant 1.0000000 1.00000 insignificant 0.85432760 0.02899727 weaklyHypometh 1.00000 1.00000 insignificant -0.0341667 0.1617336 insignificant 1 insignificant 0.710972 0.653061 0.0726027 8 0.705541 0.632954 0.0725873 5.1076e-05 9.9564e-01 weaklyHypermeth 1.1350e-03 1.0000e+00 weaklyHypermeth 7.8715e-04 9.8984e-01 weaklyHypermeth 2.1274e-02 1.0000e+00 weaklyHypermeth 0.0734706 1.3608e-02 weaklyHypermeth 3.7170e-01 insignificant 0.710972 0.764588 -0.0881180 8 0.705541 0.793196 -0.0876552 9.9999e-01 3.0692e-04 weaklyHypometh 1.0000e+00 0.06138395 weaklyHypometh 1.0000e+00 0.00024672 weaklyHypometh 1.0000e+00 0.091162 weaklyHypometh -0.1370801 9.5583e-03 weaklyHypometh 0.581578 insignificant 0.745881 0.653061 0.09672908 8 0.727366 0.632954 0.094412 6.2604e-07 1.0000e+00 weaklyHypermeth 2.1588e-05 1.0000e+00 weaklyHypermeth 3.7724e-05 1.0000e+00 weaklyHypermeth 2.4345e-03 1.0000e+00 weaklyHypermeth 0.1076373 4.6237e-04 weaklyHypermeth 3.2956e-02 weaklyHypermeth 0.745881 0.764588 -0.0724261 8 0.727366 0.793196 -0.0658301 9.9637e-01 5.6544e-03 weaklyHypometh 1.0000e+00 5.6544e-01 insignificant 9.9754e-01 9.2474e-03 weaklyHypometh 1.0000e+00 1.00000000 insignificant -0.1029134 3.4272e-02 weaklyHypometh 1.000000 insignificant 0.653061 0.764588 -0.166835 8 0.632954 0.793196 -0.1602425 1.0000e+00 2.9593e-07 weaklyHypometh 1.0000e+00 2.6902e-05 weaklyHypometh 1.0000e+00 1.5123e-05 weaklyHypometh 1.00000000 2.5205e-03 weaklyHypometh -0.2105507 1.3843e-03 weaklyHypometh 0.0865207 weaklyHypometh chr9 93659616 93660616 33659 ENSG00000217636 0.430556 85 3 0.422177 210 6 0.422621 203 6 0.358571 31 4 0.423396 107 6 0.593639 95 5 0.355562 240 6 0.349877 122 6 0.342844 217 6 0.455952 133 6 0.59544 174 6 0.541118 173 6 0.1355104 245 6 NA 0 0 0.339286 169 6 0.395501 146 6 0.146554 223 6 0.549074 41 4 0.193000 142 6 0.177200 108 5 0.561111 61 5 0.028571 25 3 0.36739 115 6 0.514583 70 6 0.361111 15 0 0.359388 189 6 0.510029 80 6 0.750000 59 5 0.394513 139 6 0.279271 219 6 0.2760803 346 6 0.69841 169 6 0.451790 236 6 0.586165 144 6 0.5562386 158 5 0.018519 22 1 0.803707 99 5 0.097461 190 6 0.104762 85 3 0.159636 85 4 0.163333 35 3 0.208014 60 3 0.270833 42 4 0.596993 0.484513 0.521056 0.355166 0.497743 0.608314 0.430821 0.460672 0.380390 0.490693 0.648803 0.569991 0.1811418 NA 0.400000 0.513326 0.162181 0.534722 0.232602 0.170761 0.439646 0.052850 0.404348 0.580208 0.416667 0.485904 0.596625 0.803030 0.489223 0.348996 0.3568931 0.692556 0.504828 0.627400 0.6955311 0.033670 0.8671229 0.1272418 0.057900 0.206959 0.118687 0.108599 0.215909 3 0.385475 0.435777 -0.0426206 6 0.361402 0.39869 -0.0372858 9.5866e-01 0.1349800 insignificant 1.0000000 1.00000 insignificant 0.93563850 0.39358534 insignificant 1.00000 1.00000 insignificant -0.0446234 0.5037628 insignificant 1 insignificant 0.385475 0.480565 -0.0714840 6 0.361402 0.451894 -0.0904922 9.9664e-01 2.9404e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 7.7561e-01 5.5107e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0385653 7.7374e-01 lowCoverage 1.0000e+00 lowCoverage 0.385475 0.133550 0.2947845 3 0.361402 0.165000 0.1964027 6.3835e-08 9.9335e-01 lowCoverage 1.2767e-05 1.00000000 lowCoverage 1.3451e-06 0.99960797 lowCoverage 3.1438e-04 1.000000 lowCoverage 0.1990990 2.6145e-04 lowCoverage 0.052290 lowCoverage 0.435777 0.480565 -0.02987752 6 0.398688 0.451894 -0.053206 9.2187e-01 3.2274e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.5320e-01 7.3872e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0060580 9.6574e-01 lowCoverage 1.0000e+00 lowCoverage 0.435777 0.133550 0.3326023 3 0.398688 0.165000 0.2336885 1.6636e-08 9.9942e-01 lowCoverage 4.1591e-06 1.0000e+00 lowCoverage 5.0712e-06 9.9982e-01 lowCoverage 2.5356e-03 1.00000000 lowCoverage 0.2437224 1.6484e-03 lowCoverage 0.274726 lowCoverage 0.480565 0.133550 0.357420 3 0.451894 0.165000 0.2868949 1.0423e-04 9.9958e-01 lowCoverage 2.0845e-02 1.0000e+00 lowCoverage 8.3238e-03 9.9563e-01 lowCoverage 1.00000000 1.0000e+00 lowCoverage 0.2376643 1.1458e-01 lowCoverage 1.0000000 lowCoverage chr9 93688716 93689716 33663 ENSG00000217636 0.035432 237 5 0.053879 160 5 0.269173 157 5 0.070833 62 5 0.016667 76 5 0.059907 280 5 0.197051 169 5 0.018166 171 5 0.015873 211 5 0.000000 166 5 0.15469 155 5 0.172547 152 5 0.0066667 180 5 NA 0 0 0.056030 174 5 0.028079 132 5 0.015638 187 5 0.066667 131 5 0.014286 90 5 0.010995 257 5 0.513627 58 4 0.175000 51 5 0.16874 200 5 0.056364 61 5 0.044444 34 3 0.012137 168 5 0.019355 113 5 0.066667 49 5 0.022222 94 5 0.014447 217 5 0.0068333 302 5 0.26651 236 5 0.963607 160 5 0.912194 88 5 0.6666667 137 2 0.801667 66 5 0.935027 106 5 0.859066 198 5 0.203801 217 5 0.371817 206 5 0.058304 149 5 0.073460 212 5 0.152049 169 5 0.034623 0.053436 0.281118 0.068890 0.017857 0.062504 0.210030 0.019906 0.017380 0.000000 0.161272 0.174493 0.0077031 NA 0.059581 0.031244 0.014706 0.072829 0.012005 0.012071 0.508999 0.171218 0.182907 0.063445 0.049486 0.012716 0.022364 0.066527 0.019141 0.014639 0.0067612 0.266148 0.964795 0.910997 0.7677258 0.812710 0.9418605 0.8682649 0.205122 0.363066 0.063269 0.076082 0.150076 5 0.063870 0.102337 -0.0382879 5 0.063704 0.10137 -0.0376668 9.9051e-01 0.0788793 insignificant 1.0000000 1.00000 insignificant 0.64844297 0.48049593 insignificant 1.00000 1.00000 insignificant -0.0474105 0.3276642 lowCoverage 1 lowCoverage 0.063870 0.908609 -0.8527295 5 0.063704 0.912418 -0.8487144 1.0000e+00 9.0369e-70 hypomethylated 1.0000e+00 9.0369e-67 hypomethylated 1.0000e+00 6.6886e-13 hypomethylated 1.0000e+00 6.6886e-10 hypomethylated -0.7899194 1.3198e-06 lowCoverage 2.1997e-04 lowCoverage 0.063870 0.181532 -0.1157492 5 0.063704 0.187089 -0.1233856 9.8972e-01 1.5443e-06 weaklyHypometh 1.0000e+00 0.00051475 weaklyHypometh 9.9257e-01 0.00351940 weaklyHypometh 1.0000e+00 0.439925 insignificant -0.1054344 1.3753e-01 lowCoverage 1.000000 lowCoverage 0.102337 0.908609 -0.81718123 5 0.101370 0.912418 -0.811048 1.0000e+00 3.1009e-38 hypomethylated 1.0000e+00 3.1009e-35 hypomethylated 1.0000e+00 2.6726e-11 hypomethylated 1.0000e+00 2.6726e-08 hypomethylated -0.7425089 1.5552e-08 lowCoverage 5.1841e-06 lowCoverage 0.102337 0.181532 -0.0773863 5 0.101370 0.187089 -0.0857188 8.1734e-01 1.1364e-02 weaklyHypometh 1.0000e+00 8.1170e-01 insignificant 9.5171e-01 4.3531e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant -0.0580239 4.3694e-01 lowCoverage 1.000000 lowCoverage 0.908609 0.181532 0.725175 5 0.912418 0.187089 0.7253287 6.9113e-22 1.0000e+00 hypermethylated 6.9113e-19 1.0000e+00 hypermethylated 2.9977e-07 1.0000e+00 hypermethylated 0.00018363 1.0000e+00 hypermethylated 0.6844850 1.2017e-05 lowCoverage 0.0030042 lowCoverage chr9 93738116 93739116 33672 ENSG00000217636 0.850746 494 15 0.699028 180 10 0.804153 154 11 0.892352 438 15 0.932277 74 6 0.833139 415 15 0.627247 119 11 0.949006 109 7 0.691865 75 5 0.882657 87 9 0.87694 266 15 0.814560 59 5 0.8755921 154 11 NA 0 0 0.798503 82 7 0.918519 41 5 0.858205 64 8 0.919812 449 15 0.838477 148 14 0.785055 296 15 0.920635 50 4 0.875058 98 10 0.86950 241 16 0.750000 48 3 0.909668 87 6 0.831173 256 14 0.923087 93 7 0.675000 23 1 0.882648 85 9 0.882002 266 15 0.8533108 201 13 0.80222 509 16 0.841180 155 10 0.792756 160 10 0.7365283 276 15 0.791111 98 13 0.928211 55 5 0.812769 282 15 0.882276 406 15 0.895672 504 15 0.872359 376 15 0.850857 333 15 0.943036 446 15 0.867653 0.805919 0.848839 0.912419 0.908639 0.850303 0.850835 0.968430 0.827546 0.854978 0.904618 0.840829 0.9324792 NA 0.877671 0.916770 0.873409 0.922400 0.888090 0.857002 0.985597 0.918355 0.902067 0.903292 0.894270 0.902618 0.934867 0.808455 0.843585 0.904146 0.9250513 0.867119 0.862393 0.770974 0.7958914 0.812963 0.9266118 0.8671865 0.919505 0.932305 0.892860 0.915169 0.953340 1 0.866361 0.866428 -0.0090055 14 0.855131 0.86120 -0.0060674 9.4734e-01 0.3813562 insignificant 1.0000000 1.00000 insignificant 0.99770578 0.05609351 insignificant 1.00000 1.00000 insignificant -0.0137465 0.6406208 insignificant 1 insignificant 0.866325 0.815789 0.0461955 15 0.846077 0.803078 0.0429990 8.1868e-04 9.8688e-01 weaklyHypermeth 1.2995e-02 1.0000e+00 weaklyHypermeth 5.5744e-02 9.8744e-01 insignificant 8.0789e-01 1.0000e+00 insignificant 0.0170199 6.1473e-01 insignificant 1.0000e+00 insignificant 0.866325 0.908475 -0.0454638 14 0.846077 0.896873 -0.0507960 9.9998e-01 3.7809e-04 weaklyHypometh 1.0000e+00 0.06301529 weaklyHypometh 9.8290e-01 0.01566625 weaklyHypometh 1.0000e+00 0.870347 insignificant -0.0547276 4.2859e-02 weaklyHypometh 1.000000 insignificant 0.866359 0.815789 0.05902859 14 0.852524 0.803078 0.049446 1.3398e-04 9.7257e-01 weaklyHypermeth 2.7089e-03 1.0000e+00 weaklyHypermeth 3.5961e-03 9.9926e-01 weaklyHypermeth 8.3631e-02 1.0000e+00 weaklyHypermeth 0.0307664 3.8213e-01 insignificant 1.0000e+00 insignificant 0.866359 0.908475 -0.0357996 14 0.852524 0.896873 -0.0443494 9.9812e-01 9.3999e-03 weaklyHypometh 1.0000e+00 7.2307e-01 insignificant 6.1391e-01 5.1460e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0409811 1.4102e-01 insignificant 1.000000 insignificant 0.815789 0.908475 -0.091162 14 0.803078 0.896873 -0.0937950 9.9990e-01 1.1030e-07 weaklyHypometh 1.0000e+00 1.1030e-05 weaklyHypometh 9.9743e-01 5.2065e-04 weaklyHypometh 1.00000000 2.4793e-02 weaklyHypometh -0.0717475 4.6753e-02 weaklyHypometh 0.8821240 insignificant chr9 93763016 93764016 33673 ROR2 ENSG00000169071 0.820833 109 5 0.495917 70 4 0.788889 25 3 0.675926 74 3 0.739962 80 6 0.651190 53 3 0.646769 37 5 0.826531 58 5 0.694224 46 5 0.642593 38 4 0.65287 95 6 0.626263 40 3 0.8233333 75 5 0.9145833 68 5 0.836616 57 5 0.900000 10 0 0.699097 86 3 0.603363 115 5 0.892593 26 3 0.779365 44 2 0.558333 17 1 0.500000 4 0 0.77315 122 6 0.817460 43 3 0.851608 61 3 0.940171 45 3 0.761905 25 3 0.666667 14 0 0.693860 86 5 0.775000 45 3 0.6750627 69 4 0.78717 42 3 0.664815 68 6 0.600000 62 6 0.6544118 93 3 0.666667 13 1 0.807456 44 2 0.691176 55 3 0.698428 82 6 0.788872 105 6 0.773039 97 6 0.717726 85 5 0.811806 83 6 0.712500 0.563915 0.762963 0.712963 0.814646 0.683333 0.633995 0.801587 0.628968 0.580247 0.698652 0.528620 0.8462963 0.898611 0.798485 0.944444 0.727199 0.718958 0.851852 0.771693 0.687617 0.582533 0.707910 0.833333 0.805068 0.871795 0.851852 0.555556 0.757700 0.768519 0.6166667 0.814150 0.665432 0.622222 0.6339869 0.556049 0.7815789 0.7320261 0.714317 0.759561 0.779412 0.717577 0.792593 0 0.729685 0.760908 -0.0248512 4 0.679623 0.75446 -0.0748325 9.4842e-01 0.2775669 lowCoverage 1.0000000 1.00000 lowCoverage 0.99636697 0.48796900 lowCoverage 1.00000 1.00000 lowCoverage 0.0021801 0.9605612 lowCoverage 1 lowCoverage 0.730449 0.743284 0.0311291 3 0.724529 0.632102 0.0924269 6.0429e-03 4.9109e-01 lowCoverage 8.5112e-02 1.0000e+00 lowCoverage 3.2670e-01 7.1144e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0547914 1.7096e-01 lowCoverage 1.0000e+00 lowCoverage 0.730705 0.763274 -0.0268021 6 0.735880 0.767119 -0.0312391 9.2591e-01 2.7776e-01 insignificant 1.0000e+00 1.00000000 insignificant 8.3761e-01 0.66263285 insignificant 1.0000e+00 1.000000 insignificant -0.0224284 5.1014e-01 lowCoverage 1.000000 lowCoverage 0.760984 0.743284 0.05436996 3 0.755570 0.632102 0.123468 5.3512e-02 8.9573e-01 lowCoverage 5.9458e-01 1.0000e+00 lowCoverage 3.1642e-01 9.7256e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0526112 2.6239e-01 lowCoverage 1.0000e+00 lowCoverage 0.761566 0.763274 -0.0131507 4 0.757426 0.767119 -0.0096929 7.7456e-01 4.1834e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 5.4330e-01 8.8469e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage -0.0246085 5.6121e-01 lowCoverage 1.000000 lowCoverage 0.746224 0.763274 -0.067346 3 0.676136 0.767119 -0.0909830 9.4316e-01 1.6095e-02 lowCoverage 1.0000e+00 2.3326e-01 lowCoverage 8.8321e-01 1.9772e-01 lowCoverage 1.00000000 1.0000e+00 lowCoverage -0.0772198 5.8024e-02 lowCoverage 1.0000000 lowCoverage chr9 95269616 95270616 33706 FAM120AOS ENSG00000188938 0.722793 212 7 0.561845 181 7 0.603420 168 7 0.760224 175 7 0.587264 98 7 0.633264 196 7 0.606156 125 7 0.614718 135 7 0.458730 64 7 0.733333 46 5 0.65837 187 7 0.678571 34 4 0.7374050 96 7 0.6722022 100 7 0.734127 88 5 0.595238 50 6 0.666667 3 0 0.596020 136 7 0.690284 168 7 0.677868 138 7 0.628571 32 5 1.000000 2 0 0.66478 116 5 0.636338 57 7 0.794444 29 4 0.697893 159 7 0.536364 71 7 0.625000 44 5 0.631941 242 7 0.738501 138 7 0.6822980 175 7 0.65483 169 7 0.594678 157 7 0.635224 107 6 0.4810065 140 7 0.625000 8 0 0.522379 126 7 0.590251 166 7 0.656012 195 7 0.704457 162 7 0.651735 193 7 0.713274 200 7 0.746223 159 7 0.721063 0.562877 0.648577 0.728307 0.608024 0.643479 0.572601 0.602676 0.469231 0.694017 0.653176 0.730020 0.6783418 0.656752 0.821290 0.695027 0.661392 0.524646 0.664082 0.686879 0.678322 0.764053 0.666062 0.600483 0.777849 0.652614 0.524878 0.588287 0.632775 0.701490 0.6871326 0.633488 0.610431 0.623059 0.4424110 0.621087 0.5551235 0.5688062 0.653079 0.709994 0.685006 0.707646 0.719878 4 0.654167 0.658023 -0.0013748 7 0.655374 0.66801 -0.0126401 6.7301e-01 0.2710123 insignificant 1.0000000 1.00000 insignificant 0.74583584 0.20634000 insignificant 1.00000 1.00000 insignificant -0.0414893 0.2837425 insignificant 1 insignificant 0.654167 0.562500 0.0907465 7 0.655374 0.563939 0.0914349 2.5908e-04 9.9996e-01 weaklyHypermeth 4.6264e-03 1.0000e+00 weaklyHypermeth 7.6136e-04 9.9345e-01 weaklyHypermeth 2.1274e-02 1.0000e+00 weaklyHypermeth 0.0746682 3.0955e-02 weaklyHypermeth 6.3174e-01 insignificant 0.654167 0.690869 -0.0405866 7 0.655374 0.691756 -0.0363816 9.8476e-01 1.4569e-01 insignificant 1.0000e+00 1.00000000 insignificant 9.6430e-01 0.18736787 insignificant 1.0000e+00 1.000000 insignificant -0.0449154 9.0297e-02 insignificant 1.000000 insignificant 0.658023 0.562500 0.09334174 7 0.668015 0.563939 0.104075 6.2247e-05 9.9997e-01 weaklyHypermeth 1.5562e-03 1.0000e+00 weaklyHypermeth 4.2181e-04 9.9995e-01 weaklyHypermeth 1.4663e-02 1.0000e+00 weaklyHypermeth 0.1161575 1.3362e-02 weaklyHypermeth 3.3435e-01 insignificant 0.658023 0.690869 -0.0401647 7 0.668015 0.691756 -0.0237415 8.2222e-01 1.0257e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.3223e-01 2.2499e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0034261 9.2956e-01 insignificant 1.000000 insignificant 0.562500 0.690869 -0.129444 7 0.563939 0.691756 -0.1278166 9.9999e-01 8.4191e-06 weaklyHypometh 1.0000e+00 3.8269e-04 weaklyHypometh 9.9999e-01 5.6207e-05 weaklyHypometh 1.00000000 5.1563e-03 weaklyHypometh -0.1195836 3.8252e-03 weaklyHypometh 0.1456013 insignificant chr9 95270016 95271016 33707 FAM120AOS ENSG00000188938 0.722793 212 7 0.561845 181 7 0.603420 168 7 0.760224 175 7 0.587264 98 7 0.633264 196 7 0.606156 125 7 0.614718 135 7 0.458730 64 7 0.733333 46 5 0.65837 187 7 0.678571 34 4 0.7374050 96 7 0.6722022 100 7 0.734127 88 5 0.595238 50 6 0.666667 3 0 0.596020 136 7 0.690284 168 7 0.677868 138 7 0.628571 32 5 1.000000 2 0 0.66478 116 5 0.636338 57 7 0.794444 29 4 0.697893 159 7 0.536364 71 7 0.625000 44 5 0.631941 242 7 0.738501 138 7 0.6822980 175 7 0.65483 169 7 0.594678 157 7 0.635224 107 6 0.4810065 140 7 0.625000 8 0 0.522379 126 7 0.590251 166 7 0.656012 195 7 0.704457 162 7 0.651735 193 7 0.713274 200 7 0.746223 159 7 0.721063 0.562877 0.648577 0.728307 0.608024 0.643479 0.572601 0.602676 0.469231 0.694017 0.653176 0.730020 0.6783418 0.656752 0.821290 0.695027 0.661392 0.524646 0.664082 0.686879 0.678322 0.764053 0.666062 0.600483 0.777849 0.652614 0.524878 0.588287 0.632775 0.701490 0.6871326 0.633488 0.610431 0.623059 0.4424110 0.621087 0.5551235 0.5688062 0.653079 0.709994 0.685006 0.707646 0.719878 4 0.654167 0.658023 -0.0013748 7 0.655374 0.66801 -0.0126401 6.7301e-01 0.2710123 insignificant 1.0000000 1.00000 insignificant 0.74583584 0.20634000 insignificant 1.00000 1.00000 insignificant -0.0414893 0.2837425 insignificant 1 insignificant 0.654167 0.562500 0.0907465 7 0.655374 0.563939 0.0914349 2.5908e-04 9.9996e-01 weaklyHypermeth 4.6264e-03 1.0000e+00 weaklyHypermeth 7.6136e-04 9.9345e-01 weaklyHypermeth 2.1274e-02 1.0000e+00 weaklyHypermeth 0.0746682 3.0955e-02 weaklyHypermeth 6.3174e-01 insignificant 0.654167 0.690869 -0.0405866 7 0.655374 0.691756 -0.0363816 9.8476e-01 1.4569e-01 insignificant 1.0000e+00 1.00000000 insignificant 9.6430e-01 0.18736787 insignificant 1.0000e+00 1.000000 insignificant -0.0449154 9.0297e-02 insignificant 1.000000 insignificant 0.658023 0.562500 0.09334174 7 0.668015 0.563939 0.104075 6.2247e-05 9.9997e-01 weaklyHypermeth 1.5562e-03 1.0000e+00 weaklyHypermeth 4.2181e-04 9.9995e-01 weaklyHypermeth 1.4663e-02 1.0000e+00 weaklyHypermeth 0.1161575 1.3362e-02 weaklyHypermeth 3.3435e-01 insignificant 0.658023 0.690869 -0.0401647 7 0.668015 0.691756 -0.0237415 8.2222e-01 1.0257e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.3223e-01 2.2499e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0034261 9.2956e-01 insignificant 1.000000 insignificant 0.562500 0.690869 -0.129444 7 0.563939 0.691756 -0.1278166 9.9999e-01 8.4191e-06 weaklyHypometh 1.0000e+00 3.8269e-04 weaklyHypometh 9.9999e-01 5.6207e-05 weaklyHypometh 1.00000000 5.1563e-03 weaklyHypometh -0.1195836 3.8252e-03 weaklyHypometh 0.1456013 insignificant chr9 95401316 95402316 33714 PHF2 ENSG00000197724 0.817770 523 9 0.712663 301 9 0.714935 97 9 0.677576 469 9 0.609580 85 9 0.741240 404 9 0.724478 171 8 0.774857 141 8 0.630260 63 5 0.739418 26 1 0.79362 340 9 0.935185 25 1 0.8877218 65 5 0.7434028 50 6 0.935417 57 4 1.000000 21 1 NA 0 0 0.784019 776 8 0.872458 301 8 0.753677 304 9 0.837654 103 8 0.703704 25 3 0.73368 179 9 0.726094 51 5 0.698722 218 9 0.662784 353 9 0.768607 69 9 0.925071 72 5 0.746628 299 8 0.745155 433 9 0.8553444 564 9 0.77660 362 9 0.920656 220 8 0.832729 231 9 0.8990746 420 5 1.000000 18 1 0.797030 268 9 0.786186 450 9 0.811803 492 9 0.865598 454 9 0.669283 532 9 0.782454 259 5 0.702107 490 9 0.813036 0.796982 0.737974 0.766485 0.476697 0.744388 0.825235 0.837994 0.657940 0.720288 0.783951 0.926471 0.9066274 0.770251 0.880847 0.967974 NA 0.821684 0.853463 0.751790 0.818853 0.611204 0.738949 0.843812 0.668232 0.654241 0.795665 0.906809 0.729692 0.796295 0.8631355 0.783015 0.925451 0.768559 0.8126080 0.991268 0.8689531 0.7675236 0.831417 0.838957 0.637079 0.759864 0.615619 1 0.802466 0.783358 0.0123575 9 0.750260 0.78307 -0.0328119 8.0953e-01 0.9921628 insignificant 1.0000000 1.00000 insignificant 0.40199695 0.98296463 insignificant 1.00000 1.00000 insignificant 0.0164853 0.6130845 insignificant 1 insignificant 0.803563 0.836963 -0.0468982 9 0.800313 0.786015 0.0142973 5.1461e-01 6.8833e-11 weaklyHypometh 1.0000e+00 1.7208e-08 weaklyHypometh 9.8271e-01 4.9019e-06 weaklyHypometh 1.0000e+00 2.4510e-03 weaklyHypometh -0.0911242 5.0649e-02 insignificant 8.8857e-01 insignificant 0.802372 0.758419 0.0409827 9 0.700313 0.753254 -0.0529411 1.1829e-01 3.4326e-01 insignificant 1.0000e+00 1.00000000 insignificant 1.1898e-01 0.79728951 insignificant 1.0000e+00 1.000000 insignificant 0.0152394 7.3315e-01 insignificant 1.000000 insignificant 0.783327 0.837484 -0.06269134 9 0.766319 0.873350 -0.107032 7.1281e-01 1.4359e-10 weaklyHypometh 1.0000e+00 4.7863e-08 weaklyHypometh 9.8836e-01 1.4726e-06 weaklyHypometh 1.0000e+00 7.3631e-04 weaklyHypometh -0.1076094 2.4160e-02 weaklyHypometh 5.1405e-01 insignificant 0.783119 0.758419 0.0297432 9 0.739687 0.753254 -0.0135669 1.8348e-01 5.3435e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.1084e-01 6.7867e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0012459 9.7706e-01 insignificant 1.000000 insignificant 0.837484 0.758543 0.101696 9 0.873350 0.762874 0.1104758 2.3449e-08 9.9805e-01 weaklyHypermeth 7.8164e-06 1.0000e+00 weaklyHypermeth 3.6727e-07 1.0000e+00 weaklyHypermeth 0.00018363 1.0000e+00 weaklyHypermeth 0.1063636 5.9767e-02 insignificant 1.0000000 insignificant chr9 96449116 96450116 33736 FBP1 ENSG00000165140 0.968282 115 5 0.809524 39 5 0.980000 28 4 0.943794 125 5 0.960000 23 1 0.921342 205 5 0.729131 80 5 0.833333 28 1 0.691952 50 4 0.833333 44 4 0.97947 92 5 1.000000 11 0 0.8266667 22 3 0.8200000 22 4 0.750000 47 4 0.925000 33 4 NA 0 0 0.634921 27 1 1.000000 8 0 0.968485 67 5 0.800000 7 0 0.783333 13 0 0.86000 23 2 1.000000 11 0 0.845051 44 4 0.905051 60 5 0.833333 18 0 0.500000 4 0 1.000000 13 1 0.963492 47 5 0.9361111 67 5 0.94093 133 5 0.838095 29 4 0.840000 64 5 0.5142857 23 1 NA 0 0 0.669444 47 4 0.899767 52 4 0.781341 122 5 0.756856 149 5 0.946559 223 5 1.000000 16 0 0.911507 167 5 0.967188 0.970443 0.996552 0.942633 0.993103 0.921914 0.897868 0.807471 0.866637 0.965517 0.971506 0.993210 0.9068966 0.900000 0.941486 0.922414 NA 0.923372 1.000000 0.983072 0.977128 0.706897 0.855172 1.000000 0.824382 0.886451 1.000000 0.599211 1.000000 0.974548 0.9482759 0.942207 0.947455 0.834483 0.5714286 NA 0.8551724 0.9268748 0.920515 0.909918 0.955961 0.997678 0.908334 0 0.923801 0.913636 0.0088798 5 0.774954 0.76252 0.0124329 2.7930e-01 0.7650470 insignificant 1.0000000 1.00000 insignificant 0.56056964 0.14023664 insignificant 1.00000 1.00000 insignificant 0.0084393 0.8594332 lowCoverage 1 lowCoverage 0.923801 0.823256 0.1052858 4 0.774954 0.678732 0.0962220 2.3761e-03 9.9994e-01 lowCoverage 3.6001e-02 1.0000e+00 lowCoverage 2.2479e-02 9.9635e-01 lowCoverage 3.8100e-01 1.0000e+00 lowCoverage 0.1200624 1.7081e-01 lowCoverage 1.0000e+00 lowCoverage 0.923801 0.927622 -0.0006589 5 0.774954 0.775793 -0.0008390 6.9792e-01 8.3677e-01 insignificant 1.0000e+00 1.00000000 insignificant 3.3314e-01 0.93283551 insignificant 1.0000e+00 1.000000 insignificant -0.0068718 9.0231e-01 lowCoverage 1.000000 lowCoverage 0.913636 0.823256 0.08609627 4 0.762521 0.678732 0.083789 1.0241e-02 9.6941e-01 lowCoverage 1.3886e-01 1.0000e+00 lowCoverage 1.8256e-02 9.7942e-01 lowCoverage 3.2029e-01 1.0000e+00 lowCoverage 0.1116231 2.1300e-01 lowCoverage 1.0000e+00 lowCoverage 0.913636 0.927622 -0.0131553 5 0.762521 0.775793 -0.0132719 8.6065e-01 6.6829e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.3247e-01 9.6742e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0153110 8.0856e-01 lowCoverage 1.000000 lowCoverage 0.823256 0.927622 -0.102243 4 0.678732 0.775793 -0.0970610 9.9555e-01 1.3472e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.8979e-01 1.9892e-01 lowCoverage 1.00000000 1.0000e+00 lowCoverage -0.1269342 1.7984e-01 lowCoverage 1.0000000 lowCoverage chr9 96594616 96595616 33743 MIR24-1 ENSG00000148120 0.800920 92 5 0.745861 107 5 0.904751 105 5 0.833333 30 2 0.926580 73 5 0.884443 135 5 0.909004 130 5 0.851251 71 5 0.903743 99 5 0.925735 95 5 0.91065 165 5 0.709524 42 5 0.8786518 113 5 NA 0 0 0.925294 113 5 0.931724 96 5 0.888571 69 5 0.832234 34 2 0.937143 50 5 0.884354 111 5 0.933333 29 3 0.692308 26 2 0.89170 95 5 0.971429 47 5 0.877778 25 2 0.769412 110 5 0.900000 60 5 0.917647 46 5 0.841605 62 3 0.934243 84 5 0.9123737 113 5 0.87899 148 5 0.818450 107 5 0.901754 119 5 0.5333333 30 2 0.225000 19 2 0.892647 50 5 0.290812 114 5 0.917742 98 5 0.932832 108 5 0.826096 44 2 0.900645 73 4 0.942857 49 2 0.720179 0.648004 0.810252 0.823744 0.900476 0.777032 0.829037 0.709655 0.794118 0.810478 0.789993 0.610714 0.7452211 NA 0.819559 0.862241 0.836429 0.724542 0.877143 0.707483 0.816667 0.676360 0.723913 0.921429 0.691667 0.703382 0.742857 0.773529 0.697023 0.828784 0.8357323 0.764411 0.664199 0.813158 0.5441047 0.400000 0.7360294 0.4262745 0.814113 0.821867 0.704057 0.750968 0.842857 2 0.842197 0.830769 0.0055160 5 0.881390 0.88027 0.0011237 6.6591e-01 0.6829771 insignificant 1.0000000 1.00000 insignificant 0.87421269 0.05805509 insignificant 1.00000 1.00000 insignificant -0.0039050 0.8851809 lowCoverage 1 lowCoverage 0.842197 0.653759 0.1852166 5 0.881390 0.674424 0.2069668 1.8128e-06 1.0000e+00 weaklyHypermeth 5.4934e-05 1.0000e+00 weaklyHypermeth 3.9449e-03 9.9960e-01 weaklyHypermeth 8.1002e-02 1.0000e+00 weaklyHypermeth 0.2624969 8.8788e-02 lowCoverage 1.0000e+00 lowCoverage 0.842197 0.838710 -0.0214793 5 0.881390 0.912394 -0.0310041 9.8142e-01 5.0466e-02 insignificant 1.0000e+00 1.00000000 insignificant 9.8008e-01 0.01829883 weaklyHypometh 1.0000e+00 0.914942 insignificant -0.0312048 2.5177e-01 lowCoverage 1.000000 lowCoverage 0.830769 0.653759 0.17649089 5 0.880267 0.674424 0.205843 1.3544e-04 1.0000e+00 weaklyHypermeth 2.7089e-03 1.0000e+00 weaklyHypermeth 4.2524e-04 1.0000e+00 weaklyHypermeth 1.4663e-02 1.0000e+00 weaklyHypermeth 0.2664019 8.5526e-02 lowCoverage 1.0000e+00 lowCoverage 0.830769 0.838710 -0.0299849 5 0.880267 0.912394 -0.0321278 9.8148e-01 8.2992e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6440e-01 2.1444e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0272998 3.8760e-01 lowCoverage 1.000000 lowCoverage 0.653759 0.838710 -0.189799 5 0.674424 0.912394 -0.2379709 9.9988e-01 3.7121e-03 weaklyHypometh 1.0000e+00 6.8743e-02 weaklyHypometh 1.0000e+00 7.8923e-04 weaklyHypometh 1.00000000 3.4314e-02 weaklyHypometh -0.2937017 6.4638e-02 lowCoverage 1.0000000 lowCoverage chr9 96620016 96621016 33745 MIR24-1 ENSG00000148120 0.817292 277 8 0.736214 143 8 0.751296 95 8 0.863335 200 8 0.758036 57 4 0.740979 272 8 0.737288 78 6 0.757029 99 8 0.694966 79 8 0.733770 105 8 0.82571 241 8 0.630579 57 4 0.8431450 121 8 0.6000000 22 1 0.714651 96 8 0.484821 54 4 0.770739 49 4 0.800881 202 8 0.820283 123 8 0.775834 187 8 0.897107 50 3 0.880952 64 7 0.66111 104 4 0.641827 65 7 0.795246 51 5 0.733028 187 8 0.821432 74 7 0.566667 27 2 0.717741 132 8 0.682525 233 8 0.7180911 164 8 0.77096 301 8 0.670779 113 8 0.620865 132 8 0.6502497 167 8 0.785256 64 4 0.577983 97 8 0.720757 191 8 0.833533 222 8 0.860904 237 8 0.813179 216 8 0.764860 188 8 0.814660 206 8 0.835913 0.782856 0.799629 0.875453 0.809951 0.763902 0.789607 0.815246 0.754523 0.777455 0.871197 0.716123 0.8553699 0.745000 0.785404 0.666300 0.741045 0.789250 0.842943 0.820068 0.903574 0.920364 0.738492 0.702264 0.863562 0.816765 0.837609 0.669516 0.757581 0.762935 0.7812081 0.811602 0.674403 0.656322 0.7231180 0.813281 0.5620747 0.7861707 0.851859 0.873391 0.847485 0.808165 0.859088 3 0.797810 0.777548 0.0235844 8 0.762037 0.75101 0.0110224 6.8088e-02 0.9250298 insignificant 1.0000000 1.00000 insignificant 0.69656079 0.71367440 insignificant 1.00000 1.00000 insignificant 0.0022845 0.9479702 insignificant 1 insignificant 0.797810 0.701571 0.0940461 8 0.762037 0.674291 0.0877455 2.9255e-05 9.9992e-01 weaklyHypermeth 6.6489e-04 1.0000e+00 weaklyHypermeth 3.6436e-03 9.9994e-01 weaklyHypermeth 7.9209e-02 1.0000e+00 weaklyHypermeth 0.0718606 7.4884e-02 insignificant 1.0000e+00 insignificant 0.798039 0.829747 -0.0405355 8 0.776967 0.819291 -0.0423239 9.9356e-01 7.2429e-02 insignificant 1.0000e+00 1.00000000 insignificant 9.9557e-01 0.11177834 insignificant 1.0000e+00 1.000000 insignificant -0.0745849 8.9792e-03 weaklyHypometh 0.581578 insignificant 0.777548 0.701571 0.07419957 8 0.751014 0.674291 0.076723 1.4535e-02 9.9479e-01 weaklyHypermeth 1.9125e-01 1.0000e+00 insignificant 4.8544e-02 9.9544e-01 weaklyHypermeth 7.1388e-01 1.0000e+00 insignificant 0.0695761 1.1546e-01 insignificant 1.0000e+00 insignificant 0.777855 0.829747 -0.0625314 8 0.740978 0.819291 -0.0783130 9.9982e-01 4.1933e-03 weaklyHypometh 1.0000e+00 4.6592e-01 insignificant 9.9213e-01 7.3998e-02 insignificant 1.0000e+00 1.00000000 insignificant -0.0768694 3.1250e-02 weaklyHypometh 1.000000 insignificant 0.701987 0.829747 -0.137630 8 0.677150 0.819291 -0.1421406 1.0000e+00 2.4750e-06 weaklyHypometh 1.0000e+00 1.3512e-04 weaklyHypometh 1.0000e+00 8.8128e-06 weaklyHypometh 1.00000000 1.7882e-03 weaklyHypometh -0.1464455 3.0582e-03 weaklyHypometh 0.1390074 insignificant chr9 96649716 96650716 33746 MIR24-1 ENSG00000148120 0.756430 350 4 0.675443 228 4 0.724866 144 4 0.798870 319 4 0.781682 79 4 0.679463 474 4 0.720607 198 4 0.665879 105 4 0.806812 74 4 0.724167 40 2 0.53873 319 4 0.738636 52 2 0.7276786 74 4 0.6475414 67 4 0.670387 71 4 0.803571 50 2 0.780329 1906 6 0.779481 147 4 0.861438 122 4 0.823214 308 4 0.696114 44 2 1.000000 6 0 0.64670 139 7 0.774307 85 2 0.882692 44 4 0.825352 218 4 0.630303 111 2 0.779167 38 2 0.817711 149 4 0.750310 161 4 0.8663111 264 4 0.68539 314 4 0.749801 158 4 0.747500 124 4 0.7064469 160 4 0.883333 14 0 0.656708 126 4 0.661395 244 4 0.650373 437 5 0.804724 260 8 0.815628 695 4 0.696409 198 8 0.746847 188 4 0.883883 0.861679 0.897878 0.927963 0.923662 0.922180 0.942884 0.836916 0.907488 0.921466 0.904911 0.891956 0.8681127 0.899815 0.916106 0.768138 0.948264 0.860708 0.893372 0.918474 0.835414 0.942302 0.899553 0.925417 0.909031 0.899163 0.880533 0.876091 0.924860 0.921758 0.9328400 0.914495 0.920037 0.819895 0.9247454 0.860384 0.9005353 0.9102834 0.903985 0.924007 0.942482 0.874911 0.906364 2 0.905988 0.895105 0.0135992 4 0.742108 0.69711 0.0450009 2.8587e-04 0.0143459 lowCoverage 0.1429360 1.00000 lowCoverage 0.31652304 0.11171083 lowCoverage 1.00000 1.00000 lowCoverage -0.0442681 0.2256558 lowCoverage 1 lowCoverage 0.905988 0.887409 0.0223965 4 0.742108 0.655643 0.0864652 6.1389e-03 7.9706e-01 lowCoverage 8.5262e-02 1.0000e+00 lowCoverage 5.8645e-01 8.5556e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0010641 9.7834e-01 lowCoverage 1.0000e+00 lowCoverage 0.905988 0.888639 0.0018343 8 0.742108 0.744595 -0.0024869 1.2366e-01 2.8564e-02 inconclusive 1.0000e+00 1.00000000 insignificant 6.6471e-01 0.09372333 insignificant 1.0000e+00 1.000000 insignificant -0.0075349 8.3924e-01 lowCoverage 1.000000 lowCoverage 0.895105 0.887409 0.01106296 4 0.697107 0.655643 0.041464 2.4973e-01 8.3850e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 4.0039e-01 8.4824e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0453322 3.4311e-01 lowCoverage 1.0000e+00 lowCoverage 0.895105 0.888639 -0.0171916 4 0.697107 0.744595 -0.0474878 9.5736e-01 1.6584e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.8973e-01 5.1259e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 0.0367332 4.2284e-01 lowCoverage 1.000000 lowCoverage 0.887409 0.888639 -0.029141 4 0.655643 0.744595 -0.0889521 9.7518e-01 9.5117e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.2395e-01 4.4462e-01 lowCoverage 1.00000000 1.0000e+00 lowCoverage -0.0085990 8.5701e-01 lowCoverage 1.0000000 lowCoverage chr9 96892116 96893116 33775 MIR24-1 ENSG00000207617 0.776241 371 9 0.846387 535 10 0.738792 495 13 0.902584 238 12 0.900611 616 12 0.829914 335 12 0.760157 253 9 0.867214 387 13 0.826022 369 13 0.896147 362 12 0.91310 801 13 0.828517 305 9 0.7909081 431 13 0.7538462 62 5 0.858149 325 13 0.908264 263 9 0.889911 315 9 0.696520 266 12 0.849371 576 13 0.803614 335 13 0.888296 326 12 0.688814 120 10 0.84634 276 12 0.657110 138 10 0.770611 68 4 0.888958 484 13 0.703342 209 12 0.812408 126 9 0.820633 418 13 0.892647 528 13 0.7508581 704 13 0.83237 386 12 0.417167 436 13 0.366951 511 13 0.6782132 562 10 0.094248 118 7 0.452247 276 13 0.125236 636 13 0.801017 276 9 0.747256 393 10 0.792575 188 10 0.745833 297 9 0.621200 321 12 0.908694 0.879235 0.844583 0.904617 0.938425 0.875805 0.881712 0.911178 0.847954 0.906882 0.928359 0.885211 0.8880213 0.896596 0.890852 0.890168 0.866993 0.777764 0.902869 0.855889 0.898020 0.663012 0.878407 0.780585 0.762264 0.901471 0.792405 0.876089 0.827771 0.907413 0.8074515 0.902400 0.408864 0.292452 0.7377317 0.073929 0.5634138 0.1219428 0.761774 0.739109 0.777688 0.767205 0.639377 7 0.878665 0.847211 0.0171994 13 0.815001 0.78833 0.0266746 3.9867e-02 0.9323069 weaklyHypermeth 1.0000000 1.00000 insignificant 0.05249055 0.95893852 insignificant 1.00000 1.00000 insignificant 0.0357816 0.2084733 insignificant 1 insignificant 0.878665 0.415124 0.4419704 13 0.815001 0.350109 0.4648922 4.0207e-62 1.0000e+00 hypermethylated 4.0207e-59 1.0000e+00 hypermethylated 6.6605e-24 1.0000e+00 hypermethylated 6.6605e-21 1.0000e+00 hypermethylated 0.4761366 2.8186e-03 weaklyHypermeth 1.1274e-01 insignificant 0.878863 0.741695 0.1366906 10 0.839232 0.727930 0.1113019 1.6505e-22 1.0000e+00 weaklyHypermeth 8.2525e-20 1.00000000 weaklyHypermeth 3.9833e-11 0.99980408 weaklyHypermeth 1.9916e-08 1.000000 weaklyHypermeth 0.0902377 4.4726e-02 weaklyHypermeth 1.000000 insignificant 0.847211 0.415124 0.45932117 13 0.788326 0.350109 0.438218 2.4544e-40 1.0000e+00 hypermethylated 1.2272e-37 1.0000e+00 hypermethylated 1.3577e-16 1.0000e+00 hypermethylated 1.3577e-13 1.0000e+00 hypermethylated 0.4403550 3.5244e-03 weaklyHypermeth 1.2691e-01 insignificant 0.847843 0.741695 0.1138030 10 0.829736 0.727930 0.1018062 4.7723e-09 1.0000e+00 weaklyHypermeth 1.5908e-06 1.0000e+00 weaklyHypermeth 1.2702e-04 9.9954e-01 weaklyHypermeth 3.1754e-02 1.00000000 weaklyHypermeth 0.0544561 2.0673e-01 insignificant 1.000000 insignificant 0.415451 0.741695 -0.322010 10 0.377040 0.727930 -0.3508897 1.0000e+00 8.3425e-15 hypomethylated 1.0000e+00 2.6295e-12 hypomethylated 1.0000e+00 6.6221e-11 hypomethylated 1.00000000 6.6221e-08 hypomethylated -0.3858989 6.0315e-03 weaklyHypometh 0.2079822 insignificant chr9 96901316 96902316 33776 MIR24-1 ENSG00000207617 0.941947 156 6 0.960317 55 5 0.837963 39 4 0.934452 138 6 0.934524 19 1 0.886866 171 6 0.822727 40 6 0.918555 63 5 0.809524 31 4 0.947222 45 5 0.69296 150 6 0.870000 23 3 0.9472222 69 6 0.8750000 13 0 0.919048 43 5 1.000000 6 0 1.000000 1 0 0.930442 171 6 0.913208 91 6 0.945320 142 6 0.788400 44 4 0.953598 66 4 0.97222 42 5 0.940476 45 3 0.951515 44 4 0.961224 89 5 0.857143 46 5 0.666667 13 0 0.876323 84 6 0.946469 107 5 0.9605664 113 6 0.89692 166 6 0.821429 46 2 0.817361 79 6 1.0000000 86 2 0.904762 26 3 0.929293 27 1 0.708431 106 6 0.957081 66 6 0.892517 183 6 0.908832 131 6 0.836735 83 4 0.994048 138 5 0.943355 0.897119 0.815844 0.934933 0.916667 0.928790 0.759764 0.895019 0.876543 0.970679 0.858996 0.861412 0.9654321 0.849818 0.833333 0.987990 NA 0.938757 0.926557 0.944708 0.932888 0.936237 0.969136 0.972222 0.929293 0.923810 1.000000 0.629630 0.881908 0.915537 0.9405471 0.875444 0.995370 0.950772 0.9576742 0.913757 0.9589997 0.8998236 0.931145 0.949912 0.865563 0.977072 0.995370 0 0.913311 0.917346 -0.0074657 5 0.897639 0.88859 0.0090450 5.7795e-01 0.3171069 insignificant 1.0000000 1.00000 insignificant 0.77984137 0.27957304 insignificant 1.00000 1.00000 insignificant 0.0067380 0.8292159 lowCoverage 1 lowCoverage 0.913311 0.905405 0.0077849 6 0.897639 0.813977 0.0836619 6.2278e-03 3.1395e-01 weaklyHypermeth 8.5312e-02 1.0000e+00 weaklyHypermeth 2.3866e-01 1.4177e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0408188 3.9512e-01 lowCoverage 1.0000e+00 lowCoverage 0.913311 0.941764 -0.0297185 6 0.897639 0.913231 -0.0155915 9.7451e-01 2.2116e-01 insignificant 1.0000e+00 1.00000000 insignificant 8.9905e-01 0.31055187 insignificant 1.0000e+00 1.000000 insignificant -0.0134777 6.8119e-01 lowCoverage 1.000000 lowCoverage 0.917346 0.905405 0.00646534 5 0.888594 0.813977 0.074617 1.3288e-03 8.6739e-02 weaklyHypermeth 2.1783e-02 1.0000e+00 weaklyHypermeth 1.7550e-01 2.3442e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0340808 5.0787e-01 lowCoverage 1.0000e+00 lowCoverage 0.917346 0.941764 -0.0229896 5 0.888594 0.913231 -0.0246365 8.7854e-01 3.6788e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.5940e-01 5.9802e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0202157 6.0235e-01 lowCoverage 1.000000 lowCoverage 0.905405 0.941764 -0.035317 6 0.813977 0.913231 -0.0992534 8.4062e-01 3.5222e-02 weaklyHypometh 1.0000e+00 4.5742e-01 insignificant 7.9133e-01 4.0779e-01 insignificant 1.00000000 1.0000e+00 insignificant -0.0542965 3.0695e-01 lowCoverage 1.0000000 lowCoverage chr9 97235416 97236416 33786 ENSG00000219258 0.674655 166 8 0.635218 110 8 0.763396 52 6 0.811938 156 6 0.736607 54 8 0.686959 238 8 0.808036 32 2 0.637346 109 6 0.771970 43 2 0.755556 24 2 0.80683 193 8 0.520000 32 2 0.8163781 80 6 0.7328042 53 6 0.806902 75 8 0.916667 9 0 0.916667 8 0 0.855934 148 8 0.790538 104 6 0.685447 151 8 0.812500 27 2 0.830000 39 4 0.56618 58 6 0.877778 38 5 0.842965 58 6 0.842152 161 7 0.639286 59 5 0.714286 17 2 0.859091 92 6 0.829847 152 8 0.8546429 129 8 0.84045 260 9 0.691411 89 8 0.845398 65 6 0.7416667 116 6 0.916667 8 0 0.715745 67 6 0.699748 147 8 0.738120 110 6 0.820770 105 6 0.834259 135 6 0.733929 51 6 0.880412 134 6 0.754827 0.678911 0.721861 0.770545 0.847264 0.829779 0.857396 0.736924 0.742102 0.845999 0.837368 0.698936 0.8188035 0.769250 0.836654 0.837134 0.910337 0.829822 0.857639 0.830404 0.921986 0.880319 0.880899 0.863830 0.882777 0.889395 0.577406 0.725486 0.815474 0.833927 0.8865762 0.841213 0.736262 0.788792 0.6691489 0.840426 0.7689239 0.7336555 0.728083 0.832478 0.890514 0.827698 0.889438 2 0.775177 0.826606 -0.0512537 6 0.735042 0.75779 -0.0227516 9.4026e-01 0.0014484 weaklyHypometh 1.0000000 0.28969 insignificant 0.96574109 0.02441821 weaklyHypometh 1.00000 1.00000 insignificant -0.0359388 0.3259231 insignificant 1 insignificant 0.775532 0.733740 0.0440257 6 0.742639 0.734773 0.0078667 5.8654e-03 6.9084e-01 weaklyHypermeth 8.3792e-02 1.0000e+00 weaklyHypermeth 1.7000e-01 5.7905e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0119468 7.8900e-01 insignificant 1.0000e+00 insignificant 0.775177 0.805607 -0.0303222 6 0.735042 0.807414 -0.0723718 9.9122e-01 1.7144e-01 insignificant 1.0000e+00 1.00000000 insignificant 9.8491e-01 0.24464335 insignificant 1.0000e+00 1.000000 insignificant -0.0450056 2.3979e-01 insignificant 1.000000 insignificant 0.829493 0.733740 0.09686121 6 0.819771 0.734773 0.084998 2.2239e-04 9.9919e-01 weaklyHypermeth 3.9015e-03 1.0000e+00 weaklyHypermeth 3.9995e-02 9.9157e-01 weaklyHypermeth 6.3485e-01 1.0000e+00 insignificant 0.0239920 6.2015e-01 insignificant 1.0000e+00 insignificant 0.826606 0.805607 0.0147623 6 0.757794 0.807414 -0.0496202 3.8864e-01 4.4577e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.3602e-01 6.6774e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0090668 8.2579e-01 insignificant 1.000000 insignificant 0.733740 0.805243 -0.080496 6 0.734773 0.786015 -0.0512428 9.8646e-01 3.6275e-03 weaklyHypometh 1.0000e+00 6.8444e-02 weaklyHypometh 9.7951e-01 1.0797e-01 insignificant 1.00000000 1.0000e+00 insignificant -0.0330588 5.0051e-01 insignificant 1.0000000 insignificant chr9 97264216 97265216 33788 PTCH1 ENSG00000185920 0.125000 42 5 0.336478 202 7 0.417467 155 7 0.129630 16 1 0.243292 220 7 0.339286 55 2 0.294714 274 7 0.404827 185 7 0.306971 171 7 0.237755 165 6 0.23302 280 7 0.378720 265 6 0.1140730 249 6 0.1428571 15 1 0.040512 216 6 0.397728 139 6 0.171370 251 5 0.116667 21 1 0.441885 118 6 0.092857 62 6 0.169312 43 1 0.000000 16 0 0.20391 93 7 0.155967 88 7 0.111111 9 0 0.072506 339 7 0.039116 65 4 0.068027 42 5 0.180061 168 5 0.213762 328 7 0.1623761 353 7 0.49750 79 6 0.000000 261 7 0.025475 172 7 0.0000000 108 6 NA 0 0 0.043897 93 5 0.003663 225 7 0.292572 45 2 0.202381 71 6 0.222222 9 0 0.000000 7 0 0.156250 29 1 0.152344 0.242900 0.418188 0.163194 0.259139 0.394531 0.299034 0.334530 0.333315 0.265997 0.351375 0.384158 0.1459727 0.190689 0.040199 0.394602 0.252999 0.162500 0.574353 0.181771 0.240741 0.137768 0.349144 0.055258 0.125000 0.135587 0.068080 0.048363 0.197716 0.116634 0.1832862 0.653708 0.000000 0.014431 0.0000000 NA 0.0767549 0.0040064 0.325408 0.187500 0.270833 0.000000 0.203125 0 0.229281 0.159581 0.0886378 7 0.294085 0.19766 0.0964281 6.5798e-06 0.9999990 weaklyHypermeth 0.0065798 1.00000 weaklyHypermeth 0.00150432 0.99999943 weaklyHypermeth 0.75216 1.00000 insignificant 0.0921181 0.0583276 lowCoverage 1 lowCoverage 0.229281 0.013970 0.2271849 7 0.294085 0.011567 0.2825181 3.1792e-14 1.0000e+00 hypermethylated 1.7662e-12 1.0000e+00 hypermethylated 6.3542e-09 1.0000e+00 hypermethylated 1.0590e-06 1.0000e+00 hypermethylated 0.2336486 7.1235e-08 hypermethylated 2.3745e-05 hypermethylated 0.229281 0.167702 0.1403362 2 0.294085 0.169590 0.1244949 9.8649e-04 1.0350e-01 lowCoverage 7.5884e-02 1.00000000 lowCoverage 6.9285e-03 0.80680845 lowCoverage 5.5105e-01 1.000000 lowCoverage 0.0735705 2.3372e-01 lowCoverage 1.000000 lowCoverage 0.159581 0.013970 0.14580650 7 0.197657 0.011567 0.186090 1.9365e-06 1.0000e+00 weaklyHypermeth 6.2466e-05 1.0000e+00 weaklyHypermeth 8.0595e-04 1.0000e+00 weaklyHypermeth 2.4423e-02 1.0000e+00 weaklyHypermeth 0.1415305 2.6962e-03 lowCoverage 1.1234e-01 lowCoverage 0.159581 0.167702 0.0388627 2 0.197657 0.169590 0.0280668 2.4015e-01 1.5524e-03 lowCoverage 1.0000e+00 3.7322e-01 lowCoverage 3.9265e-01 5.2541e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage -0.0185475 7.6862e-01 lowCoverage 1.000000 lowCoverage 0.013970 0.167702 -0.151747 2 0.011567 0.169590 -0.1580232 9.9914e-01 3.1446e-05 lowCoverage 1.0000e+00 1.1647e-03 lowCoverage 9.9928e-01 6.6705e-02 lowCoverage 1.00000000 9.9560e-01 lowCoverage -0.1600781 2.9429e-02 lowCoverage 0.6005977 lowCoverage chr9 98178716 98179716 33806 HSD17B3 ENSG00000130948 0.646585 119 4 0.483405 131 6 0.479167 42 4 0.733796 109 6 0.626541 69 6 0.697883 142 6 0.461041 102 6 0.674336 78 4 0.575745 72 4 0.607937 45 4 0.62748 193 6 0.604167 38 4 0.6292517 72 4 0.4908144 65 6 0.401862 68 4 0.222222 7 0 0.857143 14 2 0.595667 118 4 0.628571 85 4 0.699006 92 6 0.518482 49 4 0.937500 9 0 0.58287 120 5 0.532765 66 4 0.575421 71 2 0.576133 128 6 0.585601 68 4 0.504762 45 4 0.701422 96 6 0.544448 114 6 0.6116246 109 6 0.65509 86 5 0.551672 135 6 0.450000 72 4 0.6287014 114 6 0.353333 25 2 0.483596 106 6 0.642505 133 6 0.796980 80 4 0.612596 121 6 0.606049 105 6 0.610644 53 2 0.718900 122 4 0.668238 0.486454 0.485000 0.703333 0.550017 0.680015 0.455773 0.569406 0.432682 0.468889 0.525631 0.593333 0.5385714 0.452515 0.503700 0.370236 0.731590 0.664525 0.778000 0.620329 0.584336 0.778881 0.571729 0.486121 0.703064 0.548987 0.516349 0.426667 0.684283 0.570278 0.6198992 0.578889 0.499468 0.576000 0.6932197 0.458416 0.5016789 0.6320126 0.740878 0.547269 0.578963 0.714118 0.661407 2 0.577965 0.563996 0.0128863 4 0.595901 0.50636 0.0895415 5.0509e-01 0.6232876 lowCoverage 1.0000000 1.00000 lowCoverage 0.83938070 0.79175118 lowCoverage 1.00000 1.00000 lowCoverage -0.0233792 0.6119389 lowCoverage 1 lowCoverage 0.577899 0.560684 0.0315301 4 0.595446 0.547937 0.0475089 2.3221e-02 3.4692e-01 lowCoverage 2.9026e-01 1.0000e+00 lowCoverage 5.6580e-02 5.6833e-01 lowCoverage 8.0828e-01 1.0000e+00 lowCoverage 0.0688299 2.3669e-01 lowCoverage 1.0000e+00 lowCoverage 0.578532 0.621622 -0.0288010 2 0.635501 0.721184 -0.0856824 7.6846e-01 3.2805e-02 lowCoverage 1.0000e+00 1.00000000 lowCoverage 9.2004e-01 0.01693856 lowCoverage 1.0000e+00 0.891503 lowCoverage -0.0819028 1.2605e-01 lowCoverage 1.000000 lowCoverage 0.564583 0.560684 0.01437730 6 0.562622 0.547937 0.014685 8.6193e-02 7.9113e-01 insignificant 9.1694e-01 1.0000e+00 insignificant 2.3474e-01 7.3007e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0922091 1.3264e-01 lowCoverage 1.0000e+00 lowCoverage 0.564718 0.621622 -0.0410439 4 0.570449 0.721184 -0.1507342 9.7399e-01 2.4817e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.7422e-01 1.1023e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage -0.0585236 2.7819e-01 lowCoverage 1.000000 lowCoverage 0.563793 0.620833 -0.056240 4 0.561633 0.681353 -0.1197198 4.3997e-01 6.5351e-03 lowCoverage 1.0000e+00 1.0713e-01 lowCoverage 6.8470e-01 1.4994e-02 lowCoverage 1.00000000 3.0494e-01 lowCoverage -0.1507327 3.1968e-02 lowCoverage 0.6393520 lowCoverage chr9 98486116 98487116 33810 C9orf21 ENSG00000158122 0.701737 416 17 0.728717 336 17 0.644136 263 16 0.657013 323 17 0.732182 359 17 0.695278 510 16 0.595061 381 17 0.695825 361 16 0.723463 253 17 0.736436 192 13 0.74922 655 16 0.669892 205 13 0.7399832 318 17 0.5899939 171 10 0.772392 269 15 0.681725 134 10 0.743591 274 6 0.755639 287 15 0.686408 203 12 0.640505 437 11 0.664658 81 6 0.594444 83 6 0.76365 278 12 0.790207 126 12 0.833961 283 14 0.726554 316 17 0.790399 165 7 0.686679 145 11 0.688670 319 17 0.609596 367 15 0.7394400 402 15 0.70313 528 16 0.619726 541 17 0.666633 283 16 0.6321544 373 16 0.363928 111 10 0.713678 315 17 0.760878 302 15 0.736818 398 16 0.683031 422 16 0.751061 424 16 0.765891 282 8 0.664936 328 16 0.794695 0.758389 0.740717 0.806440 0.782917 0.742487 0.740615 0.824666 0.790172 0.785764 0.803255 0.733283 0.8384295 0.766525 0.862489 0.811124 0.804016 0.837678 0.803911 0.785196 0.783543 0.768281 0.815219 0.803915 0.881730 0.837959 0.849829 0.791517 0.775756 0.802704 0.8088264 0.786167 0.712398 0.714597 0.6894059 0.578701 0.7474458 0.8060463 0.804163 0.802266 0.825438 0.861940 0.824735 5 0.776710 0.791127 -0.0112554 17 0.697788 0.73381 -0.0360179 9.0093e-01 0.0056895 weaklyHypometh 1.0000000 0.94824 insignificant 0.98091046 0.06994299 insignificant 1.00000 1.00000 insignificant -0.0189887 0.4394137 insignificant 1 insignificant 0.776604 0.715696 0.0634255 17 0.669006 0.647528 0.0214778 1.3639e-04 9.4733e-01 weaklyHypermeth 2.6743e-03 1.0000e+00 weaklyHypermeth 8.1733e-03 9.8910e-01 weaklyHypermeth 1.5421e-01 1.0000e+00 insignificant 0.0707935 2.7135e-01 insignificant 1.0000e+00 insignificant 0.777214 0.819310 -0.0192968 16 0.703466 0.711557 -0.0080912 6.1657e-01 7.6204e-03 weaklyHypometh 1.0000e+00 0.67033854 insignificant 8.2870e-01 0.01198274 weaklyHypometh 1.0000e+00 0.780916 insignificant -0.0233878 3.3956e-01 insignificant 1.000000 insignificant 0.789747 0.715844 0.07041067 17 0.692918 0.663549 0.029369 8.0318e-06 9.9795e-01 weaklyHypermeth 2.2948e-04 1.0000e+00 weaklyHypermeth 1.5650e-03 9.9935e-01 weaklyHypermeth 3.9124e-02 1.0000e+00 weaklyHypermeth 0.0897822 1.8475e-01 insignificant 1.0000e+00 insignificant 0.790598 0.819310 -0.0059196 16 0.714785 0.711557 0.0032275 1.7834e-01 1.6804e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.0359e-01 2.4567e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0043991 8.8108e-01 insignificant 1.000000 insignificant 0.715702 0.819310 -0.082013 16 0.643024 0.711557 -0.0685327 9.9088e-01 3.8234e-05 weaklyHypometh 1.0000e+00 1.3655e-03 weaklyHypometh 9.9995e-01 7.0115e-05 weaklyHypometh 1.00000000 5.8429e-03 weaklyHypometh -0.0941813 1.6606e-01 insignificant 1.0000000 insignificant chr9 99034016 99035016 33817 ZNF322B ENSG00000188801 0.883075 197 4 0.776996 291 4 0.512857 127 5 0.594505 68 4 0.424035 90 4 0.592008 279 4 0.463035 155 4 0.450659 145 4 0.617083 79 4 0.714638 55 4 0.74541 258 5 0.507058 65 4 0.5793102 88 4 0.4641631 80 4 0.478022 155 4 0.598947 64 4 0.383333 10 1 0.738422 128 4 0.550343 286 4 0.708798 192 4 0.620202 58 5 0.702125 79 4 0.40280 152 4 0.605895 134 5 0.481570 56 5 0.420296 289 5 0.712171 123 4 0.886654 58 4 0.562678 261 4 0.393057 394 5 0.7858448 407 5 0.69359 262 5 0.707735 145 5 0.552073 91 4 0.6666667 36 3 0.733333 11 0 0.759834 232 5 0.907848 283 5 0.818378 290 4 0.688019 108 4 0.274839 147 4 0.470215 59 4 0.624165 107 4 0.853898 0.721038 0.567135 0.596991 0.539940 0.593016 0.582000 0.569913 0.623679 0.708654 0.810177 0.634764 0.5850979 0.586410 0.480249 0.744065 0.502451 0.742337 0.552204 0.709866 0.690146 0.697909 0.505923 0.666034 0.569782 0.447321 0.719415 0.891777 0.714738 0.448259 0.8130218 0.695782 0.756780 0.547202 0.8589144 0.927305 0.8512749 0.8834658 0.770976 0.696230 0.340782 0.468313 0.620848 4 0.659317 0.619446 0.0183045 4 0.608669 0.59047 0.0182004 3.1214e-01 0.6652653 lowCoverage 1.0000000 1.00000 lowCoverage 0.91014702 0.27424750 lowCoverage 1.00000 1.00000 lowCoverage -0.0164383 0.7677597 lowCoverage 1 lowCoverage 0.659317 0.783208 -0.1555218 4 0.608669 0.722932 -0.1142630 9.9462e-01 1.1954e-04 lowCoverage 1.0000e+00 1.9923e-02 lowCoverage 9.9981e-01 2.2513e-04 lowCoverage 1.0000e+00 5.6283e-02 lowCoverage -0.1321132 4.2795e-02 lowCoverage 7.7757e-01 lowCoverage 0.659317 0.609001 0.0490345 4 0.608669 0.594967 0.0137024 3.3308e-01 7.9924e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 4.1537e-01 0.86528228 lowCoverage 1.0000e+00 1.000000 lowCoverage 0.0140118 8.9250e-01 lowCoverage 1.000000 lowCoverage 0.619446 0.783208 -0.17116784 5 0.590469 0.722932 -0.132463 9.8836e-01 8.5941e-04 weaklyHypometh 1.0000e+00 1.4323e-01 insignificant 9.9759e-01 1.5695e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.1156749 1.0346e-01 lowCoverage 1.0000e+00 lowCoverage 0.619446 0.609001 0.0406411 4 0.590469 0.594967 -0.0044980 4.3922e-01 5.2673e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 1.8485e-01 8.8670e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 0.0304502 7.8014e-01 lowCoverage 1.000000 lowCoverage 0.783208 0.609001 0.208627 4 0.722932 0.594967 0.1279655 6.0473e-03 9.8960e-01 lowCoverage 8.6390e-01 1.0000e+00 lowCoverage 6.2584e-03 9.9686e-01 lowCoverage 1.00000000 1.0000e+00 lowCoverage 0.1461251 2.1372e-01 lowCoverage 1.0000000 lowCoverage chr9 99633316 99634316 33844 ENSG00000213601 0.330447 325 9 0.179840 677 10 0.347298 351 10 0.298963 303 8 0.176571 258 10 0.311468 604 8 0.172230 342 10 0.212888 442 10 0.170066 442 10 0.187621 336 10 0.35783 503 10 0.160535 249 10 0.2124252 410 10 0.3192162 213 8 0.178308 478 10 0.221880 225 10 0.335888 105 6 0.332014 354 8 0.149367 451 10 0.138329 495 9 0.298454 163 10 0.156288 297 8 0.27571 332 10 0.161265 311 9 0.190784 129 8 0.211594 648 10 0.121359 314 10 0.186218 263 9 0.217275 413 9 0.102794 799 10 0.2752371 728 10 0.34270 529 9 0.270539 501 10 0.408355 156 10 0.4516509 631 7 0.104167 33 2 0.334299 420 9 0.563045 479 9 0.322890 403 8 0.171860 309 8 0.242935 281 8 0.223522 264 8 0.399178 313 8 0.205647 0.085890 0.286067 0.169526 0.125041 0.285996 0.109171 0.170431 0.127096 0.122440 0.296577 0.132473 0.1609089 0.251427 0.163593 0.172060 0.241755 0.254415 0.101081 0.137733 0.309908 0.139600 0.194191 0.119409 0.144810 0.139958 0.077725 0.163446 0.141495 0.063807 0.2460167 0.238242 0.195069 0.265336 0.2489905 0.209373 0.2796035 0.4314669 0.204617 0.122451 0.177255 0.143915 0.198994 8 0.185508 0.185546 0.0149823 10 0.205704 0.20766 -0.0019517 2.4216e-01 0.4864731 insignificant 1.0000000 1.00000 insignificant 0.37038932 0.92121760 insignificant 1.00000 1.00000 insignificant 0.0280194 0.3187071 insignificant 1 insignificant 0.185607 0.343694 -0.1193364 10 0.226275 0.373499 -0.1472244 9.0937e-01 3.6447e-11 weaklyHypometh 1.0000e+00 1.2149e-08 weaklyHypometh 9.9117e-01 3.3987e-03 weaklyHypometh 1.0000e+00 5.6645e-01 insignificant -0.1156834 1.3771e-01 insignificant 1.0000e+00 insignificant 0.185508 0.157962 0.0018734 8 0.205704 0.266282 -0.0605781 7.1543e-01 2.4740e-02 inconclusive 1.0000e+00 1.00000000 insignificant 6.4470e-01 0.28744564 insignificant 1.0000e+00 1.000000 insignificant -0.0324178 4.8751e-01 insignificant 1.000000 insignificant 0.185607 0.343694 -0.14883243 10 0.214136 0.373499 -0.159363 9.9586e-01 6.0879e-07 weaklyHypometh 1.0000e+00 1.2176e-04 weaklyHypometh 9.9659e-01 3.0128e-03 weaklyHypometh 1.0000e+00 7.5319e-01 insignificant -0.1437028 7.8891e-02 insignificant 1.0000e+00 insignificant 0.185546 0.157962 -0.0144119 8 0.207656 0.266282 -0.0586264 9.2195e-01 6.5287e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6917e-01 1.7586e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0604372 2.2758e-01 insignificant 1.000000 insignificant 0.343694 0.158062 0.108741 8 0.373499 0.292910 0.0805885 1.2789e-02 9.5495e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 6.8781e-02 9.6208e-01 insignificant 1.00000000 1.0000e+00 insignificant 0.0832655 3.0571e-01 insignificant 1.0000000 insignificant chr9 100026016 100027016 33867 TBC1D2 ENSG00000095383 0.867787 100 5 0.764604 96 5 0.725000 39 5 0.687466 75 4 0.782353 51 4 0.840332 73 5 0.502326 64 5 0.812585 87 5 0.416883 53 5 0.783333 19 2 0.88470 145 5 0.985714 20 1 0.7328598 83 5 0.7362056 58 5 0.795152 50 5 0.816667 19 1 1.000000 3 0 0.845483 93 2 0.790688 63 5 0.758095 26 2 0.833333 18 2 0.875000 5 0 0.72302 63 2 0.745476 50 5 0.755952 20 1 0.831173 96 5 0.520000 33 4 0.750000 9 1 0.814286 69 5 0.654009 98 5 0.8148361 69 5 0.77576 50 5 0.776809 78 5 0.744048 42 4 0.5612107 102 5 0.750000 12 1 0.601113 60 5 0.762500 71 5 0.573296 81 4 0.855588 73 5 0.827002 111 4 0.851282 36 1 0.819774 79 4 0.873895 0.782046 0.776144 0.865057 0.842215 0.860299 0.702326 0.864519 0.695009 0.901310 0.916118 0.957983 0.8254605 0.789605 0.851753 0.823529 0.913219 0.866203 0.777738 0.798319 0.901961 0.676443 0.759022 0.709384 0.795024 0.811296 0.597386 0.786081 0.872724 0.780420 0.8440421 0.882234 0.855538 0.737745 0.7143367 0.842407 0.9167303 0.8428922 0.848648 0.834827 0.846728 0.882856 0.871884 1 0.795230 0.782383 0.0117705 5 0.696416 0.78093 -0.0845135 7.2908e-01 0.9419742 insignificant 1.0000000 1.00000 insignificant 0.75354187 0.87556409 insignificant 1.00000 1.00000 insignificant 0.0186743 0.6509636 lowCoverage 1 lowCoverage 0.795717 0.783562 0.0164662 5 0.752534 0.631258 0.1212767 7.5724e-02 7.4804e-01 insignificant 8.0557e-01 1.0000e+00 insignificant 2.0083e-01 7.6871e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0771315 1.3762e-01 lowCoverage 1.0000e+00 lowCoverage 0.795717 0.860526 -0.0238656 4 0.752534 0.763294 -0.0107594 8.1845e-01 9.7359e-02 lowCoverage 1.0000e+00 1.00000000 lowCoverage 8.6355e-01 0.32214778 lowCoverage 1.0000e+00 1.000000 lowCoverage -0.0089767 8.8796e-01 lowCoverage 1.000000 lowCoverage 0.781629 0.783562 0.00816975 5 0.718337 0.631258 0.087080 8.0082e-02 6.3361e-01 insignificant 8.6110e-01 1.0000e+00 insignificant 1.9897e-01 7.7414e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0584573 2.4041e-01 lowCoverage 1.0000e+00 lowCoverage 0.781629 0.860526 -0.0384740 4 0.718337 0.763294 -0.0449563 8.9719e-01 1.7384e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.9058e-01 2.7051e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage -0.0276509 6.6131e-01 lowCoverage 1.000000 lowCoverage 0.783562 0.860526 -0.032396 4 0.631258 0.763294 -0.1320361 8.7752e-01 4.6495e-02 lowCoverage 1.0000e+00 5.8855e-01 lowCoverage 5.7988e-01 2.3438e-01 lowCoverage 1.00000000 1.0000e+00 lowCoverage -0.0861082 2.2782e-01 lowCoverage 1.0000000 lowCoverage chr9 100036316 100037316 33869 ENSG00000217269 0.652364 247 8 0.633580 219 8 0.655401 157 8 0.717013 124 8 0.759959 57 7 0.680172 323 8 0.742127 114 8 0.714360 109 8 0.710614 157 8 0.717051 112 8 0.68957 198 8 0.685674 98 8 0.7282418 159 8 NA 0 0 0.684207 155 8 0.734926 101 8 0.654779 115 8 0.735931 150 7 0.679613 145 8 0.693911 293 8 0.707007 98 5 0.678895 105 7 0.71940 162 8 0.735710 72 5 0.741373 57 7 0.693631 138 8 0.712595 116 8 0.647321 43 2 0.686353 96 8 0.703285 169 8 0.6968633 199 8 0.69989 436 8 0.608598 146 8 0.580304 128 8 0.6408730 68 6 0.685646 79 7 0.705179 79 8 0.654455 161 8 0.714946 208 8 0.714011 243 8 0.778827 139 8 0.722976 204 8 0.764946 139 8 0.667792 0.658832 0.655201 0.734782 0.776247 0.695017 0.726268 0.721869 0.722151 0.758299 0.707286 0.707581 0.7480493 NA 0.724391 0.751662 0.683839 0.729369 0.704490 0.684243 0.718450 0.668556 0.726800 0.728875 0.722682 0.692634 0.703649 0.603868 0.700449 0.719692 0.7238828 0.713476 0.622856 0.607958 0.6794086 0.708826 0.7228935 0.6347088 0.740518 0.724773 0.791547 0.714747 0.752501 6 0.698318 0.710231 -0.0013916 8 0.691001 0.69550 -0.0045036 7.2379e-01 0.5995038 insignificant 1.0000000 1.00000 insignificant 0.49153375 0.63813124 insignificant 1.00000 1.00000 insignificant -0.0034660 0.7502970 insignificant 1 insignificant 0.698318 0.647504 0.0554450 8 0.691001 0.647000 0.0440001 6.7203e-04 7.4624e-01 weaklyHypermeth 1.1017e-02 1.0000e+00 weaklyHypermeth 2.5796e-02 9.2001e-01 weaklyHypermeth 4.2288e-01 1.0000e+00 insignificant 0.0525518 3.9103e-02 weaklyHypermeth 7.3780e-01 insignificant 0.698318 0.722401 -0.0354843 8 0.691001 0.727915 -0.0369146 9.6340e-01 4.2504e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant 9.9542e-01 0.05859017 insignificant 1.0000e+00 1.000000 insignificant -0.0407468 3.6396e-02 weaklyHypometh 1.000000 insignificant 0.710231 0.647504 0.05683870 8 0.695504 0.647000 0.048504 3.4687e-03 8.9353e-01 weaklyHypermeth 5.1010e-02 1.0000e+00 weaklyHypermeth 4.9768e-02 8.7748e-01 weaklyHypermeth 7.2128e-01 1.0000e+00 insignificant 0.0560178 3.0800e-02 weaklyHypermeth 6.4167e-01 insignificant 0.710231 0.722401 -0.0311111 8 0.695504 0.727915 -0.0324110 9.6475e-01 5.0680e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9465e-01 1.6728e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0372808 4.9809e-02 weaklyHypometh 1.000000 insignificant 0.647504 0.722401 -0.090612 8 0.647000 0.727915 -0.0809148 9.6139e-01 1.9639e-04 weaklyHypometh 1.0000e+00 5.4552e-03 weaklyHypometh 9.9727e-01 7.1148e-03 weaklyHypometh 1.00000000 1.7353e-01 insignificant -0.0932986 3.4896e-03 weaklyHypometh 0.1453999 insignificant chr9 100118916 100119916 33877 TBC1D2 ENSG00000095383 0.771080 557 9 0.723264 410 10 0.610299 267 9 0.870947 519 9 0.742540 107 8 0.820420 683 9 0.797443 181 9 0.706280 288 8 0.823074 239 9 0.791848 184 8 0.85391 381 9 0.729880 99 8 0.6108268 349 8 0.8329795 132 7 0.706479 244 9 0.770652 105 7 0.650628 74 6 0.660817 632 9 0.887033 223 8 0.837717 431 10 0.902811 122 9 0.481690 212 7 0.84397 275 9 0.824912 169 9 0.869061 178 9 0.852692 511 9 0.752807 155 8 0.830143 111 7 0.838385 240 9 0.784511 449 10 0.8153868 629 10 0.91546 536 9 0.420467 254 9 0.501081 183 9 0.6646344 181 5 0.235421 80 4 0.349808 263 10 0.303995 465 9 0.483092 681 9 0.639123 506 9 0.592576 562 9 0.586286 464 8 0.606156 543 9 0.826508 0.706476 0.704969 0.848360 0.797237 0.824868 0.836701 0.757874 0.767228 0.851652 0.874029 0.756767 0.6445533 0.802713 0.793547 0.896047 0.754896 0.589866 0.828701 0.830889 0.897432 0.456747 0.816947 0.806069 0.890506 0.795680 0.790652 0.888750 0.752001 0.730038 0.7742976 0.890017 0.358589 0.342036 0.5798540 0.220296 0.3272032 0.2272401 0.476411 0.574977 0.561815 0.427270 0.511990 7 0.801966 0.816560 -0.0190630 9 0.786686 0.82980 -0.0431164 9.9654e-01 0.0646846 insignificant 1.0000000 1.00000 insignificant 0.99039772 0.08278981 insignificant 1.00000 1.00000 insignificant -0.0494130 0.2040161 insignificant 1 insignificant 0.801868 0.368163 0.4259324 9 0.765355 0.388774 0.3765809 3.2035e-39 1.0000e+00 hypermethylated 1.0678e-36 1.0000e+00 hypermethylated 9.7706e-14 9.9971e-01 hypermethylated 4.8853e-11 1.0000e+00 hypermethylated 0.3473380 1.9195e-03 weaklyHypermeth 9.1407e-02 weaklyHypermeth 0.801868 0.562772 0.2498769 9 0.765355 0.571790 0.1935647 2.3260e-23 9.9979e-01 hypermethylated 2.3260e-20 1.00000000 hypermethylated 2.6503e-13 0.99946800 hypermethylated 2.6503e-10 1.000000 hypermethylated 0.1784590 4.1670e-04 weaklyHypermeth 0.065665 weaklyHypermeth 0.816355 0.368163 0.44272282 9 0.812783 0.388774 0.424009 3.0001e-30 1.0000e+00 hypermethylated 7.5003e-28 1.0000e+00 hypermethylated 5.5260e-13 1.0000e+00 hypermethylated 2.7630e-10 1.0000e+00 hypermethylated 0.3967509 5.5982e-04 hypermethylated 3.4989e-02 hypermethylated 0.816355 0.562772 0.2744588 9 0.812783 0.571790 0.2409928 2.0381e-20 1.0000e+00 hypermethylated 2.0381e-17 1.0000e+00 hypermethylated 4.7045e-11 1.0000e+00 hypermethylated 4.7045e-08 1.00000000 hypermethylated 0.2278720 8.7936e-05 hypermethylated 0.087936 hypermethylated 0.368163 0.562772 -0.170010 9 0.388774 0.571790 -0.1830162 1.0000e+00 5.3619e-05 weaklyHypometh 1.0000e+00 1.7873e-03 weaklyHypometh 9.9981e-01 5.1234e-03 weaklyHypometh 1.00000000 1.3847e-01 insignificant -0.1688790 4.4047e-02 weaklyHypometh 0.8632040 insignificant chr9 100623416 100624416 33902 GALNT12 ENSG00000119514 0.759125 162 5 0.654354 107 5 0.770201 83 5 0.775931 115 5 0.769048 42 3 0.769735 110 3 0.695152 50 4 0.677124 63 3 0.791667 49 3 0.598611 57 3 0.71277 100 5 0.646465 32 2 0.7971212 73 5 0.7500000 28 2 0.930645 59 3 0.959936 27 2 0.923077 28 2 0.774763 145 5 0.879596 100 3 0.946474 86 3 0.690000 38 4 0.708333 15 2 0.78798 92 5 0.641758 43 3 0.875000 20 2 0.684405 110 5 0.688889 35 3 0.814286 37 3 0.782209 63 3 0.796882 77 3 0.6998039 88 3 0.71845 127 5 0.756373 47 3 0.778744 39 2 0.6305305 104 5 0.354762 22 2 0.626740 47 3 0.648345 97 3 0.857984 151 5 0.870947 136 5 0.774723 101 5 0.850971 107 5 0.837399 139 5 0.869178 0.760487 0.804870 0.904922 0.816138 0.900323 0.876964 0.900811 0.859954 0.883809 0.858496 0.713495 0.9379559 0.875963 0.930033 0.919106 0.863045 0.848607 0.910288 0.943435 0.764352 0.880351 0.900635 0.821683 0.951339 0.843279 0.793071 0.949074 0.891525 0.929147 0.8449800 0.871440 0.809300 0.772231 0.8048002 0.739308 0.7837980 0.8778621 0.937637 0.892417 0.884046 0.882484 0.941576 2 0.833443 0.829530 0.0149097 3 0.767757 0.73125 0.0365049 1.8888e-01 0.8046603 lowCoverage 1.0000000 1.00000 lowCoverage 0.41213804 0.62626374 lowCoverage 1.00000 1.00000 lowCoverage 0.0384237 0.2177775 lowCoverage 1 lowCoverage 0.833443 0.764045 0.0773339 3 0.767757 0.653379 0.1143783 5.9946e-04 9.9713e-01 lowCoverage 9.9909e-03 1.0000e+00 lowCoverage 1.7101e-03 9.9717e-01 lowCoverage 4.1709e-02 1.0000e+00 lowCoverage 0.1465074 6.4628e-02 lowCoverage 1.0000e+00 lowCoverage 0.833443 0.861199 -0.0415503 5 0.767757 0.839707 -0.0719502 9.8754e-01 4.4781e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant 9.9201e-01 0.08694691 insignificant 1.0000e+00 1.000000 insignificant -0.0593152 5.2097e-02 lowCoverage 1.000000 lowCoverage 0.829530 0.764045 0.06088359 3 0.731252 0.653379 0.077873 1.0276e-02 9.9359e-01 lowCoverage 1.3886e-01 1.0000e+00 lowCoverage 4.1670e-03 9.9908e-01 lowCoverage 9.4705e-02 1.0000e+00 lowCoverage 0.1080836 1.4589e-01 lowCoverage 1.0000e+00 lowCoverage 0.829530 0.861199 -0.0530327 3 0.731252 0.839707 -0.1084551 9.9690e-01 1.7691e-03 lowCoverage 1.0000e+00 3.7322e-01 lowCoverage 9.8459e-01 1.5468e-02 lowCoverage 1.0000e+00 1.00000000 lowCoverage -0.0977389 2.2710e-03 lowCoverage 0.283871 lowCoverage 0.764045 0.861199 -0.112949 3 0.653379 0.839707 -0.1863284 9.9999e-01 9.9040e-05 lowCoverage 1.0000e+00 2.9129e-03 lowCoverage 9.9991e-01 1.8082e-03 lowCoverage 1.00000000 6.4690e-02 lowCoverage -0.2058225 1.9363e-02 lowCoverage 0.4503068 lowCoverage chr9 100718516 100719516 33919 ENSG00000216332 0.878803 219 5 0.760872 195 7 0.682444 202 5 0.711473 159 6 0.649776 101 5 0.808998 262 5 0.773478 162 5 0.793196 157 5 0.788975 159 5 0.736727 133 4 0.91526 167 7 0.429127 90 4 0.8704315 101 4 0.3333333 3 0 0.831913 109 4 0.803030 46 4 0.866253 113 4 0.721400 131 5 0.824689 99 5 0.929384 220 5 0.821429 57 4 0.751921 80 4 0.90042 192 5 0.650656 101 5 0.615066 66 5 0.783775 226 5 0.755876 73 5 0.683993 60 4 0.791231 93 5 0.683092 245 5 0.7454100 297 7 0.71059 289 5 0.311025 256 6 0.621818 50 5 0.6294540 410 5 0.466106 94 7 0.610632 120 6 0.205533 275 5 0.881860 308 5 0.669636 225 5 0.473833 235 5 0.686010 158 4 0.677018 268 6 0.882752 0.829590 0.730434 0.883490 0.891878 0.895862 0.877319 0.777265 0.775087 0.849819 0.900407 0.837804 0.8406147 NA 0.830682 0.956466 0.832685 0.661012 0.916568 0.877985 1.000000 0.749019 0.850438 0.890039 0.857538 0.864122 0.851920 0.836079 0.745370 0.852272 0.8906778 0.909764 0.227519 0.566880 0.5376093 0.362975 0.7562892 0.2608437 0.824881 0.704993 0.649176 0.649193 0.828270 4 0.833333 0.852726 -0.0201284 5 0.683007 0.64042 0.0425861 4.5626e-01 0.4325230 insignificant 1.0000000 1.00000 insignificant 0.85406420 0.63148632 insignificant 1.00000 1.00000 insignificant 0.0143565 0.7239253 lowCoverage 1 lowCoverage 0.833629 0.506224 0.3438709 5 0.780579 0.471504 0.3090750 9.0443e-15 1.0000e+00 hypermethylated 5.3202e-13 1.0000e+00 hypermethylated 6.8584e-06 9.9993e-01 hypermethylated 5.7153e-04 1.0000e+00 hypermethylated 0.2813833 9.9584e-03 lowCoverage 2.9289e-01 lowCoverage 0.833628 0.752724 0.0961526 5 0.787173 0.663728 0.1234449 7.8674e-05 9.9671e-01 weaklyHypermeth 7.8674e-03 1.00000000 weaklyHypermeth 9.2076e-04 0.99903510 weaklyHypermeth 1.1509e-01 1.000000 insignificant 0.0778066 3.2325e-01 lowCoverage 1.000000 lowCoverage 0.853206 0.506224 0.35364252 5 0.731909 0.471504 0.260405 1.3560e-09 9.9981e-01 hypermethylated 7.5335e-08 1.0000e+00 hypermethylated 7.5252e-05 9.9895e-01 hypermethylated 3.9606e-03 1.0000e+00 hypermethylated 0.2670268 1.3611e-02 lowCoverage 3.3435e-01 lowCoverage 0.853206 0.752309 0.1138039 5 0.731909 0.615690 0.1162195 8.1912e-06 9.9885e-01 weaklyHypermeth 8.1912e-04 1.0000e+00 weaklyHypermeth 2.3360e-04 9.9987e-01 weaklyHypermeth 4.6719e-02 1.00000000 weaklyHypermeth 0.0634501 3.9629e-01 lowCoverage 1.000000 lowCoverage 0.506224 0.752309 -0.238717 5 0.471504 0.615690 -0.1441857 5.6285e-01 4.5962e-03 weaklyHypometh 1.0000e+00 7.9245e-02 weaklyHypometh 9.0196e-01 5.6713e-02 insignificant 1.00000000 9.1473e-01 insignificant -0.2035767 6.7703e-02 insignificant 1.0000000 insignificant chr9 106872516 106873516 33982 ABCA1 ENSG00000165029 0.774829 239 5 0.660172 109 5 0.566667 26 3 0.809559 238 5 0.702222 37 5 0.796936 166 5 0.745000 76 5 0.787778 98 5 0.750000 25 2 0.880000 19 3 0.78118 178 5 0.888889 9 0 0.7500000 18 0 0.7261905 27 2 0.804978 49 5 0.666667 3 0 NA 0 0 0.634411 293 5 0.864394 116 5 0.877778 102 5 0.838095 20 2 1.000000 11 0 0.82459 79 5 0.934524 26 2 0.767175 127 5 0.757401 122 5 0.744206 40 5 0.900000 13 0 0.882439 95 5 0.669048 103 5 0.8441288 113 5 0.79040 159 5 0.577048 142 5 0.617778 88 5 0.6382445 91 5 0.648148 27 2 0.493365 90 5 0.619491 149 5 0.742448 149 5 0.724234 193 5 0.786794 205 5 0.723746 156 5 0.810617 182 5 0.764604 0.777345 0.604478 0.794780 0.690547 0.708631 0.729478 0.775705 0.735075 0.865672 0.777441 0.854857 0.7201493 0.744136 0.815807 0.705603 NA 0.667573 0.848202 0.873134 0.818763 1.000000 0.829236 0.929104 0.751316 0.746804 0.766732 0.888060 0.868402 0.790689 0.8292486 0.772011 0.573269 0.600000 0.6650447 0.593698 0.8082264 0.6240393 0.726621 0.710670 0.773277 0.728969 0.788004 0 0.770285 0.812775 -0.0345792 5 0.767957 0.72030 0.0476585 9.9182e-01 0.2852589 insignificant 1.0000000 1.00000 insignificant 0.99663717 0.18500914 insignificant 1.00000 1.00000 insignificant -0.0678793 0.0527605 lowCoverage 1 lowCoverage 0.769694 0.603066 0.1441773 5 0.745448 0.464449 0.2809986 2.9392e-04 9.9564e-01 weaklyHypermeth 5.1565e-03 1.0000e+00 weaklyHypermeth 8.5204e-03 9.9895e-01 weaklyHypermeth 1.5778e-01 1.0000e+00 insignificant 0.1624429 1.4575e-04 lowCoverage 1.3250e-02 lowCoverage 0.770456 0.766102 0.0084371 5 0.775139 0.766078 0.0090619 4.8253e-01 6.4257e-01 insignificant 1.0000e+00 1.00000000 insignificant 2.2786e-01 0.93594710 insignificant 1.0000e+00 1.000000 insignificant 0.0038873 8.8638e-01 lowCoverage 1.000000 lowCoverage 0.812775 0.603419 0.18550002 5 0.720298 0.454292 0.266006 3.6347e-08 9.9884e-01 weaklyHypermeth 1.7308e-06 1.0000e+00 weaklyHypermeth 3.1870e-04 9.9999e-01 weaklyHypermeth 1.2748e-02 1.0000e+00 weaklyHypermeth 0.2303222 9.7723e-06 lowCoverage 1.6287e-03 lowCoverage 0.813466 0.766102 0.0458825 5 0.808418 0.766078 0.0423400 5.3695e-02 8.6187e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.2483e-03 9.9556e-01 weaklyHypermeth 5.7122e-01 1.00000000 insignificant 0.0717666 3.8821e-02 lowCoverage 1.000000 lowCoverage 0.605489 0.766102 -0.164919 5 0.636009 0.766078 -0.1300688 9.7251e-01 5.2482e-04 weaklyHypometh 1.0000e+00 1.1928e-02 weaklyHypometh 9.3789e-01 5.5302e-03 weaklyHypometh 1.00000000 1.4553e-01 insignificant -0.1585555 4.5985e-04 lowCoverage 0.0459850 lowCoverage chr9 109628316 109629316 34037 ENSG00000208966,ENSG00000223122 0.7996463 252 6 0.771148 173 6 0.6878307 54 6 0.878770 208 6 0.498016 53 6 0.772730 202 6 0.698413 33 4 0.886772 70 6 0.7583333 27 3 0.8916667 42 4 0.866368 183 6 0.7222222 21 3 0.8162622 85 6 0.673810 42 3 0.8333333 45 6 1.0000000 17 3 0.8333333 14 1 0.8524345 274 6 0.7474616 162 6 0.895825 162 6 0.644372 47 5 0.3333333 4 0 0.8760684 94 6 0.7809524 30 3 0.826667 19 3 0.8581232 155 6 0.715652 70 6 0.802778 24 1 0.6878216 186 6 0.8607143 141 6 0.6657941 223 6 0.7484226 164 6 0.7291667 125 6 0.6509756 104 4 0.7692308 227 6 0.555556 9 0 0.816676 93 3 0.7783426 295 6 0.8645324 205 6 0.8684087 201 6 0.7822937 185 6 0.7929660 213 6 0.8172207 177 6 0.7748317 0.7329466 0.6372801 0.8277121 0.6420796 0.729204 0.6726190 0.8995495 0.7054054 0.8249249 0.8552340 0.6486486 0.7853901 0.7500000 0.8500000 0.8768380 0.8448334 0.8357124 0.7579551 0.8837782 0.7192465 0.6009344 0.8529453 0.8891892 0.8090496 0.8276857 0.65623701 0.849550 0.6319438 0.8285714 0.6459123 0.7611010 0.6554054 0.5749405 0.70790021 0.68994024 0.941325 0.7901478 0.8443757 0.8427604 0.7349497 0.7547235 0.9219001 0 0.8431743 0.825411 3.0922e-02 6 0.734975 0.584291 0.15068361 1.6596e-01 9.1769e-01 insignificant 1.000000 1.000000 insignificant 0.52833199 0.57533570 insignificant 1.00000 1.00000 insignificant 0.06082719 0.2327480 lowCoverage 1.00000 lowCoverage 0.8435728 0.8487691 0.02593192 6 0.797475 0.7011059 0.0963689 3.0981e-01 8.9842e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.7004e-01 9.7624e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0775609 1.2849e-01 lowCoverage 8.4533e-01 lowCoverage 0.8435728 0.9072375 -0.04628264 6 0.797475 0.7681473 0.02932747 9.9152e-01 1.4536e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7782e-01 4.7426e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -3.0866e-02 3.1742e-01 lowCoverage 1.0000000 lowCoverage 0.826125 0.8485915 -0.00528390 6 0.6677613 0.6584067 0.00935460 6.1660e-01 7.9598e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.6529e-01 8.9058e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0167337 7.7843e-01 lowCoverage 1.0000e+00 lowCoverage 0.826125 0.9070480 -0.07726438 6 0.6677613 0.7350255 -0.06726416 9.9822e-01 7.0891e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 8.7757e-01 6.5044e-01 insignificant 1.0000e+00 1.00000000 insignificant -9.1693e-02 6.8572e-02 lowCoverage 1.0000000 lowCoverage 0.8487691 0.9072375 -6.6843e-02 6 0.7011059 0.7681473 -0.0670414 9.9809e-01 2.0757e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8833e-01 7.0667e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.10842646 4.1698e-02 lowCoverage 3.5640e-01 lowCoverage chr9 115350217 115351217 34203 RGS3 ENSG00000138835 0.6573994 239 5 0.713679 205 5 0.7430859 123 5 0.602003 242 5 0.738408 111 5 0.608192 313 5 0.878521 109 5 0.760562 206 5 0.7423377 105 5 0.8990099 81 5 0.721090 233 5 0.6650794 55 4 0.7447030 165 5 0.869444 31 3 0.7947471 169 5 0.5019481 38 4 0.4953704 39 3 0.5613784 291 5 0.7525342 261 5 0.741692 190 5 0.709669 87 5 0.2743506 82 3 0.7864860 169 5 0.7809840 108 5 0.830303 45 3 0.8142242 354 5 0.757863 100 5 0.966667 38 3 0.8008446 231 5 0.8279115 254 5 0.7684393 427 5 0.8398561 303 5 0.0214206 235 5 0.0447205 181 5 0.0054348 140 3 0.000000 91 4 0.014815 110 5 0.0213379 368 5 0.5593919 334 5 0.4336735 277 5 0.4933430 254 5 0.4751158 341 5 0.5296112 248 5 0.8192941 0.6927167 0.7657324 0.7931360 0.7113040 0.761614 0.8868295 0.8103779 0.7837000 0.9101513 0.8945108 0.6942727 0.8111782 0.8110195 0.7855222 0.5420481 0.6123083 0.5782953 0.7989901 0.8030391 0.8783967 0.4385504 0.8398662 0.8655476 0.7778555 0.8192045 0.76062219 0.987981 0.8080498 0.8437843 0.8179268 0.8310505 0.0080866 0.0493197 0.00455959 0.00257380 0.039316 0.0197509 0.5886965 0.4801732 0.5128256 0.5291943 0.5527217 3 0.7432938 0.797088 -4.3855e-02 5 0.688712 0.751817 -0.06310510 9.9623e-01 5.4103e-02 insignificant 1.000000 1.000000 insignificant 0.99879097 0.02726519 weaklyHypometh 1.00000 1.00000 insignificant -0.05357391 0.3365617 lowCoverage 1.00000 lowCoverage 0.7432938 0.0231111 0.74128588 5 0.688712 0.0180591 0.6706524 5.7203e-58 1.0000e+00 hypermethylated 5.7203e-56 1.0000e+00 hypermethylated 5.5149e-13 1.0000e+00 hypermethylated 2.2979e-11 1.0000e+00 hypermethylated 0.6916045 1.0719e-17 lowCoverage 1.0719e-14 lowCoverage 0.7439825 0.4614856 0.25786425 5 0.740740 0.4946252 0.24611432 1.3596e-16 9.9955e-01 hypermethylated 4.5321e-14 1.0000e+00 hypermethylated 4.6082e-09 9.9998e-01 hypermethylated 1.1520e-06 1.0000e+00 hypermethylated 2.1133e-01 9.9440e-06 lowCoverage 0.0024026 lowCoverage 0.797088 0.0231111 0.79147787 5 0.7518166 0.0180591 0.73375751 5.7495e-46 1.0000e+00 hypermethylated 4.4227e-44 1.0000e+00 hypermethylated 3.7216e-11 1.0000e+00 hypermethylated 1.6181e-09 1.0000e+00 hypermethylated 0.7451784 5.5145e-09 lowCoverage 6.1272e-07 lowCoverage 0.797538 0.4614856 0.29145872 5 0.7821800 0.4946252 0.28755473 8.4316e-14 9.9998e-01 hypermethylated 2.1079e-11 1.0000e+00 hypermethylated 2.3796e-07 1.0000e+00 hypermethylated 5.9491e-05 1.00000000 hypermethylated 2.6491e-01 1.6938e-04 lowCoverage 0.0247826 lowCoverage 0.0231936 0.4614856 -5.2432e-01 5 0.0216710 0.4946252 -0.4729543 1.0000e+00 1.1278e-26 hypomethylated 1.0000e+00 8.6754e-25 hypomethylated 1.0000e+00 3.9504e-08 hypomethylated 1.0000e+00 2.0792e-06 hypomethylated -0.48027231 7.6568e-06 lowCoverage 5.4691e-04 lowCoverage chr9 115965017 115966017 34209 COL27A1 ENSG00000196739 0.3940587 295 9 0.247330 355 9 0.4507416 173 8 0.335427 195 8 0.372215 165 8 0.447876 464 9 0.341232 190 9 0.363086 206 8 0.3922022 192 9 0.2473401 125 8 0.460579 347 9 0.2418860 95 8 0.2061174 203 7 0.379917 128 4 0.2479480 271 8 0.4305250 84 7 0.2085185 46 3 0.2422779 252 7 0.1311137 366 7 0.325521 370 9 0.441429 104 7 0.1499106 178 6 0.3312220 230 7 0.2720425 149 8 0.218531 80 7 0.4050963 414 9 0.247884 384 8 0.250583 121 7 0.2617301 204 8 0.2943319 450 9 0.2154893 607 9 0.5457782 366 9 0.0462502 265 9 0.0793267 228 9 0.2653289 186 5 0.011905 77 6 0.044640 260 9 0.1133154 393 9 0.2408094 425 9 0.1803772 422 9 0.2931141 354 8 0.0629007 247 7 0.2748294 291 8 0.3601856 0.1807202 0.3486737 0.3138227 0.2801132 0.354477 0.2975337 0.2764144 0.2525127 0.2608161 0.4027547 0.2291456 0.0938066 0.2519797 0.1772259 0.4323163 0.2264466 0.2086634 0.1453838 0.2787331 0.5008040 0.0630233 0.2767874 0.2518995 0.2115460 0.1870608 0.20694316 0.224351 0.2512411 0.1222407 0.1516762 0.5093058 0.0237219 0.0208169 0.19621797 0.00742115 0.034365 0.0358735 0.1334417 0.1069732 0.0982227 0.0726344 0.1644052 7 0.2932331 0.249163 3.5260e-02 9 0.397415 0.284994 0.11242115 9.3031e-02 9.9573e-01 insignificant 1.000000 1.000000 insignificant 0.28938874 0.98256739 insignificant 1.00000 1.00000 insignificant 0.02045985 0.6015323 insignificant 1.00000 insignificant 0.2930768 0.0801987 0.21402347 9 0.337156 0.0826650 0.2544914 1.0611e-19 1.0000e+00 hypermethylated 2.1655e-18 1.0000e+00 hypermethylated 2.0713e-14 1.0000e+00 hypermethylated 1.1507e-12 1.0000e+00 hypermethylated 0.2298346 5.2753e-04 hypermethylated 8.6481e-03 hypermethylated 0.2930768 0.1720368 0.14416281 8 0.337156 0.1897579 0.14739846 3.6273e-09 9.9934e-01 weaklyHypermeth 3.0227e-07 1.0000e+00 weaklyHypermeth 6.0716e-08 9.9997e-01 weaklyHypermeth 1.2143e-05 1.0000e+00 weaklyHypermeth 1.1289e-01 5.0292e-02 insignificant 0.6889342 insignificant 0.249009 0.0801987 0.17767005 9 0.2801598 0.0826650 0.19749480 6.2001e-10 1.0000e+00 weaklyHypermeth 7.5611e-09 1.0000e+00 weaklyHypermeth 1.8358e-11 1.0000e+00 weaklyHypermeth 8.7421e-10 1.0000e+00 weaklyHypermeth 0.2093747 1.0650e-03 weaklyHypermeth 1.6640e-02 weaklyHypermeth 0.249009 0.1720368 0.11103407 8 0.2801598 0.1897579 0.09040186 1.2611e-03 9.9919e-01 weaklyHypermeth 3.0759e-02 1.0000e+00 weaklyHypermeth 5.9111e-05 9.9993e-01 weaklyHypermeth 4.0451e-03 1.00000000 weaklyHypermeth 9.2430e-02 1.1226e-01 insignificant 1.0000000 insignificant 0.0801987 0.1720368 -8.5875e-02 8 0.0826650 0.1897579 -0.1070929 1.0000e+00 1.1039e-04 weaklyHypometh 1.0000e+00 1.2403e-03 weaklyHypometh 1.0000e+00 8.2079e-05 weaklyHypometh 1.0000e+00 1.6751e-03 weaklyHypometh -0.11694520 6.6927e-02 insignificant 4.8852e-01 insignificant chr9 116534917 116535917 34233 ENSG00000217734 0.6355581 173 6 0.668293 111 6 0.6518519 57 6 0.687169 116 6 0.705864 73 6 0.584544 95 6 0.619048 63 6 0.655303 45 3 0.7277778 50 6 0.7875000 41 6 0.687671 168 6 0.7750000 26 3 0.8301630 95 6 0.613248 58 6 0.8234127 55 6 0.6250000 20 0 1.0000000 3 0 0.6129104 199 6 0.7916667 42 6 0.750000 30 3 0.746032 20 3 0.6666667 11 0 0.6879085 69 6 0.8530612 37 6 0.902308 77 3 0.7777778 60 6 0.785714 24 3 0.861111 23 3 0.7271673 139 6 0.8248943 76 6 0.7550505 58 6 0.8027778 56 6 0.6414286 127 6 0.6526175 59 6 0.5943603 89 6 0.750000 12 0 0.563690 64 6 0.7321429 66 6 0.7576190 93 6 0.8395062 108 6 0.6975096 132 6 0.6078431 111 3 0.8340278 55 3 0.7065808 0.6033796 0.6911616 0.7291396 0.8203689 0.790883 0.6493506 0.7244318 0.7973485 0.9261364 0.7085496 0.6671315 0.7928607 0.7374709 0.9028680 0.6789773 0.7890548 0.7526314 0.7722538 0.7997159 0.7479718 0.7484018 0.7518939 0.8607143 0.8525685 0.8602273 0.59695865 0.723892 0.7528680 0.8794162 0.7611484 0.8769886 0.7775325 0.7001821 0.62433999 0.70454545 0.647267 0.7451299 0.7594481 0.8354377 0.6968913 0.8302139 0.7883523 2 0.7118421 0.758462 -4.3122e-02 6 0.634845 0.854997 -0.22015145 9.9970e-01 3.2755e-02 weaklyHypometh 1.000000 0.790123 insignificant 0.99994549 0.06384417 insignificant 1.00000 1.00000 insignificant -0.07094005 0.0272800 lowCoverage 1.00000 lowCoverage 0.7124750 0.6594724 0.04059045 6 0.697217 0.6514451 0.0457716 4.1642e-03 7.9638e-01 weaklyHypermeth 2.7040e-02 1.0000e+00 weaklyHypermeth 1.8417e-02 9.9144e-01 weaklyHypermeth 1.4167e-01 1.0000e+00 insignificant 0.0558924 1.6517e-01 lowCoverage 1.0000e+00 lowCoverage 0.7124750 0.7815631 -0.05816835 6 0.697217 0.7651827 -0.06796607 9.9452e-01 1.4149e-02 weaklyHypometh 1.0000e+00 3.2157e-01 insignificant 9.8362e-01 1.8056e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -3.5702e-02 4.9350e-01 lowCoverage 1.0000000 lowCoverage 0.753918 0.6594724 0.07685431 6 0.7341610 0.6514451 0.08271588 5.7238e-07 9.5174e-01 weaklyHypermeth 6.0250e-06 1.0000e+00 weaklyHypermeth 2.4456e-03 9.9898e-01 weaklyHypermeth 2.2436e-02 1.0000e+00 weaklyHypermeth 0.1268325 6.1055e-03 lowCoverage 6.7094e-02 lowCoverage 0.753918 0.7815631 -0.02264296 6 0.7341610 0.7651827 -0.03102174 9.1297e-01 2.7730e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.9035e-01 6.3851e-01 insignificant 1.0000e+00 1.00000000 insignificant 3.5238e-02 4.9281e-01 lowCoverage 1.0000000 lowCoverage 0.6594724 0.7815631 -1.0275e-01 6 0.6514451 0.7651827 -0.1137376 9.9269e-01 2.6996e-04 weaklyHypometh 1.0000e+00 2.8417e-03 weaklyHypometh 9.9939e-01 2.4421e-02 weaklyHypometh 1.0000e+00 2.0873e-01 insignificant -0.09159453 1.2538e-01 lowCoverage 7.6450e-01 lowCoverage chr9 117804717 117805717 34290 C9orf27 ENSG00000204148 0.5350877 75 6 0.538528 91 6 0.5972222 40 6 0.685507 65 6 0.658667 63 2 0.718878 44 6 0.426754 62 6 0.624908 86 6 0.6458333 39 2 0.7222222 27 2 0.710829 115 6 0.4696970 38 2 0.5814815 105 6 0.485213 74 6 0.6557143 67 2 0.3333333 30 2 0.8333333 6 0 0.4865053 67 5 0.7238095 27 4 0.743537 30 4 0.900000 14 0 0.6666667 18 0 0.6047078 57 2 0.6071429 20 0 0.750000 23 2 0.8035354 46 4 0.312500 20 2 0.550000 15 2 0.7678571 49 6 0.7738095 59 6 0.4915404 50 4 0.6150794 37 6 0.6222222 93 6 0.5657051 58 6 0.6688312 52 6 NA 0 0 0.528026 69 6 0.5721154 75 6 0.6868687 58 2 0.7281746 81 6 0.4704861 72 6 0.8492063 46 2 0.6735043 81 6 0.6097906 0.5558651 0.5779570 0.6633941 0.7397849 0.650346 0.3893605 0.6270471 0.6720430 0.6989247 0.6878991 0.4545455 0.6827957 0.7288382 0.5790323 0.3225806 0.8064516 0.6299735 0.6559140 0.6781874 0.7240545 0.6451613 0.7295769 0.5241935 0.7258065 0.8933692 0.44764729 0.547939 0.7056452 0.7123656 0.6342457 0.5952381 0.6415771 0.5474566 0.70276498 NA 0.520033 0.5769231 0.6647116 0.7073733 0.6070789 0.8279570 0.6539289 0 0.5864466 0.674877 -4.3273e-02 5 0.511295 0.587275 -0.07598029 9.0889e-01 1.6218e-01 insignificant 1.000000 1.000000 insignificant 0.83350477 0.08105804 insignificant 1.00000 1.00000 insignificant -0.04471684 0.4169639 lowCoverage 1.00000 lowCoverage 0.5864466 0.5606936 0.04466244 6 0.511295 0.5343250 -0.0230303 8.6732e-02 8.4490e-01 insignificant 4.5173e-01 1.0000e+00 insignificant 4.9834e-01 8.8207e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0174731 6.4542e-01 lowCoverage 1.0000e+00 lowCoverage 0.5913504 0.6272189 -0.02933411 6 0.591042 0.5145148 0.07652678 7.6312e-01 1.4622e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.4246e-01 2.1043e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -7.2795e-02 3.2250e-01 lowCoverage 1.0000000 lowCoverage 0.675676 0.5619597 0.08549724 5 0.6247955 0.5766591 0.04813638 1.3240e-01 9.9501e-01 insignificant 6.7209e-01 1.0000e+00 insignificant 2.8538e-01 9.8773e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0621900 2.5159e-01 lowCoverage 1.0000e+00 lowCoverage 0.675063 0.6272189 0.01324664 5 0.5823081 0.5145148 0.06779335 5.8096e-01 8.9332e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.8209e-01 7.0767e-01 insignificant 1.0000e+00 1.00000000 insignificant -2.8078e-02 7.2255e-01 lowCoverage 1.0000000 lowCoverage 0.5591716 0.6272189 -8.1828e-02 6 0.5116563 0.5145148 -0.0028585 9.9835e-01 2.3955e-02 weaklyHypometh 1.0000e+00 1.6752e-01 insignificant 9.9761e-01 8.3294e-02 insignificant 1.0000e+00 5.7051e-01 insignificant -0.09026807 2.2660e-01 lowCoverage 1.0000e+00 lowCoverage chr9 119904117 119905117 34360 ENSG00000184353 0.6815476 81 5 0.804101 136 5 0.5539683 52 5 0.862434 69 4 0.503333 16 1 0.808247 174 5 0.680556 32 4 0.806298 68 5 0.6232323 43 4 0.7533333 30 2 0.736221 112 5 0.6666667 13 0 0.8300000 51 5 0.666667 16 0 0.8000000 47 5 0.5000000 9 0 0.5000000 2 0 0.7879365 67 5 0.8416667 54 4 0.732340 126 5 0.876667 22 3 0.8365385 42 4 0.7200000 55 5 0.6377778 30 4 0.790000 20 2 0.8307225 110 5 0.719341 86 4 0.718750 28 4 0.8235877 76 5 0.8347609 84 5 0.7821891 104 5 0.7414915 173 5 0.5352778 76 5 0.5200000 22 2 0.7125000 79 4 0.750000 4 0 0.487990 69 4 0.7176962 95 5 0.7725490 61 4 0.7718182 67 5 0.9272727 57 4 0.7166667 36 2 0.7787330 62 4 0.7532895 0.7963741 0.5446951 0.8683340 0.4605263 0.811515 0.7309942 0.7633473 0.7171717 0.7916667 0.7536085 0.6929825 0.8256579 0.5614035 0.8442982 0.7532848 0.6592592 0.8036759 0.7982456 0.7500084 0.8486842 0.7914980 0.7618421 0.7333333 0.7401316 0.7978783 0.70070127 0.706423 0.8518867 0.8026825 0.7713990 0.7508511 0.5365497 0.5019737 0.76973684 0.68648592 0.524784 0.6707766 0.8323013 0.7834928 0.9043062 0.8048246 0.8115920 0 0.7712855 0.792771 -7.7485e-03 5 0.758791 0.781843 -0.02305186 6.3931e-01 1.9727e-01 insignificant 1.000000 1.000000 insignificant 0.64860715 0.34534028 insignificant 1.00000 1.00000 insignificant -0.06905806 0.0463522 lowCoverage 1.00000 lowCoverage 0.7712855 0.6463768 0.13240725 5 0.758791 0.6436678 0.1151233 3.1938e-04 9.9545e-01 weaklyHypermeth 2.4381e-03 1.0000e+00 weaklyHypermeth 1.1179e-02 9.9196e-01 weaklyHypermeth 8.9436e-02 1.0000e+00 weaklyHypermeth 0.0863500 1.5372e-01 lowCoverage 9.6074e-01 lowCoverage 0.7712855 0.8162544 -0.05669375 4 0.758791 0.7850329 -0.02624185 8.4650e-01 7.6655e-02 lowCoverage 1.0000e+00 9.2355e-01 lowCoverage 9.7191e-01 3.0018e-02 lowCoverage 1.0000e+00 6.9601e-01 lowCoverage -8.6481e-02 8.1299e-02 lowCoverage 0.9453422 lowCoverage 0.792771 0.6463768 0.14461277 5 0.7818429 0.6436678 0.13817511 8.1402e-05 9.9990e-01 weaklyHypermeth 6.6723e-04 1.0000e+00 weaklyHypermeth 9.1870e-03 9.9945e-01 weaklyHypermeth 7.4691e-02 1.0000e+00 weaklyHypermeth 0.1554081 2.1301e-02 lowCoverage 1.8363e-01 lowCoverage 0.792771 0.8162544 -0.05859019 4 0.7818429 0.7850329 -0.00318999 4.9367e-01 1.1708e-02 lowCoverage 1.0000e+00 4.8347e-01 lowCoverage 8.5603e-01 1.5336e-02 lowCoverage 1.0000e+00 0.90213494 lowCoverage -1.7422e-02 6.8097e-01 lowCoverage 1.0000000 lowCoverage 0.6463768 0.8162544 -1.9106e-01 4 0.6436678 0.7850329 -0.1413651 9.4560e-01 8.4937e-05 lowCoverage 1.0000e+00 9.7629e-04 lowCoverage 9.9931e-01 1.0830e-03 lowCoverage 1.0000e+00 1.5041e-02 lowCoverage -0.17283056 1.8431e-02 lowCoverage 2.0944e-01 lowCoverage chr9 122670217 122671217 34420 PSMD5 ENSG00000095261 0.2646545 524 10 0.194468 452 15 0.1135026 478 15 0.235109 495 12 0.155967 397 14 0.334584 586 16 0.155883 525 14 0.156457 452 12 0.1492742 474 12 0.2234812 568 13 0.306429 553 15 0.0322712 513 10 0.1933952 565 13 0.206223 200 9 0.1378852 523 10 0.0785185 538 10 0.0810598 399 8 0.2019517 654 12 0.2155269 368 12 0.265574 427 17 0.142045 107 8 0.3373977 326 8 0.2572658 307 13 0.2002417 253 14 0.210858 702 12 0.2109441 478 15 0.183289 344 12 0.058183 170 10 0.1795170 374 12 0.3258469 580 19 0.2300763 689 16 0.3006350 429 13 0.1107096 299 15 0.1648882 365 12 0.0885585 197 12 0.178045 268 16 0.218761 195 14 0.1804141 454 19 0.2005210 489 14 0.2743957 391 16 0.2702665 377 8 0.1506527 424 8 0.1978334 306 9 0.0545943 0.0359377 0.0340874 0.0497602 0.0249564 0.059070 0.0581683 0.0730748 0.0278448 0.0546557 0.0491436 0.0187402 0.0410804 0.0507586 0.0452017 0.0424284 0.1364578 0.0618353 0.0584835 0.0342231 0.0738069 0.0408984 0.0874229 0.0626458 0.0507181 0.0525418 0.06321469 0.079000 0.0691019 0.0412203 0.0416441 0.0642505 0.0228917 0.0525718 0.02877681 0.06372039 0.083076 0.0389526 0.0602576 0.0625083 0.0517180 0.0360740 0.0950781 6 0.0847965 0.110690 -7.7335e-04 12 0.193103 0.190925 0.00217843 8.4198e-01 9.9277e-01 insignificant 1.000000 1.000000 insignificant 0.99383262 0.96771302 insignificant 1.00000 1.00000 insignificant -0.03458091 0.2386805 insignificant 1.00000 insignificant 0.0848930 0.1106719 0.00215828 12 0.219198 0.1966601 0.0225380 2.6800e-01 9.9454e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.8702e-01 9.8913e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0282147 3.0018e-01 insignificant 1.0000e+00 insignificant 0.0833074 0.1595370 -0.00447655 9 0.216690 0.2539676 -0.03727722 8.8647e-01 9.2764e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.5717e-01 8.4143e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -3.3623e-02 2.7996e-01 insignificant 1.0000000 insignificant 0.111556 0.1119235 0.00649014 13 0.2321667 0.2059290 0.02623773 9.1951e-01 1.0000e+00 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6644e-01 1.0000e+00 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0627956 5.4943e-02 insignificant 4.0104e-01 insignificant 0.110405 0.1595370 -0.00061294 9 0.2097977 0.2539676 -0.04416991 9.8675e-01 9.6218e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7211e-01 9.9655e-01 insignificant 1.0000e+00 1.00000000 insignificant 9.5778e-04 9.7724e-01 insignificant 1.0000000 insignificant 0.1109215 0.1595370 -5.4409e-03 9 0.2081301 0.2539676 -0.0458375 9.9935e-01 9.9522e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9993e-01 9.8518e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.06183783 7.8146e-02 insignificant 5.5423e-01 insignificant chr9 122714917 122715917 34425 PHF19 ENSG00000119403 0.7336511 217 5 0.758666 89 5 0.7627566 114 5 0.931836 242 5 0.648944 61 5 0.780351 345 5 0.937911 106 5 0.793637 94 5 0.8024943 85 5 0.8882769 143 5 0.864172 152 7 0.9266063 99 5 0.6500722 128 5 0.657035 85 4 0.7592090 157 5 0.7842105 78 4 0.6828571 32 4 0.9087041 294 5 0.8831169 128 6 0.749750 208 5 0.782931 48 5 0.8134251 85 5 0.8214286 77 6 0.7450499 57 4 0.930333 186 5 0.7710327 123 5 0.873016 48 3 0.691500 71 4 0.9011996 110 5 0.9423463 128 5 0.7832731 138 6 0.8139043 235 5 0.8121774 115 5 0.8942308 68 5 1.0000000 46 2 0.662255 84 5 0.894813 115 5 0.8143762 131 6 0.9368811 262 5 0.9429827 184 5 0.9393152 211 5 0.7464954 215 5 0.8271184 247 5 0.8848422 0.8812911 0.8531715 0.9140205 0.9453714 0.887227 0.9090385 0.8891639 0.7437138 0.9224924 0.9217278 0.8875452 0.8021309 0.9107300 0.8779966 0.8464518 0.8395338 0.8891440 0.9315068 0.8860183 0.9243314 0.8523053 0.9372146 0.8242838 0.9021165 0.8984428 0.89331014 0.805537 0.8754347 0.9104134 0.8913676 0.9343648 0.7512468 0.9407271 0.91291532 0.77444265 0.857439 0.9607574 0.8975918 0.9293851 0.9404161 0.8617094 0.9686005 4 0.8830123 0.897397 -8.5061e-03 5 0.831077 0.810742 0.02033488 6.3765e-01 3.5328e-01 insignificant 1.000000 1.000000 insignificant 0.64151577 0.55461611 insignificant 1.00000 1.00000 insignificant -0.02724048 0.3825966 lowCoverage 1.00000 lowCoverage 0.8830123 0.8711986 0.02193122 5 0.831077 0.8073566 0.0237202 3.9595e-02 6.5230e-01 weaklyHypermeth 2.2370e-01 1.0000e+00 insignificant 2.9767e-01 4.5655e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0510959 3.4873e-01 lowCoverage 1.0000e+00 lowCoverage 0.8830123 0.9213584 -0.03240804 5 0.831077 0.8052218 0.02585501 8.1092e-01 6.9028e-02 insignificant 1.0000e+00 8.7378e-01 insignificant 9.1301e-01 1.3522e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -8.3346e-02 1.0924e-01 insignificant 1.0000000 insignificant 0.897397 0.8711986 0.03271800 5 0.8107419 0.8073566 0.00338530 1.5236e-01 6.3090e-01 insignificant 7.6776e-01 1.0000e+00 insignificant 3.9720e-01 4.7209e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0238554 6.5516e-01 lowCoverage 1.0000e+00 lowCoverage 0.897397 0.9213584 -0.02112399 5 0.8107419 0.8052218 0.00552013 8.9027e-01 1.6977e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.9181e-01 1.5185e-01 insignificant 1.0000e+00 1.00000000 insignificant -5.6105e-02 2.5740e-01 lowCoverage 1.0000000 lowCoverage 0.8711986 0.9213584 -4.7001e-02 5 0.8073566 0.8052218 0.0021348 9.6893e-01 1.5501e-01 insignificant 1.0000e+00 8.1284e-01 insignificant 9.3920e-01 4.1119e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03224986 6.0936e-01 lowCoverage 1.0000e+00 lowCoverage chr9 122721417 122722417 34426 PHF19 ENSG00000119403 0.8379890 228 7 0.808066 288 7 0.8384907 136 6 0.813647 235 7 0.763614 90 6 0.801062 362 7 0.787946 84 5 0.851767 250 7 0.8157129 172 7 0.8920460 175 7 0.844195 286 7 0.5608696 71 5 0.8127880 254 7 0.873846 114 5 0.7200213 202 7 0.9222222 47 2 0.6761905 24 3 0.5711825 326 7 0.8570762 189 7 0.861270 309 7 0.633787 53 4 0.6025589 141 7 0.8617402 174 7 0.7884112 121 6 0.769231 98 7 0.8446896 332 7 0.710345 160 7 0.810855 100 5 0.8634339 220 7 0.9225455 417 7 0.8585054 436 7 0.9069577 322 7 0.5740233 212 7 0.5979830 118 7 0.7606516 219 7 0.017857 47 4 0.709739 168 7 0.1065125 327 7 0.7370523 163 7 0.7534447 204 7 0.7420635 129 7 0.6630117 171 7 0.7575660 221 7 0.8484388 0.7668049 0.7995634 0.8329452 0.8235591 0.842304 0.8332707 0.8568836 0.7997613 0.8681495 0.8454028 0.6731745 0.7863956 0.8301114 0.7565539 0.8529308 0.7571581 0.5475768 0.8015888 0.8716640 0.6503460 0.5669398 0.8512750 0.7870092 0.7322250 0.8462714 0.76342432 0.773486 0.8540965 0.8920075 0.8441121 0.9051045 0.5872828 0.6770716 0.75854701 0.22533663 0.728685 0.0924827 0.7063984 0.7227359 0.7028134 0.6783267 0.7248997 5 0.7935971 0.825952 -3.2771e-02 7 0.791703 0.833365 -0.04166129 9.7214e-01 7.8381e-02 insignificant 1.000000 1.000000 insignificant 0.56558567 0.50956515 insignificant 1.00000 1.00000 insignificant -0.00225484 0.9514225 insignificant 1.00000 insignificant 0.7935971 0.4546288 0.31763049 7 0.791703 0.4636268 0.3280765 4.1046e-15 1.0000e+00 hypermethylated 6.1262e-14 1.0000e+00 hypermethylated 2.7424e-06 9.9892e-01 hypermethylated 4.3530e-05 1.0000e+00 hypermethylated 0.3343725 4.9285e-02 weaklyHypermeth 3.7623e-01 insignificant 0.7935971 0.7105856 0.08018660 7 0.791703 0.7266674 0.06503580 4.8240e-03 9.7168e-01 weaklyHypermeth 8.9333e-02 1.0000e+00 weaklyHypermeth 2.3611e-03 9.9416e-01 weaklyHypermeth 7.8705e-02 1.0000e+00 weaklyHypermeth 6.4873e-02 3.1069e-02 weaklyHypermeth 0.5356660 insignificant 0.825952 0.4546288 0.36341170 7 0.8333645 0.4636268 0.36973778 6.8313e-15 1.0000e+00 hypermethylated 1.2889e-13 1.0000e+00 hypermethylated 8.2806e-06 9.8935e-01 hypermethylated 1.3356e-04 1.0000e+00 hypermethylated 0.3366273 4.8072e-02 weaklyHypermeth 3.5875e-01 insignificant 0.825952 0.7105856 0.11474787 7 0.8333645 0.7266674 0.10669709 3.2084e-05 9.9922e-01 weaklyHypermeth 1.4584e-03 1.0000e+00 weaklyHypermeth 4.6658e-03 9.9001e-01 weaklyHypermeth 1.5553e-01 1.00000000 insignificant 6.7127e-02 6.9020e-02 insignificant 1.0000000 insignificant 0.4546288 0.7105856 -2.4085e-01 7 0.4636268 0.7266674 -0.2630407 9.9990e-01 1.2645e-05 hypomethylated 1.0000e+00 1.5420e-04 hypomethylated 9.9164e-01 2.7566e-03 weaklyHypometh 1.0000e+00 3.3212e-02 weaklyHypometh -0.26949995 9.2690e-02 insignificant 6.1793e-01 insignificant chr9 125119317 125120317 34492 STRBP ENSG00000165209 0.5866071 135 6 0.645053 213 6 0.5884039 127 6 0.662062 132 6 0.634503 86 6 0.734239 375 6 0.601091 78 6 0.823420 164 6 0.6481481 88 6 0.6875000 92 6 0.755343 316 6 0.5611111 25 4 0.7627324 119 6 0.692752 113 6 0.6760795 110 6 0.5833333 48 6 0.3333333 3 0 0.6730447 120 6 0.6796537 124 6 0.669141 307 6 0.861722 62 6 0.6725694 58 6 0.7322222 148 6 0.6427213 107 6 0.595238 34 6 0.5447228 366 6 0.655770 104 6 0.652778 30 4 0.7798701 110 6 0.7112678 261 6 0.6603534 280 6 0.7390192 299 6 0.5623658 142 6 0.6833333 44 6 0.4880976 226 6 0.805556 17 0 0.664406 107 6 0.6275590 200 6 0.7299374 89 6 0.7236348 134 6 0.6074100 84 6 0.7666667 45 6 0.7732129 74 6 0.7827014 0.6994735 0.5954177 0.7513773 0.6457115 0.654014 0.6198523 0.8264028 0.6645284 0.7012346 0.7583579 0.5617284 0.7692377 0.6988433 0.6839639 0.5925926 0.4944614 0.7368455 0.6872107 0.6774077 0.8480532 0.7351509 0.7429630 0.7730317 0.6058201 0.7310031 0.71282680 0.663272 0.7550772 0.7171439 0.7230580 0.6607141 0.5882379 0.6940035 0.65150122 0.80452675 0.553894 0.6735494 0.7372841 0.7207646 0.6178068 0.6995885 0.7782706 4 0.6774775 0.695535 -2.4084e-02 6 0.643012 0.661662 -0.01864923 9.3738e-01 1.1498e-01 insignificant 1.000000 1.000000 insignificant 0.88205565 0.04073639 weaklyHypometh 1.00000 1.00000 insignificant -0.03747697 0.2669195 insignificant 1.00000 insignificant 0.6774775 0.6290761 0.05009630 6 0.643012 0.5635686 0.0794438 5.4779e-05 8.9897e-01 weaklyHypermeth 4.4536e-04 1.0000e+00 weaklyHypermeth 1.8858e-02 4.5272e-01 weaklyHypermeth 1.4286e-01 1.0000e+00 insignificant 0.0113247 8.2569e-01 insignificant 1.0000e+00 insignificant 0.6774775 0.7230047 -0.01462447 6 0.643012 0.7366529 -0.09364057 9.4857e-01 2.2706e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8928e-01 1.6228e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -7.0295e-02 9.1440e-02 insignificant 1.0000000 insignificant 0.695535 0.6290761 0.07483377 6 0.6616616 0.5635686 0.09809298 2.5286e-05 9.8501e-01 weaklyHypermeth 2.2377e-04 1.0000e+00 weaklyHypermeth 9.4357e-03 9.1734e-01 weaklyHypermeth 7.6094e-02 1.0000e+00 weaklyHypermeth 0.0488017 3.6289e-01 insignificant 1.0000e+00 insignificant 0.695535 0.7230047 0.00888557 6 0.6616616 0.7366529 -0.07499134 7.0598e-01 6.0892e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.0828e-01 6.2179e-01 insignificant 1.0000e+00 1.00000000 insignificant -3.2818e-02 4.1482e-01 insignificant 1.0000000 insignificant 0.6290761 0.7230047 -7.8947e-02 6 0.5635686 0.7366529 -0.1730843 9.8161e-01 1.3797e-03 weaklyHypometh 1.0000e+00 1.2658e-02 weaklyHypometh 9.2753e-01 4.1944e-02 weaklyHypometh 1.0000e+00 3.2769e-01 insignificant -0.08161954 1.6376e-01 insignificant 9.7476e-01 insignificant chr9 125141417 125142417 34496 STRBP ENSG00000165209 0.7549944 630 17 0.492859 824 17 0.7449804 545 17 0.771550 640 17 0.733927 330 17 0.833091 870 17 0.505022 634 17 0.672922 424 17 0.6715658 521 14 0.6469159 320 15 0.687983 717 17 0.7224364 244 14 0.5651917 429 14 0.662855 264 14 0.7109228 457 14 0.8286841 161 14 0.5202797 80 7 0.7111211 642 15 0.7031706 494 17 0.833429 615 17 0.695982 177 13 0.5924663 301 15 0.6540034 475 15 0.6602718 270 18 0.789568 333 15 0.6929160 792 17 0.653915 432 15 0.465177 212 14 0.7795037 446 15 0.6106831 890 17 0.7385112 1125 17 0.7290786 850 17 0.6950608 620 17 0.7691925 564 17 0.8187727 599 12 0.656989 166 13 0.644818 411 17 0.7125000 800 17 0.8119854 991 17 0.8268372 640 17 0.7265592 617 15 0.7548879 554 15 0.7864736 635 15 0.7395332 0.5346925 0.7129358 0.7904546 0.7695022 0.841916 0.5562087 0.6602033 0.7269087 0.7876946 0.7500797 0.7370802 0.6009874 0.8224181 0.7663758 0.8139787 0.6371985 0.7247944 0.8186871 0.8222626 0.7397164 0.5851804 0.7162070 0.7891295 0.8132710 0.8123805 0.63361600 0.684393 0.8208406 0.7006071 0.7778740 0.7365370 0.6475040 0.7876072 0.83926332 0.66568679 0.820128 0.8134234 0.8120051 0.8078269 0.7399300 0.7945244 0.7904169 13 0.7047048 0.706662 -4.2611e-03 17 0.607584 0.529899 0.07768494 8.6713e-01 8.6498e-01 insignificant 1.000000 1.000000 insignificant 0.85153479 0.98225228 insignificant 1.00000 1.00000 insignificant 0.01685537 0.6289352 insignificant 1.00000 insignificant 0.7050448 0.7713743 -0.07887859 17 0.643949 0.6936597 -0.0497110 9.6318e-01 3.3177e-06 weaklyHypometh 1.0000e+00 5.5295e-04 weaklyHypometh 9.8823e-01 3.8712e-03 weaklyHypometh 1.0000e+00 4.3013e-01 insignificant -0.0275270 4.5383e-01 insignificant 1.0000e+00 insignificant 0.7054690 0.7637475 -0.06763682 17 0.691750 0.7484025 -0.05665282 9.9814e-01 9.0207e-06 weaklyHypometh 1.0000e+00 1.1276e-03 weaklyHypometh 9.8885e-01 7.7704e-05 weaklyHypometh 1.0000e+00 9.7130e-03 weaklyHypometh -9.2654e-02 5.6353e-03 weaklyHypometh 0.1523049 insignificant 0.708287 0.7708861 -0.07739750 17 0.6324985 0.6333415 -0.00084292 9.0865e-01 1.5782e-04 weaklyHypometh 1.0000e+00 2.2546e-02 weaklyHypometh 9.7155e-01 1.0620e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0443824 2.5833e-01 insignificant 1.0000e+00 insignificant 0.708607 0.7637475 -0.06833700 17 0.7081926 0.7484025 -0.04020996 9.5827e-01 1.8905e-06 weaklyHypometh 1.0000e+00 6.3016e-04 weaklyHypometh 9.8815e-01 5.0659e-05 weaklyHypometh 1.0000e+00 0.01266485 weaklyHypometh -1.0951e-01 3.6073e-03 weaklyHypometh 0.1865583 insignificant 0.7727705 0.7637475 1.1255e-02 17 0.7537141 0.7484025 0.0053116 3.8462e-01 4.6544e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.2365e-01 6.8825e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.06512655 8.1513e-02 insignificant 5.7002e-01 insignificant chr9 125801217 125802217 34517 DENND1A ENSG00000119522 0.0216681 1640 65 0.021982 1768 68 0.0034088 2187 74 0.019352 1425 48 0.020782 1769 55 0.077189 1838 74 0.017840 2431 75 0.049759 1588 69 0.0330543 1855 66 0.0267234 1513 66 0.015752 2526 72 0.0106829 2287 68 0.0219685 1809 72 0.000000 45 4 0.0124895 2334 72 0.0321633 1884 64 0.0151333 1821 65 0.0101007 1516 54 0.0130797 1650 74 0.065041 1897 68 0.058335 699 55 0.0435046 1099 54 0.0642157 1446 64 0.0585901 952 66 0.050288 761 40 0.0104042 2579 70 0.039539 1139 62 0.035855 817 54 0.0415807 1104 68 0.0088853 2662 73 0.0070460 2893 75 0.0228715 2116 72 0.0165563 1373 63 0.0383061 1285 66 0.0287115 1036 40 0.018236 794 41 0.041881 608 59 0.0392949 1670 68 0.0263277 2067 67 0.0162536 1883 61 0.0382877 1415 40 0.0165826 1862 53 0.0477245 2188 61 0.0059729 0.0185220 0.0073037 0.0079205 0.0081685 0.028628 0.0049278 0.0158824 0.0223848 0.0109869 0.0099751 0.0062644 0.0079333 NA 0.0073354 0.0069734 0.0130401 0.0036222 0.0119529 0.0225095 0.0274009 0.0131676 0.0370933 0.0242973 0.0209449 0.0062125 0.01217982 0.018800 0.0105851 0.0044225 0.0037562 0.0088943 0.0114216 0.0114547 0.00666664 0.00741192 0.021811 0.0115574 0.0078001 0.0046423 0.0062452 0.0040853 0.0205827 25 0.0159573 0.017025 3.8159e-04 69 0.030566 0.029827 0.00073841 9.8334e-01 8.8444e-01 insignificant 1.000000 1.000000 insignificant 0.99439056 0.81032458 insignificant 1.00000 1.00000 insignificant -0.01235112 0.1035960 insignificant 1.00000 insignificant 0.0159325 0.0156666 0.00015168 67 0.029126 0.0318985 -0.0027724 4.3696e-01 3.6581e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.8680e-01 9.9066e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0060891 3.4748e-01 insignificant 1.0000e+00 insignificant 0.0159325 0.0088157 0.00121580 60 0.029126 0.0351784 -0.00605226 3.9822e-01 2.9995e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.8573e-01 9.3517e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -4.6267e-03 5.5577e-01 insignificant 1.0000000 insignificant 0.017027 0.0156666 0.00073897 67 0.0302098 0.0318985 -0.00168874 7.6542e-01 9.0071e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.8901e-01 9.9977e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0062620 4.0966e-01 insignificant 1.0000e+00 insignificant 0.017027 0.0088157 0.00094951 60 0.0302098 0.0351784 -0.00496863 7.4759e-01 9.9405e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.7965e-01 9.9978e-01 insignificant 1.0000e+00 1.00000000 insignificant 7.7244e-03 3.8241e-01 insignificant 1.0000000 insignificant 0.0156666 0.0088157 2.2703e-03 59 0.0318985 0.0351784 -0.0032799 9.7282e-01 9.8878e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9998e-01 9.9890e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00146240 8.5340e-01 insignificant 1.0000e+00 insignificant chr9 126069117 126070117 34527 NEK6 ENSG00000119408 0.7691358 95 9 0.893658 211 9 0.7278694 239 9 0.866402 36 3 0.966193 145 9 0.674823 123 8 0.899669 207 9 0.903243 197 7 0.9180046 191 9 0.9333480 191 9 0.817750 253 9 0.8302129 147 6 0.8932536 256 9 NA 0 0 0.9148459 189 9 0.6537037 65 6 0.8326758 139 9 0.3589947 65 6 0.8889182 213 9 0.953171 104 8 0.932275 83 9 0.5740741 25 0 0.9130952 115 9 0.8543170 80 6 1.000000 4 0 0.7698079 206 6 0.812819 92 9 0.934342 113 9 0.6691251 196 9 0.9029461 265 9 0.8579841 229 9 0.9491217 206 9 0.0140752 333 9 0.0158809 230 9 0.0000000 195 3 0.000000 31 3 0.207379 92 9 0.0015221 424 9 0.5819717 109 9 0.7297960 146 9 0.6928571 46 6 0.6864198 49 3 0.5111111 33 3 0.7807910 0.8877443 0.7367286 0.8417070 0.9731769 0.669472 0.8943691 0.9087592 0.9239225 0.9294066 0.8244388 0.8147857 0.8880841 NA 0.9105588 0.6444915 0.8258686 0.3569411 0.8868004 0.9498756 0.9232715 0.5593220 0.9146540 0.8548729 NA 0.7851357 0.83162867 0.935028 0.6631669 0.9069650 0.8573075 0.9494420 0.0122389 0.0161911 0.02423657 0.00987766 0.216198 0.0024379 0.5907029 0.7513949 0.6937046 0.6635593 0.5203390 0 0.8594260 0.887237 -2.9689e-02 9 0.856865 0.877745 -0.02087946 9.3933e-01 9.8365e-02 insignificant 1.000000 1.000000 insignificant 0.77442472 0.29176380 insignificant 1.00000 1.00000 insignificant -0.02139377 0.6644250 insignificant 1.00000 insignificant 0.8594260 0.0229885 0.83640486 9 0.856865 0.0235678 0.8332975 1.7024e-90 1.0000e+00 hypermethylated 2.4319e-88 1.0000e+00 hypermethylated 1.1740e-20 1.0000e+00 hypermethylated 1.4675e-18 1.0000e+00 hypermethylated 0.7862889 3.0450e-11 hypermethylated 3.3833e-09 hypermethylated 0.8594260 0.6997389 0.16822129 9 0.856865 0.6678595 0.18900579 1.4150e-13 9.9997e-01 weaklyHypermeth 2.8301e-11 1.0000e+00 weaklyHypermeth 1.9260e-06 1.0000e+00 weaklyHypermeth 2.1400e-04 1.0000e+00 weaklyHypermeth 1.8567e-01 5.2477e-03 weaklyHypermeth 0.1499329 insignificant 0.887237 0.0229885 0.86404216 9 0.8777448 0.0235678 0.85417697 1.1235e-75 1.0000e+00 hypermethylated 1.6050e-73 1.0000e+00 hypermethylated 2.9637e-17 1.0000e+00 hypermethylated 3.7046e-15 1.0000e+00 hypermethylated 0.8076827 1.0195e-10 hypermethylated 3.3983e-08 hypermethylated 0.887237 0.6997389 0.19018513 9 0.8777448 0.6678595 0.20988525 3.2808e-13 9.9999e-01 weaklyHypermeth 6.5616e-11 1.0000e+00 weaklyHypermeth 5.7137e-07 1.0000e+00 weaklyHypermeth 9.5228e-05 1.00000000 weaklyHypermeth 2.0706e-01 3.1470e-03 weaklyHypermeth 0.1748317 insignificant 0.0229885 0.6997389 -6.7446e-01 9 0.0235678 0.6678595 -0.6442917 1.0000e+00 1.7520e-29 hypomethylated 1.0000e+00 2.1900e-27 hypomethylated 1.0000e+00 8.5670e-12 hypomethylated 1.0000e+00 9.5188e-10 hypomethylated -0.60062155 2.4583e-06 hypomethylated 3.1533e-04 hypomethylated chr9 126080517 126081517 34528 ENSG00000204122 0.7191176 45 3 0.556015 157 5 0.6933150 95 5 0.785897 102 9 0.752185 77 6 0.677747 132 6 0.754220 178 10 0.737529 92 6 0.6768707 68 5 0.7142857 19 0 0.734435 173 7 0.6868687 42 3 0.5000000 14 0 0.708333 18 0 0.7300000 20 1 0.7500000 32 1 0.7747466 243 4 0.6179487 28 1 0.6900000 48 4 0.716667 61 5 0.746465 58 4 0.7962963 30 1 0.8335583 94 6 0.8500000 44 2 0.779068 219 9 0.6993646 166 9 0.592810 52 4 0.658333 32 2 0.7703704 49 4 0.7457427 132 6 0.8627962 184 6 0.7231183 129 6 0.7570866 176 9 0.6296703 104 9 0.7476190 144 9 0.781552 214 10 0.544294 165 6 0.8196481 185 6 0.7375562 133 9 0.6995671 96 5 0.7040936 97 6 0.9292929 32 3 0.7952436 135 9 0.2977941 0.4756308 0.3791209 0.3041667 0.2571023 0.447139 0.6533267 0.3969697 0.4761905 0.5000000 0.4073296 0.4513889 0.3750000 0.8125000 0.6625000 0.4375000 0.9769553 0.5083333 0.3500000 0.2916667 0.6388889 0.5416667 0.4590643 0.6250000 0.5134923 0.3305952 0.23202614 0.395833 0.5611111 0.4903036 0.6782670 0.5302419 0.6456928 0.4750000 0.36904762 0.47619048 0.375016 0.6290323 0.2638158 0.6244589 0.5380117 0.8939394 0.4595405 0 0.7018293 0.670034 6.0745e-02 5 0.776242 0.683261 0.09298088 1.6858e-01 9.7256e-01 insignificant 1.000000 1.000000 insignificant 0.98920072 0.34205027 insignificant 1.00000 1.00000 insignificant -0.05601779 0.0568076 lowCoverage 1.00000 lowCoverage 0.7018293 0.6524823 0.05690329 5 0.776242 0.6892004 0.0870415 3.9013e-01 4.3778e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.7084e-01 7.3594e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0145025 7.5996e-01 lowCoverage 1.0000e+00 lowCoverage 0.7022575 0.6389452 0.04622090 5 0.794658 0.7789465 0.01571149 4.4656e-01 7.8984e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.2546e-01 5.7141e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -7.4342e-02 1.6103e-01 lowCoverage 1.0000000 lowCoverage 0.670034 0.6524823 -0.00439264 6 0.6832610 0.6892004 -0.00593940 9.9526e-01 2.9474e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.4175e-01 9.5626e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0415153 4.1626e-01 lowCoverage 1.0000e+00 lowCoverage 0.671164 0.6382114 -0.01671194 6 0.7808697 0.7631570 0.01771273 6.4427e-01 6.4070e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.4270e-01 9.7186e-01 insignificant 1.0000e+00 1.00000000 insignificant -1.8324e-02 7.1703e-01 lowCoverage 1.0000000 lowCoverage 0.6537678 0.6382114 -1.4739e-02 6 0.7519433 0.7631570 -0.0112137 2.1597e-01 9.5866e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.7172e-01 9.1644e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.05983903 3.4729e-01 insignificant 1.0000e+00 insignificant chr9 126100217 126101217 34531 NEK6 ENSG00000119408 0.8345238 131 6 0.817593 373 7 0.8685880 166 7 0.800392 181 7 0.868543 121 6 0.912667 397 7 0.868758 154 7 0.815130 127 7 0.8660464 86 7 0.9260697 90 5 0.903138 354 7 0.8952381 36 6 0.8730159 93 6 0.968939 92 5 0.9153439 111 6 0.9136364 46 5 0.6111111 9 0 0.7919624 139 6 0.8362651 289 6 0.793701 298 7 0.922285 159 6 0.8424908 54 4 0.9250825 213 6 0.8233511 131 7 0.981481 87 4 0.7758635 441 7 0.746028 140 6 0.882143 79 6 0.7814316 321 6 0.9040137 412 7 0.8144881 510 7 0.9514469 368 7 0.8892310 254 7 0.9394792 157 7 0.8321596 474 6 0.410714 57 1 0.850587 274 7 0.9330766 337 7 0.9266121 347 7 0.9541135 254 7 0.8648543 129 7 0.8648635 91 6 0.9776618 221 7 0.8586043 0.8793926 0.9151692 0.8992220 0.8364469 0.915402 0.8531579 0.8130608 0.8687022 0.8970478 0.8962159 0.8883408 0.8325859 0.9490420 0.9064732 0.8574806 0.7359048 0.8739213 0.8295257 0.8805676 0.9108803 0.8479883 0.9157207 0.8234572 0.9648451 0.8976432 0.87804102 0.929671 0.9120840 0.8989803 0.9369574 0.9593117 0.8871796 0.9401356 0.79293248 0.69743578 0.879987 0.9513546 0.9636675 0.9353179 0.8481469 0.8663192 0.9770837 4 0.8839259 0.914207 -3.1593e-02 7 0.813996 0.800340 0.01365584 9.8907e-01 1.5278e-02 weaklyHypometh 1.000000 0.565848 insignificant 0.75735100 0.10634679 insignificant 1.00000 1.00000 insignificant -0.00847571 0.7618420 insignificant 1.00000 insignificant 0.8835866 0.9336768 -0.04347963 7 0.767495 0.8684269 -0.1009320 9.9901e-01 2.4073e-03 weaklyHypometh 1.0000e+00 1.7820e-01 insignificant 9.5984e-01 1.5649e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 0.0448251 6.1187e-01 insignificant 1.0000e+00 insignificant 0.8841593 0.9472169 -0.05560112 7 0.892495 0.9429419 -0.05044701 1.0000e+00 1.4733e-03 weaklyHypometh 1.0000e+00 6.1388e-02 weaklyHypometh 9.9718e-01 1.1432e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -6.3588e-02 5.2930e-02 insignificant 0.7065370 insignificant 0.914747 0.9342360 -0.01568548 7 0.9052477 0.9210593 -0.01581157 7.4789e-01 1.2560e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.6866e-01 3.1856e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 0.0533008 5.5246e-01 insignificant 1.0000e+00 insignificant 0.914492 0.9472169 -0.02986923 7 0.8754251 0.9429419 -0.06751681 9.6674e-01 1.5794e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8494e-01 9.3171e-02 insignificant 1.0000e+00 1.00000000 insignificant -5.5112e-02 1.1037e-01 insignificant 1.0000000 insignificant 0.9342360 0.9471662 -6.6874e-03 7 0.9210593 0.9347907 -0.0137314 6.4195e-01 6.1370e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.9566e-01 5.9697e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.10841304 2.4992e-01 insignificant 1.0000e+00 insignificant chr9 126546917 126547917 34546 MIR181B2 ENSG00000207737 0.6081488 181 6 0.658576 237 6 0.6354929 140 7 0.757732 143 6 0.606599 124 7 0.652152 339 6 0.615349 133 6 0.555741 148 6 0.5909190 144 6 0.6562979 120 6 0.695387 225 7 0.4997001 87 5 0.6365391 149 6 0.687500 30 3 0.6100563 131 6 0.5462823 86 6 0.7084300 241 5 0.6448031 140 6 0.6834635 124 5 0.722563 302 6 0.705474 54 5 0.7665808 110 6 0.6260364 129 6 0.7509657 78 6 0.818549 65 4 0.6338116 184 7 0.768254 86 6 0.685714 39 4 0.6205296 121 6 0.7353981 196 6 0.7098941 262 7 0.6901601 367 6 0.6189148 170 6 0.4889240 102 6 0.6570812 149 7 0.582968 58 4 0.717121 90 6 0.6172704 235 7 0.7605330 155 6 0.7305713 174 6 0.5941879 160 6 0.6879765 145 6 0.6864700 166 6 0.7250098 0.6530100 0.6341263 0.7960180 0.6928936 0.666269 0.6892966 0.6600994 0.7064193 0.7043941 0.7194495 0.5863627 0.6766122 0.8085504 0.7141415 0.6565355 0.7426019 0.7238613 0.6821051 0.7030162 0.7077531 0.7190700 0.7486907 0.7950036 0.8071995 0.6848999 0.72148746 0.801060 0.6457581 0.6931077 0.6947342 0.7244840 0.5761986 0.5701875 0.63743083 0.60702219 0.663133 0.6301244 0.7875508 0.7545756 0.7170970 0.6999400 0.6945697 5 0.6966781 0.726198 -1.5362e-02 6 0.643426 0.696911 -0.05348581 9.5415e-01 1.4055e-01 insignificant 1.000000 1.000000 insignificant 0.96447548 0.03135728 weaklyHypometh 1.00000 1.00000 insignificant -0.07069397 0.0049542 weaklyHypometh 0.79025 insignificant 0.6966781 0.6293532 0.06953445 6 0.643426 0.6218807 0.0215450 3.3886e-05 8.6432e-01 weaklyHypermeth 2.8717e-04 1.0000e+00 weaklyHypermeth 3.6188e-04 6.3389e-01 weaklyHypermeth 4.0209e-03 1.0000e+00 weaklyHypermeth 0.0248735 4.8990e-01 insignificant 1.0000e+00 insignificant 0.6966781 0.7362500 -0.03923452 6 0.643426 0.7038524 -0.06042676 9.8873e-01 2.6978e-02 weaklyHypometh 1.0000e+00 5.1881e-01 insignificant 9.9469e-01 2.1754e-02 weaklyHypometh 1.0000e+00 5.8796e-01 insignificant -5.3361e-02 1.3902e-01 insignificant 1.0000000 insignificant 0.726198 0.6293532 0.08479572 6 0.6969115 0.6218807 0.07503079 1.8787e-05 9.9921e-01 weaklyHypermeth 1.7236e-04 1.0000e+00 weaklyHypermeth 1.3157e-04 9.9842e-01 weaklyHypermeth 1.5852e-03 1.0000e+00 weaklyHypermeth 0.0955675 2.7598e-02 weaklyHypermeth 2.2437e-01 insignificant 0.726198 0.7362500 -0.02267448 6 0.6969115 0.7038524 -0.00694094 8.7274e-01 1.6013e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.3848e-01 4.7120e-01 insignificant 1.0000e+00 1.00000000 insignificant 1.7333e-02 6.1830e-01 insignificant 1.0000000 insignificant 0.6293532 0.7362500 -1.0899e-01 6 0.6218807 0.7038524 -0.0819717 9.9401e-01 3.8102e-06 weaklyHypometh 1.0000e+00 5.2920e-05 weaklyHypometh 9.1599e-01 9.6314e-05 weaklyHypometh 1.0000e+00 1.7836e-03 weaklyHypometh -0.07823463 9.5156e-02 insignificant 6.2603e-01 insignificant chr9 126614217 126615217 34553 OLFML2A ENSG00000185585 0.8268142 109 7 0.677728 149 8 0.6545895 181 8 0.690476 29 3 0.665235 115 8 0.714959 112 8 0.681972 205 8 0.697676 126 8 0.6475402 163 8 0.7100427 112 8 0.802590 243 8 0.5671142 142 8 0.5256911 219 8 NA 0 0 0.5612511 160 8 0.6815771 208 7 0.6270833 220 8 0.6198232 55 6 0.6476261 189 8 0.726409 103 8 0.772382 72 8 0.5714286 15 0 0.7588930 161 8 0.7864583 88 7 0.666667 17 0 0.7527152 162 8 0.775427 97 7 0.622183 63 6 0.5768658 109 8 0.7331779 246 8 0.7294245 237 8 0.7585092 226 8 0.4208211 192 8 0.2170994 209 8 0.4878779 285 8 0.583333 36 3 0.487500 78 8 0.4488557 219 8 0.5596830 77 7 0.6538997 115 8 0.6875000 20 2 0.6204545 45 5 0.9353741 18 2 0.8015226 0.6234917 0.6212443 0.5797291 0.5474927 0.640812 0.5737788 0.6382635 0.5599102 0.6312240 0.7408347 0.5202519 0.4487901 NA 0.4680985 0.5505176 0.5403670 0.6573997 0.5468077 0.6626218 0.7567512 0.4587447 0.7198851 0.7121560 0.5046163 0.7052862 0.70944092 0.493586 0.5920960 0.6753803 0.7011143 0.6833969 0.3006538 0.1725011 0.36327075 0.42201835 0.358191 0.3769523 0.5399792 0.5474855 0.7133028 0.6000000 0.8714504 1 0.7007042 0.732753 -6.6291e-02 8 0.668607 0.730181 -0.06157314 9.9809e-01 2.2257e-05 weaklyHypometh 1.000000 0.011129 weaklyHypometh 0.99530685 0.00061543 weaklyHypometh 1.00000 0.20514 insignificant -0.03887778 0.1842776 insignificant 1.00000 insignificant 0.7007042 0.4082434 0.25218891 8 0.668607 0.3986503 0.2699571 9.0913e-18 1.0000e+00 hypermethylated 1.6530e-16 1.0000e+00 hypermethylated 1.8714e-08 9.9993e-01 hypermethylated 3.9817e-07 1.0000e+00 hypermethylated 0.2288853 4.5761e-03 weaklyHypermeth 5.1417e-02 weaklyHypermeth 0.7007042 0.6000000 -0.00254867 5 0.668607 0.6606154 0.00799198 2.5200e-01 1.2629e-03 weaklyHypometh 1.0000e+00 5.9322e-02 weaklyHypometh 9.1703e-01 3.2344e-04 weaklyHypometh 1.0000e+00 2.4880e-02 weaklyHypometh -2.1582e-02 7.6074e-01 lowCoverage 1.0000000 lowCoverage 0.732753 0.4082434 0.33323941 8 0.7301806 0.3986503 0.33153028 6.8354e-23 1.0000e+00 hypermethylated 1.7527e-21 1.0000e+00 hypermethylated 1.1621e-07 1.0000e+00 hypermethylated 2.4211e-06 1.0000e+00 hypermethylated 0.2677631 1.7219e-03 weaklyHypermeth 2.4599e-02 weaklyHypermeth 0.732753 0.6000000 0.07455326 5 0.7301806 0.6606154 0.06956512 5.2344e-02 5.6321e-01 insignificant 6.4623e-01 1.0000e+00 insignificant 8.1606e-01 2.3976e-01 insignificant 1.0000e+00 1.00000000 insignificant 1.7295e-02 8.1046e-01 lowCoverage 1.0000000 lowCoverage 0.4082434 0.6000000 -2.9942e-01 5 0.3986503 0.6606154 -0.2619652 9.9999e-01 9.4604e-09 hypomethylated 1.0000e+00 1.8550e-07 hypomethylated 9.9997e-01 2.9127e-07 hypomethylated 1.0000e+00 1.2462e-05 hypomethylated -0.25046770 1.5541e-02 lowCoverage 1.8501e-01 lowCoverage chr9 126636717 126637717 34556 OLFML2A ENSG00000185585 0.8597420 109 5 0.691123 291 5 0.7270580 119 5 0.843838 111 6 0.863689 116 5 0.916918 174 5 0.826947 96 5 0.859565 214 5 0.7483516 48 5 0.8099673 107 5 0.909181 256 5 0.8392857 36 5 0.7992162 125 5 0.769076 93 5 0.8108144 119 5 0.9777778 35 5 0.0000000 2 0 0.6275614 140 5 0.8350460 330 5 0.892059 239 5 0.779983 72 5 0.9304762 70 5 0.7149123 93 5 0.9509982 118 5 0.870513 56 5 0.8762474 230 5 0.767426 158 5 0.722092 51 4 0.8372777 250 5 0.6972033 333 5 0.8476341 412 5 0.9061401 163 5 0.5863808 252 5 0.4596491 198 5 0.5284585 181 5 0.500000 8 0 0.518391 208 5 0.5166180 313 5 0.7995098 141 5 0.8689468 142 5 0.9181287 68 5 0.8750329 61 5 0.8492063 115 6 0.8390529 0.6682770 0.6950308 0.8424769 0.8541679 0.891110 0.8079462 0.8553749 0.7197802 0.7943166 0.9001015 0.8300333 0.7785540 0.7565986 0.8154560 0.9717904 0.5319519 0.6153536 0.8239656 0.8667948 0.7815251 0.9228473 0.8376966 0.9402970 0.8660710 0.8627488 0.75932968 0.670134 0.8388749 0.8170597 0.8333950 0.9064794 0.5271870 0.4031452 0.44230887 0.42227979 0.468909 0.5717824 0.7441989 0.8412774 0.9063721 0.8432673 0.8214594 5 0.8025362 0.832004 -3.2246e-02 5 0.832067 0.708043 0.12402368 3.4541e-02 4.3283e-02 weaklyHypometh 1.000000 0.873497 insignificant 0.76319641 0.06111828 insignificant 1.00000 1.00000 insignificant -0.04471434 0.3920184 lowCoverage 1.00000 lowCoverage 0.8025362 0.4508621 0.32593873 5 0.832067 0.4567025 0.3753640 1.3892e-16 9.9998e-01 hypermethylated 2.3154e-15 1.0000e+00 hypermethylated 8.2670e-06 9.8813e-01 hypermethylated 1.2339e-04 1.0000e+00 hypermethylated 0.2621112 1.4727e-05 lowCoverage 3.9802e-04 lowCoverage 0.8025362 0.8178368 -0.02132425 5 0.832067 0.8478553 -0.01578878 7.9571e-01 2.6360e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.6982e-01 3.5100e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -8.1804e-02 1.0755e-01 lowCoverage 1.0000000 lowCoverage 0.832004 0.4508621 0.36523770 5 0.7080429 0.4567025 0.25134033 3.0727e-13 1.0000e+00 hypermethylated 5.2977e-12 1.0000e+00 hypermethylated 3.0251e-05 9.9973e-01 hypermethylated 4.3216e-04 1.0000e+00 hypermethylated 0.3068255 2.2554e-08 lowCoverage 1.7349e-06 lowCoverage 0.832004 0.8178368 0.00993329 5 0.7080429 0.8478553 -0.13981246 3.5502e-01 4.6670e-04 inconclusive 1.0000e+00 5.6028e-02 inconclusive 5.0786e-01 3.5747e-01 insignificant 1.0000e+00 1.00000000 insignificant -3.7090e-02 2.6084e-01 lowCoverage 1.0000000 lowCoverage 0.4508621 0.8178368 -4.0598e-01 5 0.4567025 0.8478553 -0.3911528 9.9966e-01 3.3123e-11 hypomethylated 1.0000e+00 8.0787e-10 hypomethylated 9.9897e-01 7.0445e-04 hypomethylated 1.0000e+00 1.0360e-02 hypomethylated -0.34391527 5.2125e-07 lowCoverage 1.0425e-04 lowCoverage chr9 127229517 127230517 34574 ENSG00000218647 0.9785714 52 5 0.793680 165 5 0.9185185 99 5 0.963636 33 1 0.810196 80 2 0.706119 86 5 0.713222 89 2 0.914352 173 5 0.7710145 75 5 0.6667458 86 5 0.747261 292 6 0.4215385 54 2 0.7875310 179 6 0.970833 61 4 0.6424452 111 5 0.4208075 56 2 0.5771242 54 3 0.9193767 80 5 0.7809417 324 5 0.900794 83 5 0.820513 91 5 0.9148551 59 4 0.8725000 51 5 0.7208791 41 5 0.943627 34 4 0.9112125 243 5 0.919373 137 5 1.000000 33 2 0.7712965 227 5 0.9387354 306 5 0.9531979 392 5 0.8919481 103 5 0.9214286 92 5 0.7107671 124 5 1.0000000 39 2 1.000000 3 0 0.924663 77 5 0.9038234 228 5 0.9750000 16 1 0.9833333 82 5 1.0000000 24 1 1.0000000 9 1 0.9333333 38 4 0.9001957 0.7333867 0.7643328 0.8306351 0.9214504 0.846833 0.8862556 0.9035608 0.9880881 0.9685523 0.8585145 0.8457323 0.9392143 0.8296692 0.8770040 0.8282141 0.9528337 0.9091213 0.9007833 0.9112851 1.0000000 0.8336952 0.8082192 0.8566913 0.9409018 0.9058871 0.78885845 1.000000 0.8495258 0.9541882 0.9294205 0.8060399 0.9285714 0.9159132 1.00000000 1.00000000 0.993773 0.9258693 0.8835616 0.9942922 1.0000000 0.9985731 1.0000000 1 0.8758961 0.911474 -2.3261e-02 5 0.648162 0.878566 -0.23040417 9.8377e-01 3.7369e-04 weaklyHypometh 1.000000 0.053384 weaklyHypometh 0.96807730 0.06493567 insignificant 1.00000 1.00000 insignificant -0.11794274 0.0114871 lowCoverage 1.00000 lowCoverage 0.8765709 0.9200710 -0.03338277 5 0.669328 0.7662674 -0.0969393 8.8018e-01 1.1345e-02 weaklyHypometh 1.0000e+00 5.6723e-01 insignificant 9.8806e-01 1.9351e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.1398784 2.8806e-02 lowCoverage 2.4206e-01 lowCoverage 0.8921389 0.9763314 -0.08533394 1 0.908488 0.9619281 -0.05344021 8.5068e-01 1.0144e-04 lowCoverage 1.0000e+00 8.0883e-03 lowCoverage 9.9960e-01 3.6797e-04 lowCoverage 1.0000e+00 2.5916e-02 lowCoverage -2.0810e-01 2.3183e-05 lowCoverage 0.0038638 lowCoverage 0.911851 0.9200710 -0.01408526 5 0.8969329 0.7662674 0.13066545 7.8318e-01 1.7925e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.7385e-01 2.2971e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0219356 6.6715e-01 lowCoverage 1.0000e+00 lowCoverage 0.912661 0.9763314 -0.06583920 1 0.9223727 0.9619281 -0.03955544 7.5164e-01 5.8585e-03 lowCoverage 1.0000e+00 3.0570e-01 lowCoverage 9.9797e-01 5.0779e-03 lowCoverage 1.0000e+00 0.42315692 lowCoverage -9.0155e-02 3.7312e-03 lowCoverage 0.1865583 lowCoverage 0.9245961 0.9763314 -3.9857e-02 1 0.9227744 0.9619281 -0.0391537 9.3513e-01 7.0095e-02 lowCoverage 1.0000e+00 4.3003e-01 lowCoverage 9.9585e-01 7.6787e-02 lowCoverage 1.0000e+00 5.4075e-01 lowCoverage -0.06821961 1.8219e-01 lowCoverage 1.0000e+00 lowCoverage chr9 127238217 127239217 34575 ENSG00000218647 0.6809169 349 6 0.896413 93 6 0.6271928 172 7 0.944552 191 6 0.699972 134 7 0.881355 373 6 0.737088 167 6 0.827448 175 6 0.6162418 94 6 0.6925919 146 6 0.815697 266 9 0.7151982 106 9 0.7492600 121 9 0.982517 73 6 0.7962418 170 6 0.7195238 122 9 0.5416667 19 3 0.9099634 516 6 0.6971869 235 9 0.896172 271 6 0.780000 84 5 0.9380005 125 6 0.7412923 217 6 0.7773268 66 5 0.955796 325 5 0.9497924 163 6 0.784395 166 5 0.425455 64 4 0.6923519 156 6 0.7899033 126 6 0.8467975 225 6 0.9219008 226 6 0.9246032 92 6 0.7002516 182 9 0.8888889 106 3 0.881720 141 5 0.616436 133 8 0.9141303 285 6 0.8981314 279 6 0.8746023 235 6 0.8944408 196 6 0.8175710 232 6 0.9292077 166 6 0.8607128 0.8830553 0.8291966 0.9331513 0.9043874 0.898328 0.9441371 0.9662880 0.8428451 0.9083889 0.9488902 0.9319877 0.8761443 0.9720965 0.9564014 0.8615686 NA 0.9084868 0.9529418 0.9654301 0.9325490 0.9167666 0.9299729 0.8039025 0.9289178 0.9226753 0.90244281 0.887965 0.9317414 0.9046146 0.9315544 0.9386832 0.9482726 0.8402240 0.99005031 0.92574320 0.866895 0.8306372 0.9132342 0.9040960 0.8874817 0.9115987 0.9325076 5 0.8758239 0.905719 -1.4446e-02 6 0.777855 0.692044 0.08581086 4.4002e-01 6.6964e-01 insignificant 1.000000 1.000000 insignificant 0.56132381 0.85231309 insignificant 1.00000 1.00000 insignificant -0.02889105 0.5723542 insignificant 1.00000 insignificant 0.8757584 0.8708645 0.01581925 6 0.740831 0.6994252 0.0414055 2.8645e-01 8.4792e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.2533e-01 2.3217e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0496451 4.2791e-01 insignificant 1.0000e+00 insignificant 0.8836195 0.8935018 -0.00385405 6 0.734587 0.8635698 -0.12898320 5.7385e-01 4.5902e-02 weaklyHypometh 1.0000e+00 7.1507e-01 insignificant 3.7370e-01 4.1796e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -1.1143e-01 2.7136e-03 weaklyHypometh 0.0935735 weaklyHypometh 0.907121 0.8710021 0.03206261 6 0.7837397 0.7225463 0.06119340 1.2513e-01 9.0881e-01 insignificant 6.4837e-01 1.0000e+00 insignificant 7.2289e-01 6.6157e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0207541 7.6556e-01 insignificant 1.0000e+00 insignificant 0.909990 0.8935018 0.01437144 6 0.7894759 0.8635698 -0.07409396 4.5158e-01 4.6511e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.0841e-01 8.1537e-01 insignificant 1.0000e+00 1.00000000 insignificant -8.2540e-02 9.6932e-02 insignificant 1.0000000 insignificant 0.8783931 0.8935018 -1.6148e-02 6 0.7103447 0.8635698 -0.1532252 5.3388e-01 2.9104e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.8082e-01 9.6421e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.06178561 3.1174e-01 insignificant 1.0000e+00 insignificant chr9 127491117 127492117 34587 MAPKAP1 ENSG00000119487 0.7837577 324 10 0.663862 150 10 0.6611111 113 10 0.756714 211 10 0.600207 104 10 0.839111 322 10 0.665741 110 6 0.828654 159 8 0.5233736 77 7 0.8387446 125 10 0.737851 226 10 0.8406593 99 6 0.9371739 126 9 0.768687 51 5 0.7024702 125 10 0.5839744 62 6 0.5919814 74 6 0.8788083 207 10 0.7435084 139 10 0.823537 282 10 0.705769 56 4 0.7469231 71 4 0.7571496 165 10 0.7900000 50 7 0.933333 65 6 0.8058924 154 10 0.709634 99 8 0.817576 42 3 0.7838045 123 10 0.7879299 191 10 0.7673369 180 10 0.7066288 384 10 0.6113562 146 10 0.7614419 147 10 0.8042262 179 10 0.837480 71 6 0.689710 71 4 0.6319011 178 10 0.8222797 247 10 0.8258571 266 10 0.8700734 232 10 0.8928312 256 10 0.8406984 288 10 0.8197436 0.6999682 0.7258805 0.8412316 0.6738422 0.864737 0.7308989 0.8749485 0.6440948 0.8308596 0.8436315 0.8325844 0.9298347 0.8006583 0.7542451 0.6852249 0.6496951 0.9089789 0.8234336 0.8485930 0.7931920 0.7823146 0.7780455 0.8549107 0.9449405 0.8268991 0.75885953 0.827713 0.7666372 0.8279304 0.8009214 0.8386185 0.6748454 0.7780584 0.82605495 0.81316251 0.868320 0.7559399 0.8570520 0.8585075 0.8760611 0.8904502 0.8708427 3 0.7919637 0.809131 -1.1539e-02 10 0.747202 0.761859 -0.01465692 7.4912e-01 2.2450e-01 insignificant 1.000000 1.000000 insignificant 0.99030385 0.05840530 insignificant 1.00000 1.00000 insignificant -0.03750169 0.2336667 insignificant 1.00000 insignificant 0.7917613 0.7759494 0.02466478 10 0.724221 0.6818966 0.0423241 1.1567e-01 9.4166e-01 insignificant 5.9014e-01 1.0000e+00 insignificant 4.8781e-01 6.8467e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0158106 7.3492e-01 insignificant 1.0000e+00 insignificant 0.7917613 0.8540373 -0.06074891 10 0.724221 0.8524051 -0.12818446 9.9991e-01 2.8588e-03 weaklyHypometh 1.0000e+00 9.5790e-02 weaklyHypometh 1.0000e+00 1.2024e-04 weaklyHypometh 1.0000e+00 1.3326e-02 weaklyHypometh -1.1185e-01 6.8212e-04 weaklyHypometh 0.0359012 weaklyHypometh 0.809131 0.7749684 0.03810197 10 0.7618592 0.6250719 0.13678731 5.7996e-02 9.9940e-01 insignificant 3.2766e-01 1.0000e+00 insignificant 1.5279e-01 9.9832e-01 insignificant 8.9877e-01 1.0000e+00 insignificant 0.0533123 2.4275e-01 insignificant 1.0000e+00 insignificant 0.809131 0.8541505 -0.04779408 10 0.7618592 0.8647047 -0.10284551 9.9977e-01 2.8007e-02 weaklyHypometh 1.0000e+00 8.1498e-01 insignificant 9.9979e-01 8.4524e-02 insignificant 1.0000e+00 1.00000000 insignificant -7.4350e-02 5.2202e-03 weaklyHypometh 0.2474446 insignificant 0.7749684 0.8541505 -8.5811e-02 10 0.6250719 0.8647047 -0.2396328 1.0000e+00 9.9776e-04 weaklyHypometh 1.0000e+00 9.5025e-03 weaklyHypometh 9.9999e-01 4.8174e-03 weaklyHypometh 1.0000e+00 5.3527e-02 weaklyHypometh -0.12766213 1.8270e-02 weaklyHypometh 2.0944e-01 insignificant chr9 129310517 129311517 34610 ENSG00000200788 0.9397639 131 7 0.780303 30 1 0.7896104 65 7 0.775755 113 7 0.928571 24 1 0.851615 110 6 0.824248 50 3 0.864198 110 7 0.7708333 28 1 0.9309524 51 7 0.929426 144 7 0.6309524 26 1 0.7986607 55 7 0.802083 36 4 0.7410714 44 5 0.7500000 8 0 NA 0 0 0.9041883 143 6 0.9693878 113 7 0.971429 72 6 1.000000 35 3 0.9099567 76 7 0.8619048 50 5 0.9791667 27 3 0.962119 373 7 0.9574830 60 5 0.879252 41 6 1.000000 21 1 0.7751230 78 7 0.9582774 88 7 0.9100529 109 7 0.8894984 119 7 0.8650794 79 7 0.8557842 166 7 0.6093750 55 1 0.895929 163 7 0.680412 65 7 0.9657238 166 7 0.9280538 105 7 0.9287068 115 7 0.9078158 81 7 0.9554786 208 7 0.9540460 123 7 0.9428761 0.9020508 0.8172635 0.9085637 0.9444444 0.852377 0.8473551 0.9764310 0.8998316 0.9181818 0.9193202 0.7062290 0.8975108 0.8989899 0.8391053 0.9374619 NA 0.9124556 0.9751082 0.9777778 1.0000000 0.8983777 0.8631313 0.9505499 0.9659838 0.9597162 0.87433862 1.000000 0.8678451 0.9640079 0.9093481 0.8971771 0.8277217 0.8117314 0.70786369 0.89689417 0.860952 0.9613664 0.9325501 0.9229927 0.9048870 0.9583462 0.9512609 1 0.9060651 0.931291 -2.2367e-02 7 0.814216 0.835144 -0.02092807 9.9843e-01 3.1854e-01 insignificant 1.000000 1.000000 insignificant 0.99598291 0.37144506 insignificant 1.00000 1.00000 insignificant -0.08393524 0.0063220 lowCoverage 0.79025 lowCoverage 0.9060651 0.8472622 0.04465888 7 0.814216 0.6905482 0.1236678 1.6010e-01 7.6035e-01 insignificant 7.8479e-01 1.0000e+00 insignificant 4.2644e-01 7.0875e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0275837 6.5953e-01 lowCoverage 1.0000e+00 lowCoverage 0.9113264 0.9430380 -0.02894594 7 0.903992 0.9377270 -0.03373493 9.8308e-01 5.8759e-02 insignificant 1.0000e+00 8.1610e-01 insignificant 8.8145e-01 2.3572e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -9.5186e-02 4.2858e-04 lowCoverage 0.0264877 lowCoverage 0.931291 0.8472622 0.06817161 7 0.8351441 0.6905482 0.14459590 1.5278e-01 9.2402e-01 insignificant 7.6776e-01 1.0000e+00 insignificant 3.9723e-01 9.5514e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.1115189 1.0646e-01 insignificant 6.8682e-01 insignificant 0.932961 0.9430380 -0.00230680 7 0.9308996 0.9377270 -0.00682741 4.7523e-01 2.2614e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.5498e-01 4.8866e-01 insignificant 1.0000e+00 1.00000000 insignificant -1.1251e-02 6.0136e-01 insignificant 1.0000000 insignificant 0.8497110 0.9430380 -7.8967e-02 7 0.8878477 0.9377270 -0.0498793 6.0080e-01 1.1397e-01 insignificant 1.0000e+00 6.4302e-01 insignificant 8.2652e-01 4.4572e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.12276970 7.9679e-02 insignificant 5.6112e-01 insignificant chr9 129341517 129342517 34612 ENSG00000200788 0.9081628 209 6 0.783833 122 8 0.8178788 107 3 0.858427 253 6 0.933709 71 4 0.874198 292 6 0.610603 120 4 0.836230 143 6 0.8925926 137 3 0.8762657 102 4 0.854080 191 6 0.8393134 71 3 0.8234469 144 3 0.818116 58 4 0.8047957 141 3 0.7170115 74 3 0.7050287 65 3 0.6710562 223 5 0.8093741 119 5 0.757717 226 5 0.809809 75 5 0.8439201 112 5 0.8658419 179 6 0.7655615 85 3 0.810715 324 6 0.8396001 196 6 0.862136 114 4 0.791491 102 3 0.8337951 155 5 0.9101717 204 6 0.8981656 331 6 0.8850427 266 5 0.4905488 168 6 0.2219742 163 5 0.3000000 106 3 0.335606 146 6 0.423895 146 6 0.1107352 184 6 0.7626536 199 5 0.8211711 225 6 0.8569953 190 6 0.7145455 139 5 0.7703708 261 6 0.9099722 0.7723981 0.7278059 0.8147319 0.8847058 0.820030 0.7692885 0.7417456 0.8018899 0.7757224 0.7782435 0.7900765 0.6486309 0.7555357 0.7534481 0.6156538 0.7296260 0.5061088 0.6881133 0.7562635 0.7432569 0.6977822 0.8298526 0.6043619 0.6055794 0.7553152 0.65329763 0.699777 0.6592553 0.8033482 0.7749391 0.8674885 0.0453632 0.0421554 0.00939813 0.01270772 0.136775 0.0159563 0.6242434 0.6985448 0.7079465 0.5940874 0.7149563 3 0.7761506 0.794559 4.2736e-03 5 0.803569 0.868436 -0.06486763 9.0315e-01 3.3758e-02 inconclusive 1.000000 0.790123 insignificant 0.55807460 0.25481575 insignificant 1.00000 1.00000 insignificant -0.03342884 0.1447819 lowCoverage 1.00000 lowCoverage 0.7761506 0.1496150 0.66821733 5 0.803569 0.3582221 0.4453465 2.1684e-43 9.9740e-01 hypermethylated 1.2046e-41 1.0000e+00 hypermethylated 7.2430e-13 9.8754e-01 hypermethylated 2.8972e-11 1.0000e+00 hypermethylated 0.4957988 1.3664e-04 lowCoverage 2.8466e-03 lowCoverage 0.7761821 0.7228797 0.06582990 5 0.817456 0.7887330 0.02872350 1.8475e-02 5.7930e-01 weaklyHypermeth 2.9799e-01 1.0000e+00 insignificant 1.3763e-02 8.0726e-01 weaklyHypermeth 3.2769e-01 1.0000e+00 insignificant 2.4445e-02 4.4719e-01 lowCoverage 1.0000000 lowCoverage 0.795040 0.1513158 0.64987872 6 0.8947490 0.4365777 0.45817128 3.3914e-33 1.0000e+00 hypermethylated 1.4131e-31 1.0000e+00 hypermethylated 1.2404e-10 1.0000e+00 hypermethylated 4.2771e-09 1.0000e+00 hypermethylated 0.5292276 1.4623e-04 hypermethylated 3.1790e-03 hypermethylated 0.793201 0.7228797 0.05199129 6 0.8245816 0.7887330 0.03584859 6.1061e-02 8.3964e-01 insignificant 7.2949e-01 1.0000e+00 insignificant 7.5340e-02 8.8714e-01 insignificant 1.0000e+00 1.00000000 insignificant 5.7874e-02 8.0176e-02 insignificant 1.0000000 insignificant 0.1399776 0.7228797 -6.0007e-01 6 0.2368887 0.7887330 -0.5518443 1.0000e+00 2.7992e-22 hypomethylated 1.0000e+00 1.4733e-20 hypomethylated 1.0000e+00 1.0152e-08 hypomethylated 1.0000e+00 5.6401e-07 hypomethylated -0.47135405 1.3168e-04 hypomethylated 6.2702e-03 hypomethylated chr9 129401617 129402617 34620 FAM129B ENSG00000136830 0.7854475 336 8 0.685709 135 7 0.5531525 109 7 0.776727 276 5 0.739678 100 5 0.675757 427 6 0.664721 120 5 0.857143 101 5 0.6718750 41 5 0.9428571 26 4 0.896447 133 6 0.5125000 24 2 0.7638889 36 2 0.918651 39 2 0.7732426 48 5 0.6666667 16 1 1.0000000 4 0 0.7547269 637 7 0.7814927 155 4 0.735046 270 5 0.717460 36 5 0.8750000 11 0 0.7313841 172 7 0.9194805 71 6 0.624882 305 4 0.7126880 186 8 0.845238 43 4 0.722222 32 4 0.7515873 158 6 0.7113474 138 8 0.7331102 215 8 0.9228075 261 6 0.6947475 101 7 0.7290110 90 4 0.7873775 55 4 0.702439 126 3 0.687103 170 6 0.7441800 228 8 0.7939865 414 7 0.7788147 254 7 0.8095201 343 5 0.7194224 309 5 0.7771859 303 5 0.7900226 0.6045163 0.6465022 0.8065380 0.7825226 0.860007 0.7749663 0.8289474 0.8371711 0.9052632 0.8230994 0.7907895 0.8270991 0.8689693 0.8020050 0.6134126 NA 0.8384211 0.8603957 0.7568166 0.8588811 0.8450244 0.7553844 0.8600478 0.7828283 0.7523379 0.91008772 0.934211 0.7554825 0.7973069 0.8667037 0.8690303 0.6908453 0.7177126 0.70903338 0.76035224 0.759461 0.8050296 0.9070562 0.8363637 0.8851806 0.8422536 0.8540593 0 0.8608638 0.854333 -7.6402e-03 7 0.719105 0.699075 0.02003005 9.0652e-01 7.3770e-01 insignificant 1.000000 1.000000 insignificant 0.92748668 0.83111772 insignificant 1.00000 1.00000 insignificant -0.01448088 0.7118053 lowCoverage 1.00000 lowCoverage 0.8610561 0.8051948 0.05129263 7 0.767795 0.7415414 0.0262534 7.9271e-03 8.4160e-01 weaklyHypermeth 4.9544e-02 1.0000e+00 weaklyHypermeth 2.8791e-02 9.8685e-01 weaklyHypermeth 2.0276e-01 1.0000e+00 insignificant 0.0336434 2.9761e-01 lowCoverage 1.0000e+00 lowCoverage 0.8609643 0.9020333 -0.04158544 7 0.738769 0.7864520 -0.04768291 9.7336e-01 3.1656e-02 weaklyHypometh 1.0000e+00 5.6600e-01 insignificant 6.5105e-01 2.5933e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -1.7999e-02 5.7363e-01 lowCoverage 1.0000000 lowCoverage 0.855206 0.8051948 0.05456303 7 0.7803506 0.7415414 0.03880924 9.0305e-03 9.5240e-01 weaklyHypermeth 5.9805e-02 1.0000e+00 weaklyHypermeth 2.3303e-02 9.4846e-01 weaklyHypermeth 1.7262e-01 1.0000e+00 insignificant 0.0481243 1.4472e-01 insignificant 8.6605e-01 insignificant 0.855117 0.9020333 -0.03643534 7 0.7528944 0.7864520 -0.03355756 9.5504e-01 7.6914e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 5.1844e-01 6.2232e-01 insignificant 1.0000e+00 1.00000000 insignificant -3.5186e-03 9.1191e-01 insignificant 1.0000000 insignificant 0.8049415 0.9020333 -9.1435e-02 7 0.7092340 0.7864520 -0.0772180 9.9748e-01 2.6955e-03 weaklyHypometh 1.0000e+00 2.2462e-02 weaklyHypometh 9.9842e-01 6.5449e-03 weaklyHypometh 1.0000e+00 6.9627e-02 weaklyHypometh -0.05164289 4.1452e-02 weaklyHypometh 3.5640e-01 insignificant chr9 129478517 129479517 34623 STXBP1 ENSG00000136854 0.9017778 341 6 0.754464 309 6 0.7830970 187 6 0.963561 354 6 0.937729 88 5 0.926137 350 6 0.836936 142 6 0.896277 246 6 0.8778376 156 6 0.9627715 187 6 0.749438 283 6 0.8066288 74 5 0.8298870 235 6 0.935345 45 3 0.9374609 176 6 0.9074074 42 4 0.7532182 41 4 0.7351655 408 6 0.9417085 157 5 0.722841 323 6 0.912608 64 6 0.9262986 116 6 0.9576299 269 6 0.6981456 89 5 0.705455 105 6 0.9406122 358 6 0.773415 99 5 0.846154 70 5 0.8340840 193 6 0.9177408 318 6 0.6418972 425 6 0.9555674 378 6 0.9257983 230 6 0.7802349 155 5 0.5714286 90 1 0.933333 43 5 0.600444 106 6 0.7785212 298 6 0.9580249 313 5 0.9562951 378 5 0.9316793 355 5 0.6942597 358 5 0.9298230 392 6 0.9205121 0.8960809 0.7860179 0.9560479 0.9223069 0.928538 0.8316374 0.9274539 0.8323217 0.9411619 0.8816552 0.8495122 0.9641971 0.9359868 0.9236498 0.9048822 0.8425991 0.9234316 0.9307836 0.9637214 0.9027972 0.9419147 0.9354253 0.9162608 0.9496652 0.9486683 0.90476155 0.983392 0.9679595 0.9243992 0.9546377 0.9614822 0.9232239 0.8880967 0.84848485 0.91363636 0.920239 0.9057401 0.9480706 0.9488861 0.9235013 0.9513825 0.9420615 5 0.9114382 0.939614 -3.0533e-02 6 0.762924 0.609158 0.15376575 9.9102e-01 3.7642e-02 weaklyHypometh 1.000000 0.834363 insignificant 0.97610968 0.05709597 insignificant 1.00000 1.00000 insignificant 0.01551702 0.6831731 insignificant 1.00000 insignificant 0.9120773 0.9207383 -0.01134296 6 0.819915 0.6076247 0.2122907 3.1519e-01 3.5232e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.5571e-01 1.1664e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0930243 2.0767e-01 lowCoverage 1.0000e+00 lowCoverage 0.9131382 0.9537862 -0.03489331 5 0.887510 0.7895491 0.09796111 8.0454e-01 6.6478e-02 insignificant 1.0000e+00 8.6336e-01 insignificant 9.0812e-01 3.5690e-02 weaklyHypometh 1.0000e+00 7.4355e-01 insignificant -3.6032e-02 5.3101e-01 insignificant 1.0000000 insignificant 0.939992 0.9207383 0.01921533 6 0.6768423 0.6076247 0.06921764 1.6119e-01 8.2799e-01 insignificant 8.0594e-01 1.0000e+00 insignificant 6.7272e-01 8.3402e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0775073 3.0675e-01 lowCoverage 1.0000e+00 lowCoverage 0.943770 0.9537862 -0.00310956 5 0.8543528 0.7895491 0.06480369 5.1052e-01 7.1212e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.0876e-01 9.2610e-01 insignificant 1.0000e+00 1.00000000 insignificant -5.1549e-02 4.1519e-01 insignificant 1.0000000 insignificant 0.9237473 0.9537862 -2.0765e-02 5 0.7812317 0.7895491 -0.0083174 6.1807e-01 4.6312e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.4628e-01 9.2581e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.12905633 1.4434e-01 lowCoverage 8.6951e-01 lowCoverage chr9 129523717 129524717 34625 TTC16 ENSG00000167094 0.9170718 157 4 0.674258 263 7 0.6604688 185 8 0.905527 139 6 0.822288 156 7 0.783967 315 8 0.656049 260 7 0.794590 190 7 0.6490394 159 7 0.7880678 97 8 0.809588 409 8 0.7132881 94 7 0.7467845 146 7 0.770920 101 8 0.8273943 174 6 0.7125000 77 5 0.4444444 7 0 0.6637138 171 5 0.8032610 314 8 0.808670 250 8 0.872159 93 5 0.6597222 46 5 0.8375891 157 6 0.7622959 134 7 0.490741 25 2 0.7486462 397 8 0.775501 116 6 0.747975 95 5 0.7915250 272 8 0.8620925 362 8 0.7352815 566 8 0.7951144 275 8 0.8262825 252 8 0.5286836 175 8 0.8881857 458 8 0.000000 5 0 0.762539 260 8 0.3931211 345 8 0.8118504 183 6 0.8567335 219 6 0.6570419 106 6 0.6370499 183 5 0.7584121 192 6 0.8262061 0.6966263 0.6457910 0.7838854 0.6930599 0.815358 0.6998336 0.7148095 0.5291191 0.6526469 0.7181653 0.6140044 0.5198303 0.7468876 0.7142429 0.5258454 0.4382805 0.6917537 0.6712629 0.6614447 0.9215250 0.5534131 0.8115034 0.6529743 0.6629642 0.7558053 0.61435399 0.673442 0.6968433 0.7644151 0.6335510 0.7745163 0.6819408 0.3585381 0.65556779 0.08505871 0.752102 0.2960394 0.7370593 0.6947708 0.6003709 0.5823360 0.7328533 3 0.7251638 0.748227 -1.3198e-02 8 0.719364 0.756642 -0.03727748 8.8016e-01 1.4355e-01 insignificant 1.000000 1.000000 insignificant 0.60437948 0.25971219 insignificant 1.00000 1.00000 insignificant -0.00895909 0.8149736 insignificant 1.00000 insignificant 0.7251638 0.7070234 0.10593840 8 0.719364 0.6793211 0.0400431 1.7956e-03 4.5993e-01 weaklyHypermeth 1.2469e-02 1.0000e+00 weaklyHypermeth 7.1146e-02 8.8025e-01 insignificant 4.5901e-01 1.0000e+00 insignificant 0.1811259 2.4593e-01 insignificant 1.0000e+00 insignificant 0.7251638 0.7383918 -0.00041305 6 0.719364 0.7210620 -0.00169782 8.8213e-01 1.2094e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.8413e-01 4.9581e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.3769e-03 9.4694e-01 insignificant 1.0000000 insignificant 0.748227 0.7070234 0.10973763 8 0.7566417 0.6793211 0.07732061 1.0558e-02 5.9085e-01 weaklyHypermeth 6.9083e-02 1.0000e+00 weaklyHypermeth 1.0231e-01 6.2789e-01 insignificant 6.2770e-01 1.0000e+00 insignificant 0.1900850 2.2784e-01 insignificant 1.0000e+00 insignificant 0.748227 0.7383918 0.00550171 6 0.7566417 0.7210620 0.03557967 3.6586e-01 2.3787e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.9025e-01 2.1879e-01 insignificant 1.0000e+00 1.00000000 insignificant 1.2336e-02 8.1813e-01 insignificant 1.0000000 insignificant 0.7070234 0.7383918 -1.0644e-01 6 0.6793211 0.7210620 -0.0417409 8.7854e-01 1.1770e-01 insignificant 1.0000e+00 6.5390e-01 insignificant 9.6038e-01 7.9057e-02 insignificant 1.0000e+00 5.4901e-01 insignificant -0.17774898 2.6168e-01 insignificant 1.0000e+00 insignificant chr9 129544217 129545217 34626 TOR2A ENSG00000160404 0.0046296 89 4 0.010870 60 4 0.0250000 49 4 0.000000 114 2 0.000000 59 4 0.022222 42 4 0.014706 42 4 0.000000 57 4 0.0833333 26 3 0.0250000 34 3 0.010870 92 4 0.0000000 61 4 0.0000000 57 4 NA 0 0 0.0092593 62 4 0.0000000 63 4 0.0000000 28 2 0.0294365 259 2 0.0000000 54 6 0.104762 30 4 0.000000 11 1 0.2500000 3 0 0.0000000 35 4 0.0277778 27 4 NA 0 0 0.0000000 71 6 0.031250 23 3 0.000000 12 1 0.0000000 48 4 0.0104167 102 6 0.0000000 94 6 0.0175439 61 4 0.0228175 76 4 0.0312500 39 4 0.1000000 26 2 0.000000 90 2 0.141667 16 2 0.0416667 71 4 0.0036232 102 2 0.0000000 90 4 0.0043103 118 2 0.0085111 240 2 0.0682692 92 3 0.0000000 0.0271739 0.0000000 0.0000000 0.0000000 0.000000 0.0367647 0.0000000 0.0000000 0.0000000 0.0163043 0.0000000 0.0000000 NA 0.0231481 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 NA 0.0000000 0.0000000 NA 0.0000000 0.00000000 0.000000 0.0000000 0.0195312 0.0000000 0.0000000 0.0223214 0.0000000 0.62500000 0.00000000 0.104167 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0219436 0.015152 3.2475e-03 3 0.019023 0.014978 0.00404573 1.8966e-01 9.4434e-01 lowCoverage 1.000000 1.000000 lowCoverage 0.32750329 0.95559168 lowCoverage 1.00000 1.00000 lowCoverage -0.01273594 0.5931396 lowCoverage 1.00000 lowCoverage 0.0219436 0.0452962 -0.02294019 6 0.019023 0.0383869 -0.0193637 4.0277e-01 2.9440e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.5396e-01 4.1005e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0383341 1.4468e-01 lowCoverage 9.2160e-01 lowCoverage 0.0219608 0.0156986 0.01110186 2 0.022194 0.0466667 -0.02447289 1.4571e-01 3.2084e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 6.2221e-01 7.2225e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.5659e-04 9.4946e-01 lowCoverage 1.0000000 lowCoverage 0.014374 0.0408805 -0.03899072 3 0.0087369 0.0223924 -0.01365550 9.9978e-01 5.9793e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.9998e-01 7.4586e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0255982 4.2581e-01 lowCoverage 1.0000e+00 lowCoverage 0.014433 0.0155763 -0.00117869 0 0.0095311 0.0254545 -0.01592341 9.8815e-01 8.7419e-01 noCoverage 1.0000e+00 1.0000e+00 noCoverage 9.9999e-01 9.9084e-01 noCoverage 1.0000e+00 1.00000000 noCoverage 1.3693e-02 6.0258e-01 lowCoverage 1.0000000 lowCoverage 0.0410095 0.0155763 2.0628e-05 2 0.0244280 0.0254545 -0.0010265 9.9476e-01 7.5887e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.8049e-01 9.5645e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.03929069 1.6069e-01 lowCoverage 9.6220e-01 lowCoverage chr9 129611317 129612317 34628 FPGS ENSG00000136877 0.2495062 179 8 0.214464 411 16 0.1910703 391 19 0.255321 246 14 0.255268 376 19 0.285091 347 12 0.190493 324 19 0.178839 399 19 0.1359473 396 21 0.1824893 340 17 0.229282 490 19 0.2054570 198 16 0.2144885 296 11 0.192434 297 16 0.2012969 416 18 0.1987274 236 11 0.0833333 27 2 0.2308697 339 16 0.2276784 495 18 0.237737 228 10 0.284454 161 11 0.1922901 152 6 0.2076527 209 14 0.1738225 319 18 0.181688 262 18 0.1910020 508 19 0.217599 471 19 0.183314 268 20 0.2640068 469 18 0.2223837 537 19 0.2547018 666 18 0.2652378 280 13 0.1204653 309 11 0.1547450 336 18 0.4621940 528 8 0.436508 68 6 0.158137 325 18 0.2163455 492 17 0.2333193 253 17 0.1887126 209 11 0.2190942 190 8 0.1613486 171 8 0.2114715 169 8 0.4800396 0.4100169 0.4749824 0.5351186 0.4441391 0.604284 0.4758140 0.4358941 0.4484790 0.4533292 0.5440915 0.4537210 0.4317820 0.4447257 0.4672335 0.2465203 NA 0.5179660 0.3801681 0.5433125 0.4840558 0.3338477 0.4962193 0.5097518 0.4809929 0.5000655 0.47681309 0.438275 0.5769170 0.5017482 0.4147051 0.5028405 0.2284441 0.3984535 0.61513424 0.44571919 0.442537 0.3943732 0.4424994 0.4443429 0.4084811 0.4010589 0.3073163 5 0.3707393 0.361544 -5.1408e-03 19 0.223400 0.183973 0.03942706 8.8873e-01 9.8419e-01 insignificant 1.000000 1.000000 insignificant 0.99268799 0.97934687 insignificant 1.00000 1.00000 insignificant -0.01185628 0.4321281 insignificant 1.00000 insignificant 0.3713437 0.4059310 -0.00428241 14 0.204623 0.1843891 0.0202339 6.0843e-01 1.3213e-03 weaklyHypometh 1.0000e+00 1.3213e-01 insignificant 9.5855e-01 2.4669e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0500761 4.5879e-01 insignificant 1.0000e+00 insignificant 0.3718514 0.3487903 0.04868553 8 0.188439 0.2031371 -0.01469797 1.1859e-01 8.4602e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3062e-02 9.7056e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.2005e-03 7.5324e-01 insignificant 1.0000000 insignificant 0.363679 0.4057337 -0.01140950 14 0.2340936 0.1794056 0.05468799 9.5381e-01 2.5683e-03 weaklyHypometh 1.0000e+00 2.1403e-01 insignificant 9.1221e-01 4.9665e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0382198 5.6813e-01 insignificant 1.0000e+00 insignificant 0.363765 0.3487903 0.05704184 8 0.1880788 0.2031371 -0.01505827 2.7255e-01 8.3508e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.5108e-01 9.9807e-01 insignificant 1.0000e+00 1.00000000 insignificant 1.7057e-02 3.3238e-01 insignificant 1.0000000 insignificant 0.4089347 0.3487903 6.8758e-02 8 0.2260990 0.2031371 0.0229619 4.1798e-02 9.4545e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 1.3071e-01 9.9955e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.05527659 4.1852e-01 insignificant 1.0000e+00 insignificant chr9 129648217 129649217 34630 ENSG00000222455 0.8299634 479 11 0.769153 380 12 0.7984682 326 12 0.856344 427 11 0.847126 208 11 0.863351 434 11 0.775172 318 9 0.711928 354 12 0.8144771 310 12 0.8306777 254 12 0.723026 359 12 0.8272230 137 7 0.8093419 359 11 0.900695 141 7 0.7865013 356 11 0.8751546 194 11 0.7781807 74 4 0.8853639 479 9 0.8303033 399 11 0.847420 418 12 0.639664 135 7 0.8358214 199 11 0.8192370 352 11 0.8661204 127 10 0.701706 441 12 0.9036274 485 12 0.774001 257 11 0.762795 151 11 0.8118166 411 11 0.8597303 483 12 0.8436852 761 12 0.9122551 446 12 0.6696751 317 12 0.7747712 366 8 1.0000000 195 6 0.898580 214 8 0.614309 244 11 0.8362347 556 12 0.7544172 411 12 0.8685043 371 8 0.8889532 334 11 0.7575910 319 7 0.8069240 352 8 0.8402228 0.7824189 0.7289092 0.8401095 0.8517098 0.821709 0.8862869 0.7494411 0.8294121 0.8503096 0.8383599 0.7963144 0.8743064 0.8062400 0.8557247 0.8728794 0.8991320 0.8209703 0.8812884 0.8493185 0.7239242 0.8563886 0.7724892 0.8661032 0.7755655 0.8811921 0.81714179 0.856762 0.8150264 0.8944510 0.8724473 0.8444849 0.5420429 0.5872220 0.93258167 0.79664251 0.668852 0.7539397 0.8408043 0.8061308 0.8256633 0.6857384 0.7123709 7 0.8376816 0.849105 -7.2480e-03 11 0.702613 0.701619 0.00099389 6.8076e-01 2.8205e-01 insignificant 1.000000 1.000000 insignificant 0.85764915 0.39895213 insignificant 1.00000 1.00000 insignificant 0.00712190 0.7857432 insignificant 1.00000 insignificant 0.8377323 0.7674419 0.08238113 11 0.719134 0.6408003 0.0783341 1.8484e-05 5.1199e-02 weaklyHypermeth 1.6214e-04 1.0000e+00 weaklyHypermeth 6.2907e-01 5.4042e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0190652 7.6150e-01 insignificant 1.0000e+00 insignificant 0.8386541 0.7901511 0.04506298 7 0.806744 0.7331981 0.07354615 1.3068e-02 3.0613e-01 weaklyHypermeth 2.2149e-01 1.0000e+00 insignificant 5.7433e-02 4.6027e-01 insignificant 9.4153e-01 1.0000e+00 insignificant 2.7155e-03 9.3093e-01 insignificant 1.0000000 insignificant 0.849105 0.7678477 0.08501380 12 0.7016190 0.6784944 0.02312458 3.2063e-04 5.5632e-01 weaklyHypermeth 2.5049e-03 1.0000e+00 weaklyHypermeth 6.7369e-01 1.9034e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0119433 8.5544e-01 insignificant 1.0000e+00 insignificant 0.849870 0.7901511 0.05065555 8 0.7805373 0.7331981 0.04733928 9.7313e-03 5.8362e-01 weaklyHypermeth 1.6219e-01 1.0000e+00 insignificant 5.1353e-02 5.9542e-01 insignificant 8.2827e-01 1.00000000 insignificant -4.4064e-03 9.0541e-01 insignificant 1.0000000 insignificant 0.7685381 0.7901511 -3.8116e-02 8 0.7524575 0.7331981 0.0192594 3.4678e-01 1.1941e-01 insignificant 1.0000e+00 6.5973e-01 insignificant 2.9613e-01 6.6132e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01634963 8.0815e-01 insignificant 1.0000e+00 insignificant chr9 129763117 129764117 34636 FAM102A ENSG00000167106 0.9047009 152 5 0.859365 62 5 0.9581197 74 5 0.952381 72 4 0.978947 58 5 0.961858 169 5 0.914949 132 5 0.940909 77 5 0.9271116 110 5 0.9072727 54 5 0.920618 142 5 0.8641608 95 5 0.9746032 81 5 NA 0 0 0.8279412 66 5 0.9416667 90 5 0.9166667 52 5 0.9431373 62 5 0.9731225 79 5 0.916056 176 5 0.938095 57 5 0.8920635 60 5 0.9447802 114 5 0.7729293 47 5 1.000000 22 2 0.8419414 53 5 0.966013 83 5 0.893333 47 5 0.8631702 45 4 0.8897292 64 5 0.9857143 91 5 0.9032526 252 5 0.9371429 61 5 0.9647059 73 5 NA 0 0 0.969874 80 3 0.981818 62 5 0.9777778 32 5 0.9736842 135 5 0.9820468 216 5 0.8866667 82 5 0.9704918 202 5 0.9875000 79 5 0.9009055 0.8745116 0.9545529 0.9490232 0.9858300 0.960649 0.9120953 0.9349942 0.9314221 0.9005828 0.9108059 0.8433017 0.9783272 NA 0.8468137 0.9332265 0.9225427 0.9274761 0.9691142 0.9128870 0.9583333 0.8833944 0.9517734 0.7870111 1.0000000 0.8343606 0.97335344 0.868376 0.8564416 0.8919893 0.9858059 0.9017102 0.9274725 0.9604072 NA 0.96189692 0.981935 0.9672365 0.9738529 0.9850821 0.9130342 0.9687894 0.9815705 3 0.9184692 0.910160 1.0562e-02 5 0.921785 0.909892 0.01189324 2.8278e-01 9.1762e-01 insignificant 1.000000 1.000000 insignificant 0.35513020 0.88758176 insignificant 1.00000 1.00000 insignificant 0.01786674 0.4029649 lowCoverage 1.00000 lowCoverage 0.9184692 0.9577922 -0.04142479 5 0.921785 0.9635446 -0.0417591 9.8118e-01 2.1657e-03 weaklyHypometh 1.0000e+00 1.7820e-01 insignificant 9.7698e-01 9.5136e-03 weaklyHypometh 1.0000e+00 8.2457e-01 insignificant -0.0408117 4.1736e-03 lowCoverage 4.8530e-02 lowCoverage 0.9184692 0.9663866 -0.05183499 5 0.921785 0.9683126 -0.04652713 9.9841e-01 7.8241e-04 weaklyHypometh 1.0000e+00 4.1226e-02 weaklyHypometh 9.9945e-01 3.1401e-03 weaklyHypometh 1.0000e+00 1.4273e-01 insignificant -3.4626e-02 1.4591e-01 lowCoverage 1.0000000 lowCoverage 0.910160 0.9577922 -0.05023937 5 0.9098923 0.9635446 -0.05365234 9.8789e-01 1.1401e-02 weaklyHypometh 1.0000e+00 6.0008e-01 insignificant 9.9476e-01 2.3944e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0586785 1.1417e-02 lowCoverage 1.1650e-01 lowCoverage 0.910160 0.9663866 -0.05973336 5 0.9098923 0.9683126 -0.05842038 9.9939e-01 6.7255e-03 weaklyHypometh 1.0000e+00 3.0570e-01 insignificant 9.9949e-01 1.2405e-02 weaklyHypometh 1.0000e+00 0.87073733 insignificant -5.2493e-02 6.9601e-02 lowCoverage 1.0000000 lowCoverage 0.9577922 0.9663866 -1.0617e-02 5 0.9635446 0.9683126 -0.0047680 6.2690e-01 1.0534e-01 insignificant 1.0000e+00 6.0185e-01 insignificant 5.0298e-01 2.9450e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00618576 7.7084e-01 lowCoverage 1.0000e+00 lowCoverage chr9 129763517 129764517 34637 FAM102A ENSG00000167106 0.9047009 152 5 0.859365 62 5 0.9581197 74 5 0.952381 72 4 0.978947 58 5 0.961858 169 5 0.914949 132 5 0.940909 77 5 0.9271116 110 5 0.9072727 54 5 0.920618 142 5 0.8641608 95 5 0.9746032 81 5 NA 0 0 0.8279412 66 5 0.9416667 90 5 0.9166667 52 5 0.9431373 62 5 0.9731225 79 5 0.916056 176 5 0.938095 57 5 0.8920635 60 5 0.9447802 114 5 0.7729293 47 5 1.000000 22 2 0.8419414 53 5 0.966013 83 5 0.893333 47 5 0.8631702 45 4 0.8897292 64 5 0.9857143 91 5 0.9032526 252 5 0.9371429 61 5 0.9647059 73 5 NA 0 0 0.969874 80 3 0.981818 62 5 0.9777778 32 5 0.9736842 135 5 0.9820468 216 5 0.8866667 82 5 0.9704918 202 5 0.9875000 79 5 0.9009055 0.8745116 0.9545529 0.9490232 0.9858300 0.960649 0.9120953 0.9349942 0.9314221 0.9005828 0.9108059 0.8433017 0.9783272 NA 0.8468137 0.9332265 0.9225427 0.9274761 0.9691142 0.9128870 0.9583333 0.8833944 0.9517734 0.7870111 1.0000000 0.8343606 0.97335344 0.868376 0.8564416 0.8919893 0.9858059 0.9017102 0.9274725 0.9604072 NA 0.96189692 0.981935 0.9672365 0.9738529 0.9850821 0.9130342 0.9687894 0.9815705 3 0.9184692 0.910160 1.0562e-02 5 0.921785 0.909892 0.01189324 2.8278e-01 9.1762e-01 insignificant 1.000000 1.000000 insignificant 0.35513020 0.88758176 insignificant 1.00000 1.00000 insignificant 0.01786674 0.4029649 lowCoverage 1.00000 lowCoverage 0.9184692 0.9577922 -0.04142479 5 0.921785 0.9635446 -0.0417591 9.8118e-01 2.1657e-03 weaklyHypometh 1.0000e+00 1.7820e-01 insignificant 9.7698e-01 9.5136e-03 weaklyHypometh 1.0000e+00 8.2457e-01 insignificant -0.0408117 4.1736e-03 lowCoverage 4.8530e-02 lowCoverage 0.9184692 0.9663866 -0.05183499 5 0.921785 0.9683126 -0.04652713 9.9841e-01 7.8241e-04 weaklyHypometh 1.0000e+00 4.1226e-02 weaklyHypometh 9.9945e-01 3.1401e-03 weaklyHypometh 1.0000e+00 1.4273e-01 insignificant -3.4626e-02 1.4591e-01 lowCoverage 1.0000000 lowCoverage 0.910160 0.9577922 -0.05023937 5 0.9098923 0.9635446 -0.05365234 9.8789e-01 1.1401e-02 weaklyHypometh 1.0000e+00 6.0008e-01 insignificant 9.9476e-01 2.3944e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0586785 1.1417e-02 lowCoverage 1.1650e-01 lowCoverage 0.910160 0.9663866 -0.05973336 5 0.9098923 0.9683126 -0.05842038 9.9939e-01 6.7255e-03 weaklyHypometh 1.0000e+00 3.0570e-01 insignificant 9.9949e-01 1.2405e-02 weaklyHypometh 1.0000e+00 0.87073733 insignificant -5.2493e-02 6.9601e-02 lowCoverage 1.0000000 lowCoverage 0.9577922 0.9663866 -1.0617e-02 5 0.9635446 0.9683126 -0.0047680 6.2690e-01 1.0534e-01 insignificant 1.0000e+00 6.0185e-01 insignificant 5.0298e-01 2.9450e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00618576 7.7084e-01 lowCoverage 1.0000e+00 lowCoverage chr9 129884217 129885217 34651 SLC25A25 ENSG00000148339 0.8083868 260 9 0.662872 245 10 0.5843861 129 10 0.826132 208 9 0.700120 61 7 0.800624 295 10 0.576214 117 9 0.731026 134 9 0.6192259 79 7 0.8010281 90 8 0.774160 362 10 0.6065422 58 5 0.7598235 143 8 0.861905 26 3 0.8680901 79 7 0.5770833 35 3 0.7166667 22 2 0.7868794 217 9 0.8355658 181 10 0.757048 217 9 0.771667 51 3 0.8233333 54 5 0.7186241 248 10 0.7187777 80 7 0.810450 62 6 0.7887971 224 10 0.664112 102 7 0.535000 45 4 0.6431638 121 10 0.7882478 199 10 0.8090840 226 10 0.8041198 271 11 0.6695925 190 9 0.6813131 107 8 0.6597850 153 7 0.764310 52 4 0.742451 89 9 0.7406159 214 10 0.7389544 220 8 0.8187315 217 9 0.8199455 202 8 0.7441603 173 7 0.7644537 236 8 0.7887814 0.7782453 0.5453100 0.8521402 0.7746135 0.789272 0.6349182 0.7397775 0.7513870 0.7546902 0.7957309 0.6245169 0.7973609 0.7534288 0.8267885 0.6069677 0.7601535 0.7744131 0.8440571 0.7548715 0.8083333 0.8323293 0.7973019 0.7618873 0.7884906 0.8133117 0.67434035 0.679217 0.6438578 0.7961091 0.8353456 0.8261796 0.6594592 0.6321954 0.65641541 0.75711026 0.773417 0.7391830 0.7984961 0.8406441 0.8141710 0.7687009 0.7739953 2 0.7811972 0.800357 -1.3672e-02 9 0.770813 0.702148 0.06866458 9.5954e-01 3.8224e-01 insignificant 1.000000 1.000000 insignificant 0.78721700 0.25263942 insignificant 1.00000 1.00000 insignificant -0.00692574 0.8374956 insignificant 1.00000 insignificant 0.7809749 0.7229814 0.07172936 9 0.749978 0.6972761 0.0527017 8.7361e-04 9.9611e-01 weaklyHypermeth 6.2401e-03 1.0000e+00 weaklyHypermeth 1.7916e-01 6.6092e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0230111 4.2779e-01 insignificant 1.0000e+00 insignificant 0.7811972 0.7786260 -0.01991196 8 0.770813 0.7802381 -0.00942510 9.1251e-01 5.3996e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7155e-01 2.8752e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -4.4560e-02 1.3117e-01 insignificant 1.0000000 insignificant 0.800832 0.7229814 0.08493886 9 0.7659801 0.6972761 0.06870393 1.3884e-04 9.8926e-01 weaklyHypermeth 1.1107e-03 1.0000e+00 weaklyHypermeth 8.7330e-02 9.3441e-01 insignificant 5.5624e-01 1.0000e+00 insignificant 0.0299368 3.5110e-01 insignificant 1.0000e+00 insignificant 0.800357 0.7786260 -0.00629086 8 0.7021484 0.7802381 -0.07808968 6.4672e-01 8.4697e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.8577e-01 7.4581e-01 insignificant 1.0000e+00 1.00000000 insignificant -3.7634e-02 2.4226e-01 insignificant 1.0000000 insignificant 0.7229814 0.7784145 -8.1447e-02 8 0.6972761 0.7602597 -0.0629836 9.6006e-01 1.4913e-03 weaklyHypometh 1.0000e+00 1.3557e-02 weaklyHypometh 9.5282e-01 3.6517e-02 weaklyHypometh 1.0000e+00 2.8754e-01 insignificant -0.06757121 2.6088e-02 weaklyHypometh 2.5927e-01 insignificant chr9 129917217 129918217 34655 SLC25A25 ENSG00000148339 0.6854817 601 10 0.713596 326 11 0.7014243 218 12 0.688172 454 10 0.727283 213 9 0.729736 537 11 0.692541 276 10 0.723310 262 10 0.7506139 201 8 0.7394180 203 10 0.787593 493 12 0.7722854 124 9 0.7581042 226 11 0.790648 132 8 0.7358906 252 10 0.6705128 90 6 0.5673077 23 1 0.6276123 815 9 0.7169289 418 10 0.710448 551 11 0.691643 151 11 0.5899715 111 8 0.7209274 276 10 0.7168860 208 10 0.632947 303 9 0.7766001 326 10 0.680832 229 9 0.814638 124 7 0.7941687 335 8 0.7731285 343 10 0.7426989 485 12 0.7474888 516 11 0.6461509 223 10 0.5751706 327 10 0.5890640 272 8 0.701515 88 5 0.634494 264 10 0.6918960 446 12 0.6915087 489 9 0.7292833 502 10 0.6581039 453 9 0.6002399 789 9 0.7097923 351 9 0.7494805 0.7163064 0.7693348 0.7493816 0.7708967 0.770588 0.6748568 0.8094814 0.7876486 0.7818302 0.7919337 0.8134653 0.7923486 0.8234710 0.7398104 0.7787753 0.7801477 0.7352662 0.7707255 0.7800437 0.8334624 0.7527915 0.7740938 0.7718842 0.7885919 0.7997699 0.69005534 0.792938 0.8119036 0.7810419 0.7878876 0.7550972 0.7113456 0.7729585 0.68323994 0.80619994 0.773371 0.6225833 0.7741197 0.7568249 0.7617161 0.7490917 0.7902130 7 0.8166797 0.800412 -7.3631e-03 10 0.692320 0.755026 -0.06270669 8.9359e-01 3.9276e-01 insignificant 1.000000 1.000000 insignificant 0.91991521 0.39379600 insignificant 1.00000 1.00000 insignificant -0.00904893 0.6917374 insignificant 1.00000 insignificant 0.8169058 0.7331686 0.06419846 9 0.722235 0.6738975 0.0483376 4.8908e-04 3.5810e-01 weaklyHypermeth 3.5962e-03 1.0000e+00 weaklyHypermeth 3.7481e-01 3.3450e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0747302 1.3970e-02 weaklyHypermeth 1.3056e-01 insignificant 0.8169058 0.8386223 -0.00017419 10 0.722235 0.7286962 -0.00646109 4.9052e-01 2.0896e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.6489e-01 4.7313e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.6660e-02 1.9836e-01 insignificant 1.0000000 insignificant 0.800176 0.7327160 0.07343605 9 0.7165647 0.6220592 0.09450546 1.1892e-02 5.8703e-01 weaklyHypermeth 7.6723e-02 1.0000e+00 weaklyHypermeth 1.5618e-01 5.6486e-01 insignificant 9.0802e-01 1.0000e+00 insignificant 0.0837792 1.1709e-02 weaklyHypermeth 1.1732e-01 insignificant 0.800353 0.8386223 0.00992812 10 0.7346118 0.7286962 0.00591560 2.2772e-01 4.7715e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.7568e-01 6.6332e-01 insignificant 1.0000e+00 1.00000000 insignificant 4.5709e-02 1.5468e-01 insignificant 1.0000000 insignificant 0.7331686 0.8386223 -5.8499e-02 9 0.6738975 0.7286962 -0.0547987 1.5327e-01 3.0759e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.1118e-01 7.4863e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03807054 2.5090e-01 insignificant 1.0000e+00 insignificant chr9 130019317 130020317 34659 CIZ1 ENSG00000148337 0.6995911 243 8 0.724928 125 8 0.6401484 111 7 0.675158 201 6 0.741071 61 7 0.724408 312 9 0.586041 90 7 0.762454 180 8 0.6057613 71 3 0.5903479 101 7 0.690205 265 9 0.8247768 46 3 0.6974740 146 7 0.825397 45 5 0.8056989 108 6 0.9166667 36 3 0.7142857 16 2 0.7641799 219 7 0.5808247 109 3 0.759447 218 8 0.908832 40 3 0.7542088 60 6 0.6700654 139 7 0.7480667 69 6 0.656944 47 5 0.7047838 229 7 0.740485 66 6 0.870370 31 2 0.6991680 143 8 0.7639390 244 9 0.6761531 215 7 0.7102697 327 9 0.7193862 141 9 0.7177594 101 6 0.5430195 102 5 0.734375 27 2 0.522700 77 6 0.7045268 189 9 0.7523810 136 7 0.7371835 204 6 0.7687144 146 6 0.6559182 176 7 0.8610550 187 7 0.8488753 0.7912567 0.7304310 0.8248086 0.8240347 0.815271 0.6931419 0.8799970 0.7488162 0.8193965 0.8527184 0.7936888 0.8535904 0.8546661 0.9028132 0.8131094 0.8362710 0.8652502 0.7778575 0.8586277 0.8984096 0.9086114 0.8152235 0.8754811 0.8073576 0.8617433 0.87738251 0.930380 0.8299427 0.8685339 0.8491168 0.8482302 0.8167933 0.8302210 0.80110691 0.86729958 0.717589 0.8555519 0.9145570 0.8895616 0.8654958 0.8368003 0.9306994 2 0.8187199 0.865839 -2.6522e-02 7 0.713424 0.725370 -0.01194617 9.5894e-01 1.5127e-02 weaklyHypometh 1.000000 0.565848 insignificant 0.94630858 0.02182007 weaklyHypometh 1.00000 1.00000 insignificant -0.02549736 0.4024147 insignificant 1.00000 insignificant 0.8187199 0.7692308 0.03468000 6 0.713424 0.6696242 0.0437998 2.5399e-02 7.8263e-01 weaklyHypermeth 1.4767e-01 1.0000e+00 insignificant 1.1241e-01 6.7062e-01 insignificant 6.8545e-01 1.0000e+00 insignificant 0.0594820 2.1710e-01 insignificant 1.0000e+00 insignificant 0.8187199 0.8987044 -0.06602717 7 0.713424 0.7799112 -0.06648719 9.9827e-01 3.3594e-03 weaklyHypometh 1.0000e+00 1.0180e-01 insignificant 9.5758e-01 1.0766e-02 weaklyHypometh 1.0000e+00 3.8449e-01 insignificant -3.8607e-02 3.4722e-01 insignificant 1.0000000 insignificant 0.865839 0.7692308 0.05657283 6 0.7253702 0.6696242 0.05574601 4.7479e-03 9.8350e-01 weaklyHypermeth 3.2972e-02 1.0000e+00 weaklyHypermeth 1.5712e-02 9.7124e-01 weaklyHypermeth 1.2086e-01 1.0000e+00 insignificant 0.0849794 9.6728e-02 insignificant 6.4085e-01 insignificant 0.865839 0.8987044 -0.03508304 7 0.7253702 0.7799112 -0.05454102 8.6918e-01 2.8524e-02 weaklyHypometh 1.0000e+00 8.1498e-01 insignificant 6.3811e-01 3.8368e-01 insignificant 1.0000e+00 1.00000000 insignificant -1.3110e-02 7.4996e-01 insignificant 1.0000000 insignificant 0.7692308 0.8987044 -1.0132e-01 6 0.6696242 0.7799112 -0.1102870 9.9762e-01 2.2411e-03 weaklyHypometh 1.0000e+00 1.8992e-02 weaklyHypometh 9.5188e-01 5.2400e-02 insignificant 1.0000e+00 3.9399e-01 insignificant -0.09808923 8.8805e-02 insignificant 6.0003e-01 insignificant chr9 130026017 130027017 34660 CIZ1 ENSG00000148337 0.8650618 331 12 0.828000 596 13 0.7156028 278 13 0.838631 246 12 0.866638 184 10 0.852753 592 13 0.551321 302 10 0.783467 253 12 0.7121977 173 10 0.6780934 162 10 0.728772 568 13 0.8029582 95 10 0.7199872 149 10 0.871212 114 8 0.7006580 222 10 0.8756410 123 10 0.5735403 341 5 0.7056665 360 11 0.8431710 468 12 0.878866 575 13 0.728343 114 8 0.8468198 81 8 0.7697803 322 13 0.9104809 155 11 0.883094 170 11 0.8326771 587 13 0.803817 210 11 0.746768 74 6 0.8522771 393 11 0.7245808 615 13 0.7427793 760 13 0.8494980 679 12 0.6157691 371 13 0.6810708 219 12 0.8492029 601 13 0.693680 81 5 0.617435 288 13 0.7080304 570 13 0.7003478 517 12 0.8605864 482 12 0.7706437 278 10 0.9116420 280 10 0.8553405 314 12 0.8672898 0.8219839 0.7456445 0.8656286 0.8561174 0.844170 0.7694467 0.9194152 0.8371859 0.8722267 0.8332279 0.8137395 0.8538702 0.8921270 0.8265975 0.9056314 0.8408261 0.8687518 0.8859713 0.8911361 0.8282777 0.8858400 0.8621778 0.9261807 0.8969370 0.8804167 0.87269618 0.892034 0.8571952 0.8478424 0.8342162 0.8412302 0.7051930 0.6923233 0.85493093 0.76072924 0.739571 0.8373156 0.8461590 0.8584712 0.8999805 0.9106224 0.8830942 7 0.8618721 0.905769 -2.0012e-02 12 0.739306 0.766229 -0.02692316 9.9987e-01 5.2228e-03 weaklyHypometh 1.000000 0.348187 insignificant 0.98055487 0.03063684 weaklyHypometh 1.00000 1.00000 insignificant -0.03796438 0.1982024 insignificant 1.00000 insignificant 0.8618721 0.8258216 0.05012022 12 0.739306 0.6444209 0.0948848 4.4059e-05 8.8741e-01 weaklyHypermeth 3.6716e-04 1.0000e+00 weaklyHypermeth 9.2363e-03 9.9114e-01 weaklyHypermeth 7.5707e-02 1.0000e+00 weaklyHypermeth 0.0754140 9.9652e-02 insignificant 7.0130e-01 insignificant 0.8627066 0.8812834 -0.02089938 11 0.741039 0.8244174 -0.08337853 6.6568e-01 6.2753e-03 weaklyHypometh 1.0000e+00 1.6960e-01 insignificant 8.7706e-01 1.0135e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -5.0100e-02 2.8702e-01 insignificant 1.0000000 insignificant 0.905769 0.8258216 0.07416745 13 0.7662289 0.6444209 0.12180796 5.9590e-06 1.0000e+00 weaklyHypermeth 5.7854e-05 1.0000e+00 weaklyHypermeth 1.0671e-03 1.0000e+00 weaklyHypermeth 1.0832e-02 1.0000e+00 weaklyHypermeth 0.1133784 2.0888e-02 weaklyHypermeth 1.8163e-01 insignificant 0.906001 0.8812834 0.00406082 11 0.7972524 0.8244174 -0.02716501 9.1155e-02 3.0810e-01 insignificant 9.7925e-01 1.0000e+00 insignificant 4.1346e-01 6.0181e-01 insignificant 1.0000e+00 1.00000000 insignificant -1.2136e-02 7.8091e-01 insignificant 1.0000000 insignificant 0.8265162 0.8812834 -5.8174e-02 11 0.7066384 0.8244174 -0.1177790 9.9943e-01 1.7279e-04 weaklyHypometh 1.0000e+00 1.9198e-03 weaklyHypometh 9.9955e-01 5.1845e-04 weaklyHypometh 1.0000e+00 7.8553e-03 weaklyHypometh -0.12551415 3.7393e-02 weaklyHypometh 3.3687e-01 insignificant chr9 130046317 130047317 34661 MIR199B ENSG00000207581 0.5639340 257 6 0.421251 199 9 0.4833576 223 8 0.502733 218 8 0.445426 158 8 0.541233 350 8 0.591345 167 8 0.520474 211 8 0.3944242 133 8 0.5688532 197 8 0.581477 305 8 0.2637768 83 8 0.4123994 130 7 0.434801 137 8 0.5198583 192 8 0.4202896 81 5 1.0000000 184 2 0.3791247 383 9 0.5758136 257 8 0.322420 261 7 0.341055 168 7 0.4178982 72 3 0.3709010 205 8 0.4790440 201 8 0.616703 84 6 0.4242838 327 10 0.266650 245 11 0.421409 98 7 0.4431754 306 8 0.5185002 266 9 0.4268587 493 9 0.4513340 256 8 0.0022321 319 8 0.0113246 395 8 0.0022727 573 8 0.000000 16 2 0.193849 237 7 0.1472641 393 11 0.4916486 250 8 0.4452124 252 7 0.2880846 212 4 0.2329623 264 8 0.4721392 221 8 0.8097174 0.5183741 0.6793263 0.7166855 0.6291882 0.726578 0.7013859 0.6763057 0.6858627 0.7463798 0.7157339 0.7793317 0.7221162 0.7242165 0.6700226 0.6678778 0.7961635 0.4088557 0.7260476 0.6952105 0.6395542 0.5568180 0.6361260 0.6140880 0.6795574 0.7126524 0.60659562 0.579756 0.7310352 0.6806612 0.5944022 0.6927542 0.0023819 0.0251074 0.00426829 0.00309489 0.005907 0.1269321 0.7841430 0.6264923 0.6373631 0.5217210 0.5834167 3 0.6026699 0.541912 2.1809e-02 8 0.486409 0.395324 0.09108469 5.6236e-02 9.9923e-01 insignificant 1.000000 1.000000 insignificant 0.05954241 0.99990384 insignificant 1.00000 1.00000 insignificant 0.06566519 0.1268923 insignificant 1.00000 insignificant 0.6022314 0.0320911 0.56439550 8 0.464299 0.1764936 0.2878056 6.2172e-34 1.0000e+00 hypermethylated 2.3912e-32 1.0000e+00 hypermethylated 1.0515e-12 1.0000e+00 hypermethylated 4.0441e-11 1.0000e+00 hypermethylated 0.4376591 2.5306e-07 hypermethylated 1.1503e-05 hypermethylated 0.6022368 0.6510851 0.03294697 7 0.437847 0.4176786 0.02016858 1.7632e-01 9.9503e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.1906e-01 9.9978e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.1114e-01 1.1358e-01 insignificant 1.0000000 insignificant 0.542111 0.0321244 0.50445209 8 0.4150902 0.1941430 0.22094723 3.6903e-33 9.9983e-01 hypermethylated 1.4761e-31 1.0000e+00 hypermethylated 6.3100e-10 1.0000e+00 hypermethylated 1.8559e-08 1.0000e+00 hypermethylated 0.3719939 6.3395e-06 hypermethylated 2.1132e-04 hypermethylated 0.541759 0.6507937 0.01192993 7 0.3755964 0.3834244 -0.00782808 2.8281e-01 9.5167e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.5310e-01 9.9912e-01 insignificant 1.0000e+00 1.00000000 insignificant 4.5475e-02 4.6482e-01 insignificant 1.0000000 insignificant 0.0311365 0.6505421 -6.1437e-01 7 0.1517295 0.3956955 -0.2439661 1.0000e+00 8.3274e-15 hypomethylated 1.0000e+00 2.8715e-13 hypomethylated 1.0000e+00 1.0413e-04 hypomethylated 1.0000e+00 1.8595e-03 hypomethylated -0.32651895 1.1683e-03 weaklyHypometh 2.9957e-02 weaklyHypometh chr9 130437117 130438117 34674 SPTAN1 ENSG00000197694 0.6254684 125 6 0.414127 166 7 0.1790335 163 6 0.534415 126 6 0.350975 111 6 0.661339 136 6 0.552799 152 6 0.442796 150 6 0.4107724 133 6 0.4478305 125 6 0.501610 204 7 0.3722371 138 6 0.3792241 125 6 0.312353 42 3 0.5077206 119 7 0.3447722 85 6 0.2301587 74 4 0.2931157 94 6 0.1424154 137 6 0.586957 111 6 0.528104 77 4 0.4661066 70 6 0.5162530 159 6 0.3701175 88 6 0.739246 308 5 0.4864561 174 7 0.349804 110 6 0.363772 68 6 0.5489795 106 6 0.5621273 195 6 0.6433706 232 7 0.6021198 176 6 0.2063492 167 7 0.2500000 171 6 0.0111111 114 5 0.142857 117 7 0.181111 143 9 0.1250000 233 7 0.6481669 142 6 0.6208902 173 6 0.6135186 115 6 0.4957282 204 6 0.7165444 116 6 0.6152013 0.2620998 0.2093550 0.5102959 0.3206511 0.521492 0.4502644 0.3234480 0.3622933 0.3396942 0.4389406 0.3646550 0.2840519 0.3859843 0.4802669 0.3080151 0.2258858 0.2257666 0.1625918 0.5427143 0.4312948 0.3590075 0.4936091 0.3460173 0.5928504 0.4663915 0.35121155 0.387169 0.3812609 0.3607078 0.4328119 0.5681702 0.0000000 0.0000000 0.00532481 0.00000000 0.015974 0.0000000 0.6258296 0.4660031 0.5925375 0.4309561 0.4609793 6 0.3899721 0.438927 -8.3931e-02 6 0.399825 0.417286 -0.01746176 1.0000e+00 2.1458e-02 weaklyHypometh 1.000000 0.591860 insignificant 0.99982411 0.08257246 insignificant 1.00000 1.00000 insignificant -0.10019868 0.0407613 weaklyHypometh 1.00000 insignificant 0.3899721 0.0518519 0.35803779 6 0.423141 0.1685450 0.2545956 1.7852e-22 9.9823e-01 hypermethylated 4.0573e-21 1.0000e+00 hypermethylated 1.1526e-13 9.9723e-01 hypermethylated 5.4886e-12 1.0000e+00 hypermethylated 0.2617678 4.8846e-05 hypermethylated 1.1722e-03 hypermethylated 0.3848644 0.5195155 -0.16703057 6 0.436478 0.5177668 -0.08128908 9.9983e-01 2.5877e-06 weaklyHypometh 1.0000e+00 4.3128e-04 weaklyHypometh 9.9983e-01 3.4470e-05 weaklyHypometh 1.0000e+00 5.7449e-03 weaklyHypometh -2.0446e-01 1.2343e-03 weaklyHypometh 0.0587769 weaklyHypometh 0.439429 0.0519068 0.41230540 6 0.5100168 0.1872722 0.32274463 1.3258e-29 9.9970e-01 hypermethylated 4.7350e-28 1.0000e+00 hypermethylated 3.0043e-12 9.9956e-01 hypermethylated 1.6783e-10 1.0000e+00 hypermethylated 0.3619665 2.8086e-06 hypermethylated 1.1234e-04 hypermethylated 0.438828 0.5233645 -0.07256809 6 0.5688016 0.6492850 -0.08048332 9.9771e-01 4.3766e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9983e-01 1.7588e-01 insignificant 1.0000e+00 1.00000000 insignificant -1.0427e-01 5.7843e-02 insignificant 0.9640551 insignificant 0.0432900 0.5202156 -4.9204e-01 6 0.1418774 0.5917335 -0.4498561 9.4380e-01 4.3002e-26 hypomethylated 1.0000e+00 3.0716e-24 hypomethylated 9.9921e-01 6.7793e-10 hypomethylated 1.0000e+00 4.5195e-08 hypomethylated -0.46623157 6.8068e-06 hypomethylated 5.2360e-04 hypomethylated chr9 130704317 130705317 34679 LRRC8A ENSG00000136802 0.9308134 325 7 0.852049 246 7 0.8427816 117 5 0.924237 291 7 0.927871 107 5 0.981292 361 7 0.930382 196 7 0.960602 131 6 0.8786584 58 4 0.7425685 109 7 0.872993 165 6 0.8084554 49 4 0.6428571 36 1 0.597222 55 4 0.6559524 63 5 0.6562500 42 3 1.0000000 1 0 0.8025018 311 6 0.9167227 217 7 0.940083 267 7 0.875000 75 4 0.9579710 87 3 0.7611956 142 5 0.8640873 84 6 0.950503 199 5 0.8295675 205 6 0.867537 126 5 0.689773 38 4 0.9281105 145 7 0.9357304 242 5 0.8603596 307 6 0.9451310 320 6 0.8551023 163 6 0.9980159 173 6 0.9375000 65 2 1.000000 62 4 0.488410 155 7 0.9245611 280 7 0.9366026 328 7 0.8991640 282 7 0.9340961 244 7 0.9227273 104 6 0.8521870 209 6 0.9307913 0.9029928 0.8669813 0.9561378 0.9562798 0.959915 0.9670594 0.9346909 0.9342279 0.9092664 0.9035102 0.8427899 0.9539132 0.8931779 0.8895753 0.9291516 NA 0.9042782 0.9358918 0.9753858 1.0000000 0.9303883 0.8770902 0.8724796 0.9307311 0.9262387 0.88406078 0.878501 0.9495523 0.9202387 0.9293093 0.9410055 0.8805316 0.9930556 0.98192480 0.96528811 0.831424 0.9478332 0.9559722 0.9315542 0.9786504 0.9169533 0.9466506 2 0.9265501 0.926396 2.9502e-03 6 0.847970 0.846807 0.00116252 7.2249e-01 6.6742e-01 insignificant 1.000000 1.000000 insignificant 0.94953738 0.59127257 insignificant 1.00000 1.00000 insignificant -0.02886583 0.4320751 insignificant 1.00000 insignificant 0.9265501 0.9196429 0.00178420 7 0.847970 0.7077265 0.1402433 6.2820e-01 5.6637e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8596e-01 4.5178e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0240502 7.8267e-01 insignificant 1.0000e+00 insignificant 0.9272959 0.9562982 -0.02579864 7 0.856837 0.9257608 -0.06892363 9.9811e-01 5.1563e-02 insignificant 1.0000e+00 7.5099e-01 insignificant 9.6507e-01 3.1261e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -6.5741e-02 4.9456e-02 weaklyHypometh 0.6868936 insignificant 0.926396 0.9196429 -0.00310950 6 0.8468072 0.7077265 0.13908080 4.0206e-01 4.9978e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3191e-01 7.5486e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0048156 9.5528e-01 insignificant 1.0000e+00 insignificant 0.926755 0.9562982 -0.03054433 6 0.8710091 0.9257608 -0.05475178 9.9423e-01 3.4848e-02 weaklyHypometh 1.0000e+00 8.9354e-01 insignificant 8.2577e-01 3.9712e-01 insignificant 1.0000e+00 1.00000000 insignificant -3.6875e-02 2.1294e-01 insignificant 1.0000000 insignificant 0.9226457 0.9562982 -2.3680e-02 7 0.8429914 0.9257608 -0.0827694 8.4199e-01 3.0177e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.5228e-01 9.5759e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04169050 6.2470e-01 insignificant 1.0000e+00 insignificant chr9 130823617 130824617 34682 NUP188 ENSG00000095319 0.8817785 422 12 0.874911 277 12 0.8459012 293 12 0.930212 457 9 0.894194 185 12 0.889216 437 12 0.904859 249 12 0.881066 222 12 0.8395630 275 10 0.9110762 228 10 0.867470 310 12 0.9116424 193 8 0.8134136 307 10 0.923341 66 4 0.8652857 251 12 0.9307890 156 12 0.8892551 108 10 0.8632111 550 10 0.8455276 252 10 0.915485 336 12 0.880061 154 10 0.7680556 191 9 0.8824303 307 12 0.7942588 142 10 0.911681 250 9 0.8910238 320 12 0.876392 190 11 0.985859 115 6 0.8390359 256 12 0.9139074 372 12 0.8836585 475 12 0.9084445 419 12 0.6923176 288 12 0.6810123 259 10 0.7472727 410 10 0.797854 71 5 0.652442 200 10 0.8200033 393 12 0.8572615 397 12 0.8585231 406 12 0.8175286 407 10 0.7980778 359 10 0.8766374 429 10 0.8899418 0.8900335 0.8340669 0.9164782 0.8796153 0.880838 0.8910905 0.8463389 0.8721896 0.9025070 0.8570428 0.8990107 0.7882355 0.8679021 0.8279131 0.9709745 0.8924715 0.8309376 0.8404356 0.9220607 0.8855330 0.7602778 0.8590104 0.8407268 0.8922842 0.8922946 0.89997205 0.963309 0.8167908 0.8985239 0.8234627 0.8974534 0.7900928 0.6798800 0.78581092 0.89823834 0.751371 0.9144952 0.8428263 0.8856559 0.8011376 0.7967877 0.8586226 5 0.8756728 0.879035 -5.5952e-05 12 0.885119 0.884492 0.00062751 6.9954e-01 7.0846e-01 insignificant 1.000000 1.000000 insignificant 0.70963326 0.78195931 insignificant 1.00000 1.00000 insignificant 0.00600932 0.7430348 insignificant 1.00000 insignificant 0.8756728 0.7236274 0.12749516 12 0.885119 0.7476591 0.1374603 9.3136e-14 9.7212e-01 weaklyHypermeth 1.2762e-12 1.0000e+00 weaklyHypermeth 2.7884e-05 9.7102e-01 weaklyHypermeth 3.6213e-04 1.0000e+00 weaklyHypermeth 0.1520930 2.0709e-03 weaklyHypermeth 2.6214e-02 weaklyHypermeth 0.8756728 0.8223223 0.04120981 10 0.885119 0.8326088 0.05251052 3.8710e-04 9.9882e-01 weaklyHypermeth 1.2097e-02 1.0000e+00 weaklyHypermeth 1.9072e-02 9.5876e-01 weaklyHypermeth 4.2383e-01 1.0000e+00 insignificant 4.2304e-02 3.9594e-02 weaklyHypermeth 0.6284829 insignificant 0.879035 0.7236274 0.13670860 12 0.8844918 0.7476591 0.13683275 2.5210e-09 9.1937e-01 weaklyHypermeth 3.0012e-08 1.0000e+00 weaklyHypermeth 1.0552e-03 9.5800e-01 weaklyHypermeth 1.0832e-02 1.0000e+00 weaklyHypermeth 0.1460836 1.5167e-03 weaklyHypermeth 2.1982e-02 weaklyHypermeth 0.879035 0.8223223 0.04267027 10 0.8844918 0.8326088 0.05188301 1.3040e-02 9.9962e-01 weaklyHypermeth 2.0376e-01 1.0000e+00 insignificant 1.0004e-01 9.6736e-01 insignificant 1.0000e+00 1.00000000 insignificant 3.6295e-02 1.2254e-01 insignificant 1.0000000 insignificant 0.7236274 0.8223223 -1.1621e-01 10 0.7476591 0.8326088 -0.0849497 5.8310e-01 3.3088e-03 weaklyHypometh 1.0000e+00 2.6901e-02 weaklyHypometh 7.9808e-01 3.3518e-02 weaklyHypometh 1.0000e+00 2.6823e-01 insignificant -0.10978879 8.7847e-03 weaklyHypometh 1.2641e-01 insignificant chr9 130871817 130872817 34683 ENSG00000208596 0.9455191 289 5 0.892941 78 5 0.9485714 79 5 0.955725 276 5 0.914286 41 5 0.961973 235 5 0.862465 91 5 0.972414 79 5 0.8911765 33 1 0.9818182 47 5 0.954705 170 5 0.9333333 18 1 0.8761905 42 5 0.963636 23 1 0.9483333 46 5 0.9200000 24 4 NA 0 0 0.9305773 662 5 0.9861176 160 5 0.951627 220 5 0.936275 80 5 0.9750000 77 5 0.9231397 114 5 1.0000000 63 5 0.912545 169 5 0.9336364 152 5 0.896667 37 4 0.960000 30 4 0.9272241 124 5 0.9282732 151 5 0.9366569 251 5 0.9607200 212 5 0.8474747 103 5 0.8869565 138 5 0.7953488 189 5 1.000000 16 0 0.931429 40 5 0.8639216 168 5 0.9425506 195 5 0.9207754 170 5 0.9298021 182 5 0.9255797 252 5 0.8910908 215 5 0.9287085 0.8545037 0.9211310 0.9397608 0.9330357 0.956349 0.8331619 0.9504310 0.8552390 0.9673295 0.9427582 0.8802083 0.8344494 0.9346591 0.9315755 0.9375000 NA 0.8994140 0.9810294 0.9459253 0.9332874 0.9799805 0.9116360 1.0000000 0.9117557 0.9167377 0.86510417 0.967187 0.9242308 0.8837168 0.9046463 0.9560340 0.7902068 0.8057065 0.63699128 0.79779820 0.905804 0.7622549 0.9228922 0.8849229 0.9021699 0.9002151 0.8553856 1 0.9402985 0.943151 3.4530e-03 5 0.944198 0.941232 0.00296585 3.9026e-01 8.0381e-01 insignificant 1.000000 1.000000 insignificant 0.26196765 0.73076454 insignificant 1.00000 1.00000 insignificant -0.00445476 0.7023520 lowCoverage 1.00000 lowCoverage 0.9402985 0.8562691 0.08527319 5 0.944198 0.8687188 0.0754796 2.0331e-04 7.5680e-02 weaklyHypermeth 1.5760e-03 1.0000e+00 weaklyHypermeth 1.2371e-01 1.5195e-01 insignificant 7.4076e-01 1.0000e+00 insignificant 0.0488682 1.5744e-01 lowCoverage 9.7786e-01 lowCoverage 0.9402985 0.9092702 0.02624072 5 0.944198 0.9209454 0.02325294 4.7403e-02 8.6738e-01 weaklyHypermeth 6.2757e-01 1.0000e+00 insignificant 3.0684e-02 9.9361e-01 weaklyHypermeth 5.9572e-01 1.0000e+00 insignificant 1.4430e-02 2.4248e-01 lowCoverage 1.0000000 lowCoverage 0.943151 0.8562691 0.07289515 5 0.9412325 0.8687188 0.07251370 5.5297e-03 2.4707e-02 weaklyHypermeth 3.7875e-02 1.0000e+00 weaklyHypermeth 2.0580e-01 3.7637e-02 inconclusive 1.0000e+00 1.0000e+00 insignificant 0.0533230 1.2887e-01 lowCoverage 8.0046e-01 lowCoverage 0.943151 0.9092702 0.01763891 5 0.9412325 0.9209454 0.02028709 6.2736e-02 5.1593e-01 insignificant 7.2949e-01 1.0000e+00 insignificant 7.7046e-02 8.5919e-01 insignificant 1.0000e+00 1.00000000 insignificant 1.8885e-02 1.3830e-01 lowCoverage 1.0000000 lowCoverage 0.8562691 0.9092702 -6.0449e-02 5 0.8687188 0.9209454 -0.0522266 2.2270e-02 2.0871e-01 inconclusive 1.0000e+00 1.0000e+00 insignificant 1.6622e-02 6.7944e-01 inconclusive 1.0000e+00 1.0000e+00 insignificant -0.03443802 2.9913e-01 lowCoverage 1.0000e+00 lowCoverage chr9 130969317 130970317 34687 PPP2R4 ENSG00000119383 0.5878592 418 7 0.436050 424 7 0.4244287 153 7 0.489464 408 7 0.408040 94 7 0.537752 504 7 0.451271 180 7 0.549067 216 7 0.4350808 179 7 0.4184908 104 5 0.452100 277 7 0.4919501 84 5 0.4490187 183 7 0.141573 62 3 0.3774948 125 5 0.4776757 67 5 0.6912022 193 4 0.4487933 545 7 0.4416360 301 7 0.458976 373 7 0.486447 80 7 0.5692918 48 4 0.3659869 180 7 0.3724596 152 5 0.461846 302 5 0.4527426 404 7 0.369617 112 5 0.468707 71 5 0.5005092 284 5 0.4981684 378 7 0.4666965 590 7 0.5008466 332 7 0.2874132 280 7 0.2201166 238 5 0.1979592 127 6 0.323177 103 6 0.196429 226 5 0.4783083 355 7 0.5394717 378 7 0.4996658 353 7 0.5542180 397 5 0.4702317 498 7 0.4718746 370 7 0.4392774 0.3524035 0.3084118 0.3540503 0.3529962 0.420968 0.3407481 0.3927790 0.3363031 0.3250830 0.3628326 0.3623431 0.3585078 0.3725042 0.3320262 0.3325293 0.3786212 0.3760949 0.3565365 0.3378893 0.3604316 0.4149421 0.3021081 0.3703948 0.3316255 0.3247936 0.31640104 0.372876 0.3437825 0.3784433 0.3748226 0.3776742 0.1287758 0.0569591 0.06166743 0.17673926 0.077036 0.3751548 0.4114581 0.3804456 0.3628632 0.3478565 0.3575301 5 0.3314928 0.327874 1.1121e-02 7 0.473278 0.469404 0.00387384 1.7766e-01 9.1225e-01 insignificant 1.000000 1.000000 insignificant 0.14830194 0.74056508 insignificant 1.00000 1.00000 insignificant -0.00104706 0.9716057 insignificant 1.00000 insignificant 0.3314928 0.1760722 0.18871418 7 0.473278 0.2986838 0.1745939 1.2594e-14 9.9247e-01 weaklyHypermeth 1.8521e-13 1.0000e+00 weaklyHypermeth 2.2269e-08 9.5625e-01 weaklyHypermeth 4.6393e-07 1.0000e+00 weaklyHypermeth 0.1744957 8.1223e-03 weaklyHypermeth 8.2319e-02 weaklyHypermeth 0.3314928 0.2500000 -0.00211970 7 0.473278 0.4924627 -0.01918503 5.4952e-01 3.3787e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.6398e-01 1.7614e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -4.8696e-02 1.0708e-01 insignificant 1.0000000 insignificant 0.327874 0.1760722 0.17712176 7 0.4694039 0.2986838 0.17072009 4.3475e-11 9.9862e-01 weaklyHypermeth 5.7967e-10 1.0000e+00 weaklyHypermeth 1.3858e-06 9.9750e-01 weaklyHypermeth 2.4574e-05 1.0000e+00 weaklyHypermeth 0.1755428 8.4419e-03 weaklyHypermeth 8.9807e-02 weaklyHypermeth 0.327874 0.2500000 -0.01676440 7 0.4694039 0.4924627 -0.02305887 9.3223e-01 7.8043e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9052e-01 8.0144e-02 insignificant 1.0000e+00 1.00000000 insignificant -4.7649e-02 7.8711e-02 insignificant 1.0000000 insignificant 0.1760722 0.2500000 -2.0734e-01 7 0.2986838 0.4924627 -0.1937790 9.9733e-01 1.2383e-09 hypomethylated 1.0000e+00 2.7519e-08 hypomethylated 9.9925e-01 5.1293e-07 hypomethylated 1.0000e+00 2.0517e-05 hypomethylated -0.22319191 2.7156e-03 weaklyHypometh 5.4311e-02 weaklyHypometh chr9 131048517 131049517 34692 ENSG00000220992 0.5992348 122 7 0.611431 176 10 0.7629003 139 7 0.798485 67 6 0.768782 113 8 0.823318 191 12 0.695397 178 9 0.662112 109 7 0.7987854 90 5 0.5909864 79 5 0.715589 205 9 0.8355772 70 3 0.6667800 134 8 0.615385 56 5 0.7104644 92 4 0.6142857 52 3 0.9111183 45 3 0.5874542 57 6 0.5916667 81 7 0.781527 101 7 0.537078 89 6 0.9345238 25 3 0.6492931 122 8 0.7626984 92 6 0.681818 38 2 0.6871846 176 9 0.602579 71 8 0.696759 47 4 0.6898148 73 7 0.6845689 193 8 0.6857592 238 7 0.7617951 207 7 0.5720392 152 7 0.6006038 92 6 0.4907407 82 5 0.340000 39 5 0.551210 171 12 0.5019394 125 7 0.6788445 111 9 0.8561079 178 10 0.7945887 86 7 0.6426282 97 6 0.7508418 161 12 0.9056743 0.8382871 0.8713450 0.9199711 0.9383545 0.926831 0.8966999 0.9290329 0.9013158 0.9029503 0.8245096 0.9207759 0.9287547 0.9627247 0.8970069 0.8844995 0.8836601 0.8427554 0.9379835 0.9334344 0.8882788 0.8492593 0.7883183 0.8911749 0.6119404 0.7957235 0.82559524 0.817633 0.8285024 0.8943569 0.9169288 0.9421536 0.8278022 0.9031375 0.93087974 0.47075835 0.793509 0.7659593 0.8021732 0.8570803 0.8606884 0.9246894 0.8685833 2 0.8034307 0.764620 2.5667e-02 7 0.669261 0.662420 0.00684130 2.1873e-01 9.0655e-01 insignificant 1.000000 1.000000 insignificant 0.32329996 0.75074974 insignificant 1.00000 1.00000 insignificant 0.00924123 0.7967484 insignificant 1.00000 insignificant 0.8034307 0.6646434 0.12105818 8 0.669261 0.5206140 0.1486471 1.5090e-06 1.0000e+00 weaklyHypermeth 1.4510e-05 1.0000e+00 weaklyHypermeth 3.0055e-02 9.9998e-01 weaklyHypermeth 2.1018e-01 1.0000e+00 insignificant 0.1976418 1.6095e-03 weaklyHypermeth 2.1749e-02 weaklyHypermeth 0.8052312 0.8009479 -0.00281454 8 0.691246 0.6646944 0.02655129 9.4925e-02 4.5224e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.3528e-01 8.0539e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -3.7538e-02 4.2592e-01 insignificant 1.0000000 insignificant 0.764620 0.6646434 0.09361400 7 0.6624199 0.5206140 0.14180585 1.6485e-02 9.9999e-01 weaklyHypermeth 1.0567e-01 1.0000e+00 insignificant 1.7373e-01 9.9998e-01 insignificant 9.8711e-01 1.0000e+00 insignificant 0.1884005 2.2766e-03 weaklyHypermeth 3.1620e-02 weaklyHypermeth 0.764879 0.8009479 -0.05131330 7 0.6757956 0.6646944 0.01110113 7.6485e-01 3.4072e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.7518e-01 6.8081e-01 insignificant 1.0000e+00 1.00000000 insignificant -4.6780e-02 3.5250e-01 insignificant 1.0000000 insignificant 0.6661585 0.8009479 -1.4440e-01 8 0.5607456 0.6646944 -0.1039488 9.9966e-01 1.8148e-03 weaklyHypometh 1.0000e+00 1.5919e-02 weaklyHypometh 9.9930e-01 8.8092e-02 insignificant 1.0000e+00 5.9122e-01 insignificant -0.23518005 1.9193e-03 weaklyHypometh 4.3620e-02 weaklyHypometh chr9 131060217 131061217 34693 ENSG00000220992 0.0227211 986 33 0.010691 922 32 0.0083333 1048 35 0.021154 663 27 0.019841 557 32 0.041108 1250 32 0.015593 904 35 0.011698 642 35 0.0126338 816 35 0.0070432 716 33 0.011771 857 35 0.0228679 864 33 0.0346444 751 33 0.056122 43 5 0.0078943 988 33 0.0194458 660 28 0.0036843 619 28 0.0063131 727 30 0.0127270 682 33 0.021770 1085 33 0.022567 392 32 0.0099265 433 23 0.0128670 893 33 0.0144093 441 32 0.024645 564 19 0.0124910 1063 35 0.020812 541 30 0.056351 292 28 0.0159864 428 31 0.0088553 1096 34 0.0082150 1529 35 0.0089807 1230 33 0.0083541 580 32 0.0049749 699 32 0.0629483 281 16 0.011242 398 22 0.064608 440 31 0.0183858 772 34 0.0041098 1255 33 0.0052624 1079 35 0.0015243 785 27 0.0069997 940 33 0.0070497 1063 29 0.0036843 0.0024855 0.0000000 0.0092515 0.0024178 0.022285 0.0092500 0.0082533 0.0060589 0.0086122 0.0112730 0.0243591 0.0058375 NA 0.0074063 0.0146503 0.0056439 0.0058914 0.0095745 0.0144278 0.0216285 0.0067812 0.0130825 0.0179106 0.0032371 0.0036593 0.02881562 0.030473 0.0129640 0.0048702 0.0027391 0.0067391 0.0099482 0.0070025 0.08464731 0.01713863 0.057365 0.0218761 0.0040376 0.0038530 0.0026177 0.0056823 0.0107785 21 0.0107098 0.011459 3.2908e-04 33 0.016982 0.014653 0.00232955 8.3821e-01 9.4926e-01 insignificant 1.000000 1.000000 insignificant 0.56664432 0.96095128 insignificant 1.00000 1.00000 insignificant 0.00039408 0.9353829 insignificant 1.00000 insignificant 0.0107098 0.0302935 -0.01966671 32 0.016982 0.0249776 -0.0079954 3.8922e-01 7.9966e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 3.7019e-01 6.8724e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0100160 4.2638e-01 insignificant 1.0000e+00 insignificant 0.0107098 0.0044904 0.00590511 33 0.016982 0.0050201 0.01196206 6.1431e-02 6.8581e-01 insignificant 7.8758e-01 1.0000e+00 insignificant 1.5811e-01 8.6272e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.3414e-02 2.3920e-04 weaklyHypermeth 0.0195698 weaklyHypermeth 0.011458 0.0302839 -0.01810434 32 0.0142456 0.0242838 -0.01003815 9.3482e-01 7.0958e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6337e-01 9.4430e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0104101 4.1663e-01 insignificant 1.0000e+00 insignificant 0.011459 0.0044904 0.00638750 33 0.0146526 0.0050201 0.00963251 3.0233e-01 9.9430e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.5241e-01 9.8329e-01 insignificant 1.0000e+00 1.00000000 insignificant 1.3020e-02 6.3135e-03 weaklyHypermeth 0.2474446 insignificant 0.0302935 0.0044904 2.7015e-02 32 0.0249776 0.0050201 0.0199575 6.2385e-01 8.8920e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.8011e-01 9.9481e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02342974 9.3548e-02 insignificant 6.1952e-01 insignificant chr9 131135917 131136917 34694 C9orf106 ENSG00000179082 0.0095913 533 14 0.171485 743 14 0.0587026 871 14 0.010256 477 14 0.064200 614 14 0.028599 923 15 0.010715 839 14 0.023097 590 14 0.0080292 768 14 0.0397775 900 14 0.033853 832 14 0.0053289 571 14 0.0086732 639 14 0.079321 369 10 0.0120640 980 14 0.0075255 588 14 0.0365651 294 4 0.0083700 515 14 0.0707619 831 14 0.084667 895 14 0.048948 409 15 0.0591068 179 8 0.0072579 465 14 0.0310176 550 16 0.017189 126 9 0.0017857 928 14 0.060633 779 14 0.068535 434 14 0.0072624 758 14 0.0245465 1146 14 0.0047004 1654 14 0.1628013 922 14 0.0087091 604 14 0.0094992 724 14 0.0333333 546 11 0.019492 75 4 0.148336 386 16 0.0020872 961 14 0.1436553 798 14 0.0507900 717 14 0.0692363 351 14 0.1388373 973 14 0.0923445 510 14 0.0082495 0.0056214 0.0081014 0.0046464 0.0091000 0.006763 0.0114079 0.0058510 0.0075858 0.0094349 0.0035898 0.0043798 0.0055119 0.0079602 0.0114725 0.0070761 0.0192331 0.0140299 0.0052193 0.0024765 0.0067252 0.0190996 0.0098055 0.0129308 0.0203406 0.0019655 0.00082602 0.010971 0.0093998 0.0027688 0.0060617 0.0212150 0.0111681 0.0079688 0.00030976 0.02466817 0.005191 0.0024187 0.0938264 0.0513023 0.0359224 0.0430542 0.0292821 14 0.0093668 0.010299 -9.0320e-04 14 0.101837 0.079283 0.02255479 3.5058e-01 4.9023e-01 insignificant 1.000000 1.000000 insignificant 0.29871918 0.80630612 insignificant 1.00000 1.00000 insignificant -0.00256954 0.8733700 insignificant 1.00000 insignificant 0.0093689 0.0087985 0.00078759 14 0.106929 0.1319197 -0.0249904 2.5023e-01 4.8171e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.4178e-01 9.4723e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0016697 9.4765e-01 insignificant 1.0000e+00 insignificant 0.0092976 0.0653927 -0.05903035 14 0.086241 0.1498949 -0.06365358 9.5883e-01 7.1787e-17 weaklyHypometh 1.0000e+00 7.1787e-14 weaklyHypometh 9.5958e-01 6.3115e-05 weaklyHypometh 1.0000e+00 9.0164e-03 weaklyHypometh -6.0394e-02 2.5749e-02 weaklyHypometh 0.4858297 insignificant 0.010186 0.0087985 0.00129904 14 0.0732468 0.1319197 -0.05867296 8.1017e-01 2.6863e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.2002e-01 8.1388e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0042392 8.7527e-01 insignificant 1.0000e+00 insignificant 0.010068 0.0653927 -0.05390334 14 0.0507861 0.1498949 -0.09910887 9.9834e-01 1.3363e-11 weaklyHypometh 1.0000e+00 1.3363e-08 weaklyHypometh 9.9975e-01 1.6034e-04 weaklyHypometh 1.0000e+00 0.03206865 weaklyHypometh -5.7824e-02 3.3106e-02 weaklyHypometh 0.7242616 insignificant 0.0084977 0.0653927 -5.2952e-02 14 0.0862313 0.1498949 -0.0636637 9.9900e-01 2.7572e-05 weaklyHypometh 1.0000e+00 3.2437e-04 weaklyHypometh 9.9997e-01 4.0856e-03 weaklyHypometh 1.0000e+00 4.6961e-02 weaklyHypometh -0.06206325 6.3440e-02 insignificant 4.7343e-01 insignificant chr9 131202717 131203717 34695 ENSG00000219220 0.8030251 457 21 0.674915 676 24 0.8028406 728 24 0.832106 273 12 0.773920 331 18 0.823461 552 22 0.813691 488 21 0.767998 410 20 0.7330380 487 20 0.7758893 403 20 0.780825 698 22 0.7528201 358 19 0.7520109 603 21 0.820542 75 5 0.7349894 482 21 0.7240626 271 15 0.7273102 254 16 0.7344240 385 15 0.8064701 471 21 0.752683 486 19 0.774030 282 19 0.6789990 185 10 0.7648816 457 21 0.7958082 273 16 0.800448 141 8 0.7858119 674 23 0.736213 428 21 0.752797 230 17 0.8175523 428 21 0.7682885 727 23 0.7838854 965 24 0.8572606 668 22 0.7413222 632 21 0.7823794 497 20 0.7851560 612 20 0.899333 167 10 0.777878 339 21 0.8828587 580 23 0.7883543 450 18 0.8069463 539 18 0.7729016 277 12 0.7730784 370 13 0.8465585 422 14 0.7783236 0.6408607 0.7779271 0.8019703 0.7580953 0.857499 0.8190985 0.7911742 0.7563887 0.8105159 0.7729775 0.7351903 0.6993077 NA 0.7404165 0.7252413 0.7644995 0.7391790 0.7839060 0.7034983 0.7752484 0.7133427 0.7663517 0.7950232 0.8613568 0.7590428 0.75854893 0.789305 0.8184775 0.7452991 0.7790036 0.8377255 0.7913868 0.7405158 0.67782982 0.90938943 0.840435 0.8867922 0.7877399 0.7548074 0.6923376 0.6931397 0.8233415 9 0.7713771 0.790033 -1.9705e-02 23 0.744539 0.756053 -0.01151393 9.8361e-01 5.8149e-02 insignificant 1.000000 1.000000 insignificant 0.99434685 0.07056049 insignificant 1.00000 1.00000 insignificant -0.00698034 0.6608012 insignificant 1.00000 insignificant 0.7713771 0.8358684 -0.05588568 22 0.744539 0.7973482 -0.0528090 3.1891e-01 3.5093e-17 weaklyHypometh 1.0000e+00 1.1698e-14 weaklyHypometh 9.8015e-01 2.2721e-09 weaklyHypometh 1.0000e+00 1.1361e-06 weaklyHypometh -0.0421368 1.7626e-01 insignificant 1.0000e+00 insignificant 0.7713771 0.7740525 0.00491929 16 0.744539 0.7799157 -0.03537647 6.5330e-01 1.1103e-03 inconclusive 1.0000e+00 5.5513e-02 inconclusive 7.4099e-01 1.0066e-02 inconclusive 1.0000e+00 3.8449e-01 insignificant -2.8217e-02 1.2668e-01 insignificant 1.0000000 insignificant 0.790033 0.8358684 -0.03571965 22 0.7560531 0.7973482 -0.04129508 4.9008e-01 3.6371e-12 weaklyHypometh 1.0000e+00 1.8186e-09 weaklyHypometh 9.3563e-01 1.1372e-07 weaklyHypometh 1.0000e+00 5.6861e-05 weaklyHypometh -0.0351565 2.6236e-01 insignificant 1.0000e+00 insignificant 0.790033 0.7740525 0.02277041 16 0.7560531 0.7799157 -0.02386254 3.2048e-01 1.2087e-02 inconclusive 1.0000e+00 4.8347e-01 insignificant 2.8466e-01 9.7937e-02 insignificant 1.0000e+00 1.00000000 insignificant -2.1237e-02 2.8055e-01 insignificant 1.0000000 insignificant 0.8358684 0.7740525 4.3039e-02 16 0.7973482 0.7799157 0.0174325 6.0049e-03 8.1641e-01 weaklyHypermeth 5.0041e-01 1.0000e+00 insignificant 7.9573e-02 9.8332e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01391993 6.5034e-01 insignificant 1.0000e+00 insignificant chr9 131215317 131216317 34697 ENSG00000219220 0.0258373 2769 78 0.013855 2718 86 0.0164601 3373 86 0.024899 2616 60 0.011084 2526 82 0.052612 3842 83 0.016136 3509 82 0.023080 2486 81 0.0363945 4199 81 0.0163341 4491 79 0.038061 3099 81 0.0181838 4338 79 0.0320989 3610 82 0.012403 1609 47 0.0131551 4013 81 0.0105678 3800 81 0.0247450 3108 75 0.0213280 3038 65 0.0110986 2056 74 0.043109 3011 86 0.022020 1000 72 0.0234571 1821 60 0.0194572 2254 81 0.0314732 1686 77 0.034185 1331 47 0.0080168 3534 86 0.070307 1912 79 0.060470 1754 77 0.0276557 1897 75 0.0220258 3856 86 0.0107622 4262 86 0.0349295 3474 81 0.0068194 2211 81 0.0088519 2057 76 0.0190599 2348 63 0.012192 969 58 0.049782 1565 80 0.0083642 2814 86 0.0346662 3578 75 0.0233712 3175 75 0.0160849 2350 60 0.0086659 2584 64 0.0450824 2933 71 0.0151508 0.0128217 0.0149900 0.0158487 0.0148442 0.035604 0.0126596 0.0162402 0.0084510 0.0115079 0.0209314 0.0139740 0.0126714 0.0123708 0.0091788 0.0109034 0.0152615 0.0107824 0.0103254 0.0272963 0.0278068 0.0173103 0.0206537 0.0140065 0.0123616 0.0108521 0.03886686 0.031411 0.0198314 0.0086388 0.0072639 0.0237355 0.0057670 0.0058222 0.00824948 0.00587021 0.044459 0.0087657 0.0153544 0.0121512 0.0130236 0.0083848 0.0235802 54 0.0172717 0.020048 -2.4273e-03 81 0.028881 0.037059 -0.00817790 6.2662e-01 6.9482e-02 insignificant 1.000000 1.000000 insignificant 0.38757850 0.56524151 insignificant 1.00000 1.00000 insignificant -0.00732459 0.2351157 insignificant 1.00000 insignificant 0.0172591 0.0131227 0.00388727 76 0.025138 0.0182847 0.0068535 3.7633e-04 9.9565e-01 weaklyHypermeth 2.7877e-03 1.0000e+00 weaklyHypermeth 7.6195e-04 9.9982e-01 weaklyHypermeth 7.8552e-03 1.0000e+00 weaklyHypermeth 0.0055606 4.6664e-01 insignificant 1.0000e+00 insignificant 0.0172336 0.0135431 -0.00035735 75 0.022924 0.0398745 -0.01695082 4.3219e-01 2.0441e-03 weaklyHypometh 1.0000e+00 7.8618e-02 weaklyHypometh 2.6599e-01 6.9443e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -2.5020e-03 7.3491e-01 insignificant 1.0000000 insignificant 0.020026 0.0131227 0.00652542 80 0.0337465 0.0182847 0.01546179 5.3829e-02 1.0000e+00 insignificant 3.0585e-01 1.0000e+00 insignificant 3.0519e-01 1.0000e+00 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0128852 1.5940e-01 insignificant 9.3218e-01 insignificant 0.019875 0.0135431 0.00164136 75 0.0268250 0.0398745 -0.01304946 5.8753e-01 5.4374e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.9308e-01 8.9672e-01 insignificant 1.0000e+00 1.00000000 insignificant 4.8226e-03 5.7894e-01 insignificant 1.0000000 insignificant 0.0131326 0.0135431 -4.5301e-03 75 0.0193005 0.0398745 -0.0205739 1.0000e+00 6.3325e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.0000e+00 9.1114e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00806261 4.1005e-01 insignificant 1.0000e+00 insignificant chr9 131215417 131216417 34698 ENSG00000219220 0.0251369 2744 72 0.013031 2351 77 0.0185239 2920 77 0.011514 2611 60 0.011107 2055 71 0.035879 3662 74 0.014036 2810 71 0.022677 2304 70 0.0388172 3884 70 0.0174242 4120 70 0.039463 2451 70 0.0173413 3758 70 0.0298621 3329 71 0.011203 1629 46 0.0123963 3587 70 0.0063589 3178 70 0.0254886 2395 66 0.0228542 3072 59 0.0074028 1741 65 0.033165 2863 77 0.024284 887 62 0.0157756 1899 61 0.0213772 2031 72 0.0260748 1583 66 0.026961 1310 46 0.0078782 3180 77 0.067064 1865 69 0.052230 1702 68 0.0284488 1734 65 0.0232865 3303 77 0.0106961 3714 77 0.0312616 3308 72 0.0054577 1955 72 0.0074588 1690 65 0.0056112 2192 57 0.003871 935 53 0.048048 1304 70 0.0089296 2499 77 0.0284541 3528 67 0.0222077 2938 67 0.0119070 2274 60 0.0098128 2643 59 0.0359627 2835 65 0.0121768 0.0122190 0.0158862 0.0120682 0.0150357 0.027837 0.0130239 0.0157777 0.0086828 0.0120916 0.0201829 0.0143865 0.0116405 0.0102231 0.0100488 0.0074257 0.0157756 0.0124432 0.0068901 0.0218797 0.0275033 0.0135492 0.0229391 0.0110834 0.0096549 0.0105187 0.03530690 0.026449 0.0232510 0.0091351 0.0070251 0.0213265 0.0055849 0.0051390 0.00594856 0.00250667 0.041035 0.0086202 0.0124681 0.0113568 0.0109012 0.0084475 0.0210057 54 0.0146184 0.018781 -2.8566e-03 72 0.029491 0.037805 -0.00831406 9.3290e-01 8.1137e-02 insignificant 1.000000 1.000000 insignificant 0.80459519 0.62379132 insignificant 1.00000 1.00000 insignificant -0.00726085 0.1931067 insignificant 1.00000 insignificant 0.0146037 0.0115366 0.00291958 67 0.025392 0.0176782 0.0077136 3.4649e-04 9.6974e-01 weaklyHypermeth 2.6113e-03 1.0000e+00 weaklyHypermeth 3.1010e-03 9.9896e-01 weaklyHypermeth 2.7688e-02 1.0000e+00 weaklyHypermeth 0.0074546 3.5030e-01 insignificant 1.0000e+00 insignificant 0.0145743 0.0125897 0.00062676 67 0.022947 0.0375179 -0.01457098 4.4888e-02 6.4995e-02 weaklyHypermeth 6.0659e-01 8.5520e-01 insignificant 1.1970e-01 7.5314e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -9.8489e-04 8.6266e-01 insignificant 1.0000000 insignificant 0.018756 0.0115366 0.00619174 71 0.0341893 0.0176782 0.01651108 4.4880e-02 1.0000e+00 weaklyHypermeth 2.6245e-01 1.0000e+00 insignificant 2.9347e-01 1.0000e+00 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0147154 1.1445e-01 insignificant 7.2435e-01 insignificant 0.018591 0.0125897 0.00291492 67 0.0265261 0.0375179 -0.01099181 1.1204e-01 9.1003e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.1083e-01 9.8025e-01 insignificant 1.0000e+00 1.00000000 insignificant 6.2760e-03 3.8135e-01 insignificant 1.0000000 insignificant 0.0115465 0.0125897 -3.4635e-03 67 0.0187694 0.0375179 -0.0187484 1.0000e+00 9.0185e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.0000e+00 9.7088e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00843947 3.5140e-01 insignificant 1.0000e+00 insignificant chr9 131238417 131239417 34700 ENSG00000219220 0.0505828 717 15 0.072716 841 26 0.0561703 685 15 0.053131 780 22 0.011252 412 11 0.058146 770 26 0.024374 572 11 0.013184 449 11 0.0141914 499 11 0.0094877 380 11 0.018446 731 22 0.0439891 371 11 0.0351671 378 11 0.022792 137 7 0.0199468 408 11 0.0062112 358 11 0.0088889 226 5 0.0589750 1021 14 0.0371946 516 11 0.062391 624 15 0.093815 293 11 0.0580223 182 3 0.3046979 484 15 0.0106735 263 11 0.109774 1019 7 0.0443849 1046 26 0.018383 323 11 0.027840 197 11 0.0178682 532 11 0.0368332 1016 26 0.1277910 1508 26 0.0665761 798 26 0.0399880 823 26 0.0033259 479 11 0.0370347 880 12 0.000000 285 8 0.028862 299 9 0.0401349 990 26 0.0476909 762 26 0.0502372 746 26 0.1529614 636 18 0.1365685 538 15 0.0520052 703 23 0.0542736 0.0899689 0.0552156 0.0484888 0.0366688 0.067638 0.0468501 0.0529905 0.0452417 0.0287774 0.0610590 0.0715925 0.1175427 0.0648275 0.0348370 0.0224627 0.0562370 0.0478373 0.1400937 0.0212866 0.0925048 0.0597461 0.0727835 0.0289729 0.0598242 0.0314132 0.03482380 0.022661 0.0648702 0.0046062 0.0790205 0.0724278 0.0163794 0.0060358 0.00000000 0.00000000 0.031349 0.0077058 0.0805398 0.0549659 0.0345611 0.0772427 0.0539427 7 0.0653793 0.071028 2.7639e-03 15 0.046080 0.080905 -0.03482530 9.9839e-01 9.9526e-01 insignificant 1.000000 1.000000 insignificant 0.99999125 0.80219647 insignificant 1.00000 1.00000 insignificant -0.04252638 0.1012879 insignificant 1.00000 insignificant 0.0654034 0.0559254 0.03523616 15 0.052662 0.0388676 0.0137949 8.6649e-02 1.0000e+00 insignificant 4.5173e-01 1.0000e+00 insignificant 1.0285e-01 1.0000e+00 insignificant 6.3488e-01 1.0000e+00 insignificant 0.0089709 3.4081e-01 insignificant 1.0000e+00 insignificant 0.0654034 0.0784488 -0.00713216 15 0.052662 0.0533312 -0.00066877 9.6733e-01 9.3527e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.2959e-01 9.9945e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -5.4031e-02 8.0986e-02 insignificant 0.9453422 insignificant 0.070943 0.0559254 0.02854152 15 0.0567485 0.0388676 0.01788091 9.0914e-02 1.0000e+00 insignificant 4.8617e-01 1.0000e+00 insignificant 5.0548e-02 1.0000e+00 insignificant 3.4622e-01 1.0000e+00 insignificant 0.0514973 5.6764e-02 insignificant 4.0792e-01 insignificant 0.070943 0.0784488 -0.00972201 15 0.0567485 0.0533312 0.00341728 9.4899e-01 9.9811e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.0175e-01 1.0000e+00 insignificant 1.0000e+00 1.00000000 insignificant -1.1504e-02 7.3444e-01 insignificant 1.0000000 insignificant 0.0559254 0.0784488 -3.8453e-02 15 0.0388676 0.0533312 -0.0144636 1.0000e+00 1.5823e-01 insignificant 1.0000e+00 8.2213e-01 insignificant 1.0000e+00 9.4632e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.06300166 5.1934e-02 insignificant 4.0893e-01 insignificant chr9 131260817 131261817 34702 ENSG00000219220 0.2842807 206 9 0.342426 284 9 0.3183369 305 9 0.192915 209 6 0.286926 174 9 0.300788 310 9 0.237153 388 9 0.497042 333 9 0.3618897 400 9 0.3144103 499 9 0.297939 389 9 0.2767382 322 9 0.4410982 568 9 0.368993 264 5 0.3958805 357 9 0.3407644 179 9 0.3643098 126 9 0.3330437 269 9 0.3060002 291 9 0.306371 251 9 0.330802 121 6 0.2911953 113 6 0.2393944 284 9 0.1839640 183 9 0.306763 105 5 0.4184932 426 9 0.263726 187 9 0.179301 180 9 0.5119034 225 9 0.3488303 437 9 0.3099939 559 9 0.1768513 367 9 0.3846300 316 9 0.3029011 249 9 0.2000000 68 3 0.354434 94 6 0.473587 162 7 0.3420272 321 9 0.3060019 163 9 0.4027270 217 9 0.3391797 158 6 0.3758880 175 9 0.2797757 206 8 0.4071253 0.3674647 0.4235192 0.3017650 0.3742449 0.450466 0.3057069 0.5248505 0.4184420 0.3570243 0.3321894 0.3020916 0.4720642 0.3849933 0.4726092 0.3459510 0.3634262 0.3470499 0.3209254 0.2747170 0.3498559 0.4000277 0.3101891 0.2509589 0.3931418 0.4776576 0.37051594 0.271137 0.5578614 0.4093346 0.4382140 0.2244499 0.3848342 0.3050284 0.51743812 0.46033027 0.583616 0.3068576 0.4334965 0.4810547 0.4611746 0.4367656 0.3451508 6 0.3804703 0.349545 1.1073e-02 9 0.297169 0.316174 -0.01900444 3.3323e-01 9.1774e-01 insignificant 1.000000 1.000000 insignificant 0.17115549 0.95699429 insignificant 1.00000 1.00000 insignificant 0.03159717 0.3463075 insignificant 1.00000 insignificant 0.3804703 0.3454545 0.02724658 9 0.297169 0.3226772 -0.0255079 5.7594e-03 2.2562e-02 weaklyHypermeth 3.7157e-02 8.6775e-01 weaklyHypermeth 2.6923e-01 5.2158e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0145646 7.2630e-01 insignificant 1.0000e+00 insignificant 0.3805946 0.4504897 -0.04732475 9 0.326886 0.3199434 0.00694290 9.3041e-02 1.2016e-02 weaklyHypometh 1.0000e+00 2.8784e-01 insignificant 2.2152e-01 4.0516e-02 weaklyHypometh 1.0000e+00 8.1529e-01 insignificant -1.2349e-02 6.5895e-01 insignificant 1.0000000 insignificant 0.349545 0.3454545 0.01769992 9 0.3161738 0.3226772 -0.00650345 4.9793e-02 8.2551e-03 weaklyHypermeth 2.8453e-01 5.1143e-01 insignificant 5.8489e-01 1.1720e-02 inconclusive 1.0000e+00 1.0000e+00 insignificant -0.0461617 3.4633e-01 insignificant 1.0000e+00 insignificant 0.349356 0.4504897 -0.04606574 9 0.2977912 0.3199434 -0.02215223 4.9300e-01 6.4379e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 7.9893e-01 5.9167e-02 insignificant 1.0000e+00 1.00000000 insignificant -4.3946e-02 2.4925e-01 insignificant 1.0000000 insignificant 0.3466003 0.4504897 -5.3457e-02 9 0.3549450 0.3199434 0.0350016 3.1824e-01 1.4201e-01 insignificant 1.0000e+00 7.5943e-01 insignificant 2.5500e-01 4.2363e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00221537 9.6036e-01 insignificant 1.0000e+00 insignificant chr9 131282317 131283317 34706 ENSG00000219220 0.7774648 231 6 0.665131 434 6 0.7713287 181 6 0.721009 168 5 0.834762 124 6 0.881808 367 6 0.846524 226 6 0.775035 167 6 0.8189228 161 6 0.7864802 97 6 0.822146 487 6 0.8231818 92 5 0.8319304 144 6 0.833891 83 5 0.6396079 154 6 0.8333333 51 5 0.3229167 13 1 0.6383026 274 5 0.8330338 485 6 0.828345 390 6 0.812701 158 6 0.7106481 44 5 0.8497853 218 6 0.7510823 231 6 0.866667 31 5 0.8618871 387 5 0.707286 102 6 0.782191 137 5 0.8385441 409 5 0.8171086 359 6 0.8671475 530 6 0.8148977 311 6 0.5581205 277 6 0.5497253 135 6 0.4186148 206 5 0.750000 4 0 0.477039 332 6 0.6289770 380 6 0.8506691 255 5 0.7837104 216 5 0.7248186 131 5 0.6007576 153 5 0.8717838 128 5 0.7726660 0.6746330 0.7661334 0.8500449 0.8725853 0.869602 0.8626055 0.7933259 0.8257783 0.7813260 0.8381319 0.7856730 0.8183022 0.8240813 0.8621619 0.8838136 0.4391977 0.6609515 0.8650842 0.8655679 0.8052212 0.6855627 0.8642895 0.7016779 0.8664536 0.8422443 0.70912182 0.822677 0.8789345 0.8183952 0.8760634 0.8317946 0.4845032 0.6365137 0.43529911 0.69378420 0.417173 0.6932744 0.8866694 0.8158248 0.7320853 0.7158798 0.8552217 5 0.8048048 0.825789 -2.0793e-02 6 0.600893 0.866789 -0.26589557 9.8970e-01 3.6224e-01 insignificant 1.000000 1.000000 insignificant 0.89218381 0.33834657 insignificant 1.00000 1.00000 insignificant -0.04240447 0.2023291 insignificant 1.00000 insignificant 0.8051768 0.4917541 0.30552984 6 0.801191 0.5308703 0.2703204 1.7991e-18 1.0000e+00 hypermethylated 3.4598e-17 1.0000e+00 hypermethylated 7.0359e-05 9.9902e-01 hypermethylated 8.4770e-04 1.0000e+00 hypermethylated 0.2005116 5.6559e-03 lowCoverage 6.0169e-02 lowCoverage 0.8051768 0.7768969 0.02652649 5 0.801191 0.7882414 0.01294937 1.8726e-01 1.6997e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.5611e-01 1.2050e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -2.0902e-03 9.7142e-01 insignificant 1.0000000 insignificant 0.825669 0.4917541 0.33428750 6 0.8223848 0.5308703 0.29151448 3.0504e-15 1.0000e+00 hypermethylated 5.8661e-14 1.0000e+00 hypermethylated 9.9036e-05 9.9983e-01 hypermethylated 1.2227e-03 1.0000e+00 hypermethylated 0.2429161 2.6152e-03 lowCoverage 3.3964e-02 lowCoverage 0.825669 0.7768969 0.04875672 5 0.8223848 0.7882414 0.03414347 4.7442e-02 2.8182e-01 weaklyHypermeth 5.9303e-01 1.0000e+00 insignificant 1.5358e-01 2.1091e-01 insignificant 1.0000e+00 1.00000000 insignificant 4.0314e-02 4.6996e-01 insignificant 1.0000000 insignificant 0.4917541 0.7768969 -2.8048e-01 5 0.5308703 0.7882414 -0.2573710 9.9997e-01 9.2112e-07 hypomethylated 1.0000e+00 1.3350e-05 hypomethylated 9.9351e-01 1.2850e-02 weaklyHypometh 1.0000e+00 1.2476e-01 insignificant -0.20260183 1.5938e-02 lowCoverage 1.8750e-01 lowCoverage chr9 131297817 131298817 34707 ENSG00000204054 0.0129131 1699 32 0.043148 1072 31 0.0203282 1184 32 0.049327 1502 32 0.051246 916 36 0.145422 2154 32 0.007325 1225 32 0.011029 1102 32 0.0172270 1440 32 0.0491808 1240 32 0.082553 1177 31 0.0179827 919 32 0.0388579 1332 32 0.046152 745 23 0.0642448 1230 32 0.0046569 833 28 0.0200014 356 16 0.0891854 2854 32 0.0664607 1158 31 0.046782 1750 32 0.021672 597 30 0.0136687 864 31 0.0990016 1070 32 0.0086898 702 29 0.109731 909 31 0.0377828 1739 32 0.105900 1395 30 0.063181 694 25 0.1073796 1170 31 0.1433141 1744 32 0.0554787 2349 32 0.0293549 1840 32 0.0565565 941 31 0.0188261 837 32 0.0155166 1010 25 0.034435 254 14 0.065948 870 35 0.1044923 1487 28 0.0349709 1709 32 0.0821548 1608 32 0.0200356 1296 32 0.0544742 1684 31 0.0521779 1284 32 0.0137183 0.0067479 0.0160441 0.0094585 0.0189067 0.017308 0.0112632 0.0140672 0.0125985 0.0145770 0.0186741 0.0163566 0.0103382 0.0189383 0.0227956 0.0043879 0.0219572 0.0223726 0.0156902 0.0129812 0.0198387 0.0101496 0.0224881 0.0079488 0.0255285 0.0055040 0.01373086 0.010153 0.0138563 0.0089489 0.0136868 0.0250327 0.0119828 0.0178517 0.00424638 0.01650257 0.014838 0.0259212 0.0189996 0.0255878 0.0090771 0.0096462 0.0155212 26 0.0166583 0.018457 1.1107e-03 32 0.097828 0.112894 -0.01506645 9.8552e-01 9.8491e-01 insignificant 1.000000 1.000000 insignificant 0.97327108 0.99848940 insignificant 1.00000 1.00000 insignificant -0.02206178 0.1619660 insignificant 1.00000 insignificant 0.0165145 0.0166728 0.00131887 30 0.091042 0.0756860 0.0153560 1.5849e-01 8.8205e-01 insignificant 7.8072e-01 1.0000e+00 insignificant 1.4939e-01 9.9996e-01 insignificant 8.7874e-01 1.0000e+00 insignificant -0.0050948 7.5409e-01 insignificant 1.0000e+00 insignificant 0.0163439 0.0205859 -0.00414808 32 0.067290 0.0546254 0.01266496 8.9481e-01 3.2550e-03 weaklyHypometh 1.0000e+00 1.0172e-01 insignificant 9.5456e-01 5.4953e-02 insignificant 1.0000e+00 9.7401e-01 insignificant -4.5616e-03 7.3270e-01 insignificant 1.0000000 insignificant 0.018143 0.0166728 0.00073231 30 0.1046848 0.0756860 0.02899886 2.8319e-01 9.6276e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.2465e-01 9.9992e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0169670 3.8691e-01 insignificant 1.0000e+00 insignificant 0.017719 0.0204566 -0.00649277 32 0.0807460 0.0424302 0.03831577 9.8799e-01 5.8245e-03 weaklyHypometh 1.0000e+00 3.0570e-01 insignificant 9.6936e-01 6.4058e-02 insignificant 1.0000e+00 1.00000000 insignificant 1.7500e-02 3.1295e-01 insignificant 1.0000000 insignificant 0.0158582 0.0206049 -3.2273e-03 30 0.0499890 0.0605308 -0.0105418 9.9999e-01 8.0194e-02 insignificant 1.0000e+00 4.7735e-01 insignificant 1.0000e+00 7.7558e-02 insignificant 1.0000e+00 5.4236e-01 insignificant 0.00053313 9.7604e-01 insignificant 1.0000e+00 insignificant chr9 131325417 131326417 34708 ENSG00000204054 0.8781736 92 6 0.694378 112 5 0.7156954 94 6 0.955315 82 5 0.972449 47 4 0.928102 138 6 0.639340 67 3 0.807823 99 7 0.8043274 99 4 0.9041126 78 5 0.822171 212 7 0.7582457 60 5 0.8227188 157 7 0.955556 21 1 0.7314471 101 6 0.6388889 33 3 0.5744048 40 2 0.8814080 143 6 0.7964320 96 5 0.846877 114 6 0.850959 51 5 0.7484127 37 5 0.7956349 91 6 0.7891156 40 3 0.785714 30 3 0.8991752 122 6 0.834127 85 6 0.822917 36 4 0.8495301 110 6 0.7957158 165 6 0.8683608 206 6 0.8070415 177 6 0.6872352 130 5 0.6784892 88 5 0.9924242 58 2 0.373333 34 2 0.751746 103 6 0.8386813 177 6 0.7726950 99 6 0.7592276 179 6 0.6584824 93 6 0.6127403 103 6 0.8793863 96 6 0.8401810 0.7118822 0.7471396 0.9350649 0.9621878 0.918276 0.6807189 0.8539627 0.7902538 0.8988345 0.8403324 0.8108508 0.7976453 0.8164778 0.7934792 0.7786576 0.7003205 0.8724742 0.7530358 0.8219651 0.7667181 0.7703297 0.7807622 0.7818848 0.8231768 0.8861255 0.88290598 0.783217 0.8542311 0.8696751 0.8558133 0.7694767 0.6630770 0.6800850 0.91617529 0.60512821 0.740488 0.8538999 0.8135992 0.7385496 0.6458285 0.7696816 0.8944184 2 0.8238727 0.816362 -1.3725e-02 6 0.816785 0.840413 -0.02362771 7.3335e-01 1.4610e-01 insignificant 1.000000 1.000000 insignificant 0.77253616 0.13748352 insignificant 1.00000 1.00000 insignificant -0.01416530 0.6202848 lowCoverage 1.00000 lowCoverage 0.8238727 0.6694915 0.09888621 4 0.816785 0.7490978 0.0676872 1.0885e-02 9.6828e-02 lowCoverage 6.6779e-02 1.0000e+00 lowCoverage 1.1432e-01 5.3823e-02 lowCoverage 6.9284e-01 1.0000e+00 lowCoverage 0.0860750 3.6563e-01 lowCoverage 1.0000e+00 lowCoverage 0.8238727 0.7807018 0.05746632 6 0.816785 0.7093213 0.10746376 9.3537e-04 9.8668e-01 weaklyHypermeth 2.2271e-02 1.0000e+00 weaklyHypermeth 6.0487e-02 9.6582e-01 insignificant 9.7559e-01 1.0000e+00 insignificant 6.9887e-02 2.3295e-01 lowCoverage 1.0000000 lowCoverage 0.816362 0.6694915 0.11776391 4 0.8404127 0.7490978 0.09131492 3.1968e-02 6.2924e-01 lowCoverage 1.9142e-01 1.0000e+00 lowCoverage 5.9408e-02 5.5298e-01 lowCoverage 3.9871e-01 1.0000e+00 lowCoverage 0.1002403 2.8925e-01 lowCoverage 1.0000e+00 lowCoverage 0.816362 0.7807018 0.07199415 6 0.8404127 0.7093213 0.13109147 2.1546e-03 9.9958e-01 weaklyHypermeth 4.4888e-02 1.0000e+00 weaklyHypermeth 1.6566e-02 9.9562e-01 weaklyHypermeth 3.7650e-01 1.00000000 insignificant 8.4052e-02 1.4782e-01 insignificant 1.0000000 insignificant 0.6694915 0.7807018 -4.2097e-02 4 0.7490978 0.7093213 0.0397766 1.8551e-02 7.5011e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 2.9068e-02 8.2672e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.01618804 8.7076e-01 lowCoverage 1.0000e+00 lowCoverage chr9 131370317 131371317 34710 ENSG00000204054 0.0393240 1097 41 0.062008 1602 52 0.0137636 1998 51 0.071201 1175 36 0.034199 1341 47 0.103411 2245 48 0.012108 1857 46 0.077223 1608 48 0.0453439 2233 48 0.0131151 2164 47 0.064208 1879 47 0.0103312 2051 49 0.0154469 1933 47 0.052532 923 22 0.0268964 2434 46 0.0047890 1975 47 0.0077276 1238 40 0.0210592 1296 35 0.0311259 1495 48 0.117278 1762 47 0.027089 644 48 0.0636794 943 30 0.0637661 1267 50 0.0230707 1051 49 0.057085 635 26 0.0245254 2099 51 0.051328 1312 40 0.043819 1072 48 0.0364392 1222 47 0.0258509 2107 50 0.0744771 2724 50 0.1141317 1978 50 0.0082335 1453 49 0.0138227 1001 45 0.1206841 549 30 0.076795 259 21 0.113861 1036 46 0.0115417 1435 51 0.0382893 1350 38 0.0513029 1197 42 0.0262097 993 28 0.0266491 1011 31 0.0634044 993 38 0.0421098 0.0072750 0.0217092 0.0380461 0.0225202 0.053496 0.0215841 0.0162906 0.0134022 0.0134350 0.0224368 0.0176120 0.0180292 0.0515096 0.0131380 0.0069872 0.0087622 0.0311132 0.0154436 0.0405491 0.0446868 0.0265720 0.0322650 0.0331449 0.0201925 0.0081028 0.01852877 0.031723 0.0295640 0.0167195 0.0124564 0.0307646 0.0130749 0.0167799 0.04929281 0.03096316 0.035791 0.0138860 0.0221984 0.0185388 0.0226491 0.0141148 0.0294826 27 0.0214831 0.023162 6.0583e-04 50 0.072322 0.048997 0.02332495 5.3376e-02 9.9399e-01 insignificant 1.000000 1.000000 insignificant 0.48612768 0.99267868 insignificant 1.00000 1.00000 insignificant -0.00928386 0.3891722 insignificant 1.00000 insignificant 0.0214050 0.0272109 -0.00217770 46 0.063202 0.1052127 -0.0420108 5.9254e-01 8.1113e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 6.7661e-01 2.1606e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0163351 4.9968e-01 insignificant 1.0000e+00 insignificant 0.0214058 0.0229076 0.00183327 34 0.080068 0.0709796 0.00908866 2.7153e-01 9.9651e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.4568e-01 9.9998e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -1.6542e-05 9.9874e-01 insignificant 1.0000000 insignificant 0.022898 0.0272109 -0.00305798 47 0.0422925 0.1052127 -0.06292014 9.9323e-01 6.1094e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9313e-01 5.4322e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0070513 7.6833e-01 insignificant 1.0000e+00 insignificant 0.022622 0.0229076 0.00064330 34 0.0441088 0.0709796 -0.02687083 9.7435e-01 9.3087e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6035e-01 9.9311e-01 insignificant 1.0000e+00 1.00000000 insignificant 9.2673e-03 3.9658e-01 insignificant 1.0000000 insignificant 0.0264356 0.0227355 4.8083e-04 31 0.0629347 0.0573599 0.0055748 7.2701e-01 9.9526e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6533e-01 9.9995e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01631861 5.0008e-01 insignificant 1.0000e+00 insignificant chr9 131412117 131413117 34715 METTL11A ENSG00000148335 0.0261520 1004 31 0.103007 1107 35 0.0878987 1276 35 0.065322 819 28 0.076803 1244 36 0.130787 1728 33 0.054424 1448 35 0.065324 1296 34 0.0767953 1254 34 0.0312762 1734 36 0.009910 1325 34 0.0087415 1097 35 0.0970269 1209 34 0.050645 962 29 0.0499738 1575 34 0.0044951 1318 34 0.0351967 154 13 0.1005656 1454 29 0.0960470 1764 29 0.034186 1237 34 0.030724 762 36 0.0510699 497 29 0.1214358 831 33 0.0460823 712 35 0.089073 655 30 0.0400293 1654 35 0.057179 1514 34 0.053857 855 34 0.0817670 1564 33 0.0500765 1584 34 0.1115969 2250 35 0.0445417 1114 34 0.0974973 829 35 0.0252355 1239 33 0.0716180 528 19 0.041667 215 11 0.036665 749 38 0.0651073 1424 35 0.0515024 1216 29 0.0750394 1213 32 0.0479186 770 27 0.0844344 1700 24 0.0416384 863 28 0.0077648 0.0053957 0.0094284 0.0140592 0.0065362 0.019340 0.0112914 0.0109112 0.0047580 0.0112248 0.0110176 0.0158920 0.0086875 0.0114615 0.0063775 0.0054899 0.0126812 0.0011914 0.0042830 0.0088401 0.0168659 0.0022266 0.0134154 0.0084933 0.0038151 0.0064459 0.01141864 0.013009 0.0197339 0.0016362 0.0058113 0.0150238 0.0042114 0.0091031 0.01213821 0.00069879 0.014761 0.0074525 0.0078129 0.0049563 0.0061611 0.0155065 0.0022572 24 0.0125660 0.014367 -2.5029e-04 34 0.106963 0.094412 0.01255060 9.9538e-01 9.9656e-01 insignificant 1.000000 1.000000 insignificant 0.99976950 0.99582776 insignificant 1.00000 1.00000 insignificant -0.00455729 0.6979796 insignificant 1.00000 insignificant 0.0124174 0.0158539 -0.00092772 34 0.100533 0.0805622 0.0199706 8.1724e-01 9.7369e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8103e-01 1.0000e+00 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0039305 7.7681e-01 insignificant 1.0000e+00 insignificant 0.0114688 0.0071156 0.00224268 28 0.057070 0.1009052 -0.04383496 3.7239e-01 9.9962e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.2897e-01 9.9994e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.2214e-04 9.9171e-01 insignificant 1.0000000 insignificant 0.014238 0.0158603 0.00014146 34 0.0837520 0.0832036 0.00054841 9.9484e-01 9.9510e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8255e-01 1.0000e+00 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0084878 5.5091e-01 insignificant 1.0000e+00 insignificant 0.013730 0.0069444 0.00227194 28 0.0596132 0.0835533 -0.02394009 3.9637e-01 9.9914e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.8939e-01 1.0000e+00 insignificant 1.0000e+00 1.00000000 insignificant 4.6794e-03 6.9957e-01 insignificant 1.0000000 insignificant 0.0147743 0.0071156 2.3725e-03 28 0.0499344 0.1009052 -0.0509709 9.5037e-01 9.9871e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9992e-01 1.0000e+00 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00380837 7.8766e-01 insignificant 1.0000e+00 insignificant chr9 131485417 131486417 34716 PRRX2 ENSG00000167157 0.7257661 160 8 0.710950 95 7 0.6111111 70 8 0.700516 151 7 0.657353 81 5 0.658706 73 7 0.572015 96 8 0.787337 111 7 0.6717949 74 4 0.5961905 74 8 0.737935 144 7 0.2651852 58 4 0.8217172 87 8 0.733947 65 8 0.5856044 87 8 0.8100000 49 4 0.7826087 29 1 0.7756510 194 5 0.8779762 30 3 0.770833 49 5 0.533333 21 1 0.6111111 22 1 0.7397170 80 4 0.7833333 36 5 0.529071 112 3 0.8476190 63 7 0.723611 47 6 0.676667 37 3 0.7160317 104 7 0.7470238 84 7 0.6561450 90 7 0.5236763 89 7 0.6214286 100 8 0.7785714 74 7 0.6832921 98 8 0.666667 3 0 0.769016 57 3 0.6702512 112 7 0.8011600 138 7 0.8507246 99 7 0.8866672 164 3 0.7333333 61 3 0.8409774 110 7 0.7701058 0.7086031 0.6237113 0.6990479 0.7767645 0.829730 0.6735206 0.6755357 0.8149617 0.7805596 0.6751905 0.3788660 0.8552952 0.7858984 0.7435142 0.8309278 0.7436638 0.7652251 0.8487973 0.6829897 0.5972082 0.7628866 0.8232624 0.8721649 0.6915748 0.8023564 0.83932002 0.841924 0.7136312 0.7332679 0.6860321 0.6393792 0.7554246 0.6855670 0.68748442 0.68687776 0.671692 0.7093440 0.7802476 0.8101748 0.8723111 0.7450172 0.8615482 0 0.7400113 0.740127 -2.8850e-03 7 0.717798 0.554633 0.16316500 9.5727e-01 8.5535e-01 insignificant 1.000000 1.000000 insignificant 0.87426529 0.48144842 insignificant 1.00000 1.00000 insignificant 0.01871488 0.6625131 lowCoverage 1.00000 lowCoverage 0.7396951 0.7094595 0.02404476 7 0.676697 0.6795680 -0.0028706 1.7243e-01 8.0932e-01 insignificant 8.3702e-01 1.0000e+00 insignificant 3.6297e-01 6.4263e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0055446 8.8799e-01 insignificant 1.0000e+00 insignificant 0.7396951 0.8216783 -0.08431541 7 0.676697 0.8398544 -0.16315703 9.9998e-01 6.9418e-04 weaklyHypometh 1.0000e+00 4.1226e-02 weaklyHypometh 9.9996e-01 1.4228e-03 weaklyHypometh 1.0000e+00 7.9045e-02 weaklyHypometh -1.2991e-01 4.6933e-03 weaklyHypometh 0.1417597 insignificant 0.743261 0.7094595 0.03250081 7 0.6819499 0.6795680 0.00238187 9.0169e-02 8.2324e-01 insignificant 4.8478e-01 1.0000e+00 insignificant 1.0054e-01 6.9998e-01 insignificant 6.2060e-01 1.0000e+00 insignificant -0.0242594 5.5087e-01 lowCoverage 1.0000e+00 lowCoverage 0.743261 0.8216783 -0.08019557 7 0.6819499 0.8398544 -0.15790453 9.9900e-01 1.4427e-03 weaklyHypometh 1.0000e+00 1.1098e-01 insignificant 9.9243e-01 1.6333e-02 weaklyHypometh 1.0000e+00 0.90738172 insignificant -1.4863e-01 2.5932e-03 lowCoverage 0.1595513 lowCoverage 0.7094595 0.8216783 -1.1215e-01 7 0.6795680 0.8398544 -0.1602864 9.9984e-01 6.1458e-04 weaklyHypometh 1.0000e+00 6.0253e-03 weaklyHypometh 9.9996e-01 4.0580e-03 weaklyHypometh 1.0000e+00 4.6961e-02 weaklyHypometh -0.12436813 7.9485e-03 weaklyHypometh 1.1954e-01 insignificant chr9 131578617 131579617 34724 PTGES ENSG00000148344 0.7743288 143 7 0.442213 250 7 0.5019201 203 4 0.756151 151 7 0.614966 126 4 0.849449 208 7 0.645290 167 5 0.610705 158 4 0.6887755 95 4 0.8829668 212 4 0.752813 191 7 0.5738304 67 3 0.3307692 168 4 0.880612 97 4 0.6191411 234 4 0.6269841 120 4 0.0000000 3 0 0.3693036 160 4 0.3607479 384 7 0.719915 115 7 0.783077 75 4 0.5450742 122 4 0.7925823 123 6 0.5993620 92 5 0.666792 94 6 0.6456092 241 5 0.634854 313 4 0.582418 91 5 0.7981037 290 7 0.5932853 254 5 0.4433887 387 7 0.8779382 191 7 0.0000000 210 7 0.1666667 170 5 0.1666667 152 5 0.089286 46 6 0.175000 228 7 0.0363636 273 7 0.4317457 161 7 0.5797085 163 7 0.6150078 136 6 0.3547009 85 3 0.5877551 121 6 0.6532843 0.5336586 0.5693479 0.6896539 0.5395511 0.835427 0.6932787 0.5280068 0.4526872 0.7436388 0.7325674 0.8143559 0.1639871 0.8036288 0.5374245 0.7591997 NA 0.2529421 0.2657665 0.6444005 0.8053346 0.2894349 0.9242299 0.6069478 0.6937299 0.4953856 0.52538959 0.508610 0.6436753 0.4996192 0.3734680 0.8668491 0.0000000 0.0000000 0.00000000 0.00000000 0.000000 0.0000000 0.4566985 0.3362832 0.4261009 0.4111553 0.3660409 3 0.5744222 0.579040 -1.0832e-02 5 0.572249 0.633222 -0.06097386 9.8967e-01 3.1325e-01 insignificant 1.000000 1.000000 insignificant 0.96990662 0.55610298 insignificant 1.00000 1.00000 insignificant -0.06349638 0.3046911 lowCoverage 1.00000 lowCoverage 0.5744222 0.0139018 0.56389142 5 0.572249 0.2074332 0.3648153 1.0071e-34 9.9999e-01 hypermethylated 4.0282e-33 1.0000e+00 hypermethylated 1.6645e-14 9.9362e-01 hypermethylated 9.7912e-13 1.0000e+00 hypermethylated 0.4943803 1.2127e-08 lowCoverage 9.3285e-07 lowCoverage 0.5729713 0.4489489 0.14584184 4 0.472249 0.4877340 -0.01548543 7.7917e-02 8.6182e-01 lowCoverage 9.2850e-01 1.0000e+00 lowCoverage 1.2883e-02 8.5594e-01 lowCoverage 3.1422e-01 1.0000e+00 lowCoverage 8.6260e-02 2.4429e-01 lowCoverage 1.0000000 lowCoverage 0.579040 0.0139018 0.57621501 5 0.6332224 0.2074332 0.42578917 4.9929e-35 1.0000e+00 hypermethylated 2.7738e-33 1.0000e+00 hypermethylated 8.0854e-14 9.9997e-01 hypermethylated 5.2545e-12 1.0000e+00 hypermethylated 0.5578767 5.1869e-09 hypermethylated 6.1272e-07 hypermethylated 0.578855 0.4496241 0.15344035 4 0.5924693 0.5419266 0.05054270 1.5682e-02 9.8321e-01 lowCoverage 2.3406e-01 1.0000e+00 lowCoverage 6.5584e-03 9.8296e-01 lowCoverage 1.9874e-01 1.00000000 lowCoverage 1.4976e-01 4.2740e-02 weaklyHypermeth 0.8548017 insignificant 0.0129870 0.4496241 -4.3360e-01 6 0.1193702 0.5419266 -0.4225564 1.0000e+00 6.6243e-28 hypomethylated 1.0000e+00 6.6243e-26 hypomethylated 1.0000e+00 9.9746e-09 hypomethylated 1.0000e+00 5.6401e-07 hypomethylated -0.40811981 2.8940e-04 hypomethylated 1.0360e-02 hypomethylated chr9 131643017 131644017 34725 USP20 ENSG00000136878 0.7976101 146 5 0.674033 159 5 0.4807143 36 4 0.792588 192 5 0.532407 40 4 0.649284 234 5 0.609722 42 4 0.664301 67 4 0.6418269 67 4 0.5619048 26 4 0.756503 168 5 0.5142857 18 2 0.6466880 63 4 0.557937 42 4 0.6411111 45 4 0.3900000 19 2 NA 0 0 0.7025000 119 5 0.8331624 86 5 0.545268 143 5 0.666667 33 2 0.5357143 38 4 0.6908397 72 5 0.5750000 29 3 0.631481 47 5 0.6321371 133 5 0.495507 60 4 0.533333 15 1 0.6959620 85 5 0.5851435 136 5 0.6001277 129 5 0.7071815 181 5 0.5449346 89 5 0.7250000 31 4 0.5352978 96 5 0.634921 56 4 0.569697 67 5 0.4782935 138 5 0.6008760 129 5 0.6597891 115 5 0.7009998 180 5 0.7769231 57 4 0.6757804 144 5 0.7262041 0.6640296 0.6271757 0.7270088 0.7024266 0.792801 0.6957854 0.7547128 0.7107648 0.5648604 0.7009157 0.7011494 0.7463012 0.7458493 0.7918263 0.5402299 NA 0.6773946 0.8155516 0.6738448 0.7816092 0.5701970 0.7839679 0.7931034 0.7496807 0.6891381 0.60506348 0.720307 0.7113196 0.7016008 0.7182581 0.7712096 0.6700098 0.6128900 0.57029729 0.44006568 0.571508 0.5511306 0.6840531 0.6622103 0.6691270 0.6852343 0.6299657 1 0.7406542 0.736402 -1.2575e-04 5 0.637268 0.537763 0.09950519 5.9340e-01 5.9929e-01 insignificant 1.000000 1.000000 insignificant 0.86196447 0.56787290 insignificant 1.00000 1.00000 insignificant 0.01872531 0.5790721 lowCoverage 1.00000 lowCoverage 0.7406542 0.6477987 0.10356986 5 0.637268 0.5181988 0.1190694 3.6786e-05 9.9995e-01 weaklyHypermeth 3.0913e-04 1.0000e+00 weaklyHypermeth 1.5082e-02 9.9994e-01 weaklyHypermeth 1.1783e-01 1.0000e+00 insignificant 0.0497925 2.8452e-01 lowCoverage 1.0000e+00 lowCoverage 0.7495560 0.7504000 0.03277142 5 0.676488 0.5745608 0.10192696 7.6532e-02 9.3566e-01 insignificant 9.2850e-01 1.0000e+00 insignificant 1.0679e-01 9.6907e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -5.1724e-02 2.1094e-01 lowCoverage 1.0000000 lowCoverage 0.736402 0.6477987 0.10476505 5 0.5377631 0.5181988 0.01956422 1.6858e-03 9.9162e-01 weaklyHypermeth 1.2487e-02 1.0000e+00 weaklyHypermeth 1.1166e-02 9.9655e-01 weaklyHypermeth 8.8618e-02 1.0000e+00 weaklyHypermeth 0.0310672 4.6737e-01 lowCoverage 1.0000e+00 lowCoverage 0.746015 0.7504000 0.03440723 5 0.6427084 0.5745608 0.06814757 1.5519e-01 9.2732e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.5365e-02 9.3734e-01 insignificant 1.0000e+00 1.00000000 insignificant -7.0449e-02 7.8750e-02 lowCoverage 1.0000000 lowCoverage 0.6497890 0.7504000 -6.8126e-02 5 0.5233985 0.5745608 -0.0511623 9.9130e-01 4.8307e-02 weaklyHypometh 1.0000e+00 3.1573e-01 insignificant 9.9958e-01 1.0190e-01 insignificant 1.0000e+00 6.6170e-01 insignificant -0.10151641 5.3370e-02 lowCoverage 4.0998e-01 lowCoverage chr9 131698217 131699217 34730 ENSG00000216693 0.7080046 555 14 0.622187 311 14 0.6086331 259 14 0.625542 413 14 0.725782 163 14 0.660386 769 14 0.663299 259 14 0.631742 294 14 0.6921221 254 14 0.7099466 200 14 0.635366 466 14 0.6474340 141 11 0.6903717 238 14 0.714286 39 2 0.6210939 243 14 0.6558241 87 9 0.6785474 155 13 0.6328880 361 14 0.6917953 353 14 0.665593 531 14 0.765391 125 9 0.7161032 196 14 0.6892831 318 14 0.6511224 154 13 0.756667 111 13 0.6713196 348 14 0.713340 152 12 0.680079 72 9 0.7357784 235 14 0.6849695 430 14 0.6799280 436 14 0.7450706 713 14 0.6019043 243 14 0.6716270 238 14 0.7033409 338 14 0.730791 130 12 0.594778 181 12 0.6399824 410 14 0.7081478 355 14 0.7379400 414 14 0.7685471 397 14 0.6999689 381 14 0.7261126 401 14 0.7204993 0.6551330 0.6376690 0.7049211 0.7631165 0.688027 0.6822318 0.6918251 0.6733507 0.7558398 0.7018288 0.6610811 0.7193204 0.6973498 0.6776145 0.6832959 0.6748488 0.7033083 0.7144598 0.7096541 0.7720953 0.7445252 0.7157959 0.6828389 0.7797135 0.6817092 0.73125336 0.683707 0.7512779 0.6816771 0.6934132 0.7432660 0.6163571 0.7078954 0.69934288 0.73301664 0.644286 0.6283694 0.7370650 0.7464961 0.7872756 0.7274400 0.7504212 10 0.7034970 0.723404 -2.2885e-02 14 0.643528 0.722932 -0.07940389 9.9286e-01 6.5762e-03 weaklyHypometh 1.000000 0.411014 insignificant 0.99262187 0.01147826 weaklyHypometh 1.00000 0.95652 insignificant -0.04337880 0.0034606 weaklyHypometh 0.79025 insignificant 0.7039106 0.6688312 0.03562225 14 0.673096 0.6524833 0.0206131 5.2538e-04 8.8327e-01 weaklyHypermeth 3.8349e-03 1.0000e+00 weaklyHypermeth 4.0599e-02 8.5244e-01 weaklyHypermeth 2.7265e-01 1.0000e+00 insignificant 0.0069716 7.7844e-01 insignificant 1.0000e+00 insignificant 0.7039106 0.7664271 -0.05125517 14 0.673096 0.7400601 -0.06696371 9.9988e-01 2.3023e-05 weaklyHypometh 1.0000e+00 2.5581e-03 weaklyHypometh 9.9986e-01 3.8874e-04 weaklyHypometh 1.0000e+00 2.5916e-02 weaklyHypometh -6.4101e-02 2.2691e-03 weaklyHypometh 0.0859141 weaklyHypometh 0.723236 0.6688312 0.06144047 14 0.7044606 0.6524833 0.05197729 6.4484e-06 9.5948e-01 weaklyHypermeth 6.2004e-05 1.0000e+00 weaklyHypermeth 1.8704e-03 9.8493e-01 weaklyHypermeth 1.7813e-02 1.0000e+00 weaklyHypermeth 0.0503504 7.9608e-02 insignificant 5.4155e-01 insignificant 0.723236 0.7664271 -0.02827147 14 0.7044606 0.7400601 -0.03559956 9.8998e-01 5.2968e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6044e-01 1.6064e-01 insignificant 1.0000e+00 1.00000000 insignificant -2.0722e-02 2.2631e-01 insignificant 1.0000000 insignificant 0.6688312 0.7664271 -8.7502e-02 14 0.6524833 0.7400601 -0.0875768 9.9999e-01 1.9514e-06 weaklyHypometh 1.0000e+00 2.7877e-05 weaklyHypometh 1.0000e+00 7.7574e-05 weaklyHypometh 1.0000e+00 1.6161e-03 weaklyHypometh -0.07107275 2.4750e-02 weaklyHypometh 2.5000e-01 insignificant chr9 132010517 132011517 34750 FREQ ENSG00000107130 0.6239766 60 3 0.720053 70 4 0.6754902 84 5 0.937500 99 3 0.767949 74 5 0.902572 109 3 0.899068 126 5 0.636856 112 4 0.7277778 78 5 0.8000000 49 5 0.806310 153 5 0.5967836 62 5 0.4782805 108 5 0.778656 68 3 0.6581699 126 5 0.8632323 49 5 0.5000000 10 1 0.8363095 59 3 0.7652174 39 1 0.635652 74 4 0.699167 56 4 0.6666667 10 0 0.7537143 86 4 0.8164286 58 5 0.711111 17 3 0.5627934 168 4 0.443377 38 3 0.656061 46 4 0.6342857 27 5 0.5887913 218 4 0.5745996 263 5 0.8676169 131 3 0.8155556 109 5 0.7128571 97 5 0.7913043 95 5 1.000000 2 0 0.786465 113 4 0.3995664 233 4 0.8108862 103 3 0.6889027 139 3 0.9095833 75 3 1.0000000 10 0 0.7355511 95 3 0.8596491 0.8297752 0.7097886 0.8974609 0.7139757 0.840157 0.8708669 0.6917170 0.6875000 0.6718750 0.8593434 0.5811632 0.5246394 0.7772601 0.5824142 0.8608428 0.7451042 0.7851562 0.7500000 0.7225543 0.9009766 0.5625000 0.9385714 0.8747210 0.7086445 0.7466502 0.57116477 0.644058 0.6031250 0.6209337 0.6552024 0.8921840 0.8523065 0.9000000 0.65760870 NA 0.947846 0.4336637 0.7517881 0.8125226 0.8813281 0.9982639 0.7379470 0 0.7501554 0.719141 3.7457e-02 4 0.745234 0.675262 0.06997175 4.6692e-02 9.8436e-01 lowCoverage 1.000000 1.000000 lowCoverage 0.08817606 0.90744797 lowCoverage 1.00000 1.00000 lowCoverage 0.06594179 0.1496684 lowCoverage 1.00000 lowCoverage 0.7501554 0.6887519 0.06165979 5 0.745234 0.6997341 0.0455001 2.6989e-01 8.4891e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.1291e-01 6.5100e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0204653 8.1827e-01 lowCoverage 1.0000e+00 lowCoverage 0.7501554 0.7914692 -0.03591958 3 0.745234 0.7045562 0.04067808 4.1530e-01 1.7622e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 6.9572e-01 3.3344e-02 lowCoverage 1.0000e+00 7.0945e-01 lowCoverage -9.8492e-02 1.7096e-01 lowCoverage 1.0000000 lowCoverage 0.719141 0.6887519 0.03087242 4 0.6752625 0.6997341 -0.02447165 6.8849e-01 4.0609e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.9022e-01 1.1339e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0864071 3.5554e-01 lowCoverage 1.0000e+00 lowCoverage 0.719141 0.7914692 -0.06197900 3 0.6752625 0.7045562 -0.02929367 8.2396e-01 7.3802e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.2328e-01 7.1481e-02 lowCoverage 1.0000e+00 1.00000000 lowCoverage -1.6443e-01 4.1511e-02 lowCoverage 0.8548017 lowCoverage 0.6887519 0.7914692 -1.0348e-01 3 0.6997341 0.7045562 -0.0048220 7.9867e-01 4.7003e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 6.7555e-01 7.7463e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.07802657 4.4934e-01 lowCoverage 1.0000e+00 lowCoverage chr9 132401317 132402317 34756 ASS1 ENSG00000130707 0.7003968 41 6 0.600000 23 1 0.5395623 61 6 0.607937 50 6 0.407143 32 5 0.552327 84 7 0.599206 48 6 0.579623 82 6 0.4697279 62 6 0.7054094 106 6 0.606546 72 6 0.6753247 61 6 0.5210729 94 6 0.562500 57 6 0.6901471 95 6 0.3333333 16 0 1.0000000 1 0 0.5613404 60 6 0.6662698 36 6 0.536565 45 6 0.715909 49 4 0.5199346 87 6 0.5212963 42 5 0.5830177 53 6 0.727120 95 6 0.6398810 45 6 0.704473 97 5 0.411111 22 2 0.6821351 80 6 0.6203704 49 6 0.6070707 55 6 0.6206349 74 7 0.0748418 73 6 0.4027778 81 6 0.2857143 23 2 0.055556 25 2 0.212129 102 6 0.2916667 48 6 0.7261905 37 6 0.6638889 46 2 0.7166667 29 3 0.5805556 57 5 0.7177674 61 6 0.7024902 0.6990826 0.5385970 0.6158148 0.4802752 0.666152 0.5709371 0.6669129 0.5428353 0.7034645 0.6186138 0.7642480 0.5764272 0.6531600 0.6720318 0.3761468 NA 0.5939225 0.6365007 0.5333661 0.8131776 0.4956518 0.5409021 0.7636920 0.6841057 0.6055046 0.69323643 0.474006 0.6831445 0.5677880 0.5789547 0.6535168 0.0752336 0.3753823 0.33027523 0.04587156 0.270928 0.2740826 0.6898209 0.6420489 0.7022936 0.5619266 0.6753249 0 0.6207815 0.636364 -3.5015e-03 6 0.497585 0.582657 -0.08507193 5.8537e-01 3.2769e-01 insignificant 1.000000 1.000000 insignificant 0.92517296 0.17741823 insignificant 1.00000 1.00000 insignificant -0.01702461 0.6768103 insignificant 1.00000 insignificant 0.6207815 0.2528409 0.37919784 6 0.497585 0.1858100 0.3117749 6.3512e-18 1.0000e+00 hypermethylated 1.1762e-16 1.0000e+00 hypermethylated 3.1438e-09 1.0000e+00 hypermethylated 7.4853e-08 1.0000e+00 hypermethylated 0.3752740 2.9565e-04 lowCoverage 5.4749e-03 lowCoverage 0.6355311 0.6608696 -0.02425868 6 0.637405 0.6708888 -0.03348391 4.6542e-01 9.6623e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 6.1927e-01 5.5518e-02 insignificant 1.0000e+00 9.7401e-01 insignificant -8.5292e-02 5.3697e-02 lowCoverage 0.7065370 lowCoverage 0.636364 0.2528409 0.37706916 6 0.5826568 0.1858100 0.39684685 2.0325e-14 1.0000e+00 hypermethylated 3.7639e-13 1.0000e+00 hypermethylated 7.6789e-08 1.0000e+00 hypermethylated 1.6924e-06 1.0000e+00 hypermethylated 0.3922986 2.7730e-04 lowCoverage 5.5461e-03 lowCoverage 0.639566 0.6608696 -0.03702739 6 0.6310424 0.6708888 -0.03984634 7.1473e-01 1.0062e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.4901e-01 2.5586e-01 insignificant 1.0000e+00 1.00000000 insignificant -6.8268e-02 1.0252e-01 lowCoverage 1.0000000 lowCoverage 0.2572254 0.6608696 -4.1981e-01 6 0.2477466 0.6708888 -0.4231421 1.0000e+00 1.8564e-11 hypomethylated 1.0000e+00 4.8853e-10 hypomethylated 1.0000e+00 8.1911e-07 hypomethylated 1.0000e+00 2.9254e-05 hypomethylated -0.46056625 1.1819e-04 lowCoverage 6.2321e-03 lowCoverage chr9 132778017 132779017 34768 QRFP ENSG00000188710 0.7896480 1009 30 0.670595 622 29 0.7672126 500 22 0.704083 1103 26 0.748740 383 32 0.895344 769 29 0.815602 525 31 0.788740 524 30 0.7794867 483 28 0.7530671 450 27 0.767181 831 30 0.8097084 220 21 0.5224938 718 28 0.748196 230 19 0.7080533 539 27 0.7981268 187 20 0.6964743 93 8 0.7059856 1724 29 0.7985825 529 26 0.632651 932 28 0.742880 308 28 0.4960469 246 18 0.7816156 648 25 0.8093741 196 13 0.724731 605 21 0.8359446 1030 29 0.847295 556 28 0.768783 184 13 0.6967053 763 27 0.7090358 1100 29 0.6880924 1208 30 0.8631033 909 29 0.1827652 846 33 0.1968163 760 29 0.3770673 734 18 0.263204 273 24 0.260332 668 29 0.2211551 1093 30 0.3655457 978 31 0.4308830 1425 31 0.4328643 1135 26 0.5857397 1256 28 0.4557935 1013 29 0.8061087 0.6684021 0.7926580 0.6562794 0.7350212 0.893108 0.8130106 0.7884145 0.7615065 0.7500135 0.7876115 0.7769647 0.4968298 0.7259144 0.7137191 0.7820289 0.7345278 0.6656534 0.8190968 0.6373889 0.7724270 0.4534808 0.8393859 0.8017801 0.7458043 0.8214450 0.82864610 0.718709 0.7345291 0.7092609 0.7229817 0.9024740 0.1777876 0.1742071 0.34766774 0.27096737 0.223006 0.2134148 0.3187005 0.4052731 0.3852950 0.5422795 0.4563549 14 0.7486454 0.799148 -4.2403e-02 28 0.714220 0.709942 0.00427875 1.0000e+00 1.0178e-04 weaklyHypometh 1.000000 0.025445 weaklyHypometh 0.99206578 0.04633437 weaklyHypometh 1.00000 1.00000 insignificant -0.00196870 0.9538762 insignificant 1.00000 insignificant 0.7485645 0.2612077 0.49243484 28 0.706700 0.2304480 0.4762518 5.8768e-164 1.0000e+00 hypermethylated 1.4692e-161 1.0000e+00 hypermethylated 5.7846e-49 1.0000e+00 hypermethylated 1.9282e-46 1.0000e+00 hypermethylated 0.4947752 1.1007e-07 hypermethylated 6.1150e-06 hypermethylated 0.7487868 0.4552972 0.28815975 30 0.743818 0.4601474 0.28367039 6.8544e-75 1.0000e+00 hypermethylated 6.8544e-72 1.0000e+00 hypermethylated 5.5852e-37 1.0000e+00 hypermethylated 5.5852e-34 1.0000e+00 hypermethylated 2.9083e-01 3.4098e-04 hypermethylated 0.0237103 hypermethylated 0.799354 0.2609193 0.53729004 28 0.7417821 0.2041322 0.53764987 8.1616e-132 1.0000e+00 hypermethylated 2.7205e-129 1.0000e+00 hypermethylated 2.6298e-36 1.0000e+00 hypermethylated 8.7658e-34 1.0000e+00 hypermethylated 0.4967439 8.6821e-09 hypermethylated 8.6821e-07 hypermethylated 0.799484 0.4551249 0.32855816 27 0.7618302 0.4331203 0.32870991 5.9372e-75 1.0000e+00 hypermethylated 5.9372e-72 1.0000e+00 hypermethylated 3.2312e-33 1.0000e+00 hypermethylated 3.2312e-30 1.00000000 hypermethylated 2.9280e-01 1.1784e-04 hypermethylated 0.0235683 hypermethylated 0.2610984 0.4552033 -2.0196e-01 27 0.2154729 0.4451514 -0.2296786 9.9998e-01 3.2096e-28 hypomethylated 1.0000e+00 3.5663e-26 hypomethylated 1.0000e+00 1.7053e-16 hypomethylated 1.0000e+00 3.4106e-14 hypomethylated -0.20394188 2.1879e-03 weaklyHypometh 4.7563e-02 weaklyHypometh chr9 132792317 132793317 34769 QRFP ENSG00000188710 0.7478692 471 10 0.601414 383 9 0.7313363 221 9 0.619690 483 9 0.578630 205 9 0.626584 501 9 0.571662 224 9 0.681232 275 9 0.6632871 179 9 0.6507958 224 9 0.718032 432 9 0.6108267 98 5 0.6033962 284 9 0.750133 198 9 0.5569737 330 9 0.3888889 72 1 0.5204185 422 3 0.6054216 435 9 0.6355262 298 9 0.538144 413 9 0.428754 131 7 0.6055404 143 5 0.7183410 305 9 0.4729573 193 9 0.760590 219 7 0.7073312 387 9 0.534097 232 8 0.572741 96 6 0.6522601 331 9 0.6055050 450 9 0.6482404 412 9 0.8250840 381 9 0.6116494 349 9 0.6746153 217 7 0.5092114 208 8 0.520101 49 5 0.525363 255 9 0.6220180 480 9 0.6855294 464 10 0.7351319 360 9 0.5845899 412 9 0.6691986 318 9 0.6650561 450 9 0.7377807 0.6328189 0.7809462 0.7846720 0.7044348 0.786280 0.6486740 0.7491212 0.7208682 0.7696006 0.7747994 0.7028696 0.7791610 0.7827473 0.7166106 0.5710784 0.5816612 0.6745632 0.6788768 0.7289526 0.6984703 0.6217167 0.8033268 0.7288628 0.7152837 0.7525046 0.64883015 0.786814 0.7562476 0.7533049 0.7037845 0.8363018 0.7152204 0.6095454 0.66581394 0.55659346 0.777160 0.7192389 0.6881801 0.7074584 0.6800492 0.7252630 0.7027184 5 0.7278058 0.743902 -1.2622e-02 9 0.667787 0.590193 0.07759449 4.7846e-01 1.2615e-01 insignificant 1.000000 1.000000 insignificant 0.51825202 0.16977761 insignificant 1.00000 1.00000 insignificant -0.00760709 0.8462627 insignificant 1.00000 insignificant 0.7280745 0.6578947 0.07265859 9 0.649645 0.5555543 0.0940905 6.3978e-06 8.5017e-01 weaklyHypermeth 5.7638e-05 1.0000e+00 weaklyHypermeth 7.9581e-02 8.8185e-01 insignificant 5.0689e-01 1.0000e+00 insignificant 0.0428534 2.3350e-01 insignificant 1.0000e+00 insignificant 0.7286391 0.7035928 0.03198947 9 0.648246 0.6776400 -0.02939451 1.5766e-01 5.2992e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.2000e-01 2.7975e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -4.7888e-02 1.5390e-01 insignificant 1.0000000 insignificant 0.745332 0.6578947 0.08706356 9 0.6066329 0.5555543 0.05107858 9.5510e-06 8.5515e-01 weaklyHypermeth 9.0104e-05 1.0000e+00 weaklyHypermeth 7.0136e-02 8.9173e-01 insignificant 4.5840e-01 1.0000e+00 insignificant 0.0504605 2.6472e-01 insignificant 1.0000e+00 insignificant 0.746999 0.7036482 0.05102348 9 0.6752894 0.6787374 -0.00344792 3.0374e-03 7.3852e-01 weaklyHypermeth 5.8411e-02 1.0000e+00 weaklyHypermeth 2.6490e-02 5.2909e-01 weaklyHypermeth 4.9982e-01 1.00000000 insignificant -4.0281e-02 3.4646e-01 insignificant 1.0000000 insignificant 0.6580811 0.7026078 -3.6755e-02 9 0.5802451 0.6430415 -0.0627964 7.3369e-01 8.6852e-03 weaklyHypometh 1.0000e+00 6.5302e-02 weaklyHypometh 6.5166e-01 5.8008e-02 insignificant 1.0000e+00 4.2969e-01 insignificant -0.09074156 3.6368e-02 weaklyHypometh 3.3127e-01 insignificant chr9 132827217 132828217 34772 FIBCD1 ENSG00000130720 0.7488889 64 5 0.341204 52 5 0.6125024 116 5 0.777778 9 0 0.771852 93 5 0.966667 20 3 0.864666 116 5 0.554545 24 1 0.6560784 74 5 0.6968182 45 5 0.742599 149 5 0.6293885 123 5 0.2331535 136 5 NA 0 0 0.5233445 68 5 0.6784799 144 5 0.4193914 113 5 0.3866667 18 2 0.5292892 91 5 0.624206 35 4 0.733333 29 3 NA 0 0 0.9750000 39 4 0.7833333 18 1 0.000000 1 0 0.4533333 57 5 0.753333 22 1 0.960000 31 5 0.4333333 21 3 0.5844444 67 5 0.5946405 110 5 0.9321154 54 5 0.0000000 101 5 0.0181818 120 5 0.0000000 109 5 0.000000 2 0 0.000000 28 4 0.0000000 116 5 0.7250000 28 2 0.6500000 45 5 0.7166667 13 0 0.2777778 7 0 0.8700000 20 2 0.8040123 0.3605120 0.5665258 0.7592593 0.7400362 0.930556 0.8338675 0.4053030 0.6884191 0.7398990 0.7394641 0.6316964 0.2250305 NA 0.4877369 0.7408298 0.3140077 0.4768519 0.5325224 0.7577160 0.7546296 NA 1.0000000 0.6458333 0.4177045 0.4898148 0.73148148 0.916667 0.5111111 0.5262346 0.5002723 0.9488515 0.0000000 0.0000000 0.00000000 0.00000000 0.000000 0.0000000 0.7083333 0.5373677 0.5000000 0.2916667 0.7791667 0 0.6080537 0.690423 -8.2112e-02 5 0.605494 0.695737 -0.09024275 9.9237e-01 1.4440e-02 weaklyHypometh 1.000000 0.565848 insignificant 0.99478620 0.02975752 weaklyHypometh 1.00000 1.00000 insignificant -0.03598928 0.7151438 lowCoverage 1.00000 lowCoverage 0.6080537 0.0042017 0.60429142 5 0.605494 0.0047059 0.6007881 3.1145e-26 1.0000e+00 hypermethylated 8.6513e-25 1.0000e+00 hypermethylated 3.6278e-13 1.0000e+00 hypermethylated 1.5773e-11 1.0000e+00 hypermethylated 0.6157865 1.9669e-11 lowCoverage 2.4587e-09 lowCoverage 0.6080537 0.6725664 -0.06425159 2 0.605494 0.6961598 -0.09066578 8.4751e-01 2.3127e-02 lowCoverage 1.0000e+00 4.7197e-01 lowCoverage 8.4812e-01 3.0624e-02 lowCoverage 1.0000e+00 6.9601e-01 lowCoverage -2.9072e-02 7.9736e-01 lowCoverage 1.0000000 lowCoverage 0.690423 0.0042017 0.68696450 5 0.6957367 0.0047059 0.69103084 2.5688e-23 1.0000e+00 hypermethylated 6.7599e-22 1.0000e+00 hypermethylated 7.8605e-11 1.0000e+00 hypermethylated 3.1442e-09 1.0000e+00 hypermethylated 0.6517758 2.0584e-05 lowCoverage 5.5633e-04 lowCoverage 0.690423 0.6725664 0.01762077 2 0.6957367 0.6961598 -0.00042303 4.5004e-01 5.4585e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 4.4728e-01 4.9707e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 6.9172e-03 9.5922e-01 lowCoverage 1.0000000 lowCoverage 0.0042017 0.6725664 -6.6944e-01 2 0.0047059 0.6961598 -0.6914539 1.0000e+00 8.0130e-19 lowCoverage 1.0000e+00 3.6423e-17 lowCoverage 1.0000e+00 4.1752e-08 lowCoverage 1.0000e+00 2.0876e-06 lowCoverage -0.64485859 2.8804e-03 lowCoverage 5.6478e-02 lowCoverage chr9 133103317 133104317 34777 ENSG00000208557 0.6055363 422 12 0.493060 277 14 0.6509998 243 9 0.565399 320 14 0.365082 121 9 0.671838 547 12 0.545440 181 10 0.634403 339 17 0.4599689 261 12 0.6257035 194 9 0.778021 425 16 0.4560023 73 7 0.4004782 317 9 0.648485 187 11 0.5908645 217 12 0.3018648 78 6 0.5804245 275 5 0.5432172 435 10 0.5665205 215 10 0.516896 414 9 0.674987 181 11 0.3720599 207 9 0.6154330 281 12 0.5420114 139 7 0.547810 168 11 0.6216824 395 17 0.496301 239 13 0.435220 129 7 0.6843291 211 9 0.5402073 397 17 0.5955631 509 17 0.7512512 499 14 0.3661588 288 12 0.4207714 247 14 0.2400301 206 8 0.236818 234 13 0.320805 291 15 0.0841900 526 17 0.3469523 339 10 0.4661977 346 14 0.4276373 352 7 0.3438128 338 7 0.4579048 318 14 0.6141412 0.4874784 0.5515726 0.5466751 0.4744625 0.673107 0.4719380 0.5765327 0.5023022 0.6285096 0.6820508 0.5221054 0.4471192 0.5697792 0.5208556 0.3052663 0.6649114 0.5292761 0.5620598 0.5942280 0.6465466 0.4272804 0.6209551 0.3772431 0.5974705 0.5535916 0.48792738 0.470531 0.6448526 0.5157569 0.5902382 0.6518584 0.2217309 0.4222569 0.24697408 0.15921931 0.228329 0.0777823 0.4839792 0.5233934 0.4689803 0.4030643 0.4502124 5 0.5982675 0.583781 1.6043e-02 9 0.554838 0.562343 -0.00750478 5.6751e-01 5.8605e-01 insignificant 1.000000 1.000000 insignificant 0.89903734 0.44413293 insignificant 1.00000 1.00000 insignificant -0.02306102 0.5705959 insignificant 1.00000 insignificant 0.5984835 0.2160804 0.38554363 9 0.585662 0.2067767 0.3788856 2.1359e-43 1.0000e+00 hypermethylated 1.2046e-41 1.0000e+00 hypermethylated 4.8374e-15 1.0000e+00 hypermethylated 3.0234e-13 1.0000e+00 hypermethylated 0.2718813 1.1211e-03 weaklyHypermeth 1.6016e-02 weaklyHypermeth 0.5993851 0.4559953 0.13190879 9 0.614231 0.4025298 0.21170080 4.6170e-10 1.0000e+00 weaklyHypermeth 5.7713e-08 1.0000e+00 weaklyHypermeth 6.1793e-06 1.0000e+00 weaklyHypermeth 5.2885e-04 1.0000e+00 weaklyHypermeth 1.4151e-01 2.1580e-03 weaklyHypermeth 0.0859141 weaklyHypermeth 0.584478 0.2160804 0.37509173 12 0.5935840 0.2067767 0.38680733 1.1362e-34 1.0000e+00 hypermethylated 5.9799e-33 1.0000e+00 hypermethylated 1.2877e-14 1.0000e+00 hypermethylated 9.1975e-13 1.0000e+00 hypermethylated 0.2949423 5.8214e-04 hypermethylated 1.0395e-02 hypermethylated 0.584528 0.4559953 0.12335016 9 0.5990889 0.4025298 0.19655908 3.1804e-10 1.0000e+00 weaklyHypermeth 2.8913e-08 1.0000e+00 weaklyHypermeth 3.6723e-06 1.0000e+00 weaklyHypermeth 4.5904e-04 1.00000000 weaklyHypermeth 1.6457e-01 1.3640e-03 weaklyHypermeth 0.1049238 insignificant 0.2164430 0.4559953 -2.3711e-01 11 0.2189400 0.4025298 -0.1835899 9.9994e-01 2.3259e-11 hypomethylated 1.0000e+00 5.9639e-10 hypomethylated 9.9903e-01 2.1526e-04 hypomethylated 1.0000e+00 3.5877e-03 hypomethylated -0.13037205 4.7881e-02 weaklyHypometh 3.8614e-01 insignificant chr9 133177817 133178817 34781 PPAPDC3 ENSG00000160539 0.9409931 217 10 0.854972 424 10 0.8582942 360 10 0.951603 267 10 0.902245 319 10 0.933592 315 10 0.864538 309 10 0.938986 419 10 0.8864460 258 10 0.8362202 316 10 0.932383 603 10 0.9144231 91 9 0.9031467 366 10 0.956175 290 10 0.9361189 363 10 1.0000000 31 5 0.5000000 7 1 0.8745891 243 10 0.9436786 349 10 0.945172 230 10 0.841195 179 10 0.8916026 111 10 0.8817917 214 10 0.9199611 155 10 0.897727 100 10 0.9426644 694 10 0.675335 260 10 0.728175 103 8 0.8629470 271 10 0.8728709 789 10 0.9326373 1224 10 0.9428545 380 10 0.5992682 432 10 0.8272209 328 10 0.7778339 429 9 0.743750 35 1 0.607693 187 11 0.7732312 792 10 0.7972370 168 10 0.9118316 214 10 0.9297059 138 10 0.8173160 144 10 0.9347736 154 10 0.9426504 0.8597897 0.8610858 0.9525906 0.8968045 0.932939 0.8600470 0.9389707 0.8811656 0.9149370 0.9302667 0.9085601 0.9036153 0.9548866 0.9364151 0.9743583 NA 0.8751201 0.9430458 0.9313730 0.8477711 0.8937487 0.8898010 0.9097008 0.8852522 0.9369425 0.82027432 0.820268 0.9497904 0.9590269 0.9273103 0.9421811 0.6762283 0.8310725 0.76016554 0.79705364 0.738552 0.7845133 0.8797041 0.9105256 0.9243159 0.8973604 0.9406849 10 0.9134349 0.920394 -4.7786e-03 10 0.891907 0.899034 -0.00712751 7.7078e-01 3.2543e-01 insignificant 1.000000 1.000000 insignificant 0.39805992 0.32341502 insignificant 1.00000 1.00000 insignificant 0.02786534 0.4080370 insignificant 1.00000 insignificant 0.9134349 0.7750000 0.13915804 10 0.891907 0.7413163 0.1505903 7.0934e-23 9.9951e-01 weaklyHypermeth 1.6496e-21 1.0000e+00 weaklyHypermeth 3.5317e-07 9.9940e-01 weaklyHypermeth 6.3065e-06 1.0000e+00 weaklyHypermeth 0.1721794 4.3229e-03 weaklyHypermeth 4.9292e-02 weaklyHypermeth 0.9134499 0.8899756 0.00929910 10 0.900914 0.7996536 0.10126075 2.9502e-01 7.2214e-02 insignificant 1.0000e+00 8.9057e-01 insignificant 6.0042e-01 7.3571e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 1.5506e-02 6.8540e-01 insignificant 1.0000000 insignificant 0.919625 0.7739446 0.14402564 10 0.8254315 0.5824628 0.24296872 5.7337e-14 1.0000e+00 weaklyHypermeth 1.0059e-12 1.0000e+00 weaklyHypermeth 7.9620e-05 9.9996e-01 weaklyHypermeth 1.0078e-03 1.0000e+00 weaklyHypermeth 0.1443140 1.1732e-02 weaklyHypermeth 1.1732e-01 insignificant 0.920394 0.8910649 0.01561489 10 0.8990341 0.8723494 0.02668469 3.8752e-01 2.0740e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.4005e-01 1.0951e-01 insignificant 1.0000e+00 1.00000000 insignificant -1.2359e-02 7.5212e-01 insignificant 1.0000000 insignificant 0.7750000 0.8910649 -1.2680e-01 10 0.7413163 0.8723494 -0.1310331 9.9876e-01 4.0956e-08 weaklyHypometh 1.0000e+00 7.1853e-07 weaklyHypometh 9.9975e-01 1.1252e-04 weaklyHypometh 1.0000e+00 1.9740e-03 weaklyHypometh -0.15667336 1.0958e-02 weaklyHypometh 1.5175e-01 insignificant chr9 133194217 133195217 34782 PPAPDC3 ENSG00000160539 0.7420264 245 8 0.671557 258 8 0.7054834 237 8 0.801217 225 8 0.652230 138 8 0.804861 381 8 0.820413 195 8 0.660767 275 8 0.6392818 265 8 0.6951514 202 8 0.803427 312 8 0.7477837 136 8 0.6656966 235 9 0.732810 176 8 0.7461292 244 8 0.7867801 133 5 0.5896386 54 3 0.7426581 290 8 0.7285321 235 8 0.717233 265 8 0.717604 105 8 0.5473329 160 7 0.7704898 179 8 0.8009397 123 8 0.762302 157 8 0.7360450 298 8 0.684208 188 8 0.776603 131 8 0.8187450 194 8 0.6987236 331 8 0.6585140 412 8 0.8507019 327 8 0.7884367 207 9 0.6692762 157 8 0.9927536 160 6 0.709402 48 5 0.772874 236 8 0.6739107 286 8 0.6977258 225 8 0.6731284 197 8 0.5948731 151 8 0.7500325 182 8 0.6266189 200 8 0.6918991 0.6140409 0.6520857 0.7370049 0.7143545 0.739871 0.7579741 0.6713760 0.6702599 0.7619471 0.7580954 0.7150033 0.5614924 0.6813737 0.6328032 0.6692117 0.5498864 0.6283625 0.6611670 0.6483280 0.7003632 0.4872067 0.7104766 0.7538540 0.7122598 0.6806353 0.60410654 0.691471 0.7763313 0.6203282 0.6808588 0.8052393 0.7293620 0.6460971 0.88711316 0.60510689 0.781046 0.5569379 0.6236790 0.5796388 0.5009540 0.6581892 0.5516872 8 0.6800711 0.693282 -1.5472e-02 8 0.737823 0.724111 0.01371230 6.3222e-01 6.6177e-02 insignificant 1.000000 1.000000 insignificant 0.63061065 0.32949310 insignificant 1.00000 1.00000 insignificant -0.01250023 0.6549188 insignificant 1.00000 insignificant 0.6800711 0.6946984 -0.02020736 8 0.737823 0.7812162 -0.0433929 5.5598e-01 5.1922e-06 weaklyHypometh 1.0000e+00 7.4175e-04 weaklyHypometh 5.6184e-01 1.7964e-05 weaklyHypometh 1.0000e+00 3.5927e-03 weaklyHypometh -0.0450917 4.1412e-01 insignificant 1.0000e+00 insignificant 0.6800711 0.6188482 0.08536046 8 0.737823 0.6952435 0.04257980 5.7898e-04 9.7807e-01 weaklyHypermeth 1.6083e-02 1.0000e+00 weaklyHypermeth 8.8372e-03 9.5467e-01 weaklyHypermeth 2.4548e-01 1.0000e+00 insignificant 5.4208e-02 1.2363e-01 insignificant 1.0000000 insignificant 0.693282 0.6946984 0.00061329 8 0.7241110 0.7812162 -0.05710523 4.6032e-01 2.5694e-04 inconclusive 1.0000e+00 3.2117e-02 inconclusive 4.9802e-01 6.4836e-04 inconclusive 1.0000e+00 1.0806e-01 insignificant -0.0325915 5.6908e-01 insignificant 1.0000e+00 insignificant 0.693282 0.6188482 0.10323905 8 0.7241110 0.6952435 0.02886750 9.0859e-05 9.9411e-01 weaklyHypermeth 3.2449e-03 1.0000e+00 weaklyHypermeth 7.1863e-03 9.7546e-01 weaklyHypermeth 2.1136e-01 1.00000000 insignificant 6.6708e-02 9.2621e-02 insignificant 1.0000000 insignificant 0.6946984 0.6188482 1.3263e-01 8 0.7812162 0.6952435 0.0859727 2.7140e-07 9.9132e-01 weaklyHypermeth 1.3570e-04 1.0000e+00 weaklyHypermeth 8.3940e-04 9.2067e-01 weaklyHypermeth 2.0985e-01 1.0000e+00 insignificant 0.09929981 1.1762e-01 insignificant 7.3512e-01 insignificant chr9 133284617 133285617 34791 BAT2L1 ENSG00000130723 0.9433944 116 6 0.732313 59 7 0.7307082 120 6 0.937538 118 3 0.632977 50 5 0.690032 208 6 0.850000 48 3 0.803750 124 6 0.7517866 69 6 0.8354084 190 5 0.924249 227 7 0.7532949 62 6 0.9375419 172 6 0.891247 81 3 0.8711021 156 6 0.8689644 93 6 0.7916667 13 0 0.8989796 163 6 0.9050680 195 6 0.948352 139 6 0.810317 75 6 0.8997494 64 3 0.8325742 107 6 0.8493814 66 3 0.906224 66 3 0.9200487 106 7 0.780755 206 4 0.781548 57 5 0.7760317 100 5 0.9328945 146 7 0.8594164 164 7 0.9152653 223 6 0.8724548 95 5 0.7605517 103 6 0.9500000 64 5 0.888889 29 3 0.619243 49 5 0.9405128 79 6 0.9895833 49 3 0.9499567 142 6 0.9433084 104 3 0.7528404 85 6 0.8595782 88 6 0.9192550 0.6438121 0.6970840 0.8999566 0.6950708 0.819715 0.7345811 0.9094951 0.7789831 0.8190935 0.8891401 0.6775332 0.8959075 0.8771950 0.8514575 0.7945744 0.7271561 0.8935720 0.9040693 0.8983174 0.9195484 0.8163323 0.8873156 0.7023472 0.8337153 0.8570856 0.77405144 0.781474 0.8941652 0.8919192 0.8020552 0.8209304 0.8025415 0.8378517 0.88912656 0.96434938 0.748217 0.8820897 0.9745989 0.9251019 0.9622290 0.8973059 0.9254879 3 0.8585102 0.842754 1.3053e-02 6 0.859716 0.812578 0.04713836 4.2915e-01 4.7808e-01 insignificant 1.000000 1.000000 insignificant 0.67861064 0.34350948 insignificant 1.00000 1.00000 insignificant -0.02043192 0.4561265 insignificant 1.00000 insignificant 0.8585102 0.8353222 0.02076020 6 0.859716 0.6715112 0.1882053 3.3326e-01 8.6781e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.1262e-01 3.0545e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0036900 9.4934e-01 insignificant 1.0000e+00 insignificant 0.8587500 0.9294872 -0.07111484 6 0.883848 0.8123952 0.07145254 7.8772e-01 6.1613e-03 weaklyHypometh 1.0000e+00 1.6960e-01 insignificant 9.5510e-01 2.0744e-04 weaklyHypometh 1.0000e+00 1.8858e-02 weaklyHypometh -6.4135e-02 2.2182e-01 lowCoverage 1.0000000 lowCoverage 0.842754 0.8353222 0.01493440 6 0.8125781 0.6715112 0.14106690 1.3050e-01 5.4439e-01 insignificant 6.6580e-01 1.0000e+00 insignificant 6.3640e-01 3.6489e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0167419 7.6924e-01 insignificant 1.0000e+00 insignificant 0.843251 0.9294872 -0.08207291 6 0.8516504 0.8123952 0.03925521 4.4492e-01 2.6062e-04 weaklyHypometh 1.0000e+00 3.7232e-02 weaklyHypometh 7.2370e-01 3.3706e-03 weaklyHypometh 1.0000e+00 0.37450606 insignificant -4.3703e-02 3.7853e-01 lowCoverage 1.0000000 lowCoverage 0.8373206 0.9294872 -8.6543e-02 6 0.7554501 0.8123952 -0.0569451 9.9716e-01 5.6572e-02 insignificant 1.0000e+00 3.5805e-01 insignificant 9.8341e-01 5.3923e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.06044480 3.8988e-01 lowCoverage 1.0000e+00 lowCoverage chr9 133410817 133411817 34793 UCK1 ENSG00000130717 0.6026541 629 18 0.309732 526 21 0.1907710 538 17 0.346486 579 17 0.393017 521 17 0.187402 753 18 0.087976 807 17 0.234755 521 17 0.0987242 600 17 0.2601528 616 17 0.120570 699 21 0.1007374 659 13 0.1273703 464 17 0.195699 261 10 0.1814275 668 17 0.1435158 622 12 0.1966815 300 5 0.0860005 1062 18 0.2707276 593 17 0.832843 498 16 0.286058 236 16 0.2216495 307 13 0.1811252 386 21 0.4585409 295 17 0.378293 615 14 0.6894456 482 21 0.197457 596 21 0.510435 112 11 0.1685409 612 17 0.7504863 448 18 0.0348387 1228 21 0.1609121 723 18 0.0113657 552 17 0.0018946 707 17 0.0918561 760 16 0.000000 120 12 0.055911 392 18 0.0475028 882 22 0.3509670 639 17 0.1768649 653 18 0.6156660 368 17 0.2100927 765 17 0.1069672 709 18 0.5465824 0.2321374 0.1858966 0.2937407 0.2640935 0.076063 0.0979190 0.2518934 0.1226015 0.1566344 0.1124699 0.0750193 0.0849712 0.1873019 0.1895121 0.0561572 0.1832935 0.0659881 0.2470462 0.9084415 0.2761601 0.2397022 0.2090447 0.3929888 0.2620609 0.7570365 0.21047476 0.596847 0.2014065 0.7536230 0.0277826 0.0642036 0.0146387 0.0029325 0.00295021 0.00497810 0.035640 0.0105098 0.3681458 0.1508147 0.6592383 0.1136652 0.0596995 13 0.2094742 0.278138 -6.0578e-02 17 0.284566 0.297462 -0.01289665 9.9996e-01 1.7419e-01 insignificant 1.000000 1.000000 insignificant 0.99999965 0.00875827 weaklyHypometh 1.00000 0.87583 insignificant -0.08811977 0.2653287 insignificant 1.00000 insignificant 0.2095230 0.0114470 0.20569116 17 0.290550 0.0629614 0.2275887 1.4033e-12 1.0000e+00 hypermethylated 1.7991e-11 1.0000e+00 hypermethylated 1.1779e-21 1.0000e+00 hypermethylated 1.6827e-19 1.0000e+00 hypermethylated 0.2136071 7.2389e-05 hypermethylated 1.6086e-03 hypermethylated 0.2097549 0.2526383 -0.00391794 17 0.288023 0.3159615 -0.02793814 9.5336e-01 8.3285e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9874e-01 4.0793e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -4.3749e-02 6.7526e-01 insignificant 1.0000000 insignificant 0.278414 0.0117371 0.26816115 17 0.3231014 0.0859634 0.23713794 1.1317e-11 1.0000e+00 hypermethylated 1.6642e-10 1.0000e+00 hypermethylated 1.4109e-20 1.0000e+00 hypermethylated 2.3515e-18 1.0000e+00 hypermethylated 0.3017268 6.5329e-04 hypermethylated 1.1368e-02 hypermethylated 0.277916 0.2524737 0.04557634 16 0.2924284 0.2793553 0.01307316 8.7942e-01 9.9979e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.4127e-01 9.9993e-01 insignificant 1.0000e+00 1.00000000 insignificant 4.4370e-02 6.9917e-01 insignificant 1.0000000 insignificant 0.0114740 0.2525543 -2.1316e-01 16 0.0887239 0.2875716 -0.1988478 1.0000e+00 6.7180e-09 hypomethylated 1.0000e+00 1.3710e-07 hypomethylated 1.0000e+00 1.8764e-13 hypomethylated 1.0000e+00 2.3954e-11 hypomethylated -0.25735649 4.5104e-02 weaklyHypometh 3.7404e-01 insignificant chr9 133598217 133599217 34807 ENSG00000208535 0.7770405 196 8 0.602944 245 8 0.4395110 273 8 0.864526 184 8 0.730265 182 7 0.781551 249 8 0.856698 139 7 0.823449 178 8 0.6587257 139 7 0.8845240 261 8 0.855660 224 8 0.7014343 142 8 0.6470234 250 8 0.797435 165 8 0.8226900 273 8 0.6993405 166 8 0.8750000 18 1 0.6392264 241 8 0.8599549 272 8 0.893718 95 6 0.644586 104 7 0.7445887 79 6 0.7544185 112 8 0.7056818 61 6 0.469048 52 7 0.8455128 334 8 0.574623 103 6 0.726511 44 2 0.7590375 264 8 0.7954622 415 8 0.8713122 484 8 0.8948582 211 8 0.5034431 209 8 0.2146216 182 8 0.1256345 212 1 0.062500 49 4 0.587798 66 6 0.1306805 465 8 0.9455925 184 8 0.9402174 182 8 0.9299290 149 8 0.9084010 230 8 0.8833102 202 8 0.7450846 0.5728735 0.4590011 0.8685690 0.6801062 0.859151 0.8374381 0.7871103 0.6927851 0.8812931 0.8034074 0.7423411 0.6130654 0.7899379 0.7607707 0.6175849 0.7613752 0.5841209 0.8002611 0.8380304 0.6965523 0.6698401 0.7735147 0.7198841 0.5188769 0.8044916 0.54076468 0.578668 0.7744987 0.7360018 0.8472845 0.8708018 0.3708012 0.1835392 0.06121706 0.02988048 0.514229 0.0955747 0.9243234 0.8929499 0.8864026 0.8316098 0.8253694 5 0.7462073 0.776845 -4.0855e-02 8 0.760444 0.821555 -0.06111030 9.8746e-01 3.3975e-02 weaklyHypometh 1.000000 0.790123 insignificant 0.55912960 0.34767047 insignificant 1.00000 1.00000 insignificant 0.02839925 0.5286486 insignificant 1.00000 insignificant 0.7461380 0.1783601 0.52792681 8 0.755500 0.2407142 0.5147857 1.6385e-40 1.0000e+00 hypermethylated 7.4476e-39 1.0000e+00 hypermethylated 3.0454e-14 1.0000e+00 hypermethylated 1.5227e-12 1.0000e+00 hypermethylated 0.4897563 2.0556e-03 weaklyHypermeth 2.6214e-02 weaklyHypermeth 0.7461380 0.9134108 -0.15866760 8 0.755500 0.9195264 -0.16402650 1.0000e+00 6.1056e-08 weaklyHypometh 1.0000e+00 1.2211e-05 weaklyHypometh 1.0000e+00 2.9848e-10 weaklyHypometh 1.0000e+00 1.3721e-07 weaklyHypometh -1.6095e-01 1.2013e-05 weaklyHypometh 0.0024026 weaklyHypometh 0.776746 0.1783601 0.57155606 8 0.7992490 0.2407142 0.55853479 1.5472e-33 1.0000e+00 hypermethylated 7.3674e-32 1.0000e+00 hypermethylated 9.9649e-11 1.0000e+00 hypermethylated 3.6907e-09 1.0000e+00 hypermethylated 0.4613571 2.3565e-03 weaklyHypermeth 3.1845e-02 weaklyHypermeth 0.776746 0.9134108 -0.11561876 8 0.7992490 0.9195264 -0.12027741 9.9992e-01 6.9655e-06 weaklyHypometh 1.0000e+00 1.3931e-03 weaklyHypometh 1.0000e+00 2.0325e-06 weaklyHypometh 1.0000e+00 0.00067750 weaklyHypometh -1.8935e-01 2.1225e-04 weaklyHypometh 0.0247826 weaklyHypometh 0.1783601 0.9134108 -6.8257e-01 8 0.2407142 0.9195264 -0.6788122 1.0000e+00 2.0128e-27 hypomethylated 1.0000e+00 1.6774e-25 hypomethylated 1.0000e+00 3.4167e-11 hypomethylated 1.0000e+00 3.1061e-09 hypomethylated -0.65071046 7.0816e-04 hypomethylated 2.1459e-02 hypomethylated chr9 133598617 133599617 34808 ENSG00000208535 0.7770405 196 8 0.602944 245 8 0.4395110 273 8 0.864526 184 8 0.730265 182 7 0.781551 249 8 0.856698 139 7 0.823449 178 8 0.6587257 139 7 0.8845240 261 8 0.855660 224 8 0.7014343 142 8 0.6470234 250 8 0.797435 165 8 0.8226900 273 8 0.6993405 166 8 0.8750000 18 1 0.6392264 241 8 0.8599549 272 8 0.893718 95 6 0.644586 104 7 0.7445887 79 6 0.7544185 112 8 0.7056818 61 6 0.469048 52 7 0.8455128 334 8 0.574623 103 6 0.726511 44 2 0.7590375 264 8 0.7954622 415 8 0.8713122 484 8 0.8948582 211 8 0.5034431 209 8 0.2146216 182 8 0.1256345 212 1 0.062500 49 4 0.587798 66 6 0.1306805 465 8 0.9455925 184 8 0.9402174 182 8 0.9299290 149 8 0.9084010 230 8 0.8833102 202 8 0.7450846 0.5728735 0.4590011 0.8685690 0.6801062 0.859151 0.8374381 0.7871103 0.6927851 0.8812931 0.8034074 0.7423411 0.6130654 0.7899379 0.7607707 0.6175849 0.7613752 0.5841209 0.8002611 0.8380304 0.6965523 0.6698401 0.7735147 0.7198841 0.5188769 0.8044916 0.54076468 0.578668 0.7744987 0.7360018 0.8472845 0.8708018 0.3708012 0.1835392 0.06121706 0.02988048 0.514229 0.0955747 0.9243234 0.8929499 0.8864026 0.8316098 0.8253694 5 0.7462073 0.776845 -4.0855e-02 8 0.760444 0.821555 -0.06111030 9.8746e-01 3.3975e-02 weaklyHypometh 1.000000 0.790123 insignificant 0.55912960 0.34767047 insignificant 1.00000 1.00000 insignificant 0.02839925 0.5286486 insignificant 1.00000 insignificant 0.7461380 0.1783601 0.52792681 8 0.755500 0.2407142 0.5147857 1.6385e-40 1.0000e+00 hypermethylated 7.4476e-39 1.0000e+00 hypermethylated 3.0454e-14 1.0000e+00 hypermethylated 1.5227e-12 1.0000e+00 hypermethylated 0.4897563 2.0556e-03 weaklyHypermeth 2.6214e-02 weaklyHypermeth 0.7461380 0.9134108 -0.15866760 8 0.755500 0.9195264 -0.16402650 1.0000e+00 6.1056e-08 weaklyHypometh 1.0000e+00 1.2211e-05 weaklyHypometh 1.0000e+00 2.9848e-10 weaklyHypometh 1.0000e+00 1.3721e-07 weaklyHypometh -1.6095e-01 1.2013e-05 weaklyHypometh 0.0024026 weaklyHypometh 0.776746 0.1783601 0.57155606 8 0.7992490 0.2407142 0.55853479 1.5472e-33 1.0000e+00 hypermethylated 7.3674e-32 1.0000e+00 hypermethylated 9.9649e-11 1.0000e+00 hypermethylated 3.6907e-09 1.0000e+00 hypermethylated 0.4613571 2.3565e-03 weaklyHypermeth 3.1845e-02 weaklyHypermeth 0.776746 0.9134108 -0.11561876 8 0.7992490 0.9195264 -0.12027741 9.9992e-01 6.9655e-06 weaklyHypometh 1.0000e+00 1.3931e-03 weaklyHypometh 1.0000e+00 2.0325e-06 weaklyHypometh 1.0000e+00 0.00067750 weaklyHypometh -1.8935e-01 2.1225e-04 weaklyHypometh 0.0247826 weaklyHypometh 0.1783601 0.9134108 -6.8257e-01 8 0.2407142 0.9195264 -0.6788122 1.0000e+00 2.0128e-27 hypomethylated 1.0000e+00 1.6774e-25 hypomethylated 1.0000e+00 3.4167e-11 hypomethylated 1.0000e+00 3.1061e-09 hypomethylated -0.65071046 7.0816e-04 hypomethylated 2.1459e-02 hypomethylated chr9 133704117 133705117 34810 ENSG00000212395 0.9131004 169 5 0.807263 131 5 0.7351037 98 5 0.931373 117 5 0.948252 60 5 0.922296 313 5 0.866667 89 5 0.980833 114 5 0.8800641 72 5 0.9363971 110 5 0.886522 196 5 1.0000000 38 3 0.9081429 103 5 0.791919 68 5 0.9196136 131 5 1.0000000 40 3 NA 0 0 0.8916308 206 5 0.9233545 360 5 0.914295 236 5 0.896471 76 5 0.8000000 8 0 0.9364662 144 5 0.8727273 57 5 0.942857 23 3 0.9110710 191 5 0.862831 127 5 0.763889 67 5 0.8604894 168 5 0.8982912 141 5 0.9146918 208 5 0.9425523 257 5 0.7198847 164 5 0.5106828 223 5 0.5300575 203 5 NA 0 0 0.779721 118 5 0.5453393 335 5 0.9523601 154 5 0.9041195 182 5 0.8986345 64 5 0.8950361 170 5 0.8969088 121 5 0.9228793 0.8555243 0.7387869 0.9523145 0.9657028 0.922738 0.8600856 0.9723549 0.9159158 0.8937872 0.8984407 1.0000000 0.9146549 0.9682669 0.8968219 1.0000000 NA 0.9039092 0.9197597 0.9287607 0.9055519 0.9325843 0.9659035 0.8176711 0.9181380 0.9111351 0.81974537 0.953652 0.9056224 0.9003567 0.9277973 0.9390224 0.7006834 0.3867953 0.40757458 NA 0.780651 0.3897946 0.9590738 0.9389965 0.8857343 0.9176322 0.8895755 3 0.9060023 0.903204 -1.5640e-03 5 0.835904 0.754134 0.08177002 6.8218e-01 5.1288e-01 insignificant 1.000000 1.000000 insignificant 0.88176381 0.50093152 insignificant 1.00000 1.00000 insignificant 0.01946282 0.3917390 lowCoverage 1.00000 lowCoverage 0.9063090 0.5858102 0.34017557 5 0.903085 0.5945348 0.3085505 2.4114e-17 9.9836e-01 hypermethylated 4.2394e-16 1.0000e+00 hypermethylated 2.8873e-08 9.9999e-01 hypermethylated 5.8924e-07 1.0000e+00 hypermethylated 0.2858538 5.0943e-03 lowCoverage 5.5982e-02 lowCoverage 0.9063090 0.9146165 -0.00816980 5 0.903085 0.9100916 -0.00700635 7.3171e-01 3.0467e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.5910e-01 6.2448e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -6.4209e-03 7.3790e-01 lowCoverage 1.0000000 lowCoverage 0.905673 0.5858102 0.31008373 5 0.9049613 0.5945348 0.31042645 1.1469e-10 9.9991e-01 hypermethylated 1.5090e-09 1.0000e+00 hypermethylated 1.4007e-06 1.0000e+00 hypermethylated 2.4574e-05 1.0000e+00 hypermethylated 0.2663910 6.6483e-03 lowCoverage 7.1487e-02 lowCoverage 0.905673 0.9146165 -0.00529705 5 0.9049613 0.9100916 -0.00513036 7.5281e-01 5.8471e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.0667e-01 8.9946e-01 insignificant 1.0000e+00 1.00000000 insignificant -2.5884e-02 2.0280e-01 lowCoverage 1.0000000 lowCoverage 0.5858102 0.9146165 -3.4979e-01 5 0.5945348 0.9100916 -0.3155568 9.9791e-01 7.7208e-06 hypomethylated 1.0000e+00 9.8985e-05 hypomethylated 9.9998e-01 9.0474e-05 hypomethylated 1.0000e+00 1.7399e-03 hypomethylated -0.29227465 5.3442e-03 lowCoverage 9.4211e-02 lowCoverage chr9 134028917 134029917 34815 NTNG2 ENSG00000196358 0.1169665 913 19 0.071149 1188 19 0.1661894 684 21 0.116129 778 18 0.100604 520 21 0.283461 1170 21 0.105537 875 21 0.143557 770 21 0.0701107 1105 21 0.1207028 834 21 0.134866 813 21 0.3170694 509 21 0.0301815 875 21 0.053362 381 13 0.0667455 849 21 0.2211460 532 21 0.0741926 556 17 0.0973884 821 19 0.0932659 581 19 0.054939 1021 21 0.189475 258 19 0.0354482 533 18 0.2128284 549 19 0.0774455 539 20 0.057903 356 18 0.0699765 1303 21 0.065461 581 19 0.066182 394 19 0.2117873 784 19 0.0369459 1376 21 0.0689128 1717 21 0.1800527 1189 21 0.4807903 702 21 0.3998641 415 19 0.2917580 378 12 0.555607 197 13 0.412479 434 19 0.6059805 931 21 0.1363479 1098 19 0.0725070 1031 19 0.0925336 863 18 0.1625095 1000 15 0.0555713 946 19 0.0983704 0.0695050 0.1603791 0.0975174 0.0782176 0.202409 0.0950418 0.1050548 0.0625554 0.1094516 0.1240028 0.3055401 0.0234499 0.0758697 0.0608515 0.1923906 0.0773709 0.0919650 0.0571096 0.0507054 0.2116007 0.0194348 0.1360951 0.0657141 0.0549867 0.0677581 0.05792378 0.059262 0.1186802 0.0321158 0.0313358 0.1822900 0.5229189 0.4014899 0.33012191 0.48167091 0.347171 0.5125470 0.0711140 0.0497387 0.0449601 0.0585307 0.0560325 18 0.1003550 0.077678 2.1117e-02 21 0.115702 0.080811 0.03489074 4.0637e-02 9.9998e-01 weaklyHypermeth 1.000000 1.000000 insignificant 0.02462564 0.99985028 weaklyHypermeth 1.00000 1.00000 insignificant 0.01584329 0.5517620 insignificant 1.00000 insignificant 0.1003741 0.3574943 -0.25600333 19 0.148300 0.4655407 -0.3172404 9.9960e-01 1.1388e-75 hypomethylated 1.0000e+00 1.1388e-72 hypomethylated 9.7990e-01 2.3154e-22 hypomethylated 1.0000e+00 2.3154e-19 hypomethylated -0.3358683 3.9161e-04 hypomethylated 6.7518e-03 hypomethylated 0.1003489 0.0552855 0.04627747 19 0.116328 0.1961176 -0.07978991 6.9910e-04 3.0959e-03 weaklyHypermeth 1.8397e-02 9.9867e-02 weaklyHypermeth 5.4477e-06 9.0652e-01 weaklyHypermeth 5.2885e-04 1.0000e+00 weaklyHypermeth 1.7984e-02 5.0481e-01 insignificant 1.0000000 insignificant 0.077880 0.3573770 -0.27596746 19 0.1258447 0.4447074 -0.31886267 9.9991e-01 6.7887e-56 hypomethylated 1.0000e+00 6.7887e-53 hypomethylated 9.9981e-01 1.7226e-17 hypomethylated 1.0000e+00 1.7226e-14 hypomethylated -0.3517116 2.3315e-04 hypomethylated 4.8574e-03 hypomethylated 0.077816 0.0552855 0.02423372 19 0.0918306 0.1961176 -0.10428696 1.3842e-01 1.7259e-02 inconclusive 1.0000e+00 6.1641e-01 insignificant 1.3157e-01 7.6046e-01 insignificant 1.0000e+00 1.00000000 insignificant 2.1410e-03 9.4109e-01 insignificant 1.0000000 insignificant 0.3571898 0.0552855 3.0771e-01 19 0.4396808 0.1961176 0.2435632 7.1584e-25 9.8650e-01 hypermethylated 7.1584e-22 1.0000e+00 hypermethylated 1.4462e-08 9.9868e-01 hypermethylated 1.4462e-05 1.0000e+00 hypermethylated 0.35385263 2.5846e-04 hypermethylated 9.9407e-03 hypermethylated chr9 134119417 134120417 34817 ENSG00000221105 0.7415692 349 13 0.617848 344 13 0.7466072 226 10 0.736024 292 14 0.714701 499 14 0.680436 412 13 0.646890 546 14 0.695118 274 13 0.7151782 598 13 0.7452996 344 14 0.727713 351 13 0.7411985 579 8 0.7005889 515 13 0.697592 507 13 0.7714721 706 13 0.7135604 345 8 0.7153559 817 8 0.6795386 478 12 0.6994555 287 14 0.689098 336 12 0.718051 104 12 0.8106061 36 2 0.7238499 345 11 0.6904229 121 12 0.696859 200 13 0.6686628 346 13 0.645184 140 10 0.752912 231 10 0.7451559 460 13 0.7211356 309 13 0.6654213 357 13 0.8036695 333 13 0.6155467 370 13 0.5818181 231 13 0.6730038 271 13 0.684524 44 3 0.522028 192 14 0.7248181 347 13 0.7272149 386 13 0.6798131 301 10 0.6364489 305 13 0.7963258 550 13 0.6995583 229 13 0.7229836 0.5862934 0.7184198 0.7229348 0.7444979 0.729801 0.6590380 0.6879126 0.7627672 0.7611029 0.6954727 0.6946673 0.7249703 0.7673513 0.7955771 0.7484290 0.7366859 0.6604779 0.6793621 0.6632494 0.7137382 0.8705737 0.7251714 0.7103066 0.7179963 0.7203437 0.71185541 0.815371 0.7105853 0.7086017 0.6634259 0.7276294 0.6659596 0.6637275 0.61698480 0.66453134 0.582449 0.6464765 0.7386617 0.7345115 0.6359585 0.7588130 0.7085642 8 0.7459668 0.724681 4.8685e-03 13 0.721992 0.752156 -0.03016439 3.7555e-01 5.6479e-01 insignificant 1.000000 1.000000 insignificant 0.96200674 0.54389250 insignificant 1.00000 1.00000 insignificant -0.01139863 0.5112606 insignificant 1.00000 insignificant 0.7460534 0.6336770 0.09203465 13 0.735231 0.6686487 0.0665818 5.9258e-08 9.9969e-01 weaklyHypermeth 6.1727e-07 1.0000e+00 weaklyHypermeth 2.9172e-03 9.9992e-01 weaklyHypermeth 2.6520e-02 1.0000e+00 weaklyHypermeth 0.0751391 5.6754e-02 insignificant 4.2200e-01 insignificant 0.7460191 0.7233202 -0.00031581 13 0.702344 0.7457941 -0.04345050 3.8335e-01 4.1434e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.4898e-01 8.1199e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.9000e-04 9.7576e-01 insignificant 1.0000000 insignificant 0.724681 0.6331727 0.08446216 13 0.7521564 0.6520812 0.10007526 1.0648e-06 1.0000e+00 weaklyHypermeth 1.1092e-05 1.0000e+00 weaklyHypermeth 3.9777e-04 1.0000e+00 weaklyHypermeth 4.3711e-03 1.0000e+00 weaklyHypermeth 0.0865377 3.6184e-02 weaklyHypermeth 2.7973e-01 insignificant 0.724126 0.7233202 -0.00451746 13 0.7084193 0.7457941 -0.03737474 5.4771e-01 4.2170e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.2602e-01 8.7677e-01 insignificant 1.0000e+00 1.00000000 insignificant 1.2289e-02 6.9982e-01 insignificant 1.0000000 insignificant 0.6320885 0.7233202 -8.7048e-02 13 0.6200955 0.7457941 -0.1256986 9.9991e-01 2.7937e-04 weaklyHypometh 1.0000e+00 2.9101e-03 weaklyHypometh 9.9975e-01 3.3540e-02 weaklyHypometh 1.0000e+00 2.6823e-01 insignificant -0.07424907 9.9837e-02 insignificant 6.4411e-01 insignificant chr9 134837817 134838817 34825 ENSG00000217892 0.7092471 806 15 0.633260 609 15 0.5512889 397 15 0.642006 614 13 0.606963 240 11 0.683687 859 15 0.580507 338 12 0.717278 452 14 0.6210110 446 14 0.6830925 313 15 0.671747 606 15 0.6885281 177 10 0.5426335 412 15 0.522448 285 8 0.6797465 567 15 0.6890150 165 10 0.8074074 54 5 0.6504960 997 13 0.6059160 564 14 0.658805 710 15 0.701047 224 15 0.6314741 178 9 0.5900138 474 13 0.6713101 334 12 0.713201 164 13 0.7015279 669 15 0.472052 384 15 0.632401 231 10 0.6742844 501 12 0.6048143 770 15 0.6409261 870 15 0.8044304 674 15 0.5325152 445 15 0.3216676 392 13 0.6551914 549 14 0.573743 54 4 0.516587 567 13 0.3763933 744 15 0.5208377 743 15 0.6846586 638 13 0.6416015 544 13 0.6728166 786 13 0.6841602 629 13 0.6629070 0.5162761 0.4839029 0.5916938 0.5586932 0.575729 0.5058772 0.5711989 0.5356947 0.5910019 0.6176539 0.6412391 0.4151414 0.5859704 0.5748568 0.6850464 0.5436583 0.5382957 0.4916338 0.5467184 0.5734799 0.5253710 0.5789377 0.6429213 0.6033720 0.5647919 0.48321550 0.606689 0.5376801 0.4752216 0.5585197 0.7668909 0.4319315 0.2412873 0.67979398 0.36996966 0.432672 0.2937060 0.5393169 0.5655973 0.5330525 0.5392672 0.6056296 9 0.5444329 0.551252 -1.0975e-02 15 0.701690 0.556456 0.14523464 9.8301e-01 5.7590e-01 insignificant 1.000000 1.000000 insignificant 0.86811447 0.77915263 insignificant 1.00000 1.00000 insignificant -0.00586933 0.8350499 insignificant 1.00000 insignificant 0.5442906 0.3576881 0.16640742 15 0.651972 0.4359216 0.2160503 6.4692e-17 9.9996e-01 weaklyHypermeth 1.0965e-15 1.0000e+00 weaklyHypermeth 1.6455e-09 9.9990e-01 weaklyHypermeth 4.0134e-08 1.0000e+00 weaklyHypermeth 0.1512379 2.9830e-02 weaklyHypermeth 2.4858e-01 insignificant 0.5442432 0.5149701 0.01679439 13 0.624194 0.5697178 0.05447621 5.2969e-01 5.3731e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.1199e-01 6.9446e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.4393e-03 8.5797e-01 insignificant 1.0000000 insignificant 0.551554 0.3576881 0.17550890 15 0.6491981 0.4359216 0.21327652 1.5936e-12 9.9996e-01 weaklyHypermeth 2.6125e-11 1.0000e+00 weaklyHypermeth 1.3463e-07 9.9997e-01 weaklyHypermeth 2.7476e-06 1.0000e+00 weaklyHypermeth 0.1571072 2.5714e-02 weaklyHypermeth 2.1429e-01 insignificant 0.551491 0.5149790 0.02759259 13 0.6481705 0.5738189 0.07435164 9.2050e-02 7.1832e-01 insignificant 9.7925e-01 1.0000e+00 insignificant 1.2750e-01 8.0720e-01 insignificant 1.0000e+00 1.00000000 insignificant 1.2309e-02 7.5858e-01 insignificant 1.0000000 insignificant 0.3578182 0.5149790 -1.3796e-01 13 0.4615640 0.5738189 -0.1122549 9.9998e-01 8.7474e-07 weaklyHypometh 1.0000e+00 1.2864e-05 weaklyHypometh 9.9968e-01 2.3157e-06 weaklyHypometh 1.0000e+00 7.4700e-05 weaklyHypometh -0.14479861 4.1256e-02 weaklyHypometh 3.5640e-01 insignificant chr9 134979617 134980617 34832 ENSG00000208511 0.9182596 303 11 0.834244 291 8 0.8708905 276 8 0.919308 354 11 0.882341 157 8 0.877482 347 8 0.900538 251 8 0.834988 225 8 0.8625195 299 8 0.9254886 394 8 0.873420 225 8 0.8233161 154 8 0.8362517 343 8 0.916012 156 5 0.9500008 329 8 0.8566468 122 8 0.8612013 63 7 0.6936156 337 10 0.7713860 150 6 0.938883 291 8 0.814430 164 8 0.8539343 231 8 0.8901720 336 8 0.9541855 80 6 0.938372 160 8 0.9257932 330 8 0.918683 227 8 0.877127 221 8 0.8885568 204 6 0.8985959 353 8 0.8993658 489 8 0.9401779 407 8 0.6510852 292 8 0.6333749 217 8 0.6576706 325 5 0.844620 104 8 0.789351 205 8 0.7882450 319 8 0.7436520 292 11 0.7006553 263 8 0.7609666 266 11 0.7108403 306 11 0.6637782 310 8 0.8922685 0.8343550 0.8581275 0.9072466 0.8695255 0.923919 0.8831365 0.8265092 0.8492639 0.9277389 0.8831397 0.8317207 0.8332378 0.8982658 0.9354191 0.8971124 0.8787664 0.8311726 0.7825016 0.9210767 0.9141018 0.8533010 0.8919914 0.8988896 0.9177862 0.9249758 0.90518796 0.904202 0.8678438 0.8907786 0.8816541 0.9351098 0.5905095 0.6351103 0.62518510 0.82298024 0.742191 0.8497162 0.8681694 0.8628337 0.8363257 0.8232163 0.8415390 8 0.8830856 0.905684 -2.1223e-02 8 0.899841 0.808516 0.09132545 9.9942e-01 6.2603e-02 insignificant 1.000000 1.000000 insignificant 0.99629543 0.03061392 weaklyHypometh 1.00000 1.00000 insignificant -0.03260975 0.0750294 insignificant 1.00000 insignificant 0.8830621 0.7072503 0.17718903 8 0.887321 0.7211997 0.1661217 9.3166e-14 9.9927e-01 weaklyHypermeth 1.2762e-12 1.0000e+00 weaklyHypermeth 3.4477e-05 9.9214e-01 weaklyHypermeth 4.4202e-04 1.0000e+00 weaklyHypermeth 0.1399486 1.0664e-02 weaklyHypermeth 1.0254e-01 insignificant 0.8819115 0.8204593 0.04109091 8 0.878188 0.7085008 0.16968701 5.1658e-06 9.9727e-01 weaklyHypermeth 2.3481e-04 1.0000e+00 weaklyHypermeth 3.4901e-03 9.8055e-01 weaklyHypermeth 1.0907e-01 1.0000e+00 insignificant 1.5136e-01 4.2237e-05 weaklyHypermeth 0.0052796 weaklyHypermeth 0.906250 0.7072503 0.20047396 8 0.9095802 0.7211997 0.18838056 5.3488e-13 9.9978e-01 hypermethylated 8.9147e-12 1.0000e+00 hypermethylated 1.0262e-05 9.9787e-01 hypermethylated 1.6035e-04 1.0000e+00 hypermethylated 0.1725583 4.2745e-03 weaklyHypermeth 4.8573e-02 weaklyHypermeth 0.906250 0.8523490 0.05747955 8 0.9095802 0.8598782 0.04970205 4.5769e-05 9.9262e-01 weaklyHypermeth 1.8117e-03 1.0000e+00 weaklyHypermeth 4.0067e-04 9.9716e-01 weaklyHypermeth 1.9356e-02 1.00000000 weaklyHypermeth 1.8397e-01 2.1176e-05 weaklyHypermeth 0.0070586 weaklyHypermeth 0.7072503 0.8523490 -1.4064e-01 8 0.7211997 0.8598782 -0.1386785 9.8758e-01 4.9482e-04 weaklyHypometh 1.0000e+00 4.8992e-03 weaklyHypometh 9.7611e-01 5.0101e-03 weaklyHypometh 1.0000e+00 5.5056e-02 weaklyHypometh 0.01141257 7.8685e-01 insignificant 1.0000e+00 insignificant chr9 135005617 135006617 34839 RALGDS ENSG00000160271 0.7650748 160 5 0.833939 259 5 0.7200514 139 3 0.942067 151 5 0.793557 138 5 0.871573 236 5 0.544719 128 5 0.865650 185 5 0.9364848 107 5 0.8456456 127 5 0.851858 273 10 0.6757370 42 3 0.8772276 169 5 0.976673 129 3 0.9041030 171 5 0.6500000 29 3 0.7500000 4 0 0.6323075 208 5 0.9292846 362 5 0.792227 183 5 0.691531 112 4 0.8675609 82 5 0.7887108 144 6 0.8538062 103 5 0.876640 104 10 0.8711576 257 5 0.754656 153 3 0.854012 92 5 0.9130829 337 5 0.9295112 362 10 0.9596423 449 7 0.9655550 180 5 0.8465710 178 5 0.6352073 138 5 1.0000000 119 7 1.000000 14 1 0.514887 155 5 0.8231814 329 5 0.9410623 174 5 0.8354855 182 5 0.8703846 130 5 0.7437928 213 5 0.9595238 153 5 0.9341208 0.8715888 0.8481232 0.9252117 0.8568655 0.826001 0.8751179 0.8864318 0.9426763 0.8981898 0.8685514 0.9331702 0.9682243 0.9269403 0.9501973 0.9051274 0.8713866 0.8919929 0.9146387 0.8675843 0.7117041 0.8436908 0.9205368 0.9257065 0.8852829 0.9100462 0.72591497 0.956728 0.9260196 0.9292576 0.9321029 0.9141994 0.8617478 0.7402505 0.96153700 1.00000000 0.760678 0.7071986 0.8869387 0.9467086 0.8870769 0.9281662 0.9516466 3 0.8940625 0.904421 -1.1632e-02 5 0.759627 0.748271 0.01135568 8.0512e-01 2.1372e-01 insignificant 1.000000 1.000000 insignificant 0.76421283 0.62421308 insignificant 1.00000 1.00000 insignificant -0.05257983 0.1463073 lowCoverage 1.00000 lowCoverage 0.8949015 0.8017149 0.10876566 5 0.818060 0.6978623 0.1201974 3.4730e-04 5.2751e-01 weaklyHypermeth 2.6113e-03 1.0000e+00 weaklyHypermeth 4.9961e-01 5.7346e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0046012 9.5805e-01 lowCoverage 1.0000e+00 lowCoverage 0.8945557 0.9154930 -0.01976338 5 0.779598 0.7734588 0.00613937 7.3479e-01 2.9727e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.2171e-01 4.7283e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -6.2141e-02 2.2059e-01 lowCoverage 1.0000000 lowCoverage 0.904722 0.8017149 0.10364217 5 0.7545485 0.6978623 0.05668620 5.3688e-03 7.3290e-01 weaklyHypermeth 3.7026e-02 1.0000e+00 weaklyHypermeth 3.4383e-01 4.9449e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0571810 5.1821e-01 lowCoverage 1.0000e+00 lowCoverage 0.905183 0.9154930 -0.00672921 5 0.8058305 0.7734588 0.03237171 1.4214e-02 6.3124e-01 inconclusive 2.1867e-01 1.0000e+00 insignificant 7.5410e-01 5.0997e-01 insignificant 1.0000e+00 1.00000000 insignificant -9.5610e-03 8.3935e-01 insignificant 1.0000000 insignificant 0.8034372 0.9165687 -1.3707e-01 5 0.7560175 0.8379137 -0.0818963 9.3475e-01 7.3531e-02 insignificant 1.0000e+00 4.4296e-01 insignificant 7.7816e-01 4.7430e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.06674200 4.7612e-01 lowCoverage 1.0000e+00 lowCoverage chr9 135346417 135347417 34845 SLC2A6 ENSG00000160326 0.8744620 210 7 0.792663 309 7 0.9042367 138 5 0.892211 185 7 0.992063 44 3 0.894706 262 7 0.812858 76 2 0.822705 220 8 0.8617657 117 6 0.8809593 114 4 0.911328 352 8 0.8977273 47 1 0.8929549 216 7 0.709586 79 6 0.9424326 88 3 0.9838710 34 1 0.9230769 26 1 0.5158560 265 8 0.9165847 272 8 0.724671 210 7 0.638072 128 8 0.8316767 96 4 0.9005682 85 3 0.8425926 125 7 0.875258 152 6 0.8291372 400 7 0.741613 111 7 0.734375 22 1 0.9220052 299 8 0.9532434 368 7 0.9035142 589 7 0.8836008 249 7 0.3237419 240 8 0.3555162 182 8 0.3492063 120 6 0.838095 29 2 0.393224 188 7 0.3954196 431 8 0.6506180 116 3 0.8277486 198 8 0.8601570 122 4 0.8802654 176 4 0.5532407 117 3 0.8650371 0.8162045 0.8660791 0.9736213 0.9562648 0.916976 0.8457112 0.9033445 0.8349145 0.9478123 0.8552861 0.8205544 0.9184815 0.8951359 0.8335695 0.9626601 NA 0.8240303 0.9198415 0.8491740 0.9788625 0.8496156 0.9045653 0.8687943 0.7953800 0.8716942 0.91188320 0.945565 0.9360589 0.9358223 0.8843636 0.8729558 0.6488952 0.3485304 0.83451537 0.78905666 0.864904 0.5163371 0.9232131 0.9281941 0.9400450 0.9142241 0.7538416 1 0.8781461 0.917652 -3.1965e-02 7 0.654785 0.677760 -0.02297431 9.9861e-01 8.6004e-02 insignificant 1.000000 1.000000 insignificant 0.99818725 0.30647639 insignificant 1.00000 1.00000 insignificant 0.01936458 0.5939908 insignificant 1.00000 insignificant 0.8791884 0.3650927 0.48553447 7 0.785742 0.2841473 0.5015952 2.4269e-42 1.0000e+00 hypermethylated 1.2773e-40 1.0000e+00 hypermethylated 1.0280e-11 1.0000e+00 hypermethylated 3.2126e-10 1.0000e+00 hypermethylated 0.4148021 2.5910e-03 weaklyHypermeth 3.2387e-02 weaklyHypermeth 0.8793846 0.8131868 0.03079147 5 0.857178 0.7855165 0.07166162 8.9885e-04 6.6300e-01 weaklyHypermeth 2.1923e-02 1.0000e+00 weaklyHypermeth 1.4939e-02 3.7528e-01 weaklyHypermeth 3.4743e-01 1.0000e+00 insignificant 1.0293e-01 1.9435e-01 lowCoverage 1.0000000 lowCoverage 0.918289 0.3658537 0.53664835 7 0.7466450 0.3341473 0.41249774 1.1819e-40 9.9998e-01 hypermethylated 7.8795e-39 1.0000e+00 hypermethylated 6.1973e-11 1.0000e+00 hypermethylated 2.5822e-09 1.0000e+00 hypermethylated 0.3954375 3.1604e-03 weaklyHypermeth 3.9175e-02 weaklyHypermeth 0.919312 0.8134431 0.06551812 5 0.8018278 0.8093480 -0.00752022 1.1894e-04 9.9036e-01 weaklyHypermeth 3.7931e-03 1.0000e+00 weaklyHypermeth 2.6091e-02 8.2525e-01 weaklyHypermeth 4.9982e-01 1.00000000 insignificant 8.3565e-02 2.8155e-01 lowCoverage 1.0000000 lowCoverage 0.3661616 0.8134431 -3.4047e-01 5 0.3712747 0.8093480 -0.4380733 1.0000e+00 2.6323e-13 hypomethylated 1.0000e+00 7.9766e-12 hypomethylated 1.0000e+00 1.9567e-05 hypomethylated 1.0000e+00 5.0172e-04 hypomethylated -0.31187210 1.4307e-02 lowCoverage 1.7884e-01 lowCoverage chr9 135361117 135362117 34846 SLC2A6 ENSG00000160326 0.8146557 243 10 0.718526 204 8 0.8488145 153 8 0.890227 305 10 0.886243 57 7 0.879948 329 10 0.778485 90 8 0.845795 204 9 0.9139267 121 8 0.8135606 126 8 0.932371 290 10 0.6944444 42 4 0.8365338 200 9 0.923702 120 6 0.8168437 152 8 0.7812500 41 5 0.8500000 13 0 0.7250501 238 9 0.9544055 219 9 0.936752 215 10 0.871190 103 7 0.8709663 147 9 0.8340665 119 10 0.9041511 133 9 0.868661 156 10 0.8990568 221 8 0.845052 156 9 0.708159 78 7 0.9177749 168 7 0.8542038 232 9 0.9207886 280 8 0.9199317 224 10 0.2321199 209 9 0.2445238 157 9 0.2522954 308 7 0.500098 174 5 0.230848 261 10 0.4478376 344 9 0.8202817 120 10 0.8114641 171 10 0.7921940 137 8 0.6816991 145 9 0.8590998 178 10 0.8352614 0.7846969 0.7815001 0.8826147 0.8379164 0.904545 0.7797861 0.8963099 0.9122081 0.8708289 0.9061810 0.6905229 0.8436474 0.9220756 0.7836624 0.7764815 0.8226385 0.7488620 0.9433515 0.9255309 0.8743884 0.8383871 0.8792475 0.9410466 0.8749551 0.8429188 0.87026205 0.833475 0.8674976 0.8677046 0.8796304 0.9247255 0.1780114 0.2327511 0.28126377 0.53227878 0.200116 0.5359631 0.8484908 0.8182054 0.7491152 0.7185956 0.8565709 6 0.8554432 0.879960 -2.0778e-02 10 0.823855 0.884809 -0.06095371 6.4732e-01 1.4646e-01 insignificant 1.000000 1.000000 insignificant 0.68059269 0.15079343 insignificant 1.00000 1.00000 insignificant -0.02575672 0.2898753 insignificant 1.00000 insignificant 0.8554432 0.2506887 0.58165957 10 0.823855 0.3154448 0.5084106 9.8332e-58 1.0000e+00 hypermethylated 8.9393e-56 1.0000e+00 hypermethylated 3.8529e-18 1.0000e+00 hypermethylated 3.5027e-16 1.0000e+00 hypermethylated 0.5241231 4.9231e-05 hypermethylated 1.1722e-03 hypermethylated 0.8554432 0.8109188 0.04901314 10 0.823855 0.7366258 0.08722951 2.8359e-03 8.6330e-01 weaklyHypermeth 5.6719e-02 1.0000e+00 weaklyHypermeth 8.7578e-03 9.2033e-01 weaklyHypermeth 2.4548e-01 1.0000e+00 insignificant 4.9129e-02 1.9632e-01 insignificant 1.0000000 insignificant 0.879960 0.2506887 0.60704864 10 0.8848091 0.3154448 0.56936428 3.0210e-50 1.0000e+00 hypermethylated 2.5175e-48 1.0000e+00 hypermethylated 2.9035e-16 1.0000e+00 hypermethylated 2.4196e-14 1.0000e+00 hypermethylated 0.5498798 3.7630e-05 hypermethylated 9.6486e-04 hypermethylated 0.879960 0.8109188 0.06886611 10 0.8848091 0.7366258 0.14818322 3.3632e-04 7.0128e-01 weaklyHypermeth 9.6092e-03 1.0000e+00 weaklyHypermeth 7.7783e-04 8.3274e-01 weaklyHypermeth 3.1296e-02 1.00000000 weaklyHypermeth 7.4886e-02 6.7027e-02 insignificant 1.0000000 insignificant 0.2506887 0.8109188 -5.1301e-01 10 0.3154448 0.7366258 -0.4211811 9.9997e-01 1.9384e-22 hypomethylated 1.0000e+00 1.0769e-20 hypomethylated 1.0000e+00 2.7894e-10 hypomethylated 1.0000e+00 1.9924e-08 hypomethylated -0.47499402 3.9022e-05 hypomethylated 2.2954e-03 hypomethylated chr9 135368817 135369817 34848 SLC2A6 ENSG00000160326 0.8196906 596 21 0.667798 320 16 0.7195360 279 16 0.851392 456 21 0.785967 185 14 0.825870 719 20 0.761754 275 15 0.836920 312 16 0.7432109 228 15 0.8225794 301 16 0.879886 495 16 0.7948446 174 12 0.7759110 319 16 0.750577 96 7 0.9052790 307 11 0.8415686 130 8 0.6985284 1098 14 0.8450644 528 20 0.8717028 341 16 0.862741 610 21 0.899221 135 10 0.7995370 145 14 0.8483902 385 21 0.7137468 193 16 0.930899 108 13 0.8536086 501 21 0.857741 229 11 0.885094 136 8 0.6965675 224 13 0.8275949 486 21 0.7499396 514 21 0.8323342 731 21 0.5410855 315 16 0.5506274 277 16 0.6727719 285 14 0.548698 114 11 0.574506 196 11 0.6856966 525 21 0.7755588 617 20 0.8040509 655 21 0.7893283 572 20 0.8374215 464 20 0.7936615 619 20 0.8680372 0.7556241 0.7841401 0.9171786 0.8257361 0.873013 0.8230187 0.8695053 0.8070152 0.9059743 0.8733203 0.8720041 0.8537260 0.8350584 0.9043299 0.8611937 0.7606792 0.8024390 0.8832265 0.8639326 0.8925302 0.8547657 0.8323648 0.8017721 0.9606110 0.8331059 0.85425989 0.879202 0.7728220 0.8778785 0.8428542 0.8767384 0.4495542 0.4445933 0.48445229 0.52702404 0.471553 0.5682482 0.8861263 0.8772725 0.8814914 0.9035477 0.7460275 6 0.8316169 0.846580 -8.0457e-03 21 0.760784 0.791789 -0.03100554 9.2939e-01 2.1452e-01 insignificant 1.000000 1.000000 insignificant 0.99441023 0.09289385 insignificant 1.00000 1.00000 insignificant -0.02151528 0.4061662 insignificant 1.00000 insignificant 0.8334411 0.5081776 0.30923955 17 0.798107 0.6498723 0.1482347 1.2557e-44 9.9154e-01 hypermethylated 7.8481e-43 1.0000e+00 hypermethylated 3.9727e-10 9.9895e-01 hypermethylated 1.1035e-08 1.0000e+00 hypermethylated 0.2074767 1.3181e-04 hypermethylated 2.8045e-03 hypermethylated 0.8315708 0.8452340 -0.00404511 20 0.752827 0.7743966 -0.02156930 6.3701e-01 2.7194e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.5464e-01 9.8000e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 3.0368e-03 8.6559e-01 insignificant 1.0000000 insignificant 0.846766 0.5081776 0.30709043 17 0.7866798 0.6498723 0.13680753 4.9249e-33 9.9708e-01 hypermethylated 1.8942e-31 1.0000e+00 hypermethylated 3.4121e-10 9.9995e-01 hypermethylated 1.0663e-08 1.0000e+00 hypermethylated 0.2289920 3.2231e-05 hypermethylated 8.4819e-04 hypermethylated 0.847009 0.8452340 0.00652941 20 0.8174491 0.7743966 0.04305248 4.5331e-02 1.9083e-01 weaklyHypermeth 5.7381e-01 1.0000e+00 insignificant 1.7522e-01 4.8040e-01 insignificant 1.0000e+00 1.00000000 insignificant 2.4552e-02 3.1113e-01 insignificant 1.0000000 insignificant 0.5078994 0.8450994 -3.0124e-01 16 0.6476817 0.7594628 -0.1117811 9.9988e-01 1.6266e-16 hypomethylated 1.0000e+00 6.2563e-15 hypomethylated 9.9997e-01 1.4028e-07 hypomethylated 1.0000e+00 6.3762e-06 hypomethylated -0.20443995 2.9009e-04 hypomethylated 1.0360e-02 hypomethylated chr9 135710317 135711317 34850 SARDH ENSG00000123453 0.9283232 445 13 0.784017 358 15 0.8728657 464 14 0.933947 363 13 0.946190 227 15 0.955431 536 14 0.912095 259 15 0.922956 359 15 0.8502892 300 14 0.9480398 319 12 0.927178 664 15 0.8970552 245 10 0.9441500 513 14 0.986761 98 3 0.9314016 366 13 0.8022346 209 5 0.9209425 754 9 0.9272474 363 11 0.9317434 417 14 0.894495 527 13 0.921081 172 14 0.9348919 85 3 0.8147022 327 15 0.9474067 213 13 0.719234 90 4 0.9459449 528 15 0.883818 231 14 0.887634 120 9 0.9420366 340 14 0.9115906 448 14 0.9428822 600 15 0.9638282 564 15 0.9494682 346 15 0.8602689 407 14 0.9254023 218 7 0.841270 53 4 0.724852 228 14 0.9221324 566 15 0.9004886 435 13 0.8979835 503 14 0.8134307 389 9 0.7844316 703 13 0.9269279 412 14 0.9173210 0.7941838 0.8759198 0.9369550 0.9458493 0.956594 0.8983206 0.9385226 0.8184207 0.9473382 0.9346026 0.9401012 0.9275026 0.9408980 0.9191669 0.7871715 0.9053782 0.9109658 0.9163394 0.9415620 0.9154042 0.9209337 0.9142845 0.9486812 0.8410480 0.9540766 0.91825790 0.891662 0.9463030 0.9184713 0.9384917 0.9626522 0.9593849 0.9139901 0.91142511 0.85820414 0.915227 0.9294512 0.9056039 0.9107740 0.8998199 0.8955587 0.9129760 1 0.9258926 0.933029 -1.1462e-02 14 0.914687 0.779157 0.13552997 9.8503e-01 2.1128e-01 insignificant 1.000000 1.000000 insignificant 0.72103543 0.23267676 insignificant 1.00000 1.00000 insignificant 0.00961393 0.6827264 insignificant 1.00000 insignificant 0.9258926 0.9173098 0.00318914 14 0.914687 0.8306538 0.0840328 1.4930e-01 3.5165e-01 insignificant 7.4650e-01 1.0000e+00 insignificant 7.0049e-01 1.9558e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0403026 2.9877e-01 insignificant 1.0000e+00 insignificant 0.9258831 0.9098730 0.02051481 13 0.909668 0.8200426 0.08962554 1.5998e-02 9.5263e-01 weaklyHypermeth 2.6227e-01 1.0000e+00 insignificant 5.0519e-02 9.1148e-01 insignificant 8.7826e-01 1.0000e+00 insignificant 4.6216e-02 1.7824e-01 insignificant 1.0000000 insignificant 0.933029 0.9173098 0.01321282 14 0.7791566 0.8306538 -0.05149722 3.9456e-01 4.9188e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3991e-01 4.1120e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0306887 4.5581e-01 insignificant 1.0000e+00 insignificant 0.933280 0.9098730 0.03299865 13 0.8249893 0.8200426 0.00494675 8.9992e-04 9.8829e-01 weaklyHypermeth 2.3075e-02 1.0000e+00 weaklyHypermeth 1.0169e-02 9.2463e-01 weaklyHypermeth 2.6760e-01 1.00000000 insignificant 3.6602e-02 3.1528e-01 insignificant 1.0000000 insignificant 0.9173098 0.9095004 1.4493e-02 13 0.8306538 0.7744847 0.0561691 2.0111e-01 8.7841e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.1493e-01 9.8683e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00591307 8.9518e-01 insignificant 1.0000e+00 insignificant chr9 135799417 135800417 34853 SARDH ENSG00000123453 0.7990947 199 6 0.724820 168 6 0.7374432 112 6 0.891028 197 6 0.671975 41 4 0.904939 278 6 0.836735 28 2 0.836710 180 6 0.8339161 92 6 0.7750458 109 6 0.882399 281 7 0.6400000 16 2 0.9592406 227 6 0.840902 117 6 0.8392121 113 6 0.2916667 15 0 NA 0 0 0.6353091 285 6 0.9051446 297 6 0.920340 239 6 0.827275 118 6 0.5185185 56 3 0.9095200 131 6 0.8266291 101 6 0.796605 67 3 0.8768113 333 6 0.619627 229 6 0.725108 33 3 0.9330172 296 6 0.9078205 294 6 0.8453619 410 6 0.9126910 286 6 0.8719611 135 6 0.7533994 184 6 0.4000000 169 4 0.333333 7 0 0.665258 123 6 0.8786592 277 6 0.6333623 95 6 0.5594862 181 6 0.7870269 84 5 0.6744570 92 5 0.7457614 98 6 0.7620405 0.7666399 0.6993154 0.8766280 0.6213817 0.888877 0.8023810 0.8180602 0.8221119 0.8859135 0.8655499 0.6379956 0.9465892 0.7658238 0.8116727 0.3950000 NA 0.5797615 0.8722943 0.9175514 0.8628365 0.6594167 0.8501248 0.7933772 0.9021667 0.8705226 0.71684249 0.925555 0.8804439 0.9010901 0.9315005 0.9014505 0.9405591 0.8825416 0.33728067 0.57515291 0.669987 0.9239640 0.5964590 0.5731265 0.7110449 0.6454298 0.6300824 1 0.8209753 0.861878 -4.3134e-02 6 0.896131 0.741243 0.15488873 8.7010e-01 5.5273e-01 insignificant 1.000000 1.000000 insignificant 0.96301557 0.21664469 insignificant 1.00000 1.00000 insignificant -0.02267387 0.6592577 lowCoverage 1.00000 lowCoverage 0.8207358 0.8111732 0.02037396 6 0.857181 0.6338745 0.2233062 6.2187e-02 3.4331e-01 insignificant 3.3797e-01 1.0000e+00 insignificant 3.5015e-01 2.9060e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.1351397 2.3048e-01 lowCoverage 1.0000e+00 lowCoverage 0.8208556 0.6775956 0.14456212 6 0.873050 0.6405467 0.23250282 1.7256e-06 9.9877e-01 weaklyHypermeth 8.6281e-05 1.0000e+00 weaklyHypermeth 4.4224e-02 9.7398e-01 weaklyHypermeth 7.8971e-01 1.0000e+00 insignificant 1.0556e-01 7.3717e-02 lowCoverage 0.8989882 lowCoverage 0.862069 0.8111732 0.05116697 6 0.7692087 0.6338745 0.13533421 2.8556e-02 4.9668e-01 weaklyHypermeth 1.7519e-01 1.0000e+00 insignificant 1.4726e-01 9.2486e-01 insignificant 8.7653e-01 1.0000e+00 insignificant 0.1578136 1.7115e-01 lowCoverage 9.8581e-01 lowCoverage 0.862804 0.6775956 0.18601375 6 0.7670744 0.6405467 0.12652771 1.5119e-08 9.7992e-01 weaklyHypermeth 1.2600e-06 1.0000e+00 weaklyHypermeth 1.9994e-03 9.9829e-01 weaklyHypermeth 7.4051e-02 1.00000000 weaklyHypermeth 1.2823e-01 3.9257e-02 weaklyHypermeth 0.8352531 insignificant 0.8120805 0.6782450 1.5248e-01 6 0.7244280 0.6807029 0.0437251 1.2235e-02 9.9910e-01 weaklyHypermeth 8.1564e-01 1.0000e+00 insignificant 1.8032e-01 7.9950e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02958364 7.8454e-01 lowCoverage 1.0000e+00 lowCoverage chr9 135910717 135911717 34855 BRD3 ENSG00000169925 0.7109091 81 5 0.706754 240 10 0.6435786 234 9 0.951389 56 4 0.774287 230 9 0.761055 116 5 0.614078 246 9 0.768412 192 9 0.6489697 200 10 0.7759850 217 9 0.778855 350 9 0.7479925 201 8 0.6555323 286 9 0.840643 37 2 0.9049539 233 8 0.5661616 145 8 0.5647495 148 8 0.8725855 90 3 0.8308718 309 9 0.665212 101 7 0.750624 166 10 0.8443750 48 2 0.6808688 116 8 0.6979084 139 7 0.676136 44 2 0.7708971 237 10 0.595897 139 10 0.595031 120 10 0.7037149 240 9 0.8141510 273 9 0.8056862 318 10 0.7664769 110 9 0.2736876 320 10 0.1969551 297 9 0.3800676 228 7 0.111111 24 2 0.220357 212 12 0.3276994 266 10 0.7233560 38 3 0.6563361 70 2 0.7903409 50 4 0.8565324 46 3 0.6755556 65 4 0.9352648 0.8096516 0.7255489 0.9372919 0.8393148 0.844989 0.7556841 0.8951381 0.7961630 0.9097945 0.8762207 0.9567844 0.9070741 0.8397731 0.8924780 0.8541018 0.7328841 0.8487233 0.8986133 0.9342012 0.8709948 0.8648131 0.9068817 0.8680448 0.7936845 0.9032610 0.87843339 0.808479 0.8989806 0.8976420 0.8836888 0.8363907 0.1413164 0.1763901 0.17414425 0.05221616 0.121588 0.1683786 0.8100059 0.7955961 0.8186066 0.8795317 0.6652129 2 0.8483297 0.854359 -1.3204e-02 9 0.639792 0.616602 0.02319028 6.0706e-01 5.7149e-01 insignificant 1.000000 1.000000 insignificant 0.81809408 0.25706843 insignificant 1.00000 1.00000 insignificant 0.01400150 0.6804676 insignificant 1.00000 insignificant 0.8483297 0.1870824 0.62468858 9 0.639792 0.2085512 0.4312407 8.1853e-79 1.0000e+00 hypermethylated 1.0232e-76 1.0000e+00 hypermethylated 2.5059e-12 1.0000e+00 hypermethylated 8.6410e-11 1.0000e+00 hypermethylated 0.4875024 2.0126e-06 hypermethylated 6.9399e-05 hypermethylated 0.8500810 0.7583643 0.08791764 3 0.735916 0.6963903 0.03952548 7.3645e-04 6.4276e-01 lowCoverage 1.8883e-02 1.0000e+00 lowCoverage 2.7064e-01 1.7303e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -1.2755e-03 9.7775e-01 lowCoverage 1.0000000 lowCoverage 0.854359 0.1870824 0.64920468 9 0.6166017 0.2085512 0.40805045 1.6127e-61 1.0000e+00 hypermethylated 2.0158e-59 1.0000e+00 hypermethylated 3.3053e-10 1.0000e+00 hypermethylated 1.0662e-08 1.0000e+00 hypermethylated 0.4735009 3.6234e-06 hypermethylated 1.3420e-04 hypermethylated 0.858320 0.7583643 0.09374203 3 0.7287111 0.6963903 0.03232081 7.9462e-05 6.1969e-01 lowCoverage 2.9430e-03 1.0000e+00 lowCoverage 1.1226e-01 2.1817e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage -1.5277e-02 7.3738e-01 lowCoverage 1.0000000 lowCoverage 0.1886228 0.7583643 -6.4319e-01 3 0.2464697 0.6963903 -0.4499206 1.0000e+00 6.6891e-23 lowCoverage 1.0000e+00 3.9348e-21 lowCoverage 1.0000e+00 8.2730e-08 lowCoverage 1.0000e+00 3.9395e-06 lowCoverage -0.48877795 8.4261e-06 lowCoverage 5.6174e-04 lowCoverage chr9 136375917 136376917 34860 RXRA ENSG00000186350 0.9629630 76 4 0.879179 120 6 0.8959586 107 6 0.909226 98 4 0.684295 82 6 0.908405 139 4 0.757597 100 6 0.895368 146 7 0.9336554 61 5 0.7467532 84 4 0.771980 220 7 0.5217836 42 3 0.5947148 95 4 0.777778 49 2 0.7883453 92 4 0.9259259 63 3 0.0000000 3 0 0.9587538 105 2 0.9166698 143 5 0.925067 91 3 0.849143 92 6 0.7225885 72 5 0.9076190 76 6 0.5793651 67 5 0.805133 134 5 0.9404412 138 6 0.807666 101 3 0.654630 44 4 0.8773625 112 4 0.9259387 152 7 0.8996967 184 6 0.8972475 101 4 0.3684559 142 6 0.2626984 144 5 0.4852574 85 3 0.540309 148 4 0.467094 125 6 0.4705416 212 6 0.9257272 114 4 0.7123349 113 4 0.9509744 72 2 0.5842114 90 3 0.8506173 59 5 0.8931624 0.7705725 0.8242999 0.9323904 0.7866042 0.846448 0.8978072 0.8816450 0.9446612 0.8484848 0.8873946 0.6990553 0.8774865 0.9027778 0.8776074 0.8290598 NA 0.9097951 0.9085824 0.8520565 0.8197453 0.8334977 0.9113248 0.7613324 0.8878614 0.9246481 0.81946400 0.820845 0.8637927 0.8420652 0.8504480 0.8590274 0.3024176 0.4362027 0.40770648 0.82776565 0.330030 0.6297753 0.9019711 0.8644355 0.8859961 0.8614001 0.8242165 2 0.8679541 0.870662 -2.3479e-03 5 0.692874 0.856336 -0.16346170 9.7401e-01 2.8326e-01 insignificant 1.000000 1.000000 insignificant 0.89712054 0.27215177 insignificant 1.00000 1.00000 insignificant -0.03451503 0.5678028 lowCoverage 1.00000 lowCoverage 0.8679541 0.3574766 0.48488673 5 0.692874 0.4806271 0.2122471 4.8664e-29 1.0000e+00 hypermethylated 1.4747e-27 1.0000e+00 hypermethylated 2.2120e-07 9.9793e-01 hypermethylated 4.0962e-06 1.0000e+00 hypermethylated 0.3553281 2.2686e-05 lowCoverage 5.8170e-04 lowCoverage 0.8684073 0.8568233 0.01051755 4 0.762162 0.7149689 0.04719264 4.1944e-02 7.0890e-01 lowCoverage 5.9855e-01 1.0000e+00 lowCoverage 2.7909e-01 3.9582e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -1.7052e-02 8.4571e-01 lowCoverage 1.0000000 lowCoverage 0.870662 0.3574766 0.49674527 5 0.8563358 0.4806271 0.37570876 2.2414e-26 9.9959e-01 hypermethylated 7.2305e-25 1.0000e+00 hypermethylated 1.9584e-07 9.9995e-01 hypermethylated 3.7661e-06 1.0000e+00 hypermethylated 0.3898432 1.0398e-05 hypermethylated 3.2493e-04 hypermethylated 0.867034 0.8549107 0.00546542 4 0.7654267 0.6499717 0.11545500 4.0124e-01 1.0777e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 1.8248e-01 1.9362e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 1.7463e-02 8.2724e-01 lowCoverage 1.0000000 lowCoverage 0.3571429 0.8568233 -4.8072e-01 4 0.4786898 0.7149689 -0.2362791 9.7188e-01 1.1672e-11 lowCoverage 1.0000e+00 3.2423e-10 lowCoverage 9.9934e-01 3.5866e-04 lowCoverage 1.0000e+00 5.6040e-03 lowCoverage -0.37238036 2.7132e-03 lowCoverage 5.4311e-02 lowCoverage chr9 136405017 136406017 34863 RXRA ENSG00000186350 0.9798323 373 8 0.830173 172 8 0.9665179 74 8 0.965167 281 8 0.881571 103 8 0.980327 302 8 0.975000 91 8 0.623102 100 8 0.9722222 69 8 0.9625000 103 5 0.682469 215 8 1.0000000 21 1 0.9696691 67 4 0.670862 72 8 0.9759615 99 5 0.9303977 59 4 NA 0 0 0.8456195 575 8 0.9321963 217 8 0.970906 310 8 0.541667 41 2 0.8748007 130 4 0.8824100 179 8 0.9921875 87 8 0.995968 199 8 0.7593431 188 8 0.913366 124 8 0.866667 35 2 0.9610798 183 8 0.9318634 184 8 0.7481712 227 8 0.9686906 261 8 0.9511742 165 8 0.9015650 248 8 0.9974490 234 8 1.000000 32 1 0.822294 111 8 0.7679779 336 8 0.7833889 334 8 0.9660288 336 8 0.9573149 300 8 0.9512825 477 8 0.9600761 238 8 0.9704916 0.8227627 0.9500288 0.9648743 0.8691515 0.985305 0.9642857 0.9361577 0.9623656 0.9478495 0.9237642 0.9993200 0.9478771 0.9165219 0.9661911 0.9391867 NA 0.9339060 0.8955940 0.9667619 0.8390457 0.8824053 0.9022697 0.9843750 0.9919355 0.9400507 0.93869222 0.822581 0.9513869 0.9218190 0.9201800 0.9569922 0.9505743 0.8556145 0.99489796 NA 0.874964 0.9647339 0.9682943 0.9676782 0.9590257 0.9558570 0.9377094 1 0.9400545 0.939410 2.4354e-03 8 0.631471 0.739201 -0.10773019 7.2989e-01 8.0500e-01 insignificant 1.000000 1.000000 insignificant 0.47321038 0.72334821 insignificant 1.00000 1.00000 insignificant 0.03107839 0.5110848 insignificant 1.00000 insignificant 0.9409091 0.9493333 -0.00060919 8 0.688877 0.7804547 -0.0915774 7.4958e-01 3.1958e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.5006e-01 5.9243e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0059806 9.0181e-01 insignificant 1.0000e+00 insignificant 0.9431956 0.9601901 -0.01713975 8 0.947206 0.9630512 -0.01584493 9.5900e-01 6.9916e-02 insignificant 1.0000e+00 8.7395e-01 insignificant 8.0741e-01 2.6568e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -2.2855e-02 6.1775e-01 insignificant 1.0000000 insignificant 0.939477 0.9484902 -0.00427946 8 0.7808677 0.7154168 0.06545086 8.6425e-01 6.0239e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.9736e-01 4.9892e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0370590 5.0637e-01 insignificant 1.0000e+00 insignificant 0.941918 0.9601901 -0.01983186 8 0.9421348 0.9630512 -0.02091631 9.7810e-01 1.7795e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.7478e-01 1.0338e-01 insignificant 1.0000e+00 1.00000000 insignificant -5.3934e-02 3.1638e-01 insignificant 1.0000000 insignificant 0.9509367 0.9601901 -1.2015e-02 8 0.9481252 0.9630512 -0.0149259 7.4755e-01 4.7210e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.9144e-01 5.2190e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01687480 7.5475e-01 insignificant 1.0000e+00 insignificant chr9 136438326 136439326 34864 RXRA ENSG00000186350 0.7897110 127 7 0.649830 53 5 0.7078219 102 4 0.649189 78 4 0.545238 34 3 0.746753 103 6 0.667469 93 4 0.848639 65 6 0.8338450 73 6 0.8481241 83 6 0.888134 139 7 0.6219246 70 7 0.5257333 108 7 0.809783 39 2 0.4304176 59 4 0.7727273 32 3 0.8352273 40 3 0.4784580 75 7 0.6788095 130 7 0.758418 68 4 0.877914 66 6 0.2128427 27 2 0.7705424 97 7 0.9285714 41 2 0.845238 19 1 0.8512173 141 7 0.656195 50 4 0.782738 36 4 0.8097181 143 7 0.7307834 158 7 0.7812630 163 7 0.9002268 103 5 0.0072250 180 7 0.0167920 166 7 0.0000000 146 6 0.000000 32 4 0.131757 63 2 0.0000000 218 7 0.3485926 124 7 0.3720526 141 7 0.5142857 67 7 0.4953283 171 7 0.2586580 86 7 0.8083711 0.7435647 0.7844746 0.6970975 0.5025157 0.870283 0.8088340 0.8855571 0.8969959 0.8707023 0.9400390 0.7108715 0.5262591 0.7892574 0.5783851 0.7854473 0.8423347 0.5399072 0.7156447 0.8340577 0.8373239 0.3527254 0.7891842 0.9433962 0.7374214 0.8597700 0.70349160 0.862033 0.7595974 0.7555368 0.7671090 0.8655361 0.0139774 0.0100463 0.00000000 0.00000000 0.028047 0.0000000 0.4158730 0.3341624 0.5387841 0.5243036 0.4081618 1 0.7638447 0.783525 -2.3019e-02 6 0.636438 0.810836 -0.17439831 9.6658e-01 9.5421e-02 insignificant 1.000000 1.000000 insignificant 0.93383887 0.07522798 insignificant 1.00000 1.00000 insignificant -0.05795817 0.3630234 lowCoverage 1.00000 lowCoverage 0.7638447 0.0086957 0.75571224 6 0.636438 0.1312637 0.5051740 1.9573e-52 1.0000e+00 hypermethylated 1.3981e-50 1.0000e+00 hypermethylated 2.0302e-17 1.0000e+00 hypermethylated 1.6918e-15 1.0000e+00 hypermethylated 0.6783504 8.4358e-15 hypermethylated 2.8119e-12 hypermethylated 0.7638447 0.4278438 0.31547363 6 0.636438 0.4744459 0.16199176 1.5482e-15 1.0000e+00 hypermethylated 3.8705e-13 1.0000e+00 hypermethylated 1.8379e-09 1.0000e+00 hypermethylated 6.1265e-07 1.0000e+00 hypermethylated 3.0653e-01 7.6671e-04 hypermethylated 0.0383357 hypermethylated 0.783525 0.0086957 0.77397954 7 0.8108360 0.1312637 0.67957233 3.9042e-51 1.0000e+00 hypermethylated 3.9042e-49 1.0000e+00 hypermethylated 8.4071e-14 1.0000e+00 hypermethylated 5.2545e-12 1.0000e+00 hypermethylated 0.7363086 5.4795e-09 lowCoverage 6.1272e-07 lowCoverage 0.783525 0.4278438 0.36441427 7 0.8108360 0.4744459 0.33639008 4.1493e-17 1.0000e+00 hypermethylated 1.3831e-14 1.0000e+00 hypermethylated 4.5093e-08 1.0000e+00 hypermethylated 1.5031e-05 1.00000000 hypermethylated 3.6449e-01 2.2304e-04 lowCoverage 0.0247826 lowCoverage 0.0086957 0.4278438 -4.2280e-01 7 0.1312637 0.4744459 -0.3431822 1.0000e+00 8.9293e-18 hypomethylated 1.0000e+00 3.7205e-16 hypomethylated 1.0000e+00 1.8388e-09 hypomethylated 1.0000e+00 1.1492e-07 hypomethylated -0.37182115 5.3338e-04 hypomethylated 1.7206e-02 hypomethylated chr9 136439826 136440826 34865 RXRA ENSG00000186350 0.9284827 292 8 0.973909 113 7 0.9311544 160 8 0.969501 259 8 0.754329 126 7 0.740285 448 8 0.904911 148 8 0.808235 127 7 0.8937399 157 8 0.9550257 222 8 0.932856 227 8 0.9831746 140 8 0.8894321 194 8 0.861097 131 8 0.8691171 249 8 0.8447293 110 8 0.8000000 23 4 0.9499947 517 8 0.9474086 305 8 0.967150 408 8 0.777778 69 5 0.9496528 61 6 0.9611465 157 8 0.6409790 143 8 0.770833 43 2 0.9523080 210 8 0.732381 115 6 0.722300 112 8 0.8529998 285 7 0.9647126 176 7 0.9223668 215 8 0.9736241 437 8 0.8751634 198 7 0.8050860 309 8 0.6036619 196 6 0.944444 30 4 0.773612 195 7 0.8864559 234 7 0.8603183 398 8 0.9110243 365 8 0.9808239 219 8 0.9874402 643 8 0.9636521 287 8 0.9329484 0.9809930 0.9454181 0.9660431 0.9511155 0.944389 0.9209833 0.9213820 0.8878899 0.9473655 0.9446901 0.9882452 0.8896509 0.9747776 0.9824584 0.9221684 0.9749873 0.9578864 0.9431607 0.9668148 1.0000000 0.9640748 0.9641416 0.8516326 0.7795276 0.9446883 0.92252531 0.883855 0.9490145 0.9596525 0.9318359 0.9643612 0.8443713 0.8544804 0.80195029 0.89127012 0.934775 0.9204833 0.9644291 0.9559191 0.9863323 0.9796087 0.9630980 3 0.9407441 0.930624 7.2244e-03 8 0.698808 0.792305 -0.09349648 7.8983e-01 9.7016e-01 insignificant 1.000000 1.000000 insignificant 0.96613071 0.57350740 insignificant 1.00000 1.00000 insignificant 0.04346979 0.2653100 insignificant 1.00000 insignificant 0.9411630 0.7808456 0.14451235 8 0.732033 0.7073820 0.0246510 6.3109e-06 9.7564e-01 weaklyHypermeth 5.7371e-05 1.0000e+00 weaklyHypermeth 1.0003e-01 8.8094e-01 insignificant 6.2263e-01 1.0000e+00 insignificant 0.0804893 1.6889e-01 insignificant 1.0000e+00 insignificant 0.9411900 0.9659508 -0.02748651 8 0.782141 0.9265065 -0.14436515 9.9995e-01 3.7480e-02 weaklyHypometh 1.0000e+00 6.2375e-01 insignificant 9.9978e-01 4.3080e-02 weaklyHypometh 1.0000e+00 8.4471e-01 insignificant -4.5425e-02 1.5769e-01 insignificant 1.0000000 insignificant 0.929243 0.7805508 0.11850792 8 0.7698196 0.6754771 0.09434247 4.7145e-03 9.9823e-01 weaklyHypermeth 3.2969e-02 1.0000e+00 weaklyHypermeth 2.0782e-01 9.9868e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0370195 5.4830e-01 insignificant 1.0000e+00 insignificant 0.931514 0.9659329 -0.03569347 8 0.7734231 0.9198253 -0.14640218 9.9924e-01 5.6855e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9803e-01 9.8825e-02 insignificant 1.0000e+00 1.00000000 insignificant -8.8895e-02 5.0039e-02 insignificant 0.9098058 insignificant 0.7813310 0.9669291 -1.8523e-01 8 0.7281202 0.9784745 -0.2503543 9.9996e-01 3.8305e-03 weaklyHypometh 1.0000e+00 3.0630e-02 weaklyHypometh 9.9980e-01 2.0438e-02 weaklyHypometh 1.0000e+00 1.8248e-01 insignificant -0.12591447 5.3530e-02 insignificant 4.0998e-01 insignificant chr9 136444926 136445926 34866 RXRA ENSG00000186350 0.8885103 181 5 0.860042 84 5 0.7458300 92 5 0.915227 162 5 0.778571 31 4 0.918931 181 5 0.857143 36 5 0.940923 111 5 0.9048951 57 5 0.9005848 83 5 0.908402 104 5 0.8666667 10 1 0.9343561 145 5 NA 0 0 0.9555556 42 5 0.7666667 26 4 0.8416667 35 4 0.4225648 157 5 0.9800000 56 5 0.771998 221 5 0.890397 89 5 0.7933333 48 5 0.9226580 97 5 0.9800000 46 5 0.613333 51 5 0.7145100 169 5 0.842484 79 5 1.000000 23 3 0.8440269 182 5 0.9537952 265 5 0.9172444 233 5 0.9196039 213 5 0.1716402 126 5 0.0936111 76 5 0.5527426 81 1 0.013889 28 2 0.514545 30 3 0.4770476 119 5 0.6146421 139 5 0.6951154 217 5 0.7782722 144 5 0.7385281 113 5 0.5249880 176 5 0.8896685 0.8591823 0.7462954 0.9153045 0.7841340 0.904736 0.8710493 0.9388700 0.8939910 0.8958236 0.9025680 0.8525074 0.9326478 NA 0.9596853 0.7625369 0.8303835 0.4276497 0.9778761 0.8746744 0.8875685 0.7931170 0.9108682 0.9814159 0.6165192 0.8593710 0.83810515 1.000000 0.8436328 0.9533962 0.9135397 0.9185180 0.1705296 0.0927974 NA 0.01843658 0.507683 0.4774716 0.6147917 0.6905854 0.7788280 0.7383251 0.4395325 1 0.8536720 0.895442 -3.9815e-02 5 0.849557 0.892128 -0.04257068 9.6705e-01 4.8488e-02 weaklyHypometh 1.000000 0.932456 insignificant 0.25824094 0.53690874 insignificant 1.00000 1.00000 insignificant -0.01549962 0.7232357 lowCoverage 1.00000 lowCoverage 0.8532819 0.3362445 0.52562131 5 0.791297 0.4273342 0.3639633 1.0505e-21 9.9903e-01 hypermethylated 2.2351e-20 1.0000e+00 hypermethylated 1.2024e-10 9.9991e-01 hypermethylated 3.5366e-09 1.0000e+00 hypermethylated 0.5465365 1.7590e-03 lowCoverage 2.3453e-02 lowCoverage 0.8536720 0.6421320 0.21168635 5 0.849557 0.6427589 0.20679803 1.3350e-06 1.0000e+00 hypermethylated 7.2119e-05 1.0000e+00 hypermethylated 1.2507e-06 1.0000e+00 hypermethylated 1.5633e-04 1.0000e+00 hypermethylated 1.8014e-01 1.0827e-02 lowCoverage 0.2518008 lowCoverage 0.894983 0.3333333 0.56966395 5 0.8545508 0.2606675 0.59388327 3.6937e-26 1.0000e+00 hypermethylated 1.1543e-24 1.0000e+00 hypermethylated 2.0648e-10 1.0000e+00 hypermethylated 6.8826e-09 1.0000e+00 hypermethylated 0.5620361 1.3960e-03 lowCoverage 2.0530e-02 lowCoverage 0.894983 0.6425856 0.25363581 5 0.8545508 0.7022991 0.15225170 5.0489e-13 9.9947e-01 hypermethylated 8.4149e-11 1.0000e+00 hypermethylated 3.9504e-07 9.9990e-01 hypermethylated 7.9008e-05 1.00000000 hypermethylated 1.9564e-01 7.4777e-03 lowCoverage 0.2492559 lowCoverage 0.3333333 0.6425856 -3.1356e-01 5 0.2606675 0.7022991 -0.4416316 1.0000e+00 8.4543e-06 hypomethylated 1.0000e+00 1.0702e-04 hypomethylated 1.0000e+00 2.7911e-05 hypomethylated 1.0000e+00 6.6776e-04 hypomethylated -0.36639652 1.1078e-02 lowCoverage 1.5175e-01 lowCoverage chr9 136505926 136506926 34869 ENSG00000214473 0.8581788 482 7 0.841853 279 7 0.7603363 98 7 0.788956 415 7 0.840144 71 6 0.841446 433 7 0.837900 185 7 0.878264 140 7 0.7942681 108 5 0.9636364 65 7 0.910078 218 7 0.7289377 36 2 0.8928571 90 5 0.901537 66 5 0.9115712 113 5 0.8367347 36 4 NA 0 0 0.7111881 924 7 0.9437175 257 7 0.895040 363 7 0.770748 64 6 0.7723077 83 4 0.9539110 198 7 0.8035714 29 2 0.808566 438 7 0.8938343 232 7 0.800238 82 7 0.708333 46 4 0.8403594 231 7 0.9245934 282 7 0.9006125 432 7 0.9086436 271 7 0.3281799 255 7 0.4041908 227 7 0.3333333 96 4 0.807059 173 6 0.438333 230 8 0.8604035 428 7 0.8593574 342 7 0.8542191 387 7 0.7624895 362 7 0.9000059 416 7 0.8599010 341 7 0.9289710 0.8873396 0.8294248 0.9047813 0.9415152 0.877258 0.8659402 0.9065371 0.8885672 0.9670330 0.9270873 0.6997041 0.9381868 0.8759282 0.9229609 0.8728414 NA 0.8202245 0.9536961 0.9082072 0.8501570 0.7807270 0.9439743 0.8701923 0.9101499 0.9051503 0.85867216 0.890110 0.8906781 0.9376794 0.9232081 0.9213875 0.3621579 0.4132874 0.31797602 0.88868793 0.524119 0.8951596 0.9152212 0.9025024 0.9048367 0.9090334 0.8732913 3 0.9007319 0.903266 -2.3016e-02 7 0.791212 0.780917 0.01029484 9.6066e-01 6.6097e-02 insignificant 1.000000 1.000000 insignificant 0.85422851 0.33320694 insignificant 1.00000 1.00000 insignificant 0.00882053 0.7456113 insignificant 1.00000 insignificant 0.9011215 0.6025641 0.27750383 7 0.848447 0.5563420 0.2921049 6.8240e-16 1.0000e+00 hypermethylated 1.1006e-14 1.0000e+00 hypermethylated 1.3742e-05 1.0000e+00 hypermethylated 1.9085e-04 1.0000e+00 hypermethylated 0.3207139 2.1749e-02 weaklyHypermeth 1.9078e-01 insignificant 0.9007319 0.8836580 -0.01348339 7 0.791212 0.7669442 0.02426785 9.4296e-01 3.0372e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.6792e-01 8.7543e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.1025e-03 9.4127e-01 insignificant 1.0000000 insignificant 0.903645 0.6025641 0.31422301 7 0.8785319 0.5563420 0.32218985 2.0256e-12 1.0000e+00 hypermethylated 3.1650e-11 1.0000e+00 hypermethylated 3.8135e-05 1.0000e+00 hypermethylated 5.2966e-04 1.0000e+00 hypermethylated 0.3118934 2.3705e-02 weaklyHypermeth 2.0089e-01 insignificant 0.903266 0.8836580 0.01459424 7 0.7809172 0.7669442 0.01397300 6.7519e-01 9.2542e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.2866e-01 9.9508e-01 insignificant 1.0000e+00 1.00000000 insignificant -6.7180e-03 8.3443e-01 insignificant 1.0000000 insignificant 0.6025641 0.8841364 -2.9086e-01 7 0.5563420 0.8628122 -0.3064702 1.0000e+00 6.5001e-06 hypomethylated 1.0000e+00 8.5528e-05 hypomethylated 9.9996e-01 4.6095e-03 weaklyHypometh 1.0000e+00 5.1792e-02 weaklyHypometh -0.31861137 2.1869e-02 weaklyHypometh 2.2641e-01 insignificant chr9 136534326 136535326 34870 ENSG00000214473 0.9069853 162 5 0.865739 174 5 0.7453920 253 5 0.985714 141 5 0.972478 174 5 0.905827 292 5 0.884383 196 5 0.854716 181 5 0.9026090 182 5 0.7996100 281 5 0.932372 191 5 0.9185967 139 5 0.7608626 216 5 0.891853 185 5 0.9100989 336 5 0.8933788 223 5 0.5555556 6 0 0.7217709 202 5 0.8713009 271 5 0.785666 163 5 0.832842 125 5 0.6653846 128 5 0.8080808 120 5 0.9093561 102 5 0.869630 63 5 0.8680377 238 5 0.678917 171 5 0.732708 113 5 0.7040613 214 5 0.9064773 328 5 0.8331688 324 5 0.9132965 134 5 0.3882604 213 5 0.2828283 80 5 0.3479003 500 5 0.320000 16 2 0.241721 216 5 0.3009231 265 5 0.8865387 191 5 0.7760943 125 5 0.8726882 141 5 0.7658880 145 5 0.6778317 159 5 0.9072923 0.8994493 0.7288655 0.9852433 0.9710718 0.907414 0.8890628 0.9216397 0.9132607 0.9557744 0.9312235 0.9154297 0.7455074 0.8853941 0.9037181 0.9037103 0.6416425 0.6474422 0.8678841 0.9449084 0.9611164 0.7788673 0.9627040 0.9092487 0.8724353 0.8613577 0.88094854 0.865856 0.8386180 0.8802415 0.8246838 0.9634033 0.2298410 0.2909091 0.27263094 0.27428571 0.251673 0.2579341 0.8814409 0.8197469 0.8352329 0.7535128 0.8018187 5 0.8855847 0.870262 9.9873e-03 5 0.822269 0.783910 0.03835885 4.0361e-01 8.1477e-01 insignificant 1.000000 1.000000 insignificant 0.39486630 0.61515316 insignificant 1.00000 1.00000 insignificant 0.04308207 0.2270363 lowCoverage 1.00000 lowCoverage 0.8855847 0.2449612 0.60987745 5 0.822269 0.3016627 0.5206062 1.9483e-41 1.0000e+00 hypermethylated 9.7414e-40 1.0000e+00 hypermethylated 3.6534e-10 9.9998e-01 hypermethylated 1.0438e-08 1.0000e+00 hypermethylated 0.5396398 1.9178e-12 lowCoverage 3.8357e-10 lowCoverage 0.8855847 0.8331143 0.05197784 5 0.822269 0.7782037 0.04406525 8.6028e-02 7.0746e-01 insignificant 9.8882e-01 1.0000e+00 insignificant 7.5732e-03 8.5598e-01 weaklyHypermeth 2.2274e-01 1.0000e+00 insignificant 5.7437e-02 2.3661e-01 lowCoverage 1.0000000 lowCoverage 0.870262 0.2449612 0.61409744 5 0.7839101 0.3016627 0.48224738 9.0518e-39 9.9983e-01 hypermethylated 5.6574e-37 1.0000e+00 hypermethylated 1.7998e-09 9.9898e-01 hypermethylated 4.9537e-08 1.0000e+00 hypermethylated 0.4965578 1.4178e-10 lowCoverage 3.5445e-08 lowCoverage 0.870262 0.8331143 0.04394821 5 0.7839101 0.7782037 0.00570640 4.2402e-02 8.0373e-01 weaklyHypermeth 5.5068e-01 1.0000e+00 insignificant 1.9473e-02 8.8778e-01 weaklyHypermeth 4.1471e-01 1.00000000 insignificant 1.4355e-02 7.6589e-01 insignificant 1.0000000 insignificant 0.2449612 0.8331143 -5.3421e-01 5 0.3016627 0.7782037 -0.4765410 1.0000e+00 5.9664e-25 hypomethylated 1.0000e+00 3.9776e-23 hypomethylated 1.0000e+00 8.1846e-07 hypomethylated 1.0000e+00 2.9254e-05 hypomethylated -0.48220260 2.3758e-05 lowCoverage 1.4849e-03 lowCoverage chr9 136575726 136576726 34871 ENSG00000214473 0.6443524 71 4 0.599279 84 6 0.6759259 26 2 0.736111 33 3 0.390873 23 1 0.766775 30 2 0.377778 13 2 0.617749 38 3 0.6262626 35 3 0.6476190 19 3 0.814435 89 6 0.2333333 9 1 0.2471861 73 3 0.833333 5 0 0.4370370 28 3 0.5000000 12 2 0.3888889 10 0 0.1389610 38 3 0.4008725 59 5 0.449346 67 3 0.938462 26 1 0.4739316 38 3 0.1755952 22 3 0.3690476 47 4 0.686471 171 4 0.3405298 117 6 0.564491 44 3 0.583333 17 1 0.7099359 42 4 0.6074023 85 6 0.5688734 150 6 0.8845238 72 6 0.3545214 76 6 0.4845454 139 6 1.0000000 123 4 0.580375 106 4 0.558333 32 3 0.6025327 106 6 0.3306818 73 6 0.5885816 76 4 0.5138889 21 2 0.4525717 44 4 0.3780423 76 6 0.6472380 0.4823622 0.5483092 0.6630435 0.3146998 0.678007 0.3623188 0.4447581 0.6113307 0.6211180 0.6814970 0.2217391 0.2402597 NA 0.4782609 0.4778864 0.4275362 0.1375494 0.3755342 0.3759591 0.9331104 0.0652174 0.2396480 0.4337474 0.6598017 0.4360531 0.53145164 0.557971 0.5380435 0.5284679 0.5223847 0.7996894 0.1618357 0.3388754 0.76300897 0.39459816 0.554348 0.6569565 0.1902174 0.3476186 0.2391304 0.3350155 0.1794341 1 0.5098555 0.557298 -1.9783e-02 3 0.496055 0.560040 -0.06398536 9.2133e-01 8.7153e-01 lowCoverage 1.000000 1.000000 lowCoverage 0.95049615 0.48194360 lowCoverage 1.00000 1.00000 lowCoverage -0.04891044 0.5338646 lowCoverage 1.00000 lowCoverage 0.5098814 0.5687285 0.01576924 3 0.495491 0.6131991 -0.1177082 4.3582e-01 6.7734e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 4.8000e-01 6.5153e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0704120 4.9883e-01 lowCoverage 1.0000e+00 lowCoverage 0.5105541 0.3586207 0.17984370 3 0.578073 0.4234880 0.15458479 3.6418e-04 9.9065e-01 lowCoverage 1.2070e-02 1.0000e+00 lowCoverage 1.3245e-03 9.6164e-01 lowCoverage 5.0942e-02 1.0000e+00 lowCoverage 7.3553e-02 2.7341e-01 lowCoverage 1.0000000 lowCoverage 0.553528 0.5687285 0.02166997 6 0.4971885 0.6131991 -0.11601064 3.5514e-01 6.3330e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.0641e-01 5.2953e-01 insignificant 6.4885e-01 1.0000e+00 insignificant -0.0215015 8.4729e-01 lowCoverage 1.0000e+00 lowCoverage 0.555556 0.3586207 0.18237512 6 0.5800532 0.4234880 0.15656527 8.3608e-04 9.7289e-01 weaklyHypermeth 2.2002e-02 1.0000e+00 weaklyHypermeth 5.1691e-03 9.6290e-01 weaklyHypermeth 1.6674e-01 1.00000000 insignificant 1.2246e-01 1.3920e-01 lowCoverage 1.0000000 lowCoverage 0.5679862 0.3586207 1.5740e-01 6 0.5487323 0.4234880 0.1252443 2.6570e-02 9.2142e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 1.3964e-01 8.2404e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.14396463 1.9066e-01 lowCoverage 1.0000e+00 lowCoverage chr9 136622826 136623826 34873 ENSG00000214473 0.9336294 375 8 0.723216 171 9 0.6250166 169 8 0.933660 362 8 0.831224 104 8 0.949877 462 9 0.829885 218 6 0.818083 169 8 0.8292275 254 8 0.8410079 220 9 0.928512 230 8 0.9050356 129 6 0.8657405 257 7 0.730429 90 7 0.8124008 241 9 0.7658382 176 6 0.9050144 80 6 0.5548270 431 8 0.9160173 148 8 0.824917 329 8 0.941667 36 4 0.7441478 103 8 0.7818921 229 8 0.9482684 97 8 0.885562 140 8 0.7534754 206 8 0.711389 150 8 0.885064 94 6 0.9814402 216 8 0.8874025 221 8 0.8224922 357 8 0.8261277 294 8 0.0494676 286 8 0.1428571 220 8 0.3629630 79 3 0.025000 149 8 0.146190 225 8 0.0849246 335 9 0.8555501 400 8 0.8356668 269 8 0.6509731 287 8 0.6771695 341 8 0.8256348 341 8 0.9259016 0.7744522 0.8231155 0.9449563 0.8212716 0.963092 0.9079240 0.8729666 0.8536303 0.9443377 0.9139936 0.9011605 0.9100377 0.8393874 0.8991529 0.8464467 0.8951313 0.5244973 0.9262551 0.9136283 0.9234300 0.8035866 0.8637479 0.9339670 0.8685962 0.8223724 0.89022525 0.843870 0.9747448 0.9281293 0.8980573 0.9157327 0.0375669 0.0055210 0.05245709 0.01855072 0.028244 0.0111083 0.8631008 0.8174745 0.7276183 0.7441774 0.8521822 6 0.8539545 0.894860 -3.8164e-02 8 0.833208 0.851315 -0.01810660 9.8886e-01 3.9263e-02 weaklyHypometh 1.000000 0.834363 insignificant 0.97451782 0.02345218 weaklyHypometh 1.00000 1.00000 insignificant -0.02123270 0.5439091 insignificant 1.00000 insignificant 0.8539228 0.0432767 0.80246556 8 0.816529 0.1824902 0.6340390 1.6003e-93 9.9966e-01 hypermethylated 2.6671e-91 1.0000e+00 hypermethylated 5.5512e-19 9.9614e-01 hypermethylated 5.5512e-17 1.0000e+00 hypermethylated 0.6909442 3.0013e-06 hypermethylated 9.7260e-05 hypermethylated 0.8539228 0.7532071 0.06760073 8 0.816529 0.6367685 0.17976072 9.8397e-03 9.9945e-01 weaklyHypermeth 1.7263e-01 1.0000e+00 insignificant 1.1682e-03 9.9997e-01 weaklyHypermeth 4.8677e-02 1.0000e+00 weaklyHypermeth 5.7179e-02 2.8605e-01 insignificant 1.0000000 insignificant 0.894811 0.0432767 0.84932793 8 0.8364465 0.1824902 0.65395629 8.3850e-92 9.9852e-01 hypermethylated 1.3975e-89 1.0000e+00 hypermethylated 2.3486e-16 9.9915e-01 hypermethylated 2.1351e-14 1.0000e+00 hypermethylated 0.7121769 1.8593e-06 hypermethylated 8.0839e-05 hypermethylated 0.894024 0.7533578 0.10288487 8 0.7907090 0.6697896 0.12091938 9.3955e-08 9.9915e-01 weaklyHypermeth 7.2273e-06 1.0000e+00 weaklyHypermeth 2.6877e-05 9.9993e-01 weaklyHypermeth 2.4433e-03 1.00000000 weaklyHypermeth 7.8412e-02 1.6263e-01 insignificant 1.0000000 insignificant 0.0432767 0.7532071 -7.1878e-01 8 0.1824902 0.6367685 -0.4542783 9.9960e-01 5.7508e-48 hypomethylated 1.0000e+00 1.1502e-45 hypomethylated 9.9675e-01 1.2333e-10 hypomethylated 1.0000e+00 1.0278e-08 hypomethylated -0.63376514 4.9795e-06 hypomethylated 4.8411e-04 hypomethylated chr9 137156026 137157026 34885 OLFM1 ENSG00000130558 0.9215769 171 6 0.848023 145 6 0.7722468 97 6 0.955828 173 6 0.904968 86 6 0.885255 302 6 0.755266 82 3 0.828158 111 6 0.9484127 48 3 0.9190236 85 6 0.898875 251 6 0.8363636 56 6 0.8845060 183 6 0.936111 52 4 0.8941385 155 6 0.7338624 37 3 0.8705128 37 5 0.8803543 339 6 0.8971483 158 6 0.855612 283 6 0.958333 72 6 0.8909697 145 6 0.9496242 159 6 0.9267261 119 6 0.892974 89 6 0.9386496 231 6 0.711818 88 6 0.699660 52 5 0.9615669 101 6 0.9192500 250 6 0.9217477 280 6 0.9488224 316 6 0.7473357 117 6 0.5865385 122 6 0.7518519 336 6 0.771429 33 2 0.745868 232 6 0.8570100 186 6 0.9361598 213 6 0.8999417 287 6 0.9568663 149 6 0.7111111 60 2 0.8711127 323 6 0.9353653 0.8590598 0.7862772 0.9470167 0.8857406 0.884133 0.8181863 0.8539331 0.9285714 0.9350100 0.8865882 0.8652515 0.8841424 0.9256661 0.9051264 0.7666747 0.8446073 0.8794755 0.8765264 0.8820424 0.9403553 0.8940387 0.9500756 0.8712050 0.8342540 0.9447929 0.75112607 0.858920 0.9511745 0.9177671 0.9019986 0.9304561 0.7467039 0.6368850 0.80778342 0.65922663 0.755631 0.8485668 0.9488824 0.9093289 0.9515229 0.8983099 0.8699437 2 0.8779376 0.914737 -3.6340e-02 6 0.891315 0.927853 -0.03653875 9.9936e-01 2.4191e-03 weaklyHypometh 1.000000 0.279219 insignificant 0.99605536 0.04527562 weaklyHypometh 1.00000 1.00000 insignificant -0.02203302 0.4657499 insignificant 1.00000 insignificant 0.8778090 0.7816764 0.10901034 6 0.873200 0.7448832 0.1283173 9.2253e-09 8.6988e-01 weaklyHypermeth 1.0028e-07 1.0000e+00 weaklyHypermeth 8.0149e-04 8.1520e-01 weaklyHypermeth 8.1785e-03 1.0000e+00 weaklyHypermeth 0.1279733 1.3720e-02 weaklyHypermeth 1.2943e-01 insignificant 0.8779376 0.9021318 -0.02445314 6 0.891315 0.7719681 0.11934656 9.9356e-01 1.0450e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.1542e-01 1.5620e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -3.7262e-03 9.3825e-01 insignificant 1.0000000 insignificant 0.914647 0.7816764 0.14250694 6 0.9158290 0.7448832 0.17094584 3.8307e-08 9.9447e-01 weaklyHypermeth 4.2096e-07 1.0000e+00 weaklyHypermeth 1.4354e-03 9.3744e-01 weaklyHypermeth 1.4212e-02 1.0000e+00 weaklyHypermeth 0.1500063 6.5554e-03 weaklyHypermeth 7.1254e-02 weaklyHypermeth 0.914737 0.9021318 0.01190870 6 0.9278534 0.7719681 0.15588531 4.7333e-01 6.6005e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.5260e-01 6.6121e-01 insignificant 1.0000e+00 1.00000000 insignificant 1.8307e-02 7.2910e-01 insignificant 1.0000000 insignificant 0.7816764 0.9030068 -9.8304e-02 6 0.7448832 0.9006295 -0.1557463 9.9214e-01 1.8334e-04 weaklyHypometh 1.0000e+00 2.0147e-03 weaklyHypometh 9.8527e-01 2.9155e-03 weaklyHypometh 1.0000e+00 3.4708e-02 weaklyHypometh -0.13169952 4.6827e-02 weaklyHypometh 3.8071e-01 insignificant chr9 137165826 137166826 34887 OLFM1 ENSG00000130558 0.8595710 521 12 0.748868 314 12 0.6616436 403 12 0.912885 626 12 0.776813 293 12 0.766324 707 12 0.847864 338 12 0.757333 414 12 0.7730621 498 12 0.8858684 612 12 0.798108 360 12 0.7469112 296 12 0.8109889 648 12 0.821789 358 12 0.8666342 623 12 0.8077895 219 12 0.6489035 72 7 0.6492334 846 12 0.9083036 339 12 0.809352 381 12 0.730010 142 12 0.6385787 304 12 0.8646744 428 12 0.7974653 183 9 0.926652 201 12 0.8285834 493 12 0.855003 281 12 0.878428 229 12 0.7907278 321 12 0.9125821 504 12 0.7720669 617 12 0.8428947 512 13 0.0310382 519 12 0.0138575 198 12 0.1313462 766 9 0.041667 81 10 0.055610 399 12 0.0154880 556 12 0.7121740 517 12 0.6883565 510 12 0.7409429 561 12 0.6805582 541 12 0.6859705 495 12 0.8592772 0.8047511 0.6589437 0.9058946 0.8305449 0.894017 0.9134932 0.8856356 0.8323230 0.8833919 0.8690167 0.8084870 0.9010413 0.8140570 0.8651306 0.8553727 0.6281387 0.6898174 0.9056983 0.8730924 0.8687354 0.6680655 0.8616202 0.8681569 0.9184951 0.8830669 0.88941921 0.870567 0.8497851 0.8920708 0.8927739 0.9055748 0.0290743 0.0159450 0.08848607 0.04429722 0.069323 0.0176883 0.6658152 0.7223094 0.7305057 0.6532991 0.6473219 12 0.8453992 0.872300 -2.8961e-02 12 0.688107 0.795511 -0.10740415 9.9974e-01 1.7409e-04 weaklyHypometh 1.000000 0.034817 weaklyHypometh 0.99963074 0.02237416 weaklyHypometh 1.00000 1.00000 insignificant -0.02689310 0.3660640 insignificant 1.00000 insignificant 0.8454945 0.0349345 0.80865119 12 0.737258 0.0279381 0.7093197 1.9638e-161 1.0000e+00 hypermethylated 3.9277e-159 1.0000e+00 hypermethylated 3.3239e-27 1.0000e+00 hypermethylated 6.6478e-25 1.0000e+00 hypermethylated 0.7447445 4.4119e-15 hypermethylated 2.2060e-12 hypermethylated 0.8459542 0.6947409 0.15935680 12 0.781149 0.7069344 0.07421503 1.0136e-18 7.2097e-01 weaklyHypermeth 5.0678e-16 1.0000e+00 weaklyHypermeth 4.8361e-12 9.8336e-01 weaklyHypermeth 2.4180e-09 1.0000e+00 weaklyHypermeth 9.1312e-02 2.5441e-04 weaklyHypermeth 0.0195698 weaklyHypermeth 0.872477 0.0349345 0.83764096 12 0.8166194 0.0279381 0.78868132 2.4095e-128 1.0000e+00 hypermethylated 4.8190e-126 1.0000e+00 hypermethylated 3.9862e-25 1.0000e+00 hypermethylated 7.9725e-23 1.0000e+00 hypermethylated 0.7716376 1.9347e-14 hypermethylated 1.9347e-11 hypermethylated 0.873484 0.6947409 0.19072248 12 0.8666158 0.7069344 0.15968136 2.0327e-21 1.0000e+00 weaklyHypermeth 1.0164e-18 1.0000e+00 weaklyHypermeth 8.7916e-12 9.9991e-01 weaklyHypermeth 4.3958e-09 1.00000000 weaklyHypermeth 1.1820e-01 4.0134e-04 weaklyHypermeth 0.0401337 weaklyHypermeth 0.0349762 0.6947409 -6.4546e-01 12 0.0300872 0.7069344 -0.6768472 1.0000e+00 2.0912e-69 hypomethylated 1.0000e+00 6.9708e-67 hypomethylated 1.0000e+00 2.7459e-16 hypomethylated 1.0000e+00 4.5765e-14 hypomethylated -0.65343269 9.5911e-10 hypomethylated 9.5911e-07 hypomethylated chr9 137167826 137168826 34888 OLFM1 ENSG00000130558 0.8747479 297 8 0.640543 132 8 0.6829417 142 8 0.866591 281 8 0.795238 59 6 0.908660 336 8 0.674004 121 8 0.823156 161 8 0.7974984 149 6 0.9576389 107 6 0.917724 222 8 0.6918342 80 5 0.6683838 149 6 0.918954 33 2 0.8270802 96 6 0.7857143 24 2 0.6298611 81 5 0.5930300 251 7 0.7395925 157 8 0.879781 222 8 0.925309 98 7 0.8241854 139 6 0.8002206 120 6 0.8135457 95 8 0.894255 198 8 0.9330442 159 6 0.613314 93 6 0.847804 66 3 0.7400648 120 6 0.8098288 186 6 0.8442500 279 8 0.7882048 296 8 0.5185794 180 8 0.5066098 162 8 0.6348764 217 8 0.379633 152 7 0.540609 130 7 0.4883334 232 8 0.7918462 279 8 0.8519904 265 8 0.7521601 201 7 0.7189066 266 6 0.7987648 290 8 0.8319740 0.6851354 0.6629591 0.8850631 0.8746032 0.901176 0.8713427 0.8052449 0.8130907 0.9608804 0.8898461 0.6806643 0.7086740 0.7930228 0.7632017 0.7675888 0.7149081 0.7017684 0.7031670 0.8535819 0.8954306 0.7924759 0.8030022 0.9240295 0.8842050 0.9135539 0.69739343 0.786360 0.7598231 0.8209013 0.8320848 0.8693904 0.5024490 0.4962892 0.55507884 0.33777462 0.478507 0.3964220 0.8149578 0.8418259 0.7539672 0.6751130 0.8040312 5 0.8100000 0.835587 -2.5490e-02 8 0.758687 0.816372 -0.05768582 9.5710e-01 2.6707e-01 insignificant 1.000000 1.000000 insignificant 0.98110020 0.27962157 insignificant 1.00000 1.00000 insignificant -0.03585354 0.3172529 insignificant 1.00000 insignificant 0.8100000 0.4584500 0.34988378 8 0.758687 0.5444462 0.2142404 6.9170e-25 9.9987e-01 hypermethylated 1.7293e-23 1.0000e+00 hypermethylated 4.5328e-09 9.9907e-01 hypermethylated 1.0541e-07 1.0000e+00 hypermethylated 0.2722084 4.2782e-05 hypermethylated 1.0696e-03 hypermethylated 0.8110644 0.7501922 0.04008537 8 0.823358 0.7779465 0.04541177 3.1036e-02 6.9366e-01 weaklyHypermeth 4.6322e-01 1.0000e+00 insignificant 1.5355e-01 8.6294e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.1504e-04 9.7864e-01 insignificant 1.0000000 insignificant 0.835587 0.4584500 0.38156501 8 0.8163724 0.5444462 0.27192617 1.1890e-20 1.0000e+00 hypermethylated 2.7651e-19 1.0000e+00 hypermethylated 2.0145e-09 1.0000e+00 hypermethylated 5.3014e-08 1.0000e+00 hypermethylated 0.3080619 1.8574e-05 hypermethylated 5.1593e-04 hypermethylated 0.836679 0.7501922 0.06822882 8 0.8454655 0.7779465 0.06751904 4.6275e-04 9.2639e-01 weaklyHypermeth 1.2854e-02 1.0000e+00 weaklyHypermeth 1.2281e-02 9.6871e-01 weaklyHypermeth 2.9953e-01 1.00000000 insignificant 3.6769e-02 2.9302e-01 insignificant 1.0000000 insignificant 0.4577861 0.7501922 -3.1634e-01 8 0.4930578 0.7779465 -0.2848887 1.0000e+00 8.7097e-11 hypomethylated 1.0000e+00 2.0737e-09 hypomethylated 1.0000e+00 1.9281e-06 hypomethylated 1.0000e+00 6.4268e-05 hypomethylated -0.27129334 1.2464e-04 hypomethylated 6.2321e-03 hypomethylated chr9 137197926 137198926 34891 OLFM1 ENSG00000130558 0.9904762 100 4 0.873761 120 6 0.7161585 158 6 1.000000 69 4 0.895726 64 4 0.958016 145 4 0.924263 92 4 0.789446 57 4 0.8796685 65 4 0.9674620 64 4 0.932939 128 4 0.9282051 47 4 0.7368326 76 3 NA 0 0 0.9302346 63 4 0.9166667 38 2 0.8393939 37 3 0.7984169 44 4 0.9459770 75 4 0.815075 103 5 0.946667 53 4 0.9791667 29 2 0.9737350 98 6 0.9151515 56 3 0.811664 118 2 0.8919380 162 6 0.963636 51 4 0.983333 60 3 0.9772727 44 3 0.7954906 191 6 0.9542037 168 6 0.9492915 162 5 0.5090194 150 6 0.5106868 133 4 0.4875000 113 3 0.823457 103 4 0.645370 86 4 0.5197656 152 6 0.9876623 167 4 0.9654991 106 4 0.9500000 54 2 0.9365558 141 4 0.9679380 142 4 0.9710476 0.9555722 0.8045101 1.0000000 0.9434530 0.925432 0.9175692 0.9143768 0.9211354 0.9504888 0.8896919 0.9053949 0.8603636 NA 0.9125658 0.9573333 0.9379167 0.9005221 0.9202146 0.9109001 0.8810667 0.9853333 0.9507655 0.8860606 0.9535533 0.9518663 0.97672727 0.994133 0.9840000 0.9266159 0.9534463 0.9532308 0.6941441 0.4344058 0.88993579 0.77449374 0.750311 0.8825678 0.9786286 0.9369360 0.8696000 0.9135622 0.9094868 1 0.8988327 0.943745 -4.8629e-02 5 0.758215 0.826902 -0.06868694 1.0000e+00 2.9431e-04 weaklyHypometh 1.000000 0.049052 weaklyHypometh 0.99987867 0.01600511 weaklyHypometh 1.00000 1.00000 insignificant -0.04221419 0.1233046 lowCoverage 1.00000 lowCoverage 0.8988327 0.6227951 0.23958618 5 0.758215 0.5085262 0.2496890 2.8345e-15 9.9998e-01 hypermethylated 4.2946e-14 1.0000e+00 hypermethylated 2.3659e-06 1.0000e+00 hypermethylated 3.8160e-05 1.0000e+00 hypermethylated 0.3036151 1.4712e-03 lowCoverage 2.0433e-02 lowCoverage 0.8993506 0.9393443 -0.03281590 4 0.844287 0.9665695 -0.12228262 9.9161e-01 1.8737e-04 lowCoverage 1.0000e+00 1.3384e-02 lowCoverage 9.7008e-01 1.3212e-02 lowCoverage 1.0000e+00 4.2621e-01 lowCoverage -7.5283e-02 1.5598e-03 lowCoverage 0.0678175 lowCoverage 0.943697 0.6222826 0.30270669 5 0.8021739 0.4383156 0.36385822 4.9940e-21 9.9994e-01 hypermethylated 1.2181e-19 1.0000e+00 hypermethylated 7.7849e-08 1.0000e+00 hypermethylated 1.6924e-06 1.0000e+00 hypermethylated 0.3458293 7.5089e-04 lowCoverage 1.2515e-02 lowCoverage 0.944491 0.9393443 0.00911687 4 0.9358695 0.9665695 -0.03070003 7.0444e-01 2.4986e-02 lowCoverage 1.0000e+00 7.8083e-01 lowCoverage 5.1816e-01 2.0809e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage -3.3069e-02 1.2812e-01 lowCoverage 1.0000000 lowCoverage 0.6231293 0.9393443 -2.1791e-01 4 0.5113683 0.9665695 -0.4552013 9.9998e-01 8.1214e-17 lowCoverage 1.0000e+00 3.2485e-15 lowCoverage 1.0000e+00 8.0198e-06 lowCoverage 1.0000e+00 2.4302e-04 lowCoverage -0.37889783 7.4031e-04 lowCoverage 2.1704e-02 lowCoverage chr9 137247626 137248626 34892 ENSG00000189363 0.7679728 370 7 0.753353 184 7 0.8182540 193 8 0.929933 357 7 0.734389 91 5 0.780447 477 7 0.882609 46 3 0.829945 165 7 0.7876749 142 7 0.9460192 186 7 0.932523 273 7 0.6779514 93 6 0.7549495 179 7 0.936639 104 5 0.7472353 171 7 0.7009804 58 4 0.8214286 30 3 0.8899345 500 7 0.9195828 208 7 0.782899 342 7 0.768612 60 4 0.8197751 90 4 0.6659407 216 7 0.6361820 105 6 0.658027 97 5 0.9323207 195 7 0.710298 134 4 0.637706 63 6 0.9465877 248 7 0.9597908 302 7 0.7458678 469 7 0.8343036 371 7 0.4854492 278 7 0.3831252 213 7 0.8421554 167 4 0.561905 46 3 0.442976 215 7 0.6217337 268 7 0.9167036 404 7 0.8989586 234 7 0.9123359 291 7 0.8297258 327 7 0.7922094 320 7 0.8374418 0.7849945 0.8922456 0.9113482 0.8358801 0.882452 0.8451354 0.8965386 0.7989740 0.9110592 0.9350096 0.7401810 0.9435171 0.9466903 0.8915832 0.7112665 0.8251538 0.8097358 0.8964574 0.8760895 0.9218224 0.8492901 0.8971118 0.8913837 0.7935751 0.9319203 0.91205113 0.839271 0.9217301 0.9449243 0.9450056 0.9097227 0.3942213 0.3523474 0.79087768 0.50936768 0.654505 0.7326975 0.8865048 0.8945709 0.9100739 0.9450344 0.8623711 4 0.8755097 0.905532 -3.3962e-02 7 0.635320 0.691593 -0.05627335 9.9924e-01 1.4687e-02 weaklyHypometh 1.000000 0.565848 insignificant 0.93676196 0.05447217 insignificant 1.00000 1.00000 insignificant 0.04345182 0.2904124 insignificant 1.00000 insignificant 0.8755097 0.5366470 0.32878550 7 0.635320 0.4099229 0.2253971 1.1582e-25 1.0000e+00 hypermethylated 3.0480e-24 1.0000e+00 hypermethylated 2.7384e-07 1.0000e+00 hypermethylated 4.9790e-06 1.0000e+00 hypermethylated 0.2635120 9.5383e-03 weaklyHypermeth 9.3513e-02 weaklyHypermeth 0.8778259 0.9149746 -0.03128110 7 0.698852 0.7418592 -0.04300715 9.4983e-01 9.8265e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 7.4469e-01 5.8820e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -5.0251e-02 1.4216e-01 insignificant 1.0000000 insignificant 0.905532 0.5366470 0.36465437 7 0.6915934 0.4099229 0.28167050 4.7611e-19 1.0000e+00 hypermethylated 1.0580e-17 1.0000e+00 hypermethylated 6.0211e-07 1.0000e+00 hypermethylated 1.1150e-05 1.0000e+00 hypermethylated 0.2200602 1.9753e-02 weaklyHypermeth 1.7481e-01 insignificant 0.906303 0.9149746 0.00161321 7 0.7607528 0.7418592 0.01889354 6.0047e-01 7.6298e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.3988e-01 9.8733e-01 insignificant 1.0000e+00 1.00000000 insignificant -9.3702e-02 4.6471e-02 weaklyHypometh 0.8936674 insignificant 0.5370995 0.9149746 -3.7439e-01 7 0.4509152 0.7418592 -0.2909440 1.0000e+00 3.7123e-09 hypomethylated 1.0000e+00 7.7339e-08 hypomethylated 1.0000e+00 7.6783e-05 hypomethylated 1.0000e+00 1.6161e-03 hypomethylated -0.31376264 4.0059e-03 weaklyHypometh 7.4183e-02 weaklyHypometh chr9 137500126 137501126 34895 ENSG00000219768 0.7969475 398 7 0.685162 450 12 0.6002831 332 11 0.592986 357 7 0.660746 116 10 0.723627 696 11 0.723626 250 12 0.662834 422 12 0.6555988 253 9 0.7709362 277 10 0.794257 379 12 0.4525753 141 9 0.8345470 379 11 0.587424 130 8 0.7368231 269 10 0.4090909 45 4 0.4744286 107 8 0.6589629 524 10 0.8975479 313 11 0.765870 550 11 0.708333 80 7 0.5809969 186 10 0.6533548 214 8 0.6486512 179 11 0.682650 174 11 0.7674589 512 12 0.696107 166 11 0.627385 154 10 0.7582370 347 11 0.8254896 534 11 0.8211045 415 9 0.6948463 404 10 0.1425700 429 9 0.1289165 196 11 0.3999582 329 8 0.083333 57 6 0.217895 343 11 0.1724604 429 9 0.7944550 356 7 0.6798432 531 10 0.7255857 580 10 0.3312311 379 7 0.6619423 531 11 0.8110043 0.7991586 0.5866337 0.8750378 0.7926809 0.743623 0.8458857 0.7196735 0.7613991 0.8119660 0.8027695 0.5121849 0.8642753 0.6722086 0.7791439 0.5569771 0.6067795 0.6694952 0.9092997 0.8321132 0.9178404 0.6275586 0.6972955 0.8385895 0.7427562 0.8588718 0.77028746 0.668036 0.7876732 0.8801298 0.8419539 0.8636002 0.0633722 0.0226040 0.07462939 0.03211268 0.116563 0.0780419 0.8621175 0.6590778 0.7065168 0.3806825 0.7016461 6 0.7615842 0.805052 -4.5511e-02 12 0.695884 0.735415 -0.03953132 9.9682e-01 9.3446e-03 weaklyHypometh 1.000000 0.491820 insignificant 0.97918595 0.05608902 insignificant 1.00000 1.00000 insignificant -0.03117079 0.3931941 insignificant 1.00000 insignificant 0.7615842 0.1873247 0.60302491 12 0.695884 0.2229266 0.4729571 2.4026e-62 1.0000e+00 hypermethylated 2.6696e-60 1.0000e+00 hypermethylated 6.1806e-17 1.0000e+00 hypermethylated 4.7543e-15 1.0000e+00 hypermethylated 0.4833581 6.8920e-06 hypermethylated 1.9691e-04 hypermethylated 0.7620241 0.6453513 0.11919769 10 0.737207 0.6865688 0.05063845 1.0273e-04 8.4950e-01 weaklyHypermeth 4.0031e-03 1.0000e+00 weaklyHypermeth 2.0344e-02 8.4017e-01 weaklyHypermeth 4.4225e-01 1.0000e+00 insignificant 3.5602e-02 6.9296e-01 insignificant 1.0000000 insignificant 0.805052 0.1873247 0.63058930 12 0.7354149 0.2229266 0.51248838 1.9744e-56 1.0000e+00 hypermethylated 2.1938e-54 1.0000e+00 hypermethylated 8.2321e-17 1.0000e+00 hypermethylated 8.2321e-15 1.0000e+00 hypermethylated 0.5145289 1.3484e-05 hypermethylated 3.9658e-04 hypermethylated 0.807394 0.6453513 0.16086876 10 0.7891238 0.6865688 0.10255495 6.7670e-07 9.6888e-01 weaklyHypermeth 4.8336e-05 1.0000e+00 weaklyHypermeth 5.8116e-03 9.3037e-01 weaklyHypermeth 1.8161e-01 1.00000000 insignificant 6.6773e-02 4.6107e-01 insignificant 1.0000000 insignificant 0.1874299 0.6453513 -4.6800e-01 10 0.2415038 0.6865688 -0.4450650 1.0000e+00 4.1578e-24 hypomethylated 1.0000e+00 2.5986e-22 hypomethylated 1.0000e+00 2.1882e-10 hypomethylated 1.0000e+00 1.6832e-08 hypomethylated -0.44775587 2.3071e-03 weaklyHypometh 4.9087e-02 weaklyHypometh chr9 137500726 137501726 34896 ENSG00000219768 0.7509419 126 3 0.694678 268 8 0.5943240 166 7 0.497623 148 3 0.631076 69 6 0.704817 336 7 0.646147 173 8 0.711717 294 8 0.5728741 135 5 0.7367401 143 6 0.787637 184 8 0.4032567 80 5 0.8023990 232 7 0.597917 86 6 0.7016556 165 6 0.3000000 22 2 0.3912698 45 5 0.5606014 290 6 0.8723635 206 7 0.702970 299 7 0.562500 39 3 0.6272177 123 6 0.5904075 110 4 0.6927983 80 7 0.601071 121 7 0.8078106 331 8 0.667889 108 7 0.702857 68 6 0.8202772 201 7 0.9030754 316 7 0.8203758 183 5 0.5929717 124 6 0.1725926 155 5 0.1963719 118 7 0.5142320 208 6 0.114286 45 5 0.245532 209 7 0.2110795 167 5 0.7007833 159 3 0.6707564 319 6 0.7140326 336 6 0.2468927 133 3 0.5792029 267 7 0.7070158 0.7635184 0.5555521 0.8342321 0.9017385 0.704562 0.7960707 0.6788517 0.7508301 0.7960114 0.8043197 0.4484192 0.8138792 0.7213152 0.7511432 0.6907825 0.6841046 0.5699234 0.8877267 0.7536495 0.8015873 0.5591963 0.6080798 0.9156434 0.5542528 0.8421885 0.78590283 0.670093 0.7896963 0.8798618 0.7932504 0.8157531 0.0364360 0.0250108 0.10974858 0.02721088 0.070569 0.0548856 0.7454573 0.6315212 0.6862192 0.3776052 0.5581173 2 0.7317566 0.770510 -4.0915e-02 8 0.707181 0.763628 -0.05644789 9.8768e-01 2.6433e-02 weaklyHypometh 1.000000 0.691190 insignificant 0.95030008 0.07364970 insignificant 1.00000 1.00000 insignificant -0.06605388 0.1649848 insignificant 1.00000 insignificant 0.7317566 0.2771619 0.49493917 8 0.707181 0.3162826 0.3908980 8.6578e-28 1.0000e+00 hypermethylated 2.5464e-26 1.0000e+00 hypermethylated 1.0171e-08 9.9996e-01 hypermethylated 2.2602e-07 1.0000e+00 hypermethylated 0.3907015 2.6737e-04 hypermethylated 5.0447e-03 hypermethylated 0.7317566 0.5971993 0.13701457 6 0.707181 0.6707483 0.03643230 6.2010e-04 5.4292e-01 weaklyHypermeth 1.6759e-02 1.0000e+00 weaklyHypermeth 1.9018e-02 6.1802e-01 weaklyHypermeth 4.2383e-01 1.0000e+00 insignificant 5.0717e-02 6.0849e-01 insignificant 1.0000000 insignificant 0.770510 0.2771619 0.52338701 8 0.7636285 0.3162826 0.44734584 5.4737e-24 1.0000e+00 hypermethylated 1.4794e-22 1.0000e+00 hypermethylated 4.9839e-09 1.0000e+00 hypermethylated 1.2779e-07 1.0000e+00 hypermethylated 0.4567554 9.6861e-05 hypermethylated 2.2014e-03 hypermethylated 0.770510 0.5971993 0.17240246 6 0.7636285 0.6707483 0.09288019 1.3937e-04 8.0936e-01 weaklyHypermeth 4.2232e-03 1.0000e+00 weaklyHypermeth 2.5260e-02 7.1008e-01 weaklyHypermeth 4.9530e-01 1.00000000 insignificant 1.1677e-01 2.6310e-01 insignificant 1.0000000 insignificant 0.2771619 0.5971993 -3.3037e-01 6 0.3162826 0.6707483 -0.3544656 9.9996e-01 1.0580e-12 hypomethylated 1.0000e+00 3.1118e-11 hypomethylated 1.0000e+00 1.7617e-05 hypomethylated 1.0000e+00 4.6359e-04 hypomethylated -0.33998469 1.3457e-02 weaklyHypometh 1.7034e-01 insignificant chr9 137984026 137985026 34904 CAMSAP1 ENSG00000130559 0.9068627 105 4 0.971079 106 6 0.7183036 41 4 0.929032 151 7 0.964286 41 4 0.800546 120 6 0.729058 43 4 0.952381 47 6 1.0000000 25 3 1.0000000 6 0 0.823024 199 7 1.0000000 8 0 1.0000000 12 0 0.805556 32 0 0.8571429 22 0 1.0000000 7 0 NA 0 0 0.9910714 71 4 1.0000000 53 3 0.777750 89 3 0.964286 22 0 0.9583333 23 3 0.8814815 55 3 0.8571429 27 3 0.925638 156 6 0.9853175 168 8 1.000000 35 4 1.000000 9 0 0.7882353 53 3 0.9866071 94 7 0.9539683 117 7 0.9627033 171 7 0.8220109 83 3 0.9444444 60 3 1.0000000 196 9 0.996633 114 6 0.961735 46 6 0.8856261 133 9 0.9844907 88 5 0.8965517 127 7 0.9463684 134 6 1.0000000 12 0 0.8842689 199 8 0.9705882 0.9325176 0.9166667 0.9855072 0.9166667 0.980392 0.8333333 1.0000000 1.0000000 1.0000000 0.9622739 1.0000000 1.0000000 1.0000000 1.0000000 1.0000000 NA 0.9791667 1.0000000 0.9629167 1.0000000 NA 0.9777778 1.0000000 0.9421850 0.9559524 1.00000000 1.000000 0.9803922 0.9642857 0.9761905 0.9547764 0.9420290 1.0000000 1.00000000 0.98989899 0.958333 0.8187831 0.9586420 0.9885057 0.9779942 1.0000000 0.9824561 0 0.9418803 0.959140 -1.2895e-02 3 0.831356 0.915739 -0.08438396 9.6703e-01 1.1375e-01 lowCoverage 1.000000 1.000000 lowCoverage 0.95430813 0.18106173 lowCoverage 1.00000 1.00000 lowCoverage -0.03200632 0.2924298 lowCoverage 1.00000 lowCoverage 0.9418803 0.9493671 -0.00038052 3 0.831356 0.8660406 -0.0346850 9.4953e-01 6.4907e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.2322e-01 4.7053e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0284384 4.5164e-01 lowCoverage 1.0000e+00 lowCoverage 0.9475945 0.9731664 -0.02881887 3 0.931356 0.8827937 0.04856186 9.9967e-01 6.4366e-02 lowCoverage 1.0000e+00 8.5520e-01 lowCoverage 9.0863e-01 4.5030e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -3.5700e-02 2.9403e-01 lowCoverage 1.0000000 lowCoverage 0.959140 0.9493671 0.01447270 6 0.9157395 0.8660406 0.04969893 5.5712e-01 4.4561e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.6062e-01 7.7786e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0035679 9.1852e-01 lowCoverage 1.0000e+00 lowCoverage 0.960129 0.9766607 -0.01758532 6 0.9619328 0.9808818 -0.01894909 9.9649e-01 1.7802e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.8417e-01 6.9305e-01 insignificant 1.0000e+00 1.00000000 insignificant -3.6932e-03 9.0361e-01 lowCoverage 1.0000000 lowCoverage 0.9508716 0.9766607 -3.1270e-02 7 0.9622673 0.9808818 -0.0186146 9.9361e-01 5.2172e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9279e-01 8.0154e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00726110 8.4667e-01 insignificant 1.0000e+00 insignificant chr9 138016126 138017126 34905 UBAC1 ENSG00000130560 0.8616313 410 9 0.782859 153 8 0.6430001 170 8 0.698029 431 9 0.753274 51 6 0.768345 295 9 0.790669 88 8 0.738301 148 8 0.7443302 137 8 0.8730373 117 8 0.863332 292 8 0.5145833 69 8 0.8205952 191 8 NA 0 0 0.9398019 112 8 0.8138889 49 7 0.5850694 61 6 0.6936973 490 8 0.8542326 125 9 0.776891 253 8 0.818123 105 7 0.6414083 138 8 0.8408813 266 8 0.7287461 76 8 0.922974 102 8 0.8044148 226 9 0.758412 118 8 0.706250 39 4 0.8038560 136 8 0.7507950 295 9 0.8426112 259 9 0.8194941 454 9 0.4520525 180 8 0.4422444 153 8 0.3142857 49 4 0.495995 118 9 0.498115 67 6 0.3606705 300 9 0.7236232 278 9 0.4961670 382 9 0.5683665 340 9 0.4986731 322 8 0.6464374 404 9 0.8415303 0.7843563 0.6327405 0.7842583 0.7541343 0.767212 0.7994087 0.7298641 0.7351780 0.8581564 0.8667549 0.5018828 0.8101392 NA 0.9404801 0.8154347 0.5939098 0.6914035 0.8634902 0.7404709 0.8186229 0.6313479 0.8231932 0.7230634 0.9262690 0.8321219 0.73900022 0.719874 0.7977991 0.7663314 0.8654309 0.9116307 0.4556737 0.4423089 0.34546288 0.54854204 0.496351 0.4320425 0.7346156 0.4995515 0.5452127 0.4743463 0.6419134 6 0.7866960 0.829191 -4.7766e-02 8 0.779046 0.813548 -0.03450204 9.7062e-01 1.8537e-02 weaklyHypometh 1.000000 0.579267 insignificant 0.81777740 0.22474879 insignificant 1.00000 1.00000 insignificant -0.02251986 0.4889627 insignificant 1.00000 insignificant 0.7862637 0.4330254 0.34052322 8 0.701141 0.3935368 0.3076042 1.2916e-31 9.9227e-01 hypermethylated 4.4537e-30 1.0000e+00 hypermethylated 1.8227e-12 1.0000e+00 hypermethylated 6.5097e-11 1.0000e+00 hypermethylated 0.3367501 1.7266e-06 hypermethylated 6.1663e-05 hypermethylated 0.7866960 0.6286211 0.16386678 8 0.779046 0.5822137 0.19683189 1.4411e-11 9.6494e-01 weaklyHypermeth 2.4019e-09 1.0000e+00 weaklyHypermeth 3.1677e-07 9.7404e-01 weaklyHypermeth 4.5252e-05 1.0000e+00 weaklyHypermeth 1.7732e-01 1.0372e-02 weaklyHypermeth 0.2469424 insignificant 0.828817 0.4330254 0.39141777 8 0.7321928 0.3935368 0.33865600 1.1774e-25 1.0000e+00 hypermethylated 3.4629e-24 1.0000e+00 hypermethylated 3.0210e-12 9.9999e-01 hypermethylated 1.6783e-10 1.0000e+00 hypermethylated 0.3592700 2.1120e-06 hypermethylated 8.7999e-05 hypermethylated 0.829191 0.6286211 0.21757990 8 0.8135476 0.5822137 0.23133393 1.5122e-11 9.8481e-01 hypermethylated 1.8903e-09 1.0000e+00 hypermethylated 2.3876e-06 9.7334e-01 hypermethylated 3.4108e-04 1.00000000 hypermethylated 1.9984e-01 6.4336e-03 weaklyHypermeth 0.2474446 insignificant 0.4335260 0.6286211 -1.6451e-01 8 0.4372632 0.5822137 -0.1449505 4.3470e-01 2.0158e-08 weaklyHypometh 1.0000e+00 3.7331e-07 weaklyHypometh 6.0646e-01 8.9321e-05 weaklyHypometh 1.0000e+00 1.7399e-03 weaklyHypometh -0.15942627 1.9153e-02 weaklyHypometh 2.1153e-01 insignificant chr9 138023526 138024526 34906 UBAC1 ENSG00000130560 0.5328875 493 13 0.363153 492 13 0.4610138 514 13 0.481396 349 13 0.494437 340 11 0.554593 509 13 0.535494 609 13 0.456410 495 13 0.4174066 561 11 0.4551440 487 11 0.558436 609 13 0.5332473 413 10 0.3925363 560 11 0.663507 184 8 0.4404177 594 11 0.5645827 336 11 0.2127186 580 9 0.3683420 609 13 0.3633648 641 12 0.419413 526 13 0.626940 268 14 0.2956220 169 10 0.6170935 327 12 0.5359234 300 13 0.484104 373 9 0.3822908 709 13 0.418235 400 13 0.293321 293 11 0.4793831 611 11 0.4426144 764 13 0.3936231 853 13 0.5264908 625 13 0.2983354 570 13 0.2010493 497 13 0.3310680 536 8 0.343294 159 10 0.225076 428 13 0.3598353 745 13 0.3286519 389 13 0.3907375 400 12 0.3348841 320 12 0.3382553 307 11 0.4606073 250 12 0.4586248 0.3455075 0.4422738 0.4357313 0.4289841 0.583851 0.4872111 0.4095953 0.3249282 0.5174131 0.5258587 0.5174668 0.3224893 0.5090812 0.3755503 0.4253587 0.3047561 0.3831234 0.3240708 0.3750942 0.6018318 0.2478978 0.4964602 0.4722805 0.4396795 0.3412490 0.38468798 0.366577 0.4251791 0.3184913 0.3420700 0.5362671 0.1722954 0.1767055 0.22134560 0.21889479 0.189283 0.2286938 0.2778792 0.3507887 0.3014988 0.2737343 0.3934676 9 0.3925432 0.390999 1.2572e-02 13 0.542715 0.468676 0.07403872 3.8483e-01 6.4422e-01 insignificant 1.000000 1.000000 insignificant 0.52494366 0.96963779 insignificant 1.00000 1.00000 insignificant 0.00545502 0.8885630 insignificant 1.00000 insignificant 0.3922144 0.2081772 0.18846680 13 0.437439 0.3003170 0.1371217 1.0671e-25 9.9925e-01 weaklyHypermeth 2.8842e-24 1.0000e+00 weaklyHypermeth 5.5101e-16 1.0000e+00 weaklyHypermeth 3.6734e-14 1.0000e+00 weaklyHypermeth 0.1703155 3.1701e-04 weaklyHypermeth 5.7637e-03 weaklyHypermeth 0.3921410 0.4135654 0.08311024 13 0.437434 0.3553386 0.08209569 3.0110e-10 9.9853e-01 weaklyHypermeth 4.3014e-08 1.0000e+00 weaklyHypermeth 1.0641e-07 9.9991e-01 weaklyHypermeth 1.7735e-05 1.0000e+00 weaklyHypermeth 9.2798e-02 1.7772e-02 weaklyHypermeth 0.3781250 insignificant 0.390776 0.2081772 0.18647614 13 0.4492118 0.3003170 0.14889486 1.7383e-16 9.9953e-01 weaklyHypermeth 3.5475e-15 1.0000e+00 weaklyHypermeth 2.7281e-11 9.9965e-01 weaklyHypermeth 1.2401e-09 1.0000e+00 weaklyHypermeth 0.1648605 1.1651e-03 weaklyHypermeth 1.7653e-02 weaklyHypermeth 0.390653 0.4135654 0.07505025 13 0.4488308 0.3553386 0.09349227 2.2165e-05 9.9128e-01 weaklyHypermeth 1.1666e-03 1.0000e+00 weaklyHypermeth 4.9240e-04 9.9524e-01 weaklyHypermeth 2.1409e-02 1.00000000 weaklyHypermeth 8.7343e-02 4.7850e-02 weaklyHypermeth 0.9028274 insignificant 0.2074377 0.4135654 -9.9216e-02 13 0.2681967 0.3553386 -0.0871418 9.9953e-01 4.3483e-08 weaklyHypometh 1.0000e+00 7.4971e-07 weaklyHypometh 9.9725e-01 8.4538e-05 weaklyHypometh 1.0000e+00 1.6908e-03 weaklyHypometh -0.07751767 6.3954e-02 insignificant 4.7374e-01 insignificant chr9 138024626 138025626 34907 UBAC1 ENSG00000130560 0.4706389 390 16 0.386294 504 12 0.4306599 514 15 0.468447 392 16 0.467169 401 14 0.612256 665 18 0.483026 465 18 0.321059 466 10 0.3677171 548 12 0.5711190 421 10 0.613889 705 17 0.3260622 297 11 0.4769731 464 12 0.400421 352 11 0.4216690 538 11 0.3259137 255 14 0.4147111 105 3 0.4838164 508 16 0.4753699 711 16 0.525116 518 17 0.572981 211 17 0.4163474 213 9 0.5415056 378 17 0.3244431 210 12 0.486320 108 8 0.4708764 697 13 0.361854 433 11 0.403733 184 11 0.5871421 490 10 0.4457601 723 18 0.3875829 803 12 0.6195103 551 16 0.3764077 354 11 0.6383271 397 16 0.4966352 440 11 0.658333 35 2 0.550618 417 13 0.5104596 529 12 0.4121416 389 13 0.5784867 358 12 0.4728593 311 15 0.3827283 434 16 0.5181987 368 17 0.4378060 0.2977824 0.3998088 0.4037389 0.4017996 0.559710 0.4023648 0.3823374 0.2969347 0.5176707 0.5077197 0.3922520 0.2499788 0.5032284 0.3264757 0.3348259 0.1883415 0.3616289 0.2824279 0.3467338 0.5513442 0.1969197 0.4824213 0.4228361 0.2750208 0.3721393 0.34914558 0.305193 0.4541789 0.3104697 0.2872284 0.6259569 0.2674543 0.4670706 0.49964846 0.34851115 0.512618 0.4471061 0.2737084 0.4090179 0.3111985 0.2323845 0.3656090 8 0.3988935 0.383323 -2.9118e-03 12 0.454335 0.435494 0.01884075 8.9846e-01 7.4940e-01 insignificant 1.000000 1.000000 insignificant 0.95213344 0.67572715 insignificant 1.00000 1.00000 insignificant -0.01605494 0.6371133 insignificant 1.00000 insignificant 0.3988935 0.4221915 -0.06879757 12 0.454335 0.4536399 0.0006948 9.3379e-01 1.2140e-04 weaklyHypometh 1.0000e+00 1.3488e-02 weaklyHypometh 9.1810e-01 2.5064e-03 weaklyHypometh 1.0000e+00 3.1330e-01 insignificant -0.0863471 1.0339e-01 insignificant 7.1303e-01 insignificant 0.3987630 0.3623656 0.04308180 13 0.429532 0.4129972 0.01653458 4.2729e-02 4.1831e-01 weaklyHypermeth 5.9855e-01 1.0000e+00 insignificant 2.5850e-01 1.0186e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -2.0767e-02 6.2298e-01 insignificant 1.0000000 insignificant 0.383323 0.4221915 -0.06503786 12 0.4354940 0.4536399 -0.01814596 9.5941e-01 1.9790e-03 weaklyHypometh 1.0000e+00 1.9217e-01 insignificant 9.7389e-01 5.4474e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0702922 1.9447e-01 insignificant 1.0000e+00 insignificant 0.383230 0.3623656 0.04955266 12 0.4325619 0.4129972 0.01956470 2.0009e-01 7.2501e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.5373e-01 4.8905e-01 insignificant 1.0000e+00 1.00000000 insignificant -4.7117e-03 9.1849e-01 insignificant 1.0000000 insignificant 0.4223860 0.3623656 1.3459e-01 12 0.4742599 0.4129972 0.0612627 1.1474e-02 9.7694e-01 weaklyHypermeth 8.1564e-01 1.0000e+00 insignificant 2.1035e-01 9.9564e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.06558052 2.6389e-01 insignificant 1.0000e+00 insignificant chr9 138044026 138045026 34908 UBAC1 ENSG00000130560 0.8888260 312 17 0.864152 300 20 0.7486701 329 22 0.982923 233 9 0.809671 156 11 0.891381 322 14 0.854626 215 14 0.879796 219 18 0.7885365 177 12 0.8793196 308 21 0.934881 543 23 0.8536041 166 14 0.7863805 332 22 0.416981 65 2 0.9031586 274 21 0.7594203 102 7 0.8406746 88 11 0.9236766 274 15 0.8595546 407 22 0.887762 307 14 0.791150 278 22 0.7185578 103 8 0.8977556 375 20 0.8007344 177 13 0.853439 124 6 0.9281472 249 14 0.822970 262 19 0.755159 91 6 0.7152913 245 15 0.8572262 346 17 0.8367254 481 22 0.9241222 530 21 0.6281935 262 20 0.7909418 402 22 0.7231223 430 18 0.775463 154 11 0.694536 205 15 0.7775754 302 16 0.8598362 231 16 0.8395141 357 14 0.9062824 200 14 0.8351673 297 15 0.7626776 322 12 0.8662963 0.9105605 0.8650396 0.9636900 0.8793783 0.889723 0.8829144 0.8691955 0.8557723 0.9324991 0.9387777 0.9021866 0.8930981 NA 0.9125273 0.8330431 0.8219405 0.9037360 0.9084931 0.9177696 0.8828701 0.8264235 0.9517642 0.9571121 0.8778979 0.9113636 0.89357633 0.954180 0.8501810 0.9124823 0.8992585 0.9431326 0.8235554 0.8129425 0.90959203 0.92311662 0.846526 0.8632481 0.9114026 0.9210748 0.8720269 0.8867526 0.8833613 2 0.8876755 0.897515 -1.0817e-02 20 0.812238 0.762527 0.04971087 8.1655e-01 6.0061e-01 insignificant 1.000000 1.000000 insignificant 0.84553601 0.57543670 insignificant 1.00000 1.00000 insignificant 0.01259318 0.7070261 insignificant 1.00000 insignificant 0.8874340 0.7986309 0.06835977 21 0.806181 0.7056484 0.1005328 8.5619e-07 8.2554e-01 weaklyHypermeth 8.3940e-06 1.0000e+00 weaklyHypermeth 1.3574e-02 8.4871e-01 weaklyHypermeth 1.0773e-01 1.0000e+00 insignificant 0.1060611 1.0078e-02 weaklyHypermeth 9.7846e-02 weaklyHypermeth 0.8877972 0.8953737 0.00983852 15 0.855447 0.7575040 0.09794283 2.4059e-03 9.1679e-01 weaklyHypermeth 4.9099e-02 1.0000e+00 weaklyHypermeth 1.4328e-01 8.8584e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -2.9958e-03 9.3231e-01 insignificant 1.0000000 insignificant 0.897940 0.7981756 0.07245225 20 0.7494904 0.7056484 0.04384197 2.4737e-04 9.9458e-01 weaklyHypermeth 1.9633e-03 1.0000e+00 weaklyHypermeth 5.3256e-02 9.9302e-01 insignificant 3.6229e-01 1.0000e+00 insignificant 0.0934679 1.5800e-02 weaklyHypermeth 1.4629e-01 insignificant 0.900217 0.8953737 0.02577790 15 0.8503539 0.7575040 0.09284996 2.3109e-02 9.9974e-01 weaklyHypermeth 3.2548e-01 1.0000e+00 insignificant 2.2571e-01 9.9894e-01 insignificant 1.0000e+00 1.00000000 insignificant -1.5589e-02 6.2810e-01 insignificant 1.0000000 insignificant 0.7986231 0.8953737 -4.6289e-02 16 0.7259654 0.7575040 -0.0315385 3.7882e-01 1.7887e-01 insignificant 1.0000e+00 9.0795e-01 insignificant 2.7034e-01 5.3072e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.10905695 1.1673e-02 weaklyHypometh 1.5707e-01 insignificant chr9 138133226 138134226 34910 NACC2 ENSG00000148411 0.8493930 355 13 0.793295 278 12 0.7769479 255 14 0.884463 289 14 0.798273 116 12 0.872886 395 14 0.734678 162 8 0.883357 274 13 0.7638956 272 13 0.9136837 242 13 0.831406 457 14 0.7596325 136 12 0.8258388 408 13 0.877959 158 9 0.7881468 199 13 0.4337302 55 4 0.7325244 78 7 0.8201644 336 13 0.8431715 313 11 0.839701 298 13 0.803682 138 12 0.8166217 235 13 0.8442527 237 13 0.6951154 134 9 0.716333 213 9 0.8261077 313 14 0.884492 257 12 0.933329 130 10 0.7538586 251 11 0.7911917 376 14 0.7832702 485 14 0.8388684 436 13 0.9054583 247 14 0.8116621 261 11 0.5612245 141 4 0.805379 136 7 0.704892 259 12 0.8481739 328 14 0.8464368 241 11 0.7937625 416 13 0.7984926 253 11 0.8512618 269 13 0.7901852 293 13 0.8396126 0.7820741 0.7657822 0.8870036 0.7892309 0.868465 0.7309072 0.8556734 0.8010497 0.8990202 0.8281183 0.7634729 0.7899798 0.9479678 0.8326447 0.5694799 0.7450246 0.8627480 0.7999554 0.8020933 0.8076175 0.7847344 0.8212542 0.6987050 0.7875962 0.8295314 0.86968246 0.937928 0.7649807 0.8297775 0.8117067 0.8473341 0.8707181 0.7541736 0.79986799 0.84744997 0.806197 0.8111762 0.7990660 0.8323826 0.7505809 0.8084606 0.7982347 5 0.8322822 0.832761 -1.6624e-03 13 0.772645 0.806507 -0.03386214 2.0566e-01 8.5099e-01 insignificant 1.000000 1.000000 insignificant 0.62209577 0.51000282 insignificant 1.00000 1.00000 insignificant -0.00610283 0.8384620 insignificant 1.00000 insignificant 0.8322822 0.8134111 0.01221512 13 0.772645 0.7364778 0.0361672 1.4488e-02 2.6665e-01 weaklyHypermeth 8.6238e-02 1.0000e+00 weaklyHypermeth 3.5666e-01 4.9418e-02 inconclusive 1.0000e+00 1.0000e+00 insignificant 0.0283591 6.2112e-01 insignificant 1.0000e+00 insignificant 0.8322822 0.8457880 0.00664868 13 0.772645 0.7848388 -0.01219391 7.7994e-02 1.3254e-01 insignificant 9.2850e-01 1.0000e+00 insignificant 2.8111e-01 1.2109e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -1.4870e-02 5.7699e-01 insignificant 1.0000000 insignificant 0.832761 0.8134111 0.01378076 13 0.8065071 0.7364778 0.07002931 2.9578e-02 2.2649e-01 weaklyHypermeth 1.8035e-01 1.0000e+00 insignificant 2.9411e-01 5.7250e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0344619 5.4266e-01 insignificant 1.0000e+00 insignificant 0.832761 0.8457880 0.00286928 13 0.8065071 0.7848388 0.02166823 3.7580e-01 1.0048e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.8276e-01 1.3124e-01 insignificant 1.0000e+00 1.00000000 insignificant -8.7676e-03 7.1499e-01 insignificant 1.0000000 insignificant 0.8134111 0.8457880 -1.1782e-03 13 0.7364778 0.7848388 -0.0483611 5.7806e-01 5.5011e-02 insignificant 1.0000e+00 3.5039e-01 insignificant 5.8497e-01 7.4571e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04322951 4.3796e-01 insignificant 1.0000e+00 insignificant chr9 138140926 138141926 34911 NACC2 ENSG00000148411 0.1500127 387 17 0.047154 485 18 0.0926594 868 18 0.115494 390 15 0.062541 710 15 0.262630 710 17 0.111858 551 14 0.227976 603 14 0.1001028 772 15 0.1163932 1144 14 0.077783 481 13 0.1592100 536 14 0.1446964 565 17 0.099784 561 16 0.0442365 1126 14 0.0791584 646 14 0.0000000 56 4 0.0641984 528 11 0.0435235 821 14 0.253696 551 17 0.127963 391 15 0.0860775 423 14 0.0896092 342 14 0.0867992 495 15 0.175461 318 14 0.0531596 804 18 0.060375 957 15 0.084536 513 14 0.1649760 554 14 0.1522939 910 18 0.0606333 1109 18 0.2392905 606 19 0.0815187 352 16 0.1694027 356 14 0.2060279 425 17 0.021259 185 13 0.089485 429 17 0.1950757 720 18 0.1481181 552 17 0.1123536 381 16 0.1003069 333 11 0.1230614 403 13 0.0913347 429 16 0.0891361 0.0256766 0.0689671 0.0142131 0.0272143 0.112053 0.0567685 0.0536629 0.0387256 0.0333382 0.0590798 0.0653332 0.0517079 0.0357360 0.0285146 0.0376617 0.0012562 0.0432386 0.0235098 0.0505446 0.1399870 0.0408434 0.0613761 0.0562619 0.0686820 0.0414700 0.05012551 0.044876 0.0561688 0.0528037 0.0222516 0.1242382 0.0649881 0.0250372 0.20164295 0.02970892 0.080866 0.1167056 0.0519732 0.0723433 0.0461135 0.1051057 0.0337537 12 0.0540194 0.069965 -1.0806e-02 14 0.166032 0.149557 0.01647472 8.9110e-01 9.5917e-01 insignificant 1.000000 1.000000 insignificant 0.95920711 0.95316170 insignificant 1.00000 1.00000 insignificant -0.00244243 0.9157177 insignificant 1.00000 insignificant 0.0537738 0.1135442 -0.05672186 14 0.164445 0.1795364 -0.0150912 8.7881e-01 1.4940e-02 weaklyHypometh 1.0000e+00 7.1141e-01 insignificant 6.9261e-01 9.3732e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0144726 6.8219e-01 insignificant 1.0000e+00 insignificant 0.0537954 0.0610687 -0.01237877 13 0.181226 0.1122289 0.06899704 9.8756e-01 2.8650e-02 weaklyHypometh 1.0000e+00 5.4056e-01 insignificant 9.9728e-01 3.5790e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -2.3796e-03 8.9946e-01 insignificant 1.0000000 insignificant 0.069510 0.1139035 -0.04602058 14 0.0879882 0.2051759 -0.11718767 9.8725e-01 7.3877e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.0804e-01 9.1706e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0120302 7.3561e-01 insignificant 1.0000e+00 insignificant 0.069288 0.0604607 -0.00204153 13 0.1009320 0.1057166 -0.00478465 9.9166e-01 1.6195e-02 weaklyHypometh 1.0000e+00 5.9982e-01 insignificant 9.9219e-01 2.0751e-01 insignificant 1.0000e+00 1.00000000 insignificant 6.2867e-05 9.9744e-01 insignificant 1.0000000 insignificant 0.1101485 0.0610352 4.4211e-02 14 0.1295331 0.1214191 0.0081140 8.4734e-01 3.0726e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9633e-01 4.0844e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01209308 7.1637e-01 insignificant 1.0000e+00 insignificant chr9 138141026 138142026 34912 NACC2 ENSG00000148411 0.1760433 497 22 0.059022 503 19 0.0924809 884 19 0.138182 516 20 0.058238 682 16 0.260314 775 18 0.103429 559 15 0.238951 613 15 0.1151136 769 16 0.1303096 1129 15 0.081791 490 14 0.1826845 539 15 0.1783843 566 18 0.098383 521 15 0.0507924 1121 15 0.0960175 646 15 0.0197193 84 6 0.0962547 628 12 0.0403251 845 19 0.226293 596 18 0.133904 375 15 0.0661439 428 15 0.0815282 371 15 0.0938525 495 16 0.177873 346 15 0.1054273 837 19 0.067930 935 16 0.071423 500 15 0.1617219 540 15 0.1294219 931 23 0.0572704 1150 19 0.2433312 656 20 0.0836293 353 17 0.0484712 374 15 0.1952533 533 22 0.046588 378 17 0.082137 421 19 0.1836250 749 23 0.1527943 679 22 0.1212827 462 17 0.1543090 389 16 0.1224587 505 18 0.1399928 540 21 0.0880152 0.0373820 0.0689703 0.0196376 0.0258278 0.103322 0.0498937 0.0687478 0.0471131 0.0470775 0.0546601 0.0839063 0.0480985 0.0440924 0.0333490 0.0528025 0.0110506 0.0470304 0.0228987 0.0550716 0.1292364 0.0225860 0.0620909 0.0581075 0.0660175 0.0548974 0.05953012 0.055245 0.0643164 0.0443466 0.0289518 0.1294875 0.0675424 0.0117381 0.18372151 0.02355596 0.067482 0.1134580 0.0611029 0.0728488 0.0490418 0.0824578 0.0450966 13 0.0593096 0.072722 -1.0065e-02 15 0.146269 0.151799 -0.00552978 8.0722e-01 9.5826e-01 insignificant 1.000000 1.000000 insignificant 0.83769639 0.98930679 insignificant 1.00000 1.00000 insignificant 0.00631748 0.7788913 insignificant 1.00000 insignificant 0.0590877 0.1082621 -0.03696313 15 0.139962 0.1469081 -0.0069465 3.1821e-01 2.0148e-02 weaklyHypometh 1.0000e+00 8.5392e-01 insignificant 1.7249e-01 9.3491e-01 insignificant 9.9704e-01 1.0000e+00 insignificant 0.0155190 6.2984e-01 insignificant 1.0000e+00 insignificant 0.0591835 0.0874466 -0.01237971 14 0.177562 0.1294216 0.04814078 9.9491e-01 1.4940e-02 weaklyHypometh 1.0000e+00 3.2557e-01 insignificant 9.9910e-01 3.3592e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -1.6031e-02 3.5152e-01 insignificant 1.0000000 insignificant 0.072176 0.1082621 -0.02720823 15 0.0925259 0.1469081 -0.05438213 6.7852e-01 8.4109e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 6.5500e-01 8.9047e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0092015 7.7705e-01 insignificant 1.0000e+00 insignificant 0.072055 0.0870754 -0.00172252 14 0.1078763 0.1264818 -0.01860554 9.9815e-01 6.3504e-03 weaklyHypometh 1.0000e+00 3.0570e-01 insignificant 9.9819e-01 4.4389e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant -2.2349e-02 2.2689e-01 insignificant 1.0000000 insignificant 0.1055295 0.0879208 2.0738e-02 19 0.1277868 0.1418246 -0.0140378 9.2534e-01 1.3419e-03 inconclusive 1.0000e+00 1.2425e-02 inconclusive 9.9833e-01 3.3797e-02 inconclusive 1.0000e+00 2.6823e-01 insignificant -0.03155010 3.0416e-01 insignificant 1.0000e+00 insignificant chr9 138269226 138270226 34916 LHX3 ENSG00000107187 0.7658730 141 7 0.667749 132 9 0.7700504 101 9 0.739282 123 2 0.631832 90 4 0.763661 99 5 0.667414 111 6 0.817279 146 9 0.7868389 95 9 0.6732540 153 9 0.776026 234 9 0.7863872 82 4 0.8010877 220 9 0.683578 84 5 0.8449675 111 8 0.6138228 113 9 0.7053571 64 4 0.6113120 325 4 0.7956454 130 9 0.825000 78 2 0.825926 57 5 0.9684140 64 2 0.7820346 89 6 0.8253968 41 6 0.743214 92 2 0.8181391 156 9 0.891498 96 6 0.765608 39 5 0.7947413 161 9 0.7181672 124 7 0.8452381 70 8 0.7803030 53 2 0.7572893 94 6 0.7614815 121 5 0.8646414 187 9 0.758333 25 1 0.566234 96 9 0.7942857 84 8 0.7129630 60 4 0.8750000 131 2 0.7133017 168 2 0.6726066 145 7 0.7056277 87 5 0.9665179 0.9143519 0.8745902 0.8403708 0.6155627 0.933092 0.5233022 0.9426081 0.8567091 0.9477844 0.9302043 0.9572243 0.9504858 0.9328239 0.9421503 0.6214658 0.8401162 0.9434304 0.9103877 0.9687500 0.9708333 0.9431880 0.8279762 0.9970238 0.8871394 0.9541246 0.97706229 0.769841 0.9222762 0.8273237 0.9821429 0.8715278 0.8314076 0.9329167 0.98222832 0.93750000 0.880283 0.8827381 0.9322917 0.9159226 0.8875952 0.8748409 0.9005156 0 0.8111702 0.845192 -4.3813e-02 9 0.722466 0.789989 -0.06752297 9.9957e-01 4.8410e-03 weaklyHypometh 1.000000 0.345784 insignificant 0.99886727 0.01356982 weaklyHypometh 1.00000 0.99350 insignificant -0.07690255 0.0057849 weaklyHypometh 0.79025 insignificant 0.8111702 0.8327815 -0.02610621 9 0.722466 0.7350780 -0.0126120 8.7730e-01 1.3455e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.7980e-01 1.8905e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0140566 7.5726e-01 insignificant 1.0000e+00 insignificant 0.8111702 0.9052453 -0.02385729 2 0.722466 0.7208531 0.00161279 2.1694e-01 4.8967e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 5.2698e-01 4.8327e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 4.2107e-04 9.9178e-01 lowCoverage 1.0000000 lowCoverage 0.845489 0.8286656 0.01589664 9 0.8074898 0.6738215 0.13366835 4.3674e-01 8.6023e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.8266e-02 7.7640e-01 insignificant 4.5209e-01 1.0000e+00 insignificant 0.0628459 2.0222e-01 insignificant 1.0000e+00 insignificant 0.845192 0.9052453 0.02579668 2 0.7899889 0.7208531 0.06913576 6.1448e-02 9.4070e-01 lowCoverage 7.2949e-01 1.0000e+00 lowCoverage 2.2236e-01 9.6716e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 7.7324e-02 1.0119e-01 lowCoverage 1.0000000 lowCoverage 0.8327815 0.9052453 1.8316e-02 2 0.7350780 0.7208531 0.0142248 3.7220e-01 7.3839e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.0871e-01 8.1732e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.01447772 7.9422e-01 lowCoverage 1.0000e+00 lowCoverage chr9 138368534 138369534 34917 GPSM1 ENSG00000160360 0.8799145 547 28 0.850444 591 30 0.7506138 971 31 0.916782 448 21 0.858261 789 26 0.888326 770 27 0.856726 1022 31 0.870677 566 28 0.8872611 793 30 0.9112987 747 30 0.862866 1058 30 0.8773461 788 29 0.8436017 746 30 0.890767 288 11 0.8793970 862 31 0.8429576 570 31 0.9486090 439 25 0.7939632 635 22 0.8998089 724 31 0.845942 718 25 0.871620 433 29 0.7399712 281 14 0.8810007 572 30 0.9283397 414 26 0.931516 174 12 0.8537382 645 31 0.815597 439 26 0.892032 497 25 0.8369086 549 23 0.8011700 746 29 0.9149579 823 31 0.9309325 893 30 0.2938546 793 28 0.2746774 813 31 0.2762671 630 23 0.385380 118 5 0.280964 537 26 0.4258568 648 30 0.8734260 639 25 0.7994712 627 28 0.8313895 373 17 0.8868894 557 22 0.8163764 371 21 0.8716179 0.8122217 0.7650388 0.9221743 0.8848582 0.882407 0.8708666 0.8817073 0.8884463 0.9306412 0.8841401 0.9072278 0.8681801 0.8687440 0.8744735 0.8125300 0.9137811 0.7943256 0.9015386 0.8934890 0.9154960 0.7355637 0.8529919 0.9239956 0.9047911 0.8669108 0.82360463 0.876495 0.8266711 0.8154415 0.9105281 0.9269182 0.2864559 0.2499606 0.29267849 0.34662629 0.288528 0.4126490 0.8490728 0.7746951 0.8371785 0.8834524 0.7787702 8 0.8678226 0.868698 -1.8925e-03 30 0.833041 0.854525 -0.02148336 9.1616e-01 2.3589e-01 insignificant 1.000000 1.000000 insignificant 0.91436520 0.32146952 insignificant 1.00000 1.00000 insignificant 0.00129609 0.9484065 insignificant 1.00000 insignificant 0.8678038 0.2901950 0.57197860 29 0.828131 0.2819085 0.5462221 1.3979e-237 1.0000e+00 hypermethylated 6.9895e-235 1.0000e+00 hypermethylated 1.5250e-51 1.0000e+00 hypermethylated 7.6248e-49 1.0000e+00 hypermethylated 0.5449448 7.7015e-07 hypermethylated 3.0806e-05 hypermethylated 0.8679084 0.8134009 0.05042241 26 0.848639 0.8283186 0.02032024 3.5811e-05 3.5386e-03 weaklyHypermeth 1.4921e-03 1.0408e-01 weaklyHypermeth 3.0978e-02 1.0241e-01 weaklyHypermeth 5.9572e-01 1.0000e+00 insignificant 2.6268e-02 2.1536e-01 insignificant 1.0000000 insignificant 0.868771 0.2901950 0.55233892 28 0.8575988 0.2819085 0.57569029 4.5382e-162 1.0000e+00 hypermethylated 2.2691e-159 1.0000e+00 hypermethylated 2.5183e-43 1.0000e+00 hypermethylated 1.2592e-40 1.0000e+00 hypermethylated 0.5436487 2.5982e-08 hypermethylated 1.8558e-06 hypermethylated 0.869000 0.8134009 0.05377193 26 0.8695321 0.8283186 0.04121350 8.0272e-03 3.7184e-02 weaklyHypermeth 1.3840e-01 9.2960e-01 insignificant 4.1422e-02 4.7760e-01 weaklyHypermeth 7.1418e-01 1.00000000 insignificant 2.4972e-02 3.1889e-01 insignificant 1.0000000 insignificant 0.2903591 0.8134009 -4.8380e-01 26 0.2995278 0.8283186 -0.5287908 1.0000e+00 9.3807e-84 hypomethylated 1.0000e+00 4.6903e-81 hypomethylated 1.0000e+00 6.7310e-25 hypomethylated 1.0000e+00 3.3655e-22 hypomethylated -0.51867719 1.6687e-07 hypomethylated 5.5624e-05 hypomethylated chr9 138369034 138370034 34918 GPSM1 ENSG00000160360 0.8692320 571 39 0.792481 689 44 0.7182865 1381 46 0.866654 519 37 0.854948 1428 44 0.854949 787 41 0.852982 1680 47 0.820365 688 41 0.8536275 1099 46 0.8929442 1164 47 0.836165 1314 45 0.8475315 1355 45 0.8809135 1095 46 0.917272 508 12 0.8830219 1269 47 0.8296661 870 45 0.9071550 737 41 0.8432464 701 38 0.8830771 1000 46 0.869528 672 36 0.823243 626 42 0.9007424 251 15 0.8548542 914 46 0.9044487 533 38 0.796585 239 18 0.8816186 742 45 0.795230 670 40 0.825919 731 40 0.8258284 574 37 0.7931204 761 41 0.9050656 902 44 0.8994522 869 43 0.2439916 1051 47 0.1895292 1081 46 0.2010197 865 42 0.326145 173 12 0.254855 598 37 0.3180857 771 45 0.8721500 695 40 0.8492940 664 42 0.8385401 445 31 0.8880657 640 37 0.8714658 418 34 0.8699009 0.7838681 0.7192375 0.8826241 0.8821731 0.880319 0.8594065 0.8541964 0.8732975 0.9173072 0.8702284 0.8752313 0.8763991 NA 0.8738742 0.8574195 0.9077536 0.8284281 0.8794692 0.8979909 0.9087919 0.8762111 0.8588974 0.9010852 0.8527751 0.8719743 0.83742560 0.862609 0.8270882 0.8083280 0.9029254 0.9043871 0.2111738 0.1736042 0.19062147 0.28220360 0.231516 0.3033968 0.8951148 0.8512593 0.8718130 0.8918631 0.8338837 11 0.8590013 0.870072 -9.0176e-03 44 0.804490 0.807541 -0.00305033 9.9094e-01 6.4193e-02 insignificant 1.000000 1.000000 insignificant 0.98795343 0.03148193 weaklyHypometh 1.00000 1.00000 insignificant 0.00319338 0.8472400 insignificant 1.00000 insignificant 0.8591773 0.2145847 0.64390331 46 0.836039 0.2274641 0.6085749 0.0000e+00 1.0000e+00 hypermethylated 0.0000e+00 1.0000e+00 hypermethylated 3.1937e-89 1.0000e+00 hypermethylated 3.1937e-86 1.0000e+00 hypermethylated 0.5980980 8.4090e-08 hypermethylated 4.9465e-06 hypermethylated 0.8592885 0.8633823 -0.00869413 43 0.835987 0.8375088 -0.00152179 9.9994e-01 5.1837e-09 weaklyHypometh 1.0000e+00 1.7279e-06 weaklyHypometh 9.9933e-01 8.2631e-06 weaklyHypometh 1.0000e+00 1.6526e-03 weaklyHypometh -1.0201e-02 4.4949e-01 insignificant 1.0000000 insignificant 0.870596 0.2145847 0.64628201 44 0.8313658 0.2274641 0.60390172 1.0700e-294 1.0000e+00 hypermethylated 1.0700e-291 1.0000e+00 hypermethylated 1.7723e-74 1.0000e+00 hypermethylated 1.7723e-71 1.0000e+00 hypermethylated 0.5949046 1.0746e-08 hypermethylated 9.7466e-07 hypermethylated 0.871071 0.8639384 -0.00364143 42 0.8393265 0.8610091 -0.02168265 9.9110e-01 1.3212e-04 weaklyHypometh 1.0000e+00 2.2020e-02 weaklyHypometh 9.5437e-01 1.9251e-02 weaklyHypometh 1.0000e+00 0.96253355 insignificant -1.3394e-02 4.1270e-01 insignificant 1.0000000 insignificant 0.2135922 0.8642407 -6.4191e-01 43 0.2163402 0.8785807 -0.6622406 1.0000e+00 1.3355e-171 hypomethylated 1.0000e+00 1.3355e-168 hypomethylated 1.0000e+00 2.8662e-47 hypomethylated 1.0000e+00 2.8662e-44 hypomethylated -0.60829886 1.5653e-07 hypomethylated 5.5624e-05 hypomethylated chr9 138553134 138554134 34919 ENSG00000218933 0.7166667 21 3 0.634855 77 5 0.4935827 80 5 0.660000 10 1 0.653663 53 3 0.645714 33 3 0.703209 54 5 0.503333 35 4 0.6679487 53 4 0.6602903 47 5 0.765832 109 5 0.6276190 48 5 0.5753302 67 5 NA 0 0 0.7522876 53 5 0.5769231 60 5 0.5995658 61 5 0.7083333 19 3 0.6084091 68 5 0.711429 38 4 0.585317 37 3 0.6800000 9 1 0.5818182 23 1 0.6907407 27 2 0.500000 2 0 0.6518193 60 5 0.616667 27 2 0.671905 36 4 0.7350000 30 4 0.6266667 57 5 0.6560440 80 5 0.7312903 56 3 0.5450000 66 5 0.6228070 60 5 0.5000000 22 2 0.270833 11 0 0.866748 77 5 0.5906349 46 5 0.5750000 24 3 0.9550000 32 3 0.8888889 8 0 0.8714286 26 3 0.6666667 12 0 0.8946237 0.7433165 0.6960006 0.7903226 0.8558726 0.735023 0.5851302 0.7930108 0.8374690 0.7374258 0.8725015 0.6706605 0.7999223 NA 0.7410921 0.7621175 0.7420782 0.8172043 0.6975806 0.8479263 0.7762047 0.5806452 0.7961877 0.6884679 0.8709959 0.7018000 0.79032258 0.735407 0.8064516 0.8150538 0.7610776 0.7412591 0.7854839 0.8764384 0.82125448 0.53763441 0.889179 0.7827701 0.8346774 0.9314516 0.9086022 0.8271889 0.6370968 0 0.6359026 0.677928 -7.6610e-03 2 0.637215 0.639858 -0.00264256 4.2672e-01 3.0433e-01 lowCoverage 1.000000 1.000000 lowCoverage 0.59951872 0.12801082 lowCoverage 1.00000 1.00000 lowCoverage 0.00158685 0.9515332 lowCoverage 1.00000 lowCoverage 0.6359026 0.6241135 0.00567105 5 0.637215 0.6211125 0.0161028 4.5646e-01 2.7663e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.9076e-01 3.5797e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0795219 3.6550e-01 lowCoverage 1.0000e+00 lowCoverage 0.6359026 0.8823529 -0.13582116 3 0.637215 0.8335023 -0.19628697 9.9996e-01 7.8330e-04 lowCoverage 1.0000e+00 4.1226e-02 lowCoverage 9.9670e-01 1.5510e-02 lowCoverage 1.0000e+00 4.7000e-01 lowCoverage -1.4587e-01 1.1446e-01 lowCoverage 1.0000000 lowCoverage 0.677928 0.6241135 0.00416480 2 0.6398579 0.6211125 0.01874540 4.3249e-01 2.6996e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 1.3048e-01 5.1565e-01 lowCoverage 7.9077e-01 1.0000e+00 lowCoverage 0.0779351 3.7626e-01 lowCoverage 1.0000e+00 lowCoverage 0.677928 0.8823529 -0.17069734 1 0.6398579 0.8335023 -0.19364442 9.9989e-01 3.6649e-03 lowCoverage 1.0000e+00 2.4433e-01 lowCoverage 9.8103e-01 4.6998e-02 lowCoverage 1.0000e+00 1.00000000 lowCoverage -1.4746e-01 1.1173e-01 lowCoverage 1.0000000 lowCoverage 0.6241135 0.8823529 -1.5478e-01 3 0.6211125 0.8335023 -0.2123898 9.7484e-01 5.9490e-02 lowCoverage 1.0000e+00 3.7025e-01 lowCoverage 9.9074e-01 1.5512e-01 lowCoverage 1.0000e+00 9.5945e-01 lowCoverage -0.22539289 6.4566e-02 lowCoverage 4.7475e-01 lowCoverage chr9 138566234 138567234 34920 NOTCH1 ENSG00000148400 0.6617342 123 6 0.535375 214 10 0.7250624 99 3 0.592793 168 6 0.621429 60 7 0.693962 182 7 0.457331 104 7 0.565810 188 10 0.6141414 129 10 0.8091298 108 6 0.667528 255 10 0.4562500 57 3 0.5262974 98 6 0.660055 71 3 0.8256953 82 3 0.2521212 38 3 0.9649123 81 2 0.6080703 114 6 0.8218193 141 6 0.676578 111 6 0.721805 76 6 0.7202745 87 7 0.6998196 123 10 0.7272884 75 7 0.657038 313 10 0.6449233 221 11 0.483222 108 3 0.600876 64 3 0.8264041 161 10 0.5140279 235 10 0.6237979 329 7 0.7788600 167 11 0.0803241 191 10 0.1753247 103 7 0.2916667 129 2 0.068182 260 10 0.069624 321 7 0.1475802 249 10 0.8456580 147 6 0.7195204 171 7 0.6482363 156 9 0.7968134 139 6 0.6411126 193 7 0.8395451 0.7194270 0.6535834 0.7770574 0.5948226 0.839683 0.6218651 0.6691194 0.8100112 0.8116534 0.7157460 0.6543624 0.5811049 0.7985967 0.7656369 0.4621939 0.8602412 0.7199043 0.7775484 0.7764282 0.8808607 0.7977650 0.6295622 0.8497639 0.7627848 0.6880807 0.51628733 0.634951 0.8478262 0.5464441 0.6122388 0.7834771 0.3112478 0.3930968 0.00503356 0.31208054 0.372768 0.4165000 0.8933824 0.7778271 0.7318040 0.8250998 0.8213604 3 0.6898551 0.655243 2.2144e-02 10 0.599272 0.592561 0.00671062 5.3791e-01 3.1272e-01 insignificant 1.000000 1.000000 insignificant 0.88767189 0.19012770 insignificant 1.00000 1.00000 insignificant -0.02972330 0.5193796 insignificant 1.00000 insignificant 0.6896980 0.1104000 0.48730649 7 0.591635 0.1888787 0.4027567 1.2198e-48 9.9992e-01 hypermethylated 8.1323e-47 1.0000e+00 hypermethylated 1.2724e-16 1.0000e+00 hypermethylated 9.0886e-15 1.0000e+00 hypermethylated 0.4980212 3.7193e-08 hypermethylated 2.4796e-06 hypermethylated 0.6902985 0.7084367 -0.03192092 10 0.623448 0.7137310 -0.09028307 8.8905e-01 1.0515e-04 weaklyHypometh 1.0000e+00 8.0883e-03 weaklyHypometh 9.8673e-01 3.1440e-04 weaklyHypometh 1.0000e+00 2.4880e-02 weaklyHypometh -9.3463e-02 1.0798e-01 insignificant 1.0000000 insignificant 0.654416 0.1094249 0.49270311 7 0.5073822 0.0970282 0.41035399 5.7019e-42 1.0000e+00 hypermethylated 4.0728e-40 1.0000e+00 hypermethylated 8.5510e-15 1.0000e+00 hypermethylated 6.5777e-13 1.0000e+00 hypermethylated 0.5277445 1.1075e-07 hypermethylated 6.5146e-06 hypermethylated 0.655578 0.7084367 -0.04396070 10 0.6464303 0.7137310 -0.06730071 8.5088e-01 2.2186e-03 weaklyHypometh 1.0000e+00 1.5847e-01 insignificant 9.1660e-01 3.6809e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant -6.3740e-02 2.3451e-01 insignificant 1.0000000 insignificant 0.1098637 0.7084367 -5.2750e-01 7 0.1323112 0.7137310 -0.5814198 1.0000e+00 2.2069e-43 hypomethylated 1.0000e+00 3.6782e-41 hypomethylated 1.0000e+00 1.9163e-13 hypomethylated 1.0000e+00 2.3954e-11 hypomethylated -0.59148463 2.5226e-06 hypomethylated 3.1533e-04 hypomethylated chr9 138582034 138583034 34921 NOTCH1 ENSG00000148400 0.6254339 451 13 0.460026 446 18 0.5725785 557 18 0.668248 516 16 0.522759 406 18 0.634790 650 18 0.540990 592 18 0.482777 483 18 0.4475359 547 18 0.6453249 481 17 0.543213 605 18 0.5196646 393 16 0.3012665 567 17 0.520057 243 14 0.5375104 470 17 0.6527209 348 15 0.4139379 274 12 0.4280426 734 16 0.3136288 647 18 0.541975 605 17 0.515443 309 17 0.5624667 166 11 0.5528428 372 18 0.4959968 192 15 0.597388 176 13 0.4689100 682 18 0.508028 401 15 0.297460 288 16 0.6077792 539 18 0.4254900 725 18 0.4690197 915 18 0.6513050 541 18 0.1096346 717 18 0.1841219 585 18 0.2007868 502 16 0.306061 57 3 0.306547 408 18 0.1656268 832 18 0.6912462 530 13 0.6273277 605 13 0.6664537 432 12 0.5897180 642 15 0.6808750 463 16 0.6383469 0.3882558 0.5340929 0.6206759 0.5140499 0.648401 0.5209722 0.4745577 0.4236657 0.6053374 0.5131771 0.4927528 0.2793998 0.5656280 0.4779524 0.7047207 0.3730394 0.3650658 0.3005788 0.5124298 0.5009644 0.5264861 0.5439520 0.5054258 0.5595383 0.4693407 0.50920899 0.322012 0.5562602 0.4104523 0.4273431 0.6379947 0.0786584 0.1441281 0.18617627 0.14487641 0.227625 0.1190890 0.6971431 0.5764843 0.6572887 0.5405863 0.6263399 9 0.5295175 0.515563 -1.1057e-02 18 0.482033 0.526438 -0.04440437 9.4947e-01 3.9417e-01 insignificant 1.000000 1.000000 insignificant 0.70061224 0.47300572 insignificant 1.00000 1.00000 insignificant 0.00594657 0.8691841 insignificant 1.00000 insignificant 0.5297762 0.1391669 0.37502621 18 0.520729 0.2190632 0.3016657 2.7951e-57 1.0000e+00 hypermethylated 2.3293e-55 1.0000e+00 hypermethylated 1.9576e-26 1.0000e+00 hypermethylated 3.2627e-24 1.0000e+00 hypermethylated 0.3064945 1.0781e-05 hypermethylated 2.9949e-04 hypermethylated 0.5299000 0.5311328 -0.11053540 15 0.513476 0.6666869 -0.15321139 1.0000e+00 6.2545e-12 weaklyHypometh 1.0000e+00 3.1272e-09 weaklyHypometh 1.0000e+00 4.1162e-10 weaklyHypometh 1.0000e+00 1.3721e-07 weaklyHypometh -1.3250e-01 3.5565e-04 weaklyHypometh 0.0237103 weaklyHypometh 0.515660 0.1391220 0.37932158 18 0.5025088 0.1963359 0.30617289 1.2951e-50 1.0000e+00 hypermethylated 1.1774e-48 1.0000e+00 hypermethylated 2.9579e-20 1.0000e+00 hypermethylated 4.2256e-18 1.0000e+00 hypermethylated 0.3005479 1.2864e-05 hypermethylated 3.8981e-04 hypermethylated 0.515277 0.5305129 -0.10383253 15 0.4371823 0.5942196 -0.15703730 1.0000e+00 3.0914e-09 weaklyHypometh 1.0000e+00 1.5457e-06 weaklyHypometh 1.0000e+00 1.5889e-07 weaklyHypometh 1.0000e+00 0.00015889 weaklyHypometh -1.3845e-01 8.1775e-04 weaklyHypometh 0.0743406 weaklyHypometh 0.1388889 0.5311094 -4.3391e-01 15 0.1818757 0.6508120 -0.4689363 1.0000e+00 2.5425e-41 hypomethylated 1.0000e+00 3.6321e-39 hypomethylated 1.0000e+00 4.4524e-17 hypomethylated 1.0000e+00 1.1795e-14 hypomethylated -0.43899454 2.9978e-06 hypomethylated 3.3309e-04 hypomethylated chr9 138591434 138592434 34922 NOTCH1 ENSG00000148400 0.7151340 375 11 0.725541 233 11 0.6376191 164 11 0.875780 341 11 0.732197 90 9 0.839322 498 11 0.770262 122 11 0.754742 245 11 0.7685018 188 11 0.8531297 138 9 0.813802 370 11 0.7567610 95 8 0.8172042 229 11 0.756667 54 5 0.8255221 180 11 0.7278187 87 10 0.8829365 59 4 0.8098063 359 11 0.5960892 194 11 0.781499 372 11 0.790000 103 9 0.8260582 132 10 0.8500800 216 11 0.8348384 100 7 0.783173 118 10 0.8160842 281 11 0.756914 150 10 0.739881 67 4 0.8448773 173 9 0.7876382 365 11 0.7264988 349 11 0.7802166 507 11 0.8205654 233 11 0.7814465 217 11 0.7928747 226 11 0.726340 60 5 0.770481 101 10 0.7824300 366 11 0.8471563 267 11 0.7772551 383 11 0.8180436 291 11 0.8206322 320 11 0.8739374 441 11 0.7957254 0.7101601 0.6461497 0.8629995 0.7334691 0.829348 0.7805290 0.7800856 0.7804590 0.8511321 0.7954701 0.8035481 0.8125091 0.7703011 0.8285542 0.7099352 0.8435120 0.8159264 0.7632600 0.8093678 0.8953757 0.7984815 0.8318287 0.8451851 0.8905625 0.8124511 0.83798408 0.842967 0.8222543 0.7390279 0.8013365 0.8473223 0.8343927 0.7572403 0.80143660 0.78583074 0.794106 0.8142119 0.8574458 0.8617121 0.8450663 0.8401750 0.8596027 6 0.8128841 0.849668 -2.6280e-02 11 0.705188 0.713386 -0.00819798 9.7783e-01 4.7203e-02 weaklyHypometh 1.000000 0.925540 insignificant 0.99650582 0.06056088 insignificant 1.00000 1.00000 insignificant -0.02267166 0.2679469 insignificant 1.00000 insignificant 0.8136986 0.8403990 -0.01423874 11 0.778918 0.7687817 0.0101366 6.1343e-01 1.7792e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.6869e-01 1.5867e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0070064 7.3755e-01 insignificant 1.0000e+00 insignificant 0.8134277 0.8501763 -0.05031508 11 0.749156 0.8029551 -0.05379876 9.9974e-01 2.7361e-03 weaklyHypometh 1.0000e+00 9.5790e-02 weaklyHypometh 9.9960e-01 2.6825e-03 weaklyHypometh 1.0000e+00 1.3412e-01 insignificant -5.5388e-02 3.0705e-02 weaklyHypometh 0.5356660 insignificant 0.852375 0.8403990 0.01089387 11 0.7924443 0.7687817 0.02366266 1.9349e-01 5.2617e-01 insignificant 9.3929e-01 1.0000e+00 insignificant 3.9320e-01 8.6423e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0156653 3.7983e-01 insignificant 1.0000e+00 insignificant 0.852259 0.8501763 -0.01973806 11 0.7733967 0.8029551 -0.02955836 9.6216e-01 2.2453e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.5339e-01 5.8601e-01 insignificant 1.0000e+00 1.00000000 insignificant -3.2717e-02 1.3733e-01 insignificant 1.0000000 insignificant 0.8410982 0.8500882 -2.8310e-02 11 0.8279187 0.7877978 0.0401209 2.8945e-01 3.0333e-02 weaklyHypometh 1.0000e+00 2.1064e-01 insignificant 5.8441e-01 1.5059e-01 insignificant 1.0000e+00 9.4118e-01 insignificant -0.04838189 4.5826e-02 weaklyHypometh 3.7563e-01 insignificant chr9 138629334 138630334 34925 NOTCH1 ENSG00000148400 0.8929225 258 9 0.802994 488 9 0.8139014 255 8 0.837093 143 9 0.910964 149 8 0.905777 300 9 0.831927 301 9 0.806458 311 9 0.8657375 222 9 0.8440716 176 7 0.761990 313 9 0.9469668 184 8 0.8486649 309 8 0.803571 14 1 0.8252108 277 8 0.6245497 112 7 0.8710999 96 6 0.7226511 160 9 0.8354421 251 9 0.856270 238 9 0.821853 120 8 0.9125000 25 1 0.7478288 272 8 0.9113210 119 9 0.685526 133 4 0.8193089 407 9 0.726821 145 9 0.805864 103 8 0.7818134 391 9 0.8497302 386 9 0.8615535 641 9 0.8534550 342 9 0.7827699 241 9 0.6893980 269 9 0.4280437 155 7 0.748120 81 7 0.611534 145 9 0.7339060 372 9 0.9115724 194 8 0.9311438 314 9 0.8854503 149 8 0.8458982 308 8 0.8427414 192 9 0.9391889 0.8704132 0.8630473 0.8882064 0.9157429 0.922443 0.8763364 0.8761868 0.8913593 0.9331690 0.8696475 0.9387991 0.8955956 0.8674678 0.9103574 0.6349159 0.8591888 0.8079862 0.9029923 0.8496442 0.7961666 0.9002003 0.8759984 0.8880359 0.8068579 0.8671028 0.81450380 0.805852 0.9253409 0.8970354 0.9129082 0.8909410 0.8254638 0.7129728 0.59451694 0.88292318 0.725589 0.8547027 0.9564389 0.9611305 0.9020306 0.9011701 0.9143139 7 0.8753292 0.875365 -8.7577e-03 9 0.811586 0.805678 0.00590862 8.1414e-01 1.2715e-01 insignificant 1.000000 1.000000 insignificant 0.37871760 0.07919200 insignificant 1.00000 1.00000 insignificant 0.01561527 0.5486007 insignificant 1.00000 insignificant 0.8753292 0.6832937 0.16121749 9 0.811586 0.6596230 0.1519635 1.2882e-11 3.1440e-01 weaklyHypermeth 1.5710e-10 1.0000e+00 weaklyHypermeth 1.6219e-03 1.9760e-01 weaklyHypermeth 1.5595e-02 1.0000e+00 weaklyHypermeth 0.1647846 2.5572e-02 weaklyHypermeth 2.2237e-01 insignificant 0.8757969 0.9265341 -0.04910736 9 0.838271 0.8840683 -0.04579755 9.9948e-01 4.4388e-05 weaklyHypometh 1.0000e+00 4.4388e-03 weaklyHypometh 9.9946e-01 1.3326e-04 weaklyHypometh 1.0000e+00 1.3326e-02 weaklyHypometh -5.2948e-02 4.5246e-02 weaklyHypometh 0.6653776 insignificant 0.875365 0.6832937 0.19389893 9 0.8056779 0.6596230 0.14605490 6.6653e-09 6.6529e-01 weaklyHypermeth 7.4891e-08 1.0000e+00 weaklyHypermeth 7.5290e-04 2.7360e-01 weaklyHypermeth 8.0096e-03 1.0000e+00 weaklyHypermeth 0.1491693 3.6962e-02 weaklyHypermeth 2.8215e-01 insignificant 0.877651 0.9265341 -0.03996302 9 0.8465865 0.8840683 -0.03748173 9.8258e-01 6.6227e-03 weaklyHypometh 1.0000e+00 3.0570e-01 insignificant 9.6755e-01 4.3006e-03 weaklyHypometh 1.0000e+00 0.39096745 insignificant -6.8563e-02 2.3341e-02 weaklyHypometh 0.5445680 insignificant 0.6852146 0.9265341 -1.9644e-01 9 0.7106922 0.8840683 -0.1733761 9.7437e-01 1.0964e-05 weaklyHypometh 1.0000e+00 1.3705e-04 weaklyHypometh 8.3930e-01 1.8307e-03 weaklyHypometh 1.0000e+00 2.3470e-02 weaklyHypometh -0.21773261 8.0092e-03 weaklyHypometh 1.1954e-01 insignificant chr9 138660834 138661834 34926 ENSG00000203275 0.8342101 578 23 0.716679 603 20 0.7257639 689 23 0.831706 554 18 0.708760 406 22 0.850087 777 21 0.758791 589 21 0.825478 646 23 0.7242174 591 23 0.8029345 646 23 0.871080 823 23 0.7941764 432 21 0.7331268 851 23 0.829784 266 11 0.7825917 628 23 0.7834975 348 19 0.6665314 208 16 0.7527251 696 23 0.9073186 582 23 0.758372 556 22 0.725401 312 19 0.6279784 297 18 0.8242641 549 22 0.7686871 353 21 0.823485 229 14 0.8002184 641 23 0.779639 345 21 0.726285 294 18 0.8004842 459 23 0.8049327 815 23 0.8382705 988 23 0.8902091 796 23 0.5871292 594 23 0.6196665 595 23 0.4001508 501 11 0.535497 159 13 0.597358 458 24 0.4313550 810 23 0.6802476 486 23 0.7759537 643 23 0.7627429 433 18 0.6589686 568 21 0.7505279 483 19 0.8632063 0.7542615 0.7982690 0.8779897 0.8092839 0.879078 0.8252191 0.8871915 0.8200687 0.8754402 0.8852303 0.8307093 0.8042514 0.8639489 0.8418545 0.8051494 0.8061502 0.8151242 0.9083241 0.8683433 0.8432738 0.6896879 0.8833757 0.8302522 0.8776880 0.8553044 0.85040600 0.830449 0.8244029 0.8524886 0.8428036 0.9018733 0.6097996 0.5900424 0.54218681 0.52365835 0.669158 0.4302687 0.7668410 0.7987337 0.7695599 0.7518139 0.8266766 13 0.8325050 0.833169 -1.3517e-02 23 0.743110 0.783988 -0.04087808 9.7023e-01 1.3270e-01 insignificant 1.000000 1.000000 insignificant 0.97444191 0.22765804 insignificant 1.00000 1.00000 insignificant -0.00126322 0.9581542 insignificant 1.00000 insignificant 0.8326206 0.5094642 0.29652651 23 0.743712 0.5007938 0.2429183 1.4147e-54 1.0000e+00 hypermethylated 1.0883e-52 1.0000e+00 hypermethylated 1.1357e-19 1.0000e+00 hypermethylated 1.2618e-17 1.0000e+00 hypermethylated 0.2543652 5.5401e-04 hypermethylated 8.9357e-03 hypermethylated 0.8327806 0.7856869 0.06696041 21 0.763712 0.7025174 0.06119468 7.8479e-10 7.9540e-01 weaklyHypermeth 8.7199e-08 1.0000e+00 weaklyHypermeth 5.1761e-05 5.0184e-01 weaklyHypermeth 3.0447e-03 1.0000e+00 weaklyHypermeth 5.7203e-02 7.3490e-02 insignificant 0.8989882 insignificant 0.833086 0.5094642 0.31037281 23 0.7660669 0.5007938 0.26527315 1.4555e-38 1.0000e+00 hypermethylated 8.5617e-37 1.0000e+00 hypermethylated 7.4788e-17 1.0000e+00 hypermethylated 8.2321e-15 1.0000e+00 hypermethylated 0.2556284 3.4800e-04 hypermethylated 6.6923e-03 hypermethylated 0.833471 0.7856869 0.08436528 21 0.7980669 0.7025174 0.09554956 8.8060e-11 7.0706e-01 weaklyHypermeth 9.4639e-09 1.0000e+00 weaklyHypermeth 7.1870e-05 8.8302e-01 weaklyHypermeth 4.4919e-03 1.00000000 weaklyHypermeth 5.8466e-02 8.4923e-02 insignificant 1.0000000 insignificant 0.5096277 0.7859877 -2.4249e-01 21 0.5216602 0.7317890 -0.2101287 9.9978e-01 1.7699e-11 hypomethylated 1.0000e+00 4.7836e-10 hypomethylated 1.0000e+00 2.9910e-07 hypomethylated 1.0000e+00 1.2462e-05 hypomethylated -0.19716196 2.0758e-03 weaklyHypometh 4.6128e-02 weaklyHypometh chr9 138693934 138694934 34927 MIR126 ENSG00000199161 0.6942433 84 6 0.587085 83 6 0.6793651 50 6 0.681809 56 3 0.458333 19 1 0.648850 95 6 0.483333 42 3 0.632138 77 6 0.6353741 45 6 0.7202381 44 6 0.764069 116 6 0.8333333 10 0 0.6313492 29 3 0.575000 31 4 0.6964286 27 2 0.6000000 8 0 0.6666667 3 0 0.5010101 62 6 0.7754630 62 6 0.652778 41 5 0.503968 26 1 0.5000000 3 0 0.8333333 33 2 0.5821429 29 4 0.514354 73 2 0.6457117 105 6 0.616667 26 2 0.566667 15 1 0.7063218 68 4 0.7063370 92 6 0.6847985 102 6 0.7260684 63 6 0.6855640 72 6 0.6467593 49 5 0.7757653 86 5 0.545455 49 2 0.554131 63 6 0.6998016 108 6 0.6149270 70 5 0.5938466 75 6 0.6560185 73 6 0.6944444 28 1 0.4976301 71 5 0.7624691 0.6347636 0.6598485 0.7337964 0.5378788 0.706791 0.6022727 0.7070852 0.6482684 0.7637987 0.7517218 0.8636364 0.6558442 0.6954545 0.7208510 0.6790490 0.7193501 0.6158402 0.8136273 0.7083333 0.6849747 0.6671872 0.8863636 0.7242424 0.6234232 0.7773118 0.66022727 0.786856 0.6574582 0.7417832 0.7622378 0.7927739 0.7512052 0.7114899 0.76181006 0.67968279 0.615579 0.6973936 0.6939317 0.6161452 0.7308712 0.7803030 0.6139754 0 0.6859756 0.717703 -3.6985e-02 6 0.675587 0.597695 0.07789224 9.7993e-01 1.2241e-01 insignificant 1.000000 1.000000 insignificant 0.63424383 0.22040710 insignificant 1.00000 1.00000 insignificant 0.01364595 0.7138672 lowCoverage 1.00000 lowCoverage 0.6863544 0.6393443 0.02753030 6 0.700671 0.6754874 0.0251834 6.1335e-01 9.3915e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.8129e-01 6.7807e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0054026 9.0094e-01 lowCoverage 1.0000e+00 lowCoverage 0.6863544 0.6750789 0.05402231 5 0.700671 0.6416024 0.05906842 1.1909e-01 7.4204e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.0432e-01 7.6992e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.4470e-02 4.0961e-01 lowCoverage 1.0000000 lowCoverage 0.717949 0.6393443 0.09524654 6 0.5878416 0.6754874 -0.08764582 1.0194e-01 9.8632e-01 insignificant 5.4223e-01 1.0000e+00 insignificant 3.8624e-01 8.7342e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0190485 6.9315e-01 lowCoverage 1.0000e+00 lowCoverage 0.717949 0.6750789 0.11896263 5 0.5878416 0.6416024 -0.05376080 7.2153e-03 9.7140e-01 weaklyHypermeth 1.2918e-01 1.0000e+00 insignificant 1.7222e-01 8.8703e-01 insignificant 1.0000e+00 1.00000000 insignificant 2.0824e-02 6.5108e-01 lowCoverage 1.0000000 lowCoverage 0.6393443 0.6750789 3.4896e-02 5 0.6754874 0.6416024 0.0338850 3.6187e-01 5.8469e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.9236e-01 4.8211e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03987260 4.3950e-01 lowCoverage 1.0000e+00 lowCoverage chr9 138715734 138716734 34930 ENSG00000221693 0.7597042 124 8 0.522619 158 8 0.8300044 176 9 0.827268 159 8 0.729385 92 8 0.716724 201 9 0.728995 105 7 0.696154 174 9 0.6565201 100 7 0.7592424 108 10 0.592586 302 9 0.7011742 80 8 0.6087714 205 9 NA 0 0 0.3429077 182 9 0.5749719 71 8 0.5333333 68 5 0.6954762 181 8 0.7630270 192 8 0.583331 120 9 0.589035 63 4 0.6968254 99 8 0.6203476 100 7 0.5193362 74 8 0.620370 79 5 0.6350602 265 9 0.615776 125 10 0.655026 43 5 0.7047087 218 8 0.1627244 305 9 0.6868873 413 9 0.7180235 164 8 0.2531793 292 9 0.3651602 227 9 0.6111111 50 5 0.137854 101 5 0.288492 51 7 0.2608656 175 9 0.6334052 168 6 0.8344021 144 8 0.6776725 129 8 0.7232020 182 8 0.7561750 170 8 0.8396231 0.5575191 0.7880498 0.8414996 0.7775403 0.707800 0.6969293 0.7462032 0.7028578 0.8305856 0.6109065 0.7455841 0.5867405 NA 0.3258864 0.4661642 0.6053787 0.7692327 0.7387102 0.5273977 0.5942489 0.7346410 0.6867225 0.4957181 0.7367012 0.5435443 0.70999951 0.720454 0.7689976 0.1478165 0.7387948 0.8298808 0.1983802 0.3585151 0.70466321 0.18538603 0.313379 0.2971706 0.7411666 0.8457675 0.7039789 0.7017658 0.7809670 4 0.6658327 0.601129 6.1859e-02 9 0.646312 0.581109 0.06520275 2.6462e-02 9.9643e-01 weaklyHypermeth 1.000000 1.000000 insignificant 0.17096128 0.77295380 insignificant 1.00000 1.00000 insignificant 0.06231605 0.2373081 insignificant 1.00000 insignificant 0.6658327 0.2756696 0.38299999 9 0.646312 0.3036362 0.3426760 2.8620e-27 1.0000e+00 hypermethylated 8.1773e-26 1.0000e+00 hypermethylated 7.2052e-11 1.0000e+00 hypermethylated 2.1834e-09 1.0000e+00 hypermethylated 0.3448824 1.9616e-03 weaklyHypermeth 2.5810e-02 weaklyHypermeth 0.6658327 0.7641866 -0.09481645 8 0.646312 0.7339986 -0.08768637 9.9748e-01 1.9106e-03 weaklyHypometh 1.0000e+00 7.6424e-02 weaklyHypometh 9.8314e-01 5.8367e-03 weaklyHypometh 1.0000e+00 2.5377e-01 insignificant -6.0645e-02 1.9868e-01 insignificant 1.0000000 insignificant 0.601129 0.2756696 0.32724823 9 0.5811095 0.3036362 0.27747326 9.9797e-12 1.0000e+00 hypermethylated 1.4895e-10 1.0000e+00 hypermethylated 1.7404e-07 1.0000e+00 hypermethylated 3.4126e-06 1.0000e+00 hypermethylated 0.2825664 5.2902e-03 weaklyHypermeth 5.8780e-02 weaklyHypermeth 0.601129 0.7641866 -0.16558023 8 0.5811095 0.7339986 -0.15288912 9.9878e-01 6.1019e-04 weaklyHypometh 1.0000e+00 6.1019e-02 weaklyHypometh 9.9224e-01 2.2467e-03 weaklyHypometh 1.0000e+00 0.32095221 insignificant -1.2296e-01 4.2524e-02 weaklyHypometh 0.8548017 insignificant 0.2756696 0.7641866 -5.0815e-01 8 0.3036362 0.7339986 -0.4303624 1.0000e+00 4.8479e-20 hypomethylated 1.0000e+00 2.4240e-18 hypomethylated 1.0000e+00 7.7818e-07 hypomethylated 1.0000e+00 2.9254e-05 hypomethylated -0.40552768 7.5963e-04 hypomethylated 2.1704e-02 hypomethylated chr9 138754634 138755634 34931 ENSG00000212487 0.8524004 622 18 0.840073 284 16 0.7748102 324 16 0.873694 824 19 0.805038 291 17 0.874449 866 19 0.857946 455 19 0.910769 387 18 0.8153244 555 16 0.7674348 256 13 0.849623 341 17 0.7989535 237 13 0.8691329 324 16 0.875952 228 16 0.8602268 422 16 0.9566193 250 15 0.7467647 85 7 0.8042380 1525 19 0.8551987 453 18 0.881578 576 19 0.913603 163 9 0.8082020 450 13 0.9069665 415 20 0.9404608 247 17 0.937349 764 18 0.8355914 444 19 0.833799 277 18 0.760825 222 13 0.8169129 338 16 0.9113835 362 19 0.8757753 636 19 0.8636976 744 19 0.3051142 547 19 0.2142275 497 15 0.2343382 490 15 0.374213 393 15 0.291821 377 17 0.3912740 852 20 0.8718788 550 19 0.8961064 479 19 0.8606521 376 16 0.8860156 1037 18 0.8511678 630 19 0.9144294 0.8101910 0.8519050 0.9149509 0.9058556 0.904989 0.8942407 0.9055408 0.8564583 0.8391423 0.8764660 0.8862846 0.9124250 0.9159586 0.9196655 0.9362279 0.8502704 0.8734906 0.8793130 0.9177152 0.9152292 0.8774585 0.9012655 0.9422964 0.9379205 0.9092699 0.84658515 0.917080 0.8666656 0.9552644 0.9183886 0.9218253 0.2606917 0.2179156 0.33722985 0.38983114 0.319160 0.3349764 0.9277453 0.8968134 0.8953170 0.8784833 0.8705785 13 0.8887454 0.914393 -2.4228e-02 19 0.835298 0.820545 0.01475307 9.9970e-01 1.2731e-02 weaklyHypometh 1.000000 0.565848 insignificant 0.99965304 0.02369638 weaklyHypometh 1.00000 1.00000 insignificant -0.02353584 0.2507470 insignificant 1.00000 insignificant 0.8891162 0.2461977 0.61603076 19 0.863240 0.3262756 0.5369644 6.7874e-175 1.0000e+00 hypermethylated 2.2625e-172 1.0000e+00 hypermethylated 3.4469e-30 1.0000e+00 hypermethylated 8.6172e-28 1.0000e+00 hypermethylated 0.5416801 9.9085e-07 hypermethylated 3.6698e-05 hypermethylated 0.8899073 0.8883464 -0.00078512 19 0.896262 0.8744190 0.02184279 1.3126e-01 4.4192e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.7163e-01 2.1852e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -2.9653e-02 4.6913e-02 weaklyHypometh 0.6701876 insignificant 0.914738 0.2461977 0.62444561 19 0.8680908 0.3262756 0.54181521 1.7087e-131 1.0000e+00 hypermethylated 4.2717e-129 1.0000e+00 hypermethylated 6.5028e-27 1.0000e+00 hypermethylated 1.6257e-24 1.0000e+00 hypermethylated 0.5652160 1.0558e-07 hypermethylated 6.5146e-06 hypermethylated 0.915379 0.8883464 0.02279739 19 0.8983068 0.8744190 0.02388786 2.4056e-03 9.4856e-01 weaklyHypermeth 4.8111e-02 1.0000e+00 weaklyHypermeth 3.1179e-02 8.4138e-01 weaklyHypermeth 5.5676e-01 1.00000000 insignificant -6.1170e-03 7.4319e-01 insignificant 1.0000000 insignificant 0.2463538 0.8883464 -6.3961e-01 19 0.3559370 0.8744190 -0.5184820 1.0000e+00 3.5638e-67 hypomethylated 1.0000e+00 8.9094e-65 hypomethylated 1.0000e+00 4.7180e-17 hypomethylated 1.0000e+00 1.1795e-14 hypomethylated -0.57133292 2.1110e-06 hypomethylated 3.1533e-04 hypomethylated chr9 138873634 138874634 34932 MAMDC4 ENSG00000177943 0.8391813 87 5 0.725214 64 5 0.6476190 50 3 0.941375 111 3 0.897949 40 3 0.864418 103 5 0.952381 65 5 0.892605 61 5 0.7067873 34 2 0.9568627 41 3 0.746516 77 5 0.7310101 38 5 0.9402174 69 2 0.870455 30 3 0.8603175 30 3 0.8000000 17 1 0.7500000 4 0 0.6304598 89 4 0.9414141 35 3 0.935049 65 3 0.927273 30 3 0.9060363 65 3 0.6539487 51 3 0.8578824 66 5 0.902585 147 5 0.9561905 86 6 0.594269 63 3 1.000000 16 2 0.9282353 42 5 0.9426235 91 5 0.8270975 123 5 0.8367003 90 5 0.6864416 71 5 0.3780303 86 5 0.6428571 50 3 0.458693 194 5 0.711310 71 5 0.7103896 153 7 0.6989686 87 4 0.8682540 93 4 0.8817460 72 3 0.8066520 59 3 0.9730007 111 6 0.7853186 0.7566817 0.5879699 0.8722451 0.8158165 0.752306 0.9248120 0.8171252 0.7721362 0.9198762 0.8118533 0.7385540 0.8907323 0.8191388 0.8731830 0.5684211 NA 0.7950030 0.8911217 0.8515480 0.9004785 0.8728098 0.7647287 0.8171641 0.8479266 0.8740050 0.66833487 0.981923 0.9135604 0.8607381 0.8384712 0.8578416 0.6529433 0.4973206 0.67003772 0.48618006 0.798465 0.4934928 0.7380088 0.8461988 0.8008020 0.7778393 0.9466381 2 0.8288288 0.859770 -2.8365e-02 3 0.827098 0.893508 -0.06640996 9.3050e-01 2.9951e-01 lowCoverage 1.000000 1.000000 lowCoverage 0.84620879 0.53330366 lowCoverage 1.00000 1.00000 lowCoverage -0.02957850 0.4938206 lowCoverage 1.00000 lowCoverage 0.8288288 0.5842697 0.27214827 3 0.827098 0.6981939 0.1289039 1.1357e-07 9.9606e-01 lowCoverage 1.1472e-06 1.0000e+00 lowCoverage 3.7144e-04 9.9934e-01 lowCoverage 4.0818e-03 1.0000e+00 lowCoverage 0.2335380 8.2955e-03 lowCoverage 8.2955e-02 lowCoverage 0.8288288 0.8459716 -0.02294820 3 0.827098 0.7727124 0.05438538 8.7586e-01 4.3843e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.7125e-01 8.0236e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -1.4233e-02 7.8967e-01 lowCoverage 1.0000000 lowCoverage 0.859770 0.5842697 0.30082627 5 0.8935078 0.6981939 0.19531386 1.3145e-06 9.9976e-01 hypermethylated 1.3552e-05 1.0000e+00 hypermethylated 3.0216e-03 9.9997e-01 weaklyHypermeth 2.6740e-02 1.0000e+00 weaklyHypermeth 0.2631165 4.1407e-03 lowCoverage 4.7595e-02 lowCoverage 0.859770 0.8459716 0.00505462 3 0.8935078 0.7727124 0.12079534 8.8581e-01 7.7159e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.6484e-01 8.7986e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 1.5346e-02 7.9509e-01 lowCoverage 1.0000000 lowCoverage 0.5842697 0.8459716 -3.2615e-01 3 0.6981939 0.7727124 -0.0745185 9.9915e-01 2.0667e-03 lowCoverage 1.0000e+00 1.7931e-02 lowCoverage 9.9905e-01 1.7468e-02 lowCoverage 1.0000e+00 1.6026e-01 lowCoverage -0.24777075 8.8490e-03 lowCoverage 1.2641e-01 lowCoverage chr9 138941334 138942334 34935 TRAF2 ENSG00000127191 0.9833333 45 4 0.871587 146 4 0.8622634 129 5 1.000000 8 0 0.971852 118 4 0.930556 47 5 0.932867 125 5 0.927651 139 5 0.9089310 108 5 0.9422065 140 5 0.911602 166 5 0.8285278 89 5 0.9293434 193 5 NA 0 0 0.9442994 159 5 0.9305556 56 5 0.8469697 38 4 0.9000000 30 4 0.9536490 178 5 0.950000 59 5 0.946667 40 4 1.0000000 4 0 0.8981225 90 5 0.8810924 69 5 0.900000 9 0 0.9623737 210 5 0.971429 45 5 0.938095 26 3 0.9795956 161 4 0.9341172 214 5 0.9651952 302 5 0.9532468 81 5 0.9448752 140 5 0.9020316 167 5 1.0000000 47 4 0.866667 11 0 0.980000 40 5 0.9774603 145 5 1.0000000 11 0 0.9755556 69 4 0.7166667 15 0 1.0000000 15 0 1.0000000 21 2 0.9772727 0.8554834 0.8693609 0.9900975 0.9683502 0.945707 0.9224412 0.9572860 0.9138264 0.9278044 0.9283210 0.8052493 0.9380395 NA 0.9631631 0.9368687 0.8443526 0.9090909 0.9580464 0.9772727 0.9272727 0.9934111 0.9003324 0.8898014 0.9090909 0.9524793 0.98701299 0.945887 0.9744486 0.9419673 0.9588520 0.9492326 0.9389483 0.8771112 0.99393939 0.87878788 0.972727 0.9743146 1.0000000 0.9727273 0.6742424 1.0000000 1.0000000 0 0.9249873 0.946443 -2.0451e-02 5 0.917273 0.941877 -0.02460369 9.9100e-01 8.4245e-02 insignificant 1.000000 1.000000 insignificant 0.99236560 0.08399869 insignificant 1.00000 1.00000 insignificant -0.02172991 0.1492141 lowCoverage 1.00000 lowCoverage 0.9249873 0.9345455 -0.00885274 5 0.917273 0.9401918 -0.0229190 7.8834e-01 9.4907e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8199e-01 8.6912e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0227410 3.6206e-01 lowCoverage 1.0000e+00 lowCoverage 0.9249873 0.9465649 -0.02179044 4 0.917273 0.9543280 -0.03705523 9.5139e-01 4.2119e-02 lowCoverage 1.0000e+00 6.6855e-01 lowCoverage 9.9824e-01 1.7237e-02 lowCoverage 1.0000e+00 4.9249e-01 lowCoverage -1.6013e-02 7.9040e-01 lowCoverage 1.0000000 lowCoverage 0.946443 0.9345455 0.01213858 5 0.9418765 0.9401918 0.00168465 5.4093e-01 4.5449e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.2292e-01 4.4141e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0010111 9.6674e-01 lowCoverage 1.0000e+00 lowCoverage 0.946443 0.9465649 -0.00124695 4 0.9418765 0.9543280 -0.01245154 6.6229e-01 2.1247e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.7095e-01 9.6530e-02 lowCoverage 1.0000e+00 1.00000000 lowCoverage 5.7167e-03 9.2411e-01 lowCoverage 1.0000000 lowCoverage 0.9345455 0.9465649 -1.4199e-02 4 0.9401918 0.9543280 -0.0141362 7.7067e-01 5.4279e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.2953e-01 4.9324e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.00672786 9.1424e-01 lowCoverage 1.0000e+00 lowCoverage chr9 139231834 139232834 34938 NDOR1 ENSG00000188566 0.8948511 209 15 0.816645 183 15 0.7785857 315 15 0.859485 268 13 0.843182 221 16 0.853642 350 15 0.770872 213 13 0.847577 244 16 0.7982411 227 14 0.8759497 319 14 0.817779 493 15 0.7965435 157 14 0.8588461 469 14 0.919643 131 7 0.8950627 304 14 0.7886364 116 13 0.8080026 78 10 0.7616466 282 14 0.9082475 644 17 0.926664 370 15 0.687540 162 16 0.9104661 165 7 0.9054553 236 14 0.9565719 234 12 0.754259 145 8 0.8860549 307 15 0.791839 428 14 0.702129 132 12 0.8705648 352 15 0.9165652 292 15 0.8668124 340 15 0.9285771 385 15 0.6471086 250 15 0.7240818 398 15 0.5138543 183 9 0.876073 85 11 0.571957 209 15 0.8082129 353 15 0.8404061 241 14 0.8718873 372 15 0.8566761 160 10 0.7847071 321 13 0.8266256 180 15 0.9329811 0.8589522 0.7723722 0.9254285 0.8116018 0.895111 0.8304964 0.9005410 0.8746356 0.9167831 0.9116569 0.8568540 0.9488394 0.9025591 0.9154277 0.8730565 0.7590518 0.9043050 0.9613948 0.9344083 0.8394547 0.9018756 0.9475236 0.9118722 0.8781892 0.8768930 0.86181363 0.811963 0.9148585 0.9512717 0.9289614 0.9118516 0.6306688 0.7943942 0.81131645 0.85390210 0.635009 0.8184402 0.9004613 0.9441352 0.9247170 0.9059250 0.9083102 7 0.8991055 0.890428 4.9117e-03 15 0.810649 0.799465 0.01118351 5.6583e-01 3.9248e-01 insignificant 1.000000 1.000000 insignificant 0.95280349 0.43824274 insignificant 1.00000 1.00000 insignificant -0.00706435 0.8088953 insignificant 1.00000 insignificant 0.8995883 0.7115775 0.15839326 15 0.855685 0.6736457 0.1820392 2.4165e-17 9.9997e-01 weaklyHypermeth 4.2394e-16 1.0000e+00 weaklyHypermeth 1.1985e-05 9.9993e-01 weaklyHypermeth 1.6880e-04 1.0000e+00 weaklyHypermeth 0.1507905 4.4439e-02 weaklyHypermeth 3.5647e-01 insignificant 0.8995883 0.9160126 -0.01309427 14 0.855685 0.8586006 -0.00291575 1.2273e-01 1.7632e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.6913e-01 2.5343e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.9447e-03 7.9831e-01 insignificant 1.0000000 insignificant 0.891866 0.7110961 0.15647940 15 0.8520969 0.6381906 0.21390628 1.8445e-12 1.0000e+00 weaklyHypermeth 2.9278e-11 1.0000e+00 weaklyHypermeth 1.9177e-05 1.0000e+00 weaklyHypermeth 2.8623e-04 1.0000e+00 weaklyHypermeth 0.1578548 3.8546e-02 weaklyHypermeth 2.9202e-01 insignificant 0.891832 0.9160126 -0.01709619 14 0.8438801 0.8586006 -0.01472057 6.8328e-02 7.9061e-02 insignificant 7.6773e-01 1.0000e+00 insignificant 2.7805e-01 3.9102e-01 insignificant 1.0000e+00 1.00000000 insignificant 1.2009e-02 6.9706e-01 insignificant 1.0000000 insignificant 0.7115775 0.9160126 -1.7222e-01 14 0.6736457 0.8586006 -0.1849550 9.9993e-01 8.3199e-07 weaklyHypometh 1.0000e+00 1.2418e-05 weaklyHypometh 9.9973e-01 1.8105e-03 weaklyHypometh 1.0000e+00 2.3470e-02 weaklyHypometh -0.14584581 4.9630e-02 weaklyHypometh 3.9389e-01 insignificant chr9 139425534 139426534 34941 NRARP ENSG00000198435 0.8045298 400 15 0.665086 385 19 0.5720880 393 18 0.781635 359 15 0.681408 235 14 0.730886 494 18 0.625126 421 17 0.624089 425 16 0.6195722 342 17 0.7105519 316 16 0.860884 543 18 0.5877465 270 15 0.5708010 423 20 0.795931 160 12 0.6039161 402 17 0.4903588 127 14 0.7331734 120 11 0.6526893 577 15 0.5639627 534 19 0.707345 390 18 0.608730 238 18 0.6951046 269 14 0.6242505 286 17 0.5938894 186 12 0.676589 381 12 0.7534579 495 18 0.640710 363 17 0.499115 178 11 0.6586337 488 18 0.6420081 509 19 0.8723272 743 20 0.8268945 409 17 0.5258676 345 17 0.6217141 487 20 0.5692955 535 11 0.299820 147 12 0.557226 254 15 0.4194878 509 17 0.7246049 431 17 0.7529833 426 19 0.6978310 271 13 0.7301634 512 15 0.6148329 412 14 0.8337842 0.6735558 0.6210336 0.8906197 0.7241508 0.799638 0.7747485 0.7625661 0.6836414 0.8202235 0.8345991 0.7588397 0.5996827 0.7957771 0.6592148 0.6788040 0.7400925 0.6059538 0.5598937 0.7777355 0.6801492 0.6486177 0.7609490 0.7061080 0.7763095 0.7927291 0.70214939 0.727804 0.7260070 0.6415633 0.8286975 0.8786424 0.5691310 0.6426863 0.66110488 0.46853551 0.614236 0.2783605 0.7921736 0.8228913 0.7811555 0.7746861 0.6502551 9 0.7194471 0.750276 -2.9602e-02 15 0.591702 0.585874 0.00582834 9.1799e-01 1.1337e-01 insignificant 1.000000 1.000000 insignificant 0.96831000 0.63094160 insignificant 1.00000 1.00000 insignificant -0.00522025 0.8877089 insignificant 1.00000 insignificant 0.7199452 0.5576585 0.16734472 15 0.606149 0.5219292 0.0842196 1.0417e-15 8.7883e-01 weaklyHypermeth 1.6276e-14 1.0000e+00 weaklyHypermeth 6.2523e-07 9.5970e-01 weaklyHypermeth 1.0780e-05 1.0000e+00 weaklyHypermeth 0.1701870 1.4441e-02 weaklyHypermeth 1.3371e-01 insignificant 0.7194136 0.7480507 -0.04002961 14 0.587970 0.6482356 -0.06026565 9.9479e-01 3.2828e-02 weaklyHypometh 1.0000e+00 5.6600e-01 insignificant 9.9944e-01 9.7378e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -3.4994e-02 2.9908e-01 insignificant 1.0000000 insignificant 0.750552 0.5573123 0.19136155 15 0.5749399 0.5046434 0.07029646 2.2930e-14 9.9518e-01 weaklyHypermeth 4.1690e-13 1.0000e+00 weaklyHypermeth 4.6648e-05 9.9430e-01 weaklyHypermeth 6.3038e-04 1.0000e+00 weaklyHypermeth 0.1754073 1.3033e-02 weaklyHypermeth 1.2904e-01 insignificant 0.751439 0.7482927 -0.01018094 15 0.6264675 0.6592160 -0.03274855 9.5761e-01 3.4344e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9783e-01 1.3881e-01 insignificant 1.0000e+00 1.00000000 insignificant -2.9774e-02 4.4754e-01 insignificant 1.0000000 insignificant 0.5582524 0.7490234 -1.9012e-01 14 0.5445337 0.6845705 -0.1400368 9.6100e-01 1.8381e-09 weaklyHypometh 1.0000e+00 3.9959e-08 weaklyHypometh 9.9993e-01 2.8046e-05 weaklyHypometh 1.0000e+00 6.6776e-04 weaklyHypometh -0.20518121 6.3226e-03 weaklyHypometh 1.0198e-01 insignificant chr9 139496134 139497134 34943 NELF ENSG00000165802 0.7999004 269 5 0.958487 111 5 0.9821429 37 4 0.984151 197 5 0.858421 79 4 0.941372 359 5 0.916400 61 5 0.959479 121 5 0.9843750 38 4 0.9571429 63 5 0.947275 197 5 NA 0 0 0.8862573 79 4 0.930476 84 4 0.9706805 143 5 1.0000000 4 0 NA 0 0 0.9518065 508 4 0.9243611 207 5 0.972700 215 4 0.954167 124 4 1.0000000 13 0 0.9214099 145 4 0.7201923 110 4 0.782073 68 4 0.9743107 206 5 0.975119 113 5 0.722222 14 0 0.8670555 183 5 0.9827898 216 5 0.9802458 271 5 0.9522369 184 5 0.8281640 137 4 0.9791667 133 5 0.8000000 25 4 1.000000 5 1 0.812500 69 4 0.8793522 162 5 0.9604301 122 4 0.8808879 186 5 0.9876016 164 4 0.7240061 433 4 0.7955342 158 5 0.9505158 0.9174401 0.9735577 0.9666986 0.9481275 0.969060 0.8455375 0.9532958 0.9735577 0.9436813 0.9356607 NA 0.9242578 0.9151099 0.9414581 1.0000000 NA 0.9395713 0.9047515 0.9606248 0.9467147 1.0000000 0.8973937 0.9312130 0.8791855 0.9728364 0.95514652 0.807692 0.9101101 0.9794822 0.9605972 0.9585857 0.7883587 0.9570513 1.00000000 NA 0.955529 0.9721919 0.9506203 0.9811043 0.9785413 0.9550106 0.9629389 0 0.9440635 0.942002 6.8416e-04 5 0.964121 0.904893 0.05922825 4.2001e-01 9.6123e-01 insignificant 1.000000 1.000000 insignificant 0.66273518 0.85386237 insignificant 1.00000 1.00000 insignificant 0.03764976 0.2628050 lowCoverage 1.00000 lowCoverage 0.9440635 0.9094340 0.03423461 4 0.964121 0.9286211 0.0354999 1.4180e-01 9.9998e-01 lowCoverage 7.1256e-01 1.0000e+00 lowCoverage 9.6339e-01 8.3513e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0571044 1.7664e-01 lowCoverage 1.0000e+00 lowCoverage 0.9437229 0.9651272 -0.02230768 5 0.856996 0.8663187 -0.00932227 9.9979e-01 2.0709e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9884e-01 5.1371e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.0610e-02 2.3045e-01 lowCoverage 1.0000000 lowCoverage 0.942108 0.9077213 0.03520983 4 0.9154602 0.8254410 0.09001924 5.0949e-01 9.8793e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.2502e-01 8.9701e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0194547 6.8329e-01 lowCoverage 1.0000e+00 lowCoverage 0.942144 0.9642185 -0.02067482 5 0.9239142 0.7796868 0.14422735 9.9955e-01 3.3901e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7229e-01 7.4904e-01 insignificant 1.0000e+00 1.00000000 insignificant 3.2960e-02 5.8671e-01 lowCoverage 1.0000000 lowCoverage 0.9077213 0.9651272 -5.5544e-02 4 0.8254410 0.8663187 -0.0408777 1.0000e+00 4.2911e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.9827e-01 9.4706e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.01350517 8.3039e-01 lowCoverage 1.0000e+00 lowCoverage chr9 139696334 139697334 34953 ENSG00000217501 0.6846154 80 7 0.711176 129 4 0.7035714 53 7 0.800510 65 7 0.573454 129 4 0.783425 52 4 0.618005 106 7 0.742437 78 7 0.7436508 44 6 0.7217262 39 3 0.785514 110 7 0.5731293 49 4 0.7720477 83 4 0.696196 88 5 0.6332715 61 6 0.8333333 38 3 0.8279570 359 3 0.7760552 65 6 0.8571429 37 3 0.776531 37 4 0.563988 24 3 0.7115385 38 3 0.5534614 74 4 0.7500000 25 1 0.867063 73 4 0.7265507 148 7 0.695588 43 4 0.642593 26 2 0.6432234 83 7 0.8240741 110 7 0.8766026 101 4 0.6478458 52 6 0.5874297 96 7 0.6880952 75 7 0.6326531 78 7 0.964815 35 3 0.628694 54 4 0.8137464 104 7 0.8051948 71 4 0.8223958 81 7 0.8364899 67 7 0.8750000 40 3 0.7218616 109 7 0.7710726 0.7145279 0.9549296 0.8382294 0.7259222 0.802817 0.7837693 0.7981221 0.8521127 0.8759222 0.8093174 0.7756539 0.7334739 0.7856365 0.8654350 0.8497653 0.7640340 0.9487836 1.0000000 0.7943662 0.5603622 0.7367281 0.8031365 0.9436620 0.8075117 0.7242429 0.69925435 0.799687 0.5799928 0.8497653 0.9248826 0.7297116 0.6776052 0.8524480 0.77665996 0.79574369 0.714638 0.8663778 0.9180538 0.8450704 0.8935837 0.8742455 0.8272688 0 0.7573443 0.742138 -1.0339e-02 7 0.706265 0.743489 -0.03722423 4.2358e-01 2.4412e-01 insignificant 1.000000 1.000000 insignificant 0.42204989 0.82863840 insignificant 1.00000 1.00000 insignificant 0.02214333 0.5457978 lowCoverage 1.00000 lowCoverage 0.7573443 0.7006803 0.02683688 7 0.706265 0.6683198 0.0379448 3.9335e-02 6.8201e-01 weaklyHypermeth 2.2349e-01 1.0000e+00 insignificant 2.4996e-01 6.1645e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0114486 8.5844e-01 insignificant 1.0000e+00 insignificant 0.7573443 0.7765668 -0.05605254 7 0.706265 0.8054667 -0.09920214 9.5338e-01 8.0196e-02 insignificant 1.0000e+00 9.4348e-01 insignificant 9.8618e-01 6.8561e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -8.1501e-02 2.9146e-02 weaklyHypometh 0.5204615 insignificant 0.742462 0.7013575 0.04040934 7 0.7719901 0.7051731 0.06681692 3.4164e-02 7.4265e-01 weaklyHypermeth 2.0335e-01 1.0000e+00 insignificant 4.2594e-01 6.8725e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0106947 8.7595e-01 lowCoverage 1.0000e+00 lowCoverage 0.742462 0.7771739 -0.05048398 7 0.7719901 0.8270815 -0.05509147 9.8937e-01 1.0899e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9982e-01 9.1647e-02 insignificant 1.0000e+00 1.00000000 insignificant -1.0364e-01 2.1564e-02 lowCoverage 0.5391063 lowCoverage 0.7013575 0.7771739 -8.3770e-02 7 0.7051731 0.8270815 -0.1219084 9.9883e-01 3.1330e-02 weaklyHypometh 1.0000e+00 2.1589e-01 insignificant 9.8553e-01 1.5863e-01 insignificant 1.0000e+00 9.6741e-01 insignificant -0.09294963 1.9075e-01 insignificant 1.0000e+00 insignificant chr10 1185150 1186150 34964 WDR37 ENSG00000047056 0.9164098 260 7 0.864416 206 7 0.9148526 188 7 0.947173 231 7 0.872550 104 7 0.844274 331 7 0.953501 121 5 0.882544 150 5 0.9333315 145 7 0.9630952 85 7 0.896259 290 7 0.7904453 62 6 0.9568254 119 7 0.884821 82 4 0.8949505 161 7 0.9677559 114 7 0.7916667 20 1 0.8925730 289 7 0.9156606 144 7 0.809528 296 7 0.910354 49 4 0.8887984 105 7 0.9724176 122 5 0.9281481 108 5 0.923918 79 5 0.9066418 215 7 0.879466 135 7 0.863229 97 7 0.8223894 123 5 0.9022105 228 7 0.9458518 188 7 0.9452350 332 7 0.8708377 172 7 0.6760989 44 3 0.8625578 328 5 0.908333 43 4 0.774656 187 7 0.8961450 168 5 0.9272989 250 7 0.9212715 210 7 0.9287004 218 7 0.9656465 184 7 0.9036890 221 7 0.9107444 0.8716905 0.8812040 0.9354674 0.9092033 0.953793 0.9382390 0.9103903 0.8895020 0.9368868 0.8897594 0.8458466 0.9237149 0.8786164 0.9119058 0.9210679 0.4981132 0.9023541 0.9393759 0.9132781 0.7910425 0.9011236 0.9724121 0.8952086 0.9145569 0.9451221 0.83899316 0.874837 0.8868655 0.8718782 0.9241973 0.9446509 0.8648518 0.6901451 0.90166390 0.92352201 0.748707 0.9002508 0.9140722 0.8992986 0.9204156 0.9704916 0.9214620 3 0.9108299 0.911286 6.2317e-04 7 0.862791 0.834260 0.02853173 7.0208e-01 4.5472e-01 insignificant 1.000000 1.000000 insignificant 0.93129320 0.30108213 insignificant 1.00000 1.00000 insignificant -0.01275663 0.4558500 insignificant 1.00000 insignificant 0.9113141 0.8312102 0.09055932 5 0.914619 0.8161667 0.0984521 2.0037e-06 8.3398e-01 weaklyHypermeth 1.8726e-05 1.0000e+00 weaklyHypermeth 2.0057e-02 7.7261e-01 weaklyHypermeth 1.4748e-01 1.0000e+00 insignificant 0.0631936 1.5034e-01 insignificant 9.4554e-01 insignificant 0.9108299 0.9270545 -0.01661025 7 0.862791 0.9376791 -0.07488767 9.5228e-01 2.5899e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.8339e-01 4.2259e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -3.4690e-02 4.2541e-02 weaklyHypometh 0.6634813 insignificant 0.912774 0.8312102 0.07912368 5 0.9177254 0.8161667 0.10155872 3.5203e-05 8.8915e-01 weaklyHypermeth 3.0347e-04 1.0000e+00 weaklyHypermeth 1.9627e-02 8.8174e-01 weaklyHypermeth 1.4647e-01 1.0000e+00 insignificant 0.0759502 9.4467e-02 insignificant 6.3400e-01 insignificant 0.911286 0.9270545 -0.01833803 7 0.8342597 0.9376791 -0.10341939 8.7427e-01 4.4112e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.2160e-01 7.7771e-01 insignificant 1.0000e+00 1.00000000 insignificant -2.1933e-02 1.7990e-01 insignificant 1.0000000 insignificant 0.8312102 0.9269871 -1.1276e-01 5 0.8161667 0.9287761 -0.1126095 9.2866e-01 7.2808e-03 weaklyHypometh 1.0000e+00 5.6006e-02 weaklyHypometh 7.3768e-01 6.0033e-02 insignificant 1.0000e+00 4.3820e-01 insignificant -0.09788322 4.3146e-02 weaklyHypometh 3.6257e-01 insignificant chr10 3077250 3078250 34970 ENSG00000218235 0.2517007 199 5 0.209993 202 6 0.3844638 172 7 0.272390 241 5 0.223097 121 7 0.407457 271 5 0.329113 156 6 0.167748 154 7 0.2659050 207 7 0.3099429 157 6 0.386685 216 7 0.3973612 114 7 0.0923697 198 7 0.213793 64 3 0.2433894 182 7 0.2763992 76 5 0.0299145 137 7 0.1308792 260 4 0.0280340 168 7 0.098171 259 5 0.429258 60 5 0.1094928 140 5 0.2591656 155 6 0.2462482 133 7 0.441680 80 5 0.1740666 229 7 0.195947 155 7 0.204484 84 6 0.2851557 120 7 0.2021479 286 7 0.1635400 222 7 0.4024168 228 4 0.0231236 219 7 0.0000000 147 7 0.0000000 127 6 0.000000 46 3 0.044792 169 7 0.0238095 182 7 0.1570757 306 7 0.0463660 204 7 0.0291887 219 5 0.0656291 194 3 0.2234020 249 5 0.3841123 0.2154367 0.3167695 0.2902071 0.1859268 0.314235 0.3431808 0.2044209 0.2391605 0.3474717 0.3796859 0.3620711 0.0632689 0.3487167 0.1977941 0.3124925 0.0162631 0.2081089 0.0450224 0.1058758 0.5489209 0.0610369 0.3687858 0.2026094 0.4252985 0.1851146 0.21139763 0.221828 0.3022988 0.1515798 0.1051211 0.4867491 0.0103331 0.0000000 0.00158730 0.00000000 0.027456 0.0025720 0.0720905 0.0503778 0.0581085 0.0484543 0.1058103 3 0.2307259 0.242072 -9.1144e-03 7 0.235678 0.245136 -0.00945817 7.4475e-01 3.0004e-01 insignificant 1.000000 1.000000 insignificant 0.87835723 0.29145953 insignificant 1.00000 1.00000 insignificant -0.02352661 0.5724753 insignificant 1.00000 insignificant 0.2307259 0.0101124 0.22300693 7 0.235678 0.0159791 0.2196989 1.3707e-14 1.0000e+00 hypermethylated 1.9865e-13 1.0000e+00 hypermethylated 4.8286e-12 1.0000e+00 hypermethylated 1.6095e-10 1.0000e+00 hypermethylated 0.2206528 5.3620e-08 hypermethylated 3.3512e-06 hypermethylated 0.2307259 0.0605802 0.15940686 5 0.235678 0.1074409 0.12823708 1.3703e-06 9.9999e-01 weaklyHypermeth 7.2119e-05 1.0000e+00 weaklyHypermeth 9.1258e-06 1.0000e+00 weaklyHypermeth 7.0198e-04 1.0000e+00 weaklyHypermeth 1.3161e-01 1.8555e-02 weaklyHypermeth 0.3865622 insignificant 0.242072 0.0101124 0.22875869 7 0.2451362 0.0159791 0.22915706 3.4978e-11 1.0000e+00 hypermethylated 4.7268e-10 1.0000e+00 hypermethylated 1.1559e-11 1.0000e+00 hypermethylated 5.7795e-10 1.0000e+00 hypermethylated 0.2441794 6.6337e-06 hypermethylated 2.1399e-04 hypermethylated 0.242072 0.0605802 0.16671505 5 0.2451362 0.1074409 0.13769525 9.6314e-05 9.9964e-01 weaklyHypermeth 3.3212e-03 1.0000e+00 weaklyHypermeth 5.3939e-06 1.0000e+00 weaklyHypermeth 5.7966e-04 1.00000000 weaklyHypermeth 1.5513e-01 9.7498e-03 weaklyHypermeth 0.3046828 insignificant 0.0101124 0.0605802 -5.7837e-02 5 0.0159791 0.1074409 -0.0914618 1.0000e+00 3.9952e-08 weaklyHypometh 1.0000e+00 7.1342e-07 weaklyHypometh 9.9999e-01 4.8112e-05 weaklyHypometh 1.0000e+00 1.0459e-03 weaklyHypometh -0.08904484 7.3135e-02 insignificant 5.2997e-01 insignificant chr10 3077950 3078950 34971 ENSG00000218235 0.2804233 225 7 0.314122 225 8 0.4286570 187 9 0.350626 272 7 0.259939 133 8 0.483578 301 7 0.402131 179 8 0.207393 170 8 0.3475557 220 8 0.3962001 160 6 0.447275 236 9 0.4868365 120 8 0.1829542 200 7 0.420307 68 3 0.2818954 191 8 0.2835160 79 5 0.0299145 137 7 0.1951283 290 6 0.1181005 189 9 0.181514 289 7 0.509444 70 6 0.1496377 143 5 0.3867584 165 7 0.2730079 149 9 0.518742 119 7 0.2318357 254 9 0.274625 170 9 0.178924 88 6 0.3328989 130 8 0.2737953 320 9 0.2206321 249 9 0.3963241 237 5 0.0684901 238 9 0.1111111 178 9 0.1250000 176 8 0.111111 49 3 0.059529 187 9 0.1103060 224 9 0.2417529 359 9 0.1201028 251 9 0.0941309 264 7 0.0713144 212 4 0.2818499 299 7 0.3831232 0.2429036 0.3307842 0.3077416 0.2023407 0.337389 0.3587280 0.2171993 0.2571216 0.3690694 0.3963367 0.3791502 0.0926445 0.3685810 0.2154469 0.3141676 0.0447050 0.2219626 0.0650605 0.1302526 0.5627952 0.0743411 0.3935880 0.2109180 0.4413704 0.1989728 0.22997892 0.235270 0.3204259 0.1728161 0.1257758 0.4881080 0.0245528 0.0323529 0.03386555 0.03235294 0.031393 0.0291773 0.0989637 0.0703600 0.0761723 0.0521263 0.1276611 3 0.2591062 0.274594 -8.9839e-03 9 0.303667 0.312265 -0.00859787 8.0625e-01 3.7168e-01 insignificant 1.000000 1.000000 insignificant 0.83277060 0.42186662 insignificant 1.00000 1.00000 insignificant -0.00731547 0.8711310 insignificant 1.00000 insignificant 0.2591062 0.0855513 0.20870796 9 0.303667 0.1048673 0.1987998 8.2416e-16 9.9989e-01 hypermethylated 1.3082e-14 1.0000e+00 hypermethylated 1.5877e-12 9.9999e-01 hypermethylated 5.8804e-11 1.0000e+00 hypermethylated 0.2073120 5.1693e-07 hypermethylated 2.2475e-05 hypermethylated 0.2591062 0.1162455 0.15775516 7 0.303667 0.1708411 0.13282596 5.4201e-07 1.0000e+00 weaklyHypermeth 3.3875e-05 1.0000e+00 weaklyHypermeth 6.3462e-06 1.0000e+00 weaklyHypermeth 5.2885e-04 1.0000e+00 weaklyHypermeth 1.4307e-01 2.2040e-02 weaklyHypermeth 0.4408040 insignificant 0.274594 0.0855513 0.21390898 9 0.3122649 0.1048673 0.20739765 8.2749e-12 9.9998e-01 hypermethylated 1.2538e-10 1.0000e+00 hypermethylated 1.1139e-11 1.0000e+00 hypermethylated 5.7795e-10 1.0000e+00 hypermethylated 0.2146275 5.0884e-05 hypermethylated 1.2411e-03 hypermethylated 0.274594 0.1162455 0.16495642 7 0.3122649 0.1708411 0.14142383 4.7103e-05 9.9997e-01 weaklyHypermeth 1.8117e-03 1.0000e+00 weaklyHypermeth 5.7966e-06 1.0000e+00 weaklyHypermeth 5.7966e-04 1.00000000 weaklyHypermeth 1.5039e-01 2.0669e-02 weaklyHypermeth 0.5391063 insignificant 0.0855513 0.1162455 -3.7852e-02 7 0.1048673 0.1708411 -0.0659738 9.9869e-01 1.5604e-08 weaklyHypometh 1.0000e+00 2.9442e-07 weaklyHypometh 9.9808e-01 3.7901e-05 weaklyHypometh 1.0000e+00 8.8141e-04 weaklyHypometh -0.06423893 2.0473e-01 insignificant 1.0000e+00 insignificant chr10 3139250 3140250 34980 PFKP ENSG00000067057 0.9369990 406 9 0.877169 255 9 0.9427257 245 9 0.958239 203 7 0.943386 96 9 0.935627 445 9 0.925351 210 9 0.935738 227 9 0.9562678 234 7 0.8563950 195 7 0.956907 247 9 0.9766506 128 7 0.9767773 195 7 1.000000 2 0 0.8347486 225 7 0.9619048 100 7 0.8766496 119 9 0.7904660 179 9 0.9438056 204 9 0.955308 342 9 0.888889 131 7 0.7780388 78 5 0.9603439 256 7 0.8585648 120 9 0.942424 103 9 0.8691982 311 9 0.950742 119 7 0.922073 119 7 0.9261733 179 9 0.9675092 356 9 0.9392622 269 9 0.9269101 401 9 0.8746900 280 9 0.9365418 224 9 0.9307153 77 5 0.902229 163 9 0.683819 139 9 0.9217362 378 9 0.9452984 419 9 0.6503913 362 9 0.9359264 241 9 0.9213302 290 9 0.7056661 255 9 0.9375026 0.8655679 0.9152605 0.9699093 0.9522227 0.921471 0.9385716 0.9002672 0.9401785 0.9473697 0.9287594 0.9686964 0.9559429 NA 0.9537941 0.9687939 0.8547187 0.7893534 0.9795202 0.9467740 0.8937563 0.8136835 0.9492597 0.9329809 0.9340383 0.9575906 0.92687329 0.897749 0.9017452 0.9797628 0.9189485 0.9492276 0.8359257 0.9506549 0.91708885 0.89583696 0.916398 0.8933927 0.9389948 0.7741763 0.9589929 0.9358472 0.7088841 7 0.9292929 0.933989 -4.3930e-03 9 0.925526 0.921338 0.00418776 6.6064e-01 5.0398e-01 insignificant 1.000000 1.000000 insignificant 0.78704030 0.40117019 insignificant 1.00000 1.00000 insignificant 0.01621172 0.4169080 insignificant 1.00000 insignificant 0.9292929 0.8833333 0.04328622 9 0.925526 0.8898459 0.0356802 1.8990e-04 9.8146e-01 weaklyHypermeth 1.4836e-03 1.0000e+00 weaklyHypermeth 2.0502e-02 9.7146e-01 weaklyHypermeth 1.4965e-01 1.0000e+00 insignificant 0.0521006 2.5194e-01 insignificant 1.0000e+00 insignificant 0.9292929 0.8564135 0.07564209 9 0.925526 0.8059635 0.11956259 4.7323e-08 1.0000e+00 weaklyHypermeth 3.1549e-06 1.0000e+00 weaklyHypermeth 1.0436e-04 9.9999e-01 weaklyHypermeth 5.4925e-03 1.0000e+00 weaklyHypermeth 9.5333e-02 2.0925e-01 insignificant 1.0000000 insignificant 0.933661 0.8826328 0.04392712 9 0.9001157 0.8156921 0.08442366 4.2055e-03 9.5070e-01 weaklyHypermeth 2.9616e-02 1.0000e+00 weaklyHypermeth 1.8050e-02 9.3007e-01 weaklyHypermeth 1.3674e-01 1.0000e+00 insignificant 0.0358889 4.2585e-01 insignificant 1.0000e+00 insignificant 0.933989 0.8564135 0.07896053 9 0.9213384 0.8059635 0.11537483 5.9737e-06 9.9999e-01 weaklyHypermeth 3.7335e-04 1.0000e+00 weaklyHypermeth 4.4487e-04 9.9986e-01 weaklyHypermeth 2.0221e-02 1.00000000 weaklyHypermeth 7.9122e-02 2.8588e-01 insignificant 1.0000000 insignificant 0.8833333 0.8564135 3.2587e-02 9 0.8898459 0.8059635 0.0838823 5.0226e-02 9.7346e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.5726e-01 9.8304e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.04323271 5.8106e-01 insignificant 1.0000e+00 insignificant chr10 3355050 3356050 34985 PITRM1 ENSG00000107959 0.9407630 136 5 0.977094 120 5 0.8808566 96 5 1.000000 18 0 0.912500 75 5 0.901435 190 5 0.916667 66 2 0.964286 63 3 0.9498911 105 5 0.8991973 92 5 0.882252 171 5 0.8866667 71 2 0.9366667 156 5 NA 0 0 0.9443223 59 2 0.8857143 33 2 0.8636078 59 5 0.9777778 62 5 0.9104762 90 5 0.890525 143 5 0.804762 39 5 0.9714286 19 2 0.9663594 102 5 0.8211111 50 5 0.933333 25 3 0.9374327 132 5 0.819343 58 5 0.904762 67 5 0.8659420 51 2 0.9519716 145 5 0.9623985 115 5 0.9571367 222 5 0.9844273 118 5 0.9857143 71 5 0.8587993 179 5 0.960000 19 1 0.889167 61 5 0.9494737 140 5 0.9925926 138 5 0.9650122 178 5 1.0000000 82 5 0.9448571 130 5 0.9369412 107 5 0.9256636 0.9680762 0.8741489 1.0000000 0.8771930 0.900633 0.9203216 0.9498747 0.9303214 0.8771064 0.8756793 0.8423977 0.9330409 NA 0.9222736 0.8395990 0.8340282 0.9688109 0.8747703 0.8643700 0.7504177 0.9611529 0.9603040 0.7759259 0.9415205 0.9336566 0.84006734 0.869256 0.8878719 0.9481453 0.9581509 0.9528296 0.9786177 0.9799499 0.90455298 0.94385965 0.890534 0.9502206 0.9951267 0.9552402 1.0000000 0.9555890 0.9209494 2 0.8914127 0.929756 -3.7777e-02 5 0.911555 0.934722 -0.02316680 3.6857e-01 1.6469e-02 weaklyHypometh 1.000000 0.567899 insignificant 0.07409731 0.12732992 insignificant 1.00000 1.00000 insignificant 0.01414362 0.4966750 lowCoverage 1.00000 lowCoverage 0.8914127 0.9013605 -0.00905691 5 0.911555 0.8952338 0.0163210 8.2282e-04 4.9568e-02 weaklyHypometh 5.9195e-03 1.0000e+00 weaklyHypometh 7.6463e-01 6.1582e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0157882 5.1793e-01 lowCoverage 1.0000e+00 lowCoverage 0.8914127 0.9653543 -0.07306335 5 0.911555 0.9661065 -0.05455166 9.9331e-01 6.8290e-03 weaklyHypometh 1.0000e+00 1.7971e-01 insignificant 8.4111e-01 4.0765e-02 weaklyHypometh 1.0000e+00 8.1529e-01 insignificant -4.5739e-02 1.6402e-02 lowCoverage 0.3565573 lowCoverage 0.929756 0.9013605 0.02023988 5 0.9347216 0.8952338 0.03948785 3.1150e-02 4.2585e-01 weaklyHypermeth 1.8765e-01 1.0000e+00 insignificant 9.0502e-01 1.3263e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0299318 3.0803e-01 lowCoverage 1.0000e+00 lowCoverage 0.929756 0.9653543 -0.03438131 5 0.9347216 0.9661065 -0.03138486 9.7671e-01 1.6050e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7131e-01 9.5154e-02 insignificant 1.0000e+00 1.00000000 insignificant -5.9882e-02 1.6529e-02 lowCoverage 0.4674966 lowCoverage 0.9013605 0.9653543 -6.4038e-02 5 0.8952338 0.9661065 -0.0708727 9.4586e-01 3.7798e-02 weaklyHypometh 1.0000e+00 2.5198e-01 insignificant 7.4527e-01 6.6199e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02995042 2.6177e-01 lowCoverage 1.0000e+00 lowCoverage chr10 3700150 3701150 34996 PITRM1 ENSG00000107959 0.4023134 312 7 0.382504 259 8 0.2980554 227 8 0.327703 225 5 0.310816 184 8 0.429856 524 7 0.322220 373 8 0.401745 224 8 0.3539123 187 8 0.2930032 157 8 0.431357 328 8 0.3983780 197 8 0.3977955 178 8 0.208333 33 2 0.3865462 242 8 0.3291073 147 8 0.3833639 184 6 0.2957261 325 6 0.4016869 339 8 0.329840 489 8 0.410166 78 5 0.1031746 34 4 0.2885705 259 8 0.4464695 110 8 0.177778 36 4 0.3916932 383 8 0.210447 130 7 0.368519 44 6 0.4267439 283 8 0.3816076 391 8 0.4634907 419 8 0.4703102 374 8 0.5582507 226 8 0.5302792 352 8 0.4285714 231 7 0.758333 27 3 0.588124 159 8 0.7088041 417 8 0.4578151 441 7 0.3782306 431 8 0.2847846 211 5 0.3823687 442 6 0.3431664 294 6 0.2400439 0.2162410 0.1945145 0.1626274 0.1467550 0.287896 0.1917028 0.2398042 0.2031289 0.1742221 0.2884860 0.2851570 0.2624009 0.2175332 0.2702130 0.1776533 0.1901475 0.2763329 0.2366840 0.1976805 0.2994248 0.0826211 0.1590084 0.3402952 0.1117949 0.2714943 0.17451087 0.259658 0.2391548 0.2182934 0.3369908 0.3403419 0.5460960 0.5423031 0.44382284 0.60470584 0.626038 0.7248284 0.3655833 0.3193948 0.1134025 0.2251051 0.3213520 5 0.2756136 0.304998 -4.0821e-02 8 0.329593 0.380907 -0.05131352 9.8852e-01 1.1100e-02 weaklyHypometh 1.000000 0.554987 insignificant 0.72907897 0.54105980 insignificant 1.00000 1.00000 insignificant 0.00929908 0.8070074 insignificant 1.00000 insignificant 0.2756136 0.5701133 -0.28951470 8 0.329593 0.5446118 -0.2150187 7.3478e-01 7.7066e-20 hypomethylated 1.0000e+00 3.8533e-17 hypomethylated 9.9881e-01 1.2524e-05 hypomethylated 1.0000e+00 3.1309e-03 hypomethylated -0.2411806 3.6997e-03 weaklyHypometh 4.4044e-02 weaklyHypometh 0.2757210 0.2270478 -0.00430542 6 0.370792 0.3891072 -0.01831496 7.3808e-02 1.3051e-03 weaklyHypometh 9.2260e-01 5.9322e-02 weaklyHypometh 3.1234e-01 3.3095e-02 weaklyHypometh 1.0000e+00 7.0945e-01 insignificant -1.5060e-02 6.4447e-01 insignificant 1.0000000 insignificant 0.304998 0.5701133 -0.26307310 8 0.3809066 0.5446118 -0.16370516 8.4982e-01 1.0114e-10 hypomethylated 1.0000e+00 3.3714e-08 hypomethylated 9.9528e-01 3.9489e-05 hypomethylated 1.0000e+00 9.8723e-03 hypomethylated -0.2504797 1.9460e-03 weaklyHypometh 2.7408e-02 weaklyHypometh 0.305205 0.2270478 0.02429998 6 0.4035199 0.3891072 0.01441275 1.9365e-02 9.2674e-02 weaklyHypermeth 2.8066e-01 1.0000e+00 insignificant 7.7925e-01 1.2822e-01 insignificant 1.0000e+00 1.00000000 insignificant -2.4359e-02 5.9720e-01 insignificant 1.0000000 insignificant 0.5705174 0.2270478 3.1499e-01 6 0.6126882 0.3891072 0.2235810 3.2919e-05 9.3001e-01 hypermethylated 8.2298e-03 1.0000e+00 hypermethylated 2.3999e-03 9.0245e-01 weaklyHypermeth 3.9998e-01 1.0000e+00 insignificant 0.22612071 4.3032e-03 weaklyHypermeth 7.8240e-02 weaklyHypermeth chr10 3771750 3772750 34998 PITRM1 ENSG00000107959 0.7669582 286 6 0.618461 129 6 0.7317194 115 6 0.798783 151 6 0.756292 215 6 0.726706 322 6 0.815951 192 6 0.763754 213 6 0.7419600 178 6 0.9082741 164 6 0.795323 323 6 0.8096710 140 6 0.8966547 238 6 1.000000 7 1 0.7451602 201 6 0.8017029 124 6 0.8000612 135 6 0.6994656 133 6 0.8913214 234 6 0.642995 310 6 0.557852 98 5 0.6315592 162 6 0.7147617 136 6 0.6493503 225 6 0.503335 129 6 0.7673973 181 6 0.729770 271 6 0.785147 121 6 0.7342325 250 6 0.6617941 198 6 0.6406796 147 6 0.6058709 482 6 0.6104142 107 6 0.8267161 157 6 0.6667203 80 5 0.824839 107 6 0.749567 178 6 0.7964497 180 6 0.7661696 457 6 0.7632671 344 6 0.7355100 208 6 0.8450730 165 6 0.7998894 251 6 0.7955158 0.7342148 0.7788577 0.7947986 0.9104133 0.761235 0.7951021 0.8932940 0.8398958 0.9165549 0.8930751 0.8416462 0.8973360 NA 0.8947872 0.8384564 0.9041641 0.8110384 0.9003959 0.7828758 0.6095981 0.6681809 0.8686488 0.7357128 0.6393077 0.8073878 0.77096570 0.779215 0.8762364 0.8049644 0.7787079 0.7690633 0.6721393 0.8619946 0.71310513 0.85057073 0.744271 0.7833530 0.8029442 0.8006269 0.7740545 0.8693003 0.8393603 6 0.8304462 0.746038 8.6312e-02 6 0.739686 0.608229 0.13145722 1.3018e-05 9.9400e-01 weaklyHypermeth 0.013018 1.000000 weaklyHypermeth 0.00011353 0.99792057 weaklyHypermeth 0.11353 1.00000 insignificant 0.12041486 0.0008666 weaklyHypermeth 0.28887 insignificant 0.8304462 0.7787392 0.06072835 6 0.739686 0.7540589 -0.0143732 7.7309e-03 8.9475e-01 weaklyHypermeth 4.8622e-02 1.0000e+00 weaklyHypermeth 3.6700e-02 9.2237e-01 weaklyHypermeth 2.4966e-01 1.0000e+00 insignificant 0.0397763 3.6688e-01 insignificant 1.0000e+00 insignificant 0.8329810 0.7824561 0.03799019 6 0.821565 0.7764795 0.04508560 8.0927e-02 9.8258e-01 insignificant 9.5208e-01 1.0000e+00 insignificant 8.2735e-02 9.8418e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.5789e-03 8.9839e-01 insignificant 1.0000000 insignificant 0.746038 0.7787392 -0.01346775 6 0.6082285 0.7540589 -0.14583037 3.4534e-01 1.3121e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.2285e-01 2.5425e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0806385 9.7688e-02 insignificant 6.4085e-01 insignificant 0.748325 0.7824561 -0.05085547 6 0.7316063 0.7764795 -0.04487324 8.5666e-01 1.4199e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.5695e-01 5.2402e-02 insignificant 1.0000e+00 1.00000000 insignificant -1.1684e-01 1.9743e-03 weaklyHypometh 0.1410237 insignificant 0.7788820 0.7824561 -2.5704e-02 6 0.7554118 0.7764795 -0.0210677 9.5218e-01 1.2770e-01 insignificant 1.0000e+00 6.9603e-01 insignificant 9.4032e-01 2.0593e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03619742 4.0576e-01 insignificant 1.0000e+00 insignificant chr10 5694850 5695850 35103 CALML3 ENSG00000178363 0.8710296 285 5 0.6552004 258 5 0.7461779 172 5 0.71828924 251 5 0.8449477 119 5 0.856918 273 5 0.7015596 171 5 0.7571882 170 5 0.7563543 159 5 0.782637 125 5 0.704101 259 5 0.5756191 96 5 0.7258892 115 5 0.8365646 85 5 0.8669839 190 5 0.8588384 71 5 0.9531697 341 2 0.8188143 531 5 0.7812145 202 5 0.8313911 242 5 0.839403 83 5 0.745646 113 5 0.8690717 146 5 0.627972 139 5 0.8583956 141 5 0.6032402 236 5 0.478207 189 5 0.7100000 75 5 0.846425 165 5 0.6495259 245 5 0.6349707 246 5 0.7420968 282 5 0.491199 259 5 0.482534 251 5 0.700796 195 3 0.833333 39 5 0.555536 186 6 0.6283621 321 5 0.8397295 267 5 0.661723 238 5 0.6203589 254 5 0.63225736 277 5 0.5640532 213 5 0.827770 0.788919 0.762387 0.8031927 0.8674478 0.8099580 0.849575 0.8663891 0.7567954 0.862813 0.865726 0.8211233 0.8220753 0.853736 0.8038576 0.8669422 0.9160893 0.778064 0.899439 0.8075571 0.832316 0.73477147 0.848641 0.7801981 0.8470615 0.8408179 0.7748231 0.6988129 0.814977 0.8487710 0.8283345 0.853877 0.5903140 0.4943894 0.6301865 0.8528015 0.701369 0.5988335 0.8456197 0.7949734 0.7490978 0.7629020 0.788162 5 0.830134 0.812136 0.01369190 5 0.681850 0.5407620 0.14108838 0.5242054 8.7669e-01 insignificant 1 1.0000000 insignificant 0.4596032 0.992475 insignificant 1 1 insignificant 0.06506487 0.125921 lowCoverage 1 lowCoverage 0.830294 0.5979217 2.2589e-01 5 0.722262 0.537720 0.1845419 2.2504e-10 9.9408e-01 hypermethylated 6.4298e-09 1.0000e+00 hypermethylated 3.6096e-02 9.2627e-01 weaklyHypermeth 4.1972e-01 1.00000000 insignificant 0.1668509 2.7767e-02 lowCoverage 4.7874e-01 lowCoverage 0.8300924 0.800641 0.03769691 5 0.6500354 0.545270 0.1047652 8.7173e-02 9.8189e-01 insignificant 1.0000e+00 1.0000000 insignificant 1.0844e-01 9.9715e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.11852001 0.06208978 lowCoverage 1.00000 lowCoverage 0.813320 0.5979217 0.21114132 5 0.6609314 0.537720 0.1232117 1.5593e-06 8.5326e-01 hypermethylated 2.9986e-05 1.0000e+00 hypermethylated 1.3619e-01 8.3406e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.1017861 1.5449e-01 lowCoverage 1.0000e+00 lowCoverage 0.812530 0.800641 0.02593858 5 0.5948382 0.545270 0.0495680 2.0058e-01 9.3923e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.8736e-01 9.9258e-01 insignificant 1.000000 1.0000e+00 insignificant 0.0534551 0.38648041 insignificant 1.00000 insignificant 0.5979217 0.801925 -0.1945164 5 0.5377197 0.605856 -0.06813613 0.9722888 2.0127e-02 weaklyHypometh 1.00000 2.2614e-01 insignificant 0.92756700 6.2928e-01 insignificant 1.00000 1.0000e+00 insignificant -0.0483309 5.2127e-01 lowCoverage 1.00000000 lowCoverage chr10 5695150 5696150 35104 CALML3 ENSG00000178363 0.8710296 285 5 0.6552004 258 5 0.7461779 172 5 0.71828924 251 5 0.8449477 119 5 0.856918 273 5 0.7015596 171 5 0.7571882 170 5 0.7563543 159 5 0.782637 125 5 0.704101 259 5 0.5756191 96 5 0.7258892 115 5 0.8365646 85 5 0.8669839 190 5 0.8588384 71 5 0.9531697 341 2 0.8188143 531 5 0.7812145 202 5 0.8313911 242 5 0.839403 83 5 0.745646 113 5 0.8690717 146 5 0.627972 139 5 0.8583956 141 5 0.6032402 236 5 0.478207 189 5 0.7100000 75 5 0.846425 165 5 0.6495259 245 5 0.6349707 246 5 0.7420968 282 5 0.491199 259 5 0.482534 251 5 0.700796 195 3 0.833333 39 5 0.555536 186 6 0.6283621 321 5 0.8397295 267 5 0.661723 238 5 0.6203589 254 5 0.63225736 277 5 0.5640532 213 5 0.827770 0.788919 0.762387 0.8031927 0.8674478 0.8099580 0.849575 0.8663891 0.7567954 0.862813 0.865726 0.8211233 0.8220753 0.853736 0.8038576 0.8669422 0.9160893 0.778064 0.899439 0.8075571 0.832316 0.73477147 0.848641 0.7801981 0.8470615 0.8408179 0.7748231 0.6988129 0.814977 0.8487710 0.8283345 0.853877 0.5903140 0.4943894 0.6301865 0.8528015 0.701369 0.5988335 0.8456197 0.7949734 0.7490978 0.7629020 0.788162 5 0.830134 0.812136 0.01369190 5 0.681850 0.5407620 0.14108838 0.5242054 8.7669e-01 insignificant 1 1.0000000 insignificant 0.4596032 0.992475 insignificant 1 1 insignificant 0.06506487 0.125921 lowCoverage 1 lowCoverage 0.830294 0.5979217 2.2589e-01 5 0.722262 0.537720 0.1845419 2.2504e-10 9.9408e-01 hypermethylated 6.4298e-09 1.0000e+00 hypermethylated 3.6096e-02 9.2627e-01 weaklyHypermeth 4.1972e-01 1.00000000 insignificant 0.1668509 2.7767e-02 lowCoverage 4.7874e-01 lowCoverage 0.8300924 0.800641 0.03769691 5 0.6500354 0.545270 0.1047652 8.7173e-02 9.8189e-01 insignificant 1.0000e+00 1.0000000 insignificant 1.0844e-01 9.9715e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.11852001 0.06208978 lowCoverage 1.00000 lowCoverage 0.813320 0.5979217 0.21114132 5 0.6609314 0.537720 0.1232117 1.5593e-06 8.5326e-01 hypermethylated 2.9986e-05 1.0000e+00 hypermethylated 1.3619e-01 8.3406e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.1017861 1.5449e-01 lowCoverage 1.0000e+00 lowCoverage 0.812530 0.800641 0.02593858 5 0.5948382 0.545270 0.0495680 2.0058e-01 9.3923e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.8736e-01 9.9258e-01 insignificant 1.000000 1.0000e+00 insignificant 0.0534551 0.38648041 insignificant 1.00000 insignificant 0.5979217 0.801925 -0.1945164 5 0.5377197 0.605856 -0.06813613 0.9722888 2.0127e-02 weaklyHypometh 1.00000 2.2614e-01 insignificant 0.92756700 6.2928e-01 insignificant 1.00000 1.0000e+00 insignificant -0.0483309 5.2127e-01 lowCoverage 1.00000000 lowCoverage chr10 6041550 6042550 35117 FBXO18 ENSG00000134452 0.9365828 331 6 0.8960548 185 7 0.8570623 115 6 0.90964880 216 6 0.9104555 96 7 0.903459 236 6 0.8224225 130 7 0.9553386 144 6 0.8390018 91 6 0.953385 88 4 0.876118 195 7 0.9038095 49 3 0.9455437 126 6 0.9687500 42 2 0.9434716 93 6 0.7887755 53 3 0.5000000 9 1 0.9200316 595 6 0.9184419 183 6 0.9462528 288 6 0.876165 107 6 0.893425 129 4 0.9047476 216 7 0.834454 81 6 0.8718879 332 7 0.8874000 212 7 0.657257 114 6 0.7482993 39 3 0.918587 182 6 0.9136113 212 7 0.9505477 206 7 0.9554983 284 7 0.824405 128 7 0.796483 165 6 0.839286 115 6 0.829167 33 3 0.915539 83 6 0.8539974 231 7 0.7810878 166 6 0.910032 177 6 0.9318093 201 6 0.84764953 197 6 0.8730393 189 6 0.923426 0.913322 0.844083 0.9067409 0.9206257 0.8848692 0.853609 0.8955351 0.8843045 0.934604 0.885667 0.8421855 0.9043707 0.934756 0.9034881 0.8534146 0.7900882 0.886535 0.907510 0.9204885 0.863237 0.82511390 0.857357 0.9513917 0.8513819 0.9276973 0.8587107 0.7918699 0.927428 0.8816522 0.9188929 0.926700 0.7900591 0.9471406 0.9917733 0.8577270 0.944853 0.7869435 0.8081789 0.9025273 0.8882011 0.8368546 0.785801 3 0.896996 0.891521 0.00703615 6 0.906700 0.9012996 0.00540058 0.3427630 6.9492e-01 insignificant 1 1.0000000 insignificant 0.2124137 0.873267 insignificant 1 1 insignificant 0.01707362 0.617318 insignificant 1 insignificant 0.896996 0.8803191 1.6272e-02 6 0.906700 0.884744 0.0219558 1.5606e-01 3.8714e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.3539e-01 5.8606e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0415841 1.5422e-01 insignificant 1.0000e+00 insignificant 0.8969957 0.848060 0.04799460 6 0.9067001 0.854752 0.0519478 9.2617e-04 9.7383e-01 weaklyHypermeth 4.0567e-02 1.0000000 weaklyHypermeth 1.0061e-02 9.9175e-01 weaklyHypermeth 0.4192074 1.0000e+00 insignificant 0.01600678 0.65499769 insignificant 1.00000 insignificant 0.890728 0.8793103 0.00891486 6 0.8303038 0.836651 -0.0063475 2.7945e-01 3.7420e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.7300e-01 5.4917e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0245105 4.2257e-01 insignificant 1.0000e+00 insignificant 0.890728 0.848224 0.03949654 6 0.8303038 0.872908 -0.0426045 6.4799e-02 9.6702e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.5198e-01 9.6912e-01 insignificant 1.000000 1.0000e+00 insignificant -0.0010668 0.97699370 insignificant 1.00000 insignificant 0.8794702 0.848387 0.0300491 6 0.8548011 0.887030 -0.03222846 0.1457930 7.8478e-01 insignificant 1.00000 1.0000e+00 insignificant 0.34663412 8.0291e-01 insignificant 1.00000 1.0000e+00 insignificant -0.0255773 4.3703e-01 insignificant 1.00000000 insignificant chr10 6148350 6149350 35124 IL2RA ENSG00000134460 0.8997724 96 5 0.8717077 135 5 0.6722222 48 5 0.93687343 111 5 0.8571429 33 5 0.840893 226 5 0.6944444 29 1 0.8093954 84 5 0.4666667 30 5 0.949206 31 5 0.919479 206 5 0.8750000 17 0 0.9247059 95 5 0.9454545 51 5 0.9466667 98 5 0.0000000 1 0 1.0000000 3 0 0.7252295 199 5 0.7705128 120 5 0.7995822 193 5 0.822391 54 5 0.836364 66 5 0.9308195 91 5 0.895833 24 1 0.8500000 46 5 0.8780889 209 5 0.886548 70 5 0.3968254 41 5 0.794001 89 5 0.8701280 166 5 0.9581582 146 5 0.7456949 193 5 0.706667 75 5 0.740000 26 1 0.892308 160 5 0.900000 7 0 0.818337 112 5 0.8432184 162 5 0.8862626 71 5 0.947179 82 5 0.9005495 80 5 0.98333333 32 5 0.9306667 84 5 0.876951 0.861944 0.667989 0.9369033 0.8639456 0.8451625 0.623016 0.8125195 0.5714286 0.946334 0.901332 0.8571429 0.9187675 0.948052 0.9412698 NA 0.9509710 0.874130 0.924542 0.8039499 0.886965 0.83766234 0.915334 0.8750000 0.8492063 0.8748852 0.8871882 0.4136432 0.885413 0.8660164 0.9537156 0.890723 0.7079365 0.7380952 0.8815629 0.9047619 0.789740 0.8379858 0.8916787 0.9481074 0.9035845 0.9801587 0.930159 0 0.861573 0.869456 -0.00952844 5 0.823017 0.8117362 0.01128040 0.5809554 5.0176e-01 insignificant 1 1.0000000 insignificant 0.4545048 0.771262 insignificant 1 1 insignificant -0.02682318 0.685704 lowCoverage 1 lowCoverage 0.861573 0.8284133 3.4169e-02 5 0.823017 0.856047 -0.0330307 2.7861e-01 8.5058e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.8690e-01 8.3277e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0215073 7.2258e-01 lowCoverage 1.0000e+00 lowCoverage 0.8626251 0.931232 -0.06677419 5 0.8626200 0.924376 -0.0617562 9.9591e-01 4.5507e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant 9.9539e-01 6.8518e-02 insignificant 1.0000000 1.0000e+00 insignificant -0.13435055 0.01921119 lowCoverage 0.71153 lowCoverage 0.869456 0.8284133 0.04577592 5 0.8117362 0.856047 -0.0443111 5.7921e-02 7.5333e-01 insignificant 5.1715e-01 1.0000e+00 insignificant 2.6777e-01 7.8004e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0053159 9.2148e-01 lowCoverage 1.0000e+00 lowCoverage 0.871946 0.931232 -0.06356187 5 0.8740835 0.924376 -0.0502926 9.7227e-01 4.6512e-04 weaklyHypometh 1.0000e+00 1.1628e-01 insignificant 9.8977e-01 1.5487e-03 weaklyHypometh 1.000000 4.9332e-01 insignificant -0.1075274 0.03311381 lowCoverage 1.00000 lowCoverage 0.8280961 0.931232 -0.1051623 5 0.8272568 0.924376 -0.09711930 0.9977133 1.4818e-03 weaklyHypometh 1.00000 2.3153e-02 weaklyHypometh 0.99934003 2.0067e-02 weaklyHypometh 1.00000 2.9965e-01 insignificant -0.1128433 1.6366e-02 lowCoverage 0.34095623 lowCoverage chr10 6644050 6645050 35139 PRKCQ ENSG00000065675 0.9193757 381 7 0.7265002 722 7 0.9003115 289 7 0.94154366 306 7 0.6767488 159 7 0.775753 474 7 0.8863954 251 7 0.7137144 311 7 0.7382977 258 7 0.789536 266 7 0.916040 427 7 0.7169085 136 6 0.9454329 294 6 0.8089449 201 7 0.9149830 405 7 0.8253968 77 6 0.3147470 366 2 0.8167625 376 7 0.9320428 440 7 0.8422634 353 7 0.703395 109 7 0.773148 148 6 0.9282569 248 7 0.619652 232 7 0.7217444 110 6 0.8221028 617 7 0.662782 268 7 0.6803678 141 8 0.883308 389 7 0.8242374 680 7 0.9265310 637 7 0.8304619 440 7 0.650441 392 7 0.667270 222 6 0.617770 275 5 0.544643 33 2 0.530424 356 9 0.7433396 569 7 0.8217144 507 7 0.783061 345 7 0.9209862 282 6 0.88287501 296 6 0.9119076 296 7 0.914410 0.838112 0.915931 0.9341033 0.8737489 0.8890086 0.884580 0.9273738 0.8521279 0.935229 0.914536 0.9134357 0.9384016 0.911544 0.9361331 0.9336640 0.6266932 0.930180 0.920149 0.9337673 0.918067 0.99418403 0.927189 0.9080215 0.9087597 0.9389475 0.8612966 0.9121813 0.891860 0.9363765 0.9286945 0.945908 0.6901034 0.7053887 0.6652117 0.7528274 0.681749 0.7559494 0.9291385 0.9055205 0.9163699 0.9080069 0.928393 6 0.862138 0.919134 -0.05952907 7 0.586690 0.6103830 -0.02369318 0.8967019 1.9326e-01 insignificant 1 1.0000000 insignificant 0.8717824 0.428408 insignificant 1 1 insignificant 0.02375256 0.593803 insignificant 1 insignificant 0.862271 0.6859773 1.5742e-01 7 0.645359 0.554306 0.0910525 8.4050e-16 9.9823e-01 weaklyHypermeth 3.2327e-14 1.0000e+00 weaklyHypermeth 1.1392e-06 9.9952e-01 weaklyHypermeth 4.9529e-05 1.00000000 weaklyHypermeth 0.1794370 1.2867e-03 weaklyHypermeth 3.7845e-02 weaklyHypermeth 0.8634259 0.918888 -0.05604064 7 0.7816985 0.801823 -0.0201241 8.9032e-01 3.3037e-01 insignificant 1.0000e+00 1.0000000 insignificant 5.6646e-01 8.4227e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.05902392 0.17656607 insignificant 1.00000 insignificant 0.919592 0.6859773 0.22953222 7 0.6714213 0.554306 0.1171150 7.6173e-15 1.6240e-01 hypermethylated 3.3119e-13 1.0000e+00 hypermethylated 7.0808e-06 9.2285e-01 hypermethylated 3.5404e-04 1.00000000 hypermethylated 0.1556844 3.8778e-03 weaklyHypermeth 1.0481e-01 insignificant 0.921637 0.918888 0.00768883 7 0.8080266 0.801823 0.0062040 4.7219e-01 9.1002e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.0399e-01 9.8416e-01 insignificant 1.000000 1.0000e+00 insignificant -0.0827765 0.05998505 insignificant 1.00000 insignificant 0.6865834 0.918888 -0.2165562 7 0.6178829 0.801823 -0.18393970 0.9754285 3.6135e-07 hypomethylated 1.00000 1.5056e-05 hypomethylated 0.99987399 8.7608e-05 hypomethylated 1.00000 4.8671e-03 hypomethylated -0.2384609 3.1832e-04 hypomethylated 0.02824656 hypomethylated chr10 6803350 6804350 35140 PRKCQ ENSG00000065675 0.7970760 124 5 0.5369911 251 5 0.4126923 148 5 0.66088537 150 5 0.4372906 96 5 0.640185 283 5 0.5024959 117 5 0.6425857 250 5 0.5437497 151 5 0.500826 88 5 0.723665 157 5 0.5173187 91 5 0.5522437 170 5 0.5779669 108 5 0.5207231 170 5 0.8760000 99 5 0.6000000 16 0 0.4302839 272 5 0.8561459 200 5 0.6545464 189 5 0.710216 47 5 0.370000 84 5 0.7227480 145 5 0.356349 124 5 0.5800000 26 4 0.5413849 278 5 0.460286 72 5 0.1663333 105 5 0.529525 147 5 0.6677489 333 5 0.7133696 184 5 0.5738808 287 5 0.000000 205 5 0.000000 32 3 0.000000 276 5 0.000000 12 0 0.000000 282 5 0.0000000 241 5 0.7389506 121 5 0.575611 168 5 0.5659946 196 3 0.30833333 156 5 0.4079996 246 5 0.819770 0.568338 0.450412 0.7611515 0.5353558 0.6711336 0.512150 0.6985738 0.5805641 0.613522 0.766513 0.5543817 0.5970737 0.636322 0.5891724 0.9107042 0.5586854 0.452387 0.845019 0.6788051 0.745940 0.42183099 0.766871 0.4141910 0.6164319 0.6100617 0.4887004 0.1883177 0.643082 0.6867420 0.7336421 0.585946 0.0000000 0.0000000 0.0000000 0.0000000 0.000000 0.0000000 0.7857768 0.6539502 0.6293415 0.3919908 0.470864 3 0.653355 0.600983 0.03641085 5 0.599378 0.5575191 0.04185841 0.1732612 9.8065e-01 insignificant 1 1.0000000 insignificant 0.1220664 0.988321 insignificant 1 1 insignificant 0.06653011 0.261953 lowCoverage 1 lowCoverage 0.653355 0.0000000 6.5335e-01 5 0.599378 0.000000 0.5993776 5.0827e-38 1.0000e+00 hypermethylated 7.2610e-36 1.0000e+00 hypermethylated 1.4275e-14 1.0000e+00 hypermethylated 4.7584e-12 1.00000000 hypermethylated 0.5991835 2.9925e-14 lowCoverage 7.0474e-12 lowCoverage 0.6533546 0.635851 0.04312840 5 0.5993776 0.498662 0.1007159 8.9564e-03 9.5441e-01 weaklyHypermeth 2.5590e-01 1.0000000 insignificant 9.2803e-02 8.6733e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.07980568 0.36187938 lowCoverage 1.00000 lowCoverage 0.600983 0.0000000 0.60098253 5 0.5575191 0.000000 0.5575191 1.1023e-26 1.0000e+00 hypermethylated 1.2248e-24 1.0000e+00 hypermethylated 3.1005e-12 1.0000e+00 hypermethylated 1.0335e-09 1.00000000 hypermethylated 0.5326534 3.3281e-07 lowCoverage 4.7544e-05 lowCoverage 0.600983 0.635851 0.01200433 5 0.5575191 0.498662 0.0588575 1.1659e-01 8.2260e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.6500e-01 5.8368e-01 insignificant 1.000000 1.0000e+00 insignificant 0.0132756 0.88541678 lowCoverage 1.00000 lowCoverage 0.0000000 0.635851 -0.6272763 5 0.0000000 0.498662 -0.49866164 1.0000000 7.8967e-19 hypomethylated 1.00000 1.1281e-16 hypomethylated 1.00000000 1.2986e-08 hypomethylated 1.00000 4.3287e-06 hypomethylated -0.5193779 2.2067e-03 lowCoverage 0.08172821 lowCoverage chr10 7344550 7345550 35162 PRKCQ ENSG00000065675 0.7956306 266 7 0.7909814 240 7 0.8793267 140 7 0.78180864 236 7 0.8030045 101 5 0.752505 360 7 0.7860714 172 5 0.7840398 140 7 0.7690046 133 5 0.825216 100 5 0.736747 271 7 0.8177008 85 4 0.6917933 125 7 0.6489955 106 4 0.7427646 173 5 0.7197569 146 5 0.9862579 1411 4 0.7221576 359 6 0.8336362 189 7 0.9216352 233 7 0.680087 44 5 0.943182 25 1 0.8705436 192 5 0.605195 117 7 0.6823022 196 6 0.7532015 268 7 0.732570 72 5 0.5223214 89 5 0.838096 182 7 0.7510057 268 7 0.8216920 230 7 0.8704084 226 6 0.762278 176 7 0.765143 164 7 0.568323 388 6 0.537952 78 4 0.689048 144 7 0.6557786 224 7 0.7206740 281 5 0.733120 205 7 0.7819110 282 7 0.77973348 324 5 0.8646070 166 7 0.865960 0.882457 0.905782 0.9021019 0.8611111 0.8999301 0.884500 0.9084553 0.9012305 0.906753 0.900993 0.9314157 0.8952942 0.866777 0.9327339 0.9125092 0.9744913 0.918022 0.937283 0.9569897 0.831397 0.88718220 0.923208 0.9022548 0.9284082 0.8874935 0.8351578 0.8435032 0.927994 0.9151149 0.9276184 0.937742 0.8426986 0.9148375 0.8087507 0.7956921 0.879037 0.8556268 0.9136719 0.9333151 0.9251406 0.8960620 0.942020 4 0.907084 0.880378 0.00557933 7 0.773629 0.6820857 0.09154332 0.3381862 3.2331e-01 insignificant 1 1.0000000 insignificant 0.1963785 0.545388 insignificant 1 1 insignificant 0.03356799 0.402040 insignificant 1 insignificant 0.906739 0.7953964 8.5858e-02 7 0.733602 0.591803 0.1417996 3.9567e-06 1.0000e+00 weaklyHypermeth 7.0656e-05 1.0000e+00 weaklyHypermeth 1.5577e-04 9.9952e-01 weaklyHypermeth 4.0710e-03 1.00000000 weaklyHypermeth 0.1263647 2.0737e-02 weaklyHypermeth 4.0662e-01 insignificant 0.9067014 0.894988 -0.00526487 7 0.7069624 0.685839 0.0211236 9.7999e-01 7.7062e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.6553e-01 6.4352e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.01344253 0.67232843 insignificant 1.00000 insignificant 0.880378 0.7950470 0.08221539 7 0.6820857 0.550983 0.1311029 5.5726e-05 1.0000e+00 weaklyHypermeth 9.1354e-04 1.0000e+00 weaklyHypermeth 2.7486e-02 9.9497e-01 weaklyHypermeth 3.3519e-01 1.00000000 insignificant 0.0927967 1.0066e-01 insignificant 1.0000e+00 insignificant 0.880840 0.894988 -0.01350687 7 0.6820857 0.685839 -0.0037531 9.4433e-01 4.4966e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8502e-01 4.6607e-01 insignificant 1.000000 1.0000e+00 insignificant -0.0201255 0.64791192 insignificant 1.00000 insignificant 0.7959009 0.894988 -0.0902918 7 0.6009828 0.685839 -0.08485601 1.0000000 2.6069e-03 weaklyHypometh 1.00000 3.7241e-02 weaklyHypometh 0.99998986 9.5528e-03 weaklyHypometh 1.00000 1.5660e-01 insignificant -0.1129222 4.0312e-02 weaklyHypometh 0.66085890 insignificant chr10 7401150 7402150 35171 ENSG00000220641 0.8829004 210 5 0.8994937 377 5 0.6800000 40 5 0.93647790 288 5 0.7642857 47 5 0.877595 295 5 0.8698790 104 5 0.9189977 38 3 0.9444444 19 3 1.000000 3 0 0.860205 243 5 0.9333333 12 0 0.8571429 21 3 0.8095238 22 3 0.8818182 37 3 1.0000000 3 0 NA 0 0 0.9105963 228 3 0.9419355 95 3 0.8905696 189 5 1.000000 5 0 1.000000 1 0 0.7406645 137 5 0.572194 64 5 0.8778205 141 5 0.9338063 301 5 0.866667 24 2 1.0000000 11 0 0.951724 93 3 0.9243098 325 5 0.9437896 316 5 0.9057818 217 5 0.116690 208 5 0.008000 88 5 0.000000 27 2 0.485758 68 3 0.073682 287 5 0.4454742 241 5 0.8237524 289 5 0.853659 236 5 0.8666845 346 5 0.82666667 75 3 0.8386874 287 5 0.888167 0.872719 0.666667 0.9126484 0.6071429 0.8729147 0.849798 0.8649961 0.9444444 1.000000 0.858675 0.8888889 0.8571429 0.809524 0.8030303 1.0000000 NA 0.850994 0.903226 0.8592827 1.000000 0.89541954 0.834441 0.4890110 0.8408120 0.9214231 0.7777778 1.0000000 0.919540 0.9214687 0.9340938 0.866779 0.1600000 0.0133333 NA 0.3651515 0.122804 0.1824570 0.8511816 0.8185978 0.8611408 0.8266667 0.846999 0 0.873184 0.894190 -0.01849001 5 0.885680 0.9010142 -0.01533449 0.8569539 1.7094e-01 insignificant 1 1.0000000 insignificant 0.5336064 0.408862 insignificant 1 1 insignificant -0.00573692 0.887514 lowCoverage 1 lowCoverage 0.873184 0.1773667 7.0583e-01 5 0.885680 0.190507 0.6951728 7.5100e-46 1.0000e+00 hypermethylated 2.5033e-43 1.0000e+00 hypermethylated 1.8639e-12 1.0000e+00 hypermethylated 3.1065e-10 1.00000000 hypermethylated 0.6990589 4.3188e-04 lowCoverage 1.4892e-02 lowCoverage 0.8731836 0.845093 0.02910001 5 0.8856797 0.842249 0.0434302 1.4180e-02 9.9187e-01 weaklyHypermeth 3.7315e-01 1.0000000 insignificant 6.3950e-03 9.9804e-01 weaklyHypermeth 0.3228955 1.0000e+00 insignificant 0.04543631 0.02757208 lowCoverage 0.86163 lowCoverage 0.894190 0.1773667 0.71870564 5 0.9010142 0.190507 0.7105073 2.0404e-30 1.0000e+00 hypermethylated 2.9149e-28 1.0000e+00 hypermethylated 3.1657e-10 1.0000e+00 hypermethylated 5.2762e-08 1.00000000 hypermethylated 0.7047959 2.0698e-04 lowCoverage 7.6659e-03 lowCoverage 0.894190 0.845093 0.04959207 5 0.9010142 0.842249 0.0587647 3.8907e-03 9.9355e-01 weaklyHypermeth 1.2969e-01 1.0000e+00 insignificant 4.3120e-03 9.9984e-01 weaklyHypermeth 0.287470 1.0000e+00 insignificant 0.0511732 0.18970111 lowCoverage 1.00000 lowCoverage 0.1773667 0.845093 -0.6673629 5 0.1905069 0.842249 -0.65174258 1.0000000 4.2518e-20 hypomethylated 1.00000 7.0863e-18 hypomethylated 1.00000000 3.8988e-07 hypomethylated 1.00000 6.4979e-05 hypomethylated -0.6536226 7.2038e-04 lowCoverage 0.03932641 lowCoverage chr10 7479550 7480550 35176 ENSG00000220641 0.9232641 423 7 0.8500986 438 7 0.7212242 214 7 0.93965819 431 7 0.9822083 111 7 0.955607 396 7 0.8894737 166 7 0.9594222 265 7 0.8891347 224 7 0.945762 161 7 0.957127 362 7 0.8944328 115 7 0.9586284 319 7 0.9098389 130 7 0.9533099 313 7 0.9780220 104 7 0.8857143 30 3 0.9041016 514 7 0.9563619 317 7 0.9659966 257 7 0.894558 65 7 0.898408 143 7 0.8944920 231 7 0.761745 218 7 0.9576138 87 7 0.9104486 406 7 0.911180 163 7 0.9841270 45 6 0.965756 217 7 0.9211835 394 7 0.8982402 244 7 0.9430005 280 7 0.549698 238 7 0.546259 80 7 1.000000 245 3 0.875000 8 0 0.519410 274 7 0.8155586 313 7 0.9640285 344 7 0.922075 341 7 0.9461820 336 7 0.89271953 376 7 0.9430860 289 7 0.914607 0.839811 0.704667 0.9369425 0.9803828 0.9471438 0.887085 0.9469215 0.8848031 0.924758 0.963762 0.8893446 0.9545745 0.911463 0.9508771 0.9826590 0.9046243 0.896166 0.959123 0.9672968 0.902973 0.88962304 0.894587 0.8812432 0.9554088 0.9050262 0.9115591 0.9843105 0.963463 0.8878629 0.8919712 0.924948 0.5833271 0.5347784 0.7823556 0.8031862 0.444622 0.8158489 0.9626025 0.9204560 0.9408655 0.8922732 0.930042 7 0.920416 0.927769 -0.00520033 7 0.936533 0.8577546 0.07877790 0.3491418 5.8528e-01 insignificant 1 1.0000000 insignificant 0.4350774 0.913963 insignificant 1 1 insignificant 0.00923998 0.663384 insignificant 1 insignificant 0.920280 0.6923077 2.3239e-01 7 0.918399 0.674259 0.2441401 2.2651e-18 1.0000e+00 hypermethylated 1.0437e-16 1.0000e+00 hypermethylated 2.3903e-07 1.0000e+00 hypermethylated 1.1952e-05 1.00000000 hypermethylated 0.2033150 5.9592e-02 insignificant 8.7636e-01 insignificant 0.9204159 0.927639 -0.00942154 7 0.9365325 0.944374 -0.0078417 9.8143e-01 5.5953e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.3136e-01 7.6398e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.01264888 0.49396939 insignificant 1.00000 insignificant 0.929089 0.6925734 0.23949193 7 0.9316406 0.714977 0.2166641 1.3274e-12 1.0000e+00 hypermethylated 5.3096e-11 1.0000e+00 hypermethylated 4.1209e-06 1.0000e+00 hypermethylated 2.1689e-04 1.00000000 hypermethylated 0.1940751 6.8525e-02 insignificant 9.5607e-01 insignificant 0.927769 0.927639 -0.00347367 7 0.8577546 0.944374 -0.0866196 9.0252e-01 1.5646e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6893e-01 4.2887e-01 insignificant 1.000000 1.0000e+00 insignificant -0.0218889 0.29889006 insignificant 1.00000 insignificant 0.6923077 0.927553 -0.2407540 7 0.6742589 0.928481 -0.25422229 1.0000000 7.1418e-07 hypomethylated 1.00000 2.6451e-05 hypomethylated 0.99999999 6.4392e-05 hypomethylated 1.00000 3.7878e-03 hypomethylated -0.2159639 4.9440e-02 weaklyHypometh 0.78476297 insignificant chr10 7511950 7512950 35179 SFMBT2 ENSG00000198879 0.7054167 87 5 0.8510164 136 8 0.6824020 90 8 0.79166667 86 5 0.8933532 88 6 0.819086 142 8 0.7236761 101 6 0.7766786 143 8 0.7814633 76 6 0.768835 127 6 0.601951 200 8 0.7020202 76 6 0.8724853 157 8 0.7220779 47 5 0.7560877 90 6 0.5162698 44 5 0.7424683 881 9 0.9000000 51 5 0.7337132 110 8 0.8036609 138 8 0.731250 34 2 0.908333 29 2 0.7366667 64 7 0.866843 52 5 0.7779758 71 5 0.8431413 189 8 0.800000 35 4 0.5311891 48 2 0.793153 107 8 0.8108840 169 8 0.7660546 173 8 0.8304914 174 8 0.695328 103 8 0.702760 109 8 0.746341 89 8 0.675000 70 6 0.695048 78 6 0.8249934 169 8 0.8311236 127 5 0.753741 117 7 0.6390977 101 5 0.71428571 49 5 0.8571429 72 5 0.818961 0.792718 0.733390 0.7775316 0.8792948 0.8147091 0.743842 0.7050306 0.7411514 0.775410 0.731132 0.6722670 0.8560314 0.722423 0.7879541 0.5641953 0.7252405 0.850633 0.723291 0.7911427 0.792722 0.87637131 0.705977 0.9086799 0.7579509 0.8488548 0.7466245 0.8475461 0.727930 0.7681791 0.7075887 0.844221 0.6865490 0.6653173 0.7379582 0.6310127 0.570745 0.8283715 0.7791751 0.7947559 0.7000666 0.8710443 0.816004 4 0.764808 0.810480 -0.03173026 8 0.734411 0.7780925 -0.04368168 0.9932843 6.0600e-02 insignificant 1 1.0000000 insignificant 0.9809050 0.458497 insignificant 1 1 insignificant -0.02578210 0.460785 insignificant 1 insignificant 0.766620 0.7427184 4.1635e-02 8 0.768606 0.734285 0.0343207 1.1664e-02 9.8588e-01 weaklyHypermeth 1.1664e-01 1.0000e+00 insignificant 2.5033e-02 9.7692e-01 weaklyHypermeth 3.0905e-01 1.00000000 insignificant 0.0339712 2.8677e-01 insignificant 1.0000e+00 insignificant 0.7677596 0.759657 -0.00886695 5 0.7704585 0.725953 0.0445051 9.4634e-02 2.1994e-01 insignificant 1.0000e+00 1.0000000 insignificant 8.9903e-01 1.9846e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.00186188 0.96803949 insignificant 1.00000 insignificant 0.811837 0.7427184 0.07311144 8 0.8073772 0.734285 0.0730918 8.6565e-04 9.9972e-01 weaklyHypermeth 1.1542e-02 1.0000e+00 weaklyHypermeth 9.6293e-03 9.9134e-01 weaklyHypermeth 1.3562e-01 1.00000000 insignificant 0.0597533 1.1140e-01 insignificant 1.0000e+00 insignificant 0.819374 0.759657 0.02745138 5 0.8143075 0.725953 0.0883540 7.8754e-03 7.2147e-01 weaklyHypermeth 2.2501e-01 1.0000e+00 insignificant 6.3964e-01 6.3634e-01 insignificant 1.000000 1.0000e+00 insignificant 0.0239202 0.63176163 insignificant 1.00000 insignificant 0.7404580 0.759657 -0.0563117 5 0.7312805 0.725953 0.00532710 0.4960827 5.3760e-02 insignificant 1.00000 5.1692e-01 insignificant 0.96469266 6.1405e-02 insignificant 1.00000 6.9779e-01 insignificant -0.0358331 4.5868e-01 insignificant 1.00000000 insignificant chr10 7878450 7879450 35181 ATP5C1 ENSG00000165629 0.8323003 328 9 0.7162340 177 9 0.5944444 62 6 0.47837062 191 7 0.8163038 117 9 0.739114 148 9 0.7265242 128 7 0.8038087 154 9 0.6976431 52 6 0.654090 90 9 0.783330 263 9 0.6346154 66 6 0.8461489 141 9 0.7734367 107 9 0.7430129 119 9 0.6818182 23 0 0.7142857 7 0 0.7274558 437 10 0.7501409 123 9 0.7860750 78 9 0.769048 34 5 0.900000 22 4 0.7335071 141 4 0.855128 46 5 0.6450664 160 4 0.7031746 136 8 0.719847 72 6 0.8722222 35 6 0.828775 135 9 0.8412359 113 9 0.6237299 114 9 0.7744709 111 9 0.705802 182 9 0.567901 96 7 0.718552 90 9 0.648148 19 0 0.576553 138 6 0.6805606 124 9 0.8013949 135 6 0.742579 151 9 0.7454482 242 9 0.65181818 217 7 0.8270317 161 7 0.776162 0.736127 0.640945 0.6938239 0.7964138 0.7638652 0.690220 0.7662349 0.8005727 0.673107 0.713138 0.7306178 0.7935254 0.793784 0.6972635 0.5775243 0.7612265 0.725357 0.716997 0.7371101 0.750011 0.85248543 0.702145 0.8095801 0.6492676 0.7109111 0.7228527 0.8495983 0.743132 0.8702486 0.6576598 0.771935 0.6209949 0.5896763 0.7146064 0.6627297 0.714188 0.6406056 0.8699628 0.7432262 0.7848186 0.7549869 0.799224 0 0.740662 0.740840 0.00151447 9 0.804747 0.8032758 0.00147109 0.8918243 5.8262e-01 insignificant 1 1.0000000 insignificant 0.9994643 0.127809 insignificant 1 1 insignificant -0.04722611 0.158990 insignificant 1 insignificant 0.740477 0.6563945 8.5276e-02 9 0.774708 0.610519 0.1641889 9.3861e-06 9.9988e-01 weaklyHypermeth 1.6183e-04 1.0000e+00 weaklyHypermeth 3.1304e-02 9.9317e-01 weaklyHypermeth 3.7267e-01 1.00000000 insignificant 0.0753714 4.2157e-02 weaklyHypermeth 6.7692e-01 insignificant 0.7403846 0.785872 -0.04197313 7 0.7559336 0.699599 0.0563348 5.5169e-01 6.9006e-02 insignificant 1.0000e+00 1.0000000 insignificant 8.7884e-01 7.9278e-02 insignificant 1.0000000 1.0000e+00 insignificant -0.02869671 0.44860916 insignificant 1.00000 insignificant 0.740807 0.6563945 0.08178892 9 0.8114721 0.610519 0.2009531 1.5313e-03 9.9945e-01 weaklyHypermeth 1.8905e-02 1.0000e+00 weaklyHypermeth 8.0462e-03 9.9997e-01 weaklyHypermeth 1.2009e-01 1.00000000 insignificant 0.1225975 5.2883e-03 weaklyHypermeth 1.3313e-01 insignificant 0.740575 0.785872 -0.04480954 7 0.7957614 0.699599 0.0961626 9.9970e-01 2.7655e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.7496e-01 8.7106e-01 insignificant 1.000000 1.0000e+00 insignificant 0.0185294 0.65112436 insignificant 1.00000 insignificant 0.6574074 0.785872 -0.1291044 7 0.6613956 0.699599 -0.03820325 0.9991676 1.6630e-04 weaklyHypometh 1.00000 3.1980e-03 weaklyHypometh 0.99488460 4.8057e-02 weaklyHypometh 1.00000 5.9610e-01 insignificant -0.1040681 3.0333e-02 weaklyHypometh 0.51411793 insignificant chr10 10173750 10174750 35196 ENSG00000203336 0.7712635 178 6 0.6515731 115 6 0.6025641 69 6 0.81372995 125 6 0.6703704 57 6 0.710263 233 6 0.5756944 79 4 0.6399483 102 6 0.5549784 92 6 0.633993 85 4 0.649987 202 6 0.7449495 54 4 0.7459134 98 6 0.5000000 12 2 0.7276696 90 4 0.7061237 35 4 0.7315062 59 4 0.7362637 116 6 0.7806596 137 4 0.6667458 200 6 0.539966 40 4 0.756250 31 4 0.8383255 119 6 0.805556 62 4 0.6814815 41 5 0.7709139 194 6 0.568915 67 6 0.7784271 48 5 0.658059 52 6 0.7469117 232 6 0.8019624 203 6 0.7187261 276 6 0.600818 137 6 0.523837 90 6 0.623057 161 6 0.669192 50 4 0.708814 85 6 0.6594627 257 6 0.6742496 134 6 0.746324 188 6 0.7719997 142 6 0.70196119 115 4 0.7213815 175 6 0.735747 0.618239 0.602604 0.7805205 0.6543020 0.7328337 0.598739 0.7386704 0.6328361 0.675529 0.649829 0.7460839 0.7433468 0.671649 0.7476979 0.6975406 0.7267490 0.673335 0.749137 0.6738330 0.675275 0.75143987 0.785229 0.7974359 0.6843305 0.7121650 0.5785958 0.7177933 0.753603 0.7107555 0.7553454 0.767746 0.5343825 0.5314092 0.6416681 0.6427350 0.614086 0.5925475 0.6932500 0.7810296 0.7688625 0.7786790 0.726162 4 0.708138 0.747253 -0.03725073 6 0.689315 0.7677563 -0.07844086 0.9854862 1.2366e-02 weaklyHypometh 1 0.6045276 insignificant 0.9742766 0.039899 weaklyHypometh 1 1 insignificant -0.04141461 0.217710 insignificant 1 insignificant 0.708665 0.6000000 1.1688e-01 6 0.740170 0.648068 0.0921023 2.3872e-08 9.9999e-01 weaklyHypermeth 5.4255e-07 1.0000e+00 weaklyHypermeth 1.6014e-03 9.9995e-01 weaklyHypermeth 3.0796e-02 1.00000000 weaklyHypermeth 0.0498465 1.4922e-01 insignificant 1.0000e+00 insignificant 0.7081384 0.769231 -0.04768093 6 0.6893155 0.679893 0.0094229 9.9508e-01 3.6562e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant 9.1825e-01 5.1326e-02 insignificant 1.0000000 1.0000e+00 insignificant -0.04247336 0.10893271 insignificant 1.00000 insignificant 0.747067 0.6000000 0.15327694 6 0.7345787 0.648068 0.0865109 3.0427e-09 9.9575e-01 weaklyHypermeth 8.9491e-08 1.0000e+00 weaklyHypermeth 3.4433e-05 9.9232e-01 weaklyHypermeth 1.2013e-03 1.00000000 weaklyHypermeth 0.0912611 2.9790e-02 weaklyHypermeth 4.8836e-01 insignificant 0.747253 0.769231 -0.00885199 6 0.7677563 0.679893 0.0878638 5.7823e-01 6.5598e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.9552e-01 6.8782e-01 insignificant 1.000000 1.0000e+00 insignificant -0.0010587 0.97399316 insignificant 1.00000 insignificant 0.6000000 0.768924 -0.1633023 6 0.6480678 0.634163 0.01390485 0.9999934 1.5260e-07 weaklyHypometh 1.00000 7.2668e-06 weaklyHypometh 0.96073625 2.1632e-04 weaklyHypometh 1.00000 9.4054e-03 weaklyHypometh -0.0923198 1.7900e-02 weaklyHypometh 0.36530857 insignificant chr10 10992950 10993950 35218 ENSG00000222631 0.4948485 37 4 0.3385499 132 5 0.3026852 195 5 0.33333333 3 0 0.3311077 84 5 0.667033 57 5 0.3160766 185 5 0.3962851 153 5 0.3476252 130 5 0.215843 159 5 0.365662 169 5 0.4304085 113 5 0.2148196 157 5 NA 0 0 0.2731723 150 5 0.3379289 113 5 0.4316322 82 5 0.3000000 20 2 0.7794286 93 5 0.5468042 82 5 0.404066 48 5 0.230000 18 1 0.2388571 91 5 0.140000 17 2 0.0000000 6 0 0.3871568 186 5 0.329286 31 4 0.3154762 27 3 0.222456 92 5 0.1313519 205 5 0.5565955 182 5 0.3663442 127 5 0.011765 116 5 0.000000 170 5 NA 0 0 0.000000 17 1 0.233333 15 0 0.0077954 250 5 0.2285714 26 4 0.191558 37 3 0.0000000 26 3 0.04000000 34 3 0.3242424 37 3 0.487365 0.320485 0.301811 0.2687394 0.3006895 0.6611846 0.320188 0.4146041 0.3915099 0.229884 0.339066 0.3962072 0.2336840 NA 0.2918497 0.3731737 0.4627695 0.194915 0.807458 0.6056312 0.415953 0.23983051 0.279177 0.2288136 0.0000000 0.4508563 0.3006053 0.3308111 0.233460 0.1840834 0.5711487 0.355860 0.0209372 0.0000000 NA 0.0000000 0.169492 0.0124204 0.3147700 0.1888620 0.0000000 0.0711864 0.234206 0 0.368496 0.361165 0.00503092 5 0.370446 0.3378666 0.03257927 0.2165645 7.3009e-01 insignificant 1 1.0000000 insignificant 0.0031862 0.985829 weaklyHypermeth 1 1 insignificant 0.11389788 0.046701 lowCoverage 1 lowCoverage 0.368496 0.0140845 3.5333e-01 5 0.370446 0.017660 0.3527861 6.5589e-16 1.0000e+00 hypermethylated 2.6236e-14 1.0000e+00 hypermethylated 1.1660e-08 1.0000e+00 hypermethylated 8.3283e-07 1.00000000 hypermethylated 0.3401183 2.1838e-04 lowCoverage 8.3993e-03 lowCoverage 0.3684957 0.137500 0.23279293 3 0.3704458 0.127755 0.2426910 1.4241e-07 1.0000e+00 lowCoverage 2.8482e-05 1.0000000 lowCoverage 1.1768e-05 1.0000e+00 lowCoverage 0.0039227 1.0000e+00 lowCoverage 0.23382255 0.01236406 lowCoverage 0.58769 lowCoverage 0.361165 0.0140845 0.34878291 5 0.3378666 0.017660 0.3202068 1.2363e-11 1.0000e+00 hypermethylated 4.5789e-10 1.0000e+00 hypermethylated 2.5336e-05 1.0000e+00 hypermethylated 1.0134e-03 1.00000000 hypermethylated 0.2262204 4.0905e-03 lowCoverage 1.0764e-01 lowCoverage 0.361165 0.137500 0.22393566 3 0.3378666 0.127755 0.2101118 2.5162e-05 1.0000e+00 lowCoverage 1.6930e-03 1.0000e+00 lowCoverage 4.1672e-03 9.9976e-01 lowCoverage 0.287470 1.0000e+00 lowCoverage 0.1199247 0.14207365 lowCoverage 1.00000 lowCoverage 0.0140845 0.137500 -0.1230702 3 0.0176597 0.127755 -0.11009508 0.9975838 2.7939e-03 lowCoverage 1.00000 3.8805e-02 lowCoverage 0.98881710 5.3571e-02 lowCoverage 1.00000 6.3775e-01 lowCoverage -0.1062958 2.0027e-01 lowCoverage 1.00000000 lowCoverage chr10 11980150 11981150 35246 C10orf47 ENSG00000148426 0.7444444 76 3 0.8406926 139 8 0.6734082 167 7 0.88271605 70 3 0.6138211 142 4 0.769755 111 8 0.8650794 86 9 0.8617337 215 9 0.6297727 103 6 0.849578 194 3 0.850816 292 10 0.4242424 52 3 0.9053030 117 4 0.9890110 82 3 0.8593883 167 3 0.4148148 36 4 0.3888889 14 1 0.3642451 115 4 0.3930035 184 3 0.9518581 125 3 0.686364 59 9 0.742795 54 3 0.7437500 78 5 0.616667 72 4 0.9002165 57 5 0.7989711 276 8 0.721818 174 8 0.5812105 74 6 0.410754 167 4 0.8089862 287 9 0.8107615 285 9 0.8715830 148 8 0.829004 153 8 0.685448 160 5 0.645161 194 4 0.483333 29 2 0.543089 80 8 0.8352273 331 10 0.6944444 63 3 0.740741 61 3 0.8333333 39 3 0.71515152 67 3 0.5958333 102 8 0.962366 0.853233 0.835022 0.9838710 0.7768424 0.8008685 0.987097 0.9536361 0.7743402 0.920122 0.927786 0.9252199 0.9599218 0.958420 0.9592994 0.7741935 0.8738271 0.854829 0.914067 0.9564080 0.725806 0.86470787 0.949597 0.9569892 0.9392373 0.9465337 0.9123493 0.9145102 0.878246 0.9570390 0.9463191 0.942434 0.9011472 0.8599494 0.9261186 0.9569892 0.703687 0.9819159 0.9650538 0.9503136 0.9792115 0.9276637 0.951075 3 0.872383 0.894798 -0.02549346 7 0.724433 0.7062065 0.01822695 0.9451208 4.4645e-01 insignificant 1 1.0000000 insignificant 0.9142810 0.770381 insignificant 1 1 insignificant -0.01086105 0.860903 lowCoverage 1 lowCoverage 0.872830 0.8740741 -1.4146e-02 7 0.704633 0.675816 0.0288174 4.7509e-02 2.3865e-01 inconclusive 4.3989e-01 1.0000e+00 insignificant 4.1133e-01 4.4584e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0434182 5.7574e-01 lowCoverage 1.0000e+00 lowCoverage 0.8726833 0.873494 -0.00054430 3 0.7652395 0.643125 0.1221149 8.5265e-03 2.9272e-01 lowCoverage 2.5078e-01 1.0000000 lowCoverage 3.0999e-01 1.3059e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage -0.00227203 0.97057465 lowCoverage 1.00000 lowCoverage 0.897332 0.8722281 0.01852129 7 0.8206126 0.619498 0.2011145 7.8040e-02 7.5418e-01 insignificant 6.7861e-01 1.0000e+00 insignificant 3.0379e-01 8.4407e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0542793 4.6272e-01 insignificant 1.0000e+00 insignificant 0.895255 0.873494 0.02064577 3 0.7436986 0.643125 0.1005740 3.5649e-02 4.3186e-01 lowCoverage 7.9221e-01 1.0000e+00 lowCoverage 4.3264e-01 1.4553e-01 lowCoverage 1.000000 1.0000e+00 lowCoverage 0.0085890 0.87839219 lowCoverage 1.00000 lowCoverage 0.8750000 0.875758 -0.0028560 3 0.7433977 0.657437 0.08596061 0.0803466 6.5688e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.53953126 3.7722e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage -0.0456903 5.3345e-01 lowCoverage 1.00000000 lowCoverage chr10 12409750 12410750 35257 CDC123 ENSG00000151465 0.8294471 258 7 0.6319444 66 6 0.6286131 89 6 0.89560440 125 7 0.7414355 83 7 0.890067 213 7 0.6834339 90 6 0.8010980 103 7 0.6866375 118 5 0.797980 94 4 0.824990 178 7 0.7569728 60 6 0.6667819 118 6 0.4285714 9 1 0.7806548 100 5 0.8044266 61 5 0.6525641 69 5 0.8447743 96 5 0.7048720 96 6 0.8765385 213 7 0.793651 43 4 0.882469 111 7 0.8456874 151 7 0.767202 55 4 0.8084848 50 5 0.7495045 99 6 0.691998 55 4 0.9020408 45 5 0.824631 101 6 0.8297820 162 7 0.6971296 111 6 0.8036502 220 5 0.785160 143 6 0.518399 85 6 0.680357 88 5 0.830669 65 5 0.672360 80 6 0.7490228 143 6 0.9170276 208 7 0.772335 165 5 0.8044167 114 5 0.72965678 181 5 0.9109812 141 5 0.841316 0.728220 0.704419 0.8974359 0.7333999 0.8818637 0.745359 0.8556567 0.7594158 0.895776 0.835315 0.7953644 0.7626142 0.800898 0.8508267 0.8735213 0.7297462 0.790054 0.781818 0.8445261 0.796537 0.87240958 0.844429 0.7945441 0.8156801 0.8586534 0.7806448 0.8984127 0.841944 0.8507708 0.7518182 0.857163 0.7192306 0.5378129 0.6403139 0.7302336 0.710218 0.8194433 0.8910285 0.8415697 0.8434343 0.7818040 0.906027 4 0.804824 0.832086 -0.02987080 6 0.791126 0.8141369 -0.02301047 0.9063673 2.0673e-02 weaklyHypometh 1 0.8086949 insignificant 0.9499756 0.034430 weaklyHypometh 1 1 insignificant -0.05331546 0.102187 insignificant 1 insignificant 0.804824 0.7400662 6.1960e-02 7 0.791126 0.746169 0.0449576 3.5166e-03 7.1013e-01 weaklyHypermeth 3.9073e-02 1.0000e+00 weaklyHypermeth 1.4847e-02 7.2008e-01 weaklyHypermeth 2.0620e-01 1.00000000 insignificant 0.0403757 4.5560e-01 insignificant 1.0000e+00 insignificant 0.8048236 0.861557 -0.05098725 5 0.7911264 0.864818 -0.0736914 9.9850e-01 1.0852e-02 weaklyHypometh 1.0000e+00 0.6592340 insignificant 9.9821e-01 1.3154e-02 weaklyHypometh 1.0000000 1.0000e+00 insignificant -0.08051299 0.11271323 insignificant 1.00000 insignificant 0.832086 0.7400662 0.08916048 6 0.8141369 0.746169 0.0679681 3.6275e-04 9.5415e-01 weaklyHypermeth 5.1092e-03 1.0000e+00 weaklyHypermeth 2.4195e-03 9.3181e-01 weaklyHypermeth 4.1008e-02 1.00000000 weaklyHypermeth 0.0936912 9.7177e-02 insignificant 1.0000e+00 insignificant 0.832086 0.861557 -0.01752051 5 0.8141369 0.864818 -0.0506810 9.3220e-01 1.7182e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.6182e-01 4.8296e-01 insignificant 1.000000 1.0000e+00 insignificant -0.0271975 0.54042763 insignificant 1.00000 insignificant 0.7400662 0.861557 -0.1148985 5 0.7461688 0.864818 -0.11864905 0.9984914 2.7797e-04 weaklyHypometh 1.00000 5.2446e-03 weaklyHypometh 0.99381433 6.0797e-03 weaklyHypometh 1.00000 1.1054e-01 insignificant -0.1208887 6.9096e-02 insignificant 0.92503736 insignificant chr10 12809350 12810350 35279 MIR548Q ENSG00000221331 0.9155494 207 5 0.7845599 69 5 0.1563636 51 5 0.78408445 199 5 0.7000000 14 0 0.782659 239 5 NA 0 0 0.8555556 44 5 0.3600000 17 2 0.872222 30 3 0.704714 131 5 0.3666667 30 3 0.7822837 108 5 NA 0 0 0.7233333 43 5 0.4000000 15 2 0.7000000 12 0 0.4455515 230 5 0.7021678 44 4 0.8365863 170 5 0.851190 32 3 0.586667 83 5 0.9086541 99 5 0.817857 48 5 0.8024837 79 5 0.8474828 106 5 0.720238 86 5 0.8750000 8 0 0.720216 50 5 0.8162246 124 5 0.6865385 73 5 0.8979199 184 5 0.239026 99 5 0.151099 50 5 0.779720 239 5 0.733333 13 0 0.188889 34 4 0.7141148 68 3 0.5570364 119 5 0.496956 136 5 0.7453242 118 5 0.35702102 130 5 0.7774897 196 5 0.890654 0.737928 0.153642 0.7182738 0.7017544 0.7446357 NA 0.8434698 0.3625731 0.846491 0.840829 0.3618421 0.7947377 NA 0.7169591 0.3333333 0.6725146 0.547063 0.688106 0.8220240 0.797515 0.55964912 0.858245 0.7556809 0.7972136 0.8355487 0.7130326 0.8551006 0.716450 0.7994195 0.7886865 0.895497 0.2390028 0.1627145 0.7857965 0.8070175 0.169591 0.7065181 0.5491771 0.3659980 0.6873146 0.2347700 0.659117 0 0.724138 0.814241 -0.09135854 5 0.715955 0.7864293 -0.07047392 0.9927603 9.5420e-03 weaklyHypometh 1 0.5632114 insignificant 0.9945744 0.023525 weaklyHypometh 1 1 insignificant -0.13463394 0.028969 lowCoverage 1 lowCoverage 0.724347 0.6103380 1.1984e-01 5 0.725813 0.558351 0.1674622 1.1382e-04 9.5108e-01 weaklyHypermeth 1.6969e-03 1.0000e+00 weaklyHypermeth 3.0892e-02 9.9414e-01 weaklyHypermeth 3.7219e-01 1.00000000 insignificant 0.1918751 1.9591e-01 lowCoverage 1.0000e+00 lowCoverage 0.7241379 0.553802 0.19141202 5 0.7159554 0.596870 0.1190853 8.8337e-05 9.5883e-01 weaklyHypermeth 5.8891e-03 1.0000000 weaklyHypermeth 1.4648e-02 9.6022e-01 weaklyHypermeth 0.5859126 1.0000e+00 insignificant 0.07280666 0.45970036 lowCoverage 1.00000 lowCoverage 0.814700 0.6103380 0.21842724 5 0.8103819 0.558351 0.2520309 3.5092e-06 9.9979e-01 hypermethylated 6.6210e-05 1.0000e+00 hypermethylated 2.0396e-03 9.9994e-01 weaklyHypermeth 3.5166e-02 1.00000000 weaklyHypermeth 0.3265091 4.5379e-02 lowCoverage 7.0905e-01 lowCoverage 0.814815 0.555079 0.28597253 5 0.8169394 0.654460 0.1624793 3.4567e-08 9.9578e-01 hypermethylated 1.7284e-05 1.0000e+00 hypermethylated 7.0723e-05 9.9790e-01 hypermethylated 0.017681 1.0000e+00 hypermethylated 0.2074406 0.05472817 lowCoverage 1.00000 lowCoverage 0.6103380 0.549275 0.0710018 5 0.5583510 0.516244 0.04210689 0.3452601 4.4976e-01 insignificant 1.00000 1.0000e+00 insignificant 0.83858170 5.4522e-01 insignificant 1.00000 1.0000e+00 insignificant -0.1190685 4.3934e-01 lowCoverage 1.00000000 lowCoverage chr10 12931150 12932150 35283 MIR548Q ENSG00000221331 0.9147146 336 7 0.8364028 308 8 0.8874904 241 8 0.91561266 267 5 0.8210032 158 7 0.919746 323 7 0.8706289 237 8 0.8943393 274 8 0.8806239 280 8 0.894700 214 7 0.935942 347 8 0.8229923 144 7 0.8537644 280 7 0.9080766 75 3 0.8543100 234 7 0.8327991 95 6 0.7894345 82 5 0.8807557 267 6 0.9210484 297 8 0.7842088 250 7 0.927630 93 7 0.704762 58 3 0.8413733 198 7 0.976543 90 7 0.8339015 40 4 0.9326998 303 8 0.877525 100 6 0.7861227 130 6 0.911479 318 8 0.9179126 339 8 0.9026194 370 8 0.9179897 290 7 0.140036 326 8 0.084866 253 8 0.065776 465 8 0.136218 35 3 0.328836 253 7 0.2789550 372 8 0.9189946 258 6 0.871894 262 7 0.8486917 252 4 0.78828160 290 6 0.7126897 202 6 0.897054 0.779682 0.866937 0.8955686 0.8207009 0.9007076 0.821005 0.8541541 0.8219954 0.866336 0.924844 0.8108816 0.8134142 0.865481 0.8633144 0.7980600 0.7512087 0.802776 0.891616 0.8825453 0.893041 0.66825397 0.834882 0.9826279 0.8153361 0.9236482 0.8139831 0.8589183 0.857788 0.8723545 0.8576574 0.906036 0.0819368 0.0613630 0.0708930 0.0926435 0.242160 0.1189919 0.8456151 0.8008339 0.7968659 0.7061851 0.713024 3 0.870248 0.882782 -0.01208782 8 0.883006 0.8381629 0.04484325 0.9975084 1.6046e-01 insignificant 1 1.0000000 insignificant 0.9833408 0.193644 insignificant 1 1 insignificant -0.00661684 0.785034 insignificant 1 insignificant 0.870166 0.1514085 7.2579e-01 8 0.857008 0.206535 0.6504722 3.2167e-84 1.0000e+00 hypermethylated 3.2167e-81 1.0000e+00 hypermethylated 6.5272e-21 1.0000e+00 hypermethylated 6.5272e-18 1.00000000 hypermethylated 0.6984820 8.7251e-06 hypermethylated 4.7693e-04 hypermethylated 0.8702956 0.738133 0.08659469 6 0.8808001 0.849197 0.0316034 2.6047e-03 8.9498e-01 weaklyHypermeth 9.3026e-02 1.0000000 weaklyHypermeth 3.6225e-02 7.5287e-01 weaklyHypermeth 1.0000000 1.0000e+00 insignificant 0.04281931 0.30421339 insignificant 1.00000 insignificant 0.882960 0.1514085 0.73287905 8 0.9133102 0.206535 0.7067749 1.1800e-58 1.0000e+00 hypermethylated 1.1800e-55 1.0000e+00 hypermethylated 1.9936e-16 1.0000e+00 hypermethylated 1.9936e-13 1.00000000 hypermethylated 0.7050988 8.9087e-07 hypermethylated 9.8985e-05 hypermethylated 0.882910 0.738133 0.08794536 6 0.9024740 0.849197 0.0532773 1.5291e-03 9.9482e-01 weaklyHypermeth 6.3714e-02 1.0000e+00 weaklyHypermeth 2.2069e-02 9.0737e-01 weaklyHypermeth 0.788182 1.0000e+00 insignificant 0.0494362 0.27444572 insignificant 1.00000 insignificant 0.1509988 0.738133 -0.6131195 6 0.1698522 0.849197 -0.67934445 1.0000000 8.1866e-28 hypomethylated 1.00000 8.1866e-25 hypomethylated 1.00000000 5.6145e-11 hypomethylated 1.00000 2.8072e-08 hypomethylated -0.6556627 1.0805e-06 hypomethylated 0.00054026 hypomethylated chr10 13464350 13465350 35294 SEPHS1 ENSG00000086475 0.5107774 249 6 0.4468898 208 5 0.5681818 40 3 0.56937267 290 6 0.6896825 50 4 0.693960 196 6 0.3670068 63 5 0.7070537 60 4 0.6916667 27 3 0.500000 18 2 0.513537 152 5 0.4722222 10 0 0.4952381 17 1 0.4194444 15 1 0.7142857 14 0 0.5000000 2 0 NA 0 0 0.4864333 149 4 0.8318520 88 5 0.6032178 119 6 0.545714 22 3 0.333333 10 0 0.3518385 71 4 0.603704 40 5 0.5791840 107 5 0.6210716 212 6 0.496471 37 3 0.8111111 28 2 0.609486 47 3 0.4536149 216 6 0.7500782 168 6 0.6383487 148 6 0.236518 110 5 0.313333 40 3 0.181250 409 6 0.355263 164 5 0.236806 89 5 0.3957056 209 6 0.6284786 277 6 0.490344 246 6 0.6699701 323 6 0.74618056 137 4 0.5776183 341 6 0.746659 0.575522 0.440115 0.6988536 0.7396070 0.7662898 0.515590 0.6326288 0.7182540 0.454316 0.584458 0.4484127 0.7650794 0.551984 0.6309524 0.7107938 NA 0.522349 0.841787 0.6735920 0.579932 0.40841522 0.433783 0.5132275 0.5776029 0.7057879 0.5787115 0.7452381 0.644035 0.5212681 0.8622391 0.636863 0.2789715 0.3746032 0.1523810 0.5275689 0.305688 0.4600714 0.6078504 0.6469750 0.7449114 0.8345734 0.646937 0 0.574589 0.602541 0.02629212 6 0.562481 0.7347146 -0.17223322 0.6339306 8.1817e-01 insignificant 1 1.0000000 insignificant 0.4754841 0.865952 insignificant 1 1 insignificant 0.00124877 0.980261 lowCoverage 1 lowCoverage 0.574274 0.2242899 3.0854e-01 6 0.509700 0.247268 0.2624312 4.5444e-15 8.2046e-01 hypermethylated 1.6831e-13 1.0000e+00 hypermethylated 3.7887e-05 9.9434e-01 hypermethylated 1.1143e-03 1.00000000 hypermethylated 0.2809325 2.3538e-05 lowCoverage 1.1208e-03 lowCoverage 0.5746141 0.478064 -0.01398935 6 0.5812160 0.607705 -0.0264887 8.7738e-01 3.9720e-01 insignificant 1.0000e+00 1.0000000 insignificant 8.7738e-01 4.6933e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.05510670 0.31595820 lowCoverage 1.00000 lowCoverage 0.600365 0.2242899 0.29166953 6 0.6757623 0.247268 0.4284940 5.8352e-08 9.9381e-01 hypermethylated 1.5356e-06 1.0000e+00 hypermethylated 1.2802e-04 1.0000e+00 hypermethylated 3.7653e-03 1.00000000 hypermethylated 0.2796837 8.3503e-05 lowCoverage 3.6306e-03 lowCoverage 0.596313 0.478097 -0.05731690 6 0.5355040 0.592318 -0.0568143 9.5877e-01 1.4535e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8287e-01 4.9274e-02 weaklyHypometh 1.000000 1.0000e+00 insignificant -0.0563555 0.36393194 lowCoverage 1.00000 lowCoverage 0.2244094 0.478064 -0.3267467 6 0.2875692 0.607705 -0.32013539 0.8832461 2.1498e-12 hypomethylated 1.00000 1.5356e-10 hypomethylated 0.99805767 1.0394e-05 hypomethylated 1.00000 7.9955e-04 hypomethylated -0.3360392 2.7466e-04 hypomethylated 0.02746610 hypomethylated chr10 14970350 14971350 35336 SUV39H2 ENSG00000152455 0.7829630 282 6 0.7554803 250 6 0.7739371 90 6 0.82327355 180 7 0.8222611 66 5 0.823557 441 6 0.5469634 125 5 0.7566724 118 6 0.7177822 66 5 0.756197 51 5 0.882285 267 6 0.9333333 29 5 0.8146259 85 6 0.8932749 63 5 0.9025190 72 6 0.8333333 13 0 1.0000000 568 3 0.7954973 250 7 0.7798991 77 6 0.8349083 513 6 0.614583 56 5 0.875000 16 2 0.7359672 142 6 0.851825 115 6 0.9000000 42 3 0.8013128 259 7 0.491682 85 5 0.6793210 59 4 0.850370 119 6 0.8015829 223 7 0.8464170 290 7 0.7887560 433 6 0.878805 152 6 0.804321 96 6 0.380385 77 4 0.888889 8 0 0.684915 122 6 0.8586079 273 7 0.8290019 410 6 0.936511 262 6 0.9017042 234 6 0.89225630 136 6 0.8265119 232 6 0.834324 0.797552 0.704467 0.8838685 0.8026302 0.8155541 0.801632 0.9073062 0.8396044 0.890818 0.871879 0.9373134 0.8732232 0.901774 0.8856352 0.8432836 0.9093347 0.815693 0.897517 0.8309139 0.809080 0.85878773 0.814319 0.8590451 0.8323383 0.8455580 0.7793402 0.8480307 0.857446 0.8391081 0.8813909 0.834689 0.8783728 0.8453013 0.4910862 0.8199078 0.773153 0.8779535 0.8506561 0.9380266 0.8890074 0.8755562 0.893654 1 0.877149 0.854269 0.00889010 6 0.721316 0.6540787 0.06723698 0.2410525 8.1378e-01 insignificant 1 1.0000000 insignificant 0.2313784 0.971073 insignificant 1 1 insignificant 0.04170339 0.316684 insignificant 1 insignificant 0.877954 0.8530220 6.9032e-03 6 0.764145 0.817583 -0.0534385 8.5991e-02 4.2399e-01 insignificant 7.5431e-01 1.0000e+00 insignificant 6.5431e-02 8.3116e-01 insignificant 6.9541e-01 1.00000000 insignificant 0.0621177 4.8165e-01 lowCoverage 1.0000e+00 lowCoverage 0.8785854 0.929356 -0.04821164 6 0.8018796 0.873240 -0.0713608 9.9940e-01 1.1212e-02 weaklyHypometh 1.0000e+00 0.6592340 insignificant 9.8847e-01 9.8055e-02 insignificant 1.0000000 1.0000e+00 insignificant -0.06575895 0.04690126 weaklyHypometh 1.00000 insignificant 0.856987 0.8530220 0.00017989 6 0.7550984 0.817583 -0.0624847 1.6134e-01 2.9411e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.2688e-01 8.1299e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0204143 8.2155e-01 lowCoverage 1.0000e+00 lowCoverage 0.857377 0.929356 -0.05492550 6 0.7915411 0.873240 -0.0816994 9.9947e-01 3.6179e-04 weaklyHypometh 1.0000e+00 1.1628e-01 insignificant 9.9857e-01 4.1005e-04 weaklyHypometh 1.000000 2.0503e-01 insignificant -0.1074623 0.01912468 weaklyHypometh 1.00000 insignificant 0.8526171 0.929356 -0.0564363 6 0.7915235 0.873240 -0.08171686 0.9814210 1.1919e-02 weaklyHypometh 1.00000 1.4898e-01 insignificant 0.97690395 4.2459e-03 weaklyHypometh 1.00000 8.8542e-02 weaklyHypometh -0.1278767 1.7559e-01 lowCoverage 1.00000000 lowCoverage chr10 17521750 17522750 35395 ENSG00000204832 0.6869388 131 5 0.8500751 121 5 0.5466811 42 4 0.64943311 88 5 0.8766667 37 4 0.866142 112 5 0.7205128 57 4 0.8838471 86 5 0.7375000 31 4 0.722222 31 1 0.792484 118 5 0.9074074 20 3 0.8187364 51 4 0.8263889 34 4 0.7288889 35 4 0.8888889 9 1 0.7777778 9 1 0.6352108 82 5 0.7688172 49 2 0.6419350 85 5 0.715909 26 2 0.666667 18 1 0.7711663 96 5 0.807778 44 4 0.7512626 24 2 0.8664335 160 5 0.807778 34 3 0.9666667 25 4 0.840952 38 4 0.6776220 148 5 0.6801347 154 5 0.8681901 126 5 0.753578 59 4 0.739103 52 2 0.643155 109 5 0.942857 14 1 0.764286 53 5 0.8464975 142 5 0.7521128 156 6 0.811800 151 5 0.6482143 89 4 0.76666667 67 4 0.8015873 123 5 0.665202 0.737454 0.504323 0.5996139 0.8042793 0.8544699 0.732328 0.8279838 0.7155405 0.635886 0.680545 0.8951942 0.8370606 0.673423 0.5678679 0.7339518 0.7792962 0.695065 0.686428 0.7188916 0.707617 0.63252434 0.644929 0.6120120 0.7445400 0.7568803 0.8560060 0.9774775 0.710746 0.6483955 0.7230091 0.737518 0.6504125 0.6674463 0.5693372 0.8416988 0.616313 0.7525405 0.7713366 0.6977312 0.6888514 0.6855856 0.633884 1 0.768730 0.805151 -0.02582474 5 0.656827 0.6631154 -0.00628830 0.9458184 2.2420e-02 weaklyHypometh 1 0.8086949 insignificant 0.8395206 0.280934 insignificant 1 1 insignificant -0.01871892 0.595715 lowCoverage 1 lowCoverage 0.768730 0.7109557 7.0449e-02 5 0.656827 0.757089 -0.1002620 1.3400e-01 8.1415e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.5525e-01 5.4894e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0152515 7.5582e-01 lowCoverage 1.0000e+00 lowCoverage 0.7687296 0.812287 -0.02073072 5 0.6568271 0.779459 -0.1226320 9.4303e-01 7.2559e-04 weaklyHypometh 1.0000e+00 0.1036555 insignificant 7.9469e-01 2.9973e-02 weaklyHypometh 1.0000000 1.0000e+00 insignificant 0.01025147 0.78643323 lowCoverage 1.00000 lowCoverage 0.805151 0.7109557 0.10213293 5 0.6631154 0.757089 -0.0939737 9.8334e-03 9.8194e-01 weaklyHypermeth 1.0138e-01 1.0000e+00 insignificant 6.9023e-01 7.7106e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0034674 9.4565e-01 lowCoverage 1.0000e+00 lowCoverage 0.805151 0.812287 0.01077901 5 0.6631154 0.779459 -0.1163437 7.9645e-01 8.0531e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 8.2347e-01 1.3349e-01 insignificant 1.000000 1.0000e+00 insignificant 0.0289704 0.47815531 lowCoverage 1.00000 lowCoverage 0.7109557 0.812287 -0.0946888 5 0.7570891 0.779459 -0.02237001 0.6591096 9.1293e-02 insignificant 1.00000 8.3755e-01 insignificant 0.71648824 7.2669e-01 insignificant 1.00000 1.0000e+00 insignificant 0.0255030 6.2893e-01 lowCoverage 1.00000000 lowCoverage chr10 21835250 21836250 35498 C10orf114 ENSG00000204682 0.0000000 18 1 0.0390056 118 5 0.1640394 113 5 0.00000000 16 0 0.0876037 169 5 0.133333 13 0 0.1275692 178 5 0.0590909 91 4 0.0663636 94 5 0.055238 97 5 0.038968 183 5 0.1061227 136 5 0.0908226 102 5 NA 0 0 0.0928741 184 5 0.0216374 220 5 0.1100411 111 5 0.1066667 25 4 0.0814762 196 5 0.0571429 29 3 0.143131 85 5 0.000000 1 0 0.0788904 111 5 0.040000 36 5 0.0000000 1 0 0.0220238 187 5 0.083333 12 1 0.0000000 28 3 0.030199 96 5 0.0385106 182 5 0.0474936 116 5 0.0000000 16 0 0.920635 38 4 0.957143 57 5 1.000000 99 4 0.300000 13 0 0.800000 10 0 0.0403361 68 5 0.0000000 4 0 0.410000 20 2 0.0000000 4 0 0.00000000 8 0 NA 0 0 0.000000 0.019876 0.115184 0.0000000 0.0809878 0.1176471 0.099366 0.0762032 0.0548128 0.047619 0.037372 0.0933465 0.0687293 NA 0.0710334 0.0150785 0.0551354 0.117647 0.052591 0.0168067 0.103535 NA 0.088112 0.0117647 NA 0.0211835 0.0204335 0.0000000 0.026311 0.0213392 0.0464231 0.000000 0.9094304 0.9369748 0.9693277 0.2647059 0.941176 0.0257044 0.0098039 0.3088235 0.0000000 0.0000000 NA 0 0.069756 0.048220 0.02294906 5 0.081809 0.0525000 0.02930884 0.0065197 9.9600e-01 weaklyHypermeth 1 1.0000000 insignificant 0.0116549 0.999634 weaklyHypermeth 1 1 insignificant 0.03538545 0.039152 lowCoverage 1 lowCoverage 0.069756 0.7122807 -6.5073e-01 4 0.081809 0.687677 -0.6058682 1.0000e+00 7.7025e-23 lowCoverage 1.0000e+00 7.7025e-20 lowCoverage 1.0000e+00 7.0778e-07 lowCoverage 1.0000e+00 0.00070778 lowCoverage -0.5940017 1.5010e-02 lowCoverage 3.1516e-01 lowCoverage 0.0697563 0.222222 -0.15363826 0 0.0818088 0.213889 -0.1320800 8.9442e-01 1.5331e-05 noCoverage 1.0000e+00 0.0051103 noCoverage 1.4430e-01 9.8423e-01 noCoverage 1.0000000 1.0000e+00 noCoverage -0.02681601 0.81114975 lowCoverage 1.00000 lowCoverage 0.048220 0.7122807 -0.67068783 4 0.0525000 0.687677 -0.6351770 1.0000e+00 1.5086e-13 lowCoverage 1.0000e+00 1.5086e-10 lowCoverage 1.0000e+00 2.7365e-07 lowCoverage 1.0000e+00 0.00027365 lowCoverage -0.6293871 1.1950e-02 lowCoverage 2.5426e-01 lowCoverage 0.048220 0.222222 -0.17576793 0 0.0525000 0.213889 -0.1613889 9.7867e-01 1.1499e-03 noCoverage 1.0000e+00 1.9390e-01 noCoverage 6.5498e-01 8.0418e-01 noCoverage 1.000000 1.0000e+00 noCoverage -0.0622015 0.58828746 lowCoverage 1.00000 lowCoverage 0.7122807 0.222222 0.4820610 0 0.6876770 0.213889 0.47378815 0.0012371 9.9988e-01 noCoverage 0.17674 1.0000e+00 noCoverage 0.00048294 1.0000e+00 noCoverage 0.24656 1.0000e+00 noCoverage 0.5671857 1.9597e-02 lowCoverage 0.39194566 lowCoverage chr10 24897250 24898250 35578 KIAA1217 ENSG00000120549 0.6839077 248 9 0.7228776 182 8 0.6268519 91 8 0.74604379 189 9 0.7727679 57 8 0.696059 308 8 0.7387663 74 5 0.6537832 148 8 0.4607766 65 7 0.945339 77 4 0.758869 240 9 0.6592593 45 4 0.8069251 161 9 0.7564103 44 5 0.7821451 102 8 0.5888889 39 3 0.7524133 85 5 0.8832500 125 8 0.6778787 183 8 0.7912811 322 9 0.895802 58 6 0.931929 75 5 0.7033078 159 9 0.799401 74 6 0.8510417 56 5 0.7541203 242 9 0.668429 100 5 0.6400000 45 5 0.731249 159 8 0.7800414 212 9 0.7083255 196 9 0.7515062 401 9 0.731764 167 9 0.730144 130 9 0.639283 156 8 0.698165 45 4 0.670671 102 9 0.7771260 254 9 0.7513207 259 9 0.813664 181 8 0.6180140 147 8 0.65961855 144 5 0.7152700 207 8 0.802717 0.800543 0.758501 0.7887083 0.7552824 0.8154575 0.778385 0.7470221 0.6764813 0.873349 0.803485 0.7872697 0.8358475 0.783078 0.7887029 0.7909548 0.7362601 0.895389 0.728284 0.8381389 0.892084 0.91577392 0.832487 0.7541002 0.8450608 0.7422913 0.7521576 0.6886746 0.769011 0.8105387 0.8116551 0.766614 0.7341773 0.6813471 0.7136471 0.7353989 0.700305 0.7351475 0.8056407 0.8476498 0.7094938 0.8148893 0.820361 4 0.776302 0.785231 0.00220209 8 0.744879 0.7487316 -0.00385263 0.5512124 5.1763e-01 insignificant 1 1.0000000 insignificant 0.8234092 0.366233 insignificant 1 1 insignificant -0.04270465 0.228889 insignificant 1 insignificant 0.776699 0.7166276 6.8615e-02 8 0.789402 0.760493 0.0289097 1.2070e-04 9.9114e-01 weaklyHypermeth 1.7493e-03 1.0000e+00 weaklyHypermeth 4.2598e-03 9.2128e-01 weaklyHypermeth 6.9833e-02 1.00000000 weaklyHypermeth 0.0173659 5.7852e-01 insignificant 1.0000e+00 insignificant 0.7764960 0.784648 -0.00087960 8 0.7826284 0.774793 0.0078351 6.3420e-01 6.5005e-01 insignificant 1.0000e+00 1.0000000 insignificant 4.5785e-01 7.4686e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.01364728 0.75004050 insignificant 1.00000 insignificant 0.785432 0.7166276 0.06116117 9 0.7485010 0.760493 -0.0119917 3.9566e-04 8.5932e-01 weaklyHypermeth 5.4200e-03 1.0000e+00 weaklyHypermeth 4.0368e-03 9.8187e-01 weaklyHypermeth 6.4076e-02 1.00000000 weaklyHypermeth 0.0600706 8.4171e-02 insignificant 1.0000e+00 insignificant 0.786199 0.784648 -0.00317996 9 0.7900177 0.774793 0.0152245 5.5902e-01 6.2224e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.3889e-01 9.4355e-01 insignificant 1.000000 1.0000e+00 insignificant 0.0563519 0.22153845 insignificant 1.00000 insignificant 0.7162954 0.784648 -0.0694334 9 0.7365419 0.774793 -0.03825130 0.9839555 2.7098e-03 weaklyHypometh 1.00000 3.8167e-02 weaklyHypometh 0.88844131 1.3223e-02 weaklyHypometh 1.00000 2.1327e-01 insignificant -0.0037186 9.2813e-01 insignificant 1.00000000 insignificant chr10 25013650 25014650 35584 ENSG00000199535 0.7858333 93 5 0.5544935 90 5 0.6520979 60 5 0.85714286 76 5 0.7642857 37 5 0.845628 122 5 0.8000000 26 1 0.8375000 82 5 0.5837535 44 5 0.442857 49 5 0.650794 117 5 0.9333333 16 0 0.8166667 51 5 0.6416667 19 1 0.8514286 38 5 1.0000000 11 0 1.0000000 5 0 0.7730609 97 5 0.6904762 47 5 0.7080577 118 5 0.537500 30 4 0.913636 51 4 0.6917083 64 5 0.807692 19 1 0.8750000 48 5 0.8021978 66 5 0.596429 38 5 0.6666667 9 1 0.829365 58 5 0.8331391 74 5 0.7358720 86 5 0.8335599 178 5 0.408103 72 5 0.511111 25 1 0.609778 118 5 0.760000 25 4 0.824706 35 3 0.8049206 75 5 0.8002339 93 5 0.857180 126 5 0.7700000 93 5 0.85757576 57 5 0.8632479 121 5 0.805682 0.578855 0.662951 0.8794063 0.7898887 0.8479058 0.818182 0.8356911 0.5981302 0.635065 0.796211 0.9523810 0.7972583 0.641234 0.8604824 1.0000000 1.0000000 0.786178 0.835498 0.7554692 0.854545 0.92532468 0.716608 0.9580420 0.8788961 0.8081918 0.7477737 NA 0.809215 0.8162898 0.7548752 0.847300 0.5837098 0.5281385 0.6299567 0.7575758 0.828495 0.8316327 0.8210071 0.8662733 0.7889610 0.8518300 0.882784 0 0.768781 0.808599 -0.04373161 5 0.608498 0.6396779 -0.03118002 0.9289543 4.4434e-02 weaklyHypometh 1 1.0000000 insignificant 0.8756563 0.449907 insignificant 1 1 insignificant -0.00077675 0.986806 lowCoverage 1 lowCoverage 0.770973 0.6685714 9.9594e-02 5 0.647807 0.474064 0.1737434 1.3452e-03 9.9880e-01 weaklyHypermeth 1.6815e-02 1.0000e+00 weaklyHypermeth 1.1535e-02 9.9791e-01 weaklyHypermeth 1.6479e-01 1.00000000 insignificant 0.1063507 2.0770e-01 lowCoverage 1.0000e+00 lowCoverage 0.7736486 0.824490 -0.06807079 5 0.7602632 0.829801 -0.0695377 9.9740e-01 2.7891e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant 9.8857e-01 1.4034e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.07019375 0.07488083 lowCoverage 1.00000 lowCoverage 0.811715 0.6685714 0.14453224 5 0.6953461 0.474064 0.2212824 1.6436e-04 9.9988e-01 weaklyHypermeth 2.4532e-03 1.0000e+00 weaklyHypermeth 1.0182e-02 9.9997e-01 weaklyHypermeth 1.3905e-01 1.00000000 insignificant 0.1071275 2.0635e-01 lowCoverage 1.0000e+00 lowCoverage 0.814607 0.824490 -0.02346306 5 0.8068179 0.829801 -0.0229830 8.1211e-01 2.2422e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.1040e-01 5.5686e-01 insignificant 1.000000 1.0000e+00 insignificant -0.0694170 0.08991957 lowCoverage 1.00000 lowCoverage 0.6724138 0.824490 -0.1663161 5 0.6636892 0.829801 -0.16611172 0.9999709 5.4006e-04 weaklyHypometh 1.00000 9.6440e-03 weaklyHypometh 0.99831906 5.5293e-03 weaklyHypometh 1.00000 1.0433e-01 insignificant -0.1765445 5.2245e-02 lowCoverage 0.79158536 lowCoverage chr10 29460550 29461550 35679 ENSG00000216946 0.7285354 71 3 0.7105392 112 6 0.7611111 38 3 0.88600784 102 5 1.0000000 14 0 0.844462 97 6 0.8076190 25 3 0.9081077 75 6 0.6222222 32 4 0.833333 15 1 0.830725 152 6 0.0000000 4 0 0.9482668 105 6 0.9666667 31 4 0.7500000 10 0 1.0000000 2 0 0.0000000 2 0 0.8151599 85 6 0.9029101 55 3 0.9239418 81 6 0.933333 36 4 0.714683 25 2 0.7251462 46 2 0.712037 65 6 0.9154589 57 2 0.9584239 164 6 0.766026 56 6 0.7500000 14 0 0.820602 76 6 0.9398027 203 6 0.9514708 165 6 0.8704305 84 6 0.880037 75 5 0.804762 75 6 0.500000 80 2 0.928571 40 2 0.600993 75 6 0.8710012 113 6 0.8022774 70 5 0.901389 55 6 0.8259747 70 6 0.41666667 12 0 0.7330065 53 5 0.735247 0.740325 0.812281 0.9004046 0.9882812 0.8913817 0.796301 0.9572952 0.6464912 0.807018 0.853303 0.3764193 0.9335886 0.994737 0.8858048 0.9436479 NA 0.842577 0.950084 0.9483083 0.989474 0.76196742 0.833795 0.8391813 0.8993135 0.9557494 0.7967949 0.7631579 0.834586 0.9304245 0.9570038 0.932910 0.8175246 0.8225564 0.4210526 0.8879352 0.611526 0.8257181 0.9434456 0.9197368 0.9329794 0.4276316 0.788080 0 0.809567 0.893037 -0.08223839 6 0.833401 0.8865550 -0.05315417 0.7973706 4.3410e-03 weaklyHypometh 1 0.3980858 insignificant 0.4385824 0.235552 insignificant 1 1 insignificant -0.07613741 0.278521 lowCoverage 1 lowCoverage 0.809567 0.6353712 1.5277e-01 6 0.833401 0.741354 0.0920466 1.2679e-03 7.5876e-01 weaklyHypermeth 1.6049e-02 1.0000e+00 weaklyHypermeth 7.8525e-02 7.6834e-01 insignificant 8.0953e-01 1.00000000 insignificant -0.0022471 9.8133e-01 lowCoverage 1.0000e+00 lowCoverage 0.8095668 0.842308 -0.00245433 5 0.8334009 0.815733 0.0176680 4.6355e-01 4.5706e-01 insignificant 1.0000e+00 1.0000000 insignificant 2.9419e-01 6.5899e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.02611754 0.80877697 lowCoverage 1.00000 lowCoverage 0.893037 0.6353712 0.25433462 6 0.8865550 0.741354 0.1452007 1.2955e-04 6.8077e-01 hypermethylated 1.9628e-03 1.0000e+00 hypermethylated 6.3362e-03 3.6263e-01 weaklyHypermeth 9.6004e-02 1.00000000 weaklyHypermeth 0.0738904 3.6693e-01 lowCoverage 1.0000e+00 lowCoverage 0.893037 0.842308 0.05997739 5 0.8865550 0.815733 0.0708222 2.4819e-02 6.4099e-01 weaklyHypermeth 5.7719e-01 1.0000e+00 insignificant 1.1854e-01 4.6052e-01 insignificant 1.000000 1.0000e+00 insignificant 0.1022550 0.30305533 lowCoverage 1.00000 lowCoverage 0.6353712 0.842308 -0.1899591 5 0.7413543 0.815733 -0.07437853 0.7301830 1.0105e-01 insignificant 1.00000 9.0220e-01 insignificant 0.78711317 2.3609e-01 insignificant 1.00000 1.0000e+00 insignificant 0.0283646 8.0269e-01 lowCoverage 1.00000000 lowCoverage chr10 29460650 29461650 35680 ENSG00000216946 0.7285354 71 3 0.7105392 112 6 0.7611111 38 3 0.88600784 102 5 1.0000000 14 0 0.844462 97 6 0.8076190 25 3 0.9081077 75 6 0.6222222 32 4 0.833333 15 1 0.830725 152 6 0.0000000 4 0 0.9482668 105 6 0.9666667 31 4 0.7500000 10 0 1.0000000 2 0 0.0000000 2 0 0.8151599 85 6 0.9029101 55 3 0.9239418 81 6 0.933333 36 4 0.714683 25 2 0.7251462 46 2 0.712037 65 6 0.9154589 57 2 0.9584239 164 6 0.766026 56 6 0.7500000 14 0 0.820602 76 6 0.9398027 203 6 0.9514708 165 6 0.8704305 84 6 0.880037 75 5 0.804762 75 6 0.500000 80 2 0.928571 40 2 0.600993 75 6 0.8710012 113 6 0.8022774 70 5 0.901389 55 6 0.8259747 70 6 0.41666667 12 0 0.7330065 53 5 0.735247 0.740325 0.812281 0.9004046 0.9882812 0.8913817 0.796301 0.9572952 0.6464912 0.807018 0.853303 0.3764193 0.9335886 0.994737 0.8858048 0.9436479 NA 0.842577 0.950084 0.9483083 0.989474 0.76196742 0.833795 0.8391813 0.8993135 0.9557494 0.7967949 0.7631579 0.834586 0.9304245 0.9570038 0.932910 0.8175246 0.8225564 0.4210526 0.8879352 0.611526 0.8257181 0.9434456 0.9197368 0.9329794 0.4276316 0.788080 0 0.809567 0.893037 -0.08223839 6 0.833401 0.8865550 -0.05315417 0.7973706 4.3410e-03 weaklyHypometh 1 0.3980858 insignificant 0.4385824 0.235552 insignificant 1 1 insignificant -0.07613741 0.278521 lowCoverage 1 lowCoverage 0.809567 0.6353712 1.5277e-01 6 0.833401 0.741354 0.0920466 1.2679e-03 7.5876e-01 weaklyHypermeth 1.6049e-02 1.0000e+00 weaklyHypermeth 7.8525e-02 7.6834e-01 insignificant 8.0953e-01 1.00000000 insignificant -0.0022471 9.8133e-01 lowCoverage 1.0000e+00 lowCoverage 0.8095668 0.842308 -0.00245433 5 0.8334009 0.815733 0.0176680 4.6355e-01 4.5706e-01 insignificant 1.0000e+00 1.0000000 insignificant 2.9419e-01 6.5899e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.02611754 0.80877697 lowCoverage 1.00000 lowCoverage 0.893037 0.6353712 0.25433462 6 0.8865550 0.741354 0.1452007 1.2955e-04 6.8077e-01 hypermethylated 1.9628e-03 1.0000e+00 hypermethylated 6.3362e-03 3.6263e-01 weaklyHypermeth 9.6004e-02 1.00000000 weaklyHypermeth 0.0738904 3.6693e-01 lowCoverage 1.0000e+00 lowCoverage 0.893037 0.842308 0.05997739 5 0.8865550 0.815733 0.0708222 2.4819e-02 6.4099e-01 weaklyHypermeth 5.7719e-01 1.0000e+00 insignificant 1.1854e-01 4.6052e-01 insignificant 1.000000 1.0000e+00 insignificant 0.1022550 0.30305533 lowCoverage 1.00000 lowCoverage 0.6353712 0.842308 -0.1899591 5 0.7413543 0.815733 -0.07437853 0.7301830 1.0105e-01 insignificant 1.00000 9.0220e-01 insignificant 0.78711317 2.3609e-01 insignificant 1.00000 1.0000e+00 insignificant 0.0283646 8.0269e-01 lowCoverage 1.00000000 lowCoverage chr10 30086250 30087250 35698 SVIL ENSG00000197321 0.9403674 202 5 0.8237827 338 5 0.8548077 71 5 0.91718174 156 5 0.8576923 110 5 0.947608 326 5 0.9364532 100 5 0.9570076 132 5 0.6823297 89 5 0.933333 36 5 0.877970 365 5 0.8133333 19 2 0.8165631 111 5 0.8076190 39 5 0.9120877 112 5 0.9333333 22 2 NA 0 0 0.6221781 197 5 0.8907656 335 5 0.9199905 362 5 0.903571 57 5 0.860952 55 5 0.9452889 183 5 0.889231 62 5 0.8238889 35 4 0.8828818 282 5 0.875000 112 5 0.9666667 57 5 0.951667 240 5 0.8982004 337 5 0.9208359 302 5 0.9550402 275 5 0.637958 298 5 0.566425 154 5 0.493103 260 5 1.000000 7 0 0.625430 120 5 0.4771651 438 5 0.9400178 359 5 0.960000 201 5 0.8929060 132 5 0.91205074 151 5 0.8711111 182 5 0.939568 0.821562 0.849918 0.9206103 0.8565916 0.9461751 0.937387 0.9518790 0.7078528 0.929094 0.876376 0.8197368 0.7993489 0.793672 0.9124169 0.9276316 NA 0.607196 0.885637 0.9197278 0.909070 0.85084586 0.939669 0.8807692 0.8144737 0.8735254 0.8703454 0.9714912 0.948803 0.8918376 0.9137908 0.956956 0.5973535 0.5463943 0.4365926 1.0000000 0.599226 0.4455687 0.9384320 0.9555556 0.8987565 0.9088684 0.868007 4 0.868033 0.915373 -0.04206233 5 0.874523 0.9196258 -0.04510234 0.9993533 2.2729e-03 weaklyHypometh 1 0.3669525 insignificant 0.9898700 0.035053 weaklyHypometh 1 1 insignificant -0.04060704 0.104393 lowCoverage 1 lowCoverage 0.868033 0.4831637 3.8549e-01 5 0.874523 0.545934 0.3285899 3.0798e-20 8.9928e-01 hypermethylated 1.8116e-18 1.0000e+00 hypermethylated 1.1540e-03 8.4906e-01 weaklyHypermeth 2.3551e-02 1.00000000 weaklyHypermeth 0.2321480 2.9899e-02 lowCoverage 5.0677e-01 lowCoverage 0.8680333 0.916098 -0.05050081 5 0.8745235 0.924121 -0.0495975 9.9559e-01 5.1672e-02 insignificant 1.0000e+00 1.0000000 insignificant 9.6145e-01 1.6441e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.04972217 0.07341511 lowCoverage 1.00000 lowCoverage 0.915373 0.4831637 0.39980084 5 0.9196258 0.545934 0.3736923 1.1098e-20 1.0000e+00 hypermethylated 6.9361e-19 1.0000e+00 hypermethylated 7.5265e-04 9.9886e-01 hypermethylated 1.4758e-02 1.00000000 hypermethylated 0.2727551 1.6870e-02 lowCoverage 3.3079e-01 lowCoverage 0.915373 0.916098 -0.00793753 5 0.9196258 0.924121 -0.0044951 4.2837e-01 5.5198e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.8829e-01 7.1762e-01 insignificant 1.000000 1.0000e+00 insignificant -0.0091151 0.66281307 lowCoverage 1.00000 lowCoverage 0.4831637 0.916098 -0.4563147 5 0.5459335 0.924121 -0.37818742 0.9757707 6.4831e-12 hypomethylated 1.00000 4.3221e-10 hypomethylated 0.90798235 1.7186e-02 weaklyHypometh 1.00000 2.7280e-01 insignificant -0.2818702 1.4579e-02 lowCoverage 0.31692933 lowCoverage chr10 30110450 30111450 35700 SVIL ENSG00000197321 0.7110722 302 11 0.7309174 196 11 0.7810997 155 11 0.75560495 265 12 0.6743015 253 10 0.797919 129 7 0.7579330 204 10 0.7155656 129 9 0.5648148 49 5 0.760570 125 7 0.715817 263 9 0.8252946 104 7 0.8088810 168 11 0.8733171 132 8 0.6787668 123 9 0.6379464 101 8 0.7333463 776 8 0.6815826 311 8 0.7490664 96 5 0.6903409 91 7 0.671795 63 7 0.833333 16 0 0.7637682 302 11 0.840079 96 7 0.8462753 122 7 0.7912611 167 9 0.802967 90 9 0.7873016 42 3 0.840397 167 7 0.7689760 102 6 0.6993682 135 8 0.6802906 128 9 0.705458 184 11 0.639881 118 8 0.672699 183 11 0.797619 20 1 0.682893 161 9 0.7807532 157 9 0.7651514 286 12 0.748300 283 10 0.7655395 312 9 0.86682889 256 8 0.6343023 372 9 0.835157 0.720967 0.786654 0.7880050 0.6639497 0.7901289 0.777257 0.7255683 0.6379310 0.776983 0.785740 0.8298570 0.8314317 0.852638 0.7880597 0.6583641 0.8844450 0.767943 0.694645 0.6995447 0.849808 0.94252874 0.811900 0.8264094 0.8203152 0.8558752 0.7507706 0.7930350 0.841834 0.7619697 0.8028231 0.841991 0.6875786 0.5549398 0.7014137 0.7656461 0.678419 0.7757248 0.8004228 0.8507297 0.7790862 0.8174279 0.809064 3 0.799039 0.813287 -0.02165046 11 0.732509 0.7531752 -0.02066637 0.9428113 7.6574e-02 insignificant 1 1.0000000 insignificant 0.9889721 0.012270 weaklyHypometh 1 1 insignificant -0.04494319 0.071944 insignificant 1 insignificant 0.799039 0.7193196 9.0240e-02 9 0.732509 0.698160 0.0343489 2.1487e-07 9.1919e-01 weaklyHypermeth 4.3812e-06 1.0000e+00 weaklyHypermeth 1.5789e-02 9.2283e-01 weaklyHypermeth 2.1337e-01 1.00000000 insignificant 0.0189908 5.4195e-01 insignificant 1.0000e+00 insignificant 0.7990394 0.817639 -0.01153863 11 0.7325089 0.769722 -0.0372127 9.7012e-01 1.5814e-01 insignificant 1.0000e+00 1.0000000 insignificant 8.9036e-01 1.9979e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.02381659 0.57615002 insignificant 1.00000 insignificant 0.813287 0.7193196 0.10475205 9 0.7531752 0.698160 0.0550153 9.9776e-08 9.9114e-01 weaklyHypermeth 2.2676e-06 1.0000e+00 weaklyHypermeth 3.0631e-04 9.9216e-01 weaklyHypermeth 7.4709e-03 1.00000000 weaklyHypermeth 0.0639339 6.8809e-02 insignificant 9.5607e-01 insignificant 0.813287 0.817639 -0.00028939 11 0.7531752 0.769722 -0.0165463 7.6655e-01 7.7149e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.7213e-01 9.7907e-01 insignificant 1.000000 1.0000e+00 insignificant 0.0211266 0.62626289 insignificant 1.00000 insignificant 0.7193196 0.817639 -0.1028333 9 0.6981600 0.769722 -0.07156162 0.9321631 2.0566e-06 weaklyHypometh 1.00000 7.0918e-05 weaklyHypometh 0.90126981 8.1711e-03 weaklyHypometh 1.00000 1.3619e-01 insignificant -0.0428073 3.7122e-01 insignificant 1.00000000 insignificant chr10 30687250 30688250 35716 ENSG00000188144 0.7299857 172 7 0.7005208 128 6 0.5994318 100 6 0.79124302 167 7 0.6020683 84 6 0.705825 272 7 0.6270353 109 6 0.6245404 160 6 0.7480344 81 6 0.654552 102 6 0.625845 211 6 0.8137037 55 5 0.8569865 154 6 0.5949901 71 6 0.7762736 118 6 0.8560606 27 1 0.7077119 92 3 0.6874143 162 7 0.8166056 139 7 0.6800834 208 7 0.786429 72 6 0.772304 93 5 0.5760359 113 6 0.619048 51 3 0.6105159 56 6 0.6590623 147 7 0.859544 70 6 0.7580247 58 5 0.542227 124 6 0.7023812 190 7 0.6708299 164 7 0.7220570 266 8 0.664409 154 6 0.777826 119 6 0.577766 119 7 0.514286 17 2 0.572108 187 5 0.7692269 178 7 0.6080155 169 7 0.802765 176 7 0.6659928 165 7 0.63705357 118 7 0.7428759 191 7 0.744644 0.650374 0.680262 0.7805709 0.7715142 0.7699158 0.675236 0.7427906 0.7555045 0.821188 0.812135 0.8483333 0.8415772 0.690642 0.7713956 0.7684936 0.8509673 0.687352 0.829693 0.7059812 0.793846 0.70196078 0.746347 0.7274306 0.7571677 0.7224557 0.8380762 0.7171007 0.773293 0.7366605 0.7721384 0.788470 0.6634097 0.7593187 0.6888685 0.5218750 0.621202 0.7082856 0.7359340 0.7966284 0.7343101 0.6848011 0.742226 4 0.769142 0.757123 -0.00606067 6 0.693984 0.7376796 -0.04369518 0.7205863 2.9248e-01 insignificant 1 1.0000000 insignificant 0.4612852 0.409988 insignificant 1 1 insignificant 0.02007415 0.553818 insignificant 1 insignificant 0.769142 0.7093023 4.2566e-02 6 0.693984 0.728414 -0.0344296 2.7926e-03 5.7366e-01 weaklyHypermeth 3.1905e-02 1.0000e+00 weaklyHypermeth 1.5686e-02 8.3342e-01 weaklyHypermeth 2.1337e-01 1.00000000 insignificant 0.0640086 2.3143e-01 insignificant 1.0000e+00 insignificant 0.7694668 0.782662 0.00806556 7 0.7044272 0.628413 0.0760140 2.4902e-01 3.1100e-01 insignificant 1.0000e+00 1.0000000 insignificant 1.2639e-01 3.9216e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.01860510 0.66185210 insignificant 1.00000 insignificant 0.757123 0.7093023 0.04451627 6 0.7376796 0.728414 0.0092656 6.8786e-03 6.4206e-01 weaklyHypermeth 7.3964e-02 1.0000e+00 weaklyHypermeth 3.9187e-02 8.0642e-01 weaklyHypermeth 4.6102e-01 1.00000000 insignificant 0.0439345 4.2470e-01 insignificant 1.0000e+00 insignificant 0.756429 0.782662 0.02006850 6 0.7085329 0.628413 0.0801198 1.3637e-01 5.4138e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.0474e-01 7.5707e-01 insignificant 1.000000 1.0000e+00 insignificant -0.0014691 0.97466846 insignificant 1.00000 insignificant 0.7094682 0.782662 -0.0213887 6 0.7352749 0.628413 0.10686168 0.2393973 2.2520e-02 weaklyHypometh 1.00000 2.4479e-01 insignificant 0.75665346 9.1131e-02 insignificant 1.00000 1.0000e+00 insignificant -0.0454035 4.4938e-01 insignificant 1.00000000 insignificant chr10 30721150 30722150 35718 ENSG00000218543 0.8833846 60 3 0.7564542 213 5 0.7853759 114 3 0.64285714 30 2 0.8240285 108 3 0.890985 78 5 0.5858396 172 3 0.7315723 111 3 0.6400321 135 3 0.930367 137 3 0.885492 232 5 0.8849903 113 3 0.8444619 121 3 1.0000000 6 0 0.9310714 118 3 0.8332420 148 3 0.6013603 2319 5 0.8607018 61 3 0.8795404 187 5 0.6839080 71 3 0.741667 28 3 0.750000 4 0 0.9161404 50 5 0.954762 36 3 0.5000000 3 0 0.9246089 203 5 0.877778 31 2 0.6805556 44 3 0.601346 156 5 0.8504795 155 5 0.9357200 135 4 0.8166164 62 5 0.254740 203 5 0.359722 113 5 0.020270 171 3 0.000000 4 0 0.230769 71 5 0.4660196 228 5 0.6628788 23 2 0.930000 74 4 0.9054054 74 2 0.65263158 42 2 0.9133333 50 3 0.941692 0.820256 0.830188 0.8515337 0.8629947 0.8954926 0.775063 0.8280503 0.7716290 0.935333 0.931295 0.8469073 0.8705068 0.893569 0.9119643 0.7626493 0.7522931 0.763684 0.890590 0.5919540 0.787500 0.88181379 0.931754 0.9371429 0.8235801 0.9373044 0.9388889 0.8125000 0.706333 0.8984540 0.9456378 0.831385 0.2084511 0.1902778 0.1364788 0.1283707 0.192308 0.5160982 0.8847980 0.9650000 0.9333033 0.8263158 0.956667 0 0.605867 0.856670 -0.13647232 5 0.744879 0.8694732 -0.12459389 0.8198439 1.2640e-06 weaklyHypometh 1 0.0012640 weaklyHypometh 0.9282563 0.260462 insignificant 1 1 insignificant 0.00797716 0.873811 lowCoverage 1 lowCoverage 0.605867 0.2468354 4.9275e-01 5 0.744879 0.276431 0.4684478 1.1503e-27 2.2167e-01 hypermethylated 1.0457e-25 1.0000e+00 hypermethylated 2.6485e-08 9.9999e-01 hypermethylated 1.7657e-06 1.00000000 hypermethylated 0.5818630 2.6626e-04 lowCoverage 9.8616e-03 lowCoverage 0.6057798 0.847909 -0.34724323 2 0.6938551 0.891039 -0.1971841 9.9967e-01 1.7085e-06 lowCoverage 1.0000e+00 0.0017085 lowCoverage 9.2479e-01 1.6444e-02 lowCoverage 1.0000000 1.0000e+00 lowCoverage -0.00906658 0.89996446 lowCoverage 1.00000 lowCoverage 0.856670 0.2468354 0.57225572 5 0.8694732 0.276431 0.5930417 1.1244e-21 9.9997e-01 hypermethylated 7.4958e-20 1.0000e+00 hypermethylated 6.1362e-07 1.0000e+00 hypermethylated 3.6095e-05 1.00000000 hypermethylated 0.5738858 1.4042e-04 lowCoverage 5.6168e-03 lowCoverage 0.856512 0.847909 -0.03793487 2 0.8433678 0.891039 -0.0476714 8.5114e-01 4.5239e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.9324e-01 5.9936e-02 lowCoverage 1.000000 1.0000e+00 lowCoverage -0.0170437 0.82828003 lowCoverage 1.00000 lowCoverage 0.2487245 0.847909 -0.3291597 2 0.3317178 0.891039 -0.55932149 0.9999999 4.3112e-09 lowCoverage 1.00000 2.4899e-07 lowCoverage 0.99997831 3.8274e-04 lowCoverage 1.00000 1.4175e-02 lowCoverage -0.5909296 2.0381e-04 lowCoverage 0.02264504 lowCoverage chr10 31463050 31464050 35751 ZNF438 ENSG00000183621 0.0614298 1047 21 0.0319895 1137 26 0.0758670 1046 26 0.03334873 1067 20 0.0447489 790 26 0.053373 1439 27 0.0419205 1304 28 0.0430554 978 29 0.0842794 1154 26 0.042006 949 28 0.053723 1061 28 0.1112985 904 27 0.0365886 923 28 0.0321669 231 8 0.0294305 961 28 0.0598230 885 27 0.0696210 939 21 0.0360038 1230 20 0.0645579 1043 27 0.0144538 1260 26 0.103010 313 26 0.064084 377 16 0.0648849 922 28 0.056270 480 24 0.0583407 399 14 0.0207833 1461 28 0.047774 733 24 0.0536295 399 26 0.051708 996 26 0.0294638 1453 28 0.0506057 1489 27 0.0669703 1275 29 0.044297 989 27 0.099203 1025 27 0.399631 637 24 0.027381 210 14 0.433739 517 21 0.0280066 1506 27 0.0097853 1468 22 0.026752 1368 25 0.0176240 1376 19 0.03234274 1645 23 0.0319562 1277 21 0.053363 0.039733 0.084266 0.0428440 0.0373705 0.0563872 0.050300 0.0562459 0.0499304 0.055091 0.080113 0.1012442 0.0282335 0.053052 0.0372343 0.0755298 0.0450583 0.054316 0.021722 0.0208576 0.070227 0.01804211 0.065296 0.0375188 0.0422461 0.0227086 0.0487332 0.0315153 0.056151 0.0225735 0.0216236 0.072220 0.0409435 0.1223857 0.5818939 0.0894340 0.457151 0.0221594 0.0109561 0.0419805 0.0211178 0.0334929 0.029735 14 0.039424 0.036429 0.00744438 28 0.043971 0.0470547 -0.00308374 0.0482828 9.5622e-01 weaklyHypermeth 1 1.0000000 insignificant 0.0038953 0.988061 weaklyHypermeth 1 1 insignificant -0.00464279 0.553390 insignificant 1 insignificant 0.039518 0.1265356 -8.5973e-02 26 0.060100 0.128457 -0.0683575 9.9980e-01 9.6497e-09 weaklyHypometh 1.0000e+00 4.8249e-06 weaklyHypometh 9.8349e-01 1.4540e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant -0.1210586 1.8268e-01 insignificant 1.0000e+00 insignificant 0.0390737 0.028455 0.01941841 22 0.0390537 0.020995 0.0180583 2.2550e-04 1.0000e+00 weaklyHypermeth 1.2996e-02 1.0000000 weaklyHypermeth 1.9704e-04 9.9998e-01 weaklyHypermeth 0.0328407 1.0000e+00 weaklyHypermeth 0.02729229 0.00087105 weaklyHypermeth 0.10888 insignificant 0.036436 0.1265615 -0.09600465 26 0.0486232 0.132739 -0.0841162 1.0000e+00 1.2500e-05 weaklyHypometh 1.0000e+00 6.2502e-03 weaklyHypometh 9.9998e-01 3.3665e-04 weaklyHypometh 1.0000e+00 0.16832724 insignificant -0.1164158 1.9728e-01 insignificant 1.0000e+00 insignificant 0.034166 0.028459 0.00971201 22 0.0323401 0.021719 0.0106207 4.8461e-02 8.2976e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 9.8867e-02 7.7635e-01 insignificant 1.000000 1.0000e+00 insignificant 0.0319351 0.00060927 weaklyHypermeth 0.11482 insignificant 0.1254112 0.028459 0.1189812 20 0.1227976 0.021719 0.10107815 0.0067620 1.0000e+00 weaklyHypermeth 0.84525 1.0000e+00 insignificant 0.00078799 1.0000e+00 weaklyHypermeth 0.24656 1.0000e+00 insignificant 0.1483509 1.1648e-01 insignificant 1.00000000 insignificant chr10 31486550 31487550 35752 ZNF438 ENSG00000183621 0.8745478 285 5 0.9046023 331 4 0.8810526 82 4 0.97859459 228 5 0.9263492 72 4 0.949117 315 5 0.7727914 42 4 0.9256772 178 4 0.8861715 105 4 0.962963 87 4 0.887083 142 4 0.9261905 38 4 0.9089646 169 4 0.9285714 97 4 0.9040254 213 4 0.9107143 41 4 0.9500000 17 0 0.6637032 339 5 0.7289306 161 5 0.8085844 183 5 0.900000 20 2 0.711813 60 4 0.9546594 141 4 0.764032 82 4 0.9600000 39 4 0.9515780 320 5 0.923849 81 4 0.9440000 93 5 0.904672 178 4 0.9490477 329 5 0.7956085 308 5 0.9383017 227 5 0.075504 268 4 0.000000 40 4 0.287946 281 5 0.680000 75 1 0.254181 262 4 0.2185858 307 5 0.9056423 320 5 0.765827 206 5 0.9067571 321 5 0.92462483 301 5 0.6402244 309 5 0.865356 0.885343 0.873258 0.9648709 0.8909221 0.9577972 0.792832 0.9216314 0.8722114 0.945069 0.891415 0.9197432 0.9009477 0.937400 0.8852790 0.8675762 1.0000000 0.614026 0.857729 0.9571751 0.814607 0.69462897 0.916026 0.9636275 0.9573034 0.9643764 0.9166125 0.9703371 0.908149 0.9123275 0.9677815 0.924893 0.0855969 0.0000000 0.0031601 NA 0.086893 0.0694263 0.8895343 0.8921488 0.9147443 0.8759505 0.586080 4 0.893120 0.931163 -0.03783170 5 0.839304 0.9068921 -0.06758797 0.9982264 2.2090e-02 weaklyHypometh 1 0.8086949 insignificant 0.9255281 0.107395 insignificant 1 1 insignificant -0.00753172 0.807091 lowCoverage 1 lowCoverage 0.893120 0.1404221 7.4608e-01 5 0.839304 0.279311 0.5599934 5.6057e-50 9.9940e-01 hypermethylated 2.8028e-47 1.0000e+00 hypermethylated 1.2541e-09 9.9967e-01 hypermethylated 1.0779e-07 1.00000000 hypermethylated 0.6312287 1.0516e-03 lowCoverage 3.2862e-02 lowCoverage 0.8931200 0.867950 0.05882565 5 0.8393041 0.702306 0.1369980 3.4568e-02 9.6606e-01 weaklyHypermeth 8.2305e-01 1.0000000 insignificant 5.1054e-02 9.9045e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.05531664 0.38470108 lowCoverage 1.00000 lowCoverage 0.931200 0.1411192 0.85036357 5 0.9201932 0.382266 0.5379269 1.8023e-49 1.0000e+00 hypermethylated 9.0114e-47 1.0000e+00 hypermethylated 6.4136e-08 1.0000e+00 hypermethylated 5.3447e-06 1.00000000 hypermethylated 0.6387605 8.6077e-04 lowCoverage 2.8692e-02 lowCoverage 0.930777 0.868222 0.10523747 5 0.8885024 0.776730 0.1117728 1.4014e-03 9.9970e-01 weaklyHypermeth 6.2693e-02 1.0000e+00 weaklyHypermeth 1.4349e-02 9.9998e-01 weaklyHypermeth 0.573962 1.0000e+00 insignificant 0.0628484 0.33978406 lowCoverage 1.00000 lowCoverage 0.1411192 0.868132 -0.6818405 5 0.3822663 0.744834 -0.36256749 0.9995189 1.0072e-16 hypomethylated 1.00000 1.0072e-14 hypomethylated 0.99994996 4.2750e-05 hypomethylated 1.00000 2.6719e-03 hypomethylated -0.5759121 9.3387e-04 lowCoverage 0.04446982 lowCoverage chr10 32083650 32084650 35756 ENSG00000219381 0.2027623 222 5 0.1506131 191 5 0.3344225 125 5 0.23767217 275 5 0.1333761 65 4 0.349921 230 5 0.2425000 95 5 0.2959386 96 5 0.3133324 135 4 0.324429 98 4 0.360581 169 5 0.4259324 54 4 0.0972906 137 4 0.2399798 61 4 0.2387658 112 4 0.2407051 57 4 0.0956944 96 4 0.2658272 246 5 0.1694828 75 4 0.1547036 211 5 0.453361 66 4 0.293083 142 4 0.3238909 134 5 0.220130 40 2 0.2841000 138 5 0.1958201 192 5 0.217612 112 4 0.2448718 57 4 0.329596 130 5 0.1834830 234 5 0.1915060 200 5 0.4323734 239 5 0.021622 172 5 0.033333 76 5 0.200000 125 3 0.462084 82 4 0.196156 145 5 0.2096710 212 5 0.3154683 345 5 0.316318 239 5 0.2809521 280 5 0.12429135 222 4 0.2908773 314 5 0.133986 0.139185 0.252415 0.1781939 0.1096194 0.2495250 0.195905 0.2054510 0.1539180 0.229744 0.271023 0.3139614 0.1107977 0.178752 0.1791484 0.1241349 0.0978682 0.174684 0.109727 0.1008733 0.327513 0.12492360 0.298047 0.1191862 0.1980024 0.1325545 0.2055481 0.1944814 0.303838 0.1182225 0.1480305 0.391295 0.0209483 0.0034602 0.1937716 0.3461270 0.214108 0.2139759 0.2716794 0.2888914 0.1953411 0.1382312 0.179488 4 0.200146 0.230998 -0.03186042 5 0.248120 0.2705876 -0.02246781 0.8978158 1.3133e-01 insignificant 1 1.0000000 insignificant 0.8973149 0.236608 insignificant 1 1 insignificant -0.03712242 0.276372 lowCoverage 1 lowCoverage 0.200146 0.1391626 5.3704e-02 5 0.248120 0.144752 0.1033676 2.8344e-05 1.6148e-01 weaklyHypermeth 4.4287e-04 1.0000e+00 weaklyHypermeth 1.4269e-03 6.0773e-01 weaklyHypermeth 2.8537e-02 1.00000000 weaklyHypermeth 0.0565520 4.3940e-01 lowCoverage 1.0000e+00 lowCoverage 0.2001456 0.268571 -0.04918519 5 0.2481198 0.285191 -0.0370713 5.5316e-01 5.1754e-04 weaklyHypometh 1.0000e+00 0.1035087 insignificant 5.1067e-01 2.4824e-02 weaklyHypometh 1.0000000 1.0000e+00 insignificant -0.02188496 0.61400230 lowCoverage 1.00000 lowCoverage 0.230998 0.1391626 0.08455404 5 0.2705876 0.144752 0.1258354 1.4893e-05 5.0367e-01 weaklyHypermeth 2.5678e-04 1.0000e+00 weaklyHypermeth 1.0683e-03 8.0406e-01 weaklyHypermeth 2.0544e-02 1.00000000 weaklyHypermeth 0.0936744 2.2609e-01 lowCoverage 1.0000e+00 lowCoverage 0.230998 0.268571 -0.00820326 5 0.2705876 0.285191 -0.0146035 4.2431e-01 1.2102e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 2.9306e-01 1.7588e-01 insignificant 1.000000 1.0000e+00 insignificant 0.0152375 0.74051088 lowCoverage 1.00000 lowCoverage 0.1391626 0.268571 -0.1078100 5 0.1447522 0.285191 -0.14043889 0.9799383 1.3653e-03 weaklyHypometh 1.00000 2.2021e-02 weaklyHypometh 0.99040505 3.4497e-02 weaklyHypometh 1.00000 4.6618e-01 insignificant -0.0784370 3.2427e-01 lowCoverage 1.00000000 lowCoverage chr10 32680350 32681350 35773 EPC1 ENSG00000120616 0.7125503 201 8 0.7070000 145 9 0.6226393 137 10 0.70164637 115 8 0.6950000 90 7 0.585892 226 9 0.7362446 142 9 0.7029476 116 7 0.7134872 128 7 0.795618 112 7 0.771924 201 9 0.5536131 80 6 0.6404808 122 9 0.9200000 18 3 0.7613202 123 8 0.6103535 67 6 0.5895952 212 8 0.7218985 147 8 0.6795732 122 6 0.6683120 215 8 0.734832 59 5 0.784859 60 6 0.6174206 132 8 0.801632 78 4 0.6925000 54 6 0.7182635 164 9 0.681938 87 7 0.7857143 50 5 0.741686 95 7 0.6339864 157 9 0.7662424 187 10 0.6753065 295 7 0.742083 144 9 0.612812 80 6 0.587673 159 9 0.612179 48 3 0.672786 61 7 0.6335688 151 9 0.7178128 172 8 0.767257 234 9 0.7521398 157 8 0.61733500 172 8 0.6592623 167 8 0.683337 0.655898 0.564516 0.7081644 0.6649318 0.6311903 0.655646 0.6721728 0.6813578 0.703053 0.725021 0.5526365 0.6640377 0.692785 0.7413253 0.5839154 0.5764249 0.696912 0.626821 0.6183419 0.763763 0.73442376 0.685286 0.7305829 0.6015401 0.7078618 0.6970658 0.7156237 0.672912 0.6114074 0.6852741 0.653915 0.6865777 0.6247954 0.6153071 0.4661410 0.664993 0.5401173 0.7587894 0.7212260 0.7202424 0.6734215 0.711256 5 0.669978 0.691819 -0.01575614 7 0.701791 0.7077735 -0.00598272 0.9069923 1.4722e-01 insignificant 1 1.0000000 insignificant 0.9381722 0.044532 weaklyHypometh 1 1 insignificant -0.02502692 0.336621 insignificant 1 insignificant 0.670099 0.6205288 5.8674e-02 7 0.728901 0.597254 0.1316470 8.6097e-04 9.7319e-01 weaklyHypermeth 1.1329e-02 1.0000e+00 weaklyHypermeth 6.6064e-02 9.8129e-01 insignificant 6.9541e-01 1.00000000 insignificant 0.0509878 1.0953e-01 insignificant 1.0000e+00 insignificant 0.6699779 0.717295 -0.05571389 8 0.7017907 0.718463 -0.0166727 8.8667e-01 3.3560e-03 weaklyHypometh 1.0000e+00 0.3131683 insignificant 9.3128e-01 4.7438e-03 weaklyHypometh 1.0000000 8.6788e-01 insignificant -0.00825665 0.81399642 insignificant 1.00000 insignificant 0.691819 0.6214953 0.07296346 7 0.7077735 0.656979 0.0507944 2.5680e-04 9.8944e-01 weaklyHypermeth 3.7217e-03 1.0000e+00 weaklyHypermeth 3.0318e-03 9.9280e-01 weaklyHypermeth 4.9702e-02 1.00000000 weaklyHypermeth 0.0760147 2.3186e-02 weaklyHypermeth 4.0677e-01 insignificant 0.691819 0.717295 -0.04552945 6 0.7077735 0.718463 -0.0106900 8.5045e-01 2.5629e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 8.7667e-01 1.7864e-01 insignificant 1.000000 1.0000e+00 insignificant 0.0167703 0.62888238 insignificant 1.00000 insignificant 0.6214953 0.717295 -0.1181356 6 0.6569791 0.718463 -0.06148439 0.9871076 7.4713e-04 weaklyHypometh 1.00000 1.3038e-02 weaklyHypometh 0.99629536 7.6146e-03 weaklyHypometh 1.00000 1.2906e-01 insignificant -0.0592444 1.4149e-01 insignificant 1.00000000 insignificant chr10 33334250 33335250 35787 ITGB1 ENSG00000150093 0.0516864 458 14 0.0324985 316 14 0.0267367 313 14 0.04253770 500 10 0.0073956 204 4 0.083564 329 10 0.0234657 288 14 0.0472859 278 14 0.0720861 269 14 0.021713 227 11 0.041040 278 14 0.0517308 361 14 0.0182733 405 14 NA 0 0 0.0277865 362 14 0.0427375 283 8 0.0276081 277 14 0.0460761 548 10 0.0132055 302 14 0.0544814 375 10 0.024634 115 14 0.111733 378 10 0.0714356 413 14 0.041750 134 13 0.1101852 188 10 0.0224648 450 14 0.030555 234 14 0.0138889 120 13 0.032284 225 14 0.0337631 471 14 0.0429829 374 14 0.0612509 517 13 0.028673 363 14 0.158982 246 14 0.091667 161 7 0.000000 112 10 0.000000 81 10 0.0000000 331 14 0.1207404 589 13 0.110129 556 12 0.0323468 616 10 0.02339418 691 10 0.0418861 818 12 0.045990 0.028156 0.018005 0.0538218 0.0013489 0.0939823 0.016219 0.0340309 0.0753219 0.021590 0.052037 0.0534818 0.0172806 NA 0.0252051 0.0402909 0.0228166 0.035308 0.008361 0.0326701 0.016488 0.05870964 0.070094 0.0441335 0.0456884 0.0252361 0.0206503 0.0123978 0.026487 0.0270841 0.0406637 0.032018 0.0225554 0.1616902 0.0408997 0.0023521 0.000000 0.0000000 0.0935614 0.0981706 0.0410320 0.0295372 0.053312 10 0.042366 0.039237 0.00189062 14 0.038213 0.0380368 0.00017599 0.7469994 8.6894e-01 insignificant 1 1.0000000 insignificant 0.9194361 0.849176 insignificant 1 1 insignificant -0.01122244 0.299333 insignificant 1 insignificant 0.042399 0.0471406 -5.4373e-03 14 0.040942 0.048559 -0.0076169 4.1865e-01 6.3787e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 2.5309e-01 9.9634e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0080321 7.7856e-01 insignificant 1.0000e+00 insignificant 0.0423662 0.061468 -0.02347981 10 0.0382128 0.067077 -0.0288638 7.1728e-01 6.8206e-06 weaklyHypometh 1.0000e+00 0.0034103 weaklyHypometh 9.1732e-01 5.9069e-04 weaklyHypometh 1.0000000 2.9534e-01 insignificant -0.02717786 0.26080127 insignificant 1.00000 insignificant 0.039248 0.0471406 -0.00596101 14 0.0407537 0.048559 -0.0078055 4.5376e-01 4.0889e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.8679e-01 9.9328e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0031903 9.1403e-01 insignificant 1.0000e+00 insignificant 0.039237 0.061468 -0.02544127 10 0.0380368 0.067077 -0.0290398 7.1409e-01 3.2320e-04 weaklyHypometh 1.0000e+00 1.1628e-01 insignificant 8.6710e-01 1.9733e-03 weaklyHypometh 1.000000 4.9332e-01 insignificant -0.0159554 0.50856418 insignificant 1.00000 insignificant 0.0471406 0.061487 -0.0329476 10 0.0485592 0.071868 -0.02330859 0.8269599 2.9985e-03 weaklyHypometh 1.00000 4.1075e-02 weaklyHypometh 0.99206732 2.1220e-03 weaklyHypometh 1.00000 5.4950e-02 weaklyHypometh -0.0191457 5.8487e-01 insignificant 1.00000000 insignificant chr10 33592450 33593450 35801 ENSG00000218380 0.8765393 135 7 0.7010393 304 7 0.5924896 92 7 0.86639685 138 6 0.7663265 75 6 0.765348 286 7 0.9043651 79 6 0.9258791 149 7 0.8897959 97 7 0.804762 67 7 0.922729 360 7 0.6000000 28 4 0.8213850 112 7 0.7261905 26 4 0.8499444 106 7 0.7146465 43 4 1.0000000 6 0 0.5837146 181 6 0.8928820 201 7 0.8815734 288 7 0.890079 61 7 0.751701 31 3 0.9048246 131 7 0.851531 92 7 0.7611111 22 3 0.7741470 306 7 0.657178 96 7 0.9166667 22 3 0.813857 199 6 0.8501492 313 7 0.8940503 330 7 0.9267898 333 7 0.233027 227 7 0.480892 115 7 0.562560 310 6 0.000000 17 1 0.461785 175 6 0.2397513 363 7 0.8243042 193 7 0.695336 156 7 0.7111460 70 5 0.73544752 116 6 0.7093537 89 5 0.854835 0.686625 0.595462 0.8757496 0.7344720 0.7642450 0.904448 0.9247631 0.8793996 0.797101 0.915592 0.5942029 0.8190529 0.748189 0.8340501 0.7953562 0.8547263 0.551190 0.900968 0.8857128 0.887882 0.70151829 0.887970 0.8347308 0.7438564 0.7833045 0.6341645 0.9211206 0.814961 0.8578456 0.9056308 0.936203 0.2061732 0.4665970 0.5181067 0.0745360 0.394319 0.2049199 0.8393672 0.6921929 0.7106493 0.7308955 0.732747 2 0.807429 0.855372 -0.05048593 7 0.812816 0.8595424 -0.04672608 0.9977940 1.6891e-02 weaklyHypometh 1 0.7343734 insignificant 0.8816381 0.110483 insignificant 1 1 insignificant -0.02837332 0.435292 insignificant 1 insignificant 0.807429 0.3264292 4.7470e-01 7 0.812816 0.343271 0.4695454 1.6233e-34 1.0000e+00 hypermethylated 2.0292e-32 1.0000e+00 hypermethylated 2.4546e-15 1.0000e+00 hypermethylated 1.2273e-12 1.00000000 hypermethylated 0.4746309 1.8530e-03 weaklyHypermeth 5.2944e-02 weaklyHypermeth 0.8074288 0.740385 0.05410981 7 0.8128163 0.737003 0.0758134 1.2183e-03 9.8850e-01 weaklyHypermeth 4.8734e-02 1.0000000 weaklyHypermeth 5.2686e-02 9.8955e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.06918280 0.06888032 insignificant 1.00000 insignificant 0.855372 0.3264292 0.52027671 7 0.8595424 0.343271 0.5162715 4.9014e-34 1.0000e+00 hypermethylated 9.8029e-32 1.0000e+00 hypermethylated 2.1341e-13 1.0000e+00 hypermethylated 1.0670e-10 1.00000000 hypermethylated 0.5030043 1.4889e-03 weaklyHypermeth 4.8031e-02 weaklyHypermeth 0.855372 0.740385 0.10985393 7 0.8595424 0.737003 0.1225395 1.2036e-06 1.0000e+00 weaklyHypermeth 1.3373e-04 1.0000e+00 weaklyHypermeth 2.6185e-03 9.9997e-01 weaklyHypermeth 0.218212 1.0000e+00 insignificant 0.0975561 0.01254654 weaklyHypermeth 1.00000 insignificant 0.3264292 0.740385 -0.4555117 7 0.3432709 0.737003 -0.39373200 0.9997060 7.6464e-13 hypomethylated 1.00000 6.3720e-11 hypomethylated 0.99999661 2.2654e-08 hypomethylated 1.00000 5.6635e-06 hypomethylated -0.4054481 4.3251e-03 weaklyHypometh 0.12357480 insignificant chr10 35691250 35692250 35855 CCNY ENSG00000108100 0.8510767 653 26 0.8328504 348 24 0.8356815 200 15 0.83758388 571 27 0.7659290 133 10 0.746009 1063 26 0.7849001 129 11 0.8303153 347 23 0.8090540 169 12 0.878646 268 22 0.856573 678 31 0.8542493 98 6 0.8464493 521 29 0.7950358 101 8 0.8538682 281 19 0.7401515 63 4 0.8888889 39 0 0.8444299 635 24 0.8620118 445 30 0.8459320 1031 22 0.777399 251 18 0.831603 365 22 0.8477831 334 22 0.802495 173 14 0.8546530 275 19 0.8257439 447 29 0.754241 398 22 0.7549725 101 7 0.928157 324 20 0.8876755 498 27 0.8437488 477 29 0.8293458 1344 26 0.869995 333 26 0.873671 404 28 0.910888 329 13 0.891534 87 10 0.823967 238 16 0.8517929 332 18 0.8699906 460 24 0.885185 645 25 0.8615499 533 25 0.89764889 443 24 0.8389058 643 25 0.823803 0.762108 0.849284 0.8617279 0.7747047 0.8006289 0.770031 0.8000397 0.8250728 0.869192 0.825176 0.8171333 0.8715939 0.796327 0.8668768 0.7704314 0.8775034 0.834885 0.871357 0.8425846 0.891060 0.86104821 0.885655 0.8410416 0.8946112 0.8429420 0.8146130 0.8473272 0.867284 0.8801655 0.8494849 0.807759 0.8481145 0.8779662 0.8237498 0.9354982 0.844111 0.8762963 0.8586860 0.8560807 0.8781052 0.8856313 0.871484 4 0.856812 0.867255 -0.00775271 26 0.828786 0.7764918 0.05229407 0.7794888 3.1584e-01 insignificant 1 1.0000000 insignificant 0.8715076 0.358184 insignificant 1 1 insignificant -0.00016970 0.992354 insignificant 1 insignificant 0.856867 0.8595473 -1.5959e-02 19 0.833561 0.840679 -0.0071184 4.8064e-01 2.8115e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.6368e-01 2.4873e-03 weaklyHypometh 1.0000e+00 0.89475357 insignificant -0.0423263 1.9052e-02 weaklyHypometh 3.8105e-01 insignificant 0.8571245 0.890235 -0.03864814 25 0.8318772 0.874271 -0.0423942 9.9288e-01 3.4955e-04 weaklyHypometh 1.0000e+00 0.0873865 weaklyHypometh 9.9520e-01 4.4701e-03 weaklyHypometh 1.0000000 8.6788e-01 insignificant -0.04267421 0.00906829 weaklyHypometh 0.50379 insignificant 0.868823 0.8595473 -0.00379209 19 0.8235519 0.840679 -0.0171273 5.1493e-01 2.4730e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.2446e-01 1.3058e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0421566 4.4920e-02 weaklyHypometh 7.0905e-01 insignificant 0.868823 0.890235 -0.02808988 24 0.8235519 0.874271 -0.0507195 8.5235e-01 5.5748e-03 weaklyHypometh 1.0000e+00 6.7494e-01 insignificant 9.5530e-01 1.2372e-01 insignificant 1.000000 1.0000e+00 insignificant -0.0425045 0.03163180 weaklyHypometh 1.00000 insignificant 0.8600465 0.890195 -0.0192153 18 0.8669504 0.870342 -0.00339200 0.5072906 4.1886e-03 weaklyHypometh 1.00000 5.6602e-02 weaklyHypometh 0.39415425 4.0383e-01 insignificant 1.00000 1.0000e+00 insignificant -0.0003479 9.8309e-01 insignificant 1.00000000 insignificant chr10 35775550 35776550 35868 CCNY ENSG00000108100 0.7667095 205 5 0.7320482 90 5 0.7566296 109 5 0.86833333 76 5 0.8350000 37 5 0.777336 163 5 0.7129048 83 5 0.7368067 99 5 0.6818045 72 5 0.825574 87 5 0.814238 155 5 0.7094156 55 5 0.8285126 116 5 NA 0 0 0.7451515 71 5 0.7266667 43 5 0.7098901 43 5 0.7537115 90 5 0.8345963 130 5 0.8365614 143 5 0.566667 17 0 0.817857 30 3 0.7385380 93 5 0.880952 21 3 0.6833333 27 2 0.7678428 165 5 1.000000 26 3 0.6714286 17 2 0.788059 124 5 0.8037626 217 5 0.8205661 165 5 0.7969044 193 5 0.699234 107 5 0.734773 105 5 0.700082 81 5 0.811429 53 5 0.965714 31 2 0.7084439 170 5 0.8253408 176 5 0.831951 204 5 0.8350798 126 5 0.80445987 164 5 0.8497965 135 5 0.812334 0.755098 0.746672 0.8587758 0.8267699 0.8157976 0.766748 0.7893210 0.7351787 0.871170 0.848877 0.7163401 0.8503246 NA 0.7776482 0.7610619 0.7606535 0.801471 0.835163 0.8649930 0.676991 0.84465866 0.774297 0.8245640 0.7131268 0.8024839 1.0000000 0.7212389 0.804470 0.8349825 0.8362866 0.831089 0.7421380 0.7904369 0.7435617 0.8733249 0.950442 0.7523622 0.8576168 0.8673099 0.8719106 0.8469179 0.870057 2 0.790573 0.795434 -0.00812485 5 0.779887 0.7891199 -0.00923290 0.8220097 4.4583e-01 insignificant 1 1.0000000 insignificant 0.7723292 0.499327 insignificant 1 1 insignificant -0.00684042 0.843128 lowCoverage 1 lowCoverage 0.790573 0.7513711 4.2723e-02 5 0.779887 0.731442 0.0484446 1.1628e-02 9.4037e-01 weaklyHypermeth 1.1664e-01 1.0000e+00 insignificant 3.5909e-01 5.2868e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0012062 9.7933e-01 lowCoverage 1.0000e+00 lowCoverage 0.7905731 0.827329 -0.04734474 5 0.7798870 0.828581 -0.0486937 9.9650e-01 1.1627e-02 weaklyHypometh 1.0000e+00 0.6592340 insignificant 9.9529e-01 6.9430e-03 weaklyHypometh 1.0000000 8.6788e-01 insignificant -0.05817339 0.00068826 lowCoverage 0.10412 lowCoverage 0.795434 0.7513711 0.04968015 5 0.7891199 0.731442 0.0576775 5.3815e-03 9.2828e-01 weaklyHypermeth 6.0466e-02 1.0000e+00 weaklyHypermeth 4.2405e-01 6.8472e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0080466 8.8253e-01 lowCoverage 1.0000e+00 lowCoverage 0.795434 0.827329 -0.04024268 5 0.7891199 0.828581 -0.0394608 9.7528e-01 4.4714e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.7106e-01 8.6422e-02 insignificant 1.000000 1.0000e+00 insignificant -0.0513330 0.13839965 lowCoverage 1.00000 lowCoverage 0.7513711 0.827329 -0.0902610 5 0.7314424 0.828581 -0.09713825 0.9999887 1.2478e-04 weaklyHypometh 1.00000 2.5995e-03 weaklyHypometh 0.99802075 3.0402e-02 weaklyHypometh 1.00000 4.2225e-01 insignificant -0.0593796 2.2672e-01 lowCoverage 1.00000000 lowCoverage chr10 35775750 35776750 35869 CCNY ENSG00000108100 0.7667095 205 5 0.7320482 90 5 0.7566296 109 5 0.86833333 76 5 0.8350000 37 5 0.777336 163 5 0.7129048 83 5 0.7368067 99 5 0.6818045 72 5 0.825574 87 5 0.814238 155 5 0.7094156 55 5 0.8285126 116 5 NA 0 0 0.7451515 71 5 0.7266667 43 5 0.7098901 43 5 0.7537115 90 5 0.8345963 130 5 0.8365614 143 5 0.566667 17 0 0.817857 30 3 0.7385380 93 5 0.880952 21 3 0.6833333 27 2 0.7678428 165 5 1.000000 26 3 0.6714286 17 2 0.788059 124 5 0.8037626 217 5 0.8205661 165 5 0.7969044 193 5 0.699234 107 5 0.734773 105 5 0.700082 81 5 0.811429 53 5 0.965714 31 2 0.7084439 170 5 0.8253408 176 5 0.831951 204 5 0.8350798 126 5 0.80445987 164 5 0.8497965 135 5 0.812334 0.755098 0.746672 0.8587758 0.8267699 0.8157976 0.766748 0.7893210 0.7351787 0.871170 0.848877 0.7163401 0.8503246 NA 0.7776482 0.7610619 0.7606535 0.801471 0.835163 0.8649930 0.676991 0.84465866 0.774297 0.8245640 0.7131268 0.8024839 1.0000000 0.7212389 0.804470 0.8349825 0.8362866 0.831089 0.7421380 0.7904369 0.7435617 0.8733249 0.950442 0.7523622 0.8576168 0.8673099 0.8719106 0.8469179 0.870057 2 0.790573 0.795434 -0.00812485 5 0.779887 0.7891199 -0.00923290 0.8220097 4.4583e-01 insignificant 1 1.0000000 insignificant 0.7723292 0.499327 insignificant 1 1 insignificant -0.00684042 0.843128 lowCoverage 1 lowCoverage 0.790573 0.7513711 4.2723e-02 5 0.779887 0.731442 0.0484446 1.1628e-02 9.4037e-01 weaklyHypermeth 1.1664e-01 1.0000e+00 insignificant 3.5909e-01 5.2868e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0012062 9.7933e-01 lowCoverage 1.0000e+00 lowCoverage 0.7905731 0.827329 -0.04734474 5 0.7798870 0.828581 -0.0486937 9.9650e-01 1.1627e-02 weaklyHypometh 1.0000e+00 0.6592340 insignificant 9.9529e-01 6.9430e-03 weaklyHypometh 1.0000000 8.6788e-01 insignificant -0.05817339 0.00068826 lowCoverage 0.10412 lowCoverage 0.795434 0.7513711 0.04968015 5 0.7891199 0.731442 0.0576775 5.3815e-03 9.2828e-01 weaklyHypermeth 6.0466e-02 1.0000e+00 weaklyHypermeth 4.2405e-01 6.8472e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0080466 8.8253e-01 lowCoverage 1.0000e+00 lowCoverage 0.795434 0.827329 -0.04024268 5 0.7891199 0.828581 -0.0394608 9.7528e-01 4.4714e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.7106e-01 8.6422e-02 insignificant 1.000000 1.0000e+00 insignificant -0.0513330 0.13839965 lowCoverage 1.00000 lowCoverage 0.7513711 0.827329 -0.0902610 5 0.7314424 0.828581 -0.09713825 0.9999887 1.2478e-04 weaklyHypometh 1.00000 2.5995e-03 weaklyHypometh 0.99802075 3.0402e-02 weaklyHypometh 1.00000 4.2225e-01 insignificant -0.0593796 2.2672e-01 lowCoverage 1.00000000 lowCoverage chr10 35971950 35972950 35880 FZD8 ENSG00000177283 0.0062645 281 9 0.0031153 263 9 0.0000000 325 9 0.00076104 196 6 0.0000000 176 9 0.070557 312 9 0.0016103 390 9 0.0037037 218 9 0.0000000 285 9 0.000000 249 9 0.022048 407 9 0.0037037 249 9 0.0162408 272 9 NA 0 0 0.0031746 306 9 0.0055556 305 9 0.0027100 264 9 0.0031746 247 5 0.0082693 182 9 0.0320034 355 9 0.000000 51 5 0.000000 107 2 0.0099886 237 9 0.015873 140 9 0.0370370 62 2 0.0064716 445 9 0.015949 163 9 0.0153846 72 5 0.024438 193 9 0.0051477 363 9 0.0000000 307 9 0.0060552 415 9 0.010352 293 9 0.011367 167 9 NA 0 0 0.025000 55 5 0.061404 87 5 0.0027100 359 9 0.0006105 304 9 0.017490 254 9 0.0000000 220 8 0.00060386 254 5 0.1952806 189 5 0.017526 0.014312 0.000000 0.0034963 0.0000000 0.0336573 0.007398 0.0061367 0.0000000 0.000000 0.018067 0.0013947 0.0143372 NA 0.0145846 0.0012552 0.0124503 0.005260 0.011956 0.0209664 0.000000 0.00076075 0.015554 0.0047818 0.0083682 0.0086244 0.0044844 0.0534277 0.023568 0.0165545 0.0000000 0.013111 0.0057954 0.0068196 NA 0.0050209 0.022242 0.0044903 0.0028047 0.0090113 0.0000000 0.0027742 0.046484 2 0.010223 0.010184 0.00009689 9 0.010896 0.0096189 0.00127673 0.2252148 8.7615e-01 insignificant 1 1.0000000 insignificant 0.3303325 0.650735 insignificant 1 1 insignificant -0.00173614 0.733782 insignificant 1 insignificant 0.010223 0.0104058 -4.3181e-05 9 0.010896 0.013695 -0.0027997 3.3204e-01 1.2295e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.9323e-01 3.4524e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0125405 3.1019e-01 insignificant 1.0000e+00 insignificant 0.0102234 0.009009 0.00030344 9 0.0108956 0.014159 -0.0032629 6.0801e-01 5.5731e-01 insignificant 1.0000e+00 1.0000000 insignificant 7.3630e-01 8.1514e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.03317102 0.43616127 insignificant 1.00000 insignificant 0.010184 0.0104058 -0.00026319 9 0.0096189 0.013695 -0.0040764 8.0383e-01 1.8735e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.6549e-01 4.2289e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0108044 3.7029e-01 insignificant 1.0000e+00 insignificant 0.010184 0.009009 0.00060073 9 0.0096189 0.014159 -0.0045397 9.6866e-01 6.6835e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7311e-01 9.1354e-01 insignificant 1.000000 1.0000e+00 insignificant -0.0314349 0.45836248 insignificant 1.00000 insignificant 0.0104058 0.009009 -0.0010864 9 0.0136953 0.014159 -0.00046325 0.8998433 7.0491e-01 insignificant 1.00000 1.0000e+00 insignificant 0.92972026 7.4478e-01 insignificant 1.00000 1.0000e+00 insignificant -0.0206305 6.2706e-01 insignificant 1.00000000 insignificant chr10 36936550 36937550 35892 ENSG00000212148 0.6749154 188 6 0.6131232 163 6 0.5799916 118 6 0.63350912 160 6 0.5691454 304 5 0.677191 387 6 0.6448141 329 6 0.6585359 377 6 0.6681414 327 6 0.526452 305 6 0.690459 461 6 0.7178506 219 4 0.6590814 421 6 0.7000000 19 2 0.7931667 257 5 0.4943537 144 3 0.3943961 171 4 0.7169565 176 6 0.5972988 342 6 0.5382681 341 6 0.534537 55 5 0.634660 130 6 0.6992421 135 6 0.660620 115 5 0.7604105 89 6 0.7454212 208 6 0.666474 109 6 0.6770282 74 6 0.736726 365 6 0.6365672 195 6 0.6655363 224 6 0.5792435 420 6 0.679261 138 6 0.550436 299 6 0.550565 90 6 0.695238 36 3 0.578290 115 5 0.6214431 170 6 0.6446950 153 6 0.658434 166 6 0.5632751 164 6 0.73241977 159 6 0.7879835 132 6 0.696190 0.629810 0.491028 0.6101459 0.5815856 0.6854604 0.556832 0.5975696 0.5726970 0.603274 0.559536 0.5513069 0.6330344 0.620817 0.6173020 0.5537458 0.4561808 0.627827 0.538436 0.6400786 0.566521 0.72784998 0.602456 0.6657216 0.6367131 0.5960339 0.5994930 0.6165367 0.606317 0.6959616 0.6779430 0.662206 0.7032351 0.5305041 0.5309297 0.7381609 0.517901 0.5651130 0.7126108 0.5907934 0.6086846 0.6614968 0.682238 4 0.623152 0.680038 -0.04060780 6 0.604113 0.6513870 -0.04727386 0.9929324 4.4884e-03 weaklyHypometh 1 0.3980858 insignificant 0.9973148 0.023639 weaklyHypometh 1 1 insignificant -0.03898963 0.173863 insignificant 1 insignificant 0.623152 0.6002358 3.4291e-02 6 0.604113 0.622529 -0.0184162 1.9579e-01 8.5971e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.9947e-01 6.5343e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0148436 6.6135e-01 insignificant 1.0000e+00 insignificant 0.6231522 0.662791 -0.04697016 6 0.6041131 0.644463 -0.0403502 9.4491e-01 1.1323e-02 weaklyHypometh 1.0000e+00 0.6592340 insignificant 9.6136e-01 2.9986e-02 weaklyHypometh 1.0000000 1.0000e+00 insignificant -0.04997911 0.29257222 insignificant 1.00000 insignificant 0.680038 0.6002358 0.07516903 6 0.6513870 0.622529 0.0288577 9.7792e-04 9.7255e-01 weaklyHypermeth 1.2700e-02 1.0000e+00 weaklyHypermeth 2.3706e-01 9.6651e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0538332 1.2453e-01 insignificant 1.0000e+00 insignificant 0.680038 0.662791 -0.00745397 6 0.6513870 0.644463 0.0069237 7.4311e-01 3.4712e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.1902e-01 4.4331e-01 insignificant 1.000000 1.0000e+00 insignificant -0.0109895 0.80677941 insignificant 1.00000 insignificant 0.6002358 0.662791 -0.0783870 6 0.6225293 0.644463 -0.02193402 0.9409365 2.1272e-02 weaklyHypometh 1.00000 2.3375e-01 insignificant 0.97425254 4.2117e-01 insignificant 1.00000 1.0000e+00 insignificant -0.0648227 2.0429e-01 insignificant 1.00000000 insignificant chr10 43235550 43236550 35913 ENSG00000221400 0.1595474 1539 35 0.1243978 1355 32 0.0449959 1430 30 0.16135158 1016 32 0.0648587 1063 30 0.228472 1528 35 0.0293764 1586 30 0.0744863 965 30 0.0151857 1376 30 0.072061 1261 30 0.085380 1285 32 0.0596588 1233 30 0.0531023 886 30 0.0045455 239 11 0.0777055 1391 30 0.0199675 1404 30 0.0167719 1311 20 0.2078824 1994 36 0.4206772 1044 32 0.1751562 1560 35 0.080960 437 25 0.122135 422 24 0.1376190 863 32 0.080713 587 30 0.1365889 1134 23 0.1023903 1558 32 0.095225 613 27 0.0341667 252 21 0.090699 1167 30 0.1152127 1539 32 0.0964595 1451 32 0.1230970 1726 34 0.035542 1047 30 0.051428 1090 28 0.087290 813 16 0.084444 254 27 0.161786 467 30 0.0703397 1517 32 0.2058648 1226 35 0.182781 1407 35 0.1366583 1026 33 0.22263496 1709 27 0.1514162 1031 35 0.062954 0.029068 0.024038 0.0364735 0.0340061 0.0860036 0.030480 0.0139048 0.0123405 0.028379 0.040464 0.0280951 0.0231736 0.037868 0.0201144 0.0189068 0.0229434 0.048852 0.399600 0.0543318 0.028825 0.03774691 0.040592 0.0113428 0.0421163 0.0343062 0.0351347 0.0658770 0.033517 0.0337466 0.0412004 0.044072 0.0104923 0.0137612 0.0244634 0.0100926 0.052805 0.0222908 0.1043944 0.0836830 0.0700049 0.0891728 0.060506 21 0.058759 0.050736 0.01329269 32 0.180459 0.1777509 0.00270774 0.1449643 9.9990e-01 insignificant 1 1.0000000 insignificant 0.0091896 0.999956 weaklyHypermeth 1 1 insignificant 0.00350669 0.884134 insignificant 1 insignificant 0.055948 0.0368228 3.1667e-02 32 0.127639 0.120011 0.0076277 6.5622e-04 1.0000e+00 weaklyHypermeth 8.7496e-03 1.0000e+00 weaklyHypermeth 1.4972e-10 1.0000e+00 weaklyHypermeth 1.8715e-08 1.00000000 weaklyHypermeth 0.0229740 4.3134e-01 insignificant 1.0000e+00 insignificant 0.0583491 0.085027 -0.02057840 32 0.1387234 0.165692 -0.0269686 9.9376e-01 9.7696e-04 weaklyHypometh 1.0000e+00 0.1221196 insignificant 9.9970e-01 4.0958e-09 weaklyHypometh 1.0000000 4.0958e-06 weaklyHypometh -0.07509211 0.01322602 weaklyHypometh 0.58769 insignificant 0.049193 0.0368157 0.01934147 32 0.1261237 0.116768 0.0093560 4.9670e-06 1.0000e+00 weaklyHypermeth 9.0308e-05 1.0000e+00 weaklyHypermeth 2.4764e-03 1.0000e+00 weaklyHypermeth 4.1273e-02 1.00000000 weaklyHypermeth 0.0194673 3.5632e-01 insignificant 1.0000e+00 insignificant 0.049962 0.085027 -0.03688894 32 0.1237349 0.165692 -0.0419572 9.9998e-01 7.8334e-24 weaklyHypometh 1.0000e+00 7.8334e-21 weaklyHypometh 9.9980e-01 4.2521e-16 weaklyHypometh 1.000000 4.2521e-13 weaklyHypometh -0.0785988 0.00443644 weaklyHypometh 0.55455 insignificant 0.0362724 0.077887 -0.0552356 32 0.0703152 0.130514 -0.06019832 1.0000000 2.0117e-26 weaklyHypometh 1.00000 1.0059e-23 weaklyHypometh 1.00000000 1.2009e-17 weaklyHypometh 1.00000 1.2009e-14 weaklyHypometh -0.0980661 2.7981e-03 weaklyHypometh 0.09239663 weaklyHypometh chr10 43237650 43238650 35914 ENSG00000221400 0.7799676 407 13 0.8203694 530 13 0.6810603 174 11 0.76789517 282 11 0.8448783 154 10 0.795348 359 14 0.6948864 199 11 0.7891372 214 11 0.8724774 195 12 0.889789 172 12 0.802472 508 15 0.9196429 59 5 0.7503401 259 10 0.7528409 96 7 0.6929534 172 12 0.8600340 84 8 0.7500000 22 0 0.7803893 331 11 0.7884052 327 12 0.8453807 368 11 0.749378 86 9 0.750000 50 2 0.7988651 264 13 0.886971 105 8 0.8088328 91 4 0.7829551 399 13 0.795978 284 13 0.7328947 66 4 0.693042 321 9 0.7792264 462 13 0.7930522 410 13 0.7251690 498 14 0.698770 458 14 0.706536 264 10 0.712462 269 13 0.711111 80 9 0.801133 168 9 0.8195365 330 11 0.7088452 303 13 0.846080 505 14 0.8629717 280 11 0.84919730 356 13 0.8123993 326 13 0.890851 0.857948 0.750515 0.8441920 0.9225100 0.8608156 0.789005 0.8943540 0.8887203 0.896310 0.915875 0.9890873 0.8952623 0.870107 0.9059509 0.8885579 0.7249109 0.879385 0.916230 0.9336975 0.877612 0.89281856 0.927009 0.9137349 0.8202028 0.9257821 0.8544647 0.8387218 0.869551 0.8995578 0.9346363 0.889693 0.8564148 0.8453188 0.8399021 0.8456412 0.859385 0.8849656 0.8980981 0.9528603 0.9513195 0.9042830 0.925253 2 0.879072 0.893281 -0.01255185 11 0.777291 0.7622231 0.01506775 0.6019696 5.9284e-01 insignificant 1 1.0000000 insignificant 0.7565906 0.503366 insignificant 1 1 insignificant 0.01921637 0.356512 insignificant 1 insignificant 0.879072 0.8623327 1.6118e-02 13 0.777291 0.694978 0.0823130 1.4519e-03 8.8608e-01 weaklyHypermeth 1.7925e-02 1.0000e+00 weaklyHypermeth 4.2057e-02 9.1553e-01 weaklyHypermeth 4.7793e-01 1.00000000 insignificant 0.0523218 7.5610e-02 insignificant 1.0000e+00 insignificant 0.8790717 0.916949 -0.04372034 13 0.7772909 0.811624 -0.0343334 9.9520e-01 7.0508e-04 weaklyHypometh 1.0000e+00 0.1036555 insignificant 9.5545e-01 1.2421e-02 weaklyHypometh 1.0000000 1.0000e+00 insignificant -0.02198530 0.51114784 insignificant 1.00000 insignificant 0.893281 0.8623327 0.03146156 11 0.7622231 0.694978 0.0672453 2.1459e-04 9.9088e-01 weaklyHypermeth 3.1557e-03 1.0000e+00 weaklyHypermeth 4.6551e-03 9.9313e-01 weaklyHypermeth 7.2736e-02 1.00000000 weaklyHypermeth 0.0331054 2.3761e-01 insignificant 1.0000e+00 insignificant 0.893281 0.916949 -0.03154786 11 0.7622231 0.811624 -0.0494012 9.9993e-01 1.2146e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9559e-01 2.6307e-01 insignificant 1.000000 1.0000e+00 insignificant -0.0412017 0.23713472 insignificant 1.00000 insignificant 0.8623327 0.916949 -0.0597817 13 0.6949778 0.811624 -0.11664646 0.9999919 3.0238e-07 weaklyHypometh 1.00000 1.3147e-05 weaklyHypometh 0.99718463 1.9922e-03 weaklyHypometh 1.00000 5.3843e-02 weaklyHypometh -0.0743071 7.0303e-02 insignificant 0.92503736 insignificant chr10 44695050 44696050 35938 ENSG00000220202 0.6719113 583 11 0.6366003 450 12 0.7549157 262 11 0.61786090 487 11 0.7473596 159 11 0.774184 619 12 0.7787920 246 11 0.6622776 337 11 0.7159810 400 11 0.699923 272 11 0.810346 498 12 0.6604772 190 12 0.7190507 388 11 0.7559862 159 9 0.6476537 379 11 0.7427579 93 11 0.5751082 54 5 0.6168160 508 11 0.6220692 302 11 0.5260957 618 11 0.660085 111 11 0.683790 250 11 0.7340424 444 12 0.645461 213 10 0.7167371 127 10 0.7334515 440 11 0.630724 257 10 0.6095498 134 9 0.662505 433 11 0.7129042 506 11 0.7919467 458 11 0.8237441 545 11 0.382105 482 11 0.457489 271 11 0.449074 396 9 0.530409 81 6 0.308065 357 11 0.3983653 510 11 0.6056191 587 11 0.742796 441 11 0.5949704 426 11 0.64069337 471 11 0.5250638 499 11 0.700985 0.711026 0.750616 0.6392100 0.7743246 0.7563249 0.840077 0.7171118 0.7305384 0.767344 0.870709 0.7122309 0.7837645 0.743367 0.6676042 0.7155345 0.6077750 0.639903 0.742938 0.5709700 0.780159 0.67381162 0.807693 0.7277914 0.7651080 0.7941853 0.7094734 0.7167296 0.681965 0.7861107 0.8226362 0.804951 0.3436501 0.4531233 0.4199328 0.5537641 0.354269 0.3252776 0.6727810 0.7616626 0.6007529 0.6302708 0.620008 10 0.727584 0.775651 -0.04794091 11 0.706012 0.7102466 -0.00423412 0.8879304 2.3076e-03 weaklyHypometh 1 0.3669525 insignificant 0.9340297 0.298115 insignificant 1 1 insignificant -0.01360348 0.592063 insignificant 1 insignificant 0.727468 0.4215546 3.0037e-01 11 0.664014 0.354820 0.3091943 5.5285e-45 7.6211e-01 hypermethylated 1.1218e-42 1.0000e+00 hypermethylated 1.8484e-13 4.0371e-01 hypermethylated 3.6967e-11 1.00000000 hypermethylated 0.2658905 5.9467e-05 hypermethylated 2.7031e-03 hypermethylated 0.7276626 0.639026 0.06900620 11 0.6766307 0.601834 0.0747970 2.3392e-04 9.8102e-01 weaklyHypermeth 1.2996e-02 1.0000000 weaklyHypermeth 4.5417e-04 9.5399e-01 weaklyHypermeth 0.0567709 1.0000e+00 weaklyHypermeth 0.06497984 0.15052228 insignificant 1.00000 insignificant 0.775307 0.4215546 0.33193109 11 0.6688533 0.354820 0.3140333 2.6094e-41 3.6599e-01 hypermethylated 8.6979e-39 1.0000e+00 hypermethylated 6.7742e-11 5.0771e-01 hypermethylated 1.3548e-08 1.00000000 hypermethylated 0.2794940 3.4610e-05 hypermethylated 1.6481e-03 hypermethylated 0.777436 0.639026 0.12069331 11 0.7138932 0.601834 0.1120595 2.9526e-10 9.6270e-01 weaklyHypermeth 2.9526e-07 1.0000e+00 weaklyHypermeth 2.7865e-05 9.8984e-01 weaklyHypermeth 0.017681 1.0000e+00 weaklyHypermeth 0.0785833 0.09576340 insignificant 1.00000 insignificant 0.4217557 0.639026 -0.2336651 11 0.3821138 0.601834 -0.21971994 0.4266877 9.6844e-17 hypomethylated 1.00000 1.0072e-14 hypomethylated 0.82760767 2.2790e-06 hypomethylated 1.00000 2.5322e-04 hypomethylated -0.2009106 2.4377e-03 weaklyHypometh 0.08706119 weaklyHypometh chr10 44790150 44791150 35945 RASSF4 ENSG00000107551 0.0068083 463 17 0.0069328 571 17 0.0078232 825 17 0.00147059 536 11 0.0072727 168 11 0.019193 605 11 0.0113955 378 11 0.0199194 419 11 0.0041613 628 11 0.011455 626 11 0.020530 233 11 0.0068871 359 11 0.0060667 467 11 0.0083426 182 8 0.0012285 480 11 0.0067627 327 11 0.0017483 284 11 0.0110662 621 11 0.1016192 209 11 0.0039026 499 17 0.018519 97 9 0.012448 478 11 0.0200851 415 17 0.000000 206 11 0.0022624 286 11 0.0044444 706 17 0.011328 334 11 0.0025641 264 11 0.014387 235 11 0.0037822 622 17 0.0053023 614 17 0.0062174 541 11 0.000000 475 17 0.006734 287 11 0.056187 684 17 0.000000 126 10 0.020490 225 11 0.0037330 585 17 0.0066123 792 17 0.030394 431 11 0.0057796 512 11 0.01006311 491 11 0.0095464 606 11 0.014333 0.012919 0.013643 0.0027914 0.0094233 0.0081763 0.013585 0.0199476 0.0050908 0.015551 0.018173 0.0074921 0.0051462 0.011249 0.0015752 0.0077375 0.0022652 0.017940 0.018450 0.0054989 0.018862 0.01594589 0.016809 0.0000000 0.0034284 0.0077273 0.0097673 0.0034765 0.017928 0.0075183 0.0038231 0.012394 0.0000000 0.0076346 0.0013246 0.0000000 0.026639 0.0046201 0.0112473 0.0168019 0.0098401 0.0126777 0.015741 11 0.009910 0.010004 -0.00028035 16 0.014121 0.0073325 0.00678802 0.9128880 8.7908e-01 insignificant 1 1.0000000 insignificant 0.6865287 0.974230 insignificant 1 1 insignificant 0.00478438 0.366246 insignificant 1 insignificant 0.009910 0.0054576 4.1312e-03 16 0.014121 0.029650 -0.0155298 3.5404e-01 9.9942e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.4093e-01 9.9996e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0012947 9.0122e-01 insignificant 1.0000e+00 insignificant 0.0098117 0.014124 -0.00317527 11 0.0073784 0.012733 -0.0053548 7.8315e-01 4.7230e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.3141e-01 5.4052e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.00075023 0.91153545 insignificant 1.00000 insignificant 0.010004 0.0054576 0.00424754 17 0.0073325 0.029650 -0.0223178 6.2598e-01 9.9347e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.2818e-01 9.9791e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0060791 5.3109e-01 insignificant 1.0000e+00 insignificant 0.010031 0.014124 -0.00251572 11 0.0081952 0.012733 -0.0045381 8.9615e-01 9.0813e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7584e-01 7.7245e-01 insignificant 1.000000 1.0000e+00 insignificant -0.0040341 0.44861004 insignificant 1.00000 insignificant 0.0050484 0.014124 -0.0079818 11 0.0037269 0.012733 -0.00900636 0.9999334 2.8829e-02 weaklyHypometh 1.00000 2.9721e-01 insignificant 0.99999185 3.6481e-01 insignificant 1.00000 1.0000e+00 insignificant 0.0020450 8.4333e-01 insignificant 1.00000000 insignificant chr10 46315650 46316650 35968 ENSG00000219320 0.7270095 82 5 0.7666667 50 4 0.9166667 13 1 0.89069264 113 5 1.0000000 27 2 0.747725 60 3 0.7739394 38 3 0.9083333 36 3 0.8533333 18 2 0.666667 8 0 0.830303 74 5 0.9000000 10 0 1.0000000 15 1 0.3750000 6 0 0.8333333 13 1 NA 0 0 NA 0 0 0.7488297 141 3 0.9722222 23 1 0.9214286 44 3 0.982143 26 3 1.000000 4 0 0.7875000 24 1 0.844444 32 5 0.9107143 43 3 0.9333333 49 5 0.800000 10 1 0.5625000 13 0 0.948235 30 2 0.8083333 34 3 0.9616667 84 5 0.9223724 71 5 0.601994 54 5 0.815169 61 5 0.619259 44 3 0.500000 6 0 0.772381 39 4 0.9537500 66 5 0.8438095 74 5 0.971292 90 5 0.9417578 101 5 0.76000000 33 3 0.9351890 162 5 0.962975 0.720588 0.910019 0.9405399 1.0000000 0.9014742 0.848485 0.8995098 0.8627451 0.836489 0.923478 0.8529412 1.0000000 0.689430 1.0000000 NA NA 0.959587 0.901961 0.9012605 0.926471 0.96785410 0.904412 0.8954248 0.9659940 0.9098039 0.9411765 0.8970588 0.953633 0.8259804 0.9887255 0.936716 0.6413366 0.8948816 0.5742919 0.8739496 0.856022 0.9698529 0.9187675 0.9946524 0.9643010 0.9882353 0.956364 0 0.863813 0.902381 -0.03583648 5 0.655611 0.9198027 -0.26419119 0.9948342 1.6032e-01 insignificant 1 1.0000000 insignificant 0.9062380 0.060776 insignificant 1 1 insignificant -0.04776186 0.343800 lowCoverage 1 lowCoverage 0.865885 0.7777778 8.7735e-02 4 0.709325 0.640817 0.0685076 4.7122e-02 9.6844e-01 lowCoverage 4.3989e-01 1.0000e+00 lowCoverage 8.5637e-02 9.9534e-01 lowCoverage 8.7384e-01 1.00000000 lowCoverage 0.1135829 1.7604e-01 lowCoverage 1.0000e+00 lowCoverage 0.8671875 0.941304 -0.05830092 5 0.7648801 0.849282 -0.0844022 9.9648e-01 4.4930e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant 8.4724e-01 4.4849e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.06640127 0.22998213 lowCoverage 1.00000 lowCoverage 0.902148 0.7777778 0.12828047 4 0.9064364 0.640817 0.2656196 2.9877e-02 9.9523e-01 lowCoverage 2.8186e-01 1.0000e+00 lowCoverage 1.0460e-02 9.7406e-01 lowCoverage 1.3946e-01 1.00000000 lowCoverage 0.1613447 6.8837e-02 lowCoverage 9.5607e-01 lowCoverage 0.901679 0.941304 -0.02809125 5 0.9064364 0.849282 0.0571542 9.0318e-01 3.7760e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.8013e-01 7.3878e-01 insignificant 1.000000 1.0000e+00 insignificant -0.0186394 0.72939938 lowCoverage 1.00000 lowCoverage 0.7806691 0.943231 -0.1476882 4 0.7689803 0.919139 -0.15015847 0.9912584 4.0712e-02 lowCoverage 1.00000 3.9914e-01 lowCoverage 0.98577977 2.3068e-02 lowCoverage 1.00000 3.3432e-01 lowCoverage -0.1799841 5.1460e-02 lowCoverage 0.79158536 lowCoverage chr10 49374550 49375550 36024 MAPK8 ENSG00000107643 0.936237 77 4 0.809028 29 4 0.816795 140 5 0.8380952 48 3 0.959157 127 5 0.845241 71 5 0.9102239 192 5 0.941919 54 5 0.884335 145 5 0.914527 135 5 0.920173 179 6 0.9046376 113 5 0.861207 132 5 0.666667 4 0 0.918347 95 5 0.917076 100 5 0.9482517 73 5 0.910000 30 1 0.8836918 127 5 0.920202 88 4 1.000000 64 5 1.000000 8 0 0.866583 91 5 0.892743 59 4 0.916667 16 1 0.8776875 73 6 0.775794 46 5 0.939560 58 5 0.905222 87 5 0.8637413 111 6 0.8273810 56 5 0.972944 64 4 0.8880710 118 5 0.782177 118 5 0.7555556 34 2 0.9000000 18 1 0.9693531 119 5 0.9861111 70 5 0.8057403 121 4 0.943182 32 2 0.9000000 44 4 0.905455 43 3 0.948893 81 6 0.928091 0.818704 0.837077 0.9020737 0.953727 0.864493 0.8986481 0.971896 0.892915 0.915443 0.899391 0.898425 0.873133 NA 0.8982072 0.899580 0.9605233 0.908871 0.8723300 0.924277 1.000000 1.000000 0.848883 0.859488 0.808254 0.8500907 0.842966 0.938408 0.886514 0.9278706 0.8008065 0.969627 0.7950568 0.9135177 0.8781720 0.7813130 0.972358 0.9731183 0.925927 0.904002 0.8859447 0.895894 0.937881 0 0.8892292 0.8922237 -0.00528656 5 0.9222168 0.7952527 0.12696411 0.625924 4.1071e-01 insignificant 1 1.000000 insignificant 0.911924 0.21143105 insignificant 1 1.00000 insignificant -1.7903e-02 0.475126 lowCoverage 1 lowCoverage 0.8891726 0.8805031 0.00812080 5 0.9111049 0.7793881 0.13171678 5.1403e-01 6.2223e-03 inconclusive 1.0000e+00 8.0104e-01 insignificant 8.1316e-01 4.7832e-03 inconclusive 1.0000e+00 9.4141e-01 insignificant 0.0050793 9.0607e-01 lowCoverage 1.0000e+00 lowCoverage 0.8891726 0.9003115 -1.6434e-02 4 0.9111049 0.793670 0.1174351 7.9891e-01 9.1673e-03 lowCoverage 1.0000e+00 7.6394e-01 lowCoverage 7.7896e-01 9.1964e-02 lowCoverage 1.0000e+00 1.000000 lowCoverage -0.01536335 6.2085e-01 lowCoverage 1.0000e+00 lowCoverage 0.8934426 0.8805031 -6.8112e-03 5 0.9088602 0.7793881 1.2947e-01 6.2930e-01 2.4648e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 8.4589e-01 7.3058e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 2.2982e-02 6.1075e-01 lowCoverage 1.0000e+00 lowCoverage 0.8934426 0.9003115 -0.0095764 4 0.9088602 0.793670 0.1151904 9.7141e-01 3.0529e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.4219e-01 4.9209e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 0.00253964 9.3905e-01 lowCoverage 1.00000000 lowCoverage 0.8805031 0.9003115 -0.0025801 4 0.7793881 0.793670 -0.0142816 5.2350e-02 7.7505e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 1.7557e-01 7.6681e-01 lowCoverage 1.00000000 1.0000e+00 lowCoverage -0.0204427 6.7053e-01 lowCoverage 1.0000000 lowCoverage chr10 50053850 50054850 36034 C10orf128 ENSG00000204161 0.956614 92 4 0.966620 196 5 0.927825 111 4 0.8000000 56 4 0.901538 38 2 0.801534 207 4 0.5334928 53 2 0.949828 85 2 0.860577 72 2 0.994186 53 2 0.949942 149 4 0.9285714 19 2 0.986842 49 2 0.957273 38 2 0.882591 71 2 0.500000 11 1 1.0000000 1 0 0.816948 81 2 0.9504098 97 4 0.888889 110 4 0.800000 24 1 1.000000 25 2 0.966330 60 5 0.509615 33 2 0.936111 34 4 0.9383876 191 6 0.870098 29 2 0.976190 45 2 0.994565 68 4 0.9470307 210 5 0.9066152 181 5 0.983051 104 6 0.8754322 148 6 0.777778 35 4 1.0000000 49 3 0.9770115 58 2 0.9250000 88 4 0.8583965 166 6 0.9293367 107 4 0.928889 64 2 0.9500000 80 4 0.682857 48 1 0.960348 79 4 0.908533 0.937587 0.812942 1.0000000 0.890893 0.916761 0.8163944 0.889600 0.956897 0.982625 0.941160 0.963875 0.960678 0.917241 0.9026013 0.747126 0.9495229 0.943591 0.9265122 1.000000 1.000000 1.000000 0.932079 0.509726 0.958493 0.9338576 0.847081 0.975917 0.983758 0.9236623 0.9455646 0.924021 1.0000000 0.7477650 0.9843196 0.9342529 0.924138 0.9209593 0.953700 0.983397 1.0000000 0.935961 0.968801 1 0.9295154 0.9362550 -0.00401024 4 0.7941627 0.8106678 -0.01650507 0.907645 7.2809e-01 lowCoverage 1 1.000000 lowCoverage 0.907857 0.75196996 lowCoverage 1 1.00000 lowCoverage -2.4649e-02 0.626164 lowCoverage 1 lowCoverage 0.9301008 0.9209559 0.00357170 4 0.9265231 0.8957750 0.03074810 3.8399e-01 4.8588e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 3.2361e-01 5.7997e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0245856 5.9748e-01 lowCoverage 1.0000e+00 lowCoverage 0.9285250 0.9470899 -2.4449e-02 4 0.7665231 0.782549 -0.0160258 7.0455e-01 3.2053e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 5.5768e-01 3.9508e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage -0.01260213 8.4110e-01 lowCoverage 1.0000e+00 lowCoverage 0.9371884 0.9209559 1.0786e-02 5 0.9457791 0.8957750 5.0004e-02 1.5008e-01 9.0184e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.2018e-01 8.7499e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.3206e-05 9.9904e-01 lowCoverage 1.0000e+00 lowCoverage 0.9340426 0.9470899 -0.0183403 4 0.7843207 0.782549 0.0017717 5.5564e-01 6.1508e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 6.7462e-01 7.2241e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 0.01204672 8.5797e-01 lowCoverage 1.00000000 lowCoverage 0.9282787 0.9496021 -0.0153589 4 0.9035015 0.939059 -0.0355573 4.4702e-01 3.7046e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 5.5448e-01 4.4874e-01 lowCoverage 1.00000000 1.0000e+00 lowCoverage 0.0119835 8.5236e-01 lowCoverage 1.0000000 lowCoverage chr10 51158350 51159350 36048 AGAP7 ENSG00000204169 0.000000 13 1 0.000000 136 5 0.000000 124 5 0.0000000 9 0 0.000000 166 5 0.080000 17 1 0.0046512 267 5 0.000000 77 5 0.000000 122 5 0.000000 146 5 0.017479 131 5 0.0055556 117 5 0.011765 87 5 NA 0 0 0.000000 43 4 0.019922 221 5 0.0039216 134 5 0.000000 27 3 0.0125000 84 5 0.053333 33 4 0.000000 70 5 0.000000 8 0 0.000000 90 5 0.028571 43 5 0.000000 7 0 0.0102500 231 5 0.000000 18 2 0.000000 26 4 0.032222 59 5 0.0040000 213 5 0.0116162 141 5 0.000000 35 4 0.0068966 97 5 0.014354 112 5 0.0000000 102 3 0.0000000 4 0 0.0200000 36 4 0.0000000 95 5 0.0000000 9 0 0.000000 32 4 0.0000000 2 0 NA 0 0 0.000000 15 0 0.000000 0.000000 0.000000 0.0000000 0.000000 0.162963 0.0094746 0.000000 0.000000 0.000000 0.022533 0.011317 0.010893 NA 0.0000000 0.022803 0.0079884 0.000000 0.0023148 0.071605 0.000000 0.000000 0.000000 0.058201 0.000000 0.0094907 0.000000 0.000000 0.040947 0.0037037 0.0174897 0.000000 0.0140485 0.0124047 0.0000000 NA 0.040741 0.0000000 0.000000 0.000000 NA NA 0.000000 0 0.0081883 0.0085016 -0.00060481 5 0.0071804 0.0076246 -0.00044418 0.683629 5.8564e-01 insignificant 1 1.000000 insignificant 0.656059 0.49214577 insignificant 1 1.00000 insignificant 3.7850e-03 0.525406 lowCoverage 1 lowCoverage 0.0081883 0.0089686 -0.00096582 5 0.0071804 0.0068482 0.00033218 5.6494e-01 5.4132e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.4179e-01 6.3280e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0041316 4.9712e-01 lowCoverage 1.0000e+00 lowCoverage 0.0081883 0.0000000 8.0903e-03 0 0.0071804 0.000000 0.0071804 3.0779e-01 9.5464e-01 noCoverage 1.0000e+00 1.0000e+00 noCoverage 2.4102e-01 9.8459e-01 noCoverage 1.0000e+00 1.000000 noCoverage 0.01100668 3.5393e-02 lowCoverage 9.5658e-01 lowCoverage 0.0085016 0.0089686 -1.0361e-05 5 0.0076246 0.0068482 7.7636e-04 2.1003e-01 4.3012e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.0162e-01 5.2249e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.4655e-04 9.4417e-01 lowCoverage 1.0000e+00 lowCoverage 0.0085016 0.0000000 0.0087378 0 0.0076246 0.000000 0.0076246 2.1263e-01 9.9811e-01 noCoverage 1.0000e+00 1.0000e+00 noCoverage 3.7546e-01 9.9789e-01 noCoverage 1.0000e+00 1.000000 noCoverage 0.00722165 5.4339e-02 lowCoverage 1.00000000 lowCoverage 0.0089686 0.0000000 0.0078537 0 0.0068482 0.000000 0.0068482 6.1927e-01 9.9998e-01 noCoverage 1.0000e+00 1.0000e+00 noCoverage 6.6959e-01 1.0000e+00 noCoverage 1.00000000 1.0000e+00 noCoverage 0.0068751 1.0761e-01 lowCoverage 1.0000000 lowCoverage chr10 51216250 51217250 36050 ENSG00000220508 0.746290 630 15 0.699896 402 14 0.806850 255 14 0.8327028 459 15 0.827732 161 14 0.660485 528 16 0.8111741 230 14 0.809405 234 14 0.770486 154 12 0.836382 196 14 0.771954 530 16 0.6870718 84 11 0.717884 217 14 0.786722 75 8 0.762864 259 15 0.727937 53 4 0.6656943 444 12 0.798344 442 16 0.7766831 315 12 0.757715 492 16 0.777532 149 13 0.738051 112 13 0.661903 331 15 0.669849 148 14 0.818939 85 9 0.7791724 369 15 0.726050 169 11 0.703151 111 11 0.698079 173 14 0.7560563 376 15 0.7831068 339 14 0.762026 603 16 0.7492799 251 14 0.742301 185 14 0.7321074 318 16 0.7915495 117 7 0.7330330 250 15 0.7558436 455 15 0.7236557 641 16 0.778448 608 15 0.8078992 634 15 0.798628 407 15 0.805310 646 15 0.853676 0.786769 0.836433 0.8699353 0.851275 0.804990 0.8397318 0.864494 0.828070 0.864680 0.831749 0.812516 0.830732 0.809335 0.8473921 0.759454 0.7428887 0.789839 0.8210503 0.842436 0.795333 0.771549 0.787728 0.759027 0.863536 0.8367308 0.761159 0.814724 0.801999 0.8593559 0.8704063 0.847930 0.7827517 0.7732319 0.7929450 0.7947096 0.792211 0.7992282 0.854781 0.858513 0.8738145 0.855874 0.863384 5 0.8352273 0.8155143 0.00473833 14 0.6824404 0.7068390 -0.02439861 0.455984 9.6442e-01 insignificant 1 1.000000 insignificant 0.428656 0.87068834 insignificant 1 1.00000 insignificant 2.3220e-02 0.223185 insignificant 1 insignificant 0.8362392 0.7741117 0.05136504 14 0.7784525 0.7183825 0.06006998 1.7718e-03 9.7945e-01 weaklyHypermeth 2.2716e-02 1.0000e+00 weaklyHypermeth 1.5308e-01 8.7383e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0120277 4.3540e-01 insignificant 1.0000e+00 insignificant 0.8357166 0.8739782 -2.5535e-02 15 0.7431397 0.766291 -0.0231514 9.1251e-01 1.0374e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.1311e-01 7.2079e-02 insignificant 1.0000e+00 1.000000 insignificant -0.02007458 3.3635e-01 insignificant 1.0000e+00 insignificant 0.8177189 0.7741117 4.5721e-02 14 0.7605905 0.7183825 4.2208e-02 3.3961e-02 9.3688e-01 weaklyHypermeth 3.5749e-01 1.0000e+00 insignificant 2.2162e-01 8.9037e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -1.1193e-02 5.1210e-01 insignificant 1.0000e+00 insignificant 0.8170443 0.8739782 -0.0317465 14 0.7628648 0.766291 -0.0034263 9.8003e-01 1.1064e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4825e-01 1.1550e-01 insignificant 1.0000e+00 1.000000 insignificant -0.04329503 6.5250e-02 insignificant 1.00000000 insignificant 0.7746032 0.8744884 -0.0816064 14 0.7606403 0.783872 -0.0232316 9.8865e-01 3.1815e-04 weaklyHypometh 1.0000e+00 7.0701e-03 weaklyHypometh 9.0740e-01 3.0735e-03 weaklyHypometh 1.00000000 8.4025e-02 weaklyHypometh -0.0321023 1.2190e-01 insignificant 1.0000000 insignificant chr10 62325350 62326350 36244 CDK1 ENSG00000170312 0.722226 107 5 0.504290 83 5 0.716667 57 5 0.6965801 108 5 0.761574 45 5 0.706573 186 5 0.5332492 51 6 0.676014 118 5 0.657407 24 1 0.636195 59 5 0.683616 145 6 0.8166667 23 4 0.783633 69 6 0.707576 54 5 0.637446 69 5 0.800000 20 2 0.6666667 15 1 0.551285 116 5 0.7755000 88 5 0.717394 130 6 0.480159 31 4 0.782898 53 5 0.735598 65 5 0.551227 40 5 0.713636 53 5 0.6205739 136 5 0.738485 59 5 0.573810 27 3 0.639374 72 6 0.5708772 97 5 0.7155987 98 5 0.723611 177 5 0.6241830 87 5 0.648148 83 5 0.6826708 106 5 0.6400000 13 1 0.6194153 64 5 0.6677595 148 5 0.6597573 117 5 0.661980 120 5 0.6391667 120 5 0.764980 80 5 0.740602 156 5 0.673770 0.515485 0.715188 0.7031507 0.718302 0.650924 0.4498004 0.621729 0.692652 0.570846 0.664971 0.780645 0.740070 0.710899 0.5663490 0.677630 0.5967742 0.622280 0.7772379 0.731077 0.580837 0.730545 0.689238 0.676581 0.716056 0.6509438 0.733688 0.593318 0.578890 0.5732315 0.6611505 0.674550 0.5545014 0.5842294 0.6869974 0.6306452 0.632394 0.6767386 0.693994 0.670067 0.5730242 0.718323 0.745216 2 0.6681557 0.6574890 0.00572538 5 0.6824056 0.6740281 0.00837751 0.591356 7.9096e-01 insignificant 1 1.000000 insignificant 0.446616 0.88462670 insignificant 1 1.00000 insignificant 3.3707e-02 0.322196 lowCoverage 1 lowCoverage 0.6681557 0.6367265 0.03041299 5 0.6824056 0.6866896 -0.00428395 2.3534e-01 7.3174e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.6678e-01 9.1930e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0404985 7.2503e-02 lowCoverage 1.0000e+00 lowCoverage 0.6681557 0.6795953 -1.5101e-02 5 0.6824056 0.692582 -0.0101765 8.3323e-01 4.7107e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.6184e-01 6.1110e-01 insignificant 1.0000e+00 1.000000 insignificant -0.00576918 8.5801e-01 lowCoverage 1.0000e+00 lowCoverage 0.6574890 0.6367265 2.4208e-02 5 0.6740281 0.6866896 -1.2661e-02 1.0141e-01 5.9756e-01 insignificant 9.3896e-01 1.0000e+00 insignificant 2.5154e-01 9.0349e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.7911e-03 8.1865e-01 lowCoverage 1.0000e+00 lowCoverage 0.6574890 0.6795953 -0.0205329 5 0.6740281 0.692582 -0.0185540 9.2170e-01 3.5969e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6916e-01 3.1202e-01 insignificant 1.0000e+00 1.000000 insignificant -0.03947658 3.0494e-01 lowCoverage 1.00000000 lowCoverage 0.6367265 0.6795953 -0.0457452 5 0.6866896 0.692582 -0.0058925 7.5568e-01 2.7777e-02 weaklyHypometh 1.0000e+00 3.7036e-01 insignificant 9.6951e-01 1.4416e-01 insignificant 1.00000000 1.0000e+00 insignificant -0.0462677 1.4235e-01 lowCoverage 1.0000000 lowCoverage chr10 63708150 63709150 36307 RTKN2 ENSG00000182010 0.800005 331 9 0.584700 176 8 0.701838 110 9 0.7816180 211 9 0.512208 100 8 0.735716 858 9 0.6816589 109 9 0.746510 199 9 0.749543 73 8 0.775364 120 9 0.766802 304 9 0.5345679 53 5 0.769928 105 7 0.889091 35 3 0.636826 120 8 0.660205 76 8 0.7959656 77 5 0.765457 265 8 0.6086273 117 8 0.641602 626 9 0.565945 65 7 0.607509 77 7 0.635597 175 8 0.743162 90 7 0.798228 99 8 0.7883920 225 9 0.732253 66 5 0.867965 57 6 0.714071 109 8 0.7841617 230 9 0.7107280 194 9 0.786330 638 9 0.6693681 122 8 0.731904 124 8 0.8004642 204 8 0.7501748 75 7 0.5780417 145 8 0.7525278 223 9 0.8054950 320 9 0.666940 290 8 0.7545769 220 7 0.831718 217 8 0.874168 198 8 0.813433 0.742929 0.722379 0.7874684 0.760611 0.806855 0.6640831 0.788130 0.729731 0.811041 0.787273 0.594872 0.805589 0.830297 0.8288400 0.760990 0.7689510 0.847242 0.7681271 0.826138 0.773335 0.817289 0.695631 0.868014 0.868425 0.8026759 0.797241 0.862129 0.714731 0.7872894 0.7799138 0.835872 0.6639920 0.6849769 0.8015029 0.7597951 0.720429 0.7783425 0.829430 0.803783 0.7960241 0.852901 0.880156 4 0.7982780 0.7925926 0.00403527 9 0.6905426 0.6786078 0.01193484 0.490182 4.3330e-01 insignificant 1 1.000000 insignificant 0.830078 0.21161737 insignificant 1 1.00000 insignificant -2.0950e-02 0.535962 insignificant 1 insignificant 0.7986693 0.7312430 0.06394156 9 0.7004688 0.6470204 0.05344839 2.2570e-03 9.9742e-01 weaklyHypermeth 2.8570e-02 1.0000e+00 weaklyHypermeth 1.3372e-01 8.6507e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0068351 8.6377e-01 insignificant 1.0000e+00 insignificant 0.7998023 0.8136546 -2.1132e-02 8 0.7262690 0.750429 -0.0241599 9.5160e-01 1.2092e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9402e-01 2.2518e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.07966792 9.6177e-02 insignificant 1.0000e+00 insignificant 0.7941613 0.7312430 6.4833e-02 9 0.7351584 0.6470204 8.8138e-02 7.7185e-03 9.9997e-01 weaklyHypermeth 9.7703e-02 1.0000e+00 weaklyHypermeth 5.5147e-02 9.9595e-01 insignificant 6.5651e-01 1.0000e+00 insignificant 1.4115e-02 7.3680e-01 insignificant 1.0000e+00 insignificant 0.7962227 0.8136546 -0.0286886 8 0.7716880 0.750429 0.0212591 9.1689e-01 3.2950e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.1455e-01 4.7417e-01 insignificant 1.0000e+00 1.000000 insignificant -0.05871774 2.1496e-01 insignificant 1.00000000 insignificant 0.7320628 0.8136546 -0.0907386 8 0.7058404 0.750429 -0.0445885 9.9999e-01 2.9202e-03 weaklyHypometh 1.0000e+00 4.9495e-02 weaklyHypometh 9.9855e-01 6.4040e-03 weaklyHypometh 1.00000000 1.4231e-01 insignificant -0.0728328 1.6517e-01 insignificant 1.0000000 insignificant chr10 64983350 64984350 36334 REEP3 ENSG00000165476 0.848911 130 7 0.680495 71 5 0.559184 33 4 0.8728667 134 5 0.921962 76 4 0.833333 32 4 0.6565685 84 5 0.719801 79 8 0.829762 32 4 0.894558 32 4 0.801513 131 7 0.6798701 57 5 0.872224 107 6 0.849206 52 4 0.902098 57 4 0.685606 34 4 0.7576993 53 2 0.757557 142 6 0.6722222 25 1 0.825850 57 7 0.940476 26 2 1.000000 24 3 0.739693 72 4 0.976190 23 2 0.808666 103 5 0.8333333 52 5 0.765278 46 4 0.666667 9 0 0.839583 98 7 0.7872917 95 5 0.9096166 96 7 0.752381 91 7 0.7617716 93 4 0.637415 86 7 0.7506522 105 7 0.6666667 3 0 0.5724359 41 3 0.3755102 42 5 0.8549451 107 7 0.872311 174 7 0.8700017 172 7 0.875837 110 4 0.891408 138 7 0.852163 0.798585 0.710763 0.8951774 0.886718 0.810502 0.7166997 0.687777 0.873288 0.909002 0.817055 0.775529 0.867215 0.879756 0.9182872 0.848467 0.8087019 0.861380 0.7301370 0.837965 0.840183 1.000000 0.845782 0.934889 0.807248 0.9018265 0.750425 0.656841 0.821918 0.7110731 0.8698550 0.735160 0.7296868 0.6565558 0.7566111 0.7236803 0.699772 0.6803583 0.898314 0.913372 0.9045520 0.884426 0.906839 1 0.7966102 0.8419619 -0.00632448 6 0.7313787 0.8191384 -0.08775966 0.615848 1.1894e-01 insignificant 1 1.000000 insignificant 0.989983 0.05495037 insignificant 1 1.00000 insignificant -5.3867e-02 0.161061 lowCoverage 1 lowCoverage 0.7973164 0.7162162 0.10016881 7 0.8082409 0.6613733 0.14686759 4.7397e-03 9.9925e-01 weaklyHypermeth 5.5113e-02 1.0000e+00 weaklyHypermeth 2.6066e-02 9.9597e-01 weaklyHypermeth 3.3852e-01 1.0000e+00 insignificant 0.1536558 4.5316e-02 lowCoverage 6.8661e-01 lowCoverage 0.8001428 0.9015692 -6.1145e-02 7 0.8029814 0.869132 -0.0661504 9.9848e-01 3.9116e-03 weaklyHypometh 1.0000e+00 4.3434e-01 insignificant 9.9829e-01 7.8596e-03 weaklyHypometh 1.0000e+00 0.785958 insignificant -0.09183623 7.1078e-04 lowCoverage 9.3186e-02 lowCoverage 0.8417462 0.7173913 1.1588e-01 6 0.7965307 0.7017166 9.4814e-02 2.0310e-03 9.8925e-01 weaklyHypermeth 2.7446e-02 1.0000e+00 weaklyHypermeth 1.0110e-03 9.9965e-01 weaklyHypermeth 2.3511e-02 1.0000e+00 weaklyHypermeth 2.0752e-01 1.3644e-02 lowCoverage 2.6239e-01 lowCoverage 0.8441379 0.9015692 -0.0602993 6 0.8210351 0.869132 -0.0480967 9.9370e-01 7.8090e-03 weaklyHypometh 1.0000e+00 9.7612e-01 insignificant 8.8117e-01 1.0353e-01 insignificant 1.0000e+00 1.000000 insignificant -0.03796924 2.3305e-01 lowCoverage 1.00000000 lowCoverage 0.7178082 0.9015692 -0.1767325 7 0.7067237 0.869132 -0.1624081 9.9912e-01 4.9440e-05 weaklyHypometh 1.0000e+00 1.4126e-03 weaklyHypometh 9.9939e-01 1.0544e-03 weaklyHypometh 1.00000000 4.2177e-02 weaklyHypometh -0.2454920 8.1097e-03 lowCoverage 0.2252685 lowCoverage chr10 72173650 72174650 36416 ADAMTS14 ENSG00000138316 0.903004 225 7 0.906706 136 7 0.887022 229 7 0.9250312 217 7 0.926173 116 7 0.923032 357 7 0.8934980 170 7 0.836250 228 7 0.871086 216 5 0.989107 179 5 0.914130 217 7 0.9593152 123 7 0.857590 214 5 0.850247 151 5 0.945404 193 5 0.832919 144 5 0.7874113 102 4 0.950860 263 7 0.9313540 180 7 0.925575 259 7 0.928390 95 7 0.883333 93 5 0.924637 160 7 0.755654 117 7 0.936308 68 4 0.9747767 207 7 0.828863 131 7 0.870769 125 5 0.869547 125 7 0.9563452 239 7 0.9366947 202 7 0.938905 242 7 0.9811412 166 7 0.941270 105 6 1.0000000 79 4 0.9206349 19 1 0.9529937 166 7 0.8064016 206 7 0.9218944 225 7 0.964429 222 7 0.7488863 192 7 0.824874 147 6 0.954910 242 7 0.896936 0.868374 0.887588 0.9161282 0.944087 0.931250 0.8956174 0.924874 0.863154 0.976307 0.946342 0.915333 0.945463 0.930336 0.9224277 0.757983 0.8121094 0.917228 0.9357803 0.913366 0.919583 0.888141 0.893591 0.822900 0.877183 0.9519175 0.824885 0.906507 0.859169 0.9713773 0.9256100 0.918510 0.9588693 0.9703086 0.9775421 0.8990941 0.920934 0.7248018 0.926594 0.961835 0.8589370 0.894494 0.942013 5 0.9144972 0.9129712 0.00112997 7 0.8268314 0.8278730 -0.00104161 0.918666 7.6929e-01 insignificant 1 1.000000 insignificant 0.758352 0.87320762 insignificant 1 1.00000 insignificant 4.3387e-04 0.983758 insignificant 1 insignificant 0.9147307 0.9014845 0.01303124 7 0.9301854 0.9294028 0.00078253 4.9480e-01 4.4074e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9597e-01 8.0196e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0329545 3.1115e-01 insignificant 1.0000e+00 insignificant 0.9144754 0.9280156 -1.3683e-02 7 0.8051854 0.810498 -0.0053129 9.0540e-01 5.7875e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.4408e-01 7.3940e-01 insignificant 1.0000e+00 1.000000 insignificant 0.01778693 6.9832e-01 insignificant 1.0000e+00 insignificant 0.9134775 0.9014845 1.4205e-02 7 0.9313572 0.9294028 1.9543e-03 4.6730e-01 6.4480e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7596e-01 8.7525e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -3.3388e-02 3.4020e-01 insignificant 1.0000e+00 insignificant 0.9134295 0.9289192 -0.0139508 7 0.9215510 0.926284 -0.0047327 6.7501e-01 5.2826e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.1344e-01 6.0901e-01 insignificant 1.0000e+00 1.000000 insignificant 0.01735307 7.1607e-01 insignificant 1.00000000 insignificant 0.9013514 0.9289192 -0.0265377 7 0.9193175 0.926284 -0.0069662 7.1779e-01 4.8044e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.4890e-02 9.6082e-01 insignificant 1.00000000 1.0000e+00 insignificant 0.0507414 3.4430e-01 insignificant 1.0000000 insignificant chr10 72664450 72665450 36423 ENSG00000216004 0.736742 106 6 0.621860 111 6 0.527106 87 6 0.5991443 209 6 0.539947 78 6 0.693879 204 6 0.6723928 80 6 0.463104 101 6 0.482226 166 6 0.682722 141 6 0.690294 89 6 0.3252816 108 6 0.418715 210 6 0.608033 92 6 0.447789 91 6 0.752524 95 6 0.1063596 80 6 0.404834 241 6 0.3376623 72 6 0.669307 121 6 0.786402 49 5 0.204179 145 6 0.635015 117 6 0.724639 73 6 0.779518 77 6 0.8313181 139 6 0.651362 93 6 0.459127 54 6 0.572741 118 6 0.8199747 145 6 0.6858585 147 6 0.823495 165 6 0.1634921 121 6 0.011111 80 6 0.0000000 168 6 0.0333333 26 3 0.3320707 59 6 0.0147436 133 6 0.3960967 201 6 0.275146 131 6 0.2516153 148 6 0.130951 187 6 0.437929 199 6 0.738438 0.637584 0.534668 0.6091888 0.560093 0.691673 0.6745105 0.471827 0.491703 0.691652 0.699299 0.333467 0.434113 0.614786 0.4436399 0.759880 0.1120515 0.407125 0.3512574 0.677550 0.799944 0.209250 0.642004 0.713412 0.777085 0.8364346 0.651651 0.462591 0.578619 0.8210102 0.7011490 0.829724 0.1634207 0.0114856 0.0000000 0.0299625 0.336199 0.0150965 0.393794 0.272213 0.2591332 0.134648 0.433614 6 0.5640612 0.6875946 -0.12795978 6 0.5273495 0.6624015 -0.13505205 0.999997 5.0629e-05 weaklyHypometh 1 0.040964 weaklyHypometh 0.999980 0.00015474 weaklyHypometh 1 0.15474 insignificant -1.2547e-01 0.066414 insignificant 1 insignificant 0.5640612 0.0698467 0.46879384 6 0.5273495 0.0689392 0.45841026 1.7698e-27 1.0000e+00 hypermethylated 1.7698e-25 1.0000e+00 hypermethylated 5.4059e-14 1.0000e+00 hypermethylated 1.3515e-11 1.0000e+00 hypermethylated 0.4465378 4.0401e-05 hypermethylated 1.6834e-03 hypermethylated 0.5640612 0.3210162 2.4844e-01 6 0.5273495 0.303232 0.2241172 1.1258e-08 1.0000e+00 hypermethylated 1.6703e-06 1.0000e+00 hypermethylated 2.9471e-07 1.0000e+00 hypermethylated 9.8238e-05 1.000000 hypermethylated 0.24064862 6.3376e-03 weaklyHypermeth 3.5209e-01 insignificant 0.6875946 0.0698467 6.0217e-01 6 0.6624015 0.0689392 5.9346e-01 2.4197e-24 1.0000e+00 hypermethylated 2.1998e-22 1.0000e+00 hypermethylated 4.2615e-13 1.0000e+00 hypermethylated 1.0654e-10 1.0000e+00 hypermethylated 5.7201e-01 3.1510e-06 hypermethylated 1.8535e-04 hypermethylated 0.6875946 0.3210162 0.3750941 6 0.6624015 0.303232 0.3591692 6.0525e-11 1.0000e+00 hypermethylated 1.2105e-08 1.0000e+00 hypermethylated 2.5417e-09 1.0000e+00 hypermethylated 8.4724e-07 1.000000 hypermethylated 0.36612155 4.9643e-04 hypermethylated 0.07091799 hypermethylated 0.0698467 0.3210162 -0.2339622 6 0.0689392 0.303232 -0.2342931 1.0000e+00 2.9443e-07 hypomethylated 1.0000e+00 1.3309e-05 hypomethylated 9.9998e-01 2.3370e-04 hypomethylated 1.00000000 1.1129e-02 hypomethylated -0.2058891 2.5476e-02 weaklyHypometh 0.4904788 insignificant chr10 72977250 72978250 36432 CDH23 ENSG00000107736 0.737036 505 12 0.707461 388 12 0.672663 343 12 0.7996164 521 12 0.844501 153 12 0.799115 661 12 0.7826620 208 12 0.691120 303 12 0.739875 317 12 0.858606 367 10 0.845608 464 12 0.7130357 165 10 0.554993 464 12 0.774766 267 12 0.810257 359 12 0.577628 93 8 0.5762108 56 6 0.557857 811 12 0.7682435 474 12 0.650116 488 12 0.775943 170 12 0.410617 285 8 0.768513 335 12 0.577775 174 11 0.759194 144 12 0.7958039 530 12 0.674033 291 12 0.787952 170 12 0.701095 423 12 0.7610545 538 12 0.5940163 489 12 0.874066 495 12 0.3183668 478 12 0.448956 373 12 0.2524390 435 7 0.0943355 83 8 0.2646655 345 12 0.2756511 667 12 0.3637777 612 12 0.349149 516 12 0.4124982 487 12 0.314693 729 12 0.429163 459 12 0.805997 0.716827 0.701298 0.8100339 0.862199 0.862892 0.8703459 0.790867 0.793620 0.827156 0.855059 0.825705 0.625378 0.766765 0.7968357 0.679350 0.4769088 0.545252 0.7948071 0.710853 0.862300 0.425879 0.810492 0.654675 0.803244 0.8155712 0.700688 0.853981 0.679914 0.7669320 0.6795328 0.909558 0.3444650 0.4518326 0.3413695 0.1149704 0.353617 0.3475359 0.406175 0.416276 0.4554797 0.362277 0.459827 10 0.7483122 0.7407865 0.00601432 12 0.7111529 0.7026357 0.00851714 0.436333 7.5266e-01 insignificant 1 1.000000 insignificant 0.383812 0.73630614 insignificant 1 1.00000 insignificant 1.6397e-02 0.704111 insignificant 1 insignificant 0.7483122 0.2322554 0.48727917 12 0.7111529 0.2919057 0.41924721 2.0636e-56 9.9926e-01 hypermethylated 1.0318e-53 1.0000e+00 hypermethylated 1.0607e-21 9.9999e-01 hypermethylated 1.0607e-18 1.0000e+00 hypermethylated 0.4473329 4.0237e-05 hypermethylated 1.6834e-03 hypermethylated 0.7483122 0.3950749 3.3735e-01 12 0.7111529 0.343972 0.3671812 1.2578e-41 9.9961e-01 hypermethylated 1.2578e-38 1.0000e+00 hypermethylated 4.6270e-21 9.9979e-01 hypermethylated 4.6270e-18 1.000000 hypermethylated 0.34921223 1.5104e-08 hypermethylated 1.5104e-05 hypermethylated 0.7407865 0.2322554 4.8307e-01 12 0.7026357 0.2919057 4.1073e-01 9.1636e-34 9.9421e-01 hypermethylated 3.0545e-31 1.0000e+00 hypermethylated 3.5928e-17 9.9999e-01 hypermethylated 3.5928e-14 1.0000e+00 hypermethylated 4.3094e-01 1.5313e-05 hypermethylated 6.6578e-04 hypermethylated 0.7406034 0.3952908 0.3238508 12 0.6524475 0.390831 0.2616166 4.0873e-23 9.9308e-01 hypermethylated 4.0873e-20 1.0000e+00 hypermethylated 1.6792e-14 9.9365e-01 hypermethylated 1.6792e-11 1.000000 hypermethylated 0.33281561 9.7797e-07 hypermethylated 0.00097797 hypermethylated 0.2322554 0.3950749 -0.1371421 12 0.2919057 0.343972 -0.0520660 9.8210e-01 5.7773e-06 weaklyHypometh 1.0000e+00 2.0633e-04 weaklyHypometh 9.8987e-01 2.7961e-05 weaklyHypometh 1.00000000 2.1509e-03 weaklyHypometh -0.0981206 9.7477e-02 insignificant 1.0000000 insignificant chr10 73087550 73088550 36440 CDH23 ENSG00000107736 0.300290 90 7 0.289216 183 9 0.412492 252 9 0.3434343 45 3 0.234558 184 9 0.352965 246 8 0.3712727 287 9 0.241285 227 8 0.263699 231 8 0.393840 215 7 0.368569 226 9 0.3622402 196 9 0.268415 234 8 0.056000 87 5 0.328646 239 9 0.306897 139 8 0.3692396 168 9 0.416887 85 7 0.6025298 142 4 0.323966 287 9 0.326094 70 7 0.246121 112 5 0.315463 137 7 0.326960 69 7 0.348214 24 3 0.3811443 368 9 0.272232 80 8 0.422523 78 6 0.305762 122 4 0.3176950 248 8 0.3421687 335 9 0.417120 258 9 0.6352438 274 9 0.787846 142 4 0.6663575 132 3 0.6041667 16 0 0.8810273 122 7 0.6767405 315 7 0.3717172 49 5 0.516774 99 9 0.2500000 27 0 0.218519 34 2 0.410774 49 3 0.242665 0.252451 0.379922 0.1939394 0.229161 0.321407 0.3330286 0.243011 0.260049 0.334501 0.329931 0.312993 0.281415 0.288487 0.2985618 0.249336 0.3079814 0.355075 0.4381738 0.295149 0.308788 0.172961 0.302148 0.263817 0.401494 0.3569222 0.290498 0.435751 0.331745 0.3375023 0.2993143 0.404169 0.7338548 0.7997202 0.5905911 0.6814815 0.879370 0.6641937 0.329933 0.471347 0.2250000 0.321852 0.383165 0 0.3789530 0.4218832 -0.03562016 9 0.3388281 0.3624207 -0.02359263 0.974789 5.4380e-03 weaklyHypometh 1 0.776852 insignificant 0.800042 0.10098449 insignificant 1 1.00000 insignificant -4.8028e-03 0.863100 insignificant 1 insignificant 0.3789530 0.8011988 -0.31332026 7 0.3388281 0.7042087 -0.36538058 9.9971e-01 9.6729e-51 hypomethylated 1.0000e+00 9.6729e-48 hypomethylated 1.0000e+00 4.1176e-11 hypomethylated 1.0000e+00 2.0588e-08 hypomethylated -0.3782416 4.8857e-05 hypomethylated 1.9543e-03 hypomethylated 0.3789530 0.4573643 -2.8818e-02 5 0.3388281 0.390057 -0.0512286 5.5139e-01 1.3701e-05 weaklyHypometh 1.0000e+00 2.7988e-03 weaklyHypometh 2.3099e-01 5.7691e-02 insignificant 1.0000e+00 1.000000 insignificant -0.02323472 7.0893e-01 lowCoverage 1.0000e+00 lowCoverage 0.4218832 0.8011988 -2.8266e-01 7 0.3624207 0.7042087 -3.4179e-01 9.9994e-01 1.7564e-29 hypomethylated 1.0000e+00 1.7564e-26 hypomethylated 1.0000e+00 1.9678e-09 hypomethylated 1.0000e+00 9.8391e-07 hypomethylated -3.7344e-01 1.3793e-04 hypomethylated 5.5170e-03 hypomethylated 0.4218832 0.4573643 0.0099762 5 0.3624207 0.390057 -0.0276360 2.0053e-01 2.4403e-02 inconclusive 1.0000e+00 1.0000e+00 insignificant 2.8172e-01 4.6490e-01 insignificant 1.0000e+00 1.000000 insignificant -0.01843193 7.5837e-01 lowCoverage 1.00000000 lowCoverage 0.8011988 0.4573643 0.3159634 5 0.7042087 0.390057 0.3141520 5.4107e-12 1.0000e+00 hypermethylated 2.7054e-09 1.0000e+00 hypermethylated 8.4759e-06 1.0000e+00 hypermethylated 0.00423794 1.0000e+00 hypermethylated 0.3550069 8.9016e-04 lowCoverage 0.0404618 lowCoverage chr10 73195350 73196350 36447 C10orf105 ENSG00000214688 0.918036 183 5 0.856131 91 5 0.804874 152 5 0.9274812 212 5 0.858333 58 4 0.861577 259 5 0.8891557 123 5 0.865526 97 5 0.916485 109 5 0.885548 101 5 0.869092 127 5 0.8847619 57 4 0.893297 134 5 NA 0 0 0.890698 88 5 0.719231 39 1 0.8016112 68 5 0.799964 221 5 0.9339496 73 4 0.845032 309 5 0.855700 53 5 0.709169 103 5 0.871610 157 5 0.931818 69 5 0.895899 63 4 0.8533644 133 5 0.819061 82 5 0.744997 79 5 0.743904 76 5 0.9441961 162 5 0.9196429 94 5 0.857661 325 5 0.5490873 132 5 0.673636 54 5 0.7500000 50 3 0.4200280 35 4 0.8379791 80 5 0.7255735 133 5 0.7964610 174 5 0.858177 216 5 0.8072459 159 4 0.793659 229 5 0.793238 188 5 0.912265 0.837226 0.837201 0.9127904 0.900526 0.886017 0.9234432 0.885958 0.890358 0.914807 0.868713 0.885199 0.913921 NA 0.9052134 0.747834 0.8126502 0.826114 0.9276630 0.844739 0.825689 0.749142 0.860159 0.918475 0.874960 0.8685254 0.867302 0.798024 0.768711 0.9369954 0.9177124 0.875804 0.6216660 0.7735121 0.4901298 0.4662825 0.877013 0.7932518 0.796917 0.866833 0.8322892 0.804005 0.846621 4 0.8748501 0.8667622 0.00778519 5 0.8625307 0.8535292 0.00900147 0.580264 7.8389e-01 insignificant 1 1.000000 insignificant 0.391234 0.76302873 insignificant 1 1.00000 insignificant 1.8667e-02 0.472905 lowCoverage 1 lowCoverage 0.8748501 0.6280992 0.23808199 5 0.8625307 0.6412841 0.22124662 5.9670e-10 1.0000e+00 hypermethylated 1.4917e-08 1.0000e+00 hypermethylated 1.3127e-02 9.9329e-01 weaklyHypermeth 1.8753e-01 1.0000e+00 insignificant 0.2048677 2.0141e-02 lowCoverage 3.5966e-01 lowCoverage 0.8748501 0.7991718 5.5714e-02 5 0.8625307 0.810054 0.0524771 7.1089e-04 8.3785e-01 weaklyHypermeth 3.2313e-02 1.0000e+00 weaklyHypermeth 2.3312e-03 9.1832e-01 weaklyHypermeth 1.2270e-01 1.000000 insignificant 0.05449571 7.9242e-03 lowCoverage 4.1706e-01 lowCoverage 0.8667622 0.6280992 2.2872e-01 5 0.8535292 0.6412841 2.1225e-01 4.7152e-06 9.9998e-01 hypermethylated 1.0203e-04 1.0000e+00 hypermethylated 3.4384e-02 9.9211e-01 weaklyHypermeth 4.6465e-01 1.0000e+00 insignificant 1.8620e-01 2.7872e-02 lowCoverage 4.5691e-01 lowCoverage 0.8667622 0.7991718 0.0436694 5 0.8535292 0.810054 0.0434756 9.1598e-02 7.9674e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.7425e-01 8.8210e-01 insignificant 1.0000e+00 1.000000 insignificant 0.03582908 1.8118e-01 lowCoverage 1.00000000 lowCoverage 0.6280992 0.7991718 -0.1817972 5 0.6412841 0.810054 -0.1687696 9.9861e-01 3.2340e-03 weaklyHypometh 1.0000e+00 5.2161e-02 weaklyHypometh 9.8876e-01 1.2505e-01 insignificant 1.00000000 1.0000e+00 insignificant -0.1503720 5.8643e-02 lowCoverage 0.9263653 lowCoverage chr10 73227550 73228550 36448 C10orf54 ENSG00000107738 0.836661 158 5 0.732745 219 5 0.702750 106 5 0.8491127 164 5 0.709153 110 5 0.840275 307 5 0.7288412 201 5 0.788421 107 5 0.800505 134 5 0.925926 61 3 0.838993 246 5 0.6933289 64 5 0.821868 145 5 0.770292 38 4 0.904675 121 5 0.837576 89 4 0.7619048 28 3 0.774061 171 5 0.8086813 146 5 0.856900 380 5 0.775852 111 5 0.853480 41 3 0.896362 178 5 0.865885 81 4 0.980000 36 3 0.8712041 286 5 0.759951 138 5 0.786739 127 5 0.838069 269 5 0.8905625 285 5 0.8546484 278 5 0.839081 414 5 0.5851509 297 5 0.466706 122 5 1.0000000 93 3 0.7410714 21 2 0.6298260 191 5 0.6683611 343 5 0.9060950 179 5 0.859219 247 5 0.8819444 68 3 0.772718 227 5 0.856049 186 5 0.863741 0.741022 0.783161 0.8650747 0.767169 0.880770 0.7321069 0.808310 0.849928 0.941504 0.857260 0.694214 0.836406 0.855938 0.8766153 0.812780 0.7715348 0.840521 0.8290473 0.889681 0.854199 0.851420 0.912833 0.842019 0.964596 0.8762199 0.782855 0.797697 0.864583 0.8972939 0.8801289 0.892109 0.6227219 0.4348260 0.9935686 0.6414262 0.662544 0.7069261 0.918448 0.919263 0.8681603 0.850836 0.920626 3 0.8156928 0.8493761 -0.03779548 5 0.8070604 0.8497299 -0.04266947 0.961073 4.7019e-04 weaklyHypometh 1 0.156731 insignificant 0.975160 0.00126099 weaklyHypometh 1 0.43774 insignificant -5.1852e-02 0.030359 lowCoverage 1 lowCoverage 0.8156928 0.6429241 0.16532512 5 0.8070604 0.6463587 0.16070174 1.2988e-08 1.0000e+00 weaklyHypermeth 3.0206e-07 1.0000e+00 weaklyHypermeth 8.5938e-04 9.9914e-01 weaklyHypermeth 1.9097e-02 1.0000e+00 weaklyHypermeth 0.1172811 1.7531e-01 lowCoverage 1.0000e+00 lowCoverage 0.8156928 0.8423374 -3.6655e-02 5 0.8070604 0.837552 -0.0304919 7.8436e-01 1.3569e-02 weaklyHypometh 1.0000e+00 8.4805e-01 insignificant 9.6835e-01 1.9732e-03 weaklyHypometh 1.0000e+00 0.394633 insignificant -0.05607131 7.0863e-02 lowCoverage 1.0000e+00 lowCoverage 0.8493761 0.6429241 2.0493e-01 5 0.8497299 0.6463587 2.0337e-01 1.8189e-11 1.0000e+00 hypermethylated 6.0631e-10 1.0000e+00 hypermethylated 1.8759e-04 1.0000e+00 hypermethylated 5.5172e-03 1.0000e+00 hypermethylated 1.6913e-01 7.0589e-02 lowCoverage 9.8041e-01 lowCoverage 0.8493761 0.8423374 0.0113555 5 0.8497299 0.837552 0.0121776 2.9115e-01 2.6214e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.2742e-01 5.4873e-01 insignificant 1.0000e+00 1.000000 insignificant -0.00421882 8.8501e-01 lowCoverage 1.00000000 lowCoverage 0.6429241 0.8423374 -0.1945185 5 0.6463587 0.837552 -0.1911936 9.9968e-01 4.0645e-06 weaklyHypometh 1.0000e+00 1.5633e-04 weaklyHypometh 9.9908e-01 4.2064e-03 weaklyHypometh 1.00000000 1.0516e-01 insignificant -0.1733524 6.6319e-02 lowCoverage 1.0000000 lowCoverage chr10 73235350 73236350 36449 C10orf54 ENSG00000107738 0.270675 489 12 0.167580 302 12 0.199058 351 12 0.2956178 610 12 0.150992 219 12 0.284359 851 12 0.2018413 390 12 0.443161 296 12 0.342017 531 12 0.357062 513 12 0.283081 371 12 0.4217948 444 12 0.169349 430 12 0.415129 316 12 0.563230 507 12 0.482216 569 12 0.2499154 306 12 0.237271 754 12 0.0315334 162 12 0.402503 600 12 0.400000 166 12 0.146280 532 12 0.237196 268 12 0.211658 138 10 0.487769 265 12 0.2632985 420 12 0.289975 299 12 0.579547 139 13 0.185581 318 12 0.2174293 495 12 0.4033133 332 12 0.595867 453 12 0.0739312 316 12 0.039995 227 12 0.3888889 90 2 0.0460735 157 10 0.0942135 312 13 0.0472363 460 12 0.4320856 675 12 0.127626 651 12 0.0487921 586 12 0.322925 645 12 0.274009 675 12 0.257006 0.095331 0.183230 0.3304184 0.149936 0.155623 0.2189764 0.436005 0.327112 0.287112 0.252397 0.428424 0.175833 0.421360 0.5109620 0.500367 0.2958187 0.219887 0.0359472 0.343527 0.420051 0.098501 0.269974 0.234770 0.523405 0.2655587 0.261208 0.626163 0.191374 0.0969556 0.3825252 0.592047 0.0763656 0.0449814 0.2254654 0.0380197 0.105975 0.0428681 0.497607 0.120954 0.0504451 0.265449 0.219307 12 0.3102874 0.3077929 -0.00277882 12 0.3525063 0.2935558 0.05895048 0.836429 5.8544e-01 insignificant 1 1.000000 insignificant 0.965150 0.12166824 insignificant 1 1.00000 insignificant -3.6407e-02 0.502903 insignificant 1 insignificant 0.3103219 0.0909673 0.21322361 12 0.3760067 0.0797355 0.29627118 5.9576e-18 1.0000e+00 hypermethylated 2.4823e-16 1.0000e+00 hypermethylated 2.7282e-14 1.0000e+00 hypermethylated 9.0941e-12 1.0000e+00 hypermethylated 0.1833629 1.9062e-02 weaklyHypermeth 3.4736e-01 insignificant 0.3103219 0.2484530 5.4317e-02 12 0.3760067 0.279295 0.0967114 2.0858e-01 9.9880e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.8681e-01 9.9924e-01 insignificant 1.0000e+00 1.000000 insignificant 0.05733177 4.7331e-01 insignificant 1.0000e+00 insignificant 0.3078534 0.0909091 2.1777e-01 12 0.3310558 0.0747520 2.5630e-01 2.9808e-11 1.0000e+00 hypermethylated 9.6155e-10 1.0000e+00 hypermethylated 3.9882e-13 1.0000e+00 hypermethylated 1.0654e-10 1.0000e+00 hypermethylated 2.1977e-01 9.9222e-03 weaklyHypermeth 2.0249e-01 insignificant 0.3076722 0.2484530 0.0578810 12 0.2864595 0.279295 0.0071643 2.4763e-01 9.9435e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.0355e-02 9.9995e-01 weaklyHypermeth 7.0748e-01 1.000000 insignificant 0.09373868 2.8696e-01 insignificant 1.00000000 insignificant 0.0909673 0.2484530 -0.1593166 12 0.0797355 0.279295 -0.1995597 1.0000e+00 3.7926e-06 weaklyHypometh 1.0000e+00 1.5421e-04 weaklyHypometh 1.0000e+00 4.5057e-06 weaklyHypometh 1.00000000 5.0813e-04 weaklyHypometh -0.1260311 1.9013e-01 insignificant 1.0000000 insignificant chr10 73318850 73319850 36459 PSAP ENSG00000197746 0.639706 54 3 0.573613 77 5 0.630872 88 5 0.4558442 105 5 0.568871 58 5 0.696061 127 5 0.7093939 55 4 0.530823 81 5 0.640424 60 5 0.488725 39 3 0.637558 114 5 0.4047619 19 3 0.228778 51 3 1.000000 8 0 0.595000 51 3 0.666667 17 3 0.4484127 33 3 0.695935 53 1 0.3877778 40 3 0.474000 113 5 0.585714 33 4 0.509103 62 3 0.617725 57 3 0.673016 33 5 0.496750 73 3 0.5743996 131 5 0.469658 62 5 0.426349 33 3 0.433216 46 4 0.5428805 104 5 0.4903595 120 5 0.623992 150 5 0.5672960 102 5 0.423669 62 3 0.5196639 178 5 0.6047619 60 3 0.5387546 61 5 0.2365967 103 5 0.6661104 87 3 0.609099 67 4 0.4605628 78 5 0.620000 38 1 0.576709 97 5 0.463701 0.386906 0.497439 0.2916324 0.376487 0.447679 0.5294591 0.365560 0.418707 0.356943 0.495245 0.613895 0.243793 0.511134 0.3256329 0.656561 0.4222136 0.452300 0.1725738 0.293671 0.406872 0.279860 0.393376 0.435001 0.290672 0.2998021 0.278102 0.233836 0.296425 0.2790184 0.2558327 0.474969 0.2962763 0.2473312 0.2901819 0.3717628 0.479501 0.1085244 0.409329 0.372483 0.2584498 0.343038 0.344294 1 0.4794851 0.4546460 0.04827567 5 0.5858873 0.5542771 0.03161025 0.117761 8.4790e-01 insignificant 1 1.000000 insignificant 0.044204 0.95373755 weaklyHypermeth 1 1.00000 insignificant 3.6731e-02 0.393413 lowCoverage 1 lowCoverage 0.4794851 0.4204947 0.10871342 5 0.5858873 0.4741649 0.11172242 9.6967e-05 8.7013e-01 weaklyHypermeth 1.4473e-03 1.0000e+00 weaklyHypermeth 8.3246e-03 9.7570e-01 weaklyHypermeth 1.2807e-01 1.0000e+00 insignificant 0.0918708 1.9243e-01 lowCoverage 1.0000e+00 lowCoverage 0.4794851 0.4223433 5.8253e-02 4 0.5858873 0.564174 0.0217135 6.2588e-02 3.5539e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 1.0454e-01 4.4476e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage -0.01283498 8.0023e-01 lowCoverage 1.0000e+00 lowCoverage 0.4546460 0.4204947 5.8524e-02 5 0.5542771 0.4741649 8.0112e-02 1.0535e-03 5.8714e-01 weaklyHypermeth 1.5492e-02 1.0000e+00 weaklyHypermeth 4.1995e-02 6.7204e-01 weaklyHypermeth 5.2494e-01 1.0000e+00 insignificant 5.5140e-02 3.8584e-01 lowCoverage 1.0000e+00 lowCoverage 0.4546460 0.4223433 0.0146737 4 0.5542771 0.564174 -0.0098968 7.0466e-02 9.3057e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 4.4303e-01 1.6134e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage -0.04956586 2.6696e-01 lowCoverage 1.00000000 lowCoverage 0.4204947 0.4223433 -0.1090264 4 0.4741649 0.564174 -0.0900089 8.9504e-01 4.6949e-02 lowCoverage 1.0000e+00 5.6759e-01 lowCoverage 9.8142e-01 7.3080e-02 lowCoverage 1.00000000 1.0000e+00 lowCoverage -0.1047057 1.4485e-01 lowCoverage 1.0000000 lowCoverage chr10 73427950 73428950 36467 CHST3 ENSG00000122863 0.853827 290 6 0.713102 211 9 0.754563 124 8 0.8145382 291 8 0.666032 71 9 0.900376 388 9 0.7245494 105 9 0.812067 159 9 0.774635 157 6 0.899563 151 6 0.761397 267 9 0.6353535 65 5 0.584851 222 6 0.782143 109 5 0.696437 135 6 0.760670 49 6 0.8000000 31 3 0.933379 324 6 0.6350202 99 6 0.777114 247 6 0.744444 96 6 0.765921 131 6 0.685277 188 6 0.823706 121 8 0.741414 88 9 0.7829001 228 9 0.607302 104 6 0.921611 79 6 0.917496 169 6 0.7398078 240 9 0.6384243 249 9 0.871014 300 8 0.3326711 219 8 0.575767 103 8 0.7500000 50 3 0.6083333 75 7 0.5018672 175 8 0.5834952 186 9 0.6993689 243 8 0.778228 238 8 0.7544527 209 7 0.832543 232 6 0.650229 244 8 0.887372 0.825771 0.906619 0.9188036 0.973474 0.901897 0.8614711 0.896470 0.781546 0.911567 0.885997 0.781939 0.867463 0.849318 0.9136423 0.846864 0.8124934 0.913629 0.9419244 0.943102 0.955062 0.899019 0.867129 0.982778 0.996444 0.9091104 0.898279 0.904109 0.922536 0.9357378 0.9252755 0.898171 0.5411840 0.8294386 0.7771733 0.8793333 0.755382 0.8805789 0.854918 0.867525 0.9613802 0.936005 0.720473 6 0.8612303 0.8543446 -0.00292608 8 0.7798309 0.6001900 0.17964092 0.181884 1.7518e-01 insignificant 1 1.000000 insignificant 0.816586 0.06150342 insignificant 1 1.00000 insignificant -5.9623e-03 0.868961 insignificant 1 insignificant 0.8611906 0.5990099 0.19121318 8 0.7578140 0.4590542 0.29875982 3.8171e-14 6.9449e-01 weaklyHypermeth 1.2724e-12 1.0000e+00 weaklyHypermeth 7.1283e-05 9.4818e-01 weaklyHypermeth 2.1601e-03 1.0000e+00 weaklyHypermeth 0.2052919 1.2456e-02 weaklyHypermeth 2.4424e-01 insignificant 0.8613578 0.8413379 2.5264e-02 8 0.7679415 0.757518 0.0104235 8.4128e-02 7.3073e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.1745e-01 7.8625e-01 insignificant 1.0000e+00 1.000000 insignificant 0.02101644 5.9337e-01 insignificant 1.0000e+00 insignificant 0.8547739 0.5990099 1.9459e-01 8 0.6602090 0.4590542 2.0115e-01 1.5642e-09 9.9976e-01 weaklyHypermeth 4.3449e-08 1.0000e+00 weaklyHypermeth 2.3267e-04 9.9997e-01 weaklyHypermeth 6.6478e-03 1.0000e+00 weaklyHypermeth 2.1125e-01 1.0540e-02 weaklyHypermeth 2.1079e-01 insignificant 0.8552036 0.8413379 0.0279239 8 0.7335656 0.757518 -0.0239524 1.1447e-01 7.3166e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.6924e-01 8.5774e-01 insignificant 1.0000e+00 1.000000 insignificant 0.02697873 5.4228e-01 insignificant 1.00000000 insignificant 0.5997522 0.8413379 -0.1708719 8 0.5100602 0.757518 -0.2474577 9.5162e-01 1.3853e-05 weaklyHypometh 1.0000e+00 4.4688e-04 weaklyHypometh 9.7487e-01 2.6665e-03 weaklyHypometh 1.00000000 8.1387e-02 weaklyHypometh -0.1842755 2.1843e-02 weaklyHypometh 0.4854096 insignificant chr10 73446350 73447350 36469 CHST3 ENSG00000122863 0.666832 81 2 0.671855 185 6 0.636389 221 7 0.7913840 99 4 0.824561 112 5 0.856376 203 5 0.6886171 131 5 0.652580 149 5 0.520707 92 3 0.604194 155 5 0.552801 122 2 0.6694444 89 5 0.441379 113 3 0.583333 57 2 0.579162 89 3 0.719227 73 5 0.3939394 22 2 0.848214 102 4 0.4666667 86 2 0.644190 125 3 0.585852 64 3 0.771429 42 2 0.591844 97 5 0.609223 77 5 0.920833 42 3 0.7856186 183 6 0.705051 118 6 0.669312 81 3 0.759402 103 5 0.7041077 206 7 0.7041111 199 7 0.813230 156 6 0.4678633 205 5 0.040909 89 5 0.5640000 121 3 0.4409524 20 2 0.2520947 141 5 0.6710243 167 6 0.5900000 61 2 0.914918 116 4 0.8680737 100 4 0.781404 62 2 0.658658 69 4 0.865020 0.738477 0.693308 0.8135598 0.959184 0.876261 0.7759502 0.808725 0.805710 0.861060 0.873826 0.735374 0.886700 0.813625 0.8813469 0.699435 0.3366316 0.832631 0.9274376 0.881035 0.832175 0.913703 0.928870 0.787769 0.917687 0.8594701 0.887094 0.740417 0.882627 0.9093725 0.9030859 0.906492 0.2799073 0.0163884 0.5043433 0.7129252 0.157871 0.9004480 0.923129 0.912595 0.8327035 0.924335 0.663317 2 0.7636600 0.8311404 -0.05031986 6 0.7029741 0.7407484 -0.03777433 0.995471 1.0637e-03 weaklyHypometh 1 0.212735 insignificant 0.864289 0.00959375 weaklyHypometh 1 1.00000 insignificant -7.7742e-02 0.066097 lowCoverage 1 lowCoverage 0.7636600 0.4212651 0.41832468 6 0.7029741 0.4235164 0.27945763 4.0927e-14 7.9967e-01 hypermethylated 1.3202e-12 1.0000e+00 hypermethylated 6.5774e-05 9.9704e-01 hypermethylated 2.1217e-03 1.0000e+00 hypermethylated 0.2344519 5.2036e-02 lowCoverage 7.7665e-01 lowCoverage 0.7676458 0.8431373 -2.9072e-03 4 0.7462561 0.767170 -0.0209135 6.8225e-01 2.9374e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 6.7007e-01 1.5274e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage -0.12201819 1.2286e-01 lowCoverage 1.0000e+00 lowCoverage 0.8311404 0.4212651 4.3042e-01 7 0.7407484 0.4235164 3.1723e-01 2.3879e-12 9.9828e-01 hypermethylated 8.5281e-11 1.0000e+00 hypermethylated 3.6587e-06 9.9989e-01 hypermethylated 2.1356e-04 1.0000e+00 hypermethylated 3.1219e-01 1.8218e-02 lowCoverage 3.2532e-01 lowCoverage 0.8407738 0.8431373 0.0418747 4 0.8049029 0.767170 0.0377334 5.5078e-02 4.9744e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 2.7478e-01 2.8675e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage -0.04427636 5.3785e-01 lowCoverage 1.00000000 lowCoverage 0.4209809 0.8431373 -0.4748119 4 0.4205267 0.767170 -0.3466428 9.9997e-01 1.1318e-04 lowCoverage 1.0000e+00 2.9021e-03 lowCoverage 9.9999e-01 2.3514e-03 lowCoverage 1.00000000 7.5851e-02 lowCoverage -0.3564701 1.1771e-02 lowCoverage 0.2942698 lowCoverage chr10 73677150 73678150 36483 ENSG00000200170 0.755509 132 4 0.493911 109 5 0.571429 27 5 0.5146237 107 4 0.480952 39 5 0.600667 81 4 0.5569591 85 5 0.590862 62 5 0.600000 28 5 0.430000 21 3 0.710530 118 5 0.6500000 23 1 0.500000 42 4 0.640000 38 4 0.571429 26 4 0.600000 10 0 0.0000000 17 1 0.742852 119 4 0.7333333 40 3 0.688235 58 4 0.642857 23 3 0.000000 1 0 0.490476 54 4 0.540000 25 4 0.688889 65 4 0.6979303 72 5 0.505051 18 1 0.428571 22 3 0.649000 85 4 0.5811966 65 5 0.6953463 55 4 0.626429 58 4 0.4981151 62 5 0.590608 65 5 0.3722222 62 5 0.4166667 11 0 0.4571429 55 5 0.6388278 54 5 0.4302821 92 4 0.617898 126 5 0.4650373 134 5 0.646957 67 4 0.432418 81 5 0.619543 0.505986 0.470588 0.5711259 0.487395 0.638039 0.4709322 0.545400 0.529412 0.505882 0.617948 0.529412 0.470588 0.647059 0.5378151 0.470588 0.4860241 0.746214 0.6666667 0.603806 0.547619 0.451320 0.476190 0.494118 0.738562 0.6166859 0.666667 0.470588 0.545882 0.4600302 0.6162465 0.525210 0.4404762 0.4771242 0.4444444 0.4264706 0.417367 0.6305538 0.520920 0.670255 0.5316966 0.634636 0.486928 0 0.6099831 0.5948435 0.03656503 4 0.5715956 0.5010127 0.07058286 0.146897 9.9047e-01 lowCoverage 1 1.000000 lowCoverage 0.137201 0.97898301 lowCoverage 1 1.00000 lowCoverage 2.6086e-02 0.699452 lowCoverage 1 lowCoverage 0.6104996 0.5048544 0.11680950 4 0.6668615 0.5631446 0.10371688 9.1862e-05 9.9972e-01 lowCoverage 1.4353e-03 1.0000e+00 lowCoverage 1.9627e-03 9.6599e-01 lowCoverage 3.8689e-02 1.0000e+00 lowCoverage 0.0759675 1.9345e-01 lowCoverage 1.0000e+00 lowCoverage 0.6095076 0.5840000 4.0195e-02 4 0.6002338 0.502957 0.0972773 5.0167e-03 6.6178e-01 lowCoverage 1.7917e-01 1.0000e+00 lowCoverage 3.8442e-02 6.2398e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 0.05304610 3.9539e-01 lowCoverage 1.0000e+00 lowCoverage 0.5959410 0.5048544 8.4865e-02 5 0.5845148 0.5631446 2.1370e-02 2.5006e-02 9.6079e-01 weaklyHypermeth 2.6602e-01 1.0000e+00 insignificant 6.7616e-02 9.7893e-01 insignificant 7.7720e-01 1.0000e+00 insignificant 4.9882e-02 4.8457e-01 lowCoverage 1.0000e+00 lowCoverage 0.5951493 0.5840000 0.0281792 5 0.5680844 0.502957 0.0651279 2.8923e-02 2.4103e-01 weaklyHypermeth 7.2307e-01 1.0000e+00 insignificant 2.0481e-01 2.1516e-01 insignificant 1.0000e+00 1.000000 insignificant 0.02696028 7.1764e-01 lowCoverage 1.00000000 lowCoverage 0.5016287 0.5840000 -0.0565391 5 0.4757735 0.502957 -0.0271830 7.1373e-01 1.4445e-02 weaklyHypometh 1.0000e+00 2.0346e-01 insignificant 8.1695e-01 4.9080e-02 weaklyHypometh 1.00000000 7.6687e-01 insignificant -0.0229214 7.2489e-01 lowCoverage 1.0000000 lowCoverage chr10 73683450 73684450 36484 ENSG00000200170 0.658974 91 5 0.519204 105 6 0.654762 41 4 0.6204416 82 4 0.616780 45 5 0.668155 81 6 0.5299145 41 3 0.657699 55 5 0.591667 38 5 0.666667 27 4 0.698777 94 5 0.5555556 11 1 0.608730 41 4 0.563203 41 5 0.592381 38 5 0.800000 12 1 1.0000000 13 1 0.605478 62 3 0.6952862 45 4 0.602222 52 5 0.850000 13 0 0.680000 14 2 0.664225 57 5 0.741071 43 3 0.724794 60 4 0.6321429 88 5 0.683333 24 4 0.666667 6 0 0.641667 72 5 0.6225412 72 4 0.7668845 70 6 0.632966 82 6 0.6245370 64 5 0.755387 46 4 0.6746032 46 4 0.6666667 23 1 0.5152476 54 2 0.6607305 87 5 0.6338361 60 3 0.618651 87 5 0.7526144 92 5 0.578788 35 3 0.631686 81 6 0.692075 0.503318 0.624459 0.6479927 0.522727 0.665855 0.4965035 0.736521 0.640152 0.722222 0.616928 0.691364 0.684644 0.724124 0.6406926 0.848485 0.8738513 0.683988 0.7023263 0.653199 0.844697 0.681818 0.631735 0.648990 0.750430 0.6203463 0.792929 0.732727 0.643939 0.6067614 0.7747079 0.633189 0.5902778 0.7085246 0.6825397 0.6969697 0.589084 0.6007638 0.727022 0.714857 0.7201426 0.646350 0.596094 0 0.6554455 0.7000000 -0.02749021 5 0.7456508 0.6364301 0.10922073 0.961449 1.9614e-01 insignificant 1 1.000000 insignificant 0.908928 0.61882639 insignificant 1 1.00000 insignificant -4.6896e-02 0.136382 lowCoverage 1 lowCoverage 0.6551041 0.6718750 0.02754968 4 0.7093152 0.6548239 0.05449133 3.4734e-02 8.1060e-01 lowCoverage 3.5443e-01 1.0000e+00 lowCoverage 1.4865e-01 9.3698e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0042338 9.1733e-01 lowCoverage 1.0000e+00 lowCoverage 0.6518299 0.6920904 -3.1775e-02 5 0.5664581 0.595304 -0.0288463 9.6061e-01 3.7544e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.8891e-01 3.9740e-01 insignificant 1.0000e+00 1.000000 insignificant 0.00217971 9.5478e-01 lowCoverage 1.0000e+00 lowCoverage 0.6984925 0.6718750 6.0012e-02 4 0.5844915 0.6548239 -7.0332e-02 2.4320e-02 9.9655e-01 lowCoverage 2.6435e-01 1.0000e+00 lowCoverage 7.2358e-02 9.8716e-01 lowCoverage 8.2224e-01 1.0000e+00 lowCoverage 4.2662e-02 2.8582e-01 lowCoverage 1.0000e+00 lowCoverage 0.6996644 0.6940510 -0.0013943 5 0.6819068 0.694522 -0.0126150 7.9917e-01 7.5499e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.2457e-01 8.5809e-01 insignificant 1.0000e+00 1.000000 insignificant 0.04907581 1.9960e-01 lowCoverage 1.00000000 lowCoverage 0.6708464 0.6940510 -0.0571952 4 0.5972946 0.694522 -0.0972272 9.8872e-01 6.1685e-02 lowCoverage 1.0000e+00 7.0096e-01 lowCoverage 9.9095e-01 1.8090e-01 lowCoverage 1.00000000 1.0000e+00 lowCoverage 0.0064136 8.8559e-01 lowCoverage 1.0000000 lowCoverage chr10 73690050 73691050 36486 ENSG00000200170 0.123810 203 7 0.119643 252 7 0.060894 398 7 0.1428571 257 6 0.038961 304 7 0.109648 349 6 0.0816327 325 7 0.079365 351 7 0.067036 393 7 0.089286 448 7 0.103876 314 7 0.1062629 567 7 0.083754 306 7 0.129219 325 5 0.051948 381 7 0.036560 577 6 0.0602484 127 3 0.098278 184 7 0.1326901 157 6 0.132324 255 7 0.067669 118 7 0.123595 132 6 0.109977 115 7 0.064286 159 7 0.064935 91 6 0.1146825 294 7 0.085317 310 7 0.033807 150 7 0.099944 214 6 0.0668143 352 7 0.0895753 273 7 0.107761 328 7 0.0779221 181 7 0.136364 128 6 0.0659341 293 7 0.0666667 29 3 0.0856375 122 7 0.1407658 230 7 0.1000000 238 6 0.095238 210 6 0.1179487 174 6 0.166667 161 5 0.104274 178 6 0.048325 0.059809 0.032153 0.0717703 0.019574 0.056467 0.0410116 0.039872 0.035261 0.044856 0.065873 0.049744 0.039563 0.058517 0.0260983 0.020873 0.0300083 0.058383 0.0661267 0.072178 0.033996 0.075785 0.078776 0.032297 0.032623 0.0603070 0.039972 0.018380 0.046646 0.0332888 0.0446786 0.059179 0.0391475 0.0876423 0.0331248 0.0239733 0.042027 0.0678478 0.050239 0.047847 0.0620169 0.071770 0.045393 5 0.0322880 0.0615142 0.00294060 7 0.0967016 0.0887223 0.00797937 0.679466 5.1801e-01 insignificant 1 1.000000 insignificant 0.606213 0.74728605 insignificant 1 1.00000 insignificant 6.7176e-03 0.531646 insignificant 1 insignificant 0.0322880 0.0630722 0.00332248 7 0.0967016 0.0887858 0.00791583 6.1426e-01 6.3927e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.4637e-01 8.7742e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0031337 8.4708e-01 insignificant 1.0000e+00 insignificant 0.0322880 0.0312175 4.0661e-05 6 0.0967016 0.098979 -0.0022777 3.7030e-01 8.8197e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.8283e-01 7.6267e-01 insignificant 1.0000e+00 1.000000 insignificant -0.02441081 1.4742e-01 insignificant 1.0000e+00 insignificant 0.0615142 0.0630722 -7.8677e-04 7 0.0887223 0.0887858 -6.3532e-05 8.0885e-01 8.6262e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.9671e-01 9.3643e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -9.8513e-03 5.5310e-01 insignificant 1.0000e+00 insignificant 0.0615142 0.0312175 -0.0021530 6 0.0887223 0.098979 -0.0102571 3.0017e-01 6.2695e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.7929e-01 4.7819e-01 insignificant 1.0000e+00 1.000000 insignificant -0.03112839 7.8810e-02 insignificant 1.00000000 insignificant 0.0630722 0.0312175 -0.0016588 6 0.0887858 0.098979 -0.0101936 6.8814e-01 7.4524e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.5784e-01 7.6361e-01 insignificant 1.00000000 1.0000e+00 insignificant -0.0212771 2.9367e-01 insignificant 1.0000000 insignificant chr10 73690250 73691250 36487 ENSG00000200170 0.123810 203 7 0.119643 252 7 0.060894 398 7 0.1428571 257 6 0.038961 304 7 0.109648 349 6 0.0816327 325 7 0.079365 351 7 0.067036 393 7 0.089286 448 7 0.103876 314 7 0.1062629 567 7 0.083754 306 7 0.129219 325 5 0.051948 381 7 0.036560 577 6 0.0602484 127 3 0.098278 184 7 0.1326901 157 6 0.132324 255 7 0.067669 118 7 0.123595 132 6 0.109977 115 7 0.064286 159 7 0.064935 91 6 0.1146825 294 7 0.085317 310 7 0.033807 150 7 0.099944 214 6 0.0668143 352 7 0.0895753 273 7 0.107761 328 7 0.0779221 181 7 0.136364 128 6 0.0659341 293 7 0.0666667 29 3 0.0856375 122 7 0.1407658 230 7 0.1000000 238 6 0.095238 210 6 0.1179487 174 6 0.166667 161 5 0.104274 178 6 0.048325 0.059809 0.032153 0.0717703 0.019574 0.056467 0.0410116 0.039872 0.035261 0.044856 0.065873 0.049744 0.039563 0.058517 0.0260983 0.020873 0.0300083 0.058383 0.0661267 0.072178 0.033996 0.075785 0.078776 0.032297 0.032623 0.0603070 0.039972 0.018380 0.046646 0.0332888 0.0446786 0.059179 0.0391475 0.0876423 0.0331248 0.0239733 0.042027 0.0678478 0.050239 0.047847 0.0620169 0.071770 0.045393 5 0.0322880 0.0615142 0.00294060 7 0.0967016 0.0887223 0.00797937 0.679466 5.1801e-01 insignificant 1 1.000000 insignificant 0.606213 0.74728605 insignificant 1 1.00000 insignificant 6.7176e-03 0.531646 insignificant 1 insignificant 0.0322880 0.0630722 0.00332248 7 0.0967016 0.0887858 0.00791583 6.1426e-01 6.3927e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.4637e-01 8.7742e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0031337 8.4708e-01 insignificant 1.0000e+00 insignificant 0.0322880 0.0312175 4.0661e-05 6 0.0967016 0.098979 -0.0022777 3.7030e-01 8.8197e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.8283e-01 7.6267e-01 insignificant 1.0000e+00 1.000000 insignificant -0.02441081 1.4742e-01 insignificant 1.0000e+00 insignificant 0.0615142 0.0630722 -7.8677e-04 7 0.0887223 0.0887858 -6.3532e-05 8.0885e-01 8.6262e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.9671e-01 9.3643e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -9.8513e-03 5.5310e-01 insignificant 1.0000e+00 insignificant 0.0615142 0.0312175 -0.0021530 6 0.0887223 0.098979 -0.0102571 3.0017e-01 6.2695e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.7929e-01 4.7819e-01 insignificant 1.0000e+00 1.000000 insignificant -0.03112839 7.8810e-02 insignificant 1.00000000 insignificant 0.0630722 0.0312175 -0.0016588 6 0.0887858 0.098979 -0.0101936 6.8814e-01 7.4524e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.5784e-01 7.6361e-01 insignificant 1.00000000 1.0000e+00 insignificant -0.0212771 2.9367e-01 insignificant 1.0000000 insignificant chr10 73696250 73697250 36489 ENSG00000200170 0.695121 151 6 0.731750 166 6 0.671449 141 6 0.7775679 124 6 0.587302 53 6 0.872858 421 6 0.8242929 78 6 0.892005 147 6 0.888348 75 5 0.869108 77 6 0.707435 326 6 0.8708333 54 4 0.781169 103 6 0.925000 33 4 0.831680 87 6 0.669697 36 4 0.5787037 34 3 0.654905 122 6 0.6181313 131 6 0.860761 296 6 0.770797 71 4 0.594797 53 4 0.830417 107 6 0.608677 121 6 0.788272 52 4 0.5381794 157 6 0.782792 96 6 0.747428 60 4 0.861059 86 6 0.8197508 238 6 0.8766181 163 6 0.789887 319 6 0.5201132 143 6 0.713869 80 6 0.8363647 180 4 0.6833333 16 2 0.8445640 126 6 0.7188865 165 6 0.6725254 121 6 0.804349 143 6 0.8630952 101 6 0.879802 98 6 0.884835 104 6 0.906813 0.802221 0.698065 0.8120116 0.676951 0.916970 0.8804644 0.873551 0.891628 0.908867 0.849645 0.844970 0.789603 0.878920 0.8472222 0.744164 0.7231297 0.850255 0.8506306 0.884055 0.863587 0.863764 0.884147 0.846507 0.847798 0.8544212 0.867627 0.938281 0.872709 0.8774120 0.8517703 0.878386 0.7207682 0.7569585 0.8168990 0.7343195 0.845701 0.8430377 0.896744 0.912477 0.9068047 0.918746 0.929609 4 0.8534840 0.8608011 -0.01104526 6 0.7396762 0.7188203 0.02085590 0.659230 2.5059e-01 insignificant 1 1.000000 insignificant 0.663388 0.12392143 insignificant 1 1.00000 insignificant 1.4683e-02 0.719196 insignificant 1 insignificant 0.8534840 0.7929577 0.04881885 6 0.7396762 0.6969471 0.04272908 7.8948e-02 9.6341e-01 insignificant 7.5911e-01 1.0000e+00 insignificant 2.9448e-01 9.3651e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0458840 4.2442e-01 insignificant 1.0000e+00 insignificant 0.8534840 0.8818342 -6.3757e-02 6 0.7396762 0.769796 -0.0301194 9.9296e-01 2.5058e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.5561e-01 5.3469e-02 insignificant 1.0000e+00 1.000000 insignificant -0.05551536 2.7276e-01 insignificant 1.0000e+00 insignificant 0.8608011 0.7929577 6.1264e-02 6 0.7188203 0.6969471 2.1873e-02 1.5084e-02 8.6582e-01 weaklyHypermeth 1.6723e-01 1.0000e+00 insignificant 8.9636e-02 8.8772e-01 insignificant 9.7430e-01 1.0000e+00 insignificant 3.1201e-02 6.0262e-01 insignificant 1.0000e+00 insignificant 0.8608011 0.8818342 -0.0453027 6 0.7188203 0.769796 -0.0509753 9.8273e-01 1.7393e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.2291e-01 1.1859e-01 insignificant 1.0000e+00 1.000000 insignificant -0.07019826 1.9991e-01 insignificant 1.00000000 insignificant 0.7929577 0.8818342 -0.1075170 6 0.6969471 0.769796 -0.0728484 9.9502e-01 1.2735e-02 weaklyHypometh 1.0000e+00 1.8456e-01 insignificant 9.7185e-01 1.2022e-01 insignificant 1.00000000 1.0000e+00 insignificant -0.1013994 1.4037e-01 insignificant 1.0000000 insignificant chr10 73759750 73760750 36497 DDIT4 ENSG00000168209 0.828418 157 5 0.706548 89 5 0.784615 65 5 0.8130191 80 5 0.871795 56 5 0.789402 129 5 0.8455128 86 5 0.831228 71 5 0.645359 62 5 0.798697 81 5 0.768224 151 5 0.7387363 49 5 0.847970 69 5 NA 0 0 0.828758 87 5 0.871329 58 5 0.7811189 64 5 0.821503 100 5 0.8550489 94 5 0.858284 140 5 0.774242 47 5 0.751667 51 5 0.835165 67 5 0.833333 18 2 0.640000 26 4 0.8102919 145 5 0.840000 42 5 0.933333 13 0 0.765101 71 5 0.8262121 114 5 0.7503953 109 5 0.777913 241 5 0.6403975 99 5 0.750232 78 5 0.7179400 91 5 0.7241026 50 5 0.9131868 45 3 0.7960976 112 5 0.8020422 180 5 0.834836 180 5 0.8503272 136 5 0.835556 144 5 0.847296 130 5 0.822531 0.708725 0.787563 0.8190900 0.867419 0.794069 0.8489175 0.837299 0.651188 0.809066 0.762756 0.730473 0.850696 NA 0.8376776 0.887693 0.7949625 0.822024 0.8547702 0.865974 0.766059 0.748503 0.837665 0.820359 0.646707 0.8201385 0.829940 0.920160 0.750726 0.8285474 0.7516437 0.787271 0.6540261 0.7634182 0.7145740 0.7314602 0.923834 0.8008733 0.817228 0.840903 0.8630813 0.840985 0.846208 5 0.8110190 0.7966102 0.01431750 5 0.8085475 0.7933634 0.01518403 0.206566 5.8182e-01 insignificant 1 1.000000 insignificant 0.176694 0.30737063 insignificant 1 1.00000 insignificant 9.6991e-03 0.695708 lowCoverage 1 lowCoverage 0.8110190 0.7431579 0.06760770 5 0.8085475 0.7407911 0.06775633 4.6589e-04 9.9357e-01 weaklyHypermeth 6.5619e-03 1.0000e+00 weaklyHypermeth 1.5545e-02 9.5317e-01 weaklyHypermeth 2.1590e-01 1.0000e+00 insignificant 0.0475108 2.7572e-01 lowCoverage 1.0000e+00 lowCoverage 0.8110190 0.8324675 -2.1979e-02 5 0.8085475 0.830078 -0.0215307 8.8208e-01 1.9082e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.2777e-01 1.3603e-01 insignificant 1.0000e+00 1.000000 insignificant -0.02950795 7.8990e-02 lowCoverage 1.0000e+00 lowCoverage 0.7966102 0.7431579 5.0927e-02 5 0.7933634 0.7407911 5.2572e-02 1.3648e-03 8.9297e-01 weaklyHypermeth 1.9222e-02 1.0000e+00 weaklyHypermeth 5.1783e-02 7.9098e-01 insignificant 6.2389e-01 1.0000e+00 insignificant 3.7812e-02 4.0132e-01 lowCoverage 1.0000e+00 lowCoverage 0.7966102 0.8324675 -0.0370152 5 0.7933634 0.830078 -0.0367147 9.2438e-01 9.9922e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 7.6353e-01 1.0228e-01 insignificant 1.0000e+00 1.000000 insignificant -0.03920705 9.8178e-02 lowCoverage 1.00000000 lowCoverage 0.7431579 0.8324675 -0.0892555 5 0.7407911 0.830078 -0.0892870 9.9929e-01 2.8527e-03 weaklyHypometh 1.0000e+00 4.9495e-02 weaklyHypometh 9.9755e-01 2.6451e-02 weaklyHypometh 1.00000000 4.3362e-01 insignificant -0.0770188 9.6263e-02 lowCoverage 1.0000000 lowCoverage chr10 74333050 74334050 36518 OIT3 ENSG00000138315 0.907879 230 8 0.871947 117 8 0.764744 105 6 0.8860104 262 8 0.970089 113 6 0.866701 476 8 0.8452379 153 8 0.859193 168 8 0.852067 114 7 0.927046 99 8 0.898845 268 8 0.9488636 63 6 0.933049 114 8 0.741818 45 4 0.873551 138 8 0.902778 39 4 0.7287879 29 2 0.928065 189 8 0.9337635 257 8 0.785336 399 8 0.791378 79 6 0.888406 124 6 0.782445 102 6 0.784867 143 6 0.868269 69 6 0.9455907 216 8 0.849836 136 5 0.622731 71 5 0.810976 151 4 0.8930216 192 8 0.9051141 249 8 0.805682 383 8 0.7312850 186 8 0.831543 116 6 0.8134543 153 5 0.6666667 15 2 0.8507159 156 5 0.7960852 305 8 0.8707299 281 8 0.930518 191 8 0.9080488 179 8 0.784381 182 8 0.922347 188 6 0.906039 0.861485 0.838339 0.9235514 0.966913 0.918306 0.9059690 0.908385 0.910254 0.956751 0.924811 0.953979 0.965309 0.915225 0.9415846 0.887642 0.9329552 0.926613 0.9533399 0.924632 0.919408 0.908646 0.876560 0.909462 0.928650 0.9380962 0.839908 0.877903 0.878290 0.9270264 0.8631853 0.906110 0.7737609 0.8573758 0.8392769 0.7095065 0.861568 0.8122474 0.917780 0.940154 0.9366368 0.884335 0.921020 4 0.9008289 0.8919060 0.01125972 8 0.8317499 0.8222661 0.00948383 0.280850 7.8939e-01 insignificant 1 1.000000 insignificant 0.075063 0.96302288 insignificant 1 1.00000 insignificant 4.2262e-02 0.157574 insignificant 1 insignificant 0.9013041 0.8195489 0.08930250 8 0.8730207 0.7875845 0.08543626 4.9419e-08 9.9998e-01 weaklyHypermeth 1.0743e-06 1.0000e+00 weaklyHypermeth 2.2110e-04 9.9994e-01 weaklyHypermeth 5.9755e-03 1.0000e+00 weaklyHypermeth 0.0896635 2.3651e-02 weaklyHypermeth 4.0778e-01 insignificant 0.9008289 0.8971596 -3.3255e-03 8 0.8317499 0.816391 0.0153591 5.0190e-01 3.9051e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.9987e-01 7.5630e-01 insignificant 1.0000e+00 1.000000 insignificant -0.01191638 7.1103e-01 insignificant 1.0000e+00 insignificant 0.8941548 0.8195489 7.6142e-02 8 0.8715826 0.7875845 8.3998e-02 1.3740e-04 9.9994e-01 weaklyHypermeth 2.2900e-03 1.0000e+00 weaklyHypermeth 4.1096e-02 9.9749e-01 weaklyHypermeth 5.2020e-01 1.0000e+00 insignificant 4.7401e-02 2.2888e-01 insignificant 1.0000e+00 insignificant 0.8919060 0.8971596 -0.0187544 8 0.8222661 0.816391 0.0058753 6.5396e-01 1.7591e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.8965e-01 1.9764e-01 insignificant 1.0000e+00 1.000000 insignificant -0.05417858 1.6277e-01 insignificant 1.00000000 insignificant 0.8195489 0.8979392 -0.0943415 8 0.7875845 0.895488 -0.1079040 9.9995e-01 1.7473e-03 weaklyHypometh 1.0000e+00 3.3602e-02 weaklyHypometh 9.9927e-01 1.7481e-02 weaklyHypometh 1.00000000 3.1784e-01 insignificant -0.1015799 2.8675e-02 weaklyHypometh 0.5120613 insignificant chr10 74508050 74509050 36521 ENSG00000210321 0.768545 125 6 0.614512 84 6 0.403704 42 4 0.7744565 95 6 0.700680 41 6 0.838620 76 6 0.7821429 39 6 0.534879 81 6 0.583333 30 4 0.833333 6 0 0.678288 172 6 0.5555556 16 0 0.805159 54 6 0.730159 43 4 0.800000 39 6 1.000000 8 0 0.6000000 5 0 0.744363 71 2 0.5238095 27 4 0.618592 83 6 1.000000 6 0 1.000000 5 0 0.775510 29 2 0.828571 30 2 0.805556 48 6 0.7689076 93 6 0.713889 34 5 0.821429 16 0 0.816993 69 6 0.6667929 89 6 0.6355159 69 6 0.588942 44 2 0.5960609 95 6 0.814815 47 6 0.5805861 51 6 0.6666667 14 0 0.3926768 38 2 0.7622054 83 6 0.6500411 65 2 0.857143 57 6 0.7063492 83 6 0.566667 28 2 0.647186 72 6 0.750076 0.721429 0.363333 0.7845109 0.735714 0.874669 0.7587500 0.652532 0.600000 0.850000 0.805952 0.600000 0.795417 0.683333 0.8200000 1.000000 0.6291938 0.838235 0.4000000 0.738995 0.897467 0.922505 0.814286 0.875000 0.825000 0.7573529 0.742500 0.735005 0.801961 0.7942502 0.7610417 0.799038 0.6147157 0.8166667 0.6865385 0.7000000 0.420076 0.7804293 0.664347 0.842857 0.7309524 0.590000 0.774784 0 0.7291117 0.7528302 -0.02309039 6 0.6919898 0.6893562 0.00263361 0.668802 1.4016e-01 insignificant 1 1.000000 insignificant 0.861140 0.03263927 weaklyHypometh 1 1.00000 insignificant -9.0669e-02 0.071558 lowCoverage 1 lowCoverage 0.7300885 0.6615854 0.06972685 6 0.7092129 0.5702171 0.13899579 7.0408e-03 9.8983e-01 weaklyHypermeth 7.9110e-02 1.0000e+00 weaklyHypermeth 1.3124e-02 9.9383e-01 weaklyHypermeth 1.8753e-01 1.0000e+00 insignificant 0.0590049 4.1680e-01 lowCoverage 1.0000e+00 lowCoverage 0.7310775 0.7377049 -6.1704e-03 6 0.7092129 0.701826 0.0073869 5.2840e-01 3.8214e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.2867e-01 3.3928e-01 insignificant 1.0000e+00 1.000000 insignificant 0.00902946 8.7941e-01 lowCoverage 1.0000e+00 lowCoverage 0.7571702 0.6615854 9.5862e-02 6 0.7266112 0.5702171 1.5639e-01 3.6638e-04 9.9546e-01 weaklyHypermeth 5.9093e-03 1.0000e+00 weaklyHypermeth 3.5716e-04 9.9904e-01 weaklyHypermeth 9.6530e-03 1.0000e+00 weaklyHypermeth 1.4967e-01 6.6587e-02 lowCoverage 9.6440e-01 lowCoverage 0.7557252 0.7377049 0.0171590 6 0.7164071 0.701826 0.0145811 1.4643e-01 5.2805e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.9334e-02 6.4454e-01 weaklyHypermeth 9.1670e-01 1.000000 insignificant 0.09969837 1.3526e-01 lowCoverage 1.00000000 lowCoverage 0.6636086 0.7392739 -0.0770750 6 0.6652532 0.735464 -0.0702104 9.6156e-01 9.6476e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7158e-01 8.7639e-02 insignificant 1.00000000 1.0000e+00 insignificant -0.0499754 5.3825e-01 lowCoverage 1.0000000 lowCoverage chr10 75249750 75250750 36532 ENSG00000214633 0.808743 264 6 0.772815 270 6 0.803267 144 5 0.8441026 134 5 0.788235 66 5 0.859427 889 6 0.7656270 300 6 0.807846 264 5 0.718463 355 5 0.839856 217 5 0.811342 152 5 0.8579248 91 5 0.796850 379 5 NA 0 0 0.879024 342 5 0.716299 141 5 0.7486977 97 5 0.805810 142 5 0.8438637 158 6 0.841936 797 5 0.763285 106 5 0.802676 108 3 0.805791 118 5 0.818400 196 6 0.906079 80 5 0.7885495 171 5 0.794475 250 5 0.761039 74 5 0.805743 124 5 0.8419449 267 6 0.6806136 223 5 0.831655 1413 5 0.7139940 276 5 0.792562 231 6 0.7579614 179 5 0.7057408 166 5 0.7368761 144 6 0.7045070 191 5 0.8309774 230 6 0.836382 224 6 0.7757027 169 5 0.837139 259 5 0.781378 173 5 0.816874 0.823295 0.791433 0.8667862 0.819177 0.868109 0.8068069 0.828811 0.747824 0.851344 0.826286 0.857138 0.825346 NA 0.8846337 0.759504 0.7672970 0.846890 0.8448465 0.854770 0.761696 0.801436 0.798154 0.776747 0.904759 0.8286047 0.759863 0.862129 0.819611 0.8332607 0.8432010 0.849985 0.7423914 0.7663105 0.7454711 0.7384313 0.743926 0.7493051 0.828826 0.873161 0.7859421 0.858944 0.803744 5 0.8861976 0.8760807 0.00601489 5 0.8121400 0.8279175 -0.01577746 0.431125 4.7320e-01 insignificant 1 1.000000 insignificant 0.066652 0.28917837 insignificant 1 1.00000 insignificant 5.7754e-03 0.761397 insignificant 1 insignificant 0.8861976 0.7809604 0.07520383 5 0.8121400 0.7439571 0.06818288 5.8455e-07 9.9978e-01 weaklyHypermeth 1.1029e-05 1.0000e+00 weaklyHypermeth 3.9957e-04 9.9627e-01 weaklyHypermeth 9.7455e-03 1.0000e+00 weaklyHypermeth 0.0705228 2.1235e-03 weaklyHypermeth 5.5881e-02 weaklyHypermeth 0.8861976 0.8473934 6.8257e-03 5 0.8121400 0.821695 -0.0095547 1.7206e-02 5.1341e-01 weaklyHypermeth 4.7722e-01 1.0000e+00 insignificant 2.0114e-01 3.8925e-01 insignificant 1.0000e+00 1.000000 insignificant -0.00651944 7.1694e-01 insignificant 1.0000e+00 insignificant 0.8760807 0.7809604 7.4346e-02 5 0.8279175 0.7439571 8.3960e-02 3.5835e-05 9.9900e-01 weaklyHypermeth 6.1785e-04 1.0000e+00 weaklyHypermeth 3.0716e-03 9.4873e-01 weaklyHypermeth 5.9070e-02 1.0000e+00 weaklyHypermeth 6.4747e-02 7.8697e-03 weaklyHypermeth 1.7108e-01 insignificant 0.8760807 0.8473934 0.0066744 5 0.8279175 0.821695 0.0062228 5.3625e-01 6.3446e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.7554e-01 6.7869e-01 insignificant 1.0000e+00 1.000000 insignificant -0.01229483 5.6449e-01 insignificant 1.00000000 insignificant 0.7809604 0.8473934 -0.0727253 5 0.7439571 0.821695 -0.0777375 9.7976e-01 1.5386e-03 weaklyHypometh 1.0000e+00 3.0168e-02 weaklyHypometh 9.3831e-01 1.0089e-02 weaklyHypometh 1.00000000 2.1019e-01 insignificant -0.0770422 3.7879e-03 weaklyHypometh 0.1262628 insignificant chr10 75337750 75338750 36541 CAMK2G ENSG00000148660 0.739914 230 8 0.543631 154 8 0.405489 168 7 0.6451872 140 8 0.601776 72 5 0.670963 302 8 0.6519324 171 8 0.588499 136 8 0.540098 109 5 0.693211 93 8 0.672125 274 7 0.6003731 105 5 0.541964 153 8 0.472222 14 1 0.574159 112 8 0.627661 76 5 0.6350000 84 5 0.826341 161 8 0.6929453 98 8 0.666818 279 8 0.597242 83 6 0.607465 78 5 0.671781 157 8 0.704674 50 5 0.675680 60 5 0.7241879 198 8 0.589946 49 4 0.817460 35 1 0.783094 91 8 0.6655374 222 8 0.7159938 217 8 0.740713 358 8 0.7750915 162 8 0.733234 110 8 0.4312049 197 8 0.5375000 34 3 0.6607143 92 5 0.7179561 235 8 0.7630569 188 8 0.757910 179 8 0.6648675 205 8 0.655453 176 8 0.743006 235 8 0.711545 0.630362 0.589611 0.7733957 0.681266 0.760231 0.7108320 0.657179 0.668703 0.814097 0.665394 0.620099 0.555559 0.640741 0.6845802 0.701719 0.7418153 0.815570 0.6728474 0.801225 0.794775 0.722314 0.727062 0.773791 0.782608 0.7758849 0.715812 0.838745 0.806719 0.6595007 0.8205753 0.668830 0.7563789 0.7729073 0.5488817 0.6916667 0.655436 0.7817702 0.832896 0.841440 0.7280394 0.741322 0.819256 4 0.6728079 0.7102628 -0.03050647 8 0.6621147 0.7395180 -0.07740328 0.997649 1.3127e-01 insignificant 1 1.000000 insignificant 0.986634 0.03095655 weaklyHypometh 1 1.00000 insignificant -7.1632e-02 0.021429 weaklyHypometh 1 insignificant 0.6728079 0.6578313 0.01251330 8 0.6621147 0.6699640 -0.00784932 8.9475e-01 6.7296e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.5712e-01 5.8595e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0231014 7.0270e-01 insignificant 1.0000e+00 insignificant 0.6729646 0.7405900 -7.7085e-02 8 0.6379637 0.722697 -0.0847330 9.9662e-01 1.9764e-03 weaklyHypometh 1.0000e+00 2.4705e-01 insignificant 9.8817e-01 4.7962e-03 weaklyHypometh 1.0000e+00 0.586865 insignificant -0.09734318 9.7536e-03 weaklyHypometh 4.4334e-01 insignificant 0.7102628 0.6578313 4.2469e-02 8 0.7395180 0.6699640 6.9554e-02 5.2611e-01 9.8763e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.8353e-01 9.7429e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.8531e-02 4.3098e-01 insignificant 1.0000e+00 insignificant 0.7082278 0.7405900 -0.0509017 8 0.6717770 0.722697 -0.0509198 9.8421e-01 3.7491e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.6913e-01 2.8730e-01 insignificant 1.0000e+00 1.000000 insignificant -0.02571086 4.2858e-01 insignificant 1.00000000 insignificant 0.6565534 0.7405900 -0.1045207 8 0.6299460 0.722697 -0.0927507 9.9082e-01 1.5675e-02 weaklyHypometh 1.0000e+00 2.1771e-01 insignificant 9.8544e-01 1.6247e-01 insignificant 1.00000000 1.0000e+00 insignificant -0.0742418 2.4906e-01 insignificant 1.0000000 insignificant chr10 75370450 75371450 36542 C10orf55 ENSG00000222047 0.098082 598 14 0.037774 405 12 0.059611 466 12 0.0567636 547 14 0.029430 230 12 0.109135 750 12 0.0441142 559 12 0.035013 318 12 0.046381 556 12 0.053192 478 12 0.049107 447 12 0.0447513 554 12 0.039538 466 12 0.094872 63 5 0.033621 578 12 0.029440 316 12 0.0207896 427 12 0.079064 556 14 0.0260281 263 12 0.129390 586 12 0.051229 175 12 0.033692 361 12 0.125132 503 12 0.037241 212 12 0.048076 282 12 0.0342514 569 12 0.032046 310 12 0.021118 173 10 0.059574 345 12 0.0255352 479 12 0.1240234 551 12 0.078874 705 14 0.0144421 303 12 0.010949 383 12 0.2251082 248 8 0.0219914 283 12 0.0825743 161 13 0.0697769 417 14 0.0640582 682 14 0.072101 610 14 0.0617900 602 14 0.040060 605 14 0.072643 759 14 0.085870 0.047310 0.073250 0.0643686 0.034920 0.053995 0.0494956 0.045336 0.045782 0.073155 0.060050 0.051857 0.036558 0.053895 0.0380108 0.042761 0.0261170 0.057761 0.0223356 0.067291 0.070520 0.032236 0.053317 0.052729 0.041280 0.0236103 0.043979 0.026439 0.060673 0.0341756 0.0314172 0.061201 0.0136295 0.0100011 0.1356614 0.0241367 0.046914 0.0053119 0.063589 0.063450 0.0566024 0.035527 0.069421 12 0.0533726 0.0458834 0.00908267 12 0.0754695 0.1158227 -0.04035316 0.165317 9.5933e-01 insignificant 1 1.000000 insignificant 0.098103 0.98233731 insignificant 1 1.00000 insignificant -9.4505e-05 0.993974 insignificant 1 insignificant 0.0532751 0.0334448 0.01679263 12 0.0489363 0.0585354 -0.00959905 9.6476e-05 2.2927e-01 weaklyHypermeth 1.4473e-03 1.0000e+00 weaklyHypermeth 5.9382e-04 9.7112e-01 weaklyHypermeth 1.3810e-02 1.0000e+00 weaklyHypermeth -0.0150022 6.7519e-01 insignificant 1.0000e+00 insignificant 0.0532809 0.0605037 -5.5323e-03 12 0.0521988 0.061080 -0.0088809 5.7484e-01 2.7147e-06 weaklyHypometh 1.0000e+00 1.3573e-03 weaklyHypometh 6.0841e-01 2.5232e-03 weaklyHypometh 1.0000e+00 0.420532 insignificant -0.00632554 4.9300e-01 insignificant 1.0000e+00 insignificant 0.0456787 0.0334448 8.1774e-03 12 0.0605616 0.0585354 2.0262e-03 6.4437e-02 8.4368e-01 insignificant 6.3782e-01 1.0000e+00 insignificant 8.4383e-02 9.8464e-01 insignificant 9.2728e-01 1.0000e+00 insignificant -1.4908e-02 6.8318e-01 insignificant 1.0000e+00 insignificant 0.0457082 0.0605037 -0.0135801 12 0.0645990 0.061080 0.0035194 8.2170e-01 3.6331e-05 weaklyHypometh 1.0000e+00 9.0829e-03 weaklyHypometh 9.8360e-01 9.6420e-05 weaklyHypometh 1.0000e+00 0.048210 weaklyHypometh -0.00623103 6.0823e-01 insignificant 1.00000000 insignificant 0.0334635 0.0605037 -0.0275885 12 0.0624378 0.061080 0.0013581 9.8287e-01 4.6174e-05 weaklyHypometh 1.0000e+00 1.3581e-03 weaklyHypometh 9.9999e-01 2.1300e-05 weaklyHypometh 1.00000000 1.7750e-03 weaklyHypometh 0.0086767 8.0669e-01 insignificant 1.0000000 insignificant chr10 75419550 75420550 36548 C10orf55 ENSG00000222047 0.648619 188 6 0.683509 114 6 0.499062 96 6 0.6993090 125 6 0.720875 58 5 0.595697 217 6 0.6480460 103 6 0.644302 97 6 0.615075 86 6 0.692454 75 5 0.609330 172 6 0.6560606 37 3 0.659154 93 6 0.839286 13 1 0.601448 69 5 0.529275 57 5 0.8809211 56 3 0.654040 124 6 0.6611430 112 5 0.678698 162 5 0.694444 48 5 0.686111 33 3 0.625732 104 5 0.570418 44 5 0.773077 29 4 0.5852377 150 6 0.695286 63 5 0.666667 24 2 0.675641 93 6 0.6490062 163 6 0.6221265 156 6 0.673605 207 5 0.5086425 78 4 0.511800 77 6 0.5544375 98 4 0.5312500 26 3 0.5658390 64 5 0.6427271 159 6 0.7161192 192 6 0.848847 184 5 0.6524867 175 6 0.674333 137 5 0.660419 156 6 0.751691 0.778916 0.704721 0.7879156 0.784842 0.750689 0.6905147 0.734457 0.666441 0.762343 0.701995 0.809112 0.741349 0.819205 0.7288696 0.713596 0.8274060 0.732814 0.7157207 0.791136 0.840136 0.715162 0.735151 0.709268 0.774131 0.6537769 0.770366 0.803855 0.768401 0.7621027 0.6956774 0.707192 0.7394342 0.6259612 0.6932625 0.5504535 0.735123 0.7088281 0.760643 0.808841 0.7832221 0.761605 0.767685 3 0.7055095 0.7055655 0.01635113 6 0.6664947 0.6762425 -0.00974778 0.141179 3.7177e-01 insignificant 1 1.000000 insignificant 0.276128 0.31835027 insignificant 1 1.00000 insignificant 1.0359e-03 0.967261 lowCoverage 1 lowCoverage 0.7054528 0.6613546 0.05894409 6 0.6665463 0.5476346 0.11891171 3.7515e-02 1.0000e+00 weaklyHypermeth 3.7143e-01 1.0000e+00 insignificant 2.4073e-02 1.0000e+00 weaklyHypermeth 3.1675e-01 1.0000e+00 insignificant 0.1083658 1.5476e-03 lowCoverage 4.6169e-02 lowCoverage 0.7056530 0.7642180 -3.4760e-02 6 0.7081829 0.757971 -0.0497882 9.4846e-01 5.8202e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 7.9742e-01 1.0113e-01 insignificant 1.0000e+00 1.000000 insignificant -0.04962559 2.7016e-01 insignificant 1.0000e+00 insignificant 0.7055655 0.6613226 4.7017e-02 6 0.6762425 0.4966209 1.7962e-01 8.8233e-03 9.7652e-01 weaklyHypermeth 1.0887e-01 1.0000e+00 insignificant 1.0978e-02 9.9948e-01 weaklyHypermeth 1.7996e-01 1.0000e+00 insignificant 1.0733e-01 1.5346e-03 lowCoverage 4.3846e-02 lowCoverage 0.7055655 0.7639383 -0.0501642 6 0.6762425 0.723396 -0.0471530 9.8075e-01 2.8528e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.3140e-01 4.8964e-01 insignificant 1.0000e+00 1.000000 insignificant -0.05066148 2.5109e-01 lowCoverage 1.00000000 lowCoverage 0.6620000 0.7642180 -0.0927128 6 0.5595433 0.757971 -0.1984279 9.9963e-01 6.7273e-03 weaklyHypometh 1.0000e+00 1.0041e-01 insignificant 9.9999e-01 1.9977e-03 weaklyHypometh 1.00000000 6.8887e-02 weaklyHypometh -0.1579914 7.9723e-03 lowCoverage 0.2252685 lowCoverage chr10 75439150 75440150 36549 VCL ENSG00000035403 0.765993 200 6 0.688758 98 6 0.660870 97 6 0.8380682 128 6 0.900000 25 3 0.817368 226 6 0.7425926 92 6 0.830441 105 6 0.712121 58 6 0.850405 90 6 0.731521 189 6 0.6849747 48 3 0.797368 103 6 0.833333 14 1 0.712315 87 6 0.607692 45 3 0.8176471 53 3 0.828127 141 6 0.8909018 80 6 0.890106 187 6 0.803030 27 1 0.960648 61 6 0.793447 113 4 0.697479 35 1 0.851190 40 3 0.7851079 140 6 0.832456 45 5 0.904762 22 1 0.661111 51 2 0.7650419 146 6 0.7504082 122 6 0.863535 237 6 0.7090855 91 5 0.605640 101 6 0.7192499 121 6 0.8560606 31 3 0.6546296 45 5 0.7395291 128 6 0.8846497 179 3 0.841807 159 6 0.8442561 139 5 0.740187 162 6 0.838623 162 6 0.796607 0.700542 0.660233 0.8869434 0.827211 0.854137 0.7910809 0.846439 0.704762 0.844419 0.793752 0.749768 0.860186 0.845934 0.7745887 0.700785 0.8096038 0.845836 0.8984357 0.865900 0.822511 0.975907 0.815203 0.845738 0.899174 0.8216828 0.861081 0.919339 0.720181 0.8176329 0.7836929 0.837557 0.8004824 0.7188037 0.7519700 0.8022225 0.717120 0.7858678 0.910847 0.879343 0.8603433 0.804577 0.885992 1 0.7996128 0.8200192 -0.01224735 6 0.8326399 0.7563194 0.07632045 0.320997 7.0110e-01 insignificant 1 1.000000 insignificant 0.629055 0.46215109 insignificant 1 1.00000 insignificant -2.5655e-02 0.410823 lowCoverage 1 lowCoverage 0.7996128 0.7485493 0.05393675 6 0.8326399 0.6609520 0.17168782 6.4584e-02 9.9911e-01 insignificant 6.2703e-01 1.0000e+00 insignificant 3.0873e-02 9.9943e-01 weaklyHypermeth 3.8591e-01 1.0000e+00 insignificant 0.0659977 1.3195e-01 insignificant 1.0000e+00 insignificant 0.7987360 0.8451935 -5.4876e-02 6 0.7768531 0.823175 -0.0463219 9.9386e-01 2.1610e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9851e-01 1.2491e-02 weaklyHypometh 1.0000e+00 0.960847 insignificant -0.04987448 1.3277e-01 insignificant 1.0000e+00 insignificant 0.8200192 0.7485493 6.3568e-02 6 0.7563194 0.6609520 9.5367e-02 1.3326e-03 9.9556e-01 weaklyHypermeth 1.9037e-02 1.0000e+00 weaklyHypermeth 1.0724e-02 9.9993e-01 weaklyHypermeth 1.7873e-01 1.0000e+00 insignificant 9.1652e-02 5.5786e-02 lowCoverage 8.3263e-01 lowCoverage 0.8207364 0.8451935 -0.0383177 6 0.7917592 0.823175 -0.0314159 9.6267e-01 5.3872e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4647e-01 1.7736e-01 insignificant 1.0000e+00 1.000000 insignificant -0.02421991 4.9134e-01 lowCoverage 1.00000000 lowCoverage 0.7495146 0.8451935 -0.1007928 6 0.7146027 0.823175 -0.1085724 9.9993e-01 3.0905e-04 weaklyHypometh 1.0000e+00 7.0238e-03 weaklyHypometh 1.0000e+00 2.9585e-04 weaklyHypometh 1.00000000 1.2983e-02 weaklyHypometh -0.1158722 2.3803e-02 weaklyHypometh 0.4904788 insignificant chr10 76623850 76624850 36583 ENSG00000218910 0.753387 267 5 0.839607 146 5 0.759667 139 5 0.6364922 187 5 0.734066 71 5 0.872504 358 5 0.5064560 98 5 0.694844 133 5 0.731282 128 5 0.721889 107 5 0.737129 214 5 0.6315025 71 5 0.800487 199 5 0.882308 51 2 0.763813 145 5 0.762483 74 5 0.6602515 758 5 0.645643 215 5 0.8195534 156 5 0.799799 291 5 0.881816 110 5 0.835917 92 5 0.833778 177 5 0.752511 61 5 0.875556 53 4 0.7518222 220 5 0.700535 94 5 0.837229 71 3 0.721901 126 5 0.8651199 246 5 0.8664513 179 5 0.860235 411 5 0.7489504 182 5 0.747894 92 5 0.8020202 192 5 0.7218254 54 4 0.7932361 101 5 0.8131051 198 5 0.7639237 177 5 0.790830 198 5 0.8349105 212 5 0.768971 196 5 0.787754 251 5 0.787104 0.851290 0.789901 0.7913843 0.765500 0.843379 0.7028650 0.715230 0.764393 0.727722 0.759019 0.758775 0.829209 0.777568 0.7917237 0.820652 0.7777635 0.794739 0.8315389 0.828011 0.901678 0.828295 0.838786 0.719690 0.901763 0.7780157 0.699306 0.805557 0.754503 0.8737698 0.8892024 0.821225 0.7565719 0.7294987 0.8172127 0.7163357 0.819416 0.8343710 0.792539 0.822899 0.8494807 0.799342 0.815229 5 0.8366597 0.8353261 -0.01449739 5 0.6678757 0.8622467 -0.19437106 0.902083 2.1713e-02 weaklyHypometh 1 1.000000 insignificant 0.997654 0.01691575 weaklyHypometh 1 1.00000 insignificant -7.7581e-02 0.008913 lowCoverage 1 lowCoverage 0.8380300 0.8058608 0.01386546 5 0.7816926 0.7794766 0.00221600 2.8399e-01 6.4557e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.1350e-01 2.4038e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0335136 1.9819e-01 lowCoverage 1.0000e+00 lowCoverage 0.8380300 0.7998066 -4.6819e-03 5 0.7816926 0.792331 -0.0106382 4.2136e-01 3.7150e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.1386e-01 5.6789e-02 insignificant 1.0000e+00 1.000000 insignificant -0.05161966 4.2335e-02 lowCoverage 1.0000e+00 lowCoverage 0.8343357 0.8058608 2.7663e-02 5 0.8071454 0.7794766 2.7669e-02 1.9798e-01 8.3477e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.9057e-01 7.9714e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.4067e-02 8.4722e-02 lowCoverage 1.0000e+00 lowCoverage 0.8343357 0.7998066 0.0059189 5 0.8071454 0.792331 0.0148146 4.5122e-01 6.6493e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.4016e-01 8.2957e-01 insignificant 1.0000e+00 1.000000 insignificant 0.02596140 2.6747e-01 lowCoverage 1.00000000 lowCoverage 0.8058608 0.7998066 -0.0226695 5 0.7794766 0.792331 -0.0128542 5.1927e-01 2.1306e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.1966e-01 3.3700e-01 insignificant 1.00000000 1.0000e+00 insignificant -0.0181060 3.7693e-01 lowCoverage 1.0000000 lowCoverage chr10 76657550 76658550 36590 VDAC2 ENSG00000165637 0.854979 311 7 0.813270 206 7 0.691570 192 7 0.7578682 252 7 0.803458 90 7 0.831457 386 7 0.7728939 164 7 0.772314 262 7 0.743716 234 7 0.606237 172 7 0.659835 295 7 0.7684098 88 7 0.754943 229 7 0.597017 78 3 0.726243 197 7 0.824206 77 6 0.8465577 87 6 0.825696 276 7 0.7856757 133 6 0.718130 434 7 0.698737 114 7 0.711316 143 7 0.672252 255 7 0.623382 180 7 0.621101 95 6 0.7730808 406 7 0.708809 168 5 0.743981 137 5 0.628199 156 7 0.7001952 358 7 0.6829314 204 7 0.892138 410 7 0.6941380 235 7 0.615341 177 7 0.6001700 234 7 0.7534965 85 5 0.6207581 250 7 0.8269333 234 7 0.8868481 351 7 0.828003 292 7 0.7242606 264 7 0.781155 173 7 0.858538 274 7 0.887100 0.860595 0.739383 0.7770351 0.821861 0.863216 0.6666620 0.813446 0.736687 0.794865 0.743281 0.777958 0.763941 0.615658 0.6576112 0.840796 0.8250070 0.843118 0.8420922 0.818114 0.767424 0.664915 0.637801 0.652715 0.770952 0.6946950 0.690596 0.860466 0.696285 0.6129303 0.8892480 0.887179 0.6476852 0.5479850 0.7362824 0.8248769 0.633423 0.8647892 0.892525 0.873813 0.7149108 0.803969 0.876231 7 0.7874129 0.7155369 0.06522540 7 0.7163029 0.6486657 0.06763720 0.048497 4.9979e-01 weaklyHypermeth 1 1.000000 insignificant 0.173731 0.48951567 insignificant 1 1.00000 insignificant 5.3047e-02 0.064547 insignificant 1 insignificant 0.7874129 0.6477366 0.12299192 7 0.7163029 0.6137986 0.10250430 6.9404e-05 9.9742e-01 weaklyHypermeth 1.1194e-03 1.0000e+00 weaklyHypermeth 3.9243e-02 9.7413e-01 weaklyHypermeth 4.7857e-01 1.0000e+00 insignificant 0.0725844 1.1575e-01 insignificant 1.0000e+00 insignificant 0.7874129 0.8301329 -4.0623e-02 7 0.7163029 0.854460 -0.1381572 9.7719e-01 1.0966e-02 weaklyHypometh 1.0000e+00 7.8935e-01 insignificant 9.5488e-01 5.6564e-02 insignificant 1.0000e+00 1.000000 insignificant -0.05803699 1.2467e-01 insignificant 1.0000e+00 insignificant 0.7155369 0.6477366 6.2325e-02 7 0.6486657 0.6137986 3.4867e-02 6.4563e-04 9.6073e-01 weaklyHypermeth 1.0088e-02 1.0000e+00 weaklyHypermeth 3.6851e-02 8.8676e-01 weaklyHypermeth 4.8401e-01 1.0000e+00 insignificant 1.9537e-02 6.6033e-01 insignificant 1.0000e+00 insignificant 0.7155369 0.8301329 -0.0974064 7 0.6486657 0.854460 -0.2057944 9.1144e-01 5.2083e-03 weaklyHypometh 1.0000e+00 7.4404e-01 insignificant 9.2605e-01 5.1759e-02 insignificant 1.0000e+00 1.000000 insignificant -0.11108401 1.3524e-02 weaklyHypometh 0.71177063 insignificant 0.6477366 0.8301329 -0.1618286 7 0.6137986 0.854460 -0.2406615 1.0000e+00 1.9886e-03 weaklyHypometh 1.0000e+00 3.6826e-02 weaklyHypometh 1.0000e+00 1.7225e-02 weaklyHypometh 1.00000000 3.1784e-01 insignificant -0.1306214 2.1593e-02 weaklyHypometh 0.4854096 insignificant chr10 76691250 76692250 36592 COMTD1 ENSG00000165644 0.869980 443 7 0.713666 181 7 0.416781 95 7 0.8403297 318 7 0.852273 69 7 0.766430 335 7 0.7138352 155 7 0.767353 214 7 0.779315 212 7 0.897637 195 7 0.643094 251 7 0.7970109 155 7 0.655335 323 7 0.763912 197 7 0.779486 186 7 0.635101 113 7 0.5964286 51 7 0.597185 532 7 0.8726136 158 7 0.800828 182 7 0.727336 95 7 0.655997 200 7 0.910254 359 7 0.667752 90 7 0.750501 126 7 0.8681550 317 7 0.797914 179 7 0.869615 114 7 0.835325 111 7 0.7748322 294 7 0.7516637 179 7 0.823868 281 7 0.0401807 279 7 0.228231 125 7 0.3333333 145 3 0.1047619 41 3 0.2023349 157 7 0.0146405 337 7 0.6457636 351 7 0.640552 333 7 0.7027335 325 7 0.520818 426 7 0.681966 359 7 0.848198 0.757227 0.469948 0.8401665 0.839851 0.842777 0.8043359 0.834943 0.888190 0.879396 0.819567 0.917826 0.844221 0.773582 0.7712756 0.809869 0.7652935 0.596251 0.8764195 0.917040 0.724371 0.649514 0.910287 0.753268 0.777831 0.8760147 0.877298 0.864376 0.832488 0.8895347 0.8538045 0.830536 0.0395630 0.2033072 0.1469781 0.1006393 0.142543 0.0148274 0.678764 0.633610 0.6595701 0.588977 0.682927 7 0.8013793 0.8349680 -0.03502249 7 0.7407581 0.7688891 -0.02813093 0.978969 4.9356e-02 weaklyHypometh 1 1.000000 insignificant 0.695810 0.49804749 insignificant 1 1.00000 insignificant -4.8171e-02 0.181176 insignificant 1 insignificant 0.7990836 0.1134686 0.68390786 7 0.6732665 0.1570825 0.51618399 6.0564e-60 9.9989e-01 hypermethylated 6.0564e-57 1.0000e+00 hypermethylated 2.3912e-15 9.9998e-01 hypermethylated 1.1956e-12 1.0000e+00 hypermethylated 0.5840159 6.3067e-06 hypermethylated 3.0032e-04 hypermethylated 0.7990836 0.6488294 1.5186e-01 7 0.6732665 0.589697 0.0835699 4.2138e-08 9.9509e-01 weaklyHypermeth 5.2673e-06 1.0000e+00 weaklyHypermeth 4.3640e-08 9.9972e-01 weaklyHypermeth 2.1820e-05 1.000000 weaklyHypermeth 0.09956308 3.5272e-02 weaklyHypermeth 9.5658e-01 insignificant 0.8349680 0.1139944 7.2881e-01 7 0.7688891 0.1767178 5.9217e-01 1.0047e-51 9.9888e-01 hypermethylated 1.0047e-48 1.0000e+00 hypermethylated 2.0132e-13 9.9913e-01 hypermethylated 1.0066e-10 1.0000e+00 hypermethylated 6.3219e-01 6.7855e-06 hypermethylated 3.3928e-04 hypermethylated 0.8349680 0.6491913 0.1873212 7 0.7688891 0.663409 0.1054804 3.5957e-14 9.9129e-01 weaklyHypermeth 1.7979e-11 1.0000e+00 weaklyHypermeth 1.7881e-09 9.9871e-01 weaklyHypermeth 8.4724e-07 1.000000 weaklyHypermeth 0.14773446 4.7980e-03 weaklyHypermeth 0.43617965 insignificant 0.1134686 0.6488294 -0.5371882 7 0.1570825 0.589697 -0.4326141 1.0000e+00 8.8845e-28 hypomethylated 1.0000e+00 8.8845e-25 hypomethylated 1.0000e+00 2.5126e-08 hypomethylated 1.00000000 2.5126e-05 hypomethylated -0.4844528 3.2438e-05 hypomethylated 0.0036042 hypomethylated chr10 76724250 76725250 36594 ENSG00000220459 0.017538 1528 35 0.017367 1163 37 0.015439 1123 37 0.0076028 892 34 0.012713 727 37 0.027662 1484 37 0.0225680 1353 37 0.012723 762 37 0.010929 1112 37 0.011791 907 37 0.046632 1271 37 0.0272359 1054 37 0.016709 847 35 0.041667 40 3 0.040326 1144 35 0.047499 964 35 0.0077376 1024 33 0.012417 1240 34 0.0050461 851 35 0.043071 1606 37 0.026713 381 31 0.005893 770 32 0.059569 1163 35 0.035948 459 36 0.025827 544 31 0.0066411 1434 37 0.041151 767 36 0.031295 399 34 0.016697 863 35 0.0175151 1391 37 0.0309496 1240 37 0.024471 1920 37 0.0019305 828 37 0.008328 729 35 0.0046296 635 22 0.0019048 657 33 0.0342969 557 27 0.0016023 1162 37 0.0059777 2175 37 0.014304 1847 37 0.0025190 1212 32 0.014307 1428 34 0.017893 1661 34 0.018679 0.020853 0.013919 0.0093745 0.017103 0.029986 0.0271564 0.016613 0.013415 0.018435 0.025264 0.032620 0.018574 NA 0.0196357 0.021509 0.0135828 0.016125 0.0091323 0.016420 0.027024 0.009090 0.033395 0.010367 0.026796 0.0083978 0.012635 0.017200 0.025546 0.0104664 0.0070225 0.030741 0.0026664 0.0061865 0.0077684 0.0012969 0.032183 0.0023382 0.005818 0.010301 0.0036928 0.010482 0.010303 32 0.0188223 0.0211808 0.00064682 37 0.0454356 0.0269373 0.01849827 0.958579 2.3576e-01 insignificant 1 1.000000 insignificant 0.815411 0.85819381 insignificant 1 1.00000 insignificant -4.6555e-03 0.391931 insignificant 1 insignificant 0.0188223 0.0059107 0.01686731 35 0.0454356 0.0059936 0.03944196 2.1745e-04 9.9081e-01 weaklyHypermeth 3.1064e-03 1.0000e+00 weaklyHypermeth 6.4277e-05 9.9688e-01 weaklyHypermeth 2.1217e-03 1.0000e+00 weaklyHypermeth 0.0134516 5.4508e-02 insignificant 8.0160e-01 insignificant 0.0188223 0.0076895 1.0095e-02 34 0.0454356 0.011805 0.0336301 2.9074e-02 8.3478e-02 weaklyHypermeth 7.1551e-01 1.0000e+00 insignificant 9.1253e-02 7.1836e-01 insignificant 1.0000e+00 1.000000 insignificant 0.01123343 1.9182e-02 weaklyHypermeth 6.3938e-01 insignificant 0.0211808 0.0059107 1.7231e-02 35 0.0269373 0.0059936 2.0944e-02 7.8939e-04 1.0000e+00 weaklyHypermeth 1.1782e-02 1.0000e+00 weaklyHypermeth 2.9414e-03 9.9999e-01 weaklyHypermeth 5.7851e-02 1.0000e+00 weaklyHypermeth 1.8107e-02 2.0430e-02 weaklyHypermeth 3.4628e-01 insignificant 0.0211808 0.0076895 0.0104637 34 0.0269373 0.011805 0.0151319 1.9049e-02 8.2913e-01 weaklyHypermeth 5.2914e-01 1.0000e+00 insignificant 2.9392e-01 8.7087e-01 insignificant 1.0000e+00 1.000000 insignificant 0.01588890 7.8674e-03 weaklyHypermeth 0.56532756 insignificant 0.0059107 0.0076895 -0.0033885 34 0.0059936 0.011805 -0.0058118 1.0000e+00 1.0027e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.0000e+00 3.0844e-01 insignificant 1.00000000 1.0000e+00 insignificant -0.0022182 7.1967e-01 insignificant 1.0000000 insignificant chr10 76860750 76861750 36601 C10orf11 ENSG00000148655 0.042573 1245 33 0.055195 857 33 0.095091 1118 33 0.0443645 914 33 0.050167 700 33 0.146898 1436 33 0.1227869 1219 32 0.148373 1015 33 0.014231 1585 33 0.036969 1901 33 0.044567 1080 33 0.0178574 1781 33 0.042902 1219 33 0.011782 667 20 0.070848 1624 32 0.013134 1366 33 0.0057926 645 26 0.048876 1097 33 0.0144311 634 33 0.126404 1025 32 0.123326 355 19 0.041821 637 25 0.027123 904 33 0.047012 466 24 0.099624 427 19 0.0124866 1196 33 0.094830 562 22 0.070649 556 27 0.035515 730 33 0.0091124 1315 33 0.0069427 998 32 0.050900 1350 33 0.0047761 718 30 0.076040 559 32 0.4666667 144 6 0.0894558 231 20 0.0951748 487 28 0.0918921 1074 33 0.0630774 1560 33 0.131769 1063 33 0.0171843 1093 33 0.035002 1133 33 0.039031 1173 33 0.026295 0.016038 0.111350 0.0234251 0.093093 0.053389 0.0184280 0.024775 0.016944 0.019314 0.026813 0.024900 0.022040 0.018293 0.0087745 0.016366 0.0102375 0.031325 0.0171128 0.023507 0.038998 0.031544 0.026741 0.010620 0.020467 0.0162630 0.032001 0.010368 0.022966 0.0159237 0.0117741 0.027007 0.0023813 0.0289130 0.1302797 0.0661653 0.029901 0.0750511 0.069882 0.078437 0.0190930 0.050103 0.049013 22 0.0237375 0.0209606 0.00614738 33 0.1049712 0.0588008 0.04617040 0.053403 9.9901e-01 insignificant 1 1.000000 insignificant 0.038134 0.99999576 weaklyHypermeth 1 1.00000 insignificant 6.0503e-03 0.691142 insignificant 1 insignificant 0.0237395 0.0482415 -0.01662837 32 0.1069898 0.1027147 0.00427512 9.0600e-01 1.4595e-03 weaklyHypometh 1.0000e+00 2.9190e-01 insignificant 6.7646e-01 7.1871e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0796721 2.9247e-01 insignificant 1.0000e+00 insignificant 0.0233536 0.0461641 -2.2570e-02 33 0.0953185 0.081751 0.0135672 9.9905e-01 9.0657e-10 weaklyHypometh 1.0000e+00 9.0657e-07 weaklyHypometh 9.9998e-01 4.2320e-06 weaklyHypometh 1.0000e+00 0.004232 weaklyHypometh 0.00044918 9.8470e-01 insignificant 1.0000e+00 insignificant 0.0209628 0.0482415 -2.5200e-02 32 0.0599315 0.1027147 -4.2783e-02 9.8882e-01 1.9627e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9965e-01 3.4537e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -8.5722e-02 2.6165e-01 insignificant 1.0000e+00 insignificant 0.0199089 0.0461641 -0.0298324 33 0.0416618 0.081751 -0.0400896 1.0000e+00 1.0703e-09 weaklyHypometh 1.0000e+00 1.0703e-06 weaklyHypometh 1.0000e+00 1.5770e-06 weaklyHypometh 1.0000e+00 0.001577 weaklyHypometh -0.00560116 8.1384e-01 insignificant 1.00000000 insignificant 0.0466938 0.0461641 -0.0089542 32 0.0862210 0.081751 0.0044697 9.8809e-01 9.4676e-03 weaklyHypometh 1.0000e+00 1.3923e-01 insignificant 1.0000e+00 7.7124e-02 insignificant 1.00000000 1.0000e+00 insignificant 0.0801213 2.9833e-01 insignificant 1.0000000 insignificant chr10 78151150 78152150 36649 ENSG00000201954 0.668071 108 5 0.466994 81 5 0.533333 24 3 0.4585185 75 5 0.443333 41 5 0.546062 75 5 0.6713287 57 5 0.449231 50 3 0.454048 26 3 0.266667 11 0 0.477972 86 5 0.2000000 22 4 0.393889 31 4 0.339286 38 5 0.557143 31 5 0.375000 26 4 0.7500000 8 0 0.666788 73 4 0.5014286 40 5 0.477485 51 3 0.966667 33 1 1.000000 8 0 0.473214 42 2 0.553333 33 3 0.645989 99 5 0.4900000 55 5 0.579130 47 3 0.172222 42 1 0.411190 83 5 0.5242857 80 4 0.5475000 52 5 0.438562 49 3 0.4161154 95 5 0.415556 61 5 0.4002198 50 5 0.1250000 6 0 0.3673306 72 5 0.4416667 66 5 0.5922556 60 5 0.594783 76 5 0.5559298 76 5 0.625000 62 4 0.650877 61 5 0.684563 0.491170 0.519380 0.5120586 0.482558 0.583179 0.7140673 0.495528 0.476883 0.317829 0.495528 0.255814 0.424742 0.396179 0.6234773 0.514967 0.6206852 0.631938 0.5186877 0.492520 0.902396 0.721603 0.512251 0.570543 0.618592 0.5104651 0.538524 0.200258 0.459911 0.5892027 0.5747093 0.470512 0.4526342 0.4436693 0.4145668 0.3182483 0.428044 0.4134954 0.588101 0.632861 0.5811506 0.671705 0.638719 0 0.5220126 0.6179775 0.00390700 3 0.5070246 0.5164767 -0.00945210 0.715611 6.3316e-01 lowCoverage 1 1.000000 lowCoverage 0.862178 0.35473253 lowCoverage 1 1.00000 lowCoverage -8.2012e-02 0.274097 lowCoverage 1 lowCoverage 0.5220126 0.4126074 0.11534805 5 0.5070246 0.4153654 0.09165921 3.9750e-03 9.8715e-01 weaklyHypermeth 4.7321e-02 1.0000e+00 weaklyHypermeth 6.0287e-03 9.9253e-01 weaklyHypermeth 9.7236e-02 1.0000e+00 weaklyHypermeth 0.1238475 5.7061e-02 lowCoverage 8.1516e-01 lowCoverage 0.5220126 0.5910448 -8.2154e-02 5 0.5070246 0.621012 -0.1139878 9.8040e-01 1.3551e-02 weaklyHypometh 1.0000e+00 8.4805e-01 insignificant 9.9555e-01 3.8921e-03 weaklyHypometh 1.0000e+00 0.556010 insignificant -0.11894021 2.3138e-03 lowCoverage 1.8045e-01 lowCoverage 0.6179775 0.4126074 1.1517e-01 3 0.5164767 0.4153654 1.0111e-01 6.1901e-03 9.9623e-01 lowCoverage 8.0391e-02 1.0000e+00 lowCoverage 2.8988e-02 9.9826e-01 lowCoverage 4.0261e-01 1.0000e+00 lowCoverage 2.0586e-01 2.2404e-02 lowCoverage 3.7339e-01 lowCoverage 0.6179775 0.5910448 -0.0755516 3 0.5164767 0.621012 -0.1045357 9.7878e-01 2.4479e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.6984e-01 4.5711e-02 lowCoverage 1.0000e+00 1.000000 lowCoverage -0.03692789 5.9417e-01 lowCoverage 1.00000000 lowCoverage 0.4126074 0.5910448 -0.1989527 5 0.4153654 0.621012 -0.2056470 9.9999e-01 3.8551e-06 weaklyHypometh 1.0000e+00 1.5421e-04 weaklyHypometh 9.9998e-01 5.8031e-05 weaklyHypometh 1.00000000 3.6270e-03 weaklyHypometh -0.2427877 2.9709e-03 lowCoverage 0.1061052 lowCoverage chr10 78535350 78536350 36664 ENSG00000217610 0.742808 315 4 0.709545 148 5 0.650130 39 4 0.7406593 160 2 0.780000 37 4 0.738928 212 2 0.8143400 66 3 0.723232 36 3 0.722222 31 3 0.750000 10 0 0.790421 143 5 0.6000000 9 0 0.560766 42 3 0.500000 2 0 0.544974 24 3 0.937500 19 2 0.6528081 1697 2 0.339588 236 2 0.6675660 115 5 0.785665 151 2 0.614583 34 3 0.500000 5 0 0.647321 30 4 0.805983 44 4 0.889788 90 2 0.7365770 158 5 0.587302 39 5 0.500000 10 0 0.554051 86 3 0.8216345 123 5 0.7006552 110 5 0.765043 193 4 0.3238095 111 5 0.394226 126 5 0.3333333 32 2 0.3437500 129 2 0.4683333 71 4 0.4778125 188 5 0.4619318 346 2 0.459156 199 2 0.5196921 467 2 0.476190 47 2 0.259191 274 2 0.678510 0.506410 0.562662 0.6758242 0.725000 0.673660 0.7215100 0.681818 0.666667 0.750000 0.703488 0.750000 0.477273 0.481865 0.6219680 0.885844 0.6910101 0.257819 0.6011241 0.678498 0.437500 0.500000 0.647321 0.708974 0.618938 0.6311813 0.484127 0.500000 0.481025 0.7997704 0.5509828 0.706304 0.2172619 0.4401515 0.1240502 0.3437500 0.385417 0.3857272 0.387216 0.272067 0.5196921 0.511905 0.259191 0 0.8229226 0.7852495 -0.00259563 5 0.7837662 0.6485188 0.13524743 0.819517 1.7297e-01 insignificant 1 1.000000 insignificant 0.518699 0.88969078 insignificant 1 1.00000 insignificant 1.0646e-02 0.824801 lowCoverage 1 lowCoverage 0.8225158 0.2861492 0.52710850 5 0.6972727 0.3511257 0.34614700 2.2436e-18 6.7991e-01 hypermethylated 9.7546e-17 1.0000e+00 hypermethylated 1.4497e-04 9.7705e-01 hypermethylated 4.1421e-03 1.0000e+00 hypermethylated 0.2973468 1.3291e-06 lowCoverage 6.6456e-05 lowCoverage 0.8228719 0.4763691 3.6234e-01 2 0.7477273 0.520708 0.2270190 2.1380e-11 9.9999e-01 lowCoverage 5.3450e-09 1.0000e+00 lowCoverage 2.0741e-04 9.9999e-01 lowCoverage 2.0741e-02 1.000000 lowCoverage 0.25232535 1.7297e-03 lowCoverage 1.8045e-01 lowCoverage 0.7835165 0.2861492 4.8636e-01 5 0.7079263 0.3511257 3.5680e-01 1.4257e-14 8.9213e-01 hypermethylated 5.9404e-13 1.0000e+00 hypermethylated 2.6458e-04 9.5592e-01 hypermethylated 7.3493e-03 1.0000e+00 hypermethylated 2.8670e-01 1.5271e-05 lowCoverage 6.6578e-04 lowCoverage 0.7861021 0.4763691 0.3568042 2 0.7566053 0.520708 0.2358970 1.0926e-11 1.0000e+00 lowCoverage 3.6420e-09 1.0000e+00 lowCoverage 9.7776e-04 9.9973e-01 lowCoverage 6.5184e-02 1.000000 lowCoverage 0.24167919 2.2563e-03 lowCoverage 0.28204240 lowCoverage 0.2861492 0.4759760 -0.2231274 2 0.3511257 0.424850 -0.0737241 6.1562e-01 2.8762e-03 lowCoverage 1.0000e+00 4.9495e-02 lowCoverage 6.0168e-01 8.0931e-02 lowCoverage 1.00000000 1.0000e+00 lowCoverage -0.0450214 4.2682e-01 lowCoverage 1.0000000 lowCoverage chr10 79362850 79363850 36703 ENSG00000178775 0.778204 264 8 0.660336 854 8 0.727481 622 8 0.7924958 238 7 0.631671 1673 8 0.761982 445 8 0.7482851 1079 8 0.759287 554 8 0.775963 806 8 0.785029 816 8 0.770567 1230 8 0.6500919 1136 8 0.737965 842 8 0.837404 109 5 0.763015 1119 8 0.715247 1573 8 0.6694891 1106 7 0.677843 242 8 0.7546205 989 8 0.734393 382 8 0.761155 169 8 0.762148 81 5 0.775421 315 8 0.783711 263 7 0.696405 91 6 0.7612456 460 8 0.775854 211 6 0.742349 206 6 0.748626 477 8 0.7567417 465 8 0.7757549 402 8 0.805896 437 8 0.6640967 807 8 0.637917 676 8 0.7144978 864 8 0.7280563 53 5 0.7440425 361 8 0.7065062 341 8 0.7081653 196 8 0.839778 203 8 0.7678574 154 8 0.758049 215 8 0.816322 233 8 0.853641 0.803400 0.786822 0.8332513 0.822836 0.846351 0.8310857 0.816620 0.835704 0.836885 0.831903 0.784353 0.828951 0.848540 0.8546350 0.830393 0.7845072 0.822570 0.8415108 0.828985 0.821860 0.830842 0.843270 0.851556 0.794059 0.8299822 0.820266 0.847472 0.820990 0.8685265 0.8546326 0.871623 0.7283424 0.6812128 0.8098203 0.8435378 0.812079 0.7774476 0.804039 0.896035 0.8015987 0.816468 0.874542 6 0.6838734 0.7637685 -0.02143895 8 0.7395329 0.7699998 -0.03046682 0.947948 1.4459e-02 weaklyHypometh 1 1.000000 insignificant 0.852012 0.07797495 insignificant 1 1.00000 insignificant -2.5540e-02 0.084654 insignificant 1 insignificant 0.6838734 0.6418440 0.05040366 8 0.7395329 0.7000995 0.03943346 7.1595e-07 8.5696e-01 weaklyHypermeth 1.3017e-05 1.0000e+00 weaklyHypermeth 2.4950e-03 6.7219e-01 weaklyHypermeth 4.7980e-02 1.0000e+00 weaklyHypermeth 0.0373824 9.4028e-02 insignificant 1.0000e+00 insignificant 0.6838734 0.8241758 -1.5867e-02 8 0.7395329 0.791349 -0.0518164 8.0385e-01 5.3470e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 8.7879e-01 2.4245e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.04146578 1.5957e-01 insignificant 1.0000e+00 insignificant 0.7637685 0.6418440 7.6767e-02 8 0.7699998 0.7000995 6.9900e-02 1.6034e-07 9.9341e-01 weaklyHypermeth 4.1113e-06 1.0000e+00 weaklyHypermeth 9.5237e-04 9.3337e-01 weaklyHypermeth 2.2675e-02 1.0000e+00 weaklyHypermeth 6.2923e-02 9.8747e-03 weaklyHypermeth 2.0249e-01 insignificant 0.7637685 0.8241758 -0.0024075 8 0.7699998 0.791349 -0.0213495 3.1231e-01 1.2029e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.7456e-01 4.8345e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.01592532 5.4234e-01 insignificant 1.00000000 insignificant 0.6418440 0.8241758 -0.0759971 8 0.7000995 0.791349 -0.0912498 9.8309e-01 6.2404e-05 weaklyHypometh 1.0000e+00 1.7334e-03 weaklyHypometh 9.7648e-01 5.4262e-03 weaklyHypometh 1.00000000 1.2681e-01 insignificant -0.0788481 2.5312e-02 weaklyHypometh 0.4904788 insignificant chr10 79371950 79372950 36705 ENSG00000178775 0.788699 209 4 0.636266 373 6 0.460534 117 6 0.8399570 232 6 0.546324 60 3 0.819933 347 6 0.3851876 107 4 0.490147 231 6 0.557922 119 5 0.717026 79 5 0.771113 411 6 0.5466453 57 3 0.574315 126 6 0.754085 66 6 0.635149 114 5 0.636473 34 1 0.5772727 40 2 0.842540 222 6 0.6493651 143 6 0.773162 266 6 0.710317 69 4 0.703319 88 5 0.514015 106 4 0.844370 127 5 0.763971 36 3 0.7521238 348 6 0.495522 91 4 0.717215 69 4 0.815961 96 4 0.7301937 363 6 0.7271905 288 6 0.811244 396 6 0.7579666 204 6 0.197727 66 6 0.6990221 242 4 0.2037037 14 1 0.8002717 224 6 0.5702971 243 6 0.7976236 200 6 0.834542 187 6 0.5551151 179 4 0.371540 134 4 0.838730 177 6 0.759268 0.519393 0.496767 0.7851455 0.589606 0.803869 0.4388745 0.465618 0.552661 0.732535 0.730049 0.407855 0.362569 0.697488 0.5577972 0.637451 0.4708024 0.743762 0.5845801 0.701623 0.723160 0.634490 0.704907 0.831282 0.723454 0.6828812 0.566155 0.662845 0.720667 0.6712361 0.6552137 0.788235 0.6859144 0.1743831 0.7188320 0.3701510 0.825623 0.4313681 0.734776 0.763054 0.6045416 0.478610 0.779100 3 0.6597077 0.7188252 -0.06136799 6 0.6912355 0.7493370 -0.05810149 0.989250 1.6228e-02 weaklyHypometh 1 1.000000 insignificant 0.996227 0.01228087 weaklyHypometh 1 1.00000 insignificant -6.5348e-02 0.142434 lowCoverage 1 lowCoverage 0.6597077 0.6414904 0.01091199 6 0.6912355 0.6630005 0.02823494 3.6778e-02 4.6465e-01 weaklyHypermeth 3.6778e-01 1.0000e+00 insignificant 1.1245e-01 9.1397e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.1119410 3.7055e-01 lowCoverage 1.0000e+00 lowCoverage 0.6597077 0.6818700 -3.8762e-02 4 0.6912355 0.744888 -0.0536522 9.1077e-01 1.0308e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.2658e-01 2.2351e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage -0.02940458 7.7625e-01 lowCoverage 1.0000e+00 lowCoverage 0.7188252 0.6414904 6.8953e-02 6 0.7493370 0.6630005 8.6336e-02 8.1249e-03 8.9629e-01 weaklyHypermeth 1.0156e-01 1.0000e+00 insignificant 1.8882e-02 9.8184e-01 weaklyHypermeth 2.6974e-01 1.0000e+00 insignificant 1.7729e-01 1.7771e-01 lowCoverage 1.0000e+00 lowCoverage 0.7188252 0.6818700 0.0160429 4 0.7493370 0.744888 0.0044493 5.0676e-01 4.7984e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 4.9858e-01 6.7594e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 0.03594319 7.2976e-01 lowCoverage 1.00000000 lowCoverage 0.6414904 0.6818700 -0.0648565 4 0.6630005 0.744888 -0.0818871 9.7383e-01 1.0334e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.9423e-01 1.4903e-01 lowCoverage 1.00000000 1.0000e+00 lowCoverage -0.1413455 3.5575e-01 lowCoverage 1.0000000 lowCoverage chr10 80394550 80395550 36729 ENSG00000223243 0.118771 236 6 0.069543 126 6 0.169898 176 7 0.0761450 317 7 0.073165 129 5 0.155025 305 7 0.0588023 168 6 0.074533 186 7 0.082471 174 7 0.069083 295 7 0.172171 173 7 0.1465842 175 6 0.039223 287 7 0.031721 121 3 0.037730 284 7 0.200113 96 7 0.1714286 40 4 0.068620 385 6 0.0000000 119 6 0.067179 283 7 0.151027 88 6 0.088786 211 7 0.215197 149 6 0.118367 52 5 0.122637 147 7 0.0873873 225 7 0.080645 142 6 0.032738 121 7 0.079305 112 6 0.0340292 240 7 0.0785297 170 7 0.175584 256 7 0.4460623 55 4 0.738862 87 6 0.4359217 94 3 0.4779762 61 6 0.5436508 40 4 0.4597638 152 7 0.0460544 385 7 0.145091 267 6 0.0203360 303 6 0.017854 344 6 0.090079 347 6 0.088503 0.036090 0.101113 0.0432292 0.051351 0.114291 0.0361284 0.052045 0.043199 0.052082 0.119570 0.092695 0.030432 0.057224 0.0337101 0.110896 0.2750903 0.061378 0.0000000 0.050725 0.099178 0.063532 0.125903 0.064776 0.107266 0.0515410 0.070319 0.017900 0.061262 0.0241522 0.0449786 0.121407 0.4473980 0.7936959 0.3990843 0.3303679 0.539711 0.3104744 0.032106 0.077874 0.0177823 0.012276 0.083789 5 0.0611043 0.0799791 -0.00714097 7 0.0929283 0.1033739 -0.01044564 0.879454 2.8636e-01 insignificant 1 1.000000 insignificant 0.578744 0.48155470 insignificant 1 1.00000 insignificant -1.1242e-02 0.581480 insignificant 1 insignificant 0.0611043 0.4907975 -0.42212049 6 0.0929283 0.5464843 -0.45355606 1.0000e+00 3.1311e-38 hypomethylated 1.0000e+00 1.5656e-35 hypomethylated 1.0000e+00 2.7153e-12 hypomethylated 1.0000e+00 2.7153e-09 hypomethylated -0.4229290 1.6406e-04 hypomethylated 6.0762e-03 hypomethylated 0.0611043 0.0407047 1.7355e-02 6 0.0929283 0.060257 0.0326709 8.6635e-02 9.1058e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.4893e-01 9.1114e-01 insignificant 1.0000e+00 1.000000 insignificant 0.03022746 3.0633e-01 insignificant 1.0000e+00 insignificant 0.0799791 0.4907975 -4.0854e-01 6 0.1033739 0.5464843 -4.4311e-01 1.0000e+00 4.2394e-23 hypomethylated 1.0000e+00 2.1197e-20 hypomethylated 1.0000e+00 3.9104e-10 hypomethylated 1.0000e+00 3.9104e-07 hypomethylated -4.1169e-01 1.4620e-04 hypomethylated 5.6231e-03 hypomethylated 0.0799791 0.0407047 0.0357396 6 0.1033739 0.060257 0.0431165 7.9805e-02 9.3402e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.3940e-02 8.0488e-01 insignificant 1.0000e+00 1.000000 insignificant 0.04146991 1.8913e-01 insignificant 1.00000000 insignificant 0.4907975 0.0407047 0.4414077 6 0.5464843 0.060257 0.4862269 3.0462e-14 1.0000e+00 hypermethylated 3.0462e-11 1.0000e+00 hypermethylated 2.5874e-07 1.0000e+00 hypermethylated 0.00025874 1.0000e+00 hypermethylated 0.4531564 4.4274e-05 hypermethylated 0.0040249 hypermethylated chr10 80606350 80607350 36755 ZMIZ1 ENSG00000108175 0.790072 43 3 0.655000 44 3 0.618095 47 3 0.7942995 45 3 0.635101 40 4 0.821258 51 4 0.9175926 53 5 0.773295 31 3 0.704167 46 3 0.666667 33 3 0.774405 63 4 0.6580688 37 4 0.811569 107 6 NA 0 0 0.749819 66 3 0.550000 16 1 0.6153846 39 4 0.666928 77 6 0.8346866 64 5 0.718750 47 4 0.883608 74 5 0.490079 25 2 0.794246 68 5 0.733333 48 4 0.763889 31 2 0.8577140 120 6 0.705769 44 4 0.534286 34 4 0.557143 26 3 0.8871795 91 6 0.8667727 116 6 0.853567 195 6 0.4895833 69 5 0.125000 38 3 0.4444444 11 0 0.0000000 22 3 0.4194597 63 6 0.4352941 121 6 0.4878788 30 4 0.800000 46 3 1.0000000 10 0 0.317857 36 3 0.779662 124 4 0.826607 0.630435 0.814700 0.9075943 0.674901 0.870397 0.9202899 0.806818 0.807971 0.913043 0.865631 0.682885 0.881293 NA 0.7641777 0.630435 0.7525084 0.493789 0.8085284 0.744565 0.893992 0.293478 0.753364 0.747412 0.619565 0.8312629 0.805686 0.789441 0.639752 0.8782609 0.8251383 0.835088 0.1458333 0.1086957 0.1263239 0.0466113 0.241221 0.1080563 0.560606 0.644269 0.9463043 0.276398 0.720000 0 0.7997893 0.8165138 -0.02638770 5 0.7735469 0.8285150 -0.05496812 0.788601 5.7870e-02 insignificant 1 1.000000 insignificant 0.453510 0.30871013 insignificant 1 1.00000 insignificant -2.0010e-02 0.674423 lowCoverage 1 lowCoverage 0.7997893 0.3549383 0.51119333 5 0.7735469 0.4380376 0.33550927 2.9221e-23 8.5629e-01 hypermethylated 2.2478e-21 1.0000e+00 hypermethylated 8.1423e-07 9.2584e-01 hypermethylated 5.0889e-05 1.0000e+00 hypermethylated 0.4049920 3.7901e-03 lowCoverage 8.8142e-02 lowCoverage 0.7997893 0.6463415 1.8941e-01 5 0.7735469 0.668011 0.1055358 2.4337e-05 9.2430e-01 weaklyHypermeth 1.4316e-03 1.0000e+00 weaklyHypermeth 3.1823e-01 4.7744e-01 insignificant 1.0000e+00 1.000000 insignificant 0.04687598 7.2203e-01 lowCoverage 1.0000e+00 lowCoverage 0.8165138 0.3549383 4.5216e-01 5 0.8285150 0.4380376 3.9048e-01 9.3178e-22 6.6505e-01 hypermethylated 7.7648e-20 1.0000e+00 hypermethylated 1.7744e-05 9.1455e-01 hypermethylated 7.0976e-04 1.0000e+00 hypermethylated 4.2500e-01 2.0966e-03 lowCoverage 5.5172e-02 lowCoverage 0.8165138 0.6463415 0.1756603 5 0.8285150 0.668011 0.1605039 1.1355e-05 9.9413e-01 weaklyHypermeth 7.5697e-04 1.0000e+00 weaklyHypermeth 2.8143e-01 8.2985e-01 insignificant 1.0000e+00 1.000000 insignificant 0.06688596 6.2457e-01 lowCoverage 1.00000000 lowCoverage 0.3549383 0.6463415 -0.2387153 5 0.4380376 0.668011 -0.2299735 8.9639e-01 3.4898e-05 hypomethylated 1.0000e+00 1.0575e-03 hypomethylated 9.7019e-01 5.9766e-04 hypomethylated 1.00000000 2.4903e-02 hypomethylated -0.3581160 4.3626e-02 lowCoverage 0.7163465 lowCoverage chr10 82214350 82215350 36797 TSPAN14 ENSG00000108219 0.194363 266 6 0.341764 127 6 0.331085 69 6 0.1143879 162 6 0.191880 64 6 0.448988 229 6 0.2974720 125 6 0.313037 124 6 0.264245 67 6 0.251120 100 6 0.381726 204 6 0.5040675 54 6 0.093783 113 5 0.121053 39 3 0.270689 148 6 0.278355 45 4 0.1518065 75 4 0.198201 293 6 0.1565899 173 6 0.131497 241 6 0.356694 102 6 0.068855 63 5 0.354798 149 6 0.243996 87 6 0.115040 277 6 0.1448682 213 6 0.188987 104 6 0.277778 24 1 0.294400 167 6 0.1334003 290 6 0.1885182 273 6 0.469544 280 6 0.0377215 131 6 0.137406 176 6 0.0000000 94 3 0.0484575 155 6 0.2401099 89 6 0.0454521 233 6 0.0462921 322 6 0.191878 265 6 0.0775645 190 6 0.153366 261 6 0.088286 234 6 0.184390 0.244624 0.304106 0.1281812 0.199949 0.343132 0.2776767 0.238245 0.233252 0.264162 0.372504 0.460815 0.102826 0.202541 0.1417617 0.308229 0.1627361 0.176790 0.1384629 0.113278 0.367263 0.059245 0.342346 0.267721 0.133579 0.1654555 0.194357 0.159074 0.270710 0.1501903 0.1465858 0.470592 0.0358400 0.1166849 0.0500499 0.0401834 0.283171 0.0505763 0.034848 0.174230 0.0708872 0.166108 0.073290 5 0.2189110 0.2372965 -0.02433021 6 0.4188826 0.2330115 0.18587117 0.085158 6.1832e-01 insignificant 1 1.000000 insignificant 0.048381 0.98124274 inconclusive 1 1.00000 insignificant 1.5399e-02 0.721050 insignificant 1 insignificant 0.2186235 0.0751708 0.14545633 6 0.3358659 0.0639182 0.27194771 1.1054e-06 9.8484e-01 weaklyHypermeth 1.9393e-05 1.0000e+00 weaklyHypermeth 1.0377e-05 9.9415e-01 weaklyHypermeth 4.5117e-04 1.0000e+00 weaklyHypermeth 0.1669477 3.3111e-03 weaklyHypermeth 8.0759e-02 weaklyHypermeth 0.2177598 0.1069182 1.0765e-01 6 0.2251769 0.119472 0.1057047 3.1440e-04 9.9988e-01 weaklyHypermeth 1.4971e-02 1.0000e+00 weaklyHypermeth 2.6352e-04 9.9639e-01 weaklyHypermeth 2.3956e-02 1.000000 weaklyHypermeth 0.14032808 2.3126e-03 weaklyHypermeth 1.8045e-01 insignificant 0.2374136 0.0751708 1.7679e-01 6 0.2662988 0.0639182 2.0238e-01 2.3412e-07 8.6601e-01 weaklyHypermeth 5.7102e-06 1.0000e+00 weaklyHypermeth 8.1380e-05 6.3620e-01 weaklyHypermeth 2.7127e-03 1.0000e+00 weaklyHypermeth 1.5155e-01 9.2455e-03 weaklyHypermeth 1.9671e-01 insignificant 0.2367509 0.1069182 0.1284813 6 0.2392534 0.119472 0.1197813 6.2424e-04 7.1700e-01 weaklyHypermeth 2.7141e-02 1.0000e+00 weaklyHypermeth 4.3814e-03 7.7014e-01 weaklyHypermeth 2.4341e-01 1.000000 insignificant 0.12492906 1.1938e-02 weaklyHypermeth 0.66322089 insignificant 0.0752566 0.1069182 -0.0430224 6 0.0745712 0.119472 -0.0449009 6.5408e-01 5.6708e-02 insignificant 1.0000e+00 6.5939e-01 insignificant 7.1844e-01 2.5761e-01 insignificant 1.00000000 1.0000e+00 insignificant -0.0266196 5.6811e-01 insignificant 1.0000000 insignificant chr10 82242150 82243150 36802 TSPAN14 ENSG00000108219 0.745896 290 8 0.573798 232 8 0.586080 150 8 0.7397247 267 8 0.815976 88 8 0.849002 249 8 0.7348031 172 8 0.741927 136 8 0.772143 117 8 0.849626 128 8 0.777157 264 8 0.7729275 76 8 0.700267 132 8 0.844444 62 5 0.716811 109 8 0.708498 93 8 0.7089544 537 7 0.773008 174 8 0.7421352 142 8 0.803937 158 8 0.912302 75 8 0.713622 53 4 0.792593 187 8 0.710582 85 6 0.752381 55 8 0.6990991 249 8 0.738946 130 6 0.588889 35 3 0.813353 81 8 0.7652135 191 8 0.8065618 190 8 0.642795 230 8 0.6040320 142 8 0.560010 162 8 0.6213958 304 8 0.6673576 57 6 0.7238194 147 8 0.8225942 208 8 0.7336216 364 8 0.644087 388 8 0.7941681 456 8 0.578276 205 8 0.783606 315 8 0.769159 0.737632 0.747421 0.8150372 0.858632 0.862706 0.7641475 0.808188 0.801638 0.837779 0.791108 0.791903 0.792397 0.833530 0.7474055 0.733797 0.7564424 0.806172 0.7870877 0.825181 0.893244 0.758213 0.777422 0.843578 0.764277 0.7787749 0.760146 0.780648 0.831049 0.7972842 0.8277542 0.819153 0.6391172 0.7214949 0.6351099 0.7000630 0.748018 0.8397652 0.887474 0.837361 0.8260762 0.760671 0.810390 5 0.7883110 0.8187060 -0.01074842 8 0.6947538 0.7073612 -0.01260737 0.947078 3.4292e-01 insignificant 1 1.000000 insignificant 0.902595 0.32253737 insignificant 1 1.00000 insignificant 3.1611e-03 0.915462 insignificant 1 insignificant 0.7883110 0.7078431 0.10252351 8 0.6947538 0.5511883 0.14356552 4.9566e-07 9.9965e-01 weaklyHypermeth 9.7189e-06 1.0000e+00 weaklyHypermeth 4.2563e-03 9.9899e-01 weaklyHypermeth 7.8820e-02 1.0000e+00 weaklyHypermeth 0.0813209 9.4968e-02 insignificant 1.0000e+00 insignificant 0.7883110 0.8466435 -2.9074e-02 8 0.6947538 0.657842 0.0369120 8.8713e-01 3.8643e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 7.3404e-01 2.4136e-01 insignificant 1.0000e+00 1.000000 insignificant 0.04110398 3.9857e-01 insignificant 1.0000e+00 insignificant 0.8187060 0.7078431 1.1238e-01 8 0.7073612 0.5511883 1.5617e-01 2.3998e-05 9.9985e-01 weaklyHypermeth 4.3632e-04 1.0000e+00 weaklyHypermeth 8.5609e-03 9.9955e-01 weaklyHypermeth 1.4510e-01 1.0000e+00 insignificant 7.8160e-02 1.2120e-01 insignificant 1.0000e+00 insignificant 0.8187060 0.8466435 -0.0226932 8 0.7073612 0.657842 0.0495194 7.8287e-01 1.9011e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.3540e-01 5.7705e-01 insignificant 1.0000e+00 1.000000 insignificant 0.03794291 4.5779e-01 insignificant 1.00000000 insignificant 0.7078431 0.8466435 -0.1490561 8 0.5511883 0.657842 -0.1066535 9.9997e-01 8.0423e-04 weaklyHypometh 1.0000e+00 1.6413e-02 weaklyHypometh 9.9997e-01 2.1943e-02 weaklyHypometh 1.00000000 3.7192e-01 insignificant -0.0402169 4.9787e-01 insignificant 1.0000000 insignificant chr10 82248050 82249050 36803 TSPAN14 ENSG00000108219 0.716606 133 4 0.736214 100 6 0.617682 59 5 0.5670988 128 4 0.503824 48 5 0.718978 208 5 0.7517677 44 4 0.640212 98 5 0.651286 47 4 0.743208 48 5 0.797609 150 5 0.7400000 31 3 0.487273 101 5 0.833333 14 2 0.660301 76 4 0.318182 24 2 0.3333333 28 3 0.562513 117 3 0.3742154 76 4 0.697550 168 5 0.779798 50 5 0.265530 51 4 0.811839 68 4 0.682068 40 4 0.690055 167 4 0.5695482 132 5 0.541918 74 5 0.686667 17 1 0.682771 79 5 0.6243318 202 5 0.5806729 197 5 0.797754 187 5 0.0133929 145 5 0.000000 113 4 0.0000000 99 4 0.0000000 151 5 0.0057143 102 5 0.0057143 201 5 0.3388889 117 5 0.222546 131 4 0.5883007 112 4 0.410144 76 3 0.451042 141 4 0.715928 0.613304 0.541930 0.5895182 0.361888 0.649189 0.6676644 0.544546 0.485787 0.682449 0.764139 0.689277 0.336597 0.582619 0.5601241 0.342643 0.4228402 0.555559 0.3191512 0.630885 0.781804 0.278315 0.704939 0.562466 0.549191 0.5075873 0.467725 0.607925 0.698926 0.5480983 0.5185459 0.753212 0.0127997 0.0000000 0.0000000 0.0000000 0.010190 0.0021978 0.247669 0.191291 0.4325860 0.319346 0.378001 2 0.6411314 0.6265823 0.01687154 5 0.7161270 0.7017832 0.01434373 0.179568 9.1220e-01 insignificant 1 1.000000 insignificant 0.725330 0.71666626 insignificant 1 1.00000 insignificant -2.0187e-02 0.714456 lowCoverage 1 lowCoverage 0.6400709 0.0049322 0.63617323 5 0.7161270 0.0035430 0.71258397 2.9842e-41 1.0000e+00 hypermethylated 5.9685e-39 1.0000e+00 hypermethylated 2.3895e-12 1.0000e+00 hypermethylated 3.9824e-10 1.0000e+00 hypermethylated 0.6184224 1.4853e-13 lowCoverage 1.3502e-11 lowCoverage 0.6398581 0.3535529 2.8004e-01 4 0.6593523 0.380099 0.2792534 1.8752e-12 1.0000e+00 lowCoverage 6.2506e-10 1.0000e+00 lowCoverage 6.3450e-06 1.0000e+00 lowCoverage 1.1827e-03 1.000000 lowCoverage 0.22037500 1.6343e-02 lowCoverage 5.8369e-01 lowCoverage 0.6259905 0.0049383 6.2193e-01 5 0.6421399 0.0042516 6.3789e-01 2.2108e-31 1.0000e+00 hypermethylated 3.6846e-29 1.0000e+00 hypermethylated 1.9726e-12 1.0000e+00 hypermethylated 3.2876e-10 1.0000e+00 hypermethylated 6.3861e-01 1.1212e-08 lowCoverage 8.0083e-07 lowCoverage 0.6259905 0.3535529 0.2565936 4 0.6421399 0.380099 0.2620409 2.1794e-08 1.0000e+00 lowCoverage 2.4216e-06 1.0000e+00 lowCoverage 1.0464e-05 1.0000e+00 lowCoverage 1.7440e-03 1.000000 lowCoverage 0.24056175 1.1335e-02 lowCoverage 0.66322089 lowCoverage 0.0049383 0.3535529 -0.3504906 4 0.0042516 0.380099 -0.3758474 1.0000e+00 6.7793e-14 lowCoverage 1.0000e+00 6.1630e-12 lowCoverage 1.0000e+00 4.1320e-07 lowCoverage 1.00000000 1.0330e-04 lowCoverage -0.3980474 2.7557e-03 lowCoverage 0.1020622 lowCoverage chr10 82248150 82249150 36804 TSPAN14 ENSG00000108219 0.716606 133 4 0.736214 100 6 0.617682 59 5 0.5670988 128 4 0.503824 48 5 0.718978 208 5 0.7517677 44 4 0.640212 98 5 0.651286 47 4 0.743208 48 5 0.797609 150 5 0.7400000 31 3 0.487273 101 5 0.833333 14 2 0.660301 76 4 0.318182 24 2 0.3333333 28 3 0.562513 117 3 0.3742154 76 4 0.697550 168 5 0.779798 50 5 0.265530 51 4 0.811839 68 4 0.682068 40 4 0.690055 167 4 0.5695482 132 5 0.541918 74 5 0.686667 17 1 0.682771 79 5 0.6243318 202 5 0.5806729 197 5 0.797754 187 5 0.0133929 145 5 0.000000 113 4 0.0000000 99 4 0.0000000 151 5 0.0057143 102 5 0.0057143 201 5 0.3388889 117 5 0.222546 131 4 0.5883007 112 4 0.410144 76 3 0.451042 141 4 0.715928 0.613304 0.541930 0.5895182 0.361888 0.649189 0.6676644 0.544546 0.485787 0.682449 0.764139 0.689277 0.336597 0.582619 0.5601241 0.342643 0.4228402 0.555559 0.3191512 0.630885 0.781804 0.278315 0.704939 0.562466 0.549191 0.5075873 0.467725 0.607925 0.698926 0.5480983 0.5185459 0.753212 0.0127997 0.0000000 0.0000000 0.0000000 0.010190 0.0021978 0.247669 0.191291 0.4325860 0.319346 0.378001 2 0.6411314 0.6265823 0.01687154 5 0.7161270 0.7017832 0.01434373 0.179568 9.1220e-01 insignificant 1 1.000000 insignificant 0.725330 0.71666626 insignificant 1 1.00000 insignificant -2.0187e-02 0.714456 lowCoverage 1 lowCoverage 0.6400709 0.0049322 0.63617323 5 0.7161270 0.0035430 0.71258397 2.9842e-41 1.0000e+00 hypermethylated 5.9685e-39 1.0000e+00 hypermethylated 2.3895e-12 1.0000e+00 hypermethylated 3.9824e-10 1.0000e+00 hypermethylated 0.6184224 1.4853e-13 lowCoverage 1.3502e-11 lowCoverage 0.6398581 0.3535529 2.8004e-01 4 0.6593523 0.380099 0.2792534 1.8752e-12 1.0000e+00 lowCoverage 6.2506e-10 1.0000e+00 lowCoverage 6.3450e-06 1.0000e+00 lowCoverage 1.1827e-03 1.000000 lowCoverage 0.22037500 1.6343e-02 lowCoverage 5.8369e-01 lowCoverage 0.6259905 0.0049383 6.2193e-01 5 0.6421399 0.0042516 6.3789e-01 2.2108e-31 1.0000e+00 hypermethylated 3.6846e-29 1.0000e+00 hypermethylated 1.9726e-12 1.0000e+00 hypermethylated 3.2876e-10 1.0000e+00 hypermethylated 6.3861e-01 1.1212e-08 lowCoverage 8.0083e-07 lowCoverage 0.6259905 0.3535529 0.2565936 4 0.6421399 0.380099 0.2620409 2.1794e-08 1.0000e+00 lowCoverage 2.4216e-06 1.0000e+00 lowCoverage 1.0464e-05 1.0000e+00 lowCoverage 1.7440e-03 1.000000 lowCoverage 0.24056175 1.1335e-02 lowCoverage 0.66322089 lowCoverage 0.0049383 0.3535529 -0.3504906 4 0.0042516 0.380099 -0.3758474 1.0000e+00 6.7793e-14 lowCoverage 1.0000e+00 6.1630e-12 lowCoverage 1.0000e+00 4.1320e-07 lowCoverage 1.00000000 1.0330e-04 lowCoverage -0.3980474 2.7557e-03 lowCoverage 0.1020622 lowCoverage chr10 91121850 91122850 36942 ENSG00000220025 0.726316 79 4 0.797517 125 5 0.412500 19 3 0.7277778 89 5 0.375000 24 4 0.761412 158 4 0.4791667 31 4 0.743386 111 4 0.533654 44 4 0.666667 36 4 0.724951 169 6 0.6041667 15 0 0.765863 71 4 0.581044 53 4 0.776667 47 4 0.416667 12 0 1.0000000 4 0 0.735604 75 4 0.5694444 41 4 0.793676 95 5 0.333333 4 0 0.562500 15 0 0.685714 31 4 0.866667 21 3 1.000000 17 1 0.7416203 209 5 0.750000 13 0 0.750000 5 0 0.813846 49 4 0.7168987 166 5 0.7953893 143 5 0.717161 137 5 0.7600496 89 4 0.643636 42 4 0.7919390 77 4 0.7500000 4 0 0.4809524 32 5 0.7755268 136 5 0.6403175 46 5 0.704875 148 5 0.7956522 102 5 0.732143 31 4 0.761772 110 5 0.644506 0.766581 0.426316 0.6877193 0.374269 0.644854 0.4661654 0.615892 0.556680 0.686160 0.619982 0.590643 0.653666 0.590033 0.7090643 0.456140 1.0000000 0.668731 0.6608187 0.744054 0.443812 0.614035 0.588972 0.812865 1.000000 0.6734068 0.771930 0.824561 0.770310 0.6852602 0.7064649 0.663338 0.6321651 0.5381180 0.6991171 0.7192982 0.314119 0.6791440 0.600780 0.669951 0.7460301 0.699248 0.648006 0 0.6638331 0.7135802 -0.04756756 4 0.7298508 0.7860602 -0.05620934 0.941660 3.0334e-03 lowCoverage 1 0.505568 lowCoverage 0.995934 0.00131321 lowCoverage 1 0.43774 lowCoverage -6.8187e-02 0.259301 lowCoverage 1 lowCoverage 0.6638331 0.6763158 0.00289048 4 0.7298508 0.7525283 -0.02267748 7.4300e-01 3.1122e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.7045e-01 2.7336e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0407767 5.1359e-01 lowCoverage 1.0000e+00 lowCoverage 0.6648690 0.7322654 -3.4110e-02 4 0.7973881 0.710778 0.0866104 9.9914e-01 3.5283e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.4636e-01 6.0972e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage -0.06737782 1.4515e-01 lowCoverage 1.0000e+00 lowCoverage 0.7135802 0.6763158 5.0413e-02 4 0.7860602 0.7525283 3.3532e-02 1.0501e-01 9.3237e-01 lowCoverage 9.6337e-01 1.0000e+00 lowCoverage 1.1887e-01 9.3527e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 2.7410e-02 6.9215e-01 lowCoverage 1.0000e+00 lowCoverage 0.7135802 0.7333333 0.0111220 4 0.7860602 0.781037 0.0050232 4.1809e-01 6.1669e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 2.5877e-01 9.8005e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 0.00080902 9.8822e-01 lowCoverage 1.00000000 lowCoverage 0.6763158 0.7333333 -0.0383821 5 0.7525283 0.781037 -0.0285087 9.6727e-01 5.1405e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.6581e-01 6.8753e-01 insignificant 1.00000000 1.0000e+00 insignificant -0.0266011 6.4520e-01 lowCoverage 1.0000000 lowCoverage chr10 93048050 93049050 36973 PCGF5 ENSG00000180628 0.877436 99 5 0.673333 65 5 0.851754 72 5 0.8125000 58 2 0.864615 38 5 0.852609 154 5 0.7418301 71 5 0.847586 87 5 0.920615 78 5 0.891326 95 5 0.900617 140 5 0.8696154 36 5 0.886111 86 5 0.500000 4 0 0.879798 62 5 0.773333 28 3 0.8083333 34 3 0.932692 87 4 0.9308156 116 5 0.733826 165 5 0.797609 57 5 0.914203 52 2 0.920779 67 5 0.888918 58 4 0.917949 34 2 0.8574286 94 5 0.838920 88 5 0.895714 45 5 0.773797 45 3 0.8752011 131 5 0.9106481 87 5 0.800936 186 5 0.9386667 88 5 0.902500 98 5 1.0000000 127 5 0.8484848 27 2 0.9666667 67 5 0.9103297 95 5 0.8563823 85 5 0.930342 114 5 0.9473684 62 3 0.889524 61 5 0.950256 62 2 0.836630 0.676871 0.865173 0.8587547 0.872857 0.835271 0.7155579 0.893392 0.929136 0.841920 0.917040 0.836071 0.881448 0.666550 0.9313492 0.760238 0.7866071 0.889112 0.9209407 0.727989 0.859270 0.898503 0.921429 0.894867 0.950733 0.8318061 0.795414 0.887194 0.810485 0.8563129 0.9090939 0.798979 0.8833333 0.8648214 1.0000000 0.8685065 0.974603 0.9477394 0.800804 0.929579 0.9210526 0.886599 0.906429 2 0.8450794 0.8612288 -0.01407438 5 0.8489934 0.8626185 -0.01362503 0.916714 3.6462e-01 insignificant 1 1.000000 insignificant 0.940824 0.17068155 insignificant 1 1.00000 insignificant -3.8571e-02 0.172764 lowCoverage 1 lowCoverage 0.8450794 0.9442231 -0.09178082 5 0.8489934 0.9444007 -0.09540728 9.9999e-01 7.0995e-04 weaklyHypometh 1.0000e+00 1.7749e-01 insignificant 9.9975e-01 1.8376e-03 weaklyHypometh 1.0000e+00 4.5940e-01 insignificant -0.1003373 5.6452e-03 lowCoverage 1.2272e-01 lowCoverage 0.8450794 0.8802083 -4.5416e-02 5 0.8489934 0.902587 -0.0535938 9.9154e-01 2.7001e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9197e-01 5.2818e-03 weaklyHypometh 1.0000e+00 0.586865 insignificant -0.08733726 8.3864e-03 lowCoverage 4.1932e-01 lowCoverage 0.8612288 0.9442231 -7.7577e-02 5 0.8626185 0.9444007 -8.1782e-02 9.9984e-01 2.8472e-03 weaklyHypometh 1.0000e+00 7.1181e-01 insignificant 9.9915e-01 1.9931e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -6.1766e-02 4.1281e-02 lowCoverage 6.3766e-01 lowCoverage 0.8612288 0.8802083 -0.0322000 5 0.8626185 0.902587 -0.0399688 9.7776e-01 9.2094e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8410e-01 9.1711e-02 insignificant 1.0000e+00 1.000000 insignificant -0.04876608 6.6370e-02 lowCoverage 1.00000000 lowCoverage 0.9442231 0.8802083 0.0445932 5 0.9444007 0.902587 0.0418135 2.3745e-01 9.4532e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.4758e-01 6.8682e-01 insignificant 1.00000000 1.0000e+00 insignificant 0.0130001 6.5669e-01 lowCoverage 1.0000000 lowCoverage chr10 97044850 97045850 37073 PDLIM1 ENSG00000107438 0.2446268 351 9 0.3003804 364 14 0.3628593 352 15 0.540941 296 8 0.566924 379 15 0.269778 424 15 0.1678955 679 15 0.560192 303 15 0.394756 316 12 0.165064 466 12 0.180188 652 15 0.078760 545 12 0.465612 357 12 0.410714 32 4 0.713814 374 12 0.092092 477 15 0.311049 185 8 0.084048 608 4 0.509690 492 12 0.620726 196 8 0.20249 126 11 0.3688572 100 4 0.286162 306 12 0.116353 127 11 0.877960 328 8 0.8961122 285 12 0.3288876 196 12 0.468750 55 5 0.299046 448 12 0.9556899 272 10 0.4833715 350 14 0.083947 293 11 0.0418459 445 15 0.011242 472 12 0.000000 44 4 0.0264214 409 8 0.038460 199 13 0.0128679 573 14 0.421628 305 10 0.2243189 357 15 0.399958 284 6 0.528105 225 4 0.286166 226 8 0.332785 0.2953271 0.460255 0.4102736 0.691713 0.363849 0.190217 0.676357 0.5546046 0.275916 0.324431 0.141412 0.3966412 0.634458 0.686094 0.161874 0.414159 0.148682 0.5144566 0.6095136 0.159642 0.385135 0.272715 0.2093137 0.782815 0.8791278 0.3262671 0.664060 0.385303 0.9318757 0.5129276 0.109288 0.0483978 0.022295 0.0037148 0.0096931 0.0799370 0.0199303 0.337715 0.3006405 0.5511451 0.5517878 0.2418953 4 0.296584 0.473629 -0.16912092 12 0.202948 0.540530 -0.33758239 1.0000e+00 3.2283e-05 weaklyHypometh 1.000000 0.0080707 weaklyHypometh 0.999999 0.52028687 insignificant 1 1.00000 insignificant -0.09529704 0.3439337 insignificant 1 insignificant 0.296811 0.0317460 0.2769732 12 0.279054 0.0280987 0.2509549 1.4124e-21 1.0000e+00 hypermethylated 6.7257e-20 1.00000000 hypermethylated 3.1778e-24 1.0000e+00 hypermethylated 3.1778e-21 1.000000 hypermethylated 0.3301994 2.8234e-07 hypermethylated 2.1718e-05 hypermethylated 0.296849 0.3779528 -0.0198705 5 0.297657 0.313249 -0.01559191 5.4546e-01 8.9174e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 3.8195e-01 3.1358e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.02002942 7.7608e-01 insignificant 1.0000000 insignificant 0.473391 0.0317460 4.4312e-01 12 0.493229 0.0280987 0.46513067 5.6054e-20 1.00000000 hypermethylated 3.2973e-18 1.000000 hypermethylated 1.3383e-19 1.00000000 hypermethylated 9.5757e-17 1.000000 hypermethylated 0.4254964 5.0685e-04 hypermethylated 1.8812e-02 hypermethylated 0.473208 0.3779528 0.1363426 5 0.459445 0.313249 0.14619558 4.6163e-03 9.9930e-01 weaklyHypermeth 1.1259e-01 1.00000000 insignificant 1.3424e-01 0.82584600 insignificant 1.0000e+00 1.000000 insignificant 7.5268e-02 4.7482e-01 insignificant 1.000000 insignificant 0.0317609 0.3779528 -0.3353880 8 0.0299720 0.313249 -0.28327713 1.0000e+00 2.4673e-16 hypomethylated 1.0000e+00 2.0561e-14 hypomethylated 1.0000e+00 3.3484e-12 hypomethylated 1.0000e+00 1.6742e-09 hypomethylated -0.3502288 2.5570e-03 weaklyHypometh 1.1906e-01 insignificant chr10 97283150 97284150 37097 SORBS1 ENSG00000095637 0.7376334 355 11 0.6582243 171 10 0.7313668 141 6 0.697155 252 10 0.747879 108 6 0.719423 614 11 0.6837093 131 6 0.799575 110 6 0.816091 116 6 0.700631 118 8 0.771721 312 11 0.837138 126 6 0.856857 153 10 NA 0 0 0.737028 132 8 0.700617 88 5 0.742127 100 5 0.833851 224 10 0.771718 206 11 0.738192 466 11 0.68600 110 10 0.6322679 134 9 0.778768 220 11 0.811096 115 9 0.754563 90 9 0.7167219 244 11 0.7202690 178 11 0.778974 93 6 0.742045 106 6 0.6714848 257 11 0.6952614 214 11 0.709303 676 11 0.6046734 204 7 0.681380 153 10 0.637248 231 9 0.6397078 68 7 0.734355 137 11 0.6991304 194 11 0.772797 270 11 0.7743547 369 11 0.773080 219 10 0.767988 173 10 0.777092 284 10 0.762729 0.7013982 0.736858 0.7152664 0.762503 0.737904 0.764159 0.787255 0.7810029 0.825150 0.789627 0.806874 0.7962087 NA 0.718566 0.775374 0.787026 0.751787 0.7637364 0.7669328 0.746127 0.752410 0.754749 0.7391673 0.655409 0.7456312 0.7951142 0.814962 0.732012 0.7468049 0.7576625 0.710233 0.6897964 0.639567 0.7371854 0.5911651 0.7246345 0.7062953 0.843015 0.7531941 0.7496255 0.7065181 0.7270284 5 0.764466 0.745999 0.02514259 11 0.744664 0.711764 0.03289968 6.8141e-02 9.9507e-01 insignificant 1.000000 1.0000000 insignificant 0.149820 0.95781965 insignificant 1 1.00000 insignificant 0.02689868 0.1800309 insignificant 1 insignificant 0.764481 0.6838906 0.0714791 11 0.744179 0.6748669 0.0693121 4.3085e-06 9.9874e-01 weaklyHypermeth 7.1808e-05 1.00000000 weaklyHypermeth 3.3203e-04 9.9997e-01 weaklyHypermeth 7.9054e-03 1.000000 weaklyHypermeth 0.0855457 4.3932e-03 weaklyHypermeth 1.0460e-01 insignificant 0.764481 0.7832700 -0.0019876 10 0.744179 0.763208 -0.01902925 8.0341e-01 1.5391e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.4753e-01 3.3577e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.02143414 1.1316e-01 insignificant 1.0000000 insignificant 0.746299 0.6838906 4.6104e-02 11 0.721925 0.6748669 0.04705795 5.6559e-03 0.98778069 weaklyHypermeth 5.3720e-02 1.000000 weaklyHypermeth 9.7708e-03 0.99877928 weaklyHypermeth 1.4369e-01 1.000000 insignificant 0.0586470 3.5087e-02 weaklyHypermeth 5.1599e-01 insignificant 0.746299 0.7832700 -0.0293456 10 0.721925 0.763208 -0.04128344 9.8245e-01 3.0890e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant 9.3193e-01 0.13549700 insignificant 1.0000e+00 1.000000 insignificant -4.8333e-02 7.3098e-03 weaklyHypometh 0.291766 insignificant 0.6838906 0.7832700 -0.0705309 10 0.6748669 0.763208 -0.08834139 9.9955e-01 1.3903e-04 weaklyHypometh 1.0000e+00 3.0224e-03 weaklyHypometh 9.9839e-01 2.5638e-03 weaklyHypometh 1.0000e+00 6.2531e-02 weaklyHypometh -0.1069799 2.6192e-03 weaklyHypometh 1.1906e-01 insignificant chr10 98438550 98439550 37113 PIK3AP1 ENSG00000155629 0.8571169 158 8 0.7833039 90 5 0.5188492 58 5 0.818306 129 5 0.790601 123 8 0.743437 95 8 0.7064815 114 8 0.822985 85 8 0.694281 99 8 0.631360 105 7 0.707156 130 8 0.780556 68 7 0.692609 188 8 0.762426 133 8 0.719761 128 7 0.705357 78 7 0.626736 76 5 0.657912 262 7 0.714087 58 4 0.715729 54 3 0.76905 26 3 0.8571429 10 0 0.742542 128 7 0.605864 38 5 0.789764 108 6 0.6666667 63 5 0.7623225 60 2 0.772619 39 4 0.686286 115 8 0.6448091 84 5 0.8282517 48 5 0.755929 59 3 0.5853920 138 8 0.684722 69 5 0.591534 68 5 0.7607143 35 4 0.687615 80 8 0.5738889 55 3 0.690043 125 8 0.7975724 103 4 0.722299 141 8 0.775452 83 6 0.747254 110 8 0.847967 0.7399711 0.584957 0.7824972 0.726803 0.696191 0.666622 0.778414 0.6728424 0.673293 0.669886 0.733754 0.7375396 0.716220 0.696601 0.682392 0.593009 0.712921 0.7477152 0.7181474 0.736037 0.781801 0.781483 0.5579335 0.728774 0.6434343 0.7005582 0.766955 0.673943 0.7163874 0.8231385 0.648492 0.5702075 0.638215 0.6222944 0.7231169 0.6208387 0.6998316 0.793251 0.7200312 0.7358369 0.7456402 0.6978666 2 0.727925 0.722365 0.01703397 5 0.762869 0.705971 0.05689820 3.9400e-01 8.3407e-01 insignificant 1.000000 1.0000000 insignificant 0.674134 0.31067587 insignificant 1 1.00000 insignificant -0.01765129 0.5325320 lowCoverage 1 lowCoverage 0.728129 0.6382022 0.0976633 6 0.786766 0.5578141 0.2289520 1.1809e-03 9.9926e-01 weaklyHypermeth 1.2836e-02 1.00000000 weaklyHypermeth 5.1200e-02 9.9853e-01 insignificant 4.8415e-01 1.000000 insignificant 0.0751414 6.3879e-02 insignificant 8.4052e-01 insignificant 0.727518 0.7419929 -0.0015482 8 0.739381 0.739537 -0.00015594 7.3917e-01 1.7378e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.5345e-01 2.0559e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.02407158 3.7036e-01 insignificant 1.0000000 insignificant 0.723871 0.6382022 8.9671e-02 5 0.739847 0.5578141 0.18203276 1.1624e-02 0.99873835 weaklyHypermeth 1.0021e-01 1.000000 insignificant 1.9063e-02 0.99985310 weaklyHypermeth 2.2968e-01 1.000000 insignificant 0.0927926 3.2842e-02 lowCoverage 4.9760e-01 lowCoverage 0.724183 0.7419929 -0.0251512 5 0.729654 0.739537 -0.00988264 7.3811e-01 2.4554e-01 insignificant 1.0000e+00 1.00000000 insignificant 4.3843e-01 0.32349572 insignificant 1.0000e+00 1.000000 insignificant -6.4203e-03 8.2714e-01 lowCoverage 1.000000 lowCoverage 0.6410835 0.7419929 -0.1107781 6 0.6817728 0.739537 -0.05776395 9.9397e-01 7.6167e-04 weaklyHypometh 1.0000e+00 1.2090e-02 weaklyHypometh 9.9161e-01 1.6801e-02 weaklyHypometh 1.0000e+00 2.5338e-01 insignificant -0.0992129 2.4813e-02 weaklyHypometh 4.2781e-01 insignificant chr10 99048250 99049250 37120 ENSG00000210818 0.7456866 315 10 0.7444754 160 8 0.7253463 137 10 0.832910 210 10 0.809163 71 8 0.796114 343 10 0.6598718 86 7 0.742942 137 8 0.796242 56 5 0.859583 110 8 0.814441 275 10 0.746451 66 5 0.706069 139 9 0.682143 37 5 0.820471 144 10 0.694444 52 6 0.525556 57 5 0.701557 196 10 0.771189 197 10 0.678844 255 9 0.74468 70 5 0.8713805 38 2 0.775745 189 10 0.751970 77 6 0.808730 48 6 0.7816506 186 10 0.7058275 107 5 0.791667 40 5 0.708170 134 10 0.7107080 227 10 0.7888664 199 8 0.563193 319 10 0.6368079 138 8 0.684416 136 10 0.633078 236 10 0.9224490 35 3 0.561186 123 8 0.7257863 240 9 0.774901 286 10 0.8531906 285 10 0.755392 198 10 0.834971 307 10 0.769746 297 10 0.797261 0.7608678 0.746746 0.8551250 0.880714 0.828159 0.750255 0.783634 0.8863740 0.824470 0.840444 0.811424 0.7662073 0.734225 0.846232 0.732372 0.633654 0.808216 0.8373521 0.7255725 0.811436 0.910908 0.775199 0.8140922 0.910229 0.7576155 0.7252727 0.816573 0.801606 0.7790223 0.8031976 0.810459 0.7864993 0.706328 0.6446986 0.9429361 0.7197520 0.7748109 0.850509 0.8678515 0.8086831 0.8604546 0.8555598 5 0.781137 0.784578 -0.00309239 9 0.745691 0.749706 -0.00401494 6.5162e-01 5.4469e-01 insignificant 1.000000 1.0000000 insignificant 0.850479 0.51017028 insignificant 1 1.00000 insignificant -0.00754044 0.7885227 insignificant 1 insignificant 0.781137 0.7059471 0.0802201 10 0.745691 0.5538507 0.1918402 5.4306e-05 1.0000e+00 weaklyHypermeth 7.2408e-04 1.00000000 weaklyHypermeth 8.3958e-02 9.8838e-01 insignificant 7.2377e-01 1.000000 insignificant 0.0487209 3.9880e-01 insignificant 1.0000e+00 insignificant 0.781137 0.8572469 -0.0515048 10 0.745691 0.749091 -0.00340060 9.9958e-01 9.0925e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9408e-01 5.0091e-02 insignificant 1.0000e+00 1.0000000 insignificant -0.05496515 5.6976e-02 insignificant 0.7913311 insignificant 0.784578 0.7059471 8.5797e-02 9 0.749706 0.5538507 0.19585511 1.9887e-05 0.99924899 weaklyHypermeth 2.8822e-04 1.000000 weaklyHypermeth 2.8180e-02 0.99926447 weaklyHypermeth 2.9979e-01 1.000000 insignificant 0.0562614 3.4461e-01 insignificant 1.0000e+00 insignificant 0.784578 0.8572469 -0.0453921 9 0.749706 0.749091 0.00061434 9.8288e-01 2.0708e-02 weaklyHypometh 1.0000e+00 0.94125082 insignificant 9.6468e-01 0.14446952 insignificant 1.0000e+00 1.000000 insignificant -4.7425e-02 1.2931e-01 insignificant 1.000000 insignificant 0.7059471 0.8572469 -0.1264967 10 0.5538507 0.749091 -0.19524077 1.0000e+00 2.0086e-05 weaklyHypometh 1.0000e+00 5.4288e-04 weaklyHypometh 1.0000e+00 1.3352e-02 weaklyHypometh 1.0000e+00 2.0862e-01 insignificant -0.1036861 1.0304e-01 insignificant 1.0000e+00 insignificant chr10 99591050 99592050 37136 SFRP5 ENSG00000120057 0.8227356 746 30 0.8079421 607 34 0.7759980 722 33 0.880081 690 29 0.754944 481 26 0.815929 783 33 0.7512177 487 26 0.819846 655 30 0.817076 435 24 0.842497 626 30 0.865883 1029 31 0.776353 344 24 0.823919 917 30 0.920599 159 6 0.840492 599 30 0.618431 227 18 0.761112 259 17 0.813959 730 29 0.881731 823 30 0.874337 652 34 0.80209 296 24 0.8164757 340 21 0.831682 512 31 0.841879 290 21 0.806898 293 23 0.8353775 817 32 0.8642546 540 24 0.779595 181 13 0.832736 601 29 0.8541368 844 33 0.8560161 663 33 0.848428 809 35 0.8306340 661 34 0.785765 744 29 0.782045 657 28 0.6623523 188 15 0.831864 327 26 0.8036380 605 29 0.849273 544 32 0.8627226 718 31 0.870686 578 28 0.832232 424 28 0.867947 658 31 0.860341 0.8521673 0.743785 0.8957928 0.805268 0.852515 0.771866 0.854733 0.8298119 0.873484 0.873610 0.820558 0.8588431 0.870223 0.869500 0.643437 0.848257 0.880937 0.8987924 0.8933433 0.804756 0.838172 0.851931 0.8858131 0.888291 0.8680840 0.8734838 0.754522 0.860710 0.8879603 0.8983130 0.868681 0.8568646 0.762050 0.8023800 0.6754328 0.8381792 0.8154666 0.870313 0.8794525 0.8676236 0.8662848 0.8855144 13 0.850221 0.863056 -0.01188195 29 0.829722 0.843253 -0.01353098 9.8265e-01 9.5673e-02 insignificant 1.000000 1.0000000 insignificant 0.972199 0.02586480 weaklyHypometh 1 1.00000 insignificant -0.01754313 0.2887593 insignificant 1 insignificant 0.850221 0.7932118 0.0601910 31 0.829722 0.7800580 0.0496639 9.7919e-07 9.9993e-01 weaklyHypermeth 1.8475e-05 1.00000000 weaklyHypermeth 1.0831e-02 9.9961e-01 weaklyHypermeth 1.5255e-01 1.000000 insignificant 0.0305377 3.2773e-01 insignificant 1.0000e+00 insignificant 0.850221 0.8634497 -0.0243501 28 0.829722 0.861858 -0.03213613 9.8418e-01 2.0322e-03 weaklyHypometh 1.0000e+00 1.5632e-01 insignificant 9.8981e-01 7.8411e-04 weaklyHypometh 1.0000e+00 0.1568211 insignificant -0.04331825 1.3268e-02 weaklyHypometh 0.2948373 insignificant 0.863056 0.7932118 7.4072e-02 29 0.843253 0.7800580 0.06319488 2.0146e-08 0.99999867 weaklyHypermeth 5.5961e-07 1.000000 weaklyHypermeth 7.9661e-05 0.99999828 weaklyHypermeth 2.3744e-03 1.000000 weaklyHypermeth 0.0480808 1.2223e-01 insignificant 1.0000e+00 insignificant 0.863056 0.8634497 -0.0133726 26 0.843253 0.861858 -0.01860515 8.6577e-01 6.8214e-02 insignificant 1.0000e+00 1.00000000 insignificant 9.1786e-01 0.24145402 insignificant 1.0000e+00 1.000000 insignificant -2.5775e-02 2.6281e-02 weaklyHypometh 0.597304 insignificant 0.7932118 0.8634497 -0.0809216 28 0.7800580 0.861858 -0.08180002 1.0000e+00 9.5794e-09 weaklyHypometh 1.0000e+00 3.9914e-07 weaklyHypometh 1.0000e+00 2.6871e-04 weaklyHypometh 1.0000e+00 1.1683e-02 weaklyHypometh -0.0738559 3.3383e-02 weaklyHypometh 5.5638e-01 insignificant chr10 102107650 102108650 37181 SCD ENSG00000099194 0.8428894 237 11 0.9311431 247 6 0.8604351 95 6 0.874096 132 10 0.886905 59 6 0.755616 470 11 0.9458333 42 6 0.913692 200 6 0.879340 107 6 0.963704 138 6 0.975639 236 6 0.777778 24 2 0.965067 420 6 NA 0 0 0.967735 76 6 0.600000 20 2 0.820708 130 9 0.824383 151 8 0.951042 304 6 0.874920 375 11 0.89404 163 6 0.9583333 24 1 0.819127 152 8 0.980811 105 6 0.966667 22 4 0.8102587 321 11 0.9519750 250 6 0.930556 30 3 0.985684 294 6 0.9026166 369 8 0.9301233 370 8 0.833811 354 11 0.8983038 205 6 0.860232 270 6 0.954762 84 6 0.9166667 9 0 0.932506 161 6 0.7838541 461 11 0.794340 134 7 0.7654303 210 11 0.882532 135 10 0.803591 98 8 0.852769 103 7 0.925864 0.9230568 0.855582 0.9511600 0.871184 0.950281 0.965812 0.907003 0.8724767 0.966572 0.975621 0.740741 0.9630317 NA 0.972343 0.690598 0.926629 0.981007 0.9485205 0.9317400 0.886964 0.957265 0.909548 0.9821188 0.957265 0.9590772 0.9486917 0.920228 0.986982 0.9669282 0.9536204 0.944657 0.8881381 0.865241 0.9470696 0.8931624 0.9181735 0.9019267 0.906242 0.9655302 0.9388414 0.8998779 0.8444444 1 0.900752 0.929503 -0.01580396 8 0.794193 0.845681 -0.05148764 9.9815e-01 2.9421e-02 weaklyHypometh 1.000000 0.8195196 insignificant 0.998612 0.10891076 insignificant 1 1.00000 insignificant -0.03940798 0.1698127 insignificant 1 insignificant 0.901478 0.8789916 0.0461367 6 0.830029 0.7805505 0.0494784 2.3933e-05 9.7721e-01 weaklyHypermeth 3.6262e-04 1.00000000 weaklyHypermeth 1.4938e-01 9.7218e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0167948 6.1921e-01 insignificant 1.0000e+00 insignificant 0.899220 0.8397059 -0.0155689 8 0.744090 0.778566 -0.03447526 6.2154e-01 1.3286e-02 weaklyHypometh 1.0000e+00 4.8116e-01 insignificant 9.0971e-01 7.3583e-02 insignificant 1.0000e+00 1.0000000 insignificant 0.05452675 9.1954e-02 insignificant 1.0000000 insignificant 0.929825 0.8789916 5.9028e-02 6 0.861955 0.7805505 0.08140434 2.4716e-07 0.99907724 weaklyHypermeth 5.1491e-06 1.000000 weaklyHypermeth 2.5956e-02 0.99364549 weaklyHypermeth 2.8213e-01 1.000000 insignificant 0.0226132 4.8114e-01 insignificant 1.0000e+00 insignificant 0.929503 0.8421829 0.0130408 8 0.845681 0.843446 0.00223468 1.1062e-01 1.0086e-01 insignificant 1.0000e+00 1.00000000 insignificant 2.0094e-01 0.30589665 insignificant 1.0000e+00 1.000000 insignificant 9.3935e-02 6.9031e-03 weaklyHypermeth 0.287732 insignificant 0.8789916 0.8431953 -0.0516521 6 0.7805505 0.874669 -0.09411802 9.9371e-01 5.5969e-05 weaklyHypometh 1.0000e+00 1.3329e-03 weaklyHypometh 9.8839e-01 4.9463e-02 weaklyHypometh 1.0000e+00 5.6319e-01 insignificant 0.0713216 5.7766e-02 insignificant 7.5021e-01 insignificant chr10 102107950 102108950 37182 SCD ENSG00000099194 0.8428894 237 11 0.9311431 247 6 0.8604351 95 6 0.874096 132 10 0.886905 59 6 0.755616 470 11 0.9458333 42 6 0.913692 200 6 0.879340 107 6 0.963704 138 6 0.975639 236 6 0.777778 24 2 0.965067 420 6 NA 0 0 0.967735 76 6 0.600000 20 2 0.820708 130 9 0.824383 151 8 0.951042 304 6 0.874920 375 11 0.89404 163 6 0.9583333 24 1 0.819127 152 8 0.980811 105 6 0.966667 22 4 0.8102587 321 11 0.9519750 250 6 0.930556 30 3 0.985684 294 6 0.9026166 369 8 0.9301233 370 8 0.833811 354 11 0.8983038 205 6 0.860232 270 6 0.954762 84 6 0.9166667 9 0 0.932506 161 6 0.7838541 461 11 0.794340 134 7 0.7654303 210 11 0.882532 135 10 0.803591 98 8 0.852769 103 7 0.925864 0.9230568 0.855582 0.9511600 0.871184 0.950281 0.965812 0.907003 0.8724767 0.966572 0.975621 0.740741 0.9630317 NA 0.972343 0.690598 0.926629 0.981007 0.9485205 0.9317400 0.886964 0.957265 0.909548 0.9821188 0.957265 0.9590772 0.9486917 0.920228 0.986982 0.9669282 0.9536204 0.944657 0.8881381 0.865241 0.9470696 0.8931624 0.9181735 0.9019267 0.906242 0.9655302 0.9388414 0.8998779 0.8444444 1 0.900752 0.929503 -0.01580396 8 0.794193 0.845681 -0.05148764 9.9815e-01 2.9421e-02 weaklyHypometh 1.000000 0.8195196 insignificant 0.998612 0.10891076 insignificant 1 1.00000 insignificant -0.03940798 0.1698127 insignificant 1 insignificant 0.901478 0.8789916 0.0461367 6 0.830029 0.7805505 0.0494784 2.3933e-05 9.7721e-01 weaklyHypermeth 3.6262e-04 1.00000000 weaklyHypermeth 1.4938e-01 9.7218e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0167948 6.1921e-01 insignificant 1.0000e+00 insignificant 0.899220 0.8397059 -0.0155689 8 0.744090 0.778566 -0.03447526 6.2154e-01 1.3286e-02 weaklyHypometh 1.0000e+00 4.8116e-01 insignificant 9.0971e-01 7.3583e-02 insignificant 1.0000e+00 1.0000000 insignificant 0.05452675 9.1954e-02 insignificant 1.0000000 insignificant 0.929825 0.8789916 5.9028e-02 6 0.861955 0.7805505 0.08140434 2.4716e-07 0.99907724 weaklyHypermeth 5.1491e-06 1.000000 weaklyHypermeth 2.5956e-02 0.99364549 weaklyHypermeth 2.8213e-01 1.000000 insignificant 0.0226132 4.8114e-01 insignificant 1.0000e+00 insignificant 0.929503 0.8421829 0.0130408 8 0.845681 0.843446 0.00223468 1.1062e-01 1.0086e-01 insignificant 1.0000e+00 1.00000000 insignificant 2.0094e-01 0.30589665 insignificant 1.0000e+00 1.000000 insignificant 9.3935e-02 6.9031e-03 weaklyHypermeth 0.287732 insignificant 0.8789916 0.8431953 -0.0516521 6 0.7805505 0.874669 -0.09411802 9.9371e-01 5.5969e-05 weaklyHypometh 1.0000e+00 1.3329e-03 weaklyHypometh 9.8839e-01 4.9463e-02 weaklyHypometh 1.0000e+00 5.6319e-01 insignificant 0.0713216 5.7766e-02 insignificant 7.5021e-01 insignificant chr10 102761150 102762150 37187 LZTS2 ENSG00000107816 0.7983128 97 7 0.7102226 299 7 0.7042165 236 7 0.859353 100 7 0.693970 105 7 0.760113 141 7 0.7146492 147 6 0.770914 219 7 0.737143 210 7 0.875721 204 7 0.763304 212 7 0.735763 82 5 0.760010 272 7 0.667508 64 3 0.778188 183 7 0.637769 91 7 0.492857 38 4 0.708333 85 3 0.721173 265 7 0.725479 110 7 0.84619 74 7 0.6885155 74 3 0.743487 156 7 0.746566 108 7 0.672980 28 3 0.6883278 358 9 0.7115767 163 7 0.709768 62 6 0.811881 284 7 0.6670544 467 7 0.7980590 347 7 0.863563 150 7 0.5923709 223 7 0.589217 180 7 0.723810 150 5 0.6681818 77 5 0.653035 112 7 0.6907297 285 8 0.683312 101 6 0.8177827 104 7 0.665143 76 4 0.693563 70 5 0.627132 86 6 0.760434 0.6955919 0.652352 0.7844280 0.659947 0.723258 0.700001 0.771009 0.7171180 0.880795 0.768543 0.707351 0.7101178 0.707983 0.718550 0.594625 0.528871 0.693965 0.7900856 0.6385130 0.856714 0.602288 0.818317 0.6817344 0.741567 0.7290040 0.6922640 0.662434 0.795171 0.6983277 0.7580162 0.825601 0.5218135 0.507477 0.4915420 0.5545308 0.5842904 0.6109845 0.635933 0.7418013 0.5196051 0.6032691 0.5771419 3 0.737726 0.753744 -0.02028176 7 0.740551 0.737789 0.00276162 7.6477e-01 4.4114e-01 insignificant 1.000000 1.0000000 insignificant 0.926875 0.15076603 insignificant 1 1.00000 insignificant -0.01491411 0.5805619 insignificant 1 insignificant 0.737892 0.6046738 0.1449857 7 0.764137 0.7439053 0.0202320 5.5904e-08 2.9981e-01 weaklyHypermeth 1.2705e-06 1.00000000 weaklyHypermeth 1.3095e-02 6.7997e-01 weaklyHypermeth 1.7696e-01 1.000000 insignificant 0.0778594 1.7042e-02 weaklyHypermeth 3.2774e-01 insignificant 0.737892 0.6109840 0.1086387 7 0.764137 0.777709 -0.01357183 5.5035e-02 7.6226e-01 insignificant 9.2789e-01 1.0000e+00 insignificant 1.6482e-01 6.5639e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.03336345 3.9587e-01 insignificant 1.0000000 insignificant 0.753744 0.6042885 1.7015e-01 7 0.737789 0.7182958 0.01949353 2.2050e-06 0.33002607 weaklyHypermeth 3.7415e-05 1.000000 weaklyHypermeth 9.6494e-04 0.60617374 weaklyHypermeth 2.0977e-02 1.000000 weaklyHypermeth 0.0927736 8.0147e-03 weaklyHypermeth 1.7053e-01 insignificant 0.753744 0.6100917 0.1224307 7 0.737789 0.755480 -0.01769064 6.2360e-03 3.9692e-01 weaklyHypermeth 1.4502e-01 1.00000000 insignificant 3.8677e-02 0.60542433 weaklyHypermeth 7.8626e-01 1.000000 insignificant 4.8278e-02 2.4052e-01 insignificant 1.000000 insignificant 0.6046738 0.6109840 -0.0623928 7 0.7439053 0.777709 -0.03380379 8.3263e-01 6.8750e-02 insignificant 1.0000e+00 5.6818e-01 insignificant 9.6337e-01 3.0684e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0444960 2.8892e-01 insignificant 1.0000e+00 insignificant chr10 103040750 103041750 37190 ENSG00000210888 0.0222487 1424 29 0.0139488 1015 29 0.0503471 1316 29 0.091424 1105 29 0.065217 882 29 0.046354 1554 29 0.0210651 1406 29 0.054127 1149 29 0.044016 1731 29 0.058413 1747 29 0.047920 843 29 0.049705 1363 29 0.029942 1427 29 0.014821 607 20 0.020064 1618 29 0.022112 1228 29 0.049706 1036 29 0.023591 1454 29 0.030972 686 29 0.044839 1598 29 0.09972 266 27 0.0130128 765 29 0.064782 1277 29 0.052440 623 29 0.050031 580 29 0.0831991 1333 29 0.0325703 860 29 0.029860 677 30 0.049782 837 29 0.0750546 1408 29 0.0442349 1290 29 0.055079 1501 29 0.0480037 1002 29 0.015850 751 29 0.105263 444 17 0.0241564 403 27 0.048685 524 27 0.0483601 1134 29 0.032513 1501 29 0.0149812 1406 29 0.023104 1264 29 0.053335 1262 29 0.020660 1257 29 0.026350 0.0186627 0.056522 0.0213003 0.048346 0.041689 0.025229 0.033461 0.0358166 0.035335 0.058902 0.064819 0.0211694 0.016785 0.023991 0.029204 0.047085 0.024994 0.0415762 0.0162825 0.060527 0.014626 0.037111 0.0245984 0.016070 0.0250809 0.0184932 0.020915 0.024743 0.0139911 0.0158916 0.031975 0.0211161 0.019594 0.0615092 0.0273359 0.0521334 0.0169471 0.019699 0.0148952 0.0138580 0.0225316 0.0240901 29 0.031483 0.023739 0.00777397 29 0.065430 0.101624 -0.03619446 4.3634e-01 6.4928e-01 insignificant 1.000000 1.0000000 insignificant 0.159504 0.89340736 insignificant 1 1.00000 insignificant -0.01410561 0.1019661 insignificant 1 insignificant 0.031496 0.0190230 0.0097786 29 0.072908 0.0717299 0.0011776 3.3979e-03 8.8989e-01 weaklyHypermeth 3.3643e-02 1.00000000 weaklyHypermeth 2.6944e-03 9.7681e-01 weaklyHypermeth 4.7271e-02 1.000000 weaklyHypermeth -0.0083448 5.5829e-01 insignificant 1.0000e+00 insignificant 0.031496 0.0213752 0.0151624 29 0.072908 0.034449 0.03845868 2.4246e-01 9.9044e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.9350e-01 9.9581e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.01112282 2.0486e-01 insignificant 1.0000000 insignificant 0.023676 0.0190230 2.7179e-03 29 0.106096 0.0717299 0.03436576 5.6965e-02 0.67983535 insignificant 4.3819e-01 1.000000 insignificant 7.5668e-02 0.90830192 insignificant 6.1519e-01 1.000000 insignificant 0.0057608 7.0185e-01 insignificant 1.0000e+00 insignificant 0.023676 0.0213752 0.0052644 29 0.106096 0.034449 0.07164680 2.9347e-01 9.7980e-01 insignificant 1.0000e+00 1.00000000 insignificant 4.5604e-01 0.87668852 insignificant 1.0000e+00 1.000000 insignificant 2.5228e-02 2.2704e-02 weaklyHypermeth 0.551786 insignificant 0.0190230 0.0213752 0.0026009 29 0.0717299 0.034449 0.03728103 9.4630e-01 6.6444e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8866e-01 5.8957e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0194677 2.1661e-01 insignificant 1.0000e+00 insignificant chr10 103548150 103549150 37194 NPM3 ENSG00000107833 0.8049654 218 5 0.8163842 156 5 0.6697528 76 5 0.838571 100 5 0.903704 52 5 0.680994 293 5 0.7532967 70 5 0.781795 118 5 0.740458 101 5 0.844595 91 4 0.832806 183 5 0.798990 62 4 0.781818 111 5 0.954545 13 1 0.817460 96 5 0.664780 56 5 0.518681 56 4 0.807910 126 5 0.767003 101 5 0.681215 243 5 0.70417 79 4 0.7259972 68 4 0.811456 146 5 0.746573 75 5 0.871429 37 4 0.6881707 182 5 0.8038974 72 5 0.611763 87 5 0.814895 117 4 0.7302624 195 5 0.7869710 180 5 0.735414 347 5 0.7199763 142 5 0.608974 113 5 0.578781 237 5 0.7348252 46 4 0.704142 134 5 0.7202411 197 5 0.808199 174 5 0.8527360 168 5 0.844263 97 5 0.797010 170 4 0.858741 134 5 0.791889 0.7898945 0.649302 0.8010850 0.858790 0.716777 0.761128 0.761102 0.7111221 0.797735 0.814120 0.783020 0.7455409 0.771914 0.785714 0.686793 0.649356 0.809987 0.7327850 0.6531599 0.715822 0.844405 0.772619 0.7217963 0.830380 0.6650085 0.7922721 0.694106 0.750921 0.7264307 0.7230202 0.724119 0.6911000 0.513443 0.5160450 0.6733351 0.7019508 0.6781979 0.774235 0.8335110 0.7679264 0.7630870 0.8392494 4 0.772179 0.764038 0.01560198 5 0.752943 0.712353 0.04059015 2.9258e-01 5.5556e-01 insignificant 1.000000 1.0000000 insignificant 0.393801 0.53441391 insignificant 1 1.00000 insignificant 0.02040271 0.4932263 lowCoverage 1 lowCoverage 0.772453 0.6950518 0.1062018 5 0.770198 0.6797902 0.0904078 6.6577e-05 8.6716e-01 weaklyHypermeth 8.7601e-04 1.00000000 weaklyHypermeth 1.1495e-03 9.6950e-01 weaklyHypermeth 2.2106e-02 1.000000 weaklyHypermeth 0.0951630 1.7590e-02 lowCoverage 3.3189e-01 lowCoverage 0.772179 0.8196501 -0.0436290 5 0.752943 0.849398 -0.09645507 9.9654e-01 2.0744e-02 weaklyHypometh 1.0000e+00 6.2820e-01 insignificant 9.9769e-01 2.1953e-02 weaklyHypometh 1.0000e+00 0.7570158 insignificant -0.05920345 2.6048e-02 lowCoverage 0.4914653 lowCoverage 0.765041 0.6950518 9.7076e-02 5 0.754823 0.6797902 0.07503295 1.3902e-03 0.93185181 weaklyHypermeth 1.5110e-02 1.000000 weaklyHypermeth 2.3506e-03 0.99637777 weaklyHypermeth 4.3530e-02 1.000000 weaklyHypermeth 0.0747603 4.9735e-02 lowCoverage 6.1922e-01 lowCoverage 0.764038 0.8196501 -0.0672932 5 0.712353 0.849398 -0.13704523 9.9982e-01 4.7682e-03 weaklyHypometh 1.0000e+00 0.31787813 insignificant 9.9953e-01 0.02624226 weaklyHypometh 1.0000e+00 1.000000 insignificant -7.9606e-02 4.1842e-03 lowCoverage 0.260133 lowCoverage 0.6950518 0.8189189 -0.1693365 5 0.6797902 0.819277 -0.13948722 9.9867e-01 1.0431e-03 weaklyHypometh 1.0000e+00 1.6047e-02 weaklyHypometh 9.9998e-01 9.0704e-05 weaklyHypometh 1.0000e+00 4.5352e-03 weaklyHypometh -0.1543664 1.3255e-03 lowCoverage 7.5632e-02 lowCoverage chr10 103973950 103974950 37204 NOLC1 ENSG00000166197 0.7568229 120 5 0.7546371 94 5 0.6952381 70 5 0.803117 88 5 0.715079 42 5 0.764551 124 5 0.6125253 41 5 0.695803 77 5 0.861667 32 5 0.760000 35 5 0.717460 191 5 0.944444 13 2 0.774335 89 5 0.666667 36 5 0.619048 64 5 0.388889 12 0 1.000000 9 0 0.711214 117 5 0.646193 90 5 0.821627 115 5 0.60714 26 2 0.7866667 17 2 0.602222 52 5 0.714286 21 2 0.928571 15 2 0.6776199 117 5 0.6111842 45 2 0.541667 15 1 0.800000 66 5 0.6943470 111 5 0.7260445 144 5 0.745463 189 5 0.7423977 71 5 0.677270 89 5 0.625595 88 5 NA 0 0 0.517692 40 3 0.6532911 127 5 0.807215 66 5 0.8061005 98 5 0.787619 72 5 0.715000 46 5 0.773913 112 5 0.855397 0.8073889 0.783333 0.8745607 0.744981 0.818800 0.781937 0.754559 0.8924020 0.810294 0.877288 0.894685 0.8099769 0.693277 0.740573 0.612745 1.000000 0.778688 0.7384734 0.8569853 0.815126 0.794118 0.669526 0.9044118 0.866748 0.8154776 0.6793216 0.827412 0.890523 0.7891440 0.8434525 0.846511 0.7974286 0.710469 0.7601716 NA 0.5974736 0.7991801 0.800059 0.8935319 0.8869048 0.8125000 0.9189197 1 0.742975 0.737164 0.01296863 5 0.751488 0.614887 0.13660042 4.6053e-01 6.9276e-01 insignificant 1.000000 1.0000000 insignificant 0.182630 0.73988463 insignificant 1 1.00000 insignificant 0.03253141 0.4449936 lowCoverage 1 lowCoverage 0.743466 0.6867470 0.0649117 5 0.770424 0.6051439 0.1652798 2.3539e-02 9.9353e-01 weaklyHypermeth 1.8535e-01 1.00000000 insignificant 1.4235e-02 9.9970e-01 weaklyHypermeth 1.8711e-01 1.000000 insignificant 0.0922165 7.7714e-02 lowCoverage 9.3631e-01 lowCoverage 0.743448 0.7817259 -0.0422018 5 0.773341 0.836371 -0.06302945 9.4946e-01 7.6456e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8951e-01 1.9951e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.04250364 2.1450e-01 lowCoverage 1.0000000 lowCoverage 0.739237 0.6867470 5.1137e-02 5 0.641748 0.6051439 0.03660430 1.1275e-02 0.80623207 weaklyHypermeth 9.8046e-02 1.000000 weaklyHypermeth 6.0765e-02 0.92883919 insignificant 5.1496e-01 1.000000 insignificant 0.0596851 2.4233e-01 lowCoverage 1.0000e+00 lowCoverage 0.738861 0.7817259 -0.0571335 5 0.619141 0.836371 -0.21722998 9.6025e-01 6.3526e-02 insignificant 1.0000e+00 1.00000000 insignificant 9.9199e-01 0.04538040 weaklyHypometh 1.0000e+00 1.000000 insignificant -7.5035e-02 4.9147e-02 lowCoverage 0.910131 lowCoverage 0.6884058 0.7817259 -0.1074977 5 0.6915930 0.836371 -0.14477775 9.9963e-01 7.1295e-03 weaklyHypometh 1.0000e+00 8.1949e-02 weaklyHypometh 1.0000e+00 6.8009e-03 weaklyHypometh 1.0000e+00 1.3079e-01 insignificant -0.1347202 1.7621e-02 lowCoverage 3.4052e-01 lowCoverage chr10 104206150 104207150 37206 C10orf95 ENSG00000120055 0.6275067 94 5 0.5435396 133 7 0.6020202 39 5 0.697379 102 3 0.414966 59 5 0.601264 104 7 0.7857143 39 5 0.612195 90 7 0.790000 37 4 0.601984 34 3 0.579557 145 7 0.500000 22 0 0.628757 62 5 0.589103 58 5 0.714057 54 5 0.513889 20 0 NA 0 0 0.584296 165 6 0.632453 108 7 0.614286 66 5 0.80000 27 5 0.8888889 8 0 0.480220 94 4 0.671429 37 5 0.692857 69 3 0.6324405 69 5 0.6166056 39 2 0.610317 35 5 0.596327 123 7 0.5836963 96 7 0.5975936 85 5 0.592971 65 6 0.5645990 92 5 0.546939 77 4 0.583253 117 7 0.4400000 21 3 0.575758 62 5 0.6017316 98 5 0.530423 102 6 0.5014286 91 4 0.586770 107 4 0.608435 92 6 0.546330 88 5 0.672377 0.5628242 0.623132 0.6883973 0.556358 0.609464 0.736656 0.687418 0.7648352 0.639866 0.597817 0.554945 0.6887398 0.623028 0.592366 0.423993 NA 0.596297 0.6891545 0.6581960 0.780220 0.824523 0.524091 0.6722920 0.730508 0.6108844 0.6696722 0.641148 0.630958 0.6231581 0.6222601 0.585973 0.5998650 0.517530 0.5912519 0.4857143 0.5977356 0.6560523 0.546195 0.5377289 0.6134608 0.6109628 0.6032446 0 0.619314 0.634538 -0.01131669 5 0.647544 0.654252 -0.00670781 5.8185e-01 4.8467e-01 insignificant 1.000000 1.0000000 insignificant 0.763477 0.40643686 insignificant 1 1.00000 insignificant -0.03468402 0.3640240 lowCoverage 1 lowCoverage 0.619048 0.5888651 0.0343753 5 0.597194 0.5738578 0.0233359 1.7731e-01 8.7997e-01 insignificant 1.0000e+00 1.00000000 insignificant 2.4396e-01 9.6695e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0602147 7.7455e-02 lowCoverage 9.3631e-01 lowCoverage 0.619048 0.6041667 0.0170753 4 0.597194 0.547928 0.04926522 3.2444e-02 7.5663e-01 lowCoverage 6.2738e-01 1.0000e+00 lowCoverage 2.6600e-01 7.9463e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 0.05758392 6.1331e-02 lowCoverage 0.8287915 lowCoverage 0.634048 0.5888651 4.6616e-02 5 0.604860 0.5738578 0.03100192 1.1864e-01 0.66722519 insignificant 8.0705e-01 1.000000 insignificant 1.3642e-01 0.84184394 insignificant 1.0000e+00 1.000000 insignificant 0.0948987 2.7163e-02 lowCoverage 4.3812e-01 lowCoverage 0.634048 0.6041667 0.0391172 4 0.604860 0.547928 0.05693128 6.4372e-02 8.0262e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 1.5043e-01 0.83374489 lowCoverage 1.0000e+00 1.000000 lowCoverage 9.2268e-02 2.3175e-02 lowCoverage 0.551786 lowCoverage 0.5888651 0.6041667 -0.0084371 4 0.5738578 0.547928 0.02592936 5.4009e-01 3.6794e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.0501e-01 3.0969e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0026308 9.3311e-01 lowCoverage 1.0000e+00 lowCoverage chr10 104212250 104213250 37207 TMEM180 ENSG00000138111 0.5705045 251 7 0.4708075 176 7 0.6510204 71 7 0.503111 220 7 0.412690 89 3 0.571899 260 7 0.6783460 133 3 0.516883 122 7 0.705442 63 7 0.780612 51 7 0.700122 210 7 0.495238 27 3 0.658730 90 7 0.486731 97 7 0.627699 97 7 0.492857 56 7 1.000000 1 0 0.516213 584 6 0.469898 188 7 0.527083 204 7 0.63148 62 7 0.5476190 18 0 0.555157 145 7 0.513533 95 3 0.448020 208 3 0.5832851 191 7 0.4809001 62 6 0.952381 13 0 0.649657 173 7 0.4365564 244 7 0.4871711 223 7 0.633202 181 7 0.4903210 148 7 0.308699 91 7 0.706944 65 4 0.6428571 50 3 0.576969 153 6 0.5961259 239 7 0.509299 284 7 0.4137887 204 7 0.516552 161 7 0.524721 202 3 0.576083 215 7 0.433086 0.3569703 0.578458 0.3646280 0.430322 0.467460 0.499649 0.412025 0.6227513 0.767007 0.554477 0.537566 0.5917108 0.428791 0.527441 0.554233 NA 0.399824 0.2849206 0.5164021 0.632275 0.388889 0.424802 0.3464478 0.324612 0.4473631 0.3597448 0.925926 0.386474 0.3042444 0.4037803 0.520045 0.3231429 0.236404 0.5400702 0.5833333 0.3947700 0.5098467 0.374253 0.3085342 0.3392402 0.3955979 0.4601497 3 0.373744 0.356921 0.03771301 7 0.533312 0.558359 -0.02504677 5.8333e-01 6.4650e-01 insignificant 1.000000 1.0000000 insignificant 0.379908 0.64593415 insignificant 1 1.00000 insignificant 0.01521410 0.7657916 insignificant 1 insignificant 0.373534 0.3914209 0.0326287 7 0.474976 0.5196214 -0.0446450 4.9874e-01 8.7839e-01 insignificant 1.0000e+00 1.00000000 insignificant 2.8296e-01 7.9024e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0381416 5.7244e-01 insignificant 1.0000e+00 insignificant 0.373785 0.2823640 0.0702082 7 0.542830 0.502801 0.04002961 1.1407e-01 8.0036e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.3383e-03 7.7565e-01 weaklyHypermeth 1.4514e-01 1.0000000 insignificant 0.08370572 5.5221e-02 insignificant 0.7777570 insignificant 0.356522 0.3914209 -1.7276e-03 7 0.503154 0.5196214 -0.01646734 3.5558e-01 0.65574678 insignificant 1.0000e+00 1.000000 insignificant 4.4627e-01 0.93829164 insignificant 1.0000e+00 1.000000 insignificant 0.0229275 7.4907e-01 insignificant 1.0000e+00 insignificant 0.356787 0.2823640 0.0315873 7 0.539319 0.502801 0.03651832 1.7243e-01 8.0883e-01 insignificant 1.0000e+00 1.00000000 insignificant 7.9058e-02 0.78499256 insignificant 1.0000e+00 1.000000 insignificant 6.8492e-02 1.7340e-01 insignificant 1.000000 insignificant 0.3911290 0.2823640 0.0330548 7 0.5224245 0.502801 0.01962385 5.1044e-01 8.1106e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.1750e-01 8.4724e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0455641 4.9232e-01 insignificant 1.0000e+00 insignificant chr10 104217050 104218050 37208 TMEM180 ENSG00000138111 0.7182785 163 8 0.7158008 197 8 0.5493374 159 9 0.760089 94 4 0.678455 103 8 0.696302 294 7 0.7153378 133 9 0.689347 137 8 0.725180 137 8 0.883818 155 8 0.805811 282 9 0.634858 100 8 0.802208 186 9 0.766667 34 4 0.859712 139 7 0.665614 57 6 0.794372 51 6 0.642071 143 5 0.636725 248 8 0.677243 245 7 0.77530 108 8 0.8536476 68 5 0.577086 159 8 0.754185 73 7 0.850000 25 4 0.7336597 216 8 0.6055441 107 8 0.716226 65 6 0.767493 143 8 0.8574702 267 8 0.6790123 183 8 0.774603 272 9 0.5751862 181 8 0.577583 145 7 0.621333 162 7 0.5257143 21 2 0.767806 102 8 0.6571565 183 8 0.735238 131 5 0.7883851 171 8 0.822245 110 5 0.690475 121 5 0.690490 132 5 0.721405 0.7404044 0.672952 0.7451541 0.669693 0.803008 0.712790 0.809254 0.7008800 0.835787 0.783493 0.658250 0.8065410 0.799168 0.803394 0.734876 0.725649 0.721696 0.6836712 0.7595548 0.759388 0.827787 0.668769 0.6705324 0.857366 0.7538960 0.7298633 0.691507 0.741823 0.8330261 0.6470474 0.785931 0.7181628 0.630442 0.6940432 0.6314146 0.7403230 0.7248981 0.824060 0.7859723 0.7862532 0.7621108 0.8273736 4 0.763821 0.771649 -0.01148595 8 0.714882 0.741682 -0.02679913 8.8593e-01 2.2901e-01 insignificant 1.000000 1.0000000 insignificant 0.700569 0.05832197 insignificant 1 1.00000 insignificant -0.02449118 0.4521800 insignificant 1 insignificant 0.763821 0.7052897 0.0645775 8 0.714882 0.6411131 0.0737693 4.1280e-03 9.9930e-01 weaklyHypermeth 3.8580e-02 1.00000000 weaklyHypermeth 1.7314e-02 9.9579e-01 weaklyHypermeth 2.1114e-01 1.000000 insignificant 0.1000647 3.3765e-02 weaklyHypermeth 5.1160e-01 insignificant 0.763821 0.7969925 -0.0376029 6 0.714882 0.648260 0.06662238 3.8819e-01 1.0262e-03 weaklyHypometh 1.0000e+00 1.0262e-01 insignificant 6.1651e-01 1.5693e-03 weaklyHypometh 1.0000e+00 0.1853012 insignificant -0.02450533 4.6593e-01 insignificant 1.0000000 insignificant 0.771649 0.7052897 7.3642e-02 8 0.741682 0.6411131 0.10056843 2.2691e-03 0.99957591 weaklyHypermeth 2.3885e-02 1.000000 weaklyHypermeth 3.9744e-03 0.99811278 weaklyHypermeth 6.7362e-02 1.000000 weaklyHypermeth 0.1245559 1.5571e-02 weaklyHypermeth 2.9379e-01 insignificant 0.771649 0.7969925 -0.0371635 6 0.741682 0.648260 0.09342150 6.2025e-01 6.2637e-02 insignificant 1.0000e+00 1.00000000 insignificant 8.4156e-01 0.05825759 insignificant 1.0000e+00 1.000000 insignificant -1.4153e-05 9.9970e-01 insignificant 1.000000 insignificant 0.7052897 0.7969925 -0.0996982 6 0.6411131 0.648260 -0.00714693 9.6738e-01 3.8559e-04 weaklyHypometh 1.0000e+00 7.2077e-03 weaklyHypometh 9.9863e-01 8.3175e-04 weaklyHypometh 1.0000e+00 2.7725e-02 weaklyHypometh -0.1245701 1.9109e-02 weaklyHypometh 3.5387e-01 insignificant chr10 104348350 104349350 37211 ENSG00000207029 0.9115652 218 6 0.8648990 90 6 0.9097272 149 6 0.939093 289 6 0.885582 75 6 0.949160 196 6 0.9068853 118 6 0.921065 100 6 0.931936 143 6 0.958946 101 6 0.962946 147 6 0.872950 79 6 0.914224 169 6 1.000000 43 6 0.950232 136 6 0.976190 60 4 0.921212 62 6 0.961958 295 6 0.984848 63 6 0.952796 148 6 0.90909 55 6 0.8724299 142 6 0.906365 127 6 0.925000 79 6 0.902619 96 6 0.9093436 153 6 0.9436940 76 5 0.871561 48 6 0.866793 58 6 0.9578530 122 6 0.9607008 109 6 0.961852 271 6 0.8970186 132 6 0.800505 100 6 0.982143 51 4 0.7876263 49 4 0.913805 69 6 0.9026472 99 6 0.945787 240 6 0.8933937 233 6 0.954837 215 6 0.794461 199 6 0.919071 223 6 0.921696 0.8651167 0.895451 0.9455514 0.908761 0.956162 0.909160 0.922680 0.9504771 0.976180 0.953887 0.857424 0.9304475 1.000000 0.958863 0.969896 0.933299 0.954245 0.9808429 0.9590374 0.888541 0.888437 0.906390 0.9377395 0.912685 0.9142039 0.9314795 0.873168 0.849210 0.9653233 0.9572703 0.967855 0.8850931 0.843144 0.9367813 0.8457854 0.9090135 0.9228872 0.946278 0.9010416 0.9594602 0.8082205 0.9281933 5 0.933980 0.922904 0.00903181 6 0.931626 0.923112 0.00851389 1.9024e-01 8.6505e-01 insignificant 1.000000 1.0000000 insignificant 0.087852 0.98198540 insignificant 1 1.00000 insignificant 0.01820219 0.1724543 insignificant 1 insignificant 0.933980 0.8940000 0.0394322 6 0.931626 0.8912200 0.0404062 1.1591e-02 9.2763e-01 weaklyHypermeth 9.9064e-02 1.00000000 weaklyHypermeth 9.1201e-02 7.7950e-01 insignificant 7.6640e-01 1.000000 insignificant 0.0531866 1.4138e-01 insignificant 1.0000e+00 insignificant 0.933980 0.9144144 0.0254413 6 0.931626 0.905106 0.02652042 1.9238e-02 9.4128e-01 weaklyHypermeth 4.5805e-01 1.0000e+00 insignificant 2.3622e-02 9.8513e-01 weaklyHypermeth 6.0568e-01 1.0000000 insignificant 0.03230086 3.3378e-01 insignificant 1.0000000 insignificant 0.922904 0.8940000 2.9911e-02 6 0.923112 0.8912200 0.03189230 1.6722e-01 0.90898807 insignificant 1.0000e+00 1.000000 insignificant 4.4971e-01 0.51502724 insignificant 1.0000e+00 1.000000 insignificant 0.0349844 3.1197e-01 insignificant 1.0000e+00 insignificant 0.922904 0.9144144 0.0175072 6 0.923112 0.905106 0.01800652 2.3428e-01 9.0694e-01 insignificant 1.0000e+00 1.00000000 insignificant 3.5164e-01 0.91536942 insignificant 1.0000e+00 1.000000 insignificant 1.4099e-02 6.6377e-01 insignificant 1.000000 insignificant 0.8940000 0.9144144 -0.0127615 6 0.8912200 0.905106 -0.01388578 8.3766e-01 6.1861e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.8960e-01 8.0223e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0208857 6.2861e-01 insignificant 1.0000e+00 insignificant chr10 104468550 104469550 37217 SFXN2 ENSG00000156398 0.7304346 214 6 0.5477740 135 6 0.6174274 106 6 0.735541 138 6 0.689432 68 6 0.617079 289 6 0.7156250 67 4 0.490196 121 6 0.606024 99 6 0.566964 92 6 0.732159 231 6 0.649074 47 6 0.728219 110 6 0.636243 29 3 0.751134 84 6 0.704060 64 4 0.520328 50 4 0.569399 157 6 0.721481 168 6 0.581922 231 6 0.41503 31 2 0.7842175 54 4 0.725015 124 6 0.872024 80 5 0.722222 25 2 0.5865176 209 6 0.6614478 54 4 0.783333 24 2 0.828844 84 5 0.6911376 207 6 0.5411461 204 6 0.526662 327 6 0.5270693 135 6 0.657886 133 6 0.568778 132 6 0.6666667 21 2 0.701178 55 4 0.6434364 192 6 0.668773 212 6 0.7143837 191 6 0.757382 159 6 0.705584 217 6 0.710190 152 6 0.840102 0.7404292 0.750462 0.8742812 0.769034 0.804200 0.851712 0.777907 0.6815225 0.879159 0.838672 0.749962 0.7975557 0.799037 0.827571 0.865297 0.687464 0.777397 0.8137253 0.8285022 0.703447 0.834079 0.836399 0.9209475 0.856164 0.7992482 0.7499481 0.857094 0.858171 0.8199690 0.8004303 0.821146 0.6576259 0.744461 0.6445152 0.8082192 0.7971150 0.7242776 0.790717 0.8283304 0.8349048 0.7944767 0.8384790 2 0.727600 0.756852 -0.00861613 6 0.622529 0.650877 -0.02834806 8.9865e-01 3.8997e-01 insignificant 1.000000 1.0000000 insignificant 0.948209 0.25061572 insignificant 1 1.00000 insignificant -0.03260750 0.4648707 lowCoverage 1 lowCoverage 0.732871 0.6482036 0.1002639 6 0.703402 0.6063583 0.0970432 2.0937e-06 1.0000e+00 weaklyHypermeth 3.7387e-05 1.00000000 weaklyHypermeth 2.6474e-02 9.9533e-01 weaklyHypermeth 2.9040e-01 1.000000 insignificant 0.0180235 5.9068e-01 insignificant 1.0000e+00 insignificant 0.727600 0.7142857 -0.0091253 6 0.622529 0.697720 -0.07519094 9.4708e-01 1.3381e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6028e-01 2.5648e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.06573654 1.0480e-02 weaklyHypometh 0.2495168 insignificant 0.761733 0.6482036 1.0601e-01 6 0.705482 0.6063583 0.09912417 6.9897e-07 0.99989635 weaklyHypermeth 1.3188e-05 1.000000 weaklyHypermeth 1.5259e-02 0.99618805 weaklyHypermeth 2.0078e-01 1.000000 insignificant 0.0506310 3.0547e-01 lowCoverage 1.0000e+00 lowCoverage 0.756852 0.7142857 -0.0037265 6 0.650877 0.697720 -0.04684287 7.7725e-01 4.0012e-01 insignificant 1.0000e+00 1.00000000 insignificant 7.9112e-01 0.62099668 insignificant 1.0000e+00 1.000000 insignificant -3.3129e-02 4.4393e-01 lowCoverage 1.000000 lowCoverage 0.6482036 0.7145946 -0.1083156 6 0.6063583 0.713247 -0.10688847 9.9996e-01 3.6559e-05 weaklyHypometh 1.0000e+00 9.6208e-04 weaklyHypometh 9.9940e-01 1.1309e-02 weaklyHypometh 1.0000e+00 1.8540e-01 insignificant -0.0837600 2.6521e-02 weaklyHypometh 4.4951e-01 insignificant chr10 104528750 104529750 37223 C10orf26 ENSG00000166272 0.7298018 246 8 0.5937592 356 7 0.5463568 198 8 0.690345 228 6 0.477710 143 8 0.718667 290 7 0.5983009 151 7 0.668816 204 7 0.553250 133 6 0.695353 106 6 0.742652 337 8 0.752381 51 5 0.507344 196 7 0.634856 88 6 0.729509 150 7 0.611111 46 6 0.437594 54 5 0.373617 216 7 0.696859 156 6 0.639597 258 6 0.66348 77 5 0.7735450 53 2 0.738432 172 7 0.600287 112 6 0.590741 84 5 0.5840374 350 7 0.6068254 124 6 0.510159 93 7 0.616917 172 7 0.5260680 286 7 0.6942770 387 8 0.820944 293 8 0.6269407 186 7 0.820296 148 6 0.599875 242 7 0.3333333 9 0 0.729650 170 6 0.7343833 360 7 0.484311 314 7 0.5164187 278 7 0.499551 276 8 0.429867 204 8 0.552831 217 7 0.812862 0.6889410 0.610461 0.7744126 0.742395 0.757608 0.819231 0.806269 0.7445253 0.811991 0.840123 0.803567 0.6345664 0.786596 0.778351 0.747570 0.659808 0.552028 0.7079129 0.7567919 0.801671 0.829010 0.772053 0.7438656 0.711071 0.7561554 0.6392135 0.779960 0.726742 0.7170139 0.7459127 0.912126 0.8298588 0.865157 0.8122374 0.8204751 0.8496973 0.7327250 0.609653 0.5316340 0.5174967 0.4890401 0.5912053 5 0.707534 0.713118 -0.00997167 7 0.497699 0.514964 -0.01726483 9.4176e-01 7.9827e-01 insignificant 1.000000 1.0000000 insignificant 0.969632 0.92743749 insignificant 1 1.00000 insignificant -0.02391559 0.5229661 insignificant 1 insignificant 0.707093 0.8260090 -0.0712419 7 0.503755 0.5466511 -0.0428959 9.2277e-01 4.0928e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant 9.9975e-01 6.7693e-02 insignificant 1.0000e+00 1.000000 insignificant -0.0208524 7.8634e-01 insignificant 1.0000e+00 insignificant 0.707026 0.4988363 0.1935620 8 0.503255 0.442679 0.06057508 9.9131e-08 9.5402e-01 weaklyHypermeth 9.0119e-06 1.0000e+00 weaklyHypermeth 6.6863e-04 9.9239e-01 weaklyHypermeth 3.3719e-02 1.0000000 weaklyHypermeth 0.12329824 1.1889e-03 weaklyHypermeth 0.0792598 weaklyHypermeth 0.715002 0.8265948 -6.5412e-02 7 0.565860 0.5551331 0.01072662 8.6483e-01 0.02404290 weaklyHypometh 1.0000e+00 1.000000 insignificant 9.9734e-01 0.12276287 insignificant 1.0000e+00 1.000000 insignificant 0.0030631 9.6860e-01 insignificant 1.0000e+00 insignificant 0.714286 0.4984448 0.2152729 7 0.555727 0.433861 0.12186657 3.2551e-08 9.9452e-01 hypermethylated 3.2551e-06 1.00000000 hypermethylated 1.0666e-03 0.99904485 weaklyHypermeth 6.6665e-02 1.000000 weaklyHypermeth 1.4721e-01 7.0174e-04 weaklyHypermeth 0.087718 weaklyHypermeth 0.8274933 0.5000000 0.2937807 7 0.6460422 0.512745 0.13329751 2.3384e-09 9.8442e-01 hypermethylated 7.7945e-07 1.0000e+00 hypermethylated 9.9017e-03 9.9878e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.1441507 9.5222e-02 insignificant 1.0000e+00 insignificant chr10 104979050 104980050 37243 ENSG00000219818 0.7861705 185 5 0.7046213 105 5 0.6397045 118 5 0.704701 77 5 0.790556 51 5 0.758658 212 5 0.8892857 54 4 0.726695 96 5 0.674883 70 5 0.825600 96 5 0.822471 122 5 0.660317 58 5 0.810389 78 5 1.000000 3 0 0.802567 71 5 0.652092 52 5 0.772800 91 5 0.766269 99 5 0.799902 143 5 0.835473 184 5 0.70251 56 4 0.7747669 49 4 0.823328 110 5 0.822917 53 4 0.900000 18 1 0.7645515 154 5 0.6698413 78 4 0.817857 27 3 0.728994 104 5 0.7950436 152 5 0.6782220 166 5 0.833392 316 5 0.6331762 108 5 0.664250 95 5 0.761655 109 5 0.7616959 65 4 0.677778 60 4 0.6583470 134 5 0.809401 159 5 0.7753623 178 5 0.764001 100 5 0.735469 145 5 0.805033 191 5 0.876847 0.8051598 0.679405 0.7624434 0.921046 0.803731 0.923004 0.769295 0.6827386 0.903843 0.894922 0.732105 0.8187479 NA 0.820353 0.741121 0.818022 0.848254 0.8708016 0.8633856 0.754298 0.785948 0.861810 0.8328231 0.891176 0.8294919 0.6735444 0.825925 0.776010 0.8671309 0.7605973 0.883523 0.6595176 0.672950 0.8173865 0.8254472 0.8549020 0.7347971 0.853437 0.8559897 0.8241229 0.7564275 0.8560836 4 0.779644 0.794232 -0.00793715 5 0.759399 0.768782 -0.00938315 7.6363e-01 4.3223e-01 insignificant 1.000000 1.0000000 insignificant 0.607183 0.51374752 insignificant 1 1.00000 insignificant -0.00479417 0.8655317 lowCoverage 1 lowCoverage 0.779644 0.7320490 0.0591821 5 0.759399 0.7034415 0.0559578 4.1254e-03 9.5661e-01 weaklyHypermeth 3.8580e-02 1.00000000 weaklyHypermeth 1.0061e-02 9.6582e-01 weaklyHypermeth 1.4373e-01 1.000000 insignificant 0.0783407 2.0533e-02 lowCoverage 3.7332e-01 lowCoverage 0.779644 0.7981889 -0.0249136 5 0.759399 0.781615 -0.02221602 7.0171e-01 7.0026e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 7.9691e-01 1.3784e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.00669547 7.8121e-01 lowCoverage 1.0000000 lowCoverage 0.794232 0.7320490 6.3263e-02 5 0.768782 0.7034415 0.06534093 1.0587e-03 0.89260030 weaklyHypermeth 1.1778e-02 1.000000 weaklyHypermeth 6.4620e-03 0.79172675 weaklyHypermeth 1.0257e-01 1.000000 insignificant 0.0831349 1.7118e-02 lowCoverage 3.1205e-01 lowCoverage 0.794232 0.7981889 -0.0153209 5 0.768782 0.781615 -0.01283286 6.6750e-01 1.8921e-01 insignificant 1.0000e+00 1.00000000 insignificant 6.9977e-01 0.22133237 insignificant 1.0000e+00 1.000000 insignificant -1.9013e-03 9.3886e-01 lowCoverage 1.000000 lowCoverage 0.7320490 0.7981889 -0.0776217 5 0.7034415 0.781615 -0.07817379 9.8514e-01 1.6791e-03 weaklyHypometh 1.0000e+00 2.3650e-02 weaklyHypometh 9.9243e-01 2.9369e-03 weaklyHypometh 1.0000e+00 6.6748e-02 weaklyHypometh -0.0850362 1.2169e-02 lowCoverage 2.5892e-01 lowCoverage chr10 105369150 105370150 37252 NEURL ENSG00000107954 0.9297818 422 10 0.8546097 253 10 0.9071728 255 10 0.911462 445 10 0.944638 140 10 0.858012 559 10 0.8954140 243 10 0.904986 245 10 0.891983 305 10 0.928714 286 10 0.815127 312 10 0.881002 146 10 0.923292 373 10 0.922037 161 10 0.931662 319 10 0.894958 102 10 0.832457 62 6 0.670638 541 10 0.909092 211 10 0.912301 361 10 0.66422 102 6 0.8929374 266 10 0.813263 306 10 0.925496 158 10 0.932920 189 10 0.9256522 263 11 0.7938993 270 10 0.826037 209 10 0.934547 252 10 0.9179507 349 10 0.9135237 331 11 0.903000 451 10 0.3459133 310 10 0.443304 189 10 0.321488 193 7 0.4886184 145 9 0.447466 253 11 0.4059648 318 10 0.921184 418 10 0.9405931 385 10 0.908116 416 10 0.899659 424 10 0.906120 434 10 0.907492 0.8321358 0.897503 0.8842155 0.939539 0.876696 0.880525 0.898862 0.8845009 0.928306 0.904614 0.849243 0.9044355 0.914448 0.908612 0.880765 0.834660 0.864487 0.8921780 0.9022967 0.798062 0.878623 0.893908 0.9301078 0.927285 0.9188881 0.8525870 0.877375 0.926757 0.8939034 0.8934905 0.892376 0.2809907 0.368056 0.3135146 0.4078475 0.4015356 0.3064702 0.891179 0.9126899 0.8935740 0.8682540 0.8840285 10 0.893324 0.892812 0.00109440 10 0.844569 0.834964 0.00960538 3.6178e-01 6.2424e-01 insignificant 1.000000 1.0000000 insignificant 0.529941 0.73728473 insignificant 1 1.00000 insignificant 0.01567971 0.5720027 insignificant 1 insignificant 0.893461 0.3849432 0.5061273 10 0.873283 0.4153887 0.4578944 1.2098e-100 1.0000e+00 hypermethylated 1.2098e-97 1.00000000 hypermethylated 5.2498e-17 9.9999e-01 hypermethylated 1.3125e-14 1.000000 hypermethylated 0.4771745 2.4133e-07 hypermethylated 2.0111e-05 hypermethylated 0.893250 0.9022629 -0.0057467 10 0.825338 0.927964 -0.10262615 7.1856e-01 1.0286e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.2525e-01 3.4556e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.02916747 7.2264e-02 insignificant 0.9033016 insignificant 0.893244 0.3849432 4.9958e-01 10 0.848988 0.4153887 0.43359971 1.2076e-60 0.99999953 hypermethylated 4.0253e-58 1.000000 hypermethylated 3.1677e-15 0.99987994 hypermethylated 6.3354e-13 1.000000 hypermethylated 0.4614948 1.0513e-08 hypermethylated 1.7522e-06 hypermethylated 0.894166 0.9022158 -0.0058121 10 0.880734 0.921961 -0.04122701 8.4044e-01 9.8422e-02 insignificant 1.0000e+00 1.00000000 insignificant 6.9617e-01 0.16290115 insignificant 1.0000e+00 1.000000 insignificant -4.4847e-02 9.2473e-02 insignificant 1.000000 insignificant 0.3847252 0.9021687 -0.5129342 10 0.4141903 0.914867 -0.50067677 1.0000e+00 7.8096e-40 hypomethylated 1.0000e+00 7.8096e-37 hypomethylated 1.0000e+00 1.8940e-10 hypomethylated 1.0000e+00 4.7349e-08 hypomethylated -0.5063420 2.3270e-06 hypomethylated 1.1635e-03 hypomethylated chr10 105528050 105529050 37258 SH3PXD2A ENSG00000107957 0.8523810 130 6 0.6633700 61 4 0.5263187 71 5 0.767675 91 4 0.924354 58 3 0.722393 161 7 0.6702381 75 6 0.810374 102 6 0.823542 69 5 0.830032 70 5 0.863891 130 5 0.855072 25 1 0.813901 87 4 0.820106 23 3 0.667143 81 4 0.645833 36 3 0.904938 37 2 0.765605 143 6 0.803566 92 5 0.750929 138 6 0.72250 62 4 0.8313492 66 4 0.837912 69 3 0.860714 53 5 0.712075 46 6 0.8366842 105 6 0.9269231 83 3 0.880952 38 3 0.852046 87 5 0.7681850 79 4 0.7324662 106 6 0.772022 200 7 0.6244164 69 4 0.518741 108 4 0.492328 73 4 0.8369963 28 2 0.802284 57 4 0.6902686 93 4 0.759322 94 5 0.8162028 133 5 0.781095 107 6 0.860611 90 3 0.788299 131 7 0.811648 0.5539927 0.587084 0.7877983 0.854095 0.694761 0.595476 0.804025 0.7600972 0.807043 0.806195 0.794625 0.7741260 0.804519 0.756637 0.696317 0.836043 0.782172 0.7216196 0.7106169 0.742238 0.770699 0.815018 0.8930952 0.830748 0.7882462 0.8951994 0.853968 0.787550 0.7759420 0.7053254 0.780273 0.4444018 0.486728 0.2753968 0.7472527 0.7054572 0.7489084 0.749913 0.7423034 0.8103623 0.8113455 0.8339138 2 0.727976 0.802817 -0.04668778 5 0.748472 0.799718 -0.05124622 9.8181e-01 2.8913e-02 weaklyHypometh 1.000000 0.8195196 insignificant 0.859158 0.13810130 insignificant 1 1.00000 insignificant -0.03706927 0.2221391 lowCoverage 1 lowCoverage 0.727976 0.5724299 0.1989863 4 0.748472 0.6290578 0.1194141 4.5780e-05 9.8784e-01 lowCoverage 6.1865e-04 1.00000000 lowCoverage 2.3100e-02 9.9615e-01 lowCoverage 2.6250e-01 1.000000 lowCoverage 0.1132440 1.1528e-01 lowCoverage 1.0000e+00 lowCoverage 0.727976 0.7585586 -0.0527663 5 0.748472 0.797736 -0.04926375 9.6865e-01 2.1359e-02 weaklyHypometh 1.0000e+00 6.2820e-01 insignificant 6.8287e-01 2.7887e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.02702279 3.5151e-01 lowCoverage 1.0000000 lowCoverage 0.802817 0.5724299 2.5409e-01 4 0.799718 0.6290578 0.17066037 7.0494e-06 0.99782411 lowCoverage 1.0521e-04 1.000000 lowCoverage 3.4055e-03 0.99580895 lowCoverage 5.9745e-02 1.000000 lowCoverage 0.1503133 4.9066e-02 lowCoverage 6.1922e-01 lowCoverage 0.802817 0.7585586 -0.0109530 5 0.799718 0.797736 0.00198247 7.4240e-01 2.1654e-01 insignificant 1.0000e+00 1.00000000 insignificant 5.8652e-01 0.70423194 insignificant 1.0000e+00 1.000000 insignificant 1.0046e-02 7.0899e-01 lowCoverage 1.000000 lowCoverage 0.5724299 0.7585586 -0.2616046 4 0.6290578 0.797736 -0.16867789 9.7442e-01 2.3529e-03 lowCoverage 1.0000e+00 3.1795e-02 lowCoverage 9.7069e-01 2.5718e-02 lowCoverage 1.0000e+00 3.4693e-01 lowCoverage -0.1402668 6.1449e-02 lowCoverage 7.8781e-01 lowCoverage chr10 112161750 112162750 37323 SMNDC1 ENSG00000119953 0.9060317 142 5 0.7325877 109 5 0.8383167 91 3 0.861667 111 5 0.681494 45 4 0.815146 264 5 0.6881133 58 4 0.706666 87 5 0.717827 73 4 0.805238 62 5 0.854612 146 5 0.788636 43 3 0.807527 91 5 0.619048 15 2 0.860952 79 4 0.483810 38 3 0.876329 44 3 0.664339 146 5 0.916429 101 5 0.809420 177 5 0.85234 51 4 0.8816117 67 5 0.844524 83 4 0.904942 58 5 0.851429 50 5 0.6651098 174 5 0.8706183 58 4 0.740952 41 3 0.768910 80 4 0.8022209 173 5 0.8334268 166 5 0.836625 236 5 0.7946199 99 4 0.884432 71 5 0.804913 133 4 0.7702020 30 3 0.775152 59 4 0.8521044 149 5 0.702285 108 4 0.9189091 140 5 0.879965 112 5 0.839319 148 5 0.872671 108 5 0.884706 0.7568816 0.732212 0.8298611 0.712730 0.844822 0.846334 0.868587 0.7826475 0.802331 0.855024 0.742424 0.7847316 0.790895 0.888839 0.666245 0.829710 0.811231 0.9146825 0.8144850 0.872122 0.861321 0.832143 0.9222132 0.883780 0.7943411 0.8594929 0.796726 0.787760 0.8381911 0.8426486 0.813703 0.7504112 0.851385 0.8070232 0.6974593 0.7935606 0.7754669 0.859410 0.9097727 0.8963906 0.8654688 0.8955467 3 0.826743 0.833468 -0.01535616 5 0.720197 0.801356 -0.08115865 9.5612e-01 2.2339e-01 insignificant 1.000000 1.0000000 insignificant 0.968274 0.08300908 insignificant 1 1.00000 insignificant -0.04934973 0.1234007 lowCoverage 1 lowCoverage 0.826743 0.7985213 0.0225466 5 0.720197 0.8439201 -0.1237226 4.6518e-01 3.3214e-01 insignificant 1.0000e+00 1.00000000 insignificant 3.9430e-01 2.5195e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0418611 1.8556e-01 lowCoverage 1.0000e+00 lowCoverage 0.827946 0.8977273 -0.0625016 5 0.814237 0.873416 -0.05917876 9.9840e-01 8.1648e-03 weaklyHypometh 1.0000e+00 3.7393e-01 insignificant 9.8774e-01 8.6044e-03 weaklyHypometh 1.0000e+00 0.5377743 insignificant -0.07092044 1.5072e-01 lowCoverage 1.0000000 lowCoverage 0.833468 0.7985213 3.7734e-02 5 0.801356 0.8439201 -0.04256399 9.2450e-02 0.58626366 insignificant 6.6263e-01 1.000000 insignificant 4.2598e-02 0.65877664 weaklyHypermeth 3.9081e-01 1.000000 insignificant 0.0074886 7.8429e-01 lowCoverage 1.0000e+00 lowCoverage 0.833874 0.8977273 -0.0475452 5 0.828294 0.873416 -0.04512172 9.9235e-01 1.2233e-02 weaklyHypometh 1.0000e+00 0.58909329 insignificant 9.7085e-01 0.06492175 insignificant 1.0000e+00 1.000000 insignificant -2.1571e-02 6.2550e-01 lowCoverage 1.000000 lowCoverage 0.7977737 0.8977273 -0.0872140 5 0.8127041 0.873416 -0.06071159 9.8072e-01 7.0661e-04 weaklyHypometh 1.0000e+00 1.1397e-02 weaklyHypometh 8.8365e-01 1.0843e-03 weaklyHypometh 1.0000e+00 3.3883e-02 weaklyHypometh -0.0290593 5.1174e-01 lowCoverage 1.0000e+00 lowCoverage chr10 113702350 113703350 37393 ENSG00000220136 0.9436087 173 6 0.9870130 44 5 0.8957851 108 7 0.872178 124 5 0.943452 52 7 0.847598 144 7 0.8668934 49 6 0.857143 19 1 0.773810 45 6 0.845536 47 6 0.945300 128 7 0.880208 32 3 0.920635 41 4 NA 0 0 0.762500 40 4 0.768254 30 4 0.784659 40 4 0.970328 106 5 0.795833 36 4 0.910266 151 7 0.91667 7 0 0.7916667 30 1 0.881543 100 6 0.862500 18 1 1.000000 5 0 0.9027273 72 5 0.9125000 30 3 1.000000 8 0 0.721726 24 1 0.5884503 50 5 0.9095384 73 5 0.843564 201 8 0.7221501 71 5 0.547619 22 3 0.921070 169 7 0.6484127 28 3 0.907407 33 4 0.8293561 52 4 0.881024 152 6 0.9391571 191 6 0.933383 159 6 0.912500 155 6 0.951824 153 6 0.901761 0.9978355 0.880071 0.9243912 0.916100 0.869416 0.804611 0.857143 0.6439909 0.859694 0.951516 0.768849 0.8597884 NA 0.738095 0.804611 0.729437 0.973785 0.8452381 0.8653941 0.867817 0.759921 0.862695 0.8428571 0.958130 0.8877706 0.9357143 0.994801 0.824546 0.7696324 0.8933864 0.832952 0.6685185 0.936508 0.9450518 0.8100334 0.8855820 0.8192280 0.937948 0.9329193 0.9636716 0.9285714 0.9660588 0 0.891412 0.846278 0.04412841 5 0.897206 0.849232 0.04797427 2.9619e-02 9.9243e-01 weaklyHypermeth 1.000000 1.0000000 insignificant 0.435233 0.54644393 insignificant 1 1.00000 insignificant 0.01125105 0.7660878 lowCoverage 1 lowCoverage 0.891412 0.8586667 0.0360891 4 0.897206 0.8479029 0.0493033 3.3403e-02 9.9412e-01 lowCoverage 2.5499e-01 1.00000000 lowCoverage 6.7216e-03 9.8276e-01 lowCoverage 1.0341e-01 1.000000 lowCoverage 0.1094888 1.3562e-01 lowCoverage 1.0000e+00 lowCoverage 0.891412 0.9444444 -0.0501109 5 0.897206 0.925445 -0.02823864 9.2152e-01 8.7420e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3874e-01 1.1288e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.05141949 2.1659e-02 lowCoverage 0.4331741 lowCoverage 0.846278 0.8586667 -1.0025e-02 4 0.849232 0.8479029 0.00132902 4.3395e-01 0.66142396 lowCoverage 1.0000e+00 1.000000 lowCoverage 7.1519e-02 0.97977781 lowCoverage 5.9107e-01 1.000000 lowCoverage 0.0982377 1.9476e-01 lowCoverage 1.0000e+00 lowCoverage 0.846278 0.9444444 -0.0928387 5 0.849232 0.925445 -0.07621291 9.9358e-01 9.8630e-04 weaklyHypometh 1.0000e+00 0.08219177 weaklyHypometh 9.7806e-01 0.31434610 insignificant 1.0000e+00 1.000000 insignificant -6.2671e-02 1.0155e-01 lowCoverage 1.000000 lowCoverage 0.8586667 0.9444444 -0.0659869 4 0.8479029 0.925445 -0.07754193 9.9806e-01 6.2982e-03 lowCoverage 1.0000e+00 7.3235e-02 lowCoverage 9.9795e-01 4.1613e-02 lowCoverage 1.0000e+00 5.1374e-01 lowCoverage -0.1609083 4.5492e-02 lowCoverage 6.8675e-01 lowCoverage chr10 114822750 114823750 37438 ENSG00000179487 0.7394945 265 5 0.6412920 241 5 0.5009104 118 5 0.803254 243 5 0.725056 96 5 0.795478 351 5 0.6840336 154 5 0.677950 140 5 0.501578 109 5 0.654248 87 5 0.840773 203 5 0.550000 60 5 0.468486 98 5 0.805528 56 3 0.793975 125 5 0.856322 97 5 0.850000 24 2 0.536826 323 5 0.501812 110 5 0.677000 216 5 0.78096 58 5 0.6351852 67 2 0.822966 173 5 0.506373 105 5 0.697573 100 5 0.7267615 219 5 0.6855940 161 5 0.387840 51 4 0.748000 185 5 0.7730920 212 5 0.6618959 238 5 0.833903 264 5 0.3355536 134 5 0.283208 120 5 0.396721 184 4 0.9333333 16 2 0.185849 177 5 0.8255683 207 5 0.626238 263 5 0.7041311 210 5 0.751237 260 5 0.546265 212 5 0.702042 285 5 0.727393 0.6282611 0.492796 0.7638745 0.722532 0.802655 0.661711 0.660173 0.5992685 0.769319 0.773559 0.672797 0.5616583 0.814725 0.735076 0.757167 0.676109 0.525284 0.4950094 0.7177053 0.726038 0.602384 0.828655 0.6161343 0.703280 0.7155336 0.6660359 0.502891 0.742069 0.7211311 0.6407437 0.802993 0.3270486 0.358367 0.4176873 0.5771351 0.2822865 0.8250173 0.742910 0.6356439 0.6961750 0.5433323 0.6943982 5 0.682612 0.705947 -0.02830036 5 0.659599 0.684274 -0.02467535 9.3780e-01 1.0845e-01 insignificant 1.000000 1.0000000 insignificant 0.891813 0.20700972 insignificant 1 1.00000 insignificant -0.00814425 0.8661067 lowCoverage 1 lowCoverage 0.682683 0.3961814 0.2631033 5 0.619699 0.3263589 0.2933402 3.5325e-05 9.9988e-01 hypermethylated 4.9063e-04 1.00000000 hypermethylated 2.0237e-02 9.9967e-01 weaklyHypermeth 2.4092e-01 1.000000 insignificant 0.1868286 2.0293e-01 lowCoverage 1.0000e+00 lowCoverage 0.682612 0.7000000 0.0205371 5 0.659599 0.668979 -0.00937986 5.0480e-01 2.2840e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.2440e-01 3.3036e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.01421819 7.6592e-01 lowCoverage 1.0000000 lowCoverage 0.705947 0.3971292 2.9027e-01 5 0.684274 0.4351452 0.24912894 2.2075e-06 0.99826522 hypermethylated 3.7415e-05 1.000000 hypermethylated 1.1506e-02 0.99633254 weaklyHypermeth 1.6206e-01 1.000000 insignificant 0.1949728 1.8966e-01 lowCoverage 1.0000e+00 lowCoverage 0.705947 0.7000000 0.0482296 5 0.684274 0.668979 0.01529549 2.1599e-01 6.9985e-01 insignificant 1.0000e+00 1.00000000 insignificant 2.6678e-01 0.75557816 insignificant 1.0000e+00 1.000000 insignificant 2.2362e-02 6.7524e-01 lowCoverage 1.000000 lowCoverage 0.3971292 0.7000000 -0.2342108 5 0.4351452 0.668979 -0.23383345 9.9768e-01 3.4995e-03 weaklyHypometh 1.0000e+00 4.5448e-02 weaklyHypometh 9.9793e-01 4.5526e-02 weaklyHypometh 1.0000e+00 5.4197e-01 insignificant -0.1726104 2.3766e-01 lowCoverage 1.0000e+00 lowCoverage chr10 119434450 119435450 37509 EMX2 ENSG00000170370 0.8555467 300 7 0.7052303 155 9 0.7580611 244 9 0.791058 227 8 0.789980 145 9 0.752669 362 9 0.7702573 195 9 0.731733 175 9 0.778794 159 9 0.774897 171 8 0.760801 214 9 0.884845 137 7 0.828373 151 7 0.769841 70 5 0.765305 176 8 0.678723 68 7 0.887122 66 4 0.801713 261 6 0.884493 130 7 0.790551 303 9 0.82216 101 9 0.7533221 100 5 0.863097 241 8 0.883450 153 8 0.828922 57 3 0.8565130 169 9 0.6409138 225 8 0.739188 141 9 0.619123 148 7 0.8395101 213 9 0.8554348 186 9 0.936429 340 9 0.4162387 262 9 0.412103 215 7 0.291503 143 8 0.6680375 73 3 0.444583 176 9 0.4290700 330 8 0.687174 456 8 0.7646179 341 8 0.760925 250 6 0.659012 358 6 0.582659 292 8 0.831672 0.6290509 0.748451 0.7838467 0.776961 0.850329 0.765068 0.803781 0.7710601 0.832076 0.825736 0.876738 0.8199094 0.787385 0.809063 0.828737 0.763918 0.765805 0.8564646 0.7808225 0.897906 0.756940 0.841849 0.8312865 0.803043 0.8135710 0.7050166 0.797072 0.702570 0.8220429 0.8374506 0.924659 0.3094679 0.569017 0.5310000 0.4604213 0.5580446 0.5148201 0.843973 0.7834681 0.7325316 0.7899818 0.7193256 6 0.795038 0.836548 -0.03926591 9 0.719293 0.764427 -0.04513404 9.7721e-01 1.6609e-02 weaklyHypometh 1.000000 0.7221372 insignificant 0.968959 0.11767537 insignificant 1 1.00000 insignificant -0.01517233 0.6271090 insignificant 1 insignificant 0.795412 0.3994996 0.3965073 9 0.757755 0.4263088 0.3314458 7.4827e-39 1.0000e+00 hypermethylated 7.4827e-37 1.00000000 hypermethylated 2.9799e-08 1.0000e+00 hypermethylated 1.6555e-06 1.000000 hypermethylated 0.3444104 7.0807e-04 hypermethylated 2.3570e-02 hypermethylated 0.795307 0.7536830 0.0270662 8 0.796216 0.655492 0.14072425 3.0008e-02 9.4822e-01 weaklyHypermeth 6.1242e-01 1.0000e+00 insignificant 1.9152e-01 9.9414e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.09712206 4.2441e-02 weaklyHypermeth 0.6736591 insignificant 0.836951 0.3984962 4.2471e-01 9 0.828129 0.3785012 0.44962820 2.9827e-29 0.99999975 hypermethylated 2.4856e-27 1.000000 hypermethylated 1.5606e-07 0.99999883 hypermethylated 8.2137e-06 1.000000 hypermethylated 0.3595828 2.1658e-04 hypermethylated 9.8447e-03 hypermethylated 0.836469 0.7535377 0.0661279 8 0.744796 0.626783 0.11801315 5.2913e-04 9.9657e-01 weaklyHypermeth 2.0351e-02 1.00000000 weaklyHypermeth 1.5230e-02 0.99517803 weaklyHypermeth 4.6152e-01 1.000000 insignificant 1.1229e-01 2.9427e-02 weaklyHypermeth 0.639719 insignificant 0.3998331 0.7541274 -0.3837201 8 0.4618345 0.710116 -0.24828172 9.9916e-01 1.9636e-16 hypomethylated 1.0000e+00 1.7851e-14 hypomethylated 9.9995e-01 2.3612e-04 hypomethylated 1.0000e+00 1.1244e-02 hypomethylated -0.2472884 3.1588e-03 weaklyHypometh 1.3589e-01 insignificant chr10 120448250 120449250 37518 ENSG00000178029 0.7612772 286 7 0.7347343 466 7 0.6405605 275 6 0.908814 140 7 0.658918 234 7 0.715329 351 7 0.7132497 229 7 0.717380 231 7 0.542949 268 6 0.768982 264 6 0.722154 403 7 0.581006 207 6 0.751349 256 6 0.701754 96 5 0.687229 235 7 0.678627 120 6 0.716902 298 7 0.779754 153 6 0.766515 268 6 0.600145 283 7 0.67954 122 6 0.7122891 116 2 0.646619 310 6 0.727284 181 7 0.754252 134 6 0.6655185 423 7 0.6164487 234 6 0.756919 144 5 0.787872 178 6 0.6746381 353 7 0.7934308 335 7 0.711397 456 7 0.6819466 343 7 0.728424 175 6 0.807643 556 7 0.8037458 158 6 0.690189 191 7 0.6928240 363 7 0.683831 265 7 0.7837821 236 7 0.828524 302 7 0.727226 245 6 0.774234 205 7 0.800126 0.7109424 0.725962 0.9170563 0.729900 0.764020 0.805384 0.763213 0.7554229 0.790997 0.773162 0.773279 0.7942228 0.804530 0.786087 0.720752 0.765089 0.821796 0.7903786 0.7703525 0.777375 0.755525 0.746527 0.7784436 0.880207 0.7927878 0.7437849 0.764965 0.861580 0.7858469 0.7858871 0.784915 0.7442046 0.739868 0.7807941 0.8095874 0.7479595 0.7393927 0.788251 0.8532290 0.8709197 0.7967511 0.8407850 6 0.765752 0.799732 -0.01243944 7 0.749130 0.702641 0.04648953 2.5392e-01 3.3158e-01 insignificant 1.000000 1.0000000 insignificant 0.712258 0.45840586 insignificant 1 1.00000 insignificant -0.00313556 0.8974092 insignificant 1 insignificant 0.765613 0.7642777 0.0114819 7 0.717772 0.7606747 -0.0429029 1.4023e-01 3.2005e-01 insignificant 9.4752e-01 1.00000000 insignificant 1.2230e-01 2.8395e-01 insignificant 9.5548e-01 1.000000 insignificant -0.0267471 3.8459e-01 insignificant 1.0000e+00 insignificant 0.765613 0.8116520 -0.0547391 7 0.717772 0.786464 -0.06869189 6.6182e-01 2.3479e-03 weaklyHypometh 1.0000e+00 1.6770e-01 insignificant 8.9255e-01 4.6020e-03 weaklyHypometh 1.0000e+00 0.3877982 insignificant -0.05213789 1.2380e-01 insignificant 1.0000000 insignificant 0.800201 0.7642777 3.2250e-02 7 0.748804 0.7606747 -0.01187033 9.2768e-02 0.59240837 insignificant 6.6263e-01 1.000000 insignificant 1.4913e-01 0.82313829 insignificant 1.0000e+00 1.000000 insignificant -0.0236116 4.2797e-01 insignificant 1.0000e+00 insignificant 0.800201 0.8116520 -0.0425628 7 0.748804 0.786464 -0.03765928 9.9715e-01 6.2627e-02 insignificant 1.0000e+00 1.00000000 insignificant 9.7655e-01 0.20771133 insignificant 1.0000e+00 1.000000 insignificant -4.9002e-02 1.3868e-01 insignificant 1.000000 insignificant 0.7642777 0.8116520 -0.0645101 7 0.7606747 0.786464 -0.02578895 8.8955e-01 3.7543e-03 weaklyHypometh 1.0000e+00 4.8132e-02 weaklyHypometh 9.3241e-01 2.2411e-02 weaklyHypometh 1.0000e+00 3.1564e-01 insignificant -0.0253908 4.7764e-01 insignificant 1.0000e+00 insignificant chr10 120880250 120881250 37532 FAM45A ENSG00000119979 0.6782112 277 8 0.5902200 171 8 0.5971547 122 6 0.744713 253 8 0.581133 75 6 0.577410 673 8 0.4969003 123 8 0.718450 181 8 0.524185 114 6 0.675023 112 6 0.761009 268 8 0.726712 78 6 0.822115 155 8 0.806250 27 4 0.642718 160 6 0.533433 71 6 0.534940 72 5 0.703300 199 8 0.783161 226 8 0.767257 573 8 0.62045 108 6 0.7168783 198 6 0.721466 195 8 0.547380 263 7 0.744077 174 6 0.6389577 228 8 0.5798410 302 7 0.765531 159 6 0.638126 122 5 0.6838180 215 8 0.7052882 266 8 0.704509 425 8 0.3880322 111 7 0.621915 102 8 0.714871 197 8 0.6743881 120 5 0.616079 138 8 0.7191490 288 8 0.709392 264 8 0.6646038 296 8 0.771737 286 8 0.672696 256 6 0.718330 245 8 0.722751 0.6481432 0.683080 0.7674563 0.594504 0.728672 0.627105 0.712633 0.6232164 0.755212 0.812244 0.701514 0.8238639 0.731686 0.680612 0.646040 0.597734 0.761615 0.7935813 0.7945784 0.715151 0.771388 0.741338 0.7337155 0.742888 0.7098531 0.7784895 0.739853 0.669190 0.7496710 0.8188400 0.740557 0.5657098 0.643069 0.7343735 0.7323334 0.6625342 0.6875769 0.762020 0.7950266 0.7756160 0.6999122 0.7802711 6 0.739695 0.751036 -0.00841608 8 0.624199 0.615751 0.00844798 7.2509e-01 5.7918e-01 insignificant 1.000000 1.0000000 insignificant 0.927119 0.34840346 insignificant 1 1.00000 insignificant -0.00897867 0.7673151 insignificant 1 insignificant 0.739695 0.6694561 0.0628581 8 0.624199 0.6520511 -0.0278523 2.9469e-03 9.6468e-01 weaklyHypermeth 3.0070e-02 1.00000000 weaklyHypermeth 8.4813e-02 9.5293e-01 insignificant 7.2489e-01 1.000000 insignificant 0.0408089 4.8306e-01 insignificant 1.0000e+00 insignificant 0.739695 0.7728285 -0.0316553 8 0.624199 0.719330 -0.09513150 8.6949e-01 5.1714e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6045e-01 4.8928e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant -0.04413711 1.5838e-01 insignificant 1.0000000 insignificant 0.751036 0.6694561 7.0557e-02 8 0.615751 0.6520511 -0.03630031 8.0761e-04 0.97095328 weaklyHypermeth 9.4024e-03 1.000000 weaklyHypermeth 4.2488e-02 0.98147966 weaklyHypermeth 3.9081e-01 1.000000 insignificant 0.0497876 3.8771e-01 insignificant 1.0000e+00 insignificant 0.751036 0.7728285 -0.0244169 8 0.615751 0.719330 -0.10357949 8.8758e-01 2.7831e-01 insignificant 1.0000e+00 1.00000000 insignificant 9.1403e-01 0.36173079 insignificant 1.0000e+00 1.000000 insignificant -3.5158e-02 2.2101e-01 insignificant 1.000000 insignificant 0.6694561 0.7728285 -0.0961427 8 0.6520511 0.719330 -0.06727917 8.5360e-01 1.2610e-03 weaklyHypometh 1.0000e+00 1.8821e-02 weaklyHypometh 9.9793e-01 1.8804e-02 weaklyHypometh 1.0000e+00 2.6863e-01 insignificant -0.0849460 1.6183e-01 insignificant 1.0000e+00 insignificant chr10 121002650 121003650 37541 ENSG00000211177,ENSG00000222283 0.7277678 212 5 0.5402151 155 5 0.4809253 119 5 0.682007 203 5 0.385622 97 5 0.594560 306 5 0.5933166 102 5 0.684959 185 5 0.537144 202 5 0.510401 101 5 0.597588 156 5 0.406944 88 5 0.116234 289 5 0.453853 100 5 0.554780 201 5 0.435338 75 5 0.347815 99 5 0.332091 235 5 0.271111 92 5 0.424547 197 5 0.63000 75 5 0.2125988 165 5 0.669432 103 5 0.736296 82 5 0.438261 109 5 0.4215568 231 5 0.3543590 67 5 0.176637 73 5 0.636029 119 5 0.3472201 267 5 0.4690496 241 5 0.851533 192 5 0.0080000 156 5 0.000000 74 5 0.000000 268 5 0.0000000 42 5 0.016082 145 5 0.0000000 197 5 0.328119 294 5 0.2793681 208 5 0.225263 202 5 0.185484 183 5 0.531290 170 5 0.726008 0.5340093 0.468352 0.6766407 0.377434 0.591489 0.584559 0.674743 0.5313130 0.500475 0.599888 0.402002 0.1115748 0.446138 0.546756 0.419301 0.335820 0.329979 0.2673933 0.4214478 0.634911 0.204658 0.664930 0.7140781 0.429461 0.4133551 0.3524907 0.174076 0.621404 0.3415538 0.4652713 0.845697 0.0077384 0.000000 0.0000000 0.0000000 0.0174443 0.0000000 0.312143 0.2717903 0.2159616 0.1777133 0.5241943 5 0.486932 0.468677 0.01315079 5 0.490714 0.479911 0.01080300 4.9040e-01 6.8494e-01 insignificant 1.000000 1.0000000 insignificant 0.655651 0.59363978 insignificant 1 1.00000 insignificant -0.01138674 0.8715488 insignificant 1 insignificant 0.486932 0.0034014 0.4783407 5 0.490714 0.0034235 0.4872902 2.9799e-24 1.0000e+00 hypermethylated 1.5684e-22 1.00000000 hypermethylated 8.8121e-15 1.0000e+00 hypermethylated 1.1015e-12 1.000000 hypermethylated 0.4798473 1.2137e-11 hypermethylated 2.4274e-09 hypermethylated 0.486932 0.3008515 0.1817117 5 0.490714 0.311163 0.17955037 1.9705e-05 9.7866e-01 weaklyHypermeth 1.0371e-03 1.0000e+00 weaklyHypermeth 1.9820e-05 9.9061e-01 weaklyHypermeth 1.9820e-03 1.0000000 weaklyHypermeth 0.17395625 4.1317e-02 weaklyHypermeth 0.6736591 insignificant 0.468677 0.0034014 4.6229e-01 5 0.479911 0.0034235 0.47648724 5.0709e-17 1.00000000 hypermethylated 2.3050e-15 1.000000 hypermethylated 2.4699e-12 1.00000000 hypermethylated 3.5284e-10 1.000000 hypermethylated 0.4912341 5.7325e-06 hypermethylated 5.2114e-04 hypermethylated 0.468677 0.3008515 0.1705709 5 0.479911 0.311163 0.16874736 2.9523e-03 9.9841e-01 weaklyHypermeth 7.9793e-02 1.00000000 weaklyHypermeth 1.4309e-03 0.99981733 weaklyHypermeth 7.9496e-02 1.000000 weaklyHypermeth 1.8534e-01 5.1623e-02 insignificant 0.938599 insignificant 0.0034014 0.3008515 -0.2847362 5 0.0034235 0.311163 -0.30773987 1.0000e+00 5.0215e-13 hypomethylated 1.0000e+00 3.1384e-11 hypomethylated 1.0000e+00 1.2993e-08 hypomethylated 1.0000e+00 1.8562e-06 hypomethylated -0.3058911 7.0989e-03 weaklyHypometh 2.1512e-01 insignificant chr10 121030350 121031350 37546 ENSG00000211177,ENSG00000222283 0.6180814 84 5 0.5504579 111 8 0.5208333 23 1 0.620325 92 7 0.537121 40 3 0.679624 102 7 0.5895833 38 5 0.589980 74 5 0.654762 31 4 0.451190 33 4 0.658221 137 7 0.777778 13 0 0.618750 46 5 0.564015 42 5 0.554563 32 4 0.500000 10 0 0.541667 37 3 0.608590 134 5 0.736490 127 5 0.553571 72 6 0.76705 44 2 0.5333333 7 0 0.634921 53 5 0.565476 55 7 0.808119 80 5 0.7159080 125 5 0.7383929 46 4 0.353125 26 2 0.631106 138 6 0.7195477 174 8 0.6825732 116 5 0.623798 98 8 0.5362374 89 7 0.525800 101 6 0.533862 130 6 0.5000000 9 0 0.419251 96 8 0.6431698 134 8 0.614012 87 5 0.5535088 49 4 0.495556 59 5 0.626667 28 4 0.545617 65 4 0.407562 0.5456674 0.300546 0.4220712 0.397168 0.526256 0.443989 0.414195 0.4918033 0.449847 0.399939 0.715847 0.4262295 0.461811 0.473263 0.441552 0.574378 0.537003 0.5578076 0.3694379 0.634128 0.511098 0.485194 0.5757221 0.789607 0.5436087 0.6522248 0.497131 0.594085 0.5842468 0.4632994 0.550734 0.4209306 0.488815 0.4459624 0.4551810 0.3097545 0.4313136 0.424157 0.5050331 0.3777778 0.6275956 0.5206373 0 0.658575 0.783784 -0.06140964 5 0.618959 0.614853 0.00410558 9.9218e-01 7.4932e-03 weaklyHypometh 1.000000 0.4162895 insignificant 0.728157 0.19114534 insignificant 1 1.00000 insignificant -0.05149858 0.2121494 lowCoverage 1 lowCoverage 0.658575 0.5330948 0.1609762 5 0.618959 0.5896146 0.0293441 4.8262e-02 9.1422e-01 weaklyHypermeth 3.5487e-01 1.00000000 insignificant 7.9362e-02 9.8146e-01 insignificant 6.9615e-01 1.000000 insignificant 0.0698936 7.2208e-02 lowCoverage 9.1402e-01 lowCoverage 0.658556 0.5902778 0.0101571 5 0.612995 0.562644 0.05035158 5.4417e-02 5.2606e-01 insignificant 9.2789e-01 1.0000e+00 insignificant 8.1443e-02 5.4229e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.02920827 3.5223e-01 lowCoverage 1.0000000 lowCoverage 0.783784 0.5330948 2.5655e-01 7 0.614853 0.5896146 0.02523856 1.0482e-03 0.99998353 weaklyHypermeth 1.1778e-02 1.000000 weaklyHypermeth 2.8868e-02 0.99790033 weaklyHypermeth 3.0071e-01 1.000000 insignificant 0.1213921 1.8629e-02 lowCoverage 3.2683e-01 lowCoverage 0.784599 0.5902778 0.0806470 5 0.691710 0.562644 0.12906614 2.0449e-03 9.8982e-01 weaklyHypermeth 6.0145e-02 1.00000000 weaklyHypermeth 3.8495e-02 0.92802108 weaklyHypermeth 7.8626e-01 1.000000 insignificant 8.0707e-02 7.9656e-02 lowCoverage 1.000000 lowCoverage 0.5322581 0.5902778 -0.1314338 5 0.5383164 0.562644 -0.02432724 2.8001e-01 2.1550e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.8505e-01 2.8752e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0406853 3.1197e-01 lowCoverage 1.0000e+00 lowCoverage chr10 126142950 126143950 37596 LHPP ENSG00000107902 0.9052265 242 6 0.7663087 188 6 0.8549784 65 1 0.882504 231 5 0.865440 82 4 0.826966 257 5 0.6253230 67 4 0.887006 81 4 0.843750 61 1 0.837432 73 1 0.830147 193 6 0.633333 34 1 0.552083 91 1 0.897059 58 1 0.882883 86 1 0.754386 24 1 1.000000 195 1 0.895084 187 4 0.849287 172 3 0.822558 271 6 0.45556 26 3 0.8000000 5 0 0.917184 104 6 0.733333 51 5 0.964286 16 1 0.8724714 220 6 0.6714286 86 4 0.790741 35 4 0.939394 172 4 0.8900017 228 6 0.8801595 263 6 0.725338 258 4 0.8432770 162 6 0.924107 136 3 0.975275 166 4 1.0000000 9 0 0.795235 104 6 0.9485595 214 6 0.854182 255 5 0.8619259 264 4 0.886146 232 4 0.820513 145 1 0.679246 249 4 0.644789 0.6899502 0.663223 0.6401365 0.756657 0.722058 0.562016 0.667180 0.6818182 0.608793 0.620851 0.535718 0.4090909 0.700535 0.615889 0.564593 0.972082 0.668478 0.6453726 0.6175595 0.439394 1.000000 0.774986 0.4363636 0.896104 0.6764388 0.4272727 0.320202 0.735537 0.7082054 0.6660165 0.728305 0.5857104 0.668831 0.9280719 0.7663756 0.6645591 0.9239127 0.631926 0.6435328 0.5775472 0.5804196 0.6960171 1 0.709556 0.734973 -0.00523491 4 0.860581 0.729602 0.13097937 9.8655e-01 2.6447e-01 lowCoverage 1.000000 1.0000000 lowCoverage 0.270926 0.68768271 lowCoverage 1 1.00000 lowCoverage 0.01726327 0.7220962 lowCoverage 1 lowCoverage 0.708349 0.8394437 -0.0947427 4 0.814108 0.8971601 -0.0830522 9.9970e-01 1.3254e-02 lowCoverage 1.0000e+00 0.74022950 lowCoverage 9.8864e-01 1.1987e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage -0.0938212 4.0119e-02 lowCoverage 5.8143e-01 lowCoverage 0.709556 0.7395105 0.0585736 4 0.860581 0.734472 0.12610944 9.2873e-01 7.4137e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 5.5723e-01 9.8156e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 0.00018514 9.9675e-01 lowCoverage 1.0000000 lowCoverage 0.736121 0.8394437 -8.3940e-02 6 0.861691 0.8971601 -0.03546910 9.4432e-01 0.18363726 insignificant 1.0000e+00 1.000000 insignificant 9.5165e-01 0.30965321 insignificant 1.0000e+00 1.000000 insignificant -0.1110845 5.0776e-02 lowCoverage 6.1922e-01 lowCoverage 0.734973 0.7395105 0.0533232 4 0.729602 0.734472 -0.00486993 4.5080e-01 9.7603e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 5.7777e-01 0.89334182 lowCoverage 1.0000e+00 1.000000 lowCoverage -1.7078e-02 7.6247e-01 lowCoverage 1.000000 lowCoverage 0.8394437 0.7387863 0.1269770 4 0.8971601 0.812629 0.08453142 7.7798e-02 9.8701e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 1.0297e-01 9.9857e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0940063 8.9478e-02 lowCoverage 1.0000e+00 lowCoverage chr10 126306650 126307650 37599 ENSG00000203273 0.7598445 248 8 0.6581393 219 6 0.7762235 171 6 0.754417 232 8 0.849529 95 6 0.891526 260 6 0.7439632 171 6 0.870220 132 4 0.706496 132 5 0.944302 139 6 0.933805 153 6 0.786044 89 5 0.729853 152 5 0.875000 5 0 0.881633 101 5 0.753019 60 4 0.785021 112 5 0.885790 231 6 0.763095 136 6 0.580765 247 6 0.91989 114 6 0.6305177 122 5 0.835090 147 6 0.733947 104 6 0.780065 154 6 0.7147554 218 6 0.6304029 89 5 0.832279 102 5 0.771549 190 6 0.7165119 222 6 0.8620680 205 6 0.830926 274 6 0.3139721 224 6 0.436537 154 6 0.502674 221 6 0.6533248 200 6 0.488639 131 6 0.6551481 243 6 0.775286 270 6 0.6202576 243 6 0.673342 195 6 0.753258 247 6 0.795044 300 8 0.834476 0.7103722 0.751357 0.8017495 0.856079 0.869848 0.826492 0.851771 0.7345844 0.927756 0.911029 0.811383 0.7588499 0.851534 0.919052 0.765210 0.788480 0.829224 0.8002296 0.8142975 0.912876 0.628308 0.875483 0.8528710 0.776959 0.7768901 0.7779968 0.869158 0.761191 0.7873055 0.8608719 0.943656 0.2290916 0.328940 0.4873455 0.5986357 0.5752515 0.5214278 0.727385 0.6509803 0.6441023 0.6780857 0.7789028 5 0.830415 0.842105 -0.01125214 6 0.703132 0.835926 -0.13279424 9.7876e-01 1.7096e-01 insignificant 1.000000 1.0000000 insignificant 0.936001 0.70798641 insignificant 1 1.00000 insignificant 0.02493380 0.4622777 insignificant 1 insignificant 0.831041 0.4654731 0.3843123 6 0.684980 0.4193908 0.2655888 1.4024e-14 1.0000e+00 hypermethylated 4.5237e-13 1.00000000 hypermethylated 2.6770e-06 1.0000e+00 hypermethylated 9.2312e-05 1.000000 hypermethylated 0.2880517 1.8279e-03 weaklyHypermeth 5.0775e-02 weaklyHypermeth 0.830684 0.7266932 0.0945419 6 0.791024 0.736107 0.05491665 3.5285e-04 5.8393e-01 weaklyHypermeth 1.2602e-02 1.0000e+00 weaklyHypermeth 4.3087e-04 9.5391e-01 weaklyHypermeth 2.6929e-02 1.0000000 weaklyHypermeth 0.07299674 1.0115e-01 insignificant 1.0000000 insignificant 0.841942 0.4654731 3.9326e-01 6 0.789048 0.4193908 0.36965756 4.7855e-10 0.99999746 hypermethylated 1.4955e-08 1.000000 hypermethylated 1.1295e-04 0.99999874 hypermethylated 3.1376e-03 1.000000 hypermethylated 0.2631179 2.6429e-03 weaklyHypermeth 7.5513e-02 weaklyHypermeth 0.842650 0.7266932 0.1038054 6 0.857084 0.736107 0.12097683 1.9194e-03 9.9836e-01 weaklyHypermeth 6.0145e-02 1.00000000 weaklyHypermeth 1.7321e-02 0.99982045 weaklyHypermeth 4.9489e-01 1.000000 insignificant 4.8063e-02 2.8184e-01 insignificant 1.000000 insignificant 0.4662681 0.7246964 -0.3091345 6 0.4892892 0.698143 -0.20885359 9.9492e-01 1.3350e-03 weaklyHypometh 1.0000e+00 1.9633e-02 weaklyHypometh 9.3224e-01 2.6020e-02 weaklyHypometh 1.0000e+00 3.4693e-01 insignificant -0.2150549 8.9808e-03 weaklyHypometh 2.3073e-01 insignificant chr10 126319150 126320150 37600 ENSG00000203273 0.8614221 287 8 0.7564522 259 8 0.7457341 159 9 0.882048 382 8 0.803968 80 7 0.874808 334 8 0.8517940 155 9 0.910986 187 10 0.811921 214 6 0.945491 139 5 0.907325 302 8 0.620076 75 4 0.759005 197 5 0.910913 106 5 0.887121 138 5 0.830208 73 3 0.619048 48 5 0.772977 258 8 0.886567 95 8 0.801880 290 8 0.84069 98 8 0.4778608 173 5 0.833660 185 8 0.698836 154 9 0.813860 272 8 0.8871122 309 8 0.6848333 203 5 0.628184 161 5 0.705000 218 8 0.9263236 203 8 0.8936345 214 8 0.815631 270 8 0.7943647 241 8 0.919529 128 8 0.788077 440 7 0.3281900 306 8 0.566622 310 9 0.6177952 401 8 0.569177 362 8 0.6100682 272 8 0.603667 223 8 0.624152 221 8 0.729306 347 8 0.812722 0.7938409 0.800603 0.8721063 0.842816 0.871585 0.832082 0.882827 0.8681136 0.906012 0.877155 0.764858 0.8325394 0.903105 0.852121 0.912823 0.734978 0.728408 0.8627390 0.8688664 0.871060 0.423950 0.802145 0.8468293 0.797578 0.8610797 0.7560715 0.814318 0.762245 0.9135878 0.8480583 0.892426 0.7659680 0.944057 0.6768734 0.1783731 0.7023196 0.5793174 0.512301 0.6274525 0.5525051 0.5001568 0.6382381 5 0.849881 0.792683 0.04484307 8 0.827522 0.708626 0.11889550 5.3104e-05 8.3405e-01 weaklyHypermeth 0.026552 1.0000000 weaklyHypermeth 0.189441 0.79910835 insignificant 1 1.00000 insignificant 0.05485147 0.2172202 insignificant 1 insignificant 0.849881 0.6429354 0.1761076 8 0.827522 0.5444475 0.2830744 2.0096e-13 9.9990e-01 weaklyHypermeth 5.9105e-12 1.00000000 weaklyHypermeth 8.4085e-04 9.9800e-01 weaklyHypermeth 1.7890e-02 1.000000 weaklyHypermeth 0.1528909 1.3813e-01 insignificant 1.0000e+00 insignificant 0.851315 0.6315789 0.2378875 8 0.834945 0.620283 0.21466217 2.5953e-27 1.0000e+00 hypermethylated 6.4883e-25 1.0000e+00 hypermethylated 1.3102e-11 1.0000e+00 hypermethylated 6.5510e-09 1.0000000 hypermethylated 0.19471304 2.5959e-04 weaklyHypermeth 0.0337149 weaklyHypermeth 0.792683 0.6429354 1.6582e-01 8 0.708626 0.5444475 0.16417890 3.7982e-05 0.99752020 weaklyHypermeth 5.3496e-04 1.000000 weaklyHypermeth 1.1169e-02 0.99597799 weaklyHypermeth 1.5956e-01 1.000000 insignificant 0.0980394 3.3135e-01 insignificant 1.0000e+00 insignificant 0.796540 0.6315789 0.2075291 8 0.760652 0.620283 0.14036942 1.2947e-10 9.9997e-01 hypermethylated 2.1578e-08 1.00000000 hypermethylated 5.1976e-08 0.99999937 hypermethylated 1.0395e-05 1.000000 hypermethylated 1.3986e-01 9.0130e-03 weaklyHypermeth 0.321894 insignificant 0.6440771 0.6315789 0.0288467 8 0.5959914 0.620283 -0.02429150 1.8014e-01 7.6818e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.6958e-01 9.5789e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0418221 6.5920e-01 insignificant 1.0000e+00 insignificant chr10 126589150 126590150 37613 ENSG00000217116 0.9299840 159 5 0.7570379 235 5 0.7902625 74 5 0.701551 142 5 0.842308 55 5 0.888592 317 5 0.8511765 90 5 0.778854 84 5 0.827544 66 5 1.000000 18 3 0.787831 197 5 0.771429 25 3 0.916912 55 3 0.740606 37 3 0.939394 34 3 0.833333 38 4 NA 0 0 0.819722 116 5 0.793478 146 3 0.840227 279 5 1.00000 38 3 NA 0 0 0.927937 167 5 1.000000 34 2 0.500000 19 3 0.8358881 269 6 0.7976190 25 2 0.897179 44 3 0.846525 149 5 0.8497692 263 6 0.7819358 266 5 0.848916 227 5 0.7852951 186 4 0.826667 36 3 0.454762 131 5 1.0000000 4 0 0.526647 151 4 0.5882257 239 5 0.813406 298 5 0.8531073 191 5 0.664233 100 5 0.904941 131 5 0.861817 135 5 0.927271 0.7600055 0.807738 0.8412077 0.845238 0.935984 0.877451 0.880247 0.9290772 1.000000 0.879220 0.947279 0.8451506 0.844372 0.946970 0.891667 NA 0.841468 0.9298654 0.9281479 1.000000 NA 0.921296 1.0000000 0.523810 0.9404739 0.7704082 0.812179 0.881003 0.9172465 0.9387307 0.873522 0.8579030 0.936905 0.2200680 1.0000000 0.8789855 0.7710345 0.937411 0.9217073 0.8876340 0.8676176 0.8541667 2 0.863867 0.896736 -0.03596028 5 0.795603 0.818695 -0.02309226 9.7004e-01 2.2558e-02 weaklyHypometh 1.000000 0.7807054 insignificant 0.955794 0.09823003 insignificant 1 1.00000 insignificant -0.01204277 0.7899423 lowCoverage 1 lowCoverage 0.863867 0.7242303 0.1435020 5 0.795603 0.5712714 0.2243318 3.2483e-05 9.9985e-01 weaklyHypermeth 4.5750e-04 1.00000000 weaklyHypermeth 3.2865e-02 9.7694e-01 weaklyHypermeth 3.4595e-01 1.000000 insignificant 0.1351852 1.7472e-01 lowCoverage 1.0000e+00 lowCoverage 0.863867 0.8853801 -0.0221720 5 0.795603 0.802508 -0.00690445 9.2116e-01 3.5045e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.8528e-01 7.5585e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.01261696 7.8919e-01 lowCoverage 1.0000000 lowCoverage 0.896736 0.7242303 1.7794e-01 5 0.818695 0.5712714 0.24742407 5.8133e-06 0.99999374 weaklyHypermeth 8.8081e-05 1.000000 weaklyHypermeth 1.1205e-03 0.99645445 weaklyHypermeth 2.2867e-02 1.000000 weaklyHypermeth 0.1472280 1.5960e-01 lowCoverage 1.0000e+00 lowCoverage 0.896736 0.8853801 0.0139913 5 0.818695 0.802508 0.01618781 2.8950e-01 9.1108e-01 insignificant 1.0000e+00 1.00000000 insignificant 1.6599e-01 0.97535944 insignificant 1.0000e+00 1.000000 insignificant 2.4660e-02 6.7952e-01 lowCoverage 1.000000 lowCoverage 0.7242303 0.8853801 -0.1648476 5 0.5712714 0.802508 -0.23123626 9.9863e-01 8.0113e-03 weaklyHypometh 1.0000e+00 9.0015e-02 weaklyHypometh 9.5545e-01 7.4737e-02 insignificant 1.0000e+00 7.6263e-01 insignificant -0.1225683 2.3452e-01 lowCoverage 1.0000e+00 lowCoverage chr10 126736450 126737450 37620 CTBP2 ENSG00000175029 0.8201177 274 9 0.8140485 178 10 0.7808540 89 6 0.754192 274 9 0.697090 64 7 0.755506 360 12 0.6931301 82 7 0.738032 169 10 0.710897 84 9 0.945691 49 3 0.789077 368 12 0.552211 30 3 0.791868 93 6 0.789317 75 6 0.961818 72 6 0.790909 41 3 0.747934 235 2 0.779790 303 9 0.713309 150 9 0.735375 309 9 0.73916 79 6 0.8781056 61 3 0.692595 109 9 0.829805 84 7 0.932418 92 6 0.8039177 210 10 0.8350354 86 9 0.558516 53 3 0.886368 155 9 0.8490708 168 10 0.7574737 253 10 0.851744 293 9 0.8778451 155 9 0.788515 140 9 0.467395 90 6 0.7857143 46 2 0.749048 102 8 0.8826717 226 7 0.835018 202 9 0.7476477 276 9 0.795173 236 9 0.730000 97 6 0.731806 277 10 0.795618 0.7765175 0.762156 0.8516383 0.692517 0.784095 0.832727 0.841799 0.8419048 0.897365 0.812298 0.785660 0.8007253 0.887884 0.961558 0.758468 0.786530 0.799645 0.8628571 0.8016704 0.811111 0.805182 0.787044 0.7510262 0.916163 0.8232047 0.7654917 0.631334 0.878349 0.8160243 0.8049538 0.812730 0.8318699 0.817300 0.5487548 0.8457143 0.6589660 0.8601140 0.851993 0.8400590 0.8121244 0.8571429 0.8340475 3 0.826614 0.844187 -0.01324333 9 0.802536 0.790940 0.01159628 9.3423e-01 2.4367e-01 insignificant 1.000000 1.0000000 insignificant 0.933040 0.16159336 insignificant 1 1.00000 insignificant -0.03312558 0.3570632 insignificant 1 insignificant 0.826509 0.8129117 0.0061850 9 0.787347 0.8008300 -0.0134832 6.2826e-01 6.9970e-01 insignificant 1.0000e+00 1.00000000 insignificant 8.9128e-01 4.9912e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0095269 8.8855e-01 insignificant 1.0000e+00 insignificant 0.826509 0.8391544 -0.0229997 9 0.787347 0.802031 -0.01468432 9.8106e-01 1.9732e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8750e-01 2.8137e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.00012925 9.9642e-01 insignificant 1.0000000 insignificant 0.844607 0.8129117 2.0896e-02 9 0.813320 0.8008300 0.01249008 5.6895e-01 0.98258402 insignificant 1.0000e+00 1.000000 insignificant 8.2030e-01 0.97867308 insignificant 1.0000e+00 1.000000 insignificant 0.0426524 5.5407e-01 insignificant 1.0000e+00 insignificant 0.844607 0.8391544 -0.0113519 9 0.813320 0.802031 0.01128892 7.9238e-01 5.3885e-01 insignificant 1.0000e+00 1.00000000 insignificant 6.7954e-01 0.29355712 insignificant 1.0000e+00 1.000000 insignificant 3.3255e-02 3.6779e-01 insignificant 1.000000 insignificant 0.8129117 0.8391544 -0.0312144 9 0.8008300 0.802031 -0.00120116 9.9379e-01 1.4652e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8498e-01 2.8295e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0093976 8.9058e-01 insignificant 1.0000e+00 insignificant chr10 126762650 126763650 37622 CTBP2 ENSG00000175029 0.8337983 169 5 0.7364268 164 6 0.7251323 134 6 0.896882 172 6 0.748065 61 6 0.792614 300 6 0.8328148 111 6 0.812310 146 6 0.810084 97 6 0.874019 101 5 0.851156 226 6 0.962302 47 3 0.719141 115 6 0.729539 81 5 0.812397 119 6 0.820513 22 1 0.419048 17 3 0.588685 155 6 0.684621 203 6 0.717650 161 6 0.59683 61 5 0.8421717 70 5 0.633566 113 6 0.739145 92 5 0.924419 122 3 0.8555690 219 6 0.6996528 101 6 0.623131 59 4 0.806716 125 6 0.6553061 221 6 0.7847017 236 6 0.852285 197 6 0.5232107 165 6 0.535962 132 6 0.556463 163 6 0.7333333 44 1 0.607909 103 6 0.5541499 233 6 0.882491 227 6 0.8986014 169 6 0.954558 109 4 0.920940 169 6 0.837825 133 6 0.846116 0.7390996 0.722123 0.9141573 0.807983 0.837703 0.826004 0.810625 0.8471296 0.887122 0.865923 0.940246 0.7967643 0.847844 0.874089 0.812943 0.729421 0.847019 0.7597178 0.8760269 0.782340 0.883820 0.838267 0.8538213 0.951630 0.8768891 0.6953167 0.761977 0.887440 0.8358661 0.8482921 0.867421 0.6571757 0.695591 0.8339314 0.8190674 0.8331424 0.7751046 0.925179 0.9296710 0.9621165 0.9542832 0.8799407 3 0.812476 0.810174 -0.01617361 6 0.716246 0.647909 0.06833744 4.5195e-01 3.0998e-01 insignificant 1.000000 1.0000000 insignificant 0.601016 0.68126277 insignificant 1 1.00000 insignificant 0.01723574 0.6766707 insignificant 1 insignificant 0.812958 0.6273810 0.1334809 6 0.747139 0.4945990 0.2525398 1.5357e-11 6.3035e-01 weaklyHypermeth 4.1505e-10 1.00000000 weaklyHypermeth 3.1456e-03 9.0150e-01 weaklyHypermeth 5.4234e-02 1.000000 weaklyHypermeth 0.1831888 7.3068e-04 weaklyHypermeth 2.3570e-02 weaklyHypermeth 0.813200 0.9120198 -0.0933691 6 0.788329 0.896761 -0.10843275 9.9999e-01 7.5964e-06 weaklyHypometh 1.0000e+00 1.2661e-03 weaklyHypometh 9.9973e-01 1.9182e-05 weaklyHypometh 1.0000e+00 0.0047956 weaklyHypometh -0.13052333 7.8875e-04 weaklyHypometh 0.0621129 weaklyHypometh 0.811063 0.6273810 1.7753e-01 6 0.692848 0.4945990 0.19824944 3.5099e-09 0.89418637 weaklyHypermeth 1.0323e-07 1.000000 weaklyHypermeth 3.3460e-02 0.88553038 weaklyHypermeth 3.2804e-01 1.000000 insignificant 0.1659530 2.4419e-03 weaklyHypermeth 7.1820e-02 weaklyHypermeth 0.812578 0.9120198 -0.0894653 6 0.808323 0.896761 -0.08843822 9.9997e-01 1.8170e-04 weaklyHypometh 1.0000e+00 0.02271223 weaklyHypometh 9.9996e-01 0.00040311 weaklyHypometh 1.0000e+00 0.080622 weaklyHypometh -1.4776e-01 1.1502e-03 weaklyHypometh 0.107542 insignificant 0.6288783 0.9120198 -0.2487706 6 0.5770321 0.896761 -0.31972923 9.9962e-01 7.2496e-09 hypomethylated 1.0000e+00 3.1520e-07 hypomethylated 9.9789e-01 2.3170e-03 weaklyHypometh 1.0000e+00 5.7926e-02 weaklyHypometh -0.3137121 3.0178e-05 hypomethylated 6.9799e-03 hypomethylated chr10 126802250 126803250 37625 CTBP2 ENSG00000175029 0.8571309 227 6 0.8393542 183 7 0.7142857 62 6 0.841327 144 6 0.831169 35 1 0.910099 183 6 0.8454861 57 3 0.841126 153 7 0.880936 58 3 0.807500 34 1 0.871213 341 7 1.000000 8 0 0.985923 82 3 0.943590 51 3 0.807374 50 3 0.333333 14 1 NA 0 0 0.750137 196 6 0.836390 251 6 0.881202 131 6 0.68452 57 3 0.8333333 40 3 0.913793 52 3 0.969979 62 4 0.818047 211 6 0.9378385 265 6 0.9484524 113 3 0.604762 25 2 0.939126 300 6 0.9284751 278 7 0.8758406 243 7 0.856423 160 6 0.2247946 249 7 0.309686 118 6 0.844695 543 7 0.4349206 67 5 0.421870 250 7 0.8138184 329 7 0.525073 88 6 0.7032423 194 6 0.826640 142 6 0.949811 101 3 0.542484 110 7 0.863089 0.7262826 0.623786 0.9255895 0.724331 0.951686 0.924488 0.861665 0.7284800 0.895146 0.856320 0.997567 0.9734364 0.927259 0.839677 0.696596 NA 0.830386 0.8643189 0.9604361 0.800971 0.974110 0.924841 0.9932461 0.927261 0.9256159 0.8925566 0.542586 0.866268 0.9176383 0.9425339 0.855257 0.3512945 0.336107 0.8191527 0.7941954 0.4371092 0.9129141 0.915118 0.9137561 0.9535573 0.9437899 0.8079782 1 0.851639 0.895497 -0.04407636 6 0.864240 0.812472 0.05176797 7.0267e-01 5.5002e-03 weaklyHypometh 1.000000 0.3235382 insignificant 0.712715 0.27730179 insignificant 1 1.00000 insignificant -0.02881747 0.5315373 lowCoverage 1 lowCoverage 0.850753 0.6226658 0.2151365 6 0.739240 0.6301396 0.1091003 1.5931e-07 9.6846e-01 hypermethylated 3.3189e-06 1.00000000 hypermethylated 3.2894e-06 9.9984e-01 hypermethylated 1.0965e-04 1.000000 hypermethylated 0.3221012 2.7665e-02 lowCoverage 4.4963e-01 lowCoverage 0.851507 0.8173228 0.0217812 6 0.844846 0.686820 0.15802605 5.0067e-06 7.8621e-01 weaklyHypermeth 2.7815e-04 1.0000e+00 weaklyHypermeth 2.3394e-03 9.3221e-01 weaklyHypermeth 1.0634e-01 1.0000000 insignificant 0.12094880 2.2329e-01 lowCoverage 1.0000000 lowCoverage 0.897664 0.6230670 2.7986e-01 6 0.912472 0.6926396 0.21983231 1.5438e-07 0.99999847 hypermethylated 3.6316e-06 1.000000 hypermethylated 1.2489e-06 0.99999999 hypermethylated 5.2038e-05 1.000000 hypermethylated 0.3509187 1.9871e-02 lowCoverage 3.4261e-01 lowCoverage 0.897436 0.8173228 0.0589070 6 0.899968 0.686820 0.21314837 3.6039e-08 9.7448e-01 weaklyHypermeth 3.2763e-06 1.00000000 weaklyHypermeth 2.3899e-04 0.96633276 weaklyHypermeth 2.1726e-02 1.000000 weaklyHypermeth 1.4977e-01 1.4558e-01 lowCoverage 1.000000 lowCoverage 0.6228240 0.8173228 -0.1467456 6 0.6487310 0.686820 -0.03808855 3.9090e-01 2.0877e-02 weaklyHypometh 1.0000e+00 2.0671e-01 insignificant 9.5246e-01 5.0589e-02 insignificant 1.0000e+00 5.6842e-01 insignificant -0.2011524 1.6851e-01 insignificant 1.0000e+00 insignificant chr10 126821450 126822450 37627 CTBP2 ENSG00000175029 0.8555194 159 8 0.5997835 90 5 0.7213287 57 5 0.891809 105 5 0.962963 45 5 0.928323 136 5 0.8065476 42 5 0.769886 45 2 0.679563 38 5 0.952381 17 1 0.830952 130 7 0.619048 17 0 0.757143 44 5 0.833333 16 2 0.889931 51 5 0.800000 5 1 0.666667 6 0 0.830263 161 8 0.912946 48 5 0.694858 92 5 0.79841 28 2 0.8000000 31 3 0.783854 96 6 0.809524 33 2 0.826236 39 2 0.7443182 95 5 0.7774621 38 2 0.741667 20 1 0.776190 33 2 0.7861111 80 5 0.8281385 80 5 0.680234 130 6 0.7538919 81 5 0.697716 40 2 0.888816 53 5 0.8333333 9 0 0.681854 74 5 0.9000000 56 5 0.852350 132 5 0.8359307 113 5 0.758473 133 7 0.778274 98 5 0.785696 155 8 0.871981 0.8018759 0.745643 0.9393939 0.978836 0.918052 0.903770 0.921356 0.8987150 0.986772 0.957596 0.894180 0.8551587 0.916770 0.925838 NA 0.800396 0.953216 0.8973923 0.8347407 0.798186 0.841270 0.848280 0.8624339 0.799832 0.8895863 0.9296537 0.792989 0.971429 0.8445326 0.9121212 0.825723 0.8428106 0.897665 0.8845551 0.9683388 0.8596439 0.8956916 0.954216 0.9330035 0.9283713 0.8786848 0.8769690 1 0.859663 0.810811 0.04586556 5 0.809692 0.758538 0.05115327 4.7092e-02 9.9373e-01 weaklyHypermeth 1.000000 1.0000000 insignificant 0.439248 0.89512181 insignificant 1 1.00000 insignificant 0.02081665 0.4506688 lowCoverage 1 lowCoverage 0.859663 0.8051118 0.0594015 5 0.809692 0.7231601 0.0865314 7.7996e-03 6.2882e-01 weaklyHypermeth 7.0906e-02 1.00000000 weaklyHypermeth 5.6250e-02 4.0778e-01 insignificant 5.2084e-01 1.000000 insignificant 0.0075604 8.7258e-01 lowCoverage 1.0000e+00 lowCoverage 0.859663 0.8795563 -0.0191942 5 0.809692 0.791146 0.01854601 4.5764e-01 4.4768e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.9842e-01 6.4184e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.00198250 9.4849e-01 lowCoverage 1.0000000 lowCoverage 0.810811 0.8051118 1.8193e-02 5 0.758538 0.7231601 0.03537815 1.1220e-01 0.28319008 insignificant 7.7919e-01 1.000000 insignificant 2.2643e-01 0.54192445 insignificant 1.0000e+00 1.000000 insignificant -0.0132562 7.5530e-01 lowCoverage 1.0000e+00 lowCoverage 0.810811 0.8795563 -0.0682263 5 0.758538 0.791146 -0.03260726 9.2855e-01 6.5951e-02 insignificant 1.0000e+00 1.00000000 insignificant 8.9548e-01 0.37323848 insignificant 1.0000e+00 1.000000 insignificant -2.2799e-02 3.2114e-01 lowCoverage 1.000000 lowCoverage 0.8051118 0.8795563 -0.0876920 5 0.7231601 0.791146 -0.06798541 9.4064e-01 6.6072e-02 insignificant 1.0000e+00 5.5523e-01 insignificant 7.2439e-01 1.4871e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0095429 8.2978e-01 lowCoverage 1.0000e+00 lowCoverage chr10 126909850 126910850 37630 ENSG00000212946 0.8857991 279 7 0.8076317 308 8 0.5293899 146 8 0.773560 247 7 0.812756 77 5 0.865422 300 7 0.7437500 116 7 0.751207 144 8 0.651493 82 7 0.736240 49 4 0.881369 274 8 0.911458 31 4 0.606293 42 3 0.889103 40 4 0.639773 46 6 0.638889 26 2 NA 0 0 0.344025 366 6 0.672112 154 6 0.871155 214 7 0.79464 57 4 0.4494485 46 3 0.895283 122 7 0.561717 77 4 0.618049 268 6 0.7969682 268 8 0.8100359 70 6 0.671429 38 3 0.783183 208 6 0.8181166 260 8 0.8194852 282 8 0.890044 269 7 0.4402033 160 8 0.384181 123 6 0.061632 221 8 0.0000000 359 5 0.324375 248 8 0.1911503 347 7 0.800055 294 6 0.6107896 211 6 0.663485 270 6 0.386285 233 3 0.654890 219 7 0.873896 0.7392805 0.549752 0.8057862 0.783143 0.851942 0.755478 0.791858 0.7074898 0.768807 0.882736 0.820513 0.6658342 0.773140 0.670820 0.656566 NA 0.347049 0.6717956 0.8568477 0.762488 0.502262 0.870541 0.6254535 0.644252 0.7513464 0.7503509 0.784615 0.782878 0.8188584 0.7834238 0.888803 0.4191636 0.468208 0.1406371 0.2137524 0.4082693 0.2472047 0.796911 0.6556819 0.6621631 0.5739747 0.6697747 3 0.743625 0.773537 -0.03711877 6 0.745302 0.779546 -0.03424413 9.8358e-01 2.1943e-01 insignificant 1.000000 1.0000000 insignificant 0.797138 0.56520641 insignificant 1 1.00000 insignificant -0.00492334 0.9254160 insignificant 1 insignificant 0.743625 0.2352538 0.4419793 7 0.745302 0.2283616 0.5169406 5.1754e-30 1.0000e+00 hypermethylated 3.9811e-28 1.00000000 hypermethylated 1.1165e-13 1.0000e+00 hypermethylated 1.2406e-11 1.000000 hypermethylated 0.5038532 3.5577e-04 hypermethylated 1.4824e-02 hypermethylated 0.743625 0.6862266 0.0691099 6 0.745302 0.657641 0.08766163 7.7015e-03 9.7686e-01 weaklyHypermeth 2.0841e-01 1.0000e+00 insignificant 9.6694e-03 9.8158e-01 weaklyHypermeth 3.1192e-01 1.0000000 insignificant 0.11434251 1.7744e-01 insignificant 1.0000000 insignificant 0.773537 0.2352538 4.9864e-01 6 0.779546 0.2283616 0.55118477 4.6223e-35 1.00000000 hypermethylated 5.1359e-33 1.000000 hypermethylated 1.2005e-11 1.00000000 hypermethylated 1.2005e-09 1.000000 hypermethylated 0.5087765 2.7001e-04 hypermethylated 1.1739e-02 hypermethylated 0.773537 0.6862266 0.1085427 6 0.779546 0.657641 0.12190576 1.8562e-05 9.9903e-01 weaklyHypermeth 9.7695e-04 1.00000000 weaklyHypermeth 4.9581e-03 0.99715827 weaklyHypermeth 2.0659e-01 1.000000 insignificant 1.1927e-01 1.7026e-01 insignificant 1.000000 insignificant 0.2352538 0.6862266 -0.4100506 6 0.2283616 0.657641 -0.42927901 1.0000e+00 5.8262e-18 hypomethylated 1.0000e+00 6.4735e-16 hypomethylated 1.0000e+00 3.7246e-07 hypomethylated 1.0000e+00 3.7246e-05 hypomethylated -0.3895106 3.4682e-03 weaklyHypometh 1.3733e-01 insignificant chr10 128029150 128030150 37656 ENSG00000213170 0.8406767 316 8 0.8873861 356 8 0.7102915 214 8 0.918879 283 8 0.786827 145 8 0.751646 478 8 0.8586012 108 8 0.853909 253 8 0.696621 155 8 0.901029 202 8 0.850520 249 8 0.724843 70 7 0.937473 307 7 0.923614 194 7 0.892553 268 8 0.753968 32 4 0.750000 16 2 0.771761 481 8 0.777658 330 8 0.771545 295 8 0.85000 59 5 0.8317276 138 7 0.946428 165 8 0.893895 67 6 0.792186 186 8 0.8078758 378 8 0.7961986 246 8 0.979167 68 6 0.870331 266 8 0.8741290 452 8 0.9697217 317 8 0.911902 286 8 0.5289478 245 8 0.492321 179 8 0.728323 251 6 0.5372571 100 7 0.580256 222 8 0.4371793 392 8 0.834616 355 8 0.8959977 262 8 0.840498 326 8 0.783186 301 8 0.925914 277 8 0.881291 0.8796614 0.729705 0.9186745 0.822208 0.811301 0.847282 0.877707 0.7505676 0.897966 0.850615 0.746536 0.9364149 0.924538 0.894333 0.800255 0.845574 0.774479 0.8180577 0.8312379 0.880787 0.857298 0.931432 0.8902620 0.853123 0.8677365 0.8299727 0.982639 0.906023 0.9127361 0.9694318 0.906625 0.5597846 0.535268 0.5874411 0.5813177 0.6395949 0.4722992 0.876507 0.9061796 0.8458243 0.8319196 0.9377952 6 0.827652 0.877473 -0.04885769 8 0.824112 0.871432 -0.04732000 9.9990e-01 9.3056e-06 weaklyHypometh 1.000000 0.0031019 weaklyHypometh 0.999741 0.00110401 weaklyHypometh 1 0.22796 insignificant -0.05897346 0.0287062 weaklyHypometh 1 insignificant 0.827652 0.5471562 0.3020636 8 0.824112 0.5065799 0.3175317 9.6053e-26 9.4090e-01 hypermethylated 5.3363e-24 1.00000000 hypermethylated 5.1990e-08 6.9027e-01 hypermethylated 2.6350e-06 1.000000 hypermethylated 0.2672758 5.3687e-04 hypermethylated 1.9884e-02 hypermethylated 0.827652 0.8849441 -0.0394151 8 0.824112 0.862610 -0.03849807 9.9777e-01 7.4460e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.5302e-01 3.3616e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.03805224 2.4388e-01 insignificant 1.0000000 insignificant 0.877473 0.5471562 3.5080e-01 8 0.871432 0.5065799 0.36485166 1.6810e-28 0.99999398 hypermethylated 1.2007e-26 1.000000 hypermethylated 1.1777e-08 0.98917903 hypermethylated 9.0596e-07 1.000000 hypermethylated 0.3262492 1.3963e-04 hypermethylated 6.6490e-03 hypermethylated 0.877473 0.8849441 0.0095355 8 0.871432 0.862610 0.00882193 1.8720e-01 9.3343e-01 insignificant 1.0000e+00 1.00000000 insignificant 1.9065e-01 0.98040477 insignificant 1.0000e+00 1.000000 insignificant 2.0921e-02 5.2070e-01 insignificant 1.000000 insignificant 0.5471562 0.8849441 -0.3344493 8 0.5065799 0.862610 -0.35602974 9.9683e-01 9.8080e-16 hypomethylated 1.0000e+00 7.5446e-14 hypomethylated 9.2497e-01 3.0366e-05 hypomethylated 1.0000e+00 1.8979e-03 hypomethylated -0.3053280 2.0043e-04 hypomethylated 1.4453e-02 hypomethylated chr10 134109750 134110750 37696 C10orf91 ENSG00000180066 0.7347854 285 12 0.5446865 229 12 0.6423694 205 12 0.740402 170 10 0.631217 133 9 0.747803 344 12 0.5517443 148 7 0.664179 223 10 0.484264 151 10 0.802796 189 10 0.844198 286 10 0.630822 110 7 0.722245 300 12 0.758624 116 6 0.730191 196 9 0.531111 53 4 0.684127 45 3 0.546542 456 11 0.773183 333 10 0.648419 275 10 0.66725 131 10 0.6109717 181 8 0.682116 173 9 0.560897 129 8 0.733522 246 8 0.7047606 323 12 0.7264671 215 12 0.512807 69 5 0.791493 352 10 0.7978574 379 10 0.8590779 310 10 0.837071 315 10 0.8290221 194 9 0.662750 277 10 0.774935 155 8 0.7906987 77 6 0.645123 266 11 0.6618976 342 10 0.769205 215 9 0.7671517 286 10 0.682959 223 10 0.669808 229 10 0.557723 199 8 0.744529 0.6581454 0.614195 0.7823204 0.592002 0.651093 0.610994 0.685014 0.6627750 0.786122 0.805066 0.681994 0.6486855 0.677745 0.734174 0.493853 0.617018 0.682806 0.7976272 0.6775585 0.739570 0.557304 0.783367 0.7135681 0.716570 0.8226555 0.8027980 0.641526 0.782407 0.8037815 0.8046837 0.781312 0.8132680 0.634135 0.7924367 0.6961224 0.7594148 0.7752487 0.769703 0.7465288 0.6965780 0.6731565 0.5941060 6 0.714319 0.768876 -0.06046899 10 0.648624 0.698173 -0.04954900 9.9924e-01 2.7131e-03 weaklyHypometh 1.000000 0.2260945 insignificant 0.999878 0.01203281 weaklyHypometh 1 0.75284 insignificant -0.03633885 0.3527870 insignificant 1 insignificant 0.714319 0.7238749 -0.0361990 10 0.653971 0.6398337 0.0141373 4.0146e-01 4.0021e-03 weaklyHypometh 1.0000e+00 0.36383062 insignificant 8.3702e-01 3.8887e-03 weaklyHypometh 1.0000e+00 0.445203 insignificant -0.0567189 1.8133e-01 insignificant 1.0000e+00 insignificant 0.714589 0.6493056 0.0073733 9 0.679368 0.683379 -0.00401134 3.8634e-01 2.9148e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.7408e-01 3.3993e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.01868388 6.8959e-01 insignificant 1.0000000 insignificant 0.770164 0.7238749 3.3965e-02 10 0.733241 0.6398337 0.09340733 2.2709e-01 0.24826345 insignificant 1.0000e+00 1.000000 insignificant 7.2904e-01 0.22378985 insignificant 1.0000e+00 1.000000 insignificant -0.0203800 6.5783e-01 insignificant 1.0000e+00 insignificant 0.769477 0.6493056 0.0704224 9 0.706574 0.683379 0.02319518 1.7665e-02 7.8781e-01 weaklyHypermeth 3.3046e-01 1.00000000 insignificant 1.5511e-01 0.74532308 insignificant 1.0000e+00 1.000000 insignificant 1.7655e-02 7.3035e-01 insignificant 1.000000 insignificant 0.7242170 0.6486486 0.0434325 9 0.6498218 0.675049 -0.02522731 4.0940e-02 8.6355e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 1.1955e-01 9.7254e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0380350 4.7379e-01 insignificant 1.0000e+00 insignificant chr10 134110550 134111550 37697 C10orf91 ENSG00000180066 0.7007099 346 8 0.3777530 83 8 0.5585664 92 8 0.738744 211 8 0.805060 60 8 0.754419 270 8 0.5267677 60 8 0.560081 135 8 0.694111 73 8 0.759341 110 8 0.704347 128 8 0.727273 44 3 0.609627 153 8 0.466184 99 7 0.700142 113 8 0.593750 26 0 0.000000 4 0 0.473258 886 8 0.755636 162 8 0.773641 173 8 0.34877 62 8 0.6800119 247 8 0.695139 139 8 0.778274 68 8 0.746141 349 8 0.8331642 165 8 0.8161132 163 8 0.550926 29 1 0.868246 161 8 0.6957875 121 8 0.7504289 174 8 0.664341 185 8 0.7538314 133 8 0.617188 351 8 0.921296 42 3 0.5415514 355 7 0.514198 118 8 0.5071499 254 8 0.787722 200 8 0.7224129 181 8 0.589907 247 8 0.605588 341 8 0.714521 169 8 0.691462 0.3907647 0.524368 0.7312972 0.750911 0.655957 0.508967 0.538429 0.6638131 0.825213 0.707195 0.679654 0.5968831 0.499413 0.684514 0.488520 0.461762 0.479615 0.7600671 0.7383127 0.407343 0.612180 0.698384 0.7458090 0.702642 0.8196313 0.8001208 0.523384 0.819253 0.7116786 0.7324155 0.730687 0.7622879 0.611444 0.7177825 0.5667480 0.6014869 0.5480726 0.760391 0.7026144 0.5745523 0.5777913 0.6861478 3 0.620155 0.739365 -0.11708650 8 0.608066 0.764499 -0.15643239 9.9999e-01 5.0478e-06 weaklyHypometh 1.000000 0.0025239 weaklyHypometh 0.993637 0.01170698 weaklyHypometh 1 0.75284 insignificant -0.08830840 0.1415098 insignificant 1 insignificant 0.620155 0.5554669 0.0449801 8 0.608066 0.5298886 0.0781778 4.5061e-02 1.4271e-01 weaklyHypermeth 3.3379e-01 1.00000000 insignificant 1.6301e-02 2.1992e-01 weaklyHypermeth 2.0627e-01 1.000000 insignificant -0.0285654 7.2669e-01 insignificant 1.0000e+00 insignificant 0.620230 0.6687170 -0.0508199 8 0.621575 0.669395 -0.04782078 6.1276e-01 8.8650e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 5.9526e-01 3.7207e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.07005981 2.3214e-01 insignificant 1.0000000 insignificant 0.739365 0.5554669 1.6274e-01 8 0.764499 0.5298886 0.23461017 1.3399e-06 0.56306831 weaklyHypermeth 2.3927e-05 1.000000 weaklyHypermeth 1.4508e-02 0.67082721 weaklyHypermeth 1.9605e-01 1.000000 insignificant 0.0597430 4.6694e-01 insignificant 1.0000e+00 insignificant 0.739084 0.6687170 0.0666041 8 0.735061 0.669395 0.06566565 1.4824e-02 9.4189e-01 weaklyHypermeth 2.9648e-01 1.00000000 insignificant 3.9862e-02 0.73714426 weaklyHypermeth 7.8626e-01 1.000000 insignificant 1.8249e-02 7.4677e-01 insignificant 1.000000 insignificant 0.5559105 0.6687170 -0.1191795 8 0.5961246 0.669395 -0.07327079 1.5045e-01 1.4006e-03 weaklyHypometh 1.0000e+00 2.0299e-02 weaklyHypometh 2.7650e-01 8.9377e-03 weaklyHypometh 1.0000e+00 1.5680e-01 insignificant -0.0414944 6.0536e-01 insignificant 1.0000e+00 insignificant chr10 134180150 134181150 37699 C10orf91 ENSG00000180066 0.2645869 646 17 0.2950146 501 13 0.3050063 651 23 0.238714 429 15 0.145207 700 24 0.239969 1188 23 0.2053110 872 23 0.305718 493 16 0.180720 731 23 0.242857 776 23 0.299766 592 20 0.293010 636 20 0.233532 613 22 0.146527 119 13 0.224116 595 20 0.330619 262 10 0.263667 498 14 0.259351 1858 19 0.209077 536 19 0.192270 723 23 0.30039 229 19 0.2928608 306 13 0.308696 446 16 0.153064 356 22 0.163576 1060 19 0.1753265 1089 23 0.2515464 290 16 0.177794 163 13 0.294885 588 19 0.1735389 933 23 0.2717416 709 19 0.459869 596 19 0.2029989 606 19 0.261219 734 23 0.503836 376 16 0.1766128 650 15 0.232928 344 23 0.3165688 797 19 0.376555 665 18 0.3172606 689 17 0.289697 660 19 0.212845 1475 21 0.325783 981 19 0.169939 0.1298415 0.233482 0.1458649 0.087464 0.165532 0.125671 0.155469 0.1220113 0.167464 0.301810 0.192716 0.1248948 0.139422 0.120225 0.269095 0.173543 0.107459 0.0955177 0.1135771 0.208714 0.124259 0.164705 0.1505209 0.095139 0.0881075 0.2092961 0.113953 0.165925 0.0961560 0.1366194 0.303951 0.0611021 0.114517 0.2796380 0.0624207 0.1253623 0.0834457 0.133722 0.1324880 0.1216576 0.1084698 0.1324103 7 0.268222 0.202513 0.01404356 23 0.235375 0.223165 0.01221042 6.6383e-03 9.9748e-01 weaklyHypermeth 1.000000 1.0000000 insignificant 0.040749 0.99565013 weaklyHypermeth 1 1.00000 insignificant -0.00818891 0.7767447 insignificant 1 insignificant 0.268262 0.2313177 0.0227119 23 0.244428 0.2220831 0.0223452 1.2226e-07 1.7894e-01 weaklyHypermeth 2.6013e-06 1.00000000 weaklyHypermeth 1.5083e-07 8.4355e-01 weaklyHypermeth 6.5579e-06 1.000000 weaklyHypermeth -0.0386088 4.7074e-01 insignificant 1.0000e+00 insignificant 0.268262 0.2042506 -0.0141537 21 0.244428 0.288117 -0.04368828 4.9325e-02 1.0826e-06 weaklyHypometh 8.6535e-01 2.7064e-04 weaklyHypometh 1.6733e-01 1.6677e-03 weaklyHypometh 1.0000e+00 0.1853012 insignificant -0.06067645 8.7031e-02 insignificant 1.0000000 insignificant 0.202543 0.2313177 7.6440e-03 23 0.231748 0.2220831 0.00966511 4.8699e-04 0.59739108 weaklyHypermeth 5.7974e-03 1.000000 weaklyHypermeth 6.2639e-04 0.92397896 weaklyHypermeth 1.4236e-02 1.000000 weaklyHypermeth -0.0304199 5.9503e-01 insignificant 1.0000e+00 insignificant 0.202543 0.2042506 -0.0059170 21 0.231748 0.288117 -0.05636834 4.4940e-01 2.0035e-07 weaklyHypometh 1.0000e+00 0.00010018 weaklyHypometh 7.9708e-01 0.00095908 weaklyHypometh 1.0000e+00 0.159846 insignificant -5.2488e-02 1.8563e-01 insignificant 1.000000 insignificant 0.2313177 0.2042506 -0.0277461 21 0.2220831 0.288117 -0.06603345 9.2848e-01 7.1223e-07 weaklyHypometh 1.0000e+00 2.4560e-05 weaklyHypometh 9.9985e-01 6.7548e-05 weaklyHypometh 1.0000e+00 3.7527e-03 weaklyHypometh -0.0220677 7.0153e-01 insignificant 1.0000e+00 insignificant chr10 134180850 134181850 37700 C10orf91 ENSG00000180066 0.0701778 382 9 0.0524506 343 9 0.0995100 243 8 0.081174 191 9 0.025525 191 9 0.089750 424 9 0.0632796 335 9 0.085551 290 9 0.057943 379 9 0.066967 286 8 0.198314 304 9 0.099851 181 5 0.101606 266 8 0.050000 20 4 0.026962 194 5 0.170766 118 5 0.136406 264 5 0.037817 231 8 0.012550 276 8 0.055391 370 9 0.10457 115 9 0.0258773 121 5 0.091084 320 9 0.086736 218 8 0.104983 289 8 0.0249387 433 9 0.0857994 192 8 0.050794 113 9 0.107350 346 9 0.0308103 432 9 0.0496738 418 9 0.212293 447 9 0.0141834 314 9 0.000000 248 8 0.500000 79 2 0.0083333 263 8 0.049383 149 9 0.0020576 441 9 0.051163 421 9 0.0138791 433 9 0.010721 264 9 0.012026 455 8 0.044722 325 9 0.097009 0.0709632 0.164235 0.0988537 0.044276 0.106291 0.068671 0.078384 0.0709291 0.082938 0.261636 0.137009 0.0833371 0.112257 0.034483 0.205735 0.097729 0.040131 0.0144395 0.0448073 0.146817 0.026277 0.107566 0.1047283 0.047666 0.0323052 0.1498161 0.048174 0.129043 0.0369537 0.0647050 0.254510 0.0192874 0.000000 0.3224868 0.0074738 0.0275109 0.0037784 0.040695 0.0193373 0.0133912 0.0139283 0.0538005 5 0.087762 0.091463 -0.00830971 9 0.069437 0.075136 -0.00569901 7.8518e-01 5.8857e-01 insignificant 1.000000 1.0000000 insignificant 0.773640 0.68157481 insignificant 1 1.00000 insignificant -0.00214314 0.9081290 insignificant 1 insignificant 0.087796 0.0261044 0.0532665 9 0.077153 0.0218425 0.0553101 5.4610e-07 9.9216e-01 weaklyHypermeth 1.0922e-05 1.00000000 weaklyHypermeth 8.2674e-09 9.9955e-01 weaklyHypermeth 4.8631e-07 1.000000 weaklyHypermeth -0.0165600 8.4745e-01 insignificant 1.0000e+00 insignificant 0.087796 0.0305585 0.0565980 9 0.077153 0.028061 0.04909160 6.6331e-05 9.9930e-01 weaklyHypermeth 2.8840e-03 1.0000e+00 weaklyHypermeth 1.5592e-04 9.9966e-01 weaklyHypermeth 1.1137e-02 1.0000000 weaklyHypermeth 0.05259734 1.4179e-03 weaklyHypermeth 0.0886206 weaklyHypermeth 0.091490 0.0261044 5.7199e-02 9 0.083485 0.0218425 0.06164232 2.1884e-05 0.99979238 weaklyHypermeth 3.1264e-04 1.000000 weaklyHypermeth 7.1329e-07 0.99999922 weaklyHypermeth 3.2422e-05 1.000000 weaklyHypermeth -0.0144168 8.6783e-01 insignificant 1.0000e+00 insignificant 0.091490 0.0305585 0.0615228 9 0.083485 0.028061 0.05542384 1.1654e-03 9.8009e-01 weaklyHypermeth 4.0958e-02 1.00000000 weaklyHypermeth 2.7262e-03 0.99660688 weaklyHypermeth 1.2392e-01 1.000000 insignificant 5.4740e-02 6.7358e-03 weaklyHypermeth 0.287732 insignificant 0.0261044 0.0305585 -0.0046002 9 0.0218425 0.028061 -0.00621848 9.3968e-01 2.5031e-03 weaklyHypometh 1.0000e+00 3.3375e-02 weaklyHypometh 9.8469e-01 1.0092e-02 weaklyHypometh 1.0000e+00 1.7144e-01 insignificant 0.0691573 4.3496e-01 insignificant 1.0000e+00 insignificant chr10 134291150 134292150 37710 INPP5A ENSG00000068383 0.7138251 150 5 0.5669582 172 6 0.6161884 129 7 0.764633 134 4 0.546791 83 6 0.525715 281 7 0.7490150 130 8 0.670066 151 7 0.771577 91 5 0.612214 59 4 0.676386 198 6 0.607143 36 1 0.569866 117 5 0.687287 94 4 0.640713 130 7 0.625000 27 1 NA 0 0 0.426220 156 4 0.508855 192 5 0.609060 180 5 0.60452 90 5 0.3407268 51 3 0.410836 126 6 0.526797 51 4 0.632275 53 4 0.5602501 204 5 0.4307645 155 5 0.545238 53 4 0.650001 181 5 0.3913871 222 5 0.3731433 195 6 0.941111 165 4 0.1364575 206 7 0.259503 121 4 0.280352 133 4 0.3000000 16 0 0.223063 173 6 0.1882581 283 5 0.608150 194 7 0.4492133 139 5 0.457193 104 4 0.285534 109 4 0.634618 134 4 0.783689 0.6276034 0.785543 0.8006205 0.812032 0.781568 0.764099 0.751657 0.8739177 0.809662 0.821774 0.599351 0.5608070 0.803651 0.664005 0.558274 NA 0.683924 0.6608456 0.7453858 0.745065 0.637624 0.720363 0.7872727 0.851732 0.7032015 0.7719596 0.664848 0.723151 0.5994224 0.6556875 0.915919 0.3912077 0.513557 0.2211223 0.5090909 0.4142444 0.3260883 0.684665 0.5709981 0.6249070 0.5690490 0.6099014 1 0.703866 0.651525 0.02870030 5 0.560308 0.440032 0.12027611 2.4983e-01 7.6973e-01 insignificant 1.000000 1.0000000 insignificant 0.480722 0.90947982 insignificant 1 1.00000 insignificant 0.09173737 0.0997881 lowCoverage 1 lowCoverage 0.704118 0.2451613 0.4305239 5 0.500385 0.1628737 0.3375117 1.6384e-27 1.0000e+00 hypermethylated 1.0240e-25 1.00000000 hypermethylated 5.5336e-08 1.0000e+00 hypermethylated 2.6350e-06 1.000000 hypermethylated 0.3943864 2.5264e-08 lowCoverage 2.8071e-06 lowCoverage 0.705529 0.6235294 0.1235794 4 0.600463 0.466390 0.13407249 4.5360e-04 9.9399e-01 lowCoverage 1.5641e-02 1.0000e+00 lowCoverage 6.7437e-04 9.9999e-01 lowCoverage 3.3719e-02 1.0000000 lowCoverage 0.13871684 9.1863e-02 lowCoverage 1.0000000 lowCoverage 0.654925 0.2446352 4.2554e-01 5 0.546191 0.1503450 0.39584606 1.1380e-17 0.98249606 hypermethylated 5.9897e-16 1.000000 hypermethylated 9.8914e-07 0.99998565 hypermethylated 4.3006e-05 1.000000 hypermethylated 0.3026490 4.7860e-05 lowCoverage 2.5190e-03 lowCoverage 0.658986 0.6235294 0.0991193 4 0.576715 0.466390 0.11032499 3.2329e-03 9.8955e-01 lowCoverage 8.5076e-02 1.00000000 lowCoverage 1.1168e-02 0.99992832 lowCoverage 4.1364e-01 1.000000 lowCoverage 4.6979e-02 5.6782e-01 lowCoverage 1.000000 lowCoverage 0.2456897 0.6235294 -0.2831383 4 0.1954485 0.466390 -0.27094155 7.4547e-01 3.7188e-15 lowCoverage 1.0000e+00 2.6563e-13 lowCoverage 9.7585e-01 1.2206e-03 lowCoverage 1.0000e+00 3.6309e-02 lowCoverage -0.2556696 1.1842e-02 lowCoverage 2.5883e-01 lowCoverage chr10 134348350 134349350 37712 INPP5A ENSG00000068383 0.8006640 310 7 0.6423965 305 7 0.7514199 218 7 0.749201 242 6 0.742889 129 7 0.769082 308 7 0.7224941 191 6 0.799718 232 7 0.680425 199 6 0.835699 150 7 0.752297 429 7 0.872014 108 6 0.293426 292 7 0.860053 107 3 0.699289 270 7 0.953704 26 2 0.435374 51 4 0.439605 281 6 0.738606 464 7 0.579252 268 7 0.78032 137 6 0.2798794 145 6 0.729509 222 7 0.796455 113 7 0.806385 70 6 0.6377078 442 7 0.6806162 181 7 0.797005 109 5 0.792875 276 7 0.5844391 419 7 0.6567853 332 7 0.931897 382 7 0.8576147 261 7 0.667198 198 7 1.000000 78 2 0.8673469 31 3 0.765185 202 7 0.6334542 336 7 0.306555 337 7 0.4693144 321 7 0.392161 251 7 0.412045 232 7 0.243107 230 7 0.810585 0.6074033 0.699989 0.7657379 0.762151 0.735649 0.838232 0.770696 0.8216869 0.821337 0.863983 0.879795 0.2586072 0.814602 0.682162 0.937141 0.549442 0.580880 0.6632423 0.7471952 0.736080 0.314454 0.860311 0.7515376 0.815650 0.6520707 0.6554684 0.874670 0.740439 0.4958966 0.6405693 0.927178 0.8026665 0.695745 0.8043929 0.7965292 0.8378044 0.8367789 0.314296 0.4902077 0.4314856 0.4589892 0.3300101 4 0.713537 0.694484 0.01990532 7 0.663757 0.732745 -0.06898777 6.9489e-01 5.0824e-01 insignificant 1.000000 1.0000000 insignificant 0.648554 0.65212140 insignificant 1 1.00000 insignificant -0.00027602 0.9963386 insignificant 1 insignificant 0.713537 0.8001808 -0.0829171 7 0.663757 0.6758369 -0.0120794 6.8193e-01 7.0323e-05 weaklyHypometh 1.0000e+00 0.01406458 weaklyHypometh 6.5226e-01 3.4479e-05 weaklyHypometh 1.0000e+00 0.011493 weaklyHypometh -0.0925859 1.9667e-01 insignificant 1.0000e+00 insignificant 0.713568 0.4223195 0.3151468 7 0.663394 0.329672 0.33372136 1.0125e-18 1.0000e+00 hypermethylated 1.6875e-16 1.0000e+00 hypermethylated 9.5816e-12 1.0000e+00 hypermethylated 6.5510e-09 1.0000000 hypermethylated 0.34124412 4.5415e-05 hypermethylated 0.0113537 hypermethylated 0.694484 0.8001808 -1.0255e-01 7 0.732745 0.6758369 0.05690838 8.3434e-01 0.00019651 weaklyHypometh 1.0000e+00 0.051095 weaklyHypometh 5.2135e-01 0.00022022 weaklyHypometh 1.0000e+00 0.073408 weaklyHypometh -0.0923099 2.3252e-01 insignificant 1.0000e+00 insignificant 0.694159 0.4223195 0.2939027 7 0.699338 0.329672 0.36966594 2.1980e-13 1.0000e+00 hypermethylated 4.3960e-11 1.00000000 hypermethylated 1.4216e-08 1.00000000 hypermethylated 4.7388e-06 1.000000 hypermethylated 3.4152e-01 8.9315e-05 hypermethylated 0.078638 hypermethylated 0.8016304 0.4223195 0.4085972 7 0.7603165 0.329672 0.43064402 2.8817e-20 1.0000e+00 hypermethylated 2.8817e-17 1.0000e+00 hypermethylated 9.3792e-09 1.0000e+00 hypermethylated 9.3792e-06 1.0000e+00 hypermethylated 0.4338300 1.7249e-04 hypermethylated 1.4453e-02 hypermethylated chr10 134941459 134942459 37715 ADAM8 ENSG00000151651 0.6764706 74 2 0.7200165 70 6 0.7361111 51 3 0.904229 77 1 0.850529 59 6 0.935714 106 2 0.8006148 61 6 0.748898 86 5 0.761371 129 5 0.899660 62 5 0.910611 138 6 0.697059 39 4 0.891667 42 3 0.771062 46 2 0.709273 27 2 0.885714 23 3 1.000000 1 0 0.479699 102 2 0.855899 58 2 0.976356 87 2 0.88035 86 2 0.6626984 25 2 0.865901 103 5 0.838889 46 5 0.725806 62 1 0.8933223 108 5 0.8392094 77 3 1.000000 32 2 0.867521 91 2 0.9302386 180 6 0.8438842 118 6 0.945701 108 3 0.6335497 107 5 0.665199 76 4 0.984127 47 3 0.5000000 9 1 0.690192 125 5 0.4332923 151 5 0.462032 75 2 0.5277139 83 5 0.307018 60 1 0.559044 236 2 0.575956 70 2 0.792220 0.8455255 0.586022 0.9382122 0.734767 0.884864 0.680734 0.772942 0.7127328 0.764337 0.886953 0.323846 0.8620968 0.784355 0.746382 0.526882 0.960754 0.606937 0.8806389 0.9235364 0.842544 0.628862 0.851229 0.6688172 0.748432 0.7997486 0.8351944 1.000000 0.763073 0.8641750 0.8637993 0.852382 0.4352696 0.880165 0.9605735 0.8279570 0.5627695 0.7452725 0.583175 0.5615705 0.5083946 0.6352055 0.6805570 1 0.818862 0.840734 -0.01464527 2 0.792651 0.910727 -0.11807653 9.7912e-01 8.8762e-01 lowCoverage 1.000000 1.0000000 lowCoverage 0.995363 0.82473752 lowCoverage 1 1.00000 lowCoverage -0.04724563 0.2273487 lowCoverage 1 lowCoverage 0.819476 0.6427184 0.1450701 2 0.891732 0.5801363 0.3115957 6.4777e-07 9.9905e-01 lowCoverage 1.2701e-05 1.00000000 lowCoverage 5.6923e-03 9.8802e-01 lowCoverage 9.0354e-02 1.000000 lowCoverage 0.1594877 1.0042e-01 lowCoverage 1.0000e+00 lowCoverage 0.819476 0.5648855 0.2118175 2 0.891732 0.573268 0.31846375 1.3024e-04 9.9986e-01 lowCoverage 5.4265e-03 1.0000e+00 lowCoverage 5.4329e-03 9.9914e-01 lowCoverage 1.9403e-01 1.0000000 lowCoverage 0.32419495 7.4042e-04 lowCoverage 0.0621129 lowCoverage 0.840580 0.6427184 2.0280e-01 5 0.899568 0.5801363 0.31943179 4.7083e-07 0.99556688 hypermethylated 9.2319e-06 1.000000 hypermethylated 1.6848e-03 0.99621262 weaklyHypermeth 3.3036e-02 1.000000 weaklyHypermeth 0.2067334 4.5059e-02 lowCoverage 6.1249e-01 lowCoverage 0.840580 0.5648855 0.2510398 2 0.899568 0.573268 0.32629984 2.2616e-07 9.9953e-01 lowCoverage 1.6154e-05 1.00000000 lowCoverage 1.1989e-03 0.99985625 lowCoverage 7.0522e-02 1.000000 lowCoverage 3.7144e-01 3.9574e-04 lowCoverage 0.087718 lowCoverage 0.6427184 0.5648855 0.0871728 2 0.5801363 0.573268 0.00686806 6.4180e-01 8.5080e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.9865e-01 9.7993e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.1647072 1.1119e-01 lowCoverage 1.0000e+00 lowCoverage chr10 135023459 135024459 37718 C10orf125 ENSG00000148803 0.9495157 250 6 0.9141871 95 9 0.7905882 134 9 0.908171 207 9 0.846959 116 9 0.962225 345 6 0.8923653 146 9 0.915375 153 9 0.881364 107 6 0.837844 97 6 0.939247 299 9 0.811111 62 6 0.944048 145 8 0.964530 105 6 0.963569 152 6 1.000000 40 3 NA 0 0 0.948904 420 6 0.922607 151 6 0.959207 163 6 0.64967 50 4 0.8875000 70 6 0.868737 109 6 0.678283 92 7 0.935244 226 6 0.9517502 211 9 0.7422924 123 6 0.945578 112 6 0.848032 104 6 0.8605979 164 9 0.9529304 131 6 0.951470 267 6 0.9938272 97 6 1.000000 107 4 1.000000 180 5 0.8648649 91 2 0.839532 129 9 0.9491018 169 9 0.964103 180 6 0.9725783 175 9 0.914110 229 9 0.894074 83 6 0.952837 202 9 0.911037 0.8540259 0.794294 0.9013356 0.904343 0.927733 0.819015 0.900554 0.9679879 0.912697 0.923943 0.789415 0.9100203 0.920725 0.934143 1.000000 NA 0.909150 0.8810957 0.9372765 0.783425 0.966825 0.930117 0.8715496 0.933357 0.9267349 0.7987258 0.945328 0.968393 0.9099341 0.9093355 0.930265 0.9913112 1.000000 0.9957536 0.9011784 0.9893365 0.9530105 0.940034 0.9713209 0.9009186 0.8396630 0.9438604 6 0.915908 0.922845 -0.00885156 6 0.882345 0.763295 0.11905008 9.7853e-01 1.3445e-01 insignificant 1.000000 1.0000000 insignificant 0.621680 0.29975249 insignificant 1 1.00000 insignificant 0.05724633 0.1134363 insignificant 1 insignificant 0.915856 0.9663648 -0.0429962 6 0.873295 0.8722883 0.0010067 9.9825e-01 7.6846e-03 weaklyHypometh 1.0000e+00 0.56417801 insignificant 9.8779e-01 6.1568e-03 weaklyHypometh 1.0000e+00 0.541996 insignificant -0.0279674 4.1305e-01 insignificant 1.0000e+00 insignificant 0.917350 0.9413119 -0.0172048 6 0.933384 0.942329 -0.00894510 8.1479e-01 5.7110e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 7.5614e-01 1.0478e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.02628707 2.1605e-01 insignificant 1.0000000 insignificant 0.923821 0.9663648 -3.9826e-02 6 0.775856 0.8722883 -0.09643189 9.3550e-01 0.19222765 insignificant 1.0000e+00 1.000000 insignificant 9.9239e-01 0.06630247 insignificant 1.0000e+00 1.000000 insignificant -0.0852137 6.7045e-02 insignificant 7.6188e-01 insignificant 0.928136 0.9413119 -0.0052768 6 0.942904 0.942329 0.00057488 6.0722e-01 2.6252e-01 insignificant 1.0000e+00 1.00000000 insignificant 5.8882e-01 0.47659398 insignificant 1.0000e+00 1.000000 insignificant -8.3533e-02 3.0572e-02 weaklyHypometh 0.650475 insignificant 0.9698558 0.9413119 0.0261328 6 0.9636756 0.942329 0.02134688 2.6103e-01 7.8935e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.1721e-02 9.6552e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0016803 9.6082e-01 insignificant 1.0000e+00 insignificant chr11 449850 450850 37730 PTDSS2 ENSG00000174915 0.9547317 417 13 0.9266424 225 12 0.8983016 245 10 0.950893 401 12 0.898246 144 13 0.948429 480 11 0.9303891 190 12 0.874343 195 13 0.956285 212 11 0.942172 228 12 0.886404 422 14 0.897514 129 10 0.925029 310 13 0.950000 60 4 0.846249 204 10 0.859890 82 7 0.888095 70 9 0.904788 385 11 0.967111 268 14 0.947515 460 12 0.92991 132 11 0.9608740 157 8 0.931465 266 14 0.929092 175 9 0.970359 118 8 0.9783775 361 14 0.9202264 154 13 0.850000 78 9 0.896683 331 12 0.9370482 420 14 0.9626902 362 13 0.917191 619 13 0.9571076 240 10 0.937578 232 14 1.000000 380 9 0.9189103 113 7 0.808461 171 12 0.9740943 262 13 0.940843 332 12 0.9643158 335 13 0.942601 295 10 0.930273 366 12 0.964415 424 10 0.943094 0.9050893 0.918164 0.9671116 0.937264 0.943475 0.926376 0.876250 0.9287897 0.924523 0.898154 0.896923 0.9814180 0.939042 0.917136 0.953430 0.938321 0.933025 0.9639612 0.9548642 0.961483 0.956629 0.933124 0.9059137 0.958807 0.9827833 0.9032179 0.884399 0.903601 0.9529716 0.9531581 0.945143 0.9627022 0.953102 0.9863135 0.9042732 0.8841792 0.9737252 0.957296 0.9565865 0.9455524 0.9401966 0.9601095 6 0.935415 0.945477 -0.00990040 12 0.928609 0.939993 -0.01138350 9.8777e-01 1.5756e-01 insignificant 1.000000 1.0000000 insignificant 0.985382 0.23125755 insignificant 1 1.00000 insignificant -0.01434140 0.2778957 insignificant 1 insignificant 0.935245 0.9577969 -0.0209331 11 0.900035 0.8875478 0.0124872 9.8987e-01 3.3084e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant 9.9753e-01 3.5844e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.0150403 6.1701e-01 insignificant 1.0000e+00 insignificant 0.935253 0.9520548 -0.0151262 11 0.927391 0.946554 -0.01916333 9.9554e-01 6.3127e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7958e-01 1.0473e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.03083802 9.3254e-03 weaklyHypometh 0.2391118 insignificant 0.945477 0.9591691 -1.3042e-02 11 0.939993 0.9509441 -0.01095159 9.3777e-01 0.13615231 insignificant 1.0000e+00 1.000000 insignificant 9.6085e-01 0.20998752 insignificant 1.0000e+00 1.000000 insignificant -0.0006989 9.8164e-01 insignificant 1.0000e+00 insignificant 0.943937 0.9520548 -0.0075752 11 0.936109 0.946554 -0.01044508 8.6974e-01 2.6781e-01 insignificant 1.0000e+00 1.00000000 insignificant 7.5369e-01 0.36197296 insignificant 1.0000e+00 1.000000 insignificant -1.6497e-02 1.9921e-01 insignificant 1.000000 insignificant 0.9586357 0.9520548 0.0056642 11 0.9471706 0.946554 0.00061634 5.8546e-01 7.0828e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.3287e-01 7.2934e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0157977 5.9715e-01 insignificant 1.0000e+00 insignificant chr11 450050 451050 37731 PTDSS2 ENSG00000174915 0.9547317 417 13 0.9266424 225 12 0.8983016 245 10 0.950893 401 12 0.898246 144 13 0.948429 480 11 0.9303891 190 12 0.874343 195 13 0.956285 212 11 0.942172 228 12 0.886404 422 14 0.897514 129 10 0.925029 310 13 0.950000 60 4 0.846249 204 10 0.859890 82 7 0.888095 70 9 0.904788 385 11 0.967111 268 14 0.947515 460 12 0.92991 132 11 0.9608740 157 8 0.931465 266 14 0.929092 175 9 0.970359 118 8 0.9783775 361 14 0.9202264 154 13 0.850000 78 9 0.896683 331 12 0.9370482 420 14 0.9626902 362 13 0.917191 619 13 0.9571076 240 10 0.937578 232 14 1.000000 380 9 0.9189103 113 7 0.808461 171 12 0.9740943 262 13 0.940843 332 12 0.9643158 335 13 0.942601 295 10 0.930273 366 12 0.964415 424 10 0.943094 0.9050893 0.918164 0.9671116 0.937264 0.943475 0.926376 0.876250 0.9287897 0.924523 0.898154 0.896923 0.9814180 0.939042 0.917136 0.953430 0.938321 0.933025 0.9639612 0.9548642 0.961483 0.956629 0.933124 0.9059137 0.958807 0.9827833 0.9032179 0.884399 0.903601 0.9529716 0.9531581 0.945143 0.9627022 0.953102 0.9863135 0.9042732 0.8841792 0.9737252 0.957296 0.9565865 0.9455524 0.9401966 0.9601095 6 0.935415 0.945477 -0.00990040 12 0.928609 0.939993 -0.01138350 9.8777e-01 1.5756e-01 insignificant 1.000000 1.0000000 insignificant 0.985382 0.23125755 insignificant 1 1.00000 insignificant -0.01434140 0.2778957 insignificant 1 insignificant 0.935245 0.9577969 -0.0209331 11 0.900035 0.8875478 0.0124872 9.8987e-01 3.3084e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant 9.9753e-01 3.5844e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant -0.0150403 6.1701e-01 insignificant 1.0000e+00 insignificant 0.935253 0.9520548 -0.0151262 11 0.927391 0.946554 -0.01916333 9.9554e-01 6.3127e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7958e-01 1.0473e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.03083802 9.3254e-03 weaklyHypometh 0.2391118 insignificant 0.945477 0.9591691 -1.3042e-02 11 0.939993 0.9509441 -0.01095159 9.3777e-01 0.13615231 insignificant 1.0000e+00 1.000000 insignificant 9.6085e-01 0.20998752 insignificant 1.0000e+00 1.000000 insignificant -0.0006989 9.8164e-01 insignificant 1.0000e+00 insignificant 0.943937 0.9520548 -0.0075752 11 0.936109 0.946554 -0.01044508 8.6974e-01 2.6781e-01 insignificant 1.0000e+00 1.00000000 insignificant 7.5369e-01 0.36197296 insignificant 1.0000e+00 1.000000 insignificant -1.6497e-02 1.9921e-01 insignificant 1.000000 insignificant 0.9586357 0.9520548 0.0056642 11 0.9471706 0.946554 0.00061634 5.8546e-01 7.0828e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.3287e-01 7.2934e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0157977 5.9715e-01 insignificant 1.0000e+00 insignificant chr11 717350 718350 37736 EPS8L2 ENSG00000177106 0.6076711 762 23 0.5844922 697 25 0.6163361 879 25 0.632169 1068 24 0.554261 431 23 0.701261 1259 25 0.6580793 583 23 0.595483 893 23 0.611772 900 20 0.633422 844 19 0.600152 619 23 0.601236 535 19 0.599415 724 19 0.692921 740 19 0.675909 959 19 0.479969 375 20 0.554825 143 15 0.565409 1070 23 0.546127 786 23 0.618096 811 23 0.60779 418 25 0.5719155 507 22 0.564927 602 23 0.593498 466 23 0.631820 931 25 0.6409007 919 23 0.6235525 665 24 0.513275 520 19 0.592555 698 22 0.6427466 939 24 0.6391677 847 25 0.693807 1110 25 0.3438170 727 25 0.259451 598 24 0.172678 587 12 0.4838994 453 19 0.272809 725 25 0.5436966 825 23 0.662344 876 23 0.6478429 809 23 0.625818 598 23 0.601103 573 21 0.652450 798 24 0.601224 0.5271547 0.562391 0.5901920 0.548082 0.622315 0.591920 0.530178 0.5420534 0.603932 0.599101 0.578289 0.5366089 0.616888 0.603939 0.474664 0.574231 0.537464 0.5370626 0.6107166 0.584485 0.521683 0.570154 0.5687613 0.591439 0.6132382 0.5565181 0.577141 0.584746 0.5672820 0.5827754 0.666972 0.2841812 0.219674 0.2848579 0.3534691 0.2440855 0.3941227 0.595694 0.6248940 0.5509433 0.5622404 0.5874258 19 0.570841 0.590508 -0.01242111 23 0.631718 0.559723 0.07199554 8.4252e-01 2.5293e-01 insignificant 1.000000 1.0000000 insignificant 0.475617 0.57679784 insignificant 1 1.00000 insignificant -0.00321292 0.8591405 insignificant 1 insignificant 0.570964 0.2612590 0.3198344 23 0.641127 0.3185712 0.3225556 3.9683e-75 1.0000e+00 hypermethylated 9.9208e-73 1.00000000 hypermethylated 3.0438e-23 1.0000e+00 hypermethylated 1.0146e-20 1.000000 hypermethylated 0.2603917 5.8246e-03 weaklyHypermeth 1.2944e-01 insignificant 0.570888 0.6711391 -0.0159712 23 0.632752 0.625278 0.00747374 9.6879e-01 1.7156e-06 weaklyHypometh 1.0000e+00 3.4312e-04 weaklyHypometh 9.8602e-01 1.2096e-03 weaklyHypometh 1.0000e+00 0.1853012 insignificant -0.03146157 7.0572e-02 insignificant 0.9033016 insignificant 0.591036 0.2613811 3.3843e-01 23 0.593056 0.3306664 0.26238972 3.0047e-53 1.00000000 hypermethylated 7.5117e-51 1.000000 hypermethylated 2.7475e-18 1.00000000 hypermethylated 9.1584e-16 1.000000 hypermethylated 0.2636046 5.3641e-03 weaklyHypermeth 1.2475e-01 insignificant 0.591099 0.6710454 -0.0078225 23 0.587798 0.616330 -0.02853151 9.6172e-01 1.1359e-04 weaklyHypometh 1.0000e+00 0.01622779 weaklyHypometh 9.9715e-01 0.00278248 weaklyHypometh 1.0000e+00 0.397497 insignificant -2.8249e-02 1.2674e-01 insignificant 1.000000 insignificant 0.2613258 0.6712291 -0.3351732 23 0.3303701 0.639157 -0.30878669 1.0000e+00 1.3652e-36 hypomethylated 1.0000e+00 4.5508e-34 hypomethylated 1.0000e+00 1.1897e-14 hypomethylated 1.0000e+00 1.1897e-11 hypomethylated -0.2918532 3.5705e-03 weaklyHypometh 1.3733e-01 insignificant chr11 848450 849450 37738 TSPAN4 ENSG00000214063 0.9264446 1291 38 0.9176613 1039 44 0.8540075 1380 46 0.895934 852 33 0.904713 754 36 0.874869 1271 39 0.8676521 1129 37 0.897857 811 35 0.894798 930 38 0.911582 1094 39 0.902253 1575 39 0.901018 662 33 0.935071 1081 39 0.982281 172 4 0.936249 937 41 0.886930 440 33 0.857199 613 27 0.914798 974 35 0.900094 1163 39 0.882061 1252 42 0.87588 761 35 0.9352899 373 24 0.898401 1196 49 0.909876 587 30 0.957020 375 26 0.9529856 1028 46 0.9040145 775 34 0.902968 638 31 0.875001 755 33 0.9310191 1092 45 0.8784200 900 38 0.899088 1751 39 0.6888687 987 42 0.749569 975 37 0.860581 1340 31 0.9315232 349 22 0.810472 664 34 0.8446365 858 35 0.905772 1014 35 0.9512908 1406 40 0.946294 853 33 0.947458 1209 37 0.918288 929 34 0.959232 0.9135169 0.907360 0.9447818 0.930070 0.927467 0.906889 0.926582 0.9178403 0.928382 0.909290 0.922403 0.9501050 NA 0.929731 0.911553 0.877353 0.919836 0.9379854 0.9422518 0.913610 0.951196 0.921201 0.9445879 0.951230 0.9507471 0.9209382 0.920509 0.916354 0.9574461 0.9179012 0.925160 0.7083080 0.710764 0.8655634 0.9233026 0.7933047 0.9158541 0.959137 0.9672926 0.9605881 0.9652817 0.9561530 19 0.923172 0.930505 -0.00554761 40 0.874132 0.888948 -0.01481620 8.6774e-02 1.4532e-02 weaklyHypometh 1.000000 0.6605668 insignificant 0.784629 0.01498284 weaklyHypometh 1 0.83238 insignificant -0.00782316 0.4655398 insignificant 1 insignificant 0.923386 0.8070752 0.1121342 40 0.889097 0.7616966 0.1274006 3.1778e-42 1.0000e+00 weaklyHypermeth 3.5309e-40 1.00000000 weaklyHypermeth 3.1022e-10 9.9995e-01 weaklyHypermeth 2.8202e-08 1.000000 weaklyHypermeth 0.0878989 5.3372e-02 insignificant 7.3112e-01 insignificant 0.923101 0.9521345 -0.0341735 38 0.871664 0.901158 -0.02949429 9.9993e-01 3.4235e-08 weaklyHypometh 1.0000e+00 1.7117e-05 weaklyHypometh 1.0000e+00 1.1108e-05 weaklyHypometh 1.0000e+00 0.0037027 weaklyHypometh -0.03164679 2.1180e-02 weaklyHypometh 0.4328711 insignificant 0.931304 0.8070752 1.2400e-01 40 0.914506 0.7616966 0.15280946 5.9883e-31 0.99999961 weaklyHypermeth 5.9883e-29 1.000000 weaklyHypermeth 9.7421e-12 0.99999965 weaklyHypermeth 1.0825e-09 1.000000 weaklyHypermeth 0.0957220 4.0266e-02 weaklyHypermeth 5.8356e-01 insignificant 0.930771 0.9521345 -0.0266713 38 0.901476 0.901158 0.00031831 9.9539e-01 1.3203e-06 weaklyHypometh 1.0000e+00 0.00042474 weaklyHypometh 9.9989e-01 0.00492886 weaklyHypometh 1.0000e+00 0.616108 insignificant -2.3824e-02 7.9710e-02 insignificant 1.000000 insignificant 0.8070752 0.9528389 -0.1530654 38 0.7616966 0.919181 -0.15748479 1.0000e+00 6.4447e-19 weaklyHypometh 1.0000e+00 8.0559e-17 weaklyHypometh 1.0000e+00 1.4753e-09 weaklyHypometh 1.0000e+00 2.4588e-07 weaklyHypometh -0.1195456 1.7707e-02 weaklyHypometh 3.4052e-01 insignificant chr11 865350 866350 37739 TSPAN4 ENSG00000214063 0.7539663 336 9 0.9113450 280 11 0.8940378 187 9 0.942733 442 11 0.598611 113 6 0.925952 611 11 0.7882983 205 8 0.943202 273 10 0.858529 194 8 0.826684 222 7 0.861605 467 11 0.739624 71 4 0.827803 266 7 0.851824 160 7 0.857990 211 7 0.796429 46 7 1.000000 12 0 0.721849 411 9 0.921627 435 10 0.798462 429 9 0.88442 156 11 0.9498630 123 8 0.757285 333 9 0.920960 117 10 0.921304 257 11 0.8245396 402 11 0.8509561 203 7 0.923016 134 10 0.834552 438 11 0.8597643 400 11 0.8738503 407 11 0.882820 501 11 0.8221652 228 10 0.888866 237 11 0.660714 420 9 0.6416667 59 4 0.654315 138 11 0.6832612 564 11 0.915612 308 9 0.8363215 446 11 0.924175 269 11 0.812633 458 7 0.964665 348 11 0.922103 0.8573756 0.908195 0.9333475 0.846264 0.952260 0.890287 0.932456 0.9256256 0.930047 0.935721 0.776996 0.9347159 0.947943 0.928488 0.904867 0.967577 0.886728 0.9341301 0.9633007 0.955365 0.947063 0.904660 0.8760632 0.865610 0.9338681 0.8980819 0.928336 0.945010 0.9327341 0.9486334 0.921168 0.9006230 0.905841 0.9406404 0.8571380 0.9438208 0.7373087 0.944740 0.9274368 0.9172869 0.9129758 0.9666554 6 0.924409 0.932218 -0.00873760 11 0.831166 0.829074 0.00209144 9.3565e-01 1.6301e-01 insignificant 1.000000 1.0000000 insignificant 0.878021 0.29072084 insignificant 1 1.00000 insignificant -0.03258179 0.2191622 insignificant 1 insignificant 0.924553 0.8289714 0.0592357 11 0.842132 0.7041740 0.1379582 2.8767e-05 8.3802e-01 weaklyHypermeth 4.1691e-04 1.00000000 weaklyHypermeth 1.5240e-01 6.1314e-01 insignificant 1.0000e+00 1.000000 insignificant 0.1158637 4.1620e-02 weaklyHypermeth 5.9458e-01 insignificant 0.927783 0.9442013 -0.0157133 11 0.865464 0.935400 -0.06993585 9.3812e-01 3.1835e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3333e-01 4.9871e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.04965273 1.9423e-01 insignificant 1.0000000 insignificant 0.932120 0.8284672 8.1960e-02 11 0.806753 0.6601631 0.14658961 4.8631e-06 0.80990707 weaklyHypermeth 7.5987e-05 1.000000 weaklyHypermeth 5.3041e-02 0.70043642 insignificant 4.5725e-01 1.000000 insignificant 0.1484455 1.5381e-02 weaklyHypermeth 2.9379e-01 insignificant 0.934764 0.9436851 -0.0072147 11 0.914860 0.868585 0.04627480 3.9512e-01 6.4746e-01 insignificant 1.0000e+00 1.00000000 insignificant 5.8814e-01 0.86492569 insignificant 1.0000e+00 1.000000 insignificant -1.7071e-02 6.1577e-01 insignificant 1.000000 insignificant 0.8311927 0.9441708 -0.0672750 11 0.7968842 0.930016 -0.13313222 7.9940e-01 1.5732e-02 weaklyHypometh 1.0000e+00 1.6387e-01 insignificant 7.2343e-01 3.1110e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.1655164 1.1216e-02 weaklyHypometh 2.5883e-01 insignificant chr11 932550 933550 37741 AP2A2 ENSG00000183020 0.8541667 81 6 0.7459100 175 7 0.7923406 179 6 0.778685 81 7 0.697690 145 4 0.817718 243 10 0.6916669 202 5 0.910415 166 5 0.808507 132 4 0.867430 124 4 0.895108 207 7 0.846882 174 3 0.781563 183 5 0.944444 17 2 0.764913 152 5 0.792750 114 4 0.840737 100 3 0.803810 73 4 0.791365 144 5 0.820676 131 5 0.89524 81 7 0.5000000 8 0 0.646727 112 6 0.840776 73 5 0.609524 57 4 0.8942071 269 8 0.6700752 66 5 0.906429 45 4 0.734355 182 5 0.6734543 341 8 0.8905703 326 7 0.888156 187 9 0.5679530 227 7 0.360289 151 5 0.555094 112 4 0.3750000 19 1 0.649172 65 4 0.7230512 281 7 0.823542 90 6 0.7027993 108 6 0.802083 35 2 0.826190 62 3 0.688668 71 5 0.943023 0.8329425 0.750270 0.8494270 0.738208 0.916896 0.743595 0.908545 0.8502409 0.918113 0.933290 0.807695 0.8253031 0.873344 0.847087 0.871754 0.874176 0.906597 0.8244811 0.8938528 0.929264 0.747466 0.705370 0.8424923 0.762306 0.8686140 0.7675030 0.925664 0.853164 0.9265273 0.8921191 0.925495 0.7285817 0.531291 0.6994735 0.5056943 0.6493390 0.7498415 0.903992 0.8979160 0.9786822 0.9782485 0.8177196 0 0.765060 0.816724 -0.04515973 7 0.752833 0.833271 -0.08043774 6.1932e-01 7.8755e-02 insignificant 1.000000 1.0000000 insignificant 0.387115 0.54695122 insignificant 1 1.00000 insignificant 0.04987949 0.2658941 insignificant 1 insignificant 0.762846 0.4783626 0.2826116 7 0.793251 0.5963551 0.1968962 1.4282e-12 9.9996e-01 hypermethylated 3.9672e-11 1.00000000 hypermethylated 1.1193e-05 9.9998e-01 hypermethylated 3.3917e-04 1.000000 hypermethylated 0.2739121 4.9658e-03 lowCoverage 1.1548e-01 lowCoverage 0.762846 0.7377049 0.1021064 5 0.793251 0.661235 0.13201657 2.6282e-04 1.0661e-05 weaklyHypermeth 9.7341e-03 1.5230e-03 weaklyHypermeth 8.5896e-02 1.8854e-02 inconclusive 1.0000e+00 0.7541748 insignificant 0.04368223 2.3908e-01 lowCoverage 1.0000000 lowCoverage 0.816657 0.4783626 3.1696e-01 7 0.819361 0.5963551 0.22300621 5.7640e-12 0.99994530 hypermethylated 1.9213e-10 1.000000 hypermethylated 8.5116e-04 0.99988361 hypermethylated 1.8915e-02 1.000000 hypermethylated 0.2240326 1.1276e-02 lowCoverage 2.2551e-01 lowCoverage 0.816657 0.7377049 0.1622582 5 0.819361 0.661235 0.15812654 2.0747e-07 8.7940e-03 weaklyHypermeth 1.5959e-05 0.47505013 weaklyHypermeth 1.6625e-01 0.03383655 inconclusive 1.0000e+00 1.000000 insignificant -6.1973e-03 9.0407e-01 lowCoverage 1.000000 lowCoverage 0.4783626 0.7377049 -0.1164778 5 0.5963551 0.661235 -0.06487968 5.3662e-01 9.3617e-04 weaklyHypometh 1.0000e+00 1.4628e-02 weaklyHypometh 9.4695e-01 2.1535e-03 weaklyHypometh 1.0000e+00 5.5218e-02 weaklyHypometh -0.2302299 9.9429e-03 lowCoverage 2.4251e-01 lowCoverage chr11 1821550 1822550 37746 TNNI2 ENSG00000130598 0.9459374 182 5 0.8465839 77 5 0.8827731 103 6 0.916946 131 5 0.654575 67 5 0.910958 200 7 0.8857405 69 5 0.904921 91 5 0.846939 74 5 0.970635 95 5 0.907561 151 7 0.891429 41 5 0.870604 71 5 0.904003 52 5 0.885110 92 5 1.000000 10 2 NA 0 0 0.873969 264 5 0.888276 103 5 0.894588 215 5 0.90232 73 5 0.8812281 57 5 0.954011 102 5 0.814866 65 5 0.859556 55 2 0.9095098 99 5 0.9042100 135 5 0.600000 22 0 0.925325 96 5 0.8551760 80 5 0.9124326 93 5 0.950723 218 5 0.6758210 111 5 0.761286 204 5 0.642857 94 7 NA 0 0 0.490320 74 5 0.8547619 188 5 0.873583 239 7 0.8185285 193 7 0.831251 119 5 0.762729 123 5 0.838705 191 6 0.911146 0.7653862 0.816505 0.8812811 0.607830 0.916552 0.847598 0.838621 0.8661581 0.950216 0.856037 0.862136 0.8902166 0.882734 0.816715 0.953039 NA 0.862227 0.8602298 0.8535886 0.816562 0.879884 0.928830 0.8439134 0.770901 0.8396777 0.8612018 0.718447 0.916814 0.8966090 0.8778006 0.924541 0.6445765 0.702552 0.5631068 NA 0.6764274 0.8305016 0.879026 0.8642919 0.7633087 0.9000747 0.8708067 2 0.866794 0.875229 -0.00900551 5 0.782323 0.899315 -0.11699258 7.0733e-01 6.9780e-01 insignificant 1.000000 1.0000000 insignificant 0.966629 0.26631104 insignificant 1 1.00000 insignificant 0.01605631 0.6160874 lowCoverage 1 lowCoverage 0.866794 0.7055306 0.1526728 5 0.782323 0.5959291 0.1863938 1.6117e-10 9.9917e-01 weaklyHypermeth 4.2412e-09 1.00000000 weaklyHypermeth 2.0624e-03 9.9965e-01 weaklyHypermeth 3.8192e-02 1.000000 weaklyHypermeth 0.2034933 2.6612e-02 lowCoverage 4.4354e-01 lowCoverage 0.867689 0.8554913 0.0133292 5 0.907323 0.732389 0.17493419 1.3443e-02 9.8192e-01 weaklyHypermeth 3.4435e-01 1.0000e+00 insignificant 1.9150e-02 9.8452e-01 weaklyHypermeth 5.5344e-01 1.0000000 insignificant 0.06354335 2.2244e-02 lowCoverage 0.4361647 lowCoverage 0.873857 0.7034277 1.6192e-01 5 0.786119 0.4767432 0.30937573 1.1852e-07 0.99980860 weaklyHypermeth 2.8908e-06 1.000000 weaklyHypermeth 1.8872e-03 0.99999615 weaklyHypermeth 3.5607e-02 1.000000 weaklyHypermeth 0.1874369 3.2837e-02 lowCoverage 4.9760e-01 lowCoverage 0.875115 0.8564815 0.0205256 5 0.884932 0.837016 0.04791630 1.3924e-01 9.6944e-01 insignificant 1.0000e+00 1.00000000 insignificant 2.1199e-02 0.99885447 weaklyHypermeth 5.7294e-01 1.000000 insignificant 4.7487e-02 1.6765e-01 lowCoverage 1.000000 lowCoverage 0.7065868 0.8564815 -0.1464389 5 0.6810618 0.837016 -0.15595379 4.2335e-02 4.6014e-04 weaklyHypometh 1.0000e+00 8.2168e-03 weaklyHypometh 7.6500e-01 3.9763e-02 weaklyHypometh 1.0000e+00 5.0332e-01 insignificant -0.1399499 8.2583e-02 lowCoverage 9.6026e-01 lowCoverage chr11 1956550 1957550 37747 ENSG00000205751 0.7928237 392 15 0.6562899 424 17 0.7183823 333 17 0.801735 489 15 0.709268 292 17 0.722838 665 17 0.8019766 313 14 0.828155 362 17 0.754077 353 17 0.833173 377 17 0.873858 487 17 0.715750 201 12 0.768923 510 17 0.717500 243 15 0.760074 373 16 0.451333 176 12 0.614394 108 11 0.737578 715 15 0.898331 418 17 0.749781 415 16 0.72492 234 17 0.6365235 243 10 0.727310 299 18 0.802219 222 16 0.792927 203 12 0.8711971 469 17 0.8405119 238 16 0.823197 176 11 0.802174 435 17 0.8688657 568 17 0.7954573 477 17 0.787765 543 15 0.6106583 396 17 0.501332 429 17 0.308020 355 11 0.5677797 115 8 0.592030 333 19 0.6963132 632 17 0.540632 573 14 0.6616434 498 15 0.663131 478 16 0.528732 619 15 0.611533 456 16 0.845511 0.7528835 0.734911 0.8259734 0.878809 0.826119 0.868244 0.750851 0.7507846 0.831564 0.844075 0.673358 0.8467102 0.757220 0.803493 0.595961 0.655877 0.717322 0.8658768 0.8294462 0.821315 0.581350 0.765768 0.8792455 0.882239 0.8430003 0.8773271 0.911444 0.798692 0.8807790 0.8331776 0.893267 0.5769273 0.534039 0.5193357 0.5302415 0.6302325 0.5911720 0.597649 0.5762011 0.5429147 0.4819312 0.6737365 11 0.812361 0.840029 -0.02936529 17 0.717306 0.669799 0.04750683 9.9721e-01 5.2295e-02 insignificant 1.000000 1.0000000 insignificant 0.999527 0.00051902 weaklyHypometh 1 0.17301 insignificant -0.04411030 0.1388715 insignificant 1 insignificant 0.812263 0.5878707 0.2242601 17 0.694690 0.5103308 0.1843597 6.0128e-27 9.9399e-01 hypermethylated 3.5369e-25 1.00000000 hypermethylated 6.9204e-10 9.4435e-01 hypermethylated 5.3234e-08 1.000000 hypermethylated 0.1992897 1.2007e-02 weaklyHypermeth 2.3542e-01 insignificant 0.812721 0.5476372 0.2250390 15 0.747754 0.562673 0.18508160 1.7509e-27 9.7314e-01 hypermethylated 5.8364e-25 1.0000e+00 hypermethylated 3.4822e-09 9.4297e-01 hypermethylated 6.9643e-07 1.0000000 hypermethylated 0.14417761 2.9371e-03 weaklyHypermeth 0.1129664 insignificant 0.840400 0.5878707 2.5403e-01 17 0.683383 0.5103308 0.17305230 3.7712e-17 0.99999995 hypermethylated 1.7958e-15 1.000000 hypermethylated 7.1533e-11 0.99999995 hypermethylated 5.9611e-09 1.000000 hypermethylated 0.2434000 4.9161e-03 weaklyHypermeth 1.1991e-01 insignificant 0.840937 0.5476372 0.2617388 15 0.746269 0.562673 0.18359595 6.5459e-18 9.9494e-01 hypermethylated 2.1820e-15 1.00000000 hypermethylated 1.0166e-10 0.99351310 hypermethylated 1.0166e-07 1.000000 hypermethylated 1.8829e-01 6.6549e-04 weaklyHypermeth 0.087718 weaklyHypermeth 0.5885486 0.5476735 -0.0291131 15 0.5361080 0.565657 -0.02954904 2.6289e-05 4.8194e-04 weaklyHypometh 4.3815e-03 8.4550e-03 weaklyHypometh 8.4673e-02 4.2049e-03 weaklyHypometh 1.0000e+00 8.7603e-02 weaklyHypometh -0.0551121 3.9675e-01 insignificant 1.0000e+00 insignificant chr11 2281150 2282150 37750 TSPAN32 ENSG00000064201 0.8214652 113 5 0.7773810 151 5 0.6895797 157 5 0.742975 120 5 0.764633 95 4 0.726001 219 5 0.8225387 66 4 0.793331 158 5 0.619884 125 4 0.849627 123 5 0.856166 145 5 0.480640 59 4 0.872731 168 5 0.865000 73 3 0.885142 158 5 0.638095 22 2 0.384615 16 1 0.795924 158 5 0.868868 147 5 0.759606 129 5 0.78486 75 5 0.5368927 109 5 0.772564 54 5 0.802857 98 5 0.867949 59 5 0.9081931 226 5 0.7160025 104 5 0.743950 67 4 0.887597 171 5 0.8564712 247 5 0.8923847 221 5 0.857707 149 5 0.5463107 141 5 0.625704 87 5 0.678947 89 3 0.5000000 32 4 0.647768 97 5 0.7554710 178 5 0.611176 99 5 0.5890819 114 5 0.665005 82 5 0.483225 126 5 0.671706 97 5 0.810007 0.8053142 0.679934 0.7634051 0.757832 0.738032 0.792545 0.803185 0.6426529 0.820772 0.866592 0.574221 0.8583170 0.786078 0.863582 0.698627 0.542931 0.797260 0.8662093 0.7486649 0.797462 0.520206 0.812041 0.7679751 0.888090 0.9023798 0.6849591 0.777896 0.876425 0.8576653 0.8674881 0.850531 0.4903227 0.571103 0.6377430 0.4799243 0.6068468 0.6926330 0.613291 0.5937066 0.7117856 0.5636689 0.7383741 4 0.779351 0.824684 -0.04286235 5 0.780106 0.826917 -0.04681099 9.8462e-01 4.9077e-02 weaklyHypometh 1.000000 1.0000000 insignificant 0.969465 0.11026471 insignificant 1 1.00000 insignificant -0.05157499 0.2333070 lowCoverage 1 lowCoverage 0.779351 0.6362179 0.1288468 5 0.780106 0.6859914 0.0941144 1.0055e-04 6.2499e-01 weaklyHypermeth 1.3059e-03 1.00000000 weaklyHypermeth 5.0727e-02 7.2261e-01 insignificant 4.8415e-01 1.000000 insignificant 0.1250100 2.2814e-02 lowCoverage 4.0024e-01 lowCoverage 0.779351 0.5135135 0.2170493 5 0.780106 0.582475 0.19763058 8.3769e-08 9.7424e-01 hypermethylated 8.3769e-06 1.0000e+00 hypermethylated 3.8348e-03 9.5033e-01 weaklyHypermeth 1.5339e-01 1.0000000 insignificant 0.14667126 7.7427e-03 lowCoverage 0.2277264 lowCoverage 0.824684 0.6362179 1.7489e-01 5 0.826917 0.6859914 0.14092542 3.8329e-04 0.97234219 weaklyHypermeth 4.8518e-03 1.000000 weaklyHypermeth 3.6747e-02 0.88077889 weaklyHypermeth 3.4997e-01 1.000000 insignificant 0.1765850 3.4962e-03 lowCoverage 8.7406e-02 lowCoverage 0.824684 0.5135135 0.2824745 5 0.826917 0.582475 0.24444157 2.5547e-08 9.9142e-01 hypermethylated 2.8386e-06 1.00000000 hypermethylated 3.3022e-04 0.98654648 hypermethylated 2.7518e-02 1.000000 hypermethylated 1.9825e-01 1.2905e-03 lowCoverage 0.107542 lowCoverage 0.6362179 0.5135135 0.0999933 5 0.6859914 0.582475 0.10351616 4.3847e-03 1.6807e-01 weaklyHypermeth 3.3728e-01 1.0000e+00 insignificant 7.5185e-02 3.8093e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0216612 6.7905e-01 lowCoverage 1.0000e+00 lowCoverage chr11 2747750 2748750 37755 KCNQ1 ENSG00000053918 0.8935574 193 7 0.7718189 133 7 0.8023408 172 7 0.918042 245 7 0.770315 80 6 0.915810 262 7 0.8201247 114 7 0.895490 159 7 0.660952 133 5 0.819271 221 5 0.926189 177 7 0.882449 119 7 0.691912 87 6 0.900330 111 6 0.920071 243 6 0.879651 141 6 0.706667 20 3 0.856253 227 7 0.915439 147 7 0.899550 159 7 0.85188 63 6 0.8824705 114 6 0.883193 113 7 0.601256 62 4 0.868258 153 7 0.8734165 162 7 0.7501937 102 6 0.843371 139 7 0.931238 146 7 0.9288618 216 7 0.8844647 173 7 0.899871 226 7 0.8039467 142 7 0.808132 134 7 0.985338 208 7 0.5535714 30 2 0.688831 136 7 0.7235237 153 7 0.937260 244 7 0.9389871 155 7 0.916019 184 7 0.893130 186 6 0.929373 216 7 0.867537 0.7782945 0.825459 0.9252312 0.813453 0.903741 0.831128 0.868379 0.8696100 0.915119 0.905604 0.870460 0.7906878 0.895158 0.892311 0.836454 0.707742 0.868359 0.9073163 0.9427957 0.841366 0.889574 0.879587 0.6336098 0.891651 0.8938173 0.7176466 0.823721 0.923184 0.9338346 0.9057279 0.918962 0.7778973 0.779279 0.9936693 0.4956761 0.8625209 0.7159176 0.933392 0.9202971 0.9314344 0.8834632 0.9295399 6 0.874721 0.868784 0.00654034 7 0.874215 0.867520 0.00669473 5.4476e-01 7.5044e-01 insignificant 1.000000 1.0000000 insignificant 0.749141 0.33594413 insignificant 1 1.00000 insignificant -0.00756115 0.8167212 insignificant 1 insignificant 0.874324 0.8418431 0.0300596 7 0.857723 0.6618570 0.1958657 1.1897e-01 5.6977e-01 insignificant 8.1488e-01 1.00000000 insignificant 3.5893e-01 2.6625e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0817543 2.3352e-01 insignificant 1.0000e+00 insignificant 0.874721 0.9248731 -0.0485033 7 0.874215 0.927121 -0.05290569 9.9987e-01 1.0904e-02 weaklyHypometh 1.0000e+00 4.7294e-01 insignificant 9.9968e-01 6.5025e-03 weaklyHypometh 1.0000e+00 0.4644635 insignificant -0.08064219 6.4741e-04 weaklyHypometh 0.0621129 weaklyHypometh 0.868784 0.8450000 2.0987e-02 7 0.867520 0.8509591 0.01656118 1.9397e-01 0.24842639 insignificant 1.0000e+00 1.000000 insignificant 4.6168e-01 0.11078525 insignificant 1.0000e+00 1.000000 insignificant 0.0893155 2.0827e-01 insignificant 1.0000e+00 insignificant 0.868784 0.9248731 -0.0571380 7 0.867520 0.927121 -0.05960042 9.9800e-01 3.0678e-03 weaklyHypometh 1.0000e+00 0.21912926 insignificant 9.5130e-01 0.02343873 weaklyHypometh 1.0000e+00 1.000000 insignificant -7.3081e-02 2.0258e-02 weaklyHypometh 0.517649 insignificant 0.8450000 0.9248731 -0.0807619 7 0.8509591 0.927121 -0.07616160 9.7061e-01 9.0095e-02 insignificant 1.0000e+00 6.8775e-01 insignificant 8.0174e-01 1.6699e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.1623965 3.9581e-02 weaklyHypometh 6.2826e-01 insignificant chr11 2755950 2756950 37756 ENSG00000218400 0.9210586 217 7 0.6689473 209 9 0.7714402 155 9 0.771900 170 4 0.897672 112 9 0.762109 330 9 0.6747882 172 9 0.809000 196 12 0.799272 112 9 0.778663 81 4 0.777830 277 13 0.869281 85 5 0.839494 199 9 0.875000 27 3 0.636661 121 7 0.930855 57 4 0.770833 63 6 0.473669 389 4 0.825092 71 9 0.719069 58 3 0.88392 112 9 0.4241627 77 5 0.963908 186 9 0.903485 53 4 0.770833 40 5 0.9114332 96 6 0.8479965 157 9 0.847627 103 8 0.833542 133 11 0.8491003 227 11 0.7337136 229 11 0.929304 247 9 0.2954233 304 9 0.384449 122 6 0.267602 233 6 0.0000000 13 0 0.349739 113 7 0.3956991 429 13 0.604256 130 7 0.4445793 227 7 0.490410 197 6 0.190649 344 5 0.597324 102 7 0.906780 0.7292192 0.884861 0.7566812 0.960268 0.928298 0.830208 0.819836 0.8394274 0.897957 0.844484 0.802014 0.7702570 0.920064 0.851461 0.898697 0.853831 0.572823 0.8436791 0.7825579 0.889689 0.212947 0.952964 0.8576118 0.750000 0.8774500 0.8435347 0.920238 0.817391 0.9170088 0.8354033 0.930872 0.2049731 0.185786 0.4113947 0.1283922 0.3848739 0.2423334 0.484614 0.5225733 0.5372151 0.2793570 0.6913162 0 0.832635 0.864458 -0.02686693 7 0.734756 0.821569 -0.08681352 9.9867e-01 1.4110e-01 insignificant 1.000000 1.0000000 insignificant 0.987363 0.31065086 insignificant 1 1.00000 insignificant -0.04628752 0.3424917 insignificant 1 insignificant 0.833172 0.3278418 0.4358103 7 0.791013 0.3631626 0.4278503 1.5338e-55 1.0000e+00 hypermethylated 2.5563e-53 1.00000000 hypermethylated 2.7660e-15 1.0000e+00 hypermethylated 3.9514e-13 1.000000 hypermethylated 0.4964795 1.4680e-04 hypermethylated 6.6729e-03 hypermethylated 0.834416 0.5030000 0.3511532 7 0.755299 0.473232 0.28206682 2.6710e-33 1.0000e+00 hypermethylated 2.6710e-30 1.0000e+00 hypermethylated 3.0577e-11 9.9995e-01 hypermethylated 1.0192e-08 1.0000000 hypermethylated 0.31318783 1.1347e-02 weaklyHypermeth 0.2638721 insignificant 0.865175 0.3278418 4.8905e-01 9 0.830953 0.3631626 0.46779052 2.4376e-44 0.99999983 hypermethylated 3.4823e-42 1.000000 hypermethylated 3.0953e-12 0.99999755 hypermethylated 3.8691e-10 1.000000 hypermethylated 0.5427671 2.4102e-05 hypermethylated 1.6068e-03 hypermethylated 0.864571 0.5030000 0.3840697 7 0.807144 0.473232 0.33391181 7.4823e-27 9.9993e-01 hypermethylated 7.4823e-24 1.00000000 hypermethylated 9.2653e-10 0.99999877 hypermethylated 4.6326e-07 1.000000 hypermethylated 3.5948e-01 4.7631e-03 weaklyHypermeth 0.260133 insignificant 0.3289256 0.5035035 -0.0274359 7 0.3910982 0.509634 -0.11853605 8.4874e-01 4.2692e-04 weaklyHypometh 1.0000e+00 7.7622e-03 weaklyHypometh 9.8216e-01 3.3626e-03 weaklyHypometh 1.0000e+00 7.3133e-02 weaklyHypometh -0.1832917 9.2877e-02 insignificant 1.0000e+00 insignificant chr11 2756450 2757450 37757 ENSG00000218400 0.9195343 354 10 0.7383857 309 12 0.8562499 255 12 0.848481 262 7 0.882013 147 12 0.930689 379 12 0.8791916 254 12 0.842299 195 11 0.869860 211 12 0.867110 186 9 0.770860 319 12 0.871899 188 9 0.836754 238 10 1.000000 7 1 0.904570 219 10 0.908596 153 9 0.818952 116 9 0.587844 392 7 0.880687 114 9 0.817794 261 8 0.91297 163 9 0.4777994 154 6 0.926466 310 12 0.871835 139 9 0.823437 131 8 0.8892639 209 11 0.8812888 219 12 0.857851 159 11 0.844833 168 10 0.9101321 307 12 0.8587779 259 12 0.914057 425 12 0.1795797 366 12 0.165132 218 9 0.356243 279 8 0.1898934 87 5 0.306795 174 10 0.2982286 381 12 0.657120 301 10 0.5742703 355 10 0.609963 292 9 0.489854 406 8 0.668575 280 10 0.917699 0.7903660 0.840270 0.8994339 0.922678 0.957688 0.888642 0.853714 0.8734529 0.940355 0.823668 0.852743 0.8546800 NA 0.920607 0.908284 0.811995 0.810587 0.9123089 0.8733345 0.908771 0.758749 0.918152 0.8785342 0.864849 0.8533822 0.9133177 0.907248 0.856793 0.9025093 0.9024426 0.907076 0.1392070 0.248788 0.4716556 0.3132321 0.2936264 0.4557011 0.817123 0.7608103 0.8195471 0.7412554 0.7523184 5 0.864444 0.883844 -0.01558030 10 0.781439 0.861200 -0.07976089 9.9442e-01 1.6006e-01 insignificant 1.000000 1.0000000 insignificant 0.969422 0.34293523 insignificant 1 1.00000 insignificant 0.00419586 0.9166980 insignificant 1 insignificant 0.864865 0.2485050 0.5784151 10 0.858743 0.2557136 0.6030295 2.3701e-85 1.0000e+00 hypermethylated 1.1851e-82 1.00000000 hypermethylated 6.7273e-24 1.0000e+00 hypermethylated 3.3636e-21 1.000000 hypermethylated 0.6022765 1.2463e-07 hypermethylated 1.1330e-05 hypermethylated 0.864675 0.7337821 0.1580260 10 0.792686 0.536660 0.25602583 5.6049e-28 1.0000e+00 weaklyHypermeth 2.8025e-25 1.0000e+00 weaklyHypermeth 1.4073e-09 1.0000e+00 weaklyHypermeth 3.5183e-07 1.0000000 weaklyHypermeth 0.25163204 2.6972e-04 hypermethylated 0.0337149 hypermethylated 0.884338 0.2485050 6.0510e-01 12 0.882055 0.2557136 0.62634168 2.2736e-64 1.00000000 hypermethylated 1.1368e-61 1.000000 hypermethylated 1.9151e-19 1.00000000 hypermethylated 9.5757e-17 1.000000 hypermethylated 0.5980806 4.4860e-09 hypermethylated 8.9721e-07 hypermethylated 0.883712 0.7337821 0.1618171 10 0.839846 0.536660 0.30318584 1.4537e-22 1.0000e+00 weaklyHypermeth 7.2686e-20 1.00000000 weaklyHypermeth 2.3246e-08 0.99999999 weaklyHypermeth 5.8115e-06 1.000000 weaklyHypermeth 2.4744e-01 1.8868e-04 hypermethylated 0.078638 hypermethylated 0.2485050 0.7342315 -0.3828939 10 0.2557136 0.581382 -0.32566814 1.0000e+00 1.1381e-14 hypomethylated 1.0000e+00 7.5873e-13 hypomethylated 1.0000e+00 4.7269e-08 hypomethylated 1.0000e+00 5.2521e-06 hypomethylated -0.3506444 3.4900e-05 hypomethylated 6.9799e-03 hypomethylated chr11 2757650 2758650 37758 ENSG00000218400 0.8874169 676 10 0.6957534 255 11 0.6728078 240 10 0.857288 522 10 0.857266 127 11 0.734725 646 10 0.8072188 145 7 0.866243 330 11 0.657103 169 9 0.815476 176 8 0.822073 461 15 0.767222 90 4 0.858678 351 14 0.877929 114 7 0.753983 235 13 0.650000 40 3 0.716667 41 2 0.827602 1039 10 0.839564 379 14 0.886810 426 10 0.88652 144 13 0.7812145 161 9 0.895115 270 10 0.755159 122 9 0.866401 428 10 0.8586277 439 15 0.8249501 242 13 0.761917 118 5 0.889191 364 13 0.8866907 487 15 0.8753951 414 15 0.854991 493 13 0.8401177 354 14 0.749495 417 15 0.774518 252 9 0.8138574 225 10 0.877306 267 11 0.7573848 467 14 0.743401 349 10 0.6344371 442 12 0.709901 459 10 0.652450 749 10 0.735287 342 10 0.852362 0.7902056 0.782836 0.8256449 0.869639 0.867974 0.813982 0.823388 0.6995506 0.841064 0.891699 0.803059 0.8310768 0.786490 0.762644 0.864887 0.749973 0.780811 0.8516938 0.8691198 0.906086 0.740242 0.857792 0.8191481 0.852871 0.8584634 0.8242752 0.827518 0.836896 0.8762414 0.8499431 0.899485 0.8242242 0.720600 0.7100379 0.7130660 0.8356244 0.6742647 0.760031 0.7245239 0.6467587 0.6592590 0.6523805 6 0.820560 0.856599 -0.03739396 13 0.781958 0.864879 -0.08292086 9.9995e-01 4.2684e-03 weaklyHypometh 1.000000 0.3048847 insignificant 0.999612 0.00330244 weaklyHypometh 1 0.33024 insignificant -0.05209005 0.0327504 weaklyHypometh 1 insignificant 0.820997 0.7597173 0.0550390 12 0.840782 0.8075373 0.0332444 2.5024e-07 2.6749e-07 weaklyHypermeth 5.1070e-06 0.00013374 weaklyHypermeth 2.2837e-01 2.1186e-04 inconclusive 1.0000e+00 0.042372 inconclusive -0.0095220 7.3291e-01 insignificant 1.0000e+00 insignificant 0.820588 0.6710807 0.1500169 10 0.781958 0.608932 0.17302610 3.0921e-19 9.9999e-01 weaklyHypermeth 6.1841e-17 1.0000e+00 weaklyHypermeth 4.8302e-07 9.9857e-01 weaklyHypermeth 6.9003e-05 1.0000000 weaklyHypermeth 0.09749603 6.2323e-03 weaklyHypermeth 0.2077425 insignificant 0.856403 0.7595960 9.5522e-02 13 0.856434 0.7955083 0.06092555 3.9881e-07 0.01374177 weaklyHypermeth 7.9762e-06 1.000000 weaklyHypermeth 2.4469e-02 0.04466069 weaklyHypermeth 2.8126e-01 1.000000 insignificant 0.0425681 1.2402e-01 insignificant 1.0000e+00 insignificant 0.856870 0.6713675 0.1881800 10 0.874291 0.646990 0.22730079 1.0365e-15 1.0000e+00 weaklyHypermeth 2.5911e-13 1.00000000 weaklyHypermeth 2.0815e-07 0.99991414 weaklyHypermeth 2.9736e-05 1.000000 weaklyHypermeth 1.4959e-01 5.1464e-04 weaklyHypermeth 0.087718 weaklyHypermeth 0.7595960 0.6713675 0.1180020 10 0.7955083 0.646990 0.14851810 5.0298e-17 3.8511e-01 weaklyHypermeth 2.5149e-14 1.0000e+00 weaklyHypermeth 3.9851e-06 6.7633e-01 weaklyHypermeth 1.9925e-03 1.0000e+00 weaklyHypermeth 0.1070180 6.5262e-03 weaklyHypermeth 2.0394e-01 insignificant chr11 2788650 2789650 37759 ENSG00000218400 0.8498667 530 9 0.8607633 484 12 0.8495347 143 6 0.910478 500 12 0.814526 192 8 0.857319 780 12 0.7696870 220 8 0.881746 270 12 0.615095 163 8 0.915006 204 10 0.894350 528 12 0.814744 60 3 0.869348 262 12 0.792133 152 9 0.930014 177 6 0.950000 25 2 NA 0 0 0.894577 1093 9 0.898441 588 12 0.872328 504 12 0.89333 151 12 0.9444444 29 2 0.898362 273 12 0.848600 199 12 0.887908 115 6 0.9163073 547 12 0.8603350 238 8 0.884442 121 7 0.913200 577 12 0.9178682 613 12 0.9270488 700 12 0.929582 539 12 0.6265823 412 12 0.867296 377 12 0.845159 404 8 1.0000000 10 2 0.582782 264 12 0.7497960 686 12 0.855116 433 12 0.9619521 493 9 0.834806 362 9 0.740345 611 9 0.902690 327 9 0.885379 0.8201454 0.837982 0.8879894 0.863709 0.822698 0.763820 0.818992 0.6291873 0.922155 0.889396 0.682094 0.8921706 0.756432 0.894338 0.947584 NA 0.922807 0.8890224 0.8600285 0.886828 0.975835 0.875036 0.8716579 0.959015 0.9035325 0.7919761 0.928642 0.923981 0.9131301 0.9351234 0.900656 0.6561896 0.879340 0.8148334 NA 0.7162848 0.8429014 0.897759 0.9408179 0.8464539 0.7142927 0.8999259 2 0.870527 0.905877 -0.03746173 12 0.888023 0.917301 -0.02927815 9.9013e-01 3.1920e-03 weaklyHypometh 1.000000 0.2455381 insignificant 0.999048 0.00241586 weaklyHypometh 1 0.26843 insignificant -0.04705136 0.0200951 weaklyHypometh 1 insignificant 0.870527 0.7857807 0.0859030 12 0.888023 0.6947220 0.1933007 9.8196e-15 7.8986e-01 weaklyHypermeth 3.3861e-13 1.00000000 weaklyHypermeth 1.0455e-03 9.4941e-01 weaklyHypermeth 2.0909e-02 1.000000 weaklyHypermeth 0.0761318 2.9734e-01 insignificant 1.0000e+00 insignificant 0.870508 0.8647799 0.0119279 9 0.878691 0.870454 0.00823681 4.8367e-01 3.1210e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.6368e-01 2.4204e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.00424737 9.2024e-01 insignificant 1.0000000 insignificant 0.905877 0.7857807 1.1028e-01 12 0.917301 0.6947220 0.22257887 4.1129e-12 0.99995887 weaklyHypermeth 1.4182e-10 1.000000 weaklyHypermeth 7.8963e-06 0.99999939 weaklyHypermeth 2.8201e-04 1.000000 weaklyHypermeth 0.1231832 1.1348e-01 insignificant 1.0000e+00 insignificant 0.905831 0.8647799 0.0509035 9 0.910409 0.870454 0.03995481 1.0471e-02 4.2916e-01 weaklyHypermeth 2.2279e-01 1.00000000 insignificant 2.2970e-01 0.63548354 insignificant 1.0000e+00 1.000000 insignificant 4.2804e-02 3.1508e-01 insignificant 1.000000 insignificant 0.7861460 0.8647799 -0.0615547 9 0.7526155 0.870454 -0.11783897 8.4022e-01 4.1884e-05 weaklyHypometh 1.0000e+00 1.0739e-03 weaklyHypometh 9.0515e-01 1.2345e-03 weaklyHypometh 1.0000e+00 3.6309e-02 weaklyHypometh -0.0803792 3.1001e-01 insignificant 1.0000e+00 insignificant chr11 2823150 2824150 37760 ENSG00000218400 0.9471909 139 6 0.7543577 194 9 0.8638010 248 8 0.969945 151 3 0.916923 202 8 0.822632 174 6 0.8620019 296 8 0.939151 176 8 0.850320 230 8 0.920154 282 8 0.906171 314 10 0.856816 186 7 0.853589 314 8 0.944945 55 3 0.940507 211 8 0.912201 145 8 0.921915 186 8 0.699580 137 3 0.831552 219 8 0.917179 150 8 0.93120 142 8 0.7297173 61 3 0.938818 155 9 0.898381 130 7 0.980000 50 3 0.8833529 282 9 0.7657433 136 8 0.865855 138 6 0.841165 191 8 0.8598411 347 9 0.9519767 290 10 0.892544 213 8 0.8559525 303 10 0.624594 204 8 0.875817 97 3 0.8333333 38 3 0.892658 149 9 0.7922696 259 8 0.927589 121 6 0.9240716 143 7 0.895513 109 3 0.779122 115 4 0.992208 108 3 0.924508 0.7912886 0.861006 0.9170858 0.926733 0.887914 0.799515 0.889890 0.8081310 0.895881 0.849749 0.859120 0.8828707 0.948037 0.869994 0.928400 0.847146 0.861100 0.9395672 0.9509538 0.915554 0.861545 0.872829 0.9460533 0.940331 0.8955669 0.9101272 0.842198 0.911721 0.9091014 0.9189791 0.896988 0.9116099 0.740732 0.8724964 0.9811404 0.8784661 0.6809211 0.950952 0.9279547 0.9174820 0.9258454 0.9693819 3 0.881018 0.905386 -0.02229658 8 0.860572 0.838240 0.02233161 9.5818e-01 1.9326e-02 weaklyHypometh 1.000000 0.7807054 insignificant 0.791960 0.50551284 insignificant 1 1.00000 insignificant 0.00333059 0.8997820 insignificant 1 insignificant 0.881149 0.7657143 0.1178279 8 0.882686 0.7773574 0.1053287 8.9560e-06 1.0000e+00 weaklyHypermeth 1.4445e-04 1.00000000 weaklyHypermeth 2.2148e-02 9.4535e-01 weaklyHypermeth 2.5754e-01 1.000000 insignificant 0.0691092 1.5523e-01 insignificant 1.0000e+00 insignificant 0.881208 0.9177852 -0.0420223 4 0.893351 0.827745 0.06560640 8.5813e-01 3.5021e-03 lowCoverage 1.0000e+00 2.0601e-01 lowCoverage 9.4144e-01 1.3660e-02 lowCoverage 1.0000e+00 0.6609285 lowCoverage -0.02215418 5.8362e-01 lowCoverage 1.0000000 lowCoverage 0.905767 0.7657143 1.4084e-01 8 0.905888 0.7773574 0.12853077 2.3592e-08 0.99997722 weaklyHypermeth 6.3761e-07 1.000000 weaklyHypermeth 1.6253e-02 0.92145871 weaklyHypermeth 2.1108e-01 1.000000 insignificant 0.0657786 1.8639e-01 insignificant 1.0000e+00 insignificant 0.905811 0.9177852 -0.0134303 4 0.914444 0.827745 0.08669919 6.4986e-01 1.4411e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 9.2389e-01 0.04760700 lowCoverage 1.0000e+00 1.000000 lowCoverage -2.5485e-02 5.5236e-01 lowCoverage 1.000000 lowCoverage 0.7657143 0.9193277 -0.1401042 4 0.7773574 0.910519 -0.13316166 9.9984e-01 2.3145e-04 lowCoverage 1.0000e+00 4.6289e-03 lowCoverage 9.9868e-01 1.1542e-02 lowCoverage 1.0000e+00 1.8616e-01 lowCoverage -0.0912634 1.2076e-01 lowCoverage 1.0000e+00 lowCoverage chr11 3027250 3028250 37763 ENSG00000201616 0.7086277 193 5 0.7900528 246 5 0.5885772 174 6 0.899700 213 5 0.870481 137 5 0.648424 280 6 0.7277505 143 5 0.778963 207 5 0.734967 175 5 0.900645 175 5 0.854335 316 5 0.718254 98 6 0.479946 227 6 0.832524 130 5 0.800929 261 5 0.807692 72 5 1.000000 2 0 0.381266 214 5 0.642446 448 5 0.899975 169 5 0.94048 63 4 0.4942475 98 4 0.907740 190 5 0.929275 79 5 0.644156 51 4 0.8797020 253 5 0.8761807 170 4 0.625940 77 4 0.737530 351 5 0.7119367 371 5 0.7046405 287 6 0.863429 220 6 0.0000000 269 5 0.000000 150 5 0.000000 422 5 0.1250000 11 0 0.061678 325 6 0.0047619 322 6 0.735982 201 5 0.7254356 142 5 0.782759 168 5 0.682102 158 5 0.469915 138 5 0.900689 0.8154550 0.772078 0.9067981 0.875769 0.913798 0.926968 0.828234 0.8278558 0.916992 0.845614 0.714055 0.5279142 0.884367 0.857114 0.999502 0.923219 0.458118 0.7936567 0.8756265 0.923760 0.615189 0.958311 0.9597580 0.834531 0.8554198 0.8601676 0.881111 0.788453 0.7701584 0.7845007 0.887233 0.0000000 0.000000 0.0000000 0.1569579 0.0058561 0.0061489 0.753712 0.7562920 0.7899118 0.7413129 0.5145172 4 0.794845 0.833937 -0.02971614 5 0.680908 0.738191 -0.05728245 9.2707e-01 2.7440e-01 insignificant 1.000000 1.0000000 insignificant 0.798938 0.72186631 insignificant 1 1.00000 insignificant -0.02299331 0.6703766 lowCoverage 1 lowCoverage 0.794997 0.0040027 0.7919104 5 0.706752 0.0429865 0.6637657 8.6698e-53 1.0000e+00 hypermethylated 1.2385e-50 1.00000000 hypermethylated 2.1794e-13 1.0000e+00 hypermethylated 2.1794e-11 1.000000 hypermethylated 0.7213712 3.1575e-15 lowCoverage 1.5787e-12 lowCoverage 0.800470 0.7137546 0.0865509 5 0.763320 0.735492 0.02782745 6.2800e-04 9.2424e-01 weaklyHypermeth 2.0933e-02 1.0000e+00 weaklyHypermeth 4.6318e-04 9.9395e-01 weaklyHypermeth 2.7246e-02 1.0000000 weaklyHypermeth 0.07403925 2.8515e-01 lowCoverage 1.0000000 lowCoverage 0.834239 0.0040027 8.3118e-01 5 0.772218 0.0429865 0.72923131 4.0174e-48 1.00000000 hypermethylated 6.6957e-46 1.000000 hypermethylated 3.2887e-11 1.00000000 hypermethylated 2.9897e-09 1.000000 hypermethylated 0.7443645 6.2717e-11 lowCoverage 2.0906e-08 lowCoverage 0.835787 0.7137546 0.1034003 5 0.778372 0.735492 0.04287952 9.2776e-04 9.7309e-01 weaklyHypermeth 3.4361e-02 1.00000000 weaklyHypermeth 3.0938e-03 0.97948774 weaklyHypermeth 1.3451e-01 1.000000 insignificant 9.7033e-02 1.9161e-01 lowCoverage 1.000000 lowCoverage 0.0040733 0.7137546 -0.7107639 5 0.0501509 0.735492 -0.68534133 1.0000e+00 3.2268e-29 hypomethylated 1.0000e+00 6.4535e-27 hypomethylated 1.0000e+00 1.5659e-08 hypomethylated 1.0000e+00 1.9574e-06 hypomethylated -0.6473319 8.4925e-05 lowCoverage 1.0927e-02 lowCoverage chr11 3131950 3132950 37765 ENSG00000219934 0.7982448 496 9 0.6779416 604 10 0.6296812 211 10 0.874409 482 6 0.634360 188 10 0.872630 443 10 0.8530183 402 10 0.750406 305 10 0.844777 207 10 0.895048 160 10 0.836292 528 10 0.806197 113 10 0.777684 233 10 0.877778 90 6 0.821288 204 10 0.915035 104 10 0.769481 80 5 0.547120 485 8 0.767593 449 10 0.698360 295 10 0.81235 161 10 0.7509921 39 5 0.730658 213 10 0.838333 74 10 0.720973 80 6 0.8079931 564 9 0.8171627 123 8 0.709969 128 8 0.726301 420 10 0.8584523 582 9 0.6664241 510 9 0.858783 378 10 0.7161081 313 10 0.645425 436 10 0.595271 122 5 0.2142857 22 0 0.850541 259 10 0.6782627 605 10 0.550805 324 9 0.5515873 366 10 0.756979 406 6 0.675048 308 6 0.766660 271 6 0.806362 0.7590223 0.672354 0.8503498 0.710168 0.855902 0.849561 0.793099 0.7896758 0.884274 0.849169 0.778793 0.7933228 0.869548 0.780449 0.937258 0.821506 0.610476 0.8218273 0.7253792 0.757438 0.753365 0.746153 0.7949660 0.740695 0.8505145 0.8092242 0.731732 0.763500 0.8511348 0.7680478 0.853629 0.7586638 0.632620 0.6723010 0.4714624 0.8821778 0.6346982 0.647072 0.5018549 0.7389068 0.7126601 0.6888425 5 0.776407 0.803484 -0.02143911 9 0.768268 0.745332 0.02293611 9.6601e-01 2.6990e-01 insignificant 1.000000 1.0000000 insignificant 0.720530 0.76710084 insignificant 1 1.00000 insignificant 0.00750123 0.7986749 insignificant 1 insignificant 0.776205 0.7216847 0.0517230 10 0.684934 0.7447192 -0.0597848 3.2439e-04 5.5699e-01 weaklyHypermeth 4.0048e-03 1.00000000 weaklyHypermeth 2.2565e-02 8.3301e-01 weaklyHypermeth 2.5937e-01 1.000000 insignificant 0.1657181 1.2025e-01 insignificant 1.0000e+00 insignificant 0.776205 0.6244776 0.1501423 6 0.684934 0.671590 0.01334394 1.7690e-06 9.8468e-01 weaklyHypermeth 1.1793e-04 1.0000e+00 weaklyHypermeth 3.1737e-05 9.8739e-01 weaklyHypermeth 2.8852e-03 1.0000000 weaklyHypermeth 0.12215135 5.8673e-02 insignificant 0.8037353 insignificant 0.803364 0.7215262 6.5993e-02 9 0.722180 0.7215118 0.00066811 8.0860e-04 0.79636492 weaklyHypermeth 9.4024e-03 1.000000 weaklyHypermeth 3.8093e-02 0.71551615 weaklyHypermeth 3.5936e-01 1.000000 insignificant 0.1582169 1.3354e-01 insignificant 1.0000e+00 insignificant 0.803364 0.6246264 0.1672914 6 0.722180 0.687190 0.03499036 7.2941e-10 9.9994e-01 weaklyHypermeth 9.1176e-08 1.00000000 weaklyHypermeth 6.7992e-05 0.96624143 weaklyHypermeth 7.5546e-03 1.000000 weaklyHypermeth 1.1465e-01 7.0736e-02 insignificant 1.000000 insignificant 0.7216847 0.6244776 0.1187691 6 0.7447192 0.671590 0.07312873 7.4319e-03 6.5861e-01 weaklyHypermeth 4.9546e-01 1.0000e+00 insignificant 1.2849e-01 8.5373e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0435667 6.7460e-01 insignificant 1.0000e+00 insignificant chr11 3199050 3200050 37766 MRGPRG ENSG00000182170 0.8968405 418 15 0.8086069 485 15 0.8143766 435 15 0.854234 497 14 0.802845 286 15 0.895064 515 14 0.8822758 302 15 0.857813 505 15 0.824923 398 15 0.921866 442 15 0.841870 555 15 0.783488 266 15 0.878207 249 15 0.786111 58 5 0.500000 47 3 0.741456 192 10 0.741937 79 9 0.860548 619 14 0.860381 512 15 0.832426 423 15 0.87687 254 15 0.8784846 262 14 0.870716 427 15 0.900269 305 15 0.887453 227 14 0.8828403 473 15 0.8420111 183 15 0.850092 161 13 0.780303 219 14 0.8807199 572 15 0.9056059 528 15 0.933100 529 15 0.3863124 393 15 0.443499 269 15 0.602093 588 9 0.5321429 37 2 0.375779 484 15 0.4383716 424 15 0.873630 456 15 0.8718794 385 15 0.858439 396 14 0.857619 433 14 0.849921 487 14 0.899458 0.7943806 0.804268 0.8982142 0.767766 0.874220 0.868675 0.854740 0.8182438 0.874764 0.815562 0.737954 0.8518744 0.775985 0.683837 0.718309 0.683346 0.884191 0.8464701 0.8235156 0.878732 0.845680 0.823619 0.8697824 0.873008 0.8628370 0.8314491 0.892522 0.820000 0.8757865 0.8857981 0.936128 0.3743565 0.444703 0.5087451 0.5503055 0.4058063 0.4580071 0.866656 0.8760690 0.8550894 0.8399388 0.8641924 8 0.840450 0.875907 -0.03906437 15 0.868806 0.902355 -0.03354963 9.9991e-01 4.9470e-04 weaklyHypometh 1.000000 0.0672557 weaklyHypometh 0.999406 0.00382543 weaklyHypometh 1 0.34777 insignificant -0.05477544 0.0237140 weaklyHypometh 1 insignificant 0.840341 0.4487472 0.3675509 15 0.852406 0.4336055 0.4188009 9.9883e-79 9.9995e-01 hypermethylated 3.3294e-76 1.00000000 hypermethylated 1.0534e-15 1.0000e+00 hypermethylated 1.8445e-13 1.000000 hypermethylated 0.3562305 1.7935e-05 hypermethylated 1.0550e-03 hypermethylated 0.840319 0.8470097 -0.0154076 14 0.842567 0.865289 -0.02272196 3.8206e-02 8.2264e-03 weaklyHypometh 7.0751e-01 3.7393e-01 insignificant 9.6862e-02 7.7191e-03 weaklyHypometh 1.0000e+00 0.5146087 insignificant -0.04303436 4.9126e-02 weaklyHypometh 0.7159516 insignificant 0.875847 0.4487472 4.2184e-01 15 0.890150 0.4336055 0.45654428 7.4082e-70 1.00000000 hypermethylated 7.4082e-67 1.000000 hypermethylated 2.6037e-16 1.00000000 hypermethylated 6.5093e-14 1.000000 hypermethylated 0.4110059 3.6059e-05 hypermethylated 2.1211e-03 hypermethylated 0.875787 0.8470097 0.0217121 14 0.882826 0.865289 0.01753760 1.3413e-05 2.9977e-01 weaklyHypermeth 7.7002e-04 1.00000000 weaklyHypermeth 7.9317e-04 0.15661385 weaklyHypermeth 5.2878e-02 1.000000 weaklyHypermeth 1.1741e-02 3.3954e-01 insignificant 1.000000 insignificant 0.4487004 0.8470097 -0.3871434 14 0.4291793 0.865289 -0.43610963 1.0000e+00 2.6117e-39 hypomethylated 1.0000e+00 1.3058e-36 hypomethylated 1.0000e+00 2.2235e-11 hypomethylated 1.0000e+00 7.4117e-09 hypomethylated -0.3992648 8.7416e-05 hypomethylated 1.0927e-02 hypomethylated chr11 3232950 3233950 37767 MRGPRE ENSG00000184350 0.7508031 286 7 0.7488217 145 6 0.6468766 105 7 0.902446 154 8 0.747395 65 6 0.847717 236 8 0.7695680 103 6 0.734739 115 6 0.806699 80 6 0.903580 80 6 0.864087 253 9 0.810534 57 5 0.761267 107 8 0.734722 39 2 0.884061 89 5 0.681439 51 5 0.927273 28 2 0.898298 203 8 0.854751 120 6 0.574325 202 8 0.79992 98 6 0.8029564 89 7 0.893798 167 9 0.761780 93 6 0.719080 52 5 0.7790422 155 8 0.6176603 144 6 0.723853 78 5 0.834530 89 4 0.8123562 180 8 0.6959671 155 7 0.781486 247 8 0.6876915 109 6 0.760287 68 6 0.774661 176 8 0.8771368 37 3 0.754900 111 6 0.7649962 161 6 0.855039 225 8 0.8639680 214 7 0.893219 214 7 0.907601 191 7 0.826531 240 9 0.787451 0.7995072 0.752267 0.9413981 0.827891 0.797650 0.874633 0.836482 0.7487172 0.910616 0.858084 0.826132 0.8471987 0.866583 0.897730 0.835670 0.850175 0.886842 0.8530657 0.8147989 0.829263 0.872197 0.885243 0.8675473 0.802700 0.8692736 0.7996461 0.798986 0.845321 0.8332936 0.7984618 0.830593 0.7224194 0.668421 0.8110199 0.8579655 0.8116227 0.8239764 0.879905 0.8615105 0.8981353 0.8813243 0.8953686 4 0.831612 0.831709 -0.00145458 8 0.661387 0.760840 -0.09945346 7.4874e-01 7.6544e-01 insignificant 1.000000 1.0000000 insignificant 0.590282 0.56355919 insignificant 1 1.00000 insignificant 0.02393465 0.4260080 insignificant 1 insignificant 0.833134 0.7776097 0.0561070 7 0.743664 0.7870460 -0.0433820 9.5154e-03 9.9670e-01 weaklyHypermeth 8.4207e-02 1.00000000 weaklyHypermeth 7.3818e-02 8.9899e-01 insignificant 6.5891e-01 1.000000 insignificant 0.0225247 5.0266e-01 insignificant 1.0000e+00 insignificant 0.833466 0.8985240 -0.0412253 6 0.826293 0.849388 -0.02309512 9.5695e-01 3.6962e-02 weaklyHypometh 1.0000e+00 9.4775e-01 insignificant 9.9486e-01 5.8389e-02 insignificant 1.0000e+00 1.0000000 insignificant -0.07680155 6.8851e-03 weaklyHypometh 0.2151608 insignificant 0.831599 0.7764350 5.5759e-02 7 0.739098 0.7154964 0.02360196 1.9942e-02 0.95635017 weaklyHypermeth 1.6900e-01 1.000000 insignificant 2.1885e-01 0.88352049 insignificant 1.0000e+00 1.000000 insignificant -0.0014099 9.6606e-01 insignificant 1.0000e+00 insignificant 0.833007 0.8985240 -0.0408018 6 0.810750 0.849388 -0.03863866 9.6508e-01 1.2371e-02 weaklyHypometh 1.0000e+00 0.58909329 insignificant 9.8036e-01 0.02244421 weaklyHypometh 1.0000e+00 1.000000 insignificant -1.0074e-01 1.2086e-03 weaklyHypometh 0.107542 insignificant 0.7772727 0.8985240 -0.1027737 5 0.7633844 0.849388 -0.08600402 9.8734e-01 7.6033e-05 weaklyHypometh 1.0000e+00 1.7682e-03 weaklyHypometh 9.9653e-01 1.9164e-03 weaklyHypometh 1.0000e+00 5.1796e-02 weaklyHypometh -0.0993263 8.9782e-03 weaklyHypometh 2.3073e-01 insignificant chr11 3278750 3279750 37771 ENSG00000220904 0.8751231 194 7 0.7512266 100 7 0.7185185 100 8 0.923949 133 6 0.757407 67 7 0.813762 295 9 0.7800537 114 8 0.800313 74 7 0.701389 56 7 0.902869 87 8 0.852177 181 8 0.775595 61 6 0.838553 65 6 0.933333 10 1 0.888327 118 6 0.706642 76 6 0.819444 44 5 0.635729 127 6 0.772116 127 7 0.691293 263 9 0.75559 118 8 0.8028490 81 8 0.710448 106 7 0.755331 72 7 0.753472 63 7 0.5666859 128 8 0.6925388 129 8 0.746131 74 5 0.735294 75 5 0.8032407 139 8 0.8446558 145 8 0.682002 336 8 0.8459707 55 5 0.700253 63 6 0.875196 150 8 0.7677339 87 6 0.641554 136 7 0.6871528 101 5 0.714473 238 8 0.7409766 200 6 0.836081 165 7 0.880994 191 6 0.878454 159 6 0.881273 0.8239408 0.742986 0.9013581 0.802790 0.819166 0.767942 0.727668 0.7141780 0.873281 0.853243 0.857816 0.8114763 0.837435 0.847700 0.705570 0.826864 0.812272 0.8207668 0.8971888 0.703180 0.828634 0.756185 0.7554162 0.767345 0.7840695 0.8465727 0.855887 0.838612 0.7749183 0.8472097 0.812284 0.7974997 0.724068 0.8424009 0.8297901 0.7799638 0.6957014 0.787474 0.8383875 0.8040492 0.8466155 0.8804959 4 0.830279 0.795904 0.02597682 8 0.666172 0.630504 0.03566859 3.9683e-02 7.6726e-01 weaklyHypermeth 1.000000 1.0000000 insignificant 0.041602 0.78377011 weaklyHypermeth 1 1.00000 insignificant 0.05953786 0.0414770 weaklyHypermeth 1 insignificant 0.830271 0.7969543 0.0301551 8 0.650931 0.7365678 -0.0856370 3.3296e-01 9.6940e-01 insignificant 1.0000e+00 1.00000000 insignificant 3.7099e-01 9.4466e-01 insignificant 1.0000e+00 1.000000 insignificant 0.0439144 3.3139e-01 insignificant 1.0000e+00 insignificant 0.830998 0.8289612 0.0015322 7 0.795582 0.766275 0.02930737 5.5673e-02 6.9109e-01 insignificant 9.2789e-01 1.0000e+00 insignificant 5.1537e-01 6.0670e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.01330465 7.4693e-01 insignificant 1.0000000 insignificant 0.796715 0.7956081 -4.0401e-04 8 0.641379 0.6751871 -0.03380821 4.4016e-01 0.39697120 insignificant 1.0000e+00 1.000000 insignificant 5.7936e-01 0.67630890 insignificant 1.0000e+00 1.000000 insignificant -0.0156235 7.2711e-01 insignificant 1.0000e+00 insignificant 0.797938 0.8289612 -0.0217575 7 0.771839 0.766275 0.00556385 6.6412e-01 2.9883e-01 insignificant 1.0000e+00 1.00000000 insignificant 9.7109e-01 0.16769908 insignificant 1.0000e+00 1.000000 insignificant -7.2843e-02 1.1520e-01 insignificant 1.000000 insignificant 0.7989779 0.8289612 -0.0330108 7 0.7891384 0.766275 0.02286368 4.8407e-01 1.6206e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.7025e-01 4.0026e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0572190 2.9595e-01 insignificant 1.0000e+00 insignificant chr11 3780550 3781550 37781 PGAP2 ENSG00000148985 0.8342070 267 9 0.7802813 117 8 0.7220588 121 8 0.842746 145 10 0.814297 59 6 0.802230 326 9 0.9094665 82 8 0.740941 156 8 0.740027 103 9 0.877066 99 8 0.813719 238 9 0.787582 97 8 0.762358 137 9 0.800000 25 3 0.776948 131 8 0.861111 63 5 0.813636 84 5 0.783604 164 8 0.785518 150 10 0.755533 204 9 0.74056 59 6 0.6779720 97 9 0.757214 171 9 0.527778 61 8 0.836111 54 7 0.8104780 170 8 0.8318939 79 7 0.793939 40 4 0.778669 115 10 0.7816851 174 10 0.7649966 176 9 0.728236 301 9 0.7309219 166 10 0.561469 124 8 0.625078 178 8 0.7904762 64 8 0.814650 106 8 0.6976562 141 8 0.849540 262 8 0.8798306 232 8 0.852625 182 8 0.895455 186 8 0.832818 197 8 0.809606 0.7653397 0.662373 0.8154502 0.785477 0.826497 0.905312 0.775738 0.7314409 0.840361 0.818502 0.751076 0.7253665 0.772329 0.761154 0.873154 0.843882 0.776805 0.7830881 0.8498957 0.834271 0.756752 0.757290 0.6435654 0.835970 0.7945303 0.8121244 0.765823 0.763824 0.7950613 0.7549191 0.751742 0.7145420 0.612235 0.6830713 0.7899923 0.8046859 0.7255525 0.818679 0.8766429 0.8241166 0.9036792 0.8000153 3 0.795882 0.768203 0.02964571 8 0.791060 0.671721 0.11933967 3.6752e-02 9.9891e-01 weaklyHypermeth 1.000000 1.0000000 insignificant 0.048273 0.99868665 weaklyHypermeth 1 1.00000 insignificant 0.04770574 0.0902358 insignificant 1 insignificant 0.796095 0.7150193 0.0788919 8 0.817521 0.7448952 0.0726253 2.8763e-05 9.9996e-01 weaklyHypermeth 4.1691e-04 1.00000000 weaklyHypermeth 1.7905e-03 9.9923e-01 weaklyHypermeth 3.3784e-02 1.000000 weaklyHypermeth 0.0967913 5.8119e-02 insignificant 7.8539e-01 insignificant 0.795734 0.8375826 -0.0470436 8 0.772066 0.875021 -0.10295529 9.9984e-01 2.0153e-03 weaklyHypometh 1.0000e+00 1.5632e-01 insignificant 9.9979e-01 1.0088e-02 weaklyHypometh 1.0000e+00 0.5604654 insignificant -0.06188732 1.7010e-03 weaklyHypometh 0.0973039 weaklyHypometh 0.768717 0.7150193 5.1667e-02 9 0.732786 0.7448952 -0.01210890 3.2425e-03 0.93728763 weaklyHypermeth 3.1789e-02 1.000000 weaklyHypermeth 1.8549e-02 0.96517603 weaklyHypermeth 2.2901e-01 1.000000 insignificant 0.0490855 3.1781e-01 insignificant 1.0000e+00 insignificant 0.768562 0.8375826 -0.0731806 8 0.687332 0.875021 -0.18768947 1.0000e+00 1.6990e-06 weaklyHypometh 1.0000e+00 0.00042474 weaklyHypometh 9.9977e-01 0.00024899 weaklyHypometh 1.0000e+00 0.080622 weaklyHypometh -1.0959e-01 9.8859e-04 weaklyHypometh 0.107542 insignificant 0.7142857 0.8374291 -0.1199887 8 0.7193848 0.862523 -0.14313863 1.0000e+00 1.7587e-06 weaklyHypometh 1.0000e+00 5.4959e-05 weaklyHypometh 1.0000e+00 7.7833e-05 weaklyHypometh 1.0000e+00 4.0965e-03 weaklyHypometh -0.1586786 8.9985e-03 weaklyHypometh 2.3073e-01 insignificant chr11 5599250 5600250 37818 TRIM6 ENSG00000121236 0.8749478 132 6 0.8727273 32 3 0.8793561 91 3 0.911168 68 5 0.917284 60 3 0.812554 152 6 0.8805132 85 3 0.791126 29 2 0.897778 53 3 0.845238 29 2 0.914076 80 3 1.000000 28 2 0.915012 70 3 NA 0 0 0.943295 60 3 0.925926 18 2 0.781783 793 6 0.763348 82 6 0.955128 84 3 0.888766 299 5 0.85236 51 3 0.9047619 17 2 0.759259 54 3 0.842857 46 3 0.900000 12 2 0.7160647 57 6 0.9280303 48 3 0.977778 36 3 0.879917 49 3 0.8356307 69 6 0.8161477 94 6 0.825025 173 6 0.8916667 51 3 0.803160 68 3 0.838612 34 2 0.8968254 15 2 0.823529 48 3 0.7503996 107 6 0.856846 123 5 0.8752315 114 6 0.842722 104 5 0.797619 39 2 0.777846 200 5 0.785376 0.8201774 0.872388 0.8494934 0.882023 0.888217 0.896464 0.801988 0.8507317 0.783101 0.904257 1.000000 0.8788261 NA 0.919008 0.888889 0.899146 0.749710 0.9692777 0.8514891 0.836462 0.857143 0.835269 0.8163182 0.894532 0.8977447 0.8996674 0.966667 0.882594 0.8398690 0.8816046 0.866083 0.8496951 0.853374 0.7766803 0.8554007 0.7532281 0.8170732 0.876887 0.9512195 0.8475610 0.8928571 0.8378151 2 0.893494 0.852691 0.03908848 3 0.894169 0.811421 0.08274818 3.2967e-03 9.9854e-01 lowCoverage 1.000000 1.0000000 lowCoverage 0.129797 0.97378695 lowCoverage 1 1.00000 lowCoverage 0.02948063 0.2535673 lowCoverage 1 lowCoverage 0.893494 0.8111455 0.0792483 3 0.894169 0.7330982 0.1610708 1.5330e-06 9.5319e-01 lowCoverage 2.7872e-05 1.00000000 lowCoverage 2.6717e-02 8.6540e-01 lowCoverage 2.9040e-01 1.000000 lowCoverage 0.0486008 1.0067e-01 lowCoverage 1.0000e+00 lowCoverage 0.893494 0.8500000 0.0466822 5 0.894169 0.839303 0.05486579 7.8854e-03 9.9217e-01 weaklyHypermeth 2.0841e-01 1.0000e+00 insignificant 2.3621e-01 8.2954e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.05258010 4.7668e-02 lowCoverage 0.7159516 lowCoverage 0.852691 0.8111455 5.3971e-02 3 0.811421 0.7330982 0.07832258 2.1652e-03 0.84151961 lowCoverage 2.3034e-02 1.000000 lowCoverage 2.5278e-02 0.64300711 lowCoverage 2.8213e-01 1.000000 lowCoverage 0.0191201 5.4432e-01 lowCoverage 1.0000e+00 lowCoverage 0.852691 0.8500000 -0.0105568 2 0.811421 0.839303 -0.02788239 8.7433e-01 2.8829e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 9.2751e-01 0.46146767 lowCoverage 1.0000e+00 1.000000 lowCoverage 2.3099e-02 4.1891e-01 lowCoverage 1.000000 lowCoverage 0.8111455 0.8500000 -0.0572275 2 0.7330982 0.839303 -0.10620497 7.1459e-01 1.8234e-03 lowCoverage 1.0000e+00 2.5326e-02 lowCoverage 7.8656e-01 5.6560e-02 lowCoverage 1.0000e+00 6.1478e-01 lowCoverage 0.0039793 8.9424e-01 lowCoverage 1.0000e+00 lowCoverage chr11 6228450 6229450 37822 CNGA4 ENSG00000132259 0.8844799 487 15 0.8213203 147 9 0.8298091 119 10 0.849886 345 15 0.863636 57 7 0.719309 457 14 0.8628042 74 7 0.867407 108 8 0.828704 86 5 0.898567 87 6 0.834825 277 10 0.793750 69 7 0.809437 90 10 NA 0 0 0.916583 88 8 0.854242 49 3 0.644643 60 5 0.909707 461 15 0.772059 170 14 0.766064 315 14 0.91837 43 4 0.9011459 163 10 0.828629 279 15 0.852083 83 8 0.930272 108 12 0.8618493 264 14 0.8961310 73 6 0.855714 38 4 0.780905 120 8 0.8448534 221 14 0.7848738 193 14 0.869313 487 14 0.7339710 119 9 0.857341 146 10 0.693304 278 14 0.8907861 70 8 0.813737 76 8 0.7182008 181 13 0.865645 356 15 0.9316150 501 15 0.879242 382 15 0.916433 347 15 0.887185 404 15 0.879361 0.8681261 0.857730 0.9086685 0.874346 0.823006 0.891756 0.873638 0.8732979 0.920145 0.877647 0.727083 0.9140332 NA 0.947792 0.829768 0.851144 0.915405 0.8960224 0.8561958 0.856913 0.837848 0.882374 0.8913399 0.941667 0.8680490 0.8785632 0.805532 0.781518 0.9158178 0.8907648 0.890643 0.7834494 0.858166 0.7661081 0.9040212 0.8286091 0.7838249 0.897986 0.9174172 0.9146896 0.9404799 0.9344009 3 0.857586 0.854730 -0.00348495 12 0.771849 0.866476 -0.09462678 8.3840e-01 6.1472e-01 insignificant 1.000000 1.0000000 insignificant 0.986593 0.18595872 insignificant 1 1.00000 insignificant -0.03259562 0.1253031 insignificant 1 insignificant 0.858030 0.8000000 0.0587763 13 0.841429 0.7575739 0.0838550 3.9305e-05 1.0000e+00 weaklyHypermeth 5.3843e-04 1.00000000 weaklyHypermeth 5.0512e-02 9.9494e-01 insignificant 4.8415e-01 1.000000 insignificant 0.0431926 2.7325e-01 insignificant 1.0000e+00 insignificant 0.858030 0.9241206 -0.0526460 14 0.841429 0.900543 -0.05911431 9.9999e-01 5.6406e-04 weaklyHypometh 1.0000e+00 7.0508e-02 weaklyHypometh 9.9515e-01 9.7722e-03 weaklyHypometh 1.0000e+00 0.5604654 insignificant -0.06827490 2.8814e-03 weaklyHypometh 0.1129664 insignificant 0.854519 0.8000000 6.1837e-02 12 0.848673 0.7575739 0.09109863 3.6445e-04 0.99993829 weaklyHypermeth 4.6724e-03 1.000000 weaklyHypermeth 2.2437e-02 0.99958272 weaklyHypermeth 2.6089e-01 1.000000 insignificant 0.0757882 7.3017e-02 insignificant 8.2041e-01 insignificant 0.854519 0.9241206 -0.0479802 12 0.848673 0.900543 -0.05187063 9.9994e-01 8.4647e-04 weaklyHypometh 1.0000e+00 0.07695170 weaklyHypometh 8.5863e-01 0.26304081 insignificant 1.0000e+00 1.000000 insignificant -3.5679e-02 7.3200e-02 insignificant 1.000000 insignificant 0.8000000 0.9241206 -0.1083395 13 0.7575739 0.900543 -0.14296927 1.0000e+00 4.3741e-09 weaklyHypometh 1.0000e+00 2.0829e-07 weaklyHypometh 1.0000e+00 6.3976e-04 weaklyHypometh 1.0000e+00 2.2061e-02 weaklyHypometh -0.1114675 1.8138e-02 weaklyHypometh 3.4223e-01 insignificant chr11 8139450 8140450 37838 RIC3 ENSG00000166405 0.8680055 413 7 0.8508097 272 7 0.6507501 315 7 0.932394 123 7 0.960645 126 7 0.921159 309 7 0.9193670 196 7 0.907164 200 7 0.915334 216 7 0.925075 182 7 0.931950 229 7 0.857741 117 7 0.955853 219 7 NA 0 0 0.870042 185 7 0.858721 108 7 0.740385 96 7 0.727143 204 7 0.934865 162 6 0.952731 349 7 0.97403 61 5 0.8351474 61 6 0.933480 214 7 0.884508 71 6 0.785613 50 6 0.9422179 247 7 0.8434703 85 7 0.876633 92 7 0.899753 185 7 0.9466721 334 7 0.9629598 225 7 0.926574 426 7 0.6217148 231 7 0.351741 102 6 0.969697 36 3 0.6607143 33 2 0.763545 160 7 0.7462001 262 7 0.949070 322 7 0.8768706 333 7 0.929882 221 7 0.909180 299 7 0.837609 248 7 0.866511 0.8336635 0.652699 0.9197903 0.968593 0.933008 0.920341 0.908060 0.9066377 0.923650 0.924625 0.868354 0.9527055 NA 0.858679 0.874346 0.734488 0.721594 0.9215221 0.9493383 0.956044 0.875946 0.941972 0.8774739 0.786163 0.9329109 0.8195499 0.878922 0.898494 0.9529707 0.9588575 0.934080 0.6290679 0.323622 0.7579558 0.6709402 0.7635870 0.7713593 0.959744 0.8743898 0.9488164 0.9050262 0.8362052 6 0.873166 0.923940 -0.05058775 7 0.875136 0.921955 -0.04681902 9.9993e-01 1.2271e-03 weaklyHypometh 1.000000 0.1363466 insignificant 0.990995 0.07959956 insignificant 1 1.00000 insignificant -0.02301927 0.3771125 insignificant 1 insignificant 0.873166 0.6893204 0.1857759 7 0.875136 0.6644227 0.2107137 5.3293e-15 1.0000e+00 weaklyHypermeth 1.9033e-13 1.00000000 weaklyHypermeth 1.0600e-07 1.0000e+00 weaklyHypermeth 4.8180e-06 1.000000 weaklyHypermeth 0.1923000 6.8387e-02 insignificant 8.8179e-01 insignificant 0.873166 0.9079410 -0.0303097 7 0.875136 0.899738 -0.02460158 7.8540e-01 1.2943e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.5498e-01 1.4337e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.02262034 4.3050e-01 insignificant 1.0000000 insignificant 0.923940 0.6893204 2.3715e-01 7 0.921955 0.6644227 0.25753272 3.4210e-18 1.00000000 hypermethylated 1.9006e-16 1.000000 hypermethylated 1.2910e-08 0.99999999 hypermethylated 9.2217e-07 1.000000 hypermethylated 0.2153193 4.8105e-02 weaklyHypermeth 6.1922e-01 insignificant 0.923940 0.9079410 0.0223713 7 0.921955 0.899738 0.02221744 9.6105e-02 7.6027e-01 insignificant 1.0000e+00 1.00000000 insignificant 3.5391e-01 0.77568823 insignificant 1.0000e+00 1.000000 insignificant 3.9893e-04 9.8798e-01 insignificant 1.000000 insignificant 0.6893204 0.9079410 -0.2170604 7 0.6644227 0.899738 -0.23531528 1.0000e+00 3.8568e-08 hypomethylated 1.0000e+00 1.5427e-06 hypomethylated 9.9991e-01 3.7350e-05 hypomethylated 1.0000e+00 2.1971e-03 hypomethylated -0.2149203 4.8421e-02 weaklyHypometh 7.1207e-01 insignificant chr11 9333050 9334050 37861 TMEM41B ENSG00000166471 0.8310601 302 8 0.7933313 133 8 0.7003493 117 8 0.696412 162 8 0.551389 75 7 0.684600 331 8 0.4460514 109 7 0.656279 123 8 0.640407 106 7 0.651721 88 8 0.583991 277 10 0.505093 85 7 0.644698 136 9 0.541667 25 1 0.712529 115 8 0.460714 67 7 0.669192 87 7 0.788673 173 8 0.564691 218 10 0.561043 271 8 0.74206 89 6 0.5960623 81 4 0.664821 139 8 0.751526 72 6 0.836397 91 8 0.7565462 213 8 0.6175793 81 4 0.650390 63 7 0.551806 128 6 0.6626388 173 8 0.6520737 182 8 0.742641 268 8 0.7907784 134 8 0.669146 110 10 0.648185 134 8 0.7690476 49 5 0.764311 127 8 0.7663805 198 6 0.754040 191 8 0.8690805 247 8 0.826351 195 8 0.838405 210 8 0.811758 262 8 0.865104 0.8383609 0.834993 0.8266860 0.774811 0.822827 0.649137 0.839461 0.8110863 0.826005 0.757630 0.723954 0.8236619 0.838644 0.861275 0.665395 0.888356 0.782984 0.7711938 0.8191146 0.861243 0.790089 0.827106 0.8481696 0.858684 0.8211546 0.7738731 0.797759 0.884407 0.8521062 0.8605755 0.857553 0.7939685 0.836251 0.7153824 0.8108315 0.8572431 0.7854450 0.798540 0.8792724 0.8605841 0.8853045 0.8518421 3 0.734578 0.812025 -0.03452462 8 0.571006 0.661341 -0.09033487 9.9443e-01 4.9106e-04 weaklyHypometh 1.000000 0.0672557 weaklyHypometh 0.998866 0.04837468 weaklyHypometh 1 1.00000 insignificant -0.05118398 0.1374153 insignificant 1 insignificant 0.734578 0.7672872 0.0095844 8 0.571006 0.6827441 -0.1117384 7.4830e-01 2.8000e-01 insignificant 1.0000e+00 1.00000000 insignificant 9.5818e-01 2.3901e-01 insignificant 1.0000e+00 1.000000 insignificant -0.1004470 1.0023e-02 weaklyHypometh 2.0147e-01 insignificant 0.801752 0.8461538 -0.0503516 8 0.687319 0.841024 -0.15370464 9.9952e-01 1.7288e-02 weaklyHypometh 1.0000e+00 5.4025e-01 insignificant 9.9867e-01 1.1030e-02 weaklyHypometh 1.0000e+00 0.5805364 insignificant -0.18573228 1.0755e-05 weaklyHypometh 0.0053777 weaklyHypometh 0.812025 0.7672872 4.4359e-02 8 0.661341 0.6827441 -0.02140349 4.4845e-02 0.81970734 weaklyHypermeth 3.5311e-01 1.000000 insignificant 2.9294e-01 0.91619237 insignificant 1.0000e+00 1.000000 insignificant -0.0492630 1.6922e-01 insignificant 1.0000e+00 insignificant 0.832136 0.8460145 -0.0141688 8 0.804182 0.821152 -0.01696976 9.2572e-01 2.7363e-01 insignificant 1.0000e+00 1.00000000 insignificant 9.0570e-01 0.42644039 insignificant 1.0000e+00 1.000000 insignificant -1.3455e-01 5.5374e-04 weaklyHypometh 0.087718 weaklyHypometh 0.7857143 0.8460145 -0.0602011 8 0.7616162 0.821152 -0.05953559 9.9539e-01 6.1180e-03 weaklyHypometh 1.0000e+00 7.1977e-02 weaklyHypometh 9.9454e-01 1.7887e-02 weaklyHypometh 1.0000e+00 2.5923e-01 insignificant -0.0852853 2.2770e-02 weaklyHypometh 4.1287e-01 insignificant chr11 9342150 9343150 37863 TMEM41B ENSG00000166471 0.0698675 924 24 0.0071624 1032 30 0.0083427 1144 25 0.037192 901 24 0.039500 528 26 0.042695 1282 30 0.0086111 1463 30 0.038644 1016 30 0.012644 1625 30 0.012361 1869 30 0.014494 1096 30 0.013068 1299 27 0.078270 1078 27 0.016996 747 12 0.015928 1819 30 0.015131 1924 30 0.022608 1048 28 0.035849 1118 29 0.026381 826 30 0.094422 921 24 0.08179 333 21 0.0071877 602 20 0.008543 822 30 0.010303 531 27 0.049030 507 18 0.0354076 1560 30 0.0037987 920 27 0.013894 547 28 0.032222 813 30 0.0061646 1741 30 0.0091853 1297 30 0.011914 1216 29 0.0061658 835 30 0.000000 489 24 0.050000 406 7 0.0062696 247 22 0.016086 500 26 0.0388319 987 30 0.010722 1171 24 0.0039176 1096 28 0.013329 891 23 0.045000 822 24 0.038075 1026 24 0.015357 0.0083498 0.010756 0.0077128 0.022502 0.017773 0.016453 0.010004 0.0084833 0.021898 0.019191 0.019876 0.0183676 0.016974 0.016837 0.023794 0.018952 0.006669 0.0070035 0.0239705 0.043343 0.009087 0.012176 0.0079946 0.019656 0.0049643 0.0077172 0.013413 0.040443 0.0043862 0.0098554 0.014089 0.0033990 0.000000 0.0048849 0.0028753 0.0178709 0.0030385 0.011663 0.0044169 0.0064195 0.0059724 0.0057576 19 0.013736 0.011755 0.00228272 30 0.021239 0.026893 -0.00565421 4.9295e-01 9.8164e-01 insignificant 1.000000 1.0000000 insignificant 0.178972 0.99969283 insignificant 1 1.00000 insignificant 0.00805500 0.3663590 insignificant 1 insignificant 0.013742 0.0066397 0.0071936 29 0.024362 0.0220891 0.0022734 1.4867e-03 9.7290e-01 weaklyHypermeth 1.5816e-02 1.00000000 weaklyHypermeth 9.3045e-05 1.0000e+00 weaklyHypermeth 2.3858e-03 1.000000 weaklyHypermeth 0.0109495 2.9722e-01 insignificant 1.0000e+00 insignificant 0.013425 0.0067918 0.0064843 24 0.012127 0.042848 -0.03072122 2.9912e-02 9.9744e-01 weaklyHypermeth 6.1242e-01 1.0000e+00 insignificant 1.7935e-02 9.9341e-01 weaklyHypermeth 5.4349e-01 1.0000000 insignificant 0.00829951 4.2241e-01 insignificant 1.0000000 insignificant 0.011519 0.0066397 4.6912e-03 29 0.014917 0.0220891 -0.00717225 3.3227e-02 0.82404856 weaklyHypermeth 2.7014e-01 1.000000 insignificant 4.9887e-02 0.99975268 weaklyHypermeth 4.3761e-01 1.000000 insignificant 0.0028945 7.9112e-01 insignificant 1.0000e+00 insignificant 0.011390 0.0067918 0.0045948 24 0.010431 0.042848 -0.03241783 2.2571e-01 9.6817e-01 insignificant 1.0000e+00 1.00000000 insignificant 3.6021e-01 0.96500221 insignificant 1.0000e+00 1.000000 insignificant 2.4451e-04 9.8200e-01 insignificant 1.000000 insignificant 0.0057904 0.0065934 -0.0029215 24 0.0083676 0.010943 -0.00257575 9.9649e-01 3.8286e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9999e-01 5.8968e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0026499 8.2417e-01 insignificant 1.0000e+00 insignificant chr11 9376550 9377550 37864 IPO7 ENSG00000205339 0.6671140 200 5 0.6969239 165 5 0.5587253 108 5 0.703307 119 5 0.766624 74 5 0.526075 364 5 0.6610725 116 5 0.743156 120 5 0.595705 81 5 0.689465 88 5 0.731271 198 5 0.704167 47 4 0.710788 141 5 0.666667 18 2 0.675926 95 5 0.775000 41 4 0.609832 73 4 0.750247 147 5 0.508278 142 5 0.677782 244 5 0.72448 70 5 0.5788058 91 5 0.548330 131 5 0.742593 91 5 0.779321 56 5 0.5382336 142 5 0.6026599 70 5 0.697265 65 5 0.637002 122 5 0.7730159 148 5 0.7463032 153 5 0.685555 351 5 0.5868534 114 5 0.546573 79 5 0.685275 109 5 0.8118421 33 3 0.705476 85 5 0.6992408 160 5 0.567582 170 5 0.5937494 164 5 0.754189 154 5 0.722275 155 5 0.683456 179 5 0.708450 0.6797340 0.598944 0.6993166 0.744966 0.680632 0.709502 0.673600 0.6243424 0.752140 0.722144 0.710345 0.7025026 0.702414 0.655086 0.799532 0.669760 0.744118 0.7408065 0.7260584 0.662272 0.613525 0.700316 0.7864124 0.807738 0.7025373 0.6534786 0.758764 0.697014 0.7244509 0.7155126 0.711610 0.6289942 0.594084 0.6910703 0.7813473 0.7407329 0.7312275 0.736493 0.7699452 0.7353027 0.7573938 0.7308102 5 0.709028 0.712752 -0.00120340 5 0.691928 0.673590 0.01833810 6.5208e-01 6.7364e-01 insignificant 1.000000 1.0000000 insignificant 0.790119 0.60165801 insignificant 1 1.00000 insignificant -0.00022421 0.9941798 lowCoverage 1 lowCoverage 0.708757 0.7017241 0.0192367 5 0.664255 0.6611393 0.0031154 2.7331e-01 5.4743e-01 insignificant 1.0000e+00 1.00000000 insignificant 5.9151e-01 4.5685e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0016372 9.7007e-01 lowCoverage 1.0000e+00 lowCoverage 0.709028 0.7688564 -0.0392590 5 0.691928 0.587396 0.10453197 8.3754e-01 1.2312e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.9928e-01 2.1652e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.00665609 8.7321e-01 lowCoverage 1.0000000 lowCoverage 0.713220 0.7017241 1.9325e-02 5 0.665753 0.6611393 0.00461376 3.4847e-01 0.67045829 insignificant 1.0000e+00 1.000000 insignificant 4.9968e-01 0.61307060 insignificant 1.0000e+00 1.000000 insignificant -0.0014130 9.7616e-01 lowCoverage 1.0000e+00 lowCoverage 0.712752 0.7688564 -0.0394380 5 0.673590 0.587396 0.08619387 8.2104e-01 1.2808e-01 insignificant 1.0000e+00 1.00000000 insignificant 7.6347e-01 0.30052698 insignificant 1.0000e+00 1.000000 insignificant 6.8803e-03 8.7971e-01 insignificant 1.000000 insignificant 0.7017241 0.7714988 -0.0625812 5 0.6611393 0.708069 -0.04692935 9.4752e-01 6.9952e-02 insignificant 1.0000e+00 5.6871e-01 insignificant 8.0539e-01 2.1963e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0082933 8.7877e-01 lowCoverage 1.0000e+00 lowCoverage chr11 9582750 9583750 37873 ENSG00000209446,ENSG00000222388 0.7969624 109 5 0.8405885 120 5 0.3857143 25 3 0.800559 119 5 0.753788 27 3 0.736111 99 5 0.6122549 55 3 0.720000 58 5 0.726667 28 5 0.880000 17 3 0.737660 132 5 0.500000 6 0 0.664583 52 3 0.791111 32 3 0.823810 23 3 0.866667 15 3 0.666667 3 0 0.317128 95 3 0.690476 48 3 0.745595 60 5 0.73333 19 0 0.7666667 12 0 0.737655 56 3 0.800000 34 3 0.653656 94 5 0.8037594 84 5 0.7733333 16 1 0.666667 13 0 0.733707 76 5 0.7627329 90 5 0.7943511 95 5 0.674632 86 5 0.7198148 94 5 0.700000 40 5 0.848485 76 5 0.6000000 14 0 0.596131 56 4 0.7984314 82 5 0.794624 101 5 0.7954286 117 5 0.845114 103 5 0.717949 39 3 0.768000 131 5 0.674875 0.7583592 0.480867 0.7445219 0.766268 0.673280 0.572851 0.541667 0.6244048 0.785714 0.648051 0.505513 0.6662946 0.656746 0.685374 0.871584 0.728727 0.631298 0.6109694 0.6324405 0.642857 0.821429 0.581750 0.6785714 0.604383 0.7066327 0.6250000 0.672619 0.557372 0.6768615 0.6110528 0.604976 0.5782407 0.542411 0.6915584 0.6651786 0.5307717 0.7006303 0.664075 0.7153061 0.7574312 0.7436388 0.7424451 0 0.695807 0.704309 0.02450678 5 0.730372 0.776169 -0.04579739 3.1192e-01 5.4624e-01 insignificant 1.000000 1.0000000 insignificant 0.728712 0.23986112 insignificant 1 1.00000 insignificant -0.03889070 0.3001434 lowCoverage 1 lowCoverage 0.695536 0.7237569 0.0200466 5 0.702594 0.7083322 -0.0057384 2.7953e-01 4.4012e-01 insignificant 1.0000e+00 1.00000000 insignificant 5.0211e-01 5.5642e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0076599 8.8857e-01 lowCoverage 1.0000e+00 lowCoverage 0.695536 0.7678208 -0.0447620 5 0.702594 0.821869 -0.11927543 9.0107e-01 5.2585e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3099e-01 1.1667e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.08140589 5.1241e-02 lowCoverage 0.7320079 lowCoverage 0.703869 0.7250000 -1.1753e-02 5 0.731403 0.7499987 -0.01859590 6.0267e-01 0.31132244 insignificant 1.0000e+00 1.000000 insignificant 2.5980e-01 0.78127999 insignificant 1.0000e+00 1.000000 insignificant 0.0312308 5.0666e-01 lowCoverage 1.0000e+00 lowCoverage 0.703869 0.7673469 -0.0646256 5 0.731403 0.786243 -0.05484031 7.4971e-01 3.6382e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant 4.5436e-01 0.07572645 insignificant 1.0000e+00 1.000000 insignificant -4.2515e-02 1.3379e-01 lowCoverage 1.000000 lowCoverage 0.7237569 0.7678208 -0.0475359 5 0.7083322 0.821869 -0.11353701 3.6046e-01 4.8639e-03 weaklyHypometh 1.0000e+00 5.8601e-02 weaklyHypometh 5.2608e-01 7.2501e-02 insignificant 1.0000e+00 7.4744e-01 insignificant -0.0737460 1.5625e-01 lowCoverage 1.0000e+00 lowCoverage chr11 10329350 10330350 37891 ADM ENSG00000148926 0.0076441 231 4 0.0026490 293 5 0.0117647 68 3 0.011905 240 5 0.000000 77 5 0.049806 310 5 0.0091375 139 5 0.032695 69 3 0.064615 50 3 0.000000 18 2 0.022103 232 5 0.000000 37 3 0.000000 6 1 0.000000 31 3 0.000000 17 1 0.000000 27 3 NA 0 0 0.020319 105 3 0.010417 57 3 0.002924 172 5 0.00000 19 2 0.0000000 5 0 0.030633 104 5 0.014286 74 5 0.068589 103 5 0.0039683 222 5 0.0000000 50 3 0.023810 20 2 0.016667 63 2 0.0096604 235 5 0.0064516 266 5 0.034758 157 4 0.0090909 125 5 0.051111 73 5 0.062692 151 4 0.0000000 135 3 0.023565 195 5 0.0437500 174 5 0.044348 318 5 0.1115148 227 5 0.030446 293 5 0.215975 71 3 0.063147 338 5 0.015702 0.0069190 0.030729 0.0206468 0.000000 0.086992 0.017535 0.047918 0.0461538 0.000000 0.048840 0.000000 0.0032204 0.000000 0.000000 0.000000 NA 0.020965 0.0163246 0.0028803 0.000000 0.000000 0.067719 0.0373134 0.117996 0.0074627 0.0000000 0.074627 0.008209 0.0142946 0.0052961 0.054301 0.0142469 0.009121 0.0080929 0.0193447 0.0129214 0.0685634 0.042734 0.1183268 0.0498404 0.1464612 0.0590645 1 0.022498 0.022003 0.00025190 4 0.010873 0.010624 0.00024903 9.9297e-01 9.8831e-01 lowCoverage 1.000000 1.0000000 lowCoverage 0.999922 0.91471653 lowCoverage 1 1.00000 lowCoverage -0.00445547 0.5390213 lowCoverage 1 lowCoverage 0.022518 0.0304807 0.0023819 4 0.015222 0.0441471 -0.0289252 2.5625e-01 7.6539e-03 lowCoverage 1.0000e+00 0.56417801 lowCoverage 5.5897e-01 3.0552e-02 lowCoverage 1.0000e+00 1.000000 lowCoverage -0.0187552 1.3138e-01 lowCoverage 1.0000e+00 lowCoverage 0.022508 0.0745790 -0.0497046 4 0.012685 0.056192 -0.04350684 9.9711e-01 7.4630e-07 lowCoverage 1.0000e+00 2.4877e-04 lowCoverage 1.0000e+00 2.8010e-06 lowCoverage 1.0000e+00 0.0020698 lowCoverage -0.08013995 7.5379e-02 lowCoverage 0.9192603 lowCoverage 0.022053 0.0304807 5.1533e-05 5 0.014873 0.0441471 -0.02927387 3.3463e-01 0.03081471 inconclusive 1.0000e+00 1.000000 insignificant 6.4578e-01 0.12551389 insignificant 1.0000e+00 1.000000 insignificant -0.0142998 2.5276e-01 lowCoverage 1.0000e+00 lowCoverage 0.022036 0.0745790 -0.0495842 5 0.012394 0.056192 -0.04379738 9.9937e-01 1.1613e-05 weaklyHypometh 1.0000e+00 0.00193542 weaklyHypometh 9.9999e-01 0.00010564 weaklyHypometh 1.0000e+00 0.080622 weaklyHypometh -7.5684e-02 8.7101e-02 lowCoverage 1.000000 lowCoverage 0.0304807 0.0746388 -0.0351954 5 0.0441471 0.067430 -0.02328299 7.0358e-01 2.0429e-02 weaklyHypometh 1.0000e+00 2.0429e-01 insignificant 9.9370e-01 2.6833e-03 weaklyHypometh 1.0000e+00 6.3652e-02 weaklyHypometh -0.0613847 1.4440e-01 lowCoverage 1.0000e+00 lowCoverage chr11 10392650 10393650 37893 ENSG00000221574 0.6514242 197 8 0.5796851 84 5 0.5747354 85 5 0.635584 128 8 0.676190 43 5 0.648273 165 7 0.8041379 71 2 0.781250 62 5 0.589048 41 5 0.637879 53 5 0.742321 149 5 0.800000 11 0 0.670000 70 5 0.846688 53 5 0.570833 46 3 0.700000 10 0 0.602941 69 2 0.608516 178 8 0.783333 59 5 0.673218 125 8 0.92000 13 2 0.5000000 2 0 0.446671 111 6 0.785714 19 0 0.500000 6 0 0.6921279 116 5 0.8611111 19 0 0.944444 15 2 0.750379 77 2 0.8034323 120 5 0.7334586 116 5 0.709987 118 8 0.6136054 56 5 0.644444 37 5 0.639261 106 5 0.5000000 2 0 0.630769 50 5 0.6255435 98 5 0.608703 117 6 0.7066283 187 8 0.661735 151 8 0.608182 116 6 0.704284 167 8 0.696047 0.7342045 0.663952 0.7471098 0.798246 0.813312 0.822232 0.800987 0.6782581 0.831340 0.805302 0.815789 0.7315789 0.854673 0.759868 0.802632 NA 0.753061 0.8131579 0.6934014 0.926316 0.711470 0.638091 0.9342105 0.773861 0.7137729 0.8771930 0.873832 0.795205 0.8386824 0.7914688 0.739348 0.7949875 0.707602 0.7339634 0.6640218 0.6761134 0.7307637 0.639285 0.6851903 0.7599624 0.7081340 0.7328611 0 0.701422 0.715458 -0.01273602 5 0.579175 0.555847 0.02332824 6.6833e-01 8.5015e-01 insignificant 1.000000 1.0000000 insignificant 0.938482 0.75292235 insignificant 1 1.00000 insignificant -0.04180759 0.4258678 lowCoverage 1 lowCoverage 0.715232 0.6618911 0.0390690 5 0.675262 0.5556769 0.1195846 1.9283e-02 8.6772e-01 weaklyHypermeth 1.5747e-01 1.00000000 insignificant 5.0592e-02 9.9285e-01 insignificant 4.8415e-01 1.000000 insignificant 0.0698656 3.3127e-02 lowCoverage 5.0965e-01 lowCoverage 0.701422 0.6770692 0.0334860 5 0.579175 0.648643 -0.06946836 6.1238e-01 6.8019e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.5480e-01 9.4977e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.02089648 4.8618e-01 lowCoverage 1.0000000 lowCoverage 0.729690 0.6618911 4.2093e-02 5 0.618187 0.5556769 0.06250997 1.7005e-01 0.95013323 insignificant 1.0000e+00 1.000000 insignificant 2.5943e-02 0.99858522 weaklyHypermeth 2.8213e-01 1.000000 insignificant 0.1116732 4.9650e-02 lowCoverage 6.1922e-01 lowCoverage 0.714481 0.6775068 0.0495570 5 0.518790 0.672067 -0.15327682 6.0589e-01 7.6469e-01 insignificant 1.0000e+00 1.00000000 insignificant 2.3483e-01 0.91313608 insignificant 1.0000e+00 1.000000 insignificant 6.2704e-02 2.4759e-01 lowCoverage 1.000000 lowCoverage 0.6618911 0.6693548 0.0173323 5 0.5556769 0.603281 -0.04760366 1.8396e-01 5.8681e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.7369e-01 7.9773e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0489692 1.4979e-01 lowCoverage 1.0000e+00 lowCoverage chr11 10468350 10469350 37895 AMPD3 ENSG00000133805 0.8461206 344 6 0.7624379 192 6 0.8053122 209 6 0.927339 374 6 0.963012 93 6 0.902520 314 6 0.9243928 241 6 0.825179 134 6 0.915141 200 6 0.940562 230 6 0.943139 192 6 0.919532 156 6 0.832453 294 6 0.957792 72 6 0.882478 214 6 0.662297 214 6 0.888500 67 6 0.519843 397 6 0.896834 67 6 0.887753 275 6 0.93889 112 6 0.6178188 196 6 0.874311 186 6 0.956506 91 6 0.730374 117 6 0.8922768 195 6 0.8966532 124 6 0.916816 137 6 0.753740 129 6 0.9555290 156 6 0.8671173 181 6 0.895094 280 6 0.0832784 179 6 0.068624 173 6 0.000000 84 2 0.0476190 50 6 0.155093 107 6 0.0164843 246 6 0.602369 354 6 0.6958823 369 6 0.744743 305 6 0.712131 309 6 0.747018 295 6 0.844984 0.7612922 0.804035 0.9261863 0.963313 0.902694 0.922412 0.822614 0.9141860 0.940975 0.942537 0.918568 0.8296015 0.959424 0.881436 0.657330 0.888243 0.519628 0.8958428 0.8861131 0.941355 0.615148 0.874528 0.9584917 0.731482 0.8914556 0.8928914 0.917926 0.752014 0.9550773 0.8657168 0.893527 0.0826913 0.068904 0.0421743 0.0469824 0.1559201 0.0159982 0.600529 0.6949769 0.7441289 0.7106333 0.7471539 6 0.842487 0.852416 -0.00968725 6 0.842378 0.852537 -0.01015924 8.3049e-01 4.5576e-01 insignificant 1.000000 1.0000000 insignificant 0.483694 0.89951541 insignificant 1 1.00000 insignificant 0.00220483 0.9548555 insignificant 1 insignificant 0.842487 0.0595948 0.7824673 6 0.842378 0.0594865 0.7828917 1.4429e-59 1.0000e+00 hypermethylated 2.8858e-57 1.00000000 hypermethylated 1.1067e-15 1.0000e+00 hypermethylated 1.8445e-13 1.000000 hypermethylated 0.7982822 1.0982e-14 hypermethylated 3.6608e-12 hypermethylated 0.842487 0.6924020 0.1452325 6 0.842378 0.699471 0.14290695 1.3416e-06 9.9994e-01 weaklyHypermeth 1.0320e-04 1.0000e+00 weaklyHypermeth 2.0837e-08 1.0000e+00 weaklyHypermeth 3.4728e-06 1.0000000 weaklyHypermeth 0.15970322 8.0747e-04 weaklyHypermeth 0.0621129 weaklyHypermeth 0.852416 0.0595948 7.9356e-01 6 0.852537 0.0594865 0.79305092 6.6335e-52 1.00000000 hypermethylated 1.3267e-49 1.000000 hypermethylated 1.8067e-13 1.00000000 hypermethylated 3.0112e-11 1.000000 hypermethylated 0.7960773 4.7835e-13 hypermethylated 4.7835e-10 hypermethylated 0.852416 0.6924020 0.1554894 6 0.852537 0.699471 0.15306619 2.7367e-07 1.0000e+00 weaklyHypermeth 1.8245e-05 1.00000000 weaklyHypermeth 1.6594e-07 1.00000000 weaklyHypermeth 2.7657e-05 1.000000 weaklyHypermeth 1.5750e-01 1.6565e-03 weaklyHypermeth 0.118322 insignificant 0.0595948 0.6924020 -0.6414276 6 0.0594865 0.699471 -0.63998473 1.0000e+00 2.8735e-30 hypomethylated 1.0000e+00 7.1838e-28 hypomethylated 1.0000e+00 1.1662e-09 hypomethylated 1.0000e+00 2.3323e-07 hypomethylated -0.6385789 4.4059e-08 hypomethylated 4.4059e-05 hypomethylated chr11 12137750 12138750 37941 MICAL2 ENSG00000133816 0.9192475 261 5 0.8135422 360 5 0.8438233 182 5 0.941721 207 5 0.880684 154 5 0.899252 377 5 0.8712777 157 5 0.867210 193 5 0.863732 152 5 0.950860 106 5 0.784222 269 5 0.828085 58 3 0.903016 189 5 0.923384 134 5 0.920440 241 5 0.802381 36 4 1.000000 2 0 0.868553 286 5 0.901153 323 5 0.903627 284 5 0.86854 100 5 0.9443452 79 3 0.941646 144 5 0.873088 61 4 0.950000 51 4 0.9232981 347 5 0.8163150 135 5 0.809859 128 5 0.930291 299 5 0.9324036 437 5 0.9464404 375 5 0.915691 257 5 0.8110645 235 5 0.855745 151 5 0.750000 193 4 0.8750000 15 2 0.765090 176 5 0.7722720 413 5 0.932938 326 5 0.9170035 215 5 0.889952 223 5 0.916346 367 5 0.955489 200 5 0.914028 0.8116709 0.824774 0.9407099 0.875481 0.900570 0.878952 0.895505 0.8745696 0.935570 0.932859 0.862821 0.9091499 0.917591 0.937979 0.860524 NA 0.860649 0.8938109 0.8930559 0.896655 0.931530 0.940528 0.8831800 0.979572 0.9349813 0.7688998 0.783195 0.937797 0.9311921 0.9408962 0.898976 0.7910637 0.834254 0.8924259 0.7809676 0.7384717 0.6870894 0.916936 0.8952950 0.9010895 0.9182735 0.9530391 4 0.894710 0.914629 -0.01803746 5 0.893956 0.911657 -0.01770089 9.7377e-01 1.4172e-01 insignificant 1.000000 1.0000000 insignificant 0.981546 0.09440015 insignificant 1 1.00000 insignificant -0.02001565 0.2967355 lowCoverage 1 lowCoverage 0.894710 0.8300930 0.0681385 5 0.893956 0.8239195 0.0700367 5.0457e-04 6.4390e-01 weaklyHypermeth 5.8671e-03 1.00000000 weaklyHypermeth 9.4796e-03 3.5823e-01 weaklyHypermeth 1.3739e-01 1.000000 insignificant 0.0794487 1.0064e-02 lowCoverage 2.0147e-01 lowCoverage 0.894710 0.9248685 -0.0312632 5 0.893956 0.924284 -0.03032810 9.4198e-01 3.2315e-02 weaklyHypometh 1.0000e+00 8.5040e-01 insignificant 8.5279e-01 4.1189e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant -0.03803504 3.1858e-02 lowCoverage 0.5589070 lowCoverage 0.914629 0.8300930 8.6485e-02 5 0.911657 0.8239195 0.08773759 2.5844e-03 0.92867418 weaklyHypermeth 2.6372e-02 1.000000 weaklyHypermeth 2.1538e-02 0.84110849 weaklyHypermeth 2.5339e-01 1.000000 insignificant 0.0994643 3.0191e-03 lowCoverage 8.0391e-02 lowCoverage 0.914629 0.9248685 -0.0127095 5 0.911657 0.924284 -0.01262721 8.2008e-01 3.5144e-01 insignificant 1.0000e+00 1.00000000 insignificant 6.4826e-01 0.56976620 insignificant 1.0000e+00 1.000000 insignificant -1.8019e-02 3.3497e-01 lowCoverage 1.000000 lowCoverage 0.8300930 0.9248685 -0.0997178 5 0.8239195 0.924284 -0.10036479 9.9498e-01 2.5607e-02 weaklyHypometh 1.0000e+00 2.4861e-01 insignificant 9.4307e-01 2.5582e-02 weaklyHypometh 1.0000e+00 3.4693e-01 insignificant -0.1174837 1.3855e-03 lowCoverage 7.5632e-02 lowCoverage chr11 12605050 12606050 37965 PARVA ENSG00000197702 0.7897163 76 3 0.5994029 93 5 0.5568182 71 7 0.882320 74 6 0.530483 60 4 0.584389 86 5 0.6936147 67 8 0.592803 76 5 0.733502 64 7 0.812626 80 8 0.727844 149 8 0.735855 68 4 0.771382 106 8 0.754687 78 4 0.721230 53 4 0.563988 45 4 0.895833 24 3 0.607922 83 8 0.777778 50 5 0.739268 58 5 0.91667 55 4 0.8833333 31 5 0.822995 91 4 0.680601 71 5 0.907759 54 4 0.6858150 78 4 0.7897527 93 4 0.922917 27 3 0.822683 105 8 0.6788721 57 5 0.8025568 60 5 0.740807 73 8 0.7010169 84 8 0.669571 73 8 0.721418 81 8 1.0000000 5 0 0.609815 85 5 0.8076923 63 5 0.800710 86 5 0.7633152 92 8 0.768671 94 8 0.661053 87 4 0.676471 86 5 0.782954 0.5877981 0.544845 0.8517656 0.532534 0.651714 0.656336 0.645295 0.7797631 0.812191 0.724485 0.738324 0.7795296 0.760201 0.786581 0.541461 0.952107 0.681969 0.7911877 0.7615813 0.896552 0.836782 0.873650 0.6580211 0.880380 0.6882888 0.8590904 0.893678 0.813173 0.6402821 0.7429467 0.784255 0.7101350 0.651515 0.6755726 0.9421581 0.5901233 0.7609026 0.828997 0.8043284 0.7539481 0.6520971 0.7297498 0 0.719780 0.762264 -0.05722677 7 0.687518 0.781403 -0.09388474 9.9914e-01 2.2640e-02 weaklyHypometh 1.000000 0.7807054 insignificant 0.999979 0.00113982 weaklyHypometh 1 0.22796 insignificant -0.10099002 0.0093197 lowCoverage 1 lowCoverage 0.719780 0.6982097 0.0102582 5 0.687518 0.7200806 -0.0325625 5.1706e-01 5.2895e-01 insignificant 1.0000e+00 1.00000000 insignificant 7.4922e-01 5.3009e-01 insignificant 1.0000e+00 1.000000 insignificant -0.0480124 4.5931e-01 insignificant 1.0000e+00 insignificant 0.720802 0.8089888 -0.0650747 8 0.704013 0.771836 -0.06782214 9.8456e-01 1.7030e-02 weaklyHypometh 1.0000e+00 5.4025e-01 insignificant 8.3182e-01 1.9200e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.03047093 4.2311e-01 insignificant 1.0000000 insignificant 0.762264 0.6982097 7.6768e-02 5 0.781403 0.7200806 0.06132224 3.5680e-02 0.99812789 weaklyHypermeth 2.8774e-01 1.000000 insignificant 3.0032e-02 0.99991619 weaklyHypermeth 3.0645e-01 1.000000 insignificant 0.0529776 4.2205e-01 lowCoverage 1.0000e+00 lowCoverage 0.761665 0.8089888 -0.0175115 7 0.754078 0.771836 -0.01775736 7.2982e-01 1.8811e-01 insignificant 1.0000e+00 1.00000000 insignificant 5.4543e-02 0.65333699 insignificant 1.0000e+00 1.000000 insignificant 7.0519e-02 9.1768e-02 lowCoverage 1.000000 lowCoverage 0.6958763 0.8089888 -0.0863612 5 0.6850907 0.771836 -0.08674489 9.5886e-01 1.9429e-03 weaklyHypometh 1.0000e+00 2.6615e-02 weaklyHypometh 8.7217e-01 2.0278e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0175415 7.8750e-01 insignificant 1.0000e+00 insignificant chr11 33853250 33854250 38265 LMO2 ENSG00000135363 0.802150 205 3 0.824849 146 3 0.6503127 60 6 0.8419404 104 6 0.5875000 29 3 0.8022571 222 6 0.8612245 38 6 0.6482790 88 6 0.5916667 23 2 0.9523810 26 3 0.8743290 181 6 0.500000 4 0 0.8333333 55 3 0.875661 30 3 0.9166667 21 3 NA 0 0 NA 0 0 0.5939615 144 4 0.6442682 212 3 0.728868 158 3 0.7316371 73 6 1.0000000 3 0 0.873717 88 6 0.539683 29 3 1.0000000 18 3 0.9196274 288 6 0.712977 56 6 0.500000 8 0 0.806878 175 3 0.7880366 246 6 0.9394627 238 6 0.8387314 124 4 0.8065385 95 4 0.9164462 95 3 0.7023810 46 3 1.0000000 2 0 0.758929 76 6 0.8292407 253 6 0.6889366 80 6 0.7755431 224 6 0.8008929 113 6 0.9411765 104 3 0.8842383 170 6 0.9044908 0.7570268 0.7922078 0.8971635 0.90909091 0.820605 0.7922078 0.9179842 0.4318182 0.8701299 0.8322905 0.9090909 1.0000000 0.794372 1.0000000 NA NA 0.7951151 0.8360404 0.8417600 0.6411171 NA 0.842778 0.5324675 1.0000000 0.8907962 0.873596 NA 0.8737374 0.8470737 0.9224000 0.7722979 0.8383217 0.8370611 0.91666667 0.97718691 0.820617 0.7380016 0.8277512 0.9210855 0.8998106 0.8930481 0.8321678 0 0.8361970 0.8662704 -0.02265443 3 0.672899 0.7837493 -0.1108499 0.99716972 0.05940128 lowCoverage 1.00000 1.00000 lowCoverage 9.3734e-01 0.38740257 lowCoverage 1.0000000 1.00000 lowCoverage -0.05258206 0.3642548 lowCoverage 1 lowCoverage 0.8380241 0.8112875 0.0305564 3 0.732012 0.746576 -0.0145643 3.8562e-01 6.2647e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 6.0354e-01 2.5154e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -8.3942e-02 1.5094e-01 lowCoverage 1.0000e+00 lowCoverage 0.8435689 0.8827786 -0.0400905 3 0.7320119 0.7575017 -0.02548981 9.6488e-01 2.0501e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.9053e-01 7.8505e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.06651037 2.5083e-01 lowCoverage 1.000000 lowCoverage 0.8668155 0.8112875 5.4585e-02 3 0.8192180 0.746576 0.0726418 1.0012e-01 7.6414e-01 lowCoverage 6.2968e-01 1.0000e+00 lowCoverage 4.0512e-01 5.2411e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0313600 6.3324e-01 lowCoverage 1.0000e+00 lowCoverage 0.869305 0.8827786 -0.01225944 6 0.846004 0.7575017 0.08850204 5.7543e-01 6.8268e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.3193e-01 9.3987e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0139283 8.3167e-01 lowCoverage 1.0000000 lowCoverage 0.8141593 0.8840580 -0.07378733 3 0.853230 0.8657162 -0.0124863 2.6421e-01 1.5696e-01 lowCoverage 1.0000e+00 9.8719e-01 lowCoverage 9.4987e-02 3.8111e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0174317 7.8522e-01 lowCoverage 1.0000000 lowCoverage chr11 33918050 33919050 38275 LMO2 ENSG00000135363 0.833494 205 4 0.823627 275 7 0.8056138 127 7 0.8756694 205 6 0.7513121 102 7 0.9041353 331 6 0.7761558 144 7 0.8834454 216 7 0.6928290 93 4 0.8299165 120 6 0.8625171 302 7 0.717033 49 4 0.8472987 144 7 0.633333 23 2 0.7902378 97 4 0.4262879 44 3 0.4855042 59 3 0.9010557 183 5 0.7613099 221 6 0.877831 245 5 0.8584724 90 5 0.6394558 81 5 0.723394 145 4 0.798571 86 6 0.8316327 81 4 0.8326202 241 7 0.875000 80 5 0.813215 51 4 0.937474 98 5 0.8839109 316 7 0.8799980 320 7 0.9182513 345 7 0.7742642 216 7 0.7159079 107 6 0.7404762 103 5 0.4300144 38 3 0.793452 125 7 0.7612239 209 7 0.9062242 205 6 0.8475591 235 6 0.8405427 186 6 0.6377851 224 3 0.8483270 152 7 0.8815158 0.8518875 0.8703466 0.8855894 0.76160386 0.883496 0.7889535 0.9113627 0.7917863 0.8320078 0.8456338 0.6759700 0.8964101 0.619288 0.7942584 0.6549251 0.7234173 0.8905695 0.8236480 0.9148221 0.8430990 0.8853772 0.856866 0.8085103 0.9026022 0.8848431 0.869858 0.8161927 0.9386491 0.8955956 0.9071322 0.9453850 0.8513296 0.6751207 0.85727630 0.58169080 0.832282 0.8551565 0.9204362 0.9181936 0.9269059 0.7772040 0.9305708 3 0.8470958 0.8846949 -0.04435281 7 0.822707 0.8668732 -0.0441666 0.99414213 0.00278939 weaklyHypometh 1.00000 0.68931 insignificant 9.8656e-01 0.03351858 weaklyHypometh 1.0000000 1.00000 insignificant -0.05873605 0.1312189 insignificant 1 insignificant 0.8470958 0.7882206 0.0554932 7 0.822707 0.746987 0.0757197 1.5396e-03 9.6716e-01 weaklyHypermeth 1.3746e-02 1.0000e+00 weaklyHypermeth 4.1915e-02 9.4325e-01 weaklyHypermeth 3.3802e-01 1.0000e+00 insignificant 7.1374e-02 2.8875e-01 insignificant 1.0000e+00 insignificant 0.8470958 0.8762475 -0.0249877 6 0.8227066 0.8093633 0.01334334 2.9274e-01 1.5540e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8896e-01 6.6254e-03 weaklyHypometh 1.0000e+00 3.6808e-01 insignificant -0.04215727 4.6334e-01 insignificant 1.000000 insignificant 0.8846949 0.7882206 9.8151e-02 7 0.8668732 0.746987 0.1198863 5.9439e-06 9.9999e-01 weaklyHypermeth 9.4347e-05 1.0000e+00 weaklyHypermeth 7.0183e-04 9.9997e-01 weaklyHypermeth 1.5257e-02 1.0000e+00 weaklyHypermeth 0.1301099 6.9207e-02 insignificant 7.2849e-01 insignificant 0.884695 0.8762475 0.01900760 6 0.866873 0.8093633 0.05750994 3.0612e-02 6.9300e-01 weaklyHypermeth 6.1225e-01 1.0000e+00 insignificant 7.7191e-01 3.0638e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0165788 7.6026e-01 insignificant 1.0000000 insignificant 0.7882206 0.8762475 -0.07941286 6 0.746987 0.8093633 -0.0623764 7.0337e-01 5.7899e-03 weaklyHypometh 1.0000e+00 6.2933e-02 weaklyHypometh 9.9242e-01 7.4156e-03 weaklyHypometh 1.0000e+00 1.2157e-01 insignificant -0.1135311 1.5068e-01 insignificant 1.0000000 insignificant chr11 34039950 34040950 38282 CAPRIN1 ENSG00000135387 0.887324 94 6 0.706085 114 6 0.6392857 53 6 0.8322751 68 6 0.8777778 36 6 0.8658910 216 6 0.7414021 47 6 0.8084722 110 6 0.5923681 46 6 0.7055556 68 6 0.8028380 172 6 0.883929 31 4 0.8353175 54 6 0.795455 50 4 0.7613636 70 6 0.5000000 4 0 0.6666667 4 0 0.8426435 79 6 0.8711039 96 6 0.879394 88 6 0.7040816 49 6 0.6314103 37 2 0.712482 50 6 0.818056 65 6 0.8202686 81 6 0.7611765 137 6 0.694715 72 5 0.950000 12 1 0.754167 71 6 0.7391534 81 6 0.7463170 96 6 0.7944176 175 6 0.5374408 63 6 0.7027926 94 6 0.6976737 95 6 0.5833333 12 0 0.467172 44 4 0.7776250 143 6 0.7309524 53 5 0.7969551 89 6 0.9405870 91 6 0.9055556 34 6 0.8539216 104 6 0.8801800 0.7051438 0.5884434 0.8352576 0.88301887 0.801903 0.7466307 0.8138758 0.5869354 0.7089623 0.8052747 0.8936995 0.8107966 0.753216 0.7770154 0.6208155 0.7291332 0.8350266 0.8071143 0.8212040 0.6609164 0.6416909 0.721228 0.8191038 0.8245853 0.7605771 0.702968 0.8923246 0.7537736 0.7414046 0.7525821 0.7998454 0.5549124 0.7106346 0.69198213 0.65380068 0.493654 0.7557851 0.8816262 0.8563776 0.9380490 0.8974843 0.8570107 0 0.7877358 0.7678186 0.02122987 6 0.813604 0.7951543 0.0184497 0.22947866 0.94130911 insignificant 1.00000 1.00000 insignificant 3.5143e-01 0.97737860 insignificant 1.0000000 1.00000 insignificant 0.01423702 0.6760086 insignificant 1 insignificant 0.7877358 0.6829268 0.1035986 6 0.813604 0.720626 0.0929780 2.4361e-04 9.9998e-01 weaklyHypermeth 2.3883e-03 1.0000e+00 weaklyHypermeth 3.4696e-04 1.0000e+00 weaklyHypermeth 7.0808e-03 1.0000e+00 weaklyHypermeth 1.4708e-01 2.6296e-02 lowCoverage 3.9249e-01 lowCoverage 0.7893333 0.8706199 -0.0859043 6 0.8528561 0.7790979 0.07375827 9.9745e-01 5.6214e-03 weaklyHypometh 1.0000e+00 3.1017e-01 insignificant 8.0328e-01 9.8970e-03 weaklyHypometh 1.0000e+00 4.7129e-01 insignificant -0.07083695 1.5345e-01 insignificant 1.000000 insignificant 0.7678186 0.6829268 8.1749e-02 6 0.7951543 0.720626 0.0745283 3.7743e-03 9.9878e-01 weaklyHypermeth 3.3699e-02 1.0000e+00 weaklyHypermeth 2.4699e-02 9.9988e-01 weaklyHypermeth 2.3083e-01 1.0000e+00 insignificant 0.1328475 3.9387e-02 lowCoverage 4.9233e-01 lowCoverage 0.767819 0.8767123 -0.11207594 6 0.795154 0.8987112 -0.10355690 9.9996e-01 4.2871e-05 weaklyHypometh 1.0000e+00 6.4759e-03 weaklyHypometh 9.9963e-01 4.0778e-04 weaklyHypometh 1.0000e+00 1.0194e-01 insignificant -0.0850740 9.3843e-02 insignificant 1.0000000 insignificant 0.6829268 0.8767123 -0.19458086 6 0.720626 0.8987112 -0.1780853 1.0000e+00 3.3962e-06 weaklyHypometh 1.0000e+00 1.0955e-04 weaklyHypometh 1.0000e+00 1.6157e-05 weaklyHypometh 1.0000e+00 1.5990e-03 weaklyHypometh -0.2179215 6.0958e-03 lowCoverage 0.1574317 lowCoverage chr11 35154150 35155150 38349 CD44 ENSG00000026508 0.626029 524 11 0.567739 306 11 0.5658405 229 11 0.7456050 298 11 0.6034407 165 8 0.5928865 448 11 0.5347148 138 11 0.6911876 219 11 0.7227968 107 6 0.7029485 116 9 0.7630151 516 11 0.608846 77 3 0.7099965 220 11 0.552827 140 6 0.7662587 146 9 0.4734848 89 4 0.5584207 37 3 0.6771881 394 11 0.6343772 313 11 0.668602 320 11 0.6860652 66 6 0.6281746 72 8 0.677455 293 11 0.741058 102 11 0.7106061 72 8 0.6214036 346 11 0.703449 128 11 0.444877 47 5 0.724595 371 11 0.6638245 266 11 0.6666745 295 11 0.6257777 351 11 0.6511484 237 11 0.5924603 203 11 0.6879378 250 11 0.7000000 19 0 0.688170 109 9 0.5308913 330 11 0.7257916 397 11 0.7894649 414 11 0.5991764 379 11 0.7560353 431 11 0.7017252 402 11 0.6770839 0.5565215 0.6664599 0.7208907 0.66358006 0.689683 0.6415030 0.6852557 0.6831699 0.7191768 0.7173552 0.6420437 0.7313464 0.714928 0.7378445 0.5520105 0.7237068 0.7130403 0.7240817 0.7103596 0.6992181 0.6743956 0.685124 0.7432158 0.6675641 0.7128625 0.738796 0.4905006 0.7450135 0.6583575 0.6888168 0.6959944 0.7090824 0.6255159 0.71402681 0.75739677 0.727383 0.6520150 0.7349418 0.7997500 0.7594697 0.7654687 0.7568644 5 0.6905109 0.7011208 -0.01170998 11 0.642292 0.6534287 -0.0111366 0.82713615 0.21109370 insignificant 1.00000 1.00000 insignificant 7.2936e-01 0.31704731 insignificant 1.0000000 1.00000 insignificant -0.01951984 0.5084947 insignificant 1 insignificant 0.6910042 0.6716028 0.0195374 11 0.604616 0.576130 0.0284863 3.0163e-01 9.7844e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6563e-01 7.0442e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -3.4578e-03 9.1882e-01 insignificant 1.0000e+00 insignificant 0.6903967 0.7637173 -0.0704893 11 0.5911910 0.7203009 -0.12910994 9.9990e-01 1.6895e-05 weaklyHypometh 1.0000e+00 2.8800e-03 weaklyHypometh 9.9994e-01 1.5695e-04 weaklyHypometh 1.0000e+00 2.6158e-02 weaklyHypometh -0.07612841 8.1158e-02 insignificant 1.000000 insignificant 0.7017471 0.6716028 3.2978e-02 11 0.6503738 0.576130 0.0742442 1.6597e-02 9.8258e-01 weaklyHypermeth 1.2937e-01 1.0000e+00 insignificant 2.8871e-01 7.8602e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0160621 6.5809e-01 insignificant 1.0000e+00 insignificant 0.701082 0.7636004 -0.05651641 11 0.604220 0.6987856 -0.09456564 9.8671e-01 1.5184e-03 weaklyHypometh 1.0000e+00 1.1680e-01 insignificant 9.6357e-01 1.0130e-02 weaklyHypometh 1.0000e+00 7.7925e-01 insignificant -0.0566086 1.8780e-01 insignificant 1.0000000 insignificant 0.6724891 0.7642680 -0.08701045 11 0.596363 0.7093987 -0.1130361 9.9999e-01 2.4898e-05 weaklyHypometh 1.0000e+00 6.3402e-04 weaklyHypometh 9.9923e-01 5.0411e-02 insignificant 1.0000e+00 4.4220e-01 insignificant -0.0726706 1.2317e-01 insignificant 1.0000000 insignificant chr11 35531250 35532250 38371 PAMR1 ENSG00000149090 0.857742 514 19 0.793539 466 19 0.6766886 223 16 0.8013216 244 17 0.7046970 142 18 0.8298869 572 20 0.6877293 154 14 0.7618353 312 19 0.7720530 246 18 0.7839766 222 15 0.7797193 707 19 0.807604 71 8 0.7998337 353 19 0.792208 48 6 0.8227598 233 19 0.8227106 85 6 0.6511903 167 11 0.8031252 364 19 0.7723415 308 15 0.834627 481 20 0.7886624 156 15 0.8214195 178 17 0.742409 305 19 0.723608 138 14 0.8314815 90 11 0.8103910 548 19 0.826143 176 13 0.745040 73 5 0.791497 346 16 0.7625763 513 19 0.8019954 469 19 0.7718885 724 20 0.7184315 414 19 0.7358346 347 19 0.7422847 433 19 0.7250000 86 4 0.750133 146 13 0.7825244 617 19 0.8281848 363 20 0.8219347 447 19 0.8779625 324 17 0.7919254 340 18 0.8606952 365 17 0.8465460 0.7907065 0.6707141 0.7939540 0.67576317 0.833734 0.6963408 0.7558280 0.7693076 0.7640925 0.7682931 0.8029500 0.7891966 0.782985 0.8283278 0.8073953 0.6825013 0.8105566 0.7791780 0.8249193 0.8057123 0.8448817 0.757695 0.7599660 0.8269885 0.8088691 0.829779 0.7632731 0.7835579 0.7625390 0.7926278 0.7876112 0.7170170 0.7380255 0.73940329 0.74807509 0.735709 0.7729986 0.8180846 0.8319365 0.8708770 0.8096725 0.8618399 3 0.7904263 0.8221206 -0.00592913 19 0.785338 0.7784774 0.0068608 0.16591782 0.36190604 insignificant 1.00000 1.00000 insignificant 9.3446e-01 0.08612146 insignificant 1.0000000 1.00000 insignificant -0.00697988 0.6698356 insignificant 1 insignificant 0.7905245 0.7767988 0.0411081 19 0.798926 0.759260 0.0396652 3.3803e-06 9.9934e-01 weaklyHypermeth 4.9710e-05 1.0000e+00 weaklyHypermeth 4.3266e-04 9.8633e-01 weaklyHypermeth 7.8665e-03 1.0000e+00 weaklyHypermeth 3.5411e-02 3.3575e-02 weaklyHypermeth 4.6267e-01 insignificant 0.7905245 0.7862969 -0.0524379 18 0.7989257 0.8462947 -0.04736902 1.0000e+00 1.7280e-05 weaklyHypometh 1.0000e+00 2.8800e-03 weaklyHypometh 1.0000e+00 2.2517e-06 weaklyHypometh 1.0000e+00 7.5057e-04 weaklyHypometh -0.05836116 1.3487e-02 weaklyHypometh 0.382918 insignificant 0.8222940 0.7767988 4.7644e-02 19 0.7917382 0.759260 0.0324777 3.5245e-06 9.8418e-01 weaklyHypermeth 5.9738e-05 1.0000e+00 weaklyHypermeth 4.0761e-04 9.9979e-01 weaklyHypermeth 1.0527e-02 1.0000e+00 weaklyHypermeth 0.0423912 8.1603e-03 weaklyHypermeth 1.5397e-01 insignificant 0.822294 0.7862969 -0.04959784 18 0.791738 0.8462947 -0.05455651 1.0000e+00 1.0421e-05 weaklyHypometh 1.0000e+00 2.6053e-03 weaklyHypometh 1.0000e+00 6.2924e-03 weaklyHypometh 1.0000e+00 6.7530e-01 insignificant -0.0513813 2.3039e-02 weaklyHypometh 0.9090584 insignificant 0.7767988 0.7862969 -0.09808749 18 0.759260 0.8462947 -0.0870342 1.0000e+00 2.6706e-13 weaklyHypometh 1.0000e+00 3.8976e-11 weaklyHypometh 1.0000e+00 3.4632e-07 weaklyHypometh 1.0000e+00 6.9264e-05 weaklyHypometh -0.0937725 1.2454e-03 weaklyHypometh 0.0622711 weaklyHypometh chr11 43715150 43716150 38466 HSD17B12 ENSG00000149084 0.659472 68 5 0.732080 63 5 0.6333333 21 2 0.7112836 68 5 0.9000000 28 2 0.6387755 55 5 0.6872180 48 2 0.5922619 50 4 0.5170068 24 2 0.8111111 20 2 0.8541546 77 5 0.500000 3 0 0.7757576 31 2 0.833333 23 2 0.8428571 37 5 1.0000000 2 0 NA 0 0 0.6194842 76 6 0.7500000 20 0 0.625000 29 2 0.7190476 22 2 1.0000000 2 0 0.866667 21 2 0.550000 22 1 0.6482593 58 5 0.6455556 45 5 0.600000 14 0 0.833333 5 0 0.774167 47 4 0.7519841 41 5 0.7222222 39 3 0.7619048 22 0 0.6454545 51 2 0.5952381 37 2 0.6976190 66 5 0.5000000 7 0 0.680769 39 3 0.6572059 50 5 0.6410256 61 2 0.6074074 72 5 0.7642399 63 5 0.8555556 24 2 0.7450292 64 5 0.7274845 0.7249075 0.7539683 0.8528295 0.75714286 0.704762 0.7246688 0.9375000 0.6530612 0.9047619 0.8471178 0.5238095 0.7835498 0.587302 0.7523810 1.0000000 NA 0.7784276 0.5238095 0.8214286 0.7210884 1.0000000 0.809524 0.9047619 0.7289916 0.5859788 0.511905 0.8253968 0.7767857 0.8941799 0.7619048 0.7619048 0.6190476 0.8231293 0.71428571 0.73809524 0.586081 0.6992297 0.7802198 0.6948854 0.8323751 0.8888889 0.7607909 0 0.7291105 0.7181009 0.00206481 2 0.665401 0.6151505 0.0502506 0.41800548 0.39948427 lowCoverage 1.00000 1.00000 lowCoverage 5.0652e-01 0.62406204 lowCoverage 1.0000000 1.00000 lowCoverage -0.01926364 0.6840109 lowCoverage 1 lowCoverage 0.7341772 0.6720000 0.0672109 2 0.716070 0.662485 0.0535856 2.8395e-02 9.6707e-01 lowCoverage 1.9316e-01 1.0000e+00 lowCoverage 9.6568e-03 9.7516e-01 lowCoverage 1.1100e-01 1.0000e+00 lowCoverage 9.0784e-02 4.7527e-02 lowCoverage 5.8675e-01 lowCoverage 0.7297297 0.7429577 -0.0013390 2 0.6890298 0.7259802 -0.03695048 7.1395e-01 3.1590e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 6.6898e-01 6.7217e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.00248684 9.6433e-01 lowCoverage 1.000000 lowCoverage 0.7222222 0.6720000 5.9764e-02 2 0.7175741 0.662485 0.0550895 2.4016e-02 8.7122e-01 lowCoverage 1.7659e-01 1.0000e+00 lowCoverage 1.0712e-02 9.0235e-01 lowCoverage 1.2312e-01 1.0000e+00 lowCoverage 0.1100472 3.0963e-02 lowCoverage 4.0468e-01 lowCoverage 0.720238 0.7429577 -0.00322024 2 0.703029 0.7259802 -0.02295112 9.0068e-01 5.2722e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.9473e-01 7.7445e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0167768 7.7544e-01 lowCoverage 1.0000000 lowCoverage 0.6720000 0.7428571 -0.06608599 5 0.662485 0.7163723 -0.0538877 8.4071e-01 1.0606e-02 weaklyHypometh 1.0000e+00 9.5553e-02 weaklyHypometh 8.4775e-01 2.1941e-02 weaklyHypometh 1.0000e+00 2.4379e-01 insignificant -0.0932704 1.2397e-01 lowCoverage 1.0000000 lowCoverage chr11 44247950 44248950 38482 EXT2 ENSG00000151348 0.838308 218 5 0.830303 53 4 0.7709957 75 4 0.8255291 95 6 0.6248677 40 5 0.8912089 202 6 0.6769231 70 3 0.8081331 83 5 0.8652778 47 5 0.9888889 63 5 0.9024184 130 5 0.695833 44 3 0.8633333 81 5 0.687500 18 2 0.8188854 81 4 0.7812500 35 3 1.0000000 21 3 0.8406190 162 5 0.8963845 82 6 0.904278 146 6 0.9414141 41 4 0.8096947 45 5 0.679961 52 4 0.934945 57 5 0.9200000 33 4 0.9221486 107 6 0.851192 95 5 0.822711 34 3 0.910190 58 5 0.9129543 114 6 0.8766789 86 4 0.8976039 197 6 0.2296037 84 5 0.6687879 47 4 0.1250000 60 3 0.0000000 120 4 0.389593 56 5 0.0627644 208 6 0.8569776 88 5 0.8033594 134 5 0.8569309 72 5 0.6901038 96 5 0.9112434 117 5 0.8643988 0.8420703 0.7472272 0.8858186 0.84129301 0.885958 0.8728243 0.8125088 0.9235604 0.9817518 0.9230697 0.8185827 0.9670316 0.884145 0.8583384 0.7342823 0.9639304 0.8110301 0.9220639 0.8778174 0.9238369 0.7878533 0.765458 0.9531483 0.8817518 0.9545432 0.871002 0.9189594 0.9583316 0.9155164 0.9072217 0.8991317 0.1466149 0.6460628 0.13835469 0.00000000 0.384384 0.0410394 0.8585613 0.8044586 0.7825663 0.7640181 0.8874348 3 0.8618911 0.8900979 -0.03561827 5 0.846143 0.8974816 -0.0513384 0.99588023 0.00893186 weaklyHypometh 1.00000 0.74432 insignificant 9.7402e-01 0.12877729 insignificant 1.0000000 1.00000 insignificant -0.04774435 0.1325810 lowCoverage 1 lowCoverage 0.8613975 0.1617391 0.6894799 6 0.725266 0.152680 0.5725851 5.1874e-38 1.0000e+00 hypermethylated 1.7291e-35 1.0000e+00 hypermethylated 3.4009e-10 1.0000e+00 hypermethylated 6.0482e-08 1.0000e+00 hypermethylated 5.7959e-01 1.8845e-03 lowCoverage 4.9593e-02 lowCoverage 0.8618911 0.8145957 0.0548377 5 0.8461432 0.8127671 0.03337611 5.1350e-02 9.3584e-01 insignificant 9.6887e-01 1.0000e+00 insignificant 4.5271e-02 8.2920e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.00182381 9.6774e-01 lowCoverage 1.000000 lowCoverage 0.8900979 0.1620209 6.9744e-01 5 0.8974816 0.178127 0.7193544 1.4113e-34 1.0000e+00 hypermethylated 4.7044e-32 1.0000e+00 hypermethylated 1.6822e-10 1.0000e+00 hypermethylated 4.3199e-08 1.0000e+00 hypermethylated 0.6273331 1.3035e-03 lowCoverage 3.8340e-02 lowCoverage 0.890098 0.8145957 0.08616970 4 0.897482 0.8127671 0.08471449 2.1604e-04 9.9813e-01 lowCoverage 1.1370e-02 1.0000e+00 lowCoverage 5.3911e-03 9.1108e-01 lowCoverage 2.2463e-01 1.0000e+00 lowCoverage 0.0495682 2.9035e-01 lowCoverage 1.0000000 lowCoverage 0.1620209 0.8145957 -0.68398231 5 0.178127 0.8127671 -0.6346399 1.0000e+00 7.7217e-15 hypomethylated 1.0000e+00 1.9304e-12 hypomethylated 1.0000e+00 3.1532e-07 hypomethylated 1.0000e+00 6.9264e-05 hypomethylated -0.5777649 1.4914e-03 lowCoverage 0.0677895 lowCoverage chr11 44297450 44298450 38484 ALX4 ENSG00000052850 0.021412 384 6 0.011174 330 6 0.1252019 241 6 0.0064731 359 6 0.0162743 185 6 0.0155300 405 6 0.0059524 250 6 0.0026455 276 6 0.0054945 451 6 0.0057471 326 6 0.0042735 289 6 0.015635 190 6 0.0088034 373 6 0.000000 134 6 0.0000000 248 6 0.0144928 213 6 0.0229885 202 6 0.0087998 494 9 0.0075758 176 6 0.006135 461 6 0.0123457 107 6 0.0000000 280 6 0.037967 207 6 0.000000 136 6 0.0105847 134 6 0.0069890 408 6 0.000000 161 6 0.033730 194 6 0.013333 217 6 0.0000000 430 6 0.0714286 368 6 0.0044255 509 6 0.0167909 355 6 0.0256534 145 6 0.1052668 257 3 0.0000000 40 3 0.058658 201 6 0.0163103 362 6 0.0031300 559 6 0.0057319 346 6 0.0032680 311 6 0.0015221 405 6 0.0153173 416 9 0.0202980 0.0111603 0.1300020 0.0060439 0.01701226 0.015264 0.0053908 0.0029450 0.0055463 0.0055303 0.0041122 0.0157236 0.0087937 0.000000 0.0000000 0.0131255 0.0221210 0.0133041 0.0068611 0.0062757 0.0118798 0.0000000 0.042577 0.0000000 0.0096273 0.0074923 0.000000 0.0348907 0.0128302 0.0000000 0.0000000 0.0043635 0.0189301 0.0235497 0.08364589 0.00000000 0.064553 0.0172696 0.0033799 0.0056612 0.0037613 0.0023046 0.0242695 6 0.0140963 0.0082618 0.00603600 6 0.014428 0.0078914 0.0065363 0.13171113 0.96066080 insignificant 1.00000 1.00000 insignificant 5.0978e-02 0.98853624 insignificant 1.0000000 1.00000 insignificant -0.00066988 0.9387756 insignificant 1 insignificant 0.0140963 0.0536765 -0.0399194 6 0.014428 0.041386 -0.0269584 9.2334e-01 6.9778e-04 weaklyHypometh 1.0000e+00 1.1630e-01 insignificant 8.7975e-01 3.3997e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -2.1883e-02 2.3857e-01 insignificant 1.0000e+00 insignificant 0.0140304 0.0078585 0.0051256 6 0.0096185 0.0050362 0.00458227 5.5477e-01 9.9735e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.1842e-01 8.5428e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00943658 1.5758e-01 insignificant 1.000000 insignificant 0.0082618 0.0536765 -4.4151e-02 6 0.0078914 0.041386 -0.0334947 9.9961e-01 8.4144e-04 weaklyHypometh 1.0000e+00 1.6829e-01 insignificant 9.9850e-01 1.0027e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0212129 2.5358e-01 insignificant 1.0000e+00 insignificant 0.008886 0.0079761 0.00047429 6 0.078193 0.0064751 0.07171754 7.3640e-01 8.7835e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.8113e-01 3.0598e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0101065 1.5532e-01 insignificant 1.0000000 insignificant 0.0536765 0.0079800 0.04386713 6 0.041386 0.0075543 0.0338318 1.7136e-02 9.9820e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 1.1682e-01 9.8412e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0313193 1.0438e-01 insignificant 0.9776823 insignificant chr11 44503950 44504950 38489 ALX4 ENSG00000052850 0.842548 241 8 0.686500 185 7 0.8906350 188 8 0.8463018 140 6 0.5602368 117 6 0.8429703 237 7 0.6301712 224 8 0.7091051 158 8 0.7958798 155 8 0.5976067 127 8 0.7876804 259 8 0.913579 158 7 0.7116610 186 8 1.000000 11 1 0.7855365 208 8 0.7664595 115 8 0.8369911 148 7 0.5542478 141 5 0.8061334 173 8 0.739318 214 7 0.9100000 76 6 0.7207792 46 4 0.809324 196 8 0.613545 114 8 0.8876263 44 4 0.7464550 168 8 0.858279 143 7 0.826852 90 8 0.741746 122 8 0.7586248 245 8 0.8088745 208 8 0.9321747 269 7 0.7100031 169 8 0.7199348 190 8 0.8432432 170 4 0.8250000 41 3 0.558637 191 9 0.7066791 200 8 0.7698135 196 6 0.7576079 245 6 0.7061443 169 6 0.8720102 165 6 0.6233288 179 6 0.8992368 0.8240591 0.9410536 0.9146260 0.83596542 0.927701 0.8361396 0.9319454 0.8382944 0.8262011 0.8515790 0.9331169 0.8479214 0.909169 0.8525461 0.7615287 0.8853685 0.9003254 0.8904806 0.8843720 0.9647167 0.9403269 0.884304 0.9355103 0.9391164 0.8969344 0.926072 0.9645115 0.8981573 0.8489832 0.9235296 0.8966039 0.9336130 0.8415875 0.84962797 0.90419643 0.886529 0.7019144 0.9503155 0.9417966 0.9236169 0.9322493 0.8861872 4 0.8363368 0.8570598 -0.00600499 8 0.612305 0.7524054 -0.1401000 0.92366640 0.08640929 insignificant 1.00000 1.00000 insignificant 9.9918e-01 0.01130221 weaklyHypometh 1.0000000 1.00000 insignificant -0.03601188 0.3415879 insignificant 1 insignificant 0.8363368 0.7721124 0.0655472 8 0.612305 0.516291 0.0960144 1.6830e-03 7.6603e-01 weaklyHypermeth 1.4726e-02 1.0000e+00 weaklyHypermeth 5.1374e-01 2.5386e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.7929e-02 4.6140e-01 insignificant 1.0000e+00 insignificant 0.8367830 0.9308176 -0.0396735 6 0.6376665 0.6769575 -0.03929095 2.4822e-02 1.3674e-02 weaklyHypometh 5.3962e-01 4.2263e-01 insignificant 4.3884e-01 1.5610e-02 weaklyHypometh 1.0000e+00 6.1056e-01 insignificant 0.01939715 7.0044e-01 insignificant 1.000000 insignificant 0.8570598 0.7721124 7.4009e-02 8 0.7524054 0.516291 0.2361144 2.2910e-03 8.5904e-01 weaklyHypermeth 2.1411e-02 1.0000e+00 weaklyHypermeth 6.8305e-02 9.9007e-01 insignificant 5.2542e-01 1.0000e+00 insignificant 0.0739405 1.6729e-01 insignificant 1.0000e+00 insignificant 0.856977 0.9308176 -0.01781320 6 0.729897 0.6769575 0.05293934 5.5766e-02 2.5445e-01 insignificant 9.7835e-01 1.0000e+00 insignificant 1.1563e-01 8.8645e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0554090 2.8781e-01 insignificant 1.0000000 insignificant 0.7737226 0.9308176 -0.10109500 6 0.563227 0.6769575 -0.1137309 4.8705e-01 3.3894e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.2215e-01 5.2058e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0185315 7.5798e-01 insignificant 1.0000000 insignificant chr11 44611950 44612950 38498 CD82 ENSG00000085117 0.767086 133 3 0.518398 105 7 0.4233793 90 7 0.7319109 44 3 0.5699495 68 7 0.8523729 77 3 0.6450893 73 5 0.5710227 48 5 0.4722647 92 7 0.5333333 66 3 0.5275749 145 8 0.573179 86 8 0.5532595 106 6 NA 0 0 0.3633705 101 3 0.4402530 100 7 0.5008905 146 8 0.9415873 61 3 0.4576223 108 8 0.455277 104 3 0.4936364 35 3 0.4285714 28 3 0.412958 105 5 0.561310 43 3 0.5833333 16 2 0.5757275 108 8 0.912582 47 3 0.622341 49 3 0.628253 57 6 0.6146735 113 8 0.7108135 89 7 0.4251374 163 3 0.3426471 72 7 0.1785714 94 8 0.0363636 84 5 0.7857143 18 3 0.337013 55 4 0.3718119 93 7 0.7107512 101 3 0.3500508 136 3 0.4704433 77 3 0.4361568 166 4 0.5651926 87 3 0.8544991 0.9159226 0.8261979 0.8632305 0.92222222 0.841545 1.0000000 0.9280303 0.9425770 0.9770833 0.8562389 0.8333333 0.9050426 NA 0.8792337 0.9339193 0.9242325 0.9355952 0.8534229 0.8793717 0.8125000 0.8531250 0.858364 0.8747024 0.7621528 0.9566937 0.876906 0.8628964 0.9142157 0.9554248 0.9589120 0.8661358 0.6293573 0.4900794 NA 0.77157738 0.787453 0.8608218 0.8864351 0.8036478 0.7462284 0.8218270 0.8454323 2 0.7027952 0.7631887 -0.01032859 3 0.514203 0.5450052 -0.0308022 0.91859926 0.26291373 lowCoverage 1.00000 1.00000 lowCoverage 5.6720e-01 0.74488013 lowCoverage 1.0000000 1.00000 lowCoverage -0.00720853 0.8936521 lowCoverage 1 lowCoverage 0.7027952 0.3894231 0.1953491 7 0.514203 0.304891 0.2093121 4.6299e-12 1.0000e+00 weaklyHypermeth 1.5965e-10 1.0000e+00 weaklyHypermeth 2.0845e-08 1.0000e+00 weaklyHypermeth 1.4889e-06 1.0000e+00 weaklyHypermeth 2.3155e-01 7.5754e-02 insignificant 8.3246e-01 insignificant 0.7027952 0.7777778 0.0647907 3 0.5142031 0.4782628 0.03594025 4.1598e-04 3.7661e-01 lowCoverage 1.9809e-02 1.0000e+00 lowCoverage 3.2222e-03 9.3272e-01 lowCoverage 1.4885e-01 1.0000e+00 lowCoverage 0.06705056 3.7582e-01 lowCoverage 1.000000 lowCoverage 0.7631887 0.3894231 2.0339e-01 3 0.5450052 0.304891 0.2401142 1.8700e-09 1.0000e+00 lowCoverage 6.9258e-08 1.0000e+00 lowCoverage 9.7778e-06 1.0000e+00 lowCoverage 5.4321e-04 1.0000e+00 lowCoverage 0.2387578 7.0137e-02 lowCoverage 7.2892e-01 lowCoverage 0.763189 0.7777778 0.06690656 3 0.545005 0.4782628 0.06674240 5.0760e-03 8.3600e-01 lowCoverage 1.4100e-01 1.0000e+00 lowCoverage 3.3529e-02 9.3609e-01 lowCoverage 8.5971e-01 1.0000e+00 lowCoverage 0.0742591 3.4424e-01 lowCoverage 1.0000000 lowCoverage 0.3894231 0.7777778 -0.10877467 3 0.304891 0.4782628 -0.1733718 9.9989e-01 2.4685e-02 lowCoverage 1.0000e+00 2.0234e-01 lowCoverage 9.9995e-01 1.4497e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.1644987 2.0777e-01 lowCoverage 1.0000000 lowCoverage chr11 45882750 45883750 38517 MAPK8IP1 ENSG00000121653 0.838569 398 7 0.837169 192 7 0.7672917 124 7 0.9774598 312 7 0.9727891 81 5 0.8838289 483 7 0.7621528 110 5 0.8233560 192 7 0.9633118 109 5 0.8569444 120 5 0.9422191 307 7 0.951020 50 3 0.9787369 122 5 0.922842 102 5 0.8389977 133 5 1.0000000 46 3 NA 0 0 0.8452614 881 7 0.7192433 399 7 0.740694 422 7 0.9496241 91 7 0.8452381 42 3 0.704260 148 5 1.000000 77 7 0.9677871 105 7 0.9540642 292 7 0.651790 118 5 0.871753 52 5 0.944232 266 7 0.8241438 362 7 0.9733636 463 7 0.9224488 393 7 0.9067879 186 7 0.8694934 256 5 0.6872416 517 5 0.9583333 24 2 0.535331 124 7 0.8885157 374 5 0.9020096 298 7 0.7867314 354 7 0.9218145 346 7 0.9030398 483 7 0.9420373 331 7 0.9531108 0.8679879 0.9366127 0.9863761 0.94601889 0.956960 0.9388214 0.8755993 0.9600349 0.9847054 0.9613539 0.9025641 0.9576956 0.887473 0.9436341 1.0000000 NA 0.9584321 0.9659753 0.9659455 0.9690816 0.9561404 0.933438 1.0000000 0.9808155 0.9549860 0.886596 0.9049043 0.9691485 0.9584202 0.9609557 0.9459752 0.9453545 0.7769651 0.79250936 0.86456810 0.842486 0.9442710 0.9692504 0.9105769 0.9492547 0.9341279 0.9676536 3 0.9454148 0.9514321 -0.00728943 7 0.691452 0.6638513 0.0276011 0.97670589 0.60117437 insignificant 1.00000 1.00000 insignificant 9.8017e-01 0.69650548 insignificant 1.0000000 1.00000 insignificant -0.00922264 0.8098772 insignificant 1 insignificant 0.9454268 0.8487508 0.0918824 7 0.719502 0.549697 0.1698057 3.0813e-05 9.9351e-01 weaklyHypermeth 3.8516e-04 1.0000e+00 weaklyHypermeth 3.0840e-02 9.9956e-01 weaklyHypermeth 2.7053e-01 1.0000e+00 insignificant 6.7219e-02 3.6951e-01 insignificant 1.0000e+00 insignificant 0.9464481 0.9387417 0.0074785 7 0.8643156 0.8351441 0.02917148 4.9842e-01 9.2898e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.0050e-01 9.5075e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01629036 6.4202e-01 insignificant 1.000000 insignificant 0.9514321 0.8493243 9.8481e-02 7 0.6638513 0.604666 0.0591851 1.5402e-04 9.9971e-01 weaklyHypermeth 1.8782e-03 1.0000e+00 weaklyHypermeth 1.8713e-02 9.9988e-01 weaklyHypermeth 1.8528e-01 1.0000e+00 insignificant 0.0764417 3.3108e-01 insignificant 1.0000e+00 insignificant 0.952618 0.9387417 0.01479717 7 0.829814 0.8351441 -0.00532989 2.3116e-01 9.6049e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.1528e-02 9.8374e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0070677 8.6842e-01 insignificant 1.0000000 insignificant 0.8504736 0.9387417 -0.09015543 7 0.755833 0.8351441 -0.0793113 8.7531e-01 2.7642e-02 weaklyHypometh 1.0000e+00 2.2292e-01 insignificant 9.2534e-01 1.7744e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0835094 2.8369e-01 insignificant 1.0000000 insignificant chr11 45995250 45996250 38523 GYLTL1B ENSG00000165905 0.845772 404 13 0.851798 149 12 0.7611111 67 6 0.7845331 380 13 0.9063492 45 4 0.8771855 290 12 0.8063466 64 6 0.6642247 61 7 0.6987935 47 4 0.9777778 52 6 0.8227635 244 14 0.700000 55 5 0.8734432 101 10 NA 0 0 0.7939757 104 9 0.8414286 34 4 0.8500000 53 4 0.8664936 423 13 0.8164090 114 8 0.869061 295 13 0.7030864 35 3 0.7705305 149 10 0.871758 245 14 0.920513 41 3 0.8497738 114 6 0.7938821 170 13 0.871488 76 7 0.800000 49 4 0.852666 83 6 0.8478080 202 13 0.8232184 193 12 0.8339539 375 13 0.6889301 99 7 0.7657444 105 6 0.8035167 209 13 0.6904762 49 4 0.846667 41 4 0.8233208 194 13 0.8655303 253 10 0.9060217 396 13 0.8759525 375 13 0.8955269 312 13 0.8659072 411 13 0.8795019 0.9273172 0.7273731 0.8571726 0.91447493 0.906049 0.9514420 0.9159046 0.7462707 0.9801325 0.9042700 0.8509934 0.9078791 NA 0.8406429 0.8930937 0.9685430 0.8602724 0.8887647 0.8680313 0.7566225 0.8012573 0.909216 0.9116998 0.9135047 0.9045820 0.889103 0.9437086 0.8189271 0.8932968 0.8725376 0.8465154 0.7685703 0.7512545 0.89197528 0.76269316 0.958057 0.8874761 0.8930650 0.8937996 0.9413244 0.8839542 0.8896020 1 0.8658168 0.8409485 0.01937424 12 0.840266 0.8368156 0.0034501 0.20214316 0.95676644 insignificant 1.00000 1.00000 insignificant 4.4296e-01 0.79052537 insignificant 1.0000000 1.00000 insignificant -0.00677753 0.7786349 insignificant 1 insignificant 0.8658168 0.8146552 0.0493736 11 0.840266 0.783840 0.0564261 8.8819e-03 9.9984e-01 weaklyHypermeth 6.6295e-02 1.0000e+00 weaklyHypermeth 2.4245e-01 9.6906e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.1670e-02 1.4636e-01 insignificant 1.0000e+00 insignificant 0.8658168 0.9061248 -0.0230990 12 0.8402657 0.8813964 -0.04113068 9.5860e-01 3.3174e-02 weaklyHypometh 1.0000e+00 7.2868e-01 insignificant 8.5213e-01 1.0472e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.06034212 4.9534e-03 weaklyHypometh 0.198138 insignificant 0.8406467 0.8134864 3.1506e-02 12 0.8254724 0.731584 0.0938887 5.2332e-02 9.9260e-01 insignificant 3.5122e-01 1.0000e+00 insignificant 3.2833e-01 9.8129e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0584473 1.0229e-01 insignificant 9.4715e-01 insignificant 0.840949 0.9061248 -0.03708359 12 0.836816 0.8813964 -0.04458079 9.9567e-01 1.5053e-03 weaklyHypometh 1.0000e+00 1.1680e-01 insignificant 9.0128e-01 3.1610e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0535646 1.0111e-02 weaklyHypometh 0.5321355 insignificant 0.8146552 0.9061248 -0.06224075 11 0.783840 0.8813964 -0.0975568 9.9109e-01 3.7678e-04 weaklyHypometh 1.0000e+00 6.8505e-03 weaklyHypometh 9.6869e-01 7.8857e-02 insignificant 1.0000e+00 6.1130e-01 insignificant -0.1120119 8.3734e-03 weaklyHypometh 0.1860759 insignificant chr11 46315550 46316550 38542 DGKZ ENSG00000149091 0.729228 259 10 0.583633 190 10 0.6706247 111 10 0.7190932 173 10 0.6841667 81 10 0.6895202 216 10 0.6953030 89 7 0.6950397 138 10 0.6491667 95 10 0.6922348 80 6 0.6552760 280 10 0.700140 60 7 0.7085310 119 10 0.731293 45 7 0.7116287 110 10 0.5692308 55 3 0.5064935 33 3 0.7070045 166 10 0.7071889 143 10 0.660871 120 10 0.6456522 83 5 0.6133333 43 3 0.805371 145 8 0.695044 117 7 0.7058161 158 7 0.7520907 168 10 0.612880 155 5 0.652525 68 6 0.781967 165 10 0.6796738 149 10 0.7246999 143 10 0.7330511 175 10 0.6422748 177 10 0.5467075 110 9 0.6427106 106 7 0.8077778 38 3 0.525848 93 7 0.6177050 182 10 0.6999015 224 10 0.6359755 264 10 0.7363649 257 10 0.6875192 190 6 0.7172702 202 10 0.7429688 0.6036681 0.6900388 0.7424424 0.70905556 0.715650 0.7216364 0.7217989 0.6722937 0.7101515 0.6716816 0.7266014 0.7239987 0.801631 0.7185645 0.5976923 0.5783966 0.7307829 0.7350075 0.7396551 0.6670290 0.6560000 0.795829 0.7308246 0.7403372 0.7715862 0.705310 0.7460000 0.7981137 0.7085878 0.7471444 0.7469023 0.6655914 0.5763785 0.65317705 0.80237037 0.611205 0.7026808 0.7310591 0.7180377 0.7612244 0.6974252 0.7380052 0 0.7217018 0.7349936 -0.02537991 10 0.684500 0.7067520 -0.0222516 0.90587290 0.08781413 insignificant 1.00000 1.00000 insignificant 9.8135e-01 0.12169391 insignificant 1.0000000 1.00000 insignificant -0.02689213 0.2390679 insignificant 1 insignificant 0.7214202 0.6388102 0.0453213 10 0.622273 0.581097 0.0411760 1.1613e-02 7.8590e-01 weaklyHypermeth 8.5392e-02 1.0000e+00 weaklyHypermeth 7.5362e-02 4.9189e-01 insignificant 5.4217e-01 1.0000e+00 insignificant 4.2779e-02 3.5558e-01 insignificant 1.0000e+00 insignificant 0.7217018 0.7403169 -0.0183959 10 0.6845004 0.7066119 -0.02211155 8.9806e-01 1.1212e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.8086e-01 2.1146e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02212297 3.2643e-01 insignificant 1.000000 insignificant 0.7349936 0.6406250 7.5307e-02 10 0.7067520 0.639207 0.0675451 6.2923e-05 9.4952e-01 weaklyHypermeth 8.5032e-04 1.0000e+00 weaklyHypermeth 1.4481e-02 9.7575e-01 weaklyHypermeth 1.4928e-01 1.0000e+00 insignificant 0.0696715 1.6190e-01 insignificant 1.0000e+00 insignificant 0.734056 0.7396658 -0.00173285 10 0.642502 0.6423745 0.00012729 6.3607e-01 3.0637e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.0654e-01 7.7062e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0047692 8.5054e-01 insignificant 1.0000000 insignificant 0.6406250 0.7403169 -0.07368310 10 0.639207 0.7066119 -0.0674051 5.2808e-01 1.2370e-03 weaklyHypometh 1.0000e+00 1.8463e-02 weaklyHypometh 7.8290e-01 1.3532e-02 weaklyHypometh 1.0000e+00 1.7129e-01 insignificant -0.0649024 1.8740e-01 insignificant 1.0000000 insignificant chr11 46498450 46499450 38550 ENSG00000222006 0.760967 188 9 0.751118 138 9 0.7596320 105 9 0.8281716 177 9 0.7046971 87 9 0.7843105 327 9 0.7697972 106 9 0.6790507 123 9 0.5185814 121 9 0.7998282 97 5 0.7458863 320 9 0.830000 55 5 0.7299208 141 8 0.666667 22 1 0.7101852 114 9 0.6137566 54 5 0.8869048 63 5 0.7675120 175 9 0.7709680 171 9 0.787827 278 9 0.8666667 45 4 0.6440393 73 8 0.709558 165 9 0.595833 45 5 0.8312739 95 6 0.6971360 192 9 0.806268 70 7 0.883333 20 2 0.856167 108 9 0.7138741 206 9 0.7796709 204 9 0.7611379 368 9 0.6722616 116 9 0.7016117 114 9 0.7213578 120 9 0.6752517 75 6 0.784609 76 6 0.7953283 229 9 0.8160269 217 9 0.8206502 282 9 0.7621014 228 9 0.8140977 220 9 0.7310521 213 9 0.7768950 0.7192182 0.7362102 0.7614890 0.73367493 0.765835 0.7740033 0.7649076 0.6683434 0.8739163 0.7458555 0.8112676 0.8357671 0.728722 0.7033789 0.6674939 0.8850324 0.7506542 0.7416772 0.8094006 0.8826291 0.7075733 0.793107 0.6147565 0.7800916 0.7069022 0.770288 0.7532120 0.8329150 0.7543937 0.7630616 0.7633283 0.7197174 0.6889026 0.68494784 0.77323264 0.809622 0.7366186 0.7689287 0.7833185 0.7687924 0.7842352 0.7865677 2 0.7665968 0.7617850 0.00764028 9 0.741494 0.7549659 -0.0134724 0.55103017 0.84310693 insignificant 1.00000 1.00000 insignificant 9.4845e-01 0.60804333 insignificant 1.0000000 1.00000 insignificant -0.01879078 0.5642311 insignificant 1 insignificant 0.7664336 0.7219178 0.0524305 9 0.723029 0.694327 0.0287017 1.6934e-03 9.9474e-01 weaklyHypermeth 1.4726e-02 1.0000e+00 weaklyHypermeth 5.8519e-02 9.9491e-01 insignificant 4.3999e-01 1.0000e+00 insignificant 1.8219e-02 5.3248e-01 insignificant 1.0000e+00 insignificant 0.7666200 0.7870690 -0.0120054 9 0.7401848 0.8034743 -0.06328943 8.7785e-01 1.1482e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6039e-01 1.7232e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04549660 9.7223e-02 insignificant 1.000000 insignificant 0.7616352 0.7219178 4.3617e-02 9 0.7374635 0.694327 0.0431364 1.7676e-02 9.1157e-01 weaklyHypermeth 1.3391e-01 1.0000e+00 insignificant 1.7267e-01 9.8618e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0370098 2.9738e-01 insignificant 1.0000e+00 insignificant 0.761965 0.7870690 -0.01919459 9 0.755730 0.8034743 -0.04774433 9.8736e-01 2.8147e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4505e-01 5.9793e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0267058 4.1683e-01 insignificant 1.0000000 insignificant 0.7215364 0.7870690 -0.06653391 9 0.670814 0.8034743 -0.1326605 9.5588e-01 1.1520e-03 weaklyHypometh 1.0000e+00 1.7454e-02 weaklyHypometh 9.6949e-01 3.5354e-02 weaklyHypometh 1.0000e+00 3.4487e-01 insignificant -0.0637156 5.0902e-02 insignificant 0.6199225 insignificant chr11 46556550 46557550 38557 ENSG00000222006 0.733721 102 3 0.692409 103 5 0.5714286 35 5 0.8261111 85 5 0.7300000 59 5 0.7634804 50 3 0.7100000 42 4 0.7750347 81 5 0.6666667 22 1 0.6666667 14 1 0.7727379 125 5 0.600000 18 2 0.6466667 46 5 0.766667 32 5 0.5027778 30 3 0.6111111 9 0 1.0000000 4 0 0.7030186 100 4 0.7506884 85 5 0.777778 29 3 0.7500000 11 0 0.6666667 3 0 0.820964 53 5 0.742857 22 2 0.7936508 45 2 0.6749457 71 5 0.798077 35 3 0.583333 12 1 0.794127 78 5 0.7335446 95 5 0.7868778 73 5 0.7942489 48 3 0.7342424 76 5 0.6244444 42 4 0.6506536 84 5 0.7666667 14 0 0.692478 51 5 0.7134734 72 5 0.7695385 64 4 0.7703352 77 5 0.8120879 78 5 0.7132353 43 2 0.6664911 80 5 0.8062016 0.7437584 0.8095238 0.7888889 0.74444444 0.763480 0.6666667 0.7718833 0.7500000 1.0000000 0.8161616 0.5000000 0.7074074 0.666667 0.5888889 0.6111111 NA 0.6716976 0.7719807 0.7777778 0.6666667 0.6666667 0.701607 0.7936508 0.7936508 0.6796296 0.730769 0.5833333 0.7976190 0.7384474 0.7820513 0.7256653 0.7904040 0.6333333 0.68491285 0.61111111 0.666035 0.6335668 0.7492308 0.7732083 0.7820513 0.8553922 0.6730896 0 0.7189542 0.7417582 -0.01342650 5 0.600019 0.7843478 -0.1843292 0.85979995 0.64848398 insignificant 1.00000 1.00000 insignificant 9.3326e-01 0.26163377 insignificant 1.0000000 1.00000 insignificant -0.03159295 0.3188753 lowCoverage 1 lowCoverage 0.7196262 0.6755162 0.0535787 5 0.720022 0.681837 0.0381851 2.4269e-02 7.8600e-01 weaklyHypermeth 1.6854e-01 1.0000e+00 insignificant 5.7601e-02 4.5030e-01 insignificant 4.3761e-01 1.0000e+00 insignificant 1.6355e-02 6.1498e-01 lowCoverage 1.0000e+00 lowCoverage 0.7196262 0.7105263 -0.0128161 5 0.7200223 0.7450331 -0.02501082 8.3701e-01 2.8889e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.9985e-01 3.4155e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03298946 3.5987e-01 lowCoverage 1.000000 lowCoverage 0.7408088 0.6755162 6.2553e-02 5 0.7412174 0.681837 0.0593801 1.9270e-02 6.0267e-01 weaklyHypermeth 1.4381e-01 1.0000e+00 insignificant 8.0102e-02 6.1604e-01 insignificant 6.0227e-01 1.0000e+00 insignificant 0.0479479 1.2986e-01 lowCoverage 1.0000e+00 lowCoverage 0.740809 0.7105263 -0.00209364 5 0.741217 0.7450331 -0.00381575 6.6170e-01 2.0435e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.3007e-01 4.0080e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0013965 9.6670e-01 lowCoverage 1.0000000 lowCoverage 0.6755162 0.7105263 -0.07400551 5 0.681837 0.7450331 -0.0631959 9.5865e-01 3.6080e-02 weaklyHypometh 1.0000e+00 2.6529e-01 insignificant 9.3055e-01 7.2085e-02 insignificant 1.0000e+00 5.7668e-01 insignificant -0.0493445 1.7528e-01 lowCoverage 1.0000000 lowCoverage chr11 46804150 46805150 38561 ENSG00000209709 0.083853 866 19 0.089234 841 17 0.0712268 770 19 0.0809449 982 19 0.0502619 462 14 0.1035177 1170 18 0.1617478 701 19 0.0752085 761 18 0.0643240 766 19 0.0700832 668 19 0.1598937 650 18 0.073082 668 19 0.0692990 610 14 0.189501 354 7 0.0639302 1033 19 0.1246856 746 19 0.0043662 440 8 0.1310552 866 19 0.0605077 528 19 0.155809 799 19 0.1399767 201 9 0.0863158 412 17 0.092978 826 19 0.073426 323 14 0.1148519 256 17 0.0445174 1025 19 0.161260 735 15 0.054968 321 14 0.076515 447 14 0.0488516 1131 19 0.0792147 962 19 0.1182438 981 19 0.0035097 533 14 0.0430622 347 19 0.0666667 477 10 0.0560838 205 11 0.020934 521 15 0.0382304 631 19 0.0374810 1217 19 0.0406862 1096 19 0.0372485 1085 19 0.0360231 875 19 0.0500603 1011 19 0.0894465 0.0692814 0.0893654 0.0913853 0.06202711 0.107769 0.1563028 0.0983075 0.0877518 0.0926183 0.1396597 0.0968824 0.0733923 0.077211 0.0721120 0.0956228 0.0293282 0.0923485 0.0647542 0.0829102 0.1505767 0.0353242 0.116207 0.0625660 0.0656409 0.0530907 0.083998 0.0461160 0.0901629 0.0561409 0.0310647 0.1540298 0.0050499 0.0397921 0.00000000 0.00408272 0.019453 0.0387996 0.0415580 0.0389837 0.0348163 0.0388157 0.0470927 14 0.0831687 0.0753281 0.01576077 19 0.100746 0.0824943 0.0182518 0.07591010 0.09886797 insignificant 1.00000 1.00000 insignificant 1.4789e-01 0.55379805 insignificant 1.0000000 1.00000 insignificant 0.00319990 0.8290137 insignificant 1 insignificant 0.0831687 0.0195284 0.0652449 14 0.100746 0.029659 0.0710871 4.0442e-17 1.0000e+00 weaklyHypermeth 2.5276e-15 1.0000e+00 weaklyHypermeth 2.7473e-09 9.9999e-01 weaklyHypermeth 3.4342e-07 1.0000e+00 weaklyHypermeth 5.6046e-02 8.3284e-04 weaklyHypermeth 2.7761e-02 weaklyHypermeth 0.0831176 0.0217638 0.0418465 19 0.0901740 0.0366908 0.05348322 5.9971e-09 9.2676e-01 weaklyHypermeth 7.4963e-07 1.0000e+00 weaklyHypermeth 4.7779e-06 2.0201e-01 weaklyHypermeth 9.5558e-04 1.0000e+00 weaklyHypermeth 0.05382675 4.7519e-05 weaklyHypermeth 0.012462 weaklyHypermeth 0.0753281 0.0195284 5.0601e-02 14 0.0824943 0.029659 0.0528353 1.7322e-08 1.0000e+00 weaklyHypermeth 5.2491e-07 1.0000e+00 weaklyHypermeth 1.6476e-06 1.0000e+00 weaklyHypermeth 1.0984e-04 1.0000e+00 weaklyHypermeth 0.0528456 1.9841e-03 weaklyHypermeth 5.0874e-02 weaklyHypermeth 0.075348 0.0217638 0.03220155 19 0.086244 0.0366908 0.04955329 1.8545e-03 1.0000e+00 weaklyHypermeth 6.8360e-02 1.0000e+00 weaklyHypermeth 4.4622e-02 9.8862e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.0506269 5.0417e-04 weaklyHypermeth 0.0720250 weaklyHypermeth 0.0195356 0.0217638 -0.01894663 14 0.031007 0.0366908 -0.0056836 9.9965e-01 1.5937e-03 weaklyHypometh 1.0000e+00 2.2135e-02 weaklyHypometh 9.9990e-01 2.0589e-03 weaklyHypometh 1.0000e+00 4.9884e-02 weaklyHypometh -0.0022188 8.2788e-01 insignificant 1.0000000 insignificant chr11 47172250 47173250 38570 PACSIN3 ENSG00000165912 0.752136 199 5 0.706715 199 6 0.6368989 127 6 0.7665697 199 6 0.7337691 53 5 0.7109524 258 7 0.5086923 131 7 0.6917381 137 7 0.6579004 105 5 0.8219145 105 7 0.7785485 162 6 0.506713 84 4 0.6897157 140 5 0.611111 14 1 0.7058201 103 5 0.6976264 67 6 0.4652778 100 7 0.6374579 271 4 0.5971332 148 5 0.884582 196 7 0.9274725 55 5 0.5052136 141 7 0.568062 138 7 0.630375 73 6 0.6112566 85 4 0.8150271 145 6 0.611788 98 6 0.659394 60 4 0.706965 133 5 0.8078055 161 6 0.6785299 179 6 0.6670559 246 7 0.6626442 144 6 0.5032361 89 5 0.5553418 114 4 0.4489796 43 3 0.650072 114 8 0.5746577 238 7 0.5294805 246 7 0.7618046 209 8 0.5516076 188 7 0.7200942 180 5 0.7248868 220 8 0.7333107 0.5918298 0.5571398 0.8238466 0.65861756 0.781681 0.5593454 0.5937523 0.7204846 0.6870255 0.6588057 0.3960551 0.5640333 NA 0.6230992 0.6034680 0.4290383 0.5819570 0.3301432 0.8214838 0.8937944 0.3844660 0.624497 0.5597239 0.6114476 0.8676812 0.728221 0.7501401 0.6164372 0.7923127 0.6041045 0.6114789 0.5157803 0.6362070 0.46668171 0.25390156 0.764344 0.2320916 0.5920140 0.7085275 0.4520098 0.5902058 0.7253916 3 0.6393853 0.6578600 -0.00694045 5 0.623349 0.5597648 0.0635844 0.20449633 0.86219266 insignificant 1.00000 1.00000 insignificant 6.6078e-01 0.56384310 insignificant 1.0000000 1.00000 insignificant -0.00434848 0.9171755 insignificant 1 insignificant 0.6403006 0.4447439 0.1961043 5 0.680017 0.582252 0.0977656 2.5900e-05 9.9896e-01 weaklyHypermeth 3.2785e-04 1.0000e+00 weaklyHypermeth 5.6626e-02 9.9876e-01 insignificant 4.3761e-01 1.0000e+00 insignificant 1.1224e-01 2.0682e-02 weaklyHypermeth 3.2316e-01 insignificant 0.6404011 0.5906040 0.0188413 5 0.6980191 0.6147537 0.08326534 9.5309e-02 6.4157e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.9790e-01 8.2417e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02048887 7.1675e-01 insignificant 1.000000 insignificant 0.6582948 0.4447439 2.0355e-01 5 0.6106525 0.582252 0.0284008 1.0780e-02 9.9836e-01 weaklyHypermeth 8.8360e-02 1.0000e+00 weaklyHypermeth 1.2160e-01 9.9810e-01 insignificant 8.4443e-01 1.0000e+00 insignificant 0.1165902 2.9084e-02 weaklyHypermeth 3.9459e-01 insignificant 0.658730 0.5906040 0.02824953 5 0.671718 0.6147537 0.05696405 1.6932e-01 3.8897e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.9667e-02 6.9368e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0248374 6.8536e-01 insignificant 1.0000000 insignificant 0.4439946 0.5906040 -0.18814443 6 0.540477 0.6147537 -0.0742768 9.4180e-01 7.5699e-03 weaklyHypometh 1.0000e+00 7.8040e-02 weaklyHypometh 8.9545e-01 3.9372e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0917528 1.6177e-01 insignificant 1.0000000 insignificant chr11 47393750 47394750 38577 SLC39A13 ENSG00000165915 0.718605 116 6 0.526188 232 10 0.4670186 224 6 0.7515039 144 6 0.7169947 126 9 0.7194142 340 9 0.6119621 105 6 0.7077855 114 5 0.7278543 255 9 0.5381395 101 5 0.6726936 133 6 0.585671 88 5 0.4991000 134 5 0.531250 34 4 0.6361111 107 5 0.7227730 167 9 0.5449550 75 5 0.5128259 278 9 0.6861472 64 5 0.598281 168 6 0.7882024 96 9 0.5847462 147 8 0.753953 209 10 0.668915 99 9 0.6966668 102 8 0.6988312 346 10 0.684746 232 9 0.626808 144 9 0.682375 329 9 0.6675791 292 10 0.6248226 392 10 0.7835999 494 10 0.2814834 261 10 0.3553086 132 6 0.1666667 67 4 0.4355263 123 6 0.421627 129 8 0.3917219 396 10 0.5387945 159 6 0.6823280 244 10 0.6082122 118 3 0.6682626 221 9 0.5542980 344 9 0.7760226 0.4059343 0.4202036 0.6747267 0.63055999 0.665267 0.6188138 0.6543586 0.6887583 0.6604422 0.6852704 0.6389011 0.5544784 0.753334 0.6377924 0.6250573 0.4989879 0.3165000 0.6253655 0.6122440 0.6879915 0.3781423 0.662097 0.6459639 0.6067484 0.4897741 0.707618 0.5677214 0.6009053 0.6334280 0.5550690 0.7407293 0.0433304 0.0350390 0.02192982 0.11513158 0.068139 0.0456800 0.5174973 0.3955862 0.5647392 0.5476959 0.4052915 3 0.6645591 0.7727273 -0.00882880 9 0.707791 0.6542619 0.0535291 0.19715095 0.03873103 weaklyHypometh 1.00000 1.00000 insignificant 7.9282e-01 0.13341621 insignificant 1.0000000 1.00000 insignificant -0.06467341 0.0255237 weaklyHypometh 1 insignificant 0.6645591 0.4521661 0.4126631 9 0.707791 0.299501 0.4082904 2.5988e-33 9.6075e-01 hypermethylated 4.3313e-31 1.0000e+00 hypermethylated 3.6289e-10 9.8378e-01 hypermethylated 6.0482e-08 1.0000e+00 hypermethylated 2.8171e-01 3.6349e-04 hypermethylated 1.4540e-02 hypermethylated 0.6645591 0.7154696 0.0835967 9 0.7077910 0.6634555 0.04433557 1.0621e-02 7.1988e-01 weaklyHypermeth 2.6554e-01 1.0000e+00 insignificant 7.3048e-02 5.8191e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01338459 7.1631e-01 insignificant 1.000000 insignificant 0.7727273 0.4521661 3.2011e-01 10 0.6542619 0.299501 0.3547613 6.0954e-29 9.9980e-01 hypermethylated 1.3558e-26 1.0000e+00 hypermethylated 5.9894e-09 9.9988e-01 hypermethylated 1.1979e-06 1.0000e+00 hypermethylated 0.3463814 1.2951e-04 hypermethylated 6.4755e-03 hypermethylated 0.772727 0.7154696 0.06467731 9 0.654262 0.6634555 -0.00919354 6.5794e-03 9.7430e-01 weaklyHypermeth 1.7314e-01 1.0000e+00 insignificant 3.5222e-02 7.5600e-01 weaklyHypermeth 8.8055e-01 1.0000e+00 insignificant 0.0780580 5.4589e-02 insignificant 1.0000000 insignificant 0.4521661 0.7154696 -0.26572659 9 0.299501 0.6634555 -0.3639548 9.9731e-01 3.2843e-11 hypomethylated 1.0000e+00 2.7369e-09 hypomethylated 9.9991e-01 1.0306e-05 hypomethylated 1.0000e+00 1.1451e-03 hypomethylated -0.2683234 6.0501e-04 hypomethylated 0.0355891 hypomethylated chr11 47921550 47922550 38607 NUP160 ENSG00000030066 0.648478 132 5 0.586584 90 5 0.5849071 90 5 0.7140196 82 5 0.8666667 24 2 0.6731888 221 5 0.6143259 91 5 0.6571862 88 5 0.6146537 71 5 0.6458730 57 5 0.6717886 163 5 0.619298 92 5 0.6050568 92 5 NA 0 0 0.6645933 104 5 0.6507353 57 5 0.5469925 72 5 0.7035823 112 5 0.6490327 108 5 0.656186 193 5 0.7490287 35 3 0.8321429 33 4 0.554428 86 5 0.770707 40 4 0.8545455 42 4 0.6742834 145 5 0.722727 46 4 0.737374 40 4 0.668366 95 5 0.6936276 168 5 0.6815999 127 5 0.6097415 278 5 0.5757323 81 5 0.5348651 59 5 0.6623636 117 5 0.8000000 37 4 0.682062 59 5 0.5870155 182 5 0.6984064 174 5 0.7036085 146 5 0.5936125 118 5 0.6582706 176 5 0.7196338 139 5 0.6649915 0.6133993 0.6068333 0.7322687 0.84375000 0.676236 0.6331716 0.6838621 0.6118298 0.6465980 0.7030546 0.6398483 0.6197446 NA 0.6877617 0.6644072 0.5669741 0.7101060 0.6694669 0.6679803 0.7042905 0.8098028 0.556158 0.7303504 0.8285985 0.6814343 0.673335 0.6912879 0.7014059 0.7098108 0.6930401 0.6292485 0.5482185 0.5447131 0.69066051 0.76446759 0.660343 0.6117369 0.7063876 0.7210810 0.6247584 0.6631618 0.7607667 4 0.6549768 0.6643172 -0.01174317 5 0.647048 0.6606681 -0.0136197 0.72977938 0.39641263 insignificant 1.00000 1.00000 insignificant 8.9956e-01 0.03868646 weaklyHypometh 1.0000000 1.00000 insignificant -0.06116265 0.0481281 lowCoverage 1 lowCoverage 0.6549768 0.6205607 0.0361494 5 0.647048 0.614472 0.0325766 1.9940e-02 9.5699e-01 weaklyHypermeth 1.4450e-01 1.0000e+00 insignificant 2.8433e-01 7.8577e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.0878e-02 8.0338e-01 lowCoverage 1.0000e+00 lowCoverage 0.6549768 0.6852590 -0.0317141 5 0.6470484 0.6789029 -0.03185456 9.8168e-01 7.1053e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8434e-01 9.2154e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02348803 4.1453e-01 lowCoverage 1.000000 lowCoverage 0.6643172 0.6205607 4.6640e-02 5 0.6606681 0.614472 0.0461962 6.8070e-02 9.8764e-01 insignificant 4.4201e-01 1.0000e+00 insignificant 1.1267e-01 9.8370e-01 insignificant 7.9906e-01 1.0000e+00 insignificant 0.0720411 1.5310e-01 lowCoverage 1.0000e+00 lowCoverage 0.664317 0.6852590 -0.02204804 5 0.660668 0.6789029 -0.01823489 8.9165e-01 2.7794e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.0421e-01 3.9794e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0376746 2.8134e-01 lowCoverage 1.0000000 lowCoverage 0.6205607 0.6852590 -0.07027171 5 0.614472 0.6789029 -0.0644311 9.8918e-01 3.1783e-02 weaklyHypometh 1.0000e+00 2.4638e-01 insignificant 9.3431e-01 8.5159e-02 insignificant 1.0000e+00 6.4029e-01 insignificant -0.0343665 4.6923e-01 lowCoverage 1.0000000 lowCoverage chr11 48087650 48088650 38631 PTPRJ ENSG00000149177 0.603344 391 9 0.373355 211 9 0.4876543 178 9 0.6455617 323 9 0.6833417 122 8 0.6299435 494 9 0.5386965 147 9 0.5870309 263 9 0.5876543 129 9 0.6075473 189 9 0.5135273 369 9 0.557804 58 5 0.6707554 229 9 0.776592 84 7 0.6299746 156 9 0.4903199 43 4 0.3543129 47 3 0.5315564 305 9 0.6726847 189 9 0.674209 391 9 0.6542569 73 7 0.6576521 113 9 0.606316 312 9 0.780388 87 8 0.6209556 85 9 0.6072576 334 9 0.661862 138 8 0.630985 76 7 0.592590 272 9 0.6484557 351 9 0.6187624 326 9 0.6367335 470 9 0.5742328 292 11 0.5293483 212 9 0.5670058 265 8 0.5919192 44 4 0.502336 181 9 0.5309931 316 9 0.5693141 351 9 0.4699812 390 9 0.5703719 364 9 0.6345270 239 9 0.5970194 404 9 0.6564480 0.5488293 0.5209043 0.7062531 0.72967338 0.701774 0.5953484 0.7082799 0.6430600 0.6832404 0.6919992 0.6098053 0.6856848 0.731117 0.7086493 0.4850179 0.5864692 0.7085528 0.7249928 0.6957642 0.7451595 0.7093131 0.668892 0.8083777 0.6787675 0.6854882 0.703434 0.6737042 0.6743137 0.6878594 0.6721803 0.7249207 0.6074689 0.5780943 0.62133631 0.61793494 0.592489 0.5982932 0.6601728 0.6412516 0.6522999 0.6862842 0.6755763 8 0.6419639 0.6579446 -0.02194908 9 0.576259 0.6294138 -0.0531551 0.77029164 0.02196027 weaklyHypometh 1.00000 1.00000 insignificant 7.7530e-01 0.00023111 weaklyHypometh 1.0000000 0.13905 insignificant -0.06222467 0.0293392 weaklyHypometh 1 insignificant 0.6419639 0.5664122 0.0796867 9 0.576259 0.542444 0.0338145 3.8413e-05 9.8277e-01 weaklyHypermeth 4.6281e-04 1.0000e+00 weaklyHypermeth 9.8042e-02 8.9163e-01 insignificant 6.9533e-01 1.0000e+00 insignificant 3.1487e-02 2.5513e-01 insignificant 1.0000e+00 insignificant 0.6419639 0.6006865 0.0211109 9 0.5762587 0.5451403 0.03111843 8.9906e-02 7.4323e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.4496e-01 4.8577e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01255060 7.3287e-01 insignificant 1.000000 insignificant 0.6579446 0.5664122 1.0218e-01 9 0.6294138 0.542444 0.0869696 2.5365e-07 9.9970e-01 weaklyHypermeth 5.7648e-06 1.0000e+00 weaklyHypermeth 2.6341e-04 9.9929e-01 weaklyHypermeth 7.7452e-03 1.0000e+00 weaklyHypermeth 0.0937121 3.0509e-04 weaklyHypermeth 1.3868e-02 weaklyHypermeth 0.657945 0.6006865 0.04031712 9 0.629414 0.5451403 0.08427355 7.6539e-04 7.0064e-01 weaklyHypermeth 3.4790e-02 1.0000e+00 weaklyHypermeth 2.8934e-03 7.5076e-01 weaklyHypermeth 1.6074e-01 1.0000e+00 insignificant 0.0747753 4.9103e-02 weaklyHypermeth 1.0000000 insignificant 0.5664122 0.6006865 -0.05888554 9 0.542444 0.5451403 -0.0026960 7.3596e-01 1.8972e-03 weaklyHypometh 1.0000e+00 2.4639e-02 weaklyHypometh 8.7341e-01 6.9984e-02 insignificant 1.0000e+00 5.6898e-01 insignificant -0.0189368 5.5829e-01 insignificant 1.0000000 insignificant chr11 56759450 56760450 38659 LRRC55 ENSG00000183908 0.947756 250 10 0.766865 311 10 0.7700000 116 10 0.9503151 275 10 0.9785714 97 6 0.8389801 284 10 0.8008333 64 8 0.8686057 160 10 0.8504274 77 10 0.8636889 124 10 0.9216854 263 10 0.162500 23 1 0.9167358 140 10 0.779762 88 10 0.9295455 117 10 0.7708333 49 7 NA 0 0 0.9111275 377 10 0.9128391 297 10 0.908200 274 10 0.9245960 102 10 0.9524531 134 10 0.932118 108 10 0.986111 44 7 0.8622052 351 10 0.8496761 310 10 0.772606 104 10 0.715385 33 2 0.808183 200 10 0.9370002 296 10 0.9698246 348 10 0.9245185 207 10 0.8158065 206 10 0.7106518 115 10 0.3333333 10 1 0.7268519 169 6 0.517737 112 10 0.6862847 304 10 0.9604167 126 10 0.8762071 178 10 0.8673579 202 9 0.8462735 172 9 0.7945242 152 10 0.9527210 0.8228921 0.8133663 0.9535475 0.97347949 0.954028 0.8148515 0.8482300 0.9256156 0.8838356 0.9450760 0.0948845 0.9124247 0.969354 0.9536004 0.8979564 NA 0.9515131 0.9156048 0.9395182 0.9329733 0.9620998 0.937827 0.9805566 0.9571297 0.9545597 0.879898 0.9767327 0.9331856 0.9464138 0.9704131 0.9538554 0.8609861 0.8216728 NA 0.84140081 0.750905 0.8254372 0.9705033 0.8948496 0.9315075 0.8743674 0.8193330 4 0.9039882 0.9400983 -0.03792768 10 0.727741 0.6233650 0.1043760 0.99999906 0.02933981 weaklyHypometh 1.00000 1.00000 insignificant 9.9973e-01 0.01267189 weaklyHypometh 1.0000000 1.00000 insignificant -0.05205083 0.2801502 insignificant 1 insignificant 0.9042270 0.7783843 0.1253397 10 0.762778 0.545289 0.2174893 4.6378e-11 9.9999e-01 weaklyHypermeth 1.2883e-09 1.0000e+00 weaklyHypermeth 7.6932e-04 9.9999e-01 weaklyHypermeth 1.3264e-02 1.0000e+00 weaklyHypermeth 2.0239e-01 3.7845e-02 weaklyHypermeth 4.9150e-01 insignificant 0.9052694 0.8927711 0.0300672 10 0.9014650 0.8665519 0.03491316 6.9143e-02 9.9527e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.7107e-01 9.7054e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03478373 4.8204e-01 insignificant 1.000000 insignificant 0.9417824 0.7783843 1.6256e-01 10 0.7192673 0.545289 0.1739785 5.0923e-16 1.0000e+00 weaklyHypermeth 3.6374e-14 1.0000e+00 weaklyHypermeth 4.7820e-07 1.0000e+00 weaklyHypermeth 4.3473e-05 1.0000e+00 weaklyHypermeth 0.2544454 1.4528e-02 weaklyHypermeth 2.3060e-01 insignificant 0.941782 0.8927711 0.06177873 10 0.850043 0.8665519 -0.01650866 2.0380e-06 1.0000e+00 weaklyHypermeth 3.3967e-04 1.0000e+00 weaklyHypermeth 1.0243e-04 9.7232e-01 weaklyHypermeth 1.4632e-02 1.0000e+00 weaklyHypermeth 0.0172671 6.4450e-01 insignificant 1.0000000 insignificant 0.7826564 0.8925121 -0.07294425 10 0.708875 0.8532071 -0.1443316 9.6894e-01 2.8315e-03 weaklyHypometh 1.0000e+00 3.4530e-02 weaklyHypometh 9.7774e-01 4.6833e-02 weaklyHypometh 1.0000e+00 4.2192e-01 insignificant -0.2371783 1.9683e-02 weaklyHypometh 0.3071707 insignificant chr11 56828150 56829150 38665 APLNR ENSG00000134817 0.805556 20 2 0.797619 61 6 0.7714744 45 3 0.8958333 47 5 0.6820175 55 2 0.8288982 74 5 0.7109105 51 5 0.7088542 66 7 0.8206349 60 4 0.8482143 63 4 0.8408730 103 7 0.669231 30 2 0.8750000 57 4 0.860000 28 2 0.8255495 61 5 0.8125000 10 0 0.8779762 35 3 0.7500000 22 1 0.8650794 39 6 0.792208 72 6 0.9166667 41 3 0.7444444 18 1 0.779221 36 3 0.866667 31 3 0.8497324 137 5 0.8489011 106 6 0.736111 42 4 0.566071 23 3 0.685714 25 3 0.8377976 65 6 0.9916667 60 4 0.9404762 44 2 0.6792929 62 5 0.9030303 42 5 0.8305870 268 5 0.8333333 36 3 0.557589 66 4 0.6819805 59 4 0.7000000 6 0 0.8888889 9 0 0.8611111 25 2 1.0000000 32 5 0.6979167 22 0 0.8000000 0.7000000 0.6391667 0.8250000 0.63684211 0.729902 0.5888462 0.6875000 0.6288889 0.6875000 0.7508333 0.6453566 0.7000000 0.781510 0.7313187 0.7665104 0.7932961 0.7000000 0.7714286 0.8272727 0.8000000 0.6600000 0.686364 0.7600000 0.8100691 0.6826923 0.677778 0.4085714 0.6428571 0.7267857 0.9900000 0.9000000 0.5204545 0.8436364 0.69855379 1.00000000 0.649935 0.8510390 0.5500000 0.7145833 0.8000000 1.0000000 0.6750000 0 0.7667668 0.8389155 -0.01129424 4 0.752061 0.8753871 -0.1233264 0.89516667 0.71664975 lowCoverage 1.00000 1.00000 lowCoverage 9.4072e-01 0.43159319 lowCoverage 1.0000000 1.00000 lowCoverage -0.01170102 0.7579725 lowCoverage 1 lowCoverage 0.7667668 0.8396226 0.0090877 3 0.752061 0.713623 0.0384376 6.4391e-02 8.4846e-01 lowCoverage 4.1276e-01 1.0000e+00 lowCoverage 6.6979e-01 8.2871e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 5.4286e-02 3.6149e-01 lowCoverage 1.0000e+00 lowCoverage 0.7698492 0.8617021 -0.0949567 0 0.8460683 0.8384064 0.00766187 2.4425e-01 1.1169e-01 noCoverage 1.0000e+00 1.0000e+00 noCoverage 9.2476e-01 5.0990e-01 noCoverage 1.0000e+00 1.0000e+00 noCoverage -0.02766191 6.6636e-01 lowCoverage 1.000000 lowCoverage 0.8375796 0.8348968 2.0628e-02 5 0.7878484 0.642261 0.1455876 3.1501e-01 9.2490e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.1932e-01 9.5341e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0659869 3.2013e-01 lowCoverage 1.0000e+00 lowCoverage 0.838658 0.8617021 -0.08424180 0 0.859810 0.8384064 0.02140406 4.3701e-01 2.7790e-01 noCoverage 1.0000e+00 1.0000e+00 noCoverage 8.5921e-01 6.3407e-01 noCoverage 1.0000e+00 1.0000e+00 noCoverage -0.0159609 8.1980e-01 lowCoverage 1.0000000 lowCoverage 0.8412098 0.8617021 -0.10948445 0 0.802826 0.8384064 -0.0355804 9.2380e-01 5.5847e-02 noCoverage 1.0000e+00 3.9054e-01 noCoverage 9.3764e-01 5.3594e-01 noCoverage 1.0000e+00 1.0000e+00 noCoverage -0.0819478 3.2507e-01 lowCoverage 1.0000000 lowCoverage chr11 56834950 56835950 38666 APLNR ENSG00000134817 0.047851 656 17 0.106737 821 18 0.1121360 1048 18 0.0543427 590 16 0.0640032 626 17 0.1395905 837 19 0.1596795 831 17 0.0772301 747 17 0.0743513 1115 17 0.0639023 994 17 0.0795297 664 17 0.044300 1038 17 0.0401654 798 17 0.046875 448 13 0.0972620 986 17 0.0304190 1013 17 0.0365546 639 11 0.0675420 699 15 0.0124734 571 17 0.162299 718 19 0.0988038 288 17 0.1683979 482 16 0.144846 528 18 0.063211 457 18 0.0259882 405 14 0.0509697 859 18 0.089328 865 18 0.089732 574 17 0.014724 600 17 0.0391605 871 18 0.0270069 767 18 0.0936333 814 19 0.0027665 656 18 0.0020624 531 17 0.0000000 566 18 0.0526316 257 12 0.117808 304 18 0.0545025 748 18 0.1743839 842 18 0.1506063 696 17 0.1495989 635 16 0.1350709 595 16 0.0535435 520 17 0.0247114 0.0099108 0.0324395 0.0233199 0.01426936 0.050458 0.0229008 0.0175759 0.0132840 0.0167017 0.0267906 0.0218840 0.0242499 0.041486 0.0182107 0.0170612 0.0151000 0.0262961 0.0143633 0.0242400 0.0499328 0.0823547 0.047426 0.0224563 0.0088478 0.0069495 0.022108 0.0107224 0.0091948 0.0221006 0.0125452 0.0189966 0.0019694 0.0026854 0.00000000 0.00000000 0.038002 0.0053528 0.1317261 0.0647976 0.0798188 0.0834254 0.0667628 15 0.0302418 0.0375499 0.00088187 18 0.105505 0.0799210 0.0255844 0.26207973 0.67208111 insignificant 1.00000 1.00000 insignificant 3.9408e-01 0.96109817 insignificant 1.0000000 1.00000 insignificant 0.00037874 0.9821568 insignificant 1 insignificant 0.0302475 0.0107773 0.0272210 18 0.110093 0.082420 0.0276727 1.8674e-09 9.9999e-01 weaklyHypermeth 4.0595e-08 1.0000e+00 weaklyHypermeth 7.1857e-09 1.0000e+00 weaklyHypermeth 5.9881e-07 1.0000e+00 weaklyHypermeth 3.7567e-02 1.1620e-01 insignificant 1.0000e+00 insignificant 0.0300809 0.0918491 -0.0626721 17 0.1027205 0.1519861 -0.04926560 8.5450e-01 2.7810e-36 weaklyHypometh 1.0000e+00 2.7810e-33 weaklyHypometh 9.6583e-01 2.5948e-15 weaklyHypometh 1.0000e+00 2.5948e-12 weaklyHypometh -0.05677847 4.8693e-02 weaklyHypometh 0.954761 insignificant 0.0374417 0.0107773 2.6895e-02 18 0.0747002 0.082420 -0.0077198 8.6115e-05 1.0000e+00 weaklyHypermeth 1.1040e-03 1.0000e+00 weaklyHypermeth 7.3149e-06 9.9994e-01 weaklyHypermeth 4.3029e-04 1.0000e+00 weaklyHypermeth 0.0371883 1.4360e-01 insignificant 1.0000e+00 insignificant 0.037487 0.0918491 -0.05825112 17 0.081814 0.1519861 -0.07017161 9.9846e-01 5.9288e-19 weaklyHypometh 1.0000e+00 5.9288e-16 weaklyHypometh 9.8347e-01 6.0912e-11 weaklyHypometh 1.0000e+00 6.0912e-08 weaklyHypometh -0.0571572 5.2020e-02 insignificant 1.0000000 insignificant 0.0101340 0.0918491 -0.08178525 17 0.042650 0.1519861 -0.1093356 1.0000e+00 8.6076e-21 weaklyHypometh 1.0000e+00 4.3038e-18 weaklyHypometh 1.0000e+00 2.0681e-13 weaklyHypometh 1.0000e+00 2.0681e-10 weaklyHypometh -0.0943455 8.9716e-03 weaklyHypometh 0.1869086 insignificant chr11 56982350 56983350 38674 ENSG00000209782 0.074713 900 23 0.059998 1102 24 0.0373070 1143 25 0.0281984 858 19 0.0251070 811 22 0.0888951 813 23 0.0407306 1265 25 0.1245425 901 25 0.0662996 1202 26 0.0543813 1064 24 0.0718701 994 25 0.034711 1171 22 0.0432027 814 23 0.000000 70 1 0.0532660 1184 25 0.0172496 1114 25 0.0307691 2488 24 0.0572537 965 19 0.0733782 690 21 0.086963 948 23 0.0426760 330 21 0.0423491 486 15 0.060645 957 23 0.044574 494 26 0.0343915 378 17 0.0415845 1278 25 0.087729 667 21 0.031972 445 25 0.039242 803 24 0.0503883 1144 24 0.0531103 1210 24 0.0036227 1060 22 0.0314704 943 23 0.0467503 732 22 0.0221212 505 15 0.0453869 211 15 0.050867 476 28 0.0565890 1012 24 0.0482818 1187 20 0.0778320 1047 23 0.0251589 828 16 0.0520600 942 20 0.0662547 903 17 0.0202831 0.0065680 0.0123648 0.0108672 0.02123541 0.031785 0.0062674 0.0072846 0.0065877 0.0150719 0.0165977 0.0173770 0.0048644 NA 0.0086491 0.0209451 0.0275984 0.0056206 0.0229371 0.0230623 0.0137521 0.0117043 0.026368 0.0034751 0.0041288 0.0141559 0.012836 0.0077755 0.0187049 0.0085976 0.0223662 0.0105044 0.0149844 0.0052694 0.01610351 0.01506043 0.007717 0.0415869 0.0175820 0.0164172 0.0101266 0.0143672 0.0174832 16 0.0138557 0.0177259 0.00335974 24 0.082209 0.0420407 0.0401688 0.00035578 0.99972820 weaklyHypermeth 0.17789 1.00000 insignificant 1.5861e-03 0.99983687 weaklyHypermeth 0.5286925 1.00000 insignificant 0.00908466 0.2982834 insignificant 1 insignificant 0.0138557 0.0237175 -0.0011398 24 0.082209 0.050978 0.0312312 8.1811e-02 4.6021e-01 insignificant 5.0191e-01 1.0000e+00 insignificant 7.3017e-02 9.9685e-01 insignificant 5.2911e-01 1.0000e+00 insignificant 1.1244e-02 1.9248e-01 insignificant 1.0000e+00 insignificant 0.0133946 0.0201753 -0.0027431 20 0.0609810 0.0539525 0.00702852 3.0665e-01 2.5586e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.0848e-01 6.7192e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00047571 9.6647e-01 insignificant 1.000000 insignificant 0.0177259 0.0237175 -4.1806e-03 25 0.0420407 0.050978 -0.0089375 7.9019e-01 1.1306e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.8869e-01 7.1453e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0021596 7.8368e-01 insignificant 1.0000e+00 insignificant 0.017462 0.0201753 -0.00534735 20 0.041188 0.0539525 -0.01276454 9.4543e-01 2.6554e-03 weaklyHypometh 1.0000e+00 1.7243e-01 insignificant 9.9064e-01 1.5938e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0095604 3.9313e-01 insignificant 1.0000000 insignificant 0.0233342 0.0201753 -0.00136729 20 0.049947 0.0539525 -0.0040058 6.1585e-01 3.5476e-02 weaklyHypometh 1.0000e+00 2.6436e-01 insignificant 9.8628e-01 2.9967e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0117200 2.9654e-01 insignificant 1.0000000 insignificant chr11 57023650 57024650 38677 RTN4RL2 ENSG00000186907 0.032289 510 17 0.034723 582 18 0.0213561 715 18 0.0124360 518 17 0.0243921 442 17 0.0864021 915 18 0.0212728 703 18 0.0125079 591 18 0.1067362 896 18 0.0181071 916 17 0.0354694 632 18 0.018714 663 18 0.0224904 757 18 0.016204 402 11 0.0340387 975 18 0.1065009 643 18 0.0090968 385 18 0.0664290 504 15 0.0184921 394 17 0.063084 780 16 0.0876228 242 16 0.0740328 561 15 0.043605 466 17 0.054340 310 17 0.0669048 297 14 0.0655210 829 18 0.062606 560 16 0.027722 362 20 0.077614 420 18 0.0320695 752 18 0.0664226 724 18 0.0538539 853 18 0.0674483 593 18 0.0401809 328 18 0.0887701 455 13 0.0000000 110 9 0.108158 328 16 0.0110357 564 18 0.0170918 705 18 0.0127875 585 18 0.0120469 505 17 0.0211143 499 15 0.0254957 602 17 0.0339498 0.0442617 0.0209950 0.0156407 0.02038725 0.047699 0.0246989 0.0105983 0.0140514 0.0199982 0.0327359 0.0171754 0.0219219 0.016657 0.0364772 0.0537900 0.0086216 0.0131904 0.0203117 0.0280106 0.0519209 0.0247370 0.040908 0.0349977 0.0457189 0.0123922 0.033618 0.0321905 0.0310159 0.0301344 0.0138327 0.0257082 0.0119303 0.0383004 0.08025365 0.00000000 0.044301 0.0123068 0.0181443 0.0128546 0.0132759 0.0153108 0.0242673 14 0.0221311 0.0269762 -0.00247312 18 0.088322 0.0641749 0.0241472 0.91028046 0.22540639 insignificant 1.00000 1.00000 insignificant 8.4688e-01 0.12421381 insignificant 1.0000000 1.00000 insignificant -0.02132235 0.0192550 weaklyHypometh 1 insignificant 0.0219797 0.0206056 0.0032818 18 0.048684 0.097829 -0.0491451 3.8935e-01 8.0273e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.6587e-01 9.2020e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -1.4562e-02 4.6705e-01 insignificant 1.0000e+00 insignificant 0.0215604 0.0124309 0.0066612 17 0.0260655 0.0169607 0.00910475 2.0725e-01 2.6039e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.5939e-01 4.1672e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02032990 1.0996e-02 weaklyHypermeth 0.343637 insignificant 0.0269931 0.0206056 6.8302e-03 18 0.0669651 0.097829 -0.0308638 1.1967e-01 9.7739e-01 insignificant 7.2761e-01 1.0000e+00 insignificant 1.1481e-01 9.8387e-01 insignificant 8.0855e-01 1.0000e+00 insignificant 0.0067607 7.2504e-01 insignificant 1.0000e+00 insignificant 0.025625 0.0124309 0.00847407 17 0.030011 0.0169607 0.01305017 5.1413e-02 9.0375e-01 insignificant 9.1809e-01 1.0000e+00 insignificant 6.0998e-02 8.4628e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0416523 3.5249e-06 weaklyHypermeth 0.0035249 weaklyHypermeth 0.0190597 0.0124309 0.00546691 17 0.022623 0.0169607 0.0056619 7.9610e-01 6.6241e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.5888e-01 6.9918e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0348915 1.0429e-01 insignificant 0.9776823 insignificant chr11 60584550 60585550 38731 ENSG00000207153 0.904200 330 7 0.881194 497 7 0.8704220 171 7 0.9384492 291 7 0.8225185 135 7 0.9121508 478 7 0.8704915 94 5 0.7630315 252 7 0.8965042 209 7 0.9242005 105 5 0.9174966 419 7 0.928571 46 3 0.8563954 252 7 0.829001 170 7 0.8590634 250 7 0.6142857 50 5 0.0000000 2 0 0.8153503 312 7 0.8499206 267 6 0.776136 370 7 0.7662377 74 5 0.8742626 124 5 0.906557 189 7 0.858167 186 7 0.8802363 62 4 0.8893742 422 7 0.885259 172 7 0.827730 111 7 0.901100 231 7 0.9042889 555 7 0.9142006 436 7 0.8571879 353 7 0.8332568 226 7 0.8672278 98 5 0.8168731 257 3 0.7777778 12 0 0.760118 314 7 0.8312893 340 7 0.9473241 188 5 0.9407507 294 7 0.9607705 250 6 0.7651896 187 6 0.9458158 247 7 0.9166655 0.8597740 0.8577495 0.9251555 0.79008470 0.920718 0.8178541 0.8660052 0.9019262 0.8945897 0.8896524 0.9293023 0.8433662 0.833423 0.8546597 0.8539535 NA 0.7961351 0.8425349 0.8906805 0.8675217 0.8569066 0.921929 0.8136604 0.9168736 0.8741862 0.874977 0.8075630 0.8981067 0.8951052 0.9161077 0.9136858 0.8561032 0.8535724 0.84391355 0.70470842 0.782835 0.8775271 0.9319583 0.9366461 0.9474497 0.8760400 0.9301735 4 0.8733504 0.8850772 -0.00838987 7 0.865245 0.8537751 0.0114695 0.76632430 0.45566172 insignificant 1.00000 1.00000 insignificant 9.5585e-01 0.14581850 insignificant 1.0000000 1.00000 insignificant -0.06058104 0.2147317 insignificant 1 insignificant 0.8734555 0.8211708 0.0564632 7 0.881708 0.802285 0.0794236 7.8215e-06 6.2484e-01 weaklyHypermeth 1.0861e-04 1.0000e+00 weaklyHypermeth 1.0495e-01 3.8327e-01 insignificant 7.3390e-01 1.0000e+00 insignificant -2.9547e-03 9.5203e-01 lowCoverage 1.0000e+00 lowCoverage 0.8733504 0.9210978 -0.0532359 7 0.8652446 0.8628520 0.00239266 9.9823e-01 7.0124e-04 weaklyHypometh 1.0000e+00 6.3749e-02 weaklyHypometh 9.9995e-01 6.6678e-05 weaklyHypometh 1.0000e+00 1.6670e-02 weaklyHypometh -0.10050104 1.0542e-01 insignificant 1.000000 insignificant 0.8855670 0.8211708 6.8842e-02 7 0.8900287 0.802285 0.0877441 9.4318e-07 5.5174e-01 weaklyHypermeth 1.9249e-05 1.0000e+00 weaklyHypermeth 2.8573e-02 6.7523e-01 weaklyHypermeth 2.5975e-01 1.0000e+00 insignificant 0.0576264 1.5539e-02 lowCoverage 2.4280e-01 lowCoverage 0.885077 0.9210978 -0.04727032 7 0.853775 0.8628520 -0.00907685 9.9604e-01 6.5786e-03 weaklyHypometh 1.0000e+00 3.6548e-01 insignificant 9.9945e-01 8.1522e-03 weaklyHypometh 1.0000e+00 6.7935e-01 insignificant -0.0399200 3.5127e-01 insignificant 1.0000000 insignificant 0.8211708 0.9226139 -0.09094861 7 0.802285 0.9384975 -0.1362129 9.9997e-01 1.6999e-06 weaklyHypometh 1.0000e+00 6.0709e-05 weaklyHypometh 9.9957e-01 5.4136e-04 weaklyHypometh 1.0000e+00 2.0822e-02 weaklyHypometh -0.0975464 5.5042e-02 lowCoverage 0.6284019 lowCoverage chr11 60805650 60806650 38736 ENSG00000172647 0.022917 228 9 0.015526 186 10 0.0054054 336 10 0.0066667 266 8 0.0410187 260 10 0.0045935 265 9 0.0279969 312 10 0.0038462 166 10 0.0324603 215 10 0.0362439 215 10 0.0388007 315 10 0.046821 293 10 0.0106477 336 10 NA 0 0 0.0214018 388 10 0.0130979 371 10 0.0544510 270 10 0.0358390 232 9 0.0265152 236 10 0.028448 228 10 0.0341667 109 10 0.1111111 157 6 0.018882 176 9 0.025196 167 9 0.0290711 135 6 0.0140714 320 10 0.025833 123 10 0.033333 92 8 0.017857 125 10 0.0000000 207 10 0.0000000 260 10 0.1137800 344 10 0.0456674 178 9 0.0054167 211 10 0.0000000 254 7 0.0321022 111 6 0.016667 57 7 0.2099561 156 10 0.0856917 346 9 0.0228571 314 9 0.0105485 288 6 0.2095960 201 6 0.0576364 314 9 0.0186782 0.0243359 0.0080488 0.0058516 0.06573252 0.011664 0.0441182 0.0135037 0.0351794 0.0420000 0.0516284 0.0528164 0.0135568 NA 0.0416954 0.0198323 0.0765834 0.0480645 0.0415598 0.0288946 0.0285266 0.0188088 0.025305 0.0372823 0.0261913 0.0233612 0.021160 0.0485741 0.0111957 0.0000000 0.0000000 0.0382097 0.0568415 0.0079415 0.00000000 0.04744702 0.026123 0.1509239 0.0303751 0.0291387 0.0084289 0.0674931 0.0476580 5 0.0265729 0.0180914 0.01046243 10 0.026127 0.0175325 0.0085947 0.07349233 0.92794953 insignificant 1.00000 1.00000 insignificant 4.3508e-02 0.99321133 weaklyHypermeth 1.0000000 1.00000 insignificant -0.01039632 0.3794779 insignificant 1 insignificant 0.0265729 0.0506722 -0.0230931 10 0.026127 0.047950 -0.0218223 9.3029e-01 3.3631e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 6.6164e-01 5.4080e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -2.6756e-02 4.4826e-01 insignificant 1.0000e+00 insignificant 0.0265729 0.0396446 -0.0093813 8 0.0261273 0.0672640 -0.04113676 5.8809e-01 6.0105e-04 weaklyHypometh 1.0000e+00 6.1411e-02 weaklyHypometh 6.7827e-01 1.6488e-02 weaklyHypometh 1.0000e+00 6.1056e-01 insignificant -0.05238716 2.1583e-01 insignificant 1.000000 insignificant 0.0180914 0.0506722 -3.2363e-02 10 0.0175325 0.047950 -0.0304170 9.9488e-01 3.4182e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.6878e-01 1.3621e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0163597 6.4881e-01 insignificant 1.0000e+00 insignificant 0.018091 0.0396446 -0.02386033 8 0.017533 0.0672640 -0.04973147 9.1434e-01 6.8679e-04 weaklyHypometh 1.0000e+00 6.2435e-02 weaklyHypometh 9.7509e-01 7.6366e-03 weaklyHypometh 1.0000e+00 6.7935e-01 insignificant -0.0419908 3.1315e-01 insignificant 1.0000000 insignificant 0.0506722 0.0396446 -0.00017422 8 0.047950 0.0672640 -0.0193145 4.1947e-01 4.3424e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.7864e-01 2.0298e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0256311 6.0799e-01 insignificant 1.0000000 insignificant chr11 61212250 61213250 38743 DAGLA ENSG00000134780 0.844038 184 8 0.854095 363 13 0.7199196 276 10 0.8504574 141 7 0.8501950 244 13 0.8468018 254 9 0.8369954 319 13 0.8425994 300 13 0.8599805 275 10 0.9194187 268 10 0.8477561 421 13 0.827865 166 9 0.8704975 332 10 0.895503 80 6 0.8558705 292 10 0.7648485 144 9 0.6900042 1341 9 0.8047975 119 7 0.8313231 296 8 0.866277 171 9 0.6147209 93 5 0.8086174 66 6 0.883880 222 13 0.952681 92 10 0.8933605 194 9 0.8542193 504 13 0.900980 160 10 0.756349 104 9 0.870633 285 12 0.8842573 456 13 0.8559766 471 13 0.8513094 279 10 0.2770815 441 13 0.2633917 263 10 0.2543258 346 13 0.3676768 155 10 0.252289 194 12 0.3649380 373 10 0.8666979 157 7 0.8736901 179 10 0.8762702 160 7 0.8035041 115 6 0.6358225 203 7 0.8124457 0.7674806 0.7855777 0.8538491 0.81461815 0.859410 0.7990870 0.8422536 0.8637353 0.9052175 0.8196756 0.8526473 0.8314723 0.861210 0.7947142 0.8270713 0.6629237 0.7704376 0.8531379 0.8372425 0.7324808 0.8478946 0.839279 0.9131185 0.8561442 0.8172925 0.867385 0.7202707 0.8252827 0.8671316 0.8240785 0.8067218 0.5193326 0.4976448 0.48689557 0.60041763 0.411179 0.6084912 0.8229503 0.7970038 0.8584060 0.7913320 0.7954775 6 0.8003675 0.8571429 -0.02453449 10 0.822365 0.8711006 -0.0487361 0.97388339 0.00085921 weaklyHypometh 1.00000 0.42960 insignificant 8.0801e-01 0.28723237 insignificant 1.0000000 1.00000 insignificant -0.00995324 0.7255723 insignificant 1 insignificant 0.8003675 0.2666667 0.4919343 10 0.822365 0.264359 0.5580054 1.9284e-96 9.9993e-01 hypermethylated 1.9284e-93 1.0000e+00 hypermethylated 6.4423e-23 1.0000e+00 hypermethylated 6.4423e-20 1.0000e+00 hypermethylated 5.3734e-01 1.9805e-08 hypermethylated 2.8292e-06 hypermethylated 0.8003344 0.8169533 -0.0190553 7 0.8215208 0.7851085 0.03641230 2.4193e-01 7.5695e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 5.9284e-01 3.2389e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02276517 6.5320e-01 insignificant 1.000000 insignificant 0.8568983 0.2669300 5.6018e-01 13 0.8247130 0.293814 0.5308988 7.7548e-81 1.0000e+00 hypermethylated 7.7548e-78 1.0000e+00 hypermethylated 3.7460e-18 1.0000e+00 hypermethylated 3.7460e-15 1.0000e+00 hypermethylated 0.5472982 7.0457e-11 hypermethylated 7.0457e-08 hypermethylated 0.857094 0.8169533 0.01284730 7 0.861185 0.7851085 0.07607679 9.5749e-03 5.2409e-01 weaklyHypermeth 2.3937e-01 1.0000e+00 insignificant 2.9195e-01 4.5583e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0327184 5.5254e-01 insignificant 1.0000000 insignificant 0.2668174 0.8169533 -0.34797638 7 0.284694 0.7851085 -0.5004140 9.9978e-01 1.1281e-24 hypomethylated 1.0000e+00 1.1281e-21 hypomethylated 9.9992e-01 9.9399e-12 hypomethylated 1.0000e+00 4.9699e-09 hypomethylated -0.5145798 6.3784e-05 hypomethylated 0.0091120 hypomethylated chr11 61219050 61220050 38744 DAGLA ENSG00000134780 0.677355 102 5 0.475192 363 6 0.5824613 257 6 0.7278912 88 4 0.5746727 251 6 0.6492013 163 6 0.6428364 286 6 0.6321490 170 6 0.5689928 228 6 0.7212745 166 6 0.5845679 247 6 0.687762 172 6 0.3922711 168 6 0.562500 80 4 0.5739270 231 6 0.7477918 156 6 0.5281307 69 2 0.5034135 157 5 0.4695436 266 6 0.634789 198 6 0.6763391 74 6 0.5698068 89 4 0.654838 118 6 0.632618 124 6 0.5383333 38 4 0.5697643 295 6 0.574039 147 6 0.650130 144 6 0.564174 290 6 0.5310338 339 6 0.5790158 325 6 0.7322341 242 6 0.2218444 261 6 0.1608837 252 6 0.0580986 340 6 0.4583333 21 3 0.204926 215 6 0.3793513 314 6 0.7254055 180 5 0.6736659 201 6 0.4488636 61 4 0.7271605 95 4 0.4993614 97 4 0.6749185 0.4345863 0.5161732 0.5830936 0.52909385 0.571205 0.5848501 0.6382796 0.4888730 0.6853386 0.5338957 0.6621525 0.3714637 0.606283 0.5205548 0.7767338 0.5435488 0.5981272 0.4171456 0.5853431 0.5344237 0.5092476 0.642707 0.7454261 0.4709943 0.5283722 0.541335 0.5636633 0.4766565 0.5174391 0.5258925 0.6700202 0.1842611 0.1801866 0.02801541 0.41566292 0.291976 0.4786757 0.6133731 0.5225839 0.3514465 0.6268705 0.6428052 4 0.5539550 0.5438596 -0.01252468 6 0.648470 0.6108909 0.0375787 0.74880626 0.46956979 insignificant 1.00000 1.00000 insignificant 7.1798e-01 0.70798296 insignificant 1.0000000 1.00000 insignificant -0.00919107 0.7412620 insignificant 1 insignificant 0.5539550 0.2154066 0.3430817 6 0.648470 0.190162 0.4583079 1.1638e-23 1.0000e+00 hypermethylated 1.1473e-21 1.0000e+00 hypermethylated 7.4306e-11 1.0000e+00 hypermethylated 2.4769e-08 1.0000e+00 hypermethylated 3.4960e-01 1.2965e-03 weaklyHypermeth 3.8131e-02 weaklyHypermeth 0.5539550 0.5752773 -0.0133990 4 0.6484696 0.6246607 0.02380892 5.5280e-01 8.8912e-04 lowCoverage 1.0000e+00 7.4094e-02 lowCoverage 4.7743e-01 2.8268e-02 lowCoverage 1.0000e+00 8.8338e-01 lowCoverage -0.01805527 7.8394e-01 lowCoverage 1.000000 lowCoverage 0.5438202 0.2152530 3.3856e-01 6 0.5970295 0.166392 0.4306380 1.5711e-17 1.0000e+00 hypermethylated 1.3092e-15 1.0000e+00 hypermethylated 1.2033e-08 1.0000e+00 hypermethylated 2.0055e-06 1.0000e+00 hypermethylated 0.3587876 1.2824e-03 weaklyHypermeth 3.8340e-02 weaklyHypermeth 0.543820 0.5757098 -0.00855772 4 0.597030 0.6299114 -0.03288189 8.8597e-01 2.0217e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.3146e-01 3.3312e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0088642 8.9126e-01 lowCoverage 1.0000000 lowCoverage 0.2152530 0.5757098 -0.33785035 4 0.166392 0.6299114 -0.4635199 1.0000e+00 1.6443e-12 lowCoverage 1.0000e+00 1.6443e-10 lowCoverage 1.0000e+00 3.1465e-06 lowCoverage 1.0000e+00 4.5568e-04 lowCoverage -0.3676518 1.8105e-03 lowCoverage 0.0724211 lowCoverage chr11 61223450 61224450 38746 DAGLA ENSG00000134780 0.840804 148 9 0.857864 63 6 0.8726190 57 6 0.8261905 178 9 0.6666667 17 1 0.4442356 57 3 0.6481481 21 0 0.8058201 92 6 0.8684371 56 6 0.6533333 12 1 0.8823824 173 8 0.736111 35 4 0.9053060 174 9 0.774603 33 3 0.8765873 71 9 NA 0 0 0.9444444 13 0 0.3852814 90 3 0.8500000 29 3 0.817492 144 9 0.9629630 75 7 0.9628968 115 9 0.876950 181 7 0.732601 68 7 0.8521368 24 2 0.5868814 88 4 0.457949 53 3 0.416667 12 1 0.481169 53 3 0.8203518 86 3 0.6062610 78 3 0.8904605 56 3 0.6510638 107 9 0.6618850 107 9 0.6666667 36 1 0.2857143 7 1 0.460476 39 3 0.5270833 84 4 0.7424242 82 7 0.9682900 151 9 0.8474747 111 7 0.8804029 113 7 0.7031250 29 3 0.9201885 0.8487554 0.6733631 0.9181548 0.83560142 0.782758 0.4062500 0.9843750 0.8571429 0.6645833 0.9176813 0.4744903 0.8885943 0.842262 0.9677083 NA 0.9218750 0.8388573 0.9312500 0.8936121 0.9618056 0.9492188 0.781250 0.8114698 0.8020833 0.8922969 0.825389 0.6333136 0.8915381 0.9104584 0.9618882 0.9143503 0.4979620 0.8514881 0.64072334 0.37801711 0.800372 0.5805990 0.8802083 0.9012108 0.9000000 0.9322917 0.7122396 1 0.8707250 0.8661417 -0.01104136 6 0.727625 0.8113936 -0.0837691 0.92894236 0.49689467 insignificant 1.00000 1.00000 insignificant 8.7901e-01 0.56162239 insignificant 1.0000000 1.00000 insignificant 0.05077842 0.4633435 lowCoverage 1 lowCoverage 0.8724280 0.6789474 0.2171245 3 0.839816 0.687170 0.1526464 1.7429e-10 9.5109e-01 lowCoverage 4.7105e-09 1.0000e+00 lowCoverage 3.6251e-04 9.6924e-01 lowCoverage 7.2502e-03 1.0000e+00 lowCoverage 2.2924e-01 1.1142e-02 lowCoverage 1.9897e-01 lowCoverage 0.8724280 0.9237113 -0.0277323 7 0.8398161 0.8926830 -0.05286688 9.0148e-01 1.6091e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.0604e-01 1.6238e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.05695778 3.6100e-01 lowCoverage 1.000000 lowCoverage 0.8669673 0.6789474 2.0427e-01 3 0.8736723 0.687170 0.1865027 2.6977e-07 8.7768e-01 lowCoverage 5.9948e-06 1.0000e+00 lowCoverage 9.0562e-03 9.7491e-01 lowCoverage 1.0781e-01 1.0000e+00 lowCoverage 0.1784590 5.5349e-02 lowCoverage 6.5116e-01 lowCoverage 0.866967 0.9237113 -0.00960694 6 0.873672 0.8926830 -0.01901062 8.2807e-01 3.4717e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.7528e-01 4.7308e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.1077362 1.7520e-01 lowCoverage 1.0000000 lowCoverage 0.6789474 0.9237113 -0.24577000 3 0.687170 0.8926830 -0.2055133 9.8897e-01 1.5258e-05 lowCoverage 1.0000e+00 4.3595e-04 lowCoverage 9.8960e-01 9.5807e-04 lowCoverage 1.0000e+00 3.0596e-02 lowCoverage -0.2861952 5.3698e-03 lowCoverage 0.1451288 lowCoverage chr11 61252550 61253550 38747 DAGLA ENSG00000134780 0.890215 134 7 0.829790 160 7 0.7689477 174 7 0.8856959 103 5 0.8869281 106 6 0.8833859 185 7 0.7768106 170 6 0.9538690 100 6 0.8393445 116 6 0.9372354 152 6 0.8847478 207 7 0.818660 81 6 0.8381122 132 6 0.968750 32 1 0.8036043 158 6 0.6813665 88 5 0.7227273 61 5 0.6390550 119 6 0.7665473 166 6 0.903272 211 7 0.7869100 102 6 0.9463710 56 4 0.877761 164 6 0.877581 83 6 0.7541667 30 3 0.9112370 168 6 0.924862 161 6 0.809256 100 6 0.727895 137 6 0.9109684 163 7 0.9015098 152 7 0.8891724 246 6 0.6554825 165 7 0.7837485 137 5 0.8758272 174 4 0.6888889 25 2 0.754607 100 6 0.4947105 168 7 0.9114245 175 7 0.8907376 174 7 0.9233515 108 4 0.8908333 137 5 0.8040110 100 4 0.8772355 0.8569290 0.8435009 0.9276362 0.90039524 0.878823 0.9081954 0.9614342 0.9766538 0.9377046 0.9217122 0.8501035 0.8694974 NA 0.9336094 0.9121329 0.9001440 0.7485280 0.9442092 0.9218417 0.8994406 0.9033513 0.858238 0.9068756 0.9280960 0.9130281 0.893502 0.9459981 0.7771705 0.9236440 0.8973807 0.8791572 0.7022747 0.9267258 0.84501806 0.80633866 0.816903 0.7452290 0.9019623 0.9263617 0.8983555 0.8906249 0.8983823 3 0.8896422 0.8898848 0.00105187 6 0.790970 0.8213014 -0.0303310 0.74983280 0.10778145 insignificant 1.00000 1.00000 insignificant 5.9908e-01 0.47269165 insignificant 1.0000000 1.00000 insignificant -0.02585427 0.3746109 insignificant 1 insignificant 0.8896422 0.7308192 0.1673507 6 0.790970 0.588726 0.2022442 3.2263e-15 7.4251e-01 weaklyHypermeth 1.5607e-13 1.0000e+00 weaklyHypermeth 1.8931e-03 7.0554e-01 weaklyHypermeth 2.9580e-02 1.0000e+00 weaklyHypermeth 1.2508e-01 6.6399e-02 insignificant 7.5454e-01 insignificant 0.8929652 0.8890490 0.0034629 5 0.8784781 0.9066817 -0.02820360 9.7925e-02 1.0657e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.9663e-01 7.0254e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.05011834 1.0709e-01 insignificant 1.000000 insignificant 0.8898848 0.7308192 1.6407e-01 6 0.8213014 0.588726 0.2325752 1.0670e-08 9.8982e-01 weaklyHypermeth 3.5567e-07 1.0000e+00 weaklyHypermeth 2.4456e-03 9.8417e-01 weaklyHypermeth 3.6699e-02 1.0000e+00 weaklyHypermeth 0.1509301 3.5098e-02 weaklyHypermeth 4.4997e-01 insignificant 0.892674 0.8890490 -0.00403867 5 0.903131 0.9066817 -0.00355096 4.2900e-01 1.7688e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.9192e-01 1.3287e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0242641 4.2698e-01 insignificant 1.0000000 insignificant 0.7314211 0.8890490 -0.14561004 5 0.599817 0.9066817 -0.3068647 9.7624e-01 4.7330e-05 weaklyHypometh 1.0000e+00 1.0757e-03 weaklyHypometh 9.9619e-01 2.0676e-02 weaklyHypometh 1.0000e+00 2.3567e-01 insignificant -0.1751942 1.9966e-02 weaklyHypometh 0.3071707 insignificant chr11 61364850 61365850 38754 FADS2 ENSG00000134824 0.786554 171 6 0.665975 134 6 0.4961905 53 3 0.7900299 142 5 0.5833333 39 2 0.7109751 239 6 0.6888889 62 4 0.7152778 64 3 0.5777778 54 3 0.8138533 52 5 0.7149711 126 5 0.731969 42 2 0.7123188 71 5 0.809524 15 2 0.7066667 50 3 0.7179487 28 2 0.4227273 28 2 0.6694017 156 6 0.6238095 81 4 0.745594 194 6 0.6616883 34 4 0.7606838 53 5 0.747044 86 5 0.754167 47 3 0.8182796 69 3 0.7471997 157 5 0.475379 29 3 0.807516 40 2 0.572529 118 6 0.6957419 169 5 0.7525613 193 5 0.7161208 224 6 0.6966747 104 5 0.5724638 64 3 0.4612479 103 4 0.6666667 29 2 0.544000 71 3 0.7087059 191 5 0.8489318 159 6 0.7711081 171 6 0.7799020 157 5 0.8263019 107 6 0.7975868 190 5 0.7210317 0.6197006 0.5560847 0.7152071 0.50925926 0.674773 0.5827160 0.7700617 0.7518519 0.8245885 0.7066338 0.7071692 0.7024960 0.724868 0.5345679 0.5884301 0.7767677 0.6645679 0.8280423 0.7223502 0.6235690 0.6980057 0.606276 0.5265432 0.6500199 0.7505962 0.582211 0.6846768 0.5936548 0.6475925 0.7351631 0.7414732 0.5757110 0.5735373 0.63697582 0.51851852 0.544198 0.6062080 0.7133751 0.7220187 0.7111111 0.7733377 0.6909650 2 0.6962798 0.7038556 -0.00039412 5 0.697933 0.7011863 -0.0032534 0.63291765 0.30728924 insignificant 1.00000 1.00000 insignificant 5.9683e-01 0.12596662 insignificant 1.0000000 1.00000 insignificant -0.02488655 0.5002606 lowCoverage 1 lowCoverage 0.6962798 0.6227758 0.0790705 5 0.697933 0.623998 0.0739347 9.9175e-04 9.8869e-01 weaklyHypermeth 9.1829e-03 1.0000e+00 weaklyHypermeth 5.3886e-03 9.9456e-01 weaklyHypermeth 6.9982e-02 1.0000e+00 weaklyHypermeth 7.5896e-02 1.3614e-01 lowCoverage 1.0000e+00 lowCoverage 0.6962798 0.7589286 -0.0604806 5 0.6979330 0.7965607 -0.09862774 9.9986e-01 1.7959e-03 weaklyHypometh 1.0000e+00 1.2337e-01 insignificant 9.9997e-01 4.5721e-03 weaklyHypometh 1.0000e+00 3.0481e-01 insignificant -0.12057679 2.0504e-04 lowCoverage 0.025630 lowCoverage 0.7038556 0.6227758 8.1072e-02 5 0.7011863 0.623998 0.0771881 2.0773e-04 9.9880e-01 weaklyHypermeth 2.3606e-03 1.0000e+00 weaklyHypermeth 5.2850e-04 9.9751e-01 weaklyHypermeth 1.2011e-02 1.0000e+00 weaklyHypermeth 0.1007827 6.7349e-02 lowCoverage 7.2849e-01 lowCoverage 0.703856 0.7589286 -0.05952616 5 0.701186 0.7965607 -0.09537435 9.9981e-01 5.9579e-04 weaklyHypometh 1.0000e+00 5.9579e-02 weaklyHypometh 9.9036e-01 1.3284e-02 weaklyHypometh 1.0000e+00 9.4886e-01 insignificant -0.0956902 9.1959e-03 lowCoverage 0.5108832 lowCoverage 0.6227758 0.7589286 -0.13566040 5 0.623998 0.7965607 -0.1725624 1.0000e+00 5.9707e-07 weaklyHypometh 1.0000e+00 2.5959e-05 weaklyHypometh 1.0000e+00 6.6463e-05 weaklyHypometh 1.0000e+00 5.5386e-03 weaklyHypometh -0.1964729 3.3033e-03 lowCoverage 0.1032268 lowCoverage chr11 61367250 61368250 38755 FADS2 ENSG00000134824 0.675599 120 6 0.627414 133 7 0.5466009 61 4 0.6574713 108 6 0.5273504 53 7 0.5896929 205 7 0.7647569 76 6 0.7318182 80 8 0.6312500 84 7 0.6652778 50 3 0.7199790 150 7 0.673295 34 2 0.6498264 95 8 0.670899 51 6 0.6943651 75 7 0.7222222 32 4 0.8177083 29 2 0.7572621 154 6 0.7020896 94 7 0.687021 222 7 0.6875000 64 2 0.6984127 15 1 0.598535 104 5 0.780804 60 5 0.7638889 66 3 0.6690810 120 7 0.539338 70 6 0.418627 45 2 0.752697 79 7 0.6683179 109 8 0.6665727 128 7 0.6906807 141 7 0.7246961 118 8 0.6034341 73 7 0.6009007 162 8 0.5500000 20 0 0.620860 135 5 0.6456245 109 7 0.6668398 85 4 0.7971429 120 6 0.6596673 90 6 0.6020408 81 4 0.6918934 98 6 0.7184184 0.6624376 0.5616284 0.6732980 0.52782709 0.652626 0.7542735 0.7516608 0.6703526 0.6677350 0.7228701 0.6660839 0.6816239 0.753658 0.7243361 0.7232906 0.6951199 0.7333541 0.7681325 0.7200247 0.7211538 0.6192575 0.628793 0.7465659 0.7704327 0.6859574 0.566968 0.6092238 0.7949404 0.7048165 0.6909100 0.7150462 0.7325177 0.6573859 0.53945529 0.72064325 0.618970 0.6612967 0.7469814 0.7547756 0.7317700 0.7156593 0.7606838 1 0.7266527 0.7282717 0.01405710 7 0.683096 0.6717279 0.0113681 0.28391869 0.85137610 insignificant 1.00000 1.00000 insignificant 4.5287e-01 0.43515230 insignificant 1.0000000 1.00000 insignificant 0.01439039 0.6714137 insignificant 1 insignificant 0.7266527 0.6855754 0.0459397 7 0.683096 0.639311 0.0437851 2.4071e-02 9.4228e-01 weaklyHypermeth 1.6854e-01 1.0000e+00 insignificant 2.0663e-01 9.3958e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.1342e-02 1.0324e-01 insignificant 1.0000e+00 insignificant 0.7266527 0.7004219 -0.0349505 6 0.6830960 0.6974023 -0.01430640 8.8552e-01 9.9343e-03 weaklyHypometh 1.0000e+00 3.5480e-01 insignificant 9.2156e-01 5.5281e-03 weaklyHypometh 1.0000e+00 3.3249e-01 insignificant -0.00792188 8.3150e-01 insignificant 1.000000 insignificant 0.7282717 0.6855754 3.4334e-02 7 0.6717279 0.639311 0.0324170 1.3074e-01 7.5302e-01 insignificant 7.7363e-01 1.0000e+00 insignificant 2.1220e-01 8.5285e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0369520 3.4373e-01 insignificant 1.0000e+00 insignificant 0.728272 0.7004219 -0.04439527 6 0.671728 0.6974023 -0.02567446 8.2786e-01 2.9434e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 6.5904e-01 5.4694e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0223123 6.1779e-01 insignificant 1.0000000 insignificant 0.6855754 0.7004219 -0.08909596 6 0.639311 0.6974023 -0.0580915 9.7854e-01 7.8537e-03 weaklyHypometh 1.0000e+00 7.9331e-02 weaklyHypometh 9.8481e-01 6.0052e-03 weaklyHypometh 1.0000e+00 1.0535e-01 insignificant -0.0592643 1.7685e-01 insignificant 1.0000000 insignificant chr11 61383250 61384250 38756 FADS2 ENSG00000134824 0.973718 118 5 0.836758 180 5 0.8502778 90 5 0.9682075 200 5 0.8019951 71 5 0.9192618 221 5 0.9037391 140 5 0.9809368 99 5 0.9652539 84 5 0.8333333 27 3 0.9390379 221 5 0.976471 30 2 0.9482353 38 3 0.766228 42 3 0.9742327 53 3 0.9523810 30 3 1.0000000 5 0 0.8975884 122 5 0.9269951 132 5 0.978739 106 5 0.9365079 73 5 1.0000000 24 2 0.981439 97 5 0.837750 50 4 0.9535348 183 5 0.9567687 187 5 0.917000 72 5 1.000000 34 3 0.763868 116 5 0.9633933 200 5 0.9811084 219 5 0.9494313 155 5 0.9045721 142 5 0.8842792 146 5 0.9506338 130 4 0.9416667 164 3 0.875963 122 5 0.9150723 202 5 0.9005109 131 5 0.9587321 187 5 0.9118001 153 5 0.7857143 39 2 0.8969958 179 5 0.9859253 0.9224920 0.8925624 0.9785949 0.86353612 0.960895 0.9248729 0.9588188 0.9512729 1.0000000 0.9240402 0.9377664 0.9326513 0.899695 0.9285550 0.9194752 0.9851140 0.9607785 0.9744144 0.9398426 0.8481712 1.0000000 0.970383 0.9660961 0.9627362 0.9324079 0.866250 0.9975131 0.9039048 0.9531404 0.9640866 0.9411084 0.9368994 0.8462709 0.89967665 0.98188406 0.915236 0.9178456 0.9663585 0.9639169 0.8781321 0.9259834 0.9294001 2 0.9389084 0.9510638 -0.00971608 5 0.862348 0.9220995 -0.0597515 0.95521558 0.23131407 insignificant 1.00000 1.00000 insignificant 9.6425e-01 0.66301060 insignificant 1.0000000 1.00000 insignificant -0.01706401 0.5050077 lowCoverage 1 lowCoverage 0.9393180 0.9238411 0.0184009 5 0.899797 0.938390 -0.0385924 5.1488e-01 6.1429e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.4265e-01 8.9990e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.6383e-03 6.9888e-01 lowCoverage 1.0000e+00 lowCoverage 0.9382470 0.9259797 0.0062019 5 0.8395474 0.9524897 -0.11294231 7.8978e-01 6.1595e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.9750e-01 7.9955e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02891882 4.0205e-01 lowCoverage 1.000000 lowCoverage 0.9509246 0.9238411 2.7849e-02 5 0.8961326 0.938390 -0.0422571 1.1272e-01 8.9167e-01 insignificant 6.9577e-01 1.0000e+00 insignificant 1.2732e-01 9.6533e-01 insignificant 8.6616e-01 1.0000e+00 insignificant 0.0247023 3.1060e-01 lowCoverage 1.0000e+00 lowCoverage 0.951029 0.9257642 0.02353417 5 0.910971 0.9389154 -0.02794456 3.1264e-02 9.1134e-01 weaklyHypermeth 6.1301e-01 1.0000e+00 insignificant 1.2523e-01 9.4131e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0459828 2.2298e-01 lowCoverage 1.0000000 lowCoverage 0.9238411 0.9256560 -0.01012287 5 0.938390 0.9287346 0.0096551 4.8123e-01 8.3480e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.2713e-01 6.5353e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0212806 5.2060e-01 lowCoverage 1.0000000 lowCoverage chr11 61497650 61498650 38763 FTH1 ENSG00000167996 0.884767 226 5 0.751731 127 6 0.7136780 117 5 0.8097156 195 5 0.7089112 61 4 0.7163755 245 6 0.7899306 85 6 0.7076720 108 5 0.6601307 84 4 0.8125902 83 5 0.8215459 180 5 0.811111 47 3 0.7568943 146 6 0.815789 22 1 0.8389610 86 5 0.8173077 30 2 0.6653846 34 2 0.7572424 298 6 0.7812132 119 6 0.719280 147 5 0.9282738 52 4 0.6056357 85 4 0.873188 121 4 0.688162 47 5 0.6833333 79 5 0.7102354 219 6 0.766895 87 6 0.747024 34 4 0.871150 89 4 0.7796428 246 6 0.7562231 166 6 0.7467025 218 5 0.4808236 126 4 0.6410277 109 4 0.6023810 110 4 0.8549451 38 3 0.446892 101 6 0.7792306 180 5 0.8131735 174 5 0.7240801 204 5 0.6080730 269 5 0.6011444 134 4 0.7323078 195 5 0.8482421 0.7407769 0.7731588 0.7474113 0.80791191 0.759789 0.8357063 0.8714091 0.7282666 0.8290242 0.7995065 0.6233810 0.7124640 0.766379 0.7422994 0.8481795 0.6262869 0.7312344 0.7532432 0.6286418 0.9184816 0.6298126 0.862230 0.6843837 0.8263804 0.7123613 0.768663 0.8408195 0.8205432 0.7463427 0.7952997 0.7379775 0.2514448 0.3359111 0.16958808 0.85077704 0.240474 0.7788972 0.7136855 0.5570014 0.4635840 0.5457378 0.6442181 2 0.7577869 0.7699238 -0.01379037 5 0.751854 0.7717090 -0.0198552 0.43456555 0.17475958 insignificant 1.00000 1.00000 insignificant 6.0855e-01 0.36866390 insignificant 1.0000000 1.00000 insignificant 0.00397275 0.8949318 lowCoverage 1 lowCoverage 0.7577869 0.4713855 0.2926068 5 0.751854 0.594381 0.1574727 7.1234e-09 9.4520e-01 hypermethylated 1.4538e-07 1.0000e+00 hypermethylated 9.8613e-03 7.5208e-01 weaklyHypermeth 1.1206e-01 1.0000e+00 insignificant 1.3280e-01 1.0003e-01 lowCoverage 1.0000e+00 lowCoverage 0.7577869 0.5932377 0.1432886 5 0.7518538 0.7414096 0.01044419 8.9350e-08 8.0375e-02 weaklyHypermeth 8.1228e-06 1.0000e+00 weaklyHypermeth 9.4586e-05 5.5499e-01 weaklyHypermeth 7.8822e-03 1.0000e+00 weaklyHypermeth 0.07125585 1.5573e-01 lowCoverage 1.000000 lowCoverage 0.7699238 0.4713855 3.1057e-01 5 0.7717090 0.594381 0.1773279 2.1720e-07 9.3502e-01 hypermethylated 5.1715e-06 1.0000e+00 hypermethylated 2.5823e-02 6.2703e-01 weaklyHypermeth 2.3910e-01 1.0000e+00 insignificant 0.1288223 1.1368e-01 lowCoverage 1.0000e+00 lowCoverage 0.769924 0.5932377 0.16108124 5 0.771709 0.7414096 0.03029934 4.8488e-05 2.7245e-01 weaklyHypermeth 4.0407e-03 1.0000e+00 weaklyHypermeth 8.1565e-04 6.4337e-01 weaklyHypermeth 7.4150e-02 1.0000e+00 weaklyHypermeth 0.0672831 2.0187e-01 lowCoverage 1.0000000 lowCoverage 0.4713855 0.5932377 -0.17386579 5 0.594381 0.7414096 -0.1470285 7.7418e-01 5.9593e-04 weaklyHypometh 1.0000e+00 9.6118e-03 weaklyHypometh 6.0321e-01 4.1383e-02 weaklyHypometh 1.0000e+00 3.8318e-01 insignificant -0.0615392 4.4760e-01 lowCoverage 1.0000000 lowCoverage chr11 61619050 61620050 38777 FTH1 ENSG00000167996 0.712535 119 6 0.728368 158 7 0.6940476 81 6 0.7597373 123 6 0.8046093 50 6 0.6129415 191 6 0.8187075 53 5 0.8666338 104 5 0.7643345 73 5 0.7918367 55 5 0.6769801 158 7 0.733333 29 3 0.8540938 79 5 0.592707 69 5 0.8082080 48 4 0.5969388 30 3 0.9474168 553 3 0.7879421 122 7 0.7845497 102 5 0.896363 142 6 0.6556122 29 3 0.8126984 31 3 0.843452 83 7 0.624074 56 6 0.7573165 82 6 0.7411596 183 7 0.712103 59 5 0.577083 27 3 0.697003 112 6 0.7213982 163 7 0.8576933 156 7 0.7523749 179 7 0.6626157 146 7 0.7158730 67 6 0.6270960 184 6 0.5243056 95 2 0.589583 76 6 0.7465321 169 7 0.8353259 130 6 0.7732157 110 6 0.7423970 119 6 0.8347222 64 4 0.8470344 125 7 0.8357660 0.7118091 0.6873756 0.8330224 0.79675182 0.814559 0.8328358 0.8189838 0.6796506 0.7655117 0.7878024 0.7654949 0.7929294 0.769748 0.8012176 0.4512260 0.9405830 0.8604802 0.7134282 0.8499403 0.7172175 0.8022303 0.840085 0.7507463 0.8400631 0.8118541 0.753483 0.6190299 0.7271769 0.7376837 0.8332446 0.8094041 0.6726437 0.6490050 0.68696909 0.32835821 0.791045 0.7787395 0.8168735 0.8196149 0.7808437 0.8993367 0.8183692 2 0.8096664 0.7965517 0.01899354 6 0.727291 0.6643798 0.0629115 0.03120532 0.70479441 weaklyHypermeth 1.00000 1.00000 insignificant 1.2930e-01 0.77486007 insignificant 1.0000000 1.00000 insignificant 0.03228346 0.3307211 insignificant 1 insignificant 0.8112640 0.7042062 0.0894906 6 0.769249 0.661903 0.1073459 1.0237e-03 9.8976e-01 weaklyHypermeth 9.3913e-03 1.0000e+00 weaklyHypermeth 1.0656e-02 9.9384e-01 weaklyHypermeth 1.1710e-01 1.0000e+00 insignificant 1.1728e-01 1.5276e-02 weaklyHypermeth 2.6337e-01 insignificant 0.8115002 0.8394161 -0.0098485 6 0.7858726 0.8049878 -0.01911523 7.2018e-01 5.3592e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.4029e-01 4.2689e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04492483 1.5356e-01 insignificant 1.000000 insignificant 0.7977528 0.7061224 6.9364e-02 6 0.6974844 0.728094 -0.0306093 6.8400e-05 7.8436e-01 weaklyHypermeth 9.1199e-04 1.0000e+00 weaklyHypermeth 5.3970e-03 6.7574e-01 weaklyHypermeth 6.8317e-02 1.0000e+00 weaklyHypermeth 0.0849964 6.6344e-02 insignificant 7.2849e-01 insignificant 0.799130 0.8391225 -0.02757184 6 0.734356 0.7806113 -0.04625576 9.2166e-01 2.6779e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3989e-01 1.8723e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0772083 3.0643e-02 weaklyHypometh 1.0000000 insignificant 0.7021858 0.8394161 -0.08285317 6 0.586771 0.8049878 -0.2182170 9.9095e-01 3.3839e-03 weaklyHypometh 1.0000e+00 3.9810e-02 weaklyHypometh 9.9157e-01 2.3495e-03 weaklyHypometh 1.0000e+00 5.3398e-02 weaklyHypometh -0.1622047 3.2561e-03 weaklyHypometh 0.1032268 insignificant chr11 61949250 61950250 38785 SCGB1A1 ENSG00000149021 0.857890 374 7 0.872865 225 6 0.7850659 121 7 0.8562739 281 7 0.8863171 137 8 0.8946363 490 7 0.6863505 209 7 0.7898530 168 7 0.8764761 134 6 0.8333333 63 9 0.8846844 233 7 0.711827 86 6 0.9300737 99 8 0.820296 97 9 0.8386314 164 6 0.8328523 86 9 NA 0 0 0.8461293 637 9 0.8021670 347 9 0.939126 306 6 0.8509921 67 7 1.0000000 11 0 0.849649 132 9 0.791168 75 6 0.6155197 167 3 0.8476487 240 10 0.907143 134 6 0.802174 67 3 0.896334 308 10 0.8494240 314 7 0.8694051 192 6 0.9369416 355 7 0.7498311 196 9 0.7883838 174 7 0.7049257 196 9 1.0000000 27 3 0.855242 181 7 0.7510345 218 7 0.9416017 310 6 0.7799307 345 6 0.9142861 320 9 0.8542506 313 6 0.9095634 319 6 0.9244932 0.8438206 0.8920775 0.8846938 0.86974292 0.910830 0.8067811 0.8409997 0.8997434 0.8776699 0.8654921 0.8775692 0.9366552 0.927423 0.8583082 0.8547787 NA 0.8849459 0.8934042 0.9085011 0.9312201 0.9283893 0.855311 0.8480583 0.8777074 0.9270957 0.901032 0.9507176 0.9382218 0.8963195 0.8793089 0.8991781 0.7422493 0.7261204 0.67270183 0.74922853 0.762310 0.7058441 0.9472315 0.8721084 0.9507028 0.9170129 0.9299356 5 0.8794643 0.8971872 -0.01747215 6 0.799460 0.8301925 -0.0307329 0.96258563 0.07708730 insignificant 1.00000 1.00000 insignificant 9.9322e-01 0.05479807 insignificant 1.0000000 1.00000 insignificant -0.01216412 0.6981970 insignificant 1 insignificant 0.8794643 0.7358871 0.1443675 6 0.799460 0.700091 0.0993689 5.6695e-08 2.9349e-01 weaklyHypermeth 1.0308e-06 1.0000e+00 weaklyHypermeth 2.0200e-01 3.8407e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.0966e-02 5.2470e-01 insignificant 1.0000e+00 insignificant 0.8800564 0.9203485 -0.0364080 6 0.8544056 0.8782623 -0.02385676 9.8073e-01 2.2451e-02 weaklyHypometh 1.0000e+00 5.7566e-01 insignificant 9.8692e-01 9.1864e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04072404 2.5265e-01 insignificant 1.000000 insignificant 0.8971872 0.7358871 1.4200e-01 7 0.8301925 0.700091 0.1301018 1.3447e-04 9.3303e-01 weaklyHypermeth 1.6809e-03 1.0000e+00 weaklyHypermeth 1.5307e-01 9.2673e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0431303 4.2148e-01 insignificant 1.0000e+00 insignificant 0.898396 0.9203485 -0.01949076 6 0.873212 0.8782623 -0.00505059 6.3897e-01 2.7659e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.7642e-01 6.4503e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0285599 4.8430e-01 insignificant 1.0000000 insignificant 0.7381193 0.9203485 -0.18236627 6 0.770100 0.8782623 -0.1081626 8.4504e-01 9.1033e-04 weaklyHypometh 1.0000e+00 1.4114e-02 weaklyHypometh 6.9782e-01 1.5656e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0716902 2.0487e-01 insignificant 1.0000000 insignificant chr11 61984350 61985350 38792 SCGB1A1 ENSG00000149021 0.781152 143 6 0.578100 90 6 0.5833333 24 3 0.7798822 143 6 0.6455026 48 6 0.8023810 62 6 0.6693122 61 6 0.8263889 85 6 0.6784091 63 6 0.8650794 26 3 0.7845141 138 6 0.670918 29 3 0.8299581 81 6 0.734848 59 6 0.7722222 52 6 0.3888889 12 0 1.0000000 3 0 0.6673968 196 6 0.9583333 15 0 0.845014 67 6 0.8750000 28 3 0.7500000 11 0 0.759804 62 3 0.603968 36 6 0.8570411 94 5 0.7395833 80 6 0.729167 47 5 0.761111 22 3 0.776533 102 5 0.7161706 67 6 0.7274306 73 6 0.7900433 60 6 0.6237708 109 6 0.7834596 61 6 0.7666667 43 6 0.8888889 9 0 0.717677 61 6 0.8119048 55 4 0.7590041 140 6 0.7305068 111 6 0.7770830 137 6 0.7210551 120 6 0.7273420 97 6 0.7868908 0.5921943 0.6600877 0.7830941 0.67606516 0.816847 0.6757519 0.8218202 0.6333732 0.8605890 0.6819658 0.6374530 0.7673979 0.766597 0.8039474 0.4605263 0.8563812 0.7751407 0.9506579 0.8573999 0.8684211 0.7368421 0.728457 0.5867794 0.8526364 0.8328947 0.819079 0.7675439 0.7649728 0.7186560 0.7955044 0.7713317 0.6322167 0.8091773 0.78947368 0.81138547 0.721093 0.8035714 0.7682538 0.7383426 0.7863583 0.7486179 0.7376419 0 0.7392241 0.7683284 -0.03007630 6 0.710195 0.6918001 0.0183948 0.99047248 0.50079501 insignificant 1.00000 1.00000 insignificant 8.5905e-01 0.63729537 insignificant 1.0000000 1.00000 insignificant -0.01407253 0.7065193 lowCoverage 1 lowCoverage 0.7405523 0.7366864 -0.0010944 6 0.729802 0.732918 -0.0031164 5.4931e-01 7.2647e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.8509e-01 7.9966e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -2.2313e-02 6.4994e-01 lowCoverage 1.0000e+00 lowCoverage 0.7405523 0.7735537 -0.0260737 6 0.7298018 0.7527342 -0.02293242 8.3749e-01 2.7478e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.3484e-01 7.8242e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00008354 9.9800e-01 lowCoverage 1.000000 lowCoverage 0.7700297 0.7366864 3.2173e-02 6 0.7683002 0.732918 0.0353820 2.3270e-01 9.5481e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.3766e-01 8.8975e-01 insignificant 9.2392e-01 1.0000e+00 insignificant -0.0082403 8.4800e-01 lowCoverage 1.0000e+00 lowCoverage 0.770030 0.7735537 0.00575986 6 0.768300 0.7527342 0.01556596 4.0975e-01 4.5576e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.0599e-01 8.9170e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0141561 5.4140e-01 lowCoverage 1.0000000 lowCoverage 0.7366864 0.7735537 -0.02307652 6 0.732918 0.7527342 -0.0198160 8.1742e-01 1.2424e-01 insignificant 1.0000e+00 8.0158e-01 insignificant 5.0310e-01 5.8481e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0223964 5.7855e-01 lowCoverage 1.0000000 lowCoverage chr11 61995650 61996650 38795 ENSG00000209876 0.930604 250 6 0.890871 208 7 0.8930660 108 7 0.8116300 154 6 0.7414141 55 3 0.9311958 255 6 0.7797619 57 6 0.8269231 98 6 0.9212963 29 1 0.8456790 40 1 0.9198193 168 6 0.805556 14 1 0.9756098 50 1 0.966667 34 1 0.9287879 62 3 0.6979167 14 1 NA 0 0 0.9005891 224 4 0.9729692 162 4 0.982446 188 7 0.9333333 33 3 1.0000000 11 1 0.994681 118 7 0.991228 52 4 0.8680589 198 4 0.9290221 214 7 0.908511 68 3 0.814815 11 1 0.929354 161 6 0.9512674 188 7 0.9451873 231 7 0.9575651 173 6 0.9610245 185 7 0.9525181 178 6 0.9908519 411 6 1.0000000 95 3 0.722857 54 4 0.9012463 245 7 0.9175343 128 6 0.9372599 247 6 0.8970137 160 6 0.8943669 228 4 0.8704082 186 6 0.8834940 0.8487988 0.6539293 0.9094573 0.80448319 0.898519 0.7471461 0.9099930 0.8367580 0.7838661 0.8408259 0.6022519 0.9037755 0.920060 0.8368618 0.3902626 NA 0.8369581 0.9246710 0.9846540 0.9726027 1.0000000 0.972020 0.9653929 0.5379800 0.8882801 0.874672 0.6285584 0.9273347 0.9311914 0.9295255 0.9098996 0.9182016 0.9517532 0.99068352 0.85862300 0.676438 0.6794062 0.9027125 0.8279815 0.8008668 0.6044200 0.8248532 1 0.8938135 0.9293553 -0.02939970 6 0.799570 0.9489977 -0.1494275 0.98364039 0.14411354 insignificant 1.00000 1.00000 insignificant 9.6980e-01 0.18808914 insignificant 1.0000000 1.00000 insignificant -0.05510438 0.0324183 lowCoverage 1 lowCoverage 0.8938135 0.9400685 -0.0246221 6 0.799570 0.838575 -0.0390052 9.9955e-01 6.7660e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8286e-01 5.2753e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -4.1269e-02 4.0145e-01 lowCoverage 1.0000e+00 lowCoverage 0.8942263 0.8451001 0.0646834 6 0.9137946 0.8988860 0.01490860 3.7539e-01 6.8466e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.5628e-01 8.8258e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02316910 3.0726e-01 lowCoverage 1.000000 lowCoverage 0.9293553 0.9400685 -5.0008e-06 7 0.9489977 0.838575 0.1104223 9.8942e-01 1.2781e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.7124e-01 8.6987e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0138355 7.6788e-01 lowCoverage 1.0000e+00 lowCoverage 0.929307 0.8451001 0.08351344 6 0.941712 0.8988860 0.04282572 6.5747e-02 8.7665e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8977e-02 9.3245e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0319353 1.1680e-01 lowCoverage 1.0000000 lowCoverage 0.9408740 0.8451001 0.07113460 6 0.958372 0.8988860 0.0594859 8.8913e-02 9.9391e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.1017e-01 9.6023e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0180997 6.9363e-01 insignificant 1.0000000 insignificant chr11 62029750 62030750 38799 ENSG00000209876 0.461825 155 5 0.582869 168 9 0.4477604 298 10 0.3622135 115 7 0.4542101 176 10 0.3647202 252 10 0.4142752 280 10 0.4899057 295 11 0.3861877 240 10 0.5076898 202 10 0.5194116 297 11 0.417016 137 7 0.3630583 188 7 0.373457 95 7 0.4542418 203 10 0.4326923 123 7 0.1146645 105 4 0.3601981 128 7 0.3603326 123 9 0.315075 218 10 0.5125815 100 10 0.4464993 124 9 0.475070 172 10 0.483022 140 10 0.6205415 138 5 0.4891162 277 11 0.461936 224 11 0.305167 137 7 0.507597 140 7 0.4618875 348 11 0.3507245 284 11 0.5272138 335 10 0.2215421 220 11 0.2848485 138 11 0.3611111 164 9 0.0656863 57 4 0.246713 192 10 0.2747305 316 11 0.5026407 160 7 0.4534688 137 5 0.2675275 115 4 0.5860314 111 4 0.2824724 170 7 0.3563834 0.3796612 0.3119947 0.3177646 0.29718815 0.350617 0.2342559 0.3673027 0.2741628 0.3906568 0.4244948 0.2974491 0.2047105 0.274399 0.2784265 0.3710122 0.1073438 0.2364648 0.2110147 0.3117885 0.4456519 0.1774477 0.384765 0.2359827 0.4058880 0.3884216 0.289854 0.3528674 0.3322284 0.3588570 0.1954403 0.4466142 0.0735437 0.1003660 0.15168574 0.20241602 0.120028 0.2466758 0.1854598 0.1798588 0.2215901 0.2521876 0.1722108 3 0.3709847 0.3956180 -0.02046447 10 0.393759 0.4557857 -0.0620268 0.89440766 0.04498550 weaklyHypometh 1.00000 1.00000 insignificant 9.9608e-01 0.03747714 weaklyHypometh 1.0000000 1.00000 insignificant -0.06102281 0.0652781 insignificant 1 insignificant 0.3711802 0.1977921 0.1740407 10 0.426572 0.265918 0.1606539 1.2448e-14 9.9775e-01 weaklyHypermeth 4.9791e-13 1.0000e+00 weaklyHypermeth 5.0492e-09 9.9971e-01 weaklyHypermeth 5.0492e-07 1.0000e+00 weaklyHypermeth 1.6665e-01 6.3618e-03 weaklyHypermeth 1.3254e-01 insignificant 0.3711802 0.1601732 0.1328322 6 0.4265721 0.3642634 0.06230868 3.7856e-04 7.9852e-01 weaklyHypermeth 1.8928e-02 1.0000e+00 weaklyHypermeth 2.9317e-02 2.3082e-01 weaklyHypermeth 7.5172e-01 1.0000e+00 insignificant -0.00933794 8.9290e-01 insignificant 1.000000 insignificant 0.3955317 0.1977921 1.9299e-01 10 0.4521012 0.265918 0.1861830 1.7399e-14 9.9999e-01 weaklyHypermeth 1.0875e-12 1.0000e+00 weaklyHypermeth 5.3894e-11 9.9999e-01 weaklyHypermeth 2.6947e-08 1.0000e+00 weaklyHypermeth 0.2276744 1.0150e-03 weaklyHypermeth 3.3832e-02 weaklyHypermeth 0.395532 0.1601732 0.16435949 6 0.452101 0.3642634 0.08783773 3.0502e-05 6.2402e-01 weaklyHypermeth 2.9167e-03 1.0000e+00 weaklyHypermeth 1.5280e-03 4.3336e-01 weaklyHypermeth 1.0914e-01 1.0000e+00 insignificant 0.0516849 4.7137e-01 insignificant 1.0000000 insignificant 0.1977921 0.1601732 -0.03634094 6 0.265918 0.3642634 -0.0983452 9.2429e-01 6.5740e-06 weaklyHypometh 1.0000e+00 2.0544e-04 weaklyHypometh 9.9755e-01 5.3577e-04 weaklyHypometh 1.0000e+00 2.0822e-02 weaklyHypometh -0.1759895 4.9184e-02 weaklyHypometh 0.6072134 insignificant chr11 62181650 62182650 38808 INTS5 ENSG00000185085 0.735679 239 8 0.694243 106 8 0.5909487 110 8 0.7282212 148 8 0.7638889 33 3 0.6756849 179 8 0.7055288 107 8 0.7156093 130 8 0.7585227 51 4 0.5895833 66 7 0.5835198 131 8 0.615152 89 8 0.7257937 81 8 NA 0 0 0.7332792 126 8 0.7500000 41 5 0.6125000 79 8 0.7268809 186 8 0.6298259 107 8 0.741943 238 8 0.3430205 55 3 0.7321429 57 8 0.695627 114 8 0.670253 43 3 0.7270833 31 3 0.6570750 151 8 0.731250 51 3 0.776018 51 3 0.687979 77 5 0.6185572 156 8 0.6806503 121 8 0.6864411 332 8 0.6976984 103 8 0.6980519 106 8 0.6436237 62 5 0.7746983 86 5 0.544471 43 3 0.6897000 139 8 0.7110598 200 8 0.7833165 246 8 0.6799364 186 8 0.7304136 229 8 0.7396790 255 8 0.7160926 0.6483058 0.5942871 0.6892554 0.72355556 0.656626 0.6861538 0.7008552 0.7070909 0.5868000 0.5693680 0.5797818 0.6837079 NA 0.7101195 0.7234286 0.6064000 0.7072214 0.6080359 0.7216447 0.4063716 0.7051429 0.670403 0.6650647 0.6660000 0.6434147 0.723200 0.7484766 0.6561704 0.6146818 0.6553887 0.6552225 0.7010159 0.6765714 0.63664646 0.73266968 0.568385 0.6620818 0.6865518 0.7552713 0.6526305 0.6922031 0.7292350 0 0.6915888 0.6771590 0.00453016 8 0.690960 0.6855958 0.0053645 0.35608491 0.75887471 insignificant 1.00000 1.00000 insignificant 2.2610e-01 0.79553001 insignificant 1.0000000 1.00000 insignificant 0.02107798 0.5546899 insignificant 1 insignificant 0.6915888 0.7012987 -0.0175076 8 0.690960 0.706163 -0.0152027 8.6544e-01 3.0140e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.1841e-01 5.0801e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.3546e-02 7.0517e-01 insignificant 1.0000e+00 insignificant 0.6915888 0.7437276 -0.0447119 8 0.6909603 0.7355606 -0.04460022 9.9905e-01 3.1209e-02 weaklyHypometh 1.0000e+00 7.0930e-01 insignificant 9.8436e-01 1.3147e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04062821 9.7492e-02 insignificant 1.000000 insignificant 0.6771590 0.7012987 -2.1640e-02 8 0.6855958 0.706163 -0.0205671 9.5360e-01 2.8892e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.3082e-01 4.0764e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0075324 8.6810e-01 insignificant 1.0000e+00 insignificant 0.677159 0.7437276 -0.04475438 8 0.685596 0.7355606 -0.04996471 9.9388e-01 6.4157e-03 weaklyHypometh 1.0000e+00 3.6548e-01 insignificant 9.6320e-01 2.6385e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0617062 1.0757e-01 insignificant 1.0000000 insignificant 0.7012987 0.7437276 -0.02390712 8 0.706163 0.7355606 -0.0293976 9.3841e-01 1.9726e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.9529e-01 1.7606e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0541738 1.6813e-01 insignificant 1.0000000 insignificant chr11 63441950 63442950 38835 RCOR2 ENSG00000167771 0.013955 867 27 0.085350 807 27 0.0027574 1118 27 0.0032255 658 21 0.0031056 974 27 0.0401294 974 27 0.0415067 1535 27 0.0435121 715 27 0.0067633 937 27 0.0052359 1038 27 0.0058053 1093 27 0.007649 1366 27 0.0040414 844 27 0.008413 346 7 0.0404413 1220 27 0.0209702 1414 27 0.0107331 795 22 0.0416875 1377 22 0.0106038 971 27 0.031821 820 27 0.0564659 367 26 0.0225931 361 14 0.027537 643 28 0.053145 474 23 0.0595238 312 13 0.0401900 1233 27 0.041090 576 20 0.036322 490 24 0.014730 720 27 0.0063105 1279 27 0.0415122 1113 27 0.0934494 1032 27 0.0268202 631 27 0.0647973 848 27 0.0792418 411 20 0.0597554 106 10 0.058911 363 25 0.0343515 824 27 0.0969956 736 27 0.0263881 802 27 0.0043003 552 12 0.0591720 1174 21 0.0653667 492 20 0.0091835 0.0122534 0.0036648 0.0065490 0.00060371 0.035498 0.0036453 0.0041363 0.0070320 0.0036570 0.0041256 0.0099034 0.0031128 0.011727 0.0090085 0.0025348 0.0070475 0.0065102 0.0089055 0.0237107 0.0492566 0.0229217 0.018800 0.0117364 0.0354559 0.0066525 0.018668 0.0240300 0.0089345 0.0038925 0.0047224 0.0164478 0.0136047 0.0280604 0.03653357 0.03256024 0.047491 0.0233945 0.0250648 0.0225327 0.0038176 0.0345848 0.0169947 10 0.0099653 0.0138372 -0.00381492 27 0.067876 0.0724728 -0.0045965 0.68375297 0.39416695 insignificant 1.00000 1.00000 insignificant 5.1636e-01 0.34703436 insignificant 1.0000000 1.00000 insignificant -0.01968714 0.0262080 weaklyHypometh 1 insignificant 0.0099653 0.0411561 -0.0305152 27 0.067876 0.049538 0.0183379 1.0000e+00 2.1149e-14 weaklyHypometh 1.0000e+00 5.2873e-12 weaklyHypometh 1.0000e+00 1.3558e-06 weaklyHypometh 1.0000e+00 6.7790e-04 weaklyHypometh -3.2594e-02 7.0136e-03 weaklyHypometh 1.4027e-01 insignificant 0.0097689 0.0197018 -0.0120877 25 0.0368106 0.0930174 -0.05620678 9.1446e-01 1.4826e-07 weaklyHypometh 1.0000e+00 3.7065e-05 weaklyHypometh 8.5082e-01 6.1582e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02905926 1.4726e-01 insignificant 1.000000 insignificant 0.0138372 0.0411561 -2.4931e-02 27 0.0724728 0.049538 0.0229344 1.0000e+00 3.8107e-07 weaklyHypometh 1.0000e+00 1.2702e-04 weaklyHypometh 9.9994e-01 7.0785e-05 weaklyHypometh 1.0000e+00 3.5393e-02 weaklyHypometh -0.0129071 2.4116e-01 insignificant 1.0000e+00 insignificant 0.013501 0.0197018 -0.00936179 25 0.036476 0.0930174 -0.05654183 9.9270e-01 6.9521e-03 weaklyHypometh 1.0000e+00 3.6590e-01 insignificant 9.9138e-01 4.5960e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0093721 6.1186e-01 insignificant 1.0000000 insignificant 0.0412339 0.0197018 0.01505907 25 0.054333 0.0930174 -0.0386849 1.8455e-02 9.9616e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 7.6689e-02 9.9978e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0035350 8.5067e-01 insignificant 1.0000000 insignificant chr11 63531350 63532350 38837 OTUB1 ENSG00000167770 0.102448 1036 34 0.087896 1593 36 0.1816087 1693 36 0.1572306 837 24 0.1167958 1221 37 0.2047461 1276 37 0.0910935 2042 38 0.1048573 1252 37 0.0702560 1551 36 0.0979548 1480 37 0.1292373 1928 37 0.102267 1422 34 0.0385753 1628 36 0.137051 300 14 0.0671522 1773 37 0.1224335 1114 36 0.1674268 4064 30 0.0987399 1617 35 0.0888530 1534 35 0.090206 1303 37 0.1719108 585 34 0.0401314 534 17 0.169560 1180 35 0.070138 622 36 0.1164769 1089 15 0.1327392 2107 36 0.115534 939 35 0.070487 656 36 0.103013 1275 35 0.0735285 2229 37 0.0798832 2046 37 0.3579599 1138 38 0.2744817 1174 36 0.0926842 1538 34 0.1551388 1102 34 0.0837106 347 19 0.240911 691 38 0.3627775 1510 36 0.0871120 1055 35 0.0845020 1145 35 0.0287492 828 29 0.0344088 1231 25 0.0912974 752 28 0.0762618 0.0848281 0.1478739 0.0819051 0.09307185 0.162153 0.0879617 0.1128082 0.0556544 0.0918071 0.1276921 0.1021099 0.0282749 0.148280 0.0629827 0.0992939 0.1898842 0.0832096 0.0822355 0.0631854 0.2222714 0.0298700 0.163067 0.0332607 0.0794634 0.0546817 0.111981 0.0432072 0.0928175 0.0532247 0.0624052 0.3829438 0.2129103 0.0125335 0.16675388 0.04347350 0.206467 0.3314333 0.0326756 0.0404507 0.0269229 0.0172431 0.0546914 23 0.1246780 0.1049451 0.00470571 36 0.125864 0.1103312 0.0155331 0.88064031 0.51668827 insignificant 1.00000 1.00000 insignificant 5.2331e-01 0.97508165 insignificant 1.0000000 1.00000 insignificant -0.01227208 0.6416981 insignificant 1 insignificant 0.1248368 0.1766001 -0.0681228 35 0.157173 0.174026 -0.0168525 5.6772e-01 4.6404e-17 weaklyHypometh 1.0000e+00 1.5468e-14 weaklyHypometh 4.8292e-01 1.5246e-03 weaklyHypometh 1.0000e+00 2.5411e-01 insignificant -8.8776e-02 1.0655e-01 insignificant 1.0000e+00 insignificant 0.1247796 0.0431138 0.0997514 32 0.1170386 0.0820006 0.03503805 1.7928e-14 9.9510e-01 weaklyHypermeth 8.9639e-12 1.0000e+00 weaklyHypermeth 1.8258e-16 1.0000e+00 weaklyHypermeth 1.8258e-13 1.0000e+00 weaklyHypermeth 0.04762756 2.0704e-02 weaklyHypermeth 0.470556 insignificant 0.1050584 0.1767574 -7.2428e-02 36 0.1292175 0.196753 -0.0675355 9.6854e-01 1.5984e-06 weaklyHypometh 1.0000e+00 3.9961e-04 weaklyHypometh 8.4330e-01 1.3054e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0765038 1.7257e-01 insignificant 1.0000e+00 insignificant 0.104963 0.0431138 0.06647733 32 0.117514 0.0820006 0.03551296 8.0772e-05 9.9999e-01 weaklyHypermeth 5.3848e-03 1.0000e+00 weaklyHypermeth 4.8459e-09 1.0000e+00 weaklyHypermeth 2.4230e-06 1.0000e+00 weaklyHypermeth 0.0598996 4.8046e-02 weaklyHypermeth 1.0000000 insignificant 0.1767852 0.0431052 0.11856421 32 0.201329 0.0800936 0.1212351 2.5896e-06 9.9988e-01 weaklyHypermeth 1.2948e-03 1.0000e+00 weaklyHypermeth 2.6274e-06 1.0000e+00 weaklyHypermeth 1.3137e-03 1.0000e+00 weaklyHypermeth 0.1364034 2.7838e-02 weaklyHypermeth 0.3920914 insignificant chr11 63800650 63801650 38839 PLCB3 ENSG00000149782 0.897284 357 5 0.867384 251 7 0.8286091 245 7 0.9466518 372 6 0.9440559 58 5 0.8212707 293 7 0.8879745 135 6 0.8325767 160 6 0.8189916 114 5 0.8733678 120 5 0.8983325 197 6 0.888905 79 5 0.9050464 197 5 NA 0 0 0.9562282 137 5 0.8925926 67 5 0.8134211 67 5 0.7561687 401 7 0.9263117 105 5 0.939857 274 6 0.9373543 76 6 0.9263399 110 6 0.910302 202 6 1.000000 96 6 0.9176687 183 6 0.9489170 368 7 0.897856 104 5 0.744599 69 5 0.812418 146 5 0.9496038 309 7 0.9134118 389 7 0.9160125 368 7 0.5173128 205 7 0.5644749 160 6 0.6542857 76 4 0.8434831 112 6 0.479977 90 6 0.9311081 335 7 0.9400052 334 7 0.9265946 306 6 0.9471356 339 6 0.9157529 341 5 0.9476318 401 7 0.9070243 0.8720486 0.8567248 0.9452770 0.95917776 0.917897 0.8813467 0.8750061 0.8278716 0.9347264 0.8993923 0.8778857 0.8994881 NA 0.9557384 0.9360934 0.8064529 0.8882376 0.9187013 0.9172709 0.9079737 0.9296216 0.904941 1.0000000 0.9385676 0.9512920 0.893443 0.9433608 0.8657166 0.9634529 0.9107172 0.9030941 0.4375380 0.4697759 0.51689373 0.81743644 0.539900 0.9224690 0.9356295 0.9246339 0.9483375 0.9312571 0.9347249 5 0.8999449 0.9249896 -0.02190557 7 0.747480 0.9219589 -0.1744790 0.99618267 0.00424480 weaklyHypometh 1.00000 0.70747 insignificant 9.9411e-01 0.02493135 weaklyHypometh 1.0000000 1.00000 insignificant -0.02752118 0.2455558 insignificant 1 insignificant 0.9004138 0.7310838 0.1984630 7 0.889617 0.721190 0.1684272 7.7287e-10 6.0937e-01 weaklyHypermeth 1.9322e-08 1.0000e+00 weaklyHypermeth 5.3138e-05 9.8906e-01 weaklyHypermeth 1.6606e-03 1.0000e+00 weaklyHypermeth 2.1358e-01 3.5454e-02 weaklyHypermeth 4.7273e-01 insignificant 0.9004138 0.9337594 -0.0351962 6 0.8896170 0.9404788 -0.05086183 9.9970e-01 6.1411e-04 weaklyHypometh 1.0000e+00 6.1411e-02 weaklyHypometh 9.9764e-01 4.0568e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.05673829 5.2465e-04 weaklyHypometh 0.043130 weaklyHypometh 0.9251559 0.7310838 2.0053e-01 7 0.9200696 0.721190 0.1988797 1.1371e-07 9.4572e-01 hypermethylated 2.8427e-06 1.0000e+00 hypermethylated 3.2484e-05 9.9011e-01 hypermethylated 1.5468e-03 1.0000e+00 hypermethylated 0.2411000 2.2404e-02 weaklyHypermeth 3.1116e-01 insignificant 0.925156 0.9337594 -0.01421820 6 0.920070 0.9404788 -0.02040926 9.4199e-01 1.0357e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.9878e-01 2.8912e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0292171 1.7317e-01 insignificant 1.0000000 insignificant 0.7310838 0.9337594 -0.22391130 6 0.721190 0.9404788 -0.2192890 9.9854e-01 2.9457e-04 hypomethylated 1.0000e+00 5.5579e-03 hypomethylated 9.9832e-01 2.8587e-04 hypomethylated 1.0000e+00 1.2994e-02 hypomethylated -0.2703171 1.5347e-02 weaklyHypometh 0.2786729 insignificant chr11 63856750 63857750 38841 PRDX5 ENSG00000126432 0.669235 419 13 0.697543 247 9 0.6940591 162 7 0.6873947 357 12 0.6364759 83 7 0.6177509 459 13 0.6979841 80 7 0.6352138 154 7 0.7207792 97 7 0.6993386 86 7 0.7519757 303 7 0.561376 36 3 0.7630527 158 9 0.811171 92 7 0.6956427 123 7 0.5238095 33 2 0.5832798 437 5 0.6507493 544 13 0.7740049 259 7 0.671006 338 13 0.6282651 60 6 0.8515038 57 3 0.574900 232 10 0.750111 125 7 0.7251394 69 3 0.7811138 336 9 0.694977 118 7 0.561039 57 5 0.700499 277 8 0.7837313 332 7 0.7452129 300 8 0.5934692 336 13 0.7026759 217 9 0.3827714 125 6 0.6535806 281 6 0.3333333 8 0 0.515812 161 7 0.6990451 297 9 0.6385125 345 13 0.6960399 380 10 0.6562479 289 10 0.7553318 200 7 0.6439395 301 10 0.7732114 0.6750572 0.6917747 0.7531178 0.78567863 0.808721 0.7414496 0.7715445 0.7549074 0.7988232 0.7348222 0.5063629 0.8230180 0.796516 0.7245774 0.5363985 0.7681444 0.7700352 0.7824585 0.8022855 0.6644384 0.7502355 0.722089 0.7453391 0.7599758 0.7958879 0.710714 0.7186097 0.7052865 0.7772359 0.7984687 0.7948112 0.7450764 0.4397361 0.74727186 0.59220867 0.649322 0.7647824 0.7564495 0.8108277 0.7925880 0.8016343 0.8150317 2 0.7133901 0.7237930 0.00412629 7 0.662608 0.6349768 0.0276313 0.18196817 0.91264095 insignificant 1.00000 1.00000 insignificant 1.9678e-01 0.49773291 insignificant 1.0000000 1.00000 insignificant -0.02207131 0.4856521 insignificant 1 insignificant 0.7548569 0.6519743 0.0830848 7 0.741051 0.647976 0.0930749 6.2853e-06 9.9499e-01 weaklyHypermeth 8.8526e-05 1.0000e+00 weaklyHypermeth 7.6013e-04 9.7083e-01 weaklyHypermeth 1.3264e-02 1.0000e+00 weaklyHypermeth 1.2922e-01 1.1095e-01 insignificant 1.0000e+00 insignificant 0.7128757 0.7267327 -0.0189575 10 0.6366549 0.6600482 -0.02339330 9.5489e-01 1.0518e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7937e-01 1.8043e-02 weaklyHypometh 1.0000e+00 6.1056e-01 insignificant -0.00092224 9.7356e-01 insignificant 1.000000 insignificant 0.7347670 0.6519743 8.4383e-02 7 0.7337466 0.647976 0.0857703 2.9531e-04 9.9754e-01 weaklyHypermeth 3.2813e-03 1.0000e+00 weaklyHypermeth 1.2164e-02 9.9762e-01 weaklyHypermeth 1.2940e-01 1.0000e+00 insignificant 0.1512937 7.4297e-02 insignificant 7.5047e-01 insignificant 0.723673 0.7267327 -0.01881912 7 0.606898 0.6600482 -0.05315013 9.6422e-01 2.7322e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.8581e-01 1.9307e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 0.0211491 5.4836e-01 insignificant 1.0000000 insignificant 0.6519743 0.7630402 -0.10003945 7 0.647976 0.7686171 -0.1206408 9.9967e-01 2.5361e-05 weaklyHypometh 1.0000e+00 6.3402e-04 weaklyHypometh 1.0000e+00 1.2852e-04 weaklyHypometh 1.0000e+00 9.1799e-03 weaklyHypometh -0.1301446 1.1152e-01 insignificant 0.9782781 insignificant chr11 63972250 63973250 38843 ENSG00000181908 0.126563 617 13 0.213458 569 13 0.1090325 630 13 0.1164827 553 12 0.1628279 370 13 0.1199610 869 13 0.0702112 555 13 0.2195560 491 13 0.1565124 691 13 0.1317380 769 13 0.1829847 450 13 0.120881 609 13 0.0705464 701 13 0.181386 293 8 0.1052079 758 13 0.1082884 443 13 0.0314505 292 10 0.1656548 717 12 0.1438049 462 13 0.081241 764 13 0.1802173 267 11 0.0601058 469 13 0.111271 543 12 0.163882 339 13 0.0287038 345 12 0.0419519 742 13 0.117387 606 12 0.097041 305 13 0.307799 417 12 0.0199199 828 12 0.0937531 727 13 0.1687919 744 13 0.0840695 475 12 0.0875205 301 13 0.1805556 42 2 0.0085251 230 11 0.104229 271 13 0.0715899 527 13 0.2053123 808 13 0.0611686 633 12 0.0170342 661 12 0.0357571 659 12 0.2421789 791 12 0.0570095 0.0584365 0.0519703 0.0467295 0.03442909 0.063135 0.0400438 0.0392627 0.0582539 0.0599730 0.0757934 0.0453883 0.0154252 0.076370 0.0293399 0.0574833 0.0163695 0.0637144 0.0350874 0.0249126 0.0736980 0.0133047 0.066878 0.0697130 0.0383578 0.0402378 0.057889 0.0731774 0.0649374 0.0252501 0.0355351 0.0812785 0.0129191 0.0447428 0.08212023 0.01445695 0.030719 0.0050296 0.0278140 0.0269025 0.0152321 0.0269425 0.0564778 12 0.0600707 0.0571970 0.00127682 13 0.130127 0.1013391 0.0287877 0.54848076 0.45021849 insignificant 1.00000 1.00000 insignificant 7.9413e-01 0.47522503 insignificant 1.0000000 1.00000 insignificant 0.01498742 0.5695201 insignificant 1 insignificant 0.0600758 0.0254743 0.0428888 12 0.136633 0.105470 0.0311636 4.9728e-04 4.5646e-01 weaklyHypermeth 4.7816e-03 1.0000e+00 weaklyHypermeth 1.8441e-02 5.7355e-01 weaklyHypermeth 1.7397e-01 1.0000e+00 insignificant 4.1474e-02 1.4031e-01 insignificant 1.0000e+00 insignificant 0.0600914 0.0309685 0.0171220 12 0.1438243 0.1959143 -0.05208993 3.6224e-02 5.3030e-02 weaklyHypermeth 7.2448e-01 1.0000e+00 insignificant 2.0097e-02 2.6827e-01 weaklyHypermeth 5.7420e-01 1.0000e+00 insignificant 0.01859919 7.1432e-01 insignificant 1.000000 insignificant 0.0574949 0.0254605 4.0994e-02 12 0.1330852 0.100447 0.0326380 9.1994e-03 9.0874e-01 weaklyHypermeth 7.6028e-02 1.0000e+00 weaklyHypermeth 1.6775e-02 9.4293e-01 weaklyHypermeth 1.6944e-01 1.0000e+00 insignificant 0.0264870 4.2986e-01 insignificant 1.0000e+00 insignificant 0.057260 0.0309685 0.02294443 12 0.112006 0.1959143 -0.08390787 9.1118e-02 4.4915e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.3010e-02 5.0187e-01 weaklyHypermeth 8.5971e-01 1.0000e+00 insignificant 0.0036118 9.4680e-01 insignificant 1.0000000 insignificant 0.0249864 0.0309685 -0.02125336 12 0.097863 0.1959143 -0.0980516 8.4302e-01 3.5625e-03 weaklyHypometh 1.0000e+00 4.1424e-02 weaklyHypometh 8.3976e-01 7.9915e-02 insignificant 1.0000e+00 6.1473e-01 insignificant -0.0228752 6.7368e-01 insignificant 1.0000000 insignificant chr11 64095450 64096450 38844 SLC22A11 ENSG00000168065 0.829016 239 7 0.724507 194 10 0.8475580 97 8 0.7680510 273 10 0.4285714 42 3 0.8196613 327 10 0.7760331 52 3 0.8380714 249 10 0.9354985 82 4 0.8557074 123 6 0.7968397 260 10 0.616898 37 3 0.8363456 210 7 0.735763 75 3 0.8520751 141 4 0.5833333 37 3 0.9642857 15 0 0.8205093 301 9 0.9476587 140 10 0.765300 209 6 0.6769565 72 5 0.8312203 144 7 0.781159 146 7 0.877208 98 7 0.8761882 276 10 0.8910150 216 10 0.797258 135 9 0.432295 43 3 0.812925 116 8 0.8991720 294 10 0.8320223 223 10 0.8593100 264 9 0.7232460 173 10 0.7511357 149 8 0.9854312 187 8 0.6659226 61 4 0.672368 125 9 0.7825687 252 10 0.8004885 171 4 0.9002753 274 9 0.8430270 176 6 0.8369458 117 6 0.7264846 194 10 0.8595203 0.7794825 0.8303771 0.8523408 0.92211958 0.839757 0.8362754 0.8556837 0.8507108 0.8559682 0.9102205 0.8780697 0.8899372 0.845383 0.8195380 0.7282037 0.8907767 0.8379674 0.9206831 0.8857696 0.8765091 0.8611215 0.921460 0.9573064 0.8758872 0.9155048 0.820399 0.8464933 0.8849151 0.9241125 0.8737060 0.9305930 0.7299881 0.5817741 0.79020617 0.75749414 0.636007 0.8594288 0.8792197 0.8778480 0.7891258 0.8726984 0.8852462 3 0.8398324 0.8596838 -0.02848666 9 0.675554 0.8028005 -0.1272468 0.99743509 0.02426719 weaklyHypometh 1.00000 1.00000 insignificant 9.2089e-01 0.37806862 insignificant 1.0000000 1.00000 insignificant -0.01014332 0.8314339 insignificant 1 insignificant 0.8406452 0.8141499 0.0304262 9 0.798382 0.734992 0.0633892 7.2076e-05 1.3497e-01 weaklyHypermeth 7.8344e-04 1.0000e+00 weaklyHypermeth 4.9216e-02 5.8090e-01 weaklyHypermeth 3.9061e-01 1.0000e+00 insignificant 2.3639e-02 6.8208e-01 insignificant 1.0000e+00 insignificant 0.8406452 0.8537634 -0.0080448 7 0.7983816 0.8059754 -0.00759380 7.5436e-01 3.9628e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.8179e-01 8.0509e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03436012 4.0969e-01 insignificant 1.000000 insignificant 0.8604651 0.8141499 4.7977e-02 9 0.8578551 0.734992 0.1228627 1.5424e-03 6.6014e-01 weaklyHypermeth 1.5121e-02 1.0000e+00 weaklyHypermeth 6.1738e-02 6.3727e-01 insignificant 4.8612e-01 1.0000e+00 insignificant 0.0337820 5.9054e-01 insignificant 1.0000e+00 insignificant 0.860603 0.8540773 0.01516500 7 0.869701 0.8221441 0.04755639 3.6536e-01 9.6201e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.9995e-01 9.7792e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0242168 6.1588e-01 insignificant 1.0000000 insignificant 0.8141499 0.8537634 -0.04759384 7 0.734992 0.8059754 -0.0709830 4.1497e-01 5.4259e-02 insignificant 1.0000e+00 3.8211e-01 insignificant 4.6084e-01 1.9088e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0579988 3.3017e-01 insignificant 1.0000000 insignificant chr11 64234850 64235850 38849 NRXN2 ENSG00000110076 0.107558 335 7 0.132017 293 7 0.3917627 213 7 0.0481324 160 7 0.3223078 136 7 0.0705625 343 7 0.6787974 230 7 0.1652823 237 7 0.1213080 267 7 0.1332130 295 7 0.2009484 243 7 0.153416 266 7 0.6647648 262 7 NA 0 0 0.0754562 323 7 0.0940556 293 7 0.0955501 296 7 0.1167929 131 7 0.2748282 197 7 0.075121 271 7 0.0089286 141 7 0.0819896 153 7 0.078119 232 7 0.029252 101 7 0.1253501 112 7 0.1583858 328 7 0.049185 160 7 0.010204 69 4 0.138319 226 7 0.1267872 366 7 0.1214555 330 7 0.1073311 356 7 0.0868929 208 7 0.0406317 224 7 0.0000000 82 3 0.1102172 126 7 0.151871 91 7 0.1086442 376 7 0.2433584 271 7 0.1186988 372 7 0.2079452 151 7 0.1593267 292 7 0.2018955 260 7 0.1109194 0.1366285 0.3948165 0.0492127 0.31104065 0.077914 0.6624322 0.1724697 0.1282860 0.1358467 0.2077768 0.1654876 0.6583598 NA 0.0822034 0.0971141 0.0989995 0.1150658 0.2854440 0.0764450 0.0075688 0.0835987 0.073357 0.0311927 0.1212214 0.1644359 0.055414 0.0085190 0.1425175 0.1283307 0.1307721 0.1142503 0.0895266 0.0365180 0.05095946 0.10987163 0.151284 0.1011972 0.2355302 0.1150897 0.2030025 0.1605181 0.2036219 7 0.2041327 0.1126651 0.08991419 7 0.194226 0.1021041 0.0921220 0.00029071 0.99999872 weaklyHypermeth 0.17789 1.00000 insignificant 7.4091e-06 0.99999797 weaklyHypermeth 0.0074091 1.00000 weaklyHypermeth 0.12013881 0.0147144 weaklyHypermeth 1 insignificant 0.2041327 0.0785908 0.1257661 7 0.194226 0.089067 0.1051595 7.1003e-04 9.9851e-01 weaklyHypermeth 6.6358e-03 1.0000e+00 weaklyHypermeth 3.3162e-04 9.7547e-01 weaklyHypermeth 7.0557e-03 1.0000e+00 weaklyHypermeth 1.2337e-01 1.7751e-02 weaklyHypermeth 2.9100e-01 insignificant 0.2041327 0.1783061 0.0260165 7 0.1942261 0.1792422 0.01498393 3.5531e-01 8.1103e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.1903e-01 1.0038e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02016953 6.7832e-01 insignificant 1.000000 insignificant 0.1126651 0.0785908 3.6502e-02 7 0.1021041 0.089067 0.0130376 1.7599e-02 2.4727e-01 weaklyHypermeth 1.3391e-01 1.0000e+00 insignificant 6.3535e-01 4.4127e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0032328 9.0634e-01 insignificant 1.0000e+00 insignificant 0.112665 0.1783061 -0.06543767 7 0.102104 0.1792422 -0.07713805 9.9524e-01 4.3500e-07 weaklyHypometh 1.0000e+00 1.4500e-04 weaklyHypometh 9.9994e-01 1.0396e-06 weaklyHypometh 1.0000e+00 3.4653e-04 weaklyHypometh -0.0999693 5.0063e-03 weaklyHypometh 0.3712578 insignificant 0.0785908 0.1783061 -0.09874388 7 0.089067 0.1792422 -0.0901756 9.9823e-01 2.4836e-05 weaklyHypometh 1.0000e+00 6.3402e-04 weaklyHypometh 9.9998e-01 2.0094e-04 weaklyHypometh 1.0000e+00 1.0576e-02 weaklyHypometh -0.1032021 8.8130e-03 weaklyHypometh 0.1869086 insignificant chr11 64394650 64395650 38852 CDC42BPG ENSG00000171219 0.855642 193 8 0.853685 267 8 0.6612254 147 8 0.7809501 141 8 0.8615196 81 5 0.7993791 298 8 0.7434880 106 5 0.7069739 135 8 0.8874733 91 8 0.9095685 129 8 0.8787533 344 8 0.589014 94 5 0.7811154 197 8 0.746377 26 1 0.7597985 166 7 0.5088034 70 5 0.7731481 36 3 0.6237094 157 8 0.9161809 223 8 0.826473 241 8 0.8994717 127 8 0.5203125 55 3 0.879817 150 8 0.747009 78 7 0.4795094 58 4 0.8033661 248 8 0.885916 143 8 0.808586 55 6 0.740525 157 8 0.8327022 255 8 0.8240636 235 8 0.9237128 325 8 0.3055097 232 8 0.4009594 237 8 0.3562706 288 7 0.4285714 35 4 0.469200 112 8 0.5455084 234 8 0.3336159 189 8 0.3157404 219 8 0.5384615 89 8 0.2111083 146 8 0.4119240 163 8 0.8190139 0.8206591 0.5883373 0.7265435 0.82940196 0.729205 0.8003690 0.6220055 0.8473825 0.8693998 0.8657030 0.5388778 0.7445855 0.727143 0.7085659 0.5471946 0.6973237 0.5513386 0.8971310 0.7855182 0.8670275 0.5084583 0.843673 0.8561538 0.4217549 0.7987558 0.845620 0.7747197 0.6968339 0.7787274 0.8007151 0.9158976 0.2729523 0.3265296 0.33908185 0.33209578 0.258015 0.4901987 0.2608220 0.2156576 0.4473718 0.1542727 0.3004258 4 0.7771410 0.8269639 -0.04456024 8 0.830386 0.7446263 0.0857599 0.70623622 0.05734940 insignificant 1.00000 1.00000 insignificant 7.4165e-01 0.04638132 weaklyHypometh 1.0000000 1.00000 insignificant -0.00558530 0.9084842 insignificant 1 insignificant 0.7768227 0.4261863 0.3830764 8 0.719275 0.481871 0.2374042 1.0020e-35 9.8810e-01 hypermethylated 2.0040e-33 1.0000e+00 hypermethylated 1.1830e-10 9.4501e-01 hypermethylated 2.9574e-08 1.0000e+00 hypermethylated 3.5549e-01 5.0358e-06 hypermethylated 3.8737e-04 hypermethylated 0.7770701 0.3076923 0.4760813 8 0.8091845 0.3509188 0.45826571 6.2661e-42 1.0000e+00 hypermethylated 6.2661e-39 1.0000e+00 hypermethylated 1.0978e-15 1.0000e+00 hypermethylated 5.4889e-13 1.0000e+00 hypermethylated 0.41099385 5.5379e-04 hypermethylated 0.043130 hypermethylated 0.8274031 0.4256816 4.0412e-01 8 0.8377046 0.417105 0.4205998 6.7790e-29 9.9941e-01 hypermethylated 1.3558e-26 1.0000e+00 hypermethylated 1.2130e-06 9.9433e-01 hypermethylated 8.6646e-05 1.0000e+00 hypermethylated 0.3610792 6.1503e-06 hypermethylated 6.1503e-04 hypermethylated 0.827403 0.3076923 0.52093973 8 0.837705 0.3509188 0.48678583 1.4935e-33 1.0000e+00 hypermethylated 1.4935e-30 1.0000e+00 hypermethylated 1.4791e-11 1.0000e+00 hypermethylated 1.4791e-08 1.0000e+00 hypermethylated 0.4165792 1.9466e-04 hypermethylated 0.0491193 hypermethylated 0.4256816 0.3076923 0.15652120 8 0.417105 0.3509188 0.0661860 2.4187e-02 2.5123e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 1.3875e-01 1.0597e-01 insignificant 1.0000e+00 7.7353e-01 insignificant 0.0555000 4.1811e-01 insignificant 1.0000000 insignificant chr11 64566450 64567450 38856 SAC3D1 ENSG00000168061 0.848085 402 10 0.749596 328 10 0.7129499 262 9 0.8792611 331 10 0.8265969 133 9 0.8295713 701 10 0.7240780 259 10 0.7960723 272 10 0.7707408 268 9 0.7096156 200 8 0.8629403 489 10 0.768425 140 8 0.9128099 245 9 0.819371 78 5 0.8295632 218 9 0.7185897 141 8 0.8470732 92 6 0.7904902 265 9 0.8422360 248 8 0.773239 572 9 0.7371181 175 10 0.6958720 175 7 0.867118 344 10 0.749814 234 8 0.7482399 149 10 0.7032148 383 10 0.761590 257 10 0.767173 196 10 0.773360 235 10 0.9030270 345 10 0.8656432 371 10 0.8389189 693 10 0.8337062 256 10 0.8114102 178 8 0.8434074 430 8 0.6738609 126 9 0.658878 286 10 0.7483599 335 10 0.8513663 419 10 0.8927383 543 10 0.8817097 308 9 0.8465802 303 8 0.8569498 389 10 0.8664451 0.7431793 0.7549466 0.8792786 0.85520544 0.833067 0.7925758 0.7854946 0.8103503 0.8682722 0.8824536 0.7980664 0.9117821 0.866212 0.8846317 0.7438796 0.8781423 0.8471636 0.8620187 0.8606489 0.8263118 0.8015759 0.860186 0.7563639 0.8513803 0.8026477 0.773635 0.7627659 0.8025805 0.9080646 0.8664154 0.8539665 0.8152007 0.8444194 0.85965796 0.76229873 0.744006 0.8372105 0.8691498 0.8893471 0.9039188 0.8976043 0.8622605 7 0.8337773 0.8355356 0.00455427 10 0.823211 0.8035179 0.0196931 0.69018521 0.92409426 insignificant 1.00000 1.00000 insignificant 4.8994e-01 0.99357614 insignificant 1.0000000 1.00000 insignificant 0.01630776 0.4967026 insignificant 1 insignificant 0.8337182 0.8410925 0.0103596 10 0.809612 0.777395 0.0322165 6.3949e-01 9.4205e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.3596e-01 9.7490e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.8961e-02 3.1146e-01 insignificant 1.0000e+00 insignificant 0.8344901 0.8659531 -0.0481195 10 0.8356019 0.8781727 -0.04257082 9.9998e-01 1.6135e-03 weaklyHypometh 1.0000e+00 1.2337e-01 insignificant 9.9991e-01 2.5056e-03 weaklyHypometh 1.0000e+00 1.9274e-01 insignificant -0.06530368 5.6206e-04 weaklyHypometh 0.043130 weaklyHypometh 0.8356319 0.8410925 5.9580e-03 10 0.8076347 0.777395 0.0302393 3.8428e-01 8.7774e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.4023e-01 9.1714e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0226537 5.7059e-01 insignificant 1.0000e+00 insignificant 0.837624 0.8659531 -0.05266215 10 0.829477 0.8781727 -0.04869538 9.9999e-01 2.7588e-03 weaklyHypometh 1.0000e+00 1.7243e-01 insignificant 1.0000e+00 6.2421e-03 weaklyHypometh 1.0000e+00 6.7530e-01 insignificant -0.0816114 1.9230e-03 weaklyHypometh 0.1923003 insignificant 0.8425638 0.8659531 -0.05481266 10 0.827831 0.8781727 -0.0503418 9.9980e-01 8.1186e-03 weaklyHypometh 1.0000e+00 8.0361e-02 weaklyHypometh 9.9971e-01 1.8760e-02 weaklyHypometh 1.0000e+00 2.2216e-01 insignificant -0.1042651 2.4083e-02 weaklyHypometh 0.3490239 insignificant chr11 64748850 64749850 38861 SLC22A20 ENSG00000197847 0.112451 688 14 0.064471 1130 13 0.0893697 720 13 0.1024340 472 14 0.0877660 493 13 0.2541972 1225 15 0.1008908 775 13 0.0586062 661 13 0.0823784 813 13 0.0711711 616 13 0.0831638 704 13 0.139958 431 13 0.0977293 533 13 0.081614 341 9 0.0540898 770 13 0.0743983 344 13 0.1278048 221 10 0.1230618 570 14 0.1704982 565 12 0.191611 1046 14 0.0716270 312 14 0.0724954 404 13 0.134521 586 14 0.082706 408 13 0.1066169 368 13 0.1061748 1062 14 0.064175 442 13 0.056047 402 14 0.069567 585 13 0.0856425 1153 14 0.1313041 949 14 0.1398812 1130 14 0.0511399 704 13 0.0119860 445 13 0.1315789 636 9 0.1358466 179 8 0.052959 624 14 0.1343343 802 14 0.2118204 852 14 0.2032631 742 14 0.1385832 545 14 0.1367869 582 14 0.1550064 604 14 0.0576305 0.0448433 0.0699804 0.0389192 0.05494648 0.074042 0.0814826 0.0577365 0.0627233 0.0617802 0.0625982 0.0509389 0.0645877 0.052505 0.0400523 0.0569966 0.0686577 0.0357711 0.0825576 0.0349163 0.0328210 0.0376142 0.065059 0.0735928 0.0440891 0.0324331 0.044184 0.0454207 0.0447409 0.0311881 0.0629671 0.0732675 0.0453069 0.0111561 0.04549494 0.03931546 0.037339 0.0728981 0.0608642 0.0529524 0.0504928 0.0516436 0.0460565 13 0.0721311 0.0610178 0.01067521 14 0.150954 0.1167302 0.0342241 0.03291151 0.97721002 weaklyHypermeth 1.00000 1.00000 insignificant 5.8918e-02 0.99466468 insignificant 1.0000000 1.00000 insignificant 0.01498691 0.2914015 insignificant 1 insignificant 0.0722129 0.0436578 0.0218853 14 0.191639 0.103827 0.0878118 7.9286e-06 9.9765e-01 weaklyHypermeth 1.0861e-04 1.0000e+00 weaklyHypermeth 1.6343e-06 9.9996e-01 weaklyHypermeth 7.7822e-05 1.0000e+00 weaklyHypermeth 2.2076e-02 3.9925e-01 insignificant 1.0000e+00 insignificant 0.0722129 0.0787970 0.0092622 14 0.1916389 0.1818028 0.00983613 1.7218e-02 1.1524e-02 weaklyHypermeth 4.0042e-01 3.9736e-01 insignificant 4.2972e-02 4.8964e-02 weaklyHypermeth 9.9934e-01 1.0000e+00 insignificant -0.06070875 1.3785e-02 weaklyHypometh 0.382918 insignificant 0.0611197 0.0436707 1.1666e-02 14 0.1322942 0.110749 0.0215453 3.8311e-04 8.2310e-01 weaklyHypermeth 4.2100e-03 1.0000e+00 weaklyHypermeth 6.1527e-05 9.9107e-01 weaklyHypermeth 2.6751e-03 1.0000e+00 weaklyHypermeth 0.0070888 7.7415e-01 insignificant 1.0000e+00 insignificant 0.061120 0.0779886 -0.00038635 14 0.132294 0.1439230 -0.01162875 2.6456e-01 2.1986e-04 weaklyHypometh 1.0000e+00 2.7483e-02 weaklyHypometh 3.1951e-01 1.9526e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0756957 5.1976e-03 weaklyHypometh 0.3712578 insignificant 0.0436578 0.0787970 -0.01546423 14 0.103827 0.1818028 -0.0779757 9.7246e-01 2.1089e-07 weaklyHypometh 1.0000e+00 1.0042e-05 weaklyHypometh 9.9993e-01 1.7589e-05 weaklyHypometh 1.0000e+00 1.5990e-03 weaklyHypometh -0.0827845 1.4950e-02 weaklyHypometh 0.2786729 insignificant chr11 64993450 64994450 38872 ENSG00000173727 0.753683 286 11 0.560076 244 9 0.4369630 83 9 0.6495154 266 9 0.6537037 71 9 0.6923590 273 9 0.6536616 107 9 0.5575666 101 7 0.6773810 47 5 0.7037037 54 7 0.5953615 256 7 0.777778 34 2 0.7061724 119 7 0.630566 103 7 0.6968013 70 5 0.6666667 57 4 0.5833333 8 0 0.7153666 306 10 0.7475634 136 9 0.738333 165 8 0.7063492 38 5 0.7000000 11 0 0.787732 182 11 0.839418 59 7 0.6673789 55 5 0.6899739 251 9 0.691005 48 7 0.765306 21 2 0.692692 204 9 0.7423261 241 9 0.8235154 242 9 0.7156322 188 9 0.5148968 168 7 0.6667582 82 7 0.5472866 116 9 0.6500000 15 0 0.715985 139 7 0.6403427 301 9 0.7667500 289 9 0.8390543 270 9 0.6294134 233 9 0.7491152 193 7 0.7639837 223 9 0.8035562 0.6778757 0.6490073 0.7709110 0.72413793 0.732901 0.7544410 0.7621574 0.7268747 0.7858238 0.7353356 0.8850575 0.7917794 0.727296 0.8237548 0.7586207 0.7645376 0.7663699 0.7632789 0.7880529 0.7412516 0.7461179 0.868818 0.8607006 0.7651783 0.7754429 0.789546 0.6792464 0.7831531 0.8254073 0.8702390 0.7723248 0.6308576 0.7050766 0.49686520 0.64942529 0.810064 0.8123051 0.7637410 0.8194635 0.7399898 0.7016713 0.7937400 0 0.7477380 0.8292208 -0.04088125 8 0.617312 0.7740352 -0.1567227 0.99993243 0.00685450 weaklyHypometh 1.00000 0.74432 insignificant 9.9949e-01 0.08464378 insignificant 1.0000000 1.00000 insignificant -0.07528302 0.0046319 weaklyHypometh 1 insignificant 0.7497307 0.7088916 0.0415627 8 0.690891 0.627241 0.0636504 2.8356e-03 8.7731e-01 weaklyHypermeth 2.3435e-02 1.0000e+00 weaklyHypermeth 1.1277e-01 9.8972e-01 insignificant 7.7977e-01 1.0000e+00 insignificant 3.7283e-02 3.2920e-01 insignificant 1.0000e+00 insignificant 0.7497307 0.8187086 -0.0328761 8 0.6908911 0.6901549 0.00073621 9.0313e-01 4.6946e-02 weaklyHypometh 1.0000e+00 9.3893e-01 insignificant 7.7197e-01 1.4094e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.08983554 5.4790e-02 insignificant 1.000000 insignificant 0.8291098 0.7102689 7.4486e-02 9 0.7552048 0.651733 0.1034718 3.9045e-04 9.7853e-01 weaklyHypermeth 4.2440e-03 1.0000e+00 weaklyHypermeth 2.0353e-02 9.9979e-01 weaklyHypermeth 1.9760e-01 1.0000e+00 insignificant 0.1125658 1.2802e-02 weaklyHypermeth 2.1698e-01 insignificant 0.829110 0.8184080 0.01522360 9 0.755205 0.6643344 0.09087038 3.8671e-01 4.3062e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.4829e-01 5.3356e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0145525 7.1223e-01 insignificant 1.0000000 insignificant 0.7088916 0.8187086 -0.07958791 9 0.627241 0.6901549 -0.0629142 9.0891e-01 1.4253e-03 weaklyHypometh 1.0000e+00 2.0656e-02 weaklyHypometh 9.7376e-01 4.9912e-02 weaklyHypometh 1.0000e+00 4.4170e-01 insignificant -0.1271184 2.2738e-02 weaklyHypometh 0.3343814 insignificant chr11 65014050 65015050 38876 ENSG00000173727 0.634156 170 5 0.557318 102 5 0.7386243 62 5 0.5465038 151 5 0.8580952 63 5 0.7110164 175 5 0.6103030 64 5 0.6605442 80 6 0.6165842 56 4 0.5764860 51 4 0.7365132 136 6 0.320000 23 1 0.6902222 79 5 0.732143 18 1 0.5431217 71 5 0.7208333 25 2 0.5333333 20 3 0.6583333 160 5 0.6977778 120 5 0.573452 179 5 0.6717949 42 4 0.5292929 59 3 0.577333 93 5 0.589487 51 3 0.5943695 228 4 0.5849206 136 5 0.523714 93 4 0.520833 30 2 0.680603 108 5 0.7462645 162 6 0.6148711 188 5 0.7122386 211 5 0.4574105 133 5 0.5098485 113 5 0.7757296 84 3 0.5000000 60 3 0.441310 79 5 0.4380401 185 5 0.5276190 123 5 0.4543963 144 5 0.6220252 123 5 0.6694712 110 4 0.5618511 138 5 0.7744078 0.7160293 0.6778860 0.7465035 0.86924242 0.778884 0.7006887 0.7055736 0.7592447 0.6621212 0.8677108 0.3522727 0.7312374 0.707930 0.6928060 0.7884986 0.8345687 0.7305871 0.7928932 0.8402239 0.7224359 0.6738292 0.791047 0.6323100 0.7452031 0.8208333 0.663101 0.6789773 0.6962095 0.8135287 0.8130179 0.8013841 0.6964318 0.6307679 0.70789476 0.77272727 0.538889 0.7164009 0.6705357 0.6554582 0.7788221 0.7047145 0.7060038 3 0.6941828 0.7181688 0.00267889 5 0.619747 0.6139363 0.0058102 0.72921524 0.68953924 insignificant 1.00000 1.00000 insignificant 6.4542e-01 0.72304869 insignificant 1.0000000 1.00000 insignificant 0.02362450 0.4830357 lowCoverage 1 lowCoverage 0.6950000 0.5428135 0.1330531 5 0.656371 0.493244 0.1631266 4.6043e-05 9.8585e-01 weaklyHypermeth 5.3539e-04 1.0000e+00 weaklyHypermeth 6.9008e-03 9.7253e-01 weaklyHypermeth 8.6260e-02 1.0000e+00 weaklyHypermeth 1.1538e-01 8.5528e-02 lowCoverage 8.8174e-01 lowCoverage 0.6950000 0.5438871 0.1031306 5 0.6563709 0.5234659 0.13290507 8.1775e-07 5.0336e-01 weaklyHypermeth 6.8146e-05 1.0000e+00 weaklyHypermeth 2.0393e-03 5.5235e-01 weaklyHypermeth 1.2745e-01 1.0000e+00 insignificant 0.06869551 1.6474e-01 lowCoverage 1.000000 lowCoverage 0.7201439 0.5428135 1.3602e-01 5 0.6537590 0.493244 0.1605147 2.2626e-04 9.9641e-01 weaklyHypermeth 2.5423e-03 1.0000e+00 weaklyHypermeth 6.4390e-02 9.8245e-01 insignificant 5.0304e-01 1.0000e+00 insignificant 0.0917537 1.5185e-01 lowCoverage 1.0000e+00 lowCoverage 0.720144 0.5438871 0.11629970 5 0.653759 0.5234659 0.13029318 6.7945e-05 4.1130e-01 weaklyHypermeth 5.2265e-03 1.0000e+00 weaklyHypermeth 1.3700e-02 5.5113e-01 weaklyHypermeth 4.0931e-01 1.0000e+00 insignificant 0.0450710 3.3125e-01 lowCoverage 1.0000000 lowCoverage 0.5428135 0.5438871 -0.01061011 5 0.493244 0.5234659 -0.0302215 6.2039e-01 2.0845e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.8078e-01 2.9439e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0466827 4.8778e-01 lowCoverage 1.0000000 lowCoverage chr11 65175850 65176850 38882 SIPA1 ENSG00000213445 0.014667 932 31 0.024576 612 31 0.0123466 748 31 0.0024114 753 26 0.0188244 435 28 0.0634260 1104 31 0.0222981 822 31 0.0337662 744 31 0.0080822 1068 31 0.0439464 850 27 0.0217093 721 31 0.016232 860 27 0.0056254 875 31 0.025659 316 14 0.0152258 929 31 0.0048387 646 27 0.0032628 609 27 0.0236280 995 29 0.0095516 524 31 0.063224 920 31 0.0324572 361 23 0.0694444 525 23 0.033394 507 31 0.037973 318 23 0.0145165 433 24 0.0387987 1019 31 0.049545 376 25 0.023514 306 25 0.019804 519 31 0.0079340 936 31 0.0038005 859 31 0.0142467 1113 31 0.0032759 647 30 0.0063050 482 31 0.0338028 550 20 0.0000000 278 19 0.072487 317 23 0.0050085 776 31 0.0078239 1006 30 0.0120720 978 31 0.0338610 754 29 0.0079325 1064 31 0.0111074 1012 28 0.0118444 0.0326596 0.0162380 0.0038208 0.02522721 0.025556 0.0265165 0.0029736 0.0067287 0.0173155 0.0237207 0.0127824 0.0073017 0.019710 0.0166141 0.0035180 0.0057905 0.0096721 0.0116565 0.0240789 0.0339575 0.0014472 0.032132 0.0285094 0.0081425 0.0075354 0.022286 0.0282601 0.0237351 0.0066457 0.0044142 0.0127655 0.0040193 0.0085032 0.00038401 0.00000000 0.040523 0.0061450 0.0096480 0.0129624 0.0030523 0.0102854 0.0095613 19 0.0131281 0.0137514 0.00039129 31 0.037809 0.0445944 -0.0067852 0.50988463 0.33686874 insignificant 1.00000 1.00000 insignificant 5.4860e-01 0.27834814 insignificant 1.0000000 1.00000 insignificant -0.00712057 0.3002567 insignificant 1 insignificant 0.0130038 0.0075410 0.0059057 31 0.029117 0.036080 -0.0069630 4.5584e-02 9.2674e-01 weaklyHypermeth 3.0390e-01 1.0000e+00 insignificant 3.2665e-02 9.9226e-01 weaklyHypermeth 2.7918e-01 1.0000e+00 insignificant 1.5185e-03 9.0531e-01 insignificant 1.0000e+00 insignificant 0.0127516 0.0087246 0.0036303 31 0.0148480 0.0236488 -0.00880077 6.0700e-01 7.6897e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.5148e-01 8.9585e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00710571 2.8529e-01 insignificant 1.000000 insignificant 0.0137627 0.0075410 5.9837e-03 31 0.0459060 0.036080 0.0098257 2.3022e-01 9.9949e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.1248e-01 1.0000e+00 insignificant 7.9906e-01 1.0000e+00 insignificant 0.0086391 5.2082e-01 insignificant 1.0000e+00 insignificant 0.013497 0.0087246 0.00413051 31 0.035176 0.0236488 0.01152702 5.4723e-01 6.7798e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.7905e-01 8.8198e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0142263 7.3894e-02 insignificant 1.0000000 insignificant 0.0075435 0.0087246 -0.00153135 31 0.037174 0.0236488 0.0135248 9.9995e-01 2.5134e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.0000e+00 5.4955e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0055872 6.7129e-01 insignificant 1.0000000 insignificant chr11 65176550 65177550 38883 SIPA1 ENSG00000213445 0.026136 1406 45 0.015050 1159 45 0.0092433 1163 45 0.0041303 1070 34 0.0094295 841 42 0.0533029 1849 45 0.0125895 1354 45 0.0276477 1096 45 0.0090297 1348 45 0.0360427 1158 41 0.0196086 1271 45 0.016482 1231 41 0.0049330 1215 45 0.024499 484 22 0.0092020 1338 45 0.0078993 928 41 0.0041572 714 32 0.0164972 1729 41 0.0502273 1065 45 0.045046 1706 45 0.0422631 656 37 0.0534188 509 25 0.047344 804 45 0.036005 590 36 0.0241972 412 26 0.0312896 1708 45 0.061545 971 39 0.018514 474 39 0.042003 958 45 0.0119671 1592 45 0.0064892 1691 45 0.0123897 1857 45 0.0021302 975 44 0.0040575 954 45 0.0457746 976 33 0.0000000 293 19 0.064382 619 34 0.0044315 1565 45 0.0123752 1732 42 0.0133815 1615 45 0.0241181 1104 41 0.0091582 1751 43 0.0165314 1428 40 0.0111459 0.0160350 0.0104434 0.0053982 0.01390762 0.020397 0.0135884 0.0054396 0.0086538 0.0153707 0.0187780 0.0152779 0.0043756 0.018422 0.0083629 0.0073967 0.0088808 0.0112047 0.0089022 0.0156173 0.0231434 0.0064884 0.023132 0.0222545 0.0330549 0.0090656 0.017870 0.0168157 0.0167516 0.0113034 0.0065916 0.0119022 0.0021522 0.0050034 0.00035727 0.00081698 0.023361 0.0037888 0.0066304 0.0117989 0.0033047 0.0118986 0.0061295 27 0.0123575 0.0148936 -0.00114476 45 0.038224 0.0570552 -0.0188314 0.90082940 0.38163006 insignificant 1.00000 1.00000 insignificant 9.4666e-01 0.33114117 insignificant 1.0000000 1.00000 insignificant -0.01222776 0.0608383 insignificant 1 insignificant 0.0122796 0.0046451 0.0092037 45 0.034754 0.036160 -0.0014064 1.8332e-03 9.9380e-01 weaklyHypermeth 1.5668e-02 1.0000e+00 weaklyHypermeth 5.2867e-03 9.9965e-01 weaklyHypermeth 6.9562e-02 1.0000e+00 weaklyHypermeth -7.1602e-05 9.9537e-01 insignificant 1.0000e+00 insignificant 0.0121162 0.0090433 0.0027148 45 0.0246641 0.0227521 0.00191204 5.5815e-01 9.5338e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.7069e-01 9.9796e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00494474 2.6113e-01 insignificant 1.000000 insignificant 0.0149046 0.0046451 1.0699e-02 45 0.0614440 0.036160 0.0252838 5.6665e-03 9.9997e-01 weaklyHypermeth 4.9274e-02 1.0000e+00 weaklyHypermeth 4.1596e-03 1.0000e+00 weaklyHypermeth 5.6211e-02 1.0000e+00 weaklyHypermeth 0.0121562 3.6027e-01 insignificant 1.0000e+00 insignificant 0.014666 0.0090456 0.00391184 45 0.045002 0.0236443 0.02135743 3.9547e-01 9.7046e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.9600e-01 9.9810e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0171725 9.1333e-03 weaklyHypermeth 0.5108832 insignificant 0.0046494 0.0090492 -0.00637742 45 0.038374 0.0246094 0.0137647 1.0000e+00 1.3944e-01 insignificant 1.0000e+00 8.8392e-01 insignificant 1.0000e+00 6.4710e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0050163 6.8210e-01 insignificant 1.0000000 insignificant chr11 65391450 65392450 38886 MUS81 ENSG00000172732 0.067537 285 9 0.163579 265 9 0.3454158 323 8 0.1367783 329 9 0.3256669 163 9 0.2218970 573 9 0.2306599 252 9 0.2905014 324 9 0.2358026 330 8 0.2512104 513 8 0.2054801 365 9 0.172370 329 9 0.6200441 350 8 0.262672 269 8 0.4825017 287 8 0.0151515 159 8 0.5612245 33 4 0.2810698 356 8 0.5333460 267 8 0.538817 354 8 0.0806878 119 7 0.0830955 213 8 0.112586 231 9 0.217463 198 9 0.3500000 88 4 0.2967867 300 9 0.128625 213 8 0.473086 174 8 0.164476 240 8 0.5146485 376 9 0.2354125 369 9 0.0422178 460 9 0.5660101 204 9 0.6555780 210 6 0.6803727 298 7 0.5699856 43 4 0.578264 188 9 0.4189585 319 9 0.0494948 395 9 0.1977358 358 9 0.1138138 225 9 0.1261685 350 6 0.2215218 364 8 0.0265743 0.1392853 0.3305017 0.1126766 0.22806185 0.110670 0.2858962 0.1189332 0.1438247 0.1190935 0.1641808 0.1095832 0.5310346 0.279092 0.4494713 0.0289645 0.3629352 0.1610977 0.5805955 0.4905515 0.0710034 0.0619703 0.090348 0.0995907 0.1333647 0.4200239 0.111830 0.3914977 0.1513928 0.5184169 0.2443950 0.0658268 0.5886074 0.6293772 0.63556774 0.50502881 0.609160 0.4947820 0.0432734 0.1807451 0.1149512 0.1521337 0.1717192 6 0.2443683 0.2037597 0.02926212 9 0.359478 0.2679641 0.0915140 0.40406854 0.97874279 insignificant 1.00000 1.00000 insignificant 1.5111e-01 0.99997685 insignificant 1.0000000 1.00000 insignificant 0.07216247 0.2304993 insignificant 1 insignificant 0.2442411 0.5571429 -0.3326956 9 0.363500 0.566731 -0.2032305 1.0000e+00 7.7876e-19 hypomethylated 1.0000e+00 7.7876e-16 hypomethylated 9.9983e-01 2.1482e-09 hypomethylated 1.0000e+00 2.1482e-06 hypomethylated -2.8111e-01 7.3621e-05 hypomethylated 4.3307e-03 hypomethylated 0.2435310 0.1276596 0.0925629 9 0.2509821 0.1449689 0.10601319 4.9420e-03 9.9987e-01 weaklyHypermeth 1.4976e-01 1.0000e+00 insignificant 4.1291e-03 9.9929e-01 weaklyHypermeth 1.7757e-01 1.0000e+00 insignificant 0.15533931 5.4407e-03 weaklyHypermeth 0.201451 insignificant 0.2039651 0.5574941 -3.6240e-01 9 0.3228187 0.597679 -0.2748601 9.9999e-01 4.9717e-16 hypomethylated 1.0000e+00 4.9717e-13 hypomethylated 1.0000e+00 6.7248e-09 hypomethylated 1.0000e+00 6.7248e-06 hypomethylated -0.3532710 2.0536e-05 hypomethylated 1.8669e-03 hypomethylated 0.202634 0.1276596 0.06442438 9 0.215125 0.1449689 0.07015646 4.2334e-02 9.9803e-01 weaklyHypermeth 8.1412e-01 1.0000e+00 insignificant 1.3990e-01 9.8057e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0831768 1.4802e-01 insignificant 1.0000000 insignificant 0.5569721 0.1276596 0.43557326 9 0.596389 0.1449689 0.4514203 2.3898e-22 1.0000e+00 hypermethylated 2.3898e-19 1.0000e+00 hypermethylated 3.5467e-09 1.0000e+00 hypermethylated 3.5467e-06 1.0000e+00 hypermethylated 0.4364479 8.9121e-06 hypermethylated 0.0029707 hypermethylated chr11 65545550 65546550 38893 CST6 ENSG00000175315 0.664776 493 14 0.617856 631 15 0.6570358 524 14 0.6874930 512 12 0.6284694 363 13 0.6929026 528 15 0.5773795 550 15 0.6322380 469 14 0.6640114 450 13 0.6441489 386 14 0.7250662 616 15 0.574909 352 11 0.6869994 452 14 0.593598 214 12 0.7257042 379 14 0.6013712 259 10 0.6395470 898 10 0.6441825 532 12 0.6876866 498 14 0.795803 410 15 0.6376550 226 14 0.6301470 224 12 0.735343 393 15 0.579167 187 15 0.5238485 325 12 0.6874414 708 16 0.614538 268 14 0.611043 157 11 0.597567 505 14 0.6983753 754 15 0.6644306 690 16 0.6866303 537 15 0.6176802 482 14 0.5660488 461 14 0.7534619 549 14 0.5260684 138 9 0.493891 359 15 0.6566265 671 15 0.6516272 492 14 0.6366410 576 17 0.6549041 570 12 0.6338709 310 12 0.7492797 630 18 0.7319165 0.6424434 0.5790992 0.6298012 0.60838597 0.715266 0.5746349 0.6150909 0.6249672 0.5950361 0.6941490 0.5970243 0.6101777 0.634648 0.6659625 0.6166243 0.6820516 0.7060707 0.7205473 0.7364913 0.5301094 0.5695953 0.682780 0.5943312 0.4989736 0.6618141 0.631245 0.6608087 0.6925168 0.6413041 0.6449470 0.7233374 0.5366224 0.5159424 0.57794217 0.60308009 0.535385 0.6389201 0.6844397 0.6270482 0.6881730 0.6966726 0.6549558 9 0.7412977 0.7263221 0.01356786 14 0.639987 0.6252049 0.0147821 0.23359116 0.73550079 insignificant 1.00000 1.00000 insignificant 7.0448e-01 0.90602069 insignificant 1.0000000 1.00000 insignificant 0.01820999 0.3933647 insignificant 1 insignificant 0.7410489 0.6667920 0.0721813 14 0.637764 0.559606 0.0781582 1.5179e-03 5.7660e-01 weaklyHypermeth 1.3675e-02 1.0000e+00 weaklyHypermeth 1.4305e-02 8.8396e-01 weaklyHypermeth 1.4338e-01 1.0000e+00 insignificant 5.4763e-02 2.2557e-01 insignificant 1.0000e+00 insignificant 0.7412470 0.7137316 -0.0068772 13 0.6348024 0.6432141 -0.00841171 4.1817e-02 3.8459e-01 inconclusive 8.1993e-01 1.0000e+00 insignificant 4.0921e-01 1.6122e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00820576 7.4896e-01 insignificant 1.000000 insignificant 0.7260826 0.6677966 4.5102e-02 14 0.6025149 0.610479 -0.0079638 6.4697e-02 3.1667e-01 insignificant 4.2286e-01 1.0000e+00 insignificant 2.0055e-01 7.5827e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0365527 4.1572e-01 insignificant 1.0000e+00 insignificant 0.726322 0.7140085 -0.02316807 13 0.625205 0.6679531 -0.04274815 7.5697e-01 2.5042e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 8.3206e-01 6.9319e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0264157 3.5809e-01 insignificant 1.0000000 insignificant 0.6675452 0.7117117 -0.08373571 13 0.583936 0.6300774 -0.0461412 2.0637e-01 9.4918e-02 insignificant 1.0000e+00 6.2859e-01 insignificant 7.6858e-01 9.5965e-02 insignificant 1.0000e+00 7.0563e-01 insignificant -0.0629684 1.9398e-01 insignificant 1.0000000 insignificant chr11 65932650 65933650 38909 ENSG00000202317 0.014568 1889 35 0.012122 952 32 0.0091215 990 32 0.0062529 1576 32 0.0080290 615 32 0.0586246 2160 33 0.0375484 1043 35 0.0415729 794 35 0.0249024 1017 35 0.0142450 1096 35 0.0197746 838 32 0.030935 738 35 0.0072110 830 34 0.010999 509 20 0.0082301 1175 32 0.0289498 673 34 0.0249945 370 24 0.1381766 3171 32 0.0249648 906 32 0.018183 1692 33 0.0173292 641 34 0.0074714 950 34 0.024373 921 35 0.016804 684 32 0.0064501 1024 32 0.0070215 1273 32 0.055431 1096 34 0.072614 540 34 0.054311 903 32 0.0188423 1288 32 0.0191651 1438 32 0.0301960 1741 35 0.0096830 587 29 0.0023651 1085 32 0.0106912 503 20 0.0357143 483 25 0.046530 593 32 0.0060923 1285 32 0.0330988 2135 32 0.0206987 1811 32 0.0055459 1364 32 0.0037883 2395 32 0.0095722 1859 34 0.0128159 0.0133148 0.0172047 0.0095705 0.01364896 0.032545 0.0130278 0.0144955 0.0247188 0.0054945 0.0134335 0.0095006 0.0076089 0.015754 0.0088908 0.0309912 0.0272980 0.0083939 0.0294290 0.0245488 0.0198308 0.0133927 0.035044 0.0228210 0.0100956 0.0105487 0.015087 0.0348670 0.0156557 0.0106707 0.0083250 0.0193245 0.0128721 0.0045806 0.01356150 0.00186620 0.030676 0.0119213 0.0102266 0.0118101 0.0111013 0.0064745 0.0131698 31 0.0155422 0.0155212 0.00070421 33 0.054109 0.0394755 0.0146339 0.09551552 0.98836767 insignificant 1.00000 1.00000 insignificant 2.2850e-01 0.99688373 insignificant 1.0000000 1.00000 insignificant -0.00053041 0.9538755 insignificant 1 insignificant 0.0153024 0.0143298 0.0028250 33 0.027169 0.028878 -0.0017088 3.8066e-02 9.9286e-01 weaklyHypermeth 2.5599e-01 1.0000e+00 insignificant 3.3373e-02 9.9984e-01 weaklyHypermeth 2.7918e-01 1.0000e+00 insignificant 8.4576e-03 4.0725e-01 insignificant 1.0000e+00 insignificant 0.0155076 0.0079465 0.0062383 32 0.0545873 0.0317865 0.02280079 2.0826e-02 9.9070e-01 weaklyHypermeth 4.6280e-01 1.0000e+00 insignificant 2.1966e-01 9.7986e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01242948 1.6600e-01 insignificant 1.000000 insignificant 0.0155561 0.0143298 2.5777e-03 33 0.0462152 0.028878 0.0173376 5.5881e-01 9.6842e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.4094e-01 9.9768e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0089880 3.7154e-01 insignificant 1.0000e+00 insignificant 0.014919 0.0079465 0.00570707 32 0.021197 0.0317865 -0.01058902 9.2824e-01 9.9252e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8667e-01 9.9695e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0129599 1.4359e-01 insignificant 1.0000000 insignificant 0.0141280 0.0079523 0.00381963 32 0.022990 0.0369410 -0.0139506 9.7730e-01 7.3203e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.0000e+00 8.9561e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0039719 6.7648e-01 insignificant 1.0000000 insignificant chr11 66224550 66225550 38913 RBM4B ENSG00000173914 0.960955 720 21 0.787274 357 21 0.9447076 478 19 0.9279229 679 20 0.8354328 254 14 0.9313253 805 21 0.8651853 255 13 0.9054846 393 16 0.9407274 268 13 0.9396769 378 15 0.9118971 578 19 0.879703 168 10 0.8957379 440 19 0.895552 201 11 0.8828924 336 13 0.8524510 90 8 0.8227273 66 5 0.8945749 846 21 0.9348635 611 19 0.944734 585 22 0.8868866 237 16 0.9138588 342 14 0.949476 533 26 0.812085 224 16 0.9647081 339 14 0.9427353 469 27 0.868241 427 17 0.636293 150 8 0.866657 441 19 0.9346476 476 27 0.8605065 400 27 0.8888036 711 23 0.8246061 377 24 0.8670210 397 19 0.9057349 462 21 0.8803922 237 11 0.674526 223 12 0.8484668 427 22 0.9244887 762 20 0.9465871 687 25 0.8958386 618 20 0.9259326 720 20 0.9384047 730 21 0.9467522 0.8585635 0.9345508 0.9619544 0.95970755 0.930856 0.8980588 0.9088677 0.9489281 0.9386092 0.9409825 0.9114726 0.9452392 0.913343 0.9222621 0.9584733 0.8267826 0.9226169 0.9325558 0.9216395 0.8904525 0.8970814 0.921760 0.9440307 0.9387655 0.9605236 0.918668 0.8871809 0.9023198 0.9046163 0.9360152 0.9380256 0.8485990 0.8877140 0.79982262 0.94158669 0.838140 0.9044967 0.9453839 0.9511851 0.9427094 0.9328632 0.9281099 8 0.9324944 0.9231417 0.00625645 22 0.900290 0.7636601 0.1366303 0.49163096 0.79584771 insignificant 1.00000 1.00000 insignificant 3.8698e-01 0.86214189 insignificant 1.0000000 1.00000 insignificant 0.02061633 0.4635429 insignificant 1 insignificant 0.9325803 0.8671065 0.0645103 22 0.922899 0.806417 0.1164822 2.6509e-10 9.8997e-01 weaklyHypermeth 6.9761e-09 1.0000e+00 weaklyHypermeth 1.0349e-02 9.8857e-01 weaklyHypermeth 1.1498e-01 1.0000e+00 insignificant 6.4233e-02 1.1874e-01 insignificant 1.0000e+00 insignificant 0.9325803 0.9513790 -0.0123291 20 0.9228991 0.9403017 -0.01740254 9.9876e-01 2.0026e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9967e-01 2.5670e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02855911 4.9959e-02 weaklyHypometh 0.960758 insignificant 0.9246518 0.8670438 6.5286e-02 22 0.8392910 0.799964 0.0393268 4.5517e-07 9.7695e-01 weaklyHypermeth 9.6844e-06 1.0000e+00 weaklyHypermeth 1.9809e-02 9.2827e-01 weaklyHypermeth 1.9420e-01 1.0000e+00 insignificant 0.0436171 3.2398e-01 insignificant 1.0000e+00 insignificant 0.924652 0.9516221 -0.01974389 20 0.839291 0.9494228 -0.11013188 9.9957e-01 2.1632e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9948e-01 2.5179e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0491754 8.8856e-02 insignificant 1.0000000 insignificant 0.8675153 0.9513652 -0.06318476 20 0.833297 0.9383117 -0.1050143 9.9563e-01 1.9786e-04 weaklyHypometh 1.0000e+00 3.8763e-03 weaklyHypometh 9.9851e-01 6.9132e-02 insignificant 1.0000e+00 5.6665e-01 insignificant -0.0927925 3.9505e-02 weaklyHypometh 0.5130507 insignificant chr11 66474950 66475950 38930 PC ENSG00000173599 0.697583 73 6 0.541624 128 6 0.8439394 41 6 0.8316993 66 5 0.8619048 33 5 0.8687682 179 6 0.6296296 19 1 0.8579646 103 6 0.7205215 38 4 0.7058215 80 5 0.7813038 193 6 0.541667 12 0 0.6983431 117 6 0.835867 65 6 0.8309524 40 6 1.0000000 9 0 0.1666667 4 0 0.8737875 90 4 0.5805506 89 4 0.635612 111 6 0.6303351 61 7 0.9500000 52 4 0.652778 35 3 0.857527 65 6 0.5527778 54 4 0.8343728 206 6 0.661905 49 6 0.470988 31 3 0.693016 110 6 0.8038670 220 6 0.8029380 180 6 0.6009676 143 6 0.7819745 90 6 0.7539683 41 4 0.7803030 55 4 0.4000000 5 0 0.658398 81 6 0.4445286 108 4 0.6875000 30 2 0.7718198 104 6 0.7050866 39 4 0.9291667 23 2 0.6484729 81 6 0.7417540 0.7480556 0.7983225 0.8354342 0.88775510 0.868350 0.7321429 0.8738863 0.7018141 0.7998168 0.8077378 0.5758929 0.7382519 0.856516 0.8808673 0.9495777 0.4464823 0.9100647 0.7042445 0.7056686 0.7964853 0.9642857 0.665179 0.8559243 0.5520833 0.7795850 0.689031 0.5451389 0.7965068 0.8129957 0.8044872 0.7242498 0.7787633 0.7236395 0.69592127 0.54209184 0.646088 0.4955357 0.7767857 0.7496647 0.7504252 0.9494048 0.7128515 0 0.7932886 0.7927032 -0.00334612 6 0.732117 0.6859644 0.0461521 0.07199809 0.42746970 insignificant 1.00000 1.00000 insignificant 6.2186e-02 0.90433364 insignificant 1.0000000 1.00000 insignificant 0.01592096 0.7837215 lowCoverage 1 lowCoverage 0.7932886 0.6921053 0.0900682 6 0.732117 0.637275 0.0948418 3.3185e-05 3.0067e-01 weaklyHypermeth 4.0969e-04 1.0000e+00 weaklyHypermeth 3.0796e-02 5.2850e-01 weaklyHypermeth 2.7053e-01 1.0000e+00 insignificant 8.8682e-02 3.0494e-01 lowCoverage 1.0000e+00 lowCoverage 0.7932886 0.7400722 0.0360259 6 0.7321165 0.7350878 -0.00297125 2.7439e-01 6.5056e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.5911e-01 6.5651e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02319888 7.2406e-01 lowCoverage 1.000000 lowCoverage 0.7927032 0.6921053 9.6898e-02 6 0.6859644 0.637275 0.0486897 1.5936e-03 5.3541e-01 weaklyHypermeth 1.5472e-02 1.0000e+00 weaklyHypermeth 1.6473e-01 3.5407e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0727606 3.9580e-01 lowCoverage 1.0000e+00 lowCoverage 0.792703 0.7400722 0.04331335 6 0.685964 0.7350878 -0.04912335 9.8758e-02 3.6220e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.8272e-01 2.7281e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0391198 5.5502e-01 lowCoverage 1.0000000 lowCoverage 0.6921053 0.7400722 -0.05389338 6 0.637275 0.7350878 -0.0978130 5.2636e-01 2.2946e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.8977e-01 2.2675e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.1118804 2.2748e-01 lowCoverage 1.0000000 lowCoverage chr11 66568750 66569750 38938 SYT12 ENSG00000173227 0.827524 164 5 0.892790 174 5 0.9199100 197 5 0.9603289 162 3 0.9624820 88 5 0.9315744 292 5 0.9314597 178 5 0.8343991 151 5 0.8997144 232 5 0.9380794 190 5 0.9157948 190 5 0.893924 145 5 0.9497999 205 5 0.941392 94 3 0.8712734 217 5 0.9648225 111 5 0.8857302 65 4 0.7487726 235 3 0.9654459 131 4 0.964548 199 5 0.8913675 78 5 0.4874603 52 3 0.927101 176 5 0.831250 80 5 0.8839847 71 3 0.9467836 274 5 0.908762 78 5 0.922893 154 5 0.814427 95 4 0.9200305 281 5 0.8800031 214 5 0.9280519 250 5 0.5614885 191 5 0.4450784 116 4 0.5921304 174 5 0.6600000 33 2 0.860832 100 5 0.6785286 192 5 0.8524202 164 5 0.9092485 186 5 0.9659134 199 2 0.9416034 153 3 0.8288221 133 3 0.9253756 0.9286235 0.9175190 0.9540057 0.94779593 0.929733 0.9201336 0.9110781 0.9294407 0.9304807 0.8989682 0.8972056 0.9191633 0.944862 0.9327180 0.9791576 0.8304519 0.8720827 0.9683023 0.9530042 0.8492693 0.7537570 0.927221 0.8989415 0.9075578 0.9507121 0.901379 0.9420300 0.8888659 0.9293155 0.9082740 0.9212537 0.5645806 0.1740570 0.49913746 0.78037634 0.853296 0.8669229 0.9296780 0.9263450 0.9467750 0.9712672 0.9066719 2 0.9269006 0.9184692 0.00841170 5 0.916377 0.9052985 0.0110782 0.33066928 0.85719740 insignificant 1.00000 1.00000 insignificant 1.0896e-01 0.92501849 insignificant 1.0000000 1.00000 insignificant 0.04814533 0.2267355 lowCoverage 1 lowCoverage 0.9269006 0.6178660 0.3060487 5 0.916377 0.639277 0.2771001 2.6487e-12 1.0000e+00 hypermethylated 9.4596e-11 1.0000e+00 hypermethylated 1.8021e-06 1.0000e+00 hypermethylated 8.1913e-05 1.0000e+00 hypermethylated 2.7698e-01 3.9424e-03 lowCoverage 9.0718e-02 lowCoverage 0.9269006 0.9413174 -0.0083289 5 0.9163767 0.8938054 0.02257132 3.3029e-01 3.2020e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.7124e-01 4.2452e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01038672 7.3114e-01 lowCoverage 1.000000 lowCoverage 0.9184692 0.6178660 3.0059e-01 5 0.9052985 0.639277 0.2660219 1.0307e-07 9.9997e-01 hypermethylated 2.6428e-06 1.0000e+00 hypermethylated 7.7746e-04 9.9991e-01 hypermethylated 1.6533e-02 1.0000e+00 hypermethylated 0.2288332 7.6478e-03 lowCoverage 1.5016e-01 lowCoverage 0.918469 0.9413174 -0.01549467 5 0.905298 0.8938054 0.01149309 3.6079e-01 2.7708e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.5018e-01 1.1028e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0377586 4.0800e-01 lowCoverage 1.0000000 lowCoverage 0.6178660 0.9413174 -0.33122250 5 0.639277 0.8938054 -0.2545288 9.9931e-01 1.7153e-03 weaklyHypometh 1.0000e+00 2.2570e-02 weaklyHypometh 9.9875e-01 2.5023e-04 hypomethylated 1.0000e+00 1.1916e-02 hypomethylated -0.2665919 3.7955e-03 lowCoverage 0.1084421 lowCoverage chr11 66785450 66786450 38950 KDM2A ENSG00000173120 0.054762 1082 24 0.035424 963 26 0.1017864 1098 27 0.1053900 962 21 0.1255690 664 26 0.0704525 1325 27 0.0357945 1019 27 0.0460276 993 26 0.0438247 1017 27 0.0599565 1102 31 0.0616522 838 27 0.026205 756 26 0.0574278 991 27 0.120025 504 17 0.0316491 1228 27 0.0941377 633 26 0.0035714 554 19 0.0859312 1185 21 0.0756955 842 27 0.059005 1159 27 0.0850391 608 26 0.0554669 674 18 0.076942 738 26 0.078515 590 26 0.0373267 489 21 0.1630414 1159 27 0.031375 824 26 0.054808 456 25 0.072208 887 21 0.0406596 1242 27 0.0869658 1152 27 0.0921659 1514 27 0.0288140 969 26 0.0307408 713 27 0.0023245 808 21 0.0000000 286 14 0.051589 564 21 0.0129019 985 26 0.1257568 1325 24 0.0488674 1062 24 0.0301630 957 22 0.0549100 954 24 0.0633411 1019 23 0.0319399 0.0310759 0.1024190 0.0436696 0.04878753 0.047215 0.0360365 0.0381582 0.0282124 0.0375612 0.0417954 0.0299233 0.0386763 0.038721 0.0214473 0.0444180 0.0264111 0.0265099 0.0224000 0.0225647 0.0722042 0.0177310 0.062089 0.0284561 0.0226205 0.0450125 0.026857 0.0351980 0.0291036 0.0235068 0.0386029 0.0361343 0.0194222 0.0146252 0.00580530 0.00611447 0.038246 0.0128146 0.0280620 0.0230419 0.0103304 0.0276410 0.0587456 20 0.0611716 0.0606911 0.00151207 26 0.068606 0.1142430 -0.0456366 0.26291781 0.97729021 insignificant 1.00000 1.00000 insignificant 3.6961e-01 0.99644015 insignificant 1.0000000 1.00000 insignificant -0.00816178 0.5202434 insignificant 1 insignificant 0.0611608 0.0305202 0.0414711 26 0.062280 0.020778 0.0415014 2.7100e-08 9.9988e-01 weaklyHypermeth 5.1133e-07 1.0000e+00 weaklyHypermeth 7.2361e-08 9.9999e-01 weaklyHypermeth 4.5226e-06 1.0000e+00 weaklyHypermeth 4.3653e-02 1.2639e-03 weaklyHypermeth 3.8131e-02 weaklyHypermeth 0.0611749 0.0635697 0.0063744 24 0.0707503 0.0570991 0.01365114 5.7303e-02 6.0560e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.2919e-02 9.6512e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00010677 9.9542e-01 insignificant 1.000000 insignificant 0.0607146 0.0305202 4.1208e-02 26 0.1216135 0.020778 0.1008350 4.8015e-06 9.8569e-01 weaklyHypermeth 7.8713e-05 1.0000e+00 weaklyHypermeth 4.2660e-04 9.9955e-01 weaklyHypermeth 1.0527e-02 1.0000e+00 weaklyHypermeth 0.0518144 1.0743e-03 weaklyHypermeth 3.4655e-02 weaklyHypermeth 0.060600 0.0635697 0.00545445 23 0.086563 0.0570991 0.02946394 2.3882e-01 1.8900e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.3281e-01 5.5723e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0082686 6.7808e-01 insignificant 1.0000000 insignificant 0.0305273 0.0636056 -0.03712247 23 0.021471 0.0609057 -0.0394346 9.9988e-01 2.7066e-03 weaklyHypometh 1.0000e+00 3.3833e-02 weaklyHypometh 1.0000e+00 7.7057e-03 weaklyHypometh 1.0000e+00 1.2429e-01 insignificant -0.0435459 5.3584e-02 insignificant 0.6284019 insignificant chr11 67068150 67069150 38960 CABP2 ENSG00000167791 0.760787 146 6 0.692174 200 6 0.8422304 84 6 0.8602587 179 6 0.7000000 53 5 0.8301054 286 6 0.7560990 81 6 0.8314023 126 6 0.7213955 82 6 0.8199735 42 5 0.7886917 256 6 0.748106 43 4 0.7705385 117 6 0.872222 60 6 0.7534731 70 6 0.8055556 21 2 0.8834554 143 2 0.7618927 174 6 0.8869649 78 6 0.842202 166 6 0.8251082 56 6 0.8593517 76 6 0.806429 96 6 0.742308 75 6 0.6837963 76 5 0.8676362 246 6 0.875000 70 6 0.754167 37 4 0.865999 92 6 0.8053109 215 6 0.8910880 266 6 0.8446713 221 6 0.4091044 248 6 0.4683642 61 5 0.5862077 198 4 0.2222222 8 0 0.436594 182 6 0.5445673 203 6 0.8581595 103 6 0.8874997 136 6 0.7988880 125 5 0.8830628 40 5 0.7887409 123 6 0.7497205 0.6958330 0.8310287 0.8302833 0.67157974 0.812147 0.7480427 0.7954439 0.7064673 0.8257999 0.7608823 0.7373737 0.7516131 0.871051 0.7168918 0.8333333 0.8705448 0.7662330 0.8647358 0.8248923 0.8422181 0.8377997 0.764329 0.7120269 0.6516755 0.8292820 0.865873 0.7182540 0.8579752 0.7651015 0.8622244 0.8168433 0.4789466 0.5177102 0.63396241 0.39389422 0.493731 0.5825839 0.8492078 0.8748614 0.8074650 0.8642780 0.7971239 2 0.8034898 0.8511475 -0.04467293 6 0.795154 0.8315633 -0.0364091 0.90173436 0.00078305 weaklyHypometh 1.00000 0.42960 insignificant 8.9022e-01 0.06764006 insignificant 1.0000000 1.00000 insignificant -0.02202905 0.3401519 insignificant 1 insignificant 0.8034898 0.5577778 0.2648968 6 0.795154 0.487490 0.3076643 9.6194e-21 1.0000e+00 hypermethylated 8.0161e-19 1.0000e+00 hypermethylated 5.3869e-08 1.0000e+00 hypermethylated 3.5913e-06 1.0000e+00 hypermethylated 3.5187e-01 7.6380e-04 lowCoverage 2.6793e-02 lowCoverage 0.8034898 0.8557875 -0.0567568 6 0.7951541 0.8474152 -0.05226104 9.9799e-01 6.2803e-03 weaklyHypometh 1.0000e+00 3.1167e-01 insignificant 9.8478e-01 1.7944e-02 weaklyHypometh 1.0000e+00 6.1056e-01 insignificant -0.04689376 9.6446e-02 insignificant 1.000000 insignificant 0.8511475 0.5577778 3.0754e-01 6 0.8315633 0.487490 0.3440734 6.4457e-21 9.9999e-01 hypermethylated 6.4457e-19 1.0000e+00 hypermethylated 2.2496e-07 9.9997e-01 hypermethylated 2.4995e-05 1.0000e+00 hypermethylated 0.3738954 4.2208e-04 lowCoverage 1.8351e-02 lowCoverage 0.851148 0.8557875 -0.00613397 6 0.831563 0.8474152 -0.01585189 7.6425e-01 1.9928e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6307e-01 2.2201e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0248647 3.9017e-01 insignificant 1.0000000 insignificant 0.5577778 0.8557875 -0.30346978 6 0.487490 0.8474152 -0.3599253 1.0000e+00 3.0052e-11 hypomethylated 1.0000e+00 2.7320e-09 hypomethylated 1.0000e+00 6.1978e-06 hypomethylated 1.0000e+00 7.7472e-04 hypomethylated -0.3987601 2.6718e-04 lowCoverage 0.0267180 lowCoverage chr11 67100950 67101950 38964 CABP2 ENSG00000167791 0.918567 179 7 0.700497 282 7 0.8689166 167 7 0.8434932 164 5 0.9522409 94 7 0.9002229 318 7 0.7558357 120 7 0.9181830 255 7 0.8276288 145 7 0.7338383 121 6 0.8611215 274 7 0.711760 60 4 0.8609329 206 7 0.850790 141 7 0.8580993 182 7 0.7307692 48 4 1.0000000 3 0 0.9349121 181 5 0.8790717 257 7 0.859647 218 7 0.8198827 88 6 0.9212030 101 3 0.813931 184 7 0.754173 106 7 0.8142702 57 3 0.8241007 315 7 0.861778 182 7 0.522487 73 4 0.927980 163 7 0.7219172 303 7 0.8765660 208 7 0.9128209 234 7 0.5611522 225 7 0.5435808 141 5 0.6277233 157 7 0.7500000 18 1 0.654903 167 7 0.8055504 204 7 0.9071212 187 5 0.8320639 177 5 0.7729484 132 5 0.7197670 182 5 0.8766238 185 5 0.8903836 0.6174618 0.7782237 0.8842725 0.95440813 0.871380 0.7791939 0.8894226 0.7976056 0.8603807 0.8794203 0.8311915 0.8256552 0.907052 0.8687607 0.8522172 0.9409887 0.8891274 0.8593883 0.8608870 0.8679443 0.8777207 0.845057 0.8160612 0.9695366 0.8647736 0.857941 0.8532858 0.8922489 0.9173367 0.8580071 0.8914251 0.5201778 0.6071030 0.72561930 0.73507367 0.616957 0.7745084 0.8229731 0.8231042 0.8401318 0.8053285 0.8392630 4 0.8487691 0.8719360 -0.02384795 7 0.876850 0.8570277 0.0198228 0.92966732 0.07802951 insignificant 1.00000 1.00000 insignificant 9.6970e-01 0.08677912 insignificant 1.0000000 1.00000 insignificant 0.03406725 0.3727433 insignificant 1 insignificant 0.8486091 0.6147091 0.2315429 7 0.851480 0.564242 0.2872388 9.1452e-08 1.0000e+00 hypermethylated 1.6331e-06 1.0000e+00 hypermethylated 4.4269e-03 9.9995e-01 weaklyHypermeth 6.0643e-02 1.0000e+00 weaklyHypermeth 1.9117e-01 4.2791e-03 weaklyHypermeth 9.5092e-02 weaklyHypermeth 0.8487247 0.8292683 0.0060694 5 0.8592577 0.8244972 0.03476052 1.9299e-01 5.4647e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.2031e-01 5.8546e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02662155 5.1613e-01 insignificant 1.000000 insignificant 0.8711289 0.6153846 2.5383e-01 7 0.7988395 0.626935 0.1719043 9.2319e-08 9.9977e-01 hypermethylated 2.4295e-06 1.0000e+00 hypermethylated 1.0633e-03 9.9991e-01 weaklyHypermeth 1.9333e-02 1.0000e+00 weaklyHypermeth 0.1571075 1.3309e-02 weaklyHypermeth 2.1849e-01 insignificant 0.869825 0.8296640 0.03264075 5 0.826617 0.8634978 -0.03688058 4.7253e-02 8.6824e-01 weaklyHypermeth 8.5915e-01 1.0000e+00 insignificant 2.5843e-01 8.3523e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0074457 8.7677e-01 insignificant 1.0000000 insignificant 0.6156388 0.8292683 -0.23779445 5 0.663202 0.8244972 -0.1612949 9.9806e-01 3.8873e-03 weaklyHypometh 1.0000e+00 4.4681e-02 weaklyHypometh 9.9995e-01 1.8884e-02 weaklyHypometh 1.0000e+00 2.2216e-01 insignificant -0.1645532 1.4388e-02 weaklyHypometh 0.2786729 insignificant chr11 67350250 67351250 38968 ENSG00000171084 0.821243 142 6 0.629264 169 6 0.5480123 154 6 0.7929739 117 6 0.8352041 139 6 0.7549820 199 6 0.8383129 131 6 0.7941643 257 6 0.8415236 194 6 0.9583333 101 6 0.7918230 290 6 0.830792 130 6 0.6971032 185 6 0.628874 124 6 0.8187479 265 6 0.8176768 67 6 1.0000000 4 0 0.4234540 232 6 0.8809414 229 6 0.787777 192 6 0.5571429 46 3 0.4687500 50 4 0.887202 101 6 0.836167 122 6 0.7367424 51 6 0.8834061 181 6 0.780489 136 6 0.739683 83 6 0.796578 176 6 0.6546764 205 6 0.7074885 238 6 0.8439779 164 6 0.1510096 205 6 0.1244949 89 6 0.0560186 197 6 0.0000000 2 0 0.156194 196 6 0.1281267 259 6 0.5341972 139 6 0.6144307 74 6 0.6898148 66 6 0.4676932 141 6 0.3167600 116 6 0.8222907 0.6380111 0.5431471 0.7968437 0.84304435 0.843729 0.8923940 0.7930187 0.8174472 0.9566532 0.7949128 0.8303658 0.7628981 0.559334 0.8201214 0.7876446 NA 0.4951984 0.8624630 0.7908976 0.6534274 0.4659778 0.886655 0.8073105 0.7396706 0.8624036 0.781658 0.8584229 0.8017286 0.7686795 0.6624989 0.8145222 0.0346046 0.1192326 0.05355934 0.05960796 0.016105 0.1752232 0.5416756 0.6589862 0.6858199 0.4711241 0.3753202 6 0.7642276 0.7720541 -0.00699187 6 0.774571 0.7390113 0.0355599 0.81909054 0.59614615 insignificant 1.00000 1.00000 insignificant 8.1474e-01 0.81313781 insignificant 1.0000000 1.00000 insignificant 0.03353485 0.4894039 insignificant 1 insignificant 0.7642276 0.0802534 0.6853781 6 0.774571 0.219051 0.5555203 1.0885e-47 9.9979e-01 hypermethylated 5.4424e-45 1.0000e+00 hypermethylated 1.6317e-15 9.9994e-01 hypermethylated 8.1583e-13 1.0000e+00 hypermethylated 6.7192e-01 4.5711e-13 hypermethylated 1.5237e-10 hypermethylated 0.7647059 0.5149254 0.2499236 6 0.8088926 0.5135481 0.29534447 4.7859e-11 9.9993e-01 hypermethylated 1.5953e-08 1.0000e+00 hypermethylated 2.5665e-07 9.9998e-01 hypermethylated 6.4162e-05 1.0000e+00 hypermethylated 0.24998088 1.2639e-02 weaklyHypermeth 0.371740 insignificant 0.7720541 0.0802534 6.9148e-01 6 0.7390113 0.219051 0.5199605 2.5435e-38 1.0000e+00 hypermethylated 1.2718e-35 1.0000e+00 hypermethylated 1.7280e-10 1.0000e+00 hypermethylated 4.3199e-08 1.0000e+00 hypermethylated 0.6383846 1.7090e-10 hypermethylated 8.1722e-08 hypermethylated 0.772903 0.5149254 0.25873030 6 0.789721 0.5135481 0.27617293 2.9960e-10 1.0000e+00 hypermethylated 1.0615e-07 1.0000e+00 hypermethylated 5.5620e-06 1.0000e+00 hypermethylated 1.3905e-03 1.0000e+00 hypermethylated 0.2164460 2.2658e-02 weaklyHypermeth 0.9090584 insignificant 0.0793651 0.5149254 -0.43646330 6 0.183932 0.5135481 -0.3296159 1.0000e+00 4.0532e-15 hypomethylated 1.0000e+00 1.3511e-12 hypomethylated 1.0000e+00 4.5838e-08 hypomethylated 1.0000e+00 1.5279e-05 hypomethylated -0.4219386 1.4166e-03 weaklyHypometh 0.0674579 weaklyHypometh chr11 67669950 67670950 38975 CHKA ENSG00000110721 0.918882 289 5 0.902887 317 5 0.7757700 162 5 0.8699207 233 5 0.9507848 101 5 0.8075710 332 5 0.9060594 209 5 0.8788332 161 5 0.7878225 83 5 0.9747436 139 5 0.9172054 278 5 0.857749 85 5 0.9454212 88 5 0.935613 114 5 0.8920335 214 5 0.9388889 66 5 NA 0 0 0.8893880 428 5 0.8736902 355 5 0.906317 325 5 0.9428105 69 5 0.8333333 12 0 0.896276 213 6 0.937179 58 5 0.8928571 36 5 0.9043601 290 5 0.881987 132 5 0.745578 93 5 0.890374 313 5 0.9618006 278 5 0.9097488 299 5 0.9345544 321 5 0.3394158 273 5 0.3379358 310 5 0.6041667 35 3 NA 0 0 0.513591 192 6 0.4920149 418 5 0.8321820 374 5 0.8291967 245 6 0.8372036 161 5 0.9007198 486 5 0.6854235 181 5 0.9033699 0.8979136 0.8325330 0.8696444 0.93353781 0.826510 0.9058065 0.8748269 0.7797099 0.9710027 0.9183472 0.8587875 0.9532607 0.931755 0.8884907 0.9205240 NA 0.8680170 0.8687012 0.8917591 0.9459714 0.8593097 0.917758 0.9204232 0.8649407 0.9033687 0.864221 0.8206280 0.8934305 0.9623356 0.8974483 0.9338255 0.4211750 0.3204545 0.68830466 NA 0.470476 0.4936507 0.8927570 0.8615646 0.8008302 0.8870782 0.6702142 5 0.8871576 0.9072409 -0.02147366 5 0.887094 0.8688003 0.0182940 0.84539152 0.06791732 insignificant 1.00000 1.00000 insignificant 9.5361e-01 0.15911704 insignificant 1.0000000 1.00000 insignificant -0.00320765 0.8788031 lowCoverage 1 lowCoverage 0.8871576 0.4257749 0.4580201 5 0.887094 0.453575 0.4335193 8.2598e-36 1.0000e+00 hypermethylated 2.0040e-33 1.0000e+00 hypermethylated 4.4260e-10 1.0000e+00 hypermethylated 6.3228e-08 1.0000e+00 hypermethylated 4.3361e-01 7.7700e-04 lowCoverage 2.6793e-02 lowCoverage 0.8871576 0.8500346 0.0392456 5 0.8870943 0.8244417 0.06265256 1.6833e-03 7.4204e-01 weaklyHypermeth 5.8044e-02 1.0000e+00 weaklyHypermeth 6.9581e-03 9.9198e-01 weaklyHypermeth 2.3405e-01 1.0000e+00 insignificant 0.07408544 1.0519e-01 lowCoverage 1.000000 lowCoverage 0.9072409 0.4257749 4.7977e-01 5 0.8688003 0.453575 0.4152253 4.3733e-24 9.9999e-01 hypermethylated 7.2889e-22 1.0000e+00 hypermethylated 1.6555e-08 1.0000e+00 hypermethylated 2.3650e-06 1.0000e+00 hypermethylated 0.4368134 5.6995e-04 lowCoverage 2.2188e-02 lowCoverage 0.907241 0.8500346 0.05396059 5 0.868800 0.8244417 0.04435855 1.0213e-02 8.9907e-01 weaklyHypermeth 2.4154e-01 1.0000e+00 insignificant 4.3575e-03 9.9947e-01 weaklyHypermeth 2.0409e-01 1.0000e+00 insignificant 0.0772931 9.6965e-02 lowCoverage 1.0000000 lowCoverage 0.4257749 0.8500346 -0.41977049 5 0.453575 0.8244417 -0.3708668 9.9997e-01 4.9383e-11 hypomethylated 1.0000e+00 3.7987e-09 hypomethylated 1.0000e+00 1.1633e-04 hypomethylated 1.0000e+00 8.9482e-03 hypomethylated -0.3595203 7.0523e-04 lowCoverage 0.0371173 lowCoverage chr11 67780550 67781550 38978 ENSG00000210235 0.811293 349 8 0.641289 328 9 0.6888912 204 9 0.7538654 296 5 0.7203945 155 8 0.8124390 413 10 0.7344274 213 8 0.7811819 271 8 0.7156171 154 8 0.7710630 155 8 0.6613394 402 11 0.527976 64 3 0.8011488 209 7 0.591111 116 6 0.7179262 213 7 0.2061794 51 3 0.5066667 30 2 0.5318077 332 7 0.6482852 273 8 0.857012 219 8 0.5589366 154 8 0.6932494 125 8 0.694956 211 9 0.714476 131 6 0.6671607 353 10 0.7889722 433 11 0.595796 178 7 0.543384 65 4 0.669081 271 8 0.7298173 437 11 0.7192599 333 8 0.8199853 250 8 0.4611441 284 8 0.6123168 295 8 0.5891645 442 8 0.5602944 258 6 0.460329 213 9 0.5544825 315 9 0.7614110 290 7 0.6588730 296 8 0.7607605 336 8 0.6947077 271 7 0.7252179 264 7 0.7827876 0.6004165 0.6374862 0.7069268 0.69320225 0.765452 0.6610242 0.6694410 0.6718018 0.7366122 0.7211277 0.6274238 0.6653912 0.585226 0.6825121 0.4886115 0.7935289 0.6249690 0.7165873 0.7668502 0.6021103 0.6304651 0.773156 0.6569866 0.6066827 0.6943712 0.596501 0.7606946 0.6473360 0.6463186 0.6172258 0.7601964 0.4160843 0.4944206 0.58179634 0.50679141 0.421401 0.4064542 0.6474543 0.6184482 0.6440176 0.5733780 0.6140454 5 0.7246736 0.7068437 0.03129463 8 0.627085 0.6069569 0.0201279 0.07669790 0.93063328 insignificant 1.00000 1.00000 insignificant 2.9797e-01 0.99720216 insignificant 1.0000000 1.00000 insignificant -0.00892712 0.8299793 insignificant 1 insignificant 0.7246736 0.4676259 0.2287636 8 0.627085 0.464720 0.1623652 3.2775e-15 9.3672e-01 hypermethylated 1.5607e-13 1.0000e+00 hypermethylated 3.1909e-05 9.9288e-01 hypermethylated 1.0636e-03 1.0000e+00 hypermethylated 1.3437e-01 4.8489e-03 weaklyHypermeth 1.0541e-01 insignificant 0.7272315 0.6149623 0.0821873 7 0.7294248 0.7135173 0.01590751 2.6778e-03 6.2286e-02 weaklyHypermeth 8.6209e-02 1.0000e+00 weaklyHypermeth 2.2866e-02 2.3837e-01 weaklyHypermeth 6.3517e-01 1.0000e+00 insignificant -0.04619829 2.4555e-01 insignificant 1.000000 insignificant 0.7070845 0.4678848 1.7212e-01 8 0.6426603 0.492056 0.1506042 3.3955e-09 9.7452e-01 weaklyHypermeth 1.2127e-07 1.0000e+00 weaklyHypermeth 3.5214e-04 9.9012e-01 weaklyHypermeth 9.6185e-03 1.0000e+00 weaklyHypermeth 0.1433010 1.5397e-03 weaklyHypermeth 4.2751e-02 weaklyHypermeth 0.709247 0.6149623 0.03858423 7 0.706126 0.7135173 -0.00739124 2.5180e-01 7.4865e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 3.3368e-01 3.2827e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0372712 2.5332e-01 insignificant 1.0000000 insignificant 0.4677778 0.6149623 -0.20499045 7 0.517664 0.7135173 -0.1958538 9.9999e-01 8.1023e-05 hypomethylated 1.0000e+00 1.7614e-03 hypomethylated 9.9953e-01 1.7041e-03 weaklyHypometh 1.0000e+00 4.3695e-02 weaklyHypometh -0.1805721 4.2872e-04 weaklyHypometh 0.0329784 weaklyHypometh chr11 67878050 67879050 38981 LRP5 ENSG00000162337 0.861111 38 4 0.728049 79 6 0.7714286 55 5 0.8385417 36 4 0.8981481 27 2 0.9264137 70 4 0.9500000 21 1 0.8416667 31 3 0.8133333 24 2 0.9375000 24 1 0.9121212 79 6 0.700000 15 2 0.6866667 36 2 NA 0 0 0.6153846 30 2 0.7960526 31 2 0.7070707 20 2 0.7761905 24 2 0.9273990 58 2 0.944444 23 2 0.6363636 36 4 0.9333333 11 2 0.743563 56 6 0.889860 26 2 0.7136364 65 4 0.7251401 83 8 0.909722 32 3 0.500000 13 1 0.895833 30 3 0.7950588 108 8 0.9112216 55 5 0.9546703 50 4 0.2288462 104 8 0.5159184 70 6 0.1498480 121 5 0.4000000 82 4 0.531540 40 6 0.3096154 79 8 0.7500000 14 0 0.7187500 36 3 0.9761905 30 4 NA 0 0 0.7000000 23 2 1.0000000 0.5000000 0.6000000 0.7500000 0.83333333 0.750000 0.8000000 0.5000000 0.3333333 1.0000000 0.7727273 0.6000000 0.5600000 NA 0.6153846 0.8421053 0.6363636 1.0000000 0.7727273 1.0000000 0.9090909 1.0000000 0.500000 0.6363636 NA 0.6428571 1.000000 1.0000000 0.3750000 0.4000000 0.5625000 1.0000000 0.0000000 0.0400000 0.00000000 0.00000000 0.363636 0.0000000 0.5000000 0.7500000 NA NA NA 0 0.8058252 0.8288770 0.01408672 2 0.807969 0.7442737 0.0636954 0.46081028 0.84626943 lowCoverage 1.00000 1.00000 lowCoverage 6.5697e-01 0.73441027 lowCoverage 1.0000000 1.00000 lowCoverage 0.02201147 0.6431952 lowCoverage 1 lowCoverage 0.8058252 0.2681452 0.4529876 2 0.807969 0.366125 0.4418439 6.5291e-32 9.7719e-01 lowCoverage 9.3273e-30 1.0000e+00 lowCoverage 8.2446e-09 9.8496e-01 lowCoverage 6.3420e-07 1.0000e+00 lowCoverage 4.6675e-01 3.2559e-04 lowCoverage 1.3566e-02 lowCoverage 0.8046310 0.9126214 -0.0219136 0 0.8047986 0.7390476 0.06575103 3.7500e-01 2.8888e-01 noCoverage 1.0000e+00 1.0000e+00 noCoverage 5.4323e-01 6.2102e-01 noCoverage 1.0000e+00 1.0000e+00 noCoverage 0.03647655 6.2257e-01 lowCoverage 1.000000 lowCoverage 0.8288770 0.2681452 4.3544e-01 5 0.7442737 0.366125 0.3781485 8.7948e-24 8.5565e-01 hypermethylated 1.2564e-21 1.0000e+00 hypermethylated 1.3350e-07 9.1419e-01 hypermethylated 1.6688e-05 1.0000e+00 hypermethylated 0.4447389 1.9515e-04 lowCoverage 9.2926e-03 lowCoverage 0.829175 0.9126214 -0.03814818 2 0.734183 0.7390476 -0.00486467 7.7669e-01 2.8673e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.9980e-01 4.2062e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0144651 8.5548e-01 lowCoverage 1.0000000 lowCoverage 0.2929515 0.9126214 -0.39778323 2 0.411891 0.7390476 -0.3271567 8.4053e-01 1.4091e-14 lowCoverage 1.0000e+00 2.8181e-12 lowCoverage 8.6778e-01 1.2684e-03 lowCoverage 1.0000e+00 3.4281e-02 lowCoverage -0.4302738 1.6966e-03 lowCoverage 0.0706930 lowCoverage chr11 67960950 67961950 38983 LRP5 ENSG00000162337 0.947611 296 6 0.865136 181 6 0.8430829 185 6 0.9439314 339 6 0.8840454 140 6 0.9164066 322 6 0.9519231 121 6 0.9264865 164 6 0.9174797 157 6 0.9379071 228 6 0.8888034 186 6 0.899123 98 6 0.9109521 256 6 0.874609 146 6 0.9423915 249 6 0.8571429 60 3 1.0000000 12 0 0.8652244 393 6 0.8933861 183 6 0.936181 259 6 0.8422619 37 6 0.8888889 95 6 0.936828 116 6 0.927473 37 3 0.9555556 60 6 0.8040449 236 6 0.802721 72 5 0.656128 118 6 0.907246 236 6 0.8675188 303 6 0.9304890 243 6 0.9235010 278 6 0.8304686 120 6 0.7165638 102 6 1.0000000 107 3 0.7500000 48 3 0.865075 135 6 0.9659383 255 6 0.9295154 268 6 0.8847747 274 6 0.9335924 217 6 0.9158485 264 6 0.9362901 312 6 0.9334035 0.8691183 0.8383081 0.9367594 0.87098205 0.918119 0.9476948 0.9179265 0.9133245 0.9361419 0.8956385 0.9083670 0.9155427 0.876411 0.9423163 1.0000000 1.0000000 0.8559873 0.8963886 0.9304972 0.8145672 0.8924466 0.926642 0.8958696 0.9461412 0.9362155 0.928689 0.8943515 0.9105961 0.8914392 0.9357090 0.9219861 0.8136922 0.9038497 0.87061991 0.70935961 0.846673 0.9629700 0.9293090 0.9515158 0.9278555 0.9052996 0.9303280 5 0.9084046 0.9213421 -0.01654784 6 0.926006 0.9349473 -0.0089416 0.95551553 0.27002420 insignificant 1.00000 1.00000 insignificant 9.0075e-01 0.46734694 insignificant 1.0000000 1.00000 insignificant 0.03986976 0.1470082 insignificant 1 insignificant 0.9084046 0.8980392 0.0103628 6 0.926006 0.787491 0.1385146 3.4171e-01 6.8887e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 1.4035e-01 3.7216e-01 insignificant 9.4196e-01 1.0000e+00 insignificant 5.5417e-02 2.8888e-01 insignificant 1.0000e+00 insignificant 0.9081530 0.9278738 -0.0144610 6 0.7831486 0.9428157 -0.15966710 9.8984e-01 1.6129e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.6961e-01 2.7902e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00991314 4.5817e-01 insignificant 1.000000 insignificant 0.9199561 0.8970013 3.3241e-02 6 0.8827368 0.723604 0.1591326 6.5026e-01 1.4606e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.5197e-01 7.0269e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0155471 7.7402e-01 insignificant 1.0000e+00 insignificant 0.916348 0.9272864 0.00396287 6 0.694463 0.8599710 -0.16550788 9.8178e-01 5.6268e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7730e-01 9.0030e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0497829 7.8669e-02 insignificant 1.0000000 insignificant 0.8981723 0.9279279 -0.02624087 6 0.814055 0.9499637 -0.1359090 6.0500e-01 8.2919e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.1275e-01 5.2342e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0653300 2.2090e-01 insignificant 1.0000000 insignificant chr11 68031550 68032550 38986 ENSG00000212093 0.737374 101 4 0.741024 82 6 0.5690476 54 6 0.5927609 116 8 0.4846726 42 5 0.6670093 204 7 0.5349478 43 4 0.7570028 60 6 0.6645833 30 2 0.9818182 21 2 0.7523962 159 7 0.785714 9 0 0.8501984 55 2 0.730000 24 3 0.6641975 39 3 0.7000000 11 1 1.0000000 4 0 0.8140196 112 6 0.6390873 67 5 0.778496 174 6 0.7236111 35 3 0.6011364 35 2 0.625983 59 3 0.747812 54 3 0.7222222 25 2 0.5753262 111 7 0.728455 72 3 0.505455 25 2 0.609722 69 5 0.7915816 61 4 0.7984920 104 7 0.7686187 210 7 0.6049679 54 3 0.4645833 38 5 0.5666667 60 4 1.0000000 5 0 0.570015 81 3 0.6147684 104 7 0.7739549 201 7 0.8374183 119 7 0.7667922 122 7 0.7968750 41 4 0.7325659 114 7 0.9331294 0.7015542 0.5256410 0.8801823 0.75686813 0.866380 0.7225510 0.8673643 0.9083333 0.9458042 0.8476121 0.3557692 0.8464591 0.829327 0.8720085 0.8633155 0.9181505 0.8533309 0.7670940 0.8694310 0.7190171 0.9150350 0.733930 0.8176923 0.6955128 0.7021062 0.913115 0.7758741 0.8048077 0.7123970 0.8063507 0.8887530 0.5631164 0.9230769 0.85833333 1.00000000 0.814286 0.8612878 0.8476533 0.9240825 0.9388430 1.0000000 0.8567119 1 0.7775409 0.7720930 0.00909200 3 0.673308 0.6407092 0.0325986 0.29897118 0.73471485 lowCoverage 1.00000 1.00000 lowCoverage 1.0751e-01 0.88819970 lowCoverage 1.0000000 1.00000 lowCoverage 0.03901615 0.3410233 lowCoverage 1 lowCoverage 0.7775409 0.7368421 0.0454574 3 0.673308 0.539215 0.1340927 2.1036e-03 9.5484e-01 lowCoverage 1.7677e-02 1.0000e+00 lowCoverage 1.1774e-02 6.3648e-01 lowCoverage 1.2766e-01 1.0000e+00 lowCoverage 8.5384e-02 3.3074e-01 lowCoverage 1.0000e+00 lowCoverage 0.7775409 0.8073702 -0.0530533 3 0.6733078 0.7766702 -0.10336239 9.6395e-01 5.9269e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.3871e-01 2.3429e-02 lowCoverage 1.0000e+00 7.5578e-01 lowCoverage -0.05930377 9.6373e-02 lowCoverage 1.000000 lowCoverage 0.7720930 0.7368421 3.7670e-02 3 0.6407092 0.539215 0.1014941 4.2929e-02 9.4338e-01 lowCoverage 2.9404e-01 1.0000e+00 lowCoverage 2.4065e-01 7.2939e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0463678 5.8521e-01 lowCoverage 1.0000e+00 lowCoverage 0.772093 0.8073702 -0.06235331 6 0.640709 0.7766702 -0.13596101 9.9888e-01 1.3377e-02 weaklyHypometh 1.0000e+00 6.3698e-01 insignificant 9.9960e-01 5.9550e-03 weaklyHypometh 1.0000e+00 6.7530e-01 insignificant -0.0983199 8.6736e-03 lowCoverage 0.5108832 lowCoverage 0.7368421 0.8073702 -0.09769543 3 0.539215 0.7766702 -0.2374551 9.9927e-01 9.3039e-03 lowCoverage 1.0000e+00 8.5357e-02 lowCoverage 9.9871e-01 1.2650e-02 lowCoverage 1.0000e+00 1.6645e-01 lowCoverage -0.1446877 1.1645e-01 lowCoverage 1.0000000 lowCoverage chr11 68403050 68404050 38990 CPT1A ENSG00000110090 0.578704 93 5 0.661832 123 5 0.5454545 53 5 0.6886311 93 5 0.5651404 64 5 0.7738462 89 5 0.3846154 36 2 0.7150000 66 5 0.7103175 43 5 0.9000000 10 0 0.5166126 144 5 0.750000 4 0 0.7900000 48 5 0.900000 35 5 0.6111111 24 3 0.5000000 16 0 0.2500000 4 0 0.5876266 106 6 0.6683333 63 2 0.705000 56 5 0.7666667 26 5 0.7777778 9 0 0.790741 32 2 0.666667 35 5 0.6952381 51 2 0.7287785 96 5 0.627273 43 3 0.666667 29 2 0.646363 63 5 0.8290043 102 5 0.6907680 86 5 0.6649958 79 5 0.5620985 73 5 0.5285714 61 5 0.5578231 80 5 0.8000000 15 0 0.698038 48 5 0.7160053 70 5 0.5539591 88 5 0.7219298 74 5 0.7303030 80 5 0.7065359 42 2 0.7522711 79 5 0.5878109 0.6949978 0.6491180 0.6827072 0.59034498 0.818102 0.4508228 0.7088308 0.7578773 0.8880597 0.7250048 0.6875393 0.7828358 0.900000 0.7412935 0.4079602 0.4935095 0.5630422 0.7807463 0.7070896 0.6985075 0.7584409 0.745771 0.6567164 0.7000711 0.8144062 0.607644 0.7147595 0.7077722 0.7920140 0.6908472 0.6614796 0.5817961 0.6383795 0.58351102 0.77611940 0.722831 0.6480336 0.6547778 0.7149123 0.7256897 0.7046630 0.7454349 0 0.7025641 0.7173579 -0.01560894 5 0.624709 0.6916547 -0.0669455 0.70516302 0.05676726 insignificant 1.00000 1.00000 insignificant 9.4814e-01 0.06455301 insignificant 1.0000000 1.00000 insignificant -0.07246704 0.0821387 lowCoverage 1 lowCoverage 0.7025641 0.6397695 0.0638221 5 0.624709 0.621275 0.0034338 7.9662e-02 9.3078e-01 insignificant 5.0102e-01 1.0000e+00 insignificant 6.1163e-01 7.6179e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -3.6448e-03 9.5015e-01 lowCoverage 1.0000e+00 lowCoverage 0.7042132 0.7190083 -0.0083973 5 0.6573988 0.6024054 0.05499333 4.5709e-01 5.0981e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.1801e-01 5.0254e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.05288860 3.1155e-01 lowCoverage 1.000000 lowCoverage 0.7173579 0.6397695 8.0831e-02 5 0.6916547 0.621275 0.0703793 8.5694e-03 9.9167e-01 weaklyHypermeth 7.2012e-02 1.0000e+00 weaklyHypermeth 1.2062e-01 9.8617e-01 insignificant 8.4352e-01 1.0000e+00 insignificant 0.0688222 1.9945e-01 lowCoverage 1.0000e+00 lowCoverage 0.714286 0.7190083 -0.00317161 5 0.640264 0.6024054 0.03785837 6.3811e-01 6.1552e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.7387e-01 8.7746e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0195784 6.4217e-01 lowCoverage 1.0000000 lowCoverage 0.6384840 0.7190083 -0.07663867 5 0.599821 0.6024054 -0.0025842 9.5645e-01 3.2954e-02 weaklyHypometh 1.0000e+00 2.4965e-01 insignificant 9.5756e-01 3.1292e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0492438 4.1107e-01 lowCoverage 1.0000000 lowCoverage chr11 68470150 68471150 38991 IGHMBP2 ENSG00000132740 0.758437 228 7 0.668117 277 7 0.6861626 192 7 0.9209151 235 7 0.9189048 141 7 0.8591210 417 7 0.7888382 217 7 0.7532518 336 7 0.6784124 193 7 0.6974780 138 7 0.8527625 467 7 0.807813 70 7 0.9479167 158 7 0.735237 136 7 0.7534648 176 7 0.6125000 33 2 1.0000000 1 0 0.8201073 305 7 0.7891397 567 7 0.881364 333 7 0.7268236 133 7 0.8789841 78 6 0.774761 222 7 0.695568 123 7 0.7823129 67 6 0.9296806 421 7 0.807873 262 7 0.696339 111 7 0.880476 415 7 0.8810564 414 7 0.9129332 418 7 0.8761592 344 7 0.6062514 326 7 0.4539140 323 7 0.3999351 185 4 0.9333333 9 0 0.482922 296 7 0.8983166 446 7 0.6473940 286 7 0.8924871 269 7 0.7998463 167 7 0.8655123 161 7 0.7504922 191 7 0.8606028 0.7526998 0.7012684 0.8865129 0.86900186 0.842225 0.7902243 0.8528080 0.8600680 0.8768168 0.8521166 0.9103604 0.9251652 0.808236 0.8604507 0.8106010 NA 0.7643865 0.8942790 0.8574907 0.8580430 0.8710509 0.885944 0.7675071 0.7768054 0.8949496 0.794999 0.7858273 0.8617121 0.8676547 0.8941968 0.8801973 0.6249975 0.4988426 0.43984383 0.88346853 0.579753 0.9025500 0.9212453 0.8346795 0.7828494 0.8542508 0.7655375 7 0.8372294 0.8636968 -0.02453240 7 0.736907 0.7875273 -0.0506202 0.99728602 0.05251038 insignificant 1.00000 1.00000 insignificant 9.8107e-01 0.53652056 insignificant 1.0000000 1.00000 insignificant -0.02375021 0.4856300 insignificant 1 insignificant 0.8372294 0.6334385 0.1914755 7 0.736907 0.516741 0.2201659 4.5360e-11 6.1138e-01 weaklyHypermeth 1.2883e-09 1.0000e+00 weaklyHypermeth 3.3502e-02 7.4138e-01 weaklyHypermeth 2.7918e-01 1.0000e+00 insignificant 1.6738e-01 1.4090e-01 insignificant 1.0000e+00 insignificant 0.8372294 0.8491620 -0.0093807 7 0.7369072 0.7045213 0.03238584 7.9322e-01 6.3611e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.3671e-01 9.6816e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00535077 9.1718e-01 insignificant 1.000000 insignificant 0.8636968 0.6334385 2.3201e-01 7 0.7875273 0.516741 0.2707861 6.8909e-07 9.9275e-01 hypermethylated 1.4356e-05 1.0000e+00 hypermethylated 4.9717e-02 9.7454e-01 weaklyHypermeth 4.1779e-01 1.0000e+00 insignificant 0.1911352 1.0171e-01 insignificant 9.4715e-01 insignificant 0.863697 0.8491620 0.01446114 7 0.787527 0.7045213 0.08300602 6.2032e-01 9.9791e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.3772e-01 9.9587e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0291010 5.7973e-01 insignificant 1.0000000 insignificant 0.6334385 0.8491620 -0.19214389 7 0.516741 0.7045213 -0.1877801 8.6499e-01 2.9509e-02 weaklyHypometh 1.0000e+00 2.3607e-01 insignificant 8.5227e-01 6.3313e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.1620342 1.6511e-01 insignificant 1.0000000 insignificant chr11 68604050 68605050 38995 TPCN2 ENSG00000162341 0.767687 151 4 0.717632 152 6 0.7635996 115 4 0.9321267 119 4 0.8280229 131 6 0.9515998 272 6 0.7895022 142 6 0.8864799 121 4 0.8266206 109 6 0.8500482 119 6 0.8328966 254 6 0.925926 64 2 0.9686824 102 4 0.795322 55 4 0.7537560 129 4 0.5657626 94 4 0.8424908 47 2 0.6146162 169 5 0.9083935 210 6 0.774008 222 6 0.7318849 132 6 0.6333333 17 2 0.791881 162 6 0.765432 66 4 0.8697723 100 3 0.9030053 172 6 0.628547 111 6 0.700000 48 3 0.826435 162 6 0.9173631 158 6 0.8142644 190 6 0.9454923 228 6 0.3968631 164 6 0.5008615 205 6 0.2903152 112 3 0.3333333 75 3 0.473280 95 7 0.3725723 267 6 0.7629503 146 6 0.9326577 154 4 0.7625483 86 4 0.9421262 118 4 0.9257267 142 6 0.9116253 0.8371163 0.7903182 0.8985831 0.88277870 0.897781 0.8963198 0.8788062 0.8511090 0.9197079 0.8834953 0.8163798 0.9078619 0.821926 0.8823278 0.7785942 0.8368950 0.6095298 0.9233695 0.8859162 0.8279714 0.4638498 0.894598 0.9054078 0.7731944 0.9071410 0.834987 0.9605634 0.8580442 0.8879524 0.9316835 0.9290702 0.4319099 0.3867628 0.46291382 0.05633803 0.779980 0.1921018 0.9382141 0.8816965 0.9090217 0.9001337 0.8796750 2 0.8618326 0.8790427 -0.01956055 6 0.702083 0.7736865 -0.0716036 0.92274427 0.23166911 insignificant 1.00000 1.00000 insignificant 8.0421e-01 0.45511214 insignificant 1.0000000 1.00000 insignificant 0.02080766 0.5945379 lowCoverage 1 lowCoverage 0.8627663 0.3355120 0.5277072 6 0.729861 0.285892 0.4439684 1.1554e-27 1.0000e+00 hypermethylated 1.4442e-25 1.0000e+00 hypermethylated 3.1527e-09 1.0000e+00 hypermethylated 3.5030e-07 1.0000e+00 hypermethylated 4.2022e-01 6.8861e-07 lowCoverage 7.6512e-05 lowCoverage 0.8629790 0.9071207 -0.0434452 4 0.7955352 0.8093467 -0.01381155 7.1918e-01 2.3235e-02 lowCoverage 1.0000e+00 5.8087e-01 lowCoverage 9.2791e-01 4.0724e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.05044316 3.2943e-01 lowCoverage 1.000000 lowCoverage 0.8805970 0.3362445 5.3692e-01 6 0.8161684 0.367576 0.4485926 4.5182e-21 1.0000e+00 hypermethylated 5.0202e-19 1.0000e+00 hypermethylated 1.1481e-06 9.9999e-01 hypermethylated 8.6646e-05 1.0000e+00 hypermethylated 0.3994134 7.1756e-07 hypermethylated 1.1844e-04 hypermethylated 0.880597 0.9071207 -0.02120166 4 0.816168 0.8093467 0.00682168 7.8253e-01 2.6647e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.5023e-01 1.4159e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0712508 2.0492e-01 lowCoverage 1.0000000 lowCoverage 0.3362445 0.9071207 -0.59162813 4 0.367576 0.8093467 -0.4417710 9.9972e-01 7.9901e-13 lowCoverage 1.0000e+00 8.8779e-11 lowCoverage 1.0000e+00 3.1898e-06 lowCoverage 1.0000e+00 4.5568e-04 lowCoverage -0.4706642 2.0964e-05 lowCoverage 0.0041928 lowCoverage chr11 68639150 68640150 38996 TPCN2 ENSG00000162341 0.800000 13 0 0.853269 99 5 0.8664444 90 5 1.0000000 7 0 0.8387271 113 5 0.8350000 36 4 0.8509852 110 5 0.7144522 80 5 0.8370879 65 5 0.9418182 76 5 0.9128205 147 5 0.878571 72 5 0.8639471 97 5 NA 0 0 0.9360644 121 5 0.9469294 102 5 0.9348546 73 5 0.8666667 21 2 0.9923077 97 5 1.000000 18 1 0.9184211 76 4 NA 0 0 0.855702 66 5 0.904762 24 3 1.0000000 3 0 0.8876768 60 5 1.000000 38 5 0.945455 51 4 0.900117 70 5 0.9214286 79 5 0.9825758 86 5 0.9633333 38 3 0.8114815 107 5 0.8083333 107 5 0.7045455 95 4 1.0000000 3 0 0.873214 54 5 0.8914286 40 5 1.0000000 9 0 1.0000000 23 2 1.0000000 3 0 0.9333333 10 0 0.9166667 6 0 0.8627451 0.8753959 0.8781046 1.0000000 0.87057389 0.804412 0.8572279 0.7440697 0.8638494 0.9614973 0.9384615 0.8998599 0.8923592 NA 0.9353889 0.9219550 0.9222975 0.8823529 0.9886878 1.0000000 0.9388545 NA 0.895640 0.9383754 0.9878748 0.8989899 1.000000 0.9625668 0.9054008 0.9651261 0.9743761 0.9460784 0.8273420 0.8651961 0.72237077 0.97495331 0.872374 0.8739496 1.0000000 1.0000000 0.9950980 0.9019608 0.9803922 0 0.8872651 0.9255499 -0.03883588 5 0.885295 0.9223834 -0.0370889 0.99667147 0.01403946 weaklyHypometh 1.00000 0.94258 insignificant 9.9786e-01 0.01515637 weaklyHypometh 1.0000000 1.00000 insignificant -0.04660543 0.0447738 lowCoverage 1 lowCoverage 0.8872651 0.8004926 0.0843618 5 0.885295 0.792227 0.0930671 1.3810e-05 7.4956e-01 weaklyHypermeth 1.8171e-04 1.0000e+00 weaklyHypermeth 2.6993e-01 6.8494e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.9725e-02 3.9566e-01 lowCoverage 1.0000e+00 lowCoverage 0.8872651 0.9607843 -0.0756207 0 0.8852945 0.9646154 -0.07932085 9.9960e-01 1.7797e-04 noCoverage 1.0000e+00 2.5238e-02 noCoverage 1.0000e+00 1.8973e-04 noCoverage 1.0000e+00 2.7104e-02 noCoverage -0.08210810 6.9515e-03 lowCoverage 0.224241 lowCoverage 0.9255499 0.8004926 1.2533e-01 5 0.9223834 0.792227 0.1301560 9.2882e-06 9.1451e-01 weaklyHypermeth 1.4290e-04 1.0000e+00 weaklyHypermeth 1.1331e-02 9.7785e-01 weaklyHypermeth 1.2590e-01 1.0000e+00 insignificant 0.0863301 8.8882e-02 lowCoverage 8.8002e-01 lowCoverage 0.925550 0.9607843 -0.03571522 0 0.922383 0.9646154 -0.04223198 9.4780e-01 2.7969e-02 noCoverage 1.0000e+00 1.0000e+00 noCoverage 9.9899e-01 1.7509e-02 noCoverage 1.0000e+00 1.0000e+00 noCoverage -0.0355027 1.6495e-01 lowCoverage 1.0000000 lowCoverage 0.8004926 0.9607843 -0.17184035 0 0.792227 0.9646154 -0.1723880 9.9998e-01 1.7414e-05 noCoverage 1.0000e+00 4.8371e-04 noCoverage 1.0000e+00 1.0445e-03 noCoverage 1.0000e+00 3.0655e-02 noCoverage -0.1218328 2.9286e-02 lowCoverage 0.4011756 lowCoverage chr11 68646450 68647450 38997 TPCN2 ENSG00000162341 0.138676 523 10 0.136739 534 10 0.0786976 395 10 0.1315981 444 10 0.1316581 270 9 0.1861808 729 10 0.1794019 490 10 0.1376853 432 10 0.1044554 458 10 0.1177554 302 10 0.1928595 478 10 0.142163 249 10 0.0604142 353 10 0.165496 152 6 0.1237842 490 10 0.2674465 248 8 0.0878440 212 6 0.1720337 573 10 0.0507253 485 10 0.083506 635 10 0.1708375 163 9 0.2217116 183 8 0.159870 463 10 0.245855 180 7 0.3575528 155 7 0.1066386 646 10 0.107226 332 10 0.104921 259 10 0.192713 469 10 0.1126101 760 10 0.0844492 653 10 0.1224160 625 10 0.2894628 404 10 0.1649206 350 7 0.1267857 264 8 0.2922336 83 6 0.323171 325 10 0.3624695 560 10 0.2550584 785 8 0.3999616 531 8 0.1774154 474 8 0.0887192 646 8 0.3232550 536 8 0.0826552 0.1117592 0.0417463 0.0894468 0.04579322 0.109474 0.0298131 0.0512021 0.0498327 0.0616201 0.1162903 0.0805002 0.0232301 0.067061 0.0488708 0.1075613 0.1031155 0.1140133 0.0319098 0.0601352 0.1203961 0.0947927 0.127750 0.1157253 0.1548004 0.0442040 0.081954 0.0479663 0.0773305 0.0495282 0.0231984 0.0902511 0.1722650 0.1338843 0.09760434 0.29896801 0.195305 0.2516011 0.1931413 0.2531309 0.1564131 0.1193566 0.2075130 8 0.0905218 0.0943126 0.00067271 10 0.179693 0.2099507 -0.0302577 0.49253353 0.95508446 insignificant 1.00000 1.00000 insignificant 7.3566e-01 0.67227221 insignificant 1.0000000 1.00000 insignificant -0.03111079 0.2409795 insignificant 1 insignificant 0.0905325 0.2311178 -0.1314249 10 0.194667 0.275509 -0.0808419 9.9900e-01 3.3646e-18 weaklyHypometh 1.0000e+00 1.6823e-15 weaklyHypometh 9.9637e-01 4.2776e-04 weaklyHypometh 1.0000e+00 1.0694e-01 insignificant -1.2538e-01 1.9737e-02 weaklyHypometh 3.1329e-01 insignificant 0.0904249 0.1480485 -0.1082819 8 0.1214554 0.2532836 -0.13182819 1.0000e+00 1.6854e-24 weaklyHypometh 1.0000e+00 8.4268e-22 weaklyHypometh 1.0000e+00 3.2486e-10 weaklyHypometh 1.0000e+00 1.6243e-07 weaklyHypometh -0.11442591 1.0280e-01 insignificant 1.000000 insignificant 0.0941273 0.2311178 -1.3076e-01 10 0.1441133 0.275509 -0.1313961 9.9667e-01 9.8108e-14 weaklyHypometh 1.0000e+00 4.9054e-11 weaklyHypometh 9.9867e-01 1.4481e-03 weaklyHypometh 1.0000e+00 3.6203e-01 insignificant -0.0942738 6.3018e-02 insignificant 7.0806e-01 insignificant 0.093814 0.1480485 -0.11114303 8 0.120851 0.2532836 -0.13243278 1.0000e+00 1.8735e-15 weaklyHypometh 1.0000e+00 9.3674e-13 weaklyHypometh 1.0000e+00 1.0089e-07 weaklyHypometh 1.0000e+00 5.0443e-05 weaklyHypometh -0.0833151 2.1211e-01 insignificant 1.0000000 insignificant 0.2312343 0.1480485 -0.00056182 8 0.300556 0.2532836 0.0472720 1.4533e-01 1.6529e-03 weaklyHypometh 1.0000e+00 2.2491e-02 weaklyHypometh 6.8807e-01 2.6568e-02 weaklyHypometh 1.0000e+00 2.7788e-01 insignificant 0.0109586 8.7314e-01 insignificant 1.0000000 insignificant chr11 68655050 68656050 38998 TPCN2 ENSG00000162341 0.909739 169 5 0.778135 144 5 0.8908741 186 5 0.9108803 225 5 0.8971429 93 4 0.9100847 301 5 0.9155814 106 5 0.9068461 158 5 0.8275851 113 5 0.8883823 124 5 0.8465372 183 5 0.831579 67 3 0.8942599 146 5 0.939764 78 3 0.9221847 180 5 0.7230303 47 4 0.7309524 37 2 0.7420049 186 5 0.8881482 178 5 0.936764 171 5 0.7767145 58 5 0.8571170 122 5 0.866800 171 5 0.935150 91 5 0.8657828 70 4 0.9168173 215 5 0.737562 159 5 0.934524 62 5 0.926211 161 5 0.9111118 269 5 0.9410502 231 5 0.9305929 255 5 0.6246035 192 5 0.7277155 94 5 0.9770115 176 3 0.9318182 41 3 0.730602 171 5 0.9019089 218 5 0.9336694 218 5 0.9336996 221 5 0.9178962 215 5 0.9183193 199 5 0.9382878 255 5 0.8847912 0.7788802 0.8486625 0.8994839 0.83097143 0.897381 0.8199488 0.8795248 0.7792827 0.8735157 0.8555309 0.7832632 0.8391196 0.915148 0.8844707 0.6939636 0.6739771 0.8711304 0.8406203 0.9087883 0.8925550 0.8526398 0.848686 0.8889323 0.9001540 0.9107850 0.860337 0.8674286 0.9052749 0.8664710 0.9100466 0.9077752 0.7313546 0.6136681 0.91683711 0.93806819 0.773002 0.8366642 0.9416157 0.9253242 0.9069322 0.9245105 0.9191166 4 0.8571923 0.8888292 -0.02811825 5 0.823072 0.8383213 -0.0152498 0.85062016 0.07241456 insignificant 1.00000 1.00000 insignificant 8.9790e-01 0.07974015 insignificant 1.0000000 1.00000 insignificant -0.01876235 0.4543531 lowCoverage 1 lowCoverage 0.8574394 0.7896513 0.0701787 5 0.887686 0.796879 0.0908073 2.6733e-04 9.9842e-01 weaklyHypermeth 2.5954e-03 1.0000e+00 weaklyHypermeth 1.6212e-01 7.3231e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.8914e-02 4.4268e-01 lowCoverage 1.0000e+00 lowCoverage 0.8574394 0.9133574 -0.0662275 5 0.8876859 0.9297112 -0.04202533 9.8552e-01 5.8932e-03 weaklyHypometh 1.0000e+00 3.1017e-01 insignificant 9.8336e-01 2.6805e-04 weaklyHypometh 1.0000e+00 3.3506e-02 weaklyHypometh -0.06385071 6.9067e-04 lowCoverage 0.046044 lowCoverage 0.8897849 0.7892377 9.6999e-02 5 0.9328468 0.783485 0.1493621 3.4509e-03 1.0000e+00 weaklyHypermeth 3.1089e-02 1.0000e+00 weaklyHypermeth 3.8836e-01 9.9220e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0676762 3.0440e-01 lowCoverage 1.0000e+00 lowCoverage 0.889666 0.9133574 -0.03425855 5 0.905986 0.9297112 -0.02372563 8.4678e-01 8.3935e-03 weaklyHypometh 1.0000e+00 4.1968e-01 insignificant 7.1925e-01 4.2479e-03 weaklyHypometh 1.0000e+00 6.7530e-01 insignificant -0.0450884 4.0414e-02 lowCoverage 1.0000000 lowCoverage 0.7896513 0.9133574 -0.12869148 5 0.796879 0.9297112 -0.1328326 9.9957e-01 2.9320e-03 weaklyHypometh 1.0000e+00 3.5325e-02 weaklyHypometh 9.9262e-01 2.1447e-02 weaklyHypometh 1.0000e+00 2.4098e-01 insignificant -0.1127646 1.0623e-01 lowCoverage 0.9776823 lowCoverage chr11 68917450 68918450 39012 MYEOV ENSG00000172927 0.9045572 300 10 0.811510 298 8 0.7460765 261 11 0.9313718 287 9 0.860354 113 7 0.895400 395 10 0.759932 135 7 0.925747 315 10 0.9066157 212 10 0.8544326 265 8 0.878129 362 12 0.721861 59 5 0.9085904 414 9 0.601843 139 6 0.906228 208 10 0.660000 77 7 0.5269841 28 2 0.853146 342 8 0.906701 291 11 0.907126 309 10 0.727516 179 10 0.806002 187 11 0.8010102 191 10 0.8450442 123 9 0.7877814 134 9 0.8055940 401 11 0.772760 249 10 0.815784 139 9 0.897974 355 10 0.873504 452 12 0.898169 348 12 0.9115215 384 12 0.8409654 305 11 0.8405923 247 10 0.820513 98 6 0.7063665 88 7 0.669796 195 10 0.950820 457 12 0.835801 233 10 0.910113 269 8 0.820961 244 8 0.754476 224 8 0.935127 209 10 0.844146 0.755273 0.7667840 0.8957859 0.846055 0.869078 0.728112 0.902897 0.9000122 0.9129697 0.937519 0.786641 0.911788 0.776757 0.888374 0.670405 0.7888627 0.921938 0.893178 0.870946 0.922457 0.817994 0.8201143 0.940434 0.921255 0.8942845 0.862791 0.846954 0.8937407 0.8933741 0.919585 0.9056562 0.8732090 0.8059895 0.851096 0.695723 0.851603 0.953152 0.8743474 0.902019 0.8544467 0.7927563 0.9265444 7 0.868399 0.880649 -0.0166873 8 0.786724 0.751989 0.0347357 0.365983 3.6109e-01 insignificant 1 1.000000 insignificant 0.21622 2.0578e-01 insignificant 1 1.000000 insignificant -5.2247e-03 0.8667877 insignificant 1 insignificant 0.868399 0.879137 -0.00054931 8 0.786724 0.733747 0.052977 3.7602e-01 4.6778e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.1189e-01 4.0387e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.018488 7.1534e-01 insignificant 1.0000e+00 insignificant 0.868914 0.861747 0.0014500 8 0.876178 0.854772 0.0214064 6.1606e-02 0.60190505 insignificant 1.0000e+00 1.00000 insignificant 3.6139e-01 0.3842197 insignificant 1.0000e+00 1 insignificant -0.0279652 0.51698894 insignificant 1.00000 insignificant 0.880649 0.879137 0.01232526 10 0.751989 0.733747 0.0182412 4.2258e-01 6.2619e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.2870e-01 6.3084e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0237127 6.1388e-01 insignificant 1.0000e+00 insignificant 0.883179 0.861747 0.02201013 8 0.877320 0.854772 0.02254814 7.3151e-02 0.8810391 insignificant 1.0000e+00 1 insignificant 4.9643e-01 0.766110 insignificant 1.0000e+00 1 insignificant -0.0227405 0.55408719 insignificant 1.00000 insignificant 0.880403 0.861747 0.0112659 8 0.856038 0.854772 0.0012667 1.0669e-01 7.9475e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.9631e-01 6.4964e-01 insignificant 1.000000 1.0000e+00 insignificant -0.0464532 4.0218e-01 insignificant 1.000000 insignificant chr11 68967150 68968150 39020 MYEOV ENSG00000172927 0.0318826 549 22 0.071277 627 24 0.0630951 723 24 0.0515349 392 13 0.080833 437 24 0.064217 633 23 0.052548 996 24 0.058110 569 23 0.0691526 827 22 0.0670835 630 22 0.067545 647 24 0.042651 714 22 0.0093766 679 22 0.000000 1 0 0.066941 769 22 0.036699 682 22 0.0049438 835 22 0.105445 584 17 0.050448 550 23 0.081397 684 23 0.146689 386 22 0.027699 411 12 0.0833275 630 23 0.0556015 415 21 0.0777659 324 12 0.0339387 718 23 0.071592 370 21 0.062968 333 20 0.080140 411 23 0.033095 851 23 0.039556 738 23 0.1441276 756 23 0.0067900 656 23 0.0084877 579 23 0.054180 424 19 0.0065249 254 12 0.041441 270 19 0.021845 691 24 0.024180 895 23 0.018962 677 23 0.014456 388 17 0.011001 491 20 0.069513 580 19 0.015576 0.021072 0.0346117 0.0230908 0.025538 0.043896 0.024105 0.021338 0.0374937 0.0321463 0.028469 0.032843 0.012608 NA 0.028608 0.040082 0.0073796 0.028278 0.028353 0.036831 0.081528 0.019341 0.0911768 0.044469 0.024238 0.0160478 0.039952 0.025313 0.0274739 0.0141033 0.016113 0.0580831 0.0117309 0.0031730 0.013297 0.011438 0.062041 0.013780 0.0193200 0.019370 0.0085639 0.0073217 0.0228070 8 0.050136 0.063397 -0.0047008 23 0.129144 0.110736 0.0184077 0.795190 2.6149e-01 insignificant 1 1.000000 insignificant 0.51869 8.9585e-01 insignificant 1 1.000000 insignificant -1.7616e-02 0.1907095 insignificant 1 insignificant 0.049984 0.043857 0.03311980 22 0.094309 0.039388 0.054921 5.1135e-10 9.9999e-01 weaklyHypermeth 1.4204e-08 1.0000e+00 weaklyHypermeth 1.9832e-09 1.0000e+00 weaklyHypermeth 2.2036e-07 1.0000e+00 weaklyHypermeth 0.030548 1.2537e-02 weaklyHypermeth 2.9850e-01 insignificant 0.049976 0.032333 0.0299107 23 0.090682 0.056787 0.0338951 1.2928e-08 0.99999663 weaklyHypermeth 2.1546e-06 1.00000 weaklyHypermeth 4.9067e-07 0.9998855 weaklyHypermeth 1.2267e-04 1 weaklyHypermeth 0.0261364 0.07197105 insignificant 1.00000 insignificant 0.063249 0.043841 0.04099254 22 0.091505 0.037873 0.0536318 2.1256e-05 1.0000e+00 weaklyHypermeth 4.7235e-04 1.0000e+00 weaklyHypermeth 1.2121e-05 1.0000e+00 weaklyHypermeth 5.2700e-04 1.0000000 weaklyHypermeth 0.0481637 3.6295e-03 weaklyHypermeth 1.0675e-01 insignificant 0.063259 0.032343 0.04123151 23 0.095165 0.059059 0.03610694 4.6358e-07 1.0000000 weaklyHypermeth 5.1509e-05 1 weaklyHypermeth 1.0514e-04 1.000000 weaklyHypermeth 1.1682e-02 1 weaklyHypermeth 0.0437526 0.01583266 weaklyHypermeth 0.87006 insignificant 0.043857 0.032343 0.0026567 22 0.039388 0.059059 -0.0196702 9.9294e-01 9.8939e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9995e-01 9.7280e-01 insignificant 1.000000 1.0000e+00 insignificant -0.0044111 7.5289e-01 insignificant 1.000000 insignificant chr11 68973350 68974350 39021 MYEOV ENSG00000172927 0.8069444 114 8 0.661805 58 6 0.7003472 56 6 0.8871395 182 8 0.668485 24 2 0.768145 138 8 0.633257 95 5 0.755369 92 5 0.7650823 77 6 0.6951247 46 4 0.738352 90 8 0.592262 53 5 0.7000000 62 6 0.875000 9 1 0.872319 67 5 0.750000 69 3 0.8017677 33 3 0.642377 78 5 0.867851 93 6 0.717024 139 6 0.888858 87 7 0.746071 104 6 0.6824837 127 5 0.9218750 30 2 0.6989489 160 7 0.7993866 147 7 0.583333 33 4 0.847222 18 1 0.750397 88 7 0.788779 90 6 0.881863 68 4 0.9220148 76 7 0.6821907 134 7 0.6221873 75 5 0.525058 160 7 0.5767857 43 4 0.606085 71 5 0.590581 127 6 0.633451 90 5 0.740904 87 5 0.806667 103 5 0.565929 168 6 0.661097 100 6 0.869863 0.584858 0.7150685 0.8095178 0.730067 0.796651 0.803989 0.641866 0.6858860 0.6776473 0.716791 0.742661 0.591846 0.763162 0.797682 0.898630 0.8467053 0.578387 0.850457 0.660992 0.888584 0.683128 0.7649455 0.777397 0.620265 0.7979747 0.449772 0.897260 0.8732116 0.7350709 0.834018 0.9155251 0.5620823 0.7260274 0.657534 0.419178 0.768533 0.526238 0.8176538 0.769977 0.8576865 0.5157643 0.6679120 1 0.763124 0.777237 -0.0074690 6 0.762151 0.813378 -0.0512272 0.777039 4.9345e-01 insignificant 1 1.000000 insignificant 0.98931 1.8357e-01 insignificant 1 1.000000 insignificant -4.7670e-02 0.2017178 insignificant 1 insignificant 0.763124 0.485149 0.25340325 6 0.762151 0.569167 0.192984 2.4543e-10 9.5010e-01 hypermethylated 7.3591e-09 1.0000e+00 hypermethylated 4.9528e-03 6.0450e-01 weaklyHypermeth 9.9057e-02 1.0000e+00 weaklyHypermeth 0.144451 1.7798e-04 weaklyHypermeth 8.4751e-03 weaklyHypermeth 0.763578 0.709854 0.0519203 6 0.781154 0.672458 0.1086963 1.1762e-02 0.96759833 weaklyHypermeth 4.5240e-01 1.00000 insignificant 2.6517e-01 0.9015560 insignificant 1.0000e+00 1 insignificant 0.0633231 0.22143112 insignificant 1.00000 insignificant 0.777237 0.485149 0.26046854 8 0.813378 0.569167 0.2442116 2.1299e-08 8.1302e-01 hypermethylated 6.2644e-07 1.0000e+00 hypermethylated 1.7247e-03 8.6948e-01 weaklyHypermeth 3.7493e-02 1.0000000 weaklyHypermeth 0.1921216 9.2306e-05 weaklyHypermeth 4.6153e-03 weaklyHypermeth 0.777020 0.708885 0.05876042 6 0.790051 0.672893 0.11715757 3.7190e-03 0.9944048 weaklyHypermeth 1.5496e-01 1 insignificant 4.1208e-02 0.994053 weaklyHypermeth 1.0000e+00 1 insignificant 0.1109933 0.06296955 insignificant 1.00000 insignificant 0.485099 0.708885 -0.2515160 6 0.577813 0.672893 -0.0950805 4.9982e-01 1.0125e-03 weaklyHypometh 1.0000e+00 2.3546e-02 weaklyHypometh 5.5391e-01 9.4049e-02 insignificant 1.000000 1.0000e+00 insignificant -0.0811283 1.3555e-01 insignificant 1.000000 insignificant chr11 68987450 68988450 39022 MYEOV ENSG00000172927 0.7258788 102 5 0.727315 109 6 0.7651571 113 5 0.8102564 98 5 0.721088 41 2 0.807917 141 6 0.704545 49 5 0.763167 129 6 0.7964286 62 5 0.9008658 111 3 0.905098 133 6 0.904293 38 3 0.6672619 99 5 0.800786 72 5 0.818421 103 5 0.575630 34 2 0.5555556 7 0 0.488550 85 5 0.844329 116 5 0.778448 98 5 0.692460 61 5 0.380471 83 3 0.6694139 88 4 0.9205128 57 3 0.7664603 49 3 0.7040591 150 6 0.672155 180 5 0.517825 45 3 0.718720 89 5 0.668639 116 5 0.731015 122 6 0.7577160 116 5 0.4121627 127 6 0.4583333 87 5 0.373737 128 4 0.5329670 35 3 0.343804 164 5 0.518967 206 6 0.415080 112 5 0.696441 117 6 0.540385 68 4 0.423611 55 3 0.820191 101 4 0.798325 0.787294 0.7807133 0.7887179 0.756068 0.857549 0.707722 0.759663 0.7066820 0.8665270 0.903246 0.859756 0.735054 0.845551 0.802858 0.541017 0.6816696 0.686560 0.813495 0.734661 0.685253 0.402165 0.8528181 0.812804 0.792361 0.8338975 0.743106 0.706607 0.8497130 0.8866744 0.771557 0.9495520 0.5461237 0.5887097 0.577581 0.444938 0.446146 0.538520 0.2254300 0.600892 0.3595906 0.4932348 0.6063649 3 0.795402 0.784229 0.0104802 5 0.774808 0.602749 0.1720589 0.233372 8.9085e-01 insignificant 1 1.000000 insignificant 0.70703 8.6830e-01 insignificant 1 1.000000 insignificant 6.9762e-02 0.1432254 lowCoverage 1 lowCoverage 0.795285 0.330656 0.40064824 5 0.752288 0.467316 0.284972 2.7669e-25 9.9928e-01 hypermethylated 2.7669e-23 1.0000e+00 hypermethylated 6.5849e-07 9.7941e-01 hypermethylated 4.1155e-05 1.0000e+00 hypermethylated 0.313054 4.5373e-06 lowCoverage 2.6690e-04 lowCoverage 0.795625 0.483444 0.3194403 5 0.780320 0.612781 0.1675397 5.5887e-14 0.99403966 hypermethylated 1.8629e-11 1.00000 hypermethylated 3.2223e-05 0.9882278 hypermethylated 4.0279e-03 1 hypermethylated 0.1739079 0.09152699 lowCoverage 1.00000 lowCoverage 0.784042 0.330656 0.41337430 5 0.563024 0.467316 0.0957071 5.9908e-20 6.7302e-01 hypermethylated 3.9939e-18 1.0000e+00 hypermethylated 6.3088e-05 5.0651e-01 hypermethylated 2.3366e-03 1.0000000 hypermethylated 0.2432921 1.7156e-04 lowCoverage 7.7980e-03 lowCoverage 0.784722 0.483444 0.30653333 5 0.625582 0.612781 0.01280102 1.8070e-07 0.4337685 hypermethylated 2.2588e-05 1 hypermethylated 3.9975e-03 0.678366 weaklyHypermeth 2.4495e-01 1 insignificant 0.1041456 0.27979813 lowCoverage 1.00000 lowCoverage 0.331099 0.483444 -0.0757711 5 0.519241 0.612781 -0.0935402 6.6929e-01 6.2741e-04 weaklyHypometh 1.0000e+00 1.6087e-02 weaklyHypometh 6.6549e-01 3.6581e-02 weaklyHypometh 1.000000 6.4176e-01 insignificant -0.1391465 1.5929e-01 lowCoverage 1.000000 lowCoverage chr11 69020450 69021450 39025 MYEOV ENSG00000172927 0.7156636 452 13 0.563634 151 14 0.6649539 161 12 0.8352727 275 10 0.631448 53 4 0.754423 423 13 0.662896 101 9 0.639573 141 9 0.7764597 127 12 0.7935064 121 10 0.840716 304 11 0.511859 91 9 0.6000000 150 8 1.000000 12 2 0.762343 113 8 0.726852 37 2 0.4968535 74 8 0.407230 562 12 0.792535 234 13 0.748492 403 13 0.673652 153 10 0.434295 175 10 0.8179958 216 13 0.6989160 186 13 0.7632059 287 9 0.7679363 211 13 0.638168 169 13 0.584550 73 6 0.632557 132 10 0.682833 301 15 0.733903 261 15 0.7952211 352 12 0.2180769 262 11 0.2164773 281 11 0.314815 185 6 0.1400000 167 9 0.203194 159 11 0.192000 395 13 0.302289 450 12 0.447775 390 12 0.646816 254 11 0.384295 464 14 0.502932 371 13 0.818775 0.541155 0.5999361 0.7743700 0.626018 0.772838 0.693592 0.627036 0.8439748 0.8333919 0.825762 0.470050 0.565497 0.687214 0.634199 0.748228 0.4951222 0.389222 0.798836 0.806535 0.766500 0.372381 0.7399748 0.733900 0.709313 0.7495182 0.664759 0.694897 0.6120249 0.6469198 0.766245 0.8793103 0.1602412 0.1606360 0.164888 0.146930 0.177609 0.164035 0.3214877 0.347902 0.5721056 0.3452400 0.4749416 4 0.738269 0.733598 -0.0167010 13 0.640413 0.675185 -0.0347713 0.965520 1.5823e-01 insignificant 1 1.000000 insignificant 0.92198 1.8347e-01 insignificant 1 1.000000 insignificant 1.0966e-02 0.8027209 insignificant 1 insignificant 0.738269 0.238785 0.44636397 11 0.640413 0.174275 0.466139 1.1755e-57 9.0598e-01 hypermethylated 5.8774e-55 1.0000e+00 hypermethylated 5.0115e-23 9.9991e-01 hypermethylated 5.0115e-20 1.0000e+00 hypermethylated 0.482142 3.6457e-11 hypermethylated 9.1142e-09 hypermethylated 0.738269 0.461618 0.2383145 12 0.640413 0.382672 0.2577415 5.8072e-18 0.99989025 hypermethylated 5.8072e-15 1.00000 hypermethylated 6.1407e-09 0.9999915 hypermethylated 3.7604e-06 1 hypermethylated 0.2394141 0.00948758 weaklyHypermeth 0.58498 insignificant 0.733598 0.238785 0.45772049 11 0.675185 0.174275 0.5009099 1.2163e-49 9.9806e-01 hypermethylated 4.0542e-47 1.0000e+00 hypermethylated 7.0524e-20 1.0000e+00 hypermethylated 7.0524e-17 1.0000000 hypermethylated 0.4711756 1.7764e-09 hypermethylated 3.3115e-07 hypermethylated 0.733307 0.461897 0.26808060 12 0.635468 0.418985 0.21648266 1.8050e-17 0.9999851 hypermethylated 1.8050e-14 1 hypermethylated 8.7500e-10 0.999999 hypermethylated 4.3750e-07 1 hypermethylated 0.2284480 0.01198911 weaklyHypermeth 0.75826 insignificant 0.238785 0.461618 -0.1892195 10 0.174275 0.382672 -0.2083971 9.9468e-01 1.0943e-15 weaklyHypometh 1.0000e+00 1.5632e-13 weaklyHypometh 9.9679e-01 4.6728e-13 weaklyHypometh 1.000000 4.6728e-10 weaklyHypometh -0.2427276 1.0480e-02 weaklyHypometh 0.327495 insignificant chr11 69048350 69049350 39027 MYEOV ENSG00000172927 0.7421717 42 5 0.290476 27 3 0.4500000 18 1 0.7872549 114 6 0.592593 23 3 0.875000 20 2 0.500000 19 2 0.777778 40 2 0.2261905 19 2 0.5000000 8 0 0.731944 44 5 0.476190 13 0 0.4285714 10 0 0.238095 13 0 0.458333 18 0 0.250000 8 0 NA 0 0 0.363636 34 2 0.572279 31 2 0.648958 28 2 0.500000 21 2 0.285714 14 0 0.5208333 15 0 0.3333333 6 0 0.5314217 88 6 0.7202381 37 4 0.583333 9 0 0.416667 6 0 0.694444 31 2 0.657474 47 6 0.589006 72 6 0.6296296 34 4 0.1101190 63 6 0.1833333 44 6 0.200000 104 4 0.2247128 100 6 0.210119 60 3 0.228472 55 6 0.602098 71 6 0.541395 84 6 0.709829 52 6 0.380952 13 0 0.520692 44 6 0.656566 0.888889 0.6333333 0.9215686 0.888889 1.000000 1.000000 0.740741 0.6190476 0.6666667 0.755556 0.000000 0.666667 0.777778 1.000000 NA NA 0.575758 0.654762 0.808333 0.833333 0.500000 0.2222222 0.333333 0.661172 0.8492063 0.916667 0.444444 0.5833333 0.7111111 0.703704 0.7777778 0.0416667 0.2777778 0.728687 0.393939 0.298413 0.380556 0.8974359 0.598441 0.7196581 0.3333333 0.5555556 0 0.638941 0.629630 0.0160852 2 0.645660 0.591836 0.0538234 0.558898 7.4922e-01 lowCoverage 1 1.000000 lowCoverage 0.74087 7.5031e-01 lowCoverage 1 1.000000 lowCoverage -1.6957e-02 0.7815313 lowCoverage 1 lowCoverage 0.638258 0.166667 0.45989388 2 0.601367 0.236773 0.364594 1.4946e-14 1.0000e+00 lowCoverage 6.2277e-13 1.0000e+00 lowCoverage 2.0495e-04 1.0000e+00 lowCoverage 6.2105e-03 1.0000e+00 lowCoverage 0.328758 1.0053e-06 lowCoverage 7.7332e-05 lowCoverage 0.636882 0.632576 0.0203296 2 0.544420 0.558175 -0.0137555 3.5376e-01 0.33817846 lowCoverage 1.0000e+00 1.00000 lowCoverage 4.8161e-01 0.4900288 lowCoverage 1.0000e+00 1 lowCoverage -0.0294421 0.68504933 lowCoverage 1.00000 lowCoverage 0.629333 0.166667 0.44566924 2 0.582483 0.236773 0.3457094 3.6331e-15 9.9998e-01 lowCoverage 1.5138e-13 1.0000e+00 lowCoverage 3.6592e-06 1.0000e+00 lowCoverage 2.0329e-04 1.0000000 lowCoverage 0.3457151 1.1020e-06 lowCoverage 9.1833e-05 lowCoverage 0.628032 0.632576 0.01220066 2 0.558551 0.558175 0.00037641 5.3141e-01 0.3911775 lowCoverage 1.0000e+00 1 lowCoverage 4.2765e-01 0.347473 lowCoverage 1.0000e+00 1 lowCoverage -0.0124854 0.85598038 lowCoverage 1.00000 lowCoverage 0.160757 0.632576 -0.4732705 6 0.127741 0.558175 -0.4304343 1.0000e+00 1.6328e-16 hypomethylated 1.0000e+00 3.2656e-14 hypomethylated 1.0000e+00 5.8606e-06 hypomethylated 1.000000 7.3257e-04 hypomethylated -0.3582005 1.5859e-03 lowCoverage 0.079293 lowCoverage chr11 69414850 69415850 39029 FGF3 ENSG00000186895 0.8545732 737 23 0.899053 826 24 0.6927044 975 26 0.9423504 791 16 0.926825 359 22 0.925295 886 26 0.777949 565 23 0.858269 530 21 0.8829065 467 21 0.8643384 498 20 0.855468 811 23 0.829190 353 19 0.9520322 581 21 0.958898 215 12 0.940806 518 21 0.889351 264 15 0.8983592 131 11 0.869903 907 18 0.935683 659 19 0.939675 582 20 0.911546 278 20 0.924287 331 13 0.9338637 390 23 0.8990448 292 20 0.8283765 564 14 0.8995333 769 24 0.835172 365 21 0.910526 234 18 0.934806 407 19 0.908265 831 24 0.876708 743 24 0.9333856 744 26 0.7509295 930 26 0.7177682 502 21 0.775892 766 25 0.8823529 201 13 0.725914 467 20 0.751578 881 24 0.894529 667 18 0.927225 744 21 0.923930 754 16 0.897807 590 17 0.953431 767 15 0.899142 0.894945 0.7087944 0.9023494 0.899201 0.910286 0.867220 0.908763 0.9069602 0.9280000 0.901861 0.875781 0.928395 0.926842 0.925190 0.892634 0.8888500 0.883535 0.916874 0.927259 0.905576 0.899509 0.9295007 0.868845 0.882970 0.9234547 0.852419 0.964540 0.9558465 0.9379059 0.928557 0.9394838 0.7741957 0.8289581 0.824381 0.905734 0.786368 0.744588 0.9067544 0.920241 0.9170542 0.8942222 0.9297180 11 0.887477 0.915083 -0.0261018 24 0.812384 0.861556 -0.0491714 0.999980 1.1406e-05 weaklyHypometh 1 0.011406 weaklyHypometh 0.99995 2.9231e-03 weaklyHypometh 1 0.974379 insignificant -1.4945e-02 0.4097719 insignificant 1 insignificant 0.887554 0.764282 0.12361764 24 0.839464 0.731070 0.108393 2.2967e-20 9.9379e-01 weaklyHypermeth 1.3510e-18 1.0000e+00 weaklyHypermeth 1.9090e-05 9.8424e-01 weaklyHypermeth 7.0705e-04 1.0000e+00 weaklyHypermeth 0.117276 2.6972e-03 weaklyHypermeth 7.7063e-02 weaklyHypermeth 0.887992 0.914537 -0.0181256 18 0.886441 0.918218 -0.0317769 9.9850e-01 0.00257964 weaklyHypometh 1.0000e+00 0.49585 insignificant 9.9990e-01 0.0126678 weaklyHypometh 1.0000e+00 1 insignificant -0.0347030 0.07065709 insignificant 1.00000 insignificant 0.915083 0.764078 0.15020915 24 0.861556 0.707488 0.1540681 3.3100e-23 1.0000e+00 weaklyHypermeth 2.7583e-21 1.0000e+00 weaklyHypermeth 2.4443e-07 9.9998e-01 weaklyHypermeth 1.7581e-05 1.0000000 weaklyHypermeth 0.1322204 1.7163e-03 weaklyHypermeth 5.9952e-02 weaklyHypermeth 0.915697 0.914537 0.00233835 18 0.903479 0.918218 -0.01473880 3.5061e-01 0.3329987 insignificant 1.0000e+00 1 insignificant 7.5327e-01 0.601201 insignificant 1.0000e+00 1 insignificant -0.0197583 0.21301538 insignificant 1.00000 insignificant 0.764832 0.914537 -0.1410464 18 0.775263 0.918218 -0.1429545 9.9999e-01 1.0375e-07 weaklyHypometh 1.0000e+00 4.9404e-06 weaklyHypometh 9.9919e-01 3.1088e-04 weaklyHypometh 1.000000 1.6362e-02 weaklyHypometh -0.1519787 8.2904e-04 weaklyHypometh 0.055042 weaklyHypometh chr11 69471650 69472650 39032 FGF3 ENSG00000186895 0.6478214 239 10 0.392202 288 10 0.4893607 206 9 0.6714289 278 10 0.210119 92 7 0.661374 310 9 0.576487 167 9 0.446338 261 10 0.4888061 277 10 0.5650903 215 9 0.698694 295 12 0.607143 38 2 0.3530678 387 12 0.709982 107 8 0.591683 221 9 0.712437 42 2 0.3020833 49 4 0.574414 272 10 0.505854 211 8 0.577413 230 9 0.639462 114 11 0.431710 211 7 0.7365236 179 10 0.6196031 199 10 0.6851102 175 8 0.4972480 499 11 0.751408 86 7 0.477273 35 3 0.632946 226 9 0.480703 422 10 0.496527 428 11 0.7188606 370 10 0.4981468 305 10 0.5041653 227 12 0.423246 120 6 0.4508929 162 8 0.526197 187 10 0.453524 408 11 0.525129 300 9 0.645870 325 10 0.523595 255 8 0.433058 253 7 0.459954 265 9 0.634894 0.302638 0.4489155 0.5565075 0.300572 0.625276 0.485967 0.415861 0.4063931 0.5124736 0.638891 0.472233 0.195493 0.727181 0.442625 0.529868 0.2791016 0.420417 0.238094 0.403531 0.571339 0.274588 0.7638094 0.689833 0.541576 0.4283925 0.507980 0.559288 0.5407399 0.3724054 0.388916 0.6672036 0.3835463 0.2985864 0.167054 0.310743 0.338062 0.189221 0.3175021 0.396109 0.3747787 0.3131594 0.3388104 3 0.462826 0.547894 -0.0569828 10 0.510033 0.524908 -0.0148749 0.972849 3.9613e-02 weaklyHypometh 1 1.000000 insignificant 0.99380 4.9282e-02 weaklyHypometh 1 1.000000 insignificant -5.8191e-02 0.2136083 insignificant 1 insignificant 0.462808 0.373314 0.12167260 10 0.510805 0.449017 0.061788 1.0372e-04 8.4626e-01 weaklyHypermeth 2.2068e-03 1.0000e+00 weaklyHypermeth 3.6011e-03 9.4435e-01 weaklyHypermeth 7.5023e-02 1.0000e+00 weaklyHypermeth 0.063061 8.6915e-02 insignificant 1.0000e+00 insignificant 0.463047 0.414163 0.0296500 9 0.549267 0.551760 -0.0024930 2.6819e-01 0.09571663 insignificant 1.0000e+00 1.00000 insignificant 2.8432e-01 0.2202939 insignificant 1.0000e+00 1 insignificant 0.0215686 0.66459991 insignificant 1.00000 insignificant 0.548266 0.373314 0.16754562 10 0.565286 0.449017 0.1162686 3.6140e-06 9.4186e-01 weaklyHypermeth 8.6047e-05 1.0000e+00 weaklyHypermeth 1.0016e-04 9.4048e-01 weaklyHypermeth 3.4538e-03 1.0000000 weaklyHypermeth 0.1212526 4.9232e-03 weaklyHypermeth 1.3264e-01 insignificant 0.548299 0.414163 0.07960398 9 0.546055 0.551760 -0.00570456 1.2068e-01 0.7199388 insignificant 1.0000e+00 1 insignificant 9.6678e-03 0.787525 weaklyHypermeth 3.7184e-01 1 insignificant 0.0797600 0.13627611 insignificant 1.00000 insignificant 0.373580 0.414460 -0.1294259 9 0.486435 0.597740 -0.1113043 1.0000e+00 2.1276e-05 weaklyHypometh 1.0000e+00 7.5985e-04 weaklyHypometh 9.9918e-01 2.3932e-03 weaklyHypometh 1.000000 7.9772e-02 weaklyHypometh -0.0414926 3.4408e-01 insignificant 1.000000 insignificant chr11 69472350 69473350 39033 FGF3 ENSG00000186895 0.5811431 337 9 0.322510 266 10 0.4146522 268 10 0.5430352 364 9 0.321878 170 10 0.577488 376 9 0.512623 253 10 0.392537 306 10 0.3999767 399 10 0.4399967 294 10 0.639211 271 10 0.519114 151 6 0.1071812 504 10 0.651409 153 9 0.388160 351 10 0.523136 130 6 0.1566425 162 8 0.312371 383 9 0.210273 180 7 0.433378 304 9 0.516598 133 10 0.362455 270 9 0.7077884 179 10 0.6134968 190 10 0.4728939 185 9 0.3682535 431 10 0.644960 93 7 0.516725 93 6 0.502616 196 9 0.318006 398 10 0.308686 349 10 0.6844828 373 10 0.2190979 381 10 0.1730130 206 10 0.300236 195 6 0.1277778 122 6 0.263525 208 10 0.050025 344 10 0.378882 306 9 0.406762 342 9 0.371312 323 9 0.339433 349 8 0.330474 323 9 0.630230 0.404289 0.5648746 0.5937494 0.446739 0.656367 0.545096 0.459907 0.4949611 0.5540258 0.670929 0.534899 0.139463 0.710727 0.465037 0.556332 0.2360927 0.381038 0.225372 0.481763 0.537389 0.370420 0.7447467 0.728088 0.496680 0.4327312 0.518388 0.599617 0.5198614 0.3632259 0.356638 0.7471312 0.2003183 0.2022299 0.460030 0.122600 0.302037 0.036865 0.4573225 0.422664 0.4836771 0.4558080 0.4317436 6 0.438000 0.452249 -0.0382997 10 0.394391 0.404217 -0.0098252 0.959527 1.4342e-01 insignificant 1 1.000000 insignificant 0.99759 2.5774e-02 weaklyHypometh 1 1.000000 insignificant -7.9078e-02 0.1487410 insignificant 1 insignificant 0.437978 0.168269 0.24535953 10 0.384791 0.158547 0.226244 4.2082e-14 1.0000e+00 hypermethylated 1.6833e-12 1.0000e+00 hypermethylated 7.5898e-10 1.0000e+00 hypermethylated 1.0931e-07 1.0000e+00 hypermethylated 0.233390 3.9684e-04 hypermethylated 1.7254e-02 hypermethylated 0.438156 0.413877 0.0051114 9 0.430245 0.349476 0.0807687 7.3355e-03 0.40706568 weaklyHypermeth 3.1893e-01 1.00000 insignificant 1.5597e-02 0.4547623 weaklyHypermeth 7.1806e-01 1 insignificant 0.0569631 0.13508084 insignificant 1.00000 insignificant 0.452562 0.168269 0.27836229 10 0.440964 0.158547 0.2824170 5.9840e-14 1.0000e+00 hypermethylated 2.2163e-12 1.0000e+00 hypermethylated 1.1337e-11 1.0000e+00 hypermethylated 2.2675e-09 1.0000000 hypermethylated 0.3124679 5.1972e-05 hypermethylated 2.7354e-03 hypermethylated 0.452529 0.413877 0.05710993 9 0.418236 0.349476 0.06875981 1.3368e-02 0.8772035 weaklyHypermeth 3.7966e-01 1 insignificant 1.1683e-04 0.977465 weaklyHypermeth 1.1683e-02 1 weaklyHypermeth 0.1360408 0.00730324 weaklyHypermeth 0.66393 insignificant 0.168385 0.414129 -0.2252625 9 0.174401 0.384424 -0.2100229 1.0000e+00 1.2504e-10 hypomethylated 1.0000e+00 8.9313e-09 hypomethylated 9.9920e-01 5.5567e-06 hypomethylated 1.000000 7.3257e-04 hypomethylated -0.1764270 3.9835e-03 weaklyHypometh 0.142268 insignificant chr11 69494850 69495850 39037 FGF3 ENSG00000186895 0.8275329 365 9 0.789926 473 9 0.6362809 116 8 0.8000396 343 9 0.739992 83 7 0.743766 365 9 0.779652 75 7 0.754067 135 7 0.7184416 151 7 0.8266267 81 7 0.783785 272 9 0.616667 34 3 0.7833566 156 5 0.548928 63 6 0.882062 87 7 0.416667 19 0 0.7994475 736 1 0.874446 355 7 0.857421 114 7 0.661368 285 7 0.666775 78 5 0.679630 97 4 0.7633943 141 5 0.6066726 110 7 0.7700797 119 8 0.7945228 292 9 0.712686 74 5 0.707852 79 5 0.856478 129 5 0.729118 326 9 0.809653 297 9 0.6979383 385 9 0.5606623 239 9 0.6785567 104 9 0.527694 231 7 0.7125000 26 3 0.483970 140 7 0.570865 271 9 0.790893 363 9 0.838765 370 7 0.826511 486 9 0.728137 218 5 0.788154 410 8 0.835318 0.741312 0.7426638 0.7957167 0.789497 0.741350 0.817143 0.791029 0.7072089 0.8338914 0.824828 0.672814 0.766021 0.717442 0.896305 0.456284 0.7821441 0.863639 0.869490 0.731744 0.762348 0.762293 0.7886793 0.738367 0.845014 0.7771581 0.630690 0.808400 0.8552122 0.8062462 0.805861 0.8137370 0.4700369 0.6912243 0.476221 0.587035 0.597140 0.472263 0.7972204 0.834736 0.7934707 0.6725870 0.7780460 1 0.843547 0.833098 -0.0028990 7 0.734681 0.647857 0.0868236 0.436927 5.6807e-01 insignificant 1 1.000000 insignificant 0.50583 2.6864e-01 insignificant 1 1.000000 insignificant 9.1236e-03 0.7825073 insignificant 1 insignificant 0.843547 0.647873 0.18511674 7 0.734681 0.580774 0.153907 4.3207e-18 9.8107e-01 weaklyHypermeth 2.1604e-16 1.0000e+00 weaklyHypermeth 8.8647e-05 9.6335e-01 weaklyHypermeth 2.8596e-03 1.0000e+00 weaklyHypermeth 0.152982 5.7401e-03 weaklyHypermeth 1.4718e-01 insignificant 0.844150 0.838657 0.0067009 7 0.778895 0.791686 -0.0127909 6.1292e-01 0.23832602 insignificant 1.0000e+00 1.00000 insignificant 8.5690e-01 0.1605444 insignificant 1.0000e+00 1 insignificant -0.0524685 0.12144505 insignificant 1.00000 insignificant 0.833098 0.647873 0.18715820 9 0.647857 0.580774 0.0670833 2.9284e-12 9.9989e-01 weaklyHypermeth 1.0458e-10 1.0000e+00 weaklyHypermeth 1.2848e-04 9.9933e-01 weaklyHypermeth 4.2827e-03 1.0000000 weaklyHypermeth 0.1438585 8.0045e-03 weaklyHypermeth 1.9523e-01 insignificant 0.837429 0.838657 0.00979129 9 0.791825 0.791686 0.00013897 5.4826e-01 0.5504030 insignificant 1.0000e+00 1 insignificant 6.0749e-01 0.525071 insignificant 1.0000e+00 1 insignificant -0.0615920 0.04641644 weaklyHypometh 1.00000 insignificant 0.656627 0.838657 -0.1727114 9 0.598724 0.791686 -0.1929628 9.9925e-01 1.8730e-07 weaklyHypometh 1.0000e+00 8.5136e-06 weaklyHypometh 9.9831e-01 5.9804e-04 weaklyHypometh 1.000000 2.7184e-02 weaklyHypometh -0.2054506 1.2573e-03 weaklyHypometh 0.066176 weaklyHypometh chr11 69634750 69635750 39039 ANO1 ENSG00000131620 0.8086552 325 10 0.733623 254 9 0.5084072 116 7 0.6070451 393 10 0.576667 104 4 0.787271 462 10 0.708935 122 8 0.715435 163 8 0.5410539 89 4 0.7222222 42 3 0.793232 356 10 0.925000 25 1 0.7855556 40 4 0.915657 38 4 0.498575 63 4 0.844156 29 1 0.7936508 23 1 0.370213 295 7 0.743456 212 8 0.433264 298 8 0.773076 138 10 0.768473 47 2 0.7104366 132 7 0.8107143 63 5 0.7372470 238 9 0.6586347 319 10 0.788900 138 7 0.673554 59 4 0.695529 193 10 0.579514 312 10 0.571271 272 10 0.7487749 340 10 0.3840989 304 10 0.5197024 204 10 0.307893 448 8 0.1009609 185 7 0.424237 204 10 0.357659 409 10 0.394797 373 8 0.565714 346 8 0.553707 316 8 0.393019 124 4 0.599967 360 10 0.798875 0.834040 0.6124291 0.7438944 0.754412 0.806776 0.796070 0.750267 0.7640391 0.8167003 0.787351 0.779434 0.571387 0.917112 0.591723 0.901405 0.5952617 0.550955 0.825763 0.812663 0.805804 0.644210 0.8173916 0.948529 0.802848 0.7037570 0.745082 0.915146 0.7605261 0.6772302 0.756061 0.7975368 0.3546873 0.5616422 0.277166 0.212447 0.433959 0.213363 0.5901286 0.601245 0.6433640 0.5816293 0.6775210 2 0.724819 0.715874 -0.0065196 8 0.574111 0.548638 0.0254730 0.997888 9.4339e-01 insignificant 1 1.000000 insignificant 0.99897 8.0005e-01 insignificant 1 1.000000 insignificant -1.9073e-02 0.6510220 insignificant 1 insignificant 0.725000 0.340183 0.33954648 8 0.593874 0.335503 0.258371 4.9554e-18 1.0000e+00 hypermethylated 2.3597e-16 1.0000e+00 hypermethylated 2.5039e-07 1.0000e+00 hypermethylated 1.6693e-05 1.0000e+00 hypermethylated 0.341512 6.5415e-04 hypermethylated 2.5160e-02 hypermethylated 0.725182 0.564187 0.1536149 8 0.617342 0.540469 0.0768728 1.6471e-07 0.99387655 weaklyHypermeth 2.3531e-05 1.00000 weaklyHypermeth 1.1424e-04 0.9998439 weaklyHypermeth 1.1424e-02 1 weaklyHypermeth 0.1891630 0.00785967 weaklyHypermeth 0.56141 insignificant 0.716578 0.340183 0.33670481 10 0.628274 0.335503 0.2927717 1.8104e-19 1.0000e+00 hypermethylated 1.0649e-17 1.0000e+00 hypermethylated 3.5435e-11 1.0000e+00 hypermethylated 5.0622e-09 1.0000000 hypermethylated 0.3605851 8.0507e-04 hypermethylated 3.2203e-02 hypermethylated 0.718121 0.564187 0.17049296 8 0.710343 0.540469 0.16987379 1.1087e-10 0.9997330 weaklyHypermeth 2.2174e-08 1 weaklyHypermeth 8.3572e-09 0.999994 weaklyHypermeth 2.7857e-06 1 weaklyHypermeth 0.2082363 0.00555514 weaklyHypermeth 0.61724 insignificant 0.341170 0.564187 -0.1816214 8 0.398545 0.540469 -0.1419242 9.9981e-01 9.4074e-05 weaklyHypometh 1.0000e+00 2.7669e-03 weaklyHypometh 9.9788e-01 5.3791e-02 insignificant 1.000000 8.1501e-01 insignificant -0.1523488 6.6404e-02 insignificant 1.000000 insignificant chr11 69635150 69636150 39040 ANO1 ENSG00000131620 0.8391356 458 10 0.724974 440 10 0.6159050 220 8 0.5928179 481 10 0.545330 150 5 0.740455 584 10 0.641077 175 8 0.702611 247 8 0.5263317 149 5 0.7254422 103 4 0.779249 457 10 0.772619 65 3 0.7237378 119 4 0.911199 107 5 0.488046 168 4 0.841095 98 3 0.3809524 21 1 0.352047 457 8 0.723743 417 8 0.434133 394 8 0.782063 174 10 0.513062 72 2 0.7157167 262 8 0.7977235 122 5 0.6944224 333 10 0.7007824 497 10 0.743237 242 7 0.708888 120 5 0.654890 387 10 0.590573 528 10 0.636568 467 10 0.7456234 355 10 0.2849253 409 10 0.3452615 313 10 0.181166 436 7 0.2150354 290 10 0.381517 341 10 0.264762 580 10 0.328509 403 8 0.506436 441 8 0.464463 441 8 0.300949 350 5 0.501879 400 10 0.846999 0.806326 0.6211258 0.8115800 0.782733 0.835462 0.770040 0.766872 0.7975912 0.8565469 0.865444 0.751840 0.682021 0.903130 0.751884 0.875100 NA 0.493652 0.835179 0.859322 0.879666 0.222046 0.8539858 0.957000 0.709360 0.7797253 0.733502 0.932671 0.7366932 0.7930903 0.842538 0.8702138 0.3482553 0.5198989 0.297192 0.506198 0.420218 0.470883 0.6083518 0.579711 0.6301645 0.5050876 0.5242225 3 0.736425 0.746978 -0.0167391 8 0.558074 0.611493 -0.0534196 0.999357 8.8161e-01 insignificant 1 1.000000 insignificant 0.99999 6.5527e-01 insignificant 1 1.000000 insignificant -3.7251e-02 0.3851304 insignificant 1 insignificant 0.736743 0.317279 0.39744932 8 0.603842 0.302539 0.301303 3.1001e-29 1.0000e+00 hypermethylated 3.4446e-27 1.0000e+00 hypermethylated 1.6671e-09 1.0000e+00 hypermethylated 2.0839e-07 1.0000e+00 hypermethylated 0.374267 2.3093e-07 hypermethylated 2.3093e-05 hypermethylated 0.736872 0.478624 0.2637077 8 0.627806 0.501040 0.1267655 6.1548e-16 0.99996131 hypermethylated 3.0774e-13 1.00000 hypermethylated 1.1240e-06 0.9999989 hypermethylated 1.6660e-04 1 hypermethylated 0.2325979 0.00208894 weaklyHypermeth 0.20889 insignificant 0.746256 0.316991 0.39498387 10 0.615324 0.256042 0.3592824 5.5498e-28 1.0000e+00 hypermethylated 7.9283e-26 1.0000e+00 hypermethylated 6.5149e-14 1.0000e+00 hypermethylated 2.1716e-11 1.0000000 hypermethylated 0.4115179 5.0410e-07 hypermethylated 5.0410e-05 hypermethylated 0.747809 0.478624 0.27779552 8 0.717682 0.501040 0.21664179 3.7615e-17 0.9999900 hypermethylated 1.8807e-14 1 hypermethylated 1.1517e-10 1.000000 hypermethylated 1.1517e-07 1 hypermethylated 0.2698486 0.00132953 weaklyHypermeth 0.26591 insignificant 0.317642 0.478368 -0.1616142 8 0.299219 0.459460 -0.1602411 9.9999e-01 8.0334e-06 weaklyHypometh 1.0000e+00 3.0898e-04 weaklyHypometh 9.9999e-01 6.5387e-03 weaklyHypometh 1.000000 1.9232e-01 insignificant -0.1416693 3.1829e-02 weaklyHypometh 0.663100 insignificant chr11 70265850 70266850 39056 ENSG00000207196 0.2361342 628 10 0.127645 514 11 0.2707850 369 11 0.1577492 486 11 0.074736 390 11 0.224632 981 11 0.205156 499 11 0.104261 413 11 0.1306848 325 11 0.1842056 270 8 0.262361 648 11 0.117986 134 7 0.1080842 342 8 0.316413 277 8 0.209550 415 8 0.354624 81 7 0.0000000 15 1 0.228376 783 9 0.095967 635 10 0.100633 814 11 0.464221 207 9 0.258333 33 4 0.2099926 469 11 0.2362285 194 11 0.3840156 62 3 0.1246144 817 11 0.107226 416 10 0.148206 202 10 0.119836 661 10 0.074230 816 11 0.117134 878 11 0.3769205 630 10 0.4502496 498 11 0.5354468 468 10 0.327526 1110 11 0.1428571 37 3 0.355838 393 11 0.356632 763 11 0.163767 706 11 0.247806 613 11 0.098329 578 10 0.077341 790 8 0.196156 543 11 0.275482 0.106169 0.2618756 0.1564452 0.081253 0.234952 0.140085 0.096718 0.1321657 0.1027194 0.276699 0.155952 0.052890 0.171411 0.165010 0.230256 NA 0.238935 0.123235 0.101469 0.344377 0.186254 0.2308523 0.198970 0.220978 0.0940490 0.165083 0.147722 0.0931040 0.0507962 0.085517 0.4435470 0.4207398 0.5925673 0.159544 0.112810 0.424475 0.279409 0.1556402 0.258889 0.1253912 0.1191384 0.1878261 7 0.162324 0.169517 -0.0002393 11 0.226111 0.224905 0.0012053 0.912024 9.3849e-01 insignificant 1 1.000000 insignificant 0.77377 7.7553e-01 insignificant 1 1.000000 insignificant -4.2914e-02 0.3219725 insignificant 1 insignificant 0.162324 0.359131 -0.19360183 11 0.226111 0.332245 -0.106134 1.0000e+00 7.8301e-22 weaklyHypometh 1.0000e+00 3.9151e-19 weaklyHypometh 9.9987e-01 1.5289e-07 weaklyHypometh 1.0000e+00 9.9455e-05 weaklyHypometh -0.185926 1.6148e-02 weaklyHypometh 3.5885e-01 insignificant 0.162231 0.157373 -0.0039706 11 0.161620 0.167397 -0.0057768 3.5585e-01 0.46158267 insignificant 1.0000e+00 1.00000 insignificant 4.9919e-01 0.4385724 insignificant 1.0000e+00 1 insignificant 0.0188194 0.62620808 insignificant 1.00000 insignificant 0.169517 0.359131 -0.18216958 11 0.224905 0.332245 -0.1073394 1.0000e+00 2.1571e-12 weaklyHypometh 1.0000e+00 1.0785e-09 weaklyHypometh 9.9937e-01 2.0987e-04 weaklyHypometh 1.0000e+00 0.0970570 weaklyHypometh -0.1430117 5.4128e-02 insignificant 8.4576e-01 insignificant 0.169762 0.157276 -0.00116250 11 0.208841 0.143483 0.06535789 9.1380e-01 0.8629946 insignificant 1.0000e+00 1 insignificant 7.6035e-01 0.741285 insignificant 1.0000e+00 1 insignificant 0.0617334 0.22513354 insignificant 1.00000 insignificant 0.359241 0.157373 0.1975710 11 0.359932 0.167397 0.1925353 6.3070e-08 9.9991e-01 weaklyHypermeth 3.1535e-05 1.0000e+00 weaklyHypermeth 5.6492e-05 9.9996e-01 weaklyHypermeth 0.018831 1.0000e+00 weaklyHypermeth 0.2047451 1.1447e-02 weaklyHypermeth 0.336670 insignificant chr11 71625950 71626950 39082 INPPL1 ENSG00000165458 0.7205696 267 12 0.548946 257 12 0.6327680 364 12 0.6856102 242 12 0.668180 197 11 0.686351 394 12 0.736754 251 12 0.638272 362 12 0.6555159 387 12 0.6438477 464 12 0.656730 317 12 0.555513 299 12 0.6427236 393 12 0.723500 188 10 0.735658 339 12 0.545551 198 12 0.6376634 128 9 0.683084 347 12 0.531841 190 11 0.606805 282 12 0.669636 118 10 0.701043 273 12 0.6438312 270 12 0.6060328 136 10 0.7148562 194 12 0.6710262 352 12 0.538928 287 12 0.544036 181 11 0.686421 227 12 0.629972 374 12 0.657608 347 12 0.7238829 354 12 0.6710664 269 12 0.7047243 224 12 0.843254 49 5 0.6568936 77 7 0.682382 206 12 0.629291 351 12 0.670694 308 12 0.729341 330 12 0.697716 230 12 0.702777 204 12 0.627295 263 12 0.728635 0.578948 0.6626105 0.6993567 0.669005 0.703685 0.739277 0.694325 0.6718381 0.6899607 0.674720 0.611132 0.661067 0.686408 0.753262 0.529929 0.6533494 0.707980 0.572427 0.697129 0.747269 0.731230 0.6753197 0.704920 0.750225 0.6855243 0.658129 0.680578 0.7166863 0.6629499 0.671054 0.7475876 0.6627554 0.6656316 0.857764 0.637957 0.740719 0.657230 0.7003229 0.746353 0.7344766 0.7198220 0.6606166 11 0.633992 0.696756 -0.0209333 12 0.594607 0.556686 0.0379205 0.788241 2.0660e-02 weaklyHypometh 1 1.000000 insignificant 0.91314 1.2280e-01 insignificant 1 1.000000 insignificant -2.1451e-03 0.9247627 insignificant 1 insignificant 0.634317 0.682823 0.00267369 12 0.686085 0.671214 0.014871 1.2279e-02 9.8388e-08 weaklyHypermeth 1.6372e-01 2.4597e-05 weaklyHypermeth 9.3169e-01 4.8263e-03 inconclusive 1.0000e+00 5.7462e-01 insignificant -0.051141 1.7392e-01 insignificant 1.0000e+00 insignificant 0.634255 0.730337 -0.0282400 12 0.659925 0.683144 -0.0232185 9.9086e-01 0.00216438 weaklyHypometh 1.0000e+00 0.49585 insignificant 9.9157e-01 0.0060221 weaklyHypometh 1.0000e+00 1 insignificant -0.0387702 0.11249877 insignificant 1.00000 insignificant 0.698326 0.682823 0.02787399 12 0.642330 0.671214 -0.0288832 2.7657e-03 3.1865e-05 weaklyHypermeth 4.5340e-02 6.3731e-03 weaklyHypermeth 5.8218e-01 6.4749e-02 insignificant 1.0000e+00 1.0000000 insignificant -0.0489958 2.0284e-01 insignificant 1.0000e+00 insignificant 0.698904 0.730337 -0.01289904 12 0.675025 0.683144 -0.00811920 6.6652e-01 0.1037139 insignificant 1.0000e+00 1 insignificant 9.1397e-01 0.218639 insignificant 1.0000e+00 1 insignificant -0.0366250 0.16255861 insignificant 1.00000 insignificant 0.683135 0.730337 -0.0222258 12 0.685481 0.683144 0.0023376 1.0993e-01 1.2199e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.0654e-01 8.3530e-01 insignificant 1.000000 1.0000e+00 insignificant 0.0123708 7.3577e-01 insignificant 1.000000 insignificant chr11 72168950 72169950 39103 ENSG00000202522 0.3190035 371 14 0.294842 478 14 0.3995371 327 14 0.2688132 378 12 0.328897 205 14 0.382962 573 14 0.399339 335 14 0.295173 406 14 0.2973097 405 14 0.3130142 297 14 0.389462 531 14 0.334770 272 14 0.3485904 492 14 0.597356 45 2 0.315257 340 14 0.297042 198 13 0.2118201 267 13 0.275841 435 13 0.419835 338 13 0.304415 492 14 0.408398 228 13 0.257828 241 9 0.3436236 478 14 0.3085802 238 13 0.3265789 166 8 0.4039995 554 14 0.216504 344 13 0.365552 156 12 0.331434 434 14 0.371947 685 14 0.309165 694 14 0.4204596 628 14 0.4008479 366 14 0.3142345 384 14 0.665392 363 10 0.4262553 136 7 0.544491 188 14 0.282821 552 14 0.372094 460 14 0.352674 450 14 0.325958 332 12 0.281057 386 13 0.321784 448 13 0.295912 0.253694 0.3745675 0.2526383 0.238770 0.362941 0.326199 0.253835 0.2456895 0.3064289 0.361148 0.285642 0.346477 NA 0.242621 0.174576 0.1516123 0.245992 0.383886 0.319673 0.365379 0.196874 0.3063929 0.293093 0.285890 0.3524736 0.204635 0.279567 0.2634000 0.3113306 0.256315 0.3856903 0.3408482 0.2829099 0.457867 0.357148 0.522508 0.241749 0.2969051 0.294458 0.2538339 0.2504754 0.2811583 9 0.324332 0.321709 -0.0044306 14 0.298633 0.305946 -0.0073131 0.958548 7.6163e-01 insignificant 1 1.000000 insignificant 0.80678 7.6408e-01 insignificant 1 1.000000 insignificant 9.9138e-04 0.9687419 insignificant 1 insignificant 0.324648 0.406234 -0.03356993 14 0.341295 0.385903 -0.044609 3.5690e-01 5.4867e-06 weaklyHypometh 1.0000e+00 1.0973e-03 weaklyHypometh 7.6875e-01 1.0012e-05 weaklyHypometh 1.0000e+00 3.3374e-03 weaklyHypometh -0.099343 1.5784e-01 insignificant 1.0000e+00 insignificant 0.324648 0.219171 0.0166056 14 0.341295 0.335818 0.0054764 9.2321e-03 0.06024066 weaklyHypermeth 3.6928e-01 1.00000 insignificant 4.4686e-02 0.1283996 weaklyHypermeth 1.0000e+00 1 insignificant 0.0089505 0.70914712 insignificant 1.00000 insignificant 0.322041 0.406234 -0.02780263 14 0.349652 0.385903 -0.0362507 6.3088e-01 2.4454e-05 weaklyHypometh 1.0000e+00 6.1136e-03 weaklyHypometh 8.7670e-01 2.9117e-04 weaklyHypometh 1.0000e+00 0.0970570 weaklyHypometh -0.1003344 1.5435e-01 insignificant 1.0000e+00 insignificant 0.322041 0.219171 0.01891541 14 0.349652 0.335818 0.01383423 3.7826e-02 0.1262500 weaklyHypermeth 8.5968e-01 1 insignificant 1.8277e-01 0.238315 insignificant 1.0000e+00 1 insignificant 0.0079591 0.73959052 insignificant 1.00000 insignificant 0.406234 0.219171 0.0479095 14 0.385903 0.335818 0.0500850 2.4772e-02 9.9482e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 4.8434e-02 9.9759e-01 weaklyHypermeth 1.000000 1.0000e+00 insignificant 0.1082936 1.2826e-01 insignificant 1.000000 insignificant chr11 72175850 72176850 39104 ENSG00000202522 0.3344208 235 7 0.394589 384 7 0.2876340 423 7 0.3749327 229 7 0.486423 287 7 0.408056 454 7 0.679721 255 7 0.473105 399 7 0.4473969 402 7 0.3548124 409 7 0.474193 381 7 0.489592 297 7 0.7070752 311 7 0.396678 361 7 0.637069 487 7 0.250189 195 7 0.4642857 29 1 0.434291 388 7 0.511301 426 7 0.420271 290 7 0.435543 119 7 0.512901 157 7 0.4807041 232 7 0.2869678 261 7 0.5059874 133 7 0.5475071 441 7 0.314155 484 7 0.649930 182 7 0.411247 309 7 0.526698 442 7 0.545576 457 7 0.4780913 238 7 0.8621684 228 7 0.5348578 235 7 0.861765 345 5 0.7091837 47 5 0.685032 196 7 0.575452 302 7 0.524370 325 7 0.563627 282 7 0.277237 219 7 0.406288 249 7 0.524486 246 7 0.361140 0.415509 0.2944870 0.4005154 0.509818 0.457601 0.701849 0.493741 0.4678456 0.3706124 0.491575 0.502183 0.733081 0.527383 0.664774 0.274991 0.5025000 0.445494 0.535927 0.393483 0.453366 0.530610 0.5005185 0.250565 0.505979 0.5670799 0.423852 0.703428 0.4267301 0.6230224 0.570917 0.4947493 0.8539032 0.4979452 0.872395 0.701709 0.767501 0.642572 0.5341353 0.568500 0.2907096 0.4165655 0.5391248 7 0.473954 0.492330 -0.0289159 7 0.422229 0.401364 0.0208644 0.930664 2.4498e-01 insignificant 1 1.000000 insignificant 0.95910 1.2922e-01 insignificant 1 1.000000 insignificant -2.3307e-02 0.5591461 insignificant 1 insignificant 0.474089 0.736881 -0.24657831 7 0.441365 0.588869 -0.147504 8.8409e-01 4.2289e-22 hypomethylated 1.0000e+00 3.9151e-19 hypomethylated 9.8843e-01 1.9891e-07 hypomethylated 1.0000e+00 9.9455e-05 hypomethylated -0.253441 4.2984e-03 weaklyHypometh 1.1617e-01 insignificant 0.474065 0.490537 0.0044966 7 0.460327 0.469398 -0.0090715 2.9342e-01 0.23189032 insignificant 1.0000e+00 1.00000 insignificant 3.2669e-01 0.2961325 insignificant 1.0000e+00 1 insignificant -0.0078998 0.89747775 insignificant 1.00000 insignificant 0.492607 0.736881 -0.22055402 7 0.408923 0.588869 -0.1799456 9.3777e-01 1.2444e-14 hypomethylated 1.0000e+00 1.2444e-11 hypomethylated 9.9288e-01 2.4387e-06 hypomethylated 1.0000e+00 0.0024387 hypomethylated -0.2301342 7.0633e-03 weaklyHypometh 1.7658e-01 insignificant 0.493314 0.490537 0.02939315 7 0.490044 0.469398 0.02064604 1.0602e-01 0.6144070 insignificant 1.0000e+00 1 insignificant 1.2327e-01 0.583794 insignificant 1.0000e+00 1 insignificant 0.0154074 0.80567929 insignificant 1.00000 insignificant 0.738519 0.490537 0.2507643 7 0.757117 0.469398 0.2877189 2.5537e-08 9.9966e-01 hypermethylated 2.5537e-05 1.0000e+00 hypermethylated 1.0216e-05 9.9974e-01 hypermethylated 0.010216 1.0000e+00 hypermethylated 0.2455416 1.1137e-02 weaklyHypermeth 0.336670 insignificant chr11 72775650 72776650 39125 RELT ENSG00000054967 0.7847602 163 6 0.500000 91 6 0.6267411 57 6 0.7440868 134 6 0.700000 22 3 0.645034 149 6 0.734694 22 2 0.671945 100 6 0.6226852 55 6 0.8051282 47 6 0.835661 146 6 0.481481 15 1 0.6775488 95 3 1.000000 8 0 0.650427 46 3 0.444444 10 1 0.3333333 18 1 0.530618 135 6 0.620621 109 6 0.526565 82 6 0.769666 86 6 0.404994 80 5 0.8383987 67 6 0.5702381 47 4 0.8433097 188 6 0.6845859 105 6 0.752056 73 4 0.366667 12 2 0.644625 86 6 0.610258 134 6 0.729261 139 6 0.8586993 142 6 0.7567783 85 6 0.7438672 117 6 0.666667 116 3 0.8345058 108 6 0.626136 36 4 0.686237 109 6 0.332118 104 6 0.454880 134 6 0.406696 88 6 0.247904 81 3 0.604408 99 6 0.694291 0.473684 0.4304499 0.6058815 0.461842 0.701038 0.695489 0.527101 0.6280336 0.7980657 0.828892 0.470230 0.555791 0.752545 0.618556 0.389821 0.2538557 0.518812 0.392878 0.521432 0.811570 0.260493 0.7836816 0.674311 0.713012 0.5510215 0.618025 0.391273 0.4594224 0.6177361 0.598190 0.7285606 0.7999979 0.6626225 0.767841 0.747430 0.958254 0.762598 0.3061772 0.386835 0.2401786 0.3040798 0.5009201 1 0.642428 0.679034 -0.0348281 6 0.603571 0.665574 -0.0620030 0.943328 1.4412e-01 insignificant 1 1.000000 insignificant 0.92868 3.0165e-01 insignificant 1 1.000000 insignificant -2.5941e-02 0.6593290 lowCoverage 1 lowCoverage 0.645097 0.788091 -0.13915810 6 0.703571 0.585530 0.118041 9.2664e-01 9.0676e-03 weaklyHypometh 1.0000e+00 7.5563e-01 insignificant 3.9292e-01 1.6873e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.072243 1.3193e-01 lowCoverage 1.0000e+00 lowCoverage 0.642428 0.379447 0.2541887 6 0.603571 0.452515 0.1510563 1.1658e-09 0.99670062 hypermethylated 2.3316e-07 1.00000 hypermethylated 1.1662e-06 0.9994089 hypermethylated 1.6660e-04 1 hypermethylated 0.2375876 0.01121995 lowCoverage 0.62333 lowCoverage 0.679931 0.790861 -0.10605947 6 0.713037 0.669177 0.0438601 5.0706e-01 7.1271e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 8.3572e-01 3.5698e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant -0.0463020 4.2006e-01 insignificant 1.0000e+00 insignificant 0.679034 0.379447 0.29159825 6 0.665574 0.452515 0.21305926 8.9229e-10 0.9989843 hypermethylated 1.2747e-07 1 hypermethylated 7.0045e-07 0.999854 hypermethylated 1.4009e-04 1 hypermethylated 0.2635287 0.00703189 weaklyHypermeth 0.66393 insignificant 0.790861 0.380198 0.4075124 6 0.669177 0.517160 0.1520172 1.4922e-07 9.9999e-01 hypermethylated 4.9741e-05 1.0000e+00 hypermethylated 2.1097e-05 9.9998e-01 hypermethylated 0.010548 1.0000e+00 hypermethylated 0.3098307 3.6841e-03 weaklyHypermeth 0.136446 insignificant chr11 76140650 76141650 39225 ENSG00000204529 0.6992287 404 7 0.710941 252 8 0.7196589 231 9 0.7866176 450 7 0.685784 86 8 0.750578 323 7 0.782301 230 9 0.800676 205 7 0.7514553 86 8 0.6992719 176 8 0.804785 233 9 0.819921 87 9 0.7454140 278 9 NA 0 0 0.808923 237 8 0.780507 94 8 0.7291433 109 9 0.350384 540 7 0.908569 272 8 0.733283 280 7 0.781526 58 7 0.520471 169 7 0.6810312 200 8 0.6360229 57 7 0.7239234 146 7 0.7103838 530 8 0.764983 72 8 0.542857 13 1 0.672257 347 8 0.737963 477 9 0.707131 340 8 0.8553146 323 8 0.1140519 414 8 0.0985755 273 8 0.000000 20 1 0.0312500 149 7 0.166667 50 8 0.093579 425 9 0.707073 541 8 0.657509 412 8 0.558234 389 7 0.437041 361 7 0.664189 459 7 0.658689 0.724432 0.8034303 0.7251214 0.712655 0.810930 0.827191 0.781330 0.7389006 0.7723033 0.842436 0.819930 0.807497 NA 0.775955 0.800754 0.7049267 0.395657 0.922226 0.721719 0.852783 0.528348 0.7982157 0.672539 0.833687 0.7796232 0.781390 0.494150 0.8176174 0.8516103 0.777310 0.8768973 0.0392238 0.0559400 NA 0.047338 0.108969 0.051750 0.7091299 0.640566 0.4790126 0.4283433 0.6794798 6 0.720971 0.786969 -0.0643619 8 0.709317 0.733563 -0.0242455 0.467270 5.5329e-03 weaklyHypometh 1 0.691610 insignificant 0.37730 2.5475e-01 insignificant 1 1.000000 insignificant 4.5903e-02 0.2263132 insignificant 1 insignificant 0.720971 0.060105 0.66083383 8 0.709317 0.113505 0.595812 5.8146e-54 1.0000e+00 hypermethylated 1.9382e-51 1.0000e+00 hypermethylated 4.1919e-20 1.0000e+00 hypermethylated 1.3973e-17 1.0000e+00 hypermethylated 0.656371 2.3731e-12 hypermethylated 7.9104e-10 hypermethylated 0.725061 0.599907 0.1222082 7 0.732765 0.623687 0.1090776 6.7119e-04 0.99993692 weaklyHypermeth 3.9482e-02 1.00000 weaklyHypermeth 6.5073e-07 0.9999011 weaklyHypermeth 1.3015e-04 1 weaklyHypermeth 0.1355826 0.04560741 weaklyHypermeth 1.00000 insignificant 0.786969 0.060105 0.72631581 8 0.733563 0.113505 0.6200575 3.2321e-59 1.0000e+00 hypermethylated 1.6161e-56 1.0000e+00 hypermethylated 1.8802e-13 1.0000e+00 hypermethylated 4.7006e-11 1.0000000 hypermethylated 0.6104682 5.3245e-11 hypermethylated 1.8255e-08 hypermethylated 0.789649 0.599907 0.19475084 7 0.760443 0.623687 0.13675633 1.4789e-10 0.9931697 weaklyHypermeth 2.4648e-08 1 weaklyHypermeth 1.1721e-05 0.971498 weaklyHypermeth 1.6744e-03 1 weaklyHypermeth 0.0896795 0.15334943 insignificant 1.00000 insignificant 0.059136 0.599907 -0.5507171 7 0.106860 0.623687 -0.5168268 1.0000e+00 3.3614e-27 hypomethylated 1.0000e+00 1.6807e-24 hypomethylated 1.0000e+00 2.9847e-10 hypomethylated 1.000000 9.9491e-08 hypomethylated -0.5207888 7.5372e-05 hypomethylated 0.015898 hypomethylated chr11 76141250 76142250 39226 ENSG00000204529 0.6465971 422 8 0.708142 254 8 0.7641617 217 8 0.7182782 481 8 0.765625 61 6 0.815554 330 8 0.817589 190 8 0.707011 202 8 0.7583337 86 8 0.7797365 177 8 0.831777 221 8 0.757233 70 8 0.7746202 279 8 NA 0 0 0.819129 235 8 0.806061 63 6 0.6863636 76 8 0.401520 583 8 0.917944 278 8 0.731193 294 8 0.858383 49 6 0.495530 192 8 0.7783354 202 8 0.7051091 53 6 0.8094498 164 8 0.7807293 526 8 0.802570 77 8 0.500000 6 0 0.730315 350 8 0.842708 472 8 0.780409 346 8 0.8893122 336 8 0.0321545 418 8 0.0427157 275 8 0.000000 39 2 0.0312500 170 8 0.087500 54 8 0.041387 436 8 0.664062 566 8 0.585600 437 8 0.488234 413 8 0.405138 383 8 0.620228 475 8 0.650688 0.715764 0.7926927 0.7191546 0.736674 0.808769 0.824918 0.732383 0.7508405 0.7725036 0.830934 0.786842 0.790233 NA 0.794672 0.790062 0.6788129 0.398402 0.918828 0.722906 0.844025 0.510006 0.7864206 0.679654 0.824779 0.7822462 0.783943 0.534692 0.7811156 0.8456987 0.782506 0.8836354 0.0329656 0.0492940 0.052806 0.041322 0.097107 0.047228 0.6773592 0.608157 0.4736356 0.4062958 0.6485151 6 0.717415 0.791922 -0.0742233 8 0.714208 0.780466 -0.0662576 0.999887 1.6778e-03 weaklyHypometh 1 0.308316 insignificant 0.98722 1.0016e-01 insignificant 1 1.000000 insignificant -7.6296e-06 0.9998628 insignificant 1 insignificant 0.717415 0.040948 0.67468994 8 0.714208 0.037781 0.676427 4.1503e-58 1.0000e+00 hypermethylated 4.1503e-55 1.0000e+00 hypermethylated 1.0436e-20 1.0000e+00 hypermethylated 5.2180e-18 1.0000e+00 hypermethylated 0.708562 9.1520e-19 hypermethylated 4.5760e-16 hypermethylated 0.717415 0.582674 0.1353959 8 0.714208 0.565533 0.1486749 4.2232e-06 0.99999844 weaklyHypermeth 4.6924e-04 1.00000 weaklyHypermeth 7.5208e-09 1.0000000 weaklyHypermeth 3.7604e-06 1 weaklyHypermeth 0.1950774 0.00929476 weaklyHypermeth 0.58498 insignificant 0.791922 0.040948 0.74859148 8 0.780466 0.037781 0.7426844 4.4689e-64 1.0000e+00 hypermethylated 4.4689e-61 1.0000e+00 hypermethylated 1.5333e-15 1.0000e+00 hypermethylated 7.6667e-13 1.0000000 hypermethylated 0.7085697 1.0908e-10 hypermethylated 2.7269e-08 hypermethylated 0.791922 0.582674 0.20976415 8 0.780466 0.565533 0.21493242 8.4424e-13 1.0000000 hypermethylated 2.1106e-10 1 hypermethylated 1.5764e-07 1.000000 hypermethylated 3.9409e-05 1 hypermethylated 0.1950850 0.00938191 weaklyHypermeth 0.74066 insignificant 0.040948 0.582674 -0.5347879 8 0.037781 0.565533 -0.5277519 1.0000e+00 4.7192e-31 hypomethylated 1.0000e+00 4.7192e-28 hypomethylated 1.0000e+00 9.9434e-12 hypomethylated 1.000000 4.9717e-09 hypomethylated -0.5134847 2.3775e-04 hypomethylated 0.029719 hypomethylated chr11 85590850 85591850 39415 ENSG00000200877 0.4378361 223 10 0.498457 155 6 0.3233766 165 6 0.5362030 154 9 0.490591 99 7 0.508192 208 9 0.433855 180 7 0.523221 144 7 0.5537609 120 6 0.3411111 86 6 0.435684 222 9 0.595467 91 6 0.4095719 95 6 0.405071 71 6 0.191654 133 6 0.354545 42 2 0.2654545 25 2 0.733239 112 3 0.561538 84 7 0.408113 131 9 0.332586 69 6 0.581585 69 5 0.5118490 173 9 0.5833333 56 6 0.3684641 59 2 0.5538306 155 9 0.321783 230 6 0.345055 66 6 0.590201 127 6 0.264083 138 6 0.523377 122 9 0.4324792 314 9 0.2874405 171 9 0.4085165 96 6 0.694444 43 2 0.2857143 21 0 0.237082 133 7 0.507545 119 6 0.461172 237 9 0.461897 212 9 0.503954 122 6 0.519216 95 4 0.373944 163 6 0.569457 0.279827 0.6094948 0.4989235 0.454082 0.497742 0.475819 0.505595 0.4742797 0.5367547 0.416912 0.477147 0.556377 0.485482 0.380506 0.493348 0.4463918 0.631136 0.640244 0.427700 0.234027 0.674250 0.5128958 0.505589 0.594612 0.6062070 0.107873 0.560685 0.4985119 0.4989648 0.664286 0.2281757 0.3058580 0.5790729 0.405385 0.640244 0.424528 0.521790 0.5689345 0.546919 0.5987558 0.6269883 0.5758249 2 0.440945 0.388466 0.0073539 6 0.533288 0.479665 0.0536230 0.311908 8.9947e-01 insignificant 1 1.000000 insignificant 0.88921 5.9514e-01 insignificant 1 1.000000 insignificant -3.7173e-04 0.9933579 insignificant 1 insignificant 0.440945 0.420240 0.04756866 6 0.533288 0.383025 0.150263 9.5298e-03 2.9043e-01 weaklyHypermeth 1.3032e-01 1.0000e+00 insignificant 6.8574e-02 7.4918e-01 insignificant 9.6583e-01 1.0000e+00 insignificant 0.046890 5.5801e-01 insignificant 1.0000e+00 insignificant 0.440945 0.575392 -0.0633341 6 0.533288 0.469109 0.0641797 4.9856e-01 0.00033720 weaklyHypometh 1.0000e+00 0.33720 insignificant 5.8129e-01 0.0397271 weaklyHypometh 1.0000e+00 1 insignificant -0.0136894 0.71944234 insignificant 1.00000 insignificant 0.388466 0.420240 0.04236803 6 0.479665 0.383025 0.0966402 7.0910e-02 6.8955e-01 insignificant 7.8789e-01 1.0000e+00 insignificant 2.4894e-01 9.8432e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0472618 5.6645e-01 insignificant 1.0000e+00 insignificant 0.388466 0.575392 -0.06728856 9 0.479665 0.469109 0.01055669 8.9407e-01 0.0185645 weaklyHypometh 1.0000e+00 1 insignificant 8.6365e-01 0.518101 insignificant 1.0000e+00 1 insignificant -0.0133177 0.76008445 insignificant 1.00000 insignificant 0.420240 0.575392 -0.1160732 6 0.383025 0.469109 -0.0860835 9.6640e-01 9.3960e-03 weaklyHypometh 1.0000e+00 1.6200e-01 insignificant 9.9421e-01 2.6184e-01 insignificant 1.000000 1.0000e+00 insignificant -0.0605794 4.5019e-01 insignificant 1.000000 insignificant chr11 86305250 86306250 39450 ENSG00000197882 0.5645833 69 8 0.550267 86 8 0.5737374 64 8 0.6012346 92 8 0.712500 61 8 0.655070 92 8 0.577652 60 8 0.654075 108 8 0.5558036 61 8 0.5312500 29 0 0.624086 229 8 0.750000 11 0 0.6515152 65 5 0.762153 68 8 0.545833 68 8 0.500000 12 0 0.5000000 5 0 0.709087 105 9 0.555556 65 8 0.604167 45 3 0.364583 25 0 0.700000 10 0 0.6625000 63 8 0.4946429 49 8 0.5416667 60 3 0.5090909 80 8 0.697290 70 5 0.458333 21 0 0.736337 102 8 0.644396 139 8 0.558569 125 8 0.4893516 99 8 0.6052288 102 8 0.5145202 76 8 0.530557 132 8 0.6666667 18 3 0.455128 87 8 0.612179 82 8 0.584127 72 8 0.722222 107 8 0.696429 68 8 0.537500 40 3 0.563889 75 8 0.564583 0.506618 0.5204545 0.5513889 0.712500 0.655070 0.577652 0.654075 0.5558036 0.5312500 0.624086 0.750000 0.732955 0.762153 0.545833 0.578950 0.5789503 0.736359 0.555556 0.604167 0.364583 0.658902 0.6625000 0.494643 0.541667 0.6363636 0.784452 0.458333 0.7363366 0.5999458 0.559699 0.5478584 0.6315359 0.5145202 0.530557 0.575568 0.512019 0.563702 0.5321429 0.687500 0.6964286 0.5375000 0.5638889 0 0.614337 0.599762 0.0135849 8 0.701400 0.465450 0.2359505 0.475125 9.5642e-01 insignificant 1 1.000000 insignificant 0.34095 9.9866e-01 insignificant 1 1.000000 insignificant 3.7532e-02 0.3326677 insignificant 1 insignificant 0.614060 0.567404 0.05157134 8 0.676517 0.538565 0.137952 8.7760e-02 9.9838e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6184e-02 9.9981e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.044882 2.4838e-01 insignificant 1.0000e+00 insignificant 0.616052 0.640884 -0.0255359 8 0.655109 0.672128 -0.0170190 8.0795e-01 0.17795279 insignificant 1.0000e+00 1.00000 insignificant 8.3859e-01 0.3570914 insignificant 1.0000e+00 1 insignificant -0.0119048 0.78170411 insignificant 1.00000 insignificant 0.600476 0.567404 0.03847251 8 0.504237 0.538565 -0.0343274 5.1336e-01 9.7857e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.4288e-01 9.9359e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0073501 8.7505e-01 insignificant 1.0000e+00 insignificant 0.604317 0.640884 -0.03453604 8 0.616761 0.672128 -0.05536736 9.5721e-01 0.1146172 insignificant 1.0000e+00 1 insignificant 9.4867e-01 0.181178 insignificant 1.0000e+00 1 insignificant -0.0494366 0.34354008 insignificant 1.00000 insignificant 0.568826 0.640884 -0.0686206 8 0.606975 0.672128 -0.0651531 9.9801e-01 6.5507e-03 weaklyHypometh 1.0000e+00 1.2131e-01 insignificant 9.9823e-01 4.3627e-02 weaklyHypometh 1.000000 6.9351e-01 insignificant -0.0567867 2.7609e-01 insignificant 1.000000 insignificant chr11 86386950 86387950 39460 FZD4 ENSG00000174804 0.7194444 148 6 0.747765 133 6 0.7004274 57 4 0.8156011 110 5 0.691270 44 5 0.761341 180 6 0.776838 67 6 0.820113 73 6 0.8164683 44 6 0.7373016 44 5 0.740821 130 6 0.858333 19 3 0.7708720 56 6 0.746212 39 5 0.845238 36 5 0.791667 16 1 0.6666667 7 0 0.746390 184 6 0.856303 65 4 0.777267 145 6 0.684740 49 4 0.495152 26 3 0.7664372 82 5 0.8273810 56 4 0.7857143 70 5 0.7991522 119 6 0.692857 37 5 0.900000 23 3 0.838666 84 5 0.832030 112 6 0.843828 87 6 0.8609045 149 6 0.7451495 116 6 0.7061224 69 5 0.768823 102 6 0.6488095 25 4 0.764838 67 6 0.764604 98 6 0.753740 119 6 0.759702 126 5 0.841724 111 5 0.935635 77 5 0.821296 128 6 0.734699 0.705167 0.6888009 0.8008367 0.618873 0.743244 0.746107 0.813385 0.8270308 0.7139706 0.747526 0.778849 0.741024 0.752340 0.825980 0.834559 0.7198645 0.738062 0.856382 0.788177 0.702172 0.524499 0.7291533 0.788113 0.778245 0.7465742 0.765756 0.911765 0.8286370 0.8275976 0.828477 0.8373491 0.6856697 0.6292017 0.769194 0.679097 0.736927 0.737262 0.7341381 0.751102 0.8320467 0.9307773 0.8106209 3 0.765185 0.782755 -0.0203489 6 0.795883 0.789409 0.0064735 0.762347 1.5027e-01 insignificant 1 1.000000 insignificant 0.85413 8.5116e-02 insignificant 1 1.000000 insignificant -7.9215e-03 0.8182577 lowCoverage 1 lowCoverage 0.765185 0.709474 0.05418918 6 0.795883 0.757267 0.038615 3.3269e-02 9.7941e-01 weaklyHypermeth 4.1586e-01 1.0000e+00 insignificant 2.6392e-01 9.4127e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.036259 1.4604e-01 lowCoverage 1.0000e+00 lowCoverage 0.764595 0.796791 -0.0378369 5 0.761863 0.811489 -0.0496261 9.7629e-01 0.00715338 weaklyHypometh 1.0000e+00 0.80839 insignificant 9.8617e-01 0.0108183 weaklyHypometh 1.0000e+00 1 insignificant -0.0531024 0.19037439 lowCoverage 1.00000 lowCoverage 0.782998 0.710692 0.07203921 6 0.815733 0.787609 0.0281241 2.5132e-02 9.9550e-01 weaklyHypermeth 3.1027e-01 1.0000e+00 insignificant 6.8829e-02 9.9683e-01 insignificant 8.9388e-01 1.0000000 insignificant 0.0441806 2.5063e-01 lowCoverage 1.0000e+00 lowCoverage 0.782658 0.796791 -0.02276225 5 0.787644 0.811489 -0.02384525 9.2140e-01 0.2435464 insignificant 1.0000e+00 1 insignificant 9.4721e-01 0.255971 insignificant 1.0000e+00 1 insignificant -0.0451809 0.34380730 lowCoverage 1.00000 lowCoverage 0.708861 0.796791 -0.0970406 5 0.716812 0.811489 -0.0946774 9.9971e-01 1.6153e-03 weaklyHypometh 1.0000e+00 3.6711e-02 weaklyHypometh 9.9860e-01 5.1939e-03 weaklyHypometh 1.000000 1.5739e-01 insignificant -0.0893615 5.4581e-02 insignificant 0.957568 insignificant chr11 86393450 86394450 39461 FZD4 ENSG00000174804 0.8327416 240 6 0.733053 133 6 0.5300094 119 6 0.8580353 156 6 0.775641 53 2 0.773867 143 6 0.696050 61 4 0.778353 142 6 0.7380208 39 2 0.8363095 50 6 0.732534 201 6 0.642857 41 1 0.7345384 116 6 0.837607 52 2 0.799997 95 6 0.928571 21 1 0.8800000 9 1 0.672975 195 6 0.816010 102 6 0.705704 105 6 0.858333 29 5 0.833333 12 0 0.6589090 187 6 0.6518519 38 2 0.6388889 34 6 0.6580289 174 6 0.746272 44 5 0.716667 18 2 0.677400 166 6 0.854187 119 2 0.848748 152 6 0.9289382 99 5 0.7137737 89 2 0.7265886 77 6 0.848554 108 6 0.5416667 14 0 0.623401 77 6 0.721892 148 6 0.697917 195 6 0.751606 200 6 0.843413 185 6 0.792358 192 6 0.793040 190 6 0.743813 0.692936 0.5641353 0.8037613 0.774725 0.762249 0.799020 0.748519 0.8041667 0.8129252 0.733954 0.595238 0.732927 0.831502 0.746465 0.897959 0.8388440 0.829293 0.747805 0.753854 0.866667 0.795824 0.6632240 0.633333 0.663492 0.8058154 0.754621 0.753968 0.6857224 0.8153908 0.818908 0.8878293 0.6955599 0.7150024 0.793815 0.511905 0.644396 0.725057 0.7083333 0.866397 0.8039125 0.7860755 0.7834525 0 0.736131 0.748598 -0.0051114 6 0.752390 0.667463 0.0849269 0.873014 6.2168e-01 insignificant 1 1.000000 insignificant 0.52227 8.9366e-01 insignificant 1 1.000000 insignificant 9.1807e-03 0.8011464 lowCoverage 1 lowCoverage 0.736893 0.713450 0.03507827 6 0.742570 0.783180 -0.040610 1.7764e-01 9.4923e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.5254e-02 9.8540e-01 weaklyHypermeth 5.6861e-01 1.0000e+00 insignificant 0.069164 1.8350e-01 lowCoverage 1.0000e+00 lowCoverage 0.736004 0.770270 -0.0464495 6 0.724877 0.729646 -0.0047689 9.8915e-01 0.08492929 insignificant 1.0000e+00 1.00000 insignificant 8.9181e-01 0.4609730 insignificant 1.0000e+00 1 insignificant -0.0105231 0.74661974 lowCoverage 1.00000 lowCoverage 0.747408 0.713450 0.03710092 6 0.709328 0.783180 -0.0738520 3.7526e-01 7.1426e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.7532e-01 9.7828e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0599838 2.7429e-01 lowCoverage 1.0000e+00 lowCoverage 0.749298 0.770270 -0.03878823 6 0.741625 0.729646 0.01197898 8.1851e-01 0.3807880 insignificant 1.0000e+00 1 insignificant 7.4593e-01 0.533320 insignificant 1.0000e+00 1 insignificant -0.0197038 0.61531384 lowCoverage 1.00000 lowCoverage 0.713450 0.770355 -0.0809696 6 0.783180 0.727102 0.0560783 9.9998e-01 8.2615e-03 weaklyHypometh 1.0000e+00 1.4494e-01 insignificant 9.9915e-01 2.7349e-02 weaklyHypometh 1.000000 5.2595e-01 insignificant -0.0796876 1.4358e-01 lowCoverage 1.000000 lowCoverage chr11 87689850 87690850 39480 RAB38 ENSG00000123892 0.6802600 213 5 0.512980 123 5 0.5400159 100 5 0.6192369 79 5 0.656623 43 5 0.622835 292 5 0.525575 135 5 0.673333 84 5 0.5371429 93 5 0.7020131 110 5 0.725970 198 5 0.621717 77 5 0.7291117 94 5 NA 0 0 0.664828 103 5 0.626667 75 5 0.6443223 65 5 0.765496 111 5 0.718413 155 5 0.608556 256 5 0.577778 38 4 0.663993 69 5 0.6888421 113 5 0.6886886 83 5 0.6833333 48 5 0.6786232 167 5 0.686993 61 5 0.723413 44 5 0.655222 86 5 0.668576 203 5 0.663579 172 5 0.6663683 256 5 0.5751634 93 5 0.6273643 100 5 0.521125 144 5 0.5868687 48 5 0.635223 66 5 0.609933 183 5 0.712362 173 5 0.716070 158 5 0.704600 173 5 0.736190 166 5 0.734250 159 5 0.683384 0.516140 0.5438204 0.6171434 0.655971 0.624705 0.527086 0.672388 0.5409226 0.7053482 0.726723 0.626568 0.732456 NA 0.666649 0.631510 0.6475504 0.765154 0.724339 0.609481 0.578668 0.665962 0.6952385 0.695508 0.683594 0.6827658 0.683293 0.717270 0.6573781 0.6695080 0.667107 0.6671996 0.5783931 0.6323795 0.523410 0.575955 0.639239 0.612815 0.7133463 0.716933 0.7107535 0.7373977 0.7332640 5 0.645054 0.689552 -0.0321107 5 0.637209 0.668520 -0.0313106 0.987362 1.1697e-01 insignificant 1 1.000000 insignificant 0.94136 1.2201e-01 insignificant 1 1.000000 insignificant -2.9656e-02 0.1400263 lowCoverage 1 lowCoverage 0.645054 0.613565 0.05307583 5 0.637209 0.586745 0.050464 2.3926e-03 9.5205e-01 weaklyHypermeth 3.7978e-02 1.0000e+00 weaklyHypermeth 2.5457e-02 9.8476e-01 weaklyHypermeth 4.3147e-01 1.0000e+00 insignificant 0.048182 6.2458e-02 lowCoverage 1.0000e+00 lowCoverage 0.645054 0.689988 -0.0834527 5 0.637209 0.720350 -0.0831409 9.9806e-01 0.00232376 weaklyHypometh 1.0000e+00 0.49585 insignificant 9.9911e-01 0.0022696 weaklyHypometh 1.0000e+00 1 insignificant -0.0799001 0.00020883 lowCoverage 0.10442 lowCoverage 0.689552 0.613565 0.08580935 5 0.668520 0.586745 0.0817744 1.3473e-04 9.9776e-01 weaklyHypermeth 2.7497e-03 1.0000e+00 weaklyHypermeth 1.0366e-03 9.8983e-01 weaklyHypermeth 2.5929e-02 1.0000000 weaklyHypermeth 0.0778379 3.8309e-03 lowCoverage 1.0810e-01 lowCoverage 0.689552 0.689988 -0.05711768 5 0.668520 0.720350 -0.05183036 9.7939e-01 0.0197946 weaklyHypometh 1.0000e+00 1 insignificant 9.9367e-01 0.064034 insignificant 1.0000e+00 1 insignificant -0.0502439 0.00063313 lowCoverage 0.15828 lowCoverage 0.613565 0.689988 -0.1461121 5 0.586745 0.720350 -0.1336048 9.9902e-01 5.9578e-06 weaklyHypometh 1.0000e+00 2.3831e-04 weaklyHypometh 9.9948e-01 5.3123e-05 weaklyHypometh 1.000000 4.4269e-03 weaklyHypometh -0.1280817 3.3697e-04 weaklyHypometh 0.037441 weaklyHypometh chr11 94113850 94114850 39582 PIWIL4 ENSG00000134627 0.0154565 412 7 0.000000 149 9 0.0123457 54 7 0.0049454 328 7 0.000000 75 7 0.020634 284 7 0.171007 82 7 0.020979 75 7 0.0158730 40 4 0.0238095 70 4 0.199848 123 7 0.031746 38 4 0.0000000 39 4 0.062500 31 4 0.150000 51 4 0.120370 61 4 1.0000000 2 0 0.208633 578 7 0.000000 92 7 0.011000 162 7 0.019284 104 7 0.000000 109 4 0.2058824 118 7 0.0222222 34 3 0.0096505 296 7 0.0029762 167 7 0.023966 75 5 0.022222 23 1 0.043706 76 7 0.005848 101 7 0.015385 109 9 0.0126050 212 7 0.0000000 90 9 0.1196581 129 7 0.202020 69 9 0.0000000 137 7 0.083333 47 3 0.000000 155 7 0.005848 332 7 0.122742 168 7 0.122051 228 7 0.000000 98 7 0.146825 232 7 0.014559 0.000000 0.0246032 0.0109504 0.000000 0.019667 0.059970 0.037163 0.0246032 0.0369048 0.038734 0.049206 0.000000 0.110714 0.021429 0.100595 0.4524130 0.014389 0.000000 0.021921 0.017208 0.000000 0.0130252 0.000000 0.010315 0.0092262 0.037148 0.044286 0.0755037 0.0018797 0.000000 0.0195378 0.0000000 0.0027473 0.049206 0.000000 0.113690 0.000000 0.0018797 0.023179 0.0090458 0.0000000 0.0019841 4 0.024096 0.016174 0.0068114 7 0.104906 0.015266 0.0896404 0.948446 9.9922e-01 insignificant 1 1.000000 insignificant 0.50046 9.9988e-01 insignificant 1 1.000000 insignificant 7.1478e-02 0.1855978 insignificant 1 insignificant 0.023443 0.014354 0.01096678 7 0.060262 0.236436 -0.176174 5.8332e-01 9.9960e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.0459e-01 9.6846e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.035955 5.5713e-01 insignificant 1.0000e+00 insignificant 0.023792 0.013233 0.0115885 7 0.091672 0.168276 -0.0766044 8.2593e-01 0.47579132 insignificant 1.0000e+00 1.00000 insignificant 5.5196e-01 0.6513383 insignificant 1.0000e+00 1 insignificant 0.0239642 0.68861106 insignificant 1.00000 insignificant 0.016231 0.014354 0.00012019 7 0.019963 0.236436 -0.2164725 6.5238e-01 9.9992e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.6985e-01 8.8027e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0355230 3.7569e-01 insignificant 1.0000e+00 insignificant 0.016209 0.013233 0.00058764 7 0.018537 0.168276 -0.14973920 8.4216e-01 0.9482984 insignificant 1.0000e+00 1 insignificant 9.5727e-01 0.700341 insignificant 1.0000e+00 1 insignificant -0.0475143 0.22747475 insignificant 1.00000 insignificant 0.014354 0.012299 -0.0013286 7 0.236436 0.104298 0.1321380 9.9973e-01 8.7164e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9153e-01 8.8159e-01 insignificant 1.000000 1.0000e+00 insignificant -0.0119913 8.0202e-01 insignificant 1.000000 insignificant chr11 94480050 94481050 39599 ENDOD1 ENSG00000149218 0.7927837 726 17 0.592112 274 17 0.4568241 312 17 0.8472061 363 17 0.650723 136 9 0.652965 739 17 0.391550 308 15 0.622007 253 17 0.6722386 252 17 0.6998893 204 13 0.651475 555 17 0.619489 140 13 0.6254630 262 17 0.613889 24 1 0.704710 249 15 0.626674 131 9 0.5743108 157 11 0.723379 356 17 0.718526 316 17 0.814961 561 17 0.671788 163 8 0.648804 206 17 0.8002725 293 17 0.6648126 210 15 0.7591270 124 12 0.7540943 432 17 0.626749 221 13 0.676335 121 6 0.634130 264 16 0.782688 468 17 0.821775 334 13 0.7075365 752 17 0.6172078 187 15 0.7387529 227 17 0.749720 192 11 0.7506877 144 10 0.735563 272 15 0.778151 377 17 0.788956 552 17 0.800294 614 17 0.691909 538 17 0.697929 379 17 0.752458 531 17 0.806313 0.616214 0.4775194 0.8267970 0.640822 0.775575 0.477982 0.601693 0.6952332 0.7434947 0.715681 0.610514 0.698336 0.638597 0.718863 0.686379 0.6120630 0.761245 0.748087 0.813682 0.750651 0.661298 0.8259660 0.674452 0.771813 0.7770169 0.698943 0.627039 0.6805312 0.7662436 0.836204 0.7082264 0.6419262 0.7503229 0.767917 0.729260 0.727488 0.790092 0.8206433 0.774441 0.7046509 0.7564206 0.7713642 9 0.709243 0.732218 -0.0253479 17 0.679351 0.721627 -0.0422760 0.997982 5.6197e-02 insignificant 1 1.000000 insignificant 0.99999 4.6630e-03 weaklyHypometh 1 1.000000 insignificant -5.9784e-02 0.0641264 insignificant 1 insignificant 0.709350 0.736240 -0.02794566 17 0.690724 0.715733 -0.025009 1.3768e-01 2.4904e-03 weaklyHypometh 1.0000e+00 3.5577e-01 insignificant 8.9669e-01 4.7320e-04 weaklyHypometh 1.0000e+00 9.4641e-02 weaklyHypometh -0.075788 3.6478e-02 weaklyHypometh 6.5082e-01 insignificant 0.709238 0.773823 -0.0518349 17 0.677604 0.781964 -0.1043603 9.9947e-01 0.02773143 weaklyHypometh 1.0000e+00 1.00000 insignificant 9.9999e-01 0.0028457 weaklyHypometh 1.0000e+00 1 insignificant -0.0937502 0.01252279 weaklyHypometh 0.65909 insignificant 0.732178 0.736240 -0.00435949 17 0.721528 0.715733 0.0057943 3.0067e-03 3.8974e-02 weaklyHypometh 4.8495e-02 1.0000e+00 weaklyHypometh 5.8964e-02 7.9752e-02 insignificant 7.8618e-01 1.0000000 insignificant -0.0160046 6.0735e-01 insignificant 1.0000e+00 insignificant 0.732422 0.773910 -0.02198098 17 0.733532 0.792347 -0.05881545 8.7052e-01 0.1078600 insignificant 1.0000e+00 1 insignificant 8.4186e-01 0.290278 insignificant 1.0000e+00 1 insignificant -0.0339664 0.28116839 insignificant 1.00000 insignificant 0.736578 0.773563 -0.0144828 17 0.728423 0.743487 -0.0150641 2.3841e-01 6.0542e-03 weaklyHypometh 1.0000e+00 1.1423e-01 insignificant 1.6335e-01 2.0010e-01 insignificant 1.000000 1.0000e+00 insignificant -0.0179618 5.9037e-01 insignificant 1.000000 insignificant chr11 97602150 97603150 39708 ENSG00000216073 0.8208106 276 9 0.776533 150 9 0.6560317 90 7 0.8314503 203 9 0.747293 86 9 0.887057 323 9 0.665343 124 9 0.767251 144 8 0.7036741 102 8 0.7726313 79 7 0.883618 317 9 0.857323 40 3 0.8324719 148 9 0.821905 60 5 0.836299 149 9 0.899531 77 5 0.7678571 40 4 0.833875 226 9 0.793887 172 9 0.879329 280 9 0.739683 26 2 0.875624 103 9 0.8593629 126 9 0.8121693 64 5 0.8425926 59 8 0.8196700 175 9 0.735882 67 6 0.706349 37 3 0.935903 130 7 0.810601 188 9 0.845406 183 9 0.8324170 356 9 0.6757444 152 8 0.5407170 123 9 0.594402 183 9 0.8026455 62 5 0.801997 86 5 0.810989 190 9 0.727518 300 9 0.873993 311 9 0.767403 232 9 0.758684 246 9 0.848468 230 9 0.826254 0.788594 0.6225990 0.8824852 0.825725 0.878385 0.751572 0.888749 0.7667706 0.8434756 0.895165 0.889788 0.948661 0.892644 0.892326 0.917372 0.8476460 0.865241 0.848598 0.914671 0.834488 0.898601 0.8998956 0.898885 0.887205 0.8740299 0.840603 0.743927 0.9319296 0.8689502 0.902644 0.8448485 0.6884197 0.6505973 0.504444 0.806758 0.800861 0.730976 0.8725157 0.899512 0.8507687 0.8386215 0.8715016 3 0.833765 0.850727 -0.0125507 9 0.831160 0.760822 0.0703385 0.993639 7.5011e-01 insignificant 1 1.000000 insignificant 0.99202 7.7163e-01 insignificant 1 1.000000 insignificant -1.6263e-02 0.5109924 insignificant 1 insignificant 0.833928 0.672111 0.16255003 9 0.843814 0.706369 0.137444 2.6202e-09 9.9997e-01 weaklyHypermeth 6.7186e-08 1.0000e+00 weaklyHypermeth 1.7766e-03 9.9946e-01 weaklyHypermeth 4.0377e-02 1.0000e+00 weaklyHypermeth 0.097293 1.0364e-01 insignificant 1.0000e+00 insignificant 0.833604 0.840030 -0.0015220 9 0.785113 0.799775 -0.0146616 6.5037e-01 0.59509339 insignificant 1.0000e+00 1.00000 insignificant 5.8988e-01 0.7133832 insignificant 1.0000e+00 1 insignificant 0.0064951 0.84582467 insignificant 1.00000 insignificant 0.851190 0.672111 0.18035236 9 0.780885 0.706369 0.0745155 1.4958e-08 9.9993e-01 weaklyHypermeth 4.5326e-07 1.0000e+00 weaklyHypermeth 1.3232e-03 9.9990e-01 weaklyHypermeth 3.0072e-02 1.0000000 weaklyHypermeth 0.1135559 6.7471e-02 insignificant 1.0000e+00 insignificant 0.851092 0.840030 0.01009160 9 0.786500 0.799775 -0.01327425 4.8482e-01 0.8456068 insignificant 1.0000e+00 1 insignificant 3.7456e-01 0.909753 insignificant 1.0000e+00 1 insignificant 0.0227582 0.51886770 insignificant 1.00000 insignificant 0.670886 0.839909 -0.1673102 9 0.668280 0.779752 -0.1114719 9.7430e-01 9.2913e-06 weaklyHypometh 1.0000e+00 3.4412e-04 weaklyHypometh 8.8888e-01 2.1660e-03 weaklyHypometh 1.000000 7.4690e-02 weaklyHypometh -0.0907977 1.4403e-01 insignificant 1.000000 insignificant chr11 100106450 100107450 39746 ENSG00000223242 0.6344906 224 6 0.731548 161 6 0.6744898 95 6 0.8177492 158 6 0.677290 89 6 0.699438 380 6 0.633598 112 6 0.692774 126 6 0.6660943 120 6 0.6524231 103 5 0.753950 274 6 0.782509 65 4 0.7074304 139 6 0.777143 22 3 0.703395 118 6 0.606019 83 4 0.7845286 85 4 0.563076 172 6 0.681520 173 6 0.659110 295 7 0.570284 78 6 0.687392 79 6 0.7008439 142 6 0.5109337 74 6 0.7366707 79 6 0.6770380 187 6 0.509974 127 6 0.585714 46 5 0.657754 173 6 0.730405 272 6 0.709457 227 6 0.7299726 346 7 0.6334541 174 6 0.4420821 117 6 0.647958 181 6 0.5543956 51 4 0.517367 87 6 0.632265 193 6 0.692263 221 6 0.723395 211 6 0.634899 180 6 0.716439 147 6 0.686543 195 6 0.561840 0.682507 0.6235828 0.8198928 0.674174 0.714718 0.651663 0.652264 0.6259921 0.6781030 0.707997 0.685020 0.627407 0.687199 0.639627 0.613562 0.6887933 0.595998 0.679927 0.650484 0.590195 0.602184 0.6215809 0.588535 0.682427 0.6356666 0.600026 0.658485 0.5849049 0.6829329 0.664866 0.6749379 0.5757751 0.5121616 0.604440 0.504823 0.564563 0.590880 0.6443844 0.663571 0.6573052 0.6645318 0.6346475 5 0.659987 0.672131 0.0083608 6 0.666974 0.655701 0.0112729 0.523356 7.4334e-01 insignificant 1 1.000000 insignificant 0.10470 9.0002e-01 insignificant 1 1.000000 insignificant 4.4392e-02 0.1337768 insignificant 1 insignificant 0.660094 0.582814 0.09875296 6 0.690828 0.602518 0.088310 6.1928e-08 9.9910e-01 weaklyHypermeth 1.5104e-06 1.0000e+00 weaklyHypermeth 3.4500e-06 9.9894e-01 weaklyHypermeth 1.6429e-04 1.0000e+00 weaklyHypermeth 0.123675 1.1403e-02 weaklyHypermeth 2.7811e-01 insignificant 0.660094 0.709644 -0.0031686 6 0.690828 0.708012 -0.0171848 8.6416e-01 0.40768336 insignificant 1.0000e+00 1.00000 insignificant 6.6627e-01 0.5226083 insignificant 1.0000e+00 1 insignificant 0.0042209 0.84630333 insignificant 1.00000 insignificant 0.672877 0.582814 0.09251981 6 0.692230 0.602518 0.0897123 2.0460e-06 9.9917e-01 weaklyHypermeth 5.1150e-05 1.0000e+00 weaklyHypermeth 7.0515e-04 9.7957e-01 weaklyHypermeth 1.9588e-02 1.0000000 weaklyHypermeth 0.0792829 8.2546e-02 insignificant 1.0000e+00 insignificant 0.672877 0.709644 -0.00968116 6 0.692230 0.708012 -0.01578235 8.5685e-01 0.2624654 insignificant 1.0000e+00 1 insignificant 8.4928e-01 0.231721 insignificant 1.0000e+00 1 insignificant -0.0401713 0.18482197 insignificant 1.00000 insignificant 0.582814 0.709644 -0.1025660 6 0.602518 0.708012 -0.1054946 9.9982e-01 4.0993e-05 weaklyHypometh 1.0000e+00 1.2810e-03 weaklyHypometh 9.9809e-01 4.9358e-04 weaklyHypometh 1.000000 2.3504e-02 weaklyHypometh -0.1194542 1.4126e-02 weaklyHypometh 0.362201 insignificant chr11 101643750 101644750 39775 YAP1 ENSG00000137693 0.0090441 399 10 0.018526 402 10 0.0067881 338 10 0.0073260 278 10 0.000000 206 10 0.016102 469 10 0.013055 390 10 0.019436 314 10 0.0051622 492 10 0.0024557 431 10 0.011472 320 10 0.009840 452 10 0.0088828 356 10 0.019048 101 5 0.029249 488 10 0.097984 370 10 0.0088523 487 10 0.007599 362 10 0.000000 168 10 0.016845 413 10 0.048148 74 6 0.000000 199 10 0.0086765 319 10 0.0060606 175 10 0.0000000 134 10 0.0480400 431 10 0.010130 169 10 0.067244 83 9 0.033461 298 10 0.086033 388 10 0.020358 361 10 0.0019342 622 10 0.0048387 286 10 0.0078986 290 10 0.010101 186 9 0.0271645 101 10 0.050794 100 10 0.203183 384 10 0.117003 607 10 0.021441 482 10 0.000000 340 10 0.116342 433 10 0.024032 338 10 0.011801 0.012677 0.0059954 0.0069853 0.000000 0.015042 0.013134 0.014884 0.0054289 0.0046092 0.014622 0.010421 0.011200 0.010963 0.030694 0.009981 0.0102380 0.010468 0.000000 0.018654 0.051093 0.000000 0.0088258 0.014212 0.000000 0.0464840 0.011346 0.064396 0.0031679 0.0429493 0.017275 0.0015256 0.0055326 0.0095273 0.014561 0.031031 0.027796 0.109108 0.0271147 0.019900 0.0000000 0.0236093 0.0229307 10 0.012161 0.020289 -0.0076488 10 0.017605 0.025960 -0.0083543 0.960961 3.1197e-02 weaklyHypometh 1 1.000000 insignificant 0.72506 4.8797e-01 insignificant 1 1.000000 insignificant -1.2124e-02 0.2210218 insignificant 1 insignificant 0.012161 0.055679 -0.04265680 10 0.017605 0.068958 -0.051352 1.0000e+00 6.6357e-06 weaklyHypometh 1.0000e+00 1.1059e-03 weaklyHypometh 9.9764e-01 1.0529e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.035280 3.1352e-01 insignificant 1.0000e+00 insignificant 0.012161 0.023182 -0.0121319 10 0.017605 0.074694 -0.0570885 9.8747e-01 0.00111772 weaklyHypometh 1.0000e+00 0.49585 insignificant 9.9598e-01 0.0375259 weaklyHypometh 1.0000e+00 1 insignificant -0.0403803 0.18580999 insignificant 1.00000 insignificant 0.020289 0.055679 -0.03543316 10 0.025960 0.068958 -0.0429981 9.9937e-01 1.4172e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.8816e-01 2.4496e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0231562 5.0283e-01 insignificant 1.0000e+00 insignificant 0.020289 0.023182 -0.00707797 10 0.025960 0.074694 -0.04873423 8.5938e-01 0.0838642 insignificant 1.0000e+00 1 insignificant 9.8115e-01 0.052753 insignificant 1.0000e+00 1 insignificant -0.0282566 0.33697079 insignificant 1.00000 insignificant 0.055679 0.023182 0.0269330 10 0.068958 0.074694 -0.0057362 1.8941e-01 9.6393e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.3729e-01 7.2235e-01 insignificant 1.000000 1.0000e+00 insignificant -0.0051004 9.0184e-01 insignificant 1.000000 insignificant chr11 110659750 110660750 39912 C11orf53 ENSG00000150750 0.8247834 743 19 0.712036 436 18 0.7233969 424 19 0.8617830 634 19 0.863560 273 13 0.896989 830 19 0.862697 449 12 0.849572 433 15 0.8601840 385 18 0.8711021 336 16 0.826178 588 21 0.746323 222 11 0.8600812 385 15 0.922170 173 9 0.917698 518 18 0.546968 226 10 0.6855700 116 13 0.648562 808 19 0.939083 493 15 0.883412 703 18 0.657902 129 5 0.876775 223 17 0.8890311 452 22 0.7403943 164 8 0.8705285 168 18 0.9348943 635 18 0.731555 323 14 0.696597 148 6 0.809907 467 15 0.917804 581 15 0.907873 558 20 0.7407857 574 19 0.5884813 526 17 0.6744388 472 18 0.437787 418 9 0.4333415 111 10 0.609946 441 19 0.419308 704 21 0.848945 923 19 0.850460 835 19 0.903103 821 19 0.831439 702 19 0.840610 1010 22 0.834538 0.746927 0.7553005 0.8877981 0.896274 0.901353 0.823627 0.807904 0.8365863 0.8434981 0.814207 0.725026 0.855980 0.845770 0.871013 0.684945 0.7362757 0.776748 0.918506 0.888136 0.799785 0.807773 0.8530945 0.777346 0.855539 0.9156625 0.719244 0.832952 0.8717644 0.9434391 0.895764 0.7400232 0.5304863 0.6619062 0.486431 0.485555 0.664312 0.467441 0.9251285 0.846948 0.8768764 0.8404730 0.8359570 6 0.822227 0.844605 -0.0186676 18 0.814557 0.824394 -0.0098364 0.994981 2.4509e-01 insignificant 1 1.000000 insignificant 0.99702 6.5988e-01 insignificant 1 1.000000 insignificant 6.0343e-04 0.9868610 insignificant 1 insignificant 0.822239 0.504117 0.32417332 18 0.815117 0.535150 0.279967 2.7502e-48 1.0000e+00 hypermethylated 6.8756e-46 1.0000e+00 hypermethylated 1.2432e-13 1.0000e+00 hypermethylated 3.1080e-11 1.0000e+00 hypermethylated 0.287890 4.9069e-04 hypermethylated 2.0446e-02 hypermethylated 0.822579 0.854113 -0.0358181 19 0.856784 0.806051 0.0507327 1.0000e+00 0.05026825 insignificant 1.0000e+00 1.00000 insignificant 9.9771e-01 0.2711314 insignificant 1.0000e+00 1 insignificant -0.0398040 0.14475063 insignificant 1.00000 insignificant 0.844570 0.504117 0.34309780 18 0.817640 0.535150 0.2824899 6.1422e-35 1.0000e+00 hypermethylated 1.2284e-32 1.0000e+00 hypermethylated 1.4502e-11 1.0000e+00 hypermethylated 2.4170e-09 1.0000000 hypermethylated 0.2872867 4.2129e-04 hypermethylated 1.7554e-02 hypermethylated 0.846154 0.854278 -0.01468974 18 0.858991 0.831556 0.02743506 9.8060e-01 0.5126371 insignificant 1.0000e+00 1 insignificant 9.2575e-01 0.953730 insignificant 1.0000e+00 1 insignificant -0.0404075 0.20706682 insignificant 1.00000 insignificant 0.504120 0.854278 -0.3655699 18 0.538079 0.831556 -0.2934766 1.0000e+00 1.7253e-20 hypomethylated 1.0000e+00 5.0195e-18 hypomethylated 1.0000e+00 1.2198e-08 hypomethylated 1.000000 3.0496e-06 hypomethylated -0.3276942 4.9908e-04 hypomethylated 0.042274 hypomethylated chr11 110812650 110813650 39921 POU2AF1 ENSG00000110777 0.2222222 18 0 0.282220 116 6 0.3473320 199 6 0.3942280 74 6 0.286580 98 6 0.217460 115 6 0.318223 56 5 0.335714 139 6 0.3100427 100 6 0.4465716 131 6 0.514150 180 6 0.271104 46 6 0.5725233 123 6 0.376935 97 6 0.417007 191 6 0.176720 70 6 0.0000000 4 0 0.206464 59 5 0.258718 106 6 0.328571 70 6 0.381262 75 6 0.272667 96 6 0.4315476 46 6 0.2317890 67 6 0.3866213 49 6 0.4904939 139 6 0.166864 182 6 0.308576 125 6 0.294905 105 6 0.396199 171 6 0.349111 127 6 0.3810185 74 6 0.0676018 165 6 0.0000000 74 6 0.355376 193 6 0.0555556 18 0 0.262116 129 6 0.119595 197 6 0.460764 56 6 0.570742 54 3 0.225595 52 6 0.441468 41 6 0.452381 25 3 0.254658 0.314526 0.3775195 0.4233497 0.342932 0.375136 0.305491 0.409197 0.3099618 0.4997575 0.503246 0.347493 0.597829 0.407714 0.561829 0.261106 NA 0.241629 0.260382 0.356477 0.290272 0.396396 0.4485359 0.322431 0.476868 0.6631504 0.242550 0.359881 0.3553978 0.5208855 0.367719 0.4087129 0.0765898 0.0000000 0.241394 0.064182 0.264981 0.138942 0.5067115 0.584568 0.2355812 0.4919772 0.4915705 3 0.377008 0.382962 -0.0072450 6 0.282883 0.246380 0.0365032 0.762718 7.7425e-01 insignificant 1 1.000000 insignificant 0.94795 6.9343e-01 insignificant 1 1.000000 insignificant -2.6782e-02 0.4898517 insignificant 1 insignificant 0.377074 0.130155 0.26415740 6 0.289460 0.328998 -0.039538 4.2283e-10 9.8645e-01 hypermethylated 1.2081e-08 1.0000e+00 hypermethylated 3.7717e-06 7.5638e-01 hypermethylated 1.7144e-04 1.0000e+00 hypermethylated 0.170765 2.6689e-02 weaklyHypermeth 5.2426e-01 insignificant 0.377969 0.434211 -0.0456732 6 0.311825 0.424155 -0.1123296 5.1597e-01 0.02551318 weaklyHypometh 1.0000e+00 1.00000 insignificant 8.8817e-01 0.0193067 weaklyHypometh 1.0000e+00 1 insignificant -0.1160507 0.11295213 lowCoverage 1.00000 lowCoverage 0.384307 0.130155 0.27625211 6 0.275656 0.328998 -0.0533418 3.2170e-08 9.9986e-01 hypermethylated 9.1916e-07 1.0000e+00 hypermethylated 3.0780e-06 9.3461e-01 hypermethylated 1.8106e-04 1.0000000 hypermethylated 0.1975471 1.4259e-02 weaklyHypermeth 2.9706e-01 insignificant 0.386602 0.434211 -0.03548761 6 0.323737 0.424155 -0.10041762 5.7836e-01 0.1031117 insignificant 1.0000e+00 1 insignificant 8.0166e-01 0.123020 insignificant 1.0000e+00 1 insignificant -0.0892689 0.20111720 lowCoverage 1.00000 lowCoverage 0.129366 0.434211 -0.2719477 6 0.286247 0.424155 -0.1379071 1.0000e+00 3.4190e-05 hypomethylated 1.0000e+00 1.1029e-03 hypomethylated 9.9969e-01 9.0983e-05 hypomethylated 1.000000 6.9987e-03 hypomethylated -0.2868160 5.7043e-03 lowCoverage 0.196699 lowCoverage chr11 112574050 112575050 39963 NCAM1 ENSG00000149294 0.7620269 175 5 0.712564 84 5 0.5557265 78 5 0.6642829 133 5 0.671825 38 5 0.648000 74 5 0.447253 42 5 0.639209 76 5 0.5648148 37 5 0.7371032 36 5 0.779687 117 5 0.650000 14 0 0.7888889 47 5 0.866667 28 5 0.585859 38 5 0.333333 6 0 NA 0 0 0.657994 136 5 0.600000 55 5 0.482304 49 5 0.651852 29 3 0.800000 5 0 0.6057143 106 5 0.6500000 27 2 0.3466667 50 5 0.6748538 93 5 0.670068 25 3 0.500000 10 0 0.671111 62 5 0.489011 86 5 0.656190 65 5 0.6877709 48 2 0.6815476 90 5 0.7133333 81 5 0.725556 85 5 0.7083333 7 0 0.519048 64 5 0.807692 79 5 0.675729 150 5 0.742635 160 5 0.749168 131 5 0.771167 122 5 0.695839 123 5 0.713138 0.711045 0.5578731 0.6642256 0.673458 0.646923 0.453825 0.636602 0.6752137 0.6852106 0.775971 0.649038 0.787393 0.871795 0.587607 0.525896 NA 0.784764 0.597902 0.481924 0.648090 0.807692 0.6070055 0.649038 0.355678 0.6702654 0.738553 0.500000 0.6730769 0.5849535 0.652747 0.6841808 0.6763965 0.7083333 0.723611 0.723862 0.520147 0.805473 0.7110209 0.741249 0.7464488 0.7699840 0.6951184 0 0.670625 0.630363 0.0467186 5 0.580082 0.522015 0.0580667 0.068878 9.5615e-01 insignificant 1 1.000000 insignificant 0.52955 8.7445e-01 insignificant 1 1.000000 insignificant 2.2408e-02 0.6244528 lowCoverage 1 lowCoverage 0.671178 0.692118 -0.00926065 5 0.678781 0.703847 -0.025066 1.9194e-01 3.3792e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.0739e-01 2.1968e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.053241 2.9767e-01 lowCoverage 1.0000e+00 lowCoverage 0.671157 0.721574 -0.0523121 5 0.676762 0.694059 -0.0172972 9.6340e-01 0.06850661 insignificant 1.0000e+00 1.00000 insignificant 9.8677e-01 0.0917534 insignificant 1.0000e+00 1 insignificant -0.0875635 0.01893143 lowCoverage 0.90150 lowCoverage 0.631841 0.692118 -0.06217857 5 0.630821 0.703847 -0.0730262 1.9403e-01 1.7545e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 3.8891e-01 6.3432e-02 insignificant 1.0000e+00 1.0000000 insignificant -0.0756485 1.6887e-01 lowCoverage 1.0000e+00 lowCoverage 0.630795 0.721574 -0.10079426 5 0.525684 0.694059 -0.16837503 9.9998e-01 0.0075264 weaklyHypometh 1.0000e+00 1 insignificant 9.9980e-01 0.047456 weaklyHypometh 1.0000e+00 1 insignificant -0.1099711 0.01225325 lowCoverage 0.75826 lowCoverage 0.692118 0.722222 -0.0372740 5 0.703847 0.732871 -0.0290239 6.1406e-01 3.0090e-04 weaklyHypometh 1.0000e+00 7.9184e-03 weaklyHypometh 8.6582e-01 4.3691e-02 weaklyHypometh 1.000000 6.9351e-01 insignificant -0.0343226 4.4815e-01 lowCoverage 1.000000 lowCoverage chr11 113064850 113065850 39977 ENSG00000211180 0.9416209 110 7 0.745912 283 7 0.6780045 44 6 0.9064010 89 4 0.625850 55 4 0.851890 216 7 0.764909 56 7 0.909384 69 7 0.9107143 30 2 0.8095238 24 3 0.878828 296 7 0.866667 11 2 0.9535714 38 3 0.942857 29 2 0.854167 24 2 0.875000 17 2 NA 0 0 0.851642 96 4 0.925000 55 7 0.882660 171 7 0.839286 35 2 1.000000 11 0 0.8666667 42 3 0.8333333 61 4 0.8339599 49 3 0.7702441 197 7 0.934524 25 1 0.892857 19 2 0.767857 51 4 0.851005 210 7 0.898379 177 7 0.8879341 210 7 0.8940887 117 7 0.8080848 36 2 0.739677 329 7 0.9722222 24 2 0.837788 74 5 0.781149 172 7 0.919028 136 7 0.791544 126 7 0.882189 67 4 0.962500 28 2 0.937500 65 7 0.896234 0.670566 0.5708995 0.8486614 0.620238 0.835342 0.689901 0.862876 0.8312500 0.8916667 0.812095 0.870527 0.923750 0.893333 0.716667 0.883861 NA 0.821514 0.878889 0.766065 0.702083 1.000000 0.7544444 0.791667 0.816194 0.8193370 0.888194 0.800000 0.7952381 0.8233971 0.868221 0.8106759 0.8355090 0.7865098 0.764679 0.951269 0.758266 0.819745 0.8569838 0.845613 0.7777056 0.9200000 0.8666667 0 0.849971 0.890524 -0.0246083 7 0.836593 0.835055 0.0015382 0.957085 2.7690e-02 weaklyHypometh 1 1.000000 insignificant 0.81534 1.2083e-01 insignificant 1 1.000000 insignificant -1.3376e-02 0.6358984 lowCoverage 1 lowCoverage 0.849971 0.894947 -0.00405441 7 0.836593 0.818945 0.017648 3.5219e-01 1.7077e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 5.3657e-01 4.5815e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.012460 7.6196e-01 lowCoverage 1.0000e+00 lowCoverage 0.849971 0.864929 -0.0511919 7 0.836593 0.879595 -0.0430020 9.9805e-01 0.00727547 weaklyHypometh 1.0000e+00 0.80839 insignificant 9.9744e-01 0.0140440 weaklyHypometh 1.0000e+00 1 insignificant -0.0472575 0.22719809 lowCoverage 1.00000 lowCoverage 0.890524 0.894947 0.01489697 7 0.835055 0.818945 0.0161098 1.6612e-01 3.5302e-03 inconclusive 1.0000e+00 5.0432e-01 insignificant 1.4167e-01 4.4917e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0258355 5.2568e-01 lowCoverage 1.0000e+00 lowCoverage 0.890524 0.864929 -0.03142608 7 0.835055 0.879595 -0.04454017 9.9796e-01 0.0049603 weaklyHypometh 1.0000e+00 1 insignificant 9.9785e-01 0.084406 insignificant 1.0000e+00 1 insignificant -0.0338819 0.36654235 lowCoverage 1.00000 lowCoverage 0.894947 0.864929 -0.0521414 7 0.818945 0.879595 -0.0606500 7.3145e-01 1.8816e-03 weaklyHypometh 1.0000e+00 4.1814e-02 weaklyHypometh 9.5935e-01 4.0649e-02 weaklyHypometh 1.000000 6.8082e-01 insignificant -0.0597173 2.2001e-01 insignificant 1.000000 insignificant chr11 113590350 113591350 39988 ENSG00000221112 0.7947559 216 5 0.777924 143 5 0.7773333 128 5 0.8201491 159 5 0.702778 46 5 0.788051 225 5 0.819481 118 5 0.847077 124 5 0.6639323 143 5 0.8531784 123 5 0.776517 157 5 0.851090 76 5 0.7720498 141 5 NA 0 0 0.791593 129 5 0.683333 33 5 0.7062745 91 5 0.725379 132 5 0.879814 138 5 0.806869 165 5 0.920000 25 3 0.743044 69 5 0.8400000 126 5 0.9200000 76 5 0.9607143 52 4 0.8329105 179 5 0.906667 41 5 0.986667 49 3 0.826425 139 5 0.852593 241 5 0.841163 200 5 0.8096317 318 5 0.7040452 125 5 0.7156037 83 5 0.610526 47 2 0.7666667 34 5 0.832867 56 5 0.662768 206 5 0.830278 175 5 0.825795 230 5 0.789808 180 5 0.757793 249 5 0.865000 162 5 0.818273 0.800114 0.7978750 0.8485635 0.741354 0.813600 0.846577 0.861052 0.6848211 0.8647984 0.801370 0.871198 0.790580 NA 0.811544 0.710938 0.7267892 0.749412 0.896374 0.827212 0.935000 0.766509 0.8670000 0.935000 0.953237 0.8569948 0.907917 0.987500 0.8431373 0.8775198 0.864616 0.8260117 0.7110947 0.7291834 0.658553 0.802083 0.845236 0.687507 0.8561567 0.852480 0.8160437 0.7839941 0.8903125 5 0.785283 0.823762 -0.0468176 5 0.788730 0.834817 -0.0460877 0.999935 2.3000e-03 weaklyHypometh 1 0.328573 insignificant 0.99999 2.4105e-05 weaklyHypometh 1 0.024105 weaklyHypometh -8.9059e-02 0.0015082 lowCoverage 1 lowCoverage 0.785283 0.686025 0.08011072 5 0.788730 0.706455 0.082274 1.2219e-04 9.6539e-01 weaklyHypermeth 2.5457e-03 1.0000e+00 weaklyHypermeth 1.1860e-01 7.8093e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.065512 1.0089e-01 lowCoverage 1.0000e+00 lowCoverage 0.785283 0.817269 -0.0207122 5 0.788730 0.809137 -0.0204076 9.0179e-01 0.05541350 insignificant 1.0000e+00 1.00000 insignificant 9.3494e-01 0.0224270 weaklyHypometh 1.0000e+00 1 insignificant -0.0328096 0.18762947 lowCoverage 1.00000 lowCoverage 0.823762 0.686025 0.12829431 5 0.834817 0.706455 0.1283617 5.7582e-06 9.9910e-01 weaklyHypermeth 1.3391e-04 1.0000e+00 weaklyHypermeth 2.3988e-03 9.9344e-01 weaklyHypermeth 4.9235e-02 1.0000000 weaklyHypermeth 0.1545716 2.5589e-03 lowCoverage 7.9965e-02 lowCoverage 0.823762 0.817269 0.02731587 5 0.834817 0.809137 0.02568003 2.4636e-01 0.7086000 insignificant 1.0000e+00 1 insignificant 2.1293e-02 0.885125 weaklyHypermeth 6.8688e-01 1 insignificant 0.0562498 0.05982299 lowCoverage 1.00000 lowCoverage 0.686025 0.817269 -0.0990487 5 0.706455 0.809137 -0.1026817 9.9765e-01 2.4924e-03 weaklyHypometh 1.0000e+00 5.4184e-02 weaklyHypometh 9.8225e-01 4.0849e-02 weaklyHypometh 1.000000 6.8082e-01 insignificant -0.0983218 2.8640e-02 lowCoverage 0.637474 lowCoverage chr11 115123550 115124550 40018 ENSG00000211200 0.7867974 233 6 0.779267 125 6 0.8214212 89 5 0.817151 121 6 0.780045 59 6 0.8058575 253 6 0.7807108 95 6 0.7496075 141 6 0.7428461 111 6 0.7475490 91 5 0.8069825 229 6 0.5819444 75 5 0.8090177 117 6 0.8636364 14 1 0.8087454 115 6 0.7736479 40 2 0.485417 71 6 0.770846 143 6 0.872636 123 6 0.8265175 209 6 0.6164966 37 4 0.7787037 46 4 0.818580 156 6 0.752222 58 5 0.8499833 48 5 0.8226050 244 6 0.7569444 43 2 0.642857 29 3 0.819250 100 6 0.8187689 172 6 0.8250577 164 6 0.807751 275 6 0.6521493 99 6 0.7257980 86 6 0.7529577 141 6 0.833939 42 4 0.5902778 77 5 0.8140741 173 6 0.8130208 229 6 0.8219916 219 6 0.72183640 182 6 0.7241256 141 6 0.8212886 151 6 0.8313460 0.7697087 0.8218334 0.9054928 0.8218157 0.8231318 0.7502357 0.8003663 0.7596340 0.8866197 0.8302138 0.7983740 0.8834080 0.7799568 0.8391202 0.8223936 0.7457317 0.7994881 0.8902393 0.825915 0.8144599 0.7495257 0.884110 0.7391430 0.85279152 0.8598454 0.8053618 0.8353659 0.8841499 0.8317280 0.7869819 0.8401865 0.6855762 0.7052455 0.7729996 0.844882 0.7184657 0.8090696 0.9018962 0.8852847 0.89850263 0.8217061 0.847956 4 0.792584 0.8053936 -0.00909556 6 0.772222 0.735522 3.6700e-02 0.7566048 5.4800e-01 insignificant 1 1.0000000 insignificant 0.881452 3.8016e-01 insignificant 1 1.000000 insignificant -0.00523624 0.8595317 lowCoverage 1 lowCoverage 0.792977 0.7394822 0.06301803 6 0.778571 0.7340579 0.04451346 5.5255e-04 9.8591e-01 weaklyHypermeth 7.5692e-03 1.0000e+00 weaklyHypermeth 1.9274e-02 9.5854e-01 weaklyHypermeth 2.6770e-01 1.0000e+00 insignificant 0.04233276 3.5590e-01 insignificant 1.0000e+00 insignificant 0.793061 0.8264642 -0.0470899 6 0.806250 0.7795103 2.6740e-02 6.2283e-01 3.3735e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 7.0087e-01 5.9564e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00992048 7.5404e-01 insignificant 1.0000000 insignificant 0.8068764 0.7394822 0.07304487 6 0.767100 0.7340579 0.0330419 4.7233e-04 9.6783e-01 weaklyHypermeth 6.6526e-03 1.0000e+00 weaklyHypermeth 6.7406e-03 9.7355e-01 weaklyHypermeth 1.0423e-01 1.0000e+00 insignificant 0.04756900 3.0899e-01 lowCoverage 1.0000e+00 lowCoverage 0.8070175 0.8264642 -0.03331439 6 0.7962123 0.7795103 0.0167020 8.0716e-01 1.0304e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.4764e-01 1.2039e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.0046842 0.8857136 lowCoverage 1.00000 lowCoverage 0.7394822 0.8262758 -0.1071636 6 0.7340579 0.7480118 -0.0139539 9.2692e-01 7.7162e-07 weaklyHypometh 1.0000e+00 2.6607e-05 weaklyHypometh 9.2723e-01 1.0099e-03 weaklyHypometh 1.0000e+00 3.1559e-02 weaklyHypometh -0.0522532 2.7818e-01 insignificant 1.00000000 insignificant chr11 116394750 116395750 40029 ENSG00000200537 0.6665216 237 7 0.646194 157 8 0.6482474 124 7 0.729167 122 7 0.551515 73 7 0.6924580 326 7 0.6633980 136 7 0.6481424 101 7 0.6625817 130 8 0.6919816 95 7 0.7176069 201 8 0.5841837 91 6 0.7490152 117 8 0.4615385 14 1 0.6100233 100 7 0.6009615 85 6 0.701247 134 7 0.708089 137 6 0.660904 137 8 0.7140162 261 7 0.5878788 61 7 0.7255411 78 6 0.706944 125 6 0.750882 63 4 0.6125000 63 6 0.6976430 179 7 0.6511668 84 6 0.736218 65 5 0.586153 130 8 0.6525765 182 8 0.6732725 155 8 0.612895 408 8 0.6287001 153 7 0.5887001 118 6 0.6159188 114 8 0.468750 49 5 0.7186328 129 7 0.6124385 184 8 0.6874397 218 8 0.7396465 222 8 0.72840193 182 7 0.6587834 206 7 0.6774271 183 8 0.6550585 0.6580287 0.6267759 0.6781301 0.5680966 0.6988164 0.6282357 0.6087411 0.6596657 0.6623576 0.6889409 0.5618204 0.7345952 NA 0.5985508 0.6250055 0.6722903 0.6388050 0.6218841 0.682932 0.5402519 0.6940657 0.661267 0.6822688 0.69839357 0.6497776 0.6510938 0.6695706 0.5738497 0.6363951 0.6693180 0.6719048 0.5639262 0.5959942 0.5505269 0.556894 0.6927948 0.5866430 0.6810325 0.7187942 0.65957951 0.6903232 0.675301 6 0.672426 0.6779661 0.00395772 7 0.646331 0.660896 -1.4565e-02 0.6104641 6.4353e-01 insignificant 1 1.0000000 insignificant 0.871240 1.6934e-01 insignificant 1 1.000000 insignificant -0.01074965 0.6385727 insignificant 1 insignificant 0.672793 0.6238286 0.06665746 7 0.685455 0.6254081 0.06004732 6.1153e-04 9.9316e-01 weaklyHypermeth 8.2639e-03 1.0000e+00 weaklyHypermeth 2.5323e-02 9.9790e-01 weaklyHypermeth 3.2466e-01 1.0000e+00 insignificant 0.04986620 2.0979e-01 insignificant 1.0000e+00 insignificant 0.672793 0.6745796 -0.0231952 8 0.685455 0.7062241 -2.0769e-02 9.6729e-01 2.3280e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8249e-01 7.3982e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04295014 6.8598e-02 insignificant 1.0000000 insignificant 0.6781898 0.6238286 0.06308339 7 0.681008 0.6254081 0.0556000 2.1618e-03 9.9357e-01 weaklyHypermeth 2.5736e-02 1.0000e+00 weaklyHypermeth 3.0368e-03 9.9921e-01 weaklyHypermeth 5.5215e-02 1.0000e+00 weaklyHypermeth 0.06061586 1.4073e-01 insignificant 1.0000e+00 insignificant 0.6781898 0.6745796 -0.02738593 7 0.6810081 0.7062241 -0.0252160 9.2294e-01 2.3714e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.1563e-01 3.5565e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.0322005 0.1807531 insignificant 1.00000 insignificant 0.6238286 0.6745796 -0.0900425 7 0.6254081 0.7062241 -0.0808160 9.9980e-01 4.2544e-04 weaklyHypometh 1.0000e+00 9.4543e-03 weaklyHypometh 9.9999e-01 4.0501e-03 weaklyHypometh 1.0000e+00 9.3734e-02 weaklyHypometh -0.0928163 3.7770e-02 weaklyHypometh 0.66263602 insignificant chr11 117996050 117997050 40071 PHLDB1 ENSG00000019144 0.6089760 108 9 0.683696 157 6 0.6261905 52 7 0.674410 100 7 0.571104 76 6 0.6208517 113 8 0.6867965 81 6 0.8392507 110 7 0.7168172 69 6 0.7263228 78 5 0.6846121 154 7 0.7380952 21 1 0.8577241 118 7 0.7976954 43 5 0.6989049 77 6 1.0000000 16 1 0.528439 117 7 0.634656 59 3 0.691290 94 8 0.7215394 111 9 0.8071429 42 4 0.7400000 17 1 0.626458 94 6 0.591534 51 6 0.5598846 67 5 0.4736853 221 9 0.8311012 45 4 0.556818 31 3 0.828852 102 7 0.6367763 239 9 0.7818113 201 9 0.735109 125 9 0.6312788 151 7 0.4883814 110 7 0.7151305 136 7 0.479167 15 0 0.4653061 78 6 0.5828290 165 9 0.6529697 89 8 0.7465765 161 8 0.52025613 90 7 0.4937500 49 2 0.6823626 95 8 0.8245043 0.7909156 0.8059361 0.8593289 0.6107306 0.9025422 0.8116438 0.8916772 0.7448171 0.7822425 0.8419344 0.7945205 0.8108160 0.7275894 0.7286328 0.9415490 0.8384715 0.8045662 0.9005469 0.810353 0.8397260 0.8724612 0.743108 0.7488584 0.83105023 0.8604811 0.7784083 0.6181507 0.8726833 0.8804376 0.8944879 0.8188062 0.6934209 0.6771455 0.8760203 0.710046 0.6327462 0.8275007 0.8555251 0.9129142 0.74088982 0.7722603 0.885205 0 0.692571 0.7066451 -0.02420460 6 0.592953 0.576285 1.6667e-02 0.6304627 1.7637e-01 insignificant 1 1.0000000 insignificant 0.360227 4.3947e-01 insignificant 1 1.000000 insignificant 0.02460415 0.5689100 insignificant 1 insignificant 0.692705 0.5764526 0.12918032 6 0.602302 0.5150868 0.08721505 2.2121e-03 9.9996e-01 weaklyHypermeth 2.7309e-02 1.0000e+00 weaklyHypermeth 1.1066e-02 1.0000e+00 weaklyHypermeth 1.6516e-01 1.0000e+00 insignificant 0.14501984 1.4107e-02 weaklyHypermeth 3.0016e-01 insignificant 0.693936 0.7199170 -0.0322714 5 0.706735 0.6838516 2.2883e-02 9.7899e-01 7.1451e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.5358e-01 8.2838e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.08618560 1.6072e-01 insignificant 1.0000000 insignificant 0.7087777 0.5764526 0.16897958 7 0.650912 0.5150868 0.1358256 1.2679e-06 9.9664e-01 weaklyHypermeth 2.8815e-05 1.0000e+00 weaklyHypermeth 2.9836e-03 9.9963e-01 weaklyHypermeth 5.5215e-02 1.0000e+00 weaklyHypermeth 0.12041570 4.5286e-02 weaklyHypermeth 7.1883e-01 insignificant 0.7081301 0.7184265 0.00053958 8 0.6293535 0.6481373 -0.0187838 4.6308e-01 3.8048e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.1745e-01 2.9573e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.0615815 0.3317549 insignificant 1.00000 insignificant 0.5779817 0.7193347 -0.1077930 5 0.5984201 0.6728268 -0.0744067 9.9969e-01 1.3879e-02 weaklyHypometh 1.0000e+00 1.6926e-01 insignificant 9.9917e-01 5.4462e-02 insignificant 1.0000e+00 7.2616e-01 insignificant -0.0588342 3.7952e-01 insignificant 1.00000000 insignificant chr11 118010250 118011250 40073 PHLDB1 ENSG00000019144 0.0163153 514 10 0.021547 559 13 0.0703730 671 14 0.009328 544 10 0.133357 304 12 0.1940125 821 11 0.0981906 393 12 0.0848630 411 12 0.0168649 483 12 0.0158062 492 12 0.0068538 335 11 0.0170890 382 11 0.0119073 385 10 0.0568258 168 4 0.2001031 504 11 0.0138020 332 11 0.005719 283 10 0.249614 625 11 0.090498 218 10 0.0932816 662 13 0.1464062 209 11 0.1420595 486 11 0.044055 412 14 0.015664 263 12 0.0278185 510 12 0.0095802 701 14 0.1697676 444 11 0.061886 281 11 0.025261 278 12 0.0396840 787 14 0.0129119 702 12 0.141833 634 13 0.2346076 374 13 0.4469242 270 12 0.3953814 216 8 0.197147 217 13 0.3351475 196 13 0.3797861 367 13 0.0756991 579 11 0.0641917 610 11 0.03578420 547 11 0.1821380 517 10 0.1748655 722 12 0.0222494 0.0268048 0.0325236 0.0177211 0.0199964 0.0295519 0.0366298 0.0093535 0.0137103 0.0220054 0.0091518 0.0275108 0.0189588 0.0179513 0.0311198 0.0260329 0.0101388 0.1539677 0.0117923 0.016845 0.0089449 0.0804963 0.023631 0.0184385 0.04424982 0.0152909 0.0117419 0.0224884 0.0251798 0.0099476 0.0164940 0.0319339 0.4010590 0.4537833 0.3692904 0.226523 0.5328748 0.3369548 0.0547019 0.0953429 0.05784129 0.0932163 0.087573 10 0.031408 0.0250569 0.00549524 13 0.173894 0.102569 7.1325e-02 0.7531795 9.0195e-01 insignificant 1 1.0000000 insignificant 0.990083 6.1022e-01 insignificant 1 1.000000 insignificant 0.00057362 0.9812498 insignificant 1 insignificant 0.030587 0.3463415 -0.32613060 13 0.112329 0.2690396 -0.15671087 1.0000e+00 1.8379e-53 hypomethylated 1.0000e+00 1.8379e-50 hypomethylated 1.0000e+00 2.5867e-21 hypomethylated 1.0000e+00 2.5867e-18 hypomethylated -0.26118148 5.5369e-04 hypomethylated 2.2924e-02 hypomethylated 0.029656 0.0766387 -0.0507304 11 0.070577 0.1798883 -1.0931e-01 1.0000e+00 6.9006e-08 weaklyHypometh 1.0000e+00 1.7251e-05 weaklyHypometh 1.0000e+00 1.6191e-08 weaklyHypometh 1.0000e+00 8.0954e-06 weaklyHypometh -0.03621815 3.2818e-01 insignificant 1.0000000 insignificant 0.0240689 0.3469762 -0.32680432 13 0.053577 0.2818510 -0.2282740 1.0000e+00 5.9898e-36 hypomethylated 1.0000e+00 5.9898e-33 hypomethylated 1.0000e+00 1.1551e-15 hypomethylated 1.0000e+00 1.1551e-12 hypomethylated -0.26175510 5.0938e-04 hypomethylated 2.0375e-02 hypomethylated 0.0244288 0.0766387 -0.05086580 11 0.0843206 0.1798883 -0.0955677 9.9997e-01 1.2748e-09 weaklyHypometh 1.0000e+00 6.3741e-07 weaklyHypometh 9.9838e-01 1.5850e-05 weaklyHypometh 1.0000000 5.2832e-03 weaklyHypometh -0.0367918 0.3275621 insignificant 1.00000 insignificant 0.3473945 0.0757066 0.2789401 11 0.3353321 0.0705401 0.2647920 4.9840e-14 1.0000e+00 hypermethylated 4.9840e-11 1.0000e+00 hypermethylated 1.7615e-11 1.0000e+00 hypermethylated 1.7615e-08 1.0000e+00 hypermethylated 0.2249633 1.5457e-03 weaklyHypermeth 0.08135169 weaklyHypermeth chr11 118400150 118401150 40084 TRAPPC4 ENSG00000196655 0.9494438 166 5 0.900837 176 5 0.8256036 157 5 0.894957 189 5 0.728205 73 5 0.8556677 271 5 0.9162171 187 5 0.9316138 163 5 0.7131799 191 5 0.7554395 301 5 0.9662035 142 5 0.6660870 155 5 0.9437855 293 5 0.9079278 144 5 0.9166881 302 5 0.6866667 70 5 0.687135 60 4 0.802842 250 5 0.761896 152 5 0.9204199 186 5 0.7913043 68 4 0.8260367 145 4 0.925687 131 5 0.836455 118 4 0.9180556 67 4 0.8720000 173 5 0.6978628 153 4 0.593532 150 4 0.758563 169 5 0.8818990 257 5 0.8978991 226 5 0.932990 195 5 0.5961781 169 5 0.6595514 113 5 0.6466667 114 4 0.479167 26 2 0.5551038 158 5 0.4512254 161 5 0.9065190 217 5 0.6871012 172 5 0.65888584 194 5 0.5173170 178 5 0.8846763 224 5 0.9450834 0.8739463 0.8186147 0.9003568 0.8840398 0.8637098 0.9107456 0.9348246 0.8484295 0.9090352 0.9640674 0.7300989 0.9351852 0.8689937 0.9090874 0.6882498 0.7330998 0.8121176 0.9471464 0.920266 0.8921494 0.7782433 0.929194 0.8348835 0.89307680 0.8394882 0.8550913 0.8844551 0.9014739 0.8834221 0.8914802 0.9316419 0.5596234 0.7112251 0.5458698 0.464529 0.5604808 0.5617507 0.9064983 0.6486884 0.67494828 0.4330943 0.864848 4 0.881202 0.8833693 -0.00219628 5 0.750090 0.737116 1.2974e-02 0.6347951 6.0748e-01 insignificant 1 1.0000000 insignificant 0.491441 8.6558e-01 insignificant 1 1.000000 insignificant 0.00885027 0.8152145 lowCoverage 1 lowCoverage 0.881202 0.5614035 0.31876103 5 0.750090 0.5528847 0.19720541 7.4464e-17 9.6801e-01 hypermethylated 2.8640e-15 1.0000e+00 hypermethylated 1.8532e-05 9.8415e-01 hypermethylated 6.1773e-04 1.0000e+00 hypermethylated 0.27189205 8.1866e-05 lowCoverage 4.8156e-03 lowCoverage 0.883605 0.7167513 0.1623800 5 0.881926 0.7531228 1.2880e-01 2.4078e-06 9.9981e-01 weaklyHypermeth 2.1889e-04 1.0000e+00 weaklyHypermeth 1.8868e-04 9.9974e-01 weaklyHypermeth 1.8868e-02 1.0000e+00 weaklyHypermeth 0.10564083 2.2902e-01 lowCoverage 1.0000000 lowCoverage 0.8833693 0.5614035 0.32148136 5 0.737116 0.5528847 0.1842313 5.0132e-12 9.9280e-01 hypermethylated 1.5666e-10 1.0000e+00 hypermethylated 5.5116e-05 9.8574e-01 hypermethylated 1.8372e-03 1.0000e+00 hypermethylated 0.26304179 9.8141e-05 lowCoverage 5.4523e-03 lowCoverage 0.8843243 0.7167513 0.16009275 5 0.8845392 0.7531228 0.1314164 1.8316e-04 9.9989e-01 weaklyHypermeth 1.0774e-02 1.0000e+00 weaklyHypermeth 8.1355e-04 9.9985e-01 weaklyHypermeth 0.0813546 1.0000e+00 weaklyHypermeth 0.0967906 0.2715659 lowCoverage 1.00000 lowCoverage 0.5615697 0.7167513 -0.1644824 5 0.5634616 0.7531228 -0.1896611 9.0845e-01 2.0707e-03 weaklyHypometh 1.0000e+00 3.6977e-02 weaklyHypometh 9.4628e-01 8.3046e-02 insignificant 1.0000e+00 9.7701e-01 insignificant -0.1662512 8.8124e-02 lowCoverage 1.00000000 lowCoverage chr11 118754550 118755550 40095 USP2 ENSG00000036672 0.4477117 76 4 0.527104 206 5 0.4812851 234 5 0.473523 90 4 0.192085 101 4 0.4438018 127 5 0.3855625 148 5 0.4261413 121 5 0.3597619 100 4 0.2608277 122 4 0.6272085 154 5 0.7424755 73 4 0.3468750 113 4 0.1250000 8 1 0.3562771 98 5 0.3208333 43 3 0.439181 95 3 0.606154 44 4 0.241299 98 5 0.2672543 146 5 0.8500000 16 3 0.6030702 26 1 0.570515 119 5 0.410126 57 5 0.4358915 108 2 0.4024851 237 5 0.4247009 53 4 0.504762 30 4 0.288885 169 5 0.4298766 242 5 0.6625200 270 5 0.679809 145 5 0.6096230 241 5 0.6926947 78 5 0.8070175 193 4 0.306667 67 2 0.7825397 81 5 0.4831411 273 5 0.4272490 89 4 0.4926679 100 4 0.40908319 73 5 0.4799933 54 4 0.2469556 60 2 0.4750298 0.5780505 0.5677711 0.5260010 0.2296889 0.4286542 0.4426773 0.4556922 0.4388162 0.2814546 0.6359934 0.6944420 0.3213252 NA 0.3397659 0.4025822 0.3827083 0.6844348 0.2648436 0.276397 0.8851091 0.6147113 0.672458 0.4852083 0.43674528 0.4588655 0.4494944 0.5308518 0.3084091 0.4726637 0.6764989 0.7090221 0.7061513 0.7304145 0.7615518 0.359624 0.7820814 0.5083456 0.4236605 0.5340869 0.43203050 0.5062107 0.231966 0 0.452890 0.4884511 -0.03438471 5 0.439317 0.482914 -4.3596e-02 0.9087364 1.3186e-01 insignificant 1 1.0000000 insignificant 0.993019 1.9814e-02 weaklyHypometh 1 1.000000 insignificant -0.11836864 0.0472996 lowCoverage 1 lowCoverage 0.452890 0.6409432 -0.21559083 5 0.439317 0.6318781 -0.19256070 9.9989e-01 6.1486e-06 hypomethylated 1.0000e+00 1.2297e-03 hypomethylated 9.9997e-01 7.4668e-04 hypomethylated 1.0000e+00 1.2445e-01 insignificant -0.21009569 4.3205e-02 lowCoverage 6.8579e-01 lowCoverage 0.452890 0.3058511 0.0571069 4 0.439317 0.4474352 -8.1178e-03 1.5123e-01 1.3460e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 2.8830e-01 1.6385e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.00767170 8.9306e-01 lowCoverage 1.0000000 lowCoverage 0.4884511 0.6409432 -0.15500530 5 0.482914 0.6318781 -0.1489646 9.5062e-01 7.6924e-04 weaklyHypometh 1.0000e+00 1.2821e-01 insignificant 8.9252e-01 9.3854e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.09172705 3.3768e-01 lowCoverage 1.0000e+00 lowCoverage 0.4884511 0.3058511 0.11075547 4 0.4829135 0.4474352 0.0354783 3.7839e-02 7.8989e-02 lowCoverage 9.1184e-01 1.0000e+00 lowCoverage 3.5531e-02 2.8162e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage 0.1106969 0.1040105 lowCoverage 1.00000 lowCoverage 0.6409432 0.3058511 0.2552101 4 0.6318781 0.4474352 0.1844429 1.6798e-03 7.2619e-01 lowCoverage 2.0998e-01 1.0000e+00 lowCoverage 3.8404e-03 6.3383e-01 lowCoverage 4.8005e-01 1.0000e+00 lowCoverage 0.2024240 5.5263e-02 lowCoverage 0.82870125 lowCoverage chr11 118959850 118960850 40102 THY1 ENSG00000154096 0.0274677 399 14 0.007815 370 14 0.0129054 539 14 0.030370 301 8 0.080342 264 14 0.0256442 632 14 0.0263294 445 14 0.0056749 431 14 0.0069464 576 14 0.0176287 610 14 0.0661071 406 14 0.0305233 491 14 0.0036333 600 14 0.0168067 187 7 0.0200737 661 14 0.0464214 408 14 0.016422 396 14 0.070308 330 10 0.000000 300 14 0.0211249 530 14 0.0160155 298 14 0.0000000 330 10 0.048097 413 14 0.031286 294 14 0.0000000 153 7 0.0083981 576 14 0.0077809 415 14 0.001548 331 17 0.064283 316 14 0.0058437 628 14 0.0068000 583 14 0.020084 640 14 0.0000000 360 14 0.0103175 326 14 0.0023578 298 10 0.000000 91 10 0.0071429 188 14 0.0054029 395 14 0.0047118 486 14 0.0137592 360 14 0.00100604 302 12 0.0102041 276 14 0.0060359 286 10 0.0163332 0.0060428 0.0088411 0.0201457 0.0147225 0.0224223 0.0120577 0.0046564 0.0045962 0.0141732 0.0074535 0.0208152 0.0036562 0.0212519 0.0144286 0.0391742 0.0242328 0.0315018 0.0000000 0.015703 0.0074633 0.0000000 0.056779 0.0350849 0.00027161 0.0075775 0.0151479 0.0047922 0.0039514 0.0041481 0.0094806 0.0181607 0.0000000 0.0217687 0.0032357 0.000000 0.0080063 0.0060037 0.0032267 0.0166848 0.00198996 0.0035882 0.013435 8 0.015322 0.0142656 0.00151568 14 0.043434 0.017746 2.5688e-02 0.6200178 9.3095e-01 insignificant 1 1.0000000 insignificant 0.523112 9.9082e-01 insignificant 1 1.000000 insignificant 0.00911587 0.2525823 insignificant 1 insignificant 0.014998 0.0048251 0.01171235 14 0.017027 0.0043358 0.01269150 2.4960e-02 9.9987e-01 weaklyHypermeth 2.4194e-01 1.0000e+00 insignificant 2.0300e-03 1.0000e+00 weaklyHypermeth 3.7592e-02 1.0000e+00 weaklyHypermeth 0.02242370 3.5693e-04 weaklyHypermeth 1.5519e-02 weaklyHypermeth 0.015324 0.0087719 0.0050794 14 0.046149 0.0080696 3.8079e-02 3.6257e-01 9.9760e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.7942e-01 9.9996e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01948381 1.8079e-03 weaklyHypermeth 0.1291364 insignificant 0.0141414 0.0048251 0.00944417 14 0.014406 0.0043358 0.0100699 3.0858e-02 9.9996e-01 weaklyHypermeth 2.8572e-01 1.0000e+00 insignificant 5.0341e-02 1.0000e+00 insignificant 5.7404e-01 1.0000e+00 insignificant 0.01330783 5.0266e-02 insignificant 7.2849e-01 insignificant 0.0142915 0.0087719 0.00493651 14 0.0188549 0.0080696 0.0107854 5.5623e-01 9.9971e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.9407e-01 9.9999e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.0103679 0.1236272 insignificant 1.00000 insignificant 0.0048251 0.0087822 -0.0046884 14 0.0043358 0.0092224 -0.0048866 9.9742e-01 3.0209e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9996e-01 6.2692e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0029399 3.2279e-01 insignificant 1.00000000 insignificant chr11 119497650 119498650 40105 PVRL1 ENSG00000110400 0.7639005 264 6 0.688015 164 6 0.6576540 118 5 0.599670 228 5 0.664657 57 5 0.7636240 265 6 0.5575731 83 4 0.7553361 159 6 0.6292247 115 6 0.8730159 87 5 0.8765382 230 6 0.3738711 51 3 0.7582219 136 6 0.5833333 16 1 0.8162143 108 5 0.3775000 31 3 0.502463 44 3 0.767305 204 6 0.716807 111 5 0.7919426 220 6 0.8552962 123 6 0.7110119 93 4 0.645913 138 6 0.813752 69 6 0.6261021 155 5 0.7530700 226 7 0.6919733 125 6 0.423611 49 4 0.732101 171 5 0.7997156 214 6 0.6789565 220 6 0.846693 262 6 0.7317122 169 6 0.7004463 152 5 0.4583333 99 4 0.512412 86 4 0.5452130 111 7 0.6042365 267 6 0.7577423 180 4 0.6986563 231 5 0.78052353 232 4 0.6597450 132 5 0.7180730 239 4 0.7817310 0.7359962 0.7906043 0.7231407 0.6205836 0.7846728 0.7308596 0.7374359 0.6141174 0.8108974 0.8193857 0.5075865 0.7408598 0.6557413 0.7539619 0.4856691 0.6962588 0.7515601 0.8189813 0.807279 0.8341959 0.7706044 0.716362 0.8445352 0.74642250 0.7754168 0.7971786 0.8393429 0.7467105 0.8062396 0.7298664 0.8188916 0.6956082 0.6697494 0.8759410 0.478886 0.7975729 0.6066255 0.7112422 0.7925559 0.68275537 0.6642830 0.755325 3 0.782237 0.7922993 -0.02197073 6 0.736409 0.695857 4.0553e-02 0.6355947 1.4987e-01 insignificant 1 1.0000000 insignificant 0.882276 5.6474e-02 insignificant 1 1.000000 insignificant -0.03900635 0.4137640 lowCoverage 1 lowCoverage 0.782237 0.5806818 0.15531246 6 0.736409 0.5620101 0.17439936 6.9904e-09 8.5158e-01 weaklyHypermeth 1.8893e-07 1.0000e+00 weaklyHypermeth 1.7866e-01 4.7307e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.08378441 1.5190e-01 lowCoverage 1.0000e+00 lowCoverage 0.782366 0.7648221 0.0266028 5 0.746373 0.7656409 -1.9268e-02 6.6269e-02 1.1650e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.4837e-01 8.1320e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04710472 2.3608e-01 lowCoverage 1.0000000 lowCoverage 0.7918699 0.5787089 0.18601209 6 0.618539 0.4995645 0.1189747 1.2978e-07 9.8703e-01 weaklyHypermeth 3.0900e-06 1.0000e+00 weaklyHypermeth 9.9917e-02 8.7139e-01 insignificant 9.4261e-01 1.0000e+00 insignificant 0.12279076 4.9519e-02 weaklyHypermeth 7.2849e-01 insignificant 0.7930473 0.7648221 0.06008083 5 0.7476456 0.7656409 -0.0179953 4.9751e-02 4.6487e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 8.7293e-02 1.8882e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.0080984 0.8438070 lowCoverage 1.00000 lowCoverage 0.5794286 0.7648221 -0.1119253 5 0.5280115 0.7656409 -0.2376294 9.9773e-01 3.9724e-03 weaklyHypometh 1.0000e+00 6.1114e-02 weaklyHypometh 9.9370e-01 1.7084e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.1308891 3.0898e-02 lowCoverage 0.58906236 lowCoverage chr11 120612350 120613350 40128 TECTA ENSG00000109927 0.6925094 488 5 0.596898 396 5 0.4520713 83 5 0.657672 455 5 0.330585 57 5 0.5829769 461 5 0.5745036 129 5 0.6792208 108 5 0.5449938 72 5 0.5302677 46 3 0.6784242 267 5 0.6250000 23 2 0.3797794 55 2 0.7812500 20 1 0.3112319 61 3 0.6448413 33 3 0.448542 635 3 0.583970 214 5 0.285700 173 5 0.2906686 387 5 0.9200000 30 3 0.3939951 77 2 0.707740 151 5 0.431753 78 5 0.5546593 288 5 0.2536104 417 5 0.5810145 54 4 0.624542 26 2 0.652122 174 5 0.2988543 332 5 0.3072118 381 5 0.746984 329 5 0.7780727 189 5 0.7303266 139 5 0.3566562 174 5 0.883902 233 5 0.8413494 171 5 0.6945651 301 5 0.3853000 631 5 0.5707922 431 5 0.50793492 891 5 0.5012606 204 5 0.4468108 457 5 0.6907114 0.5959721 0.4656796 0.6841703 0.3536423 0.5740321 0.5540822 0.6958042 0.5074369 0.4805750 0.6886925 0.7441725 0.2385207 0.6081912 0.3422900 0.6532634 0.3779412 0.6363582 0.2654877 0.390537 0.8573427 0.2808129 0.709342 0.5848045 0.54447629 0.2094534 0.5810631 0.4862829 0.6062661 0.2623137 0.2633205 0.7342990 0.7734496 0.8082062 0.4692682 0.874294 0.8388150 0.6316336 0.3278130 0.5028127 0.44226262 0.4268747 0.369091 2 0.608748 0.4985024 0.07512616 5 0.496313 0.441238 5.5075e-02 0.0229376 9.3839e-01 weaklyHypermeth 1 1.0000000 insignificant 0.705200 8.1793e-01 insignificant 1 1.000000 insignificant -0.00581864 0.9328304 lowCoverage 1 lowCoverage 0.609093 0.7518672 -0.15161752 5 0.545575 0.7155965 -0.17002123 9.7922e-01 9.0887e-07 weaklyHypometh 1.0000e+00 2.2722e-04 weaklyHypometh 9.8826e-01 2.5118e-04 weaklyHypometh 1.0000e+00 5.0237e-02 weaklyHypometh -0.18059002 6.8294e-02 lowCoverage 9.4852e-01 lowCoverage 0.609093 0.5673298 0.0316280 5 0.545575 0.4781011 6.7474e-02 3.1652e-02 6.5305e-01 weaklyHypermeth 8.7922e-01 1.0000e+00 insignificant 2.2678e-02 8.4948e-01 weaklyHypermeth 7.8199e-01 1.0000e+00 insignificant 0.05113559 2.8191e-01 lowCoverage 1.0000000 lowCoverage 0.4987147 0.7518672 -0.24082210 5 0.462818 0.7155965 -0.2527781 9.6517e-01 2.4829e-06 hypomethylated 1.0000e+00 8.2764e-04 hypomethylated 9.9403e-01 2.9303e-03 weaklyHypometh 1.0000e+00 6.5836e-01 insignificant -0.17477138 9.9564e-02 lowCoverage 1.0000e+00 lowCoverage 0.4987147 0.5673298 -0.03201227 5 0.4628185 0.4781011 -0.0152826 5.2889e-01 1.8207e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.5480e-01 7.6245e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.0569542 0.4090670 lowCoverage 1.00000 lowCoverage 0.7518672 0.5673298 0.1905888 5 0.7155965 0.4781011 0.2374954 1.6167e-06 9.5865e-01 weaklyHypermeth 3.2335e-04 1.0000e+00 weaklyHypermeth 3.7624e-04 9.9058e-01 weaklyHypermeth 9.4061e-02 1.0000e+00 weaklyHypermeth 0.2317256 2.8713e-02 weaklyHypermeth 0.56300976 insignificant chr11 120842450 120843450 40132 SORL1 ENSG00000137642 0.8000264 224 6 0.713158 79 6 0.7626517 112 6 0.826007 81 6 0.709596 51 6 0.8234313 207 6 0.7872405 60 6 0.8172161 57 5 0.7269841 57 4 0.7306892 77 6 0.8284047 142 6 0.7114968 58 6 0.7776463 100 6 NA 0 0 0.7949472 92 6 0.7658730 62 6 0.713431 63 6 0.744330 103 6 0.723363 88 6 0.8461529 193 6 0.8819444 30 3 0.8471380 36 3 0.830093 102 6 0.775350 55 5 0.8333333 41 3 0.7615605 142 6 0.8364816 70 6 0.902778 29 3 0.732804 66 6 0.7672138 126 6 0.7959402 152 6 0.822390 252 6 0.5563725 67 6 0.5165580 97 6 0.6937695 121 6 0.914263 69 6 0.6939394 44 3 0.7932842 144 6 0.8787607 194 6 0.8406670 220 6 0.86036191 135 6 0.8367467 204 6 0.8419573 167 6 0.7799577 0.7243453 0.7163224 0.8164889 0.7086132 0.8139816 0.7625363 0.8217597 0.7622801 0.7530975 0.8162387 0.7602496 0.7538784 NA 0.7883668 0.7798499 0.6298490 0.7438712 0.7277863 0.851204 0.8314860 0.7815097 0.838068 0.7224155 0.76256158 0.7502964 0.8172769 0.8607006 0.7350457 0.7708364 0.7962191 0.7843909 0.5878489 0.4701478 0.6729933 0.913272 0.6394089 0.7922460 0.8835228 0.8195487 0.86744080 0.8546776 0.836438 3 0.784365 0.7883742 -0.01231673 6 0.784634 0.803311 -1.8677e-02 0.7921634 8.8205e-02 insignificant 1 1.0000000 insignificant 0.957798 2.4650e-03 weaklyHypometh 1 0.529143 insignificant -0.04702519 0.0163470 lowCoverage 1 lowCoverage 0.784365 0.6863469 0.09031652 6 0.784634 0.7021504 0.08248330 3.9403e-04 9.9936e-01 weaklyHypermeth 5.5498e-03 1.0000e+00 weaklyHypermeth 8.7110e-02 9.8360e-01 insignificant 8.7990e-01 1.0000e+00 insignificant 0.07386255 2.7813e-01 insignificant 1.0000e+00 insignificant 0.784365 0.8565217 -0.0731743 6 0.784634 0.8553129 -7.0679e-02 9.9998e-01 6.6213e-04 weaklyHypometh 1.0000e+00 8.2766e-02 weaklyHypometh 9.9999e-01 8.0960e-04 weaklyHypometh 1.0000e+00 1.0120e-01 insignificant -0.08313843 6.1052e-06 weaklyHypometh 0.0020351 weaklyHypometh 0.7883742 0.6863469 0.10416248 6 0.803311 0.7021504 0.1011603 1.4407e-04 9.9993e-01 weaklyHypermeth 2.1829e-03 1.0000e+00 weaklyHypermeth 5.8785e-04 9.9985e-01 weaklyHypermeth 1.4338e-02 1.0000e+00 weaklyHypermeth 0.12088774 1.0241e-01 lowCoverage 1.0000e+00 lowCoverage 0.7883742 0.8565217 -0.06725399 6 0.8033107 0.8553129 -0.0520023 9.6408e-01 4.6245e-03 weaklyHypometh 1.0000e+00 3.8537e-01 insignificant 6.9208e-01 4.2103e-02 weaklyHypometh 1.0000000 1.0000e+00 insignificant -0.0361132 0.0460983 lowCoverage 1.00000 lowCoverage 0.6863469 0.8565217 -0.1685462 6 0.7021504 0.8553129 -0.1531626 9.9997e-01 1.0382e-04 weaklyHypometh 1.0000e+00 2.8060e-03 weaklyHypometh 9.9998e-01 3.3663e-04 weaklyHypometh 1.0000e+00 1.5008e-02 weaklyHypometh -0.1570010 4.7595e-02 weaklyHypometh 0.76648757 insignificant chr11 121816450 121817450 40196 MIR100 ENSG00000207994 0.0000000 171 8 0.013333 158 8 0.0045455 241 9 0.033333 83 5 0.000000 187 8 0.0523810 214 9 0.0345525 387 10 0.0409091 173 10 0.0386473 221 8 0.0069444 205 8 0.0110981 302 9 0.0185127 341 9 0.0119767 285 9 0.0000000 1 0 0.0057143 312 8 0.0026316 364 8 0.078664 233 9 0.046296 72 4 0.006536 197 8 0.0486772 214 8 0.0584416 67 6 0.0396825 54 5 0.015758 174 8 0.024420 57 5 0.0370370 24 2 0.0037879 215 9 0.0240870 112 8 0.053030 46 4 0.039062 157 8 0.0037037 249 9 0.0087179 282 9 0.052491 239 9 0.0142857 132 9 0.0222222 157 8 0.0000000 148 8 0.000000 54 4 0.0454545 58 5 0.0568182 213 8 0.0000000 176 8 0.0833333 177 5 0.00000000 80 2 0.0000000 119 4 0.0588235 93 4 0.0000000 0.0141975 0.0037037 0.0271605 0.0000000 0.0523810 0.0167768 0.0128395 0.0312859 0.0092593 0.0129321 0.0145196 0.0104804 NA 0.0063492 0.0021442 0.0619009 0.0554184 0.0047930 0.040564 0.0730159 0.0433862 0.016611 0.0219780 0.04938272 0.0067901 0.0207661 0.0407407 0.0416667 0.0054870 0.0086610 0.0442706 0.0116402 0.0162963 0.0000000 0.000000 0.0657407 0.0092593 0.0000000 0.0629630 0.01481481 0.0000000 0.060349 0 0.013758 0.0197015 -0.00463054 9 0.024090 0.018144 5.9466e-03 0.4449664 6.2092e-01 insignificant 1 1.0000000 insignificant 0.480138 6.2146e-01 insignificant 1 1.000000 insignificant -0.00728056 0.3422803 insignificant 1 insignificant 0.013758 0.0144357 -0.00026741 8 0.024090 0.0279730 -0.00388267 7.0350e-01 6.5356e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.8529e-01 9.9529e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00039243 9.7205e-01 insignificant 1.0000e+00 insignificant 0.013787 0.0108527 -0.0050451 5 0.026499 0.0335376 -7.0381e-03 8.1276e-01 1.1738e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.9634e-01 9.8520e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00569369 7.7187e-01 lowCoverage 1.0000000 lowCoverage 0.0197015 0.0144357 0.00490014 8 0.018144 0.0279730 -0.0098293 8.8282e-01 6.3163e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.8345e-01 9.5788e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00688814 5.5288e-01 insignificant 1.0000e+00 insignificant 0.0197723 0.0108527 -0.00432623 5 0.0199582 0.0335376 -0.0135794 9.6004e-01 3.3722e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.3101e-01 9.5380e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.0015869 0.9357916 lowCoverage 1.00000 lowCoverage 0.0145119 0.0108527 -0.0110459 5 0.0307703 0.0335376 -0.0027672 9.3729e-01 4.9881e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9028e-01 8.9049e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0053013 8.0210e-01 lowCoverage 1.00000000 lowCoverage chr11 123649450 123650450 40223 OR8G5 ENSG00000197849 0.7962838 121 5 0.641533 66 5 0.5344538 55 5 0.809474 128 5 0.565714 62 5 0.6934632 143 5 0.6522727 46 5 0.6953481 84 5 0.6345455 55 5 0.5555556 39 5 0.7804682 162 5 0.6666667 12 0 0.8462573 96 5 0.7577778 25 2 0.7647619 57 5 0.5333333 15 0 0.600000 5 0 0.731052 102 5 0.702198 72 5 0.7126961 164 5 0.8114286 31 5 0.7957576 54 5 0.776619 84 5 0.763232 51 5 0.8138889 36 5 0.7372483 111 5 0.8758974 65 5 0.833333 14 1 0.638915 89 5 0.7771491 85 5 0.7187831 131 5 0.691101 155 5 0.8090127 86 5 0.7300000 66 5 0.7088973 110 5 1.000000 10 0 0.6586325 56 5 0.5864447 105 5 0.6993979 79 5 0.7625000 72 5 0.75904385 110 5 0.7880952 36 5 0.6817766 92 5 0.8168341 0.6771724 0.5980761 0.8579640 0.6265038 0.7459957 0.7196471 0.7323008 0.6522727 0.6257310 0.7960200 0.7061404 0.8413704 0.7961988 0.8100251 0.5701754 0.7105263 0.7854030 0.7289618 0.762576 0.8522556 0.8206140 0.811819 0.8071239 0.86531433 0.7725613 0.8496626 0.8530702 0.7058498 0.7800352 0.7372772 0.7238232 0.8177901 0.7756579 0.7242247 1.000000 0.6827823 0.6335820 0.7376919 0.8059211 0.79129890 0.8269110 0.746301 1 0.733598 0.7538631 -0.02731399 5 0.717247 0.748583 -3.1336e-02 0.8625867 1.1494e-01 insignificant 1 1.0000000 insignificant 0.990255 4.5234e-03 weaklyHypometh 1 0.529143 insignificant -0.08575338 0.0049509 lowCoverage 1 lowCoverage 0.733598 0.7136259 0.01734038 5 0.717247 0.7041060 0.01314144 1.8863e-01 8.1331e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.6748e-01 1.2127e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.06513846 3.3392e-01 lowCoverage 1.0000e+00 lowCoverage 0.733598 0.7609254 -0.0211941 5 0.717247 0.7351866 -1.7939e-02 8.6760e-01 2.8056e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7292e-01 2.1949e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.05446997 8.3248e-02 lowCoverage 1.0000000 lowCoverage 0.7538631 0.7136259 0.04448807 5 0.748583 0.7041060 0.0444772 7.0623e-02 9.8675e-01 insignificant 5.9850e-01 1.0000e+00 insignificant 3.0458e-01 8.9415e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02061493 7.4913e-01 lowCoverage 1.0000e+00 lowCoverage 0.7538631 0.7609254 0.00636596 5 0.7485832 0.7351866 0.0133965 2.7618e-01 2.3265e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.1132e-01 4.2297e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.0312834 0.2820974 lowCoverage 1.00000 lowCoverage 0.7136259 0.7609254 -0.0384414 5 0.7041060 0.7351866 -0.0310807 8.6370e-01 5.8265e-02 insignificant 1.0000e+00 5.8501e-01 insignificant 7.0163e-01 3.3805e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0106685 8.6898e-01 lowCoverage 1.00000000 lowCoverage chr11 124121750 124122750 40228 NRGN ENSG00000154146 0.0962072 262 11 0.012253 239 11 0.0131022 356 11 0.083333 181 9 0.008585 251 12 0.0074786 351 12 0.0774621 420 11 0.0796550 349 11 0.0146723 381 11 0.0022321 489 11 0.1812925 355 11 0.0157499 379 11 0.0077507 380 11 0.0085369 218 6 0.0127646 411 11 0.0000000 288 11 0.032702 195 7 0.025974 307 11 0.095668 280 11 0.0922515 295 12 0.0070208 161 12 0.0677910 137 8 0.086099 306 11 0.000000 175 10 0.0000000 108 4 0.0415336 378 11 0.0042735 361 11 0.056078 146 10 0.015135 339 11 0.0859435 429 11 0.1060724 371 11 0.016753 409 12 0.0046296 277 11 0.0011111 411 11 0.0335648 262 10 0.000000 58 6 0.0895238 139 10 0.1508579 361 11 0.0511948 379 11 0.0322421 229 11 0.07225914 239 9 0.0094519 340 11 0.0921138 192 9 0.0180440 0.0115604 0.0105713 0.0116434 0.0220490 0.0144753 0.0136023 0.0206629 0.0198136 0.0025574 0.0086874 0.0189926 0.0104926 0.0128464 0.0075884 0.0000000 0.0135536 0.0057029 0.0259639 0.016076 0.0165700 0.0400073 0.021703 0.0000000 0.00000000 0.0251400 0.0029940 0.0519745 0.0305010 0.0189224 0.0213553 0.0110087 0.0029940 0.0047372 0.0281382 0.000000 0.0203023 0.0170725 0.0250059 0.0056395 0.00413127 0.0119990 0.050677 7 0.013621 0.0181105 -0.00385778 11 0.101866 0.035018 6.6848e-02 0.6745840 3.0639e-01 insignificant 1 1.0000000 insignificant 0.424148 6.9329e-01 insignificant 1 1.000000 insignificant 0.00282522 0.8568465 insignificant 1 insignificant 0.013632 0.0278515 -0.00705256 11 0.108657 0.1044423 0.00421466 1.2532e-01 9.0916e-01 insignificant 9.8677e-01 1.0000e+00 insignificant 7.5836e-02 9.9980e-01 insignificant 8.0677e-01 1.0000e+00 insignificant -0.00323099 9.0919e-01 insignificant 1.0000e+00 insignificant 0.013632 0.0196793 -0.0059190 9 0.108657 0.0654088 4.3248e-02 8.8890e-01 3.8739e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.3089e-01 8.7092e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00806879 6.6629e-01 insignificant 1.0000000 insignificant 0.0178517 0.0278515 -0.00586847 11 0.029019 0.1044423 -0.0754234 2.8176e-01 7.8420e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.5767e-01 8.8609e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00605622 8.3163e-01 insignificant 1.0000e+00 insignificant 0.0181214 0.0195794 -0.00301116 9 0.0492255 0.0516385 -0.0024130 9.8192e-01 6.8621e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7346e-01 9.5550e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.0108940 0.5663651 insignificant 1.00000 insignificant 0.0278515 0.0196793 -0.0045264 9 0.1044423 0.0654088 0.0390335 9.9736e-01 4.0745e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9931e-01 5.0151e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0048378 8.7170e-01 insignificant 1.00000000 insignificant chr11 124809850 124810850 40237 ENSG00000222844 0.6741386 217 9 0.648084 207 7 0.6336727 66 3 0.746638 152 9 0.678571 37 3 0.7489448 274 9 0.6194756 70 6 0.7485778 165 8 0.7676932 79 6 0.7888889 92 6 0.6828951 235 9 0.8333333 14 0 0.7496032 121 5 0.3500000 16 2 0.6485294 57 4 0.3333333 11 0 0.458333 14 0 0.652159 239 8 0.785766 181 9 0.6571485 221 9 0.8253968 71 6 0.7261905 38 2 0.772884 121 6 0.610847 80 7 0.6045089 81 7 0.6942093 332 9 0.5786848 70 5 0.518519 20 1 0.767935 197 7 0.6785192 261 9 0.7238418 252 9 0.700061 316 9 0.6882121 161 9 0.4817019 113 7 0.6693609 213 8 0.670996 47 4 0.6179431 75 7 0.6727688 254 9 0.7001684 156 7 0.6866149 202 9 0.64228814 187 9 0.5714787 170 5 0.6427853 149 9 0.6399974 0.6608541 0.6040965 0.7047964 0.6542553 0.7259328 0.5550241 0.6180573 0.5896803 0.7031915 0.6675803 0.8404255 0.6263931 0.5551265 0.6007822 0.5000000 0.7170128 0.6566720 0.7431817 0.609680 0.7677812 0.6197515 0.672809 0.6507092 0.58452051 0.6800499 0.5736238 0.6897163 0.7114085 0.6641191 0.6815377 0.6494499 0.6499859 0.4547661 0.7293766 0.600488 0.5522122 0.6429538 0.6081238 0.6992856 0.62069360 0.6192443 0.661717 1 0.683144 0.7453754 -0.00682237 9 0.721979 0.727697 -5.7179e-03 0.7821610 7.9701e-01 insignificant 1 1.0000000 insignificant 0.583658 8.3721e-01 insignificant 1 1.000000 insignificant -0.02317707 0.5667894 insignificant 1 insignificant 0.683144 0.6964079 0.03717399 9 0.721979 0.6837611 0.03821834 1.5370e-02 9.8335e-01 weaklyHypermeth 1.6010e-01 1.0000e+00 insignificant 6.8225e-02 9.9652e-01 insignificant 7.5805e-01 1.0000e+00 insignificant 0.02679220 5.5260e-01 insignificant 1.0000e+00 insignificant 0.683016 0.5752315 0.0294584 9 0.691088 0.6506722 4.0416e-02 1.2709e-01 8.6552e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.4705e-01 9.5137e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01162219 7.6230e-01 insignificant 1.0000000 insignificant 0.7453754 0.6964079 0.04303689 9 0.727697 0.6837611 0.0439362 6.7647e-02 9.8377e-01 insignificant 5.7818e-01 1.0000e+00 insignificant 2.0403e-01 9.9709e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.04996927 2.4852e-01 insignificant 1.0000e+00 insignificant 0.7452368 0.5752315 0.02996639 9 0.6974414 0.6506722 0.0467692 9.1370e-02 8.5554e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.0717e-01 9.3775e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.0347993 0.3290967 insignificant 1.00000 insignificant 0.6960557 0.5752315 -0.0128225 9 0.6486234 0.6506722 -0.0020488 4.1433e-01 1.4732e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.9483e-01 3.0461e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0151700 7.0700e-01 insignificant 1.00000000 insignificant chr11 124827550 124828550 40239 ENSG00000222844 0.8137464 87 6 0.641665 98 6 0.5952381 29 2 0.733796 100 6 0.750000 33 6 0.6376150 102 6 0.6067251 53 2 0.7611111 64 6 0.5964286 38 6 0.6738095 20 1 0.7059829 142 6 0.7500000 8 0 0.6909091 63 6 0.8392857 53 6 0.7166667 32 6 0.5821429 31 3 1.000000 4 0 0.483097 63 2 0.785714 34 6 0.6608974 39 2 0.9166667 9 0 0.5000000 2 0 0.587500 36 6 0.625000 28 2 0.9393939 26 2 0.8097070 83 6 0.7194444 21 2 0.500000 6 0 0.599057 63 6 0.7311355 87 6 0.6349715 69 6 0.829521 73 6 0.6527778 78 6 0.7424242 66 6 0.6982323 70 6 0.333333 6 0 0.5620370 55 4 0.6456427 73 6 0.7500000 88 6 0.8424242 90 6 0.77727273 92 6 0.6626263 61 4 0.6997585 67 6 0.7887637 0.6442041 0.6017316 0.7392677 0.7575758 0.7464604 0.6105795 0.7589226 0.7015152 0.7828283 0.7071621 0.7334827 0.8085399 0.8219697 0.7131313 0.5854978 0.9153009 0.4754510 0.7766234 0.664452 0.9090909 0.6703490 0.596970 0.6262626 0.94490358 0.8156621 0.7252525 0.4848485 0.7044758 0.7264291 0.6378529 0.8368390 0.6611111 0.7493113 0.7077594 0.568620 0.5589226 0.6518320 0.7523810 0.8477961 0.78374656 0.6625344 0.697760 0 0.724265 0.7296223 -0.00296154 6 0.762885 0.621932 1.4095e-01 0.7364199 6.9876e-01 insignificant 1 1.0000000 insignificant 0.786481 3.7994e-01 insignificant 1 1.000000 insignificant 0.00187517 0.9705190 lowCoverage 1 lowCoverage 0.723757 0.6695402 0.05669743 6 0.723366 0.6750345 0.04833140 2.9973e-02 9.6540e-01 weaklyHypermeth 2.8012e-01 1.0000e+00 insignificant 1.8025e-02 9.7989e-01 weaklyHypermeth 2.5387e-01 1.0000e+00 insignificant 0.09550035 1.8510e-01 lowCoverage 1.0000e+00 lowCoverage 0.723757 0.7562814 -0.0368653 6 0.723366 0.7662080 -4.2842e-02 9.7298e-01 2.1874e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.5382e-01 3.2558e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04517475 2.8538e-01 lowCoverage 1.0000000 lowCoverage 0.7310757 0.6695402 0.05888969 6 0.725588 0.6750345 0.0505532 6.1280e-02 9.1335e-01 insignificant 5.3287e-01 1.0000e+00 insignificant 1.8361e-02 9.8618e-01 weaklyHypermeth 2.4481e-01 1.0000e+00 insignificant 0.09362517 2.3233e-01 lowCoverage 1.0000e+00 lowCoverage 0.7310757 0.7562814 -0.03343012 6 0.7255877 0.7662080 -0.0406203 9.0338e-01 1.7824e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.1806e-01 7.1581e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.0470499 0.3917052 lowCoverage 1.00000 lowCoverage 0.6695402 0.7562814 -0.0933589 6 0.6750345 0.7662080 -0.0911735 9.9869e-01 1.6575e-02 weaklyHypometh 1.0000e+00 1.9970e-01 insignificant 9.9919e-01 2.5898e-02 weaklyHypometh 1.0000e+00 4.0466e-01 insignificant -0.1406751 7.3091e-02 lowCoverage 1.00000000 lowCoverage chr11 125721650 125722650 40263 ENSG00000209272 0.8954545 69 5 0.829351 69 5 0.8120664 66 5 0.916770 77 5 0.898232 47 5 0.8253268 173 5 0.9078788 88 5 0.8458333 63 5 0.8222360 115 5 0.8224090 91 5 0.8259056 84 5 0.8533333 35 5 0.8225242 93 5 0.9083333 33 5 0.7637229 62 5 0.9400000 48 5 0.883280 91 5 0.836631 79 5 0.530000 19 2 0.9204989 176 5 1.0000000 29 5 0.8786813 80 5 0.856970 63 5 0.664762 45 4 0.9056277 44 5 0.8790008 109 5 0.7623532 89 5 0.828333 41 4 0.633333 30 3 0.8865413 132 5 0.9262375 64 5 0.857611 198 5 0.4381216 101 5 0.2519608 32 1 0.2413652 232 5 0.633333 16 1 0.4868864 108 5 0.7161788 102 5 0.9151515 64 5 0.9355556 44 5 0.84761905 46 5 0.8992063 39 5 0.8176587 55 5 0.8931148 0.8003446 0.7854732 0.9149449 0.8898251 0.8393407 0.8934859 0.8406179 0.8268123 0.8258065 0.8158036 0.8390023 0.8109698 0.9180839 0.7802662 0.9448980 0.8790915 0.8412547 0.5442177 0.925459 1.0000000 0.8784780 0.853426 0.6772271 0.90903201 0.8806351 0.7625311 0.8390023 0.6581633 0.8713491 0.9219459 0.8570654 0.4041134 0.2685407 0.2132331 0.608844 0.5001395 0.6888024 0.8960524 0.9358277 0.84094590 0.8964070 0.824013 3 0.855513 0.8560606 -0.00147387 5 0.854676 0.854976 -2.9947e-04 0.7101767 6.2823e-01 insignificant 1 1.0000000 insignificant 0.670157 3.2628e-01 insignificant 1 1.000000 insignificant 0.00303509 0.9339853 lowCoverage 1 lowCoverage 0.855513 0.4094755 0.44392130 5 0.854676 0.4220169 0.43265951 3.0500e-23 9.9983e-01 hypermethylated 1.6945e-21 1.0000e+00 hypermethylated 3.2633e-09 9.9988e-01 hypermethylated 2.7423e-07 1.0000e+00 hypermethylated 0.38168169 4.0190e-03 lowCoverage 1.1164e-01 lowCoverage 0.855513 0.8709677 -0.0183865 5 0.854676 0.8842837 -2.9607e-02 8.7727e-01 4.5286e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.5845e-01 9.9535e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04004886 1.9812e-01 lowCoverage 1.0000000 lowCoverage 0.8560606 0.4094755 0.45381641 5 0.854976 0.4220169 0.4329590 1.7548e-16 9.9951e-01 hypermethylated 9.2357e-15 1.0000e+00 hypermethylated 4.4333e-09 9.9993e-01 hypermethylated 7.3889e-07 1.0000e+00 hypermethylated 0.37864660 3.4685e-03 lowCoverage 1.0839e-01 lowCoverage 0.8560606 0.8709677 -0.01871378 5 0.8549759 0.8842837 -0.0293078 8.2285e-01 3.0884e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.6001e-01 3.2800e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.0430839 0.2694567 lowCoverage 1.00000 lowCoverage 0.4094755 0.8709677 -0.4896986 5 0.4220169 0.8842837 -0.4622668 1.0000e+00 4.2671e-09 hypomethylated 1.0000e+00 2.2458e-07 hypomethylated 1.0000e+00 1.4540e-06 hypomethylated 1.0000e+00 2.0772e-04 hypomethylated -0.4217306 2.4326e-03 lowCoverage 0.11057141 lowCoverage chr11 125738950 125739950 40265 ST3GAL4 ENSG00000110080 0.8116902 289 7 0.627832 201 7 0.8288917 174 7 0.777349 202 6 0.602843 103 7 0.8233871 366 7 0.6550285 164 7 0.6984305 215 7 0.6964657 149 6 0.7840434 127 7 0.8263832 246 7 0.7439267 82 4 0.5703418 134 4 0.8625000 38 6 0.5280117 124 7 0.7022183 60 7 0.602339 50 3 0.713691 362 7 0.471573 280 7 0.6418038 211 7 0.7493073 119 7 0.3349567 38 3 0.623881 165 7 0.666667 47 4 0.7235762 317 6 0.7435744 318 7 0.6507939 124 6 0.759954 46 3 0.726078 258 7 0.6216433 320 7 0.5036511 326 7 0.808061 247 7 0.2620451 245 7 0.3512633 259 7 0.6399231 205 7 0.350041 205 7 0.4421787 198 8 0.2030292 452 7 0.3762795 249 7 0.5633998 240 7 0.48339463 171 6 0.4799084 320 7 0.6275964 145 7 0.8449090 0.6492049 0.8397699 0.8130551 0.6164852 0.8341924 0.7846978 0.8301252 0.7970182 0.7841603 0.7871360 0.8122017 0.6473715 0.8467012 0.7167512 0.7951356 0.7414304 0.6998430 0.5878954 0.697124 0.8481102 0.5091597 0.718680 0.7922591 0.73784079 0.7375739 0.7805863 0.7854929 0.7926043 0.7424577 0.7242577 0.8376884 0.2506668 0.3262950 0.6747947 0.284154 0.4384779 0.2378655 0.4953087 0.6142368 0.52047304 0.5893911 0.627865 3 0.744199 0.7709858 -0.02288636 7 0.700442 0.719789 -1.9347e-02 0.7395023 1.4214e-01 insignificant 1 1.0000000 insignificant 0.434183 6.4527e-01 insignificant 1 1.000000 insignificant 0.03909229 0.3959562 insignificant 1 insignificant 0.744199 0.3670077 0.39358943 7 0.700442 0.3747078 0.32573392 2.6825e-32 9.9988e-01 hypermethylated 2.9805e-30 1.0000e+00 hypermethylated 1.8155e-10 1.0000e+00 hypermethylated 3.6310e-08 1.0000e+00 hypermethylated 0.32369072 2.2982e-03 weaklyHypermeth 7.1818e-02 weaklyHypermeth 0.744199 0.5368889 0.1909984 7 0.700442 0.5334210 1.6702e-01 5.2717e-12 9.9609e-01 weaklyHypermeth 2.6358e-09 1.0000e+00 weaklyHypermeth 1.3247e-07 9.9679e-01 weaklyHypermeth 6.6233e-05 1.0000e+00 weaklyHypermeth 0.19232177 5.8216e-03 weaklyHypermeth 0.3064024 insignificant 0.7709858 0.3670077 0.42237409 7 0.719789 0.3747078 0.3450813 1.2763e-24 9.9199e-01 hypermethylated 1.5954e-22 1.0000e+00 hypermethylated 1.1192e-07 9.9939e-01 hypermethylated 8.6095e-06 1.0000e+00 hypermethylated 0.28459844 3.9057e-03 weaklyHypermeth 1.1835e-01 insignificant 0.7709858 0.5368889 0.20943381 7 0.7197891 0.5334210 0.1863681 8.0464e-13 9.9489e-01 hypermethylated 4.0232e-10 1.0000e+00 hypermethylated 4.2835e-06 9.9601e-01 hypermethylated 0.0021417 1.0000e+00 hypermethylated 0.1532295 0.0216951 weaklyHypermeth 0.86780 insignificant 0.3670077 0.5368889 -0.1776376 7 0.3747078 0.5334210 -0.1587132 2.8343e-01 2.6042e-10 weaklyHypometh 1.0000e+00 1.7362e-08 weaklyHypometh 5.7493e-01 8.9190e-04 weaklyHypometh 1.0000e+00 2.8771e-02 weaklyHypometh -0.1313690 1.1942e-01 insignificant 1.00000000 insignificant chr11 125740950 125741950 40266 ST3GAL4 ENSG00000110080 0.8387049 149 4 0.770564 112 5 0.7273830 123 5 0.724225 177 4 0.816080 86 3 0.6989722 281 5 0.7896303 64 5 0.8314581 149 5 0.8479853 77 3 0.8685924 153 5 0.8330857 170 5 0.6141026 42 3 0.6149623 143 3 0.8099707 105 5 0.7684982 140 3 0.7777778 15 0 1.000000 3 0 0.811299 204 4 0.811114 198 4 0.6709938 161 5 0.7521839 87 3 0.3919306 59 3 0.803910 158 5 0.867593 66 5 0.7064103 43 2 0.5500583 182 5 0.8065535 184 3 0.726923 47 3 0.875107 209 5 0.7989648 185 5 0.7088057 138 5 0.890775 183 5 0.4733415 137 5 0.5643933 189 3 0.5555556 132 3 0.541667 81 4 0.4492112 124 3 0.4276547 250 5 0.6279037 157 4 0.6144082 169 4 0.50078577 128 4 0.5280806 156 4 0.7330725 130 5 0.7726937 0.5227751 0.7127722 0.6806995 0.6194111 0.7931588 0.6281352 0.7350575 0.7576067 0.7186730 0.7545217 0.5285079 0.4794445 0.6914190 0.6373810 0.8944724 0.8037490 0.5939483 0.7106850 0.582736 0.8627176 0.2950480 0.803801 0.7145449 0.63709574 0.6312051 0.6374893 0.6290942 0.8015509 0.5598500 0.6379956 0.8362542 0.2842990 0.3302454 0.6463797 0.352596 0.3411737 0.2531667 0.4535882 0.3833192 0.39097057 0.3951362 0.512741 3 0.694270 0.7191157 -0.01929919 5 0.803639 0.807764 -4.1245e-03 0.8180661 1.2453e-01 insignificant 1 1.0000000 insignificant 0.610356 4.8300e-01 insignificant 1 1.000000 insignificant 0.04133542 0.3843826 lowCoverage 1 lowCoverage 0.694270 0.3355263 0.34815643 4 0.803639 0.5181861 0.28545290 5.1967e-16 9.9736e-01 lowCoverage 1.9247e-14 1.0000e+00 lowCoverage 1.5979e-05 9.9890e-01 lowCoverage 5.7069e-04 1.0000e+00 lowCoverage 0.27929954 8.0878e-07 lowCoverage 7.1749e-05 lowCoverage 0.694270 0.4479026 0.2434071 4 0.803639 0.7072149 9.6424e-02 6.1683e-08 9.9277e-01 lowCoverage 7.7104e-06 1.0000e+00 lowCoverage 4.1877e-05 9.9442e-01 lowCoverage 5.2352e-03 1.0000e+00 lowCoverage 0.18041986 7.3819e-03 lowCoverage 0.3355388 lowCoverage 0.7181818 0.3351588 0.35567349 4 0.706793 0.4534129 0.2533802 1.2135e-09 9.9961e-01 lowCoverage 3.2797e-08 1.0000e+00 lowCoverage 2.9785e-04 9.9959e-01 lowCoverage 8.2737e-03 1.0000e+00 lowCoverage 0.23796412 1.5393e-04 lowCoverage 7.6963e-03 lowCoverage 0.7181818 0.4472973 0.25528514 4 0.7067931 0.6188130 0.0879801 7.6087e-06 9.8843e-01 lowCoverage 6.3406e-04 1.0000e+00 lowCoverage 2.8759e-03 9.8768e-01 lowCoverage 0.1797467 1.0000e+00 lowCoverage 0.1390844 0.0350371 lowCoverage 1.00000 lowCoverage 0.3351588 0.4472973 -0.1198386 4 0.4534129 0.6188130 -0.1654001 9.9938e-01 1.7809e-02 lowCoverage 1.0000e+00 2.0952e-01 lowCoverage 9.9998e-01 7.4530e-02 lowCoverage 1.0000e+00 9.0840e-01 lowCoverage -0.0988797 7.8839e-02 lowCoverage 1.00000000 lowCoverage chr11 125960650 125961650 40274 KIRREL3 ENSG00000149571 0.7877166 165 8 0.532322 254 8 0.6191026 260 8 0.832680 60 5 0.791667 94 8 0.8639187 208 8 0.6266504 212 8 0.8292197 173 8 0.7255133 189 8 0.7517234 161 8 0.7081504 240 8 0.7348795 196 7 0.6309475 265 8 0.7500000 16 2 0.7222070 168 8 0.8146695 118 7 0.629755 153 7 0.431220 90 8 0.678353 180 7 0.7289133 267 8 0.6531611 156 8 0.7922794 40 2 0.723741 151 8 0.706241 94 8 0.4508929 34 2 0.7887277 275 8 0.7257937 110 8 0.576687 47 4 0.700631 202 7 0.7303169 288 8 0.7906831 267 8 0.755349 301 8 0.1449093 286 8 0.1259550 189 7 0.0205128 313 4 0.093040 67 6 0.0978594 80 8 0.3662632 236 8 0.5613367 168 7 0.6010475 158 8 0.56349206 70 8 0.6889642 164 7 0.5574566 93 8 0.8036283 0.5259078 0.5937228 0.8030773 0.7973297 0.8563649 0.6491770 0.8150397 0.6982589 0.7564498 0.7300539 0.7539026 0.6041714 0.6927722 0.6920946 0.8155318 0.6749841 0.4627533 0.7393067 0.745551 0.7049447 0.7581189 0.732848 0.7256524 0.54761905 0.7818842 0.8272197 0.6350033 0.7150638 0.7084695 0.7590298 0.7730668 0.1548758 0.1320862 0.0519306 0.103684 0.1090855 0.3791544 0.5673388 0.6236920 0.55472884 0.6373625 0.566045 4 0.705391 0.7580234 -0.05226071 8 0.700812 0.743288 -4.2476e-02 0.9899681 1.2776e-02 weaklyHypometh 1 0.9827723 insignificant 0.437832 2.9609e-01 insignificant 1 1.000000 insignificant 0.00993847 0.7931540 insignificant 1 insignificant 0.705391 0.1709402 0.50603668 8 0.700812 0.1732723 0.52753968 1.9411e-48 1.0000e+00 hypermethylated 9.7053e-46 1.0000e+00 hypermethylated 1.3472e-17 1.0000e+00 hypermethylated 1.3472e-14 1.0000e+00 hypermethylated 0.56805715 7.7639e-06 hypermethylated 5.1760e-04 hypermethylated 0.705391 0.5819296 0.1153175 8 0.700812 0.6045726 9.6239e-02 3.4049e-06 8.6273e-01 weaklyHypermeth 2.7385e-04 1.0000e+00 weaklyHypermeth 3.5402e-05 8.3807e-01 weaklyHypermeth 5.2352e-03 1.0000e+00 weaklyHypermeth 0.11502099 5.6977e-03 weaklyHypermeth 0.3064024 insignificant 0.7577608 0.1707942 0.55207592 8 0.716256 0.1540198 0.5622361 1.5615e-45 1.0000e+00 hypermethylated 1.5615e-42 1.0000e+00 hypermethylated 3.2227e-14 1.0000e+00 hypermethylated 1.5843e-11 1.0000e+00 hypermethylated 0.55811869 4.8264e-06 hypermethylated 3.4474e-04 hypermethylated 0.7580234 0.5819296 0.16267303 8 0.7432879 0.6045726 0.1387153 1.9633e-10 8.9496e-01 weaklyHypermeth 6.5443e-08 1.0000e+00 weaklyHypermeth 1.6192e-05 6.1722e-01 weaklyHypermeth 0.0053975 1.0000e+00 weaklyHypermeth 0.1050825 0.0159604 weaklyHypermeth 0.76002 insignificant 0.1709402 0.5819296 -0.4289598 8 0.1732723 0.6045726 -0.4313003 1.0000e+00 2.1618e-19 hypomethylated 1.0000e+00 4.3236e-17 hypomethylated 1.0000e+00 7.3781e-10 hypomethylated 1.0000e+00 2.4594e-07 hypomethylated -0.4530362 5.1620e-05 hypomethylated 0.00645247 hypomethylated chr11 127999450 128000450 40310 ETS1 ENSG00000134954 0.3950576 141 5 0.490167 113 2 0.6679957 46 2 0.612500 111 6 0.317982 37 2 0.7207447 104 5 0.5062500 21 1 0.8202138 81 2 0.4028571 55 5 0.3531746 68 5 0.5426899 149 7 0.4741162 37 2 0.4062500 87 2 0.5155844 37 2 0.5993642 119 5 0.4122449 43 5 0.500000 3 0 0.623444 111 4 0.523952 83 4 0.5253190 109 5 0.5833333 31 2 0.7665317 41 2 0.524820 59 5 0.482993 36 1 0.9388889 21 2 0.6710389 90 3 0.5190362 82 5 0.535714 33 2 0.642105 63 2 0.5634259 100 2 0.4519329 62 2 0.645922 113 6 0.9571429 42 4 0.7653061 52 5 0.5000000 31 1 NA 0 0 0.5979222 64 2 0.7214963 92 5 0.5459707 152 6 0.7090742 129 7 0.59108852 121 6 0.5596899 88 5 0.7858360 124 6 0.4635822 0.2069552 0.3188306 0.3406780 0.2396670 0.6920603 0.1101695 0.4454053 0.1520581 0.2871940 0.4774642 0.2392570 0.2669492 0.2853621 0.1731372 0.2106538 NA 0.5619277 0.5014657 0.338503 0.0974576 0.6268213 0.471402 0.1876513 0.83841808 0.5563744 0.2459328 0.0974576 0.3893845 0.4851628 0.5208762 0.6194196 0.8677966 0.9370460 0.8973714 NA 0.8375219 0.7584204 0.4911219 0.6564967 0.40278972 0.4126265 0.499219 2 0.445659 0.5191781 -0.08158904 2 0.577940 0.554651 2.3289e-02 0.8211607 1.9800e-01 lowCoverage 1 1.0000000 lowCoverage 0.873206 8.8960e-02 lowCoverage 1 1.000000 lowCoverage -0.08998317 0.0766066 lowCoverage 1 lowCoverage 0.445659 0.8362989 -0.40262040 2 0.577940 0.7035827 -0.12564322 8.8164e-01 5.5658e-08 lowCoverage 1.0000e+00 1.8553e-05 lowCoverage 9.4051e-01 7.1721e-05 lowCoverage 1.0000e+00 2.3907e-02 lowCoverage -0.18787814 7.1240e-02 lowCoverage 9.6011e-01 lowCoverage 0.445659 0.6225490 -0.1405804 5 0.577940 0.6243280 -4.6388e-02 9.1694e-01 6.1683e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3781e-01 4.7330e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.11783651 6.6582e-02 lowCoverage 1.0000000 lowCoverage 0.5191781 0.8362989 -0.32269281 2 0.554651 0.7035827 -0.1489320 9.9939e-01 2.5599e-05 lowCoverage 1.0000e+00 6.3997e-03 lowCoverage 9.9899e-01 3.6633e-03 lowCoverage 1.0000e+00 6.5836e-01 lowCoverage -0.09789497 3.0303e-01 lowCoverage 1.0000e+00 lowCoverage 0.5191781 0.6225490 -0.04234168 2 0.5546507 0.6243280 -0.0696772 9.6928e-01 1.4941e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.7071e-01 4.2194e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage -0.0278533 0.6581890 lowCoverage 1.00000 lowCoverage 0.8362989 0.6225490 0.2860164 2 0.7035827 0.6243280 0.0792548 1.1833e-04 9.4795e-01 lowCoverage 1.6905e-02 1.0000e+00 lowCoverage 5.9682e-03 9.8887e-01 lowCoverage 6.6314e-01 1.0000e+00 lowCoverage 0.0700416 4.6702e-01 lowCoverage 1.00000000 lowCoverage chr11 130236550 130237550 40370 C11orf44 ENSG00000175728 0.2703282 589 17 0.186117 552 15 0.2483009 589 17 0.246279 281 15 0.281487 431 13 0.3301982 613 17 0.1872469 535 14 0.2606861 510 17 0.2302626 596 15 0.2615730 560 15 0.2693779 551 17 0.1181599 595 14 0.2390992 524 17 NA 0 0 0.2357952 535 15 0.0181861 498 12 0.084870 734 14 0.219968 366 17 0.196537 356 13 0.2711448 602 17 0.2901471 110 8 0.2397043 175 15 0.317704 455 15 0.132082 196 11 0.3444981 101 7 0.2542038 651 17 0.2306022 184 15 0.091246 96 8 0.218106 354 15 0.2774242 701 17 0.2458261 586 15 0.260662 687 17 0.2204758 594 17 0.2501752 407 15 0.2800000 312 8 0.085470 142 11 0.2628008 151 11 0.1938728 637 17 0.2748917 687 15 0.2765934 701 15 0.09420513 425 15 0.2042370 611 15 0.2451257 499 16 0.0897134 0.0669654 0.0772875 0.0670079 0.0832417 0.1424332 0.0885665 0.0726789 0.0587066 0.0756697 0.0940587 0.0864919 0.0639835 NA 0.0595824 0.0658873 0.0361619 0.0616564 0.0779087 0.098811 0.0923909 0.0820391 0.115677 0.0501009 0.09991397 0.0698776 0.1202239 0.0800028 0.0726733 0.0627555 0.0672199 0.0941886 0.0467536 0.0626745 0.0450339 0.046492 0.1020788 0.0450887 0.0586224 0.0746101 0.04301001 0.0503984 0.076110 8 0.108116 0.1364060 -0.00211363 17 0.250232 0.253723 -3.4908e-03 0.8732724 2.0887e-01 insignificant 1 1.0000000 insignificant 0.634251 5.4251e-01 insignificant 1 1.000000 insignificant -0.02313389 0.3966328 insignificant 1 insignificant 0.108116 0.0896121 0.02367205 16 0.250232 0.2175900 0.03264189 1.7540e-05 7.8440e-01 weaklyHypermeth 2.8753e-04 1.0000e+00 weaklyHypermeth 3.2133e-05 8.7240e-01 weaklyHypermeth 1.0042e-03 1.0000e+00 weaklyHypermeth 0.00325087 9.2508e-01 insignificant 1.0000e+00 insignificant 0.108116 0.1214506 0.0166040 15 0.250232 0.2482835 1.9484e-03 2.6072e-02 6.1449e-01 weaklyHypermeth 7.9006e-01 1.0000e+00 insignificant 1.8161e-02 7.7462e-01 weaklyHypermeth 6.7261e-01 1.0000e+00 insignificant -0.00029395 9.9406e-01 insignificant 1.0000000 insignificant 0.1364060 0.0896121 0.02820567 16 0.253723 0.2175900 0.0361327 2.3567e-05 9.3371e-01 weaklyHypermeth 4.2848e-04 1.0000e+00 weaklyHypermeth 2.6485e-03 9.4288e-01 weaklyHypermeth 4.9971e-02 1.0000e+00 weaklyHypermeth 0.02638476 4.7349e-01 insignificant 1.0000e+00 insignificant 0.1364060 0.1214506 0.01700939 15 0.2537228 0.2482835 0.0054392 7.0184e-02 9.5313e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.0726e-01 8.7073e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.0228399 0.5818768 insignificant 1.00000 insignificant 0.0896121 0.1214506 -0.0110409 15 0.2175900 0.2482835 -0.0306935 9.2757e-01 2.9563e-04 weaklyHypometh 1.0000e+00 6.7842e-03 weaklyHypometh 9.6748e-01 5.3779e-03 weaklyHypometh 1.0000e+00 1.1951e-01 insignificant -0.0035448 9.3836e-01 insignificant 1.00000000 insignificant chr12 179150 180150 40391 IQSEC3 ENSG00000120645 0.8202876 249 9 0.736715 202 11 0.6201416 132 7 0.749832 212 11 0.879523 67 5 0.7845578 344 11 0.5906903 100 8 0.7010188 173 8 0.7681208 100 7 0.7204847 112 7 0.6624581 301 11 0.7784091 61 5 0.6699729 113 10 0.7357143 39 4 0.7473214 111 7 0.7615385 46 2 0.616117 58 4 0.728750 195 9 0.814533 208 8 0.7061702 347 11 0.6498810 51 6 0.8088203 88 10 0.830584 146 11 0.783929 48 5 0.7881494 81 8 0.7390778 252 11 0.7598156 92 9 0.734615 50 3 0.916832 121 8 0.6988706 252 11 0.7954766 220 11 0.644312 374 11 0.7573289 170 11 0.5772228 113 7 0.5631747 176 10 0.789683 56 4 0.6813568 92 7 0.6821341 262 11 0.7919878 242 8 0.7360412 196 8 0.77033546 216 8 0.7944383 196 8 0.8557847 268 8 0.8613267 0.7489406 0.6253364 0.8798254 0.8296983 0.8108729 0.7647152 0.8495982 0.8344659 0.8155281 0.8376058 0.8153226 0.8561836 0.8148957 0.7817612 0.8662773 0.8217798 0.8102729 0.8330990 0.829569 0.8459347 0.8620993 0.854281 0.8065456 0.82234352 0.8241580 0.7642025 0.8756039 0.8772736 0.8206135 0.8116975 0.7843255 0.8160312 0.7529778 0.7036594 0.859483 0.8778180 0.8443040 0.8730388 0.8218773 0.86412294 0.8604588 0.842579 3 0.794322 0.7971831 -0.01019917 8 0.713332 0.761532 -4.8200e-02 0.6770682 1.5782e-01 insignificant 1 1.0000000 insignificant 0.675184 4.8051e-02 weaklyHypometh 1 1.000000 insignificant -0.03291246 0.2436262 insignificant 1 insignificant 0.794322 0.7146145 0.06128110 8 0.713332 0.6813927 0.03193909 7.9340e-04 3.6100e-01 weaklyHypermeth 1.0440e-02 1.0000e+00 weaklyHypermeth 1.0929e-02 4.3897e-01 weaklyHypermeth 1.6516e-01 1.0000e+00 insignificant 0.05446783 2.2397e-01 insignificant 1.0000e+00 insignificant 0.795318 0.8103757 -0.0135942 8 0.735739 0.8053952 -6.9656e-02 2.5711e-01 2.4184e-03 weaklyHypometh 1.0000e+00 2.5873e-01 insignificant 6.2026e-01 1.2496e-02 weaklyHypometh 1.0000e+00 7.3835e-01 insignificant -0.06009968 3.8818e-02 weaklyHypometh 0.8822374 insignificant 0.7971831 0.7146145 0.07644035 11 0.761532 0.6813927 0.0801395 1.0083e-03 7.9884e-01 weaklyHypermeth 1.3267e-02 1.0000e+00 weaklyHypermeth 2.3858e-02 8.9182e-01 weaklyHypermeth 3.0984e-01 1.0000e+00 insignificant 0.08738029 7.6942e-02 insignificant 9.8644e-01 insignificant 0.7964952 0.8103757 0.00287177 8 0.7416598 0.8053952 -0.0637354 1.4268e-01 1.6416e-03 inconclusive 1.0000e+00 1.8658e-01 insignificant 4.9569e-01 3.7631e-02 inconclusive 1.0000000 1.0000e+00 insignificant -0.0271872 0.3743677 insignificant 1.00000 insignificant 0.7142857 0.8103757 -0.0702286 8 0.6548421 0.8053952 -0.1505531 9.8616e-01 3.1695e-03 weaklyHypometh 1.0000e+00 4.9524e-02 weaklyHypometh 9.7148e-01 8.7320e-03 weaklyHypometh 1.0000e+00 1.7122e-01 insignificant -0.1145675 2.8556e-02 weaklyHypometh 0.56300976 insignificant chr12 551050 552050 40393 NINJ2 ENSG00000171840 0.8499067 516 10 0.865006 292 7 0.7627054 192 7 0.772036 474 10 0.893548 166 5 0.7855645 477 7 0.7514516 209 7 0.7599950 164 7 0.6361710 219 7 0.7605072 135 7 0.8252907 245 6 0.7309524 63 5 0.8606386 165 8 0.7741176 124 5 0.7893483 245 10 0.7940621 99 5 1.000000 5 0 0.723947 930 8 0.716105 349 5 0.9213956 423 7 0.8167087 110 5 0.7947619 113 9 0.736765 297 10 0.592593 66 5 0.7808095 182 5 0.8552622 253 5 0.7002125 161 6 0.854850 103 5 0.926704 358 8 0.8610423 387 7 0.8471744 368 5 0.823734 296 9 0.7354226 246 10 0.5812338 325 5 0.2751977 241 2 0.750000 4 0 0.4977757 302 10 0.5573789 352 8 0.7519732 371 8 0.7895360 400 8 0.75121102 514 8 0.5803948 793 5 0.6843025 299 8 0.9259571 0.8757076 0.8399221 0.7378055 0.9481481 0.8441681 0.7078765 0.8132165 0.7223450 0.8879932 0.8058513 0.6921958 0.8733858 0.7692368 0.7166793 0.9100390 NA 0.7412010 0.9207964 0.943096 0.9239142 0.9131944 0.936580 0.6907407 0.78495194 0.8497719 0.8921901 0.9114888 0.9445171 0.8447672 0.9375403 0.9049558 0.7912745 0.5842863 0.5810506 NA 0.6660920 0.6269441 0.8782212 0.8424271 0.84050969 0.6516012 0.759804 5 0.818827 0.8798363 -0.05722272 5 0.785008 0.822625 -3.7617e-02 0.9110995 3.7141e-03 weaklyHypometh 1 0.5469705 insignificant 0.994919 4.8612e-03 weaklyHypometh 1 0.529143 insignificant -0.00058064 0.9854402 insignificant 1 insignificant 0.818827 0.5575221 0.21912191 7 0.785008 0.5630466 0.22196139 3.0638e-15 1.0000e+00 hypermethylated 1.0565e-13 1.0000e+00 hypermethylated 1.5300e-06 9.9999e-01 hypermethylated 6.6521e-05 1.0000e+00 hypermethylated 0.23246937 2.1035e-02 weaklyHypermeth 4.1245e-01 insignificant 0.818827 0.7522087 0.0624673 5 0.785008 0.7153644 6.9644e-02 3.0801e-04 9.7332e-01 weaklyHypermeth 1.4000e-02 1.0000e+00 weaklyHypermeth 1.2459e-02 9.9317e-01 weaklyHypermeth 4.9835e-01 1.0000e+00 insignificant 0.08715396 7.7753e-02 insignificant 1.0000000 insignificant 0.8798363 0.5575221 0.27047404 5 0.822625 0.5630466 0.2595782 3.4137e-14 1.0000e+00 hypermethylated 1.5517e-12 1.0000e+00 hypermethylated 2.4376e-07 1.0000e+00 hypermethylated 1.5690e-05 1.0000e+00 hypermethylated 0.23305001 2.0235e-02 weaklyHypermeth 4.3052e-01 insignificant 0.8798363 0.7522087 0.12398607 5 0.8226249 0.7153644 0.1072604 6.8948e-06 9.9827e-01 weaklyHypermeth 6.2680e-04 1.0000e+00 weaklyHypermeth 7.5352e-05 9.9997e-01 weaklyHypermeth 0.0150703 1.0000e+00 weaklyHypermeth 0.0877346 0.0860285 insignificant 1.00000 insignificant 0.5575221 0.7522087 -0.1536757 8 0.5630466 0.7153644 -0.1523178 9.9998e-01 2.3050e-04 weaklyHypometh 1.0000e+00 5.5280e-03 weaklyHypometh 9.9957e-01 5.7091e-03 weaklyHypometh 1.0000e+00 1.2411e-01 insignificant -0.1453154 1.1068e-01 insignificant 1.00000000 insignificant chr12 555550 556550 40394 NINJ2 ENSG00000171840 0.1691620 1037 20 0.148124 933 21 0.1435779 828 24 0.147246 980 19 0.230562 520 24 0.1749909 1149 22 0.1329353 1004 23 0.1742180 836 24 0.1110256 999 20 0.2368448 849 20 0.1779915 821 21 0.1429140 688 20 0.1971345 861 22 0.1570585 478 18 0.1686687 1014 22 0.1850270 724 20 0.194196 582 16 0.155691 989 23 0.156519 667 22 0.1987363 875 20 0.1823143 224 19 0.1333063 525 17 0.189479 796 21 0.179699 457 22 0.1819006 334 18 0.1799149 1191 21 0.1314751 580 21 0.197337 378 20 0.160275 672 18 0.1883803 1311 21 0.1901404 1042 21 0.191609 1116 21 0.0914554 723 21 0.0990884 424 19 0.1732833 697 16 0.083333 304 10 0.1109043 707 22 0.1427802 987 21 0.2153002 1259 21 0.2375659 1089 19 0.23457354 833 21 0.2040639 983 18 0.1818394 1119 22 0.1419788 0.1045040 0.1427942 0.1084269 0.1674832 0.1454220 0.1214252 0.1495096 0.0862706 0.1305983 0.1428820 0.1024257 0.1182076 0.1324215 0.1316367 0.0957693 0.1734793 0.1098641 0.0963806 0.149673 0.1735576 0.0869111 0.140260 0.1259348 0.16308240 0.1479187 0.1232710 0.1204024 0.1261962 0.1102771 0.1297371 0.1583854 0.0458365 0.0496904 0.0334729 0.038139 0.0381075 0.0687988 0.1030732 0.0901448 0.13132549 0.1046878 0.108733 17 0.126767 0.1490842 -0.00500597 21 0.210310 0.157934 5.2376e-02 0.9623299 3.9450e-01 insignificant 1 1.0000000 insignificant 0.928131 8.2928e-01 insignificant 1 1.000000 insignificant -0.00535467 0.5754614 insignificant 1 insignificant 0.126671 0.0994274 0.08164654 21 0.188851 0.1210118 0.06783918 2.2632e-15 9.8887e-01 weaklyHypermeth 8.0828e-14 1.0000e+00 weaklyHypermeth 1.7255e-11 9.9974e-01 weaklyHypermeth 4.3137e-09 1.0000e+00 weaklyHypermeth 0.05332361 1.0255e-02 weaklyHypermeth 2.4114e-01 insignificant 0.126835 0.1262540 0.0115552 22 0.225888 0.2678965 -4.2009e-02 7.4796e-02 3.3967e-02 inconclusive 1.0000e+00 1.0000e+00 insignificant 1.6598e-01 3.2398e-02 inconclusive 1.0000e+00 1.0000e+00 insignificant -0.04453746 6.8761e-03 weaklyHypometh 0.3274312 insignificant 0.1491533 0.0994274 0.08835708 21 0.169633 0.1210118 0.0486209 2.1165e-13 1.0000e+00 weaklyHypermeth 7.2982e-12 1.0000e+00 weaklyHypermeth 2.0399e-09 1.0000e+00 weaklyHypermeth 4.0798e-07 1.0000e+00 weaklyHypermeth 0.05867829 6.6080e-03 weaklyHypermeth 1.6943e-01 insignificant 0.1492052 0.1262540 0.01809007 19 0.1696327 0.2678965 -0.0982638 1.4167e-01 3.4340e-02 inconclusive 1.0000e+00 1.0000e+00 insignificant 3.4341e-01 2.6364e-02 inconclusive 1.0000000 1.0000e+00 insignificant -0.0391828 0.0134906 weaklyHypometh 0.67453 insignificant 0.0995310 0.1259231 -0.0649183 19 0.1256661 0.2397387 -0.1140726 1.0000e+00 1.6099e-09 weaklyHypometh 1.0000e+00 9.4702e-08 weaklyHypometh 1.0000e+00 7.9074e-07 weaklyHypometh 1.0000e+00 1.5815e-04 weaklyHypometh -0.0978611 3.8105e-04 weaklyHypometh 0.02540361 weaklyHypometh chr12 1284350 1285350 40432 ERC1 ENSG00000082805 0.6679876 390 10 0.668402 159 8 0.6933747 120 8 0.718503 200 10 0.833095 60 7 0.7530290 673 10 0.6669666 118 7 0.6471185 109 9 0.6937108 91 6 0.5920635 68 8 0.7206822 298 10 0.6725852 65 4 0.7099960 149 8 NA 0 0 0.7386912 70 7 0.7362915 27 2 0.589881 59 6 0.672115 277 9 0.643347 135 8 0.7347667 541 10 0.7015579 106 7 0.8241829 93 9 0.666819 270 10 0.798889 71 8 0.7166667 58 7 0.7569567 163 10 0.9107063 90 7 0.817010 83 5 0.725289 122 9 0.7823900 186 9 0.6836999 202 10 0.709089 672 10 0.6517857 118 10 0.5319738 119 8 0.6860010 160 8 0.634315 74 4 0.7852686 184 6 0.6226599 179 10 0.7625119 416 10 0.7379844 371 10 0.76104074 266 8 0.6362961 262 7 0.7816653 318 10 0.7125079 0.6971935 0.6111823 0.7688542 0.8115260 0.7953607 0.6955730 0.7150767 0.7556625 0.5293741 0.7826284 0.6569387 0.7306648 NA 0.7447909 0.6670858 0.6365260 0.7393980 0.6927103 0.775852 0.7990813 0.8674943 0.702516 0.7915657 0.79541126 0.7389825 0.9169897 0.7935002 0.8198138 0.7912510 0.7023355 0.7630277 0.7220635 0.6036980 0.7322410 0.600744 0.8392413 0.6644542 0.7954312 0.7919619 0.85343401 0.7551611 0.828132 4 0.744528 0.7726843 -0.03571002 10 0.706003 0.738626 -3.2623e-02 0.9959648 3.2176e-02 weaklyHypometh 1 1.0000000 insignificant 0.997731 1.0109e-03 weaklyHypometh 1 0.505468 insignificant -0.06552889 0.0141651 weaklyHypometh 1 insignificant 0.744528 0.6930456 0.04491613 8 0.706003 0.6453043 0.06069887 7.1617e-03 9.8838e-01 weaklyHypermeth 7.9574e-02 1.0000e+00 weaklyHypermeth 1.7105e-01 9.6754e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.04024182 3.0724e-01 insignificant 1.0000e+00 insignificant 0.744528 0.8052664 -0.0551508 10 0.706003 0.7426525 -3.6649e-02 9.7512e-01 5.4490e-03 weaklyHypometh 1.0000e+00 3.6326e-01 insignificant 9.6781e-01 2.1789e-03 weaklyHypometh 1.0000e+00 2.4210e-01 insignificant -0.04365721 1.8086e-01 insignificant 1.0000000 insignificant 0.7726843 0.6930456 0.08325009 8 0.738626 0.6453043 0.0933220 1.8807e-04 9.9997e-01 weaklyHypermeth 2.7256e-03 1.0000e+00 weaklyHypermeth 3.4804e-03 9.9993e-01 weaklyHypermeth 6.1059e-02 1.0000e+00 weaklyHypermeth 0.10577071 2.6190e-02 weaklyHypermeth 5.2379e-01 insignificant 0.7726843 0.8052664 -0.01625232 10 0.7386262 0.7426525 -0.0040263 8.1926e-01 8.7256e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 6.5223e-01 5.1121e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.0218717 0.5236620 insignificant 1.00000 insignificant 0.6930456 0.8052664 -0.1004973 8 0.6453043 0.7426525 -0.0973483 9.9995e-01 1.7852e-04 weaklyHypometh 1.0000e+00 4.4629e-03 weaklyHypometh 9.9984e-01 4.1381e-04 weaklyHypometh 1.0000e+00 1.7098e-02 weaklyHypometh -0.0838990 8.1400e-02 insignificant 1.00000000 insignificant chr12 1479450 1480450 40442 ERC1 ENSG00000082805 0.9266185 401 14 0.878919 257 16 0.9089617 252 17 0.974331 387 11 0.961033 182 14 0.9339211 297 14 0.9434123 207 14 0.9029031 173 14 0.9305921 135 13 0.9413555 129 8 0.9049753 278 15 0.8859844 112 12 0.9031854 179 10 0.9800000 53 9 0.9630433 168 13 0.9284848 64 5 0.964286 87 5 0.880802 446 13 0.967471 267 13 0.8792573 247 14 0.9052019 132 11 0.9604396 180 10 0.946243 221 17 0.974510 92 10 0.9330959 344 9 0.9532566 276 20 0.9260597 181 13 0.947778 68 5 0.888730 109 8 0.9194602 227 13 0.9118618 296 19 0.913831 387 19 0.7218050 316 18 0.8226940 334 14 0.6588428 682 20 0.911111 74 2 0.5761815 122 10 0.8346332 354 17 0.9644197 402 16 0.9722848 293 15 0.94448538 384 16 0.9878035 192 13 0.9709030 303 16 0.9381577 0.8550438 0.9173876 0.9616176 0.9623155 0.9770974 0.9243292 0.9621623 0.9328826 0.9716950 0.9396226 0.9277024 0.8903258 0.9660674 0.9531686 0.9397824 0.9536087 0.9523643 0.9673488 0.952409 0.9644601 0.9657360 0.953964 0.9888889 0.93480676 0.9503160 0.9062672 0.9336182 0.9209809 0.9361254 0.9595186 0.9671523 0.7250167 0.8256414 0.5217740 0.908161 0.6441472 0.8128499 0.9792878 0.9798507 0.96882312 0.9851150 0.974734 2 0.928654 0.9311031 -0.00284666 14 0.930311 0.922123 8.1874e-03 0.7801183 4.8980e-01 insignificant 1 1.0000000 insignificant 0.873862 3.4086e-01 insignificant 1 1.000000 insignificant -0.00372876 0.7244648 insignificant 1 insignificant 0.928671 0.6377278 0.30729341 14 0.933341 0.7367039 0.19663665 7.3031e-37 1.0000e+00 hypermethylated 1.0433e-34 1.0000e+00 hypermethylated 2.2818e-06 1.0000e+00 hypermethylated 9.5074e-05 1.0000e+00 hypermethylated 0.17376562 1.8417e-02 weaklyHypermeth 3.8368e-01 insignificant 0.928489 0.9574333 -0.0298950 13 0.930311 0.9660442 -3.5734e-02 1.0000e+00 5.9548e-03 weaklyHypometh 1.0000e+00 3.7217e-01 insignificant 9.9977e-01 1.9015e-02 weaklyHypometh 1.0000e+00 8.3648e-01 insignificant -0.04000239 1.5435e-03 weaklyHypometh 0.1282358 insignificant 0.9311306 0.6406167 0.28579786 14 0.925509 0.7367039 0.1888052 3.7684e-25 1.0000e+00 hypermethylated 5.3835e-23 1.0000e+00 hypermethylated 7.1406e-06 1.0000e+00 hypermethylated 3.2457e-04 1.0000e+00 hypermethylated 0.17749438 1.7012e-02 weaklyHypermeth 3.6982e-01 insignificant 0.9313099 0.9574062 -0.02867781 13 0.9252175 0.9644272 -0.0392097 9.9901e-01 4.1167e-03 weaklyHypometh 1.0000e+00 3.8537e-01 insignificant 9.8342e-01 4.1274e-02 weaklyHypometh 1.0000000 1.0000e+00 insignificant -0.0362736 0.0036921 weaklyHypometh 0.44472 insignificant 0.6367061 0.9574333 -0.3312508 14 0.7304177 0.9660442 -0.2356265 1.0000e+00 1.3233e-17 hypomethylated 1.0000e+00 1.8905e-15 hypomethylated 1.0000e+00 2.4943e-06 hypomethylated 1.0000e+00 2.8732e-04 hypomethylated -0.2137680 8.1176e-03 weaklyHypometh 0.26185832 insignificant chr12 1479550 1480550 40443 ERC1 ENSG00000082805 0.9266185 401 14 0.874259 271 17 0.9135136 253 17 0.970447 414 12 0.961033 182 14 0.9339211 297 14 0.9280375 210 14 0.9029031 173 14 0.9305921 135 13 0.9448052 135 9 0.9036445 295 16 0.8935854 115 12 0.8941745 195 11 0.9800000 53 9 0.9653531 172 13 0.9284848 64 5 0.964286 87 5 0.883948 466 14 0.967471 267 13 0.8781516 261 15 0.9107783 137 12 0.9519658 186 11 0.940400 238 18 0.975926 97 11 0.9286281 358 10 0.9543007 320 21 0.9136024 188 14 0.947778 68 5 0.895685 124 9 0.8653743 228 13 0.9131133 329 20 0.915555 430 20 0.7350524 321 19 0.8331238 351 15 0.6588428 682 20 0.916667 77 2 0.6011120 123 10 0.8412029 402 18 0.9644197 402 16 0.9716507 317 16 0.94418167 400 17 0.9878035 192 13 0.9659394 318 17 0.9381577 0.8550438 0.9173876 0.9616176 0.9623155 0.9770974 0.9243292 0.9621623 0.9328826 0.9716950 0.9396226 0.9277024 0.8903258 0.9660674 0.9531686 0.9397824 0.9536087 0.9523643 0.9673488 0.952409 0.9644601 0.9657360 0.953964 0.9888889 0.93480676 0.9503160 0.9062672 0.9336182 0.9209809 0.9361254 0.9595186 0.9671523 0.7250167 0.8256414 0.5217740 0.908161 0.6441472 0.8128499 0.9792878 0.9798507 0.96882312 0.9851150 0.974734 2 0.927060 0.9307664 -0.00448067 15 0.927775 0.922305 5.4699e-03 0.8334921 3.8023e-01 insignificant 1 1.0000000 insignificant 0.876075 3.7978e-01 insignificant 1 1.000000 insignificant 0.00116929 0.9194401 insignificant 1 insignificant 0.927076 0.6510309 0.29507877 15 0.930785 0.7471115 0.18367318 4.5970e-36 9.9794e-01 hypermethylated 5.7463e-34 1.0000e+00 hypermethylated 5.2389e-06 9.9998e-01 hypermethylated 1.9403e-04 1.0000e+00 hypermethylated 0.16292805 2.0599e-02 weaklyHypermeth 4.1245e-01 insignificant 0.926895 0.9564150 -0.0306458 14 0.927775 0.9643585 -3.6583e-02 1.0000e+00 4.5942e-03 weaklyHypometh 1.0000e+00 3.5340e-01 insignificant 9.9979e-01 2.3335e-02 weaklyHypometh 1.0000e+00 9.3340e-01 insignificant -0.03953751 1.6671e-03 weaklyHypometh 0.1282358 insignificant 0.9307920 0.6537084 0.26638795 15 0.925543 0.7471115 0.1784312 1.6923e-24 9.9996e-01 hypermethylated 1.8804e-22 1.0000e+00 hypermethylated 1.5941e-05 9.9976e-01 hypermethylated 6.1311e-04 1.0000e+00 hypermethylated 0.16175876 2.1004e-02 weaklyHypermeth 4.3759e-01 insignificant 0.9309577 0.9563882 -0.02720413 14 0.9252674 0.9627384 -0.0374710 9.9900e-01 5.3406e-03 weaklyHypometh 1.0000e+00 3.9303e-01 insignificant 9.8570e-01 4.9360e-02 weaklyHypometh 1.0000000 1.0000e+00 insignificant -0.0407068 0.0026623 weaklyHypometh 0.44372 insignificant 0.6501035 0.9564150 -0.3156190 15 0.7415512 0.9643585 -0.2228073 1.0000e+00 5.2952e-17 hypomethylated 1.0000e+00 6.6191e-15 hypomethylated 1.0000e+00 5.8742e-06 hypomethylated 1.0000e+00 4.5186e-04 hypomethylated -0.2024656 8.7966e-03 weaklyHypometh 0.27489307 insignificant chr12 1601150 1602150 40450 WNT5B ENSG00000111186 0.7992794 261 7 0.746753 87 7 0.7471655 73 7 0.786487 131 7 0.716327 33 3 0.8129252 226 7 0.7156796 71 7 0.7155910 73 7 0.8018038 55 5 0.7253968 60 7 0.7150041 140 7 0.8650183 82 7 0.8637188 89 7 NA 0 0 0.8206698 96 7 0.8560091 85 7 0.711990 64 7 0.689438 105 7 0.835674 151 7 0.7975018 184 7 0.6626984 40 5 0.8535714 53 7 0.729686 131 7 0.763889 33 2 0.9714286 52 7 0.8086538 126 7 0.8009259 30 2 0.892857 26 2 0.814337 70 7 0.7752832 167 7 0.7820688 102 7 0.843369 236 7 0.7171202 72 7 0.7859546 104 7 0.7885931 170 7 0.902041 39 6 0.7727891 71 7 0.8221050 107 7 0.8459491 247 7 0.8633934 326 7 0.83842900 184 7 0.8016258 227 7 0.7833478 214 7 0.8148786 0.7784206 0.7671477 0.8258756 0.7565945 0.8293531 0.7447139 0.7462233 0.7908264 0.7347475 0.7513673 0.8900311 0.8727504 NA 0.8361538 0.8751323 0.7257684 0.7298692 0.8386168 0.815828 0.7294613 0.8654545 0.740491 0.7958754 0.96242424 0.8211325 0.8287915 0.9020202 0.8219268 0.7931840 0.7889968 0.8493057 0.7374747 0.7903598 0.7639262 0.896623 0.8167677 0.8313074 0.8649843 0.8853960 0.85778500 0.8288741 0.799279 3 0.787512 0.8133208 -0.01877143 7 0.781635 0.806408 -2.4773e-02 0.8203193 4.9251e-02 weaklyHypometh 1 1.0000000 insignificant 0.891601 1.5525e-02 weaklyHypometh 1 1.000000 insignificant -0.03336584 0.2215545 insignificant 1 insignificant 0.787512 0.8099467 -0.02094051 7 0.781635 0.8090541 -0.02741919 4.1161e-01 1.4429e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.8882e-01 2.6666e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02323564 4.3656e-01 insignificant 1.0000e+00 insignificant 0.787512 0.8272120 -0.0501012 7 0.781635 0.8302673 -4.8632e-02 9.9738e-01 8.1480e-03 weaklyHypometh 1.0000e+00 4.2884e-01 insignificant 9.8823e-01 3.3421e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.05168419 2.4130e-02 weaklyHypometh 0.6790744 insignificant 0.8133208 0.8099467 0.00135047 7 0.806408 0.8090541 -0.0026464 2.6393e-01 5.1566e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.2636e-01 6.3951e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01013021 7.6943e-01 insignificant 1.0000e+00 insignificant 0.8133208 0.8272120 -0.02968618 7 0.8064077 0.8302673 -0.0238595 9.3743e-01 9.3672e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 7.1387e-01 4.8998e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.0183183 0.5096462 insignificant 1.00000 insignificant 0.8099467 0.8272120 -0.0276165 7 0.8090541 0.8302673 -0.0212132 4.7225e-01 4.1532e-02 weaklyHypometh 1.0000e+00 4.3619e-01 insignificant 6.9350e-01 1.3844e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0284486 3.5689e-01 insignificant 1.00000000 insignificant chr12 1639750 1640750 40453 WNT5B ENSG00000111186 0.0287923 186 12 0.058540 267 13 0.1040708 255 13 0.000000 52 4 0.036325 155 12 0.0462932 178 10 0.0609378 386 13 0.0678599 269 12 0.0583202 217 12 0.0660027 221 13 0.1057981 287 13 0.1674948 329 13 0.0219253 377 13 NA 0 0 0.0502623 247 13 0.0842978 352 13 0.031200 202 11 0.180342 91 10 0.061398 209 12 0.0095885 293 13 0.0481740 71 6 0.0625000 40 4 0.066632 243 13 0.019231 113 11 0.0208333 28 1 0.0690728 354 13 0.1121271 236 12 0.174475 122 8 0.108870 290 12 0.0423855 365 13 0.0255413 346 13 0.071714 421 13 0.0896851 229 12 0.1929674 155 12 0.3157845 203 13 0.230383 133 12 0.3720391 63 5 0.1927455 322 13 0.1491354 190 12 0.1429428 236 12 0.00769231 69 10 0.0881119 132 13 0.1093173 128 12 0.0298025 0.0514397 0.0829113 0.0000000 0.0253110 0.0436000 0.0642191 0.0513507 0.0601195 0.0602702 0.0898952 0.1560810 0.0157396 NA 0.0460478 0.0756396 0.0307837 0.1485843 0.0485975 0.009878 0.0619321 0.0569653 0.061662 0.0246139 0.02016123 0.0544423 0.0966343 0.1663874 0.1016725 0.0352079 0.0255769 0.0712332 0.0770178 0.1546150 0.2559560 0.165582 0.2966661 0.1426175 0.1168358 0.1104066 0.01196911 0.0489294 0.083564 4 0.057293 0.0612400 -0.00454514 13 0.066955 0.066195 7.5945e-04 0.4878231 2.2476e-01 insignificant 1 1.0000000 insignificant 0.353780 3.5849e-01 insignificant 1 1.000000 insignificant -0.00322883 0.8508055 insignificant 1 insignificant 0.057293 0.1710407 -0.11303294 13 0.066955 0.2211507 -0.15419618 1.0000e+00 2.5231e-24 weaklyHypometh 1.0000e+00 1.2615e-21 weaklyHypometh 1.0000e+00 1.0105e-13 weaklyHypometh 1.0000e+00 5.0523e-11 weaklyHypometh -0.16703340 8.2234e-03 weaklyHypometh 2.0057e-01 insignificant 0.057293 0.1099338 -0.0407517 12 0.066955 0.1185819 -5.1627e-02 9.6966e-01 1.2733e-04 weaklyHypometh 1.0000e+00 1.8190e-02 weaklyHypometh 8.1712e-01 1.1324e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03420583 2.6699e-01 insignificant 1.0000000 insignificant 0.0612400 0.1710407 -0.10886640 13 0.066195 0.2211507 -0.1549556 1.0000e+00 1.9063e-18 weaklyHypometh 1.0000e+00 9.5314e-16 weaklyHypometh 1.0000e+00 2.0290e-09 weaklyHypometh 1.0000e+00 1.0145e-06 weaklyHypometh -0.16380457 8.5989e-03 weaklyHypometh 2.0973e-01 insignificant 0.0612400 0.1099338 -0.04130939 12 0.0661951 0.1185819 -0.0523868 8.1155e-01 2.8331e-05 weaklyHypometh 1.0000e+00 5.6661e-03 weaklyHypometh 6.5357e-01 9.0672e-02 insignificant 1.0000000 1.0000e+00 insignificant -0.0309770 0.3196593 insignificant 1.00000 insignificant 0.1710407 0.1099338 0.0954845 12 0.2211507 0.1185819 0.1025688 6.9202e-07 1.0000e+00 weaklyHypermeth 1.7301e-04 1.0000e+00 weaklyHypermeth 3.6188e-06 1.0000e+00 weaklyHypermeth 1.8094e-03 1.0000e+00 weaklyHypermeth 0.1328276 2.4311e-02 weaklyHypermeth 0.51725426 insignificant chr12 2942950 2943950 40472 TEAD4 ENSG00000197905 0.2024060 92 5 0.041143 122 5 0.1902887 200 5 0.134058 121 5 0.064167 105 5 0.4102207 196 5 0.1401164 140 5 0.2008204 158 5 0.0591595 234 5 0.1870832 227 5 0.2015998 160 5 0.1670982 208 5 0.0407814 166 5 0.2043860 153 5 0.0791255 212 5 0.0619048 210 5 0.025000 25 2 0.115440 156 5 0.068330 90 5 0.1327033 122 5 0.0972222 48 5 0.2805491 120 5 0.249420 76 5 0.183874 125 5 0.1879630 77 5 0.0673026 130 5 0.1477411 207 5 0.042578 71 5 0.276452 79 5 0.0935413 205 5 0.1981818 116 5 0.176619 117 5 0.1284565 103 5 0.3077381 39 2 0.5000000 22 2 0.266667 13 1 0.2700706 96 5 0.0962500 112 5 0.5890909 92 5 0.4393678 89 5 0.46940789 86 5 0.2018056 83 4 0.4041429 72 5 0.1338381 0.0323031 0.1260701 0.1396355 0.0540693 0.4010781 0.1012801 0.1257117 0.0410192 0.1640970 0.1554746 0.1098988 0.0437621 0.1558657 0.0722917 0.0778260 0.0338785 0.0947856 0.0662396 0.128885 0.1233126 0.2818709 0.185741 0.1352182 0.16495760 0.0441312 0.1018489 0.0395241 0.1695207 0.0715164 0.1269754 0.1442482 0.0928119 0.2156069 0.3603863 0.257271 0.2570664 0.0688571 0.5331138 0.4585280 0.43655620 0.2155049 0.406816 3 0.117533 0.1342086 -0.00589741 5 0.145482 0.158681 -1.3199e-02 0.6818332 3.2862e-01 insignificant 1 1.0000000 insignificant 0.933837 1.9712e-01 insignificant 1 1.000000 insignificant -0.03049547 0.3274692 lowCoverage 1 lowCoverage 0.117533 0.1766234 -0.04434705 5 0.145482 0.1904892 -0.04500736 8.8175e-01 1.2730e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9673e-01 2.3757e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.12523874 8.9338e-02 lowCoverage 1.0000e+00 lowCoverage 0.117533 0.4170616 -0.3056829 5 0.145482 0.4309333 -2.8545e-01 1.0000e+00 4.8960e-18 hypomethylated 1.0000e+00 4.8960e-15 hypomethylated 1.0000e+00 6.5096e-10 hypomethylated 1.0000e+00 6.5096e-07 hypomethylated -0.28447143 8.2290e-03 lowCoverage 0.3577816 lowCoverage 0.1342086 0.1766234 -0.03602971 5 0.158681 0.1904892 -0.0318087 7.6183e-01 1.0791e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.5360e-01 1.0000e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.09474327 1.8048e-01 lowCoverage 1.0000e+00 lowCoverage 0.1342086 0.4170616 -0.29739592 5 0.1586806 0.4309333 -0.2722527 1.0000e+00 4.2017e-13 hypomethylated 1.0000e+00 4.2017e-10 hypomethylated 1.0000e+00 6.8756e-07 hypomethylated 1.0000000 3.4378e-04 hypomethylated -0.2539760 0.0122881 lowCoverage 0.67453 lowCoverage 0.1766234 0.4170616 -0.2496393 5 0.1904892 0.4309333 -0.2404440 9.9997e-01 1.2473e-05 hypomethylated 1.0000e+00 3.8977e-04 hypomethylated 9.9994e-01 1.6285e-03 weaklyHypometh 1.0000e+00 4.6528e-02 weaklyHypometh -0.1592327 9.8904e-02 lowCoverage 1.00000000 lowCoverage chr12 4010650 4011650 40484 PARP11 ENSG00000111224 0.2081608 1232 42 0.098585 1288 52 0.0964944 1299 55 0.200203 1068 39 0.146231 950 50 0.2093482 1350 48 0.1081994 1324 51 0.1545635 1292 53 0.1055106 1138 51 0.1420248 1161 49 0.1780477 1521 54 0.0624086 1357 46 0.1658577 848 44 0.2103393 434 17 0.1799885 1217 48 0.1140043 812 36 0.096809 352 28 0.208542 832 32 0.050780 781 40 0.1314977 805 35 0.1027783 513 37 0.1417915 635 30 0.158831 787 48 0.197153 681 43 0.1599218 624 32 0.1776824 1401 52 0.1412204 1011 44 0.087063 516 36 0.125973 645 39 0.1103934 1563 53 0.1711636 1257 51 0.242554 1219 49 0.0887113 1124 52 0.1455387 766 50 0.1566609 521 32 0.053333 499 30 0.1026508 697 42 0.1064771 985 50 0.1669285 1429 42 0.1991475 1389 45 0.21069416 1202 40 0.2653751 1017 29 0.2031861 1432 41 0.1693933 0.0544915 0.0856698 0.1728434 0.1037481 0.1475551 0.0847436 0.1192640 0.1074864 0.1261939 0.1749928 0.0574590 0.1573487 0.1436027 0.1654835 0.1247617 0.1071095 0.1629516 0.0376040 0.099449 0.1036892 0.1337354 0.141810 0.1643571 0.12899724 0.1378426 0.1001776 0.0711387 0.1094553 0.0821194 0.1327067 0.1766878 0.0656184 0.1548720 0.0960905 0.062541 0.1182412 0.0848007 0.1192850 0.1495068 0.18287598 0.1757409 0.158708 18 0.110372 0.1313485 -0.00654127 51 0.153013 0.149919 3.0937e-03 0.6091241 9.3427e-01 insignificant 1 1.0000000 insignificant 0.349738 9.8152e-01 insignificant 1 1.000000 insignificant -0.00799724 0.6395950 insignificant 1 insignificant 0.110351 0.1202352 0.02028780 49 0.143283 0.1186042 0.02467844 7.8908e-09 1.0000e+00 weaklyHypermeth 2.0765e-07 1.0000e+00 weaklyHypermeth 2.8179e-09 1.0000e+00 weaklyHypermeth 2.7423e-07 1.0000e+00 weaklyHypermeth 0.03448442 9.9472e-02 insignificant 1.0000e+00 insignificant 0.110313 0.0855375 -0.0241011 40 0.142432 0.1835118 -4.1080e-02 9.8579e-01 5.5699e-10 weaklyHypometh 1.0000e+00 1.8566e-07 weaklyHypometh 9.9952e-01 1.2076e-06 weaklyHypometh 1.0000e+00 4.0254e-04 weaklyHypometh -0.06568651 8.9666e-03 weaklyHypometh 0.3736066 insignificant 0.1310810 0.1202352 0.02655600 49 0.143481 0.1186042 0.0248764 7.3451e-08 1.0000e+00 weaklyHypermeth 1.7915e-06 1.0000e+00 weaklyHypermeth 3.8003e-05 1.0000e+00 weaklyHypermeth 1.3573e-03 1.0000e+00 weaklyHypermeth 0.04248166 5.4917e-02 insignificant 7.7347e-01 insignificant 0.1310855 0.0855243 -0.02030675 40 0.1438106 0.1802348 -0.0364242 9.9834e-01 2.0822e-07 weaklyHypometh 1.0000e+00 6.9406e-05 weaklyHypometh 9.9998e-01 9.8527e-08 weaklyHypometh 1.0000000 9.8527e-05 weaklyHypometh -0.0576893 0.0188119 weaklyHypometh 0.81791 insignificant 0.1200697 0.0859617 -0.0575881 38 0.1117935 0.1980919 -0.0862984 1.0000e+00 2.8967e-13 weaklyHypometh 1.0000e+00 2.6334e-11 weaklyHypometh 1.0000e+00 2.4582e-10 weaklyHypometh 1.0000e+00 1.2291e-07 weaklyHypometh -0.1001709 1.5403e-03 weaklyHypometh 0.08135169 weaklyHypometh chr12 4371350 4372350 40491 FGF23 ENSG00000118972 0.8573733 343 10 0.758794 300 10 0.6599164 185 7 0.895472 329 8 0.792436 134 6 0.8430330 329 10 0.6666618 214 6 0.8675148 252 10 0.7825524 230 10 0.8844589 176 7 0.8752295 357 10 0.8535760 138 6 0.8986860 319 10 0.9166667 51 4 0.8172824 250 10 0.7754859 96 5 0.784828 62 3 0.691358 353 10 0.892444 207 10 0.8622187 261 9 0.9279591 117 10 0.7904619 161 8 0.807727 183 10 0.767253 91 7 0.6978502 104 8 0.9095184 327 10 0.7213333 164 10 0.733333 56 6 0.882165 247 10 0.9006130 325 10 0.8800101 258 10 0.918464 347 10 0.3602158 268 10 0.2959473 207 10 0.5277778 67 4 0.353333 29 4 0.4596674 174 9 0.4683578 332 10 0.8249971 156 9 0.8832966 238 9 0.84194853 223 8 0.7809524 130 7 0.8644657 186 8 0.9219433 0.8073867 0.7710473 0.8959977 0.8315763 0.8603561 0.7559457 0.8539152 0.7647055 0.8750391 0.8897908 0.8199144 0.8932818 0.8976727 0.7740285 0.7734940 0.7257146 0.8547363 0.8707980 0.919022 0.9106338 0.7940483 0.755558 0.8323835 0.79873641 0.9243161 0.7563052 0.8164989 0.8337236 0.9320957 0.9033152 0.9042465 0.3231080 0.2790968 0.5398828 0.399197 0.4827027 0.6665434 0.8215255 0.9042300 0.89314364 0.7260949 0.895266 4 0.834278 0.8587642 -0.02822947 10 0.831131 0.860185 -2.9054e-02 0.9942997 6.6866e-02 insignificant 1 1.0000000 insignificant 0.983435 1.1653e-01 insignificant 1 1.000000 insignificant -0.00925813 0.7604205 insignificant 1 insignificant 0.834278 0.4038997 0.42563085 10 0.831131 0.4044891 0.42664197 1.1146e-48 1.0000e+00 hypermethylated 9.7053e-46 1.0000e+00 hypermethylated 2.8032e-16 1.0000e+00 hypermethylated 1.4016e-13 1.0000e+00 hypermethylated 0.40791605 1.0817e-05 hypermethylated 6.7608e-04 hypermethylated 0.834278 0.8274384 -0.0060888 8 0.831131 0.8502957 -1.9165e-02 8.3712e-01 1.4759e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.6437e-01 2.5372e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02033277 4.2638e-01 insignificant 1.0000000 insignificant 0.8587642 0.4038997 0.45630659 10 0.860185 0.4044891 0.4556956 7.8071e-38 1.0000e+00 hypermethylated 1.9518e-35 1.0000e+00 hypermethylated 1.7067e-14 1.0000e+00 hypermethylated 1.5843e-11 1.0000e+00 hypermethylated 0.41717418 2.6815e-06 hypermethylated 2.6815e-04 hypermethylated 0.8587642 0.8274384 0.01831069 8 0.8601847 0.8502957 0.0098890 3.0904e-01 7.3061e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.2253e-01 7.0027e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.0110746 0.7179312 insignificant 1.00000 insignificant 0.4038997 0.8274384 -0.4426761 8 0.4044891 0.8502957 -0.4458066 1.0000e+00 2.5261e-22 hypomethylated 1.0000e+00 6.3152e-20 hypomethylated 1.0000e+00 1.6572e-10 hypomethylated 1.0000e+00 1.2291e-07 hypomethylated -0.4282488 1.1101e-05 hypomethylated 0.00185023 hypomethylated chr12 6258150 6259150 40517 ENSG00000202318 0.1896716 907 27 0.147820 941 31 0.0610192 1375 28 0.078210 1019 28 0.115523 1175 34 0.0935137 1376 29 0.1213431 1056 30 0.1292470 877 30 0.1579647 1176 28 0.2159997 1482 27 0.1033878 1125 31 0.1267828 1188 29 0.1241947 1043 33 0.1216181 856 25 0.0768217 1508 29 0.0937760 1457 29 0.086817 418 18 0.161245 1152 26 0.084200 944 28 0.1205184 1210 31 0.1111705 610 30 0.1162342 928 24 0.118474 554 27 0.123172 622 32 0.1205223 611 29 0.0659446 1122 28 0.1126680 1351 28 0.231417 696 29 0.082952 917 31 0.0678560 1261 28 0.1318077 1012 31 0.124885 1178 31 0.1155112 735 28 0.0713180 567 28 0.1294261 796 30 0.064156 393 24 0.1559007 619 33 0.0834351 1145 31 0.1770843 1345 27 0.1058843 1035 33 0.17504366 1033 28 0.0449482 876 28 0.0961411 1238 27 0.0268988 0.0245580 0.0184008 0.0179955 0.0168138 0.0239514 0.0319481 0.0499263 0.0321044 0.0202860 0.0412277 0.0240903 0.0156887 0.0257596 0.0177873 0.0234483 0.0271422 0.0192103 0.0175030 0.023828 0.0214574 0.0200134 0.093775 0.0354088 0.02603556 0.0202071 0.0183930 0.0304224 0.0219887 0.0190800 0.0295222 0.0351831 0.0068002 0.0126936 0.0093792 0.023025 0.0236880 0.0067650 0.0265078 0.0219879 0.01210428 0.0173393 0.032557 24 0.030200 0.0345240 -0.00216304 28 0.146682 0.153268 -6.5863e-03 0.5725263 5.9789e-01 insignificant 1 1.0000000 insignificant 0.579623 5.9053e-01 insignificant 1 1.000000 insignificant 0.00322509 0.8321231 insignificant 1 insignificant 0.030178 0.0251469 0.01303957 28 0.152747 0.1327247 0.02002188 5.0762e-07 9.9994e-01 weaklyHypermeth 9.9534e-06 1.0000e+00 weaklyHypermeth 5.0699e-05 9.9998e-01 weaklyHypermeth 1.4911e-03 1.0000e+00 weaklyHypermeth 0.01719257 3.4365e-01 insignificant 1.0000e+00 insignificant 0.030199 0.0430613 0.0045237 25 0.158812 0.1321091 2.6703e-02 1.1338e-01 6.6767e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.1567e-01 8.4817e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00066344 9.8112e-01 insignificant 1.0000000 insignificant 0.0345590 0.0251469 0.01616924 31 0.162652 0.1327247 0.0299269 5.1316e-04 9.9974e-01 weaklyHypermeth 7.1272e-03 1.0000e+00 weaklyHypermeth 3.4153e-03 9.9998e-01 weaklyHypermeth 6.0987e-02 1.0000e+00 weaklyHypermeth 0.01396749 4.8043e-01 insignificant 1.0000e+00 insignificant 0.0344128 0.0430613 0.00629195 28 0.1594413 0.1321091 0.0273321 7.0480e-01 8.7656e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.9639e-01 8.4062e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.0025616 0.9300675 insignificant 1.00000 insignificant 0.0249412 0.0430691 -0.0094051 28 0.1196416 0.1349811 -0.0153395 9.9998e-01 4.0373e-05 weaklyHypometh 1.0000e+00 1.1634e-03 weaklyHypometh 1.0000e+00 1.4522e-02 weaklyHypometh 1.0000e+00 2.5932e-01 insignificant -0.0165291 5.9009e-01 insignificant 1.00000000 insignificant chr12 6348550 6349550 40525 TNFRSF1A ENSG00000067182 0.5957511 188 9 0.721422 197 9 0.5916667 107 4 0.794220 150 9 0.754808 109 8 0.7706118 318 9 0.4786042 67 3 0.6580891 178 9 0.7643441 79 5 0.8751755 82 7 0.7472656 288 9 0.7275641 43 3 0.7238757 120 8 0.7750000 42 6 0.7915238 79 7 0.9063492 33 3 0.703704 30 3 0.775626 232 10 0.822681 164 8 0.8972119 204 9 0.8977366 82 3 0.8558487 66 3 0.721501 103 8 0.588203 63 7 0.7973064 74 8 0.8196289 228 9 0.6309901 107 6 0.796296 28 2 0.792659 126 9 0.7185906 192 9 0.6455469 207 9 0.833626 341 9 0.6541742 145 7 0.5380326 106 7 0.5061146 119 8 0.701736 46 3 0.6948050 90 7 0.7993676 212 8 0.7731066 171 9 0.8114128 227 8 0.79292167 172 8 0.7721026 160 7 0.7559073 143 8 0.8063501 0.7771462 0.7155945 0.8606706 0.8888327 0.8368248 0.6894087 0.8765196 0.8122684 0.8671320 0.8506761 0.8824252 0.8602757 0.8002256 0.8941855 0.9452642 0.8527703 0.7714644 0.8269672 0.892043 0.8949859 0.9001247 0.828293 0.8677597 0.87467659 0.8487214 0.8321215 0.8898635 0.8233895 0.8328994 0.8496511 0.8602424 0.8432756 0.6747571 0.5754202 0.825844 0.7807055 0.7258504 0.8765988 0.8710716 0.87053455 0.8441206 0.831681 2 0.808118 0.8262214 -0.01838156 8 0.756549 0.730822 2.5727e-02 0.3826508 1.4349e-01 insignificant 1 1.0000000 insignificant 0.794506 4.9706e-01 insignificant 1 1.000000 insignificant -0.01438637 0.6963469 insignificant 1 insignificant 0.808118 0.7311978 0.08726964 8 0.756549 0.6005777 0.15597147 9.6225e-07 9.9929e-01 weaklyHypermeth 1.8156e-05 1.0000e+00 weaklyHypermeth 6.0948e-03 9.9943e-01 weaklyHypermeth 9.6742e-02 1.0000e+00 weaklyHypermeth 0.09473638 9.7999e-02 insignificant 1.0000e+00 insignificant 0.807458 0.8132875 -0.0163987 8 0.742005 0.7972809 -5.5276e-02 2.8786e-01 4.3362e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 2.1945e-01 1.9239e-02 weaklyHypometh 1.0000e+00 8.3648e-01 insignificant -0.03731548 1.5283e-01 insignificant 1.0000000 insignificant 0.8262214 0.7311978 0.10855242 8 0.730822 0.6005777 0.1302441 4.8280e-06 9.9582e-01 weaklyHypermeth 9.8530e-05 1.0000e+00 weaklyHypermeth 1.2818e-03 9.9917e-01 weaklyHypermeth 2.5133e-02 1.0000e+00 weaklyHypermeth 0.10912276 6.8743e-02 insignificant 8.9452e-01 insignificant 0.8296807 0.8132875 -0.00112199 8 0.7669862 0.7972809 -0.0302947 5.6732e-01 5.4515e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 5.3019e-01 3.2022e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.0229291 0.4517986 insignificant 1.00000 insignificant 0.7366197 0.8132875 -0.1241354 8 0.6706933 0.7972809 -0.1265876 9.9699e-01 3.0301e-03 weaklyHypometh 1.0000e+00 4.8872e-02 weaklyHypometh 9.7754e-01 6.2033e-04 weaklyHypometh 1.0000e+00 2.2155e-02 weaklyHypometh -0.1320519 3.1220e-02 weaklyHypometh 0.58906236 insignificant chr12 6522450 6523450 40531 GAPDH ENSG00000111640 0.7638889 81 5 0.702595 119 5 0.5677249 91 5 0.652381 106 3 0.517949 50 5 0.6284878 100 5 0.4841270 46 5 0.7992433 102 7 0.4835165 42 3 0.7492063 38 3 0.5830741 134 8 0.7083333 18 1 0.7920154 85 7 0.8031746 41 3 0.4804762 67 5 0.3333333 27 3 0.763516 282 3 0.562784 114 6 0.759259 45 5 0.6754545 82 6 0.6833333 22 1 0.6000000 9 0 0.785403 78 5 0.733333 36 3 0.6958333 25 1 0.6054237 151 7 0.6444444 33 3 0.607143 22 1 0.719105 53 3 0.5979840 125 7 0.6218434 145 7 0.646322 77 5 0.5545969 109 7 0.6926407 47 5 0.7026580 97 7 0.653680 27 1 0.5791005 60 7 0.5753325 135 7 0.6383230 111 4 0.7579813 108 7 0.51909091 123 5 0.6934524 57 3 0.7241555 119 5 0.7435185 0.8206013 0.6900317 0.7363492 0.6975214 0.7369942 0.5380952 0.7599753 0.6743956 0.8210370 0.6607739 0.8088889 0.7535700 0.8678095 0.6916825 0.6100000 0.7794316 0.7819130 0.8244444 0.750545 0.6995556 0.5400000 0.782890 0.7840000 0.74472222 0.7532019 0.8346667 0.7113993 0.7600032 0.7320167 0.7653788 0.7641419 0.6192030 0.6220202 0.7059282 0.737980 0.6806349 0.6945416 0.7341565 0.7985530 0.76623636 0.8288889 0.759499 1 0.680240 0.7100515 -0.03046453 5 0.605265 0.598593 6.6725e-03 0.9677322 1.9280e-01 insignificant 1 1.0000000 insignificant 0.844063 5.1859e-01 insignificant 1 1.000000 insignificant -0.02115368 0.5475675 lowCoverage 1 lowCoverage 0.680240 0.6294737 0.06114185 5 0.605265 0.5954145 0.00985078 1.1145e-02 9.1527e-01 weaklyHypermeth 1.1984e-01 1.0000e+00 insignificant 8.0583e-02 9.7239e-01 insignificant 8.3940e-01 1.0000e+00 insignificant 0.01419231 7.2615e-01 lowCoverage 1.0000e+00 lowCoverage 0.681299 0.7277992 -0.0395331 5 0.624898 0.6594555 -3.4558e-02 9.4535e-01 1.5162e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.2044e-01 3.7284e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02607360 6.2455e-01 lowCoverage 1.0000000 lowCoverage 0.7100515 0.6294737 0.09172063 5 0.598593 0.5954145 0.0031783 1.2300e-03 9.9744e-01 weaklyHypermeth 1.5569e-02 1.0000e+00 weaklyHypermeth 5.7600e-02 9.6089e-01 insignificant 5.9381e-01 1.0000e+00 insignificant 0.03534599 2.9364e-01 lowCoverage 1.0000e+00 lowCoverage 0.7109677 0.7277992 -0.01299307 5 0.6651031 0.6594555 0.0056476 8.8199e-01 4.7460e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.5452e-01 7.0484e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.0049199 0.9175515 lowCoverage 1.00000 lowCoverage 0.6271186 0.7277992 -0.1021268 5 0.5504605 0.6594555 -0.1089950 9.8914e-01 8.1566e-04 weaklyHypometh 1.0000e+00 1.6313e-02 weaklyHypometh 9.8538e-01 1.8993e-02 weaklyHypometh 1.0000e+00 3.2191e-01 insignificant -0.0402659 4.4250e-01 lowCoverage 1.00000000 lowCoverage chr12 6604550 6605550 40536 CHD4 ENSG00000111642 0.7356949 574 17 0.632952 467 17 0.6064297 293 16 0.723663 448 18 0.607035 213 16 0.7361388 1010 18 0.5881480 319 16 0.7025914 258 16 0.7261302 247 16 0.7188236 214 15 0.6871648 1248 17 0.6475901 169 14 0.6128392 311 17 0.7334586 133 11 0.7444425 253 16 0.6478452 138 10 0.770939 698 12 0.786825 399 16 0.628204 314 13 0.7353396 691 18 0.6898977 140 11 0.8053865 203 12 0.585839 319 16 0.720302 214 15 0.7686042 193 14 0.6998822 496 17 0.7166343 214 14 0.665883 102 9 0.748088 281 11 0.7230991 455 17 0.6718381 484 17 0.783586 777 17 0.6103088 403 18 0.7375002 287 17 0.6267188 439 17 0.875000 87 7 0.5402649 319 17 0.6323759 453 17 0.7715777 472 15 0.7487063 554 17 0.73839816 485 18 0.8177931 370 18 0.7906540 908 17 0.7664258 0.7289149 0.6834038 0.7414613 0.7401313 0.7598115 0.6637120 0.7254220 0.6933427 0.7729494 0.7835887 0.7180553 0.7343471 0.8093056 0.7636035 0.7086915 0.7600873 0.8135981 0.6507534 0.777952 0.7617904 0.7572646 0.744219 0.7117558 0.74894157 0.7301624 0.7175269 0.7762125 0.7200507 0.7382628 0.7653583 0.7828736 0.6462598 0.7339897 0.7167921 0.861531 0.6570525 0.7073005 0.8116645 0.7893265 0.76399165 0.8292491 0.814220 8 0.748839 0.7650851 -0.00031652 17 0.697931 0.697897 3.3967e-05 0.1015733 9.1024e-02 insignificant 1 1.0000000 insignificant 0.746698 4.5994e-02 weaklyHypometh 1 1.000000 insignificant -0.02630737 0.2421850 insignificant 1 insignificant 0.748629 0.7162978 0.05540825 17 0.681834 0.6236568 0.05817750 2.1876e-05 9.9239e-01 weaklyHypermeth 3.4724e-04 1.0000e+00 weaklyHypermeth 1.3036e-01 6.9952e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01825132 7.2950e-01 insignificant 1.0000e+00 insignificant 0.749252 0.8042309 -0.0638970 17 0.700351 0.7943897 -9.4038e-02 9.9994e-01 3.0319e-06 weaklyHypometh 1.0000e+00 6.0638e-04 weaklyHypometh 9.9989e-01 7.0178e-05 weaklyHypometh 1.0000e+00 1.4036e-02 weaklyHypometh -0.08481313 9.8626e-04 weaklyHypometh 0.0986261 weaklyHypometh 0.7661666 0.7162978 0.05788182 17 0.721570 0.6236568 0.0979132 4.4092e-05 9.9682e-01 weaklyHypermeth 7.2280e-04 1.0000e+00 weaklyHypermeth 2.6419e-02 9.9261e-01 weaklyHypermeth 3.3870e-01 1.0000e+00 insignificant 0.04455868 4.1733e-01 insignificant 1.0000e+00 insignificant 0.7660348 0.8042309 -0.05950089 17 0.7058029 0.7943897 -0.0885869 9.9799e-01 2.0224e-05 weaklyHypometh 1.0000e+00 5.0559e-03 weaklyHypometh 9.9403e-01 6.4456e-03 weaklyHypometh 1.0000000 1.0000e+00 insignificant -0.0585058 0.0206435 weaklyHypometh 0.86015 insignificant 0.7170288 0.8042309 -0.1137429 17 0.6344097 0.7943897 -0.1599801 1.0000e+00 1.2881e-07 weaklyHypometh 1.0000e+00 5.3669e-06 weaklyHypometh 1.0000e+00 1.1260e-03 weaklyHypometh 1.0000e+00 3.3117e-02 weaklyHypometh -0.1030644 8.8338e-02 insignificant 1.00000000 insignificant chr12 6940850 6941850 40540 PTPN6 ENSG00000111679 0.0106685 207 7 0.067441 372 10 0.0457036 331 10 0.081117 306 9 0.148459 256 9 0.1086210 483 10 0.0669444 371 10 0.0557196 340 10 0.0490975 451 10 0.0899012 378 10 0.0536598 343 10 0.1234338 359 8 0.0290477 345 10 0.0250991 188 4 0.1504868 417 8 0.0447216 479 9 0.098217 159 8 0.053869 277 8 0.051765 298 9 0.0953146 325 10 0.0476348 236 10 0.0957143 139 4 0.063119 209 10 0.026111 222 8 0.1674731 124 5 0.0723745 437 10 0.0277979 183 9 0.013480 233 10 0.065769 249 10 0.1339136 526 10 0.1263766 377 8 0.074141 322 10 0.1361593 248 10 0.1100671 189 8 0.2286270 120 4 0.125000 24 2 0.1090140 285 10 0.0313839 268 10 0.1914635 324 10 0.1400581 290 8 0.08406225 193 5 0.1094444 191 6 0.1269336 265 10 0.0237121 0.0741803 0.0325123 0.0440138 0.0487387 0.0678400 0.0370348 0.0437011 0.0265584 0.0512675 0.0194255 0.0295209 0.0208759 0.0392230 0.0633651 0.0453060 0.0532745 0.0435317 0.0360556 0.054793 0.0349163 0.0786062 0.052050 0.0277778 0.09195123 0.0476826 0.0244046 0.0230468 0.0482395 0.0849386 0.1270303 0.0235677 0.2033872 0.2197040 0.2258458 0.067390 0.1067577 0.0307273 0.1235764 0.0833376 0.05004541 0.0661755 0.109611 5 0.059387 0.0703317 -0.01259894 10 0.073782 0.083001 -9.2187e-03 0.8903446 5.1578e-02 insignificant 1 1.0000000 insignificant 0.478002 5.3818e-01 insignificant 1 1.000000 insignificant -0.00369448 0.8214590 insignificant 1 insignificant 0.059387 0.1075838 -0.04071779 10 0.073782 0.1088642 -0.03508217 8.0502e-01 1.3938e-03 weaklyHypometh 1.0000e+00 1.6441e-01 insignificant 6.2137e-01 1.4475e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.05091093 1.1011e-01 insignificant 1.0000e+00 insignificant 0.059387 0.1100554 -0.0550281 8 0.073782 0.1409487 -6.7167e-02 6.0010e-01 1.7523e-10 weaklyHypometh 1.0000e+00 8.7616e-08 weaklyHypometh 6.8100e-01 4.2415e-04 weaklyHypometh 1.0000e+00 6.0592e-02 weaklyHypometh -0.05792811 2.6841e-02 weaklyHypometh 0.6790744 insignificant 0.0703317 0.1075838 -0.03035702 10 0.083001 0.1088642 -0.0258634 6.5619e-01 8.6974e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 5.1447e-01 2.8438e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04721645 1.4561e-01 insignificant 1.0000e+00 insignificant 0.0703317 0.1100554 -0.03974141 8 0.0830008 0.1409487 -0.0579479 6.5126e-01 9.3422e-05 weaklyHypometh 1.0000e+00 1.5570e-02 weaklyHypometh 7.4869e-01 1.2898e-02 weaklyHypometh 1.0000000 1.0000e+00 insignificant -0.0542336 0.0395989 weaklyHypometh 1.00000 insignificant 0.1075838 0.1100554 -0.0100636 8 0.1088642 0.1409487 -0.0320845 6.7698e-01 6.6921e-02 insignificant 1.0000e+00 6.5609e-01 insignificant 8.8495e-01 2.0882e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0070172 8.2884e-01 insignificant 1.00000000 insignificant chr12 8003850 8004850 40556 SLC2A3 ENSG00000059804 0.6709260 334 9 0.600940 205 9 0.5817328 166 9 0.630887 240 9 0.637431 131 9 0.6640254 500 9 0.4677690 156 9 0.6774130 179 9 0.4900766 158 5 0.6080313 162 5 0.6076819 289 9 0.4470289 119 4 0.6204177 167 9 0.7410714 31 2 0.6180556 169 9 0.4974747 104 4 0.453571 90 4 0.697772 211 9 0.710901 231 9 0.6880666 332 9 0.4880504 86 9 0.7157027 129 9 0.658037 196 9 0.712664 94 9 0.7495631 104 9 0.6663729 245 9 0.6004304 117 9 0.540000 51 4 0.622205 162 9 0.6061288 255 9 0.6393107 193 9 0.647810 425 9 0.4771959 156 9 0.5015284 147 9 0.7301865 150 9 0.567963 74 5 0.5604034 101 5 0.6553492 239 9 0.6787587 231 9 0.6937503 271 9 0.67633208 191 9 0.6034130 287 9 0.6950186 272 9 0.4482243 0.4437048 0.4176954 0.4436922 0.4055221 0.4677844 0.3329791 0.5058189 0.3798574 0.4501685 0.4658897 0.2784457 0.4325890 0.6506064 0.4328828 0.3300227 0.3601421 0.5082554 0.5705296 0.545920 0.4189630 0.5382921 0.474286 0.5703105 0.51584237 0.4885099 0.5120753 0.5324421 0.4767414 0.4529849 0.4551277 0.5014501 0.4010111 0.3407557 0.4983549 0.420514 0.5620520 0.5035367 0.5209200 0.4621333 0.53123502 0.4082790 0.545155 5 0.465274 0.5371901 -0.03738930 9 0.596555 0.562162 3.4394e-02 0.3853518 3.1659e-02 weaklyHypometh 1 1.0000000 insignificant 0.816109 4.0153e-03 weaklyHypometh 1 0.529143 insignificant -0.03162599 0.2895413 insignificant 1 insignificant 0.465140 0.5213379 0.00122054 9 0.559879 0.6718959 -0.11201736 1.2713e-03 8.2798e-01 weaklyHypermeth 1.6511e-02 1.0000e+00 weaklyHypermeth 8.6407e-02 7.5213e-01 insignificant 8.7990e-01 1.0000e+00 insignificant 0.02345925 6.0691e-01 insignificant 1.0000e+00 insignificant 0.465257 0.5479233 -0.0337520 9 0.615866 0.6951612 -7.9295e-02 9.4649e-01 1.1365e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8782e-01 1.1493e-02 weaklyHypometh 1.0000e+00 7.3835e-01 insignificant -0.06389088 2.6710e-02 weaklyHypometh 0.6790744 insignificant 0.5374514 0.5213379 0.03310646 9 0.613267 0.6718959 -0.0586285 4.1490e-02 9.4608e-01 weaklyHypermeth 3.7718e-01 1.0000e+00 insignificant 6.0527e-02 9.9654e-01 insignificant 6.1357e-01 1.0000e+00 insignificant 0.05508524 2.4931e-01 insignificant 1.0000e+00 insignificant 0.5377496 0.5479233 0.00356123 9 0.6412608 0.6951612 -0.0539004 6.2558e-01 4.2661e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.3269e-01 5.0532e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.0322649 0.2561070 insignificant 1.00000 insignificant 0.5207852 0.5479233 -0.0348402 9 0.6390855 0.6951612 -0.0560758 9.9400e-01 7.8323e-03 weaklyHypometh 1.0000e+00 1.0584e-01 insignificant 9.9889e-01 2.7388e-02 weaklyHypometh 1.0000e+00 4.1497e-01 insignificant -0.0873501 8.0021e-02 insignificant 1.00000000 insignificant chr12 8006250 8007250 40557 SLC2A3 ENSG00000059804 0.7519789 726 15 0.514443 457 15 0.6326641 375 15 0.792082 671 14 0.656968 251 15 0.6494404 983 15 0.6726288 315 14 0.6730104 343 15 0.7287209 462 15 0.6531454 419 15 0.6789678 653 15 0.7550911 317 15 0.7486946 406 15 0.8610345 198 12 0.7575608 319 15 0.5695124 199 9 0.685455 723 10 0.699939 700 15 0.748281 333 15 0.6763667 602 15 0.4982843 124 9 0.6447057 207 15 0.667775 435 15 0.601444 185 15 0.7088822 200 13 0.7440928 559 15 0.6410863 218 15 0.623483 135 9 0.677211 294 15 0.7158321 562 15 0.6456802 489 15 0.667525 814 15 0.6354001 438 15 0.5481563 230 15 0.5851673 565 15 0.764444 77 5 0.6231591 264 14 0.6707612 447 15 0.7198191 610 15 0.7229026 614 15 0.75216610 575 14 0.6765823 524 14 0.7068421 613 15 0.8378371 0.6904762 0.7521549 0.8578179 0.7182535 0.7870026 0.7573851 0.7871169 0.7726813 0.7915066 0.7465741 0.8222320 0.8455465 0.8378125 0.8169412 0.7572966 0.7668624 0.8146657 0.8219902 0.777470 0.6821490 0.7763317 0.785135 0.7110484 0.73187506 0.8017306 0.7248258 0.7906756 0.7652762 0.7972097 0.7699467 0.7948016 0.7249074 0.6975440 0.7702087 0.881454 0.7172502 0.7629746 0.8082214 0.8178223 0.80228614 0.8087713 0.827901 10 0.790309 0.7574609 0.00309401 15 0.691064 0.586532 1.0453e-01 0.0081670 8.7326e-01 weaklyHypermeth 1 1.0000000 insignificant 0.011192 9.6463e-01 weaklyHypermeth 1 1.000000 insignificant 0.04229909 0.1044490 insignificant 1 insignificant 0.790309 0.7337952 0.03044462 15 0.691064 0.5560835 0.13498003 2.1319e-05 9.8446e-01 weaklyHypermeth 3.4386e-04 1.0000e+00 weaklyHypermeth 2.3175e-02 9.5995e-01 weaklyHypermeth 3.0493e-01 1.0000e+00 insignificant 0.05745118 1.3902e-01 insignificant 1.0000e+00 insignificant 0.790757 0.8153951 -0.0291783 15 0.703969 0.7039592 9.8607e-06 9.6896e-01 8.0904e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7577e-01 2.6007e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02036322 3.4880e-01 insignificant 1.0000000 insignificant 0.7574609 0.7337952 0.02627959 15 0.586532 0.5560835 0.0304480 1.0115e-02 9.0621e-01 weaklyHypermeth 1.0647e-01 1.0000e+00 insignificant 4.1764e-01 5.9198e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01515208 6.8134e-01 insignificant 1.0000e+00 insignificant 0.7577625 0.8153951 -0.03283935 15 0.6185822 0.7039592 -0.0853771 9.9111e-01 1.1252e-02 weaklyHypometh 1.0000e+00 5.9965e-01 insignificant 9.6940e-01 1.2546e-02 weaklyHypometh 1.0000000 1.0000e+00 insignificant -0.0626623 0.0123424 weaklyHypometh 0.67453 insignificant 0.7359801 0.8153951 -0.0585163 15 0.6090439 0.7039592 -0.0949154 9.9986e-01 2.9442e-03 weaklyHypometh 1.0000e+00 4.8265e-02 weaklyHypometh 9.9337e-01 1.2740e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0778144 5.3075e-02 insignificant 0.81653329 insignificant chr12 8031450 8032450 40560 ENSG00000206636 0.6984660 255 5 0.457624 70 3 0.6142857 35 3 0.703054 165 5 0.737259 54 5 0.9500000 20 2 0.5965909 65 5 0.6742424 48 5 0.7172619 38 5 0.8000000 24 3 0.9044444 56 5 0.7661538 49 5 0.7121849 80 5 0.6872685 65 5 0.7355859 62 5 0.7857143 50 3 0.760000 62 3 0.643333 125 5 0.821429 14 1 0.3500000 11 0 0.7500000 8 0 0.8400000 13 2 0.577007 170 5 0.833333 20 2 0.8294118 38 2 0.5700000 23 3 0.5937500 19 0 0.866667 13 0 0.538961 65 5 0.4666667 15 2 0.4000000 11 0 0.900000 25 2 0.6539216 58 5 0.5192308 38 2 0.4416667 25 2 1.000000 4 0 0.3156566 25 2 0.7171429 38 3 0.6255446 212 5 0.6349053 237 5 0.80635769 202 5 0.7842105 146 5 0.6323074 206 5 0.8203874 0.6539960 0.6883117 0.7926779 0.6623906 0.9090909 0.7345041 0.6758953 0.8198052 0.9090909 0.8838384 0.7846154 0.9075630 0.8294192 0.8736313 0.9025974 0.8909091 0.8315152 0.9090909 0.636364 0.7659465 0.7090909 0.733739 0.7878788 0.82620321 0.6000000 0.8636364 0.7575758 0.7438017 0.7053405 0.5841283 0.8181818 0.7176471 0.6013986 0.4393939 0.886061 0.5523416 0.6766234 0.8093766 0.7610713 0.79943823 0.7655502 0.777584 0 0.762611 0.6928571 0.07372072 4 0.570581 0.480222 9.0359e-02 0.0023396 9.6337e-01 lowCoverage 1 1.0000000 lowCoverage 0.107456 3.3725e-01 lowCoverage 1 1.000000 lowCoverage 0.02526190 0.6718827 lowCoverage 1 lowCoverage 0.762611 0.6436170 0.14192467 2 0.570581 0.4871237 0.08345694 2.4225e-04 8.9768e-01 lowCoverage 3.5109e-03 1.0000e+00 lowCoverage 2.0436e-02 9.9176e-01 lowCoverage 2.7994e-01 1.0000e+00 lowCoverage 0.09780850 3.7769e-01 lowCoverage 1.0000e+00 lowCoverage 0.765846 0.7796610 -0.0082222 5 0.624046 0.6145754 9.4707e-03 5.9731e-01 5.2712e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.9458e-01 9.4486e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00907980 8.6140e-01 lowCoverage 1.0000000 lowCoverage 0.6928571 0.6436170 0.06156274 2 0.480222 0.4871237 -0.0069017 3.3855e-01 9.2443e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 2.2099e-01 9.9927e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.07254660 5.2955e-01 lowCoverage 1.0000e+00 lowCoverage 0.6954436 0.7796610 -0.07189685 4 0.4985831 0.6145754 -0.1159923 9.6607e-01 2.2573e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 4.0711e-01 7.6720e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage -0.0161821 0.8056275 lowCoverage 1.00000 lowCoverage 0.6505376 0.7796610 -0.1296323 2 0.5480142 0.6145754 -0.0665612 9.9997e-01 1.9253e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.8797e-01 2.6648e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0887287 4.3224e-01 lowCoverage 1.00000000 lowCoverage chr12 9356250 9357250 40587 DDX11L8 ENSG00000111788 0.8824762 333 7 0.784656 386 11 0.7583443 309 10 0.934774 248 4 0.754379 196 10 0.7206922 428 9 0.6695240 259 11 0.7525091 297 9 0.6848259 284 9 0.8172584 218 9 0.8232553 507 12 0.7115003 162 7 0.8050583 292 9 0.9295823 139 5 0.7175183 306 9 0.5027339 150 5 0.660877 124 7 0.867515 306 5 0.818296 433 9 0.7364930 347 9 0.6702141 166 9 0.8092400 131 7 0.702828 273 7 0.732826 205 9 0.7225114 138 7 0.7882521 415 10 0.6827434 268 9 0.774221 190 7 0.763161 322 10 0.7736288 423 10 0.8846781 360 10 0.768388 367 9 0.7012136 351 10 0.9248808 213 10 0.7857143 193 5 0.777557 67 4 0.5703148 293 11 0.8751849 346 9 0.9013516 326 9 0.8088460 312 9 0.94639379 243 4 0.6913964 320 4 0.7623582 332 6 0.8704959 0.8546054 0.8962699 0.9138020 0.8642715 0.9247528 0.8687465 0.8862262 0.8491177 0.9353060 0.9281529 0.8154123 0.9276944 0.8954902 0.9085153 0.8563067 0.8739731 0.9034693 0.8970961 0.913742 0.8792443 0.8202625 0.866933 0.8882850 0.91225491 0.9133012 0.8521152 0.9500871 0.8781096 0.9273715 0.9242160 0.9477168 0.8258071 0.9008466 0.9399911 0.772129 0.8878309 0.8378742 0.9247726 0.9172782 0.88666148 0.9360382 0.896095 3 0.876813 0.8854423 -0.00811579 9 0.776445 0.734044 4.2400e-02 0.7217333 2.8133e-01 insignificant 1 1.0000000 insignificant 0.928886 3.3650e-01 insignificant 1 1.000000 insignificant 0.01055573 0.7122127 insignificant 1 insignificant 0.876813 0.8549932 0.02456079 9 0.776445 0.6181695 0.15827501 2.6865e-02 1.4886e-01 weaklyHypermeth 2.5344e-01 1.0000e+00 insignificant 2.7579e-01 1.3462e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00586423 9.2003e-01 insignificant 1.0000e+00 insignificant 0.876770 0.9112851 -0.0224856 8 0.732000 0.7870934 -5.5093e-02 9.8034e-01 5.0924e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9817e-01 4.2286e-03 weaklyHypometh 1.0000e+00 3.9224e-01 insignificant -0.05545578 3.2136e-01 insignificant 1.0000000 insignificant 0.8854774 0.8544087 0.03528895 9 0.750666 0.5795339 0.1711326 2.8310e-01 7.5276e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.7577e-01 7.9250e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01641996 7.7264e-01 insignificant 1.0000e+00 insignificant 0.8865314 0.9112272 -0.01619616 8 0.7864760 0.7718858 0.0145902 9.4681e-01 2.5925e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9261e-01 1.1740e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.0660115 0.2358600 insignificant 1.00000 insignificant 0.8561644 0.9112272 -0.0522716 8 0.6623245 0.7718858 -0.1095614 9.1825e-01 6.8890e-02 insignificant 1.0000e+00 6.6883e-01 insignificant 9.9575e-01 1.4588e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0495915 4.9192e-01 insignificant 1.00000000 insignificant chr12 9462050 9463050 40589 ENSG00000186611 0.8249851 180 9 0.863123 133 9 0.7467520 143 9 0.742647 99 2 0.884799 119 4 0.8627280 184 8 0.8739686 159 5 0.8522034 136 9 0.7172252 86 5 0.9485115 139 9 0.8770184 416 9 0.7728484 133 5 0.9003199 187 9 0.8593103 49 5 0.8672293 170 9 0.9121032 131 5 0.885707 83 4 0.728848 115 6 0.872636 235 9 0.9086289 151 7 0.8666851 134 9 0.7597403 74 6 0.870937 146 9 0.887464 84 7 0.8361111 63 6 0.8650508 238 9 0.8561763 146 9 0.764286 60 5 0.877505 163 9 0.9210318 221 9 0.8758025 206 9 0.882770 202 9 0.8511856 179 9 0.8841066 146 9 0.9767442 97 6 0.954545 29 1 0.8478395 121 9 0.8238002 243 9 0.8272272 123 7 0.8500819 137 3 0.80076445 99 2 0.7186508 147 2 0.8487734 84 2 0.9053377 0.8125058 0.8182907 0.9127111 0.9148687 0.8635668 0.8313694 0.8724901 0.8615695 0.9217416 0.9116891 0.8557726 0.9310674 0.8746846 0.8638994 0.8745472 0.8744948 0.8340363 0.8905513 0.957629 0.9109779 0.8509772 0.894047 0.9019421 0.89862978 0.8466940 0.8455813 0.8744696 0.9123862 0.8833597 0.8735655 0.9201100 0.7554816 0.9064937 0.8788552 0.835983 0.8705208 0.6890150 0.8810276 0.9072212 0.85646600 0.8525224 0.804050 2 0.885133 0.8796776 -0.00782419 9 0.773491 0.787657 -1.4166e-02 0.9752486 2.9580e-01 insignificant 1 1.0000000 insignificant 0.962850 4.7242e-01 insignificant 1 1.000000 insignificant -0.01021700 0.6200254 insignificant 1 insignificant 0.885714 0.8282209 0.04794575 9 0.859434 0.8570041 0.00242996 3.5866e-03 2.8761e-01 weaklyHypermeth 4.2196e-02 1.0000e+00 weaklyHypermeth 1.0126e-01 7.6429e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04462398 1.6550e-01 insignificant 1.0000e+00 insignificant 0.885133 0.8644068 0.0226488 2 0.773491 0.7432099 3.0281e-02 2.5108e-02 9.9114e-01 lowCoverage 7.8462e-01 1.0000e+00 lowCoverage 5.7803e-01 7.7567e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.03598004 2.4612e-01 lowCoverage 1.0000000 lowCoverage 0.8801843 0.8282209 0.05175346 9 0.875174 0.8570041 0.0181700 7.6462e-04 1.6115e-01 weaklyHypermeth 1.0333e-02 1.0000e+00 weaklyHypermeth 7.5566e-02 1.2757e-01 insignificant 7.3365e-01 1.0000e+00 insignificant -0.03440698 2.6834e-01 insignificant 1.0000e+00 insignificant 0.8796776 0.8644068 0.01901947 2 0.7876567 0.7432099 0.0444469 1.3348e-02 9.9473e-01 lowCoverage 4.6026e-01 1.0000e+00 lowCoverage 4.5211e-01 8.3637e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage 0.0461970 0.1443378 lowCoverage 1.00000 lowCoverage 0.8282209 0.8658744 -0.0521322 2 0.8570041 0.8257887 0.0312154 1.3559e-01 7.2505e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 3.9841e-01 6.9277e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0806040 4.7835e-02 lowCoverage 0.76648757 lowCoverage chr12 12926950 12927950 40652 DDX47 ENSG00000213782 0.7181818 68 5 0.628171 69 5 0.7833333 19 1 0.760952 59 4 0.548864 52 4 0.6115385 53 4 0.7473684 29 1 0.7818681 62 5 0.6755556 41 5 0.7857143 28 4 0.6343954 83 4 0.8819444 25 1 0.7032788 71 5 0.5321970 51 4 0.7365079 43 5 0.3958333 19 1 1.000000 3 0 0.580952 64 6 0.692857 27 1 0.6888889 30 4 0.6833333 23 2 1.0000000 8 0 0.478704 50 4 0.831111 47 5 0.8392857 33 1 0.6534341 55 5 0.8840909 25 2 0.557143 23 1 0.669792 54 5 0.7457912 50 5 0.6793155 37 5 0.580087 46 4 0.7110753 84 5 0.6770833 38 4 0.7054545 50 5 0.875000 6 0 0.7955357 63 5 0.6319444 36 4 0.8480392 53 1 0.7328571 44 4 0.93755102 96 4 0.7866667 25 1 0.5809524 55 1 0.7757143 0.6943185 0.9266667 0.8436190 0.6511364 0.7926923 0.6905263 0.8050769 0.7044444 0.7800000 0.7765359 0.8888889 0.8193359 0.7524242 0.7911111 0.5766667 0.9590584 0.7078095 0.8350000 0.777778 0.8316667 1.0000000 0.756500 0.9022222 0.84142857 0.7254441 0.9575000 0.5600000 0.8538333 0.8600000 0.5595238 0.9400000 0.8278280 0.8416667 0.7826667 0.830000 0.7830000 0.7922222 0.9050000 0.9201429 0.89422857 0.7573333 0.747619 0 0.731073 0.7405765 -0.04989632 4 0.659907 0.595687 6.4220e-02 0.7289452 1.1005e-01 lowCoverage 1 1.0000000 lowCoverage 0.884169 2.4468e-01 lowCoverage 1 1.000000 lowCoverage -0.02242042 0.6721974 lowCoverage 1 lowCoverage 0.730594 0.7111913 -0.02037438 4 0.682129 0.7211317 -0.03900241 5.5598e-01 1.4802e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.2158e-01 1.9438e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.03826208 4.2465e-01 lowCoverage 1.0000e+00 lowCoverage 0.729609 0.8717949 -0.0908070 4 0.653916 0.7977627 -1.4385e-01 9.9260e-01 7.6243e-03 lowCoverage 1.0000e+00 4.2357e-01 lowCoverage 9.9822e-01 6.7791e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.08279315 2.5904e-01 lowCoverage 1.0000000 lowCoverage 0.7422222 0.7101449 0.03463932 5 0.670148 0.6862732 -0.0161250 5.2957e-01 6.6951e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.2264e-01 7.3429e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01584166 7.8177e-01 lowCoverage 1.0000e+00 lowCoverage 0.7405765 0.8713235 -0.05104040 4 0.5956873 0.7752919 -0.1796046 9.5969e-01 3.7668e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.6679e-01 6.2767e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage -0.0603727 0.4352828 lowCoverage 1.00000 lowCoverage 0.7101449 0.8708487 -0.0719247 4 0.6862732 0.7472034 -0.0609301 8.9184e-01 1.1622e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.5543e-01 3.7768e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0445311 5.4388e-01 lowCoverage 1.00000000 lowCoverage chr12 12927050 12928050 40653 DDX47 ENSG00000213782 0.7181818 68 5 0.628171 69 5 0.7833333 19 1 0.760952 59 4 0.548864 52 4 0.6115385 53 4 0.7473684 29 1 0.7818681 62 5 0.6755556 41 5 0.7857143 28 4 0.6343954 83 4 0.8819444 25 1 0.7032788 71 5 0.5321970 51 4 0.7365079 43 5 0.3958333 19 1 1.000000 3 0 0.580952 64 6 0.692857 27 1 0.6888889 30 4 0.6833333 23 2 1.0000000 8 0 0.478704 50 4 0.831111 47 5 0.8392857 33 1 0.6534341 55 5 0.8840909 25 2 0.557143 23 1 0.669792 54 5 0.7457912 50 5 0.6793155 37 5 0.580087 46 4 0.7110753 84 5 0.6770833 38 4 0.7054545 50 5 0.875000 6 0 0.7955357 63 5 0.6319444 36 4 0.8480392 53 1 0.7328571 44 4 0.93755102 96 4 0.7866667 25 1 0.5809524 55 1 0.7757143 0.6943185 0.9266667 0.8436190 0.6511364 0.7926923 0.6905263 0.8050769 0.7044444 0.7800000 0.7765359 0.8888889 0.8193359 0.7524242 0.7911111 0.5766667 0.9590584 0.7078095 0.8350000 0.777778 0.8316667 1.0000000 0.756500 0.9022222 0.84142857 0.7254441 0.9575000 0.5600000 0.8538333 0.8600000 0.5595238 0.9400000 0.8278280 0.8416667 0.7826667 0.830000 0.7830000 0.7922222 0.9050000 0.9201429 0.89422857 0.7573333 0.747619 0 0.731073 0.7405765 -0.04989632 4 0.659907 0.595687 6.4220e-02 0.7289452 1.1005e-01 lowCoverage 1 1.0000000 lowCoverage 0.884169 2.4468e-01 lowCoverage 1 1.000000 lowCoverage -0.02242042 0.6721974 lowCoverage 1 lowCoverage 0.730594 0.7111913 -0.02037438 4 0.682129 0.7211317 -0.03900241 5.5598e-01 1.4802e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.2158e-01 1.9438e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.03826208 4.2465e-01 lowCoverage 1.0000e+00 lowCoverage 0.729609 0.8717949 -0.0908070 4 0.653916 0.7977627 -1.4385e-01 9.9260e-01 7.6243e-03 lowCoverage 1.0000e+00 4.2357e-01 lowCoverage 9.9822e-01 6.7791e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.08279315 2.5904e-01 lowCoverage 1.0000000 lowCoverage 0.7422222 0.7101449 0.03463932 5 0.670148 0.6862732 -0.0161250 5.2957e-01 6.6951e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.2264e-01 7.3429e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01584166 7.8177e-01 lowCoverage 1.0000e+00 lowCoverage 0.7405765 0.8713235 -0.05104040 4 0.5956873 0.7752919 -0.1796046 9.5969e-01 3.7668e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.6679e-01 6.2767e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage -0.0603727 0.4352828 lowCoverage 1.00000 lowCoverage 0.7101449 0.8708487 -0.0719247 4 0.6862732 0.7472034 -0.0609301 8.9184e-01 1.1622e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.5543e-01 3.7768e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0445311 5.4388e-01 lowCoverage 1.00000000 lowCoverage chr12 12944350 12945350 40654 GPRC5A ENSG00000013588 0.5746154 48 3 0.641371 74 6 0.4729215 81 6 0.814951 51 3 0.584416 79 6 0.8897802 95 3 0.5282407 46 6 0.6928540 72 5 0.5788690 46 5 0.6267857 58 6 0.6388154 152 6 0.6000000 29 3 0.7131868 61 6 0.7666667 9 1 0.4833333 34 3 0.5147059 50 3 0.388889 35 3 0.803045 66 3 0.577778 68 6 0.7541546 80 3 0.5769841 43 4 0.7857143 22 3 0.481151 61 3 0.746939 48 3 0.8333333 17 1 0.7009717 80 4 0.6952381 30 1 0.950000 10 1 0.675926 65 4 0.7713591 110 6 0.8310783 100 5 0.520955 132 5 0.6365408 71 5 0.5010582 56 6 0.4810049 72 6 0.666667 7 0 0.5824074 47 4 0.8050239 99 5 0.5833333 33 3 0.7411817 82 3 0.63833992 70 3 0.9194444 34 3 0.8068627 54 3 0.8457358 0.8033319 0.6314700 0.8767583 0.6543478 0.8184259 0.6304348 0.8186985 0.8029891 0.8407609 0.8388033 0.8516625 0.7207358 0.7826087 0.7210145 0.8516625 0.5217391 0.8545315 0.8704710 0.767303 0.7727743 0.8571429 0.733566 0.9394410 0.89130435 0.8063563 0.7047101 0.8913043 0.8490338 0.8171937 0.7935587 0.8023595 0.8970252 0.5251898 0.6724744 0.782609 0.6648551 0.8171243 0.8007246 0.8163389 0.77985908 0.9338768 0.853900 0 0.637763 0.7423398 -0.09955303 5 0.655213 0.709352 -5.4139e-02 0.2388253 3.8418e-06 weaklyHypometh 1 0.0038418 weaklyHypometh 0.477993 3.9452e-02 weaklyHypometh 1 1.000000 insignificant -0.08186854 0.1078662 lowCoverage 1 lowCoverage 0.637763 0.6448864 -0.01068985 5 0.655213 0.6830597 -0.02784668 6.3227e-01 4.0810e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.0806e-01 8.2146e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02015192 7.3022e-01 lowCoverage 1.0000e+00 lowCoverage 0.637175 0.7802198 -0.0157697 3 0.597749 0.5515508 4.6198e-02 5.6101e-01 6.5406e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 5.7559e-01 5.7567e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.10556351 1.6288e-01 lowCoverage 1.0000000 lowCoverage 0.7423398 0.6448864 0.10160044 5 0.709352 0.6830597 0.0262924 2.2610e-02 8.0560e-01 weaklyHypermeth 2.1952e-01 1.0000e+00 insignificant 5.3390e-02 8.2556e-01 insignificant 5.8783e-01 1.0000e+00 insignificant 0.10202046 1.3076e-01 lowCoverage 1.0000e+00 lowCoverage 0.7426573 0.7802198 -0.00128929 3 0.7164663 0.5515508 0.1649155 1.0958e-01 7.7882e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 3.7716e-01 8.5132e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage -0.0236950 0.7496473 lowCoverage 1.00000 lowCoverage 0.6438746 0.7802198 -0.0660503 3 0.6302363 0.5515508 0.0786856 7.8446e-01 5.2899e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.1436e-01 5.6766e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.1257154 1.4092e-01 lowCoverage 1.00000000 lowCoverage chr12 12970850 12971850 40657 MIR614 ENSG00000207817 0.9105680 192 5 0.593043 350 11 0.5658009 151 9 0.905478 298 10 0.603889 82 7 0.5096717 451 10 0.4726557 167 11 0.7960743 224 9 0.4629356 144 8 0.6802948 114 6 0.8276678 135 6 0.5171137 108 7 0.6341976 205 8 0.4687500 60 5 0.7518461 180 8 0.5089286 82 5 0.770833 38 3 0.897413 306 11 0.635536 86 4 0.8099229 515 11 0.8705820 82 7 0.8743023 121 8 0.750044 178 9 0.573990 85 6 0.8663185 170 9 0.9300411 338 11 0.8906746 94 6 0.717902 74 6 0.896281 142 7 0.8417851 264 11 0.5972187 390 11 0.622622 450 11 0.4711155 202 10 0.3795664 119 7 0.5140781 327 6 0.317226 114 6 0.5155652 150 8 0.4388967 353 11 0.6897899 181 4 0.9459327 467 10 0.88031852 440 9 0.8013206 238 7 0.9129373 390 10 0.9128418 0.7860743 0.8064994 0.9609539 0.8759760 0.7587596 0.6541101 0.8936416 0.7834829 0.7796190 0.7767695 0.6939668 0.7728366 0.7394148 0.8687094 0.8246245 0.7256757 0.8931016 0.8826344 0.925602 0.9517364 0.8949529 0.906153 0.9264264 0.86830335 0.9093179 0.9385586 0.8202381 0.9028665 0.9302117 0.8833275 0.8739427 0.5963224 0.6126126 0.8447422 0.550678 0.7964257 0.7364778 0.9140226 0.9214931 0.91904368 0.8168714 0.916061 3 0.782295 0.8211144 -0.05168665 9 0.608424 0.702030 -9.3606e-02 0.9991130 1.7662e-02 weaklyHypometh 1 1.0000000 insignificant 0.999998 4.9180e-06 weaklyHypometh 1 0.004918 weaklyHypometh -0.11984912 0.0261855 weaklyHypometh 1 insignificant 0.782900 0.5478261 0.20946122 9 0.702028 0.4321040 0.26992382 2.8127e-14 9.9988e-01 hypermethylated 9.3755e-13 1.0000e+00 hypermethylated 3.0840e-04 9.9932e-01 hypermethylated 7.9076e-03 1.0000e+00 hypermethylated 0.22672306 1.6270e-04 hypermethylated 8.1351e-03 hypermethylated 0.782900 0.8857809 -0.1049387 8 0.702028 0.7468644 -4.4837e-02 9.9279e-01 1.3676e-02 weaklyHypometh 1.0000e+00 6.5124e-01 insignificant 9.9891e-01 1.1223e-04 weaklyHypometh 1.0000e+00 1.8705e-02 weaklyHypometh -0.17992882 1.1765e-02 weaklyHypometh 0.4622802 insignificant 0.8230834 0.5478261 0.27342930 9 0.737385 0.4321040 0.3052808 1.6613e-16 9.9999e-01 hypermethylated 9.2297e-15 1.0000e+00 hypermethylated 7.1249e-10 1.0000e+00 hypermethylated 1.7812e-07 1.0000e+00 hypermethylated 0.34657218 3.7424e-06 hypermethylated 3.4022e-04 hypermethylated 0.8230834 0.8857809 -0.06361409 8 0.7373849 0.7468644 -0.0094795 9.1779e-01 1.5808e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.9955e-01 6.3755e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.0600797 0.3336263 insignificant 1.00000 insignificant 0.5478261 0.8857809 -0.3177217 8 0.4321040 0.7468644 -0.3147603 9.9999e-01 5.9727e-16 hypomethylated 1.0000e+00 6.6363e-14 hypomethylated 9.9998e-01 1.4076e-06 hypomethylated 1.0000e+00 2.0772e-04 hypomethylated -0.4066519 1.2373e-04 hypomethylated 0.01124828 hypomethylated chr12 13145150 13146150 40662 GSG1 ENSG00000111305 0.0483312 1315 47 0.015344 1315 47 0.0378382 1694 48 0.030371 786 42 0.026876 1139 40 0.0671114 1661 44 0.0070515 1418 43 0.0067569 1198 44 0.0383640 1425 44 0.0104845 1601 43 0.0077622 1751 43 0.0058782 1514 43 0.0271761 1302 43 0.0052381 574 19 0.0097720 1746 44 0.0046278 1404 43 0.009425 815 31 0.037595 970 36 0.015501 1234 43 0.0331434 1458 47 0.0519441 761 37 0.0505731 736 31 0.028782 1079 48 0.017821 707 41 0.0116547 522 26 0.0390336 1901 48 0.0565364 1600 38 0.018377 811 39 0.020424 1083 43 0.0327476 1879 48 0.0125521 1709 48 0.023795 1465 48 0.0192563 1253 48 0.0257047 877 43 0.0473423 859 31 0.013975 269 15 0.0393077 628 41 0.0318909 1326 48 0.0266797 1475 44 0.0411848 1141 43 0.04884764 804 32 0.0448920 1035 37 0.0407462 1005 38 0.0129080 0.0079110 0.0081335 0.0089873 0.0064915 0.0152243 0.0070332 0.0040309 0.0100364 0.0104302 0.0084899 0.0087829 0.0048116 0.0083047 0.0111232 0.0033834 0.0052789 0.0122899 0.0036897 0.016608 0.0173331 0.0132987 0.023789 0.0049604 0.00735944 0.0058800 0.0082011 0.0102183 0.0080735 0.0094640 0.0029515 0.0114507 0.0108743 0.0367209 0.0427335 0.015670 0.0298785 0.0090463 0.0122903 0.0171467 0.01470246 0.0087775 0.020512 27 0.012956 0.0165579 -0.00175617 43 0.032090 0.038221 -6.1315e-03 0.9467055 8.2297e-01 insignificant 1 1.0000000 insignificant 0.983993 9.1731e-01 insignificant 1 1.000000 insignificant -0.00812095 0.1880529 insignificant 1 insignificant 0.012925 0.0247506 -0.00887616 43 0.032880 0.0322331 0.00064676 9.9768e-01 4.0401e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9885e-01 9.8661e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00734717 2.7552e-01 insignificant 1.0000e+00 insignificant 0.012922 0.0155678 -0.0048772 43 0.029530 0.0414682 -1.1938e-02 9.9384e-01 9.8843e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9901e-01 4.2426e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01823774 4.5652e-03 weaklyHypometh 0.2685415 insignificant 0.0164349 0.0247506 -0.00661446 46 0.034568 0.0322331 0.0023352 9.8289e-01 7.5676e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9269e-01 9.7710e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00077378 9.1180e-01 insignificant 1.0000e+00 insignificant 0.0164349 0.0155678 -0.00409197 43 0.0317850 0.0414682 -0.0096832 9.9899e-01 3.7048e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9988e-01 8.2692e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.0101168 0.1092147 insignificant 1.00000 insignificant 0.0247791 0.0155706 0.0039949 43 0.0340238 0.0422361 -0.0082122 9.9999e-01 9.7565e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.0000e+00 9.9488e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0108906 1.2057e-01 insignificant 1.00000000 insignificant chr12 13179850 13180850 40664 GSG1 ENSG00000111305 0.7113594 270 7 0.541282 101 7 0.5730227 151 6 0.650510 244 6 0.649151 83 7 0.7971073 307 7 0.7726070 117 6 0.6094584 152 7 0.5539432 187 5 0.6415450 95 6 0.7480377 86 6 0.6679736 72 5 0.3927231 225 5 0.5775776 73 5 0.5394433 138 5 0.6922902 47 6 0.408772 86 5 0.324354 309 5 0.673708 106 6 0.6358353 205 6 0.7528345 53 7 0.6127351 141 6 0.784049 211 6 0.505628 59 5 0.6833619 128 7 0.7873616 221 7 0.6343567 99 5 0.590873 63 5 0.565944 176 5 0.7279782 164 5 0.4539541 177 6 0.662244 218 6 0.0000000 209 7 0.0000000 151 7 0.0277778 14 1 0.000000 43 5 0.0166667 96 6 0.0000000 231 5 0.6782660 336 7 0.5778461 271 7 0.60282101 256 6 0.6141459 187 5 0.5711654 297 6 0.7914158 0.5470044 0.5071377 0.7010509 0.6608621 0.8093364 0.7525060 0.6379441 0.5523488 0.7671968 0.7390423 0.5966823 0.3932521 0.5792891 0.5512281 0.7918040 0.4086785 0.3258014 0.6997494 0.714247 0.7790980 0.5856678 0.753792 0.5033990 0.70934294 0.7858449 0.6055633 0.5953739 0.5614486 0.7721706 0.5250342 0.6765881 0.0000000 0.0000000 0.0000000 0.000000 0.0228137 0.0000000 0.7779098 0.5983419 0.62074012 0.6133544 0.587105 5 0.612639 0.6660819 -0.05229369 6 0.625295 0.664973 -3.9678e-02 0.9719382 9.1610e-02 insignificant 1 1.0000000 insignificant 0.935530 2.2280e-01 insignificant 1 1.000000 insignificant -0.03874164 0.3601224 insignificant 1 insignificant 0.612639 0.0040323 0.61324355 6 0.625295 0.0061080 0.61918702 3.5207e-39 1.0000e+00 hypermethylated 7.0414e-37 1.0000e+00 hypermethylated 2.1201e-15 1.0000e+00 hypermethylated 7.0671e-13 1.0000e+00 hypermethylated 0.60062762 2.9322e-15 hypermethylated 5.8644e-13 hypermethylated 0.612639 0.6354863 -0.0323253 6 0.625295 0.6276367 -2.3417e-03 4.5951e-01 1.8673e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.7123e-01 2.2059e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00081385 9.8099e-01 insignificant 1.0000000 insignificant 0.6660819 0.0040323 0.66468973 6 0.664973 0.0061080 0.6588646 2.1609e-38 1.0000e+00 hypermethylated 1.0276e-35 1.0000e+00 hypermethylated 4.7530e-14 1.0000e+00 hypermethylated 1.5843e-11 1.0000e+00 hypermethylated 0.63936925 2.0145e-10 hypermethylated 6.7149e-08 hypermethylated 0.6660819 0.6354863 0.01866211 6 0.6649725 0.6276367 0.0373359 1.9983e-01 6.7462e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.2991e-01 3.5006e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.0379278 0.3128002 insignificant 1.00000 insignificant 0.0040323 0.6354863 -0.6379828 7 0.0061080 0.6276367 -0.6215287 1.0000e+00 2.3234e-31 hypomethylated 1.0000e+00 2.3234e-28 hypomethylated 1.0000e+00 2.4710e-09 hypomethylated 1.0000e+00 6.1775e-07 hypomethylated -0.6014415 2.0126e-06 hypomethylated 0.00064676 hypomethylated chr12 19781750 19782750 40801 ENSG00000200885 0.7083333 63 5 0.510317 73 5 0.6153846 64 5 0.541550 90 5 0.600000 55 5 0.3236144 148 5 0.6088235 84 5 0.6317949 73 5 0.5874126 57 5 0.4333333 30 5 0.3437500 107 5 0.4333333 47 5 0.5500000 40 5 0.5714286 35 5 0.6257353 81 5 0.4000000 10 0 0.480000 22 2 0.581905 71 5 0.588235 84 5 0.6300238 101 5 0.3000000 9 0 0.6000000 29 5 0.514286 35 5 0.603175 32 5 0.5000000 10 0 0.5850150 182 5 0.5000000 20 0 0.550000 17 0 0.666818 48 5 0.7785417 127 5 0.5321637 93 5 0.537143 174 5 0.4279691 110 5 0.6134259 42 5 0.6120879 68 5 0.533333 13 0 0.4476190 36 5 0.5543024 96 5 0.5400000 99 5 0.4777778 90 5 0.60021786 87 5 0.5500000 60 5 0.6000000 90 5 0.5113636 0.5867965 0.5839161 0.5357992 0.5826446 0.4934204 0.5835561 0.6156177 0.5712015 0.4090909 0.5270661 0.4267677 0.5397727 0.5519481 0.6001003 0.3863636 0.4318182 0.5491342 0.5695187 0.517621 0.3889362 0.5833333 0.538961 0.5238095 0.50000000 0.5660183 0.5000000 0.5340909 0.6596074 0.6256818 0.5116959 0.5155844 0.4161234 0.5189394 0.5791708 0.484848 0.4169372 0.5332080 0.5022727 0.4393939 0.48306595 0.5340909 0.560606 0 0.566292 0.5747423 -0.01029705 5 0.490373 0.669426 -1.7905e-01 0.8160964 1.1549e-01 insignificant 1 1.0000000 insignificant 0.730418 1.5674e-01 insignificant 1 1.000000 insignificant -0.01734639 0.6699747 lowCoverage 1 lowCoverage 0.567119 0.5260274 0.04813575 5 0.512164 0.5956692 -0.08350526 2.5161e-02 8.8266e-01 weaklyHypermeth 2.4194e-01 1.0000e+00 insignificant 1.2663e-01 9.0097e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00679247 8.6795e-01 lowCoverage 1.0000e+00 lowCoverage 0.567119 0.5399061 0.0262982 5 0.512164 0.6142499 -1.0209e-01 1.5333e-01 4.8544e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.8840e-01 4.6030e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01535037 6.4398e-01 lowCoverage 1.0000000 lowCoverage 0.5743855 0.5260274 0.05726476 5 0.642567 0.5956692 0.0468982 4.4676e-02 9.9709e-01 weaklyHypermeth 3.9889e-01 1.0000e+00 insignificant 1.6421e-01 9.7170e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02413885 6.0839e-01 lowCoverage 1.0000e+00 lowCoverage 0.5743855 0.5399061 0.03579866 5 0.6425674 0.6142499 0.0283175 3.6424e-02 6.3036e-01 weaklyHypermeth 9.1184e-01 1.0000e+00 insignificant 1.3988e-01 4.7939e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.0019960 0.9606769 lowCoverage 1.00000 lowCoverage 0.5260274 0.5399061 -0.0215951 5 0.5956692 0.6142499 -0.0185807 8.9231e-01 4.7724e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.2248e-01 7.9608e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0221428 5.8983e-01 lowCoverage 1.00000000 lowCoverage chr12 22988750 22989750 40903 ETNK1 ENSG00000139163 0.8633289 491 16 0.826261 136 7 0.7440771 149 12 0.872296 423 16 0.703128 118 12 0.7918962 436 16 0.7615656 127 11 0.8396296 108 7 0.7215201 91 8 0.9233631 108 10 0.8463018 252 16 0.7939255 77 9 0.8426872 182 9 NA 0 0 0.9115709 122 12 0.8965335 64 6 0.713285 93 8 0.860911 430 16 0.847510 208 14 0.7643062 334 16 0.8458333 46 3 0.8073071 152 13 0.854972 213 12 0.798901 77 6 0.9147727 151 13 0.8218492 299 15 0.7224101 65 6 0.891026 38 3 0.779240 127 9 0.8659770 281 15 0.8571316 247 13 0.826387 469 17 0.6792107 138 10 0.8335329 155 11 0.8098320 323 16 0.839426 87 10 0.7172258 64 6 0.8164078 234 15 0.8821600 449 16 0.8981931 562 16 0.86385980 436 16 0.9018782 385 16 0.8895327 502 16 0.8576542 0.8559093 0.8194891 0.8440390 0.8747619 0.8722307 0.8971174 0.8855556 0.7907375 0.9562137 0.8789822 0.8584030 0.8855519 NA 0.8523884 0.8560645 0.7237567 0.8970176 0.8643234 0.865567 0.7494309 0.8682513 0.865020 0.7954168 0.84105163 0.8353029 0.8259202 0.9174797 0.8463041 0.9072253 0.8433408 0.8482085 0.6365259 0.7710146 0.7943015 0.859477 0.7345708 0.8366980 0.9235548 0.8997142 0.88609815 0.9002214 0.869945 4 0.857107 0.8494226 0.00630429 14 0.798702 0.852478 -5.3775e-02 0.4944733 6.6189e-01 insignificant 1 1.0000000 insignificant 0.839019 1.0203e-01 insignificant 1 1.000000 insignificant -0.01509289 0.4888097 insignificant 1 insignificant 0.857107 0.7872128 0.07259893 15 0.798702 0.8011688 -0.00246656 5.0011e-08 9.9993e-01 weaklyHypermeth 1.1630e-06 1.0000e+00 weaklyHypermeth 9.6892e-04 8.9206e-01 weaklyHypermeth 2.0615e-02 1.0000e+00 weaklyHypermeth 0.03445187 3.0501e-01 insignificant 1.0000e+00 insignificant 0.857324 0.9048843 -0.0353285 15 0.845685 0.8906926 -4.5008e-02 9.9997e-01 4.4555e-03 weaklyHypometh 1.0000e+00 3.5340e-01 insignificant 9.9945e-01 9.1832e-03 weaklyHypometh 1.0000e+00 6.5595e-01 insignificant -0.07006706 4.2142e-04 weaklyHypometh 0.0625220 weaklyHypometh 0.8494226 0.7872128 0.06485183 14 0.852478 0.8011688 0.0513088 1.7430e-04 9.9998e-01 weaklyHypermeth 2.6014e-03 1.0000e+00 weaklyHypermeth 3.6747e-03 9.9899e-01 weaklyHypermeth 6.3358e-02 1.0000e+00 weaklyHypermeth 0.04954475 1.5164e-01 insignificant 1.0000e+00 insignificant 0.8493530 0.9048843 -0.03820759 14 0.8437998 0.8906926 -0.0468928 9.9735e-01 1.8969e-02 weaklyHypometh 1.0000e+00 9.4845e-01 insignificant 8.0638e-01 5.8575e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.0549742 0.0046150 weaklyHypometh 0.46150 insignificant 0.7870000 0.9048843 -0.1053150 15 0.7894728 0.8906926 -0.1012197 9.9991e-01 3.4215e-09 weaklyHypometh 1.0000e+00 1.9008e-07 weaklyHypometh 9.9880e-01 1.1994e-05 weaklyHypometh 1.0000e+00 7.4962e-04 weaklyHypometh -0.1045189 1.1534e-02 weaklyHypometh 0.32039697 insignificant chr12 26157850 26158850 40969 RASSF8 ENSG00000123094 0.0023384 1757 45 0.039017 1150 49 0.0225540 1386 49 0.025216 1207 36 0.019557 725 33 0.0153189 2289 48 0.0057560 1126 44 0.0025000 894 45 0.0598677 997 42 0.0013736 958 44 0.0261544 1031 42 0.0989681 1808 45 0.0016120 837 44 0.0023923 292 11 0.0021570 1323 44 0.0081799 896 41 0.010856 612 37 0.029528 1311 42 0.016469 906 42 0.0170587 1795 48 0.0031529 423 33 0.0047954 754 30 0.010406 1248 46 0.019969 511 31 0.0023392 529 35 0.0083565 1629 49 0.0058460 853 37 0.060637 468 32 0.033017 780 39 0.0051845 1614 49 0.0081524 1504 49 0.010626 1990 48 0.0305137 924 40 0.0058600 948 39 0.0000000 711 21 0.000000 458 29 0.0873910 677 34 0.0056179 1440 46 0.0030268 2567 45 0.0083598 1844 48 0.00093085 1422 45 0.0200118 1727 45 0.0101310 1638 40 0.0023635 0.0164136 0.0022065 0.0075773 0.0175704 0.0098304 0.0091908 0.0045324 0.0465728 0.0019229 0.0209296 0.0765502 0.0037114 0.0124916 0.0024177 0.0059900 0.0110957 0.0047413 0.0117570 0.016066 0.0050375 0.0041461 0.010234 0.0170473 0.00306993 0.0073318 0.0082518 0.0403079 0.0079747 0.0047857 0.0042949 0.0069856 0.0276575 0.0021858 0.0083058 0.000000 0.0323814 0.0029291 0.0029129 0.0042272 0.00073575 0.0145743 0.015046 27 0.043863 0.0088596 0.03341506 48 0.089956 0.015829 7.4127e-02 0.3331109 9.9986e-01 insignificant 1 1.0000000 insignificant 0.998075 9.9966e-01 insignificant 1 1.000000 insignificant 0.00597022 0.4149196 insignificant 1 insignificant 0.043708 0.0081427 0.02518943 45 0.046793 0.0288430 0.01795023 4.4651e-01 9.9012e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7323e-01 9.8785e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00122006 9.3735e-01 insignificant 1.0000e+00 insignificant 0.043753 0.0075016 0.0365220 45 0.046678 0.0080586 3.8619e-02 1.2229e-01 8.6489e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8353e-01 2.5262e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01185165 7.2754e-02 insignificant 1.0000000 insignificant 0.0088697 0.0081427 -0.00075644 46 0.017495 0.0288430 -0.0113478 9.9685e-01 9.9589e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9820e-01 9.9977e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00719028 6.4333e-01 insignificant 1.0000e+00 insignificant 0.0088134 0.0075016 0.00123620 45 0.0099446 0.0080586 0.0018859 9.8820e-01 9.9863e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9988e-01 9.7708e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.0058814 0.3357085 insignificant 1.00000 insignificant 0.0077745 0.0075016 0.0010181 42 0.0128810 0.0080586 0.0048224 9.9856e-01 9.5051e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9999e-01 9.0202e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0130717 4.0008e-01 insignificant 1.00000000 insignificant chr12 28019050 28020050 41033 PTHLH ENSG00000087494 0.0103410 1300 34 0.0410607 1271 37 0.0490034 1522 36 0.0188342 589 21 0.0370052 1106 37 0.0136220 1183 35 0.0358469 1643 37 0.0080099 1082 37 0.0141023 1560 35 0.0154913 1381 34 0.0108273 1329 37 0.0489230 1702 34 0.0124898 1243 34 0.0000000 99 6 0.0171352 1472 34 0.0065387 1459 34 0.0401243 1559 34 0.0689508 633 25 0.0050602 772 35 0.077220 1078 33 0.018567 444 33 0.0328562 582 22 0.0526208 991 35 0.0544872 495 34 0.0165231 413 21 0.0072678 1583 37 0.0401123 694 37 0.019973 410 28 0.01272173 796 34 0.0068096 1641 37 0.0072442 1328 37 0.011008 1643 35 0.0047558 1272 35 0.01894874 951 35 0.0821138 826 29 0.01741623 411 25 0.033368 373 33 0.0278282 1211 37 0.0069254 1549 35 0.0068226 1317 35 0.0190973 891 23 0.00517134 953 24 0.0139614 1053 32 0.0128383 0.0154236 0.05478030 0.0128281 0.0149339 0.0151963 0.0145381 0.0081451 0.0131280 0.0141235 0.0157702 0.0184787 0.0167781 NA 0.0153553 0.0082475 0.0091059 0.0258796 0.0037435 0.023018 0.0181654 0.0191470 0.025674 0.0068509 1.1591e-02 0.0076462 0.0098794 0.017506 0.0119856 0.0063760 0.0046150 0.0140649 0.0033702 0.0180851 0.01634678 0.00836049 0.0441642 0.0305550 0.0064030 0.0062583 0.00969539 0.0104283 0.0140318 21 0.0152614 0.0117156 0.00394605 35 0.097450 0.040019 0.05743082 0.15096457 9.9255e-01 insignificant 1.000000 1.0000000 insignificant 0.15057299 9.9987e-01 insignificant 1.00000 1.000000 insignificant 0.0031800 0.6545065 insignificant 1 insignificant 0.0152229 0.0247967 -9.3481e-03 35 0.107240 0.0218164 0.0854240 2.5689e-01 9.1096e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8290e-02 9.9993e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00420918 7.3739e-01 insignificant 1.0000e+00 insignificant 0.014980 0.0081555 0.0071937 33 0.027682 0.0084368 0.01924510 1.3248e-03 9.9505e-01 weaklyHypermeth 0.10000891 1.0000e+00 insignificant 1.5522e-02 9.9990e-01 weaklyHypermeth 1.000000 1.0000e+00 insignificant 1.6134e-02 0.0083551 weaklyHypermeth 0.77563 insignificant 0.0116226 0.0247868 -0.01195885 35 0.028280 0.0208679 0.00741169 8.3240e-01 9.7131e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3768e-01 9.9826e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0073892 5.6083e-01 insignificant 1.0000e+00 insignificant 0.0115539 0.0081555 0.00293155 33 0.028970 0.0084368 0.0205332 2.3886e-01 9.2664e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.4440e-01 9.6392e-01 insignificant 1.000000 1.000000 insignificant 0.0129537 0.0378893 weaklyHypermeth 1.00000 insignificant 0.0248262 0.0081555 0.01596149 33 0.0252611 0.0084368 0.0168243 7.2098e-01 6.7099e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.6722e-01 8.5215e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.0343e-02 1.2674e-01 insignificant 1.0000000 insignificant chr12 30840350 30841350 41089 CAPRIN2 ENSG00000110888 0.0337745 1426 30 0.0040800 1080 34 0.0027174 1621 34 0.0643882 765 22 0.0371648 983 28 0.0105763 2153 35 0.0450461 1486 28 0.0196175 1115 28 0.0067831 1459 28 0.0342135 1651 28 0.0049017 1129 28 0.0389813 1313 28 0.0399251 1189 28 0.0662526 569 15 0.0051071 1339 28 0.0145444 1278 28 0.0052634 865 22 0.0163416 1305 28 0.0019395 965 28 0.035564 1537 28 0.045257 511 26 0.0374144 532 16 0.0486758 1076 34 0.0640416 427 27 0.0039966 316 17 0.0553637 1577 34 0.0471914 777 28 0.045602 580 27 0.00090068 892 28 0.0039626 1644 34 0.0020509 1606 34 0.057737 1664 35 0.0140886 1045 33 0.03481754 974 28 0.0874396 497 15 0.00000000 398 24 0.034619 466 30 0.0033916 1350 36 0.0032834 1788 29 0.0260673 1366 34 0.0516827 969 23 0.00111282 1506 24 0.0328190 1093 25 0.0154553 0.0031015 0.00074955 0.0020697 0.0033008 0.0149240 0.0040519 0.0050710 0.0068013 0.0035846 0.0080653 0.0060362 0.0082704 0.0081632 0.0058503 0.0269772 0.0081398 0.0060833 0.0059056 0.013659 0.0094725 0.0202450 0.016691 0.0098342 8.3696e-03 0.0047169 0.0129899 0.016631 0.0021783 0.0073543 0.0048712 0.0041484 0.0025372 0.0011577 0.02701604 0.00000000 0.0251709 0.0079416 0.0046316 0.0043200 0.00005448 0.0032383 0.0109693 18 0.0066202 0.0080166 -0.00042381 33 0.068430 0.052828 0.01560174 0.53784833 7.5522e-01 insignificant 1.000000 1.0000000 insignificant 0.91287572 9.5580e-01 insignificant 1.00000 1.000000 insignificant -0.0099903 0.2464221 insignificant 1 insignificant 0.0065818 0.0046521 3.2186e-03 33 0.079365 0.0446917 0.0346732 8.1842e-02 1.0000e+00 insignificant 7.5084e-01 1.0000e+00 insignificant 3.8172e-01 1.0000e+00 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00470029 7.4688e-01 insignificant 1.0000e+00 insignificant 0.006660 0.0041667 0.0032185 25 0.090652 0.0389462 0.05170618 1.6926e-01 1.0000e+00 insignificant 1.00000000 1.0000e+00 insignificant 6.6321e-01 1.0000e+00 insignificant 1.000000 1.0000e+00 insignificant 1.3660e-03 0.9008940 insignificant 1.00000 insignificant 0.0077626 0.0044407 0.00377268 33 0.032030 0.0214359 0.01059384 7.5027e-01 1.0000e+00 insignificant 1.0000e+00 1.0000e+00 insignificant 7.2294e-01 1.0000e+00 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0052900 7.3212e-01 insignificant 1.0000e+00 insignificant 0.0080214 0.0038714 0.00378966 25 0.055286 0.0175019 0.0377837 7.3795e-01 1.0000e+00 insignificant 1.0000e+00 1.0000e+00 insignificant 7.8985e-01 1.0000e+00 insignificant 1.000000 1.000000 insignificant 0.0113563 0.3617187 insignificant 1.00000 insignificant 0.0046531 0.0041704 0.00027279 27 0.0457558 0.0417281 0.0040277 1.0000e+00 1.0000e+00 insignificant 1.0000e+00 1.0000e+00 insignificant 1.0000e+00 1.0000e+00 insignificant 1.0000e+00 1.0000e+00 insignificant 6.0663e-03 7.1745e-01 insignificant 1.0000000 insignificant chr12 31122950 31123950 41094 ENSG00000212533 0.6723467 332 11 0.4021842 140 5 0.6311144 114 8 0.8207626 198 11 0.5786492 65 8 0.7059633 365 11 0.6305688 103 8 0.6353202 138 8 0.6205610 73 5 0.7330357 77 8 0.7890068 223 8 0.6266770 65 6 0.6435516 124 8 0.6666667 18 3 0.6267857 100 8 0.6759259 49 6 0.6063783 200 9 0.6490209 160 10 0.6896098 161 8 0.712274 306 11 0.697702 56 5 0.6138903 88 6 0.7728920 173 11 0.6585859 61 5 0.7886364 71 8 0.6706581 220 8 0.6884381 91 8 0.834848 45 5 0.61413531 123 5 0.6877410 238 8 0.7066938 185 8 0.758442 331 11 0.6972509 107 8 0.57159409 127 8 0.6882927 149 9 0.68178231 103 8 0.716049 72 4 0.5464365 157 8 0.7982643 400 11 0.8001472 396 11 0.7155444 258 11 0.68087956 225 9 0.6922512 295 11 0.7603376 0.5964927 0.73324036 0.8374299 0.7610388 0.7165247 0.6730103 0.8102022 0.6567365 0.8140676 0.7946789 0.6827835 0.7279550 0.7508728 0.7220184 0.7487277 0.6603053 0.7637775 0.7989449 0.764979 0.7577846 0.7445800 0.802748 0.7265788 8.5145e-01 0.7315966 0.7153364 0.837732 0.6831008 0.7802930 0.7299904 0.7663050 0.7712191 0.6509051 0.74531519 0.73367824 0.8367260 0.6160427 0.8506952 0.8255074 0.74280926 0.7941739 0.7506815 3 0.7396214 0.7556480 -0.01374935 8 0.702431 0.722034 -0.01960289 0.94861516 3.6297e-01 insignificant 1.000000 1.0000000 insignificant 0.95490954 1.4399e-01 insignificant 1.00000 1.000000 insignificant -0.0519018 0.0687866 insignificant 1 insignificant 0.7383279 0.6881119 4.6918e-02 8 0.691514 0.6299295 0.0615847 3.5178e-03 9.2250e-01 weaklyHypermeth 4.5686e-02 1.0000e+00 weaklyHypermeth 2.4378e-01 9.1801e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00558581 8.7641e-01 insignificant 1.0000e+00 insignificant 0.739521 0.7662008 -0.0466245 8 0.695927 0.7757058 -0.07977907 9.7217e-01 4.2531e-03 weaklyHypometh 1.00000000 3.8665e-01 insignificant 9.9609e-01 2.3070e-03 weaklyHypometh 1.000000 5.7675e-01 insignificant -8.1597e-02 0.0315666 weaklyHypometh 1.00000 insignificant 0.7549020 0.6881119 0.06429713 8 0.686180 0.6299295 0.05625088 1.7489e-03 9.4450e-01 weaklyHypermeth 2.6907e-02 1.0000e+00 weaklyHypermeth 2.7880e-01 9.7883e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0574876 1.3704e-01 insignificant 1.0000e+00 insignificant 0.7558070 0.7662008 -0.03397343 8 0.725725 0.7757058 -0.0499804 9.8768e-01 2.2459e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9638e-01 1.3317e-01 insignificant 1.000000 1.000000 insignificant -0.0296954 0.3855493 insignificant 1.00000 insignificant 0.6872370 0.7792692 -0.09962680 8 0.5962867 0.7803265 -0.1840398 1.0000e+00 1.3545e-03 weaklyHypometh 1.0000e+00 2.5556e-02 weaklyHypometh 9.9996e-01 6.1968e-02 insignificant 1.0000e+00 8.6066e-01 insignificant -8.7183e-02 5.2955e-02 insignificant 0.8405479 insignificant chr12 31147250 31148250 41095 ENSG00000212533 0.9468919 154 3 0.8985450 103 6 0.8612523 97 7 0.9122088 162 3 0.8948513 77 7 0.9301743 244 7 0.8592390 90 7 0.9598314 169 10 0.9045408 81 6 0.9210927 84 7 0.9231391 296 10 0.8392857 36 3 0.9411826 147 7 0.8894819 87 6 0.9343333 108 4 0.9675000 61 7 1.0000000 44 2 0.9131720 177 6 0.9416142 147 5 0.960884 199 6 0.861111 59 4 0.7878788 37 4 0.9227273 61 3 0.9794737 69 5 0.9567901 76 4 0.9653970 242 9 0.8497337 118 6 0.821429 31 2 0.93941036 184 7 0.9629828 244 7 0.9505878 179 7 0.955781 151 9 0.8773810 96 4 0.99459459 105 6 0.9895833 180 5 0.96969697 35 2 0.895344 119 6 0.7781632 195 6 0.9487179 100 3 0.9187302 132 6 0.9598342 148 2 0.84230820 237 2 0.9459150 86 3 0.9098685 0.7963203 0.84041146 0.9512031 0.7992684 0.9214349 0.8493910 0.8875665 0.8649838 0.8674929 0.8470596 0.7925251 0.9102897 0.8160090 0.8540909 0.9318182 NA 0.8982510 0.8902675 0.981447 0.9393939 0.7148760 0.867149 0.9380383 9.2424e-01 0.9094478 0.8147941 0.922078 0.8540961 0.9182937 0.9061136 0.9514506 0.8009740 0.9705160 0.95413223 0.85123967 0.8367484 0.6842498 0.9230769 0.9513420 0.90733605 0.8768960 0.8411765 1 0.8966055 0.9172414 -0.01413896 6 0.927682 0.951231 -0.02354914 0.99123941 1.8104e-02 weaklyHypometh 1.000000 1.0000000 insignificant 0.99504932 4.2678e-02 weaklyHypometh 1.00000 1.000000 insignificant 0.0071859 0.7334011 insignificant 1 insignificant 0.8966055 0.8904110 5.3195e-03 6 0.927682 0.8892698 0.0384124 3.3949e-03 9.7528e-02 weaklyHypermeth 4.4669e-02 1.0000e+00 weaklyHypermeth 5.4603e-01 1.2064e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00250054 9.4621e-01 lowCoverage 1.0000e+00 lowCoverage 0.888502 0.8933144 -0.0147236 3 0.908473 0.9112123 -0.00273963 3.8562e-01 1.4227e-01 lowCoverage 1.00000000 1.0000e+00 lowCoverage 9.7996e-01 7.8747e-02 lowCoverage 1.000000 1.0000e+00 lowCoverage -3.1401e-03 0.8966096 lowCoverage 1.00000 lowCoverage 0.9172414 0.8904110 0.03179061 6 0.951231 0.8892698 0.06196158 2.3268e-02 7.7287e-01 weaklyHypermeth 2.6745e-01 1.0000e+00 insignificant 4.9685e-01 9.3101e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0046853 9.0759e-01 lowCoverage 1.0000e+00 lowCoverage 0.9132653 0.8933144 -0.00209576 3 0.927978 0.9112123 0.0167660 1.1122e-01 3.9137e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.1895e-01 4.2542e-01 lowCoverage 1.000000 1.000000 lowCoverage -0.0103259 0.7231978 lowCoverage 1.00000 lowCoverage 0.8914616 0.8933144 -0.01845177 3 0.9038336 0.9112123 -0.0073787 1.8205e-01 2.7481e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 5.1116e-01 4.5263e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -5.6406e-03 8.9240e-01 lowCoverage 1.0000000 lowCoverage chr12 32056250 32057250 41130 C12orf35 ENSG00000174718 0.5510204 46 7 0.5379318 87 5 0.6607143 46 5 0.6607143 42 5 0.5657081 103 7 0.5182540 70 5 0.6071429 67 2 0.4967532 63 5 0.5280612 25 2 0.5529762 45 7 0.6256483 145 5 0.7222222 44 7 0.6868958 60 2 0.6616954 64 7 0.6587302 69 7 0.2857143 11 0 0.6111111 16 0 0.5952381 28 1 0.4500000 20 0 0.500000 20 0 0.576429 35 5 0.7142857 17 0 0.4374083 70 7 0.7281250 51 6 0.6666667 17 0 0.6644444 46 5 0.7380952 28 3 0.500000 11 0 0.63766234 32 2 0.5904762 77 5 0.6250000 42 5 0.480519 59 5 0.5870748 59 7 0.45714286 35 5 0.6653846 73 7 0.40000000 5 0 0.625850 28 2 0.6666667 36 5 0.6000000 31 5 0.5000000 52 5 0.6556777 68 5 0.46153846 26 2 0.5333333 30 5 0.4378882 0.4393649 0.49456522 0.7119565 0.5978261 0.5952381 0.5942029 0.5602767 0.4565217 0.6211180 0.5420286 0.7130435 0.6739130 0.6397516 0.6618357 0.2173913 0.4927536 0.6359080 0.4021739 0.456522 0.5520186 0.5652174 0.377329 0.7010870 4.9275e-01 0.6352657 0.6014493 0.514349 0.6739130 0.6057971 0.6304348 0.4347826 0.5745342 0.4347826 0.59113712 0.34782609 0.5942029 0.5776398 0.4260870 0.4652174 0.62820513 NA 0.5072464 0 0.5901027 0.6000000 -0.00978833 5 0.607489 0.611220 -0.00373059 0.91782558 7.5058e-01 insignificant 1.000000 1.0000000 insignificant 0.92359442 3.6849e-01 insignificant 1.00000 1.000000 insignificant -0.0394327 0.2880448 lowCoverage 1 lowCoverage 0.5888993 0.5889831 -1.4337e-04 5 0.590581 0.5951220 -0.0045405 5.2568e-01 6.6005e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.9317e-01 6.7257e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00680671 8.9748e-01 lowCoverage 1.0000e+00 lowCoverage 0.588899 0.5555556 0.0313410 5 0.590581 0.5591164 0.03146511 2.8495e-01 8.9462e-01 insignificant 1.00000000 1.0000e+00 insignificant 2.9391e-01 8.9699e-01 insignificant 1.000000 1.0000e+00 insignificant 2.3717e-02 0.5824736 lowCoverage 1.00000 lowCoverage 0.6008316 0.5889831 0.01024803 5 0.595378 0.5951220 0.00025598 1.8935e-01 8.2829e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8629e-02 8.6070e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0462394 4.1555e-01 lowCoverage 1.0000e+00 lowCoverage 0.6008316 0.5555556 0.04350082 5 0.595378 0.5591164 0.0362616 1.7128e-01 9.2800e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.1030e-02 8.8983e-01 insignificant 1.000000 1.000000 insignificant 0.0631494 0.1929006 lowCoverage 1.00000 lowCoverage 0.5889831 0.5555556 0.03093904 5 0.5951220 0.5591164 0.0360056 5.0199e-01 8.1486e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.9404e-01 9.5852e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.6910e-02 7.7625e-01 lowCoverage 1.0000000 lowCoverage chr12 32442950 32443950 41141 ENSG00000207176 0.0052996 993 27 0.0062274 859 30 0.0030451 966 35 0.0004329 870 25 0.0077237 909 33 0.0571918 1290 30 0.0082303 1201 33 0.0048253 850 32 0.0041986 1290 34 0.0092472 1784 35 0.0318036 937 31 0.0034829 1507 36 0.0430026 1207 31 0.0000000 523 16 0.0034235 1568 34 0.0263048 1209 36 0.0155414 849 32 0.0030364 924 31 0.0037593 503 26 0.017125 1024 28 0.014407 248 17 0.0005787 581 26 0.0079193 824 34 0.0306878 539 27 0.0000000 377 16 0.0021770 1130 32 0.0461184 591 26 0.020954 461 24 0.04171627 638 34 0.0172794 1124 32 0.0014208 1085 31 0.031510 1304 28 0.0065807 781 30 0.00451287 459 30 0.0000000 750 30 0.00857195 253 15 0.078289 366 24 0.0014541 974 35 0.0317044 1363 33 0.0270270 929 36 0.0012448 944 34 0.00087712 832 22 0.0025462 1003 23 0.0052830 0.0135437 0.00324158 0.0013747 0.0159575 0.0184035 0.0152347 0.0093542 0.0067110 0.0020518 0.0114015 0.0030516 0.0060883 0.0013644 0.0035141 0.0073526 0.0101778 0.0025490 0.0058967 0.022020 0.0164633 0.0020174 0.014335 0.0091024 5.5133e-05 0.0032197 0.0121183 0.023461 0.0143913 0.0061089 0.0016130 0.0074080 0.0138821 0.0073924 0.00039596 0.01447791 0.0153658 0.0043721 0.0077635 0.0000000 0.00366509 0.0025875 0.0085483 17 0.0074778 0.0083127 -0.00011252 29 0.038775 0.029035 0.00974060 0.83946825 8.2575e-01 insignificant 1.000000 1.0000000 insignificant 0.87604502 9.7439e-01 insignificant 1.00000 1.000000 insignificant -0.0052023 0.3846177 insignificant 1 insignificant 0.0074318 0.0078147 -8.1985e-04 30 0.029387 0.0214173 0.0079701 9.8619e-01 9.9920e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8584e-01 9.9994e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00387311 7.7416e-01 insignificant 1.0000e+00 insignificant 0.007300 0.0043384 0.0026095 32 0.030612 0.0245741 0.00603769 5.7287e-01 1.0000e+00 insignificant 1.00000000 1.0000e+00 insignificant 6.4133e-01 1.0000e+00 insignificant 1.000000 1.0000e+00 insignificant 1.5164e-05 0.9984856 insignificant 1.00000 insignificant 0.0083221 0.0078147 -0.00038143 29 0.030325 0.0214173 0.00890764 9.9391e-01 9.9412e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9878e-01 9.9988e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0013292 9.2333e-01 insignificant 1.0000e+00 insignificant 0.0081127 0.0043384 0.00291566 28 0.021315 0.0245741 -0.0032590 8.9039e-01 1.0000e+00 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3038e-01 1.0000e+00 insignificant 1.000000 1.000000 insignificant 0.0052175 0.5488285 insignificant 1.00000 insignificant 0.0075567 0.0043393 0.00280742 29 0.0122047 0.0252208 -0.0130161 9.9526e-01 1.0000e+00 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9952e-01 1.0000e+00 insignificant 1.0000e+00 1.0000e+00 insignificant 3.8883e-03 7.9120e-01 insignificant 1.0000000 insignificant chr12 32465950 32466950 41142 ENSG00000207176 0.6901065 206 8 0.6458187 107 5 0.5500000 100 8 0.7864011 194 8 0.6107143 80 8 0.7510050 315 8 0.6735673 140 8 0.5562160 137 8 0.5990014 70 4 0.6379121 90 5 0.7458403 255 8 0.8112698 79 5 0.6625000 74 7 0.6558442 32 4 0.7267018 133 8 0.7713370 49 5 0.7980519 47 5 0.7369457 160 8 0.7825651 191 8 0.747767 268 8 0.641214 52 4 0.7782051 72 7 0.6841281 129 8 0.6563492 57 4 0.6743056 57 5 0.8112917 272 8 0.6856410 69 7 0.708851 54 5 0.81018419 125 7 0.7638891 224 8 0.7374687 199 8 0.786244 274 8 0.5885248 81 5 0.62459207 109 8 0.5690315 171 8 0.45568182 41 3 0.825983 76 7 0.6725114 184 8 0.7525622 236 8 0.8392133 201 8 0.7275812 176 8 0.76420113 193 8 0.6877746 190 8 0.7677317 0.7681690 0.70025084 0.8082972 0.7455357 0.8326209 0.7796118 0.7925595 0.8735795 0.7159012 0.8137470 0.8104244 0.9073822 0.7797068 0.8050151 0.8380913 0.7939260 0.8087797 0.8592389 0.808257 0.7612004 0.8615315 0.786151 0.7575699 7.7657e-01 0.8260568 0.8167317 0.805316 0.8439324 0.8325652 0.8103910 0.8164836 0.7080230 0.6433946 0.72579248 0.50362319 0.8496795 0.7345643 0.8252716 0.8734810 0.82490942 0.8240442 0.8544407 1 0.7726439 0.7897727 -0.01066348 8 0.700199 0.774542 -0.07434367 0.98418586 1.6240e-01 insignificant 1.000000 1.0000000 insignificant 0.92215261 2.4476e-01 insignificant 1.00000 1.000000 insignificant -0.0311694 0.2245909 insignificant 1 insignificant 0.7725432 0.6827795 8.1289e-02 8 0.680238 0.6559284 0.0243098 2.2889e-05 9.8757e-01 weaklyHypermeth 4.4018e-04 1.0000e+00 weaklyHypermeth 1.2621e-03 9.6287e-01 weaklyHypermeth 2.8685e-02 1.0000e+00 weaklyHypermeth 0.07425750 2.1098e-01 insignificant 1.0000e+00 insignificant 0.772543 0.7891566 -0.0270728 8 0.680238 0.7691473 -0.08890909 9.8427e-01 1.1640e-01 insignificant 1.00000000 1.0000e+00 insignificant 9.9417e-01 1.1020e-01 insignificant 1.000000 1.0000e+00 insignificant -5.7288e-02 0.0963092 insignificant 1.00000 insignificant 0.7896071 0.6827795 0.08954174 8 0.762784 0.6559284 0.10685551 2.1337e-06 9.9619e-01 weaklyHypermeth 5.2041e-05 1.0000e+00 weaklyHypermeth 4.8713e-04 9.9818e-01 weaklyHypermeth 1.2491e-02 1.0000e+00 weaklyHypermeth 0.1054269 9.2996e-02 insignificant 1.0000e+00 insignificant 0.7896071 0.7891566 -0.01405558 8 0.762784 0.7691473 -0.0063633 8.0366e-01 3.0446e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4343e-01 3.4815e-01 insignificant 1.000000 1.000000 insignificant -0.0261189 0.4161136 insignificant 1.00000 insignificant 0.6827795 0.7891566 -0.10557373 8 0.6559284 0.7691473 -0.1132189 9.9993e-01 2.5463e-04 weaklyHypometh 1.0000e+00 5.9215e-03 weaklyHypometh 9.9999e-01 2.2875e-04 weaklyHypometh 1.0000e+00 9.6932e-03 weaklyHypometh -1.3155e-01 5.0401e-02 insignificant 0.8405479 insignificant chr12 32585550 32586550 41148 FGD4 ENSG00000139132 0.7260310 125 5 0.7571429 33 2 0.6777778 25 2 0.7914456 187 5 0.7812500 57 4 0.8221497 120 6 0.6937622 54 3 0.5947980 76 5 0.5954545 35 2 0.7666667 48 3 0.8116344 145 5 0.2500000 17 2 0.6500000 54 3 0.8168998 48 6 0.5775735 43 3 0.7500000 19 2 1.0000000 4 0 0.6133333 160 5 0.6372651 87 5 0.821154 78 4 0.866667 22 2 0.5000000 6 0 0.6670815 89 6 0.8901515 26 2 0.8222934 87 5 0.6025655 108 5 0.4200000 40 2 0.430556 14 0 0.76875902 93 6 0.8526611 84 5 0.7738562 48 3 0.452632 42 2 0.4912067 91 5 0.39583333 33 2 0.5848214 69 2 0.66666667 78 3 0.411989 140 5 0.5820629 54 2 0.6579365 123 5 0.4486663 65 2 0.7123469 154 5 0.77218964 74 3 0.7588474 156 7 0.5946003 0.6428571 0.69444444 0.5340557 0.7500000 0.6049107 0.6812865 0.6111111 0.7272727 0.7791667 0.6110398 0.5000000 0.8750000 0.7342657 0.6102941 0.8750000 NA 0.5833333 0.6375000 0.615385 0.6666667 0.5000000 0.646104 0.7803030 6.2251e-01 0.6538462 0.5500000 0.666667 0.7321429 0.8666667 0.5882353 0.6315789 0.7142857 0.5937500 0.54687500 0.66666667 0.6410114 0.3705534 0.6317460 0.5223325 0.57352941 0.4887586 0.6035714 2 0.7024735 0.7192716 -0.01442645 5 0.617409 0.613579 0.00383006 0.51612243 4.8106e-01 insignificant 1.000000 1.0000000 insignificant 0.65866577 5.0095e-01 insignificant 1.00000 1.000000 insignificant 0.0361151 0.5686339 lowCoverage 1 lowCoverage 0.7055477 0.6623656 4.5996e-02 5 0.715511 0.5885667 0.1269444 1.4192e-03 9.3534e-01 weaklyHypermeth 1.9178e-02 1.0000e+00 weaklyHypermeth 9.2239e-03 9.4812e-01 weaklyHypermeth 1.5903e-01 1.0000e+00 insignificant 0.18462026 6.0758e-03 lowCoverage 1.5989e-01 lowCoverage 0.702473 0.6818182 0.0201225 5 0.617409 0.6376389 -0.02022994 2.3109e-01 2.0034e-01 insignificant 1.00000000 1.0000e+00 insignificant 3.3311e-01 1.7952e-01 insignificant 1.000000 1.0000e+00 insignificant 3.6720e-02 0.6046443 lowCoverage 1.00000 lowCoverage 0.7201835 0.6623656 0.06215234 5 0.673224 0.5885667 0.08465686 4.0827e-02 9.7880e-01 weaklyHypermeth 4.1661e-01 1.0000e+00 insignificant 1.6741e-01 9.9537e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.1485052 4.6006e-02 lowCoverage 8.0410e-01 lowCoverage 0.7192716 0.6818182 0.02976031 5 0.613579 0.6376389 -0.0240600 7.1132e-01 4.5573e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.0218e-01 6.7373e-01 insignificant 1.000000 1.000000 insignificant 0.0006045 0.9940313 lowCoverage 1.00000 lowCoverage 0.6623656 0.6824561 -0.02540485 5 0.5885667 0.6720486 -0.0834819 8.4264e-01 4.6372e-02 weaklyHypometh 1.0000e+00 5.1525e-01 insignificant 9.7964e-01 6.1068e-02 insignificant 1.0000e+00 8.6011e-01 insignificant -1.4790e-01 7.9596e-02 lowCoverage 1.0000000 lowCoverage chr12 32950850 32951850 41151 PKP2 ENSG00000057294 0.5660317 52 5 0.4805195 76 5 0.6384416 45 5 0.7177778 49 5 0.5791589 40 3 0.6081197 69 5 0.6180556 29 3 0.6071429 30 3 0.4666667 11 0 0.5768707 34 5 0.6685185 113 5 0.3166667 17 0 0.6754545 47 5 0.8200000 35 5 0.5820346 42 5 0.4444444 10 0 0.5113636 26 2 0.5153061 37 1 0.6481481 35 3 0.619048 46 5 0.166667 4 0 0.7500000 4 0 0.5500000 36 5 0.4000000 21 3 0.8500000 29 1 0.6593615 74 5 0.9375000 7 0 0.800000 9 0 0.52820513 59 3 0.5835042 75 5 0.6206349 56 3 0.461714 55 5 0.2909774 44 3 0.44000000 28 5 0.6351241 52 5 0.63333333 9 0 0.666667 32 3 0.6334524 61 4 0.6095238 49 5 0.6269231 68 5 0.7752315 60 5 0.48214286 28 3 0.6868839 65 5 0.6647362 0.5854247 0.70831871 0.7684685 0.6804142 0.7098060 0.6295045 0.6428571 0.6126126 0.6492921 0.7307933 0.3198198 0.6901106 0.8567568 0.6623962 0.5540541 0.6508823 0.5434363 0.6522523 0.733591 NA 0.6972158 0.673649 0.4279279 8.7838e-01 0.7401354 0.7323939 0.846847 0.5996188 0.6843916 0.8053411 0.5777992 0.4987198 0.5486486 0.62865063 0.64864865 0.6869369 0.7107143 0.6949807 0.7291522 0.79245495 0.6264479 0.7490460 0 0.6488731 0.6666667 0.01454986 3 0.555348 0.496276 0.05907149 0.47032531 8.3250e-01 lowCoverage 1.000000 1.0000000 lowCoverage 0.93124681 7.3697e-01 lowCoverage 1.00000 1.000000 lowCoverage -0.0259771 0.6996085 lowCoverage 1 lowCoverage 0.6496437 0.6194690 4.2129e-02 5 0.634683 0.4891963 0.1454870 1.6318e-01 9.5736e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.2643e-01 9.3620e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03306281 6.3395e-01 lowCoverage 1.0000e+00 lowCoverage 0.649583 0.7148148 -0.0274191 5 0.629353 0.6974402 -0.06808755 9.0765e-01 2.1801e-01 insignificant 1.00000000 1.0000e+00 insignificant 9.6258e-01 5.4509e-02 insignificant 1.000000 1.0000e+00 insignificant -5.3153e-02 0.3615997 lowCoverage 1.00000 lowCoverage 0.6682243 0.6194690 0.03216350 3 0.567173 0.4891963 0.07797672 2.9430e-01 8.8956e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 3.2245e-01 9.8920e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0590399 5.0848e-01 lowCoverage 1.0000e+00 lowCoverage 0.6682353 0.7148148 -0.04204429 3 0.550591 0.6974402 -0.1468495 9.5659e-01 2.1127e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.4735e-01 3.5446e-01 lowCoverage 1.000000 1.000000 lowCoverage -0.0271755 0.7327128 lowCoverage 1.00000 lowCoverage 0.6222222 0.7148148 -0.06853697 5 0.5707290 0.6974402 -0.1267113 9.5652e-01 2.3710e-02 weaklyHypometh 1.0000e+00 3.1197e-01 insignificant 9.9661e-01 4.2911e-02 weaklyHypometh 1.0000e+00 6.6016e-01 insignificant -8.6215e-02 2.9951e-01 lowCoverage 1.0000000 lowCoverage chr12 41153550 41154550 41226 ENSG00000207142 0.6075973 147 6 0.4640915 71 6 0.2789116 25 1 0.6556437 118 6 0.7142857 35 5 0.6223159 109 6 0.2952381 35 4 0.6691087 86 6 0.3148148 27 3 0.6833333 22 1 0.6082381 132 6 0.8333333 7 0 0.5889819 65 6 0.6203704 52 6 0.6666667 36 3 0.7500000 9 0 0.4000000 5 0 0.6642863 140 4 0.5885549 82 6 0.540260 90 6 0.733333 25 4 0.7000000 7 0 0.6135531 57 6 0.5492424 46 4 0.5852941 67 5 0.6114719 72 6 0.6916667 38 5 0.527778 26 2 0.60989011 102 6 0.6783069 94 6 0.5710317 61 6 0.661631 94 6 0.5621212 55 6 0.60672269 66 5 0.5432660 83 6 0.66666667 15 0 0.553813 81 6 0.5072150 77 6 0.6348104 101 5 0.6058782 107 5 0.6852141 119 5 0.52525253 41 3 0.5411616 109 5 0.5866857 0.5447639 0.29100529 0.6718107 0.7248677 0.6527030 0.4148148 0.6853887 0.2654321 0.6222222 0.6271193 0.8888889 0.5601630 0.6358025 0.6666667 0.7777778 0.3856101 0.6391544 0.6769569 0.642424 0.7111111 0.6503884 0.617013 0.5883838 6.0261e-01 0.6399711 0.7000000 0.574074 0.5989011 0.7156966 0.5695767 0.6757646 0.5969697 0.5437908 0.53748597 0.69236813 0.6001452 0.6167228 0.6473398 0.6260194 0.66087151 0.5521886 0.5493266 0 0.6125290 0.6400581 -0.01406986 6 0.574707 0.608617 -0.03390994 0.85478854 2.4726e-01 insignificant 1.000000 1.0000000 insignificant 0.88868697 2.3734e-01 insignificant 1.00000 1.000000 insignificant -0.0494650 0.2149840 lowCoverage 1 lowCoverage 0.6125290 0.5782493 4.3761e-02 6 0.574707 0.5289272 0.0457800 8.6675e-02 9.6918e-01 insignificant 7.8795e-01 1.0000e+00 insignificant 3.7788e-01 8.7363e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00500089 9.0426e-01 lowCoverage 1.0000e+00 lowCoverage 0.615144 0.6352201 0.0026424 5 0.614936 0.6145264 0.00040971 6.5558e-01 7.5435e-01 insignificant 1.00000000 1.0000e+00 insignificant 4.5036e-01 8.8977e-01 insignificant 1.000000 1.0000e+00 insignificant -2.0162e-02 0.6619189 lowCoverage 1.00000 lowCoverage 0.6400581 0.5782493 0.05742990 6 0.608617 0.5289272 0.07968991 2.9665e-02 9.9082e-01 weaklyHypermeth 3.2599e-01 1.0000e+00 insignificant 2.3374e-01 9.7881e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0544659 9.0425e-02 lowCoverage 1.0000e+00 lowCoverage 0.6404658 0.6352201 0.02151199 5 0.626720 0.6145264 0.0121935 2.3280e-01 8.6910e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.4088e-02 9.4663e-01 insignificant 1.000000 1.000000 insignificant 0.0293032 0.4289849 lowCoverage 1.00000 lowCoverage 0.5802139 0.6352201 -0.02923866 5 0.5615262 0.6145264 -0.0530002 9.5193e-01 2.8694e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.6771e-01 7.5774e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -2.5163e-02 5.2004e-01 lowCoverage 1.0000000 lowCoverage chr12 43871450 43872450 41257 ENSG00000199556 0.5360847 61 5 0.6222078 59 5 0.7000000 19 1 0.4902857 43 3 0.6801948 43 5 0.7642424 57 3 0.6019048 37 4 0.6522222 71 4 0.4483333 27 3 0.6944444 19 1 0.6731092 67 5 0.3047619 21 3 0.7825000 52 4 0.8285714 32 3 0.6392857 34 2 0.6500000 10 0 0.3863636 44 2 0.6967593 55 5 0.7841270 44 5 0.655238 54 5 0.791667 9 0 1.0000000 2 0 0.5678363 48 5 0.7333333 19 3 0.7647059 23 1 0.6546032 70 5 0.8000000 13 1 1.000000 7 1 0.53984848 53 3 0.7345029 63 5 0.6482051 53 5 0.696190 54 5 0.6308862 60 5 0.48333333 28 3 0.5492063 42 3 0.56666667 10 1 0.737500 41 3 0.6032609 77 5 0.4871111 48 3 0.6472727 61 5 0.6893333 64 5 0.53727273 40 3 0.5862857 49 5 0.6593109 0.7278271 0.81707317 0.6423693 0.7562163 0.8385070 0.7312427 0.6986992 0.5335366 0.7764228 0.7635103 0.5203252 0.7698171 0.8954704 0.6337108 0.6890244 0.7115587 0.8160569 0.8466899 0.771196 0.8719512 NA 0.695407 0.7723577 7.8766e-01 0.7677120 0.8780488 0.942316 0.7031596 0.8381115 0.7594747 0.7775842 0.6865563 0.5873984 0.55168409 0.67073171 0.7411731 0.7302113 0.6404336 0.7458980 0.76373984 0.6398004 0.7321254 0 0.6855124 0.7391304 -0.01341909 3 0.655042 0.547267 0.10777515 0.61896763 4.9257e-01 lowCoverage 1.000000 1.0000000 lowCoverage 0.89248906 2.3902e-01 lowCoverage 1.00000 1.000000 lowCoverage -0.1147092 0.0366702 lowCoverage 1 lowCoverage 0.6855124 0.6085271 8.8248e-02 4 0.655042 0.6263186 0.0287236 2.2922e-02 9.8480e-01 lowCoverage 2.3390e-01 1.0000e+00 lowCoverage 4.9183e-02 9.7909e-01 lowCoverage 6.3055e-01 1.0000e+00 lowCoverage 0.03438958 4.7205e-01 lowCoverage 1.0000e+00 lowCoverage 0.685647 0.6908397 0.0123039 5 0.652717 0.6350807 0.01763663 5.8031e-01 8.0912e-01 insignificant 1.00000000 1.0000e+00 insignificant 4.8582e-01 8.9557e-01 insignificant 1.000000 1.0000e+00 insignificant 4.0077e-02 0.4171703 lowCoverage 1.00000 lowCoverage 0.7391304 0.6085271 0.10141078 3 0.547267 0.6263186 -0.07905159 6.3268e-03 9.9940e-01 lowCoverage 8.3248e-02 1.0000e+00 lowCoverage 1.2649e-02 9.9459e-01 lowCoverage 2.2998e-01 1.0000e+00 lowCoverage 0.1490988 1.5161e-02 lowCoverage 3.6097e-01 lowCoverage 0.7409201 0.6908397 0.02440001 3 0.656720 0.6350807 0.0216398 2.8811e-01 8.8251e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.6925e-02 9.9443e-01 lowCoverage 1.000000 1.000000 lowCoverage 0.1547859 0.0149963 lowCoverage 1.00000 lowCoverage 0.6070039 0.6908397 -0.07897793 4 0.5515824 0.6350807 -0.0834983 9.9336e-01 8.3366e-02 lowCoverage 1.0000e+00 8.5067e-01 lowCoverage 9.8659e-01 1.7249e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 5.6871e-03 9.1304e-01 lowCoverage 1.0000000 lowCoverage chr12 43942150 43943150 41262 ANO6 ENSG00000177119 0.9047619 37 5 0.8387879 33 4 0.8982517 41 3 0.8142857 36 5 0.7800505 37 4 0.8171524 138 5 0.7179487 40 3 0.8476190 26 3 0.7766667 24 3 0.8303030 38 3 0.7956712 104 3 0.9259259 27 3 0.7618182 34 3 NA 0 0 0.7310490 39 3 0.9166667 23 3 0.7000000 26 3 0.8450000 35 3 0.9714286 28 3 0.769195 136 5 0.777778 28 3 0.7000000 18 2 0.8295238 47 3 0.9444444 13 1 0.6666667 3 0 0.8767857 49 5 0.6800000 34 3 0.937500 19 2 0.82000000 22 3 0.6400000 32 5 0.8011111 62 5 0.784123 152 5 0.5054545 37 3 0.84884615 53 5 0.6678571 29 3 0.83333333 11 0 0.625000 17 2 0.7057143 27 3 0.7444444 28 3 0.7928571 44 5 0.7950000 25 3 0.61666667 35 3 0.9100000 15 1 0.8989418 0.8747475 0.89467754 0.8111111 0.8021324 0.8437512 0.9339031 0.8698413 0.8522222 0.8868687 0.9100465 0.9131422 0.8834343 NA 0.8931935 0.9017224 0.7444444 0.9022222 0.9619048 0.815948 0.9580247 0.5666667 0.893333 0.9493722 5.4624e-01 0.9132937 0.7644444 0.933333 0.8303704 0.7311111 0.8477778 0.8444922 0.6472727 0.8929487 0.72658730 0.87407407 0.7222222 0.6903175 0.8135802 0.8746032 0.76944444 0.7148148 0.9244444 0 0.8259424 0.7974948 0.02081803 5 0.815357 0.794312 0.02104483 0.25517290 8.5403e-01 insignificant 1.000000 1.0000000 insignificant 0.38752915 8.8629e-01 insignificant 1.00000 1.000000 insignificant 0.0351327 0.3151731 lowCoverage 1 lowCoverage 0.8259424 0.7471264 9.7378e-02 3 0.815357 0.7184971 0.0968602 1.2820e-04 9.9904e-01 lowCoverage 2.2894e-03 1.0000e+00 lowCoverage 2.3900e-03 9.9960e-01 lowCoverage 4.8423e-02 1.0000e+00 lowCoverage 0.12559286 6.4640e-02 lowCoverage 1.0000e+00 lowCoverage 0.825942 0.7346939 0.0594689 3 0.815357 0.7594086 0.05594866 4.0075e-02 8.5027e-01 lowCoverage 1.00000000 1.0000e+00 lowCoverage 1.0459e-01 7.5199e-01 lowCoverage 1.000000 1.0000e+00 lowCoverage 5.1500e-02 0.3528780 lowCoverage 1.00000 lowCoverage 0.7974948 0.7471264 0.07336521 3 0.794312 0.7184971 0.07581536 3.0899e-02 9.7763e-01 lowCoverage 3.3225e-01 1.0000e+00 lowCoverage 6.4169e-02 9.8799e-01 lowCoverage 8.5559e-01 1.0000e+00 lowCoverage 0.0904602 1.7324e-01 lowCoverage 1.0000e+00 lowCoverage 0.7974948 0.7346939 0.04224673 3 0.794312 0.7594086 0.0349038 1.0878e-01 7.6062e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 2.4375e-01 6.9918e-01 lowCoverage 1.000000 1.000000 lowCoverage 0.0163674 0.7772317 lowCoverage 1.00000 lowCoverage 0.7471264 0.7346939 -0.03497002 1 0.7184971 0.7594086 -0.0409115 8.4288e-01 1.6301e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.7984e-01 1.6889e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -7.4093e-02 3.2474e-01 lowCoverage 1.0000000 lowCoverage chr12 45228450 45229450 41313 SLC38A2 ENSG00000134294 0.7052318 233 5 0.4998039 177 5 0.5816201 114 5 0.6965035 175 5 0.5809524 93 5 0.5496792 271 5 0.5000934 104 5 0.7034856 140 5 0.5089040 97 5 0.7454545 93 5 0.6605333 237 5 0.4880691 68 2 0.6846066 125 5 0.6136364 61 4 0.5822833 136 5 0.7635659 54 2 0.5490196 41 2 0.7311927 166 5 0.7274949 160 5 0.699757 199 5 0.437762 49 2 0.8368056 56 2 0.5511364 165 5 0.6059524 102 4 0.6368664 79 2 0.6243221 183 5 0.7400000 65 2 0.563885 66 2 0.61446809 113 5 0.7629888 187 5 0.7155094 185 5 0.700858 313 5 0.5580180 167 5 0.57713472 106 5 0.5979473 140 5 0.58333333 23 2 0.665541 141 5 0.6761018 162 5 0.6877259 202 5 0.6640183 222 5 0.7145442 200 5 0.60602852 166 5 0.7673471 213 5 0.7602423 0.6957525 0.63027650 0.7705081 0.6707281 0.7009405 0.6509308 0.6724549 0.5832484 0.6960272 0.7136150 0.5412740 0.8139759 0.6665968 0.7260219 0.7117822 0.6185326 0.7384043 0.7199955 0.765686 0.6528019 0.7136876 0.719613 0.7480232 6.0262e-01 0.7261493 0.7025830 0.650050 0.7598571 0.7262360 0.7748417 0.8111587 0.6120938 0.5677712 0.75043100 0.55221976 0.7227201 0.7265560 0.7414847 0.7213722 0.73008910 0.7422983 0.7795739 2 0.6905977 0.7063340 -0.02411569 5 0.586833 0.628900 -0.04206682 0.99846888 2.0538e-01 insignificant 1.000000 1.0000000 insignificant 0.99239048 1.7705e-01 insignificant 1.00000 1.000000 insignificant -0.0206185 0.5886343 lowCoverage 1 lowCoverage 0.6905977 0.6441137 2.8043e-02 5 0.586833 0.5911754 -0.0043425 1.1929e-01 8.3493e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.0452e-01 7.0211e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01891498 5.2174e-01 lowCoverage 1.0000e+00 lowCoverage 0.691801 0.7337986 -0.0377615 5 0.654899 0.6974076 -0.04250820 9.8998e-01 6.5798e-02 insignificant 1.00000000 1.0000e+00 insignificant 9.9484e-01 4.9800e-02 weaklyHypometh 1.000000 1.0000e+00 insignificant -5.9338e-02 0.1116441 lowCoverage 1.00000 lowCoverage 0.7063340 0.6441137 0.05169763 5 0.628900 0.5911754 0.03772436 5.1304e-02 9.9709e-01 insignificant 5.0298e-01 1.0000e+00 insignificant 1.6809e-01 9.4444e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0395335 3.0300e-01 lowCoverage 1.0000e+00 lowCoverage 0.7071291 0.7337986 -0.01459669 5 0.680460 0.6974076 -0.0169480 8.3479e-01 3.6666e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.4698e-01 2.8370e-01 insignificant 1.000000 1.000000 insignificant -0.0387199 0.3631798 lowCoverage 1.00000 lowCoverage 0.6448980 0.7337986 -0.06895816 5 0.6276456 0.6974076 -0.0697621 9.8289e-01 9.3930e-03 weaklyHypometh 1.0000e+00 1.3419e-01 insignificant 9.6820e-01 3.4820e-02 weaklyHypometh 1.0000e+00 5.9016e-01 insignificant -7.8253e-02 4.8168e-02 lowCoverage 0.8405479 lowCoverage chr12 46417550 46418550 41372 ENSG00000111405 0.9421251 563 10 0.7334440 203 8 0.7609419 238 9 0.9587414 490 10 0.8861865 144 9 0.8485325 392 10 0.8147120 213 9 0.9088124 170 10 0.9030447 215 9 0.7758065 166 9 0.8317033 264 10 0.8189875 166 9 0.9096915 172 9 0.9107143 69 2 0.8730894 241 9 0.8291313 220 9 0.8023459 111 7 0.6852102 639 10 0.9145876 231 10 0.827035 327 10 0.804762 104 9 0.8003119 210 9 0.9298054 290 13 0.7876082 129 10 0.6679019 146 10 0.9439361 190 9 0.6513569 209 9 0.772763 112 9 0.84925510 133 9 0.8747153 276 9 0.8775881 194 9 0.938383 442 10 0.3377420 180 10 0.60079305 163 9 0.3555556 132 3 0.50056097 105 9 0.420039 198 10 0.4002203 293 10 0.9243993 485 10 0.7802410 435 10 0.8031669 480 8 0.92473784 542 8 0.8920567 475 10 0.9263332 0.8377042 0.83720714 0.9493012 0.9354875 0.9183806 0.8652634 0.8921656 0.9360924 0.8800751 0.8967340 0.8978663 0.9280852 NA 0.9265196 0.9123069 0.8068705 0.8636493 0.9528136 0.928015 0.8677778 0.7871599 0.918218 0.9503788 9.1035e-01 0.9650277 0.8683130 0.906423 0.9124597 0.9381892 0.9268441 0.9308801 0.2942667 0.4015489 0.31621787 0.36657953 0.4176136 0.2930896 0.9081875 0.8380925 0.84128355 0.9075286 0.8883738 9 0.9080482 0.9172840 -0.01471537 10 0.783114 0.773650 0.00946385 0.99741300 2.4140e-01 insignificant 1.000000 1.0000000 insignificant 0.97215465 4.0354e-01 insignificant 1.00000 1.000000 insignificant 0.0218765 0.5076770 insignificant 1 insignificant 0.9082569 0.3464052 5.5666e-01 10 0.841938 0.3342791 0.5076587 2.1293e-68 1.0000e+00 hypermethylated 2.1293e-65 1.0000e+00 hypermethylated 8.9353e-12 1.0000e+00 hypermethylated 1.7871e-09 1.0000e+00 hypermethylated 0.41092369 4.1597e-05 hypermethylated 2.4197e-03 hypermethylated 0.909827 0.8758792 0.0374559 10 0.859763 0.8025782 0.05718432 8.9020e-06 9.2825e-01 weaklyHypermeth 0.00148366 1.0000e+00 weaklyHypermeth 2.0322e-03 8.8220e-01 weaklyHypermeth 0.382442 1.0000e+00 insignificant -1.8178e-02 0.6179018 insignificant 1.00000 insignificant 0.9176277 0.3467290 0.55799209 10 0.790754 0.3551716 0.43558204 2.0437e-40 1.0000e+00 hypermethylated 2.0437e-37 1.0000e+00 hypermethylated 3.1860e-10 9.9999e-01 hypermethylated 7.9649e-08 1.0000e+00 hypermethylated 0.3890472 1.3574e-05 hypermethylated 1.1827e-03 hypermethylated 0.9216590 0.8758792 0.04776060 10 0.885967 0.8025782 0.0833891 9.0126e-05 9.9394e-01 weaklyHypermeth 1.1266e-02 1.0000e+00 weaklyHypermeth 2.1501e-03 9.9530e-01 weaklyHypermeth 0.238896 1.000000 insignificant -0.0400547 0.3564627 insignificant 1.00000 insignificant 0.3493862 0.8758792 -0.48191533 10 0.4711587 0.8025782 -0.3314196 9.9918e-01 7.1882e-22 hypomethylated 1.0000e+00 3.5941e-19 hypomethylated 9.9949e-01 1.6832e-06 hypomethylated 1.0000e+00 2.8623e-04 hypomethylated -4.2910e-01 1.6538e-05 hypomethylated 0.0041346 hypomethylated chr12 46492450 46493450 41381 HDAC7 ENSG00000061273 0.0286796 1110 18 0.0288219 652 20 0.0202193 779 20 0.0246687 831 17 0.0139048 389 20 0.0842305 936 18 0.0259994 751 20 0.0119967 578 20 0.0209867 782 18 0.0259887 662 18 0.0369672 795 20 0.0276097 685 18 0.0146875 566 18 0.0000000 55 2 0.0273082 725 18 0.0230942 549 18 0.0206357 712 17 0.0220694 826 18 0.0228487 517 18 0.079313 941 18 0.013382 325 20 0.0102058 517 18 0.0268838 797 20 0.0110252 407 20 0.0114022 367 13 0.0108487 705 20 0.0193275 500 20 0.062696 272 17 0.11968644 523 18 0.0585078 735 20 0.0120827 616 20 0.025684 1275 20 0.0107292 546 20 0.00500184 605 18 0.0000000 195 9 0.00000000 307 17 0.051687 278 18 0.0033838 688 20 0.0336836 1171 18 0.0454354 1079 18 0.0615706 764 18 0.03788343 1320 18 0.0393922 1112 18 0.0285042 0.0295386 0.01880367 0.0291110 0.0088088 0.0445758 0.0346323 0.0162458 0.0277809 0.0318442 0.0459106 0.0353274 0.0189811 NA 0.0373021 0.0249016 0.0257884 0.0276017 0.0278124 0.034094 0.0152446 0.0148408 0.027038 0.0139358 1.3542e-02 0.0122642 0.0279599 0.030681 0.0212621 0.0124813 0.0183200 0.0343576 0.0100395 0.0059674 0.00460365 0.00000000 0.0133290 0.0046830 0.0425215 0.0598197 0.02396012 0.0294449 0.0474543 17 0.0278159 0.0210317 0.00845703 18 0.047842 0.056142 -0.00829982 0.00441846 9.9682e-01 weaklyHypermeth 1.000000 1.0000000 insignificant 0.00298262 9.6940e-01 weaklyHypermeth 0.99421 1.000000 insignificant -0.0038096 0.7230137 insignificant 1 insignificant 0.0277597 0.0053476 2.1740e-02 18 0.046791 0.0043182 0.0424724 1.5685e-09 1.0000e+00 weaklyHypermeth 4.9017e-08 1.0000e+00 weaklyHypermeth 9.0377e-08 1.0000e+00 weaklyHypermeth 6.4555e-06 1.0000e+00 weaklyHypermeth 0.01620111 1.1788e-01 insignificant 1.0000e+00 insignificant 0.027818 0.0409550 -0.0093552 18 0.049836 0.0434842 0.00635164 7.3670e-01 7.4992e-04 weaklyHypometh 1.00000000 1.0713e-01 insignificant 9.3750e-01 2.8639e-02 weaklyHypometh 1.000000 1.0000e+00 insignificant -1.5592e-02 0.0364343 weaklyHypometh 1.00000 insignificant 0.0210437 0.0057274 0.01411695 20 0.061024 0.0476087 0.01341538 1.7243e-03 9.9996e-01 weaklyHypermeth 2.6907e-02 1.0000e+00 weaklyHypermeth 6.0697e-03 1.0000e+00 weaklyHypermeth 1.2139e-01 1.0000e+00 insignificant 0.0200107 1.3182e-01 insignificant 1.0000e+00 insignificant 0.0210377 0.0409475 -0.01818595 18 0.056142 0.0417448 0.0143974 9.6639e-01 1.3861e-04 weaklyHypometh 1.0000e+00 4.6202e-02 weaklyHypometh 9.9852e-01 1.1440e-03 weaklyHypometh 1.000000 0.381321 insignificant -0.0117820 0.2902409 insignificant 1.00000 insignificant 0.0053476 0.0409701 -0.03121827 18 0.0043182 0.0474373 -0.0431190 1.0000e+00 3.9123e-10 weaklyHypometh 1.0000e+00 2.6082e-08 weaklyHypometh 1.0000e+00 9.7673e-06 weaklyHypometh 1.0000e+00 9.7673e-04 weaklyHypometh -3.1793e-02 1.0155e-02 weaklyHypometh 0.2986703 insignificant chr12 46681250 46682250 41390 TMEM106C ENSG00000134291 0.0034434 717 15 0.0060004 496 15 0.0099349 503 15 0.0103871 672 13 0.0096903 371 15 0.0891255 930 15 0.0069771 489 15 0.0063224 521 15 0.0063231 660 15 0.0075675 641 15 0.0093800 582 15 0.0746154 519 15 0.0656851 518 15 0.0000000 131 8 0.0121832 639 15 0.0000000 259 15 0.0073504 358 15 0.0066530 669 13 0.0055556 344 15 0.019702 751 15 0.048214 215 15 0.0604471 505 13 0.0416828 567 15 0.0032051 285 14 0.0071970 358 13 0.0114994 678 15 0.0095312 402 15 0.011024 271 15 0.06439394 431 13 0.0037566 669 15 0.0000000 619 15 0.016356 922 15 0.0021505 497 15 0.00607211 256 13 0.0041322 411 11 0.00000000 215 13 0.013153 284 15 0.0016946 553 15 0.0054471 994 15 0.0021505 737 15 0.0013021 723 15 0.00458477 850 15 0.0218831 820 15 0.0046254 0.0068288 0.01264317 0.0113103 0.0102469 0.0376485 0.0046338 0.0073918 0.0049507 0.0051932 0.0071914 0.0106234 0.0041247 0.0068614 0.0096467 0.0000000 0.0049824 0.0091884 0.0011282 0.018437 0.0387313 0.0172213 0.033074 0.0060631 5.0562e-03 0.0059505 0.0093153 0.016325 0.0110765 0.0026904 0.0000000 0.0127657 0.0013392 0.0072647 0.00505542 0.00000000 0.0103668 0.0035424 0.0086773 0.0038139 0.00246315 0.0082159 0.0180976 13 0.0117920 0.0119892 -0.00019733 15 0.042674 0.019702 0.02297136 0.60797662 6.7097e-01 insignificant 1.000000 1.0000000 insignificant 0.85748877 1.9198e-01 insignificant 1.00000 1.000000 insignificant -0.0052641 0.5616131 insignificant 1 insignificant 0.0114291 0.0040614 7.8318e-03 15 0.012185 0.0045025 0.0076826 1.4728e-02 9.5120e-01 weaklyHypermeth 1.6009e-01 1.0000e+00 insignificant 3.4956e-02 8.8053e-01 weaklyHypermeth 4.9937e-01 1.0000e+00 insignificant 0.01331112 3.9942e-02 weaklyHypermeth 7.2622e-01 insignificant 0.011792 0.0063046 0.0034957 15 0.042674 0.0057635 0.03691007 1.3535e-01 9.6834e-01 insignificant 1.00000000 1.0000e+00 insignificant 3.6522e-01 9.6654e-01 insignificant 1.000000 1.0000e+00 insignificant 1.0771e-02 0.1344571 insignificant 1.00000 insignificant 0.0118423 0.0040614 0.00790989 15 0.014955 0.0045025 0.01045255 5.2683e-02 9.8328e-01 insignificant 5.1149e-01 1.0000e+00 insignificant 3.4181e-02 9.9393e-01 weaklyHypermeth 5.1789e-01 1.0000e+00 insignificant 0.0185752 2.1560e-02 weaklyHypermeth 4.6869e-01 insignificant 0.0119892 0.0063046 0.00322800 15 0.019702 0.0057635 0.0139387 1.8916e-01 8.4149e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.4001e-01 9.6231e-01 insignificant 1.000000 1.000000 insignificant 0.0160355 0.0576945 insignificant 1.00000 insignificant 0.0040614 0.0063061 -0.00434265 15 0.0045025 0.0061477 -0.0016452 9.9528e-01 3.5509e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9764e-01 7.0211e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -2.5398e-03 5.7113e-01 insignificant 1.0000000 insignificant chr12 47769250 47770250 41401 RHEBL1 ENSG00000167550 0.0366999 1264 15 0.1180284 418 15 0.0768389 304 15 0.0473498 1059 15 0.0438172 461 15 0.2687467 865 15 0.0321223 647 15 0.0331822 382 15 0.0550659 383 15 0.0853604 363 15 0.1116703 562 15 0.0615173 185 15 0.0776785 290 15 0.1565592 252 12 0.0409210 444 15 0.0361111 194 12 NA 0 0 0.0553346 3088 15 0.0296898 844 15 0.030494 914 15 0.086386 215 15 0.0252041 551 15 0.1349808 279 15 0.0544007 211 15 0.1786835 2086 15 0.0267335 607 15 0.1420196 493 15 0.029517 293 12 0.03949568 739 15 0.0161751 651 15 0.0070485 646 15 0.045554 804 15 0.0000000 358 15 0.00304274 602 15 0.0020790 484 12 0.00000000 315 15 0.054664 416 15 0.0396334 777 15 0.0204707 1097 15 0.0229428 1002 15 0.0298579 762 15 0.02067278 1647 15 0.0694433 699 15 0.0407572 0.0333287 0.08515535 0.0567315 0.0414201 0.1324667 0.0427189 0.0486130 0.0495043 0.0641740 0.0603802 0.0833669 0.0250655 0.0543951 0.0385858 0.0403615 NA 0.0332347 0.0373852 0.039288 0.1351102 0.0248302 0.096368 0.0317815 3.6629e-02 0.0340945 0.0317979 0.051364 0.0464992 0.0224212 0.0111934 0.0541804 0.0000000 0.0033070 0.00361604 0.00000000 0.0079846 0.0181765 0.0258274 0.0241087 0.04036028 0.0236161 0.0088982 12 0.0487257 0.0401532 0.01053040 15 0.179602 0.118022 0.06157984 0.36940655 9.9419e-01 insignificant 1.000000 1.0000000 insignificant 0.30164532 9.9989e-01 insignificant 1.00000 1.000000 insignificant 0.0080196 0.7084624 insignificant 1 insignificant 0.0483133 0.0108475 3.8392e-02 15 0.114873 0.0618755 0.0529977 1.4765e-07 9.9989e-01 weaklyHypermeth 3.5154e-06 1.0000e+00 weaklyHypermeth 1.6710e-09 1.0000e+00 weaklyHypermeth 1.6710e-07 1.0000e+00 weaklyHypermeth 0.05696626 2.6373e-03 weaklyHypermeth 8.0979e-02 weaklyHypermeth 0.048395 0.0213175 0.0261902 15 0.089537 0.0819983 0.00753858 9.2003e-04 9.9706e-01 weaklyHypermeth 0.07666912 1.0000e+00 weaklyHypermeth 7.7832e-04 9.9166e-01 weaklyHypermeth 0.259440 1.0000e+00 insignificant 4.0859e-02 0.0218602 weaklyHypermeth 1.00000 insignificant 0.0394441 0.0108438 0.02776084 15 0.044330 0.0587817 -0.01445167 2.6797e-03 9.9997e-01 weaklyHypermeth 4.0601e-02 1.0000e+00 weaklyHypermeth 1.1533e-04 1.0000e+00 weaklyHypermeth 3.8445e-03 1.0000e+00 weaklyHypermeth 0.0489466 2.1105e-02 weaklyHypermeth 4.6869e-01 insignificant 0.0393586 0.0211295 0.01701403 15 0.036885 0.0207982 0.0160863 4.3855e-02 9.9374e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 1.8694e-01 9.1390e-01 insignificant 1.000000 1.000000 insignificant 0.0328390 0.1020893 insignificant 1.00000 insignificant 0.0105263 0.0211295 -0.01046863 15 0.0117090 0.0207982 -0.0090892 9.4731e-01 1.0761e-05 weaklyHypometh 1.0000e+00 2.8319e-04 weaklyHypometh 9.9934e-01 1.1017e-04 weaklyHypometh 1.0000e+00 5.7985e-03 weaklyHypometh -1.6108e-02 2.6660e-01 insignificant 1.0000000 insignificant chr12 47958050 47959050 41414 TUBA1C ENSG00000167553 0.8700295 216 10 0.8969251 79 8 0.7871693 59 6 0.8708001 245 10 0.8385417 29 2 0.8629363 339 10 0.8154762 35 4 0.7625803 78 5 0.7398810 34 4 0.5808081 36 3 0.8093985 138 11 0.9772727 29 1 0.8292700 121 6 NA 0 0 0.9332096 85 7 0.4545455 13 0 0.9740260 34 3 0.8324391 300 10 0.8132900 79 10 0.790605 239 11 0.932143 45 5 0.7875325 139 10 0.8582300 156 11 0.9642857 30 3 0.8627706 78 6 0.7666413 180 10 0.9047619 38 4 0.551020 25 3 0.85029762 54 6 0.8714708 159 10 0.8681394 148 8 0.862467 384 11 0.8299811 110 7 0.69802303 101 7 0.8518796 195 11 0.74666667 37 4 0.877952 66 6 0.7637371 212 10 0.8736893 220 11 0.9008784 255 10 0.9057911 277 10 0.87967714 157 10 0.7995238 220 10 0.8535988 0.9625179 0.84355401 0.8857510 0.8455285 0.8676161 0.8307927 0.8806972 0.6538045 0.8319783 0.8525770 0.9695122 0.9679047 NA 0.9208109 0.8780488 1.0000000 0.8849919 0.9078450 0.887995 0.9225610 0.8370499 0.907788 0.9390244 8.7689e-01 0.8304852 0.8658537 0.648084 0.8347851 0.8801338 0.9800443 0.8405152 0.9340853 0.8910550 0.88248499 0.87195122 0.8567865 0.8110183 0.9569399 0.9132686 0.92786005 0.9329246 0.8788850 1 0.8572736 0.8578397 -0.00560103 10 0.832513 0.849659 -0.01714628 0.77705852 4.9508e-01 insignificant 1.000000 1.0000000 insignificant 0.63090957 8.0180e-01 insignificant 1.00000 1.000000 insignificant -0.0273904 0.5170986 insignificant 1 insignificant 0.8572736 0.8210818 3.1131e-02 10 0.832513 0.8036068 0.0289058 2.4711e-02 9.6432e-01 weaklyHypermeth 2.4960e-01 1.0000e+00 insignificant 1.1842e-01 9.7604e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01788318 6.6187e-01 insignificant 1.0000e+00 insignificant 0.857404 0.8866253 -0.0321977 10 0.846470 0.8861318 -0.03966193 9.9829e-01 1.0803e-01 insignificant 1.00000000 1.0000e+00 insignificant 9.2106e-01 5.2543e-01 insignificant 1.000000 1.0000e+00 insignificant -5.9322e-02 0.0987312 insignificant 1.00000 insignificant 0.8578397 0.8210818 0.04289364 10 0.849659 0.8036068 0.04605203 5.8032e-02 9.9314e-01 insignificant 5.5496e-01 1.0000e+00 insignificant 1.9930e-01 9.8745e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0452735 2.9468e-01 insignificant 1.0000e+00 insignificant 0.8578397 0.8865248 -0.02318414 10 0.849659 0.8757801 -0.0261213 9.2798e-01 1.8016e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.2124e-01 4.1593e-01 insignificant 1.000000 1.000000 insignificant -0.0319319 0.3891810 insignificant 1.00000 insignificant 0.8210818 0.8865248 -0.06641052 10 0.8036068 0.8757801 -0.0721733 9.9999e-01 2.2059e-03 weaklyHypometh 1.0000e+00 3.8033e-02 weaklyHypometh 9.9944e-01 1.0670e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -7.7205e-02 5.2124e-02 insignificant 0.8405479 insignificant chr12 47976350 47977350 41416 PRPH ENSG00000135406 0.0614640 1540 21 0.1614686 1204 21 0.1151783 1078 21 0.1542825 1494 21 0.0933083 903 21 0.1726114 1920 21 0.1680494 909 21 0.1221077 949 21 0.0928843 1583 22 0.1127249 1788 20 0.1512794 977 21 0.0894562 1066 20 0.0724363 1330 21 0.1072390 1200 20 0.1570002 1770 20 0.1292414 894 20 0.1259445 268 17 0.1249181 2080 21 0.1176746 1171 21 0.101494 1383 21 0.115709 398 23 0.0961372 880 20 0.2003672 823 21 0.0667247 871 23 0.0939704 615 20 0.1336535 1590 21 0.0675647 1248 22 0.053370 864 23 0.17474655 1124 21 0.0984675 1558 21 0.0887398 1323 21 0.145141 1260 21 0.1111988 789 21 0.04046454 884 21 0.0684088 459 14 0.03199999 222 17 0.113824 968 22 0.0421325 1233 21 0.1960238 1525 21 0.2081638 1445 21 0.1488721 1416 21 0.13611800 1762 20 0.1631644 1314 21 0.0733627 0.1002362 0.08465212 0.0994486 0.1150936 0.1593661 0.1355285 0.1022571 0.1164893 0.1063993 0.1208986 0.1056366 0.0848188 0.1375500 0.1161044 0.1525283 0.1037680 0.1042641 0.1335624 0.085474 0.1888700 0.0689224 0.117851 0.1043227 1.2803e-01 0.1069755 0.0706550 0.090860 0.1072188 0.1133477 0.0449105 0.1626387 0.0872137 0.0436370 0.06187532 0.07951101 0.0531116 0.0476955 0.0914387 0.0989012 0.08384641 0.1102947 0.1105527 20 0.1291170 0.1187116 0.00917713 21 0.134083 0.114339 0.01974442 0.41780193 9.9550e-01 insignificant 1.000000 1.0000000 insignificant 0.53507137 9.9933e-01 insignificant 1.00000 1.000000 insignificant 0.0103222 0.4930879 insignificant 1 insignificant 0.1292069 0.0795430 5.7035e-02 21 0.185295 0.1225043 0.0627902 1.8642e-13 1.0000e+00 weaklyHypermeth 8.4736e-12 1.0000e+00 weaklyHypermeth 6.2589e-11 1.0000e+00 weaklyHypermeth 8.9413e-09 1.0000e+00 weaklyHypermeth 0.05353340 1.3210e-02 weaklyHypermeth 2.9355e-01 insignificant 0.129085 0.1480836 0.0143898 21 0.128887 0.2521274 -0.12324044 2.8206e-01 7.8082e-01 insignificant 1.00000000 1.0000e+00 insignificant 3.1812e-01 6.8952e-01 insignificant 1.000000 1.0000e+00 insignificant -4.8930e-02 0.0181161 weaklyHypometh 1.00000 insignificant 0.1187495 0.0795080 0.04819860 21 0.105860 0.1148478 -0.00898761 3.9642e-07 1.0000e+00 weaklyHypermeth 1.0714e-05 1.0000e+00 weaklyHypermeth 2.7588e-06 1.0000e+00 weaklyHypermeth 1.7243e-04 1.0000e+00 weaklyHypermeth 0.0432112 4.8897e-02 weaklyHypermeth 8.0410e-01 insignificant 0.1187455 0.1481035 0.00459352 21 0.106945 0.2614655 -0.1545201 7.7417e-01 4.6978e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.2148e-01 3.9360e-01 insignificant 1.000000 1.000000 insignificant -0.0592525 0.0093303 weaklyHypometh 1.00000 insignificant 0.0791905 0.1479893 -0.04400900 21 0.0644280 0.2330603 -0.1686323 9.9999e-01 1.4523e-09 weaklyHypometh 1.0000e+00 8.7583e-08 weaklyHypometh 1.0000e+00 9.0830e-06 weaklyHypometh 1.0000e+00 9.7673e-04 weaklyHypometh -1.0246e-01 6.9195e-04 weaklyHypometh 0.0494248 weaklyHypometh chr12 48301450 48302450 41423 FAM186B ENSG00000135436 0.3481221 505 9 0.3752841 161 9 0.3637822 161 10 0.3437118 114 8 0.2321742 104 8 0.6400111 387 8 0.2728365 140 10 0.4104951 115 6 0.2836712 135 6 0.3941919 114 7 0.4347298 168 6 0.3472045 126 8 0.4956644 131 4 0.2768398 47 6 0.2894257 185 6 0.4209596 85 6 0.1513413 104 4 0.1698939 120 7 0.2073814 258 7 0.642915 277 5 0.385492 100 10 0.3100000 78 5 0.2943956 204 10 0.3200553 75 5 0.5690476 33 3 0.3526973 88 4 0.2955025 122 8 0.181962 62 4 0.30460091 117 6 0.3845623 93 5 0.2220262 142 8 0.329129 315 9 0.0688776 163 10 0.06015806 149 5 0.1766809 129 5 0.14000000 44 5 0.118888 105 7 0.1105372 163 7 0.2309416 568 9 0.2426468 1441 10 0.3635943 172 8 0.56932003 511 9 0.3650419 157 9 0.5102505 0.3145642 0.41837013 0.5417718 0.4272042 0.6160366 0.3834854 0.4324146 0.4960077 0.5792866 0.5868756 0.4414325 0.6080066 0.4072203 0.4272121 0.4642186 0.3679317 0.5494928 0.3444125 0.623824 0.4758592 0.4195316 0.460283 0.4948069 5.4586e-01 0.5760193 0.4084699 0.478399 0.4643922 0.5748261 0.3547044 0.5291893 0.2568062 0.1863166 0.34176852 0.23669271 0.4581868 0.2396144 0.4856052 0.4629530 0.59642532 0.4348598 0.4527574 3 0.4254948 0.4120533 0.01710612 8 0.307461 0.219503 0.08795731 0.10109501 9.9544e-01 insignificant 1.000000 1.0000000 insignificant 0.20261033 9.8891e-01 insignificant 1.00000 1.000000 insignificant 0.0259091 0.5280412 insignificant 1 insignificant 0.4263634 0.2045153 2.3520e-01 6 0.348456 0.0815092 0.2669463 2.1657e-13 1.0000e+00 hypermethylated 9.4162e-12 1.0000e+00 hypermethylated 1.6310e-11 1.0000e+00 hypermethylated 2.7183e-09 1.0000e+00 hypermethylated 0.24250811 3.4347e-07 hypermethylated 4.2934e-05 hypermethylated 0.425495 0.3196347 -0.0025542 8 0.307461 0.3721620 -0.06470117 7.6803e-01 4.5087e-01 insignificant 1.00000000 1.0000e+00 insignificant 7.7354e-01 5.4811e-01 insignificant 1.000000 1.0000e+00 insignificant 7.2286e-04 0.9918272 insignificant 1.00000 insignificant 0.4135021 0.2045153 0.20210283 6 0.248771 0.0815092 0.16726139 8.5681e-08 1.0000e+00 hypermethylated 2.7639e-06 1.0000e+00 hypermethylated 9.8244e-07 1.0000e+00 hypermethylated 8.1870e-05 1.0000e+00 hypermethylated 0.2165990 6.3615e-06 hypermethylated 6.3615e-04 hypermethylated 0.4121763 0.3194103 -0.02293359 7 0.235087 0.3514863 -0.1163997 9.8871e-01 1.4299e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8302e-01 4.0971e-01 insignificant 1.000000 1.000000 insignificant -0.0251863 0.7199444 insignificant 1.00000 insignificant 0.2045153 0.3195079 -0.23133862 6 0.0815092 0.3551169 -0.2736077 1.0000e+00 1.8370e-11 hypomethylated 1.0000e+00 2.2962e-09 hypomethylated 1.0000e+00 1.1862e-07 hypomethylated 1.0000e+00 5.9309e-05 hypomethylated -2.4179e-01 1.4078e-02 weaklyHypometh 0.3556818 insignificant chr12 49221950 49222950 41462 DIP2B ENSG00000066084 0.8321449 326 10 0.6054065 300 10 0.7468656 197 10 0.7870581 324 10 0.7933480 233 10 0.7578580 287 10 0.7771038 195 9 0.7289553 249 10 0.6690951 208 10 0.7708754 174 10 0.7864646 432 10 0.8330368 131 6 0.8421192 217 10 0.7553718 113 10 0.8064634 246 10 0.7973085 98 6 0.7744909 600 6 0.7349536 302 10 0.7979731 208 10 0.695239 239 7 0.822398 90 6 0.8782064 136 7 0.8365963 206 10 0.8106251 127 7 0.8299567 147 10 0.7583623 413 10 0.7009942 124 7 0.700159 95 7 0.80698400 241 10 0.8023360 261 10 0.7050339 330 10 0.684587 277 10 0.7324901 243 9 0.64036101 232 10 0.7342811 283 10 0.79413087 78 5 0.648947 165 7 0.7106628 288 10 0.7924337 329 10 0.8311368 326 10 0.7563034 352 10 0.77429853 227 10 0.8612598 269 10 0.8519877 0.6372629 0.75489897 0.7841301 0.7858127 0.8022673 0.7858211 0.6910770 0.7486134 0.7612904 0.7884699 0.7722073 0.8051511 0.7980178 0.8045633 0.7742123 0.7807421 0.7368955 0.7887067 0.796535 0.7641988 0.8146578 0.858363 0.8165890 8.0159e-01 0.7963306 0.7502693 0.749179 0.8125747 0.8235544 0.7380140 0.7380576 0.6834827 0.6552483 0.74704065 0.74861162 0.6969331 0.6998676 0.8175814 0.8227610 0.76249627 0.7999893 0.8647791 7 0.7670801 0.7944422 -0.01045706 10 0.793497 0.772247 0.02125045 0.64420785 2.5310e-01 insignificant 1.000000 1.0000000 insignificant 0.78134925 7.4217e-02 insignificant 1.00000 1.000000 insignificant -0.0134132 0.5636987 insignificant 1 insignificant 0.7668179 0.7020946 6.5694e-02 10 0.766482 0.7056856 0.0607968 1.2422e-08 9.9094e-01 weaklyHypermeth 3.3573e-07 1.0000e+00 weaklyHypermeth 4.4587e-05 9.7135e-01 weaklyHypermeth 1.4383e-03 1.0000e+00 weaklyHypermeth 0.05446103 7.6687e-02 insignificant 1.0000e+00 insignificant 0.766818 0.8316700 -0.0383078 10 0.766482 0.8066642 -0.04018174 9.9955e-01 2.1275e-03 weaklyHypometh 1.00000000 2.1275e-01 insignificant 9.9835e-01 8.7721e-03 weaklyHypometh 1.000000 8.7721e-01 insignificant -3.8480e-02 0.1330441 insignificant 1.00000 insignificant 0.7945879 0.7020946 0.07678511 10 0.766696 0.7056856 0.06101057 5.7258e-07 9.9427e-01 weaklyHypermeth 1.5068e-05 1.0000e+00 weaklyHypermeth 9.0199e-05 9.9920e-01 weaklyHypermeth 3.1103e-03 1.0000e+00 weaklyHypermeth 0.0678743 4.5722e-02 weaklyHypermeth 8.0410e-01 insignificant 0.7945879 0.8316700 -0.02882722 10 0.766696 0.8066642 -0.0399680 9.9729e-01 3.5971e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.0404e-01 2.4727e-01 insignificant 1.000000 1.000000 insignificant -0.0250666 0.3697770 insignificant 1.00000 insignificant 0.7020946 0.8316700 -0.10567447 10 0.7056856 0.8066642 -0.1009786 9.9999e-01 1.0052e-07 weaklyHypometh 1.0000e+00 3.8661e-06 weaklyHypometh 9.9977e-01 3.9034e-05 weaklyHypometh 1.0000e+00 2.4396e-03 weaklyHypometh -9.2941e-02 1.3759e-02 weaklyHypometh 0.3556818 insignificant chr12 49289950 49290950 41471 DIP2B ENSG00000066084 0.5881335 143 6 0.6511632 93 6 0.5787037 65 6 0.5301910 97 6 0.4935897 54 6 0.6409888 185 6 0.5211344 57 5 0.5152579 54 5 0.4986111 63 5 0.5433201 56 5 0.5097278 141 6 0.5370370 47 5 0.6111111 52 4 NA 0 0 0.5820615 83 5 0.5619048 47 6 0.4652778 50 4 0.7341724 101 4 0.6158619 83 6 0.618043 201 6 0.733333 25 3 0.6111111 61 5 0.6962711 150 6 0.6115385 46 4 0.7428571 29 4 0.6302350 78 6 0.6977778 48 5 0.555556 31 3 0.60052910 54 6 0.5680708 131 6 0.6403319 124 6 0.673776 227 6 0.6843823 43 4 0.55787037 67 6 0.5375000 76 6 0.70952381 43 3 0.627752 79 6 0.6075036 106 6 0.6879108 188 6 0.6095284 169 6 0.5823413 112 6 0.64247275 149 6 0.6781136 134 6 0.6127929 0.6439175 0.63641874 0.5859813 0.5463721 0.6357494 0.5272529 0.5312973 0.5339835 0.5541906 0.5333984 0.5697400 0.6371158 NA 0.5893539 0.5952381 0.4982270 0.7446484 0.5892264 0.617917 0.7234043 0.5975177 0.718191 0.6115657 7.4472e-01 0.6412049 0.7128620 0.624113 0.6095914 0.6139688 0.6626293 0.6549944 0.6222710 0.6037234 0.62234043 0.67426545 0.6491594 0.6406926 0.7138171 0.6428011 0.64074637 0.6596712 0.6963539 2 0.5771531 0.6434263 -0.05986809 6 0.576520 0.637652 -0.06113263 0.99976470 5.9011e-04 weaklyHypometh 1.000000 0.1967044 insignificant 0.99922253 1.0933e-03 weaklyHypometh 1.00000 0.364424 insignificant -0.0785564 0.0025961 weaklyHypometh 1 insignificant 0.5771531 0.6280193 -4.1156e-02 6 0.576520 0.6048553 -0.0283355 3.4076e-01 8.8597e-03 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 4.1345e-01 7.8373e-03 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.05252948 1.3409e-01 insignificant 1.0000e+00 insignificant 0.577153 0.6223404 -0.0769609 6 0.576520 0.6495797 -0.07305982 9.8997e-01 2.3190e-05 weaklyHypometh 1.00000000 1.1595e-02 weaklyHypometh 9.7275e-01 3.3252e-04 weaklyHypometh 1.000000 1.6206e-01 insignificant -7.1848e-02 0.0183114 weaklyHypometh 1.00000 insignificant 0.6434263 0.6280193 0.01967975 6 0.637652 0.6048553 0.03279718 8.1185e-02 5.6226e-01 insignificant 7.3805e-01 1.0000e+00 insignificant 7.1252e-02 6.2079e-01 insignificant 9.2536e-01 1.0000e+00 insignificant 0.0260269 4.4938e-01 insignificant 1.0000e+00 insignificant 0.6434263 0.6223404 -0.02005263 6 0.637652 0.6495797 -0.0119272 8.6956e-01 1.3265e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.9496e-01 5.0031e-01 insignificant 1.000000 1.000000 insignificant 0.0067089 0.8071983 insignificant 1.00000 insignificant 0.6280193 0.6223404 -0.04168109 6 0.6048553 0.6495797 -0.0447244 9.4737e-01 3.9095e-02 weaklyHypometh 1.0000e+00 4.4426e-01 insignificant 8.6786e-01 3.5646e-02 weaklyHypometh 1.0000e+00 5.9122e-01 insignificant -1.9318e-02 5.8633e-01 insignificant 1.0000000 insignificant chr12 50831950 50832950 41523 ENSG00000214487 0.2369548 412 19 0.1673756 628 19 0.2668335 627 20 0.1349983 513 13 0.3994402 413 18 0.2099666 689 14 0.2657208 704 20 0.2745843 622 20 0.1588164 1028 20 0.2143774 877 20 0.2139017 446 19 0.1824095 771 20 0.5711428 713 20 0.3556742 279 11 0.5071195 876 19 0.1447424 619 20 0.1421274 771 19 0.1549817 533 19 0.3087613 523 18 0.198196 456 13 0.597291 128 14 0.1195630 316 12 0.1001622 291 20 0.2512674 213 19 0.4429856 202 13 0.3744442 746 20 0.4114884 213 13 0.498219 178 11 0.42938833 520 18 0.1117612 819 19 0.4548505 473 19 0.522919 292 15 0.0185359 649 20 0.05748393 554 19 0.0681731 283 15 0.07023810 119 10 0.160293 253 21 0.0235771 645 19 0.1996337 566 12 0.1496489 589 12 0.4521844 362 11 0.12365545 525 19 0.1093342 436 19 0.2488573 0.1132183 0.25331780 0.1534179 0.3629198 0.0788138 0.1902479 0.2725082 0.1271203 0.1888555 0.1662877 0.1585150 0.5825352 0.4042065 0.5191055 0.0910536 0.1082897 0.0990034 0.2817452 0.125142 0.4407043 0.1009869 0.082474 0.2228176 4.4188e-01 0.4219729 0.4069541 0.594861 0.4477676 0.0673388 0.4824973 0.5620176 0.0151923 0.0216822 0.03907836 0.03546627 0.0700381 0.0274571 0.2416990 0.1476179 0.47068038 0.1438252 0.0847112 10 0.2348000 0.3272603 -0.09267040 19 0.299531 0.344683 -0.04515193 0.99530869 1.3534e-06 weaklyHypometh 1.000000 0.0013534 weaklyHypometh 0.99996207 1.6087e-04 weaklyHypometh 1.00000 0.080434 weaklyHypometh -0.1041221 0.0821025 insignificant 1 insignificant 0.2348000 0.0259688 2.1050e-01 19 0.299531 0.1524508 0.1470805 7.5308e-23 1.0000e+00 hypermethylated 8.3676e-21 1.0000e+00 hypermethylated 4.5194e-26 1.0000e+00 hypermethylated 4.5194e-23 1.0000e+00 hypermethylated 0.18902271 1.8340e-05 weaklyHypermeth 1.3100e-03 weaklyHypermeth 0.234460 0.1957224 0.0161671 12 0.295306 0.1729267 0.12237927 6.4559e-04 9.9025e-01 weaklyHypermeth 0.05868992 1.0000e+00 weaklyHypermeth 1.0164e-02 9.9722e-01 weaklyHypermeth 0.781884 1.0000e+00 insignificant 4.8515e-02 0.5089987 insignificant 1.00000 insignificant 0.3272603 0.0259688 0.29523096 19 0.344683 0.1524508 0.19223242 4.3984e-23 1.0000e+00 hypermethylated 7.3307e-21 1.0000e+00 hypermethylated 2.3015e-18 1.0000e+00 hypermethylated 2.3015e-15 1.0000e+00 hypermethylated 0.2931449 8.0019e-05 hypermethylated 5.3346e-03 hypermethylated 0.3269231 0.1957224 0.13038507 12 0.341340 0.1729267 0.1684133 8.6194e-07 1.0000e+00 weaklyHypermeth 2.1548e-04 1.0000e+00 weaklyHypermeth 8.1314e-05 1.0000e+00 weaklyHypermeth 0.020951 1.000000 weaklyHypermeth 0.1526370 0.0892904 insignificant 1.00000 insignificant 0.0252101 0.1957224 -0.16340006 12 0.1090071 0.1729267 -0.0639196 9.9361e-01 8.1191e-11 weaklyHypometh 1.0000e+00 7.3810e-09 weaklyHypometh 9.9995e-01 4.2663e-09 weaklyHypometh 1.0000e+00 4.2663e-06 weaklyHypometh -1.4051e-01 9.0022e-02 insignificant 1.0000000 insignificant chr12 50855950 50856950 41526 ENSG00000214487 0.8924522 355 9 0.5998531 558 9 0.5103440 92 7 0.8908988 225 8 0.7804762 79 6 0.8629290 421 9 0.6544974 62 5 0.7894418 246 8 0.7847985 78 8 0.6969697 49 7 0.9134042 511 9 0.4944444 26 1 0.7579282 146 7 0.7401709 75 9 0.6720238 80 6 0.6523810 18 2 0.6666667 3 0 0.8479971 378 7 0.9205715 802 8 0.905874 367 6 0.864523 185 5 1.0000000 5 0 0.8115622 124 9 0.9027778 112 7 0.8240741 24 2 0.8381571 549 8 0.8687500 75 5 0.787500 25 3 0.73308592 729 9 0.7541949 563 8 0.8967641 654 8 0.834068 355 9 0.6876984 236 9 0.77826126 245 8 0.6062232 213 6 0.70833333 10 0 0.656494 205 9 0.9043081 667 9 0.7278595 148 9 0.8306485 360 9 0.7697642 206 9 0.78846963 259 7 0.8327677 180 9 0.8950300 0.7804645 0.69681050 0.8962182 0.8109422 0.8291274 0.5908815 0.6883161 0.7339256 0.8156028 0.9114196 0.7009456 0.7989435 0.8493726 0.7457953 0.7222110 0.7161725 0.8019468 0.9241583 0.889288 0.7857365 0.9033537 0.752923 0.8430851 8.4752e-01 0.7952499 0.8313024 0.855577 0.8345305 0.8872805 0.8857502 0.8398366 0.5967325 0.7659119 0.65702124 0.68245168 0.6355749 0.8914505 0.7450350 0.8435390 0.75281412 0.7848962 0.8360210 0 0.8897397 0.9170588 -0.01905635 8 0.601732 0.717314 -0.11558112 0.97356158 2.3541e-01 insignificant 1.000000 1.0000000 insignificant 0.97413058 3.3235e-02 weaklyHypometh 1.00000 1.000000 insignificant -0.0912487 0.0164362 weaklyHypometh 1 insignificant 0.8905189 0.8242386 1.6503e-02 9 0.702021 0.6937489 0.0082723 3.2308e-06 6.0867e-01 weaklyHypermeth 6.7309e-05 1.0000e+00 weaklyHypermeth 6.1793e-03 2.1073e-01 weaklyHypermeth 1.1035e-01 1.0000e+00 insignificant 0.02815300 6.0008e-01 insignificant 1.0000e+00 insignificant 0.892944 0.8248049 0.0687796 9 0.843436 0.7907674 0.05266831 9.5751e-07 7.8809e-01 weaklyHypermeth 0.00031917 1.0000e+00 weaklyHypermeth 2.8051e-03 7.3613e-01 weaklyHypermeth 0.382442 1.0000e+00 insignificant -3.8196e-02 0.2918979 insignificant 1.00000 insignificant 0.9173043 0.8242386 0.04098845 8 0.753533 0.6937489 0.05978366 2.0088e-04 9.6474e-01 weaklyHypermeth 4.1850e-03 1.0000e+00 weaklyHypermeth 6.0142e-03 9.8168e-01 weaklyHypermeth 1.2139e-01 1.0000e+00 insignificant 0.1194017 3.9073e-02 weaklyHypermeth 7.2357e-01 insignificant 0.9182891 0.8248049 0.09395751 8 0.856562 0.7907674 0.0657945 6.0543e-08 9.1110e-01 weaklyHypermeth 3.0272e-05 1.0000e+00 weaklyHypermeth 8.3805e-05 8.9956e-01 weaklyHypermeth 0.020951 1.000000 weaklyHypermeth 0.0530529 0.0876610 insignificant 1.00000 insignificant 0.8250636 0.8248049 0.05007335 9 0.7583318 0.7907674 -0.0324356 4.4868e-02 1.2177e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 1.1416e-01 1.7480e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -6.6349e-02 2.0372e-01 insignificant 1.0000000 insignificant chr12 50865050 50866050 41527 KRT80 ENSG00000167767 0.8665404 116 5 0.6731955 97 5 0.3469388 35 5 0.7956522 109 5 0.6000000 26 3 0.8134458 247 5 0.8583333 23 2 0.8133543 78 5 0.5357143 20 0 0.8675214 29 2 0.8876381 189 5 0.7300000 18 2 0.8020979 91 5 0.8539394 43 5 0.7407895 73 5 1.0000000 3 0 NA 0 0 0.5836536 219 5 0.8380898 226 5 0.849723 168 5 0.732294 66 5 0.7500000 23 3 0.7339286 52 3 0.6200000 21 3 0.6666667 8 0 0.8516339 169 5 0.7610073 130 4 0.616667 19 0 0.88973120 151 5 0.6426630 141 5 0.8134143 144 5 0.824878 229 5 0.8606838 75 5 0.75000000 160 5 NA 0 0 0.50000000 8 0 0.928571 50 4 0.8055070 283 5 0.8146032 74 5 0.8043885 215 5 0.8033333 61 5 0.79309890 72 5 0.8650000 39 4 0.8479908 0.6500755 0.47204969 0.8071834 0.5362319 0.7796181 0.8659420 0.8517142 0.8478261 0.8465276 0.8877742 0.7173913 0.7815445 0.8613966 0.8072082 0.9574529 NA 0.8213683 0.8419004 0.863795 0.6355731 0.7613241 0.731755 0.4826087 7.3913e-01 0.8237609 0.8017280 0.583333 0.8809108 0.7619329 0.7707547 0.7901295 0.8725381 0.7858696 NA 0.84103706 0.9565217 0.8896901 0.7536922 0.8383180 0.76956522 0.7920306 0.8706522 0 0.8110803 0.8013877 0.01149487 5 0.677246 0.724888 -0.04764175 0.36450986 4.2925e-01 insignificant 1.000000 1.0000000 insignificant 0.41460018 1.5753e-01 insignificant 1.00000 1.000000 insignificant 0.0189681 0.6701141 lowCoverage 1 lowCoverage 0.8097345 0.7795139 1.4977e-02 5 0.580497 0.8519091 -0.2714125 1.2747e-01 1.2717e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9871e-01 3.5067e-02 inconclusive 1.0000e+00 1.0000e+00 insignificant -0.00807730 9.2426e-01 lowCoverage 1.0000e+00 lowCoverage 0.811530 0.8069414 0.0026325 5 0.812695 0.8097807 0.00291455 5.1691e-01 2.5375e-01 insignificant 1.00000000 1.0000e+00 insignificant 7.2797e-01 2.1127e-01 insignificant 1.000000 1.0000e+00 insignificant -5.5210e-02 0.1550331 lowCoverage 1.00000 lowCoverage 0.8026087 0.7779720 0.01781695 5 0.803199 0.7926727 0.01052591 5.8271e-02 3.2598e-02 inconclusive 5.5496e-01 1.0000e+00 insignificant 7.4485e-01 3.1186e-02 inconclusive 1.0000e+00 1.0000e+00 insignificant -0.0270454 7.4297e-01 lowCoverage 1.0000e+00 lowCoverage 0.8026087 0.8069414 -0.00495239 5 0.803199 0.8097807 -0.0065820 5.0475e-01 2.9567e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.3825e-01 4.1366e-01 insignificant 1.000000 1.000000 insignificant -0.0741778 0.0236910 lowCoverage 1.00000 lowCoverage 0.7779720 0.8069414 -0.02213351 5 0.7926727 0.8097807 -0.0171079 1.3913e-01 4.4395e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.0146e-01 8.0921e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -4.7132e-02 5.5973e-01 lowCoverage 1.0000000 lowCoverage chr12 50884450 50885450 41529 KRT80 ENSG00000167767 0.8974805 105 5 0.7211482 479 5 0.8097436 85 5 0.8333070 124 5 0.9010000 102 4 0.8978435 135 5 0.8666667 100 5 0.8565934 160 5 0.8370773 57 5 0.9188571 46 4 0.8386801 241 5 0.8700000 29 4 0.9184275 75 5 0.9232955 49 4 0.8811111 95 5 0.9866667 40 5 NA 0 0 0.8511122 141 5 0.9697143 161 5 0.867485 189 5 0.815556 73 5 0.9200000 37 3 0.8756944 108 5 0.7390671 95 5 0.9018182 31 5 0.9220569 373 5 0.9397969 114 5 0.851641 59 5 0.84320887 172 5 0.9456608 335 5 0.9279633 291 4 0.891841 167 4 0.7398038 229 5 0.97857143 75 5 0.9860465 293 5 1.00000000 4 0 0.704167 127 5 0.7944994 293 4 0.8999313 165 5 0.8023261 115 5 0.9090686 68 5 0.89500000 28 5 0.8292663 119 5 0.8877714 0.7728757 0.79282420 0.8667596 0.9199640 0.9436132 0.8417266 0.8687050 0.8372215 0.9435560 0.8952159 0.8147482 0.9367896 0.9087572 0.8974820 0.9697842 NA 0.8622243 0.9865776 0.893978 0.8725020 0.9625899 0.878772 0.9417882 9.2139e-01 0.9217178 0.9441768 0.951412 0.9036612 0.9465660 0.9034398 0.8739431 0.8058684 0.9709661 0.98745190 0.97389220 0.8613309 0.6942729 0.9463619 0.8573076 0.93453414 0.9404676 0.8782056 1 0.8524658 0.9146868 -0.04748177 5 0.852594 0.897886 -0.04529142 0.99989703 2.6722e-03 weaklyHypometh 1.000000 0.6680533 insignificant 0.91114685 9.0740e-02 insignificant 1.00000 1.000000 insignificant -0.0050757 0.8205190 lowCoverage 1 lowCoverage 0.8524658 0.8843137 -1.5435e-02 5 0.852594 0.8791490 -0.0265548 9.2759e-01 1.7174e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.1192e-01 4.7911e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00893500 8.8111e-01 lowCoverage 1.0000e+00 lowCoverage 0.852466 0.8606061 -0.0208096 5 0.852594 0.8661083 -0.01351411 8.3795e-01 1.3718e-01 insignificant 1.00000000 1.0000e+00 insignificant 5.7859e-01 2.4149e-01 insignificant 1.000000 1.0000e+00 insignificant 8.9978e-03 0.7329809 lowCoverage 1.00000 lowCoverage 0.9137466 0.8834476 0.02590125 5 0.803794 0.7326242 0.07116945 3.2322e-01 8.3279e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.2524e-01 6.4537e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0140107 8.1759e-01 lowCoverage 1.0000e+00 lowCoverage 0.9146868 0.8606061 0.02533476 5 0.897886 0.8661083 0.0317773 2.0882e-01 8.4873e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.5083e-01 6.1777e-01 insignificant 1.000000 1.000000 insignificant 0.0140736 0.6230969 lowCoverage 1.00000 lowCoverage 0.8843137 0.8606061 -0.00160250 5 0.8791490 0.8661083 0.0130406 5.4435e-01 4.6792e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.9958e-01 6.9831e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.2828e-05 9.9919e-01 lowCoverage 1.0000000 lowCoverage chr12 50958450 50959450 41537 ENSG00000135477 0.1935498 675 18 0.1704284 846 20 0.1817337 772 20 0.1992189 357 13 0.2529216 410 17 0.2411151 825 20 0.2078908 869 17 0.2276404 628 17 0.2138262 629 17 0.2568150 556 17 0.2391521 810 17 0.1334777 660 15 0.1711074 716 17 0.6521930 54 4 0.1967058 800 17 0.1992347 755 17 0.1089802 638 15 0.1997274 419 10 0.2121254 417 17 0.176302 645 20 0.286940 285 17 0.2004153 176 9 0.2112631 628 20 0.2459057 339 17 0.2338638 167 8 0.1608644 1020 20 0.2009862 235 17 0.255842 187 14 0.23483135 420 17 0.1733608 1095 20 0.1690075 1014 20 0.271873 769 17 0.1562336 822 20 0.18038774 538 17 0.1527778 299 14 0.05052651 162 12 0.157531 242 15 0.1234183 941 20 0.1808043 761 19 0.2026781 728 17 0.1561381 463 19 0.21870888 493 17 0.1734861 435 16 0.3488287 0.2929195 0.31576416 0.3331969 0.3640882 0.3853307 0.3301639 0.3422218 0.3159942 0.3963351 0.3625238 0.2982345 0.2297325 NA 0.3000954 0.3151230 0.3020779 0.3349625 0.3018819 0.289022 0.4245573 0.2991815 0.364903 0.3441104 3.4438e-01 0.2749504 0.3344258 0.361510 0.3452880 0.2872824 0.2930619 0.4029741 0.2682373 0.2696595 0.21837409 0.20032583 0.2460268 0.1678601 0.2827447 0.3212173 0.27083147 0.2863645 0.2954593 8 0.2398846 0.2238358 -0.00255147 19 0.192153 0.193959 -0.00180594 0.20380535 8.0013e-01 insignificant 1.000000 1.0000000 insignificant 0.33499687 8.2299e-01 insignificant 1.00000 1.000000 insignificant 0.0012778 0.9624323 insignificant 1 insignificant 0.2398846 0.1511318 8.8374e-02 19 0.192153 0.1432753 0.0488775 4.4643e-15 9.4354e-01 weaklyHypermeth 2.2321e-13 1.0000e+00 weaklyHypermeth 1.7282e-08 9.9089e-01 weaklyHypermeth 1.4402e-06 1.0000e+00 weaklyHypermeth 0.08489486 1.1458e-02 weaklyHypermeth 2.6040e-01 insignificant 0.239885 0.3506944 0.0357861 17 0.192153 0.1819170 0.01023586 4.9778e-05 6.7512e-01 weaklyHypermeth 0.00622230 1.0000e+00 weaklyHypermeth 3.0595e-03 9.2013e-01 weaklyHypermeth 0.382442 1.0000e+00 insignificant 3.5344e-02 0.1953589 insignificant 1.00000 insignificant 0.2238358 0.1511318 0.09296736 20 0.193959 0.1432753 0.05068347 2.1045e-08 8.4365e-01 weaklyHypermeth 7.7943e-07 1.0000e+00 weaklyHypermeth 6.3561e-06 9.7388e-01 weaklyHypermeth 3.3453e-04 1.0000e+00 weaklyHypermeth 0.0836170 4.3516e-03 weaklyHypermeth 1.1452e-01 insignificant 0.2238358 0.3506944 0.03921820 17 0.193959 0.1819170 0.0120418 2.6936e-02 6.0899e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 1.4505e-02 9.5462e-01 weaklyHypermeth 0.901867 1.000000 insignificant 0.0340663 0.0561955 insignificant 1.00000 insignificant 0.1511318 0.3506944 -0.06696337 17 0.1432753 0.1819170 -0.0386417 9.2378e-01 1.0740e-03 weaklyHypometh 1.0000e+00 2.1918e-02 weaklyHypometh 9.9534e-01 3.6539e-02 weaklyHypometh 1.0000e+00 5.9122e-01 insignificant -4.9551e-02 5.2946e-02 insignificant 0.8405479 insignificant chr12 51025250 51026250 41541 KRT83 ENSG00000170523 0.7260943 86 5 0.7090281 93 5 0.7800000 30 3 0.7217399 80 5 0.6388889 41 3 0.7390580 124 5 0.7555556 43 3 0.6918182 71 5 0.7142857 49 5 0.5711111 31 5 0.7033078 92 5 0.7222222 22 1 0.7746032 31 3 0.7866667 24 3 0.7325641 41 5 1.0000000 10 0 0.8208333 26 1 0.6952882 79 3 0.8107143 51 5 0.653846 42 4 0.657143 15 2 0.6000000 7 0 0.6115385 46 3 0.6250000 28 2 0.8541667 25 2 0.7417635 96 5 0.7416667 18 2 0.916667 8 0 0.43333333 56 5 0.8007215 88 5 0.4838113 65 5 0.816410 65 5 0.6951905 87 5 0.67083333 52 4 0.5357843 97 5 0.42500000 14 2 0.739286 33 4 0.7295626 72 5 0.6780513 76 5 0.7303627 91 5 0.7811966 84 5 0.76388889 52 2 0.7308254 72 5 0.7266252 0.6495058 0.73846154 0.7462102 0.6495726 0.6701348 0.7521368 0.6566434 0.7582418 0.5196581 0.6902499 0.7179487 0.7787546 0.7487179 0.7193294 0.9199271 0.8541667 0.6946742 0.7967033 0.771203 0.8163838 0.6153846 0.633136 0.7500000 8.3550e-01 0.7475682 0.7098562 0.888091 0.5846154 0.7893218 0.7468642 0.7767258 0.6610989 0.6730769 0.51055807 0.49515191 0.7802198 0.7052442 0.6782643 0.6830755 0.81722551 0.7484182 0.7763614 0 0.7063790 0.7329435 -0.02678681 5 0.646908 0.577055 0.06985275 0.98927028 3.3648e-01 insignificant 1.000000 1.0000000 insignificant 0.48930003 5.3438e-01 insignificant 1.00000 1.000000 insignificant 0.0471962 0.3278189 lowCoverage 1 lowCoverage 0.7059378 0.6535211 5.8811e-02 5 0.705671 0.6568367 0.0488346 4.4850e-03 8.0588e-01 weaklyHypermeth 5.5370e-02 1.0000e+00 weaklyHypermeth 8.2733e-02 8.7243e-01 insignificant 9.4536e-01 1.0000e+00 insignificant 0.10477189 1.0022e-01 lowCoverage 1.0000e+00 lowCoverage 0.705938 0.7466667 -0.0349912 5 0.705671 0.7333618 -0.02769052 8.9529e-01 1.4627e-01 insignificant 1.00000000 1.0000e+00 insignificant 8.1319e-01 5.4119e-01 insignificant 1.000000 1.0000e+00 insignificant 5.1631e-04 0.9844287 lowCoverage 1.00000 lowCoverage 0.7411067 0.6535211 0.08707314 5 0.741211 0.6568367 0.08437412 9.9530e-03 9.7496e-01 weaklyHypermeth 1.2288e-01 1.0000e+00 insignificant 3.0260e-02 9.9799e-01 weaklyHypermeth 4.8032e-01 1.0000e+00 insignificant 0.0575757 4.0474e-01 lowCoverage 1.0000e+00 lowCoverage 0.7411067 0.7466667 0.00300384 5 0.741211 0.7333618 0.0078490 6.0178e-01 5.2349e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.0726e-01 8.2358e-01 insignificant 1.000000 1.000000 insignificant -0.0466799 0.3288824 lowCoverage 1.00000 lowCoverage 0.6535211 0.7466667 -0.09620987 5 0.6568367 0.7333618 -0.0765252 3.1230e-01 1.9949e-02 weaklyHypometh 1.0000e+00 2.6604e-01 insignificant 6.8165e-01 1.5490e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -1.0426e-01 1.0135e-01 lowCoverage 1.0000000 lowCoverage chr12 51553850 51554850 41561 KRT78 ENSG00000170423 0.0835658 413 22 0.0389850 433 21 0.0626035 610 22 0.0216647 121 6 0.0288788 473 23 0.0395751 438 22 0.0504137 596 20 0.0399778 309 20 0.0293883 485 23 0.0305592 419 23 0.0583085 780 23 0.0555169 660 23 0.0259791 527 20 NA 0 0 0.0404171 521 20 0.0472658 529 23 0.0339543 476 23 0.0381419 236 22 0.0278310 446 23 0.035953 583 21 0.091215 133 13 0.0469697 138 14 0.0518239 472 22 0.0363037 220 23 0.0069444 82 8 0.0457788 579 22 0.0625752 248 18 0.081250 122 15 0.02203782 299 20 0.0509840 905 25 0.0434771 545 22 0.054980 695 21 0.0271722 382 22 0.00569170 409 23 0.0666667 222 15 0.00000000 184 18 0.028030 98 10 0.0090786 492 21 0.0825392 418 22 0.0377717 561 20 0.0150104 290 14 0.02273356 421 20 0.0225881 268 10 0.0916932 0.0587702 0.11787981 0.0371252 0.0383183 0.0655566 0.0726559 0.0547686 0.0403008 0.0238822 0.0685625 0.0648464 0.0361336 NA 0.0535714 0.0741165 0.0463580 0.0524642 0.0379021 0.050796 0.1400810 0.0528580 0.091589 0.0386530 1.1827e-02 0.0792292 0.0529935 0.111142 0.0263881 0.0875186 0.0698784 0.0845719 0.0411952 0.0036761 0.13369803 0.00000000 0.0516776 0.0238054 0.1000916 0.0601773 0.02887197 0.0386485 0.0425987 8 0.0549972 0.0619648 -0.00949823 20 0.041314 0.046366 -0.00505152 0.45655515 1.5337e-01 insignificant 1.000000 1.0000000 insignificant 0.29367185 7.8829e-01 insignificant 1.00000 1.000000 insignificant -0.0080030 0.2986568 insignificant 1 insignificant 0.0549972 0.0201455 3.6025e-02 20 0.041314 0.0144292 0.0268851 6.6436e-13 9.9999e-01 weaklyHypermeth 2.7682e-11 1.0000e+00 weaklyHypermeth 6.4206e-09 1.0000e+00 weaklyHypermeth 5.8369e-07 1.0000e+00 weaklyHypermeth 0.01875201 1.2353e-01 insignificant 1.0000e+00 insignificant 0.054997 0.0607763 0.0041286 20 0.041314 0.0361929 0.00512145 1.9933e-02 5.7476e-01 weaklyHypermeth 0.73826796 1.0000e+00 insignificant 7.5324e-02 8.8244e-01 insignificant 1.000000 1.0000e+00 insignificant 5.3967e-03 0.6889652 insignificant 1.00000 insignificant 0.0619648 0.0201455 0.04290976 20 0.046366 0.0144292 0.03193663 2.3744e-09 1.0000e+00 weaklyHypermeth 1.0324e-07 1.0000e+00 weaklyHypermeth 3.6383e-05 1.0000e+00 weaklyHypermeth 1.3994e-03 1.0000e+00 weaklyHypermeth 0.0267550 5.0243e-02 insignificant 8.1036e-01 insignificant 0.0619648 0.0607763 0.01714583 20 0.046366 0.0361929 0.0101730 6.4064e-02 6.6581e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.7995e-01 9.8719e-01 insignificant 1.000000 1.000000 insignificant 0.0133997 0.3679764 insignificant 1.00000 insignificant 0.0201455 0.0607763 -0.03237784 20 0.0144292 0.0361929 -0.0217637 1.0000e+00 5.1780e-06 weaklyHypometh 1.0000e+00 1.4383e-04 weaklyHypometh 1.0000e+00 1.4067e-03 weaklyHypometh 1.0000e+00 4.5377e-02 weaklyHypometh -1.3355e-02 4.1985e-01 insignificant 1.0000000 insignificant chr12 51604150 51605150 41566 KRT8 ENSG00000170421 0.8862715 523 9 0.6794132 289 8 0.7002571 204 8 0.9106215 340 9 0.8756160 142 9 0.8569312 445 7 0.7857833 124 8 0.9327283 204 6 0.7071314 148 6 0.8028519 158 9 0.8651531 352 9 0.7267706 94 8 0.8917557 187 8 0.9009907 113 7 0.8328589 184 9 0.6186869 63 6 0.7343014 108 5 0.7872177 434 9 0.8099119 269 7 0.863345 315 7 0.855556 74 5 0.8853247 95 5 0.8358408 298 9 0.7048712 96 5 0.8676484 162 6 0.8655723 254 7 0.8569934 138 6 0.830812 80 7 0.82327697 193 9 0.9234846 224 6 0.8788346 218 6 0.900654 435 7 0.6900012 231 8 0.68643643 311 9 0.8047515 144 5 0.72222222 26 4 0.692527 129 7 0.7652035 270 6 0.8924951 388 9 0.8379687 423 9 0.8464233 443 9 0.81951938 312 9 0.8372412 334 8 0.8916087 0.7705230 0.64040254 0.8930058 0.8842649 0.8605060 0.7937524 0.9088793 0.8677761 0.8576240 0.9142902 0.6711962 0.9502989 0.9171141 0.8419588 0.5401399 0.7617624 0.7689894 0.8541877 0.896874 0.8396528 0.8556668 0.835271 0.8535119 8.0816e-01 0.8513129 0.8157719 0.797104 0.8519201 0.9019981 0.8975147 0.8970908 0.7501113 0.6426230 0.91356543 0.65431548 0.7878818 0.7620353 0.9251431 0.8626825 0.83299978 0.7880390 0.8667317 5 0.8434838 0.8583407 -0.01505097 8 0.834804 0.856119 -0.02131441 0.50919803 5.1451e-01 insignificant 1.000000 1.0000000 insignificant 0.65250022 1.3083e-01 insignificant 1.00000 1.000000 insignificant -0.0439758 0.0928190 insignificant 1 insignificant 0.8434838 0.7423423 9.5741e-02 6 0.834804 0.6708701 0.1639343 1.3578e-07 5.3849e-01 weaklyHypermeth 3.3117e-06 1.0000e+00 weaklyHypermeth 1.4972e-02 3.5123e-01 weaklyHypermeth 2.3394e-01 1.0000e+00 insignificant 0.08157294 1.0188e-02 weaklyHypermeth 2.4828e-01 insignificant 0.843484 0.8505263 -0.0055464 9 0.834804 0.8587716 -0.02396721 8.9770e-01 5.7110e-01 insignificant 1.00000000 1.0000e+00 insignificant 9.5874e-01 6.1986e-01 insignificant 1.000000 1.0000e+00 insignificant -3.8300e-02 0.1145469 insignificant 1.00000 insignificant 0.8584032 0.7425743 0.10859813 6 0.869199 0.7007910 0.16840793 8.9782e-04 6.0045e-01 weaklyHypermeth 1.5498e-02 1.0000e+00 weaklyHypermeth 5.5637e-02 5.0180e-01 insignificant 7.5185e-01 1.0000e+00 insignificant 0.1255487 3.9300e-04 weaklyHypermeth 1.6375e-02 weaklyHypermeth 0.8583407 0.8505263 0.01125370 8 0.856119 0.8587716 -0.0026528 8.2723e-01 4.5901e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.0511e-01 7.3118e-01 insignificant 1.000000 1.000000 insignificant 0.0056761 0.7806022 insignificant 1.00000 insignificant 0.7423423 0.8505263 -0.09922077 6 0.6708701 0.8587716 -0.1879015 7.6422e-01 1.5151e-03 weaklyHypometh 1.0000e+00 2.7547e-02 weaklyHypometh 5.9043e-01 9.5251e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -1.1987e-01 8.4209e-04 weaklyHypometh 0.0553103 weaklyHypometh chr12 52050850 52051850 41583 SP7 ENSG00000170374 0.0403413 420 11 0.0075621 685 13 0.0051128 820 13 0.0218827 328 8 0.0178895 531 13 0.0762615 458 12 0.0026740 944 13 0.0067528 581 13 0.0081845 869 13 0.0092402 795 13 0.0204265 628 13 0.0050011 912 13 0.0067093 625 13 NA 0 0 0.0099822 777 13 0.0157017 852 13 0.0221598 976 13 0.0275215 452 8 0.0185815 549 13 0.050134 457 13 0.026768 233 12 0.0912698 252 9 0.0072660 475 13 0.0245627 212 12 0.0181818 160 7 0.0086049 744 13 0.0195055 269 12 0.029407 153 12 0.01129966 546 13 0.0083649 862 13 0.0070508 865 13 0.120961 544 12 0.0132346 667 13 0.01364053 484 13 0.1712121 215 9 0.01542208 107 9 0.051488 175 13 0.0017286 668 13 0.0335224 471 11 0.0355120 461 10 0.1082506 304 7 0.02083333 345 10 0.0610054 395 10 0.0403555 0.0065546 0.00887486 0.0404300 0.0117180 0.0745362 0.0039662 0.0136664 0.0100548 0.0135603 0.0199065 0.0042579 0.0097824 NA 0.0122136 0.0135985 0.0145584 0.0421452 0.0175608 0.082322 0.0487581 0.0567163 0.014037 0.0436245 1.7869e-02 0.0110077 0.0247845 0.026163 0.0168330 0.0114925 0.0113408 0.0557536 0.0102812 0.0087724 0.09201124 0.03132790 0.0599690 0.0037796 0.0343214 0.0430705 0.03771304 0.0160878 0.0644195 7 0.0160360 0.0252117 -0.00882101 13 0.013018 0.025898 -0.01288070 0.24092909 4.4204e-01 insignificant 1.000000 1.0000000 insignificant 0.14483844 5.2637e-01 insignificant 1.00000 1.000000 insignificant -0.0115183 0.3267216 insignificant 1 insignificant 0.0160360 0.0202936 -4.1944e-03 13 0.013018 0.0246846 -0.0116670 9.3941e-01 1.6670e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 6.3347e-01 7.5473e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02486908 3.9096e-01 insignificant 1.0000e+00 insignificant 0.016036 0.0298583 -0.0208285 10 0.013018 0.1025069 -0.08948930 5.7831e-01 8.1983e-03 weaklyHypometh 1.00000000 6.3064e-01 insignificant 5.6949e-01 8.9497e-02 insignificant 1.000000 1.0000e+00 insignificant -3.2240e-02 0.1065352 insignificant 1.00000 insignificant 0.0252117 0.0202936 0.00565572 13 0.025898 0.0246846 0.00121372 8.9985e-01 1.5950e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.0181e-01 3.7291e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0133508 6.5221e-01 insignificant 1.0000e+00 insignificant 0.0252117 0.0298583 -0.01709513 10 0.025898 0.1025069 -0.0766086 9.6065e-01 1.0962e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.5659e-01 1.0775e-01 insignificant 1.000000 1.000000 insignificant -0.0207212 0.3020415 insignificant 1.00000 insignificant 0.0202936 0.0298583 -0.02748589 10 0.0246846 0.1025069 -0.0778223 5.7238e-01 2.7141e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.8192e-01 5.1202e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -7.3705e-03 8.1535e-01 insignificant 1.0000000 insignificant chr12 52075550 52076550 41586 SP1 ENSG00000185591 0.6737058 339 11 0.7013633 305 14 0.6196177 256 14 0.7691756 214 10 0.7554267 174 13 0.7846243 467 12 0.7734765 272 14 0.7586855 297 12 0.7030884 255 12 0.7505553 217 12 0.7366813 428 14 0.6800758 160 12 0.7694070 227 12 0.7553030 63 4 0.7462662 228 14 0.6729116 147 11 0.7506951 121 9 0.7424066 187 11 0.8209288 279 10 0.818381 379 12 0.744435 140 10 0.8060606 85 9 0.7947876 212 11 0.5223710 153 12 0.8077478 109 11 0.8108368 457 12 0.6964275 139 12 0.665523 106 8 0.70984557 212 12 0.7685990 428 12 0.6273706 378 12 0.816432 499 12 0.6389909 281 14 0.58472761 217 12 0.6032470 297 10 0.79191919 89 8 0.700545 281 14 0.8209443 396 12 0.7835644 341 11 0.7976774 347 10 0.8212516 263 10 0.76141756 282 8 0.8438072 332 10 0.7017787 0.7268317 0.66078231 0.7752625 0.8012019 0.7787576 0.8093746 0.7702801 0.7055968 0.7743485 0.7912675 0.7521784 0.8052183 0.8120347 0.7891709 0.7210660 0.7437650 0.7518162 0.8150171 0.807670 0.8011019 0.7546325 0.766046 0.7030644 8.2912e-01 0.8010340 0.7156589 0.801294 0.7327091 0.7983062 0.7777178 0.7870594 0.6455457 0.6077225 0.62424011 0.74196000 0.7590709 0.7700195 0.7933466 0.8172014 0.81941974 0.7671374 0.8220095 8 0.7840479 0.7912954 -0.00977875 12 0.689289 0.644067 0.04522184 0.29626672 4.5333e-01 insignificant 1.000000 1.0000000 insignificant 0.51540178 6.5167e-01 insignificant 1.00000 1.000000 insignificant 0.0082691 0.7763156 insignificant 1 insignificant 0.7842042 0.7059577 7.6686e-02 12 0.732369 0.6823152 0.0500541 3.0900e-09 9.9963e-01 weaklyHypermeth 8.9381e-08 1.0000e+00 weaklyHypermeth 7.2460e-05 9.9990e-01 weaklyHypermeth 2.0703e-03 1.0000e+00 weaklyHypermeth 0.04907649 2.8736e-01 insignificant 1.0000e+00 insignificant 0.784102 0.8313099 -0.0366510 10 0.729851 0.7710455 -0.04119487 5.0420e-01 1.5537e-03 weaklyHypometh 1.00000000 1.7263e-01 insignificant 9.9661e-01 1.5458e-02 weaklyHypometh 1.000000 1.0000e+00 insignificant -6.2405e-02 0.0068831 weaklyHypometh 0.76479 insignificant 0.7914237 0.7059577 0.08553611 12 0.642654 0.6823152 -0.03966075 1.7988e-06 9.9631e-01 weaklyHypermeth 4.6124e-05 1.0000e+00 weaklyHypermeth 1.3885e-03 9.8614e-01 weaklyHypermeth 3.0571e-02 1.0000e+00 weaklyHypermeth 0.0408074 4.1783e-01 insignificant 1.0000e+00 insignificant 0.7932577 0.8313099 -0.02525355 10 0.722557 0.7710455 -0.0484881 9.8427e-01 4.2855e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9464e-01 8.6165e-02 insignificant 1.000000 1.000000 insignificant -0.0706739 0.0322781 weaklyHypometh 1.00000 insignificant 0.7052023 0.8313099 -0.11977722 10 0.6369316 0.7710455 -0.1341139 9.9968e-01 8.7573e-07 weaklyHypometh 1.0000e+00 2.8249e-05 weaklyHypometh 1.0000e+00 1.4066e-05 weaklyHypometh 1.0000e+00 1.1722e-03 weaklyHypometh -1.1148e-01 3.9197e-02 weaklyHypometh 0.7304858 insignificant chr12 52083650 52084650 41587 SP1 ENSG00000185591 0.7819841 183 9 0.7470874 231 12 0.6714744 151 12 0.8532862 194 12 0.6597581 171 12 0.8776497 263 12 0.7927106 177 12 0.7756110 256 14 0.6767126 144 12 0.7809829 104 9 0.8006227 402 14 0.6083333 72 8 0.7001863 189 12 0.7507576 100 9 0.7455715 107 9 0.7892857 58 8 0.5585152 760 8 0.7927563 162 10 0.7472439 132 9 0.660602 157 9 0.842308 81 9 0.9212963 53 5 0.6485103 132 9 0.7777379 135 10 0.7653770 82 9 0.7673513 317 12 0.6379343 152 9 0.487037 51 6 0.51583660 123 12 0.7925041 256 12 0.7967728 214 12 0.787559 208 14 0.7268266 173 12 0.72059885 105 9 0.6984308 305 12 0.83035714 112 8 0.659973 125 12 0.8044425 266 12 0.8136668 158 9 0.8344321 222 14 0.8861248 216 12 0.82527113 142 12 0.7979286 176 12 0.8055930 0.7065578 0.75714732 0.8230417 0.7046869 0.8526114 0.7835720 0.7518010 0.7550321 0.8101892 0.7523372 0.6164170 0.7084908 0.7659744 0.7655830 0.8159176 0.7704848 0.8379321 0.8791154 0.673774 0.7671659 0.9003959 0.781220 0.7699365 7.7266e-01 0.8440127 0.7681553 0.669580 0.6740684 0.7627645 0.7773264 0.7317239 0.6495204 0.6536472 0.61607980 0.79494382 0.7088636 0.8085339 0.8410013 0.8601444 0.83211705 0.8068705 0.7528509 6 0.7348617 0.7760532 -0.01654929 12 0.735318 0.704537 0.03078103 0.60382604 7.0470e-01 insignificant 1.000000 1.0000000 insignificant 0.37103439 9.6773e-01 insignificant 1.00000 1.000000 insignificant 0.0102045 0.8091692 insignificant 1 insignificant 0.7348617 0.7090239 5.4191e-02 12 0.735318 0.6982248 0.0370937 2.8392e-02 8.6160e-01 weaklyHypermeth 2.8111e-01 1.0000e+00 insignificant 3.5120e-01 8.6120e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00154820 9.6229e-01 insignificant 1.0000e+00 insignificant 0.734862 0.8019694 -0.0635342 12 0.735318 0.8290329 -0.09371446 9.8989e-01 1.1002e-04 weaklyHypometh 1.00000000 2.7506e-02 weaklyHypometh 9.9989e-01 5.5000e-02 insignificant 1.000000 1.0000e+00 insignificant -9.2928e-02 0.0010089 weaklyHypometh 0.30712 insignificant 0.7760532 0.7090239 0.06996382 12 0.704537 0.6982248 0.00631263 1.0727e-01 9.0435e-01 insignificant 9.2476e-01 1.0000e+00 insignificant 7.2146e-01 7.8063e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0117527 8.0121e-01 insignificant 1.0000e+00 insignificant 0.7760532 0.8019694 -0.04335797 12 0.704537 0.8290329 -0.1244955 8.5247e-01 4.7755e-03 weaklyHypometh 1.0000e+00 6.8221e-01 insignificant 9.9948e-01 3.7455e-02 weaklyHypometh 1.000000 1.000000 insignificant -0.1031327 0.0231486 weaklyHypometh 1.00000 insignificant 0.7090239 0.8019694 -0.11262791 12 0.6982248 0.8290329 -0.1308081 9.8023e-01 2.8245e-02 weaklyHypometh 1.0000e+00 3.5753e-01 insignificant 9.9954e-01 7.5703e-02 insignificant 1.0000e+00 9.6695e-01 insignificant -9.1380e-02 1.7608e-02 weaklyHypometh 0.4011464 insignificant chr12 52100250 52101250 41590 SP1 ENSG00000185591 0.5994963 242 7 0.5088221 138 7 0.5174320 107 7 0.6914919 177 7 0.6238731 78 6 0.6946044 498 7 0.5360578 132 7 0.5817914 127 7 0.6070558 121 7 0.5749867 80 7 0.6092620 158 7 0.6894528 94 7 0.6011772 147 7 0.8388889 35 3 0.5613655 116 7 0.5406308 60 6 0.5680708 40 3 0.7829820 146 7 0.4169371 132 4 0.605954 300 7 0.578571 53 6 0.6500000 85 7 0.7158551 117 7 0.7579095 84 7 0.7035583 61 4 0.6074730 141 7 0.6650175 82 7 0.696875 45 5 0.69668670 106 4 0.5742726 131 7 0.6312105 117 7 0.664060 330 7 0.5338451 122 7 0.53129252 84 4 0.3146205 109 7 0.52301587 22 3 0.489718 125 7 0.4894435 96 7 0.6479315 234 7 0.7127305 184 7 0.7060720 162 7 0.70057620 126 6 0.4886148 152 7 0.7074918 0.5461228 0.55243836 0.7191761 0.7194292 0.6798736 0.5710889 0.6337819 0.6206420 0.6419039 0.7455900 0.6946856 0.6952807 0.6767432 0.6869429 0.5931769 0.5792334 0.7547897 0.6116865 0.636599 0.6133067 0.6338102 0.720334 0.7202775 7.8408e-01 0.6548607 0.6933659 0.852792 0.7031936 0.5882772 0.6830692 0.7006250 0.6263871 0.5315688 0.53961657 0.60299541 0.5740343 0.5926601 0.6627991 0.7352052 0.69634249 0.7090876 0.5560253 3 0.6711066 0.6930473 -0.02276533 7 0.584333 0.634820 -0.05048736 0.95313600 4.8817e-02 weaklyHypometh 1.000000 1.0000000 insignificant 0.99818195 5.6095e-02 insignificant 1.00000 1.000000 insignificant -0.0542741 0.0530324 insignificant 1 insignificant 0.6711066 0.5465950 1.1437e-01 7 0.584333 0.4416818 0.1426510 1.2312e-07 1.0000e+00 weaklyHypermeth 3.0779e-06 1.0000e+00 weaklyHypermeth 2.8963e-03 9.9973e-01 weaklyHypermeth 5.4647e-02 1.0000e+00 weaklyHypermeth 0.12719403 1.1089e-02 weaklyHypermeth 2.5789e-01 insignificant 0.671107 0.6818182 -0.0118039 7 0.584333 0.6255791 -0.04124623 7.9938e-01 2.9014e-01 insignificant 1.00000000 1.0000e+00 insignificant 8.7442e-01 4.8812e-02 weaklyHypometh 1.000000 1.0000e+00 insignificant -4.3668e-02 0.3909298 insignificant 1.00000 insignificant 0.6930473 0.5465950 0.13759330 7 0.634820 0.4416818 0.19313836 3.4640e-09 9.9997e-01 weaklyHypermeth 1.4434e-07 1.0000e+00 weaklyHypermeth 5.9517e-05 9.9998e-01 weaklyHypermeth 2.1256e-03 1.0000e+00 weaklyHypermeth 0.1814682 1.7074e-03 weaklyHypermeth 5.8875e-02 weaklyHypermeth 0.6930473 0.6818182 0.01109744 7 0.634820 0.6255791 0.0092411 1.9930e-01 6.7707e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.9764e-01 7.4452e-01 insignificant 1.000000 1.000000 insignificant 0.0106058 0.8236407 insignificant 1.00000 insignificant 0.5465950 0.6818182 -0.12569649 7 0.4416818 0.6255791 -0.1838972 9.9994e-01 1.6398e-05 weaklyHypometh 1.0000e+00 4.2045e-04 weaklyHypometh 9.9962e-01 2.1643e-03 weaklyHypometh 1.0000e+00 5.6956e-02 weaklyHypometh -1.7086e-01 1.3348e-02 weaklyHypometh 0.3556818 insignificant chr12 52172650 52173650 41594 PCBP2 ENSG00000197111 0.0188920 1264 36 0.0168001 1059 34 0.0061829 1613 35 0.0513426 1265 34 0.0535813 684 31 0.0581249 1690 39 0.0115070 1471 35 0.0440449 1224 36 0.0071935 1644 35 0.0271862 1358 31 0.0096473 1175 36 0.0310696 1532 35 0.0298932 1406 35 0.0890805 357 9 0.0096485 1635 35 0.0293062 1385 35 0.0058463 1223 31 0.0067143 1392 37 0.0569285 977 36 0.073734 1325 38 0.016216 474 31 0.0214643 713 29 0.0217425 1062 35 0.0602253 540 32 0.0285822 556 28 0.0032590 1638 38 0.0162042 787 32 0.058486 450 29 0.01925892 797 33 0.0397233 1703 39 0.0431474 1436 38 0.066694 1847 39 0.0197138 1101 32 0.03285985 759 33 0.0000000 686 34 0.00086207 546 35 0.060578 510 36 0.0077949 1423 38 0.0126914 1437 38 0.0334464 1454 36 0.0131199 1251 32 0.00146322 1397 36 0.0431553 1440 36 0.0108527 0.0071933 0.01014162 0.0059055 0.0099185 0.0101626 0.0066814 0.0041248 0.0067576 0.0066303 0.0090546 0.0101533 0.0222015 0.0071226 0.0101763 0.0063453 0.0063844 0.0081734 0.0156036 0.020420 0.0021231 0.0116724 0.021860 0.0190432 1.3172e-02 0.0033926 0.0118977 0.017897 0.0178238 0.0088307 0.0080109 0.0086260 0.0135950 0.0087279 0.00028987 0.00000000 0.0281037 0.0055150 0.0115698 0.0051940 0.00620566 0.0025337 0.0178489 25 0.0086455 0.0114981 -0.00148278 35 0.059844 0.063267 -0.00342380 0.83992106 4.8180e-01 insignificant 1.000000 1.0000000 insignificant 0.68568474 6.1307e-01 insignificant 1.00000 1.000000 insignificant -0.0010808 0.8949211 insignificant 1 insignificant 0.0086069 0.0095522 1.9549e-05 35 0.038476 0.0360985 0.0023780 8.0051e-01 7.9462e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.6154e-01 9.9760e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01153471 3.2410e-01 insignificant 1.0000e+00 insignificant 0.008532 0.0067345 0.0013615 33 0.029594 0.0337919 -0.00419754 5.2373e-01 9.8037e-01 insignificant 1.00000000 1.0000e+00 insignificant 7.3915e-01 9.0369e-01 insignificant 1.000000 1.0000e+00 insignificant 1.1061e-02 0.2711105 insignificant 1.00000 insignificant 0.0114157 0.0095522 0.00169336 35 0.041978 0.0360985 0.00587961 8.7151e-01 8.7384e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.2286e-01 9.9885e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0126155 2.8967e-01 insignificant 1.0000e+00 insignificant 0.0112641 0.0064498 0.00220650 33 0.032855 0.0102259 0.0226286 6.9971e-01 9.9468e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3294e-01 9.9560e-01 insignificant 1.000000 1.000000 insignificant 0.0121417 0.2387788 insignificant 1.00000 insignificant 0.0093607 0.0064498 0.00093333 36 0.0265447 0.0102259 0.0163188 9.3362e-01 9.9882e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9988e-01 9.9820e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -4.7377e-04 9.6988e-01 insignificant 1.0000000 insignificant chr12 52375650 52376650 41602 ATP5G2 ENSG00000135390 0.0283333 184 8 0.0824375 320 8 0.0053739 381 8 0.0073529 119 8 0.0108025 232 8 0.0285971 336 8 0.0592773 452 8 0.2562767 294 8 0.1322290 469 8 0.0219318 547 8 0.0654108 222 6 0.0148595 448 8 0.0166667 345 8 0.0027174 119 5 0.0182258 347 8 0.0159444 349 8 0.0151509 534 5 0.0312500 120 7 0.0383523 238 8 0.224096 252 8 0.101852 109 7 0.0353084 123 8 0.0562616 252 8 0.0678571 146 8 0.0547624 103 6 0.0127397 318 8 0.0238616 167 7 0.108088 162 8 0.00209644 227 5 0.0176515 335 8 0.0501634 369 8 0.011250 337 8 0.0494615 292 8 0.01537698 211 5 0.0089286 154 7 0.09090909 65 4 0.058632 119 7 0.0394456 269 7 0.1411445 245 8 0.1408730 181 8 0.0250000 88 6 0.00480769 207 8 0.0238636 140 8 0.0313725 0.0265869 0.00558018 0.0119534 0.0128738 0.0218525 0.0484703 0.0311817 0.0219661 0.0220588 0.0572984 0.0274941 0.0071301 0.0121134 0.0209879 0.0478015 0.0231455 0.0133690 0.0180785 0.041509 0.0148544 0.0369817 0.053301 0.0343774 7.7027e-02 0.0169402 0.0180201 0.035056 0.0070629 0.0131583 0.0463377 0.0224599 0.0309631 0.0244249 0.00417781 0.00000000 0.0379976 0.0283628 0.0190688 0.0162338 0.01336898 0.0038050 0.0114244 5 0.0210843 0.0294896 -0.00517564 8 0.079812 0.101797 -0.02198581 0.95447689 2.8312e-01 insignificant 1.000000 1.0000000 insignificant 0.91475212 8.1333e-01 insignificant 1.00000 1.000000 insignificant 0.0086066 0.6507168 insignificant 1 insignificant 0.0210843 0.0252480 -5.0642e-04 7 0.079812 0.0908496 -0.0110380 8.5283e-01 3.3999e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.8420e-01 9.2831e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00997191 6.2493e-01 insignificant 1.0000e+00 insignificant 0.020684 0.0174216 0.0069059 8 0.058755 0.2205907 -0.16183558 4.1388e-01 1.2489e-02 inconclusive 1.00000000 8.0662e-01 insignificant 3.7837e-01 2.7302e-01 insignificant 1.000000 1.0000e+00 insignificant -1.3373e-02 0.7091617 insignificant 1.00000 insignificant 0.0294562 0.0252252 0.00536171 7 0.094526 0.0843604 0.01016584 8.2734e-01 9.1472e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3298e-01 9.9738e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0013653 9.3282e-01 insignificant 1.0000e+00 insignificant 0.0292109 0.0174216 0.01257504 8 0.082337 0.2205907 -0.1382540 2.4221e-01 7.3823e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.7156e-01 4.1537e-01 insignificant 1.000000 1.000000 insignificant -0.0219801 0.5231249 insignificant 1.00000 insignificant 0.0244787 0.0174216 0.00854126 7 0.0681045 0.2205907 -0.1524862 2.1082e-01 9.4829e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.5745e-01 7.2243e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -2.3345e-02 5.0616e-01 insignificant 1.0000000 insignificant chr12 52643650 52644650 41611 HOXC12 ENSG00000123407 0.0614707 538 9 0.0807147 754 8 0.0797858 353 9 0.0288158 218 3 0.0777754 296 8 0.1622866 487 9 0.1401464 499 9 0.2287742 358 8 0.0692307 489 8 0.1126351 292 8 0.2462505 505 8 0.1169260 317 9 0.1022682 348 9 0.1805453 141 3 0.1090973 381 9 0.0989645 311 8 0.0893862 2224 9 0.0997633 381 7 0.1950494 425 9 0.083582 490 9 0.140242 144 9 0.0553034 113 9 0.1634083 357 9 0.1769608 226 8 0.0000000 28 2 0.1089857 696 9 0.1079372 153 8 0.199669 159 8 0.10003163 265 8 0.1103406 757 9 0.0516434 556 8 0.153533 550 8 0.0780561 486 9 0.03949275 215 8 0.2500000 11 0 0.01785714 84 6 0.157649 425 9 0.0269848 508 8 0.0756943 508 9 0.0858852 397 8 0.0670465 298 9 0.05380961 265 8 0.1464883 314 9 0.0796730 0.1075359 0.07793634 0.0666295 0.0779104 0.1736472 0.1374302 0.1400738 0.1025695 0.1268463 0.1716238 0.1509738 0.0945571 0.1016240 0.1309964 0.1111015 0.0210518 0.1089729 0.0956397 0.084603 0.1576283 0.0840777 0.127319 0.1223377 0.0000e+00 0.1140063 0.1172981 0.154754 0.1684515 0.0611314 0.0839124 0.1844672 0.0482939 0.0508273 0.10008211 0.00879662 0.1516608 0.0209163 0.0794081 0.0631896 0.06518344 0.0494398 0.1361746 5 0.1299072 0.1203796 -0.00836971 9 0.128864 0.129666 -0.00080187 0.43432409 1.5935e-01 insignificant 1.000000 1.0000000 insignificant 0.15231800 8.5936e-01 insignificant 1.00000 1.000000 insignificant 0.0041689 0.8443020 insignificant 1 insignificant 0.1299072 0.0705610 4.8405e-02 9 0.128864 0.0854010 0.0434628 2.0461e-02 9.3581e-01 weaklyHypermeth 2.1904e-01 1.0000e+00 insignificant 2.4696e-03 9.9972e-01 weaklyHypermeth 4.8423e-02 1.0000e+00 weaklyHypermeth 0.02316673 5.7816e-01 insignificant 1.0000e+00 insignificant 0.129875 0.0808081 0.0333184 9 0.126088 0.0869117 0.03917624 9.5492e-02 5.9155e-01 insignificant 1.00000000 1.0000e+00 insignificant 1.9234e-02 8.7530e-01 weaklyHypermeth 1.000000 1.0000e+00 insignificant 3.2389e-02 0.1461797 insignificant 1.00000 insignificant 0.1203796 0.0705610 0.05274713 9 0.129666 0.0854010 0.04426464 2.7433e-02 9.6065e-01 weaklyHypermeth 3.0481e-01 1.0000e+00 insignificant 8.5249e-02 9.6454e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0189979 6.5637e-01 insignificant 1.0000e+00 insignificant 0.1196989 0.0808081 0.03979582 9 0.114833 0.0869117 0.0279215 4.2816e-02 8.6642e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 3.6765e-01 8.6711e-01 insignificant 1.000000 1.000000 insignificant 0.0282198 0.2457540 insignificant 1.00000 insignificant 0.0701856 0.0808081 -0.01045781 9 0.0726678 0.0869117 -0.0142439 7.5176e-01 2.0054e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7514e-01 1.3286e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.2219e-03 8.2737e-01 insignificant 1.0000000 insignificant chr12 52754350 52755350 41615 ENSG00000207571 0.6997418 284 8 0.7470480 144 8 0.6449712 161 8 0.8445735 233 8 0.6905051 85 8 0.7859971 384 8 0.7510702 87 4 0.7553713 142 8 0.8373693 94 8 0.7207777 122 8 0.7998183 299 8 0.4319362 59 4 0.7439506 191 8 0.7257143 27 5 0.8044203 134 8 0.5465168 103 8 0.6777304 73 4 0.5973307 263 8 0.7950262 131 4 0.773648 276 8 0.674035 81 2 0.7393519 115 8 0.7197984 170 8 0.8266420 139 6 0.8332108 108 8 0.8138836 242 8 0.8907300 199 7 0.936748 93 4 0.81209758 102 7 0.6700647 209 8 0.7945840 218 8 0.734808 430 8 0.5970956 123 8 0.65248538 164 8 0.6402831 173 8 0.83528983 139 4 0.552987 98 5 0.7579004 146 8 0.7865028 253 8 0.8371633 306 8 0.8456595 264 8 0.86314324 255 8 0.7618262 248 8 0.7637973 0.7130321 0.69540208 0.8273049 0.6424938 0.8105915 0.7088228 0.7458595 0.8489389 0.8246399 0.8051168 0.5626442 0.7987138 0.6002069 0.7774618 0.6704267 0.7483071 0.8035770 0.8000532 0.781856 0.8277409 0.8258197 0.709580 0.9018978 8.2947e-01 0.8141799 0.9086500 0.902245 0.8080719 0.7673052 0.7880220 0.8440796 0.6555896 0.7124341 0.64335062 0.81470123 0.6717799 0.7559520 0.8269613 0.8432878 0.82313684 0.8371756 0.8463338 4 0.7670109 0.8257360 -0.05958076 8 0.695140 0.750592 -0.05545137 0.94176772 1.4234e-04 weaklyHypometh 1.000000 0.0711707 weaklyHypometh 0.96762413 4.8363e-05 weaklyHypometh 1.00000 0.048363 weaklyHypometh -0.0684870 0.0465209 weaklyHypometh 1 insignificant 0.7680098 0.6975089 6.7803e-02 8 0.707893 0.6711466 0.0367466 1.8581e-04 9.8962e-01 weaklyHypermeth 3.2036e-03 1.0000e+00 weaklyHypermeth 3.1326e-02 9.8381e-01 weaklyHypermeth 4.6067e-01 1.0000e+00 insignificant 0.04600228 3.7089e-01 insignificant 1.0000e+00 insignificant 0.768032 0.8318250 -0.0734488 8 0.731869 0.7483336 -0.01646407 9.9460e-01 1.0955e-04 weaklyHypometh 1.00000000 2.7506e-02 weaklyHypometh 9.9757e-01 4.8619e-04 weaklyHypometh 1.000000 1.6206e-01 insignificant -1.0018e-01 0.0037595 weaklyHypometh 0.54538 insignificant 0.8275369 0.6975089 0.13144862 8 0.823427 0.6711466 0.15228005 4.0433e-09 1.0000e+00 weaklyHypermeth 1.6173e-07 1.0000e+00 weaklyHypermeth 1.3484e-06 1.0000e+00 weaklyHypermeth 9.6313e-05 1.0000e+00 weaklyHypermeth 0.1144893 4.7063e-02 weaklyHypermeth 8.0410e-01 insignificant 0.8261077 0.8318250 -0.00712143 8 0.750855 0.7483336 0.0025212 5.4366e-01 1.5122e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.4777e-01 2.9975e-01 insignificant 1.000000 1.000000 insignificant -0.0316961 0.3159848 insignificant 1.00000 insignificant 0.6976190 0.8324528 -0.13897432 8 0.6728266 0.8418753 -0.1690487 1.0000e+00 2.1735e-08 weaklyHypometh 1.0000e+00 1.0350e-06 weaklyHypometh 1.0000e+00 6.1302e-07 weaklyHypometh 1.0000e+00 1.5970e-04 weaklyHypometh -1.4619e-01 1.7507e-02 weaklyHypometh 0.4011464 insignificant chr12 52896050 52897050 41622 SMUG1 ENSG00000123415 0.5316521 124 4 0.5015909 276 6 0.5295488 260 6 0.2132353 89 1 0.6200346 183 6 0.5981127 166 5 0.5138853 282 6 0.5947911 232 6 0.4876705 268 6 0.6354266 191 6 0.5643982 213 6 0.5550904 173 6 0.4763483 259 6 0.0416667 24 1 0.5790451 204 6 0.6807489 95 6 0.8371255 117 5 0.7648810 186 4 0.7566245 270 7 0.640383 125 7 0.611809 88 6 0.2243590 22 1 0.4004987 139 7 0.4509560 74 6 0.0748663 187 1 0.5595283 247 6 0.4702831 108 6 0.656920 57 5 0.50301698 252 6 0.3397408 385 7 0.6959941 218 7 0.297368 163 7 0.1835328 300 6 0.26125145 230 6 0.1586895 152 5 0.05217391 62 2 0.288135 94 6 0.0624551 392 7 0.5736559 87 4 0.4101587 106 4 0.3861658 113 4 0.60714286 65 1 0.5716895 86 1 0.1334290 0.1537424 0.20161644 0.2726186 0.1896493 0.2306373 0.1448393 0.2693806 0.2005421 0.1661972 0.1810516 0.1850045 0.1068859 0.1602820 0.1547218 0.3567155 0.2151489 0.2162698 0.2588838 0.235384 0.3715885 0.2061966 0.162082 0.1159226 1.7393e-01 0.1881753 0.1501656 0.168860 0.2357473 0.1026290 0.2095836 0.1927557 0.0990600 0.2777620 0.06342919 0.23452420 0.0692410 0.0154613 0.1886694 0.1611111 0.11770354 0.3750000 0.2848174 1 0.5203426 0.4427835 0.04010346 6 0.654467 0.412695 0.24177117 0.00404849 9.9991e-01 weaklyHypermeth 1.000000 1.0000000 insignificant 0.00701207 9.9994e-01 weaklyHypermeth 1.00000 1.000000 insignificant 0.1156680 0.0948972 insignificant 1 insignificant 0.5200857 0.1780488 3.5164e-01 6 0.555743 0.1581831 0.3975596 8.5911e-30 9.9999e-01 hypermethylated 1.7182e-27 1.0000e+00 hypermethylated 1.1096e-12 1.0000e+00 hypermethylated 5.5481e-10 1.0000e+00 hypermethylated 0.38840668 4.0270e-06 hypermethylated 3.0977e-04 hypermethylated 0.520214 0.2214912 -0.0023939 2 0.611275 0.5315302 0.07974462 5.8150e-04 4.3982e-01 lowCoverage 0.05814988 1.0000e+00 lowCoverage 1.8737e-02 4.8848e-01 lowCoverage 1.000000 1.0000e+00 lowCoverage 4.6350e-02 0.4626485 lowCoverage 1.00000 lowCoverage 0.4431818 0.1780488 0.28169287 6 0.459180 0.1581831 0.30099662 3.3498e-14 9.9988e-01 hypermethylated 1.7631e-12 1.0000e+00 hypermethylated 7.3972e-07 9.9999e-01 hypermethylated 7.3972e-05 1.0000e+00 hypermethylated 0.2727387 8.5627e-04 hypermethylated 3.4251e-02 hypermethylated 0.4432405 0.2214912 -0.02679086 2 0.464282 0.5315302 -0.0672479 3.1631e-01 2.4753e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 3.5612e-01 2.6088e-01 lowCoverage 1.000000 1.000000 lowCoverage -0.0693176 0.3425436 lowCoverage 1.00000 lowCoverage 0.1780488 0.2197802 -0.12980199 2 0.1581831 0.4646060 -0.3064228 1.0000e+00 5.2632e-08 lowCoverage 1.0000e+00 2.3717e-06 lowCoverage 1.0000e+00 9.2705e-05 lowCoverage 1.0000e+00 5.1957e-03 lowCoverage -3.4206e-01 4.1898e-04 lowCoverage 0.0322292 lowCoverage chr12 52906950 52907950 41625 SMUG1 ENSG00000123415 0.8875000 79 5 0.8550000 30 3 0.7142857 22 3 0.9142857 17 2 0.8492063 20 3 0.8455615 120 5 1.0000000 20 3 0.8500000 22 1 0.8000000 20 3 0.6000000 27 3 0.8963889 63 5 0.8333333 12 0 0.9000000 22 3 NA 0 0 0.9314286 20 3 0.7333333 15 3 0.8000000 14 0 0.8784848 55 5 0.8000000 23 3 0.846667 84 5 0.600000 13 0 0.8000000 8 0 0.8750000 41 5 0.9027778 21 3 1.0000000 20 3 0.8777778 30 3 0.8000000 10 0 0.874286 20 3 0.80000000 28 3 0.9133333 42 5 0.9500000 36 5 0.814154 108 5 0.8309524 37 5 0.70000000 26 3 0.5000000 4 0 0.70000000 7 0 0.783333 27 3 0.7380952 25 3 0.6876190 33 5 0.9046154 89 5 0.9000000 33 3 0.80857143 52 5 0.9000000 36 5 1.0000000 0.9226562 0.95089286 1.0000000 0.8489583 0.9632353 1.0000000 0.9218750 1.0000000 1.0000000 0.9611545 0.8359375 1.0000000 NA 0.8821429 0.7437500 1.0000000 0.9343750 1.0000000 0.967187 0.8854167 1.0000000 1.000000 0.9049479 1.0000e+00 0.9618056 1.0000000 0.790179 1.0000000 0.9687500 1.0000000 0.9268544 0.9140625 1.0000000 NA 0.84375000 0.8906250 0.8936012 0.7470238 0.9735577 1.00000000 0.8794643 1.0000000 0 0.8788321 0.8594164 0.00526369 4 0.851147 0.845861 0.00528649 0.57065815 5.0896e-01 lowCoverage 1.000000 1.0000000 lowCoverage 0.89370522 2.4882e-01 lowCoverage 1.00000 1.000000 lowCoverage -0.0119016 0.7409443 lowCoverage 1 lowCoverage 0.8788321 0.8253968 5.4241e-02 2 0.851147 0.7879613 0.0631862 2.2705e-02 9.5978e-01 lowCoverage 2.3390e-01 1.0000e+00 lowCoverage 1.3388e-01 9.4944e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.12997905 3.7600e-02 lowCoverage 7.0379e-01 lowCoverage 0.878832 0.8888889 0.0069160 4 0.851147 0.8482113 0.00293612 4.1042e-01 7.6621e-01 lowCoverage 1.00000000 1.0000e+00 lowCoverage 3.8868e-01 8.8840e-01 lowCoverage 1.000000 1.0000e+00 lowCoverage -1.4520e-03 0.9762504 lowCoverage 1.00000 lowCoverage 0.8594164 0.8253968 0.05032582 2 0.845861 0.7879613 0.05789969 1.2690e-01 9.8732e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.6638e-02 9.9649e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.1418806 2.9490e-02 lowCoverage 5.6094e-01 lowCoverage 0.8594164 0.8888889 0.00073944 5 0.845861 0.8482113 -0.0023504 3.1473e-01 6.6507e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.0519e-01 9.5004e-01 insignificant 1.000000 1.000000 insignificant 0.0104496 0.8436348 lowCoverage 1.00000 lowCoverage 0.8253968 0.8888889 -0.04671012 2 0.7879613 0.8482113 -0.0602501 8.7647e-01 1.6949e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.4537e-01 2.4309e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -1.3143e-01 6.6021e-02 lowCoverage 0.9853807 lowCoverage chr12 53048250 53049250 41637 GPR84 ENSG00000139572 0.2173295 92 3 0.1757979 126 8 0.1453125 97 6 0.2004464 91 3 0.0893088 171 7 0.6542023 143 4 0.0581241 166 7 0.0936090 127 7 0.0796875 46 3 0.1051136 29 2 0.1946181 220 7 0.0142857 36 2 0.1607143 25 2 0.0791667 40 2 0.0694444 22 1 0.0782828 32 2 1.0000000 52 2 0.3217469 45 3 0.5794872 28 3 0.613477 90 3 0.140741 82 8 0.1214286 17 2 0.1009615 35 2 0.2642857 56 7 0.2506210 204 3 0.1625940 93 7 0.1400285 73 3 0.305556 26 3 0.34166667 28 2 0.1844907 90 3 0.2871190 144 8 0.190336 76 3 0.0749592 78 3 0.35000000 45 3 0.1250000 115 7 0.00000000 101 3 0.209091 84 7 0.1406250 96 7 0.3076039 147 3 0.2745308 137 7 0.2896659 188 3 0.90000000 10 2 0.1326389 137 7 0.2436869 0.1257683 0.07638889 0.2718254 0.0854328 0.5470764 0.1169607 0.2073099 0.1263889 0.0505051 0.1773148 0.0555556 0.2698413 0.1851852 0.1805556 0.2491582 0.7075781 0.2636166 0.2393162 0.306252 0.1111111 0.1450065 0.226496 0.1349206 1.4180e-01 0.2986633 0.0904558 0.111111 0.3611111 0.0981481 0.3425527 0.1727358 0.0766158 0.0444444 0.00000000 0.00000000 0.0555556 0.0138889 0.4365574 0.3941248 0.40335821 0.6534290 0.2833333 2 0.2326969 0.1807359 0.05401258 3 0.218355 0.262662 -0.04430749 0.87738570 9.1842e-01 lowCoverage 1.000000 1.0000000 lowCoverage 0.99633454 8.4987e-01 lowCoverage 1.00000 1.000000 lowCoverage 0.0390220 0.5385441 lowCoverage 1 lowCoverage 0.2323775 0.0443160 1.6562e-01 7 0.190190 0.1834061 0.0067840 3.3288e-02 9.9716e-01 weaklyHypermeth 3.2319e-01 1.0000e+00 insignificant 4.6601e-02 9.8283e-01 weaklyHypermeth 6.0520e-01 1.0000e+00 insignificant 0.09656188 2.1999e-01 lowCoverage 1.0000e+00 lowCoverage 0.232795 0.4022617 -0.1056056 3 0.229841 0.2589712 -0.02913030 9.9363e-01 6.4475e-02 lowCoverage 1.00000000 1.0000e+00 lowCoverage 9.9980e-01 5.8607e-03 lowCoverage 1.000000 7.0657e-01 lowCoverage -1.3438e-01 0.3938288 lowCoverage 1.00000 lowCoverage 0.1798483 0.0443160 0.12441485 3 0.188928 0.1834061 0.00552228 1.0468e-02 9.9841e-01 lowCoverage 1.2766e-01 1.0000e+00 lowCoverage 4.0731e-02 9.9807e-01 lowCoverage 5.9899e-01 1.0000e+00 lowCoverage 0.0575398 3.2249e-01 lowCoverage 1.0000e+00 lowCoverage 0.1807229 0.4022617 -0.16705616 3 0.276587 0.2589712 0.0176159 9.9999e-01 4.9515e-04 lowCoverage 1.0000e+00 1.2379e-01 lowCoverage 9.9952e-01 9.8227e-03 lowCoverage 1.000000 1.000000 lowCoverage -0.1734022 0.2658905 lowCoverage 1.00000 lowCoverage 0.0425532 0.4029126 -0.28295293 3 0.1042577 0.2913426 -0.1870850 1.0000e+00 1.6417e-09 lowCoverage 1.0000e+00 9.1207e-08 lowCoverage 1.0000e+00 2.1614e-03 lowCoverage 1.0000e+00 5.6956e-02 lowCoverage -2.3094e-01 1.6431e-01 lowCoverage 1.0000000 lowCoverage chr12 53049950 53050950 41638 GPR84 ENSG00000139572 0.1047700 640 25 0.0956439 930 24 0.1019247 1300 29 0.1093494 372 17 0.0912173 1122 25 0.1797958 952 25 0.0599679 1355 29 0.1030227 895 29 0.0777383 1217 26 0.1045531 1379 25 0.0682493 1299 25 0.0795960 1164 25 0.0625192 1080 25 0.0753434 563 13 0.0564191 1436 25 0.0206426 1163 25 0.1226477 601 19 0.1469224 671 20 0.0898555 1291 25 0.180385 964 25 0.067727 580 25 0.0775757 480 17 0.1775956 713 25 0.0948880 543 28 0.0704001 419 14 0.0417382 1410 25 0.0997371 954 25 0.119108 760 27 0.03672620 980 25 0.1274768 1434 25 0.0673415 1313 26 0.205818 943 25 0.0154860 910 27 0.00871251 826 25 0.0682895 761 21 0.04444444 194 15 0.159943 637 28 0.0462395 1118 25 0.1687581 744 24 0.1838614 686 25 0.0925306 450 19 0.10343428 526 21 0.2123279 471 20 0.0230238 0.0307123 0.02834963 0.0261956 0.0220933 0.0554231 0.0350478 0.0277889 0.0281064 0.0158665 0.0392394 0.0285414 0.0217663 0.0264716 0.0259515 0.0192374 0.0356528 0.0282923 0.0265183 0.032642 0.0388025 0.0334024 0.053031 0.0428850 1.8033e-02 0.0180176 0.0347847 0.024840 0.0162768 0.0190231 0.0260611 0.0407305 0.0194218 0.0071117 0.01093231 0.01647461 0.0307388 0.0059546 0.0648358 0.0738974 0.04352048 0.0506780 0.0601624 16 0.0481703 0.0493065 -0.00370401 25 0.159854 0.164048 -0.00419415 0.56762040 7.2125e-01 insignificant 1.000000 1.0000000 insignificant 0.62018492 7.5344e-01 insignificant 1.00000 1.000000 insignificant -0.0023163 0.8948317 insignificant 1 insignificant 0.0481869 0.0195726 3.0194e-02 25 0.167289 0.1123338 0.0549555 1.2852e-09 9.9985e-01 weaklyHypermeth 4.1458e-08 1.0000e+00 weaklyHypermeth 1.7886e-07 9.9999e-01 weaklyHypermeth 1.0222e-05 1.0000e+00 weaklyHypermeth 0.03934233 1.4855e-01 insignificant 1.0000e+00 insignificant 0.047661 0.0768161 -0.0384783 23 0.125229 0.2207721 -0.09554349 9.7257e-01 1.9592e-33 weaklyHypometh 1.00000000 1.9592e-30 weaklyHypometh 9.6344e-01 1.1261e-08 weaklyHypometh 1.000000 1.1261e-05 weaklyHypometh -5.5654e-02 0.0734080 insignificant 1.00000 insignificant 0.0491398 0.0195682 0.03458989 25 0.162095 0.1097808 0.05231414 2.1202e-06 9.9934e-01 weaklyHypermeth 5.2041e-05 1.0000e+00 weaklyHypermeth 2.1046e-04 1.0000e+00 weaklyHypermeth 6.3775e-03 1.0000e+00 weaklyHypermeth 0.0416586 1.5387e-01 insignificant 1.0000e+00 insignificant 0.0485807 0.0768161 -0.03672233 23 0.125184 0.2207721 -0.0955881 9.9974e-01 1.5197e-12 weaklyHypometh 1.0000e+00 1.5197e-09 weaklyHypometh 9.9996e-01 4.5079e-05 weaklyHypometh 1.000000 0.045079 weaklyHypometh -0.0533380 0.0920887 insignificant 1.00000 insignificant 0.0195990 0.0768161 -0.05474987 23 0.1238552 0.2207721 -0.0969169 1.0000e+00 5.0214e-16 weaklyHypometh 1.0000e+00 1.6738e-13 weaklyHypometh 1.0000e+00 3.2942e-06 weaklyHypometh 1.0000e+00 4.7060e-04 weaklyHypometh -9.4997e-02 1.6851e-02 weaklyHypometh 0.4011464 insignificant chr12 53052250 53053250 41639 GPR84 ENSG00000139572 0.7520696 101 5 0.7404603 484 5 0.7480000 111 4 0.6887634 119 4 0.8245455 85 4 0.8199797 321 5 0.8471187 147 5 0.7968168 139 5 0.7913756 114 5 0.7935979 57 4 0.8260732 231 5 0.6825641 32 2 0.8450951 91 5 0.7706456 78 3 0.9012483 127 5 0.6404762 31 3 1.0000000 5 0 0.7808644 100 4 0.8423988 252 5 0.822261 237 5 0.708752 115 5 0.7517444 79 5 0.7594396 113 5 0.6658112 121 5 0.7928571 34 3 0.8702535 329 5 0.6982112 131 5 0.754589 95 5 0.73527422 203 5 0.8767865 431 5 0.8652778 404 5 0.844883 200 5 0.4399800 195 5 0.44466667 74 2 0.3008406 301 5 0.86666667 12 1 0.414718 416 5 0.6675901 262 5 0.7835008 128 5 0.7032430 122 5 0.7642835 89 5 0.56296296 44 3 0.8319853 81 4 0.8015031 0.7893041 0.74498084 0.8132508 0.8003918 0.8625408 0.8155833 0.8201684 0.8531421 0.8407803 0.7996212 0.8083112 0.9019035 0.7942339 0.8832554 0.8238426 0.8935404 0.7879206 0.9148892 0.888791 0.7302784 0.7491548 0.811957 0.8909233 7.4946e-01 0.8691883 0.7231234 0.805998 0.8902409 0.8888154 0.8903137 0.8648263 0.2314230 0.2560920 0.24658120 0.95114943 0.3485608 0.6030215 0.8097797 0.6776629 0.83065042 0.6170711 0.7635755 2 0.8301887 0.8416851 -0.01483257 5 0.834925 0.674777 0.16014838 0.85035682 5.1743e-01 insignificant 1.000000 1.0000000 insignificant 0.59462020 8.3048e-01 insignificant 1.00000 1.000000 insignificant 0.0187278 0.5009528 lowCoverage 1 lowCoverage 0.8300105 0.3984127 4.3963e-01 5 0.801910 0.4447526 0.3571574 1.8247e-24 1.0000e+00 hypermethylated 2.2809e-22 1.0000e+00 hypermethylated 4.6615e-04 9.9761e-01 hypermethylated 1.1953e-02 1.0000e+00 hypermethylated 0.27330744 2.1950e-02 lowCoverage 4.6702e-01 lowCoverage 0.830010 0.7844828 0.0476996 5 0.801910 0.7547824 0.04712764 2.1635e-02 5.3271e-01 weaklyHypermeth 0.77266814 1.0000e+00 insignificant 7.9037e-02 2.3861e-01 insignificant 1.000000 1.0000e+00 insignificant 6.6523e-02 0.2357405 lowCoverage 1.00000 lowCoverage 0.8424323 0.3984127 0.45755382 5 0.809732 0.4447526 0.36497937 4.6397e-17 1.0000e+00 hypermethylated 3.8664e-15 1.0000e+00 hypermethylated 5.7933e-04 9.9984e-01 hypermethylated 1.4130e-02 1.0000e+00 hypermethylated 0.2545797 2.8302e-02 lowCoverage 5.5494e-01 lowCoverage 0.8424323 0.7844828 0.06413123 5 0.809732 0.7547824 0.0549496 1.1549e-02 1.9726e-01 weaklyHypermeth 5.4997e-01 1.0000e+00 insignificant 1.5476e-01 3.9308e-01 insignificant 1.000000 1.000000 insignificant 0.0477948 0.3856935 lowCoverage 1.00000 lowCoverage 0.3984127 0.7844828 -0.37726654 5 0.4447526 0.7547824 -0.3100298 9.9930e-01 1.4788e-07 hypomethylated 1.0000e+00 5.4769e-06 hypomethylated 9.6750e-01 9.7371e-03 weaklyHypometh 1.0000e+00 1.9872e-01 insignificant -2.0678e-01 6.5555e-02 lowCoverage 0.9853807 lowCoverage chr12 54528450 54529450 41663 MMP19 ENSG00000123342 0.7751131 104 5 0.7820952 137 5 0.6971564 114 5 0.7407895 61 3 0.8733333 43 5 0.7916536 220 5 0.7522838 112 5 0.7872727 63 5 0.6309722 96 5 0.8525000 94 5 0.7445716 176 5 0.5589286 47 5 0.7750700 113 5 NA 0 0 0.7831305 87 5 0.6888889 63 5 0.7036752 93 5 0.8023529 56 3 0.7959766 132 5 0.761427 211 5 0.760606 35 5 0.5138889 27 3 0.8163636 73 5 0.6804248 53 5 0.5222222 28 3 0.8271078 92 5 0.8714286 43 5 0.780280 44 5 0.64709045 95 5 0.7701389 100 5 0.8143373 116 5 0.790388 236 5 0.4549953 89 5 0.38289683 109 5 0.6575397 125 5 0.74685315 41 3 0.761029 51 3 0.5126984 118 5 0.8057941 106 5 0.7697933 117 5 0.8519192 69 5 0.83333333 77 4 0.7729893 78 3 0.6789620 0.7384580 0.62952050 0.7091165 0.8186508 0.7232505 0.7164872 0.7542208 0.5805762 0.7901786 0.7263373 0.5204613 0.7137939 NA 0.7679316 0.6507937 0.6415980 0.6866947 0.7602005 0.695443 0.7025613 0.6175520 0.825162 0.6443900 5.1059e-01 0.7600957 0.8014456 0.734199 0.6188170 0.7125289 0.7707649 0.7585250 0.4767977 0.3946229 0.72821003 0.63690476 0.6722767 0.4831349 0.7308530 0.6460463 0.81022727 0.7644300 0.6508060 3 0.7349159 0.7537155 -0.01923046 5 0.760966 0.776030 -0.01506473 0.89435143 2.2491e-01 insignificant 1.000000 1.0000000 insignificant 0.79746549 2.5765e-01 insignificant 1.00000 1.000000 insignificant 0.0196274 0.6109716 lowCoverage 1 lowCoverage 0.7349159 0.5159475 2.2208e-01 5 0.760966 0.5245329 0.2364328 2.8794e-12 9.9413e-01 hypermethylated 1.1075e-10 1.0000e+00 hypermethylated 3.2077e-02 9.6712e-01 weaklyHypermeth 4.6488e-01 1.0000e+00 insignificant 0.16648161 4.9177e-02 lowCoverage 8.4788e-01 lowCoverage 0.734916 0.7181208 -0.0042255 5 0.760966 0.7987759 -0.03781026 6.4506e-01 5.6807e-04 weaklyHypometh 1.00000000 9.4678e-02 weaklyHypometh 8.7044e-01 2.9178e-03 weaklyHypometh 1.000000 5.8355e-01 insignificant -5.4282e-02 0.0359709 lowCoverage 1.00000 lowCoverage 0.7537155 0.5159475 0.22871901 5 0.776030 0.5245329 0.25149751 2.6762e-08 9.9489e-01 hypermethylated 9.5577e-07 1.0000e+00 hypermethylated 3.1578e-02 9.5365e-01 weaklyHypermeth 4.9341e-01 1.0000e+00 insignificant 0.1468542 7.9744e-02 lowCoverage 1.0000e+00 lowCoverage 0.7537155 0.7181208 0.01975764 5 0.776030 0.7987759 -0.0227455 5.4944e-01 1.8252e-02 inconclusive 1.0000e+00 1.0000e+00 insignificant 8.7130e-01 2.8995e-02 inconclusive 1.000000 1.000000 insignificant -0.0739095 0.0686931 lowCoverage 1.00000 lowCoverage 0.5159475 0.7181208 -0.15674054 5 0.5245329 0.7987759 -0.2742430 9.9664e-01 7.9371e-08 weaklyHypometh 1.0000e+00 3.3071e-06 weaklyHypometh 9.9960e-01 1.9155e-03 weaklyHypometh 1.0000e+00 5.5822e-02 weaklyHypometh -2.2076e-01 1.7806e-02 lowCoverage 0.4011464 lowCoverage chr12 54694350 54695350 41669 SUOX ENSG00000139531 0.6540769 190 5 0.6800936 151 5 0.7466763 81 5 0.6951618 180 5 0.6833013 64 5 0.6415283 820 5 0.7287618 159 5 0.7100761 124 5 0.6065754 128 5 0.5250541 100 5 0.7127813 178 5 0.7584712 65 5 0.6953913 166 5 1.0000000 10 1 0.7183989 116 5 0.7035936 62 5 0.6631652 89 5 0.6965552 136 5 0.6497475 163 5 0.645377 567 5 0.631648 160 5 0.5884336 224 5 0.7616737 130 5 0.4426297 423 5 0.5762271 254 5 0.6005461 150 5 0.4997828 541 5 0.535736 232 5 0.56886973 139 5 0.6344986 167 5 0.6767636 203 5 0.734671 505 5 0.5094017 118 5 0.60055315 129 5 0.6677970 190 5 0.52150960 282 5 0.519180 279 5 0.6214402 184 5 0.6852597 221 5 0.7874753 241 5 0.7878054 146 5 0.70143092 155 5 0.8138095 92 5 0.6424246 0.6815790 0.73373875 0.6942203 0.6926257 0.6436538 0.7311016 0.7103876 0.6010912 0.5380226 0.7145857 0.7453965 0.7024241 NA 0.7247226 0.6836344 0.6544374 0.7071321 0.6547882 0.642768 0.6337905 0.5973710 0.761162 0.4772904 5.6994e-01 0.6003458 0.5105641 0.565416 0.5797975 0.6368152 0.6742037 0.7361367 0.5064044 0.6022762 0.67804118 0.52167743 0.5430417 0.6221795 0.6906012 0.7800185 0.79079655 0.7004625 0.8154270 5 0.6832911 0.5885550 0.07041214 5 0.666532 0.589121 0.07741058 0.00012112 9.3645e-01 weaklyHypermeth 0.060558 1.0000000 weaklyHypermeth 0.00059757 8.9703e-01 weaklyHypermeth 0.55046 1.000000 insignificant 0.0914493 0.0111570 lowCoverage 1 lowCoverage 0.6832911 0.5651438 9.6321e-02 5 0.666532 0.5645962 0.1019356 5.1939e-07 9.9999e-01 weaklyHypermeth 1.1804e-05 1.0000e+00 weaklyHypermeth 4.3575e-05 9.9999e-01 weaklyHypermeth 1.4383e-03 1.0000e+00 weaklyHypermeth 0.12242567 3.6904e-03 lowCoverage 1.0657e-01 lowCoverage 0.683291 0.7684211 -0.0793500 5 0.666532 0.7490030 -0.08247124 9.9914e-01 3.6922e-04 weaklyHypometh 1.00000000 7.3843e-02 weaklyHypometh 9.9860e-01 4.2089e-03 weaklyHypometh 1.000000 7.0149e-01 insignificant -5.9417e-02 0.0996467 lowCoverage 1.00000 lowCoverage 0.5885550 0.5651438 0.02218524 5 0.589121 0.5645962 0.02452500 1.4351e-03 8.9000e-01 weaklyHypermeth 2.3243e-02 1.0000e+00 weaklyHypermeth 1.3743e-02 9.1377e-01 weaklyHypermeth 2.4111e-01 1.0000e+00 insignificant 0.0309764 4.2610e-01 insignificant 1.0000e+00 insignificant 0.5885550 0.7684211 -0.14561805 5 0.589121 0.7490030 -0.1598818 9.9994e-01 9.2307e-06 weaklyHypometh 1.0000e+00 4.6154e-03 weaklyHypometh 9.9958e-01 1.5446e-04 weaklyHypometh 1.000000 0.077231 weaklyHypometh -0.1508661 0.0015258 weaklyHypometh 0.38146 insignificant 0.5651438 0.7684211 -0.17600381 5 0.5645962 0.7490030 -0.1844068 1.0000e+00 2.7558e-07 weaklyHypometh 1.0000e+00 9.5027e-06 weaklyHypometh 1.0000e+00 6.5818e-06 weaklyHypometh 1.0000e+00 8.2272e-04 weaklyHypometh -1.8184e-01 8.8497e-04 weaklyHypometh 0.0553103 weaklyHypometh chr12 55348550 55349550 41679 ATP5B ENSG00000110955 0.6480304 660 12 0.7687401 284 12 0.6860579 309 15 0.6449821 447 12 0.5517316 559 16 0.7754730 249 8 0.5335948 477 14 0.6483883 461 13 0.4851195 445 12 0.6454648 418 13 0.5820480 742 13 0.5733852 311 16 0.5917755 550 16 0.6200466 173 12 0.5518264 433 14 0.5783492 310 12 0.5940832 260 11 0.6402214 519 12 0.6651520 604 13 0.618143 216 11 0.399381 122 7 0.7895781 97 6 0.5919602 485 12 0.4895098 156 10 0.6268746 172 8 0.7166872 579 15 0.6855876 90 11 0.659709 111 7 0.63501406 638 15 0.6968680 566 15 0.6066342 612 15 0.562165 249 11 0.6376777 260 14 0.65054814 399 13 0.5585763 205 11 0.71577381 49 6 0.514905 318 14 0.5787019 632 15 0.6998133 632 15 0.7213839 700 15 0.7555473 526 12 0.59997305 637 12 0.7251124 520 15 0.7494830 0.7103381 0.64445570 0.7067099 0.6118377 0.6727457 0.6284891 0.6767087 0.6141960 0.6583588 0.6665305 0.6231172 0.6781723 0.7318155 0.6520545 0.5672477 0.5914648 0.6951953 0.6791333 0.688043 0.5032194 0.7764205 0.670441 0.6345548 7.0572e-01 0.6967245 0.6391331 0.653048 0.6353909 0.7360646 0.6968728 0.6901327 0.6767395 0.6666576 0.67057461 0.75323466 0.6045447 0.6460359 0.7313534 0.7106911 0.71773648 0.7194397 0.7262285 4 0.6211726 0.6711375 -0.01464540 15 0.609999 0.629580 -0.01958088 0.29085600 2.7899e-02 weaklyHypometh 1.000000 1.0000000 insignificant 0.10254733 6.6887e-01 insignificant 1.00000 1.000000 insignificant -0.0015334 0.9647190 insignificant 1 insignificant 0.6211726 0.6247987 3.3582e-02 13 0.609999 0.5490970 0.0609017 2.0594e-04 9.8254e-01 weaklyHypermeth 3.4905e-03 1.0000e+00 weaklyHypermeth 4.3136e-02 9.5361e-01 weaklyHypermeth 5.7515e-01 1.0000e+00 insignificant 0.01076682 7.5705e-01 insignificant 1.0000e+00 insignificant 0.621173 0.6998342 -0.0574856 14 0.609999 0.6444699 -0.03447124 9.6255e-01 1.0294e-03 weaklyHypometh 1.00000000 1.2868e-01 insignificant 9.7325e-01 2.1654e-02 weaklyHypometh 1.000000 1.0000e+00 insignificant -8.0235e-02 0.0354143 weaklyHypometh 1.00000 insignificant 0.6711375 0.6247987 0.04569265 13 0.629580 0.5490970 0.08048255 5.0622e-03 9.9895e-01 weaklyHypermeth 7.0308e-02 1.0000e+00 weaklyHypermeth 3.8799e-01 8.8348e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0123002 7.7527e-01 insignificant 1.0000e+00 insignificant 0.6711375 0.6998342 -0.04691351 14 0.629580 0.6444699 -0.0148904 9.7938e-01 1.3506e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9853e-01 4.5049e-03 weaklyHypometh 1.000000 1.000000 insignificant -0.0787020 0.0722343 insignificant 1.00000 insignificant 0.6247987 0.6998342 -0.08672862 12 0.5490970 0.6444699 -0.0953729 1.0000e+00 2.4068e-06 weaklyHypometh 1.0000e+00 7.5214e-05 weaklyHypometh 1.0000e+00 6.5265e-03 weaklyHypometh 1.0000e+00 1.5178e-01 insignificant -9.1002e-02 4.8068e-02 weaklyHypometh 0.8405479 insignificant chr12 55608950 55609950 41686 ENSG00000212383 0.8757026 301 5 0.7917213 258 5 0.8292232 89 5 0.8586573 254 5 0.8885714 59 5 0.8899641 331 5 0.8475189 124 5 0.8742579 143 5 0.8862745 81 5 0.9017316 55 5 0.9165030 170 5 1.0000000 13 2 0.9525000 80 5 0.8790909 57 4 0.8813675 98 5 0.9333333 28 5 1.0000000 4 0 0.8426392 516 5 0.8657557 168 5 0.818376 243 5 0.938462 56 4 0.8390476 36 5 0.8649522 106 5 0.8431452 84 5 0.9342857 190 5 0.7940889 190 5 0.7690476 74 5 0.734016 83 5 0.88916160 213 5 0.9218372 180 5 0.8702677 189 5 0.914451 233 5 0.6061068 168 5 0.49377672 131 5 0.4766860 206 5 0.72666667 220 4 0.468121 167 5 0.7258568 193 5 0.7715443 254 5 0.7803329 219 4 0.6867897 306 5 0.81663768 237 4 0.7463941 190 5 0.8901586 0.7537397 0.84175686 0.8342535 0.9110553 0.8741626 0.8372730 0.8850118 0.8870825 0.8877831 0.9246437 1.0000000 0.9456658 0.8646642 0.8946876 0.9145729 0.9034141 0.8359256 0.8821969 0.812003 0.9211442 0.8045226 0.869548 0.8116490 9.1579e-01 0.7702757 0.8141062 0.901187 0.8688587 0.9199704 0.8791299 0.9182231 0.6477410 0.5345912 0.50452806 0.73685092 0.5757702 0.7549985 0.7479348 0.7326418 0.65426980 0.7963950 0.7238432 3 0.8551432 0.8756889 -0.01924378 5 0.861037 0.875789 -0.01475241 0.91345872 1.2100e-01 insignificant 1.000000 1.0000000 insignificant 0.78325850 5.8285e-01 insignificant 1.00000 1.000000 insignificant 0.0272626 0.2435829 lowCoverage 1 lowCoverage 0.8551432 0.6208487 2.3998e-01 5 0.861037 0.6058180 0.2552186 3.0363e-22 8.4995e-01 hypermethylated 2.7603e-20 1.0000e+00 hypermethylated 1.3013e-07 9.9619e-01 hypermethylated 8.6751e-06 1.0000e+00 hypermethylated 0.30379050 1.2970e-03 lowCoverage 4.8036e-02 lowCoverage 0.855143 0.7155887 0.1278522 5 0.861037 0.7536532 0.10738348 4.5280e-08 9.9917e-01 weaklyHypermeth 0.00002264 1.0000e+00 weaklyHypermeth 2.7616e-05 9.9912e-01 weaklyHypermeth 0.016863 1.0000e+00 weaklyHypermeth 1.2632e-01 0.0015356 lowCoverage 0.30712 lowCoverage 0.8751530 0.6202765 0.28093069 5 0.729824 0.5048484 0.22497585 2.4897e-15 9.9812e-01 hypermethylated 1.6598e-13 1.0000e+00 hypermethylated 2.4944e-05 9.9964e-01 hypermethylated 1.0393e-03 1.0000e+00 hypermethylated 0.2765279 1.5615e-03 lowCoverage 5.5766e-02 lowCoverage 0.8756889 0.7155887 0.14384260 5 0.875789 0.7536532 0.1221359 4.6061e-07 9.9918e-01 weaklyHypermeth 1.5354e-04 1.0000e+00 weaklyHypermeth 3.5816e-05 9.9960e-01 weaklyHypermeth 0.017908 1.000000 weaklyHypermeth 0.0990571 0.0060226 lowCoverage 0.86037 lowCoverage 0.6208487 0.7155887 -0.11109443 5 0.6058180 0.7536532 -0.1478351 2.3382e-02 5.4550e-08 weaklyHypometh 1.0000e+00 2.3717e-06 weaklyHypometh 1.4342e-01 6.2118e-04 weaklyHypometh 1.0000e+00 2.3007e-02 weaklyHypometh -1.7747e-01 1.4227e-02 lowCoverage 0.3556818 lowCoverage chr12 55806050 55807050 41697 STAT6 ENSG00000166888 0.8119048 64 6 0.6582265 76 4 0.6150794 45 4 0.8932179 91 6 0.6094697 52 4 0.7499150 82 7 0.7142857 22 1 0.7108974 103 7 0.6375661 42 4 0.6666667 21 0 0.8215832 144 7 0.8750000 9 1 0.7240741 72 7 0.7195767 37 1 0.7142857 38 4 0.7500000 6 0 0.7500000 32 1 0.8345238 35 5 0.6498677 49 7 0.908163 44 7 0.645833 26 3 1.0000000 3 0 0.6230159 41 6 0.7761905 33 4 0.7771242 58 3 0.7890421 149 7 0.7944444 36 4 0.733333 16 1 0.75275510 70 7 0.7523866 105 7 0.7798392 109 7 0.831933 93 7 0.7645967 97 7 0.62289562 104 6 0.6952381 65 4 0.71428571 28 3 0.814626 66 5 0.8374919 134 7 0.8484848 60 7 0.8477621 134 7 0.7182008 80 7 0.76666667 24 1 0.8675109 77 6 0.8545752 0.7365196 0.60504202 0.9603882 0.7332145 0.8033964 0.6960784 0.8229505 0.7319094 0.6666667 0.8479225 0.8401514 0.8107843 0.7677404 0.7908497 0.7247257 0.8913924 0.9241830 0.7505836 0.920635 0.7287582 0.8407025 0.716776 0.8483660 7.8643e-01 0.8450440 0.7993464 0.804396 0.8259384 0.8119954 0.8054495 0.9065744 0.7951138 0.6662210 0.72712418 0.85294118 0.8468721 0.8762183 0.8924540 0.9054251 0.75296729 0.8156863 0.8702743 0 0.7525870 0.8200271 -0.01538670 7 0.709015 0.721271 -0.01225595 0.94049495 4.4341e-01 insignificant 1.000000 1.0000000 insignificant 0.82985308 6.8285e-01 insignificant 1.00000 1.000000 insignificant -0.0306096 0.3756341 lowCoverage 1 lowCoverage 0.7528195 0.7975709 8.2582e-03 7 0.738113 0.7803361 -0.0422228 8.2096e-01 6.3472e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.3244e-01 7.7972e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00080714 9.8372e-01 lowCoverage 1.0000e+00 lowCoverage 0.756938 0.8373333 -0.0374030 7 0.768733 0.8056902 -0.03695678 9.3983e-01 3.3636e-01 insignificant 1.00000000 1.0000e+00 insignificant 9.4220e-01 3.6077e-01 insignificant 1.000000 1.0000e+00 insignificant -6.9010e-02 0.0832954 lowCoverage 1.00000 lowCoverage 0.8200271 0.7971602 0.01742790 7 0.721271 0.7559291 -0.03465826 5.2361e-01 7.8077e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.8122e-01 8.2106e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0298025 4.9632e-01 lowCoverage 1.0000e+00 lowCoverage 0.8235294 0.8373333 -0.01311652 7 0.784491 0.8056902 -0.0211991 7.2064e-01 6.2002e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.5773e-01 5.5153e-01 insignificant 1.000000 1.000000 insignificant -0.0384003 0.3516087 lowCoverage 1.00000 lowCoverage 0.7979592 0.8373333 -0.03201638 7 0.7576231 0.8056902 -0.0480671 7.5910e-01 1.9494e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3242e-01 3.8522e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -6.8203e-02 1.5154e-01 insignificant 1.0000000 insignificant chr12 56444950 56445950 41720 MARCH9 ENSG00000139266 0.1188154 1237 16 0.0642279 817 18 0.1012696 700 18 0.0479303 855 16 0.0671330 858 18 0.1055099 1230 18 0.0255776 895 18 0.0126033 669 18 0.0177528 856 18 0.1032137 1065 18 0.0182046 826 18 0.0289154 459 16 0.0227919 549 16 0.0136876 479 14 0.0045349 945 18 0.0136931 521 16 0.1701031 142 5 0.0653202 2154 16 0.0288089 1099 17 0.075521 909 18 0.097757 643 18 0.0288462 289 10 0.0701893 712 18 0.0242986 364 18 0.0434783 345 16 0.0130179 997 18 0.0445669 938 18 0.033265 332 18 0.00951831 839 16 0.1134615 1117 18 0.0582441 1177 18 0.069406 1053 18 0.0274658 620 18 0.00045249 903 16 0.0787564 917 17 0.07692308 107 9 0.106755 480 18 0.0266562 1170 18 0.0915896 1169 16 0.1224135 984 17 0.0310799 977 17 0.12466029 1945 14 0.0572703 828 16 0.0254860 0.0133511 0.07334287 0.0081704 0.0154583 0.0244788 0.0157011 0.0083301 0.0160565 0.0099411 0.0164107 0.0131612 0.0185998 0.0183584 0.0075715 0.0240236 0.0123180 0.0115909 0.0206266 0.030904 0.0133109 0.0146512 0.030056 0.0150023 0.0000e+00 0.0112188 0.0263486 0.013244 0.0096996 0.0134317 0.0125838 0.0217030 0.0282598 0.0010279 0.07328387 0.00084565 0.0460244 0.0283910 0.0169486 0.0132444 0.02266008 0.0219943 0.0156392 14 0.0213789 0.0188572 0.00343070 18 0.102216 0.060041 0.04217443 0.19309763 9.9973e-01 insignificant 1.000000 1.0000000 insignificant 0.34828392 9.9977e-01 insignificant 1.00000 1.000000 insignificant 0.0047766 0.7317722 insignificant 1 insignificant 0.0213432 0.0317120 -8.5375e-03 17 0.115177 0.1040156 0.0111619 5.7024e-04 8.0204e-01 inconclusive 8.5110e-03 1.0000e+00 inconclusive 1.0488e-02 9.9960e-01 inconclusive 1.7481e-01 1.0000e+00 insignificant 0.00244586 9.0247e-01 insignificant 1.0000e+00 insignificant 0.021340 0.0181294 0.0015716 16 0.106318 0.0759551 0.03036257 4.5078e-01 9.1872e-01 insignificant 1.00000000 1.0000e+00 insignificant 8.3325e-01 9.8863e-01 insignificant 1.000000 1.0000e+00 insignificant -3.0122e-02 0.1947065 insignificant 1.00000 insignificant 0.0188227 0.0317044 -0.01207618 17 0.067920 0.0831823 -0.01526186 1.1266e-01 4.9482e-01 insignificant 9.4670e-01 1.0000e+00 insignificant 8.7782e-02 9.2378e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0023307 9.0547e-01 insignificant 1.0000e+00 insignificant 0.0188227 0.0181356 -0.00177631 16 0.067920 0.0822847 -0.0143643 9.1404e-01 5.5316e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8019e-01 7.3131e-01 insignificant 1.000000 1.000000 insignificant -0.0348986 0.1387156 insignificant 1.00000 insignificant 0.0314810 0.0181387 0.00970300 16 0.0650598 0.0858623 -0.0208025 9.0230e-01 4.6517e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9986e-01 4.0225e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -3.2568e-02 2.2092e-01 insignificant 1.0000000 insignificant chr12 56519150 56520150 41724 MIR26A2 ENSG00000207789 0.7800000 132 5 0.6026786 93 5 0.6208791 68 5 0.8095238 107 5 0.7638889 43 5 0.6736340 227 5 0.5408163 39 5 0.7900000 108 5 0.6533333 51 3 0.7454545 25 2 0.6748450 194 5 NA 0 0 0.8500000 50 5 0.7714286 36 5 0.7307692 43 3 0.4285714 19 0 0.3800000 12 1 0.5823254 102 5 0.6691403 129 5 0.666460 101 5 0.681667 32 3 0.8127273 38 3 0.6841026 77 5 0.5805556 48 3 0.8400000 21 3 0.7773350 143 5 0.5712551 56 5 0.558333 20 2 0.73464052 69 5 0.6783699 124 5 0.6671056 129 5 0.746945 194 5 0.6847885 102 5 0.48576203 66 5 0.4070739 119 5 0.60000000 5 0 0.687701 69 5 0.6436542 118 5 0.6789299 109 5 0.5705861 88 5 0.7083643 100 5 0.68050066 84 5 0.6947326 116 5 0.7633745 0.5298501 0.62515263 0.8036449 0.7709191 0.6492456 0.5802469 0.7868313 0.6502058 0.7194164 0.6669937 NA 0.8106996 0.7636684 0.7236467 0.5802469 0.3827160 0.6631130 0.6744667 0.671683 0.6818930 0.7613917 0.685533 0.6169410 8.0247e-01 0.6748913 0.5830959 0.571502 0.7200032 0.6572429 0.6621639 0.7562129 0.6627439 0.4816713 0.54579582 0.62962963 0.6572589 0.6372668 0.6688001 0.5825781 0.70392857 0.6777599 0.6654095 0 0.6966434 0.7024185 0.00087900 5 0.628530 0.781067 -0.15253631 0.85383238 5.1514e-01 insignificant 1.000000 1.0000000 insignificant 0.77159831 7.6086e-01 insignificant 1.00000 1.000000 insignificant -0.0242224 0.5415497 lowCoverage 1 lowCoverage 0.6966434 0.6158664 8.5957e-02 5 0.628530 0.4391704 0.1893599 1.6868e-03 9.9821e-01 weaklyHypermeth 2.2491e-02 1.0000e+00 weaklyHypermeth 6.7630e-02 9.9982e-01 insignificant 8.4538e-01 1.0000e+00 insignificant 0.08536743 1.5380e-01 lowCoverage 1.0000e+00 lowCoverage 0.697837 0.6720322 0.0256870 5 0.696609 0.6708911 0.02571804 3.1902e-01 8.9916e-01 insignificant 1.00000000 1.0000e+00 insignificant 2.0063e-01 9.4198e-01 insignificant 1.000000 1.0000e+00 insignificant 3.5746e-03 0.9257849 lowCoverage 1.00000 lowCoverage 0.7024185 0.6158664 0.08529979 5 0.781067 0.4391704 0.34189621 1.7264e-03 9.9988e-01 weaklyHypermeth 2.6907e-02 1.0000e+00 weaklyHypermeth 4.6522e-02 9.9968e-01 weaklyHypermeth 6.6040e-01 1.0000e+00 insignificant 0.1095898 7.4782e-02 lowCoverage 1.0000e+00 lowCoverage 0.7017914 0.6720322 0.02353125 5 0.693493 0.6708911 0.0226022 2.3080e-01 9.1973e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.5216e-01 8.8043e-01 insignificant 1.000000 1.000000 insignificant 0.0277970 0.4582642 lowCoverage 1.00000 lowCoverage 0.6184486 0.6720322 -0.05956940 5 0.6148386 0.6708911 -0.0560525 9.8373e-01 3.2789e-02 weaklyHypometh 1.0000e+00 3.9195e-01 insignificant 9.3708e-01 2.3661e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -8.1793e-02 1.6321e-01 lowCoverage 1.0000000 lowCoverage chr12 56533150 56534150 41725 CTDSP2 ENSG00000175215 0.1104043 355 8 0.0895336 337 9 0.2110442 330 9 0.2498457 215 8 0.0600363 261 9 0.2716087 461 9 0.2133865 370 9 0.1300853 287 9 0.2020643 351 9 0.0943449 261 9 0.2290544 393 9 0.2205496 262 8 0.0626573 300 9 0.2388889 82 4 0.0816862 388 9 0.1635117 343 9 0.0378862 245 6 0.1260570 204 8 0.1452489 317 8 0.095978 401 9 0.250703 233 8 0.1169743 148 8 0.1048561 247 8 0.0570659 160 9 0.2638945 139 8 0.0375812 399 9 0.1344452 369 9 0.170299 158 8 0.16711673 254 8 0.1181175 485 9 0.1632397 447 9 0.089521 536 9 0.3860396 260 9 0.54788628 242 8 0.5397026 287 7 0.27802680 86 5 0.543608 224 9 0.2498910 315 9 0.0615374 399 9 0.1172209 388 8 0.0830182 191 8 0.07205392 360 7 0.1630349 266 8 0.1590786 0.1123737 0.24081733 0.0875480 0.0791935 0.2517389 0.1809301 0.1538803 0.1709967 0.1547321 0.1991368 0.1767623 0.0825213 0.1933467 0.1138113 0.1367800 0.1449933 0.1728805 0.1394986 0.138295 0.1477126 0.1479120 0.139296 0.0733303 1.9932e-01 0.0625135 0.0753361 0.101667 0.1136033 0.0729577 0.0993963 0.1312197 0.4378557 0.5197999 0.74091371 0.36713120 0.5680349 0.3720941 0.0873813 0.1348103 0.09247010 0.0946831 0.1621031 6 0.1452686 0.1110490 0.04826355 9 0.190530 0.186474 0.00405542 0.00010462 9.8605e-01 weaklyHypermeth 0.060558 1.0000000 weaklyHypermeth 0.00110093 9.7486e-01 weaklyHypermeth 0.55046 1.000000 insignificant 0.0122091 0.6378700 insignificant 1 insignificant 0.1452686 0.5056577 -3.5832e-01 9 0.190530 0.4937356 -0.3032060 1.0000e+00 2.8994e-33 hypomethylated 1.0000e+00 2.8994e-30 hypomethylated 9.9999e-01 5.2137e-15 hypomethylated 1.0000e+00 5.2137e-12 hypomethylated -0.27249876 3.8365e-03 weaklyHypometh 1.0657e-01 insignificant 0.145038 0.1047382 0.0350967 8 0.159583 0.0850377 0.07454498 7.7683e-03 6.2551e-01 weaklyHypermeth 0.43157271 1.0000e+00 insignificant 2.6939e-02 6.5872e-01 weaklyHypermeth 1.000000 1.0000e+00 insignificant 5.2321e-02 0.0562342 insignificant 1.00000 insignificant 0.1110490 0.5056577 -0.40573024 9 0.186474 0.4937356 -0.30726137 9.9999e-01 2.1971e-25 hypomethylated 1.0000e+00 2.1971e-22 hypomethylated 1.0000e+00 8.7705e-14 hypomethylated 1.0000e+00 8.7705e-11 hypomethylated -0.2847078 2.8262e-03 weaklyHypometh 8.0747e-02 weaklyHypometh 0.1101149 0.1047382 -0.00965894 8 0.138455 0.0850377 0.0534174 3.9140e-01 2.5855e-03 weaklyHypometh 1.0000e+00 5.1710e-01 insignificant 5.3375e-01 3.6208e-02 weaklyHypometh 1.000000 1.000000 insignificant 0.0401115 0.1636461 insignificant 1.00000 insignificant 0.5046067 0.1047382 0.40447764 8 0.4431092 0.0850377 0.3580715 1.5409e-11 1.0000e+00 hypermethylated 1.5409e-08 1.0000e+00 hypermethylated 2.8541e-09 1.0000e+00 hypermethylated 2.8541e-06 1.0000e+00 hypermethylated 3.2482e-01 1.5488e-03 weaklyHypermeth 0.0860452 weaklyHypermeth chr12 56560950 56561950 41729 ENSG00000210429 0.6750000 24 1 0.6307971 101 5 0.4400000 47 4 0.7428571 37 5 0.5833333 12 0 0.6501379 136 5 0.2968750 62 4 0.7063492 54 5 0.9166667 11 0 0.5333333 25 4 0.6544796 101 5 0.6000000 12 0 0.8255633 56 5 0.6750000 16 1 0.5833333 12 0 NA 0 0 0.5000000 4 0 0.5916667 34 5 0.6277778 39 4 0.587550 115 5 0.638889 16 0 0.4750000 23 2 0.4285714 28 4 0.5600000 18 1 0.7500000 4 0 0.7120370 97 5 0.7357143 49 5 0.333333 8 0 0.68051948 51 5 0.5760039 102 5 0.7200000 58 5 0.744129 164 5 0.7815018 64 5 0.65000000 18 0 0.6044408 73 4 0.40000000 5 0 0.588889 51 5 0.7412698 72 5 0.6857143 30 4 0.6500000 56 5 0.7589286 32 4 0.52000000 21 4 0.5666667 26 4 0.6309524 0.5227743 0.42640693 0.6666667 0.6031746 0.6198157 0.2946429 0.6069539 0.8571429 0.5523810 0.4774139 0.4761905 0.7518038 0.6190476 0.5714286 NA 0.4396355 0.6253968 0.5251323 0.535889 0.8095238 0.4642857 0.414966 0.5000000 7.6190e-01 0.6238095 0.6666667 0.000000 0.6277056 0.5154553 0.6587302 0.6590007 0.7438514 0.5357143 0.59053885 0.47619048 0.5507937 0.5963719 0.5918367 0.5555556 0.61394558 0.4000000 0.4444444 0 0.5957684 0.6553398 -0.05158481 5 0.616590 0.656483 -0.03989306 0.87536800 8.9976e-02 insignificant 1.000000 1.0000000 insignificant 0.42330508 8.6969e-01 insignificant 1.00000 1.000000 insignificant 0.0092934 0.8559606 lowCoverage 1 lowCoverage 0.5957684 0.6678445 -7.6072e-02 5 0.616590 0.6916871 -0.0750968 9.6075e-01 3.4143e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 6.5411e-01 4.2088e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00554040 9.3209e-01 lowCoverage 1.0000e+00 lowCoverage 0.595768 0.5878788 -0.0138371 4 0.616590 0.6973684 -0.08077810 7.5720e-01 4.9728e-02 lowCoverage 1.00000000 1.0000e+00 lowCoverage 6.1063e-01 2.5616e-01 lowCoverage 1.000000 1.0000e+00 lowCoverage -1.4119e-02 0.7940239 lowCoverage 1.00000 lowCoverage 0.6553398 0.6678445 -0.02342666 5 0.656483 0.6916871 -0.03520369 8.7218e-01 3.6071e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.5419e-01 4.2507e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0148338 8.3191e-01 lowCoverage 1.0000e+00 lowCoverage 0.6553398 0.5878788 0.04349157 4 0.656483 0.6973684 -0.0408850 2.0281e-01 2.3464e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 6.0569e-01 1.0165e-01 lowCoverage 1.000000 1.000000 lowCoverage -0.0234121 0.6962942 lowCoverage 1.00000 lowCoverage 0.6678445 0.5878788 0.06209481 4 0.6916871 0.6973684 -0.0056813 3.2369e-01 6.6603e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.8186e-01 4.3707e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -8.5783e-03 9.0457e-01 lowCoverage 1.0000000 lowCoverage chr12 56568050 56569050 41730 ENSG00000210429 0.6261272 149 5 0.2364757 266 5 0.5023810 60 4 0.6330948 146 5 0.4040816 54 4 0.7317104 207 5 0.5253623 82 5 0.4386473 56 5 0.4349490 40 4 0.7333333 26 1 0.6307210 174 5 0.8265306 36 4 0.5166667 19 1 0.6145833 28 1 0.6272727 51 4 0.6400000 25 1 NA 0 0 0.3988284 220 5 0.6381355 104 5 0.631237 134 5 0.622222 47 4 0.3627451 43 1 0.5587213 72 5 0.4874459 44 5 0.5302139 287 5 0.4914073 115 5 0.4857143 52 4 0.450000 16 0 0.76497696 80 5 0.6345304 142 5 0.6097036 168 5 0.585397 149 5 0.0000000 135 5 0.05777778 99 5 0.0000000 67 4 0.03050847 293 5 0.000000 166 5 0.0051282 159 5 0.6633050 166 5 0.4346727 159 5 0.5301334 181 5 0.30115830 74 4 0.6268705 147 5 0.5186025 0.2371908 0.34956522 0.4248321 0.4693168 0.5937309 0.4131065 0.3631170 0.4029503 0.6765217 0.5472810 0.5453416 0.2971014 0.5159420 0.4619236 0.5628986 NA 0.2894760 0.5082682 0.438817 0.6294686 0.2856954 0.376779 0.3941653 4.0122e-01 0.4072507 0.4707246 0.217391 0.5217391 0.4488365 0.4007827 0.4967470 0.0000000 0.0338164 0.00000000 0.02122329 0.0000000 0.0011148 0.4247071 0.2432505 0.30018712 0.2408931 0.3748928 1 0.4903017 0.5152263 -0.03327161 5 0.603425 0.588242 0.01518390 0.83215043 1.7333e-01 insignificant 1.000000 1.0000000 insignificant 0.46240511 9.7566e-01 insignificant 1.00000 1.000000 insignificant 0.0193121 0.6665826 lowCoverage 1 lowCoverage 0.4893276 0.0141458 4.7589e-01 5 0.555442 0.0087430 0.5466991 1.4916e-27 1.0000e+00 hypermethylated 2.4861e-25 1.0000e+00 hypermethylated 2.8677e-12 1.0000e+00 hypermethylated 9.5589e-10 1.0000e+00 hypermethylated 0.55233294 2.6480e-13 lowCoverage 1.3240e-10 lowCoverage 0.489043 0.4800550 0.0378184 5 0.499854 0.3884794 0.11137470 3.6208e-02 6.3030e-01 weaklyHypermeth 1.00000000 1.0000e+00 insignificant 2.4367e-02 9.8781e-01 weaklyHypermeth 1.000000 1.0000e+00 insignificant 5.6674e-02 0.4692853 lowCoverage 1.00000 lowCoverage 0.5152263 0.0142232 0.50248821 5 0.588242 0.0112409 0.57700065 2.2264e-31 9.9999e-01 hypermethylated 1.1132e-28 1.0000e+00 hypermethylated 1.0759e-10 1.0000e+00 hypermethylated 3.5865e-08 1.0000e+00 hypermethylated 0.5330208 3.0537e-10 lowCoverage 1.5268e-07 lowCoverage 0.5149007 0.4813793 0.07498902 5 0.590205 0.5438711 0.0463338 2.0073e-02 8.2212e-01 weaklyHypermeth 8.7272e-01 1.0000e+00 insignificant 2.8083e-02 8.2900e-01 weaklyHypermeth 1.000000 1.000000 insignificant 0.0373619 0.6254152 lowCoverage 1.00000 lowCoverage 0.0141767 0.4800550 -0.45881579 5 0.0112409 0.3884794 -0.3772384 1.0000e+00 2.0311e-23 hypomethylated 1.0000e+00 2.0311e-20 hypomethylated 1.0000e+00 6.3878e-07 hypomethylated 1.0000e+00 1.5970e-04 hypomethylated -4.9566e-01 1.4695e-03 lowCoverage 0.0860452 lowCoverage chr12 56576450 56577450 41733 ENSG00000210429 0.1131787 466 17 0.0885291 505 14 0.0192667 691 14 0.0733751 356 17 0.0092186 429 14 0.2218872 555 19 0.0742624 656 14 0.0767726 495 14 0.0175030 558 14 0.0131824 593 15 0.0267381 607 14 0.0153927 628 14 0.0403956 623 15 0.2468864 104 4 0.0221699 582 14 0.0155324 592 14 0.0144991 525 14 0.1414136 422 15 0.0573660 495 17 0.143714 636 19 0.033333 221 12 0.0100840 268 12 0.0606618 523 18 0.0711538 229 13 0.0211931 131 9 0.0652514 686 17 0.0797818 550 15 0.045707 261 15 0.01096778 394 14 0.0482249 745 17 0.0301433 632 17 0.259684 769 17 0.0000000 418 13 0.00816319 275 14 0.0967742 485 13 0.00432900 339 13 0.048330 285 14 0.0558333 562 18 0.1170903 577 17 0.0233602 526 17 0.0042636 385 15 0.01202376 542 17 0.0492542 392 15 0.0216625 0.0090232 0.02047085 0.0234868 0.0159412 0.0307634 0.0216694 0.0129289 0.0148864 0.0154432 0.0286205 0.0261613 0.0089317 0.0376222 0.0262089 0.0127829 0.0357181 0.0239062 0.0152640 0.023975 0.0421053 0.0116978 0.017696 0.0549007 2.1350e-02 0.0100983 0.0337682 0.047290 0.0214554 0.0117292 0.0081316 0.0370354 0.0000000 0.0125151 0.00265717 0.00122399 0.0264668 0.0041616 0.0240182 0.0146065 0.00496212 0.0122593 0.0199368 10 0.0238866 0.0253516 -0.00173423 16 0.183632 0.150309 0.03332235 0.99877743 9.6494e-01 insignificant 1.000000 1.0000000 insignificant 0.92261072 9.9493e-01 insignificant 1.00000 1.000000 insignificant 0.0102153 0.6841499 insignificant 1 insignificant 0.0233422 0.0135708 1.4887e-02 17 0.137025 0.0538053 0.0832192 2.2092e-02 1.0000e+00 weaklyHypermeth 2.3012e-01 1.0000e+00 insignificant 9.7194e-03 1.0000e+00 weaklyHypermeth 1.6474e-01 1.0000e+00 insignificant 0.03599258 1.2359e-01 insignificant 1.0000e+00 insignificant 0.021103 0.0153019 0.0060035 17 0.056500 0.0734242 -0.01692452 1.7320e-01 1.6073e-01 insignificant 1.00000000 1.0000e+00 insignificant 1.2925e-01 6.1841e-01 insignificant 1.000000 1.0000e+00 insignificant 3.0366e-02 0.2676254 insignificant 1.00000 insignificant 0.0239510 0.0139771 0.01533516 16 0.075337 0.0792170 -0.00387964 6.0353e-01 1.0000e+00 insignificant 1.0000e+00 1.0000e+00 insignificant 5.2655e-01 1.0000e+00 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0257773 3.1380e-01 insignificant 1.0000e+00 insignificant 0.0232210 0.0157025 0.00679763 16 0.042875 0.1105178 -0.0676425 9.5354e-01 4.7087e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6915e-01 6.5192e-01 insignificant 1.000000 1.000000 insignificant 0.0201505 0.4875301 insignificant 1.00000 insignificant 0.0077154 0.0157025 -0.01062546 17 0.0556881 0.1105178 -0.0548297 1.0000e+00 1.1106e-02 weaklyHypometh 1.0000e+00 1.5643e-01 insignificant 1.0000e+00 1.2123e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -5.6268e-03 8.3240e-01 insignificant 1.0000000 insignificant chr12 57288150 57289150 41757 ENSG00000213368 0.7182540 119 6 0.5192935 108 6 0.6198413 45 6 0.6875421 154 5 0.4263039 49 6 0.6527778 64 4 0.8138528 38 4 0.6437386 76 6 0.4913832 40 5 0.5366300 38 2 0.5812003 126 6 0.6666667 21 1 0.6952381 80 6 0.6104377 57 6 0.5083333 27 3 0.5166667 19 1 0.4305556 19 1 0.5909370 155 5 0.6815476 40 5 0.738706 56 5 0.708333 23 2 0.7333333 22 3 0.7179487 90 3 0.5561508 52 6 0.8122360 83 5 0.7166667 76 5 0.5676190 28 5 0.638095 23 3 0.67200126 112 5 0.6935374 77 6 0.5750000 69 5 0.650000 59 5 0.6310302 97 6 0.52716728 56 5 0.6282531 74 6 0.40000000 11 0 0.561310 104 5 0.6911992 88 5 0.6346947 88 6 0.6561576 102 6 0.5714588 124 5 0.73750000 81 4 0.7773029 100 5 0.7172996 0.5580971 0.64912598 0.7215701 0.5195901 0.6571730 0.8428407 0.6919715 0.5981917 0.6897111 0.6167566 0.7890295 0.7146474 0.6419384 0.4547468 0.5265823 0.4620253 0.6092555 0.6898734 0.766866 0.7552743 0.8025316 0.716650 0.5526622 7.8044e-01 0.7313643 0.5647597 0.545992 0.7100115 0.6552140 0.6240506 0.6590717 0.6448605 0.5671628 0.66689682 0.40810127 0.5524606 0.6399799 0.6885193 0.6983226 0.64326200 0.7443038 0.7676800 0 0.6395786 0.6624650 -0.01846972 5 0.591845 0.712507 -0.12066226 0.90517597 3.2015e-02 weaklyHypometh 1.000000 1.0000000 insignificant 0.96557393 7.6245e-02 insignificant 1.00000 1.000000 insignificant -0.0635815 0.0580901 lowCoverage 1 lowCoverage 0.6409675 0.6000000 5.7564e-02 5 0.634931 0.5889525 0.0459780 4.3846e-03 7.3637e-01 weaklyHypermeth 5.4808e-02 1.0000e+00 weaklyHypermeth 4.2705e-02 8.7783e-01 weaklyHypermeth 5.7515e-01 1.0000e+00 insignificant 0.03333533 5.0574e-01 lowCoverage 1.0000e+00 lowCoverage 0.640967 0.6888889 -0.0495794 5 0.634931 0.6783627 -0.04343223 9.7939e-01 8.3351e-02 insignificant 1.00000000 1.0000e+00 insignificant 9.5797e-01 1.4507e-01 insignificant 1.000000 1.0000e+00 insignificant -6.8928e-02 0.1544153 lowCoverage 1.00000 lowCoverage 0.6615169 0.6000000 0.08391407 5 0.664592 0.5889525 0.07563955 4.7491e-04 9.6812e-01 weaklyHypermeth 9.4982e-03 1.0000e+00 weaklyHypermeth 7.2351e-03 9.9652e-01 weaklyHypermeth 1.4187e-01 1.0000e+00 insignificant 0.0969169 7.5276e-02 lowCoverage 1.0000e+00 lowCoverage 0.6615169 0.6888889 -0.03506291 5 0.664592 0.6783627 -0.0137707 8.8583e-01 1.1852e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.6669e-01 1.0372e-01 insignificant 1.000000 1.000000 insignificant -0.0053460 0.9043652 lowCoverage 1.00000 lowCoverage 0.6000000 0.6888889 -0.11277486 5 0.5889525 0.6783627 -0.0894103 9.9012e-01 8.3894e-06 weaklyHypometh 1.0000e+00 2.2674e-04 weaklyHypometh 9.8801e-01 1.8702e-03 weaklyHypometh 1.0000e+00 5.5822e-02 weaklyHypometh -1.0226e-01 9.9700e-02 lowCoverage 1.0000000 lowCoverage chr12 61311150 61312150 41789 MIRLET7I ENSG00000199179 0.0303826 320 7 0.0372251 255 7 0.0852079 320 7 0.0301120 142 6 0.0512969 226 7 0.0048019 291 7 0.0121347 339 7 0.0378463 210 7 0.0210281 342 7 0.0174235 276 7 0.0384400 303 7 0.0362325 281 7 0.0526119 284 7 NA 0 0 0.0398112 313 7 0.0394676 273 7 0.0317025 345 7 0.0059524 133 5 0.1515523 232 7 0.103000 300 7 0.012366 158 7 0.0224933 144 5 0.0368992 257 7 0.0070685 156 7 0.0518025 70 4 0.0665772 309 7 0.0344032 156 7 0.014881 107 7 0.03207734 235 7 0.0176190 323 7 0.0951040 330 7 0.039317 324 7 0.0000000 196 7 0.01250000 195 7 0.0044643 139 7 0.00000000 117 5 0.000000 82 7 0.0062112 206 7 0.0179962 341 7 0.0167245 279 7 0.0000000 184 5 0.01845640 241 7 0.0370677 248 7 0.0241480 0.0451181 0.09413719 0.0212652 0.0449359 0.0086435 0.0101141 0.0482632 0.0259363 0.0247663 0.0486899 0.0494844 0.0697883 NA 0.0448133 0.0218893 0.0331252 0.0104308 0.0367725 0.116282 0.0131900 0.0396814 0.039352 0.0131803 7.7953e-02 0.0874693 0.0492841 0.016667 0.0337290 0.0224683 0.1196054 0.0329868 0.0000000 0.0173469 0.00684524 0.00000000 0.0000000 0.0095238 0.0285701 0.0310946 0.00000000 0.0308574 0.0525940 5 0.0416586 0.0498248 -0.00844926 7 0.046350 0.038476 0.00787367 0.78783536 5.1705e-01 insignificant 1.000000 1.0000000 insignificant 0.36001112 8.7534e-01 insignificant 1.00000 1.000000 insignificant 0.0076018 0.4939708 insignificant 1 insignificant 0.0416586 0.0053476 3.5964e-02 7 0.046350 0.0042942 0.0420554 4.0203e-06 1.0000e+00 weaklyHypermeth 8.0406e-05 1.0000e+00 weaklyHypermeth 4.8363e-07 1.0000e+00 weaklyHypermeth 2.1983e-05 1.0000e+00 weaklyHypermeth 0.03962319 1.3574e-04 weaklyHypermeth 6.4637e-03 weaklyHypermeth 0.041659 0.0317092 0.0119346 7 0.046350 0.0175996 0.02874994 9.9303e-03 9.9110e-01 weaklyHypermeth 0.49651672 1.0000e+00 insignificant 6.2494e-03 9.8674e-01 weaklyHypermeth 0.520785 1.0000e+00 insignificant 2.5437e-02 0.0206004 weaklyHypermeth 1.00000 insignificant 0.0498248 0.0053476 0.04362140 7 0.038476 0.0042942 0.03418171 1.3488e-05 1.0000e+00 weaklyHypermeth 3.0653e-04 1.0000e+00 weaklyHypermeth 1.9418e-05 1.0000e+00 weaklyHypermeth 8.4424e-04 1.0000e+00 weaklyHypermeth 0.0320214 1.0792e-03 weaklyHypermeth 3.9971e-02 weaklyHypermeth 0.0498248 0.0317092 0.02259825 7 0.038476 0.0175996 0.0208763 9.6508e-03 9.9784e-01 weaklyHypermeth 4.8636e-01 1.0000e+00 insignificant 3.2043e-02 9.9715e-01 weaklyHypermeth 1.000000 1.000000 insignificant 0.0178350 0.0782616 insignificant 1.00000 insignificant 0.0053476 0.0317092 -0.02256054 7 0.0042942 0.0175996 -0.0133054 9.7328e-01 9.2880e-03 weaklyHypometh 1.0000e+00 1.3419e-01 insignificant 9.9641e-01 3.1092e-02 weaklyHypometh 1.0000e+00 5.3606e-01 insignificant -1.4186e-02 7.1680e-02 insignificant 1.0000000 insignificant chr12 63361450 63362450 41845 MIR548C ENSG00000207546 0.9152732 146 5 0.9111867 115 5 0.5338624 81 5 0.9166667 144 5 0.9000000 36 5 0.9046737 298 5 0.9305556 61 5 0.9735151 176 5 0.8246753 49 5 0.8827839 53 5 0.9274003 277 5 0.7916667 21 1 0.9909091 152 5 0.9177156 73 5 0.8155524 110 5 0.6666667 6 1 0.0000000 2 0 0.7564483 135 5 0.9313083 208 5 0.759345 198 5 0.940171 47 5 0.9633700 45 5 0.9104261 101 5 0.6270833 37 4 0.9882353 29 1 0.9454553 181 5 0.8046032 101 5 0.722222 30 1 0.91594896 146 5 0.9273642 179 5 0.9335628 117 5 0.930304 215 5 0.9500000 90 5 0.88666667 44 5 1.0000000 29 1 1.00000000 3 0 0.967742 70 5 0.9522059 178 5 0.9125449 122 5 0.9482616 145 5 0.9750000 118 5 0.82285714 55 5 0.7953540 107 5 0.9192586 0.8747903 0.62057932 0.9151786 0.8720238 0.9131927 0.8831845 0.9274257 0.8782468 0.9012134 0.9527768 0.9226190 0.9756494 0.8893086 0.9639936 NA 0.6867470 0.9177921 0.9348744 0.965827 0.9290293 0.9447606 0.929585 0.7821429 9.6849e-01 0.9251779 0.8211097 0.678571 0.8678016 0.8969747 0.9299613 0.9202918 0.8660714 0.8642857 NA NA 0.9135945 0.8982077 0.9309238 0.9264055 0.95312500 0.8612245 0.8095482 1 0.9109589 0.9055375 0.00670685 5 0.765362 0.864212 -0.09885004 0.58401252 3.6277e-01 insignificant 1.000000 1.0000000 insignificant 0.51729008 6.1324e-01 insignificant 1.00000 1.000000 insignificant -0.0715519 0.2317514 lowCoverage 1 lowCoverage 0.9135484 0.9323671 -1.9727e-02 5 0.914363 0.9576208 -0.0432574 7.3891e-01 7.6286e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8574e-01 3.0072e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.14692551 1.0056e-02 lowCoverage 2.4828e-01 lowCoverage 0.913548 0.9067642 0.0070933 5 0.914363 0.9054728 0.00889056 5.2805e-01 8.2552e-01 insignificant 1.00000000 1.0000e+00 insignificant 1.7384e-01 9.3403e-01 insignificant 1.000000 1.0000e+00 insignificant -7.8293e-02 0.2114298 lowCoverage 1.00000 lowCoverage 0.9060458 0.9323671 -0.03263112 5 0.909896 0.9576208 -0.04772446 9.8697e-01 1.5754e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9428e-01 1.1535e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0753736 5.2144e-02 lowCoverage 8.1475e-01 lowCoverage 0.9060458 0.9067642 -0.00176305 5 0.909896 0.9054728 0.0044235 5.5332e-01 6.4673e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.3159e-01 8.2875e-01 insignificant 1.000000 1.000000 insignificant -0.0067413 0.8889314 lowCoverage 1.00000 lowCoverage 0.9323671 0.9067642 0.02596518 5 0.9576208 0.9054728 0.0521479 6.7374e-03 8.7037e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 8.6840e-03 9.8221e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 6.8632e-02 1.3022e-01 lowCoverage 1.0000000 lowCoverage chr12 63361550 63362550 41846 MIR548C ENSG00000207546 0.8592011 550 12 0.8084457 300 12 0.6285297 241 12 0.8724887 471 12 0.8476390 251 12 0.8783586 567 12 0.8420001 268 12 0.8064802 346 12 0.7237429 165 12 0.8382480 239 12 0.8290552 599 12 0.7803847 143 8 0.9107960 419 12 0.8519085 171 12 0.7971832 296 12 0.7534895 119 7 0.5715748 183 7 0.7900886 534 12 0.8557833 439 12 0.798868 440 12 0.817369 142 12 0.8766833 139 12 0.8580520 321 12 0.7115584 135 10 0.9184321 159 8 0.8717328 328 12 0.8180475 193 10 0.727289 105 8 0.83370413 331 12 0.8492355 378 12 0.8573658 289 12 0.881085 517 12 0.8474453 271 12 0.78299533 209 12 0.8381315 179 8 0.85856331 64 6 0.808889 193 12 0.8667620 373 12 0.8470357 482 12 0.8885017 498 12 0.8972817 453 12 0.84479954 434 12 0.8228081 401 12 0.8515647 0.7801052 0.69097525 0.8819981 0.8260018 0.8793750 0.8246055 0.7693073 0.7073832 0.8435785 0.8203363 0.8413137 0.8982874 0.8632608 0.8355758 0.7867923 0.7522119 0.8440313 0.8381468 0.878228 0.7882986 0.8312376 0.863287 0.8043039 8.8796e-01 0.8305436 0.8263256 0.728408 0.8068961 0.8500052 0.8460039 0.8623122 0.8059713 0.7562611 0.87751492 0.85201614 0.7785229 0.8556888 0.8520446 0.8694826 0.89040659 0.8775452 0.8486552 7 0.8408551 0.8547909 -0.00152323 12 0.777057 0.834108 -0.05705086 0.88246829 2.7753e-01 insignificant 1.000000 1.0000000 insignificant 0.84286379 2.5364e-01 insignificant 1.00000 1.000000 insignificant -0.0328330 0.2081346 insignificant 1 insignificant 0.8416357 0.8324282 6.6228e-03 12 0.841090 0.8484974 -0.0074073 4.7413e-01 4.0335e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.5864e-01 1.3049e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03158440 1.7621e-01 insignificant 1.0000e+00 insignificant 0.841636 0.8593474 -0.0309904 12 0.841090 0.8658654 -0.02477528 9.8594e-01 2.6893e-02 weaklyHypometh 1.00000000 1.0000e+00 insignificant 8.9606e-01 1.6774e-02 weaklyHypometh 1.000000 1.0000e+00 insignificant -5.7872e-02 0.0226198 weaklyHypometh 1.00000 insignificant 0.8549291 0.8324282 0.00662078 12 0.848126 0.8484974 -0.00037176 6.5631e-01 2.6606e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.3061e-01 2.1124e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0012486 9.5525e-01 insignificant 1.0000e+00 insignificant 0.8549291 0.8593474 -0.02590130 12 0.848126 0.8658654 -0.0177397 9.3491e-01 1.2148e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.0233e-01 1.2792e-01 insignificant 1.000000 1.000000 insignificant -0.0250391 0.2857598 insignificant 1.00000 insignificant 0.8324282 0.8593474 -0.03703988 12 0.8484974 0.8658654 -0.0173680 3.0548e-01 5.1845e-02 insignificant 1.0000e+00 5.5747e-01 insignificant 3.0471e-01 2.9398e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -2.6288e-02 2.0576e-01 insignificant 1.0000000 insignificant chr12 66069550 66070550 41889 ENSG00000210608 0.7597723 90 5 0.6557143 77 4 0.5600000 38 3 0.9111111 79 5 0.2666667 13 1 0.7967464 84 5 0.8222222 24 3 0.8262626 42 5 0.7466667 17 1 0.9000000 10 1 0.8971313 124 4 0.5312500 13 1 0.8750000 24 1 0.8100000 47 4 0.8571429 9 1 0.4444444 8 1 0.3333333 20 1 0.8280000 40 2 0.8933333 19 1 0.817949 47 4 0.850000 20 1 1.0000000 6 0 0.8185714 54 4 0.8484848 45 5 0.4000000 6 1 0.7522783 101 4 0.6457143 29 3 0.375000 10 0 0.82500000 17 1 0.7735065 76 5 0.8760000 87 4 0.823303 87 4 0.8442308 60 5 0.76833333 37 4 0.2483381 77 3 1.00000000 7 0 0.633810 25 3 0.9252174 89 5 0.8879406 96 5 0.8712258 117 5 0.7854167 69 5 0.57142857 49 1 0.8356725 114 5 0.7497154 0.6696429 0.56000000 0.8888889 0.3333333 0.7686603 0.7777778 0.8055556 0.7666667 0.8750000 0.8934729 0.5312500 0.8750000 0.7625000 0.7538160 0.5272952 0.4898140 0.7850000 0.8666667 0.772436 0.8125000 0.8625271 0.773214 0.8106061 6.4519e-01 0.7059729 0.5750000 0.611500 0.7812500 0.7585498 0.8450000 0.8245833 0.8052885 0.7604167 0.33428928 1.00000000 0.5422619 0.9065217 0.8599258 0.8390323 0.73177083 0.8223508 0.7945906 0 0.7600000 0.8568773 -0.03102599 5 0.802345 0.832369 -0.03002389 0.95115130 2.6652e-01 insignificant 1.000000 1.0000000 insignificant 0.86685708 4.1567e-01 insignificant 1.00000 1.000000 insignificant -0.0223509 0.7512062 lowCoverage 1 lowCoverage 0.7600000 0.6915254 1.2775e-01 5 0.802345 0.6897756 0.1125698 8.5509e-03 9.4882e-01 weaklyHypermeth 1.0302e-01 1.0000e+00 insignificant 5.6401e-01 6.3410e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01001754 9.3533e-01 lowCoverage 1.0000e+00 lowCoverage 0.760000 0.7550562 -0.0463631 5 0.802345 0.8573463 -0.05500089 9.8015e-01 9.6091e-02 insignificant 1.00000000 1.0000e+00 insignificant 9.8425e-01 1.0075e-01 insignificant 1.000000 1.0000e+00 insignificant -6.3700e-02 0.4000752 lowCoverage 1.00000 lowCoverage 0.8568773 0.6915254 0.17052082 5 0.832369 0.6897756 0.14259373 1.1761e-02 9.8389e-01 weaklyHypermeth 1.4170e-01 1.0000e+00 insignificant 3.8223e-01 7.8808e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0123334 9.2283e-01 lowCoverage 1.0000e+00 lowCoverage 0.8568773 0.7550562 -0.02241884 5 0.832369 0.8573463 -0.0249770 8.9049e-01 3.4409e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.1671e-01 1.9832e-01 insignificant 1.000000 1.000000 insignificant -0.0413486 0.6111106 lowCoverage 1.00000 lowCoverage 0.6915254 0.7550562 -0.19608354 5 0.6897756 0.8573463 -0.1675707 9.9818e-01 3.6865e-02 weaklyHypometh 1.0000e+00 4.2373e-01 insignificant 9.7657e-01 2.3060e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -5.3682e-02 6.7883e-01 lowCoverage 1.0000000 lowCoverage chr12 66718650 66719650 41902 DYRK2 ENSG00000127334 0.7318980 186 6 0.6827369 154 6 0.7402807 118 6 0.7582186 116 6 NA 0 0 0.7229483 158 6 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 0.6429012 135 6 NA 0 0 0.778649 136 6 NA 0 0 NA 0 0 0.7281743 134 6 NA 0 0 NA 0 0 0.7291181 142 6 NA 0 0 NA 0 0 NA 0 0 0.7637512 153 6 0.8222041 141 6 0.710235 184 6 0.7175645 125 6 NA 0 0 0.7255291 80 6 NA 0 0 NA 0 0 0.6792929 87 6 0.7166493 208 5 0.7091620 143 5 0.6867899 170 5 0.79274630 229 5 0.7639632 168 5 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0.6879362 0.7267905 -0.03746066 5 0.716794 0.756383 -0.03958859 0.90669533 5.7338e-02 insignificant 1.000000 1.0000000 insignificant 0.89593874 1.4104e-01 insignificant 1.00000 1.000000 insignificant -0.0281776 0.3141045 lowCoverage 1 lowCoverage 0.6879362 0.6883562 -5.3489e-04 4 0.716794 0.7157475 0.0010469 4.0868e-01 3.4995e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.0696e-01 4.4498e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.01505678 5.2484e-01 lowCoverage 1.0000e+00 lowCoverage 0.687936 0.7287582 -0.0343792 5 0.716794 0.7338084 -0.01701407 6.9559e-01 6.6028e-02 insignificant 1.00000000 1.0000e+00 insignificant 8.7004e-01 9.9033e-02 insignificant 1.000000 1.0000e+00 insignificant -1.1343e-02 0.6733165 lowCoverage 1.00000 lowCoverage 0.7267905 0.6883562 0.04295746 5 0.756383 0.7157475 0.04063545 3.5768e-02 8.7652e-01 weaklyHypermeth 3.7258e-01 1.0000e+00 insignificant 1.9795e-01 9.6716e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0432344 1.2758e-01 lowCoverage 1.0000e+00 lowCoverage 0.7267905 0.7287582 0.00101004 5 0.756383 0.7338084 0.0225745 2.0552e-01 2.2149e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.1281e-01 3.3365e-01 insignificant 1.000000 1.000000 insignificant 0.0168345 0.5607648 lowCoverage 1.00000 lowCoverage 0.6883562 0.7287582 -0.03777459 4 0.7157475 0.7338084 -0.0180609 3.0372e-01 3.6424e-02 lowCoverage 1.0000e+00 4.2353e-01 lowCoverage 6.9391e-01 1.3159e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -2.6400e-02 3.1450e-01 lowCoverage 1.0000000 lowCoverage chr12 78370313 78371313 42086 MIR1252 ENSG00000221788 0.662688 117 5 0.6353992 94 5 0.815476 36 5 0.5993333 93 5 0.8333333 27 2 0.586275 75 5 0.597192 64 5 0.8215686 60 5 0.5600000 25 5 0.433333 13 0 0.620296 109 5 0.500000 10 0 0.7445887 53 5 0.600000 36 5 0.6750000 33 3 0.333333 9 0 0.500000 2 0 0.6552273 91 4 0.688889 33 3 0.657283 67 5 0.580000 22 2 1.000000 2 0 0.600000 27 5 0.5769841 44 5 0.703571 52 3 0.688000 80 5 0.640000 22 2 0.857143 20 1 0.6838828 52 5 0.680486 77 5 0.695833 53 5 0.662500 77 5 0.5913165 77 5 0.4600000 40 5 0.6200000 60 5 0.6000000 11 0 0.6095238 66 5 0.604762 74 5 0.5781818 87 5 0.729282 104 5 0.684555 98 5 0.9000000 32 3 0.633117 86 5 0.653160 0.6264801 0.7613636 0.5990909 0.7727273 0.587344 0.5895882 0.8279857 0.6181818 0.5000000 0.5991554 0.409091 0.5730028 0.575758 0.6174242 0.3833259 0.580527 0.602583 0.6363636 0.491176 0.5363636 0.7166243 0.618182 0.5329004 0.6866883 0.6763636 0.6545455 0.818182 0.591808 0.6834376 0.7329545 0.6647727 0.5674815 0.5181818 0.5909091 0.45454545 0.6103896 0.6021645 0.5603306 0.7227473 0.7222285 0.8636364 0.6773908 0 0.615091 0.656546 -0.03232607 5 0.708707 0.681236 0.0274718 0.84838562 0.44376193 insignificant 1.000000 1.00000 insignificant 0.841629 0.56285677 insignificant 1 1.00000 insignificant -0.0714060 0.1242630 lowCoverage 1.00000 lowCoverage 0.611219 0.5945122 0.0282136 5 0.620762 0.5918338 0.0289279 1.0170e-01 0.744229 insignificant 1.0000e+00 1 insignificant 5.3166e-02 0.66528 insignificant 9.8455e-01 1 insignificant 0.0450270 2.4382e-01 lowCoverage 1.0000000 lowCoverage 0.611219 0.6830467 -0.0648873 5 0.620762 0.670006 -0.04924386 9.0438e-01 0.05025388 insignificant 1.0000e+00 1.00000 insignificant 0.98562945 0.07175801 insignificant 1.000000 1.000000 insignificant -0.0790664 0.24545402 lowCoverage 1.000000 lowCoverage 0.654511 0.5945122 0.0607902 5 0.653730 0.5918338 0.0618960 3.6115e-02 0.93132 weaklyHypermeth 4.5715e-01 1 insignificant 8.3971e-02 0.97432 insignificant 1.0000e+00 1 insignificant 0.1164330 0.01469062 lowCoverage 0.445170 lowCoverage 0.654511 0.6830467 -0.01455214 5 0.653730 0.670006 -0.0162758 0.80669897 0.2655614 insignificant 1.000000 1.00000 insignificant 0.91844039 0.2350241 insignificant 1.00000 1 insignificant -0.00766043 0.9093195 lowCoverage 1.00000 lowCoverage 0.5945122 0.6830467 -7.9774e-02 5 0.5918338 0.6700055 -0.0781717 0.91137 6.6941e-03 weaklyHypometh 1 1.3661e-01 insignificant 0.99143 5.3049e-03 weaklyHypometh 1 0.17683151 insignificant -0.1240934 0.0881458 lowCoverage 1.00000 lowCoverage chr12 84723813 84724813 42125 RASSF9 ENSG00000198774 0.791064 159 5 0.6285247 51 6 0.533333 24 2 0.7766638 106 5 0.8291667 30 3 0.747857 78 6 0.546825 35 6 0.7000000 50 5 0.9696970 27 2 0.686667 37 5 0.844292 98 6 1.000000 8 0 0.7415126 53 5 0.750000 22 3 0.6013333 56 2 0.400000 11 0 NA 0 0 0.6432416 105 5 0.755556 55 4 0.840741 52 5 0.805556 34 5 1.000000 3 0 0.790645 120 5 0.7645910 57 5 0.841667 34 5 0.904762 38 5 0.615909 47 5 0.813095 23 2 0.9282407 42 2 0.770319 81 6 0.823972 73 6 0.863636 57 5 0.4421769 54 2 0.8833333 34 2 0.6246753 85 5 0.8666667 15 0 0.5942130 41 3 0.757588 52 5 0.8365410 142 6 0.784402 103 6 0.772977 134 6 0.8098291 63 5 0.791740 130 6 0.794513 0.6985896 0.6120858 0.8356765 0.8372807 0.756015 0.5956558 0.7380117 0.9441786 0.7269006 0.8458454 0.853198 0.7915672 0.792982 0.7298246 0.2573099 NA 0.883782 0.7371345 0.850877 0.8061821 0.8896388 0.812780 0.7293811 0.8144737 0.9197995 0.6445204 0.823413 0.941520 0.7721376 0.8746298 0.8755981 0.3809524 0.8684211 0.7099567 0.90643275 0.5493421 0.7897353 0.8526994 0.8163743 0.7511870 0.8175888 0.7913096 0 0.795066 0.809524 -0.02745243 5 0.764168 0.800365 -0.0361971 0.92276141 0.09854336 insignificant 1.000000 1.00000 insignificant 0.993099 0.01704427 weaklyHypometh 1 1.00000 insignificant -0.1012621 0.0278292 lowCoverage 1.00000 lowCoverage 0.795261 0.7295374 0.0935708 2 0.797858 0.6033689 0.1944894 1.1560e-01 0.985417 lowCoverage 1.0000e+00 1 lowCoverage 6.8204e-01 0.91716 lowCoverage 1.0000e+00 1 lowCoverage 0.0308284 7.0343e-01 lowCoverage 1.0000000 lowCoverage 0.794313 0.8216783 -0.0183704 5 0.655001 0.819912 -0.16491049 9.4358e-01 0.42168786 insignificant 1.0000e+00 1.00000 insignificant 0.92030631 0.52490941 insignificant 1.000000 1.000000 insignificant -0.0734938 0.05145991 lowCoverage 1.000000 lowCoverage 0.809524 0.7321429 0.1094026 2 0.800365 0.7039304 0.0964347 2.3247e-02 0.99913 lowCoverage 3.2287e-01 1 lowCoverage 1.6067e-01 0.99036 lowCoverage 1.0000e+00 1 lowCoverage 0.1320905 0.12614260 lowCoverage 1.000000 lowCoverage 0.809524 0.8213660 0.01220251 5 0.800365 0.789897 0.0104682 0.41519817 0.4737631 insignificant 1.000000 1.00000 insignificant 0.36730010 0.8785959 insignificant 1.00000 1 insignificant 0.02776826 0.3684163 lowCoverage 1.00000 lowCoverage 0.7321429 0.8213660 -1.0874e-01 2 0.7039304 0.7898969 -0.0859665 0.95435 7.2043e-02 lowCoverage 1 9.2363e-01 lowCoverage 0.90675 5.6602e-01 lowCoverage 1 1.00000000 lowCoverage -0.1043223 0.1994276 lowCoverage 1.00000 lowCoverage chr12 84740513 84741513 42126 RASSF9 ENSG00000198774 0.611111 48 5 0.6590608 53 5 0.588095 25 2 0.6638072 68 5 0.7666667 12 0 0.478077 129 5 0.766667 13 0 0.6491402 42 5 0.6250000 22 0 0.708333 22 1 0.869886 92 5 0.333333 10 0 0.8234127 26 3 0.200000 5 0 1.0000000 11 2 NA 0 0 0.666667 3 0 0.7448485 58 5 0.933333 37 3 0.809365 90 5 0.508333 29 1 0.783636 30 3 0.742857 27 4 0.7450000 48 6 0.780000 23 2 0.861683 71 5 0.607143 30 2 0.333333 12 0 0.8737843 68 3 0.809524 38 5 0.736471 49 4 0.678870 112 5 0.7366667 28 3 0.8333333 31 5 0.6250000 39 3 0.8750000 8 0 0.4861111 24 3 0.628571 54 5 0.6693723 42 5 0.782738 54 5 0.868254 66 5 0.8809524 19 0 0.880000 41 4 0.769547 0.6161817 0.6080247 0.7961147 0.6913580 0.745849 0.6913580 0.7060553 0.5740741 0.7129630 0.8481125 0.287772 0.7773369 0.370370 0.8062908 NA 0.703590 0.771156 0.9228395 0.807260 0.6666667 0.7659933 0.851852 0.8472222 0.7777778 0.8347156 0.6825397 0.629293 0.834905 0.7883598 0.7267974 0.6612568 0.7962963 0.8641975 0.5709877 0.73670194 0.5975309 0.6560847 0.8221501 0.8212081 0.8730159 0.8827160 0.8888889 0 0.750653 0.765363 -0.01314920 5 0.641274 0.589854 0.0514198 0.19967614 0.08672966 insignificant 1.000000 1.00000 insignificant 0.513399 0.03540845 weaklyHypometh 1 1.00000 insignificant -0.0262738 0.6803057 lowCoverage 1.00000 lowCoverage 0.750329 0.6739130 0.0557295 5 0.626844 0.6728120 -0.0459679 5.0893e-01 0.381934 insignificant 1.0000e+00 1 insignificant 6.3838e-01 0.50922 insignificant 1.0000e+00 1 insignificant -0.0186680 8.0579e-01 lowCoverage 1.0000000 lowCoverage 0.750000 0.8468468 -0.0993299 5 0.611751 0.783056 -0.17130573 9.9968e-01 0.01707008 weaklyHypometh 1.0000e+00 0.55065 insignificant 0.99997592 0.01168911 weaklyHypometh 1.000000 0.649395 insignificant -0.1374842 0.03840816 lowCoverage 0.984825 lowCoverage 0.767790 0.6739130 0.0698762 5 0.613174 0.6728120 -0.0596380 7.4230e-02 0.57327 insignificant 8.3404e-01 1 insignificant 3.3053e-01 0.74190 insignificant 1.0000e+00 1 insignificant 0.0076058 0.92064145 lowCoverage 1.000000 lowCoverage 0.777563 0.8468468 -0.08361175 5 0.627433 0.783056 -0.1556239 0.94925498 0.1066877 insignificant 1.000000 1.00000 insignificant 0.86410723 0.2236404 insignificant 1.00000 1 insignificant -0.11121045 0.0912235 lowCoverage 1.00000 lowCoverage 0.6703297 0.8468468 -1.5143e-01 5 0.6400932 0.7830565 -0.1429633 0.99999 1.1072e-01 insignificant 1 1.0000e+00 insignificant 1.00000 2.3097e-01 insignificant 1 1.00000000 insignificant -0.1188163 0.1365857 lowCoverage 1.00000 lowCoverage chr12 86426313 86427313 42133 MGAT4C ENSG00000182050 0.778668 327 13 0.7695242 216 13 0.621542 185 12 0.8453541 253 12 0.7709707 105 12 0.740813 406 13 0.694851 139 13 0.7072473 186 10 0.8268862 109 10 0.768424 137 12 0.802616 393 13 0.526674 85 7 0.8685205 196 13 0.908163 44 7 0.7364061 138 13 0.710832 80 11 0.679843 74 8 0.8345171 249 12 0.865171 196 12 0.667916 356 13 0.731602 79 9 0.874600 85 10 0.844939 238 12 0.8424370 93 8 0.838889 75 8 0.837128 280 13 0.795912 111 8 0.729464 59 5 0.8880445 148 10 0.708601 269 11 0.767100 243 13 0.728010 462 13 0.6227695 168 11 0.6366708 162 12 0.7889487 280 13 0.6966570 82 7 0.7385027 82 7 0.727667 244 13 0.8559819 333 13 0.806904 310 13 0.843208 329 13 0.8605121 325 12 0.802491 356 13 0.847538 0.7758005 0.7943442 0.8568679 0.7778457 0.772317 0.6851796 0.7801764 0.7868966 0.8229948 0.7842197 0.561373 0.8527865 0.865803 0.8832626 0.7171402 0.713856 0.840583 0.8451674 0.780494 0.7708333 0.8731042 0.826395 0.8551451 0.8376462 0.8090772 0.7875513 0.845841 0.831364 0.7168236 0.7705267 0.8355378 0.6608215 0.6947960 0.7747397 0.67944049 0.6893864 0.8041570 0.8643219 0.8922410 0.8655837 0.8741841 0.8003022 4 0.803562 0.818861 -0.01160570 13 0.671781 0.773289 -0.1015075 0.98534591 0.01106017 weaklyHypometh 1.000000 1.00000 insignificant 0.997663 0.00928974 weaklyHypometh 1 1.00000 insignificant -0.0426468 0.1338085 insignificant 1.00000 insignificant 0.804084 0.7642436 0.0488370 13 0.687768 0.7790009 -0.0912324 2.3271e-03 0.970441 weaklyHypermeth 4.5630e-02 1 weaklyHypermeth 7.1909e-03 0.91501 weaklyHypermeth 2.0545e-01 1 insignificant 0.0543777 1.2677e-01 insignificant 1.0000000 insignificant 0.805232 0.8542045 -0.0547108 13 0.775624 0.787357 -0.01173350 9.9916e-01 0.00602625 weaklyHypometh 1.0000e+00 0.33215 insignificant 0.99923043 0.00363749 weaklyHypometh 1.000000 0.404165 insignificant -0.0775723 0.00392807 weaklyHypometh 0.226297 insignificant 0.819204 0.7642436 0.0612674 13 0.776760 0.7790009 -0.0022412 2.7562e-04 0.99061 weaklyHypermeth 7.2531e-03 1 weaklyHypermeth 1.1291e-03 0.99890 weaklyHypermeth 4.7045e-02 1 weaklyHypermeth 0.0970245 0.01194007 weaklyHypermeth 0.411727 insignificant 0.820585 0.8542045 -0.04374251 13 0.801201 0.787357 0.0138442 0.92418893 0.0162836 weaklyHypometh 1.000000 0.90731 insignificant 0.68392603 0.0909613 insignificant 1.00000 1 insignificant -0.03492545 0.1339949 insignificant 1.00000 insignificant 0.7635468 0.8542045 -1.0680e-01 13 0.7316439 0.7873571 -0.0557132 0.99945 5.7466e-06 weaklyHypometh 1 3.5916e-04 weaklyHypometh 0.99986 5.0199e-05 weaklyHypometh 1 0.01003981 weaklyHypometh -0.1319500 0.0024269 weaklyHypometh 0.18669 insignificant chr12 92204313 92205313 42297 ENSG00000201502 0.864341 250 8 0.7863732 306 11 0.675491 145 8 0.8555307 187 10 0.8310440 70 5 0.779553 264 11 0.671637 92 4 0.8359243 121 7 0.7907164 101 7 0.735022 88 5 0.755272 228 8 0.815705 56 4 0.9083333 74 7 0.854025 60 7 0.6552028 73 5 0.809524 57 4 0.711645 962 4 0.7931552 196 10 0.823184 77 6 0.713529 203 9 0.773893 44 3 1.000000 43 3 0.706530 118 9 0.6234023 86 9 0.654834 74 7 0.757229 288 10 0.920040 116 8 0.612500 37 5 0.7573864 70 5 0.780027 294 11 0.823707 252 10 0.846786 267 11 0.7021227 202 10 0.7479901 80 7 0.7028123 235 10 0.7333333 15 0 0.5058979 226 8 0.768738 242 11 0.8584678 281 10 0.892900 221 10 0.831189 251 10 0.8405989 174 7 0.857257 262 10 0.820513 0.7427996 0.7178962 0.8163934 0.7403171 0.740290 0.6530917 0.7656320 0.7306650 0.7743669 0.7215059 0.716758 0.9029144 0.851776 0.7010148 0.7696511 0.790969 0.733304 0.7684495 0.819478 0.8678016 1.0000000 0.788088 0.6718538 0.7599492 0.6876629 0.9065726 0.706557 0.732023 0.8276624 0.7597218 0.7159253 0.7038791 0.6954321 0.6873821 0.75337863 0.5506043 0.7567265 0.8069291 0.8649952 0.7653853 0.8403291 0.8042698 4 0.795845 0.803434 0.00804731 9 0.753250 0.761872 -0.0086221 0.10365813 0.77700337 insignificant 1.000000 1.00000 insignificant 0.736236 0.43060816 insignificant 1 1.00000 insignificant 0.0118993 0.7521557 insignificant 1.00000 insignificant 0.796836 0.6900000 0.1226696 9 0.819423 0.6428114 0.1766116 2.9139e-12 0.999997 weaklyHypermeth 1.8212e-10 1 weaklyHypermeth 1.5760e-04 0.99993 weaklyHypermeth 9.2705e-03 1 weaklyHypermeth 0.0897781 7.1730e-02 insignificant 1.0000000 insignificant 0.796988 0.8284272 -0.0292790 9 0.815629 0.856321 -0.04069130 9.7496e-01 0.00103297 weaklyHypometh 1.0000e+00 0.14757 insignificant 0.99962630 0.00680240 weaklyHypometh 1.000000 0.522373 insignificant -0.0728222 0.00099628 weaklyHypometh 0.090571 weaklyHypometh 0.803561 0.6900000 0.1142447 10 0.746559 0.6428114 0.1037480 1.2597e-06 0.99732 weaklyHypermeth 5.2488e-05 1 weaklyHypermeth 8.3989e-04 0.97925 weaklyHypermeth 4.1994e-02 1 weaklyHypermeth 0.0778788 0.15537026 insignificant 1.000000 insignificant 0.809927 0.8284272 -0.04944172 9 0.801682 0.856321 -0.0546389 0.99984607 0.0018941 weaklyHypometh 1.000000 0.30206 insignificant 0.99923654 0.0474553 weaklyHypometh 1.00000 1 insignificant -0.08472149 0.0314575 weaklyHypometh 1.00000 insignificant 0.6953441 0.8284272 -1.4927e-01 9 0.6938812 0.8563206 -0.1624394 1.00000 3.1851e-10 weaklyHypometh 1 6.0680e-08 weaklyHypometh 0.99998 9.8414e-07 weaklyHypometh 1 0.00098414 weaklyHypometh -0.1626003 0.0076197 weaklyHypometh 0.40104 insignificant chr12 93470213 93471213 42363 ENSG00000187738 0.809477 264 9 0.7528027 284 7 0.808194 160 6 0.8543056 225 8 0.7671697 147 9 0.854668 503 9 0.791190 204 9 0.8227663 242 9 0.7464786 211 9 0.816826 131 9 0.838150 358 10 0.775393 101 8 0.8138875 178 9 0.881506 105 4 0.7609091 149 8 0.669208 55 3 0.676687 92 5 0.8622652 218 7 0.878027 209 10 0.810373 436 10 0.834140 86 7 0.847064 86 7 0.800904 152 8 0.7931106 128 6 0.770833 50 3 0.818304 346 9 0.790705 105 5 0.774637 77 6 0.7918757 204 8 0.814759 383 9 0.792481 288 9 0.826385 368 9 0.7257974 226 6 0.5693579 81 6 0.5215882 345 9 0.8214286 14 0 0.5264395 288 7 0.729575 301 9 0.8220391 342 9 0.822374 243 8 0.708877 180 8 0.8341698 160 9 0.897917 224 9 0.845639 0.7299364 0.8188793 0.8497606 0.7442275 0.831642 0.8245336 0.7962596 0.8115333 0.7876372 0.8655830 0.808567 0.8604787 0.830670 0.7674800 0.5373676 0.613849 0.808973 0.8813395 0.835019 0.7814973 0.8458953 0.783215 0.7749651 0.8834868 0.7920609 0.7267234 0.826593 0.818965 0.8180375 0.7454884 0.8114830 0.7111772 0.6304339 0.4568421 0.77303474 0.7715500 0.7099688 0.7661688 0.7996901 0.6833717 0.7973416 0.8444256 3 0.816479 0.814782 0.00223295 9 0.827612 0.810578 0.0170348 0.03770563 0.27640008 weaklyHypermeth 1.000000 1.00000 insignificant 0.181472 0.17752995 insignificant 1 1.00000 insignificant -0.0050859 0.7342996 insignificant 1.00000 insignificant 0.816479 0.7322709 0.1081504 9 0.827612 0.5991069 0.2285054 5.8131e-12 0.953059 weaklyHypermeth 3.2295e-10 1 weaklyHypermeth 2.0676e-03 0.94031 weaklyHypermeth 7.9522e-02 1 weaklyHypermeth 0.1504831 3.1954e-02 weaklyHypermeth 0.9129759 insignificant 0.816479 0.7737163 0.0263207 8 0.827612 0.831821 -0.00420851 9.8065e-02 0.35327827 insignificant 1.0000e+00 1.00000 insignificant 0.22588549 0.23752128 insignificant 1.000000 1.000000 insignificant -0.0175612 0.61726625 insignificant 1.000000 insignificant 0.814782 0.7322709 0.1059487 9 0.810578 0.5991069 0.2114706 6.3054e-08 0.79917 weaklyHypermeth 4.2036e-06 1 weaklyHypermeth 4.2209e-03 0.90659 weaklyHypermeth 1.3326e-01 1 insignificant 0.1555690 0.02910325 weaklyHypermeth 0.692871 insignificant 0.814782 0.7737163 0.01795139 8 0.810578 0.831821 -0.0212433 0.48592351 0.4417970 insignificant 1.000000 1.00000 insignificant 0.65766431 0.5395086 insignificant 1.00000 1 insignificant -0.01247525 0.7082347 insignificant 1.00000 insignificant 0.7322709 0.7737163 -4.2539e-02 8 0.5991069 0.8318209 -0.2327140 0.90327 2.7493e-04 weaklyHypometh 1 9.8190e-03 weaklyHypometh 0.91163 1.9517e-02 weaklyHypometh 1 0.46252044 insignificant -0.1680442 0.0232716 weaklyHypometh 0.79202 insignificant chr12 97573513 97574513 42424 APAF1 ENSG00000120868 0.823718 65 2 0.7715729 63 5 0.727183 35 5 0.8673077 76 5 0.6485714 41 5 0.856643 66 5 0.700000 34 2 0.6888889 79 5 0.6000000 35 5 0.800000 24 3 0.725118 124 5 0.640000 25 5 0.7301587 53 5 0.775000 54 5 0.7571429 37 5 0.821429 24 2 0.600000 6 0 0.9355263 66 2 0.702381 22 3 0.629630 36 5 0.893333 21 3 0.888889 18 3 0.640606 41 5 0.7925170 36 5 0.837143 47 5 0.925000 65 5 0.875000 21 0 0.916667 8 0 0.8642857 51 2 0.834028 60 5 0.773810 31 3 0.849351 43 5 0.7437229 76 5 0.6548052 59 5 0.6461538 51 5 0.6000000 5 0 0.6891534 49 5 0.831818 50 5 0.7013476 80 5 0.808148 84 5 0.741494 95 5 0.5366667 23 2 0.693289 90 5 0.776442 0.7251804 0.6693948 0.8569712 0.6264881 0.756410 0.6830357 0.7625000 0.7625000 0.6736111 0.7224469 0.629167 0.8078704 0.763021 0.7366071 0.7343750 0.583333 0.923849 0.8363095 0.740741 0.9097222 0.8483100 0.618056 0.6929563 0.8425595 0.9192708 0.8333333 0.885417 0.859375 0.7855903 0.7120536 0.8468615 0.7354798 0.6463745 0.6383547 0.58333333 0.6015212 0.8218119 0.6916998 0.7947531 0.7312261 0.5194444 0.6735966 0 0.756224 0.821267 -0.06209334 5 0.756819 0.885767 -0.1289484 0.99974840 0.03101082 weaklyHypometh 1.000000 1.00000 insignificant 0.999930 0.03942856 weaklyHypometh 1 1.00000 insignificant -0.1008722 0.0027739 lowCoverage 0.92465 lowCoverage 0.756276 0.7103448 0.0511602 5 0.742425 0.7598811 -0.0174562 1.1279e-01 0.836686 insignificant 1.0000e+00 1 insignificant 2.9414e-01 0.90480 insignificant 1.0000e+00 1 insignificant 0.0457379 2.7747e-01 lowCoverage 1.0000000 lowCoverage 0.757996 0.7500000 0.0279651 5 0.757576 0.721150 0.03642640 1.5167e-01 0.65911045 insignificant 1.0000e+00 1.00000 insignificant 0.14430494 0.91434043 insignificant 1.000000 1.000000 insignificant 0.0438244 0.40944548 lowCoverage 1.000000 lowCoverage 0.820046 0.7103448 0.1060794 5 0.847689 0.7598811 0.0878084 6.3191e-03 0.99756 weaklyHypermeth 1.0895e-01 1 insignificant 1.9424e-02 0.99969 weaklyHypermeth 4.1101e-01 1 insignificant 0.1466101 0.00506966 lowCoverage 0.253483 lowCoverage 0.818391 0.7500000 0.09253559 5 0.817227 0.721150 0.0960772 0.00493405 0.9488108 weaklyHypermeth 0.352432 1.00000 insignificant 0.00061549 0.9996908 weaklyHypermeth 0.25854 1 insignificant 0.14469664 0.0270685 lowCoverage 1.00000 lowCoverage 0.7093426 0.7500000 -2.5662e-02 5 0.7118573 0.7211501 -0.0092928 0.39247 6.3167e-02 insignificant 1 8.3025e-01 insignificant 0.68347 4.7290e-01 insignificant 1 1.00000000 insignificant -0.0019135 0.9736233 lowCoverage 1.00000 lowCoverage chr12 102889913 102890913 42493 TDG ENSG00000139372 0.862448 188 5 0.7927189 87 5 0.347222 20 0 0.7741667 107 5 1.0000000 2 0 0.710630 114 5 0.583333 9 0 0.8976865 83 5 1.0000000 6 0 0.760000 29 5 0.863521 125 5 0.600000 10 0 0.8545455 89 5 NA 0 0 0.9000000 26 3 NA 0 0 0.675000 9 1 0.7973300 153 5 0.895590 63 5 0.888615 85 5 0.833333 11 0 0.845076 70 5 0.750000 25 2 0.9523810 35 5 0.832684 48 5 0.899816 148 5 0.846111 56 5 NA 0 0 0.8830085 76 5 0.926870 171 5 0.831364 180 5 0.792000 175 5 0.7212121 55 5 0.7384615 55 5 0.8250000 40 2 1.0000000 9 0 0.7333333 10 0 0.797930 143 5 0.9166667 32 2 0.840102 166 5 0.859394 111 5 0.8333333 13 0 0.743182 68 5 0.668594 0.5069444 0.2916667 0.7166667 1.0000000 0.707895 0.5000000 0.6930596 1.0000000 0.6666667 0.7105263 0.500000 0.6363636 NA 0.7500000 NA 0.675000 0.745833 0.9532609 0.760000 1.0000000 0.6439394 1.000000 0.8571429 0.7142857 0.8639184 0.6708333 NA 0.763077 0.8484257 0.8909091 0.7800000 0.6636364 0.3461538 0.8250000 NA 0.5833333 0.7907801 0.7916667 0.7030116 0.6818182 1.0000000 0.7954545 0 0.787552 0.852261 -0.06658258 5 0.779260 0.778050 0.0012092 0.91440181 0.01583694 weaklyHypometh 1.000000 1.00000 insignificant 0.924753 0.09791942 insignificant 1 1.00000 insignificant -0.0648318 0.1356038 lowCoverage 1.00000 lowCoverage 0.787552 0.7948718 -0.0157309 5 0.779260 0.6949959 0.0842637 7.5016e-01 0.555922 insignificant 1.0000e+00 1 insignificant 7.3538e-01 0.23969 insignificant 1.0000e+00 1 insignificant -0.0136112 8.1577e-01 lowCoverage 1.0000000 lowCoverage 0.787552 0.7974359 -0.0253897 5 0.779260 0.701280 0.07797962 6.1375e-01 0.54900066 insignificant 1.0000e+00 1.00000 insignificant 0.89921832 0.20833112 insignificant 1.000000 1.000000 insignificant -0.0494907 0.30864330 lowCoverage 1.000000 lowCoverage 0.852261 0.7948718 0.0572483 5 0.778050 0.6949959 0.0830545 2.4823e-01 0.78603 insignificant 1.0000e+00 1 insignificant 3.1954e-01 0.66390 insignificant 1.0000e+00 1 insignificant 0.0512206 0.30661003 lowCoverage 1.000000 lowCoverage 0.852261 0.7974359 0.05160176 5 0.778050 0.701280 0.0767704 0.03510547 0.9234132 weaklyHypermeth 1.000000 1.00000 insignificant 0.74438544 0.8066546 insignificant 1.00000 1 insignificant 0.01534114 0.6561237 lowCoverage 1.00000 lowCoverage 0.7948718 0.7974359 -9.2493e-03 5 0.6949959 0.7012799 -0.0062840 0.42107 9.0294e-01 insignificant 1 1.0000e+00 insignificant 0.81736 8.0232e-01 insignificant 1 1.00000000 insignificant -0.0358794 0.5023044 lowCoverage 1.00000 lowCoverage chr12 103170013 103171013 42502 ENSG00000222492 0.794595 73 5 0.6714286 57 5 0.733333 30 5 0.6047368 55 2 0.6412698 40 5 0.745338 63 5 0.895238 29 1 0.8079365 50 5 0.7250000 24 1 0.914286 34 5 0.809588 150 5 0.875000 8 1 0.8464286 43 5 0.675000 30 5 0.8746032 50 5 0.750000 8 1 0.916667 10 0 0.7743764 76 6 0.766667 27 4 0.727965 60 5 0.800000 5 0 1.000000 8 0 0.533333 31 1 1.0000000 29 4 0.707246 35 1 0.560526 84 4 0.758333 31 5 0.611111 13 0 0.9115385 42 1 0.715556 43 5 0.642593 44 5 0.850379 54 5 0.7952325 89 5 0.6686869 47 5 0.6380952 68 5 0.4000000 5 0 0.6650794 42 5 0.795918 41 5 0.7352381 57 5 0.840909 54 5 0.787500 68 5 0.9933333 38 1 0.847312 67 5 0.845560 0.7571429 0.7619048 0.7101504 0.7523810 0.701382 0.8761905 0.8424036 0.7678571 0.9387755 0.8183569 NA 0.8903061 0.914286 0.8900227 0.8167646 0.928571 0.886492 0.8333333 0.796245 0.8142168 1.0000000 0.666667 1.0000000 0.7536232 0.8462406 0.8654762 0.957074 0.881868 0.7396825 0.8365079 0.8360390 0.7638790 0.6075036 0.7809524 0.28571429 0.7047619 0.7959184 0.7945578 0.8733766 0.8303571 0.9857143 0.8632873 0 0.808070 0.794749 -0.00068415 5 0.603175 0.678101 -0.0749257 0.06680939 0.65791065 insignificant 1.000000 1.00000 insignificant 0.737109 0.44891197 insignificant 1 1.00000 insignificant 0.0199215 0.6976570 lowCoverage 1.00000 lowCoverage 0.808952 0.7054795 0.0916932 5 0.670195 0.7551450 -0.0849500 5.6759e-03 0.987287 weaklyHypermeth 9.4599e-02 1 weaklyHypermeth 8.3080e-02 0.96968 insignificant 1.0000e+00 1 insignificant 0.1169707 1.0884e-01 lowCoverage 1.0000000 lowCoverage 0.811870 0.8697183 -0.0324797 5 0.781351 0.821333 -0.03998236 9.0091e-01 0.27301200 insignificant 1.0000e+00 1.00000 insignificant 0.88072392 0.28022341 insignificant 1.000000 1.000000 insignificant -0.0633857 0.23316066 lowCoverage 1.000000 lowCoverage 0.794258 0.7054795 0.0916482 5 0.642335 0.7551450 -0.1128103 9.5539e-02 0.75902 insignificant 1.0000e+00 1 insignificant 4.5998e-02 0.91228 weaklyHypermeth 8.2140e-01 1 insignificant 0.0970493 0.22176440 lowCoverage 1.000000 lowCoverage 0.808458 0.8697183 -0.02707984 5 0.796202 0.821333 -0.0251310 0.90894826 0.2580801 insignificant 1.000000 1.00000 insignificant 0.60977575 0.8417198 insignificant 1.00000 1 insignificant -0.08330715 0.2106856 lowCoverage 1.00000 lowCoverage 0.7042254 0.8697183 -1.3061e-01 5 0.6925943 0.8213333 -0.1287391 0.99988 5.1976e-03 weaklyHypometh 1 1.1888e-01 insignificant 0.99977 4.2123e-03 weaklyHypometh 1 0.15652034 insignificant -0.1803564 0.0369392 lowCoverage 0.99836 lowCoverage chr12 103195213 103196213 42504 RPL18AP3 ENSG00000218754 0.842442 284 10 0.7374060 200 12 0.687280 204 13 0.7490911 176 9 0.6362193 145 11 0.690763 307 12 0.715477 216 11 0.8183754 178 11 0.7129662 140 9 0.795308 151 10 0.787490 382 11 0.810744 131 9 0.8157386 211 11 0.745791 63 5 0.7688005 174 10 0.836657 66 5 0.581409 154 10 0.8805730 138 7 0.826635 139 5 0.832671 220 10 0.675758 97 7 0.859258 93 5 0.750139 228 12 0.7253472 112 8 0.843992 116 11 0.736086 224 11 0.776442 146 6 0.709259 158 4 0.6834345 190 9 0.755387 208 12 0.690851 223 11 0.755922 292 12 0.6134262 237 13 0.6190441 162 10 0.5726066 217 11 0.7834776 116 10 0.7014936 180 9 0.631966 178 12 0.7221521 234 9 0.864683 276 11 0.774286 228 11 0.8423776 198 6 0.722710 290 11 0.833588 0.7292740 0.7667795 0.8068292 0.8506896 0.799036 0.7728321 0.8298313 0.7611214 0.8452611 0.8595250 0.845054 0.8232676 0.879213 0.8676415 0.8297177 0.792659 0.859483 0.8485029 0.858227 0.7350427 0.8518443 0.822711 0.8016159 0.8798990 0.8185159 0.8495492 0.771581 0.789125 0.8525057 0.8614340 0.7967468 0.7392782 0.6662123 0.7530042 0.82588268 0.7628987 0.8309389 0.8107110 0.8689207 0.8280577 0.8492039 0.8345392 5 0.808372 0.811420 0.00718719 11 0.712227 0.649309 0.0629182 0.40293136 0.88147061 insignificant 1.000000 1.00000 insignificant 0.604547 0.81694418 insignificant 1 1.00000 insignificant 0.0167688 0.4892242 insignificant 1.00000 insignificant 0.808372 0.7146789 0.0661495 11 0.712227 0.5608139 0.1514130 7.3194e-10 0.999842 weaklyHypermeth 3.8523e-08 1 weaklyHypermeth 7.8783e-05 0.99960 weaklyHypermeth 5.2522e-03 1 weaklyHypermeth 0.1099228 1.4095e-02 weaklyHypermeth 0.5033888 insignificant 0.810420 0.8230016 -0.0203586 11 0.777032 0.814664 -0.03763208 8.4684e-01 0.00088470 weaklyHypometh 1.0000e+00 0.14757 insignificant 0.76647715 0.03838264 weaklyHypometh 1.000000 1.000000 insignificant -0.0216499 0.54699602 insignificant 1.000000 insignificant 0.811420 0.7146789 0.0585528 11 0.649309 0.5608139 0.0884948 9.3751e-05 1.00000 weaklyHypermeth 2.8409e-03 1 weaklyHypermeth 2.2573e-03 0.99996 weaklyHypermeth 8.0619e-02 1 weaklyHypermeth 0.0931540 0.02979345 weaklyHypermeth 0.692871 insignificant 0.812200 0.8230016 -0.02628477 11 0.735883 0.814664 -0.0787806 0.99552057 0.0037768 weaklyHypometh 1.000000 0.41965 insignificant 0.96808488 0.1570678 insignificant 1.00000 1 insignificant -0.03841873 0.2982864 insignificant 1.00000 insignificant 0.7154696 0.8230016 -8.2639e-02 11 0.5689224 0.8146638 -0.2457414 0.99993 4.7275e-07 weaklyHypometh 1 3.9396e-05 weaklyHypometh 0.99977 1.9901e-03 weaklyHypometh 1 0.11055849 insignificant -0.1315727 0.0135836 weaklyHypometh 0.58097 insignificant chr12 104590813 104591813 42569 APPL2 ENSG00000136044 0.806008 190 7 0.7224790 139 7 0.779685 85 6 0.7967224 111 7 0.6558346 63 7 0.795747 230 7 0.812616 80 6 0.7877193 105 7 0.6867609 75 6 0.774660 81 6 0.821112 219 7 0.904762 29 4 0.8849954 109 7 0.750000 22 2 0.8100353 83 7 0.594444 50 4 0.719093 41 4 0.8386773 124 7 0.715140 119 5 0.756917 318 7 0.810168 49 4 0.910275 65 5 0.839319 120 5 0.5417989 68 6 0.928571 31 3 0.816893 206 7 0.637132 97 5 0.813616 43 3 0.8516139 98 7 0.782026 200 7 0.779654 140 7 0.769474 283 7 0.7125327 104 7 0.7903869 77 7 0.7639336 126 7 0.8313853 59 4 0.7252127 81 7 0.783367 181 7 0.7735700 210 7 0.840917 217 7 0.784755 114 7 0.7914569 131 6 0.844344 183 7 0.818903 0.7742102 0.7380721 0.8218882 0.7030891 0.825734 0.8397852 0.7716953 0.8030597 0.8477846 0.8321955 0.885004 0.8825135 0.821396 0.8434017 0.7548043 0.748641 0.812697 0.7815897 0.787485 0.8274697 0.8992265 0.807339 0.7468806 0.9153298 0.8448789 0.7731984 0.910523 0.838143 0.8256260 0.7993142 0.7918505 0.7303089 0.7879352 0.7589501 0.75814293 0.8423102 0.7950358 0.8168001 0.8798440 0.8628104 0.8319622 0.8415025 4 0.797184 0.810000 -0.00102907 7 0.750076 0.732229 0.0178467 0.40014384 0.86619913 insignificant 1.000000 1.00000 insignificant 0.741477 0.67033657 insignificant 1 1.00000 insignificant -0.0193747 0.5889063 insignificant 1.00000 insignificant 0.797268 0.7627389 0.0432116 7 0.785823 0.7502025 0.0356203 4.2056e-04 0.907284 weaklyHypermeth 9.7806e-03 1 weaklyHypermeth 2.4902e-02 0.78555 weaklyHypermeth 5.1879e-01 1 insignificant 0.0028673 9.0824e-01 insignificant 1.0000000 insignificant 0.797446 0.8245614 -0.0312822 7 0.812595 0.835587 -0.02299225 8.6593e-01 0.20898848 insignificant 1.0000e+00 1.00000 insignificant 0.52271596 0.21220230 insignificant 1.000000 1.000000 insignificant -0.0363381 0.12282823 insignificant 1.000000 insignificant 0.811334 0.7627389 0.0451571 7 0.784137 0.7502025 0.0339346 3.2281e-03 0.96394 weaklyHypermeth 6.3295e-02 1 weaklyHypermeth 1.8270e-02 0.99028 weaklyHypermeth 3.9939e-01 1 insignificant 0.0222420 0.54397196 insignificant 1.000000 insignificant 0.811470 0.8245614 -0.03113266 7 0.811120 0.835587 -0.0244672 0.99090215 0.2077842 insignificant 1.000000 1.00000 insignificant 0.83499899 0.6554316 insignificant 1.00000 1 insignificant -0.01696342 0.6292787 insignificant 1.00000 insignificant 0.7627389 0.8243560 -7.3432e-02 7 0.7502025 0.8120996 -0.0618972 0.99621 5.3494e-03 weaklyHypometh 1 1.1888e-01 insignificant 0.97125 3.2815e-02 weaklyHypometh 1 0.65630402 insignificant -0.0392054 0.1268484 insignificant 1.00000 insignificant chr12 105949013 105950013 42607 CRY1 ENSG00000008405 0.704091 224 6 0.7273019 124 6 0.630015 142 6 0.6893286 123 6 0.6598789 65 6 0.777519 319 6 0.712988 94 6 0.7123016 95 6 0.6796360 129 6 0.727561 78 6 0.657198 151 6 0.688462 79 6 0.6691840 148 6 1.000000 6 1 0.7558875 117 6 0.627611 69 6 0.630303 107 6 0.7014409 135 6 0.727314 135 6 0.754862 220 6 0.795094 50 6 0.873792 61 4 0.711029 142 6 0.7808236 96 5 0.772283 56 5 0.767309 184 5 0.660910 80 5 0.745370 45 5 0.7674059 108 6 0.754701 205 6 0.732353 175 5 0.748465 338 6 0.5956323 158 6 0.6286380 87 6 0.5804197 171 5 0.7361838 52 5 0.7057540 91 6 0.669344 175 6 0.7938746 221 6 0.637147 165 6 0.740364 183 6 0.7542390 168 6 0.758437 151 6 0.726516 0.7579927 0.6245834 0.7308669 0.7094464 0.795129 0.7476596 0.7395470 0.7034582 0.7440591 0.6966436 0.698739 0.6769104 NA 0.7689264 0.6240612 0.620282 0.738650 0.7390523 0.791096 0.8089314 0.8420526 0.767384 0.8111717 0.8101641 0.7854519 0.6413166 0.785072 0.812301 0.7907338 0.7493075 0.7781659 0.5868866 0.5849029 0.6507583 0.74835936 0.7076461 0.6740074 0.8103328 0.6447963 0.7792118 0.7933413 0.8106086 4 0.723828 0.770779 -0.04792645 6 0.706246 0.748856 -0.0426099 0.95701896 0.00622495 weaklyHypometh 1.000000 0.77812 insignificant 0.987444 0.00136919 weaklyHypometh 1 0.45640 insignificant -0.0474838 0.0489395 weaklyHypometh 1.00000 insignificant 0.723828 0.6416894 0.0663422 6 0.706246 0.6494742 0.0567722 1.9455e-04 0.903368 weaklyHypermeth 4.7452e-03 1 weaklyHypermeth 8.8062e-03 0.74690 weaklyHypermeth 2.3196e-01 1 insignificant 0.0589822 8.4244e-02 insignificant 1.0000000 insignificant 0.723828 0.7747748 -0.0397677 6 0.706246 0.734917 -0.02867054 6.1629e-01 0.01768124 weaklyHypometh 1.0000e+00 0.55254 insignificant 0.87395533 0.00526905 weaklyHypometh 1.000000 0.479005 insignificant -0.0251683 0.45292495 insignificant 1.000000 insignificant 0.770779 0.6416894 0.1189366 6 0.748856 0.6494742 0.0993821 8.2240e-07 0.99290 weaklyHypermeth 3.9138e-05 1 weaklyHypermeth 3.2814e-04 0.99888 weaklyHypermeth 2.1876e-02 1 weaklyHypermeth 0.1064660 0.00588334 weaklyHypermeth 0.269780 insignificant 0.770779 0.7747748 0.01165582 6 0.748856 0.734917 0.0139394 0.38464905 0.3004282 insignificant 1.000000 1.00000 insignificant 0.48017942 0.4091718 insignificant 1.00000 1 insignificant 0.02231549 0.4854965 insignificant 1.00000 insignificant 0.6416894 0.7747748 -1.0444e-01 6 0.6494742 0.7349170 -0.0854428 0.98847 1.2024e-03 weaklyHypometh 1 3.5364e-02 weaklyHypometh 0.97998 6.2863e-03 weaklyHypometh 1 0.19644674 insignificant -0.0841505 0.0475176 weaklyHypometh 1.00000 insignificant chr12 107609313 107610313 42638 SELPLG ENSG00000110876 0.185240 337 5 0.2919635 254 5 0.141052 144 5 0.1431558 312 5 0.2135854 92 5 0.141091 391 5 0.219081 154 5 0.0591884 174 5 0.0792607 106 5 0.073077 102 5 0.132523 249 5 0.050000 37 3 0.0000000 125 4 0.250000 17 2 0.0827273 141 5 0.000000 36 3 0.000000 24 4 0.0949921 279 5 0.027085 201 5 0.044301 272 5 0.373219 104 5 0.000000 147 4 0.127093 126 5 0.0979798 104 5 0.143924 193 4 0.061712 374 5 0.232886 115 5 0.030303 50 3 0.2016213 195 5 0.035361 356 5 0.044136 328 5 0.166031 321 5 0.0026316 204 5 0.0032787 142 5 0.0000000 171 2 0.0000000 134 4 0.0095549 136 5 0.000000 281 5 0.0021097 476 5 0.030000 387 5 0.028571 342 5 0.0069767 333 5 0.038315 406 5 0.093208 0.0481429 0.1151611 0.0712498 0.0377869 0.083444 0.0323911 0.0470387 0.0473634 0.0393239 0.0831156 0.016816 0.0000000 0.057551 0.0316347 0.0237002 0.023700 0.054346 0.0162809 0.020396 0.1601127 0.0243519 0.073013 0.0530416 0.0545041 0.0362054 0.0537729 0.012230 0.034090 0.0246178 0.0264604 0.0943856 0.0042483 0.0056605 0.0000000 0.00051742 0.0091020 0.0000000 0.0043708 0.0100897 0.0096092 0.0112629 0.0194221 4 0.060087 0.052217 0.00781188 5 0.348585 0.195401 0.1531837 0.55865754 0.97434373 insignificant 1.000000 1.00000 insignificant 0.877719 0.81509378 insignificant 1 1.00000 insignificant -0.0147727 0.6886631 lowCoverage 1.00000 lowCoverage 0.059576 0.0037453 0.0595877 5 0.242557 0.0026049 0.2399525 3.4276e-07 1.000000 weaklyHypermeth 1.3711e-05 1 weaklyHypermeth 3.3475e-05 1.00000 weaklyHypermeth 2.5750e-03 1 weaklyHypermeth 0.1088386 1.9243e-05 lowCoverage 0.0032072 lowCoverage 0.059029 0.0077160 0.0464053 5 0.242557 0.017741 0.22481644 3.5164e-05 1.00000000 weaklyHypermeth 4.3954e-03 1.00000 weaklyHypermeth 0.00090975 0.99999402 weaklyHypermeth 0.179140 1.000000 insignificant 0.0902215 0.00022083 lowCoverage 0.055207 lowCoverage 0.051889 0.0037453 0.0513485 5 0.177201 0.0026049 0.1745964 5.3048e-05 0.99999 weaklyHypermeth 1.8292e-03 1 weaklyHypermeth 9.8022e-06 1.00000 weaklyHypermeth 1.6337e-03 1 weaklyHypermeth 0.1236113 0.00202740 lowCoverage 0.127984 lowCoverage 0.051080 0.0077160 0.03714927 5 0.066090 0.017741 0.0483493 0.00373792 0.9999989 weaklyHypermeth 0.311493 1.00000 insignificant 0.00077563 0.9999997 weaklyHypermeth 0.25854 1 insignificant 0.10499421 0.0059937 lowCoverage 0.59836 lowCoverage 0.0037488 0.0077200 -9.3687e-03 5 0.0031258 0.0212891 -0.0181632 0.99610 3.1680e-01 insignificant 1 1.0000e+00 insignificant 0.99687 4.8648e-01 insignificant 1 1.00000000 insignificant -0.0186171 0.0559069 lowCoverage 1.00000 lowCoverage chr12 108076113 108077113 42656 ACACB ENSG00000076555 0.080464 890 32 0.0897895 1124 32 0.062128 1144 29 0.1282851 597 30 0.0740029 690 25 0.099841 1161 33 0.064166 1539 32 0.0898395 921 30 0.0480199 1175 29 0.033333 969 29 0.127086 1154 34 0.035562 1459 29 0.0652568 1285 29 0.800000 5 0 0.0074518 1366 29 0.095460 1234 29 0.041236 1371 29 0.0846985 380 26 0.126564 763 29 0.100643 1231 32 0.126202 412 25 0.042184 369 22 0.101254 1055 32 0.1388305 394 28 0.073319 271 26 0.143889 1453 32 0.087869 565 32 0.029117 248 22 0.1161477 787 30 0.091887 1463 32 0.093713 1415 29 0.127065 1307 32 0.0652755 1185 32 0.0083151 810 29 0.0481283 388 12 0.0732356 437 25 0.0931081 375 29 0.069068 1158 32 0.0868911 1158 32 0.064178 1390 32 0.063220 922 32 0.0050911 964 29 0.113327 955 32 0.008067 0.0073323 0.0081761 0.0062044 0.0136647 0.020423 0.0033805 0.0095222 0.0036976 0.0017903 0.0140695 0.003454 0.0066677 NA 0.0085150 0.0052226 0.014718 0.011652 0.0112802 0.015620 0.0303071 0.0070824 0.023786 0.0250343 0.0065980 0.0094479 0.0134652 0.024808 0.012555 0.0073094 0.0174267 0.0086527 0.0012978 0.0100757 0.0147994 0.00564536 0.0376500 0.0072148 0.0077841 0.0049799 0.0076433 0.0044113 0.0157606 20 0.032115 0.048876 -0.00439702 32 0.118945 0.123064 -0.0041197 0.29205395 0.17262395 insignificant 1.000000 1.00000 insignificant 0.366807 0.48940986 insignificant 1 1.00000 insignificant 0.0150683 0.6982553 insignificant 1.00000 insignificant 0.032115 0.0464048 0.0082923 32 0.118945 0.0695247 0.0494198 1.9719e-02 0.893178 weaklyHypermeth 2.8999e-01 1 insignificant 2.5347e-01 0.99221 insignificant 1.0000e+00 1 insignificant 0.0531696 1.8383e-01 insignificant 1.0000000 insignificant 0.032115 0.0840601 0.0055269 32 0.118945 0.090915 0.02802986 1.2758e-01 0.99958730 insignificant 1.0000e+00 1.00000 insignificant 0.43499866 0.99677347 insignificant 1.000000 1.000000 insignificant 0.0461498 0.27215209 insignificant 1.000000 insignificant 0.048876 0.0464048 0.0170789 32 0.123064 0.0695247 0.0535395 1.0315e-02 0.63967 weaklyHypermeth 1.6637e-01 1 insignificant 2.0333e-01 0.83166 insignificant 1.0000e+00 1 insignificant 0.0381014 0.03193987 weaklyHypermeth 0.719226 insignificant 0.048876 0.0840601 0.01214244 32 0.123064 0.090915 0.0321496 0.27622010 0.9998723 insignificant 1.000000 1.00000 insignificant 0.58749388 0.9998187 insignificant 1.00000 1 insignificant 0.03108158 0.1776375 insignificant 1.00000 insignificant 0.0464048 0.0840601 -8.2144e-03 32 0.0695247 0.0909147 -0.0213900 0.95343 6.9246e-01 insignificant 1 1.0000e+00 insignificant 0.99552 8.6483e-01 insignificant 1 1.00000000 insignificant -0.0070198 0.7526762 insignificant 1.00000 insignificant chr12 109174713 109175713 42682 IFT81 ENSG00000122970 0.814179 332 10 0.6757862 361 10 0.692727 267 10 0.8209396 340 10 0.7617244 128 10 0.761400 455 10 0.737271 161 10 0.7923847 261 10 0.6808962 218 10 0.837103 166 10 0.780627 386 10 0.649236 155 10 0.8143090 312 10 0.853933 182 5 0.7475390 343 10 0.680159 84 10 0.476429 82 5 0.7517595 320 10 0.782602 243 10 0.837290 291 10 0.725000 52 9 0.741619 119 9 0.735076 327 10 0.7186299 128 6 0.758100 83 6 0.759016 365 10 0.603746 93 5 0.754569 92 7 0.7713521 200 10 0.737275 435 10 0.763831 334 10 0.770160 484 10 0.4400809 315 10 0.3965781 121 10 0.7032223 300 10 0.5720047 70 5 0.4715610 269 10 0.647709 299 10 0.8452829 374 10 0.716565 372 10 0.783710 271 10 0.7152320 288 10 0.760998 348 10 0.847344 0.6728563 0.7029728 0.8504240 0.7898992 0.790216 0.7809489 0.8049744 0.7040241 0.8599511 0.8306864 0.625833 0.8561212 0.798217 0.7885896 0.7186597 0.497178 0.785073 0.8195416 0.868215 0.7741747 0.7229952 0.777512 0.7766448 0.8300435 0.8062838 0.6567099 0.784832 0.825874 0.7825582 0.8074719 0.8014156 0.4023113 0.3628972 0.7090477 0.55067175 0.4468540 0.6622547 0.8515419 0.6984278 0.8054153 0.6851491 0.7619474 5 0.787498 0.796460 -0.00242479 10 0.759380 0.752396 0.0069848 0.22656057 0.55589524 insignificant 1.000000 1.00000 insignificant 0.084303 0.31282308 insignificant 1 1.00000 insignificant 0.0108836 0.6480240 insignificant 1.00000 insignificant 0.787498 0.5305677 0.2585117 10 0.759380 0.5417163 0.2176640 1.5232e-19 0.999958 hypermethylated 3.0464e-17 1 hypermethylated 1.0610e-07 0.99947 hypermethylated 3.5368e-05 1 hypermethylated 0.2088887 6.5561e-03 weaklyHypermeth 0.2731693 insignificant 0.787498 0.7475787 0.0036423 10 0.759380 0.769587 -0.01020701 5.0408e-01 0.10932584 insignificant 1.0000e+00 1.00000 insignificant 0.46849835 0.07171118 insignificant 1.000000 1.000000 insignificant -0.0169430 0.59782627 insignificant 1.000000 insignificant 0.796460 0.5305677 0.2547112 10 0.752396 0.5417163 0.2106792 8.1312e-14 0.99999 hypermethylated 1.3552e-11 1 hypermethylated 3.3569e-06 0.99940 hypermethylated 8.3923e-04 1 hypermethylated 0.1980051 0.00940775 weaklyHypermeth 0.361837 insignificant 0.796460 0.7475787 -0.00046398 10 0.752396 0.769587 -0.0171918 0.23419530 0.0024164 weaklyHypometh 1.000000 0.30206 insignificant 0.19328271 0.0232115 weaklyHypometh 1.00000 1 insignificant -0.02782654 0.3466013 insignificant 1.00000 insignificant 0.5305677 0.7475787 -2.3421e-01 10 0.5417163 0.7695873 -0.2278711 1.00000 1.6313e-08 hypomethylated 1 2.0392e-06 hypomethylated 0.99974 3.4894e-05 hypomethylated 1 0.01003981 hypomethylated -0.2258317 0.0045167 weaklyHypometh 0.26569 insignificant chr12 109237713 109238713 42693 ATP2A2 ENSG00000174437 0.748731 93 6 0.6857002 108 6 0.646517 95 6 0.8522589 106 6 0.8089932 136 6 0.749483 163 6 0.748475 108 6 0.7363496 127 6 0.7358224 69 6 0.834651 88 6 0.718298 175 6 0.900059 127 6 0.8065678 159 6 0.855122 150 6 0.8861111 121 6 0.869470 114 2 0.888889 41 2 0.8522380 113 6 0.703333 65 6 0.841700 84 6 0.725000 33 4 0.882071 53 5 0.908033 140 6 0.7063492 62 6 0.723611 31 4 0.777359 164 6 0.825577 52 5 0.829167 22 3 0.9160193 133 6 0.788215 104 6 0.671822 90 6 0.739385 148 6 0.8032815 152 6 0.6848485 54 6 0.8499568 157 6 0.7083333 12 0 0.5767429 72 6 0.740053 114 6 0.6832112 74 4 0.789170 101 5 0.695685 95 6 0.8510913 97 6 0.693577 108 6 0.767993 0.7221164 0.6471803 0.8544775 0.8220406 0.774570 0.7798117 0.7679974 0.7492774 0.8529748 0.7514333 0.879707 0.8373578 0.868370 0.9037829 0.8906287 0.907895 0.862120 0.7278509 0.856557 0.7559211 0.8777911 0.919925 0.7424029 0.7162829 0.8021753 0.8176905 0.819079 0.921399 0.7923084 0.7140027 0.7589522 0.8168898 0.6943780 0.8459116 0.73670488 0.5809598 0.7495432 0.6979588 0.8148946 0.7320457 0.8489936 0.7064485 1 0.828724 0.816860 0.01362838 6 0.816927 0.805494 0.0114328 0.34279905 0.72277279 insignificant 1.000000 1.00000 insignificant 0.429773 0.53279889 insignificant 1 1.00000 insignificant 0.0023878 0.9352482 insignificant 1.00000 insignificant 0.828724 0.7771836 0.0506124 6 0.816927 0.7686457 0.0482809 2.0678e-02 0.979141 weaklyHypermeth 2.9968e-01 1 insignificant 4.1389e-02 0.98211 weaklyHypermeth 8.1155e-01 1 insignificant 0.0662357 1.6398e-01 insignificant 1.0000000 insignificant 0.828724 0.8042105 0.0095048 6 0.816927 0.793439 0.02348751 3.0000e-01 0.70894837 insignificant 1.0000e+00 1.00000 insignificant 0.28482441 0.82815298 insignificant 1.000000 1.000000 insignificant 0.0508915 0.21943401 insignificant 1.000000 insignificant 0.816860 0.7771836 0.0383182 6 0.805494 0.7686457 0.0368482 4.1774e-02 0.90855 weaklyHypermeth 5.0943e-01 1 insignificant 6.0096e-02 0.98913 insignificant 9.6930e-01 1 insignificant 0.0638479 0.19616749 insignificant 1.000000 insignificant 0.816860 0.8042105 0.00404525 6 0.805494 0.793439 0.0120547 0.60663895 0.6628935 insignificant 1.000000 1.00000 insignificant 0.47789317 0.8661421 insignificant 1.00000 1 insignificant 0.04850371 0.2668030 insignificant 1.00000 insignificant 0.7771836 0.8042105 -3.7767e-02 6 0.7686457 0.7934392 -0.0247934 0.89655 1.4401e-01 insignificant 1 1.0000e+00 insignificant 0.85611 3.4593e-01 insignificant 1 1.00000000 insignificant -0.0153442 0.7716174 insignificant 1.00000 insignificant chr12 109352013 109353013 42699 ANAPC7 ENSG00000196510 0.768178 506 13 0.8604135 520 11 0.855466 232 10 0.7933017 497 13 0.7050145 286 8 0.754819 675 14 0.702395 194 8 0.8880542 349 9 0.8828570 206 8 0.843995 299 10 0.711690 641 10 0.785959 122 6 0.9432162 377 8 0.890996 169 6 0.7979710 436 8 0.796538 119 6 0.751030 76 6 0.7562801 580 13 0.818121 837 11 0.838782 462 13 0.708283 174 8 0.843149 233 10 0.762030 278 13 0.7319961 168 8 0.735471 109 11 0.797781 618 13 0.792690 378 11 0.572917 253 6 0.8511465 577 11 0.860075 624 13 0.874879 421 13 0.862663 584 14 0.6715177 326 13 0.7275384 230 13 0.8125360 597 13 0.7576923 60 7 0.6881194 286 8 0.748408 481 14 0.7940128 439 13 0.916527 458 13 0.867205 484 13 0.7656023 319 13 0.799723 398 13 0.947717 0.8713953 0.9027579 0.9162465 0.8316832 0.908828 0.8953288 0.9231334 0.8345857 0.9200418 0.8613823 0.718519 0.9109190 0.905023 0.8763130 0.9026870 0.701994 0.927511 0.9256035 0.927750 0.8765317 0.8726168 0.860842 0.8180025 0.9246156 0.9480174 0.9221733 0.812669 0.885609 0.9197464 0.9284360 0.9021864 0.9189727 0.7825451 0.8856147 0.92530534 0.8504281 0.9236282 0.9373886 0.9528208 0.9203992 0.8884048 0.9296405 7 0.879072 0.873444 0.00068701 13 0.710020 0.694429 0.0155902 0.26215239 0.72363900 insignificant 1.000000 1.00000 insignificant 0.177522 0.95074842 insignificant 1 1.00000 insignificant 0.0244971 0.4158993 insignificant 1.00000 insignificant 0.879652 0.8595960 0.0144084 13 0.749465 0.6666517 0.0828135 5.6963e-04 0.056505 weaklyHypermeth 1.2383e-02 1 weaklyHypermeth 8.6287e-03 0.08792 weaklyHypermeth 2.3196e-01 1 insignificant 0.0729519 1.6346e-02 weaklyHypermeth 0.5636633 insignificant 0.879652 0.8932316 -0.0280680 13 0.749465 0.770274 -0.02080928 9.9836e-01 0.05856882 insignificant 1.0000e+00 1.00000 insignificant 0.95506635 0.20626923 insignificant 1.000000 1.000000 insignificant -0.0213602 0.52007988 insignificant 1.000000 insignificant 0.873839 0.8595960 0.0144950 13 0.733009 0.6666517 0.0663572 3.1681e-02 0.65440 weaklyHypermeth 4.1686e-01 1 insignificant 2.3372e-01 0.22392 insignificant 1.0000e+00 1 insignificant 0.0484548 0.15900172 insignificant 1.000000 insignificant 0.873839 0.8932316 -0.02535587 13 0.733009 0.770274 -0.0372656 0.99903701 0.1532467 insignificant 1.000000 1.00000 insignificant 0.99833044 0.0377262 weaklyHypometh 1.00000 1 insignificant -0.04585727 0.2464418 insignificant 1.00000 insignificant 0.8595960 0.8932316 -3.4891e-02 13 0.6666517 0.7702745 -0.1036228 0.85479 4.2519e-02 weaklyHypometh 1 6.2527e-01 insignificant 0.92973 1.3861e-01 insignificant 1 1.00000000 insignificant -0.0943121 0.0264190 weaklyHypometh 0.82168 insignificant chr12 109443013 109444013 42700 RAD9B ENSG00000151164 0.543120 251 6 0.5273954 151 6 0.498479 116 5 0.4881202 199 6 0.7892023 104 5 0.772059 244 7 0.595306 183 6 0.4974545 155 6 0.6438526 137 5 0.723442 152 5 0.619021 255 7 0.654331 71 5 0.4358151 171 5 0.813222 51 5 0.5508238 182 5 0.591116 87 5 0.595977 93 5 0.6430464 158 6 0.611830 148 6 0.704365 186 7 0.717566 66 6 0.732603 81 5 0.543680 162 6 0.6592536 96 7 0.592971 75 5 0.658001 220 7 0.833813 78 5 0.642119 57 5 0.5423645 143 6 0.772404 198 6 0.601474 189 6 0.515933 261 6 0.6839414 157 6 0.4104219 113 5 0.5492655 156 6 0.6411977 53 4 0.6409244 135 7 0.629959 208 6 0.7177830 260 7 0.695010 235 7 0.689140 220 6 0.5996987 187 5 0.757126 241 7 0.826771 0.6763843 0.6683470 0.7441688 0.7869617 0.812630 0.7400413 0.7722689 0.7155189 0.8073990 0.7913054 0.713189 0.7566375 0.842517 0.8150639 0.7932714 0.719038 0.837881 0.7088798 0.834776 0.8587889 0.8043301 0.833384 0.8710646 0.7393162 0.8008829 0.8367383 0.717715 0.790144 0.8382154 0.7399743 0.7877239 0.6865117 0.5451607 0.6851906 0.75998093 0.7704609 0.7147255 0.7910251 0.8291005 0.7741687 0.8026383 0.8909765 4 0.712993 0.733702 -0.02326813 6 0.573076 0.546158 0.0269174 0.78438336 0.02201797 weaklyHypometh 1.000000 1.00000 insignificant 0.942486 0.03702258 weaklyHypometh 1 1.00000 insignificant -0.0361163 0.3378037 insignificant 1.00000 insignificant 0.712993 0.6411192 0.0724178 6 0.573076 0.6536466 -0.0805710 4.8688e-03 0.206966 weaklyHypermeth 8.5418e-02 1 weaklyHypermeth 7.6357e-02 0.55723 insignificant 1.0000e+00 1 insignificant 0.0222805 6.4692e-01 insignificant 1.0000000 insignificant 0.715677 0.7191601 -0.0510568 6 0.628204 0.718633 -0.09042940 9.9656e-01 0.01193400 weaklyHypometh 1.0000e+00 0.44200 insignificant 0.99931813 0.01753224 weaklyHypometh 1.000000 0.792053 insignificant -0.0768528 0.04932545 weaklyHypometh 1.000000 insignificant 0.733702 0.6411192 0.0958223 6 0.546158 0.6536466 -0.1074885 1.0667e-03 0.85427 weaklyHypermeth 2.3190e-02 1 weaklyHypermeth 1.8372e-02 0.92268 weaklyHypermeth 3.9939e-01 1 insignificant 0.0583968 0.26621231 insignificant 1.000000 insignificant 0.734606 0.7191601 -0.02639870 6 0.606842 0.718633 -0.1117906 0.18170851 0.2989272 insignificant 1.000000 1.00000 insignificant 0.77078092 0.6755163 insignificant 1.00000 1 insignificant -0.04073648 0.3095620 insignificant 1.00000 insignificant 0.6406821 0.7191601 -1.2151e-01 6 0.6151629 0.7186331 -0.1034701 0.83547 8.1091e-04 weaklyHypometh 1 2.4573e-02 weaklyHypometh 0.99422 4.7077e-03 weaklyHypometh 1 0.16233431 insignificant -0.0991333 0.0728232 insignificant 1.00000 insignificant chr12 109501913 109502913 42710 RAD9B ENSG00000151164 0.586745 244 6 0.5030229 104 6 0.532051 91 6 0.6388889 118 6 0.5834758 62 6 0.582717 351 6 0.510714 116 6 0.6369048 52 6 0.4805556 70 6 0.618146 73 6 0.553541 125 6 0.568437 84 6 0.6184519 92 6 NA 0 0 0.4588294 100 6 0.682239 61 6 0.534722 68 6 0.5955939 160 6 0.664242 167 6 0.589726 246 6 0.555556 44 6 0.576343 84 6 0.579861 136 6 0.4814815 59 6 0.608586 61 6 0.600009 196 6 0.516534 55 6 0.490260 44 6 0.5236868 87 6 0.572248 159 6 0.663132 165 6 0.584111 377 6 0.4431498 118 6 0.5565858 83 6 0.5292569 164 6 0.5816138 51 6 0.5231481 55 6 0.445887 138 6 0.6243359 216 6 0.595680 191 6 0.622804 194 6 0.6183690 213 6 0.668768 194 6 0.601956 0.5193084 0.5416801 0.6516736 0.5987555 0.596706 0.5267982 0.6509265 0.4923735 0.6318309 0.5698925 0.585999 0.6253240 NA 0.4791667 0.6921833 0.547276 0.612697 0.6789754 0.604743 0.5705818 0.5924870 0.589435 0.5009298 0.6169646 0.6170978 0.5255197 0.506566 0.541154 0.5847508 0.6228163 0.5961147 0.4532383 0.5627213 0.5370048 0.58758053 0.5355649 0.4605771 0.6379753 0.6080745 0.6346296 0.6301593 0.6827397 6 0.591443 0.591405 0.00266498 6 0.578649 0.575869 0.0027793 0.24651293 0.21917250 insignificant 1.000000 1.00000 insignificant 0.068723 0.55931550 insignificant 1 1.00000 insignificant 0.0130864 0.5317947 insignificant 1.00000 insignificant 0.591443 0.5155993 0.0747847 6 0.578649 0.5049980 0.0736505 4.5144e-06 0.989592 weaklyHypermeth 1.5048e-04 1 weaklyHypermeth 5.2388e-03 0.97542 weaklyHypermeth 1.6899e-01 1 insignificant 0.0624634 4.7801e-02 weaklyHypermeth 1.0000000 insignificant 0.591443 0.6150794 -0.0472815 6 0.578649 0.625478 -0.04682973 9.6901e-01 0.01577581 weaklyHypometh 1.0000e+00 0.54399 insignificant 0.97201853 0.02262100 weaklyHypometh 1.000000 0.837815 insignificant -0.0502542 0.01480043 weaklyHypometh 0.548164 insignificant 0.591405 0.5155993 0.0723915 6 0.575869 0.5049980 0.0708712 1.2795e-04 0.99186 weaklyHypermeth 3.7268e-03 1 weaklyHypermeth 7.6741e-02 0.84726 insignificant 1.0000e+00 1 insignificant 0.0493770 0.10845523 insignificant 1.000000 insignificant 0.591405 0.6150794 -0.05006673 6 0.575869 0.625478 -0.0496091 0.99847093 0.0155314 weaklyHypometh 1.000000 0.90731 insignificant 0.99992689 0.0062082 weaklyHypometh 1.00000 1 insignificant -0.06334065 0.0052897 weaklyHypometh 0.59836 insignificant 0.5155993 0.6150794 -1.2192e-01 6 0.5049980 0.6254783 -0.1204803 0.99999 4.4338e-05 weaklyHypometh 1 1.9277e-03 weaklyHypometh 0.99996 3.0990e-03 weaklyHypometh 1 0.14086523 insignificant -0.1127176 0.0032147 weaklyHypometh 0.21431 insignificant chr12 110248013 110249013 42724 ENSG00000221386 0.507317 406 5 0.4793285 200 5 0.480913 128 5 0.5335000 239 5 0.5628571 99 5 0.484149 293 5 0.463574 190 5 0.4395483 186 5 0.5304147 107 5 0.551103 127 5 0.425885 237 5 0.441005 118 5 0.4904154 169 5 0.507619 52 3 0.4421337 166 5 0.501462 61 5 0.410909 142 5 0.5283190 303 5 0.512506 153 5 0.556451 272 5 0.457451 80 5 0.473599 56 5 0.481886 184 5 0.5387302 99 5 0.591703 112 5 0.589756 195 5 0.491824 91 5 0.436263 73 5 0.4780323 167 5 0.453725 168 5 0.530230 156 5 0.499196 327 5 0.4451572 187 5 0.4545334 176 5 0.4783519 141 5 0.4136364 47 5 0.4019777 118 5 0.436762 174 5 0.5391900 273 5 0.501576 300 5 0.582885 260 5 0.5747936 270 5 0.496870 231 5 0.518406 0.4945077 0.4910561 0.5464964 0.5699830 0.495282 0.4756634 0.4464393 0.5393077 0.5597505 0.4375191 0.445822 0.5004293 0.519544 0.4579478 0.5113391 0.426786 0.539545 0.5214217 0.562842 0.4679009 0.4786144 0.492909 0.5473876 0.6005053 0.5961234 0.4989562 0.445146 0.491971 0.4641718 0.5434976 0.5105421 0.4610583 0.4657286 0.4903888 0.41984578 0.4125118 0.4496303 0.5514041 0.5120135 0.5930028 0.5856475 0.5110345 5 0.502741 0.513466 -0.01403767 5 0.490978 0.505794 -0.0148161 0.92285668 0.18338833 insignificant 1.000000 1.00000 insignificant 0.770947 0.40516148 insignificant 1 1.00000 insignificant -0.0093959 0.6024530 lowCoverage 1.00000 lowCoverage 0.502741 0.4317912 0.0485100 5 0.490978 0.4447035 0.0462746 6.4109e-05 0.825410 weaklyHypermeth 1.6871e-03 1 weaklyHypermeth 5.5991e-04 0.95213 weaklyHypermeth 2.7996e-02 1 weaklyHypermeth 0.0540675 3.1338e-03 lowCoverage 0.1633169 lowCoverage 0.502741 0.5577211 -0.0492584 5 0.490978 0.539124 -0.04814613 9.9804e-01 0.02501251 weaklyHypometh 1.0000e+00 0.65905 insignificant 0.99842909 0.03097831 weaklyHypometh 1.000000 1.000000 insignificant -0.0465922 0.05831323 lowCoverage 1.000000 lowCoverage 0.513466 0.4317912 0.0612319 5 0.505794 0.4447035 0.0610907 2.1182e-05 0.97275 weaklyHypermeth 7.5649e-04 1 weaklyHypermeth 6.7372e-04 0.98757 weaklyHypermeth 3.6725e-02 1 weaklyHypermeth 0.0634633 0.00355095 weaklyHypermeth 0.197275 insignificant 0.513466 0.5577211 -0.03444933 5 0.505794 0.539124 -0.0333300 0.93825353 0.0273659 weaklyHypometh 1.000000 1.00000 insignificant 0.97905044 0.0191777 weaklyHypometh 1.00000 1 insignificant -0.03719637 0.1398984 insignificant 1.00000 insignificant 0.4317912 0.5577211 -9.4756e-02 5 0.4447035 0.5391243 -0.0944208 0.99345 1.4984e-05 weaklyHypometh 1 7.8862e-04 weaklyHypometh 0.99946 1.8277e-04 weaklyHypometh 1 0.02712733 weaklyHypometh -0.1006597 0.0020933 weaklyHypometh 0.17946 insignificant chr12 110508113 110509113 42735 SH2B3 ENSG00000111252 0.527892 308 9 0.6842947 179 8 0.558175 147 9 0.5990044 237 8 0.6518519 104 7 0.815085 210 8 0.629254 115 9 0.7969697 113 8 0.7675926 108 8 0.628379 82 8 0.695614 241 8 0.593386 39 3 0.6708195 90 6 0.616314 91 8 0.8505659 124 8 0.708399 84 5 0.645135 1076 3 0.5951547 228 8 0.804985 96 6 0.756812 146 8 0.736111 55 5 1.000000 9 0 0.479813 215 11 0.6941410 69 7 0.765212 129 8 0.582133 276 8 0.778200 67 6 0.680952 33 3 0.6989177 127 8 0.568520 250 9 0.470680 281 10 0.661034 118 6 0.6844334 134 9 0.7006943 137 8 0.6531234 130 9 0.6731602 49 3 0.5965223 116 8 0.631886 286 10 0.6226410 280 10 0.652466 299 10 0.540764 230 7 0.5761507 232 10 0.666788 203 8 0.757735 0.7518664 0.6993287 0.8045311 0.7116667 0.828871 0.8362790 0.8317749 0.8007672 0.7790602 0.8147794 0.840636 0.7203480 0.755712 0.8119616 0.7909622 0.835936 0.763319 0.8455710 0.821651 0.8217802 0.9531585 0.758633 0.6771803 0.7549603 0.7335856 0.7998724 0.738457 0.849274 0.7460573 0.7205173 0.8544752 0.8304350 0.7787867 0.7664417 0.86304886 0.7434045 0.6886638 0.7858166 0.8099059 0.7792342 0.8122617 0.7796394 3 0.803038 0.724201 0.04724351 8 0.630481 0.550202 0.0802794 0.00012346 0.47985177 weaklyHypermeth 0.061732 1.00000 weaklyHypermeth 0.109568 0.12058683 insignificant 1 1.00000 insignificant 0.0034746 0.9413265 insignificant 1.00000 insignificant 0.803197 0.7100939 0.0628274 8 0.641355 0.6358640 0.0054909 1.4224e-03 0.859476 weaklyHypermeth 2.9028e-02 1 weaklyHypermeth 4.2466e-01 0.91986 insignificant 1.0000e+00 1 insignificant 0.0231476 3.8023e-01 insignificant 1.0000000 insignificant 0.803197 0.7347267 0.0290893 8 0.641355 0.637578 0.00377702 2.6192e-01 0.53375234 insignificant 1.0000e+00 1.00000 insignificant 0.67925475 0.54047709 insignificant 1.000000 1.000000 insignificant 0.0680221 0.05244350 insignificant 1.000000 insignificant 0.725985 0.7100939 0.0170520 8 0.596052 0.6358640 -0.0398117 5.7747e-02 0.49362 insignificant 6.7937e-01 1 insignificant 1.3310e-01 0.67443 insignificant 1.0000e+00 1 insignificant 0.0196730 0.66503282 insignificant 1.000000 insignificant 0.725985 0.7347267 -0.02706613 8 0.596052 0.637578 -0.0415256 0.42583862 0.1633296 insignificant 1.000000 1.00000 insignificant 0.16753480 0.6307338 insignificant 1.00000 1 insignificant 0.06454744 0.1975722 insignificant 1.00000 insignificant 0.7100939 0.7347267 -4.4766e-02 8 0.6358640 0.6375779 -0.0017139 0.25334 2.3348e-02 weaklyHypometh 1 3.9109e-01 insignificant 0.54204 3.1718e-01 insignificant 1 1.00000000 insignificant 0.0448745 0.1549712 insignificant 1.00000 insignificant chr12 110864713 110865713 42747 MAPKAPK5 ENSG00000089022 0.784545 49 3 0.7186103 134 5 0.662372 98 5 0.7986928 40 3 0.6581439 39 4 0.766667 100 4 0.692308 32 4 0.6330634 75 4 0.7662338 29 2 0.666667 21 4 0.726407 116 4 0.833333 4 0 0.7166667 29 3 0.579167 29 4 0.6750000 25 2 0.733333 9 1 0.500000 2 0 0.8500000 24 1 0.849379 39 3 0.875069 91 5 0.733974 25 2 0.694444 16 2 0.766667 46 3 0.6335227 33 4 0.916667 10 0 0.769630 147 5 0.821591 45 4 0.648810 27 3 0.9062500 39 3 0.843142 141 5 0.788980 132 5 0.842076 93 5 0.6639007 116 3 0.8333333 12 2 0.8371304 85 4 0.1666667 5 0 0.7312500 42 2 0.706777 114 5 0.8800000 45 3 0.879808 51 4 0.665179 26 3 0.7500000 16 3 0.842484 65 5 0.770202 0.6615688 0.6494190 0.7204067 0.6571970 0.692593 0.6837607 0.6261091 0.7806638 0.6740741 0.7289292 0.756986 0.7222222 0.578704 0.6759259 0.8244950 0.770370 0.847222 0.8326432 0.804127 0.7229345 0.7223898 0.753968 0.6483586 0.9074074 0.7179784 0.8421717 0.609788 0.895833 0.8131716 0.7434249 0.7912429 0.5791098 0.8335892 0.7737923 0.27803363 0.7236111 0.7594119 0.8333333 0.8330662 0.6835317 0.7222222 0.7812273 0 0.741117 0.826260 -0.06173138 4 0.694535 0.745845 -0.0513105 0.87519478 0.00339322 lowCoverage 1.000000 0.56554 lowCoverage 0.798439 0.14210953 lowCoverage 1 1.00000 lowCoverage -0.0561966 0.1117694 lowCoverage 1.00000 lowCoverage 0.741607 0.8048128 -0.0481423 4 0.733442 0.7743468 -0.0409051 8.3302e-01 0.129003 lowCoverage 1.0000e+00 1 lowCoverage 3.1495e-01 0.69855 lowCoverage 1.0000e+00 1 lowCoverage 0.0677732 5.4186e-01 lowCoverage 1.0000000 lowCoverage 0.741607 0.8029557 -0.0857286 3 0.733442 0.844985 -0.11154318 9.9921e-01 0.00047609 lowCoverage 1.0000e+00 0.11902 lowCoverage 0.98550763 0.04663143 lowCoverage 1.000000 1.000000 lowCoverage -0.0792112 0.14141164 lowCoverage 1.000000 lowCoverage 0.827128 0.8048128 0.0212025 5 0.795014 0.7743468 0.0206675 4.0900e-01 0.75691 insignificant 1.0000e+00 1 insignificant 1.6216e-01 0.97071 insignificant 1.0000e+00 1 insignificant 0.1239698 0.28626731 lowCoverage 1.000000 lowCoverage 0.827128 0.8029557 -0.03721153 3 0.795014 0.844985 -0.0499705 0.97238540 0.0072223 lowCoverage 1.000000 0.60186 lowCoverage 0.94500581 0.0302962 lowCoverage 1.00000 1 lowCoverage -0.02301454 0.6560697 lowCoverage 1.00000 lowCoverage 0.8048128 0.8029557 -3.2442e-02 3 0.7743468 0.8449849 -0.0706381 0.93410 9.9831e-02 lowCoverage 1 1.0000e+00 lowCoverage 0.99758 4.2726e-02 lowCoverage 1 0.76297171 lowCoverage -0.1469844 0.2267281 lowCoverage 1.00000 lowCoverage chr12 111277413 111278413 42761 C12orf51 ENSG00000173064 0.655237 350 8 0.6523977 283 8 0.686972 144 8 0.6752189 304 8 0.7107035 154 8 0.686817 359 7 0.702814 151 8 0.7006258 186 8 0.7320544 141 8 0.721563 122 8 0.696761 279 8 0.594886 77 4 0.7106891 203 6 0.723074 90 8 0.8191392 151 6 0.801136 56 6 0.875826 665 4 0.6849249 264 8 0.725587 127 4 0.738162 273 6 0.656944 52 5 0.685252 67 4 0.678852 178 6 0.7242308 103 6 0.618591 101 8 0.662813 243 8 0.671813 91 7 0.768141 94 8 0.6850771 129 8 0.664842 312 8 0.706178 284 8 0.714813 330 8 0.6350164 236 8 0.5850564 112 4 0.7416667 211 8 0.5151515 33 2 0.6808452 165 8 0.701816 218 8 0.6602178 297 8 0.689301 224 8 0.619575 258 8 0.6962719 193 4 0.672019 324 8 0.772405 0.7321159 0.7401851 0.7551261 0.7558113 0.752081 0.7525109 0.7751241 0.8023402 0.7992721 0.7775824 0.712748 0.7937276 0.788174 0.8587742 0.8427152 0.821869 0.774775 0.8212949 0.784398 0.7772259 0.7890253 0.770036 0.8182374 0.7408246 0.7642430 0.7418483 0.841631 0.785248 0.7450730 0.7868423 0.8117781 0.6910977 0.6793432 0.7885210 0.70496606 0.7456987 0.7732194 0.7759124 0.7860083 0.7456987 0.7768386 0.7914177 4 0.796072 0.748488 -0.00168914 8 0.700229 0.693141 0.0070876 0.32110073 0.53242964 insignificant 1.000000 1.00000 insignificant 0.258781 0.68785303 insignificant 1 1.00000 insignificant 0.0282672 0.1194198 insignificant 1.00000 insignificant 0.796072 0.7076923 0.0353463 8 0.700229 0.6841365 0.0160922 4.5962e-03 0.719328 weaklyHypermeth 8.2075e-02 1 weaklyHypermeth 5.9251e-03 0.85169 weaklyHypermeth 1.8516e-01 1 insignificant 0.0714709 9.3010e-02 insignificant 1.0000000 insignificant 0.796072 0.7461420 0.0111458 8 0.700229 0.655447 0.04478179 5.1054e-02 0.68705838 insignificant 1.0000e+00 1.00000 insignificant 0.13850877 0.80265098 insignificant 1.000000 1.000000 insignificant 0.0472526 0.02878969 weaklyHypermeth 0.846756 insignificant 0.748488 0.7076923 0.0321625 8 0.693141 0.6841365 0.0090046 4.7837e-03 0.30509 weaklyHypermeth 8.5423e-02 1 weaklyHypermeth 1.5188e-02 0.57722 weaklyHypermeth 3.6162e-01 1 insignificant 0.0432036 0.27002246 insignificant 1.000000 insignificant 0.748488 0.7461420 0.02869909 8 0.693141 0.655447 0.0376942 0.06224210 0.6573414 insignificant 1.000000 1.00000 insignificant 0.32312652 0.8930060 insignificant 1.00000 1 insignificant 0.01898539 0.3040141 insignificant 1.00000 insignificant 0.7076923 0.7461420 -1.4424e-02 8 0.6841365 0.6554469 0.0286896 0.12226 6.3929e-02 insignificant 1 8.3025e-01 insignificant 0.52990 1.3730e-01 insignificant 1 1.00000000 insignificant -0.0242182 0.5294253 insignificant 1.00000 insignificant chr12 112167113 112168113 42776 TPCN1 ENSG00000186815 0.713161 348 13 0.6516011 244 13 0.681683 149 13 0.6983433 183 13 0.5684291 129 7 0.684121 329 13 0.528061 219 13 0.7344267 198 13 0.5543879 149 11 0.612444 149 11 0.652635 302 13 0.587413 128 11 0.6687974 177 11 0.511905 43 5 0.7235870 227 11 0.698485 94 7 0.648014 926 11 0.7024709 195 11 0.779760 186 11 0.557062 223 11 0.809585 96 12 0.673077 104 11 0.622546 189 13 0.6465934 135 12 0.762503 174 9 0.771613 267 13 0.741619 119 11 0.622189 84 7 0.7625961 147 11 0.722936 183 13 0.618674 262 13 0.714541 370 13 0.6268469 247 13 0.6211468 232 13 0.5943579 236 13 0.7239032 180 13 0.6995456 100 9 0.655295 247 13 0.6605665 342 13 0.699427 374 13 0.781528 314 13 0.8394008 265 11 0.710389 399 13 0.811923 0.8108391 0.7367967 0.8379679 0.6615091 0.767655 0.7007276 0.7946730 0.6593898 0.7996023 0.7410821 0.684835 0.7167624 0.751013 0.8661493 0.7294733 0.765408 0.780727 0.7728491 0.748902 0.8366200 0.7742660 0.674262 0.7909013 0.8365357 0.8472012 0.7734010 0.754125 0.785159 0.8310625 0.7363757 0.7750684 0.7135253 0.7098324 0.6753426 0.82042455 0.7964067 0.6835844 0.7659421 0.7800962 0.8577587 0.8368159 0.8056237 7 0.744672 0.707042 -0.01163397 13 0.643018 0.701862 -0.0588436 0.97704131 0.11460523 insignificant 1.000000 1.00000 insignificant 0.999901 0.00028865 weaklyHypometh 1 0.14432 insignificant -0.0578669 0.0325230 weaklyHypometh 1.00000 insignificant 0.744672 0.6159420 0.0531598 13 0.643018 0.6411278 0.0018904 3.9264e-05 0.988049 weaklyHypermeth 1.1548e-03 1 weaklyHypermeth 1.5047e-01 0.74001 insignificant 1.0000e+00 1 insignificant -0.0056767 8.3267e-01 insignificant 1.0000000 insignificant 0.745748 0.7957497 -0.0357214 13 0.665139 0.733767 -0.06862815 9.9609e-01 0.00568739 weaklyHypometh 1.0000e+00 0.33215 insignificant 0.99996451 0.00075732 weaklyHypometh 1.000000 0.126220 insignificant -0.0904228 0.04372132 weaklyHypometh 1.000000 insignificant 0.707042 0.6159420 0.0647307 13 0.701862 0.6411278 0.0607340 1.0340e-06 0.99843 weaklyHypermeth 4.4956e-05 1 weaklyHypermeth 4.8763e-04 0.99967 weaklyHypermeth 2.8684e-02 1 weaklyHypermeth 0.0521902 0.08474856 insignificant 1.000000 insignificant 0.706824 0.7957497 -0.02119709 13 0.694852 0.733767 -0.0389148 0.97574302 0.1308959 insignificant 1.000000 1.00000 insignificant 0.89841698 0.5948005 insignificant 1.00000 1 insignificant -0.03255590 0.4117689 insignificant 1.00000 insignificant 0.6158192 0.7957497 -8.5515e-02 13 0.6393036 0.7337668 -0.0944631 1.00000 1.0848e-06 weaklyHypometh 1 7.7489e-05 weaklyHypometh 1.00000 2.8289e-03 weaklyHypometh 1 0.13501772 insignificant -0.0847461 0.0603257 insignificant 1.00000 insignificant chr12 112532513 112533513 42785 LHX5 ENSG00000089116 0.061429 76 3 0.0447214 164 4 0.177745 111 5 0.0083333 70 5 0.0222222 97 5 0.095691 216 5 0.012132 131 5 0.0202899 137 5 0.0243243 201 5 0.018190 172 3 0.070442 147 5 0.033566 84 3 0.0600067 101 3 0.025128 91 3 0.0260870 136 3 0.061905 77 5 0.128986 55 3 0.0071429 82 3 0.050000 63 4 0.037558 132 3 0.027778 41 5 0.297241 85 3 0.050831 128 5 0.0183983 138 5 0.023810 31 3 0.025882 171 5 0.012821 122 5 0.032080 68 5 0.1272727 62 4 0.010526 209 5 0.048236 187 5 0.072091 160 5 0.0618012 143 5 0.0153846 32 2 0.0018657 312 4 0.0000000 10 0 0.0092593 127 5 0.016026 102 5 0.0616858 99 5 0.042857 43 4 0.000000 49 4 0.0785714 34 2 0.034783 87 4 0.072464 0.0519417 0.2018550 0.0181159 0.0091097 0.090758 0.0263747 0.0162841 0.0132617 0.0280923 0.0687704 0.044781 0.0458817 0.017981 0.0089117 0.0734990 0.059154 0.013219 0.0170807 0.026679 0.0113872 0.0386751 0.032659 0.0071052 0.0053715 0.0077457 0.0052556 0.073205 0.093450 0.0035959 0.0350600 0.0652143 0.0764883 0.0023889 0.0023893 0.00000000 0.0017253 0.0348384 0.0876276 0.0931677 0.0000000 0.0791925 0.0756144 2 0.049509 0.030980 0.01502736 5 0.042967 0.030775 0.0121914 0.04641122 0.99900656 weaklyHypermeth 1.000000 1.00000 insignificant 0.224022 0.95175083 insignificant 1 1.00000 insignificant -0.0129523 0.6154285 lowCoverage 1.00000 lowCoverage 0.049509 0.0165289 0.0241873 5 0.042967 0.0194418 0.0235250 1.2453e-01 0.987424 insignificant 1.0000e+00 1 insignificant 1.5869e-01 0.87388 insignificant 1.0000e+00 1 insignificant 0.0319056 2.9519e-02 lowCoverage 0.8682149 lowCoverage 0.049509 0.0512821 -0.0111179 4 0.042967 0.042576 0.00039082 4.1340e-01 0.43798115 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.71505329 0.67373014 lowCoverage 1.000000 1.000000 lowCoverage 0.0057156 0.73594346 lowCoverage 1.000000 lowCoverage 0.030980 0.0165289 0.0073317 5 0.030775 0.0194418 0.0113336 4.0900e-01 0.56674 insignificant 1.0000e+00 1 insignificant 2.9932e-01 0.66023 insignificant 1.0000e+00 1 insignificant 0.0448579 0.09565444 lowCoverage 1.000000 lowCoverage 0.030980 0.0512821 -0.02731268 4 0.030775 0.042576 -0.0118006 0.90048312 0.0782744 lowCoverage 1.000000 1.00000 lowCoverage 0.75662088 0.4219786 lowCoverage 1.00000 1 lowCoverage 0.01866791 0.4974214 lowCoverage 1.00000 lowCoverage 0.0165289 0.0512821 -2.9053e-02 4 0.0194418 0.0425761 -0.0231342 0.83008 1.6979e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.78856 2.7288e-01 lowCoverage 1 1.00000000 lowCoverage -0.0261900 0.1476202 lowCoverage 1.00000 lowCoverage chr12 112606913 112607913 42789 LHX5 ENSG00000089116 0.805144 149 5 0.8979592 103 5 0.791257 83 3 0.8859944 71 3 0.6565934 47 3 0.824708 120 5 0.801070 73 3 0.6654762 43 4 0.8870102 89 3 0.892274 78 5 0.893686 152 5 0.665201 45 3 0.8841773 89 3 0.942308 18 1 0.7962672 90 5 0.378367 44 3 0.853030 33 3 0.4896621 88 2 0.578704 101 3 0.805161 118 3 0.490970 52 3 0.752381 50 1 0.692857 65 3 0.7622549 32 2 0.625208 78 3 0.841952 163 5 0.867027 86 3 0.914103 40 3 0.9263175 90 5 0.889815 133 5 0.901118 188 5 0.917016 142 5 0.2613790 141 5 0.4182517 170 5 0.3743322 110 3 0.7169182 68 5 0.3000408 75 5 0.553558 146 5 0.3667190 84 5 0.714286 93 4 0.831126 91 2 0.7860142 135 3 0.439716 70 3 0.794883 0.9314286 0.7692281 0.9152941 0.8015385 0.808387 0.8697326 0.7213966 0.7500182 0.8875724 0.8781705 0.855692 0.9159795 0.795716 0.9077239 0.8754545 0.883455 0.809715 0.8600000 0.900697 0.7593091 0.8285714 0.953143 0.8752941 0.8587500 0.8081873 0.8050221 0.795692 0.836897 0.8046667 0.8556020 0.9483506 0.3679788 0.3736783 0.6304530 0.85415233 0.3526797 0.8019808 0.6381538 0.7614286 0.8064658 0.7566143 0.7395745 1 0.837821 0.848972 -0.00864078 3 0.676868 0.863314 -0.1864463 0.95981551 0.09253467 lowCoverage 1.000000 1.00000 lowCoverage 0.768758 0.26769363 lowCoverage 1 1.00000 lowCoverage -0.0287157 0.5868968 lowCoverage 1.00000 lowCoverage 0.837821 0.4830986 0.3417440 3 0.676868 0.3369444 0.3399236 1.5545e-17 0.999928 lowCoverage 1.9431e-15 1 lowCoverage 5.1370e-07 0.99999 lowCoverage 7.3385e-05 1 lowCoverage 0.3322892 3.0665e-03 lowCoverage 0.1633169 lowCoverage 0.837821 0.7019027 0.1413004 2 0.676868 0.522847 0.15402106 3.0021e-07 0.73124849 lowCoverage 7.5052e-05 1.00000 lowCoverage 0.00021396 0.80907568 lowCoverage 0.078766 1.000000 lowCoverage 0.1421302 0.21385006 lowCoverage 1.000000 lowCoverage 0.848972 0.4830986 0.3641838 5 0.863314 0.3369444 0.5263699 1.8449e-11 1.00000 hypermethylated 1.6772e-09 1 hypermethylated 3.8231e-04 1.00000 hypermethylated 2.3894e-02 1 hypermethylated 0.3610049 0.00178787 lowCoverage 0.127705 lowCoverage 0.848972 0.7019027 0.14287479 2 0.863314 0.522847 0.3404674 0.00057161 0.9962971 lowCoverage 0.081659 1.00000 lowCoverage 0.00790573 0.9637001 lowCoverage 0.71870 1 lowCoverage 0.17084584 0.1502852 lowCoverage 1.00000 lowCoverage 0.4830986 0.7019027 -1.8820e-01 2 0.3369444 0.5228469 -0.1859025 0.99992 1.1987e-02 lowCoverage 1 2.1795e-01 lowCoverage 0.99999 1.8514e-01 lowCoverage 1 1.00000000 lowCoverage -0.1901590 0.1446027 lowCoverage 1.00000 lowCoverage chr12 115162113 115163113 42838 MIR620 ENSG00000207967 0.792583 124 6 0.7009127 113 6 0.702381 63 6 0.7635832 147 6 0.6038591 68 6 0.530266 336 7 0.665851 73 6 0.7680803 114 6 0.6584500 61 6 0.655387 89 6 0.609777 291 6 0.683333 18 2 0.7795815 92 6 0.832738 48 6 0.7484127 60 6 0.694444 15 0 0.675000 22 2 0.7741148 150 6 0.770200 119 6 0.590677 217 7 0.719853 150 2 0.688654 86 6 0.729074 101 6 0.5495238 121 6 0.780556 43 6 0.719940 149 7 0.765300 123 6 0.405782 52 2 0.6513148 90 6 0.693631 113 7 0.704040 119 6 0.875897 274 7 0.6717687 103 7 0.7333333 67 6 0.5661463 162 6 0.4652778 25 2 0.7015873 66 6 0.718365 144 7 0.7703813 128 6 0.773949 168 6 0.765446 109 6 0.7846154 75 6 0.821737 153 6 0.793339 0.6656903 0.6295732 0.8059536 0.7184462 0.743607 0.6889924 0.7454615 0.6596246 0.6881375 0.7514538 0.737805 0.7082563 0.836672 0.7510501 0.6910569 0.696951 0.817531 0.8002494 0.760172 0.7244734 0.8140283 0.671900 0.8227352 0.7776423 0.7205303 0.7676206 0.631277 0.740768 0.7355553 0.6820564 0.8252455 0.6051249 0.7005420 0.7140293 0.50685976 0.7380372 0.6784476 0.7604220 0.8052162 0.8026065 0.7947154 0.8738410 2 0.727928 0.767065 -0.02423907 6 0.553679 0.697087 -0.1434079 0.93332333 0.09375999 insignificant 1.000000 1.00000 insignificant 0.754168 0.42353714 insignificant 1 1.00000 insignificant 0.0096845 0.8040630 insignificant 1.00000 insignificant 0.728256 0.6878307 0.0565367 6 0.615199 0.6491739 -0.0339746 4.2079e-02 0.997210 weaklyHypermeth 5.4648e-01 1 insignificant 8.0708e-02 0.99065 insignificant 1.0000e+00 1 insignificant 0.0572352 2.5956e-01 insignificant 1.0000000 insignificant 0.729779 0.7756714 -0.0650272 6 0.743352 0.808001 -0.06464974 9.9881e-01 0.00635659 weaklyHypometh 1.0000e+00 0.33215 insignificant 0.99838184 0.02073195 weaklyHypometh 1.000000 0.837815 insignificant -0.0832441 0.00047165 weaklyHypometh 0.067379 weaklyHypometh 0.768362 0.6878307 0.0851947 6 0.730097 0.6491739 0.0809231 2.1198e-02 0.98449 weaklyHypermeth 2.9857e-01 1 insignificant 5.2080e-02 0.98731 insignificant 8.9793e-01 1 insignificant 0.0475507 0.40492090 insignificant 1.000000 insignificant 0.769231 0.7756714 -0.04296937 6 0.748220 0.808001 -0.0597813 0.99179237 0.0758603 insignificant 1.000000 1.00000 insignificant 0.99864388 0.0231459 weaklyHypometh 1.00000 1 insignificant -0.09292856 0.0219310 weaklyHypometh 1.00000 insignificant 0.6884956 0.7756714 -1.2747e-01 6 0.6917951 0.8080013 -0.1162062 0.99999 1.0867e-04 weaklyHypometh 1 4.3469e-03 weaklyHypometh 0.99998 6.6013e-04 weaklyHypometh 1 0.05576667 weaklyHypometh -0.1404793 0.0213299 weaklyHypometh 0.79000 insignificant chr12 115356513 115357513 42862 MED13L ENSG00000123066 0.632513 270 7 0.5546016 228 7 0.541547 163 8 0.5482764 215 7 0.5016736 182 10 0.596181 290 10 0.450006 227 10 0.4236345 197 8 0.3109943 196 7 0.492628 151 8 0.519509 348 10 0.346295 181 8 0.3345714 208 8 0.768243 92 5 0.3890952 204 8 0.428139 105 6 0.360766 525 6 0.5009522 198 7 0.368867 108 7 0.452106 267 8 0.731066 90 9 0.523457 69 6 0.562434 219 7 0.5552394 103 7 0.566099 104 6 0.532280 288 8 0.520933 81 7 0.522799 49 6 0.4982209 167 7 0.419131 305 8 0.555708 261 8 0.586867 398 8 0.3638763 205 7 0.2108947 154 7 0.4526856 168 5 0.4795918 57 5 0.4856635 204 8 0.257006 271 8 0.5913145 242 7 0.395444 308 7 0.546383 212 7 0.5727299 225 6 0.366414 198 7 0.584951 0.4690071 0.5102798 0.5553460 0.5021953 0.553132 0.5039637 0.4887865 0.4341797 0.5780979 0.5261241 0.458180 0.4559858 0.524161 0.5258342 0.5492795 0.571903 0.528640 0.4490890 0.482768 0.7224105 0.5279743 0.513480 0.6800470 0.5791189 0.4506360 0.5707931 0.511225 0.481168 0.4195452 0.4530483 0.5729014 0.5014525 0.3431258 0.5106150 0.56563976 0.4453829 0.3463348 0.5623538 0.5374470 0.6196656 0.5513588 0.5798350 5 0.509187 0.492488 0.00583975 8 0.478391 0.522068 -0.0436769 0.75526013 0.10721826 insignificant 1.000000 1.00000 insignificant 0.968673 0.18280920 insignificant 1 1.00000 insignificant -0.0718229 0.0367795 weaklyHypometh 1.00000 insignificant 0.509187 0.3220019 0.1789641 7 0.478391 0.2947105 0.1836802 1.3142e-16 0.999999 weaklyHypermeth 1.4603e-14 1 weaklyHypermeth 2.0784e-05 0.98547 weaklyHypermeth 1.7320e-03 1 weaklyHypermeth 0.1010769 1.0164e-01 insignificant 1.0000000 insignificant 0.509300 0.5097375 -0.0337701 7 0.525810 0.449236 0.07657352 1.2338e-01 0.09541978 insignificant 1.0000e+00 1.00000 insignificant 0.19472648 0.00971991 weaklyHypometh 1.000000 0.607495 insignificant -0.0184269 0.74154705 insignificant 1.000000 insignificant 0.492488 0.3220019 0.1830635 7 0.522068 0.2947105 0.2273570 2.3857e-12 0.99999 weaklyHypermeth 2.6508e-10 1 weaklyHypermeth 8.4335e-05 0.99951 weaklyHypermeth 7.9633e-03 1 weaklyHypermeth 0.1728998 0.01366369 weaklyHypermeth 0.426990 insignificant 0.492726 0.5106022 -0.03643133 7 0.565516 0.449236 0.1162798 0.50299871 0.1127461 insignificant 1.000000 1.00000 insignificant 0.36455643 0.3325275 insignificant 1.00000 1 insignificant 0.05339592 0.3422529 insignificant 1.00000 insignificant 0.3220019 0.5110357 -1.7525e-01 7 0.2947105 0.4941598 -0.1994493 0.99984 2.2674e-07 weaklyHypometh 1 2.0613e-05 weaklyHypometh 0.99985 2.5095e-03 weaklyHypometh 1 0.13207794 insignificant -0.1195039 0.1108054 insignificant 1.00000 insignificant chr12 115357013 115358013 42863 MED13L ENSG00000123066 0.763856 253 9 0.6660605 209 8 0.571187 118 7 0.6233575 244 9 0.6615760 179 10 0.666563 267 11 0.561724 203 11 0.5394154 193 9 0.4842058 135 5 0.625874 112 6 0.656178 310 11 0.575511 111 6 0.5651587 176 9 0.747215 122 9 0.5341716 152 7 0.601010 81 6 0.429973 475 4 0.7189180 241 8 0.526205 113 9 0.696387 187 8 0.689595 88 8 0.655556 57 4 0.640675 169 8 0.5973497 96 9 0.709922 128 5 0.637005 234 8 0.685516 69 6 0.722511 39 4 0.6924495 153 6 0.666349 246 8 0.672207 226 9 0.684405 295 9 0.5377961 218 9 0.4735406 125 7 0.4787847 217 8 0.5238095 36 3 0.6087620 207 7 0.467868 229 9 0.7493209 204 9 0.508615 229 8 0.677894 203 9 0.7332993 179 6 0.632486 199 9 0.730275 0.6134022 0.6251527 0.7170496 0.6367951 0.666747 0.6289742 0.6175742 0.5554898 0.7062849 0.6554946 0.601184 0.6272679 0.671708 0.6786901 0.7151211 0.709731 0.698540 0.6003759 0.631071 0.7601828 0.6962406 0.650152 0.7767678 0.7609108 0.5900539 0.6865466 0.683835 0.623737 0.5897720 0.5801482 0.7198919 0.6549620 0.4951584 0.6633238 0.69579185 0.5767348 0.4757720 0.7303414 0.6940535 0.8018926 0.7185855 0.7418843 3 0.658763 0.667409 0.01002460 9 0.617395 0.657813 -0.0404186 0.59755786 0.13560800 insignificant 1.000000 1.00000 insignificant 0.957335 0.22128768 insignificant 1 1.00000 insignificant -0.0604008 0.0106891 weaklyHypometh 1.00000 insignificant 0.658763 0.4437984 0.1840104 9 0.617395 0.4461405 0.1712541 3.4718e-12 0.999996 weaklyHypermeth 2.0423e-10 1 weaklyHypermeth 2.3625e-03 0.98871 weaklyHypermeth 8.4373e-02 1 weaklyHypermeth 0.0956339 6.0966e-03 weaklyHypermeth 0.2650687 insignificant 0.658851 0.7378352 -0.0627530 9 0.649278 0.615344 0.03393446 9.9894e-01 0.05110270 insignificant 1.0000e+00 1.00000 insignificant 0.95015704 0.01121478 weaklyHypometh 1.000000 0.649395 insignificant -0.0495956 0.33784076 insignificant 1.000000 insignificant 0.667409 0.4437984 0.1868596 9 0.657813 0.4461405 0.2116727 4.9594e-11 0.99996 weaklyHypermeth 4.1329e-09 1 weaklyHypermeth 3.7193e-03 0.99878 weaklyHypermeth 1.2398e-01 1 insignificant 0.1560347 0.00033178 weaklyHypermeth 0.041473 weaklyHypermeth 0.667595 0.7393035 -0.07231867 9 0.686329 0.615344 0.0709849 0.94102043 0.0442496 weaklyHypometh 1.000000 1.00000 insignificant 0.92338910 0.1822063 insignificant 1.00000 1 insignificant 0.01080518 0.8183705 insignificant 1.00000 insignificant 0.4437984 0.7400398 -2.0329e-01 9 0.4461405 0.6712842 -0.2251437 1.00000 2.4149e-08 hypomethylated 1 2.6832e-06 hypomethylated 1.00000 1.7507e-03 weaklyHypometh 1 0.10941940 insignificant -0.1452295 0.0240744 weaklyHypometh 0.79202 insignificant chr12 115497913 115498913 42875 MAP1LC3B2 ENSG00000171471 0.933815 532 11 0.9016814 424 11 0.950629 320 11 0.9341758 301 10 0.7170330 120 10 0.926696 401 10 0.911886 191 11 0.9176745 244 10 0.8080534 212 10 0.928526 301 10 0.873497 387 10 0.889707 207 10 0.8188810 311 10 0.907632 222 11 0.8875133 278 10 0.919780 208 10 0.333333 3 0 0.8953668 421 10 0.954426 431 11 0.879669 314 10 0.769042 147 11 0.961433 116 10 0.896290 258 11 0.8905123 108 11 0.811189 71 8 0.839261 371 10 0.786124 283 10 0.689247 208 10 0.8898593 194 10 0.916865 376 11 0.931582 289 10 0.908222 353 10 0.7711734 320 11 0.8857555 133 11 0.7294372 115 10 0.7750000 39 0 0.7141168 123 11 0.799030 353 10 0.9415529 305 11 0.949173 411 11 0.941511 415 11 0.9481167 394 10 0.918091 184 10 0.934136 0.9059677 0.9389517 0.9366540 0.8895904 0.923835 0.9057622 0.9189312 0.8185125 0.9299489 0.8773237 0.881170 0.8959272 0.892622 0.8892207 0.9327322 0.722195 0.902783 0.9444311 0.880714 0.9031020 0.9592828 0.903168 0.8891245 0.9057033 0.9116989 0.7837018 0.812891 0.894614 0.9106884 0.9417806 0.9136383 0.9187776 0.8694693 0.8342757 0.77770449 0.7494932 0.7951786 0.9545207 0.9464352 0.9511325 0.9514948 0.9249209 10 0.906577 0.887888 0.01688485 10 0.903709 0.748282 0.1554269 0.26379136 0.96074862 insignificant 1.000000 1.00000 insignificant 0.596195 0.78582680 insignificant 1 1.00000 insignificant 0.0070300 0.8555270 insignificant 1.00000 insignificant 0.906422 0.8384118 0.0637978 10 0.867995 0.6713321 0.1966628 6.1051e-05 0.998639 weaklyHypermeth 1.6500e-03 1 weaklyHypermeth 1.9243e-02 0.99462 weaklyHypermeth 4.2762e-01 1 insignificant 0.0854133 4.2753e-02 weaklyHypermeth 1.0000000 insignificant 0.906669 0.9444119 -0.0368170 11 0.907751 0.941216 -0.03346503 9.9962e-01 0.00040736 weaklyHypometh 1.0000e+00 0.11902 insignificant 0.99923659 0.00035371 weaklyHypometh 1.000000 0.117904 insignificant -0.0751903 0.02529063 weaklyHypometh 0.766383 insignificant 0.888528 0.8407407 0.0471315 10 0.805842 0.7229730 0.0828694 6.9452e-03 0.93241 weaklyHypermeth 1.1575e-01 1 insignificant 1.0589e-01 0.98128 insignificant 1.0000e+00 1 insignificant 0.0783834 0.03771404 weaklyHypermeth 0.819870 insignificant 0.889090 0.9444119 -0.05200654 10 0.891753 0.941216 -0.0494629 0.99991861 0.0011982 weaklyHypometh 1.000000 0.30206 insignificant 0.99982038 0.0123510 weaklyHypometh 1.00000 1 insignificant -0.08222029 0.0044681 weaklyHypometh 0.59836 insignificant 0.8430826 0.9444119 -9.8319e-02 10 0.8544227 0.9412162 -0.0867935 0.99911 1.7044e-04 weaklyHypometh 1 6.3126e-03 weaklyHypometh 0.99970 7.8073e-04 weaklyHypometh 1 0.05576667 weaklyHypometh -0.1606037 0.0010341 weaklyHypometh 0.14773 insignificant chr12 115521513 115522513 42878 MAP1LC3B2 ENSG00000171471 0.000000 55 5 0.0944444 127 5 0.000000 149 5 0.0357143 13 0 0.0079365 72 5 0.270175 81 5 0.061737 176 6 0.0079365 108 5 0.0052083 112 7 0.047202 154 5 0.127551 203 5 0.035147 156 5 0.1746032 139 5 0.000000 2 0 0.0000000 148 5 0.019608 105 5 0.018541 147 5 0.0000000 33 3 0.003268 153 5 0.000000 52 5 0.000000 73 5 0.000000 12 1 0.116667 128 5 0.0548611 70 3 0.066667 13 1 0.000000 154 5 0.000000 68 5 0.071429 33 3 0.0222222 84 5 0.294118 144 5 0.000000 125 5 0.023191 77 5 0.2208333 85 5 0.0000000 104 6 NA 0 0 0.0000000 12 0 0.0333333 62 4 0.041667 111 5 0.1234568 57 6 0.051736 81 6 0.064286 29 2 0.0357143 35 3 0.000000 28 3 0.000000 0.0079365 0.0000000 0.0000000 0.0181406 0.078697 0.0127171 0.0066138 0.0049603 0.0170975 0.0029155 0.037500 0.0056689 NA 0.0000000 0.0168067 0.018309 0.000000 0.0074697 0.000000 0.0000000 0.0065193 0.051190 0.0595238 0.0064305 0.0000000 0.0000000 0.000000 0.013228 0.0070028 0.0000000 0.0210266 0.0386905 0.0000000 NA 0.00000000 0.0357143 0.0000000 0.0000000 0.0245256 0.0595238 0.0000000 0.0000000 0 0.019680 0.019388 0.00047758 5 0.054573 0.070937 -0.0163641 0.68979476 0.66492962 insignificant 1.000000 1.00000 insignificant 0.813609 0.69217992 insignificant 1 1.00000 insignificant -0.0086425 0.7699218 lowCoverage 1.00000 lowCoverage 0.019266 0.0268097 -0.0053182 5 0.036394 0.0424206 -0.0060265 6.2031e-01 0.612714 insignificant 1.0000e+00 1 insignificant 6.7399e-01 0.91574 insignificant 1.0000e+00 1 insignificant -0.0137130 7.6867e-01 lowCoverage 1.0000000 lowCoverage 0.019680 0.0350877 0.0029937 3 0.054573 0.026889 0.02768360 6.7620e-01 0.95484326 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.75576084 0.96358980 lowCoverage 1.000000 1.000000 lowCoverage -0.0095850 0.71782455 lowCoverage 1.000000 lowCoverage 0.018424 0.0268097 -0.0064913 5 0.038137 0.0424206 -0.0042836 4.9799e-01 0.64633 insignificant 1.0000e+00 1 insignificant 6.3926e-01 0.81468 insignificant 1.0000e+00 1 insignificant -0.0050705 0.91879282 lowCoverage 1.000000 lowCoverage 0.020387 0.0393013 0.00323510 3 0.163843 0.124200 0.0396429 0.94818117 0.9954871 lowCoverage 1.000000 1.00000 lowCoverage 0.90851330 0.9962810 lowCoverage 1.00000 1 lowCoverage -0.00094249 0.9767062 lowCoverage 1.00000 lowCoverage 0.0268097 0.0352423 2.0756e-05 3 0.0424206 0.0302500 0.0121706 0.90344 8.4681e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.96061 9.5392e-01 lowCoverage 1 1.00000000 lowCoverage 0.0041280 0.9314823 lowCoverage 1.00000 lowCoverage chr12 115580813 115581813 42882 MAP1LC3B2 ENSG00000171471 0.779455 175 6 0.6480769 93 5 0.583509 143 5 0.6799322 124 6 0.6824042 79 5 0.736310 186 6 0.619002 94 5 0.7676653 93 5 0.7058142 112 5 0.641510 91 5 0.739078 178 5 0.697626 90 5 0.7086840 117 5 0.458333 24 1 0.7982053 113 5 0.564712 84 5 0.610916 49 5 0.4324060 178 9 0.749765 109 5 0.774299 166 6 0.925000 48 4 0.612813 61 5 0.622885 128 5 0.7358333 48 3 0.732857 39 4 0.815051 95 5 0.539484 78 4 0.923333 35 2 0.6437500 73 4 0.761405 132 5 0.679739 88 5 0.623883 229 6 0.4745897 92 5 0.4330532 85 5 0.4742857 57 5 0.7428571 27 4 0.6617143 74 4 0.483532 116 5 0.7871377 141 6 0.534037 188 5 0.478134 149 6 0.6761387 123 5 0.587733 194 8 0.736797 0.6871684 0.6233947 0.7746098 0.7444174 0.738075 0.6555500 0.7891213 0.7110529 0.6546581 0.7602888 0.725091 0.7292476 NA 0.7873613 0.5685063 0.625818 0.676309 0.7512643 0.784036 0.9187192 0.5931981 0.704128 0.7311371 0.7344828 0.7515220 0.6022021 0.923399 0.659791 0.7446248 0.7000306 0.7239010 0.4927231 0.4333044 0.4836031 0.69950739 0.6135961 0.4713328 0.6726447 0.6921886 0.5990192 0.6411526 0.5848814 4 0.720808 0.714558 0.00130566 5 0.632228 0.637322 -0.0050933 0.51420044 0.56246100 insignificant 1.000000 1.00000 insignificant 0.809241 0.61458313 insignificant 1 1.00000 insignificant -0.0491176 0.2556618 lowCoverage 1.00000 lowCoverage 0.724153 0.5011086 0.2173346 5 0.694122 0.5129994 0.1811227 5.3513e-13 0.999400 hypermethylated 4.1164e-11 1 hypermethylated 5.3718e-04 0.99796 hypermethylated 2.7996e-02 1 hypermethylated 0.1238799 6.2633e-02 lowCoverage 1.0000000 lowCoverage 0.719077 0.6120907 0.0916649 5 0.608187 0.587724 0.02046250 1.8765e-03 0.24798644 weaklyHypermeth 1.8765e-01 1.00000 insignificant 0.10388903 0.61834866 insignificant 1.000000 1.000000 insignificant 0.0562492 0.38070614 insignificant 1.000000 insignificant 0.717602 0.5011086 0.2209932 5 0.687179 0.5129994 0.1741796 7.7910e-08 0.98085 hypermethylated 4.8694e-06 1 hypermethylated 1.0826e-03 0.99711 weaklyHypermeth 4.7045e-02 1 weaklyHypermeth 0.1729975 0.01982649 lowCoverage 0.508371 lowCoverage 0.714829 0.6131479 0.09317032 5 0.673589 0.646497 0.0270927 0.11860562 0.1502097 insignificant 1.000000 1.00000 insignificant 0.20122125 0.4710052 insignificant 1.00000 1 insignificant 0.10536679 0.1453838 lowCoverage 1.00000 lowCoverage 0.5011086 0.6085791 -1.3242e-01 5 0.5129994 0.6141473 -0.1011479 0.94585 6.2234e-05 weaklyHypometh 1 2.5931e-03 weaklyHypometh 0.97177 4.2260e-03 weaklyHypometh 1 0.15652034 insignificant -0.0676307 0.3904809 lowCoverage 1.00000 lowCoverage chr12 115966113 115967113 42888 FBXW8 ENSG00000174989 0.818331 276 8 0.7146380 392 10 0.692990 178 8 0.9223094 278 9 0.8654196 168 9 0.796414 437 9 0.794278 87 6 0.8812789 287 9 0.7933889 146 9 0.798112 282 9 0.862410 468 9 0.932843 85 4 0.8431328 258 9 0.864243 149 9 0.8194591 215 9 0.368116 43 2 0.213889 20 1 0.8375158 333 8 0.757564 326 9 0.735043 295 8 0.888254 88 9 0.785656 160 8 0.834405 222 10 0.7126133 116 9 0.895570 120 8 0.825609 472 10 0.791956 265 9 0.701429 105 8 0.8859569 322 9 0.900153 537 9 0.880118 428 10 0.833488 445 10 0.8799784 231 9 0.6419082 134 10 0.7345887 321 9 0.4611111 25 2 0.7046614 197 10 0.888730 353 10 0.8832282 160 8 0.890682 267 10 0.717342 189 8 0.7679063 133 9 0.855135 157 8 0.848037 0.7551328 0.7709010 0.9127825 0.8760750 0.814941 0.8025041 0.8690613 0.8028869 0.8696667 0.8617488 0.909804 0.8444809 0.854163 0.8235255 0.5347744 0.400093 0.865232 0.8360143 0.814562 0.8748538 0.7905838 0.840295 0.7024072 0.8979984 0.8427065 0.8176937 0.774884 0.845187 0.8702366 0.8836222 0.8548019 0.8721782 0.5632876 0.8409176 0.59271838 0.6629892 0.8999691 0.8817531 0.8974711 0.8398294 0.8428230 0.8880531 5 0.849672 0.867378 -0.01697817 9 0.786049 0.839964 -0.0539146 0.69020830 0.01666832 weaklyHypometh 1.000000 1.00000 insignificant 0.529010 0.16461007 insignificant 1 1.00000 insignificant -0.0623653 0.1680263 insignificant 1.00000 insignificant 0.849672 0.8342585 0.0133865 9 0.786049 0.8141260 -0.0280767 6.0957e-02 0.428949 insignificant 7.5827e-01 1 insignificant 9.8220e-02 0.80252 insignificant 1.0000e+00 1 insignificant 0.0470725 5.5180e-01 insignificant 1.0000000 insignificant 0.849672 0.8708609 -0.0257568 8 0.786049 0.810701 -0.02465220 9.8734e-01 0.21210245 insignificant 1.0000e+00 1.00000 insignificant 0.99870986 0.10141470 insignificant 1.000000 1.000000 insignificant -0.0572900 0.28817002 insignificant 1.000000 insignificant 0.867378 0.8342585 0.0328923 10 0.839964 0.8141260 0.0258379 6.3352e-02 0.91724 insignificant 7.3665e-01 1 insignificant 1.3755e-01 0.94842 insignificant 1.0000e+00 1 insignificant 0.1094378 0.16001194 insignificant 1.000000 insignificant 0.867378 0.8708609 -0.01286374 9 0.839964 0.810701 0.0292624 0.18205080 0.1377058 insignificant 1.000000 1.00000 insignificant 0.82200486 0.1234098 insignificant 1.00000 1 insignificant 0.00507538 0.9016206 insignificant 1.00000 insignificant 0.8342585 0.8708609 -5.1762e-02 9 0.8141260 0.8107015 0.0034245 0.86487 1.3014e-01 insignificant 1 1.0000e+00 insignificant 0.99493 4.5947e-02 weaklyHypometh 1 0.79218110 insignificant -0.1043625 0.1970808 insignificant 1.00000 insignificant chr12 116063613 116064613 42897 TESC ENSG00000088992 0.876991 416 9 0.8604975 445 9 0.761549 136 7 0.8213985 372 7 0.7568226 87 6 0.783776 391 9 0.823987 173 6 0.9094572 231 9 0.9012346 146 6 0.944444 87 6 0.925732 400 9 0.962963 49 6 0.9455967 128 7 0.923333 51 5 0.9274364 121 6 1.000000 48 6 1.000000 27 4 0.7878959 237 8 0.965119 278 9 0.900181 379 9 0.772865 86 7 0.952681 76 4 0.840705 176 6 0.9174383 93 6 0.831478 103 6 0.931640 459 9 0.665866 133 7 0.860382 83 6 0.9038337 215 9 0.912214 458 9 0.924560 522 9 0.874406 412 9 0.7480836 259 9 0.7773755 216 9 0.6486364 458 7 0.9687500 29 1 0.7178527 222 9 0.782995 457 9 0.8768667 366 7 0.903178 371 9 0.770718 367 7 0.8209066 172 7 0.815581 435 9 0.888398 0.8676309 0.7163499 0.9311084 0.8824035 0.894244 0.8954911 0.8818607 0.8731746 0.9800000 0.9068262 0.942185 0.9549808 0.909189 0.9563249 0.9839629 0.966844 0.880438 0.9507574 0.908382 0.8568182 0.9380028 0.881154 0.8581389 0.8076512 0.9407330 0.8897654 0.930343 0.893134 0.9239465 0.9544847 0.8930663 0.8943681 0.9338640 0.6549327 0.95156809 0.8695916 0.7885183 0.9041662 0.8942225 0.8894617 0.8419625 0.8939598 4 0.893810 0.903593 -0.01033268 9 0.841628 0.897765 -0.0561372 0.65916957 0.46542006 insignificant 1.000000 1.00000 insignificant 0.438088 0.90392384 insignificant 1 1.00000 insignificant 0.0232484 0.4309964 insignificant 1.00000 insignificant 0.893784 0.7605376 0.1058646 9 0.827230 0.8137838 0.0134465 1.6079e-05 0.995931 weaklyHypermeth 5.0622e-04 1 weaklyHypermeth 1.8357e-01 0.66315 insignificant 1.0000e+00 1 insignificant 0.1149720 4.6494e-02 weaklyHypermeth 1.0000000 insignificant 0.894448 0.8916227 0.0190997 7 0.918139 0.868720 0.04941970 3.0595e-02 0.81151673 weaklyHypermeth 1.0000e+00 1.00000 insignificant 0.01752589 0.97886414 weaklyHypermeth 1.000000 1.000000 insignificant 0.0514708 0.11148353 insignificant 1.000000 insignificant 0.903662 0.7592931 0.1183979 9 0.905629 0.7142273 0.1914018 2.9081e-04 0.99978 weaklyHypermeth 7.4567e-03 1 weaklyHypermeth 4.2926e-01 0.91975 insignificant 1.0000e+00 1 insignificant 0.0917236 0.10206562 insignificant 1.000000 insignificant 0.903203 0.8911644 0.02582679 7 0.842209 0.837993 0.0042163 0.02628096 0.8696769 weaklyHypermeth 1.000000 1.00000 insignificant 0.32787438 0.9207662 insignificant 1.00000 1 insignificant 0.02822238 0.4120126 insignificant 1.00000 insignificant 0.7603912 0.8915592 -8.1980e-02 7 0.7951622 0.8555916 -0.0604295 0.22428 1.5819e-01 insignificant 1 1.0000e+00 insignificant 0.21608 8.2664e-01 insignificant 1 1.00000000 insignificant -0.0635012 0.2396032 insignificant 1.00000 insignificant chr12 117261313 117262313 42910 ENSG00000221280 0.542908 392 11 0.6160114 338 13 0.356771 197 11 0.6489162 218 11 0.5204009 138 11 0.587162 175 11 0.364966 153 9 0.5117977 232 11 0.5691734 140 9 0.633383 96 9 0.584353 457 13 0.605556 77 7 0.5791028 157 11 0.651810 160 11 0.6335414 154 9 0.536364 64 9 0.321622 346 3 0.4959247 346 11 0.649459 157 11 0.489394 133 11 0.557776 78 6 0.657143 23 3 0.698051 246 11 0.4659722 113 11 0.280880 114 8 0.582220 342 13 0.571488 145 9 0.471717 46 4 0.5706714 209 11 0.629577 259 11 0.527751 260 13 0.498261 137 11 0.5372955 222 11 0.6405594 155 9 0.6203195 448 13 0.4865741 57 7 0.5375410 230 11 0.604855 234 11 0.5211982 315 11 0.680661 362 11 0.637455 245 11 0.6934588 304 7 0.660818 304 11 0.652370 0.5876304 0.4457357 0.6590988 0.5652725 0.579133 0.5025830 0.5233770 0.5574496 0.5194301 0.5398347 0.584583 0.5545773 0.667462 0.6212836 0.6240732 0.460839 0.605607 0.6740587 0.582328 0.6749352 0.6160937 0.677357 0.6062668 0.3460263 0.6505423 0.5772573 0.520377 0.623021 0.6086020 0.5186152 0.5772903 0.5476520 0.6669487 0.5898098 0.52106882 0.5478668 0.5900675 0.6653254 0.6523129 0.6935144 0.7062629 0.6338085 5 0.590017 0.596349 -0.00626617 11 0.572483 0.455152 0.1173305 0.44509231 0.32263249 insignificant 1.000000 1.00000 insignificant 0.651398 0.23392975 insignificant 1 1.00000 insignificant 0.0023052 0.9527254 insignificant 1.00000 insignificant 0.590279 0.6277860 -0.0015946 11 0.604369 0.6022633 0.0021058 8.3801e-01 0.356277 insignificant 1.0000e+00 1 insignificant 9.5409e-01 0.27568 insignificant 1.0000e+00 1 insignificant -0.0262599 4.3886e-01 insignificant 1.0000000 insignificant 0.590136 0.6470588 -0.0699650 11 0.566596 0.697788 -0.13119226 9.9862e-01 0.00119526 weaklyHypometh 1.0000e+00 0.14941 insignificant 0.99998202 0.00012797 weaklyHypometh 1.000000 0.063987 weaklyHypometh -0.0937872 0.03659319 weaklyHypometh 0.977199 insignificant 0.599388 0.6284438 0.0066281 11 0.552685 0.6214726 -0.0687880 7.1156e-01 0.79184 insignificant 1.0000e+00 1 insignificant 8.0150e-01 0.73695 insignificant 1.0000e+00 1 insignificant -0.0285651 0.48252293 insignificant 1.000000 insignificant 0.599388 0.6465969 -0.06418749 11 0.552685 0.654615 -0.1019306 0.94821688 0.0050404 weaklyHypometh 1.000000 0.50404 insignificant 0.98611248 0.0272153 weaklyHypometh 1.00000 1 insignificant -0.09609249 0.0497404 weaklyHypometh 1.00000 insignificant 0.6277860 0.6468280 -6.8307e-02 11 0.6022633 0.6776408 -0.0753775 0.99540 2.3892e-02 weaklyHypometh 1 3.9168e-01 insignificant 0.99973 9.6633e-03 weaklyHypometh 1 0.26842621 insignificant -0.0675273 0.1240669 insignificant 1.00000 insignificant chr12 117331113 117332113 42914 SUDS3 ENSG00000111707 0.851588 213 6 0.7408963 207 6 0.648035 118 6 0.8569650 162 6 0.8459374 94 6 0.806360 543 6 0.836944 118 6 0.7916622 132 6 0.8456070 123 6 0.823413 115 6 0.811754 235 6 0.705248 97 5 0.8152181 106 6 0.691558 32 4 0.8942308 101 6 0.765079 47 3 0.529514 87 3 0.8177609 145 6 0.846194 186 6 0.756796 499 6 0.900789 164 3 0.758271 123 6 0.903667 138 6 0.8212393 116 6 0.872487 83 6 0.790154 211 3 0.738718 139 5 0.721664 169 3 0.7600020 177 6 0.795943 226 4 0.712656 216 4 0.823852 359 6 0.7270785 164 6 0.7244098 92 6 0.7168554 190 6 0.5274242 44 3 0.6595238 255 6 0.829978 229 6 0.8001349 147 6 0.815130 199 6 0.824685 165 6 0.8477990 134 6 0.877078 188 6 0.854440 0.7249738 0.6722503 0.8617816 0.7817377 0.824668 0.7895410 0.8006949 0.8765266 0.8217152 0.8596390 0.747191 0.8479476 0.827966 0.9004274 0.7000823 0.683526 0.779568 0.8296717 0.797193 0.9088164 0.7495674 0.885174 0.8188859 0.8434215 0.8389500 0.7264498 0.862511 0.749691 0.8002477 0.7632621 0.8426390 0.7682096 0.6496269 0.8039672 0.56352670 0.6649753 0.7946598 0.7894298 0.8341469 0.7623991 0.8791234 0.8318727 3 0.796429 0.788779 0.00136429 6 0.815436 0.798303 0.0171323 0.41794812 0.33441138 insignificant 1.000000 1.00000 insignificant 0.397797 0.17330279 insignificant 1 1.00000 insignificant -0.0159152 0.5629954 lowCoverage 1.00000 lowCoverage 0.796429 0.7002053 0.0842090 6 0.815436 0.7515914 0.0638443 1.6199e-05 0.999748 weaklyHypermeth 5.0622e-04 1 weaklyHypermeth 1.1676e-03 0.99927 weaklyHypermeth 4.8652e-02 1 weaklyHypermeth 0.0864932 9.4587e-02 insignificant 1.0000000 insignificant 0.796247 0.8187275 -0.0207407 6 0.784675 0.836648 -0.05197285 8.0279e-01 0.00913159 weaklyHypometh 1.0000e+00 0.39703 insignificant 0.67767854 0.05515097 insignificant 1.000000 1.000000 insignificant -0.0489274 0.05124401 insignificant 1.000000 insignificant 0.788779 0.7002053 0.0828346 6 0.798303 0.7515914 0.0467120 5.9110e-04 0.99905 weaklyHypermeth 1.4778e-02 1 weaklyHypermeth 6.9777e-04 0.99959 weaklyHypermeth 3.6725e-02 1 weaklyHypermeth 0.1024084 0.05573820 lowCoverage 1.000000 lowCoverage 0.788752 0.8187275 -0.00743992 6 0.798021 0.836648 -0.0386272 0.38565289 0.0172389 weaklyHypometh 1.000000 0.90731 insignificant 0.18551199 0.2517537 insignificant 1.00000 1 insignificant -0.03301211 0.1786978 lowCoverage 1.00000 lowCoverage 0.6995885 0.8187275 -9.4930e-02 6 0.7101899 0.8366479 -0.1264579 0.99806 4.2555e-06 weaklyHypometh 1 2.8370e-04 weaklyHypometh 0.99060 1.9760e-03 weaklyHypometh 1 0.11055849 insignificant -0.1354206 0.0194718 weaklyHypometh 0.76763 insignificant chr12 118853913 118854913 42924 CIT ENSG00000122966 0.649288 104 7 0.4341153 144 6 0.510767 59 5 0.6479437 111 9 0.6306678 85 8 0.737606 92 5 0.599405 58 6 0.6338641 129 7 0.5665785 56 7 0.653221 77 6 0.655602 242 9 0.539815 39 3 0.7982244 124 9 0.575253 72 7 0.6145667 93 7 0.458333 30 2 0.800000 13 2 0.5652111 81 7 0.468421 82 6 0.709641 60 6 0.626984 59 7 0.602679 25 2 0.596006 92 8 0.7030303 74 9 0.676171 91 7 0.755888 146 6 0.790123 35 3 0.496296 31 3 0.6978902 107 7 0.666119 138 7 0.697321 135 9 0.754239 87 7 0.6614830 110 8 0.4229978 79 5 0.6417084 117 7 0.8888889 15 0 0.3450000 76 5 0.609240 92 7 0.7077673 93 9 0.814587 125 9 0.613116 132 9 0.6900527 62 3 0.662299 99 6 0.688702 0.5890435 0.5595632 0.6474078 0.5052327 0.659858 0.5967262 0.6434696 0.5497632 0.6804577 0.6558268 0.463911 0.7128714 0.611694 0.6433220 0.5026135 0.673047 0.750088 0.6371392 0.694525 0.7513441 0.6986460 0.632637 0.7905495 0.6286453 0.7292515 0.7656926 0.656989 0.632530 0.6694959 0.6619386 0.6381034 0.6883370 0.4463422 0.6002026 0.95967742 0.5342742 0.6642411 0.7678748 0.7627746 0.6035129 0.7456888 0.6611915 2 0.648772 0.699706 -0.03222185 5 0.636815 0.622659 0.0141553 0.89393237 0.11570674 insignificant 1.000000 1.00000 insignificant 0.951872 0.04202684 weaklyHypometh 1 1.00000 insignificant -0.0594693 0.0816539 insignificant 1.00000 insignificant 0.649254 0.6188525 0.0524022 5 0.644202 0.5768643 0.0673376 8.3879e-02 0.999212 insignificant 9.3002e-01 1 insignificant 4.8644e-01 0.87528 insignificant 1.0000e+00 1 insignificant 0.0175398 8.3757e-01 insignificant 1.0000000 insignificant 0.649254 0.7436399 -0.0539771 7 0.644202 0.698727 -0.05452512 9.9294e-01 0.06972872 insignificant 1.0000e+00 1.00000 insignificant 0.99697117 0.01821722 weaklyHypometh 1.000000 0.792053 insignificant -0.0851382 0.06728006 insignificant 1.000000 insignificant 0.700393 0.6188525 0.0848405 5 0.679265 0.5768643 0.1024005 3.0015e-03 0.99997 weaklyHypermeth 6.0031e-02 1 weaklyHypermeth 5.7384e-02 0.99918 insignificant 9.5640e-01 1 insignificant 0.0770091 0.38465602 insignificant 1.000000 insignificant 0.700393 0.7436399 -0.01957886 5 0.679265 0.698727 -0.0194622 0.82913143 0.3022215 insignificant 1.000000 1.00000 insignificant 0.82761216 0.4950181 insignificant 1.00000 1 insignificant -0.02566884 0.5467427 insignificant 1.00000 insignificant 0.6188525 0.7436399 -1.0525e-01 5 0.5768643 0.6987270 -0.1218627 0.99996 7.7040e-04 weaklyHypometh 1 2.4075e-02 weaklyHypometh 0.99980 3.2688e-02 weaklyHypometh 1 0.65630402 insignificant -0.1026780 0.2698676 insignificant 1.00000 insignificant chr12 119009013 119010013 42927 ENSG00000209219 0.115816 355 17 0.0078078 346 12 0.010955 455 12 0.0580808 277 13 0.0087912 227 12 0.171691 436 17 0.016582 434 12 0.0034722 281 12 0.0216135 357 12 0.010552 288 12 0.021699 642 12 0.037658 434 12 0.0079059 364 12 NA 0 0 0.0196544 543 12 0.022255 500 12 0.031697 359 12 0.0208333 293 8 0.008559 432 14 0.083333 359 14 0.022386 195 12 0.000000 31 3 0.058455 374 14 0.0064103 211 12 0.090909 25 1 0.062197 594 17 0.021569 225 12 0.030220 85 10 0.0076389 239 12 0.046637 671 17 0.083310 707 17 0.056913 463 15 0.0080357 287 12 0.0100253 301 12 0.0000000 497 16 0.0036765 227 8 0.0277778 81 8 0.059140 449 17 0.0000000 390 14 0.000000 480 14 0.019608 210 10 0.0668215 338 9 0.000000 169 9 0.017995 0.0025255 0.0042322 0.0000000 0.0028047 0.010553 0.0111056 0.0017434 0.0145583 0.0020241 0.0154429 0.014172 0.0069281 NA 0.0123346 0.0133640 0.018043 0.015390 0.0030440 0.010460 0.0063172 0.0068665 0.021618 0.0016093 0.0209403 0.0042035 0.0142752 0.017334 0.009449 0.0030035 0.0020397 0.0303820 0.0042140 0.0101813 0.0000000 0.00000000 0.0069735 0.0028344 0.0000000 0.0000000 0.0153417 0.0000000 0.0038354 5 0.014903 0.012320 0.00191346 14 0.201769 0.047593 0.1541759 0.59391628 0.99993464 insignificant 1.000000 1.00000 insignificant 0.476061 0.99999641 insignificant 1 1.00000 insignificant -0.0048192 0.7202234 insignificant 1.00000 insignificant 0.014503 0.0059718 0.0094754 14 0.068731 0.0233118 0.0454187 1.6510e-02 0.998460 weaklyHypermeth 2.4642e-01 1 insignificant 1.1504e-01 0.99983 insignificant 1.0000e+00 1 insignificant 0.0176254 2.0993e-01 insignificant 1.0000000 insignificant 0.014235 0.0081916 0.0055635 11 0.117745 0.067691 0.05005400 2.5138e-02 0.99999460 weaklyHypermeth 1.0000e+00 1.00000 insignificant 0.07137253 0.99999997 insignificant 1.000000 1.000000 insignificant 0.0184487 0.28783450 insignificant 1.000000 insignificant 0.012333 0.0059718 0.0075616 14 0.055525 0.0233118 0.0322136 5.5684e-01 1.00000 insignificant 1.0000e+00 1 insignificant 8.4440e-01 0.99999 insignificant 1.0000e+00 1 insignificant 0.0224446 0.09833305 insignificant 1.000000 insignificant 0.011292 0.0081916 0.00454426 11 0.010498 0.067691 -0.0571930 0.79423245 0.9999992 insignificant 1.000000 1.00000 insignificant 0.74683981 0.9999996 insignificant 1.00000 1 insignificant 0.02326786 0.1756416 insignificant 1.00000 insignificant 0.0054377 0.0019096 2.2915e-03 14 0.0050752 0.0021249 0.0029503 0.96249 1.0000e+00 insignificant 1 1.0000e+00 insignificant 0.98144 1.0000e+00 insignificant 1 1.00000000 insignificant 0.0008233 0.9598749 insignificant 1.00000 insignificant chr12 119402713 119403713 42938 DYNLL1 ENSG00000088986 0.798032 163 7 0.7976002 109 5 0.714585 46 5 0.7189626 131 7 0.8493772 79 5 0.886447 62 5 0.514064 97 7 0.8278388 69 5 0.6290816 73 7 0.665306 39 7 0.677403 125 7 0.817517 35 4 0.7693627 87 7 0.672467 74 5 0.6785714 40 3 0.860000 29 5 0.907967 29 2 0.8554075 166 6 0.597619 28 2 0.805442 40 7 0.777778 10 0 1.000000 10 0 0.771596 105 7 0.7857143 19 0 0.809091 68 3 0.811265 77 5 0.791667 14 0 0.300000 14 0 0.7287026 99 6 0.758242 48 5 0.683210 49 5 0.761905 48 5 0.6214387 106 6 0.5263158 74 5 0.7043651 55 5 0.8000000 15 3 0.6267007 40 5 0.619902 57 5 0.6460317 95 7 0.736905 119 7 0.698035 116 7 0.9184704 81 5 0.770806 125 7 0.807793 0.7552191 0.8196100 0.7743125 0.7926260 0.869989 0.5748757 0.8122066 0.7054829 0.7120054 0.7582586 0.907361 0.8131214 0.828339 0.8274648 0.8847356 0.807398 0.801505 0.7370892 0.807512 0.7781197 1.0000000 0.787497 0.7007042 0.7829706 0.8144575 0.9154930 0.486985 0.752606 0.6732866 0.8081215 0.8830203 0.5949199 0.5307635 0.6412363 0.78959010 0.5837525 0.6535452 0.8012520 0.7376761 0.7339966 0.8827714 0.7825340 0 0.751974 0.759358 -0.00307828 5 0.738200 0.743684 -0.0054841 0.51651327 0.55977478 insignificant 1.000000 1.00000 insignificant 0.678052 0.49179727 insignificant 1 1.00000 insignificant 0.0038885 0.9411989 lowCoverage 1.00000 lowCoverage 0.751974 0.6195965 0.1429968 5 0.738200 0.6418532 0.0963464 4.1758e-09 0.986046 weaklyHypermeth 1.9885e-07 1 weaklyHypermeth 1.0985e-04 0.98989 weaklyHypermeth 6.8654e-03 1 weaklyHypermeth 0.1023655 4.6801e-02 lowCoverage 1.0000000 lowCoverage 0.751974 0.7705224 -0.0138453 7 0.738200 0.757170 -0.01897023 7.3960e-01 0.38081558 insignificant 1.0000e+00 1.00000 insignificant 0.73684216 0.67408119 insignificant 1.000000 1.000000 insignificant -0.0018970 0.97192685 insignificant 1.000000 insignificant 0.759358 0.6195965 0.1431349 5 0.743684 0.6418532 0.1018305 1.8356e-05 0.99339 weaklyHypermeth 6.7984e-04 1 weaklyHypermeth 1.4494e-03 0.99923 weaklyHypermeth 5.7976e-02 1 weaklyHypermeth 0.0984769 0.11939539 lowCoverage 1.000000 lowCoverage 0.759358 0.7705224 -0.01157876 5 0.743684 0.757170 -0.0134862 0.78156451 0.6453987 insignificant 1.000000 1.00000 insignificant 0.58823543 0.8494340 insignificant 1.00000 1 insignificant -0.00578551 0.9308086 lowCoverage 1.00000 lowCoverage 0.6195965 0.7705224 -1.5687e-01 5 0.6418532 0.7571699 -0.1153166 0.99661 2.1162e-05 weaklyHypometh 1 1.0581e-03 weaklyHypometh 0.98609 9.0263e-03 weaklyHypometh 1 0.25789297 insignificant -0.1042625 0.1174110 lowCoverage 1.00000 lowCoverage chr12 120050713 120051713 42949 ENSG00000201945 0.633158 364 6 0.6772907 184 6 0.688778 150 6 0.5968897 168 6 0.7420635 37 3 0.695438 423 6 0.711275 76 3 0.6745536 123 6 0.8304972 101 6 0.757143 136 6 0.795122 187 6 0.799383 83 6 0.8451963 116 6 0.833333 6 1 0.8326577 97 6 0.744228 68 6 0.700575 74 6 0.8404618 210 6 0.836501 229 6 0.796454 369 6 0.638596 78 6 0.756190 61 4 0.736901 191 6 0.7515485 70 6 0.821837 102 6 0.744534 264 6 0.672619 96 4 0.583333 28 3 0.6782369 139 6 0.777715 271 6 0.661859 249 6 0.598206 454 6 0.5694357 147 6 0.7467262 99 6 0.6923913 173 6 0.8138740 69 6 0.5990693 119 6 0.663474 250 6 0.8767394 236 6 0.813931 270 6 0.800015 217 6 0.6739153 264 6 0.875198 210 6 0.783287 0.7151839 0.6955501 0.8484566 0.7694236 0.779623 0.7830317 0.8008676 0.8319600 0.7919414 0.8270050 0.813465 0.8752428 NA 0.8635737 0.7425732 0.740470 0.839870 0.8731795 0.805789 0.7288515 0.7704392 0.801785 0.7803620 0.8477945 0.7998675 0.7742915 0.700405 0.728561 0.8252499 0.8108237 0.7738488 0.6551349 0.7470648 0.7252357 0.82360519 0.7468746 0.7386450 0.8683216 0.8478234 0.8394293 0.8454588 0.8697706 6 0.776007 0.780330 0.01109205 6 0.628938 0.609669 0.0192686 0.13348274 0.87446708 insignificant 1.000000 1.00000 insignificant 0.128723 0.92853263 insignificant 1 1.00000 insignificant 0.0497518 0.0815661 insignificant 1.00000 insignificant 0.776110 0.7187865 0.0742000 6 0.624221 0.5164210 0.1078005 7.7938e-04 0.997458 weaklyHypermeth 1.6237e-02 1 weaklyHypermeth 5.0505e-02 0.99316 insignificant 9.5293e-01 1 insignificant 0.0707215 1.2637e-01 insignificant 1.0000000 insignificant 0.776007 0.8028404 -0.0535028 6 0.628938 0.846390 -0.21745215 9.9999e-01 0.00703110 weaklyHypometh 1.0000e+00 0.33215 insignificant 0.99969503 0.05736655 insignificant 1.000000 1.000000 insignificant -0.0564100 0.21646128 insignificant 1.000000 insignificant 0.780110 0.7187865 0.0613230 6 0.560878 0.5164210 0.0444566 2.9211e-02 0.99475 weaklyHypermeth 3.8948e-01 1 insignificant 2.8108e-01 0.91624 insignificant 1.0000e+00 1 insignificant 0.0209697 0.63771911 insignificant 1.000000 insignificant 0.780330 0.8028404 -0.06584354 6 0.609669 0.846390 -0.2367208 0.99999526 0.0017171 weaklyHypometh 1.000000 0.30206 insignificant 0.99999843 0.0184875 weaklyHypometh 1.00000 1 insignificant -0.10616175 0.0425658 weaklyHypometh 1.00000 insignificant 0.7187865 0.8021794 -1.2711e-01 6 0.5164210 0.8271885 -0.3107675 0.99999 7.2681e-04 weaklyHypometh 1 2.3446e-02 weaklyHypometh 0.99995 9.3831e-04 weaklyHypometh 1 0.06255410 weaklyHypometh -0.1271315 0.0386649 weaklyHypometh 1.00000 insignificant chr12 120458113 120459113 42963 RNF34 ENSG00000170633 0.195700 295 13 0.2065713 318 11 0.323166 379 11 0.2418534 320 17 0.1801269 253 11 0.300056 466 18 0.295907 300 11 0.2546137 427 12 0.2207915 536 11 0.283753 470 11 0.369966 310 11 0.303589 370 11 0.0913619 474 11 0.345467 380 11 0.2684394 739 11 0.255470 172 10 0.053391 143 7 0.1423923 334 11 0.118860 168 10 0.114245 371 14 0.519250 124 9 0.159284 364 12 0.348675 233 11 0.2514555 142 12 0.378432 219 12 0.217375 431 17 0.182928 386 12 0.373834 160 12 0.2290816 212 11 0.176158 572 17 0.076289 510 18 0.311331 290 14 0.1417912 308 11 0.0674603 137 11 0.1333333 284 9 0.0055740 331 13 0.0886974 294 12 0.083664 452 18 0.1558935 352 18 0.106133 264 17 0.115732 220 11 0.1899453 223 14 0.163934 371 17 0.196765 0.1419612 0.2266787 0.2051258 0.1465209 0.308750 0.2352646 0.1861267 0.1620842 0.2293616 0.3191538 0.213988 0.0631152 0.211467 0.1530475 0.2422684 0.042935 0.159134 0.0828283 0.080115 0.4270440 0.0852730 0.332741 0.1669046 0.2601170 0.2173454 0.1454839 0.263411 0.108668 0.0990755 0.0492064 0.2979866 0.0580314 0.0274170 0.0143907 0.00887850 0.0606522 0.0600442 0.1095293 0.0909901 0.0848391 0.1566485 0.1328475 10 0.214394 0.191092 0.02009225 11 0.188805 0.190531 -0.0017257 0.24047360 0.99094329 insignificant 1.000000 1.00000 insignificant 0.988921 0.29582144 insignificant 1 1.00000 insignificant -0.0403887 0.3308598 insignificant 1.00000 insignificant 0.214543 0.0454545 0.1507513 11 0.199294 0.0658706 0.1334236 8.4295e-22 1.000000 weaklyHypermeth 2.8098e-19 1 weaklyHypermeth 1.8834e-14 1.00000 weaklyHypermeth 1.8834e-11 1 weaklyHypermeth 0.1415326 1.4103e-04 weaklyHypermeth 0.0176287 weaklyHypermeth 0.214543 0.0888112 0.0694329 11 0.199294 0.146796 0.05249829 2.4338e-06 0.99990257 weaklyHypermeth 4.8676e-04 1.00000 weaklyHypermeth 0.00023630 0.99992034 weaklyHypermeth 0.078766 1.000000 weaklyHypermeth 0.0819585 0.00456167 weaklyHypermeth 0.240088 insignificant 0.190922 0.0459834 0.1284144 11 0.172987 0.1150353 0.0579515 8.8059e-08 1.00000 weaklyHypermeth 5.1800e-06 1 weaklyHypermeth 8.7964e-11 1.00000 weaklyHypermeth 8.7964e-08 1 weaklyHypermeth 0.1819213 0.00039187 weaklyHypermeth 0.043541 weaklyHypermeth 0.190974 0.0888112 0.05099064 11 0.182597 0.146796 0.0358013 0.03523384 0.9931709 weaklyHypermeth 1.000000 1.00000 insignificant 0.00655020 0.9999888 weaklyHypermeth 0.65502 1 insignificant 0.12234720 0.0065819 weaklyHypermeth 0.59836 insignificant 0.0454545 0.0888112 -5.2246e-02 17 0.0658706 0.1467959 -0.0809253 1.00000 1.0974e-05 weaklyHypometh 1 6.4552e-04 weaklyHypometh 1.00000 7.7299e-04 weaklyHypometh 1 0.05576667 weaklyHypometh -0.0595741 0.0446152 weaklyHypometh 1.00000 insignificant chr12 120846413 120847413 42977 WDR66 ENSG00000158023 0.676296 97 7 0.6723372 178 11 0.756244 104 7 0.6595888 136 10 0.5969192 119 10 0.779756 226 8 0.733824 167 7 0.7927276 151 8 0.6847664 92 7 0.799068 93 7 0.677511 224 7 0.652650 53 3 0.7676932 134 8 0.656205 56 4 0.7792680 137 11 0.169646 66 3 0.401018 337 3 0.5982069 125 7 0.771299 66 4 0.591545 135 8 0.768320 51 4 0.766117 54 4 0.792155 112 8 0.7406699 88 8 0.653387 95 8 0.726051 200 11 0.860694 90 6 0.610288 72 7 0.7303845 112 11 0.746048 169 9 0.793201 143 10 0.618122 210 8 0.6389342 202 11 0.6559733 100 4 0.6425595 157 10 0.7100000 26 3 0.5918747 125 8 0.763470 180 8 0.7990064 160 7 0.732847 207 11 0.741337 134 8 0.6726509 79 4 0.691197 173 11 0.808246 0.6410844 0.6449123 0.6557106 0.6351563 0.757072 0.6845144 0.6864811 0.5790223 0.6789606 0.6915521 0.697979 0.7486385 0.599614 0.7432234 0.4585584 0.594736 0.582586 0.7967573 0.711117 0.6797890 0.6838683 0.731529 0.7462014 0.6322831 0.6694248 0.8191139 0.578449 0.782836 0.7022827 0.7058178 0.6567846 0.6341139 0.5898590 0.6764456 0.75786565 0.6397519 0.7028011 0.7832615 0.7136199 0.6918714 0.6817227 0.6633147 3 0.683917 0.712751 -0.01684281 8 0.714778 0.723704 -0.0089257 0.55541802 0.09254488 insignificant 1.000000 1.00000 insignificant 0.751062 0.10889657 insignificant 1 1.00000 insignificant -0.0729580 0.0765684 insignificant 1.00000 insignificant 0.682999 0.6493671 0.0350513 8 0.686463 0.6278592 0.0586040 2.2268e-02 0.973268 weaklyHypermeth 3.1811e-01 1 insignificant 4.0029e-01 0.94763 insignificant 1.0000e+00 1 insignificant -0.0063067 8.8091e-01 insignificant 1.0000000 insignificant 0.683917 0.7277556 -0.0318659 5 0.714778 0.738551 -0.02377324 8.7519e-01 0.18182227 insignificant 1.0000e+00 1.00000 insignificant 0.90882241 0.16677215 insignificant 1.000000 1.000000 insignificant -0.0665791 0.11142393 insignificant 1.000000 insignificant 0.712751 0.6505718 0.0565067 8 0.723704 0.6546342 0.0690695 6.9837e-04 0.97677 weaklyHypermeth 1.6514e-02 1 weaklyHypermeth 3.2792e-02 0.98399 weaklyHypermeth 6.3497e-01 1 insignificant 0.0666513 0.06381113 insignificant 1.000000 insignificant 0.712751 0.7277556 -0.01932210 5 0.723704 0.738551 -0.0148475 0.50685384 0.0919406 insignificant 1.000000 1.00000 insignificant 0.57063217 0.3838376 insignificant 1.00000 1 insignificant 0.00637897 0.8390369 insignificant 1.00000 insignificant 0.6505718 0.7277556 -6.6935e-02 5 0.6546342 0.7385512 -0.0839170 0.94909 1.3740e-03 weaklyHypometh 1 3.8167e-02 weaklyHypometh 0.93132 1.5357e-01 insignificant 1 1.00000000 insignificant -0.0602723 0.1016275 insignificant 1.00000 insignificant chr12 121172623 121173623 42984 MLXIP ENSG00000175727 0.798605 245 10 0.7151902 315 11 0.598787 131 8 0.6617216 266 9 0.7817426 152 8 0.737009 299 11 0.672119 136 10 0.6923386 266 11 0.5437795 130 11 0.664172 140 7 0.786977 308 11 0.600000 89 5 0.7856061 191 11 0.550595 31 4 0.7661882 158 7 0.630952 83 4 0.703185 109 6 0.6830825 306 11 0.695282 347 11 0.691271 297 11 0.695591 74 7 0.781346 85 6 0.611275 160 8 0.7866546 101 8 0.899048 78 9 0.757044 359 11 0.782460 121 10 0.565473 91 7 0.7291078 156 10 0.845003 401 11 0.800236 323 11 0.751497 352 11 0.7255258 273 11 0.6984557 178 11 0.7484201 405 10 0.7275132 24 2 0.6037288 95 11 0.715742 406 11 0.7378098 247 13 0.823103 325 11 0.731897 244 11 0.7976500 174 8 0.800916 229 11 0.813102 0.6989824 0.6984751 0.8028237 0.8101094 0.786566 0.6935605 0.7051281 0.6407084 0.7049008 0.7935682 0.631712 0.7276848 0.662092 0.7272344 0.6482713 0.639631 0.770347 0.6728628 0.725945 0.7072549 0.8224068 0.671664 0.7782702 0.8617537 0.7546551 0.7770377 0.703093 0.761352 0.8125600 0.7842119 0.7910027 0.7359750 0.6585878 0.8484818 0.84594134 0.5998086 0.7215973 0.7510456 0.8282469 0.7716046 0.7708338 0.8375249 4 0.786556 0.816601 -0.04235309 11 0.706509 0.726880 -0.0203716 0.97861949 0.00032115 weaklyHypometh 1.000000 0.10705 insignificant 0.896306 0.00428273 weaklyHypometh 1 0.85655 insignificant -0.0624642 0.0624006 insignificant 1.00000 insignificant 0.787223 0.7892831 -0.0070047 11 0.727038 0.6791164 0.0479215 5.2117e-04 0.029158 weaklyHypometh 1.1581e-02 1 weaklyHypometh 8.4875e-02 0.10675 insignificant 1.0000e+00 1 insignificant -0.0153008 5.8133e-01 insignificant 1.0000000 insignificant 0.786556 0.8613618 -0.0488911 11 0.706509 0.774942 -0.06843316 9.2122e-01 0.00300026 weaklyHypometh 1.0000e+00 0.25992 insignificant 0.97033390 0.00783559 weaklyHypometh 1.000000 0.522373 insignificant -0.0903451 0.00352037 weaklyHypometh 0.220023 insignificant 0.818301 0.7892831 0.0295464 11 0.806360 0.6791164 0.1272439 8.9734e-05 0.90455 weaklyHypermeth 2.8042e-03 1 weaklyHypermeth 9.4778e-03 0.95646 weaklyHypermeth 2.7080e-01 1 insignificant 0.0471634 0.18403969 insignificant 1.000000 insignificant 0.816601 0.8613618 -0.00744683 11 0.726880 0.774942 -0.0480615 0.91535185 0.0414755 weaklyHypometh 1.000000 1.00000 insignificant 0.86424906 0.3577288 insignificant 1.00000 1 insignificant -0.02788082 0.4023181 insignificant 1.00000 insignificant 0.7892831 0.8666107 -4.7008e-02 11 0.6791164 0.7992453 -0.1201289 0.97218 5.7563e-03 weaklyHypometh 1 1.2227e-01 insignificant 0.98863 1.7105e-02 weaklyHypometh 1 0.42761385 insignificant -0.0750442 0.0245527 weaklyHypometh 0.79202 insignificant chr12 121938823 121939823 43001 HIP1R ENSG00000130787 0.527143 51 4 0.214614 97 6 0.178102 101 5 0.451613 31 1 0.246465 61 6 0.322279 57 3 0.240079 81 5 0.277525 83 6 0.459786 101 5 0.373567 57 5 0.361685 87 5 0.371044 60 6 0.170371 130 6 0.769231 13 1 0.165750 114 5 0.279461 50 5 0.190476 41 5 0.271825 74 4 0.416527 78 5 0.15490 83 5 0.46865 63 5 0.13636 25 1 0.333333 84 6 0.410714 60 4 0.555556 20 1 0.252425 120 5 0.355159 46 5 0.158333 29 3 0.178704 42 5 0.18020 106 6 0.293651 73 6 0.354497 64 6 0.578632 78 6 0.775163 51 5 1.0000000 28 1 0.0235294 21 1 0.828571 40 5 0.173576 62 5 0.538328 50 1 0.293162 61 5 0.81757 40 1 0.561111 36 1 0.464286 38 1 0.532236 0.358609 0.384957 NA 0.566930 0.449275 0.328416 0.626449 0.703696 0.574189 0.704925 0.579227 0.47767 NA 0.281815 0.922925 0.470497 0.449275 0.507763 0.207075 0.952739 0.388339 0.630435 0.477484 0.583661 0.311601 0.635093 0.460870 0.468961 0.319462 0.477433 0.593168 0.3595318 0.7519295 NA 0.1074169 0.621118 0.0113636 0.299311 0.349498 0.311986 0.400000 0.33696 1 0.316552 0.321038 -0.01244812 5 0.266244 0.273747 -0.00750265 0.492531 0.49045534 insignificant 1 1.00000 insignificant 0.460272 0.55628411 insignificant 1 1.00000 insignificant 0.0156570 0.7610671 lowCoverage 1 lowCoverage 0.316552 0.5857143 -0.276995 5 0.266244 0.4943973 -0.2281533 8.6847e-01 5.1510e-12 hypomethylated 1.0000e+00 5.1510e-09 hypomethylated 8.6901e-01 1.6249e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant -0.2411234 1.9109e-01 lowCoverage 1.0000e+00 lowCoverage 0.316552 0.355556 0.0494433 1 0.266244 0.490476 -0.2242323 2.5009e-01 1.3060e-07 lowCoverage 1.0000e+00 6.5299e-05 lowCoverage 9.8253e-02 1.1289e-04 lowCoverage 1.0000e+00 3.7629e-02 lowCoverage -0.2127688 6.3966e-02 lowCoverage 1.00000000 lowCoverage 0.321038 0.5857143 -0.2578278 5 0.273747 0.4943973 -0.2206507 8.7466e-01 2.2516e-07 hypomethylated 1.0000e+00 0.00022516 hypomethylated 9.1076e-01 0.03831448 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.2567804 1.6891e-01 lowCoverage 1.0000e+00 lowCoverage 0.321038 0.355556 0.06531715 1 0.273747 0.490476 -0.2167296 8.5869e-02 1.6953e-05 lowCoverage 1.0000e+00 8.4767e-03 lowCoverage 6.5890e-02 7.7708e-04 lowCoverage 1.0000e+00 3.8854e-01 lowCoverage -0.22842574 5.1591e-02 lowCoverage 1.000000 lowCoverage 0.5857143 0.355556 0.0785629 1 0.4943973 0.490476 0.0039211 0.0681534 9.7519e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.3959027 3.6597e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.0283547 8.7857e-01 lowCoverage 1.0000000 lowCoverage chr12 123419623 123420623 43043 FAM101A ENSG00000178882 0.822675 804 22 0.833104 526 22 0.774361 660 22 0.956966 529 16 0.839756 313 16 0.902227 837 22 0.807341 485 22 0.911388 490 22 0.892918 468 22 0.902726 528 22 0.869381 821 22 0.756633 358 14 0.907350 465 22 0.826126 280 12 0.876038 575 22 0.694399 296 18 0.793889 34 3 0.686004 882 22 0.849187 898 22 0.92276 789 22 0.83340 426 22 0.79324 343 20 0.904209 654 22 0.916389 363 16 0.885988 235 14 0.903903 668 22 0.843681 624 22 0.775012 292 20 0.931191 789 22 0.91385 569 22 0.948583 645 22 0.868265 920 22 0.015980 786 22 0.024671 805 22 0.0033459 732 19 0.2770779 204 13 0.058819 590 20 0.389382 947 22 0.668282 667 22 0.731987 665 22 0.75387 517 22 0.664613 873 22 0.601085 552 22 0.907407 0.872727 0.862708 0.958800 0.898681 0.956376 0.915364 0.935485 0.926523 0.940667 0.910924 0.887884 0.93626 0.888301 0.930968 0.818098 0.869042 0.735009 0.938359 0.907644 0.953723 0.736554 0.933613 0.935720 0.901296 0.902303 0.886872 0.892582 0.933084 0.905303 0.939774 0.947627 0.0173360 0.0193768 0.0255771 0.2615139 0.019305 0.4556421 0.820427 0.785336 0.829871 0.799358 0.70689 12 0.899891 0.906710 -0.00966638 22 0.756534 0.744851 0.01168326 0.996569 0.42079376 insignificant 1 1.00000 insignificant 0.998668 0.36830103 insignificant 1 1.00000 insignificant -0.0352144 0.1339075 insignificant 1 insignificant 0.900036 0.1186024 0.772948 22 0.759858 0.1420295 0.6178289 1.0916e-203 1.0000e+00 hypermethylated 1.0916e-200 1.0000e+00 hypermethylated 1.7385e-47 1.0000e+00 hypermethylated 1.7385e-44 1.00000000 hypermethylated 0.7130487 7.1715e-05 hypermethylated 3.4150e-03 hypermethylated 0.899447 0.769254 0.1202554 22 0.692863 0.612374 0.0804892 9.1899e-24 1.0000e+00 weaklyHypermeth 9.1899e-21 1.0000e+00 weaklyHypermeth 6.0594e-14 1.0000e+00 weaklyHypermeth 6.0594e-11 1.0000e+00 weaklyHypermeth 0.1572948 1.4534e-03 weaklyHypermeth 0.13212859 insignificant 0.907084 0.1186316 0.7803119 22 0.759180 0.1471020 0.6120783 8.1564e-161 1.0000e+00 hypermethylated 8.1564e-158 1.00000000 hypermethylated 7.5659e-43 1.00000000 hypermethylated 7.5659e-40 1.00000 hypermethylated 0.7482631 5.7996e-05 hypermethylated 3.0524e-03 hypermethylated 0.907501 0.770196 0.13344810 22 0.785966 0.656115 0.1298510 8.3267e-27 1.0000e+00 weaklyHypermeth 8.3267e-24 1.0000e+00 weaklyHypermeth 8.6001e-19 1.0000e+00 weaklyHypermeth 8.6001e-16 1.0000e+00 weaklyHypermeth 0.19250921 5.0166e-04 weaklyHypermeth 0.125416 insignificant 0.1181975 0.770597 -0.6590700 22 0.1155131 0.668070 -0.5525566 1.0000000 1.5594e-59 hypomethylated 1.00000 1.5594e-56 hypomethylated 1.0000000 1.3762e-24 hypomethylated 1 1.3762e-21 hypomethylated -0.5557539 1.6174e-04 hypomethylated 0.0095139 hypomethylated chr12 123421723 123422723 43044 FAM101A ENSG00000178882 0.808708 209 8 0.772211 96 5 0.860531 93 5 0.851860 165 4 0.416106 113 7 0.824108 193 6 0.379686 99 6 0.890173 151 11 0.729771 107 9 0.792840 124 8 0.798258 274 13 0.782540 53 6 0.820630 212 12 0.839426 77 6 0.758851 102 4 0.636905 42 4 1.000000 16 2 0.564896 466 13 0.772876 311 13 0.87610 182 8 0.63815 123 10 0.87623 117 6 0.446810 114 7 0.677759 108 8 0.735381 88 4 0.845339 107 9 0.655317 134 9 0.663139 36 3 0.686018 232 12 0.70652 114 9 0.876467 114 12 0.831960 146 8 0.740150 155 9 0.779897 475 13 0.5768116 122 5 0.8333333 92 2 0.479890 148 9 0.885978 192 13 0.660005 147 2 0.788327 161 8 0.77189 176 8 0.804795 285 2 0.653916 150 9 0.909393 0.934409 0.972210 0.945763 0.835756 0.954139 0.919721 0.940662 0.885771 0.952843 0.901749 0.942432 0.94775 0.878336 0.900807 0.948796 0.944693 0.899113 0.913123 0.945027 0.853533 0.891596 0.925567 0.967759 0.940739 0.857477 0.836236 0.836645 0.923773 0.952126 0.931530 0.985991 0.8821697 0.9489600 0.9873331 0.9756075 0.774858 0.9272975 0.898242 0.916907 0.916360 0.928525 0.95474 2 0.853809 0.847872 0.00592369 8 0.634719 0.619024 0.01569496 0.388231 0.86525292 insignificant 1 1.00000 insignificant 0.240728 0.73111001 insignificant 1 1.00000 insignificant 0.0388998 0.4386490 insignificant 1 insignificant 0.857283 0.8471284 0.015821 8 0.676081 0.6708290 0.0052515 1.7360e-03 3.2156e-02 weaklyHypermeth 2.0423e-02 1.0000e+00 weaklyHypermeth 6.8801e-02 8.3241e-01 insignificant 7.6098e-01 1.00000000 insignificant 0.0428140 5.7067e-01 insignificant 1.0000e+00 insignificant 0.861706 0.886834 0.0021514 4 0.724456 0.701060 0.0233953 4.1867e-01 4.4446e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.6999e-01 2.6290e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0230378 6.3322e-01 insignificant 1.00000000 insignificant 0.849930 0.8471284 0.0138104 9 0.649378 0.6708290 -0.0214515 1.5468e-01 5.3230e-01 insignificant 1.0000e+00 1.00000000 insignificant 1.4716e-01 0.96846458 insignificant 1.0000e+00 1.00000 insignificant 0.0039142 9.5865e-01 insignificant 1.0000e+00 insignificant 0.857857 0.886834 -0.00459932 5 0.684824 0.701060 -0.0162361 7.8509e-01 7.1126e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3463e-01 6.5450e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01586197 7.4861e-01 insignificant 1.000000 insignificant 0.8530928 0.887677 0.0095296 5 0.7721301 0.726193 0.0459373 0.8085016 5.5535e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9657959 5.5864e-01 insignificant 1 1.0000e+00 insignificant -0.0197762 7.9039e-01 insignificant 1.0000000 insignificant chr12 123454423 123455423 43048 FAM101A ENSG00000178882 0.838401 387 11 0.743168 358 15 0.860971 318 14 0.889253 374 12 0.835064 194 12 0.914965 538 13 0.783021 268 13 0.862471 294 14 0.829102 314 11 0.910244 213 12 0.851067 447 14 0.934982 134 9 0.826640 276 12 0.890399 92 5 0.733203 255 13 0.692874 134 12 0.883366 112 9 0.766752 470 10 0.785583 312 13 0.89745 387 13 0.85376 197 14 0.82653 159 10 0.890637 361 13 0.859105 183 13 0.863564 411 10 0.882553 464 15 0.832273 209 12 0.843959 176 10 0.811027 288 13 0.90991 434 15 0.918825 416 13 0.891733 580 14 0.404665 378 15 0.363973 270 13 0.5658337 438 13 0.5933044 222 11 0.391913 301 14 0.567475 437 15 0.834201 377 10 0.839426 522 13 0.89139 354 8 0.923153 529 8 0.687236 334 10 0.874319 0.849091 0.890505 0.907667 0.877441 0.892802 0.765996 0.829135 0.837378 0.874360 0.844284 0.924574 0.88100 0.892424 0.883772 0.745027 0.861451 0.842617 0.862221 0.905870 0.817790 0.817458 0.907453 0.915818 0.893484 0.901824 0.822589 0.866003 0.890558 0.885468 0.912354 0.860876 0.4880174 0.5348483 0.5913272 0.7817463 0.598409 0.7049861 0.793162 0.880013 0.915386 0.886938 0.76419 9 0.855732 0.872159 -0.01729546 14 0.826050 0.820622 0.00542741 0.924040 0.03247397 weaklyHypometh 1 1.00000 insignificant 0.965224 0.03887983 weaklyHypometh 1 1.00000 insignificant -0.0288751 0.1167478 insignificant 1 insignificant 0.855416 0.4757709 0.348616 14 0.801540 0.4560129 0.3455269 1.2682e-59 9.9960e-01 hypermethylated 2.5364e-57 1.0000e+00 hypermethylated 2.0484e-13 9.9913e-01 hypermethylated 2.2759e-11 1.00000000 hypermethylated 0.3552545 1.8083e-04 hypermethylated 7.5344e-03 hypermethylated 0.855828 0.856805 0.0312236 10 0.836011 0.833128 0.0028836 2.0407e-04 2.3566e-01 weaklyHypermeth 1.2899e-02 1.0000e+00 weaklyHypermeth 2.7259e-01 1.7351e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0013682 9.7591e-01 insignificant 1.00000000 insignificant 0.872676 0.4760039 0.3820613 14 0.879446 0.4560129 0.4234329 1.7584e-51 9.9858e-01 hypermethylated 2.9307e-49 1.00000000 hypermethylated 2.0704e-12 0.99970910 hypermethylated 2.3005e-10 1.00000 hypermethylated 0.3841297 1.8959e-04 hypermethylated 7.5836e-03 hypermethylated 0.872610 0.856805 0.05190170 10 0.871911 0.833128 0.0387836 6.1547e-06 4.6156e-01 weaklyHypermeth 5.5952e-04 1.0000e+00 weaklyHypermeth 1.3911e-01 6.4132e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03024331 5.0409e-01 insignificant 1.000000 insignificant 0.4762371 0.856805 -0.2668747 10 0.4845137 0.833128 -0.3486138 0.9999994 1.9806e-16 hypomethylated 1.00000 1.5235e-14 hypomethylated 0.9999895 8.6760e-07 hypomethylated 1 5.8221e-05 hypomethylated -0.3538864 2.0232e-04 hypomethylated 0.0112402 hypomethylated chr12 123461223 123462223 43049 FAM101A ENSG00000178882 0.789400 149 7 0.632660 181 7 0.787387 165 7 0.770602 245 7 0.706250 66 6 0.805229 256 7 0.630331 67 7 0.768948 255 7 0.624793 187 7 0.661407 210 7 0.784581 219 7 0.421556 65 4 0.570683 294 7 0.774822 204 7 0.655247 220 7 0.746151 117 7 0.458333 13 0 0.667478 258 7 0.749360 190 7 0.71692 130 7 0.73180 119 7 0.58503 132 7 0.869705 110 7 0.540931 62 5 0.733595 84 7 0.765143 285 7 0.798187 190 7 0.697070 80 4 0.918319 169 7 0.69560 294 7 0.628749 257 7 0.905612 248 7 0.030782 216 7 0.183806 171 7 0.0064935 259 6 0.0833333 34 1 0.088189 272 7 0.263280 378 7 0.599076 147 7 0.703867 154 7 0.57803 128 7 0.485774 115 7 0.538571 145 7 0.719294 0.631220 0.752113 0.722830 0.723750 0.779905 0.832341 0.723460 0.743926 0.829236 0.880788 0.413680 0.51891 0.698227 0.619701 0.650886 0.520256 0.616317 0.648815 0.686571 0.693805 0.511836 0.833964 0.591197 0.665534 0.734841 0.735835 0.656667 0.872654 0.646451 0.570683 0.859971 0.0232696 0.0292772 0.0408962 0.0839286 0.076589 0.0794465 0.626514 0.612269 0.484066 0.515949 0.52704 4 0.706101 0.721182 -0.01466876 7 0.663532 0.740258 -0.07672618 0.979738 0.15234593 insignificant 1 1.00000 insignificant 0.951945 0.08937984 insignificant 1 1.00000 insignificant -0.0530370 0.2245194 insignificant 1 insignificant 0.706101 0.0390977 0.671317 7 0.663532 0.1912315 0.4723004 7.0528e-68 9.8755e-01 hypermethylated 3.5264e-65 1.0000e+00 hypermethylated 3.8611e-18 9.9354e-01 hypermethylated 9.6527e-16 1.00000000 hypermethylated 0.5767930 5.2262e-07 hypermethylated 4.0202e-05 hypermethylated 0.706743 0.552975 0.1438464 7 0.704807 0.543171 0.1616353 1.2774e-05 9.9720e-01 weaklyHypermeth 1.2774e-03 1.0000e+00 weaklyHypermeth 4.8654e-04 9.9687e-01 weaklyHypermeth 5.4060e-02 1.0000e+00 weaklyHypermeth 0.1050435 4.2463e-02 weaklyHypermeth 1.00000000 insignificant 0.721182 0.0390977 0.6797098 7 0.740258 0.1912315 0.5490266 4.0481e-53 9.9993e-01 hypermethylated 8.0962e-51 1.00000000 hypermethylated 5.0948e-17 0.99998123 hypermethylated 1.6983e-14 1.00000 hypermethylated 0.6298301 3.7964e-08 hypermethylated 3.4513e-06 hypermethylated 0.720930 0.552975 0.15454409 7 0.735568 0.543171 0.1923967 6.0375e-06 9.9988e-01 weaklyHypermeth 5.5952e-04 1.0000e+00 weaklyHypermeth 1.7573e-04 9.9984e-01 weaklyHypermeth 2.5104e-02 1.0000e+00 weaklyHypermeth 0.15808054 9.0625e-03 weaklyHypermeth 0.682306 insignificant 0.0376506 0.552975 -0.5222424 7 0.0901354 0.543171 -0.4530360 0.9948559 5.1829e-27 hypomethylated 1.00000 1.0366e-24 hypomethylated 0.9978783 2.0132e-10 hypomethylated 1 4.6820e-08 hypomethylated -0.4717496 1.0464e-05 hypomethylated 0.0013080 hypomethylated chr12 123473023 123474023 43050 FAM101A ENSG00000178882 0.865821 358 8 0.783440 173 8 0.614231 151 8 0.864572 301 8 0.760591 138 6 0.917622 338 8 0.939035 113 6 0.581845 107 8 0.636918 100 7 0.884730 122 7 0.923342 158 8 0.708710 40 2 0.586219 126 8 0.682292 72 4 0.908775 148 8 0.500000 17 0 1.000000 13 1 0.457282 1073 8 0.530886 220 8 0.84421 301 8 0.85532 158 6 0.82194 170 8 0.938131 85 8 0.913492 51 6 0.824766 594 8 0.853601 221 8 0.821958 110 8 0.763749 62 5 0.908169 199 8 0.86621 231 8 0.666563 260 8 0.853033 261 8 0.011364 241 8 0.024038 307 8 0.0000000 534 8 0.0096154 200 8 0.062500 232 8 0.034854 462 8 0.840032 266 8 0.674907 300 8 0.87582 294 8 0.796311 520 8 0.390067 245 8 0.822116 0.770788 0.614974 0.863226 0.805485 0.939199 0.924832 0.578843 0.723215 0.845812 0.912739 0.606016 0.59638 0.753920 0.908082 0.647965 0.794192 0.465956 0.361553 0.807778 0.867844 0.804714 0.924886 0.901894 0.797064 0.841531 0.759987 0.731078 0.897758 0.844103 0.575517 0.901510 0.0033557 0.0070986 0.0000000 0.0028394 0.000000 0.0128829 0.772175 0.596780 0.866960 0.782402 0.32089 5 0.706128 0.810575 -0.10747240 8 0.742190 0.847210 -0.10502016 1.000000 0.00049463 weaklyHypometh 1 0.24731 insignificant 0.999840 0.04791840 weaklyHypometh 1 1.00000 insignificant -0.0910522 0.0416595 weaklyHypometh 1 insignificant 0.705998 0.0091093 0.699391 8 0.729603 0.0662964 0.6633065 1.3992e-52 1.0000e+00 hypermethylated 1.9988e-50 1.0000e+00 hypermethylated 3.2296e-18 1.0000e+00 hypermethylated 9.6527e-16 1.00000000 hypermethylated 0.7257975 9.9457e-15 hypermethylated 1.6576e-12 hypermethylated 0.705882 0.707077 0.0046546 8 0.642190 0.778405 -0.1362148 8.8875e-01 8.1552e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.6976e-01 9.8702e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0340979 7.3469e-01 insignificant 1.00000000 insignificant 0.810575 0.0086294 0.8047076 8 0.847210 0.0595557 0.7876547 6.0870e-76 1.0000e+00 hypermethylated 2.0290e-73 1.00000000 hypermethylated 2.1889e-18 1.00000000 hypermethylated 1.0944e-15 1.00000 hypermethylated 0.8168497 1.5614e-15 hypermethylated 1.5614e-12 hypermethylated 0.810417 0.706897 0.11401735 8 0.830234 0.753783 0.0764504 2.6078e-03 9.9926e-01 weaklyHypermeth 1.0252e-01 1.0000e+00 insignificant 3.4268e-03 9.9982e-01 weaklyHypermeth 2.1418e-01 1.0000e+00 insignificant 0.12515008 2.3223e-01 insignificant 1.000000 insignificant 0.0086338 0.706897 -0.7004854 8 0.0661730 0.753783 -0.6876103 1.0000000 2.1191e-33 hypomethylated 1.00000 7.0635e-31 hypomethylated 1.0000000 5.0516e-13 hypomethylated 1 2.5258e-10 hypomethylated -0.6916996 1.3284e-03 weaklyHypometh 0.0531359 weaklyHypometh chr12 123531223 123532223 43051 FAM101A ENSG00000178882 0.897937 180 6 0.754974 177 6 0.712449 137 6 0.941338 220 6 0.884070 72 6 0.914856 261 6 0.842288 97 8 0.930306 151 8 0.755501 96 6 0.794985 122 6 0.886647 244 8 0.634229 76 3 0.874698 139 6 0.896732 113 5 0.921664 149 6 0.661677 78 5 1.000000 2 0 0.811863 402 6 0.765690 288 8 0.93028 215 4 0.59298 139 7 0.95953 94 6 0.873314 73 6 0.774827 81 4 0.931551 258 6 0.831844 235 8 0.832889 179 6 0.830476 62 4 0.829326 274 6 0.87775 241 6 0.882072 183 7 0.895818 204 6 0.728034 140 6 0.952273 208 8 0.9547101 185 5 0.7593985 92 4 0.774204 110 8 0.838163 294 8 0.920241 122 4 0.970644 187 6 0.93031 166 4 0.922602 171 5 0.783199 128 4 0.886275 0.713761 0.742555 0.910377 0.846344 0.897394 0.735261 0.856273 0.784927 0.930682 0.893062 0.730079 0.81347 0.888235 0.860981 0.703393 0.947139 0.884617 0.689210 0.849395 0.807565 0.933110 0.845267 0.907319 0.905146 0.822656 0.821083 0.763432 0.786861 0.864545 0.848295 0.924240 0.8916139 0.9489537 0.9707012 0.8613560 0.891563 0.8578806 0.899839 0.941310 0.897164 0.895031 0.90925 3 0.846489 0.870792 -0.01873758 6 0.789882 0.802308 -0.01242596 0.878413 0.22417862 insignificant 1 1.00000 insignificant 0.916927 0.42962356 insignificant 1 1.00000 insignificant -0.0020885 0.9528565 insignificant 1 insignificant 0.846489 0.8802337 -0.034185 6 0.789882 0.7126071 0.0772753 9.4012e-01 5.4723e-03 weaklyHypometh 1.0000e+00 5.4723e-01 insignificant 9.9430e-01 1.5301e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant 0.0061456 8.9723e-01 insignificant 1.0000e+00 insignificant 0.846704 0.908269 -0.0628934 4 0.862353 0.920519 -0.0581658 9.9863e-01 4.4221e-03 lowCoverage 1.0000e+00 5.3637e-01 lowCoverage 9.9943e-01 3.5125e-03 lowCoverage 1.0000e+00 5.0179e-01 lowCoverage -0.0647905 1.3250e-01 lowCoverage 1.00000000 lowCoverage 0.870792 0.8802337 -0.0091376 8 0.802308 0.7126071 0.0897012 6.4306e-01 1.0452e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant 9.2549e-01 0.05338223 insignificant 1.0000e+00 1.00000 insignificant 0.0082341 8.6882e-01 insignificant 1.0000e+00 insignificant 0.871528 0.908269 -0.04211561 4 0.877885 0.920519 -0.0426334 9.8987e-01 1.5823e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.9709e-01 3.0115e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.06270203 1.6405e-01 lowCoverage 1.000000 lowCoverage 0.8819512 0.908269 -0.0272127 4 0.8907589 0.920519 -0.0297599 0.3015887 6.5106e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.4714886 7.4047e-01 lowCoverage 1 1.0000e+00 lowCoverage -0.0709361 2.0181e-01 lowCoverage 1.0000000 lowCoverage chr12 123593123 123594123 43058 NCOR2 ENSG00000196498 0.829862 220 12 0.610187 361 12 0.571534 262 12 0.812627 295 12 0.745392 209 10 0.763601 361 10 0.726490 176 9 0.602289 297 12 0.607284 266 11 0.741282 256 12 0.830426 298 12 0.755412 105 9 0.624646 279 11 0.649648 191 10 0.704632 228 10 0.538961 38 3 0.205882 38 2 0.554689 398 9 0.849247 459 9 0.81065 184 10 0.56738 103 5 0.31990 181 7 0.657874 201 12 0.582616 120 8 0.821659 140 9 0.809723 488 12 0.526521 131 7 0.690895 117 9 0.743790 387 12 0.77467 551 11 0.609571 532 12 0.880666 295 11 0.243638 356 12 0.369765 218 9 0.1567461 399 7 0.4033928 99 7 0.248547 309 14 0.491452 427 12 0.472998 250 9 0.552934 283 9 0.56805 180 9 0.520340 220 9 0.422100 218 9 0.753400 0.627949 0.603473 0.656290 0.558887 0.813865 0.808122 0.790920 0.714486 0.815776 0.831301 0.555359 0.56462 0.693799 0.699081 0.459643 0.566396 0.450176 0.811806 0.700505 0.593347 0.306274 0.759610 0.630768 0.652958 0.718717 0.633002 0.665394 0.775034 0.738273 0.579939 0.843165 0.1829175 0.2618412 0.1604257 0.3668379 0.282048 0.3986210 0.353969 0.353191 0.453885 0.374757 0.35881 4 0.735826 0.733951 0.01787769 12 0.662042 0.649656 0.01238540 0.558420 0.83786595 insignificant 1 1.00000 insignificant 0.775282 0.78703758 insignificant 1 1.00000 insignificant 0.0112983 0.8422886 insignificant 1 insignificant 0.735772 0.3276148 0.445743 12 0.643266 0.2604730 0.3827932 4.4086e-41 1.0000e+00 hypermethylated 3.6738e-39 1.0000e+00 hypermethylated 6.0114e-14 1.0000e+00 hypermethylated 7.5142e-12 1.00000000 hypermethylated 0.3578133 1.5825e-04 hypermethylated 6.8804e-03 hypermethylated 0.737100 0.344917 0.3199960 9 0.719914 0.520921 0.1989929 4.8151e-20 9.9975e-01 hypermethylated 1.6050e-17 1.0000e+00 hypermethylated 7.1950e-10 9.9093e-01 hypermethylated 2.3983e-07 1.0000e+00 hypermethylated 0.1694517 9.9149e-04 weaklyHypermeth 0.11684916 insignificant 0.734259 0.3274336 0.4254523 12 0.702288 0.2467639 0.4555239 3.2428e-22 1.0000e+00 hypermethylated 1.6214e-20 1.00000000 hypermethylated 6.2431e-08 1.00000000 hypermethylated 3.1216e-06 1.00000 hypermethylated 0.3465150 2.2058e-04 hypermethylated 8.4838e-03 hypermethylated 0.735011 0.344917 0.29606483 9 0.720266 0.520921 0.1993455 1.3331e-10 9.9990e-01 hypermethylated 3.3327e-08 1.0000e+00 hypermethylated 2.3117e-04 9.9796e-01 hypermethylated 2.5686e-02 1.0000e+00 hypermethylated 0.15815337 8.7269e-03 weaklyHypermeth 0.682306 insignificant 0.3294183 0.344917 -0.1169392 9 0.3195877 0.520921 -0.2013331 0.9893542 3.7301e-06 weaklyHypometh 1.00000 9.5644e-05 weaklyHypometh 0.9998441 2.0528e-02 weaklyHypometh 1 3.1104e-01 insignificant -0.1883616 1.2013e-02 weaklyHypometh 0.2502640 insignificant chr12 123602223 123603223 43060 NCOR2 ENSG00000196498 0.496478 309 7 0.401024 371 7 0.496435 336 6 0.500661 180 6 0.464033 187 7 0.638204 408 6 0.448584 320 7 0.369215 331 7 0.314227 362 7 0.468977 256 7 0.452432 323 7 0.347651 329 7 0.283039 367 7 0.434829 33 3 0.258866 340 7 0.280716 191 7 0.159366 379 5 0.223142 183 6 0.258754 273 6 0.44869 279 6 0.62000 103 6 0.18339 38 4 0.320831 249 6 0.377240 150 7 0.395614 56 3 0.442778 363 6 0.534836 153 7 0.428337 100 7 0.568929 357 6 0.37938 456 6 0.370476 455 7 0.672556 355 6 0.219917 435 6 0.155709 277 6 0.3169930 375 6 0.2723408 103 5 0.332280 184 8 0.226850 493 6 0.326314 404 6 0.398946 436 7 0.17304 206 6 0.162464 295 6 0.361983 188 7 0.365177 0.381915 0.413709 0.374887 0.428322 0.483053 0.462318 0.325255 0.332662 0.466327 0.493876 0.386046 0.17073 0.363537 0.235221 0.390152 0.202388 0.294429 0.211753 0.312888 0.521557 0.170909 0.391439 0.350359 0.377507 0.382266 0.452028 0.525058 0.456692 0.328026 0.286659 0.543185 0.1991225 0.1561469 0.2614206 0.1694034 0.297267 0.2068951 0.154417 0.116226 0.125047 0.132707 0.21418 6 0.335939 0.405644 -0.04476679 6 0.344673 0.408454 -0.06378100 0.998944 0.06261676 insignificant 1 1.00000 insignificant 0.999675 0.17244287 insignificant 1 1.00000 insignificant -0.0539310 0.2706578 insignificant 1 insignificant 0.336406 0.2056776 0.133897 6 0.413608 0.2380478 0.1755597 1.2412e-08 9.7634e-01 weaklyHypermeth 2.7583e-07 1.0000e+00 weaklyHypermeth 1.0493e-06 9.9656e-01 weaklyHypermeth 3.5437e-05 1.00000000 weaklyHypermeth 0.1332511 3.0055e-03 weaklyHypermeth 7.9091e-02 weaklyHypermeth 0.336289 0.115108 0.2013091 6 0.376007 0.323250 0.0527567 1.6259e-09 6.1844e-01 hypermethylated 2.7099e-07 1.0000e+00 hypermethylated 8.1953e-08 9.4062e-01 hypermethylated 2.0488e-05 1.0000e+00 hypermethylated 0.1027159 1.1099e-01 insignificant 1.00000000 insignificant 0.406726 0.2056776 0.1941573 6 0.470145 0.2380478 0.2320969 1.7301e-09 9.9975e-01 weaklyHypermeth 4.5528e-08 1.00000000 weaklyHypermeth 7.5882e-06 0.99975591 weaklyHypermeth 2.4599e-04 1.00000 weaklyHypermeth 0.1871822 1.2637e-03 weaklyHypermeth 4.3575e-02 weaklyHypermeth 0.406360 0.115108 0.24638700 6 0.445586 0.323250 0.1223360 6.7948e-12 9.8005e-01 hypermethylated 2.2649e-09 1.0000e+00 hypermethylated 1.0511e-06 9.8565e-01 hypermethylated 3.5035e-04 1.0000e+00 hypermethylated 0.15664697 3.3567e-02 weaklyHypermeth 1.000000 insignificant 0.2056776 0.115259 0.0548399 6 0.2380478 0.355575 -0.1175274 0.0180552 3.3344e-02 weaklyHypermeth 1.00000 3.8327e-01 insignificant 0.0337478 7.6239e-01 weaklyHypermeth 1 1.0000e+00 insignificant -0.0305352 6.0452e-01 insignificant 1.0000000 insignificant chr12 123705423 123706423 43072 NCOR2 ENSG00000196498 0.614874 299 8 0.464988 233 8 0.503845 206 8 0.727613 297 8 0.335038 102 8 0.604831 324 9 0.292483 133 8 0.416336 159 8 0.497196 160 8 0.515205 155 8 0.610881 293 10 0.595338 71 7 0.256935 213 8 0.493253 78 3 0.334785 203 8 0.540278 71 8 0.285189 118 5 0.297014 269 7 0.362339 208 8 0.41731 254 10 0.46947 146 8 0.25651 171 6 0.519640 186 8 0.442091 141 8 0.542081 63 4 0.362930 269 8 0.313617 117 8 0.436508 131 8 0.535740 174 8 0.39687 303 10 0.531229 303 9 0.654878 282 8 0.057292 262 8 0.041840 154 8 0.0869565 217 5 0.1428571 40 3 0.092036 197 6 0.473091 230 7 0.404963 319 9 0.490438 251 7 0.48248 234 8 0.474263 229 7 0.489622 293 8 0.478699 0.448246 0.420386 0.606788 0.302158 0.566359 0.380292 0.444897 0.410119 0.488453 0.515294 0.521881 0.25081 0.382783 0.344999 0.384672 0.451726 0.288797 0.369161 0.367354 0.494663 0.277810 0.520313 0.449725 0.428633 0.364728 0.324018 0.383625 0.432351 0.294438 0.371955 0.575898 0.0102576 0.0342126 0.0052608 0.1079137 0.039647 0.3082665 0.352183 0.378238 0.404046 0.384901 0.36267 6 0.446178 0.394576 0.02600767 8 0.495479 0.481954 0.01352485 0.440158 0.99595662 insignificant 1 1.00000 insignificant 0.506035 0.94206582 insignificant 1 1.00000 insignificant 0.0031560 0.9432880 insignificant 1 insignificant 0.446410 0.1081818 0.326191 8 0.578059 0.1632871 0.4147721 1.3009e-20 1.0000e+00 hypermethylated 5.2035e-19 1.0000e+00 hypermethylated 1.2172e-11 1.0000e+00 hypermethylated 7.6947e-10 1.00000000 hypermethylated 0.3092744 3.5967e-03 weaklyHypermeth 9.2223e-02 weaklyHypermeth 0.446122 0.350679 0.0521351 6 0.493671 0.419694 0.0739770 1.7575e-02 9.9650e-01 weaklyHypermeth 5.2149e-01 1.0000e+00 insignificant 3.1629e-02 9.9486e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant -0.0100662 7.7036e-01 insignificant 1.00000000 insignificant 0.394298 0.1081818 0.2895972 8 0.458114 0.1632871 0.2948264 4.1035e-13 1.0000e+00 hypermethylated 1.2823e-11 1.00000000 hypermethylated 1.7554e-09 0.99999999 hypermethylated 1.1702e-07 1.00000 hypermethylated 0.3061184 3.7549e-03 weaklyHypermeth 9.8814e-02 weaklyHypermeth 0.393219 0.350679 0.03095882 6 0.464022 0.419694 0.0443279 7.7085e-02 9.2429e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.5375e-01 9.0593e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01322221 7.1802e-01 insignificant 1.000000 insignificant 0.1083789 0.350679 -0.2848934 6 0.1959445 0.419694 -0.2237495 0.9994690 7.6770e-12 hypomethylated 1.00000 3.6557e-10 hypomethylated 0.9998679 4.4514e-07 hypomethylated 1 3.7095e-05 hypomethylated -0.3193406 4.1072e-03 weaklyHypometh 0.1140885 insignificant chr12 123764923 123765923 43078 NCOR2 ENSG00000196498 0.617297 241 3 0.560335 157 5 0.584315 113 5 0.889970 130 3 0.641667 44 4 0.741516 121 4 0.694236 69 5 0.657500 54 3 0.599038 50 3 0.684040 43 5 0.708548 137 5 0.693333 20 2 0.555000 34 3 0.645957 66 5 0.750000 21 3 0.722222 14 2 NA 0 0 0.836685 104 3 0.650000 16 0 0.81480 88 3 0.68000 35 4 0.62500 18 2 0.684795 151 3 0.781818 37 3 0.735556 139 4 0.876050 49 3 0.514286 26 3 0.666667 29 3 0.665556 120 5 0.64444 58 3 0.671531 57 3 0.658550 82 3 0.615140 153 5 0.518056 73 5 0.7888889 81 3 0.8750000 11 0 0.670614 122 5 0.732749 61 3 0.593933 224 3 0.658099 191 4 0.69811 213 3 0.667033 117 2 0.481664 172 3 0.777170 0.745532 0.675570 0.831968 0.724868 0.887822 0.853244 0.825000 0.703373 0.644797 0.880546 0.917460 0.73056 0.711894 0.690476 0.656085 NA 0.811028 0.956349 0.803885 0.752381 0.783647 0.762275 0.962482 0.889947 0.829398 0.676304 0.724868 0.814286 0.898589 0.881370 0.849035 0.8246410 0.7290564 0.8497354 1.0000000 0.772696 0.8703853 0.781131 0.796675 0.794715 0.725624 0.76772 2 0.748357 0.721598 -0.03085747 4 0.646859 0.680355 -0.03349544 0.885948 0.11574653 lowCoverage 1 1.00000 lowCoverage 0.849317 0.09067062 lowCoverage 1 1.00000 lowCoverage 0.0029680 0.9288357 lowCoverage 1 lowCoverage 0.748357 0.6766467 0.021549 4 0.646859 0.6021914 0.0446679 3.2031e-02 6.1644e-01 lowCoverage 3.1714e-01 1.0000e+00 lowCoverage 4.1143e-01 4.2609e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage -0.0134189 8.1772e-01 lowCoverage 1.0000e+00 lowCoverage 0.748357 0.778626 0.0106302 3 0.646859 0.638508 0.0083512 3.2851e-02 4.3072e-02 lowCoverage 8.8787e-01 1.0000e+00 lowCoverage 6.5359e-02 2.2472e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0668877 1.7329e-01 lowCoverage 1.00000000 lowCoverage 0.721598 0.6766467 0.0537582 5 0.680355 0.6021914 0.0781633 1.3387e-02 8.4882e-01 weaklyHypermeth 1.4711e-01 1.00000000 insignificant 3.0701e-01 0.82784528 insignificant 1.0000e+00 1.00000 insignificant -0.0163869 7.8420e-01 lowCoverage 1.0000e+00 lowCoverage 0.721598 0.778626 0.04388749 3 0.680355 0.638508 0.0418466 1.4200e-03 8.2482e-02 lowCoverage 6.1737e-02 1.0000e+00 lowCoverage 3.8433e-02 5.1662e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.06391963 2.0384e-01 lowCoverage 1.000000 lowCoverage 0.6766467 0.778626 -0.0155206 3 0.6021914 0.638508 -0.0363167 0.0626624 8.0427e-02 lowCoverage 1.00000 7.8850e-01 lowCoverage 0.0181377 2.6309e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.0803066 2.4612e-01 lowCoverage 1.0000000 lowCoverage chr12 123779123 123780123 43081 NCOR2 ENSG00000196498 0.834804 86 5 0.660299 90 5 0.706410 35 2 0.841645 131 5 0.702143 32 5 0.624680 183 5 0.513889 31 2 0.682804 59 5 0.713939 38 3 0.875926 38 4 0.717000 118 5 0.700000 10 0 0.719048 55 5 0.728571 33 5 0.808462 64 5 0.600000 15 0 0.600000 14 0 0.778107 113 5 0.816782 77 5 0.61563 144 5 0.85000 20 0 0.73333 33 2 0.748371 58 5 0.770635 46 5 0.764286 59 5 0.627561 124 5 0.707576 34 2 0.744444 14 1 0.825238 70 5 0.71173 103 5 0.653889 82 5 0.611823 174 5 0.530072 76 5 0.689286 45 5 0.6524224 74 5 0.6000000 8 0 0.625238 71 5 0.677690 102 5 0.824782 75 5 0.814733 95 5 0.75653 121 5 0.716944 58 5 0.822273 92 5 0.836930 0.660528 0.708625 0.843464 0.706169 0.750625 0.623737 0.820882 0.714679 0.854978 0.718961 0.701299 0.86271 0.730056 0.811489 0.601732 0.603896 0.780346 0.818077 0.740186 0.853896 0.734848 0.745630 0.726160 0.767625 0.627790 0.849115 0.893506 0.828386 0.711853 0.655664 0.735784 0.6384828 0.6904917 0.6538437 0.6038961 0.627829 0.6796790 0.825882 0.816105 0.757639 0.718813 0.82217 0 0.754758 0.724602 0.03209698 5 0.656629 0.648126 0.00850334 0.150404 0.79521790 insignificant 1 1.00000 insignificant 0.422457 0.34400762 insignificant 1 1.00000 insignificant -0.0170672 0.5703477 lowCoverage 1 lowCoverage 0.754758 0.6436170 0.109491 5 0.656629 0.5521368 0.1044922 4.4254e-06 9.8814e-01 weaklyHypermeth 7.1377e-05 1.0000e+00 weaklyHypermeth 3.0302e-03 9.8802e-01 weaklyHypermeth 4.8098e-02 1.00000000 weaklyHypermeth 0.0828891 2.1421e-02 lowCoverage 4.1195e-01 lowCoverage 0.757910 0.782313 -0.0198643 5 0.759383 0.782648 -0.0232645 8.4524e-01 4.1930e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.1278e-01 4.8339e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0750455 2.7264e-02 lowCoverage 0.97828104 lowCoverage 0.724602 0.6436170 0.0769628 5 0.648126 0.5521368 0.0959889 1.7448e-03 9.2438e-01 weaklyHypermeth 2.2958e-02 1.00000000 weaklyHypermeth 9.1914e-03 0.99944140 weaklyHypermeth 1.3926e-01 1.00000 insignificant 0.0999563 8.2663e-03 lowCoverage 1.8787e-01 lowCoverage 0.726937 0.782313 -0.05294366 5 0.727751 0.782648 -0.0548971 9.7819e-01 1.1269e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.6169e-01 3.5564e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.05797829 7.8835e-02 lowCoverage 1.000000 lowCoverage 0.6453333 0.782313 -0.1302836 5 0.6625641 0.782648 -0.1200838 0.9980198 3.3683e-05 weaklyHypometh 1.00000 7.3224e-04 weaklyHypometh 0.9998934 6.1202e-04 weaklyHypometh 1 1.7486e-02 weaklyHypometh -0.1579346 8.4266e-04 lowCoverage 0.0383029 lowCoverage chr12 123857623 123858623 43088 NCOR2 ENSG00000196498 0.901879 195 5 0.919231 79 5 0.916858 94 5 0.928135 191 5 0.929581 74 5 0.799641 156 5 0.808333 89 5 0.896215 47 5 0.887692 62 5 0.938961 58 5 0.899747 179 5 0.930000 62 5 0.882302 60 5 NA 0 0 0.937124 72 5 0.859740 94 5 0.927778 106 5 0.968753 242 5 0.965556 82 5 0.83746 105 3 0.65000 40 3 0.76397 51 3 0.941827 147 5 0.911111 21 3 0.916667 36 3 0.939310 133 5 0.773214 52 3 1.000000 27 3 0.941839 91 5 0.91907 168 5 0.916275 132 5 0.903255 193 5 1.000000 36 3 0.854762 82 5 0.2500000 48 3 0.5618182 66 3 0.914286 34 5 0.643118 79 5 0.971284 175 5 0.827623 265 5 0.91268 181 5 0.899683 198 5 0.905894 190 5 0.877087 0.949354 0.911307 0.942003 0.912332 0.903745 0.901081 0.870052 0.908103 0.957123 0.899402 0.952290 0.88812 NA 0.955446 0.894121 0.960206 0.979261 0.978159 0.878641 0.933206 0.900230 0.950388 0.897869 0.894688 0.938036 0.925504 0.985881 0.956185 0.925809 0.877152 0.943203 1.0000000 0.8082818 0.4090992 0.8719639 0.949836 0.7621491 0.975745 0.839759 0.866159 0.931601 0.91807 3 0.915486 0.933089 -0.01784602 5 0.912954 0.931341 -0.01838653 0.967598 0.11640599 insignificant 1 1.00000 insignificant 0.620177 0.07201673 insignificant 1 1.00000 insignificant 0.0204629 0.5160278 lowCoverage 1 lowCoverage 0.915486 0.7710145 0.149617 5 0.912954 0.7609717 0.1519824 1.8772e-04 8.2225e-01 weaklyHypermeth 2.5029e-03 1.0000e+00 weaklyHypermeth 8.0492e-02 4.4809e-01 insignificant 8.5630e-01 1.00000000 insignificant 0.1978439 1.4140e-01 lowCoverage 1.0000e+00 lowCoverage 0.915486 0.894945 0.0207831 5 0.912954 0.894494 0.0184603 2.0891e-01 8.3814e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.9023e-01 7.6417e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0015909 9.5195e-01 lowCoverage 1.00000000 lowCoverage 0.933089 0.7710145 0.1661685 5 0.931341 0.7609717 0.1703689 2.9701e-03 9.7130e-01 weaklyHypermeth 3.7126e-02 1.00000000 weaklyHypermeth 4.0803e-02 0.80311750 weaklyHypermeth 4.8575e-01 1.00000 insignificant 0.1773810 1.8267e-01 lowCoverage 1.0000e+00 lowCoverage 0.933089 0.894945 0.03838839 5 0.931341 0.894494 0.0368468 1.0813e-02 9.8501e-01 weaklyHypermeth 3.4880e-01 1.0000e+00 insignificant 6.1315e-02 5.5966e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02205379 5.5778e-01 lowCoverage 1.000000 lowCoverage 0.7710145 0.894945 -0.1277840 5 0.7609717 0.894494 -0.1335221 0.5215977 1.3005e-01 insignificant 1.00000 1.0000e+00 insignificant 0.5476609 2.1418e-01 insignificant 1 1.0000e+00 insignificant -0.1994348 1.4043e-01 lowCoverage 1.0000000 lowCoverage chr12 123906723 123907723 43094 SCARB1 ENSG00000073060 0.885958 304 8 0.881171 231 7 0.841958 236 8 0.842968 305 8 0.833437 131 5 0.874903 386 10 0.754893 237 9 0.848251 174 8 0.761796 250 6 0.688030 178 8 0.791969 284 8 0.798365 174 6 0.814636 216 8 0.683259 84 4 0.890327 229 8 0.754610 138 8 0.814205 393 6 0.724330 411 4 0.740028 286 7 0.75030 311 7 0.75917 152 8 0.85221 125 8 0.626379 231 8 0.861877 120 8 0.725428 196 7 0.811761 244 8 0.650154 200 10 0.684491 161 9 0.807929 234 5 0.92777 244 5 0.796483 244 5 0.925178 324 8 0.813010 171 8 0.602903 199 7 0.8820804 240 4 0.6433333 39 4 0.635370 178 6 0.836194 273 10 0.797131 290 8 0.725247 324 8 0.88163 279 5 0.751652 388 5 0.771191 350 8 0.849411 0.758138 0.788305 0.854540 0.873427 0.864297 0.809314 0.873739 0.814164 0.792417 0.847514 0.822388 0.88920 0.790771 0.844316 0.832607 0.928169 0.858087 0.910670 0.906306 0.783985 0.828574 0.853650 0.955713 0.887415 0.861537 0.700911 0.897203 0.838568 0.892324 0.906991 0.871301 0.7048873 0.5217758 0.6886467 0.5746201 0.892576 0.7578860 0.888302 0.879177 0.845186 0.914476 0.82830 5 0.848729 0.855178 -0.00518787 8 0.781962 0.776826 0.00513605 0.348212 0.78550615 insignificant 1 1.00000 insignificant 0.594859 0.67697605 insignificant 1 1.00000 insignificant 0.0130340 0.6907950 insignificant 1 insignificant 0.848699 0.7415833 0.122020 8 0.767426 0.6629945 0.1044316 4.8120e-07 4.8153e-01 weaklyHypermeth 8.5929e-06 1.0000e+00 weaklyHypermeth 2.6254e-02 5.6345e-01 weaklyHypermeth 3.3233e-01 1.00000000 insignificant 0.0632880 2.6714e-01 insignificant 1.0000e+00 insignificant 0.848901 0.863887 -0.0082028 8 0.834093 0.750102 0.0839905 1.8670e-02 8.6737e-01 inconclusive 5.3342e-01 1.0000e+00 insignificant 2.9763e-01 8.7291e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0133993 6.7377e-01 insignificant 1.00000000 insignificant 0.855237 0.7409091 0.1278899 8 0.776826 0.6215574 0.1552686 3.3397e-03 4.2820e-01 weaklyHypermeth 4.0728e-02 1.00000000 weaklyHypermeth 4.6946e-02 0.48262576 weaklyHypermeth 5.4589e-01 1.00000 insignificant 0.0502540 4.0484e-01 insignificant 1.0000e+00 insignificant 0.855637 0.863887 -0.00094435 8 0.784170 0.750102 0.0340676 6.1850e-01 9.5022e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.5148e-01 9.8710e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00036523 9.9274e-01 insignificant 1.000000 insignificant 0.7422587 0.863804 -0.1321258 8 0.7103513 0.732253 -0.0219012 0.0980555 6.4805e-02 insignificant 1.00000 6.4805e-01 insignificant 0.3082985 3.0806e-01 insignificant 1 1.0000e+00 insignificant -0.0498887 4.0334e-01 insignificant 1.0000000 insignificant chr12 129192723 129193723 43147 ENSG00000214039 0.893419 415 5 0.840450 285 5 0.734203 116 5 0.884098 329 6 0.976068 58 5 0.949970 372 5 0.885444 85 5 0.872297 141 5 0.834878 90 5 0.876471 62 4 0.900962 296 5 0.696970 21 1 0.711966 78 5 0.836620 63 5 0.675666 92 5 0.752646 32 4 1.000000 1 0 0.487801 781 5 0.909915 322 4 0.88996 293 5 0.67965 111 4 0.82646 40 4 0.613621 151 5 0.948864 55 5 0.919240 156 5 0.899568 291 6 0.773632 106 5 0.638889 60 5 0.887369 243 4 0.86707 329 6 0.917421 312 5 0.897144 274 5 0.639017 208 5 0.580118 185 5 0.4979830 494 6 0.5611111 53 3 0.368857 227 6 0.733394 352 6 0.940897 343 5 0.919718 295 6 0.83869 345 5 0.854117 463 4 0.676257 287 6 0.878847 0.767283 0.766238 0.856000 0.956158 0.895651 0.768803 0.831218 0.884139 0.893489 0.882353 0.698699 0.83086 0.860417 0.834320 0.804110 NA 0.652453 0.894673 0.890457 0.943948 0.808973 0.880843 0.905018 0.904472 0.907448 0.756201 0.887604 0.916433 0.910497 0.862332 0.872362 0.6961587 0.6610520 0.3968383 0.6647399 0.552407 0.5353009 0.919353 0.900074 0.830566 0.832386 0.87110 3 0.819384 0.884126 -0.06546496 5 0.778964 0.767872 0.01109227 0.959413 0.00790255 weaklyHypometh 1 0.83417 insignificant 0.814009 0.18284741 insignificant 1 1.00000 insignificant 0.0080795 0.8542741 lowCoverage 1 lowCoverage 0.819384 0.5675676 0.247198 5 0.778964 0.6018269 0.1771375 2.0003e-14 9.9436e-01 hypermethylated 6.0616e-13 1.0000e+00 hypermethylated 2.1179e-08 9.9999e-01 hypermethylated 1.0085e-06 1.00000000 hypermethylated 0.2670768 1.5930e-03 lowCoverage 4.9781e-02 lowCoverage 0.819384 0.870744 -0.0547804 5 0.778964 0.730570 0.0483944 9.2224e-01 1.3453e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.4723e-01 4.6934e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0154450 7.8287e-01 lowCoverage 1.00000000 lowCoverage 0.883710 0.5668203 0.3193953 5 0.682553 0.5349572 0.1475958 2.6901e-17 9.9654e-01 hypermethylated 9.2762e-16 1.00000000 hypermethylated 3.1772e-08 0.99995693 hypermethylated 1.7621e-06 1.00000 hypermethylated 0.2589973 1.8555e-03 lowCoverage 5.7984e-02 lowCoverage 0.884126 0.870744 0.01425135 5 0.767872 0.730570 0.0373021 3.9472e-01 7.6048e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.9804e-01 8.7199e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02352449 6.9322e-01 lowCoverage 1.000000 lowCoverage 0.5675676 0.870744 -0.2816517 6 0.6018269 0.730570 -0.1287431 0.9942199 1.1418e-08 hypomethylated 1.00000 3.9374e-07 hypomethylated 0.9999516 1.1168e-05 hypomethylated 1 5.8781e-04 hypomethylated -0.2825218 2.6599e-03 weaklyHypometh 0.0858038 weaklyHypometh chr12 129254323 129255323 43148 FZD10 ENSG00000111432 0.893049 548 9 0.797363 212 9 0.812025 216 10 0.851190 416 9 0.901438 173 9 0.763912 586 9 0.847239 272 9 0.886884 220 9 0.819471 248 9 0.930538 144 8 0.792119 311 10 0.717514 127 8 0.840297 202 9 0.843323 135 9 0.734906 208 8 0.851141 91 8 0.841071 53 6 0.692854 634 9 0.843257 331 9 0.79362 515 9 0.71711 127 7 0.62717 108 6 0.821988 236 9 0.680556 140 8 0.865909 83 8 0.878603 280 10 0.825600 179 9 0.817738 139 8 0.915602 272 9 0.90666 355 10 0.703687 259 9 0.713659 426 9 0.579138 297 9 0.610590 233 9 0.9189560 138 6 0.3571429 22 0 0.657928 281 9 0.742336 304 9 0.885310 590 9 0.833873 470 9 0.89125 356 9 0.826507 573 9 0.821302 524 9 0.878953 0.810139 0.829938 0.895214 0.905321 0.870618 0.877953 0.874389 0.869581 0.917955 0.869468 0.869199 0.92400 0.893931 0.874782 0.897054 0.881493 0.820009 0.940539 0.881341 0.794939 0.746645 0.908951 0.807353 0.869921 0.912817 0.935718 0.940124 0.913239 0.888285 0.708705 0.804280 0.6528533 0.5800693 0.8611447 0.4319178 0.628126 0.7223008 0.896221 0.850516 0.874422 0.870827 0.81693 8 0.886388 0.860492 0.02462160 9 0.816694 0.793888 0.02280599 0.018963 0.99062069 weaklyHypermeth 1 1.00000 insignificant 0.406844 0.95543841 insignificant 1 1.00000 insignificant 0.0331370 0.3030807 insignificant 1 insignificant 0.886388 0.7032967 0.187619 9 0.816694 0.6904725 0.1262218 9.9706e-24 9.8806e-01 weaklyHypermeth 4.5321e-22 1.0000e+00 weaklyHypermeth 3.0186e-07 9.8806e-01 weaklyHypermeth 1.1180e-05 1.00000000 weaklyHypermeth 0.1783120 6.5665e-02 insignificant 9.6567e-01 insignificant 0.886464 0.843613 0.0122810 9 0.818212 0.866344 -0.0481323 3.5243e-01 5.8547e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.5123e-01 6.1656e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0289886 1.8259e-01 insignificant 1.00000000 insignificant 0.860599 0.7035294 0.1625083 9 0.809743 0.7142823 0.0954608 2.1751e-08 9.8871e-01 weaklyHypermeth 5.0584e-07 1.00000000 weaklyHypermeth 1.4060e-04 0.99060857 weaklyHypermeth 3.6052e-03 1.00000 weaklyHypermeth 0.1451750 1.1998e-01 insignificant 1.0000e+00 insignificant 0.860608 0.843613 -0.01430819 9 0.793333 0.866344 -0.0730116 9.2291e-01 1.5809e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.0652e-01 4.4227e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.06212556 6.9647e-02 insignificant 1.000000 insignificant 0.7030636 0.843613 -0.1766787 9 0.6623337 0.866344 -0.2040106 0.9476135 5.9067e-07 weaklyHypometh 1.00000 1.6408e-05 weaklyHypometh 0.9788860 1.3571e-03 weaklyHypometh 1 3.3927e-02 weaklyHypometh -0.2073005 4.0761e-02 weaklyHypometh 0.6368833 insignificant chr12 129876223 129877223 43150 ENSG00000208928 0.285913 143 7 0.317064 364 7 0.268657 303 10 0.458190 102 4 0.356620 218 10 0.379201 280 10 0.398584 348 10 0.294309 248 7 0.328192 211 10 0.393271 201 10 0.354571 436 10 0.512366 216 10 0.511674 249 10 0.614719 75 3 0.413352 258 7 0.340940 292 6 0.338643 148 5 0.546030 139 4 0.264878 331 7 0.49318 207 10 0.37460 108 7 0.60720 63 4 0.160486 133 7 0.313656 120 7 0.484524 28 3 0.368971 397 10 0.280294 191 9 0.363652 78 6 0.478884 289 8 0.44993 366 10 0.415668 361 10 0.396685 331 10 0.411103 211 10 0.260950 256 7 0.2246146 98 9 0.3214286 22 1 0.434804 113 7 0.337601 383 10 0.679229 139 6 0.623690 188 7 0.67099 81 6 0.774742 89 6 0.596784 95 4 0.297897 0.300578 0.288757 0.399357 0.434903 0.387232 0.396448 0.393051 0.378893 0.421637 0.454088 0.467233 0.56819 0.513712 0.440591 0.276216 0.442510 0.482964 0.433228 0.566320 0.468918 0.523122 0.242950 0.358542 0.386365 0.349539 0.305196 0.395929 0.444123 0.455562 0.454805 0.446118 0.3808217 0.4017994 0.4437081 0.3000438 0.439149 0.4463708 0.656478 0.635121 0.701772 0.661579 0.64353 4 0.371776 0.419473 -0.01008253 10 0.404604 0.388280 0.01632463 0.899161 0.49941058 insignificant 1 1.00000 insignificant 0.747433 0.77747009 insignificant 1 1.00000 insignificant 0.0023046 0.9539510 insignificant 1 insignificant 0.371615 0.3998153 -0.012834 8 0.387259 0.4037040 -0.0164445 4.9351e-06 5.5211e-04 weaklyHypometh 7.8336e-05 7.8873e-02 weaklyHypometh 4.6525e-04 8.5479e-02 inconclusive 9.4950e-03 1.00000000 inconclusive 0.0617674 1.5526e-01 insignificant 1.0000e+00 insignificant 0.371615 0.701014 -0.2426879 6 0.387259 0.617204 -0.2299447 9.9997e-01 1.0816e-20 hypomethylated 1.0000e+00 1.0816e-17 hypomethylated 9.9998e-01 1.7245e-11 hypomethylated 1.0000e+00 1.7245e-08 hypomethylated -0.2755705 4.9200e-05 hypomethylated 0.00983992 hypomethylated 0.419578 0.3998153 -0.0051910 8 0.413421 0.4037040 0.0097173 1.3416e-05 1.4083e-02 weaklyHypometh 2.3957e-04 1.00000000 weaklyHypometh 4.2241e-03 0.09326251 inconclusive 7.1426e-02 1.00000 inconclusive 0.0594627 2.2439e-01 insignificant 1.0000e+00 insignificant 0.419578 0.701014 -0.23523644 6 0.413421 0.617204 -0.2037829 9.9990e-01 1.3121e-15 hypomethylated 1.0000e+00 1.3121e-12 hypomethylated 1.0000e+00 6.9466e-10 hypomethylated 1.0000e+00 6.9466e-07 hypomethylated -0.27787516 3.7126e-05 hypomethylated 0.037126 hypomethylated 0.3998153 0.701014 -0.1918233 6 0.4037040 0.617204 -0.2135002 0.9998594 5.4820e-14 weaklyHypometh 1.00000 3.2247e-12 weaklyHypometh 0.9993211 5.8526e-06 weaklyHypometh 1 3.2514e-04 weaklyHypometh -0.3373379 3.8684e-05 hypomethylated 0.0027631 hypomethylated chr12 130030923 130031923 43158 GPR133 ENSG00000111452 0.788894 146 6 0.579398 62 6 0.566667 30 6 0.858333 109 6 0.689744 64 5 0.835617 153 6 0.785714 41 4 0.747271 106 6 0.964286 26 2 0.757143 38 6 0.915509 183 6 0.604167 13 0 0.734848 54 6 0.784722 27 2 0.806013 64 6 0.562500 16 0 0.638889 13 0 0.866162 120 6 0.854828 77 6 0.80668 79 6 0.86111 35 6 0.92063 38 6 0.768434 67 6 0.856481 38 4 0.895692 44 5 0.761255 97 6 0.885568 49 5 1.000000 11 0 0.769048 52 6 0.85045 86 6 0.766667 69 6 0.830117 224 6 0.778030 114 6 0.705556 72 6 0.7466685 127 6 1.0000000 12 2 0.773611 29 3 0.784059 122 6 0.830357 93 6 0.875397 89 6 0.87083 88 6 0.846032 57 6 0.888160 137 6 0.802646 0.682900 0.554839 0.877419 0.711580 0.846081 0.919355 0.765403 0.970430 0.756068 0.906150 0.698174 0.75595 0.808244 0.814831 0.662331 0.661290 0.880417 0.858743 0.816608 0.844086 0.927547 0.789166 0.877240 0.894521 0.770148 0.869238 0.967469 0.785023 0.825068 0.789443 0.818173 0.7987292 0.7096774 0.7731483 0.8206381 0.776523 0.7961328 0.825941 0.877983 0.878808 0.856631 0.89800 0 0.801548 0.813580 -0.01034818 6 0.762093 0.841870 -0.07977627 0.931590 0.30920714 insignificant 1 1.00000 insignificant 0.998507 0.05628432 insignificant 1 1.00000 insignificant -0.0897521 0.0124112 lowCoverage 1 lowCoverage 0.802399 0.7878151 0.036830 6 0.805776 0.7726070 0.0331687 8.7687e-02 8.1491e-01 insignificant 8.0447e-01 1.0000e+00 insignificant 1.9495e-01 9.6207e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0406180 4.3343e-01 lowCoverage 1.0000e+00 lowCoverage 0.801548 0.855603 -0.0532697 6 0.762093 0.878195 -0.1161014 9.9789e-01 7.7600e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9942e-01 5.2845e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.1047862 1.1685e-03 lowCoverage 0.11684916 lowCoverage 0.812887 0.7878151 0.0449301 6 0.815515 0.7726070 0.0429077 8.8770e-03 9.3175e-01 weaklyHypermeth 1.0109e-01 1.00000000 insignificant 8.0617e-03 0.99768311 weaklyHypermeth 1.2596e-01 1.00000 insignificant 0.0491341 3.2912e-01 lowCoverage 1.0000e+00 lowCoverage 0.813580 0.855603 -0.04296691 6 0.841870 0.878195 -0.0363251 9.9804e-01 2.2662e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8476e-01 6.1638e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01503414 5.3481e-01 insignificant 1.000000 insignificant 0.7878151 0.855292 -0.0811019 6 0.7726070 0.857894 -0.0852870 0.9969157 9.8136e-04 weaklyHypometh 1.00000 1.7217e-02 weaklyHypometh 0.9999384 4.5879e-03 weaklyHypometh 1 8.9959e-02 weaklyHypometh -0.0641683 1.9295e-01 lowCoverage 1.0000000 lowCoverage chr12 130076423 130077423 43160 GPR133 ENSG00000111452 0.931185 387 10 0.804078 361 10 0.829736 325 11 0.898235 229 8 0.896493 249 11 0.864909 403 11 0.888096 408 11 0.909312 311 11 0.820927 311 11 0.941542 231 11 0.867510 353 11 0.853295 251 8 0.917326 258 11 0.942857 32 3 0.929310 344 11 0.946299 145 6 0.912301 118 5 0.795522 406 10 0.916753 380 11 0.93276 238 10 0.76655 167 11 0.94286 28 3 0.829885 161 11 0.829870 88 5 0.810335 445 7 0.948848 390 11 0.914103 82 7 0.883200 94 8 0.848444 322 11 0.91984 425 9 0.895282 419 11 0.953594 333 11 0.897236 349 11 0.940149 305 11 0.7720202 201 9 0.8061087 286 8 0.761263 161 9 0.902115 478 11 0.898004 311 11 0.888731 223 11 0.83442 282 8 0.872954 227 10 0.864525 284 10 0.923065 0.791289 0.853519 0.878718 0.911162 0.933052 0.884317 0.916033 0.900832 0.912220 0.872790 0.852377 0.87815 0.924115 0.925637 0.921564 0.895600 0.881298 0.927968 0.935022 0.885872 0.949542 0.912508 0.888075 0.918915 0.944885 0.948763 0.891568 0.863165 0.919009 0.893888 0.926520 0.9050177 0.9331681 0.7585771 0.7369110 0.928774 0.9039618 0.884536 0.890676 0.894491 0.924329 0.92859 2 0.897333 0.905213 -0.00905151 11 0.897609 0.859159 0.03844987 0.974301 0.60554938 insignificant 1 1.00000 insignificant 0.941408 0.76152936 insignificant 1 1.00000 insignificant 0.0113547 0.5874085 insignificant 1 insignificant 0.897431 0.8690275 0.023873 11 0.897011 0.7707075 0.1263033 3.0823e-01 5.1127e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.2550e-01 5.1533e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0434403 2.3204e-01 insignificant 1.0000e+00 insignificant 0.897293 0.907310 -0.0135783 10 0.880936 0.845956 0.0349803 9.1122e-01 3.0793e-03 weaklyHypometh 1.0000e+00 4.3990e-01 insignificant 3.8347e-01 2.1881e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 0.0181946 2.5724e-01 insignificant 1.00000000 insignificant 0.906314 0.8695163 0.0303767 11 0.928878 0.8220880 0.1067903 2.8076e-01 8.9967e-01 insignificant 1.0000e+00 1.00000000 insignificant 4.7021e-01 0.70650964 insignificant 1.0000e+00 1.00000 insignificant 0.0320856 3.9355e-01 insignificant 1.0000e+00 insignificant 0.905167 0.907310 -0.00016148 10 0.860244 0.845956 0.0142882 5.8339e-01 8.0040e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 6.6811e-01 2.7702e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00683986 7.4621e-01 insignificant 1.000000 insignificant 0.8699095 0.908610 -0.0369144 10 0.8786048 0.908857 -0.0302523 0.9329886 5.4603e-03 weaklyHypometh 1.00000 8.1497e-02 weaklyHypometh 0.5482639 1.2538e-01 insignificant 1 1.0000e+00 insignificant -0.0252457 4.7131e-01 insignificant 1.0000000 insignificant chr12 130105123 130106123 43162 ENSG00000187909 0.848320 421 10 0.899424 929 10 0.855933 339 10 0.870167 277 8 0.857110 262 10 0.903941 587 10 0.734628 359 10 0.828256 386 10 0.829748 345 10 0.873448 256 9 0.927431 709 10 0.794290 181 5 0.703567 390 10 0.793026 112 7 0.835695 293 10 0.815549 206 8 0.838224 170 5 0.711805 390 8 0.917171 809 10 0.93104 607 10 0.95526 200 10 0.84838 79 7 0.849189 388 11 0.777500 230 10 0.898815 78 8 0.836846 785 10 0.797158 234 10 0.857213 134 8 0.942861 746 10 0.96109 862 10 0.956056 855 10 0.847630 671 10 0.731189 598 10 0.732879 353 10 0.7200447 400 10 0.6489899 55 4 0.800961 322 11 0.837438 775 10 0.836747 523 10 0.870107 508 10 0.84031 330 8 0.703295 406 8 0.917638 315 8 0.918065 0.886777 0.903486 0.934125 0.949718 0.901328 0.872145 0.915713 0.894502 0.946782 0.927054 0.840239 0.89410 0.880865 0.929136 0.863177 0.870571 0.789985 0.930916 0.922842 0.949032 0.847076 0.938469 0.890910 0.880317 0.918574 0.913404 0.914304 0.926729 0.947736 0.946161 0.944272 0.7576251 0.6668721 0.5967839 0.7624884 0.859041 0.8663372 0.904211 0.863375 0.915204 0.731028 0.87814 8 0.906452 0.934436 -0.02561359 10 0.715744 0.872512 -0.15676776 0.995023 0.00006504 weaklyHypometh 1 0.06504 weaklyHypometh 0.964173 0.00096083 weaklyHypometh 1 0.96083 insignificant -0.0388953 0.1134150 insignificant 1 insignificant 0.907006 0.7994407 0.110102 10 0.827697 0.7146724 0.1130250 7.8480e-09 1.0000e+00 weaklyHypermeth 1.7836e-07 1.0000e+00 weaklyHypermeth 1.9163e-03 9.9993e-01 weaklyHypermeth 3.3619e-02 1.00000000 weaklyHypermeth 0.0931883 1.5775e-02 weaklyHypermeth 3.3564e-01 insignificant 0.907006 0.887128 0.0229600 8 0.827697 0.790100 0.0375976 5.3477e-03 9.3091e-01 weaklyHypermeth 2.3854e-01 1.0000e+00 insignificant 4.6578e-02 8.9548e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.0048194 9.0514e-01 insignificant 1.00000000 insignificant 0.934386 0.7994407 0.1321172 10 0.849332 0.7146724 0.1346596 6.6088e-10 1.0000e+00 weaklyHypermeth 1.7862e-08 1.00000000 weaklyHypermeth 2.7182e-05 0.99999244 weaklyHypermeth 7.9948e-04 1.00000 weaklyHypermeth 0.1320836 2.4642e-03 weaklyHypermeth 6.6600e-02 weaklyHypermeth 0.934386 0.887128 0.04711809 8 0.849332 0.790100 0.0592322 1.1809e-04 9.9940e-01 weaklyHypermeth 6.9463e-03 1.0000e+00 weaklyHypermeth 5.6062e-03 9.9988e-01 weaklyHypermeth 3.1146e-01 1.0000e+00 insignificant 0.04371464 3.1637e-01 insignificant 1.000000 insignificant 0.7994407 0.887128 -0.0848318 8 0.7146724 0.790100 -0.0754275 0.9997718 5.4017e-02 insignificant 1.00000 5.5688e-01 insignificant 0.9913874 4.5806e-01 insignificant 1 1.0000e+00 insignificant -0.0883689 8.4305e-02 insignificant 1.0000000 insignificant chr12 130178823 130179823 43164 GPR133 ENSG00000111452 0.775328 72 4 0.775275 51 4 0.500000 11 0 0.795455 27 2 0.750000 4 0 0.389286 37 5 0.500000 6 0 0.846387 125 10 0.674074 20 2 0.752381 16 1 0.820457 220 10 0.750000 4 0 0.919954 177 9 0.970370 41 4 0.874286 20 2 0.666667 3 0 0.000000 2 0 0.778206 69 4 0.980768 149 8 0.74321 68 6 0.83712 47 3 0.81324 34 3 0.492593 21 2 0.488095 21 2 0.967408 129 3 0.887913 221 11 0.832275 57 3 0.000000 7 0 0.952794 113 8 0.94444 166 9 0.896759 159 10 0.797258 50 6 0.673810 27 2 0.887910 142 8 0.0000000 3 0 0.4285714 11 0 0.900000 37 3 0.841131 307 10 0.733333 15 1 1.000000 20 2 0.50000 9 0 1.000000 2 0 0.555556 7 0 0.500000 0.636364 NA 0.500000 NA 0.500000 0.500000 0.888889 1.000000 0.600000 0.781250 1.000000 0.88000 0.833333 1.000000 NA 0.000000 1.000000 0.941176 0.500000 1.000000 0.750000 0.333333 0.250000 0.947368 0.880000 0.800000 0.000000 0.888889 0.888889 0.851852 0.666667 1.0000000 0.6666667 NA 0.0000000 0.700000 0.5555556 1.000000 1.000000 1.000000 1.000000 NA 0 0.827648 0.866341 -0.03542198 4 0.820229 0.859305 -0.03907662 0.966708 0.16799959 lowCoverage 1 1.00000 lowCoverage 0.936435 0.40032926 lowCoverage 1 1.00000 lowCoverage -0.0293867 0.7631361 lowCoverage 1 lowCoverage 0.827094 0.7969639 0.029579 4 0.814376 0.7981683 0.0162080 4.7640e-01 7.0643e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 2.6725e-01 7.6754e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 0.0912014 5.7120e-01 lowCoverage 1.0000e+00 lowCoverage 0.830285 0.830189 0.0052790 0 0.824572 0.721759 0.1028131 7.8310e-03 2.1283e-01 noCoverage 2.9426e-01 1.0000e+00 noCoverage 5.9723e-01 4.4736e-02 noCoverage 1.0000e+00 1.0000e+00 noCoverage -0.0446726 7.1705e-01 lowCoverage 1.00000000 lowCoverage 0.866341 0.7980952 0.0714750 7 0.859305 0.8252746 0.0340308 9.0537e-02 9.0874e-01 insignificant 8.2307e-01 1.00000000 insignificant 2.0385e-01 0.95210876 insignificant 1.0000e+00 1.00000 insignificant 0.1205881 4.8672e-01 lowCoverage 1.0000e+00 lowCoverage 0.855530 0.830189 0.02729966 0 0.842018 0.721759 0.1202586 7.4021e-02 2.5577e-01 noCoverage 1.0000e+00 1.0000e+00 noCoverage 5.7718e-01 3.0365e-02 noCoverage 1.0000e+00 1.0000e+00 noCoverage -0.01528594 9.1169e-01 lowCoverage 1.000000 lowCoverage 0.7899344 0.830189 -0.0347915 0 0.8226697 0.721759 0.1009105 0.0094395 4.3549e-02 noCoverage 1.00000 4.6463e-01 noCoverage 0.8747530 1.2143e-01 noCoverage 1 1.0000e+00 noCoverage -0.1358740 4.6781e-01 lowCoverage 1.0000000 lowCoverage chr12 130180423 130181423 43165 GPR133 ENSG00000111452 0.777778 10 0 0.750000 18 0 0.523260 51 5 0.642857 29 2 0.825000 18 0 0.617708 47 3 0.222222 14 1 0.657475 100 6 0.866667 10 1 0.788889 29 1 0.833918 182 9 0.570000 28 1 0.801418 103 7 0.988889 47 6 0.691667 22 1 0.591954 32 1 0.056452 34 1 0.630911 63 4 0.677339 209 8 0.68182 27 1 0.77500 27 1 0.65820 49 3 0.615385 14 0 0.731250 26 3 0.813128 150 12 0.921380 101 7 0.943035 130 8 0.128205 18 0 0.888513 139 7 0.73090 99 7 0.886597 121 7 0.738333 30 2 0.947917 30 2 0.763935 207 10 1.0000000 16 0 0.4647059 38 2 0.666440 77 8 0.906839 247 11 0.937500 14 0 0.836695 50 4 0.53571 14 1 0.666667 7 0 0.708333 13 2 NA 1.000000 0.600000 0.333333 1.000000 0.500000 0.333333 0.833333 NA 0.666667 0.916667 1.000000 0.84615 0.900000 1.000000 0.500000 NA 0.888889 0.966667 0.500000 1.000000 0.857143 1.000000 1.000000 0.964286 0.851852 0.947368 0.000000 1.000000 0.846154 0.909091 0.700000 0.8333333 0.8823529 NA 0.0000000 0.846154 0.9615385 1.000000 0.700000 0.000000 1.000000 0.83333 0 0.723881 0.872647 -0.07865302 5 0.719820 0.647899 0.07192096 0.998052 0.00795717 weaklyHypometh 1 0.83417 insignificant 0.747010 0.42431000 insignificant 1 1.00000 insignificant -0.0760161 0.3446409 lowCoverage 1 lowCoverage 0.723684 0.8045603 -0.019261 5 0.655670 0.7183438 -0.0626737 9.7108e-01 6.5676e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8805e-01 7.2111e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.1318284 2.0119e-01 lowCoverage 1.0000e+00 lowCoverage 0.725730 0.845361 -0.0680881 0 0.701858 0.795443 -0.0935854 8.4859e-01 1.8681e-02 noCoverage 1.0000e+00 9.3407e-01 noCoverage 9.5373e-01 1.3611e-01 noCoverage 1.0000e+00 1.0000e+00 noCoverage -0.0771706 3.8515e-01 lowCoverage 1.00000000 lowCoverage 0.876392 0.8042414 0.0616788 7 0.778623 0.7007403 0.0778830 2.9271e-01 9.1458e-01 insignificant 1.0000e+00 1.00000000 insignificant 7.7148e-01 0.86274003 insignificant 1.0000e+00 1.00000 insignificant -0.0558123 6.0142e-01 lowCoverage 1.0000e+00 lowCoverage 0.877252 0.845361 -0.00898744 0 0.733169 0.795443 -0.0622745 9.3682e-01 4.1105e-01 noCoverage 1.0000e+00 1.0000e+00 noCoverage 9.9819e-01 1.7523e-01 noCoverage 1.0000e+00 1.0000e+00 noCoverage -0.00115459 9.9039e-01 lowCoverage 1.000000 lowCoverage 0.8055556 0.852632 -0.0403095 0 0.7474564 0.815139 -0.0676831 0.9785835 3.4724e-01 noCoverage 1.00000 1.0000e+00 noCoverage 0.9951495 5.9389e-01 noCoverage 1 1.0000e+00 noCoverage 0.0546577 6.2459e-01 lowCoverage 1.0000000 lowCoverage chr12 130285623 130286623 43170 ENSG00000204603 0.921151 325 8 0.788945 218 7 0.835753 225 9 0.792743 226 8 0.830768 228 8 0.871367 502 8 0.842663 220 8 0.803249 219 9 0.741696 185 8 0.876764 213 8 0.875916 459 9 0.839444 130 7 0.917821 186 8 0.763070 96 4 0.752768 287 9 0.828633 141 8 0.505882 24 1 0.823572 464 6 0.909059 275 6 0.90271 300 8 0.85800 145 9 0.69880 90 5 0.856023 230 7 0.943261 136 8 0.916876 78 7 0.761683 409 9 0.830617 182 8 0.756424 150 7 0.827533 248 5 0.90960 451 9 0.785830 364 9 0.905806 349 8 0.511690 271 7 0.402844 283 6 0.5555960 410 7 0.7642857 27 1 0.672173 286 8 0.698622 445 8 0.924533 370 8 0.883563 319 8 0.84153 221 6 0.785754 544 6 0.875622 238 8 0.903956 0.802971 0.874000 0.846280 0.798119 0.842511 0.862360 0.806539 0.842520 0.889613 0.889097 0.850788 0.90938 0.843898 0.859472 0.871338 0.657979 0.848639 0.905772 0.920213 0.871695 0.772539 0.866758 0.911699 0.890498 0.857392 0.845778 0.901019 0.876316 0.931206 0.883422 0.895719 0.5413081 0.4959991 0.6680164 0.6168647 0.603389 0.7263484 0.926015 0.880007 0.849988 0.877532 0.91081 4 0.856388 0.876059 -0.02053275 7 0.804811 0.784613 0.02019722 0.981607 0.30219664 insignificant 1 1.00000 insignificant 0.966988 0.38126091 insignificant 1 1.00000 insignificant -0.0163391 0.5890299 insignificant 1 insignificant 0.856533 0.6085947 0.253207 7 0.865773 0.6311194 0.2346534 9.4883e-22 1.0000e+00 hypermethylated 3.9535e-20 1.0000e+00 hypermethylated 4.8988e-08 9.9999e-01 hypermethylated 2.1299e-06 1.00000000 hypermethylated 0.2203301 8.2409e-03 weaklyHypermeth 1.8729e-01 insignificant 0.856504 0.876478 -0.0169682 8 0.865773 0.789493 0.0762800 9.7302e-01 2.5104e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8525e-01 1.7987e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0410025 2.1189e-01 insignificant 1.00000000 insignificant 0.876635 0.6085947 0.2658072 7 0.841536 0.6311194 0.2104167 7.1571e-18 9.9996e-01 hypermethylated 2.6952e-16 1.00000000 hypermethylated 3.3479e-08 0.99997612 hypermethylated 1.7621e-06 1.00000 hypermethylated 0.2366693 5.7891e-03 weaklyHypermeth 1.4120e-01 insignificant 0.877435 0.876478 0.00550165 7 0.884393 0.789493 0.0949004 6.5640e-01 4.0701e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.8990e-01 4.5656e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02466335 4.5472e-01 insignificant 1.000000 insignificant 0.6087209 0.876996 -0.2697200 7 0.6456882 0.877214 -0.2315260 0.9999997 2.9156e-09 hypomethylated 1.00000 1.0798e-07 hypomethylated 0.9999782 1.4861e-06 hypomethylated 1 9.2882e-05 hypomethylated -0.2613326 3.6121e-03 weaklyHypometh 0.1053809 insignificant chr12 130300323 130301323 43173 ENSG00000204603 0.958670 462 9 0.948925 429 9 0.745121 232 9 0.945590 205 5 0.948419 163 9 0.903420 377 8 0.923093 316 9 0.921699 188 8 0.878861 187 7 0.956216 160 9 0.880372 291 9 0.853777 110 5 0.872088 218 8 0.933333 46 4 0.901201 242 9 0.944762 51 4 0.928466 103 5 0.914799 595 8 0.914627 342 9 0.92477 416 9 0.87726 170 8 0.94444 31 3 0.945158 264 8 0.753349 124 6 0.968750 45 4 0.956434 284 7 0.933351 116 8 0.944287 143 8 0.932017 301 8 0.95410 492 9 0.938382 400 7 0.925370 298 7 0.548294 348 8 0.364005 246 7 0.0000000 105 1 0.4807692 39 3 0.605768 318 9 0.521981 376 7 0.907060 345 9 0.922921 374 9 0.92361 275 8 0.943683 466 7 0.930807 241 8 0.943875 0.940858 0.726828 0.924429 0.921994 0.897701 0.919594 0.920195 0.866571 0.920389 0.885262 0.817250 0.87016 0.919517 0.918727 0.962199 0.907497 0.914525 0.912081 0.933328 0.894980 0.872881 0.943253 0.742777 0.948569 0.964437 0.898272 0.924499 0.922953 0.961193 0.947596 0.927118 0.5406885 0.3954509 0.1185548 0.6521078 0.661417 0.5219706 0.909521 0.928445 0.912216 0.916853 0.90472 2 0.902007 0.928411 -0.02470678 8 0.902745 0.930517 -0.02777181 0.989977 0.02690424 weaklyHypometh 1 1.00000 insignificant 0.995910 0.04689738 weaklyHypometh 1 1.00000 insignificant -0.0128312 0.5275058 insignificant 1 insignificant 0.902007 0.5006983 0.375690 7 0.902745 0.4883306 0.4144145 3.3848e-45 1.0000e+00 hypermethylated 3.7609e-43 1.0000e+00 hypermethylated 7.8012e-15 1.0000e+00 hypermethylated 1.1145e-12 1.00000000 hypermethylated 0.4897744 2.7265e-03 weaklyHypermeth 7.5736e-02 weaklyHypermeth 0.902007 0.913580 -0.0218728 9 0.902745 0.927793 -0.0250476 9.6277e-01 1.5230e-02 weaklyHypometh 1.0000e+00 8.9591e-01 insignificant 6.5808e-01 1.7148e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0157050 2.1911e-01 insignificant 1.00000000 insignificant 0.928411 0.5006983 0.4188559 7 0.930517 0.4883306 0.4421863 1.2342e-31 1.0000e+00 hypermethylated 9.4937e-30 1.00000000 hypermethylated 6.2707e-13 1.00000000 hypermethylated 8.9581e-11 1.00000 hypermethylated 0.5026056 2.2495e-03 weaklyHypermeth 6.2486e-02 weaklyHypermeth 0.928411 0.913580 0.00682643 8 0.930517 0.927793 0.0027242 3.6122e-01 4.0264e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.0049e-01 8.1809e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00287379 8.7377e-01 insignificant 1.000000 insignificant 0.5006983 0.913580 -0.4460401 7 0.4883306 0.927793 -0.4394621 1.0000000 1.0001e-17 hypomethylated 1.00000 9.0920e-16 hypomethylated 1.0000000 9.7474e-09 hypomethylated 1 1.0830e-06 hypomethylated -0.5054794 2.4672e-03 weaklyHypometh 0.0822393 weaklyHypometh chr12 130319423 130320423 43176 ENSG00000204603 0.858416 152 4 0.894658 91 5 0.778357 51 5 0.878045 77 3 0.852183 47 3 0.825634 185 5 0.775873 61 3 0.847778 46 3 0.958333 12 1 0.925833 69 5 0.814764 144 5 0.533333 11 1 0.881270 55 3 0.904762 15 2 0.960000 48 5 NA 0 0 0.833333 9 0 0.833117 104 4 0.907500 33 3 0.87569 88 5 0.88889 45 5 0.91477 51 5 0.907689 114 5 NA 0 0 0.948551 52 2 0.876190 42 5 0.781818 21 1 0.909091 20 2 0.771111 29 4 0.85631 170 5 NA 0 0 NA 0 0 0.724613 116 5 0.277778 18 2 0.7543860 44 3 0.6815789 50 2 0.750972 77 5 0.837500 15 2 0.888368 122 4 0.916353 150 5 0.96991 112 3 0.950000 17 0 0.903466 119 5 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0.869599 0.876838 -0.01090897 5 0.848781 0.862603 -0.01382265 0.905774 0.20487042 insignificant 1 1.00000 insignificant 0.891245 0.26697419 insignificant 1 1.00000 insignificant -0.0232986 0.4336820 lowCoverage 1 lowCoverage 0.869599 0.7125000 0.144875 5 0.848781 0.6868483 0.1619324 2.4893e-05 8.2850e-01 weaklyHypermeth 3.7154e-04 1.0000e+00 weaklyHypermeth 1.2864e-02 5.3337e-01 weaklyHypermeth 1.7867e-01 1.00000000 insignificant 0.1782768 8.0764e-02 lowCoverage 1.0000e+00 lowCoverage 0.869599 0.926923 -0.0471798 5 0.848781 0.910270 -0.0614889 9.8403e-01 3.5618e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.4134e-01 7.6784e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0762054 8.5449e-03 lowCoverage 0.49647406 lowCoverage 0.876838 0.7125000 0.1414604 5 0.862603 0.6868483 0.1757551 2.3671e-04 9.4680e-01 weaklyHypermeth 3.5865e-03 1.00000000 weaklyHypermeth 2.1329e-02 0.72794066 weaklyHypermeth 2.7700e-01 1.00000 insignificant 0.2015754 5.5780e-02 lowCoverage 9.2966e-01 lowCoverage 0.876838 0.926923 -0.04225253 5 0.862603 0.910270 -0.0476662 7.8176e-01 1.8241e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.8215e-01 1.8376e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.05290678 5.7063e-02 lowCoverage 1.000000 lowCoverage 0.7125000 0.926923 -0.2035293 5 0.6868483 0.910270 -0.2234213 0.9904407 1.8089e-04 hypomethylated 1.00000 3.5468e-03 hypomethylated 0.9781143 1.7218e-02 weaklyHypometh 1 2.6489e-01 insignificant -0.2544822 2.5351e-02 lowCoverage 0.4875130 lowCoverage chr12 130451623 130452623 43182 ENSG00000212251 0.877124 54 3 0.913725 59 5 0.660000 21 3 0.817775 93 5 0.873901 56 5 0.866741 183 5 0.783333 38 4 0.855303 66 5 0.850000 33 1 0.861529 65 5 0.858713 119 5 0.733333 10 0 0.803419 55 5 0.925926 20 2 0.904121 71 5 NA 0 0 0.619048 21 3 0.961646 89 3 0.880000 30 2 0.90762 111 5 0.87006 44 3 0.81270 40 5 0.805358 118 5 0.000000 4 0 0.869565 52 3 0.730095 60 3 0.400000 14 0 0.750000 18 0 0.714286 28 3 0.88489 152 5 NA 0 0 1.000000 5 0 0.750866 102 5 0.250000 12 2 0.6666667 18 2 0.7708333 34 2 0.735689 88 5 0.708333 11 0 0.728787 104 5 0.911111 80 5 0.73671 63 5 0.898485 58 3 0.903282 115 5 0.942810 0.900000 0.750000 0.936594 0.785714 0.857771 0.875000 0.909091 0.750000 0.916667 0.947222 1.000000 0.77778 0.888889 1.000000 NA NA 0.964115 0.950000 0.872283 0.894444 0.888889 0.753870 0.000000 0.804348 0.416667 0.750000 1.000000 0.785714 1.000000 NA 1.000000 0.5937500 0.2500000 0.5000000 0.6562500 0.780538 0.6666667 0.910428 0.861111 0.815789 0.776515 0.88000 0 0.874790 0.825516 0.03395587 5 0.850413 0.816518 0.03389480 0.063878 0.90776393 insignificant 1 1.00000 insignificant 0.203801 0.93100533 insignificant 1 1.00000 insignificant 0.1271954 0.1713241 lowCoverage 1 lowCoverage 0.874895 0.7424242 0.129188 5 0.875344 0.8073933 0.0679506 3.7504e-04 9.2440e-01 weaklyHypermeth 4.6880e-03 1.0000e+00 weaklyHypermeth 9.9012e-02 8.2020e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.1925803 6.2782e-02 lowCoverage 9.5124e-01 lowCoverage 0.874790 0.878571 0.0020533 5 0.850413 0.847157 0.0032558 5.2515e-01 5.8513e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.7135e-01 6.2941e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0039710 9.3500e-01 lowCoverage 1.00000000 lowCoverage 0.826168 0.7386364 0.0681478 5 0.847098 0.6407267 0.2063716 1.7411e-01 8.7203e-01 insignificant 1.0000e+00 1.00000000 insignificant 4.9121e-01 0.76480217 insignificant 1.0000e+00 1.00000 insignificant 0.0653849 5.8521e-01 lowCoverage 1.0000e+00 lowCoverage 0.825516 0.878571 -0.03317588 5 0.816518 0.847157 -0.0306390 9.1435e-01 3.2687e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7231e-01 2.6656e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.12322436 2.1407e-01 lowCoverage 1.000000 lowCoverage 0.7414449 0.878571 -0.1193927 5 0.7688720 0.847157 -0.0782850 0.9286117 3.8458e-02 weaklyHypometh 1.00000 4.2735e-01 insignificant 0.9497156 2.0976e-01 insignificant 1 1.0000e+00 insignificant -0.1886093 7.4968e-02 lowCoverage 0.9995742 lowCoverage chr12 130478923 130479923 43185 ENSG00000212251 0.902886 279 7 0.685284 219 8 0.671805 254 8 0.799944 258 7 0.815402 227 8 0.878928 545 8 0.809917 265 8 0.830303 244 7 0.751495 215 8 0.884214 201 8 0.831919 425 8 0.839053 131 7 0.904927 163 6 0.822211 145 6 0.596812 217 8 0.800926 86 7 0.677083 30 2 0.776607 467 6 0.891370 345 7 0.88784 319 7 0.77051 198 8 0.76134 87 5 0.889987 275 8 0.868586 142 8 0.743827 54 5 0.871884 347 8 0.661310 214 7 0.606257 95 8 0.823320 290 7 0.82826 391 8 0.894619 464 8 0.833998 305 8 0.622102 251 8 0.537799 328 7 0.4384073 444 7 0.5714286 28 1 0.503218 286 9 0.713338 426 8 0.687119 354 8 0.764141 336 8 0.87104 268 7 0.753279 686 5 0.822974 316 8 0.876226 0.720371 0.682806 0.844668 0.773462 0.881081 0.835889 0.818433 0.788717 0.894807 0.865072 0.849003 0.89442 0.872686 0.806448 0.947214 0.770031 0.867452 0.910585 0.875611 0.789494 0.869079 0.877388 0.903076 0.903090 0.901196 0.769549 0.880608 0.844215 0.922004 0.903185 0.916666 0.6156527 0.3771878 0.3886198 0.6528892 0.562509 0.5700305 0.863324 0.841998 0.860888 0.877984 0.88796 5 0.834327 0.867925 -0.03438511 8 0.771581 0.680910 0.09067043 0.782519 0.01741308 weaklyHypometh 1 1.00000 insignificant 0.957737 0.05945535 insignificant 1 1.00000 insignificant 0.0067878 0.8376599 insignificant 1 insignificant 0.834328 0.5093590 0.338656 8 0.765967 0.5036541 0.2623128 9.0110e-25 9.4229e-01 hypermethylated 4.2910e-23 1.0000e+00 hypermethylated 2.9192e-07 9.9859e-01 hypermethylated 1.1180e-05 1.00000000 hypermethylated 0.2385645 6.9685e-04 hypermethylated 2.3228e-02 hypermethylated 0.834824 0.840306 -0.0040905 8 0.841724 0.681250 0.1604745 2.0237e-01 8.1282e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.4338e-01 8.5507e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0232356 5.4828e-01 insignificant 1.00000000 insignificant 0.868182 0.5093590 0.3603064 8 0.697357 0.5036541 0.1937027 4.9132e-21 9.9277e-01 hypermethylated 2.3396e-19 1.00000000 hypermethylated 2.7894e-07 0.99852850 hypermethylated 1.1157e-05 1.00000 hypermethylated 0.2317767 6.7393e-04 hypermethylated 2.4069e-02 hypermethylated 0.870617 0.840306 0.03759395 8 0.733720 0.681250 0.0524704 6.0442e-03 8.0084e-01 weaklyHypermeth 2.0147e-01 1.0000e+00 insignificant 8.3637e-02 8.5611e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01644783 6.9677e-01 insignificant 1.000000 insignificant 0.5091116 0.840735 -0.3393700 8 0.4968767 0.749375 -0.2524984 0.9995701 7.5007e-10 hypomethylated 1.00000 2.8849e-08 hypomethylated 0.9995610 2.6078e-04 hypomethylated 1 7.9025e-03 hypomethylated -0.2153289 2.0633e-03 weaklyHypometh 0.0736898 weaklyHypometh chr12 130641973 130642973 43188 ENSG00000212251 0.842553 391 13 0.902931 279 11 0.585600 371 13 0.852425 348 9 0.830642 182 9 0.857497 453 11 0.741409 281 13 0.726595 262 11 0.858039 262 11 0.911507 310 13 0.917307 330 11 0.877869 186 12 0.896648 378 13 0.778195 55 3 0.895681 328 13 0.821222 127 12 0.673407 124 8 0.945986 503 9 0.921027 205 11 0.92962 291 11 0.81221 183 11 0.89761 167 8 0.908696 311 11 0.707121 133 11 0.860252 161 9 0.845337 381 11 0.833272 198 13 0.753027 114 11 0.739487 201 9 0.95995 373 11 0.837478 309 11 0.945330 430 13 0.779910 322 15 0.591870 308 13 0.8072021 128 5 0.7697943 139 8 0.743400 173 12 0.768624 329 11 0.946744 346 13 0.969625 311 11 0.92802 384 11 0.926044 338 11 0.931211 396 11 0.867037 0.860317 0.827614 0.947079 0.878851 0.888983 0.718324 0.873203 0.827005 0.902227 0.887985 0.917766 0.92496 0.915425 0.896907 0.833777 0.680981 0.918645 0.857868 0.950644 0.943108 0.900093 0.898630 0.773570 0.929823 0.917445 0.834381 0.868650 0.927168 0.937364 0.883353 0.924085 0.7255033 0.5619770 0.7386037 0.6594712 0.720554 0.7608663 0.914779 0.940393 0.928741 0.937752 0.90501 9 0.884025 0.906049 -0.02160545 11 0.800683 0.831637 -0.03095428 0.621074 0.01131327 weaklyHypometh 1 0.92370 insignificant 0.658458 0.04707032 weaklyHypometh 1 1.00000 insignificant -0.0033400 0.9156152 insignificant 1 insignificant 0.884025 0.7283774 0.161645 11 0.800683 0.7095148 0.0911683 1.7087e-18 9.9946e-01 weaklyHypermeth 5.8922e-17 1.0000e+00 weaklyHypermeth 6.9465e-09 9.9987e-01 weaklyHypermeth 3.6561e-07 1.00000000 weaklyHypermeth 0.0948415 3.1277e-02 weaklyHypermeth 5.3012e-01 insignificant 0.884765 0.934648 -0.0485602 11 0.829292 0.937617 -0.1083245 1.0000e+00 6.4510e-04 weaklyHypometh 1.0000e+00 1.6128e-01 insignificant 1.0000e+00 2.3226e-03 weaklyHypometh 1.0000e+00 4.2957e-01 insignificant -0.1020201 1.6058e-04 weaklyHypometh 0.02294053 weaklyHypometh 0.906049 0.7283774 0.1786675 11 0.831637 0.7095148 0.1221225 2.1989e-17 9.9865e-01 weaklyHypermeth 7.8530e-16 1.00000000 weaklyHypermeth 6.9825e-08 0.99888047 weaklyHypermeth 3.3250e-06 1.00000 weaklyHypermeth 0.0981814 2.9626e-02 weaklyHypermeth 5.5248e-01 insignificant 0.907213 0.934648 -0.01993369 9 0.859321 0.937617 -0.0782960 9.9726e-01 2.7818e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9816e-01 1.1141e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.09868010 1.3399e-03 weaklyHypometh 0.227920 insignificant 0.7302726 0.934648 -0.2088308 9 0.7378212 0.937617 -0.1997957 1.0000000 3.3759e-11 hypomethylated 1.00000 1.4066e-09 hypomethylated 1.0000000 1.8002e-09 hypomethylated 1 2.8758e-07 hypomethylated -0.1968615 1.1336e-03 weaklyHypometh 0.0472323 weaklyHypometh chr12 130732073 130733073 43190 ENSG00000212154 0.828933 385 7 0.801539 229 7 0.673121 181 7 0.831384 303 6 0.621998 74 6 0.799629 397 7 0.808943 152 6 0.761673 156 7 0.717406 175 7 0.750971 180 7 0.724393 183 7 0.787719 136 7 0.543771 204 7 0.900000 33 4 0.683072 140 6 0.703279 104 7 0.513327 101 6 0.732447 442 7 0.589068 130 6 0.67874 310 7 0.83915 99 7 0.57742 222 7 0.732341 267 7 0.717679 114 7 0.814160 132 7 0.801600 213 7 0.510396 147 7 0.853228 89 7 0.736596 133 7 0.64056 196 6 0.709910 208 7 0.826816 316 7 0.374063 229 7 0.315016 158 7 0.3930975 177 5 0.4030405 122 7 0.536550 112 6 0.385409 191 7 0.752002 447 7 0.758204 413 7 0.74287 329 7 0.726613 442 7 0.782656 388 7 0.798063 0.728087 0.704890 0.808995 0.600332 0.746015 0.765110 0.710707 0.705301 0.744164 0.690565 0.774947 0.51283 0.844599 0.669509 0.698803 0.496456 0.735314 0.520894 0.689861 0.823588 0.574627 0.693277 0.662546 0.779537 0.759290 0.567933 0.878396 0.733816 0.589924 0.652056 0.810313 0.3682555 0.3270192 0.3564686 0.4113336 0.533801 0.4333498 0.765187 0.758675 0.733071 0.741174 0.77012 6 0.706600 0.701779 0.00641966 7 0.760956 0.638689 0.12226717 0.868536 0.78841951 insignificant 1 1.00000 insignificant 0.711202 0.58734148 insignificant 1 1.00000 insignificant -0.0074179 0.8487905 insignificant 1 insignificant 0.706381 0.3447927 0.357206 7 0.726807 0.3744688 0.3523381 1.3027e-27 1.0000e+00 hypermethylated 6.8562e-26 1.0000e+00 hypermethylated 5.9070e-12 1.0000e+00 hypermethylated 4.5438e-10 1.00000000 hypermethylated 0.3213747 2.7576e-06 hypermethylated 1.6651e-04 hypermethylated 0.706381 0.733036 -0.0318072 7 0.726807 0.748640 -0.0218330 7.0947e-01 9.8060e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 7.8729e-01 3.6978e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0298978 2.3003e-01 insignificant 1.00000000 insignificant 0.702108 0.3447927 0.3504058 7 0.729930 0.3744688 0.3554613 5.9644e-20 1.0000e+00 hypermethylated 2.5932e-18 1.00000000 hypermethylated 1.4216e-12 1.00000000 hypermethylated 1.7770e-10 1.00000 hypermethylated 0.3287926 2.2580e-06 hypermethylated 1.4873e-04 hypermethylated 0.702108 0.733036 -0.03118770 7 0.729930 0.748640 -0.0187098 6.7791e-01 1.7789e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.5388e-01 3.9497e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02247991 5.0248e-01 insignificant 1.000000 insignificant 0.3447927 0.733036 -0.3813892 7 0.3744688 0.748640 -0.3741711 1.0000000 1.6124e-15 hypomethylated 1.00000 1.1517e-13 hypomethylated 1.0000000 2.0131e-09 hypomethylated 1 2.8758e-07 hypomethylated -0.3512725 3.2209e-05 hypomethylated 0.0024776 hypomethylated chr12 130749973 130750973 43191 ENSG00000212154 0.888527 558 4 0.791412 320 4 0.761986 144 6 0.961661 458 4 0.857143 73 4 0.887278 452 6 0.809722 104 6 0.859524 79 4 0.874930 59 5 0.922222 65 4 0.886637 281 6 0.764785 59 3 0.914225 55 3 0.916667 16 2 0.916980 58 2 0.988889 27 2 0.873064 905 5 0.893725 410 4 0.703296 189 4 0.94688 444 6 0.86693 36 4 0.95833 22 2 0.895724 136 5 0.939484 94 5 0.911247 85 3 0.877887 302 6 0.810245 47 5 1.000000 37 3 0.752199 159 4 0.92079 252 6 0.869057 250 4 0.891139 444 6 0.514950 296 6 0.621212 64 4 0.4509804 271 4 0.5739684 140 2 0.605823 243 6 0.502621 305 4 0.847283 613 4 0.917884 469 4 0.94365 960 4 0.944033 229 3 0.797213 567 4 0.886428 0.732569 0.694453 0.935536 0.903741 0.868129 0.836667 0.858027 0.850260 0.878730 0.892924 0.678955 0.88770 0.820778 0.937701 0.965714 0.826133 0.876417 0.837886 0.914534 0.863159 0.929762 0.827062 0.901247 0.922540 0.885175 0.771181 1.000000 0.844184 0.891113 0.865734 0.911358 0.4662016 0.5054545 0.6022409 0.5561870 0.511216 0.5628237 0.904452 0.915527 0.912947 0.920546 0.84862 1 0.865643 0.892704 -0.01918650 6 0.871624 0.888065 -0.01644078 0.785402 0.20169424 insignificant 1 1.00000 insignificant 0.701481 0.31615690 insignificant 1 1.00000 insignificant -0.0201092 0.4265092 lowCoverage 1 lowCoverage 0.865643 0.4200152 0.474643 5 0.871624 0.5284738 0.3431503 1.7007e-32 9.9955e-01 hypermethylated 1.1338e-30 1.0000e+00 hypermethylated 7.0882e-07 9.8336e-01 hypermethylated 2.5315e-05 1.00000000 hypermethylated 0.3260518 2.8307e-06 lowCoverage 1.6651e-04 lowCoverage 0.865643 0.905886 -0.0393629 4 0.871624 0.876412 -0.0047878 4.7317e-01 2.6429e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 4.3759e-01 3.4849e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0190348 5.8682e-01 lowCoverage 1.00000000 lowCoverage 0.892704 0.4200152 0.4594789 5 0.888065 0.5284738 0.3595911 8.9286e-25 1.0000e+00 hypermethylated 5.2521e-23 1.00000000 hypermethylated 1.8656e-06 0.98274949 hypermethylated 7.1753e-05 1.00000 hypermethylated 0.3461610 1.0121e-06 lowCoverage 7.7856e-05 lowCoverage 0.892704 0.905886 -0.01028456 4 0.888065 0.876412 0.0116530 5.6655e-01 4.6502e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 6.6492e-01 3.5193e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.00107442 9.7613e-01 lowCoverage 1.000000 lowCoverage 0.4200152 0.905886 -0.4970940 4 0.5284738 0.876412 -0.3479382 0.9994918 2.9090e-13 lowCoverage 1.00000 1.5310e-11 lowCoverage 0.9994300 9.0191e-05 lowCoverage 1 3.2211e-03 lowCoverage -0.3450866 1.4346e-05 lowCoverage 0.0014346 lowCoverage chr12 130921973 130922973 43195 MMP17 ENSG00000198598 0.713871 144 5 0.642404 100 5 0.426092 93 5 0.747263 192 5 0.429167 35 2 0.775553 186 5 0.581349 30 2 0.543413 111 5 0.673993 56 4 0.751547 86 5 0.809582 168 5 0.491342 30 3 0.432525 179 5 0.872549 35 4 0.384211 67 5 0.281250 18 2 0.076377 186 3 0.387566 316 5 0.483367 150 5 0.62763 141 5 0.63238 81 5 0.56470 125 4 0.658210 70 5 0.452621 63 4 0.572298 93 5 0.584313 167 5 0.563564 105 5 0.393506 40 4 0.739804 166 5 0.69949 213 5 0.625632 183 5 0.800173 167 5 0.057870 161 5 0.000000 131 5 0.0526316 205 3 0.0000000 66 4 0.110317 110 5 0.168981 205 5 0.468116 127 5 0.593424 220 5 0.51002 166 5 0.290587 173 5 0.399233 160 5 0.670211 0.492680 0.376638 0.656479 0.398006 0.688342 0.587496 0.540905 0.632364 0.689506 0.732069 0.272568 0.30575 0.825283 0.350196 0.379694 0.160261 0.344801 0.393019 0.618931 0.868630 0.477493 0.535828 0.447503 0.651611 0.631785 0.490430 0.301060 0.617725 0.631813 0.474497 0.822580 0.0388264 0.0000000 0.0223184 0.0000000 0.025592 0.0052829 0.358380 0.542545 0.423336 0.187515 0.30038 2 0.498493 0.620502 -0.11538666 5 0.556847 0.646329 -0.08948180 0.959250 0.00834170 weaklyHypometh 1 0.83417 insignificant 0.926301 0.19558769 insignificant 1 1.00000 insignificant -0.0506712 0.3683164 lowCoverage 1 lowCoverage 0.498492 0.0284738 0.473534 5 0.566321 0.1345583 0.4317628 6.6938e-23 9.9948e-01 hypermethylated 2.9104e-21 1.0000e+00 hypermethylated 2.4774e-11 9.9966e-01 hypermethylated 1.4573e-09 1.00000000 hypermethylated 0.4915858 1.8325e-09 lowCoverage 1.8325e-07 lowCoverage 0.498049 0.386525 0.1007319 5 0.565300 0.465805 0.0994947 2.4596e-02 9.7687e-01 weaklyHypermeth 6.8322e-01 1.0000e+00 insignificant 9.7651e-03 9.7871e-01 weaklyHypermeth 5.7442e-01 1.0000e+00 insignificant 0.1042762 1.5327e-01 lowCoverage 1.00000000 lowCoverage 0.620150 0.0284738 0.5961814 5 0.629050 0.1345583 0.4944916 4.8708e-27 9.9758e-01 hypermethylated 3.4791e-25 1.00000000 hypermethylated 1.8997e-10 0.99805831 hypermethylated 1.4613e-08 1.00000 hypermethylated 0.5422571 1.2321e-09 lowCoverage 1.5402e-07 lowCoverage 0.621733 0.386525 0.21178069 5 0.661527 0.465805 0.1957215 3.2016e-05 1.0000e+00 hypermethylated 2.2869e-03 1.0000e+00 hypermethylated 4.0063e-04 9.9999e-01 hypermethylated 4.0063e-02 1.0000e+00 hypermethylated 0.15494742 3.6139e-02 lowCoverage 1.000000 lowCoverage 0.0262857 0.386525 -0.3771294 5 0.0281367 0.465805 -0.4376684 1.0000000 3.2696e-17 hypomethylated 1.00000 2.7247e-15 hypomethylated 1.0000000 1.7615e-08 hypomethylated 1 1.7615e-06 hypomethylated -0.3873097 4.9325e-04 lowCoverage 0.0253225 lowCoverage chr12 131581073 131582073 43201 ENSG00000214034 0.859833 294 9 0.727982 240 8 0.686647 241 8 0.935537 266 6 0.979107 69 7 0.792663 235 10 0.815426 157 8 0.879435 139 8 0.881343 213 8 0.912992 206 8 0.856904 291 8 0.786626 133 7 0.834064 232 8 0.944056 30 3 0.851938 192 8 0.747421 42 4 0.844792 38 4 0.912222 370 8 0.882669 244 9 0.74399 204 7 0.88406 162 8 0.94011 80 3 0.828434 196 8 0.857672 85 7 0.858023 149 3 0.841518 241 8 0.822917 95 7 0.891849 105 7 0.850178 222 8 0.87244 263 9 0.829465 251 11 0.925248 290 10 0.497631 231 9 0.534282 201 8 0.5926293 348 9 0.6422619 123 6 0.586890 133 8 0.626800 325 9 0.833961 178 8 0.778487 219 10 0.85510 205 10 0.804117 237 6 0.877698 168 6 0.855189 0.906622 0.775022 0.905413 0.970010 0.879463 0.823283 0.890765 0.862287 0.895473 0.816129 0.862858 0.89333 0.908313 0.848552 0.773166 0.867357 0.893959 0.898050 0.842618 0.877994 0.904486 0.863319 0.869193 0.855248 0.862091 0.873274 0.911269 0.861189 0.936404 0.877268 0.925161 0.4986254 0.5353468 0.6760798 0.8248098 0.714423 0.7341209 0.884985 0.864958 0.909740 0.824559 0.88380 3 0.850470 0.856475 -0.01143297 8 0.860279 0.861338 -0.00105958 0.690886 0.48563455 insignificant 1 1.00000 insignificant 0.403097 0.57585532 insignificant 1 1.00000 insignificant -0.0230437 0.2706639 insignificant 1 insignificant 0.849844 0.5620867 0.251452 9 0.753569 0.5182641 0.2353052 2.0825e-20 1.0000e+00 hypermethylated 7.7129e-19 1.0000e+00 hypermethylated 7.5567e-08 1.0000e+00 hypermethylated 3.1486e-06 1.00000000 hypermethylated 0.2636998 9.7927e-07 hypermethylated 6.9948e-05 hypermethylated 0.850470 0.867925 0.0046007 7 0.860279 0.834441 0.0258381 1.7731e-02 2.5945e-01 weaklyHypermeth 5.2149e-01 1.0000e+00 insignificant 2.4142e-01 3.6282e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0139102 5.8444e-01 insignificant 1.00000000 insignificant 0.856475 0.5638376 0.2606202 8 0.861338 0.5897667 0.2715717 4.3745e-18 1.0000e+00 hypermethylated 1.8227e-16 1.00000000 hypermethylated 1.4257e-08 0.99999985 hypermethylated 8.9105e-07 1.00000 hypermethylated 0.2867435 5.3788e-06 hypermethylated 3.1640e-04 hypermethylated 0.856475 0.867925 0.01357567 6 0.861338 0.834441 0.0268976 8.3731e-02 4.5925e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.9288e-01 5.1563e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03695384 1.1677e-01 insignificant 1.000000 insignificant 0.5638376 0.867925 -0.2566731 8 0.5897667 0.834441 -0.2446741 1.0000000 2.4325e-08 hypomethylated 1.00000 7.6016e-07 hypomethylated 1.0000000 4.4427e-05 hypomethylated 1 1.7087e-03 hypomethylated -0.2497896 1.2025e-05 hypomethylated 0.0013362 hypomethylated chr12 131708673 131709673 43203 P2RX2 ENSG00000187848 0.809241 139 5 0.689046 130 4 0.584942 116 4 0.921169 106 5 0.892857 54 4 0.817327 169 5 0.570513 68 4 0.650503 130 4 0.657049 68 4 0.872835 79 4 0.846009 180 4 0.506061 44 4 0.798987 94 4 0.750725 87 4 0.596275 95 4 0.583333 32 4 0.333333 4 0 0.517216 83 5 0.898190 194 5 0.92765 95 4 0.62126 66 4 0.53252 53 4 0.903663 68 4 0.670729 86 4 0.909936 44 4 0.874114 134 5 0.788479 164 4 0.700333 90 4 0.760776 131 4 0.88208 132 5 0.809064 119 4 0.917971 139 5 0.000000 124 4 0.013889 70 4 0.0060606 178 4 0.0788114 64 3 0.028193 206 4 0.112826 153 5 0.758681 79 5 0.615940 82 5 0.78317 51 5 0.716026 83 5 0.560449 70 5 0.820377 0.623301 0.574937 0.937917 0.899592 0.844443 0.705495 0.821942 0.827475 0.871523 0.848403 0.511827 0.81613 0.767416 0.592102 0.569524 0.651919 0.467284 0.853883 0.891286 0.770685 0.534277 0.878671 0.864823 0.911011 0.877903 0.796102 0.744629 0.755260 0.855352 0.890548 0.926632 0.0000000 0.0161905 0.0064069 0.0685714 0.036894 0.0415612 0.741741 0.630084 0.734531 0.717875 0.73653 4 0.766650 0.816476 -0.05710571 4 0.708176 0.714734 -0.00655853 0.947616 0.03225913 lowCoverage 1 1.00000 lowCoverage 0.945327 0.07693478 lowCoverage 1 1.00000 lowCoverage -0.0697472 0.1923880 lowCoverage 1 lowCoverage 0.766650 0.0364780 0.734779 5 0.708176 0.0503731 0.6578027 9.9461e-41 1.0000e+00 hypermethylated 7.6508e-39 1.0000e+00 hypermethylated 1.2312e-11 1.0000e+00 hypermethylated 7.6947e-10 1.00000000 hypermethylated 0.6711998 2.2979e-14 lowCoverage 3.2827e-12 lowCoverage 0.766650 0.709589 0.0650724 5 0.708176 0.593160 0.1150157 4.1082e-02 9.5454e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 4.8639e-02 9.9038e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.0243091 6.7584e-01 lowCoverage 1.00000000 lowCoverage 0.816476 0.0364780 0.7878242 4 0.714734 0.0503731 0.6643613 1.7876e-40 1.0000e+00 lowCoverage 1.6251e-38 1.00000000 lowCoverage 1.7521e-10 1.00000000 lowCoverage 1.4601e-08 1.00000 lowCoverage 0.7409470 1.1114e-11 lowCoverage 1.8523e-09 lowCoverage 0.816476 0.709589 0.11846176 4 0.714734 0.593160 0.1215742 1.2251e-03 9.9972e-01 lowCoverage 5.8337e-02 1.0000e+00 lowCoverage 1.7254e-03 9.9994e-01 lowCoverage 1.2734e-01 1.0000e+00 lowCoverage 0.09405625 1.2457e-01 lowCoverage 1.000000 lowCoverage 0.0364780 0.709589 -0.6519004 5 0.0503731 0.593160 -0.5427871 1.0000000 1.6150e-25 hypomethylated 1.00000 2.6917e-23 hypomethylated 1.0000000 8.2600e-07 hypomethylated 1 5.8221e-05 hypomethylated -0.6468907 1.6719e-05 lowCoverage 0.0015199 lowCoverage chr12 131854573 131855573 43207 ANKLE2 ENSG00000176915 0.381446 313 8 0.368988 216 8 0.146593 195 7 0.365963 340 8 0.356214 112 4 0.528081 296 8 0.453737 124 7 0.410831 161 8 0.370217 196 8 0.254428 185 6 0.447269 266 8 0.335877 152 7 0.309939 180 8 0.238368 82 4 0.227111 168 7 0.148477 70 6 0.190122 112 4 0.311027 337 8 0.274101 158 7 0.41855 284 7 0.26020 132 7 0.40261 204 6 0.331766 221 8 0.324654 128 8 0.517165 192 8 0.359619 300 8 0.384455 242 6 0.424932 92 6 0.208757 208 8 0.25100 325 8 0.200125 296 8 0.428274 307 8 0.339065 171 8 0.416840 143 8 0.5068277 134 6 0.3242659 98 5 0.214518 175 8 0.393485 279 8 0.342585 366 7 0.355312 362 8 0.39509 303 8 0.299019 377 7 0.369883 338 8 0.247541 0.180284 0.167166 0.233036 0.179039 0.229238 0.278863 0.287222 0.256752 0.241750 0.299767 0.222273 0.24960 0.324164 0.190713 0.169215 0.216855 0.314163 0.211253 0.252388 0.296024 0.190608 0.292039 0.317223 0.385473 0.251506 0.189366 0.380778 0.185285 0.164215 0.137859 0.362829 0.2069104 0.3067565 0.3250401 0.3340979 0.217890 0.3041593 0.235306 0.213538 0.206028 0.207850 0.30014 6 0.251837 0.261050 -0.00047799 8 0.306332 0.256175 0.05015745 0.906456 0.77667398 insignificant 1 1.00000 insignificant 0.972701 0.65248591 insignificant 1 1.00000 insignificant -0.0142621 0.6988685 insignificant 1 insignificant 0.251837 0.3610000 -0.023960 8 0.306332 0.2418362 0.0644962 3.3385e-02 7.8044e-07 weaklyHypometh 3.2730e-01 2.6015e-04 weaklyHypometh 6.9250e-02 9.9137e-02 insignificant 7.6098e-01 1.00000000 insignificant -0.0389666 4.2430e-01 insignificant 1.0000e+00 insignificant 0.252041 0.215349 -0.0030114 8 0.348328 0.300431 0.0478972 4.1310e-01 1.6464e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.7112e-01 1.1158e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0255097 3.7596e-01 insignificant 1.00000000 insignificant 0.261050 0.3610000 -0.0278532 8 0.256175 0.2418362 0.0143388 3.5677e-01 6.3068e-03 weaklyHypometh 1.0000e+00 1.00000000 insignificant 1.9677e-01 0.16386224 insignificant 1.0000e+00 1.00000 insignificant -0.0247045 6.2556e-01 insignificant 1.0000e+00 insignificant 0.262114 0.215349 0.00236881 8 0.284191 0.300431 -0.0162402 5.7114e-01 4.3688e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.3850e-01 8.9481e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01124759 7.3240e-01 insignificant 1.000000 insignificant 0.3640040 0.215349 0.0270635 8 0.3092092 0.300431 0.0087779 0.0128113 1.7285e-01 weaklyHypermeth 1.00000 1.0000e+00 insignificant 0.1161439 6.1344e-01 insignificant 1 1.0000e+00 insignificant 0.0134569 7.6563e-01 insignificant 1.0000000 insignificant chr13 19892350 19893350 43223 GJB6 ENSG00000121742 0.898833 600 6 0.891736 462 6 0.605281 135 6 0.955081 489 6 0.982887 84 6 0.943117 572 6 0.970256 142 6 0.982024 168 6 0.943875 117 6 0.962599 114 6 0.936313 281 6 0.666667 54 6 0.958957 218 6 0.895022 86 4 0.892011 220 6 0.993056 58 6 0.899074 32 3 0.507289 1415 6 0.955257 500 6 0.94956 423 6 0.91974 103 6 0.90833 122 6 0.926247 312 6 0.791906 100 6 0.739952 189 6 0.936877 475 6 0.957729 150 6 0.984127 43 3 0.900402 568 6 0.95644 518 6 0.943435 640 6 0.960337 459 6 0.000000 421 6 0.000000 272 6 0.0000000 183 4 0.0133333 81 6 0.019377 393 6 0.000000 501 6 0.908155 622 6 0.854784 468 6 0.89150 482 6 0.811443 957 6 0.782400 544 6 0.899290 0.900767 0.598702 0.956502 0.978563 0.950610 0.942315 0.983800 0.951110 0.966335 0.931862 0.608359 0.96428 0.889321 0.897495 0.984391 0.901684 0.500667 0.958381 0.955932 0.915710 0.938545 0.919423 0.780595 0.748677 0.932811 0.970095 0.964323 0.893129 0.964965 0.952683 0.964860 0.0000000 0.0000000 0.0021672 0.0299690 0.016927 0.0000000 0.915237 0.853845 0.894971 0.808304 0.76167 6 0.831929 0.933406 -0.10209009 6 0.837303 0.924962 -0.08765890 0.999687 0.00104915 weaklyHypometh 1 0.30694 insignificant 0.763536 0.62298261 insignificant 1 1.00000 insignificant -0.0210162 0.5695765 insignificant 1 insignificant 0.831929 0.0027012 0.828514 6 0.837303 0.0031706 0.8341324 4.0495e-51 1.0000e+00 hypermethylated 5.0619e-49 1.0000e+00 hypermethylated 1.5237e-16 1.0000e+00 hypermethylated 2.5395e-14 1.00000000 hypermethylated 0.8839929 1.3495e-17 hypermethylated 1.3495e-14 hypermethylated 0.831929 0.849658 -0.0194289 6 0.837303 0.850821 -0.0135183 7.8441e-01 6.0259e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.8923e-04 1.0000e+00 inconclusive 3.6153e-02 1.0000e+00 inconclusive 0.0397874 3.1156e-01 insignificant 1.00000000 insignificant 0.933406 0.0027012 0.9313323 6 0.924962 0.0031706 0.9217913 2.8934e-78 1.0000e+00 hypermethylated 1.4467e-75 1.00000000 hypermethylated 2.1922e-14 1.00000000 hypermethylated 4.3845e-12 1.00000 hypermethylated 0.9050092 3.8822e-14 hypermethylated 1.2941e-11 hypermethylated 0.933406 0.849658 0.08249197 6 0.924962 0.850821 0.0741406 7.4126e-05 9.9999e-01 weaklyHypermeth 4.6329e-03 1.0000e+00 weaklyHypermeth 8.2184e-04 1.0000e+00 weaklyHypermeth 6.8487e-02 1.0000e+00 weaklyHypermeth 0.06080368 8.1777e-02 insignificant 1.000000 insignificant 0.0027012 0.849658 -0.8477881 6 0.0031706 0.850821 -0.8476508 1.0000000 8.2760e-48 hypomethylated 1.00000 4.1380e-45 hypomethylated 1.0000000 2.3410e-10 hypomethylated 1 4.6820e-08 hypomethylated -0.8442055 2.4668e-06 hypomethylated 0.0006167 hypomethylated chr13 20184350 20185350 43226 ENSG00000203614 0.339313 734 23 0.280693 701 23 0.294735 421 23 0.309447 456 23 0.317309 298 20 0.307993 1153 23 0.321838 354 22 0.327299 329 23 0.247057 444 22 0.354000 397 18 0.352326 705 23 0.351020 343 20 0.267092 345 19 0.356136 186 12 0.339694 391 23 0.343242 193 17 0.253818 1023 18 0.321602 671 23 0.296614 595 21 0.31435 853 23 0.42884 91 8 0.30072 264 17 0.316313 441 23 0.312928 221 17 0.349719 475 21 0.302184 773 23 0.292320 311 21 0.226189 169 11 0.292447 500 19 0.27507 844 23 0.316681 876 23 0.336640 952 23 0.135244 294 19 0.171709 344 19 0.3425134 292 10 0.2466507 257 15 0.125342 277 18 0.222969 750 23 0.322760 722 23 0.294880 565 23 0.27721 643 23 0.324558 671 23 0.300587 685 23 0.538767 0.488987 0.477580 0.516097 0.469386 0.523073 0.563342 0.540264 0.447000 0.544995 0.511954 0.517910 0.52033 0.458567 0.503870 0.487944 0.500749 0.539560 0.516961 0.536472 0.571587 0.505063 0.509797 0.528370 0.587480 0.518531 0.498892 0.427620 0.521251 0.507974 0.550069 0.546758 0.2631045 0.3088708 0.4087978 0.4573754 0.297833 0.4403094 0.537942 0.520552 0.525397 0.537272 0.51435 8 0.472149 0.463411 -0.01200638 23 0.276903 0.280210 -0.00330743 0.846152 0.80730721 insignificant 1 1.00000 insignificant 0.694645 0.96973060 insignificant 1 1.00000 insignificant 0.0022746 0.8867049 insignificant 1 insignificant 0.472372 0.3220416 0.157656 23 0.286792 0.1600881 0.1267041 4.6839e-18 1.0000e+00 weaklyHypermeth 1.5613e-16 1.0000e+00 weaklyHypermeth 3.8108e-10 1.0000e+00 weaklyHypermeth 2.1171e-08 1.00000000 weaklyHypermeth 0.1073741 2.2315e-02 weaklyHypermeth 4.1544e-01 insignificant 0.472843 0.380706 -0.0085117 23 0.305207 0.288918 0.0162889 1.0155e-01 2.1511e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 4.2246e-01 3.8805e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 0.0107790 3.7309e-01 insignificant 1.00000000 insignificant 0.463489 0.3220416 0.1725734 23 0.290218 0.1600881 0.1301296 7.2770e-18 1.0000e+00 weaklyHypermeth 2.6952e-16 1.00000000 weaklyHypermeth 1.1107e-07 1.00000000 weaklyHypermeth 4.6281e-06 1.00000 weaklyHypermeth 0.1050994 2.3299e-02 weaklyHypermeth 4.4805e-01 insignificant 0.463802 0.380706 0.01022893 23 0.325044 0.288918 0.0361256 1.8272e-02 7.9370e-03 weaklyHypermeth 5.3740e-01 1.0000e+00 insignificant 5.9873e-01 5.2052e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00850438 6.1369e-01 insignificant 1.000000 insignificant 0.3229167 0.380706 -0.1663233 23 0.1792987 0.288918 -0.1096196 0.9996618 7.9671e-14 weaklyHypometh 1.00000 4.4262e-12 weaklyHypometh 0.9999957 4.7273e-09 weaklyHypometh 1 5.9091e-07 weaklyHypometh -0.0965950 3.2778e-02 weaklyHypometh 0.5528193 insignificant chr13 20541950 20542950 43232 LATS2 ENSG00000150457 0.841760 229 8 0.667206 146 8 0.609728 76 8 0.718479 196 8 0.790670 175 8 0.659654 138 7 0.599775 168 8 0.560973 111 8 0.727160 70 8 0.724982 82 8 0.727300 149 9 0.599758 84 5 0.681887 164 8 0.863617 107 5 0.739753 111 8 0.601061 81 5 0.480000 66 2 0.678286 251 9 0.625974 49 6 0.44610 108 7 0.68000 34 2 0.67333 65 5 0.626917 188 8 0.782867 55 3 0.749414 109 8 0.534010 128 7 0.877083 43 6 0.662963 20 1 0.652919 183 8 0.61768 103 7 0.613218 110 6 0.754999 159 6 0.722801 136 8 0.636111 81 8 0.6417525 84 7 0.5714286 13 0 0.762952 119 8 0.339803 87 6 0.745440 150 9 0.720670 107 8 0.61113 170 8 0.709175 168 8 0.707965 150 8 0.782165 0.649682 0.614901 0.792926 0.777911 0.743625 0.653466 0.757966 0.763355 0.648289 0.762370 0.655268 0.79964 0.841403 0.815620 0.735679 0.412392 0.824594 0.738102 0.666818 0.744391 0.788459 0.620133 0.864510 0.706601 0.630347 0.856250 0.667949 0.730515 0.700510 0.655187 0.662350 0.6784895 0.6712740 0.5886760 0.6983124 0.734669 0.4645911 0.778120 0.768589 0.763235 0.768320 0.76831 0 0.763374 0.730159 0.00440992 8 0.691717 0.708341 -0.01662438 0.933000 0.72833783 insignificant 1 1.00000 insignificant 0.987774 0.35491892 insignificant 1 1.00000 insignificant -0.0182434 0.6137732 insignificant 1 insignificant 0.764498 0.6653846 0.088344 8 0.682565 0.6091939 0.0733715 4.1924e-05 9.9985e-01 weaklyHypermeth 6.0760e-04 1.0000e+00 weaklyHypermeth 2.3428e-03 9.9098e-01 weaklyHypermeth 3.8479e-02 1.00000000 weaklyHypermeth 0.0547318 4.3373e-01 insignificant 1.0000e+00 insignificant 0.763096 0.774497 -0.0227784 8 0.635666 0.666794 -0.0311284 7.0605e-01 1.6800e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.9719e-01 3.5629e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0316706 3.5529e-01 insignificant 1.00000000 insignificant 0.732489 0.6653846 0.0834079 8 0.695844 0.6091939 0.0866499 2.2510e-04 9.9975e-01 weaklyHypermeth 3.4631e-03 1.00000000 weaklyHypermeth 2.0219e-03 0.99898692 weaklyHypermeth 3.8148e-02 1.00000 weaklyHypermeth 0.0729752 3.1030e-01 insignificant 1.0000e+00 insignificant 0.729254 0.774497 -0.02885621 8 0.655313 0.666794 -0.0114814 4.9226e-01 2.8676e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.6267e-01 4.9888e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01342717 7.0807e-01 insignificant 1.000000 insignificant 0.6653846 0.774194 -0.1114582 8 0.6091939 0.633473 -0.0242794 0.9995733 3.1303e-04 weaklyHypometh 1.00000 5.7968e-03 weaklyHypometh 0.9983395 3.2079e-03 weaklyHypometh 1 6.8253e-02 weaklyHypometh -0.0864023 2.3166e-01 insignificant 1.0000000 insignificant chr13 22397150 22398150 43242 ENSG00000220711 0.764267 319 5 0.607210 145 5 0.722747 83 5 0.769003 330 5 0.614343 51 5 0.888090 423 5 0.701288 79 5 0.731624 130 5 0.711741 127 5 0.833370 90 5 0.792309 230 5 0.543421 56 5 0.972468 176 5 0.782857 77 5 0.836578 124 5 0.700000 31 5 0.435238 48 5 0.670700 401 5 0.823947 101 5 0.85953 238 5 0.90550 76 5 0.63946 130 5 0.776547 204 5 0.550714 109 5 0.917576 76 5 0.936781 190 5 0.838077 97 5 0.679082 35 3 0.777588 156 5 0.94478 159 5 0.888387 166 5 0.698935 277 5 0.820889 142 5 0.912698 110 5 1.0000000 82 1 0.5745055 60 5 0.840536 152 5 0.666279 233 5 0.795733 352 5 0.846742 247 5 0.80401 438 5 0.826172 276 5 0.804442 267 5 0.783463 0.734578 0.753044 0.775545 0.647726 0.878375 0.795603 0.890111 0.731379 0.839940 0.808671 0.610297 0.96877 0.804880 0.836402 0.711203 0.435586 0.691153 0.827875 0.861164 0.897396 0.666731 0.777307 0.571340 0.924733 0.931470 0.847787 0.750978 0.797924 0.948684 0.908776 0.724414 0.8024382 0.9305144 NA 0.5590534 0.824812 0.8679499 0.788738 0.842084 0.809639 0.851176 0.82261 5 0.787228 0.798088 -0.00752643 5 0.708266 0.657148 0.05111796 0.674862 0.65927185 insignificant 1 1.00000 insignificant 0.933046 0.11066637 insignificant 1 1.00000 insignificant -0.0580824 0.2281505 lowCoverage 1 lowCoverage 0.787228 0.8459564 -0.036268 5 0.708266 0.7738088 -0.0655431 5.8164e-01 1.2390e-02 weaklyHypometh 1.0000e+00 9.5309e-01 insignificant 9.6388e-01 4.4236e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant -0.0644482 3.8751e-01 lowCoverage 1.0000e+00 lowCoverage 0.787646 0.812658 -0.0232480 5 0.783252 0.812288 -0.0290356 9.2017e-01 1.3141e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7409e-01 7.4380e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0773838 1.5138e-02 weaklyHypometh 0.65815339 insignificant 0.798088 0.8459564 -0.0274050 5 0.657148 0.7738088 -0.1166610 6.3837e-01 1.5010e-01 insignificant 1.0000e+00 1.00000000 insignificant 8.6088e-01 0.30242176 insignificant 1.0000e+00 1.00000 insignificant -0.0063659 9.3378e-01 lowCoverage 1.0000e+00 lowCoverage 0.798565 0.812658 -0.01497125 5 0.788577 0.812288 -0.0237105 8.3615e-01 2.6869e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.7409e-01 5.6203e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01930144 6.2787e-01 lowCoverage 1.000000 lowCoverage 0.8466495 0.812658 0.0183960 5 0.7952373 0.812288 -0.0170506 0.1952441 4.6835e-01 insignificant 1.00000 1.0000e+00 insignificant 0.3687649 8.6555e-01 insignificant 1 1.0000e+00 insignificant -0.0129356 8.4939e-01 lowCoverage 1.0000000 lowCoverage chr13 24485950 24486950 43274 ENSG00000217654 0.752150 225 7 0.774686 163 7 0.590916 135 7 0.756367 179 6 0.857143 30 4 0.631357 201 7 0.544017 47 4 0.728261 62 4 0.688889 37 4 0.627029 48 4 0.770881 165 4 0.500000 19 3 0.738889 44 4 0.831111 32 3 0.738095 38 4 0.489583 19 0 0.616667 19 3 0.717763 176 7 0.692888 53 4 0.77815 184 7 0.83654 19 1 0.78299 38 4 0.714533 116 6 0.773148 42 4 0.771212 29 4 0.630655 226 7 0.905983 47 4 0.666667 13 1 0.927593 47 4 0.76080 207 7 0.730065 163 7 0.647493 248 7 0.757852 175 7 0.577273 26 4 0.7979403 134 7 0.5000000 15 0 0.752597 33 4 0.668739 177 7 0.803193 174 6 0.832446 233 6 0.76980 167 7 0.807814 145 6 0.677239 178 6 0.754435 0.647375 0.613567 0.746313 0.761905 0.820460 0.688195 0.730464 0.611708 0.758076 0.773065 0.505376 0.79600 0.792115 0.858679 0.611111 0.632616 0.641069 0.705367 0.721777 0.829198 0.869790 0.695265 0.780765 0.774194 0.722346 0.855804 0.600358 0.903873 0.720557 0.738812 0.834107 0.8079877 0.5741935 0.7075929 0.6290323 0.626344 0.6979166 0.775538 0.768290 0.752792 0.747334 0.70061 0 0.750533 0.779916 -0.02507495 6 0.684430 0.796383 -0.11195281 0.981175 0.19118828 insignificant 1 1.00000 insignificant 0.977271 0.19890549 insignificant 1 1.00000 insignificant -0.0710647 0.0574468 lowCoverage 1 lowCoverage 0.750533 0.7303571 0.026291 6 0.684430 0.7581434 -0.0737134 5.0201e-01 6.7048e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.7616e-01 8.4129e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0155086 7.7784e-01 lowCoverage 1.0000e+00 lowCoverage 0.750533 0.814939 -0.0439562 6 0.684430 0.828026 -0.1435956 9.9150e-01 5.3637e-03 weaklyHypometh 1.0000e+00 5.3637e-01 insignificant 9.9755e-01 5.2310e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0868553 3.3612e-02 lowCoverage 1.00000000 lowCoverage 0.779916 0.7303571 0.0514309 7 0.796383 0.7581434 0.0382394 3.0673e-01 9.9934e-01 insignificant 1.0000e+00 1.00000000 insignificant 1.8826e-01 0.99871351 insignificant 1.0000e+00 1.00000 insignificant 0.0865733 1.5155e-01 lowCoverage 1.0000e+00 lowCoverage 0.779916 0.814939 -0.01930111 6 0.796383 0.828026 -0.0316428 9.8718e-01 9.1644e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9248e-01 2.5764e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01579061 6.8796e-01 lowCoverage 1.000000 lowCoverage 0.7303571 0.814939 -0.0792777 6 0.7581434 0.828026 -0.0698822 0.9999764 4.1966e-03 weaklyHypometh 1.00000 6.5768e-02 weaklyHypometh 0.9999996 2.8382e-02 weaklyHypometh 1 4.0546e-01 insignificant -0.1023639 1.0022e-01 lowCoverage 1.0000000 lowCoverage chr13 26455050 26456050 43292 ENSG00000218572 0.690424 65 5 0.743681 81 5 0.697570 110 5 0.751684 42 2 0.823865 89 5 0.918403 47 4 0.816941 103 5 0.670861 108 5 0.822078 61 5 0.763946 43 5 0.867912 171 5 0.614487 90 5 0.666759 110 5 NA 0 0 0.863016 111 5 0.589808 67 5 0.663278 77 5 0.769728 38 3 0.949328 46 5 0.87167 38 5 0.87668 44 5 NA 0 0 0.802814 82 5 0.815152 32 2 0.500000 2 0 0.889917 109 5 0.766971 62 6 0.792121 31 4 0.825519 67 5 0.86393 86 5 0.886594 71 5 0.847965 128 7 0.081818 143 5 0.202543 122 5 0.5000000 11 0 0.0000000 25 1 0.125286 75 7 0.076496 139 5 0.907895 55 3 0.689133 92 5 0.56061 41 1 0.325000 27 3 0.724411 59 3 0.755453 0.594958 0.565296 0.686527 0.749787 0.926051 0.787558 0.599259 0.739476 0.620721 0.809081 0.587369 0.55337 NA 0.826877 0.470952 0.724248 0.719820 0.913375 0.943919 0.878626 NA 0.758968 0.818387 NA 0.807946 0.813402 0.810565 0.661885 0.844251 0.734064 0.843156 0.0070025 0.0211977 NA 0.0060407 0.013586 0.0378263 0.843350 0.460626 0.622441 0.145270 0.60577 0 0.744823 0.823529 -0.07716386 5 0.791216 0.849575 -0.05835811 0.947027 0.00662703 weaklyHypometh 1 0.83417 insignificant 0.976443 0.07848651 insignificant 1 1.00000 insignificant -0.0400752 0.3350475 lowCoverage 1 lowCoverage 0.744823 0.0797665 0.681139 5 0.791216 0.1709126 0.6203039 2.1259e-42 1.0000e+00 hypermethylated 1.9326e-40 1.0000e+00 hypermethylated 6.0621e-13 1.0000e+00 hypermethylated 5.5110e-11 1.00000000 hypermethylated 0.6017184 1.9965e-04 lowCoverage 7.6787e-03 lowCoverage 0.744823 0.619048 0.1160021 3 0.791216 0.718425 0.0727910 5.7250e-03 9.9630e-01 lowCoverage 2.3854e-01 1.0000e+00 lowCoverage 8.5060e-02 9.9792e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.1246666 2.7153e-01 lowCoverage 1.00000000 lowCoverage 0.823529 0.0797665 0.7434911 5 0.849575 0.1709126 0.6786620 1.0791e-41 1.0000e+00 hypermethylated 1.0791e-39 1.00000000 hypermethylated 7.7403e-11 1.00000000 hypermethylated 7.0367e-09 1.00000 hypermethylated 0.6417936 7.7765e-05 lowCoverage 3.7031e-03 lowCoverage 0.823529 0.619048 0.19367597 3 0.849575 0.718425 0.1311491 7.4088e-06 9.9597e-01 lowCoverage 5.6991e-04 1.0000e+00 lowCoverage 7.2408e-03 9.9663e-01 lowCoverage 3.6204e-01 1.0000e+00 lowCoverage 0.16474177 1.6810e-01 lowCoverage 1.000000 lowCoverage 0.0797665 0.619048 -0.5540825 3 0.1709126 0.718425 -0.5475129 1.0000000 2.3721e-11 lowCoverage 1.00000 1.0313e-09 lowCoverage 1.0000000 3.8370e-05 lowCoverage 1 1.5917e-03 lowCoverage -0.4770518 4.4669e-03 lowCoverage 0.1175487 lowCoverage chr13 26455150 26456150 43293 ENSG00000218572 0.690424 65 5 0.743681 81 5 0.697570 110 5 0.751684 42 2 0.823865 89 5 0.918403 47 4 0.816941 103 5 0.670861 108 5 0.822078 61 5 0.763946 43 5 0.867912 171 5 0.614487 90 5 0.666759 110 5 NA 0 0 0.863016 111 5 0.589808 67 5 0.663278 77 5 0.769728 38 3 0.949328 46 5 0.87167 38 5 0.87668 44 5 NA 0 0 0.802814 82 5 0.815152 32 2 0.500000 2 0 0.889917 109 5 0.766971 62 6 0.792121 31 4 0.825519 67 5 0.86393 86 5 0.886594 71 5 0.847965 128 7 0.081818 143 5 0.202543 122 5 0.5000000 11 0 0.0000000 25 1 0.125286 75 7 0.076496 139 5 0.907895 55 3 0.689133 92 5 0.56061 41 1 0.325000 27 3 0.724411 59 3 0.755453 0.594958 0.565296 0.686527 0.749787 0.926051 0.787558 0.599259 0.739476 0.620721 0.809081 0.587369 0.55337 NA 0.826877 0.470952 0.724248 0.719820 0.913375 0.943919 0.878626 NA 0.758968 0.818387 NA 0.807946 0.813402 0.810565 0.661885 0.844251 0.734064 0.843156 0.0070025 0.0211977 NA 0.0060407 0.013586 0.0378263 0.843350 0.460626 0.622441 0.145270 0.60577 0 0.744823 0.823529 -0.07716386 5 0.791216 0.849575 -0.05835811 0.947027 0.00662703 weaklyHypometh 1 0.83417 insignificant 0.976443 0.07848651 insignificant 1 1.00000 insignificant -0.0400752 0.3350475 lowCoverage 1 lowCoverage 0.744823 0.0797665 0.681139 5 0.791216 0.1709126 0.6203039 2.1259e-42 1.0000e+00 hypermethylated 1.9326e-40 1.0000e+00 hypermethylated 6.0621e-13 1.0000e+00 hypermethylated 5.5110e-11 1.00000000 hypermethylated 0.6017184 1.9965e-04 lowCoverage 7.6787e-03 lowCoverage 0.744823 0.619048 0.1160021 3 0.791216 0.718425 0.0727910 5.7250e-03 9.9630e-01 lowCoverage 2.3854e-01 1.0000e+00 lowCoverage 8.5060e-02 9.9792e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.1246666 2.7153e-01 lowCoverage 1.00000000 lowCoverage 0.823529 0.0797665 0.7434911 5 0.849575 0.1709126 0.6786620 1.0791e-41 1.0000e+00 hypermethylated 1.0791e-39 1.00000000 hypermethylated 7.7403e-11 1.00000000 hypermethylated 7.0367e-09 1.00000 hypermethylated 0.6417936 7.7765e-05 lowCoverage 3.7031e-03 lowCoverage 0.823529 0.619048 0.19367597 3 0.849575 0.718425 0.1311491 7.4088e-06 9.9597e-01 lowCoverage 5.6991e-04 1.0000e+00 lowCoverage 7.2408e-03 9.9663e-01 lowCoverage 3.6204e-01 1.0000e+00 lowCoverage 0.16474177 1.6810e-01 lowCoverage 1.000000 lowCoverage 0.0797665 0.619048 -0.5540825 3 0.1709126 0.718425 -0.5475129 1.0000000 2.3721e-11 lowCoverage 1.00000 1.0313e-09 lowCoverage 1.0000000 3.8370e-05 lowCoverage 1 1.5917e-03 lowCoverage -0.4770518 4.4669e-03 lowCoverage 0.1175487 lowCoverage chr13 26597550 26598550 43304 USP12 ENSG00000152484 0.800065 310 10 0.847317 304 8 0.765589 258 10 0.905413 321 10 0.828625 178 10 0.937369 394 10 0.861725 250 10 0.887220 331 11 0.851381 241 11 0.868879 164 10 0.883655 442 10 0.867431 144 10 0.811646 259 10 0.956502 149 10 0.913063 357 10 0.957895 144 9 0.354167 20 1 0.891582 311 10 0.837466 354 10 0.94682 330 10 0.84727 104 8 0.78270 134 10 0.823776 168 11 0.830401 145 10 0.887937 63 8 0.910022 369 10 0.899631 258 10 0.819739 128 9 0.955793 287 10 0.94483 386 10 0.915760 365 10 0.892777 405 10 0.957659 331 10 0.899147 224 8 0.8718169 282 10 0.8333333 13 0 0.819702 285 11 0.850809 419 10 0.877159 436 10 0.841123 276 10 0.84917 239 10 0.843161 248 10 0.914016 248 10 0.862576 0.864461 0.792831 0.916685 0.872931 0.930211 0.874699 0.903788 0.885807 0.871760 0.898056 0.873149 0.85155 0.949434 0.935444 0.976201 0.569957 0.946124 0.927676 0.951458 0.855707 0.870603 0.822098 0.904889 0.895511 0.938257 0.881728 0.855351 0.946458 0.943819 0.928167 0.913873 0.9711546 0.9201301 0.9320584 0.9418713 0.871283 0.8894337 0.912790 0.908431 0.861864 0.893176 0.93016 9 0.896788 0.907539 -0.00871248 10 0.870095 0.882172 -0.01207741 0.916255 0.16843419 insignificant 1 1.00000 insignificant 0.689068 0.06542478 insignificant 1 1.00000 insignificant -0.0271962 0.4105850 insignificant 1 insignificant 0.896788 0.9144144 -0.012524 10 0.870095 0.8588131 0.0112816 2.1244e-01 5.1350e-03 weaklyHypometh 1.0000e+00 5.4723e-01 insignificant 8.2650e-01 9.7764e-06 weaklyHypometh 1.0000e+00 0.00488822 weaklyHypometh -0.0233876 5.1359e-01 insignificant 1.0000e+00 insignificant 0.896788 0.899102 -0.0011920 10 0.870095 0.869092 0.0010027 4.9089e-01 2.4089e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.1777e-01 2.9673e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0162355 6.1383e-01 insignificant 1.00000000 insignificant 0.907539 0.9144144 -0.0040917 10 0.882172 0.8588131 0.0233590 1.4003e-01 4.5662e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant 6.8519e-01 0.00107576 weaklyHypometh 1.0000e+00 0.53788 insignificant 0.0038086 8.8574e-01 insignificant 1.0000e+00 insignificant 0.907539 0.899102 0.00514320 10 0.882172 0.869092 0.0130801 2.0452e-01 5.6661e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.7037e-01 4.6658e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01096069 6.0900e-01 insignificant 1.000000 insignificant 0.9144144 0.899102 0.0080250 10 0.8588131 0.869092 -0.0102789 0.0042705 8.0710e-01 weaklyHypermeth 0.85410 1.0000e+00 insignificant 0.0028196 9.9035e-01 weaklyHypermeth 1 1.0000e+00 insignificant 0.0071521 7.8047e-01 insignificant 1.0000000 insignificant chr13 28055450 28056450 43337 FLT1 ENSG00000102755 0.699975 360 7 0.673973 397 8 0.589898 159 8 0.660418 337 6 0.798177 134 5 0.768654 307 6 0.798459 239 8 0.709785 179 8 0.719479 136 8 0.755294 103 8 0.749455 324 8 0.717761 123 4 0.570724 112 5 0.757576 35 2 0.773952 107 4 0.783510 109 5 0.844055 77 3 0.600844 413 4 0.770600 243 5 0.73823 281 8 0.70212 112 8 0.79167 27 3 0.730285 137 8 0.636435 138 8 0.692674 131 6 0.778322 293 8 0.750804 109 8 0.640257 101 7 0.527692 137 5 0.77877 283 8 0.757613 289 8 0.724508 266 8 0.096122 240 8 0.215545 188 8 0.1340659 158 8 0.1093750 49 3 0.148474 196 8 0.119880 258 8 0.731645 381 6 0.557575 254 7 0.68834 424 6 0.649579 155 3 0.575409 309 6 0.736803 0.659655 0.640277 0.776400 0.774745 0.776550 0.742179 0.711313 0.692758 0.738355 0.787796 0.698880 0.55656 0.732256 0.776799 0.866636 0.698189 0.607194 0.771947 0.808735 0.725124 0.797678 0.776562 0.692174 0.817245 0.812509 0.653964 0.637408 0.722251 0.761168 0.715411 0.759334 0.0677880 0.1838549 0.0261592 0.0752033 0.115913 0.0797622 0.689097 0.659603 0.738365 0.608235 0.70180 3 0.765340 0.772817 -0.01923453 8 0.736135 0.778660 -0.04252558 0.890730 0.39832224 insignificant 1 1.00000 insignificant 0.910358 0.75314294 insignificant 1 1.00000 insignificant 0.0147787 0.5968342 insignificant 1 insignificant 0.765201 0.1065197 0.658780 8 0.720518 0.1285602 0.5919582 3.2456e-66 1.0000e+00 hypermethylated 1.0819e-63 1.0000e+00 hypermethylated 1.2446e-18 1.0000e+00 hypermethylated 6.2231e-16 1.00000000 hypermethylated 0.5867970 1.9721e-13 hypermethylated 2.4652e-11 hypermethylated 0.765115 0.740643 0.0273755 6 0.709748 0.599310 0.1104383 3.5064e-04 9.7262e-01 weaklyHypermeth 1.9480e-02 1.0000e+00 weaklyHypermeth 1.6221e-01 9.9285e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0835306 6.3022e-02 insignificant 1.00000000 insignificant 0.772524 0.1065197 0.6738581 8 0.737324 0.1285602 0.6087642 1.6555e-49 1.0000e+00 hypermethylated 2.0694e-47 1.00000000 hypermethylated 3.9262e-14 1.00000000 hypermethylated 6.5437e-12 1.00000 hypermethylated 0.5720182 1.1047e-12 hypermethylated 2.2095e-10 hypermethylated 0.772592 0.740643 0.05402458 6 0.756526 0.599310 0.1572165 5.5887e-03 9.9822e-01 weaklyHypermeth 1.9271e-01 1.0000e+00 insignificant 5.3509e-02 9.9285e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.06875188 1.2263e-01 insignificant 1.000000 insignificant 0.1065197 0.740960 -0.6262303 6 0.1285602 0.624137 -0.4955770 1.0000000 1.7621e-24 hypomethylated 1.00000 2.5173e-22 hypomethylated 1.0000000 1.2742e-07 hypomethylated 1 1.1583e-05 hypomethylated -0.5032664 8.5299e-06 hypomethylated 0.0013080 hypomethylated chr13 28090650 28091650 43342 ENSG00000216743 0.797990 376 7 0.858540 173 7 0.882969 192 7 0.895558 381 7 0.826605 103 7 0.850082 424 7 0.820237 156 7 0.848512 206 7 0.856035 205 7 0.894877 260 7 0.839081 191 7 0.851670 198 7 0.857084 255 7 0.883476 149 7 0.828696 237 7 0.893760 160 7 0.892857 37 3 0.865534 359 7 0.907762 148 7 0.83961 365 7 0.62438 59 7 0.82586 180 7 0.708302 176 7 0.666667 98 7 0.897682 116 7 0.889852 183 7 0.741268 130 6 0.849573 114 7 0.842889 107 7 0.88377 200 7 0.866659 180 7 0.837806 325 7 0.670888 145 7 0.722561 149 7 0.8571429 265 7 0.7193878 58 3 0.607980 108 7 0.760204 168 7 0.855882 334 7 0.898923 232 7 0.89728 298 7 0.889049 251 7 0.922384 293 7 0.802916 0.808840 0.859630 0.878996 0.849157 0.874310 0.845329 0.852579 0.830285 0.853424 0.812545 0.802796 0.86011 0.878097 0.797378 0.835638 0.835094 0.842447 0.898840 0.819363 0.846661 0.804803 0.816750 0.756402 0.894011 0.859199 0.763986 0.774594 0.823215 0.883454 0.897316 0.790911 0.6000316 0.7052974 0.7981221 0.6083166 0.626266 0.7052283 0.865396 0.866010 0.859741 0.889874 0.91447 7 0.843060 0.819058 0.02233796 7 0.882788 0.767319 0.11546884 0.071639 0.99269029 insignificant 1 1.00000 insignificant 0.111085 0.98325328 insignificant 1 1.00000 insignificant 0.0566539 0.0631860 insignificant 1 insignificant 0.842991 0.7469205 0.099345 7 0.868137 0.6740121 0.1941248 2.8566e-06 3.8961e-02 weaklyHypermeth 4.7610e-05 1.0000e+00 weaklyHypermeth 9.2116e-05 4.0223e-01 weaklyHypermeth 2.2467e-03 1.00000000 weaklyHypermeth 0.1365194 9.8332e-03 weaklyHypermeth 2.1852e-01 insignificant 0.842820 0.871449 -0.0302926 7 0.849299 0.882473 -0.0331739 9.8309e-01 2.7714e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.8795e-01 2.6458e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0331574 3.2505e-02 weaklyHypometh 1.00000000 insignificant 0.819796 0.7469205 0.0855141 7 0.779901 0.6740121 0.1058890 1.8785e-03 4.6692e-02 weaklyHypermeth 2.4396e-02 1.00000000 weaklyHypermeth 2.0467e-02 0.43455727 weaklyHypermeth 2.7115e-01 1.00000 insignificant 0.0798654 9.4065e-02 insignificant 1.0000e+00 insignificant 0.821970 0.871449 -0.05304566 7 0.826380 0.882473 -0.0560927 9.9782e-01 3.2870e-03 weaklyHypometh 1.0000e+00 8.2174e-01 insignificant 9.8790e-01 1.8266e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.08981136 8.0030e-03 weaklyHypometh 0.682306 insignificant 0.7477578 0.871449 -0.1311198 7 0.7702995 0.882473 -0.1121737 0.7527661 8.3422e-03 weaklyHypometh 1.00000 1.1428e-01 insignificant 0.8290022 5.5307e-03 weaklyHypometh 1 9.7030e-02 weaklyHypometh -0.1696768 3.3275e-03 weaklyHypometh 0.1008335 insignificant chr13 29042550 29043550 43361 ENSG00000179141 0.828213 142 5 0.654545 55 3 0.762963 58 2 0.749356 89 5 0.833333 17 2 0.752426 201 5 0.371429 33 2 0.775735 36 2 0.924837 36 2 0.600000 37 2 0.772711 37 2 0.760000 24 2 0.808333 58 2 NA 0 0 0.727273 46 2 0.950000 21 2 0.958333 24 2 0.809849 119 5 0.800000 70 5 0.74421 147 5 0.56842 44 2 0.70826 50 2 0.744000 65 5 0.777778 29 2 0.916667 36 2 0.779022 116 5 0.731379 56 2 1.000000 22 2 0.784333 59 2 0.74965 148 5 0.746894 128 5 0.819287 168 5 0.592308 65 2 0.900000 30 2 0.7467532 158 5 0.8214286 25 2 0.781818 45 2 0.774194 143 5 0.841111 102 2 0.783485 153 5 0.81686 144 5 0.852764 132 5 0.850000 134 2 0.920467 0.786231 0.907228 0.956588 0.750000 0.923501 0.927878 0.939356 0.886731 1.000000 0.889790 0.900000 0.97896 NA 0.954987 0.949515 0.958738 0.893425 1.000000 0.888889 0.920797 0.916556 0.960000 1.000000 0.915858 0.881135 0.962785 1.000000 0.918786 0.970303 0.959175 0.946180 0.9809559 1.0000000 1.0000000 0.9278779 0.954987 1.0000000 0.977994 0.903883 0.931034 0.931585 1.00000 2 0.845600 0.836048 -0.01431381 5 0.762714 0.767272 -0.00455825 0.866200 0.29280695 insignificant 1 1.00000 insignificant 0.744235 0.31869443 insignificant 1 1.00000 insignificant -0.0095861 0.8248372 lowCoverage 1 lowCoverage 0.845600 0.8347639 -0.032017 5 0.762714 0.7605614 0.0021524 4.6573e-01 1.6742e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.1813e-01 5.6937e-02 insignificant 1.0000e+00 1.00000000 insignificant -0.0018617 9.7169e-01 lowCoverage 1.0000e+00 lowCoverage 0.845600 0.918797 -0.0443681 5 0.762714 0.825491 -0.0627776 9.8580e-01 2.6533e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.6083e-01 8.9457e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0612886 7.4119e-02 lowCoverage 1.00000000 lowCoverage 0.836048 0.8347639 -0.0111672 5 0.767272 0.7605614 0.0067107 3.8437e-01 9.9666e-02 insignificant 1.0000e+00 1.00000000 insignificant 9.4049e-01 0.11353267 insignificant 1.0000e+00 1.00000 insignificant 0.0077244 8.8395e-01 lowCoverage 1.0000e+00 lowCoverage 0.836048 0.918797 -0.02946869 5 0.767272 0.825491 -0.0582193 9.5692e-01 4.0334e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.4510e-01 6.2809e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.05170246 1.4275e-01 lowCoverage 1.000000 lowCoverage 0.8347639 0.918797 -0.0129725 5 0.7605614 0.825491 -0.0649300 0.2970201 3.1976e-02 weaklyHypometh 1.00000 3.7182e-01 insignificant 0.4591596 4.8422e-01 insignificant 1 1.0000e+00 insignificant -0.0594269 2.2163e-01 lowCoverage 1.0000000 lowCoverage chr13 29614650 29615650 43380 ENSG00000122043 0.823289 376 9 0.824958 301 8 0.637196 115 8 0.854505 301 8 0.822222 43 6 0.885913 390 8 0.673382 55 5 0.719381 227 8 0.767942 120 8 0.785036 144 8 0.902068 228 7 0.237500 38 4 0.871596 233 8 0.787276 126 8 0.709673 115 7 0.863261 43 4 0.500000 13 0 0.559749 421 8 0.836128 226 8 0.89239 321 7 0.88326 110 7 0.25790 124 5 0.711957 152 7 0.831439 67 6 0.709355 96 6 0.828408 386 9 0.777234 145 8 0.848148 45 5 0.878061 305 8 0.89884 327 8 0.901431 357 9 0.917523 377 9 0.061310 303 7 0.109324 233 7 0.0000000 555 8 0.2656250 79 5 0.087583 233 8 0.201852 531 9 0.664467 271 9 0.530732 284 9 0.59250 246 8 0.322385 531 8 0.523815 250 9 0.775987 0.813930 0.620565 0.851551 0.932735 0.852069 0.644034 0.897251 0.720440 0.883508 0.893185 0.286099 0.87293 0.774551 0.707653 0.828874 0.582062 0.462775 0.809635 0.904007 0.874000 0.462287 0.835680 0.807602 0.677124 0.806640 0.784668 0.806278 0.862987 0.882169 0.886554 0.903377 0.0497945 0.0955569 0.0000000 0.0728752 0.078656 0.0076820 0.561880 0.410521 0.491983 0.317639 0.43831 4 0.794056 0.841831 -0.04314217 8 0.692637 0.673500 0.01913641 0.969505 0.12143096 insignificant 1 1.00000 insignificant 0.979193 0.49082235 insignificant 1 1.00000 insignificant -0.0392898 0.5440971 insignificant 1 insignificant 0.794056 0.0542916 0.754584 8 0.692637 0.1454407 0.5471959 8.1424e-65 1.0000e+00 hypermethylated 2.0356e-62 1.0000e+00 hypermethylated 7.2789e-17 1.0000e+00 hypermethylated 1.4558e-14 1.00000000 hypermethylated 0.6267242 9.9359e-09 hypermethylated 9.0326e-07 hypermethylated 0.794832 0.475348 0.3447373 8 0.781164 0.556055 0.2251092 3.1073e-21 1.0000e+00 hypermethylated 1.5536e-18 1.0000e+00 hypermethylated 4.0563e-10 1.0000e+00 hypermethylated 2.0282e-07 1.0000e+00 hypermethylated 0.2208939 1.2167e-02 weaklyHypermeth 0.57940248 insignificant 0.841831 0.0542916 0.7917111 8 0.673500 0.1454407 0.5280595 5.8656e-57 9.9999e-01 hypermethylated 1.4664e-54 1.00000000 hypermethylated 6.0926e-15 0.99999868 hypermethylated 1.5231e-12 1.00000 hypermethylated 0.6660140 2.4399e-08 hypermethylated 2.4399e-06 hypermethylated 0.842507 0.475348 0.38370892 8 0.808200 0.556055 0.2521455 4.2881e-21 9.9993e-01 hypermethylated 2.1441e-18 1.0000e+00 hypermethylated 6.4674e-10 9.9999e-01 hypermethylated 3.2337e-07 1.0000e+00 hypermethylated 0.26018369 6.4944e-03 weaklyHypermeth 0.649438 insignificant 0.0545171 0.475348 -0.4124350 9 0.1745288 0.556055 -0.3815259 0.9991804 6.8442e-23 hypomethylated 1.00000 8.5553e-21 hypomethylated 0.9999724 1.8486e-10 hypomethylated 1 4.6820e-08 hypomethylated -0.4058303 5.1462e-04 hypomethylated 0.0253225 hypomethylated chr13 29880250 29881250 43391 KATNAL1 ENSG00000102781 0.095527 1864 38 0.089026 1153 36 0.096706 1319 39 0.096729 1321 38 0.108434 738 39 0.107399 2189 39 0.138903 1205 40 0.110464 1099 39 0.123439 1318 36 0.094108 1373 36 0.132363 1292 39 0.077274 1229 37 0.129544 1254 37 0.121804 480 19 0.099292 1689 37 0.091148 1029 38 0.082623 839 31 0.103216 1468 38 0.090683 987 37 0.14313 1772 38 0.13400 379 29 0.12687 1011 37 0.117766 1174 38 0.084080 736 37 0.130588 667 36 0.115183 1788 39 0.093536 996 34 0.093885 504 31 0.125803 837 36 0.09141 1728 39 0.122327 1630 38 0.092056 1979 39 0.028449 902 36 0.018622 901 37 0.0309170 901 29 0.1167335 556 35 0.105999 721 27 0.125049 1400 39 0.105806 2128 38 0.105985 2061 38 0.10107 1423 38 0.141056 1857 38 0.121062 1756 39 0.163874 0.131765 0.169962 0.172639 0.188363 0.170105 0.185459 0.162986 0.162103 0.179780 0.190111 0.107904 0.21162 0.141315 0.187982 0.139780 0.150604 0.175849 0.164568 0.214633 0.209145 0.188636 0.143322 0.143476 0.183911 0.199519 0.174975 0.145677 0.186212 0.165689 0.153336 0.153378 0.0399124 0.0226733 0.0298731 0.1974834 0.069414 0.2172905 0.191528 0.179544 0.177269 0.211560 0.16750 32 0.151885 0.153250 -0.00168881 38 0.098933 0.108470 -0.00953753 0.652586 0.59720968 insignificant 1 1.00000 insignificant 0.515597 0.81320726 insignificant 1 1.00000 insignificant -0.0040351 0.5559837 insignificant 1 insignificant 0.151951 0.0888311 0.084575 38 0.103430 0.0648010 0.0386286 9.5956e-08 8.9340e-01 weaklyHypermeth 1.8105e-06 1.0000e+00 weaklyHypermeth 2.2428e-03 9.9822e-01 weaklyHypermeth 3.8479e-02 1.00000000 weaklyHypermeth 0.0356292 1.4212e-01 insignificant 1.0000e+00 insignificant 0.151736 0.104173 -0.0129358 38 0.095272 0.125740 -0.0304674 6.5056e-01 4.2151e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.8413e-01 8.5116e-04 weaklyHypometh 1.0000e+00 2.1279e-01 insignificant -0.0084040 3.5467e-01 insignificant 1.00000000 insignificant 0.153267 0.0888311 0.0894513 38 0.107719 0.0648010 0.0429179 1.0253e-04 9.8894e-01 weaklyHypermeth 1.6275e-03 1.00000000 weaklyHypermeth 3.1732e-02 0.99231766 weaklyHypermeth 3.9176e-01 1.00000 insignificant 0.0396642 1.1055e-01 insignificant 1.0000e+00 insignificant 0.153513 0.104173 -0.01140178 38 0.116038 0.125740 -0.0097019 7.3991e-01 5.6582e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9032e-01 3.0633e-03 weaklyHypometh 1.0000e+00 8.4038e-01 insignificant -0.00436897 6.4055e-01 insignificant 1.000000 insignificant 0.0888599 0.104088 -0.1033353 38 0.0634450 0.107483 -0.0440382 0.9233355 1.8740e-04 weaklyHypometh 1.00000 3.6039e-03 weaklyHypometh 0.9998511 1.6118e-03 weaklyHypometh 1 3.9313e-02 weaklyHypometh -0.0440332 8.5837e-02 insignificant 1.0000000 insignificant chr13 29880350 29881350 43392 KATNAL1 ENSG00000102781 0.055624 1695 35 0.059579 902 33 0.060128 1153 36 0.052987 1207 35 0.058334 621 36 0.070741 1947 36 0.100673 1081 37 0.084661 967 36 0.093080 1155 33 0.057157 1139 33 0.097232 1036 36 0.060553 1063 34 0.082943 1129 34 0.067942 328 16 0.057927 1404 34 0.062309 875 35 0.052471 828 31 0.058636 1226 35 0.048706 708 34 0.10091 1598 35 0.08843 327 26 0.09719 891 34 0.095285 1032 35 0.053829 592 34 0.084696 619 33 0.067049 1483 36 0.060795 721 31 0.067498 434 28 0.087882 724 33 0.05133 1485 36 0.086234 1438 35 0.058548 1856 36 0.021963 736 33 0.017899 761 34 0.0341153 815 26 0.0609738 530 32 0.110192 516 24 0.072716 1179 36 0.061851 1939 35 0.069074 1893 35 0.05655 1267 35 0.088400 1752 35 0.086474 1646 36 0.086577 0.073616 0.099118 0.088708 0.084484 0.096936 0.100496 0.108287 0.097007 0.098766 0.115122 0.073449 0.11032 0.073733 0.103026 0.081107 0.095507 0.092079 0.083491 0.124880 0.116698 0.129122 0.097252 0.085021 0.090225 0.104038 0.107956 0.092754 0.104428 0.089294 0.075504 0.085409 0.0270140 0.0214212 0.0354571 0.0958091 0.072894 0.1163766 0.102603 0.107593 0.090765 0.102704 0.09568 29 0.084761 0.089036 -0.00311050 35 0.066224 0.076922 -0.01069777 0.629694 0.52448145 insignificant 1 1.00000 insignificant 0.548135 0.73385311 insignificant 1 1.00000 insignificant -0.0057674 0.3609010 insignificant 1 insignificant 0.084803 0.0575270 0.041915 35 0.069455 0.0506162 0.0188386 2.5747e-04 7.7993e-01 weaklyHypermeth 3.3009e-03 1.0000e+00 weaklyHypermeth 1.7430e-02 9.9289e-01 weaklyHypermeth 2.2934e-01 1.00000000 insignificant 0.0161534 3.2396e-01 insignificant 1.0000e+00 insignificant 0.084383 0.058609 -0.0053139 35 0.059836 0.087488 -0.0276513 5.0446e-01 1.0018e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6385e-01 2.5774e-03 weaklyHypometh 1.0000e+00 4.2957e-01 insignificant -0.0033399 6.6967e-01 insignificant 1.00000000 insignificant 0.089012 0.0575270 0.0476441 35 0.074577 0.0506162 0.0239606 9.3792e-03 9.6476e-01 weaklyHypermeth 1.0538e-01 1.00000000 insignificant 1.1030e-01 0.97614677 insignificant 1.0000e+00 1.00000 insignificant 0.0219208 1.9944e-01 insignificant 1.0000e+00 insignificant 0.089213 0.058609 -0.00137198 35 0.082691 0.087488 -0.0047964 6.0388e-01 1.3091e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7157e-01 1.1607e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 0.00242752 7.6976e-01 insignificant 1.000000 insignificant 0.0574713 0.058505 -0.0505527 35 0.0480333 0.065776 -0.0177432 0.8292002 4.2092e-03 weaklyHypometh 1.00000 6.5768e-02 weaklyHypometh 0.9992006 6.4220e-03 weaklyHypometh 1 1.1072e-01 insignificant -0.0194932 2.5879e-01 insignificant 1.0000000 insignificant chr13 29917350 29918350 43394 ENSG00000169697 0.078675 312 12 0.154530 304 9 0.118965 246 8 0.088567 250 7 0.044198 385 13 0.271207 448 8 0.068088 241 8 0.052780 349 8 0.047671 315 8 0.214262 277 7 0.167429 316 9 0.077282 246 8 0.092803 267 7 0.089560 205 7 0.053926 469 8 0.079365 296 8 0.020833 42 4 0.144770 251 7 0.110746 256 8 0.19806 338 7 0.13133 114 8 0.16402 165 7 0.273131 204 8 0.105079 171 8 0.011429 150 9 0.096467 533 14 0.050845 306 8 0.304000 201 6 0.183966 159 8 0.19181 455 8 0.153579 347 9 0.150081 379 9 0.262121 235 9 0.175000 103 8 0.0833333 356 12 0.0000000 31 3 0.243469 310 7 0.102409 327 8 0.125103 426 11 0.132977 235 7 0.12523 238 7 0.069697 175 6 0.129978 212 7 0.049539 0.030888 0.041971 0.032421 0.020305 0.047813 0.037565 0.030824 0.019509 0.031365 0.053097 0.040551 0.02952 0.033362 0.028127 0.018537 0.018098 0.049961 0.027727 0.028764 0.074857 0.014594 0.046263 0.050025 0.032047 0.040024 0.021463 0.013287 0.027218 0.023030 0.018632 0.047532 0.0906309 0.0778547 0.0262219 0.0235631 0.106752 0.0324262 0.042576 0.029284 0.042878 0.022491 0.03858 6 0.057477 0.081684 0.00060197 8 0.094839 0.099338 -0.00449936 0.511377 0.26696184 insignificant 1 1.00000 insignificant 0.858100 0.23282376 insignificant 1 1.00000 insignificant -0.0426251 0.1451684 insignificant 1 insignificant 0.057477 0.1130690 -0.042538 8 0.094839 0.1236884 -0.0288495 9.6913e-01 3.1912e-05 weaklyHypometh 1.0000e+00 7.9780e-03 weaklyHypometh 8.3615e-01 4.4970e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant -0.0357027 4.4360e-01 insignificant 1.0000e+00 insignificant 0.057477 0.084759 -0.0071008 7 0.094839 0.129142 -0.0343036 9.2282e-01 3.1069e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.5687e-01 7.3214e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0079116 6.7738e-01 insignificant 1.00000000 insignificant 0.081684 0.1130690 -0.0423582 8 0.099338 0.1236884 -0.0243502 8.5689e-01 2.4070e-03 weaklyHypometh 1.0000e+00 0.80232697 insignificant 4.5500e-01 0.07098659 insignificant 1.0000e+00 1.00000 insignificant 0.0069224 8.8800e-01 insignificant 1.0000e+00 insignificant 0.081684 0.084759 -0.01050744 7 0.099338 0.129142 -0.0298042 8.1345e-01 3.6079e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.3859e-01 8.2221e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03471349 2.1500e-01 insignificant 1.000000 insignificant 0.1130690 0.084759 0.0342027 9 0.1236884 0.129142 -0.0054540 0.2767822 9.5868e-01 insignificant 1.00000 1.0000e+00 insignificant 0.8476781 9.8278e-01 insignificant 1 1.0000e+00 insignificant 0.0277911 5.4161e-01 insignificant 1.0000000 insignificant chr13 30343850 30344850 43409 ALOX5AP ENSG00000132965 0.796778 448 9 0.664021 213 8 0.681020 154 9 0.792089 387 9 0.704233 107 8 0.822958 582 9 0.856826 200 8 0.772417 148 9 0.621114 168 9 0.857752 130 7 0.843023 319 9 0.692284 116 6 0.669489 143 9 0.811508 27 2 0.756646 145 6 0.678571 70 5 0.791478 99 6 0.686802 512 9 0.763086 258 9 0.75967 440 9 0.84893 125 9 0.42037 92 6 0.855531 194 9 0.824252 104 8 0.741816 91 9 0.784270 273 9 0.700382 132 9 0.764244 90 6 0.727790 188 9 0.74404 306 9 0.685603 318 9 0.760123 473 9 0.649695 198 9 0.722832 202 9 0.6189112 350 7 0.7035354 65 4 0.659392 297 9 0.751458 296 9 0.564698 333 9 0.613859 383 9 0.63675 364 9 0.592444 298 8 0.588913 347 9 0.831038 0.651038 0.769879 0.852659 0.778047 0.838114 0.833931 0.810780 0.693055 0.874032 0.854369 0.772957 0.72968 0.796129 0.820565 0.780103 0.824921 0.728083 0.768965 0.816701 0.908743 0.517942 0.897750 0.876206 0.742187 0.784235 0.717761 0.810474 0.774432 0.776178 0.754779 0.822582 0.6524129 0.6095387 0.6570707 0.7375055 0.697221 0.8000337 0.698714 0.713017 0.690069 0.707392 0.65442 6 0.783112 0.754401 0.00953164 9 0.764668 0.760289 0.00437914 0.507808 0.88384001 insignificant 1 1.00000 insignificant 0.566886 0.78538134 insignificant 1 1.00000 insignificant 0.0129766 0.7267000 insignificant 1 insignificant 0.783112 0.6221591 0.124111 9 0.764668 0.6905791 0.0740886 5.5232e-08 2.4441e-01 weaklyHypermeth 1.0622e-06 1.0000e+00 weaklyHypermeth 2.3472e-03 2.9070e-01 weaklyHypermeth 3.8479e-02 1.00000000 weaklyHypermeth 0.0667844 2.4339e-02 weaklyHypermeth 4.4252e-01 insignificant 0.783112 0.633623 0.1759187 9 0.764668 0.597197 0.1674705 7.6523e-14 9.9712e-01 weaklyHypermeth 1.9131e-11 1.0000e+00 weaklyHypermeth 1.2770e-06 9.9503e-01 weaklyHypermeth 2.1283e-04 1.0000e+00 weaklyHypermeth 0.1517550 5.0525e-07 weaklyHypermeth 0.00050525 weaklyHypermeth 0.754401 0.6221591 0.1228189 9 0.760289 0.6905791 0.0697094 1.4379e-05 3.4699e-01 weaklyHypermeth 2.4792e-04 1.00000000 weaklyHypermeth 1.3990e-02 0.40625177 weaklyHypermeth 2.0275e-01 1.00000 insignificant 0.0538079 1.8272e-01 insignificant 1.0000e+00 insignificant 0.754401 0.633623 0.17439084 9 0.760289 0.597197 0.1630914 2.9992e-10 9.9440e-01 weaklyHypermeth 5.9984e-08 1.0000e+00 weaklyHypermeth 2.1942e-05 9.9606e-01 weaklyHypermeth 5.4855e-03 1.0000e+00 weaklyHypermeth 0.13877843 1.4980e-03 weaklyHypermeth 0.227920 insignificant 0.6221591 0.633623 0.0591974 9 0.6905791 0.597197 0.0933819 0.0010565 4.4808e-01 weaklyHypermeth 0.52825 1.0000e+00 insignificant 0.0183264 8.0641e-01 weaklyHypermeth 1 1.0000e+00 insignificant 0.0849706 7.2831e-03 weaklyHypermeth 0.1693738 insignificant chr13 30450050 30451050 43412 C13orf26 ENSG00000175664 0.968511 94 6 0.924362 176 6 0.925837 76 6 0.983333 40 4 0.939815 36 4 1.000000 65 6 0.784392 36 4 0.936014 117 6 0.962963 37 4 0.961389 101 6 0.968654 229 6 1.000000 12 0 0.968835 152 6 NA 0 0 0.949975 108 6 0.888889 14 0 0.749916 44 4 0.987179 53 6 0.968841 95 5 0.92361 60 6 0.98039 69 6 0.75000 16 0 0.906603 115 6 0.958333 43 4 NA 0 0 0.962749 312 6 1.000000 51 4 1.000000 4 0 0.924625 203 6 0.96075 249 6 0.949437 258 6 0.928190 112 6 0.837636 191 6 0.876970 167 6 0.8837457 124 6 0.8750000 8 0 0.972222 45 5 0.918515 259 6 1.000000 62 6 0.946781 115 6 0.98718 51 6 0.972222 27 2 0.833333 27 4 0.964731 0.901602 0.906607 0.971154 0.939103 1.000000 0.821886 0.923010 0.935897 0.960417 0.960930 1.000000 0.95760 NA 0.944598 0.865385 0.757867 0.977811 0.963378 0.926442 0.966063 0.740385 0.885828 0.975962 NA 0.960153 1.000000 0.982955 0.924245 0.953401 0.948949 0.927740 0.8314788 0.8388136 0.8844550 0.9231349 0.951923 0.9130491 1.000000 0.944154 0.977811 0.951923 0.90385 0 0.938511 0.946927 -0.00833105 6 0.943674 0.948216 -0.00454155 0.683518 0.42422502 insignificant 1 1.00000 insignificant 0.329141 0.58054233 insignificant 1 1.00000 insignificant -0.0018317 0.9440934 lowCoverage 1 lowCoverage 0.938511 0.8828715 0.054674 6 0.943674 0.8897516 0.0539223 1.5770e-04 9.9723e-01 weaklyHypermeth 2.1902e-03 1.0000e+00 weaklyHypermeth 7.8320e-03 9.9270e-01 weaklyHypermeth 1.1351e-01 1.00000000 insignificant 0.0424335 1.0481e-01 lowCoverage 1.0000e+00 lowCoverage 0.938511 0.968085 -0.0292476 6 0.943674 0.969415 -0.0257406 9.6105e-01 5.2097e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7781e-01 1.1640e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0114550 7.4449e-01 lowCoverage 1.00000000 lowCoverage 0.946927 0.8828715 0.0635769 6 0.948216 0.8897516 0.0584639 1.0375e-05 9.9932e-01 weaklyHypermeth 1.9953e-04 1.00000000 weaklyHypermeth 1.0841e-02 0.97374190 weaklyHypermeth 1.6131e-01 1.00000 insignificant 0.0442652 1.3723e-01 lowCoverage 1.0000e+00 lowCoverage 0.946927 0.968085 -0.02284411 6 0.948216 0.969415 -0.0211991 9.3477e-01 1.2880e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9851e-01 1.9238e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.00962326 7.9873e-01 lowCoverage 1.000000 lowCoverage 0.8828715 0.968085 -0.0870647 6 0.8897516 0.969415 -0.0796630 0.9955783 1.5618e-05 weaklyHypometh 1.00000 3.6320e-04 weaklyHypometh 0.9970865 3.1834e-03 weaklyHypometh 1 6.8253e-02 weaklyHypometh -0.0538885 1.7235e-01 lowCoverage 1.0000000 lowCoverage chr13 39109450 39110450 43531 LHFP ENSG00000183722 0.812539 258 6 0.596992 62 5 0.737434 62 6 0.853307 185 6 0.840534 58 4 0.772966 176 6 0.734151 88 6 0.859127 75 6 0.720068 68 6 0.735429 111 6 0.810264 180 6 0.749110 58 6 0.893611 119 6 0.730769 26 1 0.812304 106 6 0.712623 68 5 0.645105 63 5 0.739957 163 6 0.741501 58 5 0.85221 152 6 0.86905 44 6 0.90400 69 6 0.868616 161 6 0.787879 44 3 0.888889 38 3 0.860209 112 6 0.557598 56 3 0.873249 54 6 0.731723 96 6 0.75867 126 6 0.789829 128 6 0.816553 232 6 0.555466 109 5 0.697397 85 6 0.6627451 60 4 0.7528721 77 6 0.837074 65 3 0.739507 127 6 0.875615 214 6 0.856338 186 5 0.86064 285 6 0.862440 215 6 0.919050 238 6 0.810871 0.662550 0.762941 0.880543 0.869401 0.805591 0.772650 0.887019 0.698938 0.774291 0.845148 0.757497 0.89907 NA 0.843966 0.762364 0.687987 0.768626 0.750884 0.855889 0.861237 0.913185 0.887995 0.751013 0.881104 0.880091 0.619942 0.881604 0.774655 0.790395 0.819286 0.836987 0.6143009 0.7096654 0.7154174 0.7725030 0.836534 0.7559581 0.891293 0.880785 0.885289 0.886735 0.93329 2 0.796253 0.833621 -0.02695824 6 0.790216 0.817396 -0.02718058 0.932924 0.15168247 insignificant 1 1.00000 insignificant 0.943750 0.01405666 weaklyHypometh 1 1.00000 insignificant -0.0413558 0.2172397 insignificant 1 insignificant 0.796253 0.7131931 0.096343 6 0.790216 0.7286453 0.0615704 1.9075e-06 6.7890e-01 weaklyHypermeth 3.2331e-05 1.0000e+00 weaklyHypermeth 3.7962e-03 6.3343e-01 weaklyHypermeth 5.7518e-02 1.00000000 weaklyHypermeth 0.0599898 1.9840e-01 insignificant 1.0000e+00 insignificant 0.796253 0.880492 -0.0834277 6 0.790216 0.872053 -0.0818373 9.9999e-01 2.9621e-04 weaklyHypometh 1.0000e+00 9.8735e-02 weaklyHypometh 1.0000e+00 1.6511e-05 weaklyHypometh 1.0000e+00 8.2557e-03 weaklyHypometh -0.1073170 3.5322e-05 weaklyHypometh 0.00883062 weaklyHypometh 0.833621 0.7131931 0.1223500 6 0.817396 0.7286453 0.0887510 3.9882e-05 9.0136e-01 weaklyHypermeth 6.5380e-04 1.00000000 weaklyHypermeth 3.9878e-04 0.96881975 weaklyHypermeth 9.0632e-03 1.00000 weaklyHypermeth 0.1013457 5.8940e-02 insignificant 9.4295e-01 insignificant 0.833621 0.880492 -0.05587126 6 0.817396 0.872053 -0.0546568 9.9387e-01 2.8489e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.4308e-01 6.7994e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.06596116 4.5722e-02 weaklyHypometh 1.000000 insignificant 0.7131931 0.880492 -0.1775473 6 0.7286453 0.872053 -0.1434077 0.9982676 3.8647e-07 weaklyHypometh 1.00000 1.1042e-05 weaklyHypometh 0.9981895 1.3721e-04 weaklyHypometh 1 4.7315e-03 weaklyHypometh -0.1673068 6.4098e-03 weaklyHypometh 0.1602462 insignificant chr13 39613350 39614350 43540 ENSG00000212553 0.777034 316 7 0.679861 132 7 0.777206 97 7 0.812916 158 7 0.775510 98 7 0.829206 262 7 0.738829 115 7 0.753589 90 7 0.764103 93 7 0.808054 104 7 0.814237 189 7 0.765590 80 7 0.823819 145 7 NA 0 0 0.748269 140 7 0.769199 118 7 0.735931 71 7 0.789286 141 7 0.806864 167 7 0.82520 289 7 0.86291 55 6 0.85243 75 7 0.779635 182 7 0.794553 69 7 0.781463 58 7 0.827751 208 7 0.782792 64 6 0.802041 56 7 0.799631 100 7 0.76626 158 7 0.777738 144 7 0.794081 341 7 0.724936 112 7 0.697279 106 7 0.7516891 118 7 0.7365946 80 7 0.800902 68 7 0.812358 172 7 0.856545 328 7 0.824156 265 7 0.74888 160 7 0.820094 216 7 0.835442 232 7 0.783954 0.682960 0.780386 0.812478 0.783841 0.829359 0.741626 0.752125 0.766339 0.811290 0.819670 0.769464 0.83045 NA 0.757346 0.773864 0.745984 0.792158 0.809214 0.825304 0.858006 0.851419 0.787072 0.796912 0.789539 0.828384 0.785514 0.799438 0.806446 0.770335 0.779647 0.795831 0.7299252 0.7036027 0.7550072 0.7413510 0.800460 0.8117356 0.862438 0.828607 0.750352 0.826492 0.84183 7 0.786096 0.801325 -0.01323412 7 0.785018 0.798157 -0.01313929 0.872421 0.25783923 insignificant 1 1.00000 insignificant 0.861773 0.24396086 insignificant 1 1.00000 insignificant -0.0231063 0.0732591 insignificant 1 insignificant 0.786096 0.7621951 0.026156 7 0.785018 0.7591165 0.0259010 1.1400e-01 9.7784e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.1950e-01 9.6943e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0247085 2.5906e-01 insignificant 1.0000e+00 insignificant 0.786096 0.814321 -0.0331600 7 0.785018 0.822361 -0.0373432 9.7506e-01 3.5850e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.7670e-01 2.4862e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0383559 1.0593e-01 insignificant 1.00000000 insignificant 0.801325 0.7621951 0.0388968 7 0.798157 0.7591165 0.0390403 3.0945e-02 9.8762e-01 weaklyHypermeth 3.0339e-01 1.00000000 insignificant 5.4151e-02 0.99295678 insignificant 6.1535e-01 1.00000 insignificant 0.0478148 4.8238e-02 weaklyHypermeth 8.3168e-01 insignificant 0.801325 0.814321 -0.02337626 7 0.798157 0.822361 -0.0242039 9.4348e-01 5.7404e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.0253e-01 5.0183e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01524966 4.7870e-01 insignificant 1.000000 insignificant 0.7621951 0.814321 -0.0647358 7 0.7591165 0.822361 -0.0632442 0.9985304 5.9779e-03 weaklyHypometh 1.00000 8.6636e-02 weaklyHypometh 0.9990415 2.4147e-02 weaklyHypometh 1 3.6040e-01 insignificant -0.0630644 3.7072e-02 weaklyHypometh 0.5884444 insignificant chr13 40777350 40778350 43562 ENSG00000218075 0.838384 141 5 0.603216 84 5 0.723901 59 5 0.761500 172 5 0.747359 86 5 0.785313 308 5 0.779722 67 5 0.780072 102 5 0.826587 55 5 0.830827 80 5 0.615416 136 5 0.775556 60 5 0.854214 67 4 0.649183 70 4 0.770926 121 5 0.798611 49 4 0.800000 8 0 0.737753 172 5 0.720833 72 4 0.68531 196 5 0.77083 30 3 0.73987 72 5 0.716667 109 5 0.796528 65 5 0.573016 48 5 0.784274 127 5 0.867208 51 5 0.613333 14 1 0.832863 61 4 0.62497 102 5 0.734444 86 5 0.744881 323 5 0.625317 72 5 0.734848 51 5 0.5944599 127 5 0.6933333 19 3 0.794063 59 5 0.771337 120 5 0.852270 166 5 0.809342 169 5 0.70319 201 5 0.848730 139 5 0.842496 208 5 0.789155 0.593106 0.557895 0.854392 0.739900 0.776303 0.721060 0.748865 0.813262 0.806688 0.733865 0.770058 0.78959 0.742178 0.649136 0.795175 0.863158 0.774971 0.680921 0.793976 0.684868 0.894489 0.850316 0.752741 0.674336 0.737468 0.878947 0.576667 0.733680 0.607015 0.702778 0.763895 0.6579777 0.7042265 0.7021179 0.7771930 0.705810 0.6932393 0.722215 0.795522 0.848146 0.836905 0.82838 4 0.764146 0.758272 0.00039726 5 0.761264 0.777941 -0.01667703 0.833109 0.68537637 insignificant 1 1.00000 insignificant 0.798093 0.87789861 insignificant 1 1.00000 insignificant 0.0209936 0.4968762 lowCoverage 1 lowCoverage 0.764371 0.6986607 0.060293 5 0.787790 0.6754369 0.1123534 7.1540e-02 9.9997e-01 insignificant 6.6240e-01 1.0000e+00 insignificant 1.3674e-01 9.9994e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0520076 1.9156e-01 lowCoverage 1.0000e+00 lowCoverage 0.764371 0.821065 -0.0511277 5 0.787790 0.737940 0.0498507 9.8092e-01 2.1498e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9251e-01 2.8650e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0569707 1.2158e-01 lowCoverage 1.00000000 lowCoverage 0.758272 0.6973094 0.0604386 5 0.777941 0.6348665 0.1430747 2.7184e-02 9.9984e-01 weaklyHypermeth 2.7184e-01 1.00000000 insignificant 1.3096e-01 0.99615628 insignificant 1.0000e+00 1.00000 insignificant 0.0310140 4.7123e-01 lowCoverage 1.0000e+00 lowCoverage 0.758272 0.820658 -0.05318615 5 0.777941 0.705182 0.0727591 9.0477e-01 2.5574e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.7944e-01 1.7871e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.07796431 6.6048e-02 lowCoverage 1.000000 lowCoverage 0.6986607 0.821065 -0.1139733 5 0.6754369 0.737940 -0.0625027 0.9999983 6.9955e-03 weaklyHypometh 1.00000 9.7160e-02 weaklyHypometh 0.9999999 2.9416e-02 weaklyHypometh 1 4.1431e-01 insignificant -0.1089783 3.2075e-02 lowCoverage 0.5528193 lowCoverage chr13 42440350 42441350 43598 ENSG00000217498 0.560658 76 7 0.502881 124 7 0.582908 104 7 0.432810 58 6 0.316484 80 6 0.538757 129 6 0.442624 115 5 0.494575 113 7 0.410226 97 6 0.357008 82 5 0.519513 179 7 0.475794 106 4 0.557458 146 7 0.683333 15 2 0.583552 118 7 0.568189 116 5 0.595646 82 7 0.479798 43 4 0.587160 79 4 0.59337 100 7 0.33333 33 2 0.87727 19 1 0.542588 84 6 0.579705 46 7 0.600000 11 1 0.468031 108 7 0.195238 22 2 0.500000 25 3 0.525665 70 4 0.61576 140 7 0.378125 90 4 0.275717 73 4 0.669981 77 5 0.805337 90 5 0.7585227 126 3 0.8750000 7 0 0.839611 93 7 0.403968 52 4 0.656349 69 7 0.667586 66 5 0.59280 47 3 0.435185 39 4 0.414286 20 2 0.444015 0.337523 0.488881 0.237600 0.238669 0.524410 0.382716 0.350852 0.239747 0.141585 0.377788 0.366602 0.40413 0.333135 0.516276 0.376728 0.468282 0.381245 0.491393 0.437764 0.274775 0.576716 0.471324 0.533376 0.437443 0.326281 0.257658 0.274775 0.284252 0.476156 0.435272 0.367815 0.5844636 0.7881524 0.7592426 0.8508900 0.801627 0.5051086 0.662312 0.526869 0.470340 0.345345 0.44336 0 0.468096 0.445215 -0.01111815 5 0.516581 0.526775 -0.01019373 0.836134 0.55357620 insignificant 1 1.00000 insignificant 0.786440 0.55833870 insignificant 1 1.00000 insignificant 0.0231842 0.6849268 lowCoverage 1 lowCoverage 0.468096 0.6741573 -0.235748 6 0.516581 0.7282158 -0.2116347 1.0000e+00 6.2045e-11 hypomethylated 1.0000e+00 3.1022e-08 hypomethylated 1.0000e+00 2.1693e-07 hypomethylated 1.0000e+00 0.00021693 hypomethylated -0.2112660 2.8955e-02 lowCoverage 4.9922e-01 lowCoverage 0.468096 0.614108 -0.0662232 3 0.516581 0.595387 -0.0788062 9.0739e-01 4.8949e-03 lowCoverage 1.0000e+00 5.3637e-01 lowCoverage 9.5096e-01 9.4873e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0391031 5.2718e-01 lowCoverage 1.00000000 lowCoverage 0.445215 0.6741573 -0.2087610 5 0.526775 0.7282158 -0.2014410 9.9996e-01 1.3411e-06 hypomethylated 1.0000e+00 0.00067055 hypomethylated 9.9997e-01 0.00022473 hypomethylated 1.0000e+00 0.22473 insignificant -0.2344502 2.2494e-02 lowCoverage 4.4105e-01 lowCoverage 0.445215 0.614108 -0.07681165 2 0.526775 0.595387 -0.0686125 9.4815e-01 3.4260e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.2450e-01 2.5369e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.06228725 4.2462e-01 lowCoverage 1.000000 lowCoverage 0.6741573 0.614108 0.1151110 2 0.7282158 0.595387 0.1328285 0.0133802 9.7417e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.0147603 9.7525e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.1721629 8.5481e-02 lowCoverage 1.0000000 lowCoverage chr13 43736250 43737250 43646 ENSG00000139656 0.901286 402 7 0.920968 411 7 0.737022 194 7 0.947863 405 7 0.953571 90 5 0.913303 513 7 0.883415 113 7 0.845447 338 7 0.817768 210 7 0.887910 198 7 0.864170 371 7 0.792105 83 5 0.844003 288 7 0.881943 148 7 0.864394 285 7 0.954082 63 5 0.730159 27 1 0.703967 406 7 0.876573 279 7 0.91295 361 7 0.82686 86 8 0.45335 195 7 0.918080 229 7 0.607415 188 7 0.850000 99 7 0.947435 444 7 0.709407 167 7 0.896032 74 7 0.791553 270 7 0.89161 533 7 0.892624 374 7 0.923340 417 7 0.767043 268 7 0.684755 105 7 0.8000000 197 4 0.5833333 23 3 0.685250 270 7 0.791767 378 7 0.597596 308 7 0.761533 210 7 0.85228 265 7 0.683400 228 7 0.640771 293 7 0.893387 0.925822 0.777596 0.959376 0.950149 0.919685 0.929229 0.879670 0.829754 0.917132 0.888422 0.856601 0.85473 0.902976 0.856218 0.956930 0.768491 0.725844 0.874328 0.910572 0.948622 0.472810 0.944287 0.816260 0.847463 0.950710 0.833175 0.910614 0.796363 0.917997 0.907073 0.945172 0.8602569 0.7660658 0.9051130 0.7188716 0.772060 0.8484691 0.545276 0.778744 0.870058 0.703598 0.68206 5 0.874253 0.868336 0.00275850 7 0.896494 0.760616 0.13587804 0.721536 0.91136810 insignificant 1 1.00000 insignificant 0.555255 0.93360147 insignificant 1 1.00000 insignificant 0.0526698 0.2718221 insignificant 1 insignificant 0.874228 0.8219178 0.053347 7 0.883556 0.6656844 0.2178711 1.1044e-05 8.3377e-01 weaklyHypermeth 1.6991e-04 1.0000e+00 weaklyHypermeth 8.3944e-03 8.9278e-01 weaklyHypermeth 1.1992e-01 1.00000000 insignificant 0.1429536 6.1245e-03 weaklyHypermeth 1.4938e-01 insignificant 0.874228 0.693252 0.1830453 7 0.883556 0.727554 0.1560013 2.4463e-13 1.0000e+00 weaklyHypermeth 4.8926e-11 1.0000e+00 weaklyHypermeth 9.1034e-07 1.0000e+00 weaklyHypermeth 1.8207e-04 1.0000e+00 weaklyHypermeth 0.1545283 2.3108e-02 weaklyHypermeth 0.96282142 insignificant 0.869466 0.8219178 0.0533853 7 0.855693 0.6656844 0.1900083 2.4970e-03 9.4594e-01 weaklyHypermeth 3.2013e-02 1.00000000 weaklyHypermeth 1.6850e-02 0.90094718 weaklyHypermeth 2.3403e-01 1.00000 insignificant 0.0902838 1.2026e-01 insignificant 1.0000e+00 insignificant 0.869466 0.693252 0.18775707 7 0.855693 0.727554 0.1281385 2.2738e-06 9.9997e-01 weaklyHypermeth 2.5265e-04 1.0000e+00 weaklyHypermeth 6.4534e-05 9.9998e-01 weaklyHypermeth 1.2907e-02 1.0000e+00 weaklyHypermeth 0.10185852 1.3091e-01 insignificant 1.000000 insignificant 0.8219178 0.693252 0.1419606 7 0.6656844 0.727554 -0.0618699 0.0070390 8.3153e-01 weaklyHypermeth 1.00000 1.0000e+00 insignificant 0.0209488 5.1407e-01 weaklyHypermeth 1 1.0000e+00 insignificant 0.0115747 8.4340e-01 insignificant 1.0000000 insignificant chr13 44700550 44701550 43689 KCTD4 ENSG00000180332 0.684668 359 8 0.565401 137 5 0.688966 109 5 0.664371 256 8 0.646368 74 5 0.637807 274 8 0.706000 107 5 0.855406 117 5 0.672009 102 5 0.718434 92 5 0.691367 192 5 0.527778 39 5 0.751714 110 5 0.518353 79 5 0.730116 144 5 0.825000 43 5 0.621199 1916 6 0.683495 335 8 0.807698 134 5 0.68429 295 6 0.73333 45 5 0.66949 96 5 0.615049 144 8 0.518182 66 5 0.672309 177 5 0.736950 211 8 0.550604 116 5 0.575856 54 5 0.616307 116 5 0.68375 217 7 0.629380 208 8 0.576180 259 8 0.558120 103 5 0.682500 134 5 0.5406532 210 5 1.0000000 30 1 0.485317 72 5 0.702049 178 8 0.613526 312 8 0.695350 234 7 0.66914 339 8 0.743989 282 7 0.650700 218 8 0.802280 0.646187 0.691608 0.753164 0.784651 0.760258 0.758373 0.881327 0.744052 0.783465 0.720865 0.701575 0.79029 0.779076 0.768860 0.876969 0.823635 0.732493 0.827590 0.754711 0.812336 0.722485 0.799030 0.733178 0.741028 0.754313 0.691028 0.721934 0.783939 0.754203 0.751844 0.771801 0.5935544 0.7594980 0.5821664 0.7750407 0.634739 0.8166844 0.739963 0.788312 0.762476 0.849950 0.78076 5 0.859963 0.783245 0.03611295 5 0.566576 0.529498 0.03707758 0.029417 0.85935997 weaklyHypermeth 1 1.00000 insignificant 0.136957 0.68075829 insignificant 1 1.00000 insignificant 0.0525723 0.0722778 insignificant 1 insignificant 0.859963 0.7359010 0.106794 5 0.566576 0.5643686 0.0022072 3.0848e-04 9.9603e-01 weaklyHypermeth 3.9048e-03 1.0000e+00 weaklyHypermeth 2.1319e-02 9.9484e-01 weaklyHypermeth 2.7687e-01 1.00000000 insignificant 0.0225821 7.8364e-01 lowCoverage 1.0000e+00 lowCoverage 0.860138 0.787004 0.0391406 5 0.629529 0.604298 0.0252306 5.1303e-01 3.5071e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7944e-01 2.8945e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0094819 7.5302e-01 insignificant 1.00000000 insignificant 0.783245 0.7359010 0.0669195 5 0.529498 0.5643686 -0.0348704 2.6429e-02 9.9983e-01 weaklyHypermeth 2.6696e-01 1.00000000 insignificant 2.8772e-01 0.99748686 insignificant 1.0000e+00 1.00000 insignificant -0.0299902 7.1643e-01 lowCoverage 1.0000e+00 lowCoverage 0.783705 0.787004 -0.01155017 5 0.588331 0.604298 -0.0159667 9.3585e-01 9.0834e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6559e-01 4.1896e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.04309038 1.7547e-01 insignificant 1.000000 insignificant 0.7355372 0.787004 -0.0755033 5 0.5159652 0.604298 -0.0883329 0.9997048 2.3453e-03 weaklyHypometh 1.00000 3.8447e-02 weaklyHypometh 0.9998445 1.4526e-02 weaklyHypometh 1 2.3058e-01 insignificant -0.0131002 8.7395e-01 lowCoverage 1.0000000 lowCoverage chr13 44782050 44783050 43695 ENSG00000221163 0.680347 396 10 0.317377 202 9 0.697467 216 10 0.598634 279 10 0.548120 190 10 0.621922 292 7 0.535078 160 10 0.726679 175 9 0.629773 119 10 0.755288 113 7 0.577043 281 10 0.674691 134 7 0.682781 187 10 0.677097 121 10 0.690354 159 10 0.768699 69 5 0.753495 2340 7 0.560381 317 11 0.606984 197 7 0.61828 237 7 0.52905 70 7 0.62286 47 5 0.571608 270 10 0.613787 73 8 0.637302 98 7 0.641539 229 7 0.708219 119 7 0.535417 32 3 0.654021 181 10 0.52565 189 7 0.397235 177 7 0.700033 240 7 0.483400 195 10 0.473953 150 10 0.6527400 159 9 0.5944444 25 4 0.577402 139 7 0.625469 201 7 0.619339 383 10 0.666398 390 10 0.63458 310 12 0.636271 340 10 0.683877 358 12 0.737209 0.470502 0.631909 0.643755 0.682551 0.608934 0.563491 0.637075 0.692198 0.805759 0.617757 0.667255 0.69971 0.737290 0.752021 0.809635 0.765971 0.688626 0.607045 0.667823 0.671939 0.618260 0.657555 0.805090 0.606800 0.609251 0.643519 0.603834 0.584250 0.608684 0.556143 0.650984 0.5146929 0.5477054 0.5475977 0.5958561 0.665734 0.6223625 0.708370 0.725783 0.703728 0.717259 0.69431 3 0.540440 0.602899 0.02553766 9 0.663126 0.623283 0.03984304 0.041954 0.81038976 weaklyHypermeth 1 1.00000 insignificant 0.221608 0.98229961 insignificant 1 1.00000 insignificant 0.0412974 0.2374874 insignificant 1 insignificant 0.540304 0.5350978 0.091850 9 0.640432 0.5784181 0.0620135 2.8310e-05 9.9801e-01 weaklyHypermeth 4.1633e-04 1.0000e+00 weaklyHypermeth 6.0536e-03 9.9835e-01 weaklyHypermeth 9.0353e-02 1.00000000 weaklyHypermeth 0.0681232 9.8420e-02 insignificant 1.0000e+00 insignificant 0.540142 0.637282 -0.0432589 10 0.623321 0.628062 -0.0047407 9.3994e-01 9.7983e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 8.8533e-01 3.8011e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0120676 6.4372e-01 insignificant 1.00000000 insignificant 0.602207 0.5350978 0.0612086 9 0.573054 0.5784181 -0.0053642 1.3788e-02 9.0874e-01 weaklyHypermeth 1.4987e-01 1.00000000 insignificant 1.8969e-01 0.89341198 insignificant 1.0000e+00 1.00000 insignificant 0.0268257 5.0890e-01 insignificant 1.0000e+00 insignificant 0.602557 0.637079 -0.05131430 9 0.595276 0.603266 -0.0079900 7.6821e-01 1.6658e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 7.7827e-01 7.9273e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.05336501 7.6229e-02 insignificant 1.000000 insignificant 0.5345622 0.637233 -0.1213024 9 0.5483051 0.610642 -0.0623372 0.9994775 3.5796e-06 weaklyHypometh 1.00000 9.4200e-05 weaklyHypometh 0.9974955 2.3084e-03 weaklyHypometh 1 5.1298e-02 weaklyHypometh -0.0801908 4.5192e-02 weaklyHypometh 0.6847210 insignificant chr13 45255050 45256050 43709 ENSG00000209627 0.967046 465 10 0.928746 209 10 0.949111 142 10 0.966736 404 10 0.869661 121 10 0.937951 332 8 0.953974 117 10 0.959375 173 10 0.773232 72 8 0.982680 150 10 0.943960 398 10 0.914242 77 10 0.878513 236 10 0.963214 112 10 0.980713 229 10 0.727273 125 8 0.000000 1 0 0.943067 612 10 0.976269 429 10 0.97657 421 10 0.98578 154 10 0.97752 117 10 0.952114 271 10 0.897222 87 9 0.968170 293 7 0.957357 344 10 0.917233 149 10 0.940693 54 7 0.956879 557 10 0.95392 396 10 0.961450 357 10 0.957038 438 10 0.949853 195 10 0.896476 250 10 0.9390244 165 7 0.7500000 32 4 0.766222 124 9 0.948188 379 10 0.979937 557 10 0.974119 439 10 0.97806 399 10 0.977160 433 10 0.953032 455 10 0.964925 0.944612 0.950146 0.963785 0.859488 0.927003 0.966201 0.943585 0.861606 0.978300 0.943626 0.933063 0.95777 0.971429 0.980344 0.841584 NA 0.933677 0.976407 0.981188 0.987899 0.979276 0.961623 0.860836 0.958899 0.947375 0.907728 0.914521 0.959673 0.958064 0.963446 0.938281 0.9476164 0.8996378 0.8953815 0.8029637 0.876851 0.9437984 0.973632 0.970018 0.975872 0.978726 0.95251 6 0.953320 0.954616 -0.00141070 10 0.895228 0.967503 -0.07227510 0.858670 0.43112864 insignificant 1 1.00000 insignificant 0.848682 0.24357673 insignificant 1 1.00000 insignificant -0.0724983 0.1565706 insignificant 1 insignificant 0.953290 0.9048035 0.045918 10 0.866654 0.8337724 0.0328819 2.2828e-02 9.9959e-01 weaklyHypermeth 2.2828e-01 1.0000e+00 insignificant 1.1553e-01 9.4311e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0046559 9.4058e-01 insignificant 1.0000e+00 insignificant 0.953498 0.973281 -0.0198033 10 0.957563 0.975713 -0.0181499 9.9901e-01 6.7595e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7922e-01 1.1319e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0928443 7.2990e-02 insignificant 1.00000000 insignificant 0.954517 0.9055944 0.0476807 10 0.954505 0.9171496 0.0373552 1.7731e-02 9.8837e-01 weaklyHypermeth 1.8862e-01 1.00000000 insignificant 3.7376e-02 0.93511346 weaklyHypermeth 4.5031e-01 1.00000 insignificant 0.0771543 9.7694e-02 insignificant 1.0000e+00 insignificant 0.954574 0.973281 -0.01901849 10 0.958641 0.975713 -0.0170725 9.9220e-01 1.0980e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.4851e-01 4.4878e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02034598 3.2413e-02 weaklyHypometh 1.000000 insignificant 0.9055944 0.973269 -0.0667609 10 0.9171496 0.973285 -0.0561349 0.9998304 2.2824e-02 weaklyHypometh 1.00000 2.8178e-01 insignificant 0.9962195 9.2196e-02 insignificant 1 1.0000e+00 insignificant -0.0975002 4.9446e-02 weaklyHypometh 0.7271543 insignificant chr13 47217050 47218050 43749 ENSG00000209657,ENSG00000222527 0.746007 69 5 0.547222 33 2 0.780000 22 2 0.748306 69 5 0.735797 106 5 0.461111 24 1 0.660470 61 5 0.845238 24 1 0.766667 26 4 0.709231 52 4 0.625000 25 1 0.575758 49 5 0.689762 76 5 0.746429 48 5 0.729060 54 5 0.590980 72 5 0.500000 10 0 0.704658 134 6 0.500000 2 0 0.73077 16 1 0.85714 15 1 0.81111 37 4 0.689963 60 5 0.861111 27 4 0.823631 73 5 1.000000 3 0 0.566667 13 1 0.772222 25 3 0.699038 77 5 0.82500 9 1 0.719048 22 2 0.948718 15 1 0.625909 56 5 0.709524 41 5 0.7100000 24 4 0.8000000 9 0 0.640000 38 4 0.600000 7 1 0.722222 30 1 0.666667 31 1 0.63106 51 5 0.700000 56 5 0.760000 39 5 0.866230 0.605769 0.880769 0.876946 0.812012 0.618590 0.665927 0.810897 0.801282 0.801775 0.836538 0.638112 0.77019 0.753247 0.808185 0.668552 0.768521 0.775174 0.653493 0.763314 0.884615 0.946581 0.795478 0.916667 0.879816 0.843357 0.519231 0.814103 0.668269 0.821023 0.662088 0.754599 0.6993007 0.7857143 0.8000000 0.9615385 0.671795 0.7463070 0.865385 0.858974 0.737936 0.791667 0.93077 0 0.685185 0.739362 -0.03432365 4 0.715231 0.786286 -0.07105492 0.719817 0.06312030 lowCoverage 1 1.00000 lowCoverage 0.964034 0.11947122 lowCoverage 1 1.00000 lowCoverage -0.1281812 0.0057262 lowCoverage 1 lowCoverage 0.685185 0.6742857 0.046443 3 0.715231 0.6147741 0.1004569 4.7920e-02 4.7409e-01 lowCoverage 4.5638e-01 1.0000e+00 lowCoverage 4.5862e-01 3.6260e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage -0.0112823 7.7411e-01 lowCoverage 1.0000e+00 lowCoverage 0.686458 0.763285 -0.0021496 5 0.692232 0.690805 0.0014279 5.1648e-01 4.5818e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.7727e-01 3.0084e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0263657 4.3284e-01 lowCoverage 1.00000000 lowCoverage 0.739362 0.6742857 0.0669796 2 0.786286 0.6147741 0.1715118 2.5576e-01 9.1406e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 2.3728e-01 0.92801677 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.1168989 2.1488e-02 lowCoverage 4.2976e-01 lowCoverage 0.731302 0.763285 0.02189357 4 0.718982 0.690805 0.0281775 3.0178e-01 5.3451e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 4.6621e-01 6.9801e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.10181543 2.4760e-02 lowCoverage 1.000000 lowCoverage 0.6763006 0.763285 -0.0556840 3 0.6606837 0.690805 -0.0301209 0.6165909 1.4888e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.4538277 4.6982e-01 lowCoverage 1 1.0000e+00 lowCoverage -0.0150835 6.9627e-01 lowCoverage 1.0000000 lowCoverage chr13 50723650 50724650 43849 FAM124A ENSG00000150510 0.944374 1402 20 0.965410 760 17 0.918195 389 19 0.957858 1123 20 0.985986 246 20 0.910787 967 20 0.840468 279 18 0.937089 597 19 0.959278 477 18 0.910013 575 20 0.912985 1017 20 0.824281 160 16 0.868979 731 18 0.974307 212 15 0.898503 556 18 0.959722 214 7 0.955185 90 8 0.946787 1021 20 0.946690 808 20 0.96218 927 20 0.94174 252 19 0.89473 344 14 0.938619 460 20 0.856445 175 14 0.964071 243 19 0.924918 990 20 0.965258 365 18 0.947766 166 12 0.877380 950 20 0.91792 1128 20 0.913845 858 20 0.960272 1080 20 0.916600 495 16 0.779955 404 20 0.9151235 478 11 0.8217424 115 11 0.713454 258 12 0.865295 849 20 0.922888 865 20 0.960445 1048 20 0.95933 1182 20 0.880879 819 20 0.941639 982 20 0.939139 0.961518 0.945990 0.962503 0.983231 0.949487 0.942732 0.938027 0.953400 0.950643 0.965655 0.877292 0.95208 0.956229 0.944669 0.974905 0.926856 0.944317 0.954382 0.962530 0.942469 0.931050 0.936547 0.899744 0.929989 0.946664 0.948460 0.955161 0.968228 0.957379 0.953756 0.961090 0.9025509 0.9094020 0.8805350 0.8723756 0.877847 0.9071149 0.962365 0.963419 0.948784 0.936343 0.94878 8 0.951633 0.953774 -0.00168925 20 0.904474 0.904687 -0.00021377 0.935191 0.14494808 insignificant 1 1.00000 insignificant 0.943224 0.27543582 insignificant 1 1.00000 insignificant 0.0037071 0.7939989 insignificant 1 insignificant 0.951614 0.9191375 0.033990 20 0.891447 0.8279680 0.0634792 7.6922e-13 9.8691e-01 weaklyHypermeth 2.1367e-11 1.0000e+00 weaklyHypermeth 3.4584e-05 9.4754e-01 weaklyHypermeth 9.1011e-04 1.00000000 weaklyHypermeth 0.0935927 3.3890e-02 weaklyHypermeth 5.5558e-01 insignificant 0.951758 0.954453 -0.0028767 20 0.910088 0.908657 0.0014303 6.3669e-01 3.0148e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.7622e-02 8.0014e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0040814 8.2332e-01 insignificant 1.00000000 insignificant 0.953754 0.9184302 0.0354903 20 0.872938 0.7589706 0.1139675 1.9154e-08 9.9892e-01 weaklyHypermeth 4.5605e-07 1.00000000 weaklyHypermeth 1.8295e-04 0.97240941 weaklyHypermeth 4.4622e-03 1.00000 weaklyHypermeth 0.0898856 3.9180e-02 weaklyHypermeth 6.8737e-01 insignificant 0.954007 0.954453 -0.00077003 20 0.918279 0.908657 0.0096213 1.4626e-01 7.4568e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.0175e-02 9.0726e-01 inconclusive 4.6251e-01 1.0000e+00 insignificant -0.00778851 6.7420e-01 insignificant 1.000000 insignificant 0.9194915 0.954453 -0.0348337 20 0.8673950 0.908657 -0.0412623 0.9802718 1.0667e-05 weaklyHypometh 1.00000 2.6017e-04 weaklyHypometh 0.7047704 4.9477e-03 weaklyHypometh 1 9.1625e-02 weaklyHypometh -0.0976741 2.9934e-02 weaklyHypometh 0.5442526 insignificant chr13 51395150 51396150 43871 ENSG00000174893 0.903191 359 6 0.713399 256 6 0.972222 40 4 0.951054 321 6 0.913333 67 6 0.949803 419 6 0.891332 129 6 0.931073 87 6 0.916301 53 5 0.909524 43 3 0.895471 253 6 1.000000 15 1 0.990741 48 4 0.977778 38 3 0.930556 42 5 0.800000 14 1 NA 0 0 0.933983 503 6 0.929008 194 5 0.91241 223 6 0.84524 76 6 1.00000 26 2 0.943753 120 6 0.816026 63 4 0.934174 351 6 0.968065 283 6 0.944444 46 4 0.944444 68 5 0.883092 169 5 0.96535 351 6 0.939962 378 6 0.888191 292 6 0.750148 232 5 0.531003 160 6 0.5056250 183 4 0.9227848 313 6 0.846125 166 6 0.894014 289 6 0.950283 414 6 0.968562 265 6 0.95088 282 6 0.950121 221 5 0.953910 307 6 0.918940 0.867927 0.981609 0.950675 0.935724 0.957987 0.884831 0.949111 0.879250 0.888736 0.924421 0.996717 0.97663 0.943908 0.928161 0.644993 NA 0.942945 0.924837 0.922736 0.974795 1.000000 0.927882 0.830451 0.940687 0.971329 0.859387 0.988506 0.889650 0.978757 0.947432 0.918540 0.7996155 0.6880131 0.4671732 0.9509234 0.886769 0.9138146 0.954356 0.980352 0.955968 0.953818 0.94615 2 0.923920 0.945995 -0.01930801 6 0.928601 0.874050 0.05455081 0.958187 0.07706302 insignificant 1 1.00000 insignificant 0.876668 0.53535232 insignificant 1 1.00000 insignificant -0.0058243 0.7904557 lowCoverage 1 lowCoverage 0.923622 0.8131050 0.132335 6 0.857172 0.6757337 0.1814387 3.6991e-06 9.9994e-01 weaklyHypermeth 6.0641e-05 1.0000e+00 weaklyHypermeth 3.3585e-05 9.9923e-01 weaklyHypermeth 9.0771e-04 1.00000000 weaklyHypermeth 0.1752875 6.5591e-02 lowCoverage 9.6567e-01 lowCoverage 0.923896 0.955003 -0.0326798 6 0.916701 0.953227 -0.0365259 9.9963e-01 1.1507e-02 weaklyHypometh 1.0000e+00 7.6714e-01 insignificant 9.1967e-01 3.8096e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0378468 2.4734e-02 lowCoverage 0.97828104 lowCoverage 0.946396 0.8143177 0.1305987 6 0.936392 0.7883560 0.1480358 1.2923e-05 9.9996e-01 weaklyHypermeth 2.3932e-04 1.00000000 weaklyHypermeth 5.4528e-05 0.99954027 weaklyHypermeth 1.5147e-03 1.00000 weaklyHypermeth 0.1811118 5.9406e-02 insignificant 9.4295e-01 insignificant 0.946396 0.955003 -0.01192624 6 0.936392 0.953227 -0.0168351 9.6377e-01 2.9485e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.7869e-01 8.5279e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03202245 6.7114e-02 insignificant 1.000000 insignificant 0.8143177 0.955003 -0.1473888 6 0.7883560 0.953227 -0.1648710 0.9999398 1.3440e-03 weaklyHypometh 1.00000 2.3173e-02 weaklyHypometh 0.9990020 2.3713e-04 weaklyHypometh 1 7.6871e-03 weaklyHypometh -0.2131342 3.5530e-02 weaklyHypometh 0.5730695 insignificant chr13 62661750 62662750 43919 ENSG00000219371 0.796470 220 5 0.674797 118 6 0.708746 128 5 0.788689 161 5 0.710913 59 6 0.624002 452 6 0.765199 116 5 0.797012 168 6 0.655857 132 5 0.797890 113 5 0.795289 203 6 0.666905 91 5 0.802540 131 5 1.000000 36 2 0.680287 106 6 0.741925 55 5 0.716941 59 4 0.801209 139 5 0.739621 212 6 0.74805 300 6 0.73081 76 6 0.71709 119 6 0.713527 118 6 0.646046 135 6 0.678125 102 6 0.717057 237 6 0.706935 114 6 0.784241 107 6 0.791973 122 6 0.75349 220 6 0.805727 207 6 0.567879 351 6 0.695725 100 6 0.686619 105 6 0.4650134 134 6 0.5623016 67 4 0.687826 174 6 0.659839 229 6 0.795861 273 6 0.778025 215 6 0.75956 189 6 0.783635 226 5 0.820126 189 6 0.772949 0.710691 0.730983 0.787300 0.740073 0.739757 0.743507 0.828318 0.724082 0.782674 0.805918 0.722576 0.80692 0.810913 0.807561 0.757099 0.712180 0.791752 0.732589 0.739760 0.745948 0.712294 0.726228 0.768122 0.757475 0.759522 0.708766 0.749581 0.773485 0.771014 0.801737 0.758852 0.6869720 0.7182121 0.5064376 0.6144597 0.730717 0.6739315 0.816968 0.794336 0.788505 0.774726 0.81883 5 0.781594 0.796111 0.00486092 6 0.643353 0.682441 -0.03908801 0.387465 0.68564430 insignificant 1 1.00000 insignificant 0.059326 0.92299299 insignificant 1 1.00000 insignificant 0.0328755 0.2233351 insignificant 1 insignificant 0.782115 0.6761434 0.114735 6 0.750578 0.6258860 0.1246923 2.2500e-08 1.0000e+00 weaklyHypermeth 4.7873e-07 1.0000e+00 weaklyHypermeth 1.5095e-04 9.9998e-01 weaklyHypermeth 3.4307e-03 1.00000000 weaklyHypermeth 0.1243964 2.0018e-02 weaklyHypermeth 4.0036e-01 insignificant 0.782115 0.797619 -0.0392634 6 0.750578 0.784394 -0.0338153 9.9209e-01 8.4598e-03 weaklyHypometh 1.0000e+00 6.0427e-01 insignificant 9.7992e-01 5.6718e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0368245 8.9290e-02 insignificant 1.00000000 insignificant 0.797575 0.6761434 0.1164305 6 0.740626 0.6258860 0.1147395 4.9394e-07 9.9852e-01 weaklyHypermeth 1.0290e-05 1.00000000 weaklyHypermeth 3.2112e-03 0.98075975 weaklyHypermeth 5.6336e-02 1.00000 weaklyHypermeth 0.0915209 6.5659e-02 insignificant 9.9831e-01 insignificant 0.797575 0.797619 -0.04351853 6 0.740626 0.784394 -0.0437682 9.9906e-01 5.3396e-04 weaklyHypometh 1.0000e+00 1.7799e-01 insignificant 9.9969e-01 3.3615e-03 weaklyHypometh 1.0000e+00 8.4038e-01 insignificant -0.06970006 5.7775e-03 weaklyHypometh 0.641942 insignificant 0.6761434 0.797619 -0.1522364 6 0.6258860 0.784394 -0.1585076 1.0000000 6.5281e-07 weaklyHypometh 1.00000 1.7644e-05 weaklyHypometh 0.9999999 4.6600e-05 weaklyHypometh 1 1.7259e-03 weaklyHypometh -0.1612210 7.1675e-03 weaklyHypometh 0.1693738 insignificant chr13 72458050 72459050 43985 PIBF1 ENSG00000083535 0.838124 477 16 0.762691 344 15 0.739420 163 16 0.774746 242 14 0.812153 140 9 0.849113 346 14 0.753390 228 14 0.779660 231 14 0.816781 193 13 0.907704 157 10 0.834070 551 16 0.807059 123 11 0.830955 329 15 0.800000 16 1 0.805199 200 16 0.804210 80 7 0.741786 170 14 0.817091 246 15 0.820619 324 13 0.82334 389 16 0.90686 80 8 0.82044 101 8 0.813121 321 13 0.851885 98 9 0.865051 71 7 0.795865 437 16 0.835697 134 9 0.479167 31 4 0.733963 270 11 0.81386 496 16 0.803581 411 10 0.858616 502 14 0.716832 272 15 0.679788 234 15 0.7722074 284 16 0.8842269 93 9 0.745288 122 8 0.764715 467 16 0.775034 314 14 0.855125 442 16 0.86640 338 15 0.899550 319 12 0.844465 354 16 0.828719 0.740590 0.727613 0.787188 0.819306 0.821859 0.784778 0.748291 0.797223 0.890857 0.824119 0.814901 0.81154 0.806849 0.804670 0.781926 0.761978 0.837035 0.797434 0.811354 0.877054 0.803994 0.775747 0.767114 0.827246 0.763260 0.794929 0.767509 0.741806 0.807554 0.746419 0.827736 0.6815469 0.6617193 0.7226668 0.8376615 0.763987 0.7342606 0.808525 0.834709 0.847740 0.880210 0.82892 4 0.827844 0.868858 -0.00607146 14 0.812786 0.828712 -0.01592590 0.775174 0.01421624 weaklyHypometh 1 0.94775 insignificant 0.667736 0.01017014 weaklyHypometh 1 1.00000 insignificant 0.0077298 0.8172035 insignificant 1 insignificant 0.827844 0.7995924 0.061614 16 0.812786 0.7589640 0.0538220 2.0009e-07 9.9811e-01 weaklyHypermeth 3.6380e-06 1.0000e+00 weaklyHypermeth 5.4699e-04 9.9754e-01 weaklyHypermeth 1.0725e-02 1.00000000 weaklyHypermeth 0.0453957 1.7738e-01 insignificant 1.0000e+00 insignificant 0.827844 0.827391 -0.0372526 16 0.812786 0.853661 -0.0408751 9.9992e-01 2.7479e-03 weaklyHypometh 1.0000e+00 4.3990e-01 insignificant 9.9940e-01 1.2172e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0422095 1.1096e-01 insignificant 1.00000000 insignificant 0.868858 0.7995924 0.0702076 14 0.828712 0.7589640 0.0697479 3.2046e-09 9.9982e-01 weaklyHypermeth 8.0115e-08 1.00000000 weaklyHypermeth 5.1496e-05 0.99725993 weaklyHypermeth 1.4713e-03 1.00000 weaklyHypermeth 0.0376659 3.8854e-01 insignificant 1.0000e+00 insignificant 0.868858 0.827391 -0.02800429 14 0.828712 0.853661 -0.0249492 9.6589e-01 2.6356e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 8.1259e-01 3.8035e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.04993931 2.0388e-01 insignificant 1.000000 insignificant 0.7995924 0.827391 -0.0909026 16 0.7589640 0.853661 -0.0946971 0.9999554 1.3772e-08 weaklyHypometh 1.00000 4.4425e-07 weaklyHypometh 0.9999822 4.2130e-06 weaklyHypometh 1 2.4782e-04 weaklyHypometh -0.0876052 3.4605e-02 weaklyHypometh 0.5673021 insignificant chr13 78118850 78119850 44112 POU4F1 ENSG00000152192 0.767137 210 5 0.829267 269 5 0.5189716 99 5 0.885836 173 5 0.873171 75 5 0.7914824 272 5 0.664040 171 5 0.8866880 94 4 0.8449875 78 2 0.6845238 39 2 0.862675 240 5 0.8121041 45 4 0.590909 56 3 0.4956891 57 3 0.7603276 62 3 0.6857143 36 2 1.000000 1 0 0.7253162 118 3 0.922635 134 2 0.7802441 180 4 0.884387 61 4 0.800000 5 0 0.634532 165 4 0.67979424 132 8 0.566667 13 1 0.674728 264 5 0.583041 56 2 0.7598901 47 3 0.743146 127 2 0.9039254 243 5 0.847938 281 5 0.8314763 200 5 0.8409113 190 5 0.955172 89 3 0.900794 286 4 1.000000 3 0 0.720422 166 5 0.902490 241 5 0.923990 311 5 0.574558 261 5 0.661411 210 5 0.5500368 233 3 0.671069 230 5 0.747802 0.6809161 0.5715465 0.8505761 0.8516621 0.7301531 0.760326 7.7990e-01 0.6113614 0.7679103 0.777669 0.6509593 0.8214545 0.813443 0.910957 0.7320000 NA 0.7617185 0.8525688 0.864009 0.785159 0.9790595 0.844012 0.72456296 0.595369 0.8367958 0.6451088 0.7852308 0.733680 0.8760335 0.8312992 0.825514 0.7874058 0.964138 0.9402381 0.934965 0.769783 0.940753 0.8585573 0.7076954 0.6808599 0.6119723 0.7191295 2 0.7815615 0.8262233 -0.04012001 5 0.621412 0.665744 -0.0443329 0.9218571 0.0584293 insignificant 1 1.00000 insignificant 0.880993 0.5772281 insignificant 1 1 insignificant 0.02662553 0.554279 lowCoverage 1 lowCoverage 0.7823554 0.891282 -0.1050516 5 0.646013 0.822372 -0.1763592 9.9968e-01 1.1715e-03 weaklyHypometh 1.0000e+00 1.9524e-01 insignificant 9.9600e-01 2.5965e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.1175457 3.7066e-02 lowCoverage 8.8053e-01 lowCoverage 0.781939 0.7269076 0.0433981 5 0.654745 0.542120 0.1126247 4.2322e-01 9.0996e-01 insignificant 1.0000e+00 1.000000 insignificant 5.3333e-01 9.9169e-01 insignificant 1.000000 1.000000 insignificant 0.0928730 2.5031e-01 lowCoverage 1.0000000 lowCoverage 0.8273472 0.891282 -0.0522328 5 0.676224 0.822372 -0.1461481 9.5722e-01 9.4203e-03 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.7115e-01 8.2419e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.1441712 1.6969e-02 lowCoverage 4.9909e-01 lowCoverage 0.8286074 0.7274920 0.0914978 5 0.707970 0.602356 0.10561419 3.5335e-03 7.8608e-01 weaklyHypermeth 2.0785e-01 1.000000 insignificant 1.1077e-01 0.87636004 insignificant 1.0000000 1.00000 insignificant 0.0662474 4.0532e-01 lowCoverage 1.000000 lowCoverage 0.891170 0.7304278 0.1499624 5 0.800168 0.677650 0.1225183 1.2335e-02 9.6499e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 7.1675e-02 9.9856e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.2104186 3.0992e-02 lowCoverage 7.7903e-01 lowCoverage chr13 95331150 95332150 44306 ENSG00000217412 0.889243 245 6 0.805135 54 6 0.7340634 85 6 0.939484 116 6 0.757738 44 6 0.8696014 177 6 0.858586 82 6 0.7679622 66 6 0.8349613 60 6 0.7598720 70 6 0.884715 175 6 0.8526144 71 6 0.859793 62 6 NA 0 0 0.9316239 96 6 0.8310866 73 5 0.901852 41 6 0.9759700 146 6 0.937322 66 6 0.8248225 211 6 0.944444 18 1 0.928571 38 6 0.847981 103 6 0.86084055 53 6 0.801587 34 4 0.881884 107 6 0.891270 37 6 0.8750000 15 1 0.597884 49 4 0.8713450 115 6 0.885439 88 6 0.8449893 214 6 0.7291847 87 6 0.584632 71 6 0.826998 109 6 0.881283 49 6 0.804762 38 2 0.803030 71 6 0.896009 235 6 0.900442 280 6 0.887897 169 6 0.8942013 224 6 0.934798 207 6 0.896211 0.8148090 0.7444166 0.9369700 0.7633643 0.8740524 0.860772 7.6907e-01 0.8344623 0.7721383 0.876631 0.8625034 0.8640601 NA 0.946113 0.8291364 0.897412 0.9765710 0.9406393 0.819326 0.940639 0.9246575 0.843693 0.86888083 0.791259 0.8887280 0.9130137 0.8664384 0.655414 0.8720981 0.8882001 0.846776 0.7383888 0.577931 0.8246615 0.882991 0.778180 0.808397 0.8979151 0.9035408 0.8886782 0.8935670 0.9308792 3 0.8628866 0.8484501 0.00601780 6 0.860356 0.855110 0.0052465 0.5947545 0.8215554 insignificant 1 1.00000 insignificant 0.872520 0.4738316 insignificant 1 1 insignificant 0.00089417 0.976503 lowCoverage 1 lowCoverage 0.8628866 0.748235 0.1031702 6 0.860356 0.764160 0.0961967 2.2958e-05 9.9999e-01 weaklyHypermeth 5.5995e-04 1.0000e+00 weaklyHypermeth 8.5153e-03 9.9743e-01 weaklyHypermeth 1.7378e-01 1.0000e+00 insignificant 0.0818488 1.1692e-01 insignificant 1.0000e+00 insignificant 0.862887 0.9076233 -0.0434547 6 0.860356 0.904579 -0.0442230 9.9634e-01 6.2175e-02 insignificant 1.0000e+00 1.000000 insignificant 9.7561e-01 1.1669e-01 insignificant 1.000000 1.000000 insignificant -0.0491722 1.1111e-02 weaklyHypometh 0.5847981 insignificant 0.8484501 0.748235 0.0969755 6 0.855110 0.764160 0.0909502 6.3335e-05 9.9978e-01 weaklyHypermeth 1.8096e-03 1.0000e+00 weaklyHypermeth 4.4776e-03 9.9963e-01 weaklyHypermeth 1.0661e-01 1.0000e+00 insignificant 0.0809546 1.3732e-01 lowCoverage 1.0000e+00 lowCoverage 0.8484501 0.9076233 -0.0538574 6 0.855110 0.904579 -0.04946952 9.9782e-01 1.1402e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 9.4148e-01 0.17505598 insignificant 1.0000000 1.00000 insignificant -0.0500664 8.4909e-02 lowCoverage 1.000000 lowCoverage 0.748235 0.9076233 -0.1530418 6 0.764160 0.904579 -0.1404197 9.9999e-01 6.4584e-06 weaklyHypometh 1.0000e+00 3.2292e-04 weaklyHypometh 9.9977e-01 8.6352e-04 weaklyHypometh 1.0000e+00 5.3970e-02 weaklyHypometh -0.1310210 2.6419e-02 weaklyHypometh 7.3621e-01 insignificant chr13 98496050 98497050 44384 ENSG00000207298 0.880087 164 6 0.787327 108 4 0.8396057 101 6 0.845370 103 6 0.806873 139 6 0.7618132 164 6 0.782206 150 6 0.7921784 157 6 0.6213384 116 6 0.8318071 113 6 0.692457 178 6 0.7303455 115 4 0.795335 137 6 0.7666667 13 1 0.8284722 129 5 0.8488113 112 4 0.888889 131 4 0.7989969 109 6 0.785755 182 6 0.8232156 171 6 0.783497 58 2 0.810707 59 4 0.809304 120 6 0.67424705 99 6 0.920635 52 6 0.842413 157 6 0.660570 96 6 0.8180272 65 3 0.787098 103 6 0.8544596 161 6 0.814237 145 6 0.8112906 239 6 0.8770186 50 4 0.647410 137 6 0.772033 85 6 0.875000 72 4 0.746073 101 6 0.789839 146 6 0.868051 181 6 0.803398 166 6 0.848214 155 6 0.7641012 105 4 0.844103 149 6 0.883839 0.8157060 0.8016887 0.8973097 0.8276944 0.8165756 0.826358 8.1930e-01 0.6708721 0.8853220 0.842783 0.7867200 0.8424751 0.877246 0.873146 0.8204380 0.852160 0.8661508 0.8362123 0.819225 0.914406 0.8284589 0.839843 0.77322546 0.971316 0.8867905 0.6883036 0.8225534 0.809676 0.9094894 0.8404085 0.819092 0.8971668 0.779919 0.7973474 0.892979 0.782669 0.814250 0.9119996 0.8398428 0.8723636 0.8524208 0.9089372 2 0.8198302 0.8146233 0.00238553 6 0.810126 0.727000 0.0831262 0.6486527 0.8786896 insignificant 1 1.00000 insignificant 0.919151 0.7027149 insignificant 1 1 insignificant -0.00349626 0.889483 insignificant 1 insignificant 0.8196594 0.781726 0.0333587 6 0.784448 0.780236 0.0042124 9.3406e-03 9.1814e-01 weaklyHypermeth 1.3344e-01 1.0000e+00 insignificant 2.4476e-01 8.3721e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0108150 7.8394e-01 insignificant 1.0000e+00 insignificant 0.819659 0.8624339 -0.0471169 6 0.784448 0.857455 -0.0730069 9.4246e-01 4.9282e-03 weaklyHypometh 1.0000e+00 0.468675 insignificant 9.3912e-01 1.0191e-02 weaklyHypometh 1.000000 0.849277 insignificant -0.0301961 2.2607e-01 insignificant 1.0000000 insignificant 0.8150888 0.781726 0.0326726 6 0.791857 0.780236 0.0116216 7.6297e-02 9.1449e-01 insignificant 9.0829e-01 1.0000e+00 insignificant 1.4678e-01 9.0742e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0143113 7.3415e-01 insignificant 1.0000e+00 insignificant 0.8150888 0.8624339 -0.0484089 6 0.791857 0.857455 -0.06559770 9.8250e-01 1.3825e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 9.5352e-01 0.12346876 insignificant 1.0000000 1.00000 insignificant -0.0266998 3.5368e-01 insignificant 1.000000 insignificant 0.781726 0.8624339 -0.0786820 6 0.780236 0.857455 -0.0772193 9.9908e-01 3.5449e-04 weaklyHypometh 1.0000e+00 1.1618e-02 weaklyHypometh 9.8882e-01 1.6868e-02 weaklyHypometh 1.0000e+00 4.2170e-01 insignificant -0.0410111 3.3544e-01 insignificant 1.0000e+00 insignificant chr13 99136150 99137150 44420 CLYBL ENSG00000125246 0.441640 240 5 0.330921 411 6 0.4441585 80 5 0.383000 132 6 0.486111 112 6 0.7115980 330 5 0.491472 178 6 0.5619803 115 6 0.5375624 86 5 0.4776942 66 5 0.522675 275 6 0.2950103 60 4 0.367975 57 3 0.3849206 58 3 0.4518519 87 5 0.5900000 37 4 0.868676 442 3 0.5434680 129 5 0.372513 149 5 0.6748816 283 5 0.435897 35 4 0.400000 16 2 0.645089 169 5 0.46579578 95 4 0.493056 39 3 0.472943 226 6 0.359127 74 3 0.3265306 51 5 0.413095 100 5 0.3996273 290 6 0.485521 276 6 0.5462377 250 5 0.5464221 184 5 0.424149 118 5 0.396135 151 5 0.714286 27 3 0.588518 162 6 0.768908 208 6 0.432987 269 6 0.527470 234 6 0.393962 273 6 0.4408646 137 5 0.451385 223 6 0.565466 0.5051019 0.5724889 0.5571703 0.5722320 0.7323429 0.527409 6.2720e-01 0.5287596 0.6781617 0.658280 0.4612969 0.5056563 0.539196 0.451693 0.6002045 0.634676 0.5769526 0.4373479 0.671973 0.554979 0.4775051 0.664923 0.67238525 0.666411 0.6360947 0.4481449 0.5074496 0.577213 0.6138477 0.6032628 0.710854 0.6439106 0.635966 0.6270116 0.620464 0.700136 0.841685 0.5087012 0.6404867 0.5193350 0.4871583 0.5774925 3 0.5596634 0.5613819 -0.02238180 5 0.506060 0.442529 0.0635308 0.3710675 0.2856231 insignificant 1 1.00000 insignificant 0.632507 0.3916014 insignificant 1 1 insignificant 0.04332880 0.284746 lowCoverage 1 lowCoverage 0.5596634 0.685882 -0.1224227 5 0.506060 0.528950 -0.0228894 2.9528e-01 5.5949e-09 weaklyHypometh 1.0000e+00 2.7975e-06 weaklyHypometh 5.3592e-01 1.8092e-03 weaklyHypometh 1.0000e+00 4.5229e-01 insignificant -0.0761643 3.0097e-01 lowCoverage 1.0000e+00 lowCoverage 0.559663 0.4551056 0.0695009 6 0.506060 0.442324 0.0637360 1.5785e-02 3.5267e-01 weaklyHypermeth 7.8927e-01 1.000000 insignificant 1.0534e-01 3.4745e-02 inconclusive 1.000000 1.000000 insignificant 0.0475715 2.2518e-01 lowCoverage 1.0000000 lowCoverage 0.5613819 0.685882 -0.1212789 5 0.442529 0.528950 -0.0864202 8.0353e-01 8.5796e-06 weaklyHypometh 1.0000e+00 2.8599e-03 weaklyHypometh 8.7393e-01 2.1500e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.1194931 1.1567e-01 lowCoverage 1.0000e+00 lowCoverage 0.5613819 0.4551056 0.1056418 5 0.442529 0.442324 0.00020525 9.3172e-03 6.0090e-01 weaklyHypermeth 4.2351e-01 1.000000 insignificant 1.3854e-01 0.24981772 insignificant 1.0000000 1.00000 insignificant 0.0042427 8.9973e-01 lowCoverage 1.000000 lowCoverage 0.685882 0.4551056 0.2049618 5 0.528950 0.442324 0.0866255 3.7391e-06 8.0913e-01 hypermethylated 1.8695e-03 1.0000e+00 hypermethylated 4.6923e-03 5.2029e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.1237358 1.0418e-01 insignificant 1.0000e+00 insignificant chr13 100060750 100061750 44433 A2LD1 ENSG00000134864 0.733353 155 5 0.831795 43 3 0.8198810 77 5 0.775921 133 5 0.795455 47 5 0.8384497 119 5 0.776176 55 5 0.4611111 35 3 0.3733333 28 4 0.8158730 44 5 0.782525 104 5 0.6611111 42 5 0.692556 61 5 NA 0 0 0.7700000 67 5 0.7943553 79 5 0.666061 32 4 0.7956421 93 5 0.842364 75 5 0.8249297 94 5 0.750476 29 4 0.894286 35 4 0.766234 56 5 0.96666667 14 1 0.903636 65 5 0.852143 54 4 0.813636 26 2 0.8583333 19 1 0.792857 28 1 0.7946678 92 5 0.724026 74 5 0.7465511 164 5 0.6009524 37 4 0.645693 68 5 0.714286 60 5 0.831025 49 5 0.650000 24 1 0.744805 73 5 0.819057 170 5 0.804945 125 5 0.762777 132 5 0.7823755 169 5 0.793183 150 5 0.750436 0.7773996 0.7988411 0.7802652 0.7889783 0.8033791 0.759474 5.4120e-01 0.4601770 0.8176710 0.813051 0.6733038 0.6982922 NA 0.717109 0.8135152 0.609386 0.8052701 0.8280337 0.783621 0.708302 0.8872314 0.772141 0.93215339 0.912523 0.8340076 0.8020917 0.7883481 0.770860 0.8274978 0.7416964 0.720437 0.4920354 0.577460 0.6952074 0.751995 0.623894 0.664406 0.8082777 0.7888028 0.7800807 0.7670220 0.7684701 1 0.7642805 0.7926829 -0.03250819 5 0.762715 0.794264 -0.0315483 0.9716007 0.1438068 insignificant 1 1.00000 insignificant 0.996932 0.0142778 weaklyHypometh 1 1 insignificant -0.08243885 0.029751 lowCoverage 1 lowCoverage 0.7642805 0.662379 0.0984213 5 0.762715 0.700401 0.0623142 5.1932e-05 7.8913e-01 weaklyHypermeth 1.1803e-03 1.0000e+00 weaklyHypermeth 2.8525e-02 6.0962e-01 weaklyHypermeth 4.6763e-01 1.0000e+00 insignificant 0.0417272 3.6744e-01 lowCoverage 1.0000e+00 lowCoverage 0.764281 0.7962466 -0.0270017 5 0.762715 0.791018 -0.0283022 9.0934e-01 2.4855e-01 insignificant 1.0000e+00 1.000000 insignificant 8.0735e-01 2.5883e-01 insignificant 1.000000 1.000000 insignificant -0.0529468 9.8198e-02 lowCoverage 1.0000000 lowCoverage 0.7926829 0.662379 0.1309513 5 0.794264 0.700401 0.0938625 1.2458e-04 9.3241e-01 weaklyHypermeth 3.1144e-03 1.0000e+00 weaklyHypermeth 2.7507e-03 9.5984e-01 weaklyHypermeth 7.2388e-02 1.0000e+00 weaklyHypermeth 0.1241660 1.2683e-02 lowCoverage 4.0337e-01 lowCoverage 0.7926829 0.7962466 0.0076520 5 0.794264 0.791018 0.00324609 5.4741e-01 6.8758e-01 insignificant 1.0000e+00 1.000000 insignificant 1.4744e-01 0.94863197 insignificant 1.0000000 1.00000 insignificant 0.0294920 2.2816e-01 lowCoverage 1.000000 lowCoverage 0.662379 0.7962466 -0.1225834 5 0.700401 0.791018 -0.0906164 8.6007e-01 1.4556e-03 weaklyHypometh 1.0000e+00 3.7323e-02 weaklyHypometh 7.3706e-01 6.5933e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0946740 3.7756e-02 lowCoverage 9.2087e-01 lowCoverage chr13 108217150 108218150 44534 MYO16 ENSG00000041515 0.745760 112 5 0.775833 49 4 0.7304029 67 5 0.795652 94 5 0.863636 43 5 0.7915966 112 5 0.785000 54 5 0.5713131 46 5 0.8203297 46 4 0.8539683 70 5 0.773333 108 5 0.7841880 52 5 0.804762 62 4 NA 0 0 0.8128571 72 4 0.8861111 37 5 0.726061 60 5 0.8247114 78 5 0.843512 58 5 0.7916727 136 5 0.750000 9 0 0.788889 32 4 0.718954 88 5 0.61111111 17 2 0.925000 30 4 0.719584 117 5 0.966667 19 2 1.0000000 28 2 0.894286 37 4 0.8433789 104 5 0.812271 90 5 0.7757841 130 5 0.8468421 61 4 0.686874 74 5 0.701035 91 5 0.815171 53 5 0.792121 34 4 0.682261 104 5 0.785241 125 5 0.803004 160 5 0.851481 115 5 0.8516746 130 5 0.839653 123 5 0.763516 0.7971154 0.7642998 0.8155309 0.8365385 0.8245394 0.840224 5.8974e-01 0.8408178 0.8787546 0.826362 0.8080621 0.8434066 NA 0.859203 0.9074519 0.813462 0.8363616 0.8487538 0.804407 0.680756 0.8557692 0.749340 0.66956483 0.884615 0.7584840 0.9339879 1.0000000 0.908379 0.8882689 0.8407748 0.784147 0.8132338 0.673698 0.7505773 0.777120 0.795367 0.745019 0.8456101 0.8138516 0.9026709 0.8849949 0.9045834 2 0.7979351 0.8074180 -0.00412016 5 0.789930 0.793836 -0.0039059 0.6830345 0.4351220 insignificant 1 1.00000 insignificant 0.970463 0.1260163 insignificant 1 1 insignificant -0.02870244 0.441472 lowCoverage 1 lowCoverage 0.7979351 0.741007 0.0588238 5 0.789930 0.729489 0.0604414 1.8408e-03 9.9638e-01 weaklyHypermeth 3.2294e-02 1.0000e+00 weaklyHypermeth 1.2265e-02 9.0776e-01 weaklyHypermeth 2.2299e-01 1.0000e+00 insignificant 0.0344073 3.3345e-01 lowCoverage 1.0000e+00 lowCoverage 0.797935 0.8162328 -0.0375416 5 0.789930 0.822706 -0.0327753 9.2961e-01 7.9308e-02 insignificant 1.0000e+00 1.000000 insignificant 9.2846e-01 5.5095e-02 insignificant 1.000000 1.000000 insignificant -0.0377529 8.6512e-02 lowCoverage 1.0000000 lowCoverage 0.8074180 0.741007 0.0667651 5 0.793836 0.729489 0.0643473 9.2098e-03 9.9444e-01 weaklyHypermeth 1.4855e-01 1.0000e+00 insignificant 2.8642e-02 9.9603e-01 weaklyHypermeth 4.9382e-01 1.0000e+00 insignificant 0.0631097 1.7451e-01 lowCoverage 1.0000e+00 lowCoverage 0.8074180 0.8162328 -0.0352596 5 0.793836 0.822706 -0.02886943 9.0377e-01 2.1158e-01 insignificant 1.0000e+00 1.000000 insignificant 7.0899e-01 0.54098136 insignificant 1.0000000 1.00000 insignificant -0.0090505 8.0288e-01 lowCoverage 1.000000 lowCoverage 0.741007 0.8162328 -0.1007972 5 0.729489 0.822706 -0.0932167 9.9947e-01 1.6907e-03 weaklyHypometh 1.0000e+00 4.2268e-02 weaklyHypometh 9.9084e-01 1.2573e-02 weaklyHypometh 1.0000e+00 3.5924e-01 insignificant -0.0721602 6.2528e-02 lowCoverage 1.0000e+00 lowCoverage chr13 109155450 109156450 44567 ENSG00000222110 0.814976 336 8 0.893652 202 6 0.8505952 43 4 0.749090 275 8 0.925926 39 6 0.7751180 405 8 0.836364 31 4 0.9215554 143 6 0.8434829 58 6 0.8943191 41 4 0.942119 244 6 0.8333333 9 0 0.940497 102 6 0.9705882 52 6 0.9220238 43 4 NA 0 0 0.000000 10 1 0.6715078 384 8 0.950036 303 7 0.8037706 296 7 0.948413 63 6 0.894737 21 1 0.909624 165 7 1.00000000 31 5 0.681648 101 1 0.795691 316 8 0.846264 99 6 0.8800000 18 2 0.941382 310 6 0.6126001 309 7 0.950361 364 8 0.8499172 308 8 0.9351595 197 6 0.816824 244 6 0.669752 247 8 0.500000 32 2 0.716433 108 6 0.840842 363 8 0.708076 229 8 0.827554 441 8 0.898457 302 8 0.8817316 182 6 0.757064 263 8 0.880542 0.8778351 0.8625992 0.9218691 0.8148148 0.9039341 0.746465 8.8976e-01 0.6984509 0.8654275 0.918856 0.7179756 0.9488663 0.926471 0.860615 NA NA 0.7588419 0.9462166 0.897862 0.931217 0.7912228 0.882031 1.00000000 0.749663 0.8955913 0.8421551 0.7476265 0.911626 0.9573812 0.8819195 0.930583 0.8639743 0.881008 0.6000000 NA 0.618406 0.732894 0.8384707 0.8478919 0.8098519 0.8836883 0.8488859 0 0.8975042 0.9200000 -0.01830348 6 0.735474 0.742345 -0.0068707 0.9868589 0.1701672 insignificant 1 1.00000 insignificant 0.944347 0.3937018 insignificant 1 1 insignificant -0.04138003 0.488297 insignificant 1 insignificant 0.8975042 0.815966 0.0931091 6 0.735474 0.701280 0.0341947 2.5188e-02 9.8553e-01 weaklyHypermeth 3.2712e-01 1.0000e+00 insignificant 1.3534e-01 9.8625e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0713379 3.8623e-01 insignificant 1.0000e+00 insignificant 0.898102 0.8783593 0.0270742 6 0.809022 0.773062 0.0359596 2.9087e-01 6.2697e-01 insignificant 1.0000e+00 1.000000 insignificant 4.5078e-02 8.9171e-01 weaklyHypermeth 1.000000 1.000000 insignificant 0.0032633 9.5781e-01 insignificant 1.0000000 insignificant 0.9200000 0.815966 0.1040337 6 0.742345 0.701280 0.0410654 7.6629e-03 9.9868e-01 weaklyHypermeth 1.3212e-01 1.0000e+00 insignificant 4.7917e-02 9.9960e-01 weaklyHypermeth 7.4870e-01 1.0000e+00 insignificant 0.1127179 1.4965e-01 insignificant 1.0000e+00 insignificant 0.9204383 0.8783593 0.0389507 7 0.816579 0.773062 0.04351740 7.7067e-03 9.3783e-01 weaklyHypermeth 3.6699e-01 1.000000 insignificant 2.5853e-02 0.96970115 weaklyHypermeth 1.0000000 1.00000 insignificant 0.0446433 3.8291e-01 insignificant 1.000000 insignificant 0.816653 0.8783593 -0.0647563 7 0.771408 0.773062 -0.0016546 9.5263e-01 1.6413e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7188e-01 5.1046e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0680746 3.7415e-01 insignificant 1.0000e+00 insignificant chr13 109193950 109194950 44568 ENSG00000222110 0.874354 248 5 0.670513 146 5 0.5066667 35 4 0.858486 261 5 0.615584 21 2 0.8486493 339 5 0.761905 43 2 0.8656487 113 4 0.7400000 31 4 0.7992776 60 4 0.806614 268 5 0.8750000 19 1 0.725000 61 4 0.7339683 31 4 0.7380952 42 4 0.8928571 20 2 NA 0 0 0.5844039 514 5 0.862245 100 1 0.8452072 420 5 0.716176 36 2 1.000000 5 0 0.880303 74 5 0.86666667 38 2 0.797619 43 2 0.833954 180 5 0.548007 79 4 0.6600000 23 3 0.747475 197 5 0.7617346 201 5 0.753399 252 5 0.8553944 387 5 0.5862009 125 5 0.000000 32 1 0.795833 274 4 NA 0 0 0.385594 168 5 0.582006 327 5 0.783219 324 5 0.655806 267 5 0.641441 338 5 0.7220200 211 4 0.763091 302 5 0.692761 0.3043870 0.5322917 0.5679495 0.3745942 0.6340795 0.672619 6.4773e-01 0.5156250 0.1862058 0.621756 0.3945313 0.0312500 0.408333 0.446429 0.5783189 NA 0.3185825 0.7330995 0.653959 0.711167 0.9868560 0.698311 0.61250000 0.292411 0.5436589 0.4843750 0.4843750 0.553819 0.3202652 0.5072505 0.583949 0.0204327 0.000000 0.0312500 NA 0.086250 0.000000 0.3586912 0.2495285 0.2294414 0.2485695 0.4126557 1 0.7192349 0.7260726 -0.00798253 5 0.775567 0.791115 -0.0155478 0.9294727 0.1347873 insignificant 1 1.00000 insignificant 0.849995 0.1828043 insignificant 1 1 insignificant -0.01640418 0.700241 lowCoverage 1 lowCoverage 0.7191336 0.421622 0.2669088 5 0.738162 0.493102 0.2450599 1.9790e-08 7.2366e-01 hypermethylated 8.9953e-07 1.0000e+00 hypermethylated 3.4585e-03 9.6068e-01 weaklyHypermeth 9.1012e-02 1.0000e+00 weaklyHypermeth 0.2987296 8.9398e-02 lowCoverage 1.0000e+00 lowCoverage 0.719292 0.4604716 0.1167915 5 0.785794 0.707550 0.0782437 2.4640e-03 3.8218e-01 weaklyHypermeth 1.7887e-01 1.000000 insignificant 3.1011e-02 8.2420e-01 weaklyHypermeth 1.000000 1.000000 insignificant 0.0555412 1.6990e-01 lowCoverage 1.0000000 lowCoverage 0.7257105 0.421622 0.2764748 5 0.756301 0.493102 0.2631991 5.8422e-08 9.8933e-01 hypermethylated 2.4343e-06 1.0000e+00 hypermethylated 2.4309e-03 9.9479e-01 weaklyHypermeth 6.7524e-02 1.0000e+00 weaklyHypermeth 0.3151338 7.7475e-02 lowCoverage 1.0000e+00 lowCoverage 0.7260093 0.4604716 0.1247998 5 0.807561 0.707550 0.10001070 1.6575e-03 9.8322e-01 weaklyHypermeth 1.1050e-01 1.000000 insignificant 5.7828e-03 0.99918341 weaklyHypermeth 0.3987709 1.00000 insignificant 0.0719454 1.2404e-01 lowCoverage 1.000000 lowCoverage 0.422535 0.4604716 -0.1597612 5 0.591722 0.707550 -0.1158282 9.5365e-01 6.3892e-04 weaklyHypometh 1.0000e+00 1.8255e-02 weaklyHypometh 9.3782e-01 3.0902e-02 weaklyHypometh 1.0000e+00 6.7002e-01 insignificant -0.2431883 1.4503e-01 lowCoverage 1.0000e+00 lowCoverage chr13 109194950 109195950 44569 ENSG00000222110 0.956073 627 10 0.895614 206 10 0.5837768 120 10 0.954802 629 10 1.000000 30 0 0.9593817 452 10 0.934403 183 10 0.9088678 201 10 0.9141414 147 10 0.9725253 169 10 0.899875 349 10 0.8875000 76 7 0.900646 256 10 1.0000000 3 0 0.9811779 255 10 1.0000000 18 0 0.899206 76 10 0.8914110 834 10 0.961430 184 10 0.9795227 370 10 0.992857 79 5 0.971242 166 10 0.951386 380 10 0.94500000 86 10 0.994737 127 10 0.968632 325 10 0.974026 85 10 0.9690476 56 7 0.977272 209 10 0.9827717 355 10 0.953436 332 10 0.9541219 518 10 0.9635789 228 10 0.949437 206 10 0.000000 3 0 0.967500 107 10 0.902360 123 10 0.963911 438 10 0.980030 719 10 0.892584 576 10 0.959804 863 10 0.9625081 634 10 0.958076 775 10 0.945513 0.9022823 0.6528101 0.9461855 1.0000000 0.9574839 0.945971 9.5867e-01 0.9664830 0.9743985 0.953703 0.9731405 0.9720224 NA 0.974841 1.0000000 0.888561 0.9701284 0.9689167 0.970524 0.989374 0.9686166 0.957274 0.94297521 0.992171 0.9612315 0.9858323 0.9579890 0.972248 0.9789106 0.9603560 0.948169 0.9597984 0.943882 NA 0.972779 0.946383 0.966392 0.9818577 0.9659210 0.9544863 0.9616823 0.9507397 5 0.9492278 0.9643120 -0.01420672 10 0.905560 0.968801 -0.0632417 0.9936543 0.0133735 weaklyHypometh 1 1.00000 insignificant 0.999905 0.0090136 weaklyHypometh 1 1 insignificant -0.04552640 0.037678 weaklyHypometh 1 insignificant 0.9492768 0.955656 -0.0082099 10 0.912824 0.881293 0.0315311 7.1307e-01 4.8590e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.6690e-01 4.0973e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.1328864 4.4240e-01 insignificant 1.0000e+00 insignificant 0.949392 0.9632745 -0.0123881 10 0.915976 0.886906 0.0290700 9.6521e-01 5.0538e-01 insignificant 1.0000e+00 1.000000 insignificant 4.5572e-01 9.5956e-01 insignificant 1.000000 1.000000 insignificant -0.0265828 3.0140e-01 insignificant 1.0000000 insignificant 0.9643120 0.958182 0.0053927 10 0.968801 0.921401 0.0474004 6.6359e-01 7.3165e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.9227e-01 9.6830e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.1784128 3.1164e-01 insignificant 1.0000e+00 insignificant 0.9642330 0.9632332 0.0020388 10 0.965965 0.876625 0.08934008 3.9562e-01 7.1901e-01 insignificant 1.0000e+00 1.000000 insignificant 3.3207e-03 0.99993096 weaklyHypermeth 0.3018786 1.00000 insignificant 0.0189436 2.8458e-01 insignificant 1.000000 insignificant 0.955616 0.9632745 -0.0052899 10 0.871401 0.886906 -0.0155053 3.3532e-01 4.8352e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.2444e-01 8.9200e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.1594692 3.6184e-01 insignificant 1.0000e+00 insignificant chr13 109449950 109450950 44576 ENSG00000201161 0.917159 165 5 0.815268 97 5 0.8428571 74 4 0.955613 164 3 0.746429 44 5 0.9298714 204 5 0.666667 33 3 0.8190152 142 5 0.8696970 110 5 0.8166667 40 3 0.794744 121 5 0.7333333 17 0 0.791179 82 3 0.8103896 78 5 0.8612903 97 3 0.3333333 9 0 0.555556 9 0 0.7443646 143 3 0.837759 110 3 0.8442536 156 5 0.733333 34 3 0.780000 49 3 0.701307 112 3 0.83333333 46 5 0.523077 42 3 0.869472 150 5 0.819378 107 4 0.8355556 52 3 0.872294 70 3 0.8456217 112 5 0.883976 121 5 0.8819028 147 5 0.7826801 152 5 0.981818 37 3 1.000000 184 3 1.000000 1 0 0.822092 90 5 0.863519 105 5 0.946345 84 3 0.839847 88 3 0.600438 92 3 0.8923077 119 3 0.902648 136 5 0.929260 0.8916817 0.7417582 0.9279157 0.9024725 0.9230328 0.769231 8.6290e-01 0.8400673 0.9066952 0.832108 0.8860399 0.7614377 0.872905 0.932313 0.3289013 0.562520 0.8995974 0.9465824 0.894048 0.988604 0.7455840 0.831602 0.93874644 0.861275 0.8968738 0.8468301 0.8919278 0.951918 0.8130645 0.8830464 0.914120 0.7913776 0.968143 0.9976541 NA 0.888827 0.802176 0.9102768 0.8422702 0.8238577 0.8235810 0.8858543 3 0.8659631 0.8656430 -0.00576576 5 0.830043 0.850382 -0.0203392 0.7260660 0.3956596 insignificant 1 1.00000 insignificant 0.603065 0.3838220 insignificant 1 1 insignificant -0.01399874 0.749376 lowCoverage 1 lowCoverage 0.8659631 0.885764 -0.0235182 5 0.830043 0.867370 -0.0373271 9.3319e-01 2.4026e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9426e-01 1.1223e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.1240792 3.0550e-02 lowCoverage 8.0487e-01 lowCoverage 0.865963 0.8516378 0.0227157 3 0.830043 0.822991 0.0070516 2.7116e-01 8.5168e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 5.8272e-01 4.7354e-01 lowCoverage 1.000000 1.000000 lowCoverage -0.0520448 4.7717e-01 lowCoverage 1.0000000 lowCoverage 0.8656430 0.885764 -0.0178881 5 0.850382 0.867370 -0.0169879 8.8278e-01 3.8677e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8375e-01 1.6129e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.1100804 5.0029e-02 lowCoverage 9.3753e-01 lowCoverage 0.8656430 0.8516378 0.0238499 3 0.850382 0.822991 0.02739072 3.2261e-01 9.4134e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 5.8044e-01 0.38875226 lowCoverage 1.0000000 1.00000 lowCoverage -0.0380461 5.9784e-01 lowCoverage 1.000000 lowCoverage 0.885764 0.8516378 0.0424100 3 0.867370 0.822991 0.0443786 1.8623e-01 9.4204e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 3.5936e-01 9.1521e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0720343 3.5704e-01 lowCoverage 1.0000e+00 lowCoverage chr13 109923150 109924150 44594 ENSG00000210514 0.924504 123 7 0.913711 283 7 0.9171641 215 7 0.964286 26 3 0.906095 150 7 0.9062457 147 7 0.936325 257 7 0.8939544 232 7 0.9454581 190 7 0.9604701 204 7 0.935826 225 7 0.9143385 197 7 0.948508 261 7 NA 0 0 0.9469979 218 7 0.9517439 161 7 0.905564 159 7 0.9523810 58 6 0.927947 230 7 0.9596607 174 7 0.895934 175 7 0.916667 16 0 0.866114 199 7 0.89803855 90 7 1.000000 6 0 0.944343 255 7 0.884599 113 7 0.9461698 109 7 0.876985 186 7 0.9666281 265 7 0.948681 233 7 0.9361800 188 6 0.9512583 246 7 0.916285 190 7 0.983333 112 3 0.950000 40 4 0.941394 101 7 0.991890 221 6 0.983923 135 7 0.969048 143 7 0.976190 34 6 0.9690476 109 6 0.845351 52 6 0.928924 0.9144893 0.9092501 0.9659091 0.8856133 0.9037124 0.940569 9.1824e-01 0.9395367 0.9560440 0.950584 0.9145536 0.9446935 NA 0.951081 0.9401902 0.896868 0.9545455 0.9361409 0.950967 0.896648 0.9123377 0.877570 0.88918883 0.979733 0.9363787 0.8971373 0.9570393 0.865039 0.9627026 0.9564248 0.930492 0.9456180 0.890870 0.9611499 0.949675 0.962864 0.988941 0.9824065 0.9675325 0.9675325 0.9648268 0.8085962 2 0.9270655 0.9231608 0.00382585 7 0.931175 0.920415 0.0107599 0.0506487 0.7059372 insignificant 1 1.00000 insignificant 0.092668 0.5698433 insignificant 1 1 insignificant 0.00880579 0.497510 insignificant 1 insignificant 0.9270655 0.947253 -0.0208144 6 0.931175 0.947061 -0.0158861 8.7418e-01 3.8402e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9841e-01 6.0601e-03 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0235261 9.9975e-02 insignificant 1.0000e+00 insignificant 0.927066 0.9513742 -0.0222408 6 0.931175 0.959899 -0.0287240 9.2462e-01 1.6320e-03 weaklyHypometh 1.0000e+00 0.326400 insignificant 9.8693e-01 4.5380e-04 weaklyHypometh 1.000000 0.126982 insignificant -0.0165447 5.6349e-01 insignificant 1.0000000 insignificant 0.9231608 0.947253 -0.0233037 6 0.920415 0.947061 -0.0266460 9.7639e-01 2.0512e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9918e-01 5.1236e-03 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0323318 6.6946e-02 insignificant 1.0000e+00 insignificant 0.9231608 0.9513742 -0.0268908 6 0.920415 0.959899 -0.03948395 9.2981e-01 8.2935e-05 weaklyHypometh 1.0000e+00 0.041991 weaklyHypometh 9.8628e-01 0.00051782 weaklyHypometh 1.0000000 0.25891 insignificant -0.0253505 4.0940e-01 insignificant 1.000000 insignificant 0.947253 0.9513742 -0.0045727 6 0.947061 0.959899 -0.0128379 6.5926e-01 4.4105e-03 weaklyHypometh 1.0000e+00 9.1886e-02 weaklyHypometh 7.0582e-01 1.5602e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0069814 8.1450e-01 insignificant 1.0000e+00 insignificant chr13 109977650 109978650 44601 ENSG00000210514 0.870679 129 4 0.826013 270 7 0.8655220 76 7 0.857102 108 5 0.772962 94 7 0.8304523 191 4 0.813625 78 7 0.8365329 131 7 0.8561370 99 7 0.8296251 115 7 0.905205 169 7 0.7138128 95 6 0.884549 155 7 0.9285714 10 1 0.8290424 78 7 0.7333333 16 1 0.705159 37 5 0.7673016 111 3 0.880480 197 7 0.8457244 128 5 0.859524 61 6 0.644643 25 4 0.812349 95 7 0.85714286 42 4 0.865988 129 3 0.882210 188 7 0.900000 24 4 0.9266667 21 2 0.903276 175 5 0.9151272 204 7 0.849915 207 7 0.8939755 168 6 0.8322299 186 7 0.739680 173 7 0.623256 99 4 0.745817 81 2 0.862287 95 5 0.811757 178 7 0.740689 142 4 0.688510 186 6 0.670761 103 4 0.6797619 84 4 0.697989 80 4 0.763386 0.7754062 0.8222854 0.7437224 0.5544938 0.8228523 0.674020 7.6244e-01 0.7363407 0.7487374 0.912879 0.6047980 0.8320707 0.932900 0.683566 0.3131313 0.818305 0.4534343 0.8380682 0.714604 0.900000 0.6030303 0.635860 0.76515152 0.830884 0.8299297 0.8232323 0.9060606 0.746474 0.8846801 0.8219038 0.860513 0.7686311 0.528069 0.5313601 0.493584 0.784169 0.865220 0.6453726 0.4268500 0.5013255 0.6570707 0.5640892 2 0.8167906 0.8661182 -0.05075780 7 0.837169 0.878012 -0.0408436 0.9595792 0.0210113 weaklyHypometh 1 1.00000 insignificant 0.841356 0.2209112 insignificant 1 1 insignificant -0.03164327 0.229995 insignificant 1 insignificant 0.8167906 0.751232 0.0481856 7 0.837169 0.799406 0.0377626 2.9464e-01 7.0368e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.9699e-01 5.7340e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0584204 1.6848e-01 insignificant 1.0000e+00 insignificant 0.816791 0.5781513 0.1825795 4 0.837169 0.730064 0.1071047 9.0332e-10 8.1637e-01 lowCoverage 4.5166e-07 1.000000 lowCoverage 2.6107e-04 7.7796e-01 lowCoverage 0.087022 1.000000 lowCoverage 0.1320494 2.6174e-06 lowCoverage 0.0026174 lowCoverage 0.8661182 0.751232 0.1008691 7 0.878012 0.799406 0.0786063 4.3556e-02 7.9257e-01 weaklyHypermeth 5.4445e-01 1.0000e+00 insignificant 3.6394e-01 7.6164e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0900637 5.7372e-02 insignificant 1.0000e+00 insignificant 0.8661182 0.5781513 0.2412352 4 0.878012 0.730064 0.14794829 1.1104e-10 8.2644e-01 lowCoverage 3.7012e-08 1.000000 lowCoverage 3.8921e-04 0.88570693 lowCoverage 0.0778410 1.00000 lowCoverage 0.1636927 8.4041e-06 lowCoverage 0.006335 lowCoverage 0.751232 0.5781513 0.1239547 4 0.799406 0.730064 0.0693420 1.2163e-03 9.3260e-01 lowCoverage 3.0407e-01 1.0000e+00 lowCoverage 3.0791e-02 9.0198e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0736290 9.4187e-02 lowCoverage 1.0000e+00 lowCoverage chr13 112096950 112097950 44625 C13orf28 ENSG00000153498 0.851242 127 5 0.988889 49 5 0.8000000 11 0 0.883143 119 5 0.942857 21 3 0.7650917 148 5 0.816667 18 1 0.8618182 76 5 0.8269231 62 5 0.9668173 72 5 0.931295 145 5 0.6600000 17 2 0.737438 148 5 0.8000000 30 5 0.7250000 52 5 0.6666667 5 0 0.875000 7 0 0.6537802 304 5 0.861818 57 5 0.9461905 86 5 0.885714 47 3 0.679902 141 5 0.885833 68 5 0.80000000 14 1 0.838889 69 5 0.859832 82 5 0.894801 78 5 0.3333333 6 0 0.697619 80 5 0.8779221 87 5 0.740952 82 5 0.8989538 141 5 0.5695010 81 5 0.174476 59 5 0.666667 71 3 0.232500 56 4 0.220043 67 5 0.516071 96 5 0.630815 96 5 0.747398 110 5 0.671497 112 5 0.5947619 101 5 0.727339 148 5 0.858481 0.9942529 0.7241379 0.8554100 0.9162562 0.7442546 0.783046 8.2045e-01 0.8017241 0.9631203 0.952277 0.6172414 0.7128345 0.784483 0.637931 0.7597919 0.847584 0.6002675 0.8213166 0.932635 0.934113 0.6505631 0.837284 0.94137931 0.837644 0.8283251 0.8674934 0.4270537 0.787685 0.8544559 0.6923645 0.886994 0.6152833 0.153856 0.5695985 0.216595 0.263226 0.512659 0.5605178 0.7007770 0.6572425 0.4919951 0.6944254 0 0.8088803 0.8268156 -0.02437532 5 0.839671 0.695356 0.1443151 0.9845706 0.2099094 insignificant 1 1.00000 insignificant 0.624706 0.8370779 insignificant 1 1 insignificant 0.04521918 0.396979 lowCoverage 1 lowCoverage 0.8087572 0.411628 0.3870837 5 0.807605 0.418953 0.3886523 1.9616e-18 1.0000e+00 hypermethylated 1.6346e-16 1.0000e+00 hypermethylated 3.5816e-09 1.0000e+00 hypermethylated 5.1166e-07 1.0000e+00 hypermethylated 0.4314889 3.3441e-03 lowCoverage 1.6733e-01 lowCoverage 0.808757 0.6790123 0.1262506 5 0.807605 0.679955 0.1276495 6.8834e-04 9.9981e-01 weaklyHypermeth 9.8335e-02 1.000000 weaklyHypermeth 1.6006e-05 1.0000e+00 weaklyHypermeth 0.016006 1.000000 weaklyHypermeth 0.1536696 1.8884e-03 lowCoverage 0.1766408 lowCoverage 0.8286674 0.411628 0.4136334 5 0.834427 0.418953 0.4154742 5.9716e-14 1.0000e+00 hypermethylated 4.3418e-12 1.0000e+00 hypermethylated 4.3873e-07 1.0000e+00 hypermethylated 3.6561e-05 1.0000e+00 hypermethylated 0.3862698 4.3339e-03 lowCoverage 2.0638e-01 lowCoverage 0.8286674 0.6790123 0.1556417 5 0.834427 0.679955 0.15447138 5.6490e-05 1.0000e+00 weaklyHypermeth 7.0612e-03 1.000000 weaklyHypermeth 1.3000e-05 0.99999995 weaklyHypermeth 0.0064999 1.00000 weaklyHypermeth 0.1084505 6.6171e-02 lowCoverage 1.000000 lowCoverage 0.411628 0.6790123 -0.2463298 5 0.418953 0.679955 -0.2610028 9.9908e-01 2.5955e-07 hypomethylated 1.0000e+00 1.7303e-05 hypomethylated 9.9965e-01 1.2201e-03 weaklyHypometh 1.0000e+00 6.6167e-02 weaklyHypometh -0.2778193 2.2251e-02 lowCoverage 6.7428e-01 lowCoverage chr13 112841350 112842350 44639 ENSG00000218655 0.923873 378 5 0.894050 189 5 0.8593651 119 5 0.885742 215 5 0.937582 54 5 0.8894924 408 5 0.819444 109 5 0.8711957 152 5 0.8315814 140 5 0.9221479 121 5 0.922992 186 5 0.9133399 62 5 0.918392 187 5 0.9444444 14 2 0.9334928 135 5 0.8888889 40 3 0.804444 45 3 0.8160717 252 5 0.938526 135 5 0.9286496 281 5 0.938095 60 3 0.834252 98 5 0.931011 231 5 0.86718531 99 5 0.917857 48 5 0.947611 247 5 0.867262 92 5 0.9593103 71 5 0.899904 186 5 0.8988871 275 5 0.911167 255 5 0.9282672 360 5 0.8195385 215 5 0.578344 89 3 0.500000 109 2 0.807992 35 3 0.835974 125 5 0.847697 268 5 0.967634 255 5 0.868787 285 5 0.923453 201 5 0.8224790 272 5 0.849952 238 5 0.910394 0.8613315 0.8329697 0.8642319 0.9211727 0.8726358 0.806877 8.8431e-01 0.8047536 0.8883360 0.916713 0.8658020 0.9348105 0.939171 0.912232 0.8735104 0.814097 0.7922677 0.9037586 0.920520 0.928257 0.7662162 0.921372 0.91246727 0.866897 0.9430719 0.8425530 0.9501747 0.913633 0.8940782 0.9076636 0.914795 0.7865735 0.353774 0.6895498 0.779388 0.785079 0.834543 0.9499680 0.8509781 0.8916981 0.7918558 0.8246093 3 0.8876474 0.9094955 -0.02396847 5 0.894592 0.914861 -0.0202695 0.9805366 0.0363372 weaklyHypometh 1 1.00000 insignificant 0.975379 0.0280502 weaklyHypometh 1 1 insignificant -0.01621503 0.277660 lowCoverage 1 lowCoverage 0.8876474 0.743163 0.1317648 5 0.894592 0.792193 0.1023987 8.3639e-06 4.1175e-01 weaklyHypermeth 2.2605e-04 1.0000e+00 weaklyHypermeth 5.9313e-03 1.5369e-01 weaklyHypermeth 1.2894e-01 1.0000e+00 insignificant 0.1605947 4.8304e-02 lowCoverage 1.0000e+00 lowCoverage 0.887647 0.8800959 0.0101763 5 0.894592 0.884419 0.0101724 2.1134e-01 4.6175e-01 insignificant 1.0000e+00 1.000000 insignificant 4.8181e-01 7.2392e-01 insignificant 1.000000 1.000000 insignificant 0.0057247 8.4580e-01 lowCoverage 1.0000000 lowCoverage 0.9094955 0.743163 0.1640548 5 0.914861 0.792193 0.1226682 1.2096e-04 7.2673e-01 weaklyHypermeth 3.1016e-03 1.0000e+00 weaklyHypermeth 1.2588e-02 4.5973e-01 weaklyHypermeth 2.5175e-01 1.0000e+00 insignificant 0.1768097 3.5059e-02 lowCoverage 7.4639e-01 lowCoverage 0.9094955 0.8800959 0.0397854 5 0.914861 0.884419 0.03044193 3.3569e-02 7.8860e-01 weaklyHypermeth 1.0000e+00 1.000000 insignificant 1.8883e-01 0.87539826 insignificant 1.0000000 1.00000 insignificant 0.0219398 4.7031e-01 lowCoverage 1.000000 lowCoverage 0.743163 0.8800959 -0.1189430 5 0.792193 0.884419 -0.0922263 8.6610e-01 8.8089e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 4.5303e-01 7.6931e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.1548700 5.6464e-02 lowCoverage 1.0000e+00 lowCoverage chr13 113102050 113103050 44649 GRTP1 ENSG00000139835 0.866970 414 15 0.750509 375 16 0.7818213 199 15 0.831821 209 11 0.820106 160 15 0.8477365 617 15 0.767802 230 16 0.7679406 306 15 0.7721205 198 15 0.8421567 267 15 0.843128 581 16 0.8043304 146 12 0.807813 319 15 0.6809524 68 7 0.8152073 261 15 0.7183586 113 12 0.799851 652 14 0.8496278 256 14 0.806202 272 13 0.8456390 556 15 0.690384 213 9 0.833210 155 7 0.815304 296 15 0.83469036 204 12 0.930423 90 8 0.816739 389 15 0.733663 277 13 0.8577473 198 12 0.785788 183 13 0.8152527 421 15 0.824415 355 16 0.8507566 659 15 0.5167232 306 16 0.813753 259 13 0.626462 220 11 0.577512 108 9 0.718432 327 13 0.557973 462 16 0.838277 391 13 0.886842 401 13 0.809290 291 13 0.8234932 348 13 0.871423 395 13 0.851378 0.7121757 0.7497708 0.8300130 0.8214665 0.8546872 0.786728 7.9595e-01 0.7756720 0.8456714 0.812805 0.7740866 0.8113790 0.769953 0.813149 0.7836527 0.778976 0.8618208 0.8349351 0.841676 0.823637 0.8051158 0.772298 0.87241283 0.944038 0.8220253 0.8003896 0.8378292 0.875775 0.8163336 0.7629105 0.841282 0.6383257 0.771324 0.6646745 0.634263 0.745671 0.706262 0.8528948 0.8746121 0.8443539 0.8470799 0.8579481 8 0.8130344 0.8260111 -0.00574953 15 0.813208 0.782478 0.0307305 0.4488140 0.2388000 insignificant 1 1.00000 insignificant 0.871497 0.1061679 insignificant 1 1 insignificant -0.01469324 0.481186 insignificant 1 insignificant 0.8131460 0.674004 0.1438137 15 0.824861 0.630585 0.1942765 2.7193e-21 9.9998e-01 weaklyHypermeth 2.7193e-19 1.0000e+00 weaklyHypermeth 1.0785e-08 9.9999e-01 weaklyHypermeth 1.3482e-06 1.0000e+00 weaklyHypermeth 0.1658622 1.3778e-02 weaklyHypermeth 4.9207e-01 insignificant 0.813055 0.8613699 -0.0469828 13 0.814559 0.864040 -0.0494812 9.9047e-01 1.4461e-05 weaklyHypometh 1.0000e+00 0.014461 weaklyHypometh 9.9831e-01 1.2274e-04 weaklyHypometh 1.000000 0.061372 weaklyHypometh -0.0448602 3.4752e-02 weaklyHypometh 1.0000000 insignificant 0.8266317 0.673603 0.1489485 15 0.795591 0.597396 0.1981948 6.0785e-14 9.9989e-01 weaklyHypermeth 4.3418e-12 1.0000e+00 weaklyHypermeth 1.9655e-08 1.0000e+00 weaklyHypermeth 2.1839e-06 1.0000e+00 weaklyHypermeth 0.1805554 8.6826e-03 weaklyHypermeth 3.3395e-01 insignificant 0.8267211 0.8614458 -0.0417000 13 0.798124 0.871593 -0.07346976 9.1756e-01 8.3981e-05 weaklyHypometh 1.0000e+00 0.041991 weaklyHypometh 8.5324e-01 0.03251501 weaklyHypometh 1.0000000 1.00000 insignificant -0.0301670 2.0613e-01 insignificant 1.000000 insignificant 0.673810 0.8614458 -0.1785939 13 0.602807 0.871593 -0.2687865 1.0000e+00 4.7783e-11 weaklyHypometh 1.0000e+00 5.9729e-09 weaklyHypometh 1.0000e+00 2.3759e-08 weaklyHypometh 1.0000e+00 5.9398e-06 weaklyHypometh -0.2107224 4.5405e-03 weaklyHypometh 2.2702e-01 insignificant chr13 113112750 113113750 44650 GRTP1 ENSG00000139835 0.889988 344 10 0.803503 190 10 0.8045711 94 10 0.921097 344 10 0.963043 107 6 0.9428527 314 10 0.862238 180 10 0.9497718 126 10 0.8825000 73 9 0.9865967 90 7 0.942147 250 10 0.9141667 60 7 0.646368 78 7 0.8553225 69 7 0.9777434 127 7 1.0000000 37 4 1.000000 1 0 0.7866579 373 10 0.874784 251 10 0.9601436 232 10 0.909091 83 9 0.850885 177 8 0.906227 115 10 0.93939394 56 6 0.843619 585 10 0.918827 217 10 0.922444 125 8 0.8095238 22 3 0.886383 171 10 0.8985202 242 10 0.767714 248 10 0.9418998 246 10 0.2141205 221 10 0.181541 269 10 0.027066 292 5 0.194024 196 6 0.075092 156 8 0.094598 329 10 0.918216 242 10 0.816682 162 10 0.930565 201 10 0.8826341 298 10 0.878249 204 10 0.927705 0.8429558 0.8041600 0.8867646 0.8902813 0.8879844 0.905354 9.2280e-01 0.8019118 0.9777184 0.913830 0.8172549 0.8154477 0.844779 0.974077 0.9994770 NA 0.7264189 0.8491406 0.931465 1.000000 0.7788483 0.797005 0.97823911 0.792785 0.8637411 0.9474574 0.9116901 0.962668 0.8117252 0.8553299 0.890257 0.0305215 0.057765 0.0584313 0.144468 0.015546 0.043227 0.8773776 0.7286670 0.8844920 0.8265814 0.8110977 3 0.8870581 0.8835886 -0.00118020 10 0.844502 0.880850 -0.0363478 0.8352720 0.3459928 insignificant 1 1.00000 insignificant 0.917283 0.6256304 insignificant 1 1 insignificant 0.01529734 0.547855 insignificant 1 insignificant 0.8867528 0.106703 0.7700317 10 0.805627 0.146403 0.6592242 3.3298e-103 1.0000e+00 hypermethylated 3.3298e-100 1.0000e+00 hypermethylated 5.9007e-26 1.0000e+00 hypermethylated 5.9007e-23 1.0000e+00 hypermethylated 0.7671012 2.9642e-09 hypermethylated 1.4821e-06 hypermethylated 0.888253 0.8690154 0.0228325 10 0.909794 0.898838 0.0109563 2.4563e-01 4.3059e-01 insignificant 1.0000e+00 1.000000 insignificant 7.1348e-02 8.2272e-01 insignificant 1.000000 1.000000 insignificant 0.0129054 6.5243e-01 insignificant 1.0000000 insignificant 0.8832309 0.106630 0.7726730 10 0.862519 0.135141 0.7273774 1.7089e-75 1.0000e+00 hypermethylated 1.7089e-72 1.0000e+00 hypermethylated 1.1683e-20 1.0000e+00 hypermethylated 1.1683e-17 1.0000e+00 hypermethylated 0.7518038 3.7702e-08 hypermethylated 1.2567e-05 hypermethylated 0.8847845 0.8688969 0.0249851 10 0.910249 0.889641 0.02060844 6.4045e-02 9.0113e-01 insignificant 1.0000e+00 1.000000 insignificant 2.3332e-02 0.98910741 weaklyHypermeth 1.0000000 1.00000 insignificant -0.0023919 9.2665e-01 insignificant 1.000000 insignificant 0.105445 0.8687783 -0.7440333 10 0.132827 0.878605 -0.7457785 1.0000e+00 8.7656e-50 hypomethylated 1.0000e+00 8.7656e-47 hypomethylated 1.0000e+00 3.6515e-15 hypomethylated 1.0000e+00 3.6515e-12 hypomethylated -0.7541958 2.3397e-08 hypomethylated 2.3397e-05 hypomethylated chr13 113129250 113130250 44652 GRTP1 ENSG00000139835 0.861912 346 8 0.770731 201 8 0.7598605 68 7 0.830292 393 8 0.723958 58 4 0.8573902 373 8 0.694923 77 7 0.8031014 161 8 0.8582749 98 8 0.6737886 74 5 0.886214 240 8 0.6700000 25 2 0.743070 119 5 0.9013889 69 6 0.6468434 83 4 0.6071429 22 1 0.625000 5 0 0.8789104 273 8 0.752557 111 5 0.7836424 263 8 0.765212 56 5 0.900926 60 5 0.913283 115 8 0.85079365 56 8 0.898011 86 7 0.769459 249 8 0.793731 82 8 0.5915948 54 2 0.808127 109 8 0.8913260 236 8 0.686479 220 8 0.7683123 361 8 0.8036417 158 8 0.816067 105 8 0.843333 79 3 0.779762 54 3 0.638274 105 7 0.674522 225 8 0.750663 204 8 0.862532 313 8 0.792821 370 8 0.9270833 50 2 0.876629 319 8 0.879942 0.8825932 0.7871324 0.8491573 0.7586207 0.8708712 0.725857 8.5564e-01 0.8784488 0.8266434 0.909365 0.7565981 0.8322416 0.855172 0.827943 0.6785269 0.580987 0.8867921 0.8552650 0.879367 0.875862 0.9035247 0.918833 0.86502463 0.892649 0.8952940 0.8272827 0.8107721 0.797056 0.8987118 0.8905469 0.864833 0.8469321 0.840535 0.8890616 0.827258 0.899290 0.857194 0.7963532 0.8685056 0.8899759 0.9160920 0.8901860 1 0.8731197 0.8794537 -0.01644903 8 0.651669 0.722440 -0.0707710 0.8920522 0.4818331 insignificant 1 1.00000 insignificant 0.957987 0.2249619 insignificant 1 1 insignificant -0.03665454 0.302580 insignificant 1 insignificant 0.8731197 0.833333 0.0050498 8 0.651669 0.553607 0.0980624 4.9091e-01 9.6475e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.0869e-01 7.0642e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0071834 8.6041e-01 insignificant 1.0000e+00 insignificant 0.873650 0.9171975 -0.0197370 8 0.732003 0.744374 -0.0123714 9.2079e-01 2.7214e-01 insignificant 1.0000e+00 1.000000 insignificant 8.1077e-01 2.9679e-01 insignificant 1.000000 1.000000 insignificant -0.0754955 7.9358e-02 insignificant 1.0000000 insignificant 0.8794537 0.833333 0.0252166 8 0.722440 0.553607 0.1688334 1.0227e-01 9.9047e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.3395e-01 9.5091e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0438379 3.3868e-01 insignificant 1.0000e+00 insignificant 0.8809524 0.9171975 -0.0027131 8 0.766928 0.744374 0.02255372 7.0344e-01 5.8088e-01 insignificant 1.0000e+00 1.000000 insignificant 6.9481e-01 0.77479074 insignificant 1.0000000 1.00000 insignificant -0.0388410 3.7553e-01 insignificant 1.000000 insignificant 0.836791 0.9171975 -0.0320312 8 0.664328 0.744374 -0.0800463 7.7961e-01 3.5145e-02 weaklyHypometh 1.0000e+00 5.3251e-01 insignificant 6.1087e-01 2.5159e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0826789 1.0694e-01 insignificant 1.0000e+00 insignificant chr13 113349550 113350550 44654 TFDP1 ENSG00000198176 0.783074 488 18 0.679184 233 9 0.8983828 140 5 0.917950 311 18 0.710191 220 7 0.8478056 142 9 0.760704 215 5 0.8710635 280 19 0.8778499 128 5 0.7957372 146 7 0.892254 322 11 0.6057129 122 4 0.916806 308 17 0.7669271 41 1 0.9119187 214 5 0.7272119 152 4 0.804267 131 4 0.6114538 251 5 0.917228 502 19 0.8592910 451 17 0.794835 146 10 0.887978 141 8 0.859601 185 15 0.92975468 119 6 0.791099 219 8 0.842543 326 9 0.846729 286 18 0.9137701 49 4 0.908581 430 17 0.8676992 434 15 0.939481 402 18 0.9545785 318 16 0.5565452 330 14 0.591780 486 17 0.137500 107 6 0.706294 58 4 0.426979 127 7 0.658962 464 19 0.840975 150 10 0.742837 185 10 0.835140 209 8 0.4954955 45 1 0.321807 153 8 0.965107 0.8706823 0.9294915 0.9358695 0.9540960 0.9176408 0.733710 9.4148e-01 0.9220339 0.9261640 0.974705 0.4782082 0.9510020 0.529661 0.948263 0.9307293 0.861397 0.7194536 0.9192561 0.981095 0.961299 0.9720837 0.866021 0.93644068 0.888756 0.9182512 0.9033323 0.8813559 0.949148 0.9049839 0.9590610 0.975347 0.3892438 0.262712 0.5389266 0.474576 0.523251 0.525424 0.9693822 0.9412051 0.9735688 0.4617499 0.4367217 2 0.9127531 0.9328969 -0.01619532 11 0.780066 0.838921 -0.0588544 0.9998535 0.0106871 weaklyHypometh 1 0.97155 insignificant 0.999897 0.0911481 insignificant 1 1 insignificant -0.07030347 0.015275 weaklyHypometh 1 insignificant 0.9119917 0.417303 0.5036238 12 0.706490 0.545256 0.1612337 2.1430e-74 9.8512e-01 hypermethylated 1.0715e-71 1.0000e+00 hypermethylated 6.8045e-07 9.9406e-01 hypermethylated 5.2343e-05 1.0000e+00 hypermethylated 0.2947407 1.6293e-02 weaklyHypermeth 5.5443e-01 insignificant 0.914800 0.7789757 0.0995154 4 0.882463 0.752437 0.1300263 4.3114e-16 9.6555e-01 lowCoverage 4.3114e-13 1.000000 lowCoverage 2.3679e-01 8.7975e-01 lowCoverage 1.000000 1.000000 lowCoverage 0.1604997 1.9527e-01 insignificant 1.0000000 insignificant 0.9328749 0.417358 0.4330064 18 0.832477 0.570687 0.2617903 4.4054e-53 9.9802e-01 hypermethylated 2.2027e-50 1.0000e+00 hypermethylated 1.1925e-08 9.9961e-01 hypermethylated 1.4907e-06 1.0000e+00 hypermethylated 0.3650442 7.0663e-03 weaklyHypermeth 2.9443e-01 insignificant 0.9343401 0.7789757 0.1195531 6 0.907711 0.752437 0.15527466 1.2755e-12 9.8542e-01 weaklyHypermeth 1.2755e-09 1.000000 weaklyHypermeth 1.1411e-01 0.96341848 insignificant 1.0000000 1.00000 insignificant 0.2308032 8.7414e-02 insignificant 1.000000 insignificant 0.418217 0.7789757 -0.1888976 6 0.639707 0.752437 -0.1127297 4.2683e-01 8.2713e-10 weaklyHypometh 1.0000e+00 8.2713e-08 weaklyHypometh 9.9640e-01 2.4154e-02 weaklyHypometh 1.0000e+00 5.6172e-01 insignificant -0.1342409 3.4190e-01 insignificant 1.0000e+00 insignificant chr13 113766350 113767350 44660 FAM70B ENSG00000184497 0.870031 496 18 0.848942 260 18 0.8850543 153 10 0.917022 432 19 0.854804 121 10 0.9033758 472 19 0.822373 121 6 0.7057434 255 19 0.8716364 105 7 0.9278534 150 12 0.901867 506 18 0.8546898 55 4 0.822268 260 12 0.9197324 83 4 0.9034085 148 12 0.5744048 53 2 0.715278 856 5 0.8990489 508 15 0.890875 221 14 0.8403380 356 14 0.870514 207 18 0.761579 278 15 0.756721 223 16 0.76684110 159 14 0.850204 358 17 0.917925 306 19 0.857355 229 15 0.8931803 92 5 0.830218 197 15 0.9235157 308 17 0.903436 273 19 0.9310559 456 19 0.6709840 186 18 0.845122 279 18 0.593203 386 10 0.664242 79 6 0.538756 198 14 0.876945 308 18 0.759649 186 13 0.856109 439 19 0.926569 309 16 0.9354312 227 12 0.875519 396 18 0.868351 0.7063959 0.7898129 0.8683317 0.8240835 0.7953984 0.784371 8.0236e-01 0.8581729 0.8845238 0.825539 0.7683153 0.8202359 0.976086 0.863517 0.6441392 0.572969 0.8479828 0.8621448 0.723909 0.753591 0.8225733 0.784704 0.76204013 0.880849 0.8315089 0.8042334 0.7343697 0.764937 0.7945909 0.7955458 0.846261 0.7474287 0.722448 0.8123925 0.586888 0.729792 0.752819 0.7931718 0.8806693 0.8662574 0.9187528 0.7695964 4 0.8848485 0.8742301 0.00238391 15 0.714822 0.808222 -0.0934001 0.9651983 0.5150441 insignificant 1 1.00000 insignificant 0.920709 0.3861984 insignificant 1 1 insignificant -0.00877478 0.747396 insignificant 1 insignificant 0.8851845 0.782669 0.0887537 15 0.749305 0.583056 0.1662494 2.2278e-05 9.9968e-01 weaklyHypermeth 5.5995e-04 1.0000e+00 weaklyHypermeth 9.6954e-03 9.9998e-01 weaklyHypermeth 1.8395e-01 1.0000e+00 insignificant 0.1482287 4.3117e-02 weaklyHypermeth 9.7994e-01 insignificant 0.886664 0.8920308 0.0214383 13 0.876024 0.837577 0.0384475 2.8040e-01 3.3328e-01 insignificant 1.0000e+00 1.000000 insignificant 1.7567e-01 6.4035e-01 insignificant 1.000000 1.000000 insignificant -0.0242183 5.3386e-01 insignificant 1.0000000 insignificant 0.8742301 0.782123 0.0819970 18 0.808222 0.583056 0.2251668 9.7166e-05 9.9436e-01 weaklyHypermeth 2.5570e-03 1.0000e+00 weaklyHypermeth 2.4141e-04 9.9458e-01 weaklyHypermeth 9.8594e-03 1.0000e+00 weaklyHypermeth 0.1570035 3.5186e-02 weaklyHypermeth 7.4639e-01 insignificant 0.8764783 0.8920308 0.0075234 13 0.841967 0.837577 0.00439006 5.0375e-01 6.5418e-01 insignificant 1.0000e+00 1.000000 insignificant 2.3476e-01 0.67270963 insignificant 1.0000000 1.00000 insignificant -0.0154435 6.8555e-01 insignificant 1.000000 insignificant 0.785513 0.8914579 -0.0917254 13 0.715543 0.799505 -0.0839623 9.9156e-01 2.7581e-02 weaklyHypometh 1.0000e+00 4.4485e-01 insignificant 9.8219e-01 5.5422e-02 insignificant 1.0000e+00 9.8968e-01 insignificant -0.1724470 2.7543e-02 weaklyHypometh 7.4102e-01 insignificant chr13 113909350 113910350 44667 FAM70B ENSG00000184497 0.889292 103 11 0.903940 277 19 0.9417177 457 19 0.983796 83 11 0.933182 846 19 0.9259753 173 19 0.961008 824 19 0.9352572 207 19 0.9562581 433 19 0.9802613 410 19 0.941893 838 19 0.9609011 987 19 0.947138 359 19 NA 0 0 0.9437571 546 19 0.9345443 1072 19 0.943885 824 19 0.9946524 82 8 0.947983 540 19 0.9671053 114 15 0.936141 302 19 0.700000 18 0 0.905591 272 18 0.96015359 222 19 0.895833 20 0 0.895318 214 19 0.900520 132 17 0.9333914 363 19 0.911068 206 18 0.9550733 262 19 0.951047 193 19 0.9541353 182 19 0.9361540 262 18 0.956291 363 19 0.974804 426 19 0.980769 29 1 0.967581 440 19 0.952358 141 16 0.955742 98 9 0.933208 113 12 0.977778 35 0 0.9270833 50 4 0.909900 68 6 0.881236 0.8992337 0.9444281 0.9739746 0.9370019 0.9189128 0.961979 9.3439e-01 0.9540080 0.9744956 0.940606 0.9599992 0.9350518 NA 0.945151 0.9314329 0.940116 0.9948299 0.9439139 0.968407 0.931448 0.8567134 0.910124 0.95904480 0.927915 0.9143271 0.8939037 0.9244257 0.925704 0.9633084 0.9524407 0.962254 0.9399456 0.945140 0.9727220 0.965235 0.964841 0.939703 0.9483017 0.9163527 0.9565018 0.9453139 0.9066719 0 0.9432153 0.9287510 0.01560057 19 0.944875 0.928645 0.0162308 0.0073684 0.9918308 weaklyHypermeth 1 1.00000 insignificant 0.120174 0.9848173 insignificant 1 1 insignificant 0.03878674 0.088671 insignificant 1 insignificant 0.9432153 0.959061 -0.0168951 19 0.944875 0.962866 -0.0179906 9.9993e-01 2.8978e-03 weaklyHypometh 1.0000e+00 3.8800e-01 insignificant 9.9982e-01 2.0824e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0143501 1.2979e-01 insignificant 1.0000e+00 insignificant 0.943215 0.9368132 0.0063813 3 0.944875 0.943582 0.0012934 1.8413e-01 3.2019e-03 lowCoverage 1.0000e+00 0.400232 lowCoverage 9.9984e-01 7.1455e-05 lowCoverage 1.000000 0.061372 lowCoverage 0.0062341 6.5288e-01 insignificant 1.0000000 insignificant 0.9287510 0.959061 -0.0325838 19 0.928645 0.962866 -0.0342214 9.9988e-01 2.8693e-03 weaklyHypometh 1.0000e+00 5.7386e-01 insignificant 9.9911e-01 5.9663e-03 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0531368 2.6633e-02 weaklyHypometh 6.7865e-01 insignificant 0.9287510 0.9368132 -0.0107711 3 0.928645 0.943582 -0.01493738 9.0796e-01 5.4961e-03 lowCoverage 1.0000e+00 0.916021 lowCoverage 9.9959e-01 0.00098536 lowCoverage 1.0000000 0.32845 lowCoverage -0.0325527 1.8489e-01 insignificant 1.000000 insignificant 0.959061 0.9368132 0.0238143 3 0.962866 0.943582 0.0192840 2.6246e-01 1.3879e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.4300e-01 1.7885e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0205842 1.7677e-01 insignificant 1.0000e+00 insignificant chr13 114078350 114079350 44671 UPF3A ENSG00000169062 0.861111 66 6 0.830434 125 6 0.9214286 58 6 0.870833 54 6 0.909091 72 6 0.9134615 83 6 0.896368 113 6 0.8181090 80 6 0.7390110 59 6 0.6964286 49 6 0.811851 149 6 0.9503968 29 3 0.738095 56 6 0.5899621 44 3 0.9444444 48 6 0.8205128 39 3 0.480065 308 3 0.8112875 52 5 0.646062 63 6 0.8888889 54 3 0.916667 37 3 0.857143 18 1 0.779915 71 6 0.86067019 52 6 0.832954 118 6 0.799153 103 6 0.759259 54 6 0.6769841 21 3 0.819643 53 6 0.7743969 126 6 0.762527 130 6 0.6842262 57 6 0.7668034 88 6 0.632212 85 6 0.407337 88 6 0.375000 65 3 0.277961 61 4 0.761735 150 6 0.663807 89 6 0.857971 99 6 0.786158 108 6 0.9116162 38 3 0.778799 125 6 0.788779 0.6516247 0.8920792 0.8653465 0.8496850 0.8248286 0.850470 7.4835e-01 0.7873826 0.7561881 0.890073 0.9118537 0.7821782 0.835734 0.887789 0.8528029 0.832532 0.8128241 0.8441773 0.823102 0.876238 1.0000000 0.721630 0.95552412 0.765430 0.8718837 0.7176018 0.7479548 0.912871 0.8596896 0.7786406 0.888119 0.8330664 0.613887 0.4909044 0.571782 0.515465 0.739927 0.8197437 0.8148084 0.7727409 0.8610111 0.8808484 2 0.8432230 0.8833333 0.00218773 6 0.682742 0.636825 0.0459166 0.5569385 0.8602526 insignificant 1 1.00000 insignificant 0.723752 0.8013681 insignificant 1 1 insignificant 0.01326393 0.704015 insignificant 1 insignificant 0.8432230 0.536313 0.2844499 6 0.682742 0.497426 0.1853152 1.7296e-12 9.9947e-01 hypermethylated 1.0810e-10 1.0000e+00 hypermethylated 1.0907e-06 9.9947e-01 hypermethylated 7.7906e-05 1.0000e+00 hypermethylated 0.2700508 2.4116e-02 weaklyHypermeth 7.0928e-01 insignificant 0.845768 0.8322440 0.0213957 6 0.822177 0.694601 0.1275762 2.5042e-03 6.8237e-01 weaklyHypermeth 1.7887e-01 1.000000 insignificant 2.6410e-01 7.2607e-01 insignificant 1.000000 1.000000 insignificant 0.0072217 8.8949e-01 insignificant 1.0000000 insignificant 0.8833333 0.536313 0.3334043 6 0.636825 0.497426 0.1393986 8.8505e-08 9.9865e-01 hypermethylated 3.4040e-06 1.0000e+00 hypermethylated 5.3713e-05 9.9985e-01 hypermethylated 2.9841e-03 1.0000e+00 hypermethylated 0.2567869 2.9752e-02 weaklyHypermeth 6.9287e-01 insignificant 0.8886228 0.8322440 0.0389308 6 0.796031 0.694601 0.10143045 6.9909e-02 9.4475e-01 insignificant 1.0000e+00 1.000000 insignificant 4.0914e-01 0.93880301 insignificant 1.0000000 1.00000 insignificant -0.0060422 9.0085e-01 insignificant 1.000000 insignificant 0.539326 0.8322440 -0.2775086 6 0.621783 0.694601 -0.0728178 9.5585e-01 3.6016e-04 hypomethylated 1.0000e+00 1.1618e-02 hypomethylated 9.7920e-01 4.5851e-04 hypomethylated 1.0000e+00 3.5825e-02 hypomethylated -0.2628291 2.8159e-02 weaklyHypometh 7.4102e-01 insignificant chr14 20857950 20858950 44712 RPGRIP1 ENSG00000092200 0.769290 164 8 0.775568 137 8 0.6591012 84 7 0.586377 193 8 0.694048 38 4 0.7543676 251 8 0.462438 80 8 0.8323867 159 8 0.7655556 80 6 0.8683333 60 6 0.910230 293 8 0.7500000 28 4 0.620000 86 8 0.5916667 40 3 0.6127897 99 7 0.9523810 13 0 0.666667 9 0 0.6614196 160 9 0.681022 128 7 0.7453143 167 8 0.711688 56 4 0.795833 43 6 0.703878 102 8 0.76865079 52 8 0.793900 57 6 0.790653 170 8 0.557857 87 6 0.7777778 25 2 0.727182 111 8 0.8418711 122 8 0.813839 147 8 0.7590840 238 8 0.6354649 143 8 0.566593 90 7 0.682269 154 8 0.857143 9 0 0.637153 54 6 0.710083 144 7 0.652732 157 8 0.721021 206 7 0.607930 203 8 0.9030220 80 7 0.751432 198 8 0.779152 0.6607471 0.7604815 0.7902550 0.5556573 0.7751914 0.626186 7.5117e-01 0.7877493 0.7856125 0.838547 0.8368598 0.7420357 0.825499 0.726357 0.7893881 0.635980 0.7549961 0.8008706 0.796008 0.693344 0.7903622 0.814647 0.65483652 0.778499 0.8461858 0.6576516 0.8704904 0.765750 0.8348139 0.8082430 0.790077 0.7059068 0.695276 0.7296896 0.798769 0.602255 0.686215 0.8069878 0.7872996 0.8243634 0.8877109 0.8664708 0 0.7787572 0.7958678 -0.01951081 8 0.725570 0.765249 -0.0396795 0.9946734 0.4731778 insignificant 1 1.00000 insignificant 0.991757 0.4716404 insignificant 1 1 insignificant -0.03557010 0.305824 insignificant 1 insignificant 0.7800089 0.691919 0.0939238 8 0.735945 0.631829 0.1041162 1.5324e-05 9.6254e-01 weaklyHypermeth 4.0325e-04 1.0000e+00 weaklyHypermeth 5.7145e-03 8.8043e-01 weaklyHypermeth 1.2699e-01 1.0000e+00 insignificant 0.0364967 4.6838e-01 insignificant 1.0000e+00 insignificant 0.778272 0.8459716 -0.0478830 8 0.689649 0.648126 0.0415227 6.9469e-01 1.1719e-01 insignificant 1.0000e+00 1.000000 insignificant 7.1887e-01 1.7005e-01 insignificant 1.000000 1.000000 insignificant -0.0092796 8.7616e-01 insignificant 1.0000000 insignificant 0.7954925 0.691919 0.1097567 8 0.742555 0.631829 0.1107259 6.5915e-05 9.9065e-01 weaklyHypermeth 1.8310e-03 1.0000e+00 weaklyHypermeth 1.6284e-02 9.9435e-01 weaklyHypermeth 3.1930e-01 1.0000e+00 insignificant 0.0720668 1.5390e-01 insignificant 1.0000e+00 insignificant 0.7953411 0.8459716 -0.0294563 8 0.728666 0.648126 0.08053978 6.0426e-01 5.5545e-01 insignificant 1.0000e+00 1.000000 insignificant 6.5894e-01 0.74588658 insignificant 1.0000000 1.00000 insignificant 0.0262905 6.5094e-01 insignificant 1.000000 insignificant 0.693086 0.8476190 -0.1429588 8 0.689268 0.661592 0.0276758 9.9989e-01 1.5588e-07 weaklyHypometh 1.0000e+00 1.1134e-05 weaklyHypometh 9.5969e-01 2.9391e-03 weaklyHypometh 1.0000e+00 1.2779e-01 insignificant -0.0457763 4.9968e-01 insignificant 1.0000e+00 insignificant chr14 21082050 21083050 44717 SALL2 ENSG00000165821 0.815747 129 7 0.763759 146 7 0.7743934 162 7 0.807778 107 7 0.871805 153 7 0.7187199 219 7 0.728646 131 7 0.8017429 148 7 0.7570707 109 5 0.7556453 88 5 0.911042 303 7 0.8239098 70 3 0.859140 117 7 0.7074830 34 5 0.8682881 137 7 0.6271486 133 5 0.907917 100 3 0.7945688 153 7 0.869207 169 7 0.8867883 160 7 0.883612 90 5 0.741667 17 1 0.830044 128 7 0.80255573 109 5 0.750000 26 2 0.861372 192 7 0.963614 70 5 0.8953008 75 5 0.840894 138 7 0.8927616 172 7 0.833309 170 7 0.8392983 220 7 0.6310762 186 5 0.841537 143 7 0.750751 139 5 1.000000 4 0 0.720843 145 7 0.815506 183 7 0.847111 165 7 0.877807 176 7 0.767628 84 7 0.9153439 93 6 0.790685 110 7 0.827065 0.7252100 0.8204784 0.8847469 0.8955154 0.8094526 0.802528 9.0770e-01 0.8461269 0.8790338 0.900342 0.8612208 0.9152583 0.838483 0.863477 0.8325249 0.938697 0.9178124 0.8999036 0.899944 0.888645 0.8252768 0.896229 0.81527907 0.884121 0.8977758 0.9664593 0.8796092 0.872822 0.9035851 0.8875581 0.862774 0.7755486 0.844900 0.8978498 0.920504 0.819514 0.851841 0.8536497 0.8907394 0.8831076 0.9356157 0.8693529 3 0.8656069 0.8699360 0.00186611 7 0.803713 0.842556 -0.0388426 0.8234438 0.4174269 insignificant 1 1.00000 insignificant 0.909932 0.2361160 insignificant 1 1 insignificant -0.04199577 0.098584 insignificant 1 insignificant 0.8656069 0.840000 0.0392852 7 0.803713 0.662536 0.1411770 2.7534e-02 7.7109e-01 weaklyHypermeth 3.5300e-01 1.0000e+00 insignificant 1.9559e-01 7.8330e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0092544 8.6935e-01 insignificant 1.0000e+00 insignificant 0.865607 0.8757962 -0.0337426 7 0.803713 0.849078 -0.0453642 7.6124e-01 5.7403e-02 insignificant 1.0000e+00 1.000000 insignificant 9.0629e-01 3.6019e-02 weaklyHypometh 1.000000 1.000000 insignificant -0.0371750 2.8096e-01 insignificant 1.0000000 insignificant 0.8699360 0.840000 0.0341304 7 0.842556 0.662536 0.1800196 9.4201e-03 8.6057e-01 weaklyHypermeth 1.4937e-01 1.0000e+00 insignificant 1.9890e-02 7.8913e-01 weaklyHypermeth 3.6834e-01 1.0000e+00 insignificant 0.0512501 3.8060e-01 insignificant 1.0000e+00 insignificant 0.8699360 0.8757962 -0.0389043 7 0.842556 0.849078 -0.00652166 5.8725e-01 2.8393e-01 insignificant 1.0000e+00 1.000000 insignificant 5.9769e-01 0.23414652 insignificant 1.0000000 1.00000 insignificant 0.0048207 8.8628e-01 insignificant 1.000000 insignificant 0.840000 0.8757962 -0.0480984 7 0.662536 0.849078 -0.1865413 9.9987e-01 4.4749e-02 weaklyHypometh 1.0000e+00 6.2151e-01 insignificant 9.9581e-01 8.3843e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0464294 4.4863e-01 insignificant 1.0000e+00 insignificant chr14 21095550 21096550 44718 SALL2 ENSG00000165821 0.758359 141 8 0.754706 126 6 0.6969017 76 6 0.744595 127 6 0.669841 87 6 0.6571829 170 6 0.521429 68 6 0.6209476 121 6 0.7500000 61 6 0.6010965 92 6 0.602046 217 6 0.4166667 25 2 0.795274 105 6 0.6533613 61 6 0.6552707 78 6 0.6785714 30 2 0.831224 108 5 0.7426134 172 7 0.752938 80 5 0.6986462 192 6 0.797619 30 3 0.832011 48 5 0.663981 112 6 0.98809524 23 2 0.690615 46 5 0.853496 156 6 0.604926 90 6 0.6439394 30 2 0.736311 89 5 0.7398103 151 6 0.712810 126 6 0.6402916 192 6 0.6809169 117 6 0.791667 99 6 0.596850 176 6 0.766667 24 3 0.542947 95 6 0.749491 140 6 0.823154 99 6 0.739418 150 6 0.855291 134 6 0.8412775 68 6 0.717001 179 6 0.776979 0.7046143 0.7071736 0.8072435 0.7196637 0.7653610 0.543860 7.4668e-01 0.7847222 0.8134234 0.768298 0.4835526 0.8250847 0.792425 0.680106 0.6903195 0.863520 0.7768603 0.7416553 0.786460 0.877741 0.8494674 0.693157 0.92584969 0.731173 0.8492618 0.6676258 0.7925638 0.743916 0.8369337 0.7493276 0.772448 0.7147528 0.803289 0.7176957 0.813158 0.656134 0.745280 0.8327613 0.8530702 0.8522086 0.8538293 0.7666371 2 0.7459055 0.7566331 -0.01366603 6 0.709724 0.739933 -0.0302091 0.9579614 0.3051240 insignificant 1 1.00000 insignificant 0.987524 0.0325956 weaklyHypometh 1 1 insignificant -0.06190868 0.121903 lowCoverage 1 lowCoverage 0.7459055 0.715822 0.0317575 6 0.709724 0.707532 0.0021921 2.3103e-01 9.2986e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.5011e-01 8.5744e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0080063 8.6692e-01 insignificant 1.0000e+00 insignificant 0.745905 0.8047619 -0.0595214 6 0.709724 0.778965 -0.0692407 9.9883e-01 4.5341e-03 weaklyHypometh 1.0000e+00 0.468675 insignificant 9.9659e-01 1.3732e-02 weaklyHypometh 1.000000 1.000000 insignificant -0.1151448 9.3699e-03 weaklyHypometh 0.5230911 insignificant 0.7566331 0.715822 0.0457129 6 0.739933 0.707532 0.0324012 9.5092e-02 9.9564e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.0361e-01 9.9105e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0539023 3.1965e-01 lowCoverage 1.0000e+00 lowCoverage 0.7566331 0.8047619 -0.0475257 6 0.739933 0.778965 -0.03903158 9.1261e-01 3.0098e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 7.5493e-01 0.37181281 insignificant 1.0000000 1.00000 insignificant -0.0532361 2.3056e-01 lowCoverage 1.000000 lowCoverage 0.715822 0.8047619 -0.0868537 6 0.707532 0.778965 -0.0714328 9.7793e-01 1.3149e-03 weaklyHypometh 1.0000e+00 3.5068e-02 weaklyHypometh 9.9388e-01 2.7053e-02 weaklyHypometh 1.0000e+00 6.0118e-01 insignificant -0.1071385 6.0811e-02 insignificant 1.0000e+00 insignificant chr14 22186650 22187650 44748 ENSG00000172611 0.762181 154 6 0.752062 235 6 0.6578054 99 6 0.813869 158 6 0.597289 117 6 0.7063447 197 6 0.596561 141 6 0.6983162 172 6 0.5220874 80 6 0.6157895 120 6 0.750142 211 6 0.7731481 63 6 0.770740 103 6 0.7106061 65 6 0.7497120 100 6 0.6694444 104 6 0.710524 878 5 0.7567970 109 6 0.734400 93 6 0.7115014 139 6 0.609606 54 6 0.561851 71 6 0.715873 115 6 0.63924964 74 6 0.830004 83 6 0.815935 190 6 0.729495 104 6 0.7888749 100 7 0.743983 122 6 0.7551143 165 6 0.775721 148 6 0.7698803 240 6 0.6353669 150 6 0.696558 125 6 0.640332 112 6 0.508333 28 4 0.567094 88 6 0.673283 136 6 0.754371 148 6 0.568413 133 6 0.727655 145 6 0.6879371 72 6 0.712092 186 6 0.770231 0.7124658 0.6673604 0.7880644 0.5938995 0.6942991 0.703956 6.9065e-01 0.6133896 0.7280786 0.755797 0.7620192 0.7369591 0.724068 0.751111 0.6873397 0.706082 0.7153842 0.7008086 0.700404 0.662508 0.6528263 0.712515 0.74821937 0.832389 0.7883996 0.7293369 0.7811590 0.751861 0.7590236 0.7688240 0.769924 0.6375257 0.651486 0.6214757 0.522596 0.559640 0.672349 0.7599535 0.6866097 0.7335103 0.6980269 0.7267628 6 0.7118035 0.7489768 -0.04330166 6 0.686990 0.729002 -0.0420120 0.9956678 0.0010130 weaklyHypometh 1 0.25326 insignificant 0.887338 0.0240190 weaklyHypometh 1 1 insignificant -0.02499958 0.400510 insignificant 1 insignificant 0.7118035 0.632238 0.0776417 6 0.686990 0.684439 0.0025516 7.1732e-05 9.9112e-01 weaklyHypermeth 1.5941e-03 1.0000e+00 weaklyHypermeth 2.1712e-04 9.9667e-01 weaklyHypermeth 9.8693e-03 1.0000e+00 weaklyHypermeth 0.0828047 3.4604e-02 weaklyHypermeth 8.6510e-01 insignificant 0.711803 0.7412281 -0.0279388 6 0.686990 0.616972 0.0700181 5.5972e-01 3.8946e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 5.2734e-01 8.5152e-02 insignificant 1.000000 1.000000 insignificant 0.0128725 7.3389e-01 insignificant 1.0000000 insignificant 0.7489768 0.632238 0.1210535 6 0.729002 0.684439 0.0445636 1.2027e-08 9.9089e-01 weaklyHypermeth 5.4666e-07 1.0000e+00 weaklyHypermeth 6.3924e-06 9.8962e-01 weaklyHypermeth 4.5660e-04 1.0000e+00 weaklyHypermeth 0.1078042 1.3945e-02 weaklyHypermeth 4.2259e-01 insignificant 0.7489768 0.7412281 0.0185824 6 0.729002 0.616972 0.11203005 5.7551e-02 8.5170e-01 insignificant 1.0000e+00 1.000000 insignificant 1.6773e-01 0.70725036 insignificant 1.0000000 1.00000 insignificant 0.0378721 3.7231e-01 insignificant 1.000000 insignificant 0.632238 0.7412281 -0.0997232 6 0.684439 0.616972 0.0674665 9.8250e-01 8.7943e-05 weaklyHypometh 1.0000e+00 3.6643e-03 weaklyHypometh 9.6367e-01 4.6572e-04 weaklyHypometh 1.0000e+00 3.5825e-02 weaklyHypometh -0.0699322 1.4139e-01 insignificant 1.0000e+00 insignificant chr14 22190950 22191950 44750 ENSG00000172611 0.647993 114 3 0.639614 91 5 0.5657609 52 3 0.434567 105 3 0.715789 50 4 0.6586380 100 5 0.620000 57 4 0.6526455 62 5 0.5714286 36 4 0.6991209 34 4 0.658939 115 5 0.8000000 21 2 0.700191 60 5 0.6171429 40 4 0.6600830 50 5 0.8472222 25 2 1.000000 21 2 0.5009000 104 3 0.711970 55 5 0.6262338 65 5 0.744444 16 1 0.791667 15 0 0.548889 54 3 0.69272727 33 4 0.655682 44 4 0.710808 74 5 0.590842 30 3 0.6238095 25 3 0.639216 60 4 0.6349650 60 5 0.713333 57 4 0.6162798 75 4 0.5677249 96 5 0.545055 45 3 0.585198 62 5 0.666667 6 0 0.584982 58 5 0.501905 78 5 0.602602 92 4 0.535229 79 4 0.631429 83 4 0.7888889 42 3 0.784533 81 4 0.593143 0.6747403 0.6306581 0.4259248 0.7069214 0.6488290 0.557078 6.7852e-01 0.5381605 0.6895981 0.691833 0.7616438 0.6387888 0.630137 0.613082 0.7587519 0.881059 0.5283220 0.7363014 0.673101 0.650685 0.8515982 0.569406 0.60211706 0.618369 0.6658657 0.7092428 0.7420091 0.631614 0.7407798 0.6643836 0.769121 0.5700370 0.563902 0.6475457 0.617965 0.573285 0.564579 0.6118599 0.6362292 0.6144814 0.6461187 0.7123344 1 0.6364360 0.6611418 -0.03067931 3 0.638986 0.658732 -0.0197461 0.8592893 0.2394192 lowCoverage 1 1.00000 lowCoverage 0.594258 0.4935429 lowCoverage 1 1 lowCoverage 0.00285670 0.932639 lowCoverage 1 lowCoverage 0.6364360 0.562319 0.0646640 5 0.638986 0.559466 0.0795199 6.7269e-04 9.6662e-01 weaklyHypermeth 1.2692e-02 1.0000e+00 weaklyHypermeth 3.8861e-03 9.9476e-01 weaklyHypermeth 9.7152e-02 1.0000e+00 weaklyHypermeth 0.0911567 1.7187e-02 lowCoverage 5.5443e-01 lowCoverage 0.636436 0.6578249 -0.0063925 4 0.638986 0.635202 0.0037841 7.1445e-01 6.9164e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 6.1307e-01 7.8515e-01 lowCoverage 1.000000 1.000000 lowCoverage -0.0021246 9.7161e-01 lowCoverage 1.0000000 lowCoverage 0.6611418 0.562319 0.0923599 3 0.658732 0.559466 0.0992660 8.1793e-03 9.9831e-01 lowCoverage 1.3863e-01 1.0000e+00 lowCoverage 1.2063e-01 9.9249e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0883000 1.1534e-02 lowCoverage 3.8446e-01 lowCoverage 0.6611418 0.6578249 0.0287998 3 0.658732 0.635202 0.02353022 4.2821e-01 8.6460e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 3.7789e-01 0.76608878 lowCoverage 1.0000000 1.00000 lowCoverage -0.0049813 9.3051e-01 lowCoverage 1.000000 lowCoverage 0.562319 0.6578249 -0.0617484 4 0.559466 0.635202 -0.0757358 9.7410e-01 3.1266e-02 lowCoverage 1.0000e+00 4.9022e-01 lowCoverage 9.9265e-01 4.8732e-02 lowCoverage 1.0000e+00 8.8603e-01 lowCoverage -0.0932813 1.4737e-01 lowCoverage 1.0000e+00 lowCoverage chr14 22318150 22319150 44756 OXA1L ENSG00000155463 0.571753 435 9 0.574950 219 9 0.6256880 114 8 0.698164 330 9 0.727548 92 9 0.5439743 316 9 0.498157 110 9 0.6317481 137 8 0.6009921 75 8 0.7116162 84 6 0.676205 287 9 0.4303030 36 3 0.701794 142 9 0.6704545 78 8 0.6268326 104 9 0.6406250 45 6 0.733333 63 5 0.5645665 425 11 0.517764 177 8 0.6412329 269 8 0.629604 77 6 0.754335 53 5 0.677254 226 9 0.51282912 109 8 0.620979 120 6 0.647024 226 9 0.708568 113 8 0.6190476 46 5 0.688995 151 8 0.6056064 212 9 0.552377 206 8 0.7353932 268 8 0.5746794 173 9 0.554131 150 7 0.694410 233 9 0.470833 30 5 0.424722 121 8 0.485938 236 9 0.638854 369 9 0.642767 359 9 0.730918 352 9 0.6872610 287 9 0.623287 328 9 0.692162 0.6767560 0.6169961 0.7161669 0.7155619 0.7429183 0.680123 7.0972e-01 0.6070292 0.7438999 0.719437 0.5859375 0.7785410 0.774609 0.638367 0.6584522 0.691628 0.6132979 0.6839423 0.696955 0.777320 0.7303848 0.719320 0.58600766 0.646516 0.6779254 0.6780961 0.6965976 0.686538 0.6783556 0.6985456 0.753541 0.5917667 0.642929 0.6671484 0.538237 0.598718 0.639448 0.7048855 0.7709361 0.7497690 0.7218748 0.7308027 4 0.6710006 0.6646375 0.00644207 9 0.579625 0.585425 -0.0058008 0.6144089 0.6288105 insignificant 1 1.00000 insignificant 0.794692 0.4278786 insignificant 1 1 insignificant -0.02661589 0.343506 insignificant 1 insignificant 0.6714812 0.618240 0.0696676 9 0.590414 0.570690 0.0197242 1.1146e-03 9.9813e-01 weaklyHypermeth 1.9904e-02 1.0000e+00 weaklyHypermeth 2.6297e-02 9.9923e-01 weaklyHypermeth 4.3947e-01 1.0000e+00 insignificant 0.0852662 8.7364e-02 insignificant 1.0000e+00 insignificant 0.671194 0.6820059 -0.0265515 9 0.617515 0.685424 -0.0679089 9.8152e-01 9.3203e-02 insignificant 1.0000e+00 1.000000 insignificant 9.8826e-01 2.5038e-01 insignificant 1.000000 1.000000 insignificant -0.0452324 1.1828e-01 insignificant 1.0000000 insignificant 0.6640798 0.618240 0.0556123 9 0.555813 0.570690 -0.0148770 1.2895e-02 8.2574e-01 weaklyHypermeth 1.9246e-01 1.0000e+00 insignificant 7.9774e-02 9.8729e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.1118821 3.5827e-02 weaklyHypermeth 7.4639e-01 insignificant 0.6662959 0.6820059 -0.0403979 9 0.625491 0.685424 -0.05993361 9.9500e-01 1.3844e-01 insignificant 1.0000e+00 1.000000 insignificant 9.6747e-01 0.41389453 insignificant 1.0000000 1.00000 insignificant -0.0186165 5.2609e-01 insignificant 1.000000 insignificant 0.617428 0.6818182 -0.0976275 9 0.499138 0.659210 -0.1600715 9.9994e-01 4.0469e-04 weaklyHypometh 1.0000e+00 1.2647e-02 weaklyHypometh 9.9998e-01 3.3310e-03 weaklyHypometh 1.0000e+00 1.3019e-01 insignificant -0.1304986 1.9744e-02 weaklyHypometh 6.5676e-01 insignificant chr14 22362650 22363650 44760 ENSG00000215306 0.656647 518 20 0.545569 385 20 0.4812402 160 14 0.709587 464 20 0.746602 192 16 0.6663957 669 19 0.522366 215 19 0.5988907 288 20 0.5330299 181 19 0.6908730 171 19 0.700992 474 20 0.5091226 152 15 0.715796 295 17 0.6666667 87 14 0.6792841 266 20 0.6333333 116 12 0.596074 152 12 0.6038127 514 23 0.683819 276 20 0.6927832 513 20 0.680028 124 13 0.731707 139 12 0.755044 270 20 0.71583522 104 10 0.709856 309 17 0.673654 361 20 0.537776 148 14 0.4922078 94 8 0.668640 282 19 0.6632205 341 20 0.675111 344 20 0.6594201 592 19 0.6549267 294 20 0.598877 301 20 0.531525 297 15 0.648898 180 12 0.606698 208 19 0.575340 397 20 0.671739 471 20 0.664296 550 20 0.704354 432 20 0.7047776 310 20 0.710430 511 20 0.716761 0.6257660 0.5501974 0.7486346 0.7501829 0.7055508 0.597633 6.4757e-01 0.6526229 0.7386576 0.717888 0.6448026 0.7059940 0.655402 0.701175 0.6404148 0.664147 0.7234523 0.7250087 0.706827 0.731750 0.8183741 0.731944 0.77924585 0.753294 0.6957643 0.5979674 0.5931282 0.678835 0.6914674 0.6905643 0.704631 0.6911061 0.640873 0.6205655 0.644969 0.691427 0.663073 0.7103756 0.7205944 0.7351533 0.7715203 0.7524666 4 0.7032046 0.7261905 -0.01500603 20 0.606297 0.662630 -0.0563335 0.7829557 0.0559842 insignificant 1 1.00000 insignificant 0.644953 0.0197256 weaklyHypometh 1 1 insignificant -0.03189741 0.267138 insignificant 1 insignificant 0.7032099 0.679189 0.0294164 20 0.607148 0.562148 0.0449991 2.4469e-03 9.9028e-01 weaklyHypermeth 4.0113e-02 1.0000e+00 weaklyHypermeth 3.0144e-02 9.4981e-01 weaklyHypermeth 4.7101e-01 1.0000e+00 insignificant 0.0289334 2.7945e-01 insignificant 1.0000e+00 insignificant 0.704256 0.7673703 -0.0405734 20 0.618955 0.639632 -0.0206777 9.8975e-01 4.5783e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 9.6869e-01 3.9593e-02 weaklyHypometh 1.000000 1.000000 insignificant -0.0594752 6.7521e-03 weaklyHypometh 0.4220061 insignificant 0.7259832 0.679189 0.0452318 20 0.649499 0.562148 0.0873509 4.5187e-02 9.9944e-01 weaklyHypermeth 5.5106e-01 1.0000e+00 insignificant 3.0706e-02 9.9965e-01 weaklyHypermeth 5.0338e-01 1.0000e+00 insignificant 0.0608308 5.2907e-02 insignificant 9.4478e-01 insignificant 0.7254457 0.7673703 -0.0275626 20 0.622568 0.639632 -0.01706398 9.9205e-01 1.5254e-01 insignificant 1.0000e+00 1.000000 insignificant 9.8570e-01 0.31060382 insignificant 1.0000000 1.00000 insignificant -0.0275778 2.6855e-01 insignificant 1.000000 insignificant 0.680838 0.7673703 -0.0717056 20 0.596175 0.639632 -0.0434570 9.9997e-01 5.1392e-04 weaklyHypometh 1.0000e+00 1.5115e-02 weaklyHypometh 1.0000e+00 3.6453e-03 weaklyHypometh 1.0000e+00 1.3019e-01 insignificant -0.0884086 3.8024e-03 weaklyHypometh 2.0013e-01 insignificant chr14 22362750 22363750 44761 ENSG00000215306 0.656647 518 20 0.545569 385 20 0.4812402 160 14 0.709587 464 20 0.746602 192 16 0.6663957 669 19 0.522366 215 19 0.5988907 288 20 0.5330299 181 19 0.6908730 171 19 0.700992 474 20 0.5091226 152 15 0.715796 295 17 0.6666667 87 14 0.6792841 266 20 0.6333333 116 12 0.596074 152 12 0.6038127 514 23 0.683819 276 20 0.6927832 513 20 0.680028 124 13 0.731707 139 12 0.755044 270 20 0.71583522 104 10 0.709856 309 17 0.673654 361 20 0.537776 148 14 0.4922078 94 8 0.668640 282 19 0.6632205 341 20 0.675111 344 20 0.6594201 592 19 0.6549267 294 20 0.598877 301 20 0.531525 297 15 0.648898 180 12 0.606698 208 19 0.575340 397 20 0.671739 471 20 0.664296 550 20 0.704354 432 20 0.7047776 310 20 0.710430 511 20 0.716761 0.6257660 0.5501974 0.7486346 0.7501829 0.7055508 0.597633 6.4757e-01 0.6526229 0.7386576 0.717888 0.6448026 0.7059940 0.655402 0.701175 0.6404148 0.664147 0.7234523 0.7250087 0.706827 0.731750 0.8183741 0.731944 0.77924585 0.753294 0.6957643 0.5979674 0.5931282 0.678835 0.6914674 0.6905643 0.704631 0.6911061 0.640873 0.6205655 0.644969 0.691427 0.663073 0.7103756 0.7205944 0.7351533 0.7715203 0.7524666 4 0.7032046 0.7261905 -0.01500603 20 0.606297 0.662630 -0.0563335 0.7829557 0.0559842 insignificant 1 1.00000 insignificant 0.644953 0.0197256 weaklyHypometh 1 1 insignificant -0.03189741 0.267138 insignificant 1 insignificant 0.7032099 0.679189 0.0294164 20 0.607148 0.562148 0.0449991 2.4469e-03 9.9028e-01 weaklyHypermeth 4.0113e-02 1.0000e+00 weaklyHypermeth 3.0144e-02 9.4981e-01 weaklyHypermeth 4.7101e-01 1.0000e+00 insignificant 0.0289334 2.7945e-01 insignificant 1.0000e+00 insignificant 0.704256 0.7673703 -0.0405734 20 0.618955 0.639632 -0.0206777 9.8975e-01 4.5783e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 9.6869e-01 3.9593e-02 weaklyHypometh 1.000000 1.000000 insignificant -0.0594752 6.7521e-03 weaklyHypometh 0.4220061 insignificant 0.7259832 0.679189 0.0452318 20 0.649499 0.562148 0.0873509 4.5187e-02 9.9944e-01 weaklyHypermeth 5.5106e-01 1.0000e+00 insignificant 3.0706e-02 9.9965e-01 weaklyHypermeth 5.0338e-01 1.0000e+00 insignificant 0.0608308 5.2907e-02 insignificant 9.4478e-01 insignificant 0.7254457 0.7673703 -0.0275626 20 0.622568 0.639632 -0.01706398 9.9205e-01 1.5254e-01 insignificant 1.0000e+00 1.000000 insignificant 9.8570e-01 0.31060382 insignificant 1.0000000 1.00000 insignificant -0.0275778 2.6855e-01 insignificant 1.000000 insignificant 0.680838 0.7673703 -0.0717056 20 0.596175 0.639632 -0.0434570 9.9997e-01 5.1392e-04 weaklyHypometh 1.0000e+00 1.5115e-02 weaklyHypometh 1.0000e+00 3.6453e-03 weaklyHypometh 1.0000e+00 1.3019e-01 insignificant -0.0884086 3.8024e-03 weaklyHypometh 2.0013e-01 insignificant chr14 22646750 22647750 44772 ACIN1 ENSG00000100813 0.800655 305 12 0.738091 135 12 0.6910132 115 12 0.792037 201 12 0.821770 98 9 0.8010185 264 12 0.677489 39 2 0.8241785 175 12 0.8570076 67 6 0.8743183 106 11 0.813191 322 12 0.8257576 36 2 0.857612 195 12 NA 0 0 0.8348169 117 12 0.7590909 34 3 0.951389 28 0 0.7929408 196 12 0.857810 221 12 0.8119947 299 12 0.762699 180 12 0.813924 138 12 0.818436 126 12 0.81339031 102 11 0.805650 109 8 0.776843 164 12 0.769089 200 12 0.8513889 37 1 0.755728 152 12 0.8737595 140 11 0.859974 131 11 0.7915887 207 12 0.6799219 136 11 0.732156 346 12 0.640997 135 7 0.805225 59 6 0.753156 184 9 0.778454 120 11 0.803021 191 12 0.799651 201 12 0.849269 193 12 0.8553534 150 11 0.852032 267 12 0.805120 0.7304586 0.7014000 0.7983247 0.8214903 0.7849410 0.721165 8.3360e-01 0.8492343 0.8726568 0.822255 0.8466074 0.8541313 NA 0.846727 0.7476770 0.955437 0.8041435 0.8775394 0.813386 0.763052 0.8154796 0.828124 0.81373692 0.797116 0.7871767 0.7738515 0.8627451 0.746751 0.8686272 0.8619982 0.787678 0.6717334 0.723637 0.6089142 0.796070 0.775585 0.774989 0.8041658 0.8028039 0.8553284 0.8702291 0.8485592 0 0.8127328 0.7882562 0.01623887 12 0.814748 0.799791 0.0149573 0.1644454 0.8947164 insignificant 1 1.00000 insignificant 0.137154 0.7915863 insignificant 1 1 insignificant 0.00188261 0.919089 insignificant 1 insignificant 0.8127328 0.738776 0.0729895 12 0.814748 0.745351 0.0693970 8.3445e-06 9.9986e-01 weaklyHypermeth 2.2605e-04 1.0000e+00 weaklyHypermeth 6.7047e-04 9.9918e-01 weaklyHypermeth 2.1628e-02 1.0000e+00 weaklyHypermeth 0.0779370 2.5966e-02 weaklyHypermeth 7.4189e-01 insignificant 0.812733 0.8323353 -0.0186935 12 0.814748 0.833345 -0.0185965 9.7104e-01 3.1995e-01 insignificant 1.0000e+00 1.000000 insignificant 8.8002e-01 7.2914e-01 insignificant 1.000000 1.000000 insignificant -0.0222767 2.6295e-01 insignificant 1.0000000 insignificant 0.7882562 0.738776 0.0553745 12 0.799791 0.745351 0.0544398 9.4246e-04 9.9906e-01 weaklyHypermeth 1.9635e-02 1.0000e+00 weaklyHypermeth 5.1758e-03 9.9574e-01 weaklyHypermeth 1.1763e-01 1.0000e+00 insignificant 0.0760543 2.7744e-02 weaklyHypermeth 6.7865e-01 insignificant 0.7882562 0.8323353 -0.0316287 12 0.799791 0.833345 -0.03355377 9.2139e-01 4.1171e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 8.4979e-01 0.25893264 insignificant 1.0000000 1.00000 insignificant -0.0241593 1.7961e-01 insignificant 1.000000 insignificant 0.738776 0.8323353 -0.0892274 12 0.745351 0.833345 -0.0879936 9.9953e-01 1.0705e-04 weaklyHypometh 1.0000e+00 4.2819e-03 weaklyHypometh 9.9658e-01 2.3938e-03 weaklyHypometh 1.0000e+00 1.1691e-01 insignificant -0.1002137 8.6371e-03 weaklyHypometh 3.6825e-01 insignificant chr14 23619850 23620850 44800 CPNE6 ENSG00000100884 0.031639 2281 35 0.029256 1146 36 0.0096217 1605 36 0.030285 1474 31 0.028795 1341 36 0.0069663 2044 34 0.006643 1876 36 0.0011962 1090 36 0.0056694 1527 36 0.0065975 1849 36 0.014831 1567 36 0.0041856 1774 36 0.005655 1144 36 0.0067304 326 13 0.0067613 1706 36 0.0049028 1737 36 0.032943 1141 23 0.0041067 2804 30 0.029095 1302 36 0.0093451 1795 34 0.020006 658 35 0.030543 825 27 0.042919 1452 36 0.00091575 657 34 0.032720 849 28 0.049804 1896 36 0.036111 1066 35 0.0081395 730 34 0.043265 1203 36 0.0007917 1697 36 0.029322 1692 36 0.0088329 1815 36 0.0212911 1041 36 0.020583 1464 36 0.020753 917 24 0.046983 353 31 0.069650 605 34 0.015728 1786 35 0.012757 1899 31 0.028495 1581 35 0.027212 1339 29 0.0038821 3973 31 0.031971 1408 29 0.011679 0.0049176 0.0059237 0.0044691 0.0089932 0.0078733 0.008858 9.0873e-05 0.0035729 0.0060844 0.014231 0.0031422 0.0026465 0.010964 0.008914 0.0029702 0.010291 0.0045401 0.0027734 0.010268 0.014688 0.0087811 0.020384 0.00072828 0.010131 0.0017981 0.0065534 0.0040384 0.014417 0.0010844 0.0042307 0.010046 0.0118509 0.014339 0.0030662 0.042142 0.038587 0.009632 0.0061498 0.0030831 0.0046988 0.0035506 0.0086589 29 0.0072652 0.0075669 0.00012461 36 0.047332 0.081347 -0.0340153 0.5391836 0.9796305 insignificant 1 1.00000 insignificant 0.507347 0.9859873 insignificant 1 1 insignificant -0.01151949 0.054495 insignificant 1 insignificant 0.0071415 0.015577 -0.0084057 36 0.017154 0.024087 -0.0069332 9.8901e-01 3.5851e-05 weaklyHypometh 1.0000e+00 8.9627e-03 weaklyHypometh 9.9605e-01 3.5100e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0187367 8.5534e-02 insignificant 1.0000e+00 insignificant 0.007173 0.0044139 0.0018892 31 0.023226 0.036425 -0.0131997 2.6759e-01 9.0286e-01 insignificant 1.0000e+00 1.000000 insignificant 5.8006e-01 9.8306e-01 insignificant 1.000000 1.000000 insignificant -0.0071022 2.7772e-01 insignificant 1.0000000 insignificant 0.0072947 0.015574 -0.0095727 36 0.049733 0.024087 0.0256461 1.0000e+00 7.4323e-04 weaklyHypometh 1.0000e+00 1.8581e-01 insignificant 1.0000e+00 4.8403e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0072172 4.9106e-01 insignificant 1.0000e+00 insignificant 0.0074365 0.0046087 0.0018608 31 0.064548 0.050431 0.01411735 9.5587e-01 8.9377e-01 insignificant 1.0000e+00 1.000000 insignificant 9.7470e-01 0.96639624 insignificant 1.0000000 1.00000 insignificant 0.0044173 5.5770e-01 insignificant 1.000000 insignificant 0.015739 0.0045111 0.0099010 31 0.047362 0.028850 0.0185123 8.8329e-02 9.9989e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.2091e-01 1.0000e+00 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0116345 2.8817e-01 insignificant 1.0000e+00 insignificant chr14 23797850 23798850 44804 TINF2 ENSG00000092330 0.876791 95 6 0.828847 87 5 0.8646259 81 7 0.979592 51 1 0.877976 82 7 0.8603175 85 5 0.957035 84 7 0.8608974 107 5 0.9038723 95 7 0.7927808 102 7 0.879139 187 7 0.7272157 98 5 0.890939 120 5 0.8214286 28 1 0.9192344 115 5 0.6757627 46 5 0.804422 49 5 0.8094262 72 1 0.883473 101 5 0.8247277 66 3 0.854411 67 7 0.908333 32 1 0.734896 84 5 0.80357143 31 3 0.590909 22 1 0.898011 117 7 0.823413 64 5 0.8392857 36 3 0.815090 117 5 0.9028329 151 7 0.755221 123 7 0.9389194 98 5 0.4774055 118 7 0.560489 112 5 0.220779 156 2 0.333333 28 1 0.336508 44 5 0.242857 58 5 0.819274 76 5 0.880556 72 5 0.926923 59 1 0.8852941 52 2 0.845614 50 2 0.683005 0.6547683 0.8089065 0.8783069 0.6642747 0.7442387 0.862852 7.0542e-01 0.8006580 0.8202180 0.560404 0.7459162 0.6379291 NA 0.707637 0.5085995 0.706129 0.5531269 0.7405333 0.729394 0.709082 0.6072103 0.709568 0.77546296 NA 0.6918350 0.4542181 0.5717593 0.612274 0.7089789 0.4884477 0.906612 0.1796359 0.446077 0.1506990 NA 0.069136 0.061111 0.8085832 0.7305556 0.6848027 0.7197712 0.5477132 1 0.8300915 0.8399146 0.00759994 5 0.871040 0.865019 0.0060208 0.5014994 0.4395740 insignificant 1 1.00000 insignificant 0.372944 0.5230807 insignificant 1 1 insignificant 0.02985078 0.360825 lowCoverage 1 lowCoverage 0.8300915 0.437984 0.4148330 5 0.871040 0.402002 0.4690382 2.2302e-35 9.9472e-01 hypermethylated 3.1860e-33 1.0000e+00 hypermethylated 2.5554e-12 9.9918e-01 hypermethylated 6.3884e-10 1.0000e+00 hypermethylated 0.4900298 1.4498e-04 lowCoverage 1.1152e-02 lowCoverage 0.828283 0.7350993 0.0153375 2 0.870059 0.847913 0.0221466 2.0752e-01 5.0630e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 4.1268e-01 1.6807e-01 lowCoverage 1.000000 1.000000 lowCoverage -0.0196070 4.3644e-01 lowCoverage 1.0000000 lowCoverage 0.8399146 0.437984 0.4089752 5 0.865019 0.402002 0.4630175 1.1722e-24 9.9976e-01 hypermethylated 1.4653e-22 1.0000e+00 hypermethylated 3.7017e-10 9.9995e-01 hypermethylated 7.4907e-08 1.0000e+00 hypermethylated 0.4601790 8.0673e-05 lowCoverage 5.7623e-03 lowCoverage 0.8368715 0.7346278 -0.0092163 2 0.844833 0.828823 0.01600959 4.4764e-01 7.7000e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 7.4942e-01 0.36006176 lowCoverage 1.0000000 1.00000 lowCoverage -0.0494578 1.5669e-01 lowCoverage 1.000000 lowCoverage 0.451417 0.7350993 -0.4442317 2 0.446275 0.847913 -0.4016381 9.9708e-01 3.5645e-09 lowCoverage 1.0000e+00 3.2404e-07 lowCoverage 9.9999e-01 3.9589e-06 lowCoverage 1.0000e+00 5.6556e-04 lowCoverage -0.5096368 1.0140e-04 lowCoverage 1.2675e-02 lowCoverage chr14 23854450 23855450 44806 LTB4R ENSG00000213903 0.639196 622 20 0.618276 330 17 0.7962969 393 13 0.655163 804 20 0.846065 210 12 0.5780902 721 20 0.885453 249 15 0.7485084 316 17 0.7465394 431 15 0.7930676 479 20 0.807613 571 20 0.5092301 198 15 0.957476 514 20 0.8961083 268 15 0.6657538 436 15 0.4886988 308 16 0.870227 75 3 0.6223651 948 20 0.938375 416 20 0.7938720 519 19 0.607494 219 20 0.523567 454 20 0.672167 478 20 0.59021103 308 13 0.841732 241 20 0.869264 482 20 0.778645 415 16 0.7442802 247 13 0.686201 411 17 0.8808495 494 19 0.916218 401 17 0.5562860 664 20 0.2230119 637 20 0.559561 300 20 0.444444 333 8 0.439048 159 16 0.212351 401 17 0.503409 482 18 0.742343 820 20 0.579524 870 20 0.751876 616 20 0.7429251 623 20 0.636757 666 20 0.772268 0.7239890 0.8067583 0.7960377 0.8659506 0.7587443 0.906173 8.6340e-01 0.8512611 0.8765867 0.872902 0.7452362 0.9486928 0.916704 0.868627 0.6761433 0.828671 0.7362615 0.9442564 0.869537 0.793450 0.6860964 0.785483 0.73752960 0.917347 0.9242369 0.7958051 0.8579527 0.822811 0.9022971 0.9252382 0.763434 0.2594922 0.631659 0.3452325 0.546850 0.327333 0.529286 0.8213089 0.6910339 0.8731683 0.8471127 0.7699269 10 0.7875795 0.7790939 0.00550712 20 0.687040 0.641834 0.0452060 0.2269326 0.9361749 insignificant 1 1.00000 insignificant 0.804883 0.9860734 insignificant 1 1 insignificant 0.02057592 0.685094 insignificant 1 insignificant 0.7876448 0.394543 0.3882392 20 0.694833 0.414414 0.2804190 1.7299e-53 1.0000e+00 hypermethylated 5.7664e-51 1.0000e+00 hypermethylated 1.0110e-20 1.0000e+00 hypermethylated 5.0552e-18 1.0000e+00 hypermethylated 0.3458478 8.8776e-04 hypermethylated 5.8617e-02 hypermethylated 0.787727 0.7123783 0.0299122 20 0.708800 0.677613 0.0311868 1.1778e-01 8.8981e-01 insignificant 1.0000e+00 1.000000 insignificant 9.0631e-02 9.1498e-01 insignificant 1.000000 1.000000 insignificant 0.0521336 2.8814e-01 insignificant 1.0000000 insignificant 0.7806452 0.394805 0.3935872 20 0.681834 0.437838 0.2439962 4.1227e-34 1.0000e+00 hypermethylated 8.2454e-32 1.0000e+00 hypermethylated 3.7559e-16 1.0000e+00 hypermethylated 1.8779e-13 1.0000e+00 hypermethylated 0.3252719 1.1856e-03 weaklyHypermeth 7.4103e-02 weaklyHypermeth 0.7809305 0.7123783 0.0264254 20 0.693959 0.677613 0.01634591 4.4644e-02 4.1693e-01 weaklyHypermeth 1.0000e+00 1.000000 insignificant 2.3160e-02 0.87190525 weaklyHypermeth 1.0000000 1.00000 insignificant 0.0315577 5.5868e-01 insignificant 1.000000 insignificant 0.393926 0.7123783 -0.3524899 20 0.347297 0.677613 -0.3303160 1.0000e+00 1.6030e-21 hypomethylated 1.0000e+00 4.0074e-19 hypomethylated 1.0000e+00 1.3729e-12 hypomethylated 1.0000e+00 6.8644e-10 hypomethylated -0.2937142 2.8717e-03 weaklyHypometh 1.7948e-01 insignificant chr14 23871450 23872450 44807 LTB4R ENSG00000213903 0.029868 1070 23 0.027605 1038 23 0.1181367 960 23 0.027035 611 11 0.079773 949 23 0.2779384 978 23 0.028741 1223 23 0.0926635 813 23 0.0499532 964 21 0.0248848 966 20 0.104584 1040 23 0.0421168 1210 20 0.060892 773 21 0.1647222 102 5 0.1774428 998 20 0.0332501 1200 21 0.013965 1146 18 0.0699789 1283 15 0.032756 963 23 0.0337800 736 23 0.048177 648 19 0.025425 167 11 0.034920 690 23 0.09363681 525 23 0.085891 654 11 0.022392 1094 23 0.149207 665 20 0.0268380 584 24 0.033854 757 23 0.0568574 1030 23 0.103908 1001 23 0.0865644 980 22 0.4155508 603 21 0.344770 706 23 0.320952 375 10 0.396196 324 13 0.242436 536 22 0.370972 868 23 0.026404 917 18 0.062081 1000 22 0.017983 730 16 0.1289772 889 18 0.101101 664 16 0.076502 0.0668120 0.1793273 0.0853751 0.0771858 0.1164574 0.082176 1.2374e-01 0.1130688 0.0804868 0.118133 0.0962309 0.0602555 0.133470 0.089417 0.0791967 0.099538 0.0909296 0.0893570 0.090332 0.110297 0.0625342 0.088876 0.05523179 0.073852 0.0585565 0.0834205 0.0645021 0.069852 0.0603724 0.0626664 0.186833 0.4011462 0.466446 0.2556278 0.375356 0.220009 0.294557 0.0854838 0.0476778 0.0442815 0.0801986 0.1411021 8 0.0622634 0.0618885 0.00555810 23 0.210194 0.129055 0.0811385 0.3144077 0.9467289 insignificant 1 1.00000 insignificant 0.044927 0.9992249 weaklyHypermeth 1 1 insignificant 0.01053183 0.580380 insignificant 1 insignificant 0.0622535 0.371848 -0.3067578 23 0.204355 0.269121 -0.0647658 1.0000e+00 4.2352e-84 hypomethylated 1.0000e+00 4.2352e-81 hypomethylated 1.0000e+00 1.2836e-26 hypomethylated 1.0000e+00 1.2836e-23 hypomethylated -0.2739751 7.5995e-06 hypomethylated 1.0856e-03 hypomethylated 0.062053 0.0838095 0.0177231 18 0.189697 0.152770 0.0369264 1.8742e-01 7.8910e-01 insignificant 1.0000e+00 1.000000 insignificant 8.4240e-02 9.9245e-01 insignificant 1.000000 1.000000 insignificant 0.0071954 7.8882e-01 insignificant 1.0000000 insignificant 0.0618533 0.371738 -0.3069436 23 0.122079 0.261847 -0.1397680 1.0000e+00 6.1498e-49 hypomethylated 1.0000e+00 6.1498e-46 hypomethylated 1.0000e+00 3.1411e-22 hypomethylated 1.0000e+00 3.1411e-19 hypomethylated -0.2845070 1.6482e-05 hypomethylated 1.6482e-03 hypomethylated 0.0612992 0.0838095 0.0084154 18 0.123702 0.152770 -0.02906834 6.6081e-01 6.5592e-01 insignificant 1.0000e+00 1.000000 insignificant 8.3388e-01 0.93715677 insignificant 1.0000000 1.00000 insignificant -0.0033365 8.9453e-01 insignificant 1.000000 insignificant 0.372428 0.0838095 0.2255049 18 0.301775 0.152770 0.1490046 3.2856e-19 1.0000e+00 hypermethylated 3.2856e-16 1.0000e+00 hypermethylated 3.2552e-11 1.0000e+00 hypermethylated 3.2552e-08 1.0000e+00 hypermethylated 0.2811705 1.4080e-05 hypermethylated 2.8159e-03 hypermethylated chr14 31476050 31477050 44912 ENSG00000207412 0.886025 413 16 0.798175 146 15 0.8196886 124 11 0.878175 377 15 0.792442 102 6 0.8631801 457 16 0.775388 115 8 0.9251470 155 11 0.4627976 53 4 0.8775401 85 7 0.872007 319 15 0.8773810 83 9 0.793729 146 9 NA 0 0 0.9134711 81 5 0.8046296 71 8 0.707792 73 5 0.8276329 373 15 0.851855 176 15 0.8554997 330 15 0.692308 51 5 0.909410 123 12 0.849682 275 16 0.83537415 64 8 0.932323 97 8 0.899808 209 15 0.852694 125 9 0.9500000 54 5 0.761807 108 8 0.8157738 197 15 0.907268 257 15 0.8287989 482 16 0.7625090 132 9 0.813265 141 9 0.855276 339 15 0.810020 71 8 0.711632 60 5 0.847550 233 15 0.917895 392 16 0.906023 470 16 0.916636 454 15 0.9227849 313 16 0.906078 431 15 0.918170 0.8437536 0.8164667 0.9155626 0.9377289 0.8981129 0.800258 8.8834e-01 0.7003040 0.8751257 0.892702 0.8926292 0.8921676 NA 0.938858 0.8288694 0.849788 0.8755096 0.8522325 0.890041 0.803131 0.9181791 0.885801 0.89232016 0.934139 0.8914359 0.8948420 0.9213052 0.851455 0.8906180 0.9253642 0.871260 0.7413102 0.839605 0.8868291 0.910942 0.808688 0.840130 0.9301653 0.9179711 0.9312269 0.9457038 0.9304428 3 0.8695298 0.8682664 -0.00453738 15 0.813033 0.791115 0.0219182 0.7617727 0.5406507 insignificant 1 1.00000 insignificant 0.986973 0.1280911 insignificant 1 1 insignificant -0.03280275 0.308386 insignificant 1 insignificant 0.8697662 0.832992 0.0373524 14 0.860859 0.839319 0.0215401 2.2472e-03 9.8358e-01 weaklyHypermeth 3.8089e-02 1.0000e+00 weaklyHypermeth 1.8849e-01 9.1670e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0200927 5.4093e-01 insignificant 1.0000e+00 insignificant 0.869624 0.9213592 -0.0521400 14 0.852163 0.912827 -0.0606644 1.0000e+00 8.5193e-05 weaklyHypometh 1.0000e+00 0.042596 weaklyHypometh 9.9997e-01 7.7307e-04 weaklyHypometh 1.000000 0.154613 insignificant -0.0937489 8.1194e-04 weaklyHypometh 0.1353236 insignificant 0.8686918 0.832992 0.0437532 14 0.837651 0.839319 -0.0016674 8.6302e-03 9.8120e-01 weaklyHypermeth 1.4148e-01 1.0000e+00 insignificant 1.1110e-01 9.9244e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0528954 1.0948e-01 insignificant 1.0000e+00 insignificant 0.8690535 0.9213592 -0.0464908 14 0.858755 0.912827 -0.05407242 9.9889e-01 2.8625e-04 weaklyHypometh 1.0000e+00 0.071564 weaklyHypometh 8.6408e-01 0.07277817 insignificant 1.0000000 1.00000 insignificant -0.0609461 1.6189e-02 weaklyHypometh 1.000000 insignificant 0.832821 0.9213592 -0.0840649 13 0.829276 0.912827 -0.0835508 9.9919e-01 1.1429e-06 weaklyHypometh 1.0000e+00 6.7230e-05 weaklyHypometh 9.9672e-01 3.5602e-03 weaklyHypometh 1.0000e+00 1.3019e-01 insignificant -0.1138415 3.4184e-03 weaklyHypometh 2.0013e-01 insignificant chr14 32048250 32049250 44944 ENSG00000209554 0.851150 424 5 0.818010 114 5 0.5675214 100 5 0.865685 272 5 0.933333 16 0 0.8760557 268 5 0.915556 46 5 0.9035764 92 5 0.8679972 65 5 0.9091667 67 5 0.909304 117 5 0.7055556 35 3 0.916771 104 5 NA 0 0 0.7983117 97 5 1.0000000 20 3 0.734127 35 5 0.4753988 368 5 0.923767 97 5 0.8503434 203 5 0.941818 39 4 0.701688 115 5 0.876505 186 5 0.66969697 45 4 0.797973 81 5 0.811061 171 5 0.817424 35 3 0.9000000 25 2 0.726786 70 5 0.9237886 149 5 0.937155 129 5 0.8962592 258 5 0.0092516 161 5 0.013333 65 5 0.000000 122 5 0.233016 42 5 0.037885 80 5 0.163589 228 5 0.853345 313 5 0.761538 298 5 0.776129 364 5 0.7136460 295 5 0.691364 335 5 0.850982 0.7971574 0.5723157 0.8666795 0.9629630 0.8741797 0.895988 9.0948e-01 0.8702148 0.9120660 0.915993 0.6716821 0.9275072 NA 0.811183 1.0000000 0.717923 0.4702416 0.9158910 0.844009 0.945076 0.7068708 0.876278 0.81691919 0.801163 0.7988163 0.8315709 0.9444444 0.700645 0.9244676 0.9411564 0.895676 0.0094999 0.011574 0.0000000 0.257540 0.035637 0.180720 0.8555898 0.7752760 0.7940009 0.7256596 0.6981838 3 0.8039370 0.8595549 -0.05794532 5 0.833067 0.713324 0.1197429 0.9994076 0.0810129 insignificant 1 1.00000 insignificant 0.882495 0.6426293 insignificant 1 1 insignificant -0.00062898 0.987733 lowCoverage 1 lowCoverage 0.8038598 0.070201 0.7343705 5 0.799681 0.072841 0.7268400 2.7565e-41 1.0000e+00 hypermethylated 5.5130e-39 1.0000e+00 hypermethylated 2.7869e-14 1.0000e+00 hypermethylated 9.2898e-12 1.0000e+00 hypermethylated 0.7565383 8.1235e-09 lowCoverage 2.7078e-06 lowCoverage 0.803860 0.7495327 0.0511392 5 0.799681 0.759964 0.0397163 2.0010e-01 9.0910e-01 insignificant 1.0000e+00 1.000000 insignificant 1.9161e-03 9.9989e-01 weaklyHypermeth 0.405964 1.000000 insignificant 0.0735127 9.5124e-02 lowCoverage 1.0000000 lowCoverage 0.8602151 0.070201 0.7895768 5 0.855989 0.072841 0.7831485 5.5009e-46 1.0000e+00 hypermethylated 1.8336e-43 1.0000e+00 hypermethylated 1.8337e-12 1.0000e+00 hypermethylated 6.1123e-10 1.0000e+00 hypermethylated 0.7571672 3.0095e-08 lowCoverage 1.2567e-05 lowCoverage 0.8602151 0.7495327 0.1022941 5 0.855989 0.759964 0.09602482 9.2712e-05 9.9797e-01 weaklyHypermeth 8.4284e-03 1.000000 weaklyHypermeth 7.8989e-04 0.99992857 weaklyHypermeth 0.1054314 1.00000 insignificant 0.0741417 8.4306e-02 lowCoverage 1.000000 lowCoverage 0.070201 0.7495327 -0.6862953 5 0.072841 0.759964 -0.6871237 1.0000e+00 2.8101e-27 hypomethylated 1.0000e+00 1.4050e-24 hypomethylated 1.0000e+00 1.9912e-08 hypomethylated 1.0000e+00 5.9398e-06 hypomethylated -0.6830256 3.4678e-07 hypomethylated 1.7339e-04 hypomethylated chr14 33477950 33478950 44987 NPAS3 ENSG00000151322 0.772350 293 10 0.708324 159 9 0.7715128 175 10 0.821136 194 10 0.738611 74 7 0.8012920 365 10 0.716800 96 6 0.6355713 128 8 0.8077311 90 10 0.6753175 104 10 0.813152 340 10 0.7514286 54 7 0.654209 137 10 0.6119048 40 5 0.7309322 122 10 0.6371591 59 6 0.711732 77 6 0.8013724 249 10 0.787838 172 6 0.7790891 281 10 0.849729 74 5 0.795411 121 6 0.817065 166 10 0.80066138 80 7 0.880290 81 10 0.775226 230 10 0.747934 101 3 0.8694444 46 4 0.824958 125 7 0.8221895 189 10 0.700676 190 10 0.7098769 467 10 0.6636467 106 8 0.652872 153 10 0.671268 155 10 0.937738 89 6 0.505119 113 9 0.713715 248 10 0.742332 255 10 0.735331 337 10 0.807146 263 10 0.8370438 277 10 0.707393 298 10 0.790507 0.7298321 0.7549180 0.8421087 0.7679869 0.8147931 0.731640 7.8013e-01 0.7490335 0.7102194 0.792435 0.7353974 0.6919870 0.749163 0.767239 0.8007480 0.757512 0.8529217 0.7880709 0.797275 0.826188 0.8080854 0.832348 0.82440602 0.865709 0.7992179 0.7388215 0.8906817 0.819123 0.8457816 0.8007949 0.802097 0.6619165 0.664804 0.7393080 0.892260 0.630658 0.727293 0.8214378 0.8390539 0.8470516 0.8364172 0.8094987 3 0.7787473 0.8142398 -0.03036315 10 0.756353 0.789343 -0.0329898 0.9989995 0.0359278 weaklyHypometh 1 1.00000 insignificant 0.999928 0.0081124 weaklyHypometh 1 1 insignificant -0.06308198 0.008564 weaklyHypometh 1 insignificant 0.7787473 0.715278 0.0652065 10 0.756353 0.612193 0.1441605 1.8414e-04 9.9999e-01 weaklyHypermeth 3.8362e-03 1.0000e+00 weaklyHypermeth 2.9401e-02 9.9976e-01 weaklyHypermeth 4.7101e-01 1.0000e+00 insignificant 0.0456469 4.7126e-01 insignificant 1.0000e+00 insignificant 0.778747 0.8167832 -0.0411556 10 0.756353 0.757807 -0.0014539 9.9121e-01 1.0784e-01 insignificant 1.0000e+00 1.000000 insignificant 9.9932e-01 5.4795e-02 insignificant 1.000000 1.000000 insignificant -0.0294759 3.3033e-01 insignificant 1.0000000 insignificant 0.8142398 0.715278 0.0960089 10 0.789343 0.612193 0.1771502 8.2387e-06 1.0000e+00 weaklyHypermeth 2.5746e-04 1.0000e+00 weaklyHypermeth 5.6292e-04 1.0000e+00 weaklyHypermeth 2.0104e-02 1.0000e+00 weaklyHypermeth 0.1087288 1.1948e-01 insignificant 1.0000e+00 insignificant 0.8142398 0.8167832 -0.0127877 10 0.789343 0.757807 0.03153584 7.4775e-01 4.7970e-01 insignificant 1.0000e+00 1.000000 insignificant 7.0879e-01 0.83035448 insignificant 1.0000000 1.00000 insignificant 0.0336060 2.8485e-01 insignificant 1.000000 insignificant 0.715278 0.8167832 -0.1074223 10 0.612193 0.757807 -0.1456144 1.0000e+00 1.9513e-04 weaklyHypometh 1.0000e+00 7.2271e-03 weaklyHypometh 1.0000e+00 9.3439e-04 weaklyHypometh 1.0000e+00 5.4964e-02 weaklyHypometh -0.0751228 2.6818e-01 insignificant 1.0000e+00 insignificant chr14 34187250 34188250 45026 SNX6 ENSG00000129515 0.834124 303 8 0.7805198 172 7 0.6986395 72 7 0.688008 260 8 0.7653061 56 7 0.8856145 238 7 0.766358 41 4 0.889581 209 7 0.9097222 43 4 0.8489583 63 7 0.889109 276 7 0.904762 23 0 0.7927489 125 6 0.779167 52 7 0.8144231 57 6 0.6666667 11 0 0.9705882 23 1 0.792573 244 8 0.8424036 122 7 0.853271 148 8 0.913420 61 6 1.0000000 9 0 0.897412 123 7 0.751923 55 4 0.8333333 18 0 0.8648503 214 7 0.809112 128 7 0.7129630 35 4 0.8708617 99 7 0.746598 226 7 0.836842 203 7 0.854794 201 8 0.7477175 99 7 0.6904356 182 4 0.765497 102 7 0.6666667 6 0 0.8052638 75 7 0.7987097 243 4 0.7836152 240 10 0.8643563 264 8 0.7277418 247 8 0.8185606 103 9 0.881141 214 8 0.865078 0.6917031 0.693710 0.859347 0.7490300 0.8200617 0.832579 0.851958 0.879973 0.813272 0.852969 0.876543 0.783343 0.8765432 0.7961380 0.7780615 0.9600327 0.848842 0.8263766 0.802910 0.909746 0.9908549 0.882857 0.817664 0.836534 0.835721 0.821920 0.734568 0.857731 0.7848739 0.8174139 0.819549 0.7191474 0.7415825 0.816569 7.9299e-01 0.70013098 0.7533743 0.8780062 0.822311 0.8337825 0.8357651 0.831416 0 0.877519 0.882653 -0.0050462 7 0.809298 0.779084 0.03021409 8.8503e-01 5.7987e-01 insignificant 1.0000000 1.0000000 insignificant 9.3540e-01 0.4323565 insignificant 1.0000e+00 1.00000 insignificant -0.02238196 0.4492247 insignificant 1 insignificant 0.877264 0.878359 0.0074682 7 0.782521 0.769507 0.0130135 1.9086e-02 9.1987e-02 weaklyHypermeth 3.1025e-01 1.0000e+00 insignificant 1.7211e-01 2.8420e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.2912e-02 2.8654e-02 lowCoverage 7.7444e-01 lowCoverage 0.877228 0.868914 -9.0974e-03 7 0.771157 0.777674 -0.0065170 8.3304e-01 5.5609e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.7715e-01 5.1379e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0035442 9.1721e-01 insignificant 1.000000 insignificant 0.884133 0.878359 1.7812e-02 7 0.848234 0.7695073 0.0787263 3.4153e-02 3.2649e-01 weaklyHypermeth 4.7435e-01 1.0000e+00 insignificant 1.5857e-01 8.5685e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0952941 1.1357e-02 lowCoverage 3.4416e-01 lowCoverage 0.883772 0.868914 -0.0045118 7 0.834900 0.777674 0.05722606 5.0591e-01 0.6698433 insignificant 1.0000e+00 1.0000 insignificant 5.5480e-01 0.9218875 insignificant 1.0000e+00 1 insignificant 0.02592612 0.48891565 insignificant 1.00000 insignificant 0.879261 0.869059 -0.0175476 7 0.7809340 0.767986 0.01294767 1.2172e-01 6.6160e-02 insignificant 1.0000e+00 9.7293e-01 insignificant 5.7627e-01 1.6961e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0693680 8.9953e-02 lowCoverage 1.0000000 lowCoverage chr14 34215950 34216950 45030 ENSG00000209571 0.525635 149 6 0.4872312 149 6 0.4916667 32 3 0.480742 139 6 0.4880952 48 6 0.4411113 86 6 0.490507 56 6 0.533333 86 6 0.5662338 55 6 0.5000000 14 1 0.527603 131 6 0.562500 32 2 0.6391109 55 4 0.486574 48 6 0.4629630 41 6 0.2222222 21 3 0.5000000 36 3 0.631418 132 6 0.5523148 55 5 0.556190 90 6 0.652778 24 2 0.5000000 4 0 0.504630 58 4 0.583333 42 6 0.4444444 46 3 0.4556973 80 6 0.638889 42 4 0.5714286 11 0 0.4424603 87 6 0.354235 72 5 0.481643 87 6 0.530636 95 6 0.4084849 91 6 0.5244709 44 3 0.594709 105 6 0.6666667 4 0 0.5929487 54 3 0.3817873 89 6 0.4791463 105 6 0.4362037 153 6 0.4952148 167 6 0.5135328 69 6 0.446179 144 6 0.572607 0.5159051 0.532075 0.520242 0.5430593 0.4807615 0.561386 0.568679 0.539737 0.676895 0.521245 0.641509 0.572701 0.4887841 0.5190776 0.3081761 0.5870022 0.593007 0.5419287 0.597628 0.672956 0.6151394 0.539832 0.544025 0.593291 0.511569 0.628931 0.584906 0.548218 0.4630547 0.5485371 0.556695 0.4399835 0.5223121 0.533584 5.6402e-01 0.58635704 0.5207462 0.5509637 0.497212 0.5353840 0.5306402 0.493700 0 0.567791 0.608025 -0.0158335 6 0.607397 0.462078 0.14531902 9.3175e-01 5.9155e-01 insignificant 1.0000000 1.0000000 insignificant 7.2569e-01 0.3656202 insignificant 1.0000e+00 1.00000 insignificant -0.00607525 0.8484735 lowCoverage 1 lowCoverage 0.567195 0.573643 0.0125400 6 0.576147 0.396437 0.1797102 1.4652e-01 5.2054e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.8801e-01 2.8962e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -2.0905e-02 6.8735e-01 lowCoverage 1.0000e+00 lowCoverage 0.566390 0.537618 2.1426e-02 6 0.518196 0.478562 0.0396339 1.3989e-01 8.0133e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.9156e-01 8.3142e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0332172 1.8040e-01 lowCoverage 1.000000 lowCoverage 0.608359 0.575130 2.8912e-02 6 0.456660 0.4530704 0.0035899 2.3446e-01 7.8726e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.1931e-01 7.9372e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0148302 7.8447e-01 lowCoverage 1.0000e+00 lowCoverage 0.610248 0.537618 0.0324207 6 0.532770 0.478562 0.05420858 1.9668e-01 0.9478738 insignificant 1.0000e+00 1.0000 insignificant 1.0243e-01 0.9944553 insignificant 1.0000e+00 1 insignificant 0.03929246 0.19633953 lowCoverage 1.00000 lowCoverage 0.576623 0.537618 0.0063420 6 0.5285822 0.478562 0.05002037 5.6692e-02 3.7943e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4771e-02 5.2703e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0541226 3.0531e-01 lowCoverage 1.0000000 lowCoverage chr14 34874750 34875750 45041 PSMA6 ENSG00000100902 0.593771 168 4 0.6122951 183 4 0.3942811 124 4 0.599334 141 5 0.3940324 76 4 0.7044016 224 4 0.449454 175 4 0.535136 99 4 0.4589167 109 4 0.8505128 73 4 0.738421 185 4 0.704545 56 4 0.5305024 71 4 0.553175 66 4 0.4444444 136 4 0.7045455 20 1 NA 0 0 0.512299 139 4 0.3081818 246 5 0.372556 287 4 0.822569 65 4 1.0000000 6 0 0.502893 121 4 0.604555 66 4 0.1000000 10 1 0.5683291 204 5 0.420827 93 4 0.6814408 76 4 0.4612392 215 5 0.721659 240 4 0.518039 244 4 0.551553 159 5 0.3114140 174 4 0.4143125 181 4 0.612903 193 5 0.5000000 119 5 0.6117233 145 5 0.5664860 305 5 0.5456995 199 6 0.5140476 201 5 0.1434148 155 5 0.3156957 230 4 0.533185 124 4 0.639376 0.6363289 0.503012 0.602714 0.5194046 0.7034662 0.675420 0.552324 0.572367 0.808341 0.734076 0.715539 0.516482 0.8267719 0.5334625 0.7108879 NA 0.626514 0.3538395 0.451194 0.786103 1.0000000 0.643399 0.607468 0.171512 0.636182 0.485572 0.815696 0.636921 0.7644452 0.5213094 0.597788 0.3883399 0.3746141 0.662603 6.5698e-01 0.78424714 0.6097854 0.7305879 0.504758 0.2513391 0.4849260 0.675121 4 0.577192 0.633756 -0.0567260 4 0.544224 0.516677 0.02754721 9.6450e-01 1.8683e-01 lowCoverage 1.0000000 1.0000000 lowCoverage 9.3914e-01 0.5427383 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.02885667 0.6951795 lowCoverage 1 lowCoverage 0.578149 0.523724 0.0499025 4 0.591419 0.380317 0.2111015 9.1256e-02 3.4282e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 2.8050e-01 6.5110e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 4.7762e-02 4.3924e-01 lowCoverage 1.0000e+00 lowCoverage 0.578149 0.515952 5.4149e-02 4 0.591419 0.413391 0.1780280 3.4205e-01 9.9829e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 1.8194e-01 9.9958e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 0.1401601 1.5691e-01 lowCoverage 1.000000 lowCoverage 0.635452 0.523724 1.0168e-01 4 0.581262 0.3803175 0.2009443 3.2938e-02 8.2870e-01 lowCoverage 4.6391e-01 1.0000e+00 lowCoverage 2.0984e-01 9.5031e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0766188 3.5840e-01 lowCoverage 1.0000e+00 lowCoverage 0.635452 0.515952 0.1146591 4 0.581262 0.413391 0.16787067 5.2442e-03 0.9999808 lowCoverage 2.4972e-01 1.0000 lowCoverage 8.1623e-02 0.9999619 lowCoverage 1.0000e+00 1 lowCoverage 0.16901679 0.12920635 lowCoverage 1.00000 lowCoverage 0.523724 0.515952 0.0186452 5 0.3803175 0.413391 -0.03307358 6.0684e-01 9.1320e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.8560e-01 9.5745e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0923980 3.5375e-01 lowCoverage 1.0000000 lowCoverage chr14 34894150 34895150 45045 PSMA6 ENSG00000100902 0.663140 296 8 0.6675905 242 8 0.5775598 178 8 0.705678 179 8 0.7169465 129 8 0.6231179 428 8 0.625462 205 8 0.581478 210 8 0.6263710 224 8 0.7213346 142 7 0.746825 278 8 0.577943 107 6 0.6244224 200 8 0.740741 24 1 0.6883704 187 8 0.5751689 128 6 0.6838427 110 5 0.681860 145 8 0.6156023 197 8 0.634882 351 8 0.656205 95 7 0.7282966 116 8 0.638624 223 8 0.562359 108 6 0.7403298 79 7 0.6333349 227 8 0.701058 132 8 0.5974956 101 6 0.6970798 135 8 0.729936 237 8 0.692624 236 8 0.693239 391 8 0.6984392 204 8 0.5418807 135 8 0.668305 186 8 0.6346697 67 5 0.6511939 149 8 0.6999368 222 8 0.5967600 282 8 0.7307153 271 8 0.6982737 249 8 0.7181789 252 8 0.645635 226 8 0.642269 0.6487680 0.646226 0.735355 0.7044859 0.6615976 0.670191 0.665928 0.727547 0.718375 0.756857 0.613301 0.692219 0.6851137 0.7186664 0.6391960 0.6980080 0.624187 0.6708292 0.727525 0.642859 0.6846182 0.627885 0.656515 0.690921 0.639372 0.691560 0.725076 0.687577 0.7178957 0.7288781 0.708147 0.6868434 0.6241948 0.701683 6.9477e-01 0.78400140 0.7472440 0.6347962 0.715471 0.6988161 0.7520619 0.679742 6 0.684596 0.698077 -0.0103580 8 0.623234 0.650436 -0.02720196 6.4891e-01 6.5625e-02 insignificant 1.0000000 1.0000000 insignificant 7.4302e-01 0.1817594 insignificant 1.0000e+00 1.00000 insignificant -0.01863165 0.3680723 insignificant 1 insignificant 0.684596 0.708204 -0.0203946 8 0.623234 0.606914 0.0163203 2.4111e-01 1.6711e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.2114e-01 3.0940e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.8460e-03 8.6164e-01 insignificant 1.0000e+00 insignificant 0.684596 0.695312 -1.6121e-02 8 0.623234 0.659735 -0.0365013 8.1762e-01 1.7025e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.4341e-01 1.8513e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0239957 4.2166e-01 insignificant 1.000000 insignificant 0.698077 0.708204 -7.0602e-03 8 0.650436 0.6069137 0.0435223 1.0157e-01 1.9554e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.4575e-01 4.3103e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0234777 4.3404e-01 insignificant 1.0000e+00 insignificant 0.698077 0.695312 -0.0042534 8 0.650436 0.659735 -0.00929936 2.9070e-01 0.0298498 weaklyHypometh 1.0000e+00 1.0000 insignificant 6.2954e-01 0.1332290 insignificant 1.0000e+00 1 insignificant -0.00536407 0.86127791 insignificant 1.00000 insignificant 0.708204 0.695312 0.0088376 8 0.6069137 0.659735 -0.05282165 4.4688e-01 4.6288e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.3894e-01 5.6054e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0288418 4.2572e-01 insignificant 1.0000000 insignificant chr14 35546950 35547950 45068 BRMS1L ENSG00000100916 0.700775 170 6 0.4923329 207 5 0.5121624 119 5 0.643976 147 5 0.4751844 146 5 0.6567048 345 6 0.503768 146 5 0.617074 155 5 0.5048142 127 6 0.6261438 73 5 0.593595 240 6 0.545535 91 5 0.6654429 81 5 0.676037 74 5 0.6275300 147 6 0.2945489 95 5 0.1250000 18 2 0.770061 113 5 0.7366479 119 5 0.687877 244 6 0.721350 98 5 0.6269989 158 5 0.588399 57 4 0.401512 143 6 0.6659705 165 5 0.6356875 212 5 0.406365 271 5 0.6186639 111 5 0.5575808 109 5 0.706882 208 5 0.686946 176 6 0.644323 367 6 0.6615190 64 5 0.5256410 52 4 0.596647 152 6 0.5619048 19 2 0.5384948 154 5 0.6786674 200 6 0.7358025 146 5 0.6209239 83 4 0.6317460 115 6 0.7294320 73 5 0.715874 159 5 0.802914 0.4911177 0.601441 0.742450 0.5150343 0.7552858 0.523989 0.704249 0.533453 0.708020 0.693347 0.552238 0.764013 0.8073084 0.7132370 0.3014991 0.3867919 0.701772 0.8661241 0.791270 0.670932 0.6915816 0.682361 0.421314 0.727750 0.788190 0.394752 0.588613 0.511373 0.8354544 0.7973489 0.761452 0.7406553 0.4897278 0.725736 5.4197e-01 0.65326806 0.7654505 0.8457563 0.729486 0.7518931 0.8557168 0.820361 4 0.661533 0.657831 -0.0041209 5 0.586754 0.588640 -0.00188513 7.9197e-01 4.7990e-01 insignificant 1.0000000 1.0000000 insignificant 8.5394e-01 0.4162280 insignificant 1.0000e+00 1.00000 insignificant -0.03229617 0.4845468 insignificant 1 insignificant 0.661533 0.678627 -0.0168326 5 0.586754 0.595112 -0.0083578 8.3224e-01 6.4637e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.0635e-01 6.9957e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -2.1052e-02 6.2957e-01 lowCoverage 1.0000e+00 lowCoverage 0.661533 0.807292 -1.3558e-01 5 0.586754 0.699573 -0.1128183 1.0000e+00 9.9415e-04 weaklyHypometh 1.0000e+00 1.9883e-01 insignificant 9.9997e-01 4.9259e-04 weaklyHypometh 1.0000e+00 0.16419624 insignificant -0.1139954 1.4289e-02 weaklyHypometh 0.961856 insignificant 0.657831 0.678627 -1.4003e-02 5 0.588640 0.5951123 -0.0064727 5.8592e-01 5.7642e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.9744e-01 7.5391e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0112442 7.8244e-01 lowCoverage 1.0000e+00 lowCoverage 0.657831 0.807292 -0.1351834 5 0.588640 0.699573 -0.11093319 9.9303e-01 0.0035326 weaklyHypometh 1.0000e+00 0.8272 insignificant 9.8711e-01 0.0030089 weaklyHypometh 1.0000e+00 1 insignificant -0.08169919 0.05647613 insignificant 1.00000 insignificant 0.678627 0.807292 -0.1167618 5 0.5951123 0.699573 -0.10446052 9.9999e-01 7.3001e-03 weaklyHypometh 1.0000e+00 1.4314e-01 insignificant 9.9988e-01 1.4068e-02 weaklyHypometh 1.0000e+00 3.1972e-01 insignificant -0.0929434 3.0174e-02 lowCoverage 0.6705414 lowCoverage chr14 49509850 49510850 45188 ARF6 ENSG00000165527 0.757581 162 6 0.6835017 82 6 0.6807110 70 6 0.850000 100 6 0.9444444 40 6 0.7896329 130 6 0.972222 60 5 0.720238 45 3 0.9083333 38 4 0.8604031 81 6 0.672253 132 6 0.701088 52 6 0.7579365 52 6 NA 0 0 0.9091575 69 6 0.8972474 72 6 0.7422466 62 6 0.828766 149 6 0.8572751 80 6 0.882766 145 6 0.902778 19 0 0.9047619 49 6 0.796273 117 6 0.984848 34 2 0.8968254 25 2 0.8174010 84 6 0.962500 28 2 0.9027778 35 2 0.6837121 46 3 0.751667 73 5 0.773060 76 6 0.852913 214 6 0.7115594 77 6 0.6380009 57 5 0.822894 94 6 0.8655271 59 6 0.8500000 19 2 0.6616162 78 6 0.8790211 176 6 0.8448229 196 6 0.8328202 134 6 0.7884961 129 6 0.873131 159 6 0.762193 0.7372707 0.697303 0.837698 0.9126984 0.8178273 0.955467 0.752173 0.890079 0.872069 0.665439 0.721167 0.745087 NA 0.9224141 0.9364810 0.7652189 0.825282 0.8348136 0.886299 0.845899 0.9376417 0.808513 0.974747 0.880952 0.823047 0.940675 0.887566 0.714917 0.7891005 0.8143338 0.854948 0.7290569 0.6095241 0.775045 8.4337e-01 0.80471440 0.7071509 0.8658621 0.837738 0.8596613 0.7894688 0.879839 2 0.810611 0.845000 -0.0329633 6 0.805098 0.836553 -0.03145455 9.9176e-01 3.1604e-02 weaklyHypometh 1.0000000 1.0000000 insignificant 9.9756e-01 0.0123281 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.04110161 0.2382103 lowCoverage 1 lowCoverage 0.810611 0.750000 0.0600601 6 0.805098 0.753546 0.0515519 5.6259e-03 9.6357e-01 weaklyHypermeth 1.0046e-01 1.0000e+00 insignificant 1.0523e-02 9.8338e-01 weaklyHypermeth 2.3496e-01 1.0000e+00 insignificant 5.3092e-02 2.8516e-01 insignificant 1.0000e+00 insignificant 0.810611 0.847607 -3.8389e-02 6 0.805098 0.845511 -0.0404126 9.9089e-01 1.1399e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7152e-01 2.1081e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0323003 2.5270e-01 insignificant 1.000000 insignificant 0.845000 0.750000 9.5187e-02 6 0.836553 0.7535461 0.0830065 2.3495e-05 9.9316e-01 weaklyHypermeth 6.5264e-04 1.0000e+00 weaklyHypermeth 6.0640e-05 9.9995e-01 weaklyHypermeth 3.0320e-03 1.0000e+00 weaklyHypermeth 0.0941935 8.2860e-02 lowCoverage 1.0000e+00 lowCoverage 0.845000 0.847607 -0.0039230 6 0.836553 0.845511 -0.00895800 7.1226e-01 0.6828282 insignificant 1.0000e+00 1.0000 insignificant 2.7196e-01 0.9572337 insignificant 1.0000e+00 1 insignificant 0.00880136 0.77755867 lowCoverage 1.00000 lowCoverage 0.750000 0.847607 -0.0984560 6 0.7535461 0.845511 -0.09196446 9.9813e-01 1.7002e-03 weaklyHypometh 1.0000e+00 4.0481e-02 weaklyHypometh 9.9694e-01 3.0628e-03 weaklyHypometh 1.0000e+00 1.0938e-01 insignificant -0.0853921 9.6427e-02 insignificant 1.0000000 insignificant chr14 51555650 51556650 45238 C14orf166 ENSG00000087302 0.968240 265 5 0.7818182 31 5 1.0000000 6 0 0.960059 212 5 0.9333333 16 0 0.9405556 123 5 0.964286 22 0 0.950000 38 5 0.8666667 15 0 0.8857143 45 4 0.907586 117 5 NA 0 0 1.0000000 20 4 1.000000 16 0 1.0000000 16 0 1.0000000 2 0 NA 0 0 0.806196 450 4 0.9466667 64 4 0.972381 126 5 1.000000 8 0 1.0000000 24 3 0.955556 42 5 0.958333 28 3 0.9792627 118 4 0.7642857 74 5 1.000000 13 0 NA 0 0 0.8376290 53 4 0.953247 40 5 0.877778 33 5 0.905465 116 5 1.0000000 52 5 0.8769231 55 4 0.977778 21 1 1.0000000 50 4 0.9500000 18 0 0.9809524 96 5 0.9707071 84 5 0.8598494 97 5 0.8872970 129 5 1.0000000 62 4 0.931140 134 5 0.976512 0.7333333 1.000000 0.985143 0.8888889 0.9408333 0.930556 0.951389 0.796296 0.933333 0.913214 NA 1.000000 1.0000000 1.0000000 NA NA 0.954789 0.9333333 0.973810 1.000000 1.0000000 0.938272 0.995439 0.985279 0.932804 1.000000 NA 0.787823 0.9920635 0.8888889 0.908911 1.0000000 0.8418803 1.000000 1.0000e+00 0.91666667 0.9841270 0.9969136 0.831633 0.9526635 1.0000000 0.930556 0 0.951868 0.927140 0.0250345 5 0.959728 0.770773 0.18895461 2.4795e-02 9.5216e-01 weaklyHypermeth 1.0000000 1.0000000 insignificant 4.0810e-01 0.5549081 insignificant 1.0000e+00 1.00000 insignificant 0.00783092 0.7809679 lowCoverage 1 lowCoverage 0.951807 0.958904 -0.0067009 5 0.951673 0.960622 -0.0089494 8.7532e-01 1.3622e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9447e-01 8.8758e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -2.6303e-02 3.0399e-01 lowCoverage 1.0000e+00 lowCoverage 0.951807 0.930830 1.7408e-02 5 0.951673 0.928736 0.0229366 1.6794e-01 9.6485e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.4157e-01 9.1371e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0081736 7.9345e-01 lowCoverage 1.000000 lowCoverage 0.928832 0.958904 -2.9637e-02 5 0.924928 0.9606224 -0.0356949 9.3975e-01 5.5493e-03 weaklyHypometh 1.0000e+00 9.2488e-01 insignificant 9.6055e-01 1.2525e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0341341 2.7163e-01 lowCoverage 1.0000e+00 lowCoverage 0.928832 0.930830 -0.0025413 5 0.924928 0.928736 -0.00380896 6.1392e-01 0.5448472 insignificant 1.0000e+00 1.0000 insignificant 3.3218e-01 0.9377656 insignificant 1.0000e+00 1 insignificant 0.00034266 0.99228500 lowCoverage 1.00000 lowCoverage 0.958904 0.930830 0.0280769 5 0.9606224 0.928736 0.03188593 1.2329e-01 9.7021e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.9052e-02 9.9913e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.0344768 3.1446e-01 lowCoverage 1.0000000 lowCoverage chr14 53879750 53880750 45316 ENSG00000219778 0.910567 211 5 0.5896277 91 5 0.2714286 36 5 0.922032 189 5 0.9418182 39 3 0.9581385 162 5 0.766667 24 3 0.866814 81 5 0.7987879 54 5 0.9716667 95 5 0.887979 151 5 0.633333 13 0 0.9368861 157 5 0.831429 68 5 0.8369748 65 5 0.7500000 4 0 1.0000000 2 0 0.445296 247 5 0.8876190 87 5 0.958269 127 5 0.687500 44 5 0.3779221 94 5 0.828788 51 5 0.873333 46 5 0.8684211 98 5 0.9209579 147 5 0.871841 92 5 0.9250000 35 5 0.9035053 107 5 0.906850 170 5 0.945093 141 5 0.950155 143 5 0.7655578 73 5 0.8102941 71 5 0.666667 101 3 0.5000000 2 0 0.9866667 74 5 0.8918609 168 5 0.4169386 156 5 0.3450520 134 5 0.5985507 103 5 0.2467164 121 5 0.482543 112 5 0.923263 0.6833448 0.320742 0.917851 0.9219406 0.9694576 0.862179 0.842642 0.792249 0.979567 0.882620 0.756410 0.941504 0.8591575 0.8299935 0.8193943 0.8674712 0.425362 0.9281822 0.961841 0.758413 0.4098402 0.822625 0.840064 0.851164 0.926579 0.836674 0.902644 0.877111 0.8846369 0.9358720 0.938512 0.7159978 0.7255373 0.678595 7.0307e-01 0.98333333 0.8488415 0.4283771 0.394419 0.6312012 0.2489064 0.538012 3 0.827115 0.863014 -0.0356579 5 0.689361 0.722116 -0.03275568 9.6207e-01 2.5144e-01 insignificant 1.0000000 1.0000000 insignificant 6.6154e-01 0.0517625 insignificant 1.0000e+00 1.00000 insignificant -0.03001391 0.6377199 lowCoverage 1 lowCoverage 0.827550 0.811861 0.0170289 5 0.827233 0.844825 -0.0175918 1.8897e-01 4.0837e-02 inconclusive 1.0000e+00 1.0000e+00 insignificant 7.1570e-01 4.4074e-02 inconclusive 1.0000e+00 1.0000e+00 insignificant 3.8092e-02 6.5288e-01 lowCoverage 1.0000e+00 lowCoverage 0.827550 0.416933 4.1856e-01 5 0.827233 0.406275 0.4209579 2.0317e-15 1.0000e+00 hypermethylated 1.0158e-12 1.0000e+00 hypermethylated 1.3143e-08 1.0000e+00 hypermethylated 4.3809e-06 1.00000000 hypermethylated 0.3903065 5.5608e-04 lowCoverage 0.118349 lowCoverage 0.863753 0.811861 4.4011e-02 5 0.866540 0.8448247 0.0217150 2.2206e-01 3.0453e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.6683e-01 2.2492e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0681062 4.3742e-01 lowCoverage 1.0000e+00 lowCoverage 0.863753 0.416933 0.4549198 5 0.866540 0.406275 0.46026472 2.1843e-16 1.0000000 hypermethylated 1.0922e-13 1.0000 hypermethylated 1.2209e-08 1.0000000 hypermethylated 6.1043e-06 1 hypermethylated 0.42032043 0.00034265 hypermethylated 0.17132 insignificant 0.811861 0.416933 0.3888796 5 0.8448247 0.406275 0.43854971 1.2502e-12 9.9378e-01 hypermethylated 4.1675e-10 1.0000e+00 hypermethylated 5.8023e-05 9.9893e-01 hypermethylated 1.9341e-02 1.0000e+00 hypermethylated 0.3522142 4.0643e-03 lowCoverage 0.2014734 lowCoverage chr14 53880250 53881250 45317 ENSG00000219778 0.918626 261 6 0.6808572 114 6 0.3258929 71 6 0.909112 259 6 0.8108586 53 4 0.9616838 238 6 0.804762 70 4 0.875105 130 6 0.7876804 110 6 0.9521121 127 6 0.674305 175 6 0.539337 37 1 0.8220796 195 6 0.859524 76 6 0.8302915 129 6 0.7272727 48 1 0.8875000 24 1 0.492702 321 6 0.8210884 110 6 0.958914 166 6 0.640625 49 5 0.3093532 124 6 0.708214 112 6 0.908333 58 6 0.8917293 109 6 0.9276683 184 6 0.752033 107 6 0.7013889 58 6 0.7678099 122 6 0.917839 235 6 0.948184 196 6 0.957803 209 6 0.8430570 124 6 0.7102101 97 6 0.583333 110 4 0.5873016 23 1 0.7592593 97 7 0.9183622 234 6 0.5342665 186 6 0.3565088 163 6 0.5032677 187 6 0.2517509 186 6 0.502119 177 6 0.908421 0.7566390 0.460111 0.864530 0.8751345 0.9478083 0.841991 0.826092 0.772734 0.923361 0.905973 0.708451 0.867732 0.9048856 0.8192408 0.7747267 0.7643961 0.524182 0.8896568 0.948598 0.836851 0.3663408 0.819682 0.859524 0.867020 0.914342 0.860186 0.913961 0.870628 0.8865811 0.9448864 0.943490 0.7811500 0.7886746 0.782947 7.2217e-01 0.98874459 0.8879289 0.5020120 0.400709 0.5983828 0.2580027 0.558138 4 0.813928 0.855406 -0.0414661 6 0.690752 0.644348 0.04640380 7.4003e-01 2.9465e-01 insignificant 1.0000000 1.0000000 insignificant 6.7036e-01 0.0339955 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.00392985 0.9528030 insignificant 1 insignificant 0.814228 0.833577 -0.0216733 6 0.767502 0.708500 0.0590025 8.0723e-02 1.7002e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 6.1668e-01 4.4698e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 4.8398e-02 4.8468e-01 insignificant 1.0000e+00 insignificant 0.814091 0.438265 3.8341e-01 6 0.738440 0.439807 0.2986325 1.9630e-19 8.5835e-01 hypermethylated 1.9630e-16 1.0000e+00 hypermethylated 7.1122e-11 9.9106e-01 hypermethylated 3.5561e-08 1.00000000 hypermethylated 0.3524026 5.9174e-04 hypermethylated 0.118349 insignificant 0.855954 0.833577 1.3959e-02 6 0.715942 0.7084997 0.0074427 3.5973e-01 3.4538e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.6830e-01 2.0887e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0523278 5.0868e-01 insignificant 1.0000e+00 insignificant 0.856960 0.438265 0.4324327 6 0.763769 0.439807 0.32396110 2.3089e-17 0.9796949 hypermethylated 2.3089e-14 1.0000 hypermethylated 3.0380e-09 0.9986338 hypermethylated 3.0380e-06 1 hypermethylated 0.35633248 0.00058535 hypermethylated 0.19512 insignificant 0.835294 0.438265 0.4005429 6 0.7220622 0.439807 0.28225475 1.9169e-14 9.9994e-01 hypermethylated 9.5845e-12 1.0000e+00 hypermethylated 1.3094e-05 9.9067e-01 hypermethylated 6.5468e-03 1.0000e+00 hypermethylated 0.3040046 3.4997e-03 weaklyHypermeth 0.1944296 insignificant chr14 54309450 54310450 45338 SAMD4A ENSG00000020577 0.335779 393 11 0.1513299 603 11 0.2491973 343 11 0.294563 255 11 0.2178151 214 11 0.4025316 551 11 0.232746 411 11 0.285461 366 11 0.1797288 362 11 0.2757964 347 10 0.409120 489 11 0.247310 300 10 0.1500054 392 10 0.203704 25 2 0.1407890 359 10 0.1914846 227 10 0.1179394 397 8 0.166120 210 9 0.1570202 350 11 0.269204 493 11 0.453910 143 10 0.1496599 99 6 0.473315 277 11 0.393564 179 9 0.3094918 113 8 0.2477567 613 11 0.194139 211 10 0.2718381 128 10 0.2313041 387 11 0.190640 689 11 0.208986 695 11 0.450763 556 11 0.0143972 452 11 0.0115283 268 11 0.000000 406 11 0.0000000 134 8 0.0014205 310 11 0.0405118 646 11 0.3880284 524 11 0.3715040 433 11 0.1961287 311 10 0.1946253 367 9 0.431618 385 10 0.312840 0.1129605 0.226170 0.254544 0.1981906 0.4148997 0.209397 0.257266 0.154310 0.231120 0.362387 0.170138 0.062438 0.1922697 0.1456796 0.2430853 0.1135899 0.140864 0.0690605 0.220200 0.342927 0.1608172 0.486614 0.382381 0.267750 0.180400 0.155793 0.204561 0.196973 0.1570927 0.1418552 0.413027 0.0108858 0.0090738 0.000000 3.6886e-04 0.00017058 0.0054863 0.4267484 0.235314 0.1180151 0.1701291 0.341544 7 0.217342 0.240088 -0.0268806 11 0.229347 0.255880 -0.02653311 9.7166e-01 1.4524e-01 insignificant 1.0000000 1.0000000 insignificant 8.5338e-01 0.1156040 insignificant 1.0000e+00 1.00000 insignificant -0.06406513 0.1114828 insignificant 1 insignificant 0.217373 0.011282 0.2162472 11 0.250196 0.010900 0.2392965 1.2160e-32 1.0000e+00 hypermethylated 2.0266e-30 1.0000e+00 hypermethylated 1.7365e-24 1.0000e+00 hypermethylated 8.6823e-22 1.0000e+00 hypermethylated 2.2257e-01 9.1127e-11 hypermethylated 1.1391e-08 hypermethylated 0.217158 0.274257 -4.0908e-02 11 0.211705 0.311564 -0.0998595 9.0345e-01 3.5992e-05 weaklyHypometh 1.0000e+00 1.1997e-02 weaklyHypometh 9.3169e-01 1.3410e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant -0.0824986 1.8339e-01 insignificant 1.000000 insignificant 0.240265 0.011282 2.3643e-01 11 0.279142 0.0108999 0.2682417 1.0793e-26 1.0000e+00 hypermethylated 1.5419e-24 1.0000e+00 hypermethylated 2.7983e-21 1.0000e+00 hypermethylated 2.7983e-18 1.0000e+00 hypermethylated 0.2866377 2.5142e-06 hypermethylated 2.2856e-04 hypermethylated 0.240088 0.274393 -0.0125219 11 0.255880 0.337528 -0.08164803 5.2633e-01 0.0072822 weaklyHypometh 1.0000e+00 1.0000 insignificant 4.8278e-01 0.0857458 insignificant 1.0000e+00 1 insignificant -0.01843351 0.76844863 insignificant 1.00000 insignificant 0.011282 0.274170 -0.2693024 11 0.0108999 0.322758 -0.31185777 1.0000e+00 5.3689e-24 hypomethylated 1.0000e+00 2.6478e-21 hypomethylated 1.0000e+00 9.9718e-14 hypomethylated 1.0000e+00 9.9718e-11 hypomethylated -0.3050712 3.4881e-03 weaklyHypometh 0.1944296 insignificant chr14 54639350 54640350 45344 MAPK1IP1L ENSG00000168175 0.169615 201 6 0.1001203 251 6 0.1153738 248 6 0.079963 204 5 0.1274510 83 4 0.1889072 282 6 0.129425 173 4 0.163028 175 4 0.1130100 259 4 0.2099519 177 4 0.232431 118 4 0.132835 108 4 0.0892960 212 4 0.201475 82 4 0.0954185 188 4 0.2516234 117 4 0.0634058 108 4 0.120907 252 5 0.0661058 59 4 0.121000 283 6 0.305507 48 4 0.0986077 150 4 0.176433 133 6 0.167927 70 4 0.1497884 66 4 0.1153791 250 6 0.145938 163 4 0.0849436 87 4 0.1582386 161 4 0.121044 345 6 0.075450 253 6 0.161387 266 6 0.0519514 299 6 0.1870629 86 4 0.000000 355 6 0.0227273 37 4 0.0714394 123 4 0.1456623 232 6 0.1512691 191 6 0.1772529 197 5 0.0539489 171 4 0.2208311 176 4 0.138380 253 6 0.149084 0.1188856 0.181421 0.128609 0.1464292 0.2728921 0.145549 0.170856 0.122886 0.230749 0.243500 0.150326 0.098045 0.2164876 0.1108861 0.2762222 0.0728627 0.105503 0.0706010 0.132039 0.336824 0.1042444 0.253584 0.186680 0.162041 0.157713 0.160271 0.098953 0.174736 0.1593832 0.1166441 0.241807 0.0760316 0.2129980 0.000000 2.6689e-02 0.07769437 0.2426908 0.1527284 0.167790 0.0848573 0.1315081 0.091766 4 0.145251 0.155120 -0.0104441 5 0.121392 0.121585 -0.00019321 5.3721e-01 5.1332e-01 insignificant 1.0000000 1.0000000 insignificant 3.6560e-01 0.5838106 insignificant 1.0000e+00 1.00000 insignificant -0.00815316 0.7047685 lowCoverage 1 lowCoverage 0.145251 0.069788 0.0795959 5 0.121392 0.049630 0.0717619 8.0446e-05 9.9999e-01 weaklyHypermeth 1.8708e-03 1.0000e+00 weaklyHypermeth 3.2532e-04 1.0000e+00 weaklyHypermeth 1.1614e-02 1.0000e+00 weaklyHypermeth 5.8760e-02 1.1059e-01 lowCoverage 1.0000e+00 lowCoverage 0.145251 0.131579 2.4212e-02 4 0.121392 0.144636 -0.0232438 4.8829e-01 1.0501e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 4.3422e-01 3.6774e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage -0.0097692 7.5699e-01 lowCoverage 1.000000 lowCoverage 0.155120 0.069788 8.7488e-02 6 0.121585 0.0496301 0.0719551 6.8587e-05 9.9994e-01 weaklyHypermeth 1.6330e-03 1.0000e+00 weaklyHypermeth 8.7849e-04 9.9998e-01 weaklyHypermeth 2.8338e-02 1.0000e+00 weaklyHypermeth 0.0669131 8.4697e-02 lowCoverage 1.0000e+00 lowCoverage 0.155120 0.131579 0.0335974 4 0.121585 0.144636 -0.02305062 2.1736e-01 0.1452293 lowCoverage 1.0000e+00 1.0000 lowCoverage 1.4892e-01 0.1870473 lowCoverage 1.0000e+00 1 lowCoverage -0.00161604 0.96166451 lowCoverage 1.00000 lowCoverage 0.069788 0.131579 -0.0547451 4 0.0496301 0.144636 -0.09500574 9.9876e-01 1.5167e-03 lowCoverage 1.0000e+00 3.7918e-02 lowCoverage 9.9997e-01 1.7674e-03 lowCoverage 1.0000e+00 7.3640e-02 lowCoverage -0.0685292 1.2415e-01 insignificant 1.0000000 insignificant chr14 64191550 64192550 45561 C14orf50 ENSG00000165807 0.659226 133 8 0.5398026 299 8 0.5111111 51 4 0.892308 122 8 0.6319444 41 1 0.7127612 203 8 0.574189 88 8 0.823250 136 8 0.9703704 54 4 0.6616162 40 3 0.765560 278 8 0.444444 18 0 0.7332305 81 4 0.730159 47 4 0.8223684 57 4 0.2222222 32 2 0.5000000 7 0 0.685951 139 8 0.6975753 243 8 0.801100 220 8 0.763633 62 4 0.5956229 78 8 0.752820 98 8 0.719217 85 8 0.7329726 66 7 0.8231018 318 8 0.667217 115 7 0.8149351 39 4 0.6226724 158 4 0.721513 297 8 0.658165 269 8 0.693255 344 8 0.5178545 148 8 0.5831636 102 8 0.541686 181 7 0.5000000 10 0 0.5632132 114 8 0.6806417 247 8 0.7023500 111 8 0.6827251 138 5 0.7026455 90 8 0.7351190 33 4 0.757819 110 8 0.764612 0.7043506 0.557440 0.903153 0.7241753 0.7868188 0.691346 0.841503 0.853734 0.784722 0.791038 0.494792 0.753443 0.8519345 0.7689209 0.5305977 0.5836324 0.731835 0.8254030 0.803891 0.846555 0.7524937 0.827329 0.804296 0.816384 0.828156 0.779945 0.860089 0.724413 0.7518059 0.8650776 0.775248 0.5916537 0.5496668 0.661651 6.2569e-01 0.57765489 0.7218060 0.7479603 0.762272 0.7274306 0.7477679 0.798999 0 0.787243 0.804878 -0.0266156 8 0.786314 0.755780 0.03053384 9.7002e-01 5.3358e-01 insignificant 1.0000000 1.0000000 insignificant 9.8097e-01 0.4907380 insignificant 1.0000e+00 1.00000 insignificant -0.04480094 0.3102179 insignificant 1 insignificant 0.787892 0.596010 0.1547605 8 0.734593 0.539635 0.1949587 1.1234e-05 9.9893e-01 weaklyHypermeth 2.8086e-04 1.0000e+00 weaklyHypermeth 1.3742e-02 9.8212e-01 weaklyHypermeth 2.8628e-01 1.0000e+00 insignificant 1.0453e-01 3.4469e-02 weaklyHypermeth 8.8381e-01 insignificant 0.786467 0.767635 1.3377e-02 8 0.695378 0.737508 -0.0421306 3.0337e-01 3.8383e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.7620e-01 1.9898e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0471724 2.5686e-01 insignificant 1.000000 insignificant 0.805031 0.596010 2.1007e-01 8 0.731214 0.5396346 0.1915793 3.0388e-08 9.9999e-01 hypermethylated 1.2155e-06 1.0000e+00 hypermethylated 1.2056e-03 9.9989e-01 weaklyHypermeth 3.6532e-02 1.0000e+00 weaklyHypermeth 0.1493339 9.0862e-04 weaklyHypermeth 3.9505e-02 weaklyHypermeth 0.805556 0.767635 0.0411150 8 0.758992 0.737508 0.02148346 2.6579e-03 0.8967526 weaklyHypermeth 1.3989e-01 1.0000 insignificant 6.2083e-02 0.9518121 insignificant 1.0000e+00 1 insignificant -0.00237141 0.92371466 insignificant 1.00000 insignificant 0.596754 0.766180 -0.1158352 8 0.6070889 0.704697 -0.09760778 8.8072e-01 2.7486e-03 weaklyHypometh 1.0000e+00 6.3921e-02 weaklyHypometh 8.8526e-01 9.0451e-03 weaklyHypometh 1.0000e+00 2.3193e-01 insignificant -0.1517053 1.1593e-03 weaklyHypometh 0.1096291 insignificant chr14 64292250 64293250 45570 PLEKHG3 ENSG00000126822 0.614698 96 6 0.6044457 110 6 0.5277778 30 4 0.710939 96 6 0.6093750 40 4 0.6822751 69 6 0.500077 50 6 0.580361 58 6 0.5631313 37 4 0.6111111 26 2 0.691648 128 4 0.683333 23 2 0.7184343 49 4 0.491667 39 3 0.8158730 27 3 0.8055556 12 0 0.6201923 27 2 0.683673 83 5 0.8240741 44 2 0.665739 44 4 0.633333 11 0 0.7000000 7 0 0.693939 43 6 0.485119 34 4 0.7486772 53 4 0.5724427 103 6 0.863492 23 3 0.5000000 19 0 0.4850340 62 6 0.699100 78 6 0.634123 79 4 0.488662 68 6 0.5453626 78 6 0.6565934 55 4 0.520223 87 6 0.5238095 20 2 0.5081699 67 4 0.6046584 77 4 0.6285862 93 6 0.7270623 106 6 0.6210317 136 6 0.7152381 52 4 0.617974 107 6 0.642908 0.5779524 0.513889 0.737227 0.7013889 0.7610229 0.600679 0.595403 0.635522 0.601852 0.714633 0.727160 0.761785 0.5314815 0.7714286 0.7777778 0.6411338 0.661376 0.7160494 0.786877 0.605486 0.7906717 0.678114 0.499669 0.792328 0.611919 0.877249 0.620370 0.608730 0.7115681 0.6141951 0.623126 0.5440917 0.6667684 0.497916 5.4497e-01 0.55620915 0.5539452 0.6345112 0.724163 0.6505732 0.7341944 0.644154 0 0.666359 0.686207 0.0050481 4 0.658855 0.518855 0.14000001 6.3443e-02 4.3811e-01 lowCoverage 1.0000000 1.0000000 lowCoverage 1.7875e-01 0.8827347 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.02489222 0.5545855 lowCoverage 1 lowCoverage 0.666667 0.583333 0.1126152 4 0.681549 0.605965 0.0755837 5.8899e-04 9.9615e-01 lowCoverage 1.2271e-02 1.0000e+00 lowCoverage 2.7442e-03 9.9889e-01 lowCoverage 7.2215e-02 1.0000e+00 lowCoverage 9.0416e-02 1.3972e-02 lowCoverage 4.3664e-01 lowCoverage 0.664498 0.708502 -2.7627e-02 6 0.628474 0.665810 -0.0373368 8.6217e-01 2.4906e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.2170e-01 5.6314e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0117594 7.2437e-01 lowCoverage 1.000000 lowCoverage 0.687392 0.583333 1.1721e-01 4 0.592977 0.6059650 -0.0129877 6.1007e-04 6.1539e-01 lowCoverage 1.2980e-02 1.0000e+00 lowCoverage 3.7453e-03 7.9318e-01 lowCoverage 9.1348e-02 1.0000e+00 lowCoverage 0.0655241 1.4363e-01 lowCoverage 1.0000e+00 lowCoverage 0.688696 0.708502 -0.0300052 4 0.608474 0.665810 -0.05733685 8.2889e-01 0.2421709 lowCoverage 1.0000e+00 1.0000 lowCoverage 6.7111e-01 0.5879092 lowCoverage 1.0000e+00 1 lowCoverage -0.03665159 0.40587001 lowCoverage 1.00000 lowCoverage 0.580052 0.708502 -0.1598086 4 0.5402925 0.665810 -0.12551783 9.9826e-01 4.3089e-03 lowCoverage 1.0000e+00 9.3672e-02 lowCoverage 9.9717e-01 7.5488e-03 lowCoverage 1.0000e+00 2.0969e-01 lowCoverage -0.1021757 1.5250e-02 lowCoverage 0.4236026 lowCoverage chr14 64766050 64767050 45598 ENSG00000222985 0.416075 448 9 0.3141079 174 10 0.5469300 198 11 0.490124 353 9 0.4000000 95 11 0.5133342 368 11 0.499358 200 11 0.419816 196 11 0.4101945 212 11 0.4318875 215 11 0.506517 298 11 0.649528 116 10 0.4275171 247 11 0.827778 35 6 0.4373760 257 11 0.5222296 122 11 0.5224208 159 9 0.264626 495 9 0.5086525 106 11 0.411547 428 11 0.547348 91 9 0.2551531 245 11 0.436452 255 11 0.379123 126 10 0.2600875 148 9 0.3421815 316 10 0.329161 164 11 0.3463922 83 7 0.3180764 173 11 0.355855 306 11 0.367499 252 11 0.355946 465 11 0.0491073 324 10 0.0195471 215 11 0.044256 306 7 0.0041322 140 10 0.0129870 153 10 0.0132332 320 11 0.1349949 564 11 0.2183463 481 10 0.2999334 381 9 0.2881197 403 10 0.231044 472 9 0.377952 0.2912232 0.495675 0.397059 0.4081633 0.4883102 0.477273 0.360609 0.394658 0.388887 0.457718 0.584022 0.415793 0.4864692 0.3955465 0.5232241 0.5194796 0.241880 0.4878848 0.367286 0.476957 0.1940643 0.384448 0.382910 0.250236 0.301907 0.269554 0.327006 0.308971 0.3256132 0.3411672 0.327634 0.0402076 0.0177329 0.040122 5.9137e-03 0.01712828 0.0128905 0.1278350 0.197972 0.2834285 0.2716548 0.185201 9 0.400466 0.296113 0.0758700 11 0.418580 0.343803 0.07477784 1.4854e-06 9.9999e-01 weaklyHypermeth 0.0014854 1.0000000 weaklyHypermeth 6.4411e-09 0.9999999 weaklyHypermeth 6.4411e-06 1.00000 weaklyHypermeth 0.11822811 0.0018326 weaklyHypermeth 1 insignificant 0.400466 0.026749 0.3665513 11 0.418580 0.024124 0.3944569 4.6481e-46 1.0000e+00 hypermethylated 1.5494e-43 1.0000e+00 hypermethylated 1.3017e-20 1.0000e+00 hypermethylated 4.3391e-18 1.0000e+00 hypermethylated 4.5212e-01 9.9076e-14 hypermethylated 3.3025e-11 hypermethylated 0.400466 0.225554 1.7668e-01 9 0.418580 0.237253 0.1813275 1.6119e-13 1.0000e+00 weaklyHypermeth 5.3731e-11 1.0000e+00 weaklyHypermeth 2.5645e-13 1.0000e+00 weaklyHypermeth 2.5645e-10 1.00000000 weaklyHypermeth 0.2415132 6.4177e-05 hypermethylated 0.032089 hypermethylated 0.296113 0.026749 2.7005e-01 11 0.343803 0.0241236 0.3196790 1.1441e-30 1.0000e+00 hypermethylated 2.8603e-28 1.0000e+00 hypermethylated 1.1823e-14 1.0000e+00 hypermethylated 3.9410e-12 1.0000e+00 hypermethylated 0.3338958 2.0974e-09 hypermethylated 5.2436e-07 hypermethylated 0.296113 0.225554 0.0895205 9 0.343803 0.237253 0.10654969 1.6714e-04 0.9999719 weaklyHypermeth 1.8571e-02 1.0000 weaklyHypermeth 2.0594e-04 0.9977766 weaklyHypermeth 3.4323e-02 1 weaklyHypermeth 0.12328514 0.00888752 weaklyHypermeth 0.96497 insignificant 0.026749 0.225554 -0.1881410 9 0.0241236 0.237253 -0.21312932 1.0000e+00 1.9126e-13 weaklyHypometh 1.0000e+00 2.7323e-11 weaklyHypometh 1.0000e+00 6.2744e-10 weaklyHypometh 1.0000e+00 2.0915e-07 weaklyHypometh -0.2106106 1.4276e-03 weaklyHypometh 0.1189655 insignificant chr14 67977650 67978650 45668 ENSG00000213482 0.634779 175 5 0.6067030 94 5 0.5252632 97 5 0.533333 71 3 0.5908964 61 5 0.6185239 171 5 0.508875 73 5 0.649744 64 5 0.4700000 76 5 0.7211111 55 5 0.665397 134 5 0.671282 54 5 0.6048077 75 5 NA 0 0 0.6088462 71 5 0.5256410 52 5 0.5897436 71 5 0.675797 114 5 0.5960000 75 5 0.672520 132 5 0.600000 16 0 0.7162393 54 5 0.592727 90 5 0.622711 41 5 0.5333333 20 3 0.6614772 127 5 0.712698 46 5 0.6904762 26 2 0.6728938 56 5 0.612566 134 5 0.694088 115 5 0.634839 249 5 0.5789916 72 5 0.4571861 105 5 0.500000 102 5 0.4733333 28 5 0.5600000 37 5 0.6218623 89 5 0.6242973 137 5 0.6151220 155 5 0.6503448 107 5 0.6477041 175 5 0.658725 110 5 0.632662 0.6033766 0.522015 0.540476 0.5889549 0.6154326 0.501907 0.644668 0.461724 0.718161 0.663394 0.663378 0.603017 NA 0.6061671 0.5285588 0.5875862 0.674365 0.5921379 0.666465 0.602299 0.7172414 0.584702 0.628698 0.535632 0.656138 0.713355 0.693432 0.666470 0.6048440 0.6890983 0.633082 0.5764996 0.4547037 0.504351 4.7011e-01 0.55684729 0.6108893 0.6221710 0.615360 0.6434721 0.6495367 0.656817 5 0.609913 0.644764 -0.0278670 5 0.616173 0.646713 -0.03054058 8.6615e-01 1.0905e-01 insignificant 1.0000000 1.0000000 insignificant 9.5207e-01 0.0326161 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.04169207 0.0710797 lowCoverage 1 lowCoverage 0.609913 0.533487 0.0786196 5 0.616173 0.539321 0.0768516 2.6041e-04 9.9951e-01 weaklyHypermeth 5.6610e-03 1.0000e+00 weaklyHypermeth 6.5553e-04 9.9997e-01 weaklyHypermeth 2.0485e-02 1.0000e+00 weaklyHypermeth 7.1750e-02 4.5067e-02 lowCoverage 1.0000e+00 lowCoverage 0.609913 0.609649 -2.6544e-02 5 0.616173 0.639197 -0.0230242 9.3626e-01 1.2453e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4324e-01 2.9046e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant -0.0355933 5.3077e-02 lowCoverage 1.000000 lowCoverage 0.644764 0.533487 1.0584e-01 5 0.646713 0.5393211 0.1073922 4.9898e-05 1.0000e+00 weaklyHypermeth 1.3131e-03 1.0000e+00 weaklyHypermeth 4.6232e-05 1.0000e+00 weaklyHypermeth 2.7195e-03 1.0000e+00 weaklyHypermeth 0.1134419 5.4677e-03 lowCoverage 2.0251e-01 lowCoverage 0.644764 0.609649 0.0012167 5 0.646713 0.639197 0.00751636 4.4578e-01 0.2901218 insignificant 1.0000e+00 1.0000 insignificant 3.3173e-01 0.4223328 insignificant 1.0000e+00 1 insignificant 0.00609882 0.74067538 lowCoverage 1.00000 lowCoverage 0.533487 0.609649 -0.1038614 5 0.5393211 0.639197 -0.09987585 9.9933e-01 1.3316e-06 weaklyHypometh 1.0000e+00 8.3222e-05 weaklyHypometh 9.9997e-01 4.9081e-05 weaklyHypometh 1.0000e+00 4.4619e-03 weaklyHypometh -0.1073431 8.4817e-03 weaklyHypometh 0.3029172 insignificant chr14 68020150 68021150 45675 ENSG00000213482 0.696362 292 9 0.6926063 118 8 0.6748233 96 9 0.703987 206 9 0.6194444 66 8 0.7277064 189 9 0.715882 116 8 0.651549 140 7 0.7268078 90 8 0.6217437 95 6 0.736262 187 9 0.782011 60 6 0.5411377 112 7 0.614286 17 2 0.7450273 143 7 0.7507937 68 6 0.7459716 68 6 0.646241 259 9 0.6418814 136 7 0.779138 221 7 0.562698 32 4 0.8799629 53 5 0.598683 165 9 0.721919 68 6 0.9470899 44 5 0.6975300 158 9 0.693549 103 6 0.7414966 34 3 0.7224545 122 6 0.827144 155 9 0.765454 117 9 0.735158 249 7 0.7161763 107 5 0.6701720 75 6 0.663102 168 9 0.7539683 54 5 0.6777778 57 5 0.6751452 175 9 0.7142188 268 9 0.7271044 325 9 0.7332373 222 9 0.8426616 206 7 0.874542 287 9 0.847405 0.7216802 0.697620 0.807604 0.6361053 0.8111862 0.807381 0.810459 0.732260 0.730911 0.789553 0.805882 0.754471 0.7499897 0.7911807 0.8684641 0.7214432 0.800725 0.7416652 0.833021 0.681781 0.8386587 0.789978 0.815518 0.965686 0.762426 0.747135 0.833090 0.747087 0.8011968 0.8072002 0.783221 0.7615721 0.7299982 0.711996 7.4708e-01 0.69689542 0.7400365 0.8151596 0.789848 0.8389465 0.8518468 0.904562 4 0.774169 0.788462 -0.0079153 7 0.729119 0.660690 0.06842945 8.5493e-01 6.2763e-01 insignificant 1.0000000 1.0000000 insignificant 9.8591e-01 0.4290007 insignificant 1.0000e+00 1.00000 insignificant -0.05041199 0.1585149 insignificant 1 insignificant 0.776524 0.716981 0.0694836 7 0.723692 0.673928 0.0497637 8.0813e-04 9.8480e-01 weaklyHypermeth 1.6492e-02 1.0000e+00 weaklyHypermeth 1.3229e-01 8.8797e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -2.0406e-03 9.2065e-01 insignificant 1.0000e+00 insignificant 0.775487 0.844037 -5.9888e-02 9 0.723425 0.750140 -0.0267152 9.9278e-01 1.4896e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9702e-01 6.5001e-03 weaklyHypometh 1.0000e+00 0.72223453 insignificant -0.0876698 5.5014e-02 insignificant 1.000000 insignificant 0.789799 0.716981 7.4123e-02 7 0.749962 0.6739283 0.0760339 1.6689e-03 9.9971e-01 weaklyHypermeth 3.2511e-02 1.0000e+00 weaklyHypermeth 3.4885e-02 9.9958e-01 weaklyHypermeth 6.3427e-01 1.0000e+00 insignificant 0.0483714 1.7762e-01 insignificant 1.0000e+00 insignificant 0.788743 0.844037 -0.0447073 7 0.659060 0.750140 -0.09107992 9.9897e-01 0.1159827 insignificant 1.0000e+00 1.0000 insignificant 9.8545e-01 0.5911982 insignificant 1.0000e+00 1 insignificant -0.03725780 0.43012001 insignificant 1.00000 insignificant 0.716981 0.845211 -0.1180555 7 0.6739283 0.805727 -0.13179826 1.0000e+00 2.9466e-05 weaklyHypometh 1.0000e+00 1.2811e-03 weaklyHypometh 9.9994e-01 6.6535e-03 weaklyHypometh 1.0000e+00 1.9902e-01 insignificant -0.0856292 6.0184e-02 insignificant 1.0000000 insignificant chr14 68020750 68021750 45676 ENSG00000213482 0.719718 302 10 0.7154510 156 9 0.7073410 101 10 0.714838 222 10 0.6575000 73 9 0.7271579 207 10 0.735203 127 9 0.686394 150 8 0.7541270 94 8 0.6508403 96 6 0.762636 197 10 0.782011 60 6 0.5870239 115 7 0.662500 19 2 0.7450273 143 7 0.7507937 68 6 0.7459716 68 6 0.675721 264 10 0.6776933 138 7 0.791224 231 8 0.556429 34 4 0.8949675 54 5 0.632126 183 10 0.747199 70 6 0.8523810 45 5 0.7111104 176 10 0.724194 108 7 0.7529762 40 4 0.7502091 126 6 0.840441 177 10 0.788909 130 10 0.755760 266 8 0.7327940 124 6 0.6920437 84 7 0.696792 173 10 0.7539683 54 5 0.7100000 61 5 0.7076307 193 10 0.7401989 294 10 0.7543940 350 10 0.7447148 253 10 0.8426616 206 7 0.880566 333 10 0.847405 0.7216802 0.697620 0.807604 0.6361053 0.8111862 0.807381 0.810459 0.732260 0.730911 0.789553 0.805882 0.754471 0.7499897 0.7911807 0.8684641 0.7214432 0.800725 0.7416652 0.833021 0.681781 0.8386587 0.789978 0.815518 0.965686 0.762426 0.747135 0.833090 0.747087 0.8011968 0.8072002 0.783221 0.7615721 0.7299982 0.711996 7.4708e-01 0.69689542 0.7400365 0.8151596 0.789848 0.8389465 0.8518468 0.904562 4 0.781703 0.799858 -0.0088133 8 0.741476 0.679029 0.06244708 8.8774e-01 6.0573e-01 insignificant 1.0000000 1.0000000 insignificant 9.7230e-01 0.5078744 insignificant 1.0000e+00 1.00000 insignificant -0.03809987 0.2096213 insignificant 1 insignificant 0.783986 0.734398 0.0627296 8 0.742770 0.700875 0.0418951 1.7074e-03 9.6481e-01 weaklyHypermeth 3.1619e-02 1.0000e+00 weaklyHypermeth 1.3938e-01 9.1967e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -3.0795e-03 8.3734e-01 insignificant 1.0000e+00 insignificant 0.782979 0.853064 -5.8321e-02 10 0.739346 0.766404 -0.0270588 9.9554e-01 1.5065e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9387e-01 1.1049e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant -0.0800485 4.7087e-02 weaklyHypometh 1.000000 insignificant 0.801140 0.734398 6.7761e-02 8 0.768544 0.7008751 0.0676689 2.8358e-03 9.9925e-01 weaklyHypermeth 4.9750e-02 1.0000e+00 weaklyHypermeth 5.4686e-02 9.9830e-01 insignificant 9.2688e-01 1.0000e+00 insignificant 0.0350204 2.3960e-01 insignificant 1.0000e+00 insignificant 0.800142 0.853064 -0.0419804 8 0.682120 0.766404 -0.08428431 9.9888e-01 0.1342386 insignificant 1.0000e+00 1.0000 insignificant 9.8764e-01 0.6170839 insignificant 1.0000e+00 1 insignificant -0.04194859 0.31046984 insignificant 1.00000 insignificant 0.734398 0.854152 -0.1091217 8 0.7008751 0.819685 -0.11881006 9.9999e-01 5.5294e-05 weaklyHypometh 1.0000e+00 2.1666e-03 weaklyHypometh 9.9975e-01 1.1570e-02 weaklyHypometh 1.0000e+00 2.7607e-01 insignificant -0.0769689 5.4019e-02 insignificant 1.0000000 insignificant chr14 68083650 68084650 45683 ENSG00000213482 0.845774 336 6 0.8375833 619 8 0.6720041 190 7 0.911646 326 6 0.8701583 165 5 0.9114500 220 5 0.879040 146 6 0.833621 334 7 0.5798968 104 3 0.8698330 99 4 0.655883 336 6 0.586207 57 2 0.7111846 149 5 0.778284 135 4 0.8773148 61 3 0.5405644 98 2 0.9136454 416 4 0.668029 224 5 0.6085134 442 6 0.871528 196 4 0.828754 112 5 0.8250000 72 3 0.831198 227 6 0.536473 131 6 0.8649832 65 7 0.8687821 451 8 0.539084 122 5 0.4558700 77 2 0.9560847 181 5 0.908434 485 8 0.764704 505 8 0.876393 264 6 0.2548369 420 8 0.0782828 156 8 0.289825 363 6 0.3333333 15 1 0.2075804 365 8 0.2572404 453 8 0.8758254 202 5 0.8283846 298 8 0.8835370 281 5 0.6512821 71 2 0.875761 250 7 0.752347 0.5873661 0.536719 0.913356 0.7769407 0.8080846 0.837873 0.716873 0.610276 0.687389 0.782488 0.561923 0.488693 0.5384971 0.6787950 0.5419554 0.7026889 0.635213 0.5990403 0.743552 0.654415 0.6097964 0.681432 0.518771 0.825864 0.753762 0.534177 0.656731 0.852374 0.8561083 0.7797164 0.790744 0.0991267 0.0160051 0.052119 6.4789e-01 0.21396620 0.2343275 0.7431471 0.949360 0.8286234 0.4820693 0.724748 1 0.779497 0.826895 -0.0447363 6 0.852162 0.838899 0.01326280 8.9352e-01 7.0620e-02 insignificant 1.0000000 1.0000000 insignificant 6.3498e-01 0.2242582 insignificant 1.0000e+00 1.00000 insignificant -0.00020541 0.9970967 lowCoverage 1 lowCoverage 0.779450 0.178894 0.6306917 6 0.835735 0.234102 0.6016332 1.5537e-47 1.0000e+00 hypermethylated 7.7684e-45 1.0000e+00 hypermethylated 9.9050e-15 1.0000e+00 hypermethylated 2.4763e-12 1.0000e+00 hypermethylated 5.3426e-01 6.4066e-08 lowCoverage 4.9281e-06 lowCoverage 0.779450 0.808530 4.9959e-03 5 0.835735 0.852936 -0.0172007 9.4810e-01 3.7577e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9797e-01 2.5458e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0518500 3.5347e-01 lowCoverage 1.000000 lowCoverage 0.826830 0.178894 6.7825e-01 8 0.820999 0.2341020 0.5868968 9.7404e-42 1.0000e+00 hypermethylated 3.2468e-39 1.0000e+00 hypermethylated 5.9914e-12 1.0000e+00 hypermethylated 1.1983e-09 1.0000e+00 hypermethylated 0.5344637 1.3965e-07 hypermethylated 1.7456e-05 hypermethylated 0.826830 0.808530 0.0566553 5 0.820999 0.852936 -0.03193715 1.0328e-01 0.4200220 insignificant 1.0000e+00 1.0000 insignificant 8.6946e-01 0.3780535 insignificant 1.0000e+00 1 insignificant -0.05164455 0.44109016 insignificant 1.00000 insignificant 0.178894 0.808530 -0.6375359 5 0.2341020 0.852936 -0.61883391 1.0000e+00 6.2273e-23 hypomethylated 1.0000e+00 1.5568e-20 hypomethylated 1.0000e+00 2.5606e-09 hypomethylated 1.0000e+00 6.4014e-07 hypomethylated -0.5861082 5.6224e-06 hypomethylated 0.0028112 hypomethylated chr14 68085850 68086850 45684 ENSG00000213482 0.866219 391 12 0.7502613 167 9 0.7389317 132 12 0.754531 206 12 0.8019687 113 12 0.7677906 350 12 0.743620 135 12 0.827086 175 9 0.7354199 106 9 0.8145910 86 11 0.796198 304 12 0.706205 79 7 0.8087123 179 12 0.801587 40 6 0.8369748 147 12 0.7991342 92 7 0.7837963 91 7 0.812077 270 12 0.7812148 199 12 0.785304 300 12 0.902778 30 2 0.8018519 75 5 0.816097 222 12 0.805983 64 8 0.7917208 101 12 0.7401634 284 12 0.769490 107 8 0.6410256 63 5 0.8387697 154 9 0.759946 154 12 0.849442 207 12 0.823746 402 12 0.7104620 187 12 0.7685648 144 12 0.745980 191 12 0.7970779 74 7 0.6744009 126 12 0.6753882 212 12 0.7878199 378 12 0.8045860 398 12 0.8488177 261 12 0.8230872 260 12 0.832940 338 12 0.831861 0.8274304 0.763380 0.857932 0.7403251 0.8280860 0.761286 0.819511 0.800114 0.824052 0.788576 0.772247 0.835897 0.8215656 0.8614238 0.7873592 0.8059119 0.818360 0.7833580 0.814328 0.852830 0.8241719 0.815761 0.830314 0.801235 0.822947 0.759099 0.774439 0.864604 0.7981651 0.8227396 0.816805 0.7368964 0.7642571 0.743126 8.1083e-01 0.71511767 0.7199791 0.8046088 0.826228 0.8584093 0.8658013 0.857745 4 0.809216 0.802469 0.0030553 12 0.797348 0.834737 -0.03738933 8.2493e-01 6.6298e-01 insignificant 1.0000000 1.0000000 insignificant 9.6901e-01 0.2436979 insignificant 1.0000e+00 1.00000 insignificant -0.00950323 0.6526183 insignificant 1 insignificant 0.809994 0.726981 0.0788697 12 0.799096 0.737460 0.0616361 2.3037e-08 9.9736e-01 weaklyHypermeth 8.2274e-07 1.0000e+00 weaklyHypermeth 1.9383e-05 9.9958e-01 weaklyHypermeth 1.0768e-03 1.0000e+00 weaklyHypermeth 5.6936e-02 3.8627e-02 weaklyHypermeth 9.4212e-01 insignificant 0.809994 0.839755 -1.3577e-02 12 0.799096 0.824741 -0.0256445 9.2826e-01 2.5253e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7989e-01 3.4863e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0338690 3.3567e-02 weaklyHypometh 1.000000 insignificant 0.802376 0.726981 7.8820e-02 12 0.809528 0.7374601 0.0720683 3.0191e-06 9.9960e-01 weaklyHypermeth 9.7389e-05 1.0000e+00 weaklyHypermeth 5.9523e-05 1.0000e+00 weaklyHypermeth 3.0320e-03 1.0000e+00 weaklyHypermeth 0.0664387 3.3249e-02 weaklyHypermeth 8.1096e-01 insignificant 0.802376 0.839755 -0.0154167 12 0.809528 0.824741 -0.01521235 9.4526e-01 0.2753233 insignificant 1.0000e+00 1.0000 insignificant 7.0304e-01 0.7389729 insignificant 1.0000e+00 1 insignificant -0.02436580 0.27705118 insignificant 1.00000 insignificant 0.726981 0.839755 -0.0922872 12 0.7374601 0.824741 -0.08728067 1.0000e+00 2.8235e-06 weaklyHypometh 1.0000e+00 1.6609e-04 weaklyHypometh 1.0000e+00 4.5826e-05 weaklyHypometh 1.0000e+00 4.4619e-03 weaklyHypometh -0.0908045 5.1750e-03 weaklyHypometh 0.2156247 insignificant chr14 68100350 68101350 45686 ENSG00000213482 0.885154 155 4 0.6023464 80 4 0.7736793 62 4 0.852743 172 5 0.9666667 34 3 0.8284828 151 5 0.831140 63 3 0.736254 112 5 0.7704575 50 3 0.9666667 43 4 0.880635 111 5 0.780000 45 2 0.7619048 51 3 0.666667 5 0 0.8684211 47 3 0.6944444 27 3 0.8181818 22 2 0.823993 138 4 0.7450292 65 4 0.851047 104 5 0.765714 33 4 0.9250000 42 4 0.797980 63 3 0.708333 27 3 0.6658301 106 5 0.9192396 125 5 0.897619 64 4 1.0000000 43 2 0.9238095 65 4 0.798439 74 5 0.921832 95 5 0.963841 120 4 0.8877005 46 3 0.5807246 75 5 0.960526 48 2 0.9166667 31 4 0.7361111 67 4 0.8660244 124 5 0.7462963 121 3 0.6381560 123 4 0.8027052 125 4 0.8674774 140 3 0.729941 145 4 0.933225 0.6816124 0.836684 0.923073 0.9395870 0.8860708 0.920315 0.918191 0.915532 0.998182 0.930509 0.949091 0.949784 0.9166057 0.9289474 0.8490820 0.8198618 0.888495 0.9673578 0.934054 0.735974 0.9795455 0.957163 0.964963 0.910309 0.928683 0.918953 0.997525 0.977489 0.8958169 0.9006661 0.963952 0.8927078 0.6103755 0.879090 8.5742e-01 0.92833333 0.8939035 0.9863636 0.750257 0.9379773 0.9761787 0.946124 2 0.877604 0.894118 -0.0300220 4 0.893524 0.931342 -0.03781817 1.0000e+00 7.1162e-01 lowCoverage 1.0000000 1.0000000 lowCoverage 1.0000e+00 0.6576533 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.05210756 0.1733018 lowCoverage 1 lowCoverage 0.877445 0.794872 0.0260512 4 0.869862 0.859945 0.0099175 2.3399e-01 1.8562e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.7784e-01 2.8913e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -1.9430e-02 7.6134e-01 lowCoverage 1.0000e+00 lowCoverage 0.877204 0.888379 2.3074e-02 4 0.853595 0.703404 0.1501918 2.9212e-02 5.5122e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 5.9953e-01 3.9128e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 0.0482805 3.0536e-01 lowCoverage 1.000000 lowCoverage 0.892941 0.792839 7.2349e-02 5 0.899476 0.7739505 0.1255257 2.6246e-01 7.1331e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.4923e-01 9.1139e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0326776 6.3080e-01 lowCoverage 1.0000e+00 lowCoverage 0.893491 0.888379 0.0649202 4 0.905595 0.703404 0.20219178 1.5059e-02 0.8973452 lowCoverage 5.5774e-01 1.0000 lowCoverage 1.1663e-01 0.9761110 lowCoverage 1.0000e+00 1 lowCoverage 0.10038803 0.06972042 lowCoverage 1.00000 lowCoverage 0.793814 0.889571 0.0158954 4 0.8199293 0.732461 0.08746818 1.3815e-03 2.9027e-01 lowCoverage 1.7269e-01 1.0000e+00 lowCoverage 2.2720e-01 5.2989e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0677105 3.5566e-01 lowCoverage 1.0000000 lowCoverage chr14 68163950 68164950 45693 ENSG00000213482 0.021932 704 17 0.0137255 331 17 0.1391490 415 17 0.096174 291 16 0.0352941 202 17 0.0090902 820 17 0.038874 484 17 0.076002 314 17 0.0038382 445 17 0.0156486 394 17 0.015180 517 17 0.048635 507 16 0.0343298 469 17 0.041667 24 2 0.1472317 342 17 0.0216302 430 17 0.0085832 469 17 0.043422 431 16 0.0238876 256 15 0.027282 711 17 0.013258 223 15 0.0658761 247 12 0.047350 580 17 0.000000 200 13 0.0396711 120 8 0.3617171 330 17 0.014382 251 13 0.1091036 156 12 0.0744631 253 16 0.285018 430 17 0.030523 460 17 0.023151 1090 17 0.4942542 208 12 0.6571406 236 15 0.779015 335 16 0.4777857 207 16 0.6128618 98 8 0.1244710 374 17 0.0792115 736 17 0.0389696 520 17 0.1559435 429 14 0.0557208 568 17 0.072654 596 16 0.028891 0.0074713 0.130779 0.094173 0.0165517 0.0096835 0.036913 0.057705 0.004197 0.009129 0.014644 0.043213 0.036529 NA 0.1361425 0.0175504 0.0099459 0.031909 0.0143302 0.022895 0.010357 0.0302546 0.048400 0.000000 0.038190 0.324032 0.022866 0.119049 0.065757 0.2607699 0.0374951 0.018279 0.4598580 0.5890935 0.715585 3.9571e-01 0.57203065 0.1198034 0.0594054 0.028550 0.1384300 0.0472009 0.061910 10 0.037751 0.082028 -0.0442218 17 0.039435 0.085900 -0.04646462 1.0000e+00 5.7708e-06 weaklyHypometh 1.0000000 0.0057708 weaklyHypometh 9.4940e-01 0.2586098 insignificant 1.0000e+00 1.00000 insignificant -0.04563062 0.2080315 insignificant 1 insignificant 0.037751 0.456104 -0.4176645 17 0.039435 0.495844 -0.4564092 1.0000e+00 3.0171e-78 hypomethylated 1.0000e+00 3.0171e-75 hypomethylated 1.0000e+00 1.0389e-38 hypomethylated 1.0000e+00 1.0389e-35 hypomethylated -4.8118e-01 3.2428e-03 weaklyHypometh 1.2472e-01 insignificant 0.037751 0.084240 -3.9321e-02 17 0.039435 0.074204 -0.0347692 9.9599e-01 1.5655e-09 weaklyHypometh 1.0000e+00 1.5655e-06 weaklyHypometh 9.8059e-01 6.0657e-07 weaklyHypometh 1.0000e+00 0.00060657 weaklyHypometh -0.0374210 1.4334e-01 insignificant 1.000000 insignificant 0.082028 0.456104 -3.7275e-01 17 0.085900 0.4958442 -0.4099446 1.0000e+00 4.5775e-34 hypomethylated 1.0000e+00 4.5775e-31 hypomethylated 1.0000e+00 3.4763e-26 hypomethylated 1.0000e+00 3.4763e-23 hypomethylated -0.4355452 3.7531e-03 weaklyHypometh 1.4435e-01 insignificant 0.082028 0.084240 0.0081967 17 0.085900 0.074204 0.01169540 2.4794e-01 0.9377030 insignificant 1.0000e+00 1.0000 insignificant 8.5599e-01 0.0173584 inconclusive 1.0000e+00 1 insignificant 0.00820964 0.83519311 insignificant 1.00000 insignificant 0.456104 0.084240 0.3936636 17 0.4958442 0.074204 0.42163997 1.1647e-19 1.0000e+00 hypermethylated 1.1647e-16 1.0000e+00 hypermethylated 1.1455e-16 1.0000e+00 hypermethylated 1.1455e-13 1.0000e+00 hypermethylated 0.4437549 4.1543e-03 weaklyHypermeth 0.2014734 insignificant chr14 68231150 68232150 45702 ENSG00000213482 0.938636 86 5 0.7941188 144 5 0.5444444 63 4 0.960000 78 5 0.6333333 27 4 0.8602439 156 5 0.400000 18 1 0.859436 98 5 0.6750000 32 4 0.8412338 61 5 0.835985 99 5 0.750000 18 1 0.8998496 134 5 0.757802 70 5 0.5704615 101 5 0.5333333 22 3 0.3333333 10 1 0.502564 133 5 0.8118182 84 5 0.818503 84 5 0.910000 35 5 0.9418182 52 5 0.842857 20 1 0.660000 35 4 0.6700000 27 4 0.9069048 154 5 0.813095 39 5 0.5208333 20 2 0.8788871 128 5 0.895554 164 5 0.946215 144 5 0.891786 131 5 0.0328173 152 5 0.0285714 37 5 1.000000 2 0 0.0000000 18 3 0.0509136 124 5 0.1285714 132 4 0.8033333 22 2 0.7846154 47 3 0.8266667 36 3 0.5000000 7 0 0.866667 46 4 0.937500 0.7673384 0.526749 0.959259 0.5493827 0.8641373 0.402778 0.842792 0.678241 0.810095 0.802539 0.719701 0.871540 0.7518926 0.5606553 0.5432099 0.5316602 0.501289 0.7898148 0.838414 0.918981 0.9222222 0.869048 0.709259 0.654630 0.900243 0.828153 0.741014 0.883450 0.8764243 0.9354720 0.860847 0.0366357 0.0423280 0.502221 0.0000e+00 0.06966276 0.1904762 0.8209877 0.789886 0.8296296 0.4656636 0.876543 0 0.780632 0.890411 -0.1109917 5 0.763643 0.875504 -0.11186139 9.9999e-01 2.3144e-04 weaklyHypometh 1.0000000 0.0871050 weaklyHypometh 9.9996e-01 0.0004693 weaklyHypometh 1.0000e+00 0.46930 insignificant -0.10715770 0.0666290 lowCoverage 1 lowCoverage 0.780632 0.047312 0.7318363 5 0.763643 0.062046 0.7015972 1.7963e-34 1.0000e+00 hypermethylated 3.5927e-32 1.0000e+00 hypermethylated 5.7835e-09 1.0000e+00 hypermethylated 6.4261e-07 1.0000e+00 hypermethylated 5.0919e-01 2.3019e-02 lowCoverage 6.3942e-01 lowCoverage 0.780632 0.860759 -7.8496e-02 3 0.763643 0.816364 -0.0527208 8.1589e-01 4.4719e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.5188e-01 7.1330e-02 lowCoverage 1.0000e+00 1.00000000 lowCoverage -0.0402516 6.1676e-01 lowCoverage 1.000000 lowCoverage 0.890411 0.047312 8.4266e-01 5 0.875504 0.0620456 0.8134586 1.1771e-46 1.0000e+00 hypermethylated 1.1771e-43 1.0000e+00 hypermethylated 9.9138e-09 1.0000e+00 hypermethylated 1.1015e-06 1.0000e+00 hypermethylated 0.6163502 1.0773e-02 lowCoverage 3.3666e-01 lowCoverage 0.890411 0.860759 0.0318384 3 0.875504 0.816364 0.05914055 4.7110e-02 0.5170392 lowCoverage 1.0000e+00 1.0000 lowCoverage 1.4720e-01 0.7245089 lowCoverage 1.0000e+00 1 lowCoverage 0.06690612 0.40877273 lowCoverage 1.00000 lowCoverage 0.047312 0.860759 -0.8156450 3 0.0620456 0.816364 -0.75431807 1.0000e+00 1.8847e-24 lowCoverage 1.0000e+00 1.8847e-21 lowCoverage 1.0000e+00 3.3287e-06 lowCoverage 1.0000e+00 4.1609e-04 lowCoverage -0.5494441 1.6689e-02 lowCoverage 0.4279219 lowCoverage chr14 68299050 68300050 45712 ENSG00000207089 0.368880 247 5 0.2483297 197 5 0.3376126 148 5 0.363277 234 5 0.3998784 100 4 0.3387775 402 5 0.391326 131 4 0.212799 164 5 0.2360705 273 5 0.2868977 156 5 0.454711 191 5 0.127946 100 5 0.0708953 252 5 0.297802 102 4 0.2424359 240 5 0.3175905 67 4 0.1536859 141 5 0.398515 265 5 0.0891204 102 4 0.123390 314 5 0.603763 96 5 0.0962934 231 5 0.517080 169 5 0.318434 159 5 0.3759588 113 5 0.2097423 274 5 0.302168 160 5 0.3980392 82 4 0.2895846 166 6 0.163525 285 5 0.232170 252 5 0.511640 358 5 0.1044706 239 5 0.0603060 131 4 0.031311 119 5 0.8123317 75 3 0.2118687 164 5 0.7445255 175 5 0.3025178 342 5 0.2527981 237 5 0.1694749 203 4 0.0547494 288 5 0.197321 257 5 0.353839 0.2819294 0.346648 0.307320 0.3697273 0.3412963 0.347455 0.215729 0.226523 0.298869 0.471259 0.141172 0.097071 0.3401396 0.2454908 0.3277597 0.1654008 0.309823 0.1209903 0.125571 0.577934 0.0898290 0.481538 0.321722 0.369077 0.211662 0.323810 0.453830 0.387842 0.1520607 0.2278377 0.512449 0.1000226 0.0624127 0.034249 6.7502e-01 0.05893083 0.8316147 0.1672321 0.259854 0.1738637 0.0313958 0.244138 4 0.253006 0.294243 -0.0481031 5 0.257241 0.288006 -0.03076420 9.8672e-01 6.8166e-02 insignificant 1.0000000 1.0000000 insignificant 9.9888e-01 0.0689161 insignificant 1.0000e+00 1.00000 insignificant -0.06186960 0.2408432 lowCoverage 1 lowCoverage 0.253006 0.258029 -0.0200729 5 0.257241 0.300975 -0.0437336 6.8815e-01 4.7994e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.2825e-01 9.0635e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -5.4472e-02 7.2577e-01 lowCoverage 1.0000e+00 lowCoverage 0.253006 0.148455 1.0634e-01 5 0.257241 0.216474 0.0407670 3.6004e-04 9.9334e-01 weaklyHypermeth 3.2731e-02 1.0000e+00 weaklyHypermeth 9.9057e-04 9.9371e-01 weaklyHypermeth 9.9057e-02 1.00000000 weaklyHypermeth 0.0776247 1.5618e-01 lowCoverage 1.000000 lowCoverage 0.294243 0.258029 2.8289e-02 5 0.288006 0.3009751 -0.0129694 3.4078e-01 8.2170e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.6761e-01 9.8545e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0073977 9.6269e-01 lowCoverage 1.0000e+00 lowCoverage 0.294243 0.148455 0.1519184 5 0.288006 0.216474 0.07153123 8.4983e-04 0.9953147 weaklyHypermeth 5.3114e-02 1.0000 weaklyHypermeth 1.0251e-03 0.9996754 weaklyHypermeth 1.2814e-01 1 insignificant 0.13949427 0.04060749 lowCoverage 1.00000 lowCoverage 0.258029 0.148455 0.1253765 5 0.3009751 0.216474 0.08450063 1.8758e-01 9.6448e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.8457e-01 8.9891e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.1320966 4.1631e-01 lowCoverage 1.0000000 lowCoverage chr14 68343050 68344050 45715 C14orf181 ENSG00000221899 0.844302 246 5 0.7076299 237 5 0.5516054 137 5 0.864022 197 5 0.7495758 106 5 0.7583065 273 5 0.787325 104 5 0.838137 153 5 0.6975257 152 5 0.8671304 92 5 0.829520 182 5 0.901552 76 3 0.7620369 200 5 0.710043 76 4 0.7690960 179 5 0.8611722 59 2 0.7416667 18 1 0.591901 248 5 0.7846320 172 5 0.633615 164 4 0.687473 78 5 0.6029910 96 5 0.821885 105 5 0.737697 103 4 0.7031968 88 5 0.8145072 269 5 0.813805 81 2 0.9320215 103 2 0.8634681 191 5 0.873210 272 5 0.832059 241 5 0.858149 206 5 0.1095528 250 5 0.0000000 97 5 0.000000 54 1 0.0535714 36 4 0.0805126 184 5 0.0734382 217 5 0.8276308 159 5 0.4973898 172 5 0.7749452 164 5 0.5751573 139 5 0.654598 119 5 0.846631 0.7400127 0.589302 0.857358 0.8270662 0.8117513 0.781743 0.785343 0.723833 0.731615 0.833755 0.803261 0.802763 0.7816348 0.7524623 0.8138634 0.7641647 0.537842 0.7695581 0.757755 0.657677 0.6049997 0.832126 0.815025 0.753710 0.816875 0.759082 0.863348 0.792438 0.8669328 0.8251956 0.812212 0.0502442 0.0000000 NA 1.3194e-02 0.03333926 0.0345478 0.8187942 0.590032 0.7604146 0.6224870 0.623664 2 0.764897 0.807420 -0.0427410 5 0.756780 0.809451 -0.05267150 9.9538e-01 7.3725e-03 weaklyHypometh 1.0000000 0.7372512 insignificant 9.6330e-01 0.1211537 insignificant 1.0000e+00 1.00000 insignificant -0.03249869 0.3530712 lowCoverage 1 lowCoverage 0.764897 0.045346 0.7196459 5 0.756780 0.078974 0.6778054 1.5586e-50 1.0000e+00 hypermethylated 1.5586e-47 1.0000e+00 hypermethylated 1.1844e-12 1.0000e+00 hypermethylated 1.9740e-10 1.0000e+00 hypermethylated 7.0969e-01 6.8173e-16 lowCoverage 3.4086e-13 lowCoverage 0.764897 0.682603 8.0358e-02 5 0.756780 0.664433 0.0923470 8.5387e-04 9.9622e-01 weaklyHypermeth 7.1156e-02 1.0000e+00 weaklyHypermeth 7.3119e-03 9.8986e-01 weaklyHypermeth 4.3011e-01 1.00000000 insignificant 0.0965956 1.9570e-01 lowCoverage 1.000000 lowCoverage 0.807420 0.045346 7.6182e-01 5 0.809451 0.0789745 0.7304770 5.8777e-44 1.0000e+00 hypermethylated 2.9389e-41 1.0000e+00 hypermethylated 1.7769e-11 1.0000e+00 hypermethylated 2.9614e-09 1.0000e+00 hypermethylated 0.7421927 1.3022e-13 lowCoverage 6.5111e-11 lowCoverage 0.807420 0.682603 0.1242879 5 0.809451 0.664433 0.14501851 4.0510e-05 0.9999830 weaklyHypermeth 5.0637e-03 1.0000 weaklyHypermeth 7.0718e-03 0.9997564 weaklyHypermeth 5.0513e-01 1 insignificant 0.12909433 0.10486622 lowCoverage 1.00000 lowCoverage 0.045346 0.682603 -0.6352435 5 0.0789745 0.664433 -0.58545844 1.0000e+00 6.6688e-20 hypomethylated 1.0000e+00 1.3338e-17 hypomethylated 1.0000e+00 2.8010e-07 hypomethylated 1.0000e+00 4.6684e-05 hypomethylated -0.6130983 2.8463e-04 lowCoverage 0.0711570 lowCoverage chr14 68352350 68353350 45717 C14orf181 ENSG00000221899 0.078330 2546 50 0.0875300 1450 51 0.0806186 1881 50 0.074152 2061 46 0.1030932 1382 51 0.1272473 2592 50 0.113768 2089 50 0.080675 1489 51 0.0775237 2297 50 0.1100116 1858 49 0.086650 1844 50 0.084511 2080 49 0.1158861 1777 48 0.213686 449 22 0.0782172 2119 49 0.0836310 1990 49 0.0264105 1733 48 0.121084 2293 45 0.0570148 1063 49 0.108520 2003 49 0.146461 750 48 0.0823904 1021 36 0.093218 1702 50 0.112373 762 45 0.1488691 1112 34 0.0982548 2217 50 0.099717 1199 47 0.0698199 747 48 0.1119095 1288 50 0.120780 2132 50 0.066823 2004 50 0.120094 2426 50 0.0440432 1547 51 0.0231762 1304 50 0.039562 1203 39 0.0230339 907 35 0.0514056 715 50 0.0458463 1701 50 0.1165275 3002 50 0.1497606 2530 50 0.0691084 2520 40 0.0763134 2566 47 0.092791 2589 38 0.064779 0.0837535 0.083393 0.064173 0.1076230 0.0839191 0.124193 0.053490 0.062482 0.083201 0.079802 0.079067 0.099557 0.0944067 0.0703504 0.0822122 0.0468883 0.053876 0.0526234 0.059813 0.090841 0.0282305 0.089086 0.092591 0.100416 0.100852 0.081027 0.061182 0.087087 0.0863919 0.0409150 0.108335 0.0042061 0.0073122 0.031693 1.0614e-02 0.02869031 0.0231251 0.0935135 0.096847 0.0545507 0.0515410 0.061489 34 0.064874 0.087132 -0.0096024 50 0.126073 0.125059 0.00101426 9.9990e-01 4.0314e-02 weaklyHypometh 1.0000000 1.0000000 insignificant 8.2012e-01 0.7540936 insignificant 1.0000e+00 1.00000 insignificant -0.01046435 0.3558662 insignificant 1 insignificant 0.064832 0.026298 0.0556719 50 0.097621 0.041653 0.0559677 1.8886e-29 1.0000e+00 weaklyHypermeth 2.6980e-27 1.0000e+00 weaklyHypermeth 4.9316e-25 1.0000e+00 weaklyHypermeth 4.9316e-22 1.0000e+00 weaklyHypermeth 5.7584e-02 3.2984e-06 weaklyHypermeth 2.3560e-04 weaklyHypermeth 0.064794 0.072711 -1.9041e-03 47 0.106167 0.138676 -0.0325099 1.2205e-01 1.0642e-04 weaklyHypometh 1.0000e+00 2.6606e-02 weaklyHypometh 4.4645e-02 4.0225e-01 inconclusive 1.0000e+00 1.00000000 insignificant -0.0054721 7.5452e-01 insignificant 1.000000 insignificant 0.087062 0.026298 6.9979e-02 50 0.111173 0.0416529 0.0695199 8.9537e-26 1.0000e+00 weaklyHypermeth 1.1192e-23 1.0000e+00 weaklyHypermeth 7.7307e-18 1.0000e+00 weaklyHypermeth 3.8654e-15 1.0000e+00 weaklyHypermeth 0.0680479 1.2430e-06 weaklyHypermeth 1.3812e-04 weaklyHypermeth 0.086944 0.072711 0.0078192 47 0.106462 0.138676 -0.03221482 2.1095e-01 0.0383209 inconclusive 1.0000e+00 1.0000 insignificant 3.1423e-01 0.3950072 insignificant 1.0000e+00 1 insignificant 0.00499222 0.77249569 insignificant 1.00000 insignificant 0.026191 0.072576 -0.0692698 47 0.0377941 0.125294 -0.08749999 1.0000e+00 7.9433e-24 weaklyHypometh 1.0000e+00 2.6478e-21 weaklyHypometh 1.0000e+00 1.7005e-12 weaklyHypometh 1.0000e+00 8.5023e-10 weaklyHypometh -0.0630557 1.0040e-02 weaklyHypometh 0.3346832 insignificant chr14 68471750 68472750 45720 ENSG00000214730 0.750873 192 7 0.6249552 180 7 0.6063080 59 7 0.706418 180 7 0.7674107 66 6 0.7726217 298 7 0.760950 109 7 0.664590 141 7 0.7027462 55 6 0.6737395 56 7 0.717778 229 7 0.588435 38 3 0.6576190 99 7 0.755102 34 3 0.7071429 90 7 0.8214286 23 1 0.7500000 8 0 0.661553 195 7 0.7458855 148 7 0.633807 199 7 0.828705 78 6 0.6909341 73 5 0.790620 94 7 0.789425 78 5 0.6407207 268 7 0.7372162 171 7 0.702742 81 6 0.3791209 54 3 0.7045700 124 7 0.735714 185 7 0.716958 170 7 0.771681 219 7 0.6863241 123 7 0.5903340 135 7 0.754243 193 7 0.6776786 154 5 0.6448980 109 7 0.6976009 202 7 0.6175860 144 7 0.5675634 173 7 0.7392208 178 7 0.5774011 117 7 0.648125 154 7 0.748410 0.6417440 0.595769 0.711977 0.7346664 0.7513532 0.746683 0.668345 0.646734 0.696583 0.680912 0.519960 0.679960 0.7425150 0.6964072 0.8113772 0.7921035 0.659421 0.7523524 0.731149 0.826408 0.6882005 0.771120 0.728597 0.621113 0.710901 0.707222 0.520272 0.699866 0.7218947 0.7353040 0.745122 0.5983022 0.5051828 0.710069 6.4860e-01 0.65061306 0.6137817 0.6410523 0.555415 0.7288078 0.5783788 0.655859 3 0.731331 0.744347 -0.0104960 7 0.734944 0.736091 -0.00114696 7.3370e-01 2.5014e-01 insignificant 1.0000000 1.0000000 insignificant 5.9824e-01 0.4561695 insignificant 1.0000e+00 1.00000 insignificant -0.00389905 0.9156363 insignificant 1 insignificant 0.731331 0.670306 0.0794881 7 0.734944 0.678505 0.0564393 2.5820e-04 7.0067e-01 weaklyHypermeth 5.6610e-03 1.0000e+00 weaklyHypermeth 2.1285e-02 4.4110e-01 weaklyHypermeth 4.1736e-01 1.0000e+00 insignificant 2.8289e-02 3.1105e-01 insignificant 1.0000e+00 insignificant 0.730092 0.660574 7.3811e-02 7 0.697079 0.639143 0.0579356 2.0850e-03 8.2425e-01 weaklyHypermeth 1.3900e-01 1.0000e+00 insignificant 3.6969e-03 9.7174e-01 weaklyHypermeth 2.8438e-01 1.00000000 insignificant 0.0734891 7.5250e-02 insignificant 1.000000 insignificant 0.744347 0.670306 9.3513e-02 7 0.736091 0.6785045 0.0575863 2.6276e-03 8.2422e-01 weaklyHypermeth 4.6922e-02 1.0000e+00 weaklyHypermeth 1.1353e-01 8.3008e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0321876 4.3449e-01 insignificant 1.0000e+00 insignificant 0.743687 0.660574 0.0935742 7 0.716247 0.639143 0.07710355 4.7208e-04 0.9340761 weaklyHypermeth 3.6314e-02 1.0000 weaklyHypermeth 4.7934e-03 0.9365769 weaklyHypermeth 3.9830e-01 1 insignificant 0.07738810 0.11324591 insignificant 1.00000 insignificant 0.666667 0.660574 0.0092311 7 0.6325766 0.639143 -0.00656647 1.8644e-02 2.6663e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 1.0276e-01 5.0862e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0452005 2.7149e-01 insignificant 1.0000000 insignificant chr14 70701550 70702550 45792 PCNX ENSG00000100731 0.866542 282 6 0.8604508 186 6 0.8548002 237 6 0.912408 238 6 0.8654466 117 6 0.8585088 408 6 0.872453 183 6 0.887645 188 6 0.8822221 196 6 0.9062560 172 6 0.909021 257 6 0.693667 124 6 0.9006392 244 6 0.831217 89 3 0.9498712 202 6 0.7516667 90 6 0.9106232 671 5 0.912401 267 6 0.9639610 160 6 0.762833 332 6 0.953472 85 6 0.8441709 104 6 0.860763 210 6 0.923462 192 6 0.9578947 63 5 0.9163010 162 6 0.829586 84 6 0.7893991 151 6 0.9298926 160 6 0.932321 247 6 0.947831 158 6 0.915561 351 6 0.7338324 197 6 0.7705503 110 6 0.950794 315 4 0.5277778 20 0 0.7620995 167 6 0.5457478 255 6 0.9337811 320 6 0.8725932 303 6 0.8168324 334 6 0.7022092 268 6 0.940150 250 6 0.856761 0.8676193 0.864297 0.905769 0.8781091 0.8414452 0.874360 0.889595 0.884339 0.920080 0.902841 0.806750 0.901743 0.8421708 0.9507778 0.6948752 0.9398935 0.894481 0.9336881 0.898829 0.917484 0.8249456 0.828969 0.944899 0.960484 0.888212 0.800716 0.928964 0.920202 0.9170042 0.9355606 0.892355 0.7040591 0.7351824 0.901324 5.4167e-01 0.72102281 0.4194052 0.9155857 0.859253 0.7935055 0.6405593 0.933851 6 0.893603 0.901272 -0.0104330 6 0.762758 0.919274 -0.15651585 9.3027e-01 1.4930e-01 insignificant 1.0000000 1.0000000 insignificant 9.9660e-01 0.0155670 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.03242292 0.1470816 insignificant 1 insignificant 0.894181 0.710526 0.1834811 6 0.889885 0.747801 0.1420839 2.9350e-07 7.5989e-01 weaklyHypermeth 9.1717e-06 1.0000e+00 weaklyHypermeth 7.2997e-04 7.6873e-01 weaklyHypermeth 2.2120e-02 1.0000e+00 weaklyHypermeth 1.5250e-01 6.4457e-02 lowCoverage 1.0000e+00 lowCoverage 0.894181 0.827119 6.5622e-02 6 0.889885 0.851304 0.0385803 2.7228e-02 8.7603e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 1.9133e-01 8.2585e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0145183 7.6678e-01 insignificant 1.000000 insignificant 0.901172 0.710526 1.7870e-01 6 0.905820 0.7478007 0.1580191 1.6986e-05 9.8465e-01 weaklyHypermeth 4.8532e-04 1.0000e+00 weaklyHypermeth 4.7155e-04 9.9859e-01 weaklyHypermeth 1.8862e-02 1.0000e+00 weaklyHypermeth 0.1849209 3.4227e-02 lowCoverage 8.1494e-01 lowCoverage 0.901172 0.827119 0.0583726 6 0.905820 0.851304 0.05451551 1.6246e-02 0.9980475 weaklyHypermeth 5.8022e-01 1.0000 insignificant 5.0336e-02 0.9926599 insignificant 1.0000e+00 1 insignificant 0.04694126 0.36014429 insignificant 1.00000 insignificant 0.710526 0.827119 -0.1206328 6 0.7478007 0.851304 -0.10350358 9.3260e-01 1.0087e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6436e-01 8.7028e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.1379797 1.1313e-01 lowCoverage 1.0000000 lowCoverage chr14 72016450 72017450 45815 ENSG00000200298 0.873066 182 3 0.6346096 209 7 0.8133117 88 6 0.921995 147 4 0.8130878 63 4 0.8737109 314 7 0.857143 90 7 0.739010 135 7 0.7575397 80 6 0.9285714 45 6 0.862677 283 7 0.333333 19 1 0.8486664 72 3 0.946429 34 3 0.8713553 71 7 0.9166667 32 2 0.6666667 132 1 0.798359 110 4 0.8705687 169 6 0.930071 215 4 0.782255 129 7 0.5219048 32 4 0.872734 139 7 0.843359 135 7 0.9047619 21 2 0.8839608 253 7 0.868559 155 7 0.7940084 79 5 0.8582265 134 7 0.772410 199 7 0.841782 203 7 0.901046 338 7 0.3893921 270 7 0.2775701 108 3 0.263810 274 6 0.3333333 8 0 0.4133669 238 7 0.4431792 314 7 0.5466462 214 4 0.8264721 230 4 0.8693182 183 3 0.8472222 54 2 0.544198 155 4 0.861086 0.6712164 0.807556 0.963572 0.8108040 0.8747676 0.807520 0.810096 0.846240 0.957912 0.883816 0.581992 0.859754 0.9646465 0.9017612 0.9831650 0.8658697 0.867661 0.8288496 0.916201 0.887649 0.6654974 0.851317 0.922254 0.966330 0.916595 0.883967 0.801301 0.833581 0.8145782 0.9004911 0.886878 0.2052702 0.2353705 0.123891 1.8064e-01 0.32702670 0.4009526 0.5394193 0.726313 0.7184726 0.7751709 0.442625 1 0.860643 0.862961 -0.0087523 7 0.775337 0.802760 -0.02742247 3.4444e-01 3.6215e-01 insignificant 1.0000000 1.0000000 insignificant 2.4609e-01 0.8233216 insignificant 1.0000e+00 1.00000 insignificant -0.00757543 0.8631554 lowCoverage 1 lowCoverage 0.861279 0.334158 0.4853279 7 0.838481 0.376080 0.4624012 8.3590e-35 1.0000e+00 hypermethylated 2.0898e-32 1.0000e+00 hypermethylated 1.0399e-11 1.0000e+00 hypermethylated 1.4855e-09 1.0000e+00 hypermethylated 4.5940e-01 8.3418e-09 lowCoverage 7.5835e-07 lowCoverage 0.861279 0.760766 1.4373e-01 4 0.838481 0.633072 0.2054092 3.8333e-09 9.6716e-01 lowCoverage 7.6666e-07 1.0000e+00 lowCoverage 5.3364e-04 9.7909e-01 lowCoverage 6.6705e-02 1.00000000 lowCoverage 0.0860707 3.3089e-01 lowCoverage 1.000000 lowCoverage 0.863361 0.334158 5.0409e-01 7 0.846011 0.3760796 0.4699317 3.6855e-29 1.0000e+00 hypermethylated 7.3709e-27 1.0000e+00 hypermethylated 1.4667e-10 1.0000e+00 hypermethylated 2.0953e-08 1.0000e+00 hypermethylated 0.4669754 3.4823e-08 hypermethylated 6.9576e-06 hypermethylated 0.863361 0.760766 0.1649806 4 0.846011 0.633072 0.21293960 5.0298e-08 0.9492955 lowCoverage 8.7456e-06 1.0000 lowCoverage 3.0734e-03 0.9025299 lowCoverage 3.4149e-01 1 lowCoverage 0.09364609 0.29209814 lowCoverage 1.00000 lowCoverage 0.334158 0.760766 -0.3145821 4 0.3760796 0.633072 -0.25699205 1.0000e+00 5.3004e-06 lowCoverage 1.0000e+00 2.7897e-04 lowCoverage 1.0000e+00 3.4089e-05 lowCoverage 1.0000e+00 3.7876e-03 lowCoverage -0.3733293 4.7885e-03 lowCoverage 0.2121084 lowCoverage chr14 72277950 72278950 45816 ENSG00000200298 0.699142 136 7 0.4620331 168 7 0.7758437 137 7 0.736472 73 5 0.6173650 67 5 0.9050663 161 6 0.607267 143 8 0.698640 145 7 0.6236668 97 7 0.6138748 83 4 0.867915 246 7 0.609471 98 6 0.5553314 149 8 0.671429 22 2 0.4830214 100 5 0.3500000 31 3 0.6107340 52 4 0.563203 66 5 0.9167018 138 7 0.717932 107 4 0.934791 52 4 0.7500000 17 0 0.687415 139 9 0.534989 52 4 0.9241228 63 3 0.6610317 173 7 0.756591 55 4 0.7074074 46 4 0.8810305 146 7 0.811604 221 7 0.774510 169 7 0.791655 132 5 0.1611536 222 7 0.1915841 154 7 0.437909 146 7 0.5319917 58 3 0.3357004 94 7 0.4557076 247 8 0.7144467 153 6 0.6130496 161 7 0.5583479 47 2 0.4833333 36 4 0.648669 77 3 0.864428 0.6277021 0.733942 0.715134 0.7977227 0.8318139 0.855365 0.760966 0.806758 0.965005 0.849728 0.725723 0.628937 0.8117926 0.7604103 0.5593989 0.6883312 0.587852 0.9014835 0.818249 0.919902 0.5935659 0.844587 0.833385 0.861268 0.843281 0.835501 0.810404 0.849304 0.8799103 0.7571747 0.883621 0.2105440 0.1980474 0.513448 6.2358e-01 0.43943666 0.5241798 0.7001594 0.625887 0.5032184 0.3965909 0.637790 1 0.754172 0.830830 -0.0766860 7 0.522166 0.663339 -0.14117318 9.9766e-01 3.9232e-04 weaklyHypometh 1.0000000 0.0980793 weaklyHypometh 9.9955e-01 0.0016405 weaklyHypometh 1.0000e+00 0.82027 insignificant -0.11367360 0.0202386 weaklyHypometh 1 insignificant 0.754172 0.353963 0.4029170 7 0.522166 0.276268 0.2458981 4.1432e-24 9.9992e-01 hypermethylated 4.1432e-22 1.0000e+00 hypermethylated 5.1142e-08 9.9999e-01 hypermethylated 4.6492e-06 1.0000e+00 hypermethylated 3.0191e-01 2.4412e-03 weaklyHypermeth 9.7649e-02 weaklyHypermeth 0.767356 0.582278 1.9865e-01 6 0.628232 0.602761 0.0254711 4.0668e-07 3.9089e-01 weaklyHypermeth 5.8097e-05 1.0000e+00 weaklyHypermeth 3.8584e-04 8.1475e-01 weaklyHypermeth 6.4307e-02 1.00000000 weaklyHypermeth 0.0506861 3.4173e-01 lowCoverage 1.000000 lowCoverage 0.830830 0.353963 4.8585e-01 7 0.663339 0.2762679 0.3870713 4.5580e-25 1.0000e+00 hypermethylated 5.0644e-23 1.0000e+00 hypermethylated 7.2959e-09 1.0000e+00 hypermethylated 9.1198e-07 1.0000e+00 hypermethylated 0.4155880 3.3515e-04 hypermethylated 1.5959e-02 hypermethylated 0.841219 0.582278 0.2455558 6 0.837314 0.602761 0.23455339 2.6950e-08 0.9964444 hypermethylated 6.7375e-06 1.0000 hypermethylated 5.9632e-05 0.9917669 hypermethylated 1.1926e-02 1 hypermethylated 0.16435966 0.00964974 lowCoverage 0.96497 lowCoverage 0.356751 0.582278 -0.2083324 6 0.3128017 0.602761 -0.28995914 1.0000e+00 5.1060e-06 hypomethylated 1.0000e+00 2.7897e-04 hypomethylated 9.9992e-01 7.8281e-03 weaklyHypometh 1.0000e+00 2.1157e-01 insignificant -0.2512283 8.3800e-03 lowCoverage 0.3029172 lowCoverage chr14 72470750 72471750 45822 ENSG00000176043 0.728424 115 5 0.7687822 137 5 0.6656746 39 5 0.707251 79 4 0.6433862 71 5 0.7315442 146 5 0.596320 54 5 0.731506 111 5 0.6489130 51 2 0.6739394 43 4 0.790763 128 5 0.800000 15 1 0.7565657 55 5 0.645714 53 5 0.6058489 67 5 0.7750000 28 4 0.7500000 4 0 0.786553 53 5 0.6900000 65 5 0.814594 114 5 0.483333 12 0 0.8142857 22 4 0.570455 39 5 0.543514 46 2 0.7797619 32 4 0.7662855 125 5 0.627778 48 4 0.6805556 17 1 0.8413109 70 5 0.875714 122 5 0.758100 117 5 0.678049 117 5 0.6976190 102 5 0.7506044 62 5 0.677895 95 5 0.8250000 21 3 0.6380276 79 5 0.7080769 89 5 0.6512815 86 4 0.7164160 92 5 0.7190909 77 4 0.6232323 41 4 0.728535 56 4 0.763975 0.7654430 0.593112 0.802144 0.8154195 0.7740897 0.622964 0.758427 0.718297 0.705339 0.795663 0.821429 0.821068 0.7018707 0.8007986 0.8244048 0.7736416 0.793263 0.7559524 0.844771 0.505952 0.7993597 0.590097 0.668074 0.761151 0.776656 0.801190 0.886905 0.891557 0.9091270 0.8312035 0.729094 0.7047052 0.8130756 0.737510 8.2816e-01 0.81693737 0.7565018 0.7354337 0.709634 0.6908009 0.7417027 0.749278 1 0.754902 0.779373 -0.0125266 5 0.635559 0.532437 0.10312263 5.7121e-01 6.4507e-01 insignificant 1.0000000 1.0000000 insignificant 5.4555e-01 0.6395656 insignificant 1.0000e+00 1.00000 insignificant 0.01394374 0.7260467 lowCoverage 1 lowCoverage 0.755431 0.754464 0.0062470 5 0.741486 0.603443 0.1380427 2.6905e-01 7.8415e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.8071e-01 7.6552e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -6.6480e-04 9.8302e-01 lowCoverage 1.0000e+00 lowCoverage 0.755431 0.707386 5.1923e-02 4 0.741486 0.731735 0.0097505 3.9303e-02 7.2422e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 2.4877e-01 8.9533e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 0.0278278 3.1112e-01 lowCoverage 1.000000 lowCoverage 0.781414 0.754464 2.4055e-02 5 0.621176 0.6034431 0.0177330 5.6497e-01 9.5334e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.0448e-01 9.5172e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0146085 7.4853e-01 lowCoverage 1.0000e+00 lowCoverage 0.781414 0.707386 0.0555912 4 0.621176 0.731735 -0.11055920 1.5506e-01 0.8455260 lowCoverage 1.0000e+00 1.0000 lowCoverage 2.6699e-01 0.6512310 lowCoverage 1.0000e+00 1 lowCoverage 0.01388402 0.74479555 lowCoverage 1.00000 lowCoverage 0.754464 0.707386 0.0505322 4 0.6034431 0.731735 -0.12829218 5.3200e-02 7.7367e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 1.5015e-01 8.1288e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0284926 4.2249e-01 lowCoverage 1.0000000 lowCoverage chr14 74103550 74104550 45849 ISCA2 ENSG00000165898 0.850961 255 6 0.6127995 143 6 0.6810144 236 6 0.915444 238 6 0.7240085 119 6 0.8698275 373 6 0.853141 133 7 0.752660 186 6 0.8162170 193 6 0.9166828 224 5 0.861185 195 6 0.755003 154 5 0.7692682 218 6 0.900750 147 6 0.8781813 270 6 0.7253679 130 6 0.6872054 39 5 0.892412 326 6 0.8806452 150 6 0.808465 327 6 0.779167 92 6 0.8171766 117 5 0.829772 215 6 0.745546 146 6 0.9062771 66 5 0.8895622 206 6 0.723836 147 6 0.8604546 74 5 0.7993070 158 6 0.896302 221 7 0.909993 204 7 0.873021 288 7 0.7230099 108 6 0.6268246 163 6 0.699166 175 5 0.4543651 41 6 0.6105952 185 6 0.7736066 181 6 0.8302925 259 6 0.8314063 224 6 0.8519196 197 6 0.8760116 239 6 0.855812 208 6 0.857794 0.7242315 0.816575 0.911220 0.8389639 0.8901078 0.863713 0.796039 0.770544 0.900138 0.837281 0.883845 0.891125 0.8756465 0.8922530 0.6932239 0.7782359 0.867737 0.8837648 0.917613 0.916152 0.8057841 0.863957 0.762296 0.876575 0.944555 0.743787 0.800766 0.931310 0.9421549 0.9323176 0.882780 0.7664653 0.7744348 0.824086 4.8257e-01 0.71713885 0.9340279 0.7932699 0.857013 0.8479517 0.8802029 0.783894 5 0.852318 0.872285 -0.0194654 6 0.802291 0.820237 -0.01794579 9.1382e-01 1.4670e-01 insignificant 1.0000000 1.0000000 insignificant 9.6680e-01 0.0252203 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.02830597 0.3043494 insignificant 1 insignificant 0.852318 0.752638 0.1034249 6 0.802291 0.622822 0.1794690 2.8538e-07 2.1498e-01 weaklyHypermeth 9.1717e-06 1.0000e+00 weaklyHypermeth 1.5803e-02 1.7047e-01 weaklyHypermeth 3.2251e-01 1.0000e+00 insignificant 1.5963e-01 1.5373e-02 weaklyHypermeth 4.3924e-01 insignificant 0.852318 0.833185 2.3347e-02 6 0.802291 0.856066 -0.0537752 3.9520e-01 7.4473e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.1626e-01 5.8198e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0415266 6.7116e-02 insignificant 1.000000 insignificant 0.872285 0.752638 1.2533e-01 6 0.820237 0.6228219 0.1974148 1.4753e-05 8.2925e-01 weaklyHypermeth 4.3390e-04 1.0000e+00 weaklyHypermeth 2.2190e-03 4.3279e-01 weaklyHypermeth 6.3401e-02 1.0000e+00 weaklyHypermeth 0.1879399 7.4193e-03 weaklyHypermeth 2.5584e-01 insignificant 0.872285 0.833185 0.0408889 6 0.820237 0.856066 -0.03582943 1.6035e-01 0.8507857 insignificant 1.0000e+00 1.0000 insignificant 7.5852e-02 0.9356423 insignificant 1.0000e+00 1 insignificant -0.01322061 0.52421359 insignificant 1.00000 insignificant 0.752638 0.833185 -0.0829836 6 0.6228219 0.856066 -0.23324419 4.6104e-02 1.6383e-02 weaklyHypometh 1.0000e+00 2.8743e-01 insignificant 4.9157e-01 5.2114e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.2011605 6.6210e-03 weaklyHypometh 0.2546521 insignificant chr14 74476750 74477750 45864 RPS6KL1 ENSG00000198208 0.727430 318 8 0.6033109 211 9 0.5709636 145 5 0.721462 268 6 0.5388278 95 7 0.7337848 370 6 0.722059 133 9 0.633799 160 9 0.6089976 184 11 0.7203463 184 7 0.651602 293 9 0.479545 49 4 0.7746817 227 9 0.643223 141 9 0.6904475 173 9 0.6177249 43 4 0.6879986 137 7 0.744457 505 10 0.7871517 239 5 0.625659 266 9 0.798052 51 5 0.8150306 126 6 0.606869 152 9 0.763645 68 6 0.7920996 232 6 0.6308322 223 6 0.752086 151 6 0.6681652 43 4 0.8048387 297 10 0.747748 263 6 0.703591 254 6 0.799178 333 8 0.4737685 199 9 0.5793897 202 8 0.837500 240 8 0.7216667 62 3 0.4595238 130 7 0.8079726 278 6 0.6952852 172 8 0.7820431 281 9 0.7644904 272 9 0.7141248 176 9 0.784195 217 9 0.855778 0.8188625 0.779594 0.893642 0.7194548 0.8697889 0.827066 0.842025 0.803984 0.878753 0.873779 0.774686 0.905265 0.8457148 0.8246479 0.5860465 0.7982312 0.867351 0.8860483 0.782897 0.869822 0.8635081 0.791922 0.858017 0.899074 0.847916 0.802594 0.715012 0.911023 0.8822815 0.8856870 0.879122 0.6953029 0.8684408 0.925581 7.3767e-01 0.80658915 0.9164099 0.8626495 0.871186 0.8552877 0.8126788 0.886388 4 0.847138 0.878650 -0.0045141 6 0.654465 0.670648 -0.01618307 9.2980e-01 4.7254e-01 insignificant 1.0000000 1.0000000 insignificant 9.6641e-01 0.3561263 insignificant 1.0000e+00 1.00000 insignificant -0.07600436 0.0103000 weaklyHypometh 1 insignificant 0.847138 0.842484 0.0150589 7 0.654465 0.567636 0.0868284 1.9546e-02 8.4718e-01 weaklyHypermeth 3.1025e-01 1.0000e+00 insignificant 5.2823e-01 6.8224e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.7537e-02 8.1111e-01 insignificant 1.0000e+00 insignificant 0.852106 0.855098 8.0825e-03 9 0.705737 0.712559 -0.0068227 1.4727e-01 4.3578e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.1325e-01 1.7850e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0838541 6.1343e-03 weaklyHypometh 0.598942 insignificant 0.878650 0.842484 1.5102e-02 6 0.670648 0.5676363 0.1030115 5.8240e-02 9.3188e-01 insignificant 7.6632e-01 1.0000e+00 insignificant 4.0908e-01 8.5972e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0935411 2.3486e-01 insignificant 1.0000e+00 insignificant 0.879192 0.855098 0.0172056 6 0.715747 0.712559 0.00318819 1.5187e-01 0.3513293 insignificant 1.0000e+00 1.0000 insignificant 2.9303e-01 0.6215730 insignificant 1.0000e+00 1 insignificant -0.00784977 0.78031452 insignificant 1.00000 insignificant 0.852055 0.855098 0.0027251 7 0.6862589 0.712559 -0.02630042 6.2686e-01 2.8006e-02 inconclusive 1.0000e+00 4.6080e-01 insignificant 7.0508e-01 2.9805e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.1013909 2.0070e-01 insignificant 1.0000000 insignificant chr14 75673450 75674450 45899 C14orf179 ENSG00000119650 0.280069 267 8 0.1292946 245 5 0.2815873 99 5 0.213349 207 7 0.1923370 75 5 0.3808830 465 8 0.159104 103 5 0.153589 121 5 0.2858936 127 5 0.1285714 50 5 0.249195 200 5 0.076190 47 3 0.1771429 57 5 0.266667 48 5 0.1124074 63 5 0.2766667 55 5 NA 0 0 0.474298 262 7 0.3480968 205 6 0.286685 396 8 0.297857 72 3 0.1744444 43 3 0.380958 168 8 0.363077 63 5 0.3974852 270 2 0.4072215 366 8 0.126656 138 5 0.3241758 35 3 0.3362745 86 5 0.321712 382 8 0.247824 337 8 0.424976 331 8 0.1810652 144 5 0.2145889 59 2 0.378617 315 8 0.1428571 84 2 0.2095243 164 5 0.3204773 329 8 0.3029247 298 6 0.3856824 264 6 0.3387953 208 7 0.4268855 274 7 0.399839 134 8 0.156683 0.1025354 0.286158 0.044751 0.1030554 0.1565421 0.081643 0.101204 0.086048 0.041241 0.197322 0.062996 0.097171 0.1350529 0.0773534 0.1532738 NA 0.100619 0.1958145 0.087589 0.149702 0.0825728 0.145263 0.210440 0.180914 0.206544 0.120668 0.197279 0.145571 0.0919736 0.0648100 0.199225 0.1633577 0.0944565 0.202698 7.3280e-02 0.26185524 0.0401514 0.0934199 0.140005 0.0903423 0.1080995 0.117725 2 0.256311 0.296814 -0.0213482 8 0.354759 0.403926 -0.04916698 9.5501e-01 1.7883e-01 insignificant 1.0000000 1.0000000 insignificant 9.5167e-01 0.0621805 insignificant 1.0000e+00 1.00000 insignificant -0.08151858 0.0300549 weaklyHypometh 1 insignificant 0.256153 0.284932 -0.0219187 8 0.336603 0.358058 -0.0214543 3.5191e-01 1.8869e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.9664e-01 8.8617e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -5.8185e-03 8.9603e-01 insignificant 1.0000e+00 insignificant 0.256153 0.377759 -8.9796e-05 8 0.336603 0.357813 -0.0212093 7.1232e-01 1.3458e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.2410e-01 8.1201e-02 insignificant 1.0000e+00 1.00000000 insignificant -0.1354555 8.7750e-04 weaklyHypometh 0.146250 insignificant 0.296021 0.284932 5.1141e-05 8 0.360666 0.3580576 0.0026086 1.8426e-01 5.9911e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.3773e-01 9.8504e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0757001 1.2471e-01 insignificant 1.0000e+00 insignificant 0.296021 0.377759 0.0149325 8 0.360666 0.357813 0.00285351 2.7339e-01 0.3451675 insignificant 1.0000e+00 1.0000 insignificant 4.6928e-01 0.4258133 insignificant 1.0000e+00 1 insignificant -0.05393697 0.14376457 insignificant 1.00000 insignificant 0.284932 0.377759 0.0269658 8 0.3580576 0.357813 0.00024492 3.9366e-01 1.1591e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6563e-01 6.0319e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.1296371 1.6320e-02 weaklyHypometh 0.4279219 insignificant chr14 76454750 76455750 45911 ENSG00000210304 0.422115 83 3 0.3872429 213 8 0.3399898 194 8 0.410539 152 6 0.4724359 115 7 0.6289815 189 8 0.474146 164 7 0.339677 178 7 0.3497672 158 5 0.6497790 124 4 0.496949 177 7 0.247720 65 1 0.3815292 115 2 0.098990 83 4 0.4048951 181 4 0.3087719 64 1 0.8662651 88 1 0.405267 114 3 0.4414125 134 3 0.533184 164 8 0.226984 48 5 0.2029486 81 5 0.540123 99 8 0.589422 130 6 0.6456986 161 5 0.5268562 243 8 0.339612 173 5 0.3025063 93 6 0.5915584 105 3 0.348499 276 7 0.337613 197 8 0.549551 164 8 0.0409754 206 7 0.0000000 73 3 0.119883 101 5 0.0000000 65 3 0.0830848 191 8 0.0561780 225 8 0.4556489 141 5 0.3568394 140 5 0.5616452 121 4 0.2010870 64 1 0.378252 118 5 0.475848 0.4097726 0.250355 0.412053 0.2596577 0.5770984 0.340562 0.402524 0.341744 0.451931 0.445572 0.242573 0.203673 0.3568790 0.3648568 0.2352379 0.8085779 0.364220 0.3576710 0.404235 0.502898 0.1203615 0.511399 0.322667 0.496629 0.464183 0.319055 0.207258 0.428887 0.3245010 0.4057754 0.467772 0.0087901 0.0000000 0.025918 0.0000e+00 0.03655947 0.0164169 0.2276323 0.087506 0.2479311 0.1497129 0.275131 1 0.399637 0.396718 0.0013418 7 0.448436 0.436261 0.01217500 3.3485e-01 3.8205e-01 insignificant 1.0000000 1.0000000 insignificant 4.7400e-01 0.2335718 insignificant 1.0000e+00 1.00000 insignificant -0.00046486 0.9935984 lowCoverage 1 lowCoverage 0.399637 0.038328 0.3687404 7 0.448436 0.075123 0.3733126 5.5485e-24 1.0000e+00 hypermethylated 5.0441e-22 1.0000e+00 hypermethylated 1.5238e-13 1.0000e+00 hypermethylated 3.0477e-11 1.0000e+00 hypermethylated 3.8296e-01 1.4824e-09 lowCoverage 1.4824e-07 lowCoverage 0.399637 0.318417 1.3787e-01 4 0.448436 0.370152 0.0782835 5.4280e-03 8.0176e-01 lowCoverage 3.0155e-01 1.0000e+00 lowCoverage 1.3557e-02 8.2495e-01 lowCoverage 6.7783e-01 1.00000000 lowCoverage 0.0422885 5.6062e-01 lowCoverage 1.000000 lowCoverage 0.396718 0.038328 3.5867e-01 7 0.436261 0.0751232 0.3611376 6.1750e-24 1.0000e+00 hypermethylated 6.1750e-22 1.0000e+00 hypermethylated 1.5818e-12 1.0000e+00 hypermethylated 3.9545e-10 1.0000e+00 hypermethylated 0.3834276 1.4552e-06 hypermethylated 1.4552e-04 hypermethylated 0.397175 0.320205 0.1487622 4 0.493862 0.444281 0.04958136 3.9194e-02 0.9909838 lowCoverage 1.0000e+00 1.0000 lowCoverage 1.0707e-01 0.9987868 lowCoverage 1.0000e+00 1 lowCoverage 0.04275334 0.58039957 lowCoverage 1.00000 lowCoverage 0.038328 0.318417 -0.2652950 4 0.0751232 0.370152 -0.29502908 1.0000e+00 1.3776e-14 lowCoverage 1.0000e+00 2.2959e-12 lowCoverage 1.0000e+00 1.1098e-06 lowCoverage 1.0000e+00 1.5854e-04 lowCoverage -0.3406742 3.1213e-03 lowCoverage 0.1944296 lowCoverage chr14 76483450 76484450 45913 ENSG00000210304 0.283479 356 8 0.1776990 219 8 0.1628733 354 9 0.200135 228 8 0.2255705 190 8 0.2346299 435 9 0.203680 335 8 0.164477 268 9 0.1424431 324 8 0.1734330 197 8 0.181279 288 9 0.180170 361 8 0.1820315 366 8 0.835833 49 2 0.1587529 367 8 0.1555556 273 8 0.1652237 241 6 0.187493 226 8 0.2253543 205 8 0.197739 368 9 0.123699 100 7 0.3220186 79 7 0.196651 303 9 0.222222 127 7 0.2477679 73 7 0.2045073 367 8 0.264128 160 9 0.2790625 109 8 0.2742020 227 8 0.175205 457 8 0.175917 327 9 0.175656 435 9 0.1962244 188 8 0.1910331 149 8 0.166667 47 5 0.3333333 110 6 0.2138917 159 8 0.2693930 225 8 0.2987561 274 8 0.1949418 312 8 0.2078125 100 8 0.2017757 395 8 0.169266 200 8 0.259491 0.2708654 0.205101 0.270644 0.2845806 0.3059658 0.268978 0.241000 0.215540 0.264579 0.269262 0.185056 0.268133 0.2906140 0.2376123 0.2370740 0.2463970 0.236914 0.2964709 0.279534 0.187239 0.2946322 0.272677 0.339152 0.326995 0.254678 0.292055 0.308399 0.248492 0.2644993 0.2490987 0.264284 0.2988468 0.2895831 0.306510 3.3915e-01 0.31638609 0.3262908 0.2836694 0.295758 0.2778678 0.3064429 0.256508 7 0.214690 0.269175 -0.0084571 8 0.189920 0.210271 -0.02035080 3.2274e-01 5.1631e-01 insignificant 1.0000000 1.0000000 insignificant 3.6729e-01 0.3720692 insignificant 1.0000e+00 1.00000 insignificant 0.00013955 0.9970171 insignificant 1 insignificant 0.214690 0.272210 -0.0421564 8 0.189920 0.228298 -0.0383784 4.4522e-01 1.4772e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 4.0328e-01 1.6750e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -6.5311e-03 8.7698e-01 insignificant 1.0000e+00 insignificant 0.214690 0.211553 -1.7400e-02 8 0.189920 0.210443 -0.0205227 4.3780e-01 2.3713e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.0774e-01 2.6499e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0073822 8.5473e-01 insignificant 1.000000 insignificant 0.269175 0.272210 -3.4924e-02 8 0.210271 0.2282984 -0.0180276 9.2125e-01 1.8628e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.0233e-01 5.3723e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0066707 8.2947e-01 insignificant 1.0000e+00 insignificant 0.269175 0.211553 -0.0152613 8 0.210271 0.210443 -0.00017188 8.0177e-01 0.4429964 insignificant 1.0000e+00 1.0000 insignificant 7.7644e-01 0.5976573 insignificant 1.0000e+00 1 insignificant 0.00724265 0.79833161 insignificant 1.00000 insignificant 0.272210 0.211553 0.0202601 8 0.2282984 0.210443 0.01785574 5.0447e-01 9.7587e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.2137e-01 9.5658e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0139133 6.8798e-01 insignificant 1.0000000 insignificant chr14 76491950 76492950 45914 ENSG00000210304 0.015509 1147 38 0.0079214 1062 36 0.0060301 1345 36 0.015508 826 29 0.0050899 631 30 0.0440272 1463 38 0.015749 1248 30 0.011971 1010 30 0.0112500 1282 30 0.0070572 1267 30 0.015018 1180 30 0.008152 1173 30 0.0079516 1244 30 0.000000 365 13 0.0066115 1402 30 0.0040488 1087 29 0.0020896 836 24 0.039080 916 25 0.0068674 657 32 0.018005 1251 32 0.042393 551 29 0.0013955 810 26 0.031960 1124 36 0.017901 544 29 0.0091368 469 26 0.0190131 1521 38 0.015579 841 30 0.0190174 555 28 0.0099122 934 30 0.011767 1606 38 0.010888 1540 38 0.016593 1425 32 0.0077623 968 36 0.0070131 660 29 0.014454 592 21 0.0000000 391 29 0.0424024 462 29 0.0030301 1026 32 0.0069031 1194 32 0.0236030 1247 38 0.0100994 763 28 0.0096648 1129 30 0.018010 957 32 0.011288 0.0093265 0.011000 0.012530 0.0055401 0.0370676 0.026796 0.017809 0.012904 0.010153 0.024022 0.015111 0.011792 0.0022422 0.0053273 0.0066645 0.0051622 0.011759 0.0084163 0.019837 0.012029 0.0033072 0.043436 0.017345 0.011895 0.012113 0.028101 0.027104 0.014589 0.0070993 0.0052675 0.024993 0.0101761 0.0085271 0.022280 0.0000e+00 0.04875794 0.0044045 0.0063442 0.011540 0.0018109 0.0061996 0.016822 26 0.015380 0.017367 -0.0031234 32 0.029107 0.028867 0.00024032 9.8653e-01 3.5585e-01 insignificant 1.0000000 1.0000000 insignificant 9.9468e-01 0.7146982 insignificant 1.0000e+00 1.00000 insignificant -0.00473294 0.2491282 insignificant 1 insignificant 0.015381 0.010493 0.0069533 32 0.030562 0.009079 0.0214832 3.4022e-01 6.9119e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.2296e-01 9.3788e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -4.6739e-05 9.9471e-01 insignificant 1.0000e+00 insignificant 0.015339 0.016635 5.0017e-03 29 0.019013 0.014293 0.0047195 6.7880e-01 6.8718e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 8.0418e-01 3.9851e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0012592 7.5799e-01 insignificant 1.000000 insignificant 0.017286 0.010490 6.8480e-03 32 0.017376 0.0088576 0.0085179 2.6477e-01 9.3836e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.5885e-01 9.9617e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0046862 5.2608e-01 insignificant 1.0000e+00 insignificant 0.017292 0.016635 0.0065721 29 0.018747 0.014293 0.00445393 6.4266e-01 0.8967613 insignificant 1.0000e+00 1.0000 insignificant 7.8219e-01 0.9201746 insignificant 1.0000e+00 1 insignificant 0.00347373 0.44635664 insignificant 1.00000 insignificant 0.010498 0.016635 -0.0036097 29 0.0095569 0.014293 -0.00473645 9.0765e-01 1.3621e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9340e-01 5.3603e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0012125 8.6791e-01 insignificant 1.0000000 insignificant chr14 76492350 76493350 45915 ENSG00000210304 0.031200 1060 36 0.0250484 1074 37 0.0106469 1362 37 0.032135 729 28 0.0281702 644 31 0.0435393 1438 38 0.026965 1270 32 0.029973 1022 32 0.0261719 1293 31 0.0213479 1276 31 0.046986 1192 31 0.007889 1182 31 0.0230796 1255 31 0.000000 370 14 0.0117746 1408 31 0.0199166 1092 29 0.0020200 840 24 0.056312 771 23 0.0047654 630 30 0.037487 1266 32 0.057547 559 30 0.0357820 821 27 0.058276 1118 36 0.026374 563 31 0.0340537 477 26 0.0087953 1501 37 0.023980 852 31 0.0390971 569 30 0.0393141 948 32 0.028873 1585 37 0.027855 1521 37 0.028989 1429 31 0.0205117 987 37 0.0226897 665 29 0.044757 552 20 0.0000000 313 27 0.0516617 491 31 0.0030301 979 31 0.0210554 1122 30 0.0395949 1200 36 0.0005071 682 26 0.0071682 1034 28 0.012966 875 31 0.011253 0.0092973 0.011554 0.012490 0.0064632 0.0373433 0.027159 0.017753 0.012864 0.010121 0.024260 0.015064 0.011755 0.0022352 0.0058330 0.0066436 0.0051460 0.011722 0.0083899 0.019949 0.011991 0.0032968 0.043299 0.017290 0.011858 0.012240 0.028012 0.027019 0.015066 0.0070770 0.0052509 0.025019 0.0101442 0.0085526 0.022210 5.2247e-05 0.04881409 0.0043906 0.0063243 0.011504 0.0018052 0.0061802 0.016769 26 0.013649 0.017752 -0.0028323 31 0.036461 0.033674 0.00278704 9.6395e-01 4.4267e-01 insignificant 1.0000000 1.0000000 insignificant 9.9719e-01 0.7159556 insignificant 1.0000e+00 1.00000 insignificant -0.00980666 0.0720260 insignificant 1 insignificant 0.013650 0.013547 0.0018184 31 0.038239 0.020893 0.0173466 6.2279e-01 7.3601e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.7201e-01 9.4249e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.9636e-04 9.5881e-01 insignificant 1.0000e+00 insignificant 0.013613 0.010381 2.7241e-03 27 0.028100 0.030637 -0.0025367 7.4054e-01 4.8758e-02 inconclusive 1.0000e+00 1.0000e+00 insignificant 8.1208e-01 3.1653e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0080130 3.2792e-01 insignificant 1.000000 insignificant 0.017672 0.013544 4.0203e-03 31 0.022571 0.0203951 0.0021754 7.4375e-01 9.3856e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.8802e-01 9.9580e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0103030 3.1237e-01 insignificant 1.0000e+00 insignificant 0.017691 0.010381 0.0054162 27 0.024946 0.030637 -0.00569051 7.1204e-01 0.8410268 insignificant 1.0000e+00 1.0000 insignificant 7.3849e-01 0.9478969 insignificant 1.0000e+00 1 insignificant 0.01781967 0.05712412 insignificant 1.00000 insignificant 0.013564 0.010381 0.0014408 27 0.0225419 0.030637 -0.00809492 8.3334e-01 4.9860e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8246e-01 8.5063e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0075166 5.0955e-01 insignificant 1.0000000 insignificant chr14 76512650 76513650 45917 ENSG00000214657 0.731906 137 6 0.6878181 248 6 0.7512837 251 6 0.606624 92 5 0.7497886 175 6 0.7199380 282 6 0.768770 294 6 0.723580 167 6 0.7892294 170 6 0.8501653 192 6 0.695193 373 6 0.795979 213 6 0.7442452 242 6 NA 0 0 0.7549253 242 6 0.7931217 189 6 0.7582749 235 6 0.818182 52 2 0.7663330 204 6 0.652548 357 6 0.687232 87 6 0.4224359 54 4 0.768412 151 6 0.827488 117 6 0.4647059 43 4 0.7652880 226 6 0.538907 103 6 0.7417154 123 5 0.7553140 118 6 0.720556 175 6 0.742525 218 6 0.692169 330 6 0.5964735 223 6 0.6142115 184 6 0.552717 321 6 0.8055556 16 2 0.7279739 151 6 0.7169177 173 6 0.6767196 102 6 0.8220822 113 6 0.7735690 58 5 0.8505574 62 4 0.725309 55 2 0.728850 0.7134121 0.721757 0.681252 0.7471823 0.7152136 0.765270 0.729484 0.799785 0.850234 0.681959 0.815476 0.759698 NA 0.7477408 0.7968099 0.7329855 0.785588 0.7369969 0.673390 0.651151 0.6268293 0.782756 0.845408 0.553128 0.793974 0.570378 0.770475 0.765385 0.7301071 0.7552127 0.679479 0.6030072 0.6744066 0.622410 8.3659e-01 0.72938068 0.7268775 0.6822803 0.856731 0.7470806 0.7952182 0.696206 4 0.725881 0.683668 0.0384102 6 0.743559 0.716477 0.02708219 1.1004e-01 6.3351e-01 insignificant 1.0000000 1.0000000 insignificant 2.8066e-02 0.7194398 weaklyHypermeth 1.0000e+00 1.00000 insignificant 0.06792386 0.1090872 insignificant 1 insignificant 0.725881 0.631086 0.0940942 6 0.743559 0.637609 0.1059498 3.6271e-08 9.9750e-01 weaklyHypermeth 1.2507e-06 1.0000e+00 weaklyHypermeth 1.0428e-02 9.6373e-01 weaklyHypermeth 2.3496e-01 1.0000e+00 insignificant 7.6178e-02 1.1401e-01 insignificant 1.0000e+00 insignificant 0.725881 0.753846 -1.8351e-02 6 0.743559 0.756111 -0.0125521 4.2472e-01 3.3862e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.8478e-01 1.6779e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0244944 5.0314e-01 lowCoverage 1.000000 lowCoverage 0.683668 0.631086 6.0831e-02 6 0.716477 0.6376094 0.0788676 6.2755e-05 8.1612e-01 weaklyHypermeth 1.5718e-03 1.0000e+00 weaklyHypermeth 8.0476e-02 3.5624e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0082542 8.8127e-01 insignificant 1.0000e+00 insignificant 0.683668 0.753846 -0.0249922 6 0.716477 0.756111 -0.03963432 7.5790e-01 0.2203194 insignificant 1.0000e+00 1.0000 insignificant 8.4950e-01 0.1026202 insignificant 1.0000e+00 1 insignificant -0.09241830 0.08064129 lowCoverage 1.00000 lowCoverage 0.631086 0.753846 -0.0987424 6 0.6376094 0.756111 -0.11850192 9.8145e-01 3.7221e-03 weaklyHypometh 1.0000e+00 8.2713e-02 weaklyHypometh 9.8744e-01 3.6730e-02 weaklyHypometh 1.0000e+00 7.3035e-01 insignificant -0.1006725 7.6998e-02 lowCoverage 1.0000000 lowCoverage chr14 76576150 76577150 45920 C14orf4 ENSG00000119669 0.035631 333 4 0.0372737 382 8 0.0209222 247 8 0.029219 284 4 0.0512395 213 12 0.0970934 479 5 0.073009 348 8 0.032660 335 8 0.0781922 259 7 0.1421905 156 4 0.065941 399 8 0.024691 95 5 0.0336927 194 5 0.064082 108 3 0.0153756 248 4 0.0898065 180 7 0.2000000 179 4 0.065801 359 4 0.0123549 304 4 0.012728 452 5 0.131702 144 8 0.0185185 97 4 0.164007 231 4 0.040323 168 7 0.0040816 79 4 0.0449432 393 8 0.066593 294 8 0.0078042 86 3 0.0416408 351 4 0.012112 436 8 0.038494 443 8 0.128593 435 5 0.0156250 198 8 0.1288462 249 5 0.000000 290 7 0.0000000 19 2 0.0953631 210 8 0.0000000 440 8 0.1356375 468 7 0.0064153 405 7 0.2139187 308 4 0.0187704 423 4 0.158782 308 4 0.084074 0.0734472 0.054743 0.069267 0.0520460 0.1862725 0.112125 0.048354 0.032302 0.078285 0.090274 0.062225 0.064082 0.1170949 0.0609840 0.1175802 0.2162230 0.118078 0.0317325 0.036655 0.032745 0.0000000 0.092840 0.095816 0.011810 0.034842 0.041404 0.025710 0.056589 0.0203445 0.0276193 0.095824 0.0000000 0.0054075 0.000000 2.1919e-03 0.01807821 0.0000000 0.0239663 0.016906 0.0629951 0.0271150 0.044740 4 0.084624 0.050681 0.0362611 8 0.037912 0.111063 -0.07315124 4.4976e-01 9.9985e-01 insignificant 1.0000000 1.0000000 insignificant 3.7815e-01 0.9787730 insignificant 1.0000e+00 1.00000 insignificant 0.00086068 0.9638802 insignificant 1 insignificant 0.085068 0.005694 0.0875976 7 0.060660 0.036977 0.0236822 7.7609e-06 9.9972e-01 weaklyHypermeth 1.9900e-04 1.0000e+00 weaklyHypermeth 2.4579e-05 9.9564e-01 weaklyHypermeth 1.2936e-03 1.0000e+00 weaklyHypermeth 1.9123e-02 4.7900e-01 insignificant 1.0000e+00 insignificant 0.084685 0.027211 5.4465e-02 4 0.043328 0.118847 -0.0755191 5.1605e-01 1.1541e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 4.7607e-01 8.1698e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage -0.0476096 3.1169e-01 insignificant 1.000000 insignificant 0.050175 0.005694 5.0654e-02 7 0.044368 0.0369773 0.0073909 1.5002e-03 9.9898e-01 weaklyHypermeth 3.0379e-02 1.0000e+00 weaklyHypermeth 4.7746e-03 9.9375e-01 weaklyHypermeth 1.0851e-01 1.0000e+00 insignificant 0.0182621 5.3042e-01 insignificant 1.0000e+00 insignificant 0.050428 0.027211 0.0158644 4 0.103120 0.118847 -0.01572723 9.2636e-01 0.0636995 lowCoverage 1.0000e+00 1.0000 lowCoverage 9.9591e-01 0.7600875 lowCoverage 1.0000e+00 1 lowCoverage -0.04847029 0.31279783 insignificant 1.00000 insignificant 0.005694 0.027325 -0.0347515 4 0.0369773 0.166386 -0.12940901 9.9991e-01 1.4838e-02 lowCoverage 1.0000e+00 2.7478e-01 lowCoverage 9.9998e-01 1.0618e-03 lowCoverage 1.0000e+00 4.6163e-02 lowCoverage -0.0667324 1.9965e-01 insignificant 1.0000000 insignificant chr14 77338450 77339450 45929 ADCK1 ENSG00000063761 0.837239 213 8 0.7175931 157 8 0.5805954 101 8 0.868123 180 8 0.8641326 103 8 0.8490122 296 8 0.712298 103 8 0.808928 175 8 0.7540258 124 8 0.8798493 105 8 0.757196 280 8 0.955556 20 1 0.8448974 137 8 0.767138 60 7 0.8731812 121 8 0.8599440 62 7 0.8611111 31 1 0.776756 186 8 0.8912828 190 7 0.880828 308 8 0.827432 56 4 0.6759879 92 8 0.745973 125 8 0.633363 119 8 0.9018429 66 6 0.8932438 182 8 0.747738 136 6 0.7034028 76 5 0.6111135 135 7 0.780988 159 8 0.749961 166 8 0.740845 260 8 0.7593438 152 8 0.8006803 125 7 0.788832 104 7 0.5625000 14 1 0.8506775 110 5 0.6829303 221 8 0.8581369 235 8 0.8436619 194 8 0.8594967 183 7 0.9428377 162 7 0.942384 195 8 0.856794 0.7934463 0.694541 0.882532 0.8557470 0.8616457 0.742988 0.835608 0.788979 0.905404 0.877058 0.880646 0.875208 0.8198061 0.8922235 0.8497948 0.8824437 0.877579 0.8806750 0.890089 0.917898 0.7878748 0.861826 0.850293 0.920453 0.886909 0.784389 0.769767 0.903688 0.8359690 0.8015443 0.799980 0.7539108 0.8347619 0.839430 6.5010e-01 0.83492235 0.6628063 0.8643652 0.865741 0.8660769 0.9261337 0.957423 4 0.849255 0.840866 0.0068951 8 0.735620 0.667420 0.06819954 2.2784e-02 4.2439e-01 weaklyHypermeth 1.0000000 1.0000000 insignificant 1.3703e-01 0.7242291 insignificant 1.0000e+00 1.00000 insignificant 0.06599351 0.0535868 insignificant 1 insignificant 0.849729 0.754483 0.0892553 8 0.814160 0.770729 0.0434312 1.1718e-06 9.7890e-01 weaklyHypermeth 3.3481e-05 1.0000e+00 weaklyHypermeth 2.6324e-03 9.8859e-01 weaklyHypermeth 7.1147e-02 1.0000e+00 weaklyHypermeth 7.6157e-02 1.4276e-01 insignificant 1.0000e+00 insignificant 0.849729 0.882353 -3.0688e-02 7 0.814160 0.883013 -0.0688537 9.3269e-01 1.4999e-03 weaklyHypometh 1.0000e+00 2.4998e-01 insignificant 9.9916e-01 3.5155e-03 weaklyHypometh 1.0000e+00 0.61562395 insignificant -0.0723192 2.9792e-02 weaklyHypometh 1.000000 insignificant 0.843890 0.754821 7.8608e-02 8 0.800904 0.7936557 0.0072486 4.3567e-03 9.7489e-01 weaklyHypermeth 7.3843e-02 1.0000e+00 weaklyHypermeth 6.6926e-02 9.4172e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0101634 8.4258e-01 insignificant 1.0000e+00 insignificant 0.843790 0.882353 -0.0423304 7 0.778783 0.883013 -0.10423083 9.9792e-01 0.0074444 weaklyHypometh 1.0000e+00 1.0000 insignificant 9.9880e-01 0.0069976 weaklyHypometh 1.0000e+00 1 insignificant -0.13831271 0.00129246 weaklyHypometh 0.32311 insignificant 0.754483 0.882353 -0.1278652 7 0.7707286 0.883013 -0.11228486 1.0000e+00 6.7609e-05 weaklyHypometh 1.0000e+00 2.5040e-03 weaklyHypometh 9.9999e-01 5.6248e-04 weaklyHypometh 1.0000e+00 3.1249e-02 weaklyHypometh -0.1484761 1.5687e-02 weaklyHypometh 0.4239600 insignificant chr14 80965750 80966750 45973 STON2 ENSG00000140022 0.791352 108 5 0.7441679 141 6 0.7187500 46 5 0.601786 77 5 0.6621315 38 5 0.7421739 144 6 0.722103 63 5 0.699830 53 6 0.7500000 31 2 0.6666667 60 5 0.728553 149 6 0.646825 31 4 0.7989418 57 6 1.000000 17 2 0.8416667 37 5 0.7261905 28 4 0.7450000 36 4 0.752998 90 5 0.6816327 54 6 0.595623 91 5 0.988095 24 2 0.6894444 33 4 0.686455 79 6 0.639683 45 5 0.6083333 109 5 0.6901043 120 6 0.722222 38 3 0.8055556 17 0 0.8333333 45 4 0.750421 107 6 0.769980 125 6 0.697158 177 5 0.7088574 137 6 0.5582912 79 6 0.670439 161 6 0.5384615 36 1 0.7569109 59 6 0.5544038 68 5 0.5297271 113 5 0.7628205 110 5 0.7316850 83 5 0.7107744 50 5 0.783069 93 6 0.755985 0.6986798 0.747525 0.605479 0.7384881 0.6971158 0.676815 0.688590 0.702970 0.613861 0.630160 0.654644 0.761119 0.7179641 0.8198020 0.6746818 0.7286960 0.709060 0.5652994 0.675268 0.988685 0.6890478 0.639524 0.558856 0.499175 0.646626 0.729373 0.782178 0.801980 0.7208721 0.7314081 0.642564 0.6843006 0.5494549 0.569633 5.6557e-01 0.78347692 0.5355389 0.5981124 0.723860 0.6827331 0.6599660 0.743360 0 0.744634 0.730141 0.0137719 5 0.719940 0.720239 -0.00029872 4.3777e-01 8.0876e-01 insignificant 1.0000000 1.0000000 insignificant 6.2728e-01 0.7532080 insignificant 1.0000e+00 1.00000 insignificant -0.00924577 0.7961100 lowCoverage 1 lowCoverage 0.744634 0.612963 0.1218229 6 0.719940 0.650199 0.0697414 3.7806e-05 9.4499e-01 weaklyHypermeth 9.2210e-04 1.0000e+00 weaklyHypermeth 6.2469e-04 9.6670e-01 weaklyHypermeth 2.0151e-02 1.0000e+00 weaklyHypermeth 9.9592e-02 4.8615e-02 lowCoverage 1.0000e+00 lowCoverage 0.744981 0.750557 -4.0055e-03 5 0.728819 0.722793 0.0060265 7.2235e-01 6.3716e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.0728e-01 8.0943e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0272045 6.0268e-01 lowCoverage 1.000000 lowCoverage 0.730141 0.612963 1.2441e-01 5 0.720239 0.6501988 0.0700402 2.3712e-03 8.8842e-01 weaklyHypermeth 4.3112e-02 1.0000e+00 weaklyHypermeth 9.6865e-03 9.9647e-01 weaklyHypermeth 1.9768e-01 1.0000e+00 insignificant 0.1088381 4.4285e-02 lowCoverage 9.9186e-01 lowCoverage 0.729759 0.750557 -0.0182382 5 0.706946 0.722793 -0.01584717 8.9294e-01 0.4433904 insignificant 1.0000e+00 1.0000 insignificant 7.1034e-01 0.5455684 insignificant 1.0000e+00 1 insignificant 0.03645026 0.51870850 lowCoverage 1.00000 lowCoverage 0.612663 0.750557 -0.1702064 5 0.6474542 0.722793 -0.07533845 8.9677e-01 1.8444e-02 weaklyHypometh 1.0000e+00 3.1800e-01 insignificant 9.3505e-01 8.6499e-03 weaklyHypometh 1.0000e+00 2.2763e-01 insignificant -0.0723878 2.5366e-01 insignificant 1.0000000 insignificant chr14 90363850 90364850 46055 TTC7B ENSG00000165914 0.0860616 1452 14 0.0144928 501 14 0.032543 421 14 0.1484006 1028 14 0.0221948 405 15 0.040967 993 14 0.0809663 550 18 0.0167077 508 14 0.1948483 336 14 0.0264394 530 14 0.097705 598 14 0.0417989 263 14 0.1589744 236 14 0.0261842 274 14 0.0176685 525 14 0.1087607 274 14 0.3333333 3 0 0.0885657 2680 14 0.015973 578 14 0.200271 954 14 0.014286 266 14 0.000000 381 12 0.060523 592 14 0.0252101 268 14 0.0609971 344 14 0.1684511 586 14 0.039609 548 14 0.076814 207 14 0.094899 566 14 0.0663178 626 14 0.0580411 586 14 0.099632 779 14 0.0060575 295 14 0.0000000 609 14 0.0029070 613 8 0.142857 67 5 0.0918339 320 14 0.0149573 715 14 0.168289 1342 15 0.1455365 836 14 0.1181877 921 14 0.2006292 1379 14 0.051193 920 14 0.021662 0.0127102 0.0271182 0.0388087 0.0276755 0.032852 0.039372 0.0139426 0.0171663 0.0335205 0.041766 0.051935 0.0204648 0.028905 0.0197468 0.0379359 NA 0.0332595 0.012257 0.0336356 0.010963 0.0000000 0.044818 0.0234912 0.0125731 0.0398731 0.018426 0.035133 0.025053 0.0153392 0.0218118 0.040406 0.0099637 0.0000000 0.0025494 0.0068702 0.0070807 0.0147573 0.026455 0.0264238 0.02785788 0.0325131 0.0213146 14 0.039973 0.039833 0.00139707 14 0.115873 0.066165 0.04970819 7.0891e-01 0.96702449 insignificant 1.000000 1.000000 insignificant 0.64281359 0.9993338 insignificant 1.00000 1 insignificant 0.02391112 0.3019369 insignificant 1 insignificant 0.039866 0.0148912 0.0336746 14 0.113035 0.0730245 0.0400105 2.1850e-03 9.9955e-01 weaklyHypermeth 2.7658e-02 1.0000e+00 weaklyHypermeth 1.1210e-02 1.0000e+00 weaklyHypermeth 1.9327e-01 1.0000e+00 insignificant 0.04454068 1.7503e-01 insignificant 1.0000e+00 insignificant 0.039976 0.0498333 0.0014479 14 0.119869 0.185544 -0.0656756 7.9696e-01 8.5300e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.9706e-01 9.5200e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0491242 1.5321e-01 insignificant 1.0000000 insignificant 0.039882 0.0148912 0.0322190 14 0.073516 0.0730245 0.00049189 6.4496e-02 1.0000e+00 insignificant 5.5125e-01 1.0000e+00 insignificant 3.1900e-01 1.0000e+00 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0206296 4.7755e-01 insignificant 1.0000e+00 insignificant 0.039840 0.0498333 -0.00087582 14 0.068446 0.185544 -0.1170978 9.1088e-01 9.8929e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9393e-01 6.9444e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.07303528 4.1120e-02 weaklyHypometh 1.000000 insignificant 0.0145204 0.0493415 -0.03161863 14 0.0566024 0.168492 -0.11188916 1.0000e+00 5.3023e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.0000e+00 4.1647e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.0936648 2.6498e-02 weaklyHypometh 0.5059415 insignificant chr14 90951350 90952350 46067 CCDC88C ENSG00000015133 0.5804038 220 7 0.6110377 157 7 0.604080 169 7 0.6555361 135 7 0.5696699 90 7 0.664834 318 7 0.3888173 122 6 0.4864127 114 7 0.6095859 79 6 0.6613876 97 6 0.726036 236 7 0.6130682 51 5 0.6091004 132 7 0.9333333 8 1 0.6028659 146 6 0.4688645 72 6 0.5091575 58 6 0.6162005 129 7 0.667877 181 7 0.712941 262 7 0.694129 69 7 0.622781 95 7 0.693591 165 7 0.6239805 85 7 0.6454167 38 3 0.6726758 210 7 0.748934 62 5 0.746152 45 4 0.733844 122 6 0.6663588 194 7 0.6137071 238 9 0.654366 336 7 0.6070980 151 7 0.4489316 85 7 0.6245686 168 7 0.712500 50 6 0.5376623 77 6 0.5969913 166 7 0.661632 191 7 0.6987467 199 7 0.6627548 182 7 0.6301620 212 6 0.409034 228 7 0.662190 0.6276500 0.6190029 0.6709361 0.6542804 0.688328 0.629635 0.7010412 0.5922543 0.6549340 0.647030 0.682160 0.6827316 0.681181 0.5901864 0.5668188 0.5696915 0.6806700 0.664478 0.6687562 0.810760 0.6901403 0.696326 0.6557061 0.7886476 0.6890622 0.710371 0.736036 0.603859 0.6084291 0.6180522 0.658879 0.6071088 0.5164376 0.5868299 0.7337629 0.5378146 0.5698419 0.651585 0.7361205 0.70677740 0.6664156 0.6156311 6 0.656700 0.681736 -0.01548688 7 0.606382 0.670803 -0.06442055 8.9446e-01 0.04670186 weaklyHypometh 1.000000 1.000000 insignificant 0.87116878 0.0492023 weaklyHypometh 1.00000 1 insignificant -0.06176747 0.0388810 weaklyHypometh 1 insignificant 0.656700 0.6212339 0.0517095 7 0.606382 0.5894851 0.0168972 3.6640e-04 3.8904e-01 weaklyHypermeth 5.1606e-03 1.0000e+00 weaklyHypermeth 2.0274e-02 7.7598e-01 weaklyHypermeth 3.3236e-01 1.0000e+00 insignificant 0.02660184 5.5763e-01 insignificant 1.0000e+00 insignificant 0.656700 0.6818182 -0.0174054 7 0.606382 0.500201 0.1061810 9.1531e-02 1.1195e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.3203e-01 2.8429e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0020945 9.7221e-01 insignificant 1.0000000 insignificant 0.681736 0.6212339 0.0603502 7 0.670803 0.5894851 0.08131776 3.0820e-04 9.1411e-01 weaklyHypermeth 5.3138e-03 1.0000e+00 weaklyHypermeth 2.5858e-03 9.7962e-01 weaklyHypermeth 5.8768e-02 1.0000e+00 weaklyHypermeth 0.0883693 5.9036e-02 insignificant 9.2335e-01 insignificant 0.681736 0.6818182 -0.00375724 7 0.670803 0.500201 0.1706015 6.9624e-03 2.7247e-01 inconclusive 2.0478e-01 1.0000e+00 insignificant 1.2891e-01 4.3429e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.06386200 2.9321e-01 insignificant 1.000000 insignificant 0.6212339 0.6818182 -0.05369751 7 0.5894851 0.500201 0.08928378 1.1117e-01 4.0175e-03 weaklyHypometh 1.0000e+00 6.6959e-02 weaklyHypometh 8.6107e-01 9.4052e-02 insignificant 1.0000000 1.0000e+00 insignificant -0.0245073 7.0961e-01 insignificant 1.0000000 insignificant chr14 92571750 92572750 46084 CHGA ENSG00000100604 0.7315852 297 8 0.7135307 266 8 0.615429 190 9 0.8835175 341 8 0.7327186 105 9 0.727453 447 9 0.7169530 242 9 0.7510182 217 9 0.7427020 283 9 0.7919650 195 9 0.865817 278 9 0.7657710 117 6 0.4866201 229 8 0.7383271 128 5 0.7044960 198 9 0.5612963 72 6 0.6224868 65 6 0.5593111 364 8 0.710546 203 9 0.711516 255 9 0.717767 113 9 0.439127 129 4 0.825813 167 6 0.7640998 83 7 0.7645255 259 6 0.7937562 332 9 0.794048 74 7 0.832804 81 8 0.654159 199 8 0.6826489 350 9 0.8366259 335 9 0.873620 359 9 0.4402417 219 9 0.4600770 187 9 0.5780051 231 8 0.351841 234 7 0.4231787 233 9 0.5187055 364 9 0.381004 356 9 0.5410912 261 9 0.3560137 227 7 0.4617045 263 7 0.581965 247 7 0.785766 0.6900915 0.6496718 0.8321438 0.7694779 0.802542 0.823676 0.7629692 0.8367066 0.8246861 0.857808 0.852754 0.5633979 0.814512 0.7734117 0.5870891 0.6386707 0.5729235 0.708444 0.7614855 0.883100 0.3489307 0.819998 0.6708773 0.7721222 0.7919139 0.774768 0.838134 0.767356 0.7554947 0.8261753 0.882212 0.6465689 0.6117326 0.6740340 0.4591638 0.7052920 0.5788736 0.360122 0.5318076 0.38941545 0.4519166 0.5697040 5 0.752171 0.780242 -0.02845519 9 0.718764 0.781981 -0.06321742 9.9258e-01 0.16477384 insignificant 1.000000 1.000000 insignificant 0.98950092 0.1192588 insignificant 1.00000 1 insignificant -0.04159653 0.3134772 insignificant 1 insignificant 0.752171 0.5262440 0.1904321 9 0.718764 0.4759569 0.2428068 1.6695e-22 9.5413e-01 weaklyHypermeth 1.1925e-20 1.0000e+00 weaklyHypermeth 6.6672e-08 7.3603e-01 weaklyHypermeth 4.4448e-06 1.0000e+00 weaklyHypermeth 0.24464490 8.2855e-05 hypermethylated 4.8738e-03 hypermethylated 0.753688 0.4992614 0.2807246 8 0.730130 0.442770 0.2873598 3.4037e-22 1.0000e+00 hypermethylated 1.1346e-19 1.0000e+00 hypermethylated 4.9985e-11 1.0000e+00 hypermethylated 1.6662e-08 1.0000000 hypermethylated 0.2422973 2.4108e-03 weaklyHypermeth 0.1135123 insignificant 0.780242 0.5262440 0.2251596 9 0.781981 0.4759569 0.30602417 4.1627e-23 9.9479e-01 hypermethylated 4.6252e-21 1.0000e+00 hypermethylated 3.2300e-06 9.0958e-01 hypermethylated 1.6423e-04 1.0000e+00 hypermethylated 0.2862414 2.3258e-05 hypermethylated 1.5775e-03 hypermethylated 0.780606 0.4992614 0.29427483 8 0.787796 0.442770 0.3450258 2.4431e-18 1.0000e+00 hypermethylated 8.1436e-16 1.0000e+00 hypermethylated 1.9852e-08 1.0000e+00 hypermethylated 6.6173e-06 1.0000e+00 hypermethylated 0.28389384 6.1662e-04 hypermethylated 0.068513 hypermethylated 0.5273973 0.4992614 0.04394085 8 0.4564339 0.442770 0.01366392 1.1422e-04 9.3689e-04 weaklyHypermeth 1.2691e-02 1.9934e-02 weaklyHypermeth 5.5015e-02 1.7657e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.0023476 9.6661e-01 insignificant 1.0000000 insignificant chr14 92585250 92586250 46087 CHGA ENSG00000100604 0.8548364 162 4 0.5539068 199 6 0.682719 104 5 0.7409266 192 5 0.6633250 85 6 0.701931 254 6 0.7507215 113 6 0.7878636 155 5 0.5619883 120 5 0.8604363 92 3 0.798241 219 6 0.7649425 74 3 0.5262204 116 5 0.6228228 83 2 0.5307067 109 3 0.5527778 28 3 0.7386593 1698 2 0.5432835 264 5 0.735714 105 5 0.615102 144 5 0.667216 68 6 0.451479 53 3 0.850529 80 6 0.6666667 43 5 0.6956697 116 6 0.7191697 207 6 0.646540 63 5 0.732527 60 5 0.757955 108 5 0.6198065 189 6 0.6902357 123 6 0.751841 223 5 0.6873769 99 5 0.7411616 68 5 0.6775253 213 5 0.799316 90 5 0.5054954 104 6 0.4770634 143 6 0.494490 188 6 0.3191154 146 4 0.3049965 159 5 0.2846951 163 2 0.348982 162 6 0.820282 0.5646909 0.7393417 0.8472902 0.7095136 0.774191 0.838055 0.8056962 0.7178925 0.8690409 0.819658 0.841319 0.6021374 0.640259 0.5823808 0.7984496 0.6811910 0.6917392 0.746179 0.7163155 0.737193 0.5267197 0.854522 0.9883721 0.7777295 0.8126225 0.713600 0.738200 0.767037 0.7709221 0.7884954 0.832061 0.7090991 0.8084038 0.7769996 0.8276065 0.6954478 0.7624714 0.671451 0.5858098 0.53543477 0.4796478 0.6149796 3 0.676477 0.739489 -0.07902506 5 0.660357 0.705913 -0.04555514 9.1382e-01 0.00232340 weaklyHypometh 1.000000 0.331914 insignificant 0.54375581 0.1087140 insignificant 1.00000 1 insignificant -0.00811328 0.8285366 lowCoverage 1 lowCoverage 0.676552 0.6745810 -0.0566173 5 0.708878 0.5870854 0.1217924 3.9825e-01 1.9055e-03 weaklyHypometh 1.0000e+00 1.2704e-01 insignificant 5.4388e-01 3.6621e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03136646 6.0605e-01 lowCoverage 1.0000e+00 lowCoverage 0.676477 0.6308068 0.0491184 5 0.660357 0.377589 0.2827688 9.2650e-13 9.0986e-01 weaklyHypermeth 1.1581e-10 1.0000e+00 weaklyHypermeth 1.0420e-07 1.0000e+00 weaklyHypermeth 1.1578e-05 1.0000000 weaklyHypermeth 0.3289004 8.7772e-05 lowCoverage 0.0146287 lowCoverage 0.738935 0.6755245 0.0320130 5 0.605068 0.5870854 0.01798249 1.4778e-01 1.8826e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.8565e-01 5.2642e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0394797 5.2671e-01 insignificant 1.0000e+00 insignificant 0.739489 0.6308068 0.22055107 5 0.705913 0.377589 0.3283239 8.2337e-16 1.0000e+00 hypermethylated 1.6467e-13 1.0000e+00 hypermethylated 1.7578e-07 1.0000e+00 hypermethylated 2.5111e-05 1.0000e+00 hypermethylated 0.33701369 6.1189e-05 lowCoverage 0.018948 lowCoverage 0.6764706 0.6308068 0.26240154 5 0.6849329 0.377589 0.30734433 6.9065e-06 1.0000e+00 hypermethylated 9.8664e-04 1.0000e+00 hypermethylated 3.0183e-05 1.0000e+00 hypermethylated 0.0060366 1.0000e+00 hypermethylated 0.2975340 1.4661e-03 lowCoverage 0.1163663 lowCoverage chr14 95803850 95804850 46119 BDKRB1 ENSG00000100739 0.9033399 110 5 0.7833766 60 5 0.593333 17 2 0.9208223 112 5 0.6666667 6 0 0.940434 150 5 0.3333333 11 0 0.8636364 68 5 0.9600000 19 1 0.9214286 42 5 0.898351 139 5 1.0000000 3 0 0.9551515 61 5 NA 0 0 0.9666667 24 2 0.5000000 2 0 1.0000000 12 0 0.8383941 153 5 0.966434 58 5 0.843161 158 5 0.925556 77 5 0.975000 90 5 0.845000 71 5 0.8719888 55 5 0.8100000 35 5 0.8768271 97 5 0.888929 66 5 0.658333 18 3 0.922995 57 5 0.9286120 109 5 0.9420846 86 5 0.944747 148 5 0.9503030 60 5 0.9888889 70 5 0.7187500 21 3 0.933333 12 0 0.9250000 34 5 0.9840000 98 5 0.807108 60 5 0.7328077 114 5 0.7166798 78 5 0.6323077 84 5 0.851912 80 5 0.869222 0.7808442 0.4814815 0.9384815 0.7103538 0.967774 0.412037 0.8958333 0.9444444 0.9100529 0.898424 0.988132 0.9722222 NA 1.0000000 0.8675890 0.9881316 0.8028503 0.974747 0.8560704 0.948765 0.9652778 0.848958 0.8619670 0.8993056 0.8842015 0.912401 0.759259 0.987374 0.9414483 0.9422371 0.942004 0.9469697 0.9830247 0.8229167 1.0000000 0.8958333 0.9755556 0.771855 0.7334747 0.76954326 0.6064103 0.8449755 0 0.882158 0.910891 -0.02965116 5 0.882210 0.910977 -0.02876663 9.4566e-01 0.12088343 insignificant 1.000000 1.000000 insignificant 0.56106976 0.4429933 insignificant 1.00000 1 insignificant -0.04805713 0.3326812 lowCoverage 1 lowCoverage 0.882158 0.9593220 -0.0784189 5 0.882210 0.9603960 -0.0781856 9.9825e-01 6.9853e-03 weaklyHypometh 1.0000e+00 3.6765e-01 insignificant 9.9818e-01 8.7351e-03 weaklyHypometh 1.0000e+00 5.4595e-01 insignificant -0.08226368 1.8072e-01 lowCoverage 1.0000e+00 lowCoverage 0.882158 0.7427885 0.1328057 5 0.882210 0.753548 0.1286622 5.2485e-06 9.9998e-01 weaklyHypermeth 3.4990e-04 1.0000e+00 weaklyHypermeth 1.9388e-04 9.9998e-01 weaklyHypermeth 1.4914e-02 1.0000000 weaklyHypermeth 0.0862859 1.4943e-01 lowCoverage 1.0000000 lowCoverage 0.910891 0.9593220 -0.0456895 5 0.910977 0.9603960 -0.04941900 9.9608e-01 1.8699e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9951e-01 5.1634e-03 weaklyHypometh 1.0000e+00 3.9719e-01 insignificant -0.0342066 4.9222e-01 lowCoverage 1.0000e+00 lowCoverage 0.910891 0.7427885 0.16654716 5 0.910977 0.753548 0.1574288 8.9293e-11 9.9999e-01 weaklyHypermeth 8.9293e-09 1.0000e+00 weaklyHypermeth 1.5529e-06 9.9970e-01 weaklyHypermeth 1.5529e-04 1.0000e+00 weaklyHypermeth 0.13434302 1.9057e-02 lowCoverage 0.828580 lowCoverage 0.9593220 0.7427885 0.21462301 5 0.9603960 0.753548 0.20684780 3.9919e-09 1.0000e+00 hypermethylated 9.9797e-07 1.0000e+00 hypermethylated 1.0617e-05 1.0000e+00 hypermethylated 0.0026542 1.0000e+00 hypermethylated 0.1685496 1.4608e-02 lowCoverage 0.3764611 lowCoverage chr14 99081050 99082050 46136 CCNK ENSG00000090061 0.8613371 312 8 0.6376892 401 8 0.816644 251 8 0.8462117 298 8 0.8680869 143 8 0.877649 330 8 0.6583886 194 7 0.8438685 338 8 0.7880572 252 8 0.8062376 212 8 0.837163 381 8 0.8906926 80 6 0.8023166 337 8 0.8556834 182 8 0.7151482 189 8 0.7190657 52 6 0.5523810 23 1 0.8135485 405 8 0.760587 307 8 0.786425 251 8 0.701016 170 8 0.583196 175 8 0.777845 181 8 0.6877362 221 8 0.8244892 147 8 0.8845442 518 8 0.684636 213 8 0.576317 89 7 0.886940 333 8 0.8401989 590 8 0.8220766 536 8 0.824704 351 8 0.5411315 319 8 0.5325664 139 8 0.5071481 612 6 0.690625 49 6 0.4884256 297 8 0.7962928 422 8 0.471215 214 8 0.4654050 224 8 0.6191317 172 8 0.6332999 201 8 0.749165 184 8 0.870643 0.7356378 0.8160130 0.8184202 0.8980715 0.877725 0.736655 0.8302234 0.7883983 0.8667194 0.844122 0.885598 0.7805041 0.842076 0.7296233 0.7250625 0.5902912 0.7954871 0.818764 0.7666339 0.848369 0.5881630 0.875874 0.7413768 0.8007016 0.8368785 0.785753 0.780178 0.881248 0.8177017 0.7959622 0.832667 0.5265018 0.4615931 0.5087923 0.7066624 0.6003184 0.7599956 0.548974 0.4732730 0.65736873 0.6567074 0.7223396 6 0.811260 0.821510 -0.00454479 8 0.655210 0.696579 -0.04136833 8.5729e-01 0.35892048 insignificant 1.000000 1.000000 insignificant 0.86551845 0.6943123 insignificant 1.00000 1 insignificant 0.02905083 0.4439214 insignificant 1 insignificant 0.811348 0.5892274 0.2251194 8 0.686252 0.4963162 0.1899362 1.5521e-15 9.9994e-01 hypermethylated 6.4672e-14 1.0000e+00 hypermethylated 3.2768e-06 9.9997e-01 hypermethylated 1.4247e-04 1.0000e+00 hypermethylated 0.19416084 9.5482e-03 weaklyHypermeth 2.0757e-01 insignificant 0.811638 0.5638191 0.2232899 8 0.725466 0.521347 0.2041183 1.2228e-20 1.0000e+00 hypermethylated 3.0570e-18 1.0000e+00 hypermethylated 2.1255e-09 1.0000e+00 hypermethylated 5.0668e-07 1.0000000 hypermethylated 0.1992156 1.6813e-02 weaklyHypermeth 0.4424451 insignificant 0.821591 0.5892274 0.2324070 8 0.669228 0.4963162 0.17291151 7.0622e-09 9.9999e-01 hypermethylated 2.2069e-07 1.0000e+00 hypermethylated 8.5930e-05 1.0000e+00 hypermethylated 3.1826e-03 1.0000e+00 hypermethylated 0.1651100 2.0938e-02 weaklyHypermeth 4.2731e-01 insignificant 0.822709 0.5638191 0.21904961 8 0.725068 0.521347 0.2037206 3.5110e-14 1.0000e+00 hypermethylated 3.9012e-12 1.0000e+00 hypermethylated 3.3265e-07 1.0000e+00 hypermethylated 4.1581e-05 1.0000e+00 hypermethylated 0.17016476 2.9466e-02 weaklyHypermeth 0.920812 insignificant 0.5895482 0.5638191 -0.02817780 8 0.5514624 0.521347 0.03011517 2.1862e-01 5.5539e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.5746e-01 8.6662e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.0050547 9.4671e-01 insignificant 1.0000000 insignificant chr14 99293050 99294050 46145 CYP46A1 ENSG00000036530 0.8061179 148 7 NA 0 0 NA 0 0 0.6643262 189 6 NA 0 0 0.637363 109 5 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 0.3333333 6 0 0.6249896 146 6 0.603175 26 2 0.798611 85 6 NA 0 0 NA 0 0 0.628348 82 7 NA 0 0 NA 0 0 0.7057930 141 6 NA 0 0 NA 0 0 NA 0 0 0.7469875 131 6 0.7534061 127 6 0.651547 131 6 NA 0 0 NA 0 0 0.7056277 69 4 0.760000 13 2 NA 0 0 0.7387218 97 6 0.811339 88 5 0.6099117 173 6 0.8174260 282 6 0.8072917 78 6 0.689242 236 6 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0.749292 0.808824 0.01165665 4 0.708327 0.696957 0.01137021 3.5260e-01 0.70677745 lowCoverage 1.000000 1.000000 lowCoverage 0.35111163 0.8135790 lowCoverage 1.00000 1 lowCoverage -0.05894256 0.3884347 lowCoverage 1 lowCoverage 0.750367 0.6368715 0.0166806 2 0.723007 0.7007937 0.0222136 5.5127e-01 3.7448e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.8013e-01 5.9933e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.09650955 1.6268e-01 lowCoverage 1.0000e+00 lowCoverage 0.749292 0.8133022 -0.0015087 4 0.708327 0.724952 -0.0166243 5.4566e-01 8.7751e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.2712e-01 7.7284e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage -0.1087685 1.6628e-01 lowCoverage 1.0000000 lowCoverage 0.805461 0.6368715 -0.0023632 2 0.651497 0.7007937 -0.04929646 6.5229e-01 1.0879e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.6084e-01 5.1471e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0375670 2.5208e-01 lowCoverage 1.0000e+00 lowCoverage 0.808824 0.8133022 -0.00706446 5 0.696957 0.724952 -0.0279945 8.4377e-01 4.8996e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7599e-01 7.3045e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04982595 3.4240e-01 lowCoverage 1.000000 lowCoverage 0.6368715 0.8119859 -0.00751001 3 0.7007937 0.607074 0.09371996 1.4143e-01 5.4937e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 2.6163e-01 9.9009e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage -0.0122590 7.9458e-01 lowCoverage 1.0000000 lowCoverage chr14 99613950 99614950 46150 EVL ENSG00000196405 0.7942059 480 10 0.7745806 480 10 0.789152 189 10 0.7480939 416 10 0.7478992 55 4 0.790648 528 10 0.7399267 79 4 0.8648618 167 7 0.7309854 85 7 0.7777778 56 7 0.805468 422 8 0.7500000 23 0 0.8137460 126 7 0.7840136 42 1 0.8002976 90 7 0.8600000 26 1 0.8666667 803 1 0.7979557 335 10 0.859653 122 7 0.831941 372 10 0.885985 99 7 0.763611 82 7 0.672067 210 8 0.7416667 66 5 0.8348320 119 7 0.8356066 389 10 0.756040 118 7 0.802083 35 1 0.827957 187 7 0.8157402 373 10 0.7529309 413 10 0.782074 509 10 0.8155508 265 10 0.6966300 163 8 0.8662656 357 10 0.642857 23 1 0.6711882 145 7 0.7396825 358 10 0.787444 391 10 0.8071546 452 10 0.7851487 542 10 0.7079980 305 10 0.685091 468 10 0.798493 0.7308200 0.8092690 0.7710558 0.7606272 0.774670 0.634177 0.8308747 0.6975829 0.7763975 0.775258 0.747792 0.7979266 0.812935 0.8232032 0.8391304 0.8206738 0.8126297 0.851834 0.8229203 0.838133 0.7876720 0.829913 0.7429262 0.8233111 0.8009605 0.724245 0.811077 0.810040 0.7819788 0.7988301 0.756252 0.7589250 0.7464963 0.8830254 0.5155042 0.7446861 0.7846987 0.741422 0.7531704 0.74197955 0.6693686 0.7835594 1 0.835513 0.817167 0.00503227 10 0.811183 0.802757 0.00842543 4.1508e-01 0.67235911 insignificant 1.000000 1.000000 insignificant 0.73400283 0.3736114 insignificant 1.00000 1 insignificant 0.00717748 0.7083691 insignificant 1 insignificant 0.835513 0.8337147 -0.0004630 10 0.811183 0.7239317 0.0872509 1.9994e-01 5.3680e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8162e-02 4.5540e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.05769793 1.6927e-01 insignificant 1.0000e+00 insignificant 0.835513 0.7706209 0.0732611 10 0.811183 0.741528 0.0696550 1.8608e-04 7.0530e-01 weaklyHypermeth 1.0338e-02 1.0000e+00 weaklyHypermeth 5.6097e-03 8.1458e-01 weaklyHypermeth 2.4390e-01 1.0000000 insignificant 0.0418263 1.6627e-01 insignificant 1.0000000 insignificant 0.817167 0.8337147 -0.0055144 10 0.802757 0.7239317 0.07882544 8.2759e-02 6.6192e-01 insignificant 6.6741e-01 1.0000e+00 insignificant 1.6136e-01 8.9070e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0505205 2.3537e-01 insignificant 1.0000e+00 insignificant 0.817167 0.7706209 0.05266461 10 0.802757 0.741528 0.0612296 1.4702e-03 8.4145e-01 weaklyHypermeth 5.6546e-02 1.0000e+00 weaklyHypermeth 6.4295e-03 9.9576e-01 weaklyHypermeth 3.2148e-01 1.0000e+00 insignificant 0.03464883 2.7058e-01 insignificant 1.000000 insignificant 0.8337147 0.7706209 0.05189399 10 0.7239317 0.741528 -0.01759589 9.8916e-02 4.0767e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.1623e-01 6.0495e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.0158716 7.2085e-01 insignificant 1.0000000 insignificant chr14 99678450 99679450 46153 MIR342 ENSG00000199082 0.8782381 337 7 0.7527948 230 8 0.872988 148 7 0.8563841 302 7 0.8941672 94 7 0.911416 349 7 0.8098632 138 7 0.8584455 200 8 0.8466100 135 7 0.8058862 123 7 0.831624 301 8 0.7280812 55 4 0.9204000 178 6 0.9639098 79 6 0.7801865 108 6 0.8965875 49 4 0.8642857 20 2 0.6881179 351 6 0.851184 195 7 0.881548 276 7 0.895880 150 8 0.882853 101 6 0.789192 168 7 0.8105100 128 8 0.9063468 145 7 0.8540578 273 8 0.786344 178 7 0.891258 74 6 0.901488 231 7 0.8737856 284 8 0.8997478 252 8 0.840852 301 7 0.8784759 168 8 0.7680579 181 8 0.9582181 142 5 0.860714 56 4 0.7723986 150 8 0.7573710 304 8 0.920261 144 7 0.6917062 224 6 0.8891184 197 5 0.8109803 216 5 0.799533 171 7 0.925507 0.7551910 0.8918937 0.9109221 0.9230266 0.922061 0.816253 0.8730171 0.8132134 0.8765071 0.832809 0.699837 0.9433732 0.970923 0.8278822 0.8638918 0.8784002 0.7971685 0.938860 0.8760671 0.937535 0.8776304 0.813299 0.8441336 0.9175515 0.8993638 0.827082 0.899456 0.905303 0.8856935 0.9101168 0.889700 0.8723388 0.7955833 0.9554434 0.9246926 0.9233607 0.8185051 0.934839 0.7654133 0.86421961 0.8308608 0.8441148 5 0.874523 0.881838 -0.00663429 7 0.861075 0.859570 0.00150511 7.2472e-01 0.55377413 insignificant 1.000000 1.000000 insignificant 0.48832640 0.5360873 insignificant 1.00000 1 insignificant -0.01639028 0.4154655 insignificant 1 insignificant 0.874557 0.8461538 0.0220777 7 0.876511 0.7318514 0.1446600 1.2715e-01 6.0945e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.5714e-01 2.0240e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01209663 7.4673e-01 insignificant 1.0000e+00 insignificant 0.874523 0.8382353 0.0459294 6 0.861075 0.814296 0.0467790 1.2261e-02 8.3363e-01 weaklyHypermeth 3.5961e-01 1.0000e+00 insignificant 5.2554e-02 4.9803e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0223162 6.2213e-01 insignificant 1.0000000 insignificant 0.881838 0.8470000 0.0278458 8 0.859570 0.8233328 0.03623739 1.2475e-01 5.5453e-01 insignificant 9.6702e-01 1.0000e+00 insignificant 7.0456e-01 1.0441e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0284869 4.4594e-01 insignificant 1.0000e+00 insignificant 0.881838 0.8382353 0.04295163 6 0.859570 0.814296 0.0452739 2.0296e-02 8.6999e-01 weaklyHypermeth 4.7200e-01 1.0000e+00 insignificant 6.6308e-02 6.6346e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03870646 3.9883e-01 insignificant 1.000000 insignificant 0.8470000 0.8382353 0.02524635 6 0.8233328 0.814296 0.00903646 1.9072e-01 6.9951e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9356e-02 8.0108e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.0102196 8.4771e-01 insignificant 1.0000000 insignificant chr14 99727650 99728650 46154 DEGS2 ENSG00000168350 0.5566371 137 6 0.5566700 98 6 0.562500 39 6 0.5881257 138 6 0.4876603 56 5 0.576840 132 6 0.3912202 53 6 0.6476190 63 6 0.6242063 43 6 0.5476190 25 3 0.529456 158 6 0.7083333 30 3 0.6505102 36 3 0.5583333 43 3 0.6853741 58 6 0.6666667 12 0 0.3750000 7 0 0.5860016 161 6 0.621909 64 6 0.743676 116 7 0.471429 49 6 0.733333 24 3 0.505719 81 6 0.3863636 73 6 0.5984321 140 6 0.6269914 103 6 0.836538 132 5 0.345238 15 0 0.565801 111 6 0.6690146 74 6 0.7424971 78 6 0.603804 72 6 0.5304485 118 6 0.5351891 70 6 0.4661749 114 6 0.416667 9 0 0.4916667 78 6 0.5452946 119 6 0.629383 88 7 0.5594620 117 6 0.5825057 140 6 0.5134519 101 6 0.550369 123 6 0.606335 0.6112006 0.6140625 0.7061752 0.4564263 0.704261 0.518676 0.7150000 0.7653819 0.5145833 0.639601 0.728125 0.6323661 0.589167 0.8186012 0.6937500 0.5689029 0.6213875 0.774725 0.8155432 0.587500 0.7675000 0.696569 0.6039773 0.6063804 0.6981005 0.779732 0.458333 0.582652 0.6905481 0.7647582 0.743661 0.6326155 0.5576024 0.6414415 0.4562500 0.5164583 0.4816642 0.704821 0.6720049 0.69779412 0.6174118 0.6646205 0 0.636487 0.646008 0.00257911 6 0.594073 0.598225 -0.00415193 4.1464e-01 0.63687144 insignificant 1.000000 1.000000 insignificant 0.47295938 0.7105628 insignificant 1.00000 1 insignificant -0.00721218 0.8802890 lowCoverage 1 lowCoverage 0.637047 0.5551181 0.0928942 6 0.605832 0.4810384 0.1247939 1.3578e-03 9.9998e-01 weaklyHypermeth 1.7634e-02 1.0000e+00 weaklyHypermeth 1.8954e-03 9.9999e-01 weaklyHypermeth 4.1204e-02 1.0000e+00 weaklyHypermeth 0.08564446 9.4501e-03 lowCoverage 2.0757e-01 lowCoverage 0.637047 0.6537786 -0.0077339 6 0.605832 0.612253 -0.0064205 3.5447e-01 4.6714e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.0185e-01 6.6708e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0161835 5.7702e-01 lowCoverage 1.0000000 lowCoverage 0.645943 0.5551181 0.0917476 6 0.589670 0.4810384 0.10863145 5.8693e-04 9.9970e-01 weaklyHypermeth 8.8928e-03 1.0000e+00 weaklyHypermeth 2.7543e-03 9.9981e-01 weaklyHypermeth 5.9877e-02 1.0000e+00 weaklyHypermeth 0.0928566 6.6280e-02 insignificant 9.7964e-01 insignificant 0.645943 0.6537786 -0.00554279 6 0.589670 0.612253 -0.0225829 4.8427e-01 3.7583e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.6098e-01 5.9039e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02339567 6.2164e-01 insignificant 1.000000 insignificant 0.5551181 0.6537786 -0.10035143 6 0.4810384 0.612253 -0.13121435 9.9936e-01 1.0125e-03 weaklyHypometh 1.0000e+00 2.1093e-02 weaklyHypometh 9.9999e-01 1.0091e-02 weaklyHypometh 1.0000000 2.3159e-01 insignificant -0.0694610 3.4474e-02 weaklyHypometh 0.6093062 insignificant chr14 99738050 99739050 46155 DEGS2 ENSG00000168350 0.7599558 215 7 0.7461538 88 4 0.731168 61 4 0.7526320 238 7 0.6711310 36 4 0.633181 239 7 0.9099099 56 4 0.6965352 81 4 0.8596774 46 4 0.6861111 30 2 0.681564 123 4 0.9285714 8 1 0.6681818 43 4 0.6531250 31 4 0.5605263 34 4 0.5000000 10 0 0.8000000 8 0 0.6214355 271 7 0.624870 116 4 0.541307 187 7 0.682692 22 1 0.750000 9 1 0.632353 116 7 0.6761905 37 4 0.8833333 15 0 0.6718156 153 7 0.626667 27 1 0.852941 34 1 0.693452 58 4 0.6631919 168 7 0.6708583 160 7 0.585692 207 7 0.4965201 61 4 0.5500000 62 4 0.7592351 118 6 0.750000 57 4 0.6263736 61 4 0.7321436 169 7 0.664962 188 7 0.7745496 183 7 0.6698169 170 7 0.7619048 87 7 0.729809 195 9 0.824256 0.8276923 0.7563480 0.8334740 0.6598214 0.878341 0.935135 0.7694363 0.8512903 0.7227778 0.721133 0.802461 0.7281818 0.716875 0.6731579 0.7000000 1.0000000 0.8343277 0.797115 0.8557273 0.765385 0.8500000 0.659722 0.9071429 0.9125000 0.7699675 0.717148 0.766154 0.782738 0.8082798 0.8231353 0.780762 0.6009615 0.5300000 0.8144022 0.7596341 0.8082418 0.8313939 0.820417 0.8600014 0.80388889 0.8812500 0.8337176 0 0.715252 0.739563 -0.00282830 7 0.637128 0.607295 0.02983247 7.6202e-01 0.52851064 insignificant 1.000000 1.000000 insignificant 0.96428079 0.6400977 insignificant 1.00000 1 insignificant 0.00220295 0.9517919 lowCoverage 1 lowCoverage 0.716833 0.6496212 0.0713869 7 0.680499 0.6663078 0.0141913 3.2301e-02 9.9754e-01 weaklyHypermeth 3.1059e-01 1.0000e+00 insignificant 3.1610e-01 9.8772e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.04892310 3.7626e-01 lowCoverage 1.0000e+00 lowCoverage 0.715927 0.7010936 -0.0288870 7 0.658225 0.683183 -0.0249582 9.8592e-01 3.5711e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9614e-01 5.7035e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0189066 5.8815e-01 lowCoverage 1.0000000 lowCoverage 0.743719 0.6496212 0.0761821 7 0.661463 0.6663078 -0.00484428 1.1013e-02 9.9830e-01 weaklyHypermeth 1.2806e-01 1.0000e+00 insignificant 1.6760e-01 9.9303e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0467201 3.9793e-01 lowCoverage 1.0000e+00 lowCoverage 0.741036 0.7010936 -0.02582648 7 0.700726 0.683183 0.0175428 7.3824e-01 4.3886e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.5634e-01 8.8902e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02110959 5.4841e-01 lowCoverage 1.000000 lowCoverage 0.6489564 0.7029340 -0.09671098 7 0.6329386 0.788138 -0.15519903 9.9802e-01 1.6092e-02 weaklyHypometh 1.0000e+00 2.0370e-01 insignificant 9.9010e-01 1.2219e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.0678297 2.2472e-01 lowCoverage 1.0000000 lowCoverage chr14 99936750 99937750 46163 WDR25 ENSG00000176473 0.9302915 198 9 0.5797537 339 9 0.446673 164 10 0.7616275 266 9 0.6172161 93 7 0.629394 309 9 0.5205988 93 8 0.6593965 195 5 0.7179839 112 8 0.5726891 143 9 0.773812 354 10 0.7865967 83 7 0.7155385 159 8 0.8216931 120 8 0.7417107 150 9 0.2083333 32 3 0.5491654 547 2 0.7786773 263 9 0.808332 291 9 0.659994 210 7 0.446293 120 9 0.612349 114 8 0.705846 150 9 0.4645008 98 8 0.7301587 85 7 0.8465627 388 10 0.508131 161 8 0.442657 72 6 0.833727 207 8 0.8333820 329 10 0.8367745 319 10 0.797430 270 9 0.9088202 178 8 0.7842233 213 8 0.8359788 420 7 0.411592 81 7 0.5569264 139 10 0.4843418 375 9 0.546214 220 9 0.7602647 197 9 0.7356736 180 9 0.5829427 151 8 0.617851 181 9 0.912268 0.6401310 0.5984064 0.9027684 0.7998862 0.814257 0.672511 0.6993979 0.7131802 0.7423613 0.837332 0.730626 0.6987459 0.829486 0.7980049 0.3781612 0.5468483 0.8277439 0.877474 0.8364312 0.688234 0.7107697 0.898179 0.6245749 0.8441472 0.9128076 0.671059 0.550091 0.891766 0.8473414 0.8188723 0.863933 0.9052908 0.9544211 0.8740619 0.4488073 0.7219236 0.6074054 0.633019 0.7755915 0.78045368 0.7421889 0.6892745 4 0.819219 0.824038 -0.00537421 8 0.690657 0.679175 0.01148136 5.0119e-01 0.38541125 insignificant 1.000000 1.000000 insignificant 0.84754809 0.0655438 insignificant 1.00000 1 insignificant -0.00751041 0.9015530 insignificant 1 insignificant 0.819219 0.8364154 0.0289146 8 0.690657 0.5850948 0.1055620 1.3774e-02 9.4117e-01 weaklyHypermeth 1.5056e-01 1.0000e+00 insignificant 8.4529e-01 1.2001e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00032684 9.9724e-01 insignificant 1.0000e+00 insignificant 0.819286 0.7545748 0.0458540 9 0.686092 0.592583 0.0935085 9.5509e-03 9.5408e-01 weaklyHypermeth 2.8942e-01 1.0000e+00 insignificant 1.8167e-01 8.4331e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0153846 7.8651e-01 insignificant 1.0000000 insignificant 0.824038 0.8364154 0.0318819 8 0.679175 0.5850948 0.09408062 5.8498e-02 7.3872e-01 insignificant 5.0598e-01 1.0000e+00 insignificant 7.3641e-01 1.9539e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0078373 9.3737e-01 insignificant 1.0000e+00 insignificant 0.824014 0.7545748 0.04913474 8 0.667317 0.592583 0.0747337 6.5708e-03 8.6030e-01 weaklyHypermeth 1.9911e-01 1.0000e+00 insignificant 2.9289e-02 9.5757e-01 weaklyHypermeth 8.8756e-01 1.0000e+00 insignificant 0.02289504 7.2687e-01 insignificant 1.000000 insignificant 0.8359486 0.7545748 0.00067238 8 0.5531790 0.592583 -0.03940436 5.1079e-01 3.4459e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.3603e-01 9.3120e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.0150578 8.7709e-01 insignificant 1.0000000 insignificant chr14 100092450 100093450 46181 WDR25 ENSG00000176473 0.6474322 167 6 0.4431747 107 6 0.390924 100 9 0.4865600 158 6 0.5811966 66 3 0.665992 218 8 0.6631944 70 3 0.6308923 83 8 0.5441520 70 7 0.7111111 44 2 0.835943 184 8 0.5115741 62 5 0.8405556 76 4 0.6972222 35 2 0.6269841 47 2 0.8750000 10 1 0.3916667 20 2 0.7047222 275 6 0.485632 142 3 0.720779 137 6 0.541196 85 6 0.507407 73 6 0.553439 66 7 0.5860344 59 6 0.7816007 93 5 0.9094203 126 3 0.735450 89 6 0.581770 43 3 0.691975 143 4 0.8213435 132 3 0.5800160 158 3 0.730835 144 8 0.0822210 188 9 0.0786722 232 9 0.1326225 263 6 0.045482 108 6 0.2917827 81 3 0.1228362 271 9 0.689154 140 6 0.5344413 194 9 0.6989050 152 6 0.4348786 323 8 0.374187 112 6 0.764162 0.6301538 0.4344104 0.6448417 0.7454212 0.802163 0.762505 0.7641640 0.4566886 0.7076389 0.751496 0.567460 0.7420536 0.627008 0.6983640 0.7436137 0.6519408 0.6230324 0.711628 0.8256228 0.751957 0.6433532 0.657242 0.4627457 0.7971155 0.7376086 0.670777 0.650072 0.657011 0.8377905 0.6614697 0.790799 0.0259708 0.0976380 0.1762999 0.1265422 0.2825613 0.0780189 0.736605 0.5959069 0.59122498 0.5986164 0.4987014 2 0.700966 0.713460 -0.01049163 3 0.631751 0.646912 -0.01516097 6.6918e-01 0.19556980 lowCoverage 1.000000 1.000000 lowCoverage 0.96594769 0.1363043 lowCoverage 1.00000 1 lowCoverage -0.04563869 0.3591644 lowCoverage 1 lowCoverage 0.700966 0.1513561 0.5640320 6 0.631751 0.1292926 0.5024580 1.5355e-32 1.0000e+00 hypermethylated 2.5591e-30 1.0000e+00 hypermethylated 1.7644e-13 1.0000e+00 hypermethylated 4.4110e-11 1.0000e+00 hypermethylated 0.49713252 6.3510e-08 lowCoverage 6.3510e-06 lowCoverage 0.700966 0.5971770 0.0822147 6 0.631751 0.533229 0.0985215 2.2444e-02 9.8510e-01 weaklyHypermeth 5.7549e-01 1.0000e+00 insignificant 2.9429e-01 9.4929e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0764223 3.3448e-01 lowCoverage 1.0000000 lowCoverage 0.713460 0.1513561 0.5695480 3 0.646912 0.1292926 0.51761900 6.0974e-25 1.0000e+00 lowCoverage 7.6218e-23 1.0000e+00 lowCoverage 9.4891e-14 1.0000e+00 lowCoverage 2.3723e-11 1.0000e+00 lowCoverage 0.5427712 4.3690e-08 hypermethylated 6.2414e-06 hypermethylated 0.713460 0.5971770 0.09340469 3 0.646912 0.533229 0.1136825 1.7828e-02 9.9803e-01 lowCoverage 4.4569e-01 1.0000e+00 lowCoverage 2.3486e-02 9.9947e-01 lowCoverage 7.8287e-01 1.0000e+00 lowCoverage 0.12206098 1.5067e-01 insignificant 1.000000 insignificant 0.1513561 0.5971770 -0.45998859 6 0.1292926 0.533229 -0.40393651 1.0000e+00 1.0194e-17 hypomethylated 1.0000e+00 2.5486e-15 hypomethylated 1.0000e+00 4.1862e-09 hypomethylated 1.0000000 1.0465e-06 hypomethylated -0.4207102 1.1402e-03 weaklyHypometh 0.1163663 insignificant chr14 100158650 100159650 46182 BEGAIN ENSG00000183092 0.9467419 175 7 0.8772311 92 6 0.885306 136 7 0.9392737 114 4 0.9431012 88 7 0.920632 307 7 0.8785089 140 7 0.9112708 102 4 0.8551050 114 7 0.9182008 71 6 0.905207 226 7 0.8245088 81 6 0.8651927 90 5 0.8541667 22 2 0.8990333 115 7 0.9791667 69 2 0.8530159 67 5 0.7019140 152 3 0.885142 85 3 0.896841 268 7 0.965201 69 4 0.683983 70 2 0.881565 114 6 0.8350131 90 7 0.9444444 29 2 0.8829034 149 7 0.834921 98 5 0.927211 56 7 0.966422 78 3 0.8741362 152 7 0.8733339 115 7 0.912418 338 7 0.6784909 103 7 0.7777778 93 3 0.5000000 8 1 0.933333 30 2 0.8169385 121 7 0.7453485 120 6 0.884584 176 4 0.9014655 206 6 0.9032880 148 3 0.9100688 158 3 0.911448 159 3 0.911854 0.8652070 0.8782722 0.9294371 0.9287416 0.913362 0.892680 0.9139782 0.7827770 0.9170156 0.894005 0.852872 0.9206295 0.945569 0.9029251 0.9248702 0.8385369 0.8146204 0.964506 0.8674908 0.953460 0.8140307 0.839397 0.7979931 0.9450702 0.8634812 0.927435 0.937997 0.967707 0.8687008 0.9179775 0.913486 0.7684198 0.8394216 0.8318797 0.8931744 0.7742856 0.9115435 0.888252 0.9357555 0.91540009 0.9180833 0.8884718 2 0.879475 0.873343 0.00154912 7 0.897425 0.889185 0.00823927 3.9150e-01 0.84721552 insignificant 1.000000 1.000000 insignificant 0.59560535 0.4400471 insignificant 1.00000 1 insignificant 0.00518196 0.8419427 insignificant 1 insignificant 0.879475 0.7914894 0.0735201 3 0.897425 0.7806042 0.1168205 4.8979e-06 9.9997e-01 lowCoverage 9.9957e-05 1.0000e+00 lowCoverage 3.3818e-02 9.7734e-01 lowCoverage 4.9414e-01 1.0000e+00 lowCoverage 0.14499648 5.8548e-02 lowCoverage 8.4852e-01 lowCoverage 0.879475 0.8441558 0.0306712 3 0.897425 0.890323 0.0071016 3.5242e-03 1.1069e-02 lowCoverage 1.4097e-01 5.5346e-01 lowCoverage 4.2611e-01 4.7027e-03 lowCoverage 1.0000e+00 0.3617432 lowCoverage -0.0151930 2.8134e-01 lowCoverage 1.0000000 lowCoverage 0.873343 0.7914894 0.0736606 3 0.889185 0.7806042 0.10858122 6.1752e-04 9.9989e-01 lowCoverage 9.2167e-03 1.0000e+00 lowCoverage 3.7542e-02 9.9536e-01 lowCoverage 5.0055e-01 1.0000e+00 lowCoverage 0.1398145 6.6839e-02 lowCoverage 9.7964e-01 lowCoverage 0.873343 0.8441558 0.04226557 3 0.889185 0.890323 -0.0011377 4.4244e-02 1.9777e-03 lowCoverage 9.4136e-01 3.7444e-01 lowCoverage 5.6131e-01 1.3139e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.02037492 3.8609e-01 lowCoverage 1.000000 lowCoverage 0.7914894 0.8441558 -0.02253752 3 0.7806042 0.890323 -0.10971890 7.2531e-01 1.4491e-03 lowCoverage 1.0000e+00 2.8414e-02 lowCoverage 9.0249e-01 1.2360e-02 lowCoverage 1.0000000 2.6298e-01 lowCoverage -0.1601894 4.3002e-02 lowCoverage 0.7209762 lowCoverage chr14 100210550 100211550 46186 C14orf70 ENSG00000196273 0.8125447 261 5 0.6877674 271 5 0.669515 193 5 0.5953850 245 5 0.8042298 139 5 0.763309 483 5 0.5431291 215 5 0.8247450 252 5 0.8438927 261 5 0.8305282 215 5 0.807315 227 5 0.8440967 108 5 0.6604683 253 5 0.7595866 156 5 0.7277535 202 5 0.7907563 120 5 0.7597403 49 3 0.7402058 391 5 0.792428 280 5 0.615915 355 5 0.859855 105 5 0.382259 100 3 0.642214 192 5 0.8529676 127 5 0.7258297 63 4 0.7957193 392 5 0.591361 191 5 0.804055 204 5 0.817747 337 5 0.8473814 328 5 0.7228791 304 5 0.875772 376 5 0.8348205 292 5 0.6252428 174 5 0.8010753 337 5 0.875000 22 3 0.7635053 184 5 0.5431368 354 5 0.221631 418 5 0.4255671 315 5 0.4136044 212 5 0.3088404 332 5 0.602478 252 5 0.765184 0.7265923 0.6160759 0.6766621 0.7881143 0.844666 0.693845 0.8017772 0.7627768 0.7726087 0.760303 0.774696 0.5141703 0.706598 0.6704038 0.6798377 0.7664943 0.5731537 0.756345 0.6908500 0.846348 0.3450281 0.745776 0.8066978 0.6668106 0.7589929 0.823805 0.801854 0.742892 0.8051974 0.7084201 0.872710 0.8337138 0.6235631 0.7084811 0.8168149 0.7524532 0.4417000 0.181558 0.4302957 0.40481691 0.2766513 0.3670298 5 0.727837 0.775488 -0.04489930 5 0.711467 0.728990 -0.01752330 9.7234e-01 0.04961216 weaklyHypometh 1.000000 1.000000 insignificant 0.88781394 0.0508609 insignificant 1.00000 1 insignificant 0.00049548 0.9915688 lowCoverage 1 lowCoverage 0.728326 0.6896552 0.0446832 5 0.753760 0.7106976 0.0430623 1.1732e-01 9.2604e-01 insignificant 9.8586e-01 1.0000e+00 insignificant 3.6620e-01 5.2387e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00320209 9.5634e-01 lowCoverage 1.0000e+00 lowCoverage 0.727837 0.3405370 0.3923179 5 0.711467 0.333310 0.3781569 1.5607e-23 1.0000e+00 hypermethylated 7.8036e-21 1.0000e+00 hypermethylated 2.0877e-13 1.0000e+00 hypermethylated 2.0877e-10 1.0000000 hypermethylated 0.3492414 3.8846e-03 lowCoverage 0.1438744 lowCoverage 0.776180 0.6896552 0.0910851 5 0.794788 0.7106976 0.08409023 1.7818e-02 9.7284e-01 weaklyHypermeth 1.9580e-01 1.0000e+00 insignificant 9.5710e-02 5.8370e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0027066 9.6861e-01 lowCoverage 1.0000e+00 lowCoverage 0.775285 0.3409686 0.43232174 5 0.696277 0.428551 0.2677259 1.9349e-18 9.9972e-01 hypermethylated 8.1436e-16 1.0000e+00 hypermethylated 3.6835e-08 9.9998e-01 hypermethylated 7.8686e-06 1.0000e+00 hypermethylated 0.34874593 2.0710e-03 lowCoverage 0.188272 lowCoverage 0.6896552 0.3418803 0.32959842 5 0.7106976 0.399972 0.31072606 1.6451e-09 9.9897e-01 hypermethylated 5.4835e-07 1.0000e+00 hypermethylated 7.4684e-06 9.7746e-01 hypermethylated 0.0026542 1.0000e+00 hypermethylated 0.3460393 2.9066e-03 lowCoverage 0.1614777 lowCoverage chr14 100225950 100226950 46189 C14orf70 ENSG00000196273 0.7122540 301 9 0.6553793 166 8 0.500614 94 5 0.8911997 216 8 0.7436357 84 8 0.691051 336 8 0.6550665 96 8 0.6825841 140 8 0.6658249 93 9 0.6845609 112 8 0.718797 272 9 0.6611111 57 4 0.7075985 150 9 0.7205556 32 5 0.6463669 138 8 0.7666667 37 4 0.6944444 27 1 0.7785210 271 8 0.745997 158 9 0.753178 304 8 0.781229 119 5 0.681112 104 8 0.674799 186 8 0.6777940 128 5 0.8918866 86 8 0.7678679 210 8 0.756939 116 8 0.888269 63 5 0.692264 177 8 0.7655745 223 8 0.7334656 224 8 0.722775 397 9 0.7207127 147 8 0.6198950 108 8 0.7066320 233 9 0.708333 61 4 0.6430250 125 8 0.7440484 228 8 0.740016 276 8 0.7323422 266 8 0.8125459 194 8 0.7479493 260 8 0.771732 285 8 0.851961 0.7941579 0.7545060 0.9111366 0.7804333 0.824403 0.831749 0.8217154 0.8643438 0.8468662 0.840312 0.785603 0.8229006 0.825378 0.8354448 0.8047874 0.8414397 0.9025256 0.875431 0.8689122 0.840004 0.8081839 0.876572 0.8728611 0.9150585 0.8650505 0.802310 0.874433 0.785161 0.8542222 0.8751312 0.867513 0.8573748 0.8123331 0.8535952 0.8845655 0.7880541 0.8504586 0.907514 0.8881369 0.88303586 0.8870197 0.8968951 5 0.811933 0.824397 -0.00529024 8 0.721365 0.724717 -0.00335127 6.8713e-01 0.32549931 insignificant 1.000000 1.000000 insignificant 0.83468535 0.2379179 insignificant 1.00000 1 insignificant -0.04906094 0.0833479 insignificant 1 insignificant 0.811933 0.7937916 0.0093379 8 0.721365 0.6987305 0.0226349 8.4222e-02 6.6046e-01 insignificant 7.4533e-01 1.0000e+00 insignificant 3.4299e-01 5.6506e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01332926 6.1318e-01 insignificant 1.0000e+00 insignificant 0.811933 0.8961749 -0.0404306 8 0.721365 0.737224 -0.0158589 9.1857e-01 1.9869e-02 weaklyHypometh 1.0000e+00 7.0960e-01 insignificant 9.4107e-01 2.2768e-02 weaklyHypometh 1.0000e+00 0.8850312 insignificant -0.0571467 1.9846e-02 weaklyHypometh 0.4961501 insignificant 0.824397 0.7937916 0.0130193 8 0.724717 0.6987305 0.02598622 7.2350e-02 7.6363e-01 insignificant 5.9794e-01 1.0000e+00 insignificant 8.8643e-02 8.4359e-01 insignificant 9.6351e-01 1.0000e+00 insignificant 0.0623902 4.9277e-02 weaklyHypermeth 8.2128e-01 insignificant 0.824397 0.8961749 -0.03412212 8 0.724717 0.737224 -0.0125077 8.9858e-01 4.3005e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 8.5781e-01 1.3745e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00808575 7.5911e-01 insignificant 1.000000 insignificant 0.7937916 0.8961749 -0.05127131 8 0.6987305 0.737224 -0.03849390 9.7736e-01 2.9126e-03 weaklyHypometh 1.0000e+00 5.2957e-02 weaklyHypometh 9.5282e-01 2.8322e-02 weaklyHypometh 1.0000000 4.4677e-01 insignificant -0.0704760 1.8663e-02 weaklyHypometh 0.4147440 insignificant chr14 100231850 100232850 46190 C14orf70 ENSG00000196273 0.8760821 101 6 0.8524141 122 6 0.900163 114 6 0.9523810 75 3 0.9170900 96 4 0.952181 215 7 0.9234694 107 3 0.9673175 126 6 0.8141540 85 5 0.9247126 74 2 0.950987 215 6 0.9217687 50 2 0.8765306 87 2 0.8703704 60 2 0.9478320 99 3 1.0000000 22 2 1.0000000 1 0 0.9315789 54 3 0.989411 131 5 0.924993 176 6 0.840415 75 5 0.922222 36 4 0.897959 107 6 0.7713675 46 3 0.9121212 26 2 0.9373826 235 6 0.992674 118 5 0.798611 26 2 0.976096 128 3 0.9287947 244 6 0.9463920 277 5 0.934295 200 7 0.8438998 118 6 0.9458333 144 5 1.0000000 95 5 1.000000 7 0 0.8064565 134 6 0.8644950 203 6 0.928516 119 3 0.8335486 138 7 0.9432540 49 2 0.9473684 76 2 0.982413 85 5 0.858622 0.8077505 0.8613359 0.9851852 0.9647091 0.921302 0.889971 0.9492540 0.8704557 0.9349571 0.891449 0.959373 0.8661187 0.915197 0.8620467 0.9910228 NA 0.9064327 0.976611 0.8635029 0.806763 0.9417989 0.853968 0.4957774 0.8068783 0.9331686 0.977615 0.930776 0.947290 0.9179215 0.9021197 0.930045 0.8977539 0.9368800 1.0000000 0.9875916 0.8704917 0.7731048 0.905305 0.8411010 0.85018896 0.9482561 0.9457822 2 0.907869 0.909091 0.00064348 6 0.922219 0.805146 0.11707312 7.9966e-01 0.71686684 insignificant 1.000000 1.000000 insignificant 0.44681830 0.8108483 insignificant 1.00000 1 insignificant 0.01981095 0.3894750 lowCoverage 1 lowCoverage 0.907777 0.8757143 0.0297865 5 0.911107 0.8449049 0.0662023 6.7800e-03 7.8200e-01 weaklyHypermeth 7.8837e-02 1.0000e+00 weaklyHypermeth 3.4437e-01 6.7172e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01455774 6.9752e-01 lowCoverage 1.0000e+00 lowCoverage 0.907777 0.8929336 0.0123390 3 0.911107 0.901548 0.0095590 3.9982e-01 8.8157e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.4710e-01 7.8625e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage -0.0023483 9.3440e-01 lowCoverage 1.0000000 lowCoverage 0.909690 0.8757143 0.0337927 5 0.920166 0.8449049 0.07526163 2.9398e-03 8.7291e-01 weaklyHypermeth 3.7213e-02 1.0000e+00 weaklyHypermeth 3.9286e-01 4.6803e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0052532 8.9660e-01 lowCoverage 1.0000e+00 lowCoverage 0.909690 0.8929336 0.01246455 3 0.920166 0.901548 0.0186183 2.1583e-01 9.0281e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 6.5460e-01 7.7102e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.02215928 5.0255e-01 lowCoverage 1.000000 lowCoverage 0.8757143 0.8929336 -0.01496676 2 0.8449049 0.901548 -0.05664334 7.6696e-01 2.7523e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.0756e-01 4.5018e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage -0.0169061 6.9823e-01 lowCoverage 1.0000000 lowCoverage chr14 101661950 101662950 46218 HSP90AA1 ENSG00000080824 0.5678127 292 9 0.5407218 169 9 0.569753 126 9 0.6431486 198 9 0.6802436 101 9 0.655574 261 9 0.5559875 135 9 0.7079670 117 8 0.6274331 106 9 0.5915874 102 9 0.635639 324 9 0.5656085 68 8 0.7192890 194 9 0.7083333 26 4 0.6507805 163 9 0.5237879 56 5 0.5448413 54 5 0.5478461 213 9 0.647752 183 9 0.768849 242 9 0.599281 74 7 0.697209 92 7 0.580317 176 9 0.7591015 87 6 0.6480880 67 4 0.7206317 161 9 0.747932 167 8 0.591667 39 5 0.656851 108 8 0.7747226 185 9 0.6557467 190 9 0.620690 395 9 0.6573333 102 6 0.5251526 104 9 0.7417385 119 9 0.587382 69 9 0.6242021 142 7 0.6097932 156 9 0.680942 279 9 0.6540634 330 9 0.6410261 243 9 0.7325953 330 9 0.681187 226 9 0.547692 0.5126411 0.5406017 0.6328074 0.6449790 0.713444 0.533060 0.7205421 0.6231930 0.6136217 0.636711 0.566601 0.6906041 0.688196 0.6366060 0.6033836 0.6229061 0.5637060 0.624133 0.6906629 0.620957 0.6265787 0.556285 0.7198488 0.6095640 0.7365957 0.712225 0.689017 0.599155 0.7790351 0.6942136 0.598559 0.6744494 0.5533380 0.7792189 0.5409772 0.6833228 0.6235464 0.669576 0.6476736 0.62784125 0.6340286 0.6712445 6 0.646006 0.672414 -0.04158020 9 0.575901 0.670822 -0.09492084 9.9899e-01 0.05185180 insignificant 1.000000 1.000000 insignificant 0.99945521 0.0099420 weaklyHypometh 1.00000 1 insignificant -0.04837204 0.0664181 insignificant 1 insignificant 0.646100 0.6835260 -0.0320691 9 0.591081 0.5854710 0.0056105 3.4114e-02 6.6763e-03 weaklyHypometh 3.2490e-01 3.6765e-01 insignificant 1.6028e-01 1.6176e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00161913 9.6267e-01 insignificant 1.0000e+00 insignificant 0.646513 0.7164179 -0.0292694 9 0.605529 0.722452 -0.1169236 9.4516e-01 2.3127e-02 weaklyHypometh 1.0000e+00 7.4603e-01 insignificant 8.9150e-01 2.4731e-02 weaklyHypometh 1.0000e+00 0.8909571 insignificant -0.0553150 2.7010e-02 weaklyHypometh 0.5641173 insignificant 0.672424 0.6835260 0.0108672 9 0.654986 0.5854710 0.06951552 9.2466e-03 5.3935e-01 weaklyHypermeth 1.1008e-01 1.0000e+00 insignificant 1.0330e-02 7.8907e-01 weaklyHypermeth 1.8782e-01 1.0000e+00 insignificant 0.0467529 2.1873e-01 insignificant 1.0000e+00 insignificant 0.672800 0.7166193 0.01262454 9 0.712489 0.745581 -0.0330924 7.7125e-01 7.1837e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.1113e-01 9.0086e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00694295 7.8637e-01 insignificant 1.000000 insignificant 0.6845152 0.7160142 -0.00154757 9 0.6505233 0.660775 -0.01025162 2.4484e-01 3.7123e-02 weaklyHypometh 1.0000e+00 3.9917e-01 insignificant 5.5858e-01 1.0082e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.0536959 1.5043e-01 insignificant 1.0000000 insignificant chr14 102075050 102076050 46224 ANKRD9 ENSG00000156381 0.9160320 427 10 0.8446239 434 12 0.795511 592 13 0.9368538 445 10 0.9454021 197 7 0.871761 471 12 0.8913836 227 10 0.9476607 331 10 0.8960866 400 10 0.9375950 331 10 0.862724 445 10 0.9104295 197 10 0.8583137 372 12 0.8736287 232 7 0.8895871 371 10 0.8692754 123 8 0.9418803 35 3 0.9415326 575 10 0.821880 393 10 0.851057 359 12 0.886981 196 10 0.874293 247 12 0.916927 374 13 0.8361956 202 10 0.9534435 220 10 0.9255946 589 12 0.859959 341 10 0.918223 291 9 0.883205 388 10 0.9164972 597 12 0.9377613 576 13 0.909233 511 12 0.8761073 385 10 0.6042070 220 10 0.9931373 437 12 0.786342 91 7 0.8236780 329 12 0.8722931 419 13 0.919701 332 10 0.9348353 349 10 0.9003523 324 10 0.8856133 268 10 0.944668 365 12 0.880816 0.8188847 0.7729837 0.9183096 0.9078680 0.885692 0.873370 0.9295726 0.8521602 0.8925785 0.868846 0.842445 0.8371612 0.898092 0.8742662 0.9502014 0.9074433 0.9105285 0.804308 0.8400633 0.955422 0.8698970 0.942315 0.8846046 0.9328694 0.9195963 0.830510 0.937711 0.900655 0.8970878 0.9041438 0.896445 0.8070451 0.6668188 0.9918905 0.8290386 0.8138781 0.9588939 0.888948 0.9312740 0.89917111 0.8489621 0.9474232 7 0.877645 0.910856 -0.03105712 12 0.899658 0.856619 0.04303899 9.9972e-01 0.01257433 weaklyHypometh 1.000000 0.734416 insignificant 0.92432745 0.0514738 insignificant 1.00000 1 insignificant -0.01136522 0.4214519 insignificant 1 insignificant 0.876799 0.8729399 0.0073669 12 0.821062 0.8153896 0.0056726 3.7641e-01 6.1847e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.8169e-01 5.0009e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.06420017 2.8158e-01 insignificant 1.0000e+00 insignificant 0.877680 0.9047619 -0.0286564 10 0.899658 0.928921 -0.0292630 9.8832e-01 1.0544e-02 weaklyHypometh 1.0000e+00 5.5346e-01 insignificant 9.9307e-01 7.3988e-02 insignificant 1.0000e+00 1.0000000 insignificant -0.0268730 9.2807e-02 insignificant 1.0000000 insignificant 0.911239 0.8738691 0.0369382 12 0.911483 0.8781118 0.03337162 6.6154e-02 8.6373e-01 insignificant 5.6063e-01 1.0000e+00 insignificant 3.6934e-01 7.4744e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0755654 2.1412e-01 insignificant 1.0000e+00 insignificant 0.911258 0.9047037 0.00398230 10 0.917806 0.923844 -0.0060379 8.2480e-01 4.4740e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.4645e-01 4.5829e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01550775 3.1225e-01 insignificant 1.000000 insignificant 0.8738691 0.9046455 -0.03800427 10 0.8781118 0.917986 -0.03987393 7.7125e-01 1.4753e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.7868e-01 3.8133e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.0910731 1.4682e-01 insignificant 1.0000000 insignificant chr14 102082350 102083350 46225 ANKRD9 ENSG00000156381 0.7206871 135 7 0.6165223 128 7 0.664404 106 7 0.6725821 95 4 0.6270408 62 7 0.641312 212 6 0.4582640 71 6 0.7451877 167 7 0.5971552 84 6 0.6930937 78 7 0.761633 265 7 0.6256184 61 5 0.6749749 159 7 0.7555556 37 4 0.6418831 65 6 0.6394558 35 4 0.6785714 23 2 0.6812169 103 6 0.627449 170 7 0.579298 155 7 0.683053 77 7 0.811429 38 4 0.653741 72 5 0.6614583 64 7 0.4011905 24 3 0.7131336 212 7 0.679762 73 6 0.781046 57 4 0.767895 166 7 0.7874392 221 7 0.7487612 167 7 0.722482 224 7 0.5352874 193 7 0.7759217 118 7 0.5229802 194 7 0.535714 22 1 0.6231339 90 5 0.4374466 164 7 0.668238 61 4 0.7554997 120 7 0.7503593 84 4 0.6116883 44 5 0.710099 100 4 0.686136 0.6146240 0.6051106 0.7391758 0.6316360 0.719722 0.449009 0.7543851 0.5739106 0.7933166 0.740926 0.615844 0.6927087 0.709025 0.6050597 0.6673618 0.9217935 0.6964750 0.629987 0.7182090 0.716960 0.7771449 0.646565 0.6547445 0.5652698 0.6708786 0.698601 0.739469 0.739613 0.7826437 0.7081890 0.747432 0.5183327 0.7167118 0.5669439 0.5450122 0.5690675 0.4788582 0.631988 0.7217085 0.72326681 0.5764875 0.6849486 2 0.696970 0.731183 -0.03613738 7 0.642668 0.762660 -0.11999187 9.7840e-01 0.01542274 weaklyHypometh 1.000000 0.734416 insignificant 0.95662927 0.0804333 insignificant 1.00000 1 insignificant -0.04585392 0.2045917 insignificant 1 insignificant 0.697959 0.5672215 0.1422086 7 0.686858 0.5631400 0.1237182 2.1126e-06 3.7757e-01 weaklyHypermeth 4.4949e-05 1.0000e+00 weaklyHypermeth 5.6944e-03 5.2984e-01 weaklyHypermeth 1.0951e-01 1.0000e+00 insignificant 0.08334796 1.4462e-01 insignificant 1.0000e+00 insignificant 0.697959 0.6797066 0.0017693 6 0.686858 0.720116 -0.0332575 5.3140e-01 8.1195e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 5.0290e-01 7.6396e-02 insignificant 1.0000e+00 1.0000000 insignificant -0.0440816 1.9904e-01 lowCoverage 1.0000000 lowCoverage 0.730797 0.5672215 0.1933382 7 0.728754 0.5631400 0.16561369 2.3089e-07 9.7777e-01 weaklyHypermeth 6.4136e-06 1.0000e+00 weaklyHypermeth 1.1261e-03 9.8050e-01 weaklyHypermeth 2.9634e-02 1.0000e+00 weaklyHypermeth 0.1292019 4.7342e-02 weaklyHypermeth 8.1624e-01 insignificant 0.730797 0.6797066 0.02549751 6 0.728754 0.720116 0.0086379 1.4563e-01 6.7738e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.7764e-01 4.1291e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00177233 9.6631e-01 lowCoverage 1.000000 lowCoverage 0.5672215 0.6797066 -0.14470979 6 0.5631400 0.720116 -0.15697576 9.7848e-01 1.5512e-03 weaklyHypometh 1.0000e+00 2.9831e-02 weaklyHypometh 9.8122e-01 1.7190e-02 weaklyHypometh 1.0000000 3.0157e-01 insignificant -0.1274296 4.8618e-02 lowCoverage 0.7618738 lowCoverage chr14 102362950 102363950 46235 ENSG00000211232 0.9667850 304 6 0.9848084 141 6 0.923766 131 6 0.8489509 303 8 0.9821429 50 4 0.949695 332 8 0.9406936 119 6 0.9487786 136 6 0.8957282 129 4 0.9601326 91 4 0.931343 276 6 0.9018748 52 4 0.9638889 84 6 0.9119048 43 4 0.9403775 108 6 0.9363636 38 3 0.7035024 68 3 0.9372149 293 6 0.976379 182 4 0.967591 269 6 0.924587 85 6 1.000000 44 3 0.922900 188 6 0.9086241 64 4 1.0000000 57 6 0.9221907 247 8 0.877949 163 6 0.839318 58 4 0.968506 171 6 0.9507748 180 6 0.9639583 189 8 0.951027 261 8 0.8995492 117 6 0.9108982 178 6 0.9296875 399 8 0.888889 63 3 0.7960833 121 6 0.9234274 228 8 0.960863 240 8 0.9687830 263 6 0.9548641 245 6 0.9771663 222 6 0.953196 245 8 0.917349 0.9764256 0.9235078 0.9541419 0.9828113 0.917319 0.963649 0.9185345 0.9071582 0.9347806 0.951427 0.898208 0.9273619 0.912153 0.9468567 0.8884784 0.9186515 0.9144245 0.951326 0.9322109 0.891540 1.0000000 0.970153 0.8525599 1.0000000 0.8708527 0.825432 0.865605 0.959296 0.9377605 0.9294029 0.944474 0.8114691 0.7784519 0.9123217 0.6969697 0.9545339 0.8527502 0.934733 0.9896629 0.96073070 0.9580646 0.9421549 4 0.930772 0.923257 0.00763073 6 0.863493 0.903580 -0.04008725 3.3924e-01 0.64737000 insignificant 1.000000 1.000000 insignificant 0.70672156 0.6418265 insignificant 1.00000 1 insignificant -0.00722354 0.7135948 insignificant 1 insignificant 0.931045 0.9032550 0.0631131 6 0.903881 0.8890947 0.0147860 2.3183e-01 6.6075e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.7043e-01 8.5768e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03717368 1.5753e-01 insignificant 1.0000e+00 insignificant 0.931045 0.9489712 -0.0171044 6 0.903881 0.961565 -0.0576840 8.3509e-01 3.6725e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.0183e-01 5.6787e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0343783 2.8335e-02 weaklyHypometh 0.5690582 insignificant 0.923754 0.9032550 0.0534655 6 0.948422 0.8890947 0.05932738 5.5231e-01 5.7975e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.4996e-01 8.5159e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0443972 9.7364e-02 insignificant 1.0000e+00 insignificant 0.923212 0.9489712 -0.02616660 6 0.892866 0.961565 -0.0686982 5.8166e-01 2.9306e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.1685e-01 3.4136e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02715475 8.0270e-02 insignificant 1.000000 insignificant 0.9039855 0.9489292 -0.06326063 6 0.9377315 0.956760 -0.01902877 4.5910e-01 3.6756e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.3923e-01 5.0674e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.0715520 1.5027e-02 weaklyHypometh 0.3764611 insignificant chr14 102546650 102547650 46237 AMN ENSG00000166126 0.7973258 145 5 0.9380952 34 5 0.649629 68 7 0.9827998 127 7 1.0000000 23 1 1.000000 112 5 0.8142857 39 5 0.8560606 62 5 0.9642857 38 5 0.9848485 58 5 0.963799 101 5 1.0000000 16 1 1.0000000 7 0 0.8333333 6 0 0.7500000 44 5 1.0000000 31 5 0.0000000 1 0 0.5800080 197 7 0.698052 61 5 0.901842 143 7 1.000000 20 1 0.960958 51 4 0.667857 32 4 0.5000000 4 0 0.8660421 189 7 0.9214286 72 5 0.694444 32 1 1.000000 14 0 0.969231 69 5 0.9283333 111 5 0.8097527 72 5 0.887967 133 7 0.7500000 27 1 0.7870370 92 5 NA 0 0 0.933333 98 5 0.6551948 56 5 0.7344010 110 7 0.919649 98 5 0.9710407 138 5 0.9750000 81 7 0.7523958 87 5 0.963812 135 7 0.912083 0.8875661 0.6651404 0.9855072 1.0000000 1.000000 0.784392 0.8935185 0.9236111 0.9696970 0.934091 1.000000 1.0000000 1.000000 0.9236111 1.0000000 NA 0.7065527 0.702441 0.9689394 0.973189 0.9016563 0.738095 NA 0.8650178 0.9166667 0.777778 1.000000 1.000000 0.9486111 0.9325397 0.927890 1.0000000 0.9814815 NA 1.0000000 0.8388889 0.8976070 0.956713 0.9629211 1.00000000 0.9507900 0.9724026 0 0.884881 0.889862 -0.00185173 5 0.797697 0.891100 -0.09340338 7.6028e-01 0.37734822 insignificant 1.000000 1.000000 insignificant 0.48186335 0.8306359 insignificant 1.00000 1 insignificant -0.01478297 0.8322853 lowCoverage 1 lowCoverage 0.884881 0.8825065 -0.0022016 6 0.797697 0.7371298 0.0605672 2.5683e-01 6.7034e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.1265e-01 9.8497e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.06372498 3.7453e-01 lowCoverage 1.0000e+00 lowCoverage 0.883703 0.9536178 -0.0683115 6 0.767927 0.812031 -0.0441037 9.9276e-01 5.4243e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4844e-01 4.3991e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0806613 2.4797e-01 lowCoverage 1.0000000 lowCoverage 0.889862 0.8825065 0.0042229 5 0.891100 0.7371298 0.15397054 4.7073e-01 7.0996e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.5464e-01 9.8004e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0785080 2.4486e-01 lowCoverage 1.0000e+00 lowCoverage 0.889862 0.9553903 -0.06680565 5 0.891100 0.902257 -0.0111563 9.9297e-01 4.2354e-03 weaklyHypometh 1.0000e+00 4.0444e-01 insignificant 9.9286e-01 8.5919e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.06587829 3.0517e-01 lowCoverage 1.000000 lowCoverage 0.8825065 0.9553903 -0.06862578 7 0.7371298 0.902257 -0.16512686 9.9846e-01 9.1231e-03 weaklyHypometh 1.0000e+00 1.3617e-01 insignificant 9.9978e-01 2.8593e-02 weaklyHypometh 1.0000000 4.4677e-01 insignificant -0.1443862 4.9013e-02 lowCoverage 0.7618738 lowCoverage chr14 102690750 102691750 46242 TNFAIP2 ENSG00000185215 0.8815026 239 8 0.8574006 195 8 0.753689 166 8 0.8257368 212 7 0.7367424 50 6 0.854054 263 10 0.7710084 46 4 0.8140026 67 5 0.7536797 40 4 0.8963938 50 4 0.807043 134 6 0.8194444 23 1 0.6972222 114 6 0.8160714 33 3 0.6622896 65 5 0.8333333 7 0 0.2333333 16 2 0.7907209 234 8 0.600263 106 4 0.841334 169 9 0.823125 81 5 0.650242 72 6 0.765353 179 9 0.8611111 53 5 0.7540924 184 5 0.8933496 148 9 0.603181 75 4 0.767857 21 2 0.780130 126 5 0.8804125 210 9 0.8041106 234 9 0.908320 269 9 0.5851852 223 8 0.2574440 124 4 0.5044643 68 4 0.173611 61 4 0.2902407 83 6 0.6366084 203 8 0.754007 193 7 0.7711723 228 8 0.6927638 178 7 0.7580041 194 9 0.789854 154 7 0.855663 0.7542272 0.5512545 0.7581285 0.6070381 0.839254 0.763441 0.7418255 0.7953079 0.8138213 0.798901 0.588710 0.6406810 0.714200 0.5171065 0.4890079 0.4094501 0.5361078 0.466052 0.6378470 0.829212 0.4262428 0.636908 0.8566308 0.6431228 0.7855607 0.685323 0.827957 0.777245 0.7619296 0.6538658 0.826569 0.0806452 0.1154745 0.2832181 0.1059268 0.0992556 0.2367351 0.378630 0.4471150 0.31105991 0.3726377 0.5276590 1 0.763122 0.775288 -0.02461697 7 0.795510 0.766113 0.02939720 9.2771e-01 0.25149206 insignificant 1.000000 1.000000 insignificant 0.79440936 0.4816943 insignificant 1.00000 1 insignificant -0.02867717 0.5013370 insignificant 1 insignificant 0.763122 0.3110236 0.4254696 6 0.795510 0.5336958 0.2618142 1.7247e-18 9.9962e-01 hypermethylated 8.2130e-17 1.0000e+00 hypermethylated 1.8558e-07 9.9993e-01 hypermethylated 1.0310e-05 1.0000e+00 hypermethylated 0.35433761 4.4307e-03 weaklyHypermeth 1.1975e-01 insignificant 0.763359 0.6092925 0.1599016 7 0.825061 0.772012 0.0530486 3.9726e-04 5.8886e-02 weaklyHypermeth 1.9863e-02 1.0000e+00 weaklyHypermeth 1.4501e-02 2.7452e-01 weaklyHypermeth 5.1791e-01 1.0000000 insignificant 0.0091030 8.0396e-01 insignificant 1.0000000 insignificant 0.775288 0.3110236 0.4550042 7 0.766113 0.5336958 0.23241697 3.1165e-19 1.0000e+00 hypermethylated 1.9478e-17 1.0000e+00 hypermethylated 5.3149e-07 1.0000e+00 hypermethylated 3.3218e-05 1.0000e+00 hypermethylated 0.3830148 3.3061e-03 weaklyHypermeth 9.7239e-02 weaklyHypermeth 0.775758 0.6092925 0.20548527 8 0.842724 0.772012 0.0707117 9.2837e-06 1.5046e-01 hypermethylated 5.8023e-04 1.0000e+00 hypermethylated 4.1861e-03 1.9165e-01 weaklyHypermeth 2.2032e-01 1.0000e+00 insignificant 0.03778016 2.4968e-01 insignificant 1.000000 insignificant 0.3114323 0.6092925 -0.25351238 8 0.5870654 0.772012 -0.18494699 1.0000e+00 1.7625e-12 hypomethylated 1.0000e+00 2.2031e-10 hypomethylated 1.0000e+00 1.4788e-06 hypomethylated 1.0000000 2.4647e-04 hypomethylated -0.3452346 6.3299e-03 weaklyHypometh 0.2669655 insignificant chr14 103091150 103092150 46257 TRMT61A ENSG00000166166 0.7296929 405 15 0.6369408 159 11 0.665069 171 11 0.7041636 274 15 0.7609619 102 11 0.751436 410 15 0.7527864 123 10 0.6790925 152 10 0.7943723 101 10 0.7422078 118 10 0.755806 284 11 0.8313492 79 6 0.8302747 164 11 0.8231293 51 2 0.8250098 138 11 0.7475580 98 6 0.8444473 937 10 0.7021527 265 14 0.815420 231 11 0.697284 376 15 0.859091 58 7 0.787704 103 10 0.722444 276 15 0.6996947 71 9 0.7871901 55 5 0.7905341 410 15 0.863911 93 5 0.449587 66 5 0.778102 175 11 0.7261508 324 15 0.8040185 333 15 0.730838 451 15 0.6410965 166 10 0.6963499 145 11 0.7694093 219 11 0.790152 65 5 0.6870986 93 9 0.7225162 391 15 0.768412 410 15 0.7977047 396 15 0.7431089 318 15 0.7296316 323 15 0.750733 382 15 0.830949 0.6700347 0.6879566 0.8194345 0.7538829 0.814983 0.800692 0.7651895 0.8562724 0.7571153 0.793910 0.831513 0.8560910 0.813844 0.8687509 0.7795568 0.8869275 0.8096107 0.843792 0.8310381 0.861380 0.7758593 0.770101 0.7622517 0.7749538 0.8187019 0.885716 0.625253 0.782708 0.8304504 0.8045905 0.768620 0.7033298 0.7062697 0.7898578 0.7841995 0.7175165 0.7727931 0.867273 0.8445011 0.84937362 0.8230520 0.8621976 4 0.785683 0.771049 0.01810519 15 0.690374 0.715720 -0.02534561 1.3075e-01 0.99405857 insignificant 1.000000 1.000000 insignificant 0.27299712 0.8197231 insignificant 1.00000 1 insignificant 0.00451905 0.8959184 insignificant 1 insignificant 0.785853 0.7451344 0.0490502 11 0.730984 0.7190038 0.0119806 2.1735e-03 8.9220e-01 weaklyHypermeth 2.7658e-02 1.0000e+00 weaklyHypermeth 4.5649e-02 9.9805e-01 weaklyHypermeth 6.0064e-01 1.0000e+00 insignificant 0.03668737 1.9730e-01 insignificant 1.0000e+00 insignificant 0.785853 0.8190268 -0.0366365 15 0.730984 0.764700 -0.0337154 9.9992e-01 4.6027e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9994e-01 8.4959e-02 insignificant 1.0000e+00 1.0000000 insignificant -0.0034604 8.5058e-01 insignificant 1.0000000 insignificant 0.770859 0.7451344 0.0337177 11 0.698997 0.7190038 -0.02000635 3.2316e-02 3.6022e-01 weaklyHypermeth 3.0777e-01 1.0000e+00 insignificant 1.9670e-01 8.0547e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0321683 4.1432e-01 insignificant 1.0000e+00 insignificant 0.770859 0.8190268 -0.05714617 15 0.698997 0.764700 -0.0657024 9.9997e-01 3.5434e-04 weaklyHypometh 1.0000e+00 1.1811e-01 insignificant 9.9967e-01 1.2374e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.00797941 8.1381e-01 insignificant 1.000000 insignificant 0.7451344 0.8190268 -0.09092739 11 0.7190038 0.764700 -0.04569605 9.5552e-01 6.7308e-05 weaklyHypometh 1.0000e+00 1.8191e-03 weaklyHypometh 9.9959e-01 9.2781e-04 weaklyHypometh 1.0000000 4.0713e-02 weaklyHypometh -0.0401477 1.5560e-01 insignificant 1.0000000 insignificant chr14 103265350 103266350 46260 ZFYVE21 ENSG00000100711 0.9439057 182 5 0.8540678 240 5 0.886307 178 5 0.9288524 248 5 0.9421545 106 5 0.913621 261 5 0.8749316 168 5 0.8944323 164 5 0.8988506 150 5 0.9248288 134 5 0.840814 212 5 0.9263576 106 5 0.8992478 149 5 NA 0 0 0.8462302 119 5 0.8072358 99 5 0.8619240 119 5 0.9299819 221 4 0.897941 106 5 0.900278 193 5 0.856490 107 5 0.893937 59 4 0.925558 194 5 0.8182234 85 5 0.8980392 43 3 0.9238312 210 5 0.792646 96 5 0.881026 79 5 0.916650 147 5 0.8818032 207 5 0.8825054 211 5 0.949521 247 5 0.8931896 188 5 0.8514606 123 5 1.0000000 207 5 0.865455 33 3 0.9393002 111 5 0.9254146 182 5 0.902144 262 5 0.8963481 272 5 0.9607314 183 4 0.9393422 222 4 0.916546 245 4 0.924628 0.8536853 0.8628414 0.9093217 0.9305205 0.879595 0.870586 0.8919594 0.8635926 0.8974568 0.842823 0.937588 0.8879874 NA 0.8474987 0.8063310 0.8503255 0.8973776 0.923299 0.9185773 0.846473 0.8485572 0.907112 0.7874317 0.8877531 0.9146626 0.806861 0.883296 0.910758 0.8938225 0.8769131 0.942857 0.9095391 0.7955684 1.0000000 0.8810730 0.9292494 0.9225988 0.876596 0.8789501 0.94077351 0.9067076 0.8931470 4 0.886529 0.893769 -0.00862699 5 0.894614 0.894308 0.00030585 4.8014e-01 0.23249834 insignificant 1.000000 1.000000 insignificant 0.28205162 0.4975116 insignificant 1.00000 1 insignificant 0.00824187 0.6036100 lowCoverage 1 lowCoverage 0.886529 0.9170616 -0.0309197 5 0.894614 0.9210922 -0.0264781 8.2878e-01 1.5808e-02 weaklyHypometh 1.0000e+00 6.7519e-01 insignificant 9.9460e-01 3.6648e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.01920885 4.4902e-01 lowCoverage 1.0000e+00 lowCoverage 0.886529 0.8961149 -0.0149385 4 0.894614 0.920381 -0.0257671 9.4979e-01 4.3316e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.2623e-01 5.9734e-02 lowCoverage 1.0000e+00 1.0000000 lowCoverage -0.0297612 7.5958e-02 lowCoverage 1.0000000 lowCoverage 0.893769 0.9170616 -0.0229679 5 0.894308 0.9210922 -0.02678395 7.5793e-01 7.5987e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8619e-01 4.8620e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0274507 3.1615e-01 lowCoverage 1.0000e+00 lowCoverage 0.893769 0.8961149 -0.00651312 4 0.894308 0.920381 -0.0260729 8.5981e-01 7.3288e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.9088e-01 1.5923e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.03800304 5.1940e-02 lowCoverage 1.000000 lowCoverage 0.9170616 0.8961149 0.01995480 4 0.9210922 0.920381 0.00071100 3.6357e-01 5.1321e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 4.6265e-01 6.7553e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage -0.0105523 6.8799e-01 lowCoverage 1.0000000 lowCoverage chr14 103812450 103813450 46262 KIF26A ENSG00000066735 0.7915462 984 14 0.6595587 373 13 0.646709 260 14 0.8598758 1010 14 0.8638678 184 14 0.893880 879 14 0.8295498 220 14 0.8863695 277 14 0.8184831 197 12 0.9487120 235 12 0.894089 610 14 0.8866297 99 9 0.8693123 368 12 0.7331356 135 9 0.8823359 302 12 1.0000000 76 6 0.9166667 10 0 0.6401302 1333 14 0.916668 459 14 0.921665 693 14 0.866506 169 14 0.862075 234 11 0.779927 411 14 0.8423903 150 9 0.9176228 286 14 0.9270068 444 14 0.765904 334 13 0.936275 72 7 0.851216 422 14 0.9338973 203 12 0.8989243 384 14 0.941639 675 14 0.2002549 577 14 0.0589673 532 14 0.0791536 187 6 0.676725 78 9 0.2753210 415 14 0.3381030 681 14 0.902997 791 14 0.8491523 828 14 0.8635866 998 14 0.8767210 825 12 0.797082 701 14 0.877938 0.6510138 0.6790545 0.8915824 0.8531276 0.896798 0.874980 0.9095174 0.8034318 0.9347075 0.887449 0.894011 0.9186441 0.775179 0.9047730 0.9603622 0.8846615 0.7720615 0.902575 0.9188575 0.896120 0.8329501 0.904651 0.9162549 0.9131587 0.9153679 0.822835 0.992668 0.925252 0.9200447 0.8890610 0.931998 0.2177079 0.0205921 0.1388796 0.5707861 0.2005320 0.3175355 0.905317 0.8037263 0.86302315 0.8875994 0.7945181 8 0.857997 0.899233 -0.03577076 14 0.797814 0.788131 0.00968345 9.9827e-01 0.01521238 weaklyHypometh 1.000000 0.734416 insignificant 0.99958526 0.0187398 weaklyHypometh 1.00000 1 insignificant -0.03398923 0.2414502 insignificant 1 insignificant 0.858409 0.2118267 0.6505598 14 0.835041 0.2175061 0.6175348 8.5761e-113 1.0000e+00 hypermethylated 8.5761e-110 1.0000e+00 hypermethylated 1.3714e-28 1.0000e+00 hypermethylated 1.3714e-25 1.0000e+00 hypermethylated 0.57153841 1.2190e-03 weaklyHypermeth 5.0794e-02 weaklyHypermeth 0.858409 0.8394883 0.0155076 14 0.835041 0.872293 -0.0372520 2.1031e-01 5.8162e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.4784e-02 8.4182e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0149485 6.0794e-01 insignificant 1.0000000 insignificant 0.899974 0.2121457 0.6869754 14 0.893315 0.2635352 0.62977966 7.8571e-89 1.0000e+00 hypermethylated 7.8571e-86 1.0000e+00 hypermethylated 8.6146e-24 1.0000e+00 hypermethylated 8.6146e-21 1.0000e+00 hypermethylated 0.6055276 1.0322e-03 weaklyHypermeth 4.1663e-02 weaklyHypermeth 0.899947 0.8394883 0.05256658 14 0.886647 0.872293 0.0143541 1.4257e-03 9.9864e-01 weaklyHypermeth 5.6546e-02 1.0000e+00 weaklyHypermeth 5.8220e-04 9.9990e-01 weaklyHypermeth 3.4247e-02 1.0000e+00 weaklyHypermeth 0.01904072 4.5594e-01 insignificant 1.000000 insignificant 0.2118267 0.8394883 -0.63511398 14 0.2175061 0.872293 -0.65478675 1.0000e+00 5.3983e-42 hypomethylated 1.0000e+00 5.3983e-39 hypomethylated 1.0000e+00 1.0949e-16 hypomethylated 1.0000000 1.0949e-13 hypomethylated -0.5864869 1.2013e-03 weaklyHypometh 0.1163663 insignificant chr14 104113850 104114850 46264 ENSG00000213159 0.7684188 308 8 0.7915949 159 6 0.785714 154 6 0.7990238 266 8 0.8484548 93 6 0.887373 344 8 0.6764009 172 6 0.6558005 215 6 0.6761560 132 6 0.6392354 128 6 0.731369 201 6 0.7471140 107 6 0.5830163 151 6 0.6647059 22 2 0.5897786 186 6 0.8059211 87 6 0.5180556 67 5 0.7392106 328 6 0.684709 128 8 0.754188 240 8 0.854171 136 6 0.670072 141 6 0.688167 174 6 0.7136111 100 6 0.7642157 91 6 0.8624655 238 8 0.702209 163 6 0.643557 101 6 0.671065 151 6 0.7996429 100 8 0.7926109 228 8 0.795505 360 8 0.3429589 187 6 0.2327953 136 6 0.3053356 341 6 0.366961 158 8 0.2541246 103 7 0.3421733 289 8 0.740449 348 8 0.6159451 295 8 0.6107325 261 8 0.5504847 296 6 0.694209 307 8 0.822347 0.8172874 0.7991057 0.8206945 0.8420035 0.831947 0.750715 0.7811811 0.6856466 0.8357281 0.813089 0.760979 0.7767041 0.762903 0.7913176 0.9224986 0.6042697 0.7155747 0.659709 0.8297933 0.857496 0.6817827 0.799857 0.6975122 0.8435036 0.8494110 0.682653 0.824314 0.677225 0.9054530 0.7265500 0.873381 0.3036258 0.2553436 0.3627341 0.4499564 0.2797042 0.2855346 0.791940 0.7831496 0.76959349 0.7420667 0.7176006 6 0.788417 0.799294 -0.00766973 6 0.679397 0.692461 -0.01306354 9.5535e-01 0.54788659 insignificant 1.000000 1.000000 insignificant 0.95525805 0.7744971 insignificant 1.00000 1 insignificant -0.02912906 0.3413386 insignificant 1 insignificant 0.788296 0.2858320 0.4837660 6 0.652680 0.2906305 0.3620498 6.7326e-45 9.9994e-01 hypermethylated 2.2442e-42 1.0000e+00 hypermethylated 6.0463e-12 1.0000e+00 hypermethylated 1.2093e-09 1.0000e+00 hypermethylated 0.40992059 8.2176e-10 hypermethylated 1.1739e-07 hypermethylated 0.788384 0.7485070 0.0321633 6 0.643833 0.558658 0.0851747 7.3478e-03 8.6789e-01 weaklyHypermeth 2.3703e-01 1.0000e+00 insignificant 1.9551e-02 9.3204e-01 weaklyHypermeth 6.3068e-01 1.0000000 insignificant 0.0749478 9.6975e-02 insignificant 1.0000000 insignificant 0.799193 0.2858320 0.4857307 6 0.666832 0.2906305 0.37620198 2.4932e-32 1.0000e+00 hypermethylated 8.3107e-30 1.0000e+00 hypermethylated 4.6593e-10 1.0000e+00 hypermethylated 7.3486e-08 1.0000e+00 hypermethylated 0.4390497 1.4670e-09 hypermethylated 3.6676e-07 hypermethylated 0.799495 0.7485070 0.04647395 6 0.681999 0.558658 0.1233407 6.4834e-03 9.7923e-01 weaklyHypermeth 1.9911e-01 1.0000e+00 insignificant 3.4498e-02 9.8809e-01 weaklyHypermeth 9.5827e-01 1.0000e+00 insignificant 0.10407686 3.2649e-02 weaklyHypermeth 0.960278 insignificant 0.2852432 0.7485070 -0.43891869 8 0.2261423 0.558658 -0.33251598 1.0000e+00 9.0294e-18 hypomethylated 1.0000e+00 2.5486e-15 hypomethylated 1.0000e+00 3.2768e-06 hypomethylated 1.0000000 4.0960e-04 hypomethylated -0.3349728 6.2335e-05 hypomethylated 0.0124670 hypomethylated chr14 104214850 104215850 46265 ENSG00000203486 0.1023826 996 24 0.0856199 889 25 0.102243 1011 24 0.0637904 966 19 0.0587779 767 26 0.102802 1097 24 0.1217542 1312 26 0.0964468 683 24 0.0905950 1140 20 0.1200610 1074 24 0.101863 831 24 0.0917725 1009 24 0.0682543 928 20 0.3333333 106 1 0.0318553 962 24 0.0289026 903 20 0.0330452 1039 20 0.0546814 874 18 0.017505 639 24 0.077763 932 22 0.049222 435 24 0.141500 627 17 0.115149 922 24 0.0162674 489 22 0.1436320 730 22 0.0883035 1188 25 0.063394 603 23 0.103987 342 19 0.120502 765 24 0.0996988 629 24 0.1100908 1121 24 0.069798 1228 24 0.0079600 796 26 0.0204519 696 26 0.2008929 252 10 0.012083 696 24 0.0783111 357 25 0.0245898 985 26 0.057294 1280 22 0.0685660 1018 24 0.0405634 791 19 0.0384225 1043 23 0.058210 1106 19 0.023259 0.0225370 0.0196232 0.0079250 0.0291813 0.041422 0.025064 0.0156142 0.0136583 0.0227432 0.041464 0.047144 0.0070579 0.024760 0.0193872 0.0225580 0.0139252 0.0156656 0.016197 0.0169104 0.016985 0.0106324 0.044208 0.0100066 0.0059951 0.0161579 0.035672 0.019384 0.028003 0.0174991 0.0175940 0.048032 0.0059684 0.0057947 0.0036766 0.0021699 0.0048631 0.0125566 0.013987 0.0181234 0.00057715 0.0129356 0.0344347 14 0.043727 0.043066 -0.00251719 24 0.090183 0.078671 0.01151245 2.4270e-01 0.78291230 insignificant 1.000000 1.000000 insignificant 0.12958922 0.9828614 insignificant 1.00000 1 insignificant -0.00428969 0.8157792 insignificant 1 insignificant 0.043739 0.0227393 0.0347393 24 0.098141 0.0631742 0.0349664 1.2463e-08 1.0000e+00 weaklyHypermeth 3.5608e-07 1.0000e+00 weaklyHypermeth 3.8373e-07 1.0000e+00 weaklyHypermeth 2.0197e-05 1.0000e+00 weaklyHypermeth 0.03179089 3.7699e-01 insignificant 1.0000e+00 insignificant 0.043637 0.0143184 0.0059743 21 0.097473 0.053772 0.0437011 4.7174e-03 9.9932e-01 weaklyHypermeth 1.7472e-01 1.0000e+00 insignificant 1.6283e-02 9.9997e-01 weaklyHypermeth 5.4276e-01 1.0000000 insignificant 0.0365612 2.8893e-02 weaklyHypermeth 0.5690582 insignificant 0.042999 0.0227393 0.0321782 24 0.075808 0.0631742 0.01263427 4.9442e-04 1.0000e+00 weaklyHypermeth 7.7253e-03 1.0000e+00 weaklyHypermeth 2.4376e-03 1.0000e+00 weaklyHypermeth 5.6689e-02 1.0000e+00 weaklyHypermeth 0.0360806 3.0653e-01 insignificant 1.0000e+00 insignificant 0.043166 0.0143184 0.00625244 21 0.090963 0.053772 0.0371912 9.0449e-02 9.9899e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.8036e-01 9.7785e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.04085089 4.8966e-03 weaklyHypermeth 0.376659 insignificant 0.0228056 0.0143349 -0.00906905 21 0.0715974 0.057357 0.01424072 9.9765e-01 6.3864e-03 weaklyHypometh 1.0000e+00 9.9787e-02 weaklyHypometh 9.9845e-01 1.4505e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.0047703 8.8358e-01 insignificant 1.0000000 insignificant chr14 104237550 104238550 46266 INF2 ENSG00000203485 0.6701592 185 9 0.3253405 210 9 0.442133 209 9 0.3291959 136 4 0.4081633 85 5 0.559477 163 10 0.7791240 125 6 0.5949927 80 6 0.4475458 125 6 0.4795810 145 6 0.383759 249 8 0.5338881 89 6 0.4758620 137 6 0.9666667 32 1 0.6176966 159 6 0.7959150 72 6 0.4466667 22 2 0.8392138 178 7 0.907851 116 6 0.328278 245 11 0.685744 107 5 0.622449 60 1 0.787568 136 10 0.7452201 61 5 0.4481481 99 1 0.4327808 208 11 0.588988 78 6 0.569298 67 5 0.599573 90 6 0.5900794 70 8 0.1471631 282 9 0.438718 264 11 0.7214098 143 9 0.9836091 173 5 0.8583302 435 13 0.658791 79 5 0.7958739 100 6 0.6608797 237 12 0.711789 144 10 0.6929057 216 9 0.5817332 114 8 0.8383838 155 3 0.768483 121 7 0.724653 0.4310826 0.5956080 0.4872293 0.5673803 0.614763 0.724465 0.7303304 0.6131216 0.5488738 0.530721 0.646563 0.7067835 0.707379 0.7066592 0.7572477 0.6489860 0.7998428 0.904871 0.4803395 0.628411 0.7413947 0.777211 0.7292336 0.4857925 0.4694145 0.566521 0.723551 0.660813 0.6974145 0.3487021 0.388036 0.7681612 0.9599573 0.9948875 0.8299250 0.9129545 0.7001130 0.775205 0.8229750 0.61227654 0.8248125 0.8283828 1 0.568841 0.490145 0.08024736 7 0.490186 0.449062 0.04112409 3.9462e-02 0.99340166 weaklyHypermeth 1.000000 1.000000 insignificant 0.39756989 0.8938417 insignificant 1.00000 1 insignificant 0.01193139 0.8590801 insignificant 1 insignificant 0.569047 0.8156089 -0.2716226 7 0.527893 0.7489681 -0.2210752 9.8024e-01 1.3246e-14 hypomethylated 1.0000e+00 4.4153e-12 hypomethylated 9.9776e-01 8.2626e-07 hypomethylated 1.0000e+00 2.7542e-04 hypomethylated -0.21324018 7.8809e-03 weaklyHypometh 1.7911e-01 insignificant 0.569047 0.7840000 -0.1551437 5 0.527893 0.729904 -0.2020109 9.9999e-01 5.8915e-09 weaklyHypometh 1.0000e+00 2.9457e-06 weaklyHypometh 9.9993e-01 5.8042e-05 weaklyHypometh 1.0000e+00 0.0290210 weaklyHypometh -0.1520834 2.7078e-02 weaklyHypometh 0.5641173 insignificant 0.490789 0.8156089 -0.3547635 9 0.483605 0.7489681 -0.26536272 9.9967e-01 2.6392e-13 hypomethylated 1.0000e+00 1.3196e-10 hypomethylated 9.9968e-01 3.1396e-06 hypomethylated 1.0000e+00 1.0465e-03 hypomethylated -0.2251716 7.5279e-03 weaklyHypometh 1.8820e-01 insignificant 0.490789 0.7840000 -0.24042513 5 0.483605 0.729904 -0.2462983 1.0000e+00 2.2259e-08 hypomethylated 1.0000e+00 1.1130e-05 hypomethylated 9.9993e-01 1.4882e-03 weaklyHypometh 1.0000e+00 3.8384e-01 insignificant -0.16401480 2.5600e-02 weaklyHypometh 0.920812 insignificant 0.8156089 0.7840000 0.07617341 7 0.7489681 0.729904 0.01906437 1.0469e-02 6.1614e-01 weaklyHypermeth 6.1580e-01 1.0000e+00 insignificant 2.9432e-02 9.0469e-01 weaklyHypermeth 1.0000000 1.0000e+00 insignificant 0.0611568 3.8514e-01 insignificant 1.0000000 insignificant chr14 104335950 104336950 46267 AKT1 ENSG00000142208 0.6080973 529 12 0.5034156 692 15 0.614317 379 14 0.5436420 589 14 0.6106033 281 14 0.651973 745 14 0.4994782 416 15 0.5562569 472 16 0.5995118 510 13 0.6716269 408 13 0.626101 655 16 0.5940959 164 12 0.3303071 502 13 0.6590732 275 12 0.4928620 299 11 0.6305312 173 8 0.7738095 70 4 0.5114136 751 9 0.561071 433 12 0.514334 533 14 0.571835 205 12 0.324937 257 13 0.541690 297 13 0.5552962 256 15 0.5910940 271 9 0.5548896 775 15 0.306382 316 12 0.479817 211 13 0.708329 494 11 0.5384741 440 15 0.5651820 705 16 0.674907 600 14 0.4259134 642 16 0.5332888 276 11 0.3595432 459 10 0.728333 95 6 0.4532511 480 16 0.6107470 550 15 0.644617 467 9 0.6392162 503 9 0.6236160 526 13 0.6523836 612 9 0.537144 469 12 0.610934 0.5549088 0.6218638 0.5592200 0.6286769 0.712264 0.519294 0.5854256 0.5545847 0.6578295 0.667798 0.585390 0.4093635 0.612502 0.4962120 0.6418843 0.6756011 0.5787866 0.601106 0.5530028 0.628842 0.4168048 0.577680 0.6155201 0.5434307 0.5840236 0.389264 0.532302 0.684598 0.5244479 0.5940782 0.684352 0.4607069 0.5179337 0.4495307 0.7375124 0.5626449 0.5829457 0.578450 0.6067946 0.53136716 0.5883350 0.5869090 8 0.600834 0.594695 0.00230105 13 0.589322 0.571000 0.01832144 1.9207e-01 0.68809991 insignificant 1.000000 1.000000 insignificant 0.12725548 0.9716571 insignificant 1.00000 1 insignificant 0.04322325 0.2928119 insignificant 1 insignificant 0.600834 0.4928058 0.0841018 14 0.589322 0.4571645 0.1321570 6.8115e-07 9.7145e-01 weaklyHypermeth 1.5815e-05 1.0000e+00 weaklyHypermeth 9.6536e-03 8.4748e-01 weaklyHypermeth 1.7444e-01 1.0000e+00 insignificant 0.05911318 3.5030e-01 insignificant 1.0000e+00 insignificant 0.600789 0.6708075 -0.0155105 11 0.563654 0.616108 -0.0524539 6.1915e-01 2.9420e-05 weaklyHypometh 1.0000e+00 7.3549e-03 weaklyHypometh 4.9558e-01 1.7895e-02 weaklyHypometh 1.0000e+00 0.7456087 insignificant -0.0417694 1.7927e-01 insignificant 1.0000000 insignificant 0.594695 0.4928058 0.0804858 15 0.571000 0.4571645 0.11383558 9.8329e-05 7.5015e-01 weaklyHypermeth 1.8910e-03 1.0000e+00 weaklyHypermeth 3.7082e-02 5.5503e-01 weaklyHypermeth 5.0055e-01 1.0000e+00 insignificant 0.0158899 8.1191e-01 insignificant 1.0000e+00 insignificant 0.594527 0.6708075 -0.01275650 11 0.544188 0.616108 -0.0719204 7.8120e-01 7.8375e-04 weaklyHypometh 1.0000e+00 1.9594e-01 insignificant 9.0569e-01 7.9770e-03 weaklyHypometh 1.0000e+00 8.8633e-01 insignificant -0.08499264 5.2021e-02 insignificant 1.000000 insignificant 0.4932000 0.6708075 -0.11478908 11 0.4857373 0.616108 -0.13037075 9.9133e-01 1.3145e-05 weaklyHypometh 1.0000e+00 4.3815e-04 weaklyHypometh 8.5475e-01 9.7160e-02 insignificant 1.0000000 1.0000e+00 insignificant -0.1008826 1.3466e-01 insignificant 1.0000000 insignificant chr14 104736050 104737050 46270 NUDT14 ENSG00000183828 0.8379990 399 14 0.7912266 283 15 0.612702 380 15 0.9144416 454 14 0.8274071 248 15 0.829330 560 15 0.8997866 354 14 0.8387160 255 15 0.8044349 340 15 0.8228917 401 14 0.778756 419 15 0.8706327 310 15 0.7514005 422 15 0.9389418 182 9 0.8533922 401 15 0.6225535 176 12 0.8703879 175 13 0.7292656 549 14 0.859558 243 14 0.862161 504 15 0.733119 181 12 0.834990 206 13 0.748765 290 15 0.7654134 225 14 0.7753834 158 11 0.9240184 357 15 0.815208 230 13 0.851288 218 14 0.826658 312 15 0.8894380 206 15 0.8264511 367 15 0.923017 642 15 0.4520288 391 15 0.6454719 318 14 0.5000000 29 2 0.835234 144 12 0.6048934 233 15 0.6978355 366 14 0.927184 396 13 0.8511085 571 14 0.8265294 362 14 0.7728190 567 14 0.923092 397 11 0.897848 0.8130657 0.6537534 0.8951273 0.8726953 0.850395 0.894419 0.8837691 0.8452812 0.8936466 0.829111 0.850552 0.7862937 0.907846 0.8482561 0.6595271 0.8746704 0.7361493 0.864597 0.8634856 0.812001 0.7707848 0.831493 0.8994582 0.7843086 0.9227086 0.780101 0.922183 0.890178 0.8718375 0.8790296 0.920339 0.4814435 0.6699518 NA 0.8592936 0.7120444 0.6960052 0.920793 0.8532317 0.81751724 0.7800213 0.9085275 12 0.831892 0.871863 -0.04134081 14 0.806168 0.826667 -0.02049888 9.9986e-01 0.00211682 weaklyHypometh 1.000000 0.331914 insignificant 0.99899852 0.0153352 weaklyHypometh 1.00000 1 insignificant -0.01034647 0.6985897 insignificant 1 insignificant 0.831892 0.6466216 0.1810788 14 0.806168 0.5910466 0.2151214 5.2638e-19 9.9999e-01 weaklyHypermeth 2.7704e-17 1.0000e+00 weaklyHypermeth 4.0571e-06 9.9940e-01 weaklyHypermeth 1.6905e-04 1.0000e+00 weaklyHypermeth 0.19322192 1.6981e-02 weaklyHypermeth 3.4654e-01 insignificant 0.833784 0.8547754 -0.0153707 14 0.834292 0.850135 -0.0158432 9.3257e-01 3.1558e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.8298e-01 1.4131e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0443473 2.4197e-01 insignificant 1.0000000 insignificant 0.870873 0.6461850 0.2245324 14 0.791852 0.5582107 0.23364133 6.3879e-19 1.0000e+00 hypermethylated 3.7576e-17 1.0000e+00 hypermethylated 1.5067e-06 1.0000e+00 hypermethylated 8.3704e-05 1.0000e+00 hypermethylated 0.2035684 1.3754e-02 weaklyHypermeth 3.1260e-01 insignificant 0.874554 0.8547754 0.02785711 14 0.871977 0.850135 0.0218417 1.9125e-01 9.5463e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.1378e-01 9.2686e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03400085 3.5822e-01 insignificant 1.000000 insignificant 0.6487772 0.8547754 -0.19405351 14 0.6476306 0.850135 -0.20250449 1.0000e+00 1.1203e-07 weaklyHypometh 1.0000e+00 7.0021e-06 weaklyHypometh 9.9999e-01 2.9407e-04 weaklyHypometh 1.0000000 2.2621e-02 weaklyHypometh -0.2375692 6.6741e-03 weaklyHypometh 0.2669655 insignificant chr14 105115950 105116950 46272 ENSG00000219311 0.7986267 559 20 0.7814630 414 16 0.745084 400 17 0.8641194 698 19 0.7922483 344 18 0.919564 653 18 0.7213536 278 16 0.8244227 369 17 0.8249684 660 16 0.8520679 821 16 0.784123 508 17 0.8390196 280 13 0.8836710 786 17 0.9079926 370 15 0.8031154 490 17 0.7320382 363 11 0.6983014 123 9 0.8448295 746 14 0.805475 658 16 0.900865 517 17 0.936877 245 17 0.765993 265 10 0.914291 351 17 0.8946604 225 13 0.9087869 236 13 0.8437802 537 18 0.881694 359 17 0.840265 209 10 0.835367 646 15 0.8652056 230 14 0.8705095 503 18 0.894179 714 17 0.7752790 423 16 0.5579313 562 16 0.7169921 464 12 0.793787 216 13 0.6521137 377 17 0.6898338 636 20 0.719638 604 19 0.8699059 758 20 0.8458870 403 15 0.8387874 902 19 0.920127 547 19 0.842367 0.8983153 0.7572929 0.9214395 0.8728022 0.895383 0.829131 0.9321988 0.8864856 0.9294033 0.872465 0.851771 0.8544282 0.889624 0.9033903 0.8531392 0.8699951 0.8521528 0.861608 0.8880959 0.908260 0.8287766 0.917829 0.8917101 0.9226328 0.8906404 0.893827 0.899952 0.872732 0.8440250 0.9032058 0.906132 0.7648045 0.6363507 0.7776998 0.8176753 0.7795270 0.8468596 0.873860 0.9056415 0.87721063 0.8892379 0.9198514 9 0.875400 0.886701 -0.01111182 17 0.839594 0.839813 -0.00021858 8.9369e-01 0.41873679 insignificant 1.000000 1.000000 insignificant 0.98722113 0.2822523 insignificant 1.00000 1 insignificant -0.05480004 0.0079472 weaklyHypometh 1 insignificant 0.873990 0.7397311 0.1260855 17 0.790475 0.5885249 0.2019501 1.0419e-18 1.0000e+00 weaklyHypermeth 5.2095e-17 1.0000e+00 weaklyHypermeth 2.7146e-08 1.0000e+00 weaklyHypermeth 1.9390e-06 1.0000e+00 weaklyHypermeth 0.11851123 1.7879e-02 weaklyHypermeth 3.5757e-01 insignificant 0.877692 0.8829390 -0.0087864 15 0.877829 0.836188 0.0416410 9.7230e-01 5.3951e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.2975e-01 7.8799e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0227017 5.5216e-01 insignificant 1.0000000 insignificant 0.886650 0.7416698 0.1348317 17 0.825883 0.6652890 0.16059425 3.8157e-15 1.0000e+00 weaklyHypermeth 1.8170e-13 1.0000e+00 weaklyHypermeth 1.8670e-08 1.0000e+00 weaklyHypermeth 1.8670e-06 1.0000e+00 weaklyHypermeth 0.1733113 3.0716e-03 weaklyHypermeth 9.5987e-02 weaklyHypermeth 0.887386 0.8829223 0.00090190 15 0.878057 0.822192 0.0558652 7.8776e-01 4.2915e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.9869e-01 8.4791e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03209832 4.0576e-01 insignificant 1.000000 insignificant 0.7438887 0.8834739 -0.13626518 15 0.6760489 0.874716 -0.19866697 1.0000e+00 1.7372e-10 weaklyHypometh 1.0000e+00 1.5792e-08 weaklyHypometh 1.0000e+00 6.6750e-06 weaklyHypometh 1.0000000 7.4167e-04 weaklyHypometh -0.1412129 1.7003e-02 weaklyHypometh 0.3954123 insignificant chr14 105236350 105237350 46273 ENSG00000213140 0.8736100 408 14 0.8692222 224 13 0.666845 431 13 0.8983135 715 19 0.7703858 293 13 0.752038 345 15 0.7596743 279 13 0.8378110 245 10 0.8361458 751 15 0.9043351 715 14 0.812212 351 14 0.7874445 445 12 0.7813291 529 14 0.9403390 257 9 0.7846905 574 14 0.7586905 404 13 0.7485385 290 10 0.8289686 579 14 0.757717 304 12 0.722789 235 13 0.860759 171 14 0.853116 267 13 0.898852 243 14 0.7614194 242 14 0.9384346 267 13 0.8217811 363 14 0.793696 273 13 0.833582 232 13 0.788123 295 12 0.9231045 171 10 0.8588607 254 10 0.814741 302 14 0.7559429 255 13 0.5867336 237 13 0.8337372 404 14 0.756835 154 10 0.7709173 301 14 0.6902776 297 14 0.871423 612 18 0.8888464 436 13 0.8053020 286 16 0.9078174 1043 18 0.850839 549 15 0.928445 0.8879492 0.7822017 0.9152479 0.8939435 0.872581 0.864069 0.8994510 0.8893223 0.9196856 0.902550 0.918217 0.8785847 0.930025 0.9216839 0.8515100 0.8310037 0.8792731 0.865102 0.8201374 0.932694 0.8419931 0.939470 0.8351530 0.9286968 0.9192178 0.887463 0.890907 0.897306 0.9372898 0.8634841 0.892732 0.8302664 0.6256110 0.8416614 0.8266169 0.8421779 0.8247933 0.884980 0.9251960 0.88622502 0.9240306 0.9050884 9 0.886660 0.883728 0.00026641 13 0.761833 0.731895 0.02993790 6.4022e-01 0.90215605 insignificant 1.000000 1.000000 insignificant 0.98688887 0.6624957 insignificant 1.00000 1 insignificant -0.04098415 0.0726745 insignificant 1 insignificant 0.886765 0.7876214 0.0956558 14 0.796461 0.7003091 0.0961522 2.1211e-10 9.9996e-01 weaklyHypermeth 6.4277e-09 1.0000e+00 weaklyHypermeth 7.5118e-04 9.9819e-01 weaklyHypermeth 1.9768e-02 1.0000e+00 weaklyHypermeth 0.07214767 9.7694e-02 insignificant 1.0000e+00 insignificant 0.891210 0.9090287 -0.0184813 14 0.871407 0.882321 -0.0109147 9.3339e-01 4.5581e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 8.8294e-01 7.1647e-02 insignificant 1.0000e+00 1.0000000 insignificant -0.0602905 2.5457e-02 weaklyHypometh 0.5591393 insignificant 0.884016 0.7876214 0.0937397 13 0.765163 0.7003091 0.06485347 5.0837e-05 9.9989e-01 weaklyHypermeth 1.0375e-03 1.0000e+00 weaklyHypermeth 5.1067e-04 9.9993e-01 weaklyHypermeth 1.5020e-02 1.0000e+00 weaklyHypermeth 0.1131318 2.0120e-02 weaklyHypermeth 4.1917e-01 insignificant 0.885491 0.9087179 -0.01923147 13 0.849218 0.840306 0.0089119 9.4841e-01 1.4112e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.0127e-01 7.4489e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01930638 4.3187e-01 insignificant 1.000000 insignificant 0.7895377 0.9090287 -0.11374721 14 0.7703400 0.882321 -0.11198128 1.0000e+00 4.6900e-05 weaklyHypometh 1.0000e+00 1.3794e-03 weaklyHypometh 9.9999e-01 8.4973e-04 weaklyHypometh 1.0000000 4.0713e-02 weaklyHypometh -0.1324382 1.0531e-02 weaklyHypometh 0.3761129 insignificant chr15 20249450 20250450 46287 MIR1268 ENSG00000221641 0.9308905 89 5 0.5750157 135 6 0.683952 54 5 0.9294872 110 3 0.4841270 37 3 0.805483 116 7 0.7900000 25 3 0.6920342 102 5 0.8037698 71 5 0.9452300 87 7 0.926427 296 7 0.6972789 25 2 0.6664878 174 7 0.8595238 59 3 0.6824176 121 7 1.0000000 11 0 0.8000000 12 1 0.5961274 121 5 0.803771 137 7 0.794898 155 7 0.951299 57 5 0.516975 39 1 0.834524 58 3 0.7291667 60 5 0.9166667 19 1 0.8069725 147 7 0.895465 72 5 0.357143 13 0 0.798047 55 5 0.7331491 176 7 0.8732724 187 7 0.884936 184 7 0.6929563 107 5 0.7444037 139 7 0.8551948 166 5 0.500000 10 0 0.7378122 60 3 0.8907807 195 7 0.861678 56 1 0.8545016 96 4 0.5119048 32 2 0.7202381 43 1 0.860217 65 3 0.900298 0.6934505 0.7527530 0.9168870 0.8081597 0.828125 0.832031 0.8222233 0.7341580 0.8868543 0.870515 0.331101 0.7369542 0.842003 0.7459135 1.0000000 0.7135417 0.6175326 0.840458 0.7806920 0.949929 0.7859306 0.842448 0.7573661 0.8710938 0.8458026 0.846478 0.554688 0.852352 0.7106857 0.8924647 0.869433 0.6629915 0.6047009 0.4871483 0.7278350 0.6608173 0.8072980 0.767805 0.8171495 0.74609375 0.8313802 0.8220448 1 0.791946 0.824742 -0.03783339 5 0.806767 0.836069 -0.02930223 9.7411e-01 0.18860053 insignificant 1.000000 1.000000 insignificant 0.76540886 0.3675265 insignificant 1.00000 1 insignificant -0.00145530 0.9806402 lowCoverage 1 lowCoverage 0.791946 0.7769572 0.0289621 5 0.806767 0.8364362 -0.0296690 1.9999e-01 1.4282e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.4593e-01 6.2230e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03648810 5.8579e-01 lowCoverage 1.0000e+00 lowCoverage 0.791624 0.8321918 -0.0110091 2 0.779163 0.740586 0.0385762 2.1527e-01 5.0017e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.5800e-01 3.2221e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 0.0116381 8.8139e-01 lowCoverage 1.0000000 lowCoverage 0.824742 0.7769572 0.0677463 5 0.836069 0.8364362 -0.00036675 8.1499e-02 1.7402e-01 insignificant 6.6259e-01 1.0000e+00 insignificant 3.6811e-01 5.2992e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0379434 6.2546e-01 lowCoverage 1.0000e+00 lowCoverage 0.823917 0.8321918 0.03392463 2 0.812651 0.740586 0.0720644 1.9582e-02 7.9712e-01 lowCoverage 4.7200e-01 1.0000e+00 lowCoverage 3.0531e-01 3.5754e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.01309338 8.8072e-01 lowCoverage 1.000000 lowCoverage 0.7762963 0.8321918 -0.15122989 2 0.8130699 0.740586 0.07248356 1.2781e-01 3.6086e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.6419e-01 1.5465e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage -0.0248500 7.8552e-01 lowCoverage 1.0000000 lowCoverage chr15 26997750 26998750 46318 ENSG00000182650 0.4606079 895 25 0.4822721 981 23 0.545360 412 23 0.4739952 628 23 0.5055306 219 19 0.469287 994 24 0.2801365 548 21 0.4415497 390 21 0.4114329 276 17 0.4963862 232 19 0.462407 648 20 0.4900821 129 9 0.6644207 298 17 0.5105820 157 13 0.5457900 348 17 0.5523810 132 11 0.4952822 101 9 0.6955834 720 22 0.320711 754 19 0.519169 729 23 0.459377 231 19 0.506474 195 15 0.494269 526 23 0.4264776 290 19 0.5554754 338 20 0.6224985 1001 24 0.396855 327 21 0.481677 152 10 0.437946 609 18 0.4563193 1025 23 0.5283139 1057 24 0.421839 931 24 0.6362952 594 20 0.5764579 365 21 0.6619564 767 17 0.829955 290 11 0.5917399 327 19 0.7308960 884 24 0.635598 861 25 0.5599070 912 24 0.6796678 583 23 0.6460220 832 21 0.668778 702 23 0.500585 0.4366404 0.5494895 0.4685856 0.5069187 0.385926 0.320129 0.5305351 0.5224002 0.5709289 0.490601 0.525849 0.7141743 0.647207 0.5634082 0.5359019 0.5768249 0.6967281 0.412000 0.5229257 0.460827 0.5230778 0.499651 0.4355319 0.5918611 0.6650091 0.508485 0.515610 0.469525 0.4835334 0.4551565 0.401357 0.6962760 0.6527668 0.7950146 0.7747960 0.7540166 0.7129015 0.647635 0.6445796 0.74140239 0.6873264 0.6913682 11 0.542881 0.516911 0.00935401 23 0.482439 0.474263 0.00817678 4.1475e-01 0.95798395 insignificant 1.000000 1.000000 insignificant 0.49385117 0.9896772 insignificant 1.00000 1 insignificant 0.00885497 0.7539718 insignificant 1 insignificant 0.542836 0.6870158 -0.1362306 24 0.489407 0.6067124 -0.1173052 9.9839e-01 8.9507e-26 weaklyHypometh 1.0000e+00 8.9507e-23 weaklyHypometh 9.5338e-01 1.8734e-07 weaklyHypometh 1.0000e+00 9.3670e-05 weaklyHypometh -0.18006842 3.4144e-03 weaklyHypometh 1.0042e-01 insignificant 0.542911 0.7071979 -0.1267043 23 0.484036 0.600382 -0.1163458 1.0000e+00 3.7003e-14 weaklyHypometh 1.0000e+00 3.7003e-11 weaklyHypometh 9.9984e-01 3.9003e-06 weaklyHypometh 1.0000e+00 0.0039003 weaklyHypometh -0.1468462 2.5926e-04 weaklyHypometh 0.0288063 weaklyHypometh 0.517086 0.6873642 -0.1376638 23 0.481353 0.6295794 -0.14822663 8.7357e-01 2.1060e-27 weaklyHypometh 1.0000e+00 2.1060e-24 weaklyHypometh 8.5075e-01 7.3499e-08 weaklyHypometh 1.0000e+00 3.6749e-05 weaklyHypometh -0.1889234 2.8542e-03 weaklyHypometh 9.5141e-02 weaklyHypometh 0.517148 0.7076249 -0.14173016 22 0.499210 0.645093 -0.1458826 9.9989e-01 1.1499e-20 weaklyHypometh 1.0000e+00 1.1499e-17 weaklyHypometh 1.0000e+00 9.7526e-10 weaklyHypometh 1.0000e+00 9.7526e-07 weaklyHypometh -0.15570113 2.1461e-04 weaklyHypometh 0.030659 weaklyHypometh 0.6872479 0.7077438 0.02876218 23 0.6209408 0.660420 -0.03947894 2.3893e-03 8.8021e-01 weaklyHypermeth 1.8379e-01 1.0000e+00 insignificant 1.6118e-01 6.6962e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.0332223 4.7516e-01 insignificant 1.0000000 insignificant chr15 27019150 27020150 46320 APBA2 ENSG00000034053 0.8467206 201 5 0.7715062 303 5 0.776766 159 5 0.8914138 194 5 0.7039308 160 5 0.641743 360 5 0.8431746 198 5 0.6517368 167 5 0.6572039 220 5 0.8798701 111 5 0.831322 271 5 0.7410256 80 5 0.7376983 190 5 0.7923711 85 5 0.8744837 210 5 0.7121212 62 5 0.8411812 397 5 0.8314092 222 5 0.779518 92 5 0.820062 249 5 0.716880 69 5 0.902278 113 5 0.699465 132 5 0.7215107 98 5 0.6980311 64 5 0.8470217 306 5 0.774782 93 5 0.577878 94 5 0.878979 185 5 0.7568512 311 5 0.7991355 312 5 0.834359 306 5 0.7252274 233 5 0.6962424 105 5 0.6081633 102 3 0.652381 28 4 0.7625838 186 5 0.8278163 263 5 0.815130 213 5 0.8930176 193 5 0.8919184 161 5 0.7292390 194 5 0.853221 235 5 0.876358 0.8520879 0.8062613 0.9098625 0.8647663 0.820421 0.871461 0.8280733 0.8262129 0.9056895 0.843783 0.789508 0.8489860 0.820782 0.8645384 0.7490208 0.8896774 0.8460899 0.820996 0.8579859 0.901600 0.8817196 0.851175 0.8022047 0.8526856 0.8811394 0.792398 0.749405 0.865340 0.8095768 0.8410907 0.855645 0.6872410 0.6838715 0.6101660 0.6828636 0.7086197 0.8595488 0.844476 0.9184479 0.91828682 0.8877348 0.8916739 5 0.851692 0.848296 0.01032024 5 0.747718 0.754194 -0.00647643 3.1348e-01 0.69071335 insignificant 1.000000 1.000000 insignificant 0.44990820 0.5434939 insignificant 1.00000 1 insignificant 0.01399871 0.6633445 insignificant 1 insignificant 0.851692 0.7426390 0.0984206 5 0.747718 0.7401016 0.0076163 1.6265e-06 8.7671e-01 weaklyHypermeth 3.6144e-05 1.0000e+00 weaklyHypermeth 6.3747e-03 8.0748e-01 weaklyHypermeth 1.1805e-01 1.0000e+00 insignificant 0.06919395 9.3133e-02 lowCoverage 1.0000e+00 lowCoverage 0.851692 0.8995984 -0.0336359 5 0.747718 0.720173 0.0275451 9.4190e-01 4.4012e-03 weaklyHypometh 1.0000e+00 3.3855e-01 insignificant 9.8004e-01 1.7878e-03 weaklyHypometh 1.0000e+00 0.1807703 insignificant -0.0552421 1.5960e-01 insignificant 1.0000000 insignificant 0.848296 0.7426390 0.0893635 5 0.754194 0.7401016 0.01409269 7.6828e-04 9.5259e-01 weaklyHypermeth 1.0975e-02 1.0000e+00 weaklyHypermeth 1.4661e-02 8.7370e-01 weaklyHypermeth 2.4434e-01 1.0000e+00 insignificant 0.0551952 2.0935e-01 lowCoverage 1.0000e+00 lowCoverage 0.848296 0.8995984 -0.04427652 5 0.754194 0.720173 0.0340215 9.7563e-01 8.3576e-03 weaklyHypometh 1.0000e+00 5.2235e-01 insignificant 9.9091e-01 1.9622e-03 weaklyHypometh 1.0000e+00 3.8384e-01 insignificant -0.06924083 1.1615e-01 insignificant 1.000000 insignificant 0.7426390 0.8995984 -0.13461410 5 0.7401016 0.720173 0.01992883 9.2844e-01 6.9611e-04 weaklyHypometh 1.0000e+00 1.6060e-02 weaklyHypometh 9.8087e-01 1.3875e-03 weaklyHypometh 1.0000000 5.5502e-02 weaklyHypometh -0.1244361 2.0179e-02 lowCoverage 0.4386838 lowCoverage chr15 27040450 27041450 46322 APBA2 ENSG00000034053 0.8437464 372 5 0.7406328 169 5 0.689394 57 5 0.7720018 203 5 0.6666667 30 5 0.893998 274 5 0.6047059 51 5 0.9062745 84 5 0.7576720 41 5 0.8564103 41 3 0.878837 227 5 0.8000000 5 0 0.8175231 73 3 0.8411765 51 3 0.8021562 45 3 1.0000000 2 0 NA 0 0 0.8919625 404 5 0.851281 188 5 0.898284 159 5 0.620000 19 3 0.972222 39 3 0.781681 109 5 0.9205128 62 5 0.9750000 36 5 0.8737637 204 5 0.882143 51 3 1.000000 4 0 0.837302 212 5 0.9271607 201 5 0.8610810 304 5 0.693449 239 5 0.6343072 181 5 0.6447939 196 5 0.6739130 138 3 0.666667 15 3 0.6267692 126 5 0.9018492 305 5 0.879848 181 5 0.8497710 254 5 0.8534837 289 5 0.8412346 137 5 0.887011 212 5 0.751408 0.6687372 0.5860071 0.7185340 0.5882353 0.856499 0.460208 0.8898501 0.6455649 0.7888386 0.808789 0.705882 0.8100829 0.766436 0.7096874 0.7441780 NA 0.8505331 0.780844 0.8474146 0.558824 0.9509804 0.678943 0.8831071 0.9926471 0.8395685 0.826681 0.817089 0.760738 0.8559190 0.7815045 0.796920 0.6681052 0.6083570 0.6810478 0.6746539 0.6487783 0.8605626 0.829189 0.8332416 0.75737129 0.7889305 0.8178247 0 0.804927 0.837618 -0.01971428 5 0.858716 0.876626 -0.01790967 9.7906e-01 0.16764354 insignificant 1.000000 1.000000 insignificant 0.99995973 0.0100915 weaklyHypometh 1.00000 1 insignificant -0.04556715 0.2657756 lowCoverage 1 lowCoverage 0.804927 0.7211238 0.0879041 5 0.858716 0.6903062 0.1684099 4.5725e-04 9.9450e-01 weaklyHypermeth 6.3507e-03 1.0000e+00 weaklyHypermeth 4.3784e-03 9.1876e-01 weaklyHypermeth 8.9355e-02 1.0000e+00 weaklyHypermeth 0.12507587 3.2005e-02 lowCoverage 5.6148e-01 lowCoverage 0.804927 0.8443616 -0.0206429 5 0.858716 0.851038 0.0076780 3.3798e-01 2.3866e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.8907e-01 2.1737e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0458107 6.5375e-02 lowCoverage 1.0000000 lowCoverage 0.837618 0.7211238 0.1133283 5 0.876626 0.6903062 0.18631958 1.0143e-03 9.9505e-01 weaklyHypermeth 1.3706e-02 1.0000e+00 weaklyHypermeth 6.2162e-04 9.9943e-01 weaklyHypermeth 1.7761e-02 1.0000e+00 weaklyHypermeth 0.1706430 9.1927e-03 lowCoverage 2.2421e-01 lowCoverage 0.837618 0.8443616 -0.00132056 5 0.876626 0.851038 0.0255877 4.1966e-01 7.7512e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.6389e-01 9.4407e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00024358 9.9447e-01 lowCoverage 1.000000 lowCoverage 0.7211238 0.8443616 -0.11006846 5 0.6903062 0.851038 -0.16073190 9.9204e-01 8.7689e-03 weaklyHypometh 1.0000e+00 1.3286e-01 insignificant 9.9541e-01 3.9106e-02 weaklyHypometh 1.0000000 5.4314e-01 insignificant -0.1708866 9.5622e-03 lowCoverage 0.3576459 lowCoverage chr15 29302350 29303350 46344 TRPM1 ENSG00000134160 0.6573232 78 5 0.5509981 99 6 0.570185 166 5 0.6817978 113 5 0.5536359 81 6 0.609138 198 5 0.6586368 87 6 0.6189884 135 6 0.7129376 105 5 0.6772817 133 5 0.441932 124 6 0.5013083 148 6 0.5839269 130 5 0.6634560 78 5 0.7488178 169 5 0.5453886 125 5 0.8333333 6 0 0.4443747 104 5 0.642774 61 5 0.661338 153 5 0.487662 64 6 0.169478 84 5 0.496504 74 6 0.3054431 89 6 0.6070887 62 6 0.7569748 133 6 0.382587 108 6 0.407440 89 5 0.529277 67 5 0.7952536 116 5 0.4486347 119 6 0.303645 121 6 0.1391210 91 6 0.3544673 67 6 0.4370370 137 6 0.386114 49 4 0.2182906 161 7 0.0406678 129 6 0.647006 116 5 0.5629085 109 5 0.4648581 95 5 0.5767677 82 5 0.549163 118 6 0.653661 0.5362586 0.6060116 0.7472320 0.5990528 0.755818 0.690290 0.7068383 0.7100606 0.6974333 0.700759 0.459485 0.6701168 0.715170 0.7819522 0.6315970 0.6302810 0.5351355 0.625585 0.7000618 0.437067 0.2585935 0.469052 0.2536802 0.6492333 0.7865725 0.414230 0.466134 0.537521 0.7820677 0.6381538 0.325762 0.1522883 0.3967460 0.3808889 0.4433846 0.2523674 0.0476624 0.633635 0.5394902 0.63343590 0.6664848 0.5497079 5 0.668556 0.481350 0.15756459 6 0.565985 0.388182 0.17780303 9.7570e-06 0.99847254 weaklyHypermeth 0.009757 1.000000 weaklyHypermeth 0.00033792 0.9985656 weaklyHypermeth 0.33792 1 insignificant 0.14371294 0.0239450 weaklyHypermeth 1 insignificant 0.668556 0.2523659 0.3964158 6 0.565985 0.2304958 0.3354893 4.6827e-19 9.9997e-01 hypermethylated 2.6015e-17 1.0000e+00 hypermethylated 8.9441e-07 1.0000e+00 hypermethylated 4.4720e-05 1.0000e+00 hypermethylated 0.35526233 1.6307e-03 weaklyHypermeth 6.2326e-02 weaklyHypermeth 0.669291 0.6269231 0.0619089 5 0.611563 0.442566 0.1689971 5.0553e-02 9.9696e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.0320e-01 9.9901e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0577380 1.4683e-01 insignificant 1.0000000 insignificant 0.481350 0.2523659 0.2373922 6 0.388182 0.2304958 0.15768630 3.4551e-04 9.9937e-01 hypermethylated 5.8561e-03 1.0000e+00 hypermethylated 1.6392e-03 1.0000e+00 weaklyHypermeth 4.0980e-02 1.0000e+00 weaklyHypermeth 0.2115494 2.5159e-02 weaklyHypermeth 4.8382e-01 insignificant 0.483005 0.6269231 -0.09199497 5 0.429584 0.442566 -0.0129821 9.4401e-01 2.0240e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6762e-01 2.7333e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.08597497 1.7484e-01 insignificant 1.000000 insignificant 0.2535885 0.6269231 -0.34655124 5 0.1919317 0.442566 -0.25063407 1.0000e+00 2.7136e-06 hypomethylated 1.0000e+00 1.1530e-04 hypomethylated 1.0000e+00 6.5899e-04 hypomethylated 1.0000000 4.0713e-02 hypomethylated -0.2975244 3.7913e-03 weaklyHypometh 0.1895651 insignificant chr15 29439850 29440850 46351 KLF13 ENSG00000169926 0.7879588 92 4 0.4517125 156 5 0.848263 79 4 0.8452875 144 5 0.7162698 72 4 0.702642 164 5 0.6818598 113 4 0.7585218 99 4 0.8631290 62 3 0.9478261 53 3 0.840567 146 6 0.6533835 36 4 0.6761494 56 2 0.6753247 51 3 0.6862302 71 3 0.7500000 16 2 0.0833333 108 1 0.7316913 53 3 0.725692 130 3 0.845556 121 4 0.871534 71 5 0.716374 38 2 0.610563 114 4 0.7698184 68 4 0.8823485 93 4 0.8499321 151 5 0.752261 96 4 0.818182 51 4 0.636732 127 4 0.7988267 149 5 0.9343776 166 5 0.849273 130 5 0.5951836 144 5 0.7282986 95 3 0.8333333 165 4 0.666667 10 0 0.6532084 122 4 0.8599249 167 5 0.753284 160 5 0.7931723 117 5 0.5336886 80 4 0.6771886 80 4 0.644792 129 5 0.889847 0.7875795 0.7700216 0.8508435 0.7573842 0.878432 0.876807 0.8425934 0.7834924 0.9629847 0.919500 0.740632 0.7790308 0.869165 0.7698713 0.8986486 0.7673390 0.7842498 0.823099 0.8439940 0.915884 0.7837044 0.882046 0.8219335 0.8908093 0.8958112 0.713769 0.786460 0.864152 0.8534942 0.9029262 0.847500 0.8026429 0.8322072 0.8581081 0.8203296 0.8178593 0.9258439 0.833855 0.8308967 0.71219359 0.7734098 0.8279712 1 0.763447 0.846154 -0.05599844 4 0.711992 0.762466 -0.05047390 9.4320e-01 0.03445399 lowCoverage 1.000000 1.000000 lowCoverage 0.78164710 0.2432449 lowCoverage 1.00000 1 lowCoverage -0.07728208 0.1303033 lowCoverage 1 lowCoverage 0.763346 0.8632479 -0.0574284 4 0.665418 0.8281364 -0.1627184 9.9007e-01 1.5852e-02 lowCoverage 1.0000e+00 6.7519e-01 lowCoverage 4.7992e-01 4.4540e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.00919939 8.7855e-01 lowCoverage 1.0000e+00 lowCoverage 0.763636 0.8197880 -0.0028786 4 0.692988 0.632110 0.0608772 1.7059e-01 6.1897e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 2.8098e-02 9.3897e-01 lowCoverage 8.2643e-01 1.0000000 lowCoverage 0.0331447 5.9615e-01 lowCoverage 1.0000000 lowCoverage 0.847512 0.8620199 -0.0072540 4 0.857774 0.7246193 0.13315456 8.0220e-01 6.6945e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 4.9222e-01 4.5983e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0680827 2.1722e-01 lowCoverage 1.0000e+00 lowCoverage 0.847021 0.8197880 0.04054044 4 0.810365 0.632110 0.1782547 9.9456e-03 9.9524e-01 lowCoverage 2.6880e-01 1.0000e+00 lowCoverage 8.1632e-03 9.9985e-01 lowCoverage 3.5492e-01 1.0000e+00 lowCoverage 0.11042677 7.5394e-02 lowCoverage 1.000000 lowCoverage 0.8628571 0.8197880 0.05845981 5 0.7994924 0.632110 0.16738197 2.8155e-04 9.7537e-01 weaklyHypermeth 2.8155e-02 1.0000e+00 weaklyHypermeth 1.7364e-02 9.3591e-01 weaklyHypermeth 1.0000000 1.0000e+00 insignificant 0.0423441 5.1450e-01 lowCoverage 1.0000000 lowCoverage chr15 29444150 29445150 46353 KLF13 ENSG00000169926 0.5671730 192 7 0.3495481 173 6 0.426718 177 6 0.4557196 135 7 0.3431594 117 6 0.676824 301 7 0.3803357 188 7 0.4108488 206 7 0.4939511 196 6 0.4809074 130 6 0.608783 274 7 0.4976936 108 6 0.2528413 259 6 0.6840659 40 2 0.3846659 196 7 0.4714223 120 7 0.4336689 120 6 0.6456669 156 7 0.224819 229 7 0.308580 308 7 0.620764 134 7 0.480774 115 5 0.461707 162 7 0.5260104 139 7 0.5790043 36 2 0.4231292 175 7 0.347998 116 7 0.416589 79 6 0.233814 115 7 0.3456911 296 7 0.3996077 230 7 0.518678 334 7 0.4264913 179 7 0.4670557 141 5 0.6726582 242 5 0.678571 14 0 0.4887389 148 7 0.7348933 155 7 0.458586 140 7 0.7069963 125 7 0.3871912 124 7 0.5729292 102 7 0.589037 169 7 0.576300 0.4283249 0.5517117 0.4869770 0.4220108 0.705611 0.378719 0.4993548 0.4298529 0.4510588 0.688059 0.558140 0.2631282 0.525234 0.4020030 0.5524463 0.4747347 0.6599598 0.210522 0.3477039 0.632668 0.5468576 0.484130 0.6144631 0.5372667 0.4992176 0.368578 0.540153 0.295977 0.4372779 0.4618578 0.579978 0.3696949 0.5145002 0.6978994 0.6157556 0.5092513 0.7932805 0.498477 0.7273823 0.42089468 0.6200032 0.6207934 6 0.446621 0.468669 -0.02092655 7 0.504131 0.385832 0.11829920 8.3591e-01 0.52792005 insignificant 1.000000 1.000000 insignificant 0.57687780 0.5142702 insignificant 1.00000 1 insignificant 0.00872233 0.8409672 insignificant 1 insignificant 0.446315 0.5767918 -0.1219375 7 0.433293 0.5562126 -0.1229200 8.8935e-06 5.3019e-10 weaklyHypometh 1.6780e-04 1.0604e-07 weaklyHypometh 9.0546e-02 1.2102e-05 weaklyHypometh 1.0000e+00 3.0255e-03 weaklyHypometh -0.12319860 7.8540e-02 insignificant 1.0000e+00 insignificant 0.446315 0.5530303 -0.1044881 7 0.433293 0.541845 -0.1085527 9.9740e-01 1.5950e-03 weaklyHypometh 1.0000e+00 1.4500e-01 insignificant 9.9951e-01 1.6614e-02 weaklyHypometh 1.0000e+00 0.7255143 insignificant -0.0880784 2.0642e-01 insignificant 1.0000000 insignificant 0.468912 0.5767918 -0.0866274 7 0.440951 0.5562126 -0.11526194 2.6498e-03 4.8567e-08 weaklyHypometh 3.3972e-02 1.2142e-05 weaklyHypometh 1.1271e-01 1.5801e-04 weaklyHypometh 1.0000e+00 3.1602e-02 weaklyHypometh -0.1319209 6.4947e-02 insignificant 9.7964e-01 insignificant 0.468912 0.5530303 -0.08348172 7 0.440951 0.541845 -0.1008947 9.9861e-01 2.2466e-03 weaklyHypometh 1.0000e+00 3.7444e-01 insignificant 9.9894e-01 7.2599e-03 weaklyHypometh 1.0000e+00 8.8633e-01 insignificant -0.09680070 1.7368e-01 insignificant 1.000000 insignificant 0.5767918 0.5530303 0.01578851 7 0.5562126 0.541845 0.01436728 2.8317e-02 9.7805e-03 weaklyHypermeth 1.0000e+00 1.4175e-01 insignificant 4.5176e-02 1.9182e-01 weaklyHypermeth 1.0000000 1.0000e+00 insignificant 0.0351202 6.6023e-01 insignificant 1.0000000 insignificant chr15 30767550 30768550 46370 SCG5 ENSG00000166922 0.7956468 323 10 0.8377844 312 10 0.658859 158 10 0.7809764 234 9 0.7301339 190 10 0.758921 285 10 0.7225416 174 10 0.8396282 256 10 0.6708832 210 9 0.7661931 180 10 0.807648 321 10 0.7391460 141 8 0.7385626 376 10 0.8082166 131 10 0.7073041 204 10 0.6668955 170 8 0.7320187 212 7 0.5684190 237 9 0.715939 232 10 0.768472 278 11 0.789268 85 7 0.761310 115 10 0.744898 301 10 0.7711312 99 9 0.7490119 68 6 0.8103204 266 10 0.735220 139 11 0.763792 52 4 0.805462 291 10 0.7704585 287 11 0.8188932 217 10 0.716124 285 10 0.7469104 287 10 0.6839615 195 11 0.7087200 240 10 0.623024 76 5 0.6627182 185 10 0.7155355 314 10 0.766762 280 7 0.8147435 291 10 0.7104723 280 9 0.8163261 234 7 0.843790 240 10 0.783489 0.7775481 0.6916739 0.7425547 0.7404466 0.733629 0.735180 0.7736766 0.6873691 0.8188528 0.810436 0.748756 0.7798388 0.840760 0.7943761 0.7534207 0.7707858 0.7092988 0.769641 0.7454648 0.749833 0.7303619 0.773928 0.8013209 0.7347293 0.7662652 0.718271 0.784623 0.782814 0.7486007 0.7908511 0.703583 0.6712289 0.6135048 0.7567490 0.6726443 0.7571376 0.7727801 0.769113 0.7800808 0.72751584 0.8072667 0.8183308 4 0.758002 0.793651 -0.00361604 10 0.748198 0.752534 -0.00433660 6.8720e-01 0.11415220 insignificant 1.000000 1.000000 insignificant 0.71450858 0.1345488 insignificant 1.00000 1 insignificant -0.02894793 0.1070514 insignificant 1 insignificant 0.758002 0.7602159 0.0345802 10 0.748198 0.7187823 0.0294155 1.3439e-02 9.5692e-01 weaklyHypermeth 1.4932e-01 1.0000e+00 insignificant 9.0717e-02 9.9135e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.05056460 4.8454e-02 weaklyHypermeth 7.4545e-01 insignificant 0.757963 0.7509434 -0.0249487 9 0.743731 0.805536 -0.0618049 9.4054e-01 9.8865e-03 weaklyHypometh 1.0000e+00 5.4925e-01 insignificant 9.8948e-01 7.2397e-03 weaklyHypometh 1.0000e+00 0.4826496 insignificant -0.0497092 1.1378e-01 insignificant 1.0000000 insignificant 0.793651 0.7602159 0.0360802 10 0.752534 0.7187823 0.03375215 3.1419e-02 9.9990e-01 weaklyHypermeth 3.0211e-01 1.0000e+00 insignificant 1.1323e-01 9.9995e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0795125 4.3885e-03 weaklyHypermeth 1.1917e-01 insignificant 0.793824 0.7509434 -0.02027421 9 0.794624 0.805536 -0.0109122 9.5345e-01 2.3710e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.1059e-01 2.1401e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02076125 4.4618e-01 insignificant 1.000000 insignificant 0.7612056 0.7509434 -0.07077262 9 0.7552461 0.805536 -0.05028967 9.9922e-01 7.0664e-04 weaklyHypometh 1.0000e+00 1.6060e-02 weaklyHypometh 9.9998e-01 1.2327e-02 weaklyHypometh 1.0000000 2.6298e-01 insignificant -0.1002738 9.6564e-03 weaklyHypometh 0.3576459 insignificant chr15 30809750 30810750 46372 GREM1 ENSG00000166923 0.1203277 326 7 0.2164011 314 7 0.177419 160 7 0.1416231 252 5 0.1857561 108 5 0.146278 334 5 0.3411389 158 6 0.3433782 163 6 0.2155868 221 6 0.1818014 182 5 0.365339 201 5 0.1716978 110 5 0.1988845 195 5 0.4081311 111 5 0.3777493 238 5 0.3033019 112 5 0.3004808 43 3 0.2908600 295 5 0.100343 187 5 0.227693 279 7 0.378571 67 4 0.215028 128 5 0.348105 167 7 0.2664225 77 5 0.2628778 82 5 0.5491279 275 7 0.187113 167 5 0.279716 68 5 0.171430 175 5 0.2945515 337 7 0.1925315 310 7 0.227803 228 5 0.4199475 231 7 0.4133641 141 5 0.2500000 85 3 0.200000 24 3 0.2972214 141 5 0.2836718 253 7 0.399687 322 5 0.1928062 212 7 0.5063333 338 5 0.1916013 318 5 0.291516 295 5 0.209328 0.1707023 0.3416297 0.2284478 0.2194312 0.253682 0.239768 0.2467415 0.1464824 0.2097722 0.269268 0.221585 0.1441662 0.300861 0.2650708 0.3198436 0.2013565 0.2661367 0.132880 0.2360107 0.516149 0.2483560 0.326486 0.2718962 0.2975452 0.4321727 0.207694 0.210698 0.224638 0.3194209 0.2792331 0.314255 0.3749219 0.3516093 0.3226410 0.2450593 0.3819105 0.2438165 0.348301 0.2951907 0.52536184 0.2984393 0.2924244 5 0.239719 0.308173 -0.07501667 5 0.188697 0.322829 -0.13413157 9.9122e-01 0.00002611 weaklyHypometh 1.000000 0.013055 weaklyHypometh 0.99957882 0.0070701 weaklyHypometh 1.00000 1 insignificant -0.04039704 0.2857699 insignificant 1 insignificant 0.240090 0.4091429 -0.1124106 5 0.320775 0.2991424 0.0216324 9.1220e-01 5.2774e-05 weaklyHypometh 1.0000e+00 5.2774e-03 weaklyHypometh 5.1909e-01 3.7924e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.06999129 1.2957e-01 insignificant 1.0000e+00 insignificant 0.233773 0.3636364 -0.1135379 5 0.123805 0.403501 -0.2796963 9.9730e-01 2.6046e-05 weaklyHypometh 1.0000e+00 7.3549e-03 weaklyHypometh 9.8551e-01 1.2141e-03 weaklyHypometh 1.0000e+00 0.1734395 insignificant -0.0756793 2.9363e-01 insignificant 1.0000000 insignificant 0.307618 0.4096110 -0.0279679 7 0.278536 0.3365352 -0.05799908 2.8237e-01 1.2769e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.3447e-01 1.9960e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0295942 5.4349e-01 insignificant 1.0000e+00 insignificant 0.306835 0.3636364 -0.03243272 5 0.306411 0.403501 -0.0970902 1.2632e-01 5.0857e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 3.4208e-01 1.7071e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03528223 6.2315e-01 insignificant 1.000000 insignificant 0.4057803 0.3623482 0.01346685 5 0.2735006 0.233073 0.04042732 8.5690e-03 1.8786e-01 weaklyHypermeth 5.3556e-01 1.0000e+00 insignificant 8.3019e-02 1.4539e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.0056880 9.3847e-01 insignificant 1.0000000 insignificant chr15 32801150 32802150 46413 GOLGA8B ENSG00000215252 0.0963599 687 18 0.1268925 717 18 0.104216 459 17 0.0926800 494 18 0.0664150 379 17 0.087440 975 18 0.0484347 508 17 0.1336870 563 18 0.0700720 455 17 0.0694673 477 17 0.164187 705 18 0.0306614 299 16 0.1646344 454 18 0.1238405 103 5 0.1129450 498 16 0.0737087 302 17 0.0747076 207 9 0.0425126 525 18 0.110974 570 17 0.161327 781 18 0.148476 242 17 0.084994 420 18 0.082504 339 18 0.0624173 350 17 0.1358400 431 15 0.0788952 782 18 0.068967 584 18 0.046854 224 14 0.085618 530 18 0.0471985 930 18 0.1498928 876 18 0.090127 960 18 0.0069562 595 18 0.0304938 413 17 0.0000000 378 12 0.027778 275 9 0.0735360 360 19 0.0036000 977 18 0.012110 879 18 0.0141931 802 18 0.0091527 643 14 0.0108842 579 13 0.050184 804 18 0.082197 0.0687011 0.0920906 0.0829080 0.0445539 0.078964 0.044643 0.0732734 0.0631797 0.0795426 0.100262 0.031075 0.0985251 0.083405 0.0626762 0.0943181 0.0524277 0.0453910 0.051120 0.0652375 0.128623 0.0297411 0.073051 0.0688283 0.0826720 0.0588661 0.058160 0.055054 0.063153 0.0425445 0.0440068 0.075195 0.0055785 0.0181200 0.0017740 0.0508753 0.0120942 0.0047712 0.010661 0.0155002 0.00709185 0.0110760 0.0619424 12 0.079937 0.081146 0.00970864 18 0.108683 0.094352 0.01433132 5.4952e-02 0.96115142 insignificant 1.000000 1.000000 insignificant 0.10272785 0.9480436 insignificant 1.00000 1 insignificant 0.00760945 0.5824744 insignificant 1 insignificant 0.079945 0.0073407 0.0853750 18 0.114118 0.0133656 0.1007520 2.3004e-17 1.0000e+00 weaklyHypermeth 1.0456e-15 1.0000e+00 weaklyHypermeth 4.2349e-10 1.0000e+00 weaklyHypermeth 5.2936e-08 1.0000e+00 weaklyHypermeth 0.07403080 2.3685e-04 weaklyHypermeth 1.1843e-02 weaklyHypermeth 0.079945 0.0267062 0.0614081 18 0.114118 0.018740 0.0953775 2.0878e-10 1.0000e+00 weaklyHypermeth 2.0878e-08 1.0000e+00 weaklyHypermeth 2.4638e-06 1.0000e+00 weaklyHypermeth 2.2398e-04 1.0000000 weaklyHypermeth 0.0784533 6.1934e-06 weaklyHypermeth 0.0015483 weaklyHypermeth 0.081170 0.0076718 0.0879625 18 0.094352 0.0603482 0.03400390 3.9881e-12 9.9840e-01 weaklyHypermeth 1.6617e-10 1.0000e+00 weaklyHypermeth 4.3302e-07 9.9987e-01 weaklyHypermeth 2.8868e-05 1.0000e+00 weaklyHypermeth 0.0664213 8.1562e-04 weaklyHypermeth 3.6830e-02 weaklyHypermeth 0.081182 0.0267062 0.06216737 18 0.099070 0.018740 0.0803296 5.4260e-07 9.8004e-01 weaklyHypermeth 3.6173e-05 1.0000e+00 weaklyHypermeth 3.3217e-04 9.5434e-01 weaklyHypermeth 2.2145e-02 1.0000e+00 weaklyHypermeth 0.07084387 7.5793e-05 weaklyHypermeth 0.018948 weaklyHypermeth 0.0073407 0.0267062 -0.02804314 18 0.0133656 0.018740 -0.00537453 9.8579e-01 7.0556e-03 weaklyHypometh 1.0000e+00 1.0855e-01 insignificant 9.9944e-01 5.9248e-02 insignificant 1.0000000 7.6946e-01 insignificant 0.0044225 7.5401e-01 insignificant 1.0000000 insignificant chr15 33072150 33073150 46425 ZNF770 ENSG00000198146 0.6876284 226 6 0.5869445 338 6 0.632035 117 6 0.7682540 178 6 0.7174152 128 6 0.590686 263 7 0.6837051 108 6 0.6758929 198 6 0.6604858 116 6 0.5973292 110 6 0.713746 259 6 0.5847222 52 6 0.6936296 162 6 0.6525950 86 6 0.7028230 151 6 0.7083333 20 2 0.5333333 12 2 0.6721051 173 6 0.646145 143 6 0.699465 264 6 0.804592 74 5 0.556022 65 4 0.606158 161 6 0.7399425 86 5 0.6414835 65 4 0.6320153 168 6 0.750126 88 6 0.603367 62 4 0.703431 161 6 0.6907051 292 6 0.6960572 249 6 0.731003 301 7 0.6458423 179 6 0.5445513 60 6 0.7278669 52 3 0.750000 19 2 0.5264432 193 6 0.7412821 213 6 0.753752 141 6 0.6820600 187 6 0.7251355 126 6 0.7535714 144 4 0.724919 185 6 0.660618 0.6166942 0.5574751 0.6702669 0.6317782 0.554475 0.632386 0.5935754 0.5836014 0.5790290 0.598665 0.499814 0.5612774 0.570607 0.6224660 0.6312849 0.6543330 0.6203963 0.604181 0.5690607 0.705587 0.6171541 0.627971 0.6721248 0.6700666 0.6660016 0.691996 0.620744 0.622083 0.6212577 0.6600815 0.655305 0.5754990 0.4483455 0.6353081 0.7511949 0.5420503 0.6377181 0.666999 0.6506611 0.67575056 0.6272088 0.6490141 4 0.636598 0.720655 -0.03700984 6 0.654554 0.687370 -0.03281650 9.9814e-01 0.01388710 weaklyHypometh 1.000000 0.734416 insignificant 0.90060529 0.0368775 weaklyHypometh 1.00000 1 insignificant -0.01921147 0.4446958 insignificant 1 insignificant 0.636598 0.6662011 0.0218680 6 0.654554 0.6336507 0.0209031 5.3824e-03 6.3855e-01 weaklyHypermeth 6.4076e-02 1.0000e+00 weaklyHypermeth 6.6494e-02 7.0251e-01 insignificant 8.2092e-01 1.0000e+00 insignificant 0.00436608 9.2250e-01 lowCoverage 1.0000e+00 lowCoverage 0.636598 0.5683269 -0.0480027 6 0.654554 0.752944 -0.0983902 9.8546e-01 3.2117e-02 weaklyHypometh 1.0000e+00 9.6438e-01 insignificant 9.9898e-01 7.8125e-03 weaklyHypometh 1.0000e+00 0.4882790 insignificant -0.0675237 2.8600e-03 weaklyHypometh 0.1191680 insignificant 0.720655 0.6662011 0.0595277 6 0.687370 0.6336507 0.05371964 3.8857e-04 9.8746e-01 weaklyHypermeth 6.4761e-03 1.0000e+00 weaklyHypermeth 2.4226e-02 9.8422e-01 weaklyHypermeth 3.5626e-01 1.0000e+00 insignificant 0.0235776 6.2341e-01 lowCoverage 1.0000e+00 lowCoverage 0.720655 0.5683269 -0.00695575 6 0.687370 0.752944 -0.0655737 7.1215e-01 6.1438e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.1407e-01 3.0143e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04831226 6.9754e-02 insignificant 1.000000 insignificant 0.6662011 0.5683269 -0.06241526 6 0.6336507 0.752944 -0.11929337 9.9306e-01 1.4387e-02 weaklyHypometh 1.0000e+00 1.8931e-01 insignificant 9.9686e-01 3.2301e-02 weaklyHypometh 1.0000000 4.6145e-01 insignificant -0.0718898 1.4647e-01 lowCoverage 1.0000000 lowCoverage chr15 33734750 33735750 46436 ATPBD4 ENSG00000134146 0.7885562 676 30 0.8138374 423 29 0.806593 384 30 0.8880483 539 31 0.7675447 322 18 0.867494 546 30 0.8718381 237 20 0.8714481 368 23 0.8059838 277 23 0.8525629 468 25 0.851130 682 29 0.7763849 170 10 0.8365342 612 24 0.7840216 221 11 0.8074154 411 22 0.8029685 133 11 0.7794913 109 9 0.8501462 706 28 0.842665 514 29 0.846755 618 31 0.840470 262 24 0.877956 243 20 0.892833 483 28 0.8821694 223 16 0.8786229 248 19 0.8587905 349 27 0.825285 427 24 0.831403 149 12 0.881657 390 23 0.8638527 372 29 0.8987544 317 29 0.818801 645 28 0.8303160 376 28 0.8304754 503 27 0.8298951 490 28 0.907252 131 13 0.7767129 288 23 0.8292628 297 17 0.865104 509 32 0.8672651 661 32 0.8657290 543 29 0.9005429 420 31 0.873880 478 31 0.832870 0.8360650 0.7830679 0.8951771 0.8013194 0.904539 0.892974 0.8676555 0.8533439 0.8746427 0.884154 0.836784 0.8989315 0.860414 0.8314236 0.8189857 0.8342131 0.8650643 0.881747 0.8759537 0.845899 0.9149368 0.907204 0.8789275 0.9022604 0.8939970 0.852491 0.867011 0.869383 0.8836078 0.8965235 0.848040 0.8520618 0.8079910 0.8325786 0.9186408 0.8624322 0.8630468 0.892716 0.8966611 0.87386361 0.9082296 0.8854071 7 0.857499 0.872931 -0.01304483 24 0.853818 0.863689 -0.00987116 9.4340e-01 0.21466326 insignificant 1.000000 1.000000 insignificant 0.99376014 0.0075205 weaklyHypometh 1.00000 1 insignificant -0.03697863 0.0029786 weaklyHypometh 1 insignificant 0.857516 0.8345324 0.0241372 25 0.853818 0.8141916 0.0396265 1.8128e-05 9.8423e-01 weaklyHypermeth 3.2960e-04 1.0000e+00 weaklyHypermeth 1.9434e-01 6.3092e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00841479 6.6889e-01 insignificant 1.0000e+00 insignificant 0.857499 0.8896974 -0.0316260 29 0.853818 0.875794 -0.0219763 9.4385e-01 1.1942e-04 weaklyHypometh 1.0000e+00 1.9904e-02 weaklyHypometh 9.9579e-01 1.3593e-04 weaklyHypometh 1.0000e+00 0.0453086 weaklyHypometh -0.0489333 2.4306e-04 weaklyHypometh 0.0288063 weaklyHypometh 0.872900 0.8344530 0.0379684 23 0.859680 0.8087267 0.05095343 1.2777e-06 9.9713e-01 weaklyHypermeth 3.2763e-05 1.0000e+00 weaklyHypermeth 1.9423e-02 9.3700e-01 weaklyHypermeth 3.0660e-01 1.0000e+00 insignificant 0.0285638 1.7085e-01 insignificant 1.0000e+00 insignificant 0.872931 0.8896974 -0.02171457 24 0.863689 0.875794 -0.0121052 9.5117e-01 4.3683e-03 weaklyHypometh 1.0000e+00 4.0444e-01 insignificant 9.2347e-01 1.5609e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01195467 2.6860e-01 insignificant 1.000000 insignificant 0.8344530 0.8896552 -0.05936913 25 0.8087267 0.872141 -0.06341462 9.9958e-01 6.6459e-10 weaklyHypometh 1.0000e+00 5.5383e-08 weaklyHypometh 9.9547e-01 7.7898e-04 weaklyHypometh 1.0000000 4.0713e-02 weaklyHypometh -0.0405185 6.5635e-02 insignificant 0.8869651 insignificant chr15 35135850 35136850 46465 ENSG00000206676 0.8333333 11 0 0.5377778 53 5 0.604658 82 5 0.3333333 6 0 0.5545185 92 5 0.626667 21 3 0.6556609 101 5 0.5357143 50 4 0.2792857 78 5 0.5076118 82 5 0.722543 138 5 0.4512500 110 5 0.3113440 139 5 NA 0 0 0.4694363 115 5 0.3750000 114 5 0.1681326 129 5 0.5523810 24 2 0.243903 173 5 0.526667 34 5 0.542222 40 4 0.000000 4 0 0.457333 85 5 0.2838095 37 4 0.0000000 4 0 0.5910290 76 5 0.690000 40 5 0.770000 31 4 0.356166 76 5 0.5223704 99 5 0.3417874 91 5 0.626667 31 3 0.6500916 46 5 0.8137227 123 5 0.9357143 131 4 0.700000 20 2 0.8634921 36 5 0.9333333 41 5 0.245238 28 2 0.0000000 18 2 0.0000000 4 0 0.2444444 16 3 0.000000 12 0 0.813131 0.4882155 0.5726990 0.4514448 0.5302581 0.711111 0.702617 0.5746753 0.3020563 0.5262747 0.708764 0.456629 0.3385663 NA 0.4692625 0.3825758 0.1605481 0.5569986 0.250222 0.5262626 0.550168 0.0184476 0.469293 0.2695527 0.0184476 0.5934399 0.740909 0.734848 0.363618 0.6214590 0.3448983 0.620202 0.7158813 0.8818917 0.9515321 0.8939394 0.8763829 0.8888889 0.242063 0.0000000 0.00441919 0.1686869 0.0252525 0 0.456186 0.500000 -0.04833473 5 0.449238 0.491722 -0.04248359 8.9203e-01 0.14223488 insignificant 1.000000 1.000000 insignificant 0.38850949 0.8856313 insignificant 1.00000 1 insignificant 0.05712410 0.4925221 lowCoverage 1 lowCoverage 0.456186 0.8639798 -0.4202777 5 0.449238 0.8410167 -0.3917785 1.0000e+00 1.7638e-15 hypomethylated 1.0000e+00 8.8191e-13 hypomethylated 1.0000e+00 1.3934e-08 hypomethylated 1.0000e+00 1.3934e-05 hypomethylated -0.32715284 2.0365e-04 lowCoverage 1.0718e-02 lowCoverage 0.456186 0.1410256 0.3369421 0 0.449238 0.140381 0.3088575 1.3684e-08 1.0000e+00 noCoverage 1.1403e-06 1.0000e+00 noCoverage 3.2440e-08 1.0000e+00 noCoverage 4.0550e-06 1.0000000 noCoverage 0.3909696 6.4985e-04 lowCoverage 0.0464175 lowCoverage 0.500000 0.8639798 -0.3668553 5 0.491722 0.8410167 -0.34929494 1.0000e+00 5.5058e-12 hypomethylated 1.0000e+00 1.8353e-09 hypomethylated 1.0000e+00 3.8382e-08 hypomethylated 1.0000e+00 3.6749e-05 hypomethylated -0.3842769 4.1016e-04 lowCoverage 2.1588e-02 lowCoverage 0.500000 0.1410256 0.38746371 0 0.491722 0.140381 0.3513411 2.3972e-09 1.0000e+00 noCoverage 1.9977e-07 1.0000e+00 noCoverage 1.7062e-05 1.0000e+00 noCoverage 1.5511e-03 1.0000e+00 noCoverage 0.33384554 3.1822e-03 lowCoverage 0.265184 lowCoverage 0.8639798 0.1410256 0.73335555 0 0.8410167 0.140381 0.70063605 8.8687e-17 1.0000e+00 noCoverage 8.8687e-14 1.0000e+00 noCoverage 1.2042e-06 1.0000e+00 noCoverage 0.0012042 1.0000e+00 noCoverage 0.7181225 1.2664e-05 lowCoverage 0.0063321 lowCoverage chr15 38148650 38149650 46548 ENSG00000206058 0.4100760 509 15 0.3739524 425 12 0.312134 355 11 0.4339263 494 15 0.3018655 266 11 0.606412 541 12 0.5515314 293 12 0.2994063 413 15 0.2794630 294 12 0.3853311 308 12 0.498218 517 15 0.4850927 237 9 0.3673049 359 9 0.5146047 157 7 0.3510430 501 15 0.1990059 170 9 0.1620401 136 5 0.4010443 614 15 0.171370 568 15 0.300631 490 15 0.525627 222 11 0.248084 321 12 0.512771 212 15 0.3935463 234 11 0.5020122 546 15 0.4285623 564 15 0.481219 442 14 0.501819 165 9 0.349124 337 11 0.3028206 674 12 0.2220896 643 15 0.679126 472 15 0.1813080 298 13 0.0917936 340 15 0.2727273 100 3 0.092997 151 10 0.1937815 318 12 0.1153230 617 15 0.157986 562 15 0.2110137 504 15 0.1860053 532 15 0.2790981 449 14 0.175937 530 15 0.384805 0.2977627 0.3516221 0.4010123 0.3940723 0.562826 0.471933 0.2560590 0.3120566 0.4346049 0.556977 0.454685 0.2112137 0.392391 0.3068191 0.2544922 0.1025377 0.3524016 0.132179 0.2802935 0.510756 0.1796918 0.551121 0.3760888 0.4751320 0.4313989 0.489141 0.606547 0.399604 0.3796769 0.2188586 0.687352 0.0291375 0.0366074 0.0320416 0.0375556 0.0308541 0.0361576 0.159265 0.2106627 0.21984967 0.2979934 0.1584987 9 0.353957 0.441798 -0.07359679 15 0.411104 0.445559 -0.03445502 9.9995e-01 0.00086845 weaklyHypometh 1.000000 0.217111 insignificant 0.99279997 0.0305867 weaklyHypometh 1.00000 1 insignificant -0.05867729 0.2240100 insignificant 1 insignificant 0.353897 0.0904605 0.2899595 15 0.408021 0.1938100 0.2142112 9.4789e-31 1.0000e+00 hypermethylated 1.1849e-28 1.0000e+00 hypermethylated 7.2008e-21 9.9999e-01 hypermethylated 2.4003e-18 1.0000e+00 hypermethylated 0.21223423 9.2672e-05 hypermethylated 5.1484e-03 hypermethylated 0.353681 0.1827707 0.1549428 15 0.349198 0.195745 0.1534526 2.5509e-10 1.0000e+00 weaklyHypermeth 2.3190e-08 1.0000e+00 weaklyHypermeth 2.7876e-08 1.0000e+00 weaklyHypermeth 3.9822e-06 1.0000000 weaklyHypermeth 0.1682145 1.2280e-04 weaklyHypermeth 0.0175429 weaklyHypermeth 0.441793 0.0904605 0.3569464 15 0.445755 0.1938100 0.25194544 5.3778e-31 1.0000e+00 hypermethylated 1.3444e-28 1.0000e+00 hypermethylated 5.2821e-18 9.9993e-01 hypermethylated 2.6411e-15 1.0000e+00 hypermethylated 0.2709115 3.8055e-05 hypermethylated 2.3784e-03 hypermethylated 0.441909 0.1827707 0.23185634 15 0.455559 0.195745 0.2598143 3.0697e-14 1.0000e+00 hypermethylated 3.8372e-12 1.0000e+00 hypermethylated 4.1486e-10 1.0000e+00 hypermethylated 4.1486e-07 1.0000e+00 hypermethylated 0.22689179 1.0698e-04 hypermethylated 0.021397 hypermethylated 0.0899616 0.1828416 -0.12246594 15 0.1434231 0.207979 -0.06455600 7.3720e-01 2.2727e-15 weaklyHypometh 1.0000e+00 4.5453e-13 weaklyHypometh 8.5834e-01 4.7244e-10 weaklyHypometh 1.0000000 1.5748e-07 weaklyHypometh -0.0440197 2.5302e-01 insignificant 1.0000000 insignificant chr15 38178050 38179050 46556 ENSG00000206058 0.5938739 136 4 0.6029577 403 7 0.499023 162 4 0.8164548 135 4 0.5781508 193 7 0.624507 218 4 0.5020315 191 6 0.4357676 180 7 0.6146877 111 3 0.5125514 111 3 0.495418 308 7 0.3911565 60 3 0.3583223 155 3 0.8481319 103 4 0.4351270 172 4 0.1251196 104 3 0.0000000 14 1 0.4659704 147 3 0.493605 308 5 0.722691 188 4 0.518137 116 7 0.185441 86 4 0.719735 131 3 0.2610659 131 7 0.4816017 55 2 0.6273665 401 7 0.447272 250 7 0.228327 112 6 0.439365 285 3 0.3728857 456 7 0.5752599 413 7 0.390206 208 3 0.0880277 284 7 0.1155727 220 4 0.1080247 225 3 0.166667 19 1 0.1269880 329 6 0.1153090 420 7 0.276798 238 4 0.2396831 207 4 0.4191130 133 4 0.3488875 163 3 0.276838 129 4 0.676644 0.5715904 0.4365730 0.6762350 0.5873805 0.731284 0.546629 0.6145662 0.6900996 0.6294337 0.678932 0.462986 0.5209796 0.704440 0.6103361 0.1843843 0.4800517 0.3805179 0.545188 0.7198233 0.683862 0.1490356 0.786124 0.5554816 0.5363533 0.6160887 0.606680 0.508591 0.692032 0.5507432 0.6649245 0.653002 0.0466387 0.0318851 0.0780980 0.0341297 0.0629451 0.0354719 0.244204 0.1898714 0.40578515 0.1748433 0.3499441 3 0.557975 0.571483 -0.02847042 4 0.345667 0.421667 -0.07600004 3.7979e-01 0.79622720 lowCoverage 1.000000 1.000000 lowCoverage 0.57014356 0.8746014 lowCoverage 1.00000 1 lowCoverage 0.06855557 0.2979450 lowCoverage 1 lowCoverage 0.558468 0.0434202 0.5114124 4 0.475293 0.0936261 0.3816664 2.4145e-29 1.0000e+00 lowCoverage 2.4145e-27 1.0000e+00 lowCoverage 1.1153e-11 1.0000e+00 lowCoverage 1.8588e-09 1.0000e+00 lowCoverage 0.38567924 3.7189e-08 lowCoverage 4.1322e-06 lowCoverage 0.559127 0.2689655 0.3065439 4 0.475293 0.264053 0.2112398 2.0647e-11 9.9672e-01 lowCoverage 2.2941e-09 1.0000e+00 lowCoverage 2.7402e-06 9.9794e-01 lowCoverage 2.2835e-04 1.0000000 lowCoverage 0.1935134 2.2356e-03 lowCoverage 0.1117784 lowCoverage 0.573983 0.0434202 0.5349663 6 0.442293 0.0936261 0.34866644 2.6425e-25 1.0000e+00 hypermethylated 3.7750e-23 1.0000e+00 hypermethylated 5.1440e-10 1.0000e+00 hypermethylated 7.3486e-08 1.0000e+00 hypermethylated 0.3171237 2.3663e-05 lowCoverage 1.5775e-03 lowCoverage 0.576894 0.2689655 0.34184272 4 0.435714 0.264053 0.1716609 2.2284e-09 9.9469e-01 lowCoverage 1.9977e-07 1.0000e+00 lowCoverage 2.3048e-04 9.9849e-01 lowCoverage 1.6463e-02 1.0000e+00 lowCoverage 0.12495784 4.3656e-02 lowCoverage 1.000000 lowCoverage 0.0434783 0.2692750 -0.21300093 4 0.1070013 0.301775 -0.19477327 1.0000e+00 2.6362e-09 lowCoverage 1.0000e+00 2.0278e-07 lowCoverage 1.0000e+00 1.0609e-05 lowCoverage 1.0000000 1.0609e-03 lowCoverage -0.1921658 2.5119e-03 lowCoverage 0.1477586 lowCoverage chr15 38531850 38532850 46564 BAHD1 ENSG00000140320 0.7082020 163 5 0.6352761 210 5 0.633868 128 4 0.6901905 182 5 0.7395833 77 4 0.729260 254 5 0.6526509 90 5 0.7710084 128 5 0.6835317 101 4 0.7619244 114 3 0.762578 245 5 0.4190476 47 3 0.5796737 230 4 0.5070603 112 4 0.7055806 184 4 0.3750000 17 1 0.6250000 7 0 0.7723188 186 5 0.713476 179 5 0.588312 167 5 0.709019 49 4 0.468000 84 3 0.751758 126 5 0.5854867 109 5 0.8696172 42 3 0.6064958 312 5 0.717089 127 5 0.573160 57 5 0.642367 188 5 0.5638333 337 5 0.6307430 286 5 0.729801 200 5 0.7616390 197 5 0.7732143 108 4 0.8000000 121 4 0.592593 24 3 0.7877336 116 5 0.8768097 197 5 0.686724 184 5 0.7123865 164 5 0.7365086 142 5 0.6589744 133 5 0.687974 151 5 0.793278 0.6982541 0.7379473 0.7666443 0.7271127 0.712633 0.774390 0.8356791 0.7660407 0.7997773 0.829823 0.674491 0.5918138 0.746601 0.7862801 0.4890007 0.8434608 0.8154283 0.718653 0.6396109 0.794728 0.7644131 0.836862 0.6500115 0.8147463 0.8174090 0.750062 0.726439 0.752269 0.7395201 0.8190634 0.830273 0.7935011 0.7021095 0.7394413 0.5017080 0.7326464 0.9271732 0.797300 0.7412489 0.84076126 0.7513285 0.8354233 3 0.709929 0.727700 -0.02635066 5 0.686022 0.640891 0.04513076 3.3017e-01 0.21452227 insignificant 1.000000 1.000000 insignificant 0.48988855 0.3382429 insignificant 1.00000 1 insignificant -0.00127051 0.9748231 lowCoverage 1 lowCoverage 0.709929 0.7929227 -0.0860847 5 0.686022 0.8441341 -0.1581124 9.8962e-01 2.0757e-06 weaklyHypometh 1.0000e+00 2.5946e-04 weaklyHypometh 9.8596e-01 1.9509e-03 weaklyHypometh 1.0000e+00 1.9509e-01 insignificant -0.11265445 3.4391e-02 lowCoverage 5.8290e-01 lowCoverage 0.709929 0.7906977 -0.0459474 5 0.686022 0.616409 0.0696128 4.7947e-01 1.8676e-02 weaklyHypometh 1.0000e+00 6.9170e-01 insignificant 7.8352e-01 5.0507e-02 insignificant 1.0000e+00 1.0000000 insignificant -0.0438363 1.3657e-01 lowCoverage 1.0000000 lowCoverage 0.727700 0.7929227 -0.0735208 5 0.640891 0.8441341 -0.20324320 9.4759e-01 2.3665e-06 weaklyHypometh 1.0000e+00 3.3807e-04 weaklyHypometh 9.7560e-01 4.7063e-03 weaklyHypometh 1.0000e+00 3.9719e-01 insignificant -0.1113839 4.3968e-02 lowCoverage 7.7138e-01 lowCoverage 0.727700 0.7906977 -0.01395432 5 0.640891 0.616409 0.0244820 7.6549e-01 9.2058e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 8.3991e-01 6.6457e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04256584 2.2476e-01 lowCoverage 1.000000 lowCoverage 0.7929227 0.7906977 0.00805835 5 0.8441341 0.616409 0.22772523 1.2388e-01 6.4414e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.6479e-02 8.1739e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.0688181 1.3907e-01 lowCoverage 1.0000000 lowCoverage chr15 38585950 38586950 46568 ENSG00000214089 0.0518926 132 4 0.0753912 155 6 0.029167 202 6 0.0308642 176 4 0.0344792 133 6 0.082948 278 6 0.0329678 82 6 0.0451389 135 6 0.0064103 267 6 0.0179050 352 6 0.018710 165 6 0.0222052 230 6 0.0314716 164 6 0.0120664 163 3 0.0119749 328 6 0.0268519 260 6 0.0277778 36 4 0.1827193 174 6 0.015793 125 6 0.258333 144 6 0.061012 56 5 0.050866 180 6 0.045549 102 6 0.0815101 150 6 0.0792824 114 4 0.0119354 243 6 0.057802 229 6 0.031295 197 7 0.095299 89 4 0.0101199 229 6 0.0161638 128 6 0.063690 128 6 0.0366713 139 6 0.0083333 63 3 0.0057143 102 3 0.018519 56 3 0.1233334 166 6 0.0192652 128 6 0.150433 194 6 0.0555556 127 6 0.0000000 135 3 0.0052632 116 3 0.000000 107 3 0.016570 0.0304864 0.0195266 0.0107933 0.0387047 0.019739 0.050422 0.0080128 0.0120240 0.0291697 0.012102 0.041382 0.0232752 0.029813 0.0221704 0.0191157 0.0507890 0.0463888 0.029150 0.0019724 0.057868 0.0079536 0.043974 0.0454944 0.0225797 0.0169271 0.035736 0.013069 0.027500 0.0067444 0.0123572 0.041399 0.0349684 0.0152367 0.0123082 0.0213477 0.0137023 0.0122956 0.016250 0.0098619 0.00328731 0.0116180 0.0000000 3 0.027560 0.036314 -0.00368892 6 0.087249 0.035978 0.05127027 2.9075e-01 0.08932677 insignificant 1.000000 1.000000 insignificant 0.35904763 0.0409618 weaklyHypometh 1.00000 1 insignificant 0.00037629 0.9816197 insignificant 1 insignificant 0.027560 0.0366972 -0.0062092 6 0.087249 0.0820984 0.0051502 5.1438e-01 2.5667e-03 weaklyHypometh 1.0000e+00 1.6042e-01 insignificant 5.7140e-01 2.7886e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01544733 5.1342e-01 lowCoverage 1.0000e+00 lowCoverage 0.027560 0.0117820 0.0143257 3 0.087249 0.082739 0.0045097 1.0583e-01 9.7767e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.3620e-02 9.9757e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 0.0085030 8.0050e-01 lowCoverage 1.0000000 lowCoverage 0.036314 0.0366972 -0.0016326 6 0.035978 0.0820984 -0.04612007 8.9194e-01 2.1910e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.7759e-01 7.6798e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0150710 4.7356e-01 lowCoverage 1.0000e+00 lowCoverage 0.036314 0.0117820 0.01245006 3 0.035978 0.082739 -0.0467606 2.9000e-01 8.7176e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 1.1392e-01 9.7663e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.00812674 7.9893e-01 lowCoverage 1.000000 lowCoverage 0.0366972 0.0117820 0.01093901 3 0.0820984 0.082739 -0.00064051 9.2624e-02 9.9306e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 3.7271e-01 9.9743e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage -0.0069443 8.4502e-01 lowCoverage 1.0000000 lowCoverage chr15 38591050 38592050 46569 ENSG00000214089 0.0086574 734 14 0.0071549 286 11 0.047350 316 11 0.0029297 1170 14 0.0058651 266 11 0.173131 835 11 0.0196726 372 11 0.0043891 445 11 0.0050000 794 11 0.0152479 695 11 0.019759 332 11 0.0214351 608 11 0.0094009 637 11 0.0058448 461 11 0.0047874 640 11 0.0032167 605 11 0.0020833 354 11 0.0050461 856 14 0.041403 136 11 0.076702 390 11 0.026118 163 11 0.009298 510 11 0.080423 277 11 0.0077786 321 11 0.0095321 337 11 0.0151162 532 11 0.094456 484 11 0.034677 273 11 0.023769 293 11 0.0110294 516 11 0.0130651 424 11 0.049634 591 11 0.0091954 295 11 0.0109428 217 11 0.1818182 31 0 0.000000 176 11 0.0360983 245 11 0.0025253 354 11 0.090609 803 14 0.0057662 527 14 0.0837220 731 14 0.0038491 566 14 0.041114 671 14 0.018167 0.0092072 0.0447753 0.0039217 0.0081551 0.028502 0.022283 0.0047534 0.0064546 0.0165444 0.021654 0.020586 0.0093881 0.005055 0.0046598 0.0036467 0.0026217 0.0074147 0.045938 0.0169382 0.034312 0.0116793 0.015869 0.0086888 0.0108957 0.0143911 0.012235 0.040262 0.028282 0.0131775 0.0146311 0.020233 0.0112037 0.0137328 0.2321785 0.0000000 0.0129037 0.0020145 0.013232 0.0092332 0.08479569 0.0069423 0.0136622 11 0.011986 0.017176 -0.00462375 11 0.069761 0.044407 0.02535328 1.0000e+00 0.76932105 insignificant 1.000000 1.000000 insignificant 0.99999571 0.8727043 insignificant 1.00000 1 insignificant -0.00728753 0.5569156 insignificant 1 insignificant 0.011919 0.0091324 0.0031604 11 0.010970 0.0080508 0.0029193 1.7657e-01 9.7291e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.6465e-02 9.9855e-01 weaklyHypermeth 4.0715e-01 1.0000e+00 insignificant -0.01614280 6.1190e-01 insignificant 1.0000e+00 insignificant 0.011912 0.0279465 -0.0161229 11 0.027351 0.022738 0.0046135 1.0000e+00 5.8539e-03 weaklyHypometh 1.0000e+00 3.8348e-01 insignificant 9.9977e-01 5.9771e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0210583 3.4418e-01 insignificant 1.0000000 insignificant 0.017252 0.0098634 0.0080224 11 0.048754 0.0307102 0.01804378 5.2233e-02 9.9865e-01 insignificant 4.7057e-01 1.0000e+00 insignificant 2.4102e-02 9.9989e-01 weaklyHypermeth 3.5626e-01 1.0000e+00 insignificant -0.0088553 7.7822e-01 insignificant 1.0000e+00 insignificant 0.017245 0.0279550 -0.01072645 11 0.058285 0.024159 0.0341257 9.8948e-01 3.8710e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6335e-01 9.5081e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01377078 5.2397e-01 insignificant 1.000000 insignificant 0.0091463 0.0280702 -0.01884318 11 0.0087827 0.027719 -0.01893656 9.9960e-01 4.9372e-03 weaklyHypometh 1.0000e+00 8.0938e-02 weaklyHypometh 9.9972e-01 8.5904e-03 weaklyHypometh 1.0000000 2.0952e-01 insignificant -0.0049155 8.8930e-01 insignificant 1.0000000 insignificant chr15 39328650 39329650 46585 ENSG00000198207 0.7682906 76 6 0.6605342 90 5 0.636364 38 3 0.6732243 108 6 0.7500000 39 4 0.669192 96 5 0.5408730 41 4 0.8095238 60 5 0.8163265 23 1 0.8027211 26 2 0.799129 120 6 0.6416667 20 1 0.7202381 46 4 0.6050926 33 4 0.7243056 41 4 0.5714286 7 1 0.6805556 42 1 0.6832612 62 4 0.555556 23 2 0.727472 72 5 0.711111 29 4 0.833333 12 0 0.599359 54 4 0.8888889 28 3 0.8916667 30 4 0.5824830 95 5 0.916667 14 0 0.866667 18 2 0.777778 26 2 0.7679198 93 6 0.6561224 87 5 0.641870 103 6 0.7263431 75 6 0.7121212 42 3 0.7551020 116 6 0.796296 44 2 0.7546296 46 5 0.6601957 102 5 0.750000 74 6 0.7559524 113 6 0.8443627 64 5 0.6500000 29 2 0.661912 111 6 0.737641 0.6174744 0.5636364 0.6231265 0.7000000 0.603030 0.557222 0.7333333 0.7428571 0.7238095 0.726484 0.699388 0.7392857 0.576111 0.7654989 NA 0.7304989 0.6087011 0.466667 0.6937560 0.693333 0.8000000 0.534615 0.8666667 0.8700000 0.6202381 0.900000 0.840000 0.688889 0.6884211 0.7485714 0.585122 0.6941392 0.6878788 0.6571429 0.7611111 0.7305556 0.6483902 0.700000 0.7071429 0.81911765 0.6600000 0.6013136 0 0.740357 0.787776 -0.03088502 6 0.742744 0.733141 0.00960269 8.6866e-01 0.19474573 insignificant 1.000000 1.000000 insignificant 0.91733185 0.1987450 insignificant 1.00000 1 insignificant -0.06936774 0.0976083 lowCoverage 1 lowCoverage 0.740357 0.7576471 0.0029631 6 0.742744 0.7581730 -0.0154292 6.0740e-01 2.7923e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.1423e-01 6.4946e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04232697 1.3370e-01 lowCoverage 1.0000e+00 lowCoverage 0.738841 0.7979540 -0.0248130 6 0.716534 0.740295 -0.0237608 9.0407e-01 1.5888e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3463e-01 3.6606e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0406576 3.4816e-01 lowCoverage 1.0000000 lowCoverage 0.787776 0.7576471 0.0344630 6 0.733141 0.7581730 -0.02503188 4.2329e-01 7.8668e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.0454e-01 9.5670e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0270408 5.0510e-01 lowCoverage 1.0000e+00 lowCoverage 0.789384 0.7979540 0.00664590 6 0.755331 0.740295 0.0150360 6.9681e-01 5.7341e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.7086e-01 8.2217e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02871009 5.7463e-01 lowCoverage 1.000000 lowCoverage 0.7570755 0.7979540 -0.03196908 6 0.7178685 0.740295 -0.02242677 8.4133e-01 4.9226e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.4106e-01 6.5653e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.0016693 9.6818e-01 lowCoverage 1.0000000 lowCoverage chr15 39488650 39489650 46587 NDUFAF1 ENSG00000137806 0.5794087 206 7 0.6550662 159 7 0.641072 103 7 0.6332080 206 7 0.5747475 88 7 0.597413 324 7 0.4852273 104 7 0.6382168 135 7 0.3901712 77 7 0.7134165 74 6 0.489313 233 7 0.3875000 41 2 0.7079615 105 7 0.8750000 26 3 0.6343915 80 6 0.5000000 39 2 0.6345654 45 6 0.7836735 144 7 0.764432 122 7 0.672885 253 7 0.636364 62 7 0.707814 99 7 0.628073 110 7 0.7397877 93 7 0.7506002 80 6 0.7062947 160 7 0.744878 101 7 0.510000 46 3 0.442995 112 7 0.4697017 176 7 0.6808031 197 7 0.566118 325 8 0.5458682 130 7 0.5141189 126 7 0.5515640 144 7 0.501832 38 2 0.5095728 134 7 0.5931220 179 7 0.716661 152 7 0.6966627 181 7 0.7550090 176 7 0.7439619 131 7 0.629311 166 7 0.654266 0.6657962 0.6444223 0.7312145 0.7207530 0.724878 0.598169 0.7187398 0.5409107 0.7486385 0.678180 0.482008 0.6913913 0.800206 0.7253608 0.5951178 0.6741664 0.8159452 0.768660 0.7278120 0.776936 0.7158643 0.646038 0.7112576 0.7754034 0.7532027 0.743062 0.681481 0.667977 0.7326634 0.7145399 0.716994 0.6438568 0.5541943 0.5827145 0.5826211 0.7157624 0.6737871 0.740960 0.7464115 0.75740767 0.7506991 0.7312713 3 0.692668 0.712364 -0.01325764 7 0.583030 0.571742 0.01128730 4.5907e-01 0.34862172 insignificant 1.000000 1.000000 insignificant 0.68094565 0.3748253 insignificant 1.00000 1 insignificant -0.01406895 0.7420063 insignificant 1 insignificant 0.692668 0.6284953 0.0615065 7 0.583030 0.4762975 0.1067321 3.8800e-03 9.9715e-01 weaklyHypermeth 4.6747e-02 1.0000e+00 weaklyHypermeth 7.2084e-02 9.9249e-01 insignificant 8.6848e-01 1.0000e+00 insignificant 0.08187051 1.4944e-02 weaklyHypermeth 3.1134e-01 insignificant 0.694510 0.7394541 -0.0481986 7 0.628802 0.705279 -0.0764768 9.9295e-01 7.5771e-03 weaklyHypometh 1.0000e+00 4.4571e-01 insignificant 9.9419e-01 3.1039e-02 weaklyHypometh 1.0000e+00 0.9405902 insignificant -0.0904376 2.1061e-02 weaklyHypometh 0.5136800 insignificant 0.712364 0.6284953 0.0761422 7 0.571742 0.4762975 0.09544481 2.2191e-03 9.9799e-01 weaklyHypermeth 2.8820e-02 1.0000e+00 weaklyHypermeth 1.5634e-02 9.9861e-01 weaklyHypermeth 2.5216e-01 1.0000e+00 insignificant 0.0959395 1.4960e-02 weaklyHypermeth 3.2522e-01 insignificant 0.713548 0.7394541 -0.03554880 7 0.568234 0.705279 -0.1370453 9.9820e-01 1.5327e-02 weaklyHypometh 1.0000e+00 7.4820e-01 insignificant 9.9519e-01 5.0540e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.07636867 6.8185e-02 insignificant 1.000000 insignificant 0.6308725 0.7394541 -0.11138636 7 0.5315570 0.705279 -0.17372196 9.9989e-01 2.1968e-05 weaklyHypometh 1.0000e+00 7.0863e-04 weaklyHypometh 9.9988e-01 4.2217e-04 weaklyHypometh 1.0000000 3.0155e-02 weaklyHypometh -0.1723081 3.2958e-04 weaklyHypometh 0.0470825 weaklyHypometh chr15 41201850 41202850 46611 UBR1 ENSG00000159459 0.0189270 177 12 0.0047847 254 11 0.027778 129 11 0.0053476 167 5 0.0918367 195 12 0.051653 243 9 0.1095238 229 12 0.0454545 156 11 0.0454545 127 9 0.0069444 117 7 0.021953 264 12 0.0228355 187 9 0.0064103 105 7 0.0555556 31 3 0.0303030 131 11 0.0000000 135 10 0.0000000 85 7 0.0207393 173 6 0.022917 154 12 0.038571 243 12 0.032967 43 3 0.000000 18 0 0.010417 118 12 0.0979243 75 8 0.0200187 260 6 0.0272223 302 12 0.030769 113 7 0.130952 29 2 0.000000 115 11 0.0048077 285 12 0.0072464 267 12 0.017036 254 12 0.0000000 163 12 0.0000000 172 12 0.0000000 52 2 0.000000 51 3 0.0054945 144 7 0.0152927 232 12 0.092363 317 9 0.0238095 236 10 0.0039526 202 5 0.0259740 58 8 0.018585 208 6 0.026826 0.0062163 0.0393701 0.0069477 0.0337458 0.052076 0.062992 0.0590551 0.0590551 0.0032808 0.031115 0.032161 0.0030285 0.040907 0.0393701 0.0000000 0.0280409 0.0293943 0.020013 0.0368333 0.050619 0.0269791 0.014764 0.1418073 0.0307374 0.0404684 0.047244 0.038316 0.000000 0.0107511 0.0102705 0.019513 0.0000000 0.0000000 NA 0.0000000 0.0084364 0.0138171 0.018982 0.0309336 0.00513523 0.0337458 0.0263405 1 0.024833 0.026652 -0.00011535 11 0.084491 0.085178 -0.00068660 8.8385e-01 0.98413084 insignificant 1.000000 1.000000 insignificant 0.71069929 0.9910973 insignificant 1.00000 1 insignificant -0.00026393 0.9846187 insignificant 1 insignificant 0.024264 0.0049200 0.0241155 11 0.022280 0.0059681 0.0163122 5.1878e-02 9.2578e-01 insignificant 4.8035e-01 1.0000e+00 insignificant 1.5381e-01 9.9425e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02788491 5.9757e-04 weaklyHypermeth 2.8456e-02 weaklyHypermeth 0.024257 0.0333007 0.0064555 5 0.020566 0.092243 -0.0716768 4.5082e-01 9.9926e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.7386e-01 9.8973e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0015872 9.2755e-01 insignificant 1.0000000 insignificant 0.026245 0.0049200 0.0233580 12 0.023139 0.0059681 0.01717044 4.6886e-01 9.9537e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.0676e-01 9.9929e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0281488 3.7997e-02 weaklyHypermeth 6.9086e-01 insignificant 0.026767 0.0333007 0.00547050 6 0.098282 0.092243 0.0060385 9.2436e-01 8.9133e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.2803e-01 9.8512e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00132332 9.4700e-01 insignificant 1.000000 insignificant 0.0049200 0.0323529 -0.02030636 6 0.0059681 0.016597 -0.01062873 9.4699e-01 3.0181e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9639e-01 6.6077e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.0294722 1.2729e-01 insignificant 1.0000000 insignificant chr15 43535150 43536150 46658 ENSG00000210716 0.7957202 77 5 0.7859307 79 6 0.757143 23 2 0.8818182 53 5 0.6742424 54 4 0.778741 53 5 0.6527778 29 1 0.8124183 49 5 0.7361111 25 1 1.0000000 9 0 0.580003 83 5 0.4464286 13 1 0.7886905 45 6 0.7546296 46 6 0.6746032 36 6 1.0000000 5 0 0.5000000 58 1 0.7004015 47 4 0.857143 27 3 0.855556 30 3 0.800000 14 2 NA 0 0 0.780303 58 6 0.6000000 7 0 0.8333333 12 0 0.7494048 80 6 0.444444 10 0 1.000000 2 0 0.737554 48 4 0.8608127 66 5 0.9107143 63 5 0.917379 52 5 0.5930033 80 6 0.7603175 38 5 0.7797619 87 6 0.900000 7 0 0.6075036 52 5 0.8383117 48 5 0.744474 77 5 0.7936869 47 5 0.7660317 56 5 0.5666667 14 0 0.787222 58 5 0.796569 0.8666667 0.8888889 0.9696970 0.5151515 0.958333 0.555556 0.8000000 0.8888889 NA 0.674292 0.500000 0.7142857 0.666667 0.5555556 1.0000000 NA 0.7492877 1.000000 0.8703704 0.800000 NA 0.727273 0.3333333 0.7777778 0.7083333 0.333333 0.825611 0.856061 0.8690476 0.9047619 0.962963 0.6418989 0.7857143 0.6666667 1.0000000 0.7407407 0.9166667 0.815789 0.8379630 0.81481481 0.5000000 0.8148148 0 0.777646 0.796117 -0.03519002 5 0.739194 0.831530 -0.09233584 9.7520e-01 0.08815799 insignificant 1.000000 1.000000 insignificant 0.88114104 0.1075588 insignificant 1.00000 1 insignificant -0.03328625 0.5631847 lowCoverage 1 lowCoverage 0.777646 0.7051282 0.0600664 5 0.739194 0.7021651 0.0370291 1.2860e-01 8.8216e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.8327e-01 6.8132e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00513490 9.3308e-01 lowCoverage 1.0000e+00 lowCoverage 0.754690 0.7619048 -0.0112233 5 0.752263 0.763036 -0.0107726 7.4445e-01 5.8776e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.9913e-01 8.6778e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0200017 7.1303e-01 lowCoverage 1.0000000 lowCoverage 0.796117 0.7051282 0.0921836 5 0.831530 0.7021651 0.12936499 2.1858e-02 9.9732e-01 weaklyHypermeth 2.2768e-01 1.0000e+00 insignificant 1.8744e-01 9.8862e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0384212 5.8636e-01 lowCoverage 1.0000e+00 lowCoverage 0.790281 0.7619048 0.02593445 5 0.786364 0.763036 0.0233285 2.4700e-01 8.8694e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.0454e-01 9.2585e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.05328791 4.1379e-01 lowCoverage 1.000000 lowCoverage 0.7007042 0.7619048 -0.06335960 5 0.6976979 0.763036 -0.06533801 9.2233e-01 1.9587e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.5595e-01 6.1987e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.0148668 8.2601e-01 lowCoverage 1.0000000 lowCoverage chr15 48483350 48484350 46733 GABPB1 ENSG00000104064 0.5800564 392 12 0.6437256 523 12 0.568525 316 8 0.6419449 310 10 0.6747543 287 12 0.504134 402 12 0.5718843 362 11 0.5504019 394 11 0.5190710 281 9 0.6593953 310 8 0.628032 530 12 0.4527529 162 7 0.6366040 380 11 0.7253456 191 11 0.7061494 400 9 0.4561312 136 7 0.4537221 281 7 0.5553148 326 10 0.564042 322 9 0.557237 304 11 0.503375 111 7 0.495692 115 8 0.536531 233 8 0.6287286 154 11 0.5276832 128 6 0.6340286 534 12 0.600361 186 10 0.699091 121 6 0.575079 325 10 0.5978128 585 11 0.6338641 517 12 0.545268 429 11 0.5053025 424 11 0.5126534 248 9 0.4496227 256 10 0.773990 78 6 0.5444785 185 12 0.6009103 497 11 0.613403 313 12 0.5928671 297 10 0.6455410 277 11 0.6682858 242 7 0.620572 258 12 0.593154 0.6104175 0.5863814 0.7029423 0.6102997 0.584446 0.546177 0.6231018 0.5656510 0.6368839 0.602004 0.539590 0.6445916 0.744156 0.6489746 0.4758836 0.4246866 0.6522853 0.647469 0.5483639 0.548186 0.5708024 0.585071 0.5994312 0.7126016 0.5821483 0.614883 0.620492 0.653455 0.6553278 0.6228131 0.521395 0.4678045 0.5378830 0.5677662 0.7288219 0.5892152 0.5744517 0.622044 0.7094652 0.71783124 0.6388468 0.6356292 6 0.610228 0.625073 -0.00332145 11 0.529883 0.520585 0.00929807 5.1491e-01 0.43105145 insignificant 1.000000 1.000000 insignificant 0.37959055 0.2251210 insignificant 1.00000 1 insignificant 0.00100172 0.9688537 insignificant 1 insignificant 0.610447 0.5367299 0.0789800 11 0.585762 0.5369282 0.0488340 3.0762e-08 9.9800e-01 weaklyHypermeth 8.3139e-07 1.0000e+00 weaklyHypermeth 3.6910e-02 9.7812e-01 weaklyHypermeth 5.1265e-01 1.0000e+00 insignificant 0.01796829 7.3033e-01 insignificant 1.0000e+00 insignificant 0.610884 0.6986301 -0.0491032 10 0.613742 0.626940 -0.0131974 9.2156e-01 1.4458e-02 weaklyHypometh 1.0000e+00 6.0242e-01 insignificant 9.4100e-01 1.6531e-02 weaklyHypometh 1.0000e+00 0.7255143 insignificant -0.0456725 5.5225e-02 insignificant 0.8907289 insignificant 0.626313 0.5367299 0.0847807 11 0.569905 0.5369282 0.03297728 9.5042e-07 9.9934e-01 weaklyHypermeth 2.5011e-05 1.0000e+00 weaklyHypermeth 1.3509e-02 8.9262e-01 weaklyHypermeth 2.3291e-01 1.0000e+00 insignificant 0.0169666 7.4427e-01 insignificant 1.0000e+00 insignificant 0.626861 0.6986301 -0.04787917 9 0.617398 0.626940 -0.0095422 9.0105e-01 2.7437e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.0651e-01 1.5374e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.04667423 5.2693e-02 insignificant 1.000000 insignificant 0.5364552 0.6986301 -0.12968968 9 0.4983389 0.626940 -0.12860094 1.0000e+00 4.1332e-06 weaklyHypometh 1.0000e+00 1.6533e-04 weaklyHypometh 9.9951e-01 3.2830e-03 weaklyHypometh 1.0000000 9.6559e-02 weaklyHypometh -0.0636408 2.3795e-01 insignificant 1.0000000 insignificant chr15 49330550 49331550 46749 CYP19A1 ENSG00000137869 0.9138853 208 5 0.8676270 249 6 0.812856 249 6 0.9166667 42 3 0.8359509 82 4 0.879178 159 6 0.8892424 121 4 0.8975226 138 4 0.8794338 144 4 0.8684002 80 4 0.906961 148 4 0.8012955 91 4 0.8783978 119 4 NA 0 0 0.9265334 100 4 0.7924370 44 4 0.7373716 88 4 0.9833333 81 4 0.926833 78 4 0.916750 152 5 0.853896 60 4 0.965278 50 4 0.895434 179 6 0.8986842 52 4 0.8187500 22 3 0.9227916 261 6 0.887134 66 4 0.925000 52 4 0.864031 118 4 0.9360820 299 6 0.8505018 234 6 0.911073 216 4 0.8789696 235 6 0.7594592 110 4 0.8870968 95 5 0.858553 56 4 0.8997070 78 4 0.8549957 171 6 0.959731 157 4 0.9779385 155 4 0.9527530 65 4 0.9434970 183 5 0.897233 135 6 0.926055 0.8413618 0.7065869 0.9180328 0.8570688 0.917037 0.880838 0.9035026 0.8925755 0.8823858 0.914449 0.805521 0.8776265 NA 0.9194587 0.8284888 0.7607599 0.9579235 0.926431 0.9267619 0.843482 0.9602307 0.865726 0.9301122 0.8206284 0.9306711 0.895054 0.944262 0.858360 0.9371118 0.7735704 0.838294 0.8495012 0.7461225 1.0000000 0.8685888 0.8863100 0.7473035 0.926958 0.9547615 0.93943534 0.8945759 0.9175124 4 0.878213 0.886265 -0.00337684 5 0.888669 0.894809 -0.00613956 6.7319e-01 0.21281141 insignificant 1.000000 1.000000 insignificant 0.90881603 0.2831336 insignificant 1.00000 1 insignificant -0.01875597 0.3042886 lowCoverage 1 lowCoverage 0.878213 0.8255034 0.0557153 5 0.888669 0.8213045 0.0673649 2.5406e-02 8.4162e-01 weaklyHypermeth 2.5663e-01 1.0000e+00 insignificant 4.4993e-01 4.9564e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01883519 4.6096e-01 lowCoverage 1.0000e+00 lowCoverage 0.878213 0.9179856 -0.0427802 4 0.888669 0.940836 -0.0521663 9.7834e-01 3.0937e-04 lowCoverage 1.0000e+00 4.4196e-02 lowCoverage 9.5124e-01 1.5243e-03 lowCoverage 1.0000e+00 0.1807703 lowCoverage -0.0709318 2.4973e-03 lowCoverage 0.1135123 lowCoverage 0.886265 0.8255034 0.0612945 6 0.894809 0.8213045 0.07350444 4.1936e-02 6.3549e-01 weaklyHypermeth 3.9193e-01 1.0000e+00 insignificant 3.9850e-01 6.5023e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0375912 1.5128e-01 lowCoverage 1.0000e+00 lowCoverage 0.886265 0.9179856 -0.05104766 4 0.894809 0.940836 -0.0460267 9.9070e-01 4.4488e-03 lowCoverage 1.0000e+00 4.0444e-01 lowCoverage 9.7040e-01 2.3030e-03 lowCoverage 1.0000e+00 3.8384e-01 lowCoverage -0.05217581 1.5455e-02 lowCoverage 0.735935 lowCoverage 0.8255034 0.9179856 -0.11380366 4 0.8213045 0.940836 -0.11953115 9.9123e-01 7.6095e-04 lowCoverage 1.0000e+00 1.6542e-02 lowCoverage 9.9805e-01 9.1778e-03 lowCoverage 1.0000000 2.1852e-01 lowCoverage -0.0897670 6.1390e-03 lowCoverage 0.2669655 lowCoverage chr15 51819150 51820150 46789 ENSG00000210932 0.8235780 353 10 0.6083153 108 10 0.606566 67 3 0.6491402 141 10 0.7038095 58 6 0.738839 269 10 0.6117517 105 10 0.7255342 64 7 0.5630882 129 9 0.5630339 108 8 0.782493 192 10 0.6509211 82 7 0.5834038 184 10 0.4212121 48 4 0.6590278 112 7 0.5777778 58 7 0.7159560 151 9 0.7209826 148 9 0.630889 72 3 0.776683 219 10 0.631944 29 1 0.801587 50 6 0.693443 116 7 0.7909091 42 5 0.8583333 43 3 0.6811413 187 10 0.733333 30 2 0.500000 44 3 0.553333 82 7 0.6655081 145 7 0.5938323 170 10 0.777192 312 10 0.5972527 112 6 0.6548585 91 7 0.5681061 150 10 0.686177 125 10 0.6750000 56 4 0.8105758 112 7 0.852108 271 10 0.7087331 270 10 0.7019124 310 10 0.7609509 223 7 0.684430 278 10 0.837069 0.7598639 0.7605343 0.7944397 0.7700761 0.757612 0.752332 0.7796048 0.6621185 0.6898433 0.852269 0.654613 0.7045609 0.644397 0.7625740 0.6465671 0.7234432 0.7662769 0.762608 0.8080957 0.739645 0.7891477 0.768900 0.9130178 0.9038462 0.7673586 0.816568 0.622922 0.714286 0.7654156 0.7641458 0.786451 0.6571407 0.6493812 0.6525258 0.6995449 0.7009862 0.7982249 0.839442 0.8470605 0.85712265 0.8431465 0.8254319 3 0.711769 0.751200 -0.02521836 7 0.646954 0.682651 -0.03569759 9.5640e-01 0.04297967 weaklyHypometh 1.000000 1.000000 insignificant 0.96198113 0.0079485 weaklyHypometh 1.00000 1 insignificant -0.03439649 0.3726258 insignificant 1 insignificant 0.711769 0.6625387 0.0676837 10 0.646954 0.6097471 0.0372064 1.5262e-02 9.3577e-01 weaklyHypermeth 1.6411e-01 1.0000e+00 insignificant 2.6524e-01 8.5297e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00967826 8.1669e-01 insignificant 1.0000e+00 insignificant 0.711769 0.8247041 -0.0916657 10 0.646954 0.697435 -0.0504815 7.7439e-01 3.9170e-04 weaklyHypometh 1.0000e+00 4.8962e-02 weaklyHypometh 9.6988e-01 8.6345e-04 weaklyHypometh 1.0000e+00 0.1726893 insignificant -0.0859769 4.7566e-02 weaklyHypometh 0.8107426 insignificant 0.751200 0.6625387 0.0896666 7 0.682651 0.6097471 0.07290403 7.2998e-04 9.9579e-01 weaklyHypermeth 1.0579e-02 1.0000e+00 weaklyHypermeth 1.9623e-02 9.9040e-01 weaklyHypermeth 3.0660e-01 1.0000e+00 insignificant 0.0247182 6.0469e-01 insignificant 1.0000e+00 insignificant 0.751200 0.8247041 -0.06824583 7 0.682651 0.697435 -0.0147839 9.3157e-01 6.3991e-03 weaklyHypometh 1.0000e+00 4.7263e-01 insignificant 7.2249e-01 4.6764e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.05158040 2.5948e-01 insignificant 1.000000 insignificant 0.6625387 0.8247041 -0.17358708 10 0.6097471 0.697435 -0.08768790 1.0000e+00 3.4080e-08 weaklyHypometh 1.0000e+00 2.4343e-06 weaklyHypometh 9.9735e-01 6.4196e-04 weaklyHypometh 1.0000000 4.0713e-02 weaklyHypometh -0.0762986 1.3185e-01 insignificant 1.0000000 insignificant chr15 54966550 54967550 46827 ENSG00000140238 0.0149587 1281 38 0.0273864 1334 41 0.014663 1509 43 0.0383655 949 21 0.0128358 1017 43 0.044823 1743 40 0.0076375 1936 43 0.0071522 1373 43 0.0036957 1740 42 0.0036944 1884 42 0.025313 1289 43 0.0083957 1802 42 0.0049380 1565 43 0.0131334 432 12 0.0105956 2109 43 0.0065098 1523 39 0.0158827 1423 40 0.0030557 1177 32 0.029738 857 42 0.029899 1406 41 0.040569 411 37 0.031679 823 27 0.039071 1195 37 0.0378961 665 40 0.0196785 503 24 0.0070721 1723 43 0.017160 855 37 0.025935 731 34 0.039939 884 40 0.0111074 1915 43 0.0083144 1617 43 0.021863 1668 44 0.0068148 1065 43 0.0346155 933 42 0.0536425 710 32 0.010054 415 29 0.0316113 570 37 0.0388035 1324 43 0.016478 1571 40 0.0127654 1143 37 0.0020866 1077 34 0.0043865 998 32 0.020239 1128 37 0.013435 0.0128305 0.0064556 0.0158170 0.0039914 0.016907 0.011422 0.0068118 0.0040007 0.0061585 0.012154 0.008384 0.0044032 0.013895 0.0060458 0.0108315 0.0234083 0.0064778 0.012697 0.0173151 0.035328 0.0125200 0.042531 0.0172799 0.0186708 0.0044889 0.014026 0.020127 0.020198 0.0066503 0.0059656 0.017312 0.0069595 0.0054196 0.0066600 0.0053758 0.0115333 0.0125180 0.008889 0.0082683 0.00704170 0.0106004 0.0079334 23 0.010689 0.017013 -0.00433316 43 0.019027 0.022523 -0.00349644 9.9213e-01 0.18668015 insignificant 1.000000 1.000000 insignificant 0.97764806 0.5206011 insignificant 1.00000 1 insignificant -0.00889004 0.0645448 insignificant 1 insignificant 0.010693 0.0169424 -0.0029868 43 0.019440 0.0517154 -0.0322752 6.1487e-01 9.7917e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.3328e-01 9.9900e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01312332 1.3915e-01 insignificant 1.0000e+00 insignificant 0.010691 0.0062532 0.0011774 34 0.019440 0.020582 -0.0011421 3.5520e-01 9.9846e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.3058e-01 9.9924e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.0049425 2.9123e-01 insignificant 1.0000000 insignificant 0.017022 0.0169458 0.0016249 43 0.023524 0.0528646 -0.02934059 6.1572e-01 9.9991e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.2210e-01 1.0000e+00 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0042333 6.1835e-01 insignificant 1.0000e+00 insignificant 0.017018 0.0062542 0.00572352 34 0.023524 0.021040 0.0024844 3.2993e-01 9.8560e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.3078e-01 9.9999e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01383258 1.7560e-02 weaklyHypermeth 0.798193 insignificant 0.0167464 0.0062553 0.00139971 34 0.0306424 0.021040 0.00960272 9.9983e-01 1.0000e+00 insignificant 1.0000e+00 1.0000e+00 insignificant 1.0000e+00 1.0000e+00 insignificant 1.0000000 1.0000e+00 insignificant 0.0180659 5.9846e-02 insignificant 0.8549360 insignificant chr15 56624050 56625050 46893 LIPC ENSG00000166035 0.6376068 59 5 0.5323129 86 5 0.553463 51 4 0.6173401 70 5 0.5033333 41 4 0.581017 144 5 0.2844444 17 2 0.5444444 53 5 0.6570175 41 4 0.5000000 26 5 0.728033 136 5 0.5555556 11 1 0.6894444 59 5 0.6333333 14 1 0.6763636 31 5 0.9166667 6 0 0.5000000 4 0 0.5081494 75 5 0.780345 50 4 0.544903 124 5 0.660000 26 3 0.746667 28 3 0.544737 29 1 0.6879426 40 4 0.6414141 39 4 0.7214831 109 5 0.655368 57 4 0.410000 21 1 0.785210 33 3 0.6212121 121 5 0.6572919 97 5 0.597169 134 5 0.5214097 90 5 0.6305556 42 4 0.6525000 63 5 1.000000 6 0 0.5864286 33 5 0.6672727 68 4 0.300000 24 1 0.6695960 63 5 0.5753997 61 4 0.6250000 13 1 0.705263 51 5 0.597514 0.5006740 0.3792798 0.5390266 0.3020202 0.414300 0.248485 0.3666667 0.5342903 0.2636364 0.596474 0.447913 0.5194444 0.409091 0.4446281 0.7177776 0.3024877 0.3611423 0.673668 0.4251127 0.518182 0.5272727 0.485646 0.5565823 0.3370064 0.6014647 0.558717 0.322727 0.634989 0.4703857 0.5776152 0.500835 0.3673993 0.5138889 0.5750000 1.0000000 0.4824675 0.6228650 0.471745 0.5084022 0.47544906 0.5492071 0.6052632 1 0.574681 0.640327 -0.05507944 5 0.604371 0.652509 -0.04813798 9.6128e-01 0.01712782 weaklyHypometh 1.000000 0.762943 insignificant 0.92713176 0.0580519 insignificant 1.00000 1 insignificant -0.04685253 0.2586093 lowCoverage 1 lowCoverage 0.574681 0.6225166 -0.0414102 5 0.604371 0.6468585 -0.0424875 9.0882e-01 2.4306e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.0025e-01 2.2295e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.07917238 3.2149e-01 lowCoverage 1.0000e+00 lowCoverage 0.574681 0.6084906 -0.0605766 5 0.604371 0.657653 -0.0532822 9.1372e-01 5.0604e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.0506e-01 5.9330e-02 insignificant 1.0000e+00 1.0000000 insignificant 0.0221369 7.8656e-01 lowCoverage 1.0000000 lowCoverage 0.640327 0.6225166 0.0139938 5 0.652509 0.6468585 0.00565050 8.5974e-02 5.5829e-01 insignificant 6.8779e-01 1.0000e+00 insignificant 1.9690e-01 7.7845e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0323199 6.7536e-01 lowCoverage 1.0000e+00 lowCoverage 0.640327 0.6084906 -0.00730321 5 0.652509 0.657653 -0.0051443 5.0173e-01 6.0476e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.7022e-01 5.9048e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.06898947 4.1207e-01 lowCoverage 1.000000 lowCoverage 0.6225166 0.6084906 -0.01263129 5 0.6468585 0.657653 -0.01079476 7.0765e-01 2.3981e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.8183e-01 5.0057e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.1013093 3.3486e-01 lowCoverage 1.0000000 lowCoverage chr15 57311050 57312050 46907 ENSG00000215983 0.9484872 331 7 0.8717967 277 7 0.745994 105 7 0.9504754 352 7 0.9425824 62 7 0.919888 314 7 0.9290353 128 7 0.9627841 147 7 0.9795918 96 6 0.9518654 140 6 0.897732 250 7 0.9642857 60 6 1.0000000 188 7 1.0000000 4 0 0.9222748 135 7 0.9583333 29 5 0.8777778 22 2 0.9198746 400 7 0.939441 117 6 0.933239 279 7 0.921875 43 5 0.945113 125 6 0.931170 284 7 0.8634932 91 7 0.9506370 137 7 0.9368667 355 7 0.875393 130 6 0.905574 57 5 0.914150 188 7 0.9294696 408 7 0.9382534 296 7 0.946413 347 7 0.9458610 247 7 0.9771062 104 7 1.0000000 39 4 0.898509 102 7 0.6993895 119 7 0.9079519 323 7 0.949777 337 7 0.9327378 289 7 0.9602205 350 7 0.9239380 257 6 0.921728 446 7 0.939063 0.8911790 0.8731303 0.9549984 0.9561091 0.931380 0.936448 0.9624060 0.9827586 0.9427305 0.907283 0.963362 1.0000000 0.951009 0.9371665 0.9658740 0.8902993 0.9196157 0.942841 0.9495341 0.903017 0.9369409 0.938594 0.8247220 0.9583658 0.9399363 0.901937 0.889662 0.935063 0.9314673 0.9447168 0.957466 0.9585841 0.9866269 0.9687700 0.8912110 0.9389873 0.9421007 0.964427 0.9455029 0.96897227 0.9301423 0.9245851 6 0.934808 0.941487 -0.00633378 7 0.890682 0.943449 -0.05276699 9.2063e-01 0.10720995 insignificant 1.000000 1.000000 insignificant 0.32618105 0.8424727 insignificant 1.00000 1 insignificant 0.00923894 0.5355964 insignificant 1 insignificant 0.934808 0.9389068 -0.0076879 7 0.890682 0.8701518 0.0205303 8.1183e-01 2.5407e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4855e-01 3.2062e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02596995 5.9156e-01 insignificant 1.0000e+00 insignificant 0.935042 0.9452055 -0.0116277 7 0.922684 0.938382 -0.0156975 9.2447e-01 2.6435e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.5802e-01 7.6235e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.0069074 6.3754e-01 insignificant 1.0000000 insignificant 0.941487 0.9389068 0.0032473 7 0.943449 0.8701518 0.07329733 2.3524e-01 6.4624e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.7281e-01 1.2874e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0167310 7.2306e-01 insignificant 1.0000e+00 insignificant 0.941440 0.9452055 -0.00572741 7 0.935370 0.938382 -0.0030115 4.7801e-01 6.6250e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.6410e-01 5.6490e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01614637 1.6609e-01 insignificant 1.000000 insignificant 0.9398496 0.9452055 -0.00805755 7 0.9230306 0.938382 -0.01535126 3.1316e-01 6.1303e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.9414e-02 9.1050e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.0328774 4.9321e-01 insignificant 1.0000000 insignificant chr15 60975750 60976750 46984 MIR190 ENSG00000211137 0.7678896 440 9 0.6954797 283 9 0.633035 239 9 0.7568375 346 9 0.6133815 123 9 0.787912 495 9 0.6461853 217 9 0.6853489 228 9 0.7912782 261 9 0.7226741 179 9 0.771838 286 9 0.4675726 153 9 0.4439070 305 9 0.7000000 45 5 0.6420336 314 9 0.6221324 100 7 0.5384825 921 9 0.2921625 509 9 0.677711 200 9 0.615970 443 9 0.708716 123 9 0.166161 297 9 0.734962 375 9 0.5705059 133 7 0.6477646 109 9 0.4772630 355 9 0.568438 216 9 0.527708 114 9 0.681677 199 9 0.5616605 393 9 0.7140520 346 9 0.814031 518 9 0.0016584 376 9 0.0258741 175 9 0.0000000 259 5 0.000000 115 9 0.0094986 186 9 0.0016103 449 9 0.172369 691 9 0.1739164 486 9 0.4557977 362 9 0.4899536 397 9 0.264219 483 9 0.785365 0.7089428 0.5761912 0.7512038 0.6601655 0.837342 0.724199 0.7877740 0.7790768 0.7288398 0.760451 0.550877 0.4180635 0.647616 0.6351532 0.6280816 0.7202038 0.3730868 0.680203 0.7186809 0.755232 0.1790354 0.828313 0.6880191 0.6182246 0.5920702 0.620695 0.660051 0.658606 0.5695001 0.7029726 0.814989 0.0034216 0.0244617 0.0066452 0.0000000 0.0149603 0.0015753 0.169589 0.1738582 0.44946038 0.4712102 0.3204874 9 0.714966 0.631844 0.05596037 9 0.579432 0.492508 0.08692428 2.7823e-03 0.99712000 weaklyHypermeth 0.695583 1.000000 insignificant 0.06955600 0.9214339 insignificant 1.00000 1 insignificant 0.04584668 0.4251154 insignificant 1 insignificant 0.714966 0.0051282 0.6812300 9 0.579432 0.0048383 0.5745936 4.2532e-64 1.0000e+00 hypermethylated 2.1266e-61 1.0000e+00 hypermethylated 4.1872e-21 1.0000e+00 hypermethylated 2.0936e-18 1.0000e+00 hypermethylated 0.63715136 2.1128e-15 hypermethylated 1.0564e-12 hypermethylated 0.715391 0.2778007 0.4075244 9 0.586653 0.240829 0.3458242 2.6479e-27 1.0000e+00 hypermethylated 2.6479e-24 1.0000e+00 hypermethylated 8.9989e-13 1.0000e+00 hypermethylated 4.4994e-10 1.0000000 hypermethylated 0.3323405 5.1513e-03 weaklyHypermeth 0.1717100 insignificant 0.631844 0.0051282 0.6262102 9 0.492508 0.0048383 0.48766937 5.7119e-40 1.0000e+00 hypermethylated 2.8560e-37 1.0000e+00 hypermethylated 1.8826e-17 1.0000e+00 hypermethylated 6.2753e-15 1.0000e+00 hypermethylated 0.5913047 8.7356e-08 hypermethylated 1.0919e-05 hypermethylated 0.633892 0.2778007 0.36183809 9 0.519099 0.240829 0.2782704 1.7303e-14 1.0000e+00 hypermethylated 2.8839e-12 1.0000e+00 hypermethylated 3.9343e-08 1.0000e+00 hypermethylated 7.8686e-06 1.0000e+00 hypermethylated 0.28649378 8.5948e-03 weaklyHypermeth 0.477488 insignificant 0.0051348 0.2778007 -0.24605637 9 0.0052782 0.240829 -0.23555073 1.0000e+00 4.5902e-14 hypomethylated 1.0000e+00 6.5574e-12 hypomethylated 1.0000e+00 1.3850e-11 hypomethylated 1.0000000 6.9251e-09 hypomethylated -0.3048109 1.0999e-02 weaklyHypometh 0.3764611 insignificant chr15 61554250 61555250 47027 CA12 ENSG00000074410 0.958333 163 2 0.7698751 98 6 0.870437 67 6 0.892105 130 2 0.869444 30 2 0.904361 244 4 0.821429 71 5 0.7171498 73 3 0.769841 36 1 0.865900 35 1 0.821258 175 6 0.966667 10 1 0.7357143 57 4 0.8981481 31 1 0.687135 54 2 0.8600000 21 1 0.708333 24 2 0.704161 227 3 0.539394 100 2 0.791543 129 2 0.776942 43 4 0.6966667 18 2 0.807666 74 4 0.777679 58 4 0.883626 69 4 0.805556 100 4 0.775181 77 4 0.706667 28 3 0.864510 104 2 0.7753634 122 6 0.9373819 151 6 0.829145 156 5 0.8219759 100 5 0.5421769 88 4 0.7701465 42 3 0.918269 67 2 0.507921 94 5 0.8698078 143 5 0.900196 190 2 0.855325 132 5 0.896380 180 5 0.863252 276 2 0.952126 145 5 0.845588 0.6969218 0.887080 0.872214 0.833578 0.939195 0.799020 0.7748295 0.767157 0.862929 0.830950 0.8764706 0.8348214 0.8762255 0.747420 0.8029412 0.837408 0.815718 0.754011 0.7728228 0.849495 0.7720588 0.880201 0.874081 0.8951453 0.790441 0.799996 0.728922 0.874467 0.822182 0.8972791 0.859127 0.8297595 0.5989496 0.77920942 0.95550259 0.5488766 0.7235392 0.822170 0.768381 0.8373292 0.792462 0.872637 1 0.835779 0.861000 -2.7478e-02 2 0.810607 0.678463 0.1321442 0.8595736 0.29947357 lowCoverage 1.00000 1.00000 lowCoverage 0.444351 0.7321454 lowCoverage 1 1 lowCoverage 0.00452959 0.884255 lowCoverage 1 lowCoverage 0.835686 0.7116105 0.1492635 2 0.783551 0.7540665 0.0294843 1.0454e-05 1.8202e-01 lowCoverage 1.5602e-04 1.0000e+00 lowCoverage 5.3763e-02 7.4688e-01 lowCoverage 5.1695e-01 1.0000e+00 lowCoverage 0.0691786 3.8720e-01 lowCoverage 1.0000e+00 lowCoverage 0.835686 0.790899 0.0284775 2 0.783551 0.895842 -0.11229110 4.6411e-01 1.8319e-02 lowCoverage 1.0000e+00 6.3109e-01 lowCoverage 3.4291e-01 8.8701e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.08589438 0.00817581 lowCoverage 0.302808 lowCoverage 0.861862 0.7116105 1.5560e-01 5 0.775386 0.7540665 0.0213196 6.0557e-05 2.6332e-01 weaklyHypermeth 8.5292e-04 1.0000e+00 weaklyHypermeth 8.8246e-02 4.5607e-01 insignificant 8.1710e-01 1.00000000 insignificant 0.0646490 4.1274e-01 lowCoverage 1.0000e+00 lowCoverage 0.861862 0.790899 0.0369505 4 0.775386 0.895842 -0.1204558 2.2091e-01 2.6946e-02 lowCoverage 1.0000e+00 7.3330e-01 lowCoverage 3.5829e-01 8.2275e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0904240 4.2541e-03 lowCoverage 0.3567205 lowCoverage 0.7116105 0.790899 -0.1353146 4 0.7540665 0.895842 -0.1417754 8.7045e-01 2.3665e-03 lowCoverage 1.0000e+00 2.9581e-02 lowCoverage 9.2400e-01 2.5132e-02 lowCoverage 1.0000e+00 2.9567e-01 lowCoverage -0.15507295 7.9936e-02 lowCoverage 8.4144e-01 lowCoverage chr15 61988750 61989750 47050 MIR422A ENSG00000199156 0.625465 123 5 0.6339799 89 3 0.592262 26 3 0.651087 118 5 0.806349 31 3 0.685432 176 5 0.701058 34 3 0.7514430 44 3 0.500000 6 0 0.777778 7 0 0.848158 137 3 0.666667 5 0 0.6333333 10 1 0.8333333 11 0 0.904762 15 2 0.0000000 4 0 0.616352 219 3 0.401190 73 5 0.933333 16 3 0.531888 141 5 0.734127 23 3 NA 0 0 0.689899 43 5 0.571429 19 2 1.000000 6 0 0.710152 87 3 0.769048 50 3 0.750000 12 0 0.777778 9 1 0.6122954 81 3 0.6583226 89 3 0.690340 157 5 0.0119048 69 3 0.0476190 27 3 0.0000000 135 3 NA 0 0 0.030303 93 3 0.0000000 92 3 0.509701 183 5 0.413821 185 5 0.419111 149 5 0.500000 21 2 0.443487 207 5 0.717893 0.6298491 0.399802 0.767017 0.868254 0.801804 0.691138 0.7339466 0.458333 0.666667 0.852913 0.9166667 0.4916667 0.7708333 0.869048 0.0617066 0.704133 0.562500 0.916667 0.7692901 0.630952 NA 0.861953 0.589286 0.9837530 0.674893 0.733929 0.541667 0.736111 0.830695 0.7259140 0.880234 0.0178571 0.0119048 0.00000000 NA 0.0454545 0.0000000 0.516599 0.373120 0.3444444 0.459498 0.418295 0 0.672897 0.769634 -3.8413e-02 3 0.685194 0.613811 0.0713827 0.8220742 0.54805070 lowCoverage 1.00000 1.00000 lowCoverage 0.835318 0.9124257 lowCoverage 1 1 lowCoverage -0.06925100 0.233179 lowCoverage 1 lowCoverage 0.751572 0.0120192 0.7400811 3 0.750780 0.0115989 0.7391816 5.2595e-27 1.0000e+00 lowCoverage 4.0458e-25 1.0000e+00 lowCoverage 2.9882e-07 1.0000e+00 lowCoverage 1.6601e-05 1.0000e+00 lowCoverage 0.6367282 1.0515e-11 lowCoverage 1.0515e-09 lowCoverage 0.672642 0.464430 0.2142597 5 0.622233 0.453730 0.16850252 1.8436e-07 8.9382e-01 hypermethylated 1.8436e-05 1.0000e+00 hypermethylated 9.8059e-03 9.7328e-01 weaklyHypermeth 4.6694e-01 1.0000e+00 insignificant 0.19746962 0.00064992 lowCoverage 0.064992 lowCoverage 0.791128 0.0120192 7.7909e-01 3 0.794290 0.0115989 0.7826906 5.1971e-27 1.0000e+00 lowCoverage 3.7122e-25 1.0000e+00 lowCoverage 2.8048e-07 1.0000e+00 lowCoverage 1.5582e-05 1.00000000 lowCoverage 0.7059792 2.6916e-10 lowCoverage 5.3831e-08 lowCoverage 0.770578 0.464430 0.3227998 3 0.636574 0.453730 0.1828433 2.5772e-10 6.9154e-01 lowCoverage 3.2214e-08 1.0000e+00 lowCoverage 7.1221e-04 8.3321e-01 lowCoverage 5.4786e-02 1.0000e+00 lowCoverage 0.2667206 8.6457e-06 lowCoverage 0.0086457 lowCoverage 0.0120192 0.462758 -0.4348498 3 0.0115989 0.451133 -0.4395338 1.0000e+00 1.3618e-13 lowCoverage 1.0000e+00 1.3618e-11 lowCoverage 1.0000e+00 1.0230e-04 lowCoverage 1.0000e+00 4.2625e-03 lowCoverage -0.43925858 2.0456e-06 lowCoverage 2.5569e-04 lowCoverage chr15 62973250 62974250 47080 ENSG00000169094 0.302333 427 7 0.1904762 191 8 0.132035 267 6 0.223034 428 7 0.018849 113 8 0.286570 495 7 0.033331 296 8 0.0069597 220 7 0.176512 226 6 0.064503 220 6 0.048596 282 7 0.012311 180 6 0.0762987 244 7 0.0000000 36 3 0.056579 253 7 0.0260695 98 6 0.133934 212 5 0.271295 577 7 0.132275 232 6 0.337205 450 8 0.115152 98 8 0.0066949 229 5 0.223410 362 7 0.045536 171 8 0.397186 204 7 0.215475 358 7 0.140976 307 8 0.143162 111 7 0.085000 210 6 0.0174120 265 8 0.2770589 374 8 0.163719 501 8 0.0062500 144 7 0.0408497 189 6 0.1500000 241 4 0.039828 105 6 0.028205 138 12 0.2833333 289 7 0.190759 500 8 0.144189 302 7 0.087963 374 7 0.222770 462 7 0.049365 506 7 0.042627 0.0130463 0.022614 0.012941 0.013372 0.033203 0.021305 0.0118051 0.020296 0.019044 0.048053 0.0182821 0.0191210 0.0149215 0.011127 0.0328669 0.013311 0.026418 0.011482 0.0339292 0.035769 0.0138833 0.034504 0.030121 0.0140248 0.009373 0.047319 0.104325 0.024429 0.030004 0.0364992 0.024813 0.0086758 0.0200779 0.00816546 0.03501880 0.0289193 0.0054795 0.049452 0.017396 0.0098089 0.061160 0.054271 6 0.031772 0.041392 -2.4417e-03 7 0.232836 0.195440 0.0373963 0.2288278 0.41623983 insignificant 1.00000 1.00000 insignificant 0.318535 0.5194368 insignificant 1 1 insignificant -0.02610676 0.529983 insignificant 1 insignificant 0.031772 0.0199456 0.0191644 7 0.232836 0.1503250 0.0825109 3.1187e-03 9.8540e-01 weaklyHypermeth 3.3177e-02 1.0000e+00 weaklyHypermeth 3.4420e-02 9.9641e-01 weaklyHypermeth 3.6232e-01 1.0000e+00 insignificant 0.0350473 5.0160e-01 insignificant 1.0000e+00 insignificant 0.028593 0.049486 -0.0173592 7 0.166754 0.209388 -0.04263351 7.4188e-01 1.1857e-02 weaklyHypometh 1.0000e+00 5.1552e-01 insignificant 8.6520e-01 1.5509e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01255096 0.76199052 insignificant 1.000000 insignificant 0.041693 0.0198915 2.5886e-02 7 0.252908 0.1395875 0.1133207 1.0938e-02 9.9574e-01 weaklyHypermeth 1.0830e-01 1.0000e+00 insignificant 5.2135e-02 9.9972e-01 insignificant 5.2141e-01 1.00000000 insignificant 0.0611540 2.8586e-01 insignificant 1.0000e+00 insignificant 0.038534 0.049020 -0.0115940 7 0.237106 0.148571 0.0885349 1.6081e-01 4.0664e-03 weaklyHypometh 1.0000e+00 3.2814e-01 insignificant 3.1657e-01 3.6041e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 0.0135558 7.7195e-01 insignificant 1.0000000 insignificant 0.0164534 0.049020 -0.0273947 7 0.1246840 0.148571 -0.0238874 9.8590e-01 1.7055e-03 weaklyHypometh 1.0000e+00 2.2740e-02 weaklyHypometh 9.9869e-01 2.4012e-02 weaklyHypometh 1.0000e+00 2.8586e-01 insignificant -0.04759821 4.0128e-01 insignificant 1.0000e+00 insignificant chr15 63500250 63501250 47085 IGDCC4 ENSG00000103742 0.154976 306 10 0.0499089 440 12 0.109184 446 15 0.091954 270 11 0.084729 317 16 0.151634 701 13 0.071693 405 13 0.1154996 453 13 0.071212 390 12 0.073792 521 12 0.021228 463 13 0.040362 378 13 0.0529440 262 12 0.0649384 310 12 0.134152 381 13 0.0089286 310 12 0.047619 24 3 0.190342 425 12 0.148332 328 10 0.201260 503 12 0.072451 226 11 0.0804196 133 5 0.165173 363 11 0.076042 281 12 0.114401 186 7 0.100886 547 13 0.118483 529 13 0.055202 292 15 0.176218 433 10 0.0456939 556 13 0.0117364 435 13 0.144787 493 12 0.1918083 288 13 0.0986472 318 11 0.0194099 496 13 0.000000 40 3 0.095990 238 16 0.2440026 469 13 0.080355 462 10 0.115912 409 12 0.160604 262 10 0.122002 296 11 0.046575 298 13 0.042642 0.0135377 0.026817 0.058449 0.071203 0.080986 0.026600 0.0254162 0.014008 0.016192 0.045456 0.0074712 0.0451908 0.0330950 0.046748 0.0063059 0.075399 0.052984 0.027190 0.0286079 0.098603 0.0446733 0.055538 0.037336 0.0540396 0.024398 0.033839 0.029283 0.044885 0.019473 0.0118813 0.077677 0.1498257 0.0510572 0.00094215 0.11477468 0.1007957 0.3030854 0.038359 0.034344 0.0360320 0.091764 0.038218 10 0.037090 0.042301 -1.6321e-03 13 0.086874 0.128032 -0.0411583 0.9877545 0.80357185 insignificant 1.00000 1.00000 insignificant 0.999850 0.5171941 insignificant 1 1 insignificant -0.00255644 0.892885 insignificant 1 insignificant 0.037090 0.1676582 -0.1156359 13 0.086874 0.1061922 -0.0193184 9.9947e-01 6.7955e-04 weaklyHypometh 1.0000e+00 4.8539e-02 weaklyHypometh 9.9997e-01 9.0033e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0140751 7.4134e-01 insignificant 1.0000e+00 insignificant 0.036078 0.054418 -0.0098716 11 0.097481 0.110935 -0.01345402 9.8107e-01 6.9636e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9764e-01 7.5319e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01085516 0.64909148 insignificant 1.000000 insignificant 0.042086 0.1677489 -1.2402e-01 13 0.091700 0.1106168 -0.0189168 9.8948e-01 5.5028e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9873e-01 3.7586e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0115187 7.8956e-01 insignificant 1.0000e+00 insignificant 0.040742 0.054354 -0.0107281 11 0.131084 0.105653 0.0254319 9.5761e-01 1.7010e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3870e-01 8.6297e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0082987 7.3873e-01 insignificant 1.0000000 insignificant 0.1682192 0.054450 0.1175818 11 0.1314163 0.116774 0.0146424 5.1150e-01 9.8188e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.6627e-01 9.9715e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00321994 9.4288e-01 insignificant 1.0000e+00 insignificant chr15 64701150 64702150 47105 LCTL ENSG00000188501 0.063689 1349 31 0.0852303 735 32 0.169851 710 31 0.085639 1383 35 0.037881 377 26 0.074028 1311 33 0.050416 802 36 0.0600114 738 35 0.043345 898 31 0.096377 1058 36 0.061370 731 36 0.074874 784 31 0.0497884 794 32 0.0638889 248 8 0.028849 1009 36 0.0481100 813 31 0.025103 578 31 0.064342 1518 31 0.027540 490 30 0.075635 1195 32 0.097356 414 29 0.0714774 1125 35 0.098845 762 34 0.052633 519 35 0.036177 818 35 0.042315 1059 31 0.050102 753 35 0.060624 346 27 0.089382 498 32 0.0556028 1092 31 0.0261360 933 36 0.133726 1120 36 0.0721032 554 36 0.1217276 618 31 0.0888095 256 11 0.142458 471 31 0.160439 425 31 0.1386511 790 35 0.084635 1667 32 0.075391 1216 32 0.062171 1237 31 0.055265 1270 35 0.070304 1643 32 0.059892 0.0656965 0.175690 0.058632 0.036807 0.093299 0.045528 0.0482295 0.056016 0.101097 0.067980 0.0771954 0.0268813 0.0474363 0.045130 0.0477754 0.039552 0.069166 0.039356 0.0419013 0.086079 0.0499569 0.086740 0.067726 0.0309063 0.037251 0.041908 0.070357 0.077604 0.037617 0.0339729 0.147316 0.1034432 0.2251122 0.17919340 0.14414950 0.2393065 0.1171414 0.093806 0.087531 0.0740339 0.087199 0.060656 21 0.062496 0.061255 -1.2641e-03 35 0.070907 0.088834 -0.0179266 0.8525360 0.08503358 insignificant 1.00000 1.00000 insignificant 0.870824 0.1262246 insignificant 1 1 insignificant -0.00356629 0.759618 insignificant 1 insignificant 0.062500 0.1278099 -0.0706311 34 0.072596 0.1359484 -0.0633527 9.9114e-01 1.1923e-15 weaklyHypometh 1.0000e+00 2.9807e-13 weaklyHypometh 9.8255e-01 4.5575e-07 weaklyHypometh 1.0000e+00 9.1150e-05 weaklyHypometh -0.0563998 6.9852e-03 weaklyHypometh 1.3433e-01 insignificant 0.062164 0.056448 -0.0180919 32 0.063348 0.067727 -0.00437834 2.8340e-01 1.2082e-04 weaklyHypometh 1.0000e+00 2.0136e-02 weaklyHypometh 7.8158e-01 1.5421e-04 weaklyHypometh 1.0000e+00 3.8551e-02 weaklyHypometh -0.00525484 0.55626411 insignificant 1.000000 insignificant 0.061162 0.1278099 -6.5748e-02 34 0.079044 0.1359484 -0.0569040 9.9301e-01 3.4087e-07 weaklyHypometh 1.0000e+00 5.6812e-05 weaklyHypometh 9.7752e-01 6.0055e-05 weaklyHypometh 1.0000e+00 0.01201096 weaklyHypometh -0.0528335 1.0356e-02 weaklyHypometh 1.7553e-01 insignificant 0.060886 0.056448 -0.0120041 32 0.064501 0.067727 -0.0032260 2.7558e-01 3.6120e-03 weaklyHypometh 1.0000e+00 3.2814e-01 insignificant 5.9083e-01 4.9807e-03 weaklyHypometh 1.0000e+00 7.7944e-01 insignificant -0.0016885 8.7298e-01 insignificant 1.0000000 insignificant 0.1272610 0.056448 0.0564733 32 0.1250406 0.067727 0.0573137 4.4738e-04 8.6751e-01 weaklyHypermeth 5.4144e-02 1.0000e+00 weaklyHypermeth 5.3982e-03 7.0806e-01 weaklyHypermeth 7.7117e-01 1.0000e+00 insignificant 0.05114491 1.2366e-02 weaklyHypermeth 2.2484e-01 insignificant chr15 64701450 64702450 47106 LCTL ENSG00000188501 0.057748 1242 29 0.0843424 655 30 0.159949 646 29 0.078450 1274 33 0.035247 342 24 0.063581 1151 31 0.047347 734 34 0.0608382 672 33 0.038540 760 29 0.082848 894 34 0.051890 667 34 0.070717 681 29 0.0454103 681 30 0.0280423 178 6 0.025161 883 34 0.0406630 712 29 0.019736 537 29 0.053576 1369 29 0.023876 446 28 0.074078 1086 30 0.088399 377 27 0.0645454 1044 33 0.094616 706 32 0.046923 479 33 0.033707 780 33 0.036253 993 29 0.047492 682 33 0.050048 314 25 0.081631 440 30 0.0485315 984 29 0.0180845 859 34 0.116822 1025 34 0.0520007 503 34 0.0711150 563 29 0.0888095 256 11 0.117759 451 29 0.124685 391 29 0.1249975 722 33 0.069715 1566 30 0.059584 1100 30 0.049124 1142 29 0.036457 1174 33 0.063630 1581 30 0.048035 0.0615042 0.155593 0.040686 0.031067 0.073848 0.038620 0.0486165 0.046898 0.070778 0.049085 0.0689617 0.0154927 NA 0.039357 0.0322975 0.029636 0.048880 0.033157 0.0344894 0.063672 0.0333490 0.075485 0.057070 0.0259372 0.024143 0.035141 0.048862 0.062354 0.021045 0.0187571 0.114600 0.0670539 0.1346875 0.12495180 0.09664861 0.1659028 0.0856602 0.069189 0.058446 0.0520879 0.053644 0.046658 19 0.048302 0.049194 6.1434e-04 33 0.065632 0.083342 -0.0177104 0.8008053 0.09425974 insignificant 1.00000 1.00000 insignificant 0.816584 0.1479006 insignificant 1 1 insignificant -0.00348577 0.752566 insignificant 1 insignificant 0.048305 0.0890506 -0.0403967 32 0.067273 0.1117283 -0.0444556 9.7925e-01 2.1008e-09 weaklyHypometh 1.0000e+00 3.0012e-07 weaklyHypometh 9.6238e-01 1.4457e-04 weaklyHypometh 1.0000e+00 2.4034e-02 weaklyHypometh -0.0394592 2.4338e-02 weaklyHypometh 3.6132e-01 insignificant 0.047897 0.038854 -0.0050356 30 0.056737 0.054282 0.00245502 1.9511e-01 4.3035e-03 weaklyHypometh 1.0000e+00 2.5578e-01 insignificant 6.7234e-01 2.2483e-03 weaklyHypometh 1.0000e+00 2.0439e-01 insignificant 0.00139991 0.88016734 insignificant 1.000000 insignificant 0.049090 0.0890506 -3.7883e-02 32 0.072926 0.1117283 -0.0388025 9.8317e-01 2.4133e-04 weaklyHypometh 1.0000e+00 2.6814e-02 weaklyHypometh 9.5310e-01 7.2294e-03 weaklyHypometh 1.0000e+00 0.80326293 insignificant -0.0359734 3.9634e-02 weaklyHypometh 4.9542e-01 insignificant 0.048758 0.038854 -0.0045135 30 0.056677 0.054282 0.0023956 1.9792e-01 1.5912e-02 weaklyHypometh 1.0000e+00 6.0336e-01 insignificant 4.7265e-01 1.6746e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 0.0048857 6.4013e-01 insignificant 1.0000000 insignificant 0.0882148 0.038854 0.0348323 30 0.0967371 0.054282 0.0424555 3.3756e-03 7.8219e-01 weaklyHypermeth 3.0688e-01 1.0000e+00 insignificant 5.9668e-02 5.8331e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.04085907 2.1560e-02 weaklyHypermeth 3.3144e-01 insignificant chr15 64709950 64710950 47107 LCTL ENSG00000188501 0.764541 503 9 0.7951454 261 9 0.548931 313 9 0.786117 316 8 0.692949 160 8 0.819015 505 9 0.649428 197 9 0.6975470 258 9 0.536238 208 8 0.809504 243 8 0.806655 349 9 0.444729 169 9 0.7579227 327 9 0.6942060 195 6 0.700218 358 9 0.5634921 60 4 0.315420 880 5 0.604882 489 9 0.849081 363 9 0.827074 377 9 0.788839 103 7 0.2542424 194 8 0.805698 219 8 0.802243 164 8 0.658183 154 9 0.806531 434 9 0.530728 220 7 0.856597 68 5 0.732983 303 8 0.6638162 406 9 0.7802433 349 8 0.592109 371 8 0.7162265 257 8 0.8285084 290 9 0.9545455 430 8 0.790278 55 6 0.898611 142 9 0.8952820 347 8 0.341981 386 9 0.250248 385 9 0.344944 498 9 0.223545 528 8 0.594938 309 9 0.791118 0.7645632 0.639130 0.787996 0.666172 0.823050 0.678263 0.7008643 0.681755 0.834534 0.855377 0.5187242 0.7792715 0.7329978 0.733947 0.7044008 0.526099 0.615091 0.848143 0.8220983 0.773440 0.3760812 0.810493 0.828116 0.7095777 0.818388 0.604592 0.805030 0.724548 0.759961 0.7708388 0.840824 0.7862725 0.8248883 0.96793263 0.57771477 0.8751155 0.8906968 0.470916 0.437829 0.4166069 0.354479 0.607285 6 0.782575 0.740704 1.7227e-02 9 0.788277 0.537191 0.2510858 0.2666337 0.85686959 insignificant 1.00000 1.00000 insignificant 0.637344 0.4213525 insignificant 1 1 insignificant -0.00619636 0.916351 insignificant 1 insignificant 0.782449 0.8770546 -0.1244534 9 0.716400 0.8900184 -0.1736185 9.9895e-01 2.6577e-12 weaklyHypometh 1.0000e+00 5.3155e-10 weaklyHypometh 9.9971e-01 7.8575e-11 weaklyHypometh 1.0000e+00 7.8575e-08 weaklyHypometh -0.1640871 3.8600e-03 weaklyHypometh 7.7200e-02 weaklyHypometh 0.782509 0.506648 0.2773638 9 0.749782 0.342946 0.40683603 3.6886e-32 1.0000e+00 hypermethylated 3.6886e-29 1.0000e+00 hypermethylated 2.6944e-12 9.9999e-01 hypermethylated 1.3472e-09 1.0000e+00 hypermethylated 0.33202371 0.00380534 weaklyHypermeth 0.225904 insignificant 0.741773 0.8770546 -1.3769e-01 9 0.720387 0.8900184 -0.1696313 9.9742e-01 2.4566e-08 weaklyHypometh 1.0000e+00 6.1415e-06 weaklyHypometh 9.9928e-01 6.7290e-07 weaklyHypometh 1.0000e+00 0.00033645 weaklyHypometh -0.1578907 1.8412e-02 weaklyHypometh 2.7076e-01 insignificant 0.741200 0.506648 0.3015131 9 0.634862 0.342946 0.2919165 2.7625e-19 9.9701e-01 hypermethylated 1.3813e-16 1.0000e+00 hypermethylated 2.0302e-09 9.8954e-01 hypermethylated 6.7673e-07 1.0000e+00 hypermethylated 0.3382201 2.7318e-03 weaklyHypermeth 0.3560056 insignificant 0.8770546 0.506185 0.4516291 9 0.8900184 0.308045 0.5819737 1.6931e-31 1.0000e+00 hypermethylated 1.6931e-28 1.0000e+00 hypermethylated 2.6490e-10 1.0000e+00 hypermethylated 2.6490e-07 1.0000e+00 hypermethylated 0.49611081 4.7319e-04 hypermethylated 2.2533e-02 hypermethylated chr15 64733850 64734850 47111 LCTL ENSG00000188501 0.104322 689 25 0.0899639 617 19 0.211776 818 25 0.140684 411 20 0.101759 656 24 0.169148 566 25 0.065889 1074 25 0.1424246 521 25 0.067668 858 24 0.074509 671 23 0.118766 864 25 0.115139 890 25 0.0800408 694 25 NA 0 0 0.106408 967 25 0.0487060 827 23 0.061999 946 25 0.140590 427 17 0.062597 614 24 0.064104 655 25 0.108851 254 17 0.1845652 193 15 0.065526 596 25 0.091639 245 19 0.180932 181 14 0.177705 716 25 0.106749 365 23 0.126566 182 14 0.074957 510 24 0.1567513 593 24 0.0945177 852 25 0.080991 955 25 0.0474839 634 19 0.1382102 468 19 0.2585185 344 14 0.095259 302 20 0.319150 187 18 0.0799467 666 20 0.243197 580 24 0.293808 639 25 0.217673 372 21 0.134538 623 24 0.265254 579 22 0.107729 0.0927766 0.212054 0.161905 0.105714 0.208879 0.076572 0.1350498 0.067102 0.074279 0.131081 0.1226521 0.0894522 NA 0.117959 0.0553473 0.073114 0.144087 0.070994 0.0676234 0.113865 0.1443864 0.086254 0.062972 0.2063916 0.179151 0.112553 0.094131 0.074020 0.195886 0.0988416 0.096512 0.0647013 0.1860877 0.18949235 0.11056711 0.2656820 0.0847847 0.264296 0.309162 0.2049131 0.137308 0.270653 11 0.102724 0.122474 -1.3352e-02 25 0.100646 0.112008 -0.0113622 0.9941510 0.08476701 insignificant 1.00000 1.00000 insignificant 0.475942 0.9853211 insignificant 1 1 insignificant -0.01731273 0.288801 insignificant 1 insignificant 0.102724 0.1161092 -0.0120725 21 0.100646 0.1266511 -0.0260051 2.3572e-01 2.6527e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 2.0576e-03 7.9860e-01 inconclusive 3.3188e-02 1.0000e+00 inconclusive -0.0529282 2.9084e-01 insignificant 1.0000e+00 insignificant 0.102724 0.224132 -0.1218545 24 0.100646 0.238889 -0.13824256 1.0000e+00 1.3834e-42 weaklyHypometh 1.0000e+00 1.3834e-39 weaklyHypometh 1.0000e+00 4.8374e-15 weaklyHypometh 1.0000e+00 4.8374e-12 weaklyHypometh -0.12739427 0.00665069 weaklyHypometh 0.266028 insignificant 0.122474 0.1161092 -3.1949e-05 21 0.112008 0.1266511 -0.0146429 2.0515e-01 5.4345e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.1315e-01 8.8935e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0356155 4.6889e-01 insignificant 1.0000e+00 insignificant 0.122474 0.224132 -0.1138386 24 0.112008 0.238889 -0.1268803 9.9998e-01 1.3352e-19 weaklyHypometh 1.0000e+00 1.3352e-16 weaklyHypometh 1.0000e+00 8.4923e-10 weaklyHypometh 1.0000e+00 8.4923e-07 weaklyHypometh -0.1100815 1.0987e-02 weaklyHypometh 0.5493440 insignificant 0.1161092 0.224132 -0.1143295 20 0.1266511 0.238889 -0.1122374 1.0000e+00 5.7516e-11 weaklyHypometh 1.0000e+00 3.8344e-09 weaklyHypometh 1.0000e+00 1.2888e-06 weaklyHypometh 1.0000e+00 1.0740e-04 weaklyHypometh -0.07446609 1.8905e-01 insignificant 1.0000e+00 insignificant chr15 64740650 64741650 47112 LCTL ENSG00000188501 0.883826 332 8 0.8062601 191 8 0.754295 147 7 0.862692 322 8 0.864444 84 7 0.837474 276 8 0.731025 129 7 0.7970461 225 8 0.771060 125 8 0.846197 96 6 0.843316 292 8 0.824157 45 4 0.7066843 208 8 0.8786765 33 2 0.770526 105 6 0.5964286 43 5 0.775253 61 7 0.774064 409 6 0.821431 195 6 0.785969 275 8 0.901975 83 8 0.7074167 171 8 0.888057 221 8 0.769753 89 7 0.833357 251 8 0.855530 392 8 0.760709 159 8 0.750000 60 6 0.851149 187 8 0.7848289 347 8 0.8364650 305 8 0.681587 317 8 0.8527732 200 8 0.9117189 170 7 0.6950997 269 7 0.886784 126 5 0.691872 102 8 0.7715450 325 8 0.789648 275 8 0.798607 270 8 0.765751 276 6 0.820038 407 8 0.785463 231 6 0.844462 0.7791550 0.709203 0.849454 0.783533 0.827535 0.706455 0.7505513 0.737766 0.795722 0.832994 0.7965203 0.6956707 0.8077770 0.837185 0.6028066 0.714781 0.752461 0.808554 0.7741805 0.882684 0.6690946 0.874963 0.816379 0.7901853 0.861416 0.768940 0.911355 0.829850 0.778543 0.8074904 0.846819 0.8581764 0.8824912 0.87526407 0.88675496 0.9064080 0.8185921 0.739490 0.759071 0.7497924 0.754854 0.760914 4 0.784183 0.814341 -3.0459e-02 8 0.789901 0.659468 0.1304326 0.9721146 0.13651978 insignificant 1.00000 1.00000 insignificant 0.913360 0.2168404 insignificant 1 1 insignificant -0.00519461 0.839179 insignificant 1 insignificant 0.784183 0.8716443 -0.0861551 8 0.789901 0.6661679 0.1237329 5.8879e-01 4.0696e-05 weaklyHypometh 1.0000e+00 3.6996e-03 weaklyHypometh 9.1541e-01 1.6824e-04 weaklyHypometh 1.0000e+00 2.4034e-02 weaklyHypometh -0.0050909 9.0740e-01 insignificant 1.0000e+00 insignificant 0.784281 0.738862 0.0307536 7 0.799876 0.809304 -0.00942781 2.0985e-01 1.9691e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.1091e-01 4.3633e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00463991 0.79435568 insignificant 1.000000 insignificant 0.814341 0.8716443 -5.5723e-02 8 0.659468 0.6661679 -0.0066997 3.5893e-01 9.7737e-05 weaklyHypometh 1.0000e+00 1.2217e-02 weaklyHypometh 8.8420e-01 8.7170e-03 weaklyHypometh 1.0000e+00 0.87170162 insignificant 0.0001037 9.9819e-01 insignificant 1.0000e+00 insignificant 0.814973 0.738862 0.0605953 7 0.824335 0.809304 0.0150315 8.0633e-03 3.0514e-01 weaklyHypermeth 2.8798e-01 1.0000e+00 insignificant 1.8546e-02 5.4012e-01 weaklyHypermeth 8.0355e-01 1.0000e+00 insignificant 0.0098345 6.6282e-01 insignificant 1.0000000 insignificant 0.8738436 0.738862 0.1263158 7 0.8327099 0.809304 0.0234061 3.7368e-06 2.5655e-01 weaklyHypermeth 9.3420e-04 1.0000e+00 weaklyHypermeth 1.6262e-03 6.7463e-01 weaklyHypermeth 4.0656e-01 1.0000e+00 insignificant 0.00973083 8.1779e-01 insignificant 1.0000e+00 insignificant chr15 64929950 64930950 47132 SMAD6 ENSG00000137834 0.148518 283 7 0.1313676 318 7 0.070736 493 7 0.047721 243 7 0.128416 301 7 0.071630 381 7 0.048706 316 7 0.1538921 336 7 0.040788 332 7 0.055595 454 7 0.088304 367 7 0.050822 410 7 0.2555827 330 7 0.0265515 234 6 0.051882 547 7 0.0191984 305 7 0.079240 82 3 0.028014 296 7 0.077875 380 7 0.125593 267 7 0.044594 150 7 0.0548387 216 7 0.066223 197 7 0.032598 217 10 0.088151 143 7 0.132553 521 7 0.037845 475 7 0.095990 197 7 0.068584 389 7 0.1469436 461 7 0.1976529 415 7 0.360928 308 7 0.0096726 230 7 0.0175727 240 7 0.0000000 264 7 0.000000 85 4 0.119352 324 9 0.1248083 433 7 0.049826 419 7 0.022299 302 7 0.139086 296 7 0.031710 256 7 0.053321 278 7 0.151298 0.0484265 0.079289 0.064842 0.086597 0.093048 0.079798 0.0837037 0.048536 0.089164 0.087682 0.0723895 0.0475550 0.0453690 0.051598 0.0203155 0.140328 0.027774 0.077513 0.1062828 0.102369 0.0293085 0.105584 0.054028 0.1001225 0.072017 0.072508 0.090335 0.075268 0.041403 0.0657513 0.225691 0.0077875 0.0205317 0.00000000 0.00000000 0.0137484 0.0276676 0.048293 0.019754 0.0133095 0.022571 0.057625 7 0.071910 0.082181 -8.7516e-03 7 0.112087 0.074534 0.0375532 0.9204215 0.77344102 insignificant 1.00000 1.00000 insignificant 0.930835 0.7165424 insignificant 1 1 insignificant -0.02555347 0.403624 insignificant 1 insignificant 0.071890 0.0209391 0.0553902 7 0.118342 0.1154779 0.0028645 1.1397e-07 3.3721e-01 weaklyHypermeth 2.2257e-06 1.0000e+00 weaklyHypermeth 9.3485e-07 9.8390e-01 weaklyHypermeth 4.2493e-05 1.0000e+00 weaklyHypermeth 0.0397874 1.8794e-01 insignificant 1.0000e+00 insignificant 0.071568 0.033527 0.0368895 7 0.122099 0.140727 -0.01862834 1.1863e-03 9.9865e-01 weaklyHypermeth 6.9781e-02 1.0000e+00 weaklyHypermeth 2.1883e-03 9.9930e-01 weaklyHypermeth 1.9894e-01 1.0000e+00 insignificant 0.02577315 0.32438430 insignificant 1.000000 insignificant 0.082427 0.0209391 6.1246e-02 7 0.086001 0.1154779 -0.0294772 3.8747e-06 3.2815e-01 weaklyHypermeth 6.2495e-05 1.0000e+00 weaklyHypermeth 2.1091e-06 9.4551e-01 weaklyHypermeth 9.7355e-05 1.00000000 weaklyHypermeth 0.0653409 9.2794e-02 insignificant 9.3374e-01 insignificant 0.081723 0.033527 0.0464573 7 0.072989 0.140727 -0.0677386 2.5975e-03 9.4433e-01 weaklyHypermeth 1.3038e-01 1.0000e+00 insignificant 6.5094e-04 9.9629e-01 weaklyHypermeth 5.4245e-02 1.0000e+00 weaklyHypermeth 0.0513266 1.5268e-01 insignificant 1.0000000 insignificant 0.0180180 0.033527 -0.0199156 7 0.0538384 0.140727 -0.0868888 9.8428e-01 7.1168e-04 weaklyHypometh 1.0000e+00 1.1296e-02 weaklyHypometh 9.9817e-01 6.0441e-03 weaklyHypometh 1.0000e+00 9.9084e-02 weaklyHypometh -0.01401425 6.7257e-01 insignificant 1.0000e+00 insignificant chr15 64930250 64931250 47133 SMAD6 ENSG00000137834 0.148518 283 7 0.1313676 318 7 0.070736 493 7 0.047721 243 7 0.128416 301 7 0.071630 381 7 0.048706 316 7 0.1538921 336 7 0.040788 332 7 0.055595 454 7 0.088304 367 7 0.050822 410 7 0.2555827 330 7 0.0265515 234 6 0.051882 547 7 0.0191984 305 7 0.079240 82 3 0.028014 296 7 0.077875 380 7 0.125593 267 7 0.044594 150 7 0.0548387 216 7 0.066223 197 7 0.032598 217 10 0.088151 143 7 0.132553 521 7 0.037845 475 7 0.095990 197 7 0.068584 389 7 0.1469436 461 7 0.1976529 415 7 0.360928 308 7 0.0096726 230 7 0.0175727 240 7 0.0000000 264 7 0.000000 85 4 0.119352 324 9 0.1248083 433 7 0.049826 419 7 0.022299 302 7 0.139086 296 7 0.031710 256 7 0.053321 278 7 0.151298 0.0484265 0.079289 0.064842 0.086597 0.093048 0.079798 0.0837037 0.048536 0.089164 0.087682 0.0723895 0.0475550 0.0453690 0.051598 0.0203155 0.140328 0.027774 0.077513 0.1062828 0.102369 0.0293085 0.105584 0.054028 0.1001225 0.072017 0.072508 0.090335 0.075268 0.041403 0.0657513 0.225691 0.0077875 0.0205317 0.00000000 0.00000000 0.0137484 0.0276676 0.048293 0.019754 0.0133095 0.022571 0.057625 7 0.071910 0.082181 -8.7516e-03 7 0.112087 0.074534 0.0375532 0.9204215 0.77344102 insignificant 1.00000 1.00000 insignificant 0.930835 0.7165424 insignificant 1 1 insignificant -0.02555347 0.403624 insignificant 1 insignificant 0.071890 0.0209391 0.0553902 7 0.118342 0.1154779 0.0028645 1.1397e-07 3.3721e-01 weaklyHypermeth 2.2257e-06 1.0000e+00 weaklyHypermeth 9.3485e-07 9.8390e-01 weaklyHypermeth 4.2493e-05 1.0000e+00 weaklyHypermeth 0.0397874 1.8794e-01 insignificant 1.0000e+00 insignificant 0.071568 0.033527 0.0368895 7 0.122099 0.140727 -0.01862834 1.1863e-03 9.9865e-01 weaklyHypermeth 6.9781e-02 1.0000e+00 weaklyHypermeth 2.1883e-03 9.9930e-01 weaklyHypermeth 1.9894e-01 1.0000e+00 insignificant 0.02577315 0.32438430 insignificant 1.000000 insignificant 0.082427 0.0209391 6.1246e-02 7 0.086001 0.1154779 -0.0294772 3.8747e-06 3.2815e-01 weaklyHypermeth 6.2495e-05 1.0000e+00 weaklyHypermeth 2.1091e-06 9.4551e-01 weaklyHypermeth 9.7355e-05 1.00000000 weaklyHypermeth 0.0653409 9.2794e-02 insignificant 9.3374e-01 insignificant 0.081723 0.033527 0.0464573 7 0.072989 0.140727 -0.0677386 2.5975e-03 9.4433e-01 weaklyHypermeth 1.3038e-01 1.0000e+00 insignificant 6.5094e-04 9.9629e-01 weaklyHypermeth 5.4245e-02 1.0000e+00 weaklyHypermeth 0.0513266 1.5268e-01 insignificant 1.0000000 insignificant 0.0180180 0.033527 -0.0199156 7 0.0538384 0.140727 -0.0868888 9.8428e-01 7.1168e-04 weaklyHypometh 1.0000e+00 1.1296e-02 weaklyHypometh 9.9817e-01 6.0441e-03 weaklyHypometh 1.0000e+00 9.9084e-02 weaklyHypometh -0.01401425 6.7257e-01 insignificant 1.0000e+00 insignificant chr15 65199750 65200750 47161 SMAD3 ENSG00000166949 0.708582 283 6 0.6171578 114 9 0.461564 172 6 0.783794 295 6 0.667381 99 9 0.566757 245 6 0.759255 119 7 0.7416446 102 6 0.630559 135 6 0.614748 94 6 0.817707 187 8 0.518524 75 6 0.6121871 233 8 0.7361111 58 8 0.599992 150 6 0.8820806 71 5 0.635101 42 3 0.530039 404 7 0.812743 76 6 0.788851 265 6 0.765693 63 7 0.5272633 162 6 0.683408 127 9 0.672078 79 6 0.672051 112 8 0.648898 140 8 0.634981 124 9 0.766226 47 5 0.631122 74 6 0.7082211 168 8 0.7861389 125 8 0.615196 267 6 0.0514854 135 8 0.0259740 131 8 0.0000000 3 0 0.130952 97 8 0.107010 186 9 0.0447531 194 8 0.610822 276 5 0.679074 261 8 0.706764 228 6 0.420388 237 6 0.355871 367 6 0.819624 0.6745914 0.597850 0.833411 0.741556 0.860433 0.794842 0.6918515 0.753926 0.700513 0.802460 0.6417844 0.7331143 0.7200986 0.699384 0.8781641 0.744764 0.480572 0.811523 0.8027285 0.774812 0.5602360 0.745669 0.723668 0.6867695 0.740843 0.651022 0.865829 0.611040 0.791268 0.7979714 0.819567 0.0504728 0.0455829 0.02386256 0.00948345 0.0511525 0.0135946 0.725908 0.636084 0.7567980 0.531975 0.594565 5 0.748823 0.738575 -9.7783e-03 6 0.648454 0.634578 0.0138767 0.7276185 0.48838137 insignificant 1.00000 1.00000 insignificant 0.705833 0.6889169 insignificant 1 1 insignificant -0.00170079 0.959454 insignificant 1 insignificant 0.749206 0.0509383 0.6981029 6 0.642968 0.1152010 0.5277675 1.0150e-51 1.0000e+00 hypermethylated 1.2687e-49 1.0000e+00 hypermethylated 6.5834e-16 1.0000e+00 hypermethylated 1.0972e-13 1.0000e+00 hypermethylated 0.6142098 2.9630e-14 hypermethylated 7.4074e-12 hypermethylated 0.747434 0.685172 0.0825389 6 0.670630 0.612169 0.05846080 1.4660e-02 9.9458e-01 weaklyHypermeth 5.2359e-01 1.0000e+00 insignificant 1.8475e-02 9.9901e-01 weaklyHypermeth 7.1058e-01 1.0000e+00 insignificant 0.11965518 0.17008623 insignificant 1.000000 insignificant 0.739218 0.0509383 7.0387e-01 6 0.645793 0.1152010 0.5305916 2.7353e-48 1.0000e+00 hypermethylated 4.7735e-46 1.0000e+00 hypermethylated 1.0642e-14 1.0000e+00 hypermethylated 1.7737e-12 1.00000000 hypermethylated 0.6159105 4.1687e-12 hypermethylated 2.0843e-09 hypermethylated 0.739042 0.685944 0.0951021 6 0.681774 0.637517 0.0442563 1.2004e-02 9.9398e-01 weaklyHypermeth 4.1392e-01 1.0000e+00 insignificant 3.0116e-02 9.9486e-01 weaklyHypermeth 9.7147e-01 1.0000e+00 insignificant 0.1213560 1.6322e-01 insignificant 1.0000000 insignificant 0.0497981 0.685987 -0.6118282 6 0.0882412 0.634602 -0.5463613 1.0000e+00 1.5822e-25 hypomethylated 1.0000e+00 2.2603e-23 hypomethylated 1.0000e+00 4.4821e-08 hypomethylated 1.0000e+00 6.4031e-06 hypomethylated -0.49455458 1.4253e-03 weaklyHypometh 4.9148e-02 weaklyHypometh chr15 66892750 66893750 47216 ENSG00000214746 0.822890 228 9 0.8274364 269 9 0.634258 174 9 0.957139 121 8 0.903139 90 9 0.892135 395 8 0.885874 137 9 0.8526472 212 9 0.802033 161 9 0.901898 122 7 0.869013 439 9 0.867783 67 7 0.8999656 207 9 0.9375000 48 3 0.940860 137 9 0.9018530 61 6 0.768999 74 7 0.893314 119 8 0.855089 210 9 0.875223 378 9 0.897185 172 9 0.9305250 77 6 0.830931 181 9 0.902637 144 8 1.000000 49 5 0.863777 294 9 0.839117 122 7 0.820560 84 4 0.877822 171 9 0.9085535 283 9 0.8886129 356 9 0.856967 418 9 0.6363659 240 9 0.5532840 216 9 0.7695832 452 9 0.885504 71 5 0.461461 204 9 0.8345989 337 9 0.938582 240 8 0.895782 294 9 0.885949 167 8 0.898651 256 5 0.824680 203 6 0.866200 0.8375456 0.669854 0.952058 0.928798 0.895168 0.886936 0.8872726 0.828004 0.906129 0.880419 0.8791697 0.9161618 0.8809357 0.952607 0.9251022 0.831630 0.874360 0.864126 0.8882742 0.904957 0.8919773 0.828724 0.899352 0.9963511 0.887353 0.858184 0.821267 0.900507 0.924772 0.9165321 0.868417 0.6829706 0.6176100 0.88666742 0.87018831 0.6894614 0.8556721 0.945632 0.913394 0.9364802 0.922007 0.865179 4 0.876679 0.887282 -7.6097e-03 9 0.862579 0.872911 -0.0103315 0.9109649 0.35632418 insignificant 1.00000 1.00000 insignificant 0.780349 0.3023171 insignificant 1 1 insignificant -0.02027173 0.351198 insignificant 1 insignificant 0.876679 0.6717105 0.1680312 9 0.862579 0.6955265 0.1670528 6.7226e-11 9.9374e-01 weaklyHypermeth 1.6397e-09 1.0000e+00 weaklyHypermeth 2.8868e-06 9.9574e-01 weaklyHypermeth 1.0310e-04 1.0000e+00 weaklyHypermeth 0.1743195 5.0235e-02 insignificant 6.2083e-01 insignificant 0.876679 0.893103 -0.0359917 8 0.862579 0.895718 -0.03313910 9.8921e-01 3.3134e-03 weaklyHypometh 1.0000e+00 2.5488e-01 insignificant 9.6804e-01 3.7671e-03 weaklyHypometh 1.0000e+00 2.6908e-01 insignificant -0.02427615 0.33984825 insignificant 1.000000 insignificant 0.887282 0.6717105 1.8474e-01 9 0.872911 0.6955265 0.1773843 9.4637e-09 9.9794e-01 weaklyHypermeth 2.2533e-07 1.0000e+00 weaklyHypermeth 2.2491e-06 9.9998e-01 weaklyHypermeth 9.7786e-05 1.00000000 weaklyHypermeth 0.1945912 3.4811e-02 weaklyHypermeth 4.4629e-01 insignificant 0.887282 0.893103 -0.0316453 8 0.872911 0.895718 -0.0228076 9.7277e-01 1.1774e-02 weaklyHypometh 1.0000e+00 5.9878e-01 insignificant 9.6632e-01 9.9398e-03 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0040044 8.6699e-01 insignificant 1.0000000 insignificant 0.6717105 0.893103 -0.1422053 8 0.6955265 0.895718 -0.2001919 9.9992e-01 3.9088e-05 weaklyHypometh 1.0000e+00 8.4973e-04 weaklyHypometh 9.9995e-01 6.9605e-06 weaklyHypometh 1.0000e+00 4.6404e-04 weaklyHypometh -0.19859564 3.2233e-02 weaklyHypometh 4.4154e-01 insignificant chr15 67673850 67674850 47234 ENSG00000207119 0.751150 221 5 0.6478210 241 5 0.617519 181 5 0.854228 225 4 0.724737 91 5 0.594566 363 5 0.674635 89 5 0.6648567 160 5 0.626483 186 5 0.700484 146 5 0.740166 214 5 0.476429 71 5 0.6121153 213 5 0.5847874 95 4 0.546563 188 5 0.5639354 54 4 0.539524 28 2 0.649357 265 5 0.842264 119 5 0.583692 263 5 0.901389 53 4 0.5526696 88 4 0.817650 180 5 0.734931 96 3 0.643534 65 3 0.602399 213 5 0.640103 109 5 0.825404 99 5 0.752309 138 5 0.5971044 195 5 0.6887535 178 4 0.766540 259 5 0.4027653 212 5 0.1507246 83 4 0.1634615 194 4 0.385417 28 3 0.156157 160 5 0.4017487 206 5 0.593564 174 5 0.671742 177 5 0.547455 149 4 0.581594 184 5 0.454440 183 4 0.807111 0.5630160 0.574389 0.799300 0.718201 0.610600 0.621665 0.6997994 0.604347 0.728949 0.725604 0.4132727 0.6213235 0.5888151 0.570961 0.2911657 0.473238 0.602520 0.853592 0.5256641 0.842323 0.4978698 0.812115 0.709677 0.6817160 0.620848 0.591831 0.857984 0.718762 0.551346 0.7038727 0.776324 0.1716263 0.1743347 0.03913024 0.25745192 0.0605657 0.2335983 0.564715 0.693366 0.5451704 0.496506 0.533932 3 0.655142 0.718470 -5.9670e-02 5 0.679772 0.750256 -0.0704841 0.9821380 0.02082257 weaklyHypometh 1.00000 1.00000 insignificant 0.991567 0.0263567 weaklyHypometh 1 1 insignificant -0.06046653 0.124490 lowCoverage 1 lowCoverage 0.655142 0.2208381 0.4396169 5 0.679772 0.3934671 0.2863048 2.9318e-23 9.9842e-01 hypermethylated 1.7246e-21 1.0000e+00 hypermethylated 2.3504e-09 9.9949e-01 hypermethylated 1.6789e-07 1.0000e+00 hypermethylated 0.3730532 4.1618e-04 lowCoverage 1.1891e-02 lowCoverage 0.655142 0.562860 0.0797020 5 0.679772 0.634944 0.04482796 5.0208e-03 8.8834e-01 weaklyHypermeth 2.0920e-01 1.0000e+00 insignificant 3.1677e-02 8.2481e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.08000665 0.09283980 lowCoverage 1.000000 lowCoverage 0.718470 0.2208381 5.0128e-01 5 0.750256 0.3934671 0.3567890 4.2259e-19 1.0000e+00 hypermethylated 2.3477e-17 1.0000e+00 hypermethylated 1.0006e-08 1.0000e+00 hypermethylated 7.1474e-07 1.00000000 hypermethylated 0.4335198 8.7504e-05 lowCoverage 3.1251e-03 lowCoverage 0.718470 0.562860 0.1380981 5 0.750256 0.634944 0.1153121 1.2978e-03 9.9997e-01 weaklyHypermeth 8.1115e-02 1.0000e+00 weaklyHypermeth 6.2343e-03 9.9991e-01 weaklyHypermeth 3.4635e-01 1.0000e+00 insignificant 0.1404732 1.3061e-02 lowCoverage 0.5946740 lowCoverage 0.2208381 0.562860 -0.3880311 5 0.3934671 0.634944 -0.2414769 9.9979e-01 2.0803e-09 hypomethylated 1.0000e+00 9.4558e-08 hypomethylated 9.9992e-01 1.4911e-04 hypomethylated 1.0000e+00 5.4370e-03 hypomethylated -0.29304659 1.6780e-03 lowCoverage 5.5934e-02 lowCoverage chr15 68070250 68071250 47244 ENSG00000215958 0.645023 277 4 0.6620841 183 4 0.800626 125 5 0.658111 242 4 0.672348 87 5 0.725159 286 4 0.673107 128 4 0.7178381 225 5 0.677501 189 5 0.653663 142 5 0.762518 205 5 0.633333 126 5 0.7261264 228 4 0.6664639 123 5 0.642809 257 4 0.6563441 115 5 0.329870 77 5 0.591766 407 4 0.536331 153 4 0.552070 185 5 0.828571 82 4 0.3675878 180 4 0.655821 131 5 0.615985 115 5 0.701889 102 5 0.809343 285 5 0.652210 124 5 0.845371 117 4 0.658959 293 5 0.8438109 358 5 0.8004669 327 5 0.792510 211 4 0.7485487 264 5 0.7608493 184 4 0.7555556 78 1 0.301136 56 4 0.671422 160 5 0.3510562 320 5 0.208417 389 4 0.580473 192 4 0.309566 299 4 0.474563 229 4 0.463311 224 4 0.632191 0.7134615 0.793833 0.551097 0.654652 0.637943 0.812000 0.7191780 0.742074 0.682674 0.714369 0.7202068 0.7386810 0.6527714 0.607415 0.8464188 0.397680 0.559697 0.467476 0.4734927 0.773406 0.3269731 0.677905 0.561249 0.7273326 0.734523 0.842028 0.817198 0.677505 0.818901 0.7496196 0.812962 0.7691191 0.8180592 0.90002652 0.30710566 0.7002545 0.3213536 0.234710 0.454471 0.2730132 0.462318 0.403789 4 0.638830 0.714224 -7.7670e-02 4 0.641270 0.729793 -0.0885234 0.9999539 0.00105248 lowCoverage 1.00000 0.26312 lowCoverage 0.999459 0.0020604 lowCoverage 1 1 lowCoverage -0.06522248 0.169187 lowCoverage 1 lowCoverage 0.638830 0.5969868 0.0245209 4 0.641270 0.5954768 0.0457929 2.2822e-01 5.4747e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 4.0546e-01 2.7403e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0510600 5.9225e-01 lowCoverage 1.0000e+00 lowCoverage 0.638830 0.316579 0.2997151 4 0.641270 0.361188 0.28008214 2.4613e-14 1.0000e+00 lowCoverage 6.1531e-12 1.0000e+00 lowCoverage 1.6922e-08 9.9995e-01 lowCoverage 3.3845e-06 1.0000e+00 lowCoverage 0.24188860 0.01802405 lowCoverage 0.563252 lowCoverage 0.714224 0.5969868 1.0440e-01 5 0.729793 0.5954768 0.1343163 2.6605e-03 9.8441e-01 weaklyHypermeth 2.9561e-02 1.0000e+00 weaklyHypermeth 5.2662e-02 7.8422e-01 insignificant 5.2141e-01 1.00000000 insignificant 0.1162825 2.6402e-01 lowCoverage 1.0000e+00 lowCoverage 0.714224 0.316579 0.3765686 4 0.729793 0.361188 0.3686055 2.2207e-13 1.0000e+00 lowCoverage 3.7011e-11 1.0000e+00 lowCoverage 2.7677e-07 1.0000e+00 lowCoverage 6.9193e-05 1.0000e+00 lowCoverage 0.3071111 5.0818e-03 lowCoverage 0.3909105 lowCoverage 0.5969868 0.316579 0.2759044 4 0.5954768 0.361188 0.2342892 2.2748e-04 9.9489e-01 lowCoverage 3.7913e-02 1.0000e+00 lowCoverage 1.3708e-02 9.9428e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.19082857 1.1579e-01 lowCoverage 1.0000e+00 lowCoverage chr15 68553850 68554850 47272 ENSG00000200216 0.962454 288 8 0.8473310 203 12 0.526446 303 12 0.900112 97 8 0.935185 65 8 0.928090 210 9 0.749197 165 9 0.8928650 124 11 0.784065 130 8 0.905023 173 8 0.942031 281 11 0.825132 90 8 0.9384769 181 11 0.5000000 2 0 0.899647 112 9 0.9934641 72 6 0.952625 80 8 0.719041 125 8 0.955847 155 11 0.955230 259 9 0.852837 108 7 1.0000000 29 3 0.869908 266 13 0.787879 76 5 1.000000 34 1 0.959108 292 14 0.824833 129 8 0.779293 87 6 0.897569 111 10 0.9479017 271 14 0.9330985 263 15 0.980419 298 8 0.1004326 281 15 0.4890333 237 11 0.1338889 290 13 0.781393 68 8 0.145290 105 7 0.8949839 197 12 0.940505 181 8 0.937592 315 8 0.962758 154 8 0.974272 279 8 0.466433 126 8 0.945988 0.9468268 0.653151 0.908660 0.958159 0.978834 0.945190 0.8616872 0.825475 0.948985 0.928526 0.9146742 0.9724230 NA 0.927602 0.9849865 0.957796 0.918005 0.950667 0.9495174 0.848033 1.0000000 0.970350 0.963389 1.0000000 0.931244 0.929557 0.928708 0.977685 0.956497 0.9192034 0.962496 0.0969023 0.3645509 0.06168559 0.88839410 0.1752496 0.9612180 0.952749 0.966758 0.9494914 0.954988 0.571041 5 0.905618 0.942464 -3.8964e-02 8 0.857242 0.939070 -0.0818279 0.9999923 0.00049581 weaklyHypometh 1.00000 0.24791 insignificant 0.996596 0.0161949 weaklyHypometh 1 1 insignificant -0.04712405 0.230604 insignificant 1 insignificant 0.905618 0.3361630 0.5334929 8 0.857242 0.3340444 0.5231981 5.1998e-41 1.0000e+00 hypermethylated 5.7775e-39 1.0000e+00 hypermethylated 1.0442e-13 1.0000e+00 hypermethylated 1.0442e-11 1.0000e+00 hypermethylated 0.4314427 2.9189e-02 weaklyHypermeth 4.0483e-01 insignificant 0.905618 0.906161 0.0097212 8 0.857242 0.852554 0.00468812 5.1845e-01 8.2818e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.0158e-01 8.5355e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00069882 0.99483263 insignificant 1.000000 insignificant 0.942464 0.3361630 5.9152e-01 11 0.939070 0.3340444 0.6050259 1.3835e-38 1.0000e+00 hypermethylated 1.7294e-36 1.0000e+00 hypermethylated 1.1974e-15 1.0000e+00 hypermethylated 2.9935e-13 1.00000000 hypermethylated 0.4785668 2.0253e-02 weaklyHypermeth 2.8928e-01 insignificant 0.942464 0.906161 0.0421551 8 0.939070 0.852554 0.0865160 2.6077e-03 9.9809e-01 weaklyHypermeth 1.3038e-01 1.0000e+00 insignificant 2.3764e-02 9.8336e-01 weaklyHypermeth 8.4870e-01 1.0000e+00 insignificant 0.0464252 6.6539e-01 insignificant 1.0000000 insignificant 0.3361630 0.906161 -0.5340481 8 0.3340444 0.852554 -0.5185099 1.0000e+00 7.5609e-13 hypomethylated 1.0000e+00 6.3007e-11 hypomethylated 1.0000e+00 1.1338e-06 hypomethylated 1.0000e+00 1.0307e-04 hypomethylated -0.43214154 3.6324e-02 weaklyHypometh 4.8432e-01 insignificant chr15 68792150 68793150 47285 UACA ENSG00000137831 0.819968 78 8 0.7902384 94 8 0.491071 41 3 0.867647 78 8 0.793750 29 1 0.888889 48 4 0.629630 30 3 0.8165467 143 8 0.881250 28 1 0.833333 32 2 0.830637 330 8 0.625000 11 0 0.8875000 78 8 0.7708333 29 3 0.875000 34 3 0.6666667 6 0 0.642857 10 0 0.875000 49 3 0.873106 91 8 0.786310 46 8 0.831845 43 5 0.6111111 23 3 0.805804 58 8 0.790741 28 1 0.729167 48 3 0.885325 187 8 0.778976 85 8 0.234286 20 3 0.853846 69 8 0.9316718 116 8 0.8569302 127 8 0.898881 126 8 0.8288690 40 4 0.8204861 73 8 0.8597155 208 8 1.000000 3 0 0.841186 67 5 0.8658341 176 8 0.735833 95 4 0.739583 136 8 0.807292 64 3 0.638889 36 3 0.890179 67 3 0.864431 0.5508827 0.511662 0.683073 0.469388 0.718821 0.628118 0.5365076 0.693878 0.666667 0.732245 0.4285714 0.7306122 0.5918367 0.691610 0.6724601 0.510204 0.685131 0.761905 0.5725948 0.728377 0.6666667 0.589286 0.559184 0.7580184 0.752004 0.607548 0.403062 0.698587 0.849554 0.7138048 0.873365 0.6647230 0.6326531 0.72184874 0.99968559 0.7494505 0.7195933 0.734150 0.654053 0.7295918 0.659545 0.742080 0 0.788776 0.820430 -3.0773e-02 8 0.808096 0.837208 -0.0291116 0.8567964 0.26006720 insignificant 1.00000 1.00000 insignificant 0.338994 0.5314527 insignificant 1 1 insignificant 0.01487967 0.806887 lowCoverage 1 lowCoverage 0.788898 0.8518519 -0.0357089 8 0.822620 0.8578849 -0.0352646 9.3760e-01 9.3548e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 2.8896e-01 2.9680e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0870868 3.2777e-02 lowCoverage 4.3702e-01 lowCoverage 0.788776 0.743719 -0.0022382 4 0.808096 0.746525 0.06157104 6.8203e-01 7.9017e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 6.3274e-01 6.5833e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.01990647 0.69441870 lowCoverage 1.000000 lowCoverage 0.821235 0.8518519 -5.0734e-03 8 0.846510 0.8578849 -0.0113750 6.0389e-01 3.0274e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.9311e-01 3.0158e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.1019665 1.1373e-01 insignificant 1.0000e+00 insignificant 0.820043 0.743073 0.0325650 4 0.819120 0.718361 0.1007585 1.6175e-01 9.7164e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.9898e-01 6.8829e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0050268 9.4255e-01 lowCoverage 1.0000000 lowCoverage 0.8518519 0.744949 0.0303020 4 0.8578849 0.808157 0.0497284 3.0872e-02 7.3865e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 5.0932e-01 7.7504e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.10699328 6.8112e-02 lowCoverage 7.5193e-01 lowCoverage chr15 68918750 68919750 47291 ENSG00000156577 0.842505 287 10 0.7576012 154 10 0.619320 131 10 0.891250 120 10 0.744231 94 10 0.725389 273 10 0.695734 132 10 0.7289377 118 9 0.720448 133 10 0.760440 106 10 0.774089 219 10 0.649560 81 10 0.7692918 117 10 0.8125000 16 0 0.673306 128 10 0.6512987 63 6 0.800963 79 6 0.778608 163 9 0.825505 138 10 0.709072 236 6 0.858889 58 6 0.8563636 73 6 0.764167 140 10 0.648056 49 5 0.819524 71 9 0.745107 182 10 0.895317 69 9 0.896667 33 4 0.785556 90 10 0.7838499 174 10 0.7376205 132 10 0.770017 326 10 0.6459635 94 9 0.6033425 107 10 0.7228626 187 10 0.774725 78 6 0.740198 62 8 0.7742116 185 10 0.790024 198 6 0.813179 240 10 0.772961 235 10 0.838354 235 6 0.798922 279 10 0.848356 0.7240028 0.660130 0.835868 0.738484 0.730471 0.668623 0.7393191 0.711196 0.776093 0.775624 0.7218666 0.7994144 0.7614191 0.732118 0.7161410 0.696429 0.793497 0.818668 0.7706794 0.804301 0.8354001 0.806912 0.777535 0.8463243 0.729967 0.901953 0.869124 0.774757 0.781229 0.7326772 0.805415 0.7453142 0.5894461 0.67433718 0.77191472 0.7334065 0.7499000 0.808079 0.795200 0.8007962 0.759189 0.817526 5 0.762554 0.794560 -3.0449e-02 10 0.757050 0.784304 -0.0272539 0.9795176 0.00995195 weaklyHypometh 1.00000 0.90472 insignificant 0.998815 0.0018999 weaklyHypometh 1 1 insignificant -0.05025859 0.066795 insignificant 1 insignificant 0.762554 0.6998597 0.0640472 10 0.757050 0.6972667 0.0597829 2.2440e-03 9.8298e-01 weaklyHypermeth 2.4391e-02 1.0000e+00 weaklyHypermeth 2.7106e-01 8.6464e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0362852 2.9903e-01 insignificant 1.0000e+00 insignificant 0.762554 0.788543 -0.0261997 10 0.757050 0.780699 -0.02364955 9.7186e-01 1.3454e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9841e-01 4.2779e-03 weaklyHypometh 1.0000e+00 2.7601e-01 insignificant -0.05618539 0.00813491 weaklyHypometh 0.302808 insignificant 0.794560 0.6998597 9.4330e-02 10 0.784304 0.6972667 0.0870368 7.2635e-05 9.8532e-01 weaklyHypermeth 9.9500e-04 1.0000e+00 weaklyHypermeth 8.1325e-03 9.7817e-01 weaklyHypermeth 1.0426e-01 1.00000000 insignificant 0.0865438 3.4609e-02 weaklyHypermeth 4.4629e-01 insignificant 0.794560 0.788543 0.0070600 10 0.784304 0.780699 0.0036044 4.5594e-01 7.4507e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.8035e-01 6.9946e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0059268 8.0588e-01 insignificant 1.0000000 insignificant 0.6998597 0.788543 -0.0865903 10 0.6972667 0.780699 -0.0834324 9.9848e-01 5.0291e-03 weaklyHypometh 1.0000e+00 5.5879e-02 weaklyHypometh 9.9945e-01 1.1839e-02 weaklyHypometh 1.0000e+00 1.6914e-01 insignificant -0.09247057 2.2206e-02 weaklyHypometh 3.3144e-01 insignificant chr15 69209450 69210450 47300 THSD4 ENSG00000187720 0.810204 254 12 0.6438665 185 12 0.686355 80 10 0.827503 165 6 0.648825 241 9 0.777244 121 9 0.843074 234 10 0.7570346 85 6 0.841012 121 10 0.730403 83 9 0.837939 225 12 0.746006 163 7 0.6929424 304 10 0.7601437 232 10 0.844910 163 9 0.8561111 97 7 0.849817 160 4 0.883800 266 9 0.713980 67 7 0.658532 64 6 0.800317 67 8 0.9333333 22 4 0.723916 288 11 0.763889 71 6 0.857016 153 12 0.859921 114 8 0.738156 69 8 0.721717 53 3 0.889137 204 9 0.6555107 98 8 0.7423903 110 8 0.765476 90 8 0.7208484 249 12 0.6473360 89 10 0.7209177 152 8 0.597222 22 0 0.710495 134 11 0.7564103 95 8 0.870003 156 12 0.912495 163 12 0.793552 196 12 0.689017 261 9 0.862002 173 12 0.805561 0.6601579 0.658969 0.759412 0.709950 0.742638 0.824123 0.7707581 0.785425 0.809345 0.754144 0.7220096 0.7337909 0.7754942 0.837641 0.8095238 0.764875 0.842086 0.705394 0.7421679 0.810491 0.7715158 0.728616 0.768588 0.8261839 0.776383 0.761338 0.706288 0.765738 0.795063 0.8150474 0.659398 0.7420551 0.6715415 0.63975729 0.51629073 0.7382462 0.7221708 0.822636 0.850857 0.7918601 0.715613 0.845796 0 0.809668 0.803585 -6.5540e-03 10 0.752503 0.739947 0.0125562 0.9536877 0.43162597 insignificant 1.00000 1.00000 insignificant 0.992482 0.1568413 insignificant 1 1 insignificant -0.01707985 0.564685 insignificant 1 insignificant 0.814081 0.7692308 0.0456643 10 0.767682 0.7049360 0.0627465 1.3290e-03 9.7352e-01 weaklyHypermeth 1.4767e-02 1.0000e+00 weaklyHypermeth 1.5469e-03 9.0285e-01 weaklyHypermeth 2.7181e-02 1.0000e+00 weaklyHypermeth 0.0782801 2.2734e-02 weaklyHypermeth 3.4975e-01 insignificant 0.811067 0.832455 -0.0208894 10 0.736361 0.822202 -0.08584188 9.6000e-01 7.1440e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9012e-01 7.2064e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.05492868 0.24857723 insignificant 1.000000 insignificant 0.808012 0.7692308 5.0572e-02 12 0.795285 0.7049360 0.0903488 5.4390e-03 9.9893e-01 weaklyHypermeth 5.6657e-02 1.0000e+00 weaklyHypermeth 2.2286e-03 9.9986e-01 weaklyHypermeth 3.6534e-02 1.00000000 weaklyHypermeth 0.0953600 1.3352e-02 weaklyHypermeth 2.1194e-01 insignificant 0.808251 0.832455 -0.0169679 12 0.776291 0.822202 -0.0459112 8.7923e-01 7.9545e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 8.5477e-01 3.3561e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0378488 4.3371e-01 insignificant 1.0000000 insignificant 0.7739726 0.832804 -0.0616841 12 0.7807587 0.834236 -0.0534776 9.7718e-01 8.9793e-03 weaklyHypometh 1.0000e+00 9.0700e-02 weaklyHypometh 9.5198e-01 1.4181e-02 weaklyHypometh 1.0000e+00 1.9013e-01 insignificant -0.13320878 2.3484e-02 weaklyHypometh 3.4034e-01 insignificant chr15 69316850 69317850 47303 THSD4 ENSG00000187720 0.852148 172 5 0.8470058 662 5 0.826637 132 5 0.934273 147 5 0.917576 99 5 0.870687 322 5 0.896430 217 5 0.8817145 198 5 0.752206 81 5 0.971429 66 5 0.911340 367 5 0.830000 25 3 0.9080289 89 5 0.9171242 86 5 0.879701 176 5 0.7777778 20 2 NA 0 0 0.982576 104 5 0.924341 378 5 0.929207 303 5 0.968421 75 5 0.9050505 55 5 0.917360 161 5 0.941667 55 5 0.950000 38 3 0.948304 462 5 0.890833 134 5 0.738816 86 5 0.910926 386 5 0.9484497 490 5 0.9422027 575 5 0.866269 292 5 0.6155766 257 5 0.7013832 158 5 0.6766078 454 3 1.000000 2 0 0.701148 239 5 0.5981753 433 5 0.926848 252 5 0.918360 169 5 0.954941 89 5 0.904232 83 5 0.936251 156 5 0.855182 0.8563635 0.819526 0.934255 0.930457 0.866782 0.893608 0.8764272 0.734766 0.972772 0.909271 0.8034653 0.9193401 0.9207986 0.872409 0.8358520 NA 0.980236 0.922245 0.9304221 0.971079 0.9121412 0.911149 0.954827 0.9665842 0.949448 0.910437 0.742746 0.908865 0.947192 0.9391791 0.872347 0.6740437 0.7596596 0.73486808 0.77790121 0.7476273 0.6740394 0.921457 0.916068 0.9657966 0.897446 0.944187 5 0.891328 0.923460 -3.2022e-02 5 0.891240 0.921806 -0.0305656 0.9916483 0.00629527 weaklyHypometh 1.00000 0.69542 insignificant 0.871017 0.0206302 weaklyHypometh 1 1 insignificant -0.02594418 0.259996 lowCoverage 1 lowCoverage 0.891328 0.6992871 0.2343400 5 0.891240 0.6195503 0.2716898 8.2234e-20 3.2441e-01 hypermethylated 4.1117e-18 1.0000e+00 hypermethylated 3.6094e-03 5.4905e-01 weaklyHypermeth 5.1563e-02 1.0000e+00 weaklyHypermeth 0.1692656 3.5393e-02 lowCoverage 4.5964e-01 lowCoverage 0.891328 0.929239 -0.0377251 5 0.891240 0.929344 -0.03810418 9.9725e-01 2.1457e-02 weaklyHypometh 1.0000e+00 6.3109e-01 insignificant 9.9201e-01 8.0109e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04337900 0.01408898 lowCoverage 0.454483 lowCoverage 0.923460 0.6992871 2.4814e-01 5 0.921806 0.6195503 0.3022554 5.0515e-14 8.4592e-01 hypermethylated 2.1963e-12 1.0000e+00 hypermethylated 4.5162e-04 9.3965e-01 hypermethylated 9.4088e-03 1.00000000 hypermethylated 0.1952098 2.0539e-02 lowCoverage 2.8928e-01 lowCoverage 0.923460 0.929239 -0.0059842 5 0.921806 0.929344 -0.0075386 8.0196e-01 5.3903e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.5147e-01 5.5868e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0174348 3.9064e-01 lowCoverage 1.0000000 lowCoverage 0.6992871 0.929239 -0.2736200 5 0.6195503 0.929344 -0.3097940 8.9711e-01 9.6824e-09 hypomethylated 1.0000e+00 3.8730e-07 hypomethylated 6.7625e-01 1.7403e-02 weaklyHypometh 1.0000e+00 2.2899e-01 insignificant -0.21264461 1.5643e-02 lowCoverage 2.7934e-01 lowCoverage chr15 69639650 69640650 47313 ENSG00000203498 0.840553 128 5 0.7846371 89 5 0.751061 107 5 0.856859 102 5 0.761111 39 5 0.800731 138 5 0.831319 72 5 0.7607190 76 5 0.660513 57 5 0.837233 68 5 0.811687 115 5 0.786111 43 5 0.7995771 92 5 NA 0 0 0.819762 75 5 0.7797619 46 5 0.715556 48 5 0.835539 91 5 0.786466 123 5 0.837729 150 5 0.886996 43 3 0.9333333 47 5 0.789206 99 5 0.925000 34 4 0.921429 33 4 0.841493 128 5 0.844444 33 4 0.733333 43 3 0.835209 85 5 0.7763810 94 5 0.8119658 130 5 0.785174 224 5 0.7547619 71 5 0.6256355 84 5 0.6920652 103 5 0.800000 65 5 0.666667 32 3 0.7351653 105 5 0.827680 146 5 0.811751 181 5 0.845153 110 5 0.860516 173 5 0.831330 122 5 0.844012 0.8118976 0.751927 0.886910 0.764060 0.823820 0.824930 0.7940975 0.693226 0.843643 0.818619 0.8196159 0.7915535 NA 0.858833 0.8104056 0.714678 0.843405 0.790718 0.8326154 0.860489 0.9506173 0.797538 0.907407 0.9400353 0.875899 0.807956 0.720165 0.837333 0.798001 0.8172417 0.776621 0.7713110 0.6461470 0.70625335 0.75308642 0.6594650 0.7482679 0.845434 0.818855 0.8603611 0.869051 0.831059 4 0.802893 0.819738 -1.7157e-02 5 0.797837 0.816125 -0.0182874 0.9440360 0.10364114 insignificant 1.00000 1.00000 insignificant 0.978147 0.0047969 weaklyHypometh 1 1 insignificant -0.04786073 0.041361 lowCoverage 1 lowCoverage 0.802893 0.7130435 0.0910411 5 0.797837 0.7081381 0.0896990 2.1332e-05 9.9995e-01 weaklyHypermeth 3.0551e-04 1.0000e+00 weaklyHypermeth 9.1231e-04 9.9932e-01 weaklyHypermeth 1.7213e-02 1.0000e+00 weaklyHypermeth 0.0800873 2.4931e-02 lowCoverage 3.6132e-01 lowCoverage 0.802893 0.837432 -0.0374452 5 0.797837 0.835130 -0.03729312 9.9515e-01 4.1186e-02 weaklyHypometh 1.0000e+00 9.1525e-01 insignificant 9.9671e-01 4.1545e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.04281654 0.00623256 lowCoverage 0.266028 lowCoverage 0.819738 0.7130435 1.0716e-01 5 0.816125 0.7081381 0.1079864 1.3927e-05 1.0000e+00 weaklyHypermeth 2.1760e-04 1.0000e+00 weaklyHypermeth 4.0199e-05 1.0000e+00 weaklyHypermeth 1.2967e-03 1.00000000 weaklyHypermeth 0.1279480 2.3219e-03 lowCoverage 5.5241e-02 lowCoverage 0.819738 0.837432 -0.0202976 5 0.816125 0.835130 -0.0190057 9.4050e-01 3.4013e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.8660e-01 7.5648e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0050442 8.0937e-01 lowCoverage 1.0000000 lowCoverage 0.7130435 0.837432 -0.1274811 5 0.7081381 0.835130 -0.1269921 1.0000e+00 2.1925e-05 weaklyHypometh 1.0000e+00 4.8723e-04 weaklyHypometh 1.0000e+00 4.6355e-05 weaklyHypometh 1.0000e+00 2.3178e-03 weaklyHypometh -0.12290382 3.9758e-03 lowCoverage 9.4662e-02 lowCoverage chr15 72035850 72036850 47348 LOXL1 ENSG00000129038 0.700000 58 3 0.7053571 171 5 0.700101 81 5 1.000000 6 0 0.825505 50 5 0.781352 55 5 0.896998 75 3 0.9817805 137 5 0.799823 99 5 0.813203 74 3 0.885693 197 5 0.912778 94 5 0.8566184 220 5 NA 0 0 0.787179 129 5 0.7422222 36 3 0.975000 28 3 0.666667 18 3 0.931146 114 5 0.837067 81 5 0.657143 30 4 0.4000000 8 0 0.904945 73 5 0.931429 15 2 1.000000 2 0 0.806799 236 5 0.766667 30 3 0.833333 29 2 0.821256 197 5 0.8789707 229 5 0.8292603 190 5 0.891261 146 5 0.0105263 206 5 0.0000000 152 5 0.0000000 26 3 0.000000 16 0 0.025000 44 5 0.0000000 256 5 0.846667 33 3 0.852273 70 5 0.880000 17 3 0.916667 34 5 0.870635 38 5 0.670732 0.7047038 0.681461 0.915191 0.833764 0.788959 0.893779 0.9844468 0.780337 0.797857 0.884651 0.9163957 0.8532108 NA 0.781739 0.7799458 0.978659 0.742553 0.926588 0.8260680 0.686411 0.3414634 0.913629 0.916376 0.9109134 0.788034 0.764228 0.821138 0.834110 0.869679 0.8194521 0.886268 0.0128370 0.0000000 0.00000000 0.00000000 0.0213415 0.0000000 0.820325 0.847284 0.8975610 0.910569 0.868660 0 0.848520 0.853165 -6.0385e-03 5 0.838938 0.841262 -0.0023243 0.6192961 0.48528820 insignificant 1.00000 1.00000 insignificant 0.816070 0.3882138 insignificant 1 1 insignificant 0.02141089 0.677486 lowCoverage 1 lowCoverage 0.848520 0.0028571 0.8458271 5 0.838938 0.0040840 0.8348537 2.7236e-64 1.0000e+00 hypermethylated 6.8089e-62 1.0000e+00 hypermethylated 1.6556e-14 1.0000e+00 hypermethylated 2.0695e-12 1.0000e+00 hypermethylated 0.8255785 1.0119e-18 lowCoverage 1.0119e-15 lowCoverage 0.848520 0.875000 -0.0319411 5 0.838938 0.869414 -0.03047673 8.3556e-01 8.8000e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.0744e-01 4.4256e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.04174868 0.12958621 lowCoverage 1.000000 lowCoverage 0.853165 0.0028571 8.5037e-01 5 0.841262 0.0040840 0.8371781 2.8641e-48 1.0000e+00 hypermethylated 4.7735e-46 1.0000e+00 hypermethylated 1.4710e-11 1.0000e+00 hypermethylated 1.4710e-09 1.00000000 hypermethylated 0.8041676 1.4209e-09 lowCoverage 1.7762e-07 lowCoverage 0.853165 0.875000 -0.0269846 5 0.841262 0.869414 -0.0281524 6.9188e-01 7.1663e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 7.5064e-01 9.9524e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0631596 1.9870e-01 lowCoverage 1.0000000 lowCoverage 0.0028571 0.875000 -0.8713801 5 0.0040840 0.869414 -0.8653305 1.0000e+00 6.3038e-36 hypomethylated 1.0000e+00 1.2608e-33 hypomethylated 1.0000e+00 1.7567e-09 hypomethylated 1.0000e+00 2.9278e-07 hypomethylated -0.86732714 1.9524e-08 lowCoverage 1.9524e-05 lowCoverage chr15 72466150 72467150 47365 CYP11A1 ENSG00000140459 0.916792 427 12 0.7969639 209 11 0.865468 357 11 0.908857 367 12 0.851006 160 11 0.882243 429 12 0.897490 280 11 0.8870764 237 11 0.831009 281 11 0.910576 369 11 0.864985 328 11 0.881259 270 11 0.8841302 325 11 0.8466657 220 6 0.920200 424 11 0.5662322 283 9 0.628571 59 8 0.786087 350 12 0.832517 362 12 0.886056 318 12 0.801010 137 11 0.8822464 206 11 0.871622 197 12 0.821319 220 11 0.941566 187 11 0.855457 342 12 0.828516 242 11 0.835827 143 10 0.860243 200 10 0.8816571 377 12 0.8739741 295 12 0.884285 420 12 0.8422131 180 8 0.7744231 162 11 0.5866667 32 2 0.881616 249 11 0.764389 221 11 0.8554268 236 12 0.924733 403 12 0.908428 417 12 0.837401 405 12 0.879442 483 12 0.937532 360 12 0.917317 0.7583558 0.830514 0.872885 0.809383 0.834848 0.877193 0.8580823 0.800649 0.878281 0.853120 0.8643140 0.8654551 0.8512552 0.871555 0.6794155 0.728065 0.827614 0.897989 0.8531864 0.786825 0.8379581 0.852802 0.798106 0.9408306 0.811526 0.790499 0.825400 0.821105 0.825205 0.8377103 0.864348 0.7982255 0.7474592 0.70836909 0.84256697 0.7578378 0.7799420 0.905115 0.868506 0.8685663 0.836361 0.906409 10 0.851313 0.850641 9.1177e-03 12 0.882607 0.875995 0.0066118 0.1680742 0.41784854 insignificant 1.00000 1.00000 insignificant 0.356480 0.4448129 insignificant 1 1 insignificant -0.01926769 0.413374 insignificant 1 insignificant 0.851264 0.8425926 0.0408664 12 0.872824 0.8225620 0.0502623 1.0699e-05 1.0029e-01 weaklyHypermeth 1.5733e-04 1.0000e+00 weaklyHypermeth 7.2770e-03 3.2438e-02 weaklyHypermeth 9.5750e-02 1.0000e+00 weaklyHypermeth 0.0580867 2.6687e-01 insignificant 1.0000e+00 insignificant 0.851124 0.902805 -0.0301890 12 0.805684 0.840025 -0.03434139 9.9984e-01 6.0120e-03 weaklyHypometh 1.0000e+00 2.8629e-01 insignificant 9.9995e-01 1.4309e-03 weaklyHypometh 1.0000e+00 1.5899e-01 insignificant -0.05529778 0.05983936 insignificant 1.000000 insignificant 0.850489 0.8425926 3.0687e-02 12 0.865662 0.8225620 0.0430995 5.1602e-04 5.8279e-02 weaklyHypermeth 6.5318e-03 1.0000e+00 weaklyHypermeth 3.6136e-02 8.4887e-02 weaklyHypermeth 3.7641e-01 1.00000000 insignificant 0.0773544 1.4020e-01 insignificant 1.0000e+00 insignificant 0.850489 0.903241 -0.0422271 12 0.865662 0.910028 -0.0443659 9.9987e-01 2.0519e-03 weaklyHypometh 1.0000e+00 2.2798e-01 insignificant 9.9963e-01 1.3961e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0360301 1.2723e-01 insignificant 1.0000000 insignificant 0.8425926 0.903241 -0.0708323 12 0.8225620 0.910028 -0.0874655 9.1364e-01 9.5029e-04 weaklyHypometh 1.0000e+00 1.3451e-02 weaklyHypometh 9.7902e-01 5.2766e-03 weaklyHypometh 1.0000e+00 9.0975e-02 weaklyHypometh -0.11338444 4.9777e-02 weaklyHypometh 5.9973e-01 insignificant chr15 72677150 72678150 47377 ARID3B ENSG00000179361 0.289865 739 11 0.4566153 387 11 0.405784 398 11 0.442214 629 11 0.578007 281 11 0.357391 831 11 0.597758 258 11 0.6022722 331 11 0.507030 301 11 0.408856 418 11 0.459204 443 11 0.309052 263 11 0.7058469 445 11 0.4005936 276 11 0.574738 535 11 0.3126635 195 11 0.524647 234 8 0.402902 1741 11 0.739825 582 11 0.363032 611 11 0.579073 252 11 0.3044257 335 11 0.539816 308 11 0.576810 185 15 0.522387 616 11 0.670858 486 11 0.327422 537 11 0.610196 176 11 0.398049 638 11 0.7165384 320 11 0.6469622 408 11 0.534249 635 11 0.0023148 419 11 0.0102407 582 11 0.0000000 479 7 0.000000 66 8 0.008028 440 11 0.0025847 715 11 0.274728 811 11 0.187606 693 11 0.303472 758 11 0.354551 871 11 0.323073 687 11 0.364569 0.4846795 0.502839 0.422541 0.569721 0.476438 0.636401 0.6965491 0.575709 0.537239 0.532451 0.4214004 0.7551171 0.4993929 0.620557 0.3841609 0.736646 0.461056 0.769972 0.5092423 0.581899 0.3601118 0.620422 0.590824 0.6194434 0.652566 0.438639 0.719486 0.430699 0.717056 0.6666340 0.611900 0.0038860 0.0059739 0.00084786 0.00083098 0.0152202 0.0040216 0.335576 0.229719 0.3557113 0.436722 0.321532 11 0.475349 0.534028 -3.8663e-02 11 0.389660 0.582301 -0.1926411 0.9997679 0.19624035 insignificant 1.00000 1.00000 insignificant 0.999991 0.0276089 weaklyHypometh 1 1 insignificant -0.06365065 0.193308 insignificant 1 insignificant 0.475445 0.0055535 0.4875239 11 0.441615 0.0035367 0.4380783 5.1392e-58 1.0000e+00 hypermethylated 8.5653e-56 1.0000e+00 hypermethylated 5.4646e-25 1.0000e+00 hypermethylated 2.7323e-22 1.0000e+00 hypermethylated 0.4680536 1.1953e-12 hypermethylated 1.4942e-10 hypermethylated 0.475974 0.240314 0.1679584 11 0.509556 0.311218 0.19833814 1.8775e-12 1.0000e+00 weaklyHypermeth 3.7551e-10 1.0000e+00 weaklyHypermeth 8.7667e-14 1.0000e+00 weaklyHypermeth 8.7667e-11 1.0000e+00 weaklyHypermeth 0.18322885 0.00052082 weaklyHypermeth 0.061713 weaklyHypermeth 0.533074 0.0055535 5.4275e-01 11 0.526608 0.0035367 0.5230716 5.2713e-57 1.0000e+00 hypermethylated 1.3178e-54 1.0000e+00 hypermethylated 4.8979e-23 1.0000e+00 hypermethylated 2.4490e-20 1.00000000 hypermethylated 0.5317042 2.1472e-08 hypermethylated 2.1472e-06 hypermethylated 0.533115 0.240314 0.2130908 11 0.530702 0.311218 0.2194842 5.4762e-16 1.0000e+00 hypermethylated 1.2152e-13 1.0000e+00 hypermethylated 2.5299e-13 1.0000e+00 hypermethylated 2.5299e-10 1.0000e+00 hypermethylated 0.2468795 1.1956e-04 hypermethylated 0.0597786 hypermethylated 0.0055576 0.240314 -0.2784831 11 0.0040808 0.311218 -0.3071368 1.0000e+00 1.9556e-40 hypomethylated 1.0000e+00 4.8889e-38 hypomethylated 1.0000e+00 2.2837e-15 hypomethylated 1.0000e+00 1.1418e-12 hypomethylated -0.28482471 5.4023e-04 hypomethylated 2.4556e-02 hypomethylated chr15 73109950 73110950 47385 PPCDC ENSG00000138621 0.832711 249 9 0.7285414 362 9 0.676201 327 9 0.857860 230 7 0.742737 142 9 0.758061 431 9 0.707552 203 9 0.7219041 360 9 0.785957 256 9 0.657367 212 9 0.681900 310 9 0.600205 88 8 0.8384239 262 9 0.8319547 114 7 0.776364 166 8 0.6910000 122 8 0.900794 39 3 0.746811 247 9 0.853217 262 9 0.777191 322 9 0.811824 148 8 0.7263431 83 6 0.706198 230 9 0.751256 117 8 0.613433 50 4 0.835997 377 9 0.750691 118 7 0.711096 94 6 0.752801 163 6 0.7462985 440 9 0.7434724 341 9 0.724318 419 10 0.7148468 290 10 0.5084188 109 9 0.7619577 417 6 0.651429 19 3 0.761356 243 9 0.6881350 332 9 0.871607 157 8 0.818333 185 9 0.768463 134 6 0.771052 110 6 0.750676 207 8 0.892390 0.8123877 0.709053 0.903442 0.830614 0.820936 0.778329 0.7975187 0.827648 0.837134 0.791228 0.6581511 0.8924326 0.8847155 0.801844 0.8457658 0.846686 0.871134 0.898548 0.8769266 0.817863 0.8411704 0.807480 0.824726 0.7609302 0.864280 0.792416 0.790546 0.900438 0.876584 0.8579973 0.838618 0.7817875 0.6333051 0.73807304 0.80248929 0.8259490 0.7586333 0.858116 0.897047 0.8228704 0.864662 0.857432 4 0.823767 0.851550 -5.2642e-03 9 0.721967 0.742769 -0.0208021 0.6026767 0.46835575 insignificant 1.00000 1.00000 insignificant 0.380627 0.7600859 insignificant 1 1 insignificant 0.01886030 0.430244 insignificant 1 insignificant 0.823767 0.8163121 0.0501995 9 0.721967 0.6831005 0.0388666 3.1628e-03 7.3619e-01 weaklyHypermeth 3.3292e-02 1.0000e+00 weaklyHypermeth 2.5357e-01 5.2819e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0773138 1.1020e-01 insignificant 1.0000e+00 insignificant 0.823767 0.814628 -0.0223247 9 0.721967 0.775212 -0.05324441 9.6931e-01 1.5601e-02 weaklyHypometh 1.0000e+00 6.2404e-01 insignificant 9.9329e-01 8.3416e-03 weaklyHypometh 1.0000e+00 3.9722e-01 insignificant -0.03768856 0.20924095 insignificant 1.000000 insignificant 0.851550 0.8163121 5.7534e-02 9 0.742769 0.6831005 0.0596687 1.9719e-02 9.7047e-01 weaklyHypermeth 1.7765e-01 1.0000e+00 insignificant 2.9574e-01 7.7666e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0584535 2.0631e-01 insignificant 1.0000e+00 insignificant 0.851550 0.814628 -0.0175379 9 0.742769 0.775212 -0.0324423 9.5109e-01 3.8341e-02 weaklyHypometh 1.0000e+00 9.1289e-01 insignificant 9.8945e-01 4.1516e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0565489 6.8616e-02 insignificant 1.0000000 insignificant 0.8163121 0.814628 -0.0874274 9 0.6831005 0.775212 -0.0921110 9.9613e-01 5.3011e-03 weaklyHypometh 1.0000e+00 5.7464e-02 weaklyHypometh 9.9531e-01 7.0123e-03 weaklyHypometh 1.0000e+00 1.1310e-01 insignificant -0.11500232 3.3220e-02 weaklyHypometh 4.4892e-01 insignificant chr15 73122650 73123650 47387 PPCDC ENSG00000138621 0.818038 176 11 0.6663017 247 11 0.750503 191 10 0.882297 164 8 0.750239 100 8 0.866105 330 10 0.764141 96 8 0.9061263 251 9 0.861736 139 7 0.924284 153 10 0.876615 406 11 0.626407 61 5 0.9337413 237 9 0.9112660 96 5 0.700258 219 9 0.6483135 40 4 0.573866 63 6 0.603998 188 8 0.924728 223 11 0.936286 262 10 0.817841 136 8 0.3963636 56 3 0.848613 171 9 0.848973 110 8 0.717045 48 3 0.876579 429 11 0.660463 162 8 0.762013 74 6 0.967690 268 9 0.9460224 541 11 0.9397524 464 11 0.961759 352 11 0.0033670 484 11 0.0063492 288 10 0.1025641 285 10 0.083333 25 3 0.014428 403 11 0.0082734 479 11 0.791104 112 11 0.654692 215 11 0.762295 104 9 0.628243 109 8 0.731975 90 8 0.838609 0.7762299 0.696707 0.863461 0.819150 0.896532 0.780694 0.8350450 0.792807 0.852387 0.832794 0.7466393 0.8850012 0.8195788 0.836667 0.5455495 0.495744 0.513608 0.911274 0.9181120 0.767464 0.5111164 0.907131 0.852480 0.6491329 0.896697 0.805704 0.711203 0.936194 0.922736 0.9279842 0.936490 0.0037214 0.0035240 0.04877725 0.12267590 0.0312129 0.0087348 0.703640 0.643231 0.7103682 0.515778 0.686982 2 0.819330 0.894699 -6.7587e-02 10 0.827547 0.903444 -0.0758973 0.9961363 0.00024522 weaklyHypometh 1.00000 0.24522 insignificant 0.964042 0.0239388 weaklyHypometh 1 1 insignificant -0.01566356 0.777904 insignificant 1 insignificant 0.819330 0.0147733 0.8012144 10 0.827547 0.0228273 0.8047195 8.8485e-99 1.0000e+00 hypermethylated 8.8485e-96 1.0000e+00 hypermethylated 3.7542e-24 1.0000e+00 hypermethylated 1.2514e-21 1.0000e+00 hypermethylated 0.7598768 2.7431e-17 hypermethylated 1.3715e-14 hypermethylated 0.819330 0.666667 0.1531469 10 0.827547 0.704116 0.12343040 9.8826e-11 9.9326e-01 weaklyHypermeth 1.6471e-08 1.0000e+00 weaklyHypermeth 6.0557e-06 9.9547e-01 weaklyHypermeth 8.6509e-04 1.0000e+00 weaklyHypermeth 0.08260070 0.07222037 insignificant 1.000000 insignificant 0.894699 0.0147733 8.7822e-01 11 0.903444 0.0228273 0.8806168 4.8142e-91 1.0000e+00 hypermethylated 4.8142e-88 1.0000e+00 hypermethylated 4.2165e-19 1.0000e+00 hypermethylated 1.4055e-16 1.00000000 hypermethylated 0.7755403 4.6575e-10 hypermethylated 6.6536e-08 hypermethylated 0.894699 0.666667 0.2262580 11 0.903444 0.704116 0.1993277 2.8860e-16 9.9971e-01 hypermethylated 9.6200e-14 1.0000e+00 hypermethylated 2.8163e-06 9.9082e-01 hypermethylated 4.6939e-04 1.0000e+00 hypermethylated 0.0982643 1.0345e-01 insignificant 1.0000000 insignificant 0.0147733 0.666667 -0.6452936 11 0.0228273 0.704116 -0.6812891 1.0000e+00 3.8656e-48 hypomethylated 1.0000e+00 3.8656e-45 hypomethylated 1.0000e+00 2.5225e-14 hypomethylated 1.0000e+00 8.4084e-12 hypomethylated -0.67727606 6.0526e-07 hypomethylated 2.0175e-04 hypomethylated chr15 73257350 73258350 47397 ENSG00000221713 0.065463 1575 36 0.0517749 1556 37 0.124358 1746 38 0.095705 1221 33 0.073519 1202 34 0.104473 1916 37 0.087386 1684 37 0.0888629 1414 36 0.067575 1690 37 0.072487 1599 37 0.070977 1420 37 0.057077 1544 37 0.0983022 1610 37 0.0709679 478 17 0.082743 1745 37 0.0302106 1300 37 0.038021 1105 31 0.093241 2050 33 0.084722 1516 37 0.092640 1791 37 0.117706 596 34 0.0487985 769 24 0.105703 1357 36 0.061246 580 34 0.100920 733 30 0.097768 1711 37 0.115210 979 37 0.093823 519 28 0.111044 1457 37 0.0584806 1992 37 0.0817919 1724 37 0.099212 1893 37 0.0605480 1250 37 0.0639515 1474 37 0.1296797 868 18 0.114300 371 21 0.114010 723 38 0.2890844 1414 36 0.154555 2114 37 0.120935 1691 35 0.095757 1247 31 0.121064 2137 34 0.155331 1483 33 0.070676 0.0468438 0.133044 0.055987 0.076657 0.085190 0.077046 0.0618306 0.043653 0.076382 0.092998 0.0597971 0.0805051 0.0630105 0.092332 0.0379332 0.047444 0.093723 0.055777 0.0481601 0.088860 0.0619993 0.062310 0.075391 0.0728315 0.113140 0.116490 0.067360 0.081471 0.069683 0.0603978 0.105458 0.0549009 0.0430484 0.10743085 0.09993852 0.0940318 0.2810911 0.120751 0.152090 0.0932591 0.077534 0.104000 28 0.080004 0.087014 -1.1352e-02 37 0.083886 0.117218 -0.0333322 0.9372878 0.17835956 insignificant 1.00000 1.00000 insignificant 0.864304 0.3074121 insignificant 1 1 insignificant -0.01344992 0.123227 insignificant 1 insignificant 0.079667 0.1223352 -0.0280832 37 0.083939 0.1305641 -0.0466256 5.6919e-01 3.3572e-08 weaklyHypometh 1.0000e+00 4.1964e-06 weaklyHypometh 2.4300e-01 4.4835e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0510703 1.9669e-01 insignificant 1.0000e+00 insignificant 0.080005 0.102410 -0.0394213 36 0.088018 0.140967 -0.05294826 9.9512e-01 3.3130e-20 weaklyHypometh 1.0000e+00 1.6565e-17 weaklyHypometh 9.9984e-01 4.7374e-11 weaklyHypometh 1.0000e+00 2.3687e-08 weaklyHypometh -0.05200315 0.00648556 weaklyHypometh 0.266028 insignificant 0.087011 0.1222951 -1.7590e-02 37 0.119299 0.1246294 -0.0053299 3.7077e-01 3.2400e-03 weaklyHypometh 1.0000e+00 2.4923e-01 insignificant 4.3736e-01 7.2129e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0376204 3.2568e-01 insignificant 1.0000e+00 insignificant 0.086884 0.102514 -0.0249882 36 0.097769 0.161420 -0.0636503 9.9775e-01 8.5278e-11 weaklyHypometh 1.0000e+00 4.2639e-08 weaklyHypometh 9.9821e-01 1.3225e-07 weaklyHypometh 1.0000e+00 6.6123e-05 weaklyHypometh -0.0385532 2.2332e-02 weaklyHypometh 0.8205141 insignificant 0.1222313 0.101987 -0.0169970 36 0.1256185 0.154904 -0.0292853 9.8741e-01 9.4384e-04 weaklyHypometh 1.0000e+00 1.3451e-02 weaklyHypometh 9.9997e-01 1.1696e-03 weaklyHypometh 1.0000e+00 2.7200e-02 weaklyHypometh -0.00093283 9.8015e-01 insignificant 1.0000e+00 insignificant chr15 73795950 73796950 47412 CSPG4 ENSG00000173546 0.962504 260 6 0.7441711 173 6 0.878377 131 6 0.923201 264 5 0.834034 72 6 0.925807 358 5 0.685897 76 4 0.9102286 180 6 0.888253 109 5 0.959832 109 4 0.863367 273 6 0.593333 25 4 0.8934467 168 4 0.9474747 92 4 0.934679 164 4 0.8333333 38 3 0.666667 11 0 0.929716 297 5 0.897491 196 4 0.902771 231 6 0.702020 51 5 0.8723810 60 4 0.820866 83 5 0.887311 98 5 0.893220 198 4 0.918732 270 6 0.873593 134 6 0.721584 68 4 0.882169 129 6 0.9186077 279 6 0.8816901 258 6 0.937825 248 6 0.5678805 239 6 0.7165828 153 6 0.6115081 162 3 0.603175 47 1 0.736607 108 5 0.6466845 260 6 0.781467 186 5 0.897188 188 6 0.933456 238 5 0.933114 199 4 0.877315 179 6 0.934426 0.8158446 0.828954 0.925420 0.865106 0.903273 0.830939 0.8906313 0.879558 0.947697 0.911348 0.8272549 0.9106471 0.9418182 0.916263 0.7957389 0.866884 0.889682 0.966954 0.9291487 0.897891 0.8506723 0.888035 0.959002 0.9009781 0.931997 0.907013 0.855032 0.923267 0.926310 0.9186081 0.927066 0.7193465 0.7620760 0.77816114 0.76359000 0.7883929 0.6791187 0.837960 0.948763 0.9479347 0.896273 0.913889 3 0.899907 0.900804 -7.5617e-03 5 0.845794 0.842831 0.0029630 0.9451409 0.59922020 insignificant 1.00000 1.00000 insignificant 0.681376 0.7743124 insignificant 1 1 insignificant -0.00043748 0.989145 lowCoverage 1 lowCoverage 0.899876 0.6315789 0.2174433 5 0.823764 0.5982830 0.2254814 6.5388e-11 7.8710e-01 hypermethylated 1.6347e-09 1.0000e+00 hypermethylated 1.6437e-04 8.9273e-01 hypermethylated 4.3255e-03 1.0000e+00 hypermethylated 0.2116562 5.0118e-05 lowCoverage 1.7282e-03 lowCoverage 0.900124 0.892929 -0.0010399 5 0.877725 0.862067 0.01565760 4.9144e-01 2.9236e-02 weaklyHypometh 1.0000e+00 7.4911e-01 insignificant 6.0195e-01 3.8248e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.02577893 0.49470444 lowCoverage 1.000000 lowCoverage 0.900751 0.6315789 2.2335e-01 6 0.820378 0.5982830 0.2220951 6.8977e-12 9.6329e-01 hypermethylated 2.3785e-10 1.0000e+00 hypermethylated 6.4761e-04 8.9019e-01 hypermethylated 1.2952e-02 1.00000000 hypermethylated 0.2120937 7.1107e-05 lowCoverage 2.6336e-03 lowCoverage 0.902098 0.892929 0.0083789 5 0.890441 0.862067 0.0283736 1.2406e-01 2.5877e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.4725e-01 6.2894e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0253415 4.9110e-01 insignificant 1.0000000 insignificant 0.6322314 0.892929 -0.2310604 5 0.6979968 0.862067 -0.1640706 9.9985e-01 2.9287e-06 hypomethylated 1.0000e+00 8.8747e-05 hypomethylated 1.0000e+00 5.0785e-04 hypomethylated 1.0000e+00 1.3726e-02 hypomethylated -0.23743516 1.9692e-04 lowCoverage 1.3127e-02 lowCoverage chr15 74257050 74258050 47422 C15orf27 ENSG00000169758 0.834204 254 5 0.8342059 276 7 0.651058 252 7 0.954404 237 4 0.796612 116 5 0.771639 392 7 0.843484 221 7 0.9146406 244 7 0.803754 222 6 0.844657 208 5 0.874674 265 7 0.735916 131 7 0.7950584 251 7 0.7854031 156 4 0.920847 300 7 0.8289171 144 5 0.823077 38 2 0.898918 274 5 0.705370 279 5 0.830335 216 7 0.767972 115 7 0.6724941 110 6 0.830927 210 7 0.639811 173 5 0.734613 79 4 0.878646 344 5 0.784403 203 7 0.711012 150 7 0.697486 241 5 0.8766035 426 7 0.8903221 255 7 0.794721 275 7 0.0463531 273 7 0.0538033 101 4 0.0019608 207 5 0.000000 30 2 0.102976 356 8 0.1424253 286 6 0.804731 228 5 0.806622 240 5 0.936446 224 5 0.770126 252 5 0.781944 189 7 0.894616 0.7611388 0.833377 0.931188 0.906631 0.917755 0.857787 0.8683306 0.833517 0.916105 0.841090 0.9059825 0.8826582 0.8671722 0.872160 0.8961575 0.779048 0.839811 0.866918 0.9187309 0.809603 0.8521756 0.930631 0.880975 0.8565857 0.876861 0.759687 0.899077 0.891838 0.903067 0.9065893 0.895016 0.0640610 0.0563398 0.00537262 0.00196256 0.0058086 0.0786190 0.887751 0.907167 0.9029794 0.866525 0.747585 5 0.862154 0.871368 -1.0507e-02 6 0.743563 0.696658 0.0469054 0.8302704 0.58713315 insignificant 1.00000 1.00000 insignificant 0.608942 0.8583808 insignificant 1 1 insignificant 0.04910765 0.109548 insignificant 1 insignificant 0.862316 0.0415004 0.8200288 5 0.774009 0.1404094 0.6335992 1.9222e-90 9.9855e-01 hypermethylated 9.6111e-88 1.0000e+00 hypermethylated 4.3521e-17 9.9998e-01 hypermethylated 1.0880e-14 1.0000e+00 hypermethylated 0.7644388 3.5803e-11 hypermethylated 2.9836e-09 hypermethylated 0.862316 0.867608 0.0036356 5 0.774009 0.777351 -0.00334261 6.3912e-01 3.1828e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.0216e-01 3.3532e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00238480 0.94631753 insignificant 1.000000 insignificant 0.872043 0.0415004 8.3069e-01 5 0.783740 0.1404094 0.6433306 1.4303e-65 9.8988e-01 hypermethylated 7.1513e-63 1.0000e+00 hypermethylated 3.8507e-14 9.9319e-01 hypermethylated 5.5010e-12 1.00000000 hypermethylated 0.7153311 2.8025e-12 hypermethylated 2.0843e-09 hypermethylated 0.872043 0.867608 0.0110083 5 0.783740 0.777351 0.0063888 4.1778e-01 4.9361e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.0516e-01 3.2268e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0467229 2.5524e-01 insignificant 1.0000000 insignificant 0.0415004 0.867608 -0.8193425 5 0.1404094 0.777351 -0.6369419 9.9984e-01 1.5238e-41 hypomethylated 1.0000e+00 7.6189e-39 hypomethylated 1.0000e+00 1.5317e-09 hypomethylated 1.0000e+00 2.9278e-07 hypomethylated -0.76205398 4.3622e-08 hypomethylated 2.1811e-05 hypomethylated chr15 75648650 75649650 47440 HMG20A ENSG00000140382 0.806914 321 10 0.5579002 315 11 0.430275 121 7 0.824058 397 10 0.640276 121 7 0.819475 369 11 0.731313 99 10 0.7388066 239 7 0.664632 109 3 0.638564 98 6 0.731557 321 10 0.928571 10 0 0.7704274 156 6 0.7448980 85 6 0.585538 71 2 0.8333333 16 0 0.583333 24 2 0.405997 425 8 0.794524 111 7 0.750546 237 7 0.828730 92 7 0.6316799 87 3 0.701036 152 10 0.717892 94 7 0.706480 208 11 0.789686 318 10 0.686891 98 6 0.736111 29 2 0.868976 157 7 0.6968031 375 10 0.6931382 300 10 0.822687 315 8 0.5831044 320 10 0.6073182 177 10 0.4623094 418 7 0.580556 75 5 0.599844 178 10 0.4218212 402 10 0.609728 301 10 0.554208 423 11 0.462648 406 10 0.305383 233 7 0.536366 326 11 0.825170 0.6687551 0.488192 0.827020 0.709269 0.863384 0.747531 0.7988104 0.793997 0.810750 0.846551 0.8402778 0.6314161 0.7524777 0.756724 0.6698884 0.643135 0.464657 0.757046 0.8188159 0.758058 0.4812963 0.809173 0.735076 0.7685144 0.782144 0.789492 0.912037 0.790981 0.812951 0.7733696 0.774434 0.5498458 0.6532334 0.69035948 0.39990434 0.5805871 0.4182268 0.540047 0.351490 0.3725269 0.277603 0.432813 2 0.736626 0.766187 -2.9258e-02 7 0.640239 0.699520 -0.0592810 0.9942125 0.28986056 insignificant 1.00000 1.00000 insignificant 0.995799 0.3692335 insignificant 1 1 insignificant -0.04096215 0.271438 insignificant 1 insignificant 0.737696 0.4403318 0.2607855 7 0.696132 0.4987104 0.1974211 2.7265e-15 8.0125e-01 hypermethylated 1.0906e-13 1.0000e+00 hypermethylated 7.3769e-07 8.9088e-01 hypermethylated 3.6885e-05 1.0000e+00 hypermethylated 0.1565549 3.1570e-03 weaklyHypermeth 7.0156e-02 weaklyHypermeth 0.737696 0.408526 0.3248743 7 0.696132 0.492439 0.20369297 1.3243e-15 9.9544e-01 hypermethylated 4.4143e-13 1.0000e+00 hypermethylated 1.0243e-09 9.9982e-01 hypermethylated 3.4144e-07 1.0000e+00 hypermethylated 0.20538054 0.01189536 weaklyHypermeth 0.396512 insignificant 0.765871 0.4407643 2.6061e-01 10 0.653292 0.5116301 0.1416617 6.4137e-16 9.3213e-01 hypermethylated 3.0541e-14 1.0000e+00 hypermethylated 2.1418e-06 9.9789e-01 hypermethylated 9.7355e-05 1.00000000 hypermethylated 0.1975171 5.7910e-04 weaklyHypermeth 1.7032e-02 weaklyHypermeth 0.766216 0.408526 0.3536230 7 0.707733 0.492439 0.2152943 1.3217e-20 9.9958e-01 hypermethylated 1.3217e-17 1.0000e+00 hypermethylated 2.0716e-10 1.0000e+00 hypermethylated 1.0358e-07 1.0000e+00 hypermethylated 0.2463427 6.4601e-03 weaklyHypermeth 0.4306733 insignificant 0.4403318 0.408526 0.0049113 7 0.4987104 0.492439 0.0062719 5.7222e-02 6.6382e-02 insignificant 1.0000e+00 5.2684e-01 insignificant 1.4104e-01 4.2641e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.04882562 4.5616e-01 insignificant 1.0000e+00 insignificant chr15 75701450 75702450 47443 HMG20A ENSG00000140382 0.451855 371 15 0.3377104 614 15 0.506087 365 16 0.452983 404 14 0.442358 311 16 0.576383 577 15 0.354952 344 15 0.4214442 481 16 0.413422 220 12 0.584798 237 13 0.532724 621 16 0.387781 165 12 0.3192457 464 15 0.5485516 259 12 0.468814 273 14 0.4242927 218 10 0.541287 256 6 0.567749 524 15 0.308650 736 15 0.582159 439 16 0.399313 258 16 0.5011779 239 13 0.424818 308 16 0.450665 177 16 0.577700 464 14 0.503384 721 16 0.494884 616 16 0.516455 147 13 0.499060 569 16 0.4601878 796 15 0.6156838 519 16 0.477560 417 15 0.6030039 461 15 0.4917301 351 16 0.5083899 218 8 0.542062 202 10 0.638165 349 16 0.7166962 528 15 0.583523 362 15 0.494545 386 15 0.586740 258 11 0.341596 284 12 0.575810 373 14 0.495500 0.3425444 0.486737 0.453332 0.430000 0.538011 0.369485 0.4032709 0.368747 0.549441 0.525361 0.3314923 0.2976028 0.4683068 0.421303 0.3168099 0.442697 0.480373 0.323704 0.5067591 0.364161 0.4384495 0.447309 0.505487 0.5315346 0.493591 0.437353 0.445581 0.514901 0.422491 0.5439543 0.483275 0.4933947 0.4658680 0.54945834 0.40687134 0.5734960 0.6107276 0.521130 0.443493 0.4997439 0.365032 0.519996 10 0.426355 0.483655 -4.2299e-02 16 0.443554 0.469324 -0.0257702 0.9916192 0.00281241 weaklyHypometh 1.00000 0.56248 insignificant 0.979918 0.0109758 weaklyHypometh 1 1 insignificant -0.03224513 0.236487 insignificant 1 insignificant 0.426336 0.5336812 -0.1003767 16 0.440234 0.6302599 -0.1900260 8.0335e-01 5.5770e-20 weaklyHypometh 1.0000e+00 2.7885e-17 weaklyHypometh 7.8561e-01 7.4177e-09 weaklyHypometh 1.0000e+00 1.8544e-06 weaklyHypometh -0.1221789 1.5241e-02 weaklyHypometh 2.6278e-01 insignificant 0.426336 0.472038 -0.0429846 14 0.440234 0.558637 -0.11840324 9.8903e-01 3.8575e-05 weaklyHypometh 1.0000e+00 7.7149e-03 weaklyHypometh 9.8124e-01 2.0549e-03 weaklyHypometh 1.0000e+00 2.0439e-01 insignificant -0.05528036 0.32391163 insignificant 1.000000 insignificant 0.483834 0.5336812 -5.6737e-02 16 0.482226 0.6302599 -0.1480340 4.0070e-01 2.3652e-13 weaklyHypometh 1.0000e+00 7.8842e-11 weaklyHypometh 6.1830e-01 5.9150e-06 weaklyHypometh 1.0000e+00 0.00147875 weaklyHypometh -0.0899338 5.2454e-02 insignificant 6.0433e-01 insignificant 0.483834 0.472038 -0.0079580 14 0.482226 0.558637 -0.0764112 6.4050e-01 1.8149e-02 weaklyHypometh 1.0000e+00 6.0336e-01 insignificant 7.6193e-01 4.6093e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0230352 6.6391e-01 insignificant 1.0000000 insignificant 0.5336812 0.472038 0.0576527 14 0.6302599 0.558637 0.0716228 4.8123e-04 7.0743e-01 weaklyHypermeth 5.4144e-02 1.0000e+00 weaklyHypermeth 8.8440e-03 7.5373e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.06689857 2.8732e-01 insignificant 1.0000e+00 insignificant chr15 75966850 75967850 47448 LINGO1 ENSG00000169783 0.913092 432 11 0.8005470 185 9 0.760998 192 9 0.897589 394 11 0.981481 53 6 0.894734 558 11 0.921634 101 7 0.9372969 198 9 0.843539 149 9 0.909169 152 9 0.879761 221 9 0.791249 74 8 0.8451219 216 9 0.8676413 86 6 0.840507 141 9 0.9531250 39 4 0.784925 68 6 0.778670 361 10 0.954475 136 9 0.916310 295 10 0.919895 101 9 0.8627369 187 9 0.857318 268 11 0.912915 89 7 0.925309 128 9 0.856253 308 11 0.940655 154 9 0.742276 86 7 0.871770 177 9 0.9132826 315 11 0.9175088 306 11 0.929979 395 11 0.3804230 263 9 0.2896361 162 9 0.4736842 174 7 0.073611 63 6 0.589091 182 9 0.1024646 465 11 0.884973 367 11 0.848664 414 11 0.858478 291 11 0.846203 424 11 0.879913 279 10 0.920940 0.7970796 0.752231 0.894942 0.985119 0.895209 0.928423 0.9163285 0.860892 0.915013 0.869713 0.8506944 0.8533658 0.8665578 0.850906 0.9382775 0.880847 0.812772 0.955382 0.9201910 0.920915 0.8577429 0.898859 0.880642 0.9115675 0.873193 0.921739 0.837465 0.891563 0.914424 0.9069655 0.927507 0.4626477 0.3489192 0.50614506 0.10700893 0.6831277 0.0360875 0.884855 0.858235 0.8587485 0.879395 0.907966 5 0.871637 0.898170 -2.4687e-02 11 0.852731 0.876246 -0.0235142 0.9729947 0.04332929 weaklyHypometh 1.00000 1.00000 insignificant 0.889051 0.2258146 insignificant 1 1 insignificant -0.01389815 0.524601 insignificant 1 insignificant 0.871637 0.3025210 0.5481170 11 0.852731 0.2917422 0.5609893 2.3226e-60 1.0000e+00 hypermethylated 4.6451e-58 1.0000e+00 hypermethylated 5.7301e-17 1.0000e+00 hypermethylated 1.1460e-14 1.0000e+00 hypermethylated 0.5554418 9.7729e-04 hypermethylated 2.5065e-02 hypermethylated 0.871789 0.856901 0.0052340 11 0.869646 0.862795 0.00685096 6.2191e-01 8.5517e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.5129e-01 9.9043e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00994750 0.55612278 insignificant 1.000000 insignificant 0.898170 0.3025210 5.8264e-01 11 0.876246 0.2917422 0.5845034 2.1542e-47 1.0000e+00 hypermethylated 3.0775e-45 1.0000e+00 hypermethylated 9.6083e-15 1.0000e+00 hypermethylated 1.7737e-12 1.00000000 hypermethylated 0.5693400 8.4360e-04 hypermethylated 2.3433e-02 hypermethylated 0.898447 0.856901 0.0279766 11 0.895298 0.862795 0.0325028 2.3439e-02 9.8836e-01 weaklyHypermeth 6.3348e-01 1.0000e+00 insignificant 6.3330e-02 9.9522e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0238457 1.9944e-01 insignificant 1.0000000 insignificant 0.3029141 0.856901 -0.5668426 11 0.3000824 0.862795 -0.5627131 1.0000e+00 1.1529e-25 hypomethylated 1.0000e+00 1.9214e-23 hypomethylated 1.0000e+00 5.4372e-10 hypomethylated 1.0000e+00 1.3593e-07 hypomethylated -0.54549432 1.1910e-03 weaklyHypometh 4.4112e-02 weaklyHypometh chr15 76052050 76053050 47450 ENSG00000214646 0.918227 127 7 0.8271027 138 7 0.768987 167 7 0.800133 115 6 0.873469 36 3 0.789611 191 6 0.854317 142 6 0.9220998 129 7 0.815614 161 6 0.806338 155 7 0.894535 181 7 0.670393 70 4 0.8954082 182 7 0.8801282 68 4 0.924150 123 6 0.7546366 52 4 0.794414 41 3 0.724263 140 7 0.933911 146 7 0.897731 193 7 0.871795 53 3 0.7678571 75 6 0.793932 106 7 0.853746 53 4 0.801646 64 6 0.886155 244 7 0.650781 72 5 0.829405 85 4 0.886883 125 6 0.9092016 254 7 0.8324225 203 7 0.870830 253 7 0.2138378 195 7 0.2315947 136 5 0.4250000 49 3 0.329524 49 5 0.316043 99 4 0.2966493 270 7 0.749852 133 5 0.695119 199 7 0.651273 78 4 0.738946 70 6 0.862803 115 7 0.912577 0.8490214 0.770018 0.804132 0.918693 0.835336 0.841006 0.9143846 0.810557 0.820295 0.886132 0.7183048 0.8818292 0.8634226 0.922644 0.6944849 0.812091 0.763897 0.931635 0.8840857 0.810488 0.7056738 0.798409 0.888515 0.8261890 0.880139 0.792320 0.852861 0.886428 0.909558 0.8530160 0.866293 0.3485111 0.2756180 0.57350608 0.35942863 0.4238433 0.3990295 0.798807 0.728677 0.5489658 0.744618 0.831106 2 0.843958 0.858586 -1.1907e-02 7 0.850018 0.851102 -0.0010839 0.6702258 0.44349847 insignificant 1.00000 1.00000 insignificant 0.661435 0.5582491 insignificant 1 1 insignificant 0.00771898 0.770897 insignificant 1 insignificant 0.843958 0.3170426 0.5134301 7 0.850018 0.2990943 0.5509242 9.1117e-54 9.9997e-01 hypermethylated 1.3017e-51 1.0000e+00 hypermethylated 1.5025e-14 1.0000e+00 hypermethylated 2.0695e-12 1.0000e+00 hypermethylated 0.5351653 3.1452e-07 hypermethylated 1.7474e-05 hypermethylated 0.843958 0.739496 0.1044821 7 0.850018 0.727087 0.12293190 2.0133e-06 9.9982e-01 weaklyHypermeth 1.8302e-04 1.0000e+00 weaklyHypermeth 3.8810e-03 9.9907e-01 weaklyHypermeth 2.7196e-01 1.0000e+00 insignificant 0.09767514 0.04735917 weaklyHypermeth 1.000000 insignificant 0.858586 0.3170426 5.3581e-01 7 0.851102 0.2990943 0.5520080 7.7195e-38 9.9999e-01 hypermethylated 8.5772e-36 1.0000e+00 hypermethylated 1.3005e-12 9.9999e-01 hypermethylated 1.6256e-10 1.00000000 hypermethylated 0.5274463 1.0823e-07 hypermethylated 7.7304e-06 hypermethylated 0.858586 0.739496 0.1160591 7 0.851102 0.727087 0.1240158 1.9774e-05 9.9999e-01 weaklyHypermeth 1.7977e-03 1.0000e+00 weaklyHypermeth 7.1965e-03 9.9698e-01 weaklyHypermeth 3.7876e-01 1.0000e+00 insignificant 0.0899562 6.4521e-02 insignificant 1.0000000 insignificant 0.3170426 0.739496 -0.3940712 7 0.2990943 0.727087 -0.4279923 9.9897e-01 2.7045e-15 hypomethylated 1.0000e+00 3.0050e-13 hypomethylated 9.9966e-01 8.3195e-07 hypomethylated 1.0000e+00 8.3195e-05 hypomethylated -0.43749017 9.7630e-06 hypomethylated 9.7630e-04 hypomethylated chr15 76858750 76859750 47472 CHRNB4 ENSG00000117971 0.830214 105 6 0.6278571 60 5 0.828386 56 5 0.929190 38 2 0.859524 53 5 0.760852 66 5 0.964286 32 3 0.8335601 43 5 0.871825 35 3 0.895000 31 5 0.791288 136 5 0.700000 23 2 0.7817308 63 4 1.0000000 1 0 0.716667 22 2 0.8166667 27 3 0.833333 18 3 0.714815 28 4 0.891182 81 5 0.662037 38 4 0.814286 21 2 0.8450000 22 3 0.782692 46 4 0.791667 8 0 0.534921 37 2 0.937231 86 4 0.800000 19 2 0.875000 7 0 0.879945 68 5 0.9314441 82 5 0.7949206 73 4 0.927619 95 5 0.3234432 97 5 0.2284382 103 5 0.4211874 75 4 0.269925 101 5 0.442208 35 4 0.3147307 128 4 0.839827 52 6 0.895370 87 6 0.777633 45 6 0.696429 41 5 0.662302 41 5 0.753077 0.6204004 0.752656 0.888167 0.883838 0.734710 0.924242 0.7687590 0.790404 0.901515 0.796788 0.6742424 0.8108246 NA 0.686869 0.7727273 0.825014 0.631650 0.893252 0.8282828 0.801587 0.8227273 0.722319 0.759351 0.4787157 0.916550 0.797980 0.828026 0.854375 0.910681 0.7770563 0.892424 0.2744755 0.2079183 0.33571004 0.19159642 0.2857930 0.2328828 0.736762 0.853535 0.7164502 0.602814 0.595779 0 0.819620 0.859680 -4.5579e-02 5 0.809848 0.908745 -0.0988971 0.9990516 0.08027701 insignificant 1.00000 1.00000 insignificant 0.991148 0.3709418 insignificant 1 1 insignificant -0.01080635 0.780157 lowCoverage 1 lowCoverage 0.819895 0.2727273 0.5422006 5 0.794223 0.4856851 0.3085376 6.1792e-26 9.5268e-01 hypermethylated 4.1195e-24 1.0000e+00 hypermethylated 4.6112e-09 9.9859e-01 hypermethylated 2.8820e-07 1.0000e+00 hypermethylated 0.4820987 4.8830e-07 lowCoverage 2.5700e-05 lowCoverage 0.820567 0.793233 0.0307998 5 0.836254 0.827306 0.00894803 2.2472e-01 7.6727e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.2028e-02 9.2362e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.04110856 0.42894237 lowCoverage 1.000000 lowCoverage 0.858929 0.2713755 6.0159e-01 5 0.895708 0.4122115 0.4834968 1.8867e-21 1.0000e+00 hypermethylated 1.1098e-19 1.0000e+00 hypermethylated 6.1859e-08 1.0000e+00 hypermethylated 3.8662e-06 1.00000000 hypermethylated 0.4929050 1.0083e-07 lowCoverage 7.7304e-06 lowCoverage 0.858676 0.792453 0.0807453 5 0.878326 0.798524 0.0798022 2.5464e-02 9.8767e-01 weaklyHypermeth 6.7010e-01 1.0000e+00 insignificant 3.5004e-02 9.9737e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.0519149 3.5843e-01 lowCoverage 1.0000000 lowCoverage 0.2718808 0.793233 -0.5026976 5 0.4836401 0.827306 -0.3436664 9.9934e-01 6.1673e-11 hypomethylated 1.0000e+00 3.8545e-09 hypomethylated 9.9983e-01 2.8347e-05 hypomethylated 1.0000e+00 1.5748e-03 hypomethylated -0.44099014 4.2994e-05 lowCoverage 3.3073e-03 lowCoverage chr15 77258150 77259150 47479 RASGRF1 ENSG00000058335 0.873026 146 3 0.3488686 128 5 0.350000 54 3 0.807310 130 5 0.547222 45 4 0.731972 98 5 0.606078 52 4 0.6428571 64 3 0.476190 19 2 0.951398 60 3 0.763053 149 5 0.540000 38 3 0.4181818 29 3 0.7142857 17 2 0.559259 29 2 0.0000000 12 0 NA 0 0 0.504532 327 3 0.500000 138 3 0.551647 60 3 0.747619 22 2 0.8461538 30 2 0.933333 22 3 0.779221 48 5 0.660516 235 5 0.668778 121 5 0.464286 16 2 1.000000 11 0 0.801515 83 3 0.5616823 120 5 0.4494490 166 5 0.738447 85 3 0.7578947 64 4 0.7709524 66 5 0.6000000 31 3 0.643728 113 5 0.772970 50 5 0.7882310 71 4 0.589951 156 3 0.849614 117 3 0.762671 134 3 0.760311 321 3 0.631394 170 5 0.834442 0.4269213 0.298611 0.897295 0.584491 0.675772 0.670956 0.4920635 0.594577 0.904990 0.853022 0.4000000 0.4696970 0.6765873 0.819753 0.0000000 NA 0.877075 0.601449 0.7060917 0.769180 0.8012821 0.856481 0.960317 0.7739642 0.769263 0.799603 1.000000 0.816540 0.638573 0.6172599 0.798046 0.8399123 0.8129630 0.43055556 0.90277778 0.9106125 0.9192708 0.889536 0.867224 0.9072004 0.819409 0.959630 2 0.672142 0.697602 -2.8866e-02 3 0.680797 0.530934 0.1498625 0.9550273 0.61554282 lowCoverage 1.00000 1.00000 lowCoverage 0.993914 0.0103610 lowCoverage 1 1 lowCoverage -0.14797556 0.044039 lowCoverage 1 lowCoverage 0.672142 0.7240506 -0.0898255 3 0.680797 0.7376238 -0.0568271 9.5177e-01 1.0460e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.8883e-01 5.8164e-03 lowCoverage 1.0000e+00 3.8776e-01 lowCoverage -0.1493549 1.9856e-02 lowCoverage 3.1518e-01 lowCoverage 0.672348 0.812918 -0.1169752 3 0.680797 0.704509 -0.02371203 7.7959e-01 1.3575e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.9323e-01 1.2210e-03 lowCoverage 1.0000e+00 1.5263e-01 lowCoverage -0.14584722 0.05247249 lowCoverage 1.000000 lowCoverage 0.698330 0.7233503 -5.8534e-02 5 0.637121 0.6851486 -0.0480275 6.9209e-01 1.1423e-02 weaklyHypometh 1.0000e+00 7.1393e-01 insignificant 6.2195e-01 2.1979e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0013793 9.8165e-01 lowCoverage 1.0000e+00 lowCoverage 0.698330 0.812709 -0.0878450 3 0.637121 0.645411 -0.0082894 6.1503e-01 1.8704e-02 lowCoverage 1.0000e+00 6.0336e-01 lowCoverage 4.0170e-01 3.6188e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0021283 9.7569e-01 lowCoverage 1.0000000 lowCoverage 0.7233503 0.812709 -0.0108316 3 0.6851486 0.645411 0.0397381 9.6239e-02 7.0909e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.4545e-02 5.1260e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.00350765 9.5298e-01 lowCoverage 1.0000e+00 lowCoverage chr15 77258350 77259350 47480 RASGRF1 ENSG00000058335 0.873026 146 3 0.3488686 128 5 0.350000 54 3 0.807310 130 5 0.547222 45 4 0.731972 98 5 0.606078 52 4 0.6428571 64 3 0.476190 19 2 0.951398 60 3 0.763053 149 5 0.540000 38 3 0.4181818 29 3 0.7142857 17 2 0.559259 29 2 0.0000000 12 0 NA 0 0 0.504532 327 3 0.500000 138 3 0.551647 60 3 0.747619 22 2 0.8461538 30 2 0.933333 22 3 0.779221 48 5 0.660516 235 5 0.668778 121 5 0.464286 16 2 1.000000 11 0 0.801515 83 3 0.5616823 120 5 0.4494490 166 5 0.738447 85 3 0.7578947 64 4 0.7709524 66 5 0.6000000 31 3 0.643728 113 5 0.772970 50 5 0.7882310 71 4 0.589951 156 3 0.849614 117 3 0.762671 134 3 0.760311 321 3 0.631394 170 5 0.834442 0.4269213 0.298611 0.897295 0.584491 0.675772 0.670956 0.4920635 0.594577 0.904990 0.853022 0.4000000 0.4696970 0.6765873 0.819753 0.0000000 NA 0.877075 0.601449 0.7060917 0.769180 0.8012821 0.856481 0.960317 0.7739642 0.769263 0.799603 1.000000 0.816540 0.638573 0.6172599 0.798046 0.8399123 0.8129630 0.43055556 0.90277778 0.9106125 0.9192708 0.889536 0.867224 0.9072004 0.819409 0.959630 2 0.672142 0.697602 -2.8866e-02 3 0.680797 0.530934 0.1498625 0.9550273 0.61554282 lowCoverage 1.00000 1.00000 lowCoverage 0.993914 0.0103610 lowCoverage 1 1 lowCoverage -0.14797556 0.044039 lowCoverage 1 lowCoverage 0.672142 0.7240506 -0.0898255 3 0.680797 0.7376238 -0.0568271 9.5177e-01 1.0460e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.8883e-01 5.8164e-03 lowCoverage 1.0000e+00 3.8776e-01 lowCoverage -0.1493549 1.9856e-02 lowCoverage 3.1518e-01 lowCoverage 0.672348 0.812918 -0.1169752 3 0.680797 0.704509 -0.02371203 7.7959e-01 1.3575e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.9323e-01 1.2210e-03 lowCoverage 1.0000e+00 1.5263e-01 lowCoverage -0.14584722 0.05247249 lowCoverage 1.000000 lowCoverage 0.698330 0.7233503 -5.8534e-02 5 0.637121 0.6851486 -0.0480275 6.9209e-01 1.1423e-02 weaklyHypometh 1.0000e+00 7.1393e-01 insignificant 6.2195e-01 2.1979e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0013793 9.8165e-01 lowCoverage 1.0000e+00 lowCoverage 0.698330 0.812709 -0.0878450 3 0.637121 0.645411 -0.0082894 6.1503e-01 1.8704e-02 lowCoverage 1.0000e+00 6.0336e-01 lowCoverage 4.0170e-01 3.6188e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0021283 9.7569e-01 lowCoverage 1.0000000 lowCoverage 0.7233503 0.812709 -0.0108316 3 0.6851486 0.645411 0.0397381 9.6239e-02 7.0909e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.4545e-02 5.1260e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.00350765 9.5298e-01 lowCoverage 1.0000e+00 lowCoverage chr15 79947650 79948650 47526 ENSG00000222992 0.899163 482 5 0.8424832 168 5 0.877922 80 5 0.933180 348 5 0.740741 72 5 0.724630 435 6 0.811987 118 5 0.6452381 134 5 0.570617 72 5 0.866667 56 5 0.705140 168 5 0.866667 44 5 0.8800000 57 5 0.9087302 80 5 0.873013 109 5 1.0000000 2 0 0.665017 619 3 0.858007 541 4 0.854437 111 5 0.585607 415 5 0.880000 26 2 0.9777778 29 3 0.861198 167 5 0.888515 77 5 0.864836 204 5 0.842394 167 5 0.649624 124 5 0.833333 24 3 0.814254 112 5 0.7015724 216 5 0.8978479 212 5 0.877521 325 5 0.7783955 136 5 0.7773254 131 5 0.7965758 279 5 0.777778 54 3 0.703197 113 5 0.5795275 230 5 0.879121 587 6 0.843082 307 6 0.952043 582 5 0.831826 475 5 0.875894 419 5 0.937112 0.9274521 0.923701 0.955978 0.960069 0.922107 0.886214 0.8591518 0.904563 0.968750 0.947123 0.9687500 0.9718750 0.9624256 0.954360 0.9508231 0.671487 0.922109 0.901985 0.9170594 0.970313 0.9670139 0.924558 0.927149 0.9206976 0.944611 0.868825 1.000000 0.913384 0.917519 0.9384119 0.938084 0.8473952 0.8498651 0.95275473 0.76074823 0.8687354 0.8455494 0.947653 0.919938 0.9488029 0.908774 0.929417 3 0.869618 0.887701 -4.2672e-02 5 0.704921 0.737252 -0.0323309 0.6526469 0.27683417 insignificant 1.00000 1.00000 insignificant 0.776483 0.5383258 insignificant 1 1 insignificant -0.03527737 0.346888 lowCoverage 1 lowCoverage 0.869618 0.8207847 0.0196337 5 0.704921 0.6491379 0.0557833 3.3138e-03 9.8481e-01 weaklyHypermeth 3.4519e-02 1.0000e+00 weaklyHypermeth 3.0930e-03 9.9987e-01 weaklyHypermeth 4.6165e-02 1.0000e+00 weaklyHypermeth 0.0699958 1.3127e-01 lowCoverage 1.0000e+00 lowCoverage 0.869671 0.939662 -0.0538151 5 0.686577 0.898276 -0.21169971 9.7202e-01 2.4194e-02 weaklyHypometh 1.0000e+00 6.7204e-01 insignificant 7.2713e-01 4.3555e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.07093100 0.05196559 lowCoverage 1.000000 lowCoverage 0.887701 0.8207847 6.8196e-02 5 0.737252 0.6491379 0.0881142 1.5417e-02 1.0000e+00 weaklyHypermeth 1.4824e-01 1.0000e+00 insignificant 2.6735e-03 1.0000e+00 weaklyHypermeth 4.2437e-02 1.00000000 weaklyHypermeth 0.1052731 3.0862e-02 lowCoverage 4.1149e-01 lowCoverage 0.887567 0.939662 -0.0133191 5 0.699717 0.898276 -0.1985596 9.9110e-01 2.1835e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.2598e-01 6.0448e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0356536 2.9770e-01 lowCoverage 1.0000000 lowCoverage 0.8205945 0.939662 -0.0763044 5 0.5990148 0.898276 -0.2992615 9.9999e-01 5.3018e-03 weaklyHypometh 1.0000e+00 5.7464e-02 weaklyHypometh 9.9998e-01 1.1117e-02 weaklyHypometh 1.0000e+00 1.6348e-01 insignificant -0.14092676 7.5597e-03 lowCoverage 1.6259e-01 lowCoverage chr15 79958250 79959250 47527 ENSG00000222992 0.742046 176 6 0.6798203 81 6 0.590513 94 6 0.686555 108 6 0.725397 48 6 0.668008 252 6 0.731481 88 6 0.7948232 79 6 0.743146 70 6 0.652819 72 6 0.697775 173 6 0.535348 82 6 0.6993465 128 6 NA 0 0 0.661538 79 6 0.7654300 83 6 0.792071 85 6 0.758157 130 6 0.756351 177 6 0.739245 297 6 0.689815 34 3 0.8787879 51 6 0.630592 114 6 0.773148 42 6 0.736111 45 3 0.699073 120 6 0.803263 69 6 0.760354 52 6 0.760190 82 6 0.7333737 155 6 0.7283561 173 6 0.685397 321 6 0.6362410 80 5 0.5662944 122 6 0.6068949 157 6 0.686169 73 6 0.738426 72 6 0.5918588 183 6 0.782057 223 6 0.715114 174 6 0.770013 147 6 0.742457 178 6 0.808201 140 6 0.751726 0.6617048 0.620769 0.687987 0.744622 0.650821 0.723180 0.7999935 0.708902 0.647483 0.697146 0.5153751 0.7350914 NA 0.652741 0.7689543 0.775553 0.760854 0.760322 0.7433730 0.784602 0.8432602 0.638827 0.747366 0.7306034 0.691590 0.786924 0.733216 0.743502 0.735693 0.7180225 0.692141 0.6219195 0.5593530 0.61642493 0.62491359 0.7500599 0.5744347 0.793626 0.710573 0.7646278 0.764331 0.798166 4 0.715465 0.718601 -6.5404e-03 6 0.710592 0.717118 -0.0065257 0.8513360 0.54241104 insignificant 1.00000 1.00000 insignificant 0.987758 0.1678272 insignificant 1 1 insignificant -0.03356282 0.171621 insignificant 1 insignificant 0.715465 0.6171761 0.0935642 6 0.710592 0.6227761 0.0878163 3.5651e-05 9.9996e-01 weaklyHypermeth 4.9515e-04 1.0000e+00 weaklyHypermeth 6.5446e-03 9.9908e-01 weaklyHypermeth 8.7262e-02 1.0000e+00 weaklyHypermeth 0.0686615 5.0908e-02 insignificant 6.2083e-01 insignificant 0.715465 0.767981 -0.0550815 6 0.710592 0.764101 -0.05350910 9.9850e-01 1.9678e-02 weaklyHypometh 1.0000e+00 6.3109e-01 insignificant 9.9897e-01 3.7291e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.05725952 0.02344862 weaklyHypometh 0.586216 insignificant 0.718601 0.6171761 1.0107e-01 6 0.717118 0.6227761 0.0943420 2.5240e-05 9.9991e-01 weaklyHypermeth 3.6937e-04 1.0000e+00 weaklyHypermeth 2.3241e-03 9.9991e-01 weaklyHypermeth 3.7485e-02 1.00000000 weaklyHypermeth 0.1022243 9.6079e-03 weaklyHypermeth 1.6856e-01 insignificant 0.718601 0.767981 -0.0505523 6 0.717118 0.764101 -0.0469834 9.9466e-01 3.0505e-02 weaklyHypometh 1.0000e+00 7.9542e-01 insignificant 9.5116e-01 2.7539e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0236967 3.4917e-01 insignificant 1.0000000 insignificant 0.6171761 0.767981 -0.1516836 6 0.6227761 0.764101 -0.1413254 1.0000e+00 9.1388e-07 weaklyHypometh 1.0000e+00 2.8559e-05 weaklyHypometh 1.0000e+00 1.7755e-04 weaklyHypometh 1.0000e+00 6.1223e-03 weaklyHypometh -0.12592105 3.4339e-03 weaklyHypometh 8.8237e-02 weaklyHypometh chr15 80097350 80098350 47537 ENSG00000222992 0.772566 121 4 0.6449404 283 5 0.795224 123 4 0.904679 159 5 0.847593 62 3 0.903903 281 5 0.916181 131 4 0.8880581 139 4 0.541030 88 4 0.864426 70 3 0.931218 259 5 0.833571 47 3 0.8230890 79 3 0.8247086 85 4 0.945986 88 3 0.8402056 68 3 1.000000 2 0 0.958156 115 4 0.732595 203 4 0.911407 179 5 0.958571 83 3 0.9750000 76 4 0.803265 114 5 0.927880 144 5 0.945221 128 4 0.910531 224 5 0.832471 47 4 0.671104 51 3 0.792203 265 3 0.9633707 281 5 0.9006534 288 5 0.879245 104 5 0.7052168 176 5 0.6295238 98 3 0.6285714 139 3 0.858880 159 3 0.650441 134 5 0.8714976 210 5 0.976595 153 4 0.932141 129 4 0.923016 108 3 0.974157 129 3 0.953943 114 5 0.885050 0.8967150 0.898771 0.926541 0.868328 0.928119 0.867888 0.8985524 0.852716 0.928507 0.933893 0.8422510 0.8828200 0.8625564 0.857771 0.8678085 0.979271 0.927899 0.945951 0.9157269 0.910485 0.9380734 0.866000 0.983499 0.9295034 0.934286 0.905205 0.704858 0.945043 0.970526 0.9308571 0.945804 0.8066523 0.7004369 0.89054431 0.87133663 0.6892426 0.9069384 0.962256 0.922439 0.8733435 0.978890 0.929537 3 0.892719 0.921884 -2.9789e-02 5 0.817434 0.837494 -0.0200604 0.9910937 0.04987849 weaklyHypometh 1.00000 1.00000 insignificant 0.981607 0.0324303 weaklyHypometh 1 1 insignificant -0.03598272 0.322734 lowCoverage 1 lowCoverage 0.892719 0.7740175 0.1011989 5 0.817434 0.6412485 0.1761853 2.0950e-06 9.9517e-01 weaklyHypermeth 3.4917e-05 1.0000e+00 weaklyHypermeth 4.2974e-03 9.9769e-01 weaklyHypermeth 5.9685e-02 1.0000e+00 weaklyHypermeth 0.1199551 5.0387e-02 lowCoverage 6.2083e-01 lowCoverage 0.893592 0.939968 -0.0397008 4 0.866635 0.957761 -0.09112611 9.9974e-01 3.7354e-03 lowCoverage 1.0000e+00 2.5578e-01 lowCoverage 9.9985e-01 3.4396e-03 lowCoverage 1.0000e+00 2.6459e-01 lowCoverage -0.10799337 0.00050836 lowCoverage 0.061713 lowCoverage 0.921884 0.7740175 1.4079e-01 5 0.837494 0.6412485 0.1962456 3.3391e-07 9.9949e-01 weaklyHypermeth 6.5473e-06 1.0000e+00 weaklyHypermeth 3.2903e-03 9.9828e-01 weaklyHypermeth 4.9502e-02 1.00000000 weaklyHypermeth 0.1559378 1.7789e-02 lowCoverage 2.6675e-01 lowCoverage 0.922352 0.939968 -0.0110277 4 0.904993 0.957761 -0.0527680 9.5262e-01 7.4650e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.9401e-01 5.1155e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0720107 2.2974e-02 lowCoverage 0.8205141 lowCoverage 0.7748634 0.939968 -0.1443991 4 0.7694982 0.957761 -0.1882627 9.9998e-01 1.6966e-05 lowCoverage 1.0000e+00 4.1382e-04 lowCoverage 9.9998e-01 4.9946e-04 lowCoverage 1.0000e+00 1.3726e-02 lowCoverage -0.22794843 3.6626e-03 lowCoverage 8.9332e-02 lowCoverage chr15 80185050 80186050 47540 MEX3B ENSG00000183496 0.849617 115 6 0.7468237 103 6 0.662755 74 6 0.897327 122 6 0.679422 43 6 0.639095 187 6 0.477778 36 4 0.7875000 99 6 0.592857 49 4 0.745833 42 6 0.781780 166 6 0.785714 8 0 0.7696970 65 6 0.6747253 66 6 0.588889 67 6 0.8750000 12 0 0.850000 16 0 0.906324 128 6 0.870047 78 6 0.733886 98 6 0.700680 41 6 0.7880952 47 6 0.847296 76 6 0.725446 54 5 0.799327 44 4 0.774370 126 6 0.778704 60 5 0.569444 26 2 0.708473 84 6 0.7689367 109 6 0.7306179 103 6 0.714423 158 6 0.4636973 99 6 0.7809868 90 6 0.8147805 135 6 0.458333 15 0 0.796032 53 6 0.8176280 115 6 0.843938 89 6 0.868129 95 6 0.808333 130 6 0.873754 62 6 0.684594 116 6 0.846952 0.7452773 0.606773 0.856329 0.791256 0.748463 0.489943 0.9148707 0.695690 0.751078 0.832586 0.9137931 0.7664577 0.8031167 0.604789 0.8706897 0.913793 0.831822 0.863841 0.7326118 0.817118 0.7998768 0.721884 0.791256 0.8004180 0.777113 0.791188 0.574234 0.705809 0.770953 0.7354441 0.788926 0.6188929 0.7529151 0.79049112 0.58182830 0.7846880 0.7905059 0.814728 0.867892 0.8096358 0.887599 0.796687 0 0.781449 0.773707 1.1233e-02 6 0.787404 0.771853 0.0155512 0.6240869 0.98601270 insignificant 1.00000 1.00000 insignificant 0.720422 0.9998229 insignificant 1 1 insignificant 0.00360236 0.913309 lowCoverage 1 lowCoverage 0.781110 0.7396450 0.0434347 6 0.743606 0.6338685 0.1097376 3.0780e-01 9.2975e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.8720e-02 9.2373e-01 weaklyHypermeth 4.7765e-01 1.0000e+00 insignificant 0.0571772 4.8259e-01 lowCoverage 1.0000e+00 lowCoverage 0.780691 0.829268 -0.0517960 6 0.706978 0.782885 -0.07590649 9.9738e-01 7.7004e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9486e-01 1.1838e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.06999602 0.14056325 lowCoverage 1.000000 lowCoverage 0.773564 0.7396450 3.0912e-02 6 0.720279 0.6338685 0.0864108 2.6778e-01 8.3218e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.3227e-01 9.4043e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0535749 5.0234e-01 insignificant 1.0000e+00 insignificant 0.772826 0.829268 -0.0635994 6 0.680319 0.782885 -0.1025657 9.9892e-01 2.9769e-03 weaklyHypometh 1.0000e+00 2.9769e-01 insignificant 9.9994e-01 7.0561e-03 weaklyHypometh 1.0000e+00 8.8202e-01 insignificant -0.0735984 1.1043e-01 insignificant 1.0000000 insignificant 0.7411067 0.829268 -0.0945174 6 0.7244212 0.782885 -0.0584638 9.9850e-01 3.5479e-03 weaklyHypometh 1.0000e+00 4.1740e-02 weaklyHypometh 9.9943e-01 8.8203e-03 weaklyHypometh 1.0000e+00 1.3570e-01 insignificant -0.12717323 1.5573e-01 insignificant 1.0000e+00 insignificant chr15 80188550 80189550 47541 MEX3B ENSG00000183496 0.920278 212 7 0.8693901 178 7 0.892262 111 7 0.949816 178 7 0.946429 51 2 0.823286 331 7 0.918457 54 7 0.9343537 173 7 0.759837 70 7 0.948052 125 7 0.940338 316 7 0.857576 35 5 0.9858188 215 7 0.9605042 136 7 0.960281 202 7 NA 0 0 NA 0 0 0.918701 248 7 0.927967 174 7 0.935947 241 7 0.969643 70 7 0.8592601 96 7 0.887755 126 7 0.692634 121 7 0.958333 63 7 0.934226 182 7 0.886710 233 7 0.625000 26 2 0.833707 222 7 0.8816935 163 7 0.9063625 161 7 0.889318 284 7 0.9371010 97 7 0.8491228 129 7 0.7920000 107 2 0.250000 4 0 0.749967 128 7 0.8283813 194 7 0.891712 95 7 0.857298 125 7 0.988095 116 7 0.888736 66 7 0.969926 205 7 0.856912 0.8219904 0.868772 0.952571 0.943548 0.835920 0.752102 0.8981311 0.787707 0.923684 0.925044 0.9616487 0.9825620 0.9400380 0.908430 NA NA 0.863729 0.919252 0.8316204 0.952535 0.8102335 0.883257 0.839089 0.9802867 0.894803 0.814248 0.761705 0.868242 0.893604 0.8388091 0.808015 0.9361377 0.9338993 0.89534191 NA 0.7133883 0.8533067 0.858113 0.950594 0.9767025 0.903019 0.922294 2 0.912787 0.877727 2.8550e-02 7 0.910896 0.780332 0.1305637 0.0029092 0.99913459 weaklyHypermeth 0.96972 1.00000 insignificant 0.053613 0.9644341 insignificant 1 1 insignificant 0.05346290 0.119448 insignificant 1 insignificant 0.912672 0.8801214 0.0164671 7 0.901985 0.7467921 0.1551932 1.8036e-02 9.8250e-01 weaklyHypermeth 1.6103e-01 1.0000e+00 insignificant 6.6497e-02 9.7778e-01 insignificant 6.1572e-01 1.0000e+00 insignificant 0.1794211 1.3407e-01 insignificant 1.0000e+00 insignificant 0.912787 0.945634 -0.0284344 7 0.910896 0.920438 -0.00954270 9.7510e-01 2.6998e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8167e-01 5.1972e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00530395 0.85827923 insignificant 1.000000 insignificant 0.878666 0.8801214 -1.5340e-02 7 0.825032 0.7467921 0.0782398 5.2753e-01 7.3974e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.3711e-01 9.0101e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.1259582 2.7427e-01 insignificant 1.0000e+00 insignificant 0.877727 0.945634 -0.0550420 7 0.780332 0.920438 -0.1401064 9.9986e-01 2.4171e-02 weaklyHypometh 1.0000e+00 7.2499e-01 insignificant 9.9981e-01 3.2559e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0587668 1.5516e-01 insignificant 1.0000000 insignificant 0.8801214 0.945545 -0.0494497 7 0.7467921 0.912482 -0.1656902 9.9911e-01 1.7792e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9906e-01 2.9586e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.18472506 1.2738e-01 insignificant 1.0000e+00 insignificant chr15 81824450 81825450 47576 BNC1 ENSG00000169594 0.065076 167 6 0.0075758 196 6 0.025856 229 6 0.025000 100 6 0.000000 136 6 0.106027 182 6 0.029886 238 6 0.0171958 179 6 0.020076 361 6 0.021977 205 6 0.034307 233 6 0.026600 281 6 0.0069444 219 6 NA 0 0 0.012932 316 6 0.0285792 200 6 0.010141 277 6 0.022222 65 6 0.021556 167 6 0.031264 264 6 0.066667 21 1 0.0303030 54 6 0.020929 189 6 0.055303 80 6 0.111111 27 3 0.032357 245 6 0.042468 103 6 0.083333 42 3 0.070833 117 6 0.0195137 260 6 0.0024155 293 6 0.029984 306 6 0.0175439 216 6 0.0000000 173 6 0.0000000 80 3 0.000000 74 6 0.033333 75 6 0.0221930 287 6 0.014512 181 6 0.027778 223 6 0.041667 72 6 0.016708 152 6 0.027778 71 6 0.061739 0.0069045 0.024045 0.022785 0.000000 0.107203 0.032238 0.0174804 0.020774 0.022694 0.033301 0.0264308 0.0072082 NA 0.014733 0.0320898 0.010649 0.025316 0.022907 0.0299715 0.060759 0.0276180 0.020971 0.057307 0.1075949 0.032840 0.041078 0.088608 0.064030 0.019539 0.0027518 0.028883 0.0159893 0.0000000 0.00000000 0.00000000 0.0303797 0.0207262 0.014002 0.025316 0.0379747 0.015006 0.025316 6 0.027646 0.029361 -1.0637e-03 6 0.028008 0.030650 -0.0026423 0.3664741 0.71921679 insignificant 1.00000 1.00000 insignificant 0.199649 0.1934792 insignificant 1 1 insignificant -0.02009012 0.070861 insignificant 1 insignificant 0.027646 0.0110497 0.0162845 6 0.028008 0.0163625 0.0116452 9.0259e-03 9.9168e-01 weaklyHypermeth 8.4355e-02 1.0000e+00 weaklyHypermeth 1.5765e-03 9.9934e-01 weaklyHypermeth 2.7181e-02 1.0000e+00 weaklyHypermeth 0.0148330 8.2834e-02 insignificant 9.4130e-01 insignificant 0.027646 0.018598 0.0091434 6 0.028008 0.024649 0.00335852 3.9827e-02 8.6137e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 1.5238e-02 5.6246e-01 weaklyHypermeth 6.0952e-01 1.0000e+00 insignificant 0.00132269 0.85787059 insignificant 1.000000 insignificant 0.029361 0.0110497 1.5205e-02 6 0.030650 0.0163625 0.0142875 2.3630e-02 9.9838e-01 weaklyHypermeth 2.0861e-01 1.0000e+00 insignificant 7.5770e-03 9.9990e-01 weaklyHypermeth 9.8403e-02 1.00000000 weaklyHypermeth 0.0349231 4.9529e-03 weaklyHypermeth 1.0108e-01 insignificant 0.029361 0.018598 0.0088604 6 0.030650 0.024649 0.0060008 9.1886e-02 9.5192e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.5020e-02 9.8358e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0214128 5.3638e-02 insignificant 1.0000000 insignificant 0.0110497 0.018598 -0.0057752 6 0.0163625 0.024649 -0.0082867 9.9970e-01 7.1606e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9995e-01 6.9918e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01351026 1.0875e-01 insignificant 9.8862e-01 insignificant chr15 82223150 82224150 47591 ENSG00000212374 0.799256 119 6 0.7850427 70 6 0.743981 40 5 0.867419 121 6 0.740410 53 6 0.769231 34 3 0.833333 11 0 0.8014448 77 6 0.690476 34 5 0.709259 28 3 0.789336 126 6 0.633333 11 0 0.7738095 43 6 0.9190476 34 6 0.776515 35 4 1.0000000 4 0 0.777778 9 0 0.801629 132 6 0.688889 59 6 0.866667 18 3 0.750000 8 0 0.8833333 19 2 0.808114 73 6 0.791005 43 6 0.700000 16 1 0.722345 89 6 0.696152 48 5 0.833333 18 1 0.734970 67 6 0.8928571 42 6 0.7563374 61 6 0.700000 49 3 0.7579365 41 6 0.7409091 36 4 0.6845238 39 4 0.300000 11 0 0.577778 43 5 0.7611111 53 6 0.823569 117 6 0.743047 161 6 0.813305 146 6 0.870274 74 6 0.800152 105 6 0.768014 0.7887821 0.632083 0.838094 0.707044 0.719856 0.850000 0.7620898 0.687500 0.755417 0.754021 0.7295954 0.7083333 0.8985714 0.674053 NA 0.777873 0.775897 0.675000 0.7983172 0.712697 0.8950000 0.774013 0.725397 0.7063957 0.675674 0.615426 0.750000 0.794464 0.841071 0.7932692 0.709951 0.7172619 0.7500000 0.60982143 0.39833333 0.5866667 0.7158333 0.783419 0.766279 0.7899607 0.758799 0.780606 0 0.803217 0.799250 -3.0155e-03 6 0.784361 0.727415 0.0569458 0.5406824 0.42385704 insignificant 1.00000 1.00000 insignificant 0.863673 0.2318134 insignificant 1 1 insignificant 0.01597223 0.564321 lowCoverage 1 lowCoverage 0.803605 0.6816143 0.1113238 6 0.795814 0.6852424 0.1105719 2.0297e-04 9.9713e-01 weaklyHypermeth 2.6360e-03 1.0000e+00 weaklyHypermeth 8.1100e-03 9.7134e-01 weaklyHypermeth 1.0532e-01 1.0000e+00 insignificant 0.1512998 9.4403e-02 lowCoverage 1.0000e+00 lowCoverage 0.802457 0.804312 -0.0191152 6 0.697210 0.821043 -0.12383339 9.8897e-01 6.6148e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7942e-01 7.6850e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02172650 0.44834402 lowCoverage 1.000000 lowCoverage 0.801512 0.6816143 1.1855e-01 6 0.803220 0.6852424 0.1179775 5.0668e-04 9.7552e-01 weaklyHypermeth 6.4959e-03 1.0000e+00 weaklyHypermeth 5.6140e-03 9.7499e-01 weaklyHypermeth 7.6904e-02 1.00000000 weaklyHypermeth 0.1353276 1.2632e-01 lowCoverage 1.0000e+00 lowCoverage 0.799250 0.803987 -0.0164819 6 0.727415 0.798673 -0.0712583 9.0631e-01 4.0634e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.6722e-01 7.7885e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0376987 2.1438e-01 lowCoverage 1.0000000 lowCoverage 0.6816143 0.804348 -0.1307522 6 0.6852424 0.814898 -0.1296553 9.9828e-01 3.0036e-03 weaklyHypometh 1.0000e+00 3.7082e-02 weaklyHypometh 9.2632e-01 2.1369e-02 weaklyHypometh 1.0000e+00 2.6381e-01 insignificant -0.17302630 6.4503e-02 lowCoverage 7.2831e-01 lowCoverage chr15 83459650 83460650 47639 PDE8A ENSG00000073417 0.949983 287 5 0.9600000 180 5 0.940000 46 5 0.960355 150 5 0.971429 35 5 0.887172 224 5 0.838889 30 1 0.9595960 46 5 0.933333 17 1 1.000000 18 1 0.871568 246 5 0.900000 10 0 0.9714286 34 5 0.9333333 32 5 0.945455 25 1 0.8000000 9 0 1.000000 1 0 0.928941 120 5 0.943056 79 5 0.947868 150 5 0.960000 39 5 1.0000000 6 0 0.939574 85 5 0.850000 19 0 0.983333 18 1 0.971650 177 5 0.977778 29 2 0.933333 11 0 0.948485 70 5 0.9483230 162 5 0.9783705 165 5 0.935933 240 5 0.8503953 101 5 0.9241758 69 5 0.9750000 20 1 1.000000 3 0 0.948947 103 5 0.9600000 174 5 0.945007 272 5 0.938166 302 5 0.936022 321 5 0.881934 97 5 0.929448 328 5 0.936308 0.9472222 0.955263 0.957775 0.977444 0.895428 0.858187 0.9471026 0.947368 1.000000 0.855130 0.9210526 0.9812030 0.9473684 0.885167 0.5789474 NA 0.884087 0.956689 0.9070337 0.915789 1.0000000 0.945414 0.901316 0.9599871 0.980125 0.982456 0.859649 0.935407 0.938575 0.9836551 0.918458 0.8280632 0.8591671 0.94736842 NA 0.9229917 0.9157895 0.944697 0.944508 0.9534780 0.877337 0.926713 0 0.928120 0.953967 -2.3930e-02 5 0.927902 0.952726 -0.0248241 0.9966885 0.02637076 weaklyHypometh 1.00000 1.00000 insignificant 0.959736 0.2462700 insignificant 1 1 insignificant -0.02011142 0.214574 lowCoverage 1 lowCoverage 0.928120 0.9382979 -0.0091104 5 0.927902 0.9328456 -0.0049435 2.9719e-01 2.3603e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 4.2897e-01 1.0190e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0109662 6.6044e-01 lowCoverage 1.0000e+00 lowCoverage 0.928120 0.931818 -0.0035067 5 0.927902 0.931715 -0.00381292 5.4105e-01 5.5907e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.4491e-03 9.8999e-01 inconclusive 3.9206e-01 1.0000e+00 insignificant 0.00600500 0.71321383 lowCoverage 1.000000 lowCoverage 0.953967 0.9382979 1.4035e-02 5 0.952726 0.9328456 0.0198805 3.1930e-02 6.1408e-02 weaklyHypermeth 2.7291e-01 1.0000e+00 insignificant 3.5459e-01 3.6388e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0091453 7.1287e-01 lowCoverage 1.0000e+00 lowCoverage 0.953967 0.931818 0.0231762 5 0.952726 0.931715 0.0210111 5.6297e-03 9.6920e-01 weaklyHypermeth 2.4477e-01 1.0000e+00 insignificant 8.3447e-05 9.9953e-01 weaklyHypermeth 9.2719e-03 1.0000e+00 weaklyHypermeth 0.0261164 1.2660e-01 lowCoverage 1.0000000 lowCoverage 0.9382979 0.931818 0.0070696 5 0.9328456 0.931715 0.0011306 1.2541e-03 2.4721e-01 weaklyHypermeth 1.2541e-01 1.0000e+00 insignificant 2.2176e-03 7.8251e-01 weaklyHypermeth 4.4353e-01 1.0000e+00 insignificant 0.01697115 5.0199e-01 lowCoverage 1.0000e+00 lowCoverage chr15 86097550 86098550 47733 ENSG00000219654 0.886017 117 7 0.7082360 255 7 0.700281 104 7 0.830556 111 7 0.679495 85 7 0.879713 148 7 0.624446 126 7 0.6516533 163 7 0.679344 110 7 0.663877 116 7 0.565730 260 7 0.698413 69 7 0.6628975 126 7 0.6510771 92 7 0.715950 94 7 0.6071429 25 1 0.565037 367 4 0.831335 106 7 0.813544 245 7 0.761718 160 7 0.521350 48 3 0.8660043 56 3 0.810410 148 7 0.698622 75 7 0.869780 41 4 0.852632 266 7 0.576531 117 7 0.460827 60 7 0.700832 181 7 0.7404747 248 7 0.7334120 240 7 0.773388 111 6 0.7836155 177 7 0.9206147 109 7 0.7099567 146 7 0.633333 27 4 0.746167 174 7 0.6086537 235 7 0.862113 198 7 0.870580 155 7 0.644361 128 7 0.677991 110 7 0.879807 125 7 0.879799 0.7410626 0.637659 0.846118 0.796119 0.877127 0.666900 0.7664911 0.655072 0.720030 0.744134 0.7224932 0.7465607 0.6777487 0.749652 0.5500000 0.641504 0.817188 0.822415 0.7880572 0.698288 0.8391253 0.823483 0.817519 0.8454034 0.834365 0.625223 0.554533 0.698922 0.771974 0.8003977 0.794972 0.7837730 0.9300875 0.73850702 0.55327893 0.7560053 0.5988698 0.848516 0.865110 0.7376426 0.770148 0.875080 3 0.765196 0.787555 -3.3459e-03 7 0.618100 0.636085 -0.0179851 0.0678003 0.10393756 insignificant 1.00000 1.00000 insignificant 0.754825 0.3891984 insignificant 1 1 insignificant -0.00819871 0.856042 insignificant 1 insignificant 0.766574 0.7119816 0.0481091 7 0.746811 0.7329152 0.0138955 7.1249e-03 3.1912e-01 weaklyHypermeth 6.8509e-02 1.0000e+00 weaklyHypermeth 4.7020e-01 8.5592e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0249004 6.3900e-01 insignificant 1.0000e+00 insignificant 0.766388 0.815642 -0.0417062 7 0.715959 0.731112 -0.01515309 8.1167e-01 1.6961e-02 weaklyHypometh 1.0000e+00 6.3109e-01 insignificant 8.1404e-01 5.8632e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.07814748 0.21686484 insignificant 1.000000 insignificant 0.790742 0.7119816 6.5138e-02 7 0.744461 0.7329152 0.0115455 5.4313e-02 3.3376e-01 insignificant 4.4519e-01 1.0000e+00 insignificant 3.7230e-01 3.1691e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0167017 7.8695e-01 insignificant 1.0000e+00 insignificant 0.791139 0.815642 -0.0214083 7 0.776403 0.731112 0.0452907 9.4015e-01 1.7786e-02 weaklyHypometh 1.0000e+00 6.0336e-01 insignificant 6.9062e-01 1.4562e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0699488 3.0885e-01 insignificant 1.0000000 insignificant 0.7119816 0.817927 -0.0902876 7 0.7329152 0.835557 -0.1026419 9.9868e-01 2.7289e-02 weaklyHypometh 1.0000e+00 2.4150e-01 insignificant 9.7174e-01 2.4152e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.05324708 4.6292e-01 insignificant 1.0000e+00 insignificant chr15 87361550 87362550 47757 ENSG00000214448 0.227907 319 8 0.1385997 430 8 0.133537 513 8 0.163231 249 8 0.136570 277 8 0.227356 445 8 0.154659 476 8 0.1514347 467 8 0.240613 636 8 0.176490 453 8 0.220269 336 8 0.128979 397 8 0.0805507 519 8 0.2782738 154 4 0.118254 546 8 0.0601149 440 8 0.193839 523 8 0.174559 301 8 0.143949 278 8 0.161600 427 8 0.144272 104 8 0.2013939 213 8 0.174117 330 8 0.106803 153 8 0.304046 80 5 0.142249 481 8 0.122616 181 8 0.198177 141 8 0.149773 430 8 0.1033533 634 8 0.1373464 520 8 0.189545 490 8 0.0152603 490 8 0.0058784 282 8 0.1103896 163 7 0.000000 38 5 0.027069 174 8 0.0268806 530 8 0.140546 371 8 0.187983 366 8 0.138850 250 8 0.166182 240 8 0.127811 283 8 0.199195 0.1149281 0.107352 0.139987 0.119047 0.207314 0.124399 0.1299278 0.128709 0.152221 0.186344 0.1076234 0.0735585 0.1470637 0.105154 0.0549836 0.171227 0.146563 0.126884 0.1418275 0.143656 0.0916817 0.155014 0.080534 0.2571891 0.126713 0.103604 0.083322 0.128468 0.093522 0.1175009 0.163031 0.0163607 0.0078339 0.05459025 0.00000000 0.0287028 0.0241635 0.135742 0.174561 0.1125329 0.150917 0.116583 8 0.115075 0.108065 1.0405e-02 8 0.251647 0.210757 0.0408899 0.2016788 0.91623279 insignificant 1.00000 1.00000 insignificant 0.224487 0.9640473 insignificant 1 1 insignificant 0.00106495 0.957915 insignificant 1 insignificant 0.114966 0.0232558 0.1012657 8 0.158103 0.0274515 0.1306516 1.7999e-14 8.8240e-01 weaklyHypermeth 6.4282e-13 1.0000e+00 weaklyHypermeth 6.8100e-10 9.9997e-01 weaklyHypermeth 5.6750e-08 1.0000e+00 weaklyHypermeth 0.1346263 4.0363e-05 weaklyHypermeth 1.4416e-03 weaklyHypermeth 0.114966 0.174834 0.0020996 8 0.158103 0.148032 0.01007159 1.9631e-01 9.5509e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 3.4493e-01 9.8064e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01326478 0.42781556 insignificant 1.000000 insignificant 0.107381 0.0232558 9.1017e-02 8 0.143352 0.0274515 0.1159005 5.6739e-14 9.6964e-01 weaklyHypermeth 2.3641e-12 1.0000e+00 weaklyHypermeth 2.3937e-07 9.9975e-01 weaklyHypermeth 1.4081e-05 1.00000000 weaklyHypermeth 0.1335614 5.2978e-05 weaklyHypermeth 2.0376e-03 weaklyHypermeth 0.107381 0.174834 -0.0085742 8 0.143352 0.148032 -0.0046796 4.7883e-01 1.2187e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.5720e-01 1.2919e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0121998 5.3672e-01 insignificant 1.0000000 insignificant 0.0232558 0.174834 -0.1143631 8 0.0274515 0.148032 -0.1205800 9.9714e-01 5.6087e-10 weaklyHypometh 1.0000e+00 2.9519e-08 weaklyHypometh 9.9996e-01 1.7558e-05 weaklyHypometh 1.0000e+00 1.0328e-03 weaklyHypometh -0.12136155 2.3628e-04 weaklyHypometh 1.3127e-02 weaklyHypometh chr15 88190150 88191150 47774 ANPEP ENSG00000166825 0.828100 116 6 0.7826281 152 5 0.820525 78 5 0.948395 81 5 0.726316 93 6 0.816169 143 7 0.870435 106 5 0.8255639 81 5 0.790704 111 7 0.719671 125 7 0.739690 199 7 0.777311 75 4 0.6530399 131 6 0.8387446 55 5 0.766789 101 5 0.8681319 57 4 0.752092 130 7 0.786487 108 7 0.797241 102 7 0.739725 201 7 0.582793 71 6 0.7116899 95 6 0.729777 105 5 0.772161 78 6 0.790909 49 6 0.804869 208 5 0.803992 86 5 0.712613 112 6 0.807761 102 7 0.7701389 118 5 0.7571411 173 7 0.836328 208 7 0.7455269 198 7 0.6045996 75 6 0.5688776 169 5 0.814286 24 4 0.710476 121 6 0.7921485 139 7 0.906646 116 5 0.839351 106 7 0.808333 80 5 0.928030 100 4 0.858844 104 6 0.742369 0.6815379 0.726276 0.934449 0.674890 0.766229 0.809283 0.7674651 0.695430 0.669494 0.664324 0.6827984 0.7034235 0.7542088 0.766258 0.8092187 0.645124 0.857166 0.717576 0.7077218 0.662609 0.6722515 0.591697 0.678830 0.7869665 0.785496 0.703444 0.688936 0.751542 0.749466 0.6766267 0.748795 0.7171580 0.6474820 0.63287706 0.77179487 0.6566453 0.7030907 0.840998 0.872253 0.7942613 0.877076 0.780619 5 0.744321 0.726690 1.4469e-02 6 0.779380 0.760047 0.0193328 0.2847153 0.85351473 insignificant 1.00000 1.00000 insignificant 0.149243 0.9811442 insignificant 1 1 insignificant 0.03570669 0.154666 insignificant 1 insignificant 0.744321 0.6887052 0.0541128 6 0.779380 0.7071075 0.0722724 3.2398e-04 9.8959e-01 weaklyHypermeth 3.9997e-03 1.0000e+00 weaklyHypermeth 3.9771e-03 9.9300e-01 weaklyHypermeth 5.6016e-02 1.0000e+00 weaklyHypermeth 0.0864021 9.0284e-02 insignificant 9.7080e-01 insignificant 0.744321 0.839921 -0.0962662 5 0.779380 0.855832 -0.07645183 9.9460e-01 2.9367e-03 weaklyHypometh 1.0000e+00 2.4472e-01 insignificant 9.9965e-01 4.4162e-03 weaklyHypometh 1.0000e+00 2.7601e-01 insignificant -0.07585298 0.02023363 weaklyHypometh 0.563495 insignificant 0.726690 0.6887052 3.8663e-02 6 0.760047 0.7071075 0.0529396 3.3072e-02 9.0659e-01 weaklyHypermeth 2.8016e-01 1.0000e+00 insignificant 1.1182e-01 9.1134e-01 insignificant 9.8957e-01 1.00000000 insignificant 0.0506955 2.9687e-01 insignificant 1.0000e+00 insignificant 0.726690 0.839921 -0.1119133 5 0.760047 0.855832 -0.0957846 9.9952e-01 2.0130e-04 weaklyHypometh 1.0000e+00 5.0325e-02 weaklyHypometh 9.9999e-01 2.2051e-04 weaklyHypometh 1.0000e+00 7.3504e-02 weaklyHypometh -0.1115597 3.1578e-03 weaklyHypometh 0.3560056 insignificant 0.6887052 0.839921 -0.1475184 5 0.7071075 0.855832 -0.1487242 1.0000e+00 1.7778e-05 weaklyHypometh 1.0000e+00 4.2220e-04 weaklyHypometh 1.0000e+00 3.0061e-04 weaklyHypometh 1.0000e+00 8.9041e-03 weaklyHypometh -0.16225512 8.8127e-03 weaklyHypometh 1.7985e-01 insignificant chr15 88378450 88379450 47777 ZNF710 ENSG00000140548 0.662611 209 3 0.4636389 157 5 0.534963 121 5 0.685102 200 3 0.616508 54 3 0.850476 191 5 0.662704 40 3 0.7171614 143 5 0.721501 97 3 0.817561 70 3 0.699377 143 5 0.600037 67 2 0.6244192 143 4 0.8514286 71 3 0.716837 104 3 0.6297619 43 4 0.833333 5 0 0.658502 181 4 0.708668 179 5 0.724551 150 4 0.661111 31 3 0.4724339 66 4 0.770055 94 5 0.466667 46 3 0.706123 64 5 0.728977 142 5 0.747344 140 5 0.262500 41 2 0.529781 96 3 0.6474515 160 3 0.6078071 164 4 0.822234 172 5 0.4386809 139 5 0.6396204 78 3 0.4285714 54 3 0.900000 16 3 0.476951 106 5 0.4190017 216 5 0.781737 108 3 0.499954 144 3 0.660135 196 3 0.489123 52 3 0.679643 126 4 0.734982 0.6126175 0.517673 0.769888 0.571832 0.706723 0.727728 0.6593737 0.553710 0.761820 0.753341 0.5990476 0.4805611 0.7387057 0.666552 0.7912836 0.843306 0.658826 0.591939 0.7215415 0.960470 0.5414336 0.789718 0.655606 0.5818771 0.659597 0.720848 0.536989 0.602452 0.633484 0.7994771 0.777288 0.3575575 0.8460098 0.23245216 0.77380444 0.6419673 0.1401517 0.763463 0.756071 0.6206630 0.537416 0.652566 2 0.688108 0.712757 -3.3625e-02 3 0.481032 0.514343 -0.0333112 0.9977972 0.37528277 lowCoverage 1.00000 1.00000 lowCoverage 0.953685 0.8471620 lowCoverage 1 1 lowCoverage 0.07041666 0.189688 lowCoverage 1 lowCoverage 0.688108 0.4581281 0.2189667 3 0.481032 0.5297806 -0.0487489 2.9774e-06 8.6625e-01 lowCoverage 4.8810e-05 1.0000e+00 lowCoverage 6.1395e-02 9.2974e-01 lowCoverage 5.8391e-01 1.0000e+00 lowCoverage 0.1384860 1.3805e-01 lowCoverage 1.0000e+00 lowCoverage 0.688691 0.733227 -0.0234689 3 0.673444 0.653279 0.02016557 3.7088e-01 4.8979e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 1.6215e-01 7.9383e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.06683853 0.31558804 lowCoverage 1.000000 lowCoverage 0.712757 0.4581281 2.5625e-01 5 0.514343 0.5297806 -0.0154377 2.7612e-06 8.4410e-01 hypermethylated 4.6801e-05 1.0000e+00 hypermethylated 1.4255e-01 8.7797e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0680694 4.7069e-01 lowCoverage 1.0000e+00 lowCoverage 0.715702 0.733227 0.0090628 3 0.720080 0.653279 0.0668013 1.9293e-01 8.5249e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 2.9906e-01 8.1224e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0035781 9.6174e-01 lowCoverage 1.0000000 lowCoverage 0.4570957 0.733227 -0.2427166 3 0.4416928 0.653279 -0.2115859 6.4863e-01 4.6989e-03 lowCoverage 1.0000e+00 5.3397e-02 lowCoverage 7.4072e-01 3.3183e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.07164749 4.7368e-01 lowCoverage 1.0000e+00 lowCoverage chr15 88486650 88487650 47784 ENSG00000222141 0.506693 133 3 0.3752153 71 3 0.412869 199 5 0.727121 134 3 0.512281 200 3 0.483070 182 5 0.462531 120 5 0.4706767 104 5 0.403906 208 5 0.497868 221 5 0.505985 205 5 0.474843 84 5 0.3505882 189 3 0.4158730 56 3 0.428805 138 3 0.8911765 61 3 0.375385 62 3 0.453521 103 3 0.659310 211 3 0.424028 195 5 0.418269 58 3 0.4436630 73 5 0.594010 89 5 0.790483 86 3 0.548718 44 3 0.398333 105 5 0.485798 76 5 0.515000 29 3 0.507692 79 3 0.4508428 100 5 0.4012129 94 3 0.476494 183 5 0.6856033 81 5 0.8901144 105 3 0.6428571 18 1 0.458333 15 1 0.794101 115 5 0.8184416 53 3 0.675435 97 3 0.700684 116 3 0.674156 119 3 0.646518 84 3 0.562256 107 3 0.601450 0.5354767 0.529243 0.634941 0.605006 0.641067 0.569595 0.5867209 0.570249 0.666354 0.607644 0.6327658 0.4752112 0.5989160 0.550176 0.8340507 0.515322 0.660598 0.554976 0.5348617 0.590095 0.5741088 0.666156 0.644286 0.5722326 0.574051 0.612400 0.710366 0.654576 0.570238 0.5585596 0.702091 0.7515808 0.8977064 0.81973372 0.65968102 0.9139200 0.6343681 0.572563 0.617134 0.5677894 0.538311 0.635147 3 0.591794 0.532480 -2.3358e-02 5 0.455016 0.472088 -0.0170719 0.7216631 0.02220871 weaklyHypometh 1.00000 1.00000 insignificant 0.827188 0.0313567 weaklyHypometh 1 1 insignificant -0.01095576 0.799555 lowCoverage 1 lowCoverage 0.591794 0.7906977 -0.1225130 4 0.455016 0.7218984 -0.2668823 7.6443e-01 5.7101e-11 lowCoverage 1.0000e+00 9.5168e-09 lowCoverage 9.0214e-01 2.2155e-04 lowCoverage 1.0000e+00 2.7694e-02 lowCoverage -0.2233212 1.4080e-02 lowCoverage 2.5144e-01 lowCoverage 0.591794 0.531549 0.0088787 3 0.455016 0.542458 -0.08744231 6.5563e-01 1.4672e-03 lowCoverage 1.0000e+00 1.6303e-01 lowCoverage 6.2481e-01 9.1497e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.16022259 0.00055541 lowCoverage 0.061713 lowCoverage 0.532480 0.7906977 -1.1048e-01 4 0.472088 0.7218984 -0.2498104 1.9261e-01 4.5375e-08 lowCoverage 1.0000e+00 9.0750e-06 lowCoverage 5.9538e-01 4.8778e-03 lowCoverage 1.0000e+00 0.65999051 lowCoverage -0.2123655 1.7873e-02 lowCoverage 2.6675e-01 lowCoverage 0.532480 0.531549 0.0247605 3 0.472088 0.542458 -0.0703704 4.1890e-01 1.4371e-02 lowCoverage 1.0000e+00 6.0336e-01 lowCoverage 2.2127e-01 3.2925e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.1492668 1.9414e-03 lowCoverage 0.3560056 lowCoverage 0.7906977 0.531549 0.0588057 3 0.7218984 0.542458 0.1794400 4.5988e-02 2.6768e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 5.5578e-02 8.8259e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.06309865 3.8411e-01 lowCoverage 1.0000e+00 lowCoverage chr15 88585450 88586450 47792 C15orf58 ENSG00000183208 0.872322 189 9 0.7495077 211 8 0.778982 313 8 0.896530 147 7 0.749066 196 8 0.631974 262 9 0.868943 247 8 0.7795564 196 8 0.808338 275 8 0.781872 254 9 0.803103 327 8 0.768339 220 9 0.7917740 245 8 0.7365942 120 4 0.806410 305 8 0.7528271 195 8 0.754588 108 5 0.895859 214 6 0.861568 307 8 0.926126 227 8 0.868420 123 8 0.7214547 97 5 0.809023 216 9 0.940239 202 9 0.936508 54 4 0.944212 210 8 0.901861 181 8 0.888819 209 8 0.787421 180 8 0.9154728 252 9 0.9321953 177 8 0.831720 311 9 0.7519682 222 8 0.7081996 152 8 0.7913690 272 8 0.833333 30 4 0.759271 199 9 0.8902669 217 9 0.818086 289 9 0.925702 235 9 0.900614 236 8 0.927215 247 7 0.808937 166 5 0.800135 0.7996077 0.820527 0.887471 0.825861 0.903738 0.938251 0.8834064 0.904528 0.892432 0.884324 0.8609897 0.8686887 0.9166105 0.906456 0.8657297 0.869008 0.906282 0.938582 0.9366912 0.813500 0.8110820 0.854539 0.932061 0.9627154 0.925539 0.879545 0.949283 0.829245 0.940412 0.8913370 0.845400 0.6962452 0.7396049 0.71605573 0.92732775 0.8019165 0.8155014 0.878849 0.879023 0.8688381 0.880155 0.922810 4 0.870939 0.896474 -1.9594e-02 8 0.785483 0.884171 -0.0986881 0.9935979 0.00465489 weaklyHypometh 1.00000 0.69542 insignificant 0.950678 0.0594571 insignificant 1 1 insignificant -0.07239821 0.010181 weaklyHypometh 1 insignificant 0.870939 0.7500000 0.1292467 8 0.785483 0.7580569 0.0274263 9.1187e-06 8.0859e-01 weaklyHypermeth 1.3816e-04 1.0000e+00 weaklyHypermeth 4.8732e-01 6.2258e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0116459 7.1352e-01 insignificant 1.0000e+00 insignificant 0.870939 0.890026 -0.0049200 8 0.785483 0.810215 -0.02473220 7.9338e-01 1.1777e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.4812e-01 1.4796e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.07539693 0.04102659 weaklyHypometh 0.891882 insignificant 0.896474 0.7500000 1.4519e-01 8 0.884171 0.7580569 0.1261144 2.5486e-05 9.9918e-01 weaklyHypermeth 3.6937e-04 1.0000e+00 weaklyHypermeth 2.5518e-01 9.8725e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0840441 2.9132e-02 weaklyHypermeth 3.9368e-01 insignificant 0.896474 0.890026 0.0102485 8 0.884171 0.810215 0.0739559 2.6232e-01 7.3897e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.8737e-01 6.5594e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0029987 9.2997e-01 insignificant 1.0000000 insignificant 0.7500000 0.890026 -0.1422604 8 0.7580569 0.810215 -0.0521585 9.9674e-01 2.1114e-03 weaklyHypometh 1.0000e+00 2.7421e-02 weaklyHypometh 9.5521e-01 2.9089e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.08704281 4.3909e-02 weaklyHypometh 5.5582e-01 insignificant chr15 88645350 88646350 47794 ENSG00000221309 0.628197 180 4 0.5233198 189 5 0.538547 136 6 0.630952 178 4 0.453626 72 4 0.472414 220 7 0.329405 86 4 0.5905348 191 5 0.409252 167 5 0.424603 154 6 0.582492 265 7 0.405159 89 4 0.3559415 219 7 0.6502444 83 4 0.567127 227 7 0.5455305 52 2 0.300000 13 1 0.439258 230 4 0.342460 234 7 0.561978 160 5 0.544604 75 6 0.4964196 110 4 0.462049 123 5 0.440387 106 6 0.356680 66 4 0.430939 251 7 0.435185 237 7 0.416667 62 4 0.631346 164 6 0.5426420 253 7 0.4535610 197 7 0.645850 212 5 0.4145600 190 7 0.5283208 115 7 0.7661881 202 5 0.607955 25 2 0.469061 139 6 0.5708625 186 6 0.552137 116 4 0.546128 152 5 0.402957 148 4 0.663480 87 4 0.467686 130 4 0.351470 0.2318925 0.339179 0.236791 0.325819 0.337138 0.278847 0.3589706 0.230769 0.364419 0.337303 0.2806995 0.1851688 0.5248944 0.240920 0.2370456 0.348820 0.328613 0.188348 0.3070324 0.477141 0.2612254 0.245438 0.248648 0.2709884 0.205596 0.164998 0.248474 0.332131 0.207450 0.2175357 0.420193 0.1956244 0.1803097 0.83567753 0.29765269 0.1910137 0.2362014 0.325068 0.360462 0.2673762 0.405165 0.235616 4 0.326868 0.315733 2.4755e-02 5 0.404605 0.474184 -0.0695790 0.6482212 0.33924014 insignificant 1.00000 1.00000 insignificant 0.669565 0.6033128 insignificant 1 1 insignificant -0.00047548 0.989279 lowCoverage 1 lowCoverage 0.326868 0.3967328 -0.0173165 4 0.404605 0.4912308 -0.0866255 9.7244e-01 5.1776e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.1370e-01 3.2821e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0719392 2.3483e-01 lowCoverage 1.0000e+00 lowCoverage 0.327702 0.304897 -0.0117076 4 0.455181 0.516241 -0.06106019 8.9360e-01 3.0691e-02 lowCoverage 1.0000e+00 7.4911e-01 lowCoverage 9.2035e-01 5.7482e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.03892552 0.46438547 lowCoverage 1.000000 lowCoverage 0.315733 0.3967328 -3.9745e-02 4 0.474184 0.4912308 -0.0170465 8.9229e-01 4.4129e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.3241e-01 7.1022e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage -0.0714637 2.4029e-01 insignificant 1.0000e+00 insignificant 0.316901 0.304897 -0.0405585 4 0.520957 0.516241 0.0047162 8.9960e-01 3.3377e-02 lowCoverage 1.0000e+00 8.1406e-01 lowCoverage 9.8779e-01 4.5507e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0384500 4.7313e-01 lowCoverage 1.0000000 lowCoverage 0.3976608 0.304897 -0.0127255 4 0.5526346 0.516241 0.0363935 9.2533e-01 1.5967e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.8614e-01 2.0272e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.03301363 6.3209e-01 lowCoverage 1.0000e+00 lowCoverage chr15 88739350 88740350 47800 IQGAP1 ENSG00000140575 0.706577 89 9 0.4636425 129 8 0.548611 48 7 0.772863 97 5 0.666429 63 6 0.772436 119 8 0.632435 65 6 0.7354663 72 7 0.804861 64 7 0.867788 54 3 0.663642 205 8 0.761905 24 3 0.6765422 77 7 0.8100000 49 4 0.698052 63 5 0.5449735 37 3 0.876272 275 3 0.825679 128 8 0.671168 112 8 0.786968 62 5 0.416667 35 3 0.7777778 12 0 0.580808 57 7 0.753061 43 7 0.847866 72 4 0.710942 122 7 0.700868 64 6 0.645833 35 5 0.810714 81 8 0.7094398 141 8 0.7363091 96 8 0.706956 63 6 0.7445112 118 8 0.7015873 95 7 0.7010727 99 7 0.729167 56 4 0.727370 53 4 0.8116091 109 8 0.709423 91 5 0.757778 67 5 0.596212 87 6 0.717949 51 3 0.796916 100 7 0.830054 0.6828790 0.596567 0.920680 0.616376 0.807327 0.680290 0.6554394 0.779042 0.874609 0.826911 0.7906610 0.5864877 0.6907859 0.717147 0.5158730 0.777878 0.866169 0.838049 0.7981921 0.552334 0.7572454 0.534779 0.772629 0.8622795 0.818584 0.680172 0.560434 0.801161 0.787866 0.7537258 0.841895 0.7003041 0.7406504 0.65708479 0.87094836 0.7310195 0.7963267 0.824911 0.853839 0.8333333 0.823640 0.829441 2 0.764094 0.734470 1.6681e-02 7 0.648473 0.629685 0.0187883 0.3667073 0.80372612 insignificant 1.00000 1.00000 insignificant 0.791656 0.7109045 insignificant 1 1 insignificant 0.01454523 0.725731 insignificant 1 insignificant 0.764192 0.7509434 0.0036448 7 0.683135 0.7452802 -0.0621456 9.3621e-01 5.6565e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8820e-01 5.8295e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0215707 4.7426e-01 insignificant 1.0000e+00 insignificant 0.764254 0.810606 -0.0510170 6 0.646957 0.647529 -0.00057186 3.0266e-01 5.2556e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 6.4789e-01 1.2847e-02 weaklyHypometh 1.0000e+00 5.3531e-01 insignificant -0.00133994 0.97505689 insignificant 1.000000 insignificant 0.734470 0.7514231 -1.3976e-02 7 0.629685 0.7634218 -0.1337368 9.2016e-01 4.3108e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.2809e-01 5.1058e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0361159 3.4152e-01 insignificant 1.0000e+00 insignificant 0.735366 0.810606 -0.0450367 6 0.682159 0.647529 0.0346297 7.7066e-01 1.0709e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.1484e-01 6.8036e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0158852 7.4155e-01 insignificant 1.0000000 insignificant 0.7509506 0.810606 -0.0514726 7 0.7437069 0.647529 0.0961779 8.4504e-01 1.6248e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.9394e-01 2.8668e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02023071 6.0991e-01 insignificant 1.0000e+00 insignificant chr15 88860550 88861550 47809 IQGAP1 ENSG00000140575 0.786947 202 7 0.7254587 172 7 0.742376 100 6 0.829149 158 7 0.736054 68 6 0.765427 257 7 0.717796 80 6 0.7789145 130 7 0.870677 103 7 0.820495 75 6 0.778835 242 7 0.698413 36 3 0.8323890 157 7 0.8100000 18 2 0.868135 100 7 0.6969697 31 3 0.786765 44 3 0.935228 142 7 0.864325 178 7 0.819384 219 7 0.828816 51 4 0.8995726 71 7 0.828085 140 7 0.747279 41 4 0.848413 55 7 0.799164 209 7 0.742200 56 4 0.812500 20 1 0.867486 128 7 0.8055852 234 7 0.7312794 213 7 0.798280 300 7 0.7068122 161 7 0.7425868 123 7 0.7153425 137 6 0.844898 32 3 0.702785 74 7 0.7497473 223 7 0.872328 183 7 0.887770 204 7 0.870519 183 7 0.839971 162 7 0.876144 178 7 0.830122 0.7631079 0.765206 0.848551 0.818586 0.837563 0.779516 0.8408695 0.867773 0.866980 0.808009 0.7784722 0.8211891 0.7941584 0.888448 0.7811072 0.648657 0.934377 0.873797 0.8516431 0.830251 0.8510150 0.866382 0.815060 0.8472222 0.838219 0.825682 0.798907 0.861459 0.844201 0.7765280 0.846438 0.7476599 0.7058742 0.68481942 0.80839286 0.7951134 0.7930656 0.882749 0.883399 0.8603988 0.826616 0.885478 3 0.826035 0.836627 -8.4501e-03 7 0.806204 0.808533 -0.0023289 0.5559572 0.57449407 insignificant 1.00000 1.00000 insignificant 0.485082 0.4046363 insignificant 1 1 insignificant -0.01586807 0.444569 insignificant 1 insignificant 0.826035 0.7466667 0.0826813 7 0.806204 0.7369634 0.0692410 2.0925e-04 9.9686e-01 weaklyHypermeth 2.6827e-03 1.0000e+00 weaklyHypermeth 1.6034e-02 9.8734e-01 weaklyHypermeth 1.8864e-01 1.0000e+00 insignificant 0.0494916 8.6302e-02 insignificant 9.5891e-01 insignificant 0.826035 0.875824 -0.0503235 7 0.806204 0.870990 -0.06478572 9.7682e-01 1.7654e-02 weaklyHypometh 1.0000e+00 6.3109e-01 insignificant 9.6060e-01 2.8350e-02 weaklyHypometh 1.0000e+00 9.1453e-01 insignificant -0.07615938 0.00011205 weaklyHypometh 0.024464 weaklyHypometh 0.836627 0.7466667 8.9866e-02 7 0.808533 0.7369634 0.0715698 1.3183e-04 9.9491e-01 weaklyHypermeth 1.7814e-03 1.0000e+00 weaklyHypermeth 1.3527e-02 9.9104e-01 weaklyHypermeth 1.5199e-01 1.00000000 insignificant 0.0653597 3.2379e-02 weaklyHypermeth 4.2605e-01 insignificant 0.836627 0.875824 -0.0379541 7 0.808533 0.870990 -0.0624568 9.9455e-01 2.2359e-02 weaklyHypometh 1.0000e+00 6.9873e-01 insignificant 9.9006e-01 9.3185e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0602913 2.5963e-03 weaklyHypometh 0.3560056 insignificant 0.7466667 0.875824 -0.1281369 7 0.7369634 0.870990 -0.1340267 1.0000e+00 4.9764e-05 weaklyHypometh 1.0000e+00 1.0367e-03 weaklyHypometh 9.9996e-01 4.1678e-03 weaklyHypometh 1.0000e+00 7.7182e-02 weaklyHypometh -0.12565101 1.3777e-03 weaklyHypometh 4.9148e-02 weaklyHypometh chr15 88903650 88904650 47813 CRTC3 ENSG00000140577 0.902449 63 5 0.7619079 146 6 0.792440 217 5 0.783550 161 5 0.824444 37 5 0.852183 130 6 0.900000 54 4 0.7818182 33 4 0.866667 44 4 0.669048 40 4 0.805515 91 5 0.733333 27 2 0.7857143 29 3 1.0000000 11 1 0.712500 44 3 0.6846154 30 2 0.500000 13 1 0.833514 47 3 0.947205 68 3 0.668943 132 5 0.885714 31 4 0.6111111 21 2 0.873611 87 5 0.881944 23 2 1.000000 12 1 0.710418 150 7 0.657471 44 2 0.819444 30 2 0.637500 48 3 0.9680272 166 6 0.8180272 123 6 0.814089 151 6 0.9051465 194 6 0.7514286 52 3 0.8761905 117 5 1.000000 3 0 0.666756 66 4 0.8124673 197 5 0.817944 75 3 0.829472 102 4 0.896825 38 2 0.833333 22 2 0.819074 66 6 0.967755 0.8473820 0.815340 0.905126 0.894558 0.939136 0.989796 0.8456401 0.891156 0.962828 0.905256 0.8775510 0.9577259 0.9513186 0.948980 0.4152276 0.912909 0.891415 0.860439 0.9131800 0.885714 0.8738250 0.919048 0.831733 0.9860699 0.968944 0.729768 0.811224 0.837755 0.929155 0.8695335 0.936018 0.8314805 0.6154519 0.92517007 0.88329818 0.8693114 0.9187318 0.966152 0.947693 0.9693878 0.986395 0.959913 1 0.894848 0.890395 2.7488e-03 5 0.801361 0.828360 -0.0269992 0.6139889 0.76394947 insignificant 1.00000 1.00000 insignificant 0.362943 0.5147745 insignificant 1 1 insignificant -0.01615411 0.720697 lowCoverage 1 lowCoverage 0.894848 0.8934817 0.0233900 5 0.801361 0.7312838 0.0700769 2.4622e-01 7.4573e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.8733e-01 5.7210e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0450391 4.3162e-01 lowCoverage 1.0000e+00 lowCoverage 0.895966 0.933993 -0.0441154 3 0.844412 0.864581 -0.02016898 6.4104e-01 3.4188e-02 lowCoverage 1.0000e+00 7.9507e-01 lowCoverage 6.0457e-01 7.2200e-03 lowCoverage 1.0000e+00 3.9120e-01 lowCoverage -0.04903748 0.10673269 lowCoverage 1.000000 lowCoverage 0.890395 0.8934817 2.2916e-02 5 0.828360 0.7312838 0.0970762 1.4224e-01 7.6186e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.8474e-01 6.6419e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0288850 6.4314e-01 lowCoverage 1.0000e+00 lowCoverage 0.892694 0.933993 -0.0538996 3 0.851459 0.864581 -0.0131223 8.6231e-01 3.9932e-02 lowCoverage 1.0000e+00 9.2865e-01 lowCoverage 8.7688e-01 1.3521e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0328834 4.2040e-01 lowCoverage 1.0000000 lowCoverage 0.8963317 0.933993 -0.0811597 3 0.8357529 0.864581 -0.0288283 9.1253e-01 8.0402e-04 lowCoverage 1.0000e+00 1.2000e-02 lowCoverage 8.0773e-01 1.2131e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.00399838 9.3935e-01 lowCoverage 1.0000e+00 lowCoverage chr15 94397350 94398350 47931 ENSG00000208900 0.028809 210 8 0.0344547 272 11 0.013942 453 11 0.017188 192 6 0.064484 120 6 0.128659 314 8 0.065185 124 6 0.0037037 230 6 0.026944 325 6 0.025022 285 6 0.056001 202 6 0.018939 223 6 0.0053763 201 6 0.0046296 160 6 0.044872 326 6 0.0412698 148 6 0.009804 64 6 0.237857 216 6 0.089744 112 4 0.043210 271 6 0.216667 64 5 0.0177404 211 6 0.124411 230 11 0.137235 85 6 0.016667 115 6 0.012324 405 11 0.025104 186 6 0.050000 142 6 0.055556 112 6 0.0085573 354 11 0.0111877 271 11 0.015844 261 9 0.2793561 182 11 0.3742063 74 6 0.2005361 99 6 0.150000 39 4 0.298141 135 6 0.0988292 201 11 0.108671 327 6 0.150177 181 6 0.000000 148 6 0.000000 143 4 0.023962 175 6 0.031576 0.0286738 0.009063 0.024613 0.048225 0.024183 0.044748 0.0042636 0.012568 0.014393 0.039003 0.0120904 0.0025319 0.0060562 0.021020 0.0240864 0.004617 0.057776 0.046176 0.0014535 0.156686 0.0081835 0.035518 0.071965 0.0078488 0.011906 0.011696 0.023547 0.026163 0.013131 0.0130714 0.021252 0.2040274 0.2915801 0.34752011 0.11627907 0.2095883 0.1240310 0.015103 0.045136 0.0000000 0.000000 0.029032 6 0.024966 0.029752 -4.1187e-03 6 0.064778 0.106842 -0.0420648 0.6808971 0.50477255 insignificant 1.00000 1.00000 insignificant 0.420680 0.7441691 insignificant 1 1 insignificant -0.00960288 0.677911 insignificant 1 insignificant 0.024752 0.2676056 -0.2506251 6 0.025212 0.2005265 -0.1753147 1.0000e+00 6.5240e-30 hypomethylated 1.0000e+00 6.5240e-27 hypomethylated 1.0000e+00 6.6155e-09 hypomethylated 1.0000e+00 1.8544e-06 hypomethylated -0.1855067 5.5375e-03 weaklyHypometh 1.0858e-01 insignificant 0.024752 0.018711 -0.0031538 6 0.025212 0.095263 -0.07005133 6.7728e-01 7.6896e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 5.8276e-01 9.1140e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00855736 0.80571858 insignificant 1.000000 insignificant 0.029158 0.2602740 -2.2841e-01 9 0.018807 0.1470528 -0.1282456 1.0000e+00 8.7739e-14 hypomethylated 1.0000e+00 4.3869e-11 hypomethylated 1.0000e+00 4.2105e-06 hypomethylated 1.0000e+00 0.00140350 hypomethylated -0.1759039 6.1427e-03 weaklyHypometh 1.1813e-01 insignificant 0.029158 0.018480 -0.0025907 6 0.018807 0.069860 -0.0510525 9.9669e-01 6.7682e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8103e-01 9.7501e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0010455 9.7779e-01 insignificant 1.0000000 insignificant 0.2602740 0.018480 0.2051569 6 0.1470528 0.069860 0.0771931 1.7923e-06 9.9994e-01 hypermethylated 6.8991e-04 1.0000e+00 hypermethylated 1.1879e-03 1.0000e+00 weaklyHypermeth 3.9596e-01 1.0000e+00 insignificant 0.17694938 8.1191e-03 weaklyHypermeth 1.6915e-01 insignificant chr15 97234450 97235450 47976 IGF1R ENSG00000140443 0.578042 356 5 0.3719035 178 5 0.377527 163 5 0.558732 453 5 0.373156 97 5 0.652076 390 5 0.510786 139 5 0.5951620 173 5 0.450456 215 5 0.576118 152 5 0.641767 259 5 0.633268 94 5 0.1648768 322 5 0.5479128 88 5 0.473342 214 5 0.6382979 95 3 0.503338 396 5 0.274716 518 5 0.435184 112 5 0.517192 287 5 0.527778 25 1 0.1054420 269 5 0.715643 103 5 0.462165 89 5 0.489331 122 5 0.316503 238 5 0.569988 125 5 0.332680 89 5 0.510010 107 5 0.3616457 267 5 0.3925424 178 5 0.638764 292 5 0.0192045 274 5 0.0000000 139 5 0.0000000 227 3 0.000000 72 5 0.032908 130 5 0.0033333 299 5 0.103996 499 5 0.130202 369 5 0.162427 413 5 0.375654 380 5 0.315834 398 5 0.574590 0.3702149 0.368983 0.547116 0.504135 0.771292 0.642097 0.5568485 0.437618 0.493211 0.631360 0.6343814 0.1441181 0.5601031 0.450252 0.4782348 0.657325 0.333036 0.431285 0.5022897 0.656540 0.0959937 0.680396 0.502297 0.4635529 0.392985 0.543916 0.375556 0.540718 0.366700 0.3819594 0.620807 0.0176356 0.0000000 0.00305341 0.00000000 0.0205406 0.0021519 0.090533 0.106551 0.1504431 0.312053 0.153933 5 0.519370 0.423845 9.4964e-02 5 0.411398 0.370677 0.0407208 0.0455496 0.99769076 weaklyHypermeth 1.00000 1.00000 insignificant 0.325455 0.9812437 insignificant 1 1 insignificant 0.04181842 0.459866 lowCoverage 1 lowCoverage 0.519940 0.0078878 0.5133987 5 0.509291 0.0106319 0.4986589 3.6664e-24 1.0000e+00 hypermethylated 2.2915e-22 1.0000e+00 hypermethylated 5.7694e-14 1.0000e+00 hypermethylated 6.4104e-12 1.0000e+00 hypermethylated 0.4844517 3.9241e-13 lowCoverage 6.5401e-11 lowCoverage 0.519702 0.172899 0.3558010 5 0.479965 0.320965 0.15899991 1.5313e-10 9.7364e-01 hypermethylated 2.1876e-08 1.0000e+00 hypermethylated 3.8474e-09 9.9013e-01 hypermethylated 9.6184e-07 1.0000e+00 hypermethylated 0.27606999 0.00327859 lowCoverage 0.225904 lowCoverage 0.424211 0.0078878 4.1755e-01 5 0.418948 0.0106319 0.4083164 4.8519e-16 1.0000e+00 hypermethylated 2.4260e-14 1.0000e+00 hypermethylated 6.0005e-12 1.0000e+00 hypermethylated 6.6672e-10 1.00000000 hypermethylated 0.4426332 1.1985e-06 lowCoverage 6.6583e-05 lowCoverage 0.424290 0.172899 0.2592693 5 0.432457 0.320965 0.1114923 5.6666e-06 9.9797e-01 hypermethylated 5.6666e-04 1.0000e+00 hypermethylated 2.8027e-06 9.9986e-01 hypermethylated 4.6939e-04 1.0000e+00 hypermethylated 0.2342516 8.1583e-03 lowCoverage 0.4798997 lowCoverage 0.0078878 0.172498 -0.1592977 5 0.0106319 0.185158 -0.1745257 1.0000e+00 9.1646e-10 weaklyHypometh 1.0000e+00 4.3641e-08 weaklyHypometh 1.0000e+00 2.5185e-07 weaklyHypometh 1.0000e+00 3.1482e-05 weaklyHypometh -0.20838167 1.7711e-02 lowCoverage 2.9915e-01 lowCoverage chr15 97263950 97264950 47980 IGF1R ENSG00000140443 0.810571 136 5 0.8102564 88 5 0.640802 105 5 0.846733 64 4 0.797917 78 5 0.828829 182 5 0.793290 110 5 0.8878363 67 5 0.826818 68 5 0.873780 77 5 0.829667 146 5 0.673156 81 3 0.8591503 90 5 NA 0 0 0.777375 100 5 0.8264352 66 3 0.838095 81 4 0.624359 87 4 0.767949 52 4 0.857019 147 5 0.791429 25 2 0.7717172 38 4 0.805895 78 5 0.873662 67 5 0.853535 31 3 0.889800 91 4 0.779121 44 4 0.922222 52 5 0.930719 50 4 0.8475186 121 5 0.8254098 92 5 0.888436 173 5 0.5530706 133 5 0.2171429 47 3 0.5805556 84 4 0.541667 19 2 0.584975 74 5 0.5692210 115 5 0.851548 84 5 0.861389 61 4 0.855193 50 4 0.745249 61 4 0.810707 76 5 0.761069 0.7875230 0.606016 0.783791 0.673871 0.767196 0.702199 0.8361261 0.762603 0.804446 0.763890 0.6191920 0.7835044 NA 0.678538 0.6833377 0.710280 0.686077 0.692667 0.7536300 0.751268 0.7268007 0.733590 0.791188 0.8505412 0.814185 0.685761 0.832814 0.883269 0.818442 0.7339127 0.830529 0.5638959 0.2871829 0.52683150 0.46774531 0.6360863 0.6459575 0.816137 0.838967 0.7188530 0.784473 0.728906 2 0.761644 0.835267 -5.9663e-02 5 0.799626 0.853795 -0.0541685 0.8828581 0.00077793 weaklyHypometh 1.00000 0.25931 insignificant 0.985967 0.0068951 weaklyHypometh 1 1 insignificant -0.04986569 0.040677 lowCoverage 1 lowCoverage 0.761644 0.4830508 0.2744923 5 0.799626 0.5034256 0.2962009 1.1134e-14 9.9698e-01 hypermethylated 4.2114e-13 1.0000e+00 hypermethylated 1.2755e-05 9.9800e-01 hypermethylated 4.2518e-04 1.0000e+00 hypermethylated 0.2906512 3.2698e-03 lowCoverage 7.1082e-02 lowCoverage 0.761644 0.819277 -0.0337604 4 0.799626 0.837072 -0.03744548 7.8191e-01 1.9639e-02 lowCoverage 1.0000e+00 6.3109e-01 lowCoverage 5.5145e-01 1.3406e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.02639405 0.36460927 lowCoverage 1.000000 lowCoverage 0.835267 0.4830508 3.5086e-01 5 0.853795 0.5034256 0.3503694 3.3913e-16 1.0000e+00 hypermethylated 1.7849e-14 1.0000e+00 hypermethylated 1.1486e-06 1.0000e+00 hypermethylated 6.0451e-05 1.00000000 hypermethylated 0.3405169 1.5789e-03 lowCoverage 3.8509e-02 lowCoverage 0.835267 0.819277 0.0214270 4 0.853795 0.837072 0.0167231 1.7469e-01 3.2043e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 2.8744e-01 6.2731e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0234716 4.0643e-01 lowCoverage 1.0000000 lowCoverage 0.4830508 0.819277 -0.3639299 4 0.5034256 0.837072 -0.3336464 1.0000e+00 1.1053e-07 lowCoverage 1.0000e+00 3.9473e-06 lowCoverage 1.0000e+00 1.1282e-04 lowCoverage 1.0000e+00 4.5128e-03 lowCoverage -0.31704523 1.9367e-03 lowCoverage 5.8023e-02 lowCoverage chr15 97314550 97315550 47984 IGF1R ENSG00000140443 0.948095 305 6 0.9240927 322 6 0.892992 153 6 0.944444 286 6 0.974123 118 6 0.926511 344 6 0.931818 213 6 0.9400088 280 6 0.889613 140 6 0.913063 228 6 0.904678 430 6 0.967974 95 6 0.9584124 197 6 0.9048090 136 6 0.967684 314 6 0.9761905 74 6 0.500000 2 0 0.937032 319 6 0.926681 540 6 0.922345 316 6 0.914540 127 6 0.9216566 108 6 0.911397 246 6 0.677171 99 6 0.982456 98 6 0.963162 454 6 0.899321 249 6 0.861355 207 7 0.951432 446 6 0.9492325 453 6 0.9356269 416 6 0.902460 251 6 0.8247415 263 6 0.8614122 220 6 0.9269970 372 6 0.416667 12 0 0.640922 166 6 0.9264609 510 6 0.928800 424 6 0.945164 280 6 0.955909 282 6 0.925672 258 6 0.960408 250 6 0.947063 0.9107890 0.893374 0.943392 0.975887 0.926392 0.930189 0.9381842 0.890711 0.898059 0.905015 0.9659012 0.9573035 0.9049939 0.966442 0.9752460 0.784059 0.936938 0.926487 0.9099374 0.916564 0.9206440 0.911093 0.677506 0.9828590 0.962589 0.898735 0.915890 0.950754 0.939819 0.9364093 0.900577 0.8239941 0.8593322 0.92276566 0.42066806 0.8513961 0.9280871 0.929876 0.945961 0.9554739 0.925591 0.960261 6 0.929759 0.924540 3.9766e-03 6 0.947082 0.881776 0.0653058 0.3861564 0.93983159 insignificant 1.00000 1.00000 insignificant 0.620870 0.9448277 insignificant 1 1 insignificant 0.00671106 0.835532 insignificant 1 insignificant 0.929759 0.8781594 0.0428241 6 0.947082 0.6653225 0.2817595 1.4859e-02 8.6095e-01 weaklyHypermeth 1.3386e-01 1.0000e+00 insignificant 1.0066e-02 6.9913e-01 weaklyHypermeth 1.2742e-01 1.0000e+00 insignificant 0.1463283 1.3814e-01 insignificant 1.0000e+00 insignificant 0.929715 0.943775 -0.0101160 6 0.929443 0.939211 -0.00976821 8.0737e-01 1.0815e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.8021e-01 1.5516e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03066236 0.20615373 insignificant 1.000000 insignificant 0.924540 0.8781594 4.4884e-02 6 0.881776 0.6653225 0.2164537 1.2120e-01 8.6715e-01 insignificant 9.3956e-01 1.0000e+00 insignificant 8.0053e-02 8.8595e-01 insignificant 7.5522e-01 1.00000000 insignificant 0.1396173 1.5400e-01 insignificant 1.0000e+00 insignificant 0.925254 0.943775 -0.0148196 6 0.925702 0.939211 -0.0135092 9.4013e-01 3.0983e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4607e-01 2.2500e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0373734 1.4150e-01 insignificant 1.0000000 insignificant 0.8792992 0.943775 -0.0447313 6 0.8870966 0.939211 -0.0521142 8.9446e-01 9.6966e-02 insignificant 1.0000e+00 7.3459e-01 insignificant 8.9721e-01 5.3416e-02 insignificant 1.0000e+00 5.5641e-01 insignificant -0.17699068 8.3494e-02 insignificant 8.4858e-01 insignificant chr15 97480950 97481950 47991 SYNM ENSG00000182253 0.730853 736 19 0.4555539 682 18 0.382250 721 17 0.795810 654 17 0.646320 405 14 0.681691 777 19 0.712026 509 20 0.5657767 626 20 0.564916 606 17 0.709232 548 17 0.770560 677 20 0.679341 358 17 0.3908907 643 17 0.7918390 294 8 0.510153 755 17 0.5978044 395 12 0.478193 152 12 0.376766 1008 17 0.401782 675 15 0.686500 612 20 0.712864 196 14 0.3607519 369 12 0.806363 452 20 0.753441 424 19 0.641699 234 13 0.543017 812 20 0.560952 499 19 0.462649 279 15 0.611502 612 18 0.4934557 1037 20 0.5917263 821 20 0.829902 724 20 0.1410889 742 20 0.1795625 508 20 0.2022667 382 14 0.274105 118 9 0.142292 536 19 0.1354230 828 20 0.480711 879 20 0.428517 685 20 0.488660 642 18 0.521064 761 18 0.491678 693 18 0.776284 0.4330384 0.466298 0.787334 0.618521 0.782155 0.773091 0.5661739 0.616499 0.723035 0.813303 0.6752127 0.3522614 0.7275306 0.635172 0.6645375 0.522714 0.457193 0.505041 0.6679120 0.806005 0.4158432 0.836419 0.803937 0.6288409 0.560611 0.615972 0.552499 0.655908 0.470653 0.5493840 0.834403 0.0987154 0.1309016 0.12714866 0.17078941 0.0857997 0.1023880 0.545884 0.496148 0.6306631 0.630960 0.449696 10 0.615820 0.628425 -1.1125e-02 20 0.546520 0.610846 -0.0643260 0.9895467 0.07652495 insignificant 1.00000 1.00000 insignificant 0.994789 0.4639281 insignificant 1 1 insignificant -0.01761420 0.739106 insignificant 1 insignificant 0.615976 0.1480887 0.4781708 20 0.571362 0.1449599 0.4264019 1.2549e-71 1.0000e+00 hypermethylated 4.1829e-69 1.0000e+00 hypermethylated 1.3339e-32 1.0000e+00 hypermethylated 1.3339e-29 1.0000e+00 hypermethylated 0.4172898 2.6192e-10 hypermethylated 1.8709e-08 hypermethylated 0.616133 0.410656 0.1280862 19 0.598570 0.478831 0.11973868 7.7818e-10 8.4379e-01 weaklyHypermeth 9.7272e-08 1.0000e+00 weaklyHypermeth 2.4882e-06 9.8782e-01 weaklyHypermeth 4.1469e-04 1.0000e+00 weaklyHypermeth 0.11428685 0.00385222 weaklyHypermeth 0.225904 insignificant 0.628368 0.1480887 4.8961e-01 20 0.593157 0.1449599 0.4481973 3.4115e-65 1.0000e+00 hypermethylated 1.1372e-62 1.0000e+00 hypermethylated 9.5370e-29 1.0000e+00 hypermethylated 9.5370e-26 1.00000000 hypermethylated 0.4349040 9.8960e-08 hypermethylated 7.7304e-06 hypermethylated 0.628563 0.410656 0.1362761 19 0.621403 0.478831 0.1425719 1.2212e-11 9.9853e-01 weaklyHypermeth 1.7446e-09 1.0000e+00 weaklyHypermeth 1.0334e-05 9.9949e-01 weaklyHypermeth 1.4763e-03 1.0000e+00 weaklyHypermeth 0.1319011 9.6976e-03 weaklyHypermeth 0.5129996 insignificant 0.1481839 0.410656 -0.3463039 19 0.1518628 0.478831 -0.3269681 1.0000e+00 1.8363e-40 hypomethylated 1.0000e+00 4.8889e-38 hypomethylated 1.0000e+00 8.1180e-21 hypomethylated 1.0000e+00 8.1180e-18 hypomethylated -0.30300291 1.9015e-06 hypomethylated 2.5569e-04 hypomethylated chr15 97482650 97483650 47992 SYNM ENSG00000182253 0.918386 410 10 0.8262993 143 4 0.836553 155 4 0.949829 413 10 0.937338 79 4 0.974256 365 8 0.872698 146 4 0.9325058 119 4 0.933087 225 4 0.952367 168 4 0.943915 149 4 0.924501 93 4 0.9436053 173 4 0.9615385 143 4 0.941734 177 4 0.9843750 99 4 0.935606 47 4 0.893102 384 5 0.856551 127 5 0.890612 220 4 0.922222 25 4 0.8695850 92 4 0.915664 146 4 0.990385 108 4 0.863756 69 4 0.966263 258 10 0.829436 52 4 0.913840 114 4 0.960227 137 4 0.8864563 199 5 0.8850780 237 9 0.974340 286 5 0.5049186 164 4 0.3425000 83 4 0.5000000 68 2 0.919625 155 10 0.555485 145 4 0.8903804 260 10 0.982539 351 5 0.916891 265 10 0.952397 408 5 0.930645 267 5 0.853248 303 10 0.922263 0.8253042 0.837759 0.928829 0.933879 0.928845 0.872552 0.9340797 0.932808 0.952455 0.946560 0.9213063 0.9449692 0.9616287 0.943023 0.9852553 0.935846 0.863336 0.876882 0.8906839 0.925743 0.8723443 0.888040 0.990385 0.8679055 0.958363 0.830056 0.913119 0.958813 0.934425 0.9312631 0.945384 0.4770891 0.3272350 0.68365009 0.80672926 0.5405954 0.9704714 0.965371 0.891477 0.9465409 0.940604 0.712758 4 0.916797 0.932095 -1.5671e-02 4 0.938937 0.874233 0.0647043 0.9990089 0.07648516 lowCoverage 1.00000 1.00000 lowCoverage 0.989582 0.1484832 lowCoverage 1 1 lowCoverage 0.00567203 0.749130 lowCoverage 1 lowCoverage 0.916797 0.7120000 0.2196376 5 0.938937 0.7656577 0.1732794 1.9537e-07 8.9741e-01 hypermethylated 3.6180e-06 1.0000e+00 hypermethylated 2.3602e-01 9.4496e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.3016249 2.4575e-02 lowCoverage 3.6132e-01 lowCoverage 0.916797 0.909661 0.0114009 5 0.938937 0.938694 0.00024283 6.5144e-01 9.0537e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.1138e-01 8.1147e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00670073 0.78711661 lowCoverage 1.000000 lowCoverage 0.933178 0.7141217 2.2384e-01 4 0.961656 0.8172234 0.1444326 2.7280e-05 9.9485e-01 lowCoverage 3.8971e-04 1.0000e+00 lowCoverage 1.0565e-01 9.9961e-01 lowCoverage 9.5184e-01 1.00000000 lowCoverage 0.2959528 2.6041e-02 weaklyHypermeth 3.5673e-01 insignificant 0.933178 0.909605 0.0257965 4 0.961656 0.932564 0.0290924 1.0466e-01 9.9926e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 1.2935e-01 9.9647e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0123728 6.4658e-01 insignificant 1.0000000 insignificant 0.7120000 0.909661 -0.1998144 5 0.7656577 0.938694 -0.1730365 9.6987e-01 5.7384e-02 insignificant 1.0000e+00 4.6733e-01 insignificant 9.9223e-01 5.7226e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.30832560 2.1979e-02 weaklyHypometh 3.3144e-01 insignificant chr15 97792150 97793150 48000 ENSG00000205141 0.927131 248 7 0.6953634 265 13 0.649375 249 10 0.796697 252 7 0.711722 98 7 0.583468 336 8 0.825161 231 11 0.7906066 261 13 0.723212 159 7 0.740723 276 13 0.788985 299 10 0.695696 155 7 0.8882588 226 12 0.8517298 163 7 0.913582 271 7 0.5796692 124 7 0.591534 46 6 0.690286 308 7 0.661074 242 9 0.823266 389 12 0.635742 94 8 0.6958291 115 6 0.703202 143 7 0.505640 144 9 0.742009 87 7 0.792845 202 9 0.664121 194 10 0.805634 196 10 0.833591 278 13 0.8381338 227 9 0.8131618 192 9 0.763240 277 8 0.8114289 156 9 0.7664051 180 10 0.7549359 283 10 0.801232 160 8 0.510136 229 11 0.6626300 291 9 0.651748 311 7 0.698092 406 10 0.833835 273 10 0.839105 248 7 0.596223 281 10 0.893455 0.6879982 0.804227 0.867777 0.856039 0.838956 0.774266 0.8007952 0.851789 0.795132 0.851464 0.7205560 0.8269246 0.9263111 0.876225 0.8067210 0.613630 0.811688 0.858445 0.8400580 0.751430 0.7868772 0.908874 0.789404 0.8088427 0.895057 0.738641 0.777218 0.828486 0.881584 0.8397031 0.857070 0.8378188 0.9330262 0.78452955 0.69078125 0.7467267 0.7361306 0.771643 0.785615 0.8435950 0.871016 0.800218 6 0.821016 0.810924 3.7603e-05 9 0.771376 0.767818 0.0035574 0.4058681 0.94275731 insignificant 1.00000 1.00000 insignificant 0.400321 0.8470583 insignificant 1 1 insignificant 0.01361449 0.715804 insignificant 1 insignificant 0.821553 0.7232074 0.0736092 9 0.848677 0.6576498 0.1910274 1.9219e-04 8.3357e-01 weaklyHypermeth 2.5289e-03 1.0000e+00 weaklyHypermeth 2.6457e-01 5.0616e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0285823 6.0128e-01 insignificant 1.0000e+00 insignificant 0.821280 0.770092 0.0473683 10 0.828501 0.750549 0.07795166 1.6180e-03 6.9236e-01 weaklyHypermeth 8.9887e-02 1.0000e+00 weaklyHypermeth 3.0590e-01 3.8388e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02257634 0.69163987 insignificant 1.000000 insignificant 0.811533 0.7226956 7.6848e-02 9 0.768202 0.6786698 0.0895322 1.8838e-02 6.5563e-01 weaklyHypermeth 1.7283e-01 1.0000e+00 insignificant 4.6018e-01 2.8980e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0149678 7.9055e-01 insignificant 1.0000e+00 insignificant 0.811533 0.770092 0.0555923 7 0.768202 0.750549 0.0176529 7.7493e-03 2.7518e-01 weaklyHypermeth 2.8701e-01 1.0000e+00 insignificant 1.7735e-01 5.0229e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0089619 8.7824e-01 insignificant 1.0000000 insignificant 0.7221362 0.770244 0.0098390 7 0.6362530 0.766140 -0.1298869 8.5003e-01 3.0233e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6198e-01 7.9081e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00600593 9.3116e-01 insignificant 1.0000e+00 insignificant chr15 97811950 97812950 48004 ENSG00000205141 0.9168851 304 6 0.823494 352 8 0.6894896 215 6 0.8602648 306 5 0.822391 84 5 0.890963 264 4 0.7891968 143 5 0.896723 163 5 0.6720328 105 4 0.9600000 48 3 0.888823 224 5 0.764706 51 3 0.5829670 125 4 0.7028986 73 3 0.722849 85 4 0.5600000 34 3 NA 0 0 0.5657842 347 4 0.812894 283 4 0.895462 187 4 0.984375 53 3 0.5528846 39 3 0.780974 89 7 0.782967 43 3 0.7725103 333 5 0.8322100 446 8 0.787719 53 3 0.889286 25 3 0.8545274 229 4 0.899832 415 8 0.9140399 464 8 0.930938 201 4 0.4443653 305 8 0.2000000 271 4 0.710714 86 3 0.3636364 102 5 0.267143 160 5 0.4763117 431 8 0.8120917 308 4 0.6307302 236 5 0.6335449 266 4 0.3459062 353 4 0.769113 253 5 0.8505694 0.7513136 0.461649 0.7910293 0.6875574 0.7336371 0.8586967 0.8583366 0.7334806 0.9350168 0.843972 0.7676030 0.5334804 0.744620 0.6661702 0.2893939 NA 0.35839968 0.7554042 0.7253542 0.9791667 0.4101593 0.897412 0.713176 0.7306005 0.7423720 0.723693 0.819084 0.7624453 0.8300265 0.8147402 0.832845 0.01309390 0.0000000 NA 0.02066116 0.0185786 0.0171848 0.6167791 0.3530112 0.596615 0.2961783 0.5426715 3 0.7344533 0.8079498 -0.06491027 5 0.783985 0.772380 0.01160461 0.986607 4.7924e-02 weaklyHypometh 1 1.0000e+00 insignificant 0.8671252 2.4353e-01 insignificant 1 1.0000e+00 insignificant -5.1970e-02 0.2369886 lowCoverage 1 lowCoverage 0.7344533 0.2451994 0.62264842 5 0.783985 0.429327 0.35465737 1.3657e-22 7.3945e-01 hypermethylated 5.0580e-21 1.0000e+00 hypermethylated 1.0337e-08 9.9825e-01 hypermethylated 3.9758e-07 1.0000e+00 hypermethylated 0.36952369 2.6813e-03 lowCoverage 4.6229e-02 lowCoverage 0.734730 0.4978814 0.2214913 4 0.819483 0.718489 0.10099336 1.1132e-04 2.3015e-01 lowCoverage 4.1590e-03 1.0000e+00 lowCoverage 8.8085e-04 7.7566e-01 lowCoverage 4.0038e-02 1.0000e+00 lowCoverage 0.1416082 1.6167e-01 lowCoverage 1.0000000 lowCoverage 0.807950 0.2451994 0.6532363 7 0.772380 0.429327 3.4305e-01 1.1880e-31 9.9457e-01 hypermethylated 6.9882e-30 1.0000e+00 hypermethylated 1.3970e-07 9.9894e-01 hypermethylated 4.9893e-06 1.0000e+00 hypermethylated 0.4214936 1.2059e-03 lowCoverage 2.6798e-02 lowCoverage 0.8082880 0.4978814 0.28714465 5 0.868928 0.718489 0.15043817 6.2365e-09 7.5964e-01 hypermethylated 4.2090e-07 1.0000e+00 hypermethylated 1.1817e-04 0.73204280 hypermethylated 7.0157e-03 1.00000 hypermethylated 1.9358e-01 7.5187e-02 lowCoverage 1.000000 lowCoverage 0.2453806 0.497881 -0.41993421 5 0.482993 0.718489 -0.2354962 9.9997e-01 1.7862e-09 hypomethylated 1.0000e+00 6.8702e-08 hypomethylated 1.0000e+00 4.6507e-05 hypomethylated 1.0000e+00 1.8603e-03 hypomethylated -0.2279155 6.9240e-02 lowCoverage 6.0209e-01 lowCoverage chr15 99042550 99043550 48016 ENSG00000212306 0.6630932 184 7 0.636780 173 7 0.5394229 199 7 0.7099977 179 7 0.661224 95 7 0.639535 358 7 0.6406760 176 7 0.715337 148 7 0.5939299 123 7 0.6246156 138 7 0.726846 233 7 0.584360 118 7 0.6620234 156 7 NA 0 0 0.644389 174 7 0.5159008 76 7 0.6126707 81 7 0.6787535 169 7 0.631952 160 7 0.693759 313 7 0.763492 51 6 0.6726405 80 7 0.628148 157 7 0.742903 73 6 0.6759259 46 4 0.6341921 291 7 0.633220 56 6 0.708333 42 4 0.6791182 218 7 0.692266 319 7 0.6386573 314 7 0.655028 421 7 0.5856021 188 7 0.5393458 145 7 0.529807 147 7 0.6766082 83 7 0.587467 71 7 0.5495477 251 7 0.7157697 234 7 0.6631612 218 7 0.7053872 184 7 0.7016589 272 7 0.668699 200 7 0.6724982 0.6453737 0.544793 0.7168477 0.6755760 0.6634631 0.6611754 0.7307348 0.6015203 0.6504951 0.743134 0.6071887 0.6794253 NA 0.6685369 0.5448033 0.6295945 0.69907295 0.6492374 0.7120699 0.7645161 0.6843327 0.646370 0.748191 0.6768096 0.6481620 0.655231 0.714456 0.6946351 0.7143911 0.6439196 0.677667 0.59082684 0.5443127 0.53574772 0.66219372 0.6039711 0.5436233 0.7326075 0.6707403 0.730549 0.7113932 0.6740607 6 0.6550876 0.6697292 -0.01399456 7 0.650776 0.663760 -0.01298331 0.960914 3.2930e-01 insignificant 1 1.0000e+00 insignificant 0.9977532 2.4223e-02 weaklyHypometh 1 8.9713e-01 insignificant -3.6190e-02 0.0540703 insignificant 1 insignificant 0.6550876 0.5898305 0.06609354 7 0.650776 0.570520 0.08025670 8.1134e-08 9.9243e-01 weaklyHypermeth 9.7752e-07 1.0000e+00 weaklyHypermeth 5.0113e-04 9.8411e-01 weaklyHypermeth 6.5081e-03 1.0000e+00 weaklyHypermeth 0.06274059 3.6646e-02 weaklyHypermeth 3.5236e-01 insignificant 0.655088 0.6931408 -0.0433499 7 0.650776 0.692236 -0.04145977 9.9830e-01 2.5542e-02 weaklyHypometh 1.0000e+00 5.1084e-01 insignificant 9.9874e-01 1.6002e-02 weaklyHypometh 1.0000e+00 4.5086e-01 insignificant -0.0501317 7.7083e-03 weaklyHypometh 0.2064687 insignificant 0.669729 0.5898305 0.0805918 7 0.663760 0.570520 9.3240e-02 2.7026e-09 9.9946e-01 weaklyHypermeth 4.7413e-08 1.0000e+00 weaklyHypermeth 1.1004e-05 9.9999e-01 weaklyHypermeth 2.6200e-04 1.0000e+00 weaklyHypermeth 0.0989306 4.0930e-03 weaklyHypermeth 6.4968e-02 weaklyHypermeth 0.6697292 0.6931408 -0.02950490 7 0.663760 0.692236 -0.02847645 9.9032e-01 1.3290e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.9238e-01 0.62899089 insignificant 1.0000e+00 1.00000 insignificant -1.3942e-02 4.1133e-01 insignificant 1.000000 insignificant 0.5898305 0.693141 -0.11046092 7 0.570520 0.692236 -0.1217165 1.0000e+00 3.8159e-08 weaklyHypometh 1.0000e+00 1.1223e-06 weaklyHypometh 1.0000e+00 5.5775e-06 weaklyHypometh 1.0000e+00 2.6560e-04 weaklyHypometh -0.1128723 2.3175e-03 weaklyHypometh 6.5645e-02 weaklyHypometh chr15 99070750 99071750 48018 ENSG00000212306 0.9419947 351 8 0.801558 217 9 0.6707532 154 5 0.9290395 325 8 0.964583 49 5 0.800715 404 9 0.8684394 83 5 0.905391 206 8 0.8462247 162 5 0.7434744 120 3 0.836787 291 10 0.844444 68 5 0.8219842 193 6 0.9518066 127 5 0.863405 156 5 0.9294118 55 3 0.4333333 17 0 0.8842132 446 8 0.932213 127 7 0.813815 215 8 0.863790 61 5 0.9351120 108 7 0.951185 95 3 0.681339 69 4 0.9157164 195 6 0.8797356 257 8 0.771776 114 5 0.885101 86 3 0.9007314 183 8 0.883121 323 8 0.9374962 258 8 0.925736 332 8 0.8370107 240 8 0.9164377 129 6 0.862037 144 4 0.8000000 20 0 0.887179 93 6 0.7717178 254 8 0.9250436 236 6 0.7543726 254 6 0.9030474 301 6 0.8656746 162 5 0.895896 228 8 0.9102698 0.8416742 0.635961 0.9203326 0.9175676 0.8473413 0.8071009 0.8687718 0.8434309 0.8788431 0.912454 0.7604828 0.8392899 0.884238 0.8543261 0.9033384 0.6233457 0.80379118 0.8585906 0.9066432 0.7398470 0.9198375 0.942595 0.702003 0.8176703 0.8603157 0.824628 0.738875 0.8835446 0.8486873 0.9087466 0.904373 0.96624039 0.8863768 0.88551695 0.73797206 0.8755140 0.8947826 0.9044831 0.8326416 0.901843 0.8004362 0.9142624 3 0.8585106 0.8798654 -0.02033128 8 0.856554 0.916670 -0.06011525 0.999674 4.6041e-02 weaklyHypometh 1 1.0000e+00 insignificant 0.9954283 3.1860e-01 insignificant 1 1.0000e+00 insignificant -3.8391e-02 0.2835736 insignificant 1 insignificant 0.8583600 0.8647727 -0.01714035 8 0.827865 0.829432 -0.00156661 3.8319e-01 4.5998e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 8.3969e-01 1.6168e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00655111 8.5308e-01 insignificant 1.0000e+00 insignificant 0.860140 0.8797629 -0.0158086 6 0.864693 0.862598 0.00209469 5.0773e-01 3.7956e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.6514e-01 1.9698e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0296274 4.7909e-01 insignificant 1.0000000 insignificant 0.879750 0.8647727 0.0053084 8 0.900004 0.829432 7.0572e-02 2.5456e-01 3.0677e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.4842e-01 2.1490e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0318395 3.2937e-01 insignificant 1.0000e+00 insignificant 0.8794773 0.8797629 -0.00040667 6 0.895838 0.862598 0.03323979 1.0398e-01 4.6713e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.6586e-02 0.27359377 insignificant 1.0000e+00 1.00000 insignificant 8.7631e-03 8.2108e-01 insignificant 1.000000 insignificant 0.8652968 0.879763 0.03144584 6 0.849290 0.862598 -0.0133082 3.1490e-01 8.2994e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.4052e-01 9.1575e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0230763 5.5474e-01 insignificant 1.0000e+00 insignificant chr15 99365550 99366550 48025 LRRK1 ENSG00000154237 0.3727045 245 11 0.372907 239 9 0.2853454 278 9 0.3435407 284 10 0.424665 243 11 0.285428 417 13 0.3737643 243 15 0.300324 268 13 0.3107211 344 13 0.4258970 332 13 0.325826 390 13 0.472804 249 13 0.4371747 303 8 0.2798203 192 5 0.190893 421 10 0.3140344 306 13 0.3946244 470 13 0.3646561 256 9 0.346238 263 13 0.332938 330 12 0.339732 111 9 0.2933730 157 6 0.388637 171 13 0.376014 170 9 0.4493948 116 5 0.3076449 385 13 0.367674 134 6 0.473351 166 10 0.4422462 265 13 0.294680 437 13 0.2352805 344 13 0.382856 292 13 0.1722217 185 8 0.2376687 185 13 0.234033 285 12 0.2745098 47 3 0.320319 238 13 0.3004167 248 13 0.4410749 323 10 0.4455806 221 11 0.4199000 255 10 0.3868832 221 9 0.370227 264 10 0.2673291 0.2561128 0.267103 0.2099141 0.2989697 0.2322314 0.2674356 0.1928451 0.2278627 0.2886142 0.250195 0.2721716 0.2176086 0.169071 0.1334396 0.2682747 0.3346626 0.22716312 0.2652611 0.2438113 0.2128318 0.1556616 0.352188 0.346535 0.2169784 0.2053121 0.222146 0.244178 0.2844305 0.1631110 0.1781911 0.351337 0.13976148 0.1410246 0.31454091 0.08156028 0.2105805 0.1006300 0.2468420 0.2833710 0.274109 0.2353642 0.2534057 5 0.2860201 0.2496350 0.01897049 13 0.341218 0.351111 -0.00989301 0.334880 8.7357e-01 insignificant 1 1.0000e+00 insignificant 0.7220271 2.4893e-01 insignificant 1 1.0000e+00 insignificant -1.4858e-02 0.5648355 insignificant 1 insignificant 0.2861143 0.1887755 0.09852780 13 0.361289 0.341901 0.01938864 6.5431e-08 8.7518e-02 weaklyHypermeth 8.0779e-07 1.0000e+00 weaklyHypermeth 3.8250e-06 4.3564e-01 weaklyHypermeth 9.2338e-05 1.0000e+00 weaklyHypermeth 0.09118729 6.0501e-03 weaklyHypermeth 8.8972e-02 weaklyHypermeth 0.286209 0.2940718 -0.0099658 10 0.383870 0.385198 -0.00132839 7.4239e-01 9.7501e-04 weaklyHypometh 1.0000e+00 7.5001e-02 weaklyHypometh 9.7023e-01 4.0513e-04 weaklyHypometh 1.0000e+00 5.7875e-02 weaklyHypometh -0.0650178 8.2587e-03 weaklyHypometh 0.2064687 insignificant 0.248999 0.1910774 0.0771371 13 0.332631 0.349771 -1.7140e-02 5.3890e-03 7.9525e-01 weaklyHypermeth 3.6412e-02 1.0000e+00 weaklyHypermeth 3.5627e-03 9.4568e-01 weaklyHypermeth 3.5987e-02 1.0000e+00 weaklyHypermeth 0.1060456 3.6534e-03 weaklyHypermeth 6.1922e-02 weaklyHypermeth 0.2487254 0.2936137 -0.02744287 10 0.295555 0.342399 -0.04684333 9.9241e-01 6.9350e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8457e-01 0.06871305 insignificant 1.0000e+00 1.00000 insignificant -5.0160e-02 6.8273e-02 insignificant 0.975323 insignificant 0.1903960 0.293614 -0.09056557 10 0.313647 0.342399 -0.0287515 9.8344e-01 3.7290e-05 weaklyHypometh 1.0000e+00 6.3203e-04 weaklyHypometh 9.9704e-01 1.0787e-03 weaklyHypometh 1.0000e+00 2.0352e-02 weaklyHypometh -0.1562051 2.8817e-04 weaklyHypometh 1.4805e-02 weaklyHypometh chr15 99525350 99526350 48030 LRRK1 ENSG00000154237 0.7804522 325 7 0.723117 161 4 0.7991178 276 9 0.8827183 296 7 0.906389 123 7 0.922652 216 7 0.8116790 177 5 0.751765 222 9 0.8762685 298 9 0.9227878 299 7 0.926530 278 10 0.834392 175 4 0.9330673 230 7 0.7964825 180 7 0.803487 251 4 0.7171382 175 4 0.5333333 12 0 0.5344241 394 7 0.885112 193 4 0.856878 172 7 0.812302 49 6 0.8290985 92 5 0.862654 193 7 0.955784 99 7 0.7725941 72 5 0.9068585 232 8 0.726273 199 8 0.884074 112 4 0.8239034 213 7 0.858827 198 7 0.9415029 157 9 0.907820 198 7 0.6944928 128 7 0.0460213 116 4 1.000000 113 4 0.6224490 33 4 0.712614 147 7 0.6443496 219 7 0.8944968 304 7 0.8217361 290 7 0.8536958 318 7 0.7169180 252 7 0.960062 279 7 0.8474233 0.6438466 0.725431 0.8839523 0.8196236 0.9090694 0.8965648 0.8006399 0.7997700 0.8752822 0.899786 0.8629853 0.8853403 0.813926 0.7933140 0.7689340 0.7572400 0.68785089 0.8569354 0.8167307 0.8583766 0.8419577 0.910329 0.917842 0.8002993 0.8372205 0.774179 0.844265 0.7513599 0.8551576 0.9247799 0.912719 0.66244629 0.0628208 0.88776780 0.75458588 0.7189275 0.7376987 0.9227242 0.8989613 0.869713 0.7369862 0.9290052 4 0.8320234 0.8554881 -0.02544267 7 0.849127 0.866420 -0.01729340 0.919021 8.7345e-02 insignificant 1 1.0000e+00 insignificant 0.9480696 3.1092e-03 weaklyHypometh 1 3.0407e-01 insignificant -4.6918e-02 0.1590729 insignificant 1 insignificant 0.8320234 0.6388889 0.19219970 7 0.849127 0.673913 0.17521413 9.5305e-10 9.9361e-01 weaklyHypermeth 1.4015e-08 1.0000e+00 weaklyHypermeth 5.8993e-04 8.1500e-01 weaklyHypermeth 7.4675e-03 1.0000e+00 weaklyHypermeth 0.18990168 2.0016e-01 insignificant 1.0000e+00 insignificant 0.832023 0.8905059 -0.0573133 7 0.849127 0.859060 -0.00993372 8.7881e-01 1.7678e-02 weaklyHypometh 1.0000e+00 4.1111e-01 insignificant 9.9148e-01 1.0432e-02 weaklyHypometh 1.0000e+00 3.8636e-01 insignificant -0.0394922 4.3515e-01 insignificant 1.0000000 insignificant 0.855488 0.6388889 0.2171194 7 0.866420 0.673913 1.9251e-01 2.8061e-08 9.9941e-01 hypermethylated 4.1882e-07 1.0000e+00 hypermethylated 1.0888e-03 9.6549e-01 weaklyHypermeth 1.3782e-02 1.0000e+00 weaklyHypermeth 0.2368198 1.2344e-01 insignificant 8.0154e-01 insignificant 0.8554881 0.8905059 -0.02569593 7 0.866420 0.859060 0.00735968 8.7393e-01 1.5117e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.0950e-01 0.45758114 insignificant 1.0000e+00 1.00000 insignificant 7.4260e-03 8.7407e-01 insignificant 1.000000 insignificant 0.6388889 0.890506 -0.24593768 7 0.673913 0.859060 -0.1851478 9.9988e-01 1.0122e-03 weaklyHypometh 1.0000e+00 1.0769e-02 weaklyHypometh 9.9986e-01 1.7430e-02 weaklyHypometh 1.0000e+00 1.7430e-01 insignificant -0.2293938 1.3760e-01 insignificant 9.7586e-01 insignificant chr15 99525550 99526550 48031 LRRK1 ENSG00000154237 0.7804522 325 7 0.723117 161 4 0.7991178 276 9 0.8827183 296 7 0.906389 123 7 0.922652 216 7 0.8116790 177 5 0.751765 222 9 0.8762685 298 9 0.9227878 299 7 0.926530 278 10 0.834392 175 4 0.9330673 230 7 0.7964825 180 7 0.803487 251 4 0.7171382 175 4 0.5333333 12 0 0.5344241 394 7 0.885112 193 4 0.856878 172 7 0.812302 49 6 0.8290985 92 5 0.862654 193 7 0.955784 99 7 0.7725941 72 5 0.9068585 232 8 0.726273 199 8 0.884074 112 4 0.8239034 213 7 0.858827 198 7 0.9415029 157 9 0.907820 198 7 0.6944928 128 7 0.0460213 116 4 1.000000 113 4 0.6224490 33 4 0.712614 147 7 0.6443496 219 7 0.8944968 304 7 0.8217361 290 7 0.8536958 318 7 0.7169180 252 7 0.960062 279 7 0.8474233 0.6438466 0.725431 0.8839523 0.8196236 0.9090694 0.8965648 0.8006399 0.7997700 0.8752822 0.899786 0.8629853 0.8853403 0.813926 0.7933140 0.7689340 0.7572400 0.68785089 0.8569354 0.8167307 0.8583766 0.8419577 0.910329 0.917842 0.8002993 0.8372205 0.774179 0.844265 0.7513599 0.8551576 0.9247799 0.912719 0.66244629 0.0628208 0.88776780 0.75458588 0.7189275 0.7376987 0.9227242 0.8989613 0.869713 0.7369862 0.9290052 4 0.8320234 0.8554881 -0.02544267 7 0.849127 0.866420 -0.01729340 0.919021 8.7345e-02 insignificant 1 1.0000e+00 insignificant 0.9480696 3.1092e-03 weaklyHypometh 1 3.0407e-01 insignificant -4.6918e-02 0.1590729 insignificant 1 insignificant 0.8320234 0.6388889 0.19219970 7 0.849127 0.673913 0.17521413 9.5305e-10 9.9361e-01 weaklyHypermeth 1.4015e-08 1.0000e+00 weaklyHypermeth 5.8993e-04 8.1500e-01 weaklyHypermeth 7.4675e-03 1.0000e+00 weaklyHypermeth 0.18990168 2.0016e-01 insignificant 1.0000e+00 insignificant 0.832023 0.8905059 -0.0573133 7 0.849127 0.859060 -0.00993372 8.7881e-01 1.7678e-02 weaklyHypometh 1.0000e+00 4.1111e-01 insignificant 9.9148e-01 1.0432e-02 weaklyHypometh 1.0000e+00 3.8636e-01 insignificant -0.0394922 4.3515e-01 insignificant 1.0000000 insignificant 0.855488 0.6388889 0.2171194 7 0.866420 0.673913 1.9251e-01 2.8061e-08 9.9941e-01 hypermethylated 4.1882e-07 1.0000e+00 hypermethylated 1.0888e-03 9.6549e-01 weaklyHypermeth 1.3782e-02 1.0000e+00 weaklyHypermeth 0.2368198 1.2344e-01 insignificant 8.0154e-01 insignificant 0.8554881 0.8905059 -0.02569593 7 0.866420 0.859060 0.00735968 8.7393e-01 1.5117e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.0950e-01 0.45758114 insignificant 1.0000e+00 1.00000 insignificant 7.4260e-03 8.7407e-01 insignificant 1.000000 insignificant 0.6388889 0.890506 -0.24593768 7 0.673913 0.859060 -0.1851478 9.9988e-01 1.0122e-03 weaklyHypometh 1.0000e+00 1.0769e-02 weaklyHypometh 9.9986e-01 1.7430e-02 weaklyHypometh 1.0000e+00 1.7430e-01 insignificant -0.2293938 1.3760e-01 insignificant 9.7586e-01 insignificant chr15 99809850 99810850 48039 PCSK6 ENSG00000140479 0.9469459 445 8 0.811757 339 11 0.7608141 150 10 0.9340517 442 11 0.902889 110 6 0.937967 660 11 0.8672920 156 11 0.897495 174 10 0.9333113 89 9 0.9247253 37 3 0.911324 435 11 0.836364 38 3 0.8388095 101 8 0.9888889 43 4 0.995455 85 6 0.9926471 45 3 0.7222222 17 1 0.8826088 342 7 0.960830 120 6 0.932236 534 11 0.918641 67 7 0.6847718 79 6 0.862269 212 11 0.901006 141 10 0.9010702 83 6 0.9150382 338 11 0.749242 83 5 0.983516 52 4 0.9418082 120 6 0.935935 275 10 0.9106906 336 10 0.830407 558 11 0.7660486 207 6 0.8916273 92 7 0.900000 110 5 0.9714286 43 3 0.504344 229 9 0.8242346 333 11 0.7903306 740 11 0.7578990 589 11 0.7932017 566 11 0.5294534 217 6 0.846814 572 11 0.9435404 0.7959387 0.764964 0.9401754 0.8711422 0.9248894 0.8680024 0.8919160 0.8681689 0.9357181 0.898659 0.9104895 0.8660007 0.916887 0.9806103 0.9532906 0.8370686 0.89316260 0.9537749 0.9233080 0.8603518 0.6573292 0.875361 0.903014 0.9252490 0.9167068 0.891444 0.886303 0.9222316 0.9316621 0.9275273 0.929239 0.87916360 0.9344368 0.94337828 0.97378087 0.8590112 0.7449037 0.8259589 0.7417428 0.785995 0.5934062 0.8902771 1 0.9050459 0.9102180 -0.00241159 10 0.914795 0.908410 0.00638499 0.493216 9.2121e-01 insignificant 1 1.0000e+00 insignificant 0.6234002 9.8118e-01 insignificant 1 1.0000e+00 insignificant 2.1065e-02 0.4863125 insignificant 1 insignificant 0.9050894 0.8359684 0.07364427 8 0.921349 0.668047 0.25330213 2.6818e-08 9.0314e-01 weaklyHypermeth 3.3523e-07 1.0000e+00 weaklyHypermeth 1.9152e-01 9.1730e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.08931782 2.4880e-01 insignificant 1.0000e+00 insignificant 0.905002 0.8174367 0.0978729 11 0.907049 0.772273 0.13477556 5.9021e-13 9.7268e-01 weaklyHypermeth 1.1804e-10 1.0000e+00 weaklyHypermeth 4.8950e-08 9.9999e-01 weaklyHypermeth 1.6317e-05 1.0000e+00 weaklyHypermeth 0.1553919 4.5857e-02 weaklyHypermeth 0.6645901 insignificant 0.910295 0.8351431 0.0821689 7 0.921494 0.620329 3.0116e-01 1.0761e-03 9.4296e-01 weaklyHypermeth 8.8206e-03 1.0000e+00 weaklyHypermeth 3.2043e-01 9.2393e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0682524 3.7637e-01 insignificant 1.0000e+00 insignificant 0.9101027 0.8174367 0.08977767 10 0.900084 0.772273 0.12781012 6.3986e-07 8.5429e-01 weaklyHypermeth 2.7820e-05 1.0000e+00 weaklyHypermeth 2.2345e-05 0.99717772 weaklyHypermeth 2.0313e-03 1.00000 weaklyHypermeth 1.3433e-01 7.1282e-02 insignificant 1.000000 insignificant 0.8376238 0.817437 -0.00883002 8 0.789510 0.772273 0.0172367 8.8814e-05 2.7641e-02 weaklyHypometh 1.1102e-02 1.9195e-01 weaklyHypometh 2.3046e-03 9.7420e-01 inconclusive 2.3046e-01 1.0000e+00 insignificant 0.0660741 4.6841e-01 insignificant 1.0000e+00 insignificant chr16 3650 4650 48051 NA 0.9388697 113 3 0.863939 109 4 0.8194139 116 5 0.9803241 73 3 0.833317 87 5 0.700151 195 4 0.8485649 127 5 0.921158 249 5 0.9281040 122 5 0.8658691 156 5 0.926273 239 3 0.801058 28 3 0.5747219 154 3 0.9125000 33 2 0.880309 95 3 0.4977273 45 3 0.6000000 15 2 0.8813063 107 5 0.909995 239 5 0.896566 166 3 0.896852 79 5 0.9183635 83 5 0.923492 99 5 0.819199 88 5 0.9054545 54 5 0.9058878 164 5 0.790051 171 5 0.781176 61 5 0.9317069 238 5 0.926713 157 5 0.9362519 84 3 0.925153 186 3 0.8303678 106 5 0.7109441 186 5 0.933559 102 2 0.8266667 22 3 0.786111 85 5 0.6048804 212 3 0.9175466 69 3 0.8933873 163 5 0.8971927 122 5 0.9429091 72 4 0.931528 123 5 0.9149462 0.8114516 0.744530 0.9759779 0.7720014 0.9057850 0.8194836 0.9361751 0.9049648 0.9085855 0.878601 0.8344023 0.9702235 0.909779 0.8719040 0.4622294 0.5957068 0.89719311 0.9197598 0.8779277 0.8763039 0.9770408 0.904762 0.812911 0.9158936 0.9461966 0.847003 0.743297 0.8971036 0.9476619 0.9203946 0.913211 0.90014515 0.8272677 0.90200010 0.72448980 0.8630952 0.5476046 0.8963493 0.8862315 0.897141 0.9652814 0.9293408 2 0.8841167 0.8913934 -0.00956407 5 0.875498 0.879489 -0.00399166 0.773872 5.4760e-01 insignificant 1 1.0000e+00 insignificant 0.9126739 3.4159e-01 insignificant 1 1.0000e+00 insignificant -5.9350e-02 0.0908585 lowCoverage 1 lowCoverage 0.8841167 0.7671809 0.10918610 5 0.875498 0.739547 0.13595049 1.6309e-04 9.9950e-01 weaklyHypermeth 1.3591e-03 1.0000e+00 weaklyHypermeth 1.9248e-02 8.2885e-01 weaklyHypermeth 1.5908e-01 1.0000e+00 insignificant 0.04692017 4.1279e-01 lowCoverage 1.0000e+00 lowCoverage 0.884117 0.9125683 -0.0339707 5 0.875498 0.914369 -0.03887146 9.8429e-01 1.6767e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9429e-01 1.2737e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0875044 1.0176e-02 lowCoverage 0.2422763 lowCoverage 0.891393 0.7671809 0.1200836 5 0.879489 0.739547 1.3994e-01 9.0808e-05 9.9908e-01 weaklyHypermeth 8.3310e-04 1.0000e+00 weaklyHypermeth 1.1509e-03 9.1279e-01 weaklyHypermeth 1.4386e-02 1.0000e+00 weaklyHypermeth 0.1062703 7.0720e-02 lowCoverage 5.6576e-01 lowCoverage 0.8913934 0.9125683 -0.02307690 5 0.879489 0.914369 -0.03487980 9.6746e-01 1.3672e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.1109e-01 0.41598610 insignificant 1.0000e+00 1.00000 insignificant -2.8154e-02 1.5983e-01 lowCoverage 1.000000 lowCoverage 0.7671809 0.912568 -0.16022010 5 0.739547 0.914369 -0.1748219 9.9993e-01 1.7677e-04 weaklyHypometh 1.0000e+00 2.3887e-03 weaklyHypometh 9.9486e-01 1.0462e-03 weaklyHypometh 1.0000e+00 2.0209e-02 weaklyHypometh -0.1344246 3.2421e-02 lowCoverage 3.4882e-01 lowCoverage chr16 314550 315550 48058 PDIA2 ENSG00000185615 0.6499398 553 11 0.534856 328 10 0.5206382 365 10 0.7534785 303 11 0.754878 179 9 0.787754 543 11 0.7498208 215 8 0.807186 375 10 0.7081765 281 10 0.6470877 231 10 0.744112 358 10 0.683104 188 10 0.7371270 411 10 0.8603175 95 3 0.747587 266 10 0.5610471 95 8 0.7089040 102 7 0.6016378 544 11 0.663073 358 11 0.862415 389 11 0.841194 99 6 0.7127453 159 8 0.516405 285 10 0.694087 123 10 0.8571517 117 8 0.7657063 508 11 0.790174 199 10 0.656900 132 6 0.8300927 420 10 0.853266 602 10 0.6936782 525 10 0.766033 481 11 0.5687327 364 10 0.8624489 280 10 0.623571 120 4 0.7252286 124 9 0.669916 192 10 0.7743469 548 13 0.7798642 485 13 0.7008454 434 11 0.7623707 420 11 0.7714600 362 11 0.637536 477 14 0.7880292 0.6361826 0.480076 0.6644495 0.7527718 0.7940702 0.6721087 0.7610392 0.6895232 0.5973419 0.715256 0.6453704 0.7183901 0.687913 0.7260939 0.6182257 0.7398621 0.69374847 0.8736073 0.8235772 0.8725465 0.6409156 0.757237 0.717199 0.7997666 0.7753715 0.757434 0.668837 0.7670924 0.7646409 0.7116003 0.697709 0.55201251 0.7725671 0.62620086 0.66069647 0.7594417 0.8927866 0.7054784 0.7401472 0.646247 0.6983800 0.5987348 5 0.7466364 0.7852035 -0.03779924 10 0.666315 0.644436 0.02187812 0.939364 2.6398e-01 insignificant 1 1.0000e+00 insignificant 0.9999171 7.3368e-02 insignificant 1 1.0000e+00 insignificant -4.3963e-02 0.2364130 insignificant 1 insignificant 0.7469156 0.7974138 -0.05447509 10 0.691249 0.667708 0.02354071 7.2756e-01 3.8580e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.8087e-01 4.8487e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 0.00011624 9.9815e-01 insignificant 1.0000e+00 insignificant 0.747319 0.7172414 0.0176282 10 0.761427 0.744742 0.01668533 9.8848e-02 2.8975e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.7095e-01 3.3829e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0262582 4.6728e-01 insignificant 1.0000000 insignificant 0.785047 0.7971727 -0.0135655 10 0.661720 0.649074 1.2646e-02 7.3201e-01 5.2938e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4358e-01 8.3039e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0440789 4.1814e-01 insignificant 1.0000e+00 insignificant 0.7861670 0.7167126 0.04498666 10 0.716286 0.717314 -0.00102820 6.9923e-03 4.7509e-01 weaklyHypermeth 1.3985e-01 1.0000e+00 insignificant 1.1631e-01 0.93538629 insignificant 1.0000e+00 1.00000 insignificant 1.7704e-02 6.6219e-01 insignificant 1.000000 insignificant 0.7983970 0.717241 0.05325959 11 0.763095 0.744742 0.0183531 5.1338e-02 8.5791e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.2236e-01 9.8248e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0263745 6.1969e-01 insignificant 1.0000e+00 insignificant chr16 524850 525850 48066 SOLH ENSG00000103326 0.9091046 541 15 0.706948 302 14 0.7829365 388 14 0.8740173 727 14 0.890689 222 13 0.879641 715 13 0.7641890 281 13 0.768436 362 14 0.7457850 229 14 0.9351737 372 14 0.900476 428 14 0.795721 158 13 0.8827132 368 14 0.9477885 231 13 0.681342 362 14 0.7958986 89 7 0.6309524 21 1 0.8920712 1533 13 0.912465 550 14 0.918010 530 14 0.926622 186 13 0.9307198 309 13 0.818913 357 15 0.903526 187 13 0.8175846 372 13 0.9034772 458 14 0.785239 345 14 0.813384 116 12 0.8557992 544 15 0.961887 505 14 0.9564175 457 14 0.879179 644 14 0.3554299 484 14 0.3865301 549 15 0.469904 455 11 0.6894587 65 4 0.341322 358 14 0.5840658 668 14 0.9048399 414 13 0.8060401 544 14 0.8444088 441 12 0.9244795 779 14 0.891921 391 13 0.9184540 0.8608570 0.777174 0.9410776 0.8948936 0.9352486 0.8697845 0.9248848 0.8980709 0.9342731 0.890089 0.8159114 0.9216671 0.944122 0.8263570 0.8215905 0.7960252 0.85408410 0.8819173 0.9526215 0.9156556 0.9384337 0.903847 0.960136 0.8553703 0.9029344 0.920921 0.880153 0.9488395 0.9599143 0.9578867 0.907881 0.32229807 0.3817086 0.47090315 0.53636219 0.3756598 0.6100526 0.9231741 0.9146998 0.930896 0.9610556 0.9104074 11 0.9004530 0.9244693 -0.02669756 14 0.818415 0.768344 0.05007066 0.978032 1.9134e-01 insignificant 1 1.0000e+00 insignificant 0.9984899 1.3236e-01 insignificant 1 1.0000e+00 insignificant -4.8678e-02 0.0816875 insignificant 1 insignificant 0.9003597 0.4020938 0.45784822 14 0.832818 0.421508 0.41131024 2.7831e-74 9.9557e-01 hypermethylated 4.6384e-72 1.0000e+00 hypermethylated 6.2274e-16 9.9997e-01 hypermethylated 5.6613e-14 1.0000e+00 hypermethylated 0.35959945 8.3373e-04 hypermethylated 2.1378e-02 hypermethylated 0.900775 0.9348928 -0.0278533 13 0.840154 0.839313 0.00084036 6.0998e-01 1.1526e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3868e-01 2.1127e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0436199 1.6890e-01 insignificant 1.0000000 insignificant 0.925213 0.4022498 0.4854000 14 0.842884 0.444925 3.9796e-01 1.2705e-63 9.9999e-01 hypermethylated 2.1175e-61 1.0000e+00 hypermethylated 3.0678e-14 1.0000e+00 hypermethylated 2.7889e-12 1.0000e+00 hypermethylated 0.4082773 4.9782e-04 hypermethylated 1.4642e-02 hypermethylated 0.9250727 0.9348165 -0.00108674 13 0.817710 0.824010 -0.00629985 6.8438e-01 6.4752e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.0203e-01 0.94521403 insignificant 1.0000e+00 1.00000 insignificant 5.0580e-03 8.5912e-01 insignificant 1.000000 insignificant 0.4020938 0.935050 -0.49079557 13 0.421508 0.861124 -0.4396163 1.0000e+00 1.9527e-31 hypomethylated 1.0000e+00 3.2546e-29 hypomethylated 1.0000e+00 4.5207e-08 hypomethylated 1.0000e+00 3.2291e-06 hypomethylated -0.4032194 4.5253e-04 hypomethylated 1.9675e-02 hypomethylated chr16 617650 618650 48069 ENSG00000196674 0.8429165 741 20 0.796677 378 20 0.6540808 420 20 0.9087433 769 20 0.875774 225 22 0.914962 745 21 0.8645969 308 20 0.816693 421 16 0.7120822 301 20 0.8589066 403 17 0.900964 651 22 0.818116 198 19 0.7724238 513 22 0.8410809 266 12 0.926569 410 20 0.8333333 127 11 0.5484848 77 8 0.8079440 989 20 0.765350 572 20 0.856940 639 22 0.820714 235 16 0.8389710 336 18 0.869931 421 20 0.775733 169 10 0.8706826 581 19 0.9287491 538 23 0.783597 350 21 0.668633 148 13 0.8964616 464 17 0.909588 532 19 0.8704721 528 17 0.909958 775 22 0.9049746 338 16 0.8374338 453 20 0.819820 273 12 0.9382538 179 16 0.636998 289 14 0.8967684 565 17 0.9487929 738 20 0.9267210 710 20 0.9009671 625 20 0.8874641 934 20 0.857090 724 20 0.8645085 0.7255889 0.685262 0.9034343 0.8798114 0.9192267 0.8780459 0.8528169 0.7385215 0.8896874 0.868038 0.8125180 0.7602546 0.859750 0.9139283 0.7848912 0.7990617 0.87080353 0.8782238 0.8824870 0.9630129 0.8529607 0.907254 0.884669 0.9563450 0.9169373 0.836712 0.792895 0.8506444 0.9104380 0.8483282 0.872572 0.94487770 0.9196161 0.83779669 0.90284254 0.8106040 0.9459877 0.9211201 0.9233980 0.943352 0.9217408 0.9282993 9 0.8674831 0.8907513 -0.02141068 21 0.716237 0.741961 -0.02572401 0.999902 1.5038e-01 insignificant 1 1.0000e+00 insignificant 0.9999997 2.6920e-02 weaklyHypometh 1 9.4336e-01 insignificant -2.9459e-02 0.3304976 insignificant 1 insignificant 0.8679369 0.9055344 -0.03564004 20 0.807841 0.780932 0.02690831 9.4467e-01 2.5188e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9980e-01 3.5667e-04 weaklyHypometh 1.0000e+00 5.0952e-02 weaklyHypometh -0.02320956 6.4842e-01 insignificant 1.0000e+00 insignificant 0.868061 0.9345669 -0.0598621 20 0.842644 0.880234 -0.03758954 9.9159e-01 9.8649e-05 weaklyHypometh 1.0000e+00 1.6441e-02 weaklyHypometh 9.9899e-01 1.0777e-05 weaklyHypometh 1.0000e+00 3.5922e-03 weaklyHypometh -0.0883750 3.1951e-03 weaklyHypometh 0.1065020 insignificant 0.891790 0.9051025 -0.0141616 20 0.826464 0.754901 7.1563e-02 6.6946e-01 3.4002e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.0785e-01 4.9968e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0062494 9.0216e-01 insignificant 1.0000e+00 insignificant 0.8922345 0.9348351 -0.03569663 20 0.831926 0.915948 -0.08402261 9.9954e-01 1.7807e-02 weaklyHypometh 1.0000e+00 6.8351e-01 insignificant 9.9453e-01 0.44023873 insignificant 1.0000e+00 1.00000 insignificant -5.8916e-02 4.3239e-02 weaklyHypometh 0.785181 insignificant 0.9063992 0.934818 -0.02199610 19 0.838779 0.912835 -0.0740561 6.9018e-01 3.9262e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.7577e-01 9.5604e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0651654 2.1302e-01 insignificant 1.0000e+00 insignificant chr16 671550 672550 48070 STUB1 ENSG00000103266 0.7743412 219 7 0.813690 231 7 0.6795746 212 7 0.9457860 222 7 0.858362 92 7 0.916615 251 7 0.8321548 135 7 0.948925 186 7 0.8835835 141 7 0.9309899 122 7 0.853873 222 7 0.815018 76 6 0.9023498 209 7 0.9777778 40 2 0.790594 109 7 0.9345238 23 2 0.6295918 39 5 0.7071003 132 7 0.929247 262 7 0.964214 195 7 0.721196 94 7 0.8720920 141 7 0.852403 174 7 0.782305 104 6 0.8550837 105 7 0.8497379 308 7 0.756217 128 6 0.681371 106 7 0.8483713 253 7 0.934241 197 7 0.8848381 371 7 0.795753 270 7 0.3767278 218 7 0.4260225 193 7 0.590909 85 2 0.1031746 37 5 0.334375 110 7 0.4506448 318 7 0.9228578 225 7 0.9178378 279 7 0.9123449 128 6 0.8863035 130 7 0.860223 109 7 0.8963413 0.8254888 0.680576 0.9495594 0.8035669 0.9138247 0.8025740 0.9390833 0.8891178 0.9258085 0.842847 0.8066084 0.9034628 0.890954 0.7695939 0.8964211 0.6964883 0.69721939 0.9226643 0.9545193 0.7342862 0.8426149 0.840772 0.827832 0.8394582 0.8450450 0.856352 0.770379 0.8764163 0.9269495 0.8748875 0.904032 0.31460538 0.3754997 0.27347913 0.19610005 0.3529592 0.4526417 0.9138591 0.9108058 0.917189 0.8698099 0.8539865 6 0.8705845 0.8738339 0.00096272 7 0.786185 0.784961 0.00122393 0.931854 9.0666e-01 insignificant 1 1.0000e+00 insignificant 0.4504994 9.9833e-01 insignificant 1 1.0000e+00 insignificant 3.4948e-02 0.2632328 insignificant 1 insignificant 0.8705013 0.4942768 0.40665800 7 0.759458 0.376460 0.38299839 4.8907e-35 9.9714e-01 hypermethylated 2.8769e-33 1.0000e+00 hypermethylated 2.2985e-10 1.0000e+00 hypermethylated 1.2770e-08 1.0000e+00 hypermethylated 0.47410665 4.3233e-04 hypermethylated 1.3101e-02 hypermethylated 0.870626 0.9001148 -0.0416722 7 0.853208 0.920040 -0.06683130 9.9343e-01 9.2344e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4575e-01 2.5571e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0454978 8.2888e-02 insignificant 0.9224952 insignificant 0.873778 0.4942768 0.3813841 7 0.758081 0.376460 3.8162e-01 7.1723e-34 9.9539e-01 hypermethylated 4.7816e-32 1.0000e+00 hypermethylated 4.5205e-10 9.9997e-01 hypermethylated 2.6591e-08 1.0000e+00 hypermethylated 0.4391585 6.9383e-04 hypermethylated 1.9273e-02 hypermethylated 0.8753339 0.9000000 -0.04260631 7 0.866379 0.908617 -0.04223797 9.9260e-01 3.8817e-02 weaklyHypometh 1.0000e+00 9.7043e-01 insignificant 9.9594e-01 0.01341605 weaklyHypometh 1.0000e+00 0.62189 insignificant -8.0446e-02 4.6334e-03 weaklyHypometh 0.308891 insignificant 0.4958246 0.900000 -0.49951363 7 0.430240 0.908617 -0.4783768 9.9999e-01 1.9127e-19 hypomethylated 1.0000e+00 1.2751e-17 hypomethylated 1.0000e+00 1.0562e-07 hypomethylated 1.0000e+00 7.0411e-06 hypomethylated -0.5196045 4.2857e-04 hypomethylated 1.9480e-02 hypomethylated chr16 702850 703850 48071 FBXL16 ENSG00000127585 0.6028872 240 8 0.556446 217 7 0.5981051 148 7 0.5949194 304 8 0.727941 79 7 0.796148 221 8 0.6199230 82 6 0.699337 115 7 0.5455267 80 7 0.7089286 59 7 0.647555 295 8 0.507407 43 4 0.6247619 108 7 0.7317460 72 7 0.734711 61 4 0.6095238 25 4 0.8000000 6 0 0.5895641 344 10 0.784472 109 7 0.466023 186 7 0.729190 58 8 0.8809524 15 1 0.684751 140 8 0.634603 95 7 0.6439470 94 6 0.7343082 156 7 0.697199 103 7 0.443939 42 3 0.7751082 156 7 0.649729 126 7 0.7284253 163 7 0.727837 228 8 0.5048675 115 7 0.6010913 123 7 0.692925 175 8 0.5000000 10 0 0.413745 136 6 0.6083872 178 7 0.6146693 336 8 0.5311394 341 8 0.6543521 308 8 0.7102841 268 6 0.622177 316 8 0.6376098 0.6112527 0.607406 0.7149762 0.6839923 0.7529149 0.5641962 0.6611401 0.5328324 0.7248244 0.662109 0.5427587 0.6454957 0.754189 0.5847988 0.8021858 0.7132424 0.71215921 0.7848539 0.6742994 0.6324514 0.7824199 0.636350 0.623655 0.6636937 0.6862369 0.583387 0.364617 0.7592595 0.6135975 0.6908156 0.714200 0.60559234 0.5039357 0.68876567 0.50141028 0.5726824 0.6780255 0.6410108 0.6790212 0.693977 0.7136686 0.6803520 1 0.6646385 0.6925872 -0.01251935 8 0.565248 0.678142 -0.11289407 0.918512 2.3542e-01 insignificant 1 1.0000e+00 insignificant 0.8211831 2.5589e-01 insignificant 1 1.0000e+00 insignificant -4.6869e-02 0.2158514 insignificant 1 insignificant 0.6646385 0.6350068 0.05120144 8 0.565248 0.539509 0.02573919 6.2846e-02 8.5097e-01 insignificant 3.2229e-01 1.0000e+00 insignificant 1.1273e-01 9.9516e-01 insignificant 6.4349e-01 1.0000e+00 insignificant 0.09379356 7.5447e-02 insignificant 6.1339e-01 insignificant 0.665115 0.6511480 -0.0050278 8 0.608729 0.560456 0.04827231 7.7221e-01 7.9599e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.4848e-01 9.2158e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0207719 5.8101e-01 insignificant 1.0000000 insignificant 0.692587 0.6350068 0.0629069 8 0.678142 0.539509 1.3863e-01 1.7065e-01 9.9697e-01 insignificant 8.1260e-01 1.0000e+00 insignificant 8.8876e-02 9.9985e-01 insignificant 5.3864e-01 1.0000e+00 insignificant 0.1406630 1.8305e-02 weaklyHypermeth 2.1139e-01 insignificant 0.6921397 0.6511480 0.00719842 8 0.653384 0.560456 0.09292746 4.7094e-01 9.2786e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.2902e-01 0.89711259 insignificant 1.0000e+00 1.00000 insignificant 6.7641e-02 1.3107e-01 insignificant 1.000000 insignificant 0.6358696 0.651148 -0.05256990 8 0.581010 0.560456 0.0205532 9.2351e-01 1.8907e-01 insignificant 1.0000e+00 9.1024e-01 insignificant 9.9718e-01 3.3334e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0730217 1.7974e-01 insignificant 1.0000e+00 insignificant chr16 744050 745050 48073 NARFL ENSG00000103245 0.9205408 263 6 0.851488 107 6 0.7957974 129 7 0.8040225 324 6 0.753741 77 7 0.800629 261 7 0.8785063 183 7 0.778266 79 6 0.6758297 107 7 0.9244048 101 7 0.851054 194 7 0.829082 66 6 0.6456044 133 6 1.0000000 2 0 0.738192 96 6 0.7000000 51 6 0.6496599 43 7 0.8805011 370 6 0.718263 101 6 0.751333 146 7 0.958333 50 7 0.8397351 95 6 0.819979 176 6 0.704221 78 7 0.8647036 130 6 0.7566293 117 7 0.691235 56 5 0.824717 69 7 0.8452381 141 7 0.833751 156 7 0.8949784 128 7 0.931672 349 7 0.5707516 118 7 0.6230159 51 6 1.000000 7 0 0.4251424 83 6 0.643667 123 7 0.7391192 92 7 0.8330810 277 6 0.9096966 389 7 0.9186765 228 6 0.7694430 329 6 0.927529 346 6 0.9130059 0.8161730 0.782698 0.7654662 0.7496049 0.8294403 0.8738667 0.7323441 0.7040662 0.9731206 0.857418 0.8818896 0.6330169 0.823574 0.7223574 0.7927660 0.7427558 0.86187796 0.7599291 0.7063240 0.9523050 0.8607102 0.785462 0.717602 0.8379169 0.7684532 0.706732 0.878433 0.8394124 0.8659548 0.9259291 0.923061 0.57630371 0.6460993 0.69838479 0.45977766 0.6620505 0.8095045 0.9040070 0.9212195 0.906218 0.7602966 0.9143733 6 0.8037416 0.8491909 -0.03950246 7 0.800328 0.835376 -0.03504845 0.707568 2.1049e-01 insignificant 1 1.0000e+00 insignificant 0.6136867 2.7631e-01 insignificant 1 1.0000e+00 insignificant -3.3087e-02 0.3089916 insignificant 1 insignificant 0.8037416 0.6265823 0.17542043 7 0.800328 0.621354 0.17897390 1.2456e-10 1.0000e+00 weaklyHypermeth 2.0420e-09 1.0000e+00 weaklyHypermeth 2.3343e-04 9.9998e-01 weaklyHypermeth 3.3347e-03 1.0000e+00 weaklyHypermeth 0.13039634 1.6358e-01 insignificant 1.0000e+00 insignificant 0.803742 0.8680688 -0.0606120 6 0.800328 0.855968 -0.05564044 9.8815e-01 7.3999e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7376e-01 6.8385e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0743395 7.9968e-02 insignificant 0.9087262 insignificant 0.849191 0.6265823 0.2150134 7 0.835376 0.621354 2.1402e-01 1.8912e-09 1.0000e+00 hypermethylated 3.3772e-08 1.0000e+00 hypermethylated 4.4809e-05 1.0000e+00 hypermethylated 9.3352e-04 1.0000e+00 hypermethylated 0.1634832 9.4746e-02 insignificant 6.6723e-01 insignificant 0.8491909 0.8680688 -0.01632389 6 0.835376 0.855968 -0.02059199 9.6083e-01 1.0567e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7186e-01 0.08559791 insignificant 1.0000e+00 1.00000 insignificant -4.1253e-02 3.1305e-01 insignificant 1.000000 insignificant 0.6265823 0.868069 -0.23347145 6 0.621354 0.855968 -0.2346143 1.0000e+00 1.4827e-05 hypomethylated 1.0000e+00 2.6958e-04 hypomethylated 1.0000e+00 1.5146e-04 hypomethylated 1.0000e+00 4.8857e-03 hypomethylated -0.2047358 4.8977e-02 weaklyHypometh 4.8017e-01 insignificant chr16 1172150 1173150 48074 CACNA1H ENSG00000196557 0.8119008 206 10 0.662371 338 10 0.4386462 391 15 0.7007000 164 10 0.551041 165 14 0.722158 422 16 0.7593055 272 16 0.624927 298 10 0.5267747 340 13 0.6692524 342 14 0.708655 497 16 0.589512 233 15 0.2788115 511 15 0.8201582 108 9 0.500758 277 15 0.5496476 168 10 0.2215490 130 7 0.4988029 261 15 0.643509 373 16 0.757103 359 15 0.748333 124 12 0.2729932 128 12 0.797313 272 14 0.702083 153 12 0.7017544 62 2 0.5987281 507 16 0.599248 233 15 0.504261 123 6 0.7019796 376 15 0.556713 634 16 0.6164974 566 16 0.913001 464 16 0.2975581 533 15 0.3587106 368 15 0.246259 594 13 0.1170948 102 7 0.211101 293 19 0.1575106 775 16 0.3868698 337 16 0.4829439 368 15 0.6672359 176 12 0.4086319 337 15 0.549187 207 12 0.9167154 0.6962766 0.618324 0.7845726 0.7551656 0.7757725 0.8389584 0.7718404 0.7602675 0.8657956 0.842236 0.7513899 0.2986886 0.786942 0.6108787 0.6010382 0.5769531 0.54975510 0.6926994 0.7841739 0.8937123 0.3615228 0.867886 0.831411 0.7266150 0.7531305 0.772373 0.750332 0.8296061 0.5778286 0.6821339 0.896920 0.41043193 0.5691657 0.20201220 0.14102720 0.3916094 0.3326645 0.4422424 0.4764918 0.722715 0.5288032 0.5636539 5 0.6932536 0.7235036 -0.03644234 16 0.513572 0.532924 -0.01935258 0.844615 2.6708e-01 insignificant 1 1.0000e+00 insignificant 0.9994564 9.3104e-02 insignificant 1 1.0000e+00 insignificant -4.0963e-02 0.4937325 insignificant 1 insignificant 0.6932536 0.2521576 0.36739735 16 0.513572 0.203091 0.31048113 1.0219e-42 1.0000e+00 hypermethylated 7.8611e-41 1.0000e+00 hypermethylated 5.0248e-22 1.0000e+00 hypermethylated 6.2810e-20 1.0000e+00 hypermethylated 0.37040684 2.2775e-06 hypermethylated 1.2653e-04 hypermethylated 0.693254 0.5312281 0.1866370 15 0.513572 0.447106 0.06646573 7.7145e-15 6.1161e-01 weaklyHypermeth 3.8573e-12 1.0000e+00 weaklyHypermeth 1.3439e-07 9.8610e-01 weaklyHypermeth 1.9198e-05 1.0000e+00 weaklyHypermeth 0.1028055 1.3546e-01 insignificant 1.0000000 insignificant 0.723504 0.2521576 0.4154797 16 0.532924 0.203091 3.2983e-01 2.4808e-40 9.9844e-01 hypermethylated 2.0674e-38 1.0000e+00 hypermethylated 2.5457e-17 9.9997e-01 hypermethylated 3.1821e-15 1.0000e+00 hypermethylated 0.4113698 3.6023e-06 hypermethylated 1.8959e-04 hypermethylated 0.7235036 0.5312281 0.22722352 15 0.532924 0.447106 0.08581831 5.2254e-15 9.9959e-01 hypermethylated 1.7418e-12 1.0000e+00 hypermethylated 3.3511e-05 0.99994694 hypermethylated 2.5778e-03 1.00000 hypermethylated 1.4377e-01 6.1863e-02 insignificant 0.923331 insignificant 0.2521576 0.531228 -0.15080703 15 0.203091 0.447106 -0.2440154 9.9999e-01 4.4575e-08 weaklyHypometh 1.0000e+00 1.2736e-06 weaklyHypometh 1.0000e+00 3.3979e-06 weaklyHypometh 1.0000e+00 1.7884e-04 weaklyHypometh -0.2676014 3.0797e-03 weaklyHypometh 7.8968e-02 weaklyHypometh chr16 1289050 1290050 48075 ENSG00000196364 0.8609268 236 7 0.844918 484 7 0.8355727 290 7 0.9353907 256 7 0.696489 219 7 0.843163 389 7 0.8595879 396 7 0.887625 262 7 0.6686702 225 7 0.9250482 178 7 0.909325 411 7 0.761161 88 7 0.6113665 228 7 0.8856749 205 7 0.892652 348 7 0.8458333 98 6 0.5500000 441 2 0.8927555 265 7 0.716825 672 8 0.764426 341 7 0.738274 108 7 0.6747475 53 3 0.881093 172 7 0.575586 195 7 0.7818452 58 3 0.8841775 575 9 0.822292 253 7 0.785486 100 7 0.8047822 513 7 0.909623 561 7 0.8709294 640 9 0.953996 328 7 0.6622842 355 7 0.7631646 326 7 0.782629 422 9 0.3333333 21 3 0.726801 327 8 0.7334169 498 9 0.8715672 356 7 0.8448246 306 9 0.7525070 184 7 0.8598395 305 7 0.874610 191 9 0.8350057 0.7102546 0.711853 0.8592054 0.6733862 0.9113389 0.7613806 0.8103499 0.8361210 0.8400167 0.887149 0.7997399 0.5487523 0.817513 0.8185885 0.7486148 0.8607803 0.85560748 0.5931957 0.6759004 0.9333268 0.6868911 0.864711 0.652464 0.8202134 0.7337630 0.733740 0.821427 0.7208867 0.7230470 0.6680939 0.916868 0.60440861 0.7066934 0.88505872 0.73372241 0.6011264 0.8894038 0.7512333 0.8366295 0.701007 0.7997726 0.7930819 6 0.8408488 0.8298112 0.02651143 7 0.785365 0.737055 0.04830978 0.104256 9.2661e-01 insignificant 1 1.0000e+00 insignificant 0.4977294 7.7798e-01 insignificant 1 1.0000e+00 insignificant 2.4678e-03 0.9504095 insignificant 1 insignificant 0.8409619 0.7834787 0.06751057 7 0.811307 0.733043 0.07826378 4.2135e-04 9.5804e-01 weaklyHypermeth 3.2918e-03 1.0000e+00 weaklyHypermeth 2.7935e-03 9.7054e-01 weaklyHypermeth 2.9099e-02 1.0000e+00 weaklyHypermeth 0.14243246 9.6497e-02 insignificant 7.4228e-01 insignificant 0.842404 0.8450075 0.0074992 7 0.891597 0.846822 0.04477541 2.0218e-01 4.1750e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.1996e-01 6.2464e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0312992 3.6274e-01 insignificant 1.0000000 insignificant 0.830700 0.7834787 0.0540742 7 0.785878 0.733043 5.2835e-02 9.3065e-04 9.1806e-01 weaklyHypermeth 7.8206e-03 1.0000e+00 weaklyHypermeth 2.2206e-03 9.9366e-01 weaklyHypermeth 2.4614e-02 1.0000e+00 weaklyHypermeth 0.1399647 1.0517e-01 insignificant 7.3038e-01 insignificant 0.8326716 0.8450075 -0.01996521 7 0.861752 0.846822 0.01493027 3.3166e-01 3.3625e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.3887e-01 0.57329959 insignificant 1.0000e+00 1.00000 insignificant -3.3767e-02 3.9106e-01 insignificant 1.000000 insignificant 0.7842024 0.845007 -0.07358658 7 0.714123 0.846822 -0.1326985 9.9748e-01 9.5186e-03 weaklyHypometh 1.0000e+00 7.8021e-02 weaklyHypometh 9.9836e-01 8.3254e-03 weaklyHypometh 1.0000e+00 9.5695e-02 weaklyHypometh -0.1737316 5.3011e-02 insignificant 4.9564e-01 insignificant chr16 1534050 1535050 48077 TMEM204 ENSG00000131634 0.7875410 348 12 0.592746 233 12 0.6196410 131 12 0.7793276 197 11 0.692623 100 7 0.644459 208 12 0.7716503 124 8 0.645758 132 10 0.7385913 90 11 0.7204367 125 12 0.730400 307 12 0.755567 108 8 0.7375601 146 11 0.7479167 72 7 0.724004 154 12 0.8055556 66 8 0.9144689 49 5 0.7220330 302 11 0.655562 163 12 0.846387 223 12 0.552381 43 2 0.8095238 35 4 0.670304 205 12 0.753663 49 5 0.8465368 110 7 0.7509672 214 12 0.729466 102 10 0.672436 52 6 0.5903083 137 8 0.763414 187 11 0.7708324 220 12 0.727017 257 12 0.5821334 175 12 0.5644747 156 11 0.748734 158 12 0.8200758 49 4 0.647016 108 12 0.6825045 174 12 0.7305774 297 11 0.6536154 436 11 0.7482490 304 11 0.8462796 257 8 0.801264 271 11 0.8080433 0.7151123 0.770667 0.8071124 0.7685085 0.8355922 0.7976480 0.7657359 0.8438073 0.7860985 0.800663 0.8302058 0.7991023 0.792289 0.7418179 0.8463303 0.8900099 0.83911562 0.7276199 0.8289673 0.6539755 0.7918164 0.750460 0.776654 0.8686560 0.7635278 0.755765 0.808601 0.7788579 0.7669417 0.8002402 0.806003 0.64269178 0.6391283 0.81441160 0.78797338 0.7370913 0.7675224 0.8008753 0.7906897 0.818935 0.8580441 0.8437860 3 0.7612943 0.7478261 0.00733217 12 0.676361 0.697518 -0.02115672 0.347179 9.5933e-01 insignificant 1 1.0000e+00 insignificant 0.4357087 8.5583e-01 insignificant 1 1.0000e+00 insignificant 1.1874e-02 0.6977180 insignificant 1 insignificant 0.7617008 0.6853659 0.07433254 12 0.714153 0.641650 0.07250231 4.4309e-06 9.9999e-01 weaklyHypermeth 4.6155e-05 1.0000e+00 weaklyHypermeth 2.5860e-03 9.9972e-01 weaklyHypermeth 2.7221e-02 1.0000e+00 weaklyHypermeth 0.05745498 2.2973e-01 insignificant 1.0000e+00 insignificant 0.761701 0.7980831 -0.0254321 11 0.714153 0.741887 -0.02773396 9.4166e-01 2.0031e-02 weaklyHypometh 1.0000e+00 4.3545e-01 insignificant 9.3640e-01 6.7378e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0243858 5.3283e-01 insignificant 1.0000000 insignificant 0.748443 0.6853659 0.0642738 12 0.704129 0.641650 6.2478e-02 7.3729e-03 9.9992e-01 weaklyHypermeth 4.7876e-02 1.0000e+00 weaklyHypermeth 5.8541e-02 9.9861e-01 insignificant 3.8014e-01 1.0000e+00 insignificant 0.0455811 3.5821e-01 insignificant 1.0000e+00 insignificant 0.7484433 0.7980831 -0.03980957 11 0.704129 0.741887 -0.03775795 9.8655e-01 1.2045e-02 weaklyHypometh 1.0000e+00 5.7043e-01 insignificant 9.5251e-01 0.11811114 insignificant 1.0000e+00 1.00000 insignificant -3.6260e-02 3.9961e-01 insignificant 1.000000 insignificant 0.6853659 0.798083 -0.10178568 11 0.641650 0.741887 -0.1002363 9.9997e-01 4.4540e-06 weaklyHypometh 1.0000e+00 9.2792e-05 weaklyHypometh 9.9991e-01 3.2058e-04 weaklyHypometh 1.0000e+00 8.9612e-03 weaklyHypometh -0.0818408 1.4828e-01 insignificant 9.8851e-01 insignificant chr16 1735150 1736150 48079 MAPK8IP3 ENSG00000138834 0.8811353 322 7 0.920131 348 7 0.7596681 93 7 0.9470452 474 7 0.872656 88 7 0.824358 495 7 0.7212276 134 7 0.855042 150 7 0.8949580 131 7 0.9698413 108 5 0.912452 265 7 0.755678 40 2 0.8878317 167 7 0.9566327 85 7 0.928463 134 7 0.8854167 37 4 0.9583333 19 3 0.8377925 492 7 0.945131 231 7 0.940843 361 7 0.915296 92 6 0.9032291 94 5 0.812960 183 7 0.977444 107 7 0.8609766 241 7 0.9392040 333 7 0.739841 100 5 0.879464 55 5 0.9470616 249 7 0.952472 398 7 0.6953323 361 7 0.915090 338 7 0.8610105 302 7 0.9800014 171 7 1.000000 240 4 1.0000000 49 4 0.901899 170 7 0.8767652 335 7 0.9249064 407 7 0.9211150 426 7 0.9264323 417 7 0.8978943 492 7 0.920312 400 7 0.8748112 0.9079408 0.739041 0.9445691 0.8714551 0.9145820 0.7190492 0.8613320 0.8905678 0.9665224 0.892084 0.7489633 0.8727939 0.952153 0.9234370 0.8508781 0.9609582 0.84105804 0.9231229 0.9276153 0.8908318 0.8635948 0.903244 0.988668 0.8268118 0.9324875 0.854580 0.848257 0.9372591 0.9272860 0.8852308 0.905870 0.87032539 0.9717384 0.97173267 0.99052356 0.8708859 0.8734865 0.9251296 0.9182206 0.925858 0.9008218 0.9279948 5 0.9010541 0.9094118 -0.00913221 7 0.810707 0.813627 -0.00291965 0.897297 3.0670e-01 insignificant 1 1.0000e+00 insignificant 0.8432599 3.0703e-01 insignificant 1 1.0000e+00 insignificant 4.5343e-03 0.8812462 insignificant 1 insignificant 0.9010067 0.9083728 -0.00552720 7 0.787046 0.926312 -0.13926663 8.3462e-01 3.2887e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8830e-01 7.2613e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.05388083 1.1201e-01 insignificant 8.2362e-01 insignificant 0.901223 0.9201681 -0.0178116 7 0.899481 0.918599 -0.01911842 7.9757e-01 2.3056e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.7150e-01 1.9414e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0354003 4.8001e-02 weaklyHypometh 0.6665811 insignificant 0.910020 0.9084451 0.0013338 7 0.850664 0.934500 -8.3836e-02 8.2931e-01 3.8709e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8883e-01 1.7451e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0584151 1.3108e-01 insignificant 8.4421e-01 insignificant 0.9110236 0.9201681 -0.00751545 7 0.915139 0.918599 -0.00345982 3.0118e-01 5.1534e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.9614e-01 0.67988264 insignificant 1.0000e+00 1.00000 insignificant -3.9935e-02 1.4789e-01 insignificant 1.000000 insignificant 0.9083004 0.920168 -0.01076914 7 0.915786 0.918599 -0.0028137 4.0693e-01 6.9943e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.3769e-01 9.8797e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0184806 5.1602e-01 insignificant 1.0000e+00 insignificant chr16 2012550 2013550 48084 NPW ENSG00000183971 0.2676770 383 17 0.337463 663 17 0.1794217 807 15 0.2423797 392 13 0.237298 561 17 0.383605 643 19 0.2851400 427 12 0.269481 610 16 0.2542949 675 16 0.2213590 1017 17 0.256508 670 18 0.112553 437 13 0.2901019 566 15 0.2142857 580 14 0.297273 959 12 0.1674242 553 10 0.3591036 57 5 0.1798179 461 13 0.238264 828 12 0.415849 453 19 0.325985 550 16 0.2538889 418 12 0.289514 343 16 0.318929 595 18 0.4066538 277 14 0.1814505 457 15 0.343251 870 13 0.204902 274 16 0.3296827 602 15 0.266657 722 15 0.2130261 623 15 0.349420 542 17 0.3383267 421 15 0.2521917 415 15 0.537879 96 6 0.1929825 177 12 0.218540 453 19 0.2455181 604 19 0.3473940 554 17 0.3042539 424 17 0.3982972 502 16 0.2783069 351 16 0.318379 379 16 0.0644839 0.0479369 0.036757 0.0533800 0.0544689 0.0662476 0.0446417 0.0498151 0.0519355 0.0539611 0.057463 0.0347244 0.0486927 0.040450 0.0466112 0.0477318 0.0535697 0.05631518 0.0446001 0.0524422 0.0478834 0.0479869 0.064924 0.052813 0.0771077 0.0516211 0.047314 0.056017 0.0513600 0.0502902 0.0388719 0.067431 0.03740736 0.0465365 0.03179907 0.03808822 0.0463340 0.0388780 0.0409437 0.0483202 0.051834 0.0353725 0.0414600 10 0.1152765 0.1356608 -0.00444457 17 0.284356 0.289474 -0.00511803 0.547516 6.3539e-01 insignificant 1 1.0000e+00 insignificant 0.8564576 7.1026e-01 insignificant 1 1.0000e+00 insignificant -2.9815e-02 0.2577504 insignificant 1 insignificant 0.1152435 0.1574331 0.03536607 17 0.289235 0.250068 0.03916772 3.1394e-02 9.9873e-01 weaklyHypermeth 1.7249e-01 1.0000e+00 insignificant 3.2557e-01 9.8539e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03710808 5.2256e-01 insignificant 1.0000e+00 insignificant 0.115244 0.0877828 0.0013029 14 0.289235 0.371169 -0.08193384 5.3169e-01 8.9827e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 8.2257e-01 1.3046e-02 inconclusive 1.0000e+00 4.0768e-01 insignificant -0.0688612 2.6275e-02 weaklyHypometh 0.4453321 insignificant 0.135856 0.1574331 0.0458423 17 0.299456 0.250068 4.9388e-02 2.8717e-02 9.9743e-01 weaklyHypermeth 1.6504e-01 1.0000e+00 insignificant 1.5380e-01 9.9480e-01 insignificant 8.2246e-01 1.0000e+00 insignificant -0.0072932 8.9969e-01 insignificant 1.0000e+00 insignificant 0.1358557 0.0877828 0.00197160 14 0.299456 0.371169 -0.07171322 6.8752e-01 3.6054e-02 inconclusive 1.0000e+00 9.7043e-01 insignificant 9.1200e-01 0.05959575 insignificant 1.0000e+00 1.00000 insignificant -3.9046e-02 1.9545e-01 insignificant 1.000000 insignificant 0.1574331 0.087783 -0.01886491 14 0.250068 0.371169 -0.1211016 9.5705e-01 2.3508e-02 weaklyHypometh 1.0000e+00 1.6672e-01 insignificant 9.9988e-01 2.5525e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0317532 5.8966e-01 insignificant 1.0000e+00 insignificant chr16 2022850 2023850 48085 SLC9A3R2 ENSG00000065054 0.7958429 540 22 0.817344 428 17 0.6765243 497 20 0.8639276 653 19 0.759254 237 19 0.826102 598 19 0.7634776 415 22 0.777734 416 18 0.7932191 526 21 0.8667851 517 23 0.759840 530 19 0.779304 244 21 0.5375384 645 25 0.8648528 176 8 0.746062 512 21 0.8690930 151 17 0.6699806 735 14 0.6006119 872 18 0.757237 535 19 0.743778 547 22 0.749208 183 13 0.6429729 208 10 0.815630 513 17 0.794678 201 12 0.8223229 183 10 0.7877090 700 23 0.627317 334 16 0.742387 219 16 0.8673225 496 18 0.744356 780 22 0.7458495 635 22 0.859416 698 18 0.0239274 601 25 0.0353104 409 17 0.041667 193 10 0.1299107 162 8 0.122747 299 18 0.0606040 605 19 0.7261949 605 17 0.7537254 734 20 0.8809140 505 15 0.7703441 529 17 0.755758 569 19 0.8005289 0.7486447 0.588651 0.8554665 0.7458270 0.8368038 0.7355482 0.6970578 0.7051114 0.8207165 0.768453 0.7431895 0.3791308 0.748926 0.6821560 0.8278248 0.5556261 0.54752223 0.6443142 0.6802461 0.8313183 0.5587987 0.842449 0.830424 0.7838952 0.7450159 0.697251 0.773904 0.8320928 0.6230387 0.6778079 0.873721 0.02559988 0.0109559 0.04177374 0.04693878 0.0704815 0.0279468 0.6478288 0.6588217 0.768014 0.6659976 0.6496141 8 0.6837528 0.7679612 -0.07889388 21 0.746743 0.777898 -0.03115591 0.997318 5.9596e-05 weaklyHypometh 1 1.4899e-02 weaklyHypometh 0.8245490 6.7598e-02 insignificant 1 1.0000e+00 insignificant -3.1719e-03 0.9143961 insignificant 1 insignificant 0.6836933 0.0356985 0.65059830 17 0.744612 0.043087 0.70152569 9.0819e-183 1.0000e+00 hypermethylated 4.5410e-180 1.0000e+00 hypermethylated 1.3492e-47 1.0000e+00 hypermethylated 4.4975e-45 1.0000e+00 hypermethylated 0.69439775 8.6338e-15 hypermethylated 4.3169e-12 hypermethylated 0.683405 0.7399728 0.0043124 17 0.743380 0.725677 0.01770270 3.5004e-02 2.7054e-02 weaklyHypermeth 5.3852e-01 5.3047e-01 insignificant 2.4592e-01 1.3153e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0139619 6.8448e-01 insignificant 1.0000000 insignificant 0.768260 0.0356985 0.7314776 19 0.809014 0.043087 7.6593e-01 5.3764e-160 1.0000e+00 hypermethylated 5.3764e-157 1.0000e+00 hypermethylated 1.9547e-38 1.0000e+00 hypermethylated 6.5156e-36 1.0000e+00 hypermethylated 0.6975696 1.6964e-13 hypermethylated 1.6964e-10 hypermethylated 0.7657941 0.7399728 0.08335186 15 0.802922 0.725677 0.07724535 7.3653e-06 5.5521e-01 weaklyHypermeth 2.6305e-04 1.0000e+00 weaklyHypermeth 1.6080e-01 0.43975176 insignificant 1.0000e+00 1.00000 insignificant -1.0790e-02 7.6128e-01 insignificant 1.000000 insignificant 0.0353626 0.739973 -0.65373903 12 0.042501 0.725677 -0.6831761 1.0000e+00 1.6286e-110 hypomethylated 1.0000e+00 1.6286e-107 hypomethylated 1.0000e+00 3.1897e-26 hypomethylated 1.0000e+00 1.0632e-23 hypomethylated -0.7083596 5.4343e-08 hypomethylated 2.7172e-05 hypomethylated chr16 2029350 2030350 48086 SLC9A3R2 ENSG00000065054 0.8936770 242 9 0.712795 180 9 0.7065506 271 8 0.8910841 315 8 0.796784 88 8 0.797033 325 9 0.7483467 112 8 0.852252 294 12 0.8270431 184 8 0.8807089 218 8 0.817525 394 12 0.731250 95 6 0.8744852 287 11 0.8656567 109 3 0.741266 191 8 0.7111111 40 4 0.7796296 47 4 0.7019587 652 8 0.918027 370 11 0.859582 274 9 0.694894 156 9 0.7026712 212 9 0.829166 158 6 0.586630 103 7 0.8141417 353 8 0.8980696 323 12 0.797962 260 9 0.479787 102 6 0.7072327 304 11 0.739609 283 9 0.7901569 292 11 0.772026 385 9 0.1267957 381 12 0.2859069 286 11 0.155139 644 10 0.1461599 160 8 0.197889 231 14 0.1311940 445 11 0.6200764 129 5 0.6642147 294 9 0.6703023 197 8 0.4845888 294 8 0.629913 187 9 0.8448839 0.6629418 0.689052 0.8264555 0.8052500 0.7602268 0.7023003 0.8724560 0.8281602 0.8863846 0.790533 0.7143087 0.7997686 0.816567 0.7690182 0.5860765 0.7489996 0.57874835 0.8821775 0.8367080 0.8064993 0.6365193 0.816803 0.793355 0.7777697 0.7768618 0.824366 0.744768 0.7504330 0.6809044 0.8164637 0.820482 0.07936712 0.1506101 0.09103376 0.09148742 0.1079936 0.1033285 0.6872097 0.6301518 0.696140 0.3984250 0.6023366 3 0.7791764 0.7961066 -0.01089863 11 0.770704 0.746623 0.02408056 0.921125 8.1854e-01 insignificant 1 1.0000e+00 insignificant 0.0943021 9.9999e-01 insignificant 1 1.0000e+00 insignificant 7.0976e-02 0.0686069 insignificant 1 insignificant 0.7791764 0.1724138 0.62284807 11 0.770704 0.165392 0.60531159 5.1108e-81 1.0000e+00 hypermethylated 1.0222e-78 1.0000e+00 hypermethylated 2.2058e-29 1.0000e+00 hypermethylated 4.4115e-27 1.0000e+00 hypermethylated 0.63149085 1.6448e-09 hypermethylated 1.3707e-07 hypermethylated 0.777682 0.6049046 0.1717321 9 0.718832 0.590818 0.12801475 1.4921e-08 9.9998e-01 weaklyHypermeth 1.3564e-06 1.0000e+00 weaklyHypermeth 8.2707e-08 1.0000e+00 weaklyHypermeth 1.6541e-05 1.0000e+00 weaklyHypermeth 0.1915193 2.1900e-03 weaklyHypermeth 0.0904993 weaklyHypermeth 0.796107 0.1724138 0.6320149 11 0.746623 0.165392 5.8123e-01 1.1312e-65 1.0000e+00 hypermethylated 2.2623e-63 1.0000e+00 hypermethylated 2.7870e-20 1.0000e+00 hypermethylated 5.5741e-18 1.0000e+00 hypermethylated 0.5605148 3.4957e-10 hypermethylated 7.9875e-08 hypermethylated 0.7943115 0.6049046 0.18087969 9 0.714494 0.590818 0.12367680 7.7872e-08 9.9992e-01 weaklyHypermeth 4.8670e-06 1.0000e+00 weaklyHypermeth 3.6202e-04 0.99992919 weaklyHypermeth 1.5740e-02 1.00000 weaklyHypermeth 1.2054e-01 2.5504e-02 weaklyHypermeth 0.622038 insignificant 0.1759304 0.604905 -0.44138194 9 0.189009 0.590818 -0.4018083 1.0000e+00 8.4396e-20 hypomethylated 1.0000e+00 6.0283e-18 hypomethylated 1.0000e+00 4.0243e-10 hypomethylated 1.0000e+00 4.0243e-08 hypomethylated -0.4399716 7.8466e-06 hypomethylated 7.1333e-04 hypomethylated chr16 2029850 2030850 48087 SLC9A3R2 ENSG00000065054 0.9243654 288 8 0.834305 120 5 0.7811111 149 5 0.8945462 172 8 0.813396 65 5 0.771822 279 8 0.9822343 113 5 0.892727 124 8 0.9558036 149 5 0.9373352 138 5 0.918284 296 8 0.876136 94 5 0.9557534 197 8 0.9282407 39 1 0.969450 124 5 0.9714286 32 4 0.8644689 67 5 0.8141470 470 8 0.964205 178 8 0.960477 328 8 0.939841 108 8 0.9434612 125 7 0.958600 199 5 0.862780 83 5 0.8922353 302 8 0.9545210 193 8 0.899920 142 8 0.938784 75 5 0.8862782 140 8 0.745628 160 5 0.8019451 204 8 0.934222 360 8 0.4188782 199 8 0.6271830 236 8 0.795141 432 8 0.5338402 182 8 0.488997 146 8 0.4788806 294 8 0.7654746 132 5 0.9284001 312 8 0.7625896 146 8 0.7472390 295 8 0.798582 133 8 0.9247049 0.9344973 0.881217 0.9294907 0.8696805 0.9136444 0.9644309 0.9698565 0.9187226 0.9413683 0.932481 0.8550937 0.9461213 0.943615 0.9283088 0.9745717 0.8852498 0.89100142 0.9614462 0.9384658 0.9415115 0.9690371 0.927785 0.906192 0.9626047 0.9381014 0.902593 0.924970 0.9537495 0.9281570 0.9058811 0.930836 0.49928724 0.6728996 0.94664214 0.72368358 0.6959009 0.8190135 0.8638371 0.9612189 0.883682 0.8749512 0.8981920 5 0.8895060 0.9008621 -0.01267309 8 0.805239 0.781303 0.02393638 0.774192 2.7549e-01 insignificant 1 1.0000e+00 insignificant 0.3412739 7.2765e-01 insignificant 1 1.0000e+00 insignificant 3.9940e-03 0.8702105 insignificant 1 insignificant 0.8895060 0.5568258 0.22604361 8 0.805239 0.495575 0.30966447 1.2081e-16 1.0000e+00 hypermethylated 3.0978e-15 1.0000e+00 hypermethylated 7.4753e-09 1.0000e+00 hypermethylated 2.9901e-07 1.0000e+00 hypermethylated 0.34335847 1.1382e-03 weaklyHypermeth 2.7314e-02 weaklyHypermeth 0.889441 0.8713163 0.0285864 8 0.783599 0.742795 0.04080446 2.9965e-02 8.5084e-01 weaklyHypermeth 4.9123e-01 1.0000e+00 insignificant 2.0574e-04 9.6556e-01 weaklyHypermeth 1.5204e-02 1.0000e+00 weaklyHypermeth 0.1000548 3.4435e-02 weaklyHypermeth 0.5465864 insignificant 0.900862 0.5568258 0.2519044 8 0.781303 0.495575 2.8573e-01 3.9320e-17 1.0000e+00 hypermethylated 1.3107e-15 1.0000e+00 hypermethylated 6.1855e-08 1.0000e+00 hypermethylated 2.6894e-06 1.0000e+00 hypermethylated 0.3393645 1.0255e-03 weaklyHypermeth 2.4292e-02 weaklyHypermeth 0.9011990 0.8713163 0.04337071 8 0.794040 0.742795 0.05124551 3.2207e-02 9.9193e-01 weaklyHypermeth 4.8799e-01 1.0000e+00 insignificant 8.7755e-03 0.99933465 weaklyHypermeth 2.1939e-01 1.00000 insignificant 9.6061e-02 4.0765e-02 weaklyHypermeth 0.769152 insignificant 0.5575758 0.871316 -0.19221467 8 0.550639 0.742795 -0.1921561 1.0000e+00 1.3258e-05 weaklyHypometh 1.0000e+00 2.5015e-04 weaklyHypometh 1.0000e+00 1.3085e-03 weaklyHypometh 1.0000e+00 2.4231e-02 weaklyHypometh -0.2433037 5.5208e-03 weaklyHypometh 1.1042e-01 insignificant chr16 2114350 2115350 48088 MIR1225 ENSG00000221656 0.4382789 761 23 0.263927 781 26 0.3359863 744 25 0.4438722 531 18 0.318735 380 25 0.597556 768 23 0.3490604 672 26 0.251587 702 23 0.2468542 762 25 0.4194744 651 25 0.495582 996 26 0.323073 499 25 0.1932905 1054 25 0.5598555 109 5 0.376735 634 24 0.3793644 279 21 0.2369292 418 21 0.2664875 694 20 0.241300 795 26 0.311373 814 24 0.412243 357 22 0.1577458 470 18 0.394638 605 25 0.401289 416 25 0.3521664 254 16 0.3798253 943 25 0.360991 621 22 0.193226 306 22 0.3797580 690 24 0.296847 976 26 0.3528491 902 26 0.542868 1119 26 0.0329447 881 25 0.0536622 687 26 0.093316 852 21 0.0638008 276 21 0.123620 374 19 0.0439840 1067 25 0.3476858 745 24 0.3730306 883 25 0.2777211 519 19 0.2863959 798 23 0.444149 564 17 0.4590344 0.2616129 0.340474 0.4061427 0.3078787 0.6163656 0.3369948 0.2894553 0.2567386 0.4293788 0.468024 0.3008883 0.1788167 0.385659 0.3380295 0.3833599 0.1912906 0.26344895 0.2329860 0.3811742 0.4435292 0.1581510 0.408902 0.449364 0.4421625 0.3720451 0.361225 0.235853 0.4141167 0.3000110 0.3372224 0.542749 0.02025323 0.0381102 0.07863609 0.03441504 0.0624254 0.0195379 0.2685212 0.3219855 0.284147 0.2114975 0.3979708 18 0.3330267 0.3850875 -0.04781071 26 0.362856 0.392892 -0.03003597 0.999921 3.1987e-03 weaklyHypometh 1 2.6655e-01 insignificant 0.9568460 8.5368e-02 insignificant 1 1.0000e+00 insignificant 4.2869e-04 0.9911690 insignificant 1 insignificant 0.3330267 0.0476190 0.29236684 26 0.362856 0.067922 0.29493420 7.8169e-59 1.0000e+00 hypermethylated 9.7712e-57 1.0000e+00 hypermethylated 4.3746e-41 1.0000e+00 hypermethylated 1.0937e-38 1.0000e+00 hypermethylated 0.28391145 5.7256e-10 hypermethylated 5.2050e-08 hypermethylated 0.332950 0.1983471 0.0623182 21 0.342691 0.343143 -0.00045165 3.8166e-03 1.1926e-01 weaklyHypermeth 8.4813e-02 1.0000e+00 weaklyHypermeth 7.4530e-04 2.3082e-01 weaklyHypermeth 3.7265e-02 1.0000e+00 weaklyHypermeth 0.0066695 8.6887e-01 insignificant 1.0000000 insignificant 0.385087 0.0476190 0.3413510 26 0.392892 0.067922 3.2497e-01 2.7135e-63 1.0000e+00 hypermethylated 3.8764e-61 1.0000e+00 hypermethylated 2.0171e-34 1.0000e+00 hypermethylated 5.0426e-32 1.0000e+00 hypermethylated 0.2834828 2.8330e-07 hypermethylated 2.0236e-05 hypermethylated 0.3850274 0.1983471 0.10787242 21 0.384653 0.343143 0.04151016 1.5033e-06 5.6680e-01 weaklyHypermeth 6.0133e-05 1.0000e+00 weaklyHypermeth 9.4978e-05 0.25037889 weaklyHypermeth 6.3319e-03 1.00000 weaklyHypermeth 6.2408e-03 8.8493e-01 insignificant 1.000000 insignificant 0.0474232 0.198347 -0.20700245 21 0.060326 0.343143 -0.2828167 1.0000e+00 1.8863e-40 hypomethylated 1.0000e+00 4.7158e-38 hypomethylated 1.0000e+00 6.8822e-20 hypomethylated 1.0000e+00 1.7206e-17 hypomethylated -0.2772420 2.3275e-04 hypomethylated 1.2931e-02 hypomethylated chr16 2151550 2152550 48090 TRAF7 ENSG00000131653 0.8069017 342 6 0.696693 151 4 0.9090260 147 4 0.9188015 296 6 0.964701 104 4 0.943397 330 6 0.8753218 176 4 0.930754 125 4 0.8613492 135 4 0.7465158 164 4 0.900915 210 4 0.929276 89 4 0.8810963 151 4 0.9733333 53 2 0.942618 113 4 0.9750000 61 2 0.7062147 77 2 0.9477407 509 6 0.791223 240 6 0.919648 271 6 0.904696 86 4 0.7154412 52 4 0.915218 158 4 0.914244 73 4 0.9558824 44 4 0.9521344 203 6 0.835868 122 4 0.764093 99 4 0.6912021 145 4 0.919208 223 6 0.8906642 211 6 0.822390 325 6 0.2650602 159 4 0.1008751 149 4 0.464553 205 6 0.8012821 121 4 0.231026 98 4 0.7274078 317 6 0.9023994 189 6 0.8728573 316 6 0.8502841 194 6 0.8264879 545 6 0.925042 180 6 0.8989453 0.8320545 0.894611 0.8786550 0.9470577 0.9394698 0.8751044 0.8982948 0.8468188 0.8986726 0.879910 0.8971470 0.8773034 0.930048 0.9166164 0.9514851 0.7749455 0.94246290 0.8983024 0.8981385 0.9211221 0.7255193 0.950497 0.888038 0.9528247 0.9270522 0.840516 0.921612 0.8440550 0.8806414 0.8873458 0.905296 0.30693919 0.0767203 0.26381338 0.55901350 0.2033223 0.5426164 0.8825102 0.8715800 0.809363 0.9186588 0.9424957 4 0.9070016 0.9011494 -0.00471767 4 0.834588 0.854066 -0.01947792 0.283304 3.2927e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.5572160 4.6883e-01 lowCoverage 1 1.0000e+00 lowCoverage 2.4273e-02 0.4636710 lowCoverage 1 lowCoverage 0.9067094 0.4537655 0.47755292 6 0.751255 0.430875 0.32037968 3.9050e-25 9.0350e-01 hypermethylated 1.7750e-23 1.0000e+00 hypermethylated 1.4150e-08 8.6373e-01 hypermethylated 5.2408e-07 1.0000e+00 hypermethylated 0.44932565 1.1089e-02 lowCoverage 1.4401e-01 lowCoverage 0.907002 0.9094101 0.0082961 6 0.834588 0.801431 0.03315707 1.4266e-01 7.9202e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.3203e-01 8.5875e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0056121 8.3311e-01 lowCoverage 1.0000000 lowCoverage 0.902130 0.4546323 0.5175889 4 0.928457 0.492429 4.3603e-01 2.2441e-15 9.7330e-01 lowCoverage 6.4116e-14 1.0000e+00 lowCoverage 4.6104e-08 9.8580e-01 lowCoverage 2.0956e-06 1.0000e+00 lowCoverage 0.4250528 1.3442e-02 lowCoverage 1.6990e-01 lowCoverage 0.9011494 0.9094101 0.00634186 4 0.854066 0.801431 0.05263499 6.6399e-01 8.8402e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 3.3712e-01 0.98083301 lowCoverage 1.0000e+00 1.00000 lowCoverage -1.8661e-02 5.6348e-01 lowCoverage 1.000000 lowCoverage 0.4546323 0.909346 -0.43495304 6 0.492429 0.773064 -0.2806354 8.8765e-01 8.0467e-07 hypomethylated 1.0000e+00 1.9159e-05 hypomethylated 6.9653e-01 4.2822e-05 hypomethylated 1.0000e+00 1.7843e-03 hypomethylated -0.4437135 1.1769e-02 lowCoverage 1.8909e-01 lowCoverage chr16 2473750 2474750 48095 TBC1D24 ENSG00000162065 0.8869722 191 6 0.864875 182 8 0.7775263 242 8 0.9564736 178 5 0.872078 75 5 0.763302 198 5 0.7948118 86 4 0.892357 177 5 0.9087302 132 5 0.9111850 158 5 0.900930 115 5 0.802440 57 3 0.7787526 199 5 0.8050901 105 5 0.754928 126 5 0.7545455 51 2 0.8473492 114 5 0.8425345 350 5 0.960923 85 3 0.931782 194 7 0.945520 66 5 0.6421476 118 5 0.914028 124 6 0.662558 64 5 0.9477273 98 5 0.8931570 236 8 0.689234 97 5 0.868215 64 5 0.8541353 109 3 0.912660 221 8 0.9141144 241 8 0.888655 262 8 0.5924761 234 8 0.3368659 87 3 0.500000 59 2 0.6780303 52 3 0.451490 111 5 0.6883681 159 8 0.8939021 155 3 0.9121568 181 3 0.6939601 165 3 0.8962988 217 5 0.906129 194 5 0.8606310 0.8445222 0.810584 0.9263761 0.8484143 0.8905326 0.8377596 0.8662001 0.8783598 0.8891721 0.904120 0.7838664 0.8502839 0.864743 0.8495405 0.7498353 0.8952881 0.84475966 0.9452676 0.8981333 0.9660927 0.7276562 0.943723 0.891167 0.9328475 0.8524073 0.760564 0.874542 0.9197995 0.8859109 0.8838783 0.896957 0.33188423 0.2612650 0.35567293 0.67733270 0.3750432 0.3550160 0.9060071 0.8857385 0.790774 0.7785310 0.8363064 3 0.8610282 0.8770588 -0.02036600 6 0.801738 0.756488 0.04525009 0.697644 4.1811e-01 insignificant 1 1.0000e+00 insignificant 0.3612025 6.0893e-01 insignificant 1 1.0000e+00 insignificant 6.0334e-03 0.8680909 insignificant 1 insignificant 0.8610282 0.5441595 0.35485729 6 0.801738 0.498487 0.30325104 8.2340e-18 1.0000e+00 hypermethylated 2.1669e-16 1.0000e+00 hypermethylated 2.8881e-06 1.0000e+00 hypermethylated 7.2203e-05 1.0000e+00 hypermethylated 0.30917420 2.0558e-03 lowCoverage 3.9535e-02 lowCoverage 0.861222 0.8355263 0.0215953 5 0.877173 0.885289 -0.00811617 3.1912e-02 4.9001e-01 weaklyHypermeth 5.1269e-01 1.0000e+00 insignificant 1.3174e-01 4.6440e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0101101 8.2883e-01 lowCoverage 1.0000000 lowCoverage 0.877059 0.5441595 0.3421269 7 0.756488 0.498487 2.5800e-01 1.0252e-11 9.9999e-01 hypermethylated 2.3843e-10 1.0000e+00 hypermethylated 4.0867e-05 9.9498e-01 hypermethylated 8.6951e-04 1.0000e+00 hypermethylated 0.3031408 1.3662e-03 lowCoverage 2.9067e-02 lowCoverage 0.8790560 0.8355263 0.02514466 5 0.903943 0.885289 0.01865455 4.0748e-01 8.4014e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.1335e-01 0.43211257 insignificant 1.0000e+00 1.00000 insignificant -1.6144e-02 7.6687e-01 lowCoverage 1.000000 lowCoverage 0.5457143 0.835526 -0.36922009 5 0.623109 0.885289 -0.2621800 9.9916e-01 1.2598e-05 hypomethylated 1.0000e+00 2.4228e-04 hypomethylated 9.9991e-01 3.2260e-04 hypomethylated 1.0000e+00 8.9612e-03 hypomethylated -0.3192843 1.4717e-03 lowCoverage 4.9056e-02 lowCoverage chr16 3005050 3006050 48100 CLDN9 ENSG00000213937 0.8221790 219 9 0.746498 334 9 0.6502545 148 9 0.7990151 223 9 0.723234 93 8 0.757990 389 9 0.7294192 121 9 0.811250 194 9 0.6940640 86 4 0.9800000 89 2 0.820402 287 9 0.658025 34 4 0.5821757 128 5 0.6832789 96 4 0.790598 82 2 0.9130435 46 2 NA 0 0 0.8785460 316 8 0.808482 371 9 0.659520 178 9 0.769468 105 5 0.6407407 52 9 0.769355 182 8 0.799495 100 4 0.6996455 217 7 0.8492105 290 9 0.772240 135 5 0.696601 65 4 0.8909481 304 9 0.860640 300 8 0.8385344 338 9 0.705477 281 9 0.6975949 244 9 0.7258837 306 9 0.711450 302 5 0.9537037 50 2 0.692461 107 8 0.7204594 400 9 0.8380678 244 9 0.7007968 249 9 0.7119128 150 9 0.8860305 186 9 0.702284 191 9 0.8619910 0.7326971 0.662914 0.8201795 0.7564058 0.8723982 0.7381872 0.8437500 0.7870642 0.9218463 0.851521 0.6396011 0.7228788 0.822780 0.8013830 NA NA 0.84375403 0.7882228 0.8317940 0.7668064 0.5598291 0.717400 0.816757 0.5426308 0.9229785 0.763004 0.754346 0.8357521 0.8643206 0.9243725 0.859080 0.61533583 0.5778329 0.57352459 0.74052240 0.7577164 0.7955350 0.8424160 0.7524129 0.641659 0.7994470 0.7857037 3 0.8089135 0.8293198 -0.02426524 9 0.697205 0.653091 0.04411416 0.972141 2.9563e-01 insignificant 1 1.0000e+00 insignificant 0.8806483 6.1619e-01 insignificant 1 1.0000e+00 insignificant -1.0785e-02 0.7376969 insignificant 1 insignificant 0.8092738 0.7288857 0.10031983 9 0.733061 0.669733 0.06332775 5.2257e-05 8.9724e-01 weaklyHypermeth 4.7017e-04 1.0000e+00 weaklyHypermeth 4.8612e-02 7.3809e-01 weaklyHypermeth 3.4723e-01 1.0000e+00 insignificant 0.01331872 7.8346e-01 insignificant 1.0000e+00 insignificant 0.810890 0.7882353 0.0317415 9 0.808662 0.773903 0.03475913 1.6800e-03 9.0395e-01 weaklyHypermeth 4.3077e-02 1.0000e+00 weaklyHypermeth 3.2141e-04 7.6031e-01 weaklyHypermeth 2.0088e-02 1.0000e+00 weaklyHypermeth -0.0042407 9.2819e-01 insignificant 1.0000000 insignificant 0.830021 0.7288857 0.1109998 9 0.771835 0.669733 1.0210e-01 7.3519e-03 9.8743e-01 weaklyHypermeth 4.7876e-02 1.0000e+00 weaklyHypermeth 1.5118e-01 8.1494e-01 insignificant 8.2165e-01 1.0000e+00 insignificant 0.0241040 6.1957e-01 insignificant 1.0000e+00 insignificant 0.8301567 0.7882353 0.05130338 9 0.832243 0.773903 0.05834026 2.1149e-03 9.5183e-01 weaklyHypermeth 5.2872e-02 1.0000e+00 weaklyHypermeth 7.9290e-03 0.80554828 weaklyHypermeth 2.0331e-01 1.00000 insignificant 6.5446e-03 8.8899e-01 insignificant 1.000000 insignificant 0.7310984 0.788235 -0.06565298 9 0.763007 0.773903 -0.0108954 5.4223e-01 2.8422e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.3017e-01 5.9169e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0175594 7.6421e-01 insignificant 1.0000e+00 insignificant chr16 3090050 3091050 48102 ZSCAN10 ENSG00000130182 0.0263457 338 6 0.142857 267 6 0.0198907 374 6 0.0115770 441 6 0.148810 184 7 0.018376 502 6 0.0165650 321 6 0.039740 263 6 0.0054427 408 6 0.0533814 354 6 0.157596 213 6 0.039770 331 6 0.0030303 274 6 NA 0 0 0.042261 255 6 0.0362319 223 6 0.0050505 299 6 0.0172431 441 6 0.011381 173 6 0.160985 308 6 0.103076 95 6 0.0039683 238 6 0.182507 265 6 0.046773 121 6 0.0244919 196 6 0.0087882 365 6 0.037746 147 6 0.000000 44 3 0.0171809 258 6 0.028832 418 6 0.0119048 300 6 0.018605 420 6 0.1555127 212 6 0.0138889 199 6 0.116667 266 4 0.0294118 97 6 0.000000 65 6 0.1627312 368 6 0.0180629 503 6 0.0069444 343 6 0.0193697 346 6 0.0119818 428 6 0.008772 328 6 0.0279757 0.0000000 0.021407 0.0108571 0.0068737 0.0188178 0.0171601 0.0418283 0.0064773 0.0075921 0.017506 0.0412212 0.0033697 NA 0.0419976 0.0367484 0.0049991 0.01776979 0.0122789 0.0226926 0.0370309 0.0041703 0.048242 0.050774 0.0254843 0.0098412 0.033560 0.000000 0.0173345 0.0305209 0.0125109 0.018354 0.01385287 0.0141718 0.03697137 0.03031029 0.0000000 0.0228146 0.0204998 0.0070859 0.019503 0.0132688 0.0086826 6 0.0162506 0.0209278 -0.00379895 6 0.133957 0.090379 0.04357801 0.800480 3.0765e-01 insignificant 1 1.0000e+00 insignificant 0.6424473 6.2471e-01 insignificant 1 1.0000e+00 insignificant 1.0021e-02 0.6187115 insignificant 1 insignificant 0.0162506 0.0157415 0.00019528 6 0.133957 0.097798 0.03615910 3.4413e-01 4.9349e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.1118e-01 7.5190e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02935789 4.0016e-01 insignificant 1.0000e+00 insignificant 0.016251 0.0133470 0.0014458 6 0.133957 0.012237 0.12171975 9.8709e-02 3.1471e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.6880e-01 4.7132e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0373178 1.0176e-02 weaklyHypermeth 0.2422763 insignificant 0.020928 0.0157415 0.0031592 6 0.090379 0.097798 -7.4189e-03 5.1817e-01 8.2875e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.0564e-01 8.0791e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0393791 2.7810e-01 insignificant 1.0000e+00 insignificant 0.0209278 0.0133470 0.00688338 6 0.090379 0.012237 0.07814174 2.3431e-01 7.9615e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.3330e-01 0.74614570 insignificant 1.0000e+00 1.00000 insignificant 2.7297e-02 1.0184e-01 insignificant 1.000000 insignificant 0.0157415 0.013347 0.00086473 6 0.097798 0.012237 0.0855606 3.7074e-01 4.9631e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.4302e-01 4.4743e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0666757 7.7772e-02 insignificant 6.5800e-01 insignificant chr16 3635550 3636550 48109 DNASE1 ENSG00000213918 0.5109205 227 8 0.442337 148 7 0.3178471 147 8 0.4587096 263 7 0.483844 56 5 0.448893 249 8 0.5857100 90 5 0.315535 161 8 0.3073864 101 5 0.5122687 89 6 0.587175 223 8 0.195437 44 5 0.1883730 211 8 NA 0 0 0.407129 139 6 0.1666667 45 5 0.2604942 121 5 0.3237241 289 7 0.239168 136 8 0.405796 278 8 0.503704 79 7 0.1933786 203 8 0.489591 143 8 0.406777 77 7 0.4020186 114 8 0.2963259 334 8 0.393538 130 8 0.476190 35 3 0.4437176 143 8 0.282724 293 8 0.2894589 280 8 0.602445 226 8 0.4066203 140 8 0.4268540 132 8 0.800000 89 3 0.0985221 89 5 0.471561 34 2 0.3607031 252 8 0.2121791 427 7 0.2782879 319 8 0.1973053 267 8 0.1333561 296 8 0.241030 373 8 0.4126350 0.3172838 0.378010 0.2728578 0.3330505 0.3383103 0.4162931 0.2519247 0.2788422 0.3527587 0.497723 0.2751441 0.1106769 NA 0.2415360 0.2350673 0.2286432 0.23903753 0.1498894 0.2186170 0.4575214 0.0662511 0.373699 0.178844 0.2692707 0.2233200 0.273839 0.244074 0.3599701 0.2100289 0.1588658 0.514518 0.34950533 0.4389048 0.57786594 0.15215026 0.3944587 0.3287210 0.0832423 0.1500482 0.090221 0.0951413 0.1394357 5 0.3264833 0.3070175 0.02338488 8 0.382572 0.371760 0.01081160 0.325074 8.7021e-01 insignificant 1 1.0000e+00 insignificant 0.5391436 8.1700e-01 insignificant 1 1.0000e+00 insignificant -2.1617e-02 0.6354276 insignificant 1 insignificant 0.3264833 0.3877551 -0.01841756 8 0.382572 0.391206 -0.00863450 3.6834e-02 5.2799e-04 weaklyHypometh 2.0019e-01 4.3999e-02 weaklyHypometh 6.8243e-02 8.0009e-02 insignificant 4.3745e-01 1.0000e+00 insignificant -0.05067082 6.1919e-01 insignificant 1.0000e+00 insignificant 0.326483 0.1105826 0.1794868 8 0.382572 0.211574 0.17099738 7.3513e-09 1.0000e+00 weaklyHypermeth 8.1681e-07 1.0000e+00 weaklyHypermeth 2.0046e-09 1.0000e+00 weaklyHypermeth 2.0046e-06 1.0000e+00 weaklyHypermeth 0.1642743 5.4126e-04 weaklyHypermeth 0.0527087 weaklyHypermeth 0.307244 0.3885870 -0.0292097 8 0.374898 0.458850 -8.3952e-02 7.5512e-03 2.3223e-03 weaklyHypometh 4.8717e-02 2.3223e-01 weaklyHypometh 4.3667e-02 1.7151e-01 inconclusive 3.0536e-01 1.0000e+00 insignificant -0.0290543 7.7599e-01 insignificant 1.0000e+00 insignificant 0.3070175 0.1105826 0.15236820 8 0.371760 0.211574 0.16018578 1.0876e-06 1.0000e+00 weaklyHypermeth 4.5317e-05 1.0000e+00 weaklyHypermeth 8.0633e-08 0.99999999 weaklyHypermeth 2.6878e-05 1.00000 weaklyHypermeth 1.8589e-01 4.4100e-04 weaklyHypermeth 0.073500 weaklyHypermeth 0.3877551 0.110583 0.18724985 8 0.391206 0.211574 0.1796319 9.1206e-08 9.4371e-01 weaklyHypermeth 1.5201e-05 1.0000e+00 weaklyHypermeth 1.1691e-04 9.8958e-01 weaklyHypermeth 2.4795e-02 1.0000e+00 weaklyHypermeth 0.2149451 6.7002e-02 insignificant 5.8774e-01 insignificant chr16 3635650 3636650 48110 DNASE1 ENSG00000213918 0.5511330 121 5 0.514405 58 4 0.2434343 52 5 0.5942529 74 4 0.638393 19 2 0.536235 120 5 0.6844444 22 2 0.345295 77 5 0.3045455 37 2 0.5958204 49 3 0.591990 151 5 0.157143 17 2 0.2426667 129 5 NA 0 0 0.506579 52 3 0.0000000 18 2 0.2704762 37 2 0.4075630 113 4 0.314097 92 5 0.546027 124 5 0.619091 44 4 0.2953664 113 5 0.556073 77 5 0.610440 46 4 0.4860870 68 5 0.3418137 139 5 0.468146 88 5 0.528571 18 2 0.4914238 68 5 0.390965 124 5 0.3909676 137 5 0.670461 97 5 0.4576988 56 5 0.3759921 57 5 0.666667 84 3 0.0307692 35 2 0.382143 23 2 0.3943765 142 5 0.3250000 132 4 0.3860718 144 5 0.2867857 96 5 0.1550000 99 5 0.317974 115 5 0.3646720 0.3097078 0.280045 0.3343036 0.4178438 0.3919825 0.4088384 0.2304335 0.2277893 0.3216824 0.372807 0.2995130 0.1303030 NA 0.2417763 0.0843183 0.2053030 0.32348167 0.2045087 0.2900124 0.4241219 0.1319901 0.365893 0.349900 0.2805707 0.2276264 0.280969 0.289773 0.3534699 0.2306862 0.2180631 0.553533 0.39248434 0.3273471 0.37661592 0.06118881 0.3177760 0.3657541 0.1739042 0.2289005 0.154728 0.0918561 0.1803142 2 0.3817915 0.3709519 0.00782127 5 0.442338 0.447121 -0.00478237 0.469098 6.5992e-01 insignificant 1 1.0000e+00 insignificant 0.8492505 5.3861e-01 insignificant 1 1.0000e+00 insignificant -6.4056e-02 0.2502028 lowCoverage 1 lowCoverage 0.3817915 0.4181360 0.03491448 5 0.442338 0.413916 0.02842221 2.4917e-02 3.2649e-02 weaklyHypermeth 1.4238e-01 1.0000e+00 insignificant 6.0326e-02 3.6797e-01 insignificant 3.9428e-01 1.0000e+00 insignificant 0.03878708 6.9129e-01 lowCoverage 1.0000e+00 lowCoverage 0.381791 0.1808874 0.1449721 5 0.442338 0.294135 0.14820341 3.1979e-04 9.9994e-01 weaklyHypermeth 1.0660e-02 1.0000e+00 weaklyHypermeth 3.6198e-04 9.9875e-01 weaklyHypermeth 2.0110e-02 1.0000e+00 weaklyHypermeth 0.1292285 4.0279e-02 lowCoverage 0.6011857 lowCoverage 0.370952 0.4181360 0.0428595 5 0.447121 0.413916 3.3205e-02 6.2307e-04 3.5300e-02 weaklyHypermeth 5.3713e-03 1.0000e+00 weaklyHypermeth 4.6056e-03 5.5172e-01 weaklyHypermeth 4.5600e-02 1.0000e+00 weaklyHypermeth 0.1028428 2.9367e-01 lowCoverage 1.0000e+00 lowCoverage 0.3709519 0.1808874 0.13265578 5 0.447121 0.294135 0.15298578 1.5010e-04 9.9998e-01 weaklyHypermeth 4.4147e-03 1.0000e+00 weaklyHypermeth 2.9483e-05 0.99997601 weaklyHypermeth 2.4569e-03 1.00000 weaklyHypermeth 1.9328e-01 3.3574e-03 lowCoverage 0.239814 lowCoverage 0.4181360 0.180887 0.10344347 5 0.413916 0.294135 0.1197812 5.2554e-04 6.4050e-01 weaklyHypermeth 4.3795e-02 1.0000e+00 weaklyHypermeth 3.7516e-02 8.3447e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.0904414 3.5901e-01 lowCoverage 1.0000e+00 lowCoverage chr16 3837850 3838850 48117 TRAP1 ENSG00000126602 0.8271429 90 5 0.716652 132 5 0.7035714 37 5 0.8833333 80 5 0.680952 32 5 0.849857 190 5 0.7904762 33 5 0.831944 98 5 0.6556122 44 5 0.8472222 37 3 0.848333 232 5 0.633333 16 0 0.9463305 78 5 0.8414141 56 5 0.966667 51 5 0.8800000 23 3 0.6666667 3 0 0.7716808 109 5 0.633333 68 5 0.588555 117 5 0.822222 37 2 0.9000000 21 2 0.916078 79 5 0.806092 58 5 0.8476190 30 5 0.6818910 104 5 0.834167 56 5 0.888889 12 1 0.7860507 89 5 0.844545 113 5 0.8183333 81 5 0.888988 196 5 0.8398496 81 5 0.7865657 49 5 0.714912 135 5 0.5833333 12 0 0.864244 61 5 0.8158508 105 5 0.8946078 70 5 0.7243038 84 5 0.8462271 72 5 0.9000000 43 3 0.873664 132 5 0.8406971 0.7341181 0.703608 0.8915071 0.6929308 0.8536112 0.7940599 0.8396334 0.9270987 0.8502291 0.853527 0.6357388 0.9505617 0.841508 0.9725086 0.8762887 0.7622281 0.88099338 0.7773196 0.8233937 0.9862543 0.8951890 0.918334 0.820107 0.8566519 0.8253370 0.844845 0.812439 0.7931794 0.8579663 0.8175012 0.889703 0.83621425 0.7874623 0.86869235 0.73444154 0.8491848 0.8219066 0.8965029 0.8737996 0.848982 0.9072165 0.8754444 0 0.8473132 0.8812785 -0.02096298 5 0.705609 0.707806 -0.00219686 0.917913 2.8539e-01 insignificant 1 1.0000e+00 insignificant 0.9487969 5.8660e-01 insignificant 1 1.0000e+00 insignificant -5.8086e-02 0.0689597 lowCoverage 1 lowCoverage 0.8473132 0.8577878 0.00054988 5 0.705609 0.735004 -0.02939465 5.6168e-01 5.2793e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.6387e-01 8.6034e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01069462 8.3270e-01 lowCoverage 1.0000e+00 lowCoverage 0.848684 0.8553616 -0.0316522 5 0.739878 0.726306 0.01357128 8.8897e-01 1.7596e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.5800e-01 1.5926e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0696066 1.1991e-01 lowCoverage 1.0000000 lowCoverage 0.881279 0.8577878 0.0196131 5 0.707806 0.735004 -2.7198e-02 4.0629e-01 8.7592e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.0701e-01 9.2952e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0687804 1.8049e-01 lowCoverage 1.0000e+00 lowCoverage 0.8820160 0.8553616 -0.01269066 5 0.714663 0.726306 -0.01164349 7.9720e-01 5.4868e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.3638e-01 0.59318746 insignificant 1.0000e+00 1.00000 insignificant -1.1521e-02 7.6545e-01 lowCoverage 1.000000 lowCoverage 0.8574661 0.855362 -0.04018691 5 0.690838 0.726306 -0.0354683 9.5974e-01 1.9504e-01 insignificant 1.0000e+00 9.2435e-01 insignificant 9.9116e-01 6.6889e-02 insignificant 1.0000e+00 4.8199e-01 insignificant -0.0803012 1.6702e-01 lowCoverage 1.0000e+00 lowCoverage chr16 4002750 4003750 48124 CREBBP ENSG00000005339 0.7416221 107 5 0.684259 106 5 0.8036918 185 5 0.9351515 108 5 0.724640 92 5 0.929576 171 5 0.7382869 87 6 0.755037 65 5 0.8333333 18 1 0.9333333 29 5 0.883423 309 5 0.909524 30 5 0.7606481 52 6 0.7277778 39 4 0.771212 54 5 0.8333333 23 4 0.5000000 2 0 0.8773810 63 4 0.900000 21 1 0.914675 92 5 0.984615 42 5 1.0000000 3 0 0.787331 123 5 0.939394 52 5 0.9880952 21 1 0.9733333 88 5 0.806044 63 5 0.938095 36 4 0.7393939 40 4 0.915368 114 5 0.9101587 75 5 0.932364 170 5 0.6795343 97 5 0.8635531 62 5 0.798358 174 5 0.2222222 5 0 0.689339 87 5 0.9749164 108 5 0.7825777 245 5 0.9311879 212 5 0.9504762 99 5 0.6078431 28 2 0.952467 178 5 0.8990298 0.8070175 0.829402 0.9369219 0.9056471 0.9292874 0.8604095 0.9235107 0.8157895 0.9263158 0.868939 0.8893066 0.8990741 0.898830 0.9472089 1.0000000 NA 0.90215121 0.8421053 0.8889610 0.9757085 NA 0.805981 0.942584 0.9774436 0.9859649 0.817235 0.950292 0.7592770 0.9143655 0.9183793 0.919302 0.79011868 0.8798117 0.94195847 0.46129466 0.8260017 0.9724227 0.9394572 0.9323171 0.942314 0.8112941 0.9532234 0 0.8784029 0.9032648 -0.01719231 5 0.748773 0.919160 -0.17038684 0.959552 1.5276e-03 weaklyHypometh 1 1.7349e-01 insignificant 0.9349387 5.7517e-02 insignificant 1 1.0000e+00 insignificant -1.0167e-01 0.0068871 lowCoverage 1 lowCoverage 0.8784029 0.8874296 -0.00435349 5 0.748773 0.746552 0.00222089 6.7104e-01 5.0065e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.0532e-01 9.4102e-01 insignificant 6.0881e-01 1.0000e+00 insignificant 0.10319140 3.8462e-01 lowCoverage 1.0000e+00 lowCoverage 0.878403 0.9370079 -0.0484165 5 0.748773 0.781485 -0.03271203 9.9225e-01 2.2414e-02 weaklyHypometh 1.0000e+00 4.6695e-01 insignificant 9.0774e-01 3.9590e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0370652 6.2581e-01 lowCoverage 1.0000000 lowCoverage 0.903265 0.8874296 0.0148783 5 0.919160 0.746552 1.7261e-01 5.3129e-01 7.9963e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.6948e-02 9.8939e-01 weaklyHypermeth 3.1938e-01 1.0000e+00 insignificant 0.2048621 1.1427e-01 lowCoverage 7.5714e-01 lowCoverage 0.9032648 0.9370079 -0.02942583 5 0.919160 0.781485 0.13767481 9.7758e-01 1.7685e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.1181e-01 0.60038010 insignificant 1.0000e+00 1.00000 insignificant 6.4606e-02 4.0723e-01 lowCoverage 1.000000 lowCoverage 0.8874296 0.937008 -0.04152707 5 0.746552 0.781485 -0.0349329 9.5249e-01 2.6449e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6026e-01 1.1798e-01 insignificant 1.0000e+00 7.5625e-01 insignificant -0.1402566 2.9727e-01 lowCoverage 1.0000e+00 lowCoverage chr16 4377450 4378450 48135 VASN ENSG00000168140 0.8004966 342 8 0.841285 207 8 0.7615253 181 8 0.7776663 346 9 0.705331 111 6 0.879064 404 8 0.8823920 165 8 0.883417 165 8 0.7956176 165 8 0.7490217 144 6 0.822539 287 8 0.815030 83 6 0.8442199 125 6 0.7362278 84 6 0.641736 156 6 0.9100877 50 3 0.8730769 33 2 0.6100700 351 8 0.845119 248 8 0.880970 280 8 0.820928 119 8 0.9367133 145 6 0.610584 150 7 0.859398 117 5 0.6777151 302 7 0.7964657 235 8 0.897048 107 9 0.651903 72 6 0.6956452 247 8 0.889479 259 8 0.8051985 297 8 0.943702 295 8 0.5691550 201 8 0.5077417 248 8 0.686578 334 6 0.9722222 89 5 0.491034 154 8 0.6313032 313 8 0.6785897 274 8 0.7298841 244 8 0.7082300 226 8 0.7342167 256 8 0.803233 238 8 0.9047112 0.9017773 0.833857 0.8704160 0.9648261 0.9012618 0.9044706 0.8944808 0.8646307 0.8674598 0.940244 0.8779528 0.9271284 0.882281 0.9366261 0.9096560 0.8657764 0.86377418 0.8987336 0.9204090 0.8747913 0.9008232 0.866734 0.901248 0.9233589 0.8936279 0.957042 0.853631 0.8385372 0.8903779 0.8738017 0.946125 0.74667864 0.5722323 0.78908244 0.87894766 0.8171248 0.8236546 0.8607300 0.8723729 0.886548 0.9208754 0.8887867 6 0.8684345 0.8583654 0.00536101 8 0.743275 0.694572 0.04870379 0.776446 9.3423e-01 insignificant 1 1.0000e+00 insignificant 0.9675636 8.5025e-01 insignificant 1 1.0000e+00 insignificant 4.0130e-03 0.9167706 insignificant 1 insignificant 0.8679582 0.6649215 0.16887200 8 0.654470 0.540392 0.11407762 9.1063e-11 4.7197e-01 weaklyHypermeth 1.5434e-09 1.0000e+00 weaklyHypermeth 9.3006e-03 2.5694e-01 weaklyHypermeth 8.2306e-02 1.0000e+00 weaklyHypermeth 0.15973904 7.9081e-02 insignificant 6.3265e-01 insignificant 0.870266 0.8271405 0.0335273 8 0.763548 0.689859 0.07368905 1.3453e-03 4.7254e-01 weaklyHypermeth 3.5402e-02 1.0000e+00 weaklyHypermeth 1.3349e-01 5.6585e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0719139 2.3993e-02 weaklyHypermeth 0.4245967 insignificant 0.857021 0.6649175 0.1692331 8 0.639007 0.480869 1.5814e-01 1.2377e-06 7.6939e-01 weaklyHypermeth 1.4912e-05 1.0000e+00 weaklyHypermeth 1.5208e-02 9.4137e-01 weaklyHypermeth 1.2569e-01 1.0000e+00 insignificant 0.1557260 9.0368e-02 insignificant 6.5484e-01 insignificant 0.8606452 0.8278092 0.03099656 8 0.775403 0.752574 0.02282903 1.2287e-01 6.0366e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.3800e-01 0.74889829 insignificant 1.0000e+00 1.00000 insignificant 6.7901e-02 1.0192e-01 insignificant 1.000000 insignificant 0.6681750 0.827001 -0.14220091 8 0.608984 0.661665 -0.0526804 6.8928e-01 2.6962e-03 weaklyHypometh 1.0000e+00 2.5198e-02 weaklyHypometh 9.1157e-01 5.3835e-02 insignificant 1.0000e+00 4.2390e-01 insignificant -0.0878251 2.8910e-01 insignificant 1.0000e+00 insignificant chr16 4871450 4872450 48140 UBN1 ENSG00000118900 0.6900000 32 5 0.874762 70 5 0.8297192 84 5 0.8833333 16 1 0.615072 56 4 0.933333 44 4 0.8212246 54 4 0.903167 62 5 0.8805556 66 5 0.8055556 62 5 0.814124 109 5 0.792778 48 5 0.9095960 82 5 NA 0 0 0.818687 41 4 0.8836364 29 3 0.6333333 29 4 0.7708333 13 0 0.888694 97 5 0.838095 38 5 0.863203 56 4 0.9375000 7 0 0.942857 61 5 0.660985 27 2 1.0000000 1 0 0.7964553 73 5 0.816667 27 3 0.773810 21 3 0.8000000 32 4 0.945138 102 5 0.8341991 75 5 0.861111 49 3 0.6476867 80 5 0.6675758 73 5 0.607005 132 3 0.5000000 11 0 0.904762 58 5 0.4833333 73 5 0.6000000 8 0 0.9636364 43 3 0.7500000 5 0 0.2500000 4 0 0.937500 19 1 0.8176471 0.8950980 0.830439 0.9166074 0.6144501 0.9019608 0.7234667 0.8892734 0.7442810 0.8251634 0.916996 0.7372549 0.8770053 NA 0.7874332 0.7304813 0.6745098 0.78634731 0.9596377 0.9607843 0.7400051 0.9264706 0.915966 0.930036 0.8867938 0.8260774 0.877451 0.750700 0.8725490 0.9066785 0.8602941 0.818301 0.67108909 0.7205882 0.53214351 0.70588235 0.9075630 0.6813725 0.5294118 0.8823529 0.676471 0.2058824 0.7647059 0 0.8236434 0.8662900 -0.04292801 5 0.835633 0.874475 -0.03884165 0.980487 1.7620e-01 insignificant 1 1.0000e+00 insignificant 0.9408423 2.9407e-01 insignificant 1 1.0000e+00 insignificant -3.2318e-02 0.3511901 lowCoverage 1 lowCoverage 0.8236434 0.5152225 0.15546945 5 0.835633 0.619716 0.21591684 2.6975e-13 3.8530e-01 weaklyHypermeth 5.8642e-12 1.0000e+00 weaklyHypermeth 3.3409e-04 3.0927e-01 weaklyHypermeth 4.6401e-03 1.0000e+00 weaklyHypermeth 0.18528171 2.9294e-02 lowCoverage 3.0420e-01 lowCoverage 0.823643 0.8461538 -0.0080429 1 0.835633 0.914431 -0.07879796 7.0625e-01 2.4781e-02 lowCoverage 1.0000e+00 5.0574e-01 lowCoverage 2.7479e-01 1.4657e-02 lowCoverage 1.0000e+00 4.4416e-01 lowCoverage 0.1201148 4.1257e-01 lowCoverage 1.0000000 lowCoverage 0.866290 0.5152225 0.2998831 5 0.874475 0.619716 2.5476e-01 3.8421e-11 7.2592e-01 hypermethylated 8.7320e-10 1.0000e+00 hypermethylated 2.4874e-03 5.7179e-01 weaklyHypermeth 2.6285e-02 1.0000e+00 weaklyHypermeth 0.2176000 1.5005e-02 lowCoverage 1.8051e-01 lowCoverage 0.8662900 0.8461538 0.03079332 1 0.874475 0.914431 -0.03995631 4.2333e-01 1.1605e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 2.6184e-01 0.06187585 lowCoverage 1.0000e+00 1.00000 lowCoverage 1.5243e-01 3.1193e-01 lowCoverage 1.000000 lowCoverage 0.5152225 0.846154 -0.26863631 1 0.619716 0.914431 -0.2947148 7.3278e-01 1.4547e-05 lowCoverage 1.0000e+00 2.6939e-04 lowCoverage 4.9749e-01 6.0202e-03 lowCoverage 1.0000e+00 7.2901e-02 lowCoverage -0.0651669 6.6865e-01 lowCoverage 1.0000e+00 lowCoverage chr16 8867250 8868250 48153 PMM2 ENSG00000140650 0.0705042 947 18 0.107148 996 19 0.1266387 1056 19 0.0500841 975 19 0.025533 769 19 0.115731 1363 19 0.0611897 884 19 0.141650 1081 19 0.0803133 1255 19 0.1139406 1347 19 0.100580 969 19 0.039657 1119 19 0.0331073 968 18 0.1135799 674 16 0.097541 1444 19 0.0317766 1027 18 0.0856557 604 13 0.0818535 1145 18 0.030648 700 18 0.128087 1126 19 0.093209 467 18 0.0577861 644 18 0.087916 716 19 0.095523 531 19 0.1232259 595 19 0.0710009 1106 18 0.083031 1000 20 0.084810 637 21 0.0595511 910 19 0.082502 1239 19 0.0494922 1150 18 0.177643 1017 19 0.0321231 820 17 0.0855045 488 18 0.064434 341 13 0.0351058 198 14 0.077685 807 19 0.1643662 1002 18 0.0785398 1095 19 0.2061936 882 19 0.0783495 760 18 0.0676497 787 17 0.075258 994 19 0.0608373 0.0656227 0.110757 0.0517752 0.0272946 0.0627321 0.0425375 0.0568218 0.0538667 0.0692250 0.086354 0.0368406 0.0308965 0.060316 0.0617234 0.0330894 0.0761114 0.07200332 0.0268705 0.0602272 0.0955274 0.0318042 0.074114 0.086747 0.0804852 0.0656443 0.073175 0.078685 0.0590263 0.0603383 0.0496823 0.081305 0.03127522 0.0689911 0.03177840 0.02181725 0.0460704 0.1272235 0.0475006 0.0634895 0.062760 0.0530853 0.0606400 17 0.0660830 0.0687313 0.00443863 19 0.104835 0.081880 0.02295502 0.515969 5.0455e-01 insignificant 1 1.0000e+00 insignificant 0.9798521 1.2403e-01 insignificant 1 1.0000e+00 insignificant -7.0467e-03 0.5901017 insignificant 1 insignificant 0.0660862 0.0700219 0.01611333 19 0.111502 0.088948 0.02255379 1.9977e-02 3.4317e-13 weaklyHypermeth 1.2107e-01 8.5793e-11 weaklyHypermeth 5.2964e-01 8.8631e-04 inconclusive 1.0000e+00 1.1079e-01 insignificant 0.00522449 8.1398e-01 insignificant 1.0000e+00 insignificant 0.066096 0.0630810 0.0155015 18 0.113951 0.176026 -0.06207525 2.6453e-01 9.8209e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 5.0842e-01 2.2919e-02 inconclusive 1.0000e+00 5.4455e-01 insignificant -0.0194372 5.1381e-01 insignificant 1.0000000 insignificant 0.068745 0.0700410 0.0116157 19 0.085292 0.092654 -7.3624e-03 2.7795e-02 1.0398e-10 weaklyHypermeth 1.6066e-01 2.5995e-08 weaklyHypermeth 1.6002e-01 1.3405e-02 inconclusive 8.5115e-01 1.0000e+00 insignificant 0.0122712 5.9357e-01 insignificant 1.0000e+00 insignificant 0.0684616 0.0630810 0.01049325 18 0.078770 0.176026 -0.09725653 1.8939e-01 4.9499e-02 inconclusive 1.0000e+00 1.0000e+00 insignificant 2.3421e-01 0.24587678 insignificant 1.0000e+00 1.00000 insignificant -1.2391e-02 6.7729e-01 insignificant 1.000000 insignificant 0.0698954 0.062874 -0.00234633 18 0.096532 0.138573 -0.0420413 6.5694e-04 5.5965e-01 inconclusive 4.5759e-02 1.0000e+00 inconclusive 7.2906e-02 7.7800e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0246617 4.7520e-01 insignificant 1.0000e+00 insignificant chr16 10560050 10561050 48176 ENSG00000186261 0.9447778 113 5 0.833621 230 4 0.8222028 83 4 0.7347701 93 5 0.829545 77 4 0.786606 256 4 0.7807540 121 4 0.895036 133 4 0.8453557 67 4 0.8993056 62 4 0.885987 149 4 0.712197 42 4 0.5935737 148 4 0.9722222 35 3 0.895725 96 4 0.8116883 47 4 0.6041667 11 1 0.7990714 88 3 0.960719 225 4 0.754622 234 4 0.859729 72 4 0.8333333 8 0 0.899405 120 4 0.612179 48 4 0.7083333 10 1 0.9394269 245 5 0.845547 93 4 0.936364 39 3 0.8745696 239 4 0.756217 284 5 0.8810858 249 5 0.912500 258 5 0.0027473 181 4 0.0000000 148 4 0.002193 132 3 0.7400000 51 4 0.174242 157 3 0.5438864 248 5 0.6769134 142 5 0.7116467 152 5 0.8349965 53 4 0.7880087 78 5 0.819476 121 5 0.9277389 0.8203562 0.844986 0.8082845 0.8540909 0.8930880 0.7852778 0.9298445 0.8191502 0.9018056 0.904778 0.7497911 0.9084916 0.962316 0.9020029 0.8101299 0.7328041 0.87398484 0.9467604 0.9505290 0.8445249 0.9533333 0.921577 0.898654 0.9398076 0.9463562 0.824478 0.901364 0.8787520 0.8883925 0.8908936 0.915801 0.00340659 0.0000000 0.01655776 0.87566667 0.0140909 0.6880390 0.8593431 0.8376629 0.762458 0.8435952 0.8809155 3 0.8774361 0.8929645 -0.01424702 4 0.704335 0.560907 0.14342795 0.328168 5.6798e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.3037876 4.0400e-01 lowCoverage 1 1.0000e+00 lowCoverage -2.0127e-02 0.5896084 lowCoverage 1 lowCoverage 0.8774361 0.2028353 0.63819311 4 0.704335 0.325610 0.37872533 4.1692e-27 9.9941e-01 lowCoverage 2.3162e-25 1.0000e+00 lowCoverage 7.8057e-07 9.9998e-01 lowCoverage 2.3654e-05 1.0000e+00 lowCoverage 0.57425244 6.6641e-03 lowCoverage 9.5202e-02 lowCoverage 0.877436 0.8547794 0.0340624 4 0.704335 0.635650 0.06868524 1.7281e-03 9.9894e-01 lowCoverage 4.3203e-02 1.0000e+00 lowCoverage 8.5421e-03 9.9920e-01 lowCoverage 2.1903e-01 1.0000e+00 lowCoverage 0.0518890 2.1109e-01 lowCoverage 1.0000000 lowCoverage 0.892965 0.2028353 0.6595177 4 0.560907 0.325610 2.3530e-01 1.6569e-19 9.9811e-01 lowCoverage 6.3727e-18 1.0000e+00 lowCoverage 4.1479e-06 9.9924e-01 lowCoverage 1.1210e-04 1.0000e+00 lowCoverage 0.5943792 5.5318e-03 lowCoverage 8.3815e-02 lowCoverage 0.8936298 0.8547794 0.04330450 4 0.685907 0.635650 0.05025729 2.9101e-02 9.9994e-01 lowCoverage 4.5471e-01 1.0000e+00 lowCoverage 1.1564e-01 0.99988267 lowCoverage 1.0000e+00 1.00000 lowCoverage 7.2016e-02 1.1471e-01 lowCoverage 1.000000 lowCoverage 0.2030568 0.854512 -0.59446905 5 0.372125 0.583600 -0.2114744 9.9932e-01 5.5936e-09 hypomethylated 1.0000e+00 1.9977e-07 hypomethylated 9.9909e-01 7.2591e-04 hypomethylated 1.0000e+00 1.6498e-02 hypomethylated -0.5223635 9.5906e-03 lowCoverage 1.6535e-01 lowCoverage chr16 11107650 11108650 48198 CLEC16A ENSG00000038532 0.8767645 240 5 0.858239 206 6 0.8999178 165 6 0.9253342 241 4 0.927584 94 6 0.800884 304 6 0.8765542 147 6 0.857380 198 6 0.8448016 140 6 0.9144014 145 6 0.864731 174 6 0.902688 80 6 0.9289265 191 6 0.9354839 31 1 0.905884 181 6 0.9183949 74 5 0.8949675 98 6 0.8635530 235 5 0.874642 96 5 0.945659 271 5 0.787202 87 5 0.7077778 102 4 0.910313 191 5 0.946568 103 5 0.9518395 67 4 0.8905327 220 6 0.693567 96 6 0.866138 90 6 0.7612510 125 5 0.910606 284 6 0.8662336 221 6 0.869228 308 6 0.9675801 170 6 0.9707071 72 5 0.996610 96 5 0.8920455 20 1 0.911682 119 5 0.9335054 197 5 0.8633523 218 5 0.9274960 178 5 0.8583581 176 4 0.9017365 228 5 0.975154 222 4 0.8414346 0.8457599 0.882377 0.9155828 0.9571377 0.8992962 0.8427537 0.8518498 0.8714953 0.9163754 0.855072 0.8917269 0.9001791 NA 0.8897970 0.8869173 0.8818919 0.87302047 0.8544223 0.9262377 0.7972433 0.8755319 0.914207 0.950691 0.9524182 0.9048105 0.746783 0.849994 0.8010468 0.9095128 0.9221772 0.904026 0.95059834 0.9839351 0.97455790 0.90362439 0.9254872 0.9303997 0.9432846 0.9076826 0.922024 0.9043421 0.9663810 4 0.8828149 0.8833157 -0.00047349 5 0.887228 0.852928 0.03430007 0.026005 4.2586e-01 inconclusive 1 1.0000e+00 insignificant 0.0649470 6.9061e-01 insignificant 1 1.0000e+00 insignificant 4.4068e-02 0.1233826 insignificant 1 insignificant 0.8828149 0.9421365 -0.06045808 5 0.887228 0.947078 -0.05985028 9.9996e-01 3.0243e-05 weaklyHypometh 1.0000e+00 5.0404e-03 weaklyHypometh 9.9932e-01 2.0023e-04 weaklyHypometh 1.0000e+00 3.3372e-02 weaklyHypometh -0.05451550 1.7653e-02 lowCoverage 2.0037e-01 lowCoverage 0.882815 0.9266145 -0.0461983 5 0.887228 0.884217 0.00301065 5.5557e-01 1.4624e-02 weaklyHypometh 1.0000e+00 3.7279e-01 insignificant 9.7870e-01 2.4706e-02 weaklyHypometh 1.0000e+00 5.4594e-01 insignificant -0.0143799 5.6000e-01 lowCoverage 1.0000000 lowCoverage 0.883316 0.9421365 -0.0588061 5 0.852928 0.947078 -9.4150e-02 9.9982e-01 1.4217e-05 weaklyHypometh 1.0000e+00 2.3695e-03 weaklyHypometh 9.9978e-01 6.8558e-05 weaklyHypometh 1.0000e+00 1.7139e-02 weaklyHypometh -0.0985836 4.9175e-03 lowCoverage 7.5654e-02 lowCoverage 0.8833157 0.9266145 -0.04004478 5 0.852928 0.884217 -0.03128942 9.6414e-01 2.9868e-02 weaklyHypometh 1.0000e+00 8.7848e-01 insignificant 9.8540e-01 0.04603297 weaklyHypometh 1.0000e+00 1.00000 insignificant -5.8448e-02 1.0333e-01 lowCoverage 1.000000 lowCoverage 0.9421365 0.926614 0.01825857 5 0.947078 0.884217 0.0628609 5.9128e-03 7.8629e-01 weaklyHypermeth 3.2849e-01 1.0000e+00 insignificant 1.9683e-02 9.4147e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.0401356 1.7673e-01 lowCoverage 1.0000e+00 lowCoverage chr16 11153050 11154050 48204 CLEC16A ENSG00000038532 0.8507481 381 5 0.458984 307 5 0.8028265 109 5 0.7780481 287 5 0.782895 56 3 0.801933 415 6 0.6784946 75 4 0.757130 197 6 0.6496891 118 4 0.8088462 67 3 0.829536 333 6 0.465357 48 4 0.6619372 162 4 0.9026377 67 4 0.767230 96 3 0.4302413 79 5 0.6291667 21 1 0.7700355 324 5 0.775813 233 4 0.823532 282 6 0.830556 60 6 0.7748029 76 4 0.873014 169 5 0.818768 152 6 0.6565241 57 4 0.8247998 259 6 0.666923 99 6 0.784531 49 3 0.7612469 237 4 0.878821 327 6 0.8944613 276 6 0.772507 364 6 0.8289801 204 6 0.8079798 95 5 0.863925 289 5 0.6666667 10 0 0.913442 128 6 0.8229370 266 6 0.5784393 237 5 0.6602831 302 5 0.5927128 343 5 0.7333694 208 4 0.659968 257 5 0.8681773 0.6876748 0.824700 0.8115204 0.8757235 0.8537839 0.8333389 0.8478553 0.7320019 0.8047284 0.841831 0.7174245 0.7364916 0.887510 0.7296657 0.7008093 0.6125461 0.74928041 0.8256904 0.7920470 0.9588488 0.6793122 0.882476 0.716352 0.8196042 0.8389430 0.774400 0.854100 0.8459132 0.8763246 0.9040201 0.826742 0.75190937 0.7449203 0.90387125 0.81790866 0.8572119 0.7353623 0.5647449 0.7188947 0.689489 0.7574484 0.6625719 2 0.7847963 0.8209237 -0.03713282 6 0.753790 0.813740 -0.05994998 0.998021 1.8847e-02 weaklyHypometh 1 7.2488e-01 insignificant 0.9993196 2.2619e-02 weaklyHypometh 1 8.9713e-01 insignificant -7.3492e-02 0.0581995 lowCoverage 1 lowCoverage 0.7847963 0.8114919 -0.03008360 6 0.753790 0.839160 -0.08537034 4.1368e-01 2.1461e-04 weaklyHypometh 1.0000e+00 2.1461e-02 weaklyHypometh 4.4591e-01 8.8650e-05 weaklyHypometh 1.0000e+00 1.7730e-02 weaklyHypometh -0.09606780 5.2778e-02 lowCoverage 4.5894e-01 lowCoverage 0.784796 0.6525612 0.1295375 5 0.753790 0.601731 0.15205875 8.1694e-07 9.9124e-01 weaklyHypermeth 5.8353e-05 1.0000e+00 weaklyHypermeth 3.0206e-04 9.9772e-01 weaklyHypermeth 2.0088e-02 1.0000e+00 weaklyHypermeth 0.0762995 8.3025e-02 lowCoverage 0.9224952 lowCoverage 0.820924 0.8114919 0.0105860 6 0.813740 0.839160 -2.5420e-02 2.5821e-01 9.7195e-03 inconclusive 1.0000e+00 7.4765e-01 insignificant 1.6921e-01 5.1574e-03 inconclusive 8.8593e-01 6.4467e-01 insignificant -0.0225757 5.8878e-01 lowCoverage 1.0000e+00 lowCoverage 0.8209237 0.6525612 0.16191162 5 0.813740 0.601731 0.21200873 2.6820e-10 9.9999e-01 weaklyHypermeth 5.3640e-08 1.0000e+00 weaklyHypermeth 3.5511e-06 0.99999779 weaklyHypermeth 5.9185e-04 1.00000 weaklyHypermeth 1.4979e-01 2.0743e-03 lowCoverage 0.177835 lowCoverage 0.8114919 0.652561 0.14572872 5 0.839160 0.601731 0.2374291 5.8880e-11 9.6250e-01 weaklyHypermeth 1.9627e-08 1.0000e+00 weaklyHypermeth 1.2398e-04 9.2081e-01 weaklyHypermeth 2.4795e-02 1.0000e+00 weaklyHypermeth 0.1723673 3.4703e-03 lowCoverage 8.6758e-02 lowCoverage chr16 11166350 11167350 48209 CLEC16A ENSG00000038532 0.9151753 193 5 0.908687 358 5 0.8695123 246 5 0.8464709 140 4 0.951323 162 5 0.934720 281 5 0.8907269 244 5 0.891479 220 5 0.9294444 169 5 0.9387380 189 5 0.886047 312 5 0.873631 125 5 0.9590576 222 5 0.8669109 99 3 0.932834 254 5 0.9289130 115 5 0.7678788 86 3 0.9403595 157 3 0.943757 326 5 0.894001 223 5 0.813373 116 5 0.9629859 78 3 0.931354 152 5 0.954012 137 5 0.7371429 30 2 0.9500369 403 5 0.858678 162 5 0.982489 171 5 0.9361228 338 5 0.951906 458 5 0.9221027 352 5 0.937029 250 5 0.9852148 253 5 0.9790836 132 5 0.961224 300 4 1.0000000 12 1 0.970829 219 5 0.9180557 306 5 0.9753103 225 5 0.9466275 164 5 0.9873375 143 3 0.9714286 136 5 0.986443 146 4 0.8880637 0.8881599 0.893401 0.9072473 0.9643494 0.9309422 0.9145644 0.8937176 0.9144314 0.9488573 0.901165 0.9334562 0.9450598 0.873348 0.9481608 0.9430197 0.9562799 0.90016510 0.9405993 0.9021593 0.8225374 0.9382179 0.934652 0.958242 0.8328125 0.9430407 0.890998 0.984657 0.9529654 0.9242917 0.9534824 0.907508 0.97227772 0.9631374 0.90104167 0.99861134 0.9542952 0.8857502 0.9719789 0.9399346 0.977009 0.9962798 0.9866469 3 0.9119146 0.9316207 -0.01945735 5 0.759490 0.943449 -0.18395888 0.995336 4.4897e-02 weaklyHypometh 1 1.0000e+00 insignificant 0.9603454 1.7258e-01 insignificant 1 1.0000e+00 insignificant -7.9528e-03 0.7353903 lowCoverage 1 lowCoverage 0.9123574 0.9435352 -0.03123907 5 0.911388 0.960301 -0.04891305 9.9056e-01 1.0186e-04 weaklyHypometh 1.0000e+00 1.1318e-02 weaklyHypometh 1.0000e+00 1.7849e-06 weaklyHypometh 1.0000e+00 4.4623e-04 weaklyHypometh -0.06558469 8.2032e-04 lowCoverage 2.1378e-02 lowCoverage 0.911915 0.9705160 -0.0565688 5 0.759490 0.970204 -0.21071366 1.0000e+00 2.7221e-05 weaklyHypometh 1.0000e+00 6.8053e-03 weaklyHypometh 1.0000e+00 6.8880e-05 weaklyHypometh 1.0000e+00 1.3776e-02 weaklyHypometh -0.0699462 2.1425e-05 lowCoverage 0.0053562 lowCoverage 0.931569 0.9435352 -0.0121511 5 0.932139 0.960301 -2.8162e-02 9.4027e-01 9.1956e-03 weaklyHypometh 1.0000e+00 7.4765e-01 insignificant 9.9997e-01 1.7751e-04 weaklyHypometh 1.0000e+00 3.5501e-02 weaklyHypometh -0.0576319 2.8048e-02 lowCoverage 2.9524e-01 lowCoverage 0.9316207 0.9705160 -0.03975016 5 0.943449 0.970204 -0.02675478 9.9666e-01 5.0517e-03 weaklyHypometh 1.0000e+00 3.0950e-01 insignificant 1.0000e+00 0.00114999 weaklyHypometh 1.0000e+00 0.36150 insignificant -6.1993e-02 1.4512e-02 lowCoverage 0.453485 lowCoverage 0.9435352 0.970443 -0.03723909 5 0.960301 0.964244 -0.0039433 3.5024e-01 6.0270e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.1174e-01 6.1718e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0043615 7.5789e-01 lowCoverage 1.0000e+00 lowCoverage chr16 11233850 11234850 48214 CLEC16A ENSG00000038532 0.4686765 317 13 0.301115 444 13 0.6886143 460 18 0.4796809 409 14 0.574189 310 18 0.730977 474 13 0.3507069 458 17 0.601716 407 17 0.4092939 350 15 0.5769363 469 18 0.449433 672 17 0.449043 267 17 0.3893679 524 18 0.6173651 283 14 0.782804 450 17 0.3240523 352 13 0.5700000 59 4 0.4527612 543 17 0.648724 775 17 0.623175 417 17 0.389939 304 17 0.4805815 297 14 0.461516 377 17 0.453129 329 18 0.6289944 176 13 0.8329233 530 17 0.533764 404 12 0.363327 171 16 0.5550506 537 16 0.838091 436 17 0.5387782 528 17 0.599204 472 17 0.5134198 489 17 0.6480452 439 18 0.699780 467 14 0.3454365 83 10 0.555500 302 16 0.4136476 930 17 0.5491862 412 17 0.6162098 414 17 0.5263227 395 17 0.5834947 508 17 0.497597 329 13 0.4562650 0.3531408 0.696374 0.4337516 0.5552210 0.6827151 0.3054317 0.6886864 0.3739735 0.5418530 0.507752 0.5059208 0.3057819 0.583971 0.7271434 0.3338744 NA 0.53650076 0.6346289 0.6122751 0.4973114 0.4882563 0.494944 0.462781 0.7565093 0.8687673 0.556300 0.387948 0.5093642 0.8424513 0.5146244 0.611824 0.44606887 0.5766183 0.55352400 0.28354436 0.5972121 0.3816213 0.5743163 0.5328143 0.496503 0.5285737 0.5032741 10 0.5392819 0.5987722 -0.06679008 17 0.496732 0.536959 -0.04022746 0.998813 8.7658e-03 weaklyHypometh 1 4.7110e-01 insignificant 0.9940788 7.5643e-02 insignificant 1 1.0000e+00 insignificant -3.1843e-02 0.5580820 insignificant 1 insignificant 0.5393551 0.4900369 0.05198437 17 0.473856 0.540480 -0.06662441 2.1075e-02 9.2542e-02 weaklyHypermeth 1.2470e-01 1.0000e+00 insignificant 3.0594e-01 9.1900e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00487341 9.4026e-01 insignificant 1.0000e+00 insignificant 0.539419 0.5386485 -0.0145507 17 0.496420 0.542769 -0.04634847 5.7986e-01 3.3857e-02 weaklyHypometh 1.0000e+00 5.8926e-01 insignificant 5.3688e-01 5.9393e-02 insignificant 1.0000e+00 9.8989e-01 insignificant -0.0301305 4.2585e-01 insignificant 1.0000000 insignificant 0.598946 0.4905800 0.1159494 17 0.543653 0.566217 -2.2564e-02 3.0485e-04 3.4609e-02 weaklyHypermeth 2.7219e-03 1.0000e+00 weaklyHypermeth 3.5228e-02 1.9058e-01 weaklyHypermeth 2.5344e-01 1.0000e+00 insignificant 0.0269698 7.0911e-01 insignificant 1.0000e+00 insignificant 0.5989458 0.5386485 0.05528411 17 0.543653 0.542769 0.00088478 4.4824e-02 2.9857e-01 weaklyHypermeth 6.0572e-01 1.0000e+00 insignificant 2.5927e-01 0.46294222 insignificant 1.0000e+00 1.00000 insignificant 1.7127e-03 9.7236e-01 insignificant 1.000000 insignificant 0.4905800 0.538649 -0.07005197 17 0.566217 0.542769 0.0234485 7.8658e-01 9.4775e-02 insignificant 1.0000e+00 5.2074e-01 insignificant 4.9082e-01 2.2685e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0252571 6.8257e-01 insignificant 1.0000e+00 insignificant chr16 11536350 11537350 48223 ENSG00000188897 0.9426768 203 4 0.828308 227 5 0.8585456 152 5 0.9698918 205 4 0.980235 62 5 0.898905 435 5 0.8672910 142 4 0.907507 153 5 0.8816112 149 5 0.9666667 114 4 0.837999 118 5 0.904178 102 4 0.9405193 128 4 0.9385783 134 4 0.913175 182 4 0.8230672 133 5 1.0000000 23 2 0.9279348 278 4 0.744149 192 4 0.942855 268 5 0.978947 50 4 0.9084211 63 5 0.921384 167 4 0.902878 133 5 0.9600000 44 4 0.9439081 245 4 0.879654 61 3 0.900981 122 5 0.8988544 137 4 0.961672 148 5 0.9363537 203 5 0.906868 235 5 0.8473959 169 5 0.7708333 36 4 0.798039 177 4 0.5000000 4 0 0.953414 94 5 0.8685560 180 5 0.7363327 169 4 0.9859259 145 4 0.9444888 177 4 0.9492140 125 4 0.960495 166 4 0.9261828 0.8390211 0.880233 0.9557477 0.9669366 0.9034603 0.8632216 0.9234507 0.8664972 0.9441558 0.830499 0.8800247 0.9293959 0.911444 0.9494022 0.7657781 1.0000000 0.91142481 0.9037888 0.9348693 0.9603554 0.9159205 0.895393 0.935455 0.9454545 0.9317718 0.798111 0.913552 0.9008725 0.9836041 0.9189219 0.938952 0.87505057 0.8148320 0.72358034 0.34910328 0.9401022 0.8241671 0.9022279 0.9810325 0.926122 0.9463977 0.9549333 4 0.9064706 0.9235075 -0.01702216 5 0.904628 0.918509 -0.01388027 0.957145 1.9214e-01 insignificant 1 1.0000e+00 insignificant 0.9721071 1.3200e-01 insignificant 1 1.0000e+00 insignificant -2.1289e-02 0.2115330 lowCoverage 1 lowCoverage 0.9064706 0.8257576 0.08005301 4 0.904628 0.840073 0.06455541 1.7335e-02 3.5423e-01 lowCoverage 1.0570e-01 1.0000e+00 lowCoverage 2.1357e-01 4.8269e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.11399828 1.3436e-01 lowCoverage 9.3302e-01 lowCoverage 0.906471 0.9450128 -0.0346514 4 0.904628 0.928857 -0.02422822 9.7311e-01 4.5911e-02 lowCoverage 1.0000e+00 7.4050e-01 lowCoverage 9.8134e-01 3.7417e-02 lowCoverage 1.0000e+00 7.0597e-01 lowCoverage -0.0115867 8.1720e-01 lowCoverage 1.0000000 lowCoverage 0.923507 0.8257576 0.0971322 4 0.918509 0.840073 7.8436e-02 3.2176e-02 7.5477e-01 lowCoverage 1.8282e-01 1.0000e+00 lowCoverage 1.2490e-01 8.1595e-01 lowCoverage 7.1516e-01 1.0000e+00 lowCoverage 0.1352872 8.6264e-02 lowCoverage 6.3430e-01 lowCoverage 0.9235075 0.9450128 -0.01895604 4 0.918509 0.928857 -0.01034795 9.0542e-01 1.4911e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.3090e-01 0.36448357 lowCoverage 1.0000e+00 1.00000 lowCoverage 9.7022e-03 8.4313e-01 lowCoverage 1.000000 lowCoverage 0.8257576 0.945013 -0.11982732 4 0.840073 0.928857 -0.0887836 8.2927e-01 1.2504e-01 lowCoverage 1.0000e+00 6.4453e-01 lowCoverage 8.0676e-01 1.3744e-01 lowCoverage 1.0000e+00 8.4320e-01 lowCoverage -0.1255849 1.4318e-01 lowCoverage 9.8831e-01 lowCoverage chr16 11652850 11653850 48231 LITAF ENSG00000189067 0.7616838 355 9 0.679447 423 12 0.6974566 202 10 0.7934943 412 12 0.728250 153 9 0.771693 540 12 0.5926148 174 10 0.771310 289 12 0.7722159 236 9 0.7606404 235 7 0.755015 532 12 0.637356 88 6 0.7493647 331 10 0.8099139 182 10 0.797653 260 10 0.8641975 79 4 0.7373557 563 6 0.6931378 358 9 0.792488 193 8 0.810779 391 10 0.658352 138 11 0.8128672 192 11 0.744392 295 9 0.717864 203 10 0.7461863 291 11 0.7496588 436 12 0.676496 248 10 0.657863 131 6 0.8262141 259 10 0.758940 519 12 0.7627691 416 12 0.652689 485 12 0.6629708 390 12 0.6186672 198 11 0.607912 631 12 0.6575758 79 7 0.557026 379 12 0.7401906 397 12 0.7081426 340 11 0.7381854 361 11 0.7148320 351 11 0.6523086 248 8 0.725361 402 12 0.6994126 0.7202224 0.625615 0.7386931 0.6739979 0.7127285 0.6371446 0.7473708 0.7181056 0.7359543 0.685504 0.6859425 0.7186677 0.729450 0.7673319 0.8025050 0.7687619 0.67661289 0.7100885 0.7341982 0.6194849 0.7478258 0.706580 0.693828 0.7389252 0.6932342 0.668362 0.736838 0.7901417 0.7391837 0.7158971 0.696873 0.60629218 0.6198334 0.59092922 0.60926293 0.5554298 0.7023192 0.6869594 0.6945377 0.666978 0.6919602 0.6977230 6 0.7355248 0.7425962 0.01260582 10 0.771261 0.680132 0.09112906 0.375742 9.4338e-01 insignificant 1 1.0000e+00 insignificant 0.1926869 7.7415e-01 insignificant 1 1.0000e+00 insignificant 1.8446e-02 0.4136707 insignificant 1 insignificant 0.7355248 0.6485053 0.10549762 10 0.771261 0.589303 0.18195743 2.2239e-09 9.9988e-01 weaklyHypermeth 3.1322e-08 1.0000e+00 weaklyHypermeth 1.0339e-05 9.9997e-01 weaklyHypermeth 2.2975e-04 1.0000e+00 weaklyHypermeth 0.10807953 5.3417e-03 weaklyHypermeth 8.2180e-02 weaklyHypermeth 0.735348 0.6603995 0.0410602 9 0.752199 0.724532 0.02766766 3.5784e-02 4.4338e-01 weaklyHypermeth 5.4113e-01 1.0000e+00 insignificant 6.7532e-02 5.4975e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0410374 6.7442e-02 insignificant 0.8028764 insignificant 0.742596 0.6485053 0.0977911 12 0.680132 0.589303 9.0828e-02 6.9886e-07 9.9988e-01 weaklyHypermeth 8.7357e-06 1.0000e+00 weaklyHypermeth 3.4159e-04 9.9999e-01 weaklyHypermeth 5.7896e-03 1.0000e+00 weaklyHypermeth 0.0896339 1.5405e-02 weaklyHypermeth 1.8124e-01 insignificant 0.7436253 0.6603995 0.02000432 11 0.736809 0.724532 0.01227784 9.3883e-03 1.8009e-01 weaklyHypermeth 1.8054e-01 1.0000e+00 insignificant 4.7984e-02 0.26589957 weaklyHypermeth 8.2730e-01 1.00000 insignificant 2.2592e-02 3.3397e-01 insignificant 1.000000 insignificant 0.6488181 0.660400 -0.07182577 11 0.638412 0.724532 -0.0861196 7.6545e-01 2.2099e-04 weaklyHypometh 1.0000e+00 2.7974e-03 weaklyHypometh 7.8743e-01 3.1832e-03 weaklyHypometh 1.0000e+00 4.4211e-02 weaklyHypometh -0.0670421 5.2141e-02 insignificant 4.9564e-01 insignificant chr16 12003150 12004150 48237 RUNDC2A ENSG00000140660 0.6683244 162 8 0.609419 145 5 0.3485887 72 4 0.6021572 136 8 0.696604 59 5 0.646556 238 8 0.5885110 80 5 0.639548 146 8 0.5435268 69 3 0.5407407 69 5 0.717204 185 8 0.277778 39 2 0.6751785 119 8 0.5428571 40 4 0.604798 100 8 0.7314286 22 2 0.4176471 29 2 0.6055399 121 8 0.626706 128 8 0.619943 210 7 0.662500 76 8 0.6306818 71 8 0.688904 88 5 0.718750 68 7 0.8000000 62 4 0.6908435 172 8 0.655208 97 8 0.677083 36 2 0.5568020 93 5 0.656979 164 7 0.5763702 178 8 0.615793 267 8 0.5752133 168 8 0.5990497 68 7 0.611699 164 7 0.6153846 35 2 0.669450 94 5 0.5898465 152 7 0.6254221 120 5 0.6314918 158 8 0.6572853 104 5 0.5583333 94 5 0.660398 162 8 0.8539174 0.7449407 0.598939 0.7897515 0.7880360 0.8109783 0.7361209 0.7758070 0.6834851 0.7105643 0.856438 0.6524981 0.8330477 0.741420 0.7489662 0.7598310 0.5535426 0.83467702 0.7464630 0.7589823 0.8909396 0.7515558 0.846703 0.878076 0.7854124 0.7987686 0.820638 0.838367 0.7264479 0.7964977 0.7601403 0.776868 0.61836213 0.7378822 0.74809229 0.75271038 0.7602084 0.7344052 0.7997263 0.8167985 0.806551 0.7721477 0.8276325 2 0.7385892 0.7434402 -0.01759390 5 0.623763 0.642607 -0.01884439 0.945868 2.9373e-01 insignificant 1 1.0000e+00 insignificant 0.9909132 3.1261e-03 weaklyHypometh 1 3.0407e-01 insignificant -7.5674e-02 0.0253921 weaklyHypometh 1 insignificant 0.7385892 0.6563877 0.05999545 5 0.623763 0.599086 0.02467669 1.4989e-02 8.0990e-01 weaklyHypermeth 9.1957e-02 1.0000e+00 weaklyHypermeth 4.0603e-01 3.5611e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02495447 4.0462e-01 insignificant 1.0000e+00 insignificant 0.738589 0.7915361 -0.0385376 5 0.623763 0.649939 -0.02617623 8.9692e-01 2.0172e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.4119e-01 1.0772e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0414334 2.1101e-01 insignificant 1.0000000 insignificant 0.743440 0.6563877 0.0739812 8 0.642607 0.599086 4.3521e-02 8.6180e-04 9.2828e-01 weaklyHypermeth 7.3658e-03 1.0000e+00 weaklyHypermeth 1.6000e-02 9.4182e-01 weaklyHypermeth 1.3008e-01 1.0000e+00 insignificant 0.0507191 4.1327e-02 weaklyHypermeth 3.7570e-01 insignificant 0.7434402 0.7915361 -0.02085557 5 0.642607 0.649939 -0.00733184 6.9509e-01 3.7390e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.8870e-01 0.87053976 insignificant 1.0000e+00 1.00000 insignificant 3.4240e-02 2.1531e-01 insignificant 1.000000 insignificant 0.6563877 0.791536 -0.10030468 5 0.599086 0.649939 -0.0508529 8.7921e-01 6.9064e-03 weaklyHypometh 1.0000e+00 5.9029e-02 weaklyHypometh 6.7395e-01 1.2453e-01 insignificant 1.0000e+00 7.8318e-01 insignificant -0.0164790 4.8957e-01 insignificant 1.0000e+00 insignificant chr16 14013750 14014750 48276 ERCC4 ENSG00000175595 0.6849206 59 5 0.569078 76 5 0.5138889 17 0 0.8685990 59 5 0.567500 72 5 0.612212 94 5 0.3119048 63 5 0.571802 78 5 0.5000000 27 4 0.6733333 28 5 0.726200 133 5 0.700000 9 0 0.7756349 42 5 0.7490842 61 5 0.733796 45 5 0.2916667 19 0 1.0000000 4 0 0.7566138 49 4 0.770833 45 5 0.685714 36 5 0.826667 23 3 0.0000000 1 0 0.500733 40 5 0.747222 28 4 0.7954545 27 1 0.7052171 79 5 0.843615 45 4 0.433333 10 0 0.8361345 47 5 0.598302 81 5 0.7657256 101 5 0.701852 40 5 0.4376114 62 5 0.4700000 29 4 0.449495 65 5 0.6666667 7 0 0.701190 59 5 0.5717172 59 5 0.5634387 68 5 0.6150794 53 5 0.6312253 69 5 0.9259259 16 1 0.637179 61 5 0.6616869 0.6558572 0.651961 0.8372644 0.5612745 0.6094822 0.4627954 0.6727083 0.4967320 0.6366013 0.721644 0.7450980 0.7607376 0.726998 0.6761983 0.3921569 0.8816197 0.82570806 0.7009804 0.6834734 0.7967320 NA 0.472599 0.669935 0.7923351 0.7097902 0.798638 0.490196 0.7668479 0.7108873 0.7217664 0.807190 0.52075076 0.4882353 0.47445039 0.68627451 0.7182540 0.5736780 0.5678912 0.7538515 0.624351 0.8692810 0.6181498 0 0.6617211 0.7337165 -0.07351213 5 0.645426 0.713999 -0.06857289 0.924758 9.6132e-03 weaklyHypometh 1 4.7434e-01 insignificant 0.9370437 7.2277e-02 insignificant 1 1.0000e+00 insignificant 6.9512e-03 0.9314082 lowCoverage 1 lowCoverage 0.6604146 0.5516014 0.10482940 5 0.553222 0.452593 0.10062895 2.9022e-02 9.9989e-01 weaklyHypermeth 1.6304e-01 1.0000e+00 insignificant 1.7343e-01 9.9811e-01 insignificant 9.2741e-01 1.0000e+00 insignificant 0.10369236 1.1061e-01 lowCoverage 8.1934e-01 lowCoverage 0.661721 0.6367041 0.0104225 5 0.645426 0.653394 -0.00796791 5.6493e-01 7.3054e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.3722e-01 6.2166e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0214306 7.8184e-01 lowCoverage 1.0000000 lowCoverage 0.733716 0.5535714 0.1798690 5 0.713999 0.528025 1.8597e-01 1.7672e-05 9.9739e-01 weaklyHypermeth 1.9420e-04 1.0000e+00 weaklyHypermeth 8.0638e-03 9.9489e-01 weaklyHypermeth 7.3979e-02 1.0000e+00 weaklyHypermeth 0.0967411 2.6800e-01 lowCoverage 1.0000e+00 lowCoverage 0.7337165 0.6367041 0.08334283 5 0.713999 0.653394 0.06060497 1.8285e-02 9.4360e-01 weaklyHypermeth 3.2079e-01 1.0000e+00 insignificant 4.0645e-01 0.94498958 insignificant 1.0000e+00 1.00000 insignificant -2.8382e-02 7.6992e-01 lowCoverage 1.000000 lowCoverage 0.5535714 0.636704 -0.09130200 5 0.528025 0.653394 -0.1253684 9.8713e-01 6.0564e-02 insignificant 1.0000e+00 3.6050e-01 insignificant 9.8635e-01 1.4715e-01 insignificant 1.0000e+00 8.8643e-01 insignificant -0.1251230 1.5577e-01 lowCoverage 1.0000e+00 lowCoverage chr16 14401450 14402450 48286 MIR365-1 ENSG00000199130 0.8458029 341 12 0.725697 455 12 0.8040100 528 12 0.8395144 287 7 0.867610 219 11 0.812044 467 9 0.8229827 274 11 0.833054 340 11 0.8401095 313 11 0.9098455 292 11 0.877684 379 11 0.736109 269 11 0.8354307 341 11 0.8937039 146 5 0.909512 442 11 0.7887626 258 11 0.9085492 92 9 0.7156867 350 12 0.915329 373 11 0.779026 361 8 0.913840 146 10 0.6349473 182 10 0.879094 440 12 0.749258 174 11 0.8203295 93 5 0.8963792 460 12 0.672756 315 11 0.760926 236 10 0.7777498 240 11 0.890099 494 10 0.9036389 409 12 0.875443 486 11 0.2427628 517 12 0.2755454 265 11 0.197544 267 9 0.3257576 75 9 0.261504 402 11 0.3255026 411 12 0.7177758 352 8 0.7360725 337 11 0.8019705 336 11 0.6502011 354 11 0.770480 328 7 0.8687200 0.7430757 0.816098 0.8858554 0.8946127 0.8892755 0.8709474 0.8436879 0.8067541 0.8993416 0.880448 0.8312540 0.8436867 0.865052 0.8927027 0.7476672 0.9153707 0.63434968 0.8956826 0.8855015 0.8489249 0.6563823 0.863929 0.911328 0.8149317 0.8861642 0.785510 0.852163 0.8453000 0.9060961 0.9010650 0.860117 0.40183286 0.2549602 0.37845689 0.45734963 0.4194471 0.4239407 0.8102290 0.7387690 0.817018 0.7046951 0.7889579 8 0.8401533 0.8506122 -0.01991981 12 0.775075 0.821797 -0.04672165 0.934111 2.9840e-02 weaklyHypometh 1 8.5258e-01 insignificant 0.8068682 7.3567e-01 insignificant 1 1.0000e+00 insignificant 1.8485e-02 0.5546798 insignificant 1 insignificant 0.8401533 0.2462571 0.52501866 12 0.775075 0.258287 0.51678790 7.5686e-93 1.0000e+00 hypermethylated 2.5229e-90 1.0000e+00 hypermethylated 5.0220e-23 1.0000e+00 hypermethylated 8.3701e-21 1.0000e+00 hypermethylated 0.56158702 4.4049e-10 hypermethylated 4.8944e-08 hypermethylated 0.840811 0.7785589 0.0712892 11 0.824024 0.736741 0.08728293 1.1901e-10 5.8879e-01 weaklyHypermeth 1.4876e-08 1.0000e+00 weaklyHypermeth 2.1285e-04 7.4300e-01 weaklyHypermeth 1.5204e-02 1.0000e+00 weaklyHypermeth 0.0977232 1.3652e-02 weaklyHypermeth 0.3102635 insignificant 0.850612 0.2462571 0.5676087 12 0.821797 0.258287 5.6351e-01 2.3890e-69 1.0000e+00 hypermethylated 5.9725e-67 1.0000e+00 hypermethylated 2.5359e-19 1.0000e+00 hypermethylated 4.2264e-17 1.0000e+00 hypermethylated 0.5431022 3.3974e-11 hypermethylated 1.1977e-08 hypermethylated 0.8507911 0.7785589 0.10294890 11 0.831955 0.736741 0.09521385 6.3136e-09 8.9112e-01 weaklyHypermeth 4.2090e-07 1.0000e+00 weaklyHypermeth 1.6173e-03 0.88712555 weaklyHypermeth 5.7762e-02 1.00000 weaklyHypermeth 7.9238e-02 5.5871e-02 insignificant 0.886844 insignificant 0.2450675 0.778559 -0.40428556 11 0.228148 0.736741 -0.5085928 1.0000e+00 8.4318e-28 hypomethylated 1.0000e+00 1.0540e-25 hypomethylated 1.0000e+00 4.0318e-14 hypomethylated 1.0000e+00 8.0637e-12 hypomethylated -0.4638638 5.8090e-07 hypomethylated 1.1618e-04 hypomethylated chr16 14526950 14527950 48295 ENSG00000212739 0.6850994 187 10 0.811883 179 7 0.7058009 103 5 0.7852002 118 10 0.860920 121 7 0.799481 275 10 0.8221753 96 7 0.880423 110 7 0.7507586 96 5 0.9026137 93 5 0.734120 156 7 0.892778 65 5 0.8432633 143 7 0.8928571 48 2 0.768985 105 7 0.7747253 56 5 0.7377763 563 7 0.7285115 140 9 0.709848 81 5 0.700645 175 10 0.929231 56 5 0.8384615 47 3 0.853773 135 10 0.874725 43 5 0.8850000 50 4 0.7974127 189 7 0.853663 51 5 0.875794 67 5 0.8977533 105 7 0.770151 155 7 0.8548593 127 7 0.782686 296 10 0.8097413 126 7 0.6226190 59 7 0.809601 93 7 0.8095238 29 3 0.842994 86 7 0.6888671 136 5 0.7983239 200 10 0.7743643 191 10 0.8361183 174 10 0.8228666 141 8 0.724141 155 10 0.8107731 0.8600257 0.805145 0.8126368 0.9333686 0.8895624 0.8522665 0.9253341 0.8967717 0.9033179 0.900403 0.8907567 0.9040754 0.907598 0.9304238 0.9907162 0.8904927 0.88713282 0.8842907 0.8210504 0.9351901 0.8008400 0.879785 0.851989 0.8803161 0.8496894 0.840865 0.935616 0.9333974 0.7944573 0.8817613 0.869629 0.83367227 0.8741106 0.89800717 0.91187739 0.8542004 0.7007782 0.8683378 0.8942821 0.860781 0.9472804 0.8990175 3 0.8436639 0.8410295 0.01819131 7 0.774258 0.806914 -0.03265613 0.126706 4.2840e-01 insignificant 1 1.0000e+00 insignificant 0.7418607 4.0471e-01 insignificant 1 1.0000e+00 insignificant -6.1733e-02 0.0063175 weaklyHypometh 1 insignificant 0.8681973 0.7712665 0.08174323 7 0.787203 0.690189 0.09701442 1.2365e-05 9.9685e-01 weaklyHypermeth 1.2365e-04 1.0000e+00 weaklyHypermeth 1.8248e-01 6.2988e-01 insignificant 9.6548e-01 1.0000e+00 insignificant 0.02550221 5.3398e-01 insignificant 1.0000e+00 insignificant 0.843083 0.8118467 0.0187524 10 0.709736 0.794321 -0.08458511 3.6546e-01 7.9196e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.7463e-01 6.1375e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0017696 9.4583e-01 insignificant 1.0000000 insignificant 0.846336 0.7712665 0.0615640 7 0.842350 0.690189 1.5216e-01 5.9895e-04 9.9132e-01 weaklyHypermeth 5.2083e-03 1.0000e+00 weaklyHypermeth 1.4840e-01 8.2096e-01 insignificant 8.1092e-01 1.0000e+00 insignificant 0.0872347 5.8984e-02 insignificant 4.9153e-01 insignificant 0.8410295 0.8116279 -0.01381945 7 0.806914 0.775623 0.03129056 3.8036e-01 5.1519e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.7377e-01 0.88432380 insignificant 1.0000e+00 1.00000 insignificant 5.9963e-02 3.7377e-02 weaklyHypermeth 0.731940 insignificant 0.7712665 0.861244 -0.08403218 7 0.690189 0.812299 -0.1221098 9.8478e-01 2.0309e-02 weaklyHypometh 1.0000e+00 1.4717e-01 insignificant 8.2193e-01 3.5581e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0272718 5.2332e-01 insignificant 1.0000e+00 insignificant chr16 14703150 14704150 48299 PLA2G10 ENSG00000069764 0.6492241 233 9 0.548436 133 7 0.5373535 166 9 0.5889198 165 9 0.527546 90 6 0.725272 219 6 0.6728982 114 7 0.820588 108 7 0.6815166 124 5 0.7972789 81 5 0.559297 231 8 0.528571 64 3 0.5312192 118 8 0.6056410 61 5 0.584364 121 6 0.5720355 48 3 0.5457881 162 4 0.5671925 320 8 0.740000 86 6 0.730478 138 6 0.744156 61 5 0.7148718 69 4 0.581742 263 10 0.631327 93 4 0.7708516 74 7 0.7482013 151 10 0.793367 72 5 0.491880 63 5 0.5858100 99 6 0.592036 217 7 0.6222152 218 7 0.686644 252 7 0.3955611 254 10 0.6372100 100 9 0.473978 164 8 0.3907143 35 4 0.483554 164 6 0.6890951 197 7 0.5927173 208 8 0.5979270 165 7 0.6374259 243 9 0.5820988 154 7 0.677140 248 10 0.8756302 0.8426433 0.776604 0.8557792 0.7930086 0.8716548 0.8609852 0.9431657 0.8832051 0.9273637 0.824730 0.7805131 0.8768865 0.929976 0.8988585 0.7822145 0.8682633 0.82440056 0.9128288 0.8823860 0.7694962 0.8602309 0.904547 0.840583 0.8717949 0.8873136 0.955228 0.826483 0.8870587 0.9099383 0.8498536 0.858062 0.59442280 0.5693788 0.48031917 0.72032436 0.6935896 0.7303089 0.8619110 0.8345749 0.872116 0.8932342 0.8849675 3 0.7825306 0.8202454 -0.01844162 6 0.530101 0.560100 -0.02999908 0.962556 2.7302e-01 insignificant 1 1.0000e+00 insignificant 0.9557251 4.0244e-01 insignificant 1 1.0000e+00 insignificant -3.7911e-02 0.2784957 insignificant 1 insignificant 0.7856370 0.5426696 0.20321815 6 0.626483 0.553165 0.07331871 2.8440e-18 8.1915e-01 hypermethylated 7.9001e-17 1.0000e+00 hypermethylated 8.9792e-08 9.7138e-01 hypermethylated 3.0963e-06 1.0000e+00 hypermethylated 0.11399566 7.8222e-02 insignificant 6.3082e-01 insignificant 0.782812 0.7691552 -0.0046318 9 0.574276 0.604457 -0.03018049 8.6110e-01 5.4300e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.0761e-01 7.8776e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0082192 7.6879e-01 insignificant 1.0000000 insignificant 0.822154 0.5426696 0.2454996 6 0.639209 0.553165 8.6045e-02 1.8837e-15 9.5265e-01 hypermethylated 5.5402e-14 1.0000e+00 hypermethylated 3.5578e-06 9.9657e-01 hypermethylated 1.0227e-04 1.0000e+00 hypermethylated 0.1519065 2.9964e-02 weaklyHypermeth 3.0575e-01 insignificant 0.8207489 0.7691552 0.00716083 6 0.606775 0.604457 0.00231852 3.8383e-01 5.7952e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.6965e-01 0.88914656 insignificant 1.0000e+00 1.00000 insignificant 4.6130e-02 1.7164e-01 insignificant 1.000000 insignificant 0.5426696 0.769912 -0.21958409 6 0.553165 0.659407 -0.1062429 9.6264e-01 3.7714e-07 hypomethylated 1.0000e+00 9.4285e-06 hypomethylated 9.9534e-01 1.9584e-03 weaklyHypometh 1.0000e+00 3.4359e-02 weaklyHypometh -0.1057765 9.5672e-02 insignificant 7.7155e-01 insignificant chr16 14742250 14743250 48300 ENSG00000069651 0.6154374 201 8 0.741732 161 7 0.6707229 174 9 0.7557139 160 9 0.611667 64 6 0.720302 239 5 0.5271296 127 8 0.605529 113 7 0.6049123 115 6 0.8584221 116 6 0.567422 245 9 0.448995 64 4 0.5219737 121 8 0.6939394 70 8 0.569949 118 8 0.6542468 46 3 0.7748083 174 4 0.7112531 378 8 0.598120 107 8 0.712384 128 6 0.593474 67 6 0.9788839 78 3 0.688120 235 10 0.724860 93 7 0.8050000 47 4 0.6159416 149 10 0.661111 73 5 0.742857 73 7 0.6670799 120 9 0.596078 187 7 0.7204312 206 7 0.654833 248 7 0.5384014 255 10 0.4971292 95 6 0.455673 176 8 0.7202381 28 3 0.534828 150 6 0.4660065 228 7 0.6007432 220 9 0.5446500 211 10 0.6626996 252 10 0.5322409 181 9 0.663130 248 10 0.9220948 0.8600653 0.792789 0.9395357 0.8335008 0.8808577 0.8762144 0.8997620 0.8475315 0.9311563 0.910829 0.8440642 0.9268535 0.941039 0.9130627 0.8565597 0.8877791 0.85260793 0.8064501 0.8916806 0.7580761 0.9599127 0.928642 0.868010 0.9562814 0.9101612 0.822669 0.921847 0.9018425 0.9283002 0.8700184 0.890730 0.65561818 0.5058317 0.53665566 0.82417726 0.7141507 0.6283846 0.9239723 0.9349326 0.915735 0.8920017 0.8814901 3 0.7793765 0.8210660 -0.01248045 6 0.636544 0.599943 0.03660059 0.910987 5.3256e-02 insignificant 1 1.0000e+00 insignificant 0.9103689 9.0350e-02 insignificant 1 1.0000e+00 insignificant -5.5823e-02 0.1561609 insignificant 1 insignificant 0.7821306 0.4892704 0.23885089 6 0.706474 0.471194 0.23527951 3.7299e-18 9.9472e-01 hypermethylated 1.0081e-16 1.0000e+00 hypermethylated 4.6829e-06 9.4564e-01 hypermethylated 1.0890e-04 1.0000e+00 hypermethylated 0.11285376 3.6062e-02 weaklyHypermeth 3.5012e-01 insignificant 0.779225 0.7410072 0.0102538 9 0.606256 0.567651 0.03860438 1.3291e-01 4.3564e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.8656e-01 5.8904e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0475403 2.1272e-01 insignificant 1.0000000 insignificant 0.822293 0.4892473 0.2803442 6 0.608272 0.468794 1.3948e-01 1.2078e-18 9.5828e-01 hypermethylated 4.3135e-17 1.0000e+00 hypermethylated 5.3401e-07 9.8720e-01 hypermethylated 1.7800e-05 1.0000e+00 hypermethylated 0.1686765 6.2346e-03 weaklyHypermeth 9.3054e-02 weaklyHypermeth 0.8215873 0.7410072 0.01724465 6 0.649938 0.567651 0.08228708 3.0631e-02 7.2934e-01 weaklyHypermeth 4.7125e-01 1.0000e+00 insignificant 3.2590e-02 0.78953325 weaklyHypermeth 6.2673e-01 1.00000 insignificant 1.0336e-01 2.7566e-02 weaklyHypermeth 0.656335 insignificant 0.4903017 0.742342 -0.24704433 7 0.511411 0.619256 -0.1078446 7.4563e-01 1.0418e-08 hypomethylated 1.0000e+00 3.4507e-07 hypomethylated 6.6339e-01 2.2746e-03 weaklyHypometh 1.0000e+00 3.5540e-02 weaklyHypometh -0.0653135 2.1144e-01 insignificant 1.0000e+00 insignificant chr16 14860850 14861850 48301 NOMO1 ENSG00000103512 0.7932842 393 8 0.543400 286 8 0.8391159 120 5 0.8035427 318 8 0.845317 128 7 0.633622 390 8 0.6596105 174 8 0.585086 230 8 0.7126241 183 8 0.7680379 139 8 0.783747 370 9 0.728932 115 7 0.7537055 233 8 0.8013295 100 8 0.862936 185 8 0.8053571 90 8 0.6389857 519 4 0.6304807 393 8 0.778485 191 8 0.704207 302 8 0.723590 64 4 0.7269024 107 7 0.776234 250 8 0.658189 100 5 0.9367407 271 5 0.7578390 284 8 0.533654 113 5 0.680123 92 5 0.8454947 211 8 0.846603 277 8 0.7147982 228 8 0.786111 425 8 0.8152576 198 8 0.7671154 176 8 0.571695 240 7 0.9133333 40 4 0.551029 166 8 0.8282218 237 8 0.8380556 279 7 0.7329285 380 8 0.6175561 281 8 0.8083771 275 8 0.731048 332 8 0.8329397 0.7619777 0.748178 0.8458016 0.8384265 0.8605790 0.8155488 0.8015569 0.7700314 0.8559819 0.831379 0.7988538 0.8666843 0.817307 0.8511206 0.8280268 0.8274660 0.83486657 0.8286347 0.8697586 0.8867759 0.9301105 0.834425 0.840792 0.8828041 0.8486221 0.769083 0.889227 0.8216617 0.8455070 0.8568366 0.841421 0.82591447 0.8053527 0.84781576 0.87950506 0.7686419 0.8389750 0.8518864 0.8392283 0.835014 0.8494103 0.8310257 4 0.8258901 0.8369116 -0.01330365 8 0.686622 0.684191 0.00243044 0.302189 6.3947e-02 insignificant 1 1.0000e+00 insignificant 0.3835261 2.3407e-02 weaklyHypometh 1 8.9713e-01 insignificant -1.5266e-02 0.6777629 insignificant 1 insignificant 0.8258901 0.7710501 0.02542081 8 0.686622 0.626859 0.05976268 2.9351e-03 8.1726e-01 weaklyHypermeth 1.9802e-02 1.0000e+00 weaklyHypermeth 9.9070e-02 5.1841e-01 insignificant 5.7936e-01 1.0000e+00 insignificant -0.00751828 9.0944e-01 insignificant 1.0000e+00 insignificant 0.825890 0.8209438 -0.0112752 8 0.686622 0.618590 0.06803197 2.6502e-01 1.3579e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.0194e-01 1.1172e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0120028 7.9060e-01 insignificant 1.0000000 insignificant 0.836912 0.7710501 0.0435600 8 0.684191 0.626859 5.7332e-02 3.3605e-03 7.1467e-01 weaklyHypermeth 2.4351e-02 1.0000e+00 weaklyHypermeth 5.8039e-02 4.9657e-01 insignificant 3.7982e-01 1.0000e+00 insignificant 0.0077479 9.1107e-01 insignificant 1.0000e+00 insignificant 0.8369116 0.8209438 0.00399861 8 0.684191 0.618590 0.06560153 3.4733e-01 4.6885e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.8510e-01 0.28534249 insignificant 1.0000e+00 1.00000 insignificant 3.2634e-03 9.4785e-01 insignificant 1.000000 insignificant 0.7710501 0.820944 -0.04576847 8 0.626859 0.618590 0.0082693 9.9218e-01 4.9563e-02 weaklyHypometh 1.0000e+00 3.1172e-01 insignificant 9.7011e-01 3.3569e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0044845 9.5130e-01 insignificant 1.0000e+00 insignificant chr16 15144750 15145750 48305 PKD1P6 ENSG00000188599 0.5048291 863 34 0.250716 973 36 0.4068244 1046 36 0.4638008 602 23 0.344818 594 31 0.732380 843 34 0.3241549 766 35 0.395035 841 37 0.3258871 1002 35 0.4612629 1103 35 0.550945 1217 37 0.322627 1016 36 0.3516244 1168 35 0.4684715 411 13 0.427856 933 35 0.2458506 543 32 0.1596951 505 26 0.4130861 794 27 0.391795 1086 36 0.514337 774 34 0.469381 523 30 0.4272776 495 22 0.578298 659 35 0.487919 542 34 0.5278836 530 24 0.5626434 1076 36 0.531061 902 37 0.482921 414 22 0.4776794 803 36 0.503559 1197 36 0.5189740 1060 36 0.492672 1185 34 0.0998489 957 37 0.1162361 880 37 0.197147 791 33 0.0537406 397 29 0.171495 638 34 0.0407701 1420 37 0.5516177 727 31 0.5294355 904 37 0.5449746 508 24 0.4053624 743 27 0.548314 573 26 0.4479265 0.2441687 0.388626 0.4681357 0.3553201 0.7140465 0.3152171 0.3841638 0.2978188 0.4512126 0.475669 0.3227801 0.2930700 0.430203 0.4212337 0.2715115 0.1788439 0.33419135 0.3253910 0.4940691 0.4856795 0.3574611 0.508275 0.494846 0.4607730 0.4964403 0.488142 0.424992 0.4672761 0.5009628 0.4550295 0.445795 0.07602536 0.0951942 0.20352967 0.04940680 0.1646969 0.0326596 0.4931206 0.5466991 0.500817 0.4035390 0.5438075 20 0.3934657 0.4770887 -0.09031569 36 0.412489 0.479330 -0.06684111 1.000000 1.7697e-16 weaklyHypometh 1 1.7697e-13 weaklyHypometh 1.0000000 6.3446e-15 weaklyHypometh 1 6.3446e-12 weaklyHypometh -1.0222e-01 0.0024983 weaklyHypometh 1 insignificant 0.3937262 0.1001377 0.30646625 36 0.399944 0.105529 0.29441497 1.4460e-87 1.0000e+00 hypermethylated 3.6150e-85 1.0000e+00 hypermethylated 1.2341e-52 1.0000e+00 hypermethylated 6.1706e-50 1.0000e+00 hypermethylated 0.28959343 5.2029e-07 hypermethylated 3.7164e-05 hypermethylated 0.393508 0.4506512 -0.1092858 30 0.401692 0.512236 -0.11054350 9.9972e-01 3.2042e-17 weaklyHypometh 1.0000e+00 1.6021e-14 weaklyHypometh 9.9985e-01 5.2430e-15 weaklyHypometh 1.0000e+00 5.2430e-12 weaklyHypometh -0.1131411 1.3082e-02 weaklyHypometh 0.3042288 insignificant 0.477202 0.1001574 0.3943117 36 0.499075 0.107983 3.9109e-01 3.4972e-130 1.0000e+00 hypermethylated 1.7486e-127 1.0000e+00 hypermethylated 1.5815e-57 1.0000e+00 hypermethylated 1.5815e-54 1.0000e+00 hypermethylated 0.3918161 1.5674e-06 hypermethylated 1.0450e-04 hypermethylated 0.4772121 0.4506512 -0.02339536 30 0.499096 0.512236 -0.01313999 5.6419e-01 3.7090e-03 weaklyHypometh 1.0000e+00 2.9722e-01 insignificant 7.6682e-01 0.00997182 weaklyHypometh 1.0000e+00 0.62189 insignificant -1.0918e-02 7.3261e-01 insignificant 1.000000 insignificant 0.1001574 0.450492 -0.39226255 30 0.107983 0.500892 -0.3929092 1.0000e+00 3.1034e-77 hypomethylated 1.0000e+00 1.0345e-74 hypomethylated 1.0000e+00 5.6178e-33 hypomethylated 1.0000e+00 2.8089e-30 hypomethylated -0.4027346 2.8924e-06 hypomethylated 4.3426e-04 hypomethylated chr16 15154050 15155050 48306 ENSG00000207294 0.7236694 204 6 0.562956 341 6 0.6714909 155 6 0.8045434 258 6 0.602656 103 6 0.873324 374 6 0.7004155 154 6 0.698834 166 6 0.7048611 149 6 0.7974264 112 6 0.776505 300 6 0.491594 55 6 0.7019323 234 6 0.7761983 87 6 0.771961 133 6 0.7227564 39 4 0.7619048 16 2 0.7612685 264 6 0.781432 263 6 0.835303 299 6 0.684429 95 6 0.4643519 72 3 0.829024 179 6 0.686831 129 6 0.9206349 45 3 0.7701386 353 6 0.613116 184 6 0.532880 52 6 0.7521208 271 6 0.838648 371 6 0.7730286 426 6 0.800708 330 6 0.0337055 312 6 0.0069444 196 6 0.016667 293 6 0.2000000 25 1 0.022601 263 6 0.3357841 348 6 0.7928368 172 6 0.6975715 218 6 0.8294169 152 6 0.6853562 175 6 0.788836 173 6 0.7043363 0.6373027 0.652590 0.7820930 0.5137762 0.8592647 0.6765991 0.6903538 0.6939029 0.7582511 0.760211 0.4728627 0.6795714 0.752202 0.7412326 0.7224330 0.7139565 0.73139700 0.7713568 0.8196631 0.6699503 0.5273657 0.830437 0.671755 0.9145187 0.7489223 0.601185 0.615625 0.7199355 0.8246735 0.7480268 0.791097 0.03150113 0.0078364 0.01146789 0.11714450 0.0223963 0.2884701 0.7819449 0.6737101 0.811352 0.7604895 0.7619322 4 0.7136302 0.7339450 -0.01783119 6 0.783499 0.654807 0.12869184 0.969280 5.3995e-01 insignificant 1 1.0000e+00 insignificant 0.8445191 7.7253e-01 insignificant 1 1.0000e+00 insignificant 3.8925e-03 0.9295728 insignificant 1 insignificant 0.7135529 0.0967293 0.62955253 6 0.747415 0.097201 0.65021388 9.4484e-53 1.0000e+00 hypermethylated 1.0498e-50 1.0000e+00 hypermethylated 1.6284e-16 1.0000e+00 hypermethylated 1.6284e-14 1.0000e+00 hypermethylated 0.62343467 2.6176e-05 hypermethylated 1.1213e-03 hypermethylated 0.713360 0.7325843 -0.0147370 6 0.640642 0.659375 -0.01873322 8.3759e-01 5.2658e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.5668e-01 2.3926e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0327519 3.7549e-01 insignificant 1.0000000 insignificant 0.734238 0.0967293 0.6471013 6 0.763941 0.097201 6.6674e-01 2.1037e-41 1.0000e+00 hypermethylated 1.9124e-39 1.0000e+00 hypermethylated 2.5185e-13 1.0000e+00 hypermethylated 1.9373e-11 1.0000e+00 hypermethylated 0.6195422 3.5506e-06 hypermethylated 1.8959e-04 hypermethylated 0.7342378 0.7342342 0.00098266 6 0.763941 0.769271 -0.00532923 6.2474e-01 5.0319e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4088e-01 0.17198324 insignificant 1.0000e+00 1.00000 insignificant -3.6644e-02 4.5455e-01 insignificant 1.000000 insignificant 0.0967293 0.734234 -0.64843727 6 0.097201 0.769271 -0.6720693 1.0000e+00 2.7054e-24 hypomethylated 1.0000e+00 2.7054e-22 hypomethylated 1.0000e+00 8.9875e-10 hypomethylated 1.0000e+00 8.1705e-08 hypomethylated -0.6561865 1.0456e-05 hypomethylated 8.7135e-04 hypomethylated chr16 15673950 15674950 48328 MIR484 ENSG00000072864 0.8976375 174 7 0.830124 293 7 0.6976579 81 7 0.7426091 195 7 0.858418 82 7 0.893577 323 7 0.7074009 146 7 0.816021 110 7 0.8290816 60 6 0.8714286 40 4 0.919372 227 7 0.738095 23 2 0.8500000 39 5 0.7520282 57 7 0.834586 66 5 0.8785714 32 4 0.7742546 181 2 0.8462909 98 5 0.853722 118 7 0.945905 239 7 0.730640 56 6 0.7142857 9 0 0.711352 137 7 0.799315 98 7 0.5802885 94 2 0.8049327 257 7 0.873039 63 5 0.862963 33 5 0.9042834 123 7 0.920574 239 7 0.9175100 257 7 0.918035 199 7 0.3905754 202 7 0.2694615 129 7 0.340949 329 7 0.5000000 102 2 0.300724 221 7 0.3616925 253 7 0.8143418 223 7 0.8078618 254 7 0.7494154 169 7 0.8319292 65 4 0.782564 216 7 0.8662168 0.8156993 0.733322 0.8213836 0.8455189 0.8498979 0.7824845 0.8045505 0.8182278 0.8712264 0.908626 0.7216981 0.9603774 0.782929 0.8305611 0.8457547 0.8456845 0.84713276 0.8351326 0.9328148 0.8213265 0.6981132 0.852330 0.903852 0.6591800 0.8562343 0.785932 0.810692 0.8778464 0.9049237 0.8983993 0.894457 0.36212189 0.3289549 0.31337999 0.44976934 0.4366141 0.4491211 0.7890923 0.8084458 0.770949 0.7764980 0.7983841 0 0.8749032 0.8888179 -0.01291745 7 0.837630 0.792179 0.04545127 0.701017 3.6913e-01 insignificant 1 1.0000e+00 insignificant 0.9077534 3.2324e-01 insignificant 1 1.0000e+00 insignificant 1.5404e-02 0.6656497 insignificant 1 insignificant 0.8740798 0.1747573 0.65331413 7 0.721393 0.408386 0.31300777 2.4839e-62 1.0000e+00 hypermethylated 3.5484e-60 1.0000e+00 hypermethylated 3.1059e-09 9.9998e-01 hypermethylated 1.2941e-07 1.0000e+00 hypermethylated 0.46627199 2.5360e-06 hypermethylated 1.3347e-04 hypermethylated 0.875437 0.8166127 0.0860205 7 0.801393 0.798073 0.00332035 2.4070e-04 9.3489e-01 weaklyHypermeth 8.3000e-03 1.0000e+00 weaklyHypermeth 1.6333e-02 9.7950e-01 weaklyHypermeth 3.7120e-01 1.0000e+00 insignificant 0.0296167 1.8447e-01 insignificant 1.0000000 insignificant 0.890173 0.1740891 0.7081855 7 0.793616 0.342651 4.5097e-01 4.8652e-44 9.9990e-01 hypermethylated 5.4058e-42 1.0000e+00 hypermethylated 1.0882e-08 9.9999e-01 hypermethylated 5.1820e-07 1.0000e+00 hypermethylated 0.4508677 1.7354e-07 hypermethylated 1.3349e-05 hypermethylated 0.8918919 0.8164147 0.12255055 7 0.812663 0.775637 0.03702661 1.1328e-04 7.4265e-01 weaklyHypermeth 3.4417e-03 1.0000e+00 weaklyHypermeth 2.7157e-02 0.96963441 weaklyHypermeth 5.4314e-01 1.00000 insignificant 1.4212e-02 6.8572e-01 insignificant 1.000000 insignificant 0.1751825 0.817297 -0.60443080 7 0.453762 0.831192 -0.3774305 1.0000e+00 7.4102e-29 hypomethylated 1.0000e+00 1.0586e-26 hypomethylated 9.9999e-01 1.9773e-05 hypomethylated 1.0000e+00 8.5969e-04 hypomethylated -0.4366553 7.6479e-06 hypomethylated 7.1333e-04 hypomethylated chr16 15998050 15999050 48340 ABCC1 ENSG00000103222 0.6299622 519 11 0.693890 550 11 0.7502984 313 11 0.8869085 433 11 0.663008 206 12 0.868362 606 11 0.8815441 260 11 0.708978 286 12 0.8093712 142 9 0.8847697 168 10 0.854664 590 12 0.827778 73 8 0.8071675 250 9 0.7465556 191 10 0.777986 325 10 0.7600000 42 3 0.7101314 1313 3 0.8155948 607 11 0.810010 685 10 0.901355 649 9 0.797535 180 9 0.9166667 15 0 0.895432 283 12 0.704636 147 9 0.6925595 161 6 0.8228325 555 13 0.789835 307 11 0.760539 193 10 0.8125093 452 11 0.827667 507 12 0.6967071 459 12 0.787008 470 11 0.8406053 347 11 0.8259694 320 9 0.758772 709 11 0.5564738 147 2 0.752420 280 10 0.7931116 629 12 0.7590851 584 11 0.8090283 545 12 0.8119031 439 11 0.8690582 523 9 0.791375 489 11 0.8106189 0.7057559 0.698256 0.8671417 0.7130413 0.8807822 0.7901864 0.8230777 0.7995578 0.8715118 0.801855 0.7146396 0.8332539 0.749391 0.7873394 0.6964407 0.9005630 0.72014163 0.8730820 0.8893624 0.8128372 0.8294340 0.838758 0.776687 0.6646545 0.7941477 0.730549 0.697792 0.7902330 0.8383697 0.8187218 0.856801 0.72328721 0.8111435 0.77702311 0.50496006 0.6949628 0.8172134 0.8197290 0.8156400 0.815715 0.8210704 0.7802983 5 0.8495370 0.8118626 0.03461801 11 0.785878 0.757392 0.02848586 0.189032 8.1099e-01 insignificant 1 1.0000e+00 insignificant 0.3938828 5.0446e-01 insignificant 1 1.0000e+00 insignificant -2.5772e-03 0.9256087 insignificant 1 insignificant 0.8495370 0.7914439 0.05548562 11 0.785878 0.791854 -0.00597651 2.0739e-04 3.2567e-01 weaklyHypermeth 1.6725e-03 1.0000e+00 weaklyHypermeth 2.2155e-02 4.8701e-01 weaklyHypermeth 1.8012e-01 1.0000e+00 insignificant 0.03485799 4.7140e-01 insignificant 1.0000e+00 insignificant 0.849537 0.8270648 0.0227348 10 0.785878 0.812651 -0.02677308 8.0748e-01 2.1271e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6243e-01 2.4382e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0186732 4.7313e-01 insignificant 1.0000000 insignificant 0.811863 0.7914439 0.0226930 11 0.757392 0.791854 -3.4462e-02 5.0135e-03 1.9115e-02 weaklyHypermeth 3.4105e-02 1.0000e+00 weaklyHypermeth 4.7607e-02 1.5170e-01 weaklyHypermeth 3.2167e-01 1.0000e+00 insignificant 0.0374352 4.4964e-01 insignificant 1.0000e+00 insignificant 0.8120139 0.8267442 -0.01856750 10 0.771663 0.764848 0.00681512 9.5079e-01 3.2773e-02 weaklyHypometh 1.0000e+00 9.3637e-01 insignificant 8.6229e-01 0.11882352 insignificant 1.0000e+00 1.00000 insignificant -1.6096e-02 5.6634e-01 insignificant 1.000000 insignificant 0.7914439 0.827065 -0.03976481 10 0.791854 0.812651 -0.0207966 7.7101e-01 7.6197e-02 insignificant 1.0000e+00 4.3541e-01 insignificant 9.5625e-01 1.3476e-01 insignificant 1.0000e+00 8.3580e-01 insignificant -0.0535312 2.8219e-01 insignificant 1.0000e+00 insignificant chr16 16029450 16030450 48348 ABCC1 ENSG00000103222 0.9558661 305 7 0.872882 585 8 0.8988096 389 8 0.8162051 268 4 0.936045 229 8 0.912061 526 7 0.9618859 392 8 0.946725 316 7 0.8950212 394 8 0.9864162 217 7 0.944454 489 8 0.907489 180 7 0.9637398 277 7 0.9785621 164 4 0.934110 366 8 0.8869388 215 7 0.9687500 98 4 0.9335195 299 4 0.965153 679 8 0.963595 372 8 0.711086 158 8 0.8459055 117 4 0.802425 321 8 0.970950 193 8 0.9459877 60 4 0.9534598 577 8 0.893377 312 7 0.934066 215 7 0.9205259 509 8 0.944243 702 8 0.9541447 494 8 0.850611 381 7 0.9298567 355 7 0.9404564 234 7 0.819503 576 6 0.9200000 15 1 0.963572 389 8 0.9631211 433 8 0.9688080 310 6 0.9313969 311 6 0.9833549 221 5 0.9708499 194 4 0.987199 235 4 0.9194713 0.8407739 0.812429 0.9281225 0.9331457 0.9269996 0.9555155 0.8858979 0.9109046 0.9703836 0.937834 0.8873328 0.9692132 0.972530 0.9159037 0.8634129 0.9184608 0.91828641 0.9514762 0.9448683 0.8841213 0.9585170 0.947548 0.972810 0.9442418 0.9336228 0.908760 0.879239 0.9152958 0.9419856 0.9184393 0.954267 0.92114459 0.9744211 0.94851292 0.95392740 0.9528912 0.9575406 0.9323864 0.8923010 0.961610 0.9431171 0.9780869 4 0.9235207 0.9318970 -0.00966450 8 0.944979 0.780006 0.16497371 0.670697 6.7054e-01 insignificant 1 1.0000e+00 insignificant 0.6003361 7.2895e-01 insignificant 1 1.0000e+00 insignificant 3.7513e-02 0.1446423 insignificant 1 insignificant 0.9234981 0.9420579 -0.01966887 8 0.938866 0.840896 0.09797009 4.2385e-01 2.6053e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.2994e-01 2.6611e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 0.00865994 7.2678e-01 insignificant 1.0000e+00 insignificant 0.923475 0.9354839 -0.0165938 6 0.931224 0.964055 -0.03283033 9.9923e-01 4.7922e-03 weaklyHypometh 1.0000e+00 2.1783e-01 insignificant 9.9963e-01 1.8315e-03 weaklyHypometh 1.0000e+00 1.5262e-01 insignificant -0.0369102 1.8732e-02 weaklyHypometh 0.3747492 insignificant 0.932342 0.9420579 -0.0103372 8 0.829636 0.840896 -1.1260e-02 3.3558e-01 3.2446e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 8.6514e-01 4.9122e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0288530 3.7287e-01 insignificant 1.0000e+00 insignificant 0.9325731 0.9354839 -0.00516108 6 0.933340 0.964055 -0.03071412 9.8895e-01 2.0544e-02 weaklyHypometh 1.0000e+00 7.0843e-01 insignificant 9.7876e-01 0.01136475 weaklyHypometh 1.0000e+00 0.62189 insignificant -7.4423e-02 8.8442e-03 weaklyHypometh 0.366880 insignificant 0.9425287 0.935484 0.00563388 6 0.946008 0.964055 -0.0180467 5.9947e-01 1.1537e-01 insignificant 1.0000e+00 6.0403e-01 insignificant 7.9417e-01 1.8289e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0455702 9.9848e-02 insignificant 7.9244e-01 insignificant chr16 16259550 16260550 48350 NOMO3 ENSG00000103226 0.7935281 107 5 0.798810 121 5 0.5222222 66 5 0.8462598 139 5 0.757143 25 3 0.813315 167 5 0.7085714 23 3 0.852869 74 5 0.6884615 76 5 0.8024043 65 5 0.828977 149 5 0.933333 11 0 0.8233766 70 5 0.8565657 52 5 0.695000 52 5 0.5733333 21 3 0.5666667 11 0 0.7434995 147 5 0.795906 83 5 0.756211 110 5 0.847619 21 2 0.9444444 38 2 0.766601 70 5 0.927083 22 2 0.7013889 23 2 0.8527393 125 5 0.627273 28 3 0.500000 10 0 0.8476190 39 5 0.806785 150 5 0.7917043 148 5 0.740027 120 5 0.6832329 117 5 0.6966874 94 5 0.744130 181 5 1.0000000 3 0 0.646418 85 5 0.8257708 105 5 0.7025974 58 5 0.7901006 115 5 0.8100000 91 5 0.8433566 61 5 0.805482 149 5 0.7687556 0.7860997 0.508910 0.8236868 0.7318059 0.7684002 0.7223720 0.8688806 0.6912192 0.7529898 0.815979 0.9056604 0.8201421 0.846579 0.7023585 0.5723270 0.4748428 0.70633911 0.7882040 0.7359370 0.7825966 0.9197634 0.730417 0.905350 0.7853774 0.8401382 0.688679 0.626829 0.8472597 0.7933313 0.7464676 0.710024 0.68760020 0.6414118 0.73646016 0.97040163 0.6517461 0.8018197 0.7119579 0.7711820 0.799686 0.7968070 0.8110515 0 0.7705545 0.7997481 -0.01735696 5 0.813479 0.745204 0.06827465 0.826247 3.8863e-01 insignificant 1 1.0000e+00 insignificant 0.9443873 4.0228e-01 insignificant 1 1.0000e+00 insignificant -2.1618e-02 0.6232541 lowCoverage 1 lowCoverage 0.7705545 0.7247863 0.04159258 5 0.813479 0.697186 0.11629304 1.6962e-01 8.7981e-01 insignificant 8.0771e-01 1.0000e+00 insignificant 7.0407e-01 7.9687e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00821709 8.9165e-01 lowCoverage 1.0000e+00 lowCoverage 0.770408 0.7679325 -0.0210526 5 0.776175 0.799310 -0.02313532 8.7348e-01 3.0291e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.0267e-01 5.9346e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0324847 3.4875e-01 lowCoverage 1.0000000 lowCoverage 0.799748 0.7247863 0.0606864 5 0.745204 0.697186 4.8018e-02 1.0544e-01 8.0859e-01 insignificant 5.1940e-01 1.0000e+00 insignificant 4.6940e-01 9.2150e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0134005 8.3931e-01 lowCoverage 1.0000e+00 lowCoverage 0.8005051 0.7679325 -0.00568162 5 0.794245 0.799310 -0.00506490 6.1748e-01 3.7878e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.7978e-01 0.78133492 insignificant 1.0000e+00 1.00000 insignificant -1.0867e-02 8.0510e-01 lowCoverage 1.000000 lowCoverage 0.7255575 0.767932 -0.06029665 5 0.736623 0.799310 -0.0626870 9.6429e-01 1.0235e-01 insignificant 1.0000e+00 5.5931e-01 insignificant 9.4930e-01 4.5964e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0242676 6.8925e-01 lowCoverage 1.0000e+00 lowCoverage chr16 18877750 18878750 48364 SMG1 ENSG00000157106 0.7344809 253 6 0.612966 107 6 0.6306426 88 6 0.7056685 130 6 0.610043 47 3 0.666474 227 6 0.6801285 81 6 0.690741 75 6 0.6587995 75 6 0.5386752 55 3 0.673974 155 6 0.627389 48 5 0.6468319 126 6 NA 0 0 0.681746 87 6 0.6695411 64 6 0.6721657 89 6 0.6265528 129 6 0.804972 116 6 0.655786 163 6 0.734578 45 6 0.4981685 44 3 0.757326 106 6 0.529630 34 3 0.6693122 48 6 0.7751263 125 6 0.750000 36 3 0.732143 26 3 0.5607143 61 6 0.717163 175 6 0.6185158 191 6 0.665387 272 6 0.5726496 100 5 0.5209577 94 6 0.637468 124 6 0.7161681 59 6 0.744250 69 5 0.5816131 206 6 0.7241379 166 6 0.7853535 165 6 0.7605892 163 6 0.7097005 228 6 0.746271 142 6 0.7068211 0.6125618 0.568958 0.6897059 0.6047530 0.6361903 0.6699437 0.6895664 0.6370459 0.5286507 0.648600 0.6208511 0.6011660 NA 0.6617015 0.6327802 0.6234963 0.55404484 0.7575650 0.6497575 0.7197894 0.5878451 0.718087 0.560298 0.6007549 0.7365068 0.670732 0.638593 0.5673345 0.6991325 0.6026383 0.671494 0.53883677 0.5250210 0.60405118 0.65617834 0.6957852 0.5740287 0.7033868 0.7711567 0.729349 0.6754230 0.7093703 3 0.6737589 0.6706793 -0.01639883 6 0.677054 0.686116 -0.00906225 0.863880 2.0230e-01 insignificant 1 1.0000e+00 insignificant 0.9284300 1.6441e-01 insignificant 1 1.0000e+00 insignificant -4.8345e-03 0.8745284 insignificant 1 insignificant 0.6737589 0.5874233 0.06411190 6 0.677054 0.610265 0.06678877 9.7894e-05 8.5650e-01 weaklyHypermeth 8.4391e-04 1.0000e+00 weaklyHypermeth 1.6910e-02 6.4879e-01 weaklyHypermeth 1.4330e-01 1.0000e+00 insignificant 0.03365300 4.0545e-01 insignificant 1.0000e+00 insignificant 0.673759 0.7476852 -0.0644027 6 0.677054 0.742035 -0.06498102 9.9409e-01 4.6220e-04 weaklyHypometh 1.0000e+00 5.1355e-02 weaklyHypometh 9.9615e-01 6.1281e-04 weaklyHypometh 1.0000e+00 6.1281e-02 weaklyHypometh -0.0827063 6.8703e-04 weaklyHypometh 0.0528485 weaklyHypometh 0.670679 0.5874233 0.0790442 6 0.686116 0.610265 7.5851e-02 7.9679e-05 9.8128e-01 weaklyHypermeth 7.5169e-04 1.0000e+00 weaklyHypermeth 6.8251e-03 9.2269e-01 weaklyHypermeth 6.4387e-02 1.0000e+00 weaklyHypermeth 0.0384875 4.1007e-01 insignificant 1.0000e+00 insignificant 0.6706793 0.7476852 -0.04975432 6 0.686116 0.742035 -0.05591877 9.4139e-01 2.5291e-02 weaklyHypometh 1.0000e+00 7.6964e-01 insignificant 8.7579e-01 0.06226534 insignificant 1.0000e+00 1.00000 insignificant -7.7872e-02 2.2318e-02 weaklyHypometh 0.565164 insignificant 0.5874233 0.747685 -0.12812245 6 0.610265 0.742035 -0.1317698 1.0000e+00 9.8153e-06 weaklyHypometh 1.0000e+00 1.9246e-04 weaklyHypometh 1.0000e+00 6.3168e-04 weaklyHypometh 1.0000e+00 1.5253e-02 weaklyHypometh -0.1163593 2.0712e-02 weaklyHypometh 2.5890e-01 insignificant chr16 20830950 20831950 48402 LYRM1 ENSG00000102897 0.8397813 318 8 0.848320 139 8 0.8135130 170 9 0.9120324 181 8 0.854901 98 8 0.833491 446 9 0.7867217 131 9 0.789782 150 8 0.8213542 137 9 0.8951888 118 8 0.839153 314 9 0.818557 84 8 0.8915116 152 8 0.9285714 17 2 0.922591 162 8 0.6923916 80 8 0.7867965 72 8 0.8870963 257 9 0.810321 184 9 0.897903 407 9 0.634318 76 6 0.8489427 116 8 0.817673 204 9 0.745566 72 7 0.8363636 46 6 0.7937963 150 8 0.811199 91 8 0.744048 47 6 0.7626567 155 8 0.852687 130 7 0.8546192 174 9 0.852984 539 9 0.6908641 143 9 0.6300148 140 8 0.750794 158 7 0.8461310 66 5 0.770808 120 8 0.8008284 217 9 0.8850405 296 9 0.9189900 299 9 0.8153539 269 9 0.8882762 252 9 0.819699 329 9 0.8333431 0.8107787 0.808657 0.8757595 0.8070962 0.8009428 0.7545389 0.7691368 0.7830564 0.8897193 0.799637 0.8025347 0.8602726 0.871240 0.9044652 0.6865179 0.7422079 0.86761393 0.7885787 0.8690729 0.7093783 0.8111897 0.816044 0.764572 0.8099283 0.7609179 0.774580 0.759522 0.7641657 0.7887359 0.8170160 0.849857 0.68437532 0.5436278 0.70289496 0.83631815 0.7600801 0.7887935 0.8401266 0.9007892 0.862987 0.8475190 0.8228461 6 0.8366049 0.8100000 0.02128625 9 0.849212 0.827613 0.02159927 0.055550 9.4456e-01 insignificant 1 1.0000e+00 insignificant 0.0080586 9.7748e-01 weaklyHypermeth 1 1.0000e+00 insignificant 4.7261e-02 0.0522350 insignificant 1 insignificant 0.8366049 0.7037915 0.12429365 9 0.849212 0.724819 0.12439294 7.4069e-10 1.0000e+00 weaklyHypermeth 1.1223e-08 1.0000e+00 weaklyHypermeth 6.5067e-04 9.9939e-01 weaklyHypermeth 7.9350e-03 1.0000e+00 weaklyHypermeth 0.09525891 2.8189e-02 weaklyHypermeth 2.9672e-01 insignificant 0.836605 0.8664360 -0.0279381 9 0.849212 0.861987 -0.01277541 9.3081e-01 9.7310e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8756e-01 1.4252e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0219730 3.9199e-01 insignificant 1.0000000 insignificant 0.810000 0.7037915 0.1022154 9 0.827613 0.724819 1.0279e-01 8.9988e-05 9.9944e-01 weaklyHypermeth 8.3310e-04 1.0000e+00 weaklyHypermeth 2.6733e-02 9.1874e-01 weaklyHypermeth 2.0342e-01 1.0000e+00 insignificant 0.0479979 2.2712e-01 insignificant 1.0000e+00 insignificant 0.8100000 0.8664360 -0.04806979 9 0.827613 0.861987 -0.03437468 9.8618e-01 2.4449e-02 weaklyHypometh 1.0000e+00 7.6964e-01 insignificant 9.9490e-01 0.00259305 weaklyHypometh 1.0000e+00 0.36150 insignificant -6.9234e-02 3.0693e-02 weaklyHypometh 0.686594 insignificant 0.7037915 0.866436 -0.15287216 9 0.724819 0.861987 -0.1371683 1.0000e+00 2.6150e-05 weaklyHypometh 1.0000e+00 4.5087e-04 weaklyHypometh 9.9998e-01 8.3679e-04 weaklyHypometh 1.0000e+00 1.8414e-02 weaklyHypometh -0.1172319 1.3969e-02 weaklyHypometh 2.0849e-01 insignificant chr16 21288950 21289950 48409 CRYM ENSG00000103316 0.8105392 73 5 0.557540 80 5 0.6800000 58 5 0.5966667 50 4 0.652778 24 2 0.610729 65 5 0.7012821 25 1 0.577652 63 5 0.7083333 18 1 0.5809524 18 1 0.696621 110 5 0.479167 13 0 0.7428571 36 4 0.6785714 25 1 0.690476 43 4 0.0000000 3 0 1.0000000 3 0 0.3904762 39 4 0.761905 22 1 0.775794 41 5 0.593750 12 1 NA 0 0 0.733333 22 2 0.780000 21 3 0.7500000 11 1 0.6212121 59 5 0.914286 13 1 0.350000 10 1 0.7250000 49 4 0.653009 82 5 0.6393301 88 5 0.687302 70 5 0.6682234 49 5 0.6200000 25 4 0.333333 6 1 1.0000000 1 0 0.433102 53 5 0.6840476 79 5 0.7038961 54 5 0.6575000 50 4 0.5857143 58 4 0.7083333 11 0 0.710390 50 5 0.6969697 0.2766234 0.454545 0.0818182 0.2424242 0.3334954 0.3111888 0.3667355 0.6590909 0.6103896 0.494194 0.3101516 0.3939394 0.318182 0.1558442 0.0000000 NA 0.27272727 0.5670996 0.3863636 0.4318182 NA 0.393939 0.454545 0.5454545 0.5454545 0.610390 0.454545 0.3506494 0.3068182 0.4504132 0.535354 0.29420579 0.5454545 0.39150433 0.41684982 0.3579545 0.4805195 0.5389610 0.3125000 0.090909 0.5403446 0.5371901 0 0.6376090 0.6521739 -0.00544588 5 0.653290 0.711455 -0.05816517 0.824223 5.1263e-01 insignificant 1 1.0000e+00 insignificant 0.9684477 2.2160e-01 insignificant 1 1.0000e+00 insignificant -4.2403e-02 0.4929380 lowCoverage 1 lowCoverage 0.6372671 0.6150235 0.03288334 5 0.631391 0.580721 0.05067083 4.1164e-01 8.7557e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.2095e-01 8.7987e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01149926 9.1511e-01 lowCoverage 1.0000e+00 lowCoverage 0.637500 0.7354260 -0.0313173 4 0.650615 0.683211 -0.03259653 8.1225e-01 1.6667e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.5137e-01 1.8536e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0385497 4.4914e-01 lowCoverage 1.0000000 lowCoverage 0.652174 0.6132075 0.0401623 5 0.711455 0.510841 2.0061e-01 5.1002e-01 9.6320e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.6366e-01 9.9671e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0539025 6.1853e-01 lowCoverage 1.0000e+00 lowCoverage 0.6513761 0.7354260 -0.02841658 4 0.653746 0.683211 -0.02946499 8.6703e-01 2.8721e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 5.7867e-01 0.36929238 lowCoverage 1.0000e+00 1.00000 lowCoverage 3.8535e-03 9.3793e-01 lowCoverage 1.000000 lowCoverage 0.6161137 0.735426 -0.06561679 4 0.613009 0.683211 -0.0702024 8.9997e-01 4.1774e-02 lowCoverage 1.0000e+00 2.7126e-01 lowCoverage 8.0454e-01 6.0183e-02 lowCoverage 1.0000e+00 4.4913e-01 lowCoverage -0.0500490 6.2715e-01 lowCoverage 1.0000e+00 lowCoverage chr16 21426750 21427750 48410 ENSG00000205691 0.7067248 759 12 0.667663 845 11 0.6943189 428 15 0.7296080 855 13 0.687462 215 9 0.736784 1086 12 0.6504837 394 13 0.617161 311 11 0.6607624 438 13 0.7575250 386 15 0.674810 832 11 0.760093 153 13 0.6738256 323 11 0.7252165 162 5 0.747794 331 15 0.6879890 145 12 0.5273227 141 9 0.7355760 790 13 0.743460 743 12 0.753517 1009 12 0.583166 234 10 0.5450570 198 9 0.688265 558 13 0.620788 285 10 0.6508919 523 8 0.6459837 1040 13 0.556023 372 9 0.646650 168 9 0.7155974 617 10 0.791645 1117 13 0.7812752 1080 13 0.730525 1134 13 0.6796375 641 10 0.4433712 544 11 0.435133 772 10 0.5440515 163 11 0.499970 434 8 0.6383397 1098 13 0.6691550 477 13 0.5453042 543 13 0.7428597 776 12 0.6068643 940 16 0.759563 599 12 0.8297138 0.7762625 0.795608 0.8409227 0.8529466 0.8621630 0.7902822 0.8414513 0.7863968 0.8451773 0.832445 0.8196101 0.8362437 0.837497 0.8639041 0.6406680 0.8174843 0.81093376 0.8646772 0.8617808 0.8360500 0.7169430 0.825043 0.762890 0.8235929 0.8475720 0.770728 0.778140 0.8019642 0.8767239 0.8785994 0.847830 0.70407481 0.4942476 0.79619410 0.83591849 0.6866583 0.8606158 0.8261102 0.7347447 0.815274 0.7673674 0.8229520 6 0.8173207 0.8366093 -0.00543372 12 0.634060 0.670290 -0.03622972 0.321125 1.5954e-01 insignificant 1 1.0000e+00 insignificant 0.2007177 4.2907e-01 insignificant 1 1.0000e+00 insignificant 3.3916e-02 0.2204018 insignificant 1 insignificant 0.8210158 0.7102957 0.12742937 12 0.696755 0.558504 0.13825038 2.0317e-11 9.5109e-01 weaklyHypermeth 3.8334e-10 1.0000e+00 weaklyHypermeth 1.5089e-03 9.5928e-01 weaklyHypermeth 1.6582e-02 1.0000e+00 weaklyHypermeth 0.15682097 1.1025e-02 weaklyHypermeth 1.4401e-01 insignificant 0.821096 0.7769115 0.0303224 12 0.735463 0.684826 0.05063782 3.4009e-04 9.4691e-01 weaklyHypermeth 1.0971e-02 1.0000e+00 weaklyHypermeth 4.0074e-02 9.4613e-01 weaklyHypermeth 6.6019e-01 1.0000e+00 insignificant 0.0321556 4.8364e-01 insignificant 1.0000000 insignificant 0.836908 0.7102957 0.1347923 12 0.696987 0.558504 1.3848e-01 1.3783e-09 9.9776e-01 weaklyHypermeth 2.6006e-08 1.0000e+00 weaklyHypermeth 5.4548e-02 9.9941e-01 insignificant 3.6124e-01 1.0000e+00 insignificant 0.1229051 3.1074e-02 weaklyHypermeth 3.1388e-01 insignificant 0.8370219 0.7769115 0.03123854 12 0.735709 0.684826 0.05088304 3.9435e-05 7.9954e-01 weaklyHypermeth 1.3145e-03 1.0000e+00 weaklyHypermeth 3.9875e-02 0.78454202 weaklyHypermeth 7.1885e-01 1.00000 insignificant -1.7603e-03 9.7105e-01 insignificant 1.000000 insignificant 0.7106849 0.776912 -0.10423381 13 0.589532 0.684826 -0.0952931 8.6032e-01 1.3316e-04 weaklyHypometh 1.0000e+00 1.9023e-03 weaklyHypometh 9.7714e-01 7.3316e-02 insignificant 1.0000e+00 5.1997e-01 insignificant -0.1246654 5.9609e-02 insignificant 5.3702e-01 insignificant chr16 22155450 22156450 48423 EEF2K ENSG00000103319 0.8450480 263 6 0.815353 325 7 0.8891128 160 5 0.9223177 274 6 0.865079 97 7 0.855183 448 7 0.8575269 157 7 0.894671 242 7 0.8594687 278 6 0.8888609 166 7 0.870523 278 7 0.969925 76 5 0.8762967 250 7 0.8446691 137 4 0.887239 217 6 0.8637363 67 5 0.9154040 47 4 0.8049818 376 6 0.860323 223 6 0.813605 311 6 0.827308 94 5 0.8973386 122 6 0.899653 188 6 0.748347 93 6 0.8806043 71 5 0.8766875 309 6 0.831262 99 7 0.825229 143 6 0.8466948 203 6 0.897719 409 6 0.9279371 298 6 0.848852 379 7 0.8783357 284 7 0.7981859 94 6 0.844180 65 3 1.0000000 18 1 0.834240 224 6 0.8974703 310 7 0.9717333 273 5 0.9102086 272 6 0.8755656 236 6 0.9536123 295 5 0.901282 259 6 0.8908707 0.8448596 0.889661 0.9185458 0.8422027 0.8911752 0.8332201 0.9059871 0.8527269 0.9286522 0.948368 0.9462604 0.9385273 0.927051 0.8797816 0.9210076 0.9450824 0.87182877 0.8712979 0.9278311 0.8531866 0.9312823 0.936538 0.827986 0.9280497 0.9578856 0.850262 0.882681 0.8846987 0.9450228 0.9629168 0.876380 0.91694645 0.8334726 0.95079035 0.98757856 0.8856864 0.9467065 0.9631955 0.9583421 0.931097 0.9368774 0.9448646 4 0.8982240 0.9115081 -0.01904505 6 0.851787 0.871299 -0.01951195 0.994192 4.8089e-02 weaklyHypometh 1 1.0000e+00 insignificant 0.8424634 2.9076e-01 insignificant 1 1.0000e+00 insignificant 1.0997e-02 0.5106559 insignificant 1 insignificant 0.8982240 0.9135678 -0.02373260 6 0.851787 0.866217 -0.01443024 7.7394e-01 5.8682e-03 weaklyHypometh 1.0000e+00 3.4519e-01 insignificant 8.2781e-01 2.0043e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.00543580 8.6203e-01 insignificant 1.0000e+00 insignificant 0.898224 0.9438202 -0.0397591 6 0.851787 0.913823 -0.06203639 9.9988e-01 7.5643e-04 weaklyHypometh 1.0000e+00 6.3036e-02 weaklyHypometh 9.9855e-01 7.1389e-03 weaklyHypometh 1.0000e+00 3.5694e-01 insignificant -0.0525142 3.6118e-02 weaklyHypometh 0.5643445 insignificant 0.911508 0.9135678 -0.0048455 6 0.871299 0.866217 5.0817e-03 4.2074e-01 1.9468e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.4871e-01 5.1489e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0164328 6.2102e-01 insignificant 1.0000e+00 insignificant 0.9115081 0.9438202 -0.01910249 6 0.871299 0.913823 -0.04252444 9.8846e-01 6.4797e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9203e-01 0.01282208 weaklyHypometh 1.0000e+00 0.62189 insignificant -6.3511e-02 1.9195e-02 weaklyHypometh 0.548439 insignificant 0.9135678 0.943820 -0.01407551 6 0.866217 0.913823 -0.0476062 6.4619e-01 4.4970e-02 weaklyHypometh 1.0000e+00 2.8643e-01 insignificant 5.8541e-01 2.2689e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0470784 1.9898e-01 insignificant 1.0000e+00 insignificant chr16 22306050 22307050 48429 CDR2 ENSG00000140743 0.7235570 121 5 0.659151 82 5 0.7552083 41 3 0.6955357 113 5 0.644712 108 5 0.706122 23 3 0.5445781 65 5 0.821205 89 8 0.6481481 36 4 0.7743056 60 5 0.704927 113 8 0.793333 48 5 0.8031820 95 7 0.7965958 72 8 0.818452 29 3 0.5814394 44 3 0.6492308 77 3 0.7758418 147 7 0.552827 26 2 0.866667 15 3 0.812500 28 2 0.9000000 10 0 0.836853 105 5 0.883929 35 2 0.7733860 52 2 0.6833333 42 4 0.875893 39 4 0.786667 20 2 0.8614899 75 5 0.702273 62 8 0.7791667 36 5 0.730159 25 3 0.7777778 66 4 0.5307292 55 5 0.625000 34 2 0.5000000 14 0 0.714538 66 7 0.7393939 40 5 0.8357596 99 5 0.8631466 83 2 0.7588345 97 8 0.8110987 91 5 0.705298 94 8 0.7113615 0.7051922 0.761029 0.6972689 0.6525528 0.7988055 0.5801650 0.8318102 0.7254902 0.7769608 0.769272 0.7699879 0.7982638 0.813880 0.7934174 0.5387701 0.7276208 0.77584681 0.5402661 0.7964689 0.7990196 0.8734489 0.846619 0.880252 0.7709355 0.7941176 0.879202 0.771379 0.9069519 0.7771836 0.8039216 0.810884 0.78553922 0.5566176 0.65441176 0.53302696 0.7783676 0.7197471 0.8673959 0.8582657 0.787157 0.8014954 0.7103501 0 0.7475036 0.7939509 -0.03896410 3 0.744319 0.793594 -0.04927475 0.955869 2.2481e-02 lowCoverage 1 7.7521e-01 lowCoverage 0.9572730 2.1976e-03 lowCoverage 1 3.0407e-01 lowCoverage -8.6386e-02 0.0066925 lowCoverage 1 lowCoverage 0.7475036 0.6509091 0.11745364 2 0.744319 0.655320 0.08899917 2.0981e-05 9.8571e-01 lowCoverage 2.0370e-04 1.0000e+00 lowCoverage 6.0417e-03 9.6112e-01 lowCoverage 5.6436e-02 1.0000e+00 lowCoverage 0.06784448 2.2669e-01 lowCoverage 1.0000e+00 lowCoverage 0.747504 0.7823276 -0.0267299 5 0.744319 0.770349 -0.02602976 8.1812e-01 1.5922e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.6611e-01 1.3238e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0790764 5.0654e-02 lowCoverage 0.6665811 lowCoverage 0.793951 0.6509091 0.1487817 2 0.793594 0.655320 1.3827e-01 6.8648e-05 9.9906e-01 lowCoverage 6.5379e-04 1.0000e+00 lowCoverage 9.1939e-04 9.9976e-01 lowCoverage 1.2097e-02 1.0000e+00 lowCoverage 0.1542309 1.9534e-02 lowCoverage 2.2197e-01 lowCoverage 0.7939509 0.7823276 0.01635517 3 0.793594 0.770349 0.02324499 4.1612e-01 7.3199e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 4.0953e-01 0.92676840 lowCoverage 1.0000e+00 1.00000 lowCoverage 7.3100e-03 8.3978e-01 lowCoverage 1.000000 lowCoverage 0.6509091 0.782328 -0.13358537 2 0.655320 0.770349 -0.1150289 9.8767e-01 1.2996e-03 lowCoverage 1.0000e+00 1.3127e-02 lowCoverage 9.9716e-01 4.9070e-03 lowCoverage 1.0000e+00 6.2910e-02 lowCoverage -0.1469209 2.7700e-02 lowCoverage 3.1124e-01 lowCoverage chr16 22525750 22526750 48433 ENSG00000198064 0.7629195 364 12 0.612976 174 12 0.6926816 143 12 0.8870594 257 12 0.861722 77 8 0.737962 333 12 0.7873063 135 12 0.801065 181 11 0.7375697 127 8 0.8539298 141 12 0.821370 374 12 0.789435 83 7 0.8451782 223 12 0.7592593 31 2 0.695939 200 12 0.8460648 76 7 0.7225750 90 7 0.8965760 258 12 0.825514 171 12 0.791841 240 12 0.783333 26 1 0.8258021 103 12 0.918292 170 12 0.783333 47 3 0.8628739 80 12 0.8399415 262 12 0.829435 126 9 0.817687 63 6 0.8179026 177 12 0.841147 158 10 0.6792688 148 11 0.846073 400 12 0.8039502 101 9 0.7660533 165 12 0.709581 219 12 0.7495536 96 7 0.702058 104 11 0.6519752 252 12 0.8513350 399 12 0.8793467 396 12 0.8676059 348 12 0.8614542 300 12 0.816504 308 12 0.8469463 0.7592712 0.736106 0.9138018 0.8588170 0.8296113 0.8120457 0.7947606 0.8017660 0.8572966 0.883289 0.7878720 0.8583453 0.827843 0.7634860 0.8312174 0.7424852 0.90695885 0.8438072 0.8644497 0.8375540 0.8380879 0.890653 0.835352 0.8632637 0.8310884 0.801891 0.839675 0.8037201 0.8470708 0.7354913 0.844107 0.79931091 0.7421910 0.69881258 0.74395461 0.7834242 0.7732908 0.8184997 0.8766087 0.880521 0.8726565 0.8327990 4 0.8314301 0.8255682 0.00462394 12 0.768368 0.789667 -0.02129846 0.694674 6.3146e-01 insignificant 1 1.0000e+00 insignificant 0.9816904 2.3895e-01 insignificant 1 1.0000e+00 insignificant -3.3977e-02 0.1521462 insignificant 1 insignificant 0.8314729 0.7417289 0.08761715 12 0.760248 0.660005 0.10024276 2.7833e-06 9.9972e-01 weaklyHypermeth 2.9610e-05 1.0000e+00 weaklyHypermeth 6.1379e-03 9.9897e-01 weaklyHypermeth 5.6436e-02 1.0000e+00 weaklyHypermeth 0.05591863 6.4717e-02 insignificant 5.4384e-01 insignificant 0.832015 0.8772130 -0.0270634 12 0.797426 0.869237 -0.07181144 9.9002e-01 3.0690e-02 weaklyHypometh 1.0000e+00 5.5799e-01 insignificant 9.9884e-01 2.4177e-02 weaklyHypometh 1.0000e+00 5.4594e-01 insignificant -0.0688020 1.9634e-03 weaklyHypometh 0.0904993 weaklyHypometh 0.825939 0.7417289 0.0836938 12 0.825875 0.660005 1.6587e-01 5.0851e-05 1.0000e+00 weaklyHypermeth 4.9854e-04 1.0000e+00 weaklyHypermeth 2.4971e-03 1.0000e+00 weaklyHypermeth 2.6285e-02 1.0000e+00 weaklyHypermeth 0.0898956 7.6332e-03 weaklyHypermeth 1.1063e-01 insignificant 0.8255416 0.8772130 -0.02797057 12 0.801000 0.869237 -0.06823722 9.8730e-01 2.5398e-02 weaklyHypometh 1.0000e+00 7.6964e-01 insignificant 9.5217e-01 0.51729553 insignificant 1.0000e+00 1.00000 insignificant -3.4825e-02 9.6109e-02 insignificant 1.000000 insignificant 0.7422460 0.877213 -0.11120517 12 0.682863 0.869237 -0.1863746 1.0000e+00 5.7743e-07 weaklyHypometh 1.0000e+00 1.4084e-05 weaklyHypometh 1.0000e+00 6.7568e-04 weaklyHypometh 1.0000e+00 1.5714e-02 weaklyHypometh -0.1247206 1.2938e-03 weaklyHypometh 4.4614e-02 weaklyHypometh chr16 23992050 23993050 48474 PRKCB ENSG00000166501 0.5517512 97 5 0.828105 88 5 0.5060606 39 5 0.9003074 101 5 0.844444 34 3 0.833341 168 5 0.3866667 23 3 0.781748 112 5 0.5666667 36 5 0.8785714 33 4 0.888294 141 5 0.466667 11 0 0.8068627 125 5 0.8751515 47 5 0.752778 76 5 0.8000000 19 2 0.5000000 6 0 0.9146718 117 5 0.819669 112 5 0.931063 133 5 0.892308 43 5 0.7753968 72 5 0.579861 74 5 0.722222 25 2 0.9555556 27 2 0.7955805 81 5 0.727778 39 2 0.645833 21 2 0.8583333 58 5 0.862183 119 5 0.7934147 109 5 0.841068 148 5 0.6778345 56 5 0.7444444 59 5 0.595833 47 3 0.9000000 7 0 0.416807 78 5 0.8238095 96 5 0.8567947 79 5 0.7330356 117 6 0.6953947 83 5 0.7836364 71 5 0.795166 75 5 0.7975574 0.7421569 0.497159 0.8878458 0.8541667 0.7461047 0.3937500 0.8576222 0.5868056 0.8406250 0.871927 0.4375000 0.8189338 0.882955 0.7114583 0.8125000 0.6544896 0.87200772 0.8831918 0.8753361 0.8538462 0.9285714 0.744792 0.760417 0.9444444 0.8425420 0.809075 0.601562 0.8671875 0.8407895 0.8076373 0.786772 0.74382440 0.7408854 0.65670868 0.87500000 0.5019958 0.8318452 0.7824746 0.7746650 0.701275 0.7971591 0.7665855 0 0.8135705 0.8380368 -0.01352102 5 0.824310 0.737389 0.08692052 0.559550 8.2040e-01 insignificant 1 1.0000e+00 insignificant 0.6774568 6.2138e-01 insignificant 1 1.0000e+00 insignificant -4.5820e-02 0.3617440 lowCoverage 1 lowCoverage 0.8144947 0.6880466 0.11400138 5 0.851816 0.556807 0.29500900 6.7580e-03 1.0000e+00 weaklyHypermeth 4.3045e-02 1.0000e+00 weaklyHypermeth 6.3502e-02 9.7555e-01 insignificant 4.1235e-01 1.0000e+00 insignificant 0.04851954 5.6219e-01 lowCoverage 1.0000e+00 lowCoverage 0.813201 0.7905882 0.0399011 5 0.804789 0.828609 -0.02382047 4.8527e-02 7.8823e-01 weaklyHypermeth 6.9324e-01 1.0000e+00 insignificant 2.3557e-01 8.8444e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0311645 5.2076e-01 lowCoverage 1.0000000 lowCoverage 0.841191 0.6880466 0.1299821 5 0.784237 0.556807 2.2743e-01 4.8909e-04 9.9626e-01 weaklyHypermeth 4.3282e-03 1.0000e+00 weaklyHypermeth 1.2423e-02 9.8891e-01 weaklyHypermeth 1.0803e-01 1.0000e+00 insignificant 0.0943398 2.5894e-01 lowCoverage 1.0000e+00 lowCoverage 0.8397041 0.7905882 0.04898968 5 0.763766 0.828609 -0.06484327 7.5270e-02 8.5605e-01 insignificant 8.9607e-01 1.0000e+00 insignificant 1.2112e-01 0.91875359 insignificant 1.0000e+00 1.00000 insignificant 1.4656e-02 7.2812e-01 lowCoverage 1.000000 lowCoverage 0.6871345 0.789598 -0.06841324 5 0.493494 0.779641 -0.2861468 8.6324e-01 6.2778e-02 insignificant 1.0000e+00 3.6791e-01 insignificant 8.4901e-01 2.4238e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0796840 3.2961e-01 lowCoverage 1.0000e+00 lowCoverage chr16 27699850 27700850 48544 ENSG00000201371 0.8069928 440 14 0.667101 270 13 0.7913293 192 11 0.7305973 269 11 0.714057 258 14 0.800450 399 12 0.6428584 229 14 0.708392 235 13 0.6865842 106 10 0.7445286 136 13 0.798091 510 12 0.698411 106 7 0.7697580 221 13 0.7250261 175 14 0.774017 164 13 0.7869353 100 8 0.7356908 106 7 0.6667496 281 10 0.788602 209 8 0.695536 248 11 0.634216 148 10 0.8305195 70 6 0.789313 277 14 0.727729 166 11 0.7660616 194 7 0.7640981 383 15 0.668795 148 11 0.818182 66 5 0.7767435 189 11 0.827427 332 11 0.7597748 343 12 0.810527 376 11 0.6229787 266 13 0.5941071 194 10 0.511637 389 12 0.7083333 20 1 0.594676 311 13 0.7086607 330 11 0.7340234 486 15 0.7129445 514 14 0.6853585 381 13 0.4885085 254 9 0.700898 358 15 0.8099749 0.6752021 0.665727 0.7957779 0.7346946 0.8390299 0.6405359 0.8029762 0.7323005 0.7892863 0.797680 0.7782267 0.8355603 0.802919 0.7513360 0.7823966 0.7494365 0.74220538 0.8099624 0.8113738 0.8104414 0.8267592 0.796740 0.810875 0.7207562 0.7798895 0.713741 0.826006 0.7954151 0.8345756 0.7538978 0.845131 0.61171696 0.6480629 0.50714236 0.75001357 0.5798491 0.7710844 0.7030372 0.7275238 0.670334 0.5493297 0.7626865 4 0.7805245 0.8157504 -0.02885818 14 0.730680 0.710660 0.02001992 0.995543 1.1725e-02 weaklyHypometh 1 5.3296e-01 insignificant 0.9919776 2.0457e-01 insignificant 1 1.0000e+00 insignificant -2.7863e-02 0.2013334 insignificant 1 insignificant 0.7806452 0.5917826 0.16238346 11 0.745831 0.500379 0.24545226 1.1152e-08 9.9740e-01 weaklyHypermeth 1.4674e-07 1.0000e+00 weaklyHypermeth 1.0604e-03 9.8463e-01 weaklyHypermeth 1.2188e-02 1.0000e+00 weaklyHypermeth 0.11318657 1.2470e-02 weaklyHypermeth 1.5587e-01 insignificant 0.780456 0.7491219 0.0425925 13 0.705699 0.713739 -0.00804023 3.2300e-03 5.1674e-01 weaklyHypermeth 7.5117e-02 1.0000e+00 weaklyHypermeth 1.8474e-02 7.0692e-01 weaklyHypermeth 3.9308e-01 1.0000e+00 insignificant 0.0722389 1.8384e-01 insignificant 1.0000000 insignificant 0.816054 0.5921751 0.2072959 11 0.744501 0.524206 2.2029e-01 2.8522e-09 9.9999e-01 hypermethylated 4.9176e-08 1.0000e+00 hypermethylated 7.2276e-04 9.9987e-01 hypermethylated 1.0475e-02 1.0000e+00 hypermethylated 0.1410500 3.7803e-03 weaklyHypermeth 6.3005e-02 weaklyHypermeth 0.8159167 0.7491219 0.08642452 13 0.717606 0.713739 0.00386653 4.6692e-09 9.9454e-01 weaklyHypermeth 3.5917e-07 1.0000e+00 weaklyHypermeth 1.7593e-05 0.99048019 weaklyHypermeth 1.8601e-03 1.00000 weaklyHypermeth 1.0010e-01 8.8468e-02 insignificant 1.000000 insignificant 0.5929615 0.749122 -0.11569982 10 0.579386 0.713739 -0.1343534 7.9465e-01 2.7388e-02 weaklyHypometh 1.0000e+00 1.9153e-01 insignificant 8.3526e-01 3.2406e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0409477 4.7430e-01 insignificant 1.0000e+00 insignificant chr16 28721650 28722650 48560 ENSG00000196993 0.7312545 88 5 0.575542 54 5 0.7000000 45 5 0.7285714 43 4 0.626587 46 5 0.706016 66 5 0.6376679 50 5 0.708120 79 5 0.6157407 35 4 0.6391156 37 5 0.704134 119 5 0.666667 12 0 0.7788462 42 3 0.8020833 45 5 0.795094 51 5 0.3571429 11 0 0.5833333 10 0 0.7379149 100 5 0.814286 27 2 0.870130 44 5 0.791667 10 0 0.8333333 5 0 0.799242 67 5 0.780952 23 2 0.7404482 54 5 0.8000000 39 2 0.612937 33 2 0.250000 4 0 0.7611111 36 5 0.694892 64 5 0.6897436 46 5 0.642222 32 4 0.7350589 71 5 0.6355556 47 5 0.774043 73 5 0.6250000 8 0 0.672591 36 2 0.7196970 58 5 0.7843186 66 2 0.7218266 70 5 0.7772080 83 5 0.5631579 44 2 0.641667 64 5 0.7367921 0.5755289 0.698810 0.8700000 0.6763194 0.7002507 0.6939560 0.7123397 0.7305556 0.7882143 0.717049 0.6000000 0.8692308 0.743750 0.6979798 0.4875000 0.7457500 0.74579726 0.8187500 0.8935065 0.8137835 0.7561600 0.837121 0.783333 0.7763445 0.7950000 0.667089 0.315777 0.8475000 0.6792045 0.6695971 0.662222 0.70779672 0.6091667 0.68223039 0.65297601 0.5954837 0.6623106 0.7813937 0.7245808 0.780983 0.5315789 0.6406250 0 0.7141424 0.7215496 -0.00719216 2 0.675087 0.736236 -0.06114870 0.872846 4.9101e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.8454180 5.8420e-01 lowCoverage 1 1.0000e+00 lowCoverage -1.0800e-02 0.8370917 lowCoverage 1 lowCoverage 0.7131474 0.6518771 0.06620011 5 0.662130 0.781711 -0.11958138 2.0362e-02 6.2559e-01 weaklyHypermeth 1.2193e-01 1.0000e+00 insignificant 7.5257e-02 6.5565e-01 insignificant 4.7517e-01 1.0000e+00 insignificant -0.00474535 8.9278e-01 lowCoverage 1.0000e+00 lowCoverage 0.717791 0.7003058 0.0098140 5 0.725122 0.715929 0.00919269 3.2969e-01 1.7804e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.4497e-01 4.4147e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0087233 8.6378e-01 lowCoverage 1.0000000 lowCoverage 0.721550 0.6506849 0.0774663 2 0.736236 0.750527 -1.4291e-02 4.4326e-02 8.5395e-01 lowCoverage 2.3831e-01 1.0000e+00 lowCoverage 4.6467e-02 8.7553e-01 lowCoverage 3.1827e-01 1.0000e+00 lowCoverage 0.0060548 9.0766e-01 lowCoverage 1.0000e+00 lowCoverage 0.7241379 0.7003058 0.01362932 2 0.730730 0.715929 0.01480087 4.5018e-01 5.5142e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 2.5347e-01 0.59502569 lowCoverage 1.0000e+00 1.00000 lowCoverage 2.0769e-03 9.7379e-01 lowCoverage 1.000000 lowCoverage 0.6458333 0.700306 -0.06672435 5 0.650738 0.715929 -0.0651914 8.9447e-01 2.5923e-03 weaklyHypometh 1.0000e+00 2.4456e-02 weaklyHypometh 8.8948e-01 1.1642e-02 weaklyHypometh 1.0000e+00 1.2518e-01 insignificant -0.0039779 9.3724e-01 lowCoverage 1.0000e+00 lowCoverage chr16 28854050 28855050 48561 CD19 ENSG00000177455 0.8376623 69 5 0.583333 24 4 0.5625000 16 0 0.5910308 115 6 0.416667 16 0 0.562149 61 5 0.5000000 7 0 0.709752 74 4 0.3333333 12 0 0.5625000 16 0 0.861111 110 4 0.750000 12 0 0.8571429 28 4 0.7187500 32 4 0.691667 23 4 0.2500000 4 0 0.6666667 13 0 0.6970302 81 6 0.623810 37 5 0.511508 41 5 0.000000 1 0 0.8750000 8 0 0.849206 39 5 0.641667 23 4 0.5250000 17 3 0.6915966 92 5 0.783333 12 1 NA 0 0 0.5761905 26 3 0.687521 67 5 0.6107804 39 5 0.836630 76 6 0.7187500 32 4 0.3750000 24 4 0.593559 55 4 0.5555556 35 1 0.458333 17 2 0.7750000 63 5 0.7724868 81 5 0.7560578 108 6 0.7372039 143 6 0.9034392 72 1 0.817366 123 6 0.7222222 0.5925926 0.569444 0.4074074 0.3611111 0.5683761 0.5555556 0.7363261 0.3703704 0.5972222 0.777778 0.7222222 0.8571429 0.715278 0.7018519 0.2777778 0.6481481 0.75246914 0.6666667 0.6612654 NA 0.9166667 0.785714 0.668519 0.5277778 0.7450980 0.759259 NA 0.7447090 0.6396011 0.5995370 0.751781 0.72916667 0.3796296 0.64667277 0.50000000 0.4722222 0.5666667 0.6975309 0.7000000 0.665140 0.8611111 0.7288360 0 0.6940582 0.7343358 -0.02523494 5 0.667840 0.573996 0.09384338 0.751273 5.6623e-01 insignificant 1 1.0000e+00 insignificant 0.9506684 2.7302e-01 insignificant 1 1.0000e+00 insignificant -2.9026e-02 0.7279152 lowCoverage 1 lowCoverage 0.6933842 0.6415929 0.06296929 5 0.651320 0.686726 -0.03540602 1.8812e-01 9.2248e-01 insignificant 8.8321e-01 1.0000e+00 insignificant 5.4685e-01 9.1632e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03496428 6.3850e-01 lowCoverage 1.0000e+00 lowCoverage 0.695262 0.8197343 -0.0370729 5 0.687223 0.808504 -0.12128122 9.0567e-01 1.4947e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6184e-01 1.0323e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.1829801 1.1756e-03 lowCoverage 0.0734746 lowCoverage 0.738035 0.6415929 0.0991391 5 0.645746 0.686726 -4.0980e-02 4.9098e-02 9.9980e-01 weaklyHypermeth 2.6116e-01 1.0000e+00 insignificant 1.2658e-01 9.9590e-01 insignificant 7.1516e-01 1.0000e+00 insignificant 0.0639905 5.1512e-01 lowCoverage 1.0000e+00 lowCoverage 0.7398990 0.8197343 -0.00564636 5 0.737995 0.808504 -0.07050842 7.4125e-01 8.1306e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.7216e-01 0.61774614 insignificant 1.0000e+00 1.00000 insignificant -1.5395e-01 7.3961e-02 lowCoverage 1.000000 lowCoverage 0.6400000 0.819734 -0.10565862 5 0.641972 0.808504 -0.1665315 9.7608e-01 9.9035e-03 weaklyHypometh 1.0000e+00 8.0517e-02 weaklyHypometh 9.8969e-01 2.4486e-02 weaklyHypometh 1.0000e+00 2.3320e-01 insignificant -0.2179444 1.5307e-02 lowCoverage 2.2320e-01 lowCoverage chr16 29071650 29072650 48564 ENSG00000172533 0.7748305 376 9 0.880218 560 10 0.8052043 360 14 0.9278361 366 10 0.809649 318 12 0.778722 560 13 0.8319918 277 11 0.827443 299 8 0.8538790 368 12 0.8650192 362 11 0.880984 457 14 0.858956 217 6 0.8323349 431 11 0.7767558 292 10 0.808058 560 14 0.8426688 310 9 0.4423280 71 4 0.7836371 489 11 0.844832 502 13 0.837064 444 13 0.855715 187 13 0.7457341 174 9 0.909441 327 13 0.773374 246 11 0.7829615 243 13 0.8399103 480 12 0.848308 370 12 0.741667 277 11 0.8616767 558 14 0.750949 557 9 0.8575757 489 10 0.909709 440 12 0.8587668 401 11 0.7028775 269 11 0.786286 353 8 0.7648810 61 5 0.703616 348 13 0.8520280 557 16 0.8543665 484 10 0.8307643 386 11 0.8591109 290 9 0.7817494 339 7 0.881517 398 11 0.9097728 0.8794191 0.876472 0.9440319 0.8727226 0.9107184 0.8904470 0.8924926 0.8714208 0.9173565 0.883344 0.8748548 0.9103201 0.927377 0.9007426 0.9159704 0.8087715 0.91984271 0.9063537 0.9144638 0.8334394 0.8886400 0.911833 0.880549 0.8914128 0.9097813 0.868159 0.916107 0.8787259 0.9300754 0.9424505 0.908047 0.93064163 0.8846811 0.84882700 0.85022566 0.8646795 0.7978295 0.9232279 0.9149700 0.906889 0.9222181 0.9316534 6 0.8933877 0.8860497 -0.00049620 11 0.702027 0.794317 -0.09229063 0.793739 8.6375e-01 insignificant 1 1.0000e+00 insignificant 0.9974194 8.9489e-01 insignificant 1 1.0000e+00 insignificant -9.9644e-03 0.7227194 insignificant 1 insignificant 0.8939274 0.8596579 0.02509320 11 0.792058 0.723887 0.06817153 2.0348e-02 9.9150e-01 weaklyHypermeth 1.2193e-01 1.0000e+00 insignificant 5.5508e-01 9.9486e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03504471 3.4001e-01 insignificant 1.0000e+00 insignificant 0.894362 0.9214549 -0.0172589 9 0.797404 0.867716 -0.07031260 2.6376e-01 2.0391e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.2128e-01 3.0331e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0283809 3.1332e-01 insignificant 1.0000000 insignificant 0.885820 0.8587998 0.0249030 12 0.788997 0.665881 1.2312e-01 3.6625e-01 9.9536e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.8721e-01 9.9673e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0450091 2.0633e-01 insignificant 1.0000e+00 insignificant 0.8871452 0.9214549 -0.01494870 9 0.852172 0.867716 -0.01554423 8.8579e-01 5.2581e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.3127e-01 0.72984988 insignificant 1.0000e+00 1.00000 insignificant -1.8416e-02 4.6736e-01 insignificant 1.000000 insignificant 0.8600303 0.921414 -0.03944060 9 0.758300 0.860367 -0.1020677 8.9488e-01 1.6115e-01 insignificant 1.0000e+00 8.0174e-01 insignificant 9.5590e-01 2.8568e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0634256 8.8300e-02 insignificant 7.2976e-01 insignificant chr16 29075750 29076750 48565 ENSG00000172533 0.6129208 132 5 0.593416 158 4 0.4250000 34 4 0.7697833 109 3 0.425000 17 2 0.741733 124 5 0.4166667 33 3 0.557729 43 5 0.4695238 29 3 0.5541667 17 2 0.713868 140 5 0.500000 4 0 0.3064444 71 3 0.6250000 5 0 0.432381 25 4 0.5000000 6 1 0.5000000 37 1 0.4853333 100 5 0.536511 68 5 0.697454 107 4 0.696429 44 4 0.5157576 45 4 0.583636 44 4 0.545322 38 2 0.5613187 87 5 0.5004203 124 5 0.380000 25 3 0.196429 19 1 0.5237607 46 5 0.496110 148 5 0.5727519 148 5 0.559238 173 5 0.3534722 81 5 0.4258543 84 5 0.131321 78 3 0.2104762 84 5 0.493420 81 5 0.3999365 144 5 0.5204852 133 4 0.6818180 147 5 0.6663399 197 5 0.3717949 50 4 0.738320 121 5 0.7058897 0.7110414 0.430728 0.8405992 0.5831237 0.8165830 0.4433962 0.5099178 0.5953279 0.5666667 0.753550 0.6102021 0.3996855 0.458326 0.5121294 0.6374664 0.6374664 0.55446541 0.5699081 0.6809875 0.6320755 0.5433962 0.714580 0.629014 0.5655539 0.5431391 0.371069 0.157682 0.4628608 0.5174733 0.5767209 0.692363 0.39858491 0.3261456 0.13456746 0.27313567 0.4871355 0.3771488 0.6532065 0.7371959 0.770872 0.4460571 0.8257606 0 0.6115965 0.5536663 0.05447480 5 0.567879 0.541781 0.02609765 0.207519 8.5599e-01 insignificant 1 1.0000e+00 insignificant 0.2853020 7.4737e-01 insignificant 1 1.0000e+00 insignificant 3.2215e-02 0.4793714 lowCoverage 1 lowCoverage 0.6115965 0.3097826 0.30256466 5 0.567879 0.325305 0.24257365 4.4828e-09 9.9069e-01 hypermethylated 6.1409e-08 1.0000e+00 hypermethylated 4.6908e-05 9.9619e-01 hypermethylated 8.3765e-04 1.0000e+00 hypermethylated 0.20739983 1.1543e-02 lowCoverage 1.4798e-01 lowCoverage 0.611597 0.7145062 -0.0764328 5 0.567879 0.630366 -0.06248659 8.2220e-01 4.7401e-02 weaklyHypometh 1.0000e+00 7.5240e-01 insignificant 9.2651e-01 1.8698e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0526051 4.9497e-01 lowCoverage 1.0000000 lowCoverage 0.553666 0.3097826 0.2401042 5 0.541781 0.325305 2.1648e-01 1.3577e-07 9.9674e-01 hypermethylated 1.8858e-06 1.0000e+00 hypermethylated 9.6263e-04 9.9944e-01 hypermethylated 1.2502e-02 1.0000e+00 hypermethylated 0.1751844 2.6881e-02 lowCoverage 2.9219e-01 lowCoverage 0.5536663 0.7145062 -0.13088813 5 0.541781 0.630366 -0.08858424 9.0117e-01 4.4152e-03 weaklyHypometh 1.0000e+00 3.0950e-01 insignificant 7.5461e-01 0.03423904 weaklyHypometh 1.0000e+00 1.00000 insignificant -8.4820e-02 3.0098e-01 lowCoverage 1.000000 lowCoverage 0.3097826 0.714506 -0.38881960 5 0.325305 0.630366 -0.3050602 9.9809e-01 2.9747e-07 hypomethylated 1.0000e+00 7.6274e-06 hypomethylated 9.9552e-01 3.7993e-04 hypomethylated 1.0000e+00 1.0268e-02 hypomethylated -0.2600049 1.6665e-02 lowCoverage 2.3146e-01 lowCoverage chr16 29103250 29104250 48566 ENSG00000172533 0.9062843 1192 24 0.867110 824 26 0.8194637 598 26 0.9221081 1230 26 0.895835 384 23 0.834872 1414 26 0.8853891 500 23 0.887588 614 26 0.9058814 566 24 0.8631104 469 26 0.909866 1097 26 0.904635 256 16 0.8974663 716 26 0.8786197 227 14 0.892509 516 24 0.7851421 169 7 0.6967351 206 17 0.6764562 1306 24 0.888887 608 24 0.867123 1088 24 0.923296 377 23 0.8670426 494 26 0.877068 725 24 0.932201 400 24 0.8185728 431 25 0.8976018 935 26 0.866731 516 26 0.864419 245 13 0.9261906 666 24 0.874440 1012 26 0.9046788 945 26 0.920978 1208 26 0.7498349 645 25 0.6609426 651 24 0.771230 508 15 0.6264809 234 21 0.632405 483 25 0.5327533 1135 26 0.8012460 1013 26 0.8370135 1025 26 0.8556916 1171 26 0.8437828 1090 23 0.764348 939 26 0.9104584 0.8900455 0.803762 0.9229847 0.8994258 0.9074404 0.8847231 0.8996575 0.8965722 0.9213964 0.897998 0.9049612 0.9133721 0.896472 0.9002088 0.8517598 0.8105783 0.74296589 0.9202797 0.9025805 0.9232245 0.8786159 0.909575 0.926157 0.8645449 0.9045888 0.896290 0.935534 0.9295418 0.9103007 0.9177561 0.928052 0.74080585 0.6358801 0.76344651 0.64997801 0.7677987 0.4897769 0.8836296 0.8864332 0.894469 0.8911894 0.8331832 16 0.8777277 0.9005664 -0.02919401 26 0.835225 0.811735 0.02348970 0.999998 8.3430e-07 weaklyHypometh 1 2.7810e-04 weaklyHypometh 0.9992101 1.5373e-04 weaklyHypometh 1 3.0746e-02 weaklyHypometh -3.0181e-02 0.1049861 insignificant 1 insignificant 0.8776211 0.6326586 0.24784791 26 0.809302 0.570084 0.23921783 2.4200e-50 1.0000e+00 hypermethylated 2.2000e-48 1.0000e+00 hypermethylated 5.8925e-13 1.0000e+00 hypermethylated 3.6828e-11 1.0000e+00 hypermethylated 0.19697948 1.5253e-03 weaklyHypermeth 3.2454e-02 weaklyHypermeth 0.877972 0.8799160 0.0182209 26 0.817699 0.779309 0.03839089 5.1331e-04 7.0788e-01 weaklyHypermeth 1.5555e-02 1.0000e+00 weaklyHypermeth 2.7722e-02 9.7608e-01 weaklyHypermeth 5.1337e-01 1.0000e+00 insignificant 0.0388376 1.1143e-01 insignificant 1.0000000 insignificant 0.900756 0.6328317 0.2610614 26 0.858032 0.588474 2.6956e-01 1.0444e-50 1.0000e+00 hypermethylated 1.3055e-48 1.0000e+00 hypermethylated 9.9365e-17 1.0000e+00 hypermethylated 1.1041e-14 1.0000e+00 hypermethylated 0.2271604 1.0134e-03 weaklyHypermeth 2.4292e-02 weaklyHypermeth 0.9009077 0.8800840 0.05197436 26 0.886556 0.806181 0.08037429 1.4215e-09 9.9986e-01 weaklyHypermeth 1.7769e-07 1.0000e+00 weaklyHypermeth 8.4988e-05 0.99999419 weaklyHypermeth 6.0706e-03 1.00000 weaklyHypermeth 6.9019e-02 9.3160e-03 weaklyHypermeth 0.366880 insignificant 0.6331507 0.880061 -0.21866691 26 0.615810 0.799259 -0.1834492 9.9955e-01 1.9399e-20 hypomethylated 1.0000e+00 1.6166e-18 hypomethylated 9.9965e-01 1.8703e-07 hypomethylated 1.0000e+00 1.1689e-05 hypomethylated -0.1581418 5.1848e-03 weaklyHypometh 1.0802e-01 insignificant chr16 29179950 29180950 48567 ENSG00000196927 0.8866888 170 6 0.870078 140 6 0.5079359 127 8 0.7584965 120 5 0.593333 56 5 0.715651 168 6 0.9305556 44 2 0.903495 144 8 0.8364107 72 5 0.8806818 82 5 0.846481 176 8 0.269841 47 2 0.7388732 140 6 0.8205128 39 3 0.628756 77 5 0.9682540 43 2 0.5071429 90 4 0.5244920 331 6 0.875974 221 6 0.766273 150 6 0.922222 45 4 0.7895833 91 5 0.749916 91 8 0.821429 39 5 0.7928393 322 8 0.9125685 232 8 0.747186 83 6 0.564815 24 2 0.7626196 208 5 0.724610 237 8 0.8658213 225 6 0.850755 213 5 0.6306878 144 8 0.7138211 226 8 0.504093 139 5 0.6081349 90 5 0.366974 76 8 0.5542784 277 8 0.8014069 138 5 0.8469388 117 5 0.7761968 161 5 0.4751701 184 6 0.673292 81 5 0.8977803 0.9528360 0.771102 0.8408651 0.8747967 0.9098219 0.9542683 0.9453789 0.8767994 0.9593496 0.947642 0.6910569 0.9304496 0.911066 0.8479247 0.8920980 0.9269412 0.71452532 0.9394309 0.9391152 0.9821138 0.8101626 0.940997 0.908537 0.8490440 0.9495602 0.981262 0.923541 0.9602463 0.9224118 0.9489652 0.934906 0.85791715 0.8221359 0.71646341 0.64285714 0.7891986 0.6412691 0.8995222 0.8844367 0.792860 0.6040472 0.8608696 2 0.7825195 0.8678828 -0.07751074 5 0.626602 0.741019 -0.11441661 0.999991 1.2263e-03 weaklyHypometh 1 1.7349e-01 insignificant 0.9825915 3.9458e-02 weaklyHypometh 1 1.0000e+00 insignificant -5.0534e-02 0.3136900 insignificant 1 insignificant 0.7825195 0.5840336 0.22263996 5 0.626602 0.499735 0.12686680 1.7262e-06 7.4628e-01 hypermethylated 1.8969e-05 1.0000e+00 hypermethylated 1.7338e-04 8.4153e-01 hypermethylated 2.6357e-03 1.0000e+00 hypermethylated 0.17849823 1.4968e-02 weaklyHypermeth 1.7609e-01 insignificant 0.802193 0.7180617 0.1447619 5 0.750013 0.663543 0.08647070 3.6699e-04 1.7515e-01 weaklyHypermeth 1.1468e-02 1.0000e+00 weaklyHypermeth 9.3851e-03 7.5839e-01 weaklyHypermeth 2.3463e-01 1.0000e+00 insignificant 0.0268954 7.3921e-01 insignificant 1.0000000 insignificant 0.867883 0.5840336 0.3092541 6 0.741019 0.499735 2.4128e-01 3.2210e-17 9.8298e-01 hypermethylated 1.1107e-15 1.0000e+00 hypermethylated 3.6266e-07 9.0948e-01 hypermethylated 1.2506e-05 1.0000e+00 hypermethylated 0.2290324 3.2062e-03 weaklyHypermeth 5.6249e-02 weaklyHypermeth 0.8772422 0.7180617 0.21407979 5 0.854763 0.663543 0.19122062 2.7340e-13 6.8852e-01 hypermethylated 6.8349e-11 1.0000e+00 hypermethylated 1.6635e-05 0.67726249 hypermethylated 1.8601e-03 1.00000 hypermethylated 7.7430e-02 3.2660e-01 insignificant 1.000000 insignificant 0.5944206 0.718062 -0.08696959 5 0.590585 0.663543 -0.0729574 1.0862e-01 1.8251e-02 weaklyHypometh 1.0000e+00 1.3620e-01 insignificant 6.9479e-01 3.5099e-02 weaklyHypometh 1.0000e+00 2.9745e-01 insignificant -0.1516028 1.0414e-01 insignificant 8.1362e-01 insignificant chr16 29268050 29269050 48574 ENSG00000158527,ENSG00000198106 0.7079193 130 5 0.679789 108 5 0.6175641 51 5 0.5552665 119 5 0.700000 61 5 0.753609 161 5 0.5935847 39 5 0.690256 80 5 0.7507692 42 5 0.6583333 31 4 0.560774 155 5 0.500000 4 0 0.8227124 48 3 0.5450000 30 4 0.602857 56 5 0.3777778 19 1 0.8333333 4 0 0.8031262 111 5 0.755000 87 5 0.677135 120 5 0.733333 9 0 0.7083333 23 2 0.683916 61 5 0.795833 30 3 0.7250000 16 2 0.7206809 113 5 0.756190 24 2 0.742063 29 2 0.6866667 70 5 0.715185 123 5 0.7548770 147 5 0.802798 181 5 0.6176872 99 5 0.6476190 55 5 0.341442 93 5 0.5000000 10 0 0.589249 48 4 0.7222478 116 5 0.6568182 73 5 0.5567094 113 5 0.7477998 124 5 0.6123077 42 5 0.668355 87 5 0.7563946 0.7235088 0.646761 0.7319009 0.7368421 0.7053982 0.5390560 0.7098516 0.7233468 0.7713033 0.724615 0.6491228 0.7215342 0.521930 0.6528822 0.6023392 0.7520173 0.76988380 0.7226901 0.8000229 0.7368421 0.7514620 0.807386 0.750877 0.7543860 0.7283085 0.798496 0.753551 0.7222222 0.6856613 0.7126517 0.719640 0.60806181 0.7163743 0.56124056 0.73684211 0.5381042 0.7150709 0.6792929 0.6918578 0.763266 0.6828610 0.7476266 0 0.6806319 0.6949153 -0.00205366 5 0.707118 0.802756 -0.09563783 0.937091 1.6586e-01 insignificant 1 1.0000e+00 insignificant 0.9798562 1.9554e-01 insignificant 1 1.0000e+00 insignificant -7.6166e-02 0.0122407 lowCoverage 1 lowCoverage 0.6806319 0.5961995 0.09359699 5 0.707118 0.547516 0.15960192 1.2209e-03 9.9900e-01 weaklyHypermeth 8.8470e-03 1.0000e+00 weaklyHypermeth 5.2644e-02 9.9967e-01 insignificant 3.6366e-01 1.0000e+00 insignificant 0.08953294 1.7906e-01 lowCoverage 1.0000e+00 lowCoverage 0.679115 0.6605923 0.0149601 5 0.652009 0.681971 -0.02996214 4.7947e-01 7.1954e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.8577e-01 7.5660e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0108424 7.9662e-01 lowCoverage 1.0000000 lowCoverage 0.694915 0.5961995 0.0951409 5 0.802756 0.547516 2.5524e-01 6.8948e-03 1.0000e+00 weaklyHypermeth 4.5661e-02 1.0000e+00 weaklyHypermeth 2.9643e-02 9.9998e-01 weaklyHypermeth 2.1958e-01 1.0000e+00 insignificant 0.1656989 2.7875e-02 lowCoverage 2.9524e-01 lowCoverage 0.6930572 0.6605923 0.02047062 5 0.746401 0.681971 0.06442935 4.0343e-01 9.7757e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.6076e-01 0.95313907 insignificant 1.0000e+00 1.00000 insignificant 8.7008e-02 4.8590e-02 lowCoverage 0.848652 lowCoverage 0.5995204 0.660592 -0.07322525 5 0.632521 0.681971 -0.0494503 9.9248e-01 1.7432e-01 insignificant 1.0000e+00 8.6297e-01 insignificant 9.9627e-01 4.1040e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0786905 2.4769e-01 lowCoverage 1.0000e+00 lowCoverage chr16 29571050 29572050 48582 ENSG00000217794 0.7268775 113 5 0.691679 98 5 0.5965368 57 5 0.6098485 70 5 0.500000 30 5 0.733400 173 5 0.5714286 42 5 0.679409 81 5 0.9500000 17 0 0.7833333 24 1 0.745291 140 5 0.222222 5 0 0.5053052 57 5 0.6711111 49 5 0.657143 49 5 0.7333333 15 0 0.7000000 9 0 0.7564373 116 5 0.667435 54 5 0.796860 94 5 0.604762 17 1 0.5606061 27 2 0.742063 46 5 0.645714 38 5 0.6647619 32 5 0.7247118 78 5 0.828571 39 4 0.696429 14 1 0.7673333 73 5 0.781170 106 5 0.4857628 121 5 0.796497 176 5 0.6228355 82 5 0.5303030 59 5 0.619006 93 5 0.4000000 9 0 0.508503 36 1 0.6105159 92 5 0.7404762 71 5 0.8319795 98 5 0.8291667 77 5 0.8214286 36 5 0.775000 72 5 0.7254886 0.6465316 0.545707 0.6549348 0.5069444 0.7450819 0.6319444 0.7590481 0.9479167 0.7974537 0.768024 0.4469910 0.7158678 0.704630 0.6706349 0.7361111 0.6875000 0.76842489 0.7214755 0.7155983 0.6736111 0.5906987 0.715278 0.653968 0.6731481 0.7286967 0.851852 0.685637 0.7741204 0.7957599 0.6856841 0.771949 0.76530934 0.5451389 0.62871589 0.47222222 0.5451389 0.7230903 0.7448743 0.7933979 0.829514 0.7966270 0.7491319 0 0.7161640 0.7496741 -0.02563062 5 0.726746 0.725782 0.00096431 0.928179 3.7299e-01 insignificant 1 1.0000e+00 insignificant 0.6605448 3.7861e-01 insignificant 1 1.0000e+00 insignificant -2.6649e-02 0.5519720 lowCoverage 1 lowCoverage 0.7161640 0.6630728 0.05819049 5 0.726746 0.498248 0.22849809 4.5140e-02 9.9737e-01 weaklyHypermeth 2.3634e-01 1.0000e+00 insignificant 1.0845e-01 9.9866e-01 insignificant 6.2328e-01 1.0000e+00 insignificant 0.11635524 3.0589e-02 lowCoverage 3.1213e-01 lowCoverage 0.716164 0.7796610 -0.0791481 5 0.726746 0.860313 -0.13356749 9.9979e-01 1.2379e-02 weaklyHypometh 1.0000e+00 3.6017e-01 insignificant 9.9994e-01 1.5746e-02 weaklyHypometh 1.0000e+00 4.5086e-01 insignificant -0.1347277 1.5445e-03 lowCoverage 0.0874602 lowCoverage 0.749674 0.6630728 0.0838358 5 0.725782 0.498248 2.2753e-01 2.5072e-02 9.9859e-01 weaklyHypermeth 1.4835e-01 1.0000e+00 insignificant 7.4252e-02 9.9594e-01 insignificant 4.6119e-01 1.0000e+00 insignificant 0.1430046 9.8449e-03 lowCoverage 1.4064e-01 lowCoverage 0.7496741 0.7796610 -0.04979467 5 0.725782 0.860313 -0.13453180 9.9828e-01 1.6008e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9957e-01 0.09281533 insignificant 1.0000e+00 1.00000 insignificant -1.0808e-01 7.2508e-03 lowCoverage 0.345274 lowCoverage 0.6630728 0.779661 -0.13360374 5 0.498248 0.860313 -0.3620656 1.0000e+00 5.2110e-03 weaklyHypometh 1.0000e+00 4.5710e-02 weaklyHypometh 1.0000e+00 5.4205e-03 weaklyHypometh 1.0000e+00 6.8387e-02 weaklyHypometh -0.2510829 3.5434e-04 lowCoverage 1.6873e-02 lowCoverage chr16 29604750 29605750 48584 QPRT ENSG00000103485 0.7686738 197 6 0.672996 177 7 0.5137686 106 5 0.7730827 156 6 0.738271 66 5 0.717020 312 6 0.7208104 81 5 0.807856 147 6 0.7476077 86 6 0.6783069 66 6 0.718364 267 7 0.674282 45 3 0.6624167 122 6 0.9055556 35 4 0.793946 120 6 0.4700000 32 3 0.6297619 30 3 0.6395503 130 6 0.812950 166 6 0.759424 246 6 0.780849 78 6 0.7488248 93 6 0.718284 145 6 0.584907 109 7 0.8057961 127 5 0.6952769 224 6 0.728415 96 6 0.513116 72 5 0.6793171 139 6 0.741964 255 6 0.8213719 263 6 0.827525 316 6 0.6491170 141 6 0.6266602 119 6 0.629058 176 6 0.7143434 47 5 0.715640 120 6 0.7837705 232 6 0.6337987 124 6 0.7706168 183 6 0.7895665 141 6 0.6992864 131 5 0.798267 140 6 0.7523226 0.7241827 0.549192 0.7335139 0.7412166 0.7318491 0.7406607 0.7886608 0.7237081 0.7275926 0.751378 0.7268207 0.7322556 0.780892 0.7718348 0.5584760 0.6561248 0.76132275 0.8063845 0.7626398 0.7959038 0.7376286 0.716898 0.779553 0.7765825 0.7457855 0.666867 0.720889 0.8069011 0.7381053 0.7785188 0.774390 0.64212390 0.6701600 0.59861472 0.70561856 0.6745530 0.7202575 0.7500011 0.7756513 0.753381 0.7621894 0.8202776 4 0.7703016 0.7929056 -0.01588005 6 0.721297 0.669477 0.05181975 0.525353 3.0908e-01 insignificant 1 1.0000e+00 insignificant 0.6760309 4.9789e-01 insignificant 1 1.0000e+00 insignificant -1.0238e-02 0.7739172 insignificant 1 insignificant 0.7715953 0.7137725 0.06384111 6 0.756780 0.616653 0.14012608 7.8557e-05 9.9759e-01 weaklyHypermeth 6.9519e-04 1.0000e+00 weaklyHypermeth 4.6403e-03 9.7727e-01 weaklyHypermeth 4.5944e-02 1.0000e+00 weaklyHypermeth 0.02380053 4.9432e-01 insignificant 1.0000e+00 insignificant 0.771595 0.8080668 -0.0275456 6 0.756780 0.703207 0.05357246 1.0178e-01 9.8519e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 4.7140e-01 1.1965e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0280750 4.8606e-01 insignificant 1.0000000 insignificant 0.795168 0.7137725 0.0781739 6 0.724346 0.616653 1.0769e-01 3.8560e-05 9.9900e-01 weaklyHypermeth 3.8949e-04 1.0000e+00 weaklyHypermeth 2.2399e-03 9.6948e-01 weaklyHypermeth 2.4614e-02 1.0000e+00 weaklyHypermeth 0.0340389 3.7540e-01 insignificant 1.0000e+00 insignificant 0.7951681 0.8080668 -0.00577327 6 0.724346 0.703207 0.02113904 2.4247e-01 2.3339e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.9277e-01 0.48868619 insignificant 1.0000e+00 1.00000 insignificant -1.7837e-02 6.7655e-01 insignificant 1.000000 insignificant 0.7137725 0.808067 -0.08279068 6 0.616653 0.703207 -0.0865536 8.8110e-01 5.0251e-03 weaklyHypometh 1.0000e+00 4.4497e-02 weaklyHypometh 6.9621e-01 1.0124e-02 weaklyHypometh 1.0000e+00 1.1375e-01 insignificant -0.0518755 2.3425e-01 insignificant 1.0000e+00 insignificant chr16 29680950 29681950 48587 C16orf54 ENSG00000185905 0.7908087 244 9 0.703124 251 10 0.7120618 167 7 0.8793311 161 7 0.654040 93 6 0.712305 404 8 0.7115693 169 7 0.794634 180 9 0.7221945 90 5 0.8723064 107 6 0.776820 255 9 0.726190 50 4 0.8262080 148 7 0.8028083 48 3 0.692515 164 7 0.5562533 64 5 0.5888143 285 4 0.7676256 145 6 0.730915 218 8 0.708737 358 10 0.733333 68 5 0.6250000 19 1 0.721722 200 8 0.605613 91 6 0.6718679 88 5 0.7990643 325 10 0.835044 116 6 0.694004 74 4 0.7288828 200 7 0.777778 292 11 0.7991265 317 9 0.704120 383 11 0.4826582 226 11 0.5497713 123 7 0.672438 146 7 0.7472222 41 3 0.568757 213 5 0.7388131 321 10 0.8191869 317 8 0.7256360 367 7 0.7778364 175 6 0.7462996 222 5 0.802058 270 7 0.7664487 0.7065851 0.699670 0.8688938 0.8539790 0.8324846 0.7404281 0.7874771 0.8114502 0.7999208 0.862446 0.7930073 0.8441117 0.804126 0.8618722 0.6576412 0.8200968 0.70617864 0.7954069 0.8268377 0.7638138 0.7030968 0.848407 0.694007 0.7740477 0.7656872 0.801918 0.890355 0.8398813 0.8234003 0.8596876 0.798014 0.50974703 0.4779359 0.79821305 0.72367464 0.5519487 0.5532760 0.8386819 0.8084796 0.842593 0.8229778 0.8512491 4 0.8069444 0.8177635 -0.01501481 7 0.719189 0.719981 -0.00079202 0.724753 3.5944e-01 insignificant 1 1.0000e+00 insignificant 0.6469936 4.9531e-01 insignificant 1 1.0000e+00 insignificant 1.1833e-02 0.6686712 insignificant 1 insignificant 0.8089794 0.4841121 0.31039289 7 0.755312 0.591134 0.16417796 5.6151e-19 9.9780e-01 hypermethylated 1.6515e-17 1.0000e+00 hypermethylated 5.8794e-05 9.9593e-01 hypermethylated 1.0137e-03 1.0000e+00 hypermethylated 0.10985308 5.7248e-02 insignificant 4.9352e-01 insignificant 0.806944 0.8430792 -0.0337311 7 0.719189 0.797712 -0.07852312 9.5716e-01 1.5939e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.8963e-01 2.2794e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0377403 1.5523e-01 insignificant 1.0000000 insignificant 0.820453 0.4841121 0.3302750 5 0.752202 0.591134 1.6107e-01 1.4823e-12 9.9816e-01 hypermethylated 3.6152e-11 1.0000e+00 hypermethylated 9.0679e-04 9.8076e-01 hypermethylated 1.2090e-02 1.0000e+00 hypermethylated 0.0980196 8.3843e-02 insignificant 6.3040e-01 insignificant 0.8177635 0.8430792 -0.02460607 5 0.719981 0.797712 -0.07773110 8.6119e-01 8.7457e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6854e-01 0.24282407 insignificant 1.0000e+00 1.00000 insignificant -4.9574e-02 8.4879e-02 insignificant 1.000000 insignificant 0.4841121 0.842963 -0.37786053 7 0.591134 0.780855 -0.1897209 9.9565e-01 2.6467e-07 hypomethylated 1.0000e+00 6.9650e-06 hypomethylated 9.9932e-01 2.9688e-03 weaklyHypometh 1.0000e+00 4.2411e-02 weaklyHypometh -0.1475934 1.9352e-02 weaklyHypometh 2.4811e-01 insignificant chr16 29795550 29796550 48588 ENSG00000214725 0.1022550 1074 30 0.102315 1814 27 0.2424587 2216 30 0.2401787 869 23 0.127178 1334 29 0.166518 1507 28 0.0871742 1760 28 0.110671 1630 28 0.0941309 2164 28 0.1289610 2576 28 0.134433 1307 28 0.125299 2015 28 0.0750534 1755 28 0.1661976 1151 23 0.230571 2231 28 0.1026445 1801 28 0.1030001 954 22 0.1360195 1063 26 0.052683 1445 28 0.361309 908 30 0.230913 469 29 0.0391259 821 23 0.156047 1114 30 0.064096 1068 28 0.1641336 620 23 0.2589773 1891 30 0.073782 1668 29 0.148776 1037 28 0.0990421 1366 28 0.126388 2299 30 0.0675557 1949 30 0.099204 1311 30 0.0847940 1329 30 0.0087874 907 28 0.092146 1256 28 0.0903688 184 18 0.068102 1058 28 0.0877168 1588 30 0.1942454 1211 26 0.1372644 1161 28 0.0812677 860 26 0.1477091 872 26 0.141456 1023 26 0.1120273 0.1065238 0.246144 0.2225793 0.1502223 0.1499539 0.1041317 0.1193501 0.1231114 0.1178282 0.136198 0.1004967 0.0904497 0.179708 0.1733463 0.1227369 0.0994654 0.11151520 0.0535718 0.3881294 0.2898867 0.0500872 0.133466 0.072624 0.1716404 0.2502658 0.057708 0.123058 0.0865034 0.1147022 0.0583275 0.094090 0.09192555 0.0102695 0.05436947 0.09391978 0.0781520 0.0546999 0.1564991 0.1074495 0.083449 0.1288183 0.1412536 23 0.1385634 0.1207327 0.02224368 30 0.185815 0.132750 0.05306551 0.027188 9.9911e-01 weaklyHypermeth 1 1.0000e+00 insignificant 0.0034667 9.9994e-01 weaklyHypermeth 1 1.0000e+00 insignificant 1.7116e-02 0.5089434 insignificant 1 insignificant 0.1385361 0.0540968 0.08553441 30 0.161868 0.067632 0.09423600 1.5061e-24 1.0000e+00 weaklyHypermeth 6.0244e-23 1.0000e+00 weaklyHypermeth 3.9747e-22 1.0000e+00 weaklyHypermeth 5.6781e-20 1.0000e+00 weaklyHypermeth 0.07246672 2.5440e-03 weaklyHypermeth 4.4632e-02 weaklyHypermeth 0.138490 0.1180258 0.0153675 26 0.140735 0.156769 -0.01603350 1.9956e-02 9.7731e-01 weaklyHypermeth 3.4406e-01 1.0000e+00 insignificant 1.3537e-02 7.5971e-01 weaklyHypermeth 3.2230e-01 1.0000e+00 insignificant 0.0040641 8.7026e-01 insignificant 1.0000000 insignificant 0.120764 0.0540968 0.0641141 30 0.136654 0.067632 6.9022e-02 3.1294e-09 1.0000e+00 weaklyHypermeth 5.3041e-08 1.0000e+00 weaklyHypermeth 5.9316e-12 1.0000e+00 weaklyHypermeth 4.2369e-10 1.0000e+00 weaklyHypermeth 0.0553509 3.1943e-02 weaklyHypermeth 3.1627e-01 insignificant 0.1207615 0.1180258 -0.00851566 26 0.139987 0.156769 -0.01678224 6.9480e-01 8.3308e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 8.2318e-01 0.13011589 insignificant 1.0000e+00 1.00000 insignificant -1.3052e-02 6.3162e-01 insignificant 1.000000 insignificant 0.0541139 0.118026 -0.06615913 26 0.071859 0.156769 -0.0849092 1.0000e+00 6.4517e-12 weaklyHypometh 1.0000e+00 3.0722e-10 weaklyHypometh 1.0000e+00 1.6501e-08 weaklyHypometh 1.0000e+00 1.2693e-06 weaklyHypometh -0.0684026 1.6083e-02 weaklyHypometh 2.2975e-01 insignificant chr16 30319750 30320750 48592 ZNF48 ENSG00000180035 0.8250000 218 8 0.771581 200 8 0.5133721 199 7 0.8088609 95 8 0.660454 105 7 0.779129 353 8 0.7488506 137 7 0.704156 149 8 0.6914988 135 7 0.8706349 137 7 0.822642 183 8 0.744811 75 5 0.8695671 182 7 NA 0 0 0.712799 147 7 0.8189858 46 5 0.7763704 107 5 0.8021465 146 6 0.686040 129 6 0.824472 336 8 0.768403 87 7 0.7261452 106 8 0.719860 171 8 0.751668 70 5 0.8581495 54 4 0.7732888 190 8 0.792253 87 7 0.783670 105 7 0.7752057 141 8 0.824052 208 8 0.8355674 229 8 0.797369 411 8 0.5359986 235 8 0.7921856 82 6 0.621032 56 4 0.7630505 80 7 0.699640 93 7 0.5134881 200 8 0.8284354 153 8 0.8804314 154 8 0.7293688 140 6 0.8529453 190 6 0.800085 116 6 0.8196253 0.8323306 0.519299 0.8287882 0.7168609 0.7829089 0.7487055 0.7923839 0.6843292 0.8263362 0.863434 0.6852214 0.8263313 NA 0.8018511 0.7757561 0.7264356 0.77809406 0.6673216 0.8408650 0.7737705 0.6854569 0.730634 0.719794 0.8641996 0.8290551 0.870161 0.856883 0.7637734 0.8555302 0.8643916 0.833501 0.49329440 0.8051402 0.66372071 0.78237143 0.6857236 0.4225151 0.8627965 0.9030111 0.797193 0.8815706 0.8700053 5 0.7690809 0.8122647 -0.03836362 8 0.757032 0.790432 -0.03339956 0.990648 4.4079e-02 weaklyHypometh 1 1.0000e+00 insignificant 0.9526488 9.4614e-02 insignificant 1 1.0000e+00 insignificant -2.4257e-02 0.3003741 insignificant 1 insignificant 0.7690809 0.5991957 0.16969289 8 0.757032 0.607131 0.14990101 2.4000e-07 9.2774e-01 weaklyHypermeth 2.7907e-06 1.0000e+00 weaklyHypermeth 3.0721e-02 8.9467e-01 weaklyHypermeth 2.3451e-01 1.0000e+00 insignificant 0.10531336 8.1057e-02 insignificant 6.3824e-01 insignificant 0.769081 0.8419655 -0.0961341 6 0.757032 0.823999 -0.06696685 9.9472e-01 3.7929e-04 weaklyHypometh 1.0000e+00 4.7411e-02 weaklyHypometh 9.8815e-01 5.4642e-05 weaklyHypometh 1.0000e+00 1.3661e-02 weaklyHypometh -0.0587073 1.0329e-01 insignificant 1.0000000 insignificant 0.812265 0.5991957 0.2081177 8 0.790432 0.607131 1.8330e-01 1.8555e-08 9.9460e-01 hypermethylated 2.8546e-07 1.0000e+00 hypermethylated 3.6527e-03 9.9714e-01 weaklyHypermeth 3.6527e-02 1.0000e+00 weaklyHypermeth 0.1295701 4.0721e-02 weaklyHypermeth 3.7500e-01 insignificant 0.8122647 0.8419655 -0.05295894 6 0.790432 0.823999 -0.03356729 9.5657e-01 1.8705e-02 weaklyHypometh 1.0000e+00 6.8351e-01 insignificant 9.8929e-01 0.02368565 weaklyHypometh 1.0000e+00 0.91099 insignificant -3.4450e-02 2.7410e-01 insignificant 1.000000 insignificant 0.5991957 0.841965 -0.26399831 6 0.607131 0.823999 -0.2168679 9.9998e-01 4.1212e-06 hypomethylated 1.0000e+00 8.7684e-05 hypomethylated 9.9983e-01 5.3312e-04 hypomethylated 1.0000e+00 1.4029e-02 hypomethylated -0.1640206 1.7409e-02 weaklyHypometh 2.3848e-01 insignificant chr16 30820950 30821950 48600 CTF1 ENSG00000150281 0.0769127 1181 41 0.075555 1091 40 0.0985086 1730 41 0.0750411 1111 33 0.099207 1375 41 0.133239 1780 41 0.0701855 1785 41 0.068453 1045 40 0.0712416 1532 40 0.0810458 1907 41 0.082295 1534 41 0.070735 1688 41 0.0976705 1388 41 0.0040616 612 20 0.062829 2083 41 0.0700154 1454 39 0.0918392 943 30 0.1100672 1414 38 0.063017 1479 41 0.090571 1718 41 0.125867 581 36 0.1091548 616 27 0.118728 1442 40 0.075079 661 39 0.1167852 491 27 0.1012086 1609 41 0.064936 1558 38 0.078730 831 35 0.0613359 1169 40 0.081921 1556 41 0.1012848 1414 41 0.093957 1688 41 0.0767511 847 40 0.0426249 1218 39 0.100725 559 13 0.1466919 451 26 0.086602 763 34 0.1049103 1762 40 0.1229893 1777 38 0.1258422 1633 38 0.0685322 989 33 0.0901984 2307 34 0.099500 1255 38 0.0404102 0.0315969 0.025601 0.0354764 0.0321252 0.0418094 0.0309571 0.0289242 0.0294753 0.0356019 0.037166 0.0311613 0.0312522 0.029845 0.0278458 0.0312111 0.0345303 0.03501762 0.0251454 0.0371547 0.0428849 0.0388176 0.045311 0.032339 0.0333719 0.0315888 0.038827 0.032067 0.0291751 0.0260435 0.0277688 0.032688 0.02577838 0.0141417 0.00757810 0.03182081 0.0238211 0.0192264 0.0405578 0.0494650 0.033442 0.0368174 0.0317462 32 0.0386535 0.0504449 -0.00063708 40 0.140510 0.109911 0.03059904 0.981152 5.3047e-01 insignificant 1 1.0000e+00 insignificant 0.7951524 9.8681e-01 insignificant 1 1.0000e+00 insignificant -1.4458e-02 0.0962807 insignificant 1 insignificant 0.0386003 0.0325349 0.01284411 40 0.137307 0.112727 0.02458042 6.1355e-04 9.6288e-01 weaklyHypermeth 4.6836e-03 1.0000e+00 weaklyHypermeth 2.9586e-02 9.9863e-01 weaklyHypermeth 2.2759e-01 1.0000e+00 insignificant -0.01342622 4.0573e-01 insignificant 1.0000e+00 insignificant 0.038530 0.0343008 -0.0053621 34 0.098501 0.144958 -0.04645668 9.9876e-01 2.7920e-06 weaklyHypometh 1.0000e+00 9.3065e-04 weaklyHypometh 9.9931e-01 6.0362e-03 weaklyHypometh 1.0000e+00 3.5507e-01 insignificant -0.0217879 1.1723e-01 insignificant 1.0000000 insignificant 0.050518 0.0328630 0.0135927 40 0.111179 0.118110 -6.9315e-03 1.5095e-02 9.6092e-01 weaklyHypermeth 9.2042e-02 1.0000e+00 weaklyHypermeth 2.7348e-01 9.9286e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0010315 9.4838e-01 insignificant 1.0000e+00 insignificant 0.0504121 0.0344221 -0.00599952 34 0.096839 0.162408 -0.06556873 9.6941e-01 3.2676e-03 weaklyHypometh 1.0000e+00 2.9722e-01 insignificant 9.9937e-01 0.00339397 weaklyHypometh 1.0000e+00 0.36150 insignificant -7.3302e-03 5.7171e-01 insignificant 1.000000 insignificant 0.0323792 0.034179 -0.01853937 34 0.108131 0.134541 -0.0264103 1.0000e+00 6.6559e-04 weaklyHypometh 1.0000e+00 7.3142e-03 weaklyHypometh 1.0000e+00 5.6473e-02 insignificant 1.0000e+00 4.3109e-01 insignificant -0.0083616 6.4708e-01 insignificant 1.0000e+00 insignificant chr16 30916850 30917850 48601 HSD3B7 ENSG00000099377 0.6374893 382 10 0.476594 846 10 0.3876796 321 10 0.7591877 429 10 0.578705 147 8 0.700295 704 10 0.7480745 201 8 0.583112 355 10 0.5690532 297 10 0.5651010 193 10 0.655533 642 10 0.429907 77 6 0.3492279 300 9 0.7167299 246 8 0.492573 344 10 0.6469780 86 7 0.2638889 26 3 0.3819383 404 9 0.405901 588 10 0.673106 519 10 0.623929 205 9 0.4030181 146 7 0.718583 391 10 0.719753 235 10 0.5674163 184 10 0.4678952 757 10 0.468149 390 10 0.406712 154 7 0.6042505 495 10 0.526068 782 10 0.5062208 734 10 0.686300 646 10 0.2307447 463 10 0.1100504 271 10 0.071225 785 10 0.2518519 99 7 0.290283 496 10 0.1785019 628 10 0.7285599 431 10 0.6221876 407 10 0.5887474 298 10 0.6071352 282 10 0.667157 351 10 0.6600791 0.4421120 0.374435 0.7728648 0.5397223 0.6784923 0.6837117 0.6034964 0.5510091 0.5831392 0.674797 0.4070804 0.2918704 0.676455 0.4991352 0.6808865 0.4016139 0.39951199 0.4587111 0.6875018 0.6478925 0.4479687 0.729207 0.658157 0.5739993 0.5745126 0.435928 0.445191 0.6591843 0.5288636 0.5119851 0.696559 0.24481938 0.1272573 0.02968483 0.19442029 0.3123784 0.2201542 0.7287558 0.6145235 0.652644 0.6229212 0.7224906 7 0.5589643 0.5767878 -0.01635010 10 0.594444 0.524414 0.07002934 0.886233 1.5065e-01 insignificant 1 1.0000e+00 insignificant 0.5620746 5.0147e-01 insignificant 1 1.0000e+00 insignificant -7.1375e-03 0.8781133 insignificant 1 insignificant 0.5587780 0.1509847 0.40048571 10 0.553888 0.168262 0.38562613 1.1551e-36 1.0000e+00 hypermethylated 7.2196e-35 1.0000e+00 hypermethylated 6.3835e-20 1.0000e+00 hypermethylated 7.0928e-18 1.0000e+00 hypermethylated 0.36227757 1.8288e-06 hypermethylated 1.0782e-04 hypermethylated 0.558699 0.6625212 -0.1113053 10 0.503535 0.595303 -0.09176862 1.0000e+00 1.2500e-03 weaklyHypometh 1.0000e+00 8.6325e-02 weaklyHypometh 9.9999e-01 2.1530e-03 weaklyHypometh 1.0000e+00 1.6562e-01 insignificant -0.0917036 3.8187e-02 weaklyHypometh 0.5874985 insignificant 0.576901 0.1509847 0.4144456 10 0.576856 0.168262 4.0859e-01 4.2722e-35 1.0000e+00 hypermethylated 3.0516e-33 1.0000e+00 hypermethylated 1.2565e-18 1.0000e+00 hypermethylated 1.7951e-16 1.0000e+00 hypermethylated 0.3694151 3.0107e-06 hypermethylated 1.7710e-04 hypermethylated 0.5769005 0.6628959 -0.10627503 10 0.576856 0.654834 -0.07797775 9.9454e-01 1.6016e-04 weaklyHypometh 1.0000e+00 5.3388e-02 weaklyHypometh 9.9887e-01 0.00030488 weaklyHypometh 1.0000e+00 0.15244 insignificant -8.4566e-02 5.9302e-02 insignificant 0.923331 insignificant 0.1509847 0.662896 -0.52610068 10 0.168262 0.654834 -0.4865716 1.0000e+00 1.7576e-33 hypomethylated 1.0000e+00 3.5152e-31 hypomethylated 1.0000e+00 2.0005e-13 hypomethylated 1.0000e+00 3.3341e-11 hypomethylated -0.4539812 3.0398e-06 hypomethylated 4.3426e-04 hypomethylated chr16 31046850 31047850 48604 MYST1 ENSG00000103510 0.9545994 235 5 0.953277 129 5 0.9047619 87 5 0.9372468 289 5 0.827778 70 5 0.937767 299 5 0.9000000 57 5 0.916667 101 5 0.8557470 149 5 0.9532308 103 5 0.883105 188 5 0.813333 40 4 0.9565000 202 5 0.9436364 45 4 0.908172 107 5 0.3333333 14 1 1.0000000 18 0 0.9271921 342 5 0.947895 82 5 0.946136 245 5 0.750447 88 5 0.9483694 108 5 0.965506 130 5 0.953333 93 5 0.9277526 83 5 0.9359371 197 5 0.869297 142 5 0.921270 54 5 0.9494865 126 5 0.904884 216 5 0.9505633 126 5 0.951888 291 5 0.9689137 131 5 0.9033333 77 4 0.857143 157 4 0.9666667 25 4 0.973333 74 5 0.9556275 152 5 0.9523414 224 5 0.9703596 238 5 0.9576330 235 5 0.9591444 217 5 0.938776 212 5 0.9480918 0.9470884 0.897025 0.9311518 0.9045226 0.9283526 0.9386217 0.9388610 0.8601468 0.9730653 0.876481 0.9051926 0.9546985 0.924121 0.8784622 0.4137353 1.0000000 0.94117932 0.9523274 0.9519983 0.8930121 0.9558786 0.970931 0.967839 0.9337019 0.9462557 0.896049 0.909205 0.9463484 0.9208717 0.9595703 0.955985 0.96249307 0.9519263 0.94552285 0.95812395 0.9772194 0.9603795 0.9605359 0.9687887 0.971861 0.9592562 0.9585922 4 0.9246966 0.9364791 -0.01446410 5 0.919689 0.932783 -0.01309387 0.958686 1.5736e-01 insignificant 1 1.0000e+00 insignificant 0.6944278 5.3017e-01 insignificant 1 1.0000e+00 insignificant -2.9042e-02 0.4195638 lowCoverage 1 lowCoverage 0.9246966 0.9252033 -0.00353779 5 0.919689 0.920459 -0.00076968 4.5288e-01 4.1638e-03 weaklyHypometh 1.0000e+00 2.6024e-01 insignificant 9.4345e-01 9.0459e-03 weaklyHypometh 1.0000e+00 5.6537e-01 insignificant -0.04748405 2.0607e-01 lowCoverage 1.0000e+00 lowCoverage 0.924697 0.9662222 -0.0368977 5 0.919689 0.953252 -0.03356340 9.8388e-01 9.0981e-03 weaklyHypometh 1.0000e+00 3.1373e-01 insignificant 9.4650e-01 2.7988e-02 weaklyHypometh 1.0000e+00 5.8308e-01 insignificant -0.0656320 5.0019e-02 lowCoverage 0.6665811 lowCoverage 0.935913 0.9253247 0.0105745 5 0.777319 0.933716 -1.5640e-01 6.4405e-01 6.0767e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9910e-01 2.4837e-02 inconclusive 1.0000e+00 1.0000e+00 insignificant -0.0184417 4.8671e-01 lowCoverage 1.0000e+00 lowCoverage 0.9359129 0.9662522 -0.02202688 5 0.777319 0.961044 -0.18372460 9.7667e-01 5.1339e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8737e-01 0.05853527 insignificant 1.0000e+00 1.00000 insignificant -3.6590e-02 6.1704e-02 insignificant 0.923331 insignificant 0.9253247 0.966252 -0.02008561 5 0.933716 0.961044 -0.0273281 8.1896e-01 6.4305e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.5347e-01 9.7704e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0181479 3.9844e-01 lowCoverage 1.0000e+00 lowCoverage chr16 31119150 31120150 48607 FUS ENSG00000089280 0.5415013 199 6 0.576112 181 5 0.5262691 96 5 0.5283333 164 5 0.549301 61 4 0.544034 339 5 0.5848126 84 6 0.522166 116 6 0.4585859 89 6 0.5638889 56 5 0.515446 194 5 0.666667 32 4 0.4767144 86 5 0.5216184 55 6 0.585135 82 5 0.6111111 43 4 0.3530327 288 2 0.5467544 192 5 0.554876 179 4 0.490897 245 5 0.436508 54 4 0.5555556 27 3 0.573732 146 6 0.469246 64 4 0.6476190 19 2 0.4291929 170 6 0.534848 87 5 0.521708 55 3 0.5373377 172 5 0.489591 204 5 0.5131509 161 5 0.592003 229 5 0.4235972 161 5 0.3981619 93 4 0.583630 152 6 0.4166667 11 0 0.446925 112 5 0.5002137 179 5 0.6722674 151 6 0.5925307 221 5 0.5702750 188 5 0.6139352 155 4 0.533414 176 5 0.6810292 0.6425408 0.609135 0.6910050 0.7257249 0.7030648 0.6877984 0.6482581 0.6739150 0.6876466 0.709561 0.8432161 0.6626819 0.706427 0.6964326 0.7742522 0.6212856 0.73866917 0.6978116 0.6544799 0.5497727 0.6764241 0.777570 0.620214 0.7383944 0.6346323 0.657286 0.668947 0.7109161 0.6952803 0.6873595 0.733281 0.58487932 0.7014049 0.71567060 0.58040201 0.6202640 0.5336812 0.7857242 0.7545335 0.743717 0.8198057 0.7118195 4 0.7072995 0.7103746 0.00081758 5 0.529162 0.526557 0.00260509 0.722595 7.3505e-01 insignificant 1 1.0000e+00 insignificant 0.4564678 8.5498e-01 insignificant 1 1.0000e+00 insignificant 1.0822e-02 0.6456442 lowCoverage 1 lowCoverage 0.7072995 0.6553672 0.07396455 5 0.529162 0.498778 0.03038383 2.3429e-02 3.5870e-01 weaklyHypermeth 1.3543e-01 1.0000e+00 insignificant 5.8713e-02 6.9464e-01 insignificant 3.8712e-01 1.0000e+00 insignificant 0.07433040 4.8229e-02 lowCoverage 4.2306e-01 lowCoverage 0.707300 0.7878788 -0.0654521 5 0.529162 0.600891 -0.07172915 9.8931e-01 1.9086e-03 weaklyHypometh 1.0000e+00 1.1929e-01 insignificant 9.6258e-01 1.2624e-02 weaklyHypometh 1.0000e+00 4.0768e-01 insignificant -0.0606216 5.9040e-02 lowCoverage 0.7271278 lowCoverage 0.710375 0.6553672 0.0723798 5 0.526557 0.498778 2.7779e-02 7.4076e-02 7.8659e-01 insignificant 3.7988e-01 1.0000e+00 insignificant 4.2075e-01 8.3966e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0635087 9.1554e-02 lowCoverage 6.5866e-01 lowCoverage 0.7103746 0.7878788 -0.06776208 5 0.526557 0.600891 -0.07433424 9.3251e-01 2.5209e-03 weaklyHypometh 1.0000e+00 2.9722e-01 insignificant 9.8614e-01 0.00361504 weaklyHypometh 1.0000e+00 0.36150 insignificant -7.1443e-02 3.8061e-02 lowCoverage 0.731940 lowCoverage 0.6553672 0.787879 -0.14022477 5 0.498778 0.600891 -0.1021130 9.6215e-01 1.1976e-03 weaklyHypometh 1.0000e+00 1.2346e-02 weaklyHypometh 9.9012e-01 2.0048e-03 weaklyHypometh 1.0000e+00 3.4566e-02 weaklyHypometh -0.1349520 5.0832e-03 lowCoverage 1.0802e-01 lowCoverage chr16 32259450 32260450 48622 TP53TG3B ENSG00000180598 0.7457043 271 6 0.732169 180 6 0.6424739 192 5 0.8187425 324 5 0.812921 114 5 0.784013 517 6 0.6940413 140 5 0.727255 159 5 0.7814437 172 5 0.8400366 194 5 0.788728 255 6 0.583333 32 3 0.7291101 133 6 0.6190476 10 1 0.815752 128 6 0.7314815 24 2 0.7185194 80 5 0.7372795 512 6 0.885496 153 5 0.743083 324 6 0.785556 80 5 0.6993194 208 6 0.789033 185 6 0.791310 131 6 0.7468453 157 5 0.8989686 329 6 0.741116 109 6 0.755411 40 4 0.7571868 123 6 0.868936 309 5 0.8042736 314 5 0.790568 540 6 0.6392984 227 6 0.4483219 254 6 0.631061 108 4 0.6526455 72 6 0.680638 177 6 0.7523393 359 5 0.7174941 319 6 0.7727661 360 6 0.6672394 444 6 0.7927889 440 6 0.758329 644 5 0.7713164 0.7278141 0.642067 0.8068159 0.7946772 0.7585415 0.6554914 0.7581902 0.7497428 0.8026725 0.781870 0.6201413 0.7006380 0.671291 0.8048393 0.6692187 0.6091875 0.72387348 0.8592360 0.7389098 0.7843934 0.6676003 0.809517 0.767084 0.7592901 0.8587150 0.750227 0.768987 0.7343326 0.8188653 0.7862485 0.772742 0.57266135 0.4012420 0.52171768 0.57916877 0.6821284 0.6618073 0.6632140 0.7478993 0.603584 0.7596877 0.7062813 5 0.7866633 0.7976238 -0.02592822 6 0.762795 0.799317 -0.03652198 0.980625 2.8430e-02 weaklyHypometh 1 8.3618e-01 insignificant 0.9642843 1.8772e-01 insignificant 1 1.0000e+00 insignificant -3.9179e-02 0.0984526 lowCoverage 1 lowCoverage 0.7866633 0.5973266 0.15831154 5 0.762795 0.633316 0.12947815 3.3694e-10 6.9124e-01 weaklyHypermeth 5.4345e-09 1.0000e+00 weaklyHypermeth 1.3111e-05 7.5208e-01 weaklyHypermeth 2.6229e-04 1.0000e+00 weaklyHypermeth 0.11248090 4.0677e-02 lowCoverage 3.8016e-01 lowCoverage 0.786663 0.7471681 0.0396618 6 0.762795 0.744298 0.01849680 7.5380e-02 7.0931e-01 insignificant 9.4315e-01 1.0000e+00 insignificant 1.1229e-01 8.4833e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0048079 8.6678e-01 lowCoverage 1.0000000 lowCoverage 0.797624 0.5973266 0.2012779 5 0.799317 0.633316 1.6600e-01 2.2864e-10 9.9826e-01 hypermethylated 4.7633e-09 1.0000e+00 hypermethylated 1.5045e-06 9.6801e-01 hypermethylated 4.7014e-05 1.0000e+00 hypermethylated 0.1516598 1.2238e-02 weaklyHypermeth 1.6208e-01 insignificant 0.7976238 0.7471681 0.07248187 6 0.799317 0.744298 0.05501878 5.6676e-03 9.9743e-01 weaklyHypermeth 1.1567e-01 1.0000e+00 insignificant 4.9667e-02 0.94063811 weaklyHypermeth 8.4182e-01 1.00000 insignificant 4.3987e-02 1.4534e-01 insignificant 1.000000 insignificant 0.5973266 0.747168 -0.12935004 5 0.633316 0.744298 -0.1109814 8.4833e-01 6.3978e-04 weaklyHypometh 1.0000e+00 7.1087e-03 weaklyHypometh 9.6887e-01 2.3629e-03 weaklyHypometh 1.0000e+00 3.6284e-02 weaklyHypometh -0.1076730 5.2713e-02 insignificant 4.9564e-01 insignificant chr16 33041850 33042850 48628 ENSG00000214613 0.8050519 204 7 0.691084 247 7 0.5805035 94 6 0.8619290 202 7 0.699261 83 6 0.767879 477 7 0.7014696 133 6 0.701351 137 6 0.7671937 64 4 0.7515263 39 3 0.810753 291 7 0.916667 16 1 0.7750464 99 6 0.7452381 48 6 0.670190 93 6 0.6750000 21 2 0.8832055 141 2 0.7002689 221 7 0.838943 253 6 0.699422 288 7 0.808913 73 6 0.7018141 47 5 0.748902 122 6 0.778938 70 6 0.8928571 47 6 0.7636175 494 7 0.685981 103 6 0.747222 61 6 0.7793458 171 6 0.742916 325 7 0.7352283 292 7 0.814782 358 7 0.4841561 161 6 0.4858974 132 7 0.566041 383 6 0.6800000 15 1 0.560221 231 6 0.6808410 373 7 0.7323490 344 7 0.7997372 225 7 0.7519481 144 7 0.7875668 125 7 0.804090 194 7 0.7337579 0.5347137 0.472008 0.7916473 0.6074412 0.7178027 0.5262818 0.7487560 0.6696016 0.6640141 0.769380 0.9137931 0.7285043 0.675205 0.5502426 0.5971264 0.8339803 0.58727875 0.8028710 0.5604851 0.8409122 0.5706577 0.776777 0.740060 0.8609195 0.6674538 0.526624 0.796648 0.6292162 0.6450342 0.5907641 0.782481 0.36124678 0.3561561 0.48141899 0.39632922 0.4251782 0.5752491 0.6214780 0.6806034 0.657417 0.7160657 0.7249169 3 0.7105681 0.7078132 0.01929460 7 0.775357 0.757341 0.01801596 0.410610 9.3763e-01 insignificant 1 1.0000e+00 insignificant 0.6012697 7.0479e-01 insignificant 1 1.0000e+00 insignificant -1.4611e-02 0.5538925 insignificant 1 insignificant 0.7105681 0.4980695 0.23109285 6 0.775357 0.569908 0.20544842 8.1962e-13 1.0000e+00 hypermethylated 1.6392e-11 1.0000e+00 hypermethylated 1.7257e-06 1.0000e+00 hypermethylated 4.4249e-05 1.0000e+00 hypermethylated 0.17590643 2.5367e-03 weaklyHypermeth 4.4632e-02 weaklyHypermeth 0.710568 0.6618217 0.0361679 7 0.775357 0.772041 0.00331528 3.5290e-01 2.7502e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.6541e-01 5.1821e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0230391 3.3503e-01 insignificant 1.0000000 insignificant 0.707813 0.4980695 0.2053479 6 0.757341 0.569908 1.8743e-01 2.8747e-10 1.0000e+00 hypermethylated 5.8667e-09 1.0000e+00 hypermethylated 1.0708e-06 1.0000e+00 hypermethylated 3.4542e-05 1.0000e+00 hypermethylated 0.1905171 1.8366e-03 weaklyHypermeth 3.5320e-02 weaklyHypermeth 0.7078132 0.6618217 0.01662641 7 0.757341 0.772041 -0.01470067 6.1603e-01 9.9104e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 6.2434e-01 0.19558708 insignificant 1.0000e+00 1.00000 insignificant -8.4284e-03 6.9778e-01 insignificant 1.000000 insignificant 0.4980695 0.661822 -0.18783056 6 0.569908 0.772041 -0.2021331 1.0000e+00 1.6129e-09 weaklyHypometh 1.0000e+00 6.4515e-08 weaklyHypometh 1.0000e+00 1.2070e-05 weaklyHypometh 1.0000e+00 5.4863e-04 weaklyHypometh -0.1989455 1.6782e-03 weaklyHypometh 5.0853e-02 weaklyHypometh chr16 33061950 33062950 48630 ENSG00000214613 0.8272638 1619 41 0.714455 510 28 0.6980846 652 40 0.8724516 1685 41 0.747743 407 31 0.787163 2243 43 0.6926629 611 37 0.792575 627 34 0.7566197 759 40 0.8183530 986 40 0.790390 767 38 0.664289 469 37 0.7099244 749 35 0.8265252 368 20 0.645939 727 40 0.6726190 254 27 0.5949342 270 22 0.8352279 2440 40 0.787628 586 38 0.729687 947 45 0.641461 184 18 0.7108135 599 34 0.783419 970 34 0.740199 308 27 0.8043646 802 34 0.8037325 1462 45 0.718341 525 33 0.633462 243 20 0.7537456 600 36 0.747146 905 34 0.7537245 820 34 0.801053 1573 43 0.4113645 713 40 0.3798079 867 44 0.498989 1044 40 0.3636268 448 32 0.410320 566 36 0.4263738 1269 43 0.7997574 1951 41 0.8186881 1519 44 0.8033842 2091 40 0.8641603 2168 38 0.811575 2454 40 0.8289000 0.7506455 0.747975 0.8528570 0.7096524 0.8043406 0.6944029 0.7895118 0.7662464 0.8394419 0.769488 0.6775847 0.7149281 0.828648 0.7281685 0.6104429 0.6423760 0.82178841 0.7296365 0.7524015 0.7053745 0.7428435 0.789475 0.729814 0.7693326 0.8054545 0.728617 0.632453 0.7357763 0.7144230 0.7251917 0.786976 0.45359049 0.3871595 0.52048695 0.38856251 0.5018185 0.4250880 0.7826345 0.8414469 0.826095 0.8296008 0.8385191 16 0.8078904 0.7888765 0.02190304 34 0.741670 0.717545 0.02412556 0.029541 9.7653e-01 weaklyHypermeth 1 1.0000e+00 insignificant 0.7925950 8.5670e-01 insignificant 1 1.0000e+00 insignificant 7.2716e-03 0.7582023 insignificant 1 insignificant 0.8083310 0.4792091 0.34230521 39 0.792428 0.408126 0.38430259 1.4151e-194 1.0000e+00 hypermethylated 1.4151e-191 1.0000e+00 hypermethylated 2.2582e-63 1.0000e+00 hypermethylated 2.2582e-60 1.0000e+00 hypermethylated 0.33314661 6.1169e-09 hypermethylated 4.7053e-07 hypermethylated 0.808327 0.8530885 -0.0315132 40 0.783046 0.818448 -0.03540189 9.9997e-01 6.9109e-03 weaklyHypometh 1.0000e+00 2.6580e-01 insignificant 9.9882e-01 4.0434e-03 weaklyHypometh 1.0000e+00 2.5271e-01 insignificant -0.0712861 2.1071e-03 weaklyHypometh 0.0904993 weaklyHypometh 0.789685 0.4792091 0.3288033 34 0.781596 0.408126 3.7347e-01 1.4999e-122 1.0000e+00 hypermethylated 4.9997e-120 1.0000e+00 hypermethylated 1.3795e-51 1.0000e+00 hypermethylated 6.8973e-49 1.0000e+00 hypermethylated 0.3258750 1.9525e-08 hypermethylated 2.1695e-06 hypermethylated 0.7895794 0.8530885 -0.05370163 34 0.769138 0.818448 -0.04931003 1.0000e+00 3.8881e-05 weaklyHypometh 1.0000e+00 1.9440e-02 weaklyHypometh 9.8782e-01 0.00265164 weaklyHypometh 1.0000e+00 0.36150 insignificant -7.8558e-02 1.5709e-03 weaklyHypometh 0.157090 insignificant 0.4794772 0.853088 -0.37824196 39 0.410481 0.818448 -0.4079670 1.0000e+00 1.8203e-109 hypomethylated 1.0000e+00 9.1017e-107 hypomethylated 1.0000e+00 1.8554e-48 hypomethylated 1.0000e+00 1.8554e-45 hypomethylated -0.4044327 9.4514e-08 hypomethylated 3.1505e-05 hypomethylated chr16 45322750 45323750 48640 ORC6L ENSG00000091651 0.9080044 395 8 0.876711 204 8 0.8341498 300 8 0.8969192 425 8 0.970779 171 8 0.934748 566 8 0.9265077 279 8 0.888979 234 8 0.9206486 341 8 0.9169852 272 8 0.918479 337 8 0.887528 191 8 0.8966562 240 8 0.9290022 155 8 0.910181 273 8 0.7685685 210 7 0.8878758 161 6 0.8982193 549 8 0.925723 142 8 0.921934 366 8 0.950893 78 7 0.9273268 134 7 0.935106 244 8 0.897755 134 8 0.8018990 117 7 0.9453676 358 8 0.838640 137 8 0.918829 152 8 0.9045172 225 8 0.963075 270 8 0.9300278 259 8 0.924964 445 8 0.6210665 265 8 0.7463509 107 8 0.500000 103 2 0.8948317 58 4 0.663970 332 8 0.9020883 298 8 0.9245674 469 8 0.9703201 359 8 0.9081115 585 8 0.9045389 395 8 0.935833 414 8 0.9251999 0.8816712 0.858907 0.9104567 0.9659955 0.9315135 0.9177805 0.8944490 0.9199468 0.9064750 0.913047 0.8911106 0.9116788 0.932817 0.9054424 0.8977194 0.9095499 0.89692343 0.9491158 0.9291855 0.9568230 0.9064630 0.931987 0.903134 0.8655356 0.9416313 0.854894 0.945638 0.9200034 0.9591381 0.9437044 0.926433 0.61399507 0.8006136 0.76665616 0.91027350 0.7830527 0.9105228 0.9313618 0.9729833 0.921617 0.9003843 0.9190575 7 0.9111417 0.9244027 -0.01419362 8 0.907327 0.922069 -0.01474147 0.973391 3.2239e-02 weaklyHypometh 1 8.7131e-01 insignificant 0.9954606 1.2591e-02 weaklyHypometh 1 7.3712e-01 insignificant -1.0603e-02 0.5258600 insignificant 1 insignificant 0.9111417 0.7779690 0.13374477 8 0.907327 0.748052 0.15927482 6.8617e-16 9.9978e-01 weaklyHypermeth 1.5957e-14 1.0000e+00 weaklyHypermeth 6.6930e-05 9.6476e-01 weaklyHypermeth 1.1344e-03 1.0000e+00 weaklyHypermeth 0.17954540 3.8827e-02 weaklyHypermeth 3.6629e-01 insignificant 0.911142 0.9275428 -0.0156654 8 0.907327 0.929363 -0.02203568 9.4087e-01 3.5450e-02 weaklyHypometh 1.0000e+00 5.9344e-01 insignificant 9.6979e-01 6.7485e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0277442 9.6134e-02 insignificant 0.9998821 insignificant 0.924403 0.7779690 0.1479246 8 0.922069 0.748052 1.7402e-01 7.5595e-11 9.9996e-01 weaklyHypermeth 1.6799e-09 1.0000e+00 weaklyHypermeth 1.0200e-04 9.8397e-01 weaklyHypermeth 1.9244e-03 1.0000e+00 weaklyHypermeth 0.1901488 3.1548e-02 weaklyHypermeth 3.1548e-01 insignificant 0.9244027 0.9275428 -0.00289178 8 0.922069 0.929363 -0.00729421 7.4619e-01 6.1342e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.3491e-01 0.73912607 insignificant 1.0000e+00 1.00000 insignificant -1.7141e-02 3.5851e-01 insignificant 1.000000 insignificant 0.7779690 0.927543 -0.13190952 8 0.748052 0.929363 -0.1813105 9.9986e-01 1.6901e-05 weaklyHypometh 1.0000e+00 3.0180e-04 weaklyHypometh 9.9557e-01 2.1880e-03 weaklyHypometh 1.0000e+00 3.4883e-02 weaklyHypometh -0.2072896 2.3249e-02 weaklyHypometh 2.7992e-01 insignificant chr16 45486750 45487750 48644 GPT2 ENSG00000166123 0.7875016 148 5 0.734732 124 5 0.6351327 106 5 0.7642857 104 5 0.733492 46 3 0.716107 180 5 0.8163636 80 4 0.770713 83 5 0.7947899 74 3 0.7698653 76 5 0.844671 139 5 0.516667 46 4 0.8144357 98 5 NA 0 0 0.906054 82 5 0.4763889 40 2 0.8066667 57 4 0.6206252 128 5 0.878381 129 5 0.742026 153 5 0.723187 64 3 0.5702100 97 5 0.620909 109 5 0.763759 78 5 0.7811765 48 5 0.8180104 115 5 0.758500 90 5 0.723000 66 3 0.7647989 81 5 0.793284 116 5 0.8393815 131 5 0.880512 198 5 0.6984266 97 5 0.7370370 95 5 0.977853 190 5 0.5321970 37 2 0.805024 85 5 0.5785680 117 5 0.4755637 180 5 0.4583607 221 5 0.4994825 168 5 0.4881911 166 5 0.619521 166 5 0.8655773 0.7971300 0.746445 0.8916944 0.8400886 0.8533640 0.8572234 0.8309579 0.8370920 0.8216819 0.872389 0.7705426 0.8892353 NA 0.9411051 0.7342700 0.8957364 0.75541272 0.9062392 0.8302782 0.8052006 0.7715729 0.771304 0.861014 0.8167624 0.8794199 0.818109 0.803837 0.8419782 0.8905806 0.8826625 0.886122 0.81633050 0.8157992 0.96866155 0.72727273 0.8767734 0.7361689 0.7446067 0.7339538 0.746389 0.7538856 0.8146114 2 0.7997887 0.7887678 0.00266247 5 0.760815 0.757483 0.00333179 0.460418 7.6483e-01 insignificant 1 1.0000e+00 insignificant 0.5652098 3.4199e-01 insignificant 1 1.0000e+00 insignificant -9.4345e-03 0.7949376 lowCoverage 1 lowCoverage 0.7997887 0.7777778 0.01305919 5 0.760815 0.757553 0.00326179 4.8922e-01 6.5493e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.4587e-01 7.1885e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02210853 7.6386e-01 lowCoverage 1.0000e+00 lowCoverage 0.799789 0.5127636 0.1790456 5 0.760815 0.508391 0.25242336 1.3493e-12 6.2688e-02 weaklyHypermeth 2.1422e-10 9.3564e-01 weaklyHypermeth 6.8247e-05 9.6227e-02 weaklyHypermeth 5.6872e-03 1.0000e+00 weaklyHypermeth 0.2354025 6.5133e-05 lowCoverage 0.0130267 lowCoverage 0.788768 0.7777778 0.0091108 5 0.757483 0.757553 -7.0003e-05 6.3145e-01 4.7180e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.7877e-01 5.5249e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0315430 6.6864e-01 lowCoverage 1.0000e+00 lowCoverage 0.7887678 0.5127636 0.19543158 5 0.757483 0.508391 0.24909156 1.2577e-07 3.7583e-02 weaklyHypermeth 6.9872e-06 9.7043e-01 weaklyHypermeth 1.3679e-04 0.04110643 weaklyHypermeth 7.5996e-03 1.00000 weaklyHypermeth 2.4484e-01 6.6283e-05 lowCoverage 0.019754 lowCoverage 0.7777778 0.512764 0.19551586 5 0.757553 0.508391 0.2491616 6.1658e-04 4.3483e-02 weaklyHypermeth 4.5759e-02 2.7873e-01 weaklyHypermeth 9.2267e-04 2.6194e-01 weaklyHypermeth 1.3181e-01 1.0000e+00 insignificant 0.2132940 2.1514e-02 lowCoverage 2.6561e-01 lowCoverage chr16 48032650 48033650 48670 C16orf78 ENSG00000166152 0.2541086 391 9 0.115681 441 10 0.2954103 276 10 0.2881016 270 7 0.355781 279 10 0.484628 478 8 0.3034470 300 10 0.292760 247 10 0.2429410 284 10 0.3712920 199 10 0.412656 309 10 0.523690 113 9 0.1402239 256 10 0.3259427 100 7 0.311060 289 10 0.4525538 160 10 0.3472627 120 4 0.2240589 585 7 0.225805 523 10 0.242991 444 10 0.385158 144 10 0.3037037 17 1 0.414014 285 10 0.292268 164 10 0.0690476 47 4 0.2432693 408 10 0.258869 280 10 0.241254 143 9 0.3081154 338 10 0.141638 539 10 0.1804739 480 10 0.643221 384 10 0.1851305 314 10 0.4210535 547 10 0.050000 205 7 0.5000000 38 4 0.148913 272 10 0.5410563 422 10 0.3354249 513 8 0.3930767 428 8 0.3820505 401 7 0.4351892 502 7 0.363990 345 9 0.2655555 0.0630807 0.238419 0.2468276 0.2076588 0.4744488 0.2320685 0.2628867 0.1924740 0.3587487 0.302831 0.5338905 0.0825739 0.343111 0.2756079 0.4495048 0.2673459 0.23061396 0.1599439 0.1731842 0.3610843 0.3434686 0.372901 0.265979 0.1024022 0.2040731 0.274263 0.233596 0.2952648 0.0932202 0.1618992 0.607776 0.11161058 0.4306750 0.02219226 0.43848519 0.1687079 0.4850335 0.2864312 0.3228240 0.259072 0.2274890 0.3280888 7 0.2547855 0.2775713 -0.02639570 10 0.285217 0.300526 -0.01530913 0.810851 1.8963e-01 insignificant 1 1.0000e+00 insignificant 0.0974546 7.0055e-01 insignificant 1 1.0000e+00 insignificant 2.0434e-02 0.6786179 insignificant 1 insignificant 0.2548664 0.3097493 -0.06299586 10 0.304742 0.298740 0.00600202 7.8874e-01 6.9987e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 8.5289e-02 9.6328e-01 insignificant 5.1690e-01 1.0000e+00 insignificant 0.00282743 9.7518e-01 insignificant 1.0000e+00 insignificant 0.255112 0.2797075 -0.0320945 8 0.411705 0.468173 -0.05646783 9.8473e-01 3.4417e-03 weaklyHypometh 1.0000e+00 1.8916e-01 insignificant 9.9236e-01 2.5113e-02 weaklyHypometh 1.0000e+00 5.4594e-01 insignificant -0.0714266 2.1789e-02 weaklyHypometh 0.4064932 insignificant 0.277795 0.3095768 -0.0338987 10 0.364114 0.298740 6.5374e-02 7.9585e-01 4.5572e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.8378e-01 8.5248e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0176063 8.5628e-01 insignificant 1.0000e+00 insignificant 0.2777950 0.2787185 -0.00598425 8 0.364114 0.326023 0.03809177 8.1689e-01 5.0035e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 8.7985e-01 0.00764631 weaklyHypometh 1.0000e+00 0.50975 insignificant -9.1860e-02 6.3809e-02 insignificant 0.931174 insignificant 0.3094046 0.278921 0.03721370 8 0.273845 0.340521 -0.0666753 8.8827e-01 4.7257e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9990e-01 1.1225e-01 insignificant 1.0000e+00 7.2422e-01 insignificant -0.0742540 4.2194e-01 insignificant 1.0000e+00 insignificant chr16 48090150 48091150 48671 C16orf78 ENSG00000166152 0.9214034 238 5 0.854900 179 3 0.7721084 151 4 0.8668963 210 6 0.802778 65 4 0.924094 253 6 0.8805368 161 4 0.795216 159 4 0.8403218 176 5 0.8823232 127 3 0.824592 161 5 0.769612 76 3 0.8545918 122 3 0.7500000 7 0 0.697807 127 4 0.8944444 35 3 0.8008333 121 3 0.5213219 188 5 0.811223 99 3 0.785707 207 5 0.842857 65 4 0.6232906 80 3 0.574398 121 4 0.568028 73 4 0.8571429 49 3 0.8418570 252 6 0.846959 80 4 0.922222 64 4 0.9007310 133 3 0.839769 293 4 0.7406372 258 5 0.941969 220 5 0.3116597 242 5 0.2872858 139 5 0.550420 195 4 0.3290598 37 3 0.622715 71 5 0.0886362 336 6 0.6815332 263 6 0.6681430 319 5 0.6194916 367 6 0.7205236 310 4 0.521387 295 6 0.8474814 0.7648442 0.797841 0.8275712 0.7818044 0.8348313 0.8565245 0.7968888 0.8029693 0.8414906 0.850865 0.7761023 0.8133684 0.810966 0.8088361 0.8661998 0.7980725 0.66933753 0.9178932 0.8596713 0.9075630 0.6602313 0.920153 0.758683 0.8850540 0.8906235 0.817687 0.875584 0.8395739 0.8482537 0.8377550 0.919111 0.24220571 0.2345048 0.71817117 0.31419414 0.7161444 0.0638168 0.7023644 0.6554157 0.626271 0.6272097 0.5272939 3 0.8201540 0.8493476 -0.03113571 4 0.775470 0.807364 -0.03189478 0.785338 5.4084e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.9463876 6.6734e-01 lowCoverage 1 1.0000e+00 lowCoverage 2.0880e-02 0.6362157 lowCoverage 1 lowCoverage 0.8204410 0.3107843 0.49930852 5 0.872403 0.216028 0.65637517 5.1282e-23 1.0000e+00 hypermethylated 1.9724e-21 1.0000e+00 hypermethylated 4.5423e-10 1.0000e+00 hypermethylated 2.1630e-08 1.0000e+00 hypermethylated 0.44757292 1.8448e-03 lowCoverage 3.8433e-02 lowCoverage 0.820441 0.6068211 0.1940386 5 0.872403 0.646173 0.22623040 3.7348e-13 9.9257e-01 weaklyHypermeth 9.3370e-11 1.0000e+00 weaklyHypermeth 1.0531e-07 9.9837e-01 weaklyHypermeth 1.7552e-05 1.0000e+00 weaklyHypermeth 0.1703199 3.5458e-03 lowCoverage 0.1108068 lowCoverage 0.849762 0.3107843 0.5313289 4 0.845785 0.216028 6.2976e-01 6.4369e-14 1.0000e+00 lowCoverage 1.7397e-12 1.0000e+00 lowCoverage 7.8102e-08 1.0000e+00 lowCoverage 3.0078e-06 1.0000e+00 lowCoverage 0.4266925 1.5447e-03 lowCoverage 3.1525e-02 lowCoverage 0.8497625 0.6068211 0.22664762 4 0.845785 0.646173 0.19961203 3.2218e-09 9.9903e-01 lowCoverage 3.3038e-07 1.0000e+00 lowCoverage 1.8601e-05 0.99385019 lowCoverage 1.8601e-03 1.00000 lowCoverage 1.4944e-01 1.2349e-02 lowCoverage 0.425841 lowCoverage 0.3107843 0.606821 -0.30762564 5 0.216028 0.646173 -0.4301448 1.0000e+00 4.9180e-06 hypomethylated 1.0000e+00 9.8360e-05 hypomethylated 9.9999e-01 1.7688e-03 weaklyHypometh 1.0000e+00 3.1585e-02 weaklyHypometh -0.2772531 1.5401e-02 lowCoverage 2.2320e-01 lowCoverage chr16 48193350 48194350 48683 C16orf78 ENSG00000166152 0.7837010 256 6 0.686944 184 6 0.7477152 102 6 0.8585636 181 6 0.652040 59 6 0.742465 407 6 0.6646104 113 6 0.659551 154 6 0.7724090 64 6 0.7103785 55 6 0.822559 223 6 0.821429 21 2 0.7083333 56 5 0.7956349 53 6 0.748893 87 6 0.9523810 21 3 NA 0 0 0.5641117 216 6 0.772094 181 6 0.808438 328 6 0.719246 67 6 0.6666667 5 0 0.880985 92 6 0.397007 120 6 0.7666667 43 3 0.5539216 154 6 0.672411 148 6 0.867788 49 3 0.6283310 173 6 0.581183 124 6 0.5591703 182 6 0.887802 285 6 0.4582368 169 6 0.2643652 193 6 0.499455 194 6 0.6000000 13 2 0.245225 192 6 0.4850338 313 6 0.6344923 327 6 0.6075666 242 6 0.7184753 274 6 0.6949311 162 6 0.543631 192 6 0.7111165 0.7150921 0.757371 0.8352254 0.6646148 0.8525820 0.6574575 0.6192514 0.7611231 0.7090354 0.827351 0.7801772 0.6834625 0.783638 0.7289874 0.9111982 NA 0.50326936 0.7180649 0.7346413 0.6624216 0.6462338 0.788504 0.371142 0.5872226 0.6459948 0.808418 0.806251 0.7597911 0.6381002 0.5930449 0.838549 0.36221155 0.2167934 0.37351168 0.29256019 0.2991815 0.3762247 0.5981607 0.5281666 0.605669 0.5721882 0.5067644 2 0.7562477 0.7392510 0.01552511 6 0.741624 0.673735 0.06788858 0.393485 8.3046e-01 insignificant 1 1.0000e+00 insignificant 0.7774526 5.5352e-01 insignificant 1 1.0000e+00 insignificant 6.9406e-02 0.1679084 insignificant 1 insignificant 0.7564335 0.4310987 0.36883972 6 0.771827 0.312997 0.45883038 7.6670e-19 1.0000e+00 hypermethylated 2.1906e-17 1.0000e+00 hypermethylated 2.3871e-08 1.0000e+00 hypermethylated 8.5255e-07 1.0000e+00 hypermethylated 0.32578514 1.5125e-03 weaklyHypermeth 3.2454e-02 weaklyHypermeth 0.756531 0.6204013 0.1431282 6 0.759327 0.596734 0.16259274 8.6925e-06 8.3701e-01 weaklyHypermeth 3.9690e-04 1.0000e+00 weaklyHypermeth 6.1149e-04 9.2989e-01 weaklyHypermeth 3.2184e-02 1.0000e+00 weaklyHypermeth 0.1113519 1.7941e-02 weaklyHypermeth 0.3747492 insignificant 0.741643 0.4310987 0.3527625 6 0.737119 0.312997 4.2412e-01 5.2127e-10 9.9998e-01 hypermethylated 1.0221e-08 1.0000e+00 hypermethylated 8.8027e-06 9.9999e-01 hypermethylated 2.1470e-04 1.0000e+00 hypermethylated 0.2563789 4.6466e-03 weaklyHypermeth 7.2604e-02 weaklyHypermeth 0.7407666 0.6204013 0.12212066 6 0.704381 0.596734 0.10764666 7.4081e-03 9.4302e-01 weaklyHypermeth 1.4526e-01 1.0000e+00 insignificant 9.9650e-02 0.99815349 insignificant 1.0000e+00 1.00000 insignificant 4.1946e-02 4.4690e-01 insignificant 1.000000 insignificant 0.4319030 0.620921 -0.19958998 6 0.357710 0.681982 -0.3242716 9.9996e-01 1.4288e-06 weaklyHypometh 1.0000e+00 3.2473e-05 weaklyHypometh 9.9996e-01 1.3084e-04 weaklyHypometh 1.0000e+00 4.5087e-03 weaklyHypometh -0.2144332 1.2102e-02 weaklyHypometh 1.8909e-01 insignificant chr16 48231350 48232350 48688 C16orf78 ENSG00000166152 0.8173927 303 7 0.769460 255 7 0.8558871 183 7 0.8497574 147 7 0.865953 105 7 0.861468 267 7 0.7901734 245 7 0.726549 251 7 0.7211610 259 7 0.7101363 245 7 0.875574 328 7 0.622712 168 6 0.4898459 331 7 0.7745098 20 1 0.563144 234 7 0.5164516 194 7 0.5396799 109 7 0.6917842 161 7 0.731735 313 7 0.824100 240 7 0.772920 103 7 0.6286565 90 7 0.905521 266 7 0.832145 91 7 0.8944444 53 5 0.8106730 330 7 0.769929 193 7 0.945918 77 6 0.7036351 267 7 0.760508 413 7 0.8749365 289 7 0.862102 337 7 0.2261045 273 7 0.4834913 293 7 0.333333 62 2 0.2550717 96 4 0.541893 132 7 0.6940767 306 7 0.4917060 219 7 0.5551845 271 7 0.5534864 216 7 0.6381107 275 7 0.479718 169 7 0.8055011 0.7687337 0.852372 0.8165255 0.8739340 0.8561870 0.7715235 0.7279195 0.7136944 0.7234467 0.869372 0.6188198 0.5113909 0.739958 0.5748601 0.5259563 0.5321386 0.67049699 0.7438025 0.8013886 0.7592485 0.5968022 0.902689 0.802276 0.8633371 0.8056857 0.785756 0.920466 0.7046279 0.7653200 0.8634871 0.862050 0.20438231 0.5086861 0.45457225 0.23805864 0.5197248 0.6362054 0.4697481 0.5428216 0.549585 0.6372055 0.4561578 7 0.7097292 0.8126744 -0.08868263 7 0.707411 0.811675 -0.10426415 0.998742 7.6186e-05 weaklyHypometh 1 1.5237e-02 weaklyHypometh 0.9989854 6.6112e-03 weaklyHypometh 1 5.0855e-01 insignificant -8.3575e-02 0.0371600 weaklyHypometh 1 insignificant 0.7097292 0.4716007 0.25996573 7 0.707411 0.460221 0.24718971 6.3931e-16 9.9998e-01 hypermethylated 1.5222e-14 1.0000e+00 hypermethylated 8.4131e-07 9.9999e-01 hypermethylated 2.4744e-05 1.0000e+00 hypermethylated 0.30754524 7.1753e-03 weaklyHypermeth 1.0106e-01 insignificant 0.709729 0.5460870 0.1665725 7 0.707411 0.555979 0.15143236 1.4995e-12 9.8188e-01 weaklyHypermeth 2.1422e-10 1.0000e+00 weaklyHypermeth 5.4199e-09 9.9989e-01 weaklyHypermeth 2.7100e-06 1.0000e+00 weaklyHypermeth 0.1862327 4.1771e-04 weaklyHypermeth 0.0522134 weaklyHypermeth 0.812674 0.4716007 0.3411878 7 0.811675 0.460221 3.5145e-01 1.2064e-20 1.0000e+00 hypermethylated 5.2452e-19 1.0000e+00 hypermethylated 8.3825e-09 1.0000e+00 hypermethylated 4.1913e-07 1.0000e+00 hypermethylated 0.3911205 2.2520e-03 weaklyHypermeth 4.1703e-02 weaklyHypermeth 0.8126744 0.5460870 0.26292397 7 0.811675 0.555979 0.25569651 1.0421e-19 1.0000e+00 hypermethylated 5.2104e-17 1.0000e+00 hypermethylated 5.4583e-12 1.00000000 hypermethylated 2.7292e-09 1.00000 hypermethylated 2.6981e-01 2.3348e-05 hypermethylated 0.014889 hypermethylated 0.4716007 0.546087 -0.08596224 7 0.460221 0.555979 -0.0957574 8.9420e-01 1.9775e-04 weaklyHypometh 1.0000e+00 2.5682e-03 weaklyHypometh 9.8396e-01 2.6768e-02 weaklyHypometh 1.0000e+00 2.4785e-01 insignificant -0.1213125 1.7555e-01 insignificant 1.0000e+00 insignificant chr16 48289250 48290250 48692 ENSG00000221134 0.3988706 763 16 0.287768 374 13 0.4912345 322 13 0.4600272 423 15 0.378137 197 9 0.670188 473 15 0.4403080 295 16 0.495018 250 16 0.4279082 252 13 0.5618908 197 7 0.486596 427 16 0.322547 253 13 0.6691581 228 11 0.7727273 103 4 0.631662 244 7 0.2682948 136 7 0.1337407 150 5 0.3716525 1383 14 0.160095 646 16 0.523981 492 16 0.667743 152 13 0.3661226 218 11 0.653438 275 16 0.648337 163 7 0.4848120 185 12 0.5033363 404 10 0.550926 237 12 0.369911 80 7 0.6123733 482 13 0.780339 407 16 0.7034164 372 10 0.502870 513 16 0.9491509 197 10 0.9132845 480 10 1.000000 92 5 0.9275641 65 9 0.733872 71 6 0.7767098 451 16 0.2402062 641 16 0.4267500 553 16 0.3418499 965 16 0.3384643 721 16 0.180269 616 16 0.4123797 0.3600448 0.455260 0.4384400 0.4890297 0.6480566 0.4566761 0.5041891 0.3939335 0.5771985 0.519863 0.2613848 0.6140702 0.405996 0.5310821 0.2096089 0.2835235 0.32844656 0.2042133 0.5324343 0.6112867 0.3613717 0.677772 0.651850 0.6126790 0.6219521 0.507564 0.629902 0.5711955 0.7458614 0.7167869 0.443802 0.91213891 0.9024278 0.90812283 0.93065961 0.8067187 0.8346482 0.1743848 0.3696988 0.324619 0.2587935 0.1510707 5 0.4248521 0.6084960 -0.18313796 16 0.510934 0.571854 -0.06091984 1.000000 1.3952e-15 weaklyHypometh 1 6.9761e-13 weaklyHypometh 0.9999889 7.9531e-09 weaklyHypometh 1 3.9765e-06 weaklyHypometh -1.2271e-01 0.0278473 weaklyHypometh 1 insignificant 0.4243222 0.8974926 -0.46803661 10 0.419234 0.873451 -0.45421732 1.0000e+00 1.2198e-55 hypomethylated 1.0000e+00 6.0989e-53 hypomethylated 1.0000e+00 2.2084e-24 hypomethylated 1.0000e+00 1.1042e-21 hypomethylated -0.43583992 2.6762e-06 hypomethylated 1.3381e-04 hypomethylated 0.424947 0.2777460 0.1515010 16 0.518720 0.332529 0.18619124 2.0240e-06 1.0000e+00 weaklyHypermeth 1.1244e-04 1.0000e+00 weaklyHypermeth 2.1637e-07 1.0000e+00 weaklyHypermeth 2.7046e-05 1.0000e+00 weaklyHypermeth 0.1420825 2.9925e-02 weaklyHypermeth 0.4905797 insignificant 0.608621 0.8974926 -0.2835191 10 0.585326 0.873451 -2.8813e-01 1.0000e+00 6.0189e-23 hypomethylated 1.0000e+00 3.0094e-20 hypomethylated 1.0000e+00 3.8712e-16 hypomethylated 1.0000e+00 1.9356e-13 hypomethylated -0.3131281 1.1893e-04 hypomethylated 4.9556e-03 hypomethylated 0.6084960 0.2775393 0.33559003 16 0.571854 0.297399 0.27445448 6.9751e-22 1.0000e+00 hypermethylated 6.9751e-19 1.0000e+00 hypermethylated 4.6429e-13 1.00000000 hypermethylated 4.6429e-10 1.00000 hypermethylated 2.6479e-01 8.6891e-04 hypermethylated 0.124131 insignificant 0.8974926 0.277491 0.62917460 10 0.873451 0.290661 0.5827897 2.4782e-52 1.0000e+00 hypermethylated 2.4782e-49 1.0000e+00 hypermethylated 3.6327e-18 1.0000e+00 hypermethylated 3.6327e-15 1.0000e+00 hypermethylated 0.5779224 5.8722e-06 hypermethylated 7.0618e-04 hypermethylated chr16 48475050 48476050 48696 ZNF423 ENSG00000102935 0.4783142 276 8 0.585493 312 8 0.3935214 152 10 0.4990561 351 8 0.472980 98 8 0.458220 498 10 0.6862272 122 9 0.528710 203 10 0.4757562 141 10 0.5017638 112 8 0.567264 295 9 0.527564 77 6 0.3729302 206 10 0.4347537 70 4 0.416865 137 9 0.5593254 56 5 0.4891156 41 5 0.5047130 314 8 0.427724 323 8 0.476030 431 10 0.557768 80 6 0.3998985 122 8 0.525689 236 9 0.497693 99 7 0.5526533 107 8 0.4623271 456 10 0.457176 160 8 0.472348 105 8 0.3878045 332 9 0.483115 465 9 0.4329546 467 9 0.684356 324 10 0.5638374 252 9 0.4535368 159 7 0.379464 100 6 0.3027066 61 4 0.407515 219 10 0.4033562 468 9 0.3450025 515 8 0.3408342 390 9 0.2675646 674 8 0.3342825 358 8 0.352368 307 8 0.5607805 0.5642507 0.471930 0.5312934 0.5599933 0.5621270 0.7091673 0.6023792 0.5377732 0.5820504 0.641999 0.4717967 0.4812256 0.663801 0.4841845 0.6785154 0.4653937 0.52613343 0.4915104 0.5005324 0.6144729 0.4724287 0.636848 0.530598 0.6210613 0.5194900 0.622704 0.526117 0.5400859 0.5458395 0.5602359 0.714950 0.64353143 0.5898106 0.42579585 0.47318503 0.5451456 0.5624800 0.5173905 0.4764348 0.446938 0.4677417 0.4866398 6 0.4830368 0.4984761 -0.01792965 9 0.468459 0.506722 -0.03826373 0.707765 4.7549e-02 weaklyHypometh 1 1.0000e+00 insignificant 0.7111840 2.9244e-02 weaklyHypometh 1 9.4336e-01 insignificant 9.8345e-07 0.9999726 insignificant 1 insignificant 0.4831514 0.3995234 0.02878256 9 0.511046 0.427520 0.08352546 5.0881e-05 5.6916e-01 weaklyHypermeth 4.6255e-04 1.0000e+00 weaklyHypermeth 6.0672e-03 4.2511e-01 weaklyHypermeth 5.6436e-02 1.0000e+00 weaklyHypermeth 0.07441353 9.6241e-02 insignificant 7.4228e-01 insignificant 0.483037 0.3311052 0.0901953 8 0.468459 0.288489 0.17996957 2.8613e-07 9.9607e-01 weaklyHypermeth 2.2010e-05 1.0000e+00 weaklyHypermeth 6.9976e-06 9.6385e-01 weaklyHypermeth 6.9976e-04 1.0000e+00 weaklyHypermeth 0.1648059 3.3421e-06 weaklyHypermeth 0.0016710 weaklyHypermeth 0.498475 0.3995234 0.0416801 9 0.507333 0.427520 7.9813e-02 8.2448e-05 8.0389e-01 weaklyHypermeth 7.7054e-04 1.0000e+00 weaklyHypermeth 2.3997e-02 6.9220e-01 weaklyHypermeth 1.8602e-01 1.0000e+00 insignificant 0.0744125 1.1143e-01 insignificant 7.5096e-01 insignificant 0.4984761 0.3311052 0.11240610 8 0.506722 0.288489 0.21823330 3.9946e-09 1.0000e+00 weaklyHypermeth 3.5917e-07 1.0000e+00 weaklyHypermeth 1.2509e-05 0.99989162 weaklyHypermeth 1.7869e-03 1.00000 weaklyHypermeth 1.6480e-01 2.9777e-05 weaklyHypermeth 0.014889 weaklyHypermeth 0.3995234 0.331253 0.07773031 8 0.427520 0.314715 0.1128050 1.1616e-02 6.4515e-01 weaklyHypermeth 5.5312e-01 1.0000e+00 insignificant 4.8491e-02 8.9765e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.0903924 5.3033e-02 insignificant 4.9564e-01 insignificant chr16 48835250 48836250 48702 PAPD5 ENSG00000121274 0.3059188 208 13 0.228902 349 14 0.4022235 458 14 0.2542934 210 13 0.232207 145 10 0.425759 223 14 0.2375335 356 11 0.299503 234 11 0.2281080 146 11 0.2714665 159 10 0.397751 313 11 0.260941 239 11 0.0979554 293 10 0.3888889 12 1 0.229722 227 10 0.3125898 172 11 0.1065708 146 9 0.2730026 165 9 0.247310 207 11 0.276377 259 11 0.292984 133 10 0.1775504 91 5 0.290990 249 14 0.176258 117 9 0.4169160 131 6 0.2719679 389 14 0.147009 148 11 0.294841 90 9 0.1457927 178 10 0.244076 397 14 0.2543675 382 14 0.468104 293 10 0.2751576 245 14 0.2928210 187 11 0.472330 413 13 0.0862745 110 6 0.435440 128 11 0.2339407 264 14 0.3927599 245 11 0.2753477 225 13 0.1434742 215 6 0.3747346 230 9 0.207438 199 9 0.2789618 0.2319146 0.318363 0.2135253 0.2510048 0.3962088 0.2798776 0.3920647 0.2552268 0.2596265 0.310983 0.3304595 0.1286706 0.221427 0.2028758 0.2903885 0.1808481 0.21749063 0.2544076 0.2677904 0.3362203 0.1700847 0.239967 0.196920 0.2827052 0.2737324 0.157976 0.346279 0.1472092 0.2173093 0.2492472 0.352280 0.11091589 0.2190132 0.22806033 0.09450141 0.4242314 0.1032676 0.2952480 0.2064307 0.132494 0.2417810 0.2086580 4 0.2700730 0.2709777 0.02090899 14 0.334150 0.315684 0.01846514 0.240795 9.4867e-01 insignificant 1 1.0000e+00 insignificant 0.4443135 9.5518e-01 insignificant 1 1.0000e+00 insignificant 8.7797e-03 0.8032815 insignificant 1 insignificant 0.2699115 0.3266518 -0.03096372 14 0.289759 0.371599 -0.08183905 3.1092e-06 9.8917e-09 weaklyHypometh 3.2729e-05 1.9783e-06 weaklyHypometh 9.5729e-02 5.8008e-02 insignificant 5.6311e-01 1.0000e+00 insignificant -0.02547618 6.8803e-01 insignificant 1.0000e+00 insignificant 0.269912 0.2226212 0.0454614 11 0.289759 0.266598 0.02316139 6.7987e-02 3.1156e-01 insignificant 8.7163e-01 1.0000e+00 insignificant 1.0983e-01 9.6068e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0048997 9.2763e-01 insignificant 1.0000000 insignificant 0.270697 0.3266518 -0.0470184 14 0.270063 0.371599 -1.0154e-01 1.0888e-03 8.3580e-08 weaklyHypometh 8.8519e-03 1.6716e-05 weaklyHypometh 4.3909e-01 2.1490e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0342559 6.0922e-01 insignificant 1.0000e+00 insignificant 0.2706970 0.2226212 0.02317067 11 0.270063 0.266598 0.00346524 2.3579e-01 6.8676e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 3.5911e-01 0.58692501 insignificant 1.0000e+00 1.00000 insignificant -1.3679e-02 8.1345e-01 insignificant 1.000000 insignificant 0.3266518 0.222621 0.02838398 11 0.371599 0.266598 0.1050004 8.4430e-04 2.1506e-01 weaklyHypermeth 5.2769e-02 1.0000e+00 weaklyHypermeth 5.3280e-02 4.8520e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0205764 7.8907e-01 insignificant 1.0000e+00 insignificant chr16 48857450 48858450 48707 ADCY7 ENSG00000121281 0.4794504 142 6 0.359455 77 4 0.3208333 106 7 0.3713762 171 6 0.255519 54 6 0.559671 212 6 0.4145833 75 2 0.588886 125 6 0.4997746 148 6 0.3873442 183 6 0.559375 116 6 0.393854 112 6 0.3429101 216 6 0.3693948 94 6 0.259832 171 6 0.2684295 45 2 0.4270833 46 2 0.2529240 218 6 0.388370 93 6 0.446141 121 6 0.301488 43 3 0.3784261 84 2 0.618590 118 6 0.468042 88 6 0.3849206 76 5 0.4857066 177 6 0.364901 107 7 0.293067 103 6 0.3623059 94 4 0.459704 235 6 0.5462802 199 6 0.653213 185 6 0.0073529 151 6 0.0000000 89 2 0.000000 55 1 0.0000000 47 2 0.023551 122 8 0.0000000 188 6 0.4613691 159 6 0.4922780 119 4 0.5800259 207 6 0.4230184 143 6 0.497068 169 6 0.4636549 0.3738775 0.345400 0.3837734 0.4050538 0.5600773 0.2784314 0.4400449 0.3948961 0.4959904 0.558710 0.2681468 0.2684809 0.455457 0.3330280 0.3775670 0.1746606 0.26557911 0.4234376 0.4015028 0.4772247 0.3034806 0.605639 0.409715 0.4485743 0.4559377 0.326398 0.154993 0.4079615 0.3542852 0.4403856 0.501035 0.00425872 0.0000000 NA 0.00000000 0.0062955 0.0000000 0.4844600 0.4779565 0.469949 0.3102271 0.4839460 2 0.3940594 0.4118037 -0.02019403 6 0.410597 0.488841 -0.07824423 0.804806 5.6171e-02 insignificant 1 1.0000e+00 insignificant 0.8211871 2.0270e-01 insignificant 1 1.0000e+00 insignificant -4.5793e-02 0.2747877 insignificant 1 insignificant 0.3940594 0.0061350 0.38916176 6 0.410597 0.013675 0.39692157 9.4710e-27 1.0000e+00 hypermethylated 4.9847e-25 1.0000e+00 hypermethylated 6.8960e-15 1.0000e+00 hypermethylated 5.3046e-13 1.0000e+00 hypermethylated 0.39210981 2.4729e-13 lowCoverage 3.5327e-11 lowCoverage 0.394132 0.4378921 -0.0484319 6 0.420255 0.525503 -0.10524786 8.3738e-01 2.6424e-04 weaklyHypometh 1.0000e+00 3.7749e-02 weaklyHypometh 9.3362e-01 2.8765e-03 weaklyHypometh 1.0000e+00 2.0547e-01 insignificant -0.0934914 2.0226e-02 weaklyHypometh 0.3889668 insignificant 0.411804 0.0061350 0.4050526 6 0.488841 0.013675 4.7517e-01 1.3132e-26 1.0000e+00 hypermethylated 6.9114e-25 1.0000e+00 hypermethylated 3.4542e-14 1.0000e+00 hypermethylated 2.8785e-12 1.0000e+00 hypermethylated 0.4379031 4.3365e-08 lowCoverage 4.3365e-06 lowCoverage 0.4109043 0.4378921 -0.03464284 6 0.456196 0.525503 -0.06930643 3.1559e-01 3.7739e-03 weaklyHypometh 1.0000e+00 2.9722e-01 insignificant 6.5305e-01 0.00617608 weaklyHypometh 1.0000e+00 0.48869 insignificant -4.7698e-02 2.8178e-01 insignificant 1.000000 insignificant 0.0061633 0.437892 -0.44650396 6 0.015385 0.525503 -0.5101180 1.0000e+00 3.0224e-20 hypomethylated 1.0000e+00 2.3249e-18 hypomethylated 1.0000e+00 3.8483e-09 hypomethylated 1.0000e+00 3.2069e-07 hypomethylated -0.4856013 3.6142e-05 lowCoverage 2.5816e-03 lowCoverage chr16 48875550 48876550 48711 ADCY7 ENSG00000121281 0.9541073 244 5 0.804450 230 5 0.9191952 111 6 0.8402254 174 5 0.892208 78 5 0.923689 410 5 0.9059864 141 5 0.806611 118 5 0.8866480 67 5 0.9039474 74 5 0.884698 263 5 0.912281 51 5 0.8861111 72 5 0.8941392 61 5 0.917918 91 5 0.9523810 13 1 NA 0 0 0.8480787 328 5 0.916898 206 5 0.941515 276 5 0.818048 73 5 0.9600000 17 2 0.948607 132 5 0.989474 100 5 1.0000000 28 3 0.9365881 255 5 0.796970 71 5 0.813747 57 5 0.8727097 267 5 0.932131 257 5 0.9362946 231 5 0.943462 274 5 0.5767879 169 6 0.6231038 94 5 0.370103 289 6 NA 0 0 0.570730 214 5 0.8580120 244 5 0.9492207 334 5 0.8885035 234 5 0.9344904 286 5 0.9719888 345 5 0.889273 267 5 0.9284892 0.7840532 0.899358 0.8361872 0.8763887 0.8998723 0.8844817 0.8103766 0.8979672 0.9025840 0.892857 0.9077714 0.8837851 0.881956 0.9135248 0.9174571 NA 0.84301837 0.8931282 0.9411016 0.8552485 0.9674699 0.942536 0.980659 1.0000000 0.9296729 0.769624 0.743274 0.8936380 0.9275238 0.9203135 0.946198 0.44599934 0.5066989 0.21792955 NA 0.5406290 0.8928300 0.9434946 0.8732041 0.931762 0.9568020 0.8570113 5 0.8843085 0.9012486 -0.01544699 5 0.906173 0.917925 -0.01175153 0.945801 4.0563e-01 insignificant 1 1.0000e+00 insignificant 0.9980618 3.5823e-02 weaklyHypometh 1 1.0000e+00 insignificant -1.8068e-02 0.4309948 lowCoverage 1 lowCoverage 0.8843085 0.5544554 0.30718971 5 0.906173 0.614984 0.29118953 5.3908e-16 7.1984e-01 hypermethylated 1.3477e-14 1.0000e+00 hypermethylated 1.3115e-05 9.8664e-01 hypermethylated 2.6229e-04 1.0000e+00 hypermethylated 0.29452056 1.8819e-02 lowCoverage 2.0910e-01 lowCoverage 0.884309 0.9229195 -0.0407108 5 0.906173 0.941197 -0.03502428 9.9985e-01 1.2489e-02 weaklyHypometh 1.0000e+00 3.6017e-01 insignificant 9.9915e-01 1.2176e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0324275 1.3541e-01 lowCoverage 1.0000000 lowCoverage 0.901249 0.5544554 0.3147789 5 0.917925 0.614984 3.0294e-01 2.1811e-10 9.2364e-01 hypermethylated 4.6406e-09 1.0000e+00 hypermethylated 3.6816e-06 9.9969e-01 hypermethylated 1.0227e-04 1.0000e+00 hypermethylated 0.3125887 1.3930e-02 lowCoverage 1.7197e-01 lowCoverage 0.9012486 0.9229195 -0.02379341 5 0.917925 0.941197 -0.02327275 9.9213e-01 1.4054e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.4597e-01 0.64149344 insignificant 1.0000e+00 1.00000 insignificant -1.4359e-02 5.9000e-01 lowCoverage 1.000000 lowCoverage 0.5544554 0.922920 -0.36449517 5 0.614984 0.941197 -0.3262138 9.9933e-01 1.7588e-05 hypomethylated 1.0000e+00 3.0856e-04 hypomethylated 9.9999e-01 6.4064e-04 hypomethylated 1.0000e+00 1.5253e-02 hypomethylated -0.3269481 1.2382e-02 lowCoverage 1.9049e-01 lowCoverage chr16 49432450 49433450 48714 CYLD ENSG00000083799 0.5346216 354 13 0.180185 311 12 0.3079073 315 12 0.2594998 427 13 0.311412 215 12 0.641002 269 13 0.2191687 326 12 0.671760 303 12 0.2096759 565 12 0.2356978 536 12 0.307149 444 12 0.216692 248 12 0.1990428 624 12 0.0626658 277 8 0.206315 496 12 0.2979741 343 12 0.1602980 176 12 0.5129200 578 13 0.935694 349 13 0.395667 333 13 0.441896 110 12 0.2470146 243 12 0.330330 291 12 0.255901 175 12 0.4021235 184 12 0.3810076 493 13 0.168758 235 12 0.275239 223 12 0.1419489 298 12 0.266928 598 13 0.2839012 501 13 0.446589 534 12 0.3093236 419 12 0.3507940 210 12 0.111355 186 5 0.3519297 139 12 0.285012 191 12 0.2917200 372 12 0.2737860 545 13 0.2981447 461 13 0.1940664 846 13 0.3158080 609 12 0.426196 291 13 0.4690924 0.1759120 0.226638 0.1414304 0.1802450 0.6039564 0.1553274 0.7213232 0.1482174 0.1474490 0.227183 0.1722051 0.1562586 0.196037 0.1476513 0.2042198 0.1153046 0.43578634 0.9291996 0.2911971 0.3679915 0.1409502 0.175125 0.183710 0.3716551 0.2985576 0.133566 0.196618 0.1226929 0.1713897 0.1319802 0.191972 0.24496332 0.2846601 0.27125413 0.46707335 0.2930526 0.2823290 0.1669036 0.1873775 0.105829 0.1012008 0.3318274 11 0.2671919 0.2163139 0.07807183 12 0.382806 0.460591 -0.07778487 0.022575 1.0000e+00 weaklyHypermeth 1 1.0000e+00 insignificant 0.7537411 9.8064e-01 insignificant 1 1.0000e+00 insignificant 3.9798e-02 0.4807563 insignificant 1 insignificant 0.2670318 0.2953473 0.01730460 12 0.369019 0.286256 0.08276277 2.9969e-02 9.2951e-01 weaklyHypermeth 1.6743e-01 1.0000e+00 insignificant 3.8748e-01 5.3311e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.05991165 3.2962e-01 insignificant 1.0000e+00 insignificant 0.267176 0.1639942 0.1092922 12 0.383662 0.266643 0.11701875 9.6047e-05 9.9998e-01 weaklyHypermeth 3.8419e-03 1.0000e+00 weaklyHypermeth 2.5468e-02 9.9331e-01 weaklyHypermeth 4.8052e-01 1.0000e+00 insignificant 0.0416673 5.0144e-01 insignificant 1.0000000 insignificant 0.215353 0.2907053 -0.0624142 12 0.306874 0.241761 6.5114e-02 6.9402e-01 1.6630e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.1247e-01 3.7168e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0201139 6.7197e-01 insignificant 1.0000e+00 insignificant 0.2147494 0.1639942 0.03473693 12 0.302980 0.266643 0.03633621 6.7184e-02 9.8014e-01 insignificant 8.3980e-01 1.0000e+00 insignificant 3.3253e-01 0.88054203 insignificant 1.0000e+00 1.00000 insignificant 1.8696e-03 9.6925e-01 insignificant 1.000000 insignificant 0.2961957 0.163994 0.09682696 13 0.339720 0.266643 0.0730762 3.7783e-02 8.5664e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 2.8673e-02 9.5903e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant -0.0182443 7.3483e-01 insignificant 1.0000e+00 insignificant chr16 51675950 51676950 48742 CHD9 ENSG00000177200 0.7200850 262 6 0.737795 32 2 0.6611111 35 6 0.6964294 147 6 0.723280 65 5 0.664630 83 5 0.7409091 50 6 0.710714 40 5 0.8166667 29 4 0.7708333 56 6 0.682572 79 6 0.578571 28 3 0.8825397 61 4 0.6944444 49 3 0.712963 41 4 0.4722222 39 3 0.6259717 164 5 0.8183211 154 6 0.812500 20 1 0.775000 75 6 0.833333 15 0 0.8333333 11 0 0.650310 151 6 0.654762 33 4 0.9333333 15 1 0.8274411 42 4 0.716667 17 1 0.500000 15 1 0.7768065 60 4 0.767196 26 3 0.7910256 27 2 0.850926 50 3 0.5732504 80 6 0.8316993 34 1 0.729211 47 2 1.0000000 6 0 0.738072 42 4 0.6059259 53 3 0.8147857 212 6 0.7641072 200 6 0.7311610 167 6 0.7472222 203 6 0.749349 154 6 0.7095104 0.7092803 0.648611 0.6768562 0.7406085 0.6720833 0.7136364 0.6967262 0.7875000 0.7482639 0.615267 0.6545350 0.8531746 0.707341 0.7222222 0.4652778 0.6644757 0.81334252 0.7436976 0.7812500 0.7916667 0.8506746 0.666062 0.753472 0.8853968 0.8520623 0.735570 0.572376 0.7402389 0.7896825 0.7516026 0.860417 0.58618777 0.8529412 0.71079749 0.83910811 0.7493873 0.6118519 0.7883474 0.7622985 0.735248 0.7618056 0.7567883 0 0.7528164 0.7727273 -0.00706178 4 0.759646 0.628227 0.13141935 0.752384 5.4310e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.9665641 2.8826e-02 lowCoverage 1 9.4336e-01 lowCoverage -4.6383e-02 0.2511241 lowCoverage 1 lowCoverage 0.7526525 0.6870229 0.10437602 4 0.719587 0.672698 0.04688880 3.0801e-03 6.7127e-01 lowCoverage 2.0398e-02 1.0000e+00 lowCoverage 2.5698e-01 4.9738e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.03148189 6.5435e-01 lowCoverage 1.0000e+00 lowCoverage 0.752653 0.8290598 -0.0506480 6 0.719587 0.763245 -0.04365821 9.3180e-01 1.5117e-02 weaklyHypometh 1.0000e+00 3.7279e-01 insignificant 8.3659e-01 2.7202e-02 weaklyHypometh 1.0000e+00 5.7877e-01 insignificant -0.0464470 7.8259e-02 lowCoverage 0.8995230 lowCoverage 0.774403 0.6870229 0.0860208 3 0.732931 0.672698 6.0233e-02 3.8245e-02 8.9640e-01 lowCoverage 2.0785e-01 1.0000e+00 lowCoverage 4.4826e-02 9.3063e-01 lowCoverage 3.0915e-01 1.0000e+00 lowCoverage 0.0149013 8.4113e-01 lowCoverage 1.0000e+00 lowCoverage 0.7744035 0.8290598 -0.03827268 4 0.732931 0.763245 -0.03031412 9.6634e-01 8.7214e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 3.2161e-01 0.89930459 lowCoverage 1.0000e+00 1.00000 lowCoverage -6.3865e-05 9.9862e-01 lowCoverage 1.000000 lowCoverage 0.6870229 0.829060 -0.14250694 4 0.672698 0.763245 -0.0905470 9.6622e-01 1.6861e-02 lowCoverage 1.0000e+00 1.2719e-01 lowCoverage 8.3518e-01 1.0256e-01 lowCoverage 1.0000e+00 6.6600e-01 lowCoverage -0.0149651 8.2696e-01 lowCoverage 1.0000e+00 lowCoverage chr16 51685050 51686050 48744 CHD9 ENSG00000177200 0.9663076 106 3 0.821930 109 5 0.6264972 130 5 0.9302410 112 3 0.682579 100 5 0.837270 138 6 0.7688135 133 5 0.802267 86 5 0.6312603 140 5 0.7872917 87 5 0.712354 155 5 0.774656 114 5 0.8364621 118 5 0.6428571 36 2 0.874983 143 5 0.7121905 90 5 0.6916667 68 5 0.6861952 137 2 0.775092 123 5 0.787377 141 6 0.817626 86 5 0.5652174 48 3 0.901484 92 5 0.854251 72 4 0.8884141 46 2 0.8478929 119 5 0.622403 103 6 0.778860 63 6 0.7344648 113 5 0.832912 128 5 0.7985642 104 5 0.821661 124 6 0.6797138 103 5 0.7931385 102 5 0.976263 84 5 0.7250000 28 4 0.799425 118 6 0.9352453 102 5 0.8449979 139 5 0.7075000 122 5 0.8490196 164 5 0.8151177 93 5 0.776426 123 5 0.9274902 0.7807092 0.747835 0.9240363 0.7948396 0.9332287 0.8031462 0.8146364 0.7430892 0.8914646 0.862143 0.7398392 0.8358585 0.930642 0.8672712 0.7278766 0.6911660 0.77434739 0.9010860 0.9024131 0.9476463 0.7580401 0.941035 0.972442 0.8519008 0.8528274 0.768895 0.934972 0.8656882 0.8508800 0.8458422 0.829427 0.76932414 0.9533053 0.98004725 0.83369099 0.9352079 0.8725731 0.8776173 0.8092275 0.820996 0.7421512 0.7860551 2 0.8314210 0.8140383 -0.00673321 5 0.772155 0.743602 0.02855257 0.323463 7.4643e-01 insignificant 1 1.0000e+00 insignificant 0.6375076 3.4330e-01 insignificant 1 1.0000e+00 insignificant -2.1231e-02 0.5655352 lowCoverage 1 lowCoverage 0.8314210 0.8770950 -0.06488391 5 0.772155 0.793739 -0.02158450 6.5749e-01 1.4675e-03 weaklyHypometh 1.0000e+00 1.0482e-01 insignificant 9.2986e-01 1.6516e-03 weaklyHypometh 1.0000e+00 1.6516e-01 insignificant -0.05071639 3.6125e-01 lowCoverage 1.0000e+00 lowCoverage 0.831421 0.8112324 0.0199745 5 0.772155 0.784805 -0.01264977 5.0143e-01 2.8040e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.2451e-01 5.7723e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0311977 3.7715e-01 lowCoverage 1.0000000 lowCoverage 0.814038 0.8770950 -0.0547951 5 0.743602 0.793739 -5.0137e-02 8.4972e-01 1.5534e-04 weaklyHypometh 1.0000e+00 1.9418e-02 weaklyHypometh 5.5042e-01 3.8618e-03 weaklyHypometh 1.0000e+00 5.5168e-01 insignificant -0.0294850 6.1050e-01 lowCoverage 1.0000e+00 lowCoverage 0.8140383 0.8112324 0.02100546 5 0.743602 0.784805 -0.04120233 4.0044e-01 5.6069e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 1.0795e-01 0.43091419 insignificant 1.0000e+00 1.00000 insignificant -9.9663e-03 8.0472e-01 lowCoverage 1.000000 lowCoverage 0.8770950 0.811232 0.07449546 5 0.793739 0.784805 0.0089347 1.0279e-05 7.6370e-01 weaklyHypermeth 1.4684e-03 1.0000e+00 weaklyHypermeth 3.0790e-03 9.7369e-01 weaklyHypermeth 2.7991e-01 1.0000e+00 insignificant 0.0195187 7.2857e-01 insignificant 1.0000e+00 insignificant chr16 51691050 51692050 48745 CHD9 ENSG00000177200 0.0222233 423 7 0.010753 632 10 0.0083824 487 10 0.0979616 271 6 0.027715 425 10 0.113444 552 9 0.0077244 482 10 0.060506 411 10 0.0448432 406 10 0.0087284 348 9 0.022018 398 10 0.113990 339 9 0.0942167 353 9 0.0255617 167 5 0.009596 525 11 0.0363636 312 10 0.0953463 222 6 0.0401820 322 9 0.109557 384 9 0.176777 462 9 0.071432 133 9 0.0845817 239 9 0.056726 309 9 0.022989 236 10 0.0712121 181 9 0.0113749 510 10 0.055239 474 9 0.058577 166 9 0.0238413 303 9 0.012083 517 10 0.0169737 484 10 0.090214 483 9 0.0044444 399 10 0.0849727 224 7 0.000000 322 8 0.0000000 121 6 0.072237 291 9 0.0043478 327 10 0.1571360 465 9 0.0888303 456 7 0.1256100 499 6 0.1455403 392 6 0.062954 391 6 0.0087097 0.0088144 0.006278 0.0366719 0.0036895 0.0337905 0.0069607 0.0153639 0.0132905 0.0172897 0.016346 0.0073607 0.0050141 0.016666 0.0025054 0.0000000 0.0044728 0.01530764 0.0075608 0.0265274 0.0068071 0.0635220 0.030146 0.019656 0.0113625 0.0090200 0.031964 0.040977 0.0185674 0.0067987 0.0142000 0.035522 0.00107257 0.0147079 0.00133861 0.00000000 0.0177566 0.0010492 0.1141363 0.0576206 0.048153 0.0810081 0.0363491 6 0.0156546 0.0265180 -0.01056737 9 0.050843 0.047141 0.00370239 0.994609 2.1195e-03 weaklyHypometh 1 2.1195e-01 insignificant 0.9817795 3.3448e-03 weaklyHypometh 1 3.0407e-01 insignificant 8.3575e-03 0.5465227 insignificant 1 insignificant 0.0156546 0.0124703 0.00885818 9 0.050843 0.042519 0.00832487 2.1792e-02 9.9665e-01 weaklyHypermeth 1.2819e-01 1.0000e+00 insignificant 3.4973e-02 9.7263e-01 weaklyHypermeth 2.5906e-01 1.0000e+00 insignificant 0.02862749 1.7309e-01 insignificant 1.0000e+00 insignificant 0.014206 0.0867000 -0.0611562 6 0.023495 0.118774 -0.09527854 9.9998e-01 1.8932e-23 weaklyHypometh 1.0000e+00 1.8932e-20 weaklyHypometh 9.9989e-01 2.0194e-10 weaklyHypometh 1.0000e+00 1.0097e-07 weaklyHypometh -0.0597196 2.2126e-02 weaklyHypometh 0.4064932 insignificant 0.026518 0.0124703 0.0207961 9 0.047141 0.042519 4.6225e-03 3.1355e-03 9.9932e-01 weaklyHypermeth 2.3055e-02 1.0000e+00 weaklyHypermeth 3.5225e-04 9.9660e-01 weaklyHypermeth 5.8708e-03 1.0000e+00 weaklyHypermeth 0.0202699 2.9978e-01 insignificant 1.0000e+00 insignificant 0.0263158 0.0867000 -0.04953508 6 0.037569 0.118774 -0.08120445 9.9628e-01 1.6431e-09 weaklyHypometh 1.0000e+00 1.6431e-06 weaklyHypometh 9.9469e-01 0.00016820 weaklyHypometh 1.0000e+00 0.15244 insignificant -6.8077e-02 1.3344e-02 weaklyHypometh 0.444807 insignificant 0.0118977 0.086700 -0.07442368 6 0.013437 0.118774 -0.1053368 9.9999e-01 1.5793e-10 weaklyHypometh 1.0000e+00 7.1788e-09 weaklyHypometh 9.9986e-01 4.5184e-07 weaklyHypometh 1.0000e+00 2.6579e-05 weaklyHypometh -0.0883471 5.3322e-03 weaklyHypometh 1.0882e-01 insignificant chr16 52845350 52846350 48773 FTO ENSG00000140718 0.8000000 32 4 0.575000 46 5 0.6666667 36 5 0.8250000 32 5 0.589815 46 4 0.778571 41 5 0.7916667 23 1 0.628283 62 5 0.6977778 32 5 0.8273810 24 1 0.803841 118 5 0.708333 17 0 0.7738095 49 5 0.9750000 42 5 0.850000 25 2 0.2500000 12 0 NA 0 0 0.7695238 22 2 0.621429 60 5 0.910714 38 5 0.847222 19 0 NA 0 0 0.720000 22 4 0.816667 26 3 0.4166667 8 0 0.6252205 54 5 0.860000 26 1 0.700000 11 0 0.7830769 32 3 0.763683 54 5 0.7588889 51 5 0.710000 44 4 0.5000000 49 4 0.6174603 38 5 0.679683 58 5 0.0000000 1 0 0.716667 22 1 0.6451299 40 5 0.5666667 12 0 0.8800000 49 5 0.9000000 37 4 0.7333333 15 0 0.592593 43 5 0.8293651 0.5868056 0.623016 0.8275463 0.7288580 0.7986111 0.7037037 0.6408530 0.7067901 0.7797619 0.825103 0.8958333 0.7588183 0.965278 0.8611111 0.3472222 NA 0.81216931 0.6190476 0.8730159 0.8379630 NA 0.777778 0.808333 0.5000415 0.7337412 0.833333 0.861111 0.8090812 0.8003270 0.7520062 0.715278 0.53935185 0.6014109 0.68650794 NA 0.7685185 0.7242965 0.6018519 0.8694444 0.920139 0.7708333 0.7376543 0 0.7357992 0.7580175 -0.02188842 4 0.723658 0.621886 0.10177188 0.903091 5.7434e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.8470040 5.7286e-01 lowCoverage 1 1.0000e+00 lowCoverage 1.1668e-03 0.9822705 lowCoverage 1 lowCoverage 0.7379032 0.6298077 0.11168891 5 0.742585 0.636735 0.10585010 9.4966e-04 9.2719e-01 weaklyHypermeth 7.0345e-03 1.0000e+00 weaklyHypermeth 5.6214e-03 8.6143e-01 weaklyHypermeth 5.3537e-02 1.0000e+00 weaklyHypermeth 0.20207913 1.2928e-01 lowCoverage 9.1131e-01 lowCoverage 0.733957 0.7820513 -0.0392643 4 0.618821 0.668129 -0.04930837 8.4487e-01 7.9129e-03 lowCoverage 1.0000e+00 2.8260e-01 lowCoverage 6.4496e-01 3.5926e-02 lowCoverage 1.0000e+00 6.9269e-01 lowCoverage -0.0059495 9.4187e-01 lowCoverage 1.0000000 lowCoverage 0.760479 0.6298077 0.1353886 4 0.759395 0.636735 1.2266e-01 1.1760e-03 9.3362e-01 lowCoverage 9.4082e-03 1.0000e+00 lowCoverage 1.3648e-02 9.8565e-01 lowCoverage 1.1469e-01 1.0000e+00 lowCoverage 0.2009124 1.3170e-01 lowCoverage 8.4421e-01 lowCoverage 0.7610619 0.7820513 -0.03160858 3 0.766163 0.668129 0.09803381 5.6156e-01 1.0747e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 6.6624e-01 0.11169872 lowCoverage 1.0000e+00 1.00000 lowCoverage -7.1163e-03 9.3095e-01 lowCoverage 1.000000 lowCoverage 0.6298077 0.787097 -0.13850349 4 0.636735 0.801755 -0.1650201 8.5559e-01 4.0218e-05 lowCoverage 1.0000e+00 6.4868e-04 lowCoverage 7.1527e-01 1.4168e-02 lowCoverage 1.0000e+00 1.4914e-01 lowCoverage -0.2080286 1.4673e-01 lowCoverage 9.8831e-01 lowCoverage chr16 54061550 54062550 48792 IRX6 ENSG00000159387 0.6900899 386 6 0.443855 360 7 0.5170068 59 5 0.6075682 397 6 0.310544 46 6 0.755158 328 5 0.5006547 148 7 0.635117 95 5 0.3007265 97 5 0.6145833 24 0 0.685576 232 7 0.666667 24 2 0.2947846 40 4 0.4858631 43 6 0.472727 46 4 0.7166667 24 2 NA 0 0 0.5976080 408 6 0.242693 136 4 0.304891 261 6 0.979592 29 3 0.6000000 10 0 0.747802 129 6 0.625085 80 6 0.6321289 170 5 0.5709418 300 7 0.711731 90 5 0.886735 28 2 0.5045363 135 6 0.693937 272 6 0.5830787 245 6 0.834754 223 6 0.6070707 197 6 0.4880952 135 5 0.335499 239 5 0.4285714 139 2 0.316213 256 6 0.5269088 305 6 0.7177623 559 6 0.6411816 390 6 0.4782862 890 6 0.5641026 243 4 0.444549 446 6 0.5931409 0.5166984 0.539508 0.6162716 0.2464678 0.6717332 0.5091054 0.5206682 0.3611637 0.5961538 0.666827 0.6373626 0.2821385 0.618459 0.4565435 0.6538462 NA 0.52869353 0.2190494 0.2964186 0.9686028 0.6122449 0.730045 0.611722 0.7003107 0.5406633 0.662608 0.861460 0.4729610 0.5350641 0.4858727 0.778107 0.54995005 0.5337520 0.35602743 0.43956044 0.3310721 0.5725072 0.6155193 0.5674960 0.396852 0.5078090 0.4549597 0 0.5481928 0.6388077 -0.10912390 6 0.422937 0.721614 -0.29867678 0.996332 3.9866e-03 weaklyHypometh 1 2.8476e-01 insignificant 0.9999992 1.8582e-05 weaklyHypometh 1 6.1941e-03 weaklyHypometh -1.7949e-01 0.0033829 lowCoverage 1 lowCoverage 0.5490632 0.4232887 0.23412427 6 0.543777 0.431017 0.11275989 4.5434e-13 8.5706e-05 hypermethylated 9.2722e-12 1.0713e-02 hypermethylated 1.4900e-05 8.8470e-03 hypermethylated 2.8764e-04 5.6537e-01 hypermethylated 0.06764803 2.7640e-01 lowCoverage 1.0000e+00 lowCoverage 0.549063 0.5075158 0.0354825 6 0.543777 0.550745 -0.00696823 4.5789e-01 5.9507e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.0695e-01 7.0446e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0511352 4.3771e-01 lowCoverage 1.0000000 lowCoverage 0.638173 0.4232887 0.2678348 6 0.642075 0.431017 2.1106e-01 6.0722e-19 2.1282e-02 hypermethylated 2.2490e-17 1.0000e+00 hypermethylated 4.6761e-06 1.6812e-01 hypermethylated 1.2306e-04 1.0000e+00 hypermethylated 0.2471337 1.5992e-03 lowCoverage 3.1985e-02 lowCoverage 0.6381733 0.5075158 0.14025966 6 0.642075 0.550745 0.09133049 3.2364e-04 7.6976e-01 weaklyHypermeth 8.9901e-03 1.0000e+00 weaklyHypermeth 9.3615e-04 0.99477344 weaklyHypermeth 3.7446e-02 1.00000 weaklyHypermeth 1.2835e-01 7.8431e-02 lowCoverage 1.000000 lowCoverage 0.4232887 0.507516 -0.05126138 6 0.431017 0.550745 -0.1197281 8.3023e-03 2.0130e-09 weaklyHypometh 4.3696e-01 7.4555e-08 weaklyHypometh 1.0322e-01 9.0228e-04 weaklyHypometh 1.0000e+00 1.8414e-02 weaklyHypometh -0.1187832 1.1764e-01 insignificant 8.7769e-01 insignificant chr16 54880650 54881650 48817 GNAO1 ENSG00000087258 0.8789718 489 5 0.828487 209 5 0.7903299 80 5 0.9150624 315 5 0.900045 77 5 0.900283 385 5 0.8447379 136 5 0.710776 135 5 0.7669538 105 5 0.9136364 64 4 0.930387 207 5 0.853205 50 5 0.8090226 75 5 0.8484103 70 5 0.727474 90 5 0.9111111 30 2 0.7500000 12 2 0.8575195 558 5 0.821158 153 5 0.714973 343 5 0.780952 48 5 0.8635628 37 2 0.758159 136 5 0.935280 85 5 0.8920635 49 5 0.9029383 166 5 0.921429 43 5 0.899095 81 5 0.8784102 173 5 0.874934 215 5 0.8427984 204 5 0.786155 287 5 0.6246186 193 5 0.6004529 100 5 0.500000 148 3 0.4333333 37 2 0.549484 169 5 0.7050960 280 5 0.7492500 400 5 0.8698991 285 5 0.8242726 619 5 0.7774077 443 5 0.829390 358 5 0.8512306 0.8398755 0.795464 0.9028128 0.9104706 0.9126210 0.8509445 0.8579237 0.7617465 0.9304573 0.926278 0.8129664 0.8297353 0.871277 0.8658384 0.8868929 0.8130319 0.83607144 0.8253347 0.8696659 0.8081836 0.8626997 0.930216 0.939548 0.8802395 0.8857363 0.917665 0.897079 0.8787949 0.8663671 0.8370274 0.905287 0.65715522 0.6249051 0.60876835 0.32448017 0.6763848 0.6935005 0.7584244 0.8636219 0.820072 0.8071653 0.8452620 4 0.8654383 0.8845144 -0.02407661 5 0.726355 0.823533 -0.09717743 0.991849 1.0985e-01 insignificant 1 1.0000e+00 insignificant 0.9992399 1.2730e-01 insignificant 1 1.0000e+00 insignificant -2.7687e-02 0.2390610 lowCoverage 1 lowCoverage 0.8656425 0.6170442 0.24338484 5 0.758692 0.663937 0.09475467 1.7785e-14 1.0000e+00 hypermethylated 3.9523e-13 1.0000e+00 hypermethylated 4.4626e-07 9.9996e-01 hypermethylated 1.3946e-05 1.0000e+00 hypermethylated 0.26479639 4.9627e-04 lowCoverage 1.4596e-02 lowCoverage 0.865884 0.7966746 0.0792410 5 0.885141 0.804354 0.08078640 4.8162e-06 9.7280e-01 weaklyHypermeth 2.5348e-04 1.0000e+00 weaklyHypermeth 8.1945e-03 9.4964e-01 weaklyHypermeth 2.1564e-01 1.0000e+00 insignificant 0.0235835 3.9441e-01 lowCoverage 1.0000000 lowCoverage 0.885375 0.6170442 0.2628068 5 0.845942 0.663937 1.8201e-01 1.0487e-10 9.9925e-01 hypermethylated 2.2797e-09 1.0000e+00 hypermethylated 1.6057e-06 9.9998e-01 hypermethylated 4.8658e-05 1.0000e+00 hypermethylated 0.2924839 2.6018e-04 lowCoverage 8.1306e-03 lowCoverage 0.8858839 0.7966746 0.10589385 5 0.903599 0.804354 0.09924519 3.5529e-06 9.8069e-01 weaklyHypermeth 1.3159e-04 1.0000e+00 weaklyHypermeth 1.3263e-03 0.96635967 weaklyHypermeth 5.1010e-02 1.00000 weaklyHypermeth 5.1271e-02 8.8343e-02 lowCoverage 1.000000 lowCoverage 0.6166307 0.796675 -0.15746797 5 0.607927 0.804354 -0.1964274 9.9622e-01 3.0149e-04 weaklyHypometh 1.0000e+00 3.5892e-03 weaklyHypometh 9.9998e-01 6.3945e-04 weaklyHypometh 1.0000e+00 1.5253e-02 weaklyHypometh -0.2412129 7.7884e-04 lowCoverage 2.9955e-02 lowCoverage chr16 54947450 54948450 48821 GNAO1 ENSG00000087258 0.1225225 97 6 0.041351 190 6 0.0741810 205 6 0.0159768 178 2 0.066206 89 4 0.180237 150 6 0.4678161 127 4 0.047321 86 4 0.0332684 89 4 0.0714286 71 4 0.116667 96 4 0.050000 62 4 0.0690789 69 2 0.0000000 6 0 0.058065 74 4 0.0000000 49 2 0.0161290 41 2 0.0166667 48 4 0.250000 59 2 0.053950 107 6 0.000000 32 4 0.0000000 19 2 0.097351 118 6 0.020833 37 4 0.0114943 60 2 0.0429240 218 6 0.000000 43 4 0.428571 22 2 0.0000000 37 2 0.023066 216 6 0.0636899 187 6 0.133015 170 6 0.0061728 155 6 0.0579545 61 4 0.000000 182 6 0.0000000 33 2 0.042857 42 4 0.0557680 123 6 0.1295455 141 6 0.0086168 168 6 0.0127210 202 5 0.2000000 7 0 0.059375 138 3 0.0193050 0.0473485 0.045539 0.0136944 0.0508187 0.1402028 0.0487685 0.0389456 0.0304391 0.0408163 0.066667 0.0285714 0.0469925 0.012816 0.0423963 0.0000000 0.0473390 0.01428571 0.1428571 0.0487941 0.0000000 0.0000000 0.091437 0.011905 0.0098522 0.0217747 0.000000 0.117509 0.0000000 0.0174400 0.0521566 0.096031 0.00000000 0.0474026 0.00000000 0.00000000 0.0510204 0.0433455 0.0051948 0.0086168 0.010904 0.1486821 0.0794643 0 0.0687467 0.0649351 0.00978542 4 0.208717 0.196188 0.01252904 0.590771 7.8426e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.5432636 8.5262e-01 lowCoverage 1 1.0000e+00 lowCoverage 1.9131e-02 0.6577733 lowCoverage 1 lowCoverage 0.0682540 0.0235690 0.04652297 4 0.076836 0.022925 0.05391115 9.8048e-03 9.7896e-01 lowCoverage 6.1280e-02 1.0000e+00 lowCoverage 5.4366e-02 9.6004e-01 lowCoverage 3.6734e-01 1.0000e+00 lowCoverage 0.06041778 3.3735e-02 lowCoverage 3.3073e-01 lowCoverage 0.068747 0.0382263 0.0618675 3 0.208717 0.018595 0.19012122 8.4075e-04 9.1482e-01 lowCoverage 2.4021e-02 1.0000e+00 lowCoverage 1.5615e-02 9.8218e-01 lowCoverage 3.6313e-01 1.0000e+00 lowCoverage 0.0054916 9.0369e-01 lowCoverage 1.0000000 lowCoverage 0.064014 0.0234899 0.0397397 6 0.053330 0.019650 3.3681e-02 7.8844e-02 9.9926e-01 insignificant 4.0022e-01 1.0000e+00 insignificant 1.9385e-01 9.9683e-01 insignificant 9.9921e-01 1.0000e+00 insignificant 0.0412866 2.8223e-01 lowCoverage 1.0000e+00 lowCoverage 0.0640138 0.0397554 0.04083717 3 0.053330 0.161453 -0.10812210 1.0243e-02 9.8841e-01 lowCoverage 1.8968e-01 1.0000e+00 lowCoverage 2.4756e-02 0.70797065 lowCoverage 5.0523e-01 1.00000 lowCoverage -1.3640e-02 7.9273e-01 lowCoverage 1.000000 lowCoverage 0.0234899 0.039755 -0.00540848 3 0.019650 0.161453 -0.1418026 3.4363e-01 9.3974e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 5.0318e-01 4.8600e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0549262 2.1463e-01 lowCoverage 1.0000e+00 lowCoverage chr16 55557150 55558150 48835 CETP ENSG00000087237 0.8079469 416 10 0.714498 382 12 0.7183111 208 10 0.8373094 454 10 0.866741 146 10 0.762858 357 10 0.7339284 190 10 0.754371 240 10 0.7468519 219 10 0.7279654 168 8 0.741795 320 10 0.645442 67 7 0.7891061 253 10 0.7571429 55 6 0.912391 196 10 0.8185383 100 9 0.8290043 112 7 0.7531988 419 12 0.838855 181 10 0.784712 292 10 0.693333 86 7 0.8035012 110 7 0.783312 208 9 0.801919 157 9 0.7613728 110 7 0.8384353 384 10 0.648782 122 9 0.855081 103 6 0.7354261 211 8 0.767938 358 10 0.7587716 379 10 0.768058 429 10 0.7925897 240 10 0.8552174 143 10 0.640571 140 6 0.7092857 66 6 0.793212 169 10 0.6050740 333 10 0.8175935 392 10 0.7959626 347 10 0.6712792 569 10 0.7381299 338 10 0.833607 435 10 0.8822471 0.7911462 0.725003 0.8718447 0.8736278 0.8481205 0.7499163 0.7959835 0.7914530 0.7955079 0.833092 0.7151193 0.8335651 0.774606 0.8857937 0.8152910 0.7369084 0.82049610 0.8232832 0.8079433 0.7840849 0.8152722 0.853499 0.801595 0.8583738 0.8915099 0.770133 0.875336 0.8235488 0.8641149 0.8416755 0.841412 0.80835858 0.8906700 0.68351586 0.76559303 0.8626841 0.6677911 0.8295953 0.8331210 0.779942 0.8009017 0.8418712 5 0.8134031 0.8429970 -0.01725778 10 0.767144 0.771479 -0.00433473 0.912072 1.8204e-01 insignificant 1 1.0000e+00 insignificant 0.4790208 3.4390e-01 insignificant 1 1.0000e+00 insignificant 9.0542e-03 0.6778633 insignificant 1 insignificant 0.8134031 0.7057745 0.10369353 10 0.767144 0.677449 0.08969519 1.0576e-05 7.9113e-01 weaklyHypermeth 1.0683e-04 1.0000e+00 weaklyHypermeth 2.9668e-01 4.6745e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.04439008 3.3123e-01 insignificant 1.0000e+00 insignificant 0.813403 0.8049015 0.0079067 10 0.767144 0.727889 0.03925519 9.5852e-02 4.4271e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.1057e-01 4.8288e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0057339 8.6719e-01 insignificant 1.0000000 insignificant 0.842997 0.7057745 0.1238181 10 0.771479 0.677449 9.4030e-02 3.1269e-05 9.2431e-01 weaklyHypermeth 3.1907e-04 1.0000e+00 weaklyHypermeth 2.4496e-01 4.1659e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0353358 4.4044e-01 insignificant 1.0000e+00 insignificant 0.8429970 0.8049015 0.02511556 10 0.771479 0.727889 0.04358992 2.3099e-02 8.4660e-01 weaklyHypermeth 3.7867e-01 1.0000e+00 insignificant 1.2539e-01 0.87033585 insignificant 1.0000e+00 1.00000 insignificant -3.3203e-03 9.2525e-01 insignificant 1.000000 insignificant 0.7057745 0.804901 -0.09970397 10 0.677449 0.727889 -0.0504400 4.0671e-01 5.0282e-03 weaklyHypometh 1.0000e+00 4.4497e-02 weaklyHypometh 5.3982e-01 1.6076e-01 insignificant 1.0000e+00 9.5125e-01 insignificant -0.0386561 4.5749e-01 insignificant 1.0000e+00 insignificant chr16 55868850 55869850 48847 ARL2BP ENSG00000102931 0.7940173 173 6 NA 0 0 NA 0 0 0.8150327 157 5 NA 0 0 0.759259 62 4 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 0.7995273 189 4 0.850000 15 1 0.830612 30 4 NA 0 0 NA 0 0 0.749231 76 4 NA 0 0 NA 0 0 0.6597222 36 4 NA 0 0 NA 0 0 NA 0 0 0.641053 44 4 0.6805556 25 1 0.788889 48 6 NA 0 0 NA 0 0 0.613831 58 6 0.5785714 53 5 NA 0 0 0.7753759 80 6 0.6781220 96 5 0.6590873 96 6 0.7375912 137 6 0.8355263 60 3 0.640100 94 5 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0.7532051 0.7030568 0.02644323 0 0.758009 0.722553 0.03545615 0.122381 2.7750e-01 noCoverage 1 1.0000e+00 noCoverage 0.0389702 7.9652e-01 noCoverage 1 1.0000e+00 noCoverage 1.0418e-01 0.0163008 lowCoverage 1 lowCoverage 0.7539936 0.6230366 0.10566539 3 0.792579 0.644618 0.14796089 1.9676e-03 9.9975e-01 lowCoverage 1.3639e-02 1.0000e+00 lowCoverage 5.1480e-02 9.9884e-01 lowCoverage 3.6000e-01 1.0000e+00 lowCoverage 0.15214880 1.2288e-01 lowCoverage 8.8403e-01 lowCoverage 0.753205 0.7453416 0.0404809 3 0.758009 0.701445 0.05656404 5.8398e-02 9.9566e-01 lowCoverage 7.9771e-01 1.0000e+00 lowCoverage 2.8549e-02 9.9960e-01 lowCoverage 5.1523e-01 1.0000e+00 lowCoverage 0.0979894 4.7492e-02 lowCoverage 0.6665811 lowCoverage 0.703057 0.6210526 0.0842089 0 0.722553 0.585388 1.3716e-01 5.7488e-03 8.8510e-01 noCoverage 3.8583e-02 1.0000e+00 noCoverage 6.7320e-02 7.0952e-01 noCoverage 4.2879e-01 1.0000e+00 noCoverage 0.0479643 5.2631e-01 lowCoverage 1.0000e+00 lowCoverage 0.7030568 0.7453416 0.01920063 0 0.722553 0.701445 0.02110789 6.2893e-02 7.6629e-01 noCoverage 7.9612e-01 1.0000e+00 noCoverage 1.3031e-01 0.76097744 noCoverage 1.0000e+00 1.00000 noCoverage -6.1951e-03 8.9438e-01 lowCoverage 1.000000 lowCoverage 0.6210526 0.745342 -0.11077306 5 0.585388 0.701445 -0.1160570 9.0320e-01 6.1506e-02 insignificant 1.0000e+00 3.6394e-01 insignificant 6.3409e-01 3.1344e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0541594 4.9025e-01 lowCoverage 1.0000e+00 lowCoverage chr16 55969550 55970550 48849 CX3CL1 ENSG00000006210 0.7107703 175 6 0.754138 362 9 0.7073308 83 8 0.8428442 243 7 0.568783 115 7 0.718471 252 8 0.5958380 143 7 0.694634 116 8 0.7997747 70 7 0.9437500 42 6 0.778050 294 8 0.625000 40 3 0.8743056 57 4 0.7746032 65 4 0.893973 72 6 0.7777778 23 2 0.4782609 98 2 0.8180802 132 7 0.634603 117 7 0.735839 174 8 0.887401 45 4 1.0000000 34 3 0.820904 161 8 0.691938 79 7 0.7847673 260 7 0.6979031 264 8 0.707738 86 7 0.902597 27 2 0.7364453 122 7 0.772916 319 8 0.7834112 345 8 0.599435 210 7 0.8800054 186 8 0.7191983 133 6 0.688992 350 8 0.8616667 247 3 0.653780 167 7 0.7528697 262 9 0.6478404 223 7 0.6550480 224 8 0.8024508 236 7 0.7611111 87 6 0.684764 232 7 0.8143421 0.8389773 0.812627 0.8427737 0.6815117 0.8530236 0.7319410 0.8064246 0.8289919 0.9600671 0.875394 0.6554810 0.8948173 0.907958 0.8863655 0.8320886 NA 0.84048932 0.8437520 0.8689628 0.8742676 0.9441881 0.901946 0.660569 0.7853671 0.8507779 0.790412 0.903807 0.8568986 0.8795835 0.8650373 0.783973 0.87044220 0.7395083 0.71546465 0.86264831 0.7324149 0.8230265 0.8331184 0.8395078 0.847760 0.8099925 0.8797521 2 0.8208006 0.8483607 -0.00164229 7 0.675859 0.674484 0.00137458 0.850482 8.3159e-01 insignificant 1 1.0000e+00 insignificant 0.7928627 9.4006e-01 insignificant 1 1.0000e+00 insignificant -4.5780e-02 0.2724221 insignificant 1 insignificant 0.8303673 0.8156134 0.04439686 7 0.822465 0.767928 0.05453746 2.5942e-02 8.8718e-01 weaklyHypermeth 1.4657e-01 1.0000e+00 insignificant 6.4362e-02 9.9725e-01 insignificant 4.1524e-01 1.0000e+00 insignificant -0.02307732 6.2496e-01 insignificant 1.0000e+00 insignificant 0.820801 0.8173653 -0.0026704 7 0.675859 0.580222 0.09563694 1.1769e-01 8.2101e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.1744e-01 9.7441e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0260984 5.2854e-01 insignificant 1.0000000 insignificant 0.852214 0.8156134 0.0482320 8 0.812024 0.767928 4.4096e-02 9.0611e-02 8.3266e-01 insignificant 4.5305e-01 1.0000e+00 insignificant 1.2829e-01 9.9209e-01 insignificant 7.2071e-01 1.0000e+00 insignificant 0.0227026 6.5267e-01 insignificant 1.0000e+00 insignificant 0.8483607 0.8173653 -0.00097334 7 0.674484 0.580222 0.09426237 5.0498e-01 8.7558e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.6882e-01 0.94138360 insignificant 1.0000e+00 1.00000 insignificant 7.1878e-02 1.2723e-01 insignificant 1.000000 insignificant 0.8156134 0.828109 -0.04997689 7 0.767928 0.709160 0.0587679 8.0849e-01 2.1460e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.3699e-01 3.5780e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0491758 3.3808e-01 insignificant 1.0000e+00 insignificant chr16 56069950 56070950 48852 POLR2C ENSG00000102978 0.2494934 358 14 0.129601 139 14 0.5021387 77 4 0.2049707 304 14 0.421212 43 5 0.662067 230 14 0.4906410 96 9 0.438098 120 10 0.1643794 82 4 0.3106542 85 8 0.343231 235 9 0.402381 91 12 0.1383958 125 8 0.2870370 44 4 0.343477 150 13 0.4733333 38 2 0.1964286 34 4 0.2583380 605 9 0.227777 175 8 0.373922 256 14 0.401786 92 7 0.2504232 206 13 0.245841 115 9 0.394382 60 4 0.3499724 356 14 0.3536197 226 13 0.323864 148 12 0.125747 89 5 0.3363827 167 8 0.289495 247 13 0.1389798 239 13 0.400264 202 8 0.0000000 262 14 0.0585034 170 14 0.260204 51 2 0.0239070 826 14 0.120927 164 12 0.0373881 423 14 0.1379896 375 14 0.3261435 309 14 0.3053797 303 14 0.3715884 459 13 0.187367 253 14 0.2646340 0.1272701 0.440873 0.2089496 0.4586723 0.6822657 0.3729065 0.3832131 0.2049476 0.3976503 0.445619 0.2877747 0.1710576 0.307393 0.2247666 0.3268628 0.2597109 0.22577610 0.3003747 0.2721131 0.4841346 0.1405974 0.326578 0.322726 0.3487341 0.3028054 0.255305 0.223423 0.2893874 0.2479786 0.1020433 0.453237 0.00000000 0.0288462 NA 0.01360453 0.0881410 0.0613577 0.1094750 0.2071815 0.276668 0.2536964 0.1485960 3 0.3312005 0.2848485 0.03731398 8 0.294720 0.316092 -0.02137209 0.132766 9.7422e-01 insignificant 1 1.0000e+00 insignificant 0.7556027 9.8978e-01 insignificant 1 1.0000e+00 insignificant 2.9983e-02 0.4772110 insignificant 1 insignificant 0.3313014 0.0337909 0.29291602 8 0.309456 0.149808 0.15964763 6.4719e-20 1.0000e+00 hypermethylated 1.9789e-18 1.0000e+00 hypermethylated 5.8155e-14 1.0000e+00 hypermethylated 4.1540e-12 1.0000e+00 hypermethylated 0.24739050 3.3103e-04 hypermethylated 1.0345e-02 hypermethylated 0.331399 0.2408716 0.0872487 8 0.334737 0.283168 0.05156920 2.5798e-03 9.9476e-01 weaklyHypermeth 6.2923e-02 1.0000e+00 weaklyHypermeth 3.0640e-03 9.8276e-01 weaklyHypermeth 1.1114e-01 1.0000e+00 insignificant 0.0651852 2.6072e-01 insignificant 1.0000000 insignificant 0.284314 0.0332454 0.2452207 13 0.306897 0.099808 2.0709e-01 2.4364e-16 1.0000e+00 hypermethylated 7.6163e-15 1.0000e+00 hypermethylated 1.0649e-10 1.0000e+00 hypermethylated 7.0993e-09 1.0000e+00 hypermethylated 0.2174079 1.0507e-03 weaklyHypermeth 2.4292e-02 weaklyHypermeth 0.2844424 0.2408716 0.05450567 13 0.289871 0.283168 0.00670341 1.1419e-01 4.1710e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.3029e-02 0.51174239 insignificant 1.0000e+00 1.00000 insignificant 3.5203e-02 5.1830e-01 insignificant 1.000000 insignificant 0.0328216 0.240566 -0.21651005 14 0.066411 0.268712 -0.2023008 1.0000e+00 1.0888e-15 hypomethylated 1.0000e+00 6.0490e-14 hypomethylated 1.0000e+00 1.0375e-10 hypomethylated 1.0000e+00 1.2968e-08 hypomethylated -0.1822053 1.3732e-02 weaklyHypometh 2.0807e-01 insignificant chr16 56070350 56071350 48853 POLR2C ENSG00000102978 0.2201412 375 16 0.115201 149 15 0.4393714 88 6 0.1899063 328 16 0.370396 65 7 0.598883 246 16 0.4374434 120 11 0.402600 142 12 0.1527605 96 6 0.2795887 106 10 0.330658 256 11 0.352083 95 12 0.1199430 137 10 0.2674603 64 6 0.306792 169 15 0.3944444 49 4 0.1964286 34 4 0.2402819 630 11 0.210134 196 10 0.329931 275 16 0.351562 96 7 0.2191203 224 15 0.225354 118 9 0.350561 65 4 0.3174059 444 16 0.3183458 253 15 0.300866 166 14 0.112510 113 7 0.3040573 189 10 0.262781 278 15 0.1333244 259 15 0.364120 219 10 0.0000000 265 14 0.0511905 189 16 0.260204 51 2 0.0209186 860 16 0.112387 198 14 0.0384438 467 16 0.1226574 403 16 0.3094000 342 16 0.2880406 309 14 0.3457139 525 15 0.174374 279 16 0.2403663 0.1155990 0.400444 0.1971783 0.4245503 0.6306169 0.3424049 0.3611718 0.1930154 0.3611845 0.426588 0.2613849 0.1553711 0.293178 0.2089583 0.2968885 0.2415428 0.21313822 0.2815630 0.2471595 0.4397380 0.1277042 0.297707 0.293131 0.3219684 0.2818993 0.242498 0.202935 0.2672165 0.2283573 0.1014192 0.422348 0.00054585 0.0262009 NA 0.01235695 0.0830604 0.0599158 0.0994358 0.2047505 0.265853 0.2443188 0.1416875 3 0.3073306 0.2584641 0.03552031 10 0.275314 0.293101 -0.01778700 0.112242 9.8736e-01 insignificant 1 1.0000e+00 insignificant 0.7480444 9.9377e-01 insignificant 1 1.0000e+00 insignificant 2.6055e-02 0.4817765 insignificant 1 insignificant 0.3074156 0.0330375 0.27044673 10 0.287829 0.138215 0.14961360 5.7975e-20 1.0000e+00 hypermethylated 1.8702e-18 1.0000e+00 hypermethylated 9.3296e-14 1.0000e+00 hypermethylated 6.2197e-12 1.0000e+00 hypermethylated 0.21719852 9.5342e-04 hypermethylated 2.3836e-02 hypermethylated 0.307458 0.2304793 0.0748528 10 0.305494 0.265053 0.04044173 6.6668e-03 9.1830e-01 weaklyHypermeth 1.3074e-01 1.0000e+00 insignificant 7.1456e-03 8.5831e-01 weaklyHypermeth 1.9312e-01 1.0000e+00 insignificant 0.0496854 3.5554e-01 insignificant 1.0000000 insignificant 0.257958 0.0325283 0.2213516 15 0.283697 0.092761 1.9094e-01 2.4372e-16 1.0000e+00 hypermethylated 7.6163e-15 1.0000e+00 hypermethylated 1.8480e-10 1.0000e+00 hypermethylated 1.1550e-08 1.0000e+00 hypermethylated 0.1911435 2.4986e-03 weaklyHypermeth 4.4617e-02 weaklyHypermeth 0.2579842 0.2304793 0.04114593 15 0.263407 0.265053 -0.00164524 2.0648e-01 8.4570e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 1.3811e-01 0.21969251 insignificant 1.0000e+00 1.00000 insignificant 2.3630e-02 6.4375e-01 insignificant 1.000000 insignificant 0.0321305 0.230189 -0.20723977 16 0.061220 0.251232 -0.1900126 1.0000e+00 1.0442e-16 hypomethylated 1.0000e+00 6.5263e-15 hypomethylated 1.0000e+00 5.8449e-11 hypomethylated 1.0000e+00 8.3499e-09 hypomethylated -0.1675132 1.8251e-02 weaklyHypometh 2.4334e-01 insignificant chr16 56214450 56215450 48861 ENSG00000213472 0.8374454 279 7 0.876847 273 7 0.7144558 144 7 0.8389444 178 7 0.813832 84 6 0.766349 310 7 0.8854409 162 7 0.911886 233 7 0.6657549 133 7 0.8276322 135 7 0.841977 256 7 0.827694 86 4 0.8565692 137 7 0.9166667 34 3 0.782051 133 6 0.9836601 61 4 0.6708333 55 4 0.9045449 208 7 0.852844 214 7 0.853075 220 7 0.983045 117 7 0.9474490 37 4 0.896684 185 7 0.939157 121 7 0.7992063 49 6 0.8721757 327 7 0.818276 91 7 0.765351 66 4 0.8565313 201 7 0.863027 336 7 0.8636171 385 7 0.897740 308 7 0.8918516 225 7 0.9423693 175 7 0.938390 235 6 0.7366162 50 4 0.902724 114 7 0.9273785 386 7 0.7950051 181 7 0.7862514 246 7 0.8656788 309 7 0.8788938 233 7 0.927853 207 7 0.8731806 0.8753676 0.737515 0.8623026 0.8700007 0.9052010 0.9089620 0.9447854 0.7319534 0.8672925 0.878200 0.8525526 0.8692545 0.877165 0.8347889 0.9720581 0.6764495 0.91717217 0.8612046 0.8896989 0.9749019 0.9179663 0.926787 0.944356 0.8029597 0.8815274 0.868718 0.908948 0.8797615 0.8844474 0.8936706 0.931637 0.91602727 0.9199495 0.93415450 0.77114236 0.9013240 0.9306452 0.9110469 0.9199707 0.858619 0.9013544 0.9510107 4 0.8485757 0.8807917 -0.03084117 7 0.834220 0.867577 -0.03335718 0.995849 2.5350e-02 weaklyHypometh 1 8.3373e-01 insignificant 0.9867116 1.3268e-02 weaklyHypometh 1 7.3712e-01 insignificant -4.3763e-02 0.0982229 insignificant 1 insignificant 0.8486941 0.9181435 -0.06815686 7 0.846251 0.909789 -0.06353802 9.3916e-01 3.8768e-05 weaklyHypometh 1.0000e+00 5.5383e-03 weaklyHypometh 9.7618e-01 2.7328e-03 weaklyHypometh 1.0000e+00 2.2773e-01 insignificant -0.05846312 1.4526e-01 insignificant 9.8146e-01 insignificant 0.848576 0.8826531 -0.0431632 7 0.834220 0.822203 0.01201733 9.6181e-01 1.3802e-02 weaklyHypometh 1.0000e+00 3.7279e-01 insignificant 9.8114e-01 1.7653e-02 weaklyHypometh 1.0000e+00 4.6456e-01 insignificant -0.0193112 5.6470e-01 insignificant 1.0000000 insignificant 0.880974 0.9181435 -0.0386414 7 0.877231 0.909789 -3.2558e-02 6.0777e-01 4.1945e-03 weaklyHypometh 1.0000e+00 3.8132e-01 insignificant 8.8798e-01 2.7130e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0147001 6.9761e-01 insignificant 1.0000e+00 insignificant 0.8807917 0.8826531 -0.00931369 7 0.867577 0.822203 0.04537451 8.2752e-01 3.3321e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.4886e-01 0.60931198 insignificant 1.0000e+00 1.00000 insignificant 2.4452e-02 4.7058e-01 insignificant 1.000000 insignificant 0.9181435 0.884058 0.03717160 7 0.909789 0.892041 0.0177483 2.6556e-02 6.8092e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 1.0830e-01 8.2307e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0391519 3.6951e-01 insignificant 1.0000e+00 insignificant chr16 56454850 56455850 48879 ENSG00000206833 0.0560641 85 4 0.104091 176 5 0.1032895 131 5 0.0700000 59 4 0.137561 111 5 0.128669 163 5 0.0921519 151 5 0.076473 98 5 0.0989944 141 5 0.1582051 93 5 0.189842 163 5 0.175013 83 5 0.0798176 112 5 0.0980392 44 3 0.052812 158 5 0.1534722 77 5 0.1112332 62 3 0.0671053 45 3 0.154893 112 5 0.130845 186 5 0.000000 18 3 0.1015152 40 3 0.212903 110 4 0.071385 51 3 0.1203704 22 3 0.0755366 185 5 0.069444 83 4 0.043333 53 3 0.3279624 86 3 0.088537 182 5 0.1102626 157 5 0.231801 203 5 0.0000000 154 5 0.0000000 56 3 0.081250 233 5 0.0000000 12 1 0.079212 112 4 0.0478571 108 5 0.1509158 90 4 0.0876068 85 4 0.1488095 59 4 0.0064516 62 3 0.063793 65 4 0.1324665 0.0930992 0.101128 0.0912121 0.1125467 0.1394914 0.1272054 0.0588360 0.0836264 0.1220435 0.200488 0.2561629 0.0794971 0.131241 0.0325605 0.1525042 0.0538566 0.15474482 0.1180109 0.0834363 0.0000000 0.0467860 0.115868 0.178200 0.1844552 0.0898872 0.091162 0.087172 0.1544543 0.0780838 0.1097141 0.277215 0.00000000 0.0000000 0.01231061 0.00053333 0.0293425 0.0800216 0.0787657 0.0500777 0.144949 0.0177908 0.0486416 2 0.1151111 0.1243697 -0.01392951 5 0.113804 0.121647 -0.00784260 0.902342 2.1932e-01 insignificant 1 1.0000e+00 insignificant 0.4568483 6.2544e-01 insignificant 1 1.0000e+00 insignificant -9.1589e-03 0.7487157 lowCoverage 1 lowCoverage 0.1151111 0.0296296 0.08607553 5 0.113804 0.048665 0.06513915 2.6584e-05 9.9058e-01 weaklyHypermeth 2.5561e-04 1.0000e+00 weaklyHypermeth 1.4957e-05 9.9975e-01 weaklyHypermeth 2.8764e-04 1.0000e+00 weaklyHypermeth 0.07720874 2.9281e-03 lowCoverage 4.9629e-02 lowCoverage 0.115111 0.0803324 0.0319523 4 0.113804 0.092114 0.02168983 5.1511e-02 4.3623e-01 lowCoverage 7.2551e-01 1.0000e+00 lowCoverage 8.9809e-02 5.8863e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0204132 5.0892e-01 lowCoverage 1.0000000 lowCoverage 0.124370 0.0296296 0.0984052 5 0.121647 0.048665 7.2982e-02 6.7877e-05 9.9361e-01 weaklyHypermeth 6.5266e-04 1.0000e+00 weaklyHypermeth 5.8812e-04 9.9993e-01 weaklyHypermeth 8.9109e-03 1.0000e+00 weaklyHypermeth 0.0863677 1.3592e-02 lowCoverage 1.6990e-01 lowCoverage 0.1243697 0.0803324 0.04885220 4 0.121647 0.092114 0.02953242 1.7891e-01 7.3967e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 1.7623e-01 0.54530332 lowCoverage 1.0000e+00 1.00000 lowCoverage 2.9572e-02 4.5250e-01 lowCoverage 1.000000 lowCoverage 0.0296296 0.080332 -0.06379976 4 0.048665 0.092114 -0.0434493 9.6029e-01 7.3637e-03 lowCoverage 1.0000e+00 6.2404e-02 lowCoverage 9.9176e-01 1.0016e-01 lowCoverage 1.0000e+00 6.6010e-01 lowCoverage -0.0567955 1.1849e-01 lowCoverage 8.7769e-01 lowCoverage chr16 56523550 56524550 48886 ENSG00000222381 0.8496539 548 7 0.849984 171 9 0.8375661 99 9 0.8479972 433 7 0.837393 84 5 0.774114 444 10 0.8191358 157 8 0.929825 123 9 0.7809091 67 6 0.9482131 61 6 0.844512 312 9 0.735043 37 2 0.9583333 57 5 0.7762897 61 6 0.866667 72 6 0.8000000 44 5 0.9096222 496 2 0.8576516 314 7 0.825512 309 7 0.670321 427 7 0.866667 71 6 0.7222222 13 0 0.852230 250 8 0.886580 95 6 0.7948980 35 5 0.8786897 255 10 0.787557 75 6 0.708333 45 4 0.6802381 176 6 0.787992 191 10 0.8452283 449 10 0.846805 582 10 0.8073298 135 7 0.7115079 85 6 0.842562 291 10 0.6944444 30 3 0.838390 96 6 0.6777476 546 10 0.6604058 599 10 0.8555359 804 10 0.8329014 405 10 0.7042096 354 7 0.840882 414 10 0.7302375 0.7900548 0.840489 0.7833419 0.7788163 0.7302994 0.7555969 0.8235813 0.8207889 0.9022118 0.797397 0.8113013 0.9182961 0.826749 0.8335303 0.7975175 0.8911279 0.75608149 0.8010422 0.7089579 0.7602421 0.4134078 0.774705 0.748973 0.7614731 0.7571475 0.786172 0.711359 0.7736765 0.8061536 0.7745533 0.699399 0.68689927 0.6114126 0.80288439 0.69313811 0.7860058 0.6723249 0.7755384 0.7920007 0.796022 0.7079736 0.7600339 2 0.8634994 0.8538221 0.02520057 7 0.824442 0.848932 -0.02448974 0.189919 6.4333e-01 insignificant 1 1.0000e+00 insignificant 0.4188319 5.2169e-01 insignificant 1 1.0000e+00 insignificant 3.1150e-02 0.2356582 insignificant 1 insignificant 0.8634361 0.7945900 0.08517702 7 0.811903 0.735818 0.07608489 9.1497e-05 8.9922e-01 weaklyHypermeth 7.9563e-04 1.0000e+00 weaklyHypermeth 5.2893e-02 8.8684e-01 insignificant 3.6366e-01 1.0000e+00 insignificant 0.07394017 6.6230e-02 insignificant 5.4736e-01 insignificant 0.863499 0.8959627 0.0191226 7 0.824442 0.810706 0.01373617 5.6202e-01 2.3918e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6296e-02 8.3467e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0571502 2.3935e-01 insignificant 1.0000000 insignificant 0.853626 0.7945900 0.0543882 7 0.838142 0.735818 1.0232e-01 1.5669e-02 9.7662e-01 weaklyHypermeth 9.4965e-02 1.0000e+00 weaklyHypermeth 4.3296e-01 9.7107e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0427897 2.7477e-01 insignificant 1.0000e+00 insignificant 0.8538221 0.8959627 -0.01880945 7 0.848932 0.810706 0.03822592 8.7114e-01 2.8995e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.6173e-01 0.94512156 insignificant 1.0000e+00 1.00000 insignificant 2.6000e-02 5.8362e-01 insignificant 1.000000 insignificant 0.7945900 0.895882 -0.08268981 7 0.735818 0.797185 -0.0613676 9.8673e-01 4.1182e-02 weaklyHypometh 1.0000e+00 2.6916e-01 insignificant 7.4228e-01 5.3360e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0167899 7.4889e-01 insignificant 1.0000e+00 insignificant chr16 57080250 57081250 48903 NDRG4 ENSG00000103034 0.7550000 153 5 0.626756 69 5 0.7388258 95 5 0.8388972 68 3 0.621703 48 5 0.816819 167 5 0.7389532 114 5 0.801026 70 5 0.7817857 104 5 0.7715152 63 5 0.700806 116 5 0.653518 90 5 0.6969697 83 5 NA 0 0 0.740713 104 5 0.7217143 91 5 0.7769231 73 5 0.8082251 90 5 0.774167 86 5 0.821662 124 5 0.846667 39 5 0.7100000 33 3 0.824675 116 5 0.861667 58 5 0.8350000 23 3 0.8064747 114 5 0.682564 42 2 0.708485 30 3 0.6712381 71 5 0.800176 88 5 0.6373077 113 5 0.707333 255 5 0.6938706 102 5 0.7217949 68 5 0.560000 17 3 0.7034921 61 5 0.850739 74 5 0.7698758 71 5 0.8172810 171 5 0.8561310 142 5 0.7756667 118 5 0.8127819 110 5 0.860714 105 5 0.7485537 0.6250860 0.727080 0.8228671 0.5955749 0.8099895 0.7294153 0.7932613 0.7643595 0.7558978 0.684407 0.6288102 0.6750563 NA 0.7233991 0.7081385 0.7639179 0.79279811 0.7629132 0.8147551 0.8371901 0.6943526 0.812654 0.848416 0.8192149 0.7978215 0.674952 0.701302 0.6509563 0.7875861 0.6099105 0.702660 0.68755790 0.7117504 0.56198347 0.71069133 0.8498148 0.7554412 0.8022903 0.8471591 0.762107 0.7988069 0.8549292 2 0.7704646 0.7749491 0.00064592 5 0.757323 0.758060 -0.00073614 0.665578 6.9720e-01 insignificant 1 1.0000e+00 insignificant 0.9185414 3.1423e-01 insignificant 1 1.0000e+00 insignificant -1.1002e-02 0.6884961 lowCoverage 1 lowCoverage 0.7704646 0.7659033 0.01241533 5 0.757323 0.752576 0.00474784 4.1807e-01 6.7416e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.2219e-01 4.4727e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03000176 4.9840e-01 lowCoverage 1.0000e+00 lowCoverage 0.770465 0.7987616 -0.0682071 5 0.757323 0.825002 -0.06767902 9.9966e-01 1.2949e-03 weaklyHypometh 1.0000e+00 8.6325e-02 weaklyHypometh 9.9984e-01 5.7542e-04 weaklyHypometh 1.0000e+00 6.1281e-02 weaklyHypometh -0.0778845 3.3942e-03 lowCoverage 0.1094889 lowCoverage 0.774949 0.7659033 0.0112391 5 0.758060 0.752576 5.4840e-03 5.0355e-01 7.1873e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.5800e-01 7.5537e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0410036 3.9038e-01 lowCoverage 1.0000e+00 lowCoverage 0.7749491 0.7987616 -0.06865183 5 0.758060 0.825002 -0.06694288 9.9822e-01 4.9811e-03 weaklyHypometh 1.0000e+00 3.0950e-01 insignificant 9.9855e-01 0.02875559 weaklyHypometh 1.0000e+00 1.00000 insignificant -6.6883e-02 2.8654e-02 lowCoverage 0.666371 lowCoverage 0.7659033 0.798762 -0.08136761 5 0.752576 0.825002 -0.0724269 9.8877e-01 4.2419e-02 weaklyHypometh 1.0000e+00 2.7367e-01 insignificant 9.9284e-01 2.5259e-02 weaklyHypometh 1.0000e+00 2.3830e-01 insignificant -0.1078863 4.0104e-02 lowCoverage 4.0922e-01 lowCoverage chr16 58471050 58472050 48932 ENSG00000200911 0.9047619 49 4 0.678818 93 5 0.7066277 59 5 0.8720000 63 5 0.472475 69 5 0.650758 64 5 0.5760000 44 4 0.681818 49 4 0.8200000 30 5 0.8166667 45 5 0.792381 149 5 0.583333 15 1 0.7386364 59 5 0.7916667 30 4 0.819714 51 2 0.5600000 12 1 1.0000000 8 0 0.7514881 42 2 0.816667 61 5 0.545635 63 5 1.000000 27 2 1.0000000 10 1 0.808333 48 5 0.900000 26 1 0.9333333 33 1 0.7803030 106 5 0.700000 25 2 1.000000 7 1 0.7199872 61 4 0.666667 60 5 0.7651042 84 5 0.772312 72 5 0.8180023 104 5 0.5629371 69 5 0.820125 110 5 0.4166667 12 0 0.481481 60 4 0.6711223 103 5 0.7090000 52 4 0.7794613 59 5 0.7131579 80 4 0.7833333 35 4 0.835173 62 4 0.9751553 0.8621445 0.683575 0.9495652 0.9197958 0.8702899 0.7776812 0.9782609 0.9000000 0.8985507 0.817622 0.9499133 0.8595850 0.969334 0.9152795 0.7804348 0.9770872 0.89958592 0.9782609 0.8222050 0.9824140 0.9824140 0.882246 0.994565 0.9855072 0.9723791 0.945652 0.982414 0.9351782 0.9782609 0.9876812 0.829985 0.80417109 0.7406507 0.94495761 0.79430773 0.7794686 0.8509044 0.9067391 0.9431269 0.979634 0.9826087 0.9103291 1 0.7817837 0.8443649 -0.05649048 5 0.490525 0.705352 -0.21482717 0.989476 5.4393e-02 insignificant 1 1.0000e+00 insignificant 0.9831486 3.8869e-02 weaklyHypometh 1 1.0000e+00 insignificant -1.0820e-01 0.0292840 lowCoverage 1 lowCoverage 0.7847619 0.7314410 0.04668301 5 0.735787 0.641095 0.09469184 2.3221e-02 7.2594e-01 weaklyHypermeth 1.3501e-01 1.0000e+00 insignificant 1.7157e-02 8.9417e-01 weaklyHypermeth 1.4418e-01 1.0000e+00 insignificant 0.10058314 2.2662e-01 lowCoverage 1.0000e+00 lowCoverage 0.784762 0.7916667 -0.0277614 4 0.735787 0.743270 -0.00748275 7.8738e-01 8.1666e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.9227e-01 1.5664e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0350528 3.7496e-01 lowCoverage 1.0000000 lowCoverage 0.845324 0.7314410 0.0980350 5 0.724694 0.641095 8.3599e-02 2.9931e-03 9.8825e-01 weaklyHypermeth 2.2171e-02 1.0000e+00 weaklyHypermeth 2.4703e-03 9.9934e-01 weaklyHypermeth 2.6285e-02 1.0000e+00 weaklyHypermeth 0.2087809 2.9225e-02 lowCoverage 3.0394e-01 lowCoverage 0.8453237 0.7916667 0.01833060 4 0.724694 0.743270 -0.01857533 5.4047e-01 6.1296e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 5.0955e-01 0.80229255 lowCoverage 1.0000e+00 1.00000 lowCoverage 7.3145e-02 1.0858e-01 lowCoverage 1.000000 lowCoverage 0.7314410 0.791667 -0.08468133 4 0.641095 0.743270 -0.1021746 9.9705e-01 7.5658e-03 lowCoverage 1.0000e+00 6.3578e-02 lowCoverage 9.9965e-01 1.8152e-02 lowCoverage 1.0000e+00 1.7972e-01 lowCoverage -0.1356359 1.1357e-01 lowCoverage 8.5392e-01 lowCoverage chr16 60619550 60620550 48952 ENSG00000201289 0.7318182 54 5 0.585714 36 4 0.6166667 27 1 0.8398962 75 5 0.816667 21 1 0.724704 149 5 0.5200000 20 1 0.519864 89 5 0.7000000 10 0 0.7466667 26 4 0.687383 133 5 0.533333 14 0 0.6750000 44 5 0.5000000 20 1 0.800000 21 1 0.2000000 18 0 0.5000000 6 0 0.6340852 49 5 0.857143 33 1 0.748975 155 6 0.780000 18 1 0.8380952 19 1 0.686594 43 1 0.806667 27 5 0.6547619 29 3 0.7537353 91 6 0.716017 32 3 0.500000 13 1 0.5846154 26 1 0.606209 73 5 0.8234702 58 5 0.703274 106 6 0.6654762 38 4 0.5743506 42 5 0.764881 49 6 0.7777778 20 0 0.518636 47 5 0.7348485 71 5 0.6547619 50 5 0.7616422 76 5 0.6444250 95 6 0.4246032 23 1 0.643926 94 6 0.7588384 0.6027967 0.658730 0.8235508 0.8161376 0.7497017 0.5928571 0.5789929 0.7380952 0.7629630 0.712777 0.6031746 0.7063492 0.579365 0.8306878 0.3174603 0.4761905 0.61821220 0.8737717 0.7899817 0.8095238 0.8382464 0.700656 0.810582 0.7038927 0.7523449 0.736687 0.579365 0.6316646 0.5956012 0.8085940 0.719983 0.71324641 0.6114976 0.74801587 0.77248677 0.5617244 0.7301587 0.6473923 0.7562442 0.661154 0.5389267 0.6732668 0 0.7130000 0.7588785 -0.01297380 5 0.703000 0.721594 -0.01859455 0.815034 3.6298e-01 insignificant 1 1.0000e+00 insignificant 0.8050466 3.6662e-01 insignificant 1 1.0000e+00 insignificant -5.7557e-02 0.2220279 lowCoverage 1 lowCoverage 0.7130000 0.6928839 0.02929113 5 0.703000 0.699326 0.00367359 3.5602e-01 4.0830e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.7830e-01 6.5090e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02576593 6.5272e-01 lowCoverage 1.0000e+00 lowCoverage 0.713000 0.6775148 0.0374782 5 0.703000 0.654425 0.04857513 2.4902e-01 8.4672e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.2194e-01 9.4632e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0210241 7.5565e-01 lowCoverage 1.0000000 lowCoverage 0.758879 0.6928839 0.0345542 5 0.721594 0.699326 2.2268e-02 1.9598e-01 3.7358e-01 insignificant 9.1581e-01 1.0000e+00 insignificant 3.9896e-01 5.6991e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0317915 5.6146e-01 lowCoverage 1.0000e+00 lowCoverage 0.7588785 0.6775148 0.04352853 5 0.721594 0.654425 0.06716968 1.3385e-01 9.4762e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.3913e-01 0.97164385 insignificant 1.0000e+00 1.00000 insignificant 7.8582e-02 2.5279e-01 lowCoverage 1.000000 lowCoverage 0.6928839 0.677515 0.01409828 5 0.699326 0.654425 0.0449015 2.7848e-01 8.8397e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.7495e-01 9.6643e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0467900 5.2328e-01 lowCoverage 1.0000e+00 lowCoverage chr16 61718950 61719950 48957 ENSG00000223123 0.7764398 141 6 0.831848 95 6 0.7222222 59 3 0.8228286 109 6 0.842593 43 4 0.809363 293 6 0.8465959 79 6 0.882331 67 5 0.7460450 65 3 0.7939066 80 5 0.892722 108 5 0.769630 47 3 0.9166667 73 5 NA 0 0 0.914263 71 5 0.8968254 24 3 0.9298469 38 3 0.7839288 117 6 0.903680 100 6 0.823823 298 6 0.805556 34 4 0.7383650 77 6 0.773962 85 6 0.778055 54 4 0.9623016 63 4 0.8232364 117 6 0.746882 74 5 0.819444 23 2 0.7135185 67 6 0.792037 115 6 0.8466653 95 5 0.838393 286 6 0.7204674 97 6 0.7397059 78 5 0.700611 96 6 0.7287157 46 5 0.680303 45 5 0.8745561 128 6 0.8679337 154 6 0.8432793 165 6 0.8668929 117 6 0.8546140 131 6 0.821065 138 6 0.8542347 0.7900353 0.816794 0.8116487 0.7547710 0.8734633 0.7594846 0.9002657 0.7888120 0.9170828 0.901563 0.7195420 0.8753181 NA 0.8740458 0.9033634 0.8832470 0.77628308 0.8932785 0.8704036 0.8333333 0.7156991 0.820559 0.810041 0.9741003 0.8862833 0.790894 0.780534 0.8239355 0.8380439 0.8524699 0.863765 0.67276073 0.7193309 0.69697478 0.70381638 0.6913072 0.8713989 0.8701174 0.8615726 0.894452 0.8816772 0.8427965 3 0.8521238 0.8385321 0.00749183 6 0.847516 0.836279 0.01123755 0.684972 8.8518e-01 insignificant 1 1.0000e+00 insignificant 0.5179974 9.3160e-01 insignificant 1 1.0000e+00 insignificant 3.3933e-02 0.1627750 lowCoverage 1 lowCoverage 0.8521238 0.7428571 0.09849905 6 0.847516 0.779151 0.06836578 4.9812e-05 9.9403e-01 weaklyHypermeth 4.5699e-04 1.0000e+00 weaklyHypermeth 1.8811e-03 9.9997e-01 weaklyHypermeth 2.0227e-02 1.0000e+00 weaklyHypermeth 0.09640804 1.6224e-02 lowCoverage 1.8865e-01 lowCoverage 0.851657 0.8751773 -0.0248586 6 0.822102 0.850698 -0.02859609 9.5322e-01 1.1821e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.6336e-01 4.4685e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0136223 4.2420e-01 lowCoverage 1.0000000 lowCoverage 0.838532 0.7428571 0.0907197 6 0.836279 0.779151 5.7128e-02 4.7038e-03 9.8223e-01 weaklyHypermeth 3.2440e-02 1.0000e+00 weaklyHypermeth 1.9571e-02 9.8431e-01 weaklyHypermeth 1.5410e-01 1.0000e+00 insignificant 0.0624748 9.5453e-02 insignificant 6.6751e-01 insignificant 0.8380865 0.8751773 -0.03321375 6 0.808992 0.850698 -0.04170656 9.7320e-01 1.1627e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8728e-01 0.14108546 insignificant 1.0000e+00 1.00000 insignificant -4.7556e-02 3.6381e-02 weaklyHypometh 0.727612 insignificant 0.7418033 0.875177 -0.11906211 6 0.742342 0.850698 -0.1083562 9.9511e-01 5.6688e-04 weaklyHypometh 1.0000e+00 6.3714e-03 weaklyHypometh 9.9882e-01 1.5772e-03 weaklyHypometh 1.0000e+00 2.8676e-02 weaklyHypometh -0.1100304 9.8457e-03 weaklyHypometh 1.6688e-01 insignificant chr16 65107550 65108550 48971 ENSG00000166546 0.9271777 395 9 0.840510 321 10 0.8849966 259 9 0.9303023 375 10 0.841393 132 10 0.928685 564 10 0.8142082 184 10 0.897930 276 10 0.8347242 237 9 0.8963983 240 9 0.838110 345 10 0.846495 122 9 0.8853827 360 10 0.8720384 149 6 0.824248 306 9 0.7256660 93 8 0.7915873 87 7 0.7980429 571 9 0.922904 273 9 0.915589 415 10 0.879722 132 9 0.8996299 208 9 0.924504 319 9 0.806871 166 9 0.8670396 142 9 0.8975497 378 10 0.870905 207 9 0.838309 182 10 0.7903729 235 9 0.901929 327 10 0.8914515 298 9 0.890827 551 10 0.1586127 340 10 0.0234819 169 9 0.062500 169 7 0.7156811 100 7 0.080410 340 8 0.8247838 313 10 0.9445138 427 9 0.9467750 419 9 0.9396602 586 9 0.8846152 354 9 0.833663 380 9 0.9116395 0.8236089 0.879925 0.9141950 0.8072877 0.9212604 0.8292700 0.8931373 0.8014458 0.8830538 0.850838 0.8534776 0.8715858 0.859180 0.8074895 0.7461648 0.7286221 0.76780870 0.9043188 0.9017925 0.8890348 0.8916680 0.911359 0.804483 0.8686338 0.8824173 0.846891 0.830764 0.8036003 0.8876970 0.8755991 0.884759 0.19440486 0.0249728 0.14066648 0.56824588 0.0637540 0.8123155 0.9435949 0.9366859 0.919603 0.8864553 0.8440035 9 0.8606241 0.8680445 -0.01042771 9 0.869750 0.876690 -0.00693984 0.882755 2.5185e-01 insignificant 1 1.0000e+00 insignificant 0.8203786 1.8878e-01 insignificant 1 1.0000e+00 insignificant -1.0773e-02 0.5296873 insignificant 1 insignificant 0.8606241 0.2990915 0.55901842 10 0.869750 0.302944 0.56680640 1.2564e-49 1.0000e+00 hypermethylated 1.0470e-47 1.0000e+00 hypermethylated 5.2296e-15 1.0000e+00 hypermethylated 4.3580e-13 1.0000e+00 hypermethylated 0.54990785 1.3273e-02 weaklyHypermeth 1.6386e-01 insignificant 0.860624 0.9118190 -0.0482854 9 0.869750 0.918649 -0.04889882 9.9994e-01 5.8515e-04 weaklyHypometh 1.0000e+00 5.4166e-02 weaklyHypometh 9.9977e-01 4.0037e-04 weaklyHypometh 1.0000e+00 5.7875e-02 weaklyHypometh -0.0490259 9.6989e-02 insignificant 0.9998821 insignificant 0.868045 0.2990915 0.5675296 9 0.876690 0.302944 5.7375e-01 6.5926e-32 1.0000e+00 hypermethylated 4.1204e-30 1.0000e+00 hypermethylated 2.0367e-14 1.0000e+00 hypermethylated 2.0367e-12 1.0000e+00 hypermethylated 0.5606809 1.2318e-02 weaklyHypermeth 1.6208e-01 insignificant 0.8680445 0.9118190 -0.03994747 9 0.876690 0.918649 -0.04195898 9.9998e-01 3.3066e-03 weaklyHypometh 1.0000e+00 2.9722e-01 insignificant 9.9998e-01 0.00295593 weaklyHypometh 1.0000e+00 0.36150 insignificant -3.8253e-02 1.7599e-01 insignificant 1.000000 insignificant 0.2990915 0.911819 -0.60749031 9 0.302944 0.918649 -0.6157052 1.0000e+00 2.0137e-15 hypomethylated 1.0000e+00 1.0599e-13 hypomethylated 1.0000e+00 3.1978e-10 hypomethylated 1.0000e+00 3.5531e-08 hypomethylated -0.5989338 9.1665e-03 weaklyHypometh 1.6363e-01 insignificant chr16 65463950 65464950 48986 CA7 ENSG00000168748 0.0080123 681 11 0.000000 445 11 0.0110639 443 11 0.0044327 602 11 0.086806 186 11 0.185130 743 11 0.0120634 477 11 0.086622 374 11 0.0044753 512 11 0.0153391 460 11 0.025928 346 11 0.017993 381 11 0.0153392 367 11 NA 0 0 0.009575 476 11 0.0055096 264 11 0.0074190 486 11 0.0010288 627 11 0.087121 233 11 0.133580 671 11 0.019496 135 11 0.0850694 529 11 0.011226 460 11 0.000000 161 10 0.0032468 297 11 0.0022242 646 11 0.018274 291 11 0.014815 162 11 0.0075758 329 11 0.088474 592 11 0.0095344 585 11 0.085644 827 11 0.0055200 391 11 0.0110430 325 11 0.000000 34 3 0.0050505 214 11 0.011905 160 11 0.0846354 458 11 0.0073511 877 11 0.0085653 747 11 0.0050275 1002 11 0.0026826 797 11 0.082714 932 11 0.0097127 0.0000000 0.012769 0.0049678 0.0026472 0.0084027 0.0109800 0.0058283 0.0034722 0.0163258 0.023543 0.0162576 0.0167657 NA 0.0092078 0.0046975 0.0140942 0.00098828 0.0038697 0.0080594 0.0254959 0.0015089 0.016525 0.000000 0.0030405 0.0038860 0.018412 0.012989 0.0056826 0.0037496 0.0080002 0.011946 0.01060334 0.0175345 0.00064041 0.00331780 0.0090761 0.0015486 0.0060340 0.0075940 0.004814 0.0027862 0.0141289 11 0.0098095 0.0089749 0.00087212 11 0.044704 0.034649 0.01005484 0.791640 9.5653e-01 insignificant 1 1.0000e+00 insignificant 0.7055796 9.9112e-01 insignificant 1 1.0000e+00 insignificant 8.9616e-03 0.5743370 insignificant 1 insignificant 0.0098129 0.0069532 0.00324469 11 0.055880 0.032882 0.02299845 1.2605e-01 9.7123e-01 insignificant 6.1190e-01 1.0000e+00 insignificant 7.3137e-02 9.9935e-01 insignificant 4.6584e-01 1.0000e+00 insignificant 0.01806760 3.2727e-01 insignificant 1.0000e+00 insignificant 0.010262 0.0078071 0.0015628 11 0.105040 0.077368 0.02767248 2.9385e-01 4.4834e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.7483e-01 4.6509e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0164917 4.1944e-01 insignificant 1.0000000 insignificant 0.008982 0.0069532 0.0021332 11 0.043312 0.032882 1.0430e-02 2.8183e-01 9.3203e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.0560e-01 9.9121e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0091060 5.9416e-01 insignificant 1.0000e+00 insignificant 0.0089802 0.0075792 0.00125893 11 0.039980 0.006396 0.03358401 5.6829e-01 8.5089e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3590e-01 0.40175992 insignificant 1.0000e+00 1.00000 insignificant 7.5301e-03 6.9432e-01 insignificant 1.000000 insignificant 0.0069532 0.007581 -0.00114145 11 0.032882 0.006929 0.0259528 8.5212e-01 8.7546e-02 insignificant 1.0000e+00 4.8908e-01 insignificant 9.9454e-01 5.8660e-02 insignificant 1.0000e+00 4.4439e-01 insignificant -0.0015759 9.3971e-01 insignificant 1.0000e+00 insignificant chr16 65613050 65614050 48993 ENSG00000222907 0.6314965 272 9 0.630905 251 9 0.6295647 177 9 0.6441992 196 9 0.624769 157 9 0.632779 460 9 0.5602934 199 9 0.563016 204 9 0.7023222 178 9 0.5841769 203 9 0.670374 332 9 0.599339 133 9 0.6110695 164 9 0.7515152 68 6 0.723984 207 9 0.5836460 107 9 0.5654360 387 9 0.6364728 212 9 0.586061 216 9 0.650737 394 9 0.722218 104 8 0.6026887 200 9 0.613753 206 9 0.630089 153 9 0.6126543 128 9 0.6067378 263 9 0.655838 151 9 0.664537 111 9 0.5952070 150 9 0.657390 267 9 0.6075259 307 9 0.622954 521 9 0.5952037 226 9 0.5633515 129 7 0.592173 239 9 0.8197412 91 7 0.614376 139 9 0.5635758 286 9 0.6690948 182 9 0.6641160 278 9 0.6208615 248 9 0.6845941 183 9 0.715543 215 9 0.6701503 0.6699651 0.663184 0.6787709 0.6612775 0.6772360 0.5975119 0.6704743 0.7242818 0.6785665 0.700428 0.6331951 0.6515250 0.731754 0.7521509 0.6177221 0.6025879 0.68637220 0.6811397 0.6903402 0.7238162 0.6396974 0.656288 0.730391 0.6469645 0.6393760 0.689755 0.719435 0.6843372 0.6936442 0.6423097 0.704723 0.61304884 0.5886151 0.67975214 0.83584677 0.6538315 0.6643328 0.6994380 0.7012276 0.721145 0.7232424 0.7499752 9 0.6694709 0.6759078 0.00315344 9 0.581891 0.593054 -0.01116369 0.612160 5.1921e-01 insignificant 1 1.0000e+00 insignificant 0.7620694 3.8036e-01 insignificant 1 1.0000e+00 insignificant -3.5250e-03 0.8245159 insignificant 1 insignificant 0.6694709 0.6333333 0.03124403 9 0.581891 0.561266 0.02062501 1.1772e-01 9.7256e-01 insignificant 5.8145e-01 1.0000e+00 insignificant 6.7407e-01 7.0836e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00437097 9.1963e-01 insignificant 1.0000e+00 insignificant 0.669471 0.6943942 -0.0281740 9 0.581891 0.611768 -0.02987747 9.7522e-01 2.1475e-02 weaklyHypometh 1.0000e+00 4.5691e-01 insignificant 9.9482e-01 1.1534e-02 weaklyHypometh 1.0000e+00 4.0768e-01 insignificant -0.0417341 5.8205e-02 insignificant 0.7271278 insignificant 0.675908 0.6333333 0.0288842 9 0.593054 0.561266 3.1789e-02 3.5227e-02 9.3777e-01 weaklyHypermeth 1.9571e-01 1.0000e+00 insignificant 3.3681e-01 8.5482e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0078959 8.5462e-01 insignificant 1.0000e+00 insignificant 0.6759078 0.6943942 -0.03541279 9 0.593054 0.611768 -0.01871379 7.5289e-01 1.7193e-02 weaklyHypometh 1.0000e+00 6.8351e-01 insignificant 8.8539e-01 0.01585467 weaklyHypometh 1.0000e+00 0.66061 insignificant -3.8209e-02 7.4634e-02 insignificant 1.000000 insignificant 0.6333333 0.694394 -0.05805899 9 0.561266 0.611768 -0.0505025 9.9750e-01 5.0678e-02 insignificant 1.0000e+00 3.1283e-01 insignificant 9.9601e-01 3.2505e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0461051 3.1902e-01 insignificant 1.0000e+00 insignificant chr16 65756650 65757650 48995 HSF4 ENSG00000102878 0.0592951 1060 24 0.143704 476 26 0.1555748 602 26 0.0250228 1023 26 0.046556 445 25 0.146085 1016 25 0.1009345 632 26 0.093973 462 26 0.0794800 771 26 0.0726260 799 26 0.028326 687 26 0.076761 516 24 0.0585138 570 24 0.0707968 472 25 0.064876 593 24 0.0856888 400 24 0.0176471 107 7 0.0653314 2507 26 0.094693 666 25 0.020415 1063 26 0.115420 197 13 0.0325543 775 19 0.179159 432 26 0.110040 293 24 0.0772243 1449 22 0.0966092 732 26 0.110518 738 19 0.055858 417 20 0.0578037 731 26 0.094972 676 26 0.0642238 690 26 0.053627 815 26 0.3106257 296 26 0.3269241 905 26 0.275253 177 9 0.2820748 288 23 0.420156 198 19 0.4675042 607 26 0.0890098 1001 26 0.0809895 966 25 0.0265542 955 25 0.0981937 1567 24 0.037521 835 25 0.0327162 0.0584205 0.162056 0.0327600 0.0769188 0.0783841 0.0632945 0.0630922 0.0611320 0.0382075 0.055057 0.0827848 0.0499065 0.048145 0.0562683 0.0522354 0.0447893 0.04336918 0.0687011 0.0240896 0.1259084 0.0371242 0.073356 0.054668 0.0492844 0.0394766 0.036582 0.042139 0.0709257 0.0402029 0.0465664 0.076281 0.28656847 0.2659786 0.42674135 0.25391133 0.5278819 0.4881446 0.0459213 0.0401360 0.047558 0.0471303 0.0485032 17 0.0515478 0.0512724 0.00216467 26 0.122523 0.097714 0.02480907 0.801145 9.8603e-01 insignificant 1 1.0000e+00 insignificant 0.6029300 9.8330e-01 insignificant 1 1.0000e+00 insignificant -1.2019e-02 0.4140602 insignificant 1 insignificant 0.0514236 0.3526550 -0.30107220 26 0.105429 0.275477 -0.17004807 1.0000e+00 3.4834e-82 hypomethylated 1.0000e+00 3.4834e-79 hypomethylated 1.0000e+00 2.0408e-26 hypomethylated 1.0000e+00 2.0408e-23 hypomethylated -0.27177468 2.1930e-04 hypomethylated 7.3100e-03 hypomethylated 0.050361 0.0373779 0.0111492 25 0.081530 0.138991 -0.05746181 4.5270e-01 9.5747e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.0397e-01 5.5063e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0088613 6.1652e-01 insignificant 1.0000000 insignificant 0.051298 0.3530604 -0.2910392 26 0.095271 0.293590 -1.9832e-01 1.0000e+00 2.7099e-46 hypomethylated 1.0000e+00 2.7099e-43 hypomethylated 1.0000e+00 4.9249e-19 hypomethylated 1.0000e+00 4.9249e-16 hypomethylated -0.2597554 2.1219e-04 hypomethylated 7.5783e-03 hypomethylated 0.0508346 0.0372041 0.00839021 25 0.088139 0.114924 -0.02678514 3.7945e-01 7.2196e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.3044e-01 0.34678080 insignificant 1.0000e+00 1.00000 insignificant 2.0881e-02 2.8406e-01 insignificant 1.000000 insignificant 0.3548651 0.037204 0.31792769 25 0.341453 0.114924 0.2265291 6.9800e-26 1.0000e+00 hypermethylated 3.4900e-23 1.0000e+00 hypermethylated 4.8675e-15 1.0000e+00 hypermethylated 2.4337e-12 1.0000e+00 hypermethylated 0.2806360 1.0332e-04 hypermethylated 6.0777e-03 hypermethylated chr16 65880950 65881950 49004 PLEKHG4 ENSG00000196155 0.791446 146 9 0.724176 123 9 0.587963 76 9 0.790026 141 9 0.7719444 99 9 0.812710 154 9 0.679221 78 8 0.721206 137 9 0.7961869 114 9 0.866442 56 5 0.777957 194 9 0.729630 43 4 0.7311139 126 9 0.8953984 70 5 0.7503890 94 9 0.7857143 18 1 0.539683 20 1 0.665663 176 8 0.828601 77 9 0.8478753 119 5 0.728571 27 3 0.874373 58 2 0.687690 114 5 0.503041 62 3 0.734613 105 4 0.8101274 112 7 0.7607143 60 5 0.529042 61 5 0.820782 111 5 0.7005224 127 7 0.660913 125 9 0.780533 116 9 0.6797939 156 9 0.8796791 70 4 0.5983496 93 7 0.600000 9 0 0.777178 116 9 0.6981405 108 9 0.746667 122 8 0.8489601 131 9 0.6520149 126 9 0.6775078 88 3 0.727496 144 8 0.8138528 0.737658 0.6429063 0.800174 0.7799587 0.811185 0.731995 0.8163410 0.8174409 0.8648468 0.7958115 0.767218 0.8330264 0.840304 0.7581429 0.5367627 0.762051 0.745120 0.7837931 0.8723441 0.710102 0.839845 0.788640 0.7578344 0.7528055 0.8266472 0.885675 0.730732 0.864325 0.7883560 0.7505903 0.8587528 0.7017519 0.87724842 0.48398796 0.58044806 0.798779 0.6163035 0.8258264 0.793393 0.6964032 0.7725492 0.7471341 1 0.772441 0.7851163 -0.00626036 9 0.7605365 0.7287730 0.03176350 0.6177678 6.9310e-01 insignificant 1.00000 1.0000e+00 insignificant 0.3202973 3.7755e-01 insignificant 1.00000 1.0000e+00 insignificant 0.03875712 0.3158845 insignificant 1.00000 insignificant 0.772330 0.6938406 7.3519e-02 9 0.7387671 0.7507130 -0.01194592 1.3432e-02 9.0902e-01 weaklyHypermeth 5.5733e-02 1.0000e+00 weaklyHypermeth 2.3085e-01 8.8858e-01 insignificant 8.6785e-01 1.0000e+00 insignificant 0.04914376 3.4368e-01 insignificant 1.0000e+00 insignificant 0.772330 0.7774141 0.00696074 8 0.7387671 0.7434233 -0.0046562 3.6534e-01 3.0895e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.0376e-01 3.5742e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02413820 5.5935e-01 insignificant 1.0000e+00 insignificant 0.7849162 0.6938406 0.0791525 9 0.7041160 0.7507130 -0.0465970 8.3734e-03 5.3905e-01 weaklyHypermeth 3.5481e-02 1.0000e+00 weaklyHypermeth 1.4329e-01 5.9021e-01 insignificant 5.6415e-01 1.0000e+00 insignificant 0.01038664 8.5303e-01 insignificant 1.0000e+00 insignificant 0.7849162 0.7774141 0.01976123 8 0.7041160 0.7434233 -0.03930727 5.6368e-01 5.3804e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.2623e-01 7.6843e-01 insignificant 1.0000e+00 1.0000000 insignificant -1.4619e-02 7.6075e-01 insignificant 1.00000000 insignificant 0.6938406 0.7774141 -0.0634323 8 0.7507130 0.7434233 0.0072897 9.3901e-01 9.2999e-02 insignificant 1.0000e+00 3.5632e-01 insignificant 9.2833e-01 4.3278e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0250056 6.6537e-01 insignificant 1.0000e+00 insignificant chr16 66331050 66332050 49017 GFOD2 ENSG00000141098 0.735154 231 7 0.693794 205 7 0.637897 64 6 0.749264 232 7 0.7126824 145 6 0.675084 130 6 0.708672 128 6 0.669099 96 7 0.6948449 80 6 0.673521 43 3 0.745966 370 7 0.715000 76 4 0.7060185 100 5 0.7531067 99 6 0.7168697 85 7 0.7076023 68 4 0.586345 168 1 0.672922 197 7 0.719481 67 7 0.7243547 116 6 0.636905 44 3 0.785714 28 3 0.636857 130 7 0.781746 42 3 0.770971 159 7 0.7500000 115 7 0.7678571 79 7 0.668155 44 5 0.778231 93 7 0.6864265 152 7 0.783764 150 7 0.764871 183 7 0.5763570 184 7 0.7602638 154 7 0.7548359 217 7 0.857143 19 2 0.625625 124 7 0.8213828 139 5 0.772853 198 7 0.7635187 260 7 0.7379635 368 7 0.7714286 63 5 0.799302 194 7 0.7441311 0.688733 0.6280190 0.753105 0.7059771 0.721264 0.696913 0.6746897 0.7038120 0.6957071 0.7479571 0.728448 0.6709770 0.706350 0.6946508 0.6894283 0.757624 0.728834 0.7812360 0.7963602 0.714696 0.785920 0.631296 0.7818487 0.7777405 0.7198276 0.766164 0.621100 0.776601 0.7447710 0.7939573 0.7716814 0.5502384 0.76427239 0.75249731 0.86206897 0.615461 0.7970601 0.7767304 0.767136 0.7399727 0.7972791 0.8065054 0 0.737857 0.8039377 -0.01896549 7 0.6753697 0.6592958 0.01607383 0.8952391 7.9570e-02 insignificant 1.00000 7.8782e-01 insignificant 0.6851934 2.0146e-01 insignificant 1.00000 1.0000e+00 insignificant -0.03440754 0.0921426 insignificant 1.00000 insignificant 0.738662 0.7574671 1.0644e-02 7 0.7062195 0.7448201 -0.03860066 2.7210e-01 4.8728e-01 insignificant 8.6655e-01 1.0000e+00 insignificant 6.8689e-01 2.1140e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03271721 5.0459e-01 insignificant 1.0000e+00 insignificant 0.739260 0.8217913 -0.04758710 7 0.7191959 0.7655086 -0.0463127 9.3395e-01 2.1864e-02 weaklyHypometh 1.0000e+00 3.6662e-01 insignificant 7.6750e-01 4.5476e-02 weaklyHypometh 1.0000e+00 6.6877e-01 insignificant -0.06912935 2.4182e-04 weaklyHypometh 1.6121e-02 weaklyHypometh 0.8045977 0.7574671 0.0352143 7 0.7417078 0.7448201 -0.0031123 1.0070e-01 6.8336e-01 insignificant 3.5457e-01 1.0000e+00 insignificant 7.5673e-01 6.2958e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00169033 9.7300e-01 insignificant 1.0000e+00 insignificant 0.8047776 0.8217913 -0.01654051 7 0.7405232 0.7655086 -0.02498533 4.9945e-01 1.9088e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.9064e-01 4.8956e-01 insignificant 1.0000e+00 1.0000000 insignificant -3.4722e-02 9.8661e-02 insignificant 0.80537172 insignificant 0.7571770 0.8217913 -0.0570227 7 0.7083659 0.7655086 -0.0571427 6.3680e-01 8.5298e-02 insignificant 1.0000e+00 3.2933e-01 insignificant 5.7218e-01 6.3902e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0364121 4.6127e-01 insignificant 1.0000e+00 insignificant chr16 66585650 66586650 49029 DPEP2 ENSG00000167261 0.872384 120 5 0.825860 194 5 0.757568 187 5 0.923214 90 5 0.9035696 82 5 0.885406 220 5 0.769373 68 5 0.884895 189 5 0.9150502 100 5 0.930796 243 5 0.892610 224 5 0.954945 42 3 0.9129321 235 5 0.8266994 134 5 0.9411157 180 5 0.9250000 32 3 0.750000 13 0 0.899351 169 5 0.897745 206 5 0.8097719 206 5 0.980000 41 5 0.895076 95 5 0.907326 116 5 0.907172 108 5 0.876974 75 5 0.8958303 314 5 0.8512037 233 5 0.767143 66 5 0.886024 265 5 0.9333291 247 5 0.854617 278 5 0.903971 221 5 0.9125000 100 5 0.8026726 168 5 0.8580882 80 5 0.746970 58 5 0.896104 75 5 0.8378010 319 5 0.864657 133 5 0.9424908 115 5 0.9050777 137 5 0.8774138 116 5 0.941427 118 5 0.8823036 0.850881 0.7830328 0.920961 0.8876420 0.890561 0.810583 0.8976903 0.8988958 0.9295658 0.8992551 0.942744 0.9280621 0.842505 0.9479958 0.9032738 0.832027 0.914977 0.9031373 0.8202471 0.984921 0.930691 0.922757 0.9258092 0.9009416 0.9105718 0.869156 0.828590 0.876353 0.9385054 0.8860775 0.9078465 0.9102183 0.81369206 0.82666608 0.79356061 0.904229 0.8419754 0.8749968 0.948791 0.9248340 0.8908110 0.9532615 5 0.883436 0.8921807 -0.01595453 5 0.8774852 0.8908526 -0.01336742 0.8978195 3.9855e-02 weaklyHypometh 1.00000 5.7250e-01 insignificant 0.8222914 2.5313e-02 weaklyHypometh 1.00000 5.8868e-01 insignificant -0.01430784 0.4871590 lowCoverage 1.00000 lowCoverage 0.883436 0.8362500 3.9469e-02 5 0.8774852 0.8385346 0.03895053 3.4628e-03 3.0291e-01 weaklyHypermeth 1.5390e-02 1.0000e+00 weaklyHypermeth 2.3438e-02 1.6423e-01 weaklyHypermeth 1.1661e-01 1.0000e+00 insignificant 0.03155844 3.0084e-01 lowCoverage 1.0000e+00 lowCoverage 0.883436 0.9063005 -0.02729783 5 0.8774852 0.9045520 -0.0270668 9.5937e-01 3.6597e-02 weaklyHypometh 1.0000e+00 4.9085e-01 insignificant 9.5559e-01 9.1052e-02 insignificant 1.0000e+00 9.5051e-01 insignificant -0.03229903 1.5588e-01 lowCoverage 9.3902e-01 lowCoverage 0.8921807 0.8362500 0.0490972 5 0.8908526 0.8385346 0.0523180 5.0949e-03 5.7183e-01 weaklyHypermeth 2.2847e-02 1.0000e+00 weaklyHypermeth 4.6310e-02 6.7092e-01 weaklyHypermeth 2.1243e-01 1.0000e+00 insignificant 0.04586627 1.5017e-01 insignificant 5.9593e-01 insignificant 0.8921807 0.9063005 -0.01345365 5 0.8908526 0.9045520 -0.01369938 8.5676e-01 2.8630e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.2927e-01 5.7553e-01 insignificant 1.0000e+00 1.0000000 insignificant -1.7991e-02 4.2640e-01 insignificant 1.00000000 insignificant 0.8362500 0.9063005 -0.0660736 5 0.8385346 0.9045520 -0.0660173 9.2610e-01 4.9013e-02 weaklyHypometh 1.0000e+00 2.0422e-01 insignificant 8.8598e-01 5.4350e-02 insignificant 1.0000e+00 2.7683e-01 insignificant -0.0638575 6.2737e-02 insignificant 3.1368e-01 insignificant chr16 67298550 67299550 49041 CDH3 ENSG00000062038 0.685786 689 13 0.574703 414 13 0.504513 394 13 0.729297 682 13 0.6122593 206 11 0.684691 525 12 0.687195 269 13 0.560321 379 13 0.5683196 354 13 0.639177 281 12 0.720899 484 13 0.698254 204 9 0.5491129 363 13 0.7777984 193 9 0.6442506 425 13 0.6529221 143 9 0.432617 112 6 0.439656 616 13 0.535538 519 13 0.6730661 533 13 0.687579 168 11 0.498420 173 10 0.591708 289 13 0.556485 223 11 0.688508 156 10 0.6301700 548 13 0.4443079 387 13 0.490626 256 11 0.717881 446 13 0.5076772 503 13 0.514226 573 13 0.774894 667 13 0.3999971 367 13 0.5669633 330 13 0.6754507 510 13 0.297436 79 6 0.528125 270 11 0.3886782 588 13 0.688113 474 13 0.6336328 704 13 0.7012081 707 13 0.6904504 356 13 0.612563 592 13 0.6608104 0.450990 0.5238950 0.699390 0.5333501 0.686874 0.656480 0.5141769 0.5406211 0.6165365 0.6610861 0.618592 0.4777573 0.600398 0.5419305 0.7078712 0.519874 0.369895 0.4722274 0.6178882 0.620927 0.489988 0.677812 0.5004361 0.5757416 0.5182609 0.421995 0.365911 0.616742 0.4534542 0.4052171 0.6995507 0.2982360 0.55544663 0.63256909 0.29149580 0.551981 0.1954719 0.6675988 0.627817 0.6265828 0.6400053 0.5897947 9 0.622993 0.5681040 0.04135222 13 0.5542373 0.5677201 -0.01348282 0.0934955 9.8360e-01 insignificant 1.00000 1.0000e+00 insignificant 0.3624734 9.4694e-01 insignificant 1.00000 1.0000e+00 insignificant 0.02664527 0.4836290 insignificant 1.00000 insignificant 0.623554 0.5020999 1.2890e-01 13 0.6334141 0.5443775 0.08903660 1.0056e-09 5.5716e-01 weaklyHypermeth 7.8560e-09 1.0000e+00 weaklyHypermeth 4.4792e-06 9.8100e-01 weaklyHypermeth 4.7150e-05 1.0000e+00 weaklyHypermeth 0.14241045 5.3523e-02 insignificant 2.8170e-01 insignificant 0.623119 0.6871686 -0.05084466 13 0.5857950 0.7202908 -0.1344958 9.8974e-01 4.8006e-04 weaklyHypometh 1.0000e+00 3.0004e-02 weaklyHypometh 8.9396e-01 1.9611e-04 weaklyHypometh 1.0000e+00 1.9611e-02 weaklyHypometh -0.04667466 1.1013e-01 insignificant 7.8108e-01 insignificant 0.5690444 0.5020999 0.0792507 13 0.6250135 0.5443775 0.0806360 5.7364e-05 3.3030e-01 weaklyHypermeth 3.3159e-04 1.0000e+00 weaklyHypermeth 6.1038e-04 9.3405e-01 weaklyHypermeth 4.6358e-03 1.0000e+00 weaklyHypermeth 0.11576518 1.0958e-01 insignificant 4.7439e-01 insignificant 0.5684619 0.6866832 -0.09430485 13 0.5833459 0.6722714 -0.08892548 9.9991e-01 1.4886e-04 weaklyHypometh 1.0000e+00 1.6540e-02 weaklyHypometh 9.3360e-01 1.5759e-03 weaklyHypometh 1.0000e+00 0.1592996 insignificant -7.3320e-02 5.6132e-02 insignificant 0.65270264 insignificant 0.5016332 0.6865724 -0.1761666 13 0.4729489 0.6488622 -0.1759133 9.9999e-01 2.6216e-08 weaklyHypometh 1.0000e+00 3.2770e-07 weaklyHypometh 1.0000e+00 6.0853e-05 weaklyHypometh 1.0000e+00 9.5472e-04 weaklyHypometh -0.1890851 1.9056e-02 weaklyHypometh 1.2620e-01 insignificant chr16 67584250 67585250 49056 ENSG00000203389 0.690139 129 5 0.665413 292 5 0.891449 196 4 0.924675 75 3 0.7345552 198 8 0.879541 98 5 0.672842 270 7 0.704270 160 5 0.8936193 161 5 0.833045 102 4 0.677585 245 5 0.904391 143 5 0.7636798 191 6 0.4551515 32 3 0.7291268 186 5 0.5584083 122 4 0.730952 129 4 0.678223 122 7 0.887069 161 5 0.7685981 102 5 0.639727 62 4 0.875000 6 0 0.738864 150 5 0.765726 81 5 0.653968 46 3 0.8780984 235 5 0.7634131 87 4 0.722222 44 4 0.703692 193 5 0.8566968 311 5 0.902077 246 5 0.679940 139 5 0.6312766 254 8 0.7863054 165 5 0.6088013 151 5 0.700000 15 0 0.657639 85 8 0.9412879 278 5 0.537542 110 5 0.7478741 100 5 0.8764454 94 4 0.9312500 74 4 0.766667 46 2 0.8672540 0.852887 0.8788863 0.934492 0.8963923 0.918717 0.876195 0.9102093 0.8734029 0.8947246 0.8515782 0.909718 0.9183296 0.887270 0.9090544 0.7207830 0.840972 0.857729 0.9354330 0.9417952 0.953161 0.899030 0.882996 0.9046037 0.8978758 0.9171154 0.983414 0.950980 0.937244 0.9334111 0.9290146 0.9253756 0.8159451 0.85994096 0.94545780 0.84375000 0.890523 0.9716188 0.8999629 0.910058 0.9506374 0.9595588 0.9655331 1 0.865552 0.9075000 -0.03108578 5 0.7335287 0.7292545 0.00427428 0.8640831 1.4335e-02 weaklyHypometh 1.00000 3.1458e-01 insignificant 0.5775243 2.4350e-02 weaklyHypometh 1.00000 5.7977e-01 insignificant -0.01281547 0.7412349 lowCoverage 1.00000 lowCoverage 0.864483 0.8776371 -5.6636e-03 5 0.6742478 0.6916023 -0.01735451 1.1975e-01 3.9723e-02 weaklyHypometh 4.1293e-01 6.9689e-01 insignificant 9.7179e-02 1.7380e-01 insignificant 4.0491e-01 1.0000e+00 insignificant 0.03125162 6.0431e-01 insignificant 1.0000e+00 insignificant 0.865552 0.8419811 -0.05055411 5 0.7335287 0.8145320 -0.0810033 9.9838e-01 7.7006e-04 weaklyHypometh 1.0000e+00 3.7200e-02 weaklyHypometh 9.7501e-01 1.0460e-02 weaklyHypometh 1.0000e+00 2.9886e-01 insignificant -0.01981900 7.9664e-01 lowCoverage 1.0000e+00 lowCoverage 0.9075000 0.8775079 0.0218027 5 0.7292545 0.6530526 0.0762019 1.0617e-01 4.3935e-01 insignificant 3.7050e-01 1.0000e+00 insignificant 2.0448e-01 7.5755e-01 insignificant 7.6300e-01 1.0000e+00 insignificant 0.04406708 4.6584e-01 lowCoverage 1.0000e+00 lowCoverage 0.9075000 0.8419811 -0.01681681 5 0.7292545 0.8145320 -0.08527755 9.8094e-01 5.0887e-02 insignificant 1.0000e+00 8.9276e-01 insignificant 9.5833e-01 9.2887e-02 insignificant 1.0000e+00 1.0000000 insignificant -7.0035e-03 9.2692e-01 lowCoverage 1.00000000 lowCoverage 0.8775079 0.8419811 -0.0589180 5 0.6530526 0.8145320 -0.1614795 9.8743e-01 4.5533e-02 weaklyHypometh 1.0000e+00 1.9051e-01 insignificant 9.9771e-01 7.6684e-02 insignificant 1.0000e+00 3.7046e-01 insignificant -0.0510706 5.6403e-01 lowCoverage 1.0000e+00 lowCoverage chr16 67763550 67764550 49061 CIRH1A ENSG00000141076 0.877218 54 3 0.905006 96 5 0.752778 33 3 0.890286 80 5 0.8666667 31 3 0.771111 107 5 0.736111 26 2 0.849589 80 5 0.8060606 26 3 0.765714 25 3 0.847023 183 5 0.809524 14 2 0.8844156 68 5 0.9500000 20 4 0.8285714 42 3 0.8333333 6 0 0.750000 11 1 0.778425 91 5 0.871456 87 5 0.8069787 108 4 0.650000 23 2 0.866667 36 5 0.833451 79 5 0.706667 41 3 0.883636 31 3 0.8641127 125 5 0.7628571 51 5 0.920635 33 3 0.842222 53 3 0.8226370 127 5 0.855652 72 5 0.794695 108 5 0.9120000 78 4 0.8405556 30 3 0.8100000 107 5 0.666667 11 1 0.835606 46 4 0.8965185 82 5 0.805556 46 2 0.8629766 71 5 0.8158730 49 3 0.7295238 45 3 0.857121 69 5 0.7831232 0.818822 0.6194444 0.845002 0.8581197 0.710598 0.730753 0.7938420 0.7588862 0.6747253 0.7618116 0.760405 0.8390609 0.886138 0.7747253 0.8285205 0.751613 0.721051 0.7992632 0.7873879 0.519231 0.810256 0.736438 0.7907692 0.8629371 0.7835877 0.608132 0.909890 0.794957 0.7059020 0.7032776 0.7474964 0.8190769 0.73004274 0.65307692 0.58351515 0.732459 0.8195499 0.7957265 0.819479 0.6592186 0.8567766 0.8085082 2 0.830808 0.8279846 0.00966543 5 0.8410545 0.8363402 0.00471428 0.3336182 5.5513e-01 insignificant 1.00000 1.0000e+00 insignificant 0.2003714 4.5814e-01 insignificant 1.00000 1.0000e+00 insignificant 0.01207741 0.6464191 lowCoverage 1.00000 lowCoverage 0.830808 0.8333333 1.6184e-03 5 0.8410545 0.8605888 -0.01953423 2.6006e-01 1.7949e-01 insignificant 8.3352e-01 1.0000e+00 insignificant 2.7348e-01 1.9704e-01 insignificant 9.9447e-01 1.0000e+00 insignificant 0.00212228 9.5724e-01 lowCoverage 1.0000e+00 lowCoverage 0.830808 0.8250000 -0.01922056 4 0.8410545 0.8576825 -0.0166280 8.5930e-01 3.9281e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.1920e-01 4.3452e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.01480339 6.0550e-01 lowCoverage 1.0000e+00 lowCoverage 0.8279846 0.8333333 -0.0122360 5 0.8363402 0.8605888 -0.0242485 7.1026e-01 7.1091e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 7.7559e-01 1.4776e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00995513 8.1850e-01 lowCoverage 1.0000e+00 lowCoverage 0.8279846 0.8250000 -0.03159931 4 0.8363402 0.8576825 -0.02134228 7.4761e-01 3.7028e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.3822e-01 4.4828e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 2.7260e-03 9.3514e-01 lowCoverage 1.00000000 lowCoverage 0.8333333 0.8250000 -0.0202785 4 0.8605888 0.8576825 0.0029062 2.6566e-01 5.3746e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 3.3302e-01 2.3733e-01 lowCoverage 1.0000e+00 9.0751e-01 lowCoverage 0.0126811 7.7532e-01 lowCoverage 1.0000e+00 lowCoverage chr16 68121350 68122350 49083 CYB5B ENSG00000103018 0.727032 366 8 0.435529 225 8 0.523504 125 8 0.764811 272 8 0.4924242 89 4 0.786732 374 8 0.435768 143 2 0.700820 209 8 0.5322887 126 8 0.810348 78 8 0.584894 332 11 0.590909 36 4 0.7382823 123 8 0.6956542 71 4 0.7629419 102 8 0.3888889 18 0 0.583333 11 0 0.665620 443 8 0.448555 248 8 0.7998477 219 8 0.471591 74 9 0.620329 92 8 0.764625 133 8 0.578998 83 7 0.652137 294 6 0.5498852 287 8 0.6681065 184 8 0.550000 43 4 0.683117 192 8 0.5600168 232 8 0.690803 229 8 0.700016 288 8 0.4919343 176 8 0.5768200 164 8 0.4837145 249 6 0.364690 220 2 0.316379 143 8 0.3860999 272 8 0.839286 204 8 0.6302383 206 8 0.8003318 367 8 0.8905181 255 8 0.644292 244 8 0.6889977 0.481808 0.5181976 0.775210 0.6717033 0.805999 0.450360 0.5979512 0.5152860 0.7270257 0.7373625 0.478521 0.6511847 0.617568 0.7041292 0.4837364 0.594926 0.555195 0.4796116 0.7395717 0.694630 0.862010 0.721195 0.6682956 0.5885038 0.6844364 0.603214 0.538736 0.667975 0.6767427 0.7583067 0.6239907 0.5762493 0.41523804 0.30878603 0.32467532 0.360991 0.3206731 0.8610675 0.886846 0.8349667 0.8723073 0.7864942 2 0.640997 0.6701422 -0.02660918 8 0.5742119 0.6544681 -0.08025622 0.9994011 9.1128e-02 insignificant 1.00000 8.3181e-01 insignificant 0.9961079 2.2469e-01 insignificant 1.00000 1.0000e+00 insignificant -0.00072626 0.9853579 insignificant 1.00000 insignificant 0.640997 0.3744890 2.5049e-01 8 0.5742119 0.3692344 0.20497747 8.2162e-08 8.8888e-01 hypermethylated 5.5892e-07 1.0000e+00 hypermethylated 5.6829e-05 8.5938e-01 hypermethylated 4.8990e-04 1.0000e+00 hypermethylated 0.18680288 3.0373e-03 weaklyHypermeth 2.8123e-02 weaklyHypermeth 0.640898 0.8460330 -0.21536354 8 0.5355039 0.6426899 -0.1071860 9.9916e-01 1.5402e-05 hypomethylated 1.0000e+00 2.2003e-03 hypomethylated 9.9997e-01 2.8160e-06 hypomethylated 1.0000e+00 9.3865e-04 hypomethylated -0.13752403 5.8281e-02 insignificant 5.8162e-01 insignificant 0.6702933 0.3741830 0.2570349 8 0.6618167 0.3408318 0.3209849 3.9128e-14 9.3403e-01 hypermethylated 4.7717e-13 1.0000e+00 hypermethylated 1.7267e-07 9.7738e-01 hypermethylated 2.8778e-06 1.0000e+00 hypermethylated 0.18752914 3.0304e-03 weaklyHypermeth 2.9138e-02 weaklyHypermeth 0.6668235 0.8456113 -0.16499398 8 0.5609727 0.6478278 -0.08685509 9.0007e-01 3.3654e-04 weaklyHypometh 1.0000e+00 2.8045e-02 weaklyHypometh 9.9910e-01 4.1755e-04 weaklyHypometh 1.0000e+00 0.0713044 weaklyHypometh -1.3680e-01 5.7404e-02 insignificant 0.65981446 insignificant 0.3747954 0.8460330 -0.4765353 8 0.4028012 0.6426899 -0.2398887 1.0000e+00 1.9049e-13 hypomethylated 1.0000e+00 4.4301e-12 hypomethylated 1.0000e+00 1.3558e-06 hypomethylated 1.0000e+00 3.5188e-05 hypomethylated -0.3243269 1.2282e-03 weaklyHypometh 1.7925e-02 weaklyHypometh chr16 68677250 68678250 49095 ENSG00000196696 0.782881 451 13 0.749867 198 13 0.631131 213 13 0.786438 259 13 0.7134921 89 10 0.777641 412 14 0.764047 118 9 0.608255 179 11 0.6783739 157 12 0.769042 120 12 0.764767 402 14 0.821780 86 9 0.6829199 166 13 0.7380952 31 3 0.8068427 164 13 0.7735700 78 8 0.674797 121 8 0.778953 253 13 0.762741 233 13 0.7844393 383 14 0.652292 73 5 0.803769 112 12 0.706143 160 13 0.788095 81 6 0.791811 91 9 0.7049167 264 14 0.6583791 76 8 0.590618 64 6 0.758111 181 11 0.7956167 254 13 0.764785 206 14 0.766098 556 14 0.6987567 176 12 0.7299090 146 13 0.5985869 271 13 0.848135 108 8 0.611421 95 7 0.6749996 255 13 0.775748 323 14 0.7663226 404 13 0.8335624 308 14 0.7836085 311 13 0.790798 298 13 0.8396931 0.763820 0.7303012 0.812919 0.7725513 0.807055 0.749159 0.7559268 0.7595723 0.8228339 0.7739343 0.831126 0.7589216 0.801393 0.8526152 0.8030465 0.701025 0.811000 0.8051080 0.7848287 0.785243 0.820145 0.786678 0.8106078 0.7924188 0.7644689 0.661777 0.685374 0.815977 0.8196484 0.8091328 0.7860303 0.7213045 0.74023146 0.71636356 0.85651990 0.625445 0.7045898 0.8203429 0.822581 0.8552835 0.8385141 0.8026399 5 0.765864 0.7832861 -0.00468786 13 0.7885764 0.7093977 0.07917869 0.8374874 4.4427e-01 insignificant 1.00000 1.0000e+00 insignificant 0.8436746 4.2487e-01 insignificant 1.00000 1.0000e+00 insignificant 0.01078408 0.6548025 insignificant 1.00000 insignificant 0.765652 0.7078972 6.7525e-02 13 0.7714977 0.6989983 0.07249941 4.1403e-06 9.9999e-01 weaklyHypermeth 2.4792e-05 1.0000e+00 weaklyHypermeth 8.6264e-03 9.9955e-01 weaklyHypermeth 4.8463e-02 1.0000e+00 weaklyHypermeth 0.04886880 2.5869e-01 insignificant 9.3054e-01 insignificant 0.765595 0.7840633 -0.03428312 13 0.7551761 0.7907014 -0.0355253 9.9863e-01 2.2244e-02 weaklyHypometh 1.0000e+00 3.6662e-01 insignificant 9.9881e-01 7.7893e-03 weaklyHypometh 1.0000e+00 2.5760e-01 insignificant -0.04750418 1.5710e-02 weaklyHypometh 2.6183e-01 insignificant 0.7838221 0.7078972 0.0731331 13 0.7150952 0.6989983 0.0160969 9.7875e-05 9.9999e-01 weaklyHypermeth 5.5818e-04 1.0000e+00 weaklyHypermeth 1.1090e-02 9.9962e-01 weaklyHypermeth 5.9307e-02 1.0000e+00 weaklyHypermeth 0.03808473 3.9218e-01 insignificant 1.0000e+00 insignificant 0.7841931 0.7840633 -0.02808766 13 0.7661734 0.7907014 -0.02452801 9.7583e-01 8.1335e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6010e-01 1.0472e-01 insignificant 1.0000e+00 1.0000000 insignificant -5.8288e-02 2.2922e-02 weaklyHypometh 0.43263350 insignificant 0.7076190 0.7840633 -0.1005330 13 0.6774982 0.7907014 -0.1132032 1.0000e+00 9.1984e-07 weaklyHypometh 1.0000e+00 9.7855e-06 weaklyHypometh 9.9995e-01 7.3583e-05 weaklyHypometh 1.0000e+00 1.1320e-03 weaklyHypometh -0.0963730 4.8277e-02 weaklyHypometh 2.5645e-01 insignificant chr16 68924150 68925150 49097 DDX19B ENSG00000157349 0.978311 519 7 0.941251 491 6 0.956007 366 6 0.930793 608 7 0.9814815 196 6 0.778338 581 6 0.947221 352 6 0.973120 373 6 0.9871889 564 6 0.972238 588 6 0.972110 306 6 0.970647 377 6 0.9699257 511 6 0.9475304 382 6 0.9496178 612 6 0.9608851 266 6 0.929978 171 6 0.956774 784 6 0.972075 284 6 0.9509664 453 7 0.942130 48 6 0.945161 133 6 0.978201 236 6 0.939021 167 6 0.933775 122 6 0.9510993 681 7 0.9289367 166 6 0.956824 132 6 0.952175 401 6 0.9722493 721 7 0.978486 475 7 0.933690 448 7 0.9149783 355 6 0.8867896 210 6 0.8750000 209 6 0.935110 78 8 0.963701 218 6 0.9271957 512 8 0.844802 501 6 0.8318546 453 7 0.9281735 889 6 0.9827012 499 6 0.876062 426 7 0.9705216 0.943288 0.9577474 0.963794 0.9807888 0.963651 0.945740 0.9746251 0.9876186 0.9733983 0.9734150 0.972121 0.9704393 0.951038 0.9516455 0.9619429 0.922097 0.943330 0.9637199 0.9687404 0.941094 0.949852 0.972368 0.9408913 0.9342068 0.9632044 0.932078 0.954370 0.951671 0.9783581 0.9682934 0.9520486 0.9172001 0.88278751 0.98470088 0.97671756 0.967613 0.9318267 0.9770777 0.967707 0.9729402 0.9797212 0.9896897 6 0.962997 0.9592493 0.00304951 6 0.9217200 0.9583306 -0.03661064 0.4585147 5.7764e-01 insignificant 1.00000 1.0000e+00 insignificant 0.7031151 4.4364e-01 insignificant 1.00000 1.0000e+00 insignificant 0.00034393 0.9753087 insignificant 1.00000 insignificant 0.962887 0.9386852 2.1932e-02 6 0.8295480 0.8411786 -0.01163063 7.5443e-04 3.1075e-01 weaklyHypermeth 3.6623e-03 1.0000e+00 weaklyHypermeth 4.7267e-01 1.3162e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03419381 6.2480e-02 insignificant 3.1716e-01 insignificant 0.962887 0.9750723 -0.01390457 6 0.8295480 0.8352974 -0.0057494 9.5743e-01 2.5908e-02 weaklyHypometh 1.0000e+00 4.0482e-01 insignificant 9.3134e-01 4.9228e-02 weaklyHypometh 1.0000e+00 7.0325e-01 insignificant 0.05860418 1.0451e-01 insignificant 7.6842e-01 insignificant 0.9592493 0.9392789 0.0188363 6 0.9583306 0.9346429 0.0236877 2.2039e-03 7.9778e-01 weaklyHypermeth 1.0347e-02 1.0000e+00 weaklyHypermeth 3.1991e-01 3.1124e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03384988 5.1485e-02 insignificant 2.6268e-01 insignificant 0.9592493 0.9757773 -0.01628554 6 0.9583306 0.9281082 0.03022240 9.5816e-01 2.3511e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.5195e-01 2.2476e-01 insignificant 1.0000e+00 1.0000000 insignificant 5.8260e-02 1.0527e-01 insignificant 0.82240727 insignificant 0.9386852 0.9750723 -0.0351175 6 0.8411786 0.8352974 0.0058812 9.7263e-01 3.1502e-02 weaklyHypometh 1.0000e+00 1.3697e-01 insignificant 8.2032e-01 6.7438e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0244104 4.6146e-01 insignificant 1.0000e+00 insignificant chr16 69006550 69007550 49100 ST3GAL2 ENSG00000157350 0.715441 211 7 0.840786 192 7 0.737155 118 7 0.787733 210 7 0.8690098 91 7 0.813812 344 8 0.827373 126 7 0.866824 82 7 0.7632946 85 7 0.694821 79 3 0.878426 246 7 0.795238 69 3 0.7589648 72 3 0.9818182 23 1 0.8797258 66 3 0.8971429 63 7 0.731350 543 9 0.591459 169 8 0.774754 164 5 0.6670482 245 5 0.972222 59 6 0.804545 21 2 0.777122 193 8 0.818220 70 6 0.959184 20 2 0.6686498 264 15 0.9030612 52 3 0.928571 47 3 0.794539 95 3 0.8035316 245 9 0.812192 194 9 0.737021 254 12 0.8517407 153 7 0.8418354 106 7 0.7577085 174 5 0.739177 93 5 0.908881 128 7 0.8259911 217 10 0.702274 238 7 0.7711940 305 13 0.7771943 268 10 0.7083695 173 10 0.780234 290 13 0.7825000 0.822452 0.6980519 0.851016 0.7759019 0.803171 0.820128 0.7221279 0.6058098 0.7508052 0.7847321 0.747727 0.7869755 0.773493 0.7094628 0.7850909 0.631006 0.795804 0.8075912 0.7616613 1.000000 0.851781 0.806501 0.8505105 0.9064935 0.7775924 0.743831 0.836364 0.783398 0.7869341 0.7854226 0.8520756 0.7128724 0.56106245 0.79822134 0.55389610 0.847242 0.8298639 0.8304060 0.878028 0.8191885 0.8376698 0.8211648 2 0.836409 0.8359788 -0.02629012 5 0.7457677 0.7601479 -0.01438015 0.8114971 8.9918e-02 insignificant 1.00000 8.3181e-01 insignificant 0.9981144 9.6742e-02 insignificant 1.00000 9.7997e-01 insignificant -0.03796274 0.2674229 insignificant 1.00000 insignificant 0.837618 0.8473020 -2.0564e-03 11 0.8025304 0.8225281 -0.01999776 9.0332e-01 9.8104e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9545e-01 1.4223e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02728016 4.2192e-01 insignificant 1.0000e+00 insignificant 0.836307 0.8445840 -0.03873030 7 0.7308129 0.7141866 0.0166263 9.0159e-01 8.0340e-02 insignificant 1.0000e+00 7.7530e-01 insignificant 9.9832e-01 3.4333e-02 weaklyHypometh 1.0000e+00 6.2423e-01 insignificant 0.04575579 1.0742e-01 insignificant 7.7842e-01 insignificant 0.8368700 0.8473020 0.0221205 5 0.7926664 0.8225281 -0.0298618 5.1504e-01 1.6640e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.2214e-01 5.3628e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01068258 7.7642e-01 insignificant 1.0000e+00 insignificant 0.8357616 0.8445840 -0.02118585 5 0.7460389 0.7141866 0.03185230 5.4432e-01 7.7862e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6081e-01 2.5548e-01 insignificant 1.0000e+00 1.0000000 insignificant 8.3719e-02 1.8613e-02 weaklyHypermeth 0.39602172 insignificant 0.8471264 0.8465775 -0.0437215 7 0.8106967 0.8094115 0.0012852 3.8614e-01 2.0371e-02 weaklyHypometh 1.0000e+00 9.3875e-02 weaklyHypometh 7.7117e-01 6.0590e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0730360 4.5080e-02 weaklyHypermeth 2.4368e-01 insignificant chr16 69020350 69021350 49103 ST3GAL2 ENSG00000157350 0.753293 292 10 0.852235 241 7 0.854000 164 6 0.803698 209 10 0.9200606 69 5 0.763586 463 10 0.790910 143 6 0.756211 153 6 0.8116113 111 6 0.699868 91 6 0.803422 320 6 0.745761 79 5 0.8235805 134 6 0.7777778 54 4 0.7021328 148 6 0.7442779 48 5 0.757052 972 8 0.703424 267 11 0.825027 200 6 0.7773299 367 11 0.860684 90 6 0.830864 57 6 0.611303 211 7 0.798387 105 6 0.952381 46 5 0.8747850 226 6 0.8004345 122 6 0.693197 57 4 0.646410 157 6 0.8009889 197 6 0.711399 203 6 0.802865 473 11 0.5238894 205 6 0.5230234 105 6 0.6031496 192 6 0.612393 33 2 0.747188 119 6 0.7688664 196 6 0.775889 345 11 0.7204563 282 11 0.6693910 308 10 0.7252948 216 11 0.777746 253 11 0.7814770 0.727307 0.7924344 0.898851 0.9111157 0.834824 0.783490 0.7519028 0.7932948 0.8386440 0.8307154 0.742663 0.8177847 0.798172 0.7379771 0.7753721 0.789360 0.766899 0.8416901 0.8912864 0.867428 0.794314 0.824585 0.8968624 0.9726562 0.9103759 0.805013 0.841071 0.791831 0.8382196 0.7609378 0.8821168 0.6062720 0.50606992 0.56920872 0.54525240 0.775741 0.6973762 0.8238459 0.823444 0.8205339 0.7812224 0.8933160 5 0.779669 0.8194444 -0.02039392 6 0.7693944 0.7376408 0.03175362 0.5300092 4.5522e-01 insignificant 1.00000 1.0000e+00 insignificant 0.5933759 5.3872e-01 insignificant 1.00000 1.0000e+00 insignificant 0.00128795 0.9676155 insignificant 1.00000 insignificant 0.816046 0.6188235 1.9450e-01 6 0.8266787 0.6513103 0.17536842 1.0373e-12 9.6301e-01 weaklyHypermeth 9.8789e-12 1.0000e+00 weaklyHypermeth 2.2461e-05 8.9303e-01 weaklyHypermeth 2.0991e-04 1.0000e+00 weaklyHypermeth 0.15351123 1.5225e-02 weaklyHypermeth 1.0428e-01 insignificant 0.779229 0.7841880 -0.02759738 10 0.7232733 0.7469834 -0.0237101 8.7849e-01 9.4022e-03 weaklyHypometh 1.0000e+00 2.1369e-01 insignificant 9.3907e-01 1.3356e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.04950758 7.2576e-02 insignificant 6.3110e-01 insignificant 0.8349673 0.6188235 0.2143572 6 0.7762075 0.6513103 0.1248972 1.1649e-08 9.4152e-01 hypermethylated 9.4711e-08 1.0000e+00 hypermethylated 1.7876e-04 9.4289e-01 hypermethylated 1.5770e-03 1.0000e+00 hypermethylated 0.15222328 1.6075e-02 weaklyHypermeth 1.0646e-01 insignificant 0.8196382 0.7841880 0.00217544 6 0.7185023 0.7469834 -0.02848110 7.2209e-01 1.5302e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.1500e-01 2.8405e-01 insignificant 1.0000e+00 1.0000000 insignificant 4.8220e-02 1.8865e-01 insignificant 1.00000000 insignificant 0.6188235 0.8215649 -0.2075643 6 0.6513103 0.7996494 -0.1483391 9.9910e-01 1.3568e-05 hypomethylated 1.0000e+00 1.1696e-04 hypomethylated 9.9923e-01 2.3733e-03 weaklyHypometh 1.0000e+00 2.0460e-02 weaklyHypometh -0.1040036 6.6762e-02 insignificant 3.2727e-01 insignificant chr16 69244950 69245950 49107 IL34 ENSG00000157368 0.713597 143 6 0.709919 201 6 0.491975 184 6 0.790606 156 4 0.5862859 128 6 0.728629 187 5 0.436058 144 4 0.693054 200 6 0.8002052 143 6 0.708712 197 6 0.601360 223 6 0.614127 148 6 0.7994273 228 6 0.6871798 106 4 0.5801222 234 6 0.7180818 136 4 0.650196 100 6 0.646282 206 4 0.897317 208 6 0.6162132 102 5 0.409211 41 3 0.473306 90 4 0.718311 108 6 0.494627 105 6 0.827057 62 4 0.8122595 195 6 0.6340485 84 5 0.616942 71 5 0.584995 150 6 0.7555500 243 6 0.489898 233 6 0.601347 167 6 0.1907547 230 6 0.0491071 122 6 0.0151515 49 4 0.109127 29 3 0.141124 146 6 0.0194872 215 6 0.517692 106 4 0.5535673 122 4 0.5865944 162 4 0.5973710 95 4 0.723826 146 5 0.8027959 0.716244 0.6424132 0.784402 0.8035534 0.809278 0.548002 0.8160914 0.8090458 0.8456607 0.8025499 0.599306 0.8081836 0.734409 0.8132191 0.7074083 0.634677 0.624077 0.8812212 0.7542681 0.647138 0.544943 0.742845 0.7255170 0.8268508 0.8007295 0.769280 0.637071 0.779299 0.7682952 0.6775714 0.8334919 0.0428850 0.16347222 0.01454545 0.13822857 0.042478 0.0185299 0.5330957 0.622896 0.6601417 0.5364722 0.6131723 4 0.775341 0.7514526 0.00415678 6 0.5189731 0.5091248 0.00984833 0.1959059 6.9412e-01 insignificant 1.00000 1.0000e+00 insignificant 0.4788922 8.6585e-01 insignificant 1.00000 1.0000e+00 insignificant 0.05533803 0.2491178 insignificant 1.00000 insignificant 0.775341 0.0442478 7.2585e-01 6 0.5189731 0.2176441 0.30132904 1.1069e-62 9.9976e-01 hypermethylated 7.9066e-61 1.0000e+00 hypermethylated 5.3385e-12 9.9749e-01 hypermethylated 1.4428e-10 1.0000e+00 hypermethylated 0.58600880 1.1745e-09 hypermethylated 4.6982e-08 hypermethylated 0.779636 0.5927100 0.15343567 4 0.6960848 0.5437705 0.1523142 9.9024e-06 9.9711e-01 lowCoverage 1.9043e-04 1.0000e+00 lowCoverage 6.0615e-04 9.9792e-01 lowCoverage 1.3776e-02 1.0000e+00 lowCoverage 0.07765719 1.0350e-01 lowCoverage 7.6664e-01 lowCoverage 0.7514526 0.0442478 0.7036166 6 0.5091248 0.2176441 0.2914807 1.5639e-38 9.9993e-01 hypermethylated 6.7994e-37 1.0000e+00 hypermethylated 7.5031e-10 9.9119e-01 hypermethylated 1.9745e-08 1.0000e+00 hypermethylated 0.53067077 1.0144e-08 hypermethylated 5.6355e-07 hypermethylated 0.7614980 0.5927100 0.15278521 4 0.6905294 0.5437705 0.14675892 6.7673e-05 9.6050e-01 lowCoverage 1.1279e-03 1.0000e+00 lowCoverage 1.3423e-02 9.0536e-01 lowCoverage 1.6370e-01 1.0000000 lowCoverage 2.2319e-02 6.7978e-01 lowCoverage 1.00000000 lowCoverage 0.0410783 0.5927100 -0.5422815 4 0.0324883 0.5437705 -0.5112822 1.0000e+00 2.1960e-21 lowCoverage 1.0000e+00 1.1459e-19 lowCoverage 1.0000e+00 1.4486e-08 lowCoverage 1.0000e+00 8.5210e-07 lowCoverage -0.5083516 2.7519e-06 lowCoverage 2.7519e-04 lowCoverage chr16 69282650 69283650 49108 ENSG00000177242 0.937071 329 14 0.816963 486 14 0.926572 442 14 0.927530 357 12 0.8761043 283 14 0.901345 685 13 0.868820 347 12 0.957117 469 14 0.8962806 394 11 0.870978 415 13 0.882324 493 14 0.908030 206 8 0.9440869 507 14 0.9710968 199 8 0.8962617 348 13 0.8320546 141 7 0.629636 90 7 0.899429 344 13 0.938740 397 14 0.8778113 513 13 0.855642 294 14 0.775676 202 11 0.943621 437 14 0.951188 362 14 0.975589 134 9 0.9076898 497 14 0.8601762 341 14 0.652843 164 10 0.853120 410 13 0.9350402 616 14 0.910128 556 14 0.910605 647 14 0.5016317 467 14 0.5394830 314 14 0.6538108 340 10 0.545027 101 8 0.701821 344 14 0.6007049 477 14 0.876703 305 12 0.8941002 337 14 0.9182155 327 9 0.8665164 240 11 0.803624 280 12 0.9334088 0.847042 0.8924110 0.917908 0.8600692 0.914989 0.822251 0.9330811 0.8658751 0.9050137 0.8798638 0.877710 0.9320127 0.935231 0.8657700 0.6212168 0.753682 0.895957 0.8814500 0.8946295 0.860894 0.814323 0.907625 0.9094295 0.9383760 0.8788061 0.847446 0.728504 0.853920 0.9145229 0.8596007 0.8977711 0.5259618 0.60178292 0.75924667 0.65731143 0.671564 0.7149379 0.9033146 0.893620 0.8824240 0.8650728 0.8414819 5 0.899664 0.8964999 0.00406343 14 0.8739460 0.9116477 -0.03770172 0.3839481 6.8811e-01 insignificant 1.00000 1.0000e+00 insignificant 0.5578567 7.2906e-01 insignificant 1.00000 1.0000e+00 insignificant 0.01030267 0.7389197 insignificant 1.00000 insignificant 0.899893 0.6549192 2.6004e-01 14 0.9125612 0.5717839 0.34077725 8.2390e-61 9.9950e-01 hypermethylated 4.8465e-59 1.0000e+00 hypermethylated 3.6626e-12 9.8046e-01 hypermethylated 1.0174e-10 1.0000e+00 hypermethylated 0.29749949 3.0524e-05 hypermethylated 5.6526e-04 hypermethylated 0.899893 0.8885158 0.00689549 14 0.9125612 0.8704013 0.0421598 1.4243e-05 2.8651e-01 weaklyHypermeth 2.6375e-04 1.0000e+00 weaklyHypermeth 1.0784e-01 1.4437e-01 insignificant 8.4250e-01 1.0000e+00 insignificant 0.01608067 5.3522e-01 insignificant 1.0000e+00 insignificant 0.8964777 0.6549192 0.2526201 14 0.9053368 0.5717839 0.3335529 4.7035e-37 9.9984e-01 hypermethylated 1.8814e-35 1.0000e+00 hypermethylated 2.2113e-09 9.6065e-01 hypermethylated 5.2651e-08 1.0000e+00 hypermethylated 0.28719681 1.4136e-05 hypermethylated 3.2873e-04 hypermethylated 0.8964777 0.8885158 0.00437598 14 0.9053368 0.8704013 0.03493550 8.9678e-03 5.4556e-01 weaklyHypermeth 8.3035e-02 1.0000e+00 weaklyHypermeth 2.3002e-01 2.4974e-01 insignificant 1.0000e+00 1.0000000 insignificant 5.7780e-03 8.5992e-01 insignificant 1.00000000 insignificant 0.6549192 0.8885158 -0.2736986 14 0.5717839 0.8704013 -0.2986174 1.0000e+00 4.6593e-16 hypomethylated 1.0000e+00 1.3704e-14 hypomethylated 1.0000e+00 3.2480e-07 hypomethylated 1.0000e+00 1.0827e-05 hypomethylated -0.2814188 5.5207e-05 hypomethylated 1.9037e-03 hypomethylated chr16 69306550 69307550 49112 ENSG00000177242 0.752381 27 4 0.598773 124 6 0.789138 111 6 0.861111 37 5 0.7775120 41 2 0.644444 29 5 0.769841 30 2 0.350000 11 2 0.7708333 20 2 0.775000 17 2 0.739583 40 2 0.744048 19 2 0.4288462 33 2 NA 0 0 0.7329193 37 2 0.9375000 26 2 0.723077 18 2 0.734127 39 5 0.775000 35 2 0.7255952 33 4 0.761905 23 2 1.000000 2 0 0.803968 41 6 0.812500 12 1 NA 0 0 0.8191545 129 6 0.8750000 8 0 0.916667 8 1 0.604167 11 1 0.6450073 125 6 0.820324 64 6 0.759722 35 5 0.0600771 180 6 0.0833333 25 2 0.7421053 51 2 0.000000 1 0 0.791667 10 1 0.0000000 124 6 0.646536 62 5 0.7090909 29 3 0.8086131 54 5 0.8720261 53 5 0.469048 38 5 0.7142857 0.545455 0.8095238 1.000000 0.8181818 1.000000 0.761905 0.2000000 0.9166667 0.7500000 0.6666667 0.571429 0.3076923 NA 0.6086957 0.8750000 0.846154 0.750000 0.7500000 0.6250000 0.857143 1.000000 0.800000 0.7500000 NA 0.7142857 0.750000 0.833333 0.333333 0.5000000 0.6000000 0.8750000 0.0000000 0.00000000 0.21052632 0.00000000 0.750000 0.0000000 0.7894737 0.545455 0.6250000 0.8823529 0.6000000 0 0.718019 0.7838428 -0.05604122 2 0.7151926 0.7858729 -0.07068022 0.9720425 9.8195e-02 lowCoverage 1.00000 8.3380e-01 lowCoverage 0.9893311 1.7927e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage -0.08431978 0.0785693 lowCoverage 1.00000 lowCoverage 0.718019 0.1406650 5.6288e-01 2 0.7151926 0.1168429 0.59834970 7.3806e-17 1.0000e+00 lowCoverage 8.6830e-16 1.0000e+00 lowCoverage 3.2871e-04 9.9999e-01 lowCoverage 2.4349e-03 1.0000e+00 lowCoverage 0.43782382 3.6066e-02 lowCoverage 2.0727e-01 lowCoverage 0.718019 0.7415254 -0.03136723 1 0.7151926 0.6879721 0.0272206 1.1576e-01 2.2699e-01 lowCoverage 7.7692e-01 1.0000e+00 lowCoverage 1.8723e-01 1.8290e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.01629142 8.3875e-01 lowCoverage 1.0000e+00 lowCoverage 0.7838428 0.1406650 0.6505746 5 0.7858729 0.1168429 0.6690299 2.9642e-15 1.0000e+00 hypermethylated 3.8496e-14 1.0000e+00 hypermethylated 3.7258e-04 9.9999e-01 hypermethylated 2.9806e-03 1.0000e+00 hypermethylated 0.52214360 1.8857e-02 lowCoverage 1.2245e-01 lowCoverage 0.7838428 0.7415254 0.04052551 4 0.7858729 0.6879721 0.09790081 3.0401e-02 8.1689e-01 lowCoverage 2.3567e-01 1.0000e+00 lowCoverage 6.4375e-02 8.9595e-01 lowCoverage 5.2767e-01 1.0000000 lowCoverage 1.0061e-01 2.4285e-01 lowCoverage 1.00000000 lowCoverage 0.1406650 0.7415254 -0.6864368 4 0.1168429 0.6879721 -0.5711291 9.9992e-01 1.2091e-09 lowCoverage 1.0000e+00 1.8046e-08 lowCoverage 9.9619e-01 1.2591e-02 lowCoverage 1.0000e+00 8.1759e-02 lowCoverage -0.4215324 4.2661e-02 lowCoverage 2.3312e-01 lowCoverage chr16 70156450 70157450 49120 CHST4 ENSG00000140835 0.498731 880 24 0.510434 688 22 0.495262 709 24 0.526371 619 24 0.6052134 456 20 0.452434 912 25 0.493574 590 22 0.552519 595 19 0.5277796 572 22 0.574174 554 23 0.529727 796 24 0.374730 469 22 0.5353154 529 21 0.6298437 290 16 0.5143626 686 24 0.3690966 342 22 0.555499 639 11 0.477981 672 24 0.434283 458 23 0.5384974 707 22 0.561410 159 10 0.312495 247 16 0.468126 621 24 0.473061 370 20 0.458232 164 17 0.5848886 716 23 0.4242915 307 21 0.477325 204 18 0.500619 448 18 0.6338229 795 21 0.634517 727 21 0.448302 962 23 0.1906678 589 19 0.4949539 366 15 0.3310017 429 21 0.181250 89 5 0.224602 561 21 0.2334822 759 17 0.471899 884 23 0.4968159 864 24 0.4162011 737 24 0.5472551 562 23 0.435534 747 23 0.4111782 0.431833 0.3764029 0.435965 0.5167781 0.369238 0.388443 0.4452828 0.4117217 0.4553991 0.4560892 0.266918 0.5033658 0.437918 0.4352408 0.2949720 0.459726 0.380021 0.3627490 0.4457325 0.517709 0.297973 0.391554 0.4530724 0.4507933 0.5061603 0.329399 0.405167 0.432326 0.5027629 0.5382763 0.3226107 0.1290735 0.41225013 0.30953695 0.21632695 0.208362 0.1613698 0.3989300 0.406810 0.3574093 0.4463540 0.3976207 12 0.435748 0.3803112 0.00213849 21 0.4901533 0.5114133 -0.02126004 0.6212138 5.0829e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9842920 1.5361e-01 insignificant 1.00000 1.0000e+00 insignificant 0.01170040 0.7063111 insignificant 1.00000 insignificant 0.435900 0.1987111 2.0749e-01 21 0.5245778 0.3038162 0.22076154 1.2550e-46 9.9738e-01 hypermethylated 4.4821e-45 1.0000e+00 hypermethylated 9.0045e-13 9.9892e-01 hypermethylated 3.0015e-11 1.0000e+00 hypermethylated 0.23379842 3.8718e-03 weaklyHypermeth 3.2265e-02 weaklyHypermeth 0.435819 0.4114391 0.02353584 23 0.5076587 0.4679510 0.0397078 5.6728e-03 9.3959e-01 weaklyHypermeth 6.3740e-02 1.0000e+00 weaklyHypermeth 6.9435e-02 7.4127e-01 insignificant 5.9346e-01 1.0000e+00 insignificant 0.03625033 2.2470e-01 insignificant 1.0000e+00 insignificant 0.3802275 0.1987111 0.1880768 21 0.5132394 0.3038162 0.2094232 8.1866e-21 1.0000e+00 weaklyHypermeth 1.4115e-19 1.0000e+00 weaklyHypermeth 7.5183e-12 1.0000e+00 weaklyHypermeth 2.8916e-10 1.0000e+00 weaklyHypermeth 0.22209802 3.9152e-03 weaklyHypermeth 3.4957e-02 weaklyHypermeth 0.3802029 0.4114391 0.01882305 21 0.4939638 0.4679510 0.02601280 1.6957e-01 9.3711e-01 insignificant 9.3353e-01 1.0000e+00 insignificant 8.8525e-02 9.7425e-01 insignificant 6.8624e-01 1.0000000 insignificant 2.4550e-02 4.9969e-01 insignificant 1.00000000 insignificant 0.1987111 0.4115781 -0.1703916 21 0.3038162 0.4807717 -0.1769555 9.9927e-01 8.1995e-18 weaklyHypometh 1.0000e+00 2.8274e-16 weaklyHypometh 9.9724e-01 3.0513e-08 weaklyHypometh 1.0000e+00 1.6059e-06 weaklyHypometh -0.1975481 8.0468e-03 weaklyHypometh 6.4374e-02 weaklyHypometh chr16 71440050 71441050 49132 ENSG00000221286 0.777237 202 5 0.472507 479 6 0.566489 151 6 0.800146 123 6 0.7120516 102 6 0.732857 442 6 0.736315 159 6 0.778513 223 6 0.6676357 129 6 0.692235 77 4 0.828235 397 6 0.561905 30 1 0.7345551 101 6 0.8924908 72 5 0.6961950 124 6 0.8080808 34 3 0.375000 7 0 0.575033 151 5 0.764306 292 5 0.7610775 305 6 0.809375 104 6 0.565000 39 3 0.768047 174 6 0.794866 166 6 0.555556 26 3 0.7939974 420 6 0.7665355 145 6 0.664813 84 5 0.785185 297 6 0.8286160 396 6 0.698090 420 6 0.889661 296 6 0.1386332 326 6 0.0000000 133 5 0.0238095 175 6 0.000000 5 0 0.204253 357 8 0.0472637 358 6 0.563947 187 5 0.4331743 160 6 0.6395029 172 5 0.6741363 116 5 0.244873 166 5 0.8286710 0.571995 0.5779984 0.783097 0.7835302 0.837554 0.809092 0.7336389 0.7026219 0.7724181 0.7998512 0.518367 0.6511604 0.817437 0.7066594 0.8330736 NA 0.516076 0.7154357 0.8347140 0.763575 0.390744 0.803643 0.6454719 0.6120454 0.7950289 0.669472 0.778071 0.726372 0.8499882 0.6109836 0.8636567 0.0092004 0.00000000 0.00044050 0.01004491 0.024572 0.0217027 0.5511762 0.304259 0.6579936 0.6552907 0.2956908 3 0.748333 0.7801170 -0.02531043 6 0.6892243 0.7434703 -0.05424598 0.9628614 6.0979e-02 insignificant 1.00000 6.9294e-01 insignificant 0.8296888 1.8356e-01 insignificant 1.00000 1.0000e+00 insignificant -0.04666858 0.2671673 insignificant 1.00000 insignificant 0.748333 0.0280857 7.2279e-01 6 0.6892243 0.0686483 0.62057600 5.9088e-58 1.0000e+00 hypermethylated 2.9544e-56 1.0000e+00 hypermethylated 7.8446e-14 1.0000e+00 hypermethylated 3.7355e-12 1.0000e+00 hypermethylated 0.62765004 3.8470e-09 hypermethylated 1.4796e-07 hypermethylated 0.748333 0.4719101 0.26247981 5 0.6892243 0.5059793 0.1832451 4.8380e-12 9.9967e-01 hypermethylated 2.6878e-10 1.0000e+00 hypermethylated 8.3059e-07 9.9948e-01 hypermethylated 4.3715e-05 1.0000e+00 hypermethylated 0.18551651 7.5511e-02 insignificant 6.4539e-01 insignificant 0.7802883 0.0288035 0.7462142 6 0.7719736 0.1721318 0.5998418 1.2433e-51 1.0000e+00 hypermethylated 8.8808e-50 1.0000e+00 hypermethylated 2.0326e-11 1.0000e+00 hypermethylated 7.2592e-10 1.0000e+00 hypermethylated 0.67431862 3.4283e-09 hypermethylated 2.6141e-07 hypermethylated 0.7801170 0.4719101 0.28717193 5 0.7434703 0.5059793 0.23749106 3.4458e-11 9.9997e-01 hypermethylated 2.4613e-09 1.0000e+00 hypermethylated 3.6368e-06 9.9995e-01 hypermethylated 2.2730e-04 1.0000000 hypermethylated 2.3219e-01 3.7759e-02 weaklyHypermeth 0.47795694 insignificant 0.0280857 0.4719101 -0.4327395 5 0.0686483 0.5059793 -0.4373309 1.0000e+00 5.4449e-15 hypomethylated 1.0000e+00 1.5125e-13 hypomethylated 1.0000e+00 2.5623e-07 hypomethylated 1.0000e+00 9.4901e-06 hypomethylated -0.4421335 2.6711e-03 weaklyHypometh 3.0865e-02 weaklyHypometh chr16 71518750 71519750 49136 ENSG00000221286 0.900793 186 5 0.788581 159 5 0.754849 116 5 0.932924 241 5 0.8329945 91 5 0.890971 248 5 0.890238 133 5 0.910468 127 5 0.7991944 116 5 0.889738 134 5 0.958741 90 5 0.952000 97 5 0.9348684 184 5 0.9230769 49 5 0.8543192 185 5 0.9277778 37 5 0.792857 44 3 0.647397 384 5 0.950667 91 5 0.8912349 225 5 0.981818 46 5 0.866415 115 5 0.759589 163 5 0.916667 40 5 0.912283 90 5 0.9254447 219 5 0.9041667 51 5 0.894318 59 5 0.880976 144 5 0.9564279 160 5 0.947447 214 5 0.928634 233 5 0.1264606 227 5 0.2585247 135 5 0.0000000 3 0 0.065000 64 5 0.451515 50 5 0.0226934 295 5 0.801609 238 5 0.8540007 185 5 0.9174180 358 5 0.8541193 196 5 0.548653 318 5 0.8947034 0.763260 0.7398815 0.922788 0.7975023 0.883466 0.887180 0.9085626 0.7758050 0.8771149 0.9479086 0.947778 0.9379839 0.898860 0.8289514 0.9056070 0.774581 0.629999 0.9466204 0.8821992 0.981902 0.863094 0.744405 0.8904321 0.9035570 0.9228233 0.909915 0.878314 0.868831 0.9501381 0.9467280 0.9241810 0.1070555 0.21551815 0.10204433 0.05833333 0.399228 0.0211419 0.7880175 0.834274 0.9057057 0.8308518 0.5356359 5 0.844740 0.9009126 -0.05581771 5 0.8562449 0.9033414 -0.04709645 0.9936244 7.3631e-03 weaklyHypometh 1.00000 2.1656e-01 insignificant 0.9772798 6.2708e-02 insignificant 1.00000 9.1315e-01 insignificant -0.03499780 0.1582672 lowCoverage 1.00000 lowCoverage 0.844740 0.1046512 7.3722e-01 5 0.8562449 0.1192975 0.73694746 3.9232e-52 1.0000e+00 hypermethylated 1.7833e-50 1.0000e+00 hypermethylated 3.9430e-13 1.0000e+00 hypermethylated 1.5165e-11 1.0000e+00 hypermethylated 0.71715214 8.9401e-05 lowCoverage 1.3955e-03 lowCoverage 0.844740 0.7714286 0.07326285 5 0.8562449 0.7792492 0.0769957 7.3728e-03 9.9963e-01 weaklyHypermeth 8.1019e-02 1.0000e+00 weaklyHypermeth 3.9764e-02 9.9872e-01 weaklyHypermeth 3.9371e-01 1.0000e+00 insignificant 0.07602449 3.1008e-01 lowCoverage 1.0000e+00 lowCoverage 0.9009126 0.1046512 0.7957876 5 0.9033414 0.1192975 0.7840439 7.7490e-45 1.0000e+00 hypermethylated 4.3050e-43 1.0000e+00 hypermethylated 1.0561e-11 1.0000e+00 hypermethylated 3.9116e-10 1.0000e+00 hypermethylated 0.75214994 7.6787e-05 lowCoverage 1.2181e-03 lowCoverage 0.9009126 0.7714286 0.12979393 5 0.9033414 0.7792492 0.12409217 3.6713e-05 1.0000e+00 weaklyHypermeth 6.6752e-04 1.0000e+00 weaklyHypermeth 7.5268e-04 9.9986e-01 weaklyHypermeth 1.7504e-02 1.0000000 weaklyHypermeth 1.1102e-01 1.6117e-01 insignificant 1.00000000 insignificant 0.1046512 0.7714286 -0.6647216 5 0.1192975 0.7792492 -0.6599517 1.0000e+00 2.8995e-17 hypomethylated 1.0000e+00 9.6650e-16 hypomethylated 1.0000e+00 7.8226e-08 hypomethylated 1.0000e+00 3.2594e-06 hypomethylated -0.6411276 8.6760e-05 lowCoverage 2.6291e-03 lowCoverage chr16 71628250 71629250 49147 ENSG00000221799 0.078197 143 4 0.095991 116 4 0.135888 117 4 0.057801 182 5 0.0265805 94 4 0.261457 300 5 0.060601 98 4 0.095159 87 4 0.0698279 155 4 0.105556 117 3 0.132981 164 4 0.022727 65 3 0.0304348 154 3 0.0892157 96 3 0.0275264 132 3 0.0312500 38 1 0.013333 53 3 0.244581 200 4 0.049495 68 4 0.0357719 218 4 0.000000 35 4 0.027778 110 3 0.224314 92 4 0.020737 74 4 0.077178 77 4 0.0897415 195 5 0.0688462 75 4 0.046445 71 3 0.080808 63 3 0.0270525 176 5 0.057516 170 5 0.188713 233 4 0.8533066 122 4 0.7638889 24 3 1.0000000 39 2 0.760000 32 3 0.627477 98 4 0.6228609 124 5 0.110256 233 5 0.1150784 179 5 0.0928345 299 4 0.0060606 97 3 0.128115 213 5 0.1148466 0.128119 0.1599043 0.092902 0.0531130 0.127889 0.077547 0.1224506 0.0940821 0.1397531 0.1706344 0.029293 0.0403140 0.116656 0.0354785 0.0402778 0.013348 0.076910 0.0865600 0.0296109 0.000000 0.032099 0.041917 0.0350230 0.0963489 0.0815168 0.096735 0.059540 0.106425 0.0445415 0.0568627 0.0942853 0.8968271 0.69845679 0.78579132 0.67777778 0.754586 0.6502071 0.0905199 0.031953 0.0312257 0.0082492 0.0423789 3 0.082498 0.0583942 0.02292140 4 0.0916459 0.0802360 0.01140992 0.0049701 8.8709e-01 lowCoverage 0.98579 1.0000e+00 lowCoverage 0.0711150 7.0397e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.00745794 0.7654944 lowCoverage 1.00000 lowCoverage 0.082466 0.7949886 -7.1820e-01 4 0.0763716 0.6601339 -0.58376234 1.0000e+00 7.4888e-47 lowCoverage 1.0000e+00 3.7444e-44 lowCoverage 1.0000e+00 2.3428e-09 lowCoverage 1.0000e+00 4.6857e-07 lowCoverage -0.68803683 3.8207e-05 lowCoverage 6.7031e-04 lowCoverage 0.082498 0.0763957 0.02586523 4 0.0916459 0.1007430 -0.0090972 1.0763e-02 2.8739e-08 lowCoverage 1.0872e-01 2.8739e-05 lowCoverage 1.7263e-02 3.8700e-03 lowCoverage 2.0551e-01 1.8428e-01 lowCoverage -0.00725033 7.9227e-01 lowCoverage 1.0000e+00 lowCoverage 0.0583942 0.7986270 -0.7399636 4 0.0802360 0.7921607 -0.7119247 1.0000e+00 6.9941e-34 lowCoverage 1.0000e+00 3.4971e-31 lowCoverage 1.0000e+00 2.5933e-09 lowCoverage 1.0000e+00 6.4832e-07 lowCoverage -0.69549477 2.4343e-05 lowCoverage 4.7732e-04 lowCoverage 0.0583942 0.0763957 -0.00078094 4 0.0802360 0.1007430 -0.02050708 1.2263e-01 8.3125e-11 lowCoverage 7.3871e-01 4.1562e-08 lowCoverage 1.3253e-01 7.6658e-03 lowCoverage 9.4802e-01 0.4509280 lowCoverage -1.4708e-02 6.2519e-01 lowCoverage 1.00000000 lowCoverage 0.7986270 0.0763957 0.7264581 5 0.7921607 0.1007430 0.6914177 1.3422e-17 1.0000e+00 hypermethylated 4.4740e-15 1.0000e+00 hypermethylated 2.9462e-06 1.0000e+00 hypermethylated 4.2088e-04 1.0000e+00 hypermethylated 0.6807865 2.3669e-05 lowCoverage 1.1271e-03 lowCoverage chr16 73424650 73425650 49178 FA2H ENSG00000103089 0.812609 336 8 0.674495 102 7 0.722585 118 8 0.842330 148 8 0.7187500 22 0 0.804133 453 8 0.823816 93 8 0.776887 97 7 0.7521295 99 8 0.804120 117 8 0.786634 150 8 0.714176 98 8 0.7736021 152 8 NA 0 0 0.7834626 133 8 0.7592330 79 8 0.704785 90 8 0.792140 152 8 0.805410 141 8 0.8348087 534 8 0.810904 126 8 0.768906 232 8 0.781036 165 8 0.786573 234 8 0.790970 169 8 0.7986948 169 8 0.6911231 231 8 0.775536 95 8 0.741004 79 7 0.7406003 157 8 0.722163 165 8 0.816588 468 8 0.7015152 68 7 0.7565430 122 8 0.6347495 164 8 0.760402 196 8 0.707536 146 8 0.5802010 131 8 0.801783 277 8 0.8459243 319 8 0.9066500 205 8 0.8109850 241 8 0.804863 190 8 0.8296098 0.696260 0.7259960 0.863956 0.7212460 0.803086 0.833149 0.7972257 0.7556805 0.8288679 0.8083675 0.729909 0.8138950 NA 0.8001632 0.7807992 0.715266 0.796582 0.8081438 0.8303464 0.829799 0.758375 0.799168 0.7948171 0.7915425 0.8025383 0.694688 0.753931 0.763336 0.7527758 0.7623295 0.8204358 0.6939362 0.76040258 0.61603544 0.75307669 0.702778 0.6107522 0.8270876 0.859141 0.9230154 0.8253204 0.8182667 7 0.802505 0.7947598 0.01259383 8 0.7948327 0.7848697 0.00996300 0.1152217 6.8441e-01 insignificant 1.00000 1.0000e+00 insignificant 0.3904718 5.9236e-01 insignificant 1.00000 1.0000e+00 insignificant 0.00427819 0.7832769 insignificant 1.00000 insignificant 0.802505 0.7134220 8.7506e-02 8 0.7948327 0.7107086 0.08412412 1.0906e-06 9.9983e-01 weaklyHypermeth 6.9464e-06 1.0000e+00 weaklyHypermeth 1.2401e-04 9.9650e-01 weaklyHypermeth 1.0001e-03 1.0000e+00 weaklyHypermeth 0.08279527 3.3547e-02 weaklyHypermeth 1.9734e-01 insignificant 0.802505 0.8417208 -0.04752665 8 0.7948327 0.8363003 -0.0414676 9.8829e-01 5.5666e-03 weaklyHypometh 1.0000e+00 1.5264e-01 insignificant 9.9864e-01 4.8045e-03 weaklyHypometh 1.0000e+00 1.8479e-01 insignificant -0.06108826 3.1986e-02 weaklyHypometh 4.1540e-01 insignificant 0.7947598 0.7134220 0.0752746 8 0.7848697 0.7107086 0.0741611 9.8240e-05 9.9995e-01 weaklyHypermeth 5.5818e-04 1.0000e+00 weaklyHypermeth 2.1560e-03 9.9991e-01 weaklyHypermeth 1.4092e-02 1.0000e+00 weaklyHypermeth 0.07851707 4.0866e-02 weaklyHypermeth 2.2250e-01 insignificant 0.7947598 0.8417208 -0.06109445 8 0.7848697 0.8363003 -0.05143058 9.6276e-01 3.2428e-05 weaklyHypometh 1.0000e+00 4.6326e-03 weaklyHypometh 9.6493e-01 2.4686e-04 weaklyHypometh 1.0000e+00 0.0617146 weaklyHypometh -6.5366e-02 2.4902e-02 weaklyHypometh 0.44452885 insignificant 0.7134220 0.8417208 -0.1353993 8 0.7107086 0.8363003 -0.1255917 9.9989e-01 5.2558e-07 weaklyHypometh 1.0000e+00 5.8398e-06 weaklyHypometh 9.9823e-01 1.4763e-06 weaklyHypometh 1.0000e+00 3.6908e-05 weaklyHypometh -0.1438835 2.9803e-03 weaklyHypometh 3.3262e-02 weaklyHypometh chr16 73593750 73594750 49182 ZNRF1 ENSG00000186187 0.832115 821 8 0.644061 708 9 0.772948 312 10 0.829804 612 10 0.6981512 282 10 0.848686 706 7 0.833666 387 10 0.781695 372 9 0.7081122 340 8 0.803681 256 9 0.765723 573 10 0.791487 214 5 0.8079428 217 10 0.8435380 215 7 0.8402185 317 9 0.7769960 165 7 0.904444 325 4 0.746897 676 8 0.813334 404 8 0.8930114 506 7 0.733898 116 8 0.804697 75 3 0.819948 333 10 0.688053 169 9 0.866335 89 5 0.8617280 750 10 0.8150094 251 9 0.794166 113 6 0.771085 407 8 0.8303625 681 10 0.762290 729 10 0.890494 565 9 0.7994014 406 10 0.6911137 192 9 0.9138215 763 7 0.809524 63 5 0.751698 373 10 0.8570298 727 10 0.852774 751 10 0.7403384 602 8 0.7903462 1010 10 0.7293255 621 8 0.830037 641 10 0.8815835 0.835501 0.8558462 0.894917 0.8839620 0.874152 0.898826 0.8690196 0.8320017 0.9111361 0.8787845 0.890324 0.9134058 0.877609 0.8862837 0.8162392 0.880259 0.873593 0.8702879 0.9166496 0.797867 0.896139 0.884737 0.8738004 0.8917613 0.9124507 0.852867 0.914160 0.890207 0.9010400 0.8997280 0.8757143 0.9261207 0.73675461 0.92842641 0.92348249 0.895708 0.9163251 0.9130144 0.913583 0.9151675 0.8898843 0.8978083 4 0.862733 0.8660276 -0.01083028 10 0.7428988 0.6727942 0.07010459 0.9347563 2.1269e-02 weaklyHypometh 1.00000 3.8991e-01 insignificant 0.9677287 1.8489e-02 weaklyHypometh 1.00000 5.1131e-01 insignificant -0.00634653 0.7753827 insignificant 1.00000 insignificant 0.863128 0.8985737 -3.7990e-02 10 0.7870622 0.7585184 0.02854384 2.8769e-01 5.7032e-05 weaklyHypometh 9.0754e-01 1.9666e-03 weaklyHypometh 4.9578e-01 5.5929e-04 weaklyHypometh 1.0000e+00 2.0795e-02 weaklyHypometh -0.00693916 8.4788e-01 insignificant 1.0000e+00 insignificant 0.862717 0.8736552 -0.02661662 10 0.7214737 0.7679115 -0.0464378 9.3832e-01 2.8380e-02 weaklyHypometh 1.0000e+00 4.2999e-01 insignificant 9.5826e-01 6.1262e-02 insignificant 1.0000e+00 8.1070e-01 insignificant 0.00826140 7.7690e-01 insignificant 1.0000e+00 insignificant 0.8666355 0.8985737 -0.0260451 10 0.7951204 0.7585184 0.0366020 2.2510e-01 6.6666e-02 insignificant 7.2848e-01 1.0000e+00 insignificant 2.5052e-01 3.3369e-01 insignificant 9.1432e-01 1.0000e+00 insignificant -0.00059264 9.8727e-01 insignificant 1.0000e+00 insignificant 0.8664327 0.8736552 -0.01487827 10 0.7288604 0.7679115 -0.03905110 5.6136e-01 3.0295e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.7212e-01 5.9308e-01 insignificant 1.0000e+00 1.0000000 insignificant 1.4608e-02 6.3256e-01 insignificant 1.00000000 insignificant 0.8985737 0.8738962 0.0091598 10 0.7585184 0.8377216 -0.0792032 4.7572e-02 4.5672e-01 weaklyHypermeth 8.0631e-01 1.0000e+00 insignificant 7.2786e-02 6.3542e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0152006 7.1275e-01 insignificant 1.0000e+00 insignificant chr16 73607750 73608750 49185 ZNRF1 ENSG00000186187 0.834444 104 6 0.621623 261 9 0.720640 130 4 0.614935 52 4 0.4931217 76 5 0.760641 93 9 0.712001 149 9 0.760861 180 9 0.6944444 92 4 0.655515 149 9 0.713985 394 9 0.863471 63 4 0.6342807 195 9 0.7847222 33 1 0.7014220 112 4 0.7069444 29 3 0.826509 49 3 0.643727 64 5 0.703045 187 5 0.7662626 83 8 0.972917 58 3 1.000000 16 2 0.760119 92 5 0.864899 60 4 0.757143 27 2 0.7356402 267 9 0.8876856 61 3 0.904762 22 1 0.650034 198 6 0.7595554 321 9 0.760787 247 9 0.782892 106 8 0.6334005 227 9 0.6442875 208 5 0.5792164 117 9 0.600000 7 0 0.794226 103 9 0.7823543 268 9 0.653869 63 3 0.7145913 134 9 0.7920455 73 8 0.7407407 26 1 0.710440 70 7 0.8777198 0.809974 0.7964234 0.809397 0.7788221 0.802610 0.785361 0.8789360 0.8470395 0.8751224 0.8593120 0.932491 0.8313886 0.916242 0.8117375 0.5567294 0.784051 0.810468 0.8682537 0.8540404 0.961363 0.955516 0.832615 0.9380482 0.8832713 0.8535041 0.909981 0.917180 0.789569 0.8783967 0.9029690 0.8976608 0.8315996 0.73679714 0.84353624 0.88624757 0.798958 0.8952716 0.8318061 0.874629 0.9141547 0.8355263 0.8373843 0 0.832799 0.8915254 -0.03791288 5 0.6626867 0.8223548 -0.15966813 0.9984387 4.2714e-03 weaklyHypometh 1.00000 1.4786e-01 insignificant 0.9999932 7.4456e-04 weaklyHypometh 1.00000 1.3206e-01 insignificant -0.10907322 0.0067065 weaklyHypometh 0.81716 insignificant 0.832799 0.8032258 3.1355e-02 9 0.6626867 0.5803384 0.08234827 3.0428e-01 8.7530e-01 insignificant 9.5384e-01 1.0000e+00 insignificant 8.6043e-01 8.5289e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03838220 3.9482e-01 insignificant 1.0000e+00 insignificant 0.834272 0.7459016 -0.00675388 8 0.7118907 0.6591105 0.0527802 4.6726e-01 2.6560e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.9029e-01 1.3862e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01170754 7.0119e-01 insignificant 1.0000e+00 insignificant 0.8915254 0.8032258 0.0704856 5 0.8223548 0.5803384 0.2420164 6.2786e-02 9.9807e-01 insignificant 2.2999e-01 1.0000e+00 insignificant 6.7363e-02 9.9998e-01 insignificant 2.9552e-01 1.0000e+00 insignificant 0.14745542 1.0990e-02 weaklyHypermeth 7.9514e-02 weaklyHypermeth 0.8913043 0.7459016 0.03296784 4 0.7868258 0.6591105 0.12771529 2.3749e-01 7.9249e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 2.7127e-01 8.2152e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 9.7366e-02 2.1463e-02 weaklyHypermeth 0.42084788 insignificant 0.8056156 0.7459016 -0.0190802 8 0.6630728 0.6591105 0.0039623 9.1060e-01 2.9331e-01 insignificant 1.0000e+00 9.9767e-01 insignificant 9.8361e-01 3.3851e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0500897 2.8911e-01 insignificant 9.6694e-01 insignificant chr16 73835950 73836950 49200 BCAR1 ENSG00000050820 0.526616 92 5 0.243579 239 5 0.402856 188 5 0.397457 111 4 0.2787285 198 5 0.602096 160 5 0.465870 165 5 0.203422 165 5 0.2450211 160 5 0.316347 150 5 0.605193 215 5 0.288682 157 5 0.1686855 154 5 0.3093218 153 4 0.1866667 189 5 0.2618623 110 5 0.101852 37 2 0.507739 100 4 0.281167 186 5 0.2628921 124 5 0.624611 86 5 0.342698 84 4 0.413377 105 5 0.463026 88 5 0.567518 167 5 0.2983989 257 5 0.4129966 181 5 0.267191 113 5 0.554904 157 5 0.3051185 316 5 0.308428 279 5 0.527259 137 5 0.1706349 173 5 0.0333333 120 5 0.0059524 155 3 0.000000 79 3 0.206243 215 8 0.0370370 270 5 0.120689 116 5 0.0068966 92 3 0.3214806 103 4 0.2200000 84 4 0.220705 90 5 0.4723976 0.290102 0.3397434 0.292155 0.2544956 0.614496 0.473373 0.2574913 0.2876917 0.3899666 0.5676984 0.304165 0.2028301 0.368862 0.1601316 0.2313577 0.197037 0.375151 0.2572577 0.2374109 0.480596 0.154291 0.426220 0.3932084 0.3978482 0.3512701 0.355174 0.236994 0.510018 0.3246430 0.2518866 0.5841953 0.0036465 0.01251251 0.00915682 0.00551032 0.056362 0.0340340 0.0998470 0.020400 0.1228344 0.0603604 0.1344208 3 0.319358 0.3555104 -0.02735094 5 0.4520246 0.4367732 0.01525133 0.7395646 3.6289e-01 insignificant 1.00000 1.0000e+00 insignificant 0.8930962 2.0400e-01 insignificant 1.00000 1.0000e+00 insignificant -0.09099121 0.0679994 lowCoverage 1.00000 lowCoverage 0.319358 0.0346192 2.9820e-01 5 0.4520246 0.1693205 0.28270407 6.1608e-12 9.9132e-01 hypermethylated 5.5503e-11 1.0000e+00 hypermethylated 1.0182e-08 9.9984e-01 hypermethylated 1.8513e-07 1.0000e+00 hypermethylated 0.25726931 1.2525e-04 lowCoverage 1.8420e-03 lowCoverage 0.319344 0.0948454 0.23022799 5 0.4383173 0.3047359 0.1335814 5.7304e-06 9.9991e-01 hypermethylated 1.1437e-04 1.0000e+00 hypermethylated 2.0598e-06 9.9998e-01 hypermethylated 8.9556e-05 1.0000e+00 hypermethylated 0.15484856 4.0565e-02 lowCoverage 4.5987e-01 lowCoverage 0.3553299 0.0345850 0.3270314 5 0.3930959 0.1523884 0.2407075 9.4077e-12 9.9999e-01 hypermethylated 9.7997e-11 1.0000e+00 hypermethylated 3.1012e-08 1.0000e+00 hypermethylated 6.0807e-07 1.0000e+00 hypermethylated 0.34826052 9.8362e-06 lowCoverage 2.3419e-04 lowCoverage 0.3534836 0.0948454 0.26398025 5 0.3968830 0.3047359 0.09214716 4.9253e-07 9.9634e-01 hypermethylated 1.3681e-05 1.0000e+00 hypermethylated 8.8711e-06 9.9946e-01 hypermethylated 4.4356e-04 1.0000000 hypermethylated 2.4584e-01 5.2076e-03 lowCoverage 0.21412887 lowCoverage 0.0301205 0.0948454 -0.0714327 5 0.1207590 0.3047359 -0.1839769 9.9861e-01 2.2348e-03 weaklyHypometh 1.0000e+00 1.2918e-02 weaklyHypometh 9.9992e-01 1.2341e-02 weaklyHypometh 1.0000e+00 8.0685e-02 weaklyHypometh -0.1024207 1.5467e-01 lowCoverage 6.1622e-01 lowCoverage chr16 80021150 80022150 49283 GAN ENSG00000127688 0.675883 103 5 0.583554 114 5 0.640476 42 5 0.719167 80 5 0.6023810 67 5 0.600135 214 6 0.650926 52 5 0.580243 65 5 0.6081933 59 5 0.638776 33 5 0.687517 153 5 0.583333 10 0 0.6151515 39 5 0.7653846 41 4 0.7346939 50 5 0.5583333 24 2 0.333333 3 0 0.741609 88 5 0.720635 90 5 0.7415850 139 5 0.599206 24 2 0.760000 42 5 0.600504 82 5 0.662338 47 5 0.765873 35 5 0.6280013 129 5 0.5063085 104 5 0.559829 29 2 0.709615 77 5 0.7146894 116 5 0.608718 125 5 0.736216 218 5 0.4974240 80 5 0.6359788 55 5 0.5947059 85 5 0.366667 16 3 0.572727 72 5 0.6372527 132 5 0.588384 81 5 0.7556929 110 5 0.8381750 99 5 0.7650000 57 5 0.544928 84 5 0.7034719 0.499948 0.6992187 0.725423 0.6773112 0.709019 0.627561 0.6458139 0.6824449 0.6354911 0.6839200 0.757812 0.6459517 0.741707 0.7168899 0.6093750 0.575705 0.760261 0.6388889 0.7093748 0.630208 0.778711 0.622262 0.7420860 0.7122396 0.6887065 0.636185 0.670272 0.733023 0.6618961 0.6731530 0.7049648 0.5546916 0.58404948 0.60112592 0.53343088 0.603575 0.6749184 0.7266809 0.666912 0.7905110 0.7963449 0.6600770 2 0.682128 0.6819066 -0.00377721 5 0.6138129 0.6368133 -0.02300041 0.4995626 4.7217e-01 insignificant 1.00000 1.0000e+00 insignificant 0.6045393 3.6580e-01 insignificant 1.00000 1.0000e+00 insignificant -0.01520943 0.6421531 lowCoverage 1.00000 lowCoverage 0.683094 0.6022727 6.9018e-02 5 0.6443576 0.5862367 0.05812090 2.1430e-02 9.9208e-01 weaklyHypermeth 8.5041e-02 1.0000e+00 weaklyHypermeth 4.7701e-02 9.9055e-01 weaklyHypermeth 2.2290e-01 1.0000e+00 insignificant 0.08827288 1.0155e-01 lowCoverage 4.6161e-01 lowCoverage 0.682128 0.7331787 -0.04824062 5 0.6138129 0.7139373 -0.1001244 9.9371e-01 4.9788e-02 weaklyHypometh 1.0000e+00 5.8574e-01 insignificant 9.7522e-01 1.3692e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.05937041 3.6652e-01 lowCoverage 1.0000e+00 lowCoverage 0.6832845 0.6022727 0.0744436 5 0.6706438 0.5862367 0.0844071 2.2712e-02 9.7924e-01 weaklyHypermeth 9.0126e-02 1.0000e+00 weaklyHypermeth 4.7414e-02 9.8828e-01 weaklyHypermeth 2.1650e-01 1.0000e+00 insignificant 0.10348230 6.5103e-02 lowCoverage 3.1913e-01 lowCoverage 0.6819066 0.7331787 -0.04433785 5 0.6368133 0.7139373 -0.07712397 9.9175e-01 9.1034e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7423e-01 4.0419e-01 insignificant 1.0000e+00 1.0000000 insignificant -4.4161e-02 4.9877e-01 lowCoverage 1.00000000 lowCoverage 0.6022727 0.7336449 -0.1189884 5 0.5862367 0.7206902 -0.1344535 9.9951e-01 2.1922e-02 weaklyHypometh 1.0000e+00 1.0010e-01 insignificant 9.9986e-01 2.2305e-02 weaklyHypometh 1.0000e+00 1.3178e-01 insignificant -0.1476433 6.9663e-02 lowCoverage 3.3654e-01 lowCoverage chr16 80022250 80023250 49284 GAN ENSG00000127688 0.847346 412 10 0.824785 271 11 0.776340 282 11 0.848531 234 10 0.8877663 81 7 0.913379 394 8 0.828119 196 8 0.812181 219 8 0.8353385 184 8 0.838418 178 8 0.856014 286 8 0.822468 122 8 0.7981682 211 8 0.7979798 38 2 0.7942082 206 8 0.8100834 61 4 0.842341 92 6 0.842752 280 10 0.825054 223 8 0.8442606 407 9 0.889904 111 7 0.563753 111 7 0.824904 264 11 0.761767 101 7 0.791667 53 6 0.8493986 313 11 0.8166586 151 8 0.776786 106 7 0.729779 183 8 0.8637738 349 11 0.875936 355 11 0.824772 482 10 0.5903171 290 11 0.7328739 152 8 0.7939272 179 7 0.614070 87 7 0.798502 123 7 0.5415761 341 11 0.595615 366 10 0.7053934 356 10 0.7502882 319 10 0.7433524 294 10 0.777447 261 10 0.7996378 0.810871 0.7502675 0.826976 0.8772567 0.872001 0.843743 0.8118382 0.8352906 0.8265801 0.8565716 0.829925 0.7864780 0.803661 0.8224548 0.8023169 0.787132 0.836406 0.8082147 0.8139474 0.884479 0.553854 0.809871 0.7927525 0.8033432 0.8531195 0.820561 0.755549 0.748527 0.8675392 0.8703976 0.8512690 0.6255559 0.75571180 0.70962335 0.56805965 0.799066 0.4699696 0.4724308 0.654953 0.6827070 0.7174579 0.7555774 5 0.834324 0.8321055 0.00639686 8 0.8360923 0.8291371 0.00695521 0.2555537 7.1892e-01 insignificant 1.00000 1.0000e+00 insignificant 0.0629099 9.4722e-01 insignificant 1.00000 1.0000e+00 insignificant 0.03485185 0.2082543 insignificant 1.00000 insignificant 0.834361 0.6424915 1.9637e-01 8 0.8497513 0.5939173 0.25583395 2.2965e-13 1.0000e+00 weaklyHypermeth 2.2081e-12 1.0000e+00 weaklyHypermeth 1.7314e-02 9.9994e-01 weaklyHypermeth 9.1124e-02 1.0000e+00 weaklyHypermeth 0.15373243 1.8706e-02 weaklyHypermeth 1.2147e-01 insignificant 0.834324 0.6697995 0.17793157 8 0.8360923 0.7088815 0.1272107 2.8308e-16 9.5165e-01 weaklyHypermeth 2.1776e-14 1.0000e+00 weaklyHypermeth 7.6054e-08 9.7563e-01 weaklyHypermeth 5.8349e-06 1.0000e+00 weaklyHypermeth 0.11785768 1.9102e-02 weaklyHypermeth 2.9387e-01 insignificant 0.8321055 0.6430401 0.1889024 10 0.8291371 0.6479098 0.1812273 3.9018e-09 1.0000e+00 weaklyHypermeth 3.2515e-08 1.0000e+00 weaklyHypermeth 9.1992e-02 9.9245e-01 insignificant 3.8490e-01 1.0000e+00 insignificant 0.11888058 4.9988e-02 weaklyHypermeth 2.5767e-01 insignificant 0.8321055 0.6697995 0.16841224 10 0.8291371 0.7088815 0.12025554 1.1222e-07 9.3000e-01 weaklyHypermeth 3.6199e-06 1.0000e+00 weaklyHypermeth 3.5370e-04 8.9025e-01 weaklyHypermeth 1.0403e-02 1.0000000 weaklyHypermeth 8.3006e-02 7.0753e-02 insignificant 0.72196594 insignificant 0.6430401 0.6697995 -0.0243160 10 0.6479098 0.7088815 -0.0609717 9.8450e-01 1.7784e-02 weaklyHypometh 1.0000e+00 8.2821e-02 weaklyHypometh 6.9705e-01 5.8057e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0358747 5.3364e-01 insignificant 1.0000e+00 insignificant chr16 80084350 80085350 49295 ENSG00000213288 0.982511 167 7 0.734181 172 7 0.769974 80 7 0.966287 260 7 0.9206349 49 5 0.972871 207 7 0.893434 67 6 0.980000 83 8 0.9882353 38 3 0.968750 25 1 0.901178 210 10 0.833333 10 0 0.8854167 36 2 0.8187500 26 2 0.6569697 44 3 1.0000000 11 1 NA 0 0 0.846060 270 5 0.849368 135 7 0.9484127 144 5 0.750000 37 1 0.927083 50 5 0.864898 61 7 1.000000 46 4 0.802089 253 7 0.8960838 194 7 0.6838624 51 3 0.720833 36 4 0.925533 212 7 0.7095086 175 7 0.881066 221 7 0.950489 234 7 0.6290200 174 7 0.7929794 178 7 0.6878968 175 8 0.794080 181 7 0.579051 121 7 0.5996131 346 7 0.906579 107 7 0.7622304 165 7 0.8167663 309 7 0.9003279 148 5 0.918939 151 7 0.9284271 0.742235 0.7932729 0.922907 0.9470899 0.923763 0.775794 1.0000000 0.9411765 0.8779762 0.9343023 0.880137 0.7817460 0.826565 0.8800866 0.9555528 NA 0.702110 0.8242630 0.9110765 0.392857 0.860083 0.797551 1.0000000 0.7825957 0.9288144 0.773810 0.857143 0.763221 0.7801938 0.8539047 0.9396586 0.6556821 0.65847839 0.75000000 0.43134921 0.724660 0.5953103 0.7651942 0.801687 0.8291396 0.7882535 0.8355083 1 0.879132 0.8718770 0.01518441 7 0.7244315 0.8821267 -0.15769525 0.7410947 7.5992e-01 insignificant 1.00000 1.0000e+00 insignificant 0.4019573 8.2460e-01 insignificant 1.00000 1.0000e+00 insignificant 0.04771449 0.2189013 lowCoverage 1.00000 lowCoverage 0.879012 0.7157447 1.6012e-01 7 0.7047480 0.5499823 0.15476568 1.6485e-07 1.0000e+00 weaklyHypermeth 1.0917e-06 1.0000e+00 weaklyHypermeth 1.7105e-05 1.0000e+00 weaklyHypermeth 1.6478e-04 1.0000e+00 weaklyHypermeth 0.20989495 1.2919e-03 lowCoverage 1.3049e-02 lowCoverage 0.880198 0.8454545 0.02632752 7 0.8866472 0.8606315 0.0260157 2.2310e-02 8.5410e-01 weaklyHypermeth 1.9231e-01 1.0000e+00 insignificant 6.4819e-03 9.9466e-01 weaklyHypermeth 9.3941e-02 1.0000e+00 weaklyHypermeth 0.02936655 4.5670e-01 lowCoverage 1.0000e+00 lowCoverage 0.8714653 0.7157447 0.1393085 7 0.8737072 0.5499823 0.3237249 6.3986e-10 1.0000e+00 weaklyHypermeth 5.5640e-09 1.0000e+00 weaklyHypermeth 1.0412e-05 1.0000e+00 weaklyHypermeth 1.1832e-04 1.0000e+00 weaklyHypermeth 0.16218045 7.1145e-03 weaklyHypermeth 5.5820e-02 weaklyHypermeth 0.8734508 0.8454545 0.01441118 7 0.9003329 0.8606315 0.03970140 1.1226e-01 9.4530e-01 insignificant 6.8870e-01 1.0000e+00 insignificant 1.3758e-01 9.8924e-01 insignificant 9.6889e-01 1.0000000 insignificant -1.8348e-02 6.7888e-01 insignificant 1.00000000 insignificant 0.7191781 0.8454545 -0.1549697 7 0.7199753 0.8606315 -0.1406563 9.9790e-01 2.0103e-06 weaklyHypometh 1.0000e+00 1.9904e-05 weaklyHypometh 9.9716e-01 6.8987e-03 weaklyHypometh 1.0000e+00 4.8927e-02 weaklyHypometh -0.1805284 5.3997e-03 weaklyHypometh 4.8646e-02 weaklyHypometh chr16 80084450 80085450 49296 ENSG00000213288 0.993266 132 6 0.718056 114 6 0.764991 53 6 0.969275 194 6 0.9074074 32 4 0.977389 148 6 0.905000 49 5 0.977778 54 7 1.0000000 21 2 0.977273 17 0 0.890198 152 9 0.750000 8 0 0.8690476 18 1 0.8285714 14 1 0.6262626 29 2 1.0000000 11 1 NA 0 0 0.833285 239 4 0.841270 86 6 0.9521605 90 4 0.785714 17 0 0.916667 40 4 0.869048 36 6 1.000000 25 3 0.790298 228 6 0.8896288 144 6 0.6562500 30 2 0.695455 28 3 0.936527 143 6 0.6750356 114 6 0.877911 151 6 0.954377 163 6 0.6022928 128 6 0.7783105 138 6 0.6532187 153 7 0.832312 161 6 0.554912 93 6 0.5650022 256 6 0.925439 88 6 0.7392660 128 6 0.8120565 238 6 0.9199477 125 4 0.915938 114 6 0.9711400 0.605159 0.7717309 0.906420 0.8941799 0.915323 0.773810 1.0000000 1.0000000 0.8809524 0.8686045 0.760273 0.5634921 0.903130 0.8268398 0.9983683 NA 0.468736 0.7505669 0.8962270 0.285714 0.720167 0.755102 1.0000000 0.6451914 0.8776289 0.642857 0.714286 0.743834 0.6095679 0.8078093 0.9638243 0.4417989 0.39195678 0.50000000 0.41269841 0.556463 0.2795094 0.7935464 0.657428 0.7991244 0.7938983 0.7250706 0 0.863136 0.8648649 0.00899444 6 0.7104822 0.8816261 -0.17114388 0.8203705 6.8718e-01 insignificant 1.00000 1.0000e+00 insignificant 0.3622175 8.1200e-01 insignificant 1.00000 1.0000e+00 insignificant 0.04598006 0.2798265 lowCoverage 1.00000 lowCoverage 0.862948 0.6738428 2.0526e-01 6 0.6882116 0.5250591 0.16315250 2.0388e-07 1.0000e+00 hypermethylated 1.3413e-06 1.0000e+00 hypermethylated 1.7137e-05 1.0000e+00 hypermethylated 1.6478e-04 1.0000e+00 hypermethylated 0.21888134 3.4619e-03 lowCoverage 2.9844e-02 lowCoverage 0.864547 0.8383838 0.01772044 6 0.8829724 0.8594064 0.0235660 4.1938e-02 7.7038e-01 weaklyHypermeth 3.3821e-01 1.0000e+00 insignificant 8.4605e-03 9.8826e-01 weaklyHypermeth 1.1751e-01 1.0000e+00 insignificant 0.02069322 6.5682e-01 lowCoverage 1.0000e+00 lowCoverage 0.8642534 0.6738428 0.1904453 6 0.8725204 0.5250591 0.3474613 3.2601e-10 1.0000e+00 weaklyHypermeth 2.8850e-09 1.0000e+00 weaklyHypermeth 9.0840e-06 1.0000e+00 weaklyHypermeth 1.0441e-04 1.0000e+00 weaklyHypermeth 0.17290128 1.3448e-02 lowCoverage 9.4041e-02 lowCoverage 0.8669131 0.8383838 0.01313884 6 0.9015771 0.8594064 0.04217072 1.0130e-01 9.2903e-01 insignificant 6.4521e-01 1.0000e+00 insignificant 1.8843e-01 9.7719e-01 insignificant 1.0000e+00 1.0000000 insignificant -2.5287e-02 6.2332e-01 lowCoverage 1.00000000 lowCoverage 0.6778742 0.8383838 -0.2064833 6 0.7028632 0.8594064 -0.1565432 9.9866e-01 9.0660e-07 hypomethylated 1.0000e+00 9.7483e-06 hypomethylated 9.9890e-01 3.7586e-03 weaklyHypometh 1.0000e+00 3.1063e-02 weaklyHypometh -0.1981881 9.5505e-03 weaklyHypometh 7.2385e-02 weaklyHypometh chr16 80298550 80299550 49313 ENSG00000153815 0.902631 301 7 0.895121 343 5 0.798892 198 7 0.915343 294 7 0.9149262 108 5 0.943404 315 7 0.912883 153 7 0.935993 165 6 0.8791723 190 5 0.890476 135 5 0.902040 332 7 0.795918 49 5 0.9451451 218 5 0.8637296 135 5 0.8916471 231 5 0.8748299 30 3 NA 0 0 0.633341 251 7 0.865739 535 7 0.9033869 222 7 0.791027 97 5 0.843648 50 4 0.917284 141 5 0.943333 56 5 0.770221 52 3 0.9453877 414 9 0.7448594 140 4 0.771867 54 5 0.827836 285 5 0.9499892 425 9 0.954758 466 9 0.910972 330 9 0.6442782 188 7 0.3031674 128 5 0.4934339 337 5 0.835586 116 4 0.667812 116 5 0.8612458 425 9 0.935752 311 7 0.8815768 276 7 0.9557148 370 7 0.8839377 341 7 0.907609 180 9 0.9377710 0.886732 0.8513106 0.898562 0.8788845 0.905702 0.903428 0.9103129 0.8425792 0.9144621 0.8708746 0.739632 0.9359967 0.868418 0.8577602 0.9253212 NA 0.893106 0.8980716 0.9000184 0.858403 0.822534 0.824838 0.9514991 0.8000312 0.9340250 0.696056 0.752469 0.841586 0.9406015 0.9165614 0.8499598 0.6414289 0.36002777 0.47999759 0.70966058 0.729757 0.8383557 0.9033181 0.946788 0.9398387 0.8903477 0.8761848 5 0.871758 0.8676236 0.00599885 5 0.7911684 0.9417477 -0.15057931 0.9239657 7.6512e-02 insignificant 1.00000 7.7486e-01 insignificant 0.7913533 3.2783e-01 insignificant 1.00000 1.0000e+00 insignificant 0.01282008 0.6578649 insignificant 1.00000 insignificant 0.872351 0.5920550 2.8682e-01 7 0.9047142 0.7454109 0.15930332 9.6601e-16 1.0000e+00 hypermethylated 1.0733e-14 1.0000e+00 hypermethylated 3.4296e-07 1.0000e+00 hypermethylated 4.5728e-06 1.0000e+00 hypermethylated 0.24283141 3.6546e-02 weaklyHypermeth 2.0883e-01 insignificant 0.872143 0.8863329 -0.01513345 7 0.8293214 0.8635849 -0.0342635 9.9977e-01 9.4662e-02 insignificant 1.0000e+00 8.3037e-01 insignificant 9.9996e-01 2.2932e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03583286 1.2192e-01 insignificant 8.2380e-01 insignificant 0.8672249 0.5916031 0.2851892 5 0.8952267 0.6832933 0.2119334 9.1719e-11 1.0000e+00 hypermethylated 8.8191e-10 1.0000e+00 hypermethylated 2.3528e-05 1.0000e+00 hypermethylated 2.4766e-04 1.0000e+00 hypermethylated 0.23001133 4.3632e-02 weaklyHypermeth 2.3585e-01 insignificant 0.8675180 0.8869330 -0.02347793 5 0.9311564 0.9420926 -0.01093619 7.8074e-01 4.1472e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.4412e-01 2.8016e-01 insignificant 1.0000e+00 1.0000000 insignificant -4.8653e-02 9.7249e-02 insignificant 0.80537172 insignificant 0.5920550 0.8869330 -0.2989736 7 0.7454109 0.9420926 -0.1966817 1.0000e+00 5.2008e-07 hypomethylated 1.0000e+00 5.8398e-06 hypomethylated 1.0000e+00 8.7503e-05 hypomethylated 1.0000e+00 1.3239e-03 hypomethylated -0.2786643 2.2495e-02 weaklyHypometh 1.4513e-01 insignificant chr16 82767850 82768850 49343 LRRC50 ENSG00000154099 0.865338 352 5 0.719021 320 5 0.772043 220 5 0.869653 346 5 0.8499471 114 5 0.807568 394 5 0.666625 213 5 0.699792 197 6 0.7232731 232 5 0.661052 160 5 0.850859 275 5 0.844624 140 5 0.6727188 183 5 0.7831951 101 4 0.7902637 202 5 0.5833071 125 5 0.674865 65 4 0.691285 432 5 0.752395 270 5 0.8077198 372 5 0.608208 115 6 0.619048 67 4 0.826133 228 5 0.666840 132 6 0.705689 215 5 0.8744631 258 5 0.6155337 132 5 0.651888 177 6 0.800166 202 5 0.8724894 279 8 0.821042 274 5 0.832359 328 5 0.0602456 249 5 0.1329154 139 5 0.4063142 440 4 0.055556 59 4 0.126435 388 8 0.1860276 326 5 0.670994 346 5 0.7856087 278 5 0.8164529 359 5 0.7481004 333 5 0.791702 262 5 0.8706267 0.705123 0.7898405 0.890149 0.8785821 0.821779 0.800096 0.8155032 0.8461429 0.8182206 0.8438525 0.834214 0.8064512 0.773483 0.8133803 0.8032452 0.829354 0.727546 0.8138668 0.8736889 0.735317 0.717556 0.853358 0.7636564 0.8498036 0.8674282 0.794444 0.771647 0.781415 0.8505670 0.8315905 0.8441381 0.0874846 0.13978986 0.36586961 0.06281407 0.184390 0.1594837 0.8208591 0.829970 0.8398613 0.7848328 0.8336692 5 0.781031 0.7814346 0.00079618 5 0.7501012 0.6912214 0.05887989 0.2594357 8.7560e-01 insignificant 1.00000 1.0000e+00 insignificant 0.4980216 8.6820e-01 insignificant 1.00000 1.0000e+00 insignificant 0.01312240 0.7171214 lowCoverage 1.00000 lowCoverage 0.781031 0.1792208 6.0074e-01 5 0.7501012 0.1625400 0.58756129 6.0431e-47 1.0000e+00 hypermethylated 2.2382e-45 1.0000e+00 hypermethylated 8.6109e-13 1.0000e+00 hypermethylated 2.9727e-11 1.0000e+00 hypermethylated 0.59302833 3.1908e-05 lowCoverage 5.8015e-04 lowCoverage 0.780938 0.7306717 0.03184983 5 0.7084515 0.6575905 0.0508609 1.3146e-01 1.0024e-02 inconclusive 8.4447e-01 2.1731e-01 insignificant 1.7630e-01 4.5724e-03 inconclusive 1.0000e+00 1.8479e-01 insignificant -0.00829447 7.9727e-01 lowCoverage 1.0000e+00 lowCoverage 0.7843789 0.1723923 0.6131887 5 0.7536660 0.1264200 0.6272460 2.0245e-34 9.9926e-01 hypermethylated 6.5305e-33 1.0000e+00 hypermethylated 1.0499e-09 9.9994e-01 hypermethylated 2.6920e-08 1.0000e+00 hypermethylated 0.57990593 8.5104e-06 hypermethylated 2.0757e-04 hypermethylated 0.7814626 0.7306717 0.02820987 5 0.6767953 0.6575905 0.01920475 1.8733e-03 6.9669e-02 weaklyHypermeth 2.1048e-02 1.0000e+00 weaklyHypermeth 4.5384e-02 7.3556e-02 weaklyHypermeth 4.0793e-01 1.0000000 insignificant -2.1417e-02 5.9870e-01 insignificant 1.00000000 insignificant 0.1816380 0.7306717 -0.5713530 5 0.1832197 0.6575905 -0.4743708 9.9803e-01 4.3756e-20 hypomethylated 1.0000e+00 1.8232e-18 hypomethylated 9.9990e-01 3.4607e-07 hypomethylated 1.0000e+00 1.1163e-05 hypomethylated -0.6013228 1.6652e-05 hypomethylated 8.7643e-04 hypomethylated chr16 82893750 82894750 49346 WFDC1 ENSG00000103175 0.803234 238 5 0.862546 365 5 0.820652 178 5 0.700587 157 5 0.7547293 98 5 0.889422 242 5 0.864848 271 5 0.783716 163 5 0.8896435 197 5 0.926874 251 5 0.872945 277 5 0.672124 112 4 0.9135698 203 5 1.0000000 14 1 0.9022414 199 5 0.8896163 137 4 0.873981 259 4 0.540896 147 5 0.910183 263 5 0.9381533 219 5 0.737607 63 5 0.858095 24 3 0.850935 237 5 0.664541 104 6 0.961667 97 2 0.9174415 311 5 0.7208981 96 5 0.939394 73 4 0.915647 257 5 0.9201886 413 5 0.823566 316 5 0.856400 272 5 0.2829087 336 5 0.3842665 196 5 0.5338747 333 4 0.138889 28 3 0.453005 154 5 0.0384846 437 5 0.899619 264 5 0.8699739 257 5 0.9464550 299 5 0.8784129 104 5 0.881410 157 5 0.9307218 0.838151 0.8259125 0.708263 0.9041767 0.873798 0.890888 0.8791613 0.8615316 0.9124593 0.8779480 0.720095 0.9139930 0.920972 0.8700197 0.8761491 0.884200 0.734862 0.8988486 0.9537346 0.895984 0.778561 0.874336 0.9631442 0.9460426 0.9204669 0.803077 0.906531 0.900656 0.9078888 0.9595071 0.8788550 0.1862756 0.33311910 0.45098709 0.16083413 0.351960 0.0232452 0.8794501 0.861696 0.9370781 0.8829209 0.8841750 4 0.876441 0.9001326 -0.02581057 5 0.6744670 0.5905939 0.08387302 0.8051375 1.7943e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9412976 3.1170e-02 weaklyHypometh 1.00000 6.4938e-01 insignificant -0.00670023 0.8550494 lowCoverage 1.00000 lowCoverage 0.877797 0.2958221 6.0528e-01 5 0.8791472 0.2892079 0.58993928 3.5023e-41 1.0000e+00 hypermethylated 1.0945e-39 1.0000e+00 hypermethylated 8.6207e-13 1.0000e+00 hypermethylated 2.9727e-11 1.0000e+00 hypermethylated 0.53526001 5.8390e-04 lowCoverage 6.4165e-03 lowCoverage 0.876977 0.9074931 -0.01658686 5 0.7881782 0.9061051 -0.1179269 7.0513e-01 9.0942e-02 insignificant 1.0000e+00 8.1198e-01 insignificant 8.1963e-01 2.2767e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.05467606 5.9658e-02 lowCoverage 5.8162e-01 lowCoverage 0.9048889 0.2958221 0.6232865 5 0.9049503 0.2892079 0.6157424 7.5766e-30 1.0000e+00 hypermethylated 2.1046e-28 1.0000e+00 hypermethylated 1.7374e-10 1.0000e+00 hypermethylated 5.2650e-09 1.0000e+00 hypermethylated 0.54196024 4.8020e-04 lowCoverage 5.7167e-03 lowCoverage 0.9020824 0.9074931 0.00391503 5 0.7541253 0.9061051 -0.15197980 1.2532e-01 5.5507e-01 insignificant 7.4594e-01 1.0000e+00 insignificant 4.1769e-01 4.9379e-01 insignificant 1.0000e+00 1.0000000 insignificant -4.7976e-02 1.3798e-01 lowCoverage 0.98558307 lowCoverage 0.2958221 0.9074074 -0.5831601 5 0.2892079 0.8873261 -0.5981182 1.0000e+00 1.7402e-14 hypomethylated 1.0000e+00 4.5795e-13 hypomethylated 1.0000e+00 3.2434e-08 hypomethylated 1.0000e+00 1.6217e-06 hypomethylated -0.5899361 5.0736e-04 lowCoverage 1.0069e-02 lowCoverage chr16 83116150 83117150 49348 KIAA1609 ENSG00000140950 0.676921 99 9 0.717886 62 6 0.531990 82 7 0.839524 36 4 0.7012827 143 10 0.850992 125 9 0.582143 54 6 0.793068 83 9 0.6620635 57 5 0.733535 77 7 0.768671 147 10 0.763333 56 5 0.8330030 318 10 NA 0 0 0.5206133 77 9 0.6450617 44 4 0.744073 86 9 0.557669 120 8 0.784135 316 10 0.5916667 32 2 0.794719 106 9 0.593750 24 0 0.550292 95 10 0.871580 49 5 0.839815 51 8 0.6531548 132 10 0.8251984 79 9 0.647619 41 4 0.529524 75 8 0.7655263 167 10 0.810053 213 10 0.898859 186 10 0.6441198 121 10 0.6497259 212 10 0.8066667 134 8 0.590000 47 7 0.882784 103 9 0.7984211 159 10 0.482672 98 9 0.4629630 32 2 0.3565889 166 8 0.4150000 41 4 0.583652 131 8 0.6312677 0.676256 0.4620884 0.827233 0.6508982 0.817690 0.517218 0.7926206 0.6384298 0.7167543 0.7654670 0.726584 0.8218221 NA 0.4834949 0.6018259 0.711567 0.558190 0.7647926 0.4986226 0.799453 0.605473 0.526484 0.8587439 0.8350551 0.5988538 0.792962 0.681228 0.492719 0.7402856 0.7999265 0.8818627 0.6293066 0.60508601 0.79752066 0.53512397 0.917022 0.8108700 0.3731602 0.432507 0.3437437 0.3698347 0.5171685 0 0.728898 0.7536946 -0.02081554 10 0.7373850 0.7549982 -0.01761325 0.7867530 4.0361e-01 insignificant 1.00000 1.0000e+00 insignificant 0.7660429 1.6610e-01 insignificant 1.00000 1.0000e+00 insignificant -0.03179878 0.4837332 insignificant 1.00000 insignificant 0.728898 0.7293814 -8.6767e-05 10 0.7373850 0.7312719 0.00611311 3.6722e-01 4.0889e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.2498e-01 1.6680e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02874420 6.0382e-01 insignificant 1.0000e+00 insignificant 0.728898 0.4423077 0.27596142 8 0.7373850 0.4647683 0.2726167 2.6667e-19 9.9993e-01 hypermethylated 3.8095e-17 1.0000e+00 hypermethylated 3.4421e-08 9.9981e-01 hypermethylated 3.8245e-06 1.0000e+00 hypermethylated 0.23970018 7.9785e-04 hypermethylated 3.9892e-02 hypermethylated 0.7536946 0.7293814 0.0214969 10 0.7549982 0.7312719 0.0237264 2.8638e-01 3.4287e-01 insignificant 9.0055e-01 1.0000e+00 insignificant 6.7442e-01 3.1862e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00305458 9.6055e-01 insignificant 1.0000e+00 insignificant 0.7536946 0.4423077 0.29366840 8 0.7549982 0.4647683 0.29022993 4.1372e-15 9.9985e-01 hypermethylated 4.5969e-13 1.0000e+00 hypermethylated 3.3943e-07 9.9424e-01 hypermethylated 3.3943e-05 1.0000000 hypermethylated 2.7150e-01 2.8610e-04 hypermethylated 0.03576245 hypermethylated 0.7293814 0.4423077 0.2838839 8 0.7312719 0.4647683 0.2665036 3.3699e-11 9.9987e-01 hypermethylated 4.2123e-09 1.0000e+00 hypermethylated 1.3689e-06 9.9999e-01 hypermethylated 2.7378e-04 1.0000e+00 hypermethylated 0.2684444 1.6957e-03 weaklyHypermeth 2.2610e-02 weaklyHypermeth chr16 83133950 83134950 49353 KIAA1609 ENSG00000140950 0.690957 139 6 NA 0 0 NA 0 0 0.580284 72 6 NA 0 0 0.747387 98 6 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 1.000000 3 0 0.651437 150 6 0.706633 43 6 0.6591751 76 6 NA 0 0 NA 0 0 0.603741 57 3 NA 0 0 NA 0 0 0.6892845 112 7 NA 0 0 NA 0 0 NA 0 0 0.6677656 70 6 0.536364 55 6 0.816327 64 6 NA 0 0 NA 0 0 0.7061302 160 7 0.857143 25 1 NA 0 0 0.6945887 87 6 0.495926 96 3 0.6917749 96 6 0.7239860 110 7 0.6480159 72 3 0.639347 108 7 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0.650000 0.6564246 0.02684797 3 0.6687876 0.6938335 -0.02504591 0.3848372 6.2239e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.4569746 8.9328e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.05671418 0.4305988 lowCoverage 1.00000 lowCoverage 0.650000 0.7536765 3.0563e-03 3 0.6687876 0.7257129 -0.05692528 7.4125e-01 1.9897e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.5068e-01 2.2001e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.03321007 6.6528e-01 lowCoverage 1.0000e+00 lowCoverage 0.650000 0.6569647 0.01747385 3 0.6687876 0.6525477 0.0162399 2.2436e-01 4.1886e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 1.5821e-01 4.8223e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.07960051 2.4233e-01 lowCoverage 1.0000e+00 lowCoverage 0.6564246 0.7536765 -0.0264613 3 0.6938335 0.7257129 -0.0318794 7.8236e-01 9.9281e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.1966e-01 1.2707e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.08992425 2.5755e-01 lowCoverage 9.0131e-01 lowCoverage 0.6564246 0.6569647 0.01150998 3 0.6938335 0.6525477 0.04128583 2.3436e-01 1.9942e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 3.9596e-01 3.2156e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 2.2886e-02 7.1741e-01 lowCoverage 1.00000000 lowCoverage 0.7536765 0.6569647 0.0671536 6 0.7257129 0.6525477 0.0731652 1.1631e-01 7.0522e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.3173e-01 7.8348e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.1128106 1.5598e-01 lowCoverage 6.1896e-01 lowCoverage chr16 83184050 83185050 49355 KIAA1609 ENSG00000140950 0.740491 351 15 0.668415 306 15 0.684637 190 15 0.773658 316 15 0.7074353 146 14 0.724889 440 15 0.704828 210 15 0.738510 197 13 0.6960331 180 15 0.770530 169 15 0.722323 436 15 0.643899 89 11 0.7615689 254 15 0.7726190 119 11 0.7460789 242 15 0.8055324 136 11 0.828963 934 10 0.759904 281 15 0.806844 189 15 0.7772560 413 15 0.838914 106 8 0.850911 96 8 0.739048 239 15 0.777379 67 5 0.751091 168 15 0.6503079 330 15 0.7696744 142 12 0.574786 73 8 0.818846 206 15 0.7944946 235 14 0.710457 296 15 0.795401 553 15 0.7219709 247 13 0.7110181 194 15 0.7404748 269 15 0.850490 91 5 0.654027 122 13 0.6685136 334 15 0.815745 447 15 0.8052189 395 15 0.8012494 339 15 0.6920557 326 15 0.785386 370 15 0.7633576 0.759547 0.6640678 0.817680 0.7590673 0.744377 0.656171 0.7499739 0.7815441 0.7901924 0.7704525 0.704142 0.7802198 0.766814 0.7371493 0.8056104 0.814011 0.838478 0.8390428 0.7706394 0.776512 0.827125 0.770746 0.8208617 0.8029752 0.7676018 0.727443 0.628859 0.839745 0.7916465 0.7200308 0.7745107 0.7440456 0.66655283 0.73068945 0.80667267 0.695502 0.6701049 0.8286340 0.814773 0.8130037 0.7183543 0.8122959 8 0.773491 0.7724551 0.00763572 15 0.7138255 0.7453540 -0.03152852 0.6228566 5.8007e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9555719 3.5991e-01 insignificant 1.00000 1.0000e+00 insignificant -0.01422178 0.5835705 insignificant 1.00000 insignificant 0.774095 0.7255370 5.0720e-02 15 0.7328040 0.6870995 0.04570459 2.4070e-03 9.7760e-01 weaklyHypermeth 1.0842e-02 1.0000e+00 weaklyHypermeth 1.5898e-02 9.8878e-01 weaklyHypermeth 8.4115e-02 1.0000e+00 weaklyHypermeth 0.01730494 5.8953e-01 insignificant 1.0000e+00 insignificant 0.774490 0.8172616 -0.02808421 15 0.7524160 0.7967797 -0.0443636 9.7304e-01 3.3804e-02 weaklyHypometh 1.0000e+00 4.7182e-01 insignificant 9.8053e-01 8.1619e-02 insignificant 1.0000e+00 9.2749e-01 insignificant -0.03821048 1.7676e-01 insignificant 1.0000e+00 insignificant 0.7726181 0.7255370 0.0441526 15 0.7488237 0.6870995 0.0617243 5.6002e-03 9.9596e-01 weaklyHypermeth 2.4890e-02 1.0000e+00 weaklyHypermeth 3.3485e-02 9.9969e-01 weaklyHypermeth 1.6176e-01 1.0000e+00 insignificant 0.03152672 4.0741e-01 insignificant 1.0000e+00 insignificant 0.7720855 0.8172616 -0.03972760 15 0.7329047 0.7967797 -0.06387498 9.9632e-01 4.5413e-03 weaklyHypometh 1.0000e+00 1.8165e-01 insignificant 9.6748e-01 1.1326e-01 insignificant 1.0000e+00 1.0000000 insignificant -2.3989e-02 4.7047e-01 insignificant 1.00000000 insignificant 0.7253803 0.8171642 -0.0784476 15 0.7161326 0.7832316 -0.0670990 9.9983e-01 3.1944e-06 weaklyHypometh 1.0000e+00 3.0715e-05 weaklyHypometh 9.9771e-01 1.5288e-03 weaklyHypometh 1.0000e+00 1.3773e-02 weaklyHypometh -0.0555154 1.6141e-01 insignificant 6.2563e-01 insignificant chr16 83300950 83301950 49361 USP10 ENSG00000103194 0.796652 238 5 0.679266 218 9 0.607984 181 9 0.626147 168 6 0.6907648 75 7 0.719135 469 9 0.638697 199 9 0.732941 212 9 0.7082985 156 7 0.770586 136 7 0.721113 389 9 0.497834 112 6 0.7350616 221 7 0.9100000 15 1 0.7073214 98 5 0.6125421 58 6 0.583770 80 6 0.834526 134 6 0.838692 164 6 0.6792435 406 9 0.792775 94 8 0.796174 106 8 0.777434 171 6 0.818324 120 9 0.819266 97 9 0.7649208 235 9 0.6854910 96 8 0.744859 76 7 0.739458 147 9 0.7473309 316 9 0.805083 247 9 0.775106 376 9 0.6770728 176 9 0.5005710 130 9 0.6727862 158 9 0.729764 68 5 0.704161 95 9 0.7104001 232 9 0.760513 196 5 0.6684402 251 6 0.8017779 280 9 0.6834615 247 6 0.552258 218 6 0.7295262 0.682206 0.5972458 0.692388 0.7198366 0.702924 0.643324 0.7191086 0.6364589 0.7346069 0.7099185 0.577530 0.7101794 0.681901 0.6941811 0.6260447 0.623405 0.748952 0.8005571 0.7296175 0.725682 0.744114 0.685961 0.7783049 0.7855020 0.7348687 0.697992 0.742534 0.663954 0.7341291 0.7521971 0.7321081 0.5675193 0.49652095 0.77667290 0.64219564 0.676205 0.6519430 0.7809022 0.686206 0.7167476 0.7323295 0.7811751 4 0.725590 0.7592504 -0.03218523 9 0.6449033 0.7851590 -0.14025573 0.9964002 1.0025e-02 weaklyHypometh 1.00000 2.6382e-01 insignificant 0.9902109 1.8610e-02 weaklyHypometh 1.00000 5.1131e-01 insignificant -0.06765637 0.0099915 weaklyHypometh 0.81716 insignificant 0.725980 0.6868452 3.9773e-02 9 0.7165592 0.6720171 0.04454210 2.2597e-04 7.0233e-01 weaklyHypermeth 1.1471e-03 1.0000e+00 weaklyHypermeth 2.3200e-02 7.7184e-01 weaklyHypermeth 1.1600e-01 1.0000e+00 insignificant 0.03873631 3.6254e-01 insignificant 1.0000e+00 insignificant 0.725664 0.7256711 -0.02660866 6 0.6771848 0.6701113 0.0070735 9.9458e-01 8.9853e-02 insignificant 1.0000e+00 8.1191e-01 insignificant 9.8817e-01 1.6795e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01123873 8.2286e-01 insignificant 1.0000e+00 insignificant 0.7591346 0.6868452 0.0741262 9 0.7612878 0.6720171 0.0892707 3.4956e-06 9.3933e-01 weaklyHypermeth 2.2124e-05 1.0000e+00 weaklyHypermeth 8.0840e-04 9.6493e-01 weaklyHypermeth 5.8580e-03 1.0000e+00 weaklyHypermeth 0.10639268 2.4837e-02 weaklyHypermeth 1.5427e-01 insignificant 0.7592504 0.7262804 -0.00153199 6 0.7851590 0.7371225 0.04803654 4.9371e-01 2.4862e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.6410e-01 3.0916e-01 insignificant 1.0000e+00 1.0000000 insignificant 7.8895e-02 1.4132e-01 insignificant 0.99015280 insignificant 0.6868452 0.7266611 -0.0677426 6 0.6720171 0.7634694 -0.0914523 9.7816e-01 1.1075e-03 weaklyHypometh 1.0000e+00 6.7944e-03 weaklyHypometh 9.9499e-01 7.0846e-03 weaklyHypometh 1.0000e+00 4.9542e-02 weaklyHypometh -0.0274976 6.2973e-01 insignificant 1.0000e+00 insignificant chr16 83316150 83317150 49363 USP10 ENSG00000103194 0.629546 347 7 0.555376 312 7 0.610708 214 7 0.652228 314 7 0.5789983 143 7 0.739931 516 7 0.552473 142 7 0.530596 339 7 0.6488476 199 5 0.517574 215 5 0.733950 285 7 0.478895 207 5 0.6234469 292 7 0.5893901 196 5 0.6867797 249 7 0.6272109 101 5 0.511278 53 2 0.650575 354 7 0.599099 214 7 0.6950402 406 7 0.657761 144 5 0.550424 344 7 0.702054 254 7 0.546128 250 7 0.671497 233 6 0.6290671 351 7 0.7000719 267 5 0.669256 201 5 0.505727 178 7 0.5847782 350 7 0.620462 311 7 0.686244 405 7 0.7085983 286 7 0.5639944 151 7 0.6793468 202 7 0.635213 118 2 0.739129 209 7 0.6540809 287 7 0.616932 276 7 0.5614877 264 7 0.5724909 321 7 0.7222170 264 7 0.635479 264 7 0.6324839 0.581692 0.6358601 0.652393 0.6019937 0.753895 0.596210 0.5486962 0.6125546 0.4971060 0.7262319 0.500466 0.6409254 0.670863 0.6898279 0.6872549 0.550011 0.670102 0.6357163 0.6874754 0.722687 0.614102 0.625481 0.6133925 0.6619327 0.7012355 0.610258 0.637502 0.644124 0.7284229 0.6824261 0.6774780 0.7568296 0.60501799 0.73235885 0.71634417 0.766531 0.6957073 0.6677769 0.604160 0.6410903 0.7187832 0.6730361 5 0.628089 0.6894769 -0.01799844 7 0.6380390 0.5919732 0.04606572 0.6663275 1.4573e-01 insignificant 1.00000 9.9691e-01 insignificant 0.7945104 2.7114e-02 weaklyHypometh 1.00000 6.0253e-01 insignificant -0.01635884 0.5204067 insignificant 1.00000 insignificant 0.628140 0.7015164 -5.7626e-02 7 0.6552938 0.7083613 -0.05306743 1.6545e-02 7.5957e-08 weaklyHypometh 6.6982e-02 4.4681e-06 weaklyHypometh 2.5031e-01 4.2311e-04 weaklyHypometh 9.3688e-01 1.6924e-02 weaklyHypometh -0.05279674 1.0850e-01 insignificant 4.8884e-01 insignificant 0.627605 0.6465083 -0.01151398 7 0.6203358 0.6189365 0.0013993 3.8483e-01 1.8272e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.6125e-01 1.3131e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01112421 7.4548e-01 insignificant 1.0000e+00 insignificant 0.6900122 0.7015164 -0.0379383 7 0.6347199 0.7083613 -0.0736414 1.0279e-02 4.0204e-07 weaklyHypometh 4.2477e-02 2.8717e-05 weaklyHypometh 2.7828e-02 7.0334e-03 weaklyHypometh 1.3509e-01 2.9306e-01 insignificant -0.03643790 2.7197e-01 insignificant 9.3460e-01 insignificant 0.6900763 0.6465083 0.00607780 7 0.6301561 0.6189365 0.01121956 3.1137e-01 4.9645e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.2163e-01 7.0507e-01 insignificant 1.0000e+00 1.0000000 insignificant 5.2346e-03 8.8289e-01 insignificant 1.00000000 insignificant 0.7010392 0.6465083 0.0433506 7 0.6666986 0.6189365 0.0477621 5.5600e-03 2.5204e-01 weaklyHypermeth 1.2636e-01 8.6910e-01 insignificant 2.8007e-02 6.5447e-01 weaklyHypermeth 5.8348e-01 1.0000e+00 insignificant 0.0416725 3.0303e-01 insignificant 1.0000e+00 insignificant chr16 83319050 83320050 49364 USP10 ENSG00000103194 0.616703 192 6 0.735362 232 7 0.702189 85 4 0.666484 171 6 0.6323810 31 5 0.676234 304 6 0.771667 28 4 0.632720 84 5 0.5120879 49 5 0.587637 49 5 0.656758 180 5 0.280000 14 2 0.7051282 67 5 0.5857143 25 2 0.7333333 41 4 0.6666667 3 0 0.600000 6 0 0.649564 177 6 0.714257 116 5 0.6682556 175 6 0.595238 16 2 0.815476 15 2 0.663506 118 7 0.492424 32 2 0.600000 14 2 0.7128388 206 7 0.7083333 24 2 0.500000 16 2 0.505017 111 5 0.7179826 226 7 0.777346 253 7 0.730402 248 7 0.6487257 171 7 0.5111111 37 4 0.6821804 188 7 1.000000 5 0 0.663492 73 5 0.6462322 198 7 0.719038 141 7 0.7192466 160 6 0.6584386 148 6 0.6993468 145 6 0.655650 136 6 0.6604748 0.670739 0.6025142 0.617792 0.6799375 0.646786 0.783470 0.5984421 0.6658260 0.6748108 0.7138131 0.590164 0.7618747 0.724824 0.7540984 0.5362736 0.638216 0.650950 0.6913841 0.6634688 0.325527 0.694770 0.624736 0.6962245 0.6721311 0.6471380 0.710054 0.536557 0.583159 0.7447319 0.7014542 0.7350249 0.5930033 0.45537341 0.58980555 0.93792836 0.527713 0.5979013 0.7441669 0.712540 0.6058697 0.5613810 0.7389819 1 0.668148 0.7005473 -0.02727689 6 0.6580745 0.7296902 -0.07161571 0.9904376 6.6503e-02 insignificant 1.00000 7.3072e-01 insignificant 0.9193084 5.4832e-01 insignificant 1.00000 1.0000e+00 insignificant -0.01188997 0.7672240 lowCoverage 1.00000 lowCoverage 0.667986 0.6428571 3.9527e-02 6 0.6465838 0.6908606 -0.04427677 2.1033e-02 6.3488e-01 weaklyHypermeth 8.4133e-02 1.0000e+00 weaklyHypermeth 1.6313e-01 7.6953e-01 insignificant 6.4224e-01 1.0000e+00 insignificant -0.05229990 4.8451e-01 lowCoverage 1.0000e+00 lowCoverage 0.668153 0.6972603 -0.01500671 6 0.6675243 0.6815301 -0.0140058 7.7108e-01 1.6952e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.5740e-01 2.0655e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.05068707 7.6322e-02 lowCoverage 6.4680e-01 lowCoverage 0.7003130 0.6428571 0.0573242 6 0.6959015 0.6908606 0.0050409 5.7280e-03 9.4628e-01 weaklyHypermeth 2.5345e-02 1.0000e+00 weaklyHypermeth 2.2256e-01 9.3856e-01 insignificant 8.2428e-01 1.0000e+00 insignificant -0.04040993 6.0005e-01 lowCoverage 1.0000e+00 lowCoverage 0.7003922 0.6972603 0.01167697 6 0.7000779 0.6815301 0.01854774 3.9907e-01 7.5241e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.2421e-01 4.9561e-01 insignificant 1.0000e+00 1.0000000 insignificant -3.8797e-02 2.8677e-01 lowCoverage 1.00000000 lowCoverage 0.6417910 0.6972603 -0.0420305 6 0.6466978 0.6815301 -0.0348323 7.9779e-01 4.0782e-02 weaklyHypometh 1.0000e+00 1.7281e-01 insignificant 9.0540e-01 7.5125e-02 insignificant 1.0000e+00 3.6484e-01 insignificant 0.0016128 9.8190e-01 insignificant 1.0000e+00 insignificant chr16 83376550 83377550 49369 USP10 ENSG00000103194 0.887204 104 6 0.747778 153 6 0.858707 132 6 0.878901 110 5 0.8554459 80 5 0.860827 154 6 0.828364 121 6 0.860958 121 6 0.8812181 108 6 0.904735 120 6 0.898753 211 7 0.800905 50 5 0.8640589 163 6 0.6875000 25 2 0.9001461 107 5 0.6666667 35 3 0.628025 259 4 0.679286 95 6 0.909249 106 5 0.8398329 153 6 0.819444 54 3 0.768519 37 2 0.809536 107 6 0.888281 70 6 0.892857 32 3 0.9020440 171 8 0.9473491 89 5 0.937179 33 3 0.951389 121 5 0.9217023 215 6 0.894596 165 6 0.846714 170 6 0.4680633 173 6 0.7113983 103 5 0.9086441 154 5 0.858333 34 2 0.777495 83 4 0.8381370 123 6 0.847031 123 5 0.8645702 140 6 0.9435020 163 4 0.9519481 138 6 0.756597 142 5 0.9001101 0.769172 0.8259673 0.866387 0.8589898 0.887434 0.901557 0.8845735 0.8505311 0.9030699 0.8593363 0.837331 0.8404368 0.905687 0.9254641 0.7843137 0.844210 0.909094 0.9147943 0.8531884 0.862200 0.764450 0.819713 0.8946487 0.9099822 0.8991280 0.900763 0.930116 0.942992 0.9049304 0.9099125 0.8553005 0.5110070 0.44649161 0.90730918 0.74673203 0.601440 0.8497387 0.8380616 0.863816 0.9180115 0.9270690 0.6339817 2 0.841204 0.8908228 -0.01906854 6 0.8804557 0.8945976 -0.01414190 0.9307741 1.6161e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9623478 1.8144e-01 insignificant 1.00000 1.0000e+00 insignificant -0.05970630 0.0297389 lowCoverage 1.00000 lowCoverage 0.838803 0.6865672 1.6931e-01 6 0.7900788 0.6061645 0.18391432 1.2285e-06 9.9998e-01 weaklyHypermeth 7.7753e-06 1.0000e+00 weaklyHypermeth 2.0415e-02 9.9977e-01 weaklyHypermeth 1.0469e-01 1.0000e+00 insignificant 0.06158277 3.9852e-01 lowCoverage 1.0000e+00 lowCoverage 0.841204 0.8229462 -0.00340460 6 0.8804557 0.8871116 -0.0066559 1.0760e-01 3.7694e-01 insignificant 7.3197e-01 1.0000e+00 insignificant 6.3317e-01 4.7454e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.05080174 2.5564e-01 insignificant 1.0000e+00 insignificant 0.8908228 0.6906907 0.1925403 6 0.8945976 0.7577056 0.1368919 2.1279e-05 9.9999e-01 weaklyHypermeth 1.2444e-04 1.0000e+00 weaklyHypermeth 4.7310e-03 9.9762e-01 weaklyHypermeth 2.7667e-02 1.0000e+00 weaklyHypermeth 0.12128907 1.2251e-01 lowCoverage 5.0928e-01 lowCoverage 0.8908228 0.8229462 0.04462587 6 0.8945976 0.8871116 0.00748597 1.1505e-01 8.5612e-01 insignificant 7.0155e-01 1.0000e+00 insignificant 2.8622e-01 9.4816e-01 insignificant 1.0000e+00 1.0000000 insignificant 8.9046e-03 8.2928e-01 lowCoverage 1.00000000 lowCoverage 0.6906907 0.8229462 -0.1645483 6 0.7577056 0.8871116 -0.1294060 9.9617e-01 1.0007e-02 weaklyHypometh 1.0000e+00 5.1055e-02 weaklyHypometh 9.9409e-01 1.2506e-01 insignificant 1.0000e+00 5.4375e-01 insignificant -0.1123845 1.6886e-01 lowCoverage 6.4450e-01 lowCoverage chr16 83429250 83430250 49371 CRISPLD2 ENSG00000103196 0.921944 334 9 0.575192 258 9 0.800910 252 9 0.925974 407 9 0.8588235 161 9 0.846655 616 9 0.742250 204 9 0.886766 263 9 0.6832978 266 8 0.806816 249 9 0.909044 283 9 0.853564 150 8 0.7346277 252 8 0.7613833 220 9 0.8530882 254 9 0.6822367 90 7 0.878307 58 4 0.775226 498 9 0.851841 197 7 0.8512368 392 9 0.867542 153 9 0.819628 200 9 0.878388 260 9 0.724862 155 9 0.833547 315 7 0.9001241 330 9 0.7331067 163 9 0.597579 128 8 0.653975 232 7 0.8543991 363 9 0.905717 333 9 0.913145 437 9 0.6519500 273 11 0.6964955 203 7 0.6331909 96 3 0.724544 121 4 0.696900 180 8 0.7139962 313 9 0.841187 350 9 0.7915875 318 9 0.8366479 424 7 0.8321803 392 9 0.853842 383 9 0.8998245 0.699823 0.7848615 0.910156 0.8355138 0.853066 0.821301 0.8252344 0.7810686 0.8435128 0.8476774 0.798599 0.7788609 0.828746 0.7763618 0.7842478 0.710585 0.755454 0.8193791 0.8813758 0.931098 0.726501 0.855702 0.8573178 0.8657791 0.8519348 0.719994 0.804276 0.886280 0.8534423 0.8141112 0.8883869 0.4843226 0.51069482 0.83311417 0.44704916 0.743587 0.5554625 0.7821845 0.854522 0.7571448 0.7606451 0.8169942 4 0.830926 0.8526728 -0.02460495 9 0.6848889 0.7312934 -0.04640448 0.9948735 1.0172e-01 insignificant 1.00000 8.3380e-01 insignificant 0.9834821 5.2325e-01 insignificant 1.00000 1.0000e+00 insignificant 0.00312477 0.9326557 insignificant 1.00000 insignificant 0.831850 0.6146712 2.1535e-01 9 0.7827301 0.6844740 0.09825616 6.9229e-08 9.8846e-01 hypermethylated 4.8076e-07 1.0000e+00 hypermethylated 5.9392e-03 9.6364e-01 weaklyHypermeth 3.4937e-02 1.0000e+00 weaklyHypermeth 0.12377963 6.5895e-05 weaklyHypermeth 1.0702e-03 weaklyHypermeth 0.831325 0.8007499 0.02182411 9 0.7660171 0.7757702 -0.0097531 4.0218e-01 3.8578e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.4353e-01 6.6167e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02112982 3.6757e-01 insignificant 1.0000e+00 insignificant 0.8537382 0.6146712 0.2371251 9 0.8179067 0.6844740 0.1334327 1.3197e-06 9.6750e-01 hypermethylated 9.0394e-06 1.0000e+00 hypermethylated 5.1226e-03 8.8655e-01 weaklyHypermeth 2.9440e-02 1.0000e+00 weaklyHypermeth 0.12065486 2.7120e-03 weaklyHypermeth 2.7394e-02 weaklyHypermeth 0.8535948 0.8007499 0.04939304 9 0.7654380 0.7757702 -0.01033223 1.1001e-01 7.1355e-01 insignificant 6.8105e-01 1.0000e+00 insignificant 1.6837e-01 7.0140e-01 insignificant 1.0000e+00 1.0000000 insignificant -2.4255e-02 4.6247e-01 insignificant 1.00000000 insignificant 0.6148649 0.8011790 -0.1942981 9 0.7152197 0.8404177 -0.1251981 9.9721e-01 2.9318e-03 weaklyHypometh 1.0000e+00 1.6471e-02 weaklyHypometh 9.9170e-01 4.8535e-02 weaklyHypometh 1.0000e+00 2.5411e-01 insignificant -0.1449095 2.7656e-05 weaklyHypometh 1.2571e-03 weaklyHypometh chr16 83520850 83521850 49375 ENSG00000213275 0.890110 503 12 0.714982 371 12 0.694191 544 12 0.888997 597 12 0.7524759 355 12 0.918544 612 12 0.894933 243 12 0.763358 485 12 0.7965205 359 12 0.821673 368 12 0.833610 617 12 0.818107 138 11 0.7852479 402 12 0.8832829 335 11 0.8788581 479 12 0.6956286 98 7 0.362179 30 2 0.858815 679 12 0.923647 833 12 0.8838603 440 12 0.683611 185 12 0.820577 299 12 0.885131 445 12 0.694849 296 13 0.913360 191 12 0.9001234 535 12 0.6324653 608 12 0.633924 167 12 0.892953 639 12 0.8919872 573 12 0.660592 521 12 0.944129 555 12 0.1251832 474 12 0.1572786 299 12 0.1166667 181 8 0.613175 67 5 0.123978 677 12 0.6148618 673 13 0.860040 472 12 0.8537991 398 12 0.8647673 542 12 0.9027273 409 12 0.819195 428 12 0.8986788 0.728336 0.7012480 0.895008 0.8752108 0.895998 0.864514 0.8916416 0.8817342 0.8896563 0.9025094 0.863241 0.9185217 0.919420 0.8710210 0.8483254 NA 0.857785 0.9192422 0.8746145 0.867025 0.816840 0.884839 0.8738152 0.8977569 0.8864507 0.775247 0.867560 0.869406 0.8734434 0.8735080 0.9316998 0.1021186 0.15453267 0.13630138 0.54571568 0.105540 0.5147446 0.8932452 0.842648 0.8614191 0.8894658 0.8904341 12 0.868049 0.8663742 -0.00204097 12 0.7277694 0.6307092 0.09706028 0.7380711 6.5433e-01 insignificant 1.00000 1.0000e+00 insignificant 0.5995718 3.4599e-01 insignificant 1.00000 1.0000e+00 insignificant 0.00680907 0.8824047 insignificant 1.00000 insignificant 0.868309 0.2644454 6.1154e-01 12 0.7562406 0.2914581 0.46478247 2.6439e-82 1.0000e+00 hypermethylated 3.3049e-80 1.0000e+00 hypermethylated 8.2883e-22 9.9996e-01 hypermethylated 1.1840e-19 1.0000e+00 hypermethylated 0.51109387 3.2176e-03 weaklyHypermeth 2.8520e-02 weaklyHypermeth 0.868688 0.8674967 -0.00631302 12 0.7840184 0.7871463 -0.0031279 9.1528e-01 3.3815e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.4860e-01 2.6707e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.05715474 8.0797e-02 insignificant 6.6775e-01 insignificant 0.8670659 0.2644454 0.6092669 12 0.7095478 0.2914581 0.4180897 1.8955e-56 9.9997e-01 hypermethylated 1.5796e-54 1.0000e+00 hypermethylated 3.8317e-19 1.0000e+00 hypermethylated 5.4739e-17 1.0000e+00 hypermethylated 0.50428479 3.0942e-03 weaklyHypermeth 2.9271e-02 weaklyHypermeth 0.8682000 0.8674967 -0.00467458 12 0.6939228 0.7871463 -0.09322345 8.9571e-01 3.5189e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.7442e-01 7.0900e-01 insignificant 1.0000e+00 1.0000000 insignificant -6.3964e-02 1.1586e-01 insignificant 0.88442397 insignificant 0.2620660 0.8673787 -0.6231871 12 0.2516294 0.7729560 -0.5213266 1.0000e+00 1.9460e-32 hypomethylated 1.0000e+00 1.9460e-30 hypomethylated 1.0000e+00 1.2403e-11 hypomethylated 1.0000e+00 1.7718e-09 hypomethylated -0.5682486 2.4004e-03 weaklyHypometh 2.9398e-02 weaklyHypometh chr16 83576250 83577250 49378 ENSG00000213275 0.607841 102 5 0.743567 67 5 0.856061 36 3 0.846296 123 4 0.8333333 42 6 0.818129 114 6 0.619841 72 6 0.711599 80 6 0.7230159 61 6 0.700844 52 3 0.811141 122 6 0.828042 26 3 0.8310983 94 4 0.8367965 30 4 0.8472222 47 4 0.6000000 13 1 0.611842 33 3 0.619053 139 5 0.668498 32 3 0.7537879 104 5 0.832011 35 4 0.670833 38 3 0.680159 77 6 0.719841 48 5 0.833333 46 5 0.8533951 85 5 0.5647210 50 4 0.238095 17 1 0.776321 54 4 0.8215539 66 4 0.798413 70 5 0.650994 135 5 0.7408730 100 6 0.7510684 43 3 0.5000000 28 3 0.550000 15 0 0.616966 57 6 0.6305556 48 4 0.793899 74 5 0.8386809 93 4 0.7807392 133 5 0.7206607 84 5 0.822801 126 5 0.7710496 0.685914 0.8640029 0.903226 0.9124424 0.860894 0.669201 0.7958850 0.7745776 0.7982290 0.8246005 0.913210 0.8938636 0.862380 0.8662634 0.8181959 0.633124 0.750329 0.7913860 0.8490958 0.834537 0.839925 0.812308 0.7343190 0.9032258 0.9189068 0.778367 0.367896 0.789984 0.8376546 0.8522273 0.8330246 0.8278418 0.82340778 0.42678397 0.52465438 0.804299 0.7244624 0.8477823 0.892099 0.8683464 0.8933128 0.8865367 0 0.729302 0.7381616 0.01007198 4 0.7839908 0.7169859 0.06700482 0.4866949 6.0343e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.2231546 4.9579e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.04009461 0.4688041 lowCoverage 1.00000 lowCoverage 0.729302 0.6391753 5.2175e-02 5 0.7839908 0.5925400 0.19145080 4.4885e-03 9.9250e-01 weaklyHypermeth 1.9515e-02 1.0000e+00 weaklyHypermeth 8.7869e-03 9.9693e-01 weaklyHypermeth 4.9089e-02 1.0000e+00 weaklyHypermeth 0.11182333 4.2108e-02 lowCoverage 2.3393e-01 lowCoverage 0.729302 0.7033399 0.01833143 5 0.7839908 0.8480575 -0.0640667 6.7274e-01 4.4268e-03 inconclusive 1.0000e+00 1.3834e-01 insignificant 2.9312e-01 1.1862e-02 inconclusive 1.0000e+00 3.1169e-01 insignificant -0.04795568 1.2628e-01 lowCoverage 8.3632e-01 lowCoverage 0.7381616 0.6391753 0.0344467 5 0.7169859 0.5925400 0.1244460 3.2596e-02 9.5239e-01 weaklyHypermeth 1.2394e-01 1.0000e+00 insignificant 7.1964e-02 9.9575e-01 insignificant 3.1289e-01 1.0000e+00 insignificant 0.07172873 2.8202e-01 lowCoverage 9.5924e-01 lowCoverage 0.7385257 0.7019608 -0.01337138 4 0.7523627 0.7420503 0.01031240 9.5680e-01 7.1501e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.8222e-01 3.6051e-02 lowCoverage 1.0000e+00 0.9487155 lowCoverage -8.8050e-02 1.2298e-01 lowCoverage 0.93169356 lowCoverage 0.6391753 0.7033399 -0.0358906 5 0.5925400 0.8480575 -0.2555175 9.1368e-01 2.8105e-04 weaklyHypometh 1.0000e+00 1.9654e-03 weaklyHypometh 9.9991e-01 2.3528e-03 weaklyHypometh 1.0000e+00 2.0459e-02 weaklyHypometh -0.1597790 9.6272e-03 lowCoverage 7.2385e-02 lowCoverage chr16 83727850 83728850 49389 FAM92B ENSG00000153789 0.832903 640 21 0.566863 584 25 0.608956 576 25 0.718566 588 19 0.6595256 382 24 0.848278 974 25 0.664346 470 22 0.793933 477 21 0.7268300 446 22 0.709800 410 21 0.765151 836 24 0.761465 233 17 0.7301701 580 22 0.6029941 272 14 0.5978327 586 21 0.5940222 140 11 0.394701 119 9 0.624058 856 18 0.720354 808 24 0.6373343 669 23 0.721063 347 19 0.482135 157 12 0.678489 455 23 0.739257 248 20 0.717219 403 15 0.8021129 798 24 0.6585317 494 19 0.699871 202 18 0.699029 573 21 0.7637229 887 25 0.708726 926 25 0.744726 731 23 0.2181096 709 25 0.3242826 636 24 0.0623374 716 19 0.480853 331 9 0.107528 599 24 0.3089952 1042 25 0.695088 606 23 0.6853252 574 23 0.6181895 674 21 0.5210039 556 17 0.754979 388 19 0.8552593 0.690870 0.6030463 0.800993 0.7604984 0.865497 0.715076 0.8309673 0.7568358 0.8268991 0.8078718 0.867745 0.8031720 0.728060 0.7972197 0.6330444 0.463974 0.682836 0.7164278 0.6847451 0.829574 0.557320 0.727633 0.7452897 0.7919818 0.8494920 0.694549 0.679953 0.739454 0.8073837 0.7451935 0.7778030 0.2928344 0.38008057 0.12242069 0.49910493 0.139343 0.4082723 0.8092644 0.780034 0.7042780 0.6290599 0.7737004 12 0.762987 0.7645354 -0.00749842 25 0.7529513 0.7078562 0.04509511 0.9680045 3.9298e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9141365 1.7908e-01 insignificant 1.00000 1.0000e+00 insignificant -0.02333611 0.4828289 insignificant 1.00000 insignificant 0.762943 0.3043155 4.6970e-01 25 0.7346514 0.2466224 0.48802903 5.1666e-126 1.0000e+00 hypermethylated 2.5833e-123 1.0000e+00 hypermethylated 8.7227e-33 1.0000e+00 hypermethylated 4.3614e-30 1.0000e+00 hypermethylated 0.42755313 5.2378e-04 hypermethylated 5.9520e-03 hypermethylated 0.762943 0.6877682 0.04899804 22 0.7346514 0.6270620 0.1075893 3.0967e-07 8.5859e-01 weaklyHypermeth 7.9403e-06 1.0000e+00 weaklyHypermeth 2.1326e-03 4.2651e-01 weaklyHypermeth 4.1634e-02 1.0000e+00 weaklyHypermeth 0.02298693 6.3501e-01 insignificant 1.0000e+00 insignificant 0.7643076 0.3043155 0.4763775 25 0.6862159 0.2466224 0.4395935 4.3507e-105 1.0000e+00 hypermethylated 2.1753e-102 1.0000e+00 hypermethylated 7.2994e-27 1.0000e+00 hypermethylated 3.6497e-24 1.0000e+00 hypermethylated 0.45088924 4.1080e-04 hypermethylated 5.0716e-03 hypermethylated 0.7647627 0.6879914 0.04916216 22 0.7169695 0.6527819 0.06418757 3.8632e-06 8.9365e-01 weaklyHypermeth 8.9841e-05 1.0000e+00 weaklyHypermeth 2.2526e-02 9.5306e-01 weaklyHypermeth 2.4484e-01 1.0000000 insignificant 4.6323e-02 3.4795e-01 insignificant 1.00000000 insignificant 0.3044019 0.6876565 -0.3765493 22 0.2456183 0.6127183 -0.3671000 1.0000e+00 6.0576e-40 hypomethylated 1.0000e+00 1.0096e-37 hypomethylated 1.0000e+00 1.1635e-15 hypomethylated 1.0000e+00 2.9087e-13 hypomethylated -0.4045662 5.7937e-04 hypomethylated 1.1142e-02 hypomethylated chr16 83811250 83812250 49396 FAM92B ENSG00000153789 0.806193 257 12 0.690176 225 14 0.559804 274 14 0.591424 181 11 0.7629340 204 14 0.889194 211 13 0.643995 264 14 0.708709 200 14 0.7223327 196 11 0.814562 199 14 0.712118 465 11 0.625994 170 13 0.3915236 452 14 0.5000000 22 3 0.6066096 259 14 0.4488511 110 10 0.651113 156 10 0.301915 410 14 0.700097 287 13 0.5435753 227 14 0.840706 109 8 0.322217 134 7 0.598378 222 13 0.667212 76 6 0.536922 110 5 0.6805282 241 14 0.7740747 155 12 0.750057 86 4 0.748083 222 14 0.6108633 394 14 0.590675 309 14 0.805654 306 13 0.1439778 421 14 0.1045607 461 14 0.2192113 453 13 0.000000 45 3 0.147059 108 8 0.1260076 424 14 0.296737 298 13 0.4003805 227 13 0.2510348 330 12 0.2407801 223 8 0.221426 215 12 0.7359813 0.634045 0.5188461 0.629914 0.6975426 0.865779 0.677601 0.6548501 0.6692392 0.7925012 0.7084734 0.552550 0.3978043 NA 0.5603230 0.4964180 0.642227 0.290825 0.6726045 0.5480728 0.822067 0.266909 0.637104 0.7409252 0.5819415 0.6558463 0.840790 0.759804 0.677441 0.6108001 0.5235591 0.7950823 0.0981673 0.06863649 0.14750167 0.08351157 0.085627 0.0715437 0.2549306 0.293383 0.1970792 0.2409908 0.1885846 4 0.622562 0.6737288 -0.06160365 13 0.6092779 0.6405076 -0.03122967 0.9981837 1.3664e-02 weaklyHypometh 1.00000 3.1054e-01 insignificant 0.9937624 1.0412e-01 insignificant 1.00000 1.0000e+00 insignificant -0.02689151 0.6140504 insignificant 1.00000 insignificant 0.622562 0.1218619 4.8326e-01 14 0.6092779 0.1388606 0.47041736 7.8046e-65 1.0000e+00 hypermethylated 6.0036e-63 1.0000e+00 hypermethylated 4.8863e-26 1.0000e+00 hypermethylated 8.8792e-24 1.0000e+00 hypermethylated 0.51008673 8.9260e-10 hypermethylated 3.7192e-08 hypermethylated 0.622848 0.1802011 0.39620474 13 0.6105150 0.2926944 0.3178206 1.5850e-30 1.0000e+00 hypermethylated 3.9625e-28 1.0000e+00 hypermethylated 2.8300e-17 1.0000e+00 hypermethylated 9.4334e-15 1.0000e+00 hypermethylated 0.35148430 2.6785e-06 hypermethylated 1.1836e-03 hypermethylated 0.6737288 0.1218619 0.5180727 13 0.6405076 0.1388606 0.5016470 3.7835e-58 1.0000e+00 hypermethylated 3.4396e-56 1.0000e+00 hypermethylated 8.8451e-21 1.0000e+00 hypermethylated 1.4742e-18 1.0000e+00 hypermethylated 0.53697824 1.1971e-08 hypermethylated 6.3005e-07 hypermethylated 0.6753081 0.1802011 0.45851232 13 0.6925753 0.2926944 0.39988093 1.0400e-32 1.0000e+00 hypermethylated 5.2002e-30 1.0000e+00 hypermethylated 1.5864e-17 1.0000e+00 hypermethylated 7.9319e-15 1.0000000 hypermethylated 3.7838e-01 4.0151e-06 hypermethylated 0.00179326 hypermethylated 0.1220534 0.1802011 -0.0122520 13 0.1573753 0.2926944 -0.1353190 1.0680e-01 3.9077e-21 weaklyHypometh 1.0000e+00 1.8608e-19 weaklyHypometh 3.6826e-01 2.7731e-11 weaklyHypometh 1.0000e+00 2.9348e-09 weaklyHypometh -0.1586024 5.6743e-03 weaklyHypometh 5.0073e-02 weaklyHypometh chr16 83825850 83826850 49399 FAM92B ENSG00000153789 0.120192 151 8 0.083333 201 9 0.051354 312 9 0.100000 168 4 0.0000000 305 11 0.201885 295 11 0.015625 282 11 0.048785 280 9 0.1335470 201 8 0.020130 355 11 0.014992 349 9 0.021203 348 12 0.0428610 381 12 0.0059524 198 7 0.0126162 415 12 0.0192308 300 11 0.083333 71 8 0.087857 173 4 0.116883 219 9 0.2397569 255 10 0.047543 155 8 0.081250 120 5 0.062882 148 9 0.047319 144 10 0.000000 69 4 0.0986352 342 9 0.0846296 217 11 0.017723 213 9 0.035390 190 11 0.0132217 397 9 0.090909 326 9 0.228011 229 9 0.0109509 184 10 0.0257576 141 8 0.1142857 202 6 0.020408 42 5 0.076165 208 10 0.0511364 208 9 0.243757 212 8 0.1038194 171 9 0.2291667 170 4 0.0581028 179 9 0.100000 151 7 0.0076034 0.000000 0.0124457 0.000000 0.0000000 0.051034 0.002281 0.0071972 0.0210868 0.0026543 0.0108391 0.011822 0.0099441 0.011575 0.0057149 0.0042579 0.000000 0.016419 0.0048662 0.0179373 0.010814 0.012875 0.026639 0.0045429 0.0032144 0.0086335 0.007840 0.020227 0.011237 0.0049383 0.0000000 0.0209341 0.0097155 0.00460075 0.00034758 0.04048142 0.014116 0.0036865 0.0434437 0.019870 0.0207269 0.0197923 0.0024331 4 0.022818 0.0219608 -0.00034156 9 0.1664082 0.1318190 0.03458915 0.6813899 3.2806e-01 insignificant 1.00000 1.0000e+00 insignificant 0.8694077 5.9456e-01 insignificant 1.00000 1.0000e+00 insignificant 0.00368401 0.8730021 insignificant 1.00000 insignificant 0.018547 0.0192893 5.6440e-03 9 0.0377629 0.0432268 -0.00546389 5.1228e-01 6.0870e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.8843e-01 6.3723e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02119282 3.4974e-01 insignificant 1.0000e+00 insignificant 0.022701 0.0283447 -0.00779774 8 0.1913565 0.1680769 0.0232795 6.5552e-01 7.0065e-04 weaklyHypometh 1.0000e+00 3.7200e-02 weaklyHypometh 7.5256e-01 2.6784e-02 weaklyHypometh 1.0000e+00 5.3569e-01 insignificant -0.07599249 1.1452e-01 insignificant 7.9194e-01 insignificant 0.0204563 0.0192893 0.0039659 9 0.0504340 0.0432268 0.0072072 6.9058e-01 8.4524e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.6238e-01 8.4214e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01750880 4.7131e-01 insignificant 1.0000e+00 insignificant 0.0213186 0.0283447 -0.00784259 8 0.1470717 0.1680769 -0.02100523 8.3500e-01 7.6003e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 8.8004e-01 2.5168e-01 insignificant 1.0000e+00 1.0000000 insignificant -7.9677e-02 1.0357e-01 insignificant 0.82196944 insignificant 0.0193483 0.0228833 -0.0132624 8 0.0504312 0.0573184 -0.0068872 9.6625e-01 1.9097e-01 insignificant 1.0000e+00 6.8450e-01 insignificant 9.8043e-01 5.3181e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0971853 5.8673e-02 insignificant 2.9945e-01 insignificant chr16 83852950 83853950 49400 FAM92B ENSG00000153789 0.824762 84 5 0.776538 94 5 0.760040 180 5 0.700000 22 2 0.9098039 99 5 0.959556 91 5 0.873108 220 5 0.793033 70 5 0.8609317 133 5 0.924727 105 5 0.884306 218 5 0.915860 167 5 0.6653065 128 5 NA 0 0 0.7293687 144 5 0.9332831 168 5 0.818444 160 5 0.574444 31 3 0.877411 98 5 0.7680135 103 5 0.874748 99 5 0.400000 15 0 0.834588 111 5 0.780948 118 5 0.800000 14 0 0.7355938 144 5 0.9436728 83 5 0.890021 58 5 0.814327 93 5 0.8655700 97 5 0.744257 90 5 0.886534 177 5 0.8683598 131 5 0.8731361 159 5 1.0000000 100 3 0.256643 42 3 0.977019 87 5 0.3323433 139 5 0.201254 106 5 0.6324754 128 5 0.5366667 17 1 0.5268398 74 5 0.360714 27 2 0.8172011 0.752570 0.7486512 0.691131 0.8869701 0.951152 0.876327 0.7921317 0.8392814 0.8996222 0.8862313 0.896770 0.6642179 NA 0.7199591 0.9217069 0.797146 0.584455 0.8845202 0.7391499 0.846709 0.426606 0.826904 0.7563908 0.7889908 0.7216263 0.939034 0.905944 0.779404 0.8676238 0.7342071 0.8934294 0.8994515 0.90440667 0.91993955 0.28469237 0.976751 0.3718717 0.1968848 0.623899 0.5743119 0.5116963 0.3695937 2 0.825486 0.8152866 0.00992794 5 0.8369497 0.8262510 0.01069869 0.4727200 8.8181e-01 insignificant 1.00000 1.0000e+00 insignificant 0.6282921 7.4277e-01 insignificant 1.00000 1.0000e+00 insignificant 0.02084361 0.6604693 lowCoverage 1.00000 lowCoverage 0.825486 0.7629179 5.0325e-02 5 0.8369497 0.7570590 0.07989071 3.6399e-02 7.5932e-01 weaklyHypermeth 1.3582e-01 1.0000e+00 insignificant 5.7518e-01 2.6285e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.10044829 4.9758e-01 lowCoverage 1.0000e+00 lowCoverage 0.825486 0.4573864 0.37411252 5 0.8369497 0.4562824 0.3806673 4.5085e-21 1.0000e+00 hypermethylated 7.5142e-19 1.0000e+00 hypermethylated 3.8730e-10 1.0000e+00 hypermethylated 6.4551e-08 1.0000e+00 hypermethylated 0.36677508 6.5626e-03 lowCoverage 1.5262e-01 lowCoverage 0.8152866 0.7629179 0.0441107 5 0.8262510 0.7570590 0.0691920 1.3661e-01 6.8638e-01 insignificant 4.6944e-01 1.0000e+00 insignificant 7.3783e-01 3.6793e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.07960468 5.9536e-01 lowCoverage 1.0000e+00 lowCoverage 0.8152866 0.4573864 0.36369508 5 0.8262510 0.4562824 0.36996859 1.3502e-14 1.0000e+00 hypermethylated 1.1854e-12 1.0000e+00 hypermethylated 1.0073e-07 1.0000e+00 hypermethylated 1.2591e-05 1.0000000 hypermethylated 3.4593e-01 6.2551e-03 lowCoverage 0.22339782 lowCoverage 0.7629179 0.4573864 0.3223508 5 0.7570590 0.4562824 0.3007766 4.9446e-04 9.9989e-01 hypermethylated 1.4543e-02 1.0000e+00 hypermethylated 1.4471e-02 9.9925e-01 weaklyHypermeth 3.6177e-01 1.0000e+00 insignificant 0.2663268 1.2759e-01 lowCoverage 5.2940e-01 lowCoverage chr16 83877150 83878150 49401 TMEM148 ENSG00000179219 0.907668 399 15 0.787657 437 15 0.814100 246 16 0.883347 319 15 0.9003083 272 16 0.914914 487 12 0.850473 471 15 0.933198 285 16 0.8445743 276 16 0.941183 286 15 0.908663 489 16 0.870232 278 12 0.8024952 440 16 0.9526862 93 12 0.8142406 332 16 0.8330727 280 10 0.875322 210 11 0.723189 222 15 0.935161 474 15 0.9206301 435 11 0.925752 233 14 0.672024 124 11 0.866583 370 15 0.859613 230 15 0.801948 52 7 0.8807437 445 15 0.7203794 199 14 0.805146 181 15 0.838346 364 15 0.9052425 508 15 0.890123 388 15 0.916036 508 13 0.0155650 588 16 0.0235660 433 15 0.0030864 455 9 0.000000 147 12 0.034204 348 15 0.0183478 601 15 0.582798 343 14 0.7302375 424 15 0.6833382 288 15 0.6583469 314 15 0.720725 274 15 0.8777803 0.774328 0.8260259 0.865652 0.8865688 0.885157 0.860099 0.9352576 0.8305666 0.9314128 0.8985030 0.858250 0.8113599 0.945431 0.8494424 0.8531145 0.841432 0.706484 0.9331125 0.9156927 0.915070 0.690388 0.922731 0.8626129 0.8582332 0.8887827 0.744771 0.780576 0.791522 0.8995610 0.8952645 0.9187934 0.0110578 0.02552936 0.01593968 0.00078881 0.047208 0.0240111 0.5608569 0.694212 0.6452763 0.6150285 0.7101465 9 0.873273 0.8790659 0.00143282 15 0.8712959 0.8667961 0.00449982 0.2517654 7.7102e-01 insignificant 1.00000 1.0000e+00 insignificant 0.0854413 9.4310e-01 insignificant 1.00000 1.0000e+00 insignificant 0.03049435 0.2630757 insignificant 1.00000 insignificant 0.873273 0.0155521 8.5653e-01 15 0.8712959 0.0195035 0.85179241 2.1692e-228 1.0000e+00 hypermethylated 2.1692e-225 1.0000e+00 hypermethylated 2.2596e-38 1.0000e+00 hypermethylated 2.2596e-35 1.0000e+00 hypermethylated 0.85486088 1.1905e-26 hypermethylated 1.1905e-23 hypermethylated 0.874342 0.6579428 0.21220855 15 0.8772456 0.6646321 0.2126135 4.7353e-39 1.0000e+00 hypermethylated 2.3676e-36 1.0000e+00 hypermethylated 1.5561e-16 1.0000e+00 hypermethylated 3.8904e-14 1.0000e+00 hypermethylated 0.19556675 4.8467e-04 weaklyHypermeth 2.8510e-02 weaklyHypermeth 0.8790659 0.0155521 0.8611572 15 0.8667961 0.0195035 0.8472926 5.9655e-152 1.0000e+00 hypermethylated 5.9655e-149 1.0000e+00 hypermethylated 3.2205e-31 1.0000e+00 hypermethylated 3.2205e-28 1.0000e+00 hypermethylated 0.82436653 1.2983e-13 hypermethylated 4.3278e-11 hypermethylated 0.8792622 0.6579428 0.21195009 15 0.8684422 0.6646321 0.20381010 2.7462e-22 1.0000e+00 hypermethylated 6.8654e-20 1.0000e+00 hypermethylated 6.8821e-11 1.0000e+00 hypermethylated 1.7205e-08 1.0000000 hypermethylated 1.6507e-01 7.8022e-04 weaklyHypermeth 0.07802187 weaklyHypermeth 0.0153121 0.6579428 -0.6436683 15 0.0181371 0.6646321 -0.6464950 1.0000e+00 1.9339e-68 hypomethylated 1.0000e+00 1.9339e-65 hypomethylated 1.0000e+00 3.4619e-20 hypomethylated 1.0000e+00 3.4619e-17 hypomethylated -0.6592941 8.6175e-06 hypomethylated 5.3859e-04 hypomethylated chr16 83900050 83901050 49403 TMEM148 ENSG00000179219 0.768020 123 5 0.448501 131 5 0.807744 83 5 0.844586 98 5 0.7684495 80 5 0.829768 299 9 0.507143 35 5 0.922932 112 5 0.4730655 79 5 0.659420 36 1 0.677422 287 5 0.896296 41 2 0.5719312 127 5 0.7209596 49 4 0.6110000 50 4 0.1944444 23 1 0.964286 15 1 0.631185 146 5 0.748055 286 5 0.6833929 123 5 0.455808 68 5 0.718781 48 5 0.852020 87 5 0.741548 33 3 0.688333 60 5 0.8755918 169 5 0.8532179 127 5 0.930556 42 4 0.491449 252 5 0.8771255 212 6 0.862624 189 9 0.871800 222 9 0.8262945 175 5 0.9690908 168 5 0.7377778 224 4 1.000000 8 0 0.660400 152 5 0.6736936 368 5 0.536871 156 5 0.5604329 173 5 0.4184140 111 4 0.3529412 68 4 0.471332 74 4 0.4824561 0.558243 0.8478788 0.702316 0.7735600 0.864203 0.603008 0.8603842 0.7914474 0.8474447 0.7992672 1.000000 0.7584937 0.735822 0.7405867 NA 0.842703 0.601443 0.7969130 0.8093356 0.813317 0.436138 0.855801 0.6340602 0.7819298 0.8469472 0.748859 0.894737 0.883241 0.7728615 0.7861942 0.8150137 0.6581721 0.96798495 0.85883510 0.89223497 0.632429 0.3806985 0.1581879 0.478177 0.3244624 0.1783282 0.2682473 1 0.753936 0.8079734 -0.05397022 5 0.6494261 0.7428140 -0.09338798 0.9999873 1.4693e-02 weaklyHypometh 1.00000 3.1458e-01 insignificant 0.9997677 7.1351e-02 insignificant 1.00000 9.2663e-01 insignificant -0.08180766 0.1928455 lowCoverage 1.00000 lowCoverage 0.753936 0.7193784 3.3107e-02 5 0.6494261 0.7198623 -0.07043624 5.7870e-01 1.1335e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9467e-01 2.6944e-02 inconclusive 1.0000e+00 6.2660e-01 insignificant -0.12477932 1.1691e-01 lowCoverage 5.1839e-01 lowCoverage 0.754106 0.3024055 0.45152140 5 0.7159493 0.6227976 0.0931517 9.1770e-17 1.2105e-01 hypermethylated 8.3427e-15 9.6071e-01 hypermethylated 8.0556e-07 1.7768e-01 hypermethylated 4.3715e-05 1.0000e+00 hypermethylated 0.21843193 1.5271e-03 lowCoverage 5.5242e-02 lowCoverage 0.8074369 0.7196347 0.0754199 5 0.6752855 0.7453294 -0.0700439 2.8849e-01 9.5504e-01 insignificant 9.0435e-01 1.0000e+00 insignificant 9.8345e-01 4.4985e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04297166 5.7838e-01 lowCoverage 1.0000e+00 lowCoverage 0.8072207 0.3024055 0.49860256 5 0.8208787 0.6227976 0.19808108 3.7250e-16 7.4100e-01 hypermethylated 6.2084e-14 1.0000e+00 hypermethylated 1.1176e-06 5.8500e-01 hypermethylated 9.3135e-05 1.0000000 hypermethylated 3.0024e-01 1.8582e-04 lowCoverage 0.02654629 lowCoverage 0.7191529 0.3024055 0.4174497 5 0.7331612 0.6227976 0.1103636 1.7839e-04 8.7157e-01 hypermethylated 5.9463e-03 1.0000e+00 hypermethylated 2.6683e-03 9.3379e-01 weaklyHypermeth 1.2706e-01 1.0000e+00 insignificant 0.3432112 1.2203e-03 lowCoverage 1.7925e-02 lowCoverage chr16 83919050 83920050 49406 ENSG00000220991 0.000000 246 6 0.014426 211 6 0.004902 231 6 0.000000 115 6 0.0072464 124 6 0.011263 317 6 0.000000 240 6 0.023810 197 6 0.0036232 277 6 0.009623 231 6 0.010000 249 6 0.000000 262 6 0.0064103 210 6 NA 0 0 0.0084728 232 6 0.0087302 231 6 0.000000 294 6 0.085577 130 6 0.000000 177 6 0.0075397 319 6 0.000000 66 4 0.022398 94 6 0.025619 224 6 0.012821 108 6 0.000000 32 2 0.0128205 283 6 0.0166667 102 6 0.023810 65 6 0.000000 126 6 0.0033333 268 6 0.000000 194 6 0.003876 382 6 0.6362734 100 6 0.5558951 150 6 1.0000000 13 2 0.153439 119 6 0.806939 62 6 0.3373559 146 6 0.022888 236 6 0.0463320 282 6 0.0123951 224 6 0.0234180 354 6 0.089166 162 6 0.0000000 0.013154 0.0045791 0.000000 0.0078105 0.010008 0.000000 0.0205304 0.0033845 0.0089268 0.0098204 0.000000 0.0052971 NA 0.0081343 0.0084117 0.000000 0.077693 0.0000000 0.0069932 0.000000 0.019869 0.026704 0.0119760 0.0000000 0.0105942 0.015569 0.021814 0.000000 0.0035928 0.0000000 0.0036207 0.6240328 0.52909958 0.60341699 0.13610873 0.800570 0.3262872 0.0203954 0.042403 0.0111539 0.0221984 0.0817001 6 0.007687 0.0087449 -0.00117552 6 0.0084478 0.0095886 -0.00114086 0.8171445 2.9538e-01 insignificant 1.00000 1.0000e+00 insignificant 0.4691108 5.5504e-01 insignificant 1.00000 1.0000e+00 insignificant 0.00049973 0.9252950 insignificant 1.00000 insignificant 0.007687 0.4661017 -4.5742e-01 6 0.0084478 0.4656737 -0.45722589 1.0000e+00 8.1267e-36 hypomethylated 1.0000e+00 1.6253e-33 hypomethylated 1.0000e+00 1.2841e-17 hypomethylated 1.0000e+00 4.2804e-15 hypomethylated -0.57103879 6.0897e-03 weaklyHypometh 4.7207e-02 weaklyHypometh 0.007687 0.0270270 -0.02254192 6 0.0084478 0.0355372 -0.0270894 9.9999e-01 1.4132e-06 weaklyHypometh 1.0000e+00 2.8263e-04 weaklyHypometh 1.0000e+00 4.7393e-06 weaklyHypometh 1.0000e+00 1.1848e-03 weaklyHypometh -0.02822808 1.0968e-01 insignificant 7.8108e-01 insignificant 0.0087449 0.4661017 -0.4559908 6 0.0095886 0.4656737 -0.4560850 1.0000e+00 2.5421e-23 hypomethylated 1.0000e+00 5.0842e-21 hypomethylated 1.0000e+00 1.1327e-13 hypomethylated 1.0000e+00 3.7755e-11 hypomethylated -0.57153852 6.0792e-03 weaklyHypometh 4.9298e-02 weaklyHypometh 0.0087449 0.0270270 -0.02273871 6 0.0095886 0.0355372 -0.02594859 9.9410e-01 1.3985e-05 weaklyHypometh 1.0000e+00 2.7970e-03 weaklyHypometh 9.9983e-01 1.8921e-05 weaklyHypometh 1.0000e+00 0.0094606 weaklyHypometh -2.8728e-02 1.0457e-01 insignificant 0.82240727 insignificant 0.4661017 0.0270270 0.4291718 6 0.4656737 0.0355372 0.4301364 7.3454e-10 1.0000e+00 hypermethylated 7.3454e-08 1.0000e+00 hypermethylated 6.8853e-07 1.0000e+00 hypermethylated 1.7213e-04 1.0000e+00 hypermethylated 0.5428107 7.3162e-03 weaklyHypermeth 5.9481e-02 weaklyHypermeth chr16 83925950 83926950 49408 ENSG00000220991 0.249382 923 18 0.220593 662 19 0.266720 653 19 0.231113 820 17 0.2551936 485 19 0.276811 1100 19 0.273132 625 17 0.264338 731 19 0.2701389 872 19 0.213485 835 19 0.320442 635 19 0.272117 536 19 0.1618308 787 19 0.2513044 523 13 0.1995541 674 19 0.2006952 442 17 0.223185 319 14 0.310863 970 18 0.208111 555 16 0.1912190 937 19 0.313211 248 16 0.160193 400 16 0.215297 497 19 0.273149 453 17 0.237648 270 17 0.1584715 899 19 0.2359822 374 18 0.270350 446 15 0.255468 610 19 0.1650126 944 19 0.197946 847 19 0.353035 991 19 0.8300737 434 19 0.7704328 395 17 0.8648249 624 19 0.469253 115 10 0.862368 407 19 0.6543187 669 19 0.244011 964 18 0.3142144 782 18 0.2160456 950 18 0.2661670 1102 17 0.225113 559 18 0.1856418 0.147270 0.2051486 0.142832 0.1260648 0.195825 0.211303 0.1516085 0.1474049 0.1515315 0.1865006 0.233415 0.0813701 0.178273 0.1120663 0.1157316 0.188933 0.227081 0.1214345 0.1281091 0.290173 0.102211 0.195181 0.1784522 0.1523450 0.1383541 0.176910 0.169954 0.169907 0.1133865 0.0866527 0.2494322 0.7448408 0.73277076 0.90638624 0.48646466 0.872594 0.5042394 0.1001755 0.194057 0.1418476 0.1578034 0.1432840 15 0.182051 0.1709414 0.00993384 19 0.2381320 0.2455340 -0.00740197 0.2371023 9.9982e-01 insignificant 1.00000 1.0000e+00 insignificant 0.3541619 9.9151e-01 insignificant 1.00000 1.0000e+00 insignificant 0.00669789 0.7405019 insignificant 1.00000 insignificant 0.182044 0.7689107 -5.4174e-01 19 0.2271472 0.7384729 -0.51132566 1.0000e+00 1.5999e-139 hypomethylated 1.0000e+00 1.5999e-136 hypomethylated 1.0000e+00 2.3372e-34 hypomethylated 1.0000e+00 2.3372e-31 hypomethylated -0.49886715 4.5978e-04 hypomethylated 5.4092e-03 hypomethylated 0.181915 0.1335782 0.00900305 18 0.2309247 0.2253799 0.0055447 7.7819e-01 3.8106e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.9739e-01 2.6351e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01009876 6.2651e-01 insignificant 1.0000e+00 insignificant 0.1708961 0.7689107 -0.5593861 19 0.2354033 0.7384729 -0.5030696 1.0000e+00 2.0096e-103 hypomethylated 1.0000e+00 2.0096e-100 hypomethylated 1.0000e+00 6.2554e-30 hypomethylated 1.0000e+00 6.2554e-27 hypomethylated -0.50556503 2.9897e-04 hypomethylated 3.9338e-03 hypomethylated 0.1710187 0.1335782 0.00221132 18 0.2550202 0.2253799 0.02964027 8.8819e-01 1.9925e-02 inconclusive 1.0000e+00 5.2434e-01 insignificant 8.5437e-01 3.8678e-02 inconclusive 1.0000e+00 0.9917330 insignificant -1.6797e-02 5.1288e-01 insignificant 1.00000000 insignificant 0.7711575 0.1335782 0.5680205 18 0.7948040 0.2253799 0.5694240 1.1596e-45 1.0000e+00 hypermethylated 1.1596e-42 1.0000e+00 hypermethylated 6.1919e-15 1.0000e+00 hypermethylated 6.1919e-12 1.0000e+00 hypermethylated 0.4887684 3.6859e-04 hypermethylated 8.5514e-03 hypermethylated chr16 83950850 83951850 49412 ENSG00000220991 0.885222 188 8 0.839648 209 5 0.822817 219 5 0.966427 130 5 0.8516523 104 3 0.741292 294 8 0.777708 150 7 0.822775 229 8 0.9307989 158 7 0.915758 175 8 0.897959 290 8 0.883391 66 5 0.7711920 217 8 0.8100529 88 3 0.9021803 180 8 0.9579487 46 2 0.765306 39 4 0.699869 148 4 0.662163 239 8 0.8192460 191 8 0.866744 94 6 0.825509 92 5 0.872116 151 8 0.816266 93 6 0.841615 113 5 0.7469939 271 7 0.6984302 149 9 0.733173 93 5 0.869297 212 8 0.8201838 320 8 0.861903 258 8 0.792003 211 8 0.8085470 160 8 0.8587954 151 8 0.8333333 158 2 0.872727 56 5 0.681836 132 7 0.8796393 251 8 0.604168 128 8 0.8600042 133 8 0.6847222 168 5 0.6330112 116 5 0.833219 118 8 0.8792331 0.854654 0.7500142 0.906492 0.9344597 0.902180 0.846474 0.8696472 0.8681277 0.9101001 0.8905551 0.931041 0.8847429 0.865283 0.9009555 0.8911309 0.924580 0.664370 0.9144317 0.9516901 0.973230 0.661150 0.929378 0.8838447 0.8562883 0.9194482 0.910686 0.880381 0.863670 0.9110954 0.8803308 0.9147650 0.8061039 0.89662064 0.98332705 0.50243506 0.811946 0.7324236 0.4383299 0.640262 0.7147197 0.6309319 0.6346590 2 0.866170 0.8794361 -0.02100242 8 0.7242229 0.6285455 0.09567746 0.9881820 7.3920e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9792944 8.0611e-01 insignificant 1.00000 1.0000e+00 insignificant 0.02415080 0.3437424 insignificant 1.00000 insignificant 0.867045 0.8105727 5.4055e-02 8 0.7932146 0.7621251 0.03108951 4.3812e-02 5.5967e-01 weaklyHypermeth 1.6167e-01 1.0000e+00 insignificant 5.1863e-01 6.8006e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01369056 7.0784e-01 insignificant 1.0000e+00 insignificant 0.866786 0.6907994 0.20135113 5 0.7365564 0.6397091 0.0968473 1.3209e-07 9.9497e-01 hypermethylated 3.4760e-06 1.0000e+00 hypermethylated 4.8645e-03 9.6959e-01 weaklyHypermeth 7.4839e-02 1.0000e+00 weaklyHypermeth 0.11314551 9.6193e-02 insignificant 7.3722e-01 insignificant 0.8828125 0.8105727 0.0794688 8 0.8027133 0.7621251 0.0405882 9.7323e-02 7.5912e-01 insignificant 3.4512e-01 1.0000e+00 insignificant 6.7150e-01 9.3409e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01046024 7.6915e-01 insignificant 1.0000e+00 insignificant 0.8823816 0.6907994 0.21561975 5 0.7453766 0.6397091 0.10566757 2.4525e-06 9.9759e-01 hypermethylated 5.9817e-05 1.0000e+00 hypermethylated 3.3791e-03 9.9843e-01 weaklyHypermeth 5.9282e-02 1.0000000 weaklyHypermeth 8.8995e-02 1.6763e-01 insignificant 1.00000000 insignificant 0.8105727 0.6928896 0.1634260 5 0.7621251 0.6889174 0.0732076 2.1221e-02 9.8366e-01 weaklyHypermeth 4.1609e-01 1.0000e+00 insignificant 2.2871e-01 9.9909e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0994550 1.4623e-01 insignificant 5.8729e-01 insignificant chr16 83952650 83953650 49413 ENSG00000220991 0.894800 566 9 0.852821 305 9 0.758799 268 9 0.896187 504 9 0.8597945 130 9 0.920894 638 9 0.806425 270 9 0.896063 286 9 0.8441753 327 9 0.904579 283 9 0.903189 412 9 0.865647 198 8 0.8918691 384 9 0.8444055 158 5 0.7974797 276 9 0.9278348 165 7 0.876545 45 5 0.866602 665 9 0.862457 287 9 0.8986080 484 9 0.891172 167 9 0.810110 225 8 0.916567 323 9 0.781390 130 9 0.885500 194 9 0.9026365 431 9 0.8267470 233 9 0.924597 214 8 0.859349 297 9 0.8945169 418 9 0.894036 339 9 0.925021 569 9 0.7792465 281 9 0.8614945 235 9 0.7463235 211 7 0.939251 101 7 0.844281 317 9 0.8165701 396 9 0.843533 483 9 0.8663854 460 9 0.8181922 465 9 0.7349946 577 9 0.875417 566 9 0.8798063 0.839169 0.7291741 0.903817 0.8415486 0.914170 0.824239 0.8830507 0.8469736 0.8877172 0.8919537 0.849375 0.8838751 0.878574 0.8459686 0.9086172 0.914646 0.870470 0.8595559 0.8853957 0.866684 0.798534 0.910807 0.7497734 0.8606994 0.8921911 0.823632 0.922984 0.836147 0.8849039 0.8870622 0.9206543 0.8130256 0.91338510 0.66555884 0.91765085 0.885256 0.7752334 0.8399114 0.851626 0.8123324 0.7454059 0.8700449 8 0.876072 0.8844633 -0.00631569 9 0.8885013 0.8958765 -0.00737512 0.9637909 4.6947e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9386842 6.2668e-01 insignificant 1.00000 1.0000e+00 insignificant -0.00751141 0.6548795 insignificant 1.00000 insignificant 0.876053 0.8157041 6.0028e-02 9 0.8761126 0.8203062 0.05580643 1.1722e-03 3.6761e-01 weaklyHypermeth 5.5817e-03 1.0000e+00 weaklyHypermeth 4.2948e-01 7.4022e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03726445 2.4775e-01 insignificant 8.9991e-01 insignificant 0.876053 0.8228146 0.05654932 9 0.8761126 0.8227201 0.0533925 8.5502e-05 9.9941e-01 weaklyHypermeth 1.3154e-03 1.0000e+00 weaklyHypermeth 2.7989e-03 9.9991e-01 weaklyHypermeth 4.8460e-02 1.0000e+00 weaklyHypermeth 0.04075451 1.8877e-01 insignificant 1.0000e+00 insignificant 0.8844306 0.8157041 0.0656929 9 0.8843072 0.8203062 0.0640010 6.6895e-03 5.4635e-01 weaklyHypermeth 2.8834e-02 1.0000e+00 weaklyHypermeth 3.3178e-01 7.0793e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 0.04477586 1.8593e-01 insignificant 6.9119e-01 insignificant 0.8844306 0.8228146 0.06321472 9 0.8843072 0.8227201 0.06158704 4.5626e-05 9.9951e-01 weaklyHypermeth 8.0046e-04 1.0000e+00 weaklyHypermeth 2.6032e-03 9.9985e-01 weaklyHypermeth 4.9118e-02 1.0000000 weaklyHypermeth 4.8266e-02 1.3911e-01 insignificant 0.98657567 insignificant 0.8157041 0.8228146 -0.0049462 9 0.8203062 0.8227201 -0.0024140 8.6545e-03 7.6896e-01 inconclusive 1.8814e-01 1.0000e+00 insignificant 9.5759e-03 8.9259e-01 inconclusive 2.8547e-01 1.0000e+00 insignificant 0.0034901 9.2768e-01 insignificant 1.0000e+00 insignificant chr16 83986150 83987150 49418 ENSG00000220991 0.770655 68 8 0.448057 111 8 0.267891 193 9 0.599495 68 7 0.5149334 143 9 0.739358 123 8 0.590726 174 9 0.463955 188 9 0.4059686 139 9 0.595064 218 9 0.658421 185 9 0.594457 84 9 0.2889370 213 9 0.6257457 114 7 0.5387002 172 9 0.4613757 62 6 0.376538 62 4 0.495130 68 7 0.380922 182 9 0.4707584 133 7 0.692196 70 8 0.318040 148 7 0.649013 81 9 0.487115 79 7 0.531602 61 7 0.5627942 150 9 0.5225672 270 8 0.447111 117 8 0.650905 129 9 0.4262063 202 9 0.403177 154 9 0.648466 108 8 0.0058480 170 9 0.0041152 127 9 0.0625000 122 5 0.025000 25 1 0.047938 192 8 0.0326852 168 9 0.477293 81 7 0.6081129 65 9 0.4923611 62 7 0.3042328 49 5 0.342593 51 6 0.7722893 0.408868 0.3052394 0.538292 0.4645023 0.760034 0.555463 0.3816214 0.3685216 0.5631117 0.6739092 0.595696 0.2641541 0.623108 0.5300004 0.4801294 0.316328 0.468135 0.3731261 0.4899744 0.729167 0.324650 0.614427 0.4687600 0.5450680 0.5233905 0.528119 0.445442 0.626754 0.3717031 0.3371497 0.6771098 0.0002580 0.00018155 0.07356572 0.02972480 0.034758 0.0333905 0.4623063 0.581396 0.5429466 0.2694911 0.3447712 5 0.492222 0.5079669 -0.02566252 9 0.4998487 0.5365729 -0.03672419 0.9265804 1.0624e-01 insignificant 1.00000 8.4994e-01 insignificant 0.8467885 3.3311e-01 insignificant 1.00000 1.0000e+00 insignificant -0.01391168 0.7615468 insignificant 1.00000 insignificant 0.492222 0.0248756 4.6081e-01 9 0.4998487 0.0266195 0.47322919 4.7113e-40 1.0000e+00 hypermethylated 1.2733e-38 1.0000e+00 hypermethylated 1.2476e-21 1.0000e+00 hypermethylated 1.3862e-19 1.0000e+00 hypermethylated 0.48467323 3.1628e-13 hypermethylated 3.5142e-11 hypermethylated 0.492222 0.4545455 0.03458220 8 0.4998487 0.4769209 0.0229278 6.1502e-02 5.9278e-01 insignificant 4.6242e-01 1.0000e+00 insignificant 2.7754e-02 9.1448e-01 weaklyHypermeth 2.8613e-01 1.0000e+00 insignificant 0.06943576 3.0611e-01 insignificant 1.0000e+00 insignificant 0.5079669 0.0248756 0.4801629 9 0.5365729 0.0266195 0.5099534 1.3019e-40 1.0000e+00 hypermethylated 6.5095e-39 1.0000e+00 hypermethylated 4.3125e-18 1.0000e+00 hypermethylated 4.7917e-16 1.0000e+00 hypermethylated 0.49858491 3.9212e-09 hypermethylated 2.6141e-07 hypermethylated 0.5079669 0.4545455 0.06050257 8 0.5365729 0.4769209 0.05965203 1.0815e-02 7.8684e-01 weaklyHypermeth 9.7430e-02 1.0000e+00 weaklyHypermeth 1.0540e-02 8.9491e-01 weaklyHypermeth 1.4003e-01 1.0000000 insignificant 8.3347e-02 2.3559e-01 insignificant 1.00000000 insignificant 0.0248756 0.4545455 -0.4254586 8 0.0266195 0.4769209 -0.4503013 1.0000e+00 2.9159e-24 hypomethylated 1.0000e+00 2.0828e-22 hypomethylated 1.0000e+00 5.3790e-11 hypomethylated 1.0000e+00 4.4825e-09 hypomethylated -0.4152375 1.3714e-03 weaklyHypometh 1.8786e-02 weaklyHypometh chr16 83986250 83987250 49419 ENSG00000220991 0.770655 68 8 0.448057 111 8 0.267891 193 9 0.599495 68 7 0.5149334 143 9 0.739358 123 8 0.590726 174 9 0.463955 188 9 0.4059686 139 9 0.595064 218 9 0.658421 185 9 0.594457 84 9 0.2889370 213 9 0.6257457 114 7 0.5387002 172 9 0.4613757 62 6 0.376538 62 4 0.495130 68 7 0.380922 182 9 0.4707584 133 7 0.692196 70 8 0.318040 148 7 0.649013 81 9 0.487115 79 7 0.531602 61 7 0.5627942 150 9 0.5225672 270 8 0.447111 117 8 0.650905 129 9 0.4262063 202 9 0.403177 154 9 0.648466 108 8 0.0058480 170 9 0.0041152 127 9 0.0625000 122 5 0.025000 25 1 0.047938 192 8 0.0326852 168 9 0.477293 81 7 0.6081129 65 9 0.4923611 62 7 0.3042328 49 5 0.342593 51 6 0.7722893 0.408868 0.3052394 0.538292 0.4645023 0.760034 0.555463 0.3816214 0.3685216 0.5631117 0.6739092 0.595696 0.2641541 0.623108 0.5300004 0.4801294 0.316328 0.468135 0.3731261 0.4899744 0.729167 0.324650 0.614427 0.4687600 0.5450680 0.5233905 0.528119 0.445442 0.626754 0.3717031 0.3371497 0.6771098 0.0002580 0.00018155 0.07356572 0.02972480 0.034758 0.0333905 0.4623063 0.581396 0.5429466 0.2694911 0.3447712 5 0.492222 0.5079669 -0.02566252 9 0.4998487 0.5365729 -0.03672419 0.9265804 1.0624e-01 insignificant 1.00000 8.4994e-01 insignificant 0.8467885 3.3311e-01 insignificant 1.00000 1.0000e+00 insignificant -0.01391168 0.7615468 insignificant 1.00000 insignificant 0.492222 0.0248756 4.6081e-01 9 0.4998487 0.0266195 0.47322919 4.7113e-40 1.0000e+00 hypermethylated 1.2733e-38 1.0000e+00 hypermethylated 1.2476e-21 1.0000e+00 hypermethylated 1.3862e-19 1.0000e+00 hypermethylated 0.48467323 3.1628e-13 hypermethylated 3.5142e-11 hypermethylated 0.492222 0.4545455 0.03458220 8 0.4998487 0.4769209 0.0229278 6.1502e-02 5.9278e-01 insignificant 4.6242e-01 1.0000e+00 insignificant 2.7754e-02 9.1448e-01 weaklyHypermeth 2.8613e-01 1.0000e+00 insignificant 0.06943576 3.0611e-01 insignificant 1.0000e+00 insignificant 0.5079669 0.0248756 0.4801629 9 0.5365729 0.0266195 0.5099534 1.3019e-40 1.0000e+00 hypermethylated 6.5095e-39 1.0000e+00 hypermethylated 4.3125e-18 1.0000e+00 hypermethylated 4.7917e-16 1.0000e+00 hypermethylated 0.49858491 3.9212e-09 hypermethylated 2.6141e-07 hypermethylated 0.5079669 0.4545455 0.06050257 8 0.5365729 0.4769209 0.05965203 1.0815e-02 7.8684e-01 weaklyHypermeth 9.7430e-02 1.0000e+00 weaklyHypermeth 1.0540e-02 8.9491e-01 weaklyHypermeth 1.4003e-01 1.0000000 insignificant 8.3347e-02 2.3559e-01 insignificant 1.00000000 insignificant 0.0248756 0.4545455 -0.4254586 8 0.0266195 0.4769209 -0.4503013 1.0000e+00 2.9159e-24 hypomethylated 1.0000e+00 2.0828e-22 hypomethylated 1.0000e+00 5.3790e-11 hypomethylated 1.0000e+00 4.4825e-09 hypomethylated -0.4152375 1.3714e-03 weaklyHypometh 1.8786e-02 weaklyHypometh chr16 83993150 83994150 49420 ENSG00000220991 0.756157 994 16 0.649947 570 17 0.675796 480 17 0.774550 1056 16 0.6423568 329 15 0.782733 878 18 0.634209 525 17 0.735354 563 18 0.7173615 573 16 0.704636 613 17 0.787833 753 18 0.762217 381 14 0.7759703 580 16 0.6946212 439 11 0.7332617 560 15 0.6289683 191 9 0.887882 113 7 0.571338 1276 17 0.679195 643 17 0.7042378 706 16 0.685069 256 13 0.816531 500 14 0.795751 577 18 0.749917 242 17 0.801995 729 15 0.7614543 748 18 0.7197415 459 13 0.628835 227 15 0.728507 773 16 0.6837354 820 17 0.781871 744 17 0.792024 775 18 0.6908425 623 17 0.7189658 612 17 0.7216094 470 12 0.732532 273 15 0.525731 509 17 0.7207760 827 18 0.786201 817 17 0.7514043 787 17 0.7471260 1103 16 0.7474419 817 13 0.788513 859 18 0.8418511 0.761419 0.7708801 0.867514 0.8224636 0.846910 0.833106 0.8402174 0.8184888 0.8757037 0.8476833 0.840033 0.8630213 0.837879 0.8413925 0.8030732 0.824406 0.831948 0.8393886 0.8521761 0.816435 0.833651 0.862856 0.8945285 0.8963246 0.8677019 0.842145 0.726676 0.865370 0.8532540 0.8647741 0.8792050 0.8186500 0.79028130 0.81716115 0.83030735 0.804937 0.8071547 0.8807002 0.879063 0.8499148 0.7964797 0.8869712 11 0.810561 0.8067153 -0.02252219 17 0.6294796 0.7089418 -0.07946220 0.9913048 1.7202e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9956745 5.8790e-02 insignificant 1.00000 9.1315e-01 insignificant -0.03052139 0.1991615 insignificant 1.00000 insignificant 0.810627 0.7288647 2.0271e-02 17 0.6398962 0.6230632 0.01683307 1.2913e-03 2.0485e-01 weaklyHypermeth 6.0908e-03 1.0000e+00 weaklyHypermeth 3.3062e-01 3.6416e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02985515 4.3415e-01 insignificant 1.0000e+00 insignificant 0.810749 0.8146965 -0.01714322 18 0.6519449 0.7851558 -0.1332109 9.8055e-01 3.0786e-02 weaklyHypometh 1.0000e+00 4.3980e-01 insignificant 9.9938e-01 2.4579e-02 weaklyHypometh 1.0000e+00 5.1205e-01 insignificant -0.04920602 1.5534e-02 weaklyHypometh 2.6183e-01 insignificant 0.8068331 0.7291415 0.0411733 17 0.7397653 0.6284137 0.1113516 4.7848e-02 4.6704e-01 weaklyHypermeth 1.7854e-01 1.0000e+00 insignificant 4.2405e-01 7.1931e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.06037655 1.3697e-01 insignificant 5.5257e-01 insignificant 0.8068381 0.8146542 0.00705562 17 0.7507301 0.7744136 -0.02368345 9.0921e-01 6.2967e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.5916e-01 7.9146e-01 insignificant 1.0000e+00 1.0000000 insignificant -1.8685e-02 3.4520e-01 insignificant 1.00000000 insignificant 0.7274390 0.8146965 -0.0373699 17 0.6882627 0.7851558 -0.0968931 9.1461e-01 1.9638e-01 insignificant 1.0000e+00 7.0136e-01 insignificant 9.7710e-01 4.5371e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0790612 5.8692e-02 insignificant 2.9945e-01 insignificant chr16 84012550 84013550 49421 ENSG00000220991 0.694415 475 18 0.456532 377 16 0.617018 328 13 0.523172 599 17 0.5471730 216 12 0.726803 736 19 0.517466 281 15 0.601435 394 16 0.5552619 381 16 0.554492 433 17 0.532869 496 18 0.532217 196 13 0.3776741 435 16 0.5304176 259 13 0.4907374 348 16 0.4227244 140 9 0.475379 73 6 0.594337 610 17 0.425268 332 16 0.4027598 574 19 0.641490 228 16 0.344713 325 17 0.506475 347 18 0.447151 238 16 0.670412 237 16 0.6323456 498 17 0.5012905 409 16 0.505740 235 15 0.496324 352 18 0.5509921 584 18 0.449261 473 17 0.674992 560 19 0.6539886 370 18 0.7232167 374 15 0.7825154 393 6 0.338466 75 4 0.629475 326 16 0.5861275 550 19 0.330880 561 16 0.5493780 594 17 0.4334089 719 18 0.3958744 361 15 0.391044 531 16 0.6186119 0.498340 0.5917555 0.510476 0.5595694 0.709127 0.519303 0.5575157 0.4296632 0.5615937 0.5676567 0.486478 0.2751656 0.495673 0.4534633 0.4362220 0.498559 0.538166 0.3574474 0.3044839 0.614939 0.225110 0.513786 0.4613936 0.6642867 0.5572824 0.454211 0.514938 0.375603 0.4250068 0.3734679 0.6499662 0.5955665 0.64475319 0.72120305 0.39637220 0.712811 0.4611875 0.2501588 0.460525 0.3549795 0.3617792 0.3194127 11 0.557985 0.5498773 0.02065399 18 0.5532790 0.5567230 -0.00344398 0.3032433 6.0037e-01 insignificant 1.00000 1.0000e+00 insignificant 0.7348486 7.3797e-01 insignificant 1.00000 1.0000e+00 insignificant -0.00619142 0.8641945 insignificant 1.00000 insignificant 0.558421 0.6484674 -5.9652e-02 18 0.5784281 0.5544697 0.02395832 5.7279e-01 7.5689e-06 weaklyHypometh 1.0000e+00 3.0275e-04 weaklyHypometh 9.1127e-01 1.2040e-05 weaklyHypometh 1.0000e+00 7.5251e-04 weaklyHypometh -0.09005726 2.2134e-01 insignificant 8.3843e-01 insignificant 0.557888 0.3435805 0.14144049 17 0.5425209 0.4125570 0.1299639 4.8958e-11 9.9761e-01 weaklyHypermeth 2.4479e-09 1.0000e+00 weaklyHypermeth 1.5263e-07 9.9836e-01 weaklyHypermeth 1.0175e-05 1.0000e+00 weaklyHypermeth 0.10879044 3.5557e-02 weaklyHypermeth 4.2840e-01 insignificant 0.5505593 0.6484674 -0.0816323 19 0.5696319 0.5544697 0.0151621 9.5062e-01 2.3823e-05 weaklyHypometh 1.0000e+00 1.4014e-03 weaklyHypometh 9.7041e-01 1.5054e-03 weaklyHypometh 1.0000e+00 7.9233e-02 weaklyHypometh -0.08386584 2.6508e-01 insignificant 9.2364e-01 insignificant 0.5490942 0.3434563 0.12323536 17 0.5185878 0.3929114 0.12567639 4.2090e-07 9.9398e-01 weaklyHypermeth 1.2026e-05 1.0000e+00 weaklyHypermeth 6.9458e-06 9.9991e-01 weaklyHypermeth 3.8588e-04 1.0000000 weaklyHypermeth 1.1498e-01 3.4714e-02 weaklyHypermeth 0.47016804 insignificant 0.6494005 0.3437048 0.2076231 17 0.6420176 0.4342705 0.2077471 3.6328e-13 9.9997e-01 hypermethylated 9.0819e-11 1.0000e+00 hypermethylated 4.6782e-08 9.9963e-01 hypermethylated 1.5594e-05 1.0000e+00 hypermethylated 0.1988477 2.6116e-02 weaklyHypermeth 1.6065e-01 insignificant chr16 84052550 84053550 49424 ENSG00000220991 0.040088 318 4 0.088121 136 5 0.101940 162 4 0.021108 288 5 0.0064516 78 5 0.040145 244 4 0.029759 147 5 0.066667 115 4 0.0259701 174 4 0.017714 157 4 0.041955 161 5 0.057181 123 4 0.2066667 129 4 0.0000000 14 1 0.0387147 136 4 0.0724074 110 4 0.019841 139 4 0.033139 243 4 0.034812 90 4 0.0146570 204 4 0.037500 50 5 0.000000 157 4 0.052020 143 5 0.099074 86 5 0.034646 176 5 0.0047619 232 5 0.0039683 111 4 0.000000 36 2 0.179605 104 4 0.0309244 213 5 0.043636 197 5 0.096347 267 4 0.0000000 58 5 0.1443254 170 4 0.0000000 183 4 0.053571 73 4 0.151904 62 4 0.0180077 139 5 0.006117 365 4 0.0090000 292 5 0.0015038 338 4 0.0000000 308 4 0.027102 285 4 0.0536242 0.045888 0.0693825 0.028062 0.0149138 0.046078 0.013248 0.0000000 0.0346913 0.0280077 0.0389979 0.082347 0.0054795 0.020010 0.0561821 0.0929890 0.019667 0.051693 0.0522376 0.0290081 0.072346 0.000000 0.088194 0.0345320 0.0280199 0.0110078 0.011008 0.000000 0.020210 0.0054392 0.0037983 0.1229404 0.0000000 0.12979656 0.00786854 0.03522505 0.074169 0.0163360 0.0071258 0.011153 0.0034762 0.0000000 0.0356897 4 0.038875 0.0373514 0.00474361 4 0.0530991 0.0441258 0.00897331 0.4764854 8.8136e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.1931287 9.6689e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage -0.00067347 0.9712891 lowCoverage 1.00000 lowCoverage 0.038875 0.0599415 -1.8764e-02 4 0.0530991 0.0802088 -0.02710965 2.4400e-01 1.1713e-01 lowCoverage 7.8899e-01 1.0000e+00 lowCoverage 2.6101e-01 7.5507e-01 lowCoverage 9.5960e-01 1.0000e+00 lowCoverage -0.01343453 6.7305e-01 lowCoverage 1.0000e+00 lowCoverage 0.038875 0.0094458 0.02793183 4 0.0530991 0.0088668 0.0442323 2.2739e-03 9.9987e-01 lowCoverage 2.8783e-02 1.0000e+00 lowCoverage 8.9547e-03 9.9958e-01 lowCoverage 1.2267e-01 1.0000e+00 lowCoverage 0.03912231 2.1564e-03 lowCoverage 6.9562e-02 lowCoverage 0.0378531 0.0598540 -0.0219414 5 0.0923271 0.0668406 0.0254864 5.8617e-01 2.8765e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.2869e-01 5.2281e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01276107 7.0472e-01 lowCoverage 1.0000e+00 lowCoverage 0.0373514 0.0094458 0.02472896 4 0.0441258 0.0088668 0.03525899 2.9632e-02 9.9789e-01 lowCoverage 2.3150e-01 1.0000e+00 lowCoverage 2.0109e-01 9.1300e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 3.9796e-02 2.8485e-02 lowCoverage 0.45213640 lowCoverage 0.0599415 0.0094458 0.0483148 4 0.0802088 0.0088668 0.0713420 8.5538e-02 9.8778e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 3.9285e-01 9.3279e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0525568 1.2669e-01 lowCoverage 5.2786e-01 lowCoverage chr16 84053450 84054450 49425 ENSG00000220991 0.028595 795 53 0.064187 904 40 0.064600 1210 48 0.024412 573 32 0.0566778 1254 38 0.111959 1056 51 0.036722 1493 57 0.078852 759 41 0.0886009 1407 56 0.032001 1291 43 0.088664 1044 46 0.103351 1448 54 0.0284776 1266 45 0.0997422 186 7 0.0209705 1311 48 0.0449917 1433 47 0.035693 1193 47 0.082827 778 40 0.070193 765 40 0.0564187 977 48 0.089710 336 31 0.034936 510 21 0.047837 899 47 0.023885 356 32 0.038337 414 18 0.0164511 1276 49 0.0317464 577 38 0.078455 463 36 0.049344 619 43 0.0195228 1304 55 0.012913 1010 50 0.058568 1025 55 0.0401610 796 39 0.0469523 883 40 0.1576190 423 17 0.050232 300 20 0.078245 434 37 0.0607826 794 50 0.029880 1033 55 0.0223077 800 45 0.0243589 859 40 0.0113544 633 37 0.038426 821 33 0.0550280 0.067284 0.0773997 0.049305 0.0479111 0.078159 0.065954 0.0448523 0.0464602 0.0414961 0.0746528 0.119420 0.0169181 NA 0.0375078 0.0519269 0.045411 0.038736 0.0261695 0.0358397 0.127346 0.026583 0.053252 0.0484103 0.0337577 0.0179962 0.032233 0.102215 0.070778 0.0160425 0.0252912 0.0919731 0.0335304 0.06031790 0.10515864 0.06699633 0.098772 0.0704293 0.0293774 0.050704 0.0329014 0.0368845 0.0349148 13 0.042898 0.0362954 0.00962646 47 0.0929277 0.0508573 0.04207043 0.0188837 1.0000e+00 weaklyHypermeth 1.00000 1.0000e+00 insignificant 0.0345623 9.9999e-01 weaklyHypermeth 1.00000 1.0000e+00 insignificant 0.01908788 0.0550023 insignificant 1.00000 insignificant 0.042515 0.0534435 -1.0880e-02 31 0.0595820 0.0605320 -0.00094993 2.1415e-01 7.3758e-02 insignificant 6.9755e-01 1.0000e+00 insignificant 2.2838e-01 8.0247e-01 insignificant 8.6180e-01 1.0000e+00 insignificant -0.01143525 5.6851e-01 insignificant 1.0000e+00 insignificant 0.042529 0.0287024 0.02320042 37 0.0626116 0.0316540 0.0309576 1.2264e-07 1.0000e+00 weaklyHypermeth 3.3146e-06 1.0000e+00 weaklyHypermeth 1.8070e-05 1.0000e+00 weaklyHypermeth 6.0233e-04 1.0000e+00 weaklyHypermeth 0.03563126 1.9705e-04 weaklyHypermeth 1.6121e-02 weaklyHypermeth 0.0362434 0.0534435 -0.0202666 31 0.0525532 0.0605320 -0.0079788 9.8916e-01 1.6408e-04 weaklyHypometh 1.0000e+00 7.1338e-03 weaklyHypometh 9.8434e-01 2.5419e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03052313 1.5899e-01 insignificant 6.1864e-01 insignificant 0.0361460 0.0287024 0.00926529 36 0.0382762 0.0316540 0.00662219 8.3551e-02 9.9998e-01 insignificant 5.4609e-01 1.0000e+00 insignificant 2.6648e-01 9.9995e-01 insignificant 1.0000e+00 1.0000000 insignificant 1.6543e-02 6.4785e-02 insignificant 0.69436945 insignificant 0.0534877 0.0287024 0.0321712 20 0.0636099 0.0316540 0.0319558 1.4177e-03 1.0000e+00 weaklyHypermeth 3.7309e-02 1.0000e+00 weaklyHypermeth 2.0347e-01 1.0000e+00 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0470665 4.6038e-02 weaklyHypermeth 2.4752e-01 insignificant chr16 84062950 84063950 49426 ENSG00000220991 0.914235 194 7 0.681415 246 8 0.574772 288 8 0.857238 226 6 0.7903990 189 8 0.894428 191 7 0.728256 324 9 0.712871 181 7 0.6896963 191 5 0.602744 160 5 0.914075 242 7 0.704498 215 6 0.6587442 214 9 0.3571429 17 2 0.8314536 143 5 0.5646261 204 5 0.658204 232 7 0.695724 201 7 0.741625 184 6 0.7495122 138 7 0.813261 105 6 0.626042 63 3 0.845116 123 8 0.689020 87 6 0.863446 126 6 0.7424859 252 9 0.6257576 65 4 0.559925 106 7 0.691843 136 7 0.8379056 272 8 0.883239 181 8 0.916218 186 7 0.4985830 272 8 0.7835621 183 7 0.7474777 253 7 0.677761 119 6 0.508065 173 12 0.5085942 277 8 0.774536 214 7 0.6124553 264 7 0.7269962 287 6 0.6798677 219 6 0.830507 286 6 0.8469249 0.761109 0.7753786 0.879647 0.9055367 0.859822 0.844625 0.7244717 0.8734065 0.8054394 0.8318884 0.754371 0.8250553 0.782666 0.7719922 0.7996089 0.698181 0.627956 0.7224329 0.8648037 0.841455 0.752542 0.792760 0.9486107 0.7652765 0.8127725 0.704186 0.857474 0.857393 0.8706565 0.8465246 0.8943732 0.5622969 0.73233795 0.72479618 0.52055832 0.799781 0.4395143 0.6722711 0.543808 0.5667100 0.4808670 0.7175004 4 0.800754 0.8437133 -0.03332248 7 0.6519530 0.7058424 -0.05388936 0.9991658 4.9312e-02 weaklyHypometh 1.00000 6.6593e-01 insignificant 0.9929817 2.7890e-01 insignificant 1.00000 1.0000e+00 insignificant -0.04177206 0.3660510 insignificant 1.00000 insignificant 0.800955 0.6026646 2.3056e-01 7 0.7021032 0.5659729 0.13613034 1.8354e-09 9.0017e-01 hypermethylated 1.4010e-08 1.0000e+00 hypermethylated 4.4800e-03 9.6456e-01 weaklyHypermeth 2.7317e-02 1.0000e+00 weaklyHypermeth 0.09540904 1.5706e-01 insignificant 6.4988e-01 insignificant 0.801112 0.6559055 0.18968702 6 0.6891212 0.6552176 0.0339036 9.5107e-10 8.5403e-01 weaklyHypermeth 3.6580e-08 1.0000e+00 weaklyHypermeth 2.3393e-04 7.6970e-01 weaklyHypermeth 5.5698e-03 1.0000e+00 weaklyHypermeth -0.00878943 8.5893e-01 insignificant 1.0000e+00 insignificant 0.8442093 0.6026646 0.2135239 8 0.7601379 0.5659729 0.1941650 6.3563e-08 9.9699e-01 hypermethylated 4.9659e-07 1.0000e+00 hypermethylated 1.3105e-03 9.9555e-01 weaklyHypermeth 9.1645e-03 1.0000e+00 weaklyHypermeth 0.13718110 5.8242e-02 insignificant 2.9121e-01 insignificant 0.8443787 0.6559055 0.18783645 6 0.7425007 0.6552176 0.08728304 1.7099e-08 9.8440e-01 weaklyHypermeth 6.8397e-07 1.0000e+00 weaklyHypermeth 1.6456e-03 9.1631e-01 weaklyHypermeth 3.5012e-02 1.0000000 weaklyHypermeth 3.2983e-02 5.2904e-01 insignificant 1.00000000 insignificant 0.6040000 0.6559055 0.0052564 6 0.5709750 0.6552176 -0.0842427 6.4602e-01 2.3653e-01 insignificant 1.0000e+00 8.2414e-01 insignificant 9.0367e-01 2.4743e-01 insignificant 1.0000e+00 9.4080e-01 insignificant -0.1041985 1.4754e-01 insignificant 5.9017e-01 insignificant chr16 84119850 84120850 49433 ENSG00000220991 0.928272 136 7 0.854611 156 9 0.737714 137 9 0.895675 220 7 0.9228507 69 5 0.888515 202 8 0.928899 90 4 0.836083 153 9 0.9269616 194 9 0.872562 190 3 0.835833 126 9 0.843498 77 4 0.9018750 302 9 0.9175926 107 3 0.9554165 178 6 0.9895833 50 2 0.980000 22 2 0.839086 299 7 0.927353 114 7 0.9335498 218 9 0.925131 106 7 0.903216 121 7 0.909615 144 4 0.892308 71 8 0.953781 122 7 0.9245271 174 9 0.7720833 79 7 0.746760 55 2 0.695221 163 4 0.9583542 206 9 0.851906 169 8 0.868756 269 9 0.6764550 110 7 0.7788196 114 7 0.3333333 79 3 0.841126 41 3 0.835278 76 6 0.8280313 157 7 0.920065 139 3 0.8613169 151 3 0.9863872 243 3 0.9718750 141 3 0.943134 240 7 0.8971791 0.838656 0.8380446 0.892065 0.9470416 0.922981 0.899382 0.8575564 0.8923727 0.9089061 0.9146233 0.864315 0.9392288 0.933582 0.8972604 0.9606166 0.925986 0.870506 0.8609745 0.8867190 0.865425 0.920484 0.891217 0.9590509 0.9235601 0.9493295 0.901493 0.780802 0.866943 0.9516845 0.8822677 0.9114175 0.6597963 0.60157706 0.12882137 0.80745593 0.831799 0.8947176 0.8954174 0.894527 0.9595729 0.9379193 0.9007928 2 0.895724 0.8999404 -0.00950687 7 0.8843523 0.8675649 0.01678742 0.4120520 4.7140e-01 insignificant 1.00000 1.0000e+00 insignificant 0.3963248 8.0063e-01 insignificant 1.00000 1.0000e+00 insignificant 0.02899160 0.3127500 insignificant 1.00000 insignificant 0.895724 0.6949740 1.9152e-01 7 0.8843523 0.7446102 0.13974216 6.8237e-11 3.8463e-01 weaklyHypermeth 5.8825e-10 1.0000e+00 weaklyHypermeth 8.1990e-05 3.0227e-01 weaklyHypermeth 6.8325e-04 1.0000e+00 weaklyHypermeth 0.18028936 7.5302e-02 insignificant 3.7278e-01 insignificant 0.895675 0.9245077 -0.03178964 3 0.8816036 0.9275242 -0.0459205 9.0404e-01 7.8120e-04 lowCoverage 1.0000e+00 3.7200e-02 lowCoverage 9.8291e-01 4.4989e-03 lowCoverage 1.0000e+00 1.8479e-01 lowCoverage -0.04075909 1.5555e-01 lowCoverage 9.3902e-01 lowCoverage 0.8999404 0.6949740 0.2027666 7 0.8675649 0.7446102 0.1229547 5.9829e-07 5.9520e-01 hypermethylated 4.3354e-06 1.0000e+00 hypermethylated 1.6841e-03 7.9404e-01 weaklyHypermeth 1.1429e-02 1.0000e+00 weaklyHypermeth 0.15129776 1.2273e-01 insignificant 5.0928e-01 insignificant 0.9015606 0.9245077 -0.02211860 3 0.8870379 0.9275242 -0.04048621 8.4239e-01 2.5438e-02 lowCoverage 1.0000e+00 6.0859e-01 lowCoverage 9.8609e-01 2.4376e-02 lowCoverage 1.0000e+00 0.8125443 lowCoverage -6.9751e-02 5.4533e-02 lowCoverage 0.64156107 lowCoverage 0.6940559 0.9245077 -0.2376365 3 0.7384557 0.9275242 -0.1890684 9.9998e-01 1.5887e-03 lowCoverage 1.0000e+00 9.5131e-03 lowCoverage 9.9998e-01 4.1353e-03 lowCoverage 1.0000e+00 3.2820e-02 lowCoverage -0.2210484 3.9764e-02 lowCoverage 2.2214e-01 lowCoverage chr16 84126150 84127150 49434 ENSG00000220991 0.872750 443 11 0.812774 577 11 0.764736 389 12 0.879168 434 11 0.7684702 312 10 0.751466 669 13 0.734697 375 12 0.758545 444 13 0.8038031 391 13 0.753336 397 13 0.880098 604 13 0.713296 250 11 0.9075057 445 12 0.8590867 221 7 0.8334419 468 13 0.7326508 191 9 0.460623 111 6 0.848698 486 11 0.867724 499 13 0.7682933 441 13 0.789664 273 13 0.759183 246 11 0.806971 399 13 0.778520 269 12 0.821330 164 10 0.7881354 565 13 0.7802329 423 14 0.574668 212 12 0.783580 421 12 0.8249591 625 13 0.875405 543 13 0.866669 653 13 0.7571910 381 13 0.7102875 306 11 0.7222222 455 6 0.717207 86 6 0.725860 357 16 0.7936276 596 13 0.780179 376 11 0.5984663 413 12 0.5991992 373 9 0.3658888 438 11 0.761127 326 11 0.8655836 0.785157 0.7673239 0.893258 0.8383164 0.780198 0.822854 0.8108379 0.8180132 0.8817056 0.8843348 0.705879 0.9001143 0.837487 0.8775854 0.8490428 0.606454 0.825467 0.8829989 0.8778046 0.935834 0.773331 0.878688 0.8703665 0.8988598 0.8917037 0.859793 0.849199 0.835461 0.8438929 0.9075873 0.9119001 0.8684188 0.74987161 0.91425070 0.67843869 0.910526 0.7336384 0.8317571 0.666810 0.5907094 0.4188944 0.7631075 10 0.831717 0.8660547 -0.03998100 12 0.7249075 0.6899543 0.03495322 0.9962073 6.7936e-03 weaklyHypometh 1.00000 2.0587e-01 insignificant 0.9960114 2.2505e-02 weaklyHypometh 1.00000 5.4890e-01 insignificant 0.00111509 0.9714193 insignificant 1.00000 insignificant 0.831757 0.8555708 -2.2747e-02 12 0.7234315 0.6694246 0.05400686 1.8339e-01 2.4256e-05 weaklyHypometh 6.0927e-01 9.3293e-04 weaklyHypometh 9.3621e-01 8.7310e-05 weaklyHypometh 1.0000e+00 4.2474e-03 weaklyHypometh 0.05082550 5.6363e-02 insignificant 2.9053e-01 insignificant 0.832003 0.6277259 0.18841986 11 0.7528432 0.5680950 0.1847482 3.0634e-17 9.9997e-01 weaklyHypermeth 3.0634e-15 1.0000e+00 weaklyHypermeth 8.1689e-08 9.9983e-01 weaklyHypermeth 5.8349e-06 1.0000e+00 weaklyHypermeth 0.16758594 8.6744e-02 insignificant 6.8844e-01 insignificant 0.8659708 0.8555708 0.0180160 12 0.6717163 0.6694246 0.0022917 2.5640e-01 2.0838e-03 inconclusive 8.1655e-01 6.5119e-02 inconclusive 8.6840e-01 8.5059e-03 inconclusive 1.0000e+00 3.1503e-01 insignificant 0.04971041 6.8640e-02 insignificant 3.2842e-01 insignificant 0.8691099 0.6277259 0.22653101 11 0.7272719 0.5680950 0.15917684 7.2364e-16 1.0000e+00 hypermethylated 9.0455e-14 1.0000e+00 hypermethylated 6.6059e-08 1.0000e+00 hypermethylated 9.4370e-06 1.0000000 hypermethylated 1.6647e-01 8.8351e-02 insignificant 0.78027746 insignificant 0.8567493 0.6275325 0.1802371 11 0.7112637 0.5411010 0.1701627 6.8550e-06 9.9998e-01 weaklyHypermeth 4.5700e-04 1.0000e+00 weaklyHypermeth 2.4777e-04 1.0000e+00 weaklyHypermeth 1.4575e-02 1.0000e+00 weaklyHypermeth 0.1167604 1.9348e-01 insignificant 7.1661e-01 insignificant chr16 84133650 84134650 49435 ENSG00000220991 0.909943 316 6 0.723106 336 6 0.725228 145 6 0.868354 241 6 0.8666667 102 6 0.910860 424 6 0.824684 126 6 0.788739 208 6 0.8111326 180 6 0.853720 104 4 0.767512 258 6 0.644671 106 4 0.7445091 142 4 0.8361111 107 4 0.7792719 170 4 0.8847518 60 1 0.250000 4 0 0.751494 267 6 0.793361 205 6 0.8178522 316 6 0.888889 55 6 0.836458 54 3 0.718713 177 6 0.742923 142 6 0.900082 107 4 0.8362126 393 6 0.6840493 143 6 0.925843 77 4 0.871174 205 6 0.8288452 443 6 0.772490 323 6 0.870420 307 6 0.5149472 214 6 0.8521825 81 5 0.4578059 207 4 0.752914 138 3 0.645243 285 6 0.8485418 246 6 0.827899 204 6 0.6915140 164 6 0.7972027 294 6 0.8017517 195 6 0.839851 192 6 0.8858934 0.659689 0.6746411 0.786180 0.7786550 0.869991 0.786767 0.7305120 0.6985210 0.7994121 0.7996639 0.677696 0.6077927 0.777871 0.7314840 0.8514838 NA 0.659216 0.7211217 0.7831386 0.967836 0.674287 0.801016 0.7224490 0.8012199 0.7919195 0.646503 0.868982 0.801914 0.7659045 0.7197784 0.8876308 0.3214060 0.57179407 0.23406618 0.70873838 0.538815 0.8538916 0.6971217 0.641447 0.7069472 0.6996189 0.7035489 2 0.784910 0.8061856 -0.01619577 6 0.8146341 0.8247293 -0.01009516 0.8185208 2.7496e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9699901 7.4601e-02 insignificant 1.00000 9.3251e-01 insignificant -0.04540985 0.2495236 lowCoverage 1.00000 lowCoverage 0.784910 0.6285226 1.9275e-01 6 0.8146341 0.6381744 0.17645975 1.2067e-08 9.2696e-01 weaklyHypermeth 8.6812e-08 1.0000e+00 weaklyHypermeth 8.4328e-02 8.9411e-01 insignificant 3.6192e-01 1.0000e+00 insignificant 0.09899262 2.3001e-01 lowCoverage 8.5964e-01 lowCoverage 0.784910 0.7826501 0.03695980 6 0.8146341 0.7951767 0.0194574 1.9019e-01 7.2120e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.3954e-01 6.4467e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01404513 7.3709e-01 lowCoverage 1.0000e+00 lowCoverage 0.8061856 0.6285226 0.2056401 6 0.8247293 0.6381744 0.1865549 5.0617e-07 9.8091e-01 hypermethylated 3.6947e-06 1.0000e+00 hypermethylated 2.3349e-02 9.1538e-01 weaklyHypermeth 1.1559e-01 1.0000e+00 insignificant 0.14440247 9.1509e-02 insignificant 4.1220e-01 insignificant 0.8061856 0.7826501 0.05458510 6 0.8247293 0.7951767 0.02955260 5.9234e-03 8.1561e-01 weaklyHypermeth 5.7509e-02 1.0000e+00 weaklyHypermeth 1.5595e-02 8.9527e-01 weaklyHypermeth 1.8348e-01 1.0000000 insignificant 3.1365e-02 3.8328e-01 insignificant 1.00000000 insignificant 0.6285226 0.7826501 -0.1388203 6 0.6381744 0.7951767 -0.1570023 9.1367e-01 1.5598e-02 weaklyHypometh 1.0000e+00 7.3924e-02 weaklyHypometh 5.7603e-01 5.1240e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.1130377 1.7169e-01 insignificant 6.5281e-01 insignificant chr16 84135250 84136250 49436 ENSG00000220991 0.947843 188 5 0.906014 336 5 0.854066 87 5 0.970122 75 5 0.9300699 38 4 0.917307 238 5 0.873160 44 5 0.904678 188 5 0.9164018 101 5 0.929334 152 5 0.961346 245 5 NA 0 0 0.9425544 238 5 NA 0 0 0.8811391 92 5 1.0000000 8 0 0.582418 56 4 0.954638 98 5 0.915205 140 5 0.9318967 215 5 0.855465 107 5 0.883636 32 5 0.915513 155 5 0.945455 72 5 1.000000 15 1 0.9432195 348 5 0.8632323 71 5 0.817949 33 2 0.923951 166 5 0.9687084 295 5 0.912362 279 5 0.920764 313 5 0.8717693 232 5 0.9360269 172 5 1.0000000 68 2 0.950000 10 0 0.973913 66 5 0.9602177 273 5 0.876646 80 5 0.9221604 175 5 0.9224319 90 5 0.9381868 114 5 0.874881 63 5 0.9455762 0.859534 0.7761116 0.947561 0.8606778 0.908097 0.885281 0.9012864 0.8724368 0.9028120 0.9560738 NA 0.9366601 NA 0.8974287 1.0000000 0.441336 0.936054 0.9278925 0.9370498 0.832351 0.893706 0.905986 0.9076923 0.9792788 0.9358713 0.854600 0.809073 0.917231 0.9639562 0.8816939 0.9163128 0.8582498 0.88717949 0.99165279 0.89615385 0.955853 0.9486961 0.8541042 0.915366 0.9219740 0.9020499 0.8697344 1 0.921229 0.9231177 -0.00073635 5 0.9225069 0.9248599 -0.00235302 0.6871837 5.8789e-01 insignificant 1.00000 1.0000e+00 insignificant 0.4004833 8.5266e-01 insignificant 1.00000 1.0000e+00 insignificant -0.00595496 0.8169781 lowCoverage 1.00000 lowCoverage 0.921229 0.9354446 -1.5438e-02 5 0.9225069 0.9358042 -0.01329728 8.7604e-01 1.2521e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8036e-01 7.3805e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04208824 1.4152e-01 lowCoverage 6.0739e-01 lowCoverage 0.921229 0.9022989 0.01318470 5 0.9225069 0.9120450 0.0104620 4.5423e-01 8.9037e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.2235e-01 9.2527e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00029495 9.9054e-01 lowCoverage 1.0000e+00 lowCoverage 0.9231177 0.9354446 -0.0156208 5 0.9248599 0.9358042 -0.0109443 7.7962e-01 2.8599e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4868e-01 5.2473e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03613328 1.4387e-01 lowCoverage 5.7548e-01 lowCoverage 0.9231177 0.9022989 0.01425775 5 0.9248599 0.9120450 0.01281498 2.8890e-01 9.0092e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.4276e-01 8.4741e-01 insignificant 1.0000e+00 1.0000000 insignificant 5.6600e-03 7.7772e-01 lowCoverage 1.00000000 lowCoverage 0.9354446 0.9022989 0.0277495 5 0.9358042 0.9120450 0.0237592 1.8402e-01 9.4354e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.0007e-01 9.7662e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0417933 9.1608e-02 lowCoverage 4.1265e-01 lowCoverage chr16 84154250 84155250 49437 ENSG00000220991 0.725950 197 7 0.793163 126 8 0.910871 142 9 0.909316 181 9 0.6351064 149 7 0.973848 375 9 0.781607 180 9 0.747893 187 8 0.7037149 117 6 0.878321 87 5 0.822042 231 8 0.908333 40 4 0.8165224 124 6 0.8611111 88 4 0.8544657 165 6 0.8703704 54 7 NA 0 0 0.870725 163 7 0.839417 263 8 0.8728623 311 7 0.903920 71 7 0.857143 47 4 0.724109 172 5 0.906250 86 6 0.774275 193 6 0.8927047 202 9 0.7322259 240 7 0.734464 90 6 0.937631 196 7 0.7951462 175 7 0.824920 181 7 0.908626 312 8 0.7261532 169 9 0.8258730 194 8 0.7959184 135 5 0.852412 62 5 0.660880 132 6 0.8231818 248 9 0.821165 257 7 0.8227994 225 9 0.7284483 139 7 0.7792208 130 4 0.817965 130 8 0.9229458 0.864215 0.8781388 0.967712 0.8544252 0.972806 0.931849 0.9006963 0.8721460 0.9511373 0.8879180 0.998264 0.9039785 0.907854 0.8666308 0.9965278 NA 0.906645 0.9142387 0.9577177 0.916907 0.951282 0.898522 0.9968741 0.8157343 0.9083014 0.889093 0.823839 0.934832 0.9519250 0.9552160 0.9306909 0.9021447 0.95006614 0.98953820 0.96101346 0.957465 0.9876894 0.9632865 0.979056 0.9083196 0.9671227 0.9721320 2 0.920050 0.9016811 0.00597532 7 0.6976111 0.7396677 -0.04205663 0.6167124 8.9350e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9517003 6.2249e-01 insignificant 1.00000 1.0000e+00 insignificant -0.00232094 0.9381821 insignificant 1.00000 insignificant 0.921185 0.9104478 -2.5105e-02 7 0.8575656 0.8415114 0.01605417 7.2426e-01 3.0666e-02 weaklyHypometh 1.0000e+00 5.8974e-01 insignificant 7.7661e-01 9.9465e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 0.04956047 1.9251e-01 insignificant 7.5122e-01 insignificant 0.920845 0.9364359 -0.01724514 7 0.7666565 0.7794348 -0.0127783 5.7869e-01 1.5055e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.6228e-01 9.7024e-02 insignificant 1.0000e+00 9.5051e-01 insignificant 0.03637702 1.8984e-01 insignificant 1.0000e+00 insignificant 0.9023517 0.9094782 -0.0246256 8 0.7448901 0.7713855 -0.0264954 5.6401e-01 4.3605e-02 weaklyHypometh 1.0000e+00 9.9102e-01 insignificant 7.7519e-01 2.7411e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.05188140 1.9333e-01 insignificant 7.0816e-01 insignificant 0.9032753 0.9364359 -0.02042079 7 0.8277589 0.7794348 0.04832413 5.1855e-01 1.3073e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.2542e-01 3.5035e-01 insignificant 1.0000e+00 1.0000000 insignificant 3.8698e-02 2.0510e-01 insignificant 1.00000000 insignificant 0.9103522 0.9374289 0.0098126 7 0.8256626 0.8073783 0.0182843 5.1873e-01 8.6806e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.5964e-01 9.1827e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0131835 7.1538e-01 insignificant 1.0000e+00 insignificant chr16 84154350 84155350 49438 ENSG00000220991 0.725950 197 7 0.793163 126 8 0.910871 142 9 0.909316 181 9 0.6351064 149 7 0.973848 375 9 0.781607 180 9 0.747893 187 8 0.7037149 117 6 0.878321 87 5 0.822042 231 8 0.908333 40 4 0.8165224 124 6 0.8611111 88 4 0.8544657 165 6 0.8703704 54 7 NA 0 0 0.870725 163 7 0.839417 263 8 0.8728623 311 7 0.903920 71 7 0.857143 47 4 0.724109 172 5 0.906250 86 6 0.774275 193 6 0.8927047 202 9 0.7322259 240 7 0.734464 90 6 0.937631 196 7 0.7951462 175 7 0.824920 181 7 0.908626 312 8 0.7261532 169 9 0.8258730 194 8 0.7959184 135 5 0.852412 62 5 0.660880 132 6 0.8231818 248 9 0.821165 257 7 0.8227994 225 9 0.7284483 139 7 0.7792208 130 4 0.817965 130 8 0.9229458 0.864215 0.8781388 0.967712 0.8544252 0.972806 0.931849 0.9006963 0.8721460 0.9511373 0.8879180 0.998264 0.9039785 0.907854 0.8666308 0.9965278 NA 0.906645 0.9142387 0.9577177 0.916907 0.951282 0.898522 0.9968741 0.8157343 0.9083014 0.889093 0.823839 0.934832 0.9519250 0.9552160 0.9306909 0.9021447 0.95006614 0.98953820 0.96101346 0.957465 0.9876894 0.9632865 0.979056 0.9083196 0.9671227 0.9721320 2 0.920050 0.9016811 0.00597532 7 0.6976111 0.7396677 -0.04205663 0.6167124 8.9350e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9517003 6.2249e-01 insignificant 1.00000 1.0000e+00 insignificant -0.00232094 0.9381821 insignificant 1.00000 insignificant 0.921185 0.9104478 -2.5105e-02 7 0.8575656 0.8415114 0.01605417 7.2426e-01 3.0666e-02 weaklyHypometh 1.0000e+00 5.8974e-01 insignificant 7.7661e-01 9.9465e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 0.04956047 1.9251e-01 insignificant 7.5122e-01 insignificant 0.920845 0.9364359 -0.01724514 7 0.7666565 0.7794348 -0.0127783 5.7869e-01 1.5055e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.6228e-01 9.7024e-02 insignificant 1.0000e+00 9.5051e-01 insignificant 0.03637702 1.8984e-01 insignificant 1.0000e+00 insignificant 0.9023517 0.9094782 -0.0246256 8 0.7448901 0.7713855 -0.0264954 5.6401e-01 4.3605e-02 weaklyHypometh 1.0000e+00 9.9102e-01 insignificant 7.7519e-01 2.7411e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.05188140 1.9333e-01 insignificant 7.0816e-01 insignificant 0.9032753 0.9364359 -0.02042079 7 0.8277589 0.7794348 0.04832413 5.1855e-01 1.3073e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.2542e-01 3.5035e-01 insignificant 1.0000e+00 1.0000000 insignificant 3.8698e-02 2.0510e-01 insignificant 1.00000000 insignificant 0.9103522 0.9374289 0.0098126 7 0.8256626 0.8073783 0.0182843 5.1873e-01 8.6806e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.5964e-01 9.1827e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0131835 7.1538e-01 insignificant 1.0000e+00 insignificant chr16 84165350 84166350 49440 ENSG00000220991 0.657144 654 17 0.649682 372 14 0.622869 387 15 0.580461 792 17 0.5913107 180 12 0.747358 769 17 0.656117 288 11 0.684110 429 17 0.7029516 552 15 0.631001 582 15 0.775176 513 17 0.588824 461 14 0.6822822 626 15 0.6548612 394 15 0.5739298 451 15 0.6128906 171 10 0.495846 121 13 0.532114 858 17 0.792588 396 17 0.5313338 471 17 0.584700 167 11 0.417322 477 15 0.723011 464 16 0.663354 295 16 0.636090 312 15 0.7008618 539 14 0.6757842 426 15 0.669300 268 14 0.690935 380 15 0.6529148 579 17 0.681432 493 17 0.716181 590 17 0.3942419 516 16 0.3534912 355 16 0.6602272 584 14 0.536640 235 14 0.639621 387 17 0.5973560 525 15 0.441920 732 17 0.4197765 598 17 0.4052387 892 17 0.4312648 437 16 0.369905 670 17 0.7956030 0.743969 0.6051038 0.751036 0.7064564 0.852023 0.786789 0.7658654 0.7476376 0.7658470 0.8341069 0.709252 0.7304648 0.747485 0.6912788 0.7076592 0.657047 0.600812 0.8234467 0.7128524 0.688931 0.520791 0.803360 0.7743498 0.7229755 0.7962343 0.775658 0.782762 0.791562 0.7966442 0.8115062 0.8469450 0.4344346 0.34744882 0.49214894 0.58386363 0.719048 0.6290105 0.6103270 0.557452 0.5485619 0.5871998 0.5256092 11 0.726149 0.7475436 -0.02433568 17 0.6164792 0.5734401 0.04303903 0.9937998 2.4748e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9967683 1.7146e-01 insignificant 1.00000 1.0000e+00 insignificant -0.01284801 0.6693496 insignificant 1.00000 insignificant 0.726168 0.5368947 1.7460e-01 16 0.6081146 0.5491944 0.05892015 1.7759e-12 9.9687e-01 weaklyHypermeth 1.6444e-11 1.0000e+00 weaklyHypermeth 1.9727e-06 9.9256e-01 weaklyHypermeth 2.2165e-05 1.0000e+00 weaklyHypermeth 0.10787950 9.8783e-02 insignificant 4.5106e-01 insignificant 0.726321 0.4701111 0.19155883 17 0.6438860 0.4125979 0.2312882 3.9110e-28 1.0000e+00 weaklyHypermeth 7.8220e-26 1.0000e+00 weaklyHypermeth 1.0524e-19 1.0000e+00 weaklyHypermeth 5.2618e-17 1.0000e+00 weaklyHypermeth 0.22452153 2.2358e-09 hypermethylated 2.2358e-06 hypermethylated 0.7481928 0.5368947 0.2051292 16 0.6319765 0.5491944 0.0827820 1.5612e-10 9.9962e-01 hypermethylated 1.4456e-09 1.0000e+00 hypermethylated 1.0965e-06 9.9229e-01 hypermethylated 1.5021e-05 1.0000e+00 hypermethylated 0.12072750 7.4353e-02 insignificant 3.4423e-01 insignificant 0.7486438 0.4701111 0.21111321 17 0.6691515 0.4125979 0.25655368 4.7283e-31 1.0000e+00 hypermethylated 1.5761e-28 1.0000e+00 hypermethylated 9.5104e-19 1.0000e+00 hypermethylated 9.5104e-16 1.0000000 hypermethylated 2.3737e-01 2.7715e-07 hypermethylated 0.00027715 hypermethylated 0.5367166 0.4701111 0.0717567 16 0.5226765 0.4125979 0.1100786 1.3046e-05 6.2419e-01 weaklyHypermeth 7.4885e-04 1.0000e+00 weaklyHypermeth 1.2345e-05 8.6891e-01 weaklyHypermeth 1.2345e-03 1.0000e+00 weaklyHypermeth 0.1166420 7.8142e-02 insignificant 3.6357e-01 insignificant chr16 84178350 84179350 49442 ENSG00000220991 0.487912 95 4 0.492388 162 5 0.620908 152 5 0.568485 106 3 0.3860317 78 5 0.577159 103 4 0.320837 158 5 0.493557 120 5 0.4891435 192 6 0.453507 147 5 0.551941 175 6 0.415906 114 5 0.2148871 215 5 0.2113051 65 3 0.3051540 195 5 0.5176902 106 5 0.485862 67 4 0.604610 104 3 0.430723 115 5 0.4228054 75 4 0.693917 65 5 0.313929 85 3 0.408892 119 5 0.630787 73 5 0.360450 63 3 0.4897644 162 6 0.5119048 68 4 0.554924 60 5 0.570424 105 5 0.3537919 163 6 0.443676 136 5 0.641447 131 5 0.8235219 134 5 0.8049102 114 5 0.6863799 74 2 0.840000 29 3 0.726839 110 5 0.7136430 125 5 0.295357 103 3 0.3880180 115 4 0.3575826 116 3 0.3243402 113 3 0.431250 114 3 0.4481343 0.345281 0.4541000 0.274258 0.3603915 0.597304 0.331658 0.4255338 0.3495707 0.4232677 0.5766613 0.367064 0.1716193 0.279357 0.2427723 0.4187162 0.480793 0.382676 0.3750614 0.4079010 0.458673 0.239961 0.384143 0.4903976 0.4724795 0.3994351 0.520725 0.386530 0.481105 0.2224635 0.3854415 0.5818100 0.8355392 0.88738265 0.80064526 0.74404145 0.754555 0.7423667 0.2459557 0.318946 0.1780159 0.2394512 0.2422855 3 0.419100 0.4560976 -0.04706747 5 0.3484440 0.5103507 -0.16190666 0.9963683 3.7826e-02 weaklyHypometh 1.00000 5.5626e-01 insignificant 0.9950426 2.9487e-01 insignificant 1.00000 1.0000e+00 insignificant -0.04528483 0.3194103 lowCoverage 1.00000 lowCoverage 0.421156 0.7849829 -3.7959e-01 5 0.4609440 0.5998834 -0.13893933 9.8679e-01 1.8647e-21 hypomethylated 1.0000e+00 2.3308e-19 hypomethylated 9.9939e-01 3.7799e-08 hypomethylated 1.0000e+00 4.7248e-06 hypomethylated -0.31334164 3.2350e-07 lowCoverage 9.2429e-06 lowCoverage 0.419431 0.2174688 0.13080439 3 0.4645921 0.3562879 0.1083041 3.4154e-04 2.6889e-02 lowCoverage 4.7436e-03 4.1367e-01 lowCoverage 2.2459e-04 5.6042e-01 lowCoverage 5.4779e-03 1.0000e+00 lowCoverage 0.09323109 1.8909e-02 lowCoverage 2.9387e-01 lowCoverage 0.4560261 0.7890223 -0.3438644 5 0.5118294 0.6855810 -0.1737516 9.9860e-01 3.4684e-15 hypomethylated 1.0000e+00 4.3355e-13 hypomethylated 9.9992e-01 4.6857e-07 hypomethylated 1.0000e+00 5.2063e-05 hypomethylated -0.26805682 1.8426e-05 lowCoverage 3.9205e-04 lowCoverage 0.4559543 0.2174688 0.15371789 3 0.5138009 0.3562879 0.15751300 1.6429e-03 6.4137e-01 lowCoverage 1.8884e-02 1.0000e+00 lowCoverage 1.9067e-03 8.4129e-01 lowCoverage 3.8135e-02 1.0000000 lowCoverage 1.3852e-01 5.7907e-03 lowCoverage 0.22272020 lowCoverage 0.7903780 0.2174688 0.5428098 3 0.7998445 0.3562879 0.4435566 1.1226e-11 9.9999e-01 lowCoverage 1.6037e-09 1.0000e+00 lowCoverage 4.2826e-06 9.9998e-01 lowCoverage 5.3532e-04 1.0000e+00 lowCoverage 0.4065727 1.1554e-06 lowCoverage 1.9256e-04 lowCoverage chr16 84242450 84243450 49446 KIAA0182 ENSG00000131149 0.926452 532 18 0.843039 390 16 0.896356 386 19 0.799192 522 18 0.8494029 284 19 0.938717 637 19 0.856871 364 19 0.864191 371 19 0.8694773 241 17 0.947211 337 17 0.938339 563 19 0.944141 176 15 0.8834796 351 17 0.8277999 148 12 0.9130948 293 17 0.7000000 40 3 0.929869 64 5 0.774427 702 17 0.850067 568 19 0.9342945 418 18 0.859335 233 18 0.652236 246 9 0.915928 365 19 0.780783 186 13 0.888844 604 12 0.8471741 383 19 0.8332741 346 17 0.827917 160 14 0.913563 449 19 0.8627926 391 20 0.913217 470 20 0.904583 563 18 0.5262132 390 19 0.5956910 528 19 0.7104167 454 14 0.449034 247 12 0.556163 251 20 0.5655146 687 20 0.729646 395 18 0.5914571 439 17 0.8056781 493 17 0.7315876 630 18 0.626595 366 18 0.9389621 0.900216 0.8861604 0.872574 0.9082048 0.909711 0.935384 0.9183082 0.8644273 0.9669522 0.9255017 0.934364 0.9298205 0.908401 0.8910623 0.8709955 0.927042 0.739770 0.9121013 0.9251080 0.949641 0.661148 0.948228 0.8957401 0.9428907 0.9082054 0.872089 0.877372 0.912735 0.9312014 0.9308130 0.9424598 0.5652741 0.60058853 0.79273856 0.38408510 0.618838 0.5048100 0.7416708 0.593819 0.7436872 0.7059538 0.6358078 9 0.896351 0.8960419 0.00108396 19 0.8180319 0.7981507 0.01988119 0.8403424 9.4334e-01 insignificant 1.00000 1.0000e+00 insignificant 0.8479397 8.9158e-01 insignificant 1.00000 1.0000e+00 insignificant 0.02435052 0.3613249 insignificant 1.00000 insignificant 0.896303 0.5438185 3.3931e-01 19 0.8456868 0.5732222 0.27246457 6.8809e-61 9.9995e-01 hypermethylated 4.3006e-59 1.0000e+00 hypermethylated 1.4394e-18 1.0000e+00 hypermethylated 1.1995e-16 1.0000e+00 hypermethylated 0.30714898 9.9846e-05 hypermethylated 1.5112e-03 hypermethylated 0.896430 0.6767111 0.22363066 17 0.8456868 0.6681912 0.1774956 5.4827e-51 1.0000e+00 hypermethylated 5.4827e-48 1.0000e+00 hypermethylated 2.5689e-20 1.0000e+00 hypermethylated 2.5689e-17 1.0000e+00 hypermethylated 0.17732826 7.2887e-03 weaklyHypermeth 1.6359e-01 insignificant 0.8961985 0.5436399 0.3348226 19 0.8160803 0.5538233 0.2622571 1.4555e-36 9.9998e-01 hypermethylated 5.5981e-35 1.0000e+00 hypermethylated 1.1632e-14 1.0000e+00 hypermethylated 7.7546e-13 1.0000e+00 hypermethylated 0.28279846 7.7959e-05 hypermethylated 1.2181e-03 hypermethylated 0.8962221 0.6767111 0.22068180 17 0.8240768 0.6681912 0.15588564 3.8070e-35 1.0000e+00 hypermethylated 3.8070e-32 1.0000e+00 hypermethylated 5.3753e-16 1.0000e+00 hypermethylated 1.7918e-13 1.0000000 hypermethylated 1.5298e-01 1.1766e-02 weaklyHypermeth 0.31133945 insignificant 0.5436399 0.6767502 -0.1032212 17 0.5538233 0.6682605 -0.1144372 6.1406e-02 3.5824e-05 weaklyHypometh 9.7058e-01 2.9853e-04 weaklyHypometh 8.1184e-01 3.3043e-03 weaklyHypometh 1.0000e+00 2.7767e-02 weaklyHypometh -0.1298207 3.6222e-02 weaklyHypometh 2.0465e-01 insignificant chr16 84889050 84890050 49449 ENSG00000199949 0.887364 173 7 0.552941 77 5 0.616164 115 7 0.922944 132 6 0.7120100 89 6 0.754183 165 5 0.557594 89 4 0.470833 30 2 0.7767009 53 5 0.783550 33 2 0.764596 188 7 0.402296 39 4 0.2060640 82 5 NA 0 0 0.4857448 76 5 0.8069328 37 3 0.586667 31 3 0.614425 165 4 0.867628 84 5 0.6709184 68 2 0.833824 57 5 0.324349 47 3 0.762131 115 7 0.885164 74 7 0.344017 42 3 0.5356277 90 4 0.5220276 70 4 0.940476 62 5 0.628401 106 4 0.2479425 186 7 0.648754 167 7 0.857606 138 5 0.0186541 248 7 0.0353741 66 5 0.2600000 128 4 0.011905 101 6 0.051651 118 7 0.0189255 165 7 0.488889 169 6 0.2900000 57 4 0.4667587 224 6 0.2543103 80 4 0.422316 126 6 0.7966176 0.684838 0.6421369 0.756043 0.6981420 0.764085 0.748863 0.5563380 0.6911953 0.7450918 0.8708288 0.610664 0.2277016 NA 0.7254939 0.6060628 0.483568 0.538968 0.8120034 0.7642522 0.900580 0.718632 0.727092 0.9072130 0.6205182 0.5949637 0.826988 0.947183 0.728286 0.4191044 0.7796770 0.8391367 0.0350548 0.03755869 0.14084507 0.00000000 0.057052 0.0054171 0.4851330 0.225352 0.3158581 0.2779435 0.4815712 1 0.709565 0.6634866 0.03501046 5 0.7420359 0.6062567 0.13577916 0.0552951 9.8427e-01 insignificant 1.00000 1.0000e+00 insignificant 0.7356217 6.5717e-01 insignificant 1.00000 1.0000e+00 insignificant 0.02718684 0.7381927 lowCoverage 1.00000 lowCoverage 0.709733 0.0326877 6.8358e-01 5 0.7706985 0.0272196 0.74347898 6.9637e-34 1.0000e+00 hypermethylated 1.6195e-32 1.0000e+00 hypermethylated 3.0955e-12 1.0000e+00 hypermethylated 8.8442e-11 1.0000e+00 hypermethylated 0.58862859 1.1630e-08 lowCoverage 4.1537e-07 lowCoverage 0.709228 0.3993902 0.31155462 4 0.7051838 0.4245081 0.2806757 1.3849e-08 1.0000e+00 lowCoverage 4.4674e-07 1.0000e+00 lowCoverage 2.8291e-05 1.0000e+00 lowCoverage 8.5731e-04 1.0000e+00 lowCoverage 0.27025874 1.2761e-03 lowCoverage 5.1044e-02 lowCoverage 0.6634866 0.0327273 0.6353198 7 0.6062567 0.0306220 0.5756347 1.2102e-21 1.0000e+00 hypermethylated 2.2003e-20 1.0000e+00 hypermethylated 3.0456e-11 1.0000e+00 hypermethylated 1.0152e-09 1.0000e+00 hypermethylated 0.56144175 2.6400e-06 hypermethylated 6.7693e-05 hypermethylated 0.6637706 0.3993902 0.26168929 6 0.6214362 0.4245081 0.19692812 1.4140e-04 9.9930e-01 hypermethylated 2.0200e-03 1.0000e+00 hypermethylated 4.7828e-04 9.9990e-01 hypermethylated 1.2264e-02 1.0000000 hypermethylated 2.4307e-01 1.0593e-02 weaklyHypermeth 0.30102133 insignificant 0.0327670 0.3993902 -0.3724889 6 0.0349966 0.4245081 -0.3895115 1.0000e+00 2.0056e-16 hypomethylated 1.0000e+00 6.2675e-15 hypomethylated 1.0000e+00 6.1003e-07 hypomethylated 1.0000e+00 1.8083e-05 hypomethylated -0.3183698 7.6953e-04 hypomethylated 1.4166e-02 hypomethylated chr16 84911950 84912950 49451 ENSG00000199949 0.788668 1239 18 0.784589 787 15 0.739709 285 15 0.816094 891 18 0.7750848 255 15 0.830760 1220 15 0.773093 443 14 0.881863 484 14 0.6655367 370 15 0.808740 313 13 0.779059 820 15 0.803811 191 9 0.7800857 401 14 0.7929525 259 15 0.7696877 398 14 0.6831085 187 12 0.824192 286 12 0.775233 1303 18 0.763278 1013 14 0.7399190 884 15 0.727483 197 13 0.949984 161 9 0.744986 651 18 0.865144 265 13 0.766457 161 11 0.7920287 882 15 0.8423765 266 14 0.747230 193 9 0.731584 761 14 0.8026637 870 15 0.890210 793 15 0.812196 964 15 0.6397312 586 15 0.6627236 408 14 0.5401124 618 15 0.804428 75 3 0.711406 560 13 0.7163754 990 16 0.793688 1172 18 0.8462743 996 18 0.7968920 1625 18 0.8185466 1508 16 0.805474 1042 18 0.8507614 0.859332 0.8084580 0.885251 0.8309902 0.845411 0.860926 0.8795237 0.7833953 0.8743449 0.8642107 0.830557 0.8923926 0.832731 0.8723922 0.8176087 0.859260 0.848947 0.8903890 0.8658096 0.808657 0.941861 0.849941 0.9234776 0.9006167 0.8656044 0.880815 0.799580 0.856400 0.8914447 0.9153432 0.8553936 0.7260154 0.64526601 0.49208504 0.81665087 0.726066 0.6895965 0.9010657 0.890924 0.8855333 0.8958438 0.8876585 11 0.861645 0.8815127 -0.01432727 15 0.7691206 0.7789951 -0.00987447 0.9657704 1.2177e-01 insignificant 1.00000 9.2952e-01 insignificant 0.9862846 7.6950e-03 weaklyHypometh 1.00000 3.4609e-01 insignificant -0.02725531 0.2480094 insignificant 1.00000 insignificant 0.861656 0.5959222 2.7553e-01 15 0.7796152 0.6429042 0.13671099 4.8049e-18 9.9705e-01 hypermethylated 5.8596e-17 1.0000e+00 hypermethylated 3.3606e-04 9.9672e-01 hypermethylated 2.4710e-03 1.0000e+00 hypermethylated 0.09964375 3.9106e-02 weaklyHypermeth 2.1970e-01 insignificant 0.861668 0.9054075 -0.02769321 18 0.7891971 0.8095494 -0.0203523 9.9663e-01 7.3589e-04 weaklyHypometh 1.0000e+00 3.7200e-02 weaklyHypometh 9.6903e-01 9.2161e-04 weaklyHypometh 1.0000e+00 7.0893e-02 weaklyHypometh -0.03340178 3.4372e-02 weaklyHypometh 4.1917e-01 insignificant 0.8815127 0.5957973 0.2867257 15 0.7789951 0.6258996 0.1530955 5.5762e-12 9.9974e-01 hypermethylated 5.9322e-11 1.0000e+00 hypermethylated 1.0021e-04 1.0000e+00 hypermethylated 9.3659e-04 1.0000e+00 hypermethylated 0.12689906 1.4981e-02 weaklyHypermeth 1.0083e-01 insignificant 0.8815127 0.9053777 -0.01423277 15 0.7789951 0.7914113 -0.01241617 5.7681e-01 1.6453e-02 weaklyHypometh 1.0000e+00 4.5703e-01 insignificant 2.5276e-01 7.6544e-02 insignificant 1.0000e+00 1.0000000 insignificant -6.1465e-03 7.8629e-01 insignificant 1.00000000 insignificant 0.5959222 0.9053926 -0.3059774 15 0.6429042 0.8008926 -0.1579884 9.9540e-01 5.6402e-07 hypomethylated 1.0000e+00 6.1980e-06 hypomethylated 9.9892e-01 1.9779e-03 weaklyHypometh 1.0000e+00 1.7504e-02 weaklyHypometh -0.1330455 1.3126e-02 weaklyHypometh 9.4432e-02 weaklyHypometh chr16 85222650 85223650 49463 FOXL1 ENSG00000176678 0.926730 349 5 0.716387 236 5 0.637208 77 5 0.947866 378 5 0.9500000 41 2 0.930845 410 5 0.939153 56 4 0.904850 218 5 0.7663683 137 5 0.933020 116 5 0.889154 161 5 0.714015 30 2 0.8823330 320 5 0.9465686 107 5 0.9051383 145 5 0.6000000 35 4 0.627958 34 4 0.786735 444 5 0.759988 169 5 0.8255982 285 5 0.851852 38 3 0.634041 143 5 0.965955 185 5 0.631499 107 5 0.942992 128 5 0.8926098 277 5 0.7753221 97 5 0.797222 41 5 0.923008 192 5 0.7867573 295 5 0.948022 270 5 0.949248 266 5 0.6906237 231 5 0.9454127 120 5 1.0000000 41 2 0.900000 42 3 0.760566 92 5 0.9668653 269 5 0.892783 222 5 0.8995100 253 5 0.8712480 443 5 0.9136133 356 5 0.770985 269 5 0.9201284 0.868728 0.6629005 0.955741 0.9357542 0.939747 0.926842 0.9180323 0.8011135 0.9389659 0.8512879 0.825102 0.9018215 0.950282 0.9171716 0.6536313 0.735713 0.917301 0.9256899 0.8598466 1.000000 0.899268 0.953236 0.7975552 0.9571735 0.9150374 0.798006 0.865922 0.926610 0.9460502 0.9450136 0.9642729 0.8579130 0.96224225 0.98675290 0.95530726 0.940428 0.9714792 0.9036592 0.901312 0.8864482 0.9426185 0.9114234 3 0.893010 0.9114173 -0.02111894 5 0.7582224 0.7681317 -0.00990933 0.8561714 1.0082e-01 insignificant 1.00000 8.3380e-01 insignificant 0.8480374 6.5305e-02 insignificant 1.00000 9.1978e-01 insignificant -0.01204824 0.7835706 lowCoverage 1.00000 lowCoverage 0.893373 0.9245283 -3.1263e-02 5 0.7734817 0.8042815 -0.03079985 9.6146e-01 1.1272e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9414e-01 5.5817e-03 weaklyHypometh 1.0000e+00 1.5505e-01 insignificant -0.04774884 4.2769e-01 lowCoverage 1.0000e+00 lowCoverage 0.894300 0.9098573 -0.01344490 5 0.8881780 0.9019219 -0.0137439 8.5395e-01 4.2777e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.9505e-01 2.7039e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04013202 2.9567e-01 lowCoverage 1.0000e+00 lowCoverage 0.9131722 0.9245283 -0.0073666 5 0.8628203 0.8042815 0.0585388 6.3176e-01 5.4342e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4908e-01 1.0985e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03570060 5.7209e-01 lowCoverage 1.0000e+00 lowCoverage 0.9157164 0.9092677 0.00888558 5 0.9253203 0.7516016 0.17371875 4.7155e-01 8.7897e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.3272e-01 9.7746e-01 insignificant 9.4802e-01 1.0000000 insignificant -2.8084e-02 5.2142e-01 lowCoverage 1.00000000 lowCoverage 0.9279393 0.9098573 0.0190451 5 0.9151378 0.9019219 0.0132159 7.7923e-02 8.4990e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.0739e-02 9.9212e-01 weaklyHypermeth 2.9257e-01 1.0000e+00 insignificant 0.0076168 8.9672e-01 lowCoverage 1.0000e+00 lowCoverage chr16 85331550 85332550 49465 FOXL1 ENSG00000176678 0.789648 100 2 0.505489 98 5 0.654076 45 2 0.149756 67 2 0.6984848 25 2 0.620700 105 5 0.544872 59 2 0.581732 68 5 0.5990338 51 2 0.198997 50 2 0.729118 115 5 0.780952 19 2 0.5107527 91 5 1.0000000 18 3 0.6961844 77 2 0.6666667 12 2 0.250000 41 2 0.588014 93 2 0.492593 58 5 0.5465449 128 5 0.344444 22 2 0.546368 98 5 0.715686 76 2 0.640523 55 5 0.634266 36 2 0.6278687 134 5 0.6779832 63 5 0.027778 17 2 0.427214 58 5 0.4769841 125 5 0.641018 138 5 0.705252 133 5 0.5339394 89 5 0.4500000 45 3 0.6134680 172 5 0.000000 41 2 0.445238 44 5 0.5043478 130 5 0.281662 171 2 0.5047368 149 2 0.6952381 183 5 0.4275974 158 2 0.713354 122 2 0.4874934 0.146634 0.3169415 0.372082 0.1054968 0.475553 0.403846 0.3060170 0.3090664 0.3183823 0.3252049 0.446290 0.0468867 0.308015 0.2467556 0.6692353 0.380960 0.227982 0.0480620 0.1932518 0.675711 0.092303 0.315777 0.2698358 0.3404619 0.2112450 0.261165 0.060724 0.094946 0.0784884 0.1586510 0.4947146 0.0298450 0.01162791 0.04455407 0.01132457 0.050664 0.0101112 0.2789388 0.266432 0.2469546 0.1444314 0.2909310 2 0.446212 0.4722513 0.04293867 5 0.5880833 0.5934120 -0.00532874 0.3359746 8.1578e-01 insignificant 1.00000 1.0000e+00 insignificant 0.0218770 9.0888e-01 weaklyHypermeth 1.00000 1.0000e+00 insignificant 0.04139864 0.5761563 lowCoverage 1.00000 lowCoverage 0.446212 0.4318618 1.9929e-01 5 0.5880833 0.4631731 0.12491019 2.5483e-05 8.9709e-01 weaklyHypermeth 1.4079e-04 1.0000e+00 weaklyHypermeth 9.7850e-06 9.9069e-01 weaklyHypermeth 9.8839e-05 1.0000e+00 weaklyHypermeth 0.15568183 1.5727e-01 lowCoverage 6.4988e-01 lowCoverage 0.448964 0.2630907 0.04214889 2 0.6586411 0.6731688 -0.0145277 5.2845e-01 2.7483e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 6.6619e-01 3.0218e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.05566299 5.7116e-01 lowCoverage 1.0000e+00 lowCoverage 0.4722513 0.4318618 0.1252260 5 0.5934120 0.4631731 0.1302389 3.1297e-03 7.6495e-01 weaklyHypermeth 1.4507e-02 1.0000e+00 weaklyHypermeth 1.7043e-04 6.0713e-01 weaklyHypermeth 1.5217e-03 1.0000e+00 weaklyHypermeth 0.11428319 3.0563e-01 lowCoverage 1.0000e+00 lowCoverage 0.4725159 0.2630907 -0.00714120 2 0.6232055 0.6731688 -0.04996325 8.6691e-01 1.2834e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.6325e-01 1.0431e-02 lowCoverage 1.0000e+00 0.5215262 lowCoverage 1.4264e-02 8.8974e-01 lowCoverage 1.00000000 lowCoverage 0.4343629 0.2630907 -0.2010562 2 0.5558077 0.6731688 -0.1173611 9.9722e-01 1.1357e-07 lowCoverage 1.0000e+00 1.3361e-06 lowCoverage 9.9986e-01 1.7938e-04 lowCoverage 1.0000e+00 2.3297e-03 lowCoverage -0.1000188 4.2805e-01 lowCoverage 1.0000e+00 lowCoverage chr16 85352150 85353150 49467 FOXL1 ENSG00000176678 0.789576 285 6 0.566107 98 6 0.297204 136 8 0.250200 179 8 0.5031250 41 4 0.717067 270 8 0.604113 102 8 0.630103 88 6 0.2693066 110 6 0.297211 107 5 0.437441 199 6 0.368384 72 6 0.5691102 118 6 NA 0 0 0.6162704 146 6 0.4736111 41 4 0.672024 54 8 0.372318 219 5 0.599439 111 7 0.4505216 246 8 0.488722 61 4 0.439994 80 5 0.379554 183 7 0.276706 90 7 0.407357 56 5 0.3330008 197 8 0.3992548 131 8 0.378125 45 7 0.432764 104 6 0.6695952 238 9 0.295867 226 7 0.471356 349 8 0.0078125 128 8 0.0000000 126 6 0.0027100 224 7 0.000000 112 6 0.044271 48 5 0.0000000 195 6 0.554081 199 6 0.5833859 331 9 0.4100664 380 6 0.2865682 304 6 0.398650 186 8 0.7552001 0.597133 0.2824675 0.414625 0.5567680 0.678568 0.766297 0.6353280 0.3777216 0.4332148 0.5124831 0.524908 0.6642366 NA 0.7262248 0.6367096 0.673014 0.458783 0.5256977 0.5845382 0.606862 0.565319 0.590878 0.3354765 0.4233130 0.3474399 0.514221 0.525631 0.468459 0.7360810 0.3733874 0.4399422 0.0141575 0.00000000 0.01091160 0.00000000 0.064687 0.0000000 0.5679081 0.574650 0.3134076 0.3776937 0.5843079 4 0.492372 0.4125000 0.08293357 6 0.5340859 0.4913316 0.04275434 0.0091513 9.8810e-01 weaklyHypermeth 1.00000 1.0000e+00 insignificant 0.0019660 9.9989e-01 weaklyHypermeth 0.98299 1.0000e+00 insignificant 0.08475429 0.0832824 insignificant 1.00000 insignificant 0.491791 0.0072029 5.0681e-01 6 0.4409031 0.0041869 0.43671625 6.2212e-38 1.0000e+00 hypermethylated 1.6372e-36 1.0000e+00 hypermethylated 3.1017e-17 1.0000e+00 hypermethylated 2.3859e-15 1.0000e+00 hypermethylated 0.48997993 4.5727e-11 hypermethylated 2.4067e-09 hypermethylated 0.492372 0.3757143 0.11732700 6 0.5340859 0.5259711 0.0081148 1.2336e-02 9.8318e-01 weaklyHypermeth 1.2214e-01 1.0000e+00 insignificant 1.8943e-01 9.9608e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.05256184 4.4674e-01 insignificant 1.0000e+00 insignificant 0.4120660 0.0072029 0.4333398 7 0.4395979 0.0041869 0.4354110 1.6287e-28 1.0000e+00 hypermethylated 4.2862e-27 1.0000e+00 hypermethylated 7.6044e-15 1.0000e+00 hypermethylated 5.8495e-13 1.0000e+00 hypermethylated 0.40522564 1.3444e-08 hypermethylated 6.7222e-07 hypermethylated 0.4125000 0.3757143 0.03615882 6 0.4913316 0.5259711 -0.03463953 6.0177e-01 8.6810e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6682e-01 7.0847e-01 insignificant 1.0000e+00 1.0000000 insignificant -3.2192e-02 6.2161e-01 insignificant 1.00000000 insignificant 0.0072029 0.3743737 -0.4031230 6 0.0041869 0.4311653 -0.4269785 1.0000e+00 2.1870e-19 hypomethylated 1.0000e+00 8.1526e-18 hypomethylated 1.0000e+00 2.9348e-11 hypomethylated 1.0000e+00 2.9348e-09 hypomethylated -0.4374181 1.1757e-03 weaklyHypometh 1.7925e-02 weaklyHypometh chr16 85456850 85457850 49476 FOXL1 ENSG00000176678 0.896478 265 6 0.806400 182 6 0.865229 168 6 0.916687 266 7 0.6930542 89 6 0.786667 414 7 0.862517 162 6 0.898141 212 7 0.8924083 282 5 0.959212 142 5 0.937127 235 7 0.852160 121 5 0.9443902 195 5 0.9060837 178 6 0.8640770 271 7 0.9382282 148 5 0.860000 21 1 0.793862 365 7 0.938891 239 7 0.9218325 260 7 1.000000 40 6 0.909664 105 5 0.816343 146 6 0.942829 152 7 0.938477 206 7 0.9166698 269 7 0.8595753 102 7 0.836905 115 7 0.851353 191 7 0.8241816 263 7 0.927199 273 7 0.900695 240 7 0.0360195 287 6 0.0744898 75 7 0.2842105 270 4 0.107773 192 5 0.128883 240 7 0.1033630 309 7 0.930575 354 6 0.8983025 277 7 0.8500127 416 7 0.8415449 244 7 0.758494 248 7 0.9144160 0.778796 0.8354608 0.916383 0.8621999 0.891127 0.866199 0.8999661 0.8629696 0.9476737 0.9349534 0.946586 0.9192284 0.933440 0.8523469 0.9434751 0.884946 0.808730 0.9482981 0.8928834 1.000000 0.876323 0.836764 0.9496296 0.9234183 0.9208815 0.835505 0.951922 0.824410 0.9345125 0.9287275 0.9139840 0.0284324 0.09169535 0.32191291 0.10981155 0.159000 0.1155801 0.9013738 0.901985 0.8723876 0.8826552 0.7880162 5 0.887782 0.9067555 -0.01826029 7 0.7788187 0.8573128 -0.07849404 0.9705928 6.0528e-02 insignificant 1.00000 6.9294e-01 insignificant 0.9726057 9.6164e-02 insignificant 1.00000 9.7997e-01 insignificant -0.01698541 0.4459519 insignificant 1.00000 insignificant 0.887782 0.1048798 7.8139e-01 7 0.7788187 0.0860191 0.69279964 1.1257e-90 1.0000e+00 hypermethylated 1.6082e-88 1.0000e+00 hypermethylated 3.6058e-16 1.0000e+00 hypermethylated 2.2536e-14 1.0000e+00 hypermethylated 0.75421579 2.3762e-07 hypermethylated 7.0738e-06 hypermethylated 0.887782 0.8648473 0.02200143 7 0.7788187 0.8705015 -0.0916828 6.0062e-02 9.9661e-01 insignificant 4.5849e-01 1.0000e+00 insignificant 5.7680e-02 9.5423e-01 insignificant 5.2917e-01 1.0000e+00 insignificant 0.02088642 5.4668e-01 insignificant 1.0000e+00 insignificant 0.9067555 0.1048798 0.7989461 7 0.8573128 0.0860191 0.7712937 4.9957e-67 1.0000e+00 hypermethylated 6.2447e-65 1.0000e+00 hypermethylated 3.8435e-14 1.0000e+00 hypermethylated 2.2609e-12 1.0000e+00 hypermethylated 0.77120119 1.3254e-07 hypermethylated 4.7337e-06 hypermethylated 0.9067555 0.8648473 0.04644894 7 0.8573128 0.8705015 -0.01318876 4.8401e-04 9.8914e-01 weaklyHypermeth 6.2858e-03 1.0000e+00 weaklyHypermeth 2.3717e-03 9.9693e-01 weaklyHypermeth 4.5609e-02 1.0000000 weaklyHypermeth 3.7872e-02 2.9674e-01 insignificant 1.00000000 insignificant 0.1048798 0.8648473 -0.7526850 7 0.0860191 0.8705015 -0.7844824 1.0000e+00 3.4504e-34 hypomethylated 1.0000e+00 4.9291e-32 hypomethylated 1.0000e+00 2.7740e-09 hypomethylated 1.0000e+00 1.7338e-07 hypomethylated -0.7333294 6.3751e-08 hypomethylated 2.1250e-05 hypomethylated chr16 85519750 85520750 49482 FOXL1 ENSG00000176678 0.862749 1159 27 0.578229 1029 25 0.612939 472 23 0.846440 742 26 0.7628836 307 15 0.873556 1240 27 0.766708 526 19 0.799536 638 26 0.7933367 461 22 0.868762 376 23 0.773559 1038 26 0.614927 246 19 0.6129940 651 25 0.8144278 233 14 0.6629537 687 25 0.5723771 149 8 0.661915 79 3 0.624904 1017 25 0.814196 972 27 0.8001762 1000 27 0.607733 249 19 0.605736 257 17 0.754251 700 22 0.735258 403 24 0.782548 217 16 0.8019854 1145 29 0.7227998 510 24 0.647539 246 13 0.821425 711 20 0.7096969 1273 26 0.865592 1318 24 0.911627 1172 27 0.6787987 695 25 0.4600503 715 26 0.4363527 1419 22 0.734152 250 18 0.387066 795 27 0.8016721 1134 24 0.731211 959 26 0.7383179 995 27 0.7853531 1023 23 0.5584662 1160 26 0.680362 700 27 0.9045593 0.662761 0.5834993 0.865542 0.8208923 0.889760 0.756495 0.8030608 0.7735001 0.9146938 0.8384422 0.661750 0.6336207 0.796796 0.7651807 0.7306269 0.748757 0.567296 0.8901742 0.8236645 0.731441 0.602399 0.866866 0.7990142 0.7842840 0.8247144 0.806243 0.883801 0.848695 0.7352221 0.9246037 0.9217417 0.6408934 0.39253715 0.33326797 0.53014150 0.276066 0.7788083 0.8441701 0.719772 0.7689320 0.6201884 0.6918226 12 0.782575 0.8371355 -0.05569277 26 0.7412587 0.7437614 -0.00250276 0.9999999 1.7458e-03 weaklyHypometh 1.00000 8.6260e-02 weaklyHypometh 0.9999958 3.9174e-02 weaklyHypometh 1.00000 7.2249e-01 insignificant -0.01130414 0.7593319 insignificant 1.00000 insignificant 0.782532 0.5142800 2.6231e-01 26 0.7282177 0.5662215 0.16199616 1.3026e-20 9.9984e-01 hypermethylated 1.8091e-19 1.0000e+00 hypermethylated 1.2830e-08 9.9496e-01 hypermethylated 2.2910e-07 1.0000e+00 hypermethylated 0.15286313 8.8804e-02 insignificant 4.1778e-01 insignificant 0.782549 0.7205791 0.05507275 26 0.7391867 0.6686954 0.0704912 3.1963e-03 9.9593e-01 weaklyHypermeth 3.7603e-02 1.0000e+00 weaklyHypermeth 2.6620e-02 9.9936e-01 weaklyHypermeth 2.8613e-01 1.0000e+00 insignificant 0.03713646 4.3949e-01 insignificant 1.0000e+00 insignificant 0.8371979 0.5144971 0.3199103 27 0.7389995 0.5795294 0.1594701 7.5244e-24 9.9998e-01 hypermethylated 1.4754e-22 1.0000e+00 hypermethylated 1.9115e-10 9.9987e-01 hypermethylated 5.6221e-09 1.0000e+00 hypermethylated 0.16416727 7.3317e-02 insignificant 3.4178e-01 insignificant 0.8368492 0.7204301 0.11451866 27 0.7125671 0.6506226 0.06194454 7.0587e-10 1.0000e+00 weaklyHypermeth 3.7151e-08 1.0000e+00 weaklyHypermeth 9.4788e-04 1.0000e+00 weaklyHypermeth 2.1064e-02 1.0000000 weaklyHypermeth 4.8441e-02 3.3904e-01 insignificant 1.00000000 insignificant 0.5142914 0.7207282 -0.2047538 27 0.5634314 0.6686954 -0.1052641 9.8463e-01 1.6723e-04 hypomethylated 1.0000e+00 1.2296e-03 hypomethylated 9.8866e-01 2.4578e-02 weaklyHypometh 1.0000e+00 1.4126e-01 insignificant -0.1157267 1.9640e-01 insignificant 7.2071e-01 insignificant chr16 85522250 85523250 49483 FOXL1 ENSG00000176678 0.749302 599 18 0.557958 464 20 0.584852 310 14 0.878025 499 15 0.5376735 171 13 0.874402 614 18 0.709601 276 18 0.673104 339 18 0.6539944 277 12 0.734231 254 15 0.824173 470 19 0.568662 140 9 0.4952259 436 18 0.8886304 159 10 0.6323791 252 15 0.6521008 97 9 0.636201 96 9 0.541842 804 18 0.633708 427 17 0.5751863 565 18 0.845528 184 12 0.525691 280 15 0.826544 316 14 0.785072 170 13 0.840506 379 13 0.7618181 495 19 0.5247571 266 17 0.685447 159 9 0.676321 408 18 0.7412413 530 19 0.690796 520 19 0.872455 537 18 0.2072821 523 19 0.2271767 373 18 0.1289593 662 15 0.248248 245 14 0.146810 419 17 0.3193739 642 19 0.679822 516 17 0.6050492 544 19 0.7066634 516 17 0.6396801 553 17 0.659855 477 16 0.7407624 0.558982 0.5844686 0.842542 0.6423562 0.824047 0.727092 0.7083342 0.6339773 0.7162581 0.8169285 0.657780 0.3770325 0.758186 0.6175242 0.6737011 0.655777 0.441318 0.7122900 0.5628659 0.805785 0.410016 0.827732 0.7408559 0.7604439 0.7050536 0.535978 0.701605 0.650396 0.6737660 0.6618577 0.8826994 0.0764704 0.07483292 0.07994431 0.10179741 0.058551 0.0922515 0.6302997 0.605110 0.6473064 0.5485440 0.6354228 6 0.667496 0.7095328 -0.04231645 18 0.6528039 0.7196599 -0.06685598 0.9999753 1.0778e-03 weaklyHypometh 1.00000 6.3401e-02 weaklyHypometh 0.9995128 6.3847e-02 insignificant 1.00000 9.1315e-01 insignificant -0.06128536 0.1683331 insignificant 1.00000 insignificant 0.667173 0.1634649 5.0335e-01 18 0.6020793 0.1997003 0.40237894 1.9361e-68 1.0000e+00 hypermethylated 1.7601e-66 1.0000e+00 hypermethylated 5.1404e-27 1.0000e+00 hypermethylated 1.2851e-24 1.0000e+00 hypermethylated 0.45708762 6.9103e-09 hypermethylated 2.5594e-07 hypermethylated 0.667588 0.6070606 0.04812240 17 0.6757245 0.6471775 0.0285470 4.6683e-02 5.0155e-01 weaklyHypermeth 3.7346e-01 1.0000e+00 insignificant 2.3155e-02 8.7466e-01 weaklyHypermeth 2.6312e-01 1.0000e+00 insignificant 0.01184878 7.1532e-01 insignificant 1.0000e+00 insignificant 0.7098299 0.1636364 0.5482509 18 0.7523717 0.2087776 0.5435941 2.3809e-77 1.0000e+00 hypermethylated 3.4012e-75 1.0000e+00 hypermethylated 4.2183e-26 1.0000e+00 hypermethylated 1.4061e-23 1.0000e+00 hypermethylated 0.51837299 4.7485e-09 hypermethylated 2.7937e-07 hypermethylated 0.7096545 0.6070606 0.09258251 17 0.7376089 0.6471775 0.09043142 3.0555e-06 9.9292e-01 weaklyHypermeth 7.2750e-05 1.0000e+00 weaklyHypermeth 4.0022e-04 9.7615e-01 weaklyHypermeth 1.1122e-02 1.0000000 weaklyHypermeth 7.3134e-02 7.2775e-02 insignificant 0.72839801 insignificant 0.1637509 0.6070606 -0.4452402 17 0.2296554 0.6471775 -0.4175221 1.0000e+00 7.4998e-52 hypomethylated 1.0000e+00 2.4999e-49 hypomethylated 1.0000e+00 4.5474e-17 hypomethylated 1.0000e+00 1.5158e-14 hypomethylated -0.4452388 9.1392e-07 hypomethylated 1.9256e-04 hypomethylated chr16 85643450 85644450 49490 FOXL1 ENSG00000176678 0.274392 118 5 0.031406 145 5 0.268519 128 8 0.215575 106 5 0.4213707 63 4 0.199725 238 8 0.315459 120 8 0.486700 181 8 0.0968921 145 8 0.169655 207 8 0.273921 219 8 0.145139 54 5 0.1920058 120 5 0.1367328 157 5 0.0369674 257 8 0.5896359 40 2 NA 0 0 0.324915 130 5 0.395813 291 8 0.0495082 204 8 0.389385 100 8 0.155556 39 2 0.317416 118 8 0.131250 41 2 0.243956 30 2 0.1068379 239 8 0.2700534 251 8 0.180952 62 6 0.252860 176 8 0.0771646 233 8 0.240585 239 8 0.269460 199 8 0.3266815 95 8 0.0376603 192 8 0.2093596 96 3 0.333333 6 0 0.065190 102 8 0.0318283 315 8 0.278259 149 8 0.3665633 117 8 0.1955044 106 8 0.1106227 99 8 0.202274 99 8 0.2934864 0.066458 0.3149351 0.148035 0.2829507 0.178321 0.111994 0.5440708 0.1282105 0.1487875 0.1476530 0.145668 0.2644218 0.237150 0.0695190 0.5247400 NA 0.176740 0.2508648 0.0706167 0.368717 0.228794 0.258095 0.2071429 0.1539470 0.1392300 0.191914 0.030471 0.258260 0.1513458 0.2043591 0.2908862 0.2816655 0.02420635 0.12608521 0.09813387 0.084652 0.0265836 0.1516831 0.305183 0.2750992 0.0917190 0.0658922 2 0.204242 0.2020845 -0.00547091 8 0.3274031 0.3254479 0.00195522 0.9299261 7.3899e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9806919 6.9546e-01 insignificant 1.00000 1.0000e+00 insignificant 0.02376282 0.5940930 insignificant 1.00000 insignificant 0.203221 0.1265509 9.3014e-02 8 0.2430814 0.0916262 0.15145519 1.6473e-02 9.8463e-01 weaklyHypermeth 6.6962e-02 1.0000e+00 weaklyHypermeth 4.4439e-03 9.8987e-01 weaklyHypermeth 2.7263e-02 1.0000e+00 weaklyHypermeth 0.07604369 2.9059e-01 insignificant 1.0000e+00 insignificant 0.202953 0.1947368 0.00894142 8 0.2166976 0.2428347 -0.0261371 5.2529e-01 4.5898e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.5234e-01 5.0942e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01274114 8.2374e-01 insignificant 1.0000e+00 insignificant 0.2011594 0.1265509 0.0780638 8 0.2130225 0.0916262 0.1213963 1.7648e-03 9.3516e-01 weaklyHypermeth 8.5256e-03 1.0000e+00 weaklyHypermeth 4.3300e-02 9.9757e-01 weaklyHypermeth 2.0046e-01 1.0000e+00 insignificant 0.05228087 4.3736e-01 insignificant 1.0000e+00 insignificant 0.2013929 0.1947368 0.01203024 8 0.2556270 0.2428347 0.01279227 2.5676e-01 4.1657e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.0939e-01 7.6699e-01 insignificant 1.0000e+00 1.0000000 insignificant -1.1022e-02 8.3348e-01 insignificant 1.00000000 insignificant 0.1268657 0.1947368 -0.0829421 8 0.1099514 0.2428347 -0.1328833 9.3122e-01 2.4218e-02 weaklyHypometh 1.0000e+00 1.0909e-01 insignificant 9.6092e-01 5.2305e-02 insignificant 1.0000e+00 2.7101e-01 insignificant -0.0633025 4.0368e-01 insignificant 1.0000e+00 insignificant chr16 85972250 85973250 49504 ENSG00000131152 0.636468 158 3 0.882491 230 3 0.666667 74 3 0.802082 122 3 0.9027778 57 3 0.932346 330 5 0.912881 117 3 0.891026 114 3 0.8370370 69 3 0.888889 31 2 0.941191 181 3 0.750000 12 0 0.9705882 72 2 0.8177388 40 2 0.9268293 87 3 1.0000000 16 2 1.000000 4 0 0.891138 183 3 0.838974 290 5 0.8974645 230 5 0.822727 25 2 1.000000 2 0 0.932913 105 5 0.869048 27 3 1.000000 9 0 0.8718875 314 5 0.8555268 94 3 0.883838 31 3 0.936121 180 3 0.9036590 343 5 0.835310 341 5 0.682718 231 5 0.2915088 140 3 0.2718379 114 3 0.5069442 288 5 1.000000 2 0 0.133670 144 3 0.7763397 308 5 0.577176 160 5 0.6703894 138 3 0.8380952 85 3 0.7867235 176 4 0.835478 117 5 0.8640126 0.855328 0.7244898 0.964539 0.8690476 0.934246 0.882657 0.8532182 0.8575964 0.8503401 0.9346653 0.663265 0.9603842 0.870152 0.9014435 1.0000000 NA 0.865546 0.9308623 0.9279303 0.847959 0.991951 0.947556 0.8236152 1.0000000 0.9291078 0.882501 0.843537 0.913959 0.9444561 0.9052496 0.9724956 0.1257685 0.09630771 0.43603252 NA 0.046607 0.7872155 0.8923293 0.915879 0.9358601 0.8803996 0.9579504 0 0.888199 0.9041176 -0.02442558 5 0.8128944 0.6718960 0.14099838 0.4828055 3.7572e-01 insignificant 1.00000 1.0000e+00 insignificant 0.8780286 5.8146e-01 insignificant 1.00000 1.0000e+00 insignificant -0.01348286 0.6854805 lowCoverage 1.00000 lowCoverage 0.888751 0.4267068 4.8265e-01 5 0.8672977 0.5224811 0.34481662 6.9915e-14 1.0000e+00 hypermethylated 6.9223e-13 1.0000e+00 hypermethylated 6.0406e-05 9.9817e-01 hypermethylated 5.1629e-04 1.0000e+00 hypermethylated 0.37261281 4.0502e-02 lowCoverage 2.2627e-01 lowCoverage 0.888797 0.8827893 0.00725589 3 0.8894148 0.6684486 0.2209661 6.3510e-02 7.2272e-01 lowCoverage 4.6698e-01 1.0000e+00 lowCoverage 2.8333e-01 3.0515e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.12775723 6.4717e-02 lowCoverage 5.8833e-01 lowCoverage 0.9051267 0.4267068 0.4779282 5 0.8750337 0.5224811 0.3525525 1.0647e-10 1.0000e+00 hypermethylated 1.0140e-09 1.0000e+00 hypermethylated 5.8206e-05 9.9952e-01 hypermethylated 5.5967e-04 1.0000e+00 hypermethylated 0.38609566 3.5826e-02 lowCoverage 2.0241e-01 lowCoverage 0.9052384 0.8827893 0.03421989 3 0.8958614 0.6684486 0.22741275 3.8466e-03 6.1303e-02 lowCoverage 4.0069e-02 9.5786e-01 lowCoverage 1.6165e-01 4.3464e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 1.4124e-01 4.7519e-02 lowCoverage 0.57251394 lowCoverage 0.4267068 0.8841010 -0.4779424 3 0.5224811 0.8021384 -0.2796572 8.9759e-01 9.4958e-06 lowCoverage 1.0000e+00 8.4034e-05 lowCoverage 7.3309e-01 7.3301e-04 lowCoverage 1.0000e+00 7.7980e-03 lowCoverage -0.2448556 1.4048e-01 lowCoverage 5.6874e-01 lowCoverage chr16 85978550 85979550 49505 FBXO31 ENSG00000103264 0.724065 394 6 0.691851 506 6 0.615072 332 6 0.821541 394 6 0.6261702 284 6 0.715550 527 6 0.677780 314 7 0.577166 351 7 0.6165645 344 7 0.563504 280 6 0.599644 436 6 0.461157 297 6 0.6284871 442 6 0.6096271 290 6 0.5300070 366 6 0.5451596 208 6 0.698786 873 4 0.844043 468 6 0.537942 400 6 0.6754262 334 6 0.691961 106 6 0.665954 203 6 0.706838 294 6 0.622579 154 7 0.627499 119 6 0.6579386 404 6 0.5880684 331 7 0.623027 222 7 0.613770 360 6 0.7362484 585 6 0.718238 377 6 0.592920 409 6 0.6390890 376 6 0.5889651 189 6 0.3657204 410 6 0.520563 46 4 0.561871 373 7 0.7036669 413 6 0.675280 348 6 0.7573956 301 6 0.8419858 416 6 0.7206487 266 6 0.837634 324 6 0.7563992 0.625820 0.7121082 0.797611 0.6348918 0.743866 0.685591 0.6027398 0.6741221 0.6101576 0.6522294 0.575464 0.6864777 0.712516 0.6947754 0.6433696 0.761998 0.840909 0.6260326 0.7650828 0.788315 0.734682 0.820326 0.7013692 0.7498280 0.7862958 0.731726 0.717978 0.630364 0.7424427 0.6634155 0.7242156 0.6726666 0.53669164 0.55265041 0.78611422 0.700165 0.7202995 0.8088364 0.766027 0.8266370 0.8291535 0.8114894 6 0.702551 0.7196970 -0.02030005 6 0.6372072 0.6254903 0.01171692 0.5089716 7.3358e-02 insignificant 1.00000 7.7219e-01 insignificant 0.9938270 1.2039e-02 weaklyHypometh 1.00000 4.1347e-01 insignificant -0.01577636 0.5455682 insignificant 1.00000 insignificant 0.702551 0.6225789 7.8604e-02 6 0.6372072 0.5344008 0.10280643 6.7810e-04 9.9480e-01 weaklyHypermeth 3.3078e-03 1.0000e+00 weaklyHypermeth 2.6538e-02 8.2587e-01 weaklyHypermeth 1.3138e-01 1.0000e+00 insignificant 0.07466467 1.9206e-01 insignificant 7.5122e-01 insignificant 0.702551 0.8096677 -0.10540651 6 0.6372072 0.6976045 -0.0603972 9.8011e-01 5.2720e-06 weaklyHypometh 1.0000e+00 8.7866e-04 weaklyHypometh 9.9881e-01 8.2649e-09 weaklyHypometh 1.0000e+00 8.2649e-06 weaklyHypometh -0.12861154 1.1132e-02 weaklyHypometh 2.1003e-01 insignificant 0.7196970 0.6225789 0.0995628 6 0.6254903 0.5344008 0.0910895 2.9609e-04 9.9611e-01 weaklyHypermeth 1.6359e-03 1.0000e+00 weaklyHypermeth 4.2672e-03 9.7923e-01 weaklyHypermeth 2.5250e-02 1.0000e+00 weaklyHypermeth 0.09044104 1.1729e-01 insignificant 4.9699e-01 insignificant 0.7196970 0.8096677 -0.08512825 6 0.6254903 0.6976045 -0.07211416 9.9909e-01 2.4430e-05 weaklyHypometh 1.0000e+00 4.0717e-03 weaklyHypometh 9.9827e-01 4.2783e-04 weaklyHypometh 1.0000e+00 0.0713044 weaklyHypometh -1.1284e-01 2.1146e-02 weaklyHypometh 0.42084788 insignificant 0.6225789 0.8096677 -0.1818316 6 0.5344008 0.6976045 -0.1632037 9.9963e-01 2.9579e-07 weaklyHypometh 1.0000e+00 3.3612e-06 weaklyHypometh 9.9851e-01 1.4121e-04 weaklyHypometh 1.0000e+00 1.8580e-03 weaklyHypometh -0.2032762 6.9173e-03 weaklyHypometh 5.6699e-02 weaklyHypometh chr16 86056050 86057050 49509 ENSG00000218256 0.709524 51 3 0.803805 179 5 0.627514 191 5 0.957895 80 2 0.5151515 28 3 0.781746 53 4 0.277778 9 0 0.875000 16 2 0.3333333 3 0 1.000000 6 0 0.578431 69 2 0.444444 7 0 0.6666667 11 2 0.5000000 4 0 0.3888889 8 0 NA 0 0 NA 0 0 0.794444 24 3 0.666667 11 2 0.8076923 41 3 0.972222 20 2 1.000000 2 0 0.687897 62 5 0.666667 3 0 0.909962 56 2 0.7533081 190 5 0.5000000 4 0 0.000000 4 0 1.000000 2 0 0.7541931 165 5 0.768622 175 5 0.731005 49 4 0.1880212 233 5 0.1250000 32 2 0.1313283 275 5 0.772727 44 2 0.317323 58 2 0.5318681 198 5 0.770833 38 2 0.7656250 35 2 0.7605051 95 2 0.4000000 8 0 0.677419 62 2 0.9166667 0.739011 0.5000000 0.894737 0.7727273 0.966667 0.416667 0.8750000 0.5000000 1.0000000 0.8676471 0.666667 1.0000000 0.500000 0.5833333 NA NA 0.750000 1.0000000 0.9230769 0.944444 1.000000 0.900000 1.0000000 0.9099617 0.9800000 0.500000 NA 1.000000 0.8620690 0.9316817 0.8180147 0.5000000 0.12500000 0.33276044 0.77272727 0.475985 0.8653846 0.8125000 0.531250 0.6512626 0.0000000 0.6774194 0 0.792668 0.8784153 -0.08028245 4 0.6881573 0.7571215 -0.06896420 0.9982277 2.7606e-03 lowCoverage 1.00000 1.0876e-01 lowCoverage 0.9804808 1.7610e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage -0.07704628 0.4204364 lowCoverage 1.00000 lowCoverage 0.792668 0.2785714 5.0558e-01 4 0.6881573 0.2239664 0.46419096 1.8727e-15 1.0000e+00 lowCoverage 2.0355e-14 1.0000e+00 lowCoverage 2.2020e-05 1.0000e+00 lowCoverage 2.0774e-04 1.0000e+00 lowCoverage 0.30723196 3.2852e-02 lowCoverage 1.9439e-01 lowCoverage 0.792668 0.6596639 0.12796035 2 0.6881573 0.7404505 -0.0522932 8.6370e-02 2.8553e-04 lowCoverage 6.1255e-01 2.1613e-02 lowCoverage 3.5435e-01 7.3126e-02 lowCoverage 1.0000e+00 8.9545e-01 lowCoverage -0.02326652 7.9442e-01 lowCoverage 1.0000e+00 lowCoverage 0.8784153 0.2785714 0.6001820 5 0.7571215 0.2239664 0.5331552 8.3176e-19 9.9999e-01 hypermethylated 1.2602e-17 1.0000e+00 hypermethylated 5.2738e-06 1.0000e+00 hypermethylated 6.4315e-05 1.0000e+00 hypermethylated 0.38427824 1.4857e-02 lowCoverage 1.0083e-01 lowCoverage 0.8784153 0.6596639 0.20370858 2 0.7571215 0.7404505 0.01667104 1.0243e-04 5.2859e-04 lowCoverage 1.6258e-03 3.5473e-02 lowCoverage 3.2595e-02 2.7889e-02 lowCoverage 3.2595e-01 0.8155981 lowCoverage 5.3780e-02 6.2162e-01 lowCoverage 1.00000000 lowCoverage 0.2785714 0.6596639 -0.2064294 2 0.2239664 0.7404505 -0.5164841 9.9998e-01 5.4248e-10 lowCoverage 1.0000e+00 8.4763e-09 lowCoverage 9.9965e-01 5.3804e-03 lowCoverage 1.0000e+00 4.1388e-02 lowCoverage -0.3304985 3.0855e-02 lowCoverage 1.8360e-01 lowCoverage chr16 86108650 86109650 49514 ZCCHC14 ENSG00000140948 0.889016 509 10 0.744452 360 8 0.813877 278 10 0.888942 320 8 0.9059259 106 9 0.820823 464 10 0.837686 172 8 0.890713 318 9 0.8556121 250 8 0.919844 282 10 0.831585 400 10 0.872619 75 7 0.8743257 402 10 0.8784722 38 1 0.8379185 216 10 0.6526171 39 4 0.856047 80 8 0.843600 506 10 0.864369 285 10 0.9051104 436 10 0.882688 140 10 0.752256 125 6 0.859256 262 10 0.923771 117 6 0.885311 195 6 0.9053958 458 10 0.7251021 177 10 0.907828 102 8 0.863001 387 10 0.8757488 500 10 0.910682 386 10 0.902283 540 10 0.1259107 441 10 0.1201818 272 10 0.0168421 241 8 0.229105 229 10 0.181464 196 9 0.2107796 544 10 0.892094 297 10 0.8930571 425 10 0.8527250 382 9 0.8694740 331 10 0.859919 272 10 0.9017773 0.825075 0.8226242 0.875343 0.9000097 0.864276 0.816925 0.8754533 0.8404457 0.9056137 0.8828137 0.884439 0.8735608 0.895478 0.8913473 0.7130074 0.878097 0.871971 0.8860072 0.8938166 0.890512 0.802661 0.909573 0.8966744 0.8899813 0.8900457 0.783499 0.864121 0.872808 0.8577565 0.8754987 0.8992426 0.1210566 0.11645722 0.13823707 0.31591084 0.202784 0.2072899 0.8385446 0.889992 0.8501895 0.8443257 0.8328708 5 0.880780 0.8854782 -0.00641016 10 0.6954950 0.8514701 -0.15597507 0.9843450 7.8002e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9763788 7.2017e-01 insignificant 1.00000 1.0000e+00 insignificant -0.01693261 0.4637886 insignificant 1.00000 insignificant 0.881151 0.1705668 6.9188e-01 10 0.7769512 0.1408389 0.63611232 7.2122e-120 1.0000e+00 hypermethylated 2.4041e-117 1.0000e+00 hypermethylated 5.3275e-26 1.0000e+00 hypermethylated 8.8792e-24 1.0000e+00 hypermethylated 0.70179724 1.8311e-07 hypermethylated 5.9068e-06 hypermethylated 0.881288 0.8711189 0.01326354 10 0.8021286 0.8830056 -0.0808769 2.5832e-01 5.9887e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.4720e-01 5.5294e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02427591 1.4251e-01 insignificant 9.1940e-01 insignificant 0.8855707 0.1705668 0.6925835 10 0.8729159 0.1408389 0.7320770 1.8308e-85 1.0000e+00 hypermethylated 3.0514e-83 1.0000e+00 hypermethylated 1.3680e-21 1.0000e+00 hypermethylated 2.7360e-19 1.0000e+00 hypermethylated 0.71872985 2.4745e-08 hypermethylated 1.0622e-06 hypermethylated 0.8857650 0.8711189 0.02196225 10 0.8916658 0.8830056 0.00866029 1.5893e-01 8.0036e-01 insignificant 9.0814e-01 1.0000e+00 insignificant 2.9736e-01 8.8681e-01 insignificant 1.0000e+00 1.0000000 insignificant -7.3433e-03 7.1815e-01 insignificant 1.00000000 insignificant 0.1706556 0.8711189 -0.6971503 10 0.1536424 0.8830056 -0.7293631 1.0000e+00 4.3597e-54 hypomethylated 1.0000e+00 2.1799e-51 hypomethylated 1.0000e+00 1.7976e-14 hypomethylated 1.0000e+00 3.5951e-12 hypomethylated -0.7260732 9.9927e-07 hypomethylated 1.9256e-04 hypomethylated chr16 86142550 86143550 49516 ZCCHC14 ENSG00000140948 0.900556 310 9 0.854115 203 9 0.756651 231 9 0.943158 299 7 0.8777501 198 9 0.836614 288 9 0.882324 174 8 0.882701 230 9 0.8997726 219 8 0.930381 262 9 0.813346 325 9 0.817232 158 9 0.7889413 285 8 0.8732069 123 6 0.9256105 290 9 0.9122115 170 9 0.848485 68 5 0.949567 357 7 0.896467 207 9 0.8503678 250 9 0.966049 104 9 0.958025 159 6 0.922025 210 9 0.906572 129 9 0.934023 88 7 0.8805796 274 9 0.8818905 229 9 0.969620 149 9 0.862177 154 8 0.9121004 214 9 0.928133 216 9 0.929476 254 8 0.7935734 180 9 0.8586738 210 9 0.9056225 370 7 0.920988 63 7 0.793093 208 9 0.8628407 237 9 0.942216 281 8 0.9397793 327 9 0.9578123 408 6 0.9400353 275 7 0.949100 364 9 0.9172494 0.823836 0.8643918 0.926789 0.8967054 0.894345 0.877305 0.8624842 0.8916631 0.9214842 0.8945150 0.860621 0.9052605 0.865229 0.9139599 0.8866778 0.920026 0.931909 0.8716565 0.9413600 0.977415 0.945690 0.899480 0.9223250 0.9080843 0.9051507 0.888626 0.958239 0.841445 0.9076888 0.9146641 0.9124108 0.8814925 0.77947414 0.91663637 0.94130435 0.868831 0.8779937 0.9243763 0.954868 0.9437195 0.9448620 0.9445185 7 0.898214 0.9137615 -0.01538419 9 0.7772549 0.9087896 -0.13153470 0.9898043 2.3356e-02 weaklyHypometh 1.00000 4.1707e-01 insignificant 0.9972944 3.3833e-03 weaklyHypometh 1.00000 2.6025e-01 insignificant -0.04891635 0.0031510 weaklyHypometh 0.78775 insignificant 0.898407 0.8501577 4.0361e-02 9 0.8549804 0.8099162 0.04506427 1.5183e-03 2.3826e-01 weaklyHypermeth 7.0618e-03 1.0000e+00 weaklyHypermeth 7.3681e-01 2.5831e-02 inconclusive 1.0000e+00 6.1502e-01 insignificant 0.01617432 5.3419e-01 insignificant 1.0000e+00 insignificant 0.898407 0.9456193 -0.04317394 8 0.8549804 0.9427317 -0.0877513 9.9993e-01 3.0258e-04 weaklyHypometh 1.0000e+00 2.1613e-02 weaklyHypometh 9.9999e-01 6.7709e-05 weaklyHypometh 1.0000e+00 1.3542e-02 weaklyHypometh -0.07381572 3.8437e-06 weaklyHypometh 1.1836e-03 weaklyHypometh 0.9136823 0.8501577 0.0501731 9 0.8996686 0.8099162 0.0897524 1.1119e-03 9.1110e-01 weaklyHypermeth 5.4503e-03 1.0000e+00 weaklyHypermeth 1.4137e-01 7.7626e-01 insignificant 5.5878e-01 1.0000e+00 insignificant 0.06509067 3.0625e-02 weaklyHypermeth 1.7805e-01 insignificant 0.9136823 0.9456193 -0.02935341 8 0.8996686 0.9427317 -0.04306311 9.9012e-01 3.9129e-02 weaklyHypometh 1.0000e+00 7.7156e-01 insignificant 9.9495e-01 1.2089e-01 insignificant 1.0000e+00 1.0000000 insignificant -2.4899e-02 3.3385e-02 weaklyHypometh 0.47016804 insignificant 0.8501577 0.9456193 -0.0813489 8 0.8099162 0.9427317 -0.1328156 9.8300e-01 8.3071e-03 weaklyHypometh 1.0000e+00 4.3266e-02 weaklyHypometh 8.8364e-01 2.9496e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0899900 9.0793e-03 weaklyHypometh 7.0382e-02 weaklyHypometh chr16 86172850 86173850 49519 ZCCHC14 ENSG00000140948 0.558652 68 6 0.425674 71 6 0.521261 129 5 0.738172 139 5 0.5043956 40 5 0.734477 116 5 0.700926 53 5 0.680735 100 6 0.8478203 112 5 0.761040 70 5 0.781499 206 5 0.835758 55 5 0.6176471 96 5 0.5996667 123 5 0.5428438 104 5 0.8485714 94 5 0.055556 9 1 0.402174 97 6 0.821872 146 5 0.5630208 92 5 0.593651 67 5 0.260149 94 6 0.368839 93 6 0.450170 77 6 0.766162 44 5 0.6755991 67 6 0.7474203 153 5 0.707359 65 5 0.784472 74 6 0.5653333 118 5 0.507098 122 5 0.785140 106 5 0.0633503 87 6 0.0324074 45 6 0.0714286 14 1 0.000000 23 2 0.055615 252 5 0.0412366 146 5 0.403823 88 6 0.4539886 76 6 0.4799544 113 5 0.4406092 68 5 0.458623 91 6 0.6145402 0.490556 0.5104671 0.685186 0.5108098 0.733972 0.624728 0.6830962 0.7987614 0.6995332 0.7222146 0.834733 0.6197251 0.599918 0.6335712 0.8183489 0.352684 0.425213 0.8347208 0.6916440 0.672257 0.309205 0.661166 0.6470303 0.7072134 0.6105072 0.694044 0.769063 0.753656 0.5672727 0.4859556 0.7369450 0.1023065 0.05027174 NA 0.00000000 0.054907 0.0442540 0.4186113 0.473593 0.4950081 0.4546007 0.4477484 5 0.670840 0.6258124 0.03623263 5 0.5008464 0.4813067 0.01953968 0.4444909 9.9509e-01 insignificant 1.00000 1.0000e+00 insignificant 0.8845235 9.6481e-01 insignificant 1.00000 1.0000e+00 insignificant 0.02613869 0.6976764 insignificant 1.00000 insignificant 0.671891 0.0546737 6.1478e-01 5 0.5723959 0.0389299 0.53346595 2.4979e-36 1.0000e+00 hypermethylated 6.0924e-35 1.0000e+00 hypermethylated 3.4583e-13 1.0000e+00 hypermethylated 1.3964e-11 1.0000e+00 hypermethylated 0.58308180 1.4471e-11 lowCoverage 9.0443e-10 lowCoverage 0.672936 0.4541284 0.22784307 5 0.7152530 0.4179056 0.2973474 4.4465e-08 1.0000e+00 hypermethylated 1.2704e-06 1.0000e+00 hypermethylated 6.5155e-05 1.0000e+00 hypermethylated 1.8616e-03 1.0000e+00 hypermethylated 0.17968823 6.5026e-04 weaklyHypermeth 3.6126e-02 weaklyHypermeth 0.6263941 0.0546737 0.5713239 5 0.5500648 0.0389299 0.5111349 1.1344e-24 1.0000e+00 hypermethylated 2.2687e-23 1.0000e+00 hypermethylated 2.0354e-12 1.0000e+00 hypermethylated 8.8495e-11 1.0000e+00 hypermethylated 0.55694311 1.6272e-07 lowCoverage 5.6109e-06 lowCoverage 0.6281454 0.4568765 0.18956485 5 0.6417423 0.4399375 0.20180482 5.4976e-05 1.0000e+00 weaklyHypermeth 9.3180e-04 1.0000e+00 weaklyHypermeth 7.4112e-05 1.0000e+00 weaklyHypermeth 2.6469e-03 1.0000000 weaklyHypermeth 1.5355e-01 1.1831e-02 weaklyHypermeth 0.31133945 insignificant 0.0548673 0.4568765 -0.4028508 5 0.0454183 0.4399375 -0.3945192 1.0000e+00 6.3722e-16 hypomethylated 1.0000e+00 1.8206e-14 hypomethylated 1.0000e+00 2.5532e-08 hypomethylated 1.0000e+00 1.4185e-06 hypomethylated -0.4033936 4.7579e-09 lowCoverage 2.3790e-06 lowCoverage chr16 86312850 86313850 49521 ENSG00000205047 0.921827 784 6 0.891787 154 6 0.968944 56 6 0.938877 352 6 0.9572650 71 6 0.945901 663 6 0.835802 240 6 0.987805 93 6 0.9027778 58 5 1.000000 21 1 0.815850 149 6 0.939560 36 3 0.9833333 59 3 0.9875000 43 3 0.9821429 87 6 1.0000000 45 2 NA 0 0 0.904120 1159 6 0.969063 416 6 0.9481329 541 6 0.869048 49 6 0.661765 20 1 0.957098 138 6 0.962500 88 6 0.974837 383 6 0.6981816 411 6 0.9259259 54 1 0.500000 12 1 0.915254 59 1 0.9375053 241 6 0.904296 256 6 0.811541 267 6 0.7885680 196 6 0.8231267 222 6 0.8813849 497 6 1.000000 12 1 0.560043 166 6 0.7936615 298 6 0.865951 598 6 0.9273110 317 6 0.8873077 816 6 0.8723000 319 7 0.860065 525 6 0.9183673 0.729730 0.9565217 0.945946 1.0000000 0.957627 0.871795 0.9268293 0.9000000 1.0000000 0.9142857 0.923077 0.9000000 0.900000 1.0000000 1.0000000 NA 0.875622 0.9113924 0.8589744 0.785714 0.647059 0.954545 1.0000000 0.9100000 0.8846154 0.925926 1.000000 0.915254 0.9130435 0.9347826 0.9846154 0.9230769 0.61702128 0.63541667 1.00000000 0.970588 0.4000000 0.8666667 0.901639 0.8800000 0.7816901 0.8292683 1 0.932510 0.9357613 -0.00505924 6 0.9361659 0.7670008 0.16916511 0.8349859 4.7158e-01 insignificant 1.00000 1.0000e+00 insignificant 0.0697230 9.9482e-01 insignificant 1.00000 1.0000e+00 insignificant 0.09792617 0.0469040 lowCoverage 1.00000 lowCoverage 0.932551 0.8329734 9.0654e-02 6 0.9489328 0.5662117 0.38272107 5.5729e-04 3.7089e-01 weaklyHypermeth 2.7589e-03 1.0000e+00 weaklyHypermeth 1.6646e-01 9.6847e-01 insignificant 6.5278e-01 1.0000e+00 insignificant 0.13329149 7.3675e-02 lowCoverage 3.6654e-01 lowCoverage 0.932325 0.8780583 0.05829555 6 0.8321475 0.8997797 -0.0676322 3.7608e-09 9.2371e-01 weaklyHypermeth 1.3432e-07 1.0000e+00 weaklyHypermeth 1.9254e-05 9.9997e-01 weaklyHypermeth 6.2111e-04 1.0000e+00 weaklyHypermeth 0.05850188 4.3989e-03 lowCoverage 1.1889e-01 lowCoverage 0.9352882 0.8335735 0.0964100 6 0.6817785 0.6291241 0.0526544 2.7511e-02 5.3716e-01 weaklyHypermeth 1.0747e-01 1.0000e+00 insignificant 8.5158e-01 6.7729e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03536533 6.3795e-01 lowCoverage 1.0000e+00 lowCoverage 0.9357613 0.8780109 0.07558709 6 0.7670008 0.8872522 -0.12025133 1.5233e-06 9.4158e-01 weaklyHypermeth 4.0088e-05 1.0000e+00 weaklyHypermeth 1.2020e-03 8.7399e-01 weaklyHypermeth 2.6130e-02 1.0000000 weaklyHypermeth -3.9424e-02 3.9263e-01 lowCoverage 1.00000000 lowCoverage 0.8341745 0.8780109 -0.0412498 6 0.7077646 0.8872522 -0.1794876 4.2905e-05 5.8686e-01 inconclusive 1.8654e-03 1.0000e+00 inconclusive 4.8190e-03 9.1772e-01 inconclusive 1.8532e-01 1.0000e+00 insignificant -0.0747896 2.6557e-01 insignificant 9.0768e-01 insignificant chr16 86427950 86428950 49527 KLHDC4 ENSG00000104731 0.894596 185 5 0.895567 162 5 0.849915 216 5 0.786177 293 5 0.9107353 98 5 0.912922 253 5 0.970014 208 5 0.965000 167 5 0.9633181 117 2 0.984524 267 2 0.955595 215 5 0.945631 137 2 0.8760528 196 2 0.9002055 173 2 0.8732617 285 2 0.9562500 59 2 1.000000 9 1 0.726601 178 5 0.903838 169 2 0.9698305 211 5 0.955556 54 5 0.981774 108 2 0.707085 145 5 0.971429 47 2 0.909901 117 2 0.9723233 261 5 0.6510145 115 3 0.941481 100 2 0.694151 157 2 0.8744988 297 2 0.812074 271 5 0.909048 214 5 0.8123719 211 5 0.9250000 101 2 1.0000000 62 4 0.894928 35 2 0.741892 133 4 0.8379860 258 5 0.943103 184 5 0.9546032 210 5 0.9301557 329 5 0.4581123 138 2 0.920427 203 5 0.9055679 0.937688 0.8821959 0.913430 0.9028422 0.940058 0.934866 0.9222115 0.8892194 0.9647207 0.9557602 0.891040 0.9400609 0.905399 0.9312445 0.8594952 0.995662 0.924081 0.9219425 0.9377249 0.934188 0.967429 0.972342 0.9576923 0.8792982 0.9344514 0.764604 0.881296 0.946184 0.9388320 0.9355966 0.9116529 0.7069491 0.88894231 1.00000000 0.91567706 0.920307 0.8011689 0.9143328 0.940855 0.9308392 0.9249830 0.9126228 2 0.923269 0.9187898 0.00402920 4 0.8781873 0.6623004 0.21588694 0.6058179 9.1487e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.5498070 5.6003e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.04697381 0.2316666 lowCoverage 1.00000 lowCoverage 0.923698 0.8350000 9.1398e-02 5 0.9294622 0.8445760 0.08488622 4.7515e-05 9.4085e-01 weaklyHypermeth 2.5140e-04 1.0000e+00 weaklyHypermeth 2.9039e-01 5.5465e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.04330553 3.1706e-01 lowCoverage 1.0000e+00 lowCoverage 0.923269 0.9257519 -0.00119543 5 0.8781873 0.6675714 0.2106159 7.7871e-01 8.5727e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.8103e-01 9.7086e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.07072162 5.0518e-01 lowCoverage 1.0000e+00 lowCoverage 0.9207447 0.8350000 0.0923155 4 0.9272205 0.8445760 0.0826445 5.8483e-03 9.7136e-01 lowCoverage 2.5763e-02 1.0000e+00 lowCoverage 2.1304e-01 9.4266e-01 lowCoverage 7.9198e-01 1.0000e+00 lowCoverage -0.00366828 9.4340e-01 lowCoverage 1.0000e+00 lowCoverage 0.9187898 0.9257519 -0.00464624 4 0.6623004 0.6675714 -0.00527100 9.3529e-01 8.8164e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 6.6884e-01 9.9366e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 2.3748e-02 8.2498e-01 lowCoverage 1.00000000 lowCoverage 0.8350000 0.9274953 -0.0933645 5 0.8445760 0.9345999 -0.0900239 9.0885e-01 2.2427e-02 weaklyHypometh 1.0000e+00 1.0194e-01 insignificant 4.3410e-01 4.8263e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0274161 8.0014e-01 lowCoverage 1.0000e+00 lowCoverage chr16 86431050 86432050 49528 KLHDC4 ENSG00000104731 0.914707 131 5 0.812094 154 6 0.737898 154 6 0.957143 82 5 0.9472934 95 6 0.910419 173 5 0.883180 161 6 0.919456 115 6 0.9393659 127 6 0.894307 115 6 0.913030 211 6 0.891534 111 6 0.9398668 179 6 NA 0 0 0.8841053 127 6 0.7800000 75 6 0.890631 159 6 0.688690 84 5 0.932136 131 6 0.8035714 45 2 0.802116 47 4 0.921429 25 3 0.908213 152 6 0.878205 41 4 0.814815 40 5 0.8305383 166 6 0.7600529 62 5 0.847455 57 5 0.947882 149 6 0.8577090 198 6 0.888900 176 6 0.941991 193 6 0.8328882 150 6 0.8510394 131 6 0.8271605 240 6 0.674603 63 5 0.828245 77 6 0.7811776 178 6 0.712012 109 6 0.8425462 217 6 0.6566101 141 6 0.7281415 122 6 0.688567 143 7 0.9080667 0.780184 0.7420296 0.933047 0.9521975 0.883930 0.872457 0.9184803 0.9248262 0.8886161 0.9069710 0.886243 0.9342497 NA 0.8918056 0.7318761 0.870528 0.782559 0.9294356 0.9453552 0.813965 0.899558 0.897422 0.8352249 0.7717061 0.7947077 0.783936 0.873010 0.950355 0.8163454 0.9058290 0.9395794 0.8025460 0.78577355 0.63893949 0.52641166 0.794982 0.6587009 0.8379208 0.785140 0.7237648 0.8365760 0.8193721 3 0.884010 0.8874426 -0.00216029 6 0.8869201 0.8876933 -0.00077324 0.7648394 6.7034e-01 insignificant 1.00000 1.0000e+00 insignificant 0.6010279 7.2764e-01 insignificant 1.00000 1.0000e+00 insignificant 0.00915051 0.7079460 insignificant 1.00000 insignificant 0.884010 0.7747318 1.3072e-01 6 0.8869201 0.8100134 0.07690669 4.6323e-05 2.9133e-01 weaklyHypermeth 2.4640e-04 1.0000e+00 weaklyHypermeth 2.1596e-02 2.9180e-01 weaklyHypermeth 1.0962e-01 1.0000e+00 insignificant 0.07657373 3.7552e-02 weaklyHypermeth 2.1336e-01 insignificant 0.884219 0.8109589 0.07946297 6 0.8135023 0.7484606 0.0650417 2.7271e-03 1.0000e+00 weaklyHypermeth 3.2857e-02 1.0000e+00 weaklyHypermeth 1.2949e-02 1.0000e+00 weaklyHypermeth 1.6391e-01 1.0000e+00 insignificant 0.15018404 4.7528e-03 weaklyHypermeth 1.2507e-01 insignificant 0.8874426 0.7747318 0.1206818 6 0.8876933 0.8100134 0.0776799 1.3535e-03 4.3056e-01 weaklyHypermeth 6.6023e-03 1.0000e+00 weaklyHypermeth 6.6740e-02 2.0287e-01 insignificant 2.9531e-01 1.0000e+00 insignificant 0.06742321 6.0760e-02 insignificant 2.9966e-01 insignificant 0.8874426 0.8091168 0.08676010 6 0.8876933 0.8021781 0.08551523 8.8341e-04 9.9964e-01 weaklyHypermeth 1.0643e-02 1.0000e+00 weaklyHypermeth 1.2493e-02 9.9811e-01 weaklyHypermeth 1.5424e-01 1.0000000 insignificant 1.4103e-01 6.7153e-03 weaklyHypermeth 0.23156098 insignificant 0.7747318 0.8091168 -0.0388736 6 0.8100134 0.8021781 0.0078353 5.1742e-02 4.3391e-01 insignificant 8.4932e-01 1.0000e+00 insignificant 3.5632e-02 4.8031e-01 inconclusive 6.9866e-01 1.0000e+00 insignificant 0.0736103 1.1141e-01 insignificant 4.7612e-01 insignificant chr16 86435950 86436950 49529 KLHDC4 ENSG00000104731 0.968481 170 4 0.889805 163 6 0.753450 141 6 0.957699 84 4 0.6442187 183 4 0.920695 335 6 0.862147 167 6 0.963419 204 3 0.9083463 131 6 0.899520 65 5 0.829040 239 6 0.915584 41 3 0.9192935 192 6 0.6617647 111 3 0.9361361 121 3 0.6666667 4 0 NA 0 0 0.920504 352 6 0.938613 325 6 0.9634673 244 4 0.895923 91 4 0.970588 34 2 0.805319 146 4 0.954365 76 6 0.925175 306 6 0.9517965 192 6 0.6391667 90 3 0.577399 58 3 0.790504 392 6 0.9514784 152 6 0.947578 286 6 0.826827 262 6 0.8928121 199 5 0.9612903 142 6 0.9272727 38 3 0.905176 250 6 0.934722 82 6 0.9063428 302 6 0.948823 170 6 0.8969984 170 6 0.8740609 210 5 0.6895460 109 4 0.845904 177 6 0.9730317 0.873162 0.6803021 0.901919 0.9286442 0.894118 0.880574 0.9107420 0.9148404 0.9066572 0.9358784 0.840085 0.9169560 0.943664 0.8733068 NA NA 0.906286 0.9291285 0.9248179 0.887519 0.946900 0.847833 0.9302101 0.9081334 0.9244136 0.911318 0.858709 0.926354 0.9557861 0.9434406 0.9211118 0.9097331 0.98619804 0.90049751 0.89591010 0.927032 0.9770080 0.9198314 0.889446 0.7871834 0.8269495 0.8401253 3 0.906193 0.9194245 -0.01506029 4 0.8024914 0.7933530 0.00913841 0.7756024 6.7551e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.1408662 9.4073e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.01640308 0.7196834 lowCoverage 1.00000 lowCoverage 0.906470 0.9368213 -2.7421e-02 4 0.9171331 0.8826667 0.03446640 2.7978e-02 1.1393e-01 lowCoverage 1.0802e-01 1.0000e+00 lowCoverage 3.4263e-01 4.2818e-02 lowCoverage 1.0000e+00 9.1102e-01 lowCoverage -0.05185610 6.4297e-02 lowCoverage 3.2473e-01 lowCoverage 0.906193 0.8612440 0.05240575 4 0.8024914 0.7838617 0.0186297 4.6160e-03 3.2139e-01 lowCoverage 5.3674e-02 1.0000e+00 lowCoverage 1.1979e-02 3.5479e-01 lowCoverage 1.5859e-01 1.0000e+00 lowCoverage 0.01834689 7.2597e-01 lowCoverage 1.0000e+00 lowCoverage 0.9203072 0.9368213 -0.0153031 6 0.9066892 0.8826667 0.0240225 7.7498e-01 2.3795e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7053e-01 3.7001e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.06825918 1.0533e-01 lowCoverage 4.6604e-01 lowCoverage 0.9203072 0.8633094 0.06034518 6 0.9066892 0.8958419 0.01084724 3.7948e-03 4.4199e-01 weaklyHypermeth 3.9945e-02 1.0000e+00 weaklyHypermeth 1.8951e-02 1.3212e-01 weaklyHypermeth 2.1293e-01 1.0000000 insignificant 1.9438e-03 9.7382e-01 lowCoverage 1.00000000 lowCoverage 0.9368213 0.8633094 0.0739960 6 0.8826667 0.8958419 -0.0131753 5.9266e-02 3.5023e-01 insignificant 9.5591e-01 1.0000e+00 insignificant 1.8180e-02 7.7682e-01 weaklyHypermeth 4.3286e-01 1.0000e+00 insignificant 0.0702030 1.8631e-01 insignificant 6.9518e-01 insignificant chr16 86445250 86446250 49530 KLHDC4 ENSG00000104731 0.770854 210 9 0.684102 162 10 0.685054 249 10 0.865684 156 4 0.7428929 172 10 0.789519 224 10 0.773073 208 10 0.773604 133 10 0.7433153 149 10 0.735647 136 10 0.802160 343 10 0.716266 156 9 0.7590343 214 10 0.6000000 19 2 0.7142424 141 10 0.6817460 84 8 0.674405 80 8 0.831276 130 9 0.827182 233 10 0.7285512 174 10 0.799196 164 10 0.506067 64 4 0.817079 221 10 0.683576 100 9 0.710173 177 4 0.7408633 154 10 0.7000316 113 10 0.807589 82 9 0.832422 77 6 0.7826912 190 10 0.831600 188 10 0.776057 285 10 0.7154984 149 10 0.7313865 243 10 0.7487753 209 10 0.679012 150 7 0.656002 130 8 0.6945624 201 10 0.803433 120 6 0.7360497 214 9 0.7899393 119 6 0.8178591 158 6 0.871307 139 6 0.7827797 0.604885 0.7430655 0.852550 0.7370911 0.831920 0.786223 0.7788937 0.7031276 0.7619761 0.8061896 0.658763 0.7252521 NA 0.6833172 0.6044833 0.647479 0.793441 0.8318787 0.8885430 0.769221 0.634958 0.834028 0.8052677 0.7610421 0.8425856 0.813626 0.877864 0.780930 0.7686396 0.8429772 0.8614064 0.6936218 0.67595568 0.75233384 0.65098803 0.776616 0.6545236 0.8129719 0.818402 0.8321435 0.7903345 0.8480069 4 0.775964 0.8154270 -0.03202079 10 0.6473519 0.6479591 -0.00060716 0.9844180 1.2479e-01 insignificant 1.00000 9.3542e-01 insignificant 0.9919055 1.9011e-01 insignificant 1.00000 1.0000e+00 insignificant -0.00401510 0.8955488 insignificant 1.00000 insignificant 0.776195 0.7772643 3.1188e-02 10 0.6971482 0.5793669 0.11778132 5.6507e-06 2.1930e-02 weaklyHypermeth 3.3635e-05 4.6661e-01 weaklyHypermeth 3.5346e-01 6.1218e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 0.04072420 5.7709e-02 insignificant 2.9594e-01 insignificant 0.776786 0.7786667 -0.01873444 6 0.7762927 0.7749842 0.0013085 5.1904e-01 2.1380e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7994e-01 2.5741e-02 weaklyHypometh 1.0000e+00 5.2532e-01 insignificant -0.05878724 5.4691e-02 insignificant 5.6171e-01 insignificant 0.8157750 0.7772643 0.0730653 10 0.6593405 0.5793669 0.0799737 9.0483e-05 4.0191e-01 weaklyHypermeth 5.2002e-04 1.0000e+00 weaklyHypermeth 2.7261e-01 4.5413e-01 insignificant 9.7473e-01 1.0000e+00 insignificant 0.04473930 1.5725e-01 insignificant 6.1666e-01 insignificant 0.8185350 0.7786667 0.00715751 6 0.8071427 0.7749842 0.03215853 1.6990e-01 7.5294e-01 insignificant 9.3353e-01 1.0000e+00 insignificant 8.4415e-01 4.1108e-01 insignificant 1.0000e+00 1.0000000 insignificant -5.4772e-02 1.3441e-01 insignificant 0.97469022 insignificant 0.7813953 0.7786667 -0.1085994 6 0.7281769 0.7749842 -0.0468072 2.6503e-01 2.1783e-04 weaklyHypometh 1.0000e+00 1.5671e-03 weaklyHypometh 9.3565e-01 8.3657e-02 insignificant 1.0000e+00 3.9276e-01 insignificant -0.0995114 6.3799e-03 weaklyHypometh 5.4067e-02 weaklyHypometh chr16 86452750 86453750 49531 KLHDC4 ENSG00000104731 0.942141 364 7 0.775715 216 8 0.786232 102 7 0.936354 350 8 0.9404762 98 8 0.976990 292 7 0.923890 124 8 0.956372 174 8 0.9267399 70 7 0.956710 81 7 0.829762 310 8 1.000000 17 0 0.8509804 78 7 0.8803419 57 7 0.8772222 68 6 1.0000000 33 3 NA 0 0 0.861524 476 7 0.940751 188 8 0.9722341 246 8 0.814815 34 2 0.866667 26 3 0.921526 133 8 0.948501 60 7 0.912086 338 9 0.9379755 197 8 0.7253118 58 5 0.865625 38 5 0.982953 205 8 0.9682145 221 8 0.967251 281 8 0.962891 352 8 0.7789177 190 8 0.9321985 260 7 0.8000000 118 3 0.955882 209 5 0.941050 119 8 0.8790309 260 7 0.851392 172 7 0.4338233 326 8 0.7337126 328 7 0.8959838 229 7 0.884732 265 7 0.9299744 0.866709 0.6998693 0.939033 0.9504294 0.969597 0.896426 0.9613123 0.8829040 0.9676034 0.9374609 1.000000 0.8610093 0.980454 0.8840619 0.9801821 NA 0.843043 0.9539917 0.9650707 0.898907 0.856013 0.914729 0.9284153 0.9038160 0.9257385 0.821465 0.940931 0.977070 0.9711627 0.9563505 0.9606552 0.8225186 0.95007277 0.89730576 0.93900675 0.949735 0.8621076 0.8416802 0.411536 0.7131725 0.8990382 0.9060150 1 0.926793 0.9387545 -0.01350239 8 0.9183298 0.9385353 -0.02020553 0.9963801 2.0688e-01 insignificant 1.00000 1.0000e+00 insignificant 0.8094123 4.5087e-01 insignificant 1.00000 1.0000e+00 insignificant 0.00618749 0.8198723 insignificant 1.00000 insignificant 0.926771 0.9160900 5.5451e-03 8 0.9092553 0.9096601 -0.00040479 4.6822e-01 4.3136e-02 inconclusive 1.0000e+00 7.3112e-01 insignificant 7.5095e-01 3.3725e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03115888 3.9515e-01 insignificant 1.0000e+00 insignificant 0.927130 0.7257576 0.20955463 7 0.9206395 0.7123286 0.2083109 1.4942e-16 1.0000e+00 hypermethylated 1.2452e-14 1.0000e+00 hypermethylated 2.1846e-06 9.9995e-01 hypermethylated 9.1024e-05 1.0000e+00 hypermethylated 0.15241008 1.5330e-01 insignificant 9.3492e-01 insignificant 0.9386914 0.9160900 0.0223031 8 0.9317059 0.9096601 0.0220458 2.4343e-01 5.0183e-01 insignificant 7.8216e-01 1.0000e+00 insignificant 4.2186e-01 4.8558e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02497139 5.2595e-01 insignificant 1.0000e+00 insignificant 0.9395203 0.7257576 0.22200340 7 0.9394735 0.7123286 0.22714492 7.4559e-12 1.0000e+00 hypermethylated 5.7353e-10 1.0000e+00 hypermethylated 8.6177e-06 9.9999e-01 hypermethylated 4.4356e-04 1.0000000 hypermethylated 1.4622e-01 1.6818e-01 insignificant 1.00000000 insignificant 0.9167397 0.7257576 0.2020206 7 0.9150343 0.7123286 0.2027057 1.5725e-05 1.0000e+00 hypermethylated 7.5888e-04 1.0000e+00 hypermethylated 1.4042e-04 9.9994e-01 hypermethylated 1.0801e-02 1.0000e+00 hypermethylated 0.1212512 2.4367e-01 insignificant 8.4902e-01 insignificant chr16 86501650 86502650 49534 SLC7A5 ENSG00000103257 0.918083 228 8 0.879030 185 8 0.725907 214 7 0.957416 188 6 0.8657734 86 6 0.881235 299 8 0.838898 146 6 0.895005 153 8 0.7791773 142 6 0.958093 153 7 0.920128 321 8 0.944006 108 4 0.9561500 184 7 1.0000000 3 0 0.8566338 112 6 0.7915692 142 4 0.954628 118 4 0.888680 162 7 0.965427 157 7 0.8978626 218 8 0.860199 109 7 0.761328 74 5 0.777924 163 8 0.927235 172 8 0.888000 72 5 0.8520092 236 8 0.9217989 136 7 0.829167 72 4 0.913969 152 7 0.9456278 260 8 0.918628 198 8 0.904494 319 8 0.0190225 282 8 0.0039062 196 7 0.0033784 308 8 0.130080 110 7 0.144984 152 8 0.0575850 348 8 0.503199 138 8 0.7656638 317 8 0.8234204 189 8 0.8777211 125 7 0.574927 232 8 0.9137526 0.828127 0.7060960 0.943132 0.8611509 0.876188 0.908649 0.8723725 0.9034199 0.9275301 0.9158194 0.907421 0.9526046 NA 0.9692303 0.8679284 0.934945 0.880094 0.9648441 0.9091968 0.864957 0.707310 0.887793 0.9196608 0.8358276 0.8978668 0.883967 0.868864 0.877293 0.9687251 0.8531809 0.9153380 0.0220516 0.00732854 0.00251136 0.15429464 0.033277 0.0740209 0.5351966 0.748221 0.8327870 0.8804072 0.6109163 3 0.891534 0.9037188 -0.01313400 8 0.8879836 0.8370349 0.05094876 0.9785533 3.6049e-01 insignificant 1.00000 1.0000e+00 insignificant 0.3414961 8.2720e-01 insignificant 1.00000 1.0000e+00 insignificant 0.01865363 0.4316110 insignificant 1.00000 insignificant 0.891639 0.0343840 8.5246e-01 8 0.9062004 0.1399578 0.76624258 7.3646e-111 1.0000e+00 hypermethylated 1.4729e-108 1.0000e+00 hypermethylated 5.7698e-21 1.0000e+00 hypermethylated 5.7698e-19 1.0000e+00 hypermethylated 0.83385914 5.3078e-10 hypermethylated 2.3077e-08 hypermethylated 0.891541 0.6913087 0.18234389 8 0.8944754 0.7043695 0.1901059 1.0126e-14 1.0000e+00 weaklyHypermeth 6.7509e-13 1.0000e+00 weaklyHypermeth 1.7695e-08 1.0000e+00 weaklyHypermeth 2.5279e-06 1.0000e+00 weaklyHypermeth 0.18469880 6.2067e-02 insignificant 5.8162e-01 insignificant 0.9037871 0.0343840 0.8663444 8 0.8049354 0.1399578 0.6649776 5.8585e-97 1.0000e+00 hypermethylated 1.4646e-94 1.0000e+00 hypermethylated 1.4622e-17 1.0000e+00 hypermethylated 1.4622e-15 1.0000e+00 hypermethylated 0.81520551 3.1007e-10 hypermethylated 4.4295e-08 hypermethylated 0.9042499 0.6913087 0.19481605 8 0.9055523 0.7043695 0.20118278 1.1826e-14 1.0000e+00 weaklyHypermeth 1.1826e-12 1.0000e+00 weaklyHypermeth 1.7292e-08 1.0000e+00 weaklyHypermeth 3.4585e-06 1.0000000 weaklyHypermeth 1.6605e-01 8.2819e-02 insignificant 0.75565076 insignificant 0.0336918 0.6913087 -0.6658854 8 0.0324525 0.7043695 -0.6719170 1.0000e+00 5.7966e-34 hypomethylated 1.0000e+00 6.4406e-32 hypomethylated 1.0000e+00 1.6373e-12 hypomethylated 1.0000e+00 2.7289e-10 hypomethylated -0.6491603 3.7626e-04 hypomethylated 8.5514e-03 hypomethylated chr16 86535850 86536850 49536 CA5A ENSG00000174990 0.414835 67 5 0.630321 110 5 0.771429 35 5 0.559524 75 5 0.2500000 31 5 0.331097 77 5 0.625000 42 5 0.760000 50 5 0.7733333 26 5 0.688889 45 5 0.737939 123 5 0.875000 8 0 0.9027778 41 5 0.2777778 16 0 0.7500000 81 5 0.4000000 5 0 NA 0 0 0.447517 135 5 0.901515 111 5 0.8428571 70 5 0.305556 17 0 0.448571 30 5 0.520833 41 5 0.700000 18 3 0.386708 299 5 0.8203077 129 5 0.3357143 48 5 0.471429 22 2 0.683081 61 5 0.8944444 88 5 0.819444 105 5 0.831579 95 5 0.0000000 50 5 0.1333333 119 5 0.0000000 2 0 0.093333 225 5 0.081845 73 5 0.0085470 198 5 0.323077 65 5 0.3867521 65 5 0.2010256 69 5 0.4143333 123 5 0.316667 60 5 0.5039246 0.753350 0.7755102 0.448375 0.2910053 0.286238 0.662698 0.7555556 0.7661376 0.7019400 0.7101865 0.746032 0.8904321 0.280423 0.6825397 0.3492063 NA 0.620954 0.8896104 0.8197279 0.206349 0.478005 0.615079 0.8910601 0.4498769 0.8329670 0.346032 0.452381 0.747715 0.8994709 0.8881330 0.8195489 0.0000000 0.11640212 NA 0.07266314 0.024943 0.0089540 0.3076923 0.216931 0.2081400 0.4152910 0.3082011 0 0.664049 0.6568730 0.00825092 5 0.6797242 0.5642396 0.11548459 0.2815862 8.8029e-01 insignificant 1.00000 1.0000e+00 insignificant 0.3269642 8.4479e-01 insignificant 1.00000 1.0000e+00 insignificant 0.02693892 0.7361681 lowCoverage 1.00000 lowCoverage 0.663470 0.0629685 6.0128e-01 5 0.5947587 0.1017694 0.49298927 1.3532e-22 1.0000e+00 hypermethylated 2.0819e-21 1.0000e+00 hypermethylated 3.4084e-10 1.0000e+00 hypermethylated 7.1009e-09 1.0000e+00 hypermethylated 0.57556804 3.1378e-10 lowCoverage 1.4942e-08 lowCoverage 0.663167 0.3219895 0.34272863 5 0.6263449 0.4335102 0.1928347 2.0785e-10 9.7831e-01 hypermethylated 9.4477e-09 1.0000e+00 hypermethylated 5.0501e-07 9.8914e-01 hypermethylated 2.9707e-05 1.0000e+00 hypermethylated 0.30004025 1.2017e-04 lowCoverage 1.3352e-02 lowCoverage 0.6568730 0.0616541 0.5967494 5 0.5642396 0.0448793 0.5193603 2.9745e-17 1.0000e+00 hypermethylated 4.1894e-16 1.0000e+00 hypermethylated 8.4001e-09 1.0000e+00 hypermethylated 1.7143e-07 1.0000e+00 hypermethylated 0.54862912 9.7009e-07 lowCoverage 2.6947e-05 lowCoverage 0.6585880 0.3219895 0.33816073 5 0.6166128 0.4335102 0.18310268 1.4356e-07 9.4103e-01 hypermethylated 4.4864e-06 1.0000e+00 hypermethylated 2.8306e-05 9.7390e-01 hypermethylated 1.1794e-03 1.0000000 hypermethylated 2.7310e-01 1.7360e-03 lowCoverage 0.11573031 lowCoverage 0.0617470 0.3219895 -0.2598716 5 0.0523592 0.4335102 -0.3811510 1.0000e+00 7.8917e-09 hypomethylated 1.0000e+00 1.0249e-07 hypomethylated 1.0000e+00 8.8192e-07 hypomethylated 1.0000e+00 2.4498e-05 hypomethylated -0.2755278 4.0677e-04 lowCoverage 8.8346e-03 lowCoverage chr16 86734850 86735850 49541 ENSG00000205037 0.821480 229 6 0.831900 138 6 0.761252 114 6 0.803956 100 5 0.8073129 108 6 0.867772 198 6 0.827786 178 6 0.849144 90 5 0.8232843 145 5 0.977135 95 5 0.797912 134 6 0.826859 143 6 0.8386243 142 5 NA 0 0 0.8380860 133 6 0.8561574 124 6 0.755952 106 5 0.737233 148 6 0.855019 134 6 0.8789249 203 6 0.803164 142 6 0.668869 64 5 0.794576 107 6 0.705556 59 4 0.881481 39 5 0.8561614 141 5 0.7110256 83 6 0.773611 72 5 0.725550 119 5 0.8456582 166 6 0.802952 156 6 0.868655 235 6 0.1012758 154 6 0.2670682 148 6 0.4577381 79 4 0.182978 118 5 0.308824 75 5 0.2827672 201 6 0.732804 172 6 0.8192635 254 6 0.9387839 137 6 0.5837672 165 5 0.775157 175 5 0.8808833 0.891396 0.7264107 0.890196 0.8529676 0.898022 0.833358 0.8394374 0.8743025 0.9826437 0.8340643 0.864738 0.8761166 NA 0.8661491 0.8871871 0.754862 0.764081 0.8679221 0.8910424 0.845536 0.721899 0.834940 0.7116271 0.9380764 0.8686129 0.756163 0.863801 0.751009 0.8896124 0.8052454 0.9039991 0.0924831 0.26725331 0.47508470 0.20012892 0.252802 0.3058661 0.7474387 0.814650 0.9261716 0.5588679 0.8179951 4 0.841848 0.8481562 0.00433811 6 0.8303019 0.8206732 0.00962868 0.3292284 6.0888e-01 insignificant 1.00000 1.0000e+00 insignificant 0.0511313 8.2638e-01 insignificant 1.00000 1.0000e+00 insignificant 0.04281385 0.0856922 insignificant 1.00000 insignificant 0.841848 0.2309677 6.1596e-01 6 0.8303019 0.2352529 0.59504900 1.4949e-48 1.0000e+00 hypermethylated 5.9794e-47 1.0000e+00 hypermethylated 8.0154e-13 1.0000e+00 hypermethylated 2.9687e-11 1.0000e+00 hypermethylated 0.56247695 5.0957e-05 hypermethylated 8.4929e-04 hypermethylated 0.841848 0.7320044 0.07626814 6 0.8303019 0.7771351 0.0531667 7.3520e-04 8.1487e-01 weaklyHypermeth 9.8027e-03 1.0000e+00 weaklyHypermeth 3.7663e-02 8.4577e-01 weaklyHypermeth 3.7663e-01 1.0000e+00 insignificant 0.05929712 3.6822e-01 insignificant 1.0000e+00 insignificant 0.8481562 0.2309677 0.6085330 6 0.8206732 0.2352529 0.5854203 1.8228e-28 1.0000e+00 hypermethylated 4.6738e-27 1.0000e+00 hypermethylated 4.6373e-10 1.0000e+00 hypermethylated 1.2533e-08 1.0000e+00 hypermethylated 0.51966309 3.1795e-05 hypermethylated 6.1145e-04 hypermethylated 0.8481562 0.7320044 0.05286025 6 0.8206732 0.7771351 0.04353806 3.3764e-02 7.4593e-01 weaklyHypermeth 2.5197e-01 1.0000e+00 insignificant 2.0098e-01 3.4753e-01 insignificant 1.0000e+00 1.0000000 insignificant 1.6483e-02 7.9889e-01 insignificant 1.00000000 insignificant 0.2309677 0.7320044 -0.5330529 6 0.2352529 0.7771351 -0.5418823 1.0000e+00 1.7081e-14 hypomethylated 1.0000e+00 4.5795e-13 hypomethylated 1.0000e+00 4.0450e-08 hypomethylated 1.0000e+00 1.9262e-06 hypomethylated -0.5031798 1.3480e-04 hypomethylated 3.7592e-03 hypomethylated chr16 86741750 86742750 49542 ENSG00000205037 0.900641 1097 23 0.825993 661 23 0.832083 570 23 0.905265 1103 23 0.8733586 458 22 0.897109 1227 23 0.803213 463 20 0.897889 740 23 0.8427522 654 23 0.899550 851 23 0.873394 999 23 0.882840 408 21 0.8798416 828 23 0.9175359 432 20 0.8786766 727 22 0.9171723 341 19 0.844855 610 6 0.682233 1601 23 0.914963 944 23 0.8816725 913 23 0.794571 319 23 0.887633 419 23 0.926112 732 23 0.858824 360 17 0.876573 348 23 0.8890049 906 23 0.8244740 577 23 0.892879 401 17 0.879320 815 25 0.9248169 857 23 0.919885 904 23 0.934684 1207 23 0.7269075 701 25 0.6312024 580 19 0.5440816 608 13 0.760883 156 12 0.648001 570 25 0.6846977 1086 23 0.868190 916 22 0.9194506 1060 23 0.8872120 1270 21 0.8249691 1153 21 0.793573 1044 23 0.9057650 0.817429 0.8302656 0.950427 0.9339430 0.915123 0.887532 0.9086943 0.8668893 0.9482053 0.9075495 0.924692 0.9247904 0.911958 0.9043736 0.9231928 0.867984 0.801733 0.9253353 0.9132982 0.869111 0.906234 0.921193 0.9369489 0.8982500 0.8784740 0.882079 0.918886 0.909968 0.9325170 0.9272493 0.9378221 0.7978634 0.69136931 0.75431158 0.79800207 0.766873 0.6579694 0.9036257 0.933252 0.9227333 0.8725198 0.8119785 19 0.899238 0.9127996 -0.01507940 23 0.8349777 0.8571404 -0.02216275 0.9900830 2.8663e-02 weaklyHypometh 1.00000 4.5496e-01 insignificant 0.9920457 1.7939e-02 weaklyHypometh 1.00000 5.1131e-01 insignificant -0.01651268 0.3455487 insignificant 1.00000 insignificant 0.899404 0.6325317 2.3955e-01 23 0.8624427 0.6031674 0.25927531 1.8620e-62 1.0000e+00 hypermethylated 1.2413e-60 1.0000e+00 hypermethylated 6.2139e-15 1.0000e+00 hypermethylated 3.2705e-13 1.0000e+00 hypermethylated 0.20158980 6.8899e-04 hypermethylated 7.4085e-03 hypermethylated 0.899308 0.8879295 0.02091916 23 0.8530697 0.8414983 0.0115715 5.4761e-02 8.8151e-01 insignificant 4.2124e-01 1.0000e+00 insignificant 3.2220e-01 9.6661e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00887302 7.3786e-01 insignificant 1.0000e+00 insignificant 0.9132712 0.6325317 0.2644635 23 0.8825368 0.6031674 0.2793694 2.2636e-46 1.0000e+00 hypermethylated 1.4148e-44 1.0000e+00 hypermethylated 8.5175e-15 1.0000e+00 hypermethylated 6.0839e-13 1.0000e+00 hypermethylated 0.21810248 4.4323e-04 hypermethylated 5.3401e-03 hypermethylated 0.9130712 0.8879295 0.04071891 23 0.8724462 0.8414983 0.03094793 1.6676e-03 9.8955e-01 weaklyHypermeth 1.8950e-02 1.0000e+00 weaklyHypermeth 7.8740e-03 9.9925e-01 weaklyHypermeth 1.1412e-01 1.0000000 insignificant 2.5386e-02 3.5400e-01 insignificant 1.00000000 insignificant 0.6325317 0.8879089 -0.2348975 23 0.6031674 0.8356278 -0.2324605 1.0000e+00 7.3765e-17 hypomethylated 1.0000e+00 2.3795e-15 hypomethylated 1.0000e+00 6.1484e-07 hypomethylated 1.0000e+00 1.8083e-05 hypomethylated -0.1927168 8.3933e-04 weaklyHypometh 1.4725e-02 weaklyHypometh chr16 86757350 86758350 49543 ENSG00000205037 0.780113 180 7 0.696844 153 7 0.649166 114 7 0.780251 143 7 0.7515173 89 7 0.732396 295 7 0.666949 118 7 0.712475 166 7 0.6360064 132 7 0.788698 78 5 0.749245 254 7 0.761364 63 5 0.7432570 122 7 0.9380952 30 3 0.7332094 116 7 0.7000000 41 4 0.640000 128 5 0.799513 149 6 0.756519 138 5 0.7266338 197 7 0.740584 50 5 0.722807 50 4 0.712330 155 7 0.641667 72 6 0.827160 83 4 0.7406337 246 7 0.6615337 113 6 0.801289 64 3 0.653571 108 5 0.7599403 211 7 0.732969 222 7 0.750448 292 7 0.6125007 162 7 0.5078762 138 7 0.4539366 183 7 0.646284 55 5 0.575015 146 6 0.7227920 217 7 0.748348 251 7 0.7686643 225 7 0.7874150 215 7 0.7943866 182 5 0.782083 181 7 0.8413499 0.726783 0.7082497 0.848459 0.8041560 0.804826 0.742950 0.7957388 0.6788395 0.8421884 0.8020396 0.810771 0.7680778 0.781983 0.7528422 0.8516669 0.746133 0.843956 0.7960589 0.7553997 0.795949 0.827232 0.782228 0.6745652 0.7569898 0.7817233 0.758602 0.877051 0.790479 0.8187334 0.7971382 0.7991505 0.6917451 0.55868004 0.72580246 0.64654150 0.658909 0.7744630 0.8226160 0.838791 0.8479814 0.8532153 0.8498619 4 0.733925 0.7599040 -0.00740252 7 0.7335635 0.7343727 -0.00080926 0.6104884 2.5585e-01 insignificant 1.00000 1.0000e+00 insignificant 0.3720685 2.3212e-01 insignificant 1.00000 1.0000e+00 insignificant 0.00836809 0.7097933 insignificant 1.00000 insignificant 0.733925 0.6648169 1.0688e-01 7 0.7335635 0.6112768 0.12228668 6.4769e-09 9.2475e-01 weaklyHypermeth 4.8335e-08 1.0000e+00 weaklyHypermeth 5.4617e-06 8.9983e-01 weaklyHypermeth 5.6306e-05 1.0000e+00 weaklyHypermeth 0.15071171 1.0224e-02 weaklyHypermeth 7.5180e-02 weaklyHypermeth 0.733925 0.7713472 -0.04390672 7 0.7335635 0.7726849 -0.0391214 9.9743e-01 6.0770e-03 weaklyHypometh 1.0000e+00 1.5992e-01 insignificant 9.7979e-01 2.8269e-03 weaklyHypometh 1.0000e+00 1.4542e-01 insignificant -0.03906681 3.3536e-02 weaklyHypometh 4.1917e-01 insignificant 0.7599040 0.6648169 0.1165157 7 0.7343727 0.6112768 0.1230959 8.5734e-07 9.4567e-01 weaklyHypermeth 6.1559e-06 1.0000e+00 weaklyHypermeth 5.4533e-05 9.7566e-01 weaklyHypermeth 5.2945e-04 1.0000e+00 weaklyHypermeth 0.14234362 1.3180e-02 weaklyHypermeth 9.2816e-02 weaklyHypermeth 0.7599040 0.7713472 -0.03889386 7 0.7343727 0.7726849 -0.03831216 9.9964e-01 1.6277e-02 weaklyHypometh 1.0000e+00 4.5703e-01 insignificant 9.9954e-01 2.6369e-02 weaklyHypometh 1.0000e+00 0.8155981 insignificant -4.7435e-02 1.9833e-02 weaklyHypometh 0.41318979 insignificant 0.6648169 0.7713472 -0.1710654 7 0.6112768 0.7726849 -0.1614081 9.9875e-01 1.8876e-05 weaklyHypometh 1.0000e+00 1.6133e-04 weaklyHypometh 9.9997e-01 6.0730e-06 weaklyHypometh 1.0000e+00 1.3802e-04 weaklyHypometh -0.1897785 4.2910e-03 weaklyHypometh 4.1259e-02 weaklyHypometh chr16 86824650 86825650 49544 ENSG00000205037 0.942956 144 5 0.776027 99 6 0.861715 137 6 0.800490 172 5 0.9682540 95 6 0.894789 146 4 0.936955 129 6 0.895212 80 6 0.8172258 78 6 0.941558 90 6 0.897812 176 6 0.887681 85 6 0.8746656 143 6 NA 0 0 0.8548230 116 6 0.8605769 80 6 0.772801 83 6 0.793238 238 5 0.967718 123 6 0.8197777 173 6 0.690705 77 6 0.799916 75 5 0.731992 119 6 0.948413 87 6 1.000000 35 3 0.9004630 82 6 0.8155952 85 6 0.835180 77 6 0.840511 77 6 0.9830963 139 6 0.960565 116 6 0.902082 133 6 0.8688763 107 6 0.9112057 129 6 1.0000000 78 3 0.837302 28 3 0.771825 47 4 0.9861111 93 6 0.908700 145 4 0.7832016 143 6 0.6924585 203 5 0.5727416 195 5 0.866327 210 6 0.9034840 0.867596 0.8952064 0.912362 0.9581652 0.958926 0.950860 0.9021213 0.9090053 0.9834177 0.9375813 0.900090 0.9423424 NA 0.8572567 0.8016080 0.801384 0.896638 0.9718227 0.9099965 0.658619 0.901420 0.827148 0.9330105 0.9752587 0.8416510 0.887514 0.880105 0.918210 0.9716711 0.9644678 0.9197451 0.9329524 0.94742080 1.00000000 0.81167608 0.673393 0.9642185 0.9290120 0.806088 0.7983597 0.6538862 0.9354541 3 0.882279 0.8738657 0.00615976 6 0.8656667 0.8574219 0.00824481 0.2457367 3.6838e-01 insignificant 1.00000 1.0000e+00 insignificant 0.7382060 5.7081e-01 insignificant 1.00000 1.0000e+00 insignificant 0.00442743 0.8913517 insignificant 1.00000 insignificant 0.882279 0.8962656 -1.4577e-02 6 0.8656667 0.8839570 -0.01829031 8.7318e-01 2.2847e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.5890e-01 8.1068e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02408268 5.5468e-01 lowCoverage 1.0000e+00 lowCoverage 0.882279 0.8337054 0.09436838 5 0.8656667 0.7507559 0.1149108 1.1010e-03 9.1291e-01 weaklyHypermeth 1.4298e-02 1.0000e+00 weaklyHypermeth 5.8773e-02 8.3482e-01 insignificant 5.2949e-01 1.0000e+00 insignificant 0.10711814 1.5321e-01 insignificant 9.3492e-01 insignificant 0.8738657 0.8962656 -0.0163564 6 0.8574219 0.8839570 -0.0265351 8.7010e-01 3.4274e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6400e-01 2.6207e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02851011 5.4658e-01 lowCoverage 1.0000e+00 lowCoverage 0.8738657 0.8337054 0.08604906 5 0.8574219 0.7507559 0.10666598 8.5626e-03 8.2800e-01 weaklyHypermeth 8.0024e-02 1.0000e+00 weaklyHypermeth 3.3336e-02 9.1275e-01 weaklyHypermeth 3.2960e-01 1.0000000 insignificant 1.0269e-01 1.7725e-01 insignificant 1.00000000 insignificant 0.8962656 0.8337054 0.1090283 5 0.8839570 0.7507559 0.1332011 6.5859e-03 9.1018e-01 weaklyHypermeth 1.4635e-01 1.0000e+00 insignificant 2.9993e-02 9.9396e-01 weaklyHypermeth 6.1210e-01 1.0000e+00 insignificant 0.1312008 1.0714e-01 lowCoverage 4.6183e-01 lowCoverage chr16 86849750 86850750 49549 ENSG00000205037 0.257239 186 9 0.306772 245 10 0.448774 309 10 0.243564 139 6 0.3459150 173 12 0.410525 181 10 0.304637 166 12 0.247544 186 9 0.2446789 83 9 0.352940 152 9 0.344149 130 9 0.535806 132 9 0.3409392 107 9 0.1399802 152 9 0.4425334 161 12 0.1410935 185 9 NA 0 0 0.282673 237 9 0.790820 183 5 0.3673908 141 9 0.180556 72 8 0.023810 39 3 0.099679 268 12 0.039444 112 8 0.321429 22 3 0.2929960 175 10 0.3124783 182 8 0.350595 49 8 0.195353 193 9 0.6148506 191 6 0.516201 193 6 0.517991 125 10 0.3666573 268 10 0.0686303 282 9 0.7421727 142 6 0.150000 20 4 0.326140 166 6 0.1403082 221 10 0.117594 399 9 0.0683801 401 9 0.2051548 255 9 0.0653264 328 9 0.060183 234 9 0.3520146 0.367414 0.3923453 0.252612 0.3795589 0.275116 0.354803 0.2643807 0.3649518 0.3676452 0.3072489 0.678350 0.4163817 0.148570 0.4233425 0.0635359 NA 0.290690 0.7572581 0.2743096 0.273020 0.260382 0.121121 0.0451197 0.3833004 0.2733755 0.320377 0.361721 0.274263 0.5916125 0.4483117 0.4967559 0.1976170 0.03684756 0.58784837 0.16421745 0.300322 0.0433904 0.0302260 0.053856 0.1165532 0.0804269 0.0708827 1 0.345964 0.3092593 0.07075476 9 0.3583237 0.2533057 0.10501804 0.0005602 1.0000e+00 weaklyHypermeth 0.28010 1.0000e+00 insignificant 0.0048400 9.9997e-01 weaklyHypermeth 1.00000 1.0000e+00 insignificant 0.05584832 0.3995963 insignificant 1.00000 insignificant 0.345751 0.2390511 1.5702e-01 9 0.3105472 0.3621517 -0.05160452 7.9378e-05 3.3909e-01 weaklyHypermeth 4.1343e-04 1.0000e+00 weaklyHypermeth 4.7907e-03 4.7797e-01 weaklyHypermeth 2.8687e-02 1.0000e+00 weaklyHypermeth 0.04564550 6.8102e-01 insignificant 1.0000e+00 insignificant 0.348801 0.0743494 0.27103660 9 0.3237083 0.0872501 0.2364583 1.9870e-15 1.0000e+00 hypermethylated 1.4193e-13 1.0000e+00 hypermethylated 3.9226e-12 1.0000e+00 hypermethylated 7.8452e-10 1.0000e+00 hypermethylated 0.24130254 3.7723e-05 hypermethylated 6.2872e-03 hypermethylated 0.3090685 0.2378774 0.0991797 9 0.2352124 0.3165911 -0.0813787 4.0787e-02 2.7167e-04 weaklyHypermeth 1.5276e-01 1.0449e-02 weaklyHypermeth 1.4577e-01 2.3999e-01 insignificant 5.6720e-01 1.0000e+00 insignificant -0.01020282 9.3122e-01 insignificant 1.0000e+00 insignificant 0.3126954 0.0743494 0.24039619 9 0.2674700 0.0945209 0.17294914 3.6272e-09 1.0000e+00 hypermethylated 1.7272e-07 1.0000e+00 hypermethylated 1.7825e-05 9.9823e-01 hypermethylated 8.1025e-04 1.0000000 hypermethylated 1.8545e-01 9.1599e-03 weaklyHypermeth 0.26941020 insignificant 0.2343173 0.0742574 0.1203397 9 0.2995843 0.0810179 0.2185664 1.2269e-04 1.0000e+00 weaklyHypermeth 4.3819e-03 1.0000e+00 weaklyHypermeth 9.9533e-03 1.0000e+00 weaklyHypermeth 2.8547e-01 1.0000e+00 insignificant 0.1956570 1.1134e-01 insignificant 4.7612e-01 insignificant chr16 86906550 86907550 49554 ENSG00000205037 0.865439 413 13 0.747701 304 11 0.771984 233 12 0.855003 500 11 0.7551057 146 8 0.811078 443 13 0.728037 244 13 0.777792 322 11 0.5757444 263 12 0.815198 341 11 0.802005 331 16 0.725725 194 11 0.4946432 407 13 0.7581174 127 6 0.7136161 356 11 0.8678096 165 10 0.684346 133 8 0.608159 514 14 0.765593 299 16 0.7683245 314 16 0.660092 155 13 0.646675 157 7 0.844930 217 13 0.596204 100 7 0.820012 226 9 0.7704305 484 15 0.5863715 126 11 0.616851 117 8 0.802832 419 14 0.7626834 504 16 0.814762 419 16 0.870912 378 13 0.5856001 349 13 0.6035916 314 16 0.4285714 252 5 0.419005 211 9 0.572591 208 10 0.5585445 487 14 0.757145 471 13 0.7638989 440 13 0.7105259 581 11 0.7291966 457 11 0.685972 462 16 0.8869793 0.755519 0.6283454 0.873187 0.6740605 0.816629 0.747932 0.7916409 0.7477742 0.8349657 0.7843848 0.724543 0.4424996 0.707093 0.7170926 0.8173760 0.727483 0.600531 0.7768273 0.7164410 0.809674 0.528487 0.855943 0.6579183 0.7060170 0.7618256 0.638355 0.621074 0.801784 0.6820760 0.7822912 0.7758060 0.5076962 0.41587799 0.42398178 0.32460944 0.463630 0.3438064 0.7732743 0.735208 0.7438859 0.6224750 0.7214991 4 0.730400 0.7571169 -0.03066692 13 0.7691299 0.7589025 0.01022738 0.9733690 5.6031e-02 insignificant 1.00000 6.7734e-01 insignificant 0.7856689 8.0636e-01 insignificant 1.00000 1.0000e+00 insignificant 0.01184148 0.7511401 insignificant 1.00000 insignificant 0.730356 0.4928571 2.6292e-01 11 0.7563037 0.5634645 0.19283929 3.1726e-24 2.1162e-01 hypermethylated 5.4700e-23 1.0000e+00 hypermethylated 3.0754e-11 3.0951e-01 hypermethylated 7.2135e-10 1.0000e+00 hypermethylated 0.21658721 3.4115e-04 hypermethylated 4.2117e-03 hypermethylated 0.730285 0.7984239 -0.00845203 13 0.7466750 0.7095220 0.0371530 1.9982e-02 1.4700e-01 inconclusive 1.7528e-01 1.0000e+00 insignificant 5.7472e-02 2.3512e-01 insignificant 5.2917e-01 1.0000e+00 insignificant 0.01522346 5.6137e-01 insignificant 1.0000e+00 insignificant 0.7570433 0.4928571 0.2936181 11 0.7455082 0.5634645 0.1820437 7.2708e-19 7.3218e-01 hypermethylated 1.1186e-17 1.0000e+00 hypermethylated 2.4240e-07 4.8947e-01 hypermethylated 3.7874e-06 1.0000e+00 hypermethylated 0.20474574 5.9591e-04 hypermethylated 6.7717e-03 hypermethylated 0.7576585 0.7984239 0.02562439 13 0.7761967 0.7095220 0.06667467 1.6874e-05 5.2838e-01 weaklyHypermeth 3.3086e-04 1.0000e+00 weaklyHypermeth 3.5962e-02 1.9888e-01 weaklyHypermeth 3.4250e-01 1.0000000 insignificant 3.3820e-03 9.2071e-01 insignificant 1.00000000 insignificant 0.4942085 0.7984239 -0.1855258 11 0.6130642 0.7095220 -0.0964579 7.9075e-01 3.5250e-10 weaklyHypometh 1.0000e+00 5.5953e-09 weaklyHypometh 8.3402e-01 9.5481e-04 weaklyHypometh 1.0000e+00 9.6446e-03 weaklyHypometh -0.2013638 1.0116e-03 weaklyHypometh 1.6316e-02 weaklyHypometh chr16 86906750 86907750 49555 ENSG00000205037 0.865439 413 13 0.747701 304 11 0.771984 233 12 0.855003 500 11 0.7551057 146 8 0.811078 443 13 0.728037 244 13 0.777792 322 11 0.5757444 263 12 0.815198 341 11 0.802005 331 16 0.725725 194 11 0.4946432 407 13 0.7581174 127 6 0.7136161 356 11 0.8678096 165 10 0.684346 133 8 0.608159 514 14 0.765593 299 16 0.7683245 314 16 0.660092 155 13 0.646675 157 7 0.844930 217 13 0.596204 100 7 0.820012 226 9 0.7704305 484 15 0.5863715 126 11 0.616851 117 8 0.802832 419 14 0.7626834 504 16 0.814762 419 16 0.870912 378 13 0.5856001 349 13 0.6035916 314 16 0.4285714 252 5 0.419005 211 9 0.572591 208 10 0.5585445 487 14 0.757145 471 13 0.7638989 440 13 0.7105259 581 11 0.7291966 457 11 0.685972 462 16 0.8869793 0.755519 0.6283454 0.873187 0.6740605 0.816629 0.747932 0.7916409 0.7477742 0.8349657 0.7843848 0.724543 0.4424996 0.707093 0.7170926 0.8173760 0.727483 0.600531 0.7768273 0.7164410 0.809674 0.528487 0.855943 0.6579183 0.7060170 0.7618256 0.638355 0.621074 0.801784 0.6820760 0.7822912 0.7758060 0.5076962 0.41587799 0.42398178 0.32460944 0.463630 0.3438064 0.7732743 0.735208 0.7438859 0.6224750 0.7214991 4 0.730400 0.7571169 -0.03066692 13 0.7691299 0.7589025 0.01022738 0.9733690 5.6031e-02 insignificant 1.00000 6.7734e-01 insignificant 0.7856689 8.0636e-01 insignificant 1.00000 1.0000e+00 insignificant 0.01184148 0.7511401 insignificant 1.00000 insignificant 0.730356 0.4928571 2.6292e-01 11 0.7563037 0.5634645 0.19283929 3.1726e-24 2.1162e-01 hypermethylated 5.4700e-23 1.0000e+00 hypermethylated 3.0754e-11 3.0951e-01 hypermethylated 7.2135e-10 1.0000e+00 hypermethylated 0.21658721 3.4115e-04 hypermethylated 4.2117e-03 hypermethylated 0.730285 0.7984239 -0.00845203 13 0.7466750 0.7095220 0.0371530 1.9982e-02 1.4700e-01 inconclusive 1.7528e-01 1.0000e+00 insignificant 5.7472e-02 2.3512e-01 insignificant 5.2917e-01 1.0000e+00 insignificant 0.01522346 5.6137e-01 insignificant 1.0000e+00 insignificant 0.7570433 0.4928571 0.2936181 11 0.7455082 0.5634645 0.1820437 7.2708e-19 7.3218e-01 hypermethylated 1.1186e-17 1.0000e+00 hypermethylated 2.4240e-07 4.8947e-01 hypermethylated 3.7874e-06 1.0000e+00 hypermethylated 0.20474574 5.9591e-04 hypermethylated 6.7717e-03 hypermethylated 0.7576585 0.7984239 0.02562439 13 0.7761967 0.7095220 0.06667467 1.6874e-05 5.2838e-01 weaklyHypermeth 3.3086e-04 1.0000e+00 weaklyHypermeth 3.5962e-02 1.9888e-01 weaklyHypermeth 3.4250e-01 1.0000000 insignificant 3.3820e-03 9.2071e-01 insignificant 1.00000000 insignificant 0.4942085 0.7984239 -0.1855258 11 0.6130642 0.7095220 -0.0964579 7.9075e-01 3.5250e-10 weaklyHypometh 1.0000e+00 5.5953e-09 weaklyHypometh 8.3402e-01 9.5481e-04 weaklyHypometh 1.0000e+00 9.6446e-03 weaklyHypometh -0.2013638 1.0116e-03 weaklyHypometh 1.6316e-02 weaklyHypometh chr16 87068450 87069450 49558 ZFPM1 ENSG00000179588 0.894029 403 11 0.807448 194 8 0.893171 286 8 0.932243 400 11 0.8435142 156 11 0.917299 390 8 0.827176 262 11 0.963510 299 9 0.9309252 198 11 0.910089 202 8 0.858062 342 11 0.779598 99 5 0.7907258 209 8 0.9401678 192 8 0.7133900 239 8 0.7995098 112 8 0.016949 177 1 0.918858 705 8 0.811540 487 8 0.9106435 425 11 0.886645 137 7 0.885887 228 8 0.769251 237 8 0.837290 141 8 0.829821 503 11 0.9033437 350 11 0.5833690 212 12 0.802776 164 6 0.839762 342 8 0.9249605 380 8 0.954930 306 8 0.945085 346 8 0.7445281 257 8 0.7734966 392 11 0.6607143 273 10 0.780797 159 4 0.614283 226 9 0.8339702 413 11 0.901414 398 11 0.8612017 296 8 0.9201346 367 8 0.8276746 454 8 0.936831 233 8 0.8464714 0.878248 0.8166843 0.834081 0.9164956 0.935402 0.836561 0.8945148 0.8463144 0.8259512 0.8712660 0.763011 0.8520148 0.813304 0.8468443 0.6617835 NA 0.819514 0.9158195 0.8485631 0.878266 0.764143 0.889472 0.9451056 0.8753915 0.8928989 0.733352 0.730221 0.925516 0.9128840 0.9144073 0.9379798 0.5934922 0.49445054 0.62897635 0.68624270 0.710853 0.7236557 0.8527270 0.874691 0.8059183 0.8484151 0.8429082 8 0.853730 0.8902184 -0.03668644 8 0.7616733 0.7544179 0.00725540 0.7627587 6.2557e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9506799 6.3989e-01 insignificant 1.00000 1.0000e+00 insignificant -0.02398428 0.6573861 insignificant 1.00000 insignificant 0.853502 0.6858639 1.6872e-01 8 0.7318824 0.6264358 0.10544659 1.5456e-06 9.9930e-01 weaklyHypermeth 9.7206e-06 1.0000e+00 weaklyHypermeth 6.1741e-03 9.8225e-01 weaklyHypermeth 3.6106e-02 1.0000e+00 weaklyHypermeth 0.08831090 1.2976e-01 insignificant 5.6914e-01 insignificant 0.853896 0.9056064 -0.02106508 8 0.7982143 0.8188496 -0.0206353 9.9281e-01 4.4771e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.1973e-01 7.0506e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.06650880 1.8929e-01 insignificant 1.0000e+00 insignificant 0.8904192 0.6854651 0.1972801 8 0.7595797 0.5895867 0.1699930 2.4552e-06 9.8297e-01 weaklyHypermeth 1.6153e-05 1.0000e+00 weaklyHypermeth 1.8524e-03 9.9795e-01 weaklyHypermeth 1.2432e-02 1.0000e+00 weaklyHypermeth 0.11229519 2.5894e-02 weaklyHypermeth 1.5886e-01 insignificant 0.8932010 0.9056064 0.00964981 8 0.8573991 0.8188496 0.03854954 8.1023e-01 4.8024e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.9410e-01 8.8648e-01 insignificant 1.0000e+00 1.0000000 insignificant -4.2525e-02 2.4657e-01 insignificant 1.00000000 insignificant 0.6866978 0.9056064 -0.1608217 8 0.7197159 0.8188496 -0.0991337 9.7655e-01 1.4563e-04 weaklyHypometh 1.0000e+00 1.1033e-03 weaklyHypometh 9.6192e-01 1.0362e-02 weaklyHypometh 1.0000e+00 6.9540e-02 weaklyHypometh -0.1548197 4.1522e-03 weaklyHypometh 4.0482e-02 weaklyHypometh chr16 87085250 87086250 49559 ZFPM1 ENSG00000179588 0.959579 214 7 0.933291 108 5 0.918254 106 7 0.916040 237 7 0.9805764 112 7 0.935989 347 7 0.938025 114 7 0.979592 83 7 0.9285714 20 0 0.977026 99 7 0.874547 129 7 0.823129 31 4 0.9337121 45 4 0.9761905 51 4 0.9751553 106 7 1.0000000 44 4 NA 0 0 0.836073 564 7 0.964156 132 7 0.9155844 187 7 0.929464 95 7 0.991597 71 4 0.857644 93 7 0.983193 73 5 0.964286 62 4 0.8850340 147 7 0.9121599 89 7 0.853896 54 4 0.884772 184 7 0.9271919 133 7 0.972291 183 7 0.953300 261 7 0.9278912 87 7 0.9457704 214 7 0.9398496 111 7 0.750000 20 4 0.936630 84 7 0.9393939 160 7 0.982262 221 7 0.9108207 150 7 0.9158352 206 7 0.9223723 628 7 0.975390 163 7 0.9375657 0.943405 0.9583100 0.906758 0.9849993 0.936443 0.959868 0.9687875 0.9789916 0.9648386 0.8566608 0.726090 0.9351218 0.962885 0.9605407 0.9929904 NA 0.951725 0.9612223 0.9293536 0.912865 0.987148 0.912133 0.9950568 0.9894958 0.8919568 0.912190 0.776738 0.855166 0.9178159 0.9638220 0.9597501 0.9045618 0.94021638 0.98230871 0.76307111 0.937729 0.9664502 0.9721639 0.925658 0.9362023 0.9334438 0.9621213 3 0.938783 0.9252078 0.01361637 7 0.9378933 0.9256857 0.01220754 0.2196309 9.5966e-01 insignificant 1.00000 1.0000e+00 insignificant 0.2513554 9.2068e-01 insignificant 1.00000 1.0000e+00 insignificant 0.00879006 0.6248017 insignificant 1.00000 insignificant 0.938783 0.9289941 5.7066e-03 7 0.9378933 0.9296222 0.00827109 7.7868e-02 6.9169e-02 insignificant 2.7810e-01 1.0000e+00 insignificant 1.5454e-01 1.5986e-01 insignificant 6.1083e-01 1.0000e+00 insignificant 0.02843664 4.2444e-01 insignificant 1.0000e+00 insignificant 0.938783 0.9415205 -0.00514401 7 0.9378933 0.9370068 0.0008865 5.3722e-01 3.4475e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.8661e-01 8.9992e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00631021 7.4776e-01 insignificant 1.0000e+00 insignificant 0.9252078 0.9289941 -0.0039597 7 0.9256857 0.9296222 -0.0039365 3.9826e-01 5.9273e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 5.3592e-01 1.0855e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01964658 5.8502e-01 insignificant 1.0000e+00 insignificant 0.9252078 0.9415205 -0.01548544 7 0.9256857 0.9370068 -0.01132104 6.1273e-01 2.4504e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.0181e-01 7.5942e-01 insignificant 1.0000e+00 1.0000000 insignificant -1.5100e-02 4.8288e-01 insignificant 1.00000000 insignificant 0.9289941 0.9415205 -0.0073197 7 0.9296222 0.9370068 -0.0073846 2.6400e-01 5.8087e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.9717e-01 8.0126e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0347468 3.5311e-01 insignificant 1.0000e+00 insignificant chr16 87093350 87094350 49560 ZFPM1 ENSG00000179588 0.836232 374 17 0.806776 388 17 0.782444 422 20 0.858884 324 14 0.8600820 209 17 0.852973 485 19 0.817907 449 21 0.717421 295 16 0.7717037 305 20 0.861010 370 21 0.885970 581 21 0.690486 298 16 0.7589729 452 20 0.8333333 6 1 0.8320281 381 20 0.7739043 185 13 0.598306 228 13 0.845385 400 18 0.865008 396 20 0.8373745 495 20 0.848954 293 18 0.674030 171 13 0.884882 398 20 0.771892 190 15 0.886806 124 10 0.8234879 397 18 0.7219082 298 20 0.777966 190 15 0.829983 349 19 0.7942790 449 21 0.892289 407 18 0.923891 570 20 0.6524270 365 17 0.5909491 480 20 0.8154189 404 15 0.689372 192 12 0.687867 279 20 0.7418768 431 20 0.829790 435 17 0.8287141 465 20 0.7531109 407 18 0.6986773 429 18 0.803307 373 16 0.8720020 0.776845 0.7830116 0.885157 0.9025090 0.877107 0.841222 0.8222137 0.7868139 0.9003247 0.8720731 0.679933 0.7880563 NA 0.8358876 0.7544475 0.607269 0.829067 0.9163714 0.8422537 0.872854 0.716505 0.863431 0.8394146 0.8186020 0.8462513 0.818578 0.885520 0.873033 0.8196396 0.8838972 0.9283766 0.7079501 0.71027802 0.88341056 0.76666424 0.773368 0.7396886 0.8290894 0.846591 0.7570329 0.7056373 0.8425469 9 0.804629 0.8391554 -0.02927996 19 0.7743130 0.7818626 -0.00754953 0.8732391 8.6034e-02 insignificant 1.00000 8.1164e-01 insignificant 0.9609866 8.0885e-02 insignificant 1.00000 9.5159e-01 insignificant -0.01488727 0.5831572 insignificant 1.00000 insignificant 0.804601 0.7080428 9.2706e-02 20 0.7645006 0.6673023 0.09719822 1.0169e-16 6.7712e-01 weaklyHypermeth 1.1743e-15 1.0000e+00 weaklyHypermeth 2.8797e-05 2.6081e-01 weaklyHypermeth 2.6179e-04 1.0000e+00 weaklyHypermeth 0.10799146 1.5757e-02 weaklyHypermeth 1.0647e-01 insignificant 0.804715 0.7809388 0.02742644 18 0.7992506 0.7925802 0.0066703 2.4250e-03 9.1014e-01 weaklyHypermeth 3.0077e-02 1.0000e+00 weaklyHypermeth 3.4201e-02 9.4776e-01 weaklyHypermeth 3.4546e-01 1.0000e+00 insignificant 0.02159008 4.8993e-01 insignificant 1.0000e+00 insignificant 0.8397704 0.7080428 0.1239244 19 0.8049870 0.6673023 0.1376847 3.6685e-11 9.9795e-01 weaklyHypermeth 3.6322e-10 1.0000e+00 weaklyHypermeth 5.0076e-04 9.7469e-01 weaklyHypermeth 3.9122e-03 1.0000e+00 weaklyHypermeth 0.12287873 9.1460e-03 weaklyHypermeth 6.7748e-02 weaklyHypermeth 0.8397285 0.7809388 0.05311193 17 0.7961228 0.7925802 0.00354256 1.0877e-03 9.9165e-01 weaklyHypermeth 1.2949e-02 1.0000e+00 weaklyHypermeth 1.0642e-02 9.9166e-01 weaklyHypermeth 1.4003e-01 1.0000000 insignificant 3.6477e-02 2.9690e-01 insignificant 1.00000000 insignificant 0.7079070 0.7809388 -0.0335849 17 0.6521797 0.7925802 -0.1404005 1.8882e-01 1.2280e-05 weaklyHypometh 1.0000e+00 1.0678e-04 weaklyHypometh 2.3464e-01 4.2104e-02 weaklyHypometh 1.0000e+00 2.2860e-01 insignificant -0.0864014 6.0361e-02 insignificant 3.0485e-01 insignificant chr16 87101950 87102950 49561 ZFPM1 ENSG00000179588 0.771117 394 14 0.585756 224 14 0.751037 239 16 0.818278 259 14 0.7615737 172 16 0.661417 439 14 0.634026 231 16 0.661816 344 16 0.7515259 198 16 0.783771 231 16 0.779016 553 17 0.536975 99 10 0.8176168 370 17 0.9332912 105 9 0.7727156 282 17 0.6547521 113 10 0.759249 89 8 0.744400 332 14 0.815577 522 17 0.6915479 357 15 0.826237 203 13 0.752153 216 14 0.772500 242 14 0.786587 201 16 0.847185 127 12 0.7781251 354 16 0.7137582 281 15 0.560351 97 7 0.757267 387 16 0.7354059 319 16 0.760604 336 14 0.809194 522 14 0.6865725 212 16 0.7393091 304 17 0.6124166 259 9 0.749376 64 3 0.669592 203 16 0.6862400 411 14 0.558842 249 8 0.6791668 253 14 0.8564747 240 14 0.6570210 210 7 0.757184 243 14 0.7302365 0.601451 0.7239554 0.749780 0.7499406 0.676044 0.698634 0.7665677 0.7639782 0.7574308 0.7319393 0.666873 0.7695550 0.747424 0.6700144 0.7397839 0.734034 0.719240 0.7740859 0.6894097 0.778077 0.694326 0.725846 0.7673778 0.7805220 0.6691641 0.723033 0.645991 0.684006 0.7045941 0.7171061 0.7404314 0.5901638 0.65563441 0.61517964 0.67113330 0.680655 0.6266616 0.6564270 0.701926 0.7942582 0.7383338 0.7241429 4 0.764769 0.7618176 0.00786703 15 0.7240053 0.7356299 -0.01162460 0.4191881 5.4384e-01 insignificant 1.00000 1.0000e+00 insignificant 0.6954518 1.7628e-01 insignificant 1.00000 1.0000e+00 insignificant -0.02400760 0.4201355 insignificant 1.00000 insignificant 0.764769 0.6659780 9.2450e-02 16 0.7240053 0.6463715 0.07763382 9.4027e-09 9.4875e-01 weaklyHypermeth 6.9650e-08 1.0000e+00 weaklyHypermeth 7.1705e-03 1.0773e-01 weaklyHypermeth 4.0742e-02 1.0000e+00 weaklyHypermeth 0.04368856 1.4968e-01 insignificant 6.3155e-01 insignificant 0.764960 0.6669456 -0.00949166 14 0.7364501 0.7116844 0.0247657 4.6416e-01 2.6216e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.7641e-01 1.3088e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03253531 5.7118e-01 insignificant 1.0000e+00 insignificant 0.7617307 0.6655196 0.0866898 15 0.7321818 0.6140529 0.1181288 3.6468e-06 9.9789e-01 weaklyHypermeth 2.2936e-05 1.0000e+00 weaklyHypermeth 1.7151e-02 8.0712e-01 weaklyHypermeth 8.9328e-02 1.0000e+00 weaklyHypermeth 0.06769617 3.6211e-02 weaklyHypermeth 2.0343e-01 insignificant 0.7615995 0.6669456 -0.02792153 14 0.7209427 0.7116844 0.00925832 6.4674e-01 5.5927e-02 insignificant 1.0000e+00 9.2915e-01 insignificant 9.1791e-01 1.8368e-01 insignificant 1.0000e+00 1.0000000 insignificant 5.6543e-02 3.4076e-01 insignificant 1.00000000 insignificant 0.6666667 0.6669456 -0.1293971 14 0.6637625 0.7116844 -0.0479219 9.9501e-01 2.5598e-04 weaklyHypometh 1.0000e+00 1.8027e-03 weaklyHypometh 9.5082e-01 2.3655e-02 weaklyHypometh 1.0000e+00 1.3741e-01 insignificant -0.0111533 8.4392e-01 insignificant 1.0000e+00 insignificant chr16 87116850 87117850 49562 ZFPM1 ENSG00000179588 0.730168 359 17 0.621297 311 21 0.736855 256 16 0.719284 455 16 0.6868384 149 12 0.801313 352 19 0.780801 113 11 0.762616 343 19 0.7452998 266 17 0.827017 383 18 0.842434 453 20 0.743487 144 12 0.6749879 525 18 0.7665955 268 14 0.7424538 193 18 0.7116883 89 10 0.670833 109 5 0.875625 582 14 0.806617 340 18 0.7928019 333 17 0.758868 180 13 0.766382 277 16 0.881099 210 17 0.768052 233 17 0.873664 387 19 0.7917814 431 18 0.7262668 262 19 0.674786 124 12 0.828636 386 15 0.7537597 340 19 0.901078 278 15 0.822901 449 16 0.3599205 354 19 0.4385383 398 20 0.5617721 244 11 0.653220 128 10 0.302909 292 20 0.5670910 478 20 0.711247 200 15 0.6986855 382 19 0.7891857 370 14 0.8239554 362 14 0.733265 375 18 0.8824683 0.730613 0.8044475 0.893913 0.9190328 0.906956 0.853751 0.9251783 0.8880518 0.8724221 0.9050838 0.818082 0.8909782 0.866069 0.8617497 0.7851173 0.851322 0.858266 0.9059017 0.9141984 0.929712 0.800784 0.877461 0.9330110 0.9040195 0.9228412 0.871259 0.847884 0.882255 0.8023991 0.9180726 0.9108107 0.4070072 0.44002840 0.53674681 0.56972188 0.343570 0.5160266 0.8546670 0.848485 0.8391390 0.8347391 0.7974445 5 0.861033 0.8745782 -0.01009295 18 0.6656760 0.6981518 -0.03247579 0.9692173 3.7564e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9836004 3.5836e-01 insignificant 1.00000 1.0000e+00 insignificant -0.04365553 0.0834619 insignificant 1.00000 insignificant 0.861033 0.5131996 3.5653e-01 18 0.6656760 0.4109037 0.25477236 5.1869e-59 1.0000e+00 hypermethylated 2.7299e-57 1.0000e+00 hypermethylated 3.3565e-13 1.0000e+00 hypermethylated 1.3964e-11 1.0000e+00 hypermethylated 0.27137559 3.6714e-03 weaklyHypermeth 3.1380e-02 weaklyHypermeth 0.861449 0.8448786 0.03255212 16 0.6822719 0.6739663 0.0083056 2.7424e-02 8.9320e-01 weaklyHypermeth 2.2853e-01 1.0000e+00 insignificant 1.3841e-01 9.6759e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00068293 9.8101e-01 insignificant 1.0000e+00 insignificant 0.8745782 0.5131996 0.3624283 20 0.6981518 0.4109037 0.2872482 1.1569e-39 1.0000e+00 hypermethylated 5.5089e-38 1.0000e+00 hypermethylated 4.7271e-13 1.0000e+00 hypermethylated 2.4879e-11 1.0000e+00 hypermethylated 0.31503112 1.4772e-03 weaklyHypermeth 1.5715e-02 weaklyHypermeth 0.8751057 0.8448786 0.03881409 16 0.7174076 0.6739663 0.04344128 1.4577e-02 9.2146e-01 weaklyHypermeth 1.2676e-01 1.0000e+00 insignificant 1.2375e-01 9.5303e-01 insignificant 9.0327e-01 1.0000000 insignificant 4.4338e-02 1.8275e-01 insignificant 1.00000000 insignificant 0.5135135 0.8448786 -0.3509011 16 0.4045397 0.6739663 -0.2694266 1.0000e+00 7.4157e-14 hypomethylated 1.0000e+00 1.8539e-12 hypomethylated 1.0000e+00 9.6966e-06 hypomethylated 1.0000e+00 2.0201e-04 hypomethylated -0.2706927 3.0941e-03 weaklyHypometh 3.3622e-02 weaklyHypometh chr16 87356850 87357850 49567 ENSG00000182376 0.753442 159 8 0.575702 161 8 0.736904 154 8 0.671338 180 8 0.6272978 117 8 0.659141 226 8 0.435037 128 5 0.639734 178 8 0.5170681 151 8 0.545969 138 8 0.729088 234 8 0.687500 39 5 0.2916667 38 4 0.7011485 100 8 0.5633929 82 7 0.6230519 55 7 0.000000 1 0 0.563161 277 8 0.527684 238 8 0.5878736 194 8 0.611565 50 6 0.292659 48 2 0.642058 135 8 0.581597 67 7 0.523758 196 3 0.5921124 199 8 0.6120715 96 5 0.465278 65 7 0.596255 163 8 0.5719282 255 8 0.551968 220 8 0.823323 211 8 0.7976892 188 8 0.8739938 151 8 0.3478261 96 2 0.553165 115 3 0.687051 203 8 0.8719269 219 8 0.633281 232 8 0.6695685 192 8 0.6676646 293 6 0.6445971 81 6 0.585908 147 8 0.7218382 0.454451 0.6511670 0.631380 0.5662757 0.595423 0.552096 0.5456286 0.4843120 0.5528512 0.7025875 0.628099 0.3948745 0.648337 0.5038371 0.5430074 NA 0.556384 0.4900896 0.5272447 0.749739 0.304726 0.668404 0.5969467 0.6385712 0.5822521 0.582021 0.528466 0.498490 0.4789044 0.5408818 0.7894927 0.8405136 0.80930479 0.62874705 0.63621638 0.833605 0.8139622 0.5498390 0.581631 0.6316526 0.5895862 0.4627378 1 0.596140 0.5596007 0.00781249 8 0.5649712 0.5523942 0.01257699 0.7703654 8.7429e-01 insignificant 1.00000 1.0000e+00 insignificant 0.7889477 1.3448e-01 insignificant 1.00000 1.0000e+00 insignificant -0.00023777 0.9964160 insignificant 1.00000 insignificant 0.596485 0.7816684 -2.2528e-01 8 0.5794093 0.7284671 -0.14905780 9.8533e-01 1.6831e-14 hypomethylated 1.0000e+00 1.6831e-12 hypomethylated 9.9931e-01 8.2600e-06 hypomethylated 1.0000e+00 5.9000e-04 hypomethylated -0.11679870 2.4822e-01 insignificant 8.9991e-01 insignificant 0.596695 0.4391534 0.03948578 8 0.6518354 0.6303706 0.0214648 8.3229e-02 5.5511e-01 insignificant 5.9449e-01 1.0000e+00 insignificant 2.5984e-01 8.2943e-02 insignificant 1.0000e+00 9.3195e-01 insignificant -0.06839394 1.1483e-01 insignificant 7.9194e-01 insignificant 0.5613208 0.7808642 -0.2217510 8 0.5576337 0.6556204 -0.0979867 9.9622e-01 9.6885e-08 hypomethylated 1.0000e+00 8.0738e-06 hypomethylated 9.9905e-01 4.0247e-04 hypomethylated 1.0000e+00 2.3675e-02 hypomethylated -0.11656093 2.4498e-01 insignificant 8.6872e-01 insignificant 0.5627219 0.4391534 0.03999212 8 0.6345421 0.6303706 0.00417145 2.2848e-01 5.7755e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.8485e-01 4.0565e-01 insignificant 1.0000e+00 1.0000000 insignificant -6.8156e-02 9.7771e-02 insignificant 0.80537172 insignificant 0.7824742 0.4391534 0.3223041 8 0.8195255 0.6303706 0.1891548 2.4731e-09 9.7948e-01 hypermethylated 2.2483e-07 1.0000e+00 hypermethylated 3.3208e-04 9.0057e-01 hypermethylated 1.8449e-02 1.0000e+00 hypermethylated 0.0484048 5.9596e-01 insignificant 1.0000e+00 insignificant chr16 87363950 87364950 49570 ENSG00000182376 0.592981 464 18 0.184752 818 19 0.269243 903 19 0.452074 478 18 0.1436607 679 19 0.411239 870 19 0.258021 870 19 0.172752 744 18 0.3353731 792 19 0.387324 636 18 0.464658 696 18 0.407709 511 19 0.1034192 633 18 0.4169776 439 13 0.2955410 745 18 0.5099217 280 18 0.029949 193 6 0.449454 529 18 0.135091 937 21 0.0964531 837 19 0.491645 401 19 0.276405 386 17 0.459014 497 19 0.361011 506 19 0.457317 186 19 0.3455093 992 19 0.3407307 642 19 0.406777 281 14 0.330187 839 19 0.0759739 1243 19 0.071585 1127 19 0.692507 800 19 0.7176557 528 19 0.9198400 615 21 0.7373837 264 12 0.432178 187 8 0.689988 401 18 0.4454357 1101 19 0.303222 619 18 0.2806270 676 19 0.1783417 435 18 0.2751966 850 19 0.381232 420 18 0.5506664 0.189057 0.2916280 0.399967 0.1694466 0.427264 0.229044 0.1979168 0.2554649 0.3461181 0.4183725 0.394794 0.0314533 0.394194 0.2460517 0.5269741 0.174092 0.439110 0.0322417 0.1049521 0.522422 0.304673 0.524530 0.2766412 0.4956820 0.3406381 0.351883 0.424068 0.279586 0.0867387 0.0793807 0.6871287 0.7427447 0.94440304 0.72861373 0.42296443 0.744654 0.4706150 0.3606465 0.270164 0.1498103 0.2325195 0.3982795 18 0.260556 0.2996582 -0.03950960 19 0.3443141 0.3331312 0.01118289 0.9913007 2.4922e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9989196 3.4962e-02 weaklyHypometh 1.00000 7.1350e-01 insignificant -0.05322545 0.3918498 insignificant 1.00000 insignificant 0.260463 0.6466408 -3.8669e-01 19 0.3040200 0.6072159 -0.30319596 1.0000e+00 2.0609e-45 hypomethylated 1.0000e+00 6.8696e-43 hypomethylated 1.0000e+00 9.6299e-22 hypomethylated 1.0000e+00 4.8150e-19 hypomethylated -0.35125051 3.8393e-03 weaklyHypometh 3.2263e-02 weaklyHypometh 0.260520 0.2376667 -0.01696944 18 0.3144367 0.2818378 0.0325988 8.5151e-01 5.1400e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.7910e-01 7.1760e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02210585 6.5361e-01 insignificant 1.0000e+00 insignificant 0.2997970 0.6474774 -0.3425850 19 0.3628062 0.6336166 -0.2708105 1.0000e+00 6.4372e-25 hypomethylated 1.0000e+00 1.6093e-22 hypomethylated 1.0000e+00 2.9741e-14 hypomethylated 1.0000e+00 1.4871e-11 hypomethylated -0.29802505 9.2280e-03 weaklyHypometh 6.7853e-02 weaklyHypometh 0.2997842 0.2377459 0.02343653 18 0.3638931 0.2940916 0.06980149 7.2874e-01 8.8132e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.1436e-01 9.9791e-01 insignificant 1.0000e+00 1.0000000 insignificant 7.5331e-02 2.2181e-01 insignificant 1.00000000 insignificant 0.6468498 0.2377459 0.3659688 18 0.6336166 0.2940916 0.3395250 1.2046e-19 1.0000e+00 hypermethylated 6.0228e-17 1.0000e+00 hypermethylated 3.7761e-12 1.0000e+00 hypermethylated 1.8881e-09 1.0000e+00 hypermethylated 0.3733564 3.1604e-03 weaklyHypermeth 3.3622e-02 weaklyHypermeth chr16 87367550 87368550 49571 ENSG00000182376 0.793664 161 6 0.671586 267 10 0.523269 116 9 0.509924 228 9 0.5640158 126 10 0.678324 249 9 0.694064 196 10 0.692830 91 8 0.6504026 104 9 0.706061 63 6 0.848208 246 8 0.568585 86 6 0.4493056 105 8 0.6297795 82 5 0.8063853 85 6 0.6458333 49 5 0.493615 45 3 0.587614 232 6 0.516527 281 9 0.6448312 198 8 0.815148 141 9 0.536059 138 6 0.624353 205 10 0.608333 90 8 0.776273 153 9 0.7877031 229 10 0.4705566 128 7 0.574405 59 6 0.615176 228 8 0.6086959 225 10 0.555889 312 10 0.783079 299 10 0.3235759 235 9 0.5540736 164 9 0.4572751 246 10 0.471140 91 5 0.357540 170 9 0.4220476 296 10 0.515476 168 8 0.5516550 268 10 0.5787202 190 8 0.4150073 265 7 0.505816 176 8 0.8591192 0.623176 0.6710813 0.779557 0.7410784 0.826811 0.828676 0.7520654 0.6604470 0.9092593 0.8490412 0.626173 0.7347222 0.834172 0.9081109 0.8459484 0.723325 0.779793 0.7242174 0.7592786 0.867913 0.644876 0.804767 0.7282828 0.8315318 0.8020301 0.722291 0.779013 0.782862 0.7307831 0.7066860 0.8771662 0.6169188 0.63277349 0.79366843 0.67474860 0.709240 0.6529353 0.6475730 0.680059 0.6875588 0.6482438 0.6987473 2 0.701894 0.7041232 0.00205079 10 0.6488018 0.5523847 0.09641706 0.5351627 8.0135e-01 insignificant 1.00000 1.0000e+00 insignificant 0.5047217 5.9789e-01 insignificant 1.00000 1.0000e+00 insignificant -0.01256489 0.7624480 insignificant 1.00000 insignificant 0.701562 0.4546211 1.4525e-01 10 0.5718787 0.3812088 0.19066985 3.9039e-10 9.9994e-01 weaklyHypermeth 3.1232e-09 1.0000e+00 weaklyHypermeth 4.6302e-06 9.9406e-01 weaklyHypermeth 4.8231e-05 1.0000e+00 weaklyHypermeth 0.20279914 5.4008e-04 hypermethylated 6.0008e-03 hypermethylated 0.701795 0.5791940 0.13591883 9 0.6195352 0.4418358 0.1776994 9.4709e-10 9.2880e-01 weaklyHypermeth 3.6580e-08 1.0000e+00 weaklyHypermeth 5.1241e-05 9.5240e-01 weaklyHypermeth 1.5071e-03 1.0000e+00 weaklyHypermeth 0.12040636 7.5249e-03 weaklyHypermeth 1.6359e-01 insignificant 0.7044424 0.4550000 0.1833643 10 0.5984168 0.4129762 0.1854405 1.1828e-06 9.9763e-01 weaklyHypermeth 8.2716e-06 1.0000e+00 weaklyHypermeth 2.2693e-05 9.8688e-01 weaklyHypermeth 2.4373e-04 1.0000e+00 weaklyHypermeth 0.21536402 5.0063e-04 hypermethylated 5.8898e-03 hypermethylated 0.7044424 0.5791940 0.17070562 9 0.5984168 0.4418358 0.15658096 1.1228e-03 9.9252e-01 weaklyHypermeth 1.3210e-02 1.0000e+00 weaklyHypermeth 3.2444e-03 9.9907e-01 weaklyHypermeth 5.8990e-02 1.0000000 weaklyHypermeth 1.3297e-01 8.5361e-03 weaklyHypermeth 0.26919047 insignificant 0.4550000 0.5791940 0.0190012 9 0.4129762 0.4418358 -0.0288596 5.5729e-01 5.1936e-02 insignificant 1.0000e+00 2.1550e-01 insignificant 7.0501e-01 2.2515e-02 inconclusive 1.0000e+00 1.3178e-01 insignificant -0.0823928 9.3170e-02 insignificant 4.1740e-01 insignificant chr16 87372150 87373150 49572 ENSG00000182376 0.920368 270 8 0.791501 278 10 0.802844 216 12 0.949331 316 8 0.8595525 153 10 0.891760 272 8 0.891958 105 9 0.890420 196 10 0.9108127 129 9 0.921557 205 9 0.797448 427 10 0.831169 50 5 0.8315855 172 10 0.8645136 136 10 0.8181974 170 9 0.8571429 48 6 0.500000 5 0 0.945572 451 10 0.838375 365 9 0.8698054 246 9 0.793651 101 10 0.904762 65 5 0.842882 218 8 0.762929 105 10 0.963636 95 8 0.8475290 361 10 0.7557398 214 10 0.750000 81 7 0.905835 312 9 0.8731272 352 10 0.882541 324 10 0.864718 349 10 0.9050117 193 11 0.8405767 231 10 0.9230769 187 10 0.712500 34 6 0.750567 100 10 0.7361410 487 10 0.823366 236 8 0.9408129 343 10 0.9142701 307 8 0.8223209 252 8 0.766536 238 10 0.8684835 0.753807 0.7487600 0.927973 0.8482710 0.938935 0.824979 0.8912802 0.8838011 0.9025072 0.8911036 0.842910 0.8629795 0.861501 0.8700741 0.7975533 NA 0.917768 0.8575579 0.8747664 0.935336 0.917637 0.950933 0.9367718 0.9456558 0.9087373 0.791010 0.940085 0.889551 0.8590891 0.9257239 0.9377213 0.9254277 0.84437054 1.00000000 0.80736378 0.880630 0.8548171 0.9104972 0.922320 0.8788805 0.8346336 0.8695868 5 0.879572 0.9071401 -0.03202307 10 0.8718777 0.8228533 0.04902438 0.9399721 2.9217e-02 weaklyHypometh 1.00000 4.5651e-01 insignificant 0.9930851 6.5150e-03 weaklyHypometh 1.00000 3.3219e-01 insignificant 0.00358308 0.9020067 insignificant 1.00000 insignificant 0.879544 0.8781478 -1.0115e-02 10 0.8633362 0.7824393 0.08089690 2.2501e-01 2.0815e-03 weaklyHypometh 7.3055e-01 5.6256e-02 weaklyHypometh 5.0133e-01 6.7114e-04 weaklyHypometh 1.0000e+00 2.3143e-02 weaklyHypometh 0.03788346 3.9943e-01 insignificant 1.0000e+00 insignificant 0.879572 0.8960756 -0.01300847 8 0.8718777 0.8103731 0.0615046 8.1352e-01 1.3542e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.9865e-01 2.1103e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00426543 9.1473e-01 insignificant 1.0000e+00 insignificant 0.9064327 0.8774351 0.0241915 10 0.8129327 0.7335369 0.0793958 1.9170e-01 1.9269e-01 insignificant 6.3477e-01 1.0000e+00 insignificant 4.5326e-01 5.4402e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03430038 4.3704e-01 insignificant 1.0000e+00 insignificant 0.9071401 0.8960756 0.01972870 8 0.8228533 0.8103731 0.01248023 7.1785e-02 6.3431e-01 insignificant 4.8561e-01 1.0000e+00 insignificant 1.4443e-01 9.7366e-01 insignificant 1.0000e+00 1.0000000 insignificant -7.8485e-03 8.4079e-01 insignificant 1.00000000 insignificant 0.8781478 0.8960000 -0.0050896 8 0.7824393 0.7977313 -0.0152920 1.1614e-01 6.5612e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.8952e-01 9.1416e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0421489 4.1310e-01 insignificant 1.0000e+00 insignificant chr16 87464650 87465650 49574 PABPN1L ENSG00000205022 0.885325 468 8 0.806264 259 8 0.822389 173 8 0.917603 484 8 0.9390491 167 7 0.939051 425 8 0.861199 130 8 0.924195 187 8 0.9003551 144 8 0.812863 165 8 0.903223 296 8 0.771605 41 5 0.9049962 190 8 0.8911064 125 8 0.9288191 112 7 0.7500000 26 2 0.833333 5 0 0.784408 722 8 0.921146 243 8 0.9247422 420 8 0.905257 120 7 0.889557 128 7 0.835283 270 8 0.762840 131 7 0.817653 143 8 0.8904513 318 8 0.7756215 229 8 0.787963 68 8 0.889426 343 8 0.9119958 359 8 0.915668 360 8 0.923712 431 8 0.2786638 293 8 0.3474663 302 8 0.2975292 427 7 0.416667 15 1 0.275034 217 8 0.3749171 419 8 0.842002 272 8 0.7166877 369 8 0.7956898 421 8 0.8138355 375 7 0.692097 312 8 0.8741414 0.874625 0.8403124 0.911657 0.8994735 0.916698 0.837069 0.8971085 0.9130699 0.8867860 0.8967792 0.657619 0.9101678 0.875439 0.9131496 0.6289939 0.910176 0.787820 0.9236856 0.9072293 0.868701 0.881908 0.925222 0.9543383 0.8480860 0.8767820 0.864116 0.762378 0.897120 0.9098216 0.9015536 0.9262425 0.2695034 0.43309869 0.34951576 0.16695072 0.326141 0.3042618 0.7730640 0.775129 0.7656518 0.7940279 0.7473400 6 0.879967 0.8995859 -0.02270470 8 0.8714933 0.8556467 0.01584662 0.9149947 2.2161e-01 insignificant 1.00000 1.0000e+00 insignificant 0.7845944 7.4514e-01 insignificant 1.00000 1.0000e+00 insignificant 0.01229798 0.5789918 insignificant 1.00000 insignificant 0.879967 0.2916916 5.9348e-01 8 0.8714933 0.2745425 0.59695079 4.6786e-66 1.0000e+00 hypermethylated 3.8988e-64 1.0000e+00 hypermethylated 8.2857e-14 1.0000e+00 hypermethylated 3.7662e-12 1.0000e+00 hypermethylated 0.53937083 1.5843e-08 hypermethylated 5.2811e-07 hypermethylated 0.879916 0.7895941 0.09304749 8 0.8457920 0.7778754 0.0679166 7.2698e-09 9.9978e-01 weaklyHypermeth 2.4233e-07 1.0000e+00 weaklyHypermeth 5.0333e-08 9.9998e-01 weaklyHypermeth 4.5758e-06 1.0000e+00 weaklyHypermeth 0.09902120 2.1422e-02 weaklyHypermeth 3.2457e-01 insignificant 0.8995859 0.2916916 0.6014348 8 0.8556467 0.2745425 0.5811042 1.3430e-48 1.0000e+00 hypermethylated 8.9536e-47 1.0000e+00 hypermethylated 9.1183e-13 1.0000e+00 hypermethylated 4.5592e-11 1.0000e+00 hypermethylated 0.52707286 3.2853e-09 hypermethylated 2.6141e-07 hypermethylated 0.8998273 0.7895941 0.11694061 8 0.8767761 0.7778754 0.09890069 5.8396e-10 1.0000e+00 weaklyHypermeth 3.2442e-08 1.0000e+00 weaklyHypermeth 4.6937e-06 1.0000e+00 weaklyHypermeth 2.7610e-04 1.0000000 weaklyHypermeth 8.6723e-02 3.6251e-02 weaklyHypermeth 0.47078916 insignificant 0.2922156 0.7895941 -0.4954603 8 0.3294510 0.7778754 -0.4484243 1.0000e+00 5.5947e-21 hypomethylated 1.0000e+00 2.5430e-19 hypomethylated 9.9999e-01 6.9928e-08 hypomethylated 1.0000e+00 3.0403e-06 hypomethylated -0.4403496 1.9748e-06 hypomethylated 2.5046e-04 hypomethylated chr16 87514950 87515950 49576 PABPN1L ENSG00000205022 0.910000 36 4 0.717249 53 5 0.824327 146 5 0.333333 5 0 0.9248854 135 5 0.761364 40 4 0.930976 223 5 0.674084 56 5 0.8561703 113 5 0.937179 95 5 0.929038 237 5 0.963778 178 5 0.9283135 141 5 NA 0 0 0.9588997 157 5 0.8681347 210 5 0.838095 116 5 0.400000 12 0 0.744352 165 5 0.7333333 23 2 0.915717 74 5 0.875000 8 0 0.899945 115 5 0.930476 57 4 0.983333 22 1 0.9209640 96 5 0.8464499 67 5 0.901282 55 5 0.876316 84 4 0.9208995 112 4 0.717227 84 5 1.000000 24 3 0.0322251 200 5 0.1170381 155 5 0.0000000 22 4 0.000000 17 1 0.201515 67 5 0.0181818 84 5 0.933333 14 0 0.7933333 25 4 0.6250000 5 0 0.6366667 23 3 0.400000 13 0 0.9270833 0.722890 0.6812004 0.542756 0.9228598 0.742661 0.874587 0.6803743 0.8577154 0.9568643 0.8752442 0.939545 0.9204634 NA 0.9240351 0.8521451 0.866567 0.333333 0.7565885 0.7569444 0.834847 0.883583 0.918919 0.9203373 0.9791667 0.8570384 0.845959 0.905404 0.863487 0.9406140 0.7344625 1.0000000 0.0344736 0.01222440 0.00000000 NA 0.037879 0.0094697 0.9236111 0.767361 0.6276042 0.6513889 0.4375000 0 0.851004 0.8820577 -0.03061578 5 0.9032258 0.9311272 -0.02790136 0.9990359 2.5884e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9999986 1.1561e-02 weaklyHypometh 1.00000 4.1288e-01 insignificant -0.09720366 0.0432150 lowCoverage 1.00000 lowCoverage 0.851004 0.0276753 8.2484e-01 5 0.9032258 0.1232347 0.77999114 4.2630e-59 1.0000e+00 hypermethylated 2.3684e-57 1.0000e+00 hypermethylated 7.5360e-15 1.0000e+00 hypermethylated 3.7680e-13 1.0000e+00 hypermethylated 0.74027049 1.3138e-11 lowCoverage 8.7586e-10 lowCoverage 0.848859 0.6875000 0.16262380 0 0.8458064 0.6760676 0.1697388 1.5430e-05 9.9986e-01 noCoverage 2.8054e-04 1.0000e+00 noCoverage 8.8469e-02 8.9134e-01 noCoverage 7.1346e-01 1.0000e+00 noCoverage 0.12409717 2.5567e-01 lowCoverage 1.0000e+00 lowCoverage 0.8822055 0.0293578 0.8575819 5 0.9380144 0.1442445 0.7937699 2.4148e-45 1.0000e+00 hypermethylated 1.4205e-43 1.0000e+00 hypermethylated 2.4474e-11 1.0000e+00 hypermethylated 8.4394e-10 1.0000e+00 hypermethylated 0.83747414 4.7492e-09 lowCoverage 2.7937e-07 lowCoverage 0.8807107 0.6875000 0.19309653 0 0.8760289 0.6760676 0.19996126 1.4003e-05 9.9907e-01 noCoverage 2.8577e-04 1.0000e+00 noCoverage 1.2132e-02 9.8777e-01 noCoverage 1.5164e-01 1.0000000 noCoverage 2.2130e-01 6.7435e-02 lowCoverage 0.69520915 lowCoverage 0.0209125 0.6875000 -0.6656680 0 0.0218224 0.6760676 -0.6542452 1.0000e+00 4.2374e-14 noCoverage 1.0000e+00 1.0865e-12 noCoverage 1.0000e+00 1.3723e-06 noCoverage 1.0000e+00 3.5188e-05 noCoverage -0.6161733 1.2368e-03 lowCoverage 1.7925e-02 lowCoverage chr16 87549850 87550850 49577 CBFA2T3 ENSG00000129993 0.922769 140 5 0.886037 139 5 0.882445 97 5 0.911562 158 5 0.9050292 49 5 0.939284 212 5 0.923636 66 5 0.845483 93 5 0.8625000 90 5 0.909206 131 5 0.910238 117 5 0.854545 73 4 0.9414109 175 5 0.9378788 120 4 0.9385580 131 5 0.8000000 35 1 0.882707 38 2 0.856954 220 5 0.954762 72 5 0.9079000 125 5 0.883164 87 5 0.843374 108 5 0.843190 116 5 0.905995 88 5 0.927060 82 5 0.9494945 123 5 0.7720840 96 5 0.842828 110 5 0.939123 76 5 0.9162103 138 5 0.891818 114 5 0.949434 122 5 0.8029490 124 5 0.5903743 61 5 0.4626866 67 1 0.725000 29 2 0.651346 137 5 0.6759176 126 5 0.790635 154 5 0.9255372 176 5 0.8932883 184 5 0.9056566 111 5 0.905714 165 5 0.9172266 0.852869 0.8835874 0.909168 0.9144218 0.943351 0.899413 0.8646165 0.8839214 0.9210061 0.9026703 0.885997 0.9416357 0.934528 0.9409824 0.8750000 0.829918 0.837603 0.9394681 0.9068983 0.862913 0.813104 0.844534 0.9073011 0.9469243 0.9451834 0.788813 0.882291 0.947080 0.9025950 0.8795455 0.9554227 0.8240526 0.61654735 NA 0.71790995 0.641646 0.7064688 0.7881048 0.905459 0.8738079 0.8785068 0.8928859 5 0.905743 0.8920635 0.01250838 5 0.9052105 0.8912890 0.01392154 0.2486676 9.3313e-01 insignificant 1.00000 1.0000e+00 insignificant 0.2187778 9.3737e-01 insignificant 1.00000 1.0000e+00 insignificant 0.00999717 0.5849185 lowCoverage 1.00000 lowCoverage 0.905743 0.6672794 2.0786e-01 5 0.9052105 0.6947597 0.21045085 6.2875e-14 1.0000e+00 hypermethylated 6.3510e-13 1.0000e+00 hypermethylated 1.9423e-06 9.9998e-01 hypermethylated 2.2165e-05 1.0000e+00 hypermethylated 0.24726631 3.1245e-03 lowCoverage 2.8149e-02 lowCoverage 0.905743 0.8708861 0.03187879 5 0.9052105 0.8880784 0.0171321 7.5978e-02 4.6519e-01 insignificant 5.4660e-01 1.0000e+00 insignificant 1.2522e-01 6.4846e-01 insignificant 9.4860e-01 1.0000e+00 insignificant 0.01447897 5.9444e-01 lowCoverage 1.0000e+00 lowCoverage 0.8920635 0.6672794 0.1988780 5 0.8912890 0.6947597 0.1965293 3.4237e-08 1.0000e+00 weaklyHypermeth 2.7389e-07 1.0000e+00 weaklyHypermeth 4.0246e-05 9.9969e-01 weaklyHypermeth 4.1191e-04 1.0000e+00 weaklyHypermeth 0.23726913 3.1027e-03 lowCoverage 2.9271e-02 lowCoverage 0.8920635 0.8708861 0.01584580 5 0.8912890 0.8880784 0.00321060 2.9026e-01 3.4560e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.3042e-01 2.5877e-01 insignificant 1.0000e+00 1.0000000 insignificant 4.4818e-03 8.7957e-01 insignificant 1.00000000 insignificant 0.6672794 0.8708861 -0.1784941 5 0.6947597 0.8880784 -0.1933187 9.9978e-01 8.5762e-05 weaklyHypometh 1.0000e+00 6.7529e-04 weaklyHypometh 9.9984e-01 1.0268e-03 weaklyHypometh 1.0000e+00 1.0067e-02 weaklyHypometh -0.2327873 3.0401e-03 lowCoverage 3.3408e-02 lowCoverage chr16 87586950 87587950 49578 CBFA2T3 ENSG00000129993 0.490421 137 6 0.413386 117 4 0.698056 128 4 0.556634 197 6 0.2234127 88 6 0.694774 184 5 0.585466 123 6 0.512225 108 7 0.4465608 159 8 0.707096 108 4 0.509182 144 6 0.793175 102 4 0.3006331 172 5 0.5649198 50 3 0.4329987 164 6 0.4214800 49 4 0.343628 78 4 0.421938 208 7 0.419613 127 8 0.3486383 169 6 0.677884 74 4 0.408313 171 4 0.481564 135 7 0.882784 79 5 0.501024 136 5 0.5220272 172 6 0.5517295 124 6 0.667463 59 4 0.479778 143 6 0.4369740 194 8 0.304362 218 8 0.672007 149 4 0.0000000 178 8 0.0519958 181 8 0.0101010 302 6 0.012500 90 8 0.029520 118 6 0.0192761 286 8 0.205716 262 8 0.3622406 234 8 0.2941922 249 5 0.3973717 227 8 0.448772 224 6 0.4925427 0.410923 0.6796020 0.487617 0.3865136 0.633931 0.592738 0.5292027 0.5047394 0.7649232 0.6859387 0.707304 0.3138960 0.612600 0.4607127 0.5827266 0.358161 0.419333 0.4012818 0.4900240 0.704664 0.416292 0.472988 0.7468421 0.5816103 0.5547957 0.741494 0.603551 0.514326 0.4764299 0.4054664 0.7052026 0.0000000 0.01926515 0.00620599 0.00921986 0.030053 0.0123552 0.2729083 0.334082 0.2827384 0.3098709 0.3523930 4 0.502680 0.5247884 -0.02426466 6 0.4376638 0.4417567 -0.00409293 0.9545368 2.6366e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9937210 8.5146e-02 insignificant 1.00000 9.6074e-01 insignificant -0.05461396 0.3356569 insignificant 1.00000 insignificant 0.502877 0.0173160 4.9145e-01 6 0.4845797 0.0174289 0.46715085 1.9218e-36 1.0000e+00 hypermethylated 4.8046e-35 1.0000e+00 hypermethylated 5.6222e-17 1.0000e+00 hypermethylated 4.0158e-15 1.0000e+00 hypermethylated 0.47364624 5.1949e-12 hypermethylated 4.3290e-10 hypermethylated 0.502877 0.3018395 0.20157482 6 0.4845797 0.3213324 0.1632473 7.4995e-07 9.9995e-01 hypermethylated 1.6666e-05 1.0000e+00 hypermethylated 1.0000e-06 9.9998e-01 hypermethylated 4.6409e-05 1.0000e+00 hypermethylated 0.15255338 1.8125e-02 weaklyHypermeth 2.8769e-01 insignificant 0.5254545 0.0173160 0.5133614 6 0.5105292 0.0174289 0.4931003 6.1031e-36 1.0000e+00 hypermethylated 2.1797e-34 1.0000e+00 hypermethylated 3.3832e-16 1.0000e+00 hypermethylated 2.8193e-14 1.0000e+00 hypermethylated 0.52826020 8.9424e-08 hypermethylated 3.3120e-06 hypermethylated 0.5254545 0.3018395 0.22554656 6 0.5105292 0.3213324 0.18919677 5.1376e-08 1.0000e+00 hypermethylated 1.8349e-06 1.0000e+00 hypermethylated 5.8073e-08 1.0000e+00 hypermethylated 9.4370e-06 1.0000000 hypermethylated 2.0717e-01 5.3532e-03 weaklyHypermeth 0.21412887 insignificant 0.0173160 0.3018395 -0.2971117 8 0.0174289 0.3213324 -0.3039036 1.0000e+00 2.2919e-21 hypomethylated 1.0000e+00 1.1459e-19 hypomethylated 1.0000e+00 1.9339e-09 hypomethylated 1.0000e+00 1.2893e-07 hypomethylated -0.3210929 1.3393e-03 weaklyHypometh 1.8786e-02 weaklyHypometh chr16 87596850 87597850 49579 CBFA2T3 ENSG00000129993 0.868572 672 21 0.785330 789 23 0.726926 1053 24 0.856539 655 20 0.7363762 345 16 0.834195 876 19 0.870647 347 16 0.783266 312 16 0.6758288 329 10 0.798644 351 16 0.827983 543 17 0.733362 262 10 0.4364467 358 10 0.7722538 303 11 0.8478617 377 13 0.8519650 215 10 0.869637 1969 6 0.796216 1173 20 0.742918 421 16 0.7402982 711 21 0.868075 143 15 0.669324 232 13 0.905320 567 20 0.899168 180 9 0.856124 561 17 0.8347187 727 23 0.6604650 317 16 0.751908 246 13 0.749866 438 17 0.7888191 817 23 0.779812 669 23 0.827733 783 21 0.3177569 904 24 0.1182619 521 17 0.4517232 482 18 0.279164 167 11 0.254003 522 17 0.3797421 871 23 0.774432 719 20 0.8219401 798 21 0.6987911 780 20 0.6532248 925 20 0.746806 833 21 0.8234372 0.696162 0.6731505 0.803875 0.7344676 0.872521 0.841894 0.7862610 0.6868576 0.8635830 0.8342368 0.709303 0.5144970 0.831914 0.8244093 0.8269786 0.859530 0.753579 0.7369690 0.7964315 0.858799 0.652645 0.859599 0.8886757 0.8136748 0.7809790 0.680675 0.727384 0.749974 0.7440963 0.6746774 0.8768268 0.1408738 0.15240215 0.23978759 0.34117025 0.308772 0.1410251 0.7062082 0.740249 0.6176083 0.5380184 0.6796720 10 0.823407 0.8135563 0.00353898 21 0.8281132 0.8115212 0.01659206 0.6226493 1.9562e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9559050 6.5270e-01 insignificant 1.00000 1.0000e+00 insignificant -0.02151448 0.5093476 insignificant 1.00000 insignificant 0.823183 0.3412172 5.2051e-01 21 0.8079111 0.3568242 0.45108686 3.4395e-114 1.0000e+00 hypermethylated 8.5987e-112 1.0000e+00 hypermethylated 6.8683e-28 1.0000e+00 hypermethylated 2.2894e-25 1.0000e+00 hypermethylated 0.47765484 2.5353e-05 hypermethylated 4.8756e-04 hypermethylated 0.823393 0.6688039 0.12892784 19 0.8151819 0.7402634 0.0749186 7.6636e-11 4.6457e-01 weaklyHypermeth 3.6494e-09 1.0000e+00 weaklyHypermeth 1.0210e-06 9.2662e-01 weaklyHypermeth 4.6409e-05 1.0000e+00 weaklyHypermeth 0.03872468 3.1775e-01 insignificant 1.0000e+00 insignificant 0.8133051 0.3413156 0.5097988 23 0.7897712 0.3700399 0.4197313 3.1977e-87 1.0000e+00 hypermethylated 6.3955e-85 1.0000e+00 hypermethylated 1.1055e-24 1.0000e+00 hypermethylated 2.7637e-22 1.0000e+00 hypermethylated 0.49916932 1.6394e-05 hypermethylated 3.6134e-04 hypermethylated 0.8140357 0.6688039 0.11411899 19 0.8315482 0.7402634 0.09128479 4.8859e-09 8.0462e-01 weaklyHypermeth 2.2208e-07 1.0000e+00 weaklyHypermeth 1.9437e-05 7.9278e-01 weaklyHypermeth 8.4509e-04 1.0000000 weaklyHypermeth 6.0239e-02 1.4159e-01 insignificant 0.99015280 insignificant 0.3417318 0.6688039 -0.4330056 19 0.3537949 0.7402634 -0.3864685 1.0000e+00 4.9801e-47 hypomethylated 1.0000e+00 1.2450e-44 hypomethylated 1.0000e+00 1.4687e-18 hypomethylated 1.0000e+00 7.3437e-16 hypomethylated -0.4389302 4.0741e-05 hypomethylated 1.6296e-03 hypomethylated chr16 87760250 87761250 49584 ENSG00000205015 0.899904 1111 19 0.810996 1147 22 0.712071 642 20 0.898850 1299 19 0.8961040 303 16 0.878799 1073 19 0.787430 217 12 0.864938 716 20 0.7478891 572 20 0.863916 792 20 0.883769 763 18 0.784294 243 17 0.8751221 1053 19 0.7687437 273 5 0.8141562 731 19 0.8136905 109 5 0.738664 137 12 0.840735 1676 19 0.907585 676 17 0.9206473 812 18 0.802231 252 16 0.789646 407 17 0.902382 844 20 0.870760 299 18 0.857112 278 19 0.8558196 1352 20 0.7218978 391 17 0.814827 313 16 0.856713 1112 19 0.9175757 1269 20 0.936720 1311 20 0.901079 1255 19 0.6374236 990 22 0.6876784 610 17 0.6963138 397 15 0.810163 225 17 0.654899 344 18 0.7229344 1405 20 0.911207 1039 19 0.8967249 1390 19 0.8951174 1360 19 0.8743288 1170 19 0.896523 1428 19 0.9113452 0.842237 0.7399308 0.891604 0.9181146 0.899689 0.867976 0.8978725 0.8063307 0.9154845 0.8896341 0.809297 0.9206313 NA 0.8837323 0.8186411 0.775153 0.838412 0.8915150 0.9388097 0.831825 0.849400 0.905703 0.9226828 0.8977268 0.9197988 0.826894 0.852607 0.904590 0.9374003 0.9454205 0.9060676 0.6798906 0.71637024 0.65332643 0.80237408 0.697450 0.7353524 0.9170165 0.908487 0.8955662 0.8913615 0.9016033 12 0.863069 0.8976109 -0.02672508 22 0.8343387 0.8578654 -0.02352678 0.9999968 4.4595e-04 weaklyHypometh 1.00000 4.1174e-02 weaklyHypometh 0.9949166 1.0140e-01 insignificant 1.00000 9.8445e-01 insignificant -0.01681495 0.4646009 insignificant 1.00000 insignificant 0.863069 0.7446487 1.2743e-01 22 0.8343387 0.6989178 0.13542086 1.4304e-32 1.0000e+00 weaklyHypermeth 3.1786e-31 1.0000e+00 weaklyHypermeth 3.4910e-13 9.9992e-01 weaklyHypermeth 1.3964e-11 1.0000e+00 weaklyHypermeth 0.13384654 1.3990e-03 weaklyHypermeth 1.3771e-02 weaklyHypermeth 0.882070 0.9027713 -0.02157102 19 0.8726632 0.8968515 -0.0241884 9.9707e-01 1.0681e-02 weaklyHypometh 1.0000e+00 2.2252e-01 insignificant 9.8166e-01 3.6189e-02 weaklyHypometh 1.0000e+00 6.3489e-01 insignificant -0.05936496 7.3005e-04 weaklyHypometh 3.8424e-02 weaklyHypometh 0.8976109 0.7446487 0.1538106 22 0.8578654 0.6989178 0.1589476 1.6284e-32 1.0000e+00 weaklyHypermeth 5.0889e-31 1.0000e+00 weaklyHypermeth 1.1594e-12 9.9999e-01 weaklyHypermeth 5.5212e-11 1.0000e+00 weaklyHypermeth 0.15066149 5.8751e-04 weaklyHypermeth 6.7717e-03 weaklyHypermeth 0.9075989 0.9027713 0.00518428 19 0.8977218 0.8968515 0.00087024 5.2839e-01 6.9657e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.0272e-01 2.7187e-01 insignificant 1.0000e+00 1.0000000 insignificant -4.2550e-02 4.0175e-02 weaklyHypometh 0.50218355 insignificant 0.7528380 0.9027713 -0.1514109 19 0.7281846 0.8968515 -0.1686669 1.0000e+00 1.3796e-19 weaklyHypometh 1.0000e+00 5.5184e-18 weaklyHypometh 1.0000e+00 7.7716e-11 weaklyHypometh 1.0000e+00 5.5511e-09 weaklyHypometh -0.1932115 4.1200e-04 weaklyHypometh 8.8346e-03 weaklyHypometh chr16 87999650 88000650 49604 ENSG00000210946 0.870002 705 14 0.748186 540 14 0.809147 362 14 0.844755 817 14 0.6793753 203 14 0.698297 865 15 0.844075 356 14 0.690205 494 14 0.7597377 372 13 0.807269 469 13 0.831373 576 14 0.730632 160 11 0.6999237 594 13 0.8207298 257 9 0.8410649 428 13 0.5547521 108 8 0.791026 77 6 0.732315 1069 14 0.727464 618 13 0.8218984 627 15 0.720722 231 15 0.739580 297 14 0.713405 378 14 0.772884 240 13 0.775968 408 15 0.6750741 740 14 0.7550038 296 14 0.781855 274 14 0.735939 604 14 0.7779663 760 14 0.832702 754 14 0.924295 813 14 0.5623090 567 14 0.7098247 384 14 0.5427922 333 7 0.571712 101 8 0.615269 481 15 0.7408737 790 15 0.734947 708 14 0.8054365 685 14 0.7771931 792 14 0.7074171 628 14 0.723984 739 14 0.8864498 0.829714 0.8051081 0.867626 0.8407917 0.821606 0.861207 0.8429679 0.8099725 0.8985301 0.9256768 0.822103 0.8266378 0.895464 0.8715097 0.6009721 0.874444 0.853118 0.8504618 0.8258988 0.861056 0.842536 0.814236 0.9187832 0.8437397 0.8402751 0.844299 0.844440 0.862692 0.8302085 0.8926637 0.9399205 0.5587865 0.71085666 0.60357992 0.57261571 0.660584 0.7180453 0.8655752 0.837821 0.7872592 0.7933306 0.8383861 12 0.839006 0.8440684 -0.01823645 14 0.7280525 0.7451186 -0.01706609 0.8750897 1.1407e-01 insignificant 1.00000 8.8429e-01 insignificant 0.9832089 5.7370e-02 insignificant 1.00000 9.1315e-01 insignificant -0.00200475 0.9374569 insignificant 1.00000 insignificant 0.839006 0.5892319 2.1381e-01 14 0.7280525 0.6277762 0.10027628 3.4048e-41 2.2987e-08 hypermethylated 1.0945e-39 1.4367e-06 hypermethylated 9.6761e-09 8.9195e-05 hypermethylated 1.8257e-07 4.2474e-03 hypermethylated 0.14131462 6.0740e-03 weaklyHypermeth 4.7207e-02 weaklyHypermeth 0.839509 0.7896367 0.03201561 14 0.7646272 0.7233787 0.0412485 3.7967e-05 4.2611e-01 weaklyHypermeth 6.3278e-04 1.0000e+00 weaklyHypermeth 2.3386e-03 7.6584e-02 weaklyHypermeth 4.4125e-02 8.9545e-01 weaklyHypermeth 0.01531587 5.5183e-01 insignificant 1.0000e+00 insignificant 0.8440684 0.5892319 0.2101597 14 0.7451186 0.6277762 0.1173424 7.0359e-25 8.3916e-05 hypermethylated 1.4359e-23 4.4166e-03 hypermethylated 9.6639e-08 9.2003e-03 hypermethylated 1.7257e-06 3.2858e-01 hypermethylated 0.14331937 5.7157e-03 weaklyHypermeth 4.7237e-02 weaklyHypermeth 0.8445059 0.7894144 0.06008208 14 0.7514211 0.6808270 0.07059407 1.0962e-04 6.4239e-01 weaklyHypermeth 1.6535e-03 1.0000e+00 weaklyHypermeth 3.7505e-03 7.9402e-01 weaklyHypermeth 6.4664e-02 1.0000000 weaklyHypermeth 1.7321e-02 5.1493e-01 insignificant 1.00000000 insignificant 0.5893665 0.7896367 -0.1860836 14 0.6357622 0.7233787 -0.0876165 5.7257e-05 2.8366e-11 weaklyHypometh 2.3543e-03 5.6731e-10 weaklyHypometh 8.9350e-03 3.3409e-04 weaklyHypometh 2.8547e-01 3.8848e-03 weaklyHypometh -0.1259987 1.2077e-02 weaklyHypometh 8.9457e-02 weaklyHypometh chr16 88077050 88078050 49616 ENSG00000210946 0.728728 130 7 0.627840 160 7 0.540476 68 7 0.680300 147 7 0.7095238 72 7 0.736058 114 7 0.734127 62 3 0.670578 146 7 0.5950957 91 7 0.600309 65 7 0.738027 178 7 0.600000 25 5 0.6465201 116 7 0.7571429 86 7 0.7055427 103 7 0.5285714 35 5 1.000000 2 0 0.671532 108 7 0.695181 89 7 0.6964286 59 7 0.678571 20 1 0.625000 7 0 0.708296 116 7 0.712121 83 5 0.916441 128 3 0.7004424 90 7 0.7502366 104 5 0.572737 55 5 0.546519 154 7 0.7386025 138 7 0.710504 120 7 0.779365 62 7 0.5060315 121 7 0.6628015 129 7 0.6503663 64 5 1.000000 2 0 0.534334 141 7 0.7021332 103 7 0.813187 115 7 0.8136054 100 7 0.7661741 129 5 0.7592732 68 3 0.786106 103 5 0.7918990 0.687696 0.5506242 0.806502 0.7202782 0.816379 0.690699 0.7455798 0.6923284 0.7078408 0.8041712 0.721464 0.6604725 0.719101 0.7618199 0.6146067 0.762799 0.794066 0.7575575 0.7782459 0.761236 0.531241 0.796351 0.7836227 0.9044076 0.7767121 0.760824 0.656468 0.767952 0.7944707 0.7884868 0.8659176 0.5711480 0.77028309 0.67286085 0.71517589 0.546711 0.7908994 0.8517718 0.903478 0.8702422 0.7990242 0.8367609 0 0.697297 0.7527881 -0.04468568 7 0.6552107 0.6799509 -0.02474027 0.6879487 4.0075e-02 weaklyHypometh 1.00000 5.7250e-01 insignificant 0.8712274 9.7411e-02 insignificant 1.00000 9.7997e-01 insignificant -0.02013725 0.5784192 insignificant 1.00000 insignificant 0.697297 0.6267857 6.8350e-02 7 0.6552107 0.5383279 0.11688276 6.1126e-04 9.6409e-01 weaklyHypermeth 3.0111e-03 1.0000e+00 weaklyHypermeth 1.4311e-01 8.4527e-01 insignificant 5.7243e-01 1.0000e+00 insignificant 0.00715463 9.2745e-01 insignificant 1.0000e+00 insignificant 0.697511 0.8466019 -0.11980053 5 0.6773836 0.7795934 -0.1022098 9.7365e-01 9.7501e-05 weaklyHypometh 1.0000e+00 1.0833e-02 weaklyHypometh 9.9525e-01 6.2620e-04 weaklyHypometh 1.0000e+00 5.6927e-02 weaklyHypometh -0.10457005 3.6313e-04 weaklyHypometh 2.2695e-02 weaklyHypometh 0.7527881 0.6267857 0.1090701 7 0.6799509 0.5383279 0.1416230 9.1581e-04 9.9660e-01 weaklyHypermeth 4.5791e-03 1.0000e+00 weaklyHypermeth 1.2006e-01 9.6803e-01 insignificant 4.9205e-01 1.0000e+00 insignificant 0.02729188 7.3487e-01 insignificant 1.0000e+00 insignificant 0.7532588 0.8466019 -0.06499356 5 0.7056582 0.7795934 -0.07393521 9.9345e-01 1.2843e-02 weaklyHypometh 1.0000e+00 4.1430e-01 insignificant 9.3375e-01 6.2547e-02 insignificant 1.0000e+00 1.0000000 insignificant -8.4433e-02 1.4354e-02 weaklyHypometh 0.35540117 insignificant 0.6279070 0.8466019 -0.1915073 5 0.6152319 0.7795934 -0.1643615 9.9982e-01 6.4176e-06 weaklyHypometh 1.0000e+00 5.8877e-05 weaklyHypometh 9.9918e-01 1.2345e-02 weaklyHypometh 1.0000e+00 8.0685e-02 weaklyHypometh -0.1117247 1.8311e-01 insignificant 6.8579e-01 insignificant chr16 88192150 88193150 49618 CPNE7 ENSG00000178773 0.895363 275 9 0.831937 199 9 0.866738 258 9 0.944553 406 8 0.7597114 154 9 0.885326 379 9 0.921605 275 9 0.915969 241 9 0.7934366 455 9 0.946087 658 9 0.922423 192 9 0.955401 346 9 0.9384714 319 9 0.9416110 190 8 0.9395241 359 9 0.9846206 279 7 0.837291 174 9 0.849236 555 9 0.933862 136 9 0.9052524 370 9 0.971742 88 9 0.911278 257 9 0.924254 343 9 0.966600 198 9 0.894006 223 8 0.9175676 227 9 0.8813363 180 9 0.928030 293 9 0.913772 184 9 0.8392634 287 9 0.897178 224 9 0.929207 316 9 0.8109608 168 9 0.7476048 219 8 0.6046998 137 6 0.593457 162 8 0.758714 203 9 0.8636447 190 9 0.845420 370 9 0.8412844 388 8 0.8685711 504 8 0.8874326 312 9 0.892710 375 9 0.8864186 0.849925 0.8610345 0.947426 0.9380501 0.897648 0.932038 0.9093189 0.9008173 0.9353473 0.9250802 0.951816 0.9295548 0.938103 0.9351354 0.9760801 0.955407 0.941056 0.9518519 0.9325297 0.957067 0.919238 0.930424 0.9588692 0.9153071 0.9187586 0.886182 0.930654 0.904992 0.9367825 0.9109783 0.9376327 0.8160204 0.74994464 0.68477905 0.64957893 0.895147 0.9076897 0.8671752 0.879659 0.8786013 0.8889371 0.9077368 8 0.920998 0.9216312 -0.00197279 9 0.7800441 0.8441406 -0.06409657 0.6619247 1.9959e-01 insignificant 1.00000 1.0000e+00 insignificant 0.8115384 4.1544e-01 insignificant 1.00000 1.0000e+00 insignificant -0.01609867 0.3411195 insignificant 1.00000 insignificant 0.921629 0.7877665 1.3331e-01 9 0.9012562 0.6335028 0.26775336 4.3459e-19 1.0000e+00 weaklyHypermeth 5.4323e-18 1.0000e+00 weaklyHypermeth 1.4662e-08 1.0000e+00 weaklyHypermeth 2.3844e-07 1.0000e+00 weaklyHypermeth 0.16857405 1.1474e-02 weaklyHypermeth 8.1795e-02 weaklyHypermeth 0.921727 0.8655721 0.04599406 9 0.9163502 0.8727667 0.0435835 3.4862e-07 9.9611e-01 weaklyHypermeth 8.7156e-06 1.0000e+00 weaklyHypermeth 2.5825e-05 9.9993e-01 weaklyHypermeth 8.0704e-04 1.0000e+00 weaklyHypermeth 0.03133751 7.8814e-02 insignificant 6.6231e-01 insignificant 0.9218750 0.7892293 0.1340269 9 0.9206163 0.7742812 0.1463351 9.1282e-13 1.0000e+00 weaklyHypermeth 1.0031e-11 1.0000e+00 weaklyHypermeth 5.6428e-08 1.0000e+00 weaklyHypermeth 1.0647e-06 1.0000e+00 weaklyHypermeth 0.18467271 8.1431e-03 weaklyHypermeth 6.2161e-02 weaklyHypermeth 0.9218750 0.8655721 0.04291804 9 0.9206163 0.8727667 0.04784966 4.7122e-06 9.9872e-01 weaklyHypermeth 1.0710e-04 1.0000e+00 weaklyHypermeth 1.3208e-04 9.9861e-01 weaklyHypermeth 4.4028e-03 1.0000000 weaklyHypermeth 4.7436e-02 7.6581e-03 weaklyHypermeth 0.25527066 insignificant 0.7892293 0.8655721 -0.0946541 9 0.7742812 0.8727667 -0.0984854 9.9996e-01 7.2946e-04 weaklyHypometh 1.0000e+00 4.6169e-03 weaklyHypometh 9.9995e-01 6.9555e-03 weaklyHypometh 1.0000e+00 4.8983e-02 weaklyHypometh -0.1372365 2.6774e-02 weaklyHypometh 1.6326e-01 insignificant chr16 88201550 88202550 49619 CPNE7 ENSG00000178773 0.934759 324 7 0.838219 280 7 0.836792 177 5 0.913753 286 7 0.9026592 91 6 0.760795 353 7 0.909372 168 7 0.906003 194 7 0.7942302 187 5 0.830080 137 5 0.890934 240 7 0.792857 57 4 0.9247384 157 5 1.0000000 9 1 0.8212903 108 5 0.8928571 43 5 0.936508 30 4 0.931262 348 5 0.857634 141 5 0.9425819 370 7 0.853125 58 7 0.735955 91 4 0.905554 254 6 0.919314 119 7 0.938419 65 4 0.9269151 367 7 0.8863476 84 5 0.923333 50 5 0.935408 189 5 0.8959450 294 7 0.937840 333 7 0.872865 414 7 0.6715278 244 7 0.6231361 118 5 0.6901531 494 6 0.791667 17 1 0.654971 147 7 0.6271680 336 7 0.807899 398 7 0.8165216 397 7 0.8164532 398 7 0.6896296 227 5 0.849009 441 7 0.9396001 0.884499 0.8853040 0.902682 0.9347794 0.914760 0.944803 0.9144051 0.8863250 0.9332927 0.8850437 0.852094 0.9170776 NA 0.9154621 0.8625654 0.922034 0.912098 0.9784666 0.9341722 0.988220 0.870138 0.922989 0.9438255 0.9318227 0.9251251 0.829645 0.945812 0.899249 0.8954565 0.9307819 0.9437122 0.7364031 0.92174802 0.76634254 0.77950835 0.866600 0.7203594 0.8709593 0.829590 0.8320380 0.6865038 0.9060777 4 0.910270 0.9206212 -0.01114086 7 0.7905156 0.8504803 -0.05996465 0.9153983 2.5946e-02 weaklyHypometh 1.00000 4.2881e-01 insignificant 0.9223982 1.1406e-01 insignificant 1.00000 1.0000e+00 insignificant -0.01338550 0.5372921 insignificant 1.00000 insignificant 0.910270 0.7522124 1.6542e-01 7 0.7905156 0.5942118 0.19630381 2.9015e-20 1.0000e+00 weaklyHypermeth 3.7682e-19 1.0000e+00 weaklyHypermeth 2.5168e-04 9.9996e-01 weaklyHypermeth 1.9212e-03 1.0000e+00 weaklyHypermeth 0.20442912 9.0709e-05 hypermethylated 1.3955e-03 hypermethylated 0.911996 0.8140785 0.09051279 7 0.9034464 0.8044286 0.0990178 6.4776e-10 1.0000e+00 weaklyHypermeth 2.8164e-08 1.0000e+00 weaklyHypermeth 2.7200e-07 1.0000e+00 weaklyHypermeth 1.7000e-05 1.0000e+00 weaklyHypermeth 0.08496385 3.1704e-02 weaklyHypermeth 4.1540e-01 insignificant 0.9206212 0.7522124 0.1746609 7 0.8504803 0.5942118 0.2562685 1.6403e-14 1.0000e+00 weaklyHypermeth 2.0250e-13 1.0000e+00 weaklyHypermeth 2.4195e-04 9.9998e-01 weaklyHypermeth 2.0680e-03 1.0000e+00 weaklyHypermeth 0.21781463 4.1119e-05 hypermethylated 7.2138e-04 hypermethylated 0.9221453 0.8140785 0.10520749 7 0.9243584 0.8044286 0.11992981 3.0129e-10 1.0000e+00 weaklyHypermeth 1.7723e-08 1.0000e+00 weaklyHypermeth 1.3278e-06 1.0000e+00 weaklyHypermeth 1.0214e-04 1.0000000 weaklyHypermeth 9.8349e-02 1.7889e-02 weaklyHypermeth 0.38888104 insignificant 0.7527675 0.8140785 -0.0574103 7 0.6790992 0.8044286 -0.1253294 9.0293e-01 4.9850e-04 weaklyHypometh 1.0000e+00 3.3456e-03 weaklyHypometh 8.6954e-01 1.5785e-01 insignificant 1.0000e+00 6.5498e-01 insignificant -0.1194653 1.1402e-02 weaklyHypometh 8.5093e-02 weaklyHypometh chr16 88226150 88227150 49620 DPEP1 ENSG00000015413 0.644793 279 9 0.552166 341 11 0.413792 195 11 0.628463 311 8 0.5750305 123 9 0.676508 521 11 0.484584 133 10 0.455059 241 11 0.4271128 205 8 0.606329 205 9 0.592321 318 11 0.430769 86 8 0.4947701 242 9 0.4524434 115 9 0.6205551 224 11 0.5023923 120 8 0.505844 31 3 0.531667 362 9 0.686573 169 8 0.6582387 341 11 0.697672 138 11 0.593144 144 8 0.549952 206 11 0.633170 127 11 0.913001 158 5 0.6703147 403 11 0.6782131 246 11 0.638587 94 7 0.623135 301 11 0.5873117 434 11 0.495489 405 11 0.527817 478 11 0.5450622 308 11 0.5518162 195 7 0.3143939 161 9 0.459535 44 3 0.442863 212 11 0.5525082 253 11 0.437434 235 9 0.7631864 235 8 0.6242244 359 11 0.5370483 231 7 0.438602 235 7 0.7655970 0.702556 0.6136766 0.814651 0.6503920 0.834759 0.785219 0.6945959 0.6331293 0.7227112 0.7673719 0.479913 0.6991257 0.703232 0.7444504 0.6574163 0.689927 0.719744 0.8355033 0.7132062 0.900914 0.572440 0.751082 0.7436347 0.9308605 0.7900258 0.815088 0.845323 0.780891 0.7508663 0.6931785 0.7714172 0.5805629 0.66502525 0.42337531 0.37256589 0.602920 0.4886804 0.6809387 0.809148 0.6577617 0.5849798 0.5952867 4 0.679237 0.7219917 -0.02774014 11 0.5641615 0.5558666 0.00829496 0.9931497 1.1363e-01 insignificant 1.00000 8.8429e-01 insignificant 0.9994719 3.9883e-03 weaklyHypometh 1.00000 2.6589e-01 insignificant -0.08701327 0.0283357 weaklyHypometh 1.00000 insignificant 0.679332 0.5303160 1.7098e-01 11 0.5346212 0.5088409 0.02578026 3.8340e-07 7.8432e-01 weaklyHypermeth 2.4736e-06 1.0000e+00 weaklyHypermeth 1.3291e-02 7.4533e-01 weaklyHypermeth 7.2629e-02 1.0000e+00 weaklyHypermeth 0.06927399 1.4695e-01 insignificant 6.2531e-01 insignificant 0.679482 0.7017002 0.06624526 10 0.5728084 0.5676143 0.0051940 1.0328e-02 8.7247e-01 weaklyHypermeth 1.0539e-01 1.0000e+00 insignificant 1.2067e-01 9.4628e-01 insignificant 9.2113e-01 1.0000e+00 insignificant -0.01312842 8.4730e-01 insignificant 1.0000e+00 insignificant 0.7223642 0.5303160 0.2021256 11 0.5966488 0.5088409 0.0878079 2.2435e-06 9.7156e-01 hypermethylated 1.4858e-05 1.0000e+00 hypermethylated 3.4042e-04 9.9186e-01 hypermethylated 2.7899e-03 1.0000e+00 hypermethylated 0.15628727 8.3956e-03 weaklyHypermeth 6.3603e-02 weaklyHypermeth 0.7228800 0.7017002 0.09683086 10 0.6106951 0.5676143 0.04308076 5.8031e-03 9.6632e-01 weaklyHypermeth 5.6893e-02 1.0000e+00 weaklyHypermeth 1.1585e-02 9.9959e-01 weaklyHypermeth 1.4664e-01 1.0000000 insignificant 7.3885e-02 3.2375e-01 insignificant 1.00000000 insignificant 0.5307692 0.7017002 -0.1339599 10 0.5451867 0.5676143 -0.0224277 9.6178e-01 5.3886e-02 insignificant 1.0000e+00 2.1994e-01 insignificant 9.6685e-01 1.6539e-01 insignificant 1.0000e+00 6.7506e-01 insignificant -0.0824024 2.9339e-01 insignificant 9.7472e-01 insignificant chr16 88235050 88236050 49621 DPEP1 ENSG00000015413 0.323731 388 11 0.311846 342 11 0.362664 221 11 0.503298 493 13 0.3184476 149 11 0.383170 777 13 0.333169 284 11 0.411950 277 13 0.3082925 384 13 0.367093 269 11 0.333439 371 13 0.347064 127 10 0.1968558 362 11 0.6276144 57 4 0.2452869 352 13 0.2949718 150 9 0.441658 218 10 0.407228 600 13 0.307080 320 13 0.2828783 638 13 0.399848 105 5 0.322916 335 13 0.449894 378 13 0.263050 175 12 0.326261 272 13 0.3004350 691 13 0.2545881 204 13 0.240023 153 10 0.309996 314 13 0.5894997 593 11 0.247965 665 12 0.370941 701 12 0.3138810 415 13 0.1010952 185 13 0.2512626 212 6 0.276224 131 9 0.430595 127 10 0.1833900 586 12 0.336498 525 11 0.3174457 490 11 0.2800019 519 13 0.2729458 676 12 0.409271 547 13 0.2689609 0.290789 0.3329507 0.557917 0.2675789 0.386214 0.253245 0.4515062 0.3136402 0.3610708 0.3283517 0.412192 0.1702963 0.322725 0.2644743 0.3338158 0.440441 0.422064 0.2834172 0.2587189 0.463031 0.301453 0.504534 0.2454602 0.3295328 0.2620442 0.246028 0.213896 0.295171 0.6485129 0.2335557 0.3886488 0.2631824 0.06925161 0.22214297 0.20246849 0.371937 0.1658384 0.2300554 0.224306 0.2358953 0.2507206 0.4254218 8 0.327970 0.3052769 -0.00398290 13 0.3422927 0.3526395 -0.01034675 0.4942523 5.1749e-01 insignificant 1.00000 1.0000e+00 insignificant 0.1713877 9.3085e-01 insignificant 1.00000 1.0000e+00 insignificant 0.01576891 0.6658521 insignificant 1.00000 insignificant 0.327777 0.2276570 8.9794e-02 13 0.3178432 0.2336526 0.08419066 1.0010e-06 9.9988e-01 weaklyHypermeth 6.4167e-06 1.0000e+00 weaklyHypermeth 4.5345e-04 9.9469e-01 weaklyHypermeth 3.2159e-03 1.0000e+00 weaklyHypermeth 0.09597893 9.8103e-02 insignificant 4.5001e-01 insignificant 0.327970 0.2578890 0.04549216 13 0.3422927 0.3149298 0.0273629 1.4442e-02 8.0638e-01 weaklyHypermeth 1.4021e-01 1.0000e+00 insignificant 1.5813e-02 7.8430e-01 weaklyHypermeth 1.9052e-01 1.0000e+00 insignificant 0.03215430 3.4022e-01 insignificant 1.0000e+00 insignificant 0.3052769 0.2277946 0.0879841 13 0.3526395 0.2516259 0.1010136 2.0660e-04 9.9054e-01 weaklyHypermeth 1.1607e-03 1.0000e+00 weaklyHypermeth 4.1122e-03 9.1450e-01 weaklyHypermeth 2.4772e-02 1.0000e+00 weaklyHypermeth 0.08021002 1.7478e-01 insignificant 6.5954e-01 insignificant 0.3052769 0.2578890 0.03865895 13 0.3526395 0.3149298 0.03770964 1.6356e-01 6.9263e-01 insignificant 9.2476e-01 1.0000e+00 insignificant 1.1919e-01 2.3637e-01 insignificant 8.7637e-01 1.0000000 insignificant 1.6385e-02 6.7482e-01 insignificant 1.00000000 insignificant 0.2277946 0.2578890 -0.0501239 13 0.2516259 0.3149298 -0.0633040 9.9798e-01 2.3846e-02 weaklyHypometh 1.0000e+00 1.0790e-01 insignificant 9.9229e-01 4.2290e-02 weaklyHypometh 1.0000e+00 2.2860e-01 insignificant -0.0638246 2.5782e-01 insignificant 8.8903e-01 insignificant chr16 88312350 88313350 49622 C16orf7 ENSG00000075399 0.749978 217 11 0.719556 285 11 0.579910 131 8 0.755688 213 11 0.7011682 117 9 0.819413 257 10 0.469181 92 8 0.685329 164 11 0.7890512 100 8 0.797348 83 8 0.761226 442 11 0.686147 33 1 0.7713126 185 11 0.8487134 111 8 0.7493113 91 11 0.7925926 25 1 0.754986 49 1 0.768690 251 11 0.853354 211 7 0.7751735 223 10 0.820542 105 6 0.824242 82 5 0.818150 146 11 0.691343 113 10 0.873560 79 6 0.6590191 334 10 0.7873731 100 5 0.911058 45 4 0.724142 225 11 0.8538250 272 10 0.776139 308 10 0.826584 255 11 0.6936096 275 11 0.7347326 127 10 0.7607553 175 10 0.777778 22 1 0.747820 180 10 0.7176761 313 10 0.748404 142 10 0.8071739 219 11 0.7291507 197 10 0.8484848 76 8 0.816384 174 11 0.8158830 0.773562 0.5889042 0.811503 0.7800989 0.878127 0.643816 0.7753023 0.8288655 0.8385110 0.8296432 0.814706 0.8068052 0.877465 0.8428603 0.8633571 0.800638 0.804698 0.8680443 0.8352008 0.884694 0.840528 0.851926 0.8337815 0.8932985 0.7581370 0.844756 0.912446 0.800987 0.8772704 0.7929848 0.8728563 0.8185015 0.73894555 0.83152021 0.89196377 0.811426 0.6982726 0.8222586 0.847646 0.8489209 0.8468543 0.8538485 1 0.795122 0.8449612 -0.02822339 11 0.6837209 0.7329697 -0.04924884 0.9990833 1.4453e-01 insignificant 1.00000 9.9691e-01 insignificant 0.9996629 3.0440e-02 weaklyHypometh 1.00000 6.4766e-01 insignificant -0.05575837 0.0675051 insignificant 1.00000 insignificant 0.795302 0.7884615 1.7441e-02 11 0.7143410 0.6787439 0.03559712 2.1148e-02 2.2669e-01 weaklyHypermeth 8.4256e-02 1.0000e+00 weaklyHypermeth 5.6956e-01 1.5129e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00267780 9.0995e-01 insignificant 1.0000e+00 insignificant 0.795059 0.7995050 -0.03017285 11 0.6593917 0.7414422 -0.0820505 9.7350e-01 8.2368e-02 insignificant 1.0000e+00 7.8445e-01 insignificant 8.9954e-01 4.3664e-02 weaklyHypometh 1.0000e+00 6.6226e-01 insignificant -0.04851315 1.3066e-01 insignificant 8.5961e-01 insignificant 0.8452208 0.7884615 0.0420522 11 0.7717980 0.6787439 0.0930541 7.8397e-03 4.8953e-01 weaklyHypermeth 3.3503e-02 1.0000e+00 weaklyHypermeth 8.0275e-02 4.8610e-01 insignificant 3.4306e-01 1.0000e+00 insignificant 0.05843617 3.1579e-02 weaklyHypermeth 1.8254e-01 insignificant 0.8453708 0.7995050 -0.00985564 11 0.7893520 0.7414422 0.04790977 8.7758e-01 1.5207e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.4299e-01 3.5314e-01 insignificant 1.0000e+00 1.0000000 insignificant 7.2452e-03 8.1857e-01 insignificant 1.00000000 insignificant 0.7884615 0.7992565 -0.0618620 11 0.6787439 0.7198957 -0.0411519 9.8101e-01 6.9658e-02 insignificant 1.0000e+00 2.7752e-01 insignificant 9.7024e-01 5.5154e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0511910 8.7653e-02 insignificant 3.9662e-01 insignificant chr16 88380750 88381750 49623 ZNF276 ENSG00000158805 0.905379 591 13 0.890300 309 13 0.858499 266 13 0.895745 509 13 0.8798358 179 8 0.871468 567 13 0.737412 247 8 0.910515 238 13 0.8454418 294 13 0.918438 278 13 0.866958 541 13 0.865153 173 8 0.9112396 430 13 0.8566017 110 10 0.8807026 368 13 0.8629856 104 6 0.602994 62 5 0.845275 703 13 0.913382 267 13 0.9186944 519 13 0.859723 146 10 0.893448 244 13 0.896471 262 13 0.894160 217 13 0.912610 277 13 0.9225282 325 13 0.7423553 209 11 0.813934 103 8 0.899759 329 13 0.8873240 373 13 0.930884 257 13 0.941833 686 13 0.8942104 251 13 0.8719932 357 13 0.9051498 273 8 0.895629 103 6 0.840740 511 12 0.8915773 392 13 0.934780 1149 13 0.9345573 723 13 0.9183525 719 13 0.9027435 498 13 0.931879 506 13 0.9066109 0.880852 0.8460750 0.909541 0.8795541 0.888193 0.850135 0.9292079 0.8479966 0.9020772 0.8653597 0.852913 0.9205537 0.888665 0.8856671 0.8747068 0.682918 0.910737 0.8920989 0.9295141 0.914857 0.892303 0.915793 0.9132959 0.9225683 0.9260174 0.815590 0.888804 0.869943 0.9032400 0.9221478 0.9355702 0.8670761 0.81061250 0.90053975 0.92736893 0.843087 0.9083949 0.9367511 0.937791 0.9243895 0.9273724 0.9486905 7 0.892080 0.9016919 -0.00369380 13 0.8756797 0.9031128 -0.02743309 0.7185988 2.6448e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9760380 7.1150e-02 insignificant 1.00000 9.2663e-01 insignificant -0.02106812 0.3656736 insignificant 1.00000 insignificant 0.892180 0.8532061 1.0241e-02 13 0.8917576 0.8875818 0.00417575 4.0107e-01 4.6052e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.0710e-01 1.1396e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02136564 2.7098e-01 insignificant 9.6780e-01 insignificant 0.892180 0.9143255 -0.03675185 13 0.8917576 0.9259061 -0.0341485 9.9992e-01 4.0392e-04 weaklyHypometh 1.0000e+00 2.6928e-02 weaklyHypometh 9.9996e-01 1.2348e-04 weaklyHypometh 1.0000e+00 1.5436e-02 weaklyHypometh -0.06261140 1.6196e-03 weaklyHypometh 5.5849e-02 weaklyHypometh 0.9016058 0.8532061 0.0157321 13 0.8956599 0.8875818 0.0080780 2.6191e-01 5.7844e-01 insignificant 8.3147e-01 1.0000e+00 insignificant 4.4028e-01 3.9392e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00029752 9.8750e-01 insignificant 1.0000e+00 insignificant 0.9016058 0.9143255 -0.03069417 13 0.8956599 0.9259061 -0.03024622 9.9990e-01 1.7033e-03 weaklyHypometh 1.0000e+00 8.9724e-02 weaklyHypometh 9.9832e-01 2.7352e-02 weaklyHypometh 1.0000e+00 0.8155981 insignificant -4.1543e-02 3.0404e-02 weaklyHypometh 0.46233244 insignificant 0.8532061 0.9143255 -0.0582500 13 0.8875818 0.9259061 -0.0383243 9.6635e-01 3.4215e-03 weaklyHypometh 1.0000e+00 1.8799e-02 weaklyHypometh 8.5955e-01 4.3172e-02 weaklyHypometh 1.0000e+00 2.3096e-01 insignificant -0.0412458 6.5140e-03 weaklyHypometh 5.4283e-02 weaklyHypometh chr16 88436250 88437250 49624 SPIRE2 ENSG00000204991 0.700819 136 5 0.717717 140 6 0.752702 153 5 0.728061 131 3 0.9372294 66 5 0.939853 186 6 0.761727 117 5 0.942152 98 4 0.6995506 159 5 0.831571 141 5 0.806629 248 8 0.801938 91 5 0.8029959 143 5 0.6972727 50 2 0.9645864 137 5 0.7743222 43 3 0.888286 89 5 0.883598 119 3 0.895197 96 5 0.7465541 202 6 0.801010 67 6 0.877941 92 3 0.775950 125 5 0.707702 62 5 0.962281 50 2 0.8809326 177 7 0.6597565 102 6 0.879121 90 5 0.805291 77 5 0.8971667 202 8 0.915822 191 8 0.808087 270 6 0.6750817 141 6 0.8058473 77 5 0.6200000 74 3 0.889167 46 3 0.664777 115 6 0.7298560 186 8 0.896254 131 5 0.8081106 196 6 0.8031860 163 5 0.9227554 154 5 0.787978 114 5 0.9595404 0.816831 0.8319267 0.908845 0.8474694 0.914080 0.918519 0.9077228 0.8791584 0.8914288 0.9061759 0.814703 0.9526551 0.897052 0.9384888 0.8917046 0.882902 0.901216 0.9611767 0.9267627 0.879973 0.815093 0.900029 0.8125514 0.9310880 0.9324329 0.882540 0.857459 0.945784 0.9087325 0.9451731 0.9297079 0.7623302 0.85188643 0.92304954 0.83885460 0.779914 0.8838915 0.9684815 0.953243 0.9146624 0.9110201 0.9578042 3 0.889587 0.8777409 0.00216938 6 0.7933442 0.8064817 -0.01313744 0.6368351 5.6356e-01 insignificant 1.00000 1.0000e+00 insignificant 0.7112909 6.0198e-01 insignificant 1.00000 1.0000e+00 insignificant -0.01728367 0.6003026 lowCoverage 1.00000 lowCoverage 0.889587 0.7887324 7.8609e-02 6 0.7933442 0.7056935 0.08765074 6.6237e-05 9.8755e-01 weaklyHypermeth 3.4679e-04 1.0000e+00 weaklyHypermeth 2.8442e-02 9.9177e-01 weaklyHypermeth 1.3874e-01 1.0000e+00 insignificant 0.08284989 1.0960e-01 lowCoverage 4.8927e-01 lowCoverage 0.889587 0.9182058 -0.02021224 6 0.7933442 0.7661146 0.0272296 6.5640e-01 2.0172e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.6750e-01 3.5241e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03001882 4.0159e-01 lowCoverage 1.0000e+00 lowCoverage 0.8777409 0.7887324 0.0736351 6 0.8064817 0.7056935 0.1007882 6.4076e-04 9.8647e-01 weaklyHypermeth 3.3029e-03 1.0000e+00 weaklyHypermeth 4.0288e-02 9.9365e-01 weaklyHypermeth 1.8826e-01 1.0000e+00 insignificant 0.10013356 6.7885e-02 insignificant 3.2637e-01 insignificant 0.8777409 0.9182058 -0.02337936 6 0.8064817 0.7661146 0.04036708 6.2242e-01 2.4111e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.7477e-01 4.8963e-01 insignificant 1.0000e+00 1.0000000 insignificant -1.2735e-02 7.3993e-01 insignificant 1.00000000 insignificant 0.7887324 0.9182058 -0.0983394 6 0.7056935 0.7661146 -0.0604211 9.7634e-01 9.4366e-03 weaklyHypometh 1.0000e+00 4.8643e-02 weaklyHypometh 9.9561e-01 1.7063e-01 insignificant 1.0000e+00 6.9361e-01 insignificant -0.1128687 4.9991e-02 weaklyHypometh 2.6037e-01 insignificant chr16 88811150 88812150 49627 ENSG00000210972 0.674163 220 6 0.591811 88 5 0.545128 32 2 0.735905 76 6 0.8442177 42 3 0.686603 142 5 0.404762 20 1 0.599603 95 5 0.6571429 38 4 0.627589 96 6 0.745503 184 5 0.547619 18 0 0.6945173 202 7 0.7972222 30 4 0.5948075 105 6 0.6800000 14 1 0.300000 7 0 0.728398 223 6 0.690560 116 5 0.8156022 73 5 0.798214 47 4 0.749860 91 6 0.718259 70 5 0.730159 52 4 0.886921 141 7 0.6909598 92 5 0.7358277 97 4 0.661111 16 2 0.733749 88 6 0.8019761 118 5 0.689760 75 5 0.761462 145 7 0.5736216 54 4 0.4594432 179 6 0.3304278 149 5 0.227439 36 2 0.465646 40 3 0.7701028 97 5 0.472957 153 6 0.6934524 150 6 0.6605339 72 6 0.5596172 140 6 0.571786 111 6 0.6599294 0.474778 0.5759349 0.688709 0.7613821 0.725714 0.331301 0.6418022 0.6231707 0.6231127 0.7231253 0.593496 0.7274969 0.735477 0.5605117 0.5758724 0.407638 0.697365 0.7122094 0.7997178 0.744411 0.745277 0.664375 0.7654859 0.9148646 0.7149819 0.778165 0.644228 0.742806 0.7702569 0.7079207 0.7852250 0.5841356 0.45239010 0.41915670 0.11285463 0.520296 0.7958125 0.4152244 0.706047 0.7309682 0.5535097 0.6669980 1 0.678748 0.7655039 -0.08854036 4 0.6934566 0.7550565 -0.06159986 0.9891426 7.1515e-04 lowCoverage 1.00000 5.1082e-02 lowCoverage 0.9998438 1.1699e-04 lowCoverage 1.00000 3.9034e-02 lowCoverage -0.09846384 0.0075871 lowCoverage 0.81716 lowCoverage 0.678748 0.4918919 1.9251e-01 4 0.6934566 0.4518489 0.24160774 8.6232e-14 1.0000e+00 lowCoverage 8.4541e-13 1.0000e+00 lowCoverage 1.5078e-04 9.8473e-01 lowCoverage 1.1967e-03 1.0000e+00 lowCoverage 0.17694425 7.2586e-02 lowCoverage 3.6293e-01 lowCoverage 0.678748 0.6038339 0.05875317 6 0.6934566 0.6112723 0.0821843 1.8520e-02 9.5929e-01 weaklyHypermeth 1.6536e-01 1.0000e+00 insignificant 1.7456e-01 7.6311e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.05638835 2.7859e-01 lowCoverage 1.0000e+00 lowCoverage 0.7655039 0.4918919 0.2736834 4 0.7550565 0.4518489 0.3032076 8.7712e-13 1.0000e+00 lowCoverage 9.8553e-12 1.0000e+00 lowCoverage 7.3287e-06 9.9998e-01 lowCoverage 8.7247e-05 1.0000e+00 lowCoverage 0.27540809 1.5124e-02 lowCoverage 1.0083e-01 lowCoverage 0.7655039 0.6038339 0.14239380 4 0.7550565 0.6112723 0.14378420 5.0553e-04 9.7298e-01 lowCoverage 6.4811e-03 1.0000e+00 lowCoverage 7.8278e-03 9.9799e-01 lowCoverage 1.1412e-01 1.0000000 lowCoverage 1.5485e-01 1.2299e-02 weaklyHypermeth 0.31536005 insignificant 0.4918919 0.6038339 -0.1707169 4 0.4518489 0.6112723 -0.1594234 9.9494e-01 6.9376e-04 lowCoverage 1.0000e+00 4.4189e-03 lowCoverage 9.4962e-01 7.1646e-02 lowCoverage 1.0000e+00 3.5468e-01 lowCoverage -0.1205559 2.0503e-01 lowCoverage 7.4019e-01 lowCoverage chr17 730450 731450 49635 NXN ENSG00000167693 0.871961 376 8 0.805136 410 11 0.846842 396 10 0.642281 432 6 0.7618705 291 11 0.860834 436 9 0.870677 398 10 0.919704 265 9 0.9208723 374 10 0.791433 333 10 0.933928 468 10 0.794611 210 10 0.7873559 372 10 0.8329371 140 6 0.7841167 425 10 0.8763636 159 10 0.871253 216 10 0.916223 460 7 0.957072 484 10 0.8452486 415 10 0.836697 182 13 0.953447 188 6 0.880782 262 9 0.856421 202 10 0.772243 101 6 0.8059094 321 9 0.8676349 199 10 0.769761 190 10 0.947783 268 10 0.8082424 374 11 0.936887 512 11 0.893973 507 11 0.7611563 367 10 0.8716305 185 10 0.8040941 594 10 0.805833 53 5 0.777574 369 12 0.8969461 347 10 0.872351 368 8 0.9357292 381 10 0.8928027 346 8 0.9629902 345 6 0.981435 370 6 0.9167432 0.861526 0.8868593 0.930429 0.8812746 0.937783 0.911192 0.8705370 0.9074430 0.9274805 0.9395310 0.900995 0.9516882 0.942935 0.9146268 0.8526843 0.910841 0.919308 0.9642134 0.9126021 0.852364 0.933313 0.967277 0.9170302 0.9020032 0.9299799 0.876471 0.889168 0.916808 0.9464657 0.9411012 0.8922983 0.9378832 0.94875999 0.93050084 0.87140832 0.962481 0.8444600 0.9660107 0.956697 0.9238747 0.9405943 0.9766350 6 0.912748 0.9137931 -0.00409733 10 0.7904578 0.7929375 -0.00247971 0.8666083 2.8220e-02 weaklyHypometh 1.00000 4.5496e-01 insignificant 0.9060869 3.1566e-01 insignificant 1.00000 1.0000e+00 insignificant -0.01627902 0.5183249 insignificant 1.00000 insignificant 0.912748 0.9289817 -1.9571e-02 10 0.7904578 0.7685472 0.02191056 1.5264e-01 4.6807e-02 weaklyHypometh 5.1568e-01 7.8011e-01 insignificant 5.8807e-01 2.1196e-02 weaklyHypometh 1.0000e+00 5.1697e-01 insignificant 0.02499688 3.7923e-01 insignificant 1.0000e+00 insignificant 0.915670 0.9486188 -0.03375942 8 0.9024480 0.8490839 0.0533641 6.9437e-01 4.2903e-03 weaklyHypometh 1.0000e+00 1.3834e-01 insignificant 9.7782e-01 6.9347e-04 weaklyHypometh 1.0000e+00 5.7790e-02 weaklyHypometh -0.08452555 9.4696e-03 weaklyHypometh 1.9326e-01 insignificant 0.9137931 0.9289817 -0.0073468 10 0.7929375 0.7685472 0.0243903 2.8824e-02 3.8027e-01 inconclusive 1.1216e-01 1.0000e+00 insignificant 5.2659e-01 1.0538e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.04127590 1.7619e-01 insignificant 6.6235e-01 insignificant 0.9175573 0.9486188 -0.03319959 8 0.9137315 0.8490839 0.06464755 4.6115e-01 2.2299e-02 weaklyHypometh 1.0000e+00 5.7177e-01 insignificant 9.8327e-01 1.3725e-02 weaklyHypometh 1.0000e+00 0.6156969 insignificant -6.8247e-02 3.2507e-02 weaklyHypometh 0.47016804 insignificant 0.9331579 0.9486188 -0.0235624 8 0.8580630 0.8490839 0.0089791 6.3002e-01 1.6395e-01 insignificant 1.0000e+00 5.9952e-01 insignificant 8.3308e-01 2.3138e-01 insignificant 1.0000e+00 8.9795e-01 insignificant -0.1095224 5.3389e-03 weaklyHypometh 4.8535e-02 weaklyHypometh chr17 731850 732850 49636 NXN ENSG00000167693 0.821276 366 11 0.753583 243 11 0.632625 246 11 0.756933 318 11 0.8831975 134 11 0.746952 593 11 0.798471 171 11 0.809007 214 11 0.7511971 197 11 0.778980 179 11 0.843860 454 11 0.796311 88 9 0.8722482 236 11 0.7341270 59 3 0.8170131 153 9 0.6000000 85 8 0.787568 87 9 0.832317 367 11 0.781275 324 11 0.7849190 522 11 0.873419 105 5 0.876195 146 10 0.752759 291 11 0.821253 144 10 0.855437 106 8 0.7716476 348 11 0.8824916 115 7 0.827350 107 8 0.835897 208 11 0.8576943 327 11 0.891590 446 11 0.840715 635 11 0.7863704 287 11 0.7344877 215 11 0.7465291 467 10 0.702333 92 8 0.738193 152 11 0.7898687 343 11 0.736868 382 11 0.8424298 373 11 0.7770985 327 11 0.7818324 306 11 0.872763 370 11 0.8619462 0.766805 0.6792314 0.883518 0.8857691 0.847673 0.806666 0.8399866 0.7524231 0.8781974 0.8603111 0.837831 0.9044200 0.900472 0.8289578 0.6357755 0.718265 0.832298 0.7989067 0.8726216 0.851484 0.861030 0.844429 0.8569198 0.8833236 0.8556834 0.881215 0.851486 0.839755 0.8693346 0.8977684 0.9063472 0.7610044 0.70035033 0.75134432 0.77309353 0.733434 0.7894406 0.8467552 0.870838 0.8177785 0.8801698 0.8977970 7 0.805004 0.8495635 -0.05053940 11 0.7828591 0.7971909 -0.01433178 0.9993237 1.4931e-04 weaklyHypometh 1.00000 2.1330e-02 weaklyHypometh 0.9975974 1.7483e-03 weaklyHypometh 1.00000 1.6492e-01 insignificant -0.06144427 0.0040783 weaklyHypometh 0.81566 insignificant 0.805213 0.7577121 4.2625e-02 11 0.7887776 0.7284612 0.06031641 1.8179e-03 5.9681e-02 weaklyHypermeth 8.3775e-03 9.6260e-01 weaklyHypermeth 1.9849e-01 5.5752e-02 insignificant 7.6344e-01 1.0000e+00 insignificant 0.02946275 1.6881e-01 insignificant 6.7794e-01 insignificant 0.804926 0.8043231 -0.02380813 11 0.7494528 0.7061098 0.0433431 7.0366e-01 8.9994e-03 weaklyHypometh 1.0000e+00 2.0990e-01 insignificant 7.6746e-01 2.9751e-02 weaklyHypometh 1.0000e+00 5.6133e-01 insignificant -0.02310529 4.4761e-01 insignificant 1.0000e+00 insignificant 0.8493935 0.7577121 0.1013851 11 0.7898474 0.7284612 0.0613862 1.9783e-06 3.3656e-01 weaklyHypermeth 1.3277e-05 1.0000e+00 weaklyHypermeth 9.4144e-04 4.4035e-01 weaklyHypermeth 6.6439e-03 1.0000e+00 weaklyHypermeth 0.09090703 2.9033e-04 weaklyHypermeth 3.8711e-03 weaklyHypermeth 0.8499832 0.8043231 0.02880176 11 0.8300921 0.7061098 0.12398231 5.2166e-03 3.9700e-01 weaklyHypermeth 5.1763e-02 1.0000e+00 weaklyHypermeth 5.7379e-02 4.4038e-01 insignificant 4.8218e-01 1.0000000 insignificant 3.8339e-02 2.0942e-01 insignificant 1.00000000 insignificant 0.7578880 0.8047809 -0.0660253 11 0.7665381 0.7649522 0.0015859 1.2833e-01 1.9024e-03 weaklyHypometh 1.0000e+00 1.1125e-02 weaklyHypometh 2.5098e-01 1.5224e-02 weaklyHypometh 1.0000e+00 9.6970e-02 weaklyHypometh -0.0525680 1.0610e-01 insignificant 4.6130e-01 insignificant chr17 753850 754850 49638 NXN ENSG00000167693 0.874172 149 6 0.753356 220 6 0.802659 165 6 0.845558 214 5 0.8284244 80 6 0.824150 200 6 0.743844 164 6 0.811951 158 6 0.6844652 133 6 0.812534 105 5 0.798647 339 6 0.894617 76 5 0.7550083 152 6 0.7607143 63 4 0.8182685 182 6 0.4805556 30 3 0.730421 95 3 0.790922 111 5 0.837549 136 6 0.7569697 182 6 0.618519 35 4 0.659048 33 3 0.726603 82 5 0.823737 62 5 0.840706 77 4 0.7788981 209 6 0.7304792 72 5 0.684762 70 4 0.841563 134 6 0.7706439 154 6 0.852959 216 6 0.806831 231 6 0.7755152 176 5 0.6864620 223 5 0.5632634 165 5 0.589869 45 2 0.759059 129 6 0.5520133 214 6 0.821813 127 6 0.8590341 234 6 0.7157287 207 6 0.7075188 70 4 0.817463 201 6 0.8672028 0.844477 0.8169266 0.837708 0.8311287 0.850752 0.828869 0.8100337 0.7700843 0.8526510 0.8141104 0.839680 0.8942384 0.810640 0.8396854 0.5862069 0.826944 0.814533 0.8531166 0.8114280 0.760291 0.747396 0.715402 0.8419018 0.8671032 0.8072739 0.773686 0.810759 0.844195 0.8090737 0.8901328 0.8406899 0.7454304 0.66749312 0.63865058 0.69770115 0.762238 0.6227668 0.8414425 0.873224 0.7536050 0.7257013 0.7999933 3 0.826161 0.8232727 0.00879252 6 0.7832691 0.6482505 0.13501863 0.4378961 8.5037e-01 insignificant 1.00000 1.0000e+00 insignificant 0.5968268 8.2043e-01 insignificant 1.00000 1.0000e+00 insignificant 0.01901031 0.5273039 insignificant 1.00000 insignificant 0.826930 0.7373950 1.2000e-01 6 0.8403937 0.7031061 0.13728753 3.7954e-09 1.0000e+00 weaklyHypermeth 2.8543e-08 1.0000e+00 weaklyHypermeth 4.1710e-04 1.0000e+00 weaklyHypermeth 3.0007e-03 1.0000e+00 weaklyHypermeth 0.12587559 2.5181e-02 lowCoverage 1.5544e-01 lowCoverage 0.826590 0.8379023 0.00044900 6 0.6975365 0.8251229 -0.1275864 4.3339e-01 7.3947e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.8722e-01 8.6724e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00407229 9.1337e-01 insignificant 1.0000e+00 insignificant 0.8244720 0.7373950 0.1223006 6 0.8334650 0.7031061 0.1303588 5.5022e-06 1.0000e+00 weaklyHypermeth 3.3964e-05 1.0000e+00 weaklyHypermeth 1.9701e-03 1.0000e+00 weaklyHypermeth 1.3134e-02 1.0000e+00 weaklyHypermeth 0.10686529 4.9747e-02 lowCoverage 2.5767e-01 lowCoverage 0.8243440 0.8377088 0.00216050 6 0.8057091 0.7959768 0.00973235 5.4724e-01 7.4189e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.6777e-01 9.6860e-01 insignificant 1.0000e+00 1.0000000 insignificant -2.3083e-02 5.5843e-01 insignificant 1.00000000 insignificant 0.7368421 0.8377088 -0.1051021 6 0.6536238 0.7959768 -0.1423529 1.0000e+00 1.6417e-04 weaklyHypometh 1.0000e+00 1.2252e-03 weaklyHypometh 9.9997e-01 9.6158e-03 weaklyHypometh 1.0000e+00 6.4980e-02 weaklyHypometh -0.1299479 3.1632e-02 lowCoverage 1.8607e-01 lowCoverage chr17 771150 772150 49639 NXN ENSG00000167693 0.791354 145 8 0.786876 262 6 0.694547 244 8 0.722024 81 8 0.9820370 97 5 0.688072 123 8 0.734055 167 6 0.875107 212 11 0.7492349 199 5 0.862149 184 5 0.844873 357 12 0.706428 103 5 0.9119124 290 10 1.0000000 14 0 0.5827677 165 5 0.7857143 33 3 0.837075 70 5 0.746528 77 6 0.786944 395 12 0.7284124 141 8 0.850658 148 9 0.888528 35 2 0.540086 171 5 0.791896 79 8 0.751113 105 6 0.8361755 371 12 0.8341937 172 10 0.875000 59 5 0.708538 299 8 0.8245464 344 12 0.888624 511 12 0.742345 160 9 0.9362083 188 5 0.9787440 251 12 0.7341486 169 4 0.828125 32 3 0.851026 91 6 0.9148397 409 11 0.825299 125 5 0.8984623 88 7 0.7361111 64 3 0.8084416 44 4 0.789931 35 3 0.8419186 0.797333 0.6896885 0.760571 0.9529333 0.882015 0.790583 0.9240460 0.8245451 0.8615911 0.8623605 0.843621 0.9009662 0.911670 0.8024510 0.7783869 0.782324 0.871733 0.9054884 0.8992839 0.932868 0.890667 0.868077 0.6943639 0.7865455 0.8753354 0.853658 0.888333 0.923365 0.9076844 0.9141204 0.8088804 0.9121510 0.96033623 0.95106607 0.82500000 0.839880 0.8935202 0.9224680 0.903381 0.9426667 0.8621818 0.7771111 3 0.833581 0.8708231 -0.04561332 8 0.6963081 0.6393475 0.05696058 0.9696919 7.4770e-02 insignificant 1.00000 7.7486e-01 insignificant 0.8259357 7.2383e-01 insignificant 1.00000 1.0000e+00 insignificant -0.00350314 0.9246016 insignificant 1.00000 insignificant 0.835175 0.9026316 -7.7434e-02 8 0.8172996 0.9041291 -0.08682947 9.8454e-01 1.6602e-04 weaklyHypometh 1.0000e+00 5.1882e-03 weaklyHypometh 9.7116e-01 9.0777e-04 weaklyHypometh 1.0000e+00 2.8368e-02 weaklyHypometh -0.08304307 8.1262e-02 insignificant 3.9234e-01 insignificant 0.835175 0.8792135 -0.04239958 3 0.8172996 0.8064079 0.0108918 6.1423e-01 4.4970e-02 lowCoverage 1.0000e+00 5.4841e-01 lowCoverage 8.7681e-01 6.6094e-02 lowCoverage 1.0000e+00 8.4546e-01 lowCoverage -0.02084327 5.6231e-01 lowCoverage 1.0000e+00 lowCoverage 0.8736713 0.9026316 -0.0292846 8 0.8524633 0.9041291 -0.0516658 9.4644e-01 9.1203e-05 weaklyHypometh 1.0000e+00 4.4715e-03 weaklyHypometh 9.9736e-01 1.8048e-03 weaklyHypometh 1.0000e+00 8.5941e-02 weaklyHypometh -0.07953993 1.1054e-01 insignificant 4.7440e-01 insignificant 0.8736713 0.8792135 0.00432428 3 0.8524633 0.8064079 0.04605543 2.4820e-01 1.4599e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.9597e-01 1.7738e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage -1.7340e-02 6.6359e-01 lowCoverage 1.00000000 lowCoverage 0.9026316 0.8792135 0.0367855 3 0.9041291 0.8064079 0.0977212 1.2347e-01 9.9294e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 4.2555e-01 9.6003e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0621998 1.9739e-01 lowCoverage 7.2071e-01 lowCoverage chr17 800650 801650 49642 NXN ENSG00000167693 0.518804 101 7 0.417677 138 8 0.547222 57 3 0.516429 84 7 0.7620370 60 5 0.775597 98 5 0.533011 113 7 0.440765 78 8 0.3765253 102 8 0.622139 67 5 0.411401 150 8 0.567795 78 5 0.3958333 88 5 0.7375000 23 2 0.6673235 90 8 0.5890152 49 3 0.396552 61 3 0.780702 78 2 0.591667 30 3 0.6656746 63 5 0.583333 17 0 0.500000 6 0 0.472727 50 6 0.565000 32 3 0.644762 35 2 0.6295322 111 8 0.3333333 12 0 0.291667 15 0 0.502751 107 8 0.6218463 105 7 0.548826 89 7 0.644444 99 7 0.6517372 107 8 0.3772817 102 8 0.4585589 137 8 0.375000 11 0 0.591177 75 5 0.5905768 100 8 0.775595 69 6 0.7241019 73 5 0.5834127 80 5 0.8253968 24 2 0.647715 86 5 0.6951659 0.700072 0.6490741 0.693833 0.8048148 0.783313 0.476235 0.6558730 0.5863244 0.7240777 0.7322532 0.748848 0.5222222 0.725692 0.7568856 0.7570707 0.613128 0.772222 0.6609697 0.7185185 0.579129 0.679129 0.693333 0.8800000 0.7641994 0.7369786 0.383333 0.670796 0.734476 0.7348218 0.6955474 0.7833333 0.6580586 0.52179894 0.62458491 0.73361444 0.785787 0.6357700 0.7817460 0.756871 0.7190926 0.8302618 0.7169105 0 0.501870 0.6194690 -0.04075812 6 0.5816843 0.5299915 0.05169282 0.4428198 5.3871e-03 weaklyHypometh 1.00000 1.7957e-01 insignificant 0.1361186 3.7336e-01 insignificant 1.00000 1.0000e+00 insignificant 0.03749820 0.4135491 lowCoverage 1.00000 lowCoverage 0.500937 0.5319549 -1.9981e-02 8 0.5436556 0.4934492 0.05020640 3.0877e-02 3.8855e-01 inconclusive 1.1830e-01 1.0000e+00 insignificant 3.5792e-01 8.6751e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.05829489 3.3568e-01 insignificant 1.0000e+00 insignificant 0.500937 0.7108434 -0.07425545 5 0.5436556 0.7931373 -0.2494817 9.9989e-01 2.0545e-07 weaklyHypometh 1.0000e+00 5.1364e-05 weaklyHypometh 9.9943e-01 2.8427e-02 weaklyHypometh 1.0000e+00 5.4668e-01 insignificant -0.14556079 2.3852e-02 lowCoverage 3.4568e-01 lowCoverage 0.6203840 0.5319549 0.0649826 6 0.5781726 0.4934492 0.0847233 7.6523e-03 9.1074e-01 weaklyHypermeth 3.2843e-02 1.0000e+00 weaklyHypermeth 4.0676e-01 9.3398e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02079669 7.3328e-01 lowCoverage 1.0000e+00 lowCoverage 0.6203840 0.7108434 -0.04979768 5 0.5781726 0.7931373 -0.21496475 9.8814e-01 5.4674e-03 weaklyHypometh 1.0000e+00 2.0514e-01 insignificant 9.8952e-01 6.5312e-02 insignificant 1.0000e+00 1.0000000 insignificant -1.8306e-01 8.6890e-03 lowCoverage 0.26919047 lowCoverage 0.5319549 0.7108434 -0.1292702 5 0.4934492 0.7931373 -0.2996881 9.9988e-01 5.3639e-04 weaklyHypometh 1.0000e+00 3.5289e-03 weaklyHypometh 9.9993e-01 3.6680e-02 weaklyHypometh 1.0000e+00 2.0378e-01 insignificant -0.2038557 1.2347e-02 lowCoverage 9.0123e-02 lowCoverage chr17 902250 903250 49644 TIMM22 ENSG00000177370 0.881281 132 11 0.895568 971 22 0.811832 882 22 0.945501 200 18 0.9325459 523 19 0.917643 475 22 0.889920 931 22 0.948502 547 17 0.8177366 485 18 0.953896 500 16 0.872884 510 16 0.855251 520 20 0.9270313 615 16 0.9000000 20 2 0.9294945 711 21 0.7684620 347 20 0.778390 171 14 0.923218 176 12 0.949922 1615 20 0.9371651 200 16 0.862698 130 12 0.892113 63 5 0.935539 311 14 0.939512 224 20 0.911111 69 5 0.9415624 1026 22 0.8801265 238 18 0.922122 212 18 0.888228 883 20 0.9524715 1803 22 0.954190 872 17 0.955966 279 13 0.8793445 572 17 0.7196779 794 22 0.8709374 579 21 0.940829 70 7 0.923743 464 22 0.9393232 554 17 0.901674 141 12 0.9753501 249 20 0.9065399 98 10 0.9804779 129 12 0.950183 186 12 0.9073366 0.891932 0.8654246 0.952807 0.9416632 0.921264 0.894905 0.9288671 0.8905202 0.9320343 0.9008515 0.870332 0.9129844 NA 0.9404560 0.8044851 0.757611 0.935791 0.9436968 0.9366024 0.948076 0.921050 0.918665 0.9388886 0.8860317 0.9452537 0.943703 0.972982 0.949883 0.9571338 0.9521937 0.9300053 0.8739965 0.78310146 0.91411609 0.93923848 0.937118 0.9342726 0.9376395 0.989692 0.9284349 0.9716346 0.9349340 10 0.904852 0.9451718 -0.03991409 22 0.8967488 0.9410986 -0.04434977 1.0000000 6.8497e-11 weaklyHypometh 1.00000 6.8497e-08 weaklyHypometh 1.0000000 1.5202e-08 weaklyHypometh 1.00000 1.5202e-05 weaklyHypometh -0.02782460 0.0900696 insignificant 1.00000 insignificant 0.904852 0.8578965 4.4690e-02 22 0.8967488 0.8451158 0.05163297 9.7596e-06 9.9753e-01 weaklyHypermeth 5.7409e-05 1.0000e+00 weaklyHypermeth 4.0061e-01 6.5291e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01283630 7.3600e-01 insignificant 1.0000e+00 insignificant 0.904852 0.9539228 -0.04840464 12 0.8967488 0.9525761 -0.0558273 1.0000e+00 5.8350e-08 weaklyHypometh 1.0000e+00 2.9175e-05 weaklyHypometh 1.0000e+00 1.4501e-07 weaklyHypometh 1.0000e+00 7.2507e-05 weaklyHypometh -0.05103277 3.6972e-02 weaklyHypometh 4.4014e-01 insignificant 0.9451718 0.8578965 0.0840791 22 0.9410986 0.8451158 0.0959827 3.2075e-15 1.0000e+00 weaklyHypermeth 4.1122e-14 1.0000e+00 weaklyHypermeth 3.4668e-04 1.0000e+00 weaklyHypermeth 2.7958e-03 1.0000e+00 weaklyHypermeth 0.04066090 2.9563e-01 insignificant 9.9204e-01 insignificant 0.9451718 0.9539228 -0.00696185 12 0.9410986 0.9525761 -0.01147749 7.3590e-01 1.5973e-02 weaklyHypometh 1.0000e+00 4.5703e-01 insignificant 9.8996e-01 1.4939e-02 weaklyHypometh 1.0000e+00 0.6156969 insignificant -2.3208e-02 2.6468e-01 insignificant 1.00000000 insignificant 0.8578965 0.9539228 -0.0823285 12 0.8451158 0.9525761 -0.1074602 1.0000e+00 6.0913e-08 weaklyHypometh 1.0000e+00 7.3389e-07 weaklyHypometh 1.0000e+00 2.3985e-04 weaklyHypometh 1.0000e+00 2.8897e-03 weaklyHypometh -0.0638691 1.3538e-01 insignificant 5.5257e-01 insignificant chr17 930750 931750 49645 TIMM22 ENSG00000177370 0.839709 156 7 0.692898 183 7 0.610513 84 7 0.895908 111 5 0.7370116 64 7 0.890035 299 7 0.805442 81 5 0.793701 125 7 0.7683908 76 3 0.817763 69 5 0.827116 241 7 0.585859 34 3 0.8428299 93 5 0.9083333 44 5 0.8421017 89 5 0.8000000 41 3 0.603509 49 3 0.743475 80 5 0.792371 134 7 0.8693656 235 7 0.871992 96 7 0.874603 34 3 0.765437 82 7 0.822619 65 7 0.722222 28 2 0.8166922 198 7 0.7564317 66 4 0.833333 36 2 0.883858 107 6 0.8630228 203 7 0.785430 287 7 0.816785 318 7 0.6817849 160 7 0.5968915 122 7 0.7240273 162 7 0.406602 41 3 0.520379 93 6 0.6722449 224 7 0.832219 136 7 0.8071448 186 7 0.8561876 95 4 0.8251515 122 3 0.818788 114 7 0.8139577 0.802152 0.7033333 0.872332 0.7366814 0.827702 0.766488 0.7412662 0.7267744 0.8123090 0.8319534 0.724514 0.8084654 0.836090 0.8279427 0.8839841 0.689436 0.787306 0.7610089 0.8238245 0.854593 0.852814 0.725973 0.7758333 0.7826389 0.7648795 0.797725 0.867708 0.844989 0.7857871 0.8122160 0.7968254 0.7323738 0.55614873 0.72048654 0.65496948 0.630878 0.7428758 0.8313962 0.806309 0.8126273 0.7790611 0.8169005 3 0.789773 0.8355263 -0.02290518 7 0.7928392 0.8188210 -0.02598175 0.9531490 8.5898e-02 insignificant 1.00000 8.1164e-01 insignificant 0.8609881 1.2967e-02 weaklyHypometh 1.00000 4.1829e-01 insignificant -0.03438553 0.1983996 insignificant 1.00000 insignificant 0.789773 0.6787500 1.1122e-01 7 0.7928392 0.6594844 0.13335480 2.8308e-08 9.6092e-01 weaklyHypermeth 2.0077e-07 1.0000e+00 weaklyHypermeth 4.8211e-05 9.1120e-01 weaklyHypermeth 4.2290e-04 1.0000e+00 weaklyHypermeth 0.18299513 1.0677e-02 weaklyHypermeth 7.7371e-02 weaklyHypermeth 0.789773 0.7641654 -0.01734218 7 0.7928392 0.8140966 -0.0212574 9.2244e-01 2.3149e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.2658e-01 1.0515e-01 insignificant 1.0000e+00 9.8270e-01 insignificant -0.04458148 6.4582e-02 insignificant 5.8833e-01 insignificant 0.8355263 0.6787500 0.1473977 7 0.8188210 0.6594844 0.1593366 1.7204e-08 9.5348e-01 weaklyHypermeth 1.3874e-07 1.0000e+00 weaklyHypermeth 1.1672e-05 9.9981e-01 weaklyHypermeth 1.3115e-04 1.0000e+00 weaklyHypermeth 0.21738066 5.3337e-03 weaklyHypermeth 4.4447e-02 weaklyHypermeth 0.8355263 0.7641654 0.00344235 7 0.8188210 0.8140966 0.00472435 4.8854e-01 3.5118e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.0305e-01 6.4492e-01 insignificant 1.0000e+00 1.0000000 insignificant -1.0196e-02 5.5883e-01 insignificant 1.00000000 insignificant 0.6787500 0.7641654 -0.1360066 7 0.6594844 0.8140966 -0.1546122 9.9999e-01 2.6224e-05 weaklyHypometh 1.0000e+00 2.2037e-04 weaklyHypometh 1.0000e+00 6.1102e-05 weaklyHypometh 1.0000e+00 9.5472e-04 weaklyHypometh -0.2275766 5.0385e-03 weaklyHypometh 4.7487e-02 weaklyHypometh chr17 937450 938450 49646 TIMM22 ENSG00000177370 0.516537 248 10 0.326534 476 12 0.393879 464 14 0.558439 282 13 0.4192761 274 14 0.434133 582 14 0.410969 438 14 0.449675 446 14 0.4159613 425 14 0.472280 361 14 0.519259 481 14 0.425674 274 13 0.3911399 396 14 0.7250489 122 8 0.4367410 359 14 0.4694684 242 11 0.303027 186 11 0.596748 257 10 0.341149 668 13 0.4188927 539 14 0.442700 139 11 0.299107 262 12 0.442137 342 14 0.408934 205 10 0.469298 182 10 0.3790559 565 13 0.4038977 291 14 0.411770 201 13 0.534259 443 12 0.4013673 617 14 0.469843 922 14 0.627387 552 14 0.4890808 556 14 0.2743943 305 11 0.3281879 405 13 0.524092 101 8 0.385862 463 13 0.5862649 567 14 0.301663 327 13 0.4584740 387 13 0.4170117 186 11 0.3880488 259 7 0.439105 342 14 0.5679950 0.445306 0.4633487 0.570514 0.5718654 0.568577 0.550551 0.5456960 0.5076859 0.5776112 0.5941959 0.510425 0.4961461 0.569371 0.5541857 0.5818976 0.393544 0.604455 0.4832581 0.5237094 0.583029 0.371817 0.492362 0.5133435 0.5593199 0.5117990 0.520872 0.534495 0.549742 0.5408259 0.4815681 0.6499667 0.5685462 0.33346270 0.30512452 0.62025996 0.419279 0.5999272 0.4051250 0.478504 0.4965845 0.4390107 0.4374728 8 0.436593 0.4392365 0.00952822 14 0.5302871 0.4550333 0.07525377 0.2950698 9.2787e-01 insignificant 1.00000 1.0000e+00 insignificant 0.1697701 9.8844e-01 insignificant 1.00000 1.0000e+00 insignificant 0.01042863 0.7481477 insignificant 1.00000 insignificant 0.436235 0.4422194 2.2207e-02 14 0.4634412 0.4428983 0.02054286 4.4186e-05 2.0364e-08 weaklyHypermeth 2.3629e-04 1.3576e-06 weaklyHypermeth 3.3552e-02 8.3778e-02 weaklyHypermeth 1.6053e-01 1.0000e+00 insignificant 0.01992782 7.2293e-01 insignificant 1.0000e+00 insignificant 0.436443 0.3764157 0.07367427 11 0.5026569 0.4344964 0.0681605 6.0270e-09 4.0787e-02 weaklyHypermeth 2.0783e-07 5.1629e-01 weaklyHypermeth 6.8113e-05 4.9141e-01 weaklyHypermeth 1.8920e-03 1.0000e+00 weaklyHypermeth 0.05038119 1.8132e-01 insignificant 1.0000e+00 insignificant 0.4391591 0.4425887 0.0141607 14 0.4494124 0.4705795 -0.0211670 1.8015e-02 4.6187e-05 weaklyHypermeth 7.2351e-02 2.5660e-03 weaklyHypermeth 1.3628e-01 4.7720e-02 inconclusive 5.4514e-01 1.0000e+00 insignificant 0.00949919 8.6703e-01 insignificant 1.0000e+00 insignificant 0.4392107 0.3764157 0.07130439 11 0.4523882 0.4344964 0.01789178 2.0639e-02 4.0121e-02 weaklyHypermeth 1.7057e-01 7.7156e-01 insignificant 3.4741e-02 4.3048e-01 weaklyHypermeth 3.3730e-01 1.0000000 insignificant 3.9953e-02 2.9555e-01 insignificant 1.00000000 insignificant 0.4425887 0.3755837 0.0469598 11 0.4705795 0.3991524 0.0714270 1.9149e-03 7.8334e-01 weaklyHypermeth 4.9101e-02 1.0000e+00 weaklyHypermeth 6.6009e-02 7.5166e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0304534 6.0537e-01 insignificant 1.0000e+00 insignificant chr17 1172850 1173850 49650 ENSG00000209456 0.693261 799 23 0.640215 731 23 0.634190 423 23 0.722850 690 23 0.8065158 333 22 0.685437 874 21 0.705679 423 21 0.714325 532 23 0.6001491 400 19 0.820380 365 17 0.726431 768 23 0.665756 191 9 0.7219322 642 25 0.6767506 358 18 0.7373146 451 21 0.5628671 182 12 0.716384 1475 9 0.681532 753 22 0.740553 477 17 0.6731069 721 23 0.724539 240 17 0.676982 305 14 0.726883 447 22 0.731513 280 23 0.748885 326 20 0.7015590 677 23 0.6286485 320 18 0.594621 211 12 0.736909 498 21 0.6967171 804 23 0.664316 774 23 0.721839 848 23 0.6054013 579 23 0.5879752 340 21 0.5787677 461 16 0.574470 85 7 0.524121 497 19 0.6190109 682 21 0.726002 507 21 0.6954417 729 23 0.6244975 656 23 0.7010673 546 20 0.758362 625 23 0.7965533 0.700848 0.7388329 0.798712 0.8400304 0.744150 0.741202 0.7895375 0.7507483 0.8555905 0.7828949 0.740740 0.7344208 0.770681 0.7964699 0.6641736 0.786037 0.775175 0.7862868 0.7528147 0.807233 0.752560 0.798168 0.7815962 0.8490592 0.7927834 0.767525 0.757611 0.799928 0.7305095 0.7455766 0.7558248 0.6882585 0.61920048 0.61381367 0.59207860 0.582909 0.7037392 0.7653327 0.744017 0.7652820 0.7580146 0.7989319 8 0.792865 0.7455497 0.01347906 23 0.6620270 0.6740459 -0.01201888 0.4533881 8.0310e-01 insignificant 1.00000 1.0000e+00 insignificant 0.8609425 7.3367e-01 insignificant 1.00000 1.0000e+00 insignificant 0.00016382 0.9932680 insignificant 1.00000 insignificant 0.793115 0.6055219 1.3542e-01 21 0.6706598 0.5606759 0.10998398 7.6812e-18 9.9997e-01 weaklyHypermeth 9.1443e-17 1.0000e+00 weaklyHypermeth 1.4445e-06 9.9998e-01 weaklyHypermeth 1.6994e-05 1.0000e+00 weaklyHypermeth 0.11465723 1.7547e-05 weaklyHypermeth 3.5810e-04 weaklyHypermeth 0.793659 0.7397976 0.01218775 22 0.6948535 0.6676896 0.0271639 1.5466e-02 2.0030e-01 weaklyHypermeth 1.4454e-01 1.0000e+00 insignificant 2.4647e-01 1.2626e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00479254 8.5867e-01 insignificant 1.0000e+00 insignificant 0.7455466 0.6055219 0.1233396 21 0.6746442 0.5606759 0.1139684 3.1861e-11 9.9942e-01 weaklyHypermeth 3.2183e-10 1.0000e+00 weaklyHypermeth 8.1987e-06 1.0000e+00 weaklyHypermeth 9.6455e-05 1.0000e+00 weaklyHypermeth 0.11449341 3.3224e-05 weaklyHypermeth 6.1987e-04 weaklyHypermeth 0.7453144 0.7397976 0.00157763 22 0.6753481 0.6676896 0.00765850 8.8025e-01 1.7891e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3021e-01 5.8611e-01 insignificant 1.0000e+00 1.0000000 insignificant -4.9564e-03 8.5393e-01 insignificant 1.00000000 insignificant 0.6069803 0.7399543 -0.1152938 21 0.6170315 0.6781702 -0.0611388 1.0000e+00 7.5295e-07 weaklyHypometh 1.0000e+00 8.1843e-06 weaklyHypometh 1.0000e+00 6.8912e-04 weaklyHypometh 1.0000e+00 7.4099e-03 weaklyHypometh -0.1194498 2.6852e-03 weaklyHypometh 3.0865e-02 weaklyHypometh chr17 1232150 1233150 49653 ENSG00000209456 0.850162 202 9 0.833684 136 7 0.687947 155 9 0.879610 199 9 0.8090829 85 7 0.756732 377 9 0.753390 112 9 0.802878 132 6 0.7570028 94 7 0.935923 100 5 0.747792 203 9 0.901940 52 5 0.8045374 130 9 0.8446970 30 2 0.8345501 124 7 0.8273810 52 6 0.946154 51 5 0.893987 152 7 0.818769 192 7 0.8027084 319 9 0.835354 53 4 0.899471 86 6 0.868532 166 7 0.763938 73 7 0.855556 60 6 0.8523238 168 9 0.6881248 81 6 0.778274 42 4 0.850988 105 7 0.7960323 214 9 0.823126 204 9 0.820547 480 9 0.7529601 172 6 0.5526851 124 7 0.8425387 243 7 0.754762 32 3 0.859289 89 9 0.7700106 191 9 0.892356 214 7 0.9268592 173 7 0.9061830 172 7 0.7580085 183 7 0.797905 231 7 0.8532041 0.818273 0.7284798 0.908466 0.8359520 0.836035 0.776132 0.7928466 0.7975636 0.8940678 0.8972645 0.859560 0.8735826 0.851317 0.8866149 0.7765915 0.952470 0.891938 0.8355846 0.8624448 0.913190 0.871944 0.917547 0.8476267 0.8837238 0.8605026 0.811555 0.864213 0.836548 0.8461930 0.8370797 0.8578696 0.8147304 0.68971294 0.79804130 0.80130157 0.836765 0.8289332 0.9034973 0.918327 0.9185268 0.8331068 0.8926194 4 0.838799 0.8481524 -0.01281587 9 0.8081885 0.7769641 0.03122431 0.9398767 5.8833e-01 insignificant 1.00000 1.0000e+00 insignificant 0.8964543 4.7186e-01 insignificant 1.00000 1.0000e+00 insignificant 0.00509096 0.8186056 insignificant 1.00000 insignificant 0.838464 0.8084606 3.1174e-02 7 0.7733136 0.6915749 0.08173873 1.1442e-02 6.9378e-01 weaklyHypermeth 4.7876e-02 1.0000e+00 weaklyHypermeth 5.3368e-02 6.9621e-01 insignificant 2.4369e-01 1.0000e+00 insignificant 0.06907215 1.9088e-01 insignificant 7.5122e-01 insignificant 0.838464 0.8951696 -0.05209315 7 0.7733136 0.8125353 -0.0392216 9.9758e-01 6.6481e-04 weaklyHypometh 1.0000e+00 3.7200e-02 weaklyHypometh 9.9711e-01 2.1214e-03 weaklyHypometh 1.0000e+00 1.3323e-01 insignificant -0.03181606 4.1478e-01 insignificant 1.0000e+00 insignificant 0.8481159 0.8084606 0.0438665 7 0.7545940 0.6915749 0.0630191 6.1826e-04 2.1858e-01 weaklyHypermeth 3.2034e-03 1.0000e+00 weaklyHypermeth 3.9523e-02 7.6150e-01 weaklyHypermeth 1.8556e-01 1.0000e+00 insignificant 0.06398119 2.2384e-01 insignificant 8.0520e-01 insignificant 0.8481159 0.8951696 -0.03879386 7 0.7545940 0.8125353 -0.05794126 9.9952e-01 5.3210e-04 weaklyHypometh 1.0000e+00 3.5473e-02 weaklyHypometh 9.9967e-01 4.1956e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant -3.6907e-02 3.5481e-01 insignificant 1.00000000 insignificant 0.8084606 0.8951696 -0.0795238 7 0.6915749 0.8125353 -0.1209603 9.8416e-01 6.4037e-04 weaklyHypometh 1.0000e+00 4.1049e-03 weaklyHypometh 9.8818e-01 1.1029e-02 weaklyHypometh 1.0000e+00 7.3040e-02 weaklyHypometh -0.1008882 1.0363e-01 insignificant 4.5254e-01 insignificant chr17 1312450 1313450 49659 CRK ENSG00000167193 0.903728 587 9 0.719515 622 10 0.726847 211 10 0.806362 575 11 0.7521825 106 7 0.777381 548 10 0.736175 216 10 0.821735 364 10 0.7325139 220 11 0.648744 241 11 0.717825 342 10 0.813585 68 5 0.8604013 284 9 0.8362814 208 8 0.7563895 305 9 0.7583333 41 4 0.875558 479 3 0.721451 1147 10 0.780119 779 11 0.7238405 508 7 0.841187 128 6 0.842189 182 6 0.756683 277 11 0.834722 107 7 0.854792 509 8 0.8352021 537 10 0.8774964 224 8 0.553755 71 5 0.858645 450 10 0.7527206 427 10 0.771088 703 11 0.792420 474 10 0.6083423 330 10 0.6888070 375 11 0.6483214 299 10 0.336580 53 4 0.621037 186 7 0.7782636 580 11 0.802624 438 8 0.7803134 482 10 0.8241579 748 9 0.7883620 667 9 0.792469 434 11 0.9079389 0.840576 0.6907719 0.886652 0.9116009 0.880857 0.879603 0.8711149 0.8721898 0.8374434 0.8705730 0.798637 0.9224897 0.884014 0.8647958 0.9257812 0.843910 0.843761 0.8894516 0.8708386 0.851892 0.897260 0.826162 0.8960503 0.8865385 0.9022315 0.882613 0.807763 0.887843 0.8573470 0.8964708 0.8852264 0.7315188 0.82761498 0.73981058 0.49694235 0.698893 0.8689725 0.8744846 0.865985 0.8496897 0.8669274 0.8770003 4 0.870503 0.8754892 -0.01602333 10 0.7224653 0.7933403 -0.07087495 0.9986833 6.9166e-02 insignificant 1.00000 7.3581e-01 insignificant 0.9735471 3.3397e-01 insignificant 1.00000 1.0000e+00 insignificant -0.02412651 0.4155763 insignificant 1.00000 insignificant 0.870281 0.7350521 1.0924e-01 10 0.7224653 0.5528835 0.16958179 7.4085e-08 9.9846e-01 weaklyHypermeth 5.1093e-07 1.0000e+00 weaklyHypermeth 3.7666e-05 9.9999e-01 weaklyHypermeth 3.3333e-04 1.0000e+00 weaklyHypermeth 0.15988992 4.5850e-02 weaklyHypermeth 2.4918e-01 insignificant 0.871293 0.8714337 -0.00021142 9 0.7982892 0.8011156 -0.0028264 5.4329e-01 4.2714e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.6661e-01 6.8613e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02413675 1.4783e-01 insignificant 9.3492e-01 insignificant 0.8756121 0.7358594 0.1359075 10 0.8005637 0.6450308 0.1555329 9.6133e-09 9.9989e-01 weaklyHypermeth 7.8798e-08 1.0000e+00 weaklyHypermeth 1.2833e-05 1.0000e+00 weaklyHypermeth 1.4259e-04 1.0000e+00 weaklyHypermeth 0.18401643 2.7542e-02 weaklyHypermeth 1.6592e-01 insignificant 0.8761344 0.8714337 0.01438532 9 0.8213941 0.8011156 0.02027856 1.0483e-01 9.7797e-01 insignificant 6.5901e-01 1.0000e+00 insignificant 4.1632e-01 9.4207e-01 insignificant 1.0000e+00 1.0000000 insignificant -1.0244e-05 9.9970e-01 insignificant 1.00000000 insignificant 0.7370737 0.8714337 -0.1179992 9 0.7036700 0.8011156 -0.0974456 9.7566e-01 8.2036e-03 weaklyHypometh 1.0000e+00 4.2951e-02 weaklyHypometh 9.9989e-01 6.1552e-03 weaklyHypometh 1.0000e+00 4.5594e-02 weaklyHypometh -0.1840267 2.8806e-02 weaklyHypometh 1.7458e-01 insignificant chr17 1417250 1418250 49664 PITPNA ENSG00000174238 0.694532 293 6 0.540410 360 6 0.591752 206 6 0.722613 263 6 0.6840835 143 6 0.713944 419 6 0.697159 199 6 0.660437 243 6 0.6860214 179 6 0.669463 146 6 0.693098 435 6 0.680708 114 6 0.6555357 240 6 0.6922351 125 6 0.6401179 213 6 0.7034864 91 6 0.554382 80 4 0.709502 288 7 0.773822 332 4 0.7241486 482 7 0.680990 122 6 0.799707 128 6 0.592284 236 6 0.756591 156 6 0.743037 104 4 0.7134563 420 6 0.7099737 233 5 0.589815 103 7 0.699084 252 6 0.6704628 405 6 0.735355 412 6 0.664654 408 6 0.4846513 195 6 0.6538844 177 6 0.6362533 258 7 0.748397 59 6 0.643494 250 6 0.6231535 331 6 0.579516 259 6 0.7472681 313 6 0.6563767 274 6 0.6544731 211 6 0.752378 252 6 0.8044491 0.753666 0.6318931 0.764424 0.6948413 0.771488 0.731414 0.7623940 0.8003256 0.7720136 0.7629096 0.589077 0.7758304 0.785403 0.7526794 0.7665845 0.461111 0.769746 0.8379592 0.7949296 0.829640 0.796640 0.707394 0.8296496 0.7940999 0.7986084 0.768289 0.737383 0.713286 0.8012261 0.7881085 0.7592603 0.6758840 0.67261786 0.62530989 0.67120667 0.661229 0.7089760 0.7205413 0.782207 0.8053513 0.7112372 0.7953203 6 0.740054 0.7569654 -0.00837079 6 0.6573124 0.6297433 0.02756909 0.5859116 3.3168e-01 insignificant 1.00000 1.0000e+00 insignificant 0.8481900 7.6650e-02 insignificant 1.00000 9.4212e-01 insignificant -0.02191159 0.3300425 insignificant 1.00000 insignificant 0.740054 0.6661417 8.4117e-02 6 0.6573124 0.6473050 0.01000739 8.5699e-04 9.5453e-01 weaklyHypermeth 4.1401e-03 1.0000e+00 weaklyHypermeth 2.6682e-03 9.9389e-01 weaklyHypermeth 1.6995e-02 1.0000e+00 weaklyHypermeth 0.04273365 2.8790e-01 insignificant 1.0000e+00 insignificant 0.740054 0.7226891 0.00018082 6 0.6573124 0.5661662 0.0911462 4.8879e-02 1.3904e-01 weaklyHypermeth 3.8487e-01 1.0000e+00 insignificant 2.5620e-01 1.1598e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00362989 9.2084e-01 insignificant 1.0000e+00 insignificant 0.7569654 0.6661417 0.0932273 6 0.6297433 0.6473050 -0.0175617 2.1308e-04 9.4109e-01 weaklyHypermeth 1.1904e-03 1.0000e+00 weaklyHypermeth 4.8601e-04 9.9535e-01 weaklyHypermeth 3.8269e-03 1.0000e+00 weaklyHypermeth 0.06464524 1.3704e-01 insignificant 5.5257e-01 insignificant 0.7569654 0.7226891 0.01598159 6 0.6297433 0.5661662 0.06357709 2.1032e-01 5.6691e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.8782e-01 8.2250e-01 insignificant 1.0000e+00 1.0000000 insignificant 1.8282e-02 6.3799e-01 insignificant 1.00000000 insignificant 0.6661417 0.7226891 -0.0786480 6 0.6473050 0.5661662 0.0811388 9.8803e-01 1.0803e-02 weaklyHypometh 1.0000e+00 5.4559e-02 weaklyHypometh 9.9087e-01 1.6530e-02 weaklyHypometh 1.0000e+00 1.0331e-01 insignificant -0.0463635 3.5409e-01 insignificant 1.0000e+00 insignificant chr17 1440050 1441050 49666 PITPNA ENSG00000174238 0.919345 251 5 0.826338 184 6 0.849217 143 6 0.926082 294 6 0.9571429 122 6 0.976961 295 5 0.963389 104 5 0.882897 125 6 0.9600000 82 3 0.945574 136 4 0.917859 207 6 0.803030 36 3 0.8928571 128 3 0.9345238 71 3 0.9732040 127 5 1.0000000 32 3 NA 0 0 0.898681 684 5 0.919478 414 6 0.9549671 295 5 0.885697 79 6 0.879630 93 4 0.832075 166 6 0.629630 38 3 0.890142 90 6 0.9389548 174 5 0.9110278 136 5 0.604167 30 3 0.897222 223 5 0.8476113 198 5 0.905496 240 6 0.947624 223 5 0.5793226 157 6 0.4931136 296 6 0.5544974 85 5 0.921569 29 1 0.578289 134 5 0.5049102 242 6 0.886454 228 5 0.8694444 230 5 0.9336421 325 5 0.7964481 266 3 0.930626 218 5 0.8921477 0.799174 0.8526993 0.932049 0.9663653 0.967912 0.933379 0.8922493 0.9387342 0.9313978 0.9190172 0.936709 0.8593412 0.950196 0.9508759 0.9960199 NA 0.876648 0.9057526 0.9543474 0.888431 0.836621 0.855867 0.8706048 0.8560959 0.9008856 0.878773 0.819620 0.941034 0.8880388 0.9249818 0.9102314 0.6068541 0.63319712 0.39997321 1.00000000 0.663399 0.4866939 0.8432507 0.846156 0.8956825 0.8567719 0.9065996 3 0.911796 0.8958580 0.01526747 5 0.9123465 0.8925968 0.01974962 0.1519014 9.6859e-01 insignificant 1.00000 1.0000e+00 insignificant 0.0257410 9.8507e-01 weaklyHypermeth 1.00000 1.0000e+00 insignificant 0.07369430 0.0516862 lowCoverage 1.00000 lowCoverage 0.911796 0.5864263 3.1918e-01 5 0.9123465 0.5688139 0.34353260 2.5265e-27 9.9994e-01 hypermethylated 4.6787e-26 1.0000e+00 hypermethylated 3.1170e-06 9.9921e-01 hypermethylated 3.3516e-05 1.0000e+00 hypermethylated 0.31585032 4.1695e-03 lowCoverage 3.4459e-02 lowCoverage 0.911796 0.8750988 0.03518773 5 0.9123465 0.8831387 0.0292078 1.4843e-02 9.7075e-01 weaklyHypermeth 1.4140e-01 1.0000e+00 insignificant 2.9076e-03 9.7009e-01 weaklyHypermeth 4.8460e-02 1.0000e+00 weaklyHypermeth 0.03781089 2.2216e-01 lowCoverage 1.0000e+00 lowCoverage 0.8958580 0.5864263 0.3044545 6 0.8925968 0.5688139 0.3237830 8.7777e-17 9.9987e-01 hypermethylated 1.2191e-15 1.0000e+00 hypermethylated 1.1446e-04 9.9880e-01 hypermethylated 1.0501e-03 1.0000e+00 hypermethylated 0.24215603 1.1132e-02 lowCoverage 7.9514e-02 lowCoverage 0.8958580 0.8750988 0.02166982 5 0.8925968 0.8831387 0.00945818 2.6109e-01 7.9164e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.5391e-01 8.2741e-01 insignificant 1.0000e+00 1.0000000 insignificant -3.5883e-02 3.9626e-01 lowCoverage 1.00000000 lowCoverage 0.5864263 0.8750988 -0.2812137 5 0.5688139 0.8831387 -0.3143248 9.9811e-01 8.0487e-09 hypomethylated 1.0000e+00 1.0319e-07 hypomethylated 9.9481e-01 1.4976e-03 weaklyHypometh 1.0000e+00 1.3615e-02 weaklyHypometh -0.2780394 6.2568e-03 lowCoverage 5.3477e-02 lowCoverage chr17 1467750 1468750 49667 ENSG00000209464 0.916541 345 8 0.819768 460 13 0.652843 336 13 0.876016 445 11 0.9330895 147 8 0.829270 456 10 0.876811 150 8 0.900387 420 11 0.8486057 266 9 0.936613 228 8 0.913307 429 11 0.819024 66 8 0.9087202 406 8 0.7514724 173 7 0.8970339 338 7 0.8437500 52 6 0.337500 19 3 0.809018 585 7 0.853028 844 8 0.9537422 427 8 0.795818 129 8 0.523934 148 4 0.849239 318 10 0.913925 176 8 0.871918 141 8 0.9045889 584 14 0.7984969 219 9 0.880392 78 7 0.915055 558 7 0.9430335 634 12 0.955106 928 15 0.961077 560 11 0.4620445 542 14 0.3975589 305 8 0.4955808 337 11 0.666667 45 7 0.301691 278 9 0.5748100 391 14 0.820696 377 8 0.6465395 456 11 0.7056881 377 9 0.8061919 417 7 0.729087 398 11 0.8432595 0.824641 0.6126775 0.844319 0.8765069 0.792797 0.831783 0.8679112 0.8124165 0.9108394 0.8898412 0.722862 0.8341551 0.815114 0.8131978 0.9361736 0.583197 0.572334 0.9258667 0.8929558 0.925044 0.530871 0.824344 0.9107378 0.8303140 0.8704557 0.792860 0.873646 0.872767 0.9091476 0.9293997 0.9168795 0.4611032 0.40323182 0.27541092 0.56984649 0.276099 0.5239444 0.7089301 0.536567 0.6098261 0.6195855 0.6434574 6 0.833991 0.8968911 -0.05143617 8 0.7829529 0.8872837 -0.10433085 0.9998857 1.3355e-02 weaklyHypometh 1.00000 3.1054e-01 insignificant 0.9770371 1.8912e-01 insignificant 1.00000 1.0000e+00 insignificant -0.02555481 0.5826163 insignificant 1.00000 insignificant 0.834219 0.4220232 4.0668e-01 8 0.8495720 0.4691090 0.38046299 1.0701e-37 1.0000e+00 hypermethylated 2.7439e-36 1.0000e+00 hypermethylated 8.1972e-16 1.0000e+00 hypermethylated 4.5540e-14 1.0000e+00 hypermethylated 0.35076830 3.0981e-04 hypermethylated 3.9216e-03 hypermethylated 0.834244 0.6386555 0.16864566 8 0.8584207 0.7636822 0.0947385 8.8590e-10 7.0717e-01 weaklyHypermeth 3.6580e-08 1.0000e+00 weaklyHypermeth 4.7347e-06 9.5153e-01 weaklyHypermeth 1.8939e-04 1.0000e+00 weaklyHypermeth 0.09218646 5.9784e-02 insignificant 5.8162e-01 insignificant 0.8968449 0.4220232 0.4510446 12 0.8731942 0.4691090 0.4040852 1.8013e-36 1.0000e+00 hypermethylated 6.6715e-35 1.0000e+00 hypermethylated 1.8276e-13 1.0000e+00 hypermethylated 1.0153e-11 1.0000e+00 hypermethylated 0.37632311 1.7172e-04 hypermethylated 2.4887e-03 hypermethylated 0.8968449 0.6384768 0.20617189 9 0.8731942 0.7489123 0.12428187 1.4225e-14 9.4233e-01 hypermethylated 1.1854e-12 1.0000e+00 hypermethylated 2.8313e-06 9.4899e-01 hypermethylated 1.8875e-04 1.0000000 hypermethylated 1.1774e-01 2.7561e-02 weaklyHypermeth 0.44452885 insignificant 0.4220232 0.6384768 -0.2240134 9 0.4691090 0.7489123 -0.2798033 1.0000e+00 1.7873e-09 hypomethylated 1.0000e+00 2.4824e-08 hypomethylated 1.0000e+00 7.0490e-06 hypomethylated 1.0000e+00 1.5664e-04 hypomethylated -0.2585818 2.9936e-03 weaklyHypometh 3.3262e-02 weaklyHypometh chr17 1467950 1468950 49668 ENSG00000209464 0.886192 330 7 0.902414 434 11 0.696660 303 11 0.900708 421 7 0.8948549 124 7 0.775049 405 6 0.877616 126 7 0.890177 372 7 0.8494476 253 7 0.924202 215 7 0.915140 358 7 0.767316 56 7 0.8565603 394 7 0.7204065 171 7 0.8381961 330 7 0.8437500 52 6 0.337500 19 3 0.756932 580 7 0.938524 831 7 0.9383230 414 7 0.794918 113 7 0.369234 142 4 0.838935 308 10 0.936168 165 7 0.852299 93 4 0.9082981 540 10 0.7151732 187 7 0.850490 74 7 0.890785 552 7 0.9396690 617 11 0.966746 870 11 0.946923 506 7 0.4734667 515 11 0.4747354 289 7 0.5833333 182 7 0.666667 45 7 0.281704 248 7 0.5111045 361 10 0.826752 359 7 0.6830816 390 7 0.7803876 348 7 0.8061919 417 7 0.797687 346 7 0.8422215 0.824498 0.6139466 0.843288 0.8756891 0.791638 0.830669 0.8681882 0.8121203 0.9113526 0.8894697 0.721026 0.8330567 0.813889 0.8119607 0.9362583 0.580944 0.570009 0.9253758 0.8922469 0.925494 0.529972 0.823181 0.9101466 0.8291902 0.8695978 0.791902 0.872809 0.871924 0.9090553 0.9299918 0.9163290 0.4575343 0.40391547 0.27337170 0.56865342 0.272188 0.5207917 0.7077384 0.534233 0.6083459 0.6178540 0.6416720 6 0.830747 0.8948379 -0.05209730 7 0.8140798 0.8721518 -0.05807200 0.9986800 5.9013e-03 weaklyHypometh 1.00000 1.8441e-01 insignificant 0.9629419 6.9820e-02 insignificant 1.00000 9.2663e-01 insignificant -0.00863792 0.8789864 insignificant 1.00000 insignificant 0.830854 0.4329268 4.1239e-01 7 0.8402531 0.4837315 0.35652167 2.0376e-27 1.0000e+00 hypermethylated 3.8445e-26 1.0000e+00 hypermethylated 1.1164e-11 1.0000e+00 hypermethylated 2.7910e-10 1.0000e+00 hypermethylated 0.32699672 5.3131e-04 hypermethylated 5.9698e-03 hypermethylated 0.830881 0.6313240 0.16887205 7 0.8525414 0.8205630 0.0319784 3.5802e-05 3.8077e-01 weaklyHypermeth 6.0682e-04 1.0000e+00 weaklyHypermeth 1.7137e-03 7.2921e-01 weaklyHypermeth 3.4974e-02 1.0000e+00 weaklyHypermeth 0.04667842 2.5179e-01 insignificant 1.0000e+00 insignificant 0.8948127 0.4329268 0.4562498 10 0.8614978 0.4837315 0.3777663 6.2898e-26 1.0000e+00 hypermethylated 1.3977e-24 1.0000e+00 hypermethylated 1.6688e-10 1.0000e+00 hypermethylated 5.2151e-09 1.0000e+00 hypermethylated 0.33563465 4.2875e-04 hypermethylated 5.2286e-03 hypermethylated 0.8948127 0.6311255 0.20593521 7 0.8614978 0.8056099 0.05588790 1.0679e-08 6.8100e-01 hypermethylated 4.4494e-07 1.0000e+00 hypermethylated 4.1696e-04 7.1557e-01 hypermethylated 1.1269e-02 1.0000000 hypermethylated 5.5316e-02 3.1657e-01 insignificant 1.00000000 insignificant 0.4329268 0.6311255 -0.2307571 7 0.4837315 0.8056099 -0.3218784 1.0000e+00 4.6215e-09 hypomethylated 1.0000e+00 6.1621e-08 hypomethylated 1.0000e+00 1.1003e-05 hypomethylated 1.0000e+00 2.2006e-04 hypomethylated -0.2803183 1.9426e-03 weaklyHypometh 2.5229e-02 weaklyHypometh chr17 1554850 1555850 49669 PRPF8 ENSG00000174231 0.679388 195 6 0.737977 363 4 0.761111 100 4 0.837524 253 5 0.9163881 83 4 0.842970 176 6 0.902183 161 4 0.913139 160 4 0.8451206 143 4 0.931164 73 4 0.890652 391 4 0.956845 55 4 0.7779329 162 4 0.8336927 129 4 0.9164918 153 4 0.7090909 32 4 1.000000 1291 2 0.819008 224 5 0.841179 663 6 0.8345299 187 6 0.901009 67 4 0.759284 58 4 0.864120 128 5 0.843620 95 4 0.907967 49 4 0.8297234 411 6 0.8194444 52 4 0.975000 27 2 0.811541 148 4 0.7305437 312 6 0.801477 484 6 0.780792 217 6 0.8001001 214 4 0.8104167 74 4 0.6042290 554 4 1.000000 4 0 0.929167 116 4 0.7792101 363 6 0.773303 254 6 0.7003690 259 6 0.6934592 199 5 0.6278509 168 2 0.875643 170 5 0.8734662 0.739024 0.7935316 0.891836 0.9014534 0.848341 0.869260 0.8848510 0.8440614 0.9306051 0.8943148 0.967555 0.8047126 0.821282 0.9207591 0.6261204 0.972903 0.899296 0.8766580 0.8513554 0.861476 0.765409 0.902633 0.9070515 0.8708146 0.8791299 0.839854 0.959624 0.823245 0.8403759 0.8249678 0.8675484 0.8270481 0.88204225 0.64051840 0.96502655 0.881847 0.9410992 0.8322855 0.861556 0.7615347 0.7249815 0.8404511 2 0.892829 0.8450635 0.03812889 4 0.8184852 0.8050430 0.01344217 0.0978880 8.8734e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.6669581 7.7833e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.01194243 0.6650582 lowCoverage 1.00000 lowCoverage 0.892850 0.7652830 1.2333e-01 4 0.8444158 0.7598955 0.08452031 3.3064e-03 9.9991e-01 lowCoverage 1.4761e-02 1.0000e+00 lowCoverage 8.7564e-01 7.7796e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.02679884 6.6395e-01 lowCoverage 1.0000e+00 lowCoverage 0.892850 0.7986641 0.08115279 4 0.8444158 0.7376980 0.1067179 1.8161e-02 9.7018e-01 lowCoverage 1.6361e-01 1.0000e+00 lowCoverage 2.7303e-02 9.7083e-01 lowCoverage 2.8613e-01 1.0000e+00 lowCoverage 0.11319418 5.1993e-02 lowCoverage 5.4481e-01 lowCoverage 0.8450635 0.7651057 0.0799207 5 0.8050430 0.7198781 0.0851649 8.8347e-03 9.9749e-01 weaklyHypermeth 3.7121e-02 1.0000e+00 weaklyHypermeth 7.6508e-01 6.7935e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01485641 8.0952e-01 lowCoverage 1.0000e+00 lowCoverage 0.8447266 0.7996183 0.03932834 5 0.7287822 0.8329857 -0.10420349 1.6518e-01 9.7883e-01 insignificant 9.2799e-01 1.0000e+00 insignificant 1.0982e-01 9.4614e-01 insignificant 8.1958e-01 1.0000000 insignificant 1.0125e-01 7.4089e-02 lowCoverage 0.72839801 lowCoverage 0.7652830 0.7986641 -0.0449910 5 0.7598955 0.7376980 0.0221976 9.0937e-01 1.8288e-01 insignificant 1.0000e+00 6.5785e-01 insignificant 2.8174e-01 9.0623e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0863953 2.4840e-01 lowCoverage 8.6251e-01 lowCoverage chr17 1579150 1580150 49670 WDR81 ENSG00000167716 0.788421 461 10 0.663083 425 12 0.695858 123 10 0.698392 328 9 0.7746454 148 6 0.790180 486 12 0.666266 183 12 0.776376 227 10 0.7639648 117 11 0.732070 177 8 0.756152 428 12 0.761364 47 3 0.8172514 195 9 0.7594995 154 8 0.7021978 175 9 0.3541176 71 8 0.767159 2582 3 0.710831 716 7 0.726439 581 10 0.7806395 435 9 0.829365 90 10 0.995614 157 3 0.852659 161 4 0.789744 85 10 0.761555 343 9 0.6564775 438 12 0.7779633 130 8 0.716667 33 1 0.682327 358 12 0.6974430 447 11 0.771595 790 11 0.735881 467 12 0.7578304 280 9 0.5538489 340 9 0.7139117 274 12 0.651786 64 2 0.617800 238 12 0.6691255 443 12 0.716069 278 10 0.8079888 313 10 0.7197884 524 9 0.6390654 493 3 0.822915 384 10 0.8811959 0.796514 0.7919354 0.812844 0.8461663 0.875074 0.779441 0.8976621 0.8338677 0.8614230 0.8577025 0.881794 0.8937024 0.858570 0.8839943 0.7014479 0.745623 0.864160 0.8693211 0.8997040 0.909540 0.972994 0.913637 0.9108138 0.8664620 0.8969930 0.887840 0.864674 0.796084 0.8635123 0.8830921 0.8387930 0.8675228 0.73042277 0.84725853 0.77963651 0.776020 0.7887118 0.8527492 0.883654 0.8703916 0.8680291 0.9149786 3 0.800720 0.8942555 -0.09336165 12 0.6763120 0.7151202 -0.03880821 0.7166800 5.8115e-03 weaklyHypometh 1.00000 1.8441e-01 insignificant 0.9603123 5.3607e-02 insignificant 1.00000 9.0859e-01 insignificant -0.04802882 0.1718782 insignificant 1.00000 insignificant 0.800720 0.8383160 -4.5912e-02 12 0.6763120 0.6326889 0.04362310 2.0164e-01 2.0745e-01 insignificant 6.6330e-01 1.0000e+00 insignificant 1.5046e-01 8.9450e-01 insignificant 5.9705e-01 1.0000e+00 insignificant 0.06352823 1.0865e-01 insignificant 4.8884e-01 insignificant 0.800944 0.9056225 -0.10771232 10 0.7056973 0.7432808 -0.0375835 7.8953e-01 9.0257e-03 weaklyHypometh 1.0000e+00 2.0990e-01 insignificant 9.6270e-01 1.2662e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01691992 6.8416e-01 insignificant 1.0000e+00 insignificant 0.8942555 0.8383160 0.0412022 12 0.7151202 0.6326889 0.0824313 3.6625e-03 7.2467e-01 weaklyHypermeth 1.6878e-02 1.0000e+00 weaklyHypermeth 4.7700e-03 9.7820e-01 weaklyHypermeth 2.7733e-02 1.0000e+00 weaklyHypermeth 0.11155706 1.4432e-02 weaklyHypermeth 9.9532e-02 weaklyHypermeth 0.8949026 0.9056225 -0.00483060 10 0.7426402 0.7432808 -0.00064056 7.3732e-01 6.3669e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.3177e-01 8.5779e-01 insignificant 1.0000e+00 1.0000000 insignificant 3.1109e-02 4.8490e-01 insignificant 1.00000000 insignificant 0.8395591 0.9056225 -0.0547059 10 0.6756370 0.7432808 -0.0676438 9.6989e-01 1.6326e-02 weaklyHypometh 1.0000e+00 7.7009e-02 weaklyHypometh 9.9418e-01 4.9036e-02 weaklyHypometh 1.0000e+00 2.5539e-01 insignificant -0.0804482 1.0685e-01 insignificant 4.6183e-01 insignificant chr17 1603250 1604250 49671 SERPINF2 ENSG00000167711 0.698461 352 12 0.700532 306 14 0.657875 194 12 0.715084 345 14 0.6846255 158 14 0.725867 456 13 0.746537 243 12 0.645178 251 10 0.6799296 196 12 0.664909 120 13 0.708954 361 13 0.723776 72 8 0.7576673 164 12 0.7362774 184 11 0.6719287 178 11 0.7014652 61 5 0.519821 115 3 0.736956 588 11 0.653227 392 10 0.6928039 296 14 0.764914 85 7 0.834609 57 4 0.768611 185 9 0.631337 145 10 0.664512 217 10 0.7100608 431 14 0.7614581 118 7 0.650611 84 8 0.678532 262 14 0.7093054 455 14 0.734808 578 12 0.753469 357 14 0.6125337 322 14 0.5812941 224 12 0.5587223 214 11 0.460000 34 2 0.713825 256 12 0.6327519 327 12 0.762234 235 9 0.7151529 372 14 0.6959653 309 14 0.7021178 217 10 0.723694 313 12 0.8709709 0.847023 0.7777547 0.818082 0.8028428 0.855799 0.825818 0.8531532 0.8244621 0.8276093 0.8168448 0.867539 0.8119739 0.848131 0.7866277 0.7508990 0.812145 0.826859 0.7781921 0.8209919 0.814108 0.798991 0.852678 0.8326731 0.7965278 0.8395425 0.815536 0.762738 0.825091 0.8324139 0.8723674 0.8297188 0.7459700 0.72792143 0.73987193 0.67968483 0.776911 0.7845635 0.8660785 0.865181 0.7794606 0.8076681 0.8417321 5 0.804650 0.8301379 -0.01369533 12 0.6919693 0.7016967 -0.00972736 0.6512424 5.8345e-01 insignificant 1.00000 1.0000e+00 insignificant 0.7274153 6.3335e-01 insignificant 1.00000 1.0000e+00 insignificant -0.03075849 0.1492483 insignificant 1.00000 insignificant 0.804650 0.7458243 6.3914e-02 12 0.6919693 0.6049328 0.08703652 1.0833e-08 9.9019e-01 weaklyHypermeth 7.8499e-08 1.0000e+00 weaklyHypermeth 3.7233e-05 9.9796e-01 weaklyHypermeth 3.3244e-04 1.0000e+00 weaklyHypermeth 0.09790587 3.4808e-02 weaklyHypermeth 2.0237e-01 insignificant 0.805296 0.8035961 0.00341553 14 0.7096496 0.7180103 -0.0083606 2.8541e-01 2.7488e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.5749e-01 1.9211e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02873911 1.0284e-01 insignificant 7.6664e-01 insignificant 0.8301379 0.7458243 0.0775348 12 0.7016967 0.6049328 0.0967639 4.5716e-06 9.9991e-01 weaklyHypermeth 2.8573e-05 1.0000e+00 weaklyHypermeth 3.9741e-04 9.9993e-01 weaklyHypermeth 3.1540e-03 1.0000e+00 weaklyHypermeth 0.12866436 1.0988e-02 weaklyHypermeth 7.9514e-02 weaklyHypermeth 0.8313659 0.8035961 0.01265174 12 0.7250321 0.7180103 0.00702185 4.1464e-01 4.0601e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.9169e-01 2.3277e-01 insignificant 1.0000e+00 1.0000000 insignificant 2.0194e-03 9.2332e-01 insignificant 1.00000000 insignificant 0.7479971 0.8035961 -0.0637048 12 0.6481423 0.7180103 -0.0698680 9.8144e-01 1.3499e-04 weaklyHypometh 1.0000e+00 1.0384e-03 weaklyHypometh 9.9960e-01 1.1669e-03 weaklyHypometh 1.0000e+00 1.1008e-02 weaklyHypometh -0.1266450 1.2693e-02 weaklyHypometh 9.1977e-02 weaklyHypometh chr17 1613750 1614750 49672 SERPINF1 ENSG00000132386 0.672285 157 5 0.723564 165 5 0.815660 139 5 0.893800 212 5 0.8986538 121 5 0.894569 298 5 0.796494 184 5 0.843953 114 5 0.8306474 166 5 0.822339 119 4 0.798096 240 5 0.882381 103 5 0.8005136 162 5 0.9232464 95 5 0.8758387 134 5 0.7900855 35 4 0.826593 49 4 0.762653 209 5 0.827957 142 5 0.8778993 296 5 0.631352 57 5 0.760481 72 4 0.862321 132 4 0.799868 64 4 0.933333 55 4 0.8561067 221 5 0.7708333 83 5 0.822222 70 6 0.734216 104 5 0.9350916 175 5 0.724682 292 5 0.739832 382 5 0.3401478 134 4 0.0537546 55 4 0.5098545 217 2 0.437500 19 1 0.085727 147 5 0.3045360 236 5 0.765769 176 5 0.7217958 189 5 0.7648225 151 5 0.6394910 158 5 0.873006 223 5 0.8435606 0.909291 0.8836635 0.919903 0.9481754 0.900391 0.914929 0.8814575 0.9312938 0.9220635 0.7886300 0.855681 0.8731919 0.904326 0.9236983 0.8730823 0.825468 0.848517 0.8323371 0.8645628 0.791034 0.894228 0.864421 0.9175604 0.9194561 0.8722722 0.970188 0.898466 0.898060 0.9527886 0.9136328 0.8897636 0.1767834 0.05374040 0.64515610 0.43933054 0.131388 0.3736108 0.8863252 0.821971 0.8792801 0.8599625 0.9310194 4 0.845223 0.8717047 -0.03280738 5 0.8071802 0.7736664 0.03351373 0.6465979 9.3137e-02 insignificant 1.00000 8.3380e-01 insignificant 0.4282118 6.2758e-02 insignificant 1.00000 9.1315e-01 insignificant 0.03033318 0.3156751 lowCoverage 1.00000 lowCoverage 0.845223 0.1287129 6.7550e-01 5 0.8071802 0.2778636 0.52931654 6.6930e-49 9.9928e-01 hypermethylated 2.7888e-47 1.0000e+00 hypermethylated 9.9055e-09 9.9998e-01 hypermethylated 1.8343e-07 1.0000e+00 hypermethylated 0.53927473 6.7559e-04 lowCoverage 7.3433e-03 lowCoverage 0.845223 0.7658863 0.05935106 5 0.8071802 0.6551549 0.1520253 6.8998e-03 8.5661e-01 weaklyHypermeth 7.6664e-02 1.0000e+00 weaklyHypermeth 2.9758e-02 8.9900e-01 weaklyHypermeth 3.0366e-01 1.0000e+00 insignificant 0.07488456 1.2053e-01 lowCoverage 8.1995e-01 lowCoverage 0.8717047 0.1287129 0.7112341 5 0.7736664 0.2778636 0.4958028 1.6458e-34 9.2891e-01 hypermethylated 5.4860e-33 1.0000e+00 hypermethylated 1.9181e-07 9.9288e-01 hypermethylated 3.1444e-06 1.0000e+00 hypermethylated 0.50894155 6.0592e-04 lowCoverage 6.8081e-03 lowCoverage 0.8717047 0.7658863 0.09513637 5 0.7736664 0.6551549 0.11851156 3.4399e-04 9.8209e-01 weaklyHypermeth 4.6485e-03 1.0000e+00 weaklyHypermeth 2.2756e-03 9.9578e-01 weaklyHypermeth 4.4620e-02 1.0000000 weaklyHypermeth 4.4551e-02 3.5892e-01 lowCoverage 1.00000000 lowCoverage 0.1287129 0.7658863 -0.5752640 5 0.2778636 0.6551549 -0.3772913 9.9685e-01 3.1927e-16 hypomethylated 1.0000e+00 9.6749e-15 hypomethylated 9.9975e-01 3.8260e-05 hypomethylated 1.0000e+00 6.3767e-04 hypomethylated -0.4643902 7.9416e-04 lowCoverage 1.4181e-02 lowCoverage chr17 1642150 1643150 49675 SERPINF1 ENSG00000132386 0.965267 94 6 0.687302 80 5 0.728113 100 6 0.990000 95 5 0.7057510 149 7 0.852011 187 8 0.946866 118 6 0.707131 108 6 0.8214699 83 5 0.654167 58 3 0.948356 218 6 0.678125 59 6 0.7898657 73 5 0.9714286 22 3 0.8299974 77 5 0.7844898 72 5 0.738636 49 3 0.867230 95 3 0.840774 97 5 0.9098924 139 6 0.611111 31 3 0.713816 58 3 0.698413 30 3 0.674177 85 5 0.595238 24 3 0.9706633 99 5 0.9025518 55 5 0.622222 33 2 0.894203 63 3 0.9582615 129 5 0.644565 136 6 0.642820 240 6 0.9554500 82 5 0.7503001 51 3 0.7451923 123 5 0.833333 6 0 0.611157 127 7 0.9433333 84 6 0.814984 98 6 0.9217209 124 6 0.9788360 76 5 0.9750000 49 3 0.929769 95 4 0.9455823 0.897094 0.6793216 0.986864 0.9410204 0.917143 0.947663 0.9265377 0.9140184 0.8977401 0.9366788 0.882839 0.9223226 0.942387 0.9733074 0.8569007 0.952812 0.871608 0.9661900 0.9840848 0.669492 0.827080 0.914447 0.9362531 0.7954139 0.9458989 0.894254 0.962712 0.880146 0.9441299 0.9247605 0.9802044 0.9465693 0.91393676 0.99804433 0.80452883 0.822948 0.9497175 0.9347726 0.934390 0.9435028 0.9523305 0.9168958 2 0.902686 0.8982706 0.00093859 5 0.7888808 0.6875741 0.10130676 0.0734927 7.6194e-01 insignificant 1.00000 1.0000e+00 insignificant 0.1046774 9.5934e-01 insignificant 1.00000 1.0000e+00 insignificant 0.07684017 0.1273317 lowCoverage 1.00000 lowCoverage 0.902686 0.8942918 7.5290e-03 5 0.7888808 0.6345617 0.15431909 6.9146e-02 6.8059e-01 insignificant 2.4891e-01 1.0000e+00 insignificant 2.5108e-01 5.9537e-01 insignificant 9.3688e-01 1.0000e+00 insignificant 0.01438266 8.1430e-01 lowCoverage 1.0000e+00 lowCoverage 0.912461 0.9321267 -0.01416985 5 0.8512006 0.8326799 0.0185207 6.7792e-01 1.6226e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.0889e-01 1.3664e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.10321823 2.2153e-02 lowCoverage 3.2867e-01 lowCoverage 0.8982706 0.8942918 0.0042075 5 0.6875741 0.6345617 0.0530123 4.3235e-01 8.0039e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.4559e-01 5.1321e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.06245751 3.7763e-01 lowCoverage 1.0000e+00 lowCoverage 0.9080579 0.9321267 -0.01170380 5 0.7401875 0.8326799 -0.09249238 8.5143e-01 1.0909e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9179e-01 8.3117e-02 insignificant 1.0000e+00 1.0000000 insignificant -1.8006e-01 3.1309e-03 lowCoverage 0.14908850 lowCoverage 0.9032258 0.9321267 -0.0156849 5 0.6670070 0.8326799 -0.1656729 8.9801e-01 4.9809e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.5913e-01 5.7077e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.1176009 9.3497e-02 lowCoverage 4.1740e-01 lowCoverage chr17 1836950 1837950 49677 RTN4RL1 ENSG00000185924 0.848773 260 6 0.717207 356 6 0.730948 244 7 0.942840 258 6 0.7791130 133 6 0.918313 470 7 0.713812 179 7 0.854274 288 7 0.7403552 250 7 0.734310 216 7 0.832278 333 7 0.754008 74 6 0.9211285 330 7 0.7088357 135 5 0.8563743 287 6 0.6587302 43 3 0.593138 347 6 0.809210 304 6 0.772679 365 7 0.8876783 314 7 0.774059 140 7 0.950072 130 6 0.767850 226 7 0.848615 138 7 0.865066 69 5 0.8018943 415 6 0.8172494 111 6 0.838877 119 7 0.720351 283 7 0.8936744 498 7 0.794253 565 7 0.869824 401 7 0.6994811 278 7 0.8202846 159 6 0.8105462 301 6 0.799851 42 5 0.786395 181 5 0.8208548 369 6 0.940124 215 6 0.9424336 237 6 0.9518098 191 6 0.8509713 208 6 0.915464 211 6 0.8638041 0.824938 0.8412829 0.930447 0.7745277 0.919717 0.738051 0.8767428 0.8350252 0.8128340 0.8382000 0.736097 0.9390522 0.864242 0.9160729 0.6431566 0.640073 0.909005 0.8638293 0.9088077 0.876753 0.915901 0.877177 0.7954346 0.8820305 0.9449606 0.763973 0.879838 0.870087 0.9049525 0.9145847 0.8625857 0.8020755 0.82612059 0.67872760 0.89227955 0.799352 0.9463420 0.9291963 0.917746 0.9484978 0.8410905 0.9093070 6 0.876374 0.8923027 -0.01866389 7 0.7491580 0.7695210 -0.02036309 0.9930169 1.6847e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9827580 5.8478e-02 insignificant 1.00000 9.1315e-01 insignificant -0.03978185 0.1594709 insignificant 1.00000 insignificant 0.876374 0.8661654 -1.1921e-03 7 0.7491580 0.7605309 -0.01137295 8.5604e-01 4.2560e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.8329e-01 3.1637e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00086844 9.7566e-01 insignificant 1.0000e+00 insignificant 0.877898 0.9048964 -0.02530043 6 0.8561805 0.9234566 -0.0672761 9.6407e-01 5.6475e-03 weaklyHypometh 1.0000e+00 1.5264e-01 insignificant 9.6439e-01 2.2543e-03 weaklyHypometh 1.0000e+00 1.3323e-01 insignificant -0.13146016 2.3899e-04 weaklyHypometh 1.6121e-02 weaklyHypometh 0.8923027 0.8661654 0.0234861 7 0.7695210 0.7605309 0.0089901 3.6884e-01 8.0496e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.6639e-01 8.2049e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03891340 1.5847e-01 insignificant 6.1864e-01 insignificant 0.8940376 0.9048964 -0.01466002 6 0.8794526 0.9234566 -0.04400399 9.3455e-01 5.7789e-02 insignificant 1.0000e+00 9.2915e-01 insignificant 9.6496e-01 2.8546e-02 weaklyHypometh 1.0000e+00 0.8155981 insignificant -9.1678e-02 4.0921e-03 weaklyHypometh 0.17791680 insignificant 0.8681236 0.9048964 -0.0367742 6 0.8691782 0.9234566 -0.0542784 9.2376e-01 9.0369e-02 insignificant 1.0000e+00 3.4757e-01 insignificant 8.7994e-01 4.3190e-02 weaklyHypometh 1.0000e+00 2.3096e-01 insignificant -0.1305917 7.7914e-04 weaklyHypometh 1.4166e-02 weaklyHypometh chr17 1939350 1940350 49680 SMG6 ENSG00000070366 0.546547 155 4 0.490451 250 5 0.524444 84 5 0.669573 175 4 0.5650765 131 5 0.526440 227 4 0.599144 119 5 0.545023 136 5 0.5484127 107 5 0.585409 96 5 0.465224 253 4 0.605675 57 4 0.5067982 157 5 0.6634041 105 4 0.5765251 155 5 0.5601852 40 3 0.653670 118 2 0.574321 187 5 0.619883 287 4 0.5387124 179 4 0.680102 54 5 0.717619 56 4 0.632199 84 5 0.645866 83 4 0.640925 115 5 0.6625323 283 5 0.3709459 86 2 0.395238 49 4 0.552532 172 5 0.5142962 337 5 0.612554 451 5 0.703045 223 4 0.2373463 193 5 0.4196909 111 4 0.4321305 269 4 0.429870 46 2 0.285127 142 6 0.3569652 236 4 0.587766 158 4 0.7902932 121 4 0.5122452 275 4 0.8176850 142 4 0.526724 146 4 0.7477047 0.680310 0.7353504 0.751570 0.7453137 0.745326 0.698746 0.7776034 0.8341880 0.7975476 0.6981839 0.712719 0.6406613 0.804933 0.6648510 0.8504274 0.756078 0.681465 0.7792764 0.7948375 0.783150 0.680024 0.865903 0.8610313 0.7896778 0.8180174 0.642301 0.588425 0.750634 0.7372735 0.7116104 0.8193336 0.2923289 0.43846154 0.24814019 0.42081252 0.256765 0.5512911 0.6934100 0.759745 0.7426845 0.8497841 0.7903559 3 0.728628 0.7656799 -0.01379393 5 0.5651695 0.6246433 -0.05947378 0.6247742 3.0505e-01 insignificant 1.00000 1.0000e+00 insignificant 0.8227409 3.6494e-01 insignificant 1.00000 1.0000e+00 insignificant -0.02574186 0.4766124 lowCoverage 1.00000 lowCoverage 0.728780 0.3159478 3.9000e-01 5 0.5760311 0.3401642 0.23586697 2.0631e-20 8.6190e-01 hypermethylated 2.7879e-19 1.0000e+00 hypermethylated 6.6226e-07 6.1741e-01 hypermethylated 8.4905e-06 1.0000e+00 hypermethylated 0.20805767 9.3431e-04 lowCoverage 9.8349e-03 lowCoverage 0.728780 0.8349169 -0.03201518 4 0.5760311 0.5644204 0.0116108 7.4470e-01 1.9358e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 6.7051e-01 4.1104e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.07869670 2.9907e-01 lowCoverage 1.0000e+00 lowCoverage 0.7652086 0.3159478 0.4208913 5 0.5620839 0.3401642 0.2219197 5.1530e-13 6.7193e-01 hypermethylated 5.9230e-12 1.0000e+00 hypermethylated 1.4113e-04 6.8526e-01 hypermethylated 1.2715e-03 1.0000e+00 hypermethylated 0.23379953 2.3783e-04 lowCoverage 3.3842e-03 lowCoverage 0.7652086 0.8349169 -0.01886294 4 0.5620839 0.5644204 -0.00233650 8.1081e-01 5.1719e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 6.9892e-01 5.6043e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage -5.2955e-02 4.9672e-01 lowCoverage 1.00000000 lowCoverage 0.3159478 0.8349169 -0.5153725 4 0.3401642 0.5644204 -0.2242562 9.1629e-01 1.1749e-08 lowCoverage 1.0000e+00 1.4873e-07 lowCoverage 8.6171e-01 2.6630e-04 lowCoverage 1.0000e+00 3.1329e-03 lowCoverage -0.2867544 7.8900e-03 lowCoverage 6.3629e-02 lowCoverage chr17 2208750 2209750 49690 SGSM2 ENSG00000141258 0.832672 91 5 0.526667 65 5 0.506692 74 5 0.759702 96 6 0.2000000 11 0 0.912653 97 6 0.868333 28 4 0.664286 49 5 0.8683333 22 2 0.793333 15 1 0.864026 144 5 0.480000 9 1 0.6740327 112 5 NA 0 0 0.6523810 29 4 0.5833333 6 0 0.610000 20 1 0.385714 69 5 0.862415 115 5 0.6777697 84 4 0.833333 39 4 0.615000 23 2 0.741429 81 4 0.740171 48 4 0.580000 54 5 0.6520408 83 6 0.5333333 28 4 0.260000 19 1 0.803846 45 4 0.5624831 94 5 0.793705 157 5 0.707642 104 5 0.2247222 79 5 0.0641497 129 5 0.3183673 90 7 0.050000 47 5 0.046667 46 4 0.0829426 119 7 0.404559 69 4 0.4227871 134 6 0.7923077 50 4 0.6045523 89 5 0.445196 120 5 0.8080529 0.574491 0.5337975 0.760827 0.2112676 0.842656 0.889085 0.6477197 0.8503521 0.7647887 0.8616469 0.540845 0.6684406 NA 0.6985245 0.5918870 0.728873 0.412140 0.8448189 0.7826859 0.848592 0.653169 0.867706 0.7490069 0.6032864 0.7781690 0.639437 0.342254 0.764626 0.7449500 0.7080387 0.7766892 0.2204812 0.06136175 0.25553320 0.04039042 0.053991 0.0283118 0.4724595 0.356079 0.6876872 0.7157085 0.5004772 0 0.737676 0.7493540 -0.01950994 5 0.7626429 0.6757282 0.08691470 0.1950557 6.0945e-01 insignificant 1.00000 1.0000e+00 insignificant 0.2952496 8.5555e-01 insignificant 1.00000 1.0000e+00 insignificant 0.01768177 0.7826308 lowCoverage 1.00000 lowCoverage 0.737676 0.1078431 6.3227e-01 5 0.7626429 0.1294902 0.63315264 3.8699e-31 1.0000e+00 hypermethylated 8.2339e-30 1.0000e+00 hypermethylated 2.4307e-10 1.0000e+00 hypermethylated 5.2842e-09 1.0000e+00 hypermethylated 0.53845560 5.0957e-07 lowCoverage 1.4155e-05 lowCoverage 0.737676 0.5194805 0.18464299 5 0.7626429 0.4572762 0.3053667 1.8332e-05 9.9999e-01 weaklyHypermeth 3.2735e-04 1.0000e+00 weaklyHypermeth 3.4659e-03 9.9896e-01 weaklyHypermeth 5.5901e-02 1.0000e+00 weaklyHypermeth 0.13571662 1.5688e-01 lowCoverage 9.3939e-01 lowCoverage 0.7493540 0.1078431 0.6469396 5 0.6757282 0.1294902 0.5462379 1.9594e-25 1.0000e+00 hypermethylated 4.0821e-24 1.0000e+00 hypermethylated 9.1179e-08 1.0000e+00 hypermethylated 1.6578e-06 1.0000e+00 hypermethylated 0.52077383 1.6438e-06 lowCoverage 4.3258e-05 lowCoverage 0.7493540 0.5194805 0.22460876 5 0.6757282 0.4572762 0.21845200 3.4800e-05 9.9490e-01 hypermethylated 6.4444e-04 1.0000e+00 hypermethylated 2.1796e-02 9.9590e-01 weaklyHypermeth 2.3952e-01 1.0000000 insignificant 1.1803e-01 2.1446e-01 lowCoverage 1.00000000 lowCoverage 0.1078431 0.5194805 -0.4082647 5 0.1294902 0.4572762 -0.3277859 1.0000e+00 2.1138e-09 hypomethylated 1.0000e+00 2.8956e-08 hypomethylated 9.9996e-01 4.5716e-05 hypomethylated 1.0000e+00 7.4944e-04 hypomethylated -0.4027390 2.4852e-03 lowCoverage 2.9943e-02 lowCoverage chr17 2208950 2209950 49691 SGSM2 ENSG00000141258 0.840043 144 9 0.597619 83 7 0.511332 121 9 0.776805 145 8 0.4285714 13 0 0.906250 157 8 0.871296 46 6 0.716248 75 7 0.8027778 41 4 0.829630 25 1 0.855385 213 9 0.637037 17 1 0.7261405 140 7 NA 0 0 0.6203704 52 6 0.7261905 15 0 0.783333 34 1 0.449471 105 9 0.870978 164 9 0.7580220 154 8 0.885185 59 8 0.614815 45 4 0.832269 149 8 0.598024 59 5 0.637500 86 7 0.7047003 144 8 0.5931217 51 7 0.446914 48 5 0.724359 65 6 0.6251380 157 7 0.803443 248 7 0.752954 138 7 0.3647687 123 9 0.0356387 160 8 0.3228571 118 9 0.110952 76 9 0.025926 62 6 0.1054466 157 9 0.394637 137 8 0.4432064 164 8 0.7201974 73 7 0.6259182 144 9 0.353555 172 7 0.8609363 0.631009 0.5431316 0.781892 0.4285714 0.853745 0.850765 0.7023903 0.7691327 0.8295918 0.8493734 0.575510 0.7207514 NA 0.6835520 0.7043263 0.803571 0.426992 0.8693513 0.8218082 0.857653 0.625000 0.878376 0.6376268 0.6475340 0.8048030 0.659329 0.505329 0.691719 0.7780513 0.7400619 0.8019324 0.3040513 0.04445596 0.18513120 0.09814000 0.039116 0.0699208 0.4610407 0.393544 0.7036645 0.7767653 0.4001602 0 0.757454 0.7772436 -0.02016036 7 0.7673519 0.7229794 0.04437249 0.4244504 4.8714e-01 insignificant 1.00000 1.0000e+00 insignificant 0.1932239 9.5999e-01 insignificant 1.00000 1.0000e+00 insignificant 0.03657888 0.4572238 insignificant 1.00000 insignificant 0.757454 0.1336207 6.1803e-01 7 0.7673519 0.1704445 0.59690733 1.6445e-47 1.0000e+00 hypermethylated 6.3252e-46 1.0000e+00 hypermethylated 2.0706e-16 1.0000e+00 hypermethylated 1.3804e-14 1.0000e+00 hypermethylated 0.56051577 2.9157e-05 hypermethylated 5.5014e-04 hypermethylated 0.757454 0.4898551 0.24357244 7 0.7673519 0.4437978 0.3235541 9.4856e-13 1.0000e+00 hypermethylated 5.5798e-11 1.0000e+00 hypermethylated 8.9615e-07 1.0000e+00 hypermethylated 4.4807e-05 1.0000e+00 hypermethylated 0.21394467 3.4312e-02 weaklyHypermeth 4.1917e-01 insignificant 0.7772436 0.1336207 0.6365265 7 0.7229794 0.1704445 0.5525348 3.1273e-38 1.0000e+00 hypermethylated 1.3030e-36 1.0000e+00 hypermethylated 3.4557e-12 1.0000e+00 hypermethylated 1.4399e-10 1.0000e+00 hypermethylated 0.52393689 4.4200e-05 hypermethylated 7.6206e-04 hypermethylated 0.7772436 0.4898551 0.27660543 7 0.7229794 0.4437978 0.27918163 1.7680e-10 9.9999e-01 hypermethylated 1.1787e-08 1.0000e+00 hypermethylated 2.4903e-04 9.9998e-01 hypermethylated 7.5464e-03 1.0000000 hypermethylated 1.7737e-01 6.5090e-02 insignificant 0.69436945 insignificant 0.1336207 0.4898551 -0.3582579 7 0.1704445 0.4437978 -0.2733532 1.0000e+00 7.2549e-10 hypomethylated 1.0000e+00 1.1161e-08 hypomethylated 1.0000e+00 3.1588e-06 hypomethylated 1.0000e+00 7.5209e-05 hypomethylated -0.3465711 5.2468e-03 weaklyHypometh 4.8135e-02 weaklyHypometh chr17 2648650 2649650 49704 RAP1GAP2 ENSG00000132359 0.660714 32 4 0.378683 97 6 0.416667 32 6 0.446970 62 6 0.5471814 53 6 0.625397 65 5 0.548302 120 6 0.717885 91 6 0.5803571 26 2 0.583333 24 4 0.671819 159 6 1.000000 9 0 0.1000000 19 3 0.8333333 10 0 0.2000000 30 6 0.0000000 2 0 NA 0 0 0.200000 15 0 0.544444 32 6 0.5972222 17 0 0.735119 43 6 1.000000 4 0 0.760920 86 6 0.280000 24 3 0.807329 108 4 0.6877941 101 6 0.8250000 25 2 0.000000 3 0 0.500000 15 0 0.5570941 132 6 0.486070 162 6 0.777778 70 6 0.4424603 76 6 0.8309885 65 6 0.1666667 138 6 0.500000 4 0 0.568214 105 6 0.3789838 175 6 0.773810 39 6 0.5444444 58 6 0.1256410 75 6 0.3750000 8 0 0.397436 78 6 0.6029412 0.282805 0.2960784 0.413369 0.5889706 0.490196 0.530773 0.6832713 0.6386555 0.5529412 0.6213871 0.958114 0.1663451 0.980392 0.1647059 NA NA 0.058824 0.4254902 0.4460784 0.780462 NA 0.747645 0.2013560 0.7323906 0.6504966 0.858824 0.235380 0.421569 0.4527618 0.4131586 0.7019608 0.2948179 0.86370003 0.05882353 0.62637734 0.453711 0.2774070 0.7997199 0.498039 0.0352941 0.4877828 0.3891403 0 0.562011 0.6468305 -0.10202719 6 0.5371518 0.6477661 -0.11061424 0.9993122 5.4583e-04 weaklyHypometh 1.00000 4.1987e-02 weaklyHypometh 0.9996213 5.7856e-03 weaklyHypometh 1.00000 3.2142e-01 insignificant -0.11007580 0.2708574 lowCoverage 1.00000 lowCoverage 0.562011 0.4120782 1.0114e-01 6 0.5371518 0.4450413 0.09211054 4.6774e-03 4.5010e-01 weaklyHypermeth 2.0249e-02 1.0000e+00 weaklyHypermeth 3.1736e-01 7.9701e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02679734 8.0652e-01 lowCoverage 1.0000e+00 lowCoverage 0.562011 0.3875969 0.13435611 6 0.5371518 0.4055489 0.1316029 4.7284e-03 9.9343e-01 weaklyHypermeth 5.4349e-02 1.0000e+00 weaklyHypermeth 1.7995e-01 9.5415e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.06475008 6.1028e-01 lowCoverage 1.0000e+00 lowCoverage 0.6468305 0.4120782 0.2038306 6 0.6477661 0.4450413 0.2027248 1.3154e-04 9.9128e-01 hypermethylated 7.4314e-04 1.0000e+00 hypermethylated 1.8019e-02 9.8565e-01 weaklyHypermeth 9.2880e-02 1.0000e+00 weaklyHypermeth 0.13687314 2.7331e-01 lowCoverage 9.3601e-01 lowCoverage 0.6468305 0.3875969 0.24501156 6 0.6477661 0.4055489 0.24221715 6.9104e-06 1.0000e+00 hypermethylated 1.4703e-04 1.0000e+00 hypermethylated 7.4926e-03 9.9865e-01 weaklyHypermeth 1.1352e-01 1.0000000 insignificant 1.7483e-01 2.2112e-01 lowCoverage 1.00000000 lowCoverage 0.4120782 0.3875969 0.0425709 6 0.4450413 0.4055489 0.0394924 2.2371e-01 6.6497e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.8108e-01 8.2865e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0379527 7.9186e-01 lowCoverage 1.0000e+00 lowCoverage chr17 2661650 2662650 49705 RAP1GAP2 ENSG00000132359 0.774560 90 5 0.731793 167 5 0.391404 94 5 0.389598 68 4 0.4388889 52 3 0.623696 104 5 0.468817 62 3 0.619262 149 5 0.5020535 108 5 0.574596 66 5 0.757242 134 5 0.346072 70 4 0.4953381 202 5 0.5350000 26 2 0.4516306 76 5 0.4542857 30 2 0.587037 73 2 0.443001 134 4 0.614056 153 5 0.7262396 95 5 0.744286 57 5 0.309885 82 5 0.729282 67 5 0.383333 37 3 0.552614 76 4 0.6693651 213 5 0.6104261 75 5 0.540741 42 3 0.668458 124 5 0.6270026 210 4 0.711214 287 5 0.818927 161 5 0.3650841 223 5 0.2621951 60 3 0.2916667 67 3 0.336667 44 3 0.164583 71 4 0.3942994 212 5 0.262664 75 4 0.3107560 114 4 0.2075415 50 5 0.1510101 96 5 0.307451 61 5 0.7372550 0.600439 0.4025668 0.459654 0.5888889 0.494231 0.560408 0.5708586 0.4509052 0.5072692 0.6927528 0.342517 0.3671951 0.515335 0.4175812 0.5200244 0.403371 0.259079 0.5258297 0.6194308 0.608120 0.171530 0.669842 0.5192308 0.3758145 0.6187559 0.546344 0.552491 0.585711 0.5984988 0.5485862 0.7534076 0.2132227 0.27366714 0.08548677 0.20299145 0.168714 0.2216039 0.1396955 0.221442 0.1731317 0.1377622 0.1803251 1 0.537634 0.6408106 -0.08587108 5 0.5410934 0.6522732 -0.11117980 0.9756835 1.2106e-02 weaklyHypometh 1.00000 2.8824e-01 insignificant 0.9910273 2.7604e-01 insignificant 1.00000 1.0000e+00 insignificant -0.06756590 0.2062939 lowCoverage 1.00000 lowCoverage 0.538660 0.2067947 3.1783e-01 5 0.5848035 0.3424750 0.24232857 4.0466e-11 9.5114e-01 hypermethylated 3.5496e-10 1.0000e+00 hypermethylated 8.3758e-07 9.7004e-01 hypermethylated 1.0470e-05 1.0000e+00 hypermethylated 0.24381264 1.0125e-04 lowCoverage 1.5112e-03 lowCoverage 0.537673 0.2247475 0.34444066 5 0.5479423 0.2027092 0.3452331 4.8449e-13 1.0000e+00 hypermethylated 3.0280e-11 1.0000e+00 hypermethylated 2.2643e-08 1.0000e+00 hypermethylated 2.8304e-06 1.0000e+00 hypermethylated 0.29834402 1.1146e-05 lowCoverage 2.2291e-03 lowCoverage 0.6411517 0.2067947 0.4136233 5 0.6631825 0.3424750 0.3207076 8.3775e-12 9.9823e-01 hypermethylated 8.8184e-11 1.0000e+00 hypermethylated 1.4066e-05 9.9250e-01 hypermethylated 1.5457e-04 1.0000e+00 hypermethylated 0.31137854 3.5703e-05 lowCoverage 6.3754e-04 lowCoverage 0.6400560 0.2247475 0.43563686 5 0.5943188 0.2027092 0.39160954 6.2168e-16 9.9998e-01 hypermethylated 8.8812e-14 1.0000e+00 hypermethylated 9.1467e-07 1.0000e+00 hypermethylated 8.3151e-05 1.0000000 hypermethylated 3.6591e-01 5.3798e-06 lowCoverage 0.00179326 lowCoverage 0.2067947 0.2287918 0.0611191 5 0.3424750 0.2432511 0.0992239 3.1899e-03 3.2746e-01 weaklyHypermeth 7.7802e-02 1.0000e+00 weaklyHypermeth 6.0251e-02 3.8292e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0545314 2.6228e-01 lowCoverage 9.0129e-01 lowCoverage chr17 2662150 2663150 49706 RAP1GAP2 ENSG00000132359 0.621291 141 7 0.641067 219 7 0.582745 109 7 0.670088 131 7 0.5611111 84 6 0.530397 167 7 0.646117 95 6 0.680244 157 7 0.5261613 101 5 0.537694 63 3 0.684829 192 7 0.616803 75 3 0.5297738 172 7 0.5260417 40 4 0.5430014 92 7 0.7006803 43 4 0.233796 71 2 0.516289 154 5 0.591846 151 6 0.7218194 108 6 0.660204 52 4 0.640394 47 3 0.686964 85 6 0.535714 60 6 0.641334 88 5 0.6046554 205 7 0.6449755 76 6 0.638272 49 3 0.668162 149 6 0.4783565 200 7 0.660119 290 7 0.783007 169 7 0.4217168 220 7 0.6450639 87 6 0.4694444 89 6 0.621429 49 3 0.363152 95 7 0.4869156 225 7 0.470786 149 6 0.5025870 163 6 0.5042239 112 7 0.4141525 116 5 0.517227 119 7 0.6991801 0.578636 0.4886562 0.569178 0.6528777 0.508034 0.625188 0.5976051 0.5133967 0.5523674 0.6535446 0.450129 0.4085437 0.551277 0.5053661 0.6389174 0.347414 0.311832 0.5643055 0.6027166 0.565827 0.388985 0.657863 0.5245803 0.4444300 0.5755795 0.570213 0.593525 0.582481 0.5407692 0.5666351 0.7221169 0.2983999 0.44811370 0.22123706 0.39028777 0.235155 0.3025392 0.2625955 0.325525 0.3470381 0.3554309 0.3094583 1 0.561760 0.6006803 -0.04527409 6 0.5528586 0.6470341 -0.09417552 0.9143457 1.4636e-01 insignificant 1.00000 9.9691e-01 insignificant 0.9793003 6.0688e-01 insignificant 1.00000 1.0000e+00 insignificant -0.05375662 0.1053261 insignificant 1.00000 insignificant 0.563784 0.3424837 2.1048e-01 7 0.6254013 0.4670536 0.15834772 3.7962e-09 9.9925e-01 hypermethylated 2.8543e-08 1.0000e+00 hypermethylated 2.3319e-05 9.9376e-01 hypermethylated 2.1592e-04 1.0000e+00 hypermethylated 0.08180287 1.4888e-01 insignificant 6.3085e-01 insignificant 0.562846 0.4871017 0.17376262 7 0.5926807 0.4327617 0.1599190 5.0287e-07 5.3977e-01 weaklyHypermeth 1.1429e-05 1.0000e+00 weaklyHypermeth 7.1117e-05 7.8278e-01 weaklyHypermeth 1.9221e-03 1.0000e+00 weaklyHypermeth 0.10129443 3.4937e-03 weaklyHypermeth 9.9819e-02 weaklyHypermeth 0.6020619 0.3424837 0.2657690 6 0.6449156 0.4670536 0.1778620 8.3350e-10 9.9778e-01 hypermethylated 7.1854e-09 1.0000e+00 hypermethylated 3.4316e-04 9.6182e-01 hypermethylated 2.7899e-03 1.0000e+00 hypermethylated 0.13555949 2.9373e-02 weaklyHypermeth 1.7334e-01 insignificant 0.6010966 0.4871017 0.23735900 6 0.5955511 0.4327617 0.16278946 4.0189e-08 7.5536e-01 hypermethylated 1.4885e-06 1.0000e+00 hypermethylated 3.3356e-03 7.8774e-01 weaklyHypermeth 5.9282e-02 1.0000000 weaklyHypermeth 1.5505e-01 1.0559e-04 weaklyHypermeth 0.01759887 weaklyHypermeth 0.3424837 0.4923313 -0.0055182 7 0.4670536 0.4945848 -0.0275312 5.4841e-01 1.4393e-02 weaklyHypometh 1.0000e+00 6.8865e-02 weaklyHypometh 7.4069e-01 8.3533e-02 insignificant 1.0000e+00 3.9276e-01 insignificant 0.0194916 7.0345e-01 insignificant 1.0000e+00 insignificant chr17 2740350 2741350 49708 RAP1GAP2 ENSG00000132359 0.819052 136 8 0.665705 122 6 0.707273 54 3 0.788619 110 8 0.8171118 127 7 0.677056 146 4 0.770383 92 8 0.814850 101 5 0.7840404 85 8 0.680628 82 5 0.917736 217 8 0.715848 76 6 0.7090078 155 8 0.8306341 127 8 0.7460227 128 8 0.6266234 55 5 0.784652 130 4 0.815464 120 9 0.761905 122 3 0.8966957 105 4 0.765432 46 3 0.812027 64 3 0.768481 150 8 0.675084 51 3 0.822857 59 2 0.9120416 139 8 0.8275202 56 4 0.921591 52 4 0.854675 127 8 0.8104706 106 4 0.837453 121 3 0.836590 100 4 0.8118907 159 8 0.6615226 64 4 0.6785714 52 3 0.555556 6 0 0.715887 102 8 0.8695652 89 4 0.821960 91 8 0.7819670 122 8 0.8438710 80 5 0.8835693 138 8 0.843949 129 8 0.8655441 0.728611 0.8167417 0.755315 0.7755181 0.781586 0.749368 0.8622795 0.6746675 0.7277978 0.8842667 0.714197 0.8330987 0.782342 0.6906691 0.5904590 0.721617 0.876594 0.7976728 0.8497844 0.883388 0.824182 0.782127 0.7710771 0.8576143 0.8764670 0.787927 0.789233 0.753728 0.8940580 0.8459233 0.8181186 0.7667376 0.64209754 0.76011687 0.72385565 0.748370 0.9188549 0.8380836 0.705054 0.7711594 0.8283720 0.8311200 1 0.790393 0.8207283 -0.01732815 4 0.7972840 0.8009564 -0.00367245 0.9260817 4.8418e-02 lowCoverage 1.00000 6.6593e-01 lowCoverage 0.9774687 1.8141e-03 lowCoverage 1.00000 1.6492e-01 lowCoverage -0.05388655 0.0441059 lowCoverage 1.00000 lowCoverage 0.792145 0.7838983 1.5360e-02 4 0.7976905 0.6918555 0.10583508 3.5147e-02 5.3079e-01 lowCoverage 1.3213e-01 1.0000e+00 lowCoverage 5.0840e-01 4.7370e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.05096661 3.3430e-01 lowCoverage 1.0000e+00 lowCoverage 0.790210 0.7892857 -0.02469837 8 0.7770124 0.8537368 -0.0767244 9.2739e-01 1.7544e-02 weaklyHypometh 1.0000e+00 3.2713e-01 insignificant 9.7473e-01 1.5235e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.06859802 1.2190e-02 weaklyHypometh 2.2163e-01 insignificant 0.8216319 0.7838983 0.0331824 4 0.8106928 0.6918555 0.1188373 1.7560e-01 9.7819e-01 lowCoverage 5.8533e-01 1.0000e+00 lowCoverage 8.4970e-02 9.9726e-01 lowCoverage 3.5702e-01 1.0000e+00 lowCoverage 0.10485317 7.3483e-02 lowCoverage 3.4178e-01 lowCoverage 0.8214286 0.7892857 0.01664338 4 0.8096235 0.8537368 -0.04411327 7.4815e-01 4.1674e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 2.6073e-01 8.4805e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage -1.4711e-02 5.6903e-01 lowCoverage 1.00000000 lowCoverage 0.7838983 0.7885305 -0.0297041 4 0.6918555 0.8374853 -0.1456299 9.2667e-01 4.4179e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.1007e-01 3.1281e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.1195646 4.7749e-02 lowCoverage 2.5534e-01 lowCoverage chr17 2806850 2807850 49710 RAP1GAP2 ENSG00000132359 0.740757 716 22 0.664975 580 22 0.737622 465 22 0.746607 629 22 0.6417857 223 18 0.701452 879 21 0.731346 350 22 0.694649 490 22 0.7019698 449 22 0.754055 390 22 0.735766 786 22 0.691198 226 21 0.7266647 591 22 0.7475403 94 9 0.7166059 349 22 0.7635236 173 16 0.701137 467 17 0.713164 632 22 0.683189 691 22 0.7452023 791 22 0.709645 206 17 0.739718 293 14 0.735354 617 22 0.725545 266 19 0.705866 320 19 0.6458451 733 22 0.7043554 358 20 0.693302 218 17 0.685203 430 22 0.6488621 749 22 0.705529 968 22 0.743784 980 22 0.6994624 458 22 0.7100178 490 22 0.6330586 497 18 0.795062 171 12 0.703329 374 22 0.7553983 809 22 0.710932 776 22 0.7711789 852 22 0.7514441 706 22 0.7281808 605 22 0.725277 668 19 0.7728196 0.682130 0.7432237 0.753584 0.7056441 0.751472 0.735983 0.6936872 0.7201976 0.7625986 0.7495056 0.740922 0.6987712 0.742648 0.7138399 0.7371892 0.683370 0.742371 0.6744367 0.7531964 0.730805 0.757260 0.744443 0.7012877 0.7829443 0.6788753 0.678505 0.709896 0.658662 0.7290641 0.7062577 0.7595913 0.7069114 0.69751347 0.69928293 0.73381250 0.711770 0.7648159 0.7516294 0.777147 0.7589411 0.7565264 0.7774987 16 0.738040 0.7473118 0.00894872 22 0.7537745 0.6385736 0.11520093 0.4355148 6.8505e-01 insignificant 1.00000 1.0000e+00 insignificant 0.3796352 7.6500e-01 insignificant 1.00000 1.0000e+00 insignificant 0.01337634 0.2623609 insignificant 1.00000 insignificant 0.737935 0.7609861 -1.3185e-02 22 0.7229964 0.6961583 0.02683808 3.5693e-03 2.3333e-04 weaklyHypometh 1.5793e-02 6.8628e-03 weaklyHypometh 1.3723e-01 1.6079e-04 weaklyHypometh 5.5531e-01 7.3086e-03 weaklyHypometh 0.00090574 9.7059e-01 insignificant 1.0000e+00 insignificant 0.738014 0.7596340 -0.02711936 22 0.7443043 0.7295820 0.0147223 9.9890e-01 7.5838e-02 insignificant 1.0000e+00 7.4351e-01 insignificant 9.9367e-01 5.1553e-02 insignificant 1.0000e+00 7.2610e-01 insignificant -0.02044219 1.4906e-01 insignificant 9.3492e-01 insignificant 0.7479211 0.7609861 -0.0191371 22 0.7183953 0.6961583 0.0222370 7.9198e-03 3.0514e-04 weaklyHypometh 3.3701e-02 1.1302e-02 weaklyHypometh 7.6990e-02 4.3207e-03 weaklyHypometh 3.3068e-01 1.8786e-01 insignificant -0.01247060 6.2411e-01 insignificant 1.0000e+00 insignificant 0.7474336 0.7596340 -0.03856916 22 0.6631341 0.7295820 -0.06644791 9.9778e-01 3.8255e-02 weaklyHypometh 1.0000e+00 7.7156e-01 insignificant 9.9952e-01 2.6617e-02 weaklyHypometh 1.0000e+00 0.8155981 insignificant -3.3819e-02 3.6966e-02 weaklyHypometh 0.47391960 insignificant 0.7609861 0.7597781 -0.0188534 22 0.6961583 0.7487139 -0.0525556 6.2117e-02 1.7570e-03 weaklyHypometh 9.7058e-01 1.0397e-02 weaklyHypometh 3.5401e-01 1.0799e-02 weaklyHypometh 1.0000e+00 7.1996e-02 weaklyHypometh -0.0213479 4.1892e-01 insignificant 1.0000e+00 insignificant chr17 2853950 2854950 49712 RAP1GAP2 ENSG00000132359 0.839139 282 8 0.817069 588 8 0.770765 449 8 0.906280 176 8 0.7518462 347 8 0.884986 400 8 0.786042 400 8 0.846881 317 7 0.8820278 277 8 0.851483 469 8 0.856037 491 8 0.754734 284 8 0.8261026 342 8 0.9241847 177 5 0.7591442 493 8 0.9121843 110 8 0.725333 63 4 0.411964 253 7 0.829276 805 8 0.8188352 287 7 0.757478 171 8 0.659348 141 5 0.843162 259 7 0.830665 108 8 0.800387 84 5 0.8909446 526 9 0.9052122 294 8 0.830669 193 7 0.902217 472 7 0.8463795 624 8 0.781649 917 9 0.953173 381 7 0.0066195 388 8 0.0833333 425 8 0.0013477 501 7 0.133333 44 4 0.201784 387 8 0.0740741 684 9 0.598862 271 8 0.5478784 217 7 0.8051768 106 5 0.7900782 137 7 0.429109 197 7 0.9052829 0.840515 0.7830343 0.917179 0.9228934 0.911104 0.885074 0.9389558 0.8908272 0.9669576 0.9209326 0.883407 0.9285465 0.915632 0.8918734 0.9337873 0.904076 0.461468 0.9282104 0.9354183 0.864033 0.700380 0.897494 0.9209253 0.7425872 0.9429957 0.869319 0.921462 0.929901 0.9396880 0.9329574 0.9463535 0.0076133 0.00000000 0.00163522 0.03422222 0.010449 0.0000000 0.6107868 0.618017 0.8465184 0.7960542 0.2967429 5 0.883024 0.9079137 -0.02642688 8 0.6875230 0.7861073 -0.09858434 0.9968887 1.2722e-01 insignificant 1.00000 9.3542e-01 insignificant 0.9845723 1.8688e-01 insignificant 1.00000 1.0000e+00 insignificant -0.02572473 0.4462940 insignificant 1.00000 insignificant 0.883024 0.0102923 8.7601e-01 8 0.6875230 0.2101331 0.47738991 1.0092e-107 8.0380e-01 hypermethylated 1.6819e-105 1.0000e+00 hypermethylated 5.0808e-19 8.0390e-01 hypermethylated 4.6189e-17 1.0000e+00 hypermethylated 0.72430035 4.8675e-10 hypermethylated 2.2125e-08 hypermethylated 0.883260 0.5991379 0.27853695 7 0.7229419 0.6418029 0.0811390 2.8445e-18 9.7930e-01 hypermethylated 3.1605e-16 1.0000e+00 hypermethylated 4.0013e-08 9.7936e-01 hypermethylated 4.0013e-06 1.0000e+00 hypermethylated 0.17349468 7.2398e-02 insignificant 6.3110e-01 insignificant 0.9079137 0.0102923 0.8979422 8 0.7861073 0.2101331 0.5759742 1.0421e-98 1.0000e+00 hypermethylated 3.4736e-96 1.0000e+00 hypermethylated 3.8093e-17 9.9969e-01 hypermethylated 3.4630e-15 1.0000e+00 hypermethylated 0.75002508 1.7504e-09 hypermethylated 1.5913e-07 hypermethylated 0.9081314 0.5991379 0.30463197 7 0.8647180 0.6418029 0.22291510 2.1160e-17 1.0000e+00 hypermethylated 4.2321e-15 1.0000e+00 hypermethylated 1.2817e-07 1.0000e+00 hypermethylated 1.4241e-05 1.0000000 hypermethylated 1.9922e-01 4.8223e-02 weaklyHypermeth 0.57408670 insignificant 0.0098847 0.5991379 -0.5859913 7 0.1311464 0.6418029 -0.5106566 9.9999e-01 2.5370e-25 hypomethylated 1.0000e+00 2.1142e-23 hypomethylated 9.9993e-01 2.4499e-11 hypomethylated 1.0000e+00 2.9348e-09 hypomethylated -0.5508057 6.2473e-04 hypomethylated 1.1787e-02 hypomethylated chr17 3509550 3510550 49714 CTNS ENSG00000040531 0.918118 466 12 0.771073 383 12 0.843394 502 12 0.933871 648 12 0.7943641 293 13 0.736350 764 12 0.809504 293 12 0.695336 587 12 0.7589786 524 12 0.780779 630 12 0.764362 511 12 0.798916 334 11 0.6288050 649 13 0.9070778 385 11 0.8156656 609 12 0.6851250 238 10 0.792045 62 5 0.636748 760 12 0.716455 511 12 0.6704221 537 12 0.738766 208 13 0.726400 324 11 0.785460 493 12 0.655882 207 10 0.850183 246 11 0.9349861 481 12 0.6508885 377 13 0.619409 236 12 0.747793 526 12 0.7228936 570 12 0.768648 756 12 0.642843 643 12 0.3446790 438 12 0.2228368 341 10 0.3321429 421 9 0.466394 116 9 0.260684 509 15 0.5585764 498 12 0.917581 536 12 0.8889102 565 13 0.8576633 467 12 0.7985557 445 12 0.858897 506 12 0.8881954 0.820385 0.8059341 0.910446 0.9048849 0.883853 0.924599 0.8345553 0.8626111 0.8859359 0.9272574 0.866982 0.8102632 0.869689 0.8607063 0.7875245 0.866289 0.748070 0.8623506 0.8789495 0.962647 0.859915 0.882737 0.8737368 0.8777612 0.9111420 0.865708 0.829828 0.895680 0.9072034 0.8861523 0.9028022 0.2233029 0.15706160 0.27522413 0.45669106 0.265085 0.4833154 0.9449998 0.887330 0.8932829 0.8302203 0.8854410 10 0.862172 0.8913473 -0.02440825 12 0.6589778 0.6435727 0.01540518 0.8313392 2.5865e-02 weaklyHypometh 1.00000 4.2881e-01 insignificant 0.9756956 9.1323e-02 insignificant 1.00000 9.7446e-01 insignificant 0.03585682 0.2862379 insignificant 1.00000 insignificant 0.862425 0.3199482 5.3174e-01 12 0.6757124 0.3042311 0.37148128 1.5015e-69 1.0000e+00 hypermethylated 1.5015e-67 1.0000e+00 hypermethylated 5.8428e-16 1.0000e+00 hypermethylated 3.4370e-14 1.0000e+00 hypermethylated 0.40865061 2.1992e-04 hypermethylated 2.8561e-03 hypermethylated 0.864470 0.8947995 -0.03200226 12 0.8058806 0.8599016 -0.0540210 9.9937e-01 5.0910e-03 weaklyHypometh 1.0000e+00 1.4973e-01 insignificant 9.9942e-01 2.2306e-02 weaklyHypometh 1.0000e+00 4.8649e-01 insignificant -0.09145205 5.8270e-03 weaklyHypometh 1.3874e-01 insignificant 0.8913732 0.3198276 0.5362892 12 0.6238465 0.3015195 0.3223270 2.9782e-56 1.0000e+00 hypermethylated 2.2909e-54 1.0000e+00 hypermethylated 1.3335e-12 1.0000e+00 hypermethylated 6.0614e-11 1.0000e+00 hypermethylated 0.37279380 2.4028e-04 hypermethylated 3.3842e-03 hypermethylated 0.8955640 0.8947995 -0.00404881 12 0.7629679 0.8599016 -0.09693371 9.3196e-01 3.5843e-02 weaklyHypometh 1.0000e+00 7.6261e-01 insignificant 9.5417e-01 9.5303e-02 insignificant 1.0000e+00 1.0000000 insignificant -1.2731e-01 1.6850e-03 weaklyHypometh 0.11573031 insignificant 0.3217240 0.8947577 -0.5652616 12 0.3586927 0.8505617 -0.4918690 1.0000e+00 4.2066e-34 hypomethylated 1.0000e+00 5.2582e-32 hypomethylated 1.0000e+00 7.5540e-11 hypomethylated 1.0000e+00 5.5511e-09 hypomethylated -0.5001027 7.1447e-05 hypomethylated 2.3047e-03 hypomethylated chr17 3737850 3738850 49716 C17orf85 ENSG00000074356 0.770722 97 6 0.580542 186 6 0.575115 214 6 0.784503 49 4 0.6630897 141 6 0.734972 205 6 0.651113 202 6 0.603154 195 6 0.6295572 157 6 0.668227 174 6 0.633381 193 6 0.593010 126 6 0.5399601 139 6 0.8500000 40 4 0.6702467 161 6 0.6149059 117 6 0.700268 76 3 0.656866 60 6 0.561374 215 6 0.6261141 175 6 0.846029 117 6 0.604076 55 4 0.703517 143 6 0.645449 134 6 0.628968 31 4 0.7480057 247 6 0.6080007 145 6 0.654733 106 6 0.552710 117 4 0.6678493 269 6 0.557707 340 6 0.741778 238 6 0.3187004 191 6 0.2733655 128 6 0.3555556 27 2 0.544444 35 3 0.272097 145 6 0.4354155 195 6 0.763283 75 3 0.7661083 101 3 0.5648148 49 3 0.4546296 101 3 0.690241 63 4 0.6444210 0.550655 0.5844368 0.647824 0.6893409 0.728492 0.644440 0.5557464 0.6048999 0.6445585 0.6675305 0.558714 0.4499470 0.650198 0.5909225 0.5306387 0.599085 0.632234 0.4807203 0.5629353 0.783420 0.613478 0.646522 0.6245867 0.6749035 0.7156098 0.575431 0.680886 0.528908 0.5997640 0.4700391 0.7384797 0.1868565 0.12535033 0.17193595 0.46270270 0.196367 0.2514959 0.6046982 0.713489 0.4963964 0.5749550 0.5920697 3 0.616016 0.6503605 -0.02851105 6 0.6313132 0.6607812 -0.02946803 0.9792449 1.4447e-01 insignificant 1.00000 9.9691e-01 insignificant 0.8507935 3.0783e-01 insignificant 1.00000 1.0000e+00 insignificant -0.00787933 0.7978630 insignificant 1.00000 insignificant 0.616016 0.2746186 3.4749e-01 6 0.6313132 0.3416717 0.28964150 4.2029e-24 6.9296e-01 hypermethylated 7.0049e-23 1.0000e+00 hypermethylated 1.4783e-08 5.2337e-01 hypermethylated 2.3844e-07 1.0000e+00 hypermethylated 0.28875962 5.2353e-04 lowCoverage 5.9520e-03 lowCoverage 0.616016 0.5732648 -0.02417814 3 0.6313132 0.6748750 -0.0435618 6.5435e-01 2.2364e-02 lowCoverage 1.0000e+00 3.6662e-01 lowCoverage 7.9026e-01 8.7145e-02 lowCoverage 1.0000e+00 9.4722e-01 lowCoverage 0.00754055 9.0984e-01 lowCoverage 1.0000e+00 lowCoverage 0.6503605 0.2746186 0.3767839 6 0.6607812 0.3416717 0.3191095 1.1220e-16 8.3820e-01 hypermethylated 1.5162e-15 1.0000e+00 hypermethylated 4.7503e-07 6.9863e-01 hypermethylated 6.8845e-06 1.0000e+00 hypermethylated 0.29663895 2.9014e-04 lowCoverage 3.8711e-03 lowCoverage 0.6503605 0.5732648 -0.00478240 3 0.6607812 0.6748750 -0.01409378 6.1181e-01 1.9291e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 6.5294e-01 1.7578e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 1.5420e-02 8.2222e-01 lowCoverage 1.00000000 lowCoverage 0.2746186 0.5732648 -0.4341299 3 0.3416717 0.6748750 -0.3332033 9.9946e-01 7.8155e-11 lowCoverage 1.0000e+00 1.4210e-09 lowCoverage 9.9929e-01 5.1460e-04 lowCoverage 1.0000e+00 5.8477e-03 lowCoverage -0.2812191 6.0081e-03 lowCoverage 5.1794e-02 lowCoverage chr17 3737950 3738950 49717 C17orf85 ENSG00000074356 0.770722 97 6 0.580542 186 6 0.575115 214 6 0.784503 49 4 0.6630897 141 6 0.734972 205 6 0.651113 202 6 0.603154 195 6 0.6295572 157 6 0.668227 174 6 0.633381 193 6 0.593010 126 6 0.5399601 139 6 0.8500000 40 4 0.6702467 161 6 0.6149059 117 6 0.700268 76 3 0.656866 60 6 0.561374 215 6 0.6261141 175 6 0.846029 117 6 0.604076 55 4 0.703517 143 6 0.645449 134 6 0.628968 31 4 0.7480057 247 6 0.6080007 145 6 0.654733 106 6 0.552710 117 4 0.6678493 269 6 0.557707 340 6 0.741778 238 6 0.3187004 191 6 0.2733655 128 6 0.3555556 27 2 0.544444 35 3 0.272097 145 6 0.4354155 195 6 0.763283 75 3 0.7661083 101 3 0.5648148 49 3 0.4546296 101 3 0.690241 63 4 0.6444210 0.550655 0.5844368 0.647824 0.6893409 0.728492 0.644440 0.5557464 0.6048999 0.6445585 0.6675305 0.558714 0.4499470 0.650198 0.5909225 0.5306387 0.599085 0.632234 0.4807203 0.5629353 0.783420 0.613478 0.646522 0.6245867 0.6749035 0.7156098 0.575431 0.680886 0.528908 0.5997640 0.4700391 0.7384797 0.1868565 0.12535033 0.17193595 0.46270270 0.196367 0.2514959 0.6046982 0.713489 0.4963964 0.5749550 0.5920697 3 0.616016 0.6503605 -0.02851105 6 0.6313132 0.6607812 -0.02946803 0.9792449 1.4447e-01 insignificant 1.00000 9.9691e-01 insignificant 0.8507935 3.0783e-01 insignificant 1.00000 1.0000e+00 insignificant -0.00787933 0.7978630 insignificant 1.00000 insignificant 0.616016 0.2746186 3.4749e-01 6 0.6313132 0.3416717 0.28964150 4.2029e-24 6.9296e-01 hypermethylated 7.0049e-23 1.0000e+00 hypermethylated 1.4783e-08 5.2337e-01 hypermethylated 2.3844e-07 1.0000e+00 hypermethylated 0.28875962 5.2353e-04 lowCoverage 5.9520e-03 lowCoverage 0.616016 0.5732648 -0.02417814 3 0.6313132 0.6748750 -0.0435618 6.5435e-01 2.2364e-02 lowCoverage 1.0000e+00 3.6662e-01 lowCoverage 7.9026e-01 8.7145e-02 lowCoverage 1.0000e+00 9.4722e-01 lowCoverage 0.00754055 9.0984e-01 lowCoverage 1.0000e+00 lowCoverage 0.6503605 0.2746186 0.3767839 6 0.6607812 0.3416717 0.3191095 1.1220e-16 8.3820e-01 hypermethylated 1.5162e-15 1.0000e+00 hypermethylated 4.7503e-07 6.9863e-01 hypermethylated 6.8845e-06 1.0000e+00 hypermethylated 0.29663895 2.9014e-04 lowCoverage 3.8711e-03 lowCoverage 0.6503605 0.5732648 -0.00478240 3 0.6607812 0.6748750 -0.01409378 6.1181e-01 1.9291e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 6.5294e-01 1.7578e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 1.5420e-02 8.2222e-01 lowCoverage 1.00000000 lowCoverage 0.2746186 0.5732648 -0.4341299 3 0.3416717 0.6748750 -0.3332033 9.9946e-01 7.8155e-11 lowCoverage 1.0000e+00 1.4210e-09 lowCoverage 9.9929e-01 5.1460e-04 lowCoverage 1.0000e+00 5.8477e-03 lowCoverage -0.2812191 6.0081e-03 lowCoverage 5.1794e-02 lowCoverage chr17 3781350 3782350 49720 P2RX1 ENSG00000108405 0.856793 375 13 0.740843 210 11 0.688561 185 13 0.843149 240 13 0.8330729 102 11 0.851746 410 13 0.820718 107 8 0.762337 176 10 0.5663651 132 11 0.815992 184 13 0.727040 443 13 0.767857 67 3 0.8516800 223 12 0.8666667 28 2 0.8242429 193 11 0.7475409 75 6 0.712196 87 6 0.755882 333 13 0.806558 224 13 0.7385025 367 13 0.759201 87 7 0.853386 157 12 0.743286 229 13 0.873485 88 7 0.851465 101 13 0.7389618 321 13 0.8295533 125 9 0.710836 47 4 0.686937 176 9 0.8308407 261 13 0.731950 291 12 0.824781 508 13 0.7126624 218 10 0.6785860 167 11 0.6527189 311 11 0.833876 81 6 0.797763 103 10 0.6720309 277 13 0.842160 297 11 0.8204018 360 12 0.7856007 315 13 0.8296879 208 11 0.879351 334 13 0.8690205 0.771532 0.7502648 0.826946 0.8202657 0.894182 0.820167 0.7638782 0.6833923 0.8660127 0.8030899 0.798906 0.8878403 0.856424 0.8525229 0.7727048 0.812450 0.816502 0.8095839 0.8274936 0.772250 0.845909 0.801039 0.8474611 0.8218882 0.8156697 0.832719 0.770472 0.779065 0.8436247 0.8186696 0.8144068 0.6805442 0.67048147 0.72511569 0.84431244 0.824030 0.7574417 0.8757097 0.883659 0.8395644 0.8251689 0.8752725 3 0.819034 0.8239230 0.00404335 13 0.7711637 0.7791882 -0.00802454 0.6684191 6.2502e-01 insignificant 1.00000 1.0000e+00 insignificant 0.6932695 2.4487e-01 insignificant 1.00000 1.0000e+00 insignificant -0.00733639 0.7691283 insignificant 1.00000 insignificant 0.819034 0.7554019 8.0831e-02 13 0.7711637 0.6951860 0.07597772 2.3881e-05 9.9900e-01 weaklyHypermeth 1.3267e-04 1.0000e+00 weaklyHypermeth 9.0391e-02 9.6129e-01 insignificant 3.7821e-01 1.0000e+00 insignificant 0.05428093 1.5283e-01 insignificant 6.3677e-01 insignificant 0.819034 0.8586526 -0.04115261 12 0.7711637 0.7693655 0.0017982 9.6684e-01 8.5130e-02 insignificant 1.0000e+00 7.9561e-01 insignificant 9.9771e-01 9.8853e-02 insignificant 1.0000e+00 9.5051e-01 insignificant -0.05255317 3.3649e-02 weaklyHypometh 4.1917e-01 insignificant 0.8239230 0.7554019 0.0765105 13 0.7791882 0.6951860 0.0840023 4.2982e-04 9.9997e-01 weaklyHypermeth 2.3360e-03 1.0000e+00 weaklyHypermeth 3.4486e-02 9.9670e-01 weaklyHypermeth 1.6580e-01 1.0000e+00 insignificant 0.06161732 1.1680e-01 insignificant 4.9699e-01 insignificant 0.8239230 0.8586526 -0.04682893 12 0.7791882 0.7693655 0.00982277 9.9975e-01 2.5416e-02 weaklyHypometh 1.0000e+00 6.0859e-01 insignificant 9.6777e-01 7.5920e-02 insignificant 1.0000e+00 1.0000000 insignificant -4.5217e-02 8.0293e-02 insignificant 0.75565076 insignificant 0.7554019 0.8586526 -0.1150539 12 0.6951860 0.7693655 -0.0741795 1.0000e+00 2.3588e-06 weaklyHypometh 1.0000e+00 2.2901e-05 weaklyHypometh 9.9979e-01 3.8526e-03 weaklyHypometh 1.0000e+00 3.1579e-02 weaklyHypometh -0.1068341 1.5309e-02 weaklyHypometh 1.0706e-01 insignificant chr17 3805450 3806450 49721 P2RX1 ENSG00000108405 0.486054 172 8 0.447906 317 8 0.460308 181 9 0.503209 199 8 0.5559433 128 8 0.725326 283 8 0.709900 160 8 0.748104 228 8 0.7064534 125 9 0.657196 121 8 0.684219 364 8 0.524967 55 2 0.6298515 173 8 0.5632112 127 7 0.6618518 186 8 0.7303030 51 3 0.666667 16 0 0.606165 193 10 0.753784 391 8 0.6297961 226 8 0.615633 122 6 0.551389 142 7 0.693679 180 10 0.640506 149 8 0.731106 177 7 0.5707283 384 12 0.7079533 254 8 0.640032 104 8 0.638752 246 8 0.6302655 353 11 0.704531 491 12 0.641090 245 8 0.6163127 167 8 0.7296268 129 8 0.5868113 354 7 0.500000 30 5 0.617741 214 9 0.6705278 355 8 0.517917 180 8 0.6510343 215 8 0.6665140 129 8 0.5503168 166 8 0.555500 204 8 0.7180986 0.648155 0.7420941 0.814658 0.6298922 0.867867 0.712595 0.7210508 0.7149409 0.8264941 0.7778385 0.642825 0.7009422 0.815943 0.7760839 0.6779757 0.759741 0.763700 0.8104218 0.7638018 0.701797 0.678921 0.720327 0.7539822 0.7416494 0.7655188 0.775332 0.735057 0.778259 0.7738651 0.8325145 0.7740674 0.6899821 0.75951937 0.50434243 0.58442659 0.740601 0.7698291 0.7348559 0.806224 0.7453170 0.7256774 0.7856662 3 0.727692 0.6891465 0.00073904 8 0.6004882 0.6240853 -0.02359710 0.4636634 1.8183e-01 insignificant 1.00000 1.0000e+00 insignificant 0.8544890 3.7345e-01 insignificant 1.00000 1.0000e+00 insignificant -0.02457803 0.3724704 insignificant 1.00000 insignificant 0.728459 0.7261809 -2.2164e-02 8 0.6137522 0.5893930 0.02435920 6.7712e-01 4.2623e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.0018e-01 7.5731e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00239071 9.5182e-01 insignificant 1.0000e+00 insignificant 0.728311 0.7102908 -0.01531701 8 0.5852714 0.6070545 -0.0217830 7.7137e-01 6.1294e-02 insignificant 1.0000e+00 6.5908e-01 insignificant 7.5564e-01 1.8528e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03430429 3.7715e-01 insignificant 1.0000e+00 insignificant 0.6911142 0.7261809 -0.0419541 8 0.6501010 0.5893930 0.0607080 1.6406e-01 1.5963e-01 insignificant 5.4868e-01 1.0000e+00 insignificant 1.9957e-01 7.8552e-01 insignificant 7.4745e-01 1.0000e+00 insignificant 0.02696874 4.6883e-01 insignificant 1.0000e+00 insignificant 0.6893272 0.7102908 -0.02089840 8 0.6038817 0.6070545 -0.00317282 2.8836e-01 5.2553e-02 insignificant 1.0000e+00 9.0608e-01 insignificant 3.8365e-01 2.8786e-01 insignificant 1.0000e+00 1.0000000 insignificant 5.8882e-02 1.2649e-01 insignificant 0.94393000 insignificant 0.7271268 0.7167043 0.0253241 8 0.6346454 0.6475248 -0.0128794 6.2777e-01 1.7703e-01 insignificant 1.0000e+00 6.4141e-01 insignificant 8.7910e-01 4.6671e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0319136 4.8041e-01 insignificant 1.0000e+00 insignificant chr17 3839550 3840550 49727 ATP2A3 ENSG00000074370 0.986111 106 6 0.776479 114 6 0.878894 49 4 0.977778 52 3 1.0000000 30 2 0.946676 136 6 0.887770 67 4 0.949495 75 6 0.9729167 64 4 0.935185 49 4 0.901416 203 6 0.872222 25 4 0.8468673 106 4 0.8333333 6 0 0.9648268 69 4 0.7314815 61 4 0.656313 31 4 0.843261 113 5 0.926225 165 6 0.8954179 181 6 0.914352 67 6 0.791667 13 0 0.793929 123 5 0.811111 64 4 1.000000 21 1 0.9409722 127 6 0.8430688 80 4 0.767614 34 4 0.907039 108 6 0.9442808 135 6 0.954153 176 6 0.934260 167 6 0.7541667 93 6 0.8621247 172 6 0.7638258 197 6 0.479167 11 0 0.662879 69 6 0.7861991 142 6 0.912879 62 6 0.9269048 128 6 0.7951389 58 3 1.0000000 46 5 0.948718 39 3 0.9865196 0.790031 0.8193240 0.998039 1.0000000 0.939665 0.890244 0.9196970 0.9613971 0.8872549 0.9120678 0.858169 0.9107306 0.930632 0.9306086 0.7908497 0.623440 0.821682 0.9325661 0.8946587 0.911356 0.911765 0.823794 0.6901961 1.0000000 0.9148284 0.860757 0.738625 0.865504 0.9409263 0.9389089 0.9183106 0.6605392 0.83454636 0.65006684 0.58225202 0.597928 0.7197232 0.8937166 0.911870 0.7882966 1.0000000 0.9272329 1 0.906949 0.8959641 0.00912795 6 0.9106656 0.9071691 0.00349650 0.5094854 6.1195e-01 insignificant 1.00000 1.0000e+00 insignificant 0.6533273 6.3498e-01 insignificant 1.00000 1.0000e+00 insignificant 0.00559625 0.8537358 lowCoverage 1.00000 lowCoverage 0.906949 0.6929825 1.8204e-01 6 0.9106656 0.7674824 0.14318321 1.5344e-10 4.0992e-01 weaklyHypermeth 1.2894e-09 1.0000e+00 weaklyHypermeth 1.1439e-04 6.0194e-01 weaklyHypermeth 9.2999e-04 1.0000e+00 weaklyHypermeth 0.17107322 2.3709e-02 lowCoverage 1.4818e-01 lowCoverage 0.906949 0.9309309 -0.01949332 6 0.9106656 0.9168046 -0.0061390 6.1085e-01 2.4871e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.5100e-01 1.6544e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02759459 5.0475e-01 lowCoverage 1.0000e+00 lowCoverage 0.8959641 0.6929825 0.1803913 6 0.9071691 0.7674824 0.1396867 8.6183e-07 7.7107e-01 weaklyHypermeth 6.1559e-06 1.0000e+00 weaklyHypermeth 9.4343e-04 7.2118e-01 weaklyHypermeth 6.6439e-03 1.0000e+00 weaklyHypermeth 0.16547696 2.7121e-02 lowCoverage 1.6537e-01 lowCoverage 0.8959641 0.9309309 -0.02567386 6 0.9071691 0.9168046 -0.00963550 7.7352e-01 3.5556e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6967e-01 1.3265e-01 insignificant 1.0000e+00 1.0000000 insignificant -3.3191e-02 4.3774e-01 lowCoverage 1.00000000 lowCoverage 0.6929825 0.9309309 -0.1309975 6 0.7674824 0.9168046 -0.1493222 8.3116e-01 1.2905e-02 weaklyHypometh 1.0000e+00 6.2926e-02 weaklyHypometh 9.5166e-01 4.4783e-02 weaklyHypometh 1.0000e+00 2.3821e-01 insignificant -0.1986678 1.4452e-02 lowCoverage 1.0296e-01 lowCoverage chr17 3950350 3951350 49730 ATP2A3 ENSG00000074370 0.777566 347 11 0.709788 251 11 0.714721 143 11 0.804774 251 11 0.6483824 127 10 0.724105 485 11 0.640761 154 11 0.708710 170 11 0.6395416 157 11 0.814046 140 11 0.775562 302 11 0.721863 127 7 0.6702422 219 11 0.7454545 42 5 0.6832263 230 11 0.7575397 158 11 0.402749 91 6 0.859276 173 11 0.733285 216 11 0.7814419 347 11 0.824962 68 6 0.837664 104 9 0.760755 263 11 0.878307 70 6 0.750000 101 10 0.7053195 233 11 0.7517744 92 5 0.836640 76 6 0.680810 150 11 0.7436461 274 11 0.720569 234 11 0.759548 475 11 0.7019841 186 10 0.5450913 134 11 0.6688841 273 11 0.926865 71 6 0.639809 142 11 0.6598497 240 11 0.830580 264 11 0.8062399 300 11 0.8805283 232 11 0.7674478 275 11 0.776977 270 11 0.7512920 0.726068 0.6503361 0.828001 0.6731483 0.760724 0.675848 0.7100401 0.6895173 0.8149734 0.7783224 0.682549 0.7738261 0.742669 0.7128064 0.7356843 0.547757 0.853667 0.7284046 0.8013285 0.802177 0.815007 0.775889 0.8626086 0.8317610 0.7910908 0.792921 0.863208 0.693306 0.7674704 0.7566597 0.7860843 0.6996206 0.62142338 0.70771892 0.90772868 0.656580 0.7039966 0.8374874 0.798162 0.8723255 0.8378458 0.7778123 6 0.732688 0.7738318 -0.03357887 11 0.7082503 0.7595536 -0.05130330 0.9863137 1.7809e-03 weaklyHypometh 1.00000 8.6260e-02 weaklyHypometh 0.9887854 3.2867e-03 weaklyHypometh 1.00000 2.6025e-01 insignificant -0.05518127 0.0530622 insignificant 1.00000 insignificant 0.732688 0.6778203 6.2645e-02 11 0.7082503 0.6354743 0.07277598 6.4737e-04 9.9686e-01 weaklyHypermeth 3.1734e-03 1.0000e+00 weaklyHypermeth 1.4655e-01 9.4896e-01 insignificant 5.8386e-01 1.0000e+00 insignificant 0.02523781 6.6712e-01 insignificant 1.0000e+00 insignificant 0.732688 0.8240119 -0.09039698 11 0.7082503 0.7534280 -0.0451777 9.9984e-01 1.7648e-05 weaklyHypometh 1.0000e+00 2.2060e-03 weaklyHypometh 9.9953e-01 1.0740e-04 weaklyHypometh 1.0000e+00 1.5436e-02 weaklyHypometh -0.09670298 5.3721e-03 weaklyHypometh 1.3103e-01 insignificant 0.7738318 0.6778203 0.0941420 11 0.7595536 0.6354743 0.1240793 1.2055e-06 1.0000e+00 weaklyHypermeth 8.3717e-06 1.0000e+00 weaklyHypermeth 2.4614e-03 9.9996e-01 weaklyHypermeth 1.5677e-02 1.0000e+00 weaklyHypermeth 0.08041908 1.9169e-01 insignificant 7.0736e-01 insignificant 0.7738318 0.8240119 -0.05099844 11 0.7595536 0.7534280 0.00612555 9.0486e-01 3.2823e-04 weaklyHypometh 1.0000e+00 2.8045e-02 weaklyHypometh 9.0362e-01 1.6884e-02 weaklyHypometh 1.0000e+00 0.6156969 insignificant -4.1522e-02 1.5193e-01 insignificant 1.00000000 insignificant 0.6778203 0.8240119 -0.1456775 11 0.6354743 0.7534280 -0.1179537 1.0000e+00 4.9156e-09 weaklyHypometh 1.0000e+00 6.4679e-08 weaklyHypometh 1.0000e+00 1.3460e-04 weaklyHypometh 1.0000e+00 1.7947e-03 weaklyHypometh -0.1219408 6.8494e-02 insignificant 3.3373e-01 insignificant chr17 4011750 4012750 49731 CYB5D2 ENSG00000167740 0.892438 127 5 0.691667 82 5 0.545584 58 5 0.814302 105 4 1.0000000 5 0 0.861925 120 5 0.690476 40 3 0.847155 66 5 0.7527473 51 5 0.816799 46 5 0.726911 162 5 0.817460 20 1 0.8626320 109 5 NA 0 0 0.7821429 51 5 0.7187500 31 1 0.393382 24 1 0.849458 186 5 0.795905 107 5 0.8515095 113 5 0.692460 56 5 0.778264 77 4 0.855462 52 4 0.750000 16 2 0.905833 56 4 0.8114213 96 5 0.7407018 57 4 0.750000 22 1 0.739836 74 5 0.8374145 106 5 0.845926 138 5 0.745145 220 5 0.6665935 78 5 0.8150794 56 5 0.7428571 155 5 0.888889 26 2 0.803175 35 4 0.8535281 89 5 0.614038 126 4 0.5943773 126 5 0.6106412 109 4 0.7498990 66 5 0.843068 123 4 0.8620126 0.759649 0.4857997 0.805258 0.9688099 0.781811 0.756057 0.7891224 0.7165992 0.7566138 0.8284317 0.814257 0.8445963 NA 0.7650376 0.8065428 0.534341 0.814214 0.8087886 0.8171960 0.807853 0.701707 0.807312 0.8232600 0.8915936 0.7576684 0.714097 0.842105 0.706149 0.8161346 0.8215475 0.8856154 0.7756667 0.71024784 0.83759398 0.92397661 0.684767 0.8448014 0.5802787 0.517537 0.5488095 0.7152224 0.8161540 0 0.817698 0.8226804 -0.01587353 5 0.7262216 0.6979050 0.02831660 0.7776823 4.6472e-01 insignificant 1.00000 1.0000e+00 insignificant 0.8473016 3.9622e-01 insignificant 1.00000 1.0000e+00 insignificant -0.01342937 0.7085521 lowCoverage 1.00000 lowCoverage 0.817698 0.8769932 -5.1538e-02 5 0.7262216 0.7287138 -0.00249217 8.8232e-01 1.9931e-02 weaklyHypometh 1.0000e+00 4.3328e-01 insignificant 8.5281e-01 8.0960e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02074427 6.4962e-01 lowCoverage 1.0000e+00 lowCoverage 0.817698 0.6363636 0.17484936 5 0.7262216 0.7228203 0.0034014 1.3705e-06 8.9975e-01 weaklyHypermeth 2.8553e-05 1.0000e+00 weaklyHypermeth 2.6799e-03 9.4562e-01 weaklyHypermeth 4.8460e-02 1.0000e+00 weaklyHypermeth 0.09187124 1.5282e-01 lowCoverage 9.3492e-01 lowCoverage 0.8226804 0.8769932 -0.0343337 5 0.6979050 0.7287138 -0.0308088 9.6924e-01 1.0531e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3233e-01 3.3450e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00731490 8.4932e-01 lowCoverage 1.0000e+00 lowCoverage 0.8226804 0.6363636 0.19052316 5 0.6979050 0.7228203 -0.02491523 2.3644e-06 9.9993e-01 weaklyHypermeth 5.9111e-05 1.0000e+00 weaklyHypermeth 7.2660e-04 9.4677e-01 weaklyHypermeth 1.7300e-02 1.0000000 weaklyHypermeth 1.0530e-01 9.8240e-02 lowCoverage 0.80537172 lowCoverage 0.8769932 0.6363636 0.2305761 5 0.7287138 0.7228203 0.0058935 5.8857e-05 1.0000e+00 hypermethylated 2.3543e-03 1.0000e+00 hypermethylated 1.1118e-02 9.8970e-01 weaklyHypermeth 2.9257e-01 1.0000e+00 insignificant 0.1126155 9.5969e-02 lowCoverage 4.2464e-01 lowCoverage chr17 4178750 4179750 49736 ENSG00000209516 0.837934 193 6 0.831301 77 5 0.687144 104 6 0.778857 173 6 0.7909722 60 6 0.895825 61 5 0.826687 44 3 0.659115 87 6 0.8712121 32 3 0.966667 17 2 0.821306 99 6 0.850000 19 2 0.8455882 61 3 0.8611111 34 3 0.8985746 64 3 0.6719577 29 2 0.500000 2 0 0.766154 182 6 0.691667 48 4 0.8559885 58 5 0.833333 16 1 1.000000 4 0 0.772893 128 6 0.511364 22 1 0.607415 66 2 0.8741342 62 6 0.8857143 39 6 0.888889 11 1 0.829793 75 3 0.8425926 61 6 0.757265 52 6 0.889370 62 6 0.7573529 69 3 0.8750000 56 5 0.8138889 77 6 0.833333 4 0 0.850000 47 3 0.8509804 57 5 0.700448 181 6 0.9175989 208 6 0.5765531 161 6 0.8477669 135 3 0.832680 179 6 0.8051128 0.832414 0.6930246 0.904425 0.7989198 0.809233 0.825132 0.8138231 0.8641975 0.9555556 0.7825600 0.809259 0.8296115 0.865432 0.8725634 0.6618166 0.595194 0.851975 0.6990741 0.8349206 0.756173 0.894854 0.857615 0.5925926 0.7118456 0.8485129 0.904762 0.864198 0.767053 0.7911523 0.7142450 0.7861151 0.7071351 0.76305556 0.77623457 0.88626543 0.803704 0.7993464 0.8561932 0.854528 0.8315416 0.8112518 0.8290573 0 0.805402 0.7943144 0.00655253 5 0.7542280 0.7997580 -0.04553006 0.5410059 9.5648e-02 insignificant 1.00000 8.3380e-01 insignificant 0.7566494 1.1421e-01 insignificant 1.00000 1.0000e+00 insignificant -0.01232718 0.7883439 lowCoverage 1.00000 lowCoverage 0.811874 0.7903226 3.0919e-02 5 0.8262824 0.8163714 0.00991109 1.2576e-01 4.1495e-01 insignificant 4.3069e-01 1.0000e+00 insignificant 3.4139e-01 3.7010e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03468960 2.4838e-01 lowCoverage 8.9991e-01 lowCoverage 0.805402 0.8379630 -0.02398298 5 0.7542280 0.8053993 -0.0511714 9.5173e-01 1.1121e-01 insignificant 1.0000e+00 9.1906e-01 insignificant 6.9698e-01 5.3852e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02039367 7.6685e-01 lowCoverage 1.0000e+00 lowCoverage 0.7962003 0.7903226 0.0215048 5 0.8345577 0.8163714 0.0181863 4.3374e-01 8.4041e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.2959e-01 8.2160e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02236242 6.0172e-01 lowCoverage 1.0000e+00 lowCoverage 0.7943144 0.8379630 -0.03065814 5 0.7997580 0.8053993 -0.00564131 8.5801e-01 3.2826e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.0487e-01 8.3917e-01 insignificant 1.0000e+00 1.0000000 insignificant 3.2721e-02 6.6212e-01 lowCoverage 1.00000000 lowCoverage 0.7903226 0.8429257 -0.0555567 6 0.8163714 0.8587724 -0.0424011 9.2422e-01 2.4752e-02 weaklyHypometh 1.0000e+00 1.1099e-01 insignificant 9.3171e-01 2.7079e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0550833 4.2548e-01 lowCoverage 1.0000e+00 lowCoverage chr17 4699450 4700450 49747 PLD2 ENSG00000129219 0.765526 103 9 0.578974 69 5 0.627350 34 2 0.848596 99 9 0.7555556 30 5 0.841046 255 9 0.887778 32 5 0.738763 77 9 0.8148148 47 5 0.779012 61 5 0.878175 151 6 0.883333 13 0 0.7552632 76 5 NA 0 0 0.7910053 77 5 0.6527778 20 1 0.833333 19 1 0.935185 84 8 0.830485 149 9 0.7590588 197 9 0.734993 70 5 0.824891 69 8 0.778749 125 9 0.619480 70 5 0.878968 66 9 0.7512899 172 9 0.7507937 56 6 0.888636 35 5 0.923111 53 5 0.7663144 177 9 0.729701 150 9 0.794829 318 9 0.6585185 108 9 0.7361111 83 9 0.5683365 159 9 0.746908 94 5 0.712654 74 5 0.7412404 123 9 0.834046 89 9 0.8517138 139 9 0.8699695 74 9 0.7642429 96 5 0.811953 102 9 0.9381363 0.837093 0.8970013 0.988452 0.9372881 0.932256 0.871349 0.8699292 0.9576271 0.9285311 0.8939871 0.857507 0.9443131 NA 0.9477401 0.9459746 0.839852 0.995056 0.9508995 0.8851499 0.825352 0.940595 0.843073 0.8011870 0.9677663 0.8527621 0.878814 0.867088 0.875450 0.8887342 0.8881102 0.8829363 0.9044256 0.97987288 0.63562642 0.88017220 0.787924 0.9261184 0.9215558 0.959845 0.9286203 0.9140204 0.9210966 1 0.839925 0.7766348 0.04186792 9 0.7755951 0.7417359 0.03385918 0.0059147 9.9909e-01 weaklyHypermeth 0.98579 1.0000e+00 insignificant 0.0757669 9.2958e-01 insignificant 1.00000 1.0000e+00 insignificant 0.00034659 0.9914456 insignificant 1.00000 insignificant 0.839925 0.7113885 9.0672e-02 9 0.7755951 0.6902272 0.08536796 1.6906e-05 9.9440e-01 weaklyHypermeth 9.5515e-05 1.0000e+00 weaklyHypermeth 4.8124e-02 9.4944e-01 weaklyHypermeth 2.2328e-01 1.0000e+00 insignificant 0.09319818 2.3174e-02 weaklyHypermeth 1.4687e-01 insignificant 0.840352 0.8660000 -0.01990289 9 0.8062168 0.8319703 -0.0257535 9.4289e-01 2.2788e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.4724e-01 3.0765e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03922531 1.8037e-01 insignificant 1.0000e+00 insignificant 0.7766348 0.7113885 0.0659377 9 0.7417359 0.6902272 0.0515088 8.5744e-04 6.7884e-01 weaklyHypermeth 4.3087e-03 1.0000e+00 weaklyHypermeth 4.6126e-02 7.4426e-01 weaklyHypermeth 2.1243e-01 1.0000e+00 insignificant 0.09285160 2.8157e-02 weaklyHypermeth 1.6860e-01 insignificant 0.7770419 0.8660000 -0.06294522 9 0.7685955 0.8319703 -0.06337482 9.9959e-01 7.1404e-03 weaklyHypometh 1.0000e+00 2.4622e-01 insignificant 9.9350e-01 1.7511e-01 insignificant 1.0000e+00 1.0000000 insignificant -3.9572e-02 2.1003e-01 insignificant 1.00000000 insignificant 0.7115987 0.8660000 -0.1138104 9 0.6928450 0.8319703 -0.1391253 9.8957e-01 9.5847e-05 weaklyHypometh 1.0000e+00 7.4300e-04 weaklyHypometh 9.8224e-01 2.1453e-02 weaklyHypometh 1.0000e+00 1.2846e-01 insignificant -0.1324235 4.1696e-03 weaklyHypometh 4.0482e-02 weaklyHypometh chr17 4777550 4778550 49750 GP1BA ENSG00000185245 0.933333 71 8 0.808890 125 8 0.768284 106 5 0.968750 115 8 0.7679378 186 8 0.905962 163 8 0.805470 203 8 0.787526 121 5 0.8017908 165 5 0.779018 153 5 0.895683 164 8 0.713221 174 8 0.7834945 151 5 0.9633333 48 5 0.9012515 146 8 0.7392401 121 8 0.667196 82 6 0.900032 80 8 0.906350 228 8 0.8638350 131 8 0.735979 53 6 0.857639 63 5 0.875650 101 8 0.536508 72 7 0.934343 73 8 0.8593750 105 3 0.4361154 83 6 0.625487 84 5 0.776366 103 5 0.8441597 138 5 0.917593 179 6 0.912674 185 8 0.7416667 125 7 0.9293597 93 5 0.7500000 120 3 0.624074 36 4 0.573915 93 7 0.5235009 112 5 0.808430 122 8 0.9573593 123 8 0.8758377 67 8 0.8870741 137 8 0.873019 117 8 0.9468954 0.825530 0.8452054 0.989379 0.9099808 0.901975 0.850376 0.9230146 0.8688501 0.8738620 0.9309945 0.838441 0.9288757 0.939142 0.9003088 0.8929879 0.779879 0.897906 0.9233057 0.8697283 0.907236 0.879630 0.883643 0.6556022 0.9691028 0.8952206 0.611397 0.811184 0.887499 0.8825150 0.9626634 0.9597971 0.7706699 0.95822924 0.87619048 0.82140523 0.756097 0.6446315 0.9326903 0.963333 0.9077186 0.9176656 0.9271365 3 0.883278 0.8708636 0.02079279 7 0.8228374 0.7452551 0.07758230 0.0336781 9.5804e-01 weaklyHypermeth 1.00000 1.0000e+00 insignificant 0.4255353 8.5174e-01 insignificant 1.00000 1.0000e+00 insignificant 0.05703907 0.2772709 insignificant 1.00000 insignificant 0.883278 0.8221071 8.1061e-02 5 0.8228374 0.6675281 0.15530931 1.3945e-07 9.2496e-01 weaklyHypermeth 9.4225e-07 1.0000e+00 weaklyHypermeth 6.3189e-03 7.7947e-01 weaklyHypermeth 3.6525e-02 1.0000e+00 weaklyHypermeth 0.14261036 6.4779e-02 insignificant 3.2552e-01 insignificant 0.883278 0.9081272 -0.03031822 8 0.8228374 0.8705047 -0.0476673 9.8762e-01 4.0148e-02 weaklyHypometh 1.0000e+00 5.1471e-01 insignificant 9.9450e-01 4.2211e-02 weaklyHypometh 1.0000e+00 6.6226e-01 insignificant -0.04731418 1.5116e-01 insignificant 9.3492e-01 insignificant 0.8708636 0.8221071 0.0638435 5 0.7452551 0.6675281 0.0777270 3.1321e-02 9.2443e-01 weaklyHypermeth 1.1955e-01 1.0000e+00 insignificant 2.5744e-01 9.1891e-01 insignificant 9.2938e-01 1.0000e+00 insignificant 0.08557129 2.8613e-01 insignificant 9.6870e-01 insignificant 0.8708636 0.9081272 -0.05893664 7 0.7452551 0.8705047 -0.12524960 9.9961e-01 3.0442e-02 weaklyHypometh 1.0000e+00 6.7121e-01 insignificant 9.9945e-01 8.6888e-02 insignificant 1.0000e+00 1.0000000 insignificant -1.0435e-01 6.5591e-02 insignificant 0.69436945 insignificant 0.8221071 0.9081272 -0.1073765 5 0.6675281 0.8705047 -0.2029766 9.9991e-01 3.6050e-04 weaklyHypometh 1.0000e+00 2.4891e-03 weaklyHypometh 9.9916e-01 1.3652e-02 weaklyHypometh 1.0000e+00 8.7511e-02 weaklyHypometh -0.1899245 2.4048e-02 weaklyHypometh 1.5221e-01 insignificant chr17 6076050 6077050 49756 ENSG00000206618 0.872289 198 4 0.651143 130 5 0.828346 122 5 0.873501 217 4 0.7472222 45 4 0.874000 265 4 0.763818 78 5 0.824786 85 5 0.5995370 91 4 0.728896 51 3 0.724333 149 6 0.898676 57 3 0.5097941 77 3 1.0000000 8 1 0.7458689 63 3 0.7127976 37 3 0.820554 50 3 0.485918 199 4 0.938419 73 4 0.9006509 180 5 0.705490 58 4 0.791196 99 3 0.856138 87 5 0.736578 88 5 0.842815 100 5 0.7819573 157 6 0.6626677 74 4 0.797980 41 3 0.624542 64 4 0.7320393 206 6 0.847611 222 9 0.851330 198 4 0.3170578 117 5 0.1673913 61 4 0.2511111 96 1 0.249545 44 4 0.509895 130 6 0.3789659 154 6 0.662385 217 4 0.7982866 243 4 0.5554022 244 5 0.7221257 174 3 0.849761 283 6 0.7543381 0.644296 0.6031534 0.798451 0.6409498 0.759225 0.721215 0.7026468 0.5974014 0.7821743 0.8182745 0.844862 0.3851282 0.832362 0.6440364 0.6095117 0.759544 0.599232 0.8310424 0.7075036 0.798684 0.716055 0.696461 0.8374754 0.5998760 0.5373502 0.439880 0.737634 0.593690 0.3893899 0.6761220 0.7524390 0.2052935 0.03569425 NA 0.24934018 0.257470 0.2850819 0.7305067 0.676571 0.6141028 0.6228685 0.6411629 3 0.733333 0.6898780 0.06652314 4 0.8381019 0.7318025 0.10629941 0.2654392 9.9993e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.3697521 9.9967e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.00583211 0.8786958 lowCoverage 1.00000 lowCoverage 0.733211 0.2840532 4.8605e-01 4 0.8219121 0.4097737 0.41213843 2.4081e-32 1.0000e+00 lowCoverage 5.2351e-31 1.0000e+00 lowCoverage 2.4774e-12 1.0000e+00 lowCoverage 7.5073e-11 1.0000e+00 lowCoverage 0.46269968 1.8490e-05 lowCoverage 3.6980e-04 lowCoverage 0.733211 0.6959518 0.03996506 4 0.8219121 0.7996734 0.0222387 3.8486e-01 9.8918e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 2.4027e-01 9.9832e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.05743535 3.6999e-01 lowCoverage 1.0000e+00 lowCoverage 0.6908699 0.2840532 0.4213082 5 0.8049828 0.4097737 0.3952091 6.1147e-26 1.0000e+00 hypermethylated 1.3897e-24 1.0000e+00 hypermethylated 2.6789e-14 1.0000e+00 hypermethylated 1.6743e-12 1.0000e+00 hypermethylated 0.45686757 5.5498e-05 lowCoverage 9.3825e-04 lowCoverage 0.6908699 0.6959518 -0.01984465 4 0.8049828 0.7996734 0.00530938 9.5552e-01 8.4647e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.2909e-01 9.7468e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 5.1603e-02 3.9723e-01 lowCoverage 1.00000000 lowCoverage 0.2840532 0.6959518 -0.4474608 4 0.4097737 0.7996734 -0.3898997 9.9998e-01 1.5856e-12 lowCoverage 1.0000e+00 3.5235e-11 lowCoverage 9.9997e-01 4.6603e-05 lowCoverage 1.0000e+00 7.5166e-04 lowCoverage -0.4052643 3.2899e-04 lowCoverage 8.0242e-03 lowCoverage chr17 6350550 6351550 49764 FAM64A ENSG00000129195 0.717424 101 5 0.700535 95 5 0.627137 65 5 0.750059 135 5 0.7428571 31 4 0.813327 212 6 0.481818 35 5 0.761149 134 5 0.5025641 22 1 0.700000 25 3 0.733744 144 5 0.516667 19 1 0.7942890 65 5 0.6355556 45 5 0.5972222 27 4 0.7333333 16 0 0.700000 11 0 0.743333 83 5 0.856481 56 5 0.5820224 100 5 0.675000 36 5 0.887093 64 5 0.794164 76 5 0.694444 53 5 0.815714 64 5 0.7146093 110 5 0.7356061 68 5 0.611111 26 3 0.735714 44 5 0.7239286 82 5 0.837654 61 5 0.617523 181 5 0.5878261 76 5 0.5371051 71 5 0.6547009 70 5 0.820000 16 1 0.582143 79 5 0.5506536 95 5 0.840067 85 5 0.7900276 112 5 0.8265029 105 5 0.9833333 18 1 0.844145 120 5 0.6881371 0.663909 0.7734557 0.765732 0.7759740 0.806013 0.533747 0.7922675 0.5473485 0.7346591 0.7435023 0.369318 0.7725683 0.664015 0.6416667 0.7689394 0.738636 0.775189 0.8475379 0.7320713 0.697159 0.889524 0.776426 0.6786616 0.8263799 0.7431728 0.707266 0.636364 0.689827 0.7430668 0.8247054 0.7661204 0.6102209 0.66295306 0.68482906 0.79659091 0.548214 0.6923797 0.8118113 0.772539 0.8433453 0.9753788 0.8298557 1 0.731175 0.7630058 -0.01886198 5 0.7318063 0.7528543 -0.02104791 0.8183239 2.5207e-01 insignificant 1.00000 1.0000e+00 insignificant 0.8097746 8.5505e-02 insignificant 1.00000 9.6074e-01 insignificant -0.05240427 0.1326490 lowCoverage 1.00000 lowCoverage 0.731175 0.6388206 1.0282e-01 5 0.7318063 0.5706855 0.16112083 2.9190e-05 9.9926e-01 weaklyHypermeth 1.6039e-04 1.0000e+00 weaklyHypermeth 1.4553e-02 9.4523e-01 weaklyHypermeth 7.8242e-02 1.0000e+00 weaklyHypermeth 0.06240454 2.3683e-01 lowCoverage 8.7389e-01 lowCoverage 0.731175 0.8022727 -0.07993558 5 0.7318063 0.8348271 -0.1030208 9.9872e-01 2.2837e-03 weaklyHypometh 1.0000e+00 8.7835e-02 weaklyHypometh 9.9899e-01 1.0899e-04 weaklyHypometh 1.0000e+00 1.5436e-02 weaklyHypometh -0.17233920 2.3723e-03 lowCoverage 7.4133e-02 lowCoverage 0.7630058 0.6388206 0.1205904 5 0.7528543 0.5706855 0.1821687 2.6594e-05 1.0000e+00 weaklyHypermeth 1.5462e-04 1.0000e+00 weaklyHypermeth 2.5765e-03 9.9984e-01 weaklyHypermeth 1.6103e-02 1.0000e+00 weaklyHypermeth 0.11480882 4.7271e-02 lowCoverage 2.4719e-01 lowCoverage 0.7630058 0.8022727 -0.05989084 5 0.7528543 0.8348271 -0.08197285 9.9454e-01 4.3886e-03 weaklyHypometh 1.0000e+00 1.8165e-01 insignificant 9.9962e-01 1.0816e-03 weaklyHypometh 1.0000e+00 0.1352018 insignificant -1.1993e-01 1.7805e-02 lowCoverage 0.38888104 lowCoverage 0.6388206 0.8022727 -0.1825344 5 0.5706855 0.8348271 -0.2641416 1.0000e+00 1.1517e-06 weaklyHypometh 1.0000e+00 1.1873e-05 weaklyHypometh 1.0000e+00 1.8903e-05 weaklyHypometh 1.0000e+00 3.5006e-04 weaklyHypometh -0.2347437 1.9946e-03 lowCoverage 2.5572e-02 lowCoverage chr17 6419050 6420050 49768 PITPNM3 ENSG00000091622 0.862053 254 5 0.835505 247 5 0.809870 92 5 0.811846 263 5 0.7717195 84 5 0.923062 295 5 0.825734 74 5 0.829417 136 5 0.7781056 89 4 0.798077 63 2 0.867337 140 5 0.875000 22 2 0.4667261 68 2 0.9123636 56 2 0.9104013 82 2 0.8266667 31 1 0.833333 11 1 0.735023 209 5 0.813787 205 5 0.7250085 234 5 0.803571 45 5 0.694296 55 5 0.716993 129 5 0.780886 70 5 0.710975 218 4 0.8224496 147 5 0.9199507 64 5 0.647959 80 5 0.874237 122 5 0.8369859 215 5 0.757965 273 5 0.915257 215 5 0.1826267 192 5 0.0291209 138 5 1.0000000 93 5 0.266449 208 4 0.336886 134 5 0.0319269 260 5 0.767202 246 5 0.6774217 147 5 0.6980769 129 5 0.7573655 83 5 0.836300 161 5 0.8558383 0.754250 0.7791744 0.809622 0.7483091 0.885079 0.759823 0.8356715 0.7651324 0.8355996 0.8588685 0.697368 0.7792961 0.872766 0.8952024 0.5164912 0.874061 0.737846 0.8315260 0.8827121 0.897744 0.707965 0.798280 0.8782849 0.8408086 0.8091653 0.779492 0.938346 0.819915 0.8150974 0.7628061 0.9083171 0.1659487 0.02353962 1.00000000 0.12096090 0.454889 0.0311972 0.6966570 0.635864 0.6556005 0.7368474 0.8169536 2 0.815373 0.8216912 -0.00810165 5 0.8153663 0.6729037 0.14246259 0.8404700 6.8107e-01 insignificant 1.00000 1.0000e+00 insignificant 0.8837850 8.0343e-01 insignificant 1.00000 1.0000e+00 insignificant 0.02042455 0.5464185 lowCoverage 1.00000 lowCoverage 0.815402 0.2617188 5.6207e-01 5 0.7954884 0.2278894 0.56759895 2.7316e-25 1.0000e+00 hypermethylated 4.8779e-24 1.0000e+00 hypermethylated 7.0787e-07 1.0000e+00 hypermethylated 8.9603e-06 1.0000e+00 hypermethylated 0.50271682 1.8500e-02 lowCoverage 1.2091e-01 lowCoverage 0.815571 0.7506527 0.08528455 5 0.8212527 0.7491671 0.0720856 1.4254e-03 9.8196e-01 weaklyHypermeth 1.8274e-02 1.0000e+00 weaklyHypermeth 2.5964e-03 9.9795e-01 weaklyHypermeth 4.8082e-02 1.0000e+00 weaklyHypermeth 0.06327865 1.0619e-01 lowCoverage 7.7509e-01 lowCoverage 0.8225508 0.2617188 0.5723503 5 0.7722049 0.2278894 0.5443155 1.5771e-17 1.0000e+00 hypermethylated 2.2856e-16 1.0000e+00 hypermethylated 3.7890e-06 1.0000e+00 hypermethylated 4.7962e-05 1.0000e+00 hypermethylated 0.48229227 2.1452e-02 lowCoverage 1.3752e-01 lowCoverage 0.8233477 0.7506527 0.09255748 5 0.8266459 0.7491671 0.07747880 2.2532e-04 9.4969e-01 weaklyHypermeth 3.1198e-03 1.0000e+00 weaklyHypermeth 7.7049e-04 9.9399e-01 weaklyHypermeth 1.7511e-02 1.0000000 weaklyHypermeth 4.2854e-02 2.8217e-01 lowCoverage 1.00000000 lowCoverage 0.2622309 0.7506527 -0.4859912 5 0.2734673 0.7491671 -0.4756998 1.0000e+00 1.5803e-07 hypomethylated 1.0000e+00 1.8375e-06 hypomethylated 1.0000e+00 6.3901e-04 hypomethylated 1.0000e+00 6.9457e-03 hypomethylated -0.4394382 3.0020e-02 lowCoverage 1.7976e-01 lowCoverage chr17 7320550 7321550 49781 CHRNB1 ENSG00000170175 0.927716 233 7 0.812124 435 9 0.773599 126 8 0.931137 259 7 0.9163941 106 6 0.911010 408 9 0.932602 187 6 0.849806 150 8 0.8196338 139 9 0.886068 77 5 0.861278 395 9 0.873810 49 3 0.8358856 105 5 0.9614122 54 4 0.7993213 98 6 0.9861111 56 5 0.812500 10 0 0.892749 210 7 0.902868 345 8 0.9395336 312 9 0.848611 93 7 0.732550 39 3 0.871252 147 9 0.680142 89 5 0.879383 141 6 0.9308097 349 9 0.9091776 95 5 0.786217 54 3 0.854885 251 8 0.8772206 355 9 0.892864 573 9 0.745749 352 9 0.3325786 272 9 0.2462833 189 8 0.7170155 229 7 0.756789 184 6 0.423674 252 7 0.7424809 350 9 0.898131 254 8 0.8877044 257 8 0.9130212 163 7 0.8762121 153 4 0.892342 228 7 0.8905501 0.812979 0.6523540 0.896556 0.8765109 0.890039 0.924907 0.8278477 0.7936357 0.8470314 0.8846734 0.835395 0.6522197 0.927925 0.8250870 0.9873805 0.852811 0.819276 0.8415872 0.8798103 0.904679 0.703593 0.842644 0.7614987 0.7479739 0.8490941 0.790839 0.742047 0.822285 0.7928507 0.8559270 0.8449289 0.3050437 0.15933508 0.65389145 0.77134644 0.441197 0.7184916 0.8702927 0.842490 0.8972337 0.8310818 0.9311332 2 0.849720 0.8364210 0.01796136 9 0.8737727 0.8695299 0.00424280 0.5913284 8.3176e-01 insignificant 1.00000 1.0000e+00 insignificant 0.0290922 9.7638e-01 weaklyHypermeth 1.00000 1.0000e+00 insignificant 0.04720619 0.0892701 insignificant 1.00000 insignificant 0.849720 0.5169377 3.6179e-01 9 0.8737727 0.5128451 0.36092761 3.5667e-33 1.0000e+00 hypermethylated 8.1060e-32 1.0000e+00 hypermethylated 4.0304e-10 1.0000e+00 hypermethylated 8.2252e-09 1.0000e+00 hypermethylated 0.34480770 1.3722e-02 weaklyHypermeth 9.5957e-02 weaklyHypermeth 0.849720 0.8587678 -0.01890897 7 0.8737727 0.8826150 -0.0088424 2.1187e-01 1.3174e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.0146e-01 1.2062e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01220422 4.0877e-01 insignificant 1.0000e+00 insignificant 0.8364210 0.5169377 0.3182946 9 0.8695299 0.5128451 0.3566848 4.1541e-20 1.0000e+00 hypermethylated 7.0409e-19 1.0000e+00 hypermethylated 3.2265e-06 1.0000e+00 hypermethylated 4.1903e-05 1.0000e+00 hypermethylated 0.29760152 2.3282e-02 weaklyHypermeth 1.4643e-01 insignificant 0.8364210 0.8587678 -0.04032374 7 0.8695299 0.8826150 -0.01308516 3.7511e-01 2.8189e-02 weaklyHypometh 1.0000e+00 6.5555e-01 insignificant 5.0228e-01 1.0720e-03 weaklyHypometh 1.0000e+00 0.1352018 insignificant -5.9410e-02 2.6287e-02 weaklyHypometh 0.44452885 insignificant 0.5169377 0.8587678 -0.3927977 7 0.5128451 0.8826150 -0.3697700 1.0000e+00 5.1252e-11 hypomethylated 1.0000e+00 1.0049e-09 hypomethylated 1.0000e+00 6.0216e-07 hypomethylated 1.0000e+00 1.8083e-05 hypomethylated -0.3570119 1.2284e-02 weaklyHypometh 9.0123e-02 weaklyHypometh chr17 7489450 7490450 49783 SHBG ENSG00000129214 0.674457 216 5 0.630090 151 5 0.830339 82 5 0.571782 142 4 0.7753411 108 6 0.701620 206 5 0.644917 115 6 0.801661 66 4 0.7261905 83 6 0.750844 65 5 0.800528 146 5 0.705285 92 4 0.7335529 84 5 0.5000000 24 2 0.7518341 96 6 0.7263889 86 4 0.910417 107 4 0.752051 216 5 0.608494 143 5 0.6654182 159 5 0.602651 47 4 0.622222 21 2 0.732514 140 6 0.588294 65 5 0.759259 82 4 0.7164997 98 5 0.7846320 39 4 0.643421 51 4 0.753551 98 6 0.6725824 98 6 0.563054 145 5 0.753413 182 5 0.7037449 129 6 0.6615439 82 5 0.7268693 92 5 0.625000 6 0 0.534237 105 6 0.6896135 117 5 0.660593 130 4 0.7628568 138 4 0.6448338 134 5 0.8321603 131 5 0.750069 147 5 0.6123494 0.634071 0.8178741 0.642657 0.8028712 0.702574 0.716033 0.7139635 0.6721311 0.6540576 0.6985926 0.871938 0.6537537 0.692112 0.6981123 0.8353825 0.742764 0.594485 0.7023749 0.6295932 0.751396 0.411658 0.662118 0.7311996 0.7403157 0.6553718 0.649297 0.757362 0.653437 0.7491913 0.7459782 0.6628954 0.6160986 0.52207063 0.63844036 0.56750000 0.626590 0.6568563 0.6728045 0.545155 0.6956683 0.7047017 0.6701900 2 0.778802 0.7607880 0.00633210 5 0.6157823 0.6534388 -0.03765641 0.3542049 7.5241e-02 insignificant 1.00000 7.7486e-01 insignificant 0.6742746 3.0691e-01 insignificant 1.00000 1.0000e+00 insignificant 0.03038601 0.3294270 lowCoverage 1.00000 lowCoverage 0.778802 0.6704331 9.2358e-02 5 0.6157823 0.6452307 -0.02944831 1.3356e-04 8.2712e-01 weaklyHypermeth 6.9200e-04 1.0000e+00 weaklyHypermeth 7.1886e-02 9.6480e-01 insignificant 3.1529e-01 1.0000e+00 insignificant 0.05622566 1.4019e-01 lowCoverage 6.0426e-01 lowCoverage 0.779782 0.7705882 0.00471914 5 0.7037513 0.7468447 -0.0430935 6.3839e-01 1.3707e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.1650e-01 3.1774e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01704216 6.8638e-01 lowCoverage 1.0000e+00 lowCoverage 0.7607880 0.6704331 0.0835065 5 0.6534388 0.6452307 0.0082081 8.7786e-03 9.1528e-01 weaklyHypermeth 3.7040e-02 1.0000e+00 weaklyHypermeth 1.7561e-01 9.7408e-01 insignificant 6.6519e-01 1.0000e+00 insignificant 0.02583965 4.8833e-01 lowCoverage 1.0000e+00 lowCoverage 0.7648725 0.7705882 0.01330159 4 0.7263790 0.7468447 -0.02046573 3.4152e-01 3.8406e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 3.3297e-01 5.0138e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage -4.7428e-02 2.8419e-01 lowCoverage 1.00000000 lowCoverage 0.6704545 0.7705882 -0.0760328 4 0.6421684 0.7468447 -0.1046764 9.9311e-01 1.4875e-02 lowCoverage 1.0000e+00 7.0833e-02 lowCoverage 9.9245e-01 1.4196e-01 lowCoverage 1.0000e+00 5.9395e-01 lowCoverage -0.0732678 1.3963e-01 lowCoverage 5.6762e-01 lowCoverage chr17 7592350 7593350 49785 DNAH2 ENSG00000183914 0.720308 147 6 0.788451 316 6 0.701465 66 6 0.663118 150 6 0.6820433 82 6 0.797042 390 6 0.735653 69 6 0.720719 123 6 0.6815657 54 5 0.596032 51 6 0.849659 271 6 0.766667 17 0 0.6713049 97 6 0.7592105 81 6 0.8273430 86 6 0.6888889 16 2 0.814141 120 2 0.762258 306 5 0.744933 299 4 0.7045072 250 4 0.616667 25 2 0.804912 66 4 0.671311 115 6 0.684524 66 4 0.606771 64 4 0.7937753 308 6 0.6259214 65 6 0.676190 24 2 0.718897 278 6 0.7524431 357 6 0.743928 442 6 0.703141 275 6 0.7598901 154 6 0.4516329 116 5 0.6764836 211 5 0.266667 10 0 0.641403 96 6 0.6437347 298 6 0.725000 114 6 0.5594302 137 6 0.6842105 98 6 0.7186023 93 4 0.644487 143 6 0.7216723 0.719598 0.7315385 0.701463 0.6023977 0.734641 0.597143 0.7321283 0.6859444 0.7093889 0.7523671 0.790554 0.7964719 0.733566 0.7989440 0.6100000 0.826061 0.721641 0.7083245 0.6991565 0.656500 0.713699 0.672303 0.8011905 0.6533333 0.7388463 0.628829 0.641667 0.636837 0.7893340 0.7868433 0.6985803 0.7180769 0.53716132 0.69889816 0.32668919 0.643171 0.7051127 0.6882500 0.684133 0.7100000 0.6706770 0.6416513 1 0.705450 0.7232614 -0.01284823 6 0.7911453 0.7671062 0.02403914 0.5609304 9.3220e-01 insignificant 1.00000 1.0000e+00 insignificant 0.2232938 9.8341e-01 insignificant 1.00000 1.0000e+00 insignificant 0.03389218 0.1658719 lowCoverage 1.00000 lowCoverage 0.705450 0.6689266 2.9494e-02 6 0.7911453 0.6745965 0.11654878 3.9804e-02 9.6264e-01 weaklyHypermeth 1.4797e-01 1.0000e+00 insignificant 7.0604e-03 9.9996e-01 weaklyHypermeth 4.0345e-02 1.0000e+00 weaklyHypermeth 0.16046364 8.2337e-02 lowCoverage 3.9396e-01 lowCoverage 0.705450 0.6888889 0.03462791 6 0.7911453 0.6466256 0.1445197 9.5804e-04 9.8380e-01 weaklyHypermeth 1.2606e-02 1.0000e+00 weaklyHypermeth 2.6537e-02 9.6142e-01 weaklyHypermeth 2.8613e-01 1.0000e+00 insignificant 0.06741956 9.1615e-02 insignificant 7.2138e-01 insignificant 0.7232614 0.6689266 0.0422985 6 0.7671062 0.6745965 0.0925096 1.1234e-01 7.6548e-01 insignificant 3.9007e-01 1.0000e+00 insignificant 1.3866e-01 9.9550e-01 insignificant 5.5242e-01 1.0000e+00 insignificant 0.12657146 1.5114e-01 lowCoverage 5.9718e-01 lowCoverage 0.7232614 0.6888889 0.03012251 6 0.7671062 0.6466256 0.12048059 9.8331e-03 8.5669e-01 weaklyHypermeth 9.0212e-02 1.0000e+00 weaklyHypermeth 2.9307e-01 8.4946e-01 insignificant 1.0000e+00 1.0000000 insignificant 3.3527e-02 3.7860e-01 lowCoverage 1.00000000 lowCoverage 0.6689266 0.6888889 0.0064402 6 0.6745965 0.6466256 0.0279710 3.5642e-01 8.1988e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8669e-01 4.4462e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0930441 2.8459e-01 lowCoverage 9.5820e-01 lowCoverage chr17 8169150 8170150 49789 ARHGEF15 ENSG00000198844 0.824495 245 6 0.732682 125 6 0.798842 79 6 0.725239 184 6 0.8928571 31 4 0.825096 269 6 0.782077 54 6 0.849996 132 6 0.8379630 46 6 0.926217 75 6 0.807588 277 6 0.600000 12 0 0.9084282 95 5 0.9472222 60 4 0.8157952 63 6 0.5714286 34 4 0.833333 4 0 0.858768 224 6 0.821204 204 6 0.8278156 222 6 0.706429 32 3 0.659048 59 4 0.857267 88 5 0.827441 55 6 0.657430 141 4 0.8242823 174 6 0.6636364 89 5 0.907738 28 4 0.791464 113 6 0.7721163 199 6 0.818433 258 6 0.800245 250 6 0.7511991 120 6 0.6961994 130 6 0.8387605 81 4 0.916667 34 2 0.748581 80 6 0.8277330 228 6 0.711504 136 6 0.8802270 232 6 0.8231966 234 6 0.8797619 88 6 0.835836 147 6 0.8737711 0.795870 0.8255913 0.863488 0.8914940 0.863219 0.784306 0.8239310 0.8869805 0.9350726 0.8149227 0.617719 0.8893979 0.927099 0.8258195 0.7426390 0.849769 0.838918 0.8078953 0.8625034 0.663407 0.731482 0.902597 0.8379212 0.8721698 0.8418560 0.792274 0.848985 0.796583 0.8086868 0.8296146 0.8173950 0.7842392 0.73156652 0.82643210 0.88358779 0.763370 0.8352832 0.8100538 0.911049 0.8380191 0.8794438 0.8816758 4 0.854209 0.8438762 0.01656551 6 0.8064012 0.7291902 0.07721093 0.1082682 9.6077e-01 insignificant 1.00000 1.0000e+00 insignificant 0.1079933 9.9853e-01 insignificant 1.00000 1.0000e+00 insignificant 0.03555829 0.2779536 insignificant 1.00000 insignificant 0.854321 0.8068351 3.8853e-02 6 0.8252016 0.7855006 0.03970092 3.0844e-03 7.6238e-01 weaklyHypermeth 1.3831e-02 1.0000e+00 weaklyHypermeth 2.2281e-02 6.7274e-01 weaklyHypermeth 1.1230e-01 1.0000e+00 insignificant 0.01282902 7.4763e-01 insignificant 1.0000e+00 insignificant 0.854030 0.8853047 -0.01775157 6 0.7787442 0.7254190 0.0533252 9.0201e-01 3.6688e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.8785e-01 4.0565e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01675280 6.6586e-01 insignificant 1.0000e+00 insignificant 0.8442347 0.8068351 0.0222177 6 0.8055870 0.7855006 0.0200863 2.1558e-01 2.7462e-01 insignificant 7.0450e-01 1.0000e+00 insignificant 4.2279e-01 1.7905e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02272927 5.8574e-01 insignificant 1.0000e+00 insignificant 0.8436658 0.8853047 -0.03455450 6 0.6905031 0.7254190 -0.03491584 9.9885e-01 4.6124e-02 weaklyHypometh 1.0000e+00 8.3003e-01 insignificant 9.9979e-01 4.4241e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant -5.2311e-02 2.1392e-01 insignificant 1.00000000 insignificant 0.8068351 0.8863636 -0.0591117 6 0.7855006 0.8463221 -0.0608215 9.4794e-01 2.7037e-02 weaklyHypometh 1.0000e+00 1.1963e-01 insignificant 8.4876e-01 1.1174e-01 insignificant 1.0000e+00 5.0563e-01 insignificant -0.0295818 5.2554e-01 insignificant 1.0000e+00 insignificant chr17 8209750 8210750 49790 ODF4 ENSG00000184650 0.655961 311 8 0.617247 202 8 0.695416 174 8 0.752079 257 8 0.7247459 181 8 0.659348 380 10 0.518774 164 8 0.708393 236 8 0.5908324 161 8 0.810803 213 8 0.729676 286 8 0.732143 137 5 0.6763041 238 9 0.7337558 209 7 0.7933937 206 5 0.7375000 87 4 0.766667 27 3 0.697148 304 9 0.640115 225 8 0.7459650 233 8 0.789532 62 6 0.672077 105 5 0.663562 221 8 0.695113 124 8 0.833720 106 5 0.7635100 319 11 0.6366157 153 8 0.788233 150 6 0.651616 190 5 0.8343693 257 10 0.734082 263 8 0.809182 310 10 0.7541817 233 10 0.6149505 106 4 0.6881730 183 8 0.500000 23 1 0.773454 147 9 0.5964753 182 9 0.638630 268 8 0.5978904 259 7 0.8376078 279 8 0.7122934 172 6 0.783170 174 7 0.9241774 0.706777 0.8113294 0.911349 0.7661253 0.891950 0.802632 0.9196986 0.7738307 0.8991418 0.8909964 0.787882 0.8663359 0.866537 0.8863245 0.8364653 0.790050 0.885746 0.9164696 0.8974220 0.826893 0.902317 0.834572 0.9080771 0.8859588 0.9290578 0.816350 0.896648 0.886578 0.9446017 0.9407716 0.9479633 0.8242311 0.85705450 0.81417531 0.60439970 0.926096 0.8305437 0.9097692 0.920482 0.9057655 0.8786015 0.9350368 5 0.843536 0.8725664 -0.04176022 8 0.6877880 0.7467139 -0.05892588 0.9949068 4.5291e-04 weaklyHypometh 1.00000 4.1174e-02 weaklyHypometh 0.9933963 8.9068e-03 weaklyHypometh 1.00000 3.5627e-01 insignificant -0.03998763 0.1431266 insignificant 1.00000 insignificant 0.843536 0.7940503 2.1481e-02 8 0.6877880 0.6866849 0.00110313 9.9866e-02 3.1329e-01 insignificant 3.4918e-01 1.0000e+00 insignificant 4.8419e-01 5.4505e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.04477423 3.5837e-01 insignificant 1.0000e+00 insignificant 0.843536 0.9088542 -0.04174073 8 0.6877880 0.6773801 0.0104079 4.9760e-01 6.4056e-02 insignificant 1.0000e+00 6.7428e-01 insignificant 8.7821e-01 1.1239e-02 weaklyHypometh 1.0000e+00 3.1169e-01 insignificant -0.01460513 7.6847e-01 insignificant 1.0000e+00 insignificant 0.8725664 0.7940503 0.0641747 8 0.7467139 0.6866849 0.0600290 6.1579e-03 9.4261e-01 weaklyHypermeth 2.7008e-02 1.0000e+00 weaklyHypermeth 9.3138e-02 9.3743e-01 insignificant 3.8646e-01 1.0000e+00 insignificant 0.08476186 1.1363e-01 insignificant 4.8562e-01 insignificant 0.8725664 0.9088542 0.00058194 8 0.7467139 0.6773801 0.06933381 2.9144e-02 3.6493e-01 weaklyHypermeth 2.2948e-01 1.0000e+00 insignificant 4.0332e-01 2.0575e-01 insignificant 1.0000e+00 1.0000000 insignificant 2.5383e-02 6.2367e-01 insignificant 1.00000000 insignificant 0.7940503 0.9088542 -0.0614752 8 0.6866849 0.6773801 0.0093048 7.5192e-01 1.8089e-01 insignificant 1.0000e+00 6.5302e-01 insignificant 9.8079e-01 1.8438e-01 insignificant 1.0000e+00 7.3753e-01 insignificant -0.0593794 3.5888e-01 insignificant 1.0000e+00 insignificant chr17 12050950 12051950 49832 MIR744 ENSG00000211589 0.831250 190 6 0.775136 136 6 0.657853 118 6 0.694388 103 6 0.7808303 53 4 0.761521 281 6 0.713141 104 6 0.838477 132 6 0.5287837 104 6 0.795133 75 6 0.796489 198 6 0.692929 42 4 0.8122095 95 6 0.8578089 31 3 0.8449188 90 5 0.5818603 43 4 0.823311 50 4 0.845029 114 6 0.816672 207 6 0.7973127 211 6 0.814286 48 6 0.815476 73 5 0.879688 153 6 0.738398 75 5 0.809524 39 3 0.7545953 165 6 0.7606977 96 6 0.709091 50 4 0.859487 100 6 0.8714493 164 6 0.775054 164 6 0.856016 266 6 0.7152625 139 6 0.7003187 66 5 0.6997808 121 6 0.824074 39 4 0.771332 84 5 0.7524074 197 6 0.878504 180 6 0.8710203 211 6 0.8203100 135 6 0.8272733 151 6 0.864564 164 6 0.8415911 0.798937 0.6738290 0.754263 0.8330972 0.786498 0.769130 0.8545142 0.7146923 0.7768074 0.8001271 0.801197 0.8103427 0.789640 0.8315228 0.6242092 0.807088 0.855217 0.8196097 0.8207260 0.792481 0.835307 0.894296 0.8279978 0.7909774 0.7870096 0.799901 0.697727 0.826607 0.8905172 0.7929094 0.8690483 0.7425969 0.72584776 0.73302598 0.84678363 0.729010 0.7861608 0.8790824 0.878264 0.8204486 0.8335562 0.8857065 4 0.792175 0.8169419 -0.02893799 6 0.6805492 0.8293188 -0.14876958 0.9931430 6.8340e-02 insignificant 1.00000 7.3484e-01 insignificant 0.9862038 1.0630e-01 insignificant 1.00000 1.0000e+00 insignificant -0.04139411 0.1216134 insignificant 1.00000 insignificant 0.792175 0.7399381 5.3895e-02 6 0.6805492 0.7825062 -0.10195697 1.4251e-03 9.0030e-01 weaklyHypermeth 6.6768e-03 1.0000e+00 weaklyHypermeth 7.6869e-02 7.9218e-01 insignificant 3.3277e-01 1.0000e+00 insignificant 0.01839026 5.2692e-01 insignificant 1.0000e+00 insignificant 0.792580 0.8489893 -0.06681846 6 0.7823989 0.8563985 -0.0739996 9.9968e-01 2.2286e-03 weaklyHypometh 1.0000e+00 8.7835e-02 weaklyHypometh 9.9921e-01 5.6764e-03 weaklyHypometh 1.0000e+00 2.1024e-01 insignificant -0.09008159 9.1519e-04 weaklyHypometh 4.2481e-02 weaklyHypometh 0.8169419 0.7399381 0.0821312 6 0.8293188 0.7825062 0.0468126 2.5657e-09 9.8310e-01 weaklyHypermeth 2.1743e-08 1.0000e+00 weaklyHypermeth 2.4224e-03 9.3719e-01 weaklyHypermeth 1.5528e-02 1.0000e+00 weaklyHypermeth 0.05978436 3.9188e-02 weaklyHypermeth 2.1651e-01 insignificant 0.8167388 0.8489893 -0.03646760 6 0.8140917 0.8563985 -0.04230681 9.4713e-01 3.9468e-02 weaklyHypometh 1.0000e+00 7.7156e-01 insignificant 8.2242e-01 1.1232e-01 insignificant 1.0000e+00 1.0000000 insignificant -4.8687e-02 2.9305e-02 weaklyHypometh 0.45788675 insignificant 0.7391304 0.8489893 -0.1222232 6 0.7100082 0.8563985 -0.1463903 9.9453e-01 1.2605e-09 weaklyHypometh 1.0000e+00 1.8537e-08 weaklyHypometh 9.9338e-01 9.3393e-05 weaklyHypometh 1.0000e+00 1.3734e-03 weaklyHypometh -0.1084718 1.6305e-03 weaklyHypometh 2.2034e-02 weaklyHypometh chr17 12145350 12146350 49837 MIR744 ENSG00000211589 0.715794 222 6 0.639541 98 6 0.741520 113 6 0.671902 86 6 0.7611111 78 6 0.797368 156 6 0.839549 83 6 0.728734 88 6 0.6829966 59 5 0.762846 84 6 0.675287 129 6 0.880808 69 6 0.8291209 85 6 NA 0 0 0.8186003 103 6 0.7204678 104 6 0.701870 73 6 0.697151 122 6 0.772650 102 6 0.7322453 157 6 0.719949 50 5 0.638149 59 6 0.702306 153 6 0.798148 57 6 0.876190 56 6 0.8031746 127 6 0.7431818 69 5 0.667593 37 3 0.764478 54 6 0.9509259 115 6 0.750189 106 6 0.721634 272 6 0.6826007 92 6 0.6717601 122 6 0.6047952 232 6 0.777778 61 6 0.757158 61 6 0.7526503 111 6 0.697809 209 6 0.7439588 256 6 0.8464599 177 6 0.7728090 185 6 0.754998 125 6 0.7256338 0.644612 0.7488722 0.678383 0.7666667 0.810083 0.838940 0.7460816 0.6893094 0.7560932 0.6802755 0.886741 0.8371653 NA 0.8116311 0.7289760 0.709144 0.701297 0.7868132 0.7301488 0.741323 0.635910 0.715092 0.8015873 0.8743440 0.8116070 0.734712 0.682812 0.774917 0.9567347 0.7449072 0.7246855 0.6874748 0.67024261 0.60182801 0.77551020 0.766611 0.7547896 0.7024202 0.753396 0.8512594 0.7771894 0.7661121 6 0.756340 0.7679654 -0.01666983 6 0.7430018 0.7594085 -0.01640667 0.7730165 1.8830e-01 insignificant 1.00000 1.0000e+00 insignificant 0.8279532 1.2448e-01 insignificant 1.00000 1.0000e+00 insignificant -0.01556026 0.6002661 insignificant 1.00000 insignificant 0.756340 0.6686303 6.1141e-02 6 0.7430018 0.6846622 0.05833957 2.1955e-03 4.7733e-01 weaklyHypermeth 9.9793e-03 1.0000e+00 weaklyHypermeth 1.2499e-01 4.9589e-01 insignificant 5.1016e-01 1.0000e+00 insignificant 0.03797607 2.5170e-01 insignificant 9.0866e-01 insignificant 0.756340 0.7825630 -0.01879100 6 0.7430018 0.7573166 -0.0143148 8.7551e-01 9.2462e-02 insignificant 1.0000e+00 8.1825e-01 insignificant 9.4901e-01 7.7360e-02 insignificant 1.0000e+00 8.9545e-01 insignificant -0.01744047 5.5775e-01 insignificant 1.0000e+00 insignificant 0.7679654 0.6686303 0.0788685 6 0.7594085 0.6846622 0.0747462 1.1590e-02 9.5162e-01 weaklyHypermeth 4.7501e-02 1.0000e+00 weaklyHypermeth 1.5538e-01 9.7552e-01 insignificant 5.9993e-01 1.0000e+00 insignificant 0.05353633 1.7057e-01 insignificant 6.4854e-01 insignificant 0.7679654 0.7825630 -0.00031997 6 0.7594085 0.7573166 0.00209184 7.8575e-01 4.2951e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.3587e-01 6.2702e-01 insignificant 1.0000e+00 1.0000000 insignificant -1.8802e-03 9.5793e-01 insignificant 1.00000000 insignificant 0.6686303 0.7825630 -0.0850429 6 0.6846622 0.7573166 -0.0726544 9.6503e-01 6.1487e-02 insignificant 1.0000e+00 2.4894e-01 insignificant 9.5477e-01 1.3809e-01 insignificant 1.0000e+00 5.8022e-01 insignificant -0.0554165 1.6103e-01 insignificant 6.2563e-01 insignificant chr17 14182050 14183050 49884 HS3ST3B1 ENSG00000125430 0.578928 217 5 0.750592 207 5 0.727910 172 5 0.616435 128 5 NA 0 0 0.569871 154 4 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 NA 0 0 0.619357 78 4 NA 0 0 0.4874620 129 4 NA 0 0 NA 0 0 0.675125 132 5 NA 0 0 NA 0 0 0.8220332 178 5 NA 0 0 NA 0 0 NA 0 0 0.7981492 197 5 0.792303 223 5 0.465909 175 4 0.7326152 133 5 NA 0 0 0.6596992 79 5 NA 0 0 NA 0 0 0.7022494 160 5 0.532719 117 4 0.6138427 176 5 0.5958128 117 4 0.4479167 96 4 0.566592 107 4 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0.578802 0.6895028 -0.11071090 4 0.6348686 0.7355069 -0.10063827 0.9996680 8.1333e-03 lowCoverage 1.00000 2.2593e-01 lowCoverage 0.9994821 1.1201e-02 lowCoverage 1.00000 4.1288e-01 lowCoverage -0.08919599 0.2768941 lowCoverage 1.00000 lowCoverage 0.578802 0.6693548 -8.7674e-02 4 0.6348686 0.7026215 -0.06775285 8.3861e-02 3.9600e-02 lowCoverage 2.9738e-01 6.9689e-01 lowCoverage 4.5453e-01 7.3897e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.07668007 9.5736e-02 lowCoverage 4.4322e-01 lowCoverage 0.578802 0.4828711 0.09776929 4 0.6348686 0.5776254 0.0572433 3.1968e-02 2.9894e-01 lowCoverage 2.6420e-01 1.0000e+00 lowCoverage 4.1829e-02 6.2006e-01 lowCoverage 4.0761e-01 1.0000e+00 lowCoverage 0.07013132 1.5333e-01 lowCoverage 9.3492e-01 lowCoverage 0.6895028 0.6693548 0.0218082 5 0.7355069 0.7026215 0.0328854 3.0039e-02 8.5646e-01 weaklyHypermeth 1.1598e-01 1.0000e+00 insignificant 1.2104e-01 9.2711e-01 insignificant 4.9403e-01 1.0000e+00 insignificant 0.01251592 8.6466e-01 lowCoverage 1.0000e+00 lowCoverage 0.6895028 0.4828711 0.22571984 4 0.7355069 0.5776254 0.15788153 2.1033e-04 3.4141e-01 lowCoverage 2.9624e-03 1.0000e+00 lowCoverage 5.6293e-03 4.3551e-01 lowCoverage 9.0795e-02 1.0000000 lowCoverage 1.5933e-01 7.4297e-02 lowCoverage 0.72839801 lowCoverage 0.6693548 0.4828711 0.1996932 4 0.7026215 0.5776254 0.1249961 2.2523e-05 1.3093e-01 lowCoverage 1.0238e-03 4.9223e-01 lowCoverage 6.8337e-03 3.3055e-01 lowCoverage 2.2779e-01 1.0000e+00 lowCoverage 0.1468114 6.6281e-03 lowCoverage 5.4778e-02 lowCoverage chr17 15133650 15134650 49920 PMP22 ENSG00000109099 0.484169 61 5 0.663077 66 5 0.573333 33 3 0.502053 57 5 0.6000000 26 3 0.536883 52 5 0.530000 34 5 0.576850 53 5 0.7333333 13 2 0.933333 11 0 0.580781 98 5 0.366667 13 0 0.7481319 56 5 0.5300000 29 3 0.6500000 23 2 0.7200000 15 2 0.600000 39 2 0.695238 43 5 0.516667 25 3 0.7147959 45 5 0.479167 14 0 1.000000 9 0 0.473993 33 3 0.517857 34 3 0.485714 36 3 0.6090226 62 5 0.4523810 25 3 0.150000 11 0 0.550000 40 5 0.6641026 76 5 0.671429 50 3 0.527778 53 5 0.6276190 54 5 0.3888889 34 4 0.4856506 78 5 0.100000 8 0 0.486111 50 5 0.5773893 60 5 0.413333 75 5 0.4762069 73 5 0.4584416 71 5 0.4285714 37 3 0.521818 55 5 0.6186793 0.745192 0.6488095 0.634694 0.7142857 0.579754 0.641964 0.6809001 0.6512467 0.9107143 0.7307544 0.431548 0.7727630 0.669643 0.6562500 0.7857143 0.803571 0.788265 0.6473214 0.6839923 0.633091 0.844691 0.515764 0.8013393 0.6505102 0.7136144 0.546344 0.200893 0.691964 0.7435897 0.8099490 0.6870040 0.7028061 0.46428571 0.57199357 0.13392857 0.630952 0.6503497 0.5416667 0.602063 0.6139842 0.5484694 0.6393398 0 0.645202 0.6862302 -0.01243815 3 0.6993669 0.4168164 0.28255051 0.7580149 7.2853e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.1221535 9.7946e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.06431206 0.3207001 lowCoverage 1.00000 lowCoverage 0.644304 0.5352113 6.4316e-02 5 0.5791136 0.5185931 0.06052053 1.3683e-02 9.6593e-01 weaklyHypermeth 5.6309e-02 1.0000e+00 weaklyHypermeth 8.4197e-04 9.9643e-01 weaklyHypermeth 5.8067e-03 1.0000e+00 weaklyHypermeth 0.16848917 8.1607e-02 lowCoverage 3.9234e-01 lowCoverage 0.644304 0.5819936 0.08960690 5 0.5791136 0.4647726 0.1143410 9.8945e-03 9.5530e-01 weaklyHypermeth 1.0201e-01 1.0000e+00 insignificant 1.4543e-03 9.9797e-01 weaklyHypermeth 3.0299e-02 1.0000e+00 weaklyHypermeth 0.15309138 1.9095e-04 lowCoverage 1.6121e-02 lowCoverage 0.6893424 0.5352113 0.0860233 3 0.5835429 0.5185931 0.0649498 5.0077e-02 7.8800e-01 lowCoverage 1.8547e-01 1.0000e+00 lowCoverage 2.0004e-02 5.7172e-01 lowCoverage 1.0103e-01 1.0000e+00 lowCoverage 0.10417711 2.9825e-01 lowCoverage 9.9598e-01 lowCoverage 0.6893424 0.5819936 0.09993881 3 0.5835429 0.4647726 0.11877031 1.1310e-02 9.6115e-01 lowCoverage 1.0098e-01 1.0000e+00 lowCoverage 4.0678e-02 9.7620e-01 lowCoverage 3.8057e-01 1.0000000 lowCoverage 8.8779e-02 1.5932e-01 lowCoverage 1.00000000 lowCoverage 0.5352113 0.5819936 0.0476670 5 0.5185931 0.4647726 0.0538205 3.8272e-04 4.0380e-01 weaklyHypermeth 1.1598e-02 1.0000e+00 weaklyHypermeth 9.4421e-02 2.3420e-01 insignificant 1.0000e+00 9.0077e-01 insignificant -0.0153978 8.5235e-01 lowCoverage 1.0000e+00 lowCoverage chr17 15808150 15809150 49943 ADORA2B ENSG00000170425 0.807304 140 8 0.573932 129 8 0.632026 69 5 0.819444 103 6 0.7968750 56 6 0.720385 105 8 0.683069 61 4 0.835413 127 8 0.7542735 50 2 0.701515 54 2 0.833140 168 8 0.678571 24 2 0.7495126 101 8 0.8537090 83 8 0.8120491 84 8 0.7916667 25 2 0.833333 6 0 0.506951 111 3 0.810714 107 8 0.8232143 70 8 0.787500 37 5 0.833333 18 0 0.721642 73 6 0.795265 46 4 0.803175 62 6 0.7865260 119 6 0.8569444 45 4 0.600000 24 1 0.781161 101 8 0.7758538 126 8 0.847104 105 8 0.568452 70 8 0.7000347 131 8 0.6607100 80 8 0.7874780 117 8 0.750000 4 0 0.660110 93 4 0.7737332 85 8 0.800099 117 8 0.8814876 136 8 0.7162115 100 6 0.7773438 73 2 0.719872 98 8 0.7790884 0.658609 0.6373730 0.825301 0.7786145 0.806274 0.776305 0.8406928 0.7347081 0.7144578 0.8410962 0.703959 0.7566764 0.874713 0.8394704 0.8152610 0.841153 0.597768 0.7912794 0.8199656 0.771084 0.845401 0.677628 0.8077035 0.8006507 0.8204037 0.866667 0.632530 0.782232 0.7946027 0.8147977 0.6672762 0.7149933 0.67904774 0.77146682 0.70683390 0.630185 0.7973064 0.8156913 0.871495 0.7322736 0.7925452 0.7403769 0 0.782036 0.7675545 0.01609112 8 0.7209084 0.7255501 -0.00464162 0.5360609 8.6642e-01 insignificant 1.00000 1.0000e+00 insignificant 0.6640178 4.4044e-01 insignificant 1.00000 1.0000e+00 insignificant -0.01222481 0.7214283 insignificant 1.00000 insignificant 0.783053 0.7156863 7.2294e-02 8 0.7454538 0.7446257 0.00082814 1.9893e-03 8.9498e-01 weaklyHypermeth 9.0836e-03 1.0000e+00 weaklyHypermeth 3.2174e-02 9.8816e-01 weaklyHypermeth 1.5468e-01 1.0000e+00 insignificant 0.02884385 3.7287e-01 insignificant 1.0000e+00 insignificant 0.785584 0.8167939 -0.01151928 8 0.7809432 0.7831165 -0.0021733 6.8034e-01 1.9564e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.4100e-01 6.3000e-02 insignificant 1.0000e+00 8.1818e-01 insignificant -0.02814787 4.6851e-01 insignificant 1.0000e+00 insignificant 0.7679222 0.7156863 0.0586885 8 0.7320927 0.7446257 -0.0125330 1.0053e-02 9.4302e-01 weaklyHypermeth 4.1715e-02 1.0000e+00 weaklyHypermeth 1.9968e-02 9.7811e-01 weaklyHypermeth 1.0103e-01 1.0000e+00 insignificant 0.04106866 2.5777e-01 insignificant 9.0131e-01 insignificant 0.7685749 0.8167939 -0.02383722 8 0.7611042 0.7831165 -0.02201228 8.9765e-01 1.1548e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.8514e-01 2.6924e-01 insignificant 1.0000e+00 1.0000000 insignificant -1.5923e-02 6.9976e-01 insignificant 1.00000000 insignificant 0.7145669 0.8167939 -0.0734112 8 0.7127039 0.7831165 -0.0704126 9.7635e-01 6.1498e-04 weaklyHypometh 1.0000e+00 3.9730e-03 weaklyHypometh 9.7857e-01 6.8767e-03 weaklyHypometh 1.0000e+00 4.8927e-02 weaklyHypometh -0.0569917 1.7318e-01 insignificant 6.5350e-01 insignificant chr17 16117750 16118750 49953 PIGL ENSG00000108474 0.811368 309 7 0.734200 219 7 0.491571 86 7 0.767817 246 7 0.7124035 69 5 0.771820 446 7 0.648243 102 7 0.782284 201 7 0.7394619 113 7 0.784109 115 5 0.642906 337 7 0.589487 54 6 0.6582596 181 7 0.7821078 56 3 0.7408475 132 7 0.5992063 44 4 0.646965 198 4 0.740894 227 7 0.732843 300 7 0.7529315 338 7 0.729630 67 4 0.760551 75 7 0.816491 200 7 0.803509 87 4 0.716848 94 7 0.7160908 278 7 0.7597403 81 7 0.812802 51 4 0.712384 196 7 0.7580010 307 7 0.804412 304 7 0.802625 415 7 0.7168878 225 7 0.5893486 143 7 0.7019332 244 7 0.622711 42 4 0.688549 108 7 0.7101875 286 7 0.707376 238 7 0.8387090 249 7 0.7881415 220 7 0.7771923 163 7 0.793501 211 7 0.8643314 0.749055 0.6566473 0.809934 0.7858335 0.829667 0.752041 0.8066915 0.7981143 0.7856953 0.7846185 0.670600 0.7977935 0.761866 0.7887562 0.7703283 0.791601 0.810793 0.8255137 0.8005522 0.743682 0.884040 0.861241 0.8134704 0.7989798 0.7655139 0.775493 0.819069 0.779190 0.7910371 0.7703866 0.8082925 0.7412422 0.65797304 0.76720453 0.65825968 0.744476 0.7385681 0.8006270 0.835112 0.8497838 0.8600125 0.8428255 4 0.820302 0.8129930 -0.00107636 7 0.6917976 0.7844541 -0.09265652 0.8795598 2.8589e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9899496 1.2817e-01 insignificant 1.00000 1.0000e+00 insignificant -0.05960412 0.0105315 weaklyHypometh 0.81716 insignificant 0.820717 0.7423664 6.1763e-02 7 0.7084970 0.7192832 -0.01078619 9.6877e-04 9.5130e-01 weaklyHypermeth 4.6576e-03 1.0000e+00 weaklyHypermeth 2.7462e-02 9.7275e-01 weaklyHypermeth 1.3462e-01 1.0000e+00 insignificant 0.03488349 2.3942e-01 insignificant 8.8022e-01 insignificant 0.820302 0.8362627 -0.03408022 7 0.6917976 0.7894313 -0.0976337 9.9943e-01 5.2220e-02 insignificant 1.0000e+00 5.9341e-01 insignificant 9.9969e-01 2.7656e-02 weaklyHypometh 1.0000e+00 5.4228e-01 insignificant -0.07449783 2.2350e-02 weaklyHypometh 3.2867e-01 insignificant 0.8127620 0.7423664 0.0602052 7 0.7555677 0.7192832 0.0362845 4.8711e-03 9.9263e-01 weaklyHypermeth 2.2041e-02 1.0000e+00 weaklyHypermeth 9.5055e-03 9.9842e-01 weaklyHypermeth 5.1943e-02 1.0000e+00 weaklyHypermeth 0.09448761 4.7506e-03 weaklyHypermeth 4.0953e-02 weaklyHypermeth 0.8129930 0.8362627 -0.03416948 7 0.7844541 0.7894313 -0.00497718 9.6430e-01 9.0695e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6416e-01 2.8016e-01 insignificant 1.0000e+00 1.0000000 insignificant -1.4894e-02 5.5913e-01 insignificant 1.00000000 insignificant 0.7423664 0.8365831 -0.0953540 7 0.7192832 0.7992892 -0.0800059 9.9956e-01 9.7249e-04 weaklyHypometh 1.0000e+00 6.0030e-03 weaklyHypometh 9.9950e-01 1.1931e-04 weaklyHypometh 1.0000e+00 1.6571e-03 weaklyHypometh -0.1093813 5.6396e-03 weaklyHypometh 5.0073e-02 weaklyHypometh chr17 16241150 16242150 49960 UBB ENSG00000170315 0.719129 263 8 0.588865 225 7 0.689682 154 7 0.685505 192 7 0.6912865 116 7 0.658114 260 6 0.641616 114 7 0.637757 107 7 0.5331608 129 7 0.536990 87 5 0.590102 160 7 0.671667 72 7 0.6474206 121 7 0.8064394 38 4 0.6517561 99 7 0.5625000 58 4 0.652752 95 7 0.649606 186 8 0.621939 186 5 0.6601137 224 5 0.758333 33 3 0.700000 46 4 0.629961 200 7 0.426531 66 5 0.720238 38 4 0.6142782 254 7 0.7490530 51 5 0.789116 72 5 0.687947 137 7 0.6933056 245 8 0.641980 287 7 0.610180 250 5 0.6102564 139 7 0.5589827 73 6 0.5658220 143 7 0.630808 43 4 0.630009 97 5 0.5707144 250 7 0.654822 225 7 0.6638320 291 8 0.7081358 190 8 0.7275858 222 7 0.605363 186 7 0.6729428 0.544866 0.6049167 0.603926 0.6257841 0.604304 0.629032 0.5902001 0.5637484 0.5100446 0.5470996 0.530000 0.6425733 0.621695 0.5661695 0.6358025 0.597337 0.599763 0.6103301 0.6073759 0.583642 0.662963 0.582012 0.5330026 0.6111111 0.6255286 0.580773 0.683642 0.656431 0.6541296 0.5749116 0.6237036 0.5536483 0.51349557 0.59657446 0.60907962 0.637809 0.5705156 0.6244162 0.612776 0.5955610 0.6472961 0.6093181 4 0.665974 0.6730197 -0.02052354 7 0.6399519 0.6599339 -0.01998205 0.7312577 2.2196e-01 insignificant 1.00000 1.0000e+00 insignificant 0.8530520 9.9957e-02 insignificant 1.00000 9.7997e-01 insignificant -0.02359006 0.4580661 insignificant 1.00000 insignificant 0.665974 0.6295302 2.4389e-02 7 0.6399519 0.5783318 0.06162006 6.7722e-03 4.4939e-01 weaklyHypermeth 2.8941e-02 1.0000e+00 weaklyHypermeth 1.4783e-02 5.1351e-01 weaklyHypermeth 7.9055e-02 1.0000e+00 weaklyHypermeth 0.05038805 1.9916e-02 weaklyHypermeth 1.2849e-01 insignificant 0.665974 0.7253142 -0.03918086 7 0.6399519 0.6862602 -0.0463083 8.6156e-01 3.0636e-02 weaklyHypometh 1.0000e+00 4.3980e-01 insignificant 8.8146e-01 1.5276e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02712764 3.2232e-01 insignificant 1.0000e+00 insignificant 0.6730197 0.6295302 0.0439346 7 0.6599339 0.5783318 0.0816021 1.9849e-03 2.8091e-01 weaklyHypermeth 9.4518e-03 1.0000e+00 weaklyHypermeth 5.6391e-03 4.0572e-01 weaklyHypermeth 3.2040e-02 1.0000e+00 weaklyHypermeth 0.07397811 2.9562e-02 weaklyHypermeth 1.7334e-01 insignificant 0.6730197 0.7253142 -0.01643180 7 0.6599339 0.6862602 -0.02632630 8.0830e-01 7.0126e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 5.1072e-01 5.5227e-01 insignificant 1.0000e+00 1.0000000 insignificant -3.5376e-03 9.2088e-01 insignificant 1.00000000 insignificant 0.6295302 0.7253142 -0.0601725 7 0.5783318 0.6862602 -0.1079284 7.7401e-01 2.6221e-03 weaklyHypometh 1.0000e+00 1.4984e-02 weaklyHypometh 8.1969e-01 9.5555e-03 weaklyHypometh 1.0000e+00 6.4980e-02 weaklyHypometh -0.0775157 1.8592e-02 weaklyHypometh 1.2394e-01 insignificant chr17 16360050 16361050 49966 C17orf76 ENSG00000181350 0.320056 144 3 0.230870 147 5 0.441906 127 5 0.288341 93 3 0.4066047 87 5 0.734721 169 3 0.393472 185 7 0.281037 200 5 0.2436052 146 3 0.429263 112 3 0.451266 179 5 0.323810 74 3 0.0206897 88 5 0.2214286 53 2 0.2454212 123 3 0.6185185 75 5 0.000000 30 1 0.162812 217 3 0.068033 243 3 0.1498572 181 7 0.485714 47 3 0.000000 3 0 0.484942 101 3 0.312821 80 5 0.044444 21 2 0.1351970 108 5 0.2415340 128 5 0.205556 48 3 0.436887 168 3 0.0735310 133 5 0.056137 216 5 0.600620 242 7 0.0320988 198 4 0.0000000 145 3 0.0100000 158 5 NA 0 0 0.024542 137 5 0.0027397 193 5 0.240066 210 3 0.2047107 210 5 0.2559650 200 5 0.0920090 151 3 0.332217 211 5 0.5254134 0.239683 0.3781856 0.359964 0.3209984 0.451584 0.369986 0.2352494 0.2377010 0.5251825 0.4107068 0.451512 0.0234080 0.278067 0.2940483 0.6176669 0.244313 0.234637 0.0666050 0.0792795 0.654745 0.000000 0.460023 0.1202695 0.0859692 0.1377587 0.227074 0.228873 0.229372 0.0932028 0.0473728 0.5108934 0.0055871 0.00000000 0.01934307 NA 0.019839 0.0052995 0.0663585 0.140512 0.1195533 0.0848864 0.1518901 3 0.289936 0.2612056 0.02889286 5 0.4084624 0.4294062 -0.02094381 0.1518485 4.3820e-01 insignificant 1.00000 1.0000e+00 insignificant 0.1083304 8.7921e-01 insignificant 1.00000 1.0000e+00 insignificant 0.04513700 0.5382032 lowCoverage 1.00000 lowCoverage 0.289671 0.0096270 2.7899e-01 5 0.3239570 0.0079660 0.31599102 2.7836e-11 1.0000e+00 hypermethylated 2.4853e-10 1.0000e+00 hypermethylated 1.9026e-08 1.0000e+00 hypermethylated 2.9728e-07 1.0000e+00 hypermethylated 0.28770947 1.1854e-06 lowCoverage 3.0360e-05 lowCoverage 0.288520 0.1242363 0.15034874 5 0.3085054 0.3240016 -0.0154962 8.1756e-03 3.3621e-01 weaklyHypermeth 8.8866e-02 1.0000e+00 weaklyHypermeth 2.1650e-03 7.3625e-01 weaklyHypermeth 4.1634e-02 1.0000e+00 weaklyHypermeth 0.07659201 2.0052e-01 lowCoverage 1.0000e+00 lowCoverage 0.2606342 0.0096270 0.2423759 5 0.3478928 0.0079660 0.3399268 1.7712e-06 1.0000e+00 hypermethylated 1.2049e-05 1.0000e+00 hypermethylated 1.4257e-05 9.9999e-01 hypermethylated 1.5497e-04 1.0000e+00 hypermethylated 0.24257247 1.7321e-03 lowCoverage 1.8042e-02 lowCoverage 0.2556863 0.1242363 0.11145389 5 0.3040231 0.3240016 -0.01997855 1.2717e-01 3.0701e-01 insignificant 7.5251e-01 1.0000e+00 insignificant 5.5650e-01 3.7608e-01 insignificant 1.0000e+00 1.0000000 insignificant 3.1455e-02 6.6376e-01 lowCoverage 1.00000000 lowCoverage 0.0096386 0.1242363 -0.1325863 5 0.0092937 0.3240016 -0.3147080 1.0000e+00 2.7754e-10 weaklyHypometh 1.0000e+00 4.6256e-09 weaklyHypometh 1.0000e+00 9.5275e-06 weaklyHypometh 1.0000e+00 2.0201e-04 weaklyHypometh -0.2111175 5.2428e-03 lowCoverage 4.8135e-02 lowCoverage chr17 16360450 16361450 49967 C17orf76 ENSG00000181350 0.320056 144 3 0.192391 148 5 0.511668 128 5 0.288341 93 3 0.4913755 89 5 0.734721 169 3 0.393472 185 7 0.281037 200 5 0.2436052 146 3 0.429263 112 3 0.394857 180 5 0.323810 74 3 0.0206897 88 5 0.2214286 53 2 0.2454212 123 3 0.6185185 75 5 0.000000 30 1 0.162812 217 3 0.068033 243 3 0.1498572 181 7 0.550000 48 3 0.250000 5 0 0.484942 101 3 0.312821 80 5 0.044444 21 2 0.2793308 110 5 0.2415340 128 5 0.205556 48 3 0.436887 168 3 0.2279425 134 5 0.056137 216 5 0.600620 242 7 0.0320988 198 4 0.0000000 145 3 0.0100000 158 5 1.000000 3 0 0.187118 140 5 0.0027397 193 5 0.240066 210 3 0.2047107 210 5 0.3799708 201 5 0.0920090 151 3 0.427614 212 5 0.5254134 0.239683 0.3781856 0.359964 0.3209984 0.451584 0.369986 0.2352494 0.2377010 0.5251825 0.4107068 0.451512 0.0234080 0.278067 0.2940483 0.6176669 0.244313 0.234637 0.0666050 0.0792795 0.654745 0.000000 0.460023 0.1202695 0.0859692 0.1377587 0.227074 0.228873 0.229372 0.0932028 0.0473728 0.5108934 0.0055871 0.00000000 0.01934307 NA 0.019839 0.0052995 0.0663585 0.140512 0.1195533 0.0848864 0.1518901 3 0.290515 0.2646154 0.02788765 5 0.4297444 0.4928055 -0.06306117 0.2339122 2.9226e-01 insignificant 1.00000 1.0000e+00 insignificant 0.1795480 6.9235e-01 insignificant 1.00000 1.0000e+00 insignificant -0.00294995 0.9652136 lowCoverage 1.00000 lowCoverage 0.290250 0.0167264 2.7765e-01 5 0.3584624 0.1319702 0.22649215 1.3613e-10 9.9923e-01 hypermethylated 1.1635e-09 1.0000e+00 hypermethylated 8.5017e-08 9.9921e-01 hypermethylated 1.2145e-06 1.0000e+00 hypermethylated 0.09924174 5.7538e-01 lowCoverage 1.0000e+00 lowCoverage 0.289107 0.1260163 0.14917127 5 0.3501475 0.4205728 -0.0704253 1.7729e-02 2.7322e-01 weaklyHypermeth 1.6117e-01 1.0000e+00 insignificant 5.7250e-03 6.2114e-01 weaklyHypermeth 8.5447e-02 1.0000e+00 weaklyHypermeth 0.03569362 6.4292e-01 lowCoverage 1.0000e+00 lowCoverage 0.2640493 0.0167264 0.2412290 5 0.4294062 0.1319702 0.2974360 7.0474e-06 1.0000e+00 hypermethylated 4.3236e-05 1.0000e+00 hypermethylated 5.1302e-05 1.0000e+00 hypermethylated 5.0296e-04 1.0000e+00 hypermethylated 0.10219169 5.6871e-01 lowCoverage 1.0000e+00 lowCoverage 0.2591725 0.1260163 0.11103185 5 0.4034484 0.4205728 -0.01712447 2.2383e-01 4.5703e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.1095e-01 5.3412e-01 insignificant 1.0000e+00 1.0000000 insignificant 3.8644e-02 6.3805e-01 lowCoverage 1.00000000 lowCoverage 0.0167464 0.1260163 -0.1321578 5 0.1508231 0.4205728 -0.2697497 1.0000e+00 1.6801e-09 weaklyHypometh 1.0000e+00 2.3663e-08 weaklyHypometh 1.0000e+00 3.7871e-05 weaklyHypometh 1.0000e+00 6.3767e-04 weaklyHypometh -0.0635481 7.2471e-01 lowCoverage 1.0000e+00 lowCoverage chr17 16704550 16705550 49971 ENSG00000205310 0.809588 60 4 0.898471 152 4 0.738433 148 5 0.599899 57 3 0.7798256 154 5 0.873390 96 4 0.746157 184 4 0.917593 129 6 0.8389444 147 6 0.871905 92 4 0.834911 210 6 0.788243 114 4 0.6082381 159 6 0.8854167 50 2 0.9027778 140 5 0.8541351 128 4 0.779592 103 3 0.886364 35 1 0.880326 225 6 0.8250000 77 4 0.826515 95 4 0.732026 29 3 0.861321 117 6 0.799994 84 6 0.770161 35 1 0.6703131 155 6 0.7624339 94 5 0.802431 68 3 0.778594 105 6 0.8386247 187 6 0.775085 225 6 0.897614 137 5 0.8531327 167 6 0.6352381 103 4 0.7494636 228 6 1.000000 6 0 0.642988 111 6 0.8279062 122 4 0.952381 65 2 0.9173882 67 5 0.6648551 36 1 0.6093750 20 1 0.601562 56 3 0.7735282 0.724298 0.5225543 0.776828 0.7574705 0.802758 0.781600 0.8124862 0.7261592 0.6422207 0.7809216 0.571154 0.5931947 0.718782 0.7326733 0.6131432 0.984272 0.453195 0.7396878 0.7346535 0.904815 0.597943 0.755887 0.8509469 0.6330304 0.6462784 0.563806 0.530027 0.829030 0.7312135 0.7840821 0.7286781 0.6768852 0.33627534 0.20894016 0.97919881 0.630154 0.5633773 0.7708628 0.656230 0.7210504 0.4984972 0.8001238 1 0.821545 0.7753569 0.01017671 6 0.6968671 0.7680197 -0.07115264 0.2625749 7.2126e-01 insignificant 1.00000 1.0000e+00 insignificant 0.0928350 8.5191e-01 insignificant 1.00000 1.0000e+00 insignificant 0.02303429 0.3909232 lowCoverage 1.00000 lowCoverage 0.822811 0.6716418 1.4350e-01 6 0.7678481 0.6583350 0.10951309 3.3997e-05 9.9273e-01 weaklyHypermeth 1.8578e-04 1.0000e+00 weaklyHypermeth 8.9297e-02 9.9393e-01 insignificant 3.7520e-01 1.0000e+00 insignificant 0.03117229 6.2200e-01 lowCoverage 1.0000e+00 lowCoverage 0.821545 0.7622951 -0.01350666 2 0.6968671 0.6761181 0.0207490 8.9483e-01 5.6208e-03 lowCoverage 1.0000e+00 1.5264e-01 lowCoverage 9.6863e-01 5.8733e-02 lowCoverage 1.0000e+00 7.9369e-01 lowCoverage 0.06684804 4.4165e-01 lowCoverage 1.0000e+00 lowCoverage 0.7761869 0.6716418 0.1442145 6 0.8063083 0.6583350 0.1479733 5.4872e-03 9.8278e-01 weaklyHypermeth 2.4497e-02 1.0000e+00 weaklyHypermeth 4.1056e-01 8.6815e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00813800 8.9542e-01 lowCoverage 1.0000e+00 lowCoverage 0.7753569 0.7622951 -0.01166330 2 0.7680197 0.6761181 0.09190165 4.5799e-01 5.5388e-03 lowCoverage 1.0000e+00 2.0514e-01 lowCoverage 7.2533e-01 4.5455e-03 lowCoverage 1.0000e+00 0.3787932 lowCoverage 4.3814e-02 6.0500e-01 lowCoverage 1.00000000 lowCoverage 0.6716418 0.7685950 -0.1884931 2 0.6583350 0.7727064 -0.1143714 9.9985e-01 6.0113e-03 lowCoverage 1.0000e+00 3.1788e-02 lowCoverage 9.9998e-01 3.3819e-02 lowCoverage 1.0000e+00 1.8893e-01 lowCoverage 0.0356758 7.1878e-01 lowCoverage 1.0000e+00 lowCoverage chr17 16852950 16853950 49973 ENSG00000108516 0.807319 504 9 0.698606 126 9 0.744928 127 9 0.736650 186 9 0.7105888 87 8 0.762217 433 9 0.756481 91 9 0.827612 122 9 0.7063492 67 9 0.765653 116 9 0.781586 232 9 0.786195 70 9 0.7906461 149 9 NA 0 0 0.7822440 200 9 0.5601251 113 9 0.640500 98 9 0.793029 226 9 0.806573 171 9 0.7682247 344 9 0.692110 192 5 0.724098 86 9 0.730355 196 9 0.742067 107 9 0.772350 85 9 0.7550835 95 8 0.6136644 93 8 0.754972 125 9 0.862121 78 6 0.7733668 169 9 0.834505 167 9 0.758368 415 9 0.6149313 89 9 0.6261447 127 9 0.4096138 115 5 0.703155 136 9 0.734785 225 9 0.6907407 82 9 0.800609 441 9 0.8256420 496 9 0.7406961 336 9 0.7768740 413 9 0.841361 328 9 0.8240611 0.711770 0.7466439 0.755138 0.7333840 0.785206 0.775098 0.8446690 0.7221757 0.7820195 0.8022224 0.804503 0.8118778 NA 0.7987411 0.5914455 0.635879 0.812543 0.8309567 0.7864019 0.724295 0.737213 0.747708 0.7566450 0.7990869 0.7755209 0.648443 0.774267 0.883902 0.7958115 0.8453992 0.7817964 0.6282929 0.63287183 0.53578774 0.73041868 0.755032 0.7057511 0.8204771 0.843920 0.7562037 0.7934662 0.8551890 9 0.764876 0.7853982 -0.00431615 9 0.7641516 0.7673338 -0.00318221 0.6310695 4.7891e-01 insignificant 1.00000 1.0000e+00 insignificant 0.2974356 2.3632e-01 insignificant 1.00000 1.0000e+00 insignificant -0.00237644 0.9201641 insignificant 1.00000 insignificant 0.764876 0.6330749 1.0042e-01 9 0.7641516 0.6677264 0.09642520 1.7086e-06 9.9984e-01 weaklyHypermeth 1.0612e-05 1.0000e+00 weaklyHypermeth 2.8465e-03 9.9943e-01 weaklyHypermeth 1.7915e-02 1.0000e+00 weaklyHypermeth 0.11881696 5.5623e-02 insignificant 2.8820e-01 insignificant 0.764876 0.7889772 -0.03391165 9 0.7641516 0.7988999 -0.0347483 9.9803e-01 6.8507e-02 insignificant 1.0000e+00 7.0626e-01 insignificant 9.8955e-01 4.7241e-02 weaklyHypometh 1.0000e+00 6.8466e-01 insignificant -0.04832430 6.2815e-02 insignificant 5.8162e-01 insignificant 0.7853982 0.6330749 0.1096108 9 0.7673338 0.6677264 0.0996074 8.5337e-06 9.9242e-01 weaklyHypermeth 5.2035e-05 1.0000e+00 weaklyHypermeth 6.1192e-04 9.3129e-01 weaklyHypermeth 4.6358e-03 1.0000e+00 weaklyHypermeth 0.12119340 5.2775e-02 insignificant 2.6789e-01 insignificant 0.7853982 0.7889772 -0.02810219 9 0.7673338 0.7988999 -0.03156606 9.7965e-01 1.2196e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6479e-01 8.3946e-02 insignificant 1.0000e+00 1.0000000 insignificant -4.5948e-02 9.7094e-02 insignificant 0.80537172 insignificant 0.6330749 0.7889772 -0.1378621 9 0.6677264 0.7988999 -0.1311735 9.9999e-01 6.0318e-05 weaklyHypometh 1.0000e+00 4.9039e-04 weaklyHypometh 9.9998e-01 1.5581e-03 weaklyHypometh 1.0000e+00 1.3911e-02 weaklyHypometh -0.1671413 1.5771e-02 weaklyHypometh 1.0952e-01 insignificant chr17 17381150 17382150 49991 RASD1 ENSG00000108551 0.830677 207 7 0.875327 167 5 0.829139 177 5 0.811214 239 5 0.8625000 77 7 0.783854 332 6 0.781906 149 7 0.916375 129 5 0.8493116 191 5 0.932542 146 5 0.875066 187 7 0.867282 67 4 0.9024320 227 5 0.6582633 68 5 0.9122549 151 5 0.8412433 42 4 0.792000 65 5 0.857938 253 5 0.747766 178 5 0.8293382 267 6 0.822135 102 5 0.860950 136 5 0.935411 176 5 0.828283 106 6 0.750463 137 7 0.8248429 215 6 0.7657517 123 5 0.797858 103 5 0.758986 150 6 0.9042867 205 7 0.928382 323 7 0.930341 361 7 0.9506798 216 7 0.9168651 107 7 0.9031385 200 7 0.861678 87 6 0.806622 176 5 0.9712420 250 7 0.803564 217 5 0.7514266 262 6 0.8906381 188 5 0.8114672 195 5 0.838312 230 7 0.8257329 0.813968 0.7678727 0.879473 0.9413793 0.855715 0.915847 0.8849818 0.8470385 0.9048159 0.8777770 0.843077 0.8603650 0.829661 0.9146229 0.8315541 0.852414 0.850854 0.9062689 0.8934265 0.868497 0.810502 0.896662 0.9162439 0.9104869 0.8727588 0.772394 0.826254 0.875269 0.9060165 0.9097802 0.9124818 0.9543919 0.88553018 0.98347107 0.77680748 0.888100 0.9517626 0.8661624 0.885149 0.8548669 0.7361657 0.8154360 4 0.861287 0.8782772 -0.01730550 5 0.7062694 0.8283499 -0.12208054 0.9405514 5.2345e-02 insignificant 1.00000 6.7108e-01 insignificant 0.8448080 2.1048e-01 insignificant 1.00000 1.0000e+00 insignificant -0.00448603 0.8567203 insignificant 1.00000 insignificant 0.862496 0.9362934 -7.3495e-02 5 0.8778864 0.9028347 -0.02494827 9.9522e-01 6.9369e-07 weaklyHypometh 1.0000e+00 3.1531e-05 weaklyHypometh 9.9814e-01 2.2731e-03 weaklyHypometh 1.0000e+00 6.6855e-02 weaklyHypometh -0.06388283 5.2410e-02 insignificant 2.7730e-01 insignificant 0.861808 0.8388278 0.02685612 5 0.7945531 0.7931277 0.0014253 1.8823e-01 9.2274e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.8796e-01 9.7770e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01873975 5.0756e-01 insignificant 1.0000e+00 insignificant 0.8790588 0.9370765 -0.0572792 5 0.8711438 0.9365730 -0.0654292 9.9966e-01 9.3902e-05 weaklyHypometh 1.0000e+00 4.4715e-03 weaklyHypometh 9.9837e-01 2.2020e-03 weaklyHypometh 1.0000e+00 1.0009e-01 insignificant -0.05939680 8.5829e-02 insignificant 3.9371e-01 insignificant 0.8783466 0.8388278 0.04295527 5 0.8247508 0.7931277 0.03162310 3.2894e-02 9.7260e-01 weaklyHypermeth 2.4919e-01 1.0000e+00 insignificant 2.1404e-01 9.7792e-01 insignificant 1.0000e+00 1.0000000 insignificant 2.3226e-02 4.5950e-01 insignificant 1.00000000 insignificant 0.9370765 0.8394495 0.1026122 5 0.9365730 0.8350031 0.1015698 1.5937e-05 1.0000e+00 weaklyHypermeth 7.5888e-04 1.0000e+00 weaklyHypermeth 3.1183e-03 9.9997e-01 weaklyHypermeth 1.4174e-01 1.0000e+00 insignificant 0.0826226 3.5795e-02 weaklyHypermeth 2.0338e-01 insignificant chr17 17530750 17531750 49995 RAI1 ENSG00000108557 0.817751 205 6 0.625064 173 7 0.726474 112 6 0.828128 143 6 0.6391053 77 6 0.767602 305 6 0.695840 145 6 0.742382 159 6 0.6451915 119 6 0.799490 99 6 0.773082 217 7 0.699110 83 6 0.7819413 136 6 0.6333333 11 1 0.7865649 132 6 0.5480726 47 6 0.662580 268 6 0.876664 157 6 0.765368 118 6 0.7928746 276 6 0.711161 93 3 0.688070 104 5 0.724004 133 6 0.723016 73 3 0.866787 86 6 0.7644108 123 6 0.5607639 83 3 0.749587 84 3 0.675602 101 6 0.7277133 183 7 0.706665 142 7 0.797498 368 6 0.6179224 173 7 0.5882965 149 6 0.7476032 152 6 0.839127 61 5 0.539154 107 3 0.7070211 161 7 0.798883 170 6 0.7967839 198 6 0.8206511 165 6 0.7911450 177 6 0.822849 188 6 0.8536297 0.733713 0.7874037 0.841635 0.8127472 0.821922 0.751428 0.7545773 0.7905117 0.8709669 0.8178220 0.728015 0.8092400 0.773809 0.8057810 0.6258193 0.770523 0.885095 0.8093534 0.8192176 0.819564 0.810916 0.765914 0.8428655 0.9056088 0.7920686 0.710928 0.849320 0.773020 0.7949817 0.7865348 0.8141691 0.6853076 0.62873828 0.74700370 0.77188002 0.709289 0.7393652 0.8273129 0.868176 0.8786697 0.7936614 0.8430128 3 0.774983 0.7863954 0.00978237 6 0.7362748 0.7083148 0.02796001 0.2971629 8.8738e-01 insignificant 1.00000 1.0000e+00 insignificant 0.7970544 6.6155e-01 insignificant 1.00000 1.0000e+00 insignificant 0.00572433 0.8409770 insignificant 1.00000 insignificant 0.774983 0.6986301 8.2226e-02 6 0.7362748 0.6542762 0.08199859 5.2958e-04 9.9971e-01 weaklyHypermeth 2.6347e-03 1.0000e+00 weaklyHypermeth 6.2743e-02 9.4628e-01 insignificant 2.8010e-01 1.0000e+00 insignificant 0.05714352 2.8586e-01 insignificant 1.0000e+00 insignificant 0.774983 0.8028953 -0.04019691 6 0.7362748 0.8171601 -0.0808852 9.9765e-01 2.1211e-02 weaklyHypometh 1.0000e+00 3.6662e-01 insignificant 9.9783e-01 1.5695e-02 weaklyHypometh 1.0000e+00 3.7368e-01 insignificant -0.07573145 9.3457e-04 weaklyHypometh 4.2481e-02 weaklyHypometh 0.7863954 0.6986301 0.0758630 6 0.7083148 0.6542762 0.0540386 5.0135e-03 9.8091e-01 weaklyHypermeth 2.2584e-02 1.0000e+00 weaklyHypermeth 1.7975e-02 9.7737e-01 weaklyHypermeth 9.2880e-02 1.0000e+00 weaklyHypermeth 0.05141920 3.3943e-01 insignificant 1.0000e+00 insignificant 0.7863954 0.8028953 -0.05075312 6 0.7083148 0.8171601 -0.10884524 9.9994e-01 6.4781e-03 weaklyHypometh 1.0000e+00 2.3136e-01 insignificant 9.9803e-01 4.4450e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant -8.1456e-02 2.7827e-03 weaklyHypometh 0.13913731 insignificant 0.6986301 0.8028953 -0.1227080 6 0.6542762 0.8171601 -0.1628838 1.0000e+00 1.7298e-04 weaklyHypometh 1.0000e+00 1.2626e-03 weaklyHypometh 9.9996e-01 1.3251e-03 weaklyHypometh 1.0000e+00 1.2157e-02 weaklyHypometh -0.1328750 3.2894e-02 weaklyHypometh 1.9125e-01 insignificant chr17 17555450 17556450 49997 RAI1 ENSG00000108557 0.178472 351 7 0.117585 255 7 0.210481 244 7 0.291986 275 7 0.0708639 147 7 0.136723 356 7 0.138102 233 7 0.094093 270 7 0.0970000 245 7 0.078787 229 7 0.212267 265 7 0.261654 123 7 0.0323013 282 7 NA 0 0 0.1013242 272 7 0.2362637 59 7 0.110600 212 7 0.135567 329 7 0.041166 312 7 0.0588039 358 7 0.142388 136 7 0.045440 222 7 0.112118 329 7 0.095996 129 7 0.030839 152 7 0.0727183 339 7 0.0969244 189 7 0.033613 57 5 0.114996 256 7 0.0875503 383 7 0.020897 518 7 0.174395 377 7 0.4803740 176 7 0.5808358 166 7 0.8317451 154 5 0.212621 105 5 0.634055 74 7 0.1352845 412 7 0.079941 415 7 0.1768710 368 7 0.1413546 280 7 0.0833491 333 7 0.255217 363 7 0.1948293 0.128489 0.2269476 0.175609 0.0782705 0.137246 0.155340 0.1064342 0.0808441 0.0653167 0.2171035 0.278220 0.0325766 NA 0.1049734 0.2019035 0.117722 0.136528 0.0366585 0.0545221 0.156954 0.041831 0.124016 0.1251414 0.0350661 0.0772124 0.108861 0.072841 0.113924 0.0803203 0.0284974 0.1681607 0.4040024 0.51161703 0.84328374 0.15149141 0.603267 0.1191942 0.0661251 0.124184 0.1138382 0.0711402 0.1321384 7 0.126220 0.0975373 0.02810060 7 0.2347561 0.0821481 0.15260803 0.0191976 9.8168e-01 weaklyHypermeth 1.00000 1.0000e+00 insignificant 0.0008861 9.9951e-01 weaklyHypermeth 0.88610 1.0000e+00 insignificant 0.05139853 0.0266700 weaklyHypermeth 1.00000 insignificant 0.126038 0.3854646 -2.5740e-01 7 0.1254356 0.4007724 -0.27533684 1.0000e+00 2.8869e-13 hypomethylated 1.0000e+00 2.6244e-11 hypomethylated 1.0000e+00 1.8659e-06 hypomethylated 1.0000e+00 1.5549e-04 hypomethylated -0.34209774 2.4059e-02 weaklyHypometh 1.4943e-01 insignificant 0.126220 0.1085844 0.01431337 7 0.2347561 0.1843365 0.0504196 1.1114e-01 3.7501e-01 insignificant 7.5095e-01 1.0000e+00 insignificant 3.2752e-01 3.4423e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01029172 7.8872e-01 insignificant 1.0000e+00 insignificant 0.0975689 0.3854646 -0.2826674 7 0.0938835 0.4007724 -0.3068889 1.0000e+00 2.2141e-11 hypomethylated 1.0000e+00 2.4601e-09 hypomethylated 1.0000e+00 2.5590e-08 hypomethylated 1.0000e+00 3.6557e-06 hypomethylated -0.39349627 1.4330e-02 weaklyHypometh 9.9515e-02 weaklyHypometh 0.0975373 0.1085844 -0.01063509 7 0.0821481 0.1843365 -0.10218839 4.9870e-01 2.1418e-03 weaklyHypometh 1.0000e+00 1.0199e-01 insignificant 8.7117e-01 5.6830e-03 weaklyHypometh 1.0000e+00 0.3931263 insignificant -6.1690e-02 1.3582e-01 insignificant 0.97715662 insignificant 0.3854646 0.1076310 0.2735696 7 0.4007724 0.1154322 0.2853402 7.0481e-05 1.0000e+00 hypermethylated 2.7108e-03 1.0000e+00 hypermethylated 7.6648e-05 1.0000e+00 hypermethylated 6.9680e-03 1.0000e+00 hypermethylated 0.3318060 2.6187e-02 weaklyHypermeth 1.6065e-01 insignificant chr17 17595950 17596950 50002 RAI1 ENSG00000108557 0.1609993 1722 40 0.0539776 1215 40 0.0949277 1657 42 0.1266998 1727 37 0.0590986 963 37 0.1258120 1838 43 0.0477367 1470 41 0.1283432 1316 41 0.11759100 2390 40 0.076341 2193 37 0.1352413 1217 41 0.0580318 1587 37 0.1299991 1798 40 0.0511021 782 29 0.1129702 1759 40 0.0416185 978 37 0.038033 1355 37 0.1244436 2215 39 0.0139356 1215 37 0.1182765 1558 44 0.106490 540 38 0.0799807 1415 40 0.1000851 1199 40 0.0684649 685 37 0.0506103 946 35 0.1268214 2012 43 0.1275742 997 41 0.1202345 801 36 0.1216436 1175 39 0.0929422 1803 43 0.1519454 2298 42 0.143804 1966 40 0.0257232 1103 43 0.05822272 709 37 0.0937012 667 27 0.0076655 521 35 0.0558852 764 39 0.0712547 1461 42 0.0609306 2092 40 0.1933211 1663 40 0.0580385 1487 36 0.0721193 1817 40 0.1281893 1724 40 0.0552723 0.0270741 0.0403394 0.0533143 0.0565274 0.0616420 0.0142684 0.05176334 0.0328865 0.0386339 0.0557485 0.0312324 0.0496485 0.04084710 0.0414313 0.02427926 0.01578747 0.0443747 0.01928814 0.0428637 0.0689445 0.0424261 0.0433133 0.0398014 0.0416897 0.0420079 0.0404855 0.0582872 0.0624775 0.0522948 0.0474220 0.0486436 0.0106441 0.0148463 0.05146543 0.00179372 0.0372696 0.0158137 0.0381659 0.0770176 0.0313513 0.0274349 0.0731386 36 0.0454296 0.0660771 -0.00868052 38 0.110308 0.109711 0.00059777 0.6586946 2.8668e-01 insignificant 1.00000 1.000000 insignificant 0.710799 6.0191e-01 insignificant 1 1.000000 insignificant -0.0167908 0.20281890 insignificant 1.00000 insignificant 0.0454296 0.0300536 0.04559703 38 0.110308 0.0652575 0.04505085 7.4792e-08 9.9992e-01 weaklyHypermeth 1.2261e-06 1.0000e+00 weaklyHypermeth 6.3513e-08 1.0000e+00 weaklyHypermeth 1.7643e-06 1.0000e+00 weaklyHypermeth 0.03868345 3.1973e-02 weaklyHypermeth 3.8063e-01 insignificant 0.0453576 0.0471472 -0.01023149 38 0.111602 0.120502 -0.0089002 9.9949e-01 4.2497e-12 weaklyHypometh 1.0000e+00 4.2497e-09 weaklyHypometh 9.9817e-01 1.0597e-06 weaklyHypometh 1.0000e+00 0.00052987 weaklyHypometh -0.01176089 6.8811e-01 insignificant 1.0000e+00 insignificant 0.0661319 0.0302392 0.0602823 41 0.117676 0.0843339 0.0333418 6.7766e-09 9.9993e-01 weaklyHypermeth 1.3553e-07 1.0000e+00 weaklyHypermeth 1.8876e-06 1.0000e+00 weaklyHypermeth 5.3932e-05 1.0000e+00 weaklyHypermeth 0.0554742 4.9390e-03 weaklyHypermeth 8.8197e-02 weaklyHypermeth 0.066148 0.0471472 -0.00394259 40 0.1170247 0.120502 -0.00347720 9.9554e-01 6.2765e-06 weaklyHypometh 1.0000e+00 0.00125531 weaklyHypometh 9.9389e-01 7.6712e-04 weaklyHypometh 1.0000e+00 0.2557080 insignificant 0.00502989 8.6195e-01 insignificant 1.00000000 insignificant 0.0299080 0.0471472 -0.05557887 40 0.0584969 0.120502 -6.2005e-02 1.0000e+00 7.5041e-11 weaklyHypometh 1.0000e+00 3.1267e-09 weaklyHypometh 1.0000e+00 2.3178e-08 weaklyHypometh 1.0000e+00 7.7261e-06 weaklyHypometh -0.0504443 1.3312e-01 insignificant 1.0000e+00 insignificant chr17 17662850 17663850 50003 SREBF1 ENSG00000072310 0.9195864 506 14 0.7037678 342 12 0.7882415 338 14 0.8603146 458 13 0.9205543 251 13 0.8597557 725 14 0.8146693 380 14 0.8479919 378 14 0.89979696 261 14 0.932862 307 14 0.9147552 590 14 0.9265873 128 11 0.7831494 231 13 0.9150536 240 13 0.8469130 280 14 0.8285714 164 9 0.750000 300 3 0.8993096 732 13 0.7552917 758 14 0.8439026 657 14 0.885825 191 14 0.7850000 98 8 0.8644492 388 13 0.8272435 223 14 0.6472562 135 6 0.8829452 516 14 0.8144815 449 14 0.6867434 210 14 0.8425914 556 14 0.8855875 467 14 0.8203670 633 14 0.867779 699 14 0.7159564 292 14 0.83746257 400 14 0.7665161 353 10 0.8211742 92 5 0.5842430 337 14 0.9556671 625 14 0.8168453 567 14 0.8812921 522 14 0.9383955 245 12 0.9095335 719 9 0.7578088 332 13 0.9192736 0.8079504 0.8367597 0.9254910 0.8978972 0.8992919 0.8901142 0.88576180 0.8853830 0.9337057 0.8923123 0.8962009 0.7167474 0.89627464 0.8994534 0.93995447 0.93049195 0.8281415 0.75847156 0.8845411 0.9601363 0.9139603 0.9297850 0.8230049 0.8617503 0.8577993 0.9050109 0.9148540 0.8657053 0.8419120 0.7325847 0.9421358 0.7232830 0.8462680 0.77395587 0.72584263 0.7517351 0.9518065 0.9293557 0.8956246 0.9002457 0.8890968 0.8046554 6 0.8845962 0.8854075 0.00313241 14 0.675398 0.669863 0.00553495 0.9557217 7.8177e-01 insignificant 1.00000 1.000000 insignificant 0.898246 8.4794e-01 insignificant 1 1.000000 insignificant 0.0330313 0.23490574 insignificant 1.00000 insignificant 0.8847208 0.8199142 0.06523480 14 0.720853 0.6382229 0.08262967 5.9681e-03 7.6073e-01 weaklyHypermeth 4.2327e-02 1.0000e+00 weaklyHypermeth 2.2849e-01 9.5405e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.07038381 2.3575e-01 insignificant 1.0000e+00 insignificant 0.8849271 0.8893082 -0.01033814 13 0.739306 0.804152 -0.0648460 9.3226e-01 8.1995e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7454e-01 8.3202e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.01022131 7.8623e-01 insignificant 1.0000e+00 insignificant 0.8856016 0.8206962 0.0606453 14 0.701761 0.6686145 0.0331469 5.4691e-02 8.6670e-01 insignificant 3.2946e-01 1.0000e+00 insignificant 2.5751e-01 9.0394e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0373525 5.2495e-01 insignificant 1.0000e+00 insignificant 0.885577 0.8892617 -0.01090377 13 0.6868494 0.794359 -0.10751012 8.3545e-01 9.4280e-01 insignificant 1.0000e+00 1.00000000 insignificant 9.3695e-01 8.1721e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.04325262 3.0669e-01 insignificant 1.00000000 insignificant 0.8206107 0.8892617 -0.07378489 13 0.6520452 0.794359 -1.4231e-01 9.6534e-01 6.2439e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8551e-01 4.2862e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0806051 2.1987e-01 insignificant 1.0000e+00 insignificant chr17 17684150 17685150 50004 SREBF1 ENSG00000072310 0.0343377 1088 42 0.0333363 1495 43 0.1143439 1735 43 0.0527788 789 27 0.0334065 1226 37 0.0607219 1159 41 0.0277911 1735 37 0.0463395 929 37 0.03036995 1096 37 0.032587 1000 34 0.0476814 1307 37 0.0341162 1407 34 0.0407038 1106 37 0.0944368 103 7 0.0420851 1453 37 0.0229697 1790 31 0.014990 1288 31 0.0203087 1233 27 0.0263445 1608 37 0.0458448 1057 40 0.012445 536 30 0.0583649 238 17 0.0702322 1322 43 0.0253416 486 35 0.0351191 345 14 0.0266113 1696 43 0.0491627 698 36 0.0560490 472 36 0.0552438 690 37 0.0189430 1802 43 0.0257812 2557 43 0.038211 1207 42 0.0060607 1294 43 0.00412082 1082 37 0.0050536 917 28 0.0200877 247 16 0.0523719 459 31 0.0337660 1167 43 0.0945425 1017 35 0.0657472 998 36 0.0359375 762 29 0.0469050 1004 23 0.0651772 990 34 0.0413574 0.0396284 0.0727054 0.0550033 0.0348616 0.0782604 0.0320647 0.05135315 0.0331697 0.0391076 0.0578074 0.0376351 0.0463623 NA 0.0510637 0.02561830 0.04448313 0.0269891 0.03215414 0.0461974 0.0047790 0.0473526 0.0720407 0.0340142 0.0388982 0.0317526 0.0510896 0.0636263 0.0657707 0.0190450 0.0326328 0.0480608 0.0047136 0.0028184 0.00745282 0.01263210 0.0214873 0.0122011 0.0958777 0.0713096 0.0426902 0.0582120 0.0579286 15 0.0501179 0.0422442 0.00701048 43 0.061729 0.037662 0.02406695 0.0036526 9.6369e-01 weaklyHypermeth 0.91314 1.000000 insignificant 0.030513 9.7139e-01 weaklyHypermeth 1 1.000000 insignificant 0.0034825 0.64693981 insignificant 1.00000 insignificant 0.0500894 0.0085189 0.04892567 43 0.058917 0.0461136 0.01280292 1.3263e-11 9.9752e-01 weaklyHypermeth 2.8834e-10 1.0000e+00 weaklyHypermeth 4.7163e-07 9.9999e-01 weaklyHypermeth 1.1503e-05 1.0000e+00 weaklyHypermeth 0.02253121 4.1070e-02 weaklyHypermeth 4.7207e-01 insignificant 0.0501260 0.1236638 -0.03510256 33 0.064472 0.073728 -0.0092564 5.1180e-01 2.4581e-08 weaklyHypometh 1.0000e+00 4.9163e-06 weaklyHypometh 7.2909e-01 1.6251e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.01888722 1.4249e-01 insignificant 1.0000e+00 insignificant 0.0422547 0.0085189 0.0392282 43 0.039336 0.0461136 -0.0067781 9.1776e-05 9.9770e-01 weaklyHypermeth 1.0549e-03 1.0000e+00 weaklyHypermeth 2.2106e-03 1.0000e+00 weaklyHypermeth 2.6634e-02 1.0000e+00 weaklyHypermeth 0.0190487 7.5597e-02 insignificant 6.4613e-01 insignificant 0.042179 0.1236638 -0.04032531 33 0.0319281 0.073728 -0.04180039 9.9670e-01 7.6277e-07 weaklyHypometh 1.0000e+00 0.00038138 weaklyHypometh 9.9499e-01 6.8390e-02 insignificant 1.0000e+00 1.0000000 insignificant -0.02236976 9.1827e-02 insignificant 1.00000000 insignificant 0.0083269 0.1236897 -0.10310542 33 0.0244344 0.075404 -5.0970e-02 1.0000e+00 2.9230e-09 weaklyHypometh 1.0000e+00 9.7433e-08 weaklyHypometh 1.0000e+00 5.9005e-03 weaklyHypometh 1.0000e+00 8.3106e-02 weaklyHypometh -0.0414184 1.1618e-02 weaklyHypometh 2.0031e-01 insignificant chr17 17834350 17835350 50022 ENSG00000216634 0.6834299 110 6 0.6380952 58 2 0.6904762 42 2 0.6885522 106 6 0.8541667 48 2 0.5604388 160 6 0.6966374 39 2 0.9217105 78 2 0.76923077 55 2 0.950000 22 2 0.6811575 90 2 0.9444444 18 2 0.5830065 33 2 0.9666667 29 2 0.5128205 27 2 0.8333333 18 2 0.484836 308 5 0.5144485 128 7 0.6985443 135 6 0.5486092 184 6 0.891667 19 2 0.9090909 20 2 0.6197153 107 6 0.8810526 44 2 0.8095238 15 2 0.5031527 144 6 0.7784314 32 2 0.5208333 32 2 0.8967320 33 2 0.4404326 147 6 0.5215894 188 6 0.643372 144 6 0.4292929 25 2 0.50952381 14 2 0.2675481 60 5 0.6833333 15 0 0.5026395 73 2 0.5261455 183 6 0.6261216 141 6 0.6402642 128 6 0.7292735 79 6 0.6805556 65 6 0.6478191 123 6 0.9018288 0.6375661 0.6931217 0.9592218 0.8472222 0.8374257 0.8989604 0.92763158 0.9188034 0.9000000 0.8646934 0.9382716 0.8736383 0.96296296 0.7692308 0.81481481 0.77777778 0.7555556 0.89153439 0.8625600 0.8333333 0.8989899 0.9108476 0.8853801 0.7301587 0.8110288 0.7834423 0.9185185 0.8427015 0.9006410 0.9432099 0.9429526 0.4006734 0.5238095 0.22222222 0.71210851 0.5094687 0.5201709 0.8641975 0.9014161 0.9572650 1.0000000 0.9560811 2 0.7064057 0.7189189 -0.00752655 6 0.675637 0.527973 0.14766436 0.1323041 9.1144e-01 insignificant 1.00000 1.000000 insignificant 0.469088 9.9424e-01 insignificant 1 1.000000 insignificant 0.0097308 0.87717391 lowCoverage 1.00000 lowCoverage 0.7064057 0.4810811 0.23515506 3 0.675637 0.5082221 0.16741517 1.8247e-09 9.9934e-01 lowCoverage 3.2013e-08 1.0000e+00 lowCoverage 1.9570e-02 9.9647e-01 lowCoverage 1.8462e-01 1.0000e+00 lowCoverage 0.22461636 7.1240e-03 lowCoverage 1.2321e-01 lowCoverage 0.7057075 0.6902985 -0.05619139 6 0.603557 0.693556 -0.0899994 9.9274e-01 1.7893e-02 weaklyHypometh 1.0000e+00 4.1612e-01 insignificant 9.9343e-01 4.2575e-02 weaklyHypometh 1.0000e+00 0.90585383 insignificant 0.04622343 2.5371e-01 lowCoverage 1.0000e+00 lowCoverage 0.7189189 0.4810811 0.2297739 3 0.527973 0.5082221 0.0197508 7.8211e-09 7.4873e-01 lowCoverage 1.5335e-07 1.0000e+00 lowCoverage 1.2191e-01 9.0045e-01 lowCoverage 8.2001e-01 1.0000e+00 lowCoverage 0.2148855 1.3977e-02 lowCoverage 1.9451e-01 lowCoverage 0.720829 0.6902985 -0.05666357 6 0.5341891 0.693556 -0.15936691 9.9795e-01 1.8790e-02 weaklyHypometh 1.0000e+00 0.69594330 insignificant 9.9991e-01 2.9265e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant 0.03649258 5.1582e-01 lowCoverage 1.00000000 lowCoverage 0.4836066 0.6902985 -0.29177300 3 0.5100492 0.693556 -1.8351e-01 9.9914e-01 1.4347e-07 lowCoverage 1.0000e+00 3.4160e-06 lowCoverage 9.9100e-01 4.4089e-02 lowCoverage 1.0000e+00 4.0081e-01 lowCoverage -0.1783929 2.2123e-02 lowCoverage 3.1424e-01 lowCoverage chr17 18002050 18003050 50025 MYO15A ENSG00000091536 0.1777963 523 9 0.0906271 400 12 0.0926923 415 9 0.1413289 574 12 0.1184171 291 9 0.1228279 745 12 0.1222027 340 9 0.1070228 440 9 0.15930497 511 9 0.149003 587 7 0.0984918 415 12 0.1743546 374 7 0.4273145 364 8 0.0896760 344 8 0.2072811 478 8 0.1839323 480 8 0.067815 160 7 0.1960009 865 9 0.2819263 498 9 0.1401697 592 9 0.111395 157 12 0.1242919 389 8 0.2934004 397 9 0.1162441 322 12 0.1143382 572 12 0.1648462 450 12 0.1061141 462 8 0.1486661 246 9 0.1171150 318 9 0.1316192 453 12 0.1105416 702 12 0.120917 509 9 0.1294332 319 12 0.11254902 309 7 0.3333333 227 7 0.1008772 118 6 0.1006663 286 12 0.1999039 531 12 0.1971406 482 9 0.2332164 473 9 0.1383029 496 12 0.2341400 641 9 0.1618000 424 9 0.0490111 0.0185411 0.0234544 0.0623621 0.0714156 0.0380168 0.0677642 0.05507330 0.0325865 0.0507664 0.0341900 0.0402071 0.2740804 0.03690546 0.1089514 0.03949155 0.12364227 0.0553520 0.12073746 0.0545854 0.0303313 0.0617001 0.0383011 0.0238096 0.0587389 0.0527876 0.0310126 0.0360095 0.0271612 0.0458244 0.0500416 0.0272262 0.0781409 0.0456753 0.04090239 0.01686826 0.0967294 0.1233697 0.1561278 0.0861403 0.0475733 0.1012368 0.0832349 7 0.0965613 0.1017290 0.01986907 9 0.127584 0.108488 0.01909591 0.2111819 9.9990e-01 insignificant 1.00000 1.000000 insignificant 0.195563 9.9964e-01 insignificant 1 1.000000 insignificant 0.0191186 0.42291584 insignificant 1.00000 insignificant 0.0967054 0.1587479 -0.00326846 9 0.120079 0.1286506 -0.00857139 9.3593e-01 8.3095e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.3886e-01 9.9255e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00538454 9.0020e-01 insignificant 1.0000e+00 insignificant 0.0969017 0.1478537 -0.02971044 9 0.207035 0.224965 -0.0179299 9.6359e-01 3.0004e-02 weaklyHypometh 1.0000e+00 6.3839e-01 insignificant 9.5378e-01 1.4518e-03 weaklyHypometh 1.0000e+00 0.12098437 insignificant -0.03551071 2.0213e-01 insignificant 1.0000e+00 insignificant 0.1018314 0.1589256 -0.0270328 12 0.115721 0.1458040 -0.0300832 7.0205e-01 2.1996e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.9216e-01 7.6352e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0245032 5.6242e-01 insignificant 1.0000e+00 insignificant 0.102140 0.1479125 -0.05043447 9 0.1335239 0.242270 -0.10874587 8.8595e-01 2.5413e-06 weaklyHypometh 1.0000e+00 0.00063532 weaklyHypometh 9.5703e-01 1.8177e-05 weaklyHypometh 1.0000e+00 0.0090886 weaklyHypometh -0.05462935 5.0264e-02 insignificant 1.00000000 insignificant 0.1595506 0.1479125 -0.02515400 9 0.1682353 0.242270 -7.4034e-02 8.0833e-01 2.0010e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.1730e-01 2.6821e-02 weaklyHypometh 1.0000e+00 2.6821e-01 insignificant -0.0301262 4.9466e-01 insignificant 1.0000e+00 insignificant chr17 18032950 18033950 50027 ALKBH5 ENSG00000091542 0.8413782 230 11 0.7618063 237 14 0.7792791 148 11 0.7425503 197 14 0.7327171 134 14 0.8193595 361 14 0.7861983 118 11 0.8448798 261 14 0.80435233 185 13 0.817837 177 12 0.8198630 375 14 0.7778053 98 8 0.8548459 205 12 0.8076752 143 13 0.8756105 157 11 0.8115530 43 4 0.799091 159 7 0.7704281 204 14 0.8413096 185 12 0.7620582 266 9 0.864583 80 4 0.8298611 81 6 0.7804688 198 12 0.8576133 81 6 0.8153886 147 11 0.9055564 331 12 0.8222052 162 11 0.4922222 51 5 0.8618026 133 12 0.8126232 294 12 0.8560113 299 12 0.862004 334 9 0.7598034 217 14 0.76975063 164 14 0.7760543 271 13 0.7860750 51 5 0.5727988 159 11 0.8684069 263 12 0.7765523 137 11 0.8686674 284 14 0.7176814 216 14 0.7970987 111 5 0.8334255 175 11 0.8602491 0.8451020 0.8473593 0.8433484 0.8719106 0.8594692 0.8225949 0.87954164 0.8598114 0.8834911 0.8772360 0.7923261 0.8798147 0.85224391 0.8933102 0.85923138 0.86384051 0.8982363 0.86769973 0.8414300 0.9367560 0.8609610 0.8382818 0.8402240 0.8244589 0.9100464 0.8539311 0.6975327 0.9051272 0.8949808 0.9089083 0.8950834 0.7322508 0.8133796 0.84320704 0.83805311 0.7188348 0.8674734 0.8327432 0.9102667 0.7670219 0.8338979 0.8904182 3 0.8536837 0.8840712 -0.01179421 12 0.716461 0.789374 -0.07291268 0.9401918 2.7256e-01 insignificant 1.00000 1.000000 insignificant 0.820110 4.3171e-02 weaklyHypometh 1 1.000000 insignificant -0.0108318 0.73934648 insignificant 1.00000 insignificant 0.8536837 0.7742222 0.07172170 12 0.716461 0.7169120 -0.00045111 1.9469e-05 9.9840e-01 weaklyHypermeth 2.2123e-04 1.0000e+00 weaklyHypermeth 9.2361e-02 9.9195e-01 insignificant 6.5043e-01 1.0000e+00 insignificant 0.04704838 2.9664e-01 insignificant 1.0000e+00 insignificant 0.8545642 0.8591549 0.00880951 13 0.818812 0.807352 0.0114602 3.4977e-01 1.2649e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.6788e-01 1.1860e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.00384484 8.9259e-01 insignificant 1.0000e+00 insignificant 0.8840712 0.7742222 0.0918264 12 0.789374 0.7169120 0.0724616 1.5791e-04 9.9567e-01 weaklyHypermeth 1.7353e-03 1.0000e+00 weaklyHypermeth 1.8748e-02 9.8581e-01 weaklyHypermeth 1.6348e-01 1.0000e+00 insignificant 0.0578801 2.7449e-01 insignificant 1.0000e+00 insignificant 0.884774 0.8591549 0.01708847 11 0.8307127 0.807352 0.02336042 2.6443e-01 6.7577e-01 insignificant 1.0000e+00 1.00000000 insignificant 1.3990e-01 2.0629e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.01467660 7.1924e-01 insignificant 1.00000000 insignificant 0.7747106 0.8591549 -0.09711503 11 0.7478994 0.807352 -5.9453e-02 8.7378e-01 1.8092e-02 weaklyHypometh 1.0000e+00 1.3917e-01 insignificant 9.5906e-01 5.1714e-02 insignificant 1.0000e+00 4.4726e-01 insignificant -0.0432035 3.8810e-01 insignificant 1.0000e+00 insignificant chr17 18825450 18826450 50039 SLC5A10 ENSG00000154025 0.9018104 490 8 0.6416800 114 7 0.5082094 94 7 0.9197922 325 9 0.8404762 87 6 0.7160409 339 9 0.8430736 46 5 0.7535596 201 9 0.85897436 80 6 0.820000 125 7 0.8257620 329 9 0.8503401 34 4 0.7381026 133 6 0.9654321 118 6 0.8274603 112 5 0.8362573 73 4 NA 0 0 0.5930612 1160 8 0.6616071 477 9 0.7333902 249 9 0.958995 120 9 0.8624598 174 6 0.6504884 140 7 0.6133598 86 8 0.8592698 459 9 0.8738121 241 9 0.6689436 250 9 1.0000000 35 5 0.8927418 455 9 0.7323047 202 9 0.7503334 310 9 0.823490 284 9 0.2675284 180 9 0.42488650 414 9 0.4271646 307 6 0.2252101 65 3 0.3828866 117 8 0.3165919 466 9 0.6097013 183 9 0.5615471 265 9 0.7991182 220 8 0.8159101 407 6 0.6430998 295 9 0.9086519 0.7569523 0.4701743 0.9228693 0.9376661 0.8381154 0.9212140 0.86526497 0.8878618 0.8682403 0.9446753 0.7878602 0.6893628 0.94020029 0.8933374 0.82060010 NA 0.5542617 0.78822467 0.8773903 0.9964235 0.7673320 0.9521967 0.5540211 0.8460809 0.8617909 0.7903194 1.0000000 0.8829597 0.8477985 0.8778186 0.8953299 0.1265947 0.1083302 0.21522337 0.07594042 0.1669697 0.1255179 0.7733675 0.6429912 0.8618080 0.7847580 0.7673842 5 0.7784079 0.8503451 -0.07667791 9 0.606240 0.647438 -0.04119866 0.9999997 5.5174e-02 insignificant 1.00000 1.000000 insignificant 0.993246 9.6477e-01 insignificant 1 1.000000 insignificant -0.0263922 0.56062823 insignificant 1.00000 insignificant 0.7785293 0.2399741 0.57348898 9 0.619520 0.4326302 0.18688964 1.3183e-30 1.0000e+00 hypermethylated 8.2396e-29 1.0000e+00 hypermethylated 1.5349e-12 1.0000e+00 hypermethylated 1.2791e-10 1.0000e+00 hypermethylated 0.44007968 4.0139e-07 hypermethylated 2.3611e-05 hypermethylated 0.7807979 0.7598540 0.02667570 9 0.786554 0.653443 0.1331107 4.4812e-07 7.2292e-01 weaklyHypermeth 3.8678e-05 1.0000e+00 weaklyHypermeth 1.8908e-05 9.9704e-01 weaklyHypermeth 2.1119e-03 1.00000000 weaklyHypermeth 0.09491573 1.4989e-01 insignificant 1.0000e+00 insignificant 0.8502907 0.2408005 0.6159973 9 0.626700 0.4463970 0.1803026 3.0755e-43 1.0000e+00 hypermethylated 6.1509e-41 1.0000e+00 hypermethylated 1.9668e-10 1.0000e+00 hypermethylated 1.5130e-08 1.0000e+00 hypermethylated 0.4664718 1.8715e-07 hypermethylated 1.3368e-05 hypermethylated 0.852609 0.7598540 0.12108245 9 0.8504325 0.653443 0.19698952 1.5801e-11 9.8549e-01 weaklyHypermeth 2.2572e-09 1.00000000 weaklyHypermeth 2.5502e-05 9.9802e-01 weaklyHypermeth 2.8335e-03 1.0000000 weaklyHypermeth 0.12130791 8.8042e-02 insignificant 1.00000000 insignificant 0.2376302 0.7598540 -0.53944540 9 0.3246758 0.653443 -3.2877e-01 7.4315e-01 3.1024e-22 hypomethylated 1.0000e+00 1.0341e-19 hypomethylated 9.5922e-01 3.1538e-05 hypomethylated 1.0000e+00 1.1805e-03 hypomethylated -0.3451639 7.4439e-04 hypomethylated 3.0153e-02 hypomethylated chr17 18881850 18882850 50041 ENSG00000214848 0.8257970 457 10 0.8309432 564 11 0.6679101 526 14 0.7824198 599 10 0.7412714 245 11 0.9211630 563 14 0.8191732 410 13 0.8364488 572 9 0.81260411 404 9 0.908589 424 10 0.8106681 543 14 0.6431402 250 9 0.6976213 363 10 0.8140611 324 6 0.7836873 417 10 0.8366234 128 9 0.852976 66 6 0.6719781 548 10 0.8450883 819 10 0.8691450 249 9 0.677093 123 9 0.7488421 150 9 0.8573184 230 10 0.7799969 151 8 0.7983324 134 9 0.8403154 870 12 0.8660093 368 12 0.7458956 167 9 0.7341352 628 12 0.8348838 949 14 0.8416849 1076 14 0.880911 521 12 0.4088348 351 14 0.37532051 348 12 0.4428134 416 11 0.4747354 74 4 0.3806337 326 14 0.4761550 876 12 0.7441045 425 12 0.6939094 314 12 0.6836999 344 10 0.6987042 325 10 0.6006411 386 12 0.8891867 0.8388100 0.7661047 0.8865397 0.8218174 0.9287270 0.8885754 0.89730210 0.8635291 0.9107520 0.8957305 0.7897376 0.7791532 0.90869155 0.8681461 0.92221452 0.87669036 0.6795589 0.91855256 0.9333685 0.8888818 0.7416492 0.9089901 0.8775014 0.8797029 0.8747410 0.9177325 0.8873929 0.9048521 0.8826128 0.9058103 0.8938408 0.5345707 0.3315503 0.51445157 0.49261635 0.5536154 0.6058138 0.8435980 0.7054846 0.7786246 0.7838746 0.7328460 9 0.8527919 0.8769804 -0.02651921 10 0.707810 0.716525 -0.00871526 0.9871463 2.5107e-02 weaklyHypometh 1.00000 0.977643 insignificant 0.835508 1.2086e-01 insignificant 1 1.000000 insignificant -0.0018861 0.94088237 insignificant 1.00000 insignificant 0.8529585 0.4652720 0.32803069 10 0.720798 0.3826270 0.33817113 1.9661e-49 1.0000e+00 hypermethylated 9.8307e-47 1.0000e+00 hypermethylated 7.3781e-20 1.0000e+00 hypermethylated 2.4594e-17 1.0000e+00 hypermethylated 0.37214996 2.9566e-10 hypermethylated 3.2311e-08 hypermethylated 0.8530593 0.7255996 0.10192123 10 0.768851 0.686869 0.0819827 5.5558e-06 8.3353e-01 weaklyHypermeth 3.9684e-04 1.0000e+00 weaklyHypermeth 1.3126e-05 9.2155e-01 weaklyHypermeth 2.1119e-03 1.00000000 weaklyHypermeth 0.11435360 3.3849e-03 weaklyHypermeth 1.5386e-01 insignificant 0.8776119 0.4650774 0.3586004 11 0.706721 0.3601196 0.3466018 1.2357e-44 1.0000e+00 hypermethylated 3.0892e-42 1.0000e+00 hypermethylated 7.2580e-16 1.0000e+00 hypermethylated 2.4193e-13 1.0000e+00 hypermethylated 0.3740360 1.0976e-09 hypermethylated 1.0976e-07 hypermethylated 0.878126 0.7257525 0.13043029 11 0.8133915 0.706439 0.10695207 3.9746e-13 9.8316e-01 weaklyHypermeth 7.9492e-11 1.00000000 weaklyHypermeth 2.4246e-08 9.3788e-01 weaklyHypermeth 6.0616e-06 1.0000000 weaklyHypermeth 0.11623968 3.3724e-03 weaklyHypermeth 0.38891796 insignificant 0.4654667 0.7255996 -0.25764797 12 0.4081355 0.686869 -2.7873e-01 1.0000e+00 9.9861e-16 hypomethylated 1.0000e+00 1.4266e-13 hypomethylated 1.0000e+00 9.3744e-08 hypomethylated 1.0000e+00 1.8749e-05 hypomethylated -0.2577964 2.3540e-05 hypomethylated 3.3629e-03 hypomethylated chr17 18933050 18934050 50042 ENSG00000220838 0.0158730 364 16 0.0247912 424 19 0.0446558 661 20 0.0000000 375 10 0.0064608 446 15 0.0607625 528 18 0.0574146 569 15 0.0029412 417 15 0.00398727 667 15 0.030990 649 14 0.0546230 480 15 0.0016745 976 17 0.0398456 410 13 0.0018382 297 8 0.0092029 706 13 0.0041290 529 15 0.012568 377 16 0.0687721 370 12 0.0085709 466 12 0.0321558 268 9 0.020313 118 13 0.0421245 219 10 0.0235904 343 17 0.0321429 228 14 0.0882353 175 9 0.0057107 606 17 0.0138408 309 14 0.0112045 280 15 0.0123457 311 13 0.0087785 563 18 0.0409167 817 22 0.030080 478 19 0.0128630 374 17 0.00892221 291 12 0.0527778 339 18 0.0000000 106 4 0.1037281 151 15 0.0416667 300 19 0.1225052 364 14 0.0190074 224 11 0.0745098 229 5 0.0154095 280 8 0.0251553 350 16 0.0000000 0.0062269 0.0044164 0.0000000 0.0057980 0.0061940 0.0059374 0.00096322 0.0041815 0.0025734 0.0032636 0.0020167 0.0198419 0.00363514 0.0113062 0.00080091 0.01814730 0.0026383 0.01010000 0.0046448 0.0028459 0.0118091 0.0486645 0.0136728 0.0098898 0.0071466 0.0131864 0.0106747 0.0124538 0.0029439 0.0044220 0.0038608 0.0172334 0.0305666 0.00311345 0.00000000 0.0508173 0.0000000 0.0583417 0.0479087 0.0424779 0.0237754 0.0461930 5 0.0086181 0.0119181 -0.00232025 15 0.039459 0.030081 0.00937709 0.8293188 7.4894e-01 insignificant 1.00000 1.000000 insignificant 0.801157 9.0233e-01 insignificant 1 1.000000 insignificant -0.0033774 0.68864448 insignificant 1.00000 insignificant 0.0086181 0.0160154 -0.00588409 14 0.039459 0.0330507 0.00640785 5.0201e-01 4.8754e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 7.3663e-01 7.7279e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01259681 4.7583e-01 insignificant 1.0000e+00 insignificant 0.0084261 0.0414651 -0.03589329 8 0.032478 0.055872 -0.0233931 9.3393e-01 5.1343e-10 weaklyHypometh 1.0000e+00 1.2836e-07 weaklyHypometh 9.1757e-01 6.4981e-03 weaklyHypometh 1.0000e+00 0.32490320 insignificant -0.02725461 2.6440e-01 insignificant 1.0000e+00 insignificant 0.0119181 0.0160154 -0.0038693 17 0.030081 0.0330507 -0.0029692 8.6902e-01 5.1585e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.8179e-01 8.9752e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0092195 6.0665e-01 insignificant 1.0000e+00 insignificant 0.011709 0.0414651 -0.03334241 8 0.0241430 0.055872 -0.03172861 9.8333e-01 2.6651e-04 weaklyHypometh 1.0000e+00 0.03331347 weaklyHypometh 9.8439e-01 9.0417e-02 insignificant 1.0000e+00 1.0000000 insignificant -0.02387726 3.2460e-01 insignificant 1.00000000 insignificant 0.0154440 0.0414651 -0.02439273 7 0.0282765 0.055872 -2.7595e-02 9.9282e-01 4.3228e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9933e-01 8.0530e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0146578 5.8970e-01 insignificant 1.0000e+00 insignificant chr17 18979750 18980750 50045 GRAPL ENSG00000189152 0.7059754 506 10 0.7244850 474 11 0.6398336 617 14 0.8353399 604 10 0.7381715 280 11 0.8793495 577 10 0.7482546 405 13 0.8494653 568 12 0.71048241 485 11 0.767852 430 11 0.8667259 610 14 0.7644308 288 9 0.7398015 391 10 0.6620489 317 7 0.8110406 436 12 0.7872515 164 9 0.601880 92 6 0.5667229 482 10 0.7722612 857 10 0.8799301 299 12 0.829173 143 9 0.6651923 127 9 0.9217760 292 10 0.7592450 203 9 0.7247467 148 9 0.7103075 751 14 0.8828069 313 10 0.8305130 168 9 0.8791572 691 10 0.6830575 865 14 0.8375348 1191 14 0.824376 419 11 0.4297923 485 14 0.27707940 340 12 0.3972501 351 11 0.5575025 79 5 0.3484372 388 14 0.4895539 878 12 0.7813736 385 12 0.7220012 266 10 0.6782647 400 10 0.6208980 380 10 0.5540282 347 12 0.8736463 0.8242481 0.7746172 0.9189194 0.8374129 0.9431340 0.8364713 0.88711167 0.8283866 0.8778334 0.9230965 0.7861236 0.7694640 0.81492969 0.8670533 0.78047430 0.66962989 0.6291421 0.88054915 0.9259018 0.9205194 0.6641519 0.8978274 0.8978567 0.8842720 0.9044570 0.9111771 0.8882965 0.8914580 0.8652515 0.8980311 0.8973327 0.5683567 0.3031212 0.48476483 0.58877632 0.5911486 0.6304522 0.8417832 0.7418671 0.7259569 0.7877282 0.6694953 9 0.8368243 0.8737754 -0.03783011 10 0.725639 0.741874 -0.01623484 0.9617689 2.5484e-02 weaklyHypometh 1.00000 0.977643 insignificant 0.963921 1.0028e-02 weaklyHypometh 1 0.668565 insignificant -0.0430921 0.18374838 insignificant 1.00000 insignificant 0.8367485 0.4575397 0.30857649 10 0.713104 0.3433013 0.36980264 7.8750e-44 9.9934e-01 hypermethylated 1.3125e-41 1.0000e+00 hypermethylated 2.2490e-15 9.9704e-01 hypermethylated 3.7483e-13 1.0000e+00 hypermethylated 0.33596255 1.0162e-04 hypermethylated 3.0673e-03 hypermethylated 0.8369002 0.7114736 0.10288671 10 0.739742 0.628095 0.1116466 1.7978e-09 8.9661e-01 weaklyHypermeth 2.5683e-07 1.0000e+00 weaklyHypermeth 8.1173e-05 9.2282e-01 weaklyHypermeth 6.2441e-03 1.00000000 weaklyHypermeth 0.08125198 1.1345e-01 insignificant 1.0000e+00 insignificant 0.8736584 0.4575397 0.3509765 10 0.737696 0.3433013 0.3943948 9.7727e-40 9.9870e-01 hypermethylated 1.2216e-37 1.0000e+00 hypermethylated 1.4744e-14 9.9997e-01 hypermethylated 2.9487e-12 1.0000e+00 hypermethylated 0.3790546 2.7154e-05 hypermethylated 1.0057e-03 hypermethylated 0.874270 0.7114736 0.14358663 10 0.7882414 0.628095 0.16014616 2.0718e-14 9.6569e-01 weaklyHypermeth 6.9062e-12 1.00000000 weaklyHypermeth 5.5230e-06 9.6848e-01 weaklyHypermeth 6.9038e-04 1.0000000 weaklyHypermeth 0.12434404 3.0296e-02 weaklyHypermeth 0.81879976 insignificant 0.4579031 0.7114736 -0.23845976 10 0.3862140 0.628095 -2.4188e-01 9.9424e-01 5.4749e-11 hypomethylated 1.0000e+00 2.3804e-09 hypomethylated 9.9996e-01 1.6950e-05 hypomethylated 1.0000e+00 7.3694e-04 hypomethylated -0.2547106 1.5249e-03 weaklyHypometh 5.0830e-02 weaklyHypometh chr17 19006150 19007150 50049 ENSG00000197665 0.0038462 335 14 0.0541667 413 19 0.0128181 894 26 0.0125000 429 8 0.0043811 456 20 0.0836820 485 23 0.0052621 561 20 0.0460256 553 18 0.01678032 703 20 0.018791 829 20 0.0075758 517 21 0.0056140 1027 22 0.0163018 358 14 0.0023585 246 8 0.0337652 731 21 0.0027778 702 19 0.044248 425 20 0.0318918 394 14 0.0072807 515 17 0.0622042 278 17 0.011242 196 18 0.0484535 207 11 0.0209754 334 16 0.0131965 282 14 0.0599747 244 9 0.0106905 654 24 0.0253011 301 17 0.0392381 302 17 0.0285060 327 12 0.0056212 650 23 0.0041194 965 25 0.053537 419 18 0.0349959 342 16 0.02397343 241 12 0.0250836 389 14 0.0119048 125 4 0.0987625 225 15 0.0204950 384 20 0.0885027 372 14 0.0506058 287 13 0.0055769 267 10 0.0239688 240 10 0.0566853 376 12 0.0048265 0.0079688 0.0083559 0.0129089 0.0047290 0.0356817 0.0077293 0.00661330 0.0156936 0.0077829 0.0036108 0.0084824 0.0126663 0.01001563 0.0136760 0.00585950 0.12312247 0.0119830 0.01006644 0.0398072 0.0048502 0.0430924 0.0211652 0.0140126 0.0226473 0.0070426 0.0281119 0.0163758 0.0146412 0.0076271 0.0074476 0.0266580 0.0137722 0.0824440 0.00748347 0.01232493 0.0349847 0.0059983 0.0624248 0.0308155 0.0095928 0.0294968 0.0392018 6 0.0143766 0.0167998 -0.00150815 17 0.033236 0.030276 0.00296051 0.0763679 9.9825e-01 insignificant 1.00000 1.000000 insignificant 0.244849 9.9613e-01 insignificant 1 1.000000 insignificant -0.0031244 0.68601835 insignificant 1.00000 insignificant 0.0143766 0.0246190 -0.00854146 12 0.033236 0.0358365 -0.00260012 7.2836e-01 1.4265e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.7585e-01 7.0707e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01225563 4.1009e-01 insignificant 1.0000e+00 insignificant 0.0143766 0.0363165 -0.02451409 9 0.033236 0.054773 -0.0215363 8.1569e-01 2.8481e-05 weaklyHypometh 1.0000e+00 3.5601e-03 weaklyHypometh 7.1130e-01 7.5726e-02 insignificant 1.0000e+00 1.00000000 insignificant -0.02145432 2.1498e-01 insignificant 1.0000e+00 insignificant 0.0167998 0.0246190 -0.0073830 15 0.030276 0.0358365 -0.0055606 9.9999e-01 2.8893e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9964e-01 8.2639e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0091313 5.3804e-01 insignificant 1.0000e+00 insignificant 0.016800 0.0363165 -0.02395244 9 0.0302759 0.054773 -0.02449686 9.9983e-01 2.0588e-02 weaklyHypometh 1.0000e+00 0.73527896 insignificant 9.9993e-01 4.1622e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.01832995 2.8190e-01 insignificant 1.00000000 insignificant 0.0246190 0.0363165 -0.01471890 7 0.0358365 0.054773 -1.8936e-02 9.8264e-01 8.3660e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9567e-01 9.7726e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0091987 6.4453e-01 insignificant 1.0000e+00 insignificant chr17 19040050 19041050 50050 SNORD3C ENSG00000199298 0.1202590 300 18 0.1245750 468 18 0.0467718 734 18 0.0156322 252 11 0.1130063 490 18 0.1594975 435 18 0.0728017 777 18 0.0720793 535 18 0.07863834 858 17 0.067646 827 18 0.0887953 626 18 0.0490101 978 18 0.1296576 443 18 0.0362319 182 6 0.0742212 680 18 0.0649998 603 18 0.113568 613 18 0.0490431 357 14 0.0806966 678 18 0.0731838 339 14 0.158591 172 14 0.0000000 84 6 0.0763044 429 18 0.0635149 277 18 0.0476190 117 7 0.0665602 684 18 0.0916319 288 18 0.0578038 181 12 0.1049874 481 18 0.0873603 790 18 0.0851530 989 18 0.164139 559 18 0.0755051 600 18 0.00208956 477 18 0.0487816 988 17 0.0198413 134 16 0.0075758 252 19 0.0121820 670 18 0.0493421 304 14 0.0943759 347 15 0.0000000 253 11 0.0784314 229 11 0.1221719 181 12 0.0225026 0.0189258 0.0208201 0.0118029 0.0343672 0.0398331 0.0264997 0.02045728 0.0216984 0.0181391 0.0219284 0.0131672 0.0128333 0.03145748 0.0319777 0.01620753 0.01148713 0.0168808 0.01321048 0.0041071 0.0290542 0.0022304 0.0236801 0.0118532 0.0452557 0.0146677 0.0208647 0.0199560 0.0197892 0.0181232 0.0167649 0.0316254 0.0012077 0.0026855 0.00195188 0.00299057 0.0000000 0.0025269 0.0174366 0.0067610 0.0050469 0.0049819 0.0069677 9 0.0406264 0.0510790 -0.00567208 18 0.088206 0.095685 -0.00747938 0.5644135 5.3407e-01 insignificant 1.00000 1.000000 insignificant 0.594815 9.2861e-01 insignificant 1 1.000000 insignificant -0.0021230 0.89087965 insignificant 1.00000 insignificant 0.0406264 0.0067286 0.04215632 18 0.088206 0.0249535 0.06325255 1.6460e-13 1.0000e+00 weaklyHypermeth 3.8280e-12 1.0000e+00 weaklyHypermeth 3.5887e-10 1.0000e+00 weaklyHypermeth 1.7089e-08 1.0000e+00 weaklyHypermeth 0.05385319 3.3430e-03 weaklyHypermeth 6.5549e-02 weaklyHypermeth 0.0400969 0.0175038 0.01054142 14 0.075818 0.079831 -0.0040138 5.2300e-05 5.8350e-01 weaklyHypermeth 2.5357e-03 1.0000e+00 weaklyHypermeth 4.8928e-05 9.3572e-01 weaklyHypermeth 4.0774e-03 1.00000000 weaklyHypermeth 0.01265146 5.9467e-01 insignificant 1.0000e+00 insignificant 0.0510790 0.0067286 0.0481059 18 0.095685 0.0249535 0.0707319 2.9252e-13 1.0000e+00 weaklyHypermeth 8.1256e-12 1.0000e+00 weaklyHypermeth 9.8443e-07 1.0000e+00 weaklyHypermeth 2.9831e-05 1.0000e+00 weaklyHypermeth 0.0559762 6.0447e-03 weaklyHypermeth 1.0245e-01 insignificant 0.050298 0.0175038 0.01516138 14 0.0815539 0.079831 0.00172255 3.3283e-04 9.7779e-01 weaklyHypermeth 1.1862e-02 1.00000000 weaklyHypermeth 4.2603e-03 9.9647e-01 weaklyHypermeth 1.6386e-01 1.0000000 insignificant 0.01477442 5.6610e-01 insignificant 1.00000000 insignificant 0.0054839 0.0175038 -0.01767508 14 0.0055853 0.079831 -7.4246e-02 1.0000e+00 2.5662e-02 weaklyHypometh 1.0000e+00 1.8732e-01 insignificant 1.0000e+00 6.6721e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0412017 1.3258e-01 insignificant 1.0000e+00 insignificant chr17 19059050 19060050 50051 ENSG00000216244 0.0041497 318 16 0.0476595 392 19 0.0069672 754 23 0.0437214 486 8 0.0206609 405 19 0.0278990 612 24 0.0000000 570 20 0.0020661 517 19 0.00046816 612 20 0.000000 689 19 0.0147523 517 17 0.0035491 977 21 0.0043090 320 12 0.0000000 284 4 0.0045932 739 20 0.0429293 622 19 0.018812 336 19 0.0000000 366 12 0.0030642 482 12 0.0524077 360 17 0.031818 161 10 0.0084965 190 8 0.0129343 404 19 0.0472524 244 13 0.0016892 183 8 0.0082333 640 21 0.0386372 309 14 0.0142610 264 14 0.0088463 318 10 0.0486938 656 20 0.0377667 821 21 0.015966 549 21 0.0150263 326 16 0.00624680 267 9 0.0487013 316 18 0.0321970 65 5 0.0588269 207 16 0.0058579 358 21 0.0225817 374 12 0.0278926 300 10 0.0320901 309 8 0.0177291 252 4 0.0288046 411 12 0.0067132 0.0100439 0.0028240 0.0099951 0.0034170 0.0089979 0.0000000 0.00041012 0.0022472 0.0000000 0.0051980 0.0028885 0.0013055 0.00069123 0.0030277 0.00045568 0.05572437 0.0000000 0.00091722 0.0128379 0.0063158 0.0159310 0.0091518 0.0071690 0.0059520 0.0086297 0.0151734 0.0057138 0.0072829 0.0022034 0.0039190 0.0048384 0.0225413 0.0267216 0.00256892 0.04775006 0.0278158 0.0098858 0.0624677 0.0422625 0.0409835 0.0256616 0.0251344 4 0.0076270 0.0107618 -0.00257878 17 0.022306 0.024336 -0.00203073 0.9041216 4.0861e-01 insignificant 1.00000 1.000000 insignificant 0.967840 7.3855e-01 insignificant 1 1.000000 insignificant -0.0079825 0.21807897 insignificant 1.00000 insignificant 0.0076270 0.0168941 -0.00805203 12 0.022306 0.0225709 -0.00026514 9.3425e-01 3.4026e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8212e-01 8.9486e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01290896 2.3881e-01 insignificant 1.0000e+00 insignificant 0.0076270 0.0364520 -0.03097900 9 0.022306 0.027681 -0.0053749 8.9724e-01 4.7791e-10 weaklyHypometh 1.0000e+00 1.2836e-07 weaklyHypometh 9.8523e-01 6.4592e-03 weaklyHypometh 1.0000e+00 0.32490320 insignificant -0.01091920 3.2700e-02 weaklyHypometh 7.1086e-01 insignificant 0.0107618 0.0168941 -0.0054825 13 0.024336 0.0225709 0.0017656 9.2099e-01 7.5432e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6912e-01 8.6802e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0049264 6.4791e-01 insignificant 1.0000e+00 insignificant 0.010762 0.0364520 -0.02783848 9 0.0243365 0.027681 -0.00334418 9.9649e-01 4.4879e-04 weaklyHypometh 1.0000e+00 0.04986505 weaklyHypometh 9.9715e-01 2.1023e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.00293668 5.9919e-01 insignificant 1.00000000 insignificant 0.0168941 0.0364520 -0.01528323 9 0.0225709 0.027681 -5.1098e-03 1.0000e+00 5.0396e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.0000e+00 9.5510e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0019898 8.4170e-01 insignificant 1.0000e+00 insignificant chr17 19190350 19191350 50060 MIR1180 ENSG00000221540 0.7936028 263 5 0.8720290 319 5 0.4411255 98 4 0.7203178 198 3 0.7527778 50 6 0.8908654 265 5 0.7075758 46 4 0.9213450 134 5 0.75479520 77 5 0.740779 85 6 0.9091511 289 6 0.5228632 57 2 0.8099930 151 6 1.0000000 6 0 0.8083756 78 5 0.7129630 23 2 0.725000 16 2 0.7770414 273 3 0.8979488 257 6 0.9397354 213 5 0.809829 66 5 0.5000000 6 0 0.8806791 113 6 0.9207775 92 6 0.8905556 104 2 0.8240283 282 6 0.8718056 87 6 0.5833333 17 1 0.8257182 224 6 0.9146474 337 5 0.8752775 441 6 0.907491 231 6 0.0330287 350 6 0.07924493 172 5 0.0440141 177 5 0.1750000 24 2 0.0666667 214 6 0.2416195 332 6 0.7327935 93 3 0.5835461 190 5 0.7977477 239 3 0.6134089 127 3 0.6623016 156 3 0.8407108 0.8663753 0.4306200 0.8020130 0.8318452 0.8512866 0.8522727 0.97200031 0.7667957 0.6858866 0.9375758 0.4690934 0.8030065 0.93624539 0.7362578 0.72616276 0.75394053 0.7013948 0.90253948 0.9019816 0.8706502 0.7570888 0.9099595 0.8864070 0.8181548 0.8566313 0.8267411 0.6875000 0.8208436 0.8991795 0.8979580 0.9109873 0.0447875 0.0256218 0.00377264 0.25000000 0.0000000 0.3087869 0.7477588 0.6792251 0.8466860 0.6589358 0.6358418 0 0.8012422 0.8805000 -0.07847740 5 0.804457 0.874591 -0.07013321 0.9979292 2.3212e-03 weaklyHypometh 1.00000 0.232121 insignificant 0.895207 8.3254e-02 insignificant 1 1.000000 insignificant -0.0320976 0.52089781 lowCoverage 1.00000 lowCoverage 0.8012422 0.0654058 0.73819050 5 0.804457 0.0998051 0.70465220 1.5153e-42 1.0000e+00 hypermethylated 2.1647e-40 1.0000e+00 hypermethylated 8.0264e-15 1.0000e+00 hypermethylated 1.1466e-12 1.0000e+00 hypermethylated 0.67831860 6.7457e-10 lowCoverage 6.1325e-08 lowCoverage 0.8012422 0.7006211 0.09477235 3 0.804457 0.715905 0.0885522 3.6826e-03 9.7557e-01 lowCoverage 9.2064e-02 1.0000e+00 lowCoverage 3.7828e-02 8.6325e-01 lowCoverage 8.4063e-01 1.00000000 lowCoverage 0.10695468 5.7388e-02 lowCoverage 9.9079e-01 lowCoverage 0.8805000 0.0654058 0.8145769 5 0.874591 0.0998051 0.7747854 2.5573e-56 1.0000e+00 hypermethylated 2.5573e-53 1.0000e+00 hypermethylated 6.8375e-12 1.0000e+00 hypermethylated 1.1396e-09 1.0000e+00 hypermethylated 0.7104162 6.5433e-10 lowCoverage 7.2703e-08 lowCoverage 0.880500 0.7006211 0.16059483 3 0.8745906 0.715905 0.15868540 6.0779e-08 9.9970e-01 lowCoverage 4.6753e-06 1.00000000 lowCoverage 1.7463e-03 9.2153e-01 lowCoverage 7.9379e-02 1.0000000 lowCoverage 0.13905229 2.7450e-02 lowCoverage 0.77397739 lowCoverage 0.0654058 0.7006211 -0.66607515 3 0.0998051 0.715905 -6.1610e-01 1.0000e+00 2.4120e-16 lowCoverage 1.0000e+00 4.0200e-14 lowCoverage 1.0000e+00 8.0314e-07 lowCoverage 1.0000e+00 8.0314e-05 lowCoverage -0.5713639 2.6414e-06 lowCoverage 8.8046e-04 lowCoverage chr17 19313650 19314650 50063 ENSG00000209809 0.7827083 365 12 0.7666832 209 12 0.6598537 147 9 0.8434521 243 12 0.7368008 82 7 0.8313524 445 12 0.6927284 142 10 0.8030165 176 12 0.73220899 106 12 0.804127 137 12 0.7991625 426 12 0.7798431 95 6 0.8592500 261 12 0.7653061 52 6 0.7594859 164 11 0.5984728 76 7 0.705712 86 6 0.8665797 258 12 0.8314702 203 12 0.8003478 318 12 0.858135 67 7 0.8389791 141 11 0.8426469 199 11 0.6614679 96 9 0.8896509 117 9 0.8295645 257 12 0.7726832 95 8 0.8555556 58 4 0.7639525 213 12 0.8618301 250 12 0.8521673 241 12 0.833689 473 12 0.6239257 165 12 0.70011859 208 12 0.6310574 238 12 0.8352564 101 7 0.7209295 99 7 0.7436172 303 12 0.8218811 292 10 0.8782515 416 12 0.7420223 282 12 0.7929819 270 11 0.8238076 284 12 0.8456019 0.7742945 0.6185769 0.8696315 0.8092687 0.8417221 0.7732022 0.83566872 0.7809123 0.8274221 0.8289708 0.8208050 0.8814973 0.77267110 0.7973843 0.69312204 0.71155964 0.8886540 0.86778796 0.8238536 0.8234055 0.8875107 0.8607912 0.7485964 0.8864299 0.8341061 0.7649717 0.8512779 0.7810247 0.8577312 0.8621937 0.8458430 0.6875820 0.7102863 0.67049915 0.84990280 0.7161637 0.7395202 0.8497305 0.8873931 0.8220842 0.8627801 0.8527701 5 0.8143322 0.8405075 -0.02000383 12 0.794785 0.853102 -0.05831740 0.9902528 1.0953e-01 insignificant 1.00000 1.000000 insignificant 0.998915 5.9720e-02 insignificant 1 1.000000 insignificant -0.0507654 0.04037989 weaklyHypometh 1.00000 insignificant 0.8143682 0.7073609 0.11337685 12 0.795824 0.6917993 0.10402496 9.8675e-10 9.9789e-01 weaklyHypermeth 1.7941e-08 1.0000e+00 weaklyHypermeth 4.6851e-04 8.6263e-01 weaklyHypermeth 7.3204e-03 1.0000e+00 weaklyHypermeth 0.06177729 1.2230e-01 insignificant 1.0000e+00 insignificant 0.8143502 0.8387306 -0.03164936 12 0.789278 0.779737 0.0095413 9.9156e-01 1.2050e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9218e-01 2.2343e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.04086079 1.6709e-01 insignificant 1.0000e+00 insignificant 0.8402367 0.7073609 0.1342793 12 0.820803 0.6917993 0.1290037 1.3918e-11 1.0000e+00 weaklyHypermeth 3.3137e-10 1.0000e+00 weaklyHypermeth 3.8714e-06 9.9983e-01 weaklyHypermeth 9.6785e-05 1.0000e+00 weaklyHypermeth 0.1125427 1.4742e-02 weaklyHypermeth 2.0195e-01 insignificant 0.840382 0.8387306 -0.00841639 12 0.8464026 0.779737 0.06666599 9.4575e-01 7.0909e-01 insignificant 1.0000e+00 1.00000000 insignificant 7.2229e-01 9.6814e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.00990463 7.3586e-01 insignificant 1.00000000 insignificant 0.7073609 0.8391699 -0.14244067 12 0.6917993 0.826359 -1.3456e-01 9.9998e-01 1.1952e-07 weaklyHypometh 1.0000e+00 2.9879e-06 weaklyHypometh 9.9787e-01 1.3250e-04 weaklyHypometh 1.0000e+00 3.6806e-03 weaklyHypometh -0.1026381 2.8382e-02 weaklyHypometh 3.5927e-01 insignificant chr17 19596750 19597750 50067 ALDH3A1 ENSG00000108602 0.6759248 150 5 0.7626857 65 5 0.7297009 50 5 0.8481721 180 5 0.7000000 12 0 0.8592904 159 5 0.6666667 9 0 0.7947619 89 5 0.86428571 19 1 0.830556 25 3 0.8704795 148 5 0.8095238 11 1 0.8201754 51 3 1.0000000 3 0 0.8400000 30 3 0.7380952 10 1 0.583333 8 0 0.5817532 212 5 0.6877100 124 5 0.8734266 112 5 0.724242 38 4 0.7694272 59 3 0.8442067 85 5 0.5500000 29 3 0.6841304 85 5 0.8209398 118 5 0.7045455 59 5 0.7500000 6 0 0.7797835 80 5 0.8840985 125 5 0.7671998 197 5 0.865651 142 5 0.2166300 91 5 0.03514697 136 5 0.3743873 184 4 0.0586538 99 5 0.1942657 48 4 0.3011370 143 5 0.6280952 69 5 0.7590134 143 5 0.7566488 104 5 0.6865764 86 5 0.6171644 115 5 0.7054009 0.7219942 0.6183661 0.8321826 0.5290698 0.8499919 0.7326779 0.74246955 0.7865449 0.8443152 0.8878294 0.7775284 0.7444920 0.75489047 0.7209302 0.74928924 0.58732910 0.5332620 0.63089588 0.8856291 0.6652572 0.6672364 0.8488460 0.7412791 0.6635996 0.7844539 0.7244790 0.7503887 0.7896054 0.8612521 0.7516282 0.8734194 0.1141665 0.0125951 0.16079571 0.01990161 0.1422996 0.1487110 0.5973976 0.7424993 0.8130415 0.7510167 0.5245906 0 0.7638225 0.7820137 -0.01501221 5 0.772012 0.783814 -0.01180175 0.7054388 4.3420e-01 insignificant 1.00000 1.000000 insignificant 0.176710 5.1622e-01 insignificant 1 1.000000 insignificant 0.0148083 0.67986821 lowCoverage 1.00000 lowCoverage 0.7638225 0.2952924 0.52818332 5 0.772012 0.2269869 0.54502529 2.5054e-29 1.0000e+00 hypermethylated 1.1930e-27 1.0000e+00 hypermethylated 5.3232e-12 1.0000e+00 hypermethylated 3.3270e-10 1.0000e+00 hypermethylated 0.58012357 2.3641e-05 lowCoverage 8.4431e-04 lowCoverage 0.7638225 0.6692456 0.10192933 5 0.772012 0.671863 0.1001494 3.9169e-04 9.8871e-01 weaklyHypermeth 1.1870e-02 1.0000e+00 weaklyHypermeth 1.4796e-02 9.5226e-01 weaklyHypermeth 4.6237e-01 1.00000000 insignificant 0.08732741 4.7456e-02 lowCoverage 9.3530e-01 lowCoverage 0.7820137 0.2952924 0.5558781 5 0.783814 0.2269869 0.5568270 9.9551e-29 1.0000e+00 hypermethylated 8.2959e-27 1.0000e+00 hypermethylated 1.2731e-09 1.0000e+00 hypermethylated 7.4890e-08 1.0000e+00 hypermethylated 0.5653153 2.1490e-05 lowCoverage 8.2653e-04 lowCoverage 0.782014 0.6692456 0.11258516 5 0.7838139 0.671863 0.11195116 4.1816e-03 9.9639e-01 weaklyHypermeth 1.1004e-01 1.00000000 insignificant 1.6570e-02 9.6549e-01 weaklyHypermeth 5.0212e-01 1.0000000 insignificant 0.07251914 1.0065e-01 lowCoverage 1.00000000 lowCoverage 0.2952924 0.6692456 -0.45659779 5 0.2269869 0.671863 -4.4488e-01 9.9728e-01 3.3930e-13 hypomethylated 1.0000e+00 2.2620e-11 hypomethylated 1.0000e+00 7.8630e-07 hypomethylated 1.0000e+00 8.0314e-05 hypomethylated -0.4927962 5.7960e-05 lowCoverage 5.2690e-03 lowCoverage chr17 19741450 19742450 50068 ULK2 ENSG00000083290 0.8146755 182 5 0.8151515 71 5 0.5747549 59 5 0.7147436 40 3 0.7719697 37 4 0.8800000 119 5 0.7633333 38 4 0.7480186 48 4 0.73334161 79 5 0.758265 68 5 0.7728528 91 5 0.7755797 86 5 0.7392857 28 3 NA 0 0 0.7835784 66 4 0.7682984 56 5 0.692881 47 3 0.8096739 73 3 0.8607729 79 5 0.7480214 130 5 0.886667 27 3 0.9333333 27 2 0.7980865 105 5 0.7916667 13 1 0.8800000 16 2 0.7194805 45 5 0.8791209 26 2 0.8857143 18 2 0.7383838 74 5 0.8546381 106 5 0.8032853 43 3 0.785219 159 4 0.6008586 48 4 0.48761905 50 5 0.8828671 44 4 0.8733333 52 4 0.6266667 32 4 0.7600840 52 3 0.8237655 169 5 0.8140107 193 5 0.7904040 126 5 0.8065954 208 5 0.6903226 97 3 0.8360941 0.8016274 0.5763057 0.7377192 0.7669893 0.8861111 0.7962963 0.72943106 0.7503566 0.7894951 0.7604790 0.7640768 0.7542989 NA 0.7883306 0.78386428 0.78181387 0.8462831 0.85550188 0.7675872 0.9104938 0.9074074 0.8267138 0.8600183 0.9074074 0.7792208 0.8585674 0.9470899 0.7733820 0.8810650 0.8434974 0.8327778 0.6157174 0.4924162 0.87917638 0.85740741 0.5987654 0.7255291 0.8495573 0.8434064 0.8229286 0.8174548 0.8160096 0 0.7816750 0.8088012 -0.02748149 5 0.775337 0.800195 -0.02485799 0.8849592 1.3084e-01 insignificant 1.00000 1.000000 insignificant 0.940177 7.3395e-03 weaklyHypometh 1 0.611628 insignificant -0.0651488 0.01316548 lowCoverage 1.00000 lowCoverage 0.7816750 0.6942446 0.08710457 5 0.775337 0.6833058 0.09203082 4.5490e-03 9.7216e-01 weaklyHypermeth 3.3204e-02 1.0000e+00 weaklyHypermeth 1.1862e-01 7.6146e-01 insignificant 7.8554e-01 1.0000e+00 insignificant 0.05924596 4.1209e-01 lowCoverage 1.0000e+00 lowCoverage 0.7816750 0.8095839 -0.03678850 5 0.775337 0.809503 -0.0341668 9.2779e-01 1.4064e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.0466e-01 1.5322e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.02053552 4.9361e-01 lowCoverage 1.0000e+00 lowCoverage 0.8088012 0.6942446 0.1140229 5 0.800195 0.6833058 0.1168888 6.8822e-04 9.8657e-01 weaklyHypermeth 6.4926e-03 1.0000e+00 weaklyHypermeth 5.9562e-03 8.1141e-01 weaklyHypermeth 6.0778e-02 1.0000e+00 weaklyHypermeth 0.1243948 1.1757e-01 lowCoverage 8.8395e-01 lowCoverage 0.808801 0.8095839 -0.00860404 5 0.8001946 0.809503 -0.00930885 7.3471e-01 6.3018e-01 insignificant 1.0000e+00 1.00000000 insignificant 2.3106e-01 9.6196e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.04461331 1.8224e-01 lowCoverage 1.00000000 lowCoverage 0.6942446 0.8095839 -0.12445546 5 0.6833058 0.809503 -1.2620e-01 9.9190e-01 1.4882e-02 weaklyHypometh 1.0000e+00 1.2329e-01 insignificant 5.1173e-01 4.7709e-02 weaklyHypometh 1.0000e+00 4.2597e-01 insignificant -0.0797815 2.9255e-01 lowCoverage 1.0000e+00 lowCoverage chr17 20027450 20028450 50081 CYTSB ENSG00000128487 0.6163600 143 6 0.5684928 123 7 0.5333333 48 7 0.7577475 124 6 0.6728395 58 6 0.5694793 154 7 0.3842857 63 6 0.4794372 64 7 0.45190365 71 6 0.524242 47 4 0.6157055 195 7 0.7873016 31 4 0.4914249 76 6 0.6250000 34 3 0.5792159 48 3 0.5425926 40 3 0.800000 13 1 0.5781382 198 7 0.5885441 119 7 0.7630385 84 6 0.791667 25 1 0.7361111 21 1 0.5129389 73 3 0.5761905 33 3 0.6706924 74 6 0.6213805 132 7 0.6203704 30 3 0.6250000 19 1 0.6115119 130 6 0.6734069 112 7 0.6280220 96 7 0.538529 115 7 0.6894319 108 5 0.64193122 73 6 0.6315476 113 6 0.4714286 28 3 0.6730025 60 6 0.6817535 116 7 0.6317591 154 6 0.6876542 140 6 0.7474150 158 6 0.7863248 46 3 0.7147436 142 6 0.6949203 0.7412738 0.5248227 0.7546718 0.7479314 0.7166187 0.6409321 0.67529129 0.7410918 0.6680851 0.6819802 0.8626140 0.6587884 0.79654255 0.6813110 0.70354610 0.75801799 0.6972720 0.65903124 0.7283012 0.8457447 0.7337224 0.6565994 0.6971631 0.7486998 0.6794487 0.7712766 0.6552719 0.7322754 0.7870896 0.8360221 0.6959950 0.7423212 0.7156816 0.57676039 0.52978723 0.6822280 0.7503739 0.6901945 0.7619752 0.7715400 0.7846583 0.7563300 1 0.6691729 0.7000000 -0.02895132 6 0.519847 0.589009 -0.06916264 0.9824164 7.7021e-02 insignificant 1.00000 1.000000 insignificant 0.996039 1.9025e-01 insignificant 1 1.000000 insignificant -0.0373642 0.27827581 lowCoverage 1.00000 lowCoverage 0.6739003 0.6706827 -0.00066487 6 0.604240 0.6375153 -0.03327515 9.0501e-01 4.1069e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.9723e-01 4.2639e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03506175 4.1953e-01 insignificant 1.0000e+00 insignificant 0.6723230 0.7109375 -0.04618164 6 0.543816 0.726497 -0.1826806 9.9934e-01 3.1042e-02 weaklyHypometh 1.0000e+00 6.4613e-01 insignificant 9.9988e-01 6.4508e-03 weaklyHypometh 1.0000e+00 0.32490320 insignificant -0.11712519 7.0931e-03 weaklyHypometh 2.5751e-01 insignificant 0.7028302 0.6706827 0.0282445 6 0.618679 0.6375153 -0.0188361 6.3131e-01 8.0473e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.7335e-01 8.4882e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0023025 9.5546e-01 lowCoverage 1.0000e+00 lowCoverage 0.702353 0.7109375 -0.01831844 6 0.6068113 0.726497 -0.11968540 9.6531e-01 1.6744e-01 insignificant 1.0000e+00 1.00000000 insignificant 9.9088e-01 4.1555e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.07976095 4.3487e-02 lowCoverage 1.00000000 lowCoverage 0.6706827 0.7100313 -0.04666274 6 0.6375153 0.696107 -5.8592e-02 9.6676e-01 1.7625e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6874e-01 5.1882e-02 insignificant 1.0000e+00 4.4726e-01 insignificant -0.0820634 8.5687e-02 insignificant 7.3868e-01 insignificant chr17 20415250 20416250 50093 ENSG00000220835 0.8137876 291 7 0.7651604 242 8 0.7941872 313 8 0.9446511 240 6 0.7527299 209 8 0.7364609 388 7 0.7291881 246 8 0.8838167 247 8 0.78875346 253 8 0.877712 229 8 0.9007552 387 9 0.8796433 170 8 0.8547066 204 8 0.9554435 70 3 0.9173554 264 9 0.6922237 131 5 0.739881 166 7 0.7994949 248 4 0.8389473 658 9 0.8356016 264 8 0.831641 146 8 0.9365821 91 3 0.8302372 306 8 0.8733342 122 8 0.7584175 67 3 0.9366620 379 9 0.8722315 174 8 0.8743458 131 8 0.8932549 365 8 0.7479850 417 9 0.7882314 568 9 0.756453 427 9 0.8109067 358 9 0.64510476 269 8 0.6767382 439 10 0.7299922 60 4 0.6919084 227 8 0.7913111 399 11 0.8426312 287 5 0.8888538 227 7 0.8036021 202 4 0.7403030 326 4 0.9244058 272 5 0.9142495 0.8121699 0.7224879 0.9243377 0.8230840 0.8699201 0.7348900 0.88987819 0.8169811 0.8899254 0.8794891 0.8145570 0.8259742 0.87605156 0.8797301 0.63766909 0.74512947 0.8310914 0.87368475 0.8214572 0.8244567 0.8888840 0.8889555 0.9117769 0.7980497 0.8903967 0.8450698 0.8491062 0.8799881 0.8283350 0.8151696 0.9097711 0.6889669 0.5511447 0.47412178 0.68397961 0.8022106 0.8435510 0.8949928 0.9299940 0.8572664 0.8347306 0.8938970 4 0.8570607 0.8637218 -0.01042080 8 0.773984 0.736165 0.03781857 0.9845680 4.7680e-01 insignificant 1.00000 1.000000 insignificant 0.944589 4.1266e-01 insignificant 1 1.000000 insignificant -0.0165896 0.52596455 insignificant 1.00000 insignificant 0.8575269 0.7168950 0.15327518 8 0.784147 0.7283133 0.05583321 3.1625e-08 9.3179e-01 weaklyHypermeth 5.2709e-07 1.0000e+00 weaklyHypermeth 3.6909e-03 8.6264e-01 weaklyHypermeth 4.2425e-02 1.0000e+00 weaklyHypermeth 0.10069814 1.0747e-02 weaklyHypermeth 1.6534e-01 insignificant 0.8568962 0.8622527 -0.02712485 5 0.739212 0.772050 -0.0328373 8.1451e-01 2.1703e-02 weaklyHypometh 1.0000e+00 4.8230e-01 insignificant 9.9072e-01 1.4738e-02 weaklyHypometh 1.0000e+00 0.49688888 insignificant -0.01493416 6.9525e-01 insignificant 1.0000e+00 insignificant 0.8642208 0.7168950 0.1702509 9 0.836873 0.7283133 0.1085600 2.0113e-08 9.9932e-01 weaklyHypermeth 3.8678e-07 1.0000e+00 weaklyHypermeth 1.7939e-04 9.9929e-01 weaklyHypermeth 3.2034e-03 1.0000e+00 weaklyHypermeth 0.1172878 5.0969e-03 weaklyHypermeth 8.9418e-02 weaklyHypermeth 0.863950 0.8622527 -0.01778425 5 0.7724985 0.772050 0.00044894 9.5957e-01 5.6630e-02 insignificant 1.0000e+00 1.00000000 insignificant 9.9850e-01 2.1099e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.00165549 9.6612e-01 insignificant 1.00000000 insignificant 0.7168950 0.8629094 -0.20204855 5 0.7283133 0.836387 -1.0807e-01 9.9530e-01 4.1794e-05 hypomethylated 1.0000e+00 7.0837e-04 hypomethylated 1.0000e+00 1.0428e-03 weaklyHypometh 1.0000e+00 1.9675e-02 weaklyHypometh -0.1156323 2.3997e-02 weaklyHypometh 3.2429e-01 insignificant chr17 20751950 20752950 50097 CCDC144NL ENSG00000205212 0.1706829 587 7 0.0284091 469 7 0.0449635 287 7 0.0568395 435 7 0.0308474 230 7 0.0819496 605 7 0.0486977 357 7 0.2814699 305 7 0.04859603 227 7 0.116718 206 7 0.0751200 323 7 0.0272109 110 7 0.0557580 212 7 0.0411654 185 7 0.0424431 329 7 0.0233333 165 7 NA 0 0 0.0380180 1002 7 0.0393247 819 7 0.0429016 508 7 0.024845 106 7 0.1051587 57 7 0.0550540 214 7 0.0338346 143 7 0.0500000 95 7 0.1105611 502 7 0.0665247 490 7 0.0539683 85 9 0.0734607 505 7 0.0677275 545 7 0.0764362 902 7 0.049628 493 7 0.0247253 231 7 0.00444288 479 7 0.2500000 495 3 0.0000000 8 0 0.1103107 255 7 0.0091231 562 7 0.0948997 742 7 0.0768167 412 7 0.0867689 488 7 0.0577956 633 7 0.0565377 397 7 0.0747706 0.0742065 0.0723228 0.0743665 0.0738608 0.1214076 0.0704448 0.10730493 0.0677858 0.0770896 0.1078834 0.0414614 0.0849589 0.06272402 0.0646708 0.03555316 NA 0.0631685 0.06847930 0.0747080 0.0378561 0.1602311 0.0977362 0.0515540 0.0761853 0.1519805 0.0988836 0.1031062 0.1119325 0.1006106 0.1145611 0.0691845 0.0376741 0.0067696 0.00099206 0.01365269 0.0169658 0.0118142 0.1401175 0.1275295 0.1228200 0.0880635 0.0894046 7 0.0758668 0.1029056 -0.02570117 7 0.102373 0.046114 0.05625854 0.9673628 3.8530e-02 weaklyHypometh 1.00000 1.000000 insignificant 0.968331 2.2785e-01 insignificant 1 1.000000 insignificant 0.0041956 0.79702970 insignificant 1.00000 insignificant 0.0758029 0.0118460 0.07370023 7 0.097344 0.1174890 -0.02014474 1.0351e-06 9.5313e-01 weaklyHypermeth 1.3620e-05 1.0000e+00 weaklyHypermeth 5.1618e-03 9.8236e-01 weaklyHypermeth 5.6106e-02 1.0000e+00 weaklyHypermeth 0.00169520 9.6967e-01 insignificant 1.0000e+00 insignificant 0.0757720 0.1078248 -0.03639898 7 0.087610 0.057295 0.0303152 9.3282e-01 5.6624e-07 weaklyHypometh 1.0000e+00 9.4374e-05 weaklyHypometh 9.8825e-01 2.6306e-04 weaklyHypometh 1.0000e+00 0.04384351 weaklyHypometh -0.00643484 6.9657e-01 insignificant 1.0000e+00 insignificant 0.1029554 0.0123153 0.1028810 7 0.050725 0.1307401 -0.0800147 6.2097e-06 9.9984e-01 weaklyHypermeth 8.5065e-05 1.0000e+00 weaklyHypermeth 1.5056e-02 9.9802e-01 weaklyHypermeth 1.3813e-01 1.0000e+00 insignificant -0.0025004 9.5363e-01 insignificant 1.0000e+00 insignificant 0.102906 0.1077844 -0.00878393 7 0.0461140 0.052086 -0.00597200 9.0835e-01 3.3190e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant 9.9956e-01 4.9396e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant -0.01063047 3.3797e-01 insignificant 1.00000000 insignificant 0.0123153 0.1078248 -0.11589262 7 0.1307401 0.057295 7.3445e-02 1.0000e+00 5.5117e-08 weaklyHypometh 1.0000e+00 1.4504e-06 weaklyHypometh 9.9999e-01 1.8505e-04 weaklyHypometh 1.0000e+00 4.6262e-03 weaklyHypometh -0.0081300 8.5046e-01 insignificant 1.0000e+00 insignificant chr17 21254550 21255550 50109 KCNJ12 ENSG00000184185 0.8139431 929 11 0.7723751 945 11 0.7262966 902 11 0.8271137 730 11 0.8284248 541 11 0.8254888 1277 11 0.7012283 721 11 0.8270802 953 11 0.76555345 799 11 0.779158 818 11 0.7894251 966 11 0.6805358 469 11 0.7009756 969 11 0.8583381 461 7 0.8388157 922 11 0.8025494 325 9 0.441260 937 6 0.7335549 882 11 0.8577400 1584 11 0.7606243 1022 10 0.884497 416 11 0.6647061 387 11 0.7750278 790 11 0.7519980 438 11 0.8343734 247 10 0.8618309 1154 11 0.7777123 733 11 0.7813111 444 11 0.8441485 1132 11 0.8629604 1154 11 0.8316714 1530 11 0.879951 1132 11 0.6628561 837 11 0.75679841 728 11 0.7672913 506 9 0.5761320 173 8 0.6799727 633 11 0.6204372 1242 11 0.7896609 1197 11 0.7742087 993 11 0.6388837 694 11 0.7338144 929 11 0.7486192 823 11 0.8039889 0.7372840 0.7298844 0.8475727 0.8045127 0.8394683 0.7610510 0.79262194 0.7753387 0.8344625 0.8546212 0.7620611 0.7804182 0.82007449 0.8245831 0.73688275 0.60812016 0.7489233 0.85735391 0.7673038 0.9248266 0.6829916 0.7832851 0.8283060 0.8263147 0.8721020 0.7844661 0.8804327 0.8376511 0.8552160 0.8525631 0.8813368 0.6756612 0.7107008 0.84524487 0.57980044 0.7769431 0.6885829 0.7971387 0.7703149 0.6817049 0.7437236 0.7878375 11 0.8042476 0.8395940 -0.03639458 11 0.765679 0.774052 -0.00837289 0.8880586 8.8847e-04 weaklyHypometh 1.00000 0.148078 insignificant 0.986113 4.8926e-04 weaklyHypometh 1 0.081543 weaklyHypometh -0.0459916 0.11053301 insignificant 1.00000 insignificant 0.8038953 0.7106094 0.09033565 11 0.740038 0.6869990 0.05303861 3.8874e-11 8.4099e-01 weaklyHypermeth 8.0987e-10 1.0000e+00 weaklyHypermeth 1.7500e-04 8.1717e-01 weaklyHypermeth 2.9661e-03 1.0000e+00 weaklyHypermeth 0.08927613 3.6331e-02 weaklyHypermeth 4.2743e-01 insignificant 0.8043313 0.7668248 0.03514691 11 0.787736 0.758491 0.0292450 5.3250e-05 9.9303e-01 weaklyHypermeth 2.5357e-03 1.0000e+00 weaklyHypermeth 4.3760e-04 9.6532e-01 weaklyHypermeth 2.4311e-02 1.00000000 weaklyHypermeth 0.02948670 4.0181e-01 insignificant 1.0000e+00 insignificant 0.8395772 0.7105711 0.1243736 11 0.756671 0.6821528 0.0745181 5.5844e-12 9.9478e-01 weaklyHypermeth 1.3621e-10 1.0000e+00 weaklyHypermeth 1.2477e-04 9.8948e-01 weaklyHypermeth 2.3106e-03 1.0000e+00 weaklyHypermeth 0.1352677 4.5250e-03 weaklyHypermeth 8.2274e-02 weaklyHypermeth 0.839757 0.7668248 0.08305538 11 0.8405601 0.758491 0.08206896 3.5028e-07 9.9990e-01 weaklyHypermeth 2.1893e-05 1.00000000 weaklyHypermeth 6.6062e-05 9.9962e-01 weaklyHypermeth 5.0817e-03 1.0000000 weaklyHypermeth 0.07547830 4.6745e-02 weaklyHypermeth 1.00000000 insignificant 0.7107760 0.7667745 -0.04151953 11 0.6849684 0.736536 -5.1567e-02 9.4784e-01 6.1070e-03 weaklyHypometh 1.0000e+00 6.0466e-02 weaklyHypometh 9.8113e-01 1.0086e-01 insignificant 1.0000e+00 7.2558e-01 insignificant -0.0597894 1.7319e-01 insignificant 1.0000e+00 insignificant chr17 22683850 22684850 50121 WSB1 ENSG00000109046 0.0549891 683 22 0.1176143 1165 23 0.0079669 1040 23 0.0078571 598 19 0.1437302 726 20 0.1491152 1084 21 0.0939932 995 20 0.0690909 775 20 0.00607928 831 20 0.010170 812 20 0.1486557 965 20 0.0739836 736 20 0.0538462 652 20 0.0792593 427 14 0.1686465 1171 20 0.0931238 693 20 0.080196 309 9 0.1097479 789 23 0.0837765 1570 20 0.1367783 769 23 0.079245 422 19 0.0253739 397 16 0.0863724 744 23 0.0278392 477 21 0.0631532 908 14 0.0042598 1240 23 0.0066006 844 20 0.1069727 536 21 0.1095108 743 20 0.1005809 1272 23 0.0272760 1851 23 0.167883 967 23 0.0142536 868 23 0.00096154 699 20 0.0666667 1132 18 0.0000000 343 16 0.0355442 631 23 0.0791159 1075 23 0.1477721 915 21 0.0037653 651 20 0.0863094 573 22 0.1121693 751 20 0.1181442 527 18 0.0124997 0.0067735 0.0049806 0.0144472 0.0046863 0.0121441 0.0054401 0.00287488 0.0082189 0.0113390 0.0056356 0.0114177 0.0066156 0.01111976 0.0070838 0.00203960 0.09729486 0.0086862 0.00497237 0.0069382 0.0115352 0.0041511 0.0076736 0.0149853 0.0102632 0.0033980 0.0044701 0.0118217 0.0065023 0.0049000 0.0045072 0.0071105 0.0071253 0.0021300 0.00000000 0.00018474 0.0019914 0.0028117 0.0082028 0.0032423 0.0107410 0.0025173 0.0123476 15 0.0139402 0.0114445 0.00172945 23 0.138038 0.169039 -0.03100037 0.3371029 8.6948e-01 insignificant 1.00000 1.000000 insignificant 0.584268 7.1299e-01 insignificant 1 1.000000 insignificant 0.0173420 0.35577798 insignificant 1.00000 insignificant 0.0134176 0.0065304 0.00622606 23 0.114174 0.0728363 0.04133767 1.9818e-03 1.0000e+00 weaklyHypermeth 1.5729e-02 1.0000e+00 weaklyHypermeth 1.5088e-02 1.0000e+00 weaklyHypermeth 1.4939e-01 1.0000e+00 insignificant 0.05167401 1.3127e-02 weaklyHypermeth 1.9024e-01 insignificant 0.0133055 0.0111209 0.00094180 20 0.112192 0.144299 -0.0321076 4.0658e-01 7.8532e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.1620e-01 9.1169e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.00920106 7.4526e-01 insignificant 1.0000e+00 insignificant 0.0112587 0.0065304 0.0042574 23 0.145824 0.0728363 0.0729874 1.3488e-01 9.9981e-01 insignificant 7.4518e-01 1.0000e+00 insignificant 1.0655e-01 1.0000e+00 insignificant 7.5032e-01 1.0000e+00 insignificant 0.0343320 1.0807e-01 insignificant 8.2499e-01 insignificant 0.010692 0.0111209 -0.00114262 20 0.1048744 0.144299 -0.03942513 6.7614e-01 4.3287e-01 insignificant 1.0000e+00 1.00000000 insignificant 7.2654e-01 6.4999e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.02654309 3.8215e-01 insignificant 1.00000000 insignificant 0.0061181 0.0111209 -0.00496754 20 0.0573825 0.144299 -8.6917e-02 9.9999e-01 3.7771e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.0000e+00 5.1045e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0608751 7.0638e-02 insignificant 6.3638e-01 insignificant chr17 22730850 22731850 50127 WSB1 ENSG00000109046 0.8966324 376 10 0.7997403 118 7 0.8175824 58 7 0.8246507 366 10 0.6058016 72 7 0.7171600 108 8 0.8575964 87 7 0.7722589 100 7 0.79013605 83 7 0.864168 210 7 0.9128268 116 7 0.7996289 54 5 0.5855791 263 7 0.8777056 75 7 0.8326073 139 7 1.0000000 29 4 0.653231 38 5 0.5975849 378 11 0.8648410 120 7 0.7084105 109 6 0.595238 21 1 0.1630998 135 7 0.7804167 127 7 0.3008818 47 6 0.8596643 103 7 0.8400205 177 10 0.5406762 98 7 0.7320437 51 3 0.6139359 171 7 0.9557666 192 7 0.8499863 277 10 0.900498 151 10 0.0835717 122 7 0.38528139 74 7 0.1428571 127 7 0.0000000 75 7 0.1021057 107 7 0.1103122 203 10 0.2218615 305 10 0.4303488 324 10 0.5378261 277 10 0.5682878 325 10 0.4253327 251 10 0.9137111 0.7792633 0.7876008 0.8074811 0.7764645 0.6144557 0.8557568 0.81383998 0.7482786 0.8740468 0.9180778 0.7911713 0.5401705 0.85479205 0.8018829 1.00000000 0.65400738 0.5209875 0.82918283 0.6407625 0.5986700 0.1559927 0.8601526 0.2974141 0.8394751 0.7831147 0.6039461 0.8174305 0.6867695 0.9126838 0.7847785 0.8583056 0.0783645 0.3944018 0.07511737 0.00000000 0.0622636 0.0143171 0.1615242 0.3148235 0.4025333 0.4186516 0.2710704 4 0.7577640 0.7273902 0.02270799 7 0.736943 0.730977 0.00596567 0.6923192 2.2558e-01 insignificant 1.00000 1.000000 insignificant 0.370900 9.1382e-01 insignificant 1 1.000000 insignificant 0.1112215 0.16248334 insignificant 1.00000 insignificant 0.7576804 0.1073446 0.64589471 7 0.715022 0.1702918 0.54472989 5.2933e-50 1.0000e+00 hypermethylated 5.2933e-47 1.0000e+00 hypermethylated 7.5325e-17 1.0000e+00 hypermethylated 1.8831e-14 1.0000e+00 hypermethylated 0.65155243 7.3713e-06 hypermethylated 2.9485e-04 hypermethylated 0.7581315 0.4514170 0.40706220 10 0.728076 0.401341 0.3267345 1.3753e-26 1.0000e+00 hypermethylated 6.8765e-24 1.0000e+00 hypermethylated 6.6816e-17 1.0000e+00 hypermethylated 3.3408e-14 1.00000000 hypermethylated 0.35217573 2.3348e-03 weaklyHypermeth 1.3734e-01 insignificant 0.7270375 0.1073446 0.6245898 7 0.708559 0.1702918 0.5382671 6.3049e-22 1.0000e+00 hypermethylated 2.8658e-20 1.0000e+00 hypermethylated 1.9801e-11 1.0000e+00 hypermethylated 2.4751e-09 1.0000e+00 hypermethylated 0.5403309 1.6542e-05 hypermethylated 7.0206e-04 hypermethylated 0.727155 0.4514170 0.41059980 7 0.7123673 0.401341 0.31102616 5.8890e-14 1.0000e+00 hypermethylated 1.4723e-11 1.00000000 hypermethylated 1.4069e-09 1.0000e+00 hypermethylated 4.6896e-07 1.0000000 hypermethylated 0.24095423 2.2588e-02 weaklyHypermeth 0.77397739 insignificant 0.1063830 0.4514170 -0.22562282 7 0.1554699 0.401341 -2.4587e-01 1.0000e+00 2.0162e-07 hypomethylated 1.0000e+00 4.6888e-06 hypomethylated 1.0000e+00 1.2403e-05 hypomethylated 1.0000e+00 5.9064e-04 hypomethylated -0.2993767 5.4076e-03 weaklyHypometh 1.2461e-01 insignificant chr17 23307750 23308750 50170 ENSG00000214779 0.8955711 198 5 0.8137474 125 5 0.8859238 94 5 0.8239230 188 3 0.8292308 81 5 0.9054910 204 5 0.8378285 154 5 0.9503469 100 4 0.85917136 89 5 0.850855 48 4 0.8114479 172 5 0.9333333 35 4 0.8539394 71 5 0.9629630 27 3 0.9030303 90 5 0.8555556 49 5 0.800000 14 2 0.8106782 184 3 0.8728528 163 5 0.8928275 160 5 0.955556 43 5 0.7250000 24 3 0.9194406 157 5 0.8251951 61 4 0.9579323 101 3 0.8733404 117 5 0.8899725 92 4 0.9333333 45 4 0.9394958 99 4 0.9005087 152 5 0.7993584 166 5 0.907941 185 5 0.7388375 82 4 0.68821429 136 5 0.9903846 107 4 0.5666667 16 1 0.7953810 98 5 0.7597408 125 5 0.7741860 200 4 0.7288383 191 5 0.7455731 235 3 0.9024845 79 3 0.7672755 153 3 0.9201229 0.7800524 0.8931344 0.9088891 0.8685269 0.9491174 0.8904484 0.97172586 0.9264041 0.9449472 0.8163424 0.9891068 0.8805704 0.95704906 0.8739354 0.92411038 0.93457817 0.9577172 0.90525371 0.9086975 0.9927378 0.8300654 0.9186800 0.9087700 0.9378677 0.9083202 0.9014221 0.8980285 0.9074806 0.9050116 0.8890007 0.9181743 0.8800376 0.8422035 0.97115277 0.69063181 0.8031793 0.8174525 0.9745622 0.8870475 0.8822683 0.9137539 0.9186616 3 0.8944321 0.8969404 -0.00381845 5 0.872557 0.882469 -0.00991156 0.5026674 1.9044e-01 insignificant 1.00000 1.000000 insignificant 0.515887 7.8152e-02 insignificant 1 1.000000 insignificant -0.0181537 0.43913498 lowCoverage 1.00000 lowCoverage 0.8944321 0.8368794 0.05343454 4 0.872557 0.7820911 0.09046630 1.1948e-03 9.9026e-01 lowCoverage 1.0040e-02 1.0000e+00 lowCoverage 1.0982e-02 9.6987e-01 lowCoverage 1.1321e-01 1.0000e+00 lowCoverage 0.11089835 1.0988e-01 lowCoverage 9.3911e-01 lowCoverage 0.8940338 0.9228972 -0.01731751 4 0.727131 0.743307 -0.0161754 9.6317e-01 3.8184e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.0020e-01 6.7996e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 0.08376435 4.9851e-02 lowCoverage 9.5401e-01 lowCoverage 0.8969404 0.8368794 0.0595075 4 0.882469 0.7820911 0.1003779 2.1400e-03 9.6279e-01 lowCoverage 1.8449e-02 1.0000e+00 lowCoverage 1.5344e-03 9.4984e-01 lowCoverage 2.0638e-02 1.0000e+00 lowCoverage 0.1290520 7.4433e-02 lowCoverage 6.4167e-01 lowCoverage 0.896940 0.9250585 -0.01757162 4 0.8824690 0.891968 -0.00949890 3.9418e-01 1.2909e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 2.6959e-01 4.7602e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 0.10191805 2.5362e-02 lowCoverage 0.77397739 lowCoverage 0.8368794 0.9250585 -0.07141279 3 0.7820911 0.891968 -1.0988e-01 9.7449e-01 1.4686e-02 lowCoverage 1.0000e+00 1.2329e-01 lowCoverage 7.4027e-01 5.0145e-02 lowCoverage 1.0000e+00 4.3987e-01 lowCoverage -0.0271340 6.8669e-01 lowCoverage 1.0000e+00 lowCoverage chr17 23616150 23617150 50183 ENSG00000203479 0.8846685 495 9 0.8698485 303 11 0.9115114 254 11 0.9374616 488 12 0.8992241 212 11 0.9632253 611 12 0.9233445 272 8 0.8865761 252 11 0.84470075 269 11 0.808967 281 8 0.8715960 556 11 0.8877129 154 8 0.9655230 283 8 0.9637477 193 8 0.9125538 335 8 0.7758838 128 8 0.823899 92 6 0.8112399 500 8 0.9039448 447 9 0.9689234 333 12 0.720069 97 8 0.9705871 235 8 0.8455294 363 12 0.9231602 186 10 0.9697872 101 6 0.9283224 442 11 0.9317729 302 11 0.8504469 150 11 0.9347311 277 8 0.9382496 431 12 0.9606385 532 12 0.931369 473 12 0.8628952 381 11 0.74910386 287 11 0.7727273 148 11 0.8826695 168 9 0.8167968 199 11 0.8784081 337 12 0.9661920 601 9 0.9632790 500 12 0.9586576 466 9 0.9653801 390 9 0.9627807 434 11 0.9160105 0.8709421 0.8924342 0.9453449 0.8553840 0.9689994 0.8994980 0.88792823 0.9122899 0.9459910 0.8414405 0.8465098 0.9526839 0.94727496 0.8749227 0.79596690 0.84803721 0.9458435 0.84499929 0.9666979 0.8424646 0.9568056 0.9117134 0.9296448 0.9613457 0.9182930 0.9292681 0.9179661 0.9101761 0.9240749 0.9440154 0.9447951 0.8344916 0.7568139 0.66377315 0.89283722 0.8764899 0.8679989 0.9648447 0.9490500 0.9405249 0.9589321 0.9523110 8 0.9168473 0.9339649 -0.01382796 11 0.846585 0.832502 0.01408291 0.5024582 6.2636e-02 insignificant 1.00000 1.000000 insignificant 0.277250 2.0004e-01 insignificant 1 1.000000 insignificant -0.0179943 0.46636478 insignificant 1.00000 insignificant 0.9168216 0.8684211 0.05474616 12 0.835627 0.7426344 0.09299215 2.0815e-10 8.9899e-01 weaklyHypermeth 4.0028e-09 1.0000e+00 weaklyHypermeth 2.0768e-04 9.8198e-01 weaklyHypermeth 3.4614e-03 1.0000e+00 weaklyHypermeth 0.06362747 4.1798e-02 weaklyHypermeth 4.7498e-01 insignificant 0.9176361 0.9519030 -0.03906176 9 0.920731 0.963122 -0.0423906 9.9659e-01 1.8407e-03 weaklyHypometh 1.0000e+00 9.6880e-02 weaklyHypometh 9.9975e-01 3.3050e-03 weaklyHypometh 1.0000e+00 0.22863152 insignificant -0.07253031 1.4934e-05 weaklyHypometh 3.7336e-03 weaklyHypometh 0.9339465 0.8684211 0.0655336 11 0.820538 0.7426344 0.0779033 2.8239e-08 9.5199e-01 weaklyHypermeth 5.2294e-07 1.0000e+00 weaklyHypermeth 3.1371e-06 7.2993e-01 weaklyHypermeth 8.2555e-05 1.0000e+00 weaklyHypermeth 0.0816218 2.1481e-02 weaklyHypermeth 2.7377e-01 insignificant 0.934971 0.9519030 -0.02485570 8 0.9364607 0.963122 -0.02666090 9.9882e-01 9.9648e-03 weaklyHypometh 1.0000e+00 0.39859090 insignificant 9.9735e-01 6.2969e-03 weaklyHypometh 1.0000e+00 0.6996555 insignificant -0.05453599 2.3158e-02 weaklyHypometh 0.77397739 insignificant 0.8695652 0.9519030 -0.09615965 9 0.8664068 0.963122 -9.6715e-02 9.9999e-01 5.4194e-07 weaklyHypometh 1.0000e+00 1.1060e-05 weaklyHypometh 9.9995e-01 1.1982e-05 weaklyHypometh 1.0000e+00 5.9064e-04 weaklyHypometh -0.1361578 2.0086e-03 weaklyHypometh 6.0137e-02 weaklyHypometh chr17 23674150 23675150 50185 TMEM97 ENSG00000109084 0.7040018 139 5 0.4722411 118 5 0.5141304 63 4 0.6250626 124 5 0.7694888 65 4 0.7912562 96 3 0.6443140 69 5 0.7203209 59 4 0.60281385 56 4 0.745679 43 4 0.7083087 153 4 0.5724242 29 3 0.6832940 71 5 0.4382716 26 2 0.6261243 74 5 0.7190476 35 3 0.964286 20 2 0.5461701 115 5 0.8432624 115 4 0.5943878 108 4 0.818067 45 3 1.0000000 7 0 0.7105556 132 7 0.6964286 25 2 0.8000000 33 1 0.5167637 131 5 0.9270833 28 3 0.6527778 32 2 0.6398019 69 4 0.7389565 99 5 0.5361301 122 4 0.717778 106 3 0.4524878 93 5 0.69333333 72 4 0.3520046 89 4 0.8333333 13 1 0.6721612 71 4 0.5577443 101 4 0.6241165 126 6 0.6051587 111 5 0.6537607 164 6 0.6208333 99 4 0.5862158 157 6 0.9504269 0.8247472 0.6686594 0.8856293 0.8379038 0.7701149 0.7659285 0.87892157 0.8376623 0.9148148 0.8415170 0.7787879 0.9307359 0.65214078 0.8166336 0.87698413 0.91822431 0.8115942 0.89527918 0.8339286 0.8998599 1.0000000 0.8166667 0.9062500 0.9905258 0.8230624 0.8854167 0.9621719 0.8334790 0.9470290 0.8704306 0.9078704 0.7697811 0.8520833 0.72804796 0.88888889 0.7124542 0.8913810 0.8615690 0.8888889 0.9013598 0.8179563 0.7681437 1 0.7490494 0.8009709 -0.02055957 5 0.654226 0.675341 -0.02111461 0.9078567 2.1129e-01 insignificant 1.00000 1.000000 insignificant 0.873512 1.4556e-01 insignificant 1 1.000000 insignificant -0.0652843 0.20639900 lowCoverage 1.00000 lowCoverage 0.7490494 0.7757437 0.03189417 4 0.654226 0.5186828 0.13554322 6.8585e-02 9.8276e-01 lowCoverage 4.0108e-01 1.0000e+00 lowCoverage 5.2471e-01 9.7154e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.07073349 3.9002e-01 lowCoverage 1.0000e+00 lowCoverage 0.7495232 0.7168950 -0.02439619 4 0.659156 0.639705 0.0194511 9.8126e-01 2.7957e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.2307e-01 4.2814e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 0.04622724 1.4598e-01 lowCoverage 1.0000e+00 lowCoverage 0.8009650 0.7722096 0.0508399 4 0.697911 0.4445852 0.2533258 6.4493e-02 9.9862e-01 lowCoverage 3.7937e-01 1.0000e+00 lowCoverage 3.8440e-01 9.9945e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.1360178 1.3561e-01 lowCoverage 1.0000e+00 lowCoverage 0.801703 0.7168950 -0.01006142 4 0.6912807 0.639705 0.05157611 7.7237e-01 3.5070e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 5.8794e-01 6.2751e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 0.11151151 2.1910e-02 lowCoverage 0.77397739 lowCoverage 0.7775229 0.7168950 -0.05208879 3 0.5658357 0.639705 -7.3869e-02 9.9992e-01 2.1063e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.9826e-01 6.8498e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0245062 7.4787e-01 lowCoverage 1.0000e+00 lowCoverage chr17 24145150 24146150 50192 TRAF4 ENSG00000076604 0.7818807 269 7 0.6210296 143 5 0.5557862 110 5 0.8082480 208 7 0.7391575 74 5 0.8388289 254 7 0.6548746 88 5 0.6460588 114 5 0.77922078 71 5 0.671964 73 4 0.7258259 163 5 0.5001068 42 4 0.8243723 111 5 0.7714286 32 3 0.6225122 107 5 0.7095238 35 3 0.641420 60 3 0.8665717 190 7 0.8321811 180 7 0.7863268 220 8 0.542226 46 4 0.7145764 59 5 0.7963403 137 5 0.8159544 53 5 0.5457875 42 5 0.8171119 242 7 0.8100187 58 4 0.8066667 30 3 0.7611951 104 5 0.7495040 172 7 0.8132947 245 8 0.677220 318 7 0.6414007 133 5 0.67129630 98 5 0.8366071 187 7 0.8284091 95 5 0.5259921 70 5 0.8041466 221 7 0.8911756 220 7 0.8557374 232 7 0.7955202 218 7 0.8512235 156 5 0.8041216 220 7 0.8222323 0.7001102 0.7563085 0.8101026 0.8575041 0.8212416 0.7409813 0.72934030 0.7663028 0.7703837 0.7955137 0.5965664 0.8175983 0.74088267 0.8034667 0.71719858 0.66709848 0.8298884 0.83547069 0.8113725 0.6745869 0.7696866 0.7857995 0.7802009 0.7378030 0.7644243 0.7574961 0.8216312 0.7716329 0.7680893 0.7793747 0.7998127 0.7153535 0.7646277 0.76196809 0.71363992 0.7149823 0.7465188 0.8867897 0.8220001 0.7884736 0.8900512 0.8564113 3 0.7900943 0.7920266 0.01326334 7 0.776594 0.769039 0.00755514 0.3866643 8.0155e-01 insignificant 1.00000 1.000000 insignificant 0.744424 5.5071e-01 insignificant 1 1.000000 insignificant -0.0186254 0.61780944 insignificant 1.00000 insignificant 0.7900943 0.7898010 0.03527541 7 0.776594 0.7457541 0.03084032 4.6767e-03 2.2327e-01 weaklyHypermeth 3.3889e-02 1.0000e+00 weaklyHypermeth 9.7417e-02 1.5078e-01 insignificant 6.7651e-01 1.0000e+00 insignificant 0.00089063 9.8774e-01 insignificant 1.0000e+00 insignificant 0.7900943 0.8456376 -0.05086149 7 0.776594 0.824483 -0.0478889 9.8551e-01 1.1968e-02 weaklyHypometh 1.0000e+00 3.4194e-01 insignificant 9.9231e-01 1.1432e-03 weaklyHypometh 1.0000e+00 0.10392582 insignificant -0.12068974 5.4841e-04 weaklyHypometh 4.9855e-02 weaklyHypometh 0.7920266 0.7898010 0.0192840 7 0.769039 0.7457541 0.0232852 1.5017e-01 5.4666e-01 insignificant 8.1612e-01 1.0000e+00 insignificant 3.0277e-01 5.5610e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0195160 7.4839e-01 insignificant 1.0000e+00 insignificant 0.792165 0.8460803 -0.06384088 7 0.7947015 0.843985 -0.04928358 9.8978e-01 3.6947e-03 weaklyHypometh 1.0000e+00 0.23091697 insignificant 8.7776e-01 1.8785e-03 weaklyHypometh 1.0000e+00 0.3757099 insignificant -0.10206434 8.9745e-03 weaklyHypometh 0.56955042 insignificant 0.7898010 0.8456376 -0.07110429 7 0.7457541 0.824483 -7.8729e-02 3.6999e-01 5.3499e-04 weaklyHypometh 1.0000e+00 7.6428e-03 weaklyHypometh 4.4549e-01 5.8380e-03 weaklyHypometh 1.0000e+00 8.3106e-02 weaklyHypometh -0.1215804 6.4773e-02 insignificant 5.9425e-01 insignificant chr17 24216650 24217650 50199 MIR144 ENSG00000207618 0.5667305 201 5 0.6454418 100 5 0.3895144 69 4 0.8072400 129 5 0.8429705 43 4 0.7165657 247 5 0.8209524 64 5 0.5952063 89 5 0.45749158 70 4 0.741176 48 3 0.6801767 178 5 0.8962585 24 2 0.7488095 48 5 0.7111111 18 2 0.9804762 49 2 0.9648148 27 2 0.888545 37 2 0.5902581 229 7 0.8687597 163 4 0.8751890 163 5 0.886434 57 4 0.8504762 55 3 0.8652916 122 5 0.5831963 61 4 0.8592115 91 4 0.8582284 133 4 0.8661859 50 4 0.8789683 28 2 0.6960183 95 4 0.9020025 114 5 0.6935054 192 5 0.836015 247 4 0.8036410 89 5 0.74358974 77 4 0.6556378 57 2 0.6373737 25 2 0.6380952 55 5 0.7944862 143 5 0.9285778 154 5 0.8534939 175 5 0.7748358 164 5 0.8432127 123 4 0.7760824 155 5 0.8825978 0.8547224 0.6144318 0.8918344 0.8267717 0.8375327 0.8712036 0.87259464 0.8637855 0.8170449 0.8930280 0.8227409 0.9177822 0.84511617 0.9631609 0.91435069 0.82726972 0.8636331 0.90656879 0.8793731 0.9054017 0.8317528 0.8783808 0.9526609 0.9441904 0.9199007 0.8660408 0.8316929 0.9078048 0.9098486 0.8989625 0.8479482 0.7860574 0.8247527 0.71540305 0.76664281 0.7523264 0.8394313 0.9511736 0.8815884 0.9350937 0.9149268 0.8420390 2 0.8637275 0.9036145 -0.02028279 5 0.664988 0.764281 -0.09929321 0.9777965 5.0647e-02 insignificant 1.00000 1.000000 insignificant 0.997649 2.9450e-02 weaklyHypometh 1 1.000000 insignificant -0.0752433 0.11541267 lowCoverage 1.00000 lowCoverage 0.8637275 0.8004484 0.06853968 5 0.664988 0.8228242 -0.15783602 2.6420e-03 1.6489e-01 weaklyHypermeth 1.9785e-02 1.0000e+00 weaklyHypermeth 1.5342e-02 3.1521e-01 weaklyHypermeth 1.5041e-01 1.0000e+00 insignificant 0.02724711 5.7953e-01 lowCoverage 1.0000e+00 lowCoverage 0.8663641 0.8664073 -0.02205813 5 0.725733 0.847022 -0.1212893 7.4381e-01 3.1660e-02 weaklyHypometh 1.0000e+00 6.4613e-01 insignificant 7.3785e-01 2.8954e-02 weaklyHypometh 1.0000e+00 0.68937976 insignificant -0.09585610 5.2765e-02 lowCoverage 9.5937e-01 lowCoverage 0.9036145 0.8004484 0.0935951 5 0.764281 0.8228242 -0.0585428 1.9756e-04 9.2442e-01 weaklyHypermeth 2.1474e-03 1.0000e+00 weaklyHypermeth 4.1320e-03 9.8729e-01 weaklyHypermeth 4.4430e-02 1.0000e+00 weaklyHypermeth 0.1024904 3.3438e-02 lowCoverage 3.7571e-01 lowCoverage 0.904298 0.8664073 -0.00080765 5 0.7255047 0.847022 -0.12151772 2.4659e-01 1.6940e-01 insignificant 1.0000e+00 1.00000000 insignificant 3.4613e-01 4.2932e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.02061282 6.2080e-01 lowCoverage 1.00000000 lowCoverage 0.7990868 0.8664073 -0.09232263 5 0.8007740 0.847022 -4.6248e-02 9.9449e-01 6.2286e-03 weaklyHypometh 1.0000e+00 6.1064e-02 weaklyHypometh 9.9252e-01 1.1483e-02 weaklyHypometh 1.0000e+00 1.3671e-01 insignificant -0.1231032 1.8163e-02 lowCoverage 2.7944e-01 lowCoverage chr17 24475650 24476650 50209 TIAF1 ENSG00000221995 0.8947766 170 6 0.7866090 224 6 0.8544871 139 5 0.9572511 123 5 0.8753307 101 5 0.9232928 272 6 0.9429480 178 5 0.8724793 176 6 0.85888009 109 6 0.965047 138 5 0.8651746 251 6 0.8401190 105 3 0.9362440 167 6 0.9444444 28 2 0.8110022 126 5 0.8957912 82 3 0.909033 123 3 0.9311955 213 5 0.9172837 299 6 0.9214450 244 6 0.960945 146 6 0.7333333 9 0 0.8847098 128 6 0.9722222 89 6 1.0000000 12 0 0.9520738 271 6 0.8786668 180 6 0.9521605 72 4 0.9302144 243 5 0.9312587 250 6 0.9375755 420 6 0.904060 321 6 0.8573340 197 6 0.88077449 213 6 0.7395597 197 4 0.9166667 25 2 0.8165064 102 6 0.7069928 311 6 0.9557588 156 6 0.9250094 264 6 0.9704129 78 4 0.8000000 77 6 0.9226933 123 5 0.9034773 0.8090492 0.8406237 0.9586301 0.8681516 0.9088595 0.9219798 0.89043929 0.8510391 0.9568852 0.8595218 0.8634967 0.9255441 0.92760863 0.8891788 0.88359565 0.88731330 0.9203651 0.90403492 0.9216918 0.9523711 0.8973779 0.8942722 0.9489247 0.9936044 0.9477663 0.8773180 0.9444444 0.9183413 0.9300259 0.9368043 0.9272203 0.8929324 0.8684854 0.76504791 0.84597005 0.8737261 0.8347645 0.9405193 0.9431853 0.9713674 0.7983871 0.9151064 2 0.8971848 0.9224661 -0.02395885 6 0.901656 0.924335 -0.02267951 0.9774343 3.1772e-03 weaklyHypometh 1.00000 0.264763 insignificant 0.991321 3.5338e-03 weaklyHypometh 1 0.392643 insignificant -0.0246266 0.28958542 lowCoverage 1.00000 lowCoverage 0.8971848 0.8095694 0.08604502 6 0.901656 0.7935576 0.10809838 1.2683e-05 5.9760e-01 weaklyHypermeth 1.4747e-04 1.0000e+00 weaklyHypermeth 3.8985e-02 5.6800e-01 weaklyHypermeth 3.2219e-01 1.0000e+00 insignificant 0.07550273 7.5150e-02 insignificant 7.4406e-01 insignificant 0.8971848 0.9068768 -0.02589504 6 0.901656 0.932115 -0.0304590 9.7877e-01 7.8839e-03 weaklyHypometh 1.0000e+00 2.5527e-01 insignificant 9.8233e-01 1.6390e-02 weaklyHypometh 1.0000e+00 0.49688888 insignificant -0.01963314 5.6601e-01 insignificant 1.0000e+00 insignificant 0.9224661 0.8095694 0.1135769 6 0.924335 0.7935576 0.1307779 4.2162e-06 7.8972e-01 weaklyHypermeth 5.9383e-05 1.0000e+00 weaklyHypermeth 1.5757e-03 9.7659e-01 weaklyHypermeth 2.0638e-02 1.0000e+00 weaklyHypermeth 0.1001293 3.1039e-02 lowCoverage 3.5677e-01 lowCoverage 0.922466 0.9068768 -0.00351075 6 0.9243354 0.932115 -0.00777947 8.9106e-01 9.2261e-02 insignificant 1.0000e+00 1.00000000 insignificant 8.5955e-01 1.2061e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.00499344 8.9324e-01 lowCoverage 1.00000000 lowCoverage 0.8095694 0.9068768 -0.14838849 6 0.7935576 0.932115 -1.3856e-01 9.7716e-01 2.3035e-03 weaklyHypometh 1.0000e+00 2.8091e-02 weaklyHypometh 9.9359e-01 6.5033e-03 weaklyHypometh 1.0000e+00 8.9086e-02 weaklyHypometh -0.0951359 6.3837e-02 insignificant 5.9108e-01 insignificant chr17 24475850 24476850 50210 TIAF1 ENSG00000221995 0.8947766 170 6 0.7866090 224 6 0.8544871 139 5 0.9572511 123 5 0.8753307 101 5 0.9232928 272 6 0.9429480 178 5 0.8724793 176 6 0.85888009 109 6 0.965047 138 5 0.8651746 251 6 0.8401190 105 3 0.9362440 167 6 0.9444444 28 2 0.8110022 126 5 0.8957912 82 3 0.909033 123 3 0.9311955 213 5 0.9172837 299 6 0.9214450 244 6 0.960945 146 6 0.7333333 9 0 0.8847098 128 6 0.9722222 89 6 1.0000000 12 0 0.9520738 271 6 0.8786668 180 6 0.9521605 72 4 0.9302144 243 5 0.9312587 250 6 0.9375755 420 6 0.904060 321 6 0.8573340 197 6 0.88077449 213 6 0.7395597 197 4 0.9166667 25 2 0.8165064 102 6 0.7069928 311 6 0.9557588 156 6 0.9250094 264 6 0.9704129 78 4 0.8000000 77 6 0.9226933 123 5 0.9034773 0.8090492 0.8406237 0.9586301 0.8681516 0.9088595 0.9219798 0.89043929 0.8510391 0.9568852 0.8595218 0.8634967 0.9255441 0.92760863 0.8891788 0.88359565 0.88731330 0.9203651 0.90403492 0.9216918 0.9523711 0.8973779 0.8942722 0.9489247 0.9936044 0.9477663 0.8773180 0.9444444 0.9183413 0.9300259 0.9368043 0.9272203 0.8929324 0.8684854 0.76504791 0.84597005 0.8737261 0.8347645 0.9405193 0.9431853 0.9713674 0.7983871 0.9151064 2 0.8971848 0.9224661 -0.02395885 6 0.901656 0.924335 -0.02267951 0.9774343 3.1772e-03 weaklyHypometh 1.00000 0.264763 insignificant 0.991321 3.5338e-03 weaklyHypometh 1 0.392643 insignificant -0.0246266 0.28958542 lowCoverage 1.00000 lowCoverage 0.8971848 0.8095694 0.08604502 6 0.901656 0.7935576 0.10809838 1.2683e-05 5.9760e-01 weaklyHypermeth 1.4747e-04 1.0000e+00 weaklyHypermeth 3.8985e-02 5.6800e-01 weaklyHypermeth 3.2219e-01 1.0000e+00 insignificant 0.07550273 7.5150e-02 insignificant 7.4406e-01 insignificant 0.8971848 0.9068768 -0.02589504 6 0.901656 0.932115 -0.0304590 9.7877e-01 7.8839e-03 weaklyHypometh 1.0000e+00 2.5527e-01 insignificant 9.8233e-01 1.6390e-02 weaklyHypometh 1.0000e+00 0.49688888 insignificant -0.01963314 5.6601e-01 insignificant 1.0000e+00 insignificant 0.9224661 0.8095694 0.1135769 6 0.924335 0.7935576 0.1307779 4.2162e-06 7.8972e-01 weaklyHypermeth 5.9383e-05 1.0000e+00 weaklyHypermeth 1.5757e-03 9.7659e-01 weaklyHypermeth 2.0638e-02 1.0000e+00 weaklyHypermeth 0.1001293 3.1039e-02 lowCoverage 3.5677e-01 lowCoverage 0.922466 0.9068768 -0.00351075 6 0.9243354 0.932115 -0.00777947 8.9106e-01 9.2261e-02 insignificant 1.0000e+00 1.00000000 insignificant 8.5955e-01 1.2061e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.00499344 8.9324e-01 lowCoverage 1.00000000 lowCoverage 0.8095694 0.9068768 -0.14838849 6 0.7935576 0.932115 -1.3856e-01 9.7716e-01 2.3035e-03 weaklyHypometh 1.0000e+00 2.8091e-02 weaklyHypometh 9.9359e-01 6.5033e-03 weaklyHypometh 1.0000e+00 8.9086e-02 weaklyHypometh -0.0951359 6.3837e-02 insignificant 5.9108e-01 insignificant chr17 24490650 24491650 50213 TIAF1 ENSG00000221995 0.1662131 172 6 0.1927323 478 8 0.2044735 509 7 0.2442834 160 5 0.1869437 415 8 0.3079543 405 7 0.1927959 525 8 0.1229352 443 7 0.08639243 442 7 0.121895 354 7 0.2544313 475 9 0.2512945 285 7 0.0111840 397 7 0.0435900 236 5 0.2699132 477 7 0.0579950 338 7 0.136680 150 3 0.1520395 238 5 0.1693521 875 7 0.2224502 320 7 0.205154 305 9 0.0281319 167 5 0.1607837 211 7 0.2358942 364 8 0.0433405 146 5 0.1418854 634 9 0.2319445 588 7 0.1483918 235 7 0.0655437 429 7 0.1679334 607 7 0.1443198 921 7 0.193545 438 7 0.0000000 347 7 0.00000000 276 7 0.1250000 439 5 0.1250000 23 2 0.0290457 312 8 0.0370370 544 7 0.0610087 301 6 0.0141026 227 7 0.1503759 149 5 0.0262951 196 5 0.2086822 216 5 0.0801597 0.0358394 0.0795461 0.0427805 0.0903706 0.1229477 0.0998916 0.07623254 0.0546347 0.0464093 0.0652507 0.0664782 0.0153119 0.04874413 0.0610043 0.08343572 0.03856747 0.0426955 0.03265217 0.0475598 0.0680836 0.0369505 0.0891558 0.1099560 0.0608099 0.0514666 0.0561470 0.0329949 0.0980718 0.0375720 0.0363615 0.1450031 0.0000000 0.0000000 0.00000000 0.00000000 0.0158931 0.0000000 0.0212500 0.0252405 0.0149606 0.0444415 0.0990139 5 0.0651157 0.0669970 0.00228104 7 0.214421 0.161216 0.05320435 0.0815394 9.6441e-01 insignificant 1.00000 1.000000 insignificant 0.079560 9.6287e-01 insignificant 1 1.000000 insignificant 0.0225384 0.40756882 insignificant 1.00000 insignificant 0.0651126 0.0041216 0.06692958 7 0.229196 0.0489259 0.18027005 1.0556e-16 1.0000e+00 weaklyHypermeth 2.9322e-15 1.0000e+00 weaklyHypermeth 2.3241e-11 9.9999e-01 weaklyHypermeth 1.3671e-09 1.0000e+00 weaklyHypermeth 0.11709697 2.1458e-03 weaklyHypermeth 4.5656e-02 weaklyHypermeth 0.0651126 0.0431589 0.02219818 6 0.229196 0.101903 0.1272931 1.9837e-04 9.9767e-01 weaklyHypermeth 8.2656e-03 1.0000e+00 weaklyHypermeth 3.4785e-04 9.9992e-01 weaklyHypermeth 2.0462e-02 1.00000000 weaklyHypermeth 0.07768451 1.1208e-01 insignificant 1.0000e+00 insignificant 0.0670369 0.0041216 0.0661222 7 0.177338 0.0489259 0.1284119 9.0474e-10 9.9999e-01 weaklyHypermeth 1.9250e-08 1.0000e+00 weaklyHypermeth 1.5689e-08 9.9770e-01 weaklyHypermeth 6.8212e-07 1.0000e+00 weaklyHypermeth 0.0945586 1.0136e-02 weaklyHypermeth 1.5357e-01 insignificant 0.067037 0.0431589 0.02125979 6 0.1773379 0.101903 0.07543500 1.7403e-02 9.9559e-01 weaklyHypermeth 3.7028e-01 1.00000000 insignificant 1.0486e-02 9.9936e-01 weaklyHypermeth 3.3825e-01 1.0000000 insignificant 0.05514612 2.4075e-01 insignificant 1.00000000 insignificant 0.0041216 0.0431589 -0.03946165 6 0.0489259 0.101903 -5.2977e-02 9.9858e-01 4.3963e-03 weaklyHypometh 1.0000e+00 4.8848e-02 weaklyHypometh 9.9657e-01 2.1852e-02 weaklyHypometh 1.0000e+00 2.2873e-01 insignificant -0.0394125 4.0536e-01 insignificant 1.0000e+00 insignificant chr17 24490950 24491950 50214 TIAF1 ENSG00000221995 0.2908749 469 10 0.2665878 762 12 0.2711124 677 11 0.3146443 354 9 0.2823574 531 11 0.4040408 856 11 0.2856091 755 12 0.2293866 635 11 0.19818755 643 11 0.219329 517 11 0.3452917 715 13 0.2884524 401 11 0.0961922 628 11 0.1358304 362 7 0.2975813 685 11 0.2054995 462 11 0.189845 246 6 0.2164435 565 9 0.2294411 1360 11 0.2975497 632 11 0.335503 433 13 0.1041562 210 9 0.2590920 433 11 0.3575991 438 12 0.0803383 169 7 0.2531928 889 13 0.2980587 852 11 0.2054447 342 11 0.2160505 717 11 0.2481229 872 11 0.2356676 1385 11 0.334966 715 11 0.0000000 556 11 0.00940894 510 11 0.0909091 469 7 0.0925926 82 6 0.0207469 466 12 0.0274299 867 11 0.1196302 646 10 0.0819264 494 11 0.1976227 361 9 0.0824958 599 9 0.2231050 409 9 0.1896411 0.1321926 0.1734739 0.1391485 0.1824256 0.2348584 0.2110163 0.18493257 0.1463406 0.1355924 0.1904933 0.1522449 0.0689257 0.15447042 0.1244917 0.19854844 0.11569909 0.1077076 0.10956358 0.1385147 0.2141738 0.0890082 0.1842394 0.2488581 0.1086068 0.1502419 0.1415455 0.0990129 0.2029299 0.1274251 0.1244360 0.2703770 0.0000000 0.0067850 0.00000000 0.00465069 0.0112943 0.0009734 0.0622043 0.0574361 0.0600309 0.0750847 0.1192503 9 0.1777234 0.1796110 -0.00973518 11 0.279228 0.252892 0.02633643 0.2624598 7.2210e-01 insignificant 1.00000 1.000000 insignificant 0.209915 9.0290e-01 insignificant 1 1.000000 insignificant 0.0091968 0.75821245 insignificant 1.00000 insignificant 0.1778595 0.0050847 0.17309107 11 0.294411 0.0379701 0.25644122 5.2116e-39 1.0000e+00 weaklyHypermeth 5.7907e-37 1.0000e+00 weaklyHypermeth 1.0395e-20 1.0000e+00 weaklyHypermeth 5.1974e-18 1.0000e+00 weaklyHypermeth 0.21303155 1.5492e-07 hypermethylated 9.6827e-06 hypermethylated 0.1778595 0.0900757 0.13030630 10 0.294411 0.140077 0.1543345 2.0573e-11 9.9999e-01 weaklyHypermeth 5.1432e-09 1.0000e+00 weaklyHypermeth 1.2915e-10 1.0000e+00 weaklyHypermeth 3.2289e-08 1.00000000 weaklyHypermeth 0.11225680 1.3392e-02 weaklyHypermeth 3.9092e-01 insignificant 0.1796833 0.0050847 0.1814872 11 0.270956 0.0379701 0.2329855 1.3236e-28 1.0000e+00 weaklyHypermeth 1.0181e-26 1.0000e+00 weaklyHypermeth 6.7416e-16 9.9999e-01 weaklyHypermeth 2.4193e-13 1.0000e+00 weaklyHypermeth 0.2038348 4.2511e-06 hypermethylated 2.1255e-04 hypermethylated 0.179683 0.0900757 0.13778681 10 0.2709556 0.140077 0.13087877 5.6038e-09 9.9997e-01 weaklyHypermeth 5.6038e-07 1.00000000 weaklyHypermeth 1.8511e-07 1.0000e+00 weaklyHypermeth 3.7021e-05 1.0000000 weaklyHypermeth 0.10306001 2.3427e-02 weaklyHypermeth 0.77397739 insignificant 0.0050847 0.0900757 -0.08215916 10 0.0379701 0.140077 -1.0211e-01 9.9999e-01 2.0331e-12 weaklyHypometh 1.0000e+00 1.1959e-10 weaklyHypometh 9.9998e-01 4.1914e-07 weaklyHypometh 1.0000e+00 5.9877e-05 weaklyHypometh -0.1007748 2.2626e-02 weaklyHypometh 3.1424e-01 insignificant chr17 24499650 24500650 50216 TIAF1 ENSG00000221995 0.0000000 89 8 0.0178571 115 8 0.0023585 109 4 0.0000000 51 4 0.0000000 199 8 0.0250000 82 7 0.0312500 148 7 0.1234568 113 6 0.00000000 133 4 0.000000 170 7 0.0000000 105 7 0.0012500 224 8 0.0000000 152 8 0.0000000 34 6 0.0026455 186 8 0.0078125 238 4 0.000000 264 2 0.0000000 85 6 0.1179622 179 7 0.0000000 53 7 0.010417 58 5 0.2000000 6 1 0.0354167 74 7 0.1250000 40 2 0.0000000 6 0 0.0941558 168 8 0.1269841 185 7 0.0729167 40 5 0.1111111 141 8 0.0000000 149 8 0.0037037 214 8 0.000000 53 7 0.0000000 72 7 0.01250000 123 8 0.0000000 52 3 0.0000000 3 0 0.1333333 54 7 0.0000000 108 8 0.1388889 36 2 0.0462963 78 6 0.0000000 51 6 0.0000000 93 4 0.0625000 19 0 0.0000000 0.0051020 0.0067385 0.0000000 0.0000000 0.0357143 0.0000000 0.00000000 0.0000000 0.0000000 0.0000000 0.0035714 0.0000000 0.00369213 0.0042517 0.01144416 0.00028345 0.0022203 0.00649351 0.0000000 0.0000000 0.0792857 0.0577381 0.1785714 0.0078571 0.0063776 0.0255102 0.1398810 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0000000 0.00000000 0.00000000 0.0000000 0.0000000 0.0000000 0.0029762 0.0000000 0.0000000 0.0000000 0 0.0054985 0.0132509 -0.00840257 8 0.153383 0.110436 0.04294737 0.8594731 2.5883e-01 insignificant 1.00000 1.000000 insignificant 0.897943 2.0015e-01 insignificant 1 1.000000 insignificant -0.0484958 0.03509900 weaklyHypometh 1.00000 insignificant 0.0051338 0.0097087 -0.00371349 8 0.059315 0.1198982 -0.06058318 9.1840e-01 8.0387e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3886e-01 9.4627e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00782592 7.4856e-01 insignificant 1.0000e+00 insignificant 0.0051338 0.0254545 -0.00978510 6 0.059315 0.076129 -0.0168145 9.5746e-01 8.4859e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7770e-01 8.8048e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.03305740 2.7456e-01 lowCoverage 1.0000e+00 lowCoverage 0.0123894 0.0097087 0.0048577 8 0.067151 0.1198982 -0.0527469 8.0454e-01 6.2143e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.2252e-01 9.1043e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0406698 1.8777e-01 insignificant 1.0000e+00 insignificant 0.013263 0.0252708 -0.00561415 6 0.1604361 0.068517 0.09191957 8.3764e-01 6.9436e-01 insignificant 1.0000e+00 1.00000000 insignificant 6.6552e-01 8.0487e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.01543836 6.4137e-01 lowCoverage 1.00000000 lowCoverage 0.0097087 0.0254545 0.00096441 6 0.1198982 0.076129 4.3769e-02 9.9646e-01 9.9244e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9979e-01 9.9851e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0252315 4.7398e-01 lowCoverage 1.0000e+00 lowCoverage chr17 24729250 24730250 50233 NUFIP2 ENSG00000108256 0.7641689 393 8 0.6952631 215 9 0.6366133 196 9 0.7470513 231 8 0.8293651 39 5 0.7729004 316 8 0.4954004 55 5 0.5966489 95 5 0.64145735 61 5 0.746753 47 3 0.7888783 144 5 0.4000000 14 1 0.8358390 76 5 0.7535560 53 5 0.6297619 71 5 0.5972222 16 1 NA 0 0 0.8245217 260 8 0.7696581 100 3 0.6941095 349 9 0.895833 37 3 0.5714286 28 2 0.6547679 184 8 0.5266249 52 3 0.6060606 23 2 0.7561328 199 9 0.5291667 59 3 0.5634921 31 3 0.7975661 84 5 0.7240471 260 9 0.7212448 213 9 0.644981 374 9 0.6422910 200 9 0.54821429 51 5 0.7351838 258 9 1.0000000 1 0 0.5272386 72 4 0.6248865 242 9 0.7816829 285 8 0.8226586 278 8 0.7004399 285 8 0.7084832 199 8 0.7511770 363 9 0.7741832 0.7437345 0.7435714 0.8907730 0.8921429 0.8071104 0.6217208 0.82465097 0.7380641 0.8490909 0.8242464 0.6533333 0.9261944 0.78058442 0.7744444 0.85750000 NA 0.8446292 0.82771368 0.8813333 0.8766667 0.8549713 0.8138437 0.7223847 0.8934128 0.8507937 0.7081250 0.7909524 0.8541778 0.7984015 0.7927879 0.8701190 0.6916742 0.6342857 0.77361605 0.78453383 0.6744737 0.8047009 0.8991453 0.8495091 0.8303299 0.8596714 0.7758905 3 0.7729769 0.7687824 0.00550116 8 0.697420 0.685851 0.01156901 0.6166484 9.2208e-01 insignificant 1.00000 1.000000 insignificant 0.551898 9.1825e-01 insignificant 1 1.000000 insignificant 0.0298003 0.49242408 insignificant 1.00000 insignificant 0.7729769 0.7160194 0.06289080 8 0.697420 0.5763850 0.12103471 5.4156e-03 9.8744e-01 weaklyHypermeth 3.8961e-02 1.0000e+00 weaklyHypermeth 3.2443e-02 9.9969e-01 weaklyHypermeth 2.8211e-01 1.0000e+00 insignificant 0.01611004 8.3810e-01 insignificant 1.0000e+00 insignificant 0.7730444 0.7801418 -0.01540919 8 0.683080 0.687039 -0.0039594 7.8457e-01 3.2006e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.3511e-01 4.3038e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.05714258 1.2409e-01 insignificant 1.0000e+00 insignificant 0.7687824 0.7160194 0.0548407 8 0.685851 0.5763850 0.1094657 3.9966e-02 9.5446e-01 weaklyHypermeth 2.4979e-01 1.0000e+00 insignificant 1.3839e-01 9.8167e-01 insignificant 8.9286e-01 1.0000e+00 insignificant -0.0136902 8.6595e-01 insignificant 1.0000e+00 insignificant 0.769080 0.7801418 -0.02043199 8 0.6607796 0.687039 -0.02625933 9.7912e-01 8.5585e-02 insignificant 1.0000e+00 1.00000000 insignificant 9.7402e-01 2.9340e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.08694284 4.8237e-02 weaklyHypometh 1.00000000 insignificant 0.7176039 0.7801418 -0.07516566 8 0.5820657 0.687039 -1.0497e-01 9.9849e-01 4.5157e-03 weaklyHypometh 1.0000e+00 4.9084e-02 weaklyHypometh 9.9916e-01 1.1779e-02 weaklyHypometh 1.0000e+00 1.3857e-01 insignificant -0.0732526 3.6303e-01 insignificant 1.0000e+00 insignificant chr17 24968950 24969950 50235 CORO6 ENSG00000167549 0.1111437 1605 47 0.1061057 1600 48 0.2460152 1903 48 0.0804379 1647 38 0.1786943 1074 42 0.1916515 2558 47 0.1097721 1703 43 0.1832396 1473 43 0.14980702 2139 43 0.162199 2391 43 0.1889806 1410 43 0.1153331 1758 42 0.1675400 1947 43 0.1913772 1032 23 0.1219512 2147 43 0.1195815 1918 42 0.146074 1496 38 0.1492766 1992 38 0.1821285 1776 42 0.2407591 1685 48 0.130580 712 42 0.0771528 1324 39 0.1399895 1424 48 0.0956990 1022 42 0.2113993 816 38 0.2766269 2126 48 0.1137299 1267 43 0.1418473 1239 43 0.1731300 1343 43 0.1373801 2440 48 0.2556325 2709 48 0.149912 1930 47 0.2009483 1264 48 0.29521334 1122 42 0.1899249 1424 30 0.2458018 654 31 0.2941776 667 40 0.1914207 1440 48 0.1629163 2059 42 0.1349728 1747 42 0.0902702 1299 43 0.1046824 1794 41 0.1726577 1539 41 0.1093605 0.0942731 0.2776667 0.0877835 0.1688100 0.1940004 0.1141115 0.18540653 0.1311443 0.1555680 0.1651105 0.1272200 0.1736248 0.14300089 0.1164027 0.11935803 0.15927459 0.1424954 0.18164163 0.2798097 0.1415856 0.0762597 0.1423744 0.1122061 0.2176771 0.2954102 0.1068374 0.1124503 0.1337949 0.1203161 0.2255637 0.1295083 0.1912727 0.2538622 0.18599444 0.20909142 0.3481207 0.1802320 0.1261218 0.1015153 0.0951929 0.1131191 0.1368558 38 0.1464314 0.1546847 0.00091828 44 0.175018 0.185846 -0.01082841 0.3499974 9.6643e-01 insignificant 1.00000 1.000000 insignificant 0.090304 9.9967e-01 insignificant 1 1.000000 insignificant -0.0014866 0.94219876 insignificant 1.00000 insignificant 0.1464072 0.2235079 -0.04866684 44 0.169510 0.2090087 -0.03949917 8.2501e-01 6.6476e-38 weaklyHypometh 1.0000e+00 6.6476e-35 weaklyHypometh 7.3722e-01 2.8652e-09 weaklyHypometh 1.0000e+00 9.4716e-07 weaklyHypometh -0.07914438 8.7275e-03 weaklyHypometh 1.4176e-01 insignificant 0.1463401 0.1269258 0.04036016 41 0.158825 0.137868 0.0209568 3.9636e-05 9.5440e-01 weaklyHypermeth 2.3315e-03 1.0000e+00 weaklyHypermeth 1.8588e-05 9.9970e-01 weaklyHypermeth 2.1119e-03 1.00000000 weaklyHypermeth 0.02400354 2.4028e-01 insignificant 1.0000e+00 insignificant 0.1546262 0.2233557 -0.0500486 48 0.190408 0.2033590 -0.0129505 9.8364e-01 1.7773e-19 weaklyHypometh 1.0000e+00 1.7773e-16 weaklyHypometh 9.9092e-01 4.4605e-09 weaklyHypometh 1.0000e+00 2.2302e-06 weaklyHypometh -0.0776578 1.3280e-02 weaklyHypometh 1.8971e-01 insignificant 0.154484 0.1269559 0.03670746 41 0.1687648 0.140520 0.02824512 2.5960e-03 7.4742e-01 weaklyHypermeth 7.4172e-02 1.00000000 weaklyHypermeth 2.9163e-02 7.7718e-01 weaklyHypermeth 8.3322e-01 1.0000000 insignificant 0.02549009 3.0328e-01 insignificant 1.00000000 insignificant 0.2238487 0.1269258 0.08337550 41 0.2326701 0.137868 9.4802e-02 3.9134e-15 1.0000e+00 weaklyHypermeth 1.3045e-12 1.0000e+00 weaklyHypermeth 5.5952e-07 1.0000e+00 weaklyHypermeth 1.3988e-04 1.0000e+00 weaklyHypermeth 0.1031479 3.2195e-03 weaklyHypermeth 8.2552e-02 weaklyHypermeth chr17 24990650 24991650 50236 CORO6 ENSG00000167549 0.8554348 143 6 0.6951697 82 6 0.5325397 38 6 0.6419572 95 5 0.5250000 47 5 0.6910714 84 6 0.6083333 52 6 0.6619309 70 6 0.71771284 36 3 0.779592 46 6 0.7133838 132 6 0.6666667 11 2 0.7495370 67 6 0.5805995 71 6 0.7716450 42 3 0.8888889 20 2 1.000000 2 0 0.7713315 155 4 0.8793860 37 1 0.6933847 50 5 0.655556 21 2 0.8800000 19 2 0.5591787 61 3 0.7797980 31 3 0.8551948 62 4 0.6684499 91 4 0.6535948 35 3 0.6686508 33 1 0.6961219 76 6 0.7430556 67 6 0.7035354 70 6 0.662963 38 5 0.7011416 105 6 0.59858388 67 6 0.5802696 100 6 0.7500000 8 0 0.6515100 91 6 0.6819153 65 6 0.8379630 64 5 0.6888278 98 5 0.7561293 122 6 0.8629630 52 5 0.7294372 88 5 0.7868852 0.7266855 0.5148322 0.7161648 0.7480874 0.8269321 0.6565574 0.80989912 0.7929884 0.7634660 0.7539742 0.8561982 0.8048725 0.70116275 0.8827620 0.90163934 0.89522343 0.7654922 0.94068162 0.7855280 0.7256831 0.7558575 0.6613210 0.7309509 0.8215350 0.7098934 0.7539167 0.7058938 0.7840466 0.7807377 0.8028316 0.6921676 0.6793964 0.7129005 0.61206204 0.74590164 0.6431913 0.7496752 0.8492714 0.7076202 0.7235711 0.8752277 0.7611241 0 0.7380952 0.7019868 0.01800899 6 0.620200 0.739633 -0.11943309 0.4992103 9.7598e-01 insignificant 1.00000 1.000000 insignificant 0.346119 8.1691e-01 insignificant 1 1.000000 insignificant 0.0106700 0.77941672 lowCoverage 1.00000 lowCoverage 0.7368006 0.6490826 0.07911569 6 0.690711 0.6472255 0.04348593 3.5189e-02 9.6713e-01 weaklyHypermeth 2.1993e-01 1.0000e+00 insignificant 4.4334e-02 9.8008e-01 weaklyHypermeth 3.4368e-01 1.0000e+00 insignificant 0.06060818 1.2655e-01 lowCoverage 1.0000e+00 lowCoverage 0.7372549 0.7688679 -0.00021625 5 0.686773 0.801578 -0.1148055 8.6924e-01 4.0258e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.1107e-01 6.1162e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.05388582 2.3370e-01 lowCoverage 1.0000e+00 lowCoverage 0.7014925 0.6481481 0.0629225 6 0.696239 0.6375049 0.0587342 4.2970e-02 9.9511e-01 weaklyHypermeth 2.6525e-01 1.0000e+00 insignificant 8.2646e-02 9.9300e-01 insignificant 6.1219e-01 1.0000e+00 insignificant 0.0499381 1.9897e-01 lowCoverage 1.0000e+00 lowCoverage 0.701493 0.7677725 -0.02070292 5 0.6962391 0.735437 -0.03919841 9.2079e-01 3.3571e-01 insignificant 1.0000e+00 1.00000000 insignificant 8.3364e-01 4.9350e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.06455587 1.5755e-01 lowCoverage 1.00000000 lowCoverage 0.6497696 0.7683215 -0.08250716 5 0.6892899 0.773232 -8.3942e-02 9.9999e-01 5.1555e-03 weaklyHypometh 1.0000e+00 5.3703e-02 weaklyHypometh 9.9998e-01 2.8326e-02 weaklyHypometh 1.0000e+00 2.7771e-01 insignificant -0.1144940 2.5661e-02 weaklyHypometh 3.3340e-01 insignificant chr17 25095550 25096550 50249 ENSG00000222858 0.6830357 239 5 0.8153565 236 5 0.7815657 44 3 0.7500000 253 5 0.8450292 77 5 0.7537391 200 5 0.6211640 142 5 0.7043590 105 5 0.83333333 33 5 0.816667 48 5 0.7472110 240 6 0.6676923 49 5 0.7542484 75 5 0.6735885 78 5 0.7512035 92 5 0.7619048 30 3 0.923893 2708 3 0.7355088 184 5 0.7671795 102 5 0.8015028 113 5 0.558333 23 2 0.7846154 41 3 0.6212885 124 5 0.8393939 86 5 0.7450877 241 5 0.7440749 229 6 0.6388889 44 3 0.7099868 41 5 0.6357143 55 4 0.7406180 259 6 0.7919267 440 6 0.680051 205 6 0.7209325 143 5 0.73015873 109 5 0.6832080 196 6 0.5734127 143 5 0.7098286 176 6 0.6987260 209 6 0.7886457 261 5 0.8005360 226 5 0.7668786 401 6 0.7527778 84 5 0.7374693 255 5 0.7756915 0.8508421 0.7459447 0.7846405 0.8542828 0.7820181 0.6954435 0.74696186 0.8789916 0.8799020 0.8144608 0.7355656 0.8235154 0.75656910 0.7744974 0.77100840 0.80764507 0.7939028 0.78874208 0.8442311 0.5091176 0.8570136 0.5726149 0.8831016 0.7991244 0.8129627 0.7931373 0.6924486 0.6924790 0.8125221 0.8439622 0.7965146 0.7034419 0.9200280 0.82715170 0.76505602 0.8154565 0.8448157 0.8214959 0.8669267 0.8331978 0.8317810 0.8315102 3 0.8694532 0.8215884 0.01214571 5 0.755490 0.730165 0.02532495 0.1047065 2.3518e-01 insignificant 1.00000 1.000000 insignificant 0.184466 7.8019e-01 insignificant 1 1.000000 insignificant 0.0519108 0.08298014 lowCoverage 1.00000 lowCoverage 0.8694532 0.8420513 -0.00875112 5 0.755490 0.6815942 0.07389547 9.5521e-04 4.7162e-02 weaklyHypometh 8.3238e-03 1.0000e+00 weaklyHypometh 1.2092e-01 2.5348e-01 insignificant 7.9552e-01 1.0000e+00 insignificant 0.07336466 2.6821e-02 lowCoverage 3.2709e-01 lowCoverage 0.8694532 0.8622657 -0.03759245 5 0.755490 0.772441 -0.0169518 8.4349e-01 8.1610e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 6.9635e-01 8.4969e-02 insignificant 1.0000e+00 1.00000000 insignificant -0.00985238 6.1798e-01 lowCoverage 1.0000e+00 lowCoverage 0.8215884 0.8420513 -0.0120384 5 0.730165 0.6815942 0.0485705 1.6091e-01 1.0989e-01 insignificant 8.5592e-01 1.0000e+00 insignificant 5.6977e-01 3.8438e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0214539 5.3160e-01 lowCoverage 1.0000e+00 lowCoverage 0.821588 0.8622657 -0.04750126 5 0.7301647 0.772441 -0.04227675 9.5578e-01 4.4279e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant 9.3492e-01 9.4196e-02 insignificant 1.0000e+00 1.0000000 insignificant -0.06176318 3.4071e-02 lowCoverage 0.89660445 lowCoverage 0.8420513 0.8622657 -0.03051883 5 0.6815942 0.772441 -9.0847e-02 8.4989e-01 7.5761e-02 insignificant 1.0000e+00 4.7351e-01 insignificant 8.7240e-01 2.1315e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0832170 1.5025e-02 weaklyHypometh 2.3850e-01 insignificant chr17 25136250 25137250 50250 SSH2 ENSG00000141298 0.6109602 153 9 0.5087659 154 9 0.6074561 63 7 0.5716620 128 9 0.7563492 34 3 0.6187768 184 9 0.5153439 59 9 0.6014493 105 7 0.47579365 63 7 0.548677 56 8 0.6755075 226 9 0.4960317 35 1 0.6051146 90 9 0.7142857 39 5 0.5960317 48 3 0.5555556 23 2 0.620370 30 2 0.6898472 144 9 0.6042328 63 9 0.6712682 132 9 0.544444 32 3 0.5981481 43 6 0.6357679 87 9 0.6358025 46 7 0.3214286 30 4 0.5998024 158 9 0.5597884 68 8 0.6200000 20 2 0.5417638 90 9 0.5776506 112 9 0.5384921 60 8 0.579044 202 9 0.5404080 98 9 0.54753086 87 9 0.5115440 97 9 0.5185185 18 0 0.5507729 67 7 0.6624579 84 7 0.6019166 99 9 0.6232852 142 9 0.6653389 157 9 0.5617284 88 9 0.6139847 173 7 0.6303038 0.5212572 0.6170556 0.6001070 0.7530997 0.6384755 0.5284816 0.62792248 0.4920485 0.5599281 0.6921802 0.5080863 0.6180892 0.73315364 0.6231806 0.55345912 0.63364780 0.7024959 0.63544474 0.6914332 0.5783019 0.6246855 0.6484892 0.6540881 0.3285380 0.6206677 0.5887466 0.6053414 0.5556032 0.6014367 0.5599730 0.6018492 0.5526859 0.5761006 0.53410112 0.54402516 0.5719958 0.6772441 0.6322624 0.6440386 0.6851280 0.5718029 0.6356539 0 0.6309459 0.6118143 0.00891028 9 0.603539 0.586481 0.01705811 0.2874385 7.7425e-01 insignificant 1.00000 1.000000 insignificant 0.202513 8.5868e-01 insignificant 1 1.000000 insignificant 0.0394963 0.19121007 insignificant 1.00000 insignificant 0.6309459 0.5853659 0.05657592 7 0.603539 0.5445653 0.05897344 6.8651e-03 9.6466e-01 weaklyHypermeth 4.8346e-02 1.0000e+00 weaklyHypermeth 2.3346e-02 8.1583e-01 weaklyHypermeth 2.1255e-01 1.0000e+00 insignificant 0.04696862 1.1977e-01 insignificant 1.0000e+00 insignificant 0.6309459 0.6479514 -0.02908331 9 0.603539 0.617292 -0.0137534 6.8386e-01 2.0864e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.0109e-01 4.1933e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.01107677 6.4587e-01 insignificant 1.0000e+00 insignificant 0.6118143 0.5853659 0.0546170 7 0.586481 0.5445653 0.0419153 1.5665e-02 8.1938e-01 weaklyHypermeth 1.0676e-01 1.0000e+00 insignificant 1.1090e-01 7.0251e-01 insignificant 7.7554e-01 1.0000e+00 insignificant 0.0074724 8.2352e-01 insignificant 1.0000e+00 insignificant 0.611814 0.6479514 -0.03183700 9 0.5864806 0.617292 -0.03081148 8.5482e-01 2.7295e-01 insignificant 1.0000e+00 1.00000000 insignificant 8.5213e-01 3.9226e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.05057303 1.0564e-01 insignificant 1.00000000 insignificant 0.5853659 0.6479514 -0.08395126 7 0.5445653 0.617292 -7.2727e-02 8.4879e-01 2.0816e-03 weaklyHypometh 1.0000e+00 2.6350e-02 weaklyHypometh 7.4386e-01 9.6227e-03 weaklyHypometh 1.0000e+00 1.2181e-01 insignificant -0.0580454 6.8613e-02 insignificant 6.2375e-01 insignificant chr17 25136750 25137750 50251 SSH2 ENSG00000141298 0.6373642 161 10 0.4778893 169 10 0.5867105 68 8 0.5787815 142 10 0.7807143 41 4 0.6193991 192 10 0.5138095 71 10 0.5841615 119 8 0.47107143 70 8 0.560476 62 9 0.6679567 251 10 0.4464286 39 1 0.6130242 109 10 0.7142857 39 5 0.6078571 55 4 0.5500000 25 2 0.586905 37 3 0.6208625 148 9 0.6009524 91 10 0.6708081 144 10 0.590000 36 3 0.5981481 43 6 0.6388578 93 10 0.6322222 51 8 0.3214286 30 4 0.5898221 162 9 0.5788095 72 8 0.6000000 22 2 0.5447303 104 10 0.5448855 116 9 0.5132143 67 9 0.587806 211 10 0.5551172 114 10 0.50944444 99 10 0.5603896 133 10 0.5666667 19 0 0.5956956 74 8 0.6962121 90 8 0.5972805 117 10 0.6466710 149 10 0.6613050 165 10 0.5922222 103 10 0.6253135 184 8 0.6513983 0.4935626 0.5983439 0.6037924 0.7743842 0.6373138 0.5260263 0.61073704 0.4865764 0.5691297 0.6842336 0.4642857 0.6237894 0.71436531 0.6310345 0.54885057 0.60365353 0.6419359 0.62992611 0.6892982 0.6146552 0.6207512 0.6500563 0.6494253 0.3501336 0.6102653 0.6026478 0.5962602 0.5569675 0.5711404 0.5363300 0.6074369 0.5643078 0.5408046 0.57426482 0.58333333 0.6088928 0.7050679 0.6256497 0.6624097 0.6799446 0.5972222 0.6435520 0 0.6227250 0.6097319 0.00667760 9 0.598087 0.585460 0.01262714 0.3536693 7.5980e-01 insignificant 1.00000 1.000000 insignificant 0.269339 8.2601e-01 insignificant 1 1.000000 insignificant 0.0328125 0.28848502 insignificant 1.00000 insignificant 0.6227250 0.6181474 0.01890857 8 0.598087 0.5708780 0.02720883 1.4872e-02 6.4579e-01 weaklyHypermeth 9.8491e-02 1.0000e+00 weaklyHypermeth 4.5445e-02 3.8778e-01 weaklyHypermeth 3.4428e-01 1.0000e+00 insignificant 0.01388527 6.6828e-01 insignificant 1.0000e+00 insignificant 0.6227250 0.6532033 -0.04250552 10 0.598087 0.626749 -0.0286625 7.8765e-01 1.0484e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.1907e-01 2.1451e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.03008556 1.9880e-01 insignificant 1.0000e+00 insignificant 0.6097319 0.6181474 0.0359692 7 0.585460 0.5708780 0.0145817 3.1069e-02 5.4813e-01 weaklyHypermeth 1.9693e-01 1.0000e+00 insignificant 1.7929e-01 4.1723e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0189272 6.0091e-01 insignificant 1.0000e+00 insignificant 0.609732 0.6532033 -0.03791606 9 0.5854596 0.626749 -0.04128965 9.1411e-01 1.7313e-01 insignificant 1.0000e+00 1.00000000 insignificant 9.1367e-01 2.5931e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.06289804 3.8082e-02 weaklyHypometh 0.97645769 insignificant 0.6181474 0.6532033 -0.05955808 8 0.5708780 0.626749 -5.5871e-02 8.0398e-01 4.1063e-03 weaklyHypometh 1.0000e+00 4.6444e-02 weaklyHypometh 5.7781e-01 1.9546e-02 weaklyHypometh 1.0000e+00 2.1271e-01 insignificant -0.0439708 1.7179e-01 insignificant 1.0000e+00 insignificant chr17 26860150 26861150 50273 RAB11FIP4 ENSG00000131242 0.8065027 303 6 0.6785488 176 7 0.7610411 186 7 0.8739171 332 7 0.8076413 148 7 0.8003844 397 7 0.7948664 173 7 0.9167321 202 7 0.83464529 242 7 0.900156 202 6 0.8036616 194 7 0.7796875 148 6 0.6912943 209 6 0.5748810 167 6 0.6766234 226 6 0.7286423 69 5 0.750265 62 4 0.8335136 353 7 0.8688423 195 7 0.8015619 294 7 0.864121 80 6 0.6724554 158 4 0.8285619 262 7 0.9010600 135 7 0.7965335 103 6 0.7901000 256 7 0.5857902 147 7 0.8382911 109 6 0.7180777 175 7 0.8741884 234 7 0.8318909 299 7 0.790327 244 7 0.4576068 183 7 0.55089981 171 7 0.5786616 294 6 0.3000000 26 2 0.5208357 204 7 0.4391941 258 7 0.7588091 380 7 0.7368697 353 7 0.6554862 266 7 0.6721769 287 6 0.8160098 314 7 0.7855551 0.7929065 0.7815360 0.8796315 0.8165629 0.8345849 0.8107741 0.92145474 0.8508101 0.8651144 0.8430464 0.7674671 0.7321662 0.65746711 0.7310785 0.77731488 0.69472259 0.7987977 0.88628180 0.8271948 0.8222228 0.7163414 0.8438221 0.9038464 0.8185283 0.8207872 0.7139862 0.8196508 0.7340899 0.8798866 0.8659872 0.8461330 0.5227972 0.6750866 0.52720234 0.36471485 0.6387028 0.3505118 0.7744612 0.7350253 0.6655902 0.7073575 0.8363531 6 0.7989245 0.8027273 0.00392495 7 0.786404 0.755634 0.03076983 0.5513425 5.9273e-01 insignificant 1.00000 1.000000 insignificant 0.809524 3.8751e-01 insignificant 1 1.000000 insignificant -0.0067795 0.83558600 insignificant 1.00000 insignificant 0.7989245 0.5220070 0.27944232 7 0.786404 0.4501547 0.33624915 2.6943e-24 9.5773e-01 hypermethylated 1.0777e-22 1.0000e+00 hypermethylated 2.7957e-09 9.9122e-01 hypermethylated 1.2155e-07 1.0000e+00 hypermethylated 0.30963734 2.1298e-04 hypermethylated 5.6046e-03 hypermethylated 0.7990643 0.7225000 0.06769518 7 0.828070 0.765750 0.0623201 1.4184e-09 9.3679e-01 weaklyHypermeth 2.3639e-07 1.0000e+00 weaklyHypermeth 9.2920e-05 9.6522e-01 weaklyHypermeth 6.6371e-03 1.00000000 weaklyHypermeth 0.05630003 1.4556e-01 insignificant 1.0000e+00 insignificant 0.8027273 0.5220070 0.2798947 7 0.755634 0.4501547 0.3054793 8.5239e-17 9.8156e-01 hypermethylated 2.8413e-15 1.0000e+00 hypermethylated 1.8126e-08 9.9846e-01 hypermethylated 7.2502e-07 1.0000e+00 hypermethylated 0.3164168 1.0269e-04 hypermethylated 3.2091e-03 hypermethylated 0.803003 0.7223265 0.07620022 7 0.7921531 0.732286 0.05986702 1.1699e-05 7.3227e-01 weaklyHypermeth 5.0864e-04 1.00000000 weaklyHypermeth 2.3486e-04 8.8139e-01 weaklyHypermeth 1.5657e-02 1.0000000 weaklyHypermeth 0.06307950 1.3841e-01 insignificant 1.00000000 insignificant 0.5224670 0.7223265 -0.21411567 7 0.5144625 0.732286 -2.1782e-01 8.5855e-01 4.2393e-07 hypomethylated 1.0000e+00 9.0197e-06 hypomethylated 9.5405e-01 1.6412e-04 hypomethylated 1.0000e+00 4.4341e-03 hypomethylated -0.2533373 8.3275e-04 hypomethylated 3.0153e-02 hypomethylated chr17 26947250 26948250 50278 MIR365-2 ENSG00000199187 0.6440435 132 7 0.5759213 138 6 0.6196825 107 3 0.6959117 88 4 0.3290665 55 3 0.7111370 167 4 0.4743386 45 3 0.6518349 144 6 0.53869130 76 5 0.577877 70 3 0.7033674 176 6 0.2583333 31 3 0.3988341 227 6 0.7460705 85 3 0.6219855 159 6 0.1555556 72 3 0.560000 9 1 0.4577725 231 7 0.5473364 238 6 0.4777337 97 4 0.451282 54 6 0.4218019 92 6 0.6911561 99 4 0.8317460 46 4 0.5026094 85 6 0.7887745 227 6 0.6445060 129 4 0.7000000 48 3 0.6216667 140 6 0.7770592 274 6 0.7469132 310 7 0.726945 136 7 0.0000000 232 6 0.01154401 114 6 0.1000000 147 5 0.0000000 125 9 0.0204425 206 6 0.1166667 284 9 0.5934084 126 4 0.5697237 169 7 0.6277318 101 6 0.3624199 107 6 0.3405281 151 7 0.5930892 0.5834625 0.5349755 0.5003283 0.5789754 0.7236586 0.5857291 0.47110092 0.5840014 0.5438779 0.6937927 0.3158577 0.3773607 0.62398754 0.4823218 0.17332325 0.41257282 0.2952961 0.55902263 0.5871681 0.6279415 0.2746429 0.7353665 0.7412105 0.5179293 0.6285711 0.5369168 0.4386293 0.5298020 0.6462085 0.6373470 0.7507101 0.0000000 0.0253166 0.00042481 0.00000000 0.0126566 0.0000000 0.4262739 0.2978411 0.3419076 0.2552780 0.2118896 3 0.5273038 0.6267563 -0.09219570 6 0.607806 0.712297 -0.10449090 0.9999353 1.2098e-03 weaklyHypometh 1.00000 0.151230 insignificant 0.998747 4.7822e-02 weaklyHypometh 1 1.000000 insignificant -0.1214304 0.02888875 lowCoverage 1.00000 lowCoverage 0.5274819 0.0108303 0.52097991 6 0.613692 0.1253301 0.48836177 8.2156e-30 1.0000e+00 hypermethylated 4.5642e-28 1.0000e+00 hypermethylated 5.2516e-14 1.0000e+00 hypermethylated 5.8351e-12 1.0000e+00 hypermethylated 0.49583246 1.6202e-11 lowCoverage 2.3145e-09 lowCoverage 0.5274819 0.3455657 0.20250010 6 0.613692 0.536465 0.0772267 2.4084e-04 9.7178e-01 hypermethylated 9.2632e-03 1.0000e+00 hypermethylated 2.9700e-03 9.9173e-01 weaklyHypermeth 1.3500e-01 1.00000000 insignificant 0.03851228 6.0113e-01 lowCoverage 1.0000e+00 lowCoverage 0.6267563 0.0090416 0.6205291 6 0.712297 0.0281445 0.6841521 8.9233e-42 1.0000e+00 hypermethylated 1.4872e-39 1.0000e+00 hypermethylated 1.1544e-15 1.0000e+00 hypermethylated 2.8860e-13 1.0000e+00 hypermethylated 0.6172628 3.7202e-10 hypermethylated 4.6502e-08 hypermethylated 0.626756 0.3445636 0.29553536 6 0.7122967 0.484961 0.22733536 2.7551e-10 9.9887e-01 hypermethylated 3.4438e-08 1.00000000 hypermethylated 2.6164e-06 9.9749e-01 hypermethylated 3.7378e-04 1.0000000 hypermethylated 0.15994266 6.0263e-02 insignificant 1.00000000 insignificant 0.0108303 0.3455657 -0.33339447 7 0.1253301 0.536465 -4.1114e-01 1.0000e+00 1.7509e-13 hypomethylated 1.0000e+00 1.4591e-11 hypomethylated 1.0000e+00 1.3154e-09 hypomethylated 1.0000e+00 6.5770e-07 hypomethylated -0.4573202 8.7445e-04 hypomethylated 3.0153e-02 hypomethylated chr17 27611650 27612650 50284 ENSG00000214708 0.8499222 128 5 0.6737845 90 5 0.7634921 86 5 0.8103520 107 5 0.7666667 36 5 0.7131430 156 5 0.5166667 22 1 0.7736364 47 5 0.69841270 39 4 0.518750 36 4 0.8217498 136 5 0.5500000 19 0 0.8939394 54 5 0.6300000 27 2 0.7916667 56 5 1.0000000 1 0 0.500000 4 0 0.8361111 92 5 0.7400000 48 5 0.8628280 99 5 0.773810 20 0 0.9214906 78 5 0.8525641 55 5 0.8571429 28 3 0.8592593 35 4 0.8064327 95 5 0.8393162 68 5 0.6000000 9 0 0.7000000 15 1 0.6046977 83 5 0.8233333 124 5 0.619747 151 5 0.6987179 80 5 0.72666667 55 5 0.6150327 70 4 0.6500000 15 0 0.7282468 40 5 0.7882353 105 5 0.6949735 91 5 0.9192059 92 5 0.8862637 123 5 0.9000000 35 5 0.8000000 113 5 0.8242639 0.6509174 0.7566138 0.7965136 0.7386831 0.7303453 0.4691358 0.76837823 0.7492455 0.6000000 0.8097070 0.4845679 0.8698092 0.60370370 0.7268519 NA 0.56342151 0.8268176 0.71975309 0.8295225 0.8765432 0.9103453 0.8323837 0.8447972 0.8271605 0.7904844 0.8092751 0.5062341 0.6851852 0.7196653 0.8183892 0.8613375 0.6326369 0.7242798 0.77253141 0.69135802 0.7158490 0.7761273 0.8206937 0.9146333 0.8757292 0.8847737 0.7884400 0 0.7809821 0.8265440 -0.05343495 5 0.763524 0.650839 0.11268499 0.9972512 1.0006e-01 insignificant 1.00000 1.000000 insignificant 0.997242 8.2361e-02 insignificant 1 1.000000 insignificant -0.0359268 0.42659716 lowCoverage 1.00000 lowCoverage 0.7807361 0.7342466 0.03214533 5 0.728619 0.6988425 0.02977644 6.2218e-02 9.1116e-01 insignificant 3.7034e-01 1.0000e+00 insignificant 1.1290e-01 4.7875e-01 insignificant 7.5938e-01 1.0000e+00 insignificant 0.03440616 3.9564e-01 lowCoverage 1.0000e+00 lowCoverage 0.7807361 0.8568282 -0.08054826 5 0.728619 0.716275 0.0123440 9.8235e-01 9.5974e-03 weaklyHypometh 1.0000e+00 2.9992e-01 insignificant 9.9437e-01 9.5329e-04 weaklyHypometh 1.0000e+00 0.09893202 weaklyHypometh -0.10453258 7.3882e-02 lowCoverage 1.0000e+00 lowCoverage 0.8284960 0.7342466 0.0895814 5 0.809592 0.6988425 0.1107490 1.5154e-03 9.9959e-01 weaklyHypermeth 1.3903e-02 1.0000e+00 weaklyHypermeth 4.2823e-03 9.8727e-01 weaklyHypermeth 4.4607e-02 1.0000e+00 weaklyHypermeth 0.0703329 1.0575e-01 lowCoverage 8.2363e-01 lowCoverage 0.828496 0.8568282 -0.02654734 5 0.8095915 0.716275 0.09331651 7.3032e-01 1.6676e-01 insignificant 1.0000e+00 1.00000000 insignificant 8.9492e-01 1.8103e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.06860581 2.2506e-01 lowCoverage 1.00000000 lowCoverage 0.7342466 0.8568282 -0.11787391 5 0.6988425 0.716275 -1.7432e-02 9.9303e-01 5.5198e-03 weaklyHypometh 1.0000e+00 5.6905e-02 weaklyHypometh 9.9661e-01 8.6807e-03 weaklyHypometh 1.0000e+00 1.1274e-01 insignificant -0.1389387 2.5478e-02 lowCoverage 3.3340e-01 lowCoverage chr17 28169050 28170050 50292 ENSG00000210329 0.9028015 343 9 0.8429085 118 8 0.8238960 100 9 0.8790831 188 9 0.8291667 53 6 0.8758702 234 9 0.8490093 86 6 0.8401989 68 6 0.64126984 51 4 0.902637 64 7 0.8537417 205 9 0.7884416 56 6 0.7338095 99 7 NA 0 0 0.7572129 88 8 0.8349206 55 5 0.762652 57 5 0.8245384 191 8 0.9038305 91 8 0.7876448 186 8 0.987654 43 5 0.8457956 102 6 0.9258469 146 9 0.9193122 59 6 0.9484127 54 6 0.8781784 125 9 0.9312562 69 6 0.8750000 43 3 0.7787453 93 8 0.9034832 111 8 0.9209829 180 9 0.897389 259 9 0.7202852 97 7 0.55897059 95 6 0.8475831 211 9 0.6458333 63 7 0.8115385 62 5 0.7404575 138 9 0.9226657 276 9 0.9331660 333 9 0.9084795 268 9 0.9081738 246 9 0.9232458 259 9 0.9033040 0.8911862 0.7784290 0.8388191 0.8717545 0.8808377 0.8648261 0.78622956 0.6779762 0.9585588 0.9037769 0.8753608 0.8791241 NA 0.9054155 0.85210905 0.85359398 0.8741339 0.88917400 0.8608558 0.9761905 0.9029994 0.9020853 0.9435941 0.9452860 0.8722809 0.9060178 0.9241071 0.9147654 0.9159604 0.8979371 0.8907737 0.6914099 0.6868902 0.76196252 0.75823848 0.9116300 0.8002145 0.9418189 0.9431437 0.8952950 0.8986044 0.8943550 3 0.8752679 0.9026480 -0.02246438 7 0.862504 0.897340 -0.03483639 0.9645394 2.7149e-02 weaklyHypometh 1.00000 0.977643 insignificant 0.996956 8.5736e-05 weaklyHypometh 1 0.042868 weaklyHypometh -0.0781819 0.00120767 weaklyHypometh 0.60383 insignificant 0.8752679 0.7852853 0.09737694 7 0.862504 0.7594483 0.10305562 1.7547e-08 9.9997e-01 weaklyHypermeth 2.9741e-07 1.0000e+00 weaklyHypermeth 5.9642e-04 9.9912e-01 weaklyHypermeth 9.0367e-03 1.0000e+00 weaklyHypermeth 0.10204477 6.6327e-02 insignificant 6.9326e-01 insignificant 0.8752679 0.9312590 -0.04857403 8 0.862504 0.913622 -0.0511176 9.9737e-01 6.5727e-03 weaklyHypometh 1.0000e+00 2.3474e-01 insignificant 9.9845e-01 3.6581e-03 weaklyHypometh 1.0000e+00 0.22863152 insignificant -0.09632336 5.5693e-06 weaklyHypometh 1.8564e-03 weaklyHypometh 0.9026480 0.7852853 0.1260402 7 0.897340 0.7594483 0.1378920 7.3683e-11 1.0000e+00 weaklyHypermeth 1.6374e-09 1.0000e+00 weaklyHypermeth 1.8666e-06 1.0000e+00 weaklyHypermeth 5.3932e-05 1.0000e+00 weaklyHypermeth 0.1802267 7.1542e-03 weaklyHypermeth 1.1716e-01 insignificant 0.902648 0.9312590 -0.02171457 7 0.8973404 0.913622 -0.01628125 9.1022e-01 9.6982e-02 insignificant 1.0000e+00 1.00000000 insignificant 4.9960e-01 3.7064e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.01814146 2.8070e-01 insignificant 1.00000000 insignificant 0.7852853 0.9312590 -0.14345733 7 0.7594483 0.913622 -1.5417e-01 9.9996e-01 4.1213e-09 weaklyHypometh 1.0000e+00 1.3295e-07 weaklyHypometh 9.9999e-01 3.2175e-05 weaklyHypometh 1.0000e+00 1.1805e-03 weaklyHypometh -0.1983681 5.7994e-03 weaklyHypometh 1.2524e-01 insignificant chr17 28477650 28478650 50305 SPACA3 ENSG00000141316 0.7837948 554 14 0.6944184 272 13 0.7272221 185 14 0.8523193 298 14 0.7895892 221 15 0.7892222 400 12 0.7220946 238 16 0.7503582 183 12 0.68223835 186 13 0.831633 183 14 0.7917948 471 16 0.7940599 184 10 0.8180466 358 14 0.7778701 152 7 0.8077282 193 14 0.7466165 103 13 0.745118 1316 14 0.8107197 340 14 0.7549529 282 14 0.8376939 385 12 0.827899 81 5 0.7934484 120 11 0.7865037 364 14 0.7614941 107 7 0.6957404 156 8 0.8488529 359 14 0.7859816 126 7 0.8222222 85 5 0.7279062 203 10 0.7914490 353 14 0.8110804 310 14 0.822678 571 12 0.6596928 248 14 0.75471889 217 14 0.7463121 276 11 0.7339216 175 10 0.7109591 176 10 0.8123684 307 14 0.8135686 502 14 0.7897148 480 14 0.7735197 410 14 0.8788046 412 14 0.7622392 396 14 0.8150476 0.7932157 0.7211939 0.8525422 0.8032771 0.8246002 0.8082751 0.82731143 0.7553807 0.8519473 0.8132801 0.7550532 0.8515157 0.81278805 0.8555602 0.86395617 0.81286791 0.8478844 0.83760343 0.8605780 0.8372807 0.8194710 0.8502899 0.7931522 0.7814817 0.8641685 0.7788892 0.8710526 0.8013141 0.8229048 0.8411939 0.8654620 0.6414442 0.7696006 0.76431864 0.76226643 0.8046930 0.8133366 0.8657944 0.8746385 0.8399782 0.8744909 0.8236229 4 0.8136531 0.8070547 -0.01735290 14 0.793769 0.805801 -0.01203247 0.9798450 3.7778e-02 weaklyHypometh 1.00000 1.000000 insignificant 0.995131 7.5718e-02 insignificant 1 1.000000 insignificant -0.0142301 0.39334453 insignificant 1.00000 insignificant 0.8133949 0.7376698 0.06243427 14 0.775021 0.7525264 0.02249432 9.8588e-07 7.9916e-01 weaklyHypermeth 1.3283e-05 1.0000e+00 weaklyHypermeth 1.6419e-02 7.9043e-01 weaklyHypermeth 1.5941e-01 1.0000e+00 insignificant 0.03904574 1.3061e-01 insignificant 1.0000e+00 insignificant 0.8134524 0.8218182 -0.03519091 14 0.775021 0.817423 -0.0424023 9.9299e-01 4.4849e-03 weaklyHypometh 1.0000e+00 1.7940e-01 insignificant 9.9867e-01 3.6876e-02 weaklyHypometh 1.0000e+00 0.81947540 insignificant -0.02819483 2.6794e-01 insignificant 1.0000e+00 insignificant 0.8066572 0.7376698 0.0732406 14 0.797238 0.7525264 0.0447116 2.4607e-07 9.3113e-01 weaklyHypermeth 4.1707e-06 1.0000e+00 weaklyHypermeth 1.5891e-03 9.8320e-01 weaklyHypermeth 2.0638e-02 1.0000e+00 weaklyHypermeth 0.0532758 5.5323e-02 insignificant 5.3711e-01 insignificant 0.807284 0.8218182 -0.02312243 14 0.8199653 0.817423 0.00254224 8.8603e-01 3.5893e-01 insignificant 1.0000e+00 1.00000000 insignificant 9.1674e-01 6.5311e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.01396473 5.8217e-01 insignificant 1.00000000 insignificant 0.7374821 0.8217372 -0.09710223 14 0.7407420 0.808729 -6.7987e-02 9.9715e-01 3.3093e-06 weaklyHypometh 1.0000e+00 6.3640e-05 weaklyHypometh 9.9806e-01 1.1599e-04 weaklyHypometh 1.0000e+00 3.3140e-03 weaklyHypometh -0.0672406 4.7187e-02 weaklyHypometh 4.9765e-01 insignificant chr17 29281950 29282950 50321 ENSG00000221699 0.9280763 448 12 0.8350648 470 12 0.8798091 285 12 0.8309871 497 12 0.8402468 247 12 0.7720066 609 12 0.8200730 313 12 0.7539777 329 12 0.83341988 226 12 0.793760 258 12 0.8574813 594 12 0.8927154 168 12 0.8891588 340 12 0.8981380 175 12 0.9397474 363 12 0.7860506 159 12 0.250000 4 0 0.8506484 472 12 0.9303014 837 12 0.8638435 406 12 0.786841 149 12 0.8584289 239 12 0.7895871 236 12 0.6449527 149 12 0.7533395 103 10 0.9555894 443 12 0.9229727 319 12 0.8977183 134 12 0.8945878 413 12 0.7216213 519 12 0.8736898 722 12 0.809964 467 12 0.6704845 285 12 0.64692949 269 12 0.6346154 223 8 0.8333333 37 5 0.6238471 275 12 0.7008552 490 12 0.8443247 498 12 0.8444018 469 12 0.8017258 419 12 0.7503607 398 11 0.9187373 270 12 0.9086208 0.8245441 0.8732954 0.8338469 0.8726253 0.8623951 0.9363477 0.85941107 0.8261546 0.9609032 0.9202863 0.8907206 0.9482125 0.91122087 0.9422627 0.75354982 0.67459789 0.9058298 0.92982074 0.8864054 0.8334076 0.9200958 0.8662672 0.7120126 0.8791740 0.9511309 0.9241117 0.9499000 0.8709746 0.8676584 0.9474165 0.9233364 0.6988695 0.6712963 0.67197722 0.74834859 0.6997271 0.8018896 0.9009669 0.9220241 0.9271817 0.7962974 0.9180440 12 0.8884722 0.9026458 -0.01578495 12 0.773273 0.758809 0.01446447 0.8455877 2.4096e-01 insignificant 1.00000 1.000000 insignificant 0.702883 5.8906e-01 insignificant 1 1.000000 insignificant -0.0034990 0.93363303 insignificant 1.00000 insignificant 0.8888426 0.6877771 0.19092926 12 0.821603 0.6209371 0.20066579 3.6941e-19 1.0000e+00 weaklyHypermeth 1.1544e-17 1.0000e+00 weaklyHypermeth 3.8776e-06 9.9999e-01 weaklyHypermeth 8.0784e-05 1.0000e+00 weaklyHypermeth 0.13726448 7.8607e-03 weaklyHypermeth 1.3323e-01 insignificant 0.8888426 0.8972736 -0.00370670 12 0.821603 0.725947 0.0956561 4.5772e-01 7.1641e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.8329e-01 9.3667e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.00963474 8.2389e-01 insignificant 1.0000e+00 insignificant 0.9033419 0.6877771 0.2179803 12 0.806234 0.6209371 0.1852973 3.3101e-15 1.0000e+00 hypermethylated 1.0031e-13 1.0000e+00 hypermethylated 3.0639e-05 9.9999e-01 hypermethylated 6.8087e-04 1.0000e+00 hypermethylated 0.1407635 5.2894e-03 weaklyHypermeth 9.1197e-02 weaklyHypermeth 0.903342 0.8972736 0.00853051 12 0.8062344 0.725947 0.08028765 3.1556e-01 9.3055e-01 insignificant 1.0000e+00 1.00000000 insignificant 3.2640e-01 9.2477e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.00613571 8.7544e-01 insignificant 1.00000000 insignificant 0.6877771 0.8972736 -0.16156713 12 0.6209371 0.725947 -1.0501e-01 1.0000e+00 7.5521e-08 weaklyHypometh 1.0000e+00 1.9364e-06 weaklyHypometh 9.9971e-01 8.0320e-03 weaklyHypometh 1.0000e+00 1.0570e-01 insignificant -0.1468992 6.8909e-03 weaklyHypometh 1.4063e-01 insignificant chr17 30338950 30339950 50337 LIG3 ENSG00000005156 0.7866162 128 6 0.6639557 122 5 0.6776316 97 5 0.7888824 150 6 0.8722222 49 2 0.7287349 236 7 0.8224206 60 6 0.6183807 61 4 0.69444444 79 5 0.684524 55 5 0.8036726 121 5 0.8333333 46 2 0.8363614 76 5 0.8115942 37 2 0.7927238 108 5 0.7500000 25 1 0.542296 86 3 0.6116981 121 8 0.8952020 86 5 0.7794426 152 5 0.819444 23 1 0.7886905 67 5 0.7842879 95 6 0.7880952 48 3 0.8678571 45 5 0.7821295 127 6 0.8282143 62 5 0.9444444 28 2 0.7984127 53 4 0.5126260 128 5 0.7789206 134 5 0.753564 163 6 0.8063625 86 5 0.73676324 64 5 0.6928094 107 5 0.8333333 10 0 0.7285714 81 5 0.6062025 113 5 0.7311728 109 6 0.7880586 145 6 0.7101685 121 6 0.6858489 75 3 0.7809659 100 6 0.8463970 0.6815673 0.7074182 0.8278247 0.8842520 0.7657945 0.8610330 0.75637238 0.7183727 0.8966535 0.8154789 0.8679790 0.8696519 0.83361862 0.7926058 0.78083990 0.75021872 0.8167768 0.86891553 0.8361778 0.8720472 0.7647638 0.8219517 0.7870079 0.8769685 0.8402171 0.8086558 0.8492303 0.8346457 0.8153152 0.8436908 0.8198377 0.8270257 0.8122311 0.85522608 0.88593057 0.7797150 0.8086879 0.8120443 0.8567336 0.8720843 0.7511357 0.8490157 2 0.7871104 0.7954779 -0.01683021 5 0.699798 0.617030 0.08276832 0.9798168 6.7355e-01 insignificant 1.00000 1.000000 insignificant 0.632171 5.4871e-01 insignificant 1 1.000000 insignificant -0.0375170 0.30580254 lowCoverage 1.00000 lowCoverage 0.7862797 0.7821351 -0.02192445 5 0.599827 0.7646914 -0.16486439 9.8982e-01 5.6768e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6372e-01 6.5413e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01569977 6.9875e-01 lowCoverage 1.0000e+00 lowCoverage 0.7831978 0.7872727 -0.02764304 5 0.680511 0.799070 -0.1185591 9.1404e-01 5.9973e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.1151e-01 2.6802e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.01046389 7.2278e-01 lowCoverage 1.0000e+00 lowCoverage 0.7954779 0.7811816 -0.0016182 5 0.617030 0.7254733 -0.1084434 9.6502e-01 8.7739e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8884e-01 9.5798e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0532168 2.5026e-01 lowCoverage 1.0000e+00 lowCoverage 0.792194 0.7872727 -0.01320887 5 0.6755449 0.799070 -0.12352555 8.3671e-01 1.9345e-01 insignificant 1.0000e+00 1.00000000 insignificant 8.4319e-01 3.5579e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.04798093 1.9222e-01 lowCoverage 1.00000000 lowCoverage 0.7809735 0.7872727 -0.01207921 5 0.7132100 0.799070 -8.5860e-02 2.4400e-01 2.0116e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.2169e-01 3.6760e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0052359 8.9582e-01 lowCoverage 1.0000e+00 lowCoverage chr17 33258350 33259350 50372 HNF1B ENSG00000108753 0.7334893 320 6 0.6837951 285 6 0.6808702 272 6 0.8160030 260 6 0.7239067 155 6 0.8496752 833 6 0.7535754 254 6 0.6886511 266 6 0.74376923 311 6 0.757197 236 6 0.7858509 297 6 0.7903803 151 6 0.6027309 287 6 0.7246375 204 6 0.6925933 429 6 0.5863787 185 6 0.791071 72 4 0.6815430 282 6 0.6828712 451 6 0.8326541 324 6 0.633320 73 6 0.5839131 116 6 0.8528080 149 6 0.7010836 188 6 0.6102740 77 6 0.7046959 347 6 0.5739351 229 6 0.6235349 102 6 0.7278488 358 6 0.5418394 467 6 0.6566448 524 6 0.802166 399 6 0.5587262 161 6 0.60000000 129 6 0.7916942 381 6 0.8666667 23 2 0.6480563 290 6 0.5480273 340 6 0.8120418 405 6 0.8384314 269 6 0.8001291 320 6 0.6080778 175 6 0.8325622 286 6 0.7662563 0.7378549 0.7142043 0.8504395 0.7554937 0.8590792 0.7822849 0.73929636 0.7945886 0.8031499 0.8240958 0.7986373 0.6593409 0.77916048 0.7224419 0.74464824 0.70404455 0.7342429 0.72263960 0.8376103 0.7700894 0.7244679 0.8683714 0.7559555 0.7391869 0.7455494 0.6230830 0.7974763 0.7585926 0.6700423 0.7577892 0.8175941 0.6131942 0.6903766 0.78047489 0.78005021 0.7278161 0.7308610 0.8419800 0.8506196 0.8334537 0.7521363 0.8612781 6 0.7938372 0.7148992 0.03457709 6 0.709716 0.607585 0.10213071 0.0361480 9.9405e-01 weaklyHypermeth 1.00000 1.000000 insignificant 0.245401 9.6049e-01 insignificant 1 1.000000 insignificant 0.0624102 0.06096490 insignificant 1.00000 insignificant 0.7938372 0.6722054 0.06922153 6 0.709716 0.6251654 0.08455046 2.0156e-03 5.8053e-01 weaklyHypermeth 1.5871e-02 1.0000e+00 weaklyHypermeth 2.1280e-01 6.6676e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.06122044 3.1565e-01 insignificant 1.0000e+00 insignificant 0.7938372 0.8680412 -0.05038115 6 0.709716 0.692694 0.0170215 9.9696e-01 1.3319e-02 weaklyHypometh 1.0000e+00 3.4833e-01 insignificant 9.9839e-01 2.1818e-02 weaklyHypometh 1.0000e+00 0.58966305 insignificant -0.04816625 3.4071e-01 insignificant 1.0000e+00 insignificant 0.7148992 0.6722054 0.0335497 6 0.607585 0.6251654 -0.0175802 8.5017e-02 6.6157e-02 insignificant 4.8861e-01 1.0000e+00 insignificant 4.2531e-01 3.3135e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0011898 9.8469e-01 insignificant 1.0000e+00 insignificant 0.714899 0.8680412 -0.08637520 6 0.6075852 0.692694 -0.08510917 1.0000e+00 7.3010e-04 weaklyHypometh 1.0000e+00 0.07301042 weaklyHypometh 9.9996e-01 1.6122e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant -0.11057649 6.4460e-02 insignificant 1.00000000 insignificant 0.6722054 0.8680412 -0.11768251 6 0.6251654 0.692694 -6.7529e-02 9.2916e-01 1.6701e-02 weaklyHypometh 1.0000e+00 1.3151e-01 insignificant 8.6739e-01 2.1298e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.1093867 1.4648e-01 insignificant 1.0000e+00 insignificant chr17 33968050 33969050 50385 ENSG00000167433 0.0625000 44 2 0.0376068 72 5 0.0124444 181 5 0.0317460 35 3 0.0000000 203 5 0.0781250 38 3 0.0000000 210 5 0.1011111 81 5 0.00000000 97 5 0.012500 114 5 0.0425474 163 5 0.0000000 144 5 0.0166667 100 5 NA 0 0 0.0313593 232 5 0.0072194 379 5 0.020690 183 5 0.0000000 18 0 0.0047619 231 5 0.1875000 48 5 0.000000 38 5 0.1200000 14 1 0.0370370 42 4 0.0467532 51 4 0.0000000 4 0 0.0222222 90 6 0.0892857 34 4 0.0600000 32 4 0.0000000 61 5 0.0312500 125 5 0.0138889 162 6 0.000000 28 2 0.0111111 81 5 0.00000000 83 4 0.1000000 22 4 0.0000000 4 0 0.0307692 37 4 0.1518519 78 8 0.2500000 36 3 0.0285714 48 7 0.0000000 29 2 0.2000000 10 2 0.0368421 53 3 0.0000000 0.0048077 0.0069444 0.0000000 0.0000000 0.0390625 0.0000000 0.03298611 0.0000000 0.0000000 0.0480980 0.0000000 0.0000000 NA 0.0175225 0.00760380 0.00000000 0.0000000 0.00148810 0.0000000 0.0000000 0.0000000 0.0694444 0.0284091 0.0012500 0.0000000 0.0012500 0.0125000 0.0000000 0.0000000 0.0000000 0.0000000 0.0173611 0.0000000 0.00000000 0.00000000 0.0000000 0.0000000 NA 0.0000000 0.0000000 NA 0.0000000 0 0.0151574 0.0279412 -0.00767331 5 0.043794 0.029164 0.01462957 0.4677443 8.1828e-01 insignificant 1.00000 1.000000 insignificant 0.208415 9.9891e-01 insignificant 1 1.000000 insignificant -0.0009955 0.94931877 lowCoverage 1.00000 lowCoverage 0.0151574 0.0197368 -0.00128815 5 0.043794 0.0419898 0.00180390 3.6337e-01 8.2056e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.1630e-01 9.7511e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01491443 6.0891e-01 lowCoverage 1.0000e+00 lowCoverage 0.0151574 0.0511364 -0.01305955 0 0.043794 0.144438 -0.1006446 3.2405e-01 4.3183e-04 noCoverage 1.0000e+00 2.9573e-02 noCoverage 4.8732e-01 3.7006e-01 noCoverage 1.0000e+00 1.00000000 noCoverage -0.06904177 2.4863e-01 lowCoverage 1.0000e+00 lowCoverage 0.0279412 0.0197368 0.0027044 5 0.029164 0.0419898 -0.0128257 8.7409e-01 6.5388e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.2316e-01 8.0007e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0139189 6.3422e-01 lowCoverage 1.0000e+00 lowCoverage 0.027941 0.0511364 -0.01972600 0 0.0291641 0.144438 -0.11527413 9.2011e-01 1.0873e-02 noCoverage 1.0000e+00 0.41819665 noCoverage 9.6559e-01 2.1821e-01 noCoverage 1.0000e+00 1.0000000 noCoverage -0.06804628 2.5479e-01 lowCoverage 1.00000000 lowCoverage 0.0197368 0.0511364 -0.01530567 0 0.0419898 0.144438 -1.0245e-01 8.1355e-01 2.8410e-01 noCoverage 1.0000e+00 1.0000e+00 noCoverage 9.7146e-01 8.6682e-01 noCoverage 1.0000e+00 1.0000e+00 noCoverage -0.0541273 3.7810e-01 lowCoverage 1.0000e+00 lowCoverage chr17 34548650 34549650 50397 PLXDC1 ENSG00000161381 0.8057836 138 5 0.9009972 188 6 0.9603049 191 6 0.9547619 134 5 0.9533298 82 5 0.9053359 312 6 0.8552288 74 5 0.9129374 97 5 0.88239316 118 5 0.936199 100 5 0.8728414 158 5 0.7341503 64 4 0.7366340 130 5 0.9339286 66 5 0.7756186 106 5 0.7511111 40 4 0.893846 46 4 0.9113107 160 5 0.9639064 82 5 0.9470600 243 6 0.814316 62 5 0.9080492 127 5 0.9010911 146 6 0.6414141 59 5 0.9390332 96 5 0.8674091 186 6 0.9404509 116 5 0.6582087 63 5 0.9682401 78 5 0.9366860 238 6 0.8117228 320 6 0.944621 222 6 0.8253619 198 6 0.91166667 62 5 0.8307389 93 3 0.9600000 48 4 0.8729825 86 5 0.7336628 239 6 0.9470824 120 5 0.9391167 122 5 0.7162210 88 5 0.9472222 80 4 0.8479621 152 5 0.9242790 0.8991883 0.9578851 0.9385377 0.9488233 0.9305133 0.9265169 0.89863285 0.8819604 0.9300514 0.9254769 0.7971862 0.8967171 0.95015467 0.9165074 0.70428696 0.86723734 0.9048629 0.95234718 0.9413254 0.8270745 0.9076321 0.8864496 0.8545216 0.9353802 0.8426561 0.9358163 0.7908885 0.9558761 0.9219994 0.9118105 0.9436411 0.7946059 0.9017388 0.90710640 0.96062992 0.8561473 0.8620991 0.9591310 0.9149984 0.8548992 0.9390857 0.9552443 4 0.9086595 0.9030940 0.00667668 6 0.811444 0.704570 0.10687327 0.7906763 9.1522e-01 insignificant 1.00000 1.000000 insignificant 0.265261 9.2745e-01 insignificant 1 1.000000 insignificant 0.0184471 0.61770662 insignificant 1.00000 insignificant 0.9093787 0.8250689 0.06736203 6 0.912874 0.8314069 0.08146714 1.6109e-03 9.7717e-01 weaklyHypermeth 1.3204e-02 1.0000e+00 weaklyHypermeth 4.3981e-01 9.2485e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02364848 5.3367e-01 lowCoverage 1.0000e+00 lowCoverage 0.9091630 0.9181495 -0.01256512 5 0.900427 0.817870 0.0825572 2.1331e-01 3.1886e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.1896e-01 1.7294e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.00013697 9.9783e-01 lowCoverage 1.0000e+00 lowCoverage 0.9041496 0.8250689 0.0727163 6 0.792642 0.8314069 -0.0387653 2.7710e-02 8.0941e-01 weaklyHypermeth 1.7763e-01 1.0000e+00 insignificant 6.2247e-01 4.7124e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0052014 9.1006e-01 lowCoverage 1.0000e+00 lowCoverage 0.904678 0.9181495 -0.01973064 5 0.9058761 0.817870 0.08800587 3.4485e-01 5.0928e-02 insignificant 1.0000e+00 1.00000000 insignificant 8.8778e-01 3.9540e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant -0.01858404 7.4431e-01 lowCoverage 1.00000000 lowCoverage 0.8248276 0.9181495 -0.08960610 5 0.8073222 0.817870 -1.0548e-02 8.9053e-01 6.8815e-02 insignificant 1.0000e+00 4.3554e-01 insignificant 9.5165e-01 7.1712e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0237854 6.7840e-01 lowCoverage 1.0000e+00 lowCoverage chr17 34584950 34585950 50398 ARL5C ENSG00000141748 0.7200669 586 16 0.7632635 487 14 0.6933001 401 17 0.7018616 477 15 0.8356098 266 14 0.7452913 1294 20 0.7610281 289 14 0.8360007 359 17 0.77607505 333 14 0.839896 272 16 0.7771291 663 17 0.7933023 108 10 0.8193104 486 15 0.7847952 195 6 0.8481703 349 14 0.6514967 101 7 0.769450 652 9 0.6134242 608 12 0.6075427 855 20 0.7012447 908 19 0.832593 197 13 0.6118019 103 7 0.6761930 357 16 0.8699103 197 15 0.7383005 122 10 0.7760843 684 16 0.6885480 308 15 0.7420530 127 13 0.7298279 519 12 0.7505333 702 17 0.6780270 903 20 0.684087 819 19 0.7610913 400 16 0.77467981 390 13 0.7326087 149 8 0.7567065 96 6 0.7469954 314 15 0.7778257 641 19 0.6840386 490 14 0.8400836 579 16 0.6536120 458 15 0.7455839 572 14 0.6919286 391 16 0.8542383 0.8122792 0.7610748 0.8497022 0.8180155 0.8625849 0.7681679 0.86840540 0.8320507 0.8794655 0.8014117 0.7835830 0.8295877 0.82636693 0.8352176 0.60018036 0.76289190 0.8210933 0.79187711 0.8650599 0.8035687 0.6118093 0.7922067 0.8948754 0.8732391 0.8601604 0.7983368 0.8454969 0.7927492 0.8800972 0.7962220 0.8263272 0.7794324 0.8164977 0.70749991 0.74901589 0.8627693 0.8682049 0.7900532 0.8622280 0.8060019 0.7726698 0.8028185 8 0.8137518 0.8237396 -0.00391292 14 0.707027 0.640402 0.06662585 0.4268938 5.5867e-01 insignificant 1.00000 1.000000 insignificant 0.816187 4.3371e-01 insignificant 1 1.000000 insignificant 0.0204163 0.44431876 insignificant 1.00000 insignificant 0.8137518 0.8005025 0.00275900 14 0.707027 0.7088121 -0.00178464 4.2741e-03 2.2693e-08 weaklyHypermeth 3.1427e-02 2.2693e-06 weaklyHypermeth 6.9767e-01 5.5093e-06 inconclusive 1.0000e+00 9.1822e-04 inconclusive -0.00640496 7.1968e-01 insignificant 1.0000e+00 insignificant 0.8140184 0.7931727 -0.00309583 14 0.712212 0.704990 0.0072214 6.6125e-02 4.5738e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.5946e-01 6.0173e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.02886361 4.5964e-01 insignificant 1.0000e+00 insignificant 0.8237396 0.8005025 0.0100204 16 0.640402 0.7088121 -0.0684105 2.5723e-01 6.9622e-05 inconclusive 1.0000e+00 6.9622e-03 inconclusive 9.5503e-01 6.3486e-03 inconclusive 1.0000e+00 6.3486e-01 insignificant -0.0268213 2.3947e-01 insignificant 1.0000e+00 insignificant 0.825179 0.7931727 0.00303231 16 0.6921264 0.704990 -0.01286395 1.2840e-01 6.3816e-01 insignificant 1.0000e+00 1.00000000 insignificant 3.2890e-01 9.3001e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.00844732 8.3336e-01 insignificant 1.00000000 insignificant 0.8007046 0.7931727 0.02336280 16 0.7050678 0.704990 7.7365e-05 8.8618e-04 9.8111e-01 weaklyHypermeth 8.8618e-02 1.0000e+00 weaklyHypermeth 2.1045e-03 9.9727e-01 weaklyHypermeth 2.3383e-01 1.0000e+00 insignificant 0.0352686 3.4760e-01 insignificant 1.0000e+00 insignificant chr17 34618850 34619850 50400 RPL19P12 ENSG00000108298 0.1766336 318 17 0.0603201 621 17 0.1858609 583 17 0.0449308 267 9 0.0742553 503 17 0.2187399 612 17 0.1434615 721 17 0.0673714 473 17 0.13349238 635 17 0.088113 632 17 0.1334641 647 17 0.1651899 712 17 0.2039101 725 17 0.1042328 121 10 0.0943226 636 17 0.0707683 582 15 0.205411 715 9 0.2325368 435 12 0.1675828 621 17 0.1072797 479 17 0.058521 269 17 0.1253448 239 10 0.1019355 489 17 0.0978236 274 17 0.1258325 656 10 0.0556705 735 17 0.1603997 284 17 0.0244638 249 16 0.1353400 389 17 0.1150182 847 17 0.1627732 1016 17 0.110883 362 17 0.0081240 524 17 0.01626813 491 17 0.1666667 210 9 0.0454545 217 8 0.0298830 266 16 0.0029084 666 15 0.1232238 308 17 0.1003518 394 15 0.1917421 175 8 0.1400739 317 12 0.0870772 197 8 0.0986496 0.0474977 0.1895989 0.0542757 0.1056991 0.1028541 0.0910329 0.05513068 0.1077915 0.1162457 0.1032738 0.0867685 0.1333823 0.07115076 0.0896560 0.06930031 0.14094722 0.0515344 0.16815201 0.0789605 0.0626006 0.0661593 0.0640697 0.0790032 0.0519321 0.0471237 0.0976939 0.0145197 0.0988722 0.0778213 0.0916112 0.1196159 0.0199422 0.0117890 0.06019763 0.02020537 0.0196951 0.0025458 0.0844541 0.0762074 0.1409780 0.1128695 0.0964575 8 0.0843526 0.0652998 0.02539543 17 0.158735 0.129426 0.02930873 0.0029300 1.0000e+00 weaklyHypermeth 0.91314 1.000000 insignificant 0.012432 1.0000e+00 weaklyHypermeth 1 1.000000 insignificant 0.0277267 0.12988809 insignificant 1.00000 insignificant 0.0843002 0.0194011 0.06155514 17 0.163732 0.0394918 0.12424064 5.5815e-14 1.0000e+00 weaklyHypermeth 1.3613e-12 1.0000e+00 weaklyHypermeth 3.4940e-12 1.0000e+00 weaklyHypermeth 2.3293e-10 1.0000e+00 weaklyHypermeth 0.08900974 1.4008e-02 weaklyHypermeth 1.9730e-01 insignificant 0.0834247 0.0812365 -0.00285704 14 0.136853 0.117408 0.0194448 1.4554e-01 7.9134e-03 weaklyHypometh 1.0000e+00 2.5527e-01 insignificant 5.0287e-02 6.5706e-01 insignificant 9.8603e-01 1.00000000 insignificant 0.00540009 8.1527e-01 insignificant 1.0000e+00 insignificant 0.0651612 0.0193766 0.0375291 17 0.125436 0.0380814 0.0873545 3.3963e-04 1.0000e+00 weaklyHypermeth 3.4169e-03 1.0000e+00 weaklyHypermeth 4.3558e-05 1.0000e+00 weaklyHypermeth 9.0745e-04 1.0000e+00 weaklyHypermeth 0.0612831 6.2167e-02 insignificant 5.7982e-01 insignificant 0.064856 0.0812365 -0.02580709 14 0.1117892 0.117408 -0.00561897 9.3752e-01 2.5527e-05 weaklyHypometh 1.0000e+00 0.00364674 weaklyHypometh 8.3377e-01 4.7398e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant -0.02232658 3.3922e-01 insignificant 1.00000000 insignificant 0.0191083 0.0812365 -0.07219661 14 0.0314600 0.117408 -8.5948e-02 1.0000e+00 2.8579e-09 weaklyHypometh 1.0000e+00 9.7433e-08 weaklyHypometh 1.0000e+00 2.9882e-05 weaklyHypometh 1.0000e+00 1.1805e-03 weaklyHypometh -0.0836097 2.5672e-02 weaklyHypometh 3.3340e-01 insignificant chr17 35362550 35363550 50409 ENSG00000204913 0.0000000 251 6 0.1132479 277 6 0.0000000 351 6 0.0063837 250 6 0.0012210 316 6 0.0046016 712 6 0.0120150 335 6 0.0020704 362 6 0.00642785 524 6 0.000000 553 6 0.0319444 269 6 0.0000000 380 6 0.0108696 463 6 0.0037879 341 6 0.0046929 504 6 0.0000000 275 6 0.000000 118 4 0.0091991 397 6 0.0206770 560 6 0.0043050 621 6 0.010989 195 6 0.0034014 267 6 0.0549383 277 6 0.0000000 268 6 0.1250000 157 6 0.0818473 404 6 0.0224567 433 6 0.0037037 208 7 0.0000000 413 6 0.0052910 549 6 0.0046898 615 6 0.013335 393 6 0.0196609 258 6 0.00497512 254 6 0.0000000 329 4 0.0257649 79 6 0.0616670 177 6 0.0083983 351 6 0.0000000 310 6 0.0045662 243 4 0.1445183 276 6 0.0173559 289 6 0.0370047 296 6 0.0000000 0.0038369 0.0000000 0.0082027 0.0023785 0.0027962 0.0094229 0.00313688 0.0021256 0.0000000 0.0088976 0.0000000 0.0038904 0.00491920 0.0069222 0.00000000 0.00172613 0.0041654 0.00938285 0.0026201 0.0063914 0.0047504 0.0181513 0.0000000 0.0000000 0.0090625 0.0110636 0.0080165 0.0000000 0.0016570 0.0035329 0.0083043 0.0087954 0.0062084 0.00125892 0.03310376 0.0211858 0.0046939 0.0000000 0.0068907 0.0027699 0.0101060 0.0208585 6 0.0039445 0.0057623 -0.00132005 6 0.015069 0.024338 -0.00926900 0.9852994 5.2572e-01 insignificant 1.00000 1.000000 insignificant 0.997119 5.7952e-01 insignificant 1 1.000000 insignificant -0.0155655 0.24076280 insignificant 1.00000 insignificant 0.0039485 0.0096819 -0.00487212 6 0.018083 0.0647844 -0.04670105 9.7537e-01 2.2936e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7594e-01 1.3736e-02 weaklyHypometh 1.0000e+00 8.4632e-01 insignificant -0.00850553 4.5002e-01 insignificant 1.0000e+00 insignificant 0.0039546 0.0084866 -0.00524948 6 0.025833 0.154757 -0.1289240 8.9840e-01 2.8449e-03 weaklyHypometh 1.0000e+00 1.4225e-01 insignificant 8.4338e-01 3.2572e-02 weaklyHypometh 1.0000e+00 0.75748940 insignificant -0.02911684 3.4204e-01 insignificant 1.0000e+00 insignificant 0.0057623 0.0096685 -0.0036582 6 0.026551 0.0588949 -0.0323439 9.0532e-01 7.0131e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.2034e-01 3.7848e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0070600 6.3766e-01 insignificant 1.0000e+00 insignificant 0.005314 0.0084866 -0.00432101 6 0.0079929 0.154757 -0.14676449 9.7044e-01 3.2906e-01 insignificant 1.0000e+00 1.00000000 insignificant 8.5471e-01 4.1095e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.01355132 6.5915e-01 insignificant 1.00000000 insignificant 0.0090529 0.0084866 -0.00083602 6 0.0568348 0.154757 -9.7923e-02 8.4424e-01 4.2353e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.5437e-01 5.8568e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0206113 4.9903e-01 insignificant 1.0000e+00 insignificant chr17 35432150 35433150 50412 CSF3 ENSG00000108342 0.9155554 375 10 0.8775079 346 7 0.9064939 227 9 0.9633945 405 10 0.8021746 213 9 0.8685604 671 10 0.7089714 256 8 0.9163818 237 9 0.78200933 204 8 0.802829 221 9 0.8730017 367 10 0.9053303 97 8 0.9710696 272 9 0.8329802 125 5 0.9351350 277 8 0.7386659 75 5 0.684211 35 2 0.9433411 464 8 0.8516002 662 9 0.9663926 542 9 0.886813 129 7 0.9331783 118 7 0.8034499 241 9 0.6751042 135 5 0.9411337 359 10 0.8514384 404 8 0.7553404 231 8 0.6870130 120 8 0.9711459 368 9 0.7511969 426 9 0.9826716 602 9 0.934066 375 10 0.8053918 306 10 0.88657789 299 10 0.7740426 315 6 0.8401361 114 8 0.7383703 232 9 0.9606642 432 10 0.9824731 298 9 0.9410433 313 9 0.9651126 259 9 0.9550457 399 8 0.9334421 280 10 0.9114451 0.8901397 0.9236407 0.9456441 0.8485027 0.9326691 0.8741258 0.90898593 0.9304869 0.9570127 0.9064130 0.8929627 0.9630553 0.89710274 0.9280983 0.78856790 NA 0.9304546 0.94710940 0.9508066 0.9857143 0.8876053 0.9526939 0.9759078 0.9442733 0.9328152 0.9075179 0.9042512 0.9385603 0.9612591 0.9648915 0.9124755 0.8496506 0.9249448 0.85510771 0.99002394 0.8825298 0.9564890 0.9640426 0.9199899 0.9583048 0.9383108 0.9443915 4 0.9196767 0.9408909 -0.02379713 9 0.803259 0.723364 0.07989456 0.9745773 2.1850e-02 weaklyHypometh 1.00000 0.977643 insignificant 0.988557 4.9617e-02 weaklyHypometh 1 1.000000 insignificant 0.0145676 0.69955723 insignificant 1.00000 insignificant 0.9196635 0.9108092 0.01271739 9 0.790143 0.7427502 0.04739244 8.0792e-02 6.7267e-02 insignificant 4.6167e-01 1.0000e+00 insignificant 8.1970e-01 4.5875e-02 inconclusive 1.0000e+00 1.0000e+00 insignificant 0.02808309 4.7990e-01 insignificant 1.0000e+00 insignificant 0.9203832 0.9457715 -0.02429467 9 0.815549 0.959292 -0.1437425 9.9072e-01 6.3059e-03 weaklyHypometh 1.0000e+00 2.3355e-01 insignificant 9.8421e-01 8.4827e-03 weaklyHypometh 1.0000e+00 0.40393714 insignificant -0.09314312 1.9663e-04 weaklyHypometh 2.8090e-02 weaklyHypometh 0.9406731 0.9086623 0.0344922 9 0.754101 0.6189585 0.1351430 2.1950e-01 9.1398e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.2810e-01 8.0624e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0135155 7.7227e-01 insignificant 1.0000e+00 insignificant 0.944540 0.9452769 -0.00667585 9 0.9089842 0.951890 -0.04290590 5.8699e-01 2.8453e-02 weaklyHypometh 1.0000e+00 0.91785319 insignificant 4.1936e-01 1.4636e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.10771074 6.4681e-03 weaklyHypometh 0.46200891 insignificant 0.9122703 0.9452769 -0.04268216 9 0.8613260 0.951890 -9.0564e-02 9.0411e-01 1.4595e-02 weaklyHypometh 1.0000e+00 1.2329e-01 insignificant 9.0815e-01 3.3234e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.1212262 1.2951e-02 weaklyHypometh 2.1585e-01 insignificant chr17 35523250 35524250 50422 NR1D1 ENSG00000126368 0.5873749 190 7 0.6032531 120 7 0.4576720 66 2 0.6632267 223 7 0.5183150 36 2 0.7011178 719 7 0.6113445 51 2 0.6307359 128 7 0.63711811 84 5 0.728647 76 5 0.7308256 157 7 0.3309524 36 2 0.5418275 113 5 NA 0 0 0.6292517 43 2 0.8600000 14 2 0.368975 36 3 0.5990062 251 7 0.5680008 151 7 0.7046828 539 7 0.629252 63 7 0.5054406 105 7 0.5289966 139 7 0.7047619 53 6 0.5476190 95 5 0.6901676 209 7 0.5798319 64 6 0.5857143 16 1 0.5275974 146 7 0.6139969 232 7 0.6951052 258 7 0.676297 506 7 0.5929886 120 7 0.39569971 133 7 0.6182051 54 5 0.5051020 29 2 0.6769730 57 5 0.4440724 226 7 0.5633264 132 7 0.5409967 225 7 0.6072566 183 7 0.6188882 111 7 0.5602384 180 7 0.6274599 0.5161126 0.4461707 0.6886052 0.4462190 0.6511723 0.5606929 0.59432460 0.6284958 0.6392700 0.6673078 0.3961864 0.4794625 NA 0.6123890 0.85019992 0.50415169 0.5277835 0.51020420 0.6807562 0.5772801 0.3764949 0.4940426 0.6440678 0.4844633 0.6652027 0.5253525 0.5677966 0.5911980 0.6176077 0.6739865 0.6082872 0.5929052 0.3098020 0.42291566 0.37439467 0.6097398 0.2583902 0.4927904 0.4249104 0.4912800 0.5851304 0.5400044 2 0.6686449 0.6495228 0.00747382 7 0.655979 0.651147 0.00483194 0.5802773 4.2838e-01 insignificant 1.00000 1.000000 insignificant 0.535854 4.9931e-01 insignificant 1 1.000000 insignificant -0.0032583 0.92779218 lowCoverage 1.00000 lowCoverage 0.6686449 0.4168013 0.21341594 7 0.655979 0.4963483 0.15963022 1.5753e-07 9.9998e-01 hypermethylated 2.4613e-06 1.0000e+00 hypermethylated 4.1264e-02 9.0400e-01 weaklyHypermeth 3.2750e-01 1.0000e+00 insignificant 0.06496655 2.4872e-01 lowCoverage 1.0000e+00 lowCoverage 0.6686449 0.5186522 0.12223702 7 0.655979 0.567537 0.0884416 4.3418e-05 8.8723e-01 weaklyHypermeth 2.4121e-03 1.0000e+00 weaklyHypermeth 2.9772e-02 8.7867e-01 weaklyHypermeth 7.1962e-01 1.00000000 insignificant 0.02566544 4.3893e-01 lowCoverage 1.0000e+00 lowCoverage 0.6495228 0.4168013 0.2132631 7 0.651147 0.4963483 0.1547983 1.9524e-06 9.9988e-01 hypermethylated 3.1490e-05 1.0000e+00 hypermethylated 1.1550e-02 9.5708e-01 weaklyHypermeth 1.1106e-01 1.0000e+00 insignificant 0.0682248 2.0443e-01 insignificant 1.0000e+00 insignificant 0.649523 0.5186522 0.10846641 7 0.6511466 0.567537 0.08360961 3.4400e-04 9.3303e-01 weaklyHypermeth 1.1862e-02 1.00000000 weaklyHypermeth 1.0902e-01 8.0138e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.02892372 2.7601e-01 insignificant 1.00000000 insignificant 0.4168013 0.5186522 -0.10403155 7 0.4963483 0.567537 -7.1189e-02 8.6891e-01 3.6511e-02 weaklyHypometh 1.0000e+00 2.4837e-01 insignificant 8.5016e-01 2.7029e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0393011 4.3226e-01 insignificant 1.0000e+00 insignificant chr17 35634050 35635050 50425 WIPF2 ENSG00000171475 0.7501167 123 6 0.5893519 59 6 0.3699405 90 6 0.7966346 141 6 0.6166667 33 4 0.6676643 117 6 0.6666667 15 1 0.6094794 89 6 0.62962963 39 6 0.638799 71 6 0.6552237 214 6 0.5000000 14 0 0.5820833 102 6 0.6666667 31 6 0.5631313 74 6 0.2500000 4 0 0.142857 7 0 0.6594778 175 6 0.6404494 139 6 0.6898148 101 1 0.903509 33 1 0.6966586 66 6 0.6248548 102 6 0.7583333 43 5 0.7405724 70 6 0.5950466 83 6 0.7317708 90 4 0.9423077 27 1 0.4523810 89 6 0.6457049 129 6 0.5221230 115 6 0.553570 113 6 0.6266667 52 6 0.63686869 84 6 0.7638889 80 6 0.5000000 12 0 0.5928571 83 6 0.6715706 110 6 0.6796846 103 6 0.6367424 150 6 0.6883117 131 6 0.7010582 65 6 0.7541249 123 6 0.7964669 0.6428303 0.4312259 0.8211019 0.7770270 0.7405072 0.6351351 0.63998614 0.7072072 0.7887855 0.7526321 0.4932432 0.6292568 0.81081081 0.6848894 NA 0.13513514 0.7564692 0.74066201 0.7849099 0.8990043 0.7084394 0.6363711 0.8581081 0.8370871 0.6966106 0.8025760 0.7750406 0.5634653 0.7458551 0.6262146 0.6799442 0.7524324 0.6384521 0.84234234 0.71621622 0.6182432 0.7765875 0.6924485 0.7110872 0.7648883 0.7526813 0.8194007 1 0.6786805 0.6892596 0.01067908 6 0.684163 0.652532 0.03163081 0.6888119 8.9978e-01 insignificant 1.00000 1.000000 insignificant 0.992309 4.9935e-01 insignificant 1 1.000000 insignificant -0.0963366 0.09398292 lowCoverage 1.00000 lowCoverage 0.6778934 0.7197150 -0.01847289 6 0.543805 0.7081275 -0.16432263 7.7762e-01 5.8242e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.7521e-01 4.0192e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04774266 3.5781e-01 lowCoverage 1.0000e+00 lowCoverage 0.6783088 0.6923077 -0.02308758 6 0.634439 0.683425 -0.0489858 6.2263e-01 1.0094e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.1327e-01 6.6049e-02 insignificant 1.0000e+00 1.00000000 insignificant -0.10775170 1.3915e-02 lowCoverage 3.9092e-01 lowCoverage 0.6890756 0.7183771 -0.0264094 6 0.620042 0.6594820 -0.0394397 8.6820e-01 2.2407e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.0193e-01 7.3055e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0485940 3.9264e-01 lowCoverage 1.0000e+00 lowCoverage 0.689076 0.6923077 -0.02283176 6 0.6200423 0.683425 -0.06338246 7.3701e-01 5.3530e-02 insignificant 1.0000e+00 1.00000000 insignificant 5.6625e-01 3.9915e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.01141506 8.0876e-01 lowCoverage 1.00000000 lowCoverage 0.7183771 0.6923077 0.00881256 6 0.6594820 0.683425 -2.3943e-02 8.9319e-01 4.9366e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.8558e-01 4.2236e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0600090 1.7732e-01 insignificant 1.0000e+00 insignificant chr17 35725850 35726850 50429 RARA ENSG00000131759 0.0089107 726 21 0.0053642 680 22 0.0128050 1000 22 0.0164633 653 18 0.0061701 740 20 0.0143030 1639 22 0.0139870 950 22 0.0159712 619 22 0.00717092 829 22 0.016096 809 22 0.0168317 879 22 0.0249366 887 22 0.0178601 896 22 0.0588095 119 5 0.0060569 854 22 0.0069306 945 22 0.019080 1317 22 0.0090235 695 22 0.0211447 963 22 0.0227710 1440 22 0.017486 330 21 0.0127265 572 18 0.0147391 577 22 0.0021142 457 22 0.0073343 376 18 0.0176069 1069 22 0.0102830 419 21 0.0049567 424 21 0.0112678 461 22 0.0087850 986 22 0.0123989 1391 22 0.015177 1056 22 0.0026556 650 22 0.00841568 567 22 0.0011364 590 19 0.0050505 345 18 0.0129706 239 14 0.0014663 645 22 0.0279264 906 22 0.0117828 952 22 0.0093802 653 21 0.0149132 829 18 0.0380471 810 18 0.0120071 0.0066657 0.0185905 0.0192904 0.0037130 0.0217073 0.0172753 0.02474980 0.0090453 0.0187248 0.0271104 0.0286845 0.0160697 NA 0.0061021 0.00381461 0.01911993 0.0134129 0.02014036 0.0188802 0.0301081 0.0135749 0.0222566 0.0019156 0.0156353 0.0212006 0.0142523 0.0064472 0.0144352 0.0075140 0.0115295 0.0210079 0.0052476 0.0122413 0.00155347 0.00369300 0.0199513 0.0020045 0.0277772 0.0137843 0.0111399 0.0172071 0.0319823 17 0.0157029 0.0126879 0.00303113 22 0.014762 0.011347 0.00341526 0.0209742 9.4180e-01 weaklyHypermeth 1.00000 1.000000 insignificant 0.026405 9.5947e-01 weaklyHypermeth 1 1.000000 insignificant 0.0047947 0.11617671 insignificant 1.00000 insignificant 0.0157029 0.0049407 0.01135533 22 0.014762 0.0041496 0.01061282 2.1620e-06 1.0000e+00 weaklyHypermeth 2.7367e-05 1.0000e+00 weaklyHypermeth 1.7874e-06 1.0000e+00 weaklyHypermeth 4.0623e-05 1.0000e+00 weaklyHypermeth 0.01075185 3.0553e-03 weaklyHypermeth 6.1105e-02 weaklyHypermeth 0.0157029 0.0192771 -0.00366009 21 0.014762 0.019676 -0.0049138 7.2212e-02 1.6005e-03 weaklyHypometh 1.0000e+00 8.8915e-02 weaklyHypometh 1.6384e-01 1.4265e-02 weaklyHypometh 1.0000e+00 0.49688888 insignificant -0.00437559 4.9623e-01 insignificant 1.0000e+00 insignificant 0.0126879 0.0049407 0.0080206 22 0.011347 0.0041496 0.0071976 9.4277e-04 9.9900e-01 weaklyHypermeth 8.8109e-03 1.0000e+00 weaklyHypermeth 2.0004e-03 9.9968e-01 weaklyHypermeth 2.4697e-02 1.0000e+00 weaklyHypermeth 0.0059571 2.8715e-02 weaklyHypermeth 3.4184e-01 insignificant 0.012688 0.0192771 -0.00695508 21 0.0113472 0.019676 -0.00832902 5.6383e-01 2.3931e-05 weaklyHypometh 1.0000e+00 0.00364674 weaklyHypometh 8.5999e-01 1.6009e-03 weaklyHypometh 1.0000e+00 0.3757099 insignificant -0.00917033 1.6991e-01 insignificant 1.00000000 insignificant 0.0049407 0.0192771 -0.01589121 21 0.0041496 0.019676 -1.5527e-02 1.0000e+00 1.1311e-06 weaklyHypometh 1.0000e+00 2.2622e-05 weaklyHypometh 1.0000e+00 5.1105e-05 weaklyHypometh 1.0000e+00 1.7035e-03 weaklyHypometh -0.0151274 4.7277e-02 weaklyHypometh 4.9765e-01 insignificant chr17 35755250 35756250 50433 RARA ENSG00000131759 0.0388918 462 13 0.1467689 550 13 0.1782504 670 15 0.0436582 455 9 0.1441624 544 13 0.1675414 891 13 0.1552810 894 13 0.0958967 469 13 0.01985248 870 13 0.146987 949 13 0.1927363 487 13 0.1632284 685 13 0.0151319 558 13 0.1299787 202 9 0.1541052 623 13 0.0768771 725 13 0.042472 952 9 0.0577274 980 12 0.0291206 792 13 0.0253463 839 13 0.050392 197 13 0.0192113 385 9 0.0925117 420 13 0.0404945 128 11 0.0613301 1083 9 0.1465475 608 15 0.1868620 340 13 0.0661765 203 13 0.1808820 528 13 0.1537942 771 13 0.1106915 1062 15 0.157045 715 13 0.0999447 547 13 0.15584005 605 15 0.0200000 197 8 0.0059172 534 7 0.1279341 231 13 0.1362460 736 15 0.2170708 455 13 0.0207061 397 13 0.0316129 410 9 0.0899472 742 13 0.0692612 346 9 0.0501457 0.0397610 0.0567344 0.0282672 0.0254856 0.0637301 0.0555289 0.03822445 0.0198098 0.0401981 0.0850108 0.0296569 0.0201173 0.04496559 0.0223225 0.07593283 0.03182755 0.0451207 0.03384007 0.0274880 0.0672811 0.0240522 0.0514266 0.0549050 0.0790631 0.0162750 0.0452158 0.0577957 0.0602517 0.0257833 0.0327724 0.0385232 0.0436603 0.0485575 0.03010006 0.00744417 0.0806102 0.0953289 0.0428995 0.0241082 0.0346485 0.0242110 0.0586902 9 0.0354490 0.0393224 0.00026698 13 0.132995 0.160633 -0.02763787 0.4894401 3.9290e-01 insignificant 1.00000 1.000000 insignificant 0.217188 8.5004e-01 insignificant 1 1.000000 insignificant -0.0042942 0.84558203 insignificant 1.00000 insignificant 0.0354568 0.0435393 -0.00658840 13 0.141307 0.1122103 0.02909662 1.3635e-03 2.4295e-01 inconclusive 1.1362e-02 1.0000e+00 inconclusive 8.0455e-04 9.9320e-01 inconclusive 1.1832e-02 1.0000e+00 inconclusive 0.01022037 7.3611e-01 insignificant 1.0000e+00 insignificant 0.0354594 0.0246914 0.00190785 12 0.150727 0.160724 -0.0099967 3.2015e-02 4.1627e-01 weaklyHypermeth 5.9288e-01 1.0000e+00 insignificant 3.0224e-02 6.9396e-01 weaklyHypermeth 7.1962e-01 1.00000000 insignificant 0.01548105 6.9799e-01 insignificant 1.0000e+00 insignificant 0.0391487 0.0435240 -0.0060205 13 0.131221 0.1056097 0.0256112 8.8086e-03 8.5176e-01 inconclusive 6.3830e-02 1.0000e+00 inconclusive 7.6705e-02 9.9893e-01 insignificant 5.8110e-01 1.0000e+00 insignificant 0.0145146 6.4829e-01 insignificant 1.0000e+00 insignificant 0.039179 0.0251064 0.00231427 12 0.1394221 0.213179 -0.07375663 8.4749e-02 6.9437e-01 insignificant 1.0000e+00 1.00000000 insignificant 1.7565e-01 7.3946e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.01977523 6.3007e-01 insignificant 1.00000000 insignificant 0.0435546 0.0246914 0.01426974 12 0.1196910 0.160724 -4.1033e-02 1.8884e-01 2.1093e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.3606e-01 2.8236e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0052607 9.0705e-01 insignificant 1.0000e+00 insignificant chr17 35908350 35909350 50440 TNS4 ENSG00000131746 0.5105655 76 7 0.4337067 169 6 0.5378610 108 5 0.5430255 69 5 0.5786816 87 5 0.6565855 171 7 0.5658832 78 8 0.6934684 162 6 0.48232601 66 5 0.712019 47 5 0.7014480 234 8 0.5092593 24 1 0.7470734 101 6 0.6531410 45 5 0.7395679 86 5 0.5925926 31 3 NA 0 0 0.6479001 105 7 0.7459436 275 7 0.6642904 112 5 0.669345 57 5 0.4870432 73 5 0.5989112 83 5 0.6584211 66 6 0.6955992 111 6 0.6629807 137 5 0.6565543 117 5 0.5474747 36 3 0.5700979 188 8 0.5911664 176 5 0.6676195 224 7 0.721526 155 7 0.4775796 206 7 0.52149060 163 7 0.5460432 301 6 0.3424242 52 5 0.6172906 204 7 0.5561147 270 7 0.6582267 104 7 0.4527077 137 7 0.7819335 99 8 0.5818750 88 7 0.5490067 90 5 0.7370040 0.5160004 0.6486448 0.7283258 0.6277093 0.7980644 0.7052035 0.70679202 0.5421422 0.7982002 0.7601400 0.5689103 0.8035943 0.80219839 0.8240990 0.73502012 NA 0.7868208 0.82364407 0.7797217 0.7190629 0.6646648 0.7429117 0.7942814 0.8531007 0.7777267 0.7251581 0.5789088 0.7310418 0.6559930 0.7313661 0.8093043 0.4930362 0.5576814 0.71534739 0.60594794 0.6407879 0.7294012 0.7246417 0.6300555 0.8748652 0.6065990 0.7236845 2 0.7106549 0.7109705 0.00018656 5 0.581996 0.596097 -0.01410177 0.6371372 3.3077e-01 insignificant 1.00000 1.000000 insignificant 0.699840 6.5360e-01 insignificant 1 1.000000 insignificant -0.0106315 0.72273327 insignificant 1.00000 insignificant 0.7114160 0.6822742 0.07433730 5 0.618735 0.5601307 0.05860474 7.3262e-06 4.9932e-01 weaklyHypermeth 8.8267e-05 1.0000e+00 weaklyHypermeth 3.8471e-04 4.7707e-01 weaklyHypermeth 6.2049e-03 1.0000e+00 weaklyHypermeth 0.10643962 4.0931e-02 weaklyHypermeth 4.7207e-01 insignificant 0.7106549 0.6351351 0.02527128 5 0.581996 0.572884 0.0091119 4.7975e-01 8.8292e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.2725e-01 8.8212e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.01184684 8.4952e-01 insignificant 1.0000e+00 insignificant 0.7119604 0.6822742 0.0669084 6 0.600786 0.5601307 0.0406550 2.1489e-05 1.2485e-01 weaklyHypermeth 2.6529e-04 1.0000e+00 weaklyHypermeth 2.5598e-03 5.1527e-01 weaklyHypermeth 2.9765e-02 1.0000e+00 weaklyHypermeth 0.1170712 2.7358e-02 weaklyHypermeth 3.3363e-01 insignificant 0.710970 0.6351351 0.03489367 6 0.5960975 0.572884 0.02321367 1.0651e-01 6.1791e-01 insignificant 1.0000e+00 1.00000000 insignificant 3.2459e-01 7.1206e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.02247837 7.1711e-01 insignificant 1.00000000 insignificant 0.6822742 0.6356589 -0.08128268 7 0.5601307 0.589080 -2.8949e-02 5.4777e-01 9.5496e-02 insignificant 1.0000e+00 5.8587e-01 insignificant 8.8805e-01 2.5753e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0945928 2.0010e-01 insignificant 1.0000e+00 insignificant chr17 35951350 35952350 50450 TNS4 ENSG00000131746 0.9377176 214 5 0.8971558 233 5 0.9041959 243 5 0.9476130 247 5 0.9250626 116 5 0.8498776 638 5 0.8770781 168 5 0.9340227 244 5 0.74760963 354 5 0.845748 246 5 0.9387550 168 5 0.8365431 125 5 0.8730429 250 5 0.9262540 150 5 0.9132500 286 5 0.8533333 84 5 0.844886 397 5 0.9194026 355 5 0.9185797 231 5 0.7626836 428 5 0.668803 67 5 0.9316913 136 5 0.8958740 245 5 0.9399634 134 5 0.8873737 55 5 0.9453388 267 5 0.8168346 133 5 0.8637243 128 5 0.8305216 225 5 0.9425306 351 5 0.9402903 453 5 0.945558 311 5 0.8063224 286 5 0.87757576 71 5 0.6666667 80 2 0.7709091 29 3 0.7730283 200 5 0.8330497 260 5 0.9383504 209 5 0.9573234 188 5 0.8969474 210 5 0.9505603 168 5 0.9244571 223 5 0.9303809 0.8984498 0.9078004 0.9497143 0.9225165 0.9213345 0.8669437 0.93722101 0.9007715 0.9211164 0.9413287 0.8574484 0.9532376 0.93549472 0.9192065 0.84188862 0.91895437 0.9278518 0.92645749 0.9218186 0.8116037 0.9441615 0.9061147 0.9409349 0.8960010 0.9521568 0.8399438 0.9504329 0.8844784 0.9539222 0.9431405 0.9391264 0.8218578 0.9208184 0.82524442 0.81854135 0.8526954 0.8683527 0.9451704 0.9579596 0.9223085 0.9606921 0.9408750 5 0.9237010 0.9241517 -0.00238262 5 0.841513 0.864431 -0.02291847 0.6701559 3.8245e-01 insignificant 1.00000 1.000000 insignificant 0.522058 1.8657e-01 insignificant 1 1.000000 insignificant -0.0014014 0.95890110 insignificant 1.00000 insignificant 0.9237010 0.8704104 0.05000877 5 0.841513 0.7892942 0.05221874 3.8616e-10 2.6896e-01 weaklyHypermeth 7.2861e-09 1.0000e+00 weaklyHypermeth 5.3855e-03 4.8159e-02 weaklyHypermeth 5.7909e-02 1.0000e+00 weaklyHypermeth 0.09471527 2.0744e-02 lowCoverage 2.6941e-01 lowCoverage 0.9237010 0.9559118 -0.03115960 5 0.841513 0.938299 -0.0967863 6.3497e-01 4.8792e-04 weaklyHypometh 1.0000e+00 3.0495e-02 weaklyHypometh 9.2505e-01 3.9484e-04 weaklyHypometh 1.0000e+00 0.05640633 weaklyHypometh -0.05088713 7.2102e-03 weaklyHypometh 2.5751e-01 insignificant 0.9241517 0.8704104 0.0553809 5 0.864431 0.7892942 0.0751372 1.6706e-06 8.8152e-01 weaklyHypermeth 2.7387e-05 1.0000e+00 weaklyHypermeth 1.1983e-02 7.7545e-01 weaklyHypermeth 1.1412e-01 1.0000e+00 insignificant 0.0961167 2.5945e-02 lowCoverage 3.2431e-01 lowCoverage 0.924152 0.9559118 -0.02446943 5 0.8644314 0.938299 -0.07386786 8.6475e-01 8.5002e-02 insignificant 1.0000e+00 1.00000000 insignificant 9.7913e-01 8.7196e-02 insignificant 1.0000e+00 1.0000000 insignificant -0.04948570 7.6914e-02 insignificant 1.00000000 insignificant 0.8704104 0.9559118 -0.06774648 5 0.7892942 0.938299 -1.4901e-01 9.9995e-01 1.9559e-05 weaklyHypometh 1.0000e+00 3.5562e-04 weaklyHypometh 9.9881e-01 7.4359e-03 weaklyHypometh 1.0000e+00 1.0049e-01 insignificant -0.1456024 3.0053e-03 lowCoverage 8.1830e-02 lowCoverage chr17 36469150 36470150 50462 KRTAP2-1 ENSG00000212724 0.8555707 558 10 0.6955542 130 10 0.7340352 268 10 0.8842482 362 10 0.8335427 176 9 0.8917190 826 10 0.7041174 149 10 0.7827056 244 10 0.83082680 134 8 0.858107 247 10 0.8690747 372 10 0.9100649 93 9 0.8429248 222 10 0.9286905 155 8 0.9052380 282 10 0.8144298 143 8 0.000000 1 0 0.7830954 713 10 0.8243937 997 10 0.9123144 1018 10 0.778770 91 8 0.8359965 173 10 0.9133953 240 9 0.7563187 82 8 0.8536842 75 7 0.7431108 287 10 0.8980885 250 10 0.8212227 67 8 0.8231015 339 8 0.9029526 216 10 0.8916426 353 10 0.924151 482 10 0.6299491 259 10 0.67459824 514 10 0.5886687 264 10 0.7375000 25 2 0.5843587 133 10 0.5390355 563 10 0.7405101 573 10 0.9220972 447 10 0.9229777 543 10 0.8901991 1001 10 0.8670163 471 10 0.8307138 0.6752919 0.7680026 0.9124510 0.7880038 0.8895953 0.6582486 0.89236661 0.8351925 0.8677177 0.8940360 0.8661717 0.7866254 0.91357960 0.8984510 0.76798246 NA 0.8529369 0.80460036 0.9089928 0.9278361 0.8343414 0.8995155 0.8953297 0.8491409 0.8299861 0.9055507 0.7879854 0.8190428 0.8742324 0.8653657 0.9135233 0.6714629 0.6702966 0.53274168 0.68409689 0.5475458 0.5150386 0.8741525 0.9222553 0.8976991 0.8757238 0.8392126 7 0.8602879 0.8647325 -0.01537689 10 0.829527 0.697788 0.13173953 0.9877550 1.3405e-01 insignificant 1.00000 1.000000 insignificant 0.953333 5.5333e-03 weaklyHypometh 1 0.553330 insignificant -0.0521702 0.28666778 insignificant 1.00000 insignificant 0.8600254 0.6042141 0.24969470 10 0.722384 0.5841253 0.13825886 5.4821e-34 1.0000e+00 hypermethylated 3.9158e-32 1.0000e+00 hypermethylated 3.1615e-09 1.0000e+00 hypermethylated 1.2646e-07 1.0000e+00 hypermethylated 0.16734762 4.4891e-03 weaklyHypermeth 8.4701e-02 weaklyHypermeth 0.8602484 0.9113674 -0.03591791 10 0.801115 0.791420 0.0096949 9.9805e-01 4.4334e-03 weaklyHypometh 1.0000e+00 1.7940e-01 insignificant 9.9650e-01 2.7970e-03 weaklyHypometh 1.0000e+00 0.21515671 insignificant -0.07552741 1.9162e-01 insignificant 1.0000e+00 insignificant 0.8660377 0.6043330 0.2715074 10 0.814085 0.5981462 0.2159392 1.3142e-27 1.0000e+00 hypermethylated 9.3870e-26 1.0000e+00 hypermethylated 1.6986e-11 1.0000e+00 hypermethylated 2.4266e-09 1.0000e+00 hypermethylated 0.2195178 1.2663e-04 hypermethylated 3.8372e-03 hypermethylated 0.865987 0.9116386 -0.02096457 10 0.7971841 0.817913 -0.02072865 9.9941e-01 9.8134e-02 insignificant 1.0000e+00 1.00000000 insignificant 9.3479e-01 7.5438e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.02335718 5.6214e-01 insignificant 1.00000000 insignificant 0.6043330 0.9113674 -0.28312050 10 0.5981462 0.791420 -1.9327e-01 1.0000e+00 9.1146e-18 hypomethylated 1.0000e+00 1.8229e-15 hypomethylated 1.0000e+00 6.1393e-08 hypomethylated 1.0000e+00 1.5348e-05 hypomethylated -0.2428750 5.0431e-04 hypomethylated 2.2923e-02 hypomethylated chr17 37075150 37076150 50476 KRT42P ENSG00000214514 0.2960055 203 17 0.2133637 520 17 0.0744953 761 20 0.2017186 170 11 0.1115801 619 16 0.3427272 496 20 0.0970222 878 19 0.2177860 466 19 0.23652597 530 16 0.161281 587 15 0.2289968 757 20 0.2567954 672 13 0.2821618 544 16 0.3978962 69 6 0.2257580 653 16 0.0934494 1094 14 0.019309 1080 13 0.1431216 251 16 0.2301507 836 19 0.3732149 326 19 0.237663 224 18 0.2853073 99 9 0.2853684 427 20 0.1603423 185 16 0.2364504 325 7 0.2312538 719 18 0.2735881 223 14 0.1247234 151 15 0.2753467 431 19 0.2003400 765 20 0.2932251 1013 22 0.243137 292 20 0.0088691 577 20 0.00975411 580 19 0.1077694 399 14 0.1238095 50 4 0.0995355 266 17 0.1430585 483 20 0.1918498 157 13 0.2449940 241 20 0.3888654 165 8 0.2285965 96 3 0.2442359 130 11 0.1839597 0.1256215 0.0742696 0.1635290 0.0860170 0.2635929 0.1088559 0.18610771 0.1478847 0.1578240 0.1713755 0.1381720 0.1745431 0.15778340 0.1254409 0.10256496 0.14288048 0.1548789 0.17788219 0.2900466 0.1995827 0.2921987 0.2015386 0.1466579 0.1669895 0.1634109 0.1248223 0.0920571 0.1866239 0.1180504 0.1781906 0.2048731 0.0124166 0.0096229 0.01516640 0.11560868 0.0589492 0.1156560 0.1869427 0.2099879 0.2943509 0.1476969 0.2093373 1 0.0974020 0.1984307 -0.01337575 19 0.235825 0.281779 -0.04595339 0.9636822 1.3817e-01 insignificant 1.00000 1.000000 insignificant 0.802773 4.1554e-01 insignificant 1 1.000000 insignificant -0.0270608 0.32835856 insignificant 1.00000 insignificant 0.0973405 0.0594985 0.10646257 19 0.232075 0.0777825 0.15429248 6.5883e-18 9.7096e-01 weaklyHypermeth 1.9965e-16 1.0000e+00 weaklyHypermeth 5.9061e-09 9.9995e-01 weaklyHypermeth 2.0366e-07 1.0000e+00 weaklyHypermeth 0.12803526 1.4394e-03 weaklyHypermeth 3.2715e-02 weaklyHypermeth 0.0964034 0.3066158 0.00164520 9 0.196042 0.262669 -0.0666277 2.0227e-01 6.0743e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.8106e-01 8.7561e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.04954037 2.5652e-01 insignificant 1.0000e+00 insignificant 0.1982652 0.0594985 0.1558006 20 0.254155 0.0777825 0.1763723 5.2050e-16 9.9996e-01 weaklyHypermeth 1.6790e-14 1.0000e+00 weaklyHypermeth 9.0084e-07 1.0000e+00 weaklyHypermeth 2.9059e-05 1.0000e+00 weaklyHypermeth 0.1550961 3.5526e-04 weaklyHypermeth 9.3488e-03 weaklyHypermeth 0.197104 0.3045685 0.01772643 10 0.2294295 0.204003 0.02542694 2.2067e-01 9.9345e-01 insignificant 1.0000e+00 1.00000000 insignificant 8.4967e-01 9.9626e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.02247953 5.6655e-01 insignificant 1.00000000 insignificant 0.0592751 0.3057325 -0.24015686 10 0.0734353 0.230612 -1.5718e-01 1.0000e+00 1.2464e-06 hypomethylated 1.0000e+00 2.4439e-05 hypomethylated 1.0000e+00 1.7293e-04 hypomethylated 1.0000e+00 4.4341e-03 hypomethylated -0.1775756 3.0277e-03 weaklyHypometh 8.1830e-02 weaklyHypometh chr17 37092250 37093250 50478 KRT42P ENSG00000214514 0.7137610 221 7 0.6741143 245 10 0.7473007 145 6 0.7101128 194 8 0.7677249 130 8 0.8280895 487 8 0.7665205 170 7 0.7983988 204 8 0.76594853 88 7 0.782639 63 5 0.7722139 377 11 0.9059829 35 2 0.8405556 103 7 0.7000000 66 5 0.8464802 116 7 0.7678571 65 2 1.000000 44 1 0.8374093 382 7 0.7852593 292 7 0.8075322 338 7 0.694641 103 6 0.8333333 60 5 0.7483432 88 5 0.8125000 83 9 0.7664097 326 8 0.8380621 263 8 0.6784917 86 6 0.7000000 21 0 0.8212847 236 8 0.8298727 265 9 0.8573856 260 8 0.780494 217 8 0.5563473 190 7 0.72474558 188 8 0.7552381 233 9 0.8661538 141 2 0.6930101 153 8 0.7167437 231 8 0.7688046 237 8 0.7875365 258 8 0.7863067 220 7 0.6813462 151 5 0.7552132 204 8 0.8065409 0.7940747 0.7594903 0.8114622 0.8311539 0.8553604 0.8159994 0.83349637 0.8219425 0.8446796 0.8229400 0.8354957 0.8874192 0.88835979 0.8461973 0.89153439 NA 0.8882389 0.84682956 0.8125310 0.8038930 0.8927690 0.8145315 0.6895944 0.8337020 0.8443762 0.7031830 0.7204586 0.8027771 0.8721436 0.8467472 0.8356693 0.7184356 0.6037266 0.80266004 0.82889703 0.7696120 0.5806803 0.8650468 0.8600792 0.8577461 0.8234873 0.8087636 2 0.8342189 0.8346614 0.00985219 7 0.842843 0.841820 0.00102273 0.7291736 9.0111e-01 insignificant 1.00000 1.000000 insignificant 0.630679 9.5173e-01 insignificant 1 1.000000 insignificant 0.0108269 0.66214734 insignificant 1.00000 insignificant 0.8341749 0.6792952 0.15935511 7 0.831617 0.7074147 0.12420256 8.4796e-08 9.9974e-01 weaklyHypermeth 1.3651e-06 1.0000e+00 weaklyHypermeth 2.3412e-02 9.9940e-01 weaklyHypermeth 2.1255e-01 1.0000e+00 insignificant 0.07218857 1.4759e-01 insignificant 1.0000e+00 insignificant 0.8318896 0.8084112 -0.01154819 7 0.758844 0.789306 -0.0304614 7.0577e-01 7.2480e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 5.3519e-01 1.8280e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.03505356 2.0037e-01 insignificant 1.0000e+00 insignificant 0.8345790 0.6792952 0.1515934 7 0.830521 0.7074147 0.1231068 9.4042e-06 9.9995e-01 weaklyHypermeth 1.2708e-04 1.0000e+00 weaklyHypermeth 1.9843e-01 9.9806e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0613617 2.1179e-01 insignificant 1.0000e+00 insignificant 0.831800 0.8084112 -0.01910785 7 0.7711483 0.789306 -0.01815732 7.9901e-01 9.8377e-02 insignificant 1.0000e+00 1.00000000 insignificant 7.7160e-01 2.0716e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.02422670 3.8161e-01 insignificant 1.00000000 insignificant 0.6742081 0.8084112 -0.16108712 7 0.6367477 0.789306 -1.5256e-01 9.9895e-01 2.4495e-05 weaklyHypometh 1.0000e+00 4.3615e-04 weaklyHypometh 9.8925e-01 3.6677e-02 weaklyHypometh 1.0000e+00 3.4278e-01 insignificant -0.0371350 4.3923e-01 insignificant 1.0000e+00 insignificant chr17 37210750 37211750 50481 JUP ENSG00000173801 0.3389744 95 4 0.1146757 191 5 0.2214096 181 5 0.3196365 95 4 0.1943250 134 5 0.4093789 242 5 0.2619931 131 5 0.2379345 113 5 0.25025253 116 5 0.282032 86 4 0.2942181 183 5 0.2902593 77 4 0.2408676 102 4 0.4884314 83 3 0.2439087 148 4 0.3923450 81 4 0.250000 4 0 0.3694794 89 3 0.1522441 206 4 0.1931552 156 5 0.162540 78 5 0.1058824 43 2 0.2323529 100 4 0.1634127 95 5 0.2121212 39 3 0.4283564 194 5 0.1183740 157 5 0.2611111 87 5 0.1318267 92 2 0.2811900 190 5 0.2759008 244 5 0.341935 118 5 0.0652714 98 5 0.05803698 101 4 0.0000000 107 4 0.0000000 5 0 0.0246679 131 5 0.0936170 156 5 0.3678571 86 3 0.4109724 94 4 0.2800000 73 4 0.4603261 111 2 0.4782230 80 4 0.4046585 0.1777134 0.2716815 0.2686752 0.2541890 0.4599306 0.3648467 0.37669534 0.3152253 0.2784679 0.3545420 0.2791352 0.2891236 0.40871190 0.2576201 0.32700370 0.27034870 0.2664878 0.19456405 0.3284530 0.2011473 0.1590232 0.2549306 0.1502134 0.2446745 0.3396318 0.1408412 0.3132288 0.2581502 0.2998624 0.3519790 0.3971827 0.0650134 0.0511669 0.00000000 0.01349172 0.0170120 0.0718348 0.3072843 0.3734815 0.3287129 0.4934675 0.3997482 2 0.2837246 0.2644398 0.01644311 5 0.214118 0.373073 -0.15895447 0.6315187 9.4085e-01 insignificant 1.00000 1.000000 insignificant 0.190943 9.7478e-01 insignificant 1 1.000000 insignificant 0.0510258 0.15442811 lowCoverage 1.00000 lowCoverage 0.2838376 0.0668896 0.22096360 5 0.256942 0.0516397 0.20530222 2.7560e-11 1.0000e+00 hypermethylated 5.8639e-10 1.0000e+00 hypermethylated 7.6401e-09 1.0000e+00 hypermethylated 2.5467e-07 1.0000e+00 hypermethylated 0.23701051 8.0909e-09 lowCoverage 6.2237e-07 lowCoverage 0.2837246 0.3783784 -0.06703154 4 0.214118 0.338963 -0.1248452 9.7282e-01 6.3687e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.6410e-01 8.6415e-02 lowCoverage 1.0000e+00 1.00000000 lowCoverage -0.12219966 2.0851e-02 lowCoverage 5.2126e-01 lowCoverage 0.2639276 0.0668896 0.2109829 5 0.247687 0.0516397 0.1960476 5.4257e-12 1.0000e+00 hypermethylated 1.3564e-10 1.0000e+00 hypermethylated 3.5054e-06 9.9999e-01 hypermethylated 8.9882e-05 1.0000e+00 hypermethylated 0.1859847 3.0837e-05 lowCoverage 1.0633e-03 lowCoverage 0.264440 0.3783784 -0.08732358 4 0.3730727 0.338963 0.03410926 8.9356e-01 6.3765e-02 lowCoverage 1.0000e+00 1.00000000 lowCoverage 9.6758e-01 4.6426e-02 lowCoverage 1.0000e+00 1.0000000 lowCoverage -0.17322549 3.8892e-03 lowCoverage 0.38891796 lowCoverage 0.0668896 0.3778281 -0.30606494 4 0.0516397 0.306756 -2.5512e-01 1.0000e+00 8.6278e-11 lowCoverage 1.0000e+00 3.4511e-09 lowCoverage 1.0000e+00 1.0222e-04 lowCoverage 1.0000e+00 3.0977e-03 lowCoverage -0.3592102 1.4524e-04 lowCoverage 8.5434e-03 lowCoverage chr17 37415750 37416750 50486 CNP ENSG00000173786 0.5496835 160 5 0.7314464 91 5 0.6825475 73 5 0.7079441 110 5 0.7496032 54 5 0.7479428 323 7 0.7451164 105 6 0.5267191 82 5 0.67582563 90 5 0.448385 95 5 0.5919941 189 5 0.4844976 56 4 0.6080258 131 5 0.5535714 11 1 0.5705355 85 5 0.4768908 69 4 0.386508 37 4 0.4225960 118 5 0.6562480 118 5 0.5323342 231 7 0.805933 58 4 0.8095238 71 4 0.7755952 144 5 0.8326531 51 5 0.6068182 49 5 0.7903539 167 5 0.6642857 44 4 0.6679894 55 4 0.7344104 61 5 0.6223110 155 5 0.7403932 158 7 0.711712 294 8 0.6474303 121 5 0.49406593 73 5 0.6987810 79 5 0.7629067 91 4 0.5116909 69 5 0.6781450 170 7 0.7495748 133 5 0.6439925 186 5 0.7560800 134 5 0.7747364 187 5 0.5166051 135 5 0.6886333 0.7073706 0.6169279 0.7372035 0.8070988 0.7134395 0.7009539 0.73591392 0.6625189 0.7594899 0.7082378 0.6203657 0.6897883 0.66052223 0.6972682 0.57954545 0.48615119 0.5971235 0.73736981 0.7230921 0.7931631 0.8240741 0.6901756 0.8411255 0.7101043 0.7976340 0.7659933 0.8570627 0.7676066 0.6863582 0.7511518 0.7775478 0.5148433 0.5541681 0.72345455 0.67519196 0.6374677 0.5903313 0.7376443 0.7365120 0.7278644 0.7255559 0.7801680 4 0.6826750 0.7597552 -0.07196360 5 0.623866 0.722679 -0.09881355 0.9999064 4.6243e-05 weaklyHypometh 1.00000 0.023122 weaklyHypometh 0.999999 1.2729e-05 weaklyHypometh 1 0.012729 weaklyHypometh -0.1377442 0.00032576 lowCoverage 0.32576 lowCoverage 0.6826750 0.5688226 0.11081227 5 0.623866 0.6627039 -0.03883829 2.6308e-04 2.8258e-02 weaklyHypermeth 2.5542e-03 1.0000e+00 weaklyHypermeth 1.1271e-01 3.2493e-02 inconclusive 7.5938e-01 1.0000e+00 insignificant -0.03974922 4.5453e-01 lowCoverage 1.0000e+00 lowCoverage 0.6826750 0.7070968 -0.03446926 5 0.623866 0.576412 0.0474534 7.7785e-01 2.0803e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8055e-01 1.6397e-02 weaklyHypometh 1.0000e+00 0.49688888 insignificant -0.09577702 1.2890e-01 lowCoverage 1.0000e+00 lowCoverage 0.7597552 0.5688226 0.1811217 5 0.722679 0.6627039 0.0599753 1.0278e-05 5.7974e-01 weaklyHypermeth 1.3704e-04 1.0000e+00 weaklyHypermeth 5.7985e-03 8.6558e-01 weaklyHypermeth 5.9778e-02 1.0000e+00 weaklyHypermeth 0.0979950 8.2178e-02 insignificant 6.9643e-01 insignificant 0.759755 0.7070968 0.03590107 5 0.7226792 0.576412 0.14626693 1.9219e-02 9.9273e-01 weaklyHypermeth 4.0041e-01 1.00000000 insignificant 2.5699e-01 9.2372e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.04196723 4.6284e-01 insignificant 1.00000000 insignificant 0.5688226 0.7070968 -0.15419103 5 0.6627039 0.576412 8.6292e-02 6.4185e-01 8.4131e-03 weaklyHypometh 1.0000e+00 7.8627e-02 weaklyHypometh 6.7217e-01 5.7038e-02 insignificant 1.0000e+00 4.7672e-01 insignificant -0.0560278 4.1493e-01 insignificant 1.0000e+00 insignificant chr17 38038850 38039850 50516 TUBG1 ENSG00000131462 0.8087912 99 7 0.8088435 77 7 0.7018315 62 7 0.9869615 65 5 0.6615079 61 7 0.8728582 240 7 0.6896259 39 4 0.6921932 77 7 0.56755051 47 4 0.759235 39 4 0.6965334 151 7 0.9155844 35 3 0.7251443 56 7 0.9500000 11 1 0.7283859 58 7 0.7118056 30 3 0.839596 32 3 0.9039889 59 5 0.9501742 67 4 0.7675051 249 7 0.735417 58 5 0.8367347 58 4 0.7088435 76 7 0.7296843 60 5 0.8238095 38 5 0.8730655 98 7 0.6469959 85 6 0.7910401 43 3 0.7698413 42 3 0.7316017 64 4 0.7196242 106 7 0.713451 253 7 0.7628720 75 6 0.76111111 54 7 0.7144873 145 7 0.8291667 20 2 0.5697974 129 6 0.7102092 81 7 0.7689342 90 7 0.8018315 89 7 0.8168785 73 5 0.7434783 69 4 0.7683081 104 7 0.8229086 0.8183742 0.7159026 0.9824435 0.6778339 0.8702754 0.7380952 0.78599549 0.6539129 0.7801755 0.6974543 0.9044995 0.8308044 0.83489914 0.7379772 0.75594771 0.80896271 0.9086974 0.94116778 0.8097788 0.8434343 0.7991021 0.7088985 0.8532112 0.8451178 0.8558442 0.6689640 0.9089896 0.7351291 0.7159474 0.7202035 0.8226083 0.7325077 0.7104377 0.69723173 0.78699495 0.5404249 0.7208754 0.7373096 0.7909609 0.8186365 0.7182111 0.8036807 0 0.8069498 0.8032620 0.00437395 7 0.745951 0.707218 0.03873220 0.5357813 8.6039e-01 insignificant 1.00000 1.000000 insignificant 0.643076 6.9926e-01 insignificant 1 1.000000 insignificant 0.0302301 0.34451740 insignificant 1.00000 insignificant 0.8069498 0.7638889 0.07028271 7 0.745951 0.7527143 -0.00676376 5.3029e-05 8.0727e-01 weaklyHypermeth 5.5820e-04 1.0000e+00 weaklyHypermeth 1.7657e-03 8.5339e-01 weaklyHypermeth 2.3233e-02 1.0000e+00 weaklyHypermeth 0.06229852 1.8310e-01 insignificant 1.0000e+00 insignificant 0.8086619 0.8305882 0.01453372 7 0.791290 0.780362 0.0109282 3.2014e-01 8.6427e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.7414e-01 8.9623e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.00701970 8.0852e-01 insignificant 1.0000e+00 insignificant 0.8032620 0.7638889 0.0662213 7 0.707218 0.7527143 -0.0454960 2.9429e-03 7.3230e-01 weaklyHypermeth 2.4524e-02 1.0000e+00 weaklyHypermeth 1.8214e-02 8.9868e-01 weaklyHypermeth 1.6263e-01 1.0000e+00 insignificant 0.0320684 4.4768e-01 insignificant 1.0000e+00 insignificant 0.808839 0.8305882 0.01403014 7 0.7903924 0.780362 0.01003014 5.2424e-01 8.4901e-01 insignificant 1.0000e+00 1.00000000 insignificant 1.7861e-01 9.5429e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.02321038 3.2244e-01 insignificant 1.00000000 insignificant 0.7629482 0.8305882 -0.06260327 7 0.7173878 0.780362 -6.2974e-02 9.7558e-01 5.3094e-02 insignificant 1.0000e+00 3.4702e-01 insignificant 9.5987e-01 1.3340e-01 insignificant 1.0000e+00 9.1367e-01 insignificant -0.0552788 1.9292e-01 insignificant 1.0000e+00 insignificant chr17 38963450 38964450 50526 DHX8 ENSG00000067596 0.0846700 236 6 0.0530286 288 6 0.0393218 355 6 0.0869302 258 5 0.1210526 191 6 0.0947917 675 6 0.0551641 304 6 0.0300991 371 6 0.04506853 559 6 0.053255 405 6 0.1075121 232 6 0.0416183 323 6 0.0620188 350 6 0.0290427 237 5 0.0666551 427 6 0.0204812 243 6 0.067755 237 6 0.0706301 316 6 0.0839974 271 6 0.0762535 524 6 0.117659 81 6 0.0242105 186 5 0.0920080 277 6 0.0387051 148 6 0.1031746 117 6 0.0862916 368 6 0.0627880 181 6 0.0796436 211 6 0.0975061 221 6 0.0545934 408 6 0.0947662 539 6 0.087675 329 6 0.2689126 236 6 0.35634785 149 6 0.5175493 82 3 0.1500000 23 2 0.4367049 185 6 0.0868001 245 6 0.0381944 272 6 0.0597053 230 6 0.1911386 229 6 0.1464776 212 6 0.1311169 249 6 0.0528006 0.0158027 0.0219911 0.0492695 0.0836402 0.0885049 0.0256655 0.00910975 0.0195815 0.0353987 0.0626733 0.0231501 0.0302887 0.03614721 0.0322666 0.02455358 0.03444802 0.0339208 0.07213267 0.0457427 0.1082955 0.0309094 0.0627972 0.0147265 0.0505006 0.0509305 0.0313368 0.0366073 0.0461742 0.0265523 0.0804829 0.0289562 0.3024841 0.3743185 0.38606591 0.14204947 0.4720919 0.0952821 0.0327749 0.0567014 0.1508911 0.0914407 0.1066944 5 0.0543958 0.0681670 -0.01260041 6 0.062988 0.078118 -0.01513047 0.4331703 5.4360e-02 insignificant 1.00000 1.000000 insignificant 0.384259 3.0167e-01 insignificant 1 1.000000 insignificant -0.0137844 0.18162092 insignificant 1.00000 insignificant 0.0543958 0.2804348 -0.22418148 6 0.062988 0.2759372 -0.21294937 7.4935e-02 5.3982e-19 hypomethylated 4.3315e-01 1.3496e-16 hypomethylated 2.9324e-01 1.4133e-07 hypomethylated 1.0000e+00 2.8265e-05 hypomethylated -0.23825185 1.6879e-02 lowCoverage 2.2520e-01 lowCoverage 0.0543958 0.0721477 -0.03062217 6 0.062988 0.108254 -0.0452661 5.5065e-01 3.4306e-03 weaklyHypometh 1.0000e+00 1.6336e-01 insignificant 6.6414e-01 2.8015e-02 weaklyHypometh 1.0000e+00 0.68873866 insignificant -0.04885929 1.6020e-01 insignificant 1.0000e+00 insignificant 0.0681670 0.2804348 -0.2103611 6 0.078118 0.2759372 -0.1978189 4.8537e-03 7.8221e-12 hypomethylated 3.7920e-02 1.9555e-09 hypomethylated 5.2192e-01 1.7311e-07 hypomethylated 1.0000e+00 4.3277e-05 hypomethylated -0.2244674 2.0942e-02 lowCoverage 2.7198e-01 lowCoverage 0.068167 0.0721477 -0.02846076 6 0.0781183 0.108254 -0.03013565 1.2820e-01 9.7662e-03 weaklyHypometh 1.0000e+00 0.39859090 insignificant 5.2632e-01 1.7402e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant -0.03507484 2.8989e-01 insignificant 1.00000000 insignificant 0.2804348 0.0721477 0.17264631 6 0.2759372 0.108254 1.6768e-01 5.9954e-04 7.4294e-01 weaklyHypermeth 6.6616e-02 1.0000e+00 weaklyHypermeth 3.4663e-03 7.1096e-01 weaklyHypermeth 3.4663e-01 1.0000e+00 insignificant 0.1893926 3.8358e-02 lowCoverage 4.4602e-01 lowCoverage chr17 39110450 39111450 50539 MEOX1 ENSG00000005102 0.0166667 276 9 0.0079365 178 9 0.0083185 253 9 0.0116959 392 9 0.0263533 92 9 0.0429089 586 9 0.0137198 180 9 0.0346700 216 9 0.02777778 173 9 0.022222 205 9 0.0185185 165 9 0.0000000 169 9 0.0059270 275 9 NA 0 0 0.0063544 251 9 0.0249158 108 9 0.011724 2670 9 0.0147516 358 9 0.0079365 230 9 0.0143427 537 9 0.019841 121 9 0.0037037 276 9 0.0644470 305 9 0.0193034 136 9 0.0171180 169 9 0.0060060 236 9 0.0134680 188 9 0.0185185 100 9 0.0299220 154 9 0.0031746 272 9 0.0144215 444 9 0.025557 401 9 0.0400910 156 9 0.01010101 146 9 0.0000000 1 0 0.0000000 168 9 0.0000000 70 9 0.0297101 221 9 0.0099046 402 9 0.0040043 357 9 0.0111565 326 9 0.0133333 356 9 0.0045351 318 9 0.0166667 0.0063591 0.0081266 0.0146017 0.0316929 0.0450750 0.0169484 0.02908669 0.0291580 0.0277433 0.0220842 0.0000000 0.0054028 NA 0.0075069 0.02884748 0.01214436 0.0162561 0.00776398 0.0140016 0.0224046 0.0029676 0.0593646 0.0227233 0.0184480 0.0074982 0.0138026 0.0231194 0.0316244 0.0039633 0.0168676 0.0282154 0.0407819 0.0103520 NA 0.00000000 0.0000000 0.0250473 0.0103510 0.0049239 0.0138437 0.0106832 0.0054929 9 0.0131255 0.0217702 -0.00724083 9 0.014012 0.020617 -0.00660531 0.9995426 2.0514e-02 weaklyHypometh 1.00000 0.977643 insignificant 0.995690 3.3435e-01 insignificant 1 1.000000 insignificant -0.0029529 0.58675931 insignificant 1.00000 insignificant 0.0131255 0.0183727 -0.00374500 9 0.014012 0.0194323 -0.00542073 5.9244e-01 4.6447e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.7103e-01 9.7219e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00335350 6.7220e-01 insignificant 1.0000e+00 insignificant 0.0131255 0.0090961 0.00367280 9 0.014012 0.009256 0.0047556 3.4016e-01 4.0618e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.3934e-01 5.8105e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.00808374 1.7676e-02 weaklyHypermeth 4.6516e-01 insignificant 0.0217702 0.0183727 0.0037317 9 0.020617 0.0194323 0.0011846 6.8803e-02 8.0284e-01 insignificant 4.0236e-01 1.0000e+00 insignificant 9.5795e-02 9.9311e-01 insignificant 6.8425e-01 1.0000e+00 insignificant 0.0063064 4.7873e-01 insignificant 1.0000e+00 insignificant 0.021770 0.0090961 0.01190157 9 0.0206169 0.009256 0.01136095 8.6277e-02 9.9354e-01 insignificant 1.0000e+00 1.00000000 insignificant 8.5796e-02 9.9141e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.01103665 4.7154e-02 weaklyHypermeth 1.00000000 insignificant 0.0183727 0.0090961 0.00844044 9 0.0194323 0.009256 1.0176e-02 6.9443e-01 9.0050e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3065e-01 8.7464e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0047302 5.4618e-01 insignificant 1.0000e+00 insignificant chr17 39153150 39154150 50541 MEOX1 ENSG00000005102 0.1214854 546 26 0.0921496 322 9 0.1634478 419 9 0.0927022 261 24 0.1151959 430 9 0.2783938 441 28 0.1170884 492 9 0.0686186 367 9 0.08855423 484 9 0.103549 357 9 0.1123731 417 9 0.0831753 528 9 0.0633575 469 9 NA 0 0 0.0498134 352 9 0.0870168 646 9 0.260855 1586 15 0.2224278 367 23 0.3228813 712 19 0.1576242 460 24 0.139850 133 9 0.0939394 30 3 0.1445245 274 18 0.0921393 79 7 0.0000000 9 0 0.1733245 716 25 0.0934982 111 8 0.1303558 76 7 0.0507312 318 9 0.2252280 671 23 0.2031288 901 25 0.195745 484 24 0.0063983 420 9 0.02937788 329 9 0.1112061 362 17 0.2449025 235 8 0.0780423 70 8 0.2229256 569 25 0.1271823 489 26 0.1474747 486 28 0.1192308 289 21 0.0899153 457 23 0.1926263 330 24 0.1231912 0.1172024 0.1972777 0.0125562 0.1639664 0.1444448 0.1284730 0.06961469 0.1149675 0.1072389 0.1458687 0.0953685 0.0442213 NA 0.0411547 0.09301087 0.07251912 0.0821744 0.04068852 0.0907974 0.1112287 0.0926832 0.1202965 0.1112176 0.0000000 0.1037011 0.1083225 0.2090949 0.0762787 0.0379400 0.0435222 0.0986346 0.0029560 0.0318871 0.03831215 0.05796641 0.0712941 0.0108153 0.0614458 0.0141243 0.0023540 0.0946328 0.2648305 4 0.1046138 0.0978947 0.00848070 19 0.273126 0.204725 0.06840066 0.5055467 9.9998e-01 insignificant 1.00000 1.000000 insignificant 0.691607 9.9994e-01 insignificant 1 1.000000 insignificant 0.0083407 0.75299831 insignificant 1.00000 insignificant 0.1041233 0.0649874 0.05030687 19 0.245941 0.2071932 0.03874756 2.7233e-05 1.0000e+00 weaklyHypermeth 3.0258e-04 1.0000e+00 weaklyHypermeth 3.6064e-02 1.0000e+00 weaklyHypermeth 3.0592e-01 1.0000e+00 insignificant 0.02140398 6.4312e-01 insignificant 1.0000e+00 insignificant 0.1035020 0.0917073 0.02831695 17 0.221615 0.146023 0.0755925 6.8442e-04 9.9953e-01 weaklyHypermeth 1.9555e-02 1.0000e+00 weaklyHypermeth 2.5078e-02 9.9999e-01 weaklyHypermeth 6.6137e-01 1.00000000 insignificant 0.00159356 9.4964e-01 insignificant 1.0000e+00 insignificant 0.0975868 0.0637007 0.0404489 19 0.182029 0.1886431 -0.0066139 1.0788e-01 1.0000e+00 insignificant 6.0950e-01 1.0000e+00 insignificant 2.5599e-01 1.0000e+00 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0130632 7.7826e-01 insignificant 1.0000e+00 insignificant 0.097226 0.0921502 0.01701083 17 0.1875453 0.171901 0.01564450 3.7405e-01 9.9626e-01 insignificant 1.0000e+00 1.00000000 insignificant 4.2245e-01 9.9995e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.00674717 7.9632e-01 insignificant 1.00000000 insignificant 0.0618348 0.0923457 -0.02438614 17 0.1137955 0.154369 -4.0573e-02 9.9966e-01 7.5031e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9996e-01 9.6057e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0198104 6.6593e-01 insignificant 1.0000e+00 insignificant chr17 40598450 40599450 50578 HEXIM2 ENSG00000168517 0.7963536 120 5 0.6339683 82 5 0.6222222 49 5 0.8522833 90 5 0.5766667 18 1 0.7972362 144 5 0.6339286 40 2 0.7447033 100 5 0.72666667 33 5 0.661508 38 5 0.8020484 161 5 0.6000000 20 0 0.8777289 89 5 0.9600000 15 1 0.6851981 60 5 0.9000000 14 0 0.788095 23 2 0.7593900 94 5 0.8570370 87 5 0.8749505 114 5 0.875556 35 4 0.9500000 36 5 0.7361905 67 5 0.9166667 27 2 0.8714286 30 3 0.7771515 62 4 0.8669118 50 4 0.5000000 14 1 0.7877493 92 5 0.8523810 62 5 0.6820000 63 3 0.866442 120 5 0.7043434 71 5 0.80104978 72 5 0.6617965 80 5 0.7466667 20 3 0.6299561 51 5 0.7344444 66 5 0.8524606 80 5 0.8227451 91 5 0.8538462 69 5 0.8771429 41 5 0.8660670 107 5 0.7902702 0.6379731 0.6117216 0.8566921 0.5677656 0.7945385 0.6406332 0.74062754 0.7161172 0.6490930 0.8049989 0.5741758 0.8813348 0.95604396 0.6871846 0.89010989 0.79552590 0.7566377 0.86039886 0.8761370 0.8730159 0.9450549 0.7394035 0.9084249 0.8665620 0.7774226 0.8702327 0.5370371 0.7878902 0.8490319 0.6778022 0.8663153 0.7025197 0.8023048 0.65582037 0.75457875 0.6180837 0.7338217 0.8508893 0.8229189 0.8531276 0.8759812 0.8625171 0 0.7778577 0.8085106 -0.02654820 5 0.774448 0.813804 -0.03935584 0.9130383 2.9112e-02 weaklyHypometh 1.00000 0.977643 insignificant 0.980266 9.1370e-03 weaklyHypometh 1 0.662847 insignificant -0.0493738 0.26791845 lowCoverage 1.00000 lowCoverage 0.7778577 0.7277778 0.05307583 5 0.774448 0.7105752 0.06387273 2.1751e-02 9.8901e-01 weaklyHypermeth 1.3943e-01 1.0000e+00 insignificant 3.4645e-02 8.6848e-01 weaklyHypermeth 2.9866e-01 1.0000e+00 insignificant 0.04445642 2.2757e-01 lowCoverage 1.0000e+00 lowCoverage 0.7778577 0.8556701 -0.07939849 5 0.774448 0.851804 -0.0773559 9.9954e-01 4.1655e-03 weaklyHypometh 1.0000e+00 1.7940e-01 insignificant 9.9989e-01 3.5937e-03 weaklyHypometh 1.0000e+00 0.22863152 insignificant -0.09695309 1.3666e-03 lowCoverage 1.0240e-01 lowCoverage 0.8085106 0.7277778 0.0781536 5 0.813804 0.7105752 0.1032286 5.5019e-04 9.9537e-01 weaklyHypermeth 5.3417e-03 1.0000e+00 weaklyHypermeth 5.7815e-04 9.9137e-01 weaklyHypermeth 9.0336e-03 1.0000e+00 weaklyHypermeth 0.0938302 4.6674e-02 lowCoverage 4.7938e-01 lowCoverage 0.808511 0.8556701 -0.05440755 5 0.8138037 0.851804 -0.03800006 7.7306e-01 6.9408e-02 insignificant 1.0000e+00 1.00000000 insignificant 6.9938e-01 6.8090e-02 insignificant 1.0000e+00 1.0000000 insignificant -0.04757927 2.1832e-01 lowCoverage 1.00000000 lowCoverage 0.7277778 0.8556701 -0.13362546 5 0.7105752 0.851804 -1.4123e-01 1.0000e+00 7.1046e-05 weaklyHypometh 1.0000e+00 1.1277e-03 weaklyHypometh 9.9999e-01 5.7025e-04 weaklyHypometh 1.0000e+00 1.2092e-02 weaklyHypometh -0.1414095 1.6121e-03 lowCoverage 5.2004e-02 lowCoverage chr17 40804950 40805950 50591 ENSG00000199953 0.0159990 957 15 0.0306418 643 15 0.0088208 734 15 0.0141105 666 15 0.0091651 308 16 0.0646257 1313 15 0.0087995 724 15 0.0157611 545 15 0.00838508 724 15 0.068091 670 15 0.0124028 503 16 0.0195889 629 15 0.0055088 617 15 NA 0 0 0.0215490 666 15 0.0158287 565 16 0.014755 1235 15 0.1215920 807 15 0.0045732 694 15 0.0218034 1217 15 0.030134 170 15 0.0039216 353 15 0.0178304 804 15 0.0190514 261 15 0.0229660 301 15 0.0076463 768 15 0.0402321 283 14 0.0313502 137 13 0.0145891 459 15 0.1368964 841 15 0.0076493 1174 15 0.076351 929 15 0.0012255 554 15 0.00289855 454 15 0.0000000 342 9 0.0000000 352 15 0.0707071 98 9 0.0000000 646 15 0.0110071 1140 15 0.0254386 1023 15 0.0087078 887 15 0.0094765 1059 15 0.0319104 1133 15 0.0194241 0.0143228 0.0130475 0.0126558 0.0095886 0.0487730 0.0100385 0.01804633 0.0076090 0.0090758 0.0173332 0.0259696 0.0051695 NA 0.0193299 0.01696411 0.01617444 0.0139389 0.00467967 0.0223059 0.0479999 0.0034350 0.0221837 0.0229127 0.0235978 0.0105087 0.0098147 0.0367804 0.0229240 0.0102052 0.0082426 0.0184862 0.0018606 0.0025389 0.00369291 0.00000000 0.0159257 0.0000000 0.0098276 0.0077352 0.0066380 0.0095686 0.0310554 15 0.0182880 0.0158951 0.00281038 15 0.039022 0.044750 -0.00572784 0.1182346 9.4313e-01 insignificant 1.00000 1.000000 insignificant 0.044923 9.2532e-01 weaklyHypermeth 1 1.000000 insignificant -0.0086830 0.50569619 insignificant 1.00000 insignificant 0.0182880 0.0024530 0.01591552 15 0.039022 0.0300387 0.00898357 9.5571e-09 1.0000e+00 weaklyHypermeth 1.6478e-07 1.0000e+00 weaklyHypermeth 2.7580e-08 1.0000e+00 weaklyHypermeth 8.6189e-07 1.0000e+00 weaklyHypermeth 0.01289659 3.6356e-01 insignificant 1.0000e+00 insignificant 0.0182880 0.0137352 0.00463189 15 0.039022 0.029827 0.0091957 7.5763e-02 3.4687e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.0748e-01 4.3827e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.00806038 3.3894e-01 insignificant 1.0000e+00 insignificant 0.0158951 0.0024530 0.0132071 15 0.044750 0.0300387 0.0147114 1.9530e-05 1.0000e+00 weaklyHypermeth 2.4524e-04 1.0000e+00 weaklyHypermeth 4.7776e-05 1.0000e+00 weaklyHypermeth 9.7502e-04 1.0000e+00 weaklyHypermeth 0.0215795 1.9951e-01 insignificant 1.0000e+00 insignificant 0.015895 0.0137352 0.00197522 15 0.0447501 0.029827 0.01492359 2.8836e-01 3.1484e-01 insignificant 1.0000e+00 1.00000000 insignificant 5.2243e-01 1.1336e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.01674333 1.8124e-01 insignificant 1.00000000 insignificant 0.0024530 0.0137352 -0.01088471 15 0.0300387 0.029827 2.1218e-04 1.0000e+00 2.4861e-05 weaklyHypometh 1.0000e+00 4.3615e-04 weaklyHypometh 1.0000e+00 3.6841e-05 weaklyHypometh 1.0000e+00 1.2704e-03 weaklyHypometh -0.0048362 7.1306e-01 insignificant 1.0000e+00 insignificant chr17 41659350 41660350 50613 ENSG00000207064 0.6181793 147 7 0.6332837 155 7 0.6272894 56 5 0.6925080 187 7 0.7693182 77 4 0.6745030 141 5 0.6362090 95 4 0.5825484 77 7 0.69047619 57 7 0.416667 32 4 0.6391940 185 7 0.3571429 28 4 0.7115079 58 7 0.5529762 34 4 0.6509895 66 7 0.4083333 36 4 0.570090 350 4 0.6202758 179 9 0.7022676 58 7 0.7586767 129 5 0.541667 35 2 1.0000000 4 0 0.5804159 83 7 0.6823810 59 7 0.6815934 46 6 0.7277443 145 7 0.7511305 74 5 0.4500000 16 0 0.6964286 40 4 0.5890278 120 7 0.6973810 144 7 0.632692 95 5 0.6038925 105 7 0.54727891 77 6 0.5141013 173 7 0.6137566 36 4 0.6662698 73 7 0.5297494 134 7 0.6186174 178 7 0.6607874 203 7 0.6373250 151 7 0.7098320 104 7 0.6667042 181 5 0.6057324 0.5537788 0.5222014 0.6600976 0.6737805 0.6052019 0.6171471 0.50963027 0.6246612 0.6111111 0.6315304 0.4025336 0.6261292 0.56693767 0.6207722 0.50812467 0.60911228 0.6855859 0.66013357 0.6312546 0.4882565 0.6740535 0.6508777 0.7639566 0.6147592 0.6903438 0.6869814 0.5772358 0.6310976 0.5765583 0.7140921 0.5867417 0.5044089 0.4562331 0.48769336 0.60465608 0.5629242 0.5371233 0.6258936 0.6696967 0.5714975 0.6426010 0.6204810 3 0.6697718 0.7270616 -0.01864717 7 0.625513 0.572850 0.05266331 0.5500589 5.9721e-01 insignificant 1.00000 1.000000 insignificant 0.927829 6.2400e-01 insignificant 1 1.000000 insignificant -0.0535833 0.26091721 lowCoverage 1.00000 lowCoverage 0.6710713 0.6153846 0.09482667 7 0.615599 0.5111073 0.10449131 3.7629e-04 5.7835e-01 weaklyHypermeth 3.5168e-03 1.0000e+00 weaklyHypermeth 5.1934e-04 7.2961e-01 weaklyHypermeth 7.9899e-03 1.0000e+00 weaklyHypermeth 0.03644701 3.0542e-01 insignificant 1.0000e+00 insignificant 0.6701372 0.7246022 -0.02282232 7 0.577158 0.665106 -0.0879472 8.8391e-01 4.6798e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.9212e-01 5.2852e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.04303143 1.5580e-01 insignificant 1.0000e+00 insignificant 0.7297297 0.6153846 0.1104061 7 0.629644 0.5111073 0.1185363 3.8378e-06 9.9909e-01 weaklyHypermeth 5.5620e-05 1.0000e+00 weaklyHypermeth 1.8658e-03 9.7263e-01 weaklyHypermeth 2.3322e-02 1.0000e+00 weaklyHypermeth 0.0900303 6.6928e-02 lowCoverage 6.1402e-01 lowCoverage 0.730178 0.7246022 0.00536616 7 0.6259413 0.665106 -0.03916436 7.6024e-01 7.7322e-01 insignificant 1.0000e+00 1.00000000 insignificant 5.2204e-01 8.9807e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.01055191 8.0529e-01 lowCoverage 1.00000000 lowCoverage 0.6164154 0.7246022 -0.10747858 7 0.5622181 0.665106 -1.0289e-01 9.9724e-01 6.3313e-05 weaklyHypometh 1.0000e+00 1.0212e-03 weaklyHypometh 9.9061e-01 2.0927e-02 weaklyHypometh 1.0000e+00 2.2502e-01 insignificant -0.0794784 2.2595e-02 weaklyHypometh 3.1424e-01 insignificant chr17 41677050 41678050 50614 ENSG00000177050 0.9447581 1317 16 0.8331335 892 20 0.7944807 914 17 0.9275676 1311 18 0.7784640 299 14 0.8307058 1515 20 0.7881128 521 15 0.8492079 742 18 0.81937522 1100 16 0.893452 967 18 0.8954957 1532 20 0.7278548 357 16 0.8634672 950 17 0.8581373 681 15 0.8690465 693 19 0.7588005 259 13 0.688524 363 9 0.8087770 1859 18 0.8300230 1796 19 0.9222081 1574 20 0.792954 228 16 0.8362491 404 16 0.8912342 533 16 0.8910288 402 16 0.8721429 377 17 0.9416317 1354 18 0.8570019 755 18 0.7484503 434 15 0.8729551 1050 18 0.8510302 1059 18 0.8979032 1578 18 0.858873 1168 16 0.9005418 553 18 0.85798336 506 18 0.9431358 787 16 0.8352273 97 6 0.8166155 604 18 0.8288644 1262 19 0.8412850 1281 16 0.9187968 902 20 0.9573475 1200 19 0.8752149 1172 15 0.9266516 1529 18 0.9375995 0.8708612 0.9070203 0.9356114 0.8944422 0.8615894 0.9062228 0.91888618 0.9266682 0.9383743 0.9290456 0.8749566 0.9492791 0.91429722 0.9354689 0.88699848 0.91071128 0.9369771 0.92331063 0.9364610 0.9154037 0.9084506 0.9340774 0.9262075 0.9474579 0.9428969 0.8819348 0.9184937 0.9337358 0.9358062 0.9393667 0.9278155 0.8944939 0.8836329 0.93437074 0.95931655 0.9267784 0.9140422 0.9495817 0.9480981 0.9599861 0.9319171 0.9444968 12 0.9207618 0.9248153 -0.00671227 18 0.778557 0.813729 -0.03517223 0.8422476 2.7954e-02 weaklyHypometh 1.00000 0.977643 insignificant 0.979985 1.3826e-01 insignificant 1 1.000000 insignificant -0.0252083 0.23665708 insignificant 1.00000 insignificant 0.9207109 0.9074901 0.00921378 18 0.738557 0.7299390 0.00861800 4.2361e-02 8.0755e-02 weaklyHypermeth 2.6149e-01 1.0000e+00 insignificant 9.9830e-01 1.1095e-02 inconclusive 1.0000e+00 7.9248e-01 insignificant -0.02964846 2.5868e-01 insignificant 1.0000e+00 insignificant 0.9208047 0.9342430 -0.01813440 18 0.802779 0.857366 -0.0545866 9.9434e-01 7.5274e-04 weaklyHypometh 1.0000e+00 4.4279e-02 weaklyHypometh 9.9983e-01 1.7568e-05 weaklyHypometh 1.0000e+00 0.00585590 weaklyHypometh -0.06977959 2.2430e-02 weaklyHypometh 5.2162e-01 insignificant 0.9249224 0.9075630 0.0165776 18 0.833729 0.7599390 0.0737902 2.6214e-02 4.3594e-01 weaklyHypermeth 1.6912e-01 1.0000e+00 insignificant 9.3972e-01 1.3792e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0044402 8.6075e-01 insignificant 1.0000e+00 insignificant 0.924882 0.9342538 -0.00972513 18 0.8268013 0.863309 -0.03650771 2.7329e-01 5.7724e-02 insignificant 1.0000e+00 1.00000000 insignificant 9.6322e-01 1.0246e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.04457127 1.1194e-01 insignificant 1.00000000 insignificant 0.9080158 0.9342538 -0.02543949 18 0.7777142 0.863309 -8.5595e-02 4.9076e-01 5.7253e-02 insignificant 1.0000e+00 3.7178e-01 insignificant 6.1799e-01 7.2950e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0401311 1.9397e-01 insignificant 1.0000e+00 insignificant chr17 42227250 42228250 50625 ENSG00000213326 0.9337209 398 8 0.7840983 434 10 0.5951441 280 8 0.9057881 310 9 0.8139758 147 8 0.8755084 704 10 0.7634344 243 7 0.8755561 360 10 0.82099567 235 8 0.819847 205 7 0.8755890 488 10 0.5750891 135 5 0.8564094 340 7 0.9348485 65 3 0.9296021 247 8 0.9256410 94 5 0.799075 229 5 0.8002659 404 9 0.8430908 704 10 0.8762607 536 10 0.903131 170 10 0.8724541 102 4 0.8225491 233 7 0.8617708 179 10 0.9069037 69 5 0.9021732 537 10 0.6251158 176 7 0.9012388 97 5 0.8298163 467 10 0.8959276 592 10 0.8421290 852 10 0.875565 495 10 0.5954150 377 10 0.47835312 363 10 0.6770725 344 6 0.7231092 67 4 0.5354460 204 10 0.6458508 557 10 0.8570105 248 7 0.7435368 372 10 0.8550818 250 7 0.6771022 241 6 0.7432814 344 10 0.9221479 0.8566290 0.6626749 0.9068737 0.8715660 0.8718338 0.8685678 0.85600918 0.8803125 0.8600250 0.8832811 0.7681566 0.7841191 0.87023148 0.8880406 0.93119891 0.77491486 0.8037894 0.85949516 0.8813394 0.8591198 0.7863438 0.8999855 0.8799912 0.8270860 0.8903988 0.8009901 0.8379463 0.8587752 0.8541647 0.8666426 0.9254576 0.6451947 0.3117345 0.48461936 0.54723885 0.5722391 0.4723619 0.8999968 0.8184152 0.8229507 0.6697417 0.7735619 4 0.8452036 0.8651714 -0.01549494 10 0.816003 0.872119 -0.05611580 0.9725736 1.8183e-01 insignificant 1.00000 1.000000 insignificant 0.924440 2.8847e-01 insignificant 1 1.000000 insignificant -0.0230342 0.47026381 insignificant 1.00000 insignificant 0.8453089 0.5557300 0.31204214 10 0.847603 0.5656906 0.28191253 8.3133e-33 1.0000e+00 hypermethylated 5.5422e-31 1.0000e+00 hypermethylated 3.3119e-12 9.9997e-01 hypermethylated 2.3293e-10 1.0000e+00 hypermethylated 0.22098924 6.8248e-04 hypermethylated 1.6538e-02 hypermethylated 0.8453089 0.7955953 0.04884724 10 0.847603 0.787548 0.0600547 2.1575e-04 9.6986e-01 weaklyHypermeth 8.6299e-03 1.0000e+00 weaklyHypermeth 2.2147e-02 9.6667e-01 weaklyHypermeth 6.1520e-01 1.00000000 insignificant 0.05499448 2.2394e-01 insignificant 1.0000e+00 insignificant 0.8651374 0.5557300 0.3054997 10 0.859331 0.5656906 0.2936399 3.6883e-25 1.0000e+00 hypermethylated 2.1696e-23 1.0000e+00 hypermethylated 2.3917e-10 9.9998e-01 hypermethylated 1.7084e-08 1.0000e+00 hypermethylated 0.2440234 3.6460e-04 hypermethylated 9.3488e-03 hypermethylated 0.865171 0.7957359 0.06457957 10 0.8721187 0.806862 0.06525646 6.4763e-04 9.9961e-01 weaklyHypermeth 2.0238e-02 1.00000000 weaklyHypermeth 4.3531e-02 9.9715e-01 weaklyHypermeth 1.0000e+00 1.0000000 insignificant 0.07802866 1.0089e-01 insignificant 1.00000000 insignificant 0.5559623 0.7950481 -0.27216766 10 0.6051733 0.715953 -1.1078e-01 1.0000e+00 2.2163e-07 hypomethylated 1.0000e+00 5.0371e-06 hypomethylated 9.9997e-01 6.9883e-05 hypomethylated 1.0000e+00 2.2543e-03 hypomethylated -0.1659948 1.0199e-02 weaklyHypometh 1.8887e-01 insignificant chr17 42530150 42531150 50634 ENSG00000187451 0.8061215 303 8 0.8637667 206 8 0.8144139 202 5 0.7293937 193 7 0.8163022 164 8 0.8207107 142 8 0.7590849 140 8 0.8455027 161 8 0.70429779 116 5 0.724563 122 8 0.8961335 198 8 0.8131069 103 7 0.6617588 181 8 0.8277778 59 4 0.7368659 157 8 0.8550000 55 5 0.850248 75 4 0.7910151 263 6 0.7182864 203 5 0.6840290 300 8 0.648591 62 4 0.8736111 48 4 0.7899669 215 8 0.6548461 80 8 0.8229029 95 7 0.8623081 285 8 0.7514449 76 8 0.5500000 42 5 0.8380333 235 8 0.8141445 261 8 0.8368239 329 8 0.831507 271 8 0.8535637 197 8 0.83762077 113 7 0.7375980 186 8 0.8916667 44 4 0.5701583 114 9 0.8454524 251 8 0.6228241 296 8 0.8028238 248 8 0.7160704 242 8 0.8457576 279 7 0.7370845 335 8 0.8691435 0.8619411 0.7998618 0.8787147 0.8965234 0.7587885 0.8586458 0.87611638 0.8196579 0.9535927 0.9003935 0.8669591 0.9452002 0.86027083 0.8992200 0.78850000 0.85724511 0.9096151 0.85477010 0.8532587 0.7650858 0.8821111 0.9027588 0.8619535 0.9136056 0.9203149 0.8501886 0.7370238 0.8685043 0.9313790 0.8963312 0.9031207 0.8107775 0.9008092 0.64581159 0.87009509 0.7892477 0.9082433 0.8953919 0.9168698 0.9369443 0.9363333 0.8769316 3 0.8542729 0.8764382 -0.00909744 8 0.700784 0.696454 0.00433032 0.2051389 4.0847e-01 insignificant 1.00000 1.000000 insignificant 0.243993 7.7840e-01 insignificant 1 1.000000 insignificant 0.0130707 0.69629877 insignificant 1.00000 insignificant 0.8534251 0.8110497 0.03314903 8 0.686442 0.6696376 0.01680456 3.5652e-01 9.6723e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.2191e-01 9.5958e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00342438 9.4845e-01 insignificant 1.0000e+00 insignificant 0.8550812 0.8771429 -0.02954320 8 0.712886 0.705800 0.0070861 6.6242e-01 1.2576e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.5824e-01 1.9462e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.04100685 3.6163e-01 insignificant 1.0000e+00 insignificant 0.8764382 0.8108407 0.0361820 8 0.696454 0.6442251 0.0522284 6.5379e-01 8.9205e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.2587e-01 8.9789e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0164951 7.7813e-01 insignificant 1.0000e+00 insignificant 0.877694 0.8771429 -0.02306437 8 0.7336580 0.705800 0.02785787 9.0910e-01 2.9658e-01 insignificant 1.0000e+00 1.00000000 insignificant 9.9193e-01 3.2209e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.02793616 5.7694e-01 insignificant 1.00000000 insignificant 0.8124306 0.8771429 -0.07964058 8 0.6701328 0.705800 -3.5667e-02 8.8169e-01 2.6816e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.8405e-01 2.2495e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0444312 4.9105e-01 insignificant 1.0000e+00 insignificant chr17 43176950 43177950 50666 TBX21 ENSG00000073861 0.8684128 179 8 0.8060847 224 8 0.7375315 150 8 0.7169937 129 6 0.8929716 111 7 0.7357939 460 8 0.5647096 78 8 0.8808449 190 8 0.71393340 98 8 0.847443 106 8 0.7858477 291 8 0.8184524 36 3 0.8710956 194 8 0.7583333 36 3 0.8679696 148 8 0.8636364 40 3 0.587013 49 4 0.8060027 152 6 0.8626087 418 8 0.8022306 365 8 0.780035 136 7 0.8247450 72 3 0.8567032 165 8 0.7976526 93 8 0.8400794 52 4 0.8893346 291 8 0.7667791 127 8 0.7301587 41 3 0.8379650 203 8 0.9138840 285 8 0.9032775 394 8 0.835997 267 8 0.3511056 210 8 0.40699962 223 8 0.8844884 123 3 0.5000000 43 4 0.5834453 137 7 0.4722621 303 8 0.7751431 194 8 0.7035195 230 8 0.7454211 145 6 0.7855484 139 6 0.7726084 168 6 0.8572973 0.7763328 0.7338512 0.7397307 0.8741531 0.8166794 0.5477204 0.87983371 0.7387799 0.8284521 0.7775146 0.8555985 0.8437664 0.77501767 0.8556411 0.79443230 0.64519997 0.7855781 0.85029562 0.7937547 0.8187666 0.8067270 0.8557207 0.7541354 0.8545425 0.8596514 0.7614773 0.8426641 0.8438099 0.8981472 0.8700567 0.8534212 0.2882394 0.3053098 0.41400127 0.42093373 0.5120231 0.3867287 0.7184449 0.6998961 0.6865880 0.7244974 0.7030130 3 0.8164447 0.8621825 -0.04762561 8 0.721396 0.821866 -0.10047022 0.9999659 1.8050e-03 weaklyHypometh 1.00000 0.200556 insignificant 0.999593 1.1001e-02 weaklyHypometh 1 0.687532 insignificant -0.0419888 0.12015222 insignificant 1.00000 insignificant 0.8166811 0.5004812 0.34446656 8 0.811571 0.4490600 0.36251060 4.7901e-35 1.0000e+00 hypermethylated 3.6847e-33 1.0000e+00 hypermethylated 1.3846e-07 9.9998e-01 hypermethylated 3.7422e-06 1.0000e+00 hypermethylated 0.25634528 1.9847e-02 weaklyHypermeth 2.6114e-01 insignificant 0.8166811 0.7111872 0.07278079 7 0.811571 0.759463 0.0521071 3.6176e-04 8.0900e-01 weaklyHypermeth 1.1670e-02 1.0000e+00 weaklyHypermeth 2.5132e-02 6.0947e-01 weaklyHypermeth 6.6137e-01 1.00000000 insignificant 0.03294733 2.1070e-01 insignificant 1.0000e+00 insignificant 0.8625235 0.5004812 0.3858956 8 0.862100 0.4490600 0.4130396 3.9447e-31 1.0000e+00 hypermethylated 3.5861e-29 1.0000e+00 hypermethylated 2.3411e-08 1.0000e+00 hypermethylated 8.6708e-07 1.0000e+00 hypermethylated 0.2983340 1.1116e-02 weaklyHypermeth 1.6592e-01 insignificant 0.862524 0.7111872 0.12046402 7 0.8620996 0.759463 0.10263610 5.7392e-07 9.9521e-01 weaklyHypermeth 3.3760e-05 1.00000000 weaklyHypermeth 1.1063e-03 9.0773e-01 weaklyHypermeth 5.8226e-02 1.0000000 weaklyHypermeth 0.07493610 4.7025e-03 weaklyHypermeth 0.39187212 insignificant 0.5004812 0.7111872 -0.31661240 7 0.4490600 0.759463 -3.1040e-01 1.0000e+00 6.2695e-12 hypomethylated 1.0000e+00 3.1348e-10 hypomethylated 9.9998e-01 1.1550e-04 hypomethylated 1.0000e+00 3.3140e-03 hypomethylated -0.2233979 3.3731e-02 weaklyHypometh 3.9747e-01 insignificant chr17 43282850 43283850 50670 SCRN2 ENSG00000141295 0.0598665 1947 42 0.0344096 2102 42 0.0820092 2505 44 0.0717940 1522 39 0.0436737 1943 42 0.1113594 3508 41 0.0658651 2657 43 0.0717152 1930 43 0.09657972 2014 44 0.042520 2341 41 0.0570218 2272 43 0.0387915 1909 41 0.0449825 1954 42 0.0220247 842 23 0.0175054 2255 41 0.0700508 2192 41 0.042756 1708 24 0.0810703 2681 36 0.0269267 3036 41 0.0342417 3200 41 0.120701 913 41 0.0564342 779 31 0.0659056 1381 44 0.0759473 1078 45 0.0924664 1705 28 0.0332268 2611 45 0.0578392 1507 37 0.0192467 1004 50 0.0922201 1806 41 0.0527330 2624 45 0.0323347 3963 45 0.048292 2183 41 0.0514563 1608 45 0.08556289 1711 41 0.1843634 1394 27 0.0605334 782 28 0.1247333 1057 48 0.1091883 2218 44 0.0692444 2050 41 0.0582870 2033 41 0.0616526 1429 38 0.0362775 1995 38 0.0676698 1362 36 0.0218076 0.0116705 0.0250967 0.0275043 0.0216652 0.0399200 0.0238020 0.02025096 0.0222128 0.0294679 0.0326727 0.0258172 0.0124341 0.02206465 0.0193875 0.02358177 0.02891133 0.0291513 0.01493207 0.0169518 0.0285843 0.0136223 0.0447372 0.0143749 0.0209796 0.0190451 0.0103868 0.0074095 0.0226877 0.0111092 0.0158111 0.0298052 0.0483458 0.0674792 0.06193072 0.04931327 0.1053974 0.0291830 0.0208614 0.0247387 0.0185590 0.0164463 0.0198001 30 0.0206695 0.0215757 0.00409360 43 0.122932 0.096708 0.02622398 0.1387670 9.6830e-01 insignificant 1.00000 1.000000 insignificant 0.109999 9.9094e-01 insignificant 1 1.000000 insignificant -0.0065207 0.52736403 insignificant 1.00000 insignificant 0.0206063 0.0522235 -0.02896881 43 0.108170 0.1029906 0.00517971 9.8672e-01 2.7119e-11 weaklyHypometh 1.0000e+00 3.3899e-09 weaklyHypometh 9.9863e-01 4.8988e-05 weaklyHypometh 1.0000e+00 6.9983e-03 weaklyHypometh -0.04688142 6.5397e-02 insignificant 6.9326e-01 insignificant 0.0204435 0.0151088 0.00166442 38 0.099712 0.071990 0.0277228 3.8013e-02 8.9763e-01 weaklyHypermeth 6.9115e-01 1.0000e+00 insignificant 1.1971e-01 9.9988e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.00286808 7.3227e-01 insignificant 1.0000e+00 insignificant 0.0214070 0.0522771 -0.0323697 44 0.077129 0.1126460 -0.0355172 9.9979e-01 2.0171e-07 weaklyHypometh 1.0000e+00 2.5214e-05 weaklyHypometh 9.9998e-01 8.8988e-05 weaklyHypometh 1.0000e+00 1.4831e-02 weaklyHypometh -0.0403607 1.0507e-01 insignificant 8.2363e-01 insignificant 0.021299 0.0151088 -0.00153012 39 0.0933952 0.071990 0.02140556 6.2617e-01 9.3589e-01 insignificant 1.0000e+00 1.00000000 insignificant 8.3562e-01 9.8908e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.00365265 7.2783e-01 insignificant 1.00000000 insignificant 0.0520953 0.0149994 0.02883691 39 0.1211190 0.056972 6.4147e-02 2.1805e-02 1.0000e+00 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 4.7710e-02 1.0000e+00 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.0440133 7.9479e-02 insignificant 6.9718e-01 insignificant chr17 43444950 43445950 50680 CDK5RAP3 ENSG00000108465 0.8026598 63 3 0.8411932 152 6 0.6472337 141 5 0.7349330 71 3 0.6357476 98 4 0.7176450 123 5 0.8615733 138 4 0.8901852 141 5 0.78536589 86 4 0.764957 86 4 0.8859397 197 6 0.8122004 57 3 0.8487323 117 4 0.6764706 20 1 0.6870861 96 4 0.8244048 31 3 0.850918 65 3 0.6946429 71 5 0.8253974 206 4 0.8955556 60 4 0.553606 62 4 0.8000000 9 1 0.6526042 56 4 0.6423433 59 4 0.6404762 36 2 0.9053126 157 5 0.8383577 76 5 0.5030220 40 4 0.7256015 106 4 0.8672516 186 5 0.6897301 233 5 0.620511 90 5 0.4776699 158 6 0.65673804 137 5 0.5599252 142 5 0.6666667 10 1 0.4916667 76 5 0.8028991 123 5 0.3564103 59 3 0.6593567 66 4 0.7190217 56 2 0.5148810 29 1 0.8056166 64 3 0.8122497 0.6521307 0.6912272 0.7049851 0.7533108 0.8067199 0.6862841 0.77316744 0.8204785 0.7847222 0.7455638 0.7186819 0.7968061 0.81559558 0.6311693 0.91393849 0.68668595 0.6958333 0.68419161 0.7972222 0.5105994 0.5304170 0.6939236 0.4356704 0.6109725 0.7617312 0.6883555 0.8302484 0.7285521 0.7981708 0.7482353 0.6393438 0.4769215 0.4354873 0.33433601 0.40506142 0.6428571 0.4464393 0.3944979 0.6082481 0.5449049 0.6709491 0.6588141 1 0.8301139 0.8088368 0.01613090 4 0.607996 0.574275 0.03372053 0.4238679 8.9694e-01 lowCoverage 1.00000 1.000000 lowCoverage 0.252909 9.8122e-01 lowCoverage 1 1.000000 lowCoverage 0.0809074 0.06504833 lowCoverage 1.00000 lowCoverage 0.8305253 0.6847826 0.13785714 4 0.668795 0.4985611 0.17023409 8.3433e-07 9.9765e-01 lowCoverage 1.1751e-05 1.0000e+00 lowCoverage 1.1164e-02 9.8052e-01 lowCoverage 1.1392e-01 1.0000e+00 lowCoverage 0.17488118 1.5924e-02 lowCoverage 2.1813e-01 lowCoverage 0.8305253 0.5257353 0.16281249 2 0.668795 0.527666 0.1411293 4.5930e-05 8.9790e-01 lowCoverage 2.4173e-03 1.0000e+00 lowCoverage 1.1237e-02 8.4392e-01 lowCoverage 4.0133e-01 1.00000000 lowCoverage 0.17308485 9.3955e-02 lowCoverage 1.0000e+00 lowCoverage 0.8123300 0.6852713 0.1225304 5 0.561288 0.5441464 0.0171416 4.7879e-03 9.8237e-01 weaklyHypermeth 3.7700e-02 1.0000e+00 weaklyHypermeth 3.1094e-01 8.1843e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0939737 1.6165e-01 lowCoverage 1.0000e+00 lowCoverage 0.812330 0.5274725 0.11089179 2 0.5612880 0.570605 -0.00931731 7.2581e-02 7.7683e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 5.3738e-01 7.4339e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 0.09217741 3.3335e-01 lowCoverage 1.00000000 lowCoverage 0.6842105 0.5255474 -0.14678118 2 0.4988009 0.523055 -2.4254e-02 8.0795e-01 2.4315e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.5195e-01 4.4532e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0017963 9.8530e-01 lowCoverage 1.0000e+00 lowCoverage chr17 43921450 43922450 50696 ENSG00000206805 0.6566441 400 9 0.5469748 278 10 0.5137793 258 9 0.5275176 244 10 0.3693651 176 9 0.5430375 527 9 0.4577484 148 9 0.5611475 191 6 0.58727718 138 9 0.548654 124 7 0.6870747 403 10 0.5489899 111 8 0.6915128 196 9 0.3884712 92 5 0.4251105 201 9 0.6256864 110 9 0.377564 55 4 0.6759684 293 9 0.7308256 281 9 0.4325949 435 9 0.782761 97 6 0.5320443 103 9 0.5186888 208 9 0.4575685 231 9 0.5540430 127 9 0.5620499 351 10 0.5692549 242 9 0.6724928 108 6 0.5198937 152 9 0.4714635 289 10 0.5658767 411 10 0.703079 311 9 0.6455196 167 9 0.69373131 141 9 0.7757754 234 9 0.7534392 35 5 0.6953280 165 9 0.8064076 239 10 0.5205137 256 10 0.4974941 316 9 0.4078668 252 10 0.6269405 240 8 0.6232812 346 10 0.6128059 0.5697949 0.5888321 0.4971677 0.3537503 0.4128662 0.4545474 0.63254734 0.6072590 0.5782096 0.6408472 0.6266159 0.7130615 0.42340165 0.3781634 0.67843355 0.46113990 0.6451439 0.75626285 0.4018816 0.7577085 0.5744607 0.5339602 0.4534591 0.6120183 0.6205904 0.6156670 0.6396610 0.5984531 0.4712289 0.6103627 0.7483573 0.7445482 0.7962177 0.78630070 0.86739304 0.7285718 0.8891763 0.4506743 0.4771115 0.3648294 0.5886634 0.6441268 7 0.5586784 0.5939163 -0.05085969 9 0.510453 0.676624 -0.16617176 0.9441295 6.9216e-02 insignificant 1.00000 1.000000 insignificant 0.997035 1.8567e-01 insignificant 1 1.000000 insignificant -0.0309708 0.41378404 insignificant 1.00000 insignificant 0.5589435 0.7991845 -0.24999132 9 0.567750 0.7074119 -0.13966169 7.7817e-01 1.2146e-15 hypomethylated 1.0000e+00 2.4292e-13 hypomethylated 9.7822e-01 3.1925e-10 hypomethylated 1.0000e+00 1.5963e-07 hypomethylated -0.18356966 7.8133e-05 weaklyHypometh 2.4416e-03 weaklyHypometh 0.5587793 0.6368794 -0.00497270 9 0.551182 0.563999 -0.0128172 1.0601e-01 5.4266e-02 insignificant 1.0000e+00 9.3562e-01 insignificant 8.0242e-02 4.6516e-02 weaklyHypometh 1.0000e+00 0.95122339 insignificant 0.00957793 8.4774e-01 insignificant 1.0000e+00 insignificant 0.5936073 0.7991845 -0.2075606 9 0.622728 0.7074119 -0.0846835 9.9735e-01 3.2903e-11 hypomethylated 1.0000e+00 6.5807e-09 hypomethylated 8.9948e-01 6.0070e-08 hypomethylated 1.0000e+00 2.0023e-05 hypomethylated -0.1525988 9.4085e-04 weaklyHypometh 2.1383e-02 weaklyHypometh 0.593453 0.6368794 0.05434443 10 0.5884310 0.563999 0.02443176 2.5567e-03 6.1762e-02 weaklyHypermeth 7.4172e-02 1.00000000 weaklyHypermeth 3.1079e-02 8.8574e-02 weaklyHypermeth 8.3997e-01 1.0000000 insignificant 0.04054876 4.3912e-01 insignificant 1.00000000 insignificant 0.8000000 0.6368794 0.26778872 9 0.7717221 0.563999 2.0772e-01 6.4710e-14 1.2367e-02 hypermethylated 1.6178e-11 1.0661e-01 hypermethylated 2.0549e-06 5.9472e-02 hypermethylated 4.1097e-04 4.8351e-01 hypermethylated 0.1931476 5.5691e-03 weaklyHypermeth 1.2461e-01 insignificant chr17 43987250 43988250 50703 HOXB2 ENSG00000173917 0.0124150 301 6 0.0564066 149 11 0.0366071 294 9 0.1748193 374 6 0.0209790 172 9 0.0617087 418 9 0.0359307 241 11 0.0442890 306 9 0.01256389 477 9 0.029315 485 9 0.0200110 237 11 0.0230325 467 9 0.1044372 414 9 0.0105323 405 9 0.0241933 342 9 0.0136409 333 9 0.012346 112 7 0.0343144 517 6 0.1135802 266 6 0.0227366 475 9 0.037704 97 9 0.0336183 193 9 0.0640207 216 11 0.1045455 125 9 0.0826840 214 10 0.0125378 368 9 0.0363095 201 9 0.0484091 185 9 0.1333913 147 6 0.0384865 245 11 0.0245310 381 11 0.060780 315 9 0.2481229 160 11 0.00000000 67 6 0.7888500 132 3 0.1202020 65 6 0.1827381 89 6 0.3356792 125 9 0.0227273 436 6 0.0694444 423 6 0.0015625 495 8 0.0037351 356 6 0.1869640 340 6 0.0198770 0.0078691 0.0062222 0.0301458 0.0032687 0.0697833 0.0072036 0.00217912 0.0082602 0.0131859 0.0026558 0.0270928 0.0035871 0.00624835 0.0089233 0.00532848 0.01825622 0.0130739 0.01756374 0.0117661 0.0403704 0.0296090 0.0156683 0.0021246 0.0108593 0.0096904 0.0111291 0.0102395 0.0704941 0.0193402 0.0014614 0.0121394 0.0841345 0.0116237 0.83962253 0.09971671 0.0499174 0.4118413 0.0035411 0.0000000 0.0098796 0.0055233 0.0376289 6 0.0191599 0.0275400 -0.00444061 9 0.039288 0.035993 0.00329537 0.8503913 7.3894e-01 insignificant 1.00000 1.000000 insignificant 0.879805 6.7281e-01 insignificant 1 1.000000 insignificant -0.0132252 0.34884580 insignificant 1.00000 insignificant 0.0191627 0.3479624 -0.29806272 9 0.042310 0.3263670 -0.28405663 1.0000e+00 1.2340e-26 hypomethylated 1.0000e+00 4.1133e-24 hypomethylated 1.0000e+00 3.7886e-09 hypomethylated 1.0000e+00 9.4716e-07 hypomethylated -0.23607243 8.8969e-02 insignificant 8.1623e-01 insignificant 0.0190322 0.0053659 0.00817469 6 0.031947 0.072173 -0.0402252 2.5755e-01 5.1410e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.3062e-01 9.7245e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.01369373 7.2053e-01 insignificant 1.0000e+00 insignificant 0.0275605 0.3479624 -0.2849756 9 0.038762 0.3263670 -0.2876055 1.0000e+00 9.5916e-15 hypomethylated 1.0000e+00 3.1972e-12 hypomethylated 1.0000e+00 6.4374e-07 hypomethylated 1.0000e+00 1.2875e-04 hypomethylated -0.2228472 1.0348e-01 insignificant 8.2363e-01 insignificant 0.027643 0.0053659 0.00681503 6 0.0419917 0.072173 -0.03018095 2.8349e-01 8.2136e-01 insignificant 1.0000e+00 1.00000000 insignificant 1.4259e-01 9.6869e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.00046851 9.9020e-01 insignificant 1.00000000 insignificant 0.3490566 0.0053659 0.21829245 6 0.3535643 0.072173 2.8139e-01 1.0788e-05 1.0000e+00 hypermethylated 1.7980e-03 1.0000e+00 hypermethylated 8.9109e-05 1.0000e+00 hypermethylated 1.4852e-02 1.0000e+00 hypermethylated 0.2223787 1.0724e-01 insignificant 8.7185e-01 insignificant chr17 44002450 44003450 50705 HOXB2 ENSG00000173917 0.0631724 637 13 0.0557009 418 13 0.0714403 522 13 0.0327232 481 13 0.0662524 365 13 0.1897278 1083 13 0.0639876 393 13 0.0440772 412 13 0.04084885 656 13 0.094757 581 13 0.0712277 495 13 0.0282284 429 13 0.0211237 607 13 0.0902802 229 9 0.0351216 526 13 0.0191843 433 13 0.021903 539 13 0.1286841 592 11 0.0324427 503 13 0.0518246 1098 13 0.120786 135 12 0.0111252 390 13 0.0748689 406 13 0.0546361 287 13 0.0567582 233 12 0.0575736 588 13 0.0476951 305 12 0.1240387 298 13 0.0844566 350 12 0.0345038 700 13 0.0343769 861 13 0.168476 749 13 0.5545903 326 11 0.45444897 207 11 0.0928161 160 5 0.2968326 100 10 0.4805698 188 11 0.0640435 446 13 0.0215880 735 13 0.0299813 607 13 0.0377838 377 12 0.0128085 588 13 0.0452665 486 13 0.0540382 0.0468402 0.0533778 0.0205301 0.0528259 0.1523203 0.0568957 0.03105510 0.0418877 0.0820359 0.0784346 0.0316930 0.0175189 0.07133744 0.0276695 0.01351098 0.02003271 0.0956468 0.02684102 0.0413380 0.0975060 0.0071971 0.0589973 0.0390024 0.0478886 0.0414365 0.0482090 0.0886605 0.0617449 0.0344796 0.0315103 0.1480635 0.5913218 0.5016723 0.19005823 0.23816632 0.4875548 0.0534011 0.0140428 0.0258137 0.0293978 0.0119926 0.0602390 12 0.0600055 0.0628065 -0.00316631 13 0.065298 0.068377 -0.00307907 0.8663380 7.2060e-01 insignificant 1.00000 1.000000 insignificant 0.735705 5.9174e-01 insignificant 1 1.000000 insignificant -0.0113059 0.48664068 insignificant 1.00000 insignificant 0.0600055 0.3216538 -0.26618913 13 0.065298 0.3019208 -0.23662247 1.0000e+00 8.4803e-31 hypomethylated 1.0000e+00 4.2402e-28 hypomethylated 1.0000e+00 3.6834e-11 hypomethylated 1.0000e+00 3.6834e-08 hypomethylated -0.26274813 2.6787e-02 weaklyHypometh 3.2709e-01 insignificant 0.0600601 0.0250627 0.03451018 13 0.070321 0.028272 0.0420491 3.0187e-04 9.9973e-01 weaklyHypermeth 1.0781e-02 1.0000e+00 weaklyHypermeth 2.1718e-03 9.9931e-01 weaklyHypermeth 1.0342e-01 1.00000000 insignificant 0.03164977 8.2719e-03 weaklyHypermeth 2.7573e-01 insignificant 0.0628065 0.3216538 -0.2637278 13 0.068377 0.3019208 -0.2335434 1.0000e+00 1.3095e-18 hypomethylated 1.0000e+00 6.5475e-16 hypomethylated 1.0000e+00 1.4595e-09 hypomethylated 1.0000e+00 1.4595e-06 hypomethylated -0.2514423 3.1025e-02 weaklyHypometh 3.5677e-01 insignificant 0.062830 0.0250627 0.03593425 13 0.0736372 0.028272 0.04536501 4.8242e-03 9.9952e-01 weaklyHypermeth 1.1766e-01 1.00000000 insignificant 5.3150e-03 9.9620e-01 weaklyHypermeth 1.8982e-01 1.0000000 insignificant 0.04295564 9.1128e-03 weaklyHypermeth 0.56955042 insignificant 0.3225580 0.0250627 0.29842233 13 0.3251454 0.028272 2.9687e-01 1.9467e-10 1.0000e+00 hypermethylated 3.8933e-08 1.0000e+00 hypermethylated 1.4570e-08 1.0000e+00 hypermethylated 7.2852e-06 1.0000e+00 hypermethylated 0.2943979 1.7821e-02 weaklyHypermeth 2.7845e-01 insignificant chr17 44052250 44053250 50707 HOXB8 ENSG00000120068 0.0195805 801 11 0.0424174 853 14 0.0373496 654 14 0.0450753 776 10 0.0262456 581 14 0.1583204 1566 14 0.0286633 717 14 0.0260529 530 14 0.01111111 547 14 0.067255 397 14 0.0504557 488 14 0.0446835 396 14 0.0919616 437 14 0.0031556 292 10 0.0542264 534 14 0.0076812 493 14 0.026653 184 7 0.0669421 1366 10 0.0226657 1037 14 0.0271891 1534 14 0.062063 329 11 0.0000000 156 3 0.0531750 522 14 0.0054553 350 13 0.1112637 277 8 0.0263891 842 14 0.0346765 694 12 0.0278092 318 13 0.0197359 595 14 0.0247075 924 14 0.0290383 1360 14 0.048076 1026 14 0.1653798 668 14 0.08757278 666 14 0.0014286 340 12 0.0000000 75 8 0.2348943 446 10 0.0573839 830 14 0.0751223 1238 11 0.0711210 751 11 0.0099755 678 10 0.1841019 964 10 0.1316797 874 10 0.0243789 0.0180016 0.0325130 0.0076778 0.0265760 0.0791998 0.0334720 0.01296366 0.0105479 0.0381386 0.0255352 0.0562058 0.0171512 0.00666262 0.0203900 0.00365878 0.03284029 0.0189590 0.01291662 0.0159373 0.0641386 0.0000000 0.0318304 0.0086574 0.0254343 0.0123606 0.0430633 0.0342398 0.0176751 0.0044754 0.0102380 0.0316980 0.1213107 0.0472331 0.00859105 0.00000000 0.0937420 0.0167530 0.0119732 0.0133020 0.0030250 0.0208516 0.0187228 8 0.0284888 0.0245025 0.00392584 14 0.074919 0.038129 0.03679058 0.4895789 9.9179e-01 insignificant 1.00000 1.000000 insignificant 0.489584 9.9612e-01 insignificant 1 1.000000 insignificant 0.0060184 0.60716368 insignificant 1.00000 insignificant 0.0284928 0.0691138 -0.04056224 14 0.079082 0.0849922 -0.00591062 9.9990e-01 2.6195e-11 weaklyHypometh 1.0000e+00 3.3899e-09 weaklyHypometh 9.9514e-01 9.0047e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04822564 2.6655e-01 insignificant 1.0000e+00 insignificant 0.0284928 0.0157638 0.01179742 11 0.079082 0.109305 -0.0302239 3.9388e-02 8.1973e-01 weaklyHypermeth 7.0336e-01 1.0000e+00 insignificant 4.2628e-02 9.7791e-01 weaklyHypermeth 8.8807e-01 1.00000000 insignificant -0.05151583 1.5827e-01 insignificant 1.0000e+00 insignificant 0.0245058 0.0691138 -0.0425750 14 0.040247 0.0849922 -0.0447451 1.0000e+00 6.8558e-10 weaklyHypometh 1.0000e+00 1.1426e-07 weaklyHypometh 9.9974e-01 4.7921e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0542441 2.1890e-01 insignificant 1.0000e+00 insignificant 0.024506 0.0157638 0.00676099 11 0.0402471 0.109305 -0.06905837 1.4127e-01 6.9158e-01 insignificant 1.0000e+00 1.00000000 insignificant 3.3100e-01 8.2994e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.05753426 1.2436e-01 insignificant 1.00000000 insignificant 0.0690909 0.0157603 0.04781212 11 0.0805189 0.103553 -2.3034e-02 1.8977e-04 1.0000e+00 weaklyHypermeth 2.3721e-02 1.0000e+00 weaklyHypermeth 1.0511e-01 9.9988e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0032902 9.4718e-01 insignificant 1.0000e+00 insignificant chr17 44233550 44234550 50709 TTLL6 ENSG00000170703 0.9380976 223 5 0.7897898 118 5 0.6333333 89 3 0.9358042 191 5 0.6926190 34 5 0.6441079 208 5 0.9378788 71 5 0.7939620 138 5 0.84717949 75 4 0.879730 106 5 0.9267429 156 5 0.8101587 42 5 0.8828127 111 4 NA 0 0 0.9372944 84 5 0.8666667 29 5 0.895694 108 5 0.8991935 215 5 0.9181335 176 5 0.7592986 171 5 0.850000 18 1 0.8503419 85 5 0.8389610 130 5 0.8950216 98 4 0.8798535 77 5 0.9514972 205 5 0.8171717 65 4 0.8200000 20 2 0.9030275 181 5 0.9316116 276 5 0.9277808 310 5 0.797917 158 4 0.7232446 148 4 0.82928040 81 5 0.7500000 85 2 0.8063187 49 5 0.7588038 58 5 0.3223333 160 2 0.9438228 166 5 0.9259092 246 5 0.9491713 192 5 0.8992488 219 5 0.9013748 274 5 0.9375261 0.8397683 0.7317708 0.9418445 0.6860651 0.7128245 0.9222132 0.85130024 0.8305174 0.8968684 0.9248875 0.7685232 0.8652601 NA 0.9418725 0.83184524 0.87059302 0.9024248 0.93509472 0.7885040 0.9107143 0.8435554 0.8578772 0.9220006 0.8792272 0.9423511 0.8104708 0.8017857 0.9175234 0.9348673 0.9380215 0.8204055 0.8064035 0.8592033 0.68158627 0.82038609 0.7913833 0.3470982 0.9433431 0.9356651 0.9502053 0.9020033 0.8960453 2 0.8938166 0.9051140 -0.01214230 5 0.883318 0.897002 -0.01368426 0.8625855 3.8509e-01 insignificant 1.00000 1.000000 insignificant 0.820392 4.1227e-01 insignificant 1 1.000000 insignificant -0.0304321 0.26899417 lowCoverage 1.00000 lowCoverage 0.8938166 0.6987952 0.19947355 5 0.883318 0.7211987 0.16211915 6.5643e-07 9.3917e-01 weaklyHypermeth 9.5135e-06 1.0000e+00 weaklyHypermeth 4.2642e-03 6.7951e-01 weaklyHypermeth 4.7913e-02 1.0000e+00 weaklyHypermeth 0.14316970 1.2506e-01 lowCoverage 1.0000e+00 lowCoverage 0.8938166 0.9179581 -0.02456238 5 0.883318 0.919939 -0.0366212 6.8489e-01 1.3880e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3171e-01 3.4197e-02 weaklyHypometh 1.0000e+00 0.77720627 insignificant -0.08240558 3.3029e-03 lowCoverage 1.5386e-01 lowCoverage 0.9051140 0.6987952 0.2104138 5 0.897002 0.7211987 0.1758034 2.7257e-06 9.8319e-01 hypermethylated 4.0682e-05 1.0000e+00 hypermethylated 7.4925e-04 7.5563e-01 hypermethylated 1.1352e-02 1.0000e+00 hypermethylated 0.1736018 7.3519e-02 lowCoverage 6.3929e-01 lowCoverage 0.905114 0.9179581 -0.01408251 5 0.8970021 0.919939 -0.02293699 8.1247e-01 2.0132e-01 insignificant 1.0000e+00 1.00000000 insignificant 9.4016e-01 7.5881e-02 insignificant 1.0000e+00 1.0000000 insignificant -0.05197346 1.0930e-02 lowCoverage 0.60722156 lowCoverage 0.6987952 0.9179581 -0.21788916 5 0.7211987 0.919939 -1.9874e-01 9.9682e-01 6.8734e-04 hypomethylated 1.0000e+00 9.6808e-03 hypomethylated 9.5095e-01 1.2207e-03 weaklyHypometh 1.0000e+00 2.2606e-02 weaklyHypometh -0.2255753 3.2044e-02 lowCoverage 3.9560e-01 lowCoverage chr17 44447350 44448350 50717 IGF2BP1 ENSG00000159217 0.6815323 768 17 0.6646773 651 22 0.7462438 392 18 0.7434944 692 16 0.7225599 225 17 0.7011761 1026 22 0.7333679 313 14 0.6931262 493 18 0.78454657 359 19 0.744799 422 19 0.7458358 933 24 0.6611263 216 16 0.7242869 567 22 0.6389879 248 9 0.7466116 342 19 0.6777988 177 13 0.812626 213 14 0.6206664 778 16 0.7226893 993 21 0.6951393 1000 24 0.648171 275 20 0.5444478 195 14 0.6952527 456 20 0.7467064 200 17 0.7052468 188 14 0.7389246 556 21 0.6872458 428 19 0.7049013 126 10 0.6831815 478 21 0.7820574 617 22 0.7880710 656 19 0.729743 1019 19 0.4978752 439 21 0.55399710 436 20 0.5791823 600 11 0.6609516 98 8 0.5777308 390 22 0.5839898 600 21 0.7959676 543 16 0.6727308 747 20 0.6447608 650 13 0.6153537 518 13 0.6647534 443 16 0.7148752 0.6804521 0.7012407 0.7690645 0.7245009 0.7758796 0.7418841 0.73047563 0.7473912 0.8021237 0.7869428 0.6744840 0.7389555 0.74587385 0.7691532 0.65309984 0.75511694 0.7168408 0.73381924 0.7568021 0.7469448 0.6060750 0.7545482 0.7942140 0.7890027 0.8064763 0.7446325 0.7108978 0.7370743 0.7923615 0.8052407 0.7489396 0.4862334 0.6015652 0.56636209 0.64385833 0.5813463 0.6081634 0.7881731 0.7451669 0.7174117 0.7190143 0.7254416 11 0.7788675 0.7841740 -0.01940987 18 0.683897 0.685850 -0.00195319 0.9858079 2.1521e-02 weaklyHypometh 1.00000 0.977643 insignificant 0.889070 2.7317e-02 weaklyHypometh 1 1.000000 insignificant 0.0085688 0.69533495 insignificant 1.00000 insignificant 0.7788675 0.6227078 0.15121108 18 0.683897 0.5331894 0.15070772 1.2192e-29 9.9997e-01 weaklyHypermeth 6.4170e-28 1.0000e+00 weaklyHypermeth 5.7283e-09 9.9966e-01 weaklyHypermeth 2.0366e-07 1.0000e+00 weaklyHypermeth 0.13744349 5.2363e-04 weaklyHypermeth 1.3091e-02 weaklyHypermeth 0.7788675 0.7442261 -0.00467412 15 0.683897 0.654708 0.0291887 1.5810e-02 3.8404e-03 weaklyHypometh 3.2938e-01 1.7456e-01 insignificant 4.1282e-02 2.4271e-02 weaklyHypometh 8.7834e-01 0.63870300 insignificant 0.03435137 3.4199e-01 insignificant 1.0000e+00 insignificant 0.7841740 0.6227078 0.1666832 18 0.685850 0.5331894 0.1526609 1.9110e-22 9.9727e-01 weaklyHypermeth 9.1001e-21 1.0000e+00 weaklyHypermeth 6.5189e-09 9.9781e-01 weaklyHypermeth 3.1042e-07 1.0000e+00 weaklyHypermeth 0.1288746 6.6737e-04 weaklyHypermeth 1.6277e-02 weaklyHypermeth 0.784174 0.7442261 0.01009127 15 0.6858504 0.654708 0.03114189 3.3971e-02 2.9203e-01 weaklyHypermeth 6.0663e-01 1.00000000 insignificant 3.2817e-01 4.1446e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.02578252 4.9855e-01 insignificant 1.00000000 insignificant 0.6227078 0.7442261 -0.16635983 15 0.5331894 0.654708 -1.2152e-01 9.9998e-01 8.8040e-09 weaklyHypometh 1.0000e+00 2.7512e-07 weaklyHypometh 9.9999e-01 2.3155e-04 weaklyHypometh 1.0000e+00 5.5131e-03 weaklyHypometh -0.1030921 2.7520e-02 weaklyHypometh 3.5283e-01 insignificant chr17 44459250 44460250 50719 IGF2BP1 ENSG00000159217 0.7120728 543 14 0.6766242 393 14 0.6264522 282 13 0.7765784 498 14 0.7582672 192 13 0.7002336 786 14 0.6392171 234 14 0.7283914 316 14 0.65527188 215 13 0.718283 211 14 0.6803744 690 14 0.5951613 169 9 0.7732303 234 12 0.6526366 134 10 0.7479020 294 14 0.7284864 120 9 0.773618 1068 8 0.7618294 379 14 0.7349153 243 13 0.7039864 581 14 0.748162 135 10 0.7230344 169 13 0.7304792 345 14 0.7260544 199 12 0.7566450 166 12 0.7361395 381 14 0.7952949 211 8 0.6221034 132 7 0.6942807 217 13 0.7526733 437 14 0.7581599 453 14 0.750779 726 14 0.6907951 360 14 0.54702652 190 14 0.6788796 396 14 0.7867133 61 6 0.5707032 218 10 0.6344336 436 14 0.7532457 577 14 0.7907578 656 14 0.7954046 729 14 0.8371567 383 13 0.7650397 589 14 0.7799141 0.7106055 0.6936305 0.8133640 0.7605374 0.7696506 0.7253964 0.77452006 0.6925086 0.7809587 0.7841232 0.7271991 0.8288481 0.78434893 0.7776036 0.79168989 0.81158943 0.7702056 0.80206718 0.7735302 0.9014355 0.7761581 0.7555467 0.7606027 0.7979742 0.7481595 0.7746544 0.6462539 0.6596027 0.7248150 0.7675392 0.7863649 0.6946248 0.7378005 0.72290760 0.73095315 0.6219099 0.6717848 0.7629027 0.8030224 0.7689343 0.8199666 0.8125368 7 0.7781588 0.7770933 0.00792397 14 0.679468 0.699412 -0.01994408 0.4640239 5.6082e-01 insignificant 1.00000 1.000000 insignificant 0.838454 2.3648e-01 insignificant 1 1.000000 insignificant -0.0256405 0.14538136 insignificant 1.00000 insignificant 0.7785705 0.7122216 0.07884208 14 0.706990 0.6261483 0.08084193 1.3969e-09 9.9985e-01 weaklyHypermeth 2.4944e-08 1.0000e+00 weaklyHypermeth 5.5940e-05 9.9992e-01 weaklyHypermeth 1.0359e-03 1.0000e+00 weaklyHypermeth 0.05575137 1.8812e-01 insignificant 1.0000e+00 insignificant 0.7784376 0.8159509 -0.02158062 14 0.700942 0.808908 -0.1079665 9.9865e-01 1.6755e-02 weaklyHypometh 1.0000e+00 3.9893e-01 insignificant 9.9993e-01 4.6610e-02 weaklyHypometh 1.0000e+00 0.95122339 insignificant -0.08114433 1.4335e-03 weaklyHypometh 1.0240e-01 insignificant 0.7772166 0.7122216 0.0708754 14 0.716921 0.6261483 0.0907729 2.0179e-06 9.9982e-01 weaklyHypermeth 3.2030e-05 1.0000e+00 weaklyHypermeth 4.7636e-04 9.9969e-01 weaklyHypermeth 7.9394e-03 1.0000e+00 weaklyHypermeth 0.0813919 7.3155e-02 insignificant 6.3929e-01 insignificant 0.777249 0.8159509 -0.03532812 14 0.7093830 0.808908 -0.09952519 9.9998e-01 4.5552e-02 weaklyHypometh 1.0000e+00 1.00000000 insignificant 9.9980e-01 1.1230e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.05550378 1.5455e-02 weaklyHypometh 0.73159591 insignificant 0.7122216 0.8157625 -0.10018055 14 0.6261483 0.775186 -1.4904e-01 1.0000e+00 3.3306e-07 weaklyHypometh 1.0000e+00 7.2404e-06 weaklyHypometh 1.0000e+00 3.3053e-05 weaklyHypometh 1.0000e+00 1.1805e-03 weaklyHypometh -0.1368957 1.0408e-02 weaklyHypometh 1.8923e-01 insignificant chr17 44681350 44682350 50722 ENSG00000177369 0.7476141 158 4 0.5221865 205 6 0.7358578 193 6 0.9249877 133 2 0.7702528 169 6 0.8204785 285 6 0.6882849 234 6 0.8382814 127 5 0.65772979 126 6 0.884354 101 6 0.7663617 255 6 0.7844766 132 6 0.6333055 163 6 0.9666667 33 1 0.5909876 181 6 0.8714772 134 6 0.780659 406 6 0.6075032 158 4 0.7722836 341 6 0.7453356 229 5 0.812706 124 6 0.0769231 14 1 0.7194923 132 6 0.9452824 82 5 0.3055556 23 1 0.6942125 203 6 0.8356106 103 4 0.6248541 64 5 0.6121117 157 6 0.7600371 219 6 0.5463116 266 6 0.962415 151 4 0.0595675 181 6 0.07984785 250 6 0.0969873 175 5 0.1428571 26 1 0.1086158 134 5 0.3412982 227 6 0.5856643 150 5 0.7703112 168 4 0.4749606 155 3 0.6894872 171 2 0.5550351 168 2 0.7482309 0.6258466 0.6645371 0.8124476 0.7906445 0.8577026 0.8365211 0.79172356 0.6455418 0.9282846 0.7334608 0.6684102 0.5735326 0.93795274 0.7032858 0.79675568 0.85818525 0.5769883 0.75056437 0.7629210 0.7480366 0.1979881 0.8019826 0.8920186 0.5544843 0.6912066 0.8183675 0.8261674 0.6497454 0.7546771 0.5456360 0.8933648 0.0300999 0.0642668 0.04487843 0.03614458 0.1217667 0.1834531 0.5129870 0.6543719 0.5638981 0.4796017 0.4059681 2 0.7713982 0.7167969 0.05009369 6 0.657391 0.763826 -0.10643537 0.2260019 9.7306e-01 insignificant 1.00000 1.000000 insignificant 0.634133 7.0572e-01 insignificant 1 1.000000 insignificant 0.0974948 0.23429463 lowCoverage 1.00000 lowCoverage 0.7713982 0.0966767 0.67138631 6 0.657391 0.1203274 0.53706348 2.8392e-45 1.0000e+00 hypermethylated 7.0980e-43 1.0000e+00 hypermethylated 1.8908e-15 1.0000e+00 hypermethylated 3.7483e-13 1.0000e+00 hypermethylated 0.61725856 5.1941e-07 lowCoverage 2.8856e-05 lowCoverage 0.7716640 0.5073892 0.25669928 3 0.782391 0.697873 0.0845175 9.6388e-07 9.9613e-01 lowCoverage 7.4145e-05 1.0000e+00 lowCoverage 2.2961e-04 9.5212e-01 lowCoverage 1.4351e-02 1.00000000 lowCoverage 0.14036249 5.0563e-02 lowCoverage 9.5401e-01 lowCoverage 0.7167969 0.0966767 0.6250934 6 0.763826 0.1203274 0.6434989 6.4330e-27 1.0000e+00 hypermethylated 4.2887e-25 1.0000e+00 hypermethylated 3.6629e-11 1.0000e+00 hypermethylated 4.0699e-09 1.0000e+00 hypermethylated 0.5197637 1.6849e-05 lowCoverage 7.0206e-04 lowCoverage 0.716612 0.5067818 0.19315916 3 0.7300872 0.654712 0.07537477 3.3008e-03 9.7017e-01 lowCoverage 8.9210e-02 1.00000000 lowCoverage 3.6461e-02 9.8461e-01 lowCoverage 9.1153e-01 1.0000000 lowCoverage 0.04286765 6.4227e-01 lowCoverage 1.00000000 lowCoverage 0.0968718 0.5067818 -0.43683029 3 0.1375171 0.654712 -5.1720e-01 1.0000e+00 5.6024e-13 lowCoverage 1.0000e+00 3.5015e-11 lowCoverage 1.0000e+00 1.3234e-06 lowCoverage 1.0000e+00 1.0448e-04 lowCoverage -0.4768961 8.8087e-05 lowCoverage 5.8724e-03 lowCoverage chr17 44741750 44742750 50723 ENSG00000177369 0.8105263 94 5 0.6948587 87 5 0.6495238 43 5 0.6409023 104 5 0.7654762 39 5 0.8378736 153 5 0.5151515 35 5 0.8071429 79 5 0.68095238 61 5 0.938776 44 5 0.8451467 124 5 0.5000000 13 1 0.7447059 57 5 0.7721088 42 5 0.8528265 56 5 0.6500000 19 0 0.900000 11 0 0.8947701 135 5 0.9600000 52 5 0.9001832 73 5 0.833333 20 1 0.8560440 57 4 0.7715909 62 5 0.5824830 42 5 0.8964286 37 5 0.8076923 126 5 0.8200000 45 5 0.9629630 16 1 0.6500000 40 4 0.6745728 63 5 0.6121032 81 5 0.780736 112 5 0.6621377 118 5 0.73809524 36 5 0.7612852 88 5 0.7666667 14 0 0.4778571 47 5 0.8200000 69 5 0.8545455 56 5 0.8777778 90 5 0.8300000 92 5 0.8377778 49 5 0.9375000 82 5 0.8327595 0.7829927 0.6351580 0.9018396 0.7932799 0.8271479 0.5562164 0.79617267 0.7107254 0.9198932 0.8356640 0.5700935 0.7507422 0.89497107 0.8407389 0.68224299 0.90654206 0.8900929 0.96261682 0.8893910 0.8099688 0.8683373 0.7808517 0.6223854 0.8885180 0.8317757 0.8373832 0.9356179 0.7985981 0.7570988 0.7636293 0.7954141 0.8059732 0.9038718 0.77964481 0.73052960 0.5313752 0.8408100 0.8708581 0.8857736 0.8504673 0.8455867 0.9439252 1 0.8205905 0.7888730 0.02415086 5 0.695239 0.765225 -0.06998632 0.5362427 8.4322e-01 insignificant 1.00000 1.000000 insignificant 0.740299 6.4731e-01 insignificant 1 1.000000 insignificant -0.0026160 0.95411221 lowCoverage 1.00000 lowCoverage 0.8212376 0.7768817 0.04017245 5 0.674604 0.6383169 0.03628745 2.8140e-01 9.7918e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.8994e-01 8.3782e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.06370590 3.0105e-01 lowCoverage 1.0000e+00 lowCoverage 0.8218654 0.8672087 -0.05872562 5 0.809525 0.868559 -0.0590338 9.9293e-01 4.4927e-02 weaklyHypometh 1.0000e+00 8.3198e-01 insignificant 9.9869e-01 1.5487e-02 weaklyHypometh 1.0000e+00 0.49688888 insignificant -0.09947399 1.0391e-02 lowCoverage 3.2472e-01 lowCoverage 0.7879656 0.7768817 0.0161049 5 0.686967 0.6383169 0.0486502 4.0206e-01 8.5366e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.9547e-01 6.9577e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0663219 2.9830e-01 lowCoverage 1.0000e+00 lowCoverage 0.792208 0.8672087 -0.08386781 5 0.7843604 0.868559 -0.08419857 9.9975e-01 1.7166e-03 weaklyHypometh 1.0000e+00 0.13372932 insignificant 9.9426e-01 1.9386e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant -0.09685796 2.5581e-02 lowCoverage 0.77397739 lowCoverage 0.7810811 0.8672087 -0.10052086 5 0.7659802 0.868559 -1.0258e-01 9.9750e-01 4.7521e-03 weaklyHypometh 1.0000e+00 5.0554e-02 weaklyHypometh 9.8085e-01 9.3821e-03 weaklyHypometh 1.0000e+00 1.2028e-01 insignificant -0.1631799 2.0660e-02 lowCoverage 3.0382e-01 lowCoverage chr17 45186550 45187550 50734 SLC35B1 ENSG00000121073 0.8159030 192 6 0.7024434 145 6 0.6278496 90 6 0.8255802 107 6 0.8730159 51 6 0.7527525 302 6 0.8222738 81 6 0.7103497 91 6 0.67455717 56 3 0.907059 54 6 0.7954493 202 6 0.7437500 44 3 0.7140568 75 6 0.7897727 23 1 0.8965548 69 6 0.9333333 31 2 0.723291 60 3 0.7039702 155 6 0.7742764 111 6 0.7586959 210 6 0.958333 15 1 0.9555556 39 3 0.8283769 133 6 0.8708333 41 3 0.8137255 37 3 0.7963341 179 6 0.7236364 46 3 0.9113095 33 3 0.7993731 107 6 0.7573912 148 6 0.7837150 150 6 0.760254 218 6 0.6063989 108 6 0.66825397 87 6 0.7055445 97 6 0.8944444 37 3 0.7476190 61 6 0.7291216 147 6 0.8347070 147 6 0.6819463 168 6 0.8795194 152 5 0.8347383 115 6 0.8232759 127 6 0.8798768 0.7243744 0.7202376 0.8959353 0.8967699 0.8577362 0.8118163 0.83958232 0.7876085 0.8899609 0.8727608 0.8020105 0.7117306 0.85918804 0.9317425 0.92727273 0.80007172 0.7814918 0.84916064 0.8653084 0.8974079 0.9439614 0.8670972 0.8966783 0.9066228 0.8539632 0.8350873 0.8838015 0.8605878 0.8591405 0.9289165 0.8071223 0.7628773 0.7335677 0.77915791 0.91282051 0.8763237 0.7593530 0.9064445 0.8305406 0.9155197 0.8544298 0.9151646 2 0.7960894 0.8167539 -0.02446511 6 0.825236 0.841870 -0.01663389 0.9974128 4.0316e-01 insignificant 1.00000 1.000000 insignificant 0.997631 1.6472e-01 insignificant 1 1.000000 insignificant -0.0526564 0.08171774 lowCoverage 1.00000 lowCoverage 0.7959944 0.7448790 0.04719112 6 0.800270 0.6239418 0.17632843 8.7895e-02 9.9651e-01 insignificant 4.9940e-01 1.0000e+00 insignificant 1.6617e-01 9.9549e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.05201633 2.7018e-01 insignificant 1.0000e+00 insignificant 0.7958993 0.8251058 -0.03593558 6 0.766982 0.795107 -0.0281253 9.7071e-01 1.4564e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9389e-01 7.8410e-02 insignificant 1.0000e+00 1.00000000 insignificant -0.03359063 4.1145e-01 insignificant 1.0000e+00 insignificant 0.8165939 0.7448790 0.0720750 6 0.819280 0.6239418 0.1953386 5.9796e-03 9.9893e-01 weaklyHypermeth 4.4960e-02 1.0000e+00 weaklyHypermeth 1.3182e-02 9.9744e-01 weaklyHypermeth 1.2206e-01 1.0000e+00 insignificant 0.1046727 4.8989e-02 lowCoverage 4.9484e-01 lowCoverage 0.816434 0.8251058 -0.00903319 6 0.7891604 0.795107 -0.00594675 8.3425e-01 4.8917e-01 insignificant 1.0000e+00 1.00000000 insignificant 8.2405e-01 5.1402e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.01906578 6.5016e-01 lowCoverage 1.00000000 lowCoverage 0.7462687 0.8251058 -0.08117720 6 0.7279321 0.795107 -6.7175e-02 9.9276e-01 9.7305e-03 weaklyHypometh 1.0000e+00 8.7662e-02 weaklyHypometh 9.9972e-01 8.0333e-03 weaklyHypometh 1.0000e+00 1.0570e-01 insignificant -0.0856070 1.3361e-01 insignificant 1.0000e+00 insignificant chr17 45200650 45201650 50735 FAM117A ENSG00000121104 0.7260344 108 8 0.6540529 115 7 0.5133929 59 3 0.8511801 78 8 0.7358366 68 4 0.7174423 126 8 0.5951949 88 4 0.5506614 74 7 0.61507937 62 4 0.677083 58 3 0.7280969 143 8 0.4916667 33 4 0.6642857 75 6 0.6062500 29 2 0.7250000 45 4 0.4788690 46 4 0.680492 623 5 0.5995942 85 7 0.6507576 62 4 0.6481647 110 8 0.472687 54 3 0.5255952 65 5 0.5838964 69 6 0.6501603 55 5 0.5784091 51 6 0.6253317 130 8 0.5226190 28 3 0.6410256 18 1 0.6016865 71 7 0.7281719 118 8 0.6668470 99 8 0.651548 124 8 0.6275839 74 8 0.81736111 46 3 0.5948593 109 8 0.6250000 5 0 0.5835363 73 5 0.6008268 127 8 0.6546379 106 4 0.7559349 128 8 0.7000000 90 6 0.6302083 22 1 0.6171266 112 6 0.7607573 0.7080337 0.6016731 0.8818434 0.7442700 0.7626783 0.6745641 0.65460699 0.6382096 0.7334835 0.7742303 0.6105953 0.7026384 0.55270270 0.7468468 0.59927070 0.75106018 0.6794587 0.67343707 0.7014300 0.5493053 0.5044616 0.6550605 0.7130053 0.6070434 0.7306553 0.6023166 0.6741720 0.6491491 0.7863091 0.6989912 0.7252777 0.6689306 0.8313313 0.51345501 0.59613357 0.6401125 0.6893946 0.7357179 0.8116120 0.7385671 0.6828078 0.7169380 1 0.6636320 0.7086168 0.03460790 7 0.665722 0.632085 0.03363703 0.0033764 5.4403e-01 weaklyHypermeth 0.91314 1.000000 insignificant 0.015073 8.4111e-01 weaklyHypermeth 1 1.000000 insignificant 0.0414585 0.16805221 insignificant 1.00000 insignificant 0.6636320 0.6566820 0.06412849 7 0.665722 0.6295637 0.03615810 1.4367e-02 9.0058e-01 weaklyHypermeth 9.5779e-02 1.0000e+00 weaklyHypermeth 3.0653e-01 7.9008e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00392884 9.2658e-01 insignificant 1.0000e+00 insignificant 0.6636320 0.6855895 -0.03445325 5 0.665722 0.685445 -0.0197233 8.7546e-01 2.0353e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3433e-01 1.0728e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.02612481 4.4342e-01 insignificant 1.0000e+00 insignificant 0.7086168 0.6566820 0.0327606 8 0.632085 0.6295637 0.0025211 2.3160e-01 6.1000e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.1027e-01 1.1839e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0375297 3.8992e-01 insignificant 1.0000e+00 insignificant 0.708617 0.6855895 -0.04797896 6 0.6320848 0.685445 -0.05336036 8.9382e-01 5.5443e-03 weaklyHypometh 1.0000e+00 0.27721267 insignificant 9.1600e-01 1.7772e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant -0.06758332 6.7374e-02 insignificant 1.00000000 insignificant 0.6566820 0.6855895 -0.07498670 6 0.6295637 0.685445 -5.5881e-02 9.3203e-01 5.8450e-02 insignificant 1.0000e+00 3.7710e-01 insignificant 7.6091e-01 9.9347e-02 insignificant 1.0000e+00 7.2382e-01 insignificant -0.0300536 5.1202e-01 insignificant 1.0000e+00 insignificant chr17 45495950 45496950 50744 ITGA3 ENSG00000005884 0.8856410 50 4 0.8168335 121 5 0.8786872 181 5 0.9646465 45 2 0.8505860 121 5 0.9094719 195 5 0.8591255 179 5 0.8641696 116 5 0.86174242 123 5 0.945106 72 4 0.8729491 167 5 0.9332353 114 4 0.8605984 132 4 0.6597222 25 2 0.8979906 141 5 0.8255556 46 3 0.879811 120 3 0.8437500 47 2 0.9604153 187 5 0.9116667 136 5 0.858462 41 4 0.7727273 17 1 0.9357488 86 5 0.9506892 108 5 0.6194444 17 2 0.9204446 138 5 0.7733333 71 5 0.9862069 88 5 0.8733571 146 5 0.8742342 140 5 0.8743110 207 5 0.853692 115 5 0.6259009 134 4 0.69727011 87 5 0.6407407 127 4 0.3333333 3 0 0.7340532 118 5 0.6662239 145 5 0.9535714 57 3 0.9358974 54 5 1.0000000 31 1 0.8066667 24 1 0.9200000 27 2 0.9264849 0.7709479 0.8372854 0.9671611 0.8816754 0.9238892 0.8502489 0.89868349 0.8404056 0.9119815 0.8801314 0.9321668 0.8588006 0.76902755 0.8880929 0.88888889 0.92688867 0.6522943 0.94307913 0.8717300 0.9293087 0.8034137 0.9327646 0.9552600 0.7019058 0.9170538 0.6874623 0.9589699 0.8301175 0.8786293 0.8850753 0.8411626 0.3191356 0.3396079 0.31484806 0.23307483 0.3806713 0.3196503 0.9511001 0.9594288 1.0000000 0.8151899 0.9181435 1 0.8822261 0.8935264 -0.01707075 5 0.880917 0.893339 -0.01242191 0.8216953 1.9201e-01 insignificant 1.00000 1.000000 insignificant 0.566366 4.3646e-01 insignificant 1 1.000000 insignificant 0.0163643 0.61594776 lowCoverage 1.00000 lowCoverage 0.8822261 0.5863192 0.29714640 5 0.880917 0.6852050 0.19571238 9.8283e-14 5.3721e-01 hypermethylated 2.3401e-12 1.0000e+00 hypermethylated 2.0048e-03 5.7412e-01 weaklyHypermeth 2.4751e-02 1.0000e+00 weaklyHypermeth 0.25783147 6.1626e-03 lowCoverage 1.1205e-01 lowCoverage 0.8822261 0.9222798 -0.04877311 3 0.880917 0.920440 -0.0395221 9.2022e-01 4.4360e-04 lowCoverage 1.0000e+00 2.9573e-02 lowCoverage 9.8964e-01 6.5722e-04 lowCoverage 1.0000e+00 0.08215300 lowCoverage -0.04914194 2.1449e-01 lowCoverage 1.0000e+00 lowCoverage 0.8935264 0.5863192 0.2917872 5 0.893339 0.6852050 0.2081343 1.7119e-12 8.1573e-01 hypermethylated 4.3895e-11 1.0000e+00 hypermethylated 3.9131e-03 8.3912e-01 weaklyHypermeth 4.2533e-02 1.0000e+00 weaklyHypermeth 0.2414671 6.9068e-03 lowCoverage 1.1511e-01 lowCoverage 0.893526 0.9222798 -0.04187405 3 0.8933393 0.920440 -0.02710024 7.7499e-01 2.3212e-02 lowCoverage 1.0000e+00 0.80041221 lowCoverage 9.6344e-01 3.7077e-03 lowCoverage 1.0000e+00 0.4634586 lowCoverage -0.06550627 1.5645e-01 lowCoverage 1.00000000 lowCoverage 0.5863192 0.9222798 -0.49345025 3 0.6852050 0.920440 -2.3523e-01 9.6419e-01 2.6967e-10 lowCoverage 1.0000e+00 1.0372e-08 lowCoverage 9.9988e-01 1.2940e-03 lowCoverage 1.0000e+00 2.3526e-02 lowCoverage -0.3069734 2.0613e-03 lowCoverage 6.0137e-02 lowCoverage chr17 45610250 45611250 50747 HILS1 ENSG00000188662 0.1155093 705 13 0.0772998 594 14 0.0777327 566 14 0.0782340 671 14 0.0905247 388 13 0.1830364 1342 14 0.1175476 491 14 0.0886035 525 14 0.10264976 503 14 0.092938 638 14 0.1331568 624 14 0.0785130 398 14 0.0834245 491 14 0.1772455 260 12 0.0809179 622 14 0.0798352 345 14 0.066594 266 8 0.1054945 1254 14 0.0452220 944 14 0.1365934 1109 14 0.134190 237 14 0.1429768 457 14 0.0917272 423 14 0.0774717 360 14 0.1244800 551 12 0.1012001 698 14 0.1881700 599 14 0.1024076 305 13 0.0977285 607 14 0.0692584 780 14 0.0993324 1156 14 0.166226 670 14 0.0330743 519 13 0.01341303 531 12 0.0726959 438 14 0.0000000 119 7 0.1018188 455 14 0.0261692 735 14 0.1280051 780 14 0.1504702 683 14 0.0829596 678 14 0.1182697 997 12 0.0872724 737 14 0.1344607 0.0853229 0.0852661 0.0865005 0.0860732 0.2107325 0.1349414 0.09254318 0.1236176 0.1263370 0.1549309 0.0939214 0.0774717 0.11371243 0.0804097 0.08417291 0.07293802 0.1062066 0.05178355 0.1169196 0.1642378 0.1278421 0.1086057 0.0723485 0.1253112 0.0970350 0.1650356 0.1141138 0.1044735 0.0748262 0.1010930 0.1748030 0.0285743 0.0123817 0.05139827 0.00200857 0.0866866 0.0195232 0.1393590 0.1493287 0.0933077 0.0981612 0.0851504 12 0.0997408 0.1029842 -0.00270767 14 0.160934 0.105752 0.05518202 0.8589268 1.5811e-01 insignificant 1.00000 1.000000 insignificant 0.717973 3.4831e-02 weaklyHypometh 1 1.000000 insignificant -0.0157104 0.23825310 insignificant 1.00000 insignificant 0.0997408 0.0389703 0.06584203 14 0.160934 0.0546077 0.10632610 8.2860e-10 9.4875e-01 weaklyHypermeth 1.5344e-08 1.0000e+00 weaklyHypermeth 5.2345e-09 9.9998e-01 weaklyHypermeth 1.9387e-07 1.0000e+00 weaklyHypermeth 0.05935845 1.0323e-02 weaklyHypermeth 1.6130e-01 insignificant 0.0996701 0.1140645 -0.00957264 14 0.101000 0.111891 -0.0108905 1.6860e-01 1.0381e-04 weaklyHypometh 1.0000e+00 1.0381e-02 weaklyHypometh 1.9868e-01 1.4268e-02 weaklyHypometh 1.0000e+00 0.49688888 insignificant -0.01284172 4.1606e-01 insignificant 1.0000e+00 insignificant 0.1029842 0.0389703 0.0670527 14 0.105752 0.0546077 0.0511441 6.1059e-09 9.9991e-01 weaklyHypermeth 1.2461e-07 1.0000e+00 weaklyHypermeth 9.3721e-09 1.0000e+00 weaklyHypermeth 4.2601e-07 1.0000e+00 weaklyHypermeth 0.0750689 2.8782e-03 weaklyHypermeth 5.6048e-02 weaklyHypermeth 0.102999 0.1140645 -0.00298685 14 0.1133055 0.111891 0.00141444 1.5327e-01 1.5153e-01 insignificant 1.0000e+00 1.00000000 insignificant 2.3782e-01 1.0419e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.00286872 8.6458e-01 insignificant 1.00000000 insignificant 0.0389843 0.1140645 -0.07001047 14 0.0585083 0.111891 -5.3383e-02 9.9947e-01 3.9989e-08 weaklyHypometh 1.0000e+00 1.1108e-06 weaklyHypometh 1.0000e+00 1.3582e-06 weaklyHypometh 1.0000e+00 1.0448e-04 weaklyHypometh -0.0722002 6.1081e-03 weaklyHypometh 1.2725e-01 insignificant chr17 45653050 45654050 50753 COL1A1 ENSG00000108821 0.9333333 19 1 0.7614719 63 5 0.8305556 48 5 0.9333333 11 0 0.7900000 27 4 0.8394516 66 5 0.8341991 36 5 0.8166667 34 3 0.73333333 24 3 0.915873 28 3 0.9046593 77 5 0.6600000 25 2 0.9241715 70 5 NA 0 0 0.8873932 40 5 0.5000000 22 1 0.846429 26 3 0.8333333 12 0 0.8820323 75 5 0.9238141 119 5 0.705051 33 3 1.0000000 4 0 0.6834632 34 5 0.8750000 9 0 1.0000000 9 0 0.7943434 54 5 0.9208333 52 5 0.7500000 5 0 0.8787879 36 3 0.8901515 53 5 0.9426252 78 5 0.842943 103 5 0.5201723 57 5 0.90105377 57 5 0.7930672 116 5 0.7500000 14 0 0.7128571 33 4 0.7333333 44 5 0.9166667 12 0 0.9482353 51 5 0.9333333 11 0 1.0000000 10 0 1.0000000 7 0 1.0000000 0.7918871 0.9310700 1.0000000 0.8370370 0.9236981 0.8201058 0.79876543 0.7345679 0.8974133 0.8886528 0.7148148 0.9315226 NA 0.9439696 0.46296296 0.81768078 0.9314825 0.91259603 0.9391026 0.8514777 1.0000000 0.6666667 0.8888889 0.9768986 0.8342686 0.9436728 0.8148148 0.9494949 0.8936588 0.9647832 0.8493317 0.6288209 0.9185126 0.81908315 0.88888889 0.8582011 0.9074074 1.0000000 0.9315904 1.0000000 1.0000000 0.9888889 0 0.8515815 0.8617021 -0.00572346 5 0.841362 0.855677 -0.01431585 0.7326098 4.6418e-01 insignificant 1.00000 1.000000 insignificant 0.903758 1.2738e-01 insignificant 1 1.000000 insignificant -0.0279831 0.48427106 lowCoverage 1.00000 lowCoverage 0.8515815 0.7476636 0.10219776 5 0.841362 0.7407388 0.10062276 2.1080e-03 9.0675e-01 weaklyHypermeth 1.6341e-02 1.0000e+00 weaklyHypermeth 4.5819e-02 6.8763e-01 weaklyHypermeth 3.4450e-01 1.0000e+00 insignificant 0.09386939 1.3856e-01 lowCoverage 1.0000e+00 lowCoverage 0.8515815 0.9450549 -0.09428470 1 0.841362 0.954056 -0.1126942 9.9915e-01 1.0223e-02 lowCoverage 1.0000e+00 3.0980e-01 lowCoverage 9.9997e-01 9.8932e-04 lowCoverage 1.0000e+00 0.09893202 lowCoverage -0.13069705 3.5601e-04 lowCoverage 3.9557e-02 lowCoverage 0.8617021 0.7476636 0.0859174 5 0.855677 0.7407388 0.1149386 5.6932e-03 9.5175e-01 weaklyHypermeth 4.3130e-02 1.0000e+00 weaklyHypermeth 3.6545e-02 8.9791e-01 weaklyHypermeth 2.9472e-01 1.0000e+00 insignificant 0.1218525 7.1339e-02 lowCoverage 6.3695e-01 lowCoverage 0.861702 0.9450549 -0.09123857 1 0.8556774 0.954056 -0.09837838 9.9922e-01 5.4627e-03 lowCoverage 1.0000e+00 0.27721267 lowCoverage 9.9924e-01 7.6942e-03 lowCoverage 1.0000e+00 0.7694218 lowCoverage -0.10271391 1.0350e-02 lowCoverage 0.60722156 lowCoverage 0.7476636 0.9450549 -0.21988861 1 0.7407388 0.954056 -2.1332e-01 1.0000e+00 2.9969e-04 lowCoverage 1.0000e+00 4.4729e-03 lowCoverage 1.0000e+00 8.5746e-04 lowCoverage 1.0000e+00 1.6813e-02 lowCoverage -0.2245664 5.6073e-03 lowCoverage 1.2461e-01 lowCoverage chr17 46363650 46364650 50770 TOB1 ENSG00000141232 0.0601462 265 9 0.0228395 137 9 0.0181667 230 9 0.0075664 291 8 0.0681698 95 9 0.0954574 570 9 0.0374561 245 9 0.0416667 94 5 0.03340548 210 9 0.029488 143 9 0.0231605 181 9 0.0407692 169 9 0.0115385 181 9 NA 0 0 0.0153439 165 9 0.0552976 232 9 0.068423 305 9 0.0758289 253 10 0.0416667 157 9 0.0118532 459 9 0.043100 93 7 0.0370146 212 9 0.0052712 300 9 0.0100000 127 8 0.0544643 172 9 0.0101010 220 9 0.0928301 186 9 0.0181818 88 9 0.0253846 86 8 0.1293933 216 9 0.0141188 439 9 0.044669 397 9 0.0048309 142 9 0.01728395 131 9 0.0952381 69 5 0.0061728 131 9 0.1077941 96 7 0.0214387 157 9 0.0936970 348 9 0.0065704 271 9 0.0121302 166 9 0.0196424 239 9 0.0371587 336 9 0.0552761 0.0257191 0.0215398 0.0207915 0.0742070 0.0248790 0.0418447 0.04631980 0.0385289 0.0341922 0.0223837 0.0418944 0.0193284 NA 0.0114455 0.05867772 0.02023180 0.0174919 0.03539703 0.0297125 0.0469266 0.0359639 0.0085932 0.0167513 0.0739440 0.0099216 0.0409813 0.0251500 0.0387153 0.0389445 0.0195895 0.0464879 0.0072832 0.0194585 0.10910763 0.00606317 0.1101374 0.0299436 0.0276308 0.0136024 0.0268457 0.0247401 0.0492534 7 0.0306734 0.0323344 -0.00074766 9 0.030052 0.034401 -0.00434818 0.8178340 7.7472e-01 insignificant 1.00000 1.000000 insignificant 0.639469 8.8634e-01 insignificant 1 1.000000 insignificant -0.0004698 0.96974286 insignificant 1.00000 insignificant 0.0308227 0.0344353 -0.00305789 9 0.036063 0.0465713 -0.01050841 5.3509e-02 4.7516e-01 insignificant 3.2234e-01 1.0000e+00 insignificant 2.3535e-02 7.4969e-01 inconclusive 2.1255e-01 1.0000e+00 insignificant -0.00221892 9.1474e-01 insignificant 1.0000e+00 insignificant 0.0309137 0.0294118 0.00153866 9 0.039120 0.056368 -0.0172484 9.9587e-01 9.7373e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9832e-01 9.9750e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.00606778 7.3280e-01 insignificant 1.0000e+00 insignificant 0.0324111 0.0344353 -0.0022893 9 0.041281 0.0465713 -0.0052906 1.1197e-01 6.0096e-01 insignificant 6.2907e-01 1.0000e+00 insignificant 2.1936e-01 8.8913e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0017491 9.3816e-01 insignificant 1.0000e+00 insignificant 0.032334 0.0300526 0.00265885 9 0.0344006 0.103341 -0.06894061 8.5421e-01 5.1879e-01 insignificant 1.0000e+00 1.00000000 insignificant 9.8484e-01 5.3047e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.00653758 7.4178e-01 insignificant 1.00000000 insignificant 0.0344353 0.0301432 0.00174655 9 0.0465713 0.124009 -7.7438e-02 8.9694e-01 1.9729e-02 inconclusive 1.0000e+00 1.4834e-01 insignificant 9.8876e-01 5.8036e-02 insignificant 1.0000e+00 4.7964e-01 insignificant 0.0082867 7.4548e-01 insignificant 1.0000e+00 insignificant chr17 46381250 46382250 50773 TOB1 ENSG00000141232 0.7038154 100 4 0.7494450 129 6 0.7015505 123 7 0.5857143 76 4 0.5934589 51 5 0.8607447 358 7 0.7572102 98 5 0.6384891 122 7 0.71746904 80 7 0.596634 57 4 0.7338670 249 7 0.7260582 36 4 0.7985008 118 7 0.8733333 43 5 0.7658163 57 5 0.4547619 35 4 0.708333 9 0 0.7640336 88 5 0.7662657 225 7 0.7942375 292 7 0.741974 91 6 0.6015873 39 3 0.7497329 74 6 0.7822717 92 7 0.8928571 17 2 0.7833706 176 7 0.7717687 118 7 0.5577803 67 4 0.7179566 118 6 0.8576161 169 7 0.8082072 273 7 0.680467 255 7 0.5716180 125 7 0.56747496 129 7 0.6239389 69 3 0.2666667 15 3 0.6548131 119 6 0.7090674 127 7 0.7033930 138 4 0.7084942 158 7 0.6297619 74 4 0.5325397 89 4 0.7304813 91 4 0.7258242 0.6777890 0.7275032 0.7319328 0.6913689 0.8776953 0.7080389 0.62315400 0.6911585 0.6429290 0.7367076 0.6104108 0.8263026 0.93053221 0.8433974 0.53291317 0.71555777 0.6354918 0.72967618 0.7255152 0.6910082 0.6813603 0.7655274 0.7927595 0.7935542 0.7901195 0.7206683 0.5318635 0.7909451 0.8487360 0.7776709 0.6932803 0.4551327 0.2735383 0.80342831 0.35054022 0.4306376 0.5195563 0.7072343 0.6217514 0.4426629 0.4896759 0.6816834 3 0.7574595 0.7588986 -0.00905111 7 0.754775 0.757724 -0.00294885 0.7194055 4.8762e-01 insignificant 1.00000 1.000000 insignificant 0.913182 1.0669e-01 insignificant 1 1.000000 insignificant -0.0309789 0.39475190 insignificant 1.00000 insignificant 0.7574595 0.6095890 0.14287281 6 0.754775 0.6767967 0.07797836 6.6657e-05 4.7250e-01 weaklyHypermeth 6.8017e-04 1.0000e+00 weaklyHypermeth 4.1042e-02 4.1409e-01 weaklyHypermeth 3.2750e-01 1.0000e+00 insignificant 0.14889043 6.7246e-02 insignificant 6.9326e-01 insignificant 0.7574595 0.6272727 0.12907366 4 0.754775 0.700038 0.0547368 3.4452e-04 8.8787e-01 lowCoverage 1.1484e-02 1.0000e+00 lowCoverage 4.7234e-03 6.0335e-01 lowCoverage 1.9681e-01 1.00000000 lowCoverage 0.05355290 2.4739e-01 lowCoverage 1.0000e+00 lowCoverage 0.7588986 0.6095890 0.1511426 6 0.757724 0.6767967 0.0809272 2.2599e-03 5.4422e-01 weaklyHypermeth 1.9152e-02 1.0000e+00 weaklyHypermeth 4.4289e-02 6.8470e-01 weaklyHypermeth 3.4601e-01 1.0000e+00 insignificant 0.1798693 3.5983e-02 weaklyHypermeth 3.8692e-01 insignificant 0.758899 0.6272727 0.14010123 4 0.7577240 0.700038 0.05768569 2.9831e-05 7.7912e-01 lowCoverage 1.1933e-03 1.00000000 lowCoverage 1.6755e-03 6.7613e-01 lowCoverage 7.9379e-02 1.0000000 lowCoverage 0.08453176 9.7971e-02 lowCoverage 1.00000000 lowCoverage 0.6095890 0.6272727 -0.06070600 4 0.6767967 0.700038 -2.3242e-02 6.0352e-01 2.3938e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.1422e-01 2.8951e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0953375 2.3028e-01 lowCoverage 1.0000e+00 lowCoverage chr17 46381550 46382550 50774 TOB1 ENSG00000141232 0.7038154 100 4 0.7494450 129 6 0.7015505 123 7 0.5857143 76 4 0.5934589 51 5 0.8607447 358 7 0.7572102 98 5 0.6384891 122 7 0.71746904 80 7 0.596634 57 4 0.7338670 249 7 0.7260582 36 4 0.7985008 118 7 0.8733333 43 5 0.7658163 57 5 0.4547619 35 4 0.708333 9 0 0.7640336 88 5 0.7662657 225 7 0.7942375 292 7 0.741974 91 6 0.6015873 39 3 0.7497329 74 6 0.7822717 92 7 0.8928571 17 2 0.7833706 176 7 0.7717687 118 7 0.5577803 67 4 0.7179566 118 6 0.8576161 169 7 0.8082072 273 7 0.680467 255 7 0.5716180 125 7 0.56747496 129 7 0.6239389 69 3 0.2666667 15 3 0.6548131 119 6 0.7090674 127 7 0.7033930 138 4 0.7084942 158 7 0.6297619 74 4 0.5325397 89 4 0.7304813 91 4 0.7258242 0.6777890 0.7275032 0.7319328 0.6913689 0.8776953 0.7080389 0.62315400 0.6911585 0.6429290 0.7367076 0.6104108 0.8263026 0.93053221 0.8433974 0.53291317 0.71555777 0.6354918 0.72967618 0.7255152 0.6910082 0.6813603 0.7655274 0.7927595 0.7935542 0.7901195 0.7206683 0.5318635 0.7909451 0.8487360 0.7776709 0.6932803 0.4551327 0.2735383 0.80342831 0.35054022 0.4306376 0.5195563 0.7072343 0.6217514 0.4426629 0.4896759 0.6816834 3 0.7574595 0.7588986 -0.00905111 7 0.754775 0.757724 -0.00294885 0.7194055 4.8762e-01 insignificant 1.00000 1.000000 insignificant 0.913182 1.0669e-01 insignificant 1 1.000000 insignificant -0.0309789 0.39475190 insignificant 1.00000 insignificant 0.7574595 0.6095890 0.14287281 6 0.754775 0.6767967 0.07797836 6.6657e-05 4.7250e-01 weaklyHypermeth 6.8017e-04 1.0000e+00 weaklyHypermeth 4.1042e-02 4.1409e-01 weaklyHypermeth 3.2750e-01 1.0000e+00 insignificant 0.14889043 6.7246e-02 insignificant 6.9326e-01 insignificant 0.7574595 0.6272727 0.12907366 4 0.754775 0.700038 0.0547368 3.4452e-04 8.8787e-01 lowCoverage 1.1484e-02 1.0000e+00 lowCoverage 4.7234e-03 6.0335e-01 lowCoverage 1.9681e-01 1.00000000 lowCoverage 0.05355290 2.4739e-01 lowCoverage 1.0000e+00 lowCoverage 0.7588986 0.6095890 0.1511426 6 0.757724 0.6767967 0.0809272 2.2599e-03 5.4422e-01 weaklyHypermeth 1.9152e-02 1.0000e+00 weaklyHypermeth 4.4289e-02 6.8470e-01 weaklyHypermeth 3.4601e-01 1.0000e+00 insignificant 0.1798693 3.5983e-02 weaklyHypermeth 3.8692e-01 insignificant 0.758899 0.6272727 0.14010123 4 0.7577240 0.700038 0.05768569 2.9831e-05 7.7912e-01 lowCoverage 1.1933e-03 1.00000000 lowCoverage 1.6755e-03 6.7613e-01 lowCoverage 7.9379e-02 1.0000000 lowCoverage 0.08453176 9.7971e-02 lowCoverage 1.00000000 lowCoverage 0.6095890 0.6272727 -0.06070600 4 0.6767967 0.700038 -2.3242e-02 6.0352e-01 2.3938e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.1422e-01 2.8951e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0953375 2.3028e-01 lowCoverage 1.0000e+00 lowCoverage chr17 50778150 50779150 50798 ENSG00000204772 0.8173873 356 5 0.7926667 104 5 0.7629073 80 4 0.8535942 105 5 0.8164336 49 4 0.8675287 297 5 0.7750000 35 4 0.7991980 170 5 0.82397059 78 5 0.840833 64 4 0.7891292 197 5 0.7000000 20 1 0.7790466 240 5 NA 0 0 0.8833333 58 5 0.7500000 4 0 0.400000 58 4 0.8167484 174 5 0.7624706 218 5 0.6891594 112 5 0.857143 39 5 0.7753509 100 5 0.7648715 106 5 0.8909524 86 5 0.8112069 61 5 0.8262425 464 5 0.7278846 76 5 0.7700000 20 2 0.8436142 210 5 0.8165561 226 5 0.8461453 390 5 0.804902 363 5 0.6718089 168 5 0.45552826 156 5 0.6000000 48 5 0.8166667 33 5 0.6883333 39 4 0.7489301 345 5 0.8067554 270 5 0.8459069 233 5 0.6911808 244 5 0.8778526 207 5 0.8808035 295 5 0.7952784 0.7645797 0.7299117 0.8341500 0.7918212 0.8605245 0.7445652 0.80736489 0.8288363 0.8195290 0.7769673 0.8000000 0.7718895 NA 0.8681159 0.74947854 0.45652174 0.8179668 0.76593009 0.6473268 0.8385093 0.7638120 0.7598943 0.8855694 0.7961769 0.8267075 0.6907609 0.7400000 0.8353721 0.8027098 0.8345099 0.7912160 0.6412581 0.4261867 0.53913043 0.82753623 0.6468116 0.7344451 0.7872839 0.8298146 0.6612738 0.8735944 0.8774289 4 0.7891691 0.8187763 -0.02646934 5 0.796737 0.821910 -0.02517346 0.9663739 3.1394e-02 weaklyHypometh 1.00000 0.987983 insignificant 0.893459 2.6486e-01 insignificant 1 1.000000 insignificant -0.0365334 0.19136716 lowCoverage 1.00000 lowCoverage 0.7891691 0.6603295 0.13236773 5 0.796737 0.6731397 0.12359695 2.2429e-06 9.9980e-01 weaklyHypermeth 2.8036e-05 1.0000e+00 weaklyHypermeth 3.6412e-03 9.9962e-01 weaklyHypermeth 4.2340e-02 1.0000e+00 weaklyHypermeth 0.11116110 8.8109e-02 lowCoverage 8.1583e-01 lowCoverage 0.7891691 0.8142514 -0.01741550 5 0.796737 0.815669 -0.0189318 8.9222e-01 4.6103e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.6623e-01 5.6473e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.04579420 3.1018e-01 lowCoverage 1.0000e+00 lowCoverage 0.8187763 0.6603295 0.1584729 5 0.821910 0.6731397 0.1487704 6.9332e-08 9.9999e-01 weaklyHypermeth 1.2381e-06 1.0000e+00 weaklyHypermeth 9.8832e-04 9.9998e-01 weaklyHypermeth 1.4323e-02 1.0000e+00 weaklyHypermeth 0.1476945 3.3426e-02 lowCoverage 3.7571e-01 lowCoverage 0.818776 0.8142514 0.00902051 5 0.8219101 0.815669 0.00624164 3.2203e-01 5.8973e-01 insignificant 1.0000e+00 1.00000000 insignificant 6.9921e-01 6.7870e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.00926075 8.1397e-01 lowCoverage 1.00000000 lowCoverage 0.6603295 0.8142514 -0.14941095 5 0.6731397 0.815669 -1.4253e-01 9.9995e-01 1.5004e-03 weaklyHypometh 1.0000e+00 1.9486e-02 weaklyHypometh 9.9985e-01 1.9570e-02 weaklyHypometh 1.0000e+00 2.1271e-01 insignificant -0.1569553 3.3785e-02 lowCoverage 3.9747e-01 lowCoverage chr17 52131350 52132350 50837 NOG ENSG00000183691 0.7176715 532 9 0.3210502 676 14 0.3267127 421 14 0.6110144 535 13 0.3800840 273 14 0.5710478 970 12 0.3540013 433 14 0.4508075 426 14 0.29568171 506 14 0.550572 320 11 0.5168813 512 14 0.3309099 295 14 0.2786273 535 11 0.3957518 177 10 0.4362966 417 14 0.2926446 170 9 0.349925 317 10 0.2628509 606 9 0.2588963 504 10 0.4356777 889 14 0.433036 145 9 0.2851749 253 12 0.4946880 381 14 0.5624934 178 9 0.2585321 231 10 0.3485144 690 14 0.3450487 307 14 0.2630081 191 14 0.3849240 464 13 0.3217154 736 14 0.4706629 939 14 0.546077 602 13 0.0385553 593 14 0.02609525 369 14 0.0371899 507 11 0.0400000 66 7 0.0387324 410 14 0.0158890 634 14 0.4234675 696 12 0.3807932 609 12 0.2426707 546 7 0.3395417 474 7 0.3253769 581 13 0.5957597 0.3556456 0.3603849 0.5800446 0.4534086 0.5675921 0.3698970 0.46933510 0.3580845 0.5394933 0.5837850 0.3620421 0.1956469 0.47063979 0.4050298 0.18599727 0.36077368 0.3031044 0.29962818 0.4564426 0.5605984 0.2815373 0.5841731 0.4934647 0.3630179 0.4230959 0.3725618 0.2640999 0.5211474 0.3591394 0.4837823 0.5974547 0.0562433 0.0350798 0.01638890 0.03859332 0.0629822 0.0098252 0.4451914 0.3641758 0.3777242 0.2739787 0.3544420 6 0.4433933 0.4467253 -0.02385466 14 0.445471 0.366916 0.07855575 0.2790463 7.8313e-01 insignificant 1.00000 1.000000 insignificant 0.533261 7.9611e-01 insignificant 1 1.000000 insignificant 0.0140324 0.74191875 insignificant 1.00000 insignificant 0.4432881 0.0325708 0.41123686 14 0.378805 0.0325171 0.34628757 4.8948e-49 1.0000e+00 hypermethylated 1.6316e-46 1.0000e+00 hypermethylated 7.2306e-29 1.0000e+00 hypermethylated 7.2306e-26 1.0000e+00 hypermethylated 0.37411157 4.4656e-11 hypermethylated 5.5821e-09 hypermethylated 0.4433347 0.3730213 0.06279417 12 0.405862 0.357236 0.0486257 5.7561e-03 9.3101e-01 weaklyHypermeth 1.3705e-01 1.0000e+00 insignificant 3.3699e-02 9.0783e-01 weaklyHypermeth 7.8369e-01 1.00000000 insignificant 0.06448520 1.4707e-01 insignificant 1.0000e+00 insignificant 0.4469875 0.0325834 0.4174655 14 0.393124 0.0348397 0.3582841 2.3669e-46 1.0000e+00 hypermethylated 7.8898e-44 1.0000e+00 hypermethylated 1.6855e-24 1.0000e+00 hypermethylated 1.6855e-21 1.0000e+00 hypermethylated 0.3600792 1.2640e-07 hypermethylated 9.7235e-06 hypermethylated 0.446987 0.3730213 0.09275126 12 0.3931238 0.357236 0.03588739 4.6287e-03 8.0273e-01 weaklyHypermeth 1.1766e-01 1.00000000 insignificant 6.4054e-03 9.3937e-01 weaklyHypermeth 2.2088e-01 1.0000000 insignificant 0.05045285 2.6607e-01 insignificant 1.00000000 insignificant 0.0325834 0.3730213 -0.32685762 12 0.0348397 0.357236 -3.2240e-01 1.0000e+00 2.4813e-29 hypomethylated 1.0000e+00 2.4813e-26 hypomethylated 1.0000e+00 4.9095e-13 hypomethylated 1.0000e+00 4.9095e-10 hypomethylated -0.3096264 4.4594e-04 hypomethylated 2.1235e-02 hypomethylated chr17 52212050 52213050 50839 NOG ENSG00000183691 0.1075949 766 23 0.1482249 802 22 0.1829817 1057 25 0.0698787 548 21 0.1001428 314 14 0.1776389 1460 26 0.1330424 484 17 0.0752335 475 17 0.12477871 499 18 0.063615 411 16 0.1690494 537 17 0.1835228 379 16 0.1193033 505 16 0.0792125 130 7 0.1474707 519 16 0.1236235 310 16 0.023779 431 11 0.0859362 585 23 0.0962925 466 16 0.1526617 1214 23 0.055357 145 12 0.0773730 376 16 0.1649197 577 22 0.1387302 227 17 0.2131983 257 13 0.1041281 891 25 0.1633443 507 18 0.1766652 235 16 0.0877310 326 16 0.0976714 910 22 0.0913707 1309 26 0.147989 936 18 0.0369815 666 24 0.00810450 295 13 0.0386473 306 12 0.0039526 156 11 0.0528890 339 14 0.0303030 536 22 0.0359751 823 21 0.0775678 761 18 0.0234951 552 17 0.1206810 696 16 0.0513611 756 23 0.1198317 0.0844736 0.1121135 0.0993834 0.0741078 0.1486146 0.1244705 0.10417820 0.0947229 0.0807801 0.1393888 0.0995164 0.0163902 0.08270641 0.1029151 0.13634362 0.02635342 0.0695773 0.05124607 0.0851460 0.0931103 0.0283536 0.0991281 0.0632804 0.0720549 0.0741993 0.0542765 0.0792323 0.0837557 0.0663941 0.0552061 0.1277952 0.0243407 0.0076780 0.03168101 0.00615145 0.0290404 0.0059163 0.0364656 0.0640847 0.0191548 0.0300076 0.0503362 13 0.1025145 0.0899178 0.01773961 22 0.164390 0.134379 0.03001102 0.1335141 9.6504e-01 insignificant 1.00000 1.000000 insignificant 0.117221 9.5484e-01 insignificant 1 1.000000 insignificant -0.0083407 0.62791745 insignificant 1.00000 insignificant 0.1024563 0.0391645 0.07586044 22 0.142016 0.0544750 0.08754123 1.1676e-16 9.2153e-01 weaklyHypermeth 3.1558e-15 1.0000e+00 weaklyHypermeth 5.0670e-14 9.9997e-01 weaklyHypermeth 5.8351e-12 1.0000e+00 weaklyHypermeth 0.08971949 5.7242e-07 weaklyHypermeth 3.0127e-05 weaklyHypermeth 0.0993815 0.0373884 0.05446116 18 0.086796 0.043945 0.0428512 1.0953e-07 9.9969e-01 weaklyHypermeth 1.3691e-05 1.0000e+00 weaklyHypermeth 2.6715e-05 9.9920e-01 weaklyHypermeth 2.6715e-03 1.00000000 weaklyHypermeth 0.05638311 2.5637e-02 weaklyHypermeth 5.8266e-01 insignificant 0.0897129 0.0391645 0.0562328 22 0.132227 0.0544750 0.0777517 6.3681e-11 1.0000e+00 weaklyHypermeth 1.4473e-09 1.0000e+00 weaklyHypermeth 6.3486e-08 1.0000e+00 weaklyHypermeth 2.2674e-06 1.0000e+00 weaklyHypermeth 0.0980602 1.3922e-05 weaklyHypermeth 6.3282e-04 weaklyHypermeth 0.085585 0.0373884 0.04111784 17 0.0723917 0.043945 0.02844679 8.8099e-05 1.0000e+00 weaklyHypermeth 3.3884e-03 1.00000000 weaklyHypermeth 7.0424e-02 9.9872e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.06472378 1.6095e-02 weaklyHypermeth 0.73159591 insignificant 0.0379356 0.0373884 -0.01229205 17 0.0384967 0.043945 -5.4482e-03 9.6935e-01 1.4639e-05 weaklyHypometh 1.0000e+00 2.7110e-04 weaklyHypometh 9.9999e-01 1.4001e-03 weaklyHypometh 1.0000e+00 2.5002e-02 weaklyHypometh -0.0333364 1.3208e-01 insignificant 1.0000e+00 insignificant chr17 52416350 52417350 50845 SCPEP1 ENSG00000121064 0.8288005 160 6 0.7157769 153 7 0.7097975 95 8 0.8080247 133 9 0.7518519 86 7 0.7966678 300 9 0.7463264 130 9 0.7843630 161 6 0.66789322 86 5 0.582143 55 6 0.7654226 215 9 0.6296296 31 2 0.6906810 90 6 0.8412698 77 6 0.7389456 93 6 0.7611111 33 3 0.750000 10 0 0.7206666 180 7 0.8047619 172 6 0.7210463 251 7 0.665818 61 3 0.9069444 43 5 0.7615741 143 7 0.7422840 84 6 0.7151361 55 5 0.7800977 167 9 0.8468615 73 4 0.5500000 47 2 0.7960993 123 7 0.7971934 132 7 0.6472287 187 7 0.837014 243 6 0.6312500 114 7 0.78701299 83 7 0.7246753 61 5 0.4666667 14 0 0.7328829 131 8 0.6221656 150 6 0.8212579 162 7 0.7920361 157 7 0.8060185 105 7 0.7708333 74 5 0.7976012 191 9 0.8927367 0.7494695 0.7770346 0.9141236 0.7718310 0.8544618 0.8210366 0.86997505 0.7282193 0.7807847 0.8029430 0.7810555 0.8011559 0.91649899 0.8431590 0.85281690 0.69721460 0.8857464 0.92347418 0.8684513 0.7591549 0.8564945 0.7870599 0.7774844 0.8645205 0.8816953 0.8902163 0.6919014 0.8508466 0.8644937 0.8144982 0.8999709 0.7422032 0.8979513 0.84595991 0.75464536 0.8437857 0.7861535 0.8600661 0.9134369 0.8836854 0.9209214 0.8819862 2 0.8542413 0.8593520 -0.00189697 6 0.729202 0.704197 0.02500483 0.6153486 7.5972e-01 insignificant 1.00000 1.000000 insignificant 0.887519 8.0658e-01 insignificant 1 1.000000 insignificant -0.0130953 0.68587129 insignificant 1.00000 insignificant 0.8552054 0.7830018 0.03218767 6 0.782446 0.7149197 0.06752650 1.1371e-03 9.9293e-01 weaklyHypermeth 9.6533e-03 1.0000e+00 weaklyHypermeth 8.9636e-02 9.5242e-01 insignificant 6.3572e-01 1.0000e+00 insignificant 0.07998339 1.5268e-01 insignificant 1.0000e+00 insignificant 0.8542413 0.8534107 -0.03907512 6 0.729202 0.826661 -0.0974590 8.1853e-01 8.1645e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8803e-01 3.7769e-02 weaklyHypometh 1.0000e+00 0.82107243 insignificant -0.05679045 2.6091e-03 weaklyHypometh 1.4495e-01 insignificant 0.8599853 0.7830018 0.0354131 6 0.782441 0.7149197 0.0675211 5.5278e-03 9.0643e-01 weaklyHypermeth 4.2521e-02 1.0000e+00 weaklyHypermeth 1.1504e-01 9.5115e-01 insignificant 7.8795e-01 1.0000e+00 insignificant 0.0930787 1.2287e-01 insignificant 9.1693e-01 insignificant 0.859352 0.8534107 -0.03720164 6 0.7041968 0.826661 -0.12246387 9.9013e-01 2.2941e-01 insignificant 1.0000e+00 1.00000000 insignificant 9.9398e-01 1.4955e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.04369514 1.6281e-01 insignificant 1.00000000 insignificant 0.7830018 0.8531977 -0.07163384 7 0.7149197 0.807401 -9.2481e-02 9.9991e-01 1.8657e-03 weaklyHypometh 1.0000e+00 2.3920e-02 weaklyHypometh 1.0000e+00 1.4820e-02 weaklyHypometh 1.0000e+00 1.7034e-01 insignificant -0.1367738 3.1943e-02 weaklyHypometh 3.9560e-01 insignificant chr17 52418150 52419150 50846 SCPEP1 ENSG00000121064 0.7247019 294 14 0.5516192 355 14 0.6713866 174 14 0.7468195 298 14 0.6330491 201 14 0.7189472 459 16 0.5727149 239 14 0.7223891 230 14 0.58104816 183 14 0.646016 112 12 0.7187143 552 15 0.7000397 105 7 0.7391339 293 14 0.6507943 184 14 0.6912078 194 12 0.7667779 104 9 0.774551 570 7 0.6993047 291 14 0.7604007 232 10 0.6901534 403 13 0.771740 146 12 0.7364021 110 6 0.6695282 193 15 0.6899356 142 12 0.6958612 200 14 0.7196313 361 14 0.6707768 196 10 0.5894940 98 6 0.6616356 248 14 0.7329503 298 14 0.8203354 292 14 0.749948 330 14 0.6845433 344 14 0.62273668 197 14 0.6674143 321 12 0.6539948 107 10 0.6199417 240 14 0.7074408 299 14 0.7554397 260 14 0.7952187 340 14 0.6799271 263 14 0.6676688 200 10 0.7678817 330 14 0.7908742 0.6582832 0.6518952 0.7590867 0.6774360 0.7392416 0.6327887 0.74913173 0.6347350 0.6939846 0.7510577 0.6129208 0.7512015 0.71290516 0.6972476 0.80665297 0.73869478 0.7346668 0.77787715 0.7186304 0.7361206 0.6640851 0.7337065 0.6645396 0.7736461 0.7393401 0.7223072 0.6214720 0.7381698 0.7176859 0.8151455 0.7375773 0.6626839 0.6330864 0.72625884 0.65242223 0.6634597 0.7009265 0.7694452 0.7619493 0.6663098 0.7124628 0.7734211 8 0.7014625 0.7345065 -0.01302149 14 0.663160 0.729052 -0.06589198 0.9557545 1.3469e-01 insignificant 1.00000 1.000000 insignificant 0.989800 2.2244e-01 insignificant 1 1.000000 insignificant -0.0210314 0.36008206 insignificant 1.00000 insignificant 0.7014461 0.6717507 0.04125671 14 0.693972 0.6715303 0.02244157 9.3653e-03 9.1657e-01 weaklyHypermeth 6.4588e-02 1.0000e+00 weaklyHypermeth 1.9229e-02 9.7036e-01 weaklyHypermeth 1.8313e-01 1.0000e+00 insignificant 0.02864321 1.7447e-01 insignificant 1.0000e+00 insignificant 0.7014461 0.7473080 -0.03806046 14 0.693972 0.772728 -0.0787565 9.8668e-01 1.2848e-02 weaklyHypometh 1.0000e+00 3.4833e-01 insignificant 9.8252e-01 6.7358e-02 insignificant 1.0000e+00 1.00000000 insignificant -0.04523872 1.6368e-01 insignificant 1.0000e+00 insignificant 0.7344828 0.6717507 0.0535823 14 0.716017 0.6715303 0.0444867 3.0019e-03 9.9223e-01 weaklyHypermeth 2.4809e-02 1.0000e+00 weaklyHypermeth 2.3743e-03 9.9603e-01 weaklyHypermeth 2.8024e-02 1.0000e+00 weaklyHypermeth 0.0496746 4.1131e-02 weaklyHypermeth 4.3295e-01 insignificant 0.734483 0.7473080 -0.02650262 14 0.7160171 0.772728 -0.05671130 9.8275e-01 1.1083e-01 insignificant 1.0000e+00 1.00000000 insignificant 9.5668e-01 4.1750e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.02420732 4.5092e-01 insignificant 1.00000000 insignificant 0.6717507 0.7473080 -0.07802913 14 0.6715303 0.772728 -1.0120e-01 9.9979e-01 8.8090e-05 weaklyHypometh 1.0000e+00 1.3764e-03 weaklyHypometh 9.9994e-01 1.9902e-03 weaklyHypometh 1.0000e+00 3.3732e-02 weaklyHypometh -0.0738819 4.0496e-02 weaklyHypometh 4.6019e-01 insignificant chr17 52838450 52839450 50866 ENSG00000197862 0.6384357 534 14 0.7081805 412 14 0.6756557 433 14 0.6405102 494 14 0.6150882 140 11 0.5952494 1158 14 0.7802780 231 12 0.6957823 306 12 0.75725107 264 12 0.586574 203 11 0.7620780 427 12 0.7644120 121 7 0.5435324 207 12 0.5998608 96 8 0.6111239 223 11 0.8347902 78 7 0.606088 590 9 0.5570369 728 12 0.6523918 551 11 0.5511712 784 14 0.785385 110 8 0.2426941 313 12 0.6700527 330 14 0.6449412 192 11 0.6693373 567 9 0.6681911 514 14 0.6586069 248 8 0.7144064 172 12 0.5984736 254 12 0.5806981 615 14 0.6862249 848 14 0.789797 620 12 0.6471069 399 14 0.75879121 216 10 0.6622767 464 12 0.6057598 181 5 0.6931805 335 12 0.7467332 543 14 0.2069211 578 11 0.2908103 412 14 0.1822082 526 10 0.2704546 423 10 0.3143894 532 11 0.5509990 0.7009119 0.6388605 0.5957118 0.5540037 0.5992446 0.7549629 0.65389243 0.7245396 0.6575582 0.7392328 0.7672435 0.5547905 0.70980095 0.5905534 0.75263787 0.71568129 0.4838142 0.58474445 0.4883837 0.8255082 0.2080095 0.6627423 0.6636470 0.6470938 0.6187158 0.6076766 0.6729307 0.5601143 0.5885755 0.6395605 0.7725221 0.6623265 0.8085114 0.80180870 0.60669373 0.7486754 0.7739705 0.1499844 0.2760051 0.1683849 0.2899104 0.2075395 6 0.6526316 0.6478461 -0.00800745 14 0.657488 0.706492 -0.04900358 0.9827598 1.1617e-01 insignificant 1.00000 1.000000 insignificant 0.976454 3.8699e-01 insignificant 1 1.000000 insignificant 0.0163739 0.71949908 insignificant 1.00000 insignificant 0.6525392 0.7408793 -0.11506216 14 0.644272 0.7090711 -0.06479890 3.0756e-01 2.1828e-08 weaklyHypometh 1.0000e+00 2.2693e-06 weaklyHypometh 8.4430e-01 7.0258e-05 weaklyHypometh 1.0000e+00 8.7822e-03 weaklyHypometh -0.02686687 3.9963e-01 insignificant 1.0000e+00 insignificant 0.6525009 0.1983003 0.44655759 11 0.634654 0.236747 0.3979068 3.9608e-50 1.0000e+00 hypermethylated 3.9608e-47 1.0000e+00 hypermethylated 4.8802e-22 9.9999e-01 hypermethylated 4.8802e-19 1.00000000 hypermethylated 0.40581780 3.2788e-07 hypermethylated 1.6394e-04 hypermethylated 0.6470342 0.7408793 -0.1014681 14 0.664562 0.7090711 -0.0445091 4.6172e-01 9.9587e-06 weaklyHypometh 1.0000e+00 1.1065e-03 weaklyHypometh 8.6732e-01 8.0242e-04 weaklyHypometh 1.0000e+00 1.1463e-01 insignificant -0.0432407 3.7365e-01 insignificant 1.0000e+00 insignificant 0.647625 0.1983003 0.45446487 11 0.6869246 0.236747 0.45017730 2.1988e-37 1.0000e+00 hypermethylated 2.1988e-34 1.00000000 hypermethylated 1.5460e-16 1.0000e+00 hypermethylated 1.5460e-13 1.0000000 hypermethylated 0.38944394 6.7621e-07 hypermethylated 0.00033810 hypermethylated 0.7408793 0.1983806 0.57951463 11 0.7090711 0.253658 4.5541e-01 2.8764e-27 1.0000e+00 hypermethylated 2.8764e-24 1.0000e+00 hypermethylated 9.0444e-13 1.0000e+00 hypermethylated 9.0444e-10 1.0000e+00 hypermethylated 0.4326847 7.1322e-07 hypermethylated 3.5661e-04 hypermethylated chr17 52873650 52874650 50870 ENSG00000197862 0.6476632 213 6 0.5751174 166 6 0.5450292 74 6 0.6522727 112 6 0.6791667 73 6 0.5516740 196 6 0.6154111 96 6 0.5703870 111 6 0.60147417 96 6 0.604502 108 6 0.6767094 156 6 0.6130952 63 6 0.6313414 97 6 NA 0 0 0.6611668 111 6 0.6458333 32 2 0.601735 85 6 0.6192810 104 6 0.6245440 120 6 0.6764165 220 6 0.504630 33 2 0.6134921 47 6 0.5390834 118 6 0.5148810 36 4 0.6152778 33 4 0.5909803 164 6 0.7326720 34 4 0.7047619 41 6 0.6398428 87 6 0.6923370 152 6 0.5345238 168 6 0.634850 269 6 0.5314186 100 6 0.54932660 99 6 0.5931373 109 6 0.5912490 62 6 0.7194444 52 6 0.6570216 169 6 0.6789958 173 6 0.6630435 205 6 0.6186282 147 6 0.6752584 223 6 0.5948019 203 6 0.6969499 0.6133082 0.5689154 0.6951783 0.7345764 0.6163643 0.6644245 0.60318906 0.6341663 0.6547817 0.7094348 0.6492370 0.6747863 NA 0.7069331 0.67541436 0.62483438 0.6546600 0.66352445 0.7129563 0.5690608 0.6800316 0.5758397 0.5718232 0.6537753 0.6296230 0.6995703 0.7707972 0.6922925 0.7308027 0.5754451 0.6795331 0.5756015 0.5871979 0.62495938 0.63486973 0.7513812 0.6785168 0.7283560 0.7007867 0.6552874 0.7164936 0.6255845 4 0.6314375 0.6362098 0.00984802 6 0.620541 0.608606 0.01193470 0.5147397 8.7259e-01 insignificant 1.00000 1.000000 insignificant 0.520393 8.4594e-01 insignificant 1 1.000000 insignificant 0.0108971 0.65441870 insignificant 1.00000 insignificant 0.6314375 0.6209814 0.02336346 6 0.620541 0.6016130 0.01892798 2.5537e-02 8.1426e-01 weaklyHypermeth 1.6265e-01 1.0000e+00 insignificant 1.1116e-01 9.3950e-01 insignificant 7.5938e-01 1.0000e+00 insignificant 0.01374181 6.6421e-01 insignificant 1.0000e+00 insignificant 0.6314375 0.6382755 -0.02469184 6 0.620541 0.645480 -0.0249386 9.4937e-01 1.5623e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4590e-01 2.6559e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.02547085 2.2736e-01 insignificant 1.0000e+00 insignificant 0.6362098 0.6209814 0.0143490 6 0.608606 0.6016130 0.0069933 1.4420e-01 6.7645e-01 insignificant 7.8796e-01 1.0000e+00 insignificant 3.9476e-01 8.1000e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0028448 9.3861e-01 insignificant 1.0000e+00 insignificant 0.636210 0.6382755 -0.03145950 6 0.6086063 0.645480 -0.03687330 9.4745e-01 2.2604e-01 insignificant 1.0000e+00 1.00000000 insignificant 9.5156e-01 3.5731e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.03636791 2.0848e-01 insignificant 1.00000000 insignificant 0.6209814 0.6382755 -0.04574172 6 0.6016130 0.645480 -4.3867e-02 9.4113e-01 2.6853e-02 weaklyHypometh 1.0000e+00 1.9459e-01 insignificant 9.9611e-01 8.0967e-02 insignificant 1.0000e+00 6.2765e-01 insignificant -0.0392127 2.7187e-01 insignificant 1.0000e+00 insignificant chr17 52985950 52986950 50882 ENSG00000197862 0.7681694 145 3 0.6917984 75 3 0.6706926 80 5 0.8250000 77 3 0.6666667 14 0 0.6698816 215 5 0.8057971 74 5 0.7439683 79 5 0.70334928 77 5 0.693436 84 4 0.7975219 116 5 0.6341667 51 3 0.4283527 93 5 NA 0 0 0.8181818 66 3 0.9333333 11 1 0.485495 53 5 0.5982955 101 3 0.8090909 33 3 0.6325222 181 5 0.663333 24 3 0.2531579 73 5 0.7486157 143 4 0.7535948 65 4 0.8511111 31 3 0.6521505 107 5 0.8339286 46 5 0.6000000 22 2 0.4337607 31 3 0.6539586 155 4 0.5798319 116 5 0.776486 196 5 0.7502381 91 5 0.72663818 88 3 0.7155242 173 5 0.8684211 49 3 0.7383838 52 5 0.8175584 80 4 0.1787125 193 3 0.2256397 184 3 0.1456025 134 3 0.0901146 206 3 0.1115150 156 3 0.7826885 0.5802010 0.6477115 0.7127832 0.5196480 0.6427603 0.7760940 0.74793497 0.7573930 0.7539457 0.7739759 0.5273867 0.3142950 NA 0.8065265 0.89699426 0.46179452 0.3600508 0.67519859 0.5766657 0.8258900 0.2616249 0.6582535 0.7506504 0.7741100 0.5180342 0.7840095 0.7313916 0.4502635 0.5001440 0.4559435 0.7704517 0.6815187 0.6133170 0.54322933 0.90674502 0.6638717 0.8243853 0.1104845 0.1903710 0.2182208 0.1276690 0.1563410 2 0.6627692 0.6313181 0.03102465 5 0.673670 0.652097 0.02157352 0.3936400 8.4972e-01 insignificant 1.00000 1.000000 insignificant 0.323291 9.3840e-01 insignificant 1 1.000000 insignificant 0.0539911 0.35388554 lowCoverage 1.00000 lowCoverage 0.6627692 0.7542214 -0.07599613 5 0.673670 0.7630561 -0.08938571 9.7211e-01 2.3253e-03 weaklyHypometh 1.0000e+00 1.5502e-01 insignificant 9.4390e-01 5.1709e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.06547544 9.5190e-02 lowCoverage 8.4553e-01 lowCoverage 0.6627692 0.1752577 0.48708604 3 0.673670 0.158745 0.5149257 1.2325e-23 1.0000e+00 lowCoverage 4.1084e-21 1.0000e+00 lowCoverage 9.0805e-12 1.0000e+00 lowCoverage 3.0268e-09 1.00000000 lowCoverage 0.55366834 1.0677e-10 lowCoverage 1.0677e-07 lowCoverage 0.6313181 0.7542214 -0.1065438 5 0.652097 0.7630561 -0.1109592 9.8184e-01 1.7759e-02 weaklyHypometh 1.0000e+00 8.4569e-01 insignificant 9.5943e-01 4.0842e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.1194666 4.6979e-02 lowCoverage 4.7938e-01 lowCoverage 0.631318 0.1752577 0.45283198 3 0.6520968 0.158745 0.49335217 8.5184e-16 1.0000e+00 lowCoverage 4.2592e-13 1.00000000 lowCoverage 3.3572e-10 1.0000e+00 lowCoverage 1.6786e-07 1.0000000 lowCoverage 0.49967721 2.1809e-07 lowCoverage 0.00021809 lowCoverage 0.7542214 0.1752577 0.56262706 3 0.7630561 0.158745 6.0431e-01 1.7855e-15 1.0000e+00 lowCoverage 8.9276e-13 1.0000e+00 lowCoverage 1.8245e-07 1.0000e+00 lowCoverage 6.0818e-05 1.0000e+00 lowCoverage 0.6191438 2.5830e-08 lowCoverage 2.5830e-05 lowCoverage chr17 55279650 55280650 50940 ENSG00000201524 0.7469066 118 8 0.6482143 101 8 0.4416667 43 5 0.6784988 126 8 0.7396206 110 5 0.6950893 55 5 0.5550505 84 8 0.7458974 106 8 0.57386364 49 3 0.735308 62 8 0.6960403 177 8 0.7569444 39 3 0.7700185 124 8 0.6347222 80 8 0.7467320 96 8 0.6028571 42 5 0.826169 154 3 0.7501359 114 7 0.6654304 51 5 0.7368421 50 2 0.625000 27 0 0.7583333 22 1 0.6100983 114 6 0.6508929 47 7 0.6888709 76 8 0.6264550 94 8 0.6350000 34 4 0.8518519 26 2 0.8043831 98 8 0.7604167 72 5 0.5552312 58 5 0.644762 38 2 0.6723007 138 8 0.76488095 64 8 0.7197917 102 5 0.6000000 15 0 0.4890332 79 7 0.5729167 78 8 0.6532040 114 8 0.7667462 126 8 0.7708333 125 8 0.7488095 54 5 0.6432234 125 8 0.7567612 0.6497696 0.4408602 0.7012888 0.7285427 0.6965906 0.6032910 0.83209264 0.5953079 0.7828865 0.7112263 0.7831541 0.7379331 0.71236559 0.8022349 0.77880184 0.75597365 0.7679173 0.60700697 0.7165094 0.8064516 0.7573869 0.7372554 0.6656682 0.7305078 0.6522273 0.5887097 0.8172043 0.8213238 0.7392473 0.5164097 0.6594519 0.6739364 0.7772657 0.74650538 0.66075269 0.5393800 0.5779570 0.7643284 0.8063588 0.8107527 0.7726575 0.6889992 0 0.7203818 0.7177305 -0.01067073 8 0.641201 0.562912 0.07828858 0.5294545 5.5980e-01 insignificant 1.00000 1.000000 insignificant 0.789341 6.7434e-01 insignificant 1 1.000000 insignificant 0.0030258 0.92728423 lowCoverage 1.00000 lowCoverage 0.7220339 0.6428571 0.06628868 8 0.738164 0.5738600 0.16430441 2.0131e-02 9.8489e-01 weaklyHypermeth 1.2988e-01 1.0000e+00 insignificant 5.4650e-02 9.9203e-01 insignificant 4.0482e-01 1.0000e+00 insignificant 0.05081321 3.0556e-01 insignificant 1.0000e+00 insignificant 0.7217833 0.7440147 -0.03451886 8 0.714348 0.690277 0.0240715 9.0658e-01 1.5171e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6414e-01 2.4740e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.02926290 4.2174e-01 insignificant 1.0000e+00 insignificant 0.7210300 0.6428571 0.0776420 8 0.708975 0.5738600 0.1351148 1.7163e-03 9.9817e-01 weaklyHypermeth 1.5602e-02 1.0000e+00 weaklyHypermeth 3.0827e-02 9.9070e-01 weaklyHypermeth 2.5268e-01 1.0000e+00 insignificant 0.0477874 3.5423e-01 lowCoverage 1.0000e+00 lowCoverage 0.719373 0.7426471 -0.01724745 8 0.6255248 0.627524 -0.00199927 7.8943e-01 1.6414e-01 insignificant 1.0000e+00 1.00000000 insignificant 9.4661e-01 2.8954e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.03228871 4.1662e-01 lowCoverage 1.00000000 lowCoverage 0.6428571 0.7453875 -0.08597689 8 0.5738600 0.766974 -1.9311e-01 9.8570e-01 1.3411e-03 weaklyHypometh 1.0000e+00 1.7645e-02 weaklyHypometh 9.9891e-01 5.3053e-02 insignificant 1.0000e+00 4.5344e-01 insignificant -0.0800761 1.4758e-01 insignificant 1.0000e+00 insignificant chr17 57633050 57634050 50965 ENSG00000207123 0.9119245 149 6 0.9011905 83 6 0.7801587 31 4 0.9555556 75 6 0.6388889 40 3 0.8476750 222 6 0.9203704 29 3 0.9912281 54 3 0.75000000 11 0 0.946581 52 5 0.8561213 84 6 0.8000000 10 0 0.9689474 63 3 NA 0 0 0.9000000 41 4 1.0000000 4 0 0.916667 11 0 0.9081890 95 6 0.8270282 146 6 0.8909277 188 6 0.929243 45 3 0.8249008 74 6 0.8900376 75 5 0.8909722 63 6 0.8791667 27 3 0.9090548 127 6 0.7255291 37 5 0.8055556 24 3 0.9062500 59 3 0.8690749 152 6 0.9407814 117 6 0.906729 213 6 0.7970779 59 6 0.59563492 67 5 0.8809062 126 6 0.6551282 40 3 0.6677249 38 5 0.7460777 151 6 0.9555556 66 5 0.8828676 122 6 0.9526198 110 6 0.8819444 77 6 0.8869600 132 6 0.9033712 0.9255291 0.7842152 0.9703704 0.6820988 0.8499393 0.8944444 0.98538012 0.8688713 0.9501425 0.8408552 0.8712063 0.9469860 NA 0.9148148 0.95160031 0.95370370 0.8984488 0.82172252 0.9002651 0.9078212 0.8770392 0.8797341 0.8889660 0.9217593 0.9342993 0.7211199 0.8611111 0.9039352 0.8807575 0.9485823 0.9216342 0.7863757 0.6446649 0.91585502 0.66875390 0.6165197 0.7281629 0.9703704 0.9050908 0.9563359 0.9112654 0.9070903 0 0.8811239 0.8904245 -0.01177510 6 0.876539 0.883345 -0.00680605 0.7402332 3.7312e-01 insignificant 1.00000 1.000000 insignificant 0.324933 8.7290e-01 insignificant 1 1.000000 insignificant 0.0064422 0.81391345 lowCoverage 1.00000 lowCoverage 0.8811239 0.7484407 0.13703571 6 0.876539 0.7494664 0.12707244 6.9373e-07 1.0000e+00 weaklyHypermeth 9.9104e-06 1.0000e+00 weaklyHypermeth 2.7412e-05 9.9988e-01 weaklyHypermeth 5.3749e-04 1.0000e+00 weaklyHypermeth 0.15579186 1.2232e-02 lowCoverage 1.7989e-01 lowCoverage 0.8811239 0.9132150 -0.04042167 6 0.876539 0.907830 -0.0312911 8.9960e-01 3.6698e-02 weaklyHypometh 1.0000e+00 7.1580e-01 insignificant 6.5494e-01 2.1280e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.03243934 2.4527e-01 lowCoverage 1.0000e+00 lowCoverage 0.8904245 0.7484407 0.1408414 6 0.883345 0.7494664 0.1338785 3.8124e-06 9.9995e-01 weaklyHypermeth 5.5620e-05 1.0000e+00 weaklyHypermeth 5.3073e-04 9.9902e-01 weaklyHypermeth 8.6730e-03 1.0000e+00 weaklyHypermeth 0.1493497 1.5194e-02 lowCoverage 2.0533e-01 lowCoverage 0.890424 0.9132150 -0.02754690 6 0.8833448 0.907830 -0.02448501 9.5793e-01 2.0101e-01 insignificant 1.0000e+00 1.00000000 insignificant 9.5475e-01 1.5020e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.03888154 1.3967e-01 lowCoverage 1.00000000 lowCoverage 0.7484407 0.9132150 -0.16518398 6 0.7494664 0.907830 -1.5836e-01 9.9951e-01 5.6844e-05 weaklyHypometh 1.0000e+00 9.3187e-04 weaklyHypometh 9.9213e-01 3.0854e-04 weaklyHypometh 1.0000e+00 6.8564e-03 weaklyHypometh -0.1882312 5.3943e-03 weaklyHypometh 1.2461e-01 insignificant chr17 57890050 57891050 50966 METTL2A ENSG00000087995 0.6858741 258 7 0.6428193 276 7 0.7904926 174 8 0.7461987 213 6 0.7949735 130 8 0.9084330 431 8 0.7591224 200 8 0.7000674 183 8 0.72908944 153 9 0.787963 112 8 0.7867367 388 9 0.7439394 72 5 0.7558746 140 6 0.7000000 41 4 0.8817989 139 6 0.7829802 74 5 0.728571 72 4 0.7542660 256 7 0.8448644 228 9 0.8776426 410 8 0.782014 116 9 0.7390212 130 9 0.8038488 167 8 0.8761598 110 5 0.7826279 106 5 0.8170738 202 9 0.7879818 99 8 0.7753623 89 7 0.8928426 164 8 0.8785476 244 9 0.8544931 360 9 0.832916 362 8 0.6545782 176 8 0.64195527 161 7 0.6444716 267 4 0.7659341 49 4 0.7333692 197 6 0.7499274 315 9 0.8734770 287 7 0.8457456 289 8 0.8125285 233 8 0.8293793 227 7 0.8580356 251 9 0.6562045 0.6908326 0.6127860 0.6871477 0.7765144 0.8444770 0.6600336 0.68022777 0.7267655 0.6232710 0.7272981 0.6675015 0.6918905 0.67246583 0.7451440 0.65338275 0.62043876 0.6617889 0.72321606 0.7910047 0.6885471 0.7103175 0.6653277 0.7599541 0.6248988 0.7433775 0.7189217 0.6623706 0.7440231 0.7594966 0.7832437 0.7912037 0.5924209 0.5593287 0.64067153 0.55257442 0.6044194 0.6973328 0.7450186 0.7299871 0.6522253 0.6915177 0.7597557 3 0.7655696 0.7906003 -0.01676644 8 0.802982 0.820198 -0.01721593 0.7627869 6.2448e-02 insignificant 1.00000 1.000000 insignificant 0.922285 1.9340e-02 weaklyHypometh 1 0.966702 insignificant -0.0484887 0.02651034 weaklyHypometh 1.00000 insignificant 0.7655696 0.7072961 0.06261532 8 0.802982 0.7230235 0.07995891 4.1860e-05 9.9040e-01 weaklyHypermeth 4.5500e-04 1.0000e+00 weaklyHypermeth 2.8509e-02 7.9299e-01 weaklyHypermeth 2.5454e-01 1.0000e+00 insignificant 0.07171275 2.8804e-02 weaklyHypermeth 3.4704e-01 insignificant 0.7655696 0.7498057 -0.00809670 7 0.802982 0.842009 -0.0390266 9.6140e-01 4.9049e-02 weaklyHypometh 1.0000e+00 8.7588e-01 insignificant 9.9404e-01 2.0968e-02 weaklyHypometh 1.0000e+00 0.58244353 insignificant -0.07374781 7.9504e-04 weaklyHypometh 6.6253e-02 weaklyHypometh 0.7906003 0.7072961 0.0831031 8 0.820198 0.7230235 0.0971748 2.1356e-06 9.8238e-01 weaklyHypermeth 3.3368e-05 1.0000e+00 weaklyHypermeth 2.1269e-03 9.8736e-01 weaklyHypermeth 2.5938e-02 1.0000e+00 weaklyHypermeth 0.1202014 1.8487e-03 weaklyHypermeth 4.0189e-02 weaklyHypermeth 0.790600 0.7498057 0.01049187 8 0.8201984 0.842009 -0.02181062 6.4607e-01 8.8530e-02 insignificant 1.0000e+00 1.00000000 insignificant 7.8437e-01 1.9455e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.02525914 1.7288e-01 insignificant 1.00000000 insignificant 0.7072961 0.7498057 -0.06388767 7 0.7230235 0.842009 -1.1899e-01 9.9722e-01 2.2760e-04 weaklyHypometh 1.0000e+00 3.5016e-03 weaklyHypometh 9.9875e-01 3.8816e-03 weaklyHypometh 1.0000e+00 5.9716e-02 weaklyHypometh -0.1454606 8.0556e-04 weaklyHypometh 3.0153e-02 weaklyHypometh chr17 57914750 57915750 50967 TLK2 ENSG00000146872 0.5206645 383 6 0.6183577 272 6 0.4120879 45 4 0.5964228 301 6 0.7619048 65 6 0.6471592 266 6 0.6976424 128 6 0.3940196 96 6 0.58472222 50 6 0.507937 36 4 0.5815956 179 6 0.6785714 38 4 0.6555943 72 6 0.6151175 63 6 0.6306672 70 6 0.4583333 15 2 0.290909 25 2 0.6151512 386 6 0.6518077 108 6 0.6270590 212 6 0.370040 26 2 0.5000000 12 2 0.6333980 197 8 0.7441077 44 4 0.6954861 79 4 0.7481394 173 6 0.8520833 23 2 0.4791667 28 4 0.7033100 171 6 0.6625180 162 6 0.7116435 215 5 0.478953 210 6 0.3361926 158 6 0.61117208 103 6 0.4619048 112 6 0.2500000 38 2 0.4317185 137 6 0.4406328 165 4 0.6665503 390 6 0.7450602 320 6 0.4486178 341 6 0.5903855 393 6 0.6749075 288 7 0.5525746 0.5083288 0.4974838 0.5565075 0.6767913 0.5593786 0.6356711 0.54730213 0.5210280 0.4272363 0.5347348 0.6094793 0.6152937 0.55407780 0.6280635 0.49707805 0.57478111 0.5509050 0.61047056 0.5953872 0.3949711 0.5850864 0.5074387 0.6349476 0.6341511 0.5805765 0.7485981 0.4745883 0.5377981 0.6001183 0.5380322 0.5027389 0.4239313 0.5086431 0.38551402 0.43362914 0.3910393 0.5349823 0.5985158 0.6378297 0.5367840 0.6228274 0.6042630 2 0.6320285 0.6268657 0.00326930 6 0.572559 0.611332 -0.03877388 0.7753071 8.4605e-02 insignificant 1.00000 1.000000 insignificant 0.347936 2.8826e-02 inconclusive 1 1.000000 insignificant -0.0542842 0.27685493 lowCoverage 1.00000 lowCoverage 0.6320285 0.5497896 0.07861915 6 0.572559 0.5188204 0.05373806 1.7023e-04 9.6859e-01 weaklyHypermeth 1.6854e-03 1.0000e+00 weaklyHypermeth 1.2258e-03 9.6619e-01 weaklyHypermeth 1.6792e-02 1.0000e+00 weaklyHypermeth 0.15534940 2.4847e-02 weaklyHypermeth 3.1452e-01 insignificant 0.6320285 0.6512702 -0.02355232 6 0.572559 0.604275 -0.0317169 9.6858e-01 1.5882e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7786e-01 2.0620e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.04781804 4.2957e-01 insignificant 1.0000e+00 insignificant 0.6268657 0.5497896 0.0766400 6 0.611332 0.5188204 0.0925119 1.1074e-04 9.8352e-01 weaklyHypermeth 1.2584e-03 1.0000e+00 weaklyHypermeth 5.5544e-04 9.8960e-01 weaklyHypermeth 8.8165e-03 1.0000e+00 weaklyHypermeth 0.2096336 7.3376e-03 lowCoverage 1.1716e-01 lowCoverage 0.626866 0.6512702 -0.02611120 6 0.6113324 0.604275 0.00705695 6.6737e-01 4.2414e-01 insignificant 1.0000e+00 1.00000000 insignificant 3.0558e-01 4.2953e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.00646619 9.2297e-01 lowCoverage 1.00000000 lowCoverage 0.5497896 0.6512702 -0.10465578 6 0.5188204 0.604275 -8.5455e-02 9.9648e-01 4.9074e-03 weaklyHypometh 1.0000e+00 5.1656e-02 weaklyHypometh 9.9936e-01 4.4902e-03 weaklyHypometh 1.0000e+00 6.7017e-02 weaklyHypometh -0.2031674 1.8999e-02 weaklyHypometh 2.8786e-01 insignificant chr17 58850850 58851850 50986 TANC2 ENSG00000170921 0.8990969 342 8 0.8893790 377 8 0.8830575 212 8 0.9342572 348 8 0.9665608 117 6 0.8216133 685 8 0.8937440 172 7 0.9215191 229 8 0.89202671 226 7 0.932908 207 8 0.9020218 237 8 0.7996875 113 4 0.9279334 304 8 0.9416722 118 7 0.9129600 219 8 0.8809524 73 4 0.749086 80 6 0.8972399 412 8 0.9229414 256 7 0.9269293 348 8 0.925564 77 6 0.8943429 144 8 0.8941077 239 8 0.8503352 107 8 0.9256684 111 7 0.9094902 340 8 0.7325615 149 7 0.9032533 121 7 0.8728669 219 6 0.9343009 380 8 0.9394925 467 8 0.925407 381 8 0.7921597 295 8 0.73720238 87 4 0.7500000 17 1 0.9352227 40 2 0.8047286 172 8 0.9372990 290 8 0.9423885 337 7 0.9406312 293 5 0.9136521 307 5 0.9128003 296 7 0.8972016 318 8 0.8929727 0.8579224 0.8936194 0.9286412 0.9160459 0.9033910 0.9231265 0.91285149 0.8462483 0.9101122 0.9034549 0.8720692 0.9077753 0.93864567 0.9342422 0.81497849 0.70892948 0.8864609 0.88718429 0.9108847 0.9041990 0.8744464 0.8936651 0.9619629 0.8797746 0.9180398 0.8650726 0.9003509 0.8587903 0.9041484 0.9262588 0.9225931 0.7999137 0.8163004 0.84180176 0.90004794 0.9015545 0.9618655 0.9076575 0.9023213 0.9213639 0.8649797 0.9164100 4 0.9008867 0.9184345 -0.01506666 8 0.865642 0.866907 -0.00126578 0.4113489 9.9433e-02 insignificant 1.00000 1.000000 insignificant 0.399620 1.4512e-01 insignificant 1 1.000000 insignificant 0.0024968 0.90189573 insignificant 1.00000 insignificant 0.9008867 0.8879023 0.01553598 7 0.865642 0.8127914 0.05285028 2.6512e-03 7.3968e-01 weaklyHypermeth 1.9785e-02 1.0000e+00 weaklyHypermeth 3.2527e-01 3.3138e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.06867727 1.2122e-01 insignificant 1.0000e+00 insignificant 0.9008867 0.9136041 -0.01275241 7 0.865642 0.917591 -0.0519496 5.3085e-01 2.1122e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.3762e-01 8.2185e-02 insignificant 1.0000e+00 1.00000000 insignificant -0.02655542 8.2604e-02 insignificant 1.0000e+00 insignificant 0.9184345 0.8879023 0.0311932 7 0.866907 0.8127914 0.0541161 4.1144e-02 9.8148e-01 weaklyHypermeth 2.5556e-01 1.0000e+00 insignificant 4.2815e-01 7.3949e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0661805 1.4001e-01 insignificant 1.0000e+00 insignificant 0.918435 0.9136041 0.00166242 7 0.8669074 0.917591 -0.05068382 1.8119e-01 2.8773e-01 insignificant 1.0000e+00 1.00000000 insignificant 4.7715e-01 1.1134e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.02905219 1.3862e-01 insignificant 1.00000000 insignificant 0.8879023 0.9136041 -0.02805617 6 0.8127914 0.917591 -1.0480e-01 7.5365e-01 1.0066e-01 insignificant 1.0000e+00 6.1375e-01 insignificant 6.9662e-01 1.9695e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0952327 4.6491e-02 weaklyHypometh 4.9765e-01 insignificant chr17 58864950 58865950 50988 TANC2 ENSG00000170921 0.8182414 532 9 0.7070073 282 10 0.6856918 278 9 0.7811284 541 9 0.7813853 127 9 0.7216936 574 12 0.6761882 228 10 0.6877958 174 11 0.68197032 203 10 0.718076 190 9 0.6977889 275 9 0.6769028 159 9 0.7967414 249 9 NA 0 0 0.7735537 220 9 0.6599892 114 9 0.628448 198 9 0.6489649 564 9 0.8205632 292 9 0.7308064 392 11 0.695623 99 10 0.6929847 209 11 0.7901481 354 10 0.7986111 91 9 0.9207005 158 9 0.9361908 243 9 0.7085965 231 12 0.7760417 139 10 0.6947134 210 10 0.8677042 351 10 0.7995660 381 11 0.769386 488 9 0.3241855 236 11 0.70270724 234 9 0.2500000 5 0 0.7648413 141 9 0.2363973 141 12 0.6317228 294 10 0.8193409 560 9 0.8680198 541 9 0.7978300 441 9 0.7640070 657 9 0.8181045 592 11 0.9132841 0.8580113 0.8247080 0.9475198 0.8894292 0.8764273 0.8899254 0.82309211 0.8494347 0.8550556 0.8669819 0.8978263 0.9120146 NA 0.9307195 0.87489154 0.84232668 0.8529094 0.93630967 0.8794981 0.8749653 0.8301481 0.9193648 0.9920719 0.9526876 0.9277905 0.8694913 0.9491426 0.8988287 0.9302981 0.8793278 0.9230415 0.2767418 0.7280178 NA 0.81998389 0.2744902 0.7461162 0.8792862 0.8802226 0.8404983 0.8506839 0.8712597 9 0.8826896 0.8821936 -0.02078430 9 0.725496 0.762808 -0.03731207 0.9995012 2.6846e-02 weaklyHypometh 1.00000 0.977643 insignificant 0.999994 2.1325e-04 weaklyHypometh 1 0.053313 weaklyHypometh -0.0668412 0.02803029 weaklyHypometh 1.00000 insignificant 0.8826896 0.5718363 0.29423747 9 0.725496 0.5075941 0.21790226 1.5652e-22 1.0000e+00 hypermethylated 5.5900e-21 1.0000e+00 hypermethylated 5.5178e-08 9.9493e-01 hypermethylated 1.5765e-06 1.0000e+00 hypermethylated 0.23570521 6.1735e-02 insignificant 6.6382e-01 insignificant 0.8826896 0.8556073 0.03409656 9 0.725496 0.813174 -0.0876772 9.4548e-05 3.4086e-04 weaklyHypermeth 4.1108e-03 2.6220e-02 weaklyHypermeth 2.6871e-02 4.8476e-03 weaklyHypermeth 6.8901e-01 0.28515505 insignificant -0.09277953 1.6601e-03 weaklyHypometh 1.1067e-01 insignificant 0.8821936 0.5718363 0.3119284 9 0.762808 0.5075941 0.2552143 4.6167e-17 1.0000e+00 hypermethylated 1.5920e-15 1.0000e+00 hypermethylated 9.7656e-11 1.0000e+00 hypermethylated 8.8778e-09 1.0000e+00 hypermethylated 0.3025465 2.6440e-02 weaklyHypermeth 3.2642e-01 insignificant 0.882194 0.8556073 0.05138378 9 0.7628084 0.813174 -0.05036514 9.4866e-06 4.7044e-03 weaklyHypermeth 4.3121e-04 0.26135811 weaklyHypermeth 3.3297e-04 3.3728e-01 weaklyHypermeth 2.0811e-02 1.0000000 weaklyHypermeth -0.02593829 3.9757e-01 insignificant 1.00000000 insignificant 0.5718363 0.8556073 -0.26723206 9 0.5075941 0.813174 -3.0558e-01 1.0000e+00 4.4155e-08 hypomethylated 1.0000e+00 1.1934e-06 hypomethylated 1.0000e+00 1.9152e-04 hypomethylated 1.0000e+00 4.6713e-03 hypomethylated -0.3284847 1.9912e-02 weaklyHypometh 2.9719e-01 insignificant chr17 60127350 60128350 51023 SMURF2 ENSG00000108854 0.64229 352 9 0.613433 177 9 0.578746 147 9 0.503035 225 9 0.665512 95 9 0.562843 390 9 0.5622048 147 9 0.511255 184 9 0.644325 107 7 0.567489 148 9 0.642419 326 9 0.6240079 95 7 0.649772 155 9 0.937500 21 2 0.697948 160 9 0.4566434 69 6 0.454378 70 6 0.641639 242 9 0.601816 209 9 0.670831 285 9 0.578237 60 6 0.704200 98 9 0.471917 254 9 0.619008 67 6 0.688648 85 8 0.631344 288 9 0.581980 117 6 0.329762 44 2 0.607848 161 10 0.648152 207 9 0.680617 218 9 0.679652 463 9 0.6073377 149 9 0.5977222 144 9 0.62288461 227 9 0.6120130 57 6 0.698630 99 6 0.5699172 263 9 0.661942 373 9 0.590241 295 9 0.653430 326 9 0.558869 326 9 0.596192 309 9 0.6585262 0.6406031 0.582048 0.696286 0.6939606 0.647502 0.654966 0.5885835 0.6618597 0.6014687 0.6865910 0.6353359 0.6829345 0.755962 0.7203986 0.6640131 0.463459 0.6891629 0.6712681 0.675237 0.687127 0.6915662 0.650170 0.679469 0.7408621 0.6758539 0.628358 0.555039 0.6457149 0.7153910 0.6918375 0.680353 0.6828931 0.6233371 0.6928488 0.65612604 0.648896 0.65701833 0.6906483 0.6585116 0.6815622 0.698417 0.685369 4 0.652053 0.675558 -0.01293169 9 0.606597 0.608586 -0.00198930 0.5240347 3.1321e-01 insignificant 1.00000 1.000000 insignificant 0.5512036 0.53495946 insignificant 1 1.00000 insignificant 0.0096241 0.8051972 insignificant 1 insignificant 0.652053 0.653887 2.0244e-04 9 0.606597 0.6660238 -0.0594267 2.7517e-01 5.4236e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.7883e-01 5.6804e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0066796 8.2106e-01 insignificant 1.0000e+00 insignificant 0.652332 0.666053 -0.0223479 9 0.622413 0.623596 -0.00118311 9.7642e-01 1.4950e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8945e-01 1.1508e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00073015 9.8114e-01 insignificant 1.0000e+00 insignificant 0.675558 0.653887 0.01351710 9 0.608586 0.6660238 -0.0574374 1.1337e-01 7.3801e-01 insignificant 7.3144e-01 1.0000e+00 insignificant 5.7009e-01 8.2688e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01630366 6.5281e-01 insignificant 1.0000e+00 insignificant 0.675808 0.666053 -0.00825158 9 0.610347 0.623596 -0.0132491 7.4234e-01 1.0676e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.2363e-01 1.6797e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01035425 7.8104e-01 insignificant 1.000000 insignificant 0.656284 0.666053 -0.0207710 9 0.6702359 0.623596 0.04663950 8.9049e-01 2.9074e-02 weaklyHypometh 1.0000e+00 2.4228e-01 insignificant 9.2872e-01 6.2636e-02 insignificant 1.0000e+00 5.7465e-01 insignificant 0.0059494 8.2747e-01 insignificant 1.0000e+00 insignificant chr17 60549550 60550550 51039 ENSG00000211170 0.14113 537 24 0.067802 1017 32 0.097008 1075 30 0.108540 560 20 0.063613 726 27 0.104135 1312 30 0.0337263 1206 30 0.050552 895 30 0.033627 1076 30 0.038950 839 26 0.040160 926 29 0.0566090 1044 27 0.041334 957 26 0.199148 256 7 0.036710 1172 21 0.0770247 1181 27 0.071296 1426 24 0.061483 389 16 0.090710 1142 28 0.087441 858 28 0.059237 303 26 0.119193 312 18 0.051235 604 28 0.053877 404 25 0.157464 224 16 0.088276 1125 31 0.064910 588 27 0.033724 404 21 0.107268 649 27 0.049212 1233 31 0.052439 1704 31 0.098062 848 31 0.0852847 798 30 0.0695284 530 22 0.05785864 680 15 0.0571429 159 14 0.051243 500 21 0.0955744 845 29 0.052788 592 22 0.097006 378 22 0.044444 265 11 0.030303 276 14 0.100006 397 14 0.0617529 0.0402583 0.040423 0.044513 0.0323745 0.076334 0.008456 0.0215971 0.0106100 0.0135906 0.0295399 0.0166167 0.0200199 0.043789 0.0224128 0.0182390 0.069274 0.0442223 0.0363510 0.069239 0.030806 0.0574639 0.027528 0.019906 0.0552469 0.0355174 0.021829 0.035818 0.0345858 0.0238070 0.0278601 0.098541 0.0268706 0.0302195 0.0188413 0.03740669 0.016359 0.10449976 0.0228913 0.0304454 0.0232471 0.013549 0.037417 9 0.037117 0.051084 -0.00035818 28 0.071492 0.073586 -0.00209336 0.1438652 7.2100e-01 insignificant 1.00000 1.000000 insignificant 0.0862002 0.54246952 insignificant 1 1.00000 insignificant -0.0028584 0.8399976 insignificant 1 insignificant 0.037117 0.056948 -7.9398e-05 28 0.071492 0.0701510 0.0013414 9.9617e-02 5.2934e-01 insignificant 6.2652e-01 1.0000e+00 insignificant 2.4628e-02 9.6755e-01 inconclusive 2.5130e-01 1.0000e+00 insignificant 0.0056111 6.3697e-01 insignificant 1.0000e+00 insignificant 0.037127 0.075472 0.0010031 18 0.073727 0.076291 -0.00256458 7.9722e-03 8.6625e-01 weaklyHypermeth 1.5632e-01 1.0000e+00 insignificant 4.5341e-04 9.9973e-01 weaklyHypermeth 1.6364e-02 1.0000e+00 weaklyHypermeth 0.01014009 5.6624e-01 insignificant 1.0000e+00 insignificant 0.051084 0.056948 0.00095368 28 0.073586 0.0701510 0.0034348 2.3443e-01 8.7387e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.6182e-01 9.9920e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00846947 5.1602e-01 insignificant 1.0000e+00 insignificant 0.051044 0.075472 0.00085635 18 0.073482 0.076291 -0.0028097 9.7405e-02 6.9994e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.0087e-02 9.9973e-01 weaklyHypermeth 6.1402e-01 1.0000e+00 insignificant 0.01299846 4.8136e-01 insignificant 1.000000 insignificant 0.056776 0.075472 0.0021662 18 0.0678789 0.076291 -0.00841223 5.9013e-01 7.8568e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.5945e-01 9.9898e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0045290 7.8540e-01 insignificant 1.0000e+00 insignificant chr17 62731750 62732750 51091 ENSG00000207410 0.67779 124 8 0.595045 170 9 0.594444 85 9 0.766883 124 6 0.641378 103 9 0.725074 205 9 0.5548077 89 10 0.607019 139 9 0.672857 88 9 0.691509 100 9 0.748556 267 9 0.8250842 61 9 0.773707 126 9 0.777984 54 6 0.751068 126 10 0.4875000 47 3 0.708333 22 2 0.770283 145 8 0.765302 197 9 0.742021 169 10 0.602092 73 7 0.673106 73 6 0.777255 108 10 0.738961 58 7 0.827336 72 6 0.731857 195 10 0.791632 70 6 0.583333 36 5 0.621594 117 9 0.822723 152 10 0.763054 142 9 0.800028 248 10 0.6861428 146 10 0.6651337 111 9 0.72557948 180 9 0.7500000 26 0 0.612734 83 9 0.6645581 158 9 0.830175 99 6 0.747998 126 8 0.693750 103 6 0.783951 51 6 0.736373 139 6 0.7398975 0.5923228 0.604659 0.789952 0.6299014 0.780379 0.610558 0.6691977 0.6693548 0.7713962 0.7875310 0.7903130 0.7820719 0.804196 0.7608561 0.4314516 0.738277 0.8229896 0.7889270 0.774529 0.680142 0.8171228 0.814134 0.774808 0.7880250 0.7358738 0.849254 0.669003 0.7351937 0.8490976 0.8026432 0.815463 0.7007136 0.7319907 0.7230853 0.76478495 0.598010 0.75061851 0.8897104 0.7831299 0.8400538 0.844683 0.752448 2 0.772634 0.796131 -0.03495140 9 0.694695 0.621438 0.07325638 0.7904051 3.6044e-02 weaklyHypometh 1.00000 1.000000 insignificant 0.9118251 0.00839436 weaklyHypometh 1 1.00000 insignificant -0.0339153 0.2993249 insignificant 1 insignificant 0.773082 0.742898 2.6843e-02 9 0.710919 0.6607577 0.0501615 9.8454e-02 9.4665e-01 insignificant 6.2313e-01 1.0000e+00 insignificant 4.5511e-01 8.5653e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0098075 7.3169e-01 insignificant 1.0000e+00 insignificant 0.772895 0.783784 -0.0559602 6 0.699791 0.700978 -0.00118777 9.7413e-01 7.0679e-03 weaklyHypometh 1.0000e+00 5.0485e-01 insignificant 9.9263e-01 5.1951e-04 weaklyHypometh 1.0000e+00 1.7317e-01 insignificant -0.06461716 5.6998e-02 insignificant 9.3439e-01 insignificant 0.797610 0.742898 0.06239479 9 0.639891 0.6607577 -0.0208663 8.7945e-04 9.9951e-01 weaklyHypermeth 9.1609e-03 1.0000e+00 weaklyHypermeth 6.3836e-03 9.5333e-01 weaklyHypermeth 8.2874e-02 1.0000e+00 weaklyHypermeth 0.04372283 1.9149e-01 insignificant 1.0000e+00 insignificant 0.798507 0.783784 -0.01863435 6 0.734427 0.700978 0.0334486 5.7061e-01 1.7141e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.2674e-01 1.1824e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03070184 3.8370e-01 insignificant 1.000000 insignificant 0.744650 0.785300 -0.0868862 6 0.6929093 0.771076 -0.07816700 9.1994e-01 2.0411e-04 weaklyHypometh 1.0000e+00 3.6448e-03 weaklyHypometh 9.7968e-01 1.1175e-03 weaklyHypometh 1.0000e+00 2.8653e-02 weaklyHypometh -0.0744247 3.8640e-02 weaklyHypometh 4.8911e-01 insignificant chr17 62917350 62918350 51098 MIR548D2 ENSG00000207688 0.43330 111 6 0.528070 82 6 0.146605 85 6 0.438624 82 2 0.377778 43 4 0.811888 167 6 0.4781145 26 2 0.385000 93 3 0.513005 56 3 0.644167 62 5 0.669720 98 6 0.3496599 29 2 0.245425 132 6 0.662309 48 2 0.355334 101 6 0.9230769 15 1 0.303846 34 3 0.221209 111 3 0.316702 160 6 0.672582 106 5 0.348602 41 2 0.193878 60 3 0.383107 37 2 0.407686 42 2 0.672619 39 2 0.494767 114 6 0.434524 92 4 0.604167 27 2 0.572617 98 6 0.678344 132 6 0.430778 210 6 0.676455 116 6 0.1456583 120 6 0.1446970 88 6 0.14285714 100 5 0.0000000 26 2 0.156250 112 2 0.0000000 167 6 0.271168 125 5 0.561979 118 6 0.101481 135 6 0.120549 119 6 0.517128 83 2 0.4996158 0.4060526 0.250810 0.468942 0.3449074 0.739597 0.412290 0.4173611 0.5057134 0.5857639 0.6629071 0.3006349 0.2761364 0.463763 0.3435748 0.5462799 0.295513 0.1939849 0.3029897 0.520414 0.499774 0.1065476 0.500679 0.441510 0.6406250 0.5079102 0.403571 0.525000 0.4635826 0.5623259 0.2600557 0.702943 0.0096405 0.0365657 0.0000000 0.00000000 0.000000 0.00000000 0.1987436 0.2542014 0.0975185 0.164994 0.270187 2 0.442683 0.466270 -0.02077105 3 0.460485 0.561073 -0.10058717 0.7361604 4.5560e-01 lowCoverage 1.00000 1.000000 lowCoverage 0.7078806 0.11827676 lowCoverage 1 1.00000 lowCoverage -0.0176410 0.7827296 lowCoverage 1 lowCoverage 0.443223 0.014682 4.2470e-01 3 0.460485 0.1533281 0.3071573 2.7334e-15 9.9965e-01 lowCoverage 6.3569e-14 1.0000e+00 lowCoverage 7.4398e-10 9.9320e-01 lowCoverage 2.9759e-08 1.0000e+00 lowCoverage 0.3755772 7.0888e-07 lowCoverage 4.8981e-05 lowCoverage 0.442683 0.212069 0.2344941 3 0.460485 0.401678 0.05880721 6.5141e-05 9.9973e-01 lowCoverage 1.9159e-03 1.0000e+00 lowCoverage 1.1606e-03 9.6039e-01 lowCoverage 3.6268e-02 1.0000e+00 lowCoverage 0.15935962 1.8748e-01 lowCoverage 1.0000e+00 lowCoverage 0.465740 0.014706 0.44739028 6 0.512303 0.1703646 0.3419382 1.3920e-17 9.9488e-01 hypermethylated 4.7999e-16 1.0000e+00 hypermethylated 1.6598e-09 9.9541e-01 hypermethylated 7.9037e-08 1.0000e+00 hypermethylated 0.39321821 1.8261e-06 lowCoverage 1.5217e-04 lowCoverage 0.466270 0.212069 0.25416891 5 0.561073 0.401678 0.1593944 1.5845e-05 9.9767e-01 hypermethylated 6.3380e-04 1.0000e+00 hypermethylated 3.3733e-03 9.9719e-01 weaklyHypermeth 1.1160e-01 1.0000e+00 insignificant 0.17700065 1.4916e-01 lowCoverage 1.000000 lowCoverage 0.014706 0.210708 -0.1861251 5 0.1703646 0.335198 -0.16483338 9.9871e-01 9.5471e-08 weaklyHypometh 1.0000e+00 2.8080e-06 weaklyHypometh 9.9714e-01 2.6383e-06 weaklyHypometh 1.0000e+00 1.1992e-04 weaklyHypometh -0.2162176 8.8617e-02 lowCoverage 8.6036e-01 lowCoverage chr17 63282950 63283950 51102 BPTF ENSG00000171634 0.64870 147 5 0.628354 125 5 0.663636 154 5 0.708929 63 5 0.546587 92 5 0.668333 147 5 0.7116667 118 5 0.707109 88 5 0.645481 114 5 0.630532 110 5 0.663278 147 5 0.7063492 93 5 0.640085 95 5 NA 0 0 0.731290 116 5 0.5981863 109 5 0.687459 176 5 0.755556 98 5 0.639610 127 5 0.663606 127 5 0.844444 27 2 0.630000 24 3 0.709402 56 5 0.664706 38 2 0.800000 9 0 0.664622 117 5 0.623232 25 2 0.609375 35 2 0.631667 67 5 0.668519 111 5 0.721389 61 5 0.590660 84 3 0.5988889 58 5 0.6956044 70 5 0.60665266 90 5 0.7314286 28 4 0.750000 41 4 0.6713725 63 5 0.717066 129 5 0.690675 143 5 0.733333 127 5 0.726773 162 5 0.745584 109 5 0.7325148 0.7051784 0.778947 0.804041 0.7168003 0.779912 0.831383 0.7824648 0.7436450 0.7563948 0.7755678 0.7936926 0.7655780 NA 0.8080789 0.7218086 0.794575 0.8608187 0.7616200 0.763426 0.886550 0.7894737 0.787404 0.773994 0.8842105 0.7808741 0.695800 0.765282 0.7379825 0.8134503 0.8423246 0.696839 0.6742105 0.7668595 0.7657305 0.81233083 0.857895 0.81217750 0.8278869 0.7804720 0.8488458 0.833322 0.856350 2 0.735530 0.672783 0.00927328 5 0.670065 0.659227 0.01083841 0.4177452 5.7160e-01 insignificant 1.00000 1.000000 insignificant 0.6128576 0.13515748 insignificant 1 1.00000 insignificant -0.0143214 0.5743532 lowCoverage 1 lowCoverage 0.735530 0.671429 1.9255e-02 5 0.670065 0.6510374 0.0190276 1.9207e-01 4.5678e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.9182e-01 2.3671e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0101446 7.2782e-01 lowCoverage 1.0000e+00 lowCoverage 0.735530 0.652239 -0.0497981 5 0.670065 0.719573 -0.04950831 9.9286e-01 3.2237e-03 weaklyHypometh 1.0000e+00 2.4798e-01 insignificant 9.9737e-01 1.0110e-03 weaklyHypometh 1.0000e+00 2.5148e-01 insignificant -0.05717302 1.1546e-03 lowCoverage 1.0065e-01 lowCoverage 0.672783 0.671429 0.01016007 5 0.659227 0.6510374 0.0081892 5.7580e-01 6.6722e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.8915e-01 7.3590e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00417677 9.0415e-01 lowCoverage 1.0000e+00 lowCoverage 0.672783 0.652239 -0.05840616 5 0.659227 0.719573 -0.0603467 9.9193e-01 1.7839e-02 weaklyHypometh 1.0000e+00 9.9105e-01 insignificant 9.9409e-01 5.5505e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04285163 9.7691e-02 lowCoverage 1.000000 lowCoverage 0.671429 0.652239 -0.0688948 5 0.6510374 0.719573 -0.06853594 9.6219e-01 4.1306e-02 weaklyHypometh 1.0000e+00 3.2525e-01 insignificant 9.3526e-01 2.2979e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0470284 1.3310e-01 lowCoverage 1.0000e+00 lowCoverage chr17 65095950 65096950 51114 MAP2K6 ENSG00000108984 0.65453 125 7 0.619125 194 7 0.484199 80 7 0.821954 117 7 0.715208 72 5 0.785581 323 7 0.5824675 66 7 0.768991 122 7 0.637755 77 7 0.788095 66 5 0.766446 278 7 0.6428571 20 1 0.847279 79 7 0.776155 56 7 0.690391 101 7 0.4318182 40 3 0.533333 9 0 0.698942 88 7 0.821281 159 7 0.741087 212 7 0.690476 20 1 0.564339 82 7 0.779031 89 5 0.716746 90 7 0.714286 45 5 0.730656 206 7 0.621908 85 7 0.654762 24 1 0.727367 112 6 0.755315 235 7 0.832422 225 7 0.782159 218 7 0.5799667 162 7 0.4136752 49 5 0.42702325 285 7 0.9200000 14 2 0.678755 107 7 0.7361894 190 7 0.758791 126 7 0.743349 95 7 0.837087 115 7 0.712160 53 5 0.804762 127 7 0.6394726 0.6323331 0.585427 0.823904 0.7218878 0.789986 0.550496 0.8040780 0.5887446 0.8286762 0.7848868 0.7000000 0.8699567 0.777826 0.6641441 0.5808210 0.654650 0.7425291 0.8009034 0.734127 0.566667 0.6746001 0.823392 0.816429 0.7727273 0.7453222 0.659463 0.750000 0.7087742 0.7843211 0.8343246 0.785176 0.7166147 0.5217509 0.5263101 0.92635074 0.704182 0.72990098 0.7714130 0.8235316 0.8319650 0.749729 0.843636 1 0.770140 0.765199 -0.00780721 7 0.730003 0.738817 -0.00881404 0.7719360 3.1061e-01 insignificant 1.00000 1.000000 insignificant 0.7963557 0.37935757 insignificant 1 1.00000 insignificant -0.0237476 0.4857318 insignificant 1 insignificant 0.770140 0.578686 1.7882e-01 7 0.730003 0.5667026 0.1633006 5.2626e-06 9.9989e-01 weaklyHypermeth 7.3092e-05 1.0000e+00 weaklyHypermeth 7.6475e-02 9.9020e-01 insignificant 6.3730e-01 1.0000e+00 insignificant 0.0644399 4.6831e-01 insignificant 1.0000e+00 insignificant 0.770140 0.810078 -0.0543184 7 0.730003 0.783219 -0.05321530 9.6132e-01 2.3058e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.4384e-01 7.2477e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.08085501 3.1063e-02 weaklyHypometh 7.5762e-01 insignificant 0.765199 0.578686 0.18427578 7 0.738817 0.5667026 0.1721147 2.4876e-05 9.9999e-01 weaklyHypermeth 3.2732e-04 1.0000e+00 weaklyHypermeth 8.5060e-02 9.9512e-01 insignificant 6.7643e-01 1.0000e+00 insignificant 0.08818750 3.2538e-01 insignificant 1.0000e+00 insignificant 0.765199 0.810078 -0.04064433 7 0.738817 0.783219 -0.0444013 9.6928e-01 1.0389e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7143e-01 2.1661e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.05710740 9.0063e-02 insignificant 1.000000 insignificant 0.578686 0.810078 -0.2071482 7 0.5667026 0.783219 -0.21651595 1.0000e+00 6.7605e-05 hypomethylated 1.0000e+00 1.4084e-03 hypomethylated 9.9986e-01 2.0198e-02 weaklyHypometh 1.0000e+00 2.6231e-01 insignificant -0.1452949 1.2969e-01 insignificant 1.0000e+00 insignificant chr17 67929650 67930650 51183 ENSG00000211264 0.71757 263 6 0.661229 152 6 0.575792 180 6 0.672924 307 6 0.644213 61 4 0.725909 349 6 0.7680746 165 6 0.834879 121 6 0.750533 203 6 0.791112 123 6 0.757066 172 6 0.8139805 81 6 0.613460 228 6 0.700529 51 6 0.716008 164 6 0.7558923 60 6 0.740580 148 6 0.534443 414 6 0.753164 101 6 0.691671 242 6 0.867572 58 4 0.542793 184 6 0.800000 164 6 0.779324 97 6 0.727606 104 6 0.694917 177 6 0.641943 81 6 0.844872 79 6 0.709312 165 6 0.765496 242 6 0.760463 305 6 0.854646 244 6 0.2209462 220 6 0.5122631 110 6 0.34685750 492 6 0.5500000 26 3 0.357830 120 6 0.5575691 180 6 0.568995 318 6 0.525731 400 6 0.485210 317 6 0.477716 290 6 0.517313 326 6 0.7249933 0.6656531 0.581293 0.677244 0.6609365 0.730107 0.771152 0.8358907 0.7549839 0.7873047 0.7605945 0.8167828 0.6128389 0.702177 0.7130056 0.7508514 0.737108 0.5409751 0.7548923 0.694388 0.868052 0.5441973 0.803429 0.788253 0.7256734 0.7029606 0.651798 0.848469 0.7071210 0.7698945 0.7642774 0.855278 0.2254079 0.5266890 0.3657465 0.55514286 0.372103 0.55356889 0.5661330 0.5240351 0.4864835 0.476634 0.520802 6 0.702371 0.749474 -0.05446232 6 0.692103 0.746403 -0.05430049 0.9973487 1.1017e-03 weaklyHypometh 1.00000 0.307143 insignificant 0.9866478 0.02118038 weaklyHypometh 1 1.00000 insignificant -0.0381273 0.2493665 insignificant 1 insignificant 0.702371 0.486934 2.5282e-01 6 0.692103 0.4077791 0.2843235 2.7219e-16 1.0000e+00 hypermethylated 6.9793e-15 1.0000e+00 hypermethylated 6.0975e-06 1.0000e+00 hypermethylated 1.4180e-04 1.0000e+00 hypermethylated 0.2867071 2.6821e-03 weaklyHypermeth 6.2375e-02 weaklyHypermeth 0.702371 0.522108 0.1805110 6 0.692103 0.515595 0.17650770 9.8680e-12 1.0000e+00 weaklyHypermeth 7.0486e-10 1.0000e+00 weaklyHypermeth 1.9620e-10 1.0000e+00 weaklyHypermeth 2.4525e-08 1.0000e+00 weaklyHypermeth 0.19595842 8.5741e-07 weaklyHypermeth 4.2871e-04 weaklyHypermeth 0.749474 0.486934 0.32021787 6 0.746403 0.4077791 0.3386240 1.3086e-15 1.0000e+00 hypermethylated 3.7389e-14 1.0000e+00 hypermethylated 3.4649e-06 1.0000e+00 hypermethylated 9.6247e-05 1.0000e+00 hypermethylated 0.32483438 9.7446e-04 hypermethylated 3.0452e-02 hypermethylated 0.749474 0.522108 0.23500422 6 0.746403 0.515595 0.2308082 4.4538e-14 1.0000e+00 hypermethylated 8.9076e-12 1.0000e+00 hypermethylated 7.3484e-10 1.0000e+00 hypermethylated 2.0287e-07 1.0000e+00 hypermethylated 0.23408569 2.2450e-06 hypermethylated 0.002245 hypermethylated 0.486934 0.522108 -0.0587269 6 0.4077791 0.515595 -0.10781585 8.6508e-01 5.1032e-03 weaklyHypometh 1.0000e+00 5.7991e-02 weaklyHypometh 9.6182e-01 3.2210e-02 weaklyHypometh 1.0000e+00 3.6553e-01 insignificant -0.0907487 1.7026e-01 insignificant 1.0000e+00 insignificant chr17 70076650 70077650 51220 ENSG00000218076 0.88580 299 9 0.683881 174 8 0.777173 141 7 0.887195 263 9 0.791694 110 9 0.899354 533 9 0.8008246 216 8 0.828322 160 9 0.643893 118 9 0.853373 66 5 0.864726 255 8 0.9285714 85 7 0.751683 76 5 0.671086 55 5 0.815837 92 7 0.6750712 53 6 1.000000 12 2 0.691453 528 9 0.912114 180 7 0.908241 266 8 0.814678 71 6 0.927273 106 3 0.630556 84 7 0.863690 68 5 0.775093 150 5 0.872209 278 9 0.666176 90 6 0.931169 55 5 0.839764 98 5 0.931355 240 7 0.918271 383 7 0.773802 252 8 0.5139438 207 8 0.5571560 221 7 0.11805556 102 4 0.3333333 8 0 0.574386 232 8 0.4324291 330 7 0.759316 348 9 0.680084 267 9 0.833539 328 9 0.830715 326 8 0.637580 309 9 0.8699909 0.6681306 0.739636 0.899700 0.8123249 0.914303 0.835239 0.7824578 0.8426916 0.9038841 0.7932284 0.9177970 0.7729893 0.874885 0.8382882 0.8877104 0.873404 0.6854046 0.9066084 0.872032 0.927055 0.8962718 0.937710 0.919000 0.7239491 0.8601967 0.854575 0.922039 0.8388414 0.9016845 0.8877624 0.888831 0.5841178 0.5732626 0.0587121 0.52143398 0.569291 0.47250378 0.8835991 0.7974058 0.8237977 0.827509 0.745596 4 0.836596 0.865067 -0.02915364 7 0.658264 0.627119 0.03114592 0.9999407 2.7315e-01 insignificant 1.00000 1.000000 insignificant 0.9974244 0.12891568 insignificant 1 1.00000 insignificant -0.0151550 0.6864810 insignificant 1 insignificant 0.837463 0.434545 3.5650e-01 7 0.755744 0.4032130 0.3525308 4.2870e-33 1.0000e+00 hypermethylated 2.0414e-31 1.0000e+00 hypermethylated 2.3308e-11 1.0000e+00 hypermethylated 1.2949e-09 1.0000e+00 hypermethylated 0.3919642 1.8189e-03 weaklyHypermeth 4.5473e-02 weaklyHypermeth 0.837095 0.802281 0.0292007 7 0.713120 0.621206 0.09191425 1.3740e-01 8.2619e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.4793e-01 8.5864e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.06526828 1.9480e-01 insignificant 1.0000e+00 insignificant 0.866916 0.434545 0.36456632 7 0.815254 0.4032130 0.4120411 8.1363e-31 1.0000e+00 hypermethylated 5.4242e-29 1.0000e+00 hypermethylated 2.3558e-09 1.0000e+00 hypermethylated 1.0708e-07 1.0000e+00 hypermethylated 0.40711913 1.2289e-03 weaklyHypermeth 3.6094e-02 weaklyHypermeth 0.865990 0.802790 0.05888496 7 0.741140 0.677679 0.0634613 1.2448e-03 9.7619e-01 weaklyHypermeth 2.9639e-02 1.0000e+00 weaklyHypermeth 3.7311e-03 9.8262e-01 weaklyHypermeth 1.1306e-01 1.0000e+00 insignificant 0.08042325 1.3746e-01 insignificant 1.000000 insignificant 0.434545 0.803299 -0.3416272 8 0.4032130 0.745447 -0.34223371 1.0000e+00 2.0294e-13 hypomethylated 1.0000e+00 1.2684e-11 hypomethylated 1.0000e+00 2.1913e-07 hypomethylated 1.0000e+00 1.2890e-05 hypomethylated -0.3266959 4.1290e-03 weaklyHypometh 1.1160e-01 insignificant chr17 70266250 70267250 51224 SLC9A3R1 ENSG00000109062 0.76523 238 5 0.773434 656 5 0.764671 213 5 0.829259 257 5 0.730010 224 5 0.807064 507 5 0.7353084 149 5 0.856295 261 5 0.760803 143 5 0.835735 126 5 0.832756 322 5 0.8177778 49 5 0.828817 191 5 0.829648 136 5 0.811313 157 5 0.5063636 45 5 0.000000 1 0 0.847760 262 3 0.939311 889 3 0.889672 275 4 0.895816 126 5 0.774603 46 5 0.867383 178 5 0.751000 74 5 0.772941 58 5 0.883513 572 5 0.735095 241 5 0.855517 109 5 0.656710 615 4 0.835045 560 5 0.858740 862 5 0.794356 377 5 0.8676072 268 5 0.8647139 272 5 0.99831650 596 3 0.7400000 33 4 0.791191 157 4 0.8629660 508 5 0.852686 245 5 0.658904 224 3 0.725324 161 5 0.752278 200 5 0.740223 180 4 0.8347478 0.8218350 0.764891 0.839015 0.7976749 0.868102 0.798932 0.8848987 0.8209097 0.8987516 0.8733892 0.8062305 0.8382556 0.873630 0.8474653 0.6486831 NA 0.7921827 0.9180258 0.902847 0.853315 0.8701231 0.885068 0.715527 0.7211746 0.8950864 0.778798 0.843955 0.7844348 0.9005579 0.8895630 0.839284 0.8852409 0.8883933 0.9602129 0.84030374 0.763843 0.85481080 0.8160945 0.6917950 0.8097843 0.705790 0.788690 3 0.854734 0.877947 -0.02003932 5 0.795644 0.831473 -0.03582887 0.9921639 8.2641e-02 insignificant 1.00000 1.000000 insignificant 0.8492275 0.25220799 insignificant 1 1.00000 insignificant -0.0486654 0.3280111 lowCoverage 1 lowCoverage 0.854734 0.896947 -3.5637e-02 5 0.795644 0.8602076 -0.0645632 9.1168e-01 6.9976e-04 weaklyHypometh 1.0000e+00 7.7751e-02 weaklyHypometh 8.8833e-01 9.0458e-03 weaklyHypometh 1.0000e+00 6.9583e-01 insignificant -0.0960712 1.0645e-01 lowCoverage 9.9489e-01 lowCoverage 0.854734 0.759406 0.0991731 5 0.795644 0.764118 0.03152622 2.1701e-05 7.2151e-01 weaklyHypermeth 7.2337e-04 1.0000e+00 weaklyHypermeth 4.4957e-03 9.6788e-01 weaklyHypermeth 1.2845e-01 1.0000e+00 insignificant 0.01217835 8.2429e-01 lowCoverage 1.0000e+00 lowCoverage 0.877947 0.896947 -0.01654197 5 0.831473 0.8602076 -0.0287343 7.7037e-01 4.2508e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 8.7858e-01 4.7955e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.04740579 2.8151e-01 lowCoverage 1.0000e+00 lowCoverage 0.877947 0.759406 0.11844591 5 0.831473 0.764118 0.0673551 3.9940e-05 9.5823e-01 weaklyHypermeth 1.3867e-03 1.0000e+00 weaklyHypermeth 3.8157e-02 9.8508e-01 weaklyHypermeth 7.6314e-01 1.0000e+00 insignificant 0.06084379 1.4397e-01 lowCoverage 1.000000 lowCoverage 0.896947 0.759406 0.1355567 5 0.8602076 0.764118 0.09608937 1.3251e-03 9.9066e-01 weaklyHypermeth 1.6564e-01 1.0000e+00 insignificant 1.0838e-02 9.9925e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.1082496 4.8209e-02 lowCoverage 5.7391e-01 lowCoverage chr17 70640850 70641850 51234 NT5C ENSG00000125458 0.67944 157 4 0.658594 149 6 0.705192 132 6 0.718759 128 4 0.709482 76 6 0.763962 355 6 0.8057564 92 6 0.718155 133 4 0.911429 73 4 0.583786 84 5 0.818287 221 6 0.8398629 59 3 0.832227 100 5 0.765714 48 5 0.492575 108 5 0.7642857 46 5 0.903704 48 2 0.746658 133 4 0.721625 148 5 0.749224 219 6 0.843006 74 4 0.812420 100 4 0.842861 113 6 0.714680 175 5 0.940476 48 3 0.883776 203 6 0.724672 166 4 0.729715 73 3 0.728865 109 5 0.594673 227 6 0.833418 232 6 0.636134 261 6 0.8383096 133 6 0.6388167 63 4 0.68542759 154 6 0.9642857 33 3 0.905924 114 4 0.8291695 187 6 0.750676 122 4 0.847595 158 4 0.875302 106 4 0.846042 118 4 0.737967 137 4 0.8269037 0.7572771 0.634443 0.914801 0.8209842 0.871951 0.820256 0.8261934 0.9283534 0.8539190 0.8427630 0.7670996 0.8568393 0.842512 0.8194831 0.7198508 0.885944 0.8910453 0.8650265 0.878612 0.874964 0.8167337 0.882210 0.810175 0.9265634 0.9022865 0.842220 0.818185 0.8030091 0.9273528 0.8624631 0.851716 0.7570650 0.6488581 0.8259304 0.96659473 0.841679 0.85549867 0.8358465 0.8762874 0.8762282 0.838946 0.880866 3 0.817457 0.855699 -0.03183968 6 0.597170 0.719753 -0.12258258 0.9940045 1.3026e-01 insignificant 1.00000 1.000000 insignificant 0.9607164 0.46822846 insignificant 1 1.00000 insignificant -0.0292885 0.4359284 lowCoverage 1 lowCoverage 0.818945 0.798246 1.0500e-02 5 0.631776 0.7274840 -0.0957075 8.4125e-01 4.3651e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3098e-01 2.5475e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0658861 2.7707e-01 lowCoverage 1.0000e+00 lowCoverage 0.818436 0.851794 -0.0264861 4 0.663523 0.808500 -0.14497795 9.7444e-01 3.3197e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.8296e-01 1.6955e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.06708024 9.0265e-02 lowCoverage 1.0000e+00 lowCoverage 0.857465 0.798246 0.04251928 5 0.762688 0.7274840 0.0352043 2.4736e-01 6.4353e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.9156e-01 7.6010e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03659752 5.5289e-01 lowCoverage 1.0000e+00 lowCoverage 0.855618 0.851794 0.00492247 4 0.688614 0.808500 -0.1198862 8.2313e-01 3.8630e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.6621e-01 3.2090e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.03779171 3.7114e-01 lowCoverage 1.000000 lowCoverage 0.797654 0.851562 -0.0413085 4 0.6934195 0.784563 -0.09114349 9.7422e-01 1.9798e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.4680e-01 4.1800e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0011942 9.8423e-01 lowCoverage 1.0000e+00 lowCoverage chr17 71185850 71186850 51247 SAP30BP ENSG00000161526 0.91214 220 8 0.847100 360 9 0.744348 86 7 0.956803 186 7 0.666667 52 5 0.949101 570 9 0.4500000 36 3 0.862609 303 9 0.714572 88 8 0.847222 85 5 0.790565 442 9 0.4523810 19 2 0.974369 254 7 0.931354 150 8 0.817509 126 7 0.7708333 13 1 0.351852 14 0 0.989418 271 8 0.882173 438 8 0.794270 240 9 0.945421 81 8 0.961993 127 8 0.850636 98 7 0.835780 148 10 0.946023 59 5 0.968096 390 9 0.807937 128 8 0.622768 55 3 0.962060 262 8 0.933196 404 9 0.886951 496 9 0.931507 329 9 0.8686931 208 9 0.6362228 95 8 0.64950712 116 4 0.5000000 2 0 0.792893 163 9 0.8557323 325 9 0.798860 62 3 0.872455 192 8 0.983936 118 5 0.787290 55 3 0.928490 113 7 0.9305537 0.8181278 0.786828 0.939066 0.9151235 0.953586 0.703086 0.9606395 0.9575702 0.8978909 0.8848191 0.5833393 0.9527320 0.911979 0.9184337 0.8358018 0.492628 0.9863316 0.9809445 0.927488 0.902279 0.9724099 0.897181 0.905519 0.8762626 0.9494138 0.835024 0.657030 0.9307102 0.9470478 0.9311867 0.913372 0.9394754 0.5398374 0.5012751 NA 0.899917 0.95318375 0.9664767 0.9551321 0.9620035 0.897746 0.951757 2 0.915760 0.923166 -0.00646370 8 0.699117 0.864325 -0.16520835 0.9625376 2.1198e-01 insignificant 1.00000 1.000000 insignificant 0.9546803 0.16230422 insignificant 1 1.00000 insignificant -0.1024330 0.0483359 weaklyHypometh 1 insignificant 0.915992 0.845985 6.2604e-02 8 0.762673 0.7862006 -0.0235278 2.8281e-01 7.2209e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.3072e-01 3.3782e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0680897 3.6652e-01 insignificant 1.0000e+00 insignificant 0.916224 0.950000 -0.0372646 5 0.762673 0.799561 -0.03688795 9.5426e-01 9.5613e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9223e-01 1.3479e-03 weaklyHypometh 1.0000e+00 2.5148e-01 insignificant -0.08894181 1.2936e-01 insignificant 1.0000e+00 insignificant 0.923824 0.845985 0.06690683 9 0.897446 0.7862006 0.1112449 1.4280e-01 7.1596e-01 insignificant 9.0381e-01 1.0000e+00 insignificant 3.0883e-01 6.6017e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.17052263 3.4655e-02 weaklyHypermeth 4.3867e-01 insignificant 0.923107 0.950000 -0.03255039 5 0.851991 0.799561 0.0524303 8.0697e-01 1.2014e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.5991e-01 1.5004e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 0.01349116 7.8190e-01 insignificant 1.000000 insignificant 0.846748 0.951763 -0.1140199 5 0.8148207 0.879517 -0.06469615 9.8574e-01 1.2346e-01 insignificant 1.0000e+00 8.4563e-01 insignificant 9.9919e-01 7.4496e-02 insignificant 1.0000e+00 6.4221e-01 insignificant -0.1570315 5.5501e-02 insignificant 6.3263e-01 insignificant chr17 71260950 71261950 51254 ITGB4 ENSG00000132470 0.10818 2275 61 0.093909 2306 61 0.126142 2691 61 0.079575 1937 57 0.125776 1531 60 0.159562 4572 61 0.1056391 2697 61 0.099287 2352 61 0.138333 3331 60 0.186767 3293 61 0.142326 2174 61 0.0858880 2846 60 0.122743 3001 61 0.184714 1010 29 0.136680 3152 60 0.0947408 2189 60 0.063887 3386 60 0.099030 2514 57 0.107244 2424 61 0.111352 2223 60 0.158531 684 55 0.069718 1512 49 0.153876 2143 61 0.064021 1323 58 0.121864 1411 47 0.141686 3159 61 0.079393 1590 59 0.088032 978 53 0.135063 2026 61 0.086959 3274 61 0.107006 3929 61 0.202595 2715 60 0.0263056 2316 60 0.0185080 1755 61 0.06200000 554 31 0.0133065 941 55 0.058215 964 52 0.0066458 2872 61 0.105080 2489 60 0.104220 2558 61 0.106399 1789 54 0.118057 2365 56 0.155740 2159 56 0.1159196 0.1053487 0.126795 0.090476 0.1401001 0.119164 0.121750 0.1183643 0.1151594 0.1574990 0.1599757 0.1038390 0.1334316 0.129062 0.1199289 0.0990544 0.072118 0.1009368 0.1211225 0.135771 0.160780 0.0681764 0.105042 0.081140 0.1075692 0.1595987 0.084829 0.081187 0.1231105 0.1044750 0.1241358 0.151479 0.0047318 0.0148428 0.0528939 0.00418814 0.027409 0.00682235 0.1338215 0.1114502 0.1112178 0.123197 0.136908 49 0.110276 0.119604 0.00135120 61 0.154293 0.141663 0.01263021 0.2774297 9.2353e-01 insignificant 1.00000 1.000000 insignificant 0.0147564 0.99990386 weaklyHypermeth 1 1.00000 insignificant 0.0011937 0.9339240 insignificant 1 insignificant 0.110154 0.019251 1.0492e-01 61 0.119759 0.0367023 0.0830568 1.6614e-78 1.0000e+00 weaklyHypermeth 4.1536e-76 1.0000e+00 weaklyHypermeth 4.6940e-43 1.0000e+00 weaklyHypermeth 4.6940e-40 1.0000e+00 weaklyHypermeth 0.0877587 1.3516e-05 weaklyHypermeth 6.4362e-04 weaklyHypermeth 0.110006 0.108715 0.0039607 56 0.103405 0.117935 -0.01452960 7.1907e-02 1.8816e-07 inconclusive 9.9870e-01 6.2721e-05 inconclusive 6.6325e-02 1.5089e-03 inconclusive 1.0000e+00 2.5148e-01 insignificant 0.00068959 9.5612e-01 insignificant 1.0000e+00 insignificant 0.119434 0.019049 0.11225317 61 0.118528 0.0278476 0.0906803 8.7102e-46 1.0000e+00 weaklyHypermeth 1.4517e-43 1.0000e+00 weaklyHypermeth 1.1853e-28 1.0000e+00 weaklyHypermeth 1.1853e-25 1.0000e+00 weaklyHypermeth 0.08656497 4.6394e-05 weaklyHypermeth 2.1088e-03 weaklyHypermeth 0.119263 0.108715 -0.00034858 56 0.104739 0.117935 -0.0131959 7.8665e-01 1.2919e-05 weaklyHypometh 1.0000e+00 4.3064e-03 weaklyHypometh 9.8771e-01 1.6787e-04 weaklyHypometh 1.0000e+00 7.9365e-02 weaklyHypometh -0.00050413 9.7475e-01 insignificant 1.000000 insignificant 0.018954 0.108518 -0.1006385 56 0.0216792 0.113004 -0.09132464 1.0000e+00 2.1982e-55 weaklyHypometh 1.0000e+00 2.1982e-52 weaklyHypometh 1.0000e+00 3.5233e-24 weaklyHypometh 1.0000e+00 3.5233e-21 weaklyHypometh -0.0870691 1.4431e-04 weaklyHypometh 1.2025e-02 weaklyHypometh chr17 71353650 71354650 51256 UNC13D ENSG00000092929 0.78402 312 7 0.918732 259 14 0.860764 361 12 0.912022 372 10 0.721451 267 13 0.931449 794 13 0.7899495 301 13 0.956484 359 13 0.852959 255 12 0.837596 286 12 0.858773 478 13 0.8223473 235 13 0.843637 315 12 0.816096 228 9 0.892479 317 12 0.8944122 167 11 0.978409 61 4 0.898803 511 9 0.823063 648 10 0.955734 377 10 0.706252 178 12 0.972777 141 7 0.811100 282 11 0.770856 187 12 0.952881 260 6 0.877709 325 13 0.740897 309 10 0.811439 151 12 0.959506 192 10 0.849312 277 13 0.739982 431 13 0.882884 358 13 0.7755711 274 13 0.9061522 362 11 0.83671329 286 8 0.9492337 78 3 0.690609 276 14 0.9464502 343 12 0.815938 301 7 0.764676 327 10 0.798972 323 8 0.852974 542 7 0.781849 286 10 0.9217845 0.9044794 0.878295 0.934466 0.8750881 0.925892 0.895514 0.9203577 0.8926332 0.9523953 0.9094685 0.8800838 0.9291925 0.909424 0.9122689 0.8770057 0.953831 0.9079131 0.9298416 0.961778 0.857347 0.9239186 0.918572 0.875507 0.9012098 0.9414872 0.915281 0.949063 0.9218862 0.9151826 0.8856312 0.961933 0.8112125 0.9129913 0.7920744 0.91285752 0.817017 0.95232327 0.9441632 0.9086108 0.8955494 0.875018 0.923336 6 0.917814 0.910061 0.00244282 12 0.827379 0.759492 0.06788723 0.3045930 7.5562e-01 insignificant 1.00000 1.000000 insignificant 0.6174491 0.51497298 insignificant 1 1.00000 insignificant 0.0278260 0.3694614 insignificant 1 insignificant 0.917270 0.858467 5.5374e-02 12 0.777379 0.7104679 0.0669112 7.7354e-03 9.1327e-01 weaklyHypermeth 6.3929e-02 1.0000e+00 weaklyHypermeth 8.7131e-01 4.4939e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0166706 7.2136e-01 insignificant 1.0000e+00 insignificant 0.917222 0.881956 0.0138314 8 0.765662 0.752321 0.01334086 4.8226e-02 7.4283e-01 weaklyHypermeth 7.5352e-01 1.0000e+00 insignificant 9.7476e-01 6.4276e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.06457733 9.3522e-03 weaklyHypermeth 3.2053e-01 insignificant 0.910032 0.858998 0.05334196 13 0.746834 0.7478609 -0.0010274 1.0714e-01 8.2520e-01 insignificant 6.9572e-01 1.0000e+00 insignificant 8.9674e-01 5.2646e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01115540 8.2768e-01 insignificant 1.0000e+00 insignificant 0.910298 0.882452 0.01669688 8 0.760547 0.794117 -0.0335705 1.8632e-01 7.8372e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4000e-01 5.7541e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03675130 2.4635e-01 insignificant 1.000000 insignificant 0.858824 0.881956 -0.0256635 8 0.7127732 0.752321 -0.03954815 7.6237e-01 6.9453e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.6170e-01 9.5039e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0479067 3.2489e-01 insignificant 1.0000e+00 insignificant chr17 71402150 71403150 51257 TRIM47 ENSG00000132481 0.67590 134 9 0.687555 172 8 0.731473 137 9 0.766658 142 7 0.758333 75 5 0.701185 349 9 0.6531205 141 4 0.692105 145 10 0.635324 140 7 0.805961 123 7 0.746584 234 10 0.7357955 60 3 0.791008 166 9 0.614727 77 5 0.792087 104 9 0.6574074 52 4 0.785714 11 0 0.700026 144 5 0.765810 223 6 0.782558 223 9 0.707488 88 8 0.761746 69 5 0.742065 137 8 0.681061 98 7 0.955000 41 2 0.862564 285 10 0.639087 130 7 0.853030 88 6 0.696690 205 8 0.743398 247 10 0.664267 324 10 0.718139 293 9 0.4903863 170 8 0.4976659 127 7 0.68522727 148 9 0.5000000 19 1 0.421774 213 7 0.5376690 240 9 0.767352 138 7 0.742890 142 7 0.844922 78 5 0.752431 82 6 0.696007 96 4 0.7657354 0.6651463 0.777526 0.892883 0.6766983 0.786020 0.824685 0.7250920 0.7236449 0.7936362 0.7812698 0.6144379 0.7456893 0.691662 0.7757205 0.7117385 0.818769 0.7778773 0.7265485 0.791792 0.753097 0.7081923 0.818434 0.657425 0.9018957 0.8150127 0.607585 0.940078 0.7816706 0.7903010 0.7072337 0.710865 0.4921254 0.4188949 0.6991598 0.49275935 0.425722 0.48874271 0.8488834 0.7656954 0.8409039 0.817733 0.785219 3 0.757013 0.744638 -0.00655092 9 0.732846 0.751225 -0.01837859 0.9239326 3.1906e-01 insignificant 1.00000 1.000000 insignificant 0.7441058 0.21422502 insignificant 1 1.00000 insignificant -0.0280782 0.3607988 insignificant 1 insignificant 0.757013 0.380589 3.1272e-01 8 0.732846 0.5587743 0.1740721 3.0925e-20 9.9737e-01 hypermethylated 9.3712e-19 1.0000e+00 hypermethylated 5.3622e-06 9.8244e-01 hypermethylated 1.2767e-04 1.0000e+00 hypermethylated 0.2018460 1.5872e-03 weaklyHypermeth 4.1769e-02 weaklyHypermeth 0.757013 0.796642 -0.0398166 6 0.732846 0.741729 -0.00888255 9.5340e-01 3.0991e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9340e-01 1.0886e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03675374 2.2528e-01 insignificant 1.0000e+00 insignificant 0.744638 0.380589 0.34237523 8 0.751225 0.5587743 0.1924507 2.7422e-19 9.9988e-01 hypermethylated 9.7934e-18 1.0000e+00 hypermethylated 2.6750e-06 9.9977e-01 hypermethylated 7.6429e-05 1.0000e+00 hypermethylated 0.22992411 3.7808e-04 hypermethylated 1.3037e-02 hypermethylated 0.744638 0.796642 -0.03457989 6 0.751225 0.741729 0.0094960 8.4154e-01 5.0705e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4132e-01 3.5639e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00867559 8.1431e-01 insignificant 1.000000 insignificant 0.380589 0.796642 -0.3221622 5 0.5587743 0.741729 -0.18295464 9.9782e-01 3.6462e-08 hypomethylated 1.0000e+00 1.1049e-06 hypomethylated 9.9983e-01 3.1877e-03 weaklyHypometh 1.0000e+00 6.3753e-02 weaklyHypometh -0.2385997 4.8953e-04 hypomethylated 3.5457e-02 hypomethylated chr17 71702350 71703350 51266 FOXJ1 ENSG00000129654 0.76893 134 5 0.680219 91 5 0.845455 29 3 0.787138 105 5 0.657576 43 3 0.562004 69 4 0.8000000 59 5 0.698643 76 5 0.708333 31 3 0.499008 24 3 0.746923 110 5 0.6980952 20 2 0.494122 59 5 0.754167 27 1 0.735714 38 3 0.8666667 11 2 1.000000 16 2 0.719011 237 5 0.903935 64 5 0.771547 53 4 0.583333 18 2 1.000000 6 0 0.711111 57 5 0.705159 43 5 0.864241 82 2 0.769608 69 5 0.843810 38 3 1.000000 19 2 0.736199 106 5 0.684665 78 5 0.721429 65 5 0.599702 61 5 0.6962363 102 5 0.7403846 71 4 0.62526316 87 5 0.7777778 16 2 0.651282 52 5 0.7330769 70 5 0.888790 93 4 0.747043 88 4 0.753996 111 5 0.643750 131 2 0.661463 97 4 0.7876624 0.7172299 0.885167 0.751843 0.7275718 0.762531 0.736842 0.7329126 0.7872807 0.6076128 0.8399022 0.7984336 0.8237155 0.561404 0.8063910 0.8143549 0.961977 0.7904903 0.8608674 0.755577 0.804593 0.9665851 0.741646 0.723188 0.8313203 0.8330753 0.769173 1.000000 0.7872563 0.6575927 0.7922932 0.653195 0.7835029 0.6609312 0.6581256 0.81509171 0.798246 0.78871457 0.8158417 0.8271081 0.7887825 0.810965 0.713082 2 0.745946 0.750779 -0.00506875 5 0.715128 0.656630 0.05849827 0.3880961 7.4383e-01 insignificant 1.00000 1.000000 insignificant 0.5633629 0.55471469 insignificant 1 1.00000 insignificant -0.0333971 0.4943543 lowCoverage 1 lowCoverage 0.745946 0.713568 3.4922e-02 5 0.715128 0.7949740 -0.0798461 7.9445e-02 6.2979e-01 insignificant 5.1925e-01 1.0000e+00 insignificant 1.1837e-01 8.5413e-01 insignificant 9.1051e-01 1.0000e+00 insignificant 0.0308709 4.0785e-01 lowCoverage 1.0000e+00 lowCoverage 0.745946 0.794231 -0.0276522 4 0.715128 0.727262 -0.01213372 7.6802e-01 2.7235e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.2536e-01 3.3807e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.00413412 9.3823e-01 lowCoverage 1.0000e+00 lowCoverage 0.750779 0.713568 0.05552842 5 0.656630 0.7949740 -0.1383444 7.9493e-03 5.4192e-01 weaklyHypermeth 6.5696e-02 1.0000e+00 weaklyHypermeth 8.9388e-03 8.3270e-01 weaklyHypermeth 1.0770e-01 1.0000e+00 insignificant 0.06426798 1.7894e-01 lowCoverage 1.0000e+00 lowCoverage 0.750779 0.794231 -0.02965342 4 0.656630 0.727262 -0.0706320 9.3780e-01 6.5311e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.8120e-01 4.3094e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.02926301 6.2723e-01 lowCoverage 1.000000 lowCoverage 0.713568 0.794231 -0.0754329 4 0.7949740 0.727262 0.06771237 8.6809e-01 2.6950e-02 lowCoverage 1.0000e+00 2.3034e-01 lowCoverage 9.6234e-01 7.3275e-02 lowCoverage 1.0000e+00 6.4221e-01 lowCoverage -0.0350050 5.0453e-01 lowCoverage 1.0000e+00 lowCoverage chr17 72053550 72054550 51281 PRCD ENSG00000214140 0.93577 245 5 0.882566 217 5 0.935786 163 5 0.858815 282 5 0.819156 74 5 0.922393 539 5 0.9268380 130 5 0.923427 151 5 0.682734 157 5 0.712217 125 5 0.760033 197 5 0.9484848 58 5 0.772287 140 5 0.914856 103 5 0.899150 189 5 0.9250000 60 5 0.904762 21 3 0.841995 228 5 0.891644 244 5 0.900799 254 5 0.904945 65 5 0.785714 30 3 0.919447 157 5 0.859954 126 5 0.956731 43 3 0.896408 235 5 0.840110 67 5 0.842128 90 4 0.906833 184 5 0.873022 264 5 0.905763 404 5 0.923615 274 5 0.9273585 188 5 0.9582237 112 5 0.79245283 106 3 0.8888889 8 0 0.954185 179 5 0.9250423 252 5 0.811946 153 5 0.865682 168 5 0.847012 120 5 0.823144 152 5 0.765495 171 5 0.9491284 0.8708496 0.944002 0.871452 0.8389232 0.927056 0.933351 0.9182820 0.8361333 0.8567167 0.8974765 0.9392468 0.7925433 0.922911 0.9171093 0.9417476 0.874935 0.8726676 0.8994967 0.906435 0.925304 0.8252427 0.913386 0.892782 0.9495892 0.8944366 0.827363 0.864120 0.9217161 0.8782519 0.9075317 0.928591 0.9399386 0.9565023 0.7283689 0.93032357 0.956364 0.92002986 0.8260258 0.8732293 0.8466194 0.849598 0.793763 4 0.904868 0.887571 0.00814215 5 0.898169 0.888372 0.00979680 0.4088808 7.5312e-01 insignificant 1.00000 1.000000 insignificant 0.6606737 0.12304403 insignificant 1 1.00000 insignificant -0.0166203 0.4579635 lowCoverage 1 lowCoverage 0.904868 0.914793 -1.0750e-02 5 0.898169 0.9201908 -0.0220222 4.1808e-01 4.2618e-03 weaklyHypometh 1.0000e+00 3.8744e-01 insignificant 9.9788e-01 5.7573e-04 weaklyHypometh 1.0000e+00 7.1966e-02 weaklyHypometh -0.0397563 2.2351e-01 lowCoverage 1.0000e+00 lowCoverage 0.904868 0.827225 0.0730189 5 0.898169 0.823255 0.07491332 2.6689e-05 4.8975e-01 weaklyHypermeth 8.3403e-04 1.0000e+00 weaklyHypermeth 5.5419e-03 5.9660e-01 weaklyHypermeth 1.4584e-01 1.0000e+00 insignificant 0.04528001 8.6201e-02 lowCoverage 1.0000e+00 lowCoverage 0.887571 0.914793 -0.03014599 5 0.888372 0.9201908 -0.0318190 8.0601e-01 1.4180e-04 weaklyHypometh 1.0000e+00 1.7725e-02 weaklyHypometh 9.9473e-01 1.9467e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.02313604 4.4113e-01 lowCoverage 1.0000e+00 lowCoverage 0.887571 0.827225 0.06823266 5 0.888372 0.823255 0.0651165 1.8381e-04 8.5571e-01 weaklyHypermeth 5.2517e-03 1.0000e+00 weaklyHypermeth 2.4954e-03 9.3176e-01 weaklyHypermeth 9.9815e-02 1.0000e+00 weaklyHypermeth 0.06190028 1.8654e-02 lowCoverage 0.631573 lowCoverage 0.914793 0.827225 0.1015422 5 0.9201908 0.823255 0.09693549 1.9756e-04 9.1197e-01 weaklyHypermeth 3.2926e-02 1.0000e+00 weaklyHypermeth 1.1724e-03 9.9693e-01 weaklyHypermeth 2.8484e-01 1.0000e+00 insignificant 0.0850363 2.2245e-02 lowCoverage 3.5946e-01 lowCoverage chr17 72166750 72167750 51288 ENSG00000199735 0.55714 38 2 0.616230 88 7 0.337245 60 6 0.500000 24 1 0.469444 24 2 0.849524 123 4 0.6625850 38 5 0.800590 79 7 0.604592 39 3 0.904582 36 3 0.845861 237 7 0.5329870 33 5 0.663165 142 6 1.000000 13 1 0.838263 61 6 0.6333333 23 2 0.520833 43 5 0.646867 52 5 0.722086 208 7 0.978655 66 2 0.689796 69 7 0.703297 22 1 0.507483 45 6 0.762245 47 2 1.000000 14 2 0.606933 102 7 0.793012 54 7 0.837302 22 1 0.561730 81 4 0.764770 116 7 0.676198 155 7 0.591852 103 6 0.3086309 142 7 0.4068193 145 6 0.66666667 21 2 0.7500000 7 0 0.436150 75 4 0.6753723 76 4 0.391667 13 1 0.669444 52 6 0.583333 19 1 0.500000 15 1 0.833333 16 1 0.6418252 0.6482518 0.461990 0.642857 0.6333800 0.840317 0.726757 0.8208715 0.6743197 0.8265693 0.8762875 0.7197297 0.7589869 NA 0.9409764 0.7380952 0.659402 0.7153300 0.7887315 0.973810 0.670068 0.8498168 0.616780 0.804252 0.8206486 0.7120341 0.790208 0.842971 0.5873169 0.8580651 0.7828025 0.751275 0.5136166 0.5056827 0.6809524 0.90889876 0.549938 0.72409910 0.4511905 0.7951389 0.7023810 0.642857 0.715278 0 0.758234 0.750602 0.01380469 7 0.703941 0.690022 0.01391958 0.4400744 7.4151e-01 insignificant 1.00000 1.000000 insignificant 0.4631596 0.63812527 insignificant 1 1.00000 insignificant -0.0236855 0.6754250 lowCoverage 1 lowCoverage 0.758234 0.454936 2.4672e-01 7 0.703941 0.4020090 0.3019322 4.4647e-12 9.9874e-01 hypermethylated 8.7544e-11 1.0000e+00 hypermethylated 2.0019e-02 9.8194e-01 weaklyHypermeth 2.1526e-01 1.0000e+00 insignificant 0.1435928 1.2224e-01 lowCoverage 1.0000e+00 lowCoverage 0.758234 0.713043 0.0582728 1 0.703941 0.619155 0.08478609 1.1229e-01 9.5469e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 1.8460e-01 8.1980e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.08864370 3.3495e-01 lowCoverage 1.0000e+00 lowCoverage 0.750602 0.454936 0.22349893 7 0.690022 0.4020090 0.2880126 3.5865e-12 9.8422e-01 hypermethylated 8.5394e-11 1.0000e+00 hypermethylated 5.1275e-02 9.0261e-01 insignificant 4.3453e-01 1.0000e+00 insignificant 0.16727827 7.8601e-02 lowCoverage 7.6311e-01 lowCoverage 0.750602 0.713043 0.04694711 1 0.690022 0.619155 0.0708665 1.5155e-01 9.3167e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 2.3665e-01 7.8365e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.11232916 2.3082e-01 lowCoverage 1.000000 lowCoverage 0.454936 0.713043 -0.1420206 1 0.4020090 0.619155 -0.21714611 9.9152e-01 1.1823e-03 lowCoverage 1.0000e+00 1.6195e-02 lowCoverage 8.0717e-01 5.7286e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0549491 6.1312e-01 lowCoverage 1.0000e+00 lowCoverage chr17 72167350 72168350 51289 ENSG00000199735 0.33333 5 0 0.558889 40 5 0.212143 48 5 0.250000 4 0 0.363333 18 1 0.833333 18 2 0.6976190 25 3 0.748413 40 5 0.575000 30 2 0.941414 26 2 0.804997 145 5 0.5329870 33 5 0.578431 111 5 NA 0 0 0.773568 48 5 0.5750000 18 2 0.625000 42 5 0.526667 29 4 0.627941 107 5 1.000000 7 0 0.632381 41 5 0.600000 5 0 0.405714 35 5 0.750000 18 0 NA 0 0 0.492231 52 5 0.778788 42 5 0.791667 12 0 0.440476 39 2 0.694720 61 5 0.572727 90 5 0.456643 49 4 0.1278704 90 5 0.2028803 137 5 0.50000000 19 2 0.7000000 6 0 0.308791 33 2 0.6071429 34 2 0.250000 4 0 0.628333 36 5 0.375000 5 0 0.250000 6 0 0.666667 6 0 0.4299758 0.4986111 0.165179 0.250000 0.2875000 0.791667 0.788690 0.7410714 0.5625000 0.9545455 0.7999958 0.5590909 0.5563725 NA 0.8760504 0.5750000 0.625000 0.4916667 0.6286765 1.000000 0.540476 0.7500000 0.400000 0.812500 NA 0.4902882 0.765152 0.791667 0.3630952 0.7612573 0.6117424 0.570804 0.1129630 0.1036004 0.3300000 0.87500000 0.232143 0.56250000 0.2500000 0.6916667 0.3750000 0.250000 0.402083 0 0.649874 0.628378 0.02136949 5 0.631235 0.607245 0.02399026 0.3482034 7.5578e-01 insignificant 1.00000 1.000000 insignificant 0.4604223 0.57925669 insignificant 1 1.00000 insignificant 0.0069242 0.9164153 lowCoverage 1 lowCoverage 0.649874 0.272727 3.7303e-01 5 0.631235 0.2477658 0.3834695 1.0149e-11 1.0000e+00 hypermethylated 1.9149e-10 1.0000e+00 hypermethylated 4.9269e-03 9.9963e-01 weaklyHypermeth 6.5692e-02 1.0000e+00 weaklyHypermeth 0.2005386 9.5414e-02 lowCoverage 9.1745e-01 lowCoverage 0.649874 0.508772 0.1369939 0 0.631235 0.502020 0.12921509 4.2696e-02 9.9308e-01 noCoverage 6.7771e-01 1.0000e+00 noCoverage 6.1449e-02 9.9025e-01 noCoverage 1.0000e+00 1.0000e+00 noCoverage 0.17431937 1.3694e-01 lowCoverage 1.0000e+00 lowCoverage 0.628378 0.272727 0.34476975 5 0.607245 0.2477658 0.3594792 2.9028e-10 9.9888e-01 hypermethylated 6.1762e-09 1.0000e+00 hypermethylated 1.9239e-02 9.7049e-01 weaklyHypermeth 2.0467e-01 1.0000e+00 insignificant 0.19361442 1.0131e-01 lowCoverage 9.3801e-01 lowCoverage 0.628378 0.508772 0.12052827 0 0.607245 0.502020 0.1052248 6.8882e-02 9.7542e-01 noCoverage 9.0634e-01 1.0000e+00 noCoverage 8.0235e-02 9.8838e-01 noCoverage 1.0000e+00 1.0000e+00 noCoverage 0.16739521 1.4565e-01 lowCoverage 1.000000 lowCoverage 0.272727 0.508772 -0.2450587 0 0.2477658 0.502020 -0.25425438 9.8498e-01 4.0138e-03 noCoverage 1.0000e+00 4.8234e-02 noCoverage 6.0011e-01 6.7226e-01 noCoverage 1.0000e+00 1.0000e+00 noCoverage -0.0262192 8.4488e-01 lowCoverage 1.0000e+00 lowCoverage chr17 72632350 72633350 51300 ENSG00000203314 0.87064 165 7 0.623838 118 6 0.526655 106 6 0.739174 106 7 0.917834 65 5 0.781096 347 8 0.7197685 122 6 0.805411 94 7 0.909600 94 6 0.833333 66 6 0.828108 159 7 0.8404040 57 5 0.722751 106 6 NA 0 0 0.798295 106 5 0.8711844 59 5 0.885391 84 5 0.740783 116 10 0.808580 117 8 0.825944 254 9 0.918311 60 5 0.700871 80 4 0.707249 101 7 0.661250 55 4 0.825000 29 3 0.779580 121 8 0.658078 78 5 0.926020 50 5 0.747354 77 5 0.881055 146 8 0.846035 165 8 0.740189 350 10 0.8777814 107 7 0.7472874 95 6 0.70488285 152 6 0.3895726 67 6 0.795883 78 5 0.5351515 134 8 0.897920 156 7 0.757079 138 7 0.883333 111 7 0.829469 120 5 0.871491 110 7 0.8247495 0.7355235 0.667628 0.753098 0.9031863 0.876063 0.759049 0.8510240 0.8220009 0.8605769 0.8246616 0.7336538 0.8161401 NA 0.8717601 0.8731050 0.852730 0.6870720 0.8008858 0.847026 0.900277 0.8081448 0.845594 0.797236 0.8401442 0.7260198 0.881817 0.910027 0.7646520 0.8548037 0.8041094 0.871592 0.8110281 0.7053594 0.6965744 0.60195595 0.810660 0.63679487 0.8825385 0.8809458 0.8176129 0.831771 0.888995 4 0.824434 0.834604 -0.00785064 7 0.803990 0.714217 0.08977276 0.0947161 5.9105e-01 insignificant 1.00000 1.000000 insignificant 0.3360510 0.41458491 insignificant 1 1.00000 insignificant 0.0094588 0.7922981 insignificant 1 insignificant 0.824434 0.690363 1.2442e-01 6 0.803990 0.6224297 0.1815602 3.5986e-06 9.9951e-01 weaklyHypermeth 5.1408e-05 1.0000e+00 weaklyHypermeth 7.4817e-04 9.9996e-01 weaklyHypermeth 1.1876e-02 1.0000e+00 weaklyHypermeth 0.1169485 1.8008e-01 insignificant 1.0000e+00 insignificant 0.823983 0.867717 -0.0488962 6 0.784389 0.845306 -0.06091677 9.9656e-01 2.5732e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.8842e-01 3.0817e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.05581697 1.2735e-01 insignificant 1.0000e+00 insignificant 0.834604 0.690363 0.13885001 6 0.714217 0.6224297 0.0917874 2.9565e-06 9.8772e-01 weaklyHypermeth 4.6196e-05 1.0000e+00 weaklyHypermeth 1.5649e-03 9.9949e-01 weaklyHypermeth 2.3013e-02 1.0000e+00 weaklyHypermeth 0.10748971 2.1760e-01 insignificant 1.0000e+00 insignificant 0.835115 0.867717 -0.03085456 6 0.735639 0.845306 -0.1096668 9.9245e-01 2.1227e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.7090e-01 1.8396e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.06527572 1.0580e-01 insignificant 1.000000 insignificant 0.689873 0.867717 -0.1836458 7 0.5846727 0.845306 -0.26063294 9.9999e-01 1.4668e-04 weaklyHypometh 1.0000e+00 2.7675e-03 weaklyHypometh 1.0000e+00 5.5205e-04 weaklyHypometh 1.0000e+00 1.6237e-02 weaklyHypometh -0.1727654 6.7422e-02 insignificant 7.0231e-01 insignificant chr17 72762750 72763750 51306 ENSG00000211400 0.64871 234 8 0.540456 137 9 0.550640 201 9 0.566310 228 8 0.581387 92 7 0.639902 396 9 0.6826628 120 7 0.506510 181 8 0.590891 123 8 0.719366 123 8 0.764706 176 8 0.2995980 78 6 0.353263 176 8 NA 0 0 0.427529 139 8 0.4344156 53 3 0.353056 157 8 0.441066 254 8 0.407542 242 8 0.532963 242 8 0.623786 93 8 0.140567 181 8 0.670350 212 8 0.622147 75 6 0.284287 111 7 0.444783 287 8 0.585026 110 8 0.253125 45 6 0.403074 164 7 0.451393 261 9 0.481577 411 9 0.796960 371 8 0.1621557 188 9 0.1163043 154 8 0.33333333 88 5 0.0214286 148 8 0.128968 69 6 0.0849247 245 9 0.254228 275 9 0.209089 331 8 0.263529 200 8 0.238949 318 8 0.393480 312 7 0.5647934 0.4976352 0.539242 0.528359 0.6097273 0.540078 0.692376 0.4811644 0.5790600 0.6691065 0.7378231 0.3725214 0.3646087 NA 0.4160110 0.3900394 0.324451 0.4038451 0.3550758 0.429246 0.571757 0.1126447 0.668392 0.566023 0.2725873 0.4128592 0.554654 0.277460 0.5009683 0.4339801 0.4877208 0.763427 0.0644282 0.0419600 0.0317460 0.01414966 0.076291 0.02366522 0.1875688 0.1344613 0.2104303 0.178128 0.385611 6 0.502088 0.515295 -0.01283235 8 0.537342 0.524746 0.01259589 0.5957386 6.0120e-01 insignificant 1.00000 1.000000 insignificant 0.3074183 0.89855226 insignificant 1 1.00000 insignificant 0.0487159 0.4480805 insignificant 1 insignificant 0.502088 0.085202 4.5040e-01 8 0.537342 0.1244636 0.4128785 3.0509e-37 1.0000e+00 hypermethylated 2.5425e-35 1.0000e+00 hypermethylated 3.4458e-17 9.9999e-01 hypermethylated 3.1326e-15 1.0000e+00 hypermethylated 0.3872863 1.9630e-05 hypermethylated 7.9534e-04 hypermethylated 0.502088 0.204039 0.2812028 8 0.537342 0.277336 0.26000594 4.6389e-17 1.0000e+00 hypermethylated 5.7987e-15 1.0000e+00 hypermethylated 9.0251e-12 1.0000e+00 hypermethylated 2.2563e-09 1.0000e+00 hypermethylated 0.25661701 7.1813e-05 hypermethylated 1.7953e-02 hypermethylated 0.515295 0.085202 0.43761415 8 0.524746 0.1244636 0.4002826 3.2828e-21 9.9998e-01 hypermethylated 1.2626e-19 1.0000e+00 hypermethylated 2.9712e-12 9.9880e-01 hypermethylated 1.8570e-10 1.0000e+00 hypermethylated 0.33857040 1.9196e-04 hypermethylated 7.6785e-03 hypermethylated 0.515295 0.204039 0.28494939 8 0.524746 0.277336 0.2474100 4.5116e-10 9.9828e-01 hypermethylated 4.5116e-08 1.0000e+00 hypermethylated 8.7963e-07 9.9985e-01 hypermethylated 7.9966e-05 1.0000e+00 hypermethylated 0.20790111 5.2182e-03 weaklyHypermeth 0.372730 insignificant 0.085202 0.204039 -0.1673622 8 0.1244636 0.277336 -0.15287252 9.9752e-01 3.7365e-11 weaklyHypometh 1.0000e+00 1.4371e-09 weaklyHypometh 9.9665e-01 7.3841e-08 weaklyHypometh 1.0000e+00 4.9228e-06 weaklyHypometh -0.1306693 3.8139e-02 weaklyHypometh 4.8896e-01 insignificant chr17 72832450 72833450 51307 SEPT9 ENSG00000184640 0.84135 227 9 0.787479 216 9 0.777062 235 9 0.912064 180 6 0.891610 181 9 0.903224 430 9 0.8601857 277 9 0.727120 166 9 0.762046 263 9 0.818515 213 9 0.868139 288 9 0.8242086 235 9 0.765098 265 9 0.893750 35 4 0.799394 250 9 0.9015301 236 7 0.829434 346 7 0.567144 240 9 0.873527 300 9 0.830882 233 9 0.800704 178 9 0.625979 126 7 0.912082 157 9 0.930215 159 9 0.796230 120 7 0.822929 244 9 0.873859 165 9 0.912371 115 9 0.868551 152 9 0.919725 236 9 0.875485 319 9 0.897122 333 9 0.0234983 287 9 0.0125203 297 9 0.03801170 385 9 0.0227273 98 8 0.156041 146 7 0.0119048 330 9 0.836606 275 8 0.784840 238 8 0.697017 215 6 0.759380 238 8 0.811157 257 8 0.8347593 0.7916805 0.758850 0.889830 0.9027013 0.923583 0.883650 0.7357989 0.7503785 0.8177214 0.8874566 0.8231510 0.7400140 0.874071 0.7839764 0.8814617 0.838558 0.5513024 0.8475290 0.824356 0.785639 0.6132954 0.872586 0.929647 0.8546492 0.8345778 0.877418 0.921394 0.8314652 0.9022141 0.8640050 0.899859 0.0183814 0.0177597 0.0161370 0.01752505 0.088223 0.00586253 0.8659262 0.7236739 0.6928077 0.685729 0.770279 6 0.821636 0.863281 -0.04439822 9 0.821144 0.867614 -0.04646995 0.9998933 1.3208e-03 weaklyHypometh 1.00000 0.307143 insignificant 0.9995890 0.00612511 weaklyHypometh 1 1.00000 insignificant -0.0312494 0.3139459 insignificant 1 insignificant 0.821636 0.023331 8.0285e-01 9 0.821144 0.0262345 0.7949094 5.7580e-114 1.0000e+00 hypermethylated 1.9193e-111 1.0000e+00 hypermethylated 1.1692e-22 1.0000e+00 hypermethylated 1.6703e-20 1.0000e+00 hypermethylated 0.7775711 4.6650e-12 hypermethylated 7.7750e-10 hypermethylated 0.821636 0.763696 0.0576309 8 0.821144 0.779603 0.04154140 2.3772e-04 5.1946e-01 weaklyHypermeth 6.2559e-03 1.0000e+00 weaklyHypermeth 1.0523e-02 7.1482e-01 weaklyHypermeth 2.3385e-01 1.0000e+00 insignificant 0.04388819 1.7618e-01 insignificant 1.0000e+00 insignificant 0.863281 0.023331 0.84357901 9 0.867614 0.0262345 0.8413793 6.4985e-92 1.0000e+00 hypermethylated 6.4985e-89 1.0000e+00 hypermethylated 3.5297e-19 1.0000e+00 hypermethylated 5.0424e-17 1.0000e+00 hypermethylated 0.80882049 4.0372e-13 hypermethylated 4.0372e-10 hypermethylated 0.863281 0.763696 0.10108124 8 0.867614 0.779603 0.0880114 6.9974e-06 8.5223e-01 weaklyHypermeth 3.1806e-04 1.0000e+00 weaklyHypermeth 4.2875e-04 9.1060e-01 weaklyHypermeth 2.1438e-02 1.0000e+00 weaklyHypermeth 0.07513758 4.8705e-02 weaklyHypermeth 0.993983 insignificant 0.023331 0.763696 -0.7391001 8 0.0262345 0.779603 -0.75336798 1.0000e+00 4.2419e-49 hypomethylated 1.0000e+00 1.4140e-46 hypomethylated 1.0000e+00 1.7222e-13 hypomethylated 1.0000e+00 4.3054e-11 hypomethylated -0.7336829 5.2338e-09 hypomethylated 5.2338e-06 hypomethylated chr17 72896350 72897350 51310 SEPT9 ENSG00000184640 0.73595 198 9 0.735042 377 9 0.701901 359 9 0.790932 157 5 0.762234 220 9 0.882599 414 9 0.8275649 372 8 0.690628 218 8 0.796967 363 8 0.766803 282 9 0.870424 323 8 0.7233790 275 8 0.374161 409 9 0.604751 63 4 0.587141 238 8 0.9079988 183 7 0.508587 409 9 0.549574 224 6 0.613225 400 9 0.639779 296 9 0.745968 175 8 0.220999 96 3 0.824335 277 8 0.704188 162 8 0.735577 56 6 0.746315 336 8 0.810644 171 8 0.854339 164 8 0.774827 243 8 0.721073 357 8 0.515383 594 9 0.884895 317 9 0.2513293 344 8 0.1367902 278 8 0.00000000 72 4 0.4583333 21 1 0.539485 226 8 0.4019324 436 9 0.359029 225 9 0.392615 259 9 0.477405 153 6 0.230664 193 8 0.607370 137 7 0.7520333 0.7224922 0.688870 0.734860 0.7347389 0.873278 0.812768 0.6968109 0.7673567 0.7600052 0.8729703 0.6711238 0.3289115 0.680409 0.5485433 0.9310838 0.567263 0.5224578 0.5842463 0.591699 0.811097 0.2820992 0.783445 0.776395 0.6732260 0.6834436 0.768811 0.831433 0.7904191 0.6475987 0.4795460 0.893998 0.2542543 0.1100019 0.1243339 0.29844961 0.551067 0.24133099 0.3583412 0.3718587 0.3831236 0.229676 0.512167 5 0.703633 0.744573 -0.03443508 8 0.623130 0.638823 -0.01569395 0.9685475 2.3438e-01 insignificant 1.00000 1.000000 insignificant 0.9744177 0.29346107 insignificant 1 1.00000 insignificant -0.0080631 0.8951349 insignificant 1 insignificant 0.703999 0.336964 3.7909e-01 8 0.692366 0.3673329 0.3250333 2.3329e-25 9.8785e-01 hypermethylated 8.6403e-24 1.0000e+00 hypermethylated 5.8149e-10 9.9999e-01 hypermethylated 2.6431e-08 1.0000e+00 hypermethylated 0.4055038 3.4023e-03 weaklyHypermeth 7.3963e-02 weaklyHypermeth 0.703999 0.358842 0.3156909 9 0.692366 0.386115 0.30625147 2.8593e-23 1.0000e+00 hypermethylated 6.7937e-21 1.0000e+00 hypermethylated 2.2440e-11 1.0000e+00 hypermethylated 3.7400e-09 1.0000e+00 hypermethylated 0.29006545 5.8450e-03 weaklyHypermeth 2.9225e-01 insignificant 0.744825 0.336964 0.41547331 8 0.709804 0.3673329 0.3424710 1.8125e-19 9.9873e-01 hypermethylated 6.7131e-18 1.0000e+00 hypermethylated 3.0092e-08 9.9999e-01 hypermethylated 1.2037e-06 1.0000e+00 hypermethylated 0.41356694 2.3757e-03 weaklyHypermeth 5.0547e-02 weaklyHypermeth 0.744825 0.358842 0.33713307 8 0.709804 0.386115 0.3236892 1.5611e-17 1.0000e+00 hypermethylated 5.2037e-15 1.0000e+00 hypermethylated 3.0610e-08 1.0000e+00 hypermethylated 6.1219e-06 1.0000e+00 hypermethylated 0.29812860 4.5909e-03 weaklyHypermeth 0.372730 insignificant 0.336964 0.358842 -0.0681168 8 0.3673329 0.386115 -0.01878182 6.6003e-01 1.2264e-01 insignificant 1.0000e+00 8.4563e-01 insignificant 9.9273e-01 6.2595e-02 insignificant 1.0000e+00 5.7465e-01 insignificant -0.1154383 3.0015e-01 insignificant 1.0000e+00 insignificant chr17 72960750 72961750 51315 ENSG00000203307 0.88623 310 9 0.731282 491 10 0.812179 279 10 0.826399 357 9 0.757660 119 8 0.766715 622 9 0.7653901 175 9 0.804823 233 9 0.683156 165 8 0.878281 149 6 0.851292 404 9 0.6954887 88 8 0.731782 204 8 0.716337 121 5 0.770115 149 7 0.7973785 72 6 0.493227 44 2 0.708971 405 9 0.719965 364 9 0.773868 311 9 0.858657 119 8 0.672561 152 8 0.858941 197 10 0.943110 85 6 0.760953 352 9 0.744193 440 10 0.722559 134 9 0.644780 86 4 0.818693 212 9 0.859693 508 10 0.858002 725 10 0.816813 368 10 0.5473964 386 10 0.7318636 203 9 0.80128053 304 8 0.7891705 197 5 0.659324 219 9 0.8099806 400 10 0.768332 316 9 0.790239 337 9 0.680228 276 9 0.545183 296 8 0.722905 384 9 0.8336834 0.7156140 0.805074 0.886463 0.7734034 0.847770 0.873344 0.7848903 0.7309148 0.8888653 0.8127141 0.7093856 0.6341303 0.770051 0.7309181 0.6548421 0.605767 0.6934202 0.7746442 0.809226 0.889534 0.6841021 0.863288 0.925273 0.8329855 0.7837677 0.727787 0.823068 0.7956954 0.8108423 0.7950754 0.844746 0.6093165 0.6694953 0.7247399 0.75097692 0.840096 0.81092068 0.6835444 0.7443199 0.6129391 0.523569 0.710057 5 0.785220 0.825340 -0.02551965 9 0.721747 0.714186 0.00756054 0.9997232 4.2885e-02 weaklyHypometh 1.00000 1.000000 insignificant 0.7559355 0.14515302 insignificant 1 1.00000 insignificant -0.0380524 0.2442996 insignificant 1 insignificant 0.785135 0.792861 8.4192e-03 9 0.703197 0.6811604 0.0220363 6.9301e-01 2.1675e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.7171e-01 3.2092e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0353579 4.6817e-01 insignificant 1.0000e+00 insignificant 0.785319 0.664388 0.1230142 9 0.753996 0.728188 0.02580780 1.2669e-05 1.5181e-01 weaklyHypermeth 4.5247e-04 1.0000e+00 weaklyHypermeth 7.3197e-03 5.5330e-01 weaklyHypermeth 1.8768e-01 1.0000e+00 insignificant 0.05714966 2.7611e-01 insignificant 1.0000e+00 insignificant 0.825829 0.792861 0.02671957 10 0.761799 0.6811604 0.0806384 2.6670e-02 2.1446e-01 weaklyHypermeth 1.9756e-01 1.0000e+00 insignificant 9.8371e-02 3.9805e-01 insignificant 7.5399e-01 1.0000e+00 insignificant 0.07341031 1.7038e-01 insignificant 1.0000e+00 insignificant 0.826010 0.664388 0.13886000 9 0.785582 0.728188 0.0573938 8.9333e-06 6.0818e-01 weaklyHypermeth 3.7222e-04 1.0000e+00 weaklyHypermeth 4.1110e-04 9.3023e-01 weaklyHypermeth 2.1438e-02 1.0000e+00 weaklyHypermeth 0.09520209 1.0090e-01 insignificant 1.000000 insignificant 0.794827 0.664388 0.1193969 9 0.7347839 0.728188 0.00659581 1.2290e-02 5.2043e-01 weaklyHypermeth 6.8278e-01 1.0000e+00 insignificant 9.7910e-02 8.7480e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0217918 7.2690e-01 insignificant 1.0000e+00 insignificant chr17 73371050 73372050 51322 ENSG00000203307 0.78455 286 5 0.635328 155 5 0.493459 132 5 0.779450 308 5 0.550463 70 5 0.770444 319 5 0.7272727 55 5 0.650873 137 5 0.624247 160 5 0.695272 99 5 0.648721 146 5 0.4747277 71 5 0.495920 253 5 0.761818 48 5 0.482512 118 5 0.6242424 45 5 0.460303 140 5 0.606016 356 5 0.546330 140 5 0.713510 163 5 0.662202 70 5 0.253531 177 5 0.823205 136 5 0.679707 115 6 0.735017 89 5 0.614351 154 5 0.774636 81 5 0.651557 50 5 0.505342 144 5 0.640367 224 5 0.590275 251 5 0.882344 200 5 0.0872348 152 5 0.1024143 120 5 0.75000000 111 3 0.2095571 58 5 0.212786 102 6 0.2982674 210 5 0.645576 304 5 0.577513 236 5 0.504225 297 5 0.454903 305 5 0.668815 308 5 0.7774207 0.6181981 0.488125 0.768614 0.6472269 0.711999 0.726299 0.6339413 0.5258445 0.8210962 0.7802640 0.5569748 0.4759860 0.751497 0.5563255 0.6448052 0.434524 0.5925587 0.5295193 0.700081 0.765561 0.2815661 0.829922 0.654754 0.7191673 0.6045766 0.735661 0.707607 0.4939216 0.6207345 0.5753863 0.851001 0.0897306 0.1061557 0.5192889 0.19761072 0.152904 0.27581211 0.5539384 0.5513299 0.4866834 0.431208 0.644415 5 0.649172 0.638084 0.01653292 5 0.596237 0.622978 -0.02674085 0.4907489 7.3770e-01 insignificant 1.00000 1.000000 insignificant 0.8280614 0.34135716 insignificant 1 1.00000 insignificant -0.0247717 0.6460477 insignificant 1 insignificant 0.649172 0.280212 3.8111e-01 5 0.596237 0.3243356 0.2719016 3.2295e-16 9.9614e-01 hypermethylated 8.0738e-15 1.0000e+00 hypermethylated 5.4555e-09 9.7997e-01 hypermethylated 1.8185e-07 1.0000e+00 hypermethylated 0.3495630 1.6086e-02 lowCoverage 2.5753e-01 lowCoverage 0.649172 0.517241 0.1091853 5 0.596237 0.629276 -0.03303837 6.7778e-03 7.5616e-01 weaklyHypermeth 1.3556e-01 1.0000e+00 insignificant 1.6828e-02 8.3520e-01 weaklyHypermeth 3.2996e-01 1.0000e+00 insignificant 0.05606642 2.7549e-01 insignificant 1.0000e+00 insignificant 0.638084 0.280212 0.36166359 5 0.622978 0.3243356 0.2986424 3.3446e-09 9.9958e-01 hypermethylated 6.6891e-08 1.0000e+00 hypermethylated 2.4360e-07 9.9830e-01 hypermethylated 8.3999e-06 1.0000e+00 hypermethylated 0.37433473 1.0885e-02 lowCoverage 1.7854e-01 lowCoverage 0.638084 0.517241 0.08765428 5 0.622978 0.629276 -0.0062975 1.6063e-01 4.7710e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.5148e-02 7.0765e-01 weaklyHypermeth 5.3506e-01 1.0000e+00 insignificant 0.08083810 2.1535e-01 insignificant 1.000000 insignificant 0.280212 0.517241 -0.2808884 5 0.3243356 0.629276 -0.30493992 9.9962e-01 1.5673e-06 hypomethylated 1.0000e+00 4.1245e-05 hypomethylated 1.0000e+00 7.0139e-06 hypomethylated 1.0000e+00 2.9225e-04 hypomethylated -0.2934966 3.1604e-02 lowCoverage 4.3895e-01 lowCoverage chr17 73534950 73535950 51326 ENSG00000204283 0.78157 177 6 0.715666 92 5 0.758764 84 6 0.797390 85 6 0.871813 64 6 0.784573 181 6 0.7622024 77 6 0.664174 62 5 0.765138 64 5 0.631319 65 6 0.821340 129 6 0.7430556 52 6 0.756902 96 5 NA 0 0 0.745928 92 6 0.7285053 45 6 0.814459 70 6 0.849928 86 6 0.771670 100 6 0.792642 146 6 0.891667 27 4 0.944444 49 3 0.764378 128 6 0.747253 40 3 0.944444 22 1 0.722787 109 6 0.574505 43 4 0.872222 22 3 0.818483 69 6 0.830007 136 6 0.778093 152 6 0.786471 234 6 0.7129198 83 5 0.6904119 80 6 0.70949934 139 6 0.8386243 44 6 0.865734 38 3 0.7899814 136 6 0.816691 192 6 0.852254 216 6 0.764246 139 6 0.789391 231 6 0.843856 189 6 0.8367322 0.6936313 0.838622 0.839134 0.9184492 0.757888 0.748254 0.7124497 0.7184501 0.7044118 0.8563407 0.7123162 0.8206607 NA 0.7733053 0.7969188 0.838502 0.8391266 0.8222157 0.810288 0.860662 0.9215686 0.778862 0.778806 0.9142157 0.7339122 0.701386 0.820343 0.8161765 0.8553148 0.8270945 0.789946 0.7088088 0.6388787 0.7255266 0.77065826 0.828155 0.80826416 0.8778157 0.8891927 0.8073970 0.821029 0.866085 3 0.774759 0.800194 -0.02232594 6 0.768239 0.793090 -0.02485143 0.9520722 1.3764e-01 insignificant 1.00000 1.000000 insignificant 0.9796992 0.02283545 weaklyHypometh 1 1.00000 insignificant -0.0400694 0.2380470 lowCoverage 1 lowCoverage 0.774759 0.746154 2.8071e-02 6 0.768239 0.7482080 0.0200310 5.1913e-02 8.0908e-01 insignificant 3.5557e-01 1.0000e+00 insignificant 5.8163e-02 7.0116e-01 insignificant 5.1931e-01 1.0000e+00 insignificant -0.0017017 9.6034e-01 insignificant 1.0000e+00 insignificant 0.774759 0.814891 -0.0550335 6 0.768239 0.817040 -0.04880126 9.8915e-01 1.0426e-02 weaklyHypometh 1.0000e+00 6.8044e-01 insignificant 9.8112e-01 2.8302e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.04712745 5.0082e-02 insignificant 9.0231e-01 insignificant 0.800194 0.746154 0.05282519 6 0.793090 0.7482080 0.0448824 1.9233e-02 9.8414e-01 weaklyHypermeth 1.4461e-01 1.0000e+00 insignificant 1.0520e-02 9.9792e-01 weaklyHypermeth 1.2524e-01 1.0000e+00 insignificant 0.03836768 3.8257e-01 lowCoverage 1.0000e+00 lowCoverage 0.800194 0.814891 -0.03453158 6 0.793090 0.817040 -0.0239498 8.9295e-01 6.4178e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 3.9248e-01 2.5117e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00705802 8.3886e-01 lowCoverage 1.000000 lowCoverage 0.746154 0.814891 -0.0857680 6 0.7482080 0.817040 -0.06883227 9.2857e-01 1.6063e-04 weaklyHypometh 1.0000e+00 2.9747e-03 weaklyHypometh 7.9419e-01 1.4170e-02 weaklyHypometh 1.0000e+00 2.0242e-01 insignificant -0.0454257 2.2610e-01 insignificant 1.0000e+00 insignificant chr17 73808050 73809050 51339 ENSG00000204277 0.76840 286 7 0.760276 216 5 0.767333 273 7 0.907978 264 7 0.879058 95 5 0.625441 463 7 0.5408428 177 7 0.726081 246 7 0.723947 210 7 0.685107 244 6 0.659631 321 7 0.6063987 171 5 0.800921 249 5 0.675676 125 4 0.783355 275 5 0.7919777 151 5 0.638671 120 5 0.757429 387 7 0.838647 540 8 0.910160 223 5 0.849828 87 6 0.879524 132 7 0.663433 180 7 0.608332 129 7 0.799084 104 7 0.867074 336 8 0.619345 254 7 0.545325 116 8 0.892249 318 7 0.757697 341 8 0.799513 418 7 0.799411 295 7 0.7585615 189 7 0.6601367 168 7 0.72916667 140 4 0.4991825 125 6 0.647540 173 8 0.4420797 418 8 0.634800 306 6 0.770569 263 7 0.863172 260 7 0.758409 153 5 0.834590 305 7 0.8967059 0.8022357 0.768614 0.957531 0.8896784 0.897481 0.880937 0.8969490 0.8613232 0.8695542 0.8556635 0.8419110 0.9061347 0.875743 0.8776914 0.9235204 0.876455 0.8330180 0.9062586 0.903387 0.946880 0.8915560 0.907249 0.858097 0.8109471 0.8789087 0.726288 0.873209 0.9235687 0.8731709 0.8822603 0.898949 0.8197564 0.7284126 0.6333951 0.60635346 0.869318 0.63848518 0.8826003 0.9001254 0.8919908 0.918789 0.895202 5 0.866905 0.849574 -0.00152274 6 0.598887 0.585555 0.01333274 0.6024361 5.3425e-01 insignificant 1.00000 1.000000 insignificant 0.8474776 0.34981992 insignificant 1 1.00000 insignificant -0.0143679 0.7288544 insignificant 1 insignificant 0.867223 0.530091 2.5987e-01 7 0.671311 0.4937057 0.1776056 1.7946e-07 9.1338e-01 hypermethylated 2.6786e-06 1.0000e+00 hypermethylated 2.3915e-03 7.3191e-01 weaklyHypermeth 3.4659e-02 1.0000e+00 weaklyHypermeth 0.1195888 7.0901e-02 insignificant 7.0901e-01 insignificant 0.867913 0.898213 -0.0140709 7 0.788442 0.768935 0.01950763 2.0276e-01 3.6756e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.4527e-01 4.4980e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02994156 5.3161e-01 insignificant 1.0000e+00 insignificant 0.852514 0.530528 0.28688096 7 0.721443 0.5430763 0.1783670 1.1854e-07 8.9661e-01 hypermethylated 2.1552e-06 1.0000e+00 hypermethylated 2.5137e-04 6.6474e-01 hypermethylated 4.4888e-03 1.0000e+00 hypermethylated 0.13395667 5.6832e-02 insignificant 5.9902e-01 insignificant 0.853522 0.898213 -0.02441847 6 0.754777 0.768935 -0.0141582 1.3104e-01 1.6074e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.0822e-01 4.6503e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01557369 7.7162e-01 insignificant 1.000000 insignificant 0.531844 0.898054 -0.2593966 7 0.6034181 0.743261 -0.13984283 3.7609e-01 8.4959e-04 hypomethylated 1.0000e+00 1.2567e-02 hypomethylated 5.4820e-01 2.1179e-02 weaklyHypometh 1.0000e+00 2.7153e-01 insignificant -0.1495304 4.7440e-02 weaklyHypometh 5.7157e-01 insignificant chr17 73823350 73824350 51340 ENSG00000204277 0.32324 544 12 0.231576 401 12 0.244119 492 12 0.326110 587 12 0.227913 307 12 0.577591 904 13 0.2552826 386 12 0.316332 367 12 0.267508 530 12 0.261200 411 12 0.329438 427 13 0.2807585 355 12 0.153904 544 12 0.289460 114 5 0.281381 467 12 0.3947492 316 12 0.260204 586 12 0.236617 697 12 0.090242 433 12 0.329570 520 12 0.165869 185 12 0.311084 394 12 0.455215 514 12 0.165436 281 12 0.337944 296 12 0.287782 619 12 0.166445 362 12 0.214893 188 12 0.327565 278 12 0.252395 593 12 0.215497 847 12 0.193680 770 12 0.5436099 363 12 0.5704217 269 12 0.59850536 362 12 0.3720131 251 12 0.614454 254 12 0.1361693 559 12 0.477110 535 12 0.508403 562 12 0.325916 528 12 0.409593 561 12 0.418113 613 12 0.2900345 0.1699620 0.234823 0.254909 0.2265920 0.544006 0.263124 0.2425355 0.2576161 0.2659019 0.2887271 0.2677965 0.0810941 0.285738 0.2513743 0.3638497 0.239975 0.2008948 0.0817228 0.271346 0.198519 0.2160818 0.380146 0.190955 0.3081615 0.2471625 0.176365 0.191161 0.2707393 0.2308172 0.1516323 0.170974 0.5348544 0.4658355 0.6090103 0.26417936 0.699428 0.09756067 0.4131028 0.4411843 0.2811074 0.361947 0.407888 12 0.262569 0.223015 0.04094476 12 0.319923 0.242126 0.07779700 0.0096561 1.0000e+00 weaklyHypermeth 1.00000 1.000000 insignificant 0.2449742 0.99850077 insignificant 1 1.00000 insignificant 0.0260429 0.4430906 insignificant 1 insignificant 0.262569 0.392614 -1.2833e-01 12 0.319923 0.3896656 -0.0697428 9.9915e-01 4.7505e-10 weaklyHypometh 1.0000e+00 9.5010e-08 weaklyHypometh 9.9928e-01 3.6936e-05 weaklyHypometh 1.0000e+00 9.2340e-03 weaklyHypometh -0.1886691 5.5689e-02 insignificant 6.1197e-01 insignificant 0.261534 0.367274 -0.1121564 12 0.313198 0.399861 -0.08666353 1.0000e+00 3.7237e-10 weaklyHypometh 1.0000e+00 3.7237e-07 weaklyHypometh 1.0000e+00 2.0720e-11 weaklyHypometh 1.0000e+00 2.0720e-08 weaklyHypometh -0.14396715 5.0920e-03 weaklyHypometh 2.7998e-01 insignificant 0.223015 0.392614 -0.17087650 12 0.242126 0.3896656 -0.1475398 9.9995e-01 1.0723e-10 weaklyHypometh 1.0000e+00 2.6808e-08 weaklyHypometh 9.9952e-01 1.4732e-04 weaklyHypometh 1.0000e+00 3.6831e-02 weaklyHypometh -0.21471195 3.5953e-02 weaklyHypometh 4.4670e-01 insignificant 0.222536 0.367274 -0.15314412 12 0.236641 0.399861 -0.1632203 1.0000e+00 2.3583e-18 weaklyHypometh 1.0000e+00 2.3583e-15 weaklyHypometh 1.0000e+00 9.9683e-13 weaklyHypometh 1.0000e+00 9.9683e-10 weaklyHypometh -0.17001001 2.0412e-03 weaklyHypometh 0.372730 insignificant 0.392701 0.367274 0.0199040 12 0.4111526 0.399861 0.01129141 2.4876e-01 7.5809e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.5169e-01 9.7819e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0447019 6.0510e-01 insignificant 1.0000e+00 insignificant chr17 73832150 73833150 51341 ENSG00000204277 0.30907 188 7 0.247766 242 7 0.503306 211 7 0.401779 201 7 0.302301 92 7 0.617932 310 7 0.2902684 162 7 0.366046 143 7 0.278954 183 6 0.543423 128 6 0.444922 235 8 0.4772386 92 6 0.075517 178 6 0.457627 59 1 0.227832 135 6 0.6811594 76 3 0.339883 152 6 0.316171 186 4 0.341872 177 7 0.211493 196 7 0.552226 60 4 0.050617 125 6 0.540076 157 7 0.266521 76 7 0.367593 120 4 0.257897 205 7 0.315495 131 7 0.357639 51 2 0.243602 102 4 0.304411 215 7 0.261151 274 7 0.545735 207 7 0.0039683 210 7 0.0270492 168 7 0.00000000 106 5 0.0034722 141 7 0.027158 124 7 0.0069444 196 7 0.207645 198 7 0.183316 219 7 0.304753 162 4 0.183861 178 6 0.136073 234 5 0.3676687 0.2089909 0.448903 0.379379 0.2880218 0.608031 0.317152 0.4312236 0.3102363 0.4555114 0.4450268 0.4945600 0.1347316 NA 0.3078442 0.7051346 0.443977 0.2370999 0.3424594 0.263916 0.459281 0.0776201 0.521884 0.353673 0.3513996 0.2181628 0.395020 0.273652 0.2922596 0.1919976 0.3179257 0.536358 0.0098093 0.0252160 0.0057875 0.00045838 0.014724 0.00275028 0.2334120 0.1990260 0.1919990 0.260784 0.136061 3 0.377466 0.333140 0.04016113 7 0.381168 0.356735 0.02443251 0.2135847 9.7111e-01 insignificant 1.00000 1.000000 insignificant 0.1150280 0.97260407 insignificant 1 1.00000 insignificant 0.0331476 0.5442765 insignificant 1 insignificant 0.377466 0.010582 3.5391e-01 7 0.381168 0.0097896 0.3713783 1.8475e-25 1.0000e+00 hypermethylated 7.1058e-24 1.0000e+00 hypermethylated 1.6760e-16 1.0000e+00 hypermethylated 1.3967e-14 1.0000e+00 hypermethylated 0.3602958 7.9867e-10 hypermethylated 9.9833e-08 hypermethylated 0.377466 0.196771 0.1676220 7 0.381168 0.283932 0.09723584 1.2100e-06 9.9398e-01 weaklyHypermeth 4.6537e-05 1.0000e+00 weaklyHypermeth 9.8732e-06 9.9924e-01 weaklyHypermeth 6.5821e-04 1.0000e+00 weaklyHypermeth 0.16859814 1.2077e-03 weaklyHypermeth 1.0065e-01 insignificant 0.333140 0.010582 0.31929411 7 0.356735 0.0097896 0.3469458 5.0139e-16 1.0000e+00 hypermethylated 1.5669e-14 1.0000e+00 hypermethylated 3.9307e-12 1.0000e+00 hypermethylated 2.3122e-10 1.0000e+00 hypermethylated 0.32714826 9.1229e-06 hypermethylated 6.5164e-04 hypermethylated 0.333140 0.196771 0.12740554 7 0.356735 0.283932 0.0728033 2.5606e-03 9.9552e-01 weaklyHypermeth 5.6902e-02 1.0000e+00 weaklyHypermeth 1.7198e-02 9.8406e-01 weaklyHypermeth 4.1945e-01 1.0000e+00 insignificant 0.13545057 1.8233e-02 weaklyHypermeth 0.631573 insignificant 0.010582 0.196771 -0.1914370 7 0.0097896 0.283932 -0.27414246 1.0000e+00 1.5410e-09 weaklyHypometh 1.0000e+00 5.1368e-08 weaklyHypometh 1.0000e+00 7.9642e-08 weaklyHypometh 1.0000e+00 4.9776e-06 weaklyHypometh -0.1916977 1.9912e-03 weaklyHypometh 6.8662e-02 weaklyHypometh chr17 73928950 73929950 51349 PGS1 ENSG00000087157 0.91853 125 10 0.535047 120 11 0.735736 102 9 0.535931 122 11 0.433760 115 12 0.603968 106 12 0.6220341 133 10 0.559248 59 6 0.625156 42 4 0.617659 60 5 0.628044 192 12 0.4277088 109 9 0.407242 85 4 0.000000 29 3 0.574193 114 9 0.2771825 71 8 0.426197 94 8 0.653846 35 0 0.784069 149 9 0.794444 44 5 0.333333 39 1 0.443723 39 1 0.401309 118 9 0.343407 62 9 0.062500 73 6 0.845625 92 7 0.341071 40 2 0.235897 37 2 0.456289 54 4 0.703131 110 9 0.729517 168 12 0.825546 118 11 0.7560313 118 11 0.5532072 173 12 0.97500000 108 5 0.2679787 168 7 0.532051 101 8 0.7886447 96 12 0.621647 79 9 0.747741 207 12 0.701818 42 4 0.690741 30 3 0.775640 123 12 0.9361263 0.5275248 0.791504 0.410979 0.4121571 0.526965 0.638584 0.4635481 0.6520009 0.6578313 0.6544041 0.5550055 0.5305508 NA 0.6168151 0.3009180 0.473071 0.6204819 0.7997731 0.698795 0.267068 0.2728055 0.420398 0.197074 0.1293204 0.8574297 0.182272 0.092369 0.6042004 0.8117801 0.6831258 0.757365 0.7245345 0.4997181 0.8725425 0.09871105 0.381727 0.86737426 0.6409098 0.8127424 0.6474694 0.755972 0.779834 0 0.604517 0.563886 0.04116395 8 0.617112 0.571013 0.04609946 0.0502450 6.1903e-01 insignificant 1.00000 1.000000 insignificant 0.0378479 0.96623064 weaklyHypermeth 1 1.00000 insignificant 0.0812209 0.3451719 insignificant 1 insignificant 0.604002 0.589005 -2.4634e-02 12 0.583847 0.5781710 0.0056762 1.0959e-02 3.4390e-02 weaklyHypometh 8.4952e-02 1.0000e+00 weaklyHypometh 7.4595e-01 2.1599e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0874856 4.5357e-01 insignificant 1.0000e+00 insignificant 0.604002 0.792100 -0.1526712 12 0.583847 0.709175 -0.12532756 8.5795e-01 8.7406e-05 weaklyHypometh 1.0000e+00 1.7481e-02 weaklyHypometh 8.5656e-01 1.0249e-02 weaklyHypometh 1.0000e+00 8.2002e-01 insignificant -0.14951750 8.7661e-03 weaklyHypometh 3.2053e-01 insignificant 0.563231 0.589005 -0.03262159 8 0.556297 0.5781710 -0.0218745 7.6873e-01 2.3044e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9957e-01 4.7769e-03 weaklyHypometh 1.0000e+00 5.9711e-01 insignificant -0.16870651 2.0125e-01 insignificant 1.0000e+00 insignificant 0.563231 0.792100 -0.18776670 8 0.556297 0.709175 -0.1528782 7.2248e-01 1.1964e-05 weaklyHypometh 1.0000e+00 4.3064e-03 weaklyHypometh 9.7518e-01 2.3809e-04 weaklyHypometh 1.0000e+00 7.9365e-02 weaklyHypometh -0.23073837 9.0424e-03 weaklyHypometh 0.484656 insignificant 0.589005 0.792100 -0.1841205 12 0.5781710 0.709175 -0.13100372 3.3111e-01 7.0839e-04 weaklyHypometh 1.0000e+00 1.1069e-02 weaklyHypometh 4.9792e-01 4.3812e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0620319 5.7480e-01 insignificant 1.0000e+00 insignificant chr17 74105450 74106450 51353 DNAH17 ENSG00000187775 0.85686 247 6 0.707449 83 6 0.711806 79 6 0.884132 107 6 0.888645 62 6 0.876599 186 6 0.7245255 65 6 0.593567 41 2 0.833219 79 6 0.892810 50 5 0.802986 158 6 0.6841270 48 6 0.823718 58 5 NA 0 0 0.796034 83 6 0.8171958 53 6 0.911111 50 5 0.776764 106 6 0.852002 76 6 0.854489 135 6 0.772222 27 3 0.916847 49 6 0.818780 97 6 0.814286 22 2 0.911376 44 6 0.838690 71 5 0.737500 31 2 0.900000 18 2 0.783333 59 6 0.695422 97 6 0.713504 79 6 0.766545 198 6 0.8015152 55 2 0.7056489 89 6 0.69838057 84 6 0.8051116 76 6 0.630556 24 2 0.8216764 96 6 0.904614 172 6 0.861587 208 6 0.864815 135 6 0.778333 209 6 0.911543 223 6 0.8602066 0.7375429 0.756879 0.884836 0.8971076 0.846169 0.778490 0.6956306 0.8630520 0.8864965 0.8643913 0.7733154 0.8430092 NA 0.7975954 0.8396975 0.924528 0.8016424 0.8450747 0.864052 0.742138 0.8859450 0.799647 0.785556 0.8834232 0.8668801 0.804860 0.847170 0.8764151 0.7270072 0.7223101 0.768863 0.7875643 0.7109085 0.7098284 0.75437299 0.640566 0.83061750 0.8999946 0.8647954 0.8972746 0.786038 0.917127 2 0.824462 0.803030 0.02646720 6 0.817142 0.799943 0.01719918 0.0747286 6.5020e-01 insignificant 1.00000 1.000000 insignificant 0.4293644 0.32372033 insignificant 1 1.00000 insignificant -0.0010752 0.9709337 lowCoverage 1 lowCoverage 0.824462 0.759434 6.9556e-02 6 0.817142 0.7604305 0.0567113 2.3294e-03 9.9248e-01 weaklyHypermeth 2.1370e-02 1.0000e+00 weaklyHypermeth 6.4547e-03 9.9371e-01 weaklyHypermeth 8.1705e-02 1.0000e+00 weaklyHypermeth 0.0608188 1.3331e-01 lowCoverage 1.0000e+00 lowCoverage 0.824462 0.864836 -0.0438292 6 0.817142 0.863629 -0.04648756 9.9478e-01 7.1059e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8634e-01 7.9408e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.05954497 8.0867e-02 insignificant 1.0000e+00 insignificant 0.803030 0.759434 0.04387315 6 0.799943 0.7604305 0.0395121 7.5595e-02 9.7349e-01 insignificant 4.9734e-01 1.0000e+00 insignificant 4.5209e-02 9.9699e-01 weaklyHypermeth 4.0008e-01 1.0000e+00 insignificant 0.06189404 1.3597e-01 lowCoverage 1.0000e+00 lowCoverage 0.803030 0.864836 -0.06521902 6 0.799943 0.863629 -0.0636867 9.9648e-01 3.3797e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.2400e-01 2.2325e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.05846977 9.6936e-02 lowCoverage 1.000000 lowCoverage 0.759434 0.864836 -0.1091282 6 0.7604305 0.863629 -0.10319886 9.9998e-01 1.0419e-03 weaklyHypometh 1.0000e+00 1.4674e-02 weaklyHypometh 9.9998e-01 2.4486e-03 weaklyHypometh 1.0000e+00 5.5649e-02 weaklyHypometh -0.1203638 1.3957e-02 lowCoverage 2.7468e-01 lowCoverage chr17 74107450 74108450 51354 DNAH17 ENSG00000187775 0.81722 283 7 0.834921 262 6 0.820591 159 6 0.853935 235 8 0.916306 99 6 0.856261 456 9 0.8675975 105 6 0.887915 182 6 0.855415 85 5 0.931984 90 5 0.918381 313 6 0.8968254 32 3 0.891592 165 6 0.875000 36 3 0.881962 134 6 0.7222222 13 0 0.713046 50 4 0.642412 211 6 0.944245 215 5 0.898946 288 9 0.890306 59 5 0.956477 107 4 0.780304 179 9 0.922812 120 6 0.796578 50 4 0.923505 338 6 0.875673 103 6 0.859962 50 5 0.920752 164 4 0.927308 291 6 0.930855 479 6 0.834173 334 9 0.4651362 207 6 0.2730089 128 6 0.34591195 186 3 0.6250000 24 4 0.229406 157 6 0.4937243 290 6 0.811193 216 7 0.782277 321 9 0.791695 237 7 0.790297 211 7 0.757055 221 9 0.8879923 0.8425922 0.808865 0.915951 0.9446921 0.895464 0.875422 0.8891803 0.9016326 0.9460077 0.9189291 0.9225302 0.9264676 0.931722 0.8355462 0.6716418 0.865527 0.6621468 0.9123795 0.916083 0.970949 0.9227807 0.893827 0.925328 0.8281860 0.9315586 0.894037 0.826493 0.9029046 0.9307349 0.9269351 0.907846 0.2530548 0.0726240 0.1900496 0.57759879 0.122911 0.46073644 0.8505694 0.8619882 0.8550971 0.858828 0.830905 2 0.866315 0.906332 -0.03240598 6 0.838043 0.808582 0.02946163 0.7408392 5.4804e-02 insignificant 1.00000 1.000000 insignificant 0.7508895 0.25123335 insignificant 1 1.00000 insignificant -0.0335533 0.1704432 insignificant 1 insignificant 0.878118 0.321573 5.6593e-01 6 0.893618 0.3317196 0.5618984 1.2570e-36 1.0000e+00 hypermethylated 8.9783e-35 1.0000e+00 hypermethylated 1.9368e-10 1.0000e+00 hypermethylated 9.6839e-09 1.0000e+00 hypermethylated 0.4459742 4.6728e-04 hypermethylated 1.6113e-02 hypermethylated 0.866276 0.825041 0.0253151 5 0.820048 0.788152 0.03189600 1.4914e-01 9.6393e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.1525e-03 9.8159e-01 weaklyHypermeth 2.2348e-01 1.0000e+00 insignificant 0.06483519 2.9206e-03 weaklyHypermeth 1.7180e-01 insignificant 0.915608 0.321573 0.58661914 6 0.892679 0.3317196 0.5609598 5.3701e-33 1.0000e+00 hypermethylated 4.7839e-31 1.0000e+00 hypermethylated 1.4047e-11 1.0000e+00 hypermethylated 7.3933e-10 1.0000e+00 hypermethylated 0.47952745 3.3749e-04 hypermethylated 1.2500e-02 hypermethylated 0.906608 0.825041 0.05827973 4 0.815091 0.788152 0.0269386 1.0745e-04 8.9988e-01 lowCoverage 3.3577e-03 1.0000e+00 lowCoverage 4.8489e-03 9.4616e-01 lowCoverage 1.3854e-01 1.0000e+00 lowCoverage 0.09838848 9.1414e-05 weaklyHypermeth 0.045707 weaklyHypermeth 0.321897 0.854470 -0.5885891 4 0.3870062 0.848005 -0.46099925 1.0000e+00 1.3199e-12 lowCoverage 1.0000e+00 7.7560e-11 lowCoverage 1.0000e+00 1.1218e-06 lowCoverage 1.0000e+00 5.9043e-05 lowCoverage -0.3811390 1.3933e-03 weaklyHypometh 6.2091e-02 weaklyHypometh chr17 74214750 74215750 51357 ENSG00000209235 0.75049 110 6 0.703091 133 7 0.686508 53 7 0.809833 86 7 0.649093 58 7 0.822733 210 6 0.7010204 67 7 0.781061 65 7 0.702381 25 1 0.722109 37 6 0.756560 291 7 0.5785714 17 1 0.660714 55 7 0.547619 60 5 0.642857 28 1 0.7500000 20 0 0.750000 8 1 0.702652 115 7 0.830303 63 6 0.811872 111 7 0.623810 46 4 0.785714 21 0 0.812671 84 7 0.754426 62 6 0.779478 93 7 0.752475 106 7 0.805139 103 4 0.552083 24 0 0.788095 66 6 0.804006 112 7 0.722944 81 6 0.808104 86 6 0.8595752 78 7 0.6253968 66 7 0.69511555 100 7 0.8333333 12 0 0.626112 66 7 0.7771340 74 7 0.807153 125 7 0.768707 84 6 0.774552 124 7 0.690476 47 7 0.803054 88 7 0.7374532 0.6984040 0.676027 0.800387 0.6490252 0.785395 0.700699 0.7675148 0.6893116 0.7051242 0.7474447 0.5733696 0.6562500 0.544082 0.6358696 0.7146739 NA 0.6950244 0.8304348 0.799660 0.619565 0.7554348 0.779985 0.754750 0.7664337 0.6411738 0.790544 0.611413 0.7798913 0.7987667 0.7130435 0.767714 0.7826709 0.6135266 0.6468898 0.81156832 0.617793 0.69812362 0.7990138 0.7589286 0.7785006 0.668478 0.784886 0 0.736973 0.744898 -0.01159927 6 0.775270 0.758121 0.01714982 0.8774088 2.7910e-01 insignificant 1.00000 1.000000 insignificant 0.9807883 0.21225888 insignificant 1 1.00000 insignificant -0.0311055 0.2972672 insignificant 1 insignificant 0.736973 0.680307 6.1798e-02 7 0.775270 0.7239515 0.0513189 1.2109e-02 9.9342e-01 weaklyHypermeth 9.2433e-02 1.0000e+00 weaklyHypermeth 2.2552e-01 8.0538e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0181378 7.0072e-01 insignificant 1.0000e+00 insignificant 0.736809 0.756410 -0.0314290 7 0.743166 0.777661 -0.03449511 9.6097e-01 8.4454e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8981e-01 9.4610e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.05081505 9.0411e-02 insignificant 1.0000e+00 insignificant 0.745475 0.684343 0.07160517 6 0.806496 0.7791612 0.0273352 2.7432e-03 9.9561e-01 weaklyHypermeth 2.4714e-02 1.0000e+00 weaklyHypermeth 4.7208e-02 9.9669e-01 weaklyHypermeth 4.1410e-01 1.0000e+00 insignificant 0.01296771 7.9339e-01 insignificant 1.0000e+00 insignificant 0.744875 0.756410 -0.01832175 6 0.759281 0.777661 -0.0183806 8.7674e-01 3.3720e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.7744e-01 4.7004e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01970955 5.4223e-01 insignificant 1.000000 insignificant 0.679487 0.756410 -0.0953227 7 0.6845160 0.777661 -0.09314524 9.9407e-01 2.5739e-04 weaklyHypometh 1.0000e+00 4.5157e-03 weaklyHypometh 9.8313e-01 7.2599e-03 weaklyHypometh 1.0000e+00 1.2118e-01 insignificant -0.0326773 5.0654e-01 insignificant 1.0000e+00 insignificant chr17 74224550 74225550 51359 ENSG00000209235 0.39862 133 6 0.503388 234 9 0.536514 233 9 0.264711 96 5 0.489011 216 9 0.590173 156 7 0.6683566 243 9 0.609536 172 9 0.636761 160 9 0.469870 183 8 0.607146 310 9 0.7291851 181 8 0.071699 310 9 0.750000 4 0 0.476817 218 9 0.7070203 193 7 0.442716 272 8 0.376543 43 3 0.483720 336 9 0.372090 174 8 0.586640 60 7 0.050000 30 3 0.637038 129 9 0.475723 107 8 0.656250 18 1 0.472750 248 9 0.274002 80 6 0.484480 66 6 0.280651 178 9 0.296403 314 11 0.285693 438 11 0.835832 148 8 0.0285842 251 9 0.0000000 213 9 0.04181460 247 11 0.0000000 106 6 0.068329 137 9 0.0276932 271 10 0.024355 165 9 0.348180 114 5 0.146293 95 4 0.119094 63 3 0.163016 91 4 0.3667952 0.3912559 0.495536 0.145492 0.4931458 0.556434 0.604084 0.5310681 0.5091209 0.3843601 0.5671224 0.6699927 0.0304918 NA 0.3396320 0.7021782 0.427470 0.2506313 0.3088328 0.219679 0.460949 0.1341995 0.468052 0.449275 0.4278285 0.3753850 0.243933 0.503680 0.2069186 0.2660620 0.1587275 0.687899 0.0537983 0.0000000 0.0482517 0.00125531 0.101512 0.02276946 0.0421273 0.2682842 0.0757279 0.195815 0.133746 3 0.481510 0.378304 0.09261716 9 0.507374 0.443383 0.06399153 0.0045351 1.0000e+00 weaklyHypermeth 0.81691 1.000000 insignificant 0.3933862 0.99704522 insignificant 1 1.00000 insignificant 0.0645724 0.3860256 insignificant 1 insignificant 0.481625 0.027778 4.4110e-01 9 0.550270 0.0498544 0.5004158 1.2147e-32 1.0000e+00 hypermethylated 5.2814e-31 1.0000e+00 hypermethylated 4.5704e-19 1.0000e+00 hypermethylated 5.0782e-17 1.0000e+00 hypermethylated 0.4814573 2.2356e-11 hypermethylated 3.1937e-09 hypermethylated 0.481222 0.119545 0.2989635 4 0.509386 0.134090 0.37529550 2.0087e-16 1.0000e+00 lowCoverage 2.2318e-14 1.0000e+00 lowCoverage 1.2010e-10 1.0000e+00 lowCoverage 1.7158e-08 1.0000e+00 lowCoverage 0.34900643 5.2086e-04 hypermethylated 5.4689e-02 hypermethylated 0.377275 0.027778 0.35034198 9 0.350613 0.0498544 0.3007590 7.6034e-17 1.0000e+00 hypermethylated 2.5345e-15 1.0000e+00 hypermethylated 1.2558e-15 1.0000e+00 hypermethylated 1.1417e-13 1.0000e+00 hypermethylated 0.41688497 3.1144e-05 hypermethylated 1.4921e-03 hypermethylated 0.377483 0.119545 0.23535129 4 0.382487 0.134090 0.2483972 3.7714e-07 1.0000e+00 lowCoverage 2.5143e-05 1.0000e+00 lowCoverage 2.5797e-07 1.0000e+00 lowCoverage 2.8663e-05 1.0000e+00 lowCoverage 0.28443407 3.9170e-03 weaklyHypermeth 0.372730 insignificant 0.027005 0.121212 -0.0869238 4 0.0220766 0.206249 -0.18417270 1.0000e+00 7.5916e-04 lowCoverage 1.0000e+00 1.1567e-02 lowCoverage 9.9999e-01 1.5526e-02 lowCoverage 1.0000e+00 2.1564e-01 lowCoverage -0.1324509 6.4911e-02 insignificant 6.8327e-01 insignificant chr17 74390950 74391950 51369 USP36 ENSG00000055483 0.47987 535 14 0.389468 518 14 0.441162 652 14 0.312296 475 12 0.491509 363 13 0.448370 1037 14 0.3889479 413 14 0.331735 594 14 0.395364 543 15 0.416440 615 14 0.462204 518 14 0.4153461 389 14 0.127221 597 14 0.484738 322 6 0.368162 718 14 0.3215597 305 13 0.309697 354 14 0.214536 541 14 0.403386 514 14 0.331330 532 15 0.603255 178 12 0.127052 352 11 0.578794 431 14 0.373123 265 15 0.461682 212 11 0.236855 753 14 0.309689 400 15 0.220491 340 14 0.452182 354 14 0.209684 818 14 0.260339 1040 14 0.700882 583 15 0.0134191 573 14 0.0013072 297 14 0.00073964 618 11 0.0024631 164 11 0.039251 436 14 0.0771294 605 14 0.171071 543 14 0.143279 555 14 0.176829 411 14 0.131387 518 14 0.195229 484 12 0.3899186 0.3612558 0.430141 0.321922 0.3846063 0.438361 0.359951 0.3152551 0.3421844 0.3791044 0.5117587 0.4280436 0.1165378 0.407640 0.2901166 0.3252743 0.219163 0.1921592 0.3051560 0.233959 0.604983 0.0908402 0.487749 0.341902 0.3313144 0.2526077 0.299404 0.260734 0.4562988 0.1893380 0.2573321 0.665727 0.0086601 0.0046052 0.0028329 0.00129580 0.016214 0.01016748 0.0818439 0.1451086 0.0789117 0.085801 0.113588 11 0.367531 0.345448 0.01804490 14 0.373364 0.363980 0.00938450 0.3117501 7.5279e-01 insignificant 1.00000 1.000000 insignificant 0.6878404 0.72702575 insignificant 1 1.00000 insignificant -0.0011683 0.9837257 insignificant 1 insignificant 0.367531 0.011887 3.4912e-01 14 0.373364 0.0280710 0.3452930 2.3157e-59 1.0000e+00 hypermethylated 3.8595e-57 1.0000e+00 hypermethylated 1.1441e-31 1.0000e+00 hypermethylated 5.7204e-29 1.0000e+00 hypermethylated 0.3542825 2.3830e-13 hypermethylated 5.9575e-11 hypermethylated 0.367496 0.139785 0.2402548 14 0.351401 0.202463 0.14893863 1.3102e-26 1.0000e+00 hypermethylated 6.5512e-24 1.0000e+00 hypermethylated 8.2555e-21 1.0000e+00 hypermethylated 8.2555e-18 1.0000e+00 hypermethylated 0.21310858 6.6660e-09 hypermethylated 6.6660e-06 hypermethylated 0.345328 0.011883 0.32734854 14 0.342569 0.0264198 0.3161492 1.6272e-32 1.0000e+00 hypermethylated 1.1623e-30 1.0000e+00 hypermethylated 2.9701e-25 1.0000e+00 hypermethylated 1.4850e-22 1.0000e+00 hypermethylated 0.35545080 2.3466e-05 hypermethylated 1.2351e-03 hypermethylated 0.345448 0.139841 0.22927491 14 0.363980 0.215117 0.1488628 7.3096e-14 1.0000e+00 hypermethylated 1.2183e-11 1.0000e+00 hypermethylated 1.1625e-15 1.0000e+00 hypermethylated 5.8125e-13 1.0000e+00 hypermethylated 0.21427687 1.7772e-03 weaklyHypermeth 0.372730 insignificant 0.011887 0.139841 -0.1043382 14 0.0280710 0.215117 -0.18704575 1.0000e+00 7.6099e-20 weaklyHypometh 1.0000e+00 9.5124e-18 weaklyHypometh 1.0000e+00 2.5011e-10 weaklyHypometh 1.0000e+00 2.2737e-08 weaklyHypometh -0.1411739 1.6729e-05 weaklyHypometh 2.7882e-03 weaklyHypometh chr17 74441250 74442250 51371 TIMP2 ENSG00000035862 0.82588 201 6 0.514236 331 9 0.603769 307 9 0.647188 260 8 0.669091 261 9 0.788988 477 8 0.7636146 257 9 0.648201 296 9 0.637144 237 9 0.694046 181 9 0.737579 405 9 0.7378621 136 7 0.633600 217 7 0.656685 162 6 0.648181 278 8 0.8602333 127 5 0.647703 86 2 0.374517 235 6 0.798780 539 9 0.786488 197 6 0.901881 162 11 0.530084 111 8 0.706124 206 9 0.607573 134 6 0.740881 264 8 0.688335 418 9 0.645787 331 8 0.534663 143 7 0.616060 275 8 0.625094 400 9 0.628182 594 9 0.901159 286 8 0.1226631 404 9 0.0035842 221 9 0.12573964 300 5 0.0065789 119 5 0.209249 443 10 0.0328358 427 8 0.518287 217 8 0.604541 270 8 0.617094 219 8 0.678786 166 6 0.556734 229 8 0.7967630 0.5763219 0.689223 0.801979 0.7259931 0.855836 0.845852 0.7799838 0.7270451 0.7963954 0.8422597 0.8254384 0.6705273 0.776320 0.7080046 0.8744906 0.717104 0.4158192 0.8134758 0.750030 0.917264 0.5592186 0.774507 0.786474 0.7407356 0.7214116 0.611319 0.807213 0.7291971 0.7106265 0.6939560 0.857118 0.0086735 0.0046671 0.0015863 0.00761478 0.042707 0.08802795 0.7069654 0.6522210 0.6884751 0.641083 0.559396 6 0.732318 0.718844 0.01848844 9 0.639275 0.698583 -0.05930821 0.3761250 3.0093e-01 insignificant 1.00000 1.000000 insignificant 0.8641799 0.64575100 insignificant 1 1.00000 insignificant 0.0065375 0.8809478 insignificant 1 insignificant 0.732267 0.029258 7.0898e-01 8 0.603561 0.2045191 0.3990414 4.8761e-76 1.0000e+00 hypermethylated 9.7522e-74 1.0000e+00 hypermethylated 1.1158e-18 1.0000e+00 hypermethylated 1.1158e-16 1.0000e+00 hypermethylated 0.6002477 1.5230e-08 hypermethylated 1.3846e-06 hypermethylated 0.732547 0.671208 0.0868041 8 0.696739 0.461867 0.23487259 8.9821e-08 9.5585e-01 weaklyHypermeth 4.2772e-06 1.0000e+00 weaklyHypermeth 3.9026e-04 9.9089e-01 weaklyHypermeth 1.6261e-02 1.0000e+00 weaklyHypermeth 0.08860074 3.4658e-02 weaklyHypermeth 7.6834e-01 insignificant 0.718759 0.028751 0.69452745 8 0.675397 0.1433283 0.5320688 1.2256e-65 1.0000e+00 hypermethylated 3.0640e-63 1.0000e+00 hypermethylated 2.1729e-17 1.0000e+00 hypermethylated 2.1729e-15 1.0000e+00 hypermethylated 0.59371019 6.5647e-09 hypermethylated 1.4735e-06 hypermethylated 0.718382 0.671208 0.08387839 8 0.661833 0.461867 0.1999662 3.3983e-05 9.8806e-01 weaklyHypermeth 1.2586e-03 1.0000e+00 weaklyHypermeth 3.5713e-03 9.9351e-01 weaklyHypermeth 1.1160e-01 1.0000e+00 insignificant 0.08206323 8.6040e-02 insignificant 1.000000 insignificant 0.025223 0.671208 -0.6461001 8 0.0178728 0.461867 -0.44399392 1.0000e+00 6.9426e-35 hypomethylated 1.0000e+00 1.3885e-32 hypomethylated 1.0000e+00 7.4350e-11 hypomethylated 1.0000e+00 8.2611e-09 hypomethylated -0.5116470 9.6252e-07 hypomethylated 3.4724e-04 hypomethylated chr17 74447050 74448050 51372 TIMP2 ENSG00000035862 0.67381 194 8 0.513140 105 3 0.745339 115 5 0.756495 293 7 0.918464 78 5 0.475720 130 7 0.6236563 110 5 0.633333 62 4 0.833333 37 2 0.571429 19 2 0.641285 173 6 0.3651515 26 2 0.829932 41 3 0.554293 34 3 0.624074 31 3 0.5666667 26 5 1.000000 3 0 0.634548 155 8 0.815306 87 6 0.626190 55 5 0.687500 26 2 1.000000 2 0 0.641093 135 6 0.638889 33 3 0.566667 12 1 0.693538 127 7 0.238889 23 2 0.574074 27 2 0.674495 66 6 0.737532 105 6 0.744137 140 7 0.691947 138 7 0.6923113 114 6 0.8142857 70 5 0.75614035 92 6 NA 0 0 0.589999 142 6 0.5863628 133 7 0.699732 342 6 0.653756 344 8 0.718093 287 7 0.714674 102 6 0.679482 327 6 0.8805159 0.8034228 0.836754 0.932142 0.9256508 0.825665 0.842219 0.8215517 1.0000000 0.8558375 0.9276458 0.6762017 0.9072250 0.806688 0.8285441 0.8620690 0.918655 0.8598105 0.9661330 0.849425 0.850214 0.8671213 0.862835 0.899425 0.7528736 0.9290807 0.347701 0.802682 0.8581243 0.8878868 0.9407163 0.948284 0.8266124 0.7463054 0.9186933 NA 0.810684 0.76240790 0.9369724 0.8447235 0.9044157 0.951146 0.871256 1 0.798196 0.799760 0.00338720 6 0.602488 0.675649 -0.07316118 0.5476377 8.3558e-01 insignificant 1.00000 1.000000 insignificant 0.5478697 0.73898993 insignificant 1 1.00000 insignificant 0.0127113 0.8357683 lowCoverage 1 lowCoverage 0.799322 0.742287 4.7568e-02 6 0.622736 0.6263685 -0.0036321 5.0257e-02 9.9748e-01 insignificant 3.4660e-01 1.0000e+00 insignificant 2.2521e-01 9.8564e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0177117 7.6197e-01 lowCoverage 1.0000e+00 lowCoverage 0.798646 0.839515 -0.0119094 5 0.662736 0.729977 -0.06724094 7.5697e-01 3.9346e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.5339e-01 3.7497e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02303935 5.3594e-01 lowCoverage 1.0000e+00 lowCoverage 0.799520 0.742287 0.04141598 6 0.643214 0.6263685 0.0168452 2.3181e-01 8.0823e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.5020e-01 8.2660e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03042306 6.5766e-01 lowCoverage 1.0000e+00 lowCoverage 0.799520 0.839515 -0.01237828 5 0.643214 0.729977 -0.0867636 7.3408e-01 4.6427e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.3552e-01 5.7691e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03575068 4.9741e-01 lowCoverage 1.000000 lowCoverage 0.741818 0.839286 -0.0630254 5 0.5848539 0.699975 -0.11512091 9.9922e-01 2.1336e-02 weaklyHypometh 1.0000e+00 1.9050e-01 insignificant 9.9981e-01 1.0436e-01 insignificant 1.0000e+00 8.4845e-01 insignificant -0.0053276 9.1382e-01 insignificant 1.0000e+00 insignificant chr17 74468950 74469950 51375 TIMP2 ENSG00000035862 0.58597 176 6 0.565184 106 6 0.585217 112 6 0.568092 103 6 0.498529 51 6 0.695765 181 6 0.5911519 97 6 0.789174 58 4 0.507386 62 4 0.554762 72 6 0.628051 217 6 0.7416667 46 6 0.432870 90 6 0.613333 18 3 0.540261 63 6 0.6885522 53 6 0.562988 162 6 0.511130 105 6 0.666035 100 6 0.548839 179 4 0.645833 31 2 0.757919 49 4 0.550603 153 6 0.620833 25 2 0.747565 44 6 0.525097 125 6 0.723462 62 5 0.725000 35 1 0.527708 80 6 0.595089 96 5 0.502764 135 6 0.547385 231 6 0.5050866 89 7 0.5121184 50 4 0.60930944 116 6 0.6629464 53 4 0.618202 68 6 0.5991308 132 6 0.620928 132 6 0.577033 176 6 0.687671 148 6 0.600798 197 6 0.749546 166 6 0.7066573 0.6972510 0.739951 0.707763 0.6158158 0.765436 0.714352 0.8209966 0.7421384 0.6699611 0.7487535 0.7757862 0.6734218 0.763544 0.6672324 0.7498253 0.658471 0.6879144 0.7291786 0.790472 0.711740 0.8196329 0.683537 0.812981 0.8688230 0.6471356 0.830775 0.788260 0.6874214 0.7189578 0.6054071 0.715275 0.6636718 0.5579941 0.7249798 0.78425427 0.704307 0.73334096 0.7452867 0.7190293 0.7098452 0.717438 0.809786 2 0.703559 0.687617 0.02598562 6 0.567348 0.578577 -0.01122941 0.2291996 7.4610e-01 insignificant 1.00000 1.000000 insignificant 0.8228842 0.32821833 insignificant 1 1.00000 insignificant -0.0286902 0.4036691 lowCoverage 1 lowCoverage 0.703559 0.687008 1.7752e-02 6 0.567348 0.5709497 -0.0036020 4.0838e-01 8.2450e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.8134e-01 6.6612e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0092825 7.7815e-01 insignificant 1.0000e+00 insignificant 0.703559 0.692308 -0.0135639 6 0.567348 0.617662 -0.05031440 8.9145e-01 2.6736e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.0631e-01 2.7387e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.05344711 1.9021e-01 insignificant 1.0000e+00 insignificant 0.687617 0.687008 -0.00621742 6 0.578577 0.5709497 0.0076274 4.9600e-01 5.4842e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.3012e-01 9.0342e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03797278 3.2854e-01 lowCoverage 1.0000e+00 lowCoverage 0.687617 0.692308 -0.03902891 6 0.578577 0.617662 -0.0390850 8.4009e-01 7.1909e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 6.7235e-01 5.4951e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02475688 5.6666e-01 lowCoverage 1.000000 lowCoverage 0.687008 0.692308 -0.0325088 6 0.5709497 0.617662 -0.04671243 9.5840e-01 2.5464e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7345e-01 2.2822e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0627297 1.6025e-01 insignificant 1.0000e+00 insignificant chr17 74505050 74506050 51376 LGALS3BP ENSG00000108679 0.81148 340 9 0.601073 386 11 0.874121 248 12 0.933061 392 10 0.779903 163 9 0.668690 701 13 0.8614571 203 11 0.797375 249 10 0.870761 357 12 0.821668 361 10 0.909249 314 10 0.6459336 166 10 0.776035 400 11 0.878578 272 10 0.789413 410 10 0.8151449 145 8 0.519697 48 6 0.850316 426 11 0.773688 425 10 0.654734 322 12 0.677249 136 10 0.614985 170 10 0.705463 286 12 0.603318 231 11 0.847447 110 8 0.932569 333 10 0.599038 243 12 0.586018 199 12 0.797742 287 11 0.903114 322 11 0.900478 491 12 0.692355 353 13 0.6053569 232 12 0.7411891 144 10 0.60000000 159 4 0.6435897 31 3 0.547060 238 15 0.8608401 362 12 0.881116 314 11 0.825308 327 12 0.774209 331 11 0.733758 327 11 0.879195 332 10 0.9671142 0.8851275 0.925350 0.932158 0.9065042 0.940036 0.890526 0.9231891 0.8786819 0.9108667 0.9363695 0.9371908 0.9414667 0.927100 0.9368208 0.9220999 0.770316 0.8971370 0.8907543 0.907323 0.956363 0.9332990 0.895749 0.729011 0.9811524 0.9402873 0.840507 0.893223 0.8996358 0.9179707 0.9590571 0.937668 0.8426678 0.8252853 0.7397047 0.79975239 0.879980 0.88269124 0.9586394 0.9494371 0.9068775 0.930413 0.939472 6 0.903761 0.883898 -0.00007028 11 0.637476 0.596581 0.04089515 0.6254100 4.6598e-01 insignificant 1.00000 1.000000 insignificant 0.9802524 0.21579217 insignificant 1 1.00000 insignificant 0.0433045 0.3488361 insignificant 1 insignificant 0.903889 0.847341 3.1651e-02 11 0.644712 0.5875150 0.0571966 1.4211e-01 7.4900e-01 insignificant 8.6129e-01 1.0000e+00 insignificant 6.2809e-01 6.9263e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.1152799 6.1689e-02 insignificant 6.3597e-01 insignificant 0.904016 0.917842 -0.0121131 11 0.652751 0.643372 0.00937920 7.5327e-01 3.6744e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.4302e-01 1.8575e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.03709824 3.5022e-01 insignificant 1.0000e+00 insignificant 0.884737 0.847341 0.02941664 11 0.627980 0.5875150 0.0404649 3.8085e-01 9.5193e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.0535e-01 9.9378e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.07197539 2.5745e-01 insignificant 1.0000e+00 insignificant 0.885859 0.917842 -0.02049048 11 0.662868 0.643372 0.0194957 4.8669e-01 3.9143e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.4703e-01 4.0476e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.08040271 1.1370e-01 insignificant 1.000000 insignificant 0.848069 0.917842 -0.0518548 11 0.6201547 0.643372 -0.02321724 9.9374e-01 1.8583e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9881e-01 1.6463e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.1523781 2.4510e-02 weaklyHypometh 3.6566e-01 insignificant chr17 75390550 75391550 51383 CBX8 ENSG00000141570 0.03589 1023 30 0.051149 684 28 0.158373 981 30 0.027185 863 25 0.015853 472 25 0.066839 1661 32 0.0463921 620 25 0.051745 552 24 0.034412 879 22 0.057760 809 23 0.074179 621 24 0.0332793 627 25 0.025761 971 25 0.097091 272 9 0.038736 695 25 0.0069670 429 18 0.018746 487 25 0.025738 1044 25 0.032997 630 22 0.034130 958 27 0.081256 271 20 0.012676 699 22 0.060038 855 31 0.025133 472 22 0.074673 518 22 0.034759 979 29 0.033664 616 22 0.062430 296 17 0.062891 459 22 0.022258 1032 28 0.021687 1301 31 0.053740 1143 31 0.0252794 593 30 0.1294117 401 21 0.19666667 183 5 0.0600127 362 20 0.124790 238 18 0.1249387 752 27 0.007637 1164 25 0.022575 1031 27 0.046435 757 23 0.019391 1207 25 0.023430 1014 30 0.0334658 0.0516266 0.129136 0.037738 0.0198783 0.079892 0.051892 0.0581625 0.0369750 0.0585236 0.0937391 0.0395143 0.0282190 0.050250 0.0238064 0.0089537 0.021356 0.0365004 0.0407364 0.032855 0.126217 0.0122465 0.059696 0.048866 0.0799201 0.0351538 0.038175 0.079990 0.0721150 0.0195292 0.0297294 0.064273 0.0240319 0.1278219 0.2057891 0.05462678 0.121480 0.10499899 0.0121944 0.0328225 0.0414767 0.030291 0.032550 17 0.049941 0.042703 0.00446206 28 0.049190 0.035577 0.01361320 0.0476133 9.9994e-01 weaklyHypermeth 1.00000 1.000000 insignificant 0.5704357 0.96356471 insignificant 1 1.00000 insignificant 0.0012274 0.9039164 insignificant 1 insignificant 0.049957 0.081455 -3.3525e-02 26 0.050595 0.0888333 -0.0382381 2.9185e-01 6.4775e-06 weaklyHypometh 1.0000e+00 1.0796e-03 weaklyHypometh 8.9197e-01 5.5803e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0635221 4.8074e-02 weaklyHypometh 5.4630e-01 insignificant 0.049971 0.023777 0.0245602 25 0.052083 0.017337 0.03474673 1.1034e-08 1.0000e+00 weaklyHypermeth 6.1300e-07 1.0000e+00 weaklyHypermeth 4.3735e-04 1.0000e+00 weaklyHypermeth 1.6364e-02 1.0000e+00 weaklyHypermeth 0.02276754 3.3937e-02 weaklyHypermeth 7.6834e-01 insignificant 0.042728 0.081455 -0.03897028 26 0.036593 0.0888333 -0.0522402 9.6713e-01 4.2892e-05 weaklyHypometh 1.0000e+00 6.1275e-03 weaklyHypometh 9.6542e-01 6.1641e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.06474949 4.5122e-02 weaklyHypometh 5.1275e-01 insignificant 0.042758 0.023777 0.01990463 24 0.037669 0.017337 0.0203328 7.3412e-04 1.0000e+00 weaklyHypermeth 1.9319e-02 1.0000e+00 weaklyHypermeth 2.0891e-03 9.9999e-01 weaklyHypermeth 8.7046e-02 1.0000e+00 weaklyHypermeth 0.02154011 3.6248e-02 weaklyHypermeth 0.866799 insignificant 0.081220 0.023777 0.0585031 22 0.0855637 0.017337 0.06822708 5.3506e-03 1.0000e+00 weaklyHypermeth 3.8219e-01 1.0000e+00 insignificant 6.9231e-02 1.0000e+00 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0862896 1.5692e-02 weaklyHypermeth 2.9547e-01 insignificant chr17 75845650 75846650 51390 SLC26A11 ENSG00000181045 0.71528 17 2 0.628277 135 5 0.673345 63 5 0.445455 22 2 0.733333 57 5 0.787530 142 5 0.6775253 106 5 0.690688 90 5 0.416667 15 1 0.533333 11 2 0.802589 119 5 0.8535354 28 3 0.696332 68 5 0.625000 9 1 0.675529 78 5 0.3333333 4 0 0.760438 109 3 0.865385 69 3 0.753298 78 5 0.661861 82 5 0.675000 56 5 0.834539 49 3 0.833333 94 3 0.400000 14 2 0.813939 39 5 0.703701 92 4 0.685051 45 5 0.722222 22 3 0.742613 55 4 0.718167 105 5 0.696768 95 5 0.848128 96 5 0.6864171 77 5 0.5000000 12 2 0.53929924 55 4 0.6476190 45 3 0.711471 77 5 0.6358059 77 5 0.694444 15 2 0.768658 146 5 0.759197 84 5 0.875000 8 0 0.734409 58 5 0.7152778 0.6531100 0.534722 0.668182 0.6111111 0.687500 0.625000 0.6666667 0.6250000 0.8000000 0.9000000 NA 0.7803030 0.625000 0.6875000 0.5000000 NA 0.8750000 0.7000000 0.666667 0.750000 1.0000000 0.833333 0.800000 0.7166667 0.7556818 0.700000 NA 0.6620879 0.6784314 0.6978022 0.781250 0.6363636 0.5000000 0.6098485 0.50000000 0.437500 0.60714286 0.6944444 0.7272727 0.7075163 0.875000 0.750000 0 0.719662 0.754593 -0.02293701 5 0.713324 0.744639 -0.03131562 0.8015165 1.3179e-01 insignificant 1.00000 1.000000 insignificant 0.8116152 0.15775468 insignificant 1 1.00000 insignificant -0.0563519 0.2389077 lowCoverage 1 lowCoverage 0.719662 0.708455 1.3670e-02 5 0.713324 0.6748729 0.0384509 5.5636e-03 4.6318e-02 weaklyHypermeth 4.7552e-02 1.0000e+00 weaklyHypermeth 5.7174e-02 1.3706e-01 insignificant 5.1508e-01 1.0000e+00 insignificant 0.0463346 3.3367e-01 lowCoverage 1.0000e+00 lowCoverage 0.719662 0.800643 -0.0579125 5 0.713324 0.761279 -0.04795504 6.7515e-01 4.8951e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 7.0067e-01 1.4879e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.09990505 3.7533e-02 lowCoverage 7.8193e-01 lowCoverage 0.754593 0.708455 0.04171989 5 0.744639 0.6748729 0.0697665 1.7262e-03 1.3336e-02 weaklyHypermeth 1.6440e-02 1.0000e+00 weaklyHypermeth 1.7859e-02 1.7870e-01 weaklyHypermeth 1.9411e-01 1.0000e+00 insignificant 0.10268652 5.2818e-02 lowCoverage 5.6952e-01 lowCoverage 0.754593 0.800643 -0.04103038 5 0.744639 0.761279 -0.0166394 7.2043e-01 4.8590e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 5.9017e-01 2.3211e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04355312 3.5900e-01 lowCoverage 1.000000 lowCoverage 0.708455 0.800643 -0.0686227 5 0.6748729 0.761279 -0.08640591 8.0537e-01 8.6815e-02 insignificant 1.0000e+00 6.2011e-01 insignificant 8.4474e-01 1.4094e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.1462396 1.0449e-02 lowCoverage 2.3220e-01 lowCoverage chr17 76044550 76045550 51392 ENSG00000173818 0.76700 309 8 0.746304 355 8 0.723494 351 7 0.891131 237 7 0.872468 260 7 0.833922 558 7 0.8629932 325 7 0.817081 308 8 0.834818 329 7 0.924794 263 7 0.809403 368 8 0.8471685 182 8 0.763298 359 7 0.745537 135 3 0.872664 329 7 0.8075776 124 7 0.850102 154 5 0.907208 193 6 0.771635 529 7 0.829499 296 8 0.849749 179 8 0.597606 126 5 0.832380 258 8 0.829536 195 7 0.892546 44 3 0.827482 375 7 0.775841 257 7 0.876100 146 7 0.928997 239 7 0.808775 428 7 0.815788 521 7 0.857512 377 7 0.0751099 320 8 0.0973567 182 7 0.21420384 673 7 0.5694444 21 1 0.268912 273 7 0.6942714 357 7 0.756159 309 8 0.759297 233 8 0.825583 143 7 0.774638 217 7 0.818920 211 7 0.7994033 0.7810450 0.709227 0.917753 0.8395990 0.855250 0.872569 0.8438018 0.8283124 0.9235699 0.8363212 0.8962380 0.7354701 0.813849 0.8565042 0.8744969 0.869286 0.8691073 0.8034975 0.856271 0.846611 0.6309726 0.830013 0.809648 0.8275714 0.8503415 0.722598 0.862869 0.9096263 0.8310988 0.8139798 0.896753 0.0865396 0.1248474 0.1551460 0.57657183 0.309704 0.78966709 0.7383497 0.7718498 0.7685729 0.719862 0.793218 5 0.827632 0.833068 -0.00322231 7 0.803246 0.799302 0.00394390 0.7234550 3.0331e-01 insignificant 1.00000 1.000000 insignificant 0.4437619 0.75028470 insignificant 1 1.00000 insignificant -0.0004545 0.9867224 insignificant 1 insignificant 0.827632 0.305586 5.0277e-01 7 0.803246 0.2738856 0.5293602 5.4469e-44 1.0000e+00 hypermethylated 4.9517e-42 1.0000e+00 hypermethylated 1.2522e-13 1.0000e+00 hypermethylated 7.8265e-12 1.0000e+00 hypermethylated 0.5040218 4.5089e-03 weaklyHypermeth 8.9195e-02 weaklyHypermeth 0.827632 0.757412 0.0622957 8 0.803246 0.764520 0.03872572 1.7234e-03 7.4026e-01 weaklyHypermeth 3.9169e-02 1.0000e+00 weaklyHypermeth 1.3702e-02 8.9027e-01 weaklyHypermeth 2.8152e-01 1.0000e+00 insignificant 0.03698559 8.5171e-02 insignificant 1.0000e+00 insignificant 0.833068 0.305586 0.50560143 7 0.799302 0.2738856 0.5254163 1.3060e-29 1.0000e+00 hypermethylated 7.2554e-28 1.0000e+00 hypermethylated 7.4394e-12 1.0000e+00 hypermethylated 4.1330e-10 1.0000e+00 hypermethylated 0.50447632 4.0432e-03 weaklyHypermeth 7.7997e-02 weaklyHypermeth 0.833068 0.757412 0.06044113 7 0.799302 0.764520 0.0347818 4.5301e-02 9.5712e-01 weaklyHypermeth 6.4716e-01 1.0000e+00 insignificant 2.0288e-01 9.4678e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03744008 2.0034e-01 insignificant 1.000000 insignificant 0.305586 0.757412 -0.4326651 7 0.2738856 0.764520 -0.49063444 1.0000e+00 5.0646e-14 hypomethylated 1.0000e+00 3.8958e-12 hypomethylated 1.0000e+00 2.2793e-06 hypomethylated 1.0000e+00 1.0854e-04 hypomethylated -0.4670362 6.1732e-03 weaklyHypometh 1.5433e-01 insignificant chr17 76089650 76090650 51393 NPTX1 ENSG00000171246 0.86870 103 5 0.837819 49 3 0.730769 41 3 0.662778 54 5 0.726311 27 3 0.823108 130 5 0.8587302 35 3 0.909091 23 2 0.694118 37 3 0.771222 50 3 0.796296 62 3 0.7634921 18 3 0.730159 48 3 NA 0 0 0.790278 42 3 0.7222222 29 3 0.773485 29 3 0.904762 64 5 0.743056 47 3 0.894185 85 3 0.879630 22 2 0.727513 22 3 0.885417 57 3 0.761905 13 2 0.800000 15 3 0.880270 86 5 0.944444 16 2 0.888889 18 2 0.798718 30 3 0.875787 82 3 0.650449 101 5 0.732363 155 5 0.5980392 42 3 0.8095238 21 3 0.85855811 126 5 0.7823507 100 8 0.792424 25 2 0.8548611 112 5 0.747712 87 5 0.914159 122 5 0.883999 107 5 0.601293 64 3 0.884180 128 5 0.8401348 0.7976259 0.754725 0.615556 0.7317941 0.817285 0.823937 0.8872727 0.7204706 0.8424017 0.8318519 0.7375873 0.7479365 NA 0.7801667 0.7822222 0.828364 0.8000000 0.7658333 0.802544 0.914074 0.7013757 0.761111 0.770447 0.7520000 0.8339921 0.931111 0.862222 0.7990256 0.8045788 0.7555147 0.773634 0.6015686 0.7638095 0.7195538 0.62615488 0.804606 0.71614815 0.7353377 0.8148194 0.9480261 0.647042 0.794581 2 0.796296 0.804241 -0.00430793 3 0.871707 0.793518 0.07818882 0.4797058 7.7725e-01 lowCoverage 1.00000 1.000000 lowCoverage 0.8249882 0.84983566 lowCoverage 1 1.00000 lowCoverage -0.0292780 0.3457998 lowCoverage 1 lowCoverage 0.796087 0.769784 7.1941e-02 3 0.853379 0.8375949 0.0157841 4.0231e-02 7.4641e-01 lowCoverage 2.7938e-01 1.0000e+00 lowCoverage 2.1043e-01 9.4994e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0068779 8.7627e-01 lowCoverage 1.0000e+00 lowCoverage 0.796087 0.801980 0.0012449 3 0.853379 0.851385 0.00199435 6.4225e-01 7.0023e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 4.4438e-01 9.0061e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.01676444 7.9578e-01 lowCoverage 1.0000e+00 lowCoverage 0.805195 0.774648 0.06999022 3 0.793518 0.8578956 -0.0643778 1.7737e-01 6.5241e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 2.9678e-01 9.2610e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.03615592 4.5650e-01 lowCoverage 1.0000e+00 lowCoverage 0.805195 0.803150 0.00883527 3 0.793518 0.869962 -0.0764438 8.4873e-01 6.1205e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 6.7765e-01 8.7774e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.01251356 8.5196e-01 lowCoverage 1.000000 lowCoverage 0.774648 0.803150 -0.0314751 5 0.8578956 0.869962 -0.01206601 9.8572e-01 6.6580e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9731e-01 8.3722e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0236424 7.4738e-01 lowCoverage 1.0000e+00 lowCoverage chr17 76380350 76381350 51406 ENSG00000216958 1.00000 27 3 0.830507 111 5 0.788850 128 5 1.000000 7 0 0.845039 88 5 0.787222 56 5 0.9011481 178 5 0.903583 104 5 0.866206 108 5 0.889602 88 3 0.912778 123 5 0.8935673 79 3 0.872660 75 3 NA 0 0 0.769653 89 3 0.9303840 98 3 0.887673 145 3 0.333333 5 0 0.958851 112 5 0.875000 14 1 0.938235 41 3 0.500000 2 0 0.702778 25 2 0.966667 31 5 NA 0 0 0.856429 103 5 0.770000 16 1 0.966667 29 3 0.802129 49 5 0.932749 135 5 0.939513 182 5 0.881429 22 2 0.4056588 145 5 0.4000000 90 3 0.00000000 85 3 0.0000000 5 1 0.425000 39 5 0.4000000 89 5 1.000000 25 2 0.844444 52 4 1.000000 15 2 0.000000 2 0 1.000000 12 2 1.0000000 0.8603684 0.648084 1.000000 0.7417316 0.689815 0.881322 0.8393044 0.8881212 0.8160032 0.8962963 0.8935673 0.7877668 NA 0.7696531 0.8839734 0.887673 0.3333333 0.9314176 0.791667 0.897059 0.6004149 0.837963 0.944444 NA 0.8023810 0.616667 0.944444 0.7368814 0.9037876 0.9106831 0.802381 0.0290392 0.0000000 0.0000000 0.01054858 0.078704 0.00000000 0.7037037 0.7777778 1.0000000 0.333333 NA 0 0.858104 0.891339 -0.02570758 5 0.880569 0.900245 -0.01967601 0.8396607 1.6149e-01 insignificant 1.00000 1.000000 insignificant 0.3223494 0.70245936 insignificant 1 1.00000 insignificant 0.0135470 0.8037685 lowCoverage 1 lowCoverage 0.858104 0.198675 6.5947e-01 5 0.880569 0.3994821 0.4810871 4.5154e-34 7.5603e-01 hypermethylated 2.5085e-32 1.0000e+00 hypermethylated 6.3312e-07 9.8115e-01 hypermethylated 1.7111e-05 1.0000e+00 hypermethylated 0.5832791 5.2730e-04 lowCoverage 1.7517e-02 lowCoverage 0.858104 0.924528 -0.0048197 2 0.880569 0.840244 0.04032533 1.0398e-01 1.2240e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.8527e-01 1.2314e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.08616668 6.8364e-01 lowCoverage 1.0000e+00 lowCoverage 0.891339 0.198675 0.61505597 5 0.900245 0.3994821 0.5007631 1.6640e-27 9.2801e-01 hypermethylated 8.3201e-26 1.0000e+00 hypermethylated 7.1496e-06 9.4586e-01 hypermethylated 1.8332e-04 1.0000e+00 hypermethylated 0.56973212 4.3489e-04 lowCoverage 1.4496e-02 lowCoverage 0.891339 0.924528 0.01608756 2 0.900245 0.840244 0.0600013 3.5456e-02 2.2654e-01 lowCoverage 5.5400e-01 1.0000e+00 lowCoverage 6.4706e-01 9.5967e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.07261970 7.3238e-01 lowCoverage 1.000000 lowCoverage 0.198675 0.924528 -0.1812421 2 0.3994821 0.840244 -0.44076179 9.8493e-01 1.4922e-11 lowCoverage 1.0000e+00 5.9687e-10 lowCoverage 9.9864e-01 1.3778e-02 lowCoverage 1.0000e+00 2.0147e-01 lowCoverage -0.4971124 6.1575e-02 lowCoverage 6.6929e-01 lowCoverage chr17 76421050 76422050 51407 ENSG00000216958 0.11816 557 5 0.031384 188 6 0.151311 181 5 0.054493 540 5 0.213141 108 5 0.303303 697 5 0.0458526 196 7 0.227917 182 5 0.067690 218 5 0.127619 186 5 0.107005 211 5 0.2694486 91 5 0.010961 171 5 0.000000 2 0 0.075000 216 5 0.2433498 123 5 0.064090 246 5 0.163250 681 5 0.025497 195 5 0.040599 472 5 0.303274 80 5 0.032954 288 5 0.105228 300 5 0.268861 88 5 0.193077 115 5 0.035664 306 5 0.142341 180 5 0.039474 81 5 0.049299 94 5 0.023532 336 5 0.117312 409 5 0.454869 372 5 0.0129870 215 5 0.0000000 101 5 0.00000000 481 4 0.0178571 64 5 0.017857 73 5 0.1666667 295 5 0.008055 689 5 0.017495 540 5 0.017251 549 5 0.023354 477 5 0.056971 526 7 0.1495634 0.0397217 0.134185 0.077099 0.0478359 0.211267 0.065310 0.0758976 0.0909872 0.1125746 0.1702932 0.2732231 0.0123633 NA 0.0647111 0.2421340 0.063478 0.1547291 0.0182704 0.043641 0.157849 0.0254113 0.140417 0.184631 0.0346347 0.0504494 0.127078 0.039584 0.0661650 0.0329303 0.0100188 0.318758 0.0113953 0.0000000 0.0089941 0.01566852 0.017907 0.00000000 0.0159377 0.0267688 0.0176315 0.017303 0.060485 5 0.108974 0.100869 0.01102501 5 0.194619 0.209761 -0.01514233 0.8931274 8.6250e-01 insignificant 1.00000 1.000000 insignificant 0.6130306 0.93894736 insignificant 1 1.00000 insignificant -0.0301537 0.5031704 lowCoverage 1 lowCoverage 0.108871 0.004886 1.0230e-01 5 0.107367 0.0276419 0.0797249 7.7481e-09 1.0000e+00 weaklyHypermeth 1.2106e-07 1.0000e+00 weaklyHypermeth 5.2834e-09 1.0000e+00 weaklyHypermeth 1.8185e-07 1.0000e+00 weaklyHypermeth 0.0811087 3.2387e-02 lowCoverage 4.0484e-01 lowCoverage 0.108811 0.024820 0.0820320 5 0.093946 0.027786 0.06615950 7.4207e-05 1.0000e+00 weaklyHypermeth 2.1202e-03 1.0000e+00 weaklyHypermeth 1.5853e-04 1.0000e+00 weaklyHypermeth 7.9266e-03 1.0000e+00 weaklyHypermeth 0.09237795 3.9440e-04 lowCoverage 5.4689e-02 lowCoverage 0.100605 0.004882 0.09139888 5 0.110981 0.0241866 0.0867944 1.3435e-03 9.9999e-01 weaklyHypermeth 1.3302e-02 1.0000e+00 weaklyHypermeth 2.2738e-06 1.0000e+00 weaklyHypermeth 6.6876e-05 1.0000e+00 weaklyHypermeth 0.11126243 3.1047e-02 lowCoverage 3.9885e-01 lowCoverage 0.100491 0.024811 0.07217747 5 0.098650 0.024699 0.0739508 3.7291e-02 1.0000e+00 weaklyHypermeth 5.6877e-01 1.0000e+00 insignificant 2.2042e-02 1.0000e+00 weaklyHypermeth 4.8981e-01 1.0000e+00 insignificant 0.12253170 9.6931e-03 weaklyHypermeth 0.484656 insignificant 0.004882 0.024829 -0.0208215 5 0.0241866 0.027786 -0.00359982 9.9900e-01 1.6372e-03 weaklyHypometh 1.0000e+00 2.0723e-02 weaklyHypometh 9.9902e-01 2.8836e-03 weaklyHypometh 1.0000e+00 6.1051e-02 weaklyHypometh 0.0112693 6.9810e-01 lowCoverage 1.0000e+00 lowCoverage chr17 76479850 76480850 51410 ENSG00000216958 0.88011 85 6 0.874793 98 6 0.659319 214 6 0.955840 131 6 0.886364 87 6 0.929341 385 6 0.8552475 108 6 0.967469 118 6 0.974074 81 6 0.916032 135 6 0.924477 252 6 0.8000000 45 6 0.878305 98 6 0.857622 131 6 0.865435 129 6 0.8770396 105 6 NA 0 0 0.464485 175 6 0.822541 391 6 0.935224 215 6 0.883333 38 3 0.717172 68 6 0.927659 86 6 0.712197 84 6 0.857910 86 6 0.947703 197 6 0.774535 312 6 0.913736 129 6 0.876848 195 6 0.938253 199 6 0.889874 264 6 0.929760 219 6 0.5070285 164 6 0.0162698 116 6 0.56604436 238 3 0.0000000 9 0 0.091506 193 6 0.0133387 273 6 0.794847 95 6 0.813273 118 6 0.958333 48 6 0.744729 67 6 0.691201 98 6 0.8909736 0.8734994 0.661120 0.956183 0.8973859 0.926045 0.837854 0.9661702 0.9752980 0.9098181 0.9310603 0.7961373 0.8779125 0.855379 0.8579394 0.8969207 NA 0.4714817 0.8132924 0.930652 0.872532 0.7399207 0.921650 0.808523 0.8644205 0.9421417 0.779099 0.883509 0.8810610 0.9298049 0.8908159 0.920478 0.4865530 0.0134069 0.2810584 0.00000000 0.092038 0.01099152 0.8043078 0.8157141 0.9560086 0.710869 0.689745 6 0.850151 0.872465 -0.02273057 6 0.852612 0.877051 -0.02443947 0.8858631 2.7706e-01 insignificant 1.00000 1.000000 insignificant 0.6208167 0.33743991 insignificant 1 1.00000 insignificant -0.0049388 0.8932758 insignificant 1 insignificant 0.850151 0.239152 6.3890e-01 6 0.852612 0.2175991 0.6350126 8.0249e-36 1.0000e+00 hypermethylated 5.0155e-34 1.0000e+00 hypermethylated 1.4955e-14 1.0000e+00 hypermethylated 9.9699e-13 1.0000e+00 hypermethylated 0.6601116 1.2603e-03 lowCoverage 3.4062e-02 lowCoverage 0.850151 0.793427 0.0599186 6 0.852612 0.792370 0.06024207 5.4878e-02 9.7108e-01 insignificant 8.0703e-01 1.0000e+00 insignificant 4.1967e-02 9.8490e-01 weaklyHypermeth 7.6232e-01 1.0000e+00 insignificant 0.05866620 2.9907e-01 insignificant 1.0000e+00 insignificant 0.872136 0.238671 0.66121001 6 0.846996 0.1865135 0.6604827 6.2191e-33 1.0000e+00 hypermethylated 4.7839e-31 1.0000e+00 hypermethylated 1.7251e-12 1.0000e+00 hypermethylated 1.1501e-10 1.0000e+00 hypermethylated 0.66505043 1.2917e-03 lowCoverage 3.6094e-02 lowCoverage 0.872465 0.793427 0.08412300 6 0.877051 0.792370 0.0846815 4.6842e-03 9.9844e-01 weaklyHypermeth 9.4020e-02 1.0000e+00 weaklyHypermeth 4.4466e-02 9.9090e-01 weaklyHypermeth 8.5511e-01 1.0000e+00 insignificant 0.06360500 2.5494e-01 insignificant 1.000000 insignificant 0.239152 0.793427 -0.5749570 6 0.2175991 0.792370 -0.57477049 1.0000e+00 1.3479e-13 hypomethylated 1.0000e+00 8.9863e-12 hypomethylated 1.0000e+00 1.5266e-08 hypomethylated 1.0000e+00 1.0904e-06 hypomethylated -0.6014454 1.5608e-03 lowCoverage 6.2430e-02 lowCoverage chr17 76480150 76481150 51411 ENSG00000216958 0.88011 85 6 0.874793 98 6 0.659319 214 6 0.955840 131 6 0.886364 87 6 0.929341 385 6 0.8552475 108 6 0.967469 118 6 0.974074 81 6 0.916032 135 6 0.924477 252 6 0.8000000 45 6 0.878305 98 6 0.857622 131 6 0.865435 129 6 0.8770396 105 6 NA 0 0 0.464485 175 6 0.822541 391 6 0.935224 215 6 0.883333 38 3 0.717172 68 6 0.927659 86 6 0.712197 84 6 0.857910 86 6 0.947703 197 6 0.774535 312 6 0.913736 129 6 0.876848 195 6 0.938253 199 6 0.889874 264 6 0.929760 219 6 0.5070285 164 6 0.0162698 116 6 0.56604436 238 3 0.0000000 9 0 0.091506 193 6 0.0133387 273 6 0.794847 95 6 0.813273 118 6 0.958333 48 6 0.744729 67 6 0.691201 98 6 0.8909736 0.8734994 0.661120 0.956183 0.8973859 0.926045 0.837854 0.9661702 0.9752980 0.9098181 0.9310603 0.7961373 0.8779125 0.855379 0.8579394 0.8969207 NA 0.4714817 0.8132924 0.930652 0.872532 0.7399207 0.921650 0.808523 0.8644205 0.9421417 0.779099 0.883509 0.8810610 0.9298049 0.8908159 0.920478 0.4865530 0.0134069 0.2810584 0.00000000 0.092038 0.01099152 0.8043078 0.8157141 0.9560086 0.710869 0.689745 6 0.850151 0.872465 -0.02273057 6 0.852612 0.877051 -0.02443947 0.8858631 2.7706e-01 insignificant 1.00000 1.000000 insignificant 0.6208167 0.33743991 insignificant 1 1.00000 insignificant -0.0049388 0.8932758 insignificant 1 insignificant 0.850151 0.239152 6.3890e-01 6 0.852612 0.2175991 0.6350126 8.0249e-36 1.0000e+00 hypermethylated 5.0155e-34 1.0000e+00 hypermethylated 1.4955e-14 1.0000e+00 hypermethylated 9.9699e-13 1.0000e+00 hypermethylated 0.6601116 1.2603e-03 lowCoverage 3.4062e-02 lowCoverage 0.850151 0.793427 0.0599186 6 0.852612 0.792370 0.06024207 5.4878e-02 9.7108e-01 insignificant 8.0703e-01 1.0000e+00 insignificant 4.1967e-02 9.8490e-01 weaklyHypermeth 7.6232e-01 1.0000e+00 insignificant 0.05866620 2.9907e-01 insignificant 1.0000e+00 insignificant 0.872136 0.238671 0.66121001 6 0.846996 0.1865135 0.6604827 6.2191e-33 1.0000e+00 hypermethylated 4.7839e-31 1.0000e+00 hypermethylated 1.7251e-12 1.0000e+00 hypermethylated 1.1501e-10 1.0000e+00 hypermethylated 0.66505043 1.2917e-03 lowCoverage 3.6094e-02 lowCoverage 0.872465 0.793427 0.08412300 6 0.877051 0.792370 0.0846815 4.6842e-03 9.9844e-01 weaklyHypermeth 9.4020e-02 1.0000e+00 weaklyHypermeth 4.4466e-02 9.9090e-01 weaklyHypermeth 8.5511e-01 1.0000e+00 insignificant 0.06360500 2.5494e-01 insignificant 1.000000 insignificant 0.239152 0.793427 -0.5749570 6 0.2175991 0.792370 -0.57477049 1.0000e+00 1.3479e-13 hypomethylated 1.0000e+00 8.9863e-12 hypomethylated 1.0000e+00 1.5266e-08 hypomethylated 1.0000e+00 1.0904e-06 hypomethylated -0.6014454 1.5608e-03 lowCoverage 6.2430e-02 lowCoverage chr17 76597150 76598150 51414 ENSG00000222167 0.78115 242 6 0.530930 297 6 0.526384 74 4 0.822412 194 6 0.658333 48 3 0.782995 228 6 0.7338235 58 4 0.841389 99 4 0.846825 42 4 0.744709 32 4 0.636938 259 6 0.4444444 12 0 0.669591 59 3 0.732900 56 4 0.758428 61 4 0.8375000 29 3 NA 0 0 0.860036 162 4 0.852003 310 4 0.737731 131 5 0.621645 54 4 1.000000 6 0 0.781713 145 6 0.867965 39 4 0.797619 27 1 0.810643 284 6 0.729798 43 4 0.616667 41 4 0.848730 244 4 0.809681 272 6 0.838987 320 6 0.843607 193 5 0.7034648 119 6 0.6833739 125 3 0.65452004 360 6 1.0000000 13 1 0.804797 131 4 0.7199355 338 6 0.850366 202 6 0.814642 283 6 0.829814 226 6 0.609140 258 4 0.871910 231 6 0.7452204 0.6860914 0.568931 0.789897 0.7176568 0.741362 0.666899 0.7954520 0.7637611 0.6374765 0.7655341 0.6581921 0.7223351 0.790638 0.6745640 0.7991525 NA 0.7762889 0.8179338 0.658522 0.778854 0.8064627 0.730305 0.819943 0.7554479 0.7728524 0.623780 0.788983 0.7917965 0.7846532 0.8200919 0.788075 0.7196677 0.5998278 0.4921981 0.76724353 0.717846 0.71515013 0.7953195 0.8256590 0.8127073 0.781733 0.843131 0 0.793982 0.851918 -0.05115314 6 0.693302 0.653890 0.03941246 0.8247465 5.3082e-02 insignificant 1.00000 1.000000 insignificant 0.9788797 0.33285395 insignificant 1 1.00000 insignificant -0.0710168 0.0960285 lowCoverage 1 lowCoverage 0.795627 0.711786 9.4619e-02 5 0.775494 0.7160758 0.0594180 7.4619e-03 9.4506e-01 weaklyHypermeth 6.2182e-02 1.0000e+00 weaklyHypermeth 1.2841e-01 9.4405e-01 insignificant 9.5825e-01 1.0000e+00 insignificant -0.0347774 5.7196e-01 lowCoverage 1.0000e+00 lowCoverage 0.795044 0.866667 -0.0815531 6 0.712328 0.719530 -0.00720242 9.7462e-01 1.9586e-03 weaklyHypometh 1.0000e+00 1.9586e-01 insignificant 8.4375e-01 2.2993e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.06893672 2.5043e-01 lowCoverage 1.0000e+00 lowCoverage 0.858010 0.711786 0.15555528 5 0.821669 0.7160758 0.1055930 2.8162e-06 9.9628e-01 weaklyHypermeth 4.4702e-05 1.0000e+00 weaklyHypermeth 4.4586e-03 9.8687e-01 weaklyHypermeth 5.9448e-02 1.0000e+00 weaklyHypermeth 0.03623941 5.6327e-01 lowCoverage 1.0000e+00 lowCoverage 0.855932 0.866667 -0.02449350 6 0.704288 0.719530 -0.0152428 2.2960e-01 9.0944e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 4.7512e-01 1.8265e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00208007 9.7152e-01 lowCoverage 1.000000 lowCoverage 0.711786 0.867389 -0.1846740 5 0.7160758 0.839452 -0.12337634 9.7672e-01 3.3416e-04 weaklyHypometh 1.0000e+00 5.7614e-03 weaklyHypometh 9.8431e-01 6.2858e-03 weaklyHypometh 1.0000e+00 1.0838e-01 insignificant -0.0341593 6.3956e-01 lowCoverage 1.0000e+00 lowCoverage chr17 76632350 76633350 51415 BAIAP2 ENSG00000175866 0.83755 605 15 0.706099 270 14 0.690657 362 16 0.894279 514 15 0.840358 320 16 0.850542 1006 15 0.7069398 250 13 0.761784 430 16 0.851706 316 16 0.718686 286 16 0.787316 505 16 0.5881724 123 10 0.700047 461 16 0.819741 197 14 0.685030 392 16 0.6419082 126 8 0.783333 54 3 0.612911 911 15 0.770832 692 16 0.737202 472 15 0.739504 203 15 0.718295 189 11 0.894034 232 12 0.810643 202 11 0.765531 678 14 0.778641 471 16 0.601909 360 10 0.703289 155 9 0.836961 434 16 0.739273 459 16 0.822783 623 16 0.926275 623 16 0.5932309 419 16 0.6952580 428 16 0.66101056 294 12 0.6739669 207 10 0.460567 328 16 0.6713832 556 16 0.693529 492 15 0.734245 373 16 0.822169 503 14 0.648261 408 13 0.716773 363 13 0.8529340 0.8084086 0.715468 0.849849 0.8201759 0.796028 0.741039 0.7428386 0.7862339 0.7784463 0.8968916 0.7021542 0.7150745 0.801230 0.7589371 0.6383717 0.840573 0.6622380 0.7834807 0.801949 0.833349 0.6732755 0.796624 0.851148 0.6561078 0.7710256 0.687466 0.749970 0.7782530 0.7256076 0.7811955 0.919657 0.5505987 0.6600183 0.5574885 0.58694640 0.495349 0.69907708 0.7099033 0.6393540 0.7529165 0.634991 0.641830 7 0.820550 0.825400 -0.01101189 16 0.687326 0.720513 -0.03318643 0.9291403 1.4074e-01 insignificant 1.00000 1.000000 insignificant 0.9780729 0.24970292 insignificant 1 1.00000 insignificant -0.0288400 0.3728590 insignificant 1 insignificant 0.820528 0.603765 2.0039e-01 16 0.673732 0.5095168 0.1642151 3.2746e-17 9.9806e-01 hypermethylated 8.8503e-16 1.0000e+00 hypermethylated 5.4031e-05 9.9790e-01 hypermethylated 1.0195e-03 1.0000e+00 hypermethylated 0.1233521 1.6225e-02 weaklyHypermeth 2.5753e-01 insignificant 0.820959 0.828344 0.0502047 15 0.719508 0.732968 -0.01346033 1.5811e-03 6.4643e-01 weaklyHypermeth 3.6770e-02 1.0000e+00 weaklyHypermeth 1.3794e-02 9.3814e-01 weaklyHypermeth 2.8152e-01 1.0000e+00 insignificant 0.02625939 4.6721e-01 insignificant 1.0000e+00 insignificant 0.825654 0.603943 0.22399292 16 0.762179 0.5299536 0.2322259 1.7541e-14 9.9991e-01 hypermethylated 4.6162e-13 1.0000e+00 hypermethylated 5.9908e-04 9.9994e-01 hypermethylated 9.6625e-03 1.0000e+00 hypermethylated 0.15219210 6.0885e-03 weaklyHypermeth 1.1070e-01 insignificant 0.825390 0.828344 0.05619783 15 0.706468 0.732968 -0.0264994 4.7010e-03 9.4589e-01 weaklyHypermeth 9.4020e-02 1.0000e+00 weaklyHypermeth 3.4717e-03 9.9809e-01 weaklyHypermeth 1.1160e-01 1.0000e+00 insignificant 0.05509936 1.7989e-01 insignificant 1.000000 insignificant 0.604401 0.828264 -0.0883078 15 0.5421692 0.720252 -0.17808288 6.1520e-01 7.6343e-04 weaklyHypometh 1.0000e+00 1.1567e-02 weaklyHypometh 8.6145e-01 9.5569e-02 insignificant 1.0000e+00 7.8335e-01 insignificant -0.0970927 6.4424e-02 insignificant 6.8327e-01 insignificant chr17 76683550 76684550 51417 BAIAP2 ENSG00000175866 0.61584 420 17 0.456042 324 16 0.440158 384 17 0.555921 548 17 0.541264 163 15 0.600100 786 17 0.5573888 204 16 0.392811 413 13 0.518340 360 14 0.671140 268 17 0.665611 453 17 0.5556274 133 16 0.282518 590 17 0.617876 233 13 0.461798 371 17 0.4916778 104 11 0.345553 125 12 0.468125 656 15 0.383250 650 17 0.428384 478 17 0.762845 177 10 0.186482 350 16 0.568639 245 16 0.514335 195 13 0.470948 188 11 0.370360 518 17 0.461851 218 14 0.344395 209 14 0.374917 353 16 0.412584 555 17 0.426180 750 17 0.775519 432 16 0.1370632 474 16 0.1923152 328 16 0.41731771 390 14 0.0312500 136 11 0.139645 414 14 0.0512697 538 17 0.161516 611 17 0.265759 565 17 0.266706 561 14 0.235818 496 17 0.475418 543 13 0.5838359 0.4445541 0.422257 0.529894 0.4387022 0.577632 0.489775 0.4031986 0.4318643 0.5870703 0.6599987 0.4926854 0.2407990 0.577034 0.3726093 0.5562525 0.278645 0.4426057 0.3445737 0.388599 0.745596 0.1383593 0.594167 0.420645 0.4142483 0.3555891 0.441941 0.345773 0.3850531 0.3463118 0.3125690 0.784927 0.0690356 0.1545635 0.2325528 0.02053712 0.131882 0.03661111 0.1315583 0.1990287 0.1979684 0.195560 0.319296 11 0.503330 0.456563 0.04441829 17 0.569882 0.459665 0.11021721 0.0046253 9.9972e-01 weaklyHypermeth 0.81691 1.000000 insignificant 0.0725447 0.99935164 insignificant 1 1.00000 insignificant 0.0300500 0.5858386 insignificant 1 insignificant 0.503329 0.143421 3.6806e-01 17 0.566554 0.2012923 0.3652619 3.2356e-50 1.0000e+00 hypermethylated 3.5952e-48 1.0000e+00 hypermethylated 1.2282e-26 1.0000e+00 hypermethylated 2.0469e-24 1.0000e+00 hypermethylated 0.3409944 9.3061e-04 hypermethylated 2.7371e-02 hypermethylated 0.503006 0.181916 0.2400029 17 0.493979 0.261736 0.23224242 2.4059e-24 1.0000e+00 hypermethylated 8.0196e-22 1.0000e+00 hypermethylated 2.1235e-17 1.0000e+00 hypermethylated 1.0617e-14 1.0000e+00 hypermethylated 0.22142783 9.0068e-03 weaklyHypermeth 3.2053e-01 insignificant 0.456563 0.143484 0.32669510 17 0.459665 0.2113569 0.2483078 6.4697e-24 1.0000e+00 hypermethylated 2.9408e-22 1.0000e+00 hypermethylated 2.6624e-19 1.0000e+00 hypermethylated 4.4373e-17 1.0000e+00 hypermethylated 0.31094438 1.2994e-03 weaklyHypermeth 3.6094e-02 weaklyHypermeth 0.456589 0.181916 0.20806763 17 0.447645 0.261736 0.1859084 2.0776e-10 1.0000e+00 hypermethylated 2.3085e-08 1.0000e+00 hypermethylated 8.1148e-10 1.0000e+00 hypermethylated 2.0287e-07 1.0000e+00 hypermethylated 0.19137779 2.1365e-02 weaklyHypermeth 0.689207 insignificant 0.142857 0.181916 -0.1197019 17 0.1310081 0.261736 -0.13072822 1.0000e+00 4.3379e-12 weaklyHypometh 1.0000e+00 2.0657e-10 weaklyHypometh 1.0000e+00 8.1977e-12 weaklyHypometh 1.0000e+00 1.0247e-09 weaklyHypometh -0.1195666 1.5547e-01 insignificant 1.0000e+00 insignificant chr17 76873450 76874450 51419 C17orf56 ENSG00000167302 0.78960 236 9 0.828020 283 9 0.835127 197 9 0.821412 302 9 0.793732 134 5 0.673416 456 9 0.7049594 197 9 0.726243 196 9 0.746318 118 9 0.940972 108 9 0.795742 344 9 0.6490260 64 7 0.653896 156 9 0.938695 60 5 0.870766 117 9 0.7474747 37 3 0.916667 18 1 0.678146 268 9 0.913134 198 9 0.842847 292 9 0.885554 133 9 0.589252 102 7 0.792051 169 9 0.724972 98 6 0.812734 288 8 0.754853 248 9 0.777454 195 9 0.615252 50 4 0.747264 175 9 0.743414 280 9 0.863406 461 9 0.888998 317 9 0.2032509 229 9 0.7014515 284 9 0.50000000 182 2 0.3481041 264 7 0.410606 234 10 0.7970266 314 9 0.511335 272 9 0.740898 325 9 0.642527 276 9 0.642958 193 9 0.638801 251 9 0.8833865 0.8073530 0.820513 0.832282 0.8207221 0.876805 0.870067 0.8626970 0.8885173 0.9079143 0.8862189 0.8607941 0.7081839 0.899809 0.8746303 0.7804421 0.897419 0.6819586 0.9030889 0.887754 0.847470 0.6087925 0.806015 0.766748 0.9245987 0.8469963 0.823788 0.811555 0.7980355 0.8365720 0.7809514 0.945160 0.3751428 0.7781337 0.6801562 0.35543352 0.623559 0.76061096 0.5997135 0.6611672 0.6741121 0.673461 0.611991 2 0.844180 0.813519 0.02719644 9 0.701477 0.770976 -0.06949930 0.5831908 9.2457e-01 insignificant 1.00000 1.000000 insignificant 0.8823477 0.87823636 insignificant 1 1.00000 insignificant 0.0270427 0.4413446 insignificant 1 insignificant 0.844586 0.621102 2.1344e-01 9 0.724486 0.4135746 0.3109110 1.6780e-11 9.9975e-01 hypermethylated 3.1073e-10 1.0000e+00 hypermethylated 1.3625e-07 9.9995e-01 hypermethylated 3.7847e-06 1.0000e+00 hypermethylated 0.2999033 2.0358e-02 weaklyHypermeth 2.9938e-01 insignificant 0.848017 0.633739 0.2070245 9 0.855835 0.669049 0.18678599 4.5971e-21 1.0000e+00 hypermethylated 7.6618e-19 1.0000e+00 hypermethylated 2.7544e-10 1.0000e+00 hypermethylated 3.0604e-08 1.0000e+00 hypermethylated 0.15800574 7.2681e-03 weaklyHypermeth 3.1600e-01 insignificant 0.813768 0.621102 0.18411308 9 0.787912 0.4135746 0.3743373 1.0365e-07 9.9824e-01 weaklyHypermeth 1.9194e-06 1.0000e+00 weaklyHypermeth 1.9742e-05 9.9975e-01 weaklyHypermeth 4.5912e-04 1.0000e+00 weaklyHypermeth 0.27286053 2.8623e-02 weaklyHypermeth 3.7662e-01 insignificant 0.816867 0.633257 0.17942393 9 0.791055 0.621260 0.1697950 1.9704e-09 1.0000e+00 weaklyHypermeth 1.7913e-07 1.0000e+00 weaklyHypermeth 1.8852e-06 1.0000e+00 weaklyHypermeth 1.5710e-04 1.0000e+00 weaklyHypermeth 0.13096300 1.8947e-02 weaklyHypermeth 0.631573 insignificant 0.625335 0.633739 0.0009170 9 0.4641431 0.669049 -0.20490632 1.6954e-01 7.2143e-03 inconclusive 1.0000e+00 7.5940e-02 inconclusive 7.2096e-01 6.0275e-02 insignificant 1.0000e+00 5.6863e-01 insignificant -0.1418975 1.9355e-01 insignificant 1.0000e+00 insignificant chr17 76937650 76938650 51420 TMEM105 ENSG00000185332 0.90102 245 6 0.766040 305 6 0.686595 149 6 0.848614 234 4 0.928108 147 6 0.860450 758 6 0.8974238 128 6 0.869519 187 6 0.952429 149 4 0.914737 100 5 0.901107 263 6 0.7777778 31 3 0.803269 144 3 0.566468 136 4 0.687842 199 4 0.6666667 7 0 NA 0 0 0.642724 395 4 0.927901 636 6 0.893369 390 6 0.906923 94 6 1.000000 4 0 0.858585 151 6 0.887311 71 5 0.853472 68 4 0.877136 458 6 0.921311 232 6 0.920000 75 3 0.922113 368 4 0.877254 439 6 0.911015 636 6 0.935963 312 6 0.6694308 212 6 0.5584147 300 6 0.77906977 151 6 0.4193548 63 1 0.727500 106 6 0.2272039 417 6 0.603446 166 4 0.602024 263 6 0.599869 178 4 0.237990 320 4 0.739122 203 4 0.8671099 0.7869023 0.617549 0.883211 0.8962951 0.871005 0.935847 0.9155788 0.9149952 0.9020832 0.8558894 0.5887850 0.6347446 0.823876 0.7875747 0.7556809 NA 0.4343884 0.8678017 0.830322 0.930309 0.9990101 0.840287 0.897887 0.7420561 0.8779976 0.901633 0.926250 0.8552843 0.8447275 0.8972635 0.936143 0.5867341 0.2332370 0.7259291 0.26688644 0.582704 0.10010684 0.3695989 0.3677781 0.5345166 0.254530 0.629158 3 0.812079 0.886481 -0.07271067 6 0.834025 0.894287 -0.06026120 0.9991840 2.0993e-03 weaklyHypometh 1.00000 0.307143 insignificant 0.9984594 0.00328569 weaklyHypometh 1 0.81625 insignificant -0.0905519 0.0043801 lowCoverage 1 lowCoverage 0.812079 0.425140 4.0805e-01 6 0.834025 0.5142398 0.3197855 9.9458e-14 9.9915e-01 hypermethylated 2.1621e-12 1.0000e+00 hypermethylated 4.2867e-05 9.8548e-01 hypermethylated 8.7263e-04 1.0000e+00 hypermethylated 0.2518759 3.0438e-02 lowCoverage 4.0136e-01 lowCoverage 0.812079 0.476991 0.3628676 4 0.834025 0.561682 0.27234378 4.9799e-13 9.9999e-01 lowCoverage 4.1500e-11 1.0000e+00 lowCoverage 4.7478e-08 9.9784e-01 lowCoverage 3.6521e-06 1.0000e+00 lowCoverage 0.25888126 3.3662e-02 lowCoverage 7.6834e-01 lowCoverage 0.886481 0.425140 0.48620012 6 0.894287 0.5142398 0.3800467 1.1384e-15 9.9969e-01 hypermethylated 3.3494e-14 1.0000e+00 hypermethylated 2.6532e-05 9.9290e-01 hypermethylated 6.0300e-04 1.0000e+00 hypermethylated 0.34242784 9.8319e-03 lowCoverage 1.6952e-01 lowCoverage 0.886481 0.476991 0.45044634 4 0.894287 0.561682 0.3326050 2.9045e-20 1.0000e+00 lowCoverage 1.4522e-17 1.0000e+00 lowCoverage 2.4917e-07 9.9520e-01 lowCoverage 2.8663e-05 1.0000e+00 lowCoverage 0.34943320 1.3496e-02 lowCoverage 0.519094 lowCoverage 0.425140 0.476991 -0.0709907 4 0.5142398 0.561682 -0.04744174 8.2031e-01 4.0349e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 5.3139e-01 7.4868e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0070054 9.5463e-01 lowCoverage 1.0000e+00 lowCoverage chr17 77061650 77062650 51421 ENSG00000214094 0.89503 224 5 0.754177 162 5 0.649364 184 5 0.725072 220 5 0.819841 59 5 0.695450 313 6 0.8020487 136 5 0.760417 114 5 0.769055 128 5 0.759209 114 5 0.939342 189 5 0.7618795 90 5 0.676595 135 5 NA 0 0 0.949646 131 5 0.8392857 104 5 0.742522 134 5 0.673422 230 5 0.753089 134 5 0.772580 255 6 0.735609 115 5 0.473753 109 5 0.852052 160 5 0.776380 134 6 0.753175 60 5 0.742758 130 5 0.702583 108 6 0.727679 87 6 0.601035 110 5 0.640282 151 5 0.721604 214 5 0.775845 286 5 0.6222161 120 5 0.5181404 111 5 0.00000000 6 1 0.5719281 69 5 0.689665 108 6 0.6097967 154 5 0.640833 220 5 0.670153 258 5 0.652384 176 5 0.460510 273 5 0.682172 192 5 0.8988732 0.8490759 0.760736 0.852364 0.9460009 0.807421 0.949059 0.8901699 0.9287732 0.8952119 0.9259986 0.9163696 0.8004152 NA 0.9401757 0.9294113 0.882314 0.8033027 0.9013935 0.881782 0.846501 0.5679290 0.822804 0.913603 0.8962244 0.9063521 0.858459 0.870897 0.7691621 0.7840759 0.8628700 0.922310 0.7340289 0.6724171 NA 0.53980809 0.767725 0.70822697 0.6418418 0.6485722 0.7886400 0.451685 0.745251 5 0.859293 0.829327 0.02701319 5 0.751236 0.717742 0.03349358 0.1090427 9.4730e-01 insignificant 1.00000 1.000000 insignificant 0.0400502 0.99861408 weaklyHypermeth 1 1.00000 insignificant 0.0671224 0.0630503 lowCoverage 1 lowCoverage 0.859293 0.656690 2.0063e-01 5 0.751236 0.5772480 0.1739875 5.9732e-09 9.1554e-01 hypermethylated 9.4812e-08 1.0000e+00 hypermethylated 5.8902e-04 9.4098e-01 hypermethylated 9.6561e-03 1.0000e+00 hypermethylated 0.2737276 4.4558e-02 lowCoverage 5.1217e-01 lowCoverage 0.859293 0.640751 0.2384068 5 0.751236 0.527811 0.22342423 1.7946e-14 1.0000e+00 hypermethylated 1.7946e-12 1.0000e+00 hypermethylated 6.9779e-08 9.9999e-01 hypermethylated 4.9842e-06 1.0000e+00 hypermethylated 0.15447506 1.4407e-02 lowCoverage 4.3116e-01 lowCoverage 0.829327 0.656690 0.17391808 5 0.717742 0.5772480 0.1404940 5.8098e-04 7.8758e-01 weaklyHypermeth 6.1807e-03 1.0000e+00 weaklyHypermeth 3.5942e-02 6.8869e-01 weaklyHypermeth 3.2974e-01 1.0000e+00 insignificant 0.20660520 1.0326e-01 lowCoverage 9.4735e-01 lowCoverage 0.829327 0.640751 0.21787484 5 0.717742 0.527811 0.1899306 1.4680e-06 9.9993e-01 hypermethylated 8.1557e-05 1.0000e+00 hypermethylated 2.2895e-04 9.9923e-01 hypermethylated 1.4310e-02 1.0000e+00 hypermethylated 0.08735264 1.1610e-01 insignificant 1.000000 insignificant 0.656690 0.640751 0.0378761 5 0.5772480 0.527811 0.04943668 8.9130e-03 6.2446e-01 weaklyHypermeth 5.5706e-01 1.0000e+00 insignificant 6.1996e-02 7.2333e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.1192526 3.2021e-01 lowCoverage 1.0000e+00 lowCoverage chr17 77383550 77384550 51426 SLC25A10 ENSG00000183048 0.01884 2240 69 0.030762 2147 64 0.019336 3042 68 0.013112 1439 61 0.023980 1577 65 0.087882 3941 70 0.0088923 3110 69 0.023802 2062 66 0.022334 3007 66 0.021958 3157 67 0.010429 2523 67 0.0053614 3172 68 0.038867 2655 68 0.000000 305 9 0.015270 3093 69 0.0053099 2631 69 0.013309 4317 70 0.010941 1865 69 0.018401 2665 67 0.066219 2649 70 0.034563 972 60 0.014211 1426 63 0.054158 2196 69 0.048013 1140 70 0.019706 979 59 0.045739 2890 67 0.039005 1323 62 0.027171 958 61 0.011568 1931 60 0.018582 2809 68 0.017174 3770 69 0.041363 3082 69 0.0210404 1802 64 0.0455787 1736 65 0.02884615 1640 44 0.0091837 1158 60 0.044839 753 62 0.0401031 2220 62 0.023485 3126 68 0.012020 3104 68 0.012010 1683 66 0.018448 2654 68 0.031619 2484 66 0.0075588 0.0099137 0.010269 0.010588 0.0052797 0.019917 0.007511 0.0093776 0.0060879 0.0090936 0.0079085 0.0058523 0.0097875 NA 0.0093057 0.0054025 0.010209 0.0096573 0.0076516 0.014240 0.014758 0.0099917 0.031546 0.020350 0.0063922 0.0085639 0.013979 0.017016 0.0079978 0.0085046 0.0053032 0.018638 0.0081769 0.0212428 0.0051496 0.00367024 0.018528 0.01071861 0.0072117 0.0074989 0.0077136 0.011275 0.011014 54 0.010950 0.013631 -0.00260089 68 0.030677 0.035406 -0.00472915 0.9281552 2.8996e-01 insignificant 1.00000 1.000000 insignificant 0.7150051 0.81703852 insignificant 1 1.00000 insignificant -0.0081873 0.2054369 insignificant 1 insignificant 0.010950 0.010742 -7.3660e-04 64 0.030677 0.0428456 -0.0121684 1.9047e-02 7.1006e-01 inconclusive 1.4109e-01 1.0000e+00 insignificant 6.0307e-02 9.9743e-01 insignificant 5.2441e-01 1.0000e+00 insignificant -0.0088482 2.6594e-01 insignificant 1.0000e+00 insignificant 0.010950 0.009961 0.0031523 68 0.030677 0.029739 0.00093819 2.5264e-02 3.8960e-01 weaklyHypermeth 4.2820e-01 1.0000e+00 insignificant 2.3088e-01 8.2670e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00323388 5.9551e-01 insignificant 1.0000e+00 insignificant 0.013631 0.010742 0.00183860 64 0.035406 0.0428456 -0.0074392 3.1871e-01 9.9958e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.9251e-01 9.9997e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00066097 9.2973e-01 insignificant 1.0000e+00 insignificant 0.013631 0.009961 0.00528457 67 0.035406 0.029739 0.0056673 3.6196e-01 9.9954e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.1416e-01 9.9997e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01142115 6.3607e-02 insignificant 1.000000 insignificant 0.010742 0.009961 0.0032490 63 0.0428456 0.029739 0.01310655 9.9589e-01 9.3134e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.0000e+00 9.9632e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0120821 1.2303e-01 insignificant 1.0000e+00 insignificant chr17 77449650 77450650 51427 ANAPC11 ENSG00000141552 0.99000 85 5 0.963636 33 2 0.450000 18 0 0.895298 90 5 1.000000 6 0 0.882764 219 5 0.4666667 12 0 0.843573 61 5 0.800000 29 5 1.000000 12 0 0.954194 149 5 1.0000000 3 0 0.842857 45 3 0.649660 23 3 0.960000 19 3 NA 0 0 NA 0 0 0.721120 128 5 0.933188 148 5 0.887879 62 5 0.878869 60 5 0.885714 33 5 0.904762 21 3 0.785714 32 5 0.932023 334 5 0.763219 86 5 0.979474 84 5 NA 0 0 0.876167 98 5 0.893910 67 5 0.907249 115 5 0.976667 122 5 0.4125000 55 3 0.2440476 140 5 0.40000000 59 3 1.0000000 30 2 0.516667 55 5 0.3727273 101 5 0.819444 27 3 0.964706 75 5 0.921429 37 5 0.920000 17 3 0.650000 54 5 1.0000000 1.0000000 0.416667 0.848485 1.0000000 0.932194 0.444444 0.7878788 1.0000000 1.0000000 0.9347670 1.0000000 0.8492063 0.849206 0.9333333 NA NA 0.5447246 0.9071795 0.775758 0.757738 0.8095238 0.904762 0.904762 0.8871378 0.8958333 0.965789 NA 0.8390666 0.8440171 0.9128483 0.983333 0.0208333 0.0416667 0.0000000 NA 0.083333 0.00000000 0.7222222 0.9411765 0.9166667 0.866667 0.500000 0 0.895614 0.908745 -0.01681895 5 0.781951 0.818238 -0.03628698 0.8767074 4.8211e-01 insignificant 1.00000 1.000000 insignificant 0.7972994 0.75103786 insignificant 1 1.00000 insignificant -0.0427204 0.3543013 lowCoverage 1 lowCoverage 0.896309 0.313636 5.2214e-01 5 0.828943 0.4601811 0.3687618 7.9327e-25 9.9316e-01 hypermethylated 2.8331e-23 1.0000e+00 hypermethylated 1.5309e-06 9.6382e-01 hypermethylated 3.7339e-05 1.0000e+00 hypermethylated 0.3557228 1.9489e-02 lowCoverage 2.9529e-01 lowCoverage 0.896309 0.847619 0.0393925 5 0.828943 0.878462 -0.04951922 3.6394e-01 8.7781e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.4072e-01 7.6395e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00840271 9.0658e-01 lowCoverage 1.0000e+00 lowCoverage 0.909524 0.313636 0.59541908 5 0.871278 0.4601811 0.4110966 1.2676e-30 9.9813e-01 hypermethylated 7.9225e-29 1.0000e+00 hypermethylated 5.6484e-06 9.9354e-01 hypermethylated 1.4864e-04 1.0000e+00 hypermethylated 0.39844320 1.3366e-02 lowCoverage 2.0884e-01 lowCoverage 0.909524 0.847619 0.06016771 5 0.871278 0.878462 -0.0071844 1.1965e-01 9.7048e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.3889e-01 9.6069e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03431768 5.9223e-01 lowCoverage 1.000000 lowCoverage 0.313636 0.847619 -0.5376956 5 0.4601811 0.878462 -0.41828105 9.9999e-01 1.6589e-10 hypomethylated 1.0000e+00 6.1440e-09 hypomethylated 9.9735e-01 3.5210e-04 hypomethylated 1.0000e+00 1.1003e-02 hypomethylated -0.3641255 1.8900e-02 lowCoverage 3.3632e-01 lowCoverage chr17 77542350 77543350 51429 ASPSCR1 ENSG00000169696 0.67206 680 20 0.489901 773 21 0.477664 925 21 0.584920 718 19 0.422686 532 21 0.763375 1494 22 0.6687651 725 21 0.523268 791 21 0.381705 800 22 0.593843 856 21 0.634861 914 21 0.5056498 545 21 0.298825 1058 21 0.488042 520 14 0.464963 1024 21 0.5531541 381 18 0.389336 483 22 0.520748 951 21 0.404127 1242 21 0.524862 770 21 0.568407 345 21 0.252148 592 16 0.646133 569 21 0.575759 449 21 0.581681 350 17 0.637974 1113 21 0.541380 721 21 0.518842 389 21 0.464983 684 21 0.464849 1300 21 0.381031 1702 21 0.832334 948 21 0.2473299 957 22 0.3090229 685 21 0.26247911 870 20 0.2554383 146 13 0.178888 624 20 0.2529952 1144 21 0.389033 831 20 0.425055 851 21 0.458401 637 17 0.372988 732 19 0.441562 799 19 0.6112964 0.4352109 0.450682 0.508273 0.4252011 0.755802 0.630784 0.4665330 0.4216213 0.5618726 0.6394262 0.4728117 0.2813578 0.494908 0.4472110 0.5009555 0.328315 0.4518843 0.3277155 0.467507 0.638874 0.2424027 0.631244 0.619015 0.5529742 0.5792519 0.492785 0.505520 0.4371840 0.3740762 0.3070210 0.805372 0.1756036 0.2160748 0.2121354 0.19148805 0.211321 0.20012882 0.3166276 0.3206498 0.3205306 0.298807 0.355992 17 0.523112 0.507531 0.00918197 21 0.508974 0.466955 0.04201879 0.6248931 6.0415e-01 insignificant 1.00000 1.000000 insignificant 0.9962652 0.34312351 insignificant 1 1.00000 insignificant -0.0206558 0.6769116 insignificant 1 insignificant 0.523406 0.225260 3.0458e-01 21 0.531795 0.2325549 0.2992397 1.0695e-57 1.0000e+00 hypermethylated 1.5279e-55 1.0000e+00 hypermethylated 3.0111e-31 1.0000e+00 hypermethylated 1.0037e-28 1.0000e+00 hypermethylated 0.2671121 1.0622e-08 hypermethylated 1.0622e-06 hypermethylated 0.523379 0.299740 0.1604002 20 0.531466 0.386694 0.14477194 7.7408e-12 9.9383e-01 weaklyHypermeth 5.9545e-10 1.0000e+00 weaklyHypermeth 1.6150e-11 9.9356e-01 weaklyHypermeth 3.2299e-09 1.0000e+00 weaklyHypermeth 0.10072974 2.8952e-03 weaklyHypermeth 1.7180e-01 insignificant 0.507976 0.225260 0.29704801 21 0.494382 0.2325549 0.2618271 8.8435e-28 1.0000e+00 hypermethylated 4.6545e-26 1.0000e+00 hypermethylated 7.4146e-23 1.0000e+00 hypermethylated 1.4829e-20 1.0000e+00 hypermethylated 0.28776787 1.6411e-05 hypermethylated 9.6537e-04 hypermethylated 0.508091 0.299740 0.16071286 20 0.512748 0.386694 0.1260541 7.5743e-06 9.9941e-01 weaklyHypermeth 3.2932e-04 1.0000e+00 weaklyHypermeth 3.5670e-07 9.9987e-01 weaklyHypermeth 3.5670e-05 1.0000e+00 weaklyHypermeth 0.12138554 1.7026e-02 weaklyHypermeth 0.630580 insignificant 0.225040 0.299740 -0.1297454 20 0.2452556 0.386694 -0.14143875 1.0000e+00 7.2489e-28 weaklyHypometh 1.0000e+00 1.0356e-25 weaklyHypometh 1.0000e+00 6.0380e-13 weaklyHypometh 1.0000e+00 1.2076e-10 weaklyHypometh -0.1663823 5.6081e-05 weaklyHypometh 5.0983e-03 weaklyHypometh chr17 77654250 77655250 51430 FASN ENSG00000169710 0.37634 415 12 0.370878 461 13 0.420987 610 13 0.437327 407 11 0.465867 468 13 0.439546 926 13 0.5220919 415 13 0.468121 395 13 0.289423 493 13 0.417419 596 13 0.580980 613 13 0.6072607 397 11 0.285729 464 13 0.476202 354 10 0.435350 499 13 0.4949064 319 6 0.302676 225 6 0.427693 598 13 0.185619 941 13 0.286395 388 13 0.391578 217 13 0.198412 232 10 0.257586 361 13 0.330386 329 11 0.354861 477 11 0.374967 612 13 0.443273 547 13 0.391165 252 13 0.445310 432 13 0.354908 666 13 0.290723 1000 13 0.667493 385 13 0.4664738 350 13 0.5781622 408 13 0.63995726 626 12 0.3824003 135 7 0.630107 375 13 0.6162886 542 13 0.244034 487 11 0.236103 389 8 0.230445 421 9 0.383174 382 8 0.347756 296 12 0.4111575 0.3781906 0.378842 0.480814 0.4967855 0.382421 0.616512 0.4959115 0.3119403 0.3671337 0.6298220 0.5392397 0.2635711 0.462396 0.4647056 0.5300260 0.398531 0.4346644 0.1648894 0.296950 0.365118 0.2013732 0.289687 0.298262 0.3889684 0.3770322 0.406963 0.441000 0.4870967 0.3828022 0.3234288 0.668800 0.4050731 0.4875398 0.5005608 0.35197766 0.750841 0.56333972 0.1422102 0.2794207 0.1888378 0.318142 0.323422 7 0.401142 0.375567 0.01132256 13 0.356060 0.332033 0.02402707 0.4581542 9.4963e-01 insignificant 1.00000 1.000000 insignificant 0.3353388 0.99877285 insignificant 1 1.00000 insignificant 0.0394856 0.3483409 insignificant 1 insignificant 0.401282 0.582991 -1.7675e-01 13 0.389393 0.5203801 -0.1309871 9.9940e-01 1.6343e-19 weaklyHypometh 1.0000e+00 8.1717e-17 weaklyHypometh 9.9966e-01 3.0634e-08 weaklyHypometh 1.0000e+00 3.0634e-05 weaklyHypometh -0.1376909 2.1589e-02 weaklyHypometh 3.0466e-01 insignificant 0.401163 0.206076 0.1606256 9 0.393938 0.231546 0.16239272 5.2573e-10 1.0000e+00 weaklyHypermeth 3.5048e-08 1.0000e+00 weaklyHypermeth 1.6365e-08 1.0000e+00 weaklyHypermeth 1.4877e-06 1.0000e+00 weaklyHypermeth 0.12623818 1.1424e-02 weaklyHypermeth 3.6852e-01 insignificant 0.375635 0.583231 -0.17957420 13 0.351564 0.5509907 -0.1994267 1.0000e+00 7.2610e-17 weaklyHypometh 1.0000e+00 7.2610e-14 weaklyHypometh 1.0000e+00 1.1420e-09 weaklyHypometh 1.0000e+00 1.1420e-06 weaklyHypometh -0.17717650 7.5024e-03 weaklyHypometh 1.3397e-01 insignificant 0.375636 0.206076 0.15900852 9 0.348439 0.231546 0.1168936 4.1650e-07 1.0000e+00 weaklyHypermeth 2.6031e-05 1.0000e+00 weaklyHypermeth 8.9981e-06 9.9996e-01 weaklyHypermeth 5.9988e-04 1.0000e+00 weaklyHypermeth 0.08675263 8.6558e-02 insignificant 1.000000 insignificant 0.583539 0.206076 0.3295318 9 0.5577895 0.231546 0.32624385 7.1229e-18 1.0000e+00 hypermethylated 7.1229e-15 1.0000e+00 hypermethylated 2.3334e-08 1.0000e+00 hypermethylated 7.7782e-06 1.0000e+00 hypermethylated 0.2639291 8.7017e-04 hypermethylated 5.4386e-02 hypermethylated chr17 77669050 77670050 51431 FASN ENSG00000169710 0.91635 284 7 0.819220 354 7 0.894226 416 7 0.939990 86 4 0.883532 231 7 0.869672 442 7 0.8897117 443 7 0.943350 298 7 0.874029 297 7 0.947855 343 7 0.851294 345 7 0.9026516 172 7 0.909689 405 7 NA 0 0 0.843547 318 7 0.9469463 158 7 0.881579 339 7 0.931378 96 6 0.899507 464 7 0.910717 312 7 0.946939 83 7 0.858050 37 4 0.887642 208 7 0.903957 140 7 0.726852 42 4 0.922141 448 7 0.909921 95 7 0.890907 99 5 0.914821 406 7 0.880187 559 7 0.926050 793 7 0.921752 334 7 0.7359465 393 7 0.7916173 250 7 0.71212121 142 6 0.7520408 40 4 0.680726 137 7 0.3883781 554 7 0.851353 183 7 0.824935 315 7 0.866933 84 4 0.761944 217 6 0.929176 110 4 0.8989747 0.8083612 0.896969 0.906269 0.9025634 0.856731 0.896146 0.9429623 0.8616827 0.9490096 0.8161055 0.8803237 0.9021630 NA 0.8171720 0.9528321 0.890784 0.8883029 0.8905914 0.894630 0.958195 0.7822075 0.869288 0.865032 0.8380542 0.9248121 0.910842 0.925055 0.9373714 0.8639899 0.9117554 0.907029 0.7819675 0.7867705 0.8208878 0.70254707 0.759954 0.42319110 0.8853231 0.8262109 0.8952447 0.737572 0.913601 4 0.894020 0.914920 -0.01928955 7 0.890831 0.908184 -0.01735302 0.9751348 4.7771e-02 weaklyHypometh 1.00000 1.000000 insignificant 0.8980609 0.19075476 insignificant 1 1.00000 insignificant 0.0068763 0.7133324 insignificant 1 insignificant 0.894020 0.608179 2.8742e-01 7 0.890831 0.6099096 0.2809210 2.8286e-21 1.0000e+00 hypermethylated 9.1245e-20 1.0000e+00 hypermethylated 3.6302e-05 9.9959e-01 hypermethylated 7.5630e-04 1.0000e+00 hypermethylated 0.2208395 1.3550e-02 weaklyHypermeth 2.2967e-01 insignificant 0.894020 0.826183 0.0518670 7 0.890831 0.825864 0.06496673 4.3032e-05 9.9996e-01 weaklyHypermeth 1.3040e-03 1.0000e+00 weaklyHypermeth 9.9136e-02 9.9387e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.05077594 1.3804e-01 insignificant 1.0000e+00 insignificant 0.914920 0.608179 0.30661123 7 0.908184 0.6099096 0.2982740 1.7446e-16 1.0000e+00 hypermethylated 5.6279e-15 1.0000e+00 hypermethylated 1.4712e-04 9.9995e-01 hypermethylated 3.0024e-03 1.0000e+00 hypermethylated 0.21396319 1.4374e-02 weaklyHypermeth 2.2114e-01 insignificant 0.914920 0.826183 0.07607774 7 0.908184 0.825864 0.0823197 3.7884e-06 9.9981e-01 weaklyHypermeth 1.8942e-04 1.0000e+00 weaklyHypermeth 6.3116e-02 9.5422e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.04389968 2.0994e-01 insignificant 1.000000 insignificant 0.608179 0.826183 -0.1974852 7 0.6099096 0.825864 -0.21595429 1.0000e+00 1.6927e-04 weaklyHypometh 1.0000e+00 3.0777e-03 weaklyHypometh 9.9548e-01 7.5176e-03 weaklyHypometh 1.0000e+00 1.2324e-01 insignificant -0.1700635 3.6141e-02 weaklyHypometh 4.6936e-01 insignificant chr17 77693950 77694950 51432 ENSG00000209208 0.64175 115 5 0.742987 109 5 0.562351 60 5 0.739226 128 5 0.682540 44 5 0.733555 220 5 0.6250000 24 2 0.636667 72 5 0.562291 58 5 0.742424 31 2 0.595099 153 5 0.5357143 20 2 0.772952 55 2 0.770833 50 5 0.783399 55 5 0.7083333 18 0 0.800000 6 0 0.520919 96 5 0.720874 70 5 0.701880 103 5 0.743717 42 5 0.620000 36 5 0.645186 72 5 0.637500 54 5 0.663333 55 5 0.609680 103 5 0.782519 57 5 0.533333 15 0 0.715220 78 5 0.824212 130 5 0.746722 112 5 0.696250 162 5 0.6194780 77 5 0.6611264 73 5 0.62451178 89 5 0.7000000 21 2 0.528392 78 5 0.7278371 119 5 0.647735 93 5 0.603333 80 5 0.724687 102 5 0.701658 71 5 0.709794 72 5 0.6760582 0.6676253 0.584292 0.768389 0.6203704 0.706753 0.703125 0.6631944 0.6307827 0.7159091 0.7169024 0.5625000 0.7783333 0.744792 0.7218089 0.6979167 0.875000 0.5955480 0.7178448 0.648825 0.712550 0.6458333 0.713089 0.677083 0.6888889 0.6563479 0.782621 0.437500 0.7162431 0.7561778 0.7148033 0.685256 0.6485825 0.6944540 0.6318322 0.72916667 0.583754 0.69742759 0.7086020 0.6513889 0.7145318 0.713569 0.714653 2 0.686617 0.703057 -0.01804648 5 0.665483 0.760281 -0.09479767 0.9131129 1.8770e-01 insignificant 1.00000 1.000000 insignificant 0.7755666 0.59233938 insignificant 1 1.00000 insignificant -0.0058665 0.8505581 lowCoverage 1 lowCoverage 0.685072 0.653509 3.3025e-02 5 0.665010 0.6262615 0.0387482 1.8260e-01 9.4659e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.0057e-01 9.5998e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0353820 3.3313e-01 lowCoverage 1.0000e+00 lowCoverage 0.687584 0.708134 -0.0138982 5 0.709730 0.673114 0.03661581 4.4191e-01 3.5678e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.1578e-01 5.4834e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00149821 9.6102e-01 lowCoverage 1.0000e+00 lowCoverage 0.700883 0.653509 0.05158724 5 0.689393 0.6262615 0.0631316 3.6928e-02 9.9165e-01 weaklyHypermeth 2.6320e-01 1.0000e+00 insignificant 1.3217e-01 9.6689e-01 insignificant 9.5088e-01 1.0000e+00 insignificant 0.04124843 2.9091e-01 lowCoverage 1.0000e+00 lowCoverage 0.702407 0.708134 0.00199362 5 0.720328 0.673114 0.0472131 1.5168e-01 4.5268e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.0949e-01 4.8917e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00736467 8.2602e-01 lowCoverage 1.000000 lowCoverage 0.653509 0.708434 -0.0475822 5 0.6262615 0.674404 -0.04814252 8.1526e-01 1.5664e-02 weaklyHypometh 1.0000e+00 1.4639e-01 insignificant 9.0438e-01 6.1639e-02 insignificant 1.0000e+00 5.7465e-01 insignificant -0.0338838 3.7894e-01 lowCoverage 1.0000e+00 lowCoverage chr17 77754450 77755450 51433 CCDC57 ENSG00000176155 0.90864 241 5 0.842190 179 5 0.785050 133 5 0.918389 237 7 0.940000 51 5 0.737296 444 8 0.7698810 70 5 0.869237 144 5 0.705078 128 5 0.707608 109 5 0.730614 173 5 0.7968831 52 5 0.836299 202 5 0.782143 41 4 0.918917 149 5 0.8448039 46 4 0.720000 62 5 0.757252 262 5 0.968734 209 5 0.939420 213 5 0.782635 90 5 0.786310 126 5 0.797011 118 5 0.801616 90 5 0.837908 68 4 0.865421 216 7 0.778165 80 5 0.842022 88 5 0.831061 148 5 0.948582 201 5 0.875200 297 5 0.774964 346 6 0.7796908 226 5 0.7899036 103 5 1.00000000 62 4 0.8622449 38 5 0.867155 104 5 0.9318864 198 8 0.967787 263 7 0.962355 284 5 0.816248 168 5 0.781171 264 7 0.853526 242 8 0.8630549 0.8780423 0.773418 0.884030 0.9618852 0.875257 0.772329 0.8825668 0.7570615 0.7394809 0.8464934 0.8172131 0.8662497 0.811199 0.9065234 0.8583554 0.734778 0.8754857 0.9648558 0.912208 0.744421 0.8111080 0.758048 0.861290 0.7885574 0.8687131 0.808192 0.877397 0.8411685 0.9259831 0.8947144 0.841941 0.7445898 0.7388047 0.8939882 0.86577869 0.873279 0.90037056 0.9358556 0.9224313 0.7881223 0.855104 0.793917 5 0.867600 0.853854 0.01681922 5 0.884184 0.832578 0.05160612 0.1392274 7.7935e-01 insignificant 1.00000 1.000000 insignificant 0.3708198 0.61331127 insignificant 1 1.00000 insignificant -0.0028193 0.9087298 insignificant 1 insignificant 0.867600 0.857729 2.1720e-02 5 0.884184 0.8888420 -0.0046575 5.6635e-01 6.9008e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4231e-01 3.1977e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0478916 2.5695e-01 insignificant 1.0000e+00 insignificant 0.867048 0.872951 -0.0055620 5 0.723424 0.836066 -0.11264271 9.6541e-01 7.8269e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8921e-01 7.5943e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.05229550 2.6460e-01 insignificant 1.0000e+00 insignificant 0.853854 0.857729 0.00401824 5 0.832578 0.8888420 -0.0562636 7.3346e-01 1.7572e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7615e-01 2.1344e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04507230 2.6774e-01 insignificant 1.0000e+00 insignificant 0.853854 0.873563 -0.02344025 5 0.832578 0.910748 -0.0781694 9.9470e-01 8.4635e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9254e-01 3.8890e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04947621 2.7732e-01 insignificant 1.000000 insignificant 0.857729 0.873563 -0.0263600 5 0.8888420 0.910748 -0.02190585 8.0782e-01 7.6486e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.1394e-01 9.7769e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0044039 9.3348e-01 insignificant 1.0000e+00 insignificant chr17 77766350 77767350 51435 CCDC57 ENSG00000176155 0.79203 365 9 0.898476 552 9 0.734316 193 9 0.946184 327 9 0.818196 136 6 0.888173 1120 9 0.7970170 253 7 0.901726 346 9 0.820944 199 9 0.817317 141 8 0.917123 498 9 0.8173611 46 5 0.916425 227 8 0.935644 140 6 0.907256 191 9 0.8680556 50 4 0.978214 556 5 0.839958 354 8 0.824703 1064 9 0.911209 557 9 0.832997 153 9 0.961538 35 3 0.943670 345 8 0.914921 135 9 0.929167 54 8 0.911697 636 9 0.931944 190 9 0.970174 152 4 0.861314 677 9 0.901282 671 9 0.819279 1012 9 0.723506 537 9 0.5510494 368 9 0.4489959 371 9 0.25162920 248 8 0.7717949 30 3 0.483136 330 9 0.5693488 621 10 0.726716 414 8 0.920837 445 9 0.920414 219 8 0.835306 447 8 0.899550 256 9 0.7918771 0.8530135 0.705414 0.924471 0.8618696 0.929451 0.849506 0.8942067 0.8773589 0.8817549 0.8996578 0.8306584 0.9017785 0.909439 0.9032009 0.9032922 0.980222 0.7670530 0.9082868 0.912429 0.814394 0.9057454 0.948013 0.941211 0.9166667 0.9267973 0.890869 0.943345 0.8641047 0.9232395 0.9214555 0.881343 0.5415439 0.2467382 0.3695713 0.47241922 0.496904 0.55798642 0.8706735 0.9033964 0.8925225 0.826494 0.912241 4 0.891397 0.911624 -0.01997387 9 0.877523 0.912423 -0.03490034 0.9552233 1.1557e-01 insignificant 1.00000 1.000000 insignificant 0.9998205 0.04839119 weaklyHypometh 1 1.00000 insignificant -0.0252746 0.3209717 insignificant 1 insignificant 0.891397 0.475610 4.2859e-01 9 0.877523 0.5066206 0.3709025 1.0511e-45 1.0000e+00 hypermethylated 1.0511e-43 1.0000e+00 hypermethylated 3.5588e-15 1.0000e+00 hypermethylated 2.7376e-13 1.0000e+00 hypermethylated 0.3538572 3.3158e-03 weaklyHypermeth 7.3684e-02 weaklyHypermeth 0.891397 0.878158 0.0150112 9 0.877523 0.842278 0.03524495 1.3068e-01 6.0941e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.5115e-01 5.9345e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00595161 8.8591e-01 insignificant 1.0000e+00 insignificant 0.911624 0.475610 0.44607068 9 0.912423 0.5066206 0.4058029 3.7440e-33 1.0000e+00 hypermethylated 3.7440e-31 1.0000e+00 hypermethylated 1.9344e-13 1.0000e+00 hypermethylated 1.4880e-11 1.0000e+00 hypermethylated 0.37913176 2.0666e-03 weaklyHypermeth 4.5924e-02 weaklyHypermeth 0.911624 0.878158 0.03413330 9 0.912423 0.842278 0.0701453 5.9593e-03 6.5599e-01 weaklyHypermeth 1.1685e-01 1.0000e+00 insignificant 6.9139e-02 9.6531e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03122616 4.8536e-01 insignificant 1.000000 insignificant 0.475610 0.878158 -0.4068472 9 0.5066206 0.842278 -0.33565756 1.0000e+00 1.0392e-15 hypomethylated 1.0000e+00 9.4471e-14 hypomethylated 1.0000e+00 6.3329e-10 hypomethylated 1.0000e+00 5.2775e-08 hypomethylated -0.3479056 2.6229e-03 weaklyHypometh 8.1966e-02 weaklyHypometh chr17 77768350 77769350 51436 CCDC57 ENSG00000176155 0.80998 469 17 0.570877 447 19 0.709096 240 14 0.866250 103 9 0.601190 64 7 0.869904 746 17 0.5277778 59 6 0.852027 266 11 0.833062 120 14 0.905232 117 9 0.796636 366 11 0.3617216 60 1 0.771391 206 11 0.739027 113 11 0.721237 90 11 0.3571429 26 1 0.323810 22 3 0.579453 771 17 0.829603 966 17 0.890576 457 19 0.778048 135 9 0.885284 70 7 0.775331 131 13 0.957897 87 7 0.555169 65 5 0.805732 346 14 0.705404 254 11 0.316138 31 1 0.739292 234 11 0.866359 303 13 0.824621 508 14 0.830805 375 12 0.4294709 366 15 0.5971054 509 19 0.53613195 562 11 0.1652538 117 3 0.400102 155 11 0.2013979 636 14 0.770606 309 13 0.806064 401 17 0.720130 55 5 0.703085 250 9 0.815312 184 17 0.6239296 0.5116284 0.464393 0.757659 0.3335432 0.717268 0.252116 0.6977632 0.6680159 0.7435374 0.7661218 0.1829060 0.6222540 0.722538 0.3880763 0.1561027 0.357798 0.2874018 0.6531646 0.779168 0.722579 0.5548092 0.636436 0.865376 0.4497837 0.7373265 0.741746 0.361725 0.6540407 0.6964413 0.7401427 0.831703 0.0552381 0.1153968 0.1071936 0.08072208 0.117126 0.00838292 0.4186188 0.5732074 0.5353741 0.332026 0.423562 1 0.751177 0.785742 -0.07270874 11 0.791417 0.799164 -0.00774786 0.9995276 2.3521e-03 weaklyHypometh 1.00000 0.307143 insignificant 0.9955412 0.00408126 weaklyHypometh 1 0.81625 insignificant -0.0575403 0.3815441 insignificant 1 insignificant 0.758542 0.320256 3.7640e-01 18 0.783568 0.5003743 0.2831939 5.4821e-30 9.9999e-01 hypermethylated 2.2842e-28 1.0000e+00 hypermethylated 6.6899e-10 1.0000e+00 hypermethylated 2.9087e-08 1.0000e+00 hypermethylated 0.3075559 4.9456e-03 weaklyHypermeth 9.5107e-02 weaklyHypermeth 0.758681 0.757298 0.0177462 13 0.784437 0.796141 -0.01170405 4.6933e-01 5.3774e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 8.7573e-01 2.5963e-02 inconclusive 1.0000e+00 1.0000e+00 insignificant -0.06723989 1.7029e-01 insignificant 1.0000e+00 insignificant 0.785742 0.312284 0.50874070 11 0.799164 0.5286563 0.2705081 1.1609e-35 1.0000e+00 hypermethylated 1.4511e-33 1.0000e+00 hypermethylated 3.4388e-14 1.0000e+00 hypermethylated 2.8657e-12 1.0000e+00 hypermethylated 0.36509622 1.8154e-03 weaklyHypermeth 4.3223e-02 weaklyHypermeth 0.786052 0.746556 0.19271899 5 0.841226 0.792589 0.0486372 1.1598e-04 5.3556e-01 weaklyHypermeth 3.5145e-03 1.0000e+00 weaklyHypermeth 5.4674e-02 2.8802e-01 insignificant 9.9963e-01 1.0000e+00 insignificant -0.00969959 8.6022e-01 insignificant 1.000000 insignificant 0.320239 0.757298 -0.3042019 12 0.5254305 0.796141 -0.27071041 9.9999e-01 1.4311e-15 hypomethylated 1.0000e+00 1.1926e-13 hypomethylated 1.0000e+00 1.6899e-10 hypomethylated 1.0000e+00 1.6899e-08 hypomethylated -0.3747958 2.4338e-03 weaklyHypometh 7.8509e-02 weaklyHypometh chr17 77790950 77791950 51437 SLC16A3 ENSG00000141526 0.95705 716 21 0.876665 318 21 0.888296 337 21 0.938885 668 21 0.944217 231 15 0.932498 1055 21 0.8650614 291 17 0.912396 257 15 0.888069 243 16 0.966118 276 17 0.896926 591 21 0.9404040 119 16 0.971524 320 19 0.973146 91 6 0.957497 311 20 0.9583333 90 8 0.849259 92 10 0.912467 744 20 0.956685 520 20 0.956910 656 21 0.917820 258 21 0.932824 182 17 0.943202 456 21 0.866838 209 16 0.925498 253 17 0.948778 410 21 0.823687 285 15 0.941111 129 10 0.927812 291 16 0.935738 358 18 0.960487 522 21 0.928495 895 21 0.8689284 303 18 0.8070799 383 20 0.94736842 490 19 0.8487729 268 15 0.792183 249 16 0.8484359 411 17 0.956116 563 20 0.956821 919 20 0.960595 499 20 0.875336 737 19 0.949504 562 21 0.9336722 0.8631921 0.884260 0.935443 0.9444153 0.936455 0.880980 0.8930732 0.9062916 0.9670489 0.8947586 0.9461153 0.9634765 0.931434 0.9251487 0.9295897 0.895004 0.8738266 0.9439548 0.948521 0.946766 0.9104771 0.949107 0.866143 0.8931762 0.9391033 0.867416 0.868062 0.9002211 0.9293564 0.9548422 0.939214 0.7923310 0.7654322 0.9203992 0.72426108 0.784910 0.72513927 0.9431779 0.9354654 0.9374332 0.885399 0.931141 8 0.918107 0.922534 -0.00381268 21 0.886321 0.885835 0.00048613 0.6797414 3.7980e-01 insignificant 1.00000 1.000000 insignificant 0.5790232 0.63646764 insignificant 1 1.00000 insignificant 0.0060964 0.6663400 insignificant 1 insignificant 0.918107 0.773657 1.5506e-01 21 0.886321 0.8078205 0.0785010 2.7629e-11 6.3112e-01 weaklyHypermeth 4.9338e-10 1.0000e+00 weaklyHypermeth 6.7122e-03 6.4871e-01 weaklyHypermeth 8.3903e-02 1.0000e+00 weaklyHypermeth 0.0749925 1.8116e-02 weaklyHypermeth 2.8306e-01 insignificant 0.918107 0.936871 -0.0105907 20 0.886321 0.952235 -0.06591381 9.9885e-01 1.0985e-02 weaklyHypometh 1.0000e+00 6.8044e-01 insignificant 9.8094e-01 2.2254e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01255360 5.1654e-01 insignificant 1.0000e+00 insignificant 0.922534 0.773657 0.15860263 21 0.885835 0.8078205 0.0780149 3.0028e-07 5.2984e-01 weaklyHypermeth 5.2681e-06 1.0000e+00 weaklyHypermeth 8.7782e-03 6.0297e-01 weaklyHypermeth 1.0705e-01 1.0000e+00 insignificant 0.06889607 2.6047e-02 weaklyHypermeth 3.5199e-01 insignificant 0.922534 0.936871 -0.00524091 20 0.885835 0.952235 -0.0663999 9.9745e-01 1.1348e-02 weaklyHypometh 1.0000e+00 7.5651e-01 insignificant 9.5965e-01 3.0520e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01864998 3.6922e-01 insignificant 1.000000 insignificant 0.773764 0.936585 -0.1565386 20 0.8161761 0.910834 -0.09465764 9.9863e-01 1.0659e-03 weaklyHypometh 1.0000e+00 1.4805e-02 weaklyHypometh 9.1508e-01 7.1734e-02 insignificant 1.0000e+00 6.3482e-01 insignificant -0.0875460 1.1924e-02 weaklyHypometh 2.4841e-01 insignificant chr17 77791650 77792650 51438 SLC16A3 ENSG00000141526 0.93298 547 17 0.786523 610 18 0.782680 599 17 0.947994 371 18 0.862912 422 17 0.929422 1043 18 0.8351822 560 18 0.850116 559 17 0.902185 369 16 0.904093 438 16 0.886572 780 18 0.8159701 286 15 0.957934 486 14 0.852019 120 6 0.885025 422 16 0.8016501 251 13 0.803501 324 11 0.822636 432 12 0.923260 1069 17 0.954689 529 18 0.898437 353 18 0.789343 78 5 0.907648 427 17 0.871085 240 16 0.953990 245 7 0.927394 620 18 0.822500 389 16 0.859118 176 12 0.880383 640 17 0.930004 719 17 0.937357 1024 18 0.925735 764 18 0.5267609 608 18 0.6737945 690 17 0.67883064 581 17 0.2373367 220 10 0.491901 314 16 0.3835916 741 18 0.933569 391 17 0.888508 498 16 0.923532 333 13 0.859363 365 12 0.776131 411 18 0.9103682 0.8344753 0.799995 0.927461 0.8952473 0.929203 0.857869 0.8801222 0.9070463 0.9017642 0.8867002 0.8800035 0.9537768 0.776708 0.8952311 0.7900460 0.838586 0.8325865 0.9150774 0.942031 0.971711 0.8591054 0.916844 0.877450 0.8986845 0.9117406 0.854490 0.767424 0.8752410 0.9295129 0.9351423 0.926873 0.4839702 0.6764397 0.7637801 0.37210852 0.580983 0.32091101 0.9003343 0.8473628 0.8675461 0.831215 0.862641 8 0.877069 0.912216 -0.03320306 17 0.811322 0.853353 -0.04203124 0.9999999 3.5255e-03 weaklyHypometh 1.00000 0.391719 insignificant 0.9999364 0.10110931 insignificant 1 1.00000 insignificant -0.0200488 0.3101523 insignificant 1 insignificant 0.877243 0.517285 3.6488e-01 17 0.863988 0.4524213 0.4115671 5.5020e-56 1.0000e+00 hypermethylated 6.8775e-54 1.0000e+00 hypermethylated 2.2554e-19 1.0000e+00 hypermethylated 2.8193e-17 1.0000e+00 hypermethylated 0.3731649 2.6719e-03 weaklyHypermeth 6.2375e-02 weaklyHypermeth 0.877181 0.864797 0.0210328 16 0.812351 0.827512 -0.01516042 4.4207e-01 4.4911e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.4005e-01 3.4408e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00435326 8.9351e-01 insignificant 1.0000e+00 insignificant 0.912346 0.517460 0.39453219 18 0.880023 0.4716995 0.4083235 2.5951e-46 1.0000e+00 hypermethylated 5.1902e-44 1.0000e+00 hypermethylated 3.6528e-18 1.0000e+00 hypermethylated 4.0587e-16 1.0000e+00 hypermethylated 0.39321370 2.0418e-03 weaklyHypermeth 4.5924e-02 weaklyHypermeth 0.912346 0.865664 0.04502935 16 0.880023 0.866917 0.0131057 3.7005e-03 9.8551e-01 weaklyHypermeth 8.0445e-02 1.0000e+00 weaklyHypermeth 3.3048e-01 9.1861e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01569554 6.3749e-01 insignificant 1.000000 insignificant 0.517778 0.865529 -0.3307874 16 0.5202845 0.843596 -0.32331195 1.0000e+00 1.6741e-17 hypomethylated 1.0000e+00 1.6741e-15 hypomethylated 1.0000e+00 3.6833e-12 hypomethylated 1.0000e+00 6.1388e-10 hypomethylated -0.3775182 1.8474e-03 weaklyHypometh 6.5978e-02 weaklyHypometh chr17 77792550 77793550 51439 SLC16A3 ENSG00000141526 0.91641 424 12 0.854190 263 12 0.755237 312 12 0.952890 472 12 0.933154 180 12 0.936595 940 12 0.9430092 202 12 0.929282 299 12 0.929517 247 10 0.931076 385 10 0.901127 365 12 0.7190093 156 10 0.888529 363 10 0.923336 271 10 0.927477 362 10 0.9053554 140 5 0.908333 29 3 0.780192 599 12 0.936407 582 12 0.950664 447 12 0.792109 126 12 0.821006 161 10 0.952079 214 12 0.856137 190 12 0.873329 213 10 0.945518 426 12 0.917324 296 12 0.801916 236 12 0.941897 423 12 0.939334 426 12 0.842101 597 12 0.886586 483 12 0.2151665 318 12 0.2837788 336 12 0.30556561 234 6 0.0307692 164 8 0.285158 324 12 0.1354318 588 12 0.888899 379 12 0.873394 400 12 0.880974 366 10 0.724469 381 12 0.799435 360 12 0.9259251 0.8548443 0.781460 0.958761 0.9342678 0.931462 0.950157 0.9310489 0.9066560 0.9098623 0.8884369 0.7929049 0.9358624 0.927089 0.9125896 0.8883895 0.850036 0.8304198 0.9214785 0.935400 0.807148 0.8486875 0.962355 0.884235 0.9085531 0.9411856 0.907499 0.840903 0.9230969 0.9462085 0.9206094 0.923244 0.1813205 0.2382021 0.3375641 0.04299070 0.268546 0.12747346 0.8791906 0.8710159 0.8942846 0.779863 0.798212 8 0.904633 0.909475 -0.00706751 12 0.864679 0.892201 -0.02752193 0.7967087 5.5482e-01 insignificant 1.00000 1.000000 insignificant 0.4935537 0.81260437 insignificant 1 1.00000 insignificant 0.0153117 0.5036055 insignificant 1 insignificant 0.904884 0.164460 7.3687e-01 12 0.905849 0.2006520 0.7051970 1.3558e-127 1.0000e+00 hypermethylated 1.3558e-124 1.0000e+00 hypermethylated 2.3104e-28 1.0000e+00 hypermethylated 4.6209e-26 1.0000e+00 hypermethylated 0.6867780 4.4924e-06 hypermethylated 2.3644e-04 hypermethylated 0.904850 0.830329 0.0636995 12 0.883585 0.788517 0.09506834 2.5505e-05 9.9998e-01 weaklyHypermeth 8.2274e-04 1.0000e+00 weaklyHypermeth 7.0936e-04 9.9999e-01 weaklyHypermeth 2.3645e-02 1.0000e+00 weaklyHypermeth 0.06265535 1.2384e-01 insignificant 1.0000e+00 insignificant 0.909860 0.164460 0.74376664 12 0.906918 0.2006520 0.7062661 1.0108e-86 1.0000e+00 hypermethylated 3.3692e-84 1.0000e+00 hypermethylated 1.0952e-24 1.0000e+00 hypermethylated 3.6507e-22 1.0000e+00 hypermethylated 0.67146627 3.6942e-06 hypermethylated 2.8417e-04 hypermethylated 0.909451 0.830329 0.07120576 12 0.884501 0.788517 0.0959847 4.0214e-05 9.9970e-01 weaklyHypermeth 1.3867e-03 1.0000e+00 weaklyHypermeth 3.0732e-03 9.9879e-01 weaklyHypermeth 1.1160e-01 1.0000e+00 insignificant 0.04734363 2.3142e-01 insignificant 1.000000 insignificant 0.164460 0.830679 -0.6575453 12 0.2006520 0.836603 -0.63595060 1.0000e+00 1.8589e-41 hypomethylated 1.0000e+00 4.6472e-39 hypomethylated 1.0000e+00 7.9212e-16 hypomethylated 1.0000e+00 3.9606e-13 hypomethylated -0.6241226 1.5549e-06 hypomethylated 3.8873e-04 hypomethylated chr17 77833450 77834450 51442 CSNK1D ENSG00000141551 0.94515 278 7 0.614189 120 6 0.873626 93 6 0.906540 116 5 0.953031 147 6 0.921140 548 7 0.8698990 142 6 0.893390 127 6 0.891071 97 6 0.931173 113 6 0.870378 189 6 0.8764917 112 6 0.946614 167 6 0.880000 84 5 0.935265 223 6 0.9458874 39 3 0.952137 44 3 0.887437 114 7 0.942073 432 7 0.913180 371 7 0.977891 90 6 1.000000 8 0 0.881278 251 6 0.892918 99 7 1.000000 4 0 0.914508 175 7 0.941090 125 6 0.949678 144 6 0.741188 236 5 0.964616 200 7 0.943498 241 7 0.926736 414 7 0.9444444 121 5 0.8205300 246 7 0.99613900 157 7 0.8666667 28 3 0.929745 146 7 0.9742332 254 7 0.905825 237 7 0.930768 241 7 0.959184 83 6 0.893852 247 7 0.989011 66 7 0.9536350 0.7063044 0.880898 0.919188 0.9478312 0.930081 0.926018 0.8805241 0.9404691 0.9361378 0.9009112 0.8903028 0.9289156 0.935315 0.9201753 0.9134018 0.951313 0.9323646 0.9314849 0.935966 0.955945 0.9747338 0.939220 0.916285 0.9653124 0.8967148 0.954965 0.952455 0.8645426 0.9563481 0.9384537 0.916486 0.9597472 0.8137095 0.9998382 0.93896009 0.934616 0.97634056 0.9159285 0.9440190 0.9683490 0.938801 0.966836 1 0.917276 0.926522 -0.00891211 7 0.922242 0.811358 0.11088353 0.9875526 2.6036e-01 insignificant 1.00000 1.000000 insignificant 0.9931793 0.13630228 insignificant 1 1.00000 insignificant -0.0303497 0.2536657 insignificant 1 insignificant 0.917230 0.928571 -1.0513e-02 7 0.911133 0.9213681 -0.0102348 4.1681e-01 5.4454e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9016e-01 1.5855e-03 weaklyHypometh 1.0000e+00 1.4414e-01 insignificant -0.0245261 4.5925e-01 insignificant 1.0000e+00 insignificant 0.917230 0.929062 -0.0149184 7 0.911133 0.921638 -0.01050482 6.6074e-01 1.8477e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7118e-01 3.8246e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.03829432 1.3458e-01 insignificant 1.0000e+00 insignificant 0.926989 0.928571 0.00074409 7 0.927266 0.9213681 0.0058983 4.4564e-01 3.4344e-02 inconclusive 1.0000e+00 1.0000e+00 insignificant 9.5184e-01 3.3159e-02 inconclusive 1.0000e+00 1.0000e+00 insignificant 0.00582363 8.6656e-01 insignificant 1.0000e+00 insignificant 0.926989 0.929062 -0.00641498 7 0.927266 0.921638 0.0056283 2.9482e-01 1.2151e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.2366e-01 2.0792e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00794460 7.7005e-01 insignificant 1.000000 insignificant 0.928571 0.929062 -0.0026673 7 0.9213681 0.921638 -0.00027005 2.4594e-01 7.5046e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.2200e-01 9.0695e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0137682 6.8058e-01 insignificant 1.0000e+00 insignificant chr17 77848550 77849550 51443 CSNK1D ENSG00000141551 0.79011 331 15 0.694774 239 11 0.459842 322 17 0.686021 353 15 0.661012 150 13 0.715798 653 16 0.7224868 97 10 0.692909 401 15 0.743657 188 17 0.850024 249 15 0.697839 425 18 0.5496810 78 5 0.612608 404 15 0.787996 316 15 0.641626 270 15 0.7598214 95 6 0.500000 16 0 0.556960 383 14 0.757433 733 15 0.739417 337 15 0.488525 194 14 0.496405 226 16 0.653586 226 14 0.690397 254 18 0.540882 226 15 0.685513 404 15 0.521282 438 17 0.423760 88 9 0.668399 283 15 0.758619 467 18 0.646825 539 18 0.725321 410 15 0.1143750 430 15 0.1248299 328 14 0.12677802 442 15 0.0000000 71 4 0.175231 339 18 0.0014225 512 15 0.592908 244 11 0.606055 335 14 0.534621 223 12 0.621287 282 14 0.585327 223 13 0.7590779 0.5959825 0.473094 0.794380 0.6806109 0.795114 0.782874 0.7287366 0.7300129 0.8567934 0.7307175 0.6866946 0.6666983 0.700554 0.6624824 0.7238062 0.798721 0.5552276 0.8465970 0.771061 0.691599 0.5531386 0.693013 0.804050 0.6331505 0.6402966 0.723732 0.482943 0.7047765 0.7159384 0.6987404 0.783539 0.0611434 0.0745109 0.0649390 0.05100705 0.075179 0.00076821 0.6753337 0.6816727 0.6014307 0.745562 0.601542 5 0.749793 0.721364 0.02518642 15 0.622955 0.494449 0.12850673 0.2932888 9.9103e-01 insignificant 1.00000 1.000000 insignificant 0.0078536 0.99995020 weaklyHypermeth 1 1.00000 insignificant 0.0727077 0.0732035 insignificant 1 insignificant 0.749710 0.108860 6.6903e-01 15 0.593952 0.1092385 0.4847134 1.6329e-114 1.0000e+00 hypermethylated 8.1643e-112 1.0000e+00 hypermethylated 5.0738e-29 1.0000e+00 hypermethylated 1.2684e-26 1.0000e+00 hypermethylated 0.5905612 3.5426e-09 hypermethylated 3.9362e-07 hypermethylated 0.750000 0.721073 0.0444875 12 0.633761 0.529890 0.10387110 1.9211e-04 9.2096e-01 weaklyHypermeth 5.1920e-03 1.0000e+00 weaklyHypermeth 8.2216e-04 9.6146e-01 weaklyHypermeth 2.6521e-02 1.0000e+00 weaklyHypermeth 0.09296082 2.4835e-03 weaklyHypermeth 1.7180e-01 insignificant 0.722133 0.108491 0.63167199 15 0.553783 0.0936081 0.4601744 2.5515e-88 1.0000e+00 hypermethylated 1.2757e-85 1.0000e+00 hypermethylated 1.0434e-23 1.0000e+00 hypermethylated 2.6086e-21 1.0000e+00 hypermethylated 0.51785355 7.3677e-09 hypermethylated 1.4735e-06 hypermethylated 0.724036 0.720735 0.02669989 12 0.601938 0.528591 0.0733468 2.2300e-02 9.5211e-01 weaklyHypermeth 3.7167e-01 1.0000e+00 insignificant 1.5532e-01 9.0866e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02025315 5.6689e-01 insignificant 1.000000 insignificant 0.108953 0.721626 -0.5839058 12 0.1114382 0.555123 -0.44368502 1.0000e+00 6.1675e-52 hypomethylated 1.0000e+00 3.0837e-49 hypomethylated 1.0000e+00 3.6597e-15 hypomethylated 1.0000e+00 1.2199e-12 hypomethylated -0.4976004 1.0417e-06 hypomethylated 3.4724e-04 hypomethylated chr17 77860350 77861350 51444 CSNK1D ENSG00000141551 0.76400 342 11 0.725911 320 11 0.692220 216 11 0.783763 428 11 0.787879 141 8 0.682617 546 11 0.7669756 191 11 0.692694 217 10 0.787743 195 8 0.829970 140 9 0.767915 276 11 0.6505404 109 8 0.799054 218 11 0.786915 45 4 0.811466 176 11 0.5863636 58 5 0.908459 144 6 0.869662 440 8 0.663550 126 10 0.804966 313 11 0.645022 80 6 0.834261 149 7 0.687190 258 11 0.619712 108 7 0.748430 149 10 0.841350 285 11 0.801369 121 10 0.796620 101 5 0.794059 194 8 0.721369 340 10 0.773222 404 11 0.755362 384 11 0.6852607 253 11 0.5149411 188 11 0.68293323 142 8 0.8833333 67 7 0.638898 187 11 0.6767439 287 11 0.681779 386 11 0.822733 410 11 0.724209 369 11 0.818002 327 8 0.831903 343 11 0.8415078 0.8392067 0.756570 0.880961 0.8604501 0.843604 0.850537 0.8461256 0.8853516 0.8895045 0.8320972 0.8104222 0.8291235 0.864484 0.8786745 0.7906417 0.887634 0.8860173 0.7631118 0.899692 0.708200 0.8177831 0.840283 0.749085 0.8728761 0.8963100 0.803815 0.860346 0.8295566 0.8757715 0.8383312 0.867157 0.7604739 0.5133797 0.7269726 0.88670062 0.747857 0.85366619 0.8318764 0.8745385 0.8252287 0.850528 0.835770 5 0.832795 0.838710 -0.00013165 11 0.718541 0.659668 0.05887293 0.4884319 4.8494e-01 insignificant 1.00000 1.000000 insignificant 0.5309372 0.72013970 insignificant 1 1.00000 insignificant 0.0066357 0.8073565 insignificant 1 insignificant 0.832723 0.718611 9.2912e-02 11 0.698437 0.6114238 0.0870131 1.6602e-06 9.9117e-01 weaklyHypermeth 2.4061e-05 1.0000e+00 weaklyHypermeth 2.5446e-02 8.2265e-01 weaklyHypermeth 2.5446e-01 1.0000e+00 insignificant 0.0777812 1.7873e-01 insignificant 1.0000e+00 insignificant 0.832938 0.838147 0.0045922 11 0.726522 0.736253 -0.00973122 6.3437e-01 7.7202e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.5692e-01 6.1913e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01759227 6.3242e-01 insignificant 1.0000e+00 insignificant 0.838911 0.718611 0.09224111 11 0.659168 0.6114238 0.0477445 1.2347e-03 9.9877e-01 weaklyHypermeth 1.2347e-02 1.0000e+00 weaklyHypermeth 3.2761e-01 8.6347e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.07114549 2.1895e-01 insignificant 1.0000e+00 insignificant 0.839237 0.838147 0.00800321 11 0.709873 0.736253 -0.0263795 7.8334e-01 8.6298e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6646e-01 7.9618e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02422799 5.2883e-01 insignificant 1.000000 insignificant 0.718750 0.837882 -0.0892041 11 0.6299944 0.714274 -0.08427966 9.9953e-01 9.3991e-04 weaklyHypometh 1.0000e+00 1.3427e-02 weaklyHypometh 9.5464e-01 7.6892e-02 insignificant 1.0000e+00 6.5163e-01 insignificant -0.0953735 1.3349e-01 insignificant 1.0000e+00 insignificant chr17 77874950 77875950 51445 ENSG00000214084 0.79033 311 10 0.776202 219 10 0.684642 400 10 0.756594 174 9 0.801017 166 10 0.801827 475 10 0.7601873 235 10 0.757330 305 10 0.758153 275 10 0.803600 285 10 0.834966 403 10 0.7311073 219 10 0.726570 334 10 0.756449 126 6 0.753148 267 10 0.6853525 209 9 0.709124 284 6 0.738335 279 9 0.732661 538 10 0.758185 308 10 0.890985 164 10 0.587660 143 8 0.805984 262 10 0.740563 143 10 0.816173 139 9 0.790497 340 10 0.818986 309 10 0.795811 157 10 0.748824 285 10 0.806163 278 10 0.775964 362 10 0.850492 369 10 0.6270577 239 10 0.5288515 214 9 0.50000000 150 9 0.7160948 94 9 0.673667 187 10 0.5917805 269 10 0.646348 284 9 0.746122 304 9 0.646359 191 9 0.598024 284 9 0.735289 230 9 0.7935204 0.7488270 0.663596 0.747357 0.7988786 0.821578 0.766889 0.7484773 0.7439220 0.8107773 0.8269818 0.7106191 0.7112313 0.762182 0.7453841 0.7620147 0.709261 0.7212253 0.7885067 0.775295 0.893720 0.6077300 0.799479 0.814707 0.7924788 0.7883845 0.814807 0.875114 0.7370118 0.8039016 0.7298031 0.841724 0.5766402 0.5270599 0.4806056 0.70362397 0.703103 0.59871470 0.6054513 0.6981627 0.6313629 0.615201 0.731327 9 0.769191 0.798035 -0.02502856 10 0.757887 0.782124 -0.02423666 0.9860897 1.2732e-02 weaklyHypometh 1.00000 0.848799 insignificant 0.9971382 0.00283178 weaklyHypometh 1 0.81625 insignificant -0.0298861 0.2175113 insignificant 1 insignificant 0.769191 0.632493 1.4089e-01 10 0.757887 0.5501604 0.2077270 7.1178e-19 1.5312e-01 weaklyHypermeth 2.0336e-17 1.0000e+00 weaklyHypermeth 1.0807e-05 2.4825e-01 weaklyHypermeth 2.4560e-04 1.0000e+00 weaklyHypermeth 0.1495472 5.9764e-03 weaklyHypermeth 1.1082e-01 insignificant 0.769270 0.650425 0.1124512 9 0.778063 0.727334 0.05072976 1.0302e-08 9.8801e-01 weaklyHypermeth 6.0602e-07 1.0000e+00 weaklyHypermeth 9.1776e-05 9.7477e-01 weaklyHypermeth 5.0987e-03 1.0000e+00 weaklyHypermeth 0.08136070 4.3405e-02 weaklyHypermeth 8.5230e-01 insignificant 0.798035 0.632493 0.16766257 10 0.782124 0.5501604 0.2319636 2.1874e-13 8.0330e-01 weaklyHypermeth 5.4685e-12 1.0000e+00 weaklyHypermeth 7.6116e-07 6.0050e-01 weaklyHypermeth 2.3786e-05 1.0000e+00 weaklyHypermeth 0.17943321 1.4978e-03 weaklyHypermeth 3.8405e-02 weaklyHypermeth 0.798035 0.650155 0.13426405 9 0.782124 0.702546 0.0795782 3.3352e-07 9.9988e-01 weaklyHypermeth 2.3823e-05 1.0000e+00 weaklyHypermeth 3.5607e-06 9.9630e-01 weaklyHypermeth 2.5433e-04 1.0000e+00 weaklyHypermeth 0.11124675 1.2737e-02 weaklyHypermeth 0.519094 insignificant 0.632493 0.650155 -0.0293293 9 0.5501604 0.702546 -0.15238544 1.6629e-01 3.3315e-03 weaklyHypometh 1.0000e+00 4.0628e-02 weaklyHypometh 2.8433e-01 2.1992e-02 weaklyHypometh 1.0000e+00 2.7838e-01 insignificant -0.0681865 1.5841e-01 insignificant 1.0000e+00 insignificant chr17 78080350 78081350 51451 FOXK2 ENSG00000141568 0.71363 139 5 0.707295 132 5 0.558158 96 5 0.697549 107 5 0.767619 66 5 0.679692 237 5 0.7000000 98 5 0.699917 78 5 0.681333 97 5 0.713939 95 5 0.691064 141 5 0.6238095 64 5 0.674632 94 5 NA 0 0 0.693480 103 5 0.6340803 66 5 0.657974 81 5 0.684980 112 5 0.662500 113 5 0.652382 220 5 0.696667 19 1 0.596078 42 2 0.695717 95 5 0.676923 64 5 0.733333 33 5 0.738342 138 5 0.583217 54 5 0.490000 22 2 0.738105 124 5 0.782406 123 5 0.707110 113 5 0.669049 261 5 0.6345650 123 5 0.6077632 93 5 0.66025641 62 5 0.6400000 35 5 0.645000 32 5 0.6735388 127 5 0.726586 118 5 0.590491 133 5 0.700327 93 5 0.675960 153 5 0.650400 118 5 0.7031353 0.7003717 0.578957 0.701508 0.7677249 0.688013 0.701389 0.6844191 0.6631944 0.7097854 0.6929967 0.6203704 0.6592292 NA 0.6826275 0.6294513 0.670695 0.6836161 0.6584201 0.655783 0.685764 0.6224129 0.685751 0.672543 0.7430556 0.7365634 0.569712 0.500000 0.7419575 0.7665988 0.7085903 0.672561 0.6205393 0.6134518 0.6784633 0.66111111 0.663194 0.68435307 0.7323655 0.5823392 0.7207698 0.683646 0.657736 2 0.687705 0.713235 -0.02354986 5 0.682093 0.704967 -0.02287390 0.8520199 1.4420e-01 insignificant 1.00000 1.000000 insignificant 0.5230985 0.17245714 insignificant 1 1.00000 insignificant 0.0030546 0.9067775 lowCoverage 1 lowCoverage 0.687705 0.656780 3.6269e-02 5 0.682093 0.6474857 0.0346072 7.0761e-03 4.8466e-01 weaklyHypermeth 5.9463e-02 1.0000e+00 weaklyHypermeth 3.3763e-02 5.3308e-01 weaklyHypermeth 3.2155e-01 1.0000e+00 insignificant 0.0351130 1.9131e-02 lowCoverage 2.9432e-01 lowCoverage 0.687705 0.663415 0.0157324 5 0.682093 0.669043 0.01305010 3.7158e-01 4.2078e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.4446e-01 4.5146e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00988088 7.1100e-01 lowCoverage 1.0000e+00 lowCoverage 0.713235 0.656780 0.06039373 5 0.704967 0.6474857 0.0574811 1.2816e-02 8.1112e-01 weaklyHypermeth 9.9348e-02 1.0000e+00 weaklyHypermeth 2.9951e-02 6.8980e-01 weaklyHypermeth 2.9364e-01 1.0000e+00 insignificant 0.03205837 2.2729e-01 lowCoverage 1.0000e+00 lowCoverage 0.713235 0.663415 0.03416018 5 0.704967 0.669043 0.0359240 1.8330e-01 7.6932e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.7395e-01 7.9658e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00682625 8.4053e-01 lowCoverage 1.000000 lowCoverage 0.656780 0.663415 -0.0256982 5 0.6474857 0.669043 -0.02155709 4.0530e-01 1.7395e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.7219e-01 1.7030e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0252321 3.5809e-01 insignificant 1.0000e+00 insignificant chr17 78287950 78288950 51454 FN3K ENSG00000167363 0.65391 259 10 0.721129 212 11 0.764215 159 11 0.823786 207 9 0.818918 103 7 0.858115 391 11 0.7173744 150 9 0.822598 219 11 0.821994 165 11 0.811239 168 10 0.780359 422 11 0.5600289 57 7 0.840726 262 11 0.865079 92 8 0.766965 135 9 0.5409091 39 2 0.680556 27 0 0.836354 220 11 0.783233 467 11 0.872888 274 11 0.813998 147 8 0.752695 126 9 0.844506 175 9 0.845961 164 10 0.696491 95 6 0.838673 271 11 0.794579 276 11 0.679076 75 5 0.890850 225 10 0.794484 308 11 0.741061 438 11 0.858871 323 11 0.7669774 208 11 0.7340318 234 10 0.64479561 161 11 0.7523810 45 2 0.776537 192 12 0.7615079 330 11 0.788865 187 9 0.864201 265 11 0.888731 152 9 0.669346 137 6 0.816404 192 11 0.7929367 0.7714776 0.770027 0.861897 0.7890944 0.863026 0.732747 0.8415695 0.8147557 0.8968434 0.8175857 0.5887475 0.8446610 0.870081 0.7972644 0.6088915 0.626667 0.8489072 0.8445113 0.868825 0.869240 0.7747653 0.857893 0.872661 0.7617100 0.8314883 0.843937 0.786384 0.8437648 0.8103630 0.8077206 0.864035 0.7840172 0.6153695 0.4185475 0.76656523 0.768887 0.80364235 0.7820525 0.8231457 0.8603857 0.793405 0.817950 4 0.822493 0.829584 -0.00592319 10 0.784703 0.732426 0.05227608 0.5857531 4.9359e-01 insignificant 1.00000 1.000000 insignificant 0.8455182 0.33138120 insignificant 1 1.00000 insignificant -0.0289184 0.3211418 insignificant 1 insignificant 0.822493 0.753846 7.3409e-02 10 0.784703 0.7243866 0.0603159 2.1545e-03 5.5619e-01 weaklyHypermeth 2.0136e-02 1.0000e+00 weaklyHypermeth 7.0265e-02 5.7146e-01 insignificant 5.9046e-01 1.0000e+00 insignificant 0.0276471 3.5522e-01 insignificant 1.0000e+00 insignificant 0.822493 0.809218 0.0080955 10 0.784703 0.825799 -0.04109616 3.2616e-01 1.7109e-02 inconclusive 1.0000e+00 8.5334e-01 insignificant 8.6355e-01 1.2300e-02 inconclusive 1.0000e+00 8.2002e-01 insignificant -0.03849041 4.0994e-01 insignificant 1.0000e+00 insignificant 0.829584 0.753846 0.08009535 11 0.732426 0.7243866 0.0080398 3.7111e-02 8.0451e-01 weaklyHypermeth 2.6320e-01 1.0000e+00 insignificant 2.2143e-01 9.4532e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.05656546 6.0165e-02 insignificant 6.2672e-01 insignificant 0.829584 0.809218 0.01111189 10 0.732426 0.825799 -0.0933722 5.0275e-01 1.3974e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.8685e-01 1.7940e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00957201 8.3033e-01 insignificant 1.000000 insignificant 0.753846 0.809218 -0.0608337 10 0.7243866 0.825799 -0.10141207 9.7077e-01 5.6150e-03 weaklyHypometh 1.0000e+00 6.2388e-02 weaklyHypometh 9.8416e-01 9.3526e-03 weaklyHypometh 1.0000e+00 1.5085e-01 insignificant -0.0661375 1.7518e-01 insignificant 1.0000e+00 insignificant chr17 78410250 78411250 51455 ZNF750 ENSG00000141579 0.77653 690 20 0.768438 536 21 0.789830 362 20 0.799397 580 20 0.733268 276 20 0.832850 1124 20 0.8086862 234 17 0.769974 407 20 0.752092 303 19 0.845402 306 20 0.780707 790 21 0.7868859 127 11 0.788605 484 21 0.752679 124 8 0.721133 330 20 0.6031820 99 7 0.633715 114 10 0.752321 622 21 0.809360 512 19 0.881951 662 18 0.902195 321 18 0.608828 244 15 0.774650 607 19 0.843944 238 19 0.863824 158 13 0.807112 609 21 0.752949 320 19 0.874312 154 12 0.817139 483 20 0.822896 595 21 0.830463 815 20 0.835139 978 17 0.8312015 525 19 0.7973937 316 17 0.66835187 747 18 0.8222367 134 11 0.751671 268 19 0.8393323 521 18 0.503613 451 18 0.575893 513 17 0.673484 464 18 0.540949 451 19 0.733063 636 21 0.8082144 0.8042033 0.771602 0.809511 0.7250371 0.873196 0.796945 0.7487412 0.7567855 0.8421619 0.7662790 0.7402606 0.7723404 0.756360 0.7031703 0.5580023 0.675215 0.7446381 0.7720129 0.878572 0.921131 0.5596783 0.766993 0.817935 0.8378450 0.8029602 0.754519 0.900191 0.8086650 0.8173762 0.8131257 0.849999 0.8373948 0.8265458 0.7309767 0.81714186 0.779614 0.82295905 0.4604093 0.5540342 0.6559569 0.505030 0.724134 7 0.798088 0.818363 -0.01162549 21 0.792955 0.806698 -0.01374266 0.9673063 1.6140e-01 insignificant 1.00000 1.000000 insignificant 0.9999693 0.00061596 weaklyHypometh 1 0.49333 insignificant -0.0417708 0.1253205 insignificant 1 insignificant 0.798088 0.813620 -2.1435e-03 19 0.792955 0.8009669 -0.0080116 5.8820e-01 2.2917e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.8400e-01 1.0963e-03 weaklyHypometh 1.0000e+00 1.0963e-01 insignificant -0.0156811 6.1847e-01 insignificant 1.0000e+00 insignificant 0.798088 0.597217 0.1873650 19 0.792955 0.616962 0.17599330 1.8852e-34 1.0000e+00 weaklyHypermeth 1.8852e-31 1.0000e+00 weaklyHypermeth 3.2734e-17 1.0000e+00 weaklyHypermeth 1.0911e-14 1.0000e+00 weaklyHypermeth 0.16394960 1.5094e-02 weaklyHypermeth 4.3125e-01 insignificant 0.818363 0.813620 0.01001091 19 0.806698 0.8009669 0.0057311 3.5813e-01 2.2955e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.3146e-01 1.4498e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02608975 4.6424e-01 insignificant 1.0000e+00 insignificant 0.818363 0.597217 0.19480214 19 0.806698 0.616962 0.1897360 3.1443e-26 1.0000e+00 weaklyHypermeth 3.1443e-23 1.0000e+00 weaklyHypermeth 1.3526e-18 1.0000e+00 weaklyHypermeth 1.3526e-15 1.0000e+00 weaklyHypermeth 0.20572045 4.7065e-03 weaklyHypermeth 0.372730 insignificant 0.813620 0.597217 0.1876964 19 0.8009669 0.616962 0.18400490 3.8688e-17 1.0000e+00 weaklyHypermeth 1.9344e-14 1.0000e+00 weaklyHypermeth 2.3364e-12 1.0000e+00 weaklyHypermeth 2.3364e-09 1.0000e+00 weaklyHypermeth 0.1796307 9.2778e-03 weaklyHypermeth 2.1781e-01 insignificant chr17 78413550 78414550 51456 ZNF750 ENSG00000141579 0.93535 279 8 0.894228 130 8 0.790056 137 8 0.846474 89 8 0.979688 65 8 0.928458 362 8 0.9535714 66 7 0.906944 68 7 0.927083 98 8 0.950319 82 8 0.909246 276 8 0.5775253 41 3 0.920990 171 8 NA 0 0 0.933988 110 8 0.6145833 19 2 0.788996 38 3 0.827746 98 8 0.957910 159 8 0.932947 297 8 1.000000 72 8 0.472173 72 8 0.970878 168 8 0.862263 48 4 0.930556 28 3 0.948961 122 8 0.891544 85 7 0.880952 54 7 0.835689 85 8 0.911672 134 8 0.874008 195 8 0.950696 392 8 0.9227140 96 8 0.9861111 150 8 0.91164659 168 3 0.9504630 94 8 0.973684 75 8 0.9391107 117 8 0.793028 165 8 0.520571 235 8 0.792992 91 7 0.555354 159 8 0.811119 141 8 0.9225068 0.8504578 0.736833 0.883888 0.9645390 0.903836 0.941236 0.8543341 0.8990436 0.9494790 0.9026119 0.7495809 0.9066656 NA 0.9311891 0.6935277 0.840441 0.8728294 0.9752219 0.939279 1.000000 0.6415147 0.958767 0.894584 0.8747045 0.9355626 0.864570 0.795584 0.8465538 0.9256639 0.9066757 0.929318 0.9561762 0.9960599 0.8988136 0.88494878 0.928331 0.95000364 0.7438943 0.5406455 0.7414141 0.572614 0.861094 2 0.909478 0.903780 0.00432253 8 0.909153 0.904833 0.00431993 0.6210057 6.2977e-01 insignificant 1.00000 1.000000 insignificant 0.9109890 0.42438977 insignificant 1 1.00000 insignificant -0.0050226 0.9159048 insignificant 1 insignificant 0.909478 0.927143 -2.1699e-02 8 0.909153 0.9460981 -0.0369452 7.1635e-01 2.2673e-03 weaklyHypometh 1.0000e+00 2.2673e-01 insignificant 9.9770e-01 3.1469e-04 weaklyHypometh 1.0000e+00 4.4956e-02 weaklyHypometh -0.0748615 1.4179e-02 weaklyHypometh 2.3632e-01 insignificant 0.909478 0.667509 0.2451903 8 0.909153 0.667852 0.24130064 3.3968e-23 1.0000e+00 hypermethylated 6.7937e-21 1.0000e+00 hypermethylated 1.8205e-08 1.0000e+00 hypermethylated 1.5171e-06 1.0000e+00 hypermethylated 0.17781386 4.7055e-02 weaklyHypermeth 8.7139e-01 insignificant 0.903780 0.927143 -0.02319971 8 0.904833 0.9460981 -0.0412651 9.2641e-01 2.7130e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9923e-01 6.6683e-03 weaklyHypometh 1.0000e+00 7.4092e-01 insignificant -0.06983889 1.1336e-01 insignificant 1.0000e+00 insignificant 0.903780 0.667509 0.24286534 8 0.904833 0.667852 0.2369807 1.0370e-13 1.0000e+00 hypermethylated 1.4815e-11 1.0000e+00 hypermethylated 1.1615e-07 1.0000e+00 hypermethylated 1.9359e-05 1.0000e+00 hypermethylated 0.18283643 4.4777e-02 weaklyHypermeth 0.932848 insignificant 0.927143 0.667509 0.2722520 8 0.9460981 0.667852 0.27824579 3.1061e-12 1.0000e+00 hypermethylated 1.0354e-09 1.0000e+00 hypermethylated 8.0022e-09 1.0000e+00 hypermethylated 4.0011e-06 1.0000e+00 hypermethylated 0.2526753 1.5955e-02 weaklyHypermeth 2.9547e-01 insignificant chr17 78619450 78620450 51460 B3GNTL1 ENSG00000175711 0.87318 920 43 0.879547 4521 64 0.847360 3475 80 0.862034 522 38 0.796905 145 7 0.881001 2283 65 0.6753450 144 7 0.972700 142 7 0.839773 62 7 0.967971 134 7 0.625647 153 7 0.6759019 84 4 0.752146 71 7 0.912556 115 7 0.960714 105 7 0.9423913 89 4 0.333333 3 0 0.894272 986 43 0.975464 319 7 0.919184 715 47 1.000000 73 7 0.898292 154 7 0.892671 1971 67 0.981481 42 6 0.726390 392 7 0.930599 4269 65 0.788131 65 7 0.880000 37 6 0.841658 183 7 0.931098 1682 79 0.882724 3146 65 0.913203 1440 52 0.7408147 1482 69 0.5963901 204 7 0.79400373 4872 65 0.8940345 140 7 0.496723 70 7 0.8011953 1606 61 0.860891 791 42 0.894776 2577 64 0.809740 528 43 0.907809 884 39 0.915507 628 37 0.9231145 0.8643238 0.868856 0.923541 0.8825611 0.902636 0.859684 0.9714869 0.9534784 0.9545320 0.8901744 0.8649769 0.7938422 0.894971 0.9631455 0.9175780 0.659854 0.9369088 0.9724908 0.896425 1.000000 0.9023606 0.881287 0.976526 0.9425398 0.9572588 0.947994 0.976526 0.9661497 0.9688191 0.9204051 0.917271 0.8510620 0.7312824 0.8313683 0.88869112 0.738752 0.89155811 0.9482448 0.9312247 0.9497962 0.878924 0.957793 6 0.904781 0.924730 -0.02080463 57 0.855575 0.895439 -0.03986463 0.9999226 5.4513e-05 weaklyHypometh 1.00000 0.054513 weaklyHypometh 0.9984617 0.26717333 insignificant 1 1.00000 insignificant -0.0594829 0.1594911 insignificant 1 insignificant 0.904546 0.808051 9.5688e-02 57 0.851952 0.7528149 0.0991367 1.2147e-32 1.0000e+00 weaklyHypermeth 5.2814e-31 1.0000e+00 weaklyHypermeth 2.2446e-12 1.0000e+00 weaklyHypermeth 1.3204e-10 1.0000e+00 weaklyHypermeth 0.1088442 1.5224e-01 insignificant 1.0000e+00 insignificant 0.904682 0.936009 -0.0292368 49 0.860374 0.857731 0.00264217 9.9865e-01 5.5616e-09 weaklyHypometh 1.0000e+00 2.7808e-06 weaklyHypometh 1.0000e+00 6.8154e-03 weaklyHypometh 1.0000e+00 7.5727e-01 insignificant -0.04837359 2.3758e-01 insignificant 1.0000e+00 insignificant 0.924622 0.808244 0.11602192 63 0.888796 0.7610876 0.1277083 1.8085e-35 1.0000e+00 weaklyHypermeth 2.0094e-33 1.0000e+00 weaklyHypermeth 1.8113e-18 1.0000e+00 weaklyHypermeth 2.2641e-16 1.0000e+00 weaklyHypermeth 0.16832701 3.6630e-02 weaklyHypermeth 4.4670e-01 insignificant 0.924795 0.936367 -0.01088876 50 0.900914 0.869095 0.0318188 9.9434e-01 1.8050e-03 weaklyHypometh 1.0000e+00 2.2563e-01 insignificant 1.0000e+00 6.0643e-03 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 0.01110926 7.1116e-01 insignificant 1.000000 insignificant 0.808124 0.936021 -0.1284019 50 0.7669547 0.859330 -0.09237527 1.0000e+00 5.2456e-32 weaklyHypometh 1.0000e+00 8.7427e-30 weaklyHypometh 1.0000e+00 5.8910e-12 weaklyHypometh 1.0000e+00 8.4157e-10 weaklyHypometh -0.1572177 4.6784e-02 weaklyHypometh 5.7157e-01 insignificant chr18 753950 754950 51464 ENOSF1 ENSG00000132199 0.88440 133 6 0.788357 180 6 0.738796 75 6 0.839282 112 6 0.876754 76 5 0.855482 186 6 0.8622896 99 6 0.898422 120 6 0.833530 77 6 0.866459 91 6 0.870034 202 6 0.8106061 62 6 0.821818 117 6 0.731981 49 6 0.894815 67 6 0.9076438 56 5 0.890944 456 6 0.835659 103 6 0.855575 79 6 0.806044 166 6 0.680556 29 3 0.944444 39 3 0.819097 97 6 0.715233 66 6 0.750463 40 6 0.828402 148 6 0.767063 58 5 0.972222 40 3 0.790239 107 6 0.865246 137 6 0.712009 121 6 0.849865 183 6 0.7154757 121 6 0.6086957 62 6 0.85825334 91 5 0.6000000 15 2 0.878220 101 6 0.8466811 99 6 0.819875 146 6 0.844500 157 6 0.856508 133 6 0.851732 84 6 0.889544 149 6 0.8844263 0.7959198 0.745985 0.848009 0.8394737 0.839490 0.864040 0.8989635 0.8078829 0.8714560 0.8307477 0.8091631 0.8228297 0.809004 0.9005926 0.8935583 0.898993 0.8445336 0.8582945 0.821408 0.686111 0.9518519 0.825813 0.798004 0.7493210 0.7740377 0.772778 0.972222 0.8903062 0.8249579 0.7837784 0.853555 0.7212433 0.6235105 0.8765359 0.62444444 0.845034 0.85982043 0.8362644 0.8591308 0.8611932 0.858874 0.896223 6 0.846768 0.842254 0.01402070 6 0.872501 0.796754 0.07574691 0.0524738 9.7572e-01 insignificant 1.00000 1.000000 insignificant 0.3407371 0.94391777 insignificant 1 1.00000 insignificant 0.0355411 0.2302068 insignificant 1 insignificant 0.846645 0.791411 5.2502e-02 6 0.856564 0.8418796 0.0146844 8.5377e-03 6.5255e-01 weaklyHypermeth 6.9412e-02 1.0000e+00 weaklyHypermeth 1.8215e-01 6.1206e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0922235 1.3842e-01 insignificant 1.0000e+00 insignificant 0.846493 0.893871 -0.0254634 6 0.842085 0.853602 -0.01151668 5.7971e-01 2.8508e-03 weaklyHypometh 1.0000e+00 2.3757e-01 insignificant 8.3112e-01 8.3155e-03 weaklyHypometh 1.0000e+00 8.2002e-01 insignificant -0.00898737 5.7765e-01 insignificant 1.0000e+00 insignificant 0.842105 0.791411 0.02913495 6 0.771349 0.8418796 -0.0705308 1.9888e-01 4.7353e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.7244e-01 5.1542e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.05668242 3.6019e-01 insignificant 1.0000e+00 insignificant 0.844255 0.893871 -0.03865635 6 0.822909 0.853602 -0.0306926 5.3153e-01 3.0871e-03 weaklyHypometh 1.0000e+00 3.4301e-01 insignificant 8.3441e-01 5.4909e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04452846 1.4021e-01 insignificant 1.000000 insignificant 0.790554 0.893871 -0.0654831 6 0.7891728 0.853602 -0.06442927 8.8311e-01 9.7043e-03 weaklyHypometh 1.0000e+00 9.7043e-02 weaklyHypometh 6.2256e-01 3.0540e-02 weaklyHypometh 1.0000e+00 3.5511e-01 insignificant -0.1012109 1.1064e-01 insignificant 1.0000e+00 insignificant chr18 2986550 2987550 51490 EMILIN2 ENSG00000132205 0.60625 177 5 0.644461 111 5 0.454046 97 5 0.683039 135 5 0.585065 68 4 0.624896 64 5 0.4845276 83 5 0.756823 160 5 0.410481 89 3 0.534632 80 3 0.650718 174 5 0.5789474 42 2 0.799154 94 5 0.663889 30 3 0.607917 91 5 0.2500000 14 1 0.559211 45 2 0.622280 153 3 0.739003 104 5 0.623684 52 3 0.739610 53 6 0.517143 29 3 0.609994 100 5 0.521886 39 3 0.627446 53 3 0.672265 152 5 0.403333 27 1 0.575572 50 3 0.533333 141 3 0.698894 180 5 0.546280 194 5 0.661111 69 5 0.5007326 97 3 0.5245455 81 5 0.49120879 50 5 0.5641026 27 2 0.551510 106 4 0.5657151 167 5 0.602295 158 5 0.687088 145 5 0.533965 126 5 0.473239 86 3 0.490110 131 3 0.6027686 0.6909559 0.521301 0.675770 0.6574248 0.668079 0.568307 0.7572491 0.6657222 0.7464969 0.6723339 0.5356903 0.7220855 0.658169 0.6470669 0.4605263 0.575867 0.6520303 0.6681238 0.640582 0.692857 0.5733083 0.673789 0.637427 0.5680763 0.6595917 0.354715 0.565682 0.6252990 0.6690019 0.6197131 0.674342 0.5398231 0.4085526 0.5674161 0.64100058 0.560852 0.55595630 0.6420945 0.6386689 0.5795309 0.604208 0.590467 2 0.662373 0.639374 0.01304826 5 0.648333 0.639101 0.00923173 0.2513425 5.1351e-01 insignificant 1.00000 1.000000 insignificant 0.1577841 0.80593808 insignificant 1 1.00000 insignificant 0.0017122 0.9654013 lowCoverage 1 lowCoverage 0.662373 0.539773 1.2249e-01 5 0.648333 0.5330470 0.1152856 9.5983e-06 9.9626e-01 weaklyHypermeth 1.2629e-04 1.0000e+00 weaklyHypermeth 3.0322e-03 9.9526e-01 weaklyHypermeth 4.2114e-02 1.0000e+00 weaklyHypermeth 0.0609821 6.1207e-02 lowCoverage 6.3597e-01 lowCoverage 0.662373 0.628483 0.0406542 5 0.648333 0.639400 0.00893303 7.4090e-02 8.1600e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.9288e-02 9.0038e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03661168 4.6916e-01 lowCoverage 1.0000e+00 lowCoverage 0.639374 0.539773 0.11008987 5 0.639101 0.5330470 0.1060539 1.8230e-04 9.9934e-01 weaklyHypermeth 2.2506e-03 1.0000e+00 weaklyHypermeth 2.9418e-02 9.9878e-01 weaklyHypermeth 2.9127e-01 1.0000e+00 insignificant 0.05926981 6.9175e-02 lowCoverage 6.8491e-01 lowCoverage 0.639374 0.628483 0.01885293 5 0.639101 0.639400 -0.0002987 8.9702e-02 4.0324e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.2891e-01 4.3952e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03489943 4.8659e-01 lowCoverage 1.000000 lowCoverage 0.539773 0.628483 -0.0851063 5 0.5330470 0.639400 -0.10635261 9.3887e-01 4.1482e-03 weaklyHypometh 1.0000e+00 4.8802e-02 weaklyHypometh 8.9690e-01 2.0802e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0243704 5.8327e-01 lowCoverage 1.0000e+00 lowCoverage chr18 3028450 3029450 51493 LPIN2 ENSG00000101577 0.86517 181 7 0.709384 88 6 0.644527 61 6 0.866745 107 7 0.837037 46 6 0.699527 244 6 0.7138605 78 6 0.748196 84 6 0.608264 67 6 0.899711 63 6 0.872998 116 6 0.8376684 84 6 0.677852 63 4 NA 0 0 0.879690 98 6 0.8560606 53 4 0.621645 58 6 0.892284 131 7 0.891340 144 6 0.762358 205 6 0.964286 19 0 0.830782 78 6 0.876965 125 7 0.534286 29 4 0.928571 30 4 0.883317 145 6 0.650576 47 5 0.817013 55 5 0.633333 74 4 0.872648 170 6 0.839310 136 6 0.786747 232 7 0.7011689 71 6 0.8357035 102 6 0.71064815 89 6 0.8256738 94 6 0.676190 57 4 0.8359788 123 6 0.859222 201 7 0.934601 162 7 0.905490 197 7 0.909466 192 7 0.899033 139 7 0.8315758 0.7863499 0.744669 0.829189 0.8250712 0.839067 0.625712 0.7422274 0.5795566 0.8894898 0.8137898 0.7821063 0.7915234 NA 0.8478466 0.8186092 0.769355 0.8646099 0.8920694 0.754834 0.947436 0.8082723 0.852660 0.529118 0.9062271 0.8628812 0.769949 0.804334 0.8065812 0.8438948 0.8205597 0.798687 0.7072495 0.8112945 0.6761396 0.80009447 0.555100 0.79136481 0.8301888 0.9036963 0.8696036 0.879689 0.855883 4 0.802638 0.821053 -0.01961121 6 0.810323 0.819717 -0.00939307 0.8204736 3.3693e-01 insignificant 1.00000 1.000000 insignificant 0.8971387 0.12254699 insignificant 1 1.00000 insignificant -0.0181010 0.6860550 insignificant 1 insignificant 0.802638 0.744403 5.7838e-02 6 0.810323 0.8017895 0.0085340 1.3207e-02 8.5272e-01 weaklyHypermeth 1.0005e-01 1.0000e+00 insignificant 1.5225e-01 7.6299e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0191578 6.2992e-01 insignificant 1.0000e+00 insignificant 0.802638 0.892256 -0.0707449 6 0.810323 0.900218 -0.08989499 9.9995e-01 6.7271e-04 weaklyHypometh 1.0000e+00 9.6102e-02 weaklyHypometh 1.0000e+00 6.4958e-05 weaklyHypometh 1.0000e+00 3.2479e-02 weaklyHypometh -0.11817743 1.8177e-04 weaklyHypometh 3.6196e-02 weaklyHypometh 0.821053 0.744403 0.07842927 6 0.819717 0.8017895 0.0179271 3.6830e-04 8.5641e-01 weaklyHypermeth 4.1852e-03 1.0000e+00 weaklyHypermeth 3.0332e-02 8.5607e-01 weaklyHypermeth 2.9449e-01 1.0000e+00 insignificant 0.03725884 4.5454e-01 insignificant 1.0000e+00 insignificant 0.821053 0.892256 -0.04863890 6 0.819717 0.900218 -0.0805019 9.9403e-01 7.2668e-04 weaklyHypometh 1.0000e+00 1.0381e-01 insignificant 9.7168e-01 4.9684e-03 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.10007643 2.4594e-02 weaklyHypometh 0.768549 insignificant 0.744403 0.892256 -0.1247122 6 0.8017895 0.900218 -0.09842899 9.9836e-01 1.4311e-04 weaklyHypometh 1.0000e+00 2.7520e-03 weaklyHypometh 9.9940e-01 1.6334e-03 weaklyHypometh 1.0000e+00 4.0835e-02 weaklyHypometh -0.1373353 5.1703e-03 weaklyHypometh 1.3257e-01 insignificant chr18 3647350 3648350 51516 ENSG00000177337 0.72580 332 11 0.600688 161 11 0.575304 122 8 0.707619 285 11 0.736961 79 10 0.751388 362 11 0.6263401 165 11 0.763748 138 9 0.652542 96 8 0.796547 127 10 0.732924 362 11 0.6795455 71 10 0.681724 164 11 0.796667 40 5 0.812088 151 11 0.7715278 66 8 0.637755 54 7 0.782993 202 11 0.709668 206 11 0.679716 308 11 0.856986 62 5 0.684546 107 8 0.620097 217 11 0.661416 60 8 0.787879 56 5 0.654455 239 11 0.708966 120 11 0.784921 48 4 0.673109 124 5 0.700562 213 11 0.691764 241 11 0.739088 511 11 0.6868900 168 11 0.5042373 161 11 0.75070902 156 11 0.7250567 75 7 0.615741 88 8 0.6714591 270 11 0.747332 307 11 0.773549 350 11 0.693766 313 11 0.748577 336 11 0.718450 388 11 0.7852969 0.6635608 0.629602 0.753056 0.7324809 0.803996 0.654266 0.8019713 0.6794001 0.8475806 0.7626218 0.7403086 0.7214512 0.774645 0.8450309 0.7604327 0.718433 0.7830738 0.7818315 0.785852 0.803744 0.7009688 0.785939 0.672309 0.7734568 0.7602010 0.717120 0.856173 0.7265691 0.7625339 0.7280503 0.742265 0.7374743 0.5768176 0.7472417 0.75768323 0.614321 0.67552578 0.7832094 0.7791670 0.7585773 0.807799 0.773002 5 0.732455 0.742356 0.00848015 11 0.773833 0.718714 0.05511963 0.5469308 7.7469e-01 insignificant 1.00000 1.000000 insignificant 0.8531251 0.80587739 insignificant 1 1.00000 insignificant -0.0025716 0.9180962 insignificant 1 insignificant 0.731840 0.681917 6.7012e-02 11 0.721641 0.6962464 0.0253947 3.4071e-03 9.9386e-01 weaklyHypermeth 2.9887e-02 1.0000e+00 weaklyHypermeth 1.0057e-01 9.9645e-01 insignificant 7.8567e-01 1.0000e+00 insignificant 0.0520620 2.2854e-01 insignificant 1.0000e+00 insignificant 0.732071 0.713695 -0.0223982 11 0.721641 0.764984 -0.04334293 9.9478e-01 1.5090e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9450e-01 2.7820e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02525739 2.3834e-01 insignificant 1.0000e+00 insignificant 0.742211 0.681917 0.05799078 11 0.679443 0.6962464 -0.0168038 2.0990e-02 9.5955e-01 weaklyHypermeth 1.5664e-01 1.0000e+00 insignificant 1.8383e-02 9.8975e-01 weaklyHypermeth 1.9767e-01 1.0000e+00 insignificant 0.05463361 2.2131e-01 insignificant 1.0000e+00 insignificant 0.742195 0.713695 -0.03079549 11 0.694827 0.764984 -0.0701568 9.7110e-01 1.6890e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.0345e-01 4.6800e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02268577 3.5644e-01 insignificant 1.000000 insignificant 0.680874 0.713357 -0.0879880 11 0.6709336 0.745399 -0.07446577 9.9981e-01 5.8681e-03 weaklyHypometh 1.0000e+00 6.3098e-02 weaklyHypometh 9.9979e-01 2.7760e-02 weaklyHypometh 1.0000e+00 3.3224e-01 insignificant -0.0773194 9.0680e-02 insignificant 8.7192e-01 insignificant chr18 8901650 8902650 51562 ENSG00000209617 0.76441 137 5 0.524042 130 4 0.643761 110 5 0.657734 83 4 0.762952 81 5 0.815669 178 5 0.7240238 143 5 0.508886 97 4 0.672049 113 5 0.770875 60 5 0.728410 160 5 0.7129670 77 5 0.610813 85 5 0.748106 42 4 0.588180 101 5 0.7774295 55 2 0.486413 63 2 0.648098 114 4 0.747923 121 5 0.840552 151 5 0.726007 64 4 0.850000 9 1 0.508608 94 5 0.489123 128 4 1.000000 1 0 0.804040 153 4 0.571780 72 5 0.646111 45 4 0.597754 126 5 0.653061 115 4 0.813611 149 4 0.788428 162 5 0.9075458 121 5 0.9171242 96 5 0.87338462 153 4 0.7500000 4 0 0.849961 102 4 0.7295138 181 5 0.718295 213 5 0.555917 163 5 0.482492 110 4 0.621943 160 5 0.820501 67 4 0.8006466 0.4813971 0.740234 0.750902 0.7670361 0.843767 0.829986 0.6721507 0.7302314 0.8559362 0.7502671 0.7235695 0.5263649 0.656626 0.5974048 0.7151659 0.651470 0.7100143 0.8730548 0.917666 0.757184 0.5862069 0.679783 0.665012 0.7593856 0.8067964 0.611198 0.853065 0.6844754 0.6977481 0.8194444 0.844303 0.9792693 0.9780820 0.6678382 0.80449845 0.916972 0.59721593 0.7664466 0.5457158 0.5592429 0.507389 0.899425 1 0.709662 0.728661 0.01550575 5 0.706795 0.687873 0.01892210 0.2717114 7.7748e-01 insignificant 1.00000 1.000000 insignificant 0.3779637 0.47197368 insignificant 1 1.00000 insignificant -0.0173788 0.7308830 lowCoverage 1 lowCoverage 0.709662 0.846271 -1.2126e-01 5 0.706795 0.8529170 -0.1461219 9.9977e-01 1.5012e-05 weaklyHypometh 1.0000e+00 2.1446e-03 weaklyHypometh 9.9997e-01 1.3268e-04 weaklyHypometh 1.0000e+00 2.5453e-02 weaklyHypometh -0.1512568 3.2590e-03 lowCoverage 7.3684e-02 lowCoverage 0.709662 0.637640 0.0793962 5 0.706795 0.635575 0.07122054 3.3571e-02 9.5578e-01 weaklyHypermeth 5.5035e-01 1.0000e+00 insignificant 1.7013e-01 9.6830e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.04683523 4.9413e-01 lowCoverage 1.0000e+00 lowCoverage 0.728661 0.846271 -0.11356456 5 0.687873 0.8529170 -0.1650440 9.9979e-01 2.9266e-05 weaklyHypometh 1.0000e+00 4.8777e-03 weaklyHypometh 9.9985e-01 9.5587e-04 weaklyHypometh 1.0000e+00 1.3655e-01 insignificant -0.13387803 2.6980e-02 lowCoverage 3.5973e-01 lowCoverage 0.725403 0.638149 0.04834667 5 0.573227 0.696312 -0.1230846 2.1052e-01 9.5444e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.7087e-01 7.6476e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.06421401 4.0981e-01 lowCoverage 1.000000 lowCoverage 0.846271 0.637640 0.1643889 5 0.8529170 0.635575 0.21734244 2.3875e-05 1.0000e+00 weaklyHypermeth 5.9688e-03 1.0000e+00 weaklyHypermeth 1.4242e-03 1.0000e+00 weaklyHypermeth 2.8484e-01 1.0000e+00 insignificant 0.1980920 2.5230e-02 lowCoverage 3.6566e-01 lowCoverage chr18 9690550 9691550 51583 ENSG00000212572 0.65873 42 5 0.738278 65 5 0.516667 19 0 0.710000 60 5 0.633684 50 3 0.685714 32 5 0.6436404 64 5 0.766667 30 3 0.556923 45 5 0.720000 22 4 0.833333 51 5 0.4166667 10 0 0.778846 30 2 0.703704 28 2 0.355556 24 2 0.3750000 7 0 0.733333 11 2 0.683333 24 3 0.900000 10 0 0.729231 43 3 0.833333 8 0 0.700000 13 0 0.653333 43 4 0.870000 18 1 0.880303 40 3 0.716667 45 5 0.700000 6 0 0.722222 10 1 0.713889 49 5 0.689394 37 3 0.650909 42 5 0.653333 26 5 0.6842105 68 5 1.0000000 17 3 0.85128205 47 5 0.8000000 26 3 0.759184 34 3 0.7416667 25 3 0.631242 64 5 0.561050 48 5 0.720513 57 5 0.925926 19 2 0.637949 61 5 0.7522848 0.6325341 0.570707 0.675069 0.6055821 0.686869 0.541667 0.7525253 0.6156843 0.7393939 0.7474747 0.3636364 0.6561772 0.764310 0.2849364 0.5105256 0.626803 0.6393939 0.8484848 0.692308 0.737374 0.7424242 0.621717 0.790909 0.9187328 0.6077441 0.530303 0.790321 0.6805556 0.6829660 0.5526171 0.618182 0.7224880 0.9748538 0.7905983 0.87878788 0.732468 0.66919192 0.5712107 0.5752211 0.6083916 0.820827 0.585651 0 0.681402 0.727003 -0.01626646 4 0.694725 0.713283 -0.01855750 0.4886210 2.9687e-01 lowCoverage 1.00000 1.000000 lowCoverage 0.3973601 0.10426619 lowCoverage 1 1.00000 lowCoverage -0.0749833 0.0730463 lowCoverage 1 lowCoverage 0.679160 0.813953 -1.0135e-01 5 0.669847 0.7478663 -0.0780195 9.5069e-01 4.0752e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.6780e-01 1.3717e-02 weaklyHypometh 1.0000e+00 9.1444e-01 insignificant -0.1490918 2.1631e-02 lowCoverage 3.0466e-01 lowCoverage 0.679160 0.653226 0.0377236 5 0.669847 0.709492 -0.03964550 2.4301e-01 5.5805e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.0825e-01 7.8936e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03837054 6.0678e-01 lowCoverage 1.0000e+00 lowCoverage 0.727003 0.816901 -0.08936266 4 0.713283 0.7974396 -0.0841568 9.9111e-01 2.1853e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.9723e-01 5.5486e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.07410850 1.8435e-01 lowCoverage 1.0000e+00 lowCoverage 0.727003 0.651822 0.06666159 4 0.713283 0.651391 0.0618920 7.9213e-02 8.5780e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 5.5481e-02 9.6917e-01 lowCoverage 9.9963e-01 1.0000e+00 lowCoverage 0.03661278 6.0896e-01 lowCoverage 1.000000 lowCoverage 0.811060 0.654618 0.1522200 5 0.7124569 0.750993 -0.03853658 4.8372e-02 9.8665e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 1.6251e-02 9.9717e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.1107213 1.9260e-01 lowCoverage 1.0000e+00 lowCoverage chr18 11248550 11249550 51652 ENSG00000168738 0.81329 483 19 0.763360 402 19 0.721720 241 19 0.797518 371 17 0.823319 183 19 0.741152 715 19 0.6418771 215 19 0.788158 336 19 0.613872 187 17 0.771474 164 18 0.729361 484 19 0.6369845 135 12 0.774431 313 19 0.824074 44 6 0.732136 261 19 0.7780486 123 8 0.604299 98 8 0.832696 309 19 0.780471 396 19 0.766759 576 19 0.796851 179 15 0.814187 137 16 0.777096 403 19 0.778263 160 11 0.854894 97 13 0.763782 518 19 0.746449 287 13 0.684570 84 9 0.752040 279 18 0.755355 463 19 0.767451 496 19 0.769402 681 19 0.7870310 317 18 0.7315129 418 18 0.72545751 282 17 0.6427360 140 11 0.658409 268 15 0.7866812 571 19 0.808998 445 19 0.813045 505 19 0.811982 327 18 0.798156 403 19 0.783371 449 19 0.8009467 0.7676012 0.722711 0.843212 0.8140115 0.782282 0.721455 0.8034397 0.7022739 0.7533089 0.7894949 0.6891845 0.7889869 0.797052 0.7540673 0.7790904 0.687863 0.8034287 0.8290908 0.790014 0.798286 0.8429066 0.791734 0.823382 0.8867041 0.8010945 0.777927 0.765139 0.8004835 0.8160302 0.8278921 0.782787 0.7724069 0.7252896 0.7713462 0.71988392 0.651949 0.79782438 0.8112402 0.7901809 0.8034098 0.802496 0.814099 6 0.786282 0.825846 -0.02367582 19 0.750862 0.754460 -0.00359888 0.9819283 1.0562e-02 weaklyHypometh 1.00000 0.812485 insignificant 0.9934743 0.00775364 weaklyHypometh 1 1.00000 insignificant -0.0249453 0.2148377 insignificant 1 insignificant 0.786141 0.786072 1.6275e-02 19 0.739537 0.7588513 -0.0193142 2.5137e-01 9.1823e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.6639e-01 9.8589e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0247786 4.2342e-01 insignificant 1.0000e+00 insignificant 0.786282 0.790042 -0.0287461 19 0.750862 0.812595 -0.06173333 9.8278e-01 2.8767e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.5685e-01 2.6475e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.05636062 2.7024e-03 weaklyHypometh 1.7180e-01 insignificant 0.825707 0.786072 0.04075066 19 0.743300 0.7588513 -0.0155518 1.4362e-03 9.8463e-01 weaklyHypermeth 1.3943e-02 1.0000e+00 weaklyHypermeth 3.5582e-03 9.9964e-01 weaklyHypermeth 4.8084e-02 1.0000e+00 weaklyHypermeth 0.04972391 1.1398e-01 insignificant 1.0000e+00 insignificant 0.825846 0.790042 -0.00075017 19 0.754460 0.812595 -0.0581345 3.2546e-01 2.6282e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.8534e-01 6.7272e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03141530 3.0081e-02 weaklyHypometh 0.859456 insignificant 0.786072 0.789845 -0.0439300 19 0.7588513 0.804077 -0.04522516 9.9655e-01 9.6400e-03 weaklyHypometh 1.0000e+00 9.7043e-02 weaklyHypometh 9.9964e-01 2.3149e-02 weaklyHypometh 1.0000e+00 2.8937e-01 insignificant -0.0811392 2.2057e-02 weaklyHypometh 3.5946e-01 insignificant chr18 12292750 12293750 51690 CIDEA ENSG00000176194 0.64474 81 5 0.717615 99 5 0.550325 66 5 0.693571 50 5 0.698521 47 5 0.635281 90 5 0.7268773 68 5 0.780093 41 5 0.674790 68 5 0.784722 57 4 0.744272 131 5 0.7142857 30 4 0.751374 44 4 0.841575 54 4 0.623095 34 5 0.7777778 40 4 0.568516 595 4 0.774074 51 5 0.756566 42 4 0.777565 64 5 0.680000 24 4 0.900000 11 0 0.718788 43 5 0.482804 41 3 0.841342 48 5 0.779469 97 5 0.734343 48 5 0.800000 27 2 0.738095 32 4 0.699921 83 5 0.707500 75 5 0.744153 86 5 0.6441520 83 5 0.5791209 60 5 0.63374126 70 4 0.5833333 12 0 0.509091 46 3 0.6769231 66 5 0.650000 73 5 0.844935 90 5 0.723333 98 5 0.647619 61 4 0.691234 56 5 0.5833333 0.6904253 0.607164 0.646516 0.5876890 0.581213 0.605544 0.6797587 0.7123915 0.6905738 0.6937649 0.5889930 0.6962146 0.767527 0.5846019 0.7285974 0.721172 0.6765027 0.8053072 0.751595 0.624863 0.8729508 0.661823 0.382188 0.8123802 0.7417835 0.682481 0.750000 0.6135831 0.6338819 0.6569233 0.702786 0.5665804 0.5261755 0.6374507 0.58323575 0.408718 0.61223203 0.5860656 0.8338354 0.6772541 0.587978 0.631174 4 0.700742 0.733333 -0.00914052 5 0.751323 0.721174 0.03014825 0.1439903 7.5656e-02 insignificant 1.00000 1.000000 insignificant 0.4673431 0.10916154 insignificant 1 1.00000 insignificant -0.0237529 0.4930110 lowCoverage 1 lowCoverage 0.699943 0.623145 9.6786e-02 5 0.726587 0.6387767 0.0878104 1.1262e-04 9.1135e-01 weaklyHypermeth 1.3096e-03 1.0000e+00 weaklyHypermeth 7.8995e-03 9.2739e-01 weaklyHypermeth 9.7524e-02 1.0000e+00 weaklyHypermeth 0.1073881 4.4893e-03 lowCoverage 8.9195e-02 lowCoverage 0.699943 0.740741 0.0138363 5 0.726587 0.705042 0.02154494 1.9468e-01 4.9845e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.4404e-01 3.5187e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00035742 9.9317e-01 lowCoverage 1.0000e+00 lowCoverage 0.733660 0.623145 0.09754510 5 0.732076 0.6387767 0.0932992 8.9747e-03 9.8387e-01 weaklyHypermeth 7.1227e-02 1.0000e+00 weaklyHypermeth 5.2149e-02 9.6826e-01 insignificant 4.3823e-01 1.0000e+00 insignificant 0.13114100 3.5769e-03 lowCoverage 7.2997e-02 lowCoverage 0.733660 0.740741 0.03720509 5 0.732076 0.705042 0.0270337 4.9158e-02 2.5560e-01 weaklyHypermeth 6.8275e-01 1.0000e+00 insignificant 2.4720e-01 3.0047e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02411034 6.1679e-01 lowCoverage 1.000000 lowCoverage 0.623145 0.740741 -0.0770840 5 0.6387767 0.705042 -0.06626547 8.3484e-01 5.4970e-03 weaklyHypometh 1.0000e+00 6.1764e-02 weaklyHypometh 8.6019e-01 4.2833e-02 weaklyHypometh 1.0000e+00 4.4518e-01 insignificant -0.1070307 4.2818e-02 lowCoverage 5.3523e-01 lowCoverage chr18 13152950 13153950 51706 ENSG00000215526 0.81482 493 8 0.796176 264 8 0.742751 166 8 0.861623 470 8 0.811164 68 7 0.794763 434 8 0.7149725 117 8 0.769798 221 8 0.828034 174 8 0.765593 155 6 0.831351 234 8 0.9047619 48 4 0.875656 218 6 0.823895 103 6 0.777134 199 6 0.9166667 9 0 0.697917 33 4 0.779515 539 8 0.846390 180 8 0.846861 387 8 0.876042 44 4 0.608408 120 4 0.858637 227 8 0.808529 117 6 0.724900 120 6 0.837507 272 8 0.800703 128 8 0.809895 103 4 0.805878 259 8 0.884505 327 8 0.823193 274 8 0.805965 381 8 0.7694979 196 8 0.7830413 141 8 0.71960784 60 4 0.6878501 60 6 0.795779 144 8 0.7405716 289 8 0.821470 482 8 0.820871 424 8 0.778105 466 8 0.876431 363 8 0.816757 431 8 0.8547080 0.8287891 0.851122 0.899135 0.8218977 0.817158 0.825204 0.8050611 0.8250558 0.8494788 0.8687893 0.9117199 0.9013346 0.827145 0.9284800 0.9115667 0.675381 0.8380205 0.8613748 0.879679 0.895776 0.7874318 0.910543 0.855802 0.8302378 0.8675313 0.857422 0.794619 0.8914462 0.9009976 0.8734892 0.867213 0.7891055 0.8031977 0.8409402 0.76946330 0.795388 0.78367486 0.8697516 0.8745015 0.8218716 0.901170 0.866643 4 0.839096 0.869309 -0.01305318 8 0.813748 0.824582 -0.01083402 0.7743631 2.2850e-02 weaklyHypometh 1.00000 1.000000 insignificant 0.5536364 0.07593400 insignificant 1 1.00000 insignificant 0.0063118 0.8035928 insignificant 1 insignificant 0.839096 0.807865 3.8055e-02 8 0.813748 0.7787875 0.0349602 9.9761e-03 7.6936e-01 weaklyHypermeth 7.7938e-02 1.0000e+00 weaklyHypermeth 8.3534e-02 8.6007e-01 insignificant 6.7914e-01 1.0000e+00 insignificant 0.0606007 1.4682e-02 weaklyHypermeth 2.4068e-01 insignificant 0.839096 0.836565 -0.0091417 8 0.813748 0.821191 -0.00744336 5.4733e-01 1.5612e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.9791e-01 4.2932e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01273466 5.4412e-01 insignificant 1.0000e+00 insignificant 0.869309 0.807865 0.04992792 8 0.824582 0.7787875 0.0457942 5.7260e-04 5.7816e-01 weaklyHypermeth 6.1570e-03 1.0000e+00 weaklyHypermeth 1.3846e-02 6.7993e-01 weaklyHypermeth 1.5885e-01 1.0000e+00 insignificant 0.05428895 6.3881e-02 insignificant 6.5019e-01 insignificant 0.869309 0.836565 0.00431579 8 0.824582 0.821191 0.0033907 1.0310e-02 2.3694e-01 weaklyHypermeth 1.9453e-01 1.0000e+00 insignificant 1.1702e-01 3.1980e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01904642 4.8483e-01 insignificant 1.000000 insignificant 0.807865 0.836565 -0.0481613 8 0.7787875 0.821191 -0.04240352 8.1437e-01 6.9079e-02 insignificant 1.0000e+00 5.0793e-01 insignificant 8.8632e-01 1.1516e-01 insignificant 1.0000e+00 9.2126e-01 insignificant -0.0733354 1.0962e-02 weaklyHypometh 2.3322e-01 insignificant chr18 33153850 33154850 52027 C18orf10 ENSG00000134779 0.769876 526 12 0.705480 421 13 0.682264 357 12 0.7748627 453 11 0.6957582 247 15 0.762742 621 13 0.7188223 295 11 0.6917279 301 12 0.7213796 299 11 0.797422 222 12 0.749108 555 14 0.6934934 168 10 0.72897456 310 12 0.742571 88 8 0.8175325 295 11 0.6418651 131 11 0.6270346 436 9 0.6865073 401 11 0.7497500 327 12 0.741728 450 12 0.722218 165 9 0.648392 166 10 0.798345 458 12 0.6660015 165 10 0.798076 312 11 0.7928486 480 13 0.715940 236 12 0.694671 134 11 0.714928 301 12 0.712437 491 12 0.8004185 490 12 0.7150474 576 12 0.5829290 397 12 0.5456730 295 9 0.6202824 634 12 0.6701031 198 9 0.4975412 289 12 0.6853391 587 14 0.619599 577 12 0.8142612 456 11 0.7347916 434 12 0.6762426 466 12 0.7577119 445 11 0.788484 0.6945136 0.719901 0.7956626 0.770241 0.751204 0.7266029 0.7119679 0.729714 0.791621 0.7598185 0.731995 0.7769912 0.7650773 0.7769297 0.7341862 0.7218225 0.7159280 0.7635348 0.731428 0.746893 0.6471111 0.783908 0.6694791 0.8123916 0.7788862 0.734978 0.727379 0.767902 0.7834882 0.7588705 0.7762272 0.5949170 0.6300033 0.7704161 7.0002e-01 0.61094024 0.6490819 0.712766 0.7788665 0.707977 0.7502720 0.7355919 10 0.7485151 0.7931034 -0.01086529 12 0.697395 0.732411 -0.03501588 0.97867000 2.2548e-01 insignificant 1.00000 1.000000 insignificant 0.68886294 4.0916e-01 insignificant 1.00000 1.000000 insignificant -0.00666525 0.72662894 insignificant 1.00000 insignificant 0.7485151 0.6900000 0.09077336 12 0.697395 0.6059539 0.0914412 1.4838e-06 9.5056e-01 weaklyHypermeth 1.3248e-05 1.0000e+00 weaklyHypermeth 1.2703e-06 9.9177e-01 weaklyHypermeth 2.0164e-05 1.0000e+00 weaklyHypermeth 0.1246337 6.6288e-03 weaklyHypermeth 7.2612e-02 weaklyHypermeth 0.7502921 0.7270816 0.00815267 11 0.7294322 0.7124098 0.01702238 4.7480e-02 5.9756e-01 weaklyHypermeth 4.7010e-01 1.0000e+00 insignificant 1.8265e-01 5.8203e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0044237 9.0519e-01 insignificant 1.0000e+00 insignificant 0.7931034 0.6900000 0.1124732 12 0.732411 0.6059539 0.12645703 5.0515e-07 9.3463e-01 weaklyHypermeth 5.3739e-06 1.0000e+00 weaklyHypermeth 8.4110e-07 9.4678e-01 weaklyHypermeth 1.4756e-05 1.0000000 weaklyHypermeth 0.13129897 4.5667e-03 weaklyHypermeth 5.7083e-02 weaklyHypermeth 0.7954834 0.7270816 2.2060e-02 11 0.7684230 0.7124098 5.6013e-02 1.1460e-02 7.2091e-01 weaklyHypermeth 1.5079e-01 1.0000e+00 insignificant 3.1997e-02 4.7600e-01 weaklyHypermeth 4.5804e-01 1.0000e+00 insignificant 0.01108893 7.7439e-01 insignificant 1.0000e+00 insignificant 0.6914670 0.7270816 -7.6057e-02 11 0.6453986 0.7124098 -0.06701117 9.1884e-01 1.7275e-02 weaklyHypometh 1.0000e+00 1.1365e-01 insignificant 9.7968e-01 5.2150e-03 weaklyHypometh 1.0000000 5.9261e-02 weaklyHypometh -1.2021e-01 2.6195e-02 weaklyHypometh 2.5230e-01 insignificant chr18 33227950 33228950 52028 C18orf10 ENSG00000134779 0.300599 648 19 0.111995 420 20 0.245805 402 18 0.0741238 397 17 0.1085834 238 24 0.151520 695 20 0.1700069 324 17 0.1388351 326 15 0.0913020 317 15 0.097821 294 15 0.284321 429 19 0.2782407 231 15 0.04613173 446 15 0.022222 76 10 0.0516206 336 16 0.1370755 303 12 0.0797363 229 13 0.0881152 590 19 0.1455518 344 19 0.158588 699 19 0.213751 214 15 0.140417 380 15 0.077002 491 19 0.1035744 242 13 0.099189 450 15 0.1069399 565 19 0.262764 394 16 0.153056 147 13 0.142009 293 15 0.077057 544 19 0.0577147 547 19 0.2269364 689 19 0.0117444 346 17 0.0000000 323 17 0.0769231 108 6 0.0027526 305 17 0.0652832 226 16 0.0511628 457 19 0.066337 846 19 0.1265843 606 19 0.0817971 460 19 0.0547024 590 19 0.0894384 618 19 0.085980 0.0643801 0.111372 0.0706294 0.114758 0.168203 0.1213061 0.0938097 0.111883 0.141970 0.1925586 0.137984 0.0638658 0.0984396 0.0684502 0.0996221 0.0668781 0.0541669 0.1058185 0.088556 0.195654 0.0271989 0.106862 0.1032372 0.0713920 0.1001420 0.105057 0.145132 0.082744 0.0722635 0.0688318 0.1614764 0.0209557 0.0000000 0.0032282 5.9443e-03 0.02998670 0.0012920 0.019885 0.0272548 0.037553 0.0176627 0.0609365 13 0.1097766 0.1073446 0.00062047 19 0.190184 0.142377 0.04780633 0.94075607 5.8813e-01 insignificant 1.00000 1.000000 insignificant 0.79417055 9.1445e-01 insignificant 1.00000 1.000000 insignificant 0.00074217 0.97760128 insignificant 1.00000 insignificant 0.1089936 0.0152975 0.09886603 19 0.153250 0.0371984 0.1160517 2.5460e-13 1.0000e+00 weaklyHypermeth 3.4405e-12 1.0000e+00 weaklyHypermeth 6.8119e-12 1.0000e+00 weaklyHypermeth 1.7926e-10 1.0000e+00 weaklyHypermeth 0.1044654 1.6761e-04 weaklyHypermeth 3.3522e-03 weaklyHypermeth 0.1093871 0.0448718 0.07264252 19 0.1389831 0.0945528 0.04443026 1.0851e-07 9.9980e-01 weaklyHypermeth 5.4256e-06 1.0000e+00 weaklyHypermeth 1.7349e-06 1.0000e+00 weaklyHypermeth 1.2392e-04 1.00000000 weaklyHypermeth 0.0553379 2.0084e-02 weaklyHypermeth 3.1763e-01 insignificant 0.1073161 0.0153061 0.1016348 19 0.150225 0.0385762 0.11164881 3.3200e-11 1.0000e+00 weaklyHypermeth 4.7428e-10 1.0000e+00 weaklyHypermeth 4.1105e-09 1.0000e+00 weaklyHypermeth 1.0276e-07 1.0000000 weaklyHypermeth 0.10372319 4.2350e-04 weaklyHypermeth 6.8306e-03 weaklyHypermeth 0.1074965 0.0448718 7.1973e-02 19 0.1687435 0.0945528 7.4191e-02 7.1349e-06 1.0000e+00 weaklyHypermeth 2.3016e-04 1.0000e+00 weaklyHypermeth 6.5834e-04 1.0000e+00 weaklyHypermeth 1.9950e-02 1.0000e+00 weaklyHypermeth 0.05459576 2.8480e-02 weaklyHypermeth 6.7810e-01 insignificant 0.0153322 0.0449583 -2.8273e-02 19 0.0433982 0.1063719 -0.06297375 9.9994e-01 4.8627e-03 weaklyHypometh 1.0000e+00 3.7990e-02 weaklyHypometh 1.0000e+00 1.8140e-02 weaklyHypometh 1.0000000 1.5912e-01 insignificant -4.9127e-02 2.6239e-02 weaklyHypometh 2.5230e-01 insignificant chr18 33409450 33410450 52034 BRUNOL4 ENSG00000101489 0.832063 154 5 0.788484 155 6 0.715409 108 6 0.8175476 191 5 0.7948718 36 2 0.785886 152 6 0.7542017 92 6 0.8507265 152 6 0.7787941 79 6 0.889683 88 6 0.834142 177 6 0.8619929 42 2 0.84456488 181 6 NA 0 0 0.7295482 79 6 0.8472222 23 1 0.7435185 57 2 0.6191413 222 5 0.6759384 98 5 0.819111 186 6 0.937198 51 5 0.560000 42 5 0.775203 103 5 0.8789683 50 5 0.763241 91 5 0.8046464 227 6 0.882672 53 6 0.625000 20 1 0.943958 116 5 0.929576 214 6 0.8417895 222 6 0.8425432 202 6 0.6491866 145 6 0.7879282 103 5 0.5000000 14 1 0.6666667 10 0 0.7458781 57 5 0.8351987 276 6 0.531752 201 5 0.6370104 228 5 0.6276216 184 5 0.6372887 182 5 0.7389082 173 5 0.864634 0.7878969 0.619466 0.7889672 0.881279 0.795047 0.8015042 0.8401630 0.794219 0.937378 0.8981647 0.827499 0.8302551 NA 0.6976768 0.8047945 0.7007610 0.5519935 0.7918483 0.812521 0.939051 0.6547945 0.717100 0.9187867 0.8141358 0.7838798 0.890628 0.829611 0.928587 0.8942099 0.8662805 0.8427662 0.5185291 0.7629073 NA 3.0137e-01 0.77195463 0.8099469 0.489524 0.5310597 0.513740 0.5502614 0.8559178 1 0.7900528 0.8396837 -0.05055778 6 0.793394 0.841838 -0.04844384 0.99478041 2.2186e-02 weaklyHypometh 1.00000 0.730535 insignificant 0.84682291 7.1946e-02 insignificant 1.00000 1.000000 insignificant -0.02682880 0.49356635 lowCoverage 1.00000 lowCoverage 0.7900528 0.7371901 0.05297253 6 0.793394 0.7447574 0.0486363 4.4949e-02 5.1783e-01 weaklyHypermeth 2.1202e-01 1.0000e+00 insignificant 2.1499e-01 6.6835e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0910945 1.2608e-01 lowCoverage 7.6412e-01 lowCoverage 0.7900528 0.6270661 0.17092463 5 0.7933937 0.6770817 0.11631200 2.0890e-07 9.8029e-01 weaklyHypermeth 9.2775e-06 1.0000e+00 weaklyHypermeth 1.9528e-05 9.7571e-01 weaklyHypermeth 9.2991e-04 1.00000000 weaklyHypermeth 0.1540546 5.4935e-03 lowCoverage 1.5696e-01 lowCoverage 0.8396837 0.7371901 0.1015437 6 0.841838 0.7447574 0.09708013 6.8640e-03 8.9107e-01 weaklyHypermeth 4.3720e-02 1.0000e+00 weaklyHypermeth 6.6079e-02 7.8460e-01 insignificant 3.8643e-01 1.0000000 insignificant 0.11792328 7.7490e-02 lowCoverage 5.4795e-01 lowCoverage 0.8396837 0.6270661 2.1848e-01 5 0.8418375 0.6770817 1.6476e-01 7.1219e-11 9.9284e-01 hypermethylated 7.9133e-09 1.0000e+00 hypermethylated 3.9025e-05 9.9509e-01 hypermethylated 2.1680e-03 1.0000e+00 hypermethylated 0.18088341 2.4887e-03 weaklyHypermeth 1.5747e-01 insignificant 0.7371901 0.6270661 1.5469e-01 5 0.7447574 0.6770817 0.06767571 7.4305e-05 9.6435e-01 weaklyHypermeth 1.0615e-02 1.0000e+00 weaklyHypermeth 1.8700e-02 9.5587e-01 weaklyHypermeth 1.0000000 1.0000e+00 insignificant 6.2960e-02 3.1483e-01 lowCoverage 1.0000e+00 lowCoverage chr18 40896750 40897750 52129 SETBP1 ENSG00000152217 0.916191 241 10 0.749603 107 9 0.791345 140 5 0.9953488 170 5 0.9681254 92 5 0.691775 308 7 0.8571652 132 9 0.9600000 142 5 0.7757287 152 10 0.830403 160 9 0.916567 244 10 0.8906695 134 9 0.88888889 206 10 0.917778 94 5 0.8611039 340 9 0.6455981 147 9 0.8530952 50 5 0.9311765 192 5 0.9019356 217 9 0.838292 197 9 0.743056 61 5 0.954046 80 6 0.948700 142 9 0.7343434 75 6 0.941355 59 5 0.9696155 162 9 0.635964 195 7 0.807118 98 8 0.870722 160 7 0.846500 132 5 0.8681621 96 5 0.6508895 235 10 0.8761383 139 7 0.8265993 96 5 0.7777778 275 6 0.7986111 37 3 0.7655868 134 9 0.8723447 168 8 0.949130 280 10 0.9575753 184 10 0.9470870 222 10 0.8219847 227 9 0.9840804 203 10 0.951277 0.9510335 0.921494 0.9947935 0.925503 0.914471 0.9162032 0.9726368 0.924294 0.961183 0.9823731 0.926922 0.9688640 0.9098305 0.9584545 0.8672823 0.9815476 0.9654960 0.9758902 0.932618 0.985386 0.9561055 0.968823 0.9075079 0.9077825 0.9654026 0.872210 0.926403 0.940535 0.9328483 0.9713688 0.9159385 0.9318967 0.9311322 0.8723881 9.2680e-01 0.91432641 0.8148962 0.975953 0.9686339 0.976406 0.9765611 0.9937238 5 0.9243867 0.8989967 0.01762717 6 0.837375 0.734184 0.10319106 0.13888036 9.9196e-01 insignificant 1.00000 1.000000 insignificant 0.41074761 5.1134e-01 insignificant 1.00000 1.000000 insignificant 0.02816681 0.48513613 insignificant 1.00000 insignificant 0.9259474 0.8669022 0.06531085 6 0.890773 0.7910920 0.0996805 2.5457e-02 9.1597e-01 weaklyHypermeth 1.2418e-01 1.0000e+00 insignificant 1.1647e-01 9.6069e-01 insignificant 6.2620e-01 1.0000e+00 insignificant 0.0395298 1.7691e-01 insignificant 9.7740e-01 insignificant 0.9243867 0.9659498 -0.04378279 10 0.8373748 0.9299309 -0.09255603 9.9984e-01 5.7499e-05 weaklyHypometh 1.0000e+00 8.2141e-03 weaklyHypometh 9.9984e-01 1.1686e-03 weaklyHypometh 1.0000e+00 0.09471902 weaklyHypometh -0.0729320 6.6855e-02 insignificant 7.5118e-01 insignificant 0.9030956 0.8669022 0.0476893 6 0.780726 0.7910920 -0.01036626 4.1966e-01 7.0119e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.7012e-01 8.0169e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.01136299 7.7456e-01 insignificant 1.0000e+00 insignificant 0.8989967 0.9659498 -6.2328e-02 6 0.7341838 0.9299309 -1.9575e-01 1.0000e+00 4.7933e-06 weaklyHypometh 1.0000e+00 1.1983e-03 weaklyHypometh 9.9976e-01 8.8995e-03 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.10109877 3.8600e-02 weaklyHypometh 7.8497e-01 insignificant 0.8669022 0.9658580 -9.8518e-02 6 0.7910920 0.9235609 -0.13246895 9.9991e-01 1.3120e-03 weaklyHypometh 1.0000e+00 1.2262e-02 weaklyHypometh 9.9924e-01 9.4620e-03 weaklyHypometh 1.0000000 9.1864e-02 weaklyHypometh -1.1246e-01 1.2553e-02 weaklyHypometh 1.5124e-01 insignificant chr18 41900550 41901550 52188 PSTPIP2 ENSG00000152229 0.652131 508 15 0.740688 728 14 0.659890 338 11 0.7421821 324 17 0.7405168 296 11 0.785493 1670 17 0.6276681 296 11 0.7555200 491 14 0.7438051 319 14 0.708865 294 14 0.801672 861 14 0.6761355 179 10 0.77680691 435 14 0.794484 174 10 0.7746554 380 14 0.5362045 140 11 0.6876515 117 8 0.7535326 426 15 0.7536663 475 17 0.739247 930 17 0.790204 182 11 0.876263 198 14 0.673342 322 16 0.7228365 506 11 0.838747 130 14 0.8115059 860 17 0.660538 305 11 0.660837 128 9 0.729118 292 12 0.720175 1026 17 0.7463836 882 17 0.7555890 1429 17 0.7328495 472 14 0.7170747 214 14 0.7030232 586 17 0.7000467 73 7 0.7030832 381 13 0.7499573 679 17 0.788933 364 17 0.7522685 420 15 0.7452549 373 15 0.7783927 297 14 0.7660793 522 16 0.736152 0.7760861 0.712555 0.7637406 0.776709 0.821779 0.7339334 0.8004879 0.755931 0.793606 0.8380714 0.684174 0.8084789 0.7805935 0.8078491 0.5953626 0.7183849 0.8064030 0.8167121 0.813673 0.833786 0.8678067 0.761518 0.7938845 0.8755369 0.8406233 0.764667 0.686181 0.744713 0.8083435 0.8079843 0.7929261 0.7712441 0.7523153 0.7930232 8.3037e-01 0.80220823 0.8372470 0.822030 0.8172749 0.826639 0.8103154 0.8413903 11 0.8099350 0.8467562 -0.01862691 14 0.700083 0.754930 -0.05484647 0.98865522 2.3475e-01 insignificant 1.00000 1.000000 insignificant 0.98083735 4.8108e-02 weaklyHypometh 1.00000 1.000000 insignificant -0.02625418 0.30239837 insignificant 1.00000 insignificant 0.8100874 0.8168193 -0.01026872 14 0.720458 0.6898318 0.0306266 4.6886e-02 4.2729e-01 inconclusive 2.2012e-01 1.0000e+00 insignificant 7.2918e-01 4.9560e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 0.0048684 7.7472e-01 insignificant 1.0000e+00 insignificant 0.8099350 0.7874494 -0.03396320 14 0.7000834 0.7460050 -0.04592163 9.9310e-01 5.7513e-03 weaklyHypometh 1.0000e+00 2.1520e-01 insignificant 9.9998e-01 2.4304e-03 weaklyHypometh 1.0000e+00 0.15921509 insignificant -0.0436447 1.6003e-02 weaklyHypometh 2.9370e-01 insignificant 0.8467317 0.8168193 0.0077291 15 0.741315 0.6898318 0.05148304 2.6725e-02 5.2269e-01 weaklyHypermeth 1.4415e-01 1.0000e+00 insignificant 2.0026e-01 4.9374e-01 insignificant 9.7211e-01 1.0000000 insignificant 0.03112260 1.7275e-01 insignificant 9.8714e-01 insignificant 0.8467562 0.7874494 -1.7759e-02 14 0.7549298 0.7460050 8.9248e-03 9.2405e-01 6.5790e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.5389e-01 6.7575e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01739057 4.3480e-01 insignificant 1.0000e+00 insignificant 0.8168193 0.7882472 -3.5655e-02 15 0.6898318 0.7874497 -0.09761794 9.3371e-01 1.8186e-03 weaklyHypometh 1.0000e+00 1.6093e-02 weaklyHypometh 9.6708e-01 1.7256e-02 weaklyHypometh 1.0000000 1.5271e-01 insignificant -4.8513e-02 2.2742e-03 weaklyHypometh 4.2115e-02 weaklyHypometh chr18 41986750 41987750 52190 ENSG00000200088 0.499874 163 6 0.403163 213 6 0.554635 145 6 0.4667293 114 4 0.3964418 88 5 0.658947 145 4 0.4849134 129 6 0.3444663 123 6 0.4314667 200 6 0.507035 148 6 0.535492 198 6 0.4618437 72 5 0.46971565 230 6 0.931783 58 2 0.4312084 174 6 0.4876190 61 5 0.3555556 78 5 0.4856125 154 3 0.5496270 125 6 0.410526 161 6 0.529167 47 5 0.264118 64 3 0.493269 149 6 0.6541293 57 6 0.602778 35 2 0.4796052 266 6 0.368551 67 5 0.700000 27 2 0.547323 134 6 0.500760 264 6 0.5867901 233 6 0.5509348 194 6 0.2872475 143 6 0.3668609 143 6 0.4797980 144 4 0.5000000 11 1 0.4375000 86 5 0.4358819 178 6 0.444696 155 5 0.4447941 169 6 0.4324295 114 5 0.4898394 134 6 0.3054012 107 3 0.654767 0.4991257 0.689394 0.6099850 0.588971 0.723791 0.6112909 0.5184643 0.569524 0.634618 0.6288585 0.585895 0.6027253 0.6443535 0.5726468 0.6622635 0.5042929 0.6093769 0.6863262 0.554135 0.526139 0.4590965 0.627548 0.7424861 0.7106280 0.6359048 0.537007 0.703694 0.667337 0.6458071 0.6861626 0.6457561 0.4924791 0.5797017 0.3476065 6.2602e-01 0.63003221 0.6102870 0.610773 0.6138195 0.604286 0.6427848 0.5149222 1 0.5966175 0.6428107 -0.03780459 6 0.475251 0.520898 -0.04564676 0.99737411 6.6914e-03 weaklyHypometh 1.00000 0.393612 insignificant 0.98923854 1.8878e-02 weaklyHypometh 1.00000 0.827451 insignificant -0.02978613 0.50854461 lowCoverage 1.00000 lowCoverage 0.5966175 0.5404255 0.01333527 6 0.475251 0.4430066 0.0322443 7.3536e-03 4.7245e-01 weaklyHypermeth 4.2754e-02 1.0000e+00 weaklyHypermeth 3.0796e-02 7.8510e-01 weaklyHypermeth 1.9868e-01 1.0000e+00 insignificant 0.0754513 1.0039e-01 lowCoverage 6.3140e-01 lowCoverage 0.5966175 0.6833579 -0.01249263 5 0.4752509 0.4506267 0.02462420 5.0594e-02 3.4412e-01 insignificant 4.9602e-01 1.0000e+00 insignificant 3.6310e-02 4.0697e-01 inconclusive 4.6593e-01 1.00000000 insignificant 0.0699006 1.2292e-01 insignificant 1.0000e+00 insignificant 0.6428107 0.5404255 0.0525423 6 0.520898 0.4430066 0.07789105 1.1299e-03 8.3196e-01 weaklyHypermeth 8.1877e-03 1.0000e+00 weaklyHypermeth 3.3198e-02 9.1368e-01 weaklyHypermeth 2.2431e-01 1.0000000 insignificant 0.10523740 4.1183e-02 lowCoverage 3.5502e-01 lowCoverage 0.6428107 0.6833579 2.6529e-02 5 0.5208976 0.4506267 7.0271e-02 1.6477e-03 7.3083e-01 weaklyHypermeth 2.9423e-02 1.0000e+00 weaklyHypermeth 6.2596e-03 8.8411e-01 weaklyHypermeth 1.2519e-01 1.0000e+00 insignificant 0.09968670 5.0752e-02 lowCoverage 8.2926e-01 lowCoverage 0.5404255 0.6833579 -9.5038e-03 5 0.4430066 0.4506267 -0.00762009 7.1590e-01 4.4387e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.5997e-01 6.6734e-01 insignificant 1.0000000 1.0000e+00 insignificant -5.5507e-03 9.0393e-01 lowCoverage 1.0000e+00 lowCoverage chr18 41987550 41988550 52191 ENSG00000200088 0.861490 356 5 0.762508 270 5 0.857026 136 5 0.8711751 358 5 0.9441429 108 5 0.935495 434 5 0.8358066 114 5 0.8366913 235 5 0.8055813 299 5 0.876668 229 5 0.815972 258 5 0.8663915 69 4 0.87380324 294 5 0.862713 188 5 0.8543553 183 5 0.9428105 120 4 0.7423260 56 4 0.8531679 461 5 0.8609063 117 5 0.864590 350 5 0.872619 62 4 0.827097 139 5 0.876363 184 5 0.8998846 99 5 0.857273 79 5 0.8845887 313 5 0.790488 102 5 0.943838 94 4 0.842899 214 5 0.899889 381 5 0.9031523 276 5 0.8348588 367 5 0.7747441 253 5 0.8404762 96 5 0.5000000 120 3 0.9000000 17 2 0.9064815 175 5 0.9515994 243 5 0.886283 307 5 0.8878036 314 5 0.9049904 334 5 0.9261616 271 5 0.9258538 325 5 0.846860 0.7542068 0.844865 0.8651317 0.951605 0.926707 0.8342445 0.8448536 0.819814 0.859712 0.7948320 0.841884 0.8562863 0.8344375 0.8425339 0.9353011 0.8234698 0.8525042 0.8591637 0.869418 0.854975 0.8324525 0.879334 0.8460996 0.8446409 0.8777896 0.822366 0.893986 0.811599 0.8966846 0.8993895 0.8476073 0.8131603 0.8630952 0.7363465 8.4877e-01 0.93384202 0.9437732 0.867516 0.8871169 0.903661 0.9023457 0.9237838 4 0.8522114 0.8640313 -0.01601178 5 0.857318 0.867143 -0.00982477 0.79594837 2.4718e-01 insignificant 1.00000 1.000000 insignificant 0.87749141 4.2360e-01 insignificant 1.00000 1.000000 insignificant -0.01323146 0.43045212 lowCoverage 1.00000 lowCoverage 0.8522114 0.8867925 -0.03601318 5 0.857318 0.8920219 -0.0347040 9.3884e-01 1.2800e-03 weaklyHypometh 1.0000e+00 8.5335e-02 weaklyHypometh 9.9284e-01 1.2653e-03 weaklyHypometh 1.0000e+00 1.6414e-01 insignificant 0.0439641 5.4617e-01 lowCoverage 1.0000e+00 lowCoverage 0.8522114 0.9052224 -0.04608457 5 0.8573179 0.9064992 -0.04918125 9.9971e-01 2.8164e-03 weaklyHypometh 1.0000e+00 1.2802e-01 insignificant 9.9809e-01 3.3146e-03 weaklyHypometh 1.0000e+00 0.18414629 insignificant -0.0500374 2.6158e-03 lowCoverage 1.0061e-01 lowCoverage 0.8645022 0.8838496 -0.0192524 5 0.905102 0.6371585 0.26794342 9.6927e-01 8.5012e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 8.0084e-01 3.9677e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant 0.05719558 4.3843e-01 lowCoverage 1.0000e+00 lowCoverage 0.8640313 0.9052224 -2.9170e-02 5 0.8671427 0.9064992 -3.9356e-02 9.7138e-01 7.6364e-03 weaklyHypometh 1.0000e+00 3.6364e-01 insignificant 9.9278e-01 3.4829e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.03680594 2.5630e-02 lowCoverage 6.5717e-01 lowCoverage 0.8867925 0.9052224 -1.0080e-02 5 0.8920219 0.9064992 -0.01447727 1.5321e-01 6.0612e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.4619e-02 9.6182e-01 insignificant 1.0000000 1.0000e+00 insignificant -9.4002e-02 2.2256e-01 lowCoverage 1.0000e+00 lowCoverage chr18 42002050 42003050 52194 ENSG00000200088 0.817813 177 5 0.635841 196 5 0.667607 82 5 0.7127607 175 5 0.7637162 102 5 0.622145 747 5 0.6362680 101 5 0.7222776 207 5 0.7604060 102 5 0.649672 102 5 0.762155 260 5 0.6166667 26 3 0.70996237 144 5 0.735126 71 5 0.6503783 125 5 0.4303030 25 1 0.6433333 19 2 0.7017640 185 5 0.6239097 179 5 0.782636 572 5 0.602137 393 5 0.619632 271 5 0.796821 132 5 0.6655022 250 5 0.661619 269 5 0.8287500 177 5 0.712785 884 5 0.581132 127 5 0.567146 156 5 0.699302 192 5 0.7166957 211 5 0.6765767 330 5 0.7399536 249 5 0.6517884 129 5 0.4850743 247 5 0.5915909 109 5 0.6524634 150 5 0.5076485 204 5 0.721507 182 5 0.5150333 187 5 0.7829763 152 5 0.6855695 74 3 0.7541176 118 5 0.858087 0.6616434 0.730578 0.7813352 0.767641 0.838886 0.7306502 0.7878311 0.817657 0.784255 0.8334405 0.658209 0.7793271 0.8605173 0.7550281 0.5568295 0.6344776 0.7725157 0.7583959 0.851122 0.786244 0.7025973 0.807172 0.7510817 0.7615846 0.8201123 0.763758 0.699755 0.766052 0.7501852 0.8085554 0.8127558 0.7200235 0.7471573 0.7543272 6.3297e-01 0.74261959 0.8141334 0.800344 0.8007816 0.769614 0.7836017 0.8196373 5 0.7906589 0.7320165 0.04308578 5 0.714406 0.660439 0.05396666 0.01981515 9.8226e-01 weaklyHypermeth 1.00000 1.000000 insignificant 0.33209911 6.8179e-01 insignificant 1.00000 1.000000 insignificant 0.00489555 0.87173569 lowCoverage 1.00000 lowCoverage 0.7906589 0.7187500 0.07567538 5 0.714406 0.5587816 0.1556243 8.3617e-05 9.9991e-01 weaklyHypermeth 6.2400e-04 1.0000e+00 weaklyHypermeth 8.9240e-03 9.9601e-01 weaklyHypermeth 6.4702e-02 1.0000e+00 weaklyHypermeth 0.0774839 1.1734e-01 lowCoverage 7.1988e-01 lowCoverage 0.7906589 0.8204769 -0.00983645 5 0.7144059 0.6994308 0.01497508 1.7662e-01 3.2594e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.3748e-01 3.3541e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0096036 8.5693e-01 lowCoverage 1.0000e+00 lowCoverage 0.7320165 0.7187500 0.0325192 5 0.660439 0.5587816 0.10165764 1.2548e-03 9.8378e-01 weaklyHypermeth 9.0274e-03 1.0000e+00 weaklyHypermeth 5.4362e-03 9.8810e-01 weaklyHypermeth 4.4559e-02 1.0000000 weaklyHypermeth 0.07258837 1.4890e-01 insignificant 8.9700e-01 insignificant 0.7320165 0.8204769 -4.4292e-02 5 0.6604392 0.6994308 -3.8992e-02 7.7269e-01 5.5010e-03 weaklyHypometh 1.0000e+00 3.5583e-01 insignificant 9.1506e-01 9.9284e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01449911 7.9167e-01 lowCoverage 1.0000e+00 lowCoverage 0.7187500 0.8204769 -6.9949e-02 5 0.5587816 0.6994308 -0.14064922 9.9870e-01 4.1644e-04 weaklyHypometh 1.0000e+00 4.2932e-03 weaklyHypometh 9.9806e-01 6.9119e-03 weaklyHypometh 1.0000000 7.4321e-02 weaklyHypometh -8.7087e-02 1.9273e-01 lowCoverage 1.0000e+00 lowCoverage chr18 42083050 42084050 52198 C18orf25 ENSG00000152242 0.851434 108 5 0.704953 137 5 0.711655 48 5 0.7519947 81 5 0.8190476 29 5 0.610042 166 5 0.6555556 20 2 0.8420330 102 5 0.7575758 49 5 0.935374 36 5 0.765118 164 5 0.8000000 5 0 0.81349206 39 5 0.780000 27 5 0.8400000 50 5 1.0000000 8 0 0.4000000 11 0 0.7411510 75 5 0.7233271 145 5 0.865063 141 5 0.846429 25 3 0.826667 20 2 0.726651 55 5 0.7742857 31 5 0.885000 32 5 0.8133333 75 5 0.803399 73 3 0.791429 22 3 0.782757 104 5 0.801984 108 5 0.9140533 96 5 0.8473089 152 5 0.8099076 80 5 0.7942857 42 5 0.7567857 73 5 0.9333333 9 0 0.7797619 38 3 0.7866165 133 5 0.730413 102 5 0.8209586 91 5 0.7978571 62 5 0.9115646 41 5 0.7952991 70 5 0.780354 0.7169284 0.690942 0.7746178 0.772917 0.744663 0.5302083 0.7895132 0.693419 0.929688 0.8364398 0.765625 0.8511285 0.7911458 0.8250000 1.0000000 0.4010417 0.7561068 0.7619313 0.833307 0.820033 0.8093750 0.733100 0.7665923 0.8964844 0.8284226 0.798141 0.753348 0.807444 0.7989211 0.8839850 0.7996040 0.7480388 0.8151786 0.7745536 9.6354e-01 0.68917411 0.8388363 0.779218 0.7424445 0.806641 0.8896329 0.7823775 0 0.7719054 0.7994956 -0.02971705 5 0.800435 0.852444 -0.05200986 0.97639989 1.6404e-01 insignificant 1.00000 1.000000 insignificant 0.97731325 2.7771e-01 insignificant 1.00000 1.000000 insignificant -0.04938389 0.12943502 lowCoverage 1.00000 lowCoverage 0.7719054 0.7840000 -0.01308182 5 0.800435 0.8360984 -0.0356639 8.5945e-01 5.0962e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8687e-01 4.0800e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0417243 2.8686e-01 lowCoverage 1.0000e+00 lowCoverage 0.7716863 0.7841530 -0.01493835 5 0.7336713 0.7660623 -0.03239101 9.8864e-01 3.6597e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9878e-01 3.2179e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0428278 3.1037e-01 lowCoverage 1.0000e+00 lowCoverage 0.7994956 0.7840000 0.0162984 5 0.852444 0.8360984 0.01634600 6.4308e-01 9.7072e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.7405e-01 8.5293e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.00765956 8.0157e-01 lowCoverage 1.0000e+00 lowCoverage 0.7994956 0.7857143 1.4504e-02 5 0.8524444 0.8420801 1.0364e-02 7.9417e-01 6.7069e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.4076e-01 7.2697e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00655609 8.4763e-01 lowCoverage 1.0000e+00 lowCoverage 0.7840000 0.7857143 3.4524e-04 5 0.8360984 0.8420801 -0.00598173 9.3280e-01 4.8125e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.0747e-01 7.7895e-01 insignificant 1.0000000 1.0000e+00 insignificant -1.1035e-03 9.7804e-01 lowCoverage 1.0000e+00 lowCoverage chr18 43788050 43789050 52231 SMAD2 ENSG00000175387 0.069500 1715 47 0.028504 1246 48 0.012621 1009 48 0.0297823 1155 47 0.0228256 824 43 0.060323 1680 44 0.0113623 1391 45 0.0625085 961 45 0.0098754 1072 45 0.020279 847 45 0.058042 1344 45 0.0096274 902 45 0.03330401 1133 45 0.033102 282 24 0.0197451 1200 45 0.0044413 799 33 0.0215829 625 33 0.0272989 2005 41 0.0317761 1176 45 0.016454 1343 44 0.010196 404 33 0.062872 725 37 0.048837 829 48 0.0478701 473 38 0.031469 967 38 0.0134534 1521 48 0.025014 1011 44 0.011057 612 34 0.015918 1152 45 0.050093 1575 48 0.0439911 1818 48 0.0138421 1691 45 0.0065210 972 42 0.0145322 1192 45 0.0405827 824 20 0.0167157 528 36 0.0429113 681 35 0.0052559 1398 48 0.037929 2236 45 0.0119967 1533 47 0.0133917 1414 44 0.0108888 1913 44 0.0175779 1440 45 0.036707 0.0190957 0.020941 0.0194293 0.016923 0.035440 0.0190823 0.0387589 0.015487 0.038699 0.0281548 0.012151 0.0219224 0.0405425 0.0276932 0.0050368 0.0330598 0.0113557 0.0163674 0.023421 0.013461 0.0147198 0.017569 0.0274703 0.0172159 0.0206261 0.025287 0.010109 0.019926 0.0185102 0.0226053 0.0283075 0.0068975 0.0117550 0.0324362 1.2622e-02 0.02713335 0.0061795 0.020774 0.0176710 0.015103 0.0205365 0.0174147 37 0.0238703 0.0219161 0.00299547 46 0.034363 0.047239 -0.01287591 0.41597714 9.3176e-01 insignificant 1.00000 1.000000 insignificant 0.30814911 9.9809e-01 insignificant 1.00000 1.000000 insignificant -0.00207003 0.76649977 insignificant 1.00000 insignificant 0.0238714 0.0107239 0.01744189 46 0.035011 0.0147224 0.0202887 4.0132e-02 8.8937e-01 weaklyHypermeth 1.9020e-01 1.0000e+00 insignificant 3.3710e-02 9.8703e-01 weaklyHypermeth 2.1201e-01 1.0000e+00 insignificant 0.0080613 3.4026e-01 insignificant 1.0000e+00 insignificant 0.0238830 0.0216729 0.00568928 42 0.0429200 0.0256075 0.01731254 2.6634e-01 5.0159e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.0533e-01 7.8549e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0107908 1.3104e-01 insignificant 1.0000e+00 insignificant 0.0218412 0.0107239 0.0134839 48 0.038696 0.0147224 0.02397358 1.8074e-01 9.6157e-01 insignificant 8.0690e-01 1.0000e+00 insignificant 6.4749e-01 9.8892e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.01013129 2.6676e-01 insignificant 1.0000e+00 insignificant 0.0218549 0.0216755 2.2980e-03 44 0.0410178 0.0261197 1.4898e-02 7.7907e-01 5.0096e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7374e-01 7.7529e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01286087 1.0565e-01 insignificant 1.0000e+00 insignificant 0.0107315 0.0216755 -1.1555e-02 44 0.0156058 0.0261197 -0.01051388 9.9713e-01 1.9744e-01 insignificant 1.0000e+00 9.4925e-01 insignificant 9.9995e-01 4.8068e-01 insignificant 1.0000000 1.0000e+00 insignificant 2.7296e-03 7.5407e-01 insignificant 1.0000e+00 insignificant chr18 43802050 43803050 52234 SMAD2 ENSG00000175387 0.875534 238 5 0.811425 284 5 0.845463 111 5 0.9523718 185 5 0.8400000 62 5 0.905333 341 5 0.8420261 75 5 0.9453211 209 5 0.8504648 150 5 0.900519 167 5 0.826429 154 5 0.9008658 48 5 0.94858971 235 5 0.925000 65 4 0.8737667 117 5 0.8128571 22 2 0.5100000 26 4 0.8928232 219 5 0.9415400 86 5 0.921800 287 5 0.888405 81 5 0.944136 103 5 0.928701 173 5 0.8683498 87 5 0.864755 55 5 0.9401803 313 5 0.860500 106 5 0.900000 58 5 0.914893 175 5 0.961758 332 5 0.9338458 339 5 0.9197905 309 5 0.8205610 298 5 0.9122649 82 5 0.7944804 313 5 0.8905128 40 2 0.8334928 115 5 0.7566487 257 5 0.970541 190 5 0.9762963 189 5 0.9206015 123 5 0.9456827 199 5 0.9627034 200 5 0.863370 0.8279893 0.848318 0.9394504 0.873991 0.911200 0.8436751 0.9396027 0.858099 0.888267 0.8214606 0.877594 0.9430520 0.9119364 0.8409471 0.7565663 0.5439462 0.8970419 0.9328823 0.917322 0.866464 0.9392283 0.919591 0.8900020 0.8669090 0.9326667 0.844090 0.941704 0.916970 0.9635295 0.9252576 0.9167484 0.8293133 0.9089741 0.7454188 8.7754e-01 0.85371296 0.7118533 0.966943 0.9836904 0.927202 0.9451708 0.9545901 5 0.8864005 0.9239794 -0.03787534 5 0.886526 0.926318 -0.03979200 0.99951339 3.9426e-03 weaklyHypometh 1.00000 0.315485 insignificant 0.97796052 8.8255e-03 weaklyHypometh 1.00000 0.626368 insignificant -0.04433639 0.07056870 lowCoverage 1.00000 lowCoverage 0.8864005 0.8380090 0.04735304 5 0.886526 0.8419160 0.0446102 7.7877e-02 8.9735e-01 insignificant 3.5723e-01 1.0000e+00 insignificant 5.3260e-01 5.1051e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0314463 3.4282e-01 lowCoverage 1.0000e+00 lowCoverage 0.8864005 0.9600444 -0.07406644 5 0.8865262 0.9608606 -0.07433437 9.9999e-01 1.3201e-04 weaklyHypometh 1.0000e+00 1.3582e-02 weaklyHypometh 9.9999e-01 3.6569e-05 weaklyHypometh 1.0000e+00 0.00731372 weaklyHypometh -0.0890586 9.9733e-04 lowCoverage 6.4842e-02 lowCoverage 0.9239794 0.8380090 0.0859922 5 0.926318 0.8419160 0.08440215 7.5742e-03 9.9741e-01 weaklyHypermeth 4.7338e-02 1.0000e+00 weaklyHypermeth 1.0751e-01 6.9505e-01 insignificant 5.8112e-01 1.0000000 insignificant 0.07578271 2.2628e-02 lowCoverage 2.1478e-01 lowCoverage 0.9239794 0.9600444 -3.6158e-02 5 0.9263182 0.9608606 -3.4542e-02 9.9889e-01 5.9098e-03 weaklyHypometh 1.0000e+00 3.5583e-01 insignificant 9.9945e-01 3.8487e-03 weaklyHypometh 1.0000e+00 6.4145e-01 insignificant -0.04472221 8.2515e-03 weaklyHypometh 3.3006e-01 insignificant 0.8380090 0.9600444 -1.1865e-01 5 0.8419160 0.9608606 -0.11894452 9.9871e-01 1.4695e-02 weaklyHypometh 1.0000e+00 9.9288e-02 weaklyHypometh 9.9872e-01 3.4839e-03 weaklyHypometh 1.0000000 4.4100e-02 weaklyHypometh -1.2050e-01 2.6291e-03 lowCoverage 4.6949e-02 lowCoverage chr18 44250050 44251050 52243 ENSG00000206944 0.850543 459 16 0.936165 118 10 0.697017 147 8 0.8597386 434 15 0.8182292 91 7 0.731738 412 15 0.8245536 84 8 0.8132078 129 9 0.6061577 67 5 0.909259 96 6 0.871641 214 11 0.8234127 63 6 0.65752618 158 9 NA 0 0 0.8111463 115 10 0.7715812 69 7 0.6510582 60 7 0.8622447 390 15 0.8650870 202 12 0.874941 268 14 0.811224 47 6 0.838946 111 11 0.863883 211 11 0.8365967 59 6 0.852564 71 4 0.8771961 194 12 0.859531 112 8 0.900000 14 0 0.660296 94 7 0.824893 192 15 0.8250023 258 14 0.8512097 462 15 0.7643234 130 9 0.8344261 125 10 0.8285600 324 15 0.8395833 73 7 0.6595238 43 5 0.7447915 207 14 0.889767 419 15 0.9106876 422 15 0.9021314 407 15 0.8832007 276 15 0.9276410 448 15 0.865334 0.9213752 0.740093 0.8891983 0.822255 0.855180 0.8429748 0.8637714 0.693507 0.896873 0.8445944 0.895851 0.8240799 NA 0.9082089 0.7999002 0.6635301 0.8989643 0.9163651 0.898054 0.940120 0.8157970 0.875881 0.8619125 0.8283433 0.8881304 0.877861 0.796008 0.819054 0.9044314 0.8764665 0.8958602 0.7181023 0.8046064 0.8494626 8.4531e-01 0.68085258 0.8435532 0.922901 0.9100866 0.925055 0.9405690 0.9390377 3 0.8531879 0.8454795 0.00339558 14 0.783008 0.850113 -0.06710473 0.60493160 7.0056e-01 insignificant 1.00000 1.000000 insignificant 0.90385973 2.1908e-01 insignificant 1.00000 1.000000 insignificant -0.03159018 0.25686725 insignificant 1.00000 insignificant 0.8534266 0.7982262 0.04998460 15 0.829067 0.7921489 0.0369185 2.5028e-03 9.9898e-01 weaklyHypermeth 1.5741e-02 1.0000e+00 weaklyHypermeth 6.4387e-02 9.6543e-01 insignificant 3.7004e-01 1.0000e+00 insignificant 0.0233203 5.2742e-01 insignificant 1.0000e+00 insignificant 0.8535014 0.9264706 -0.06026952 14 0.8308841 0.9087947 -0.07791057 1.0000e+00 4.1778e-05 weaklyHypometh 1.0000e+00 6.9630e-03 weaklyHypometh 9.9969e-01 5.6652e-05 weaklyHypometh 1.0000e+00 0.00944195 weaklyHypometh -0.1008305 2.0401e-04 weaklyHypometh 4.0801e-02 weaklyHypometh 0.8452250 0.7982262 0.0440447 14 0.841296 0.7921489 0.04914708 8.3618e-03 9.8441e-01 weaklyHypermeth 5.1616e-02 1.0000e+00 weaklyHypermeth 5.5735e-02 9.9094e-01 insignificant 3.3374e-01 1.0000000 insignificant 0.05491052 1.3728e-01 insignificant 8.4743e-01 insignificant 0.8447991 0.9264706 -6.1941e-02 14 0.8313769 0.9087947 -7.7418e-02 1.0000e+00 7.3918e-05 weaklyHypometh 1.0000e+00 1.4237e-02 weaklyHypometh 9.9956e-01 2.1600e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.06924037 2.5196e-03 weaklyHypometh 1.5747e-01 insignificant 0.7980022 0.9264706 -1.0350e-01 14 0.7791582 0.9087947 -0.12963651 1.0000e+00 2.2081e-07 weaklyHypometh 1.0000e+00 3.7426e-06 weaklyHypometh 9.9997e-01 5.7802e-04 weaklyHypometh 1.0000000 8.8926e-03 weaklyHypometh -1.2415e-01 6.5591e-03 weaklyHypometh 9.5060e-02 weaklyHypometh chr18 44561550 44562550 52259 KIAA0427 ENSG00000134030 0.844270 315 9 0.681738 184 10 0.578564 204 12 0.8476403 250 9 0.6399032 70 4 0.657584 386 12 0.6019360 61 4 0.6198912 259 12 0.7912219 123 5 0.769390 165 5 0.806903 325 12 0.2560915 87 7 0.44243484 288 9 0.731455 106 3 0.6693872 172 9 0.4904339 82 8 0.4440476 36 3 0.3834598 392 9 0.5185378 243 9 0.736760 222 12 0.693953 156 12 0.132459 418 10 0.889883 172 10 0.6252148 159 12 0.682582 156 9 0.6071074 273 10 0.694913 237 9 0.558650 69 6 0.450908 170 4 0.662418 313 12 0.4250119 252 12 0.9144844 309 10 0.0327652 210 11 0.1283924 223 9 0.1934524 141 3 0.0397756 132 9 0.0353827 288 11 0.1313195 372 12 0.053685 447 9 0.1223504 297 8 0.2418584 296 9 0.1066467 370 9 0.3130258 337 9 0.773996 0.6851658 0.451632 0.7546069 0.732366 0.700277 0.6058798 0.6572150 0.651235 0.806533 0.8639944 0.287759 0.4691530 0.5480174 0.5706201 0.4710711 0.4650691 0.4158913 0.5709946 0.692502 0.852245 0.1153539 0.844258 0.6156395 0.7507296 0.6716363 0.721843 0.656319 0.637539 0.6802992 0.4655821 0.8754298 0.0092522 0.0356895 0.0352050 1.9309e-02 0.02975725 0.0509914 0.100262 0.0714392 0.179190 0.0624906 0.2487031 2 0.6416331 0.6154993 0.02667095 10 0.612462 0.532694 0.07976764 0.02966698 9.8197e-01 weaklyHypermeth 1.00000 1.000000 insignificant 0.52332777 3.5097e-01 insignificant 1.00000 1.000000 insignificant 0.01411713 0.84367312 insignificant 1.00000 insignificant 0.6431651 0.0490483 0.59698064 10 0.622438 0.0977525 0.5246857 6.1741e-56 9.9999e-01 hypermethylated 2.4696e-54 1.0000e+00 hypermethylated 2.7227e-22 9.9996e-01 hypermethylated 1.9448e-20 1.0000e+00 hypermethylated 0.5320678 1.2220e-10 hypermethylated 7.6373e-09 hypermethylated 0.6414523 0.1523482 0.48875720 9 0.5866259 0.1557378 0.43088815 3.9292e-33 1.0000e+00 hypermethylated 1.3097e-30 1.0000e+00 hypermethylated 5.6903e-17 1.0000e+00 hypermethylated 1.8968e-14 1.00000000 hypermethylated 0.4580692 2.5748e-05 hypermethylated 6.4369e-03 hypermethylated 0.6163616 0.0490483 0.5662314 12 0.563316 0.0977525 0.46556339 3.8693e-25 1.0000e+00 hypermethylated 9.9214e-24 1.0000e+00 hypermethylated 5.7304e-18 1.0000e+00 hypermethylated 3.8203e-16 1.0000000 hypermethylated 0.51795065 1.3997e-06 hypermethylated 4.8265e-05 hypermethylated 0.6153559 0.1523482 4.6468e-01 9 0.5015404 0.1557378 3.4580e-01 5.6440e-13 1.0000e+00 hypermethylated 9.4066e-11 1.0000e+00 hypermethylated 1.3189e-10 1.0000e+00 hypermethylated 4.3963e-08 1.0000e+00 hypermethylated 0.44395202 4.8628e-05 hypermethylated 1.6209e-02 hypermethylated 0.0490483 0.1525229 -1.0402e-01 9 0.0977525 0.1796974 -0.08194493 9.9986e-01 2.9627e-07 weaklyHypometh 1.0000e+00 4.8568e-06 weaklyHypometh 9.9999e-01 1.0195e-06 weaklyHypometh 1.0000000 2.9130e-05 weaklyHypometh -7.3999e-02 2.2327e-01 insignificant 1.0000e+00 insignificant chr18 44570550 44571550 52260 KIAA0427 ENSG00000134030 0.900255 425 11 0.738641 326 11 0.878735 296 11 0.9331010 405 11 0.9464646 196 11 0.929062 605 11 0.8421299 176 10 0.9153570 366 11 0.8751805 194 11 0.888724 375 11 0.904729 373 11 0.8735422 188 11 0.90566318 407 11 0.884199 193 10 0.9643406 395 11 0.9356061 105 11 0.7982018 34 3 0.8470352 506 11 0.9065628 466 11 0.906896 396 11 0.768585 158 11 0.812548 284 11 0.939620 257 11 0.8357730 172 8 0.942072 154 11 0.7739125 402 11 0.663825 294 11 0.903357 180 10 0.937549 288 11 0.939750 443 11 0.9548610 338 11 0.8875369 464 11 0.7480585 224 11 0.7838533 212 11 0.5203925 518 11 0.9002468 134 9 0.4560791 295 12 0.8603011 316 11 0.884863 515 11 0.8621063 420 11 0.8401679 430 11 0.9339293 372 11 0.8521553 450 11 0.903532 0.8321346 0.875325 0.9384464 0.954726 0.928926 0.9182022 0.9222332 0.888498 0.900768 0.9099555 0.893120 0.9111045 0.8854149 0.9600529 0.9573430 0.9304518 0.8514235 0.9070209 0.911930 0.887717 0.9505253 0.930740 0.9262925 0.9344881 0.9112393 0.867316 0.964358 0.941318 0.9414090 0.9511823 0.8949678 0.8918389 0.7605177 0.5049827 9.1154e-01 0.60166602 0.9387982 0.965622 0.9333781 0.926987 0.9307913 0.8652836 11 0.9052435 0.9177603 -0.01544868 11 0.763358 0.775015 -0.01165718 0.99533285 1.3745e-01 insignificant 1.00000 1.000000 insignificant 0.99774611 8.2413e-02 insignificant 1.00000 1.000000 insignificant 0.02543895 0.39623675 insignificant 1.00000 insignificant 0.9052435 0.7589864 0.14345606 11 0.763358 0.5950108 0.1683468 1.4213e-10 9.9997e-01 weaklyHypermeth 1.6721e-09 1.0000e+00 weaklyHypermeth 7.1739e-02 9.4732e-01 insignificant 4.0761e-01 1.0000e+00 insignificant 0.1772328 6.2884e-02 insignificant 4.5029e-01 insignificant 0.9057926 0.9247706 -0.01855640 11 0.9125303 0.9268358 -0.01430547 9.7098e-01 1.9979e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.1000e-01 3.5015e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0140771 5.0561e-01 insignificant 1.0000e+00 insignificant 0.9172253 0.7580930 0.1617558 11 0.726576 0.5578226 0.16875372 3.7803e-07 1.0000e+00 weaklyHypermeth 4.1090e-06 1.0000e+00 weaklyHypermeth 4.3068e-02 9.9997e-01 weaklyHypermeth 2.7432e-01 1.0000000 insignificant 0.15179388 1.0077e-01 insignificant 6.8087e-01 insignificant 0.9195906 0.9236397 -2.0384e-03 11 0.8093005 0.8748020 -6.5501e-02 9.7851e-01 8.8195e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.8434e-01 9.7027e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01136189 7.2253e-01 insignificant 1.0000e+00 insignificant 0.7613973 0.9234998 -1.5852e-01 11 0.6327048 0.8555407 -0.22283595 9.9998e-01 2.8957e-03 weaklyHypometh 1.0000e+00 2.3166e-02 weaklyHypometh 9.9878e-01 1.2016e-01 insignificant 1.0000000 7.2384e-01 insignificant -1.6316e-01 8.0360e-02 insignificant 5.9088e-01 insignificant chr18 44607050 44608050 52264 KIAA0427 ENSG00000134030 0.822965 652 7 0.782784 521 11 0.761226 216 7 0.8363089 506 7 0.7286951 238 11 0.852860 568 7 0.8563883 238 7 0.8805044 391 11 0.6294495 262 6 0.804444 246 7 0.891837 467 7 0.8163535 130 6 0.78690487 388 7 0.812822 171 7 0.7619643 276 7 0.5864103 76 4 0.7797619 274 5 0.6894155 640 7 0.8104887 384 7 0.779300 438 7 0.864597 153 7 0.449670 156 7 0.626661 276 7 0.8650585 171 8 0.828606 214 7 0.8583698 577 7 0.680105 288 7 0.665072 145 7 0.658783 486 7 0.819732 568 8 0.8103144 457 8 0.8475515 551 7 0.6622813 333 7 0.6050409 329 7 0.6000000 223 5 0.8097793 108 7 0.5516278 189 7 0.7438590 586 8 0.505430 507 7 0.4139207 426 7 0.6445652 537 8 0.5999831 383 7 0.5720857 460 8 0.751531 0.6638628 0.802725 0.7786845 0.745451 0.813763 0.7388037 0.8121354 0.664165 0.798895 0.8123797 0.784223 0.7545612 0.7938774 0.7275842 0.5964136 0.7612769 0.6405247 0.7849269 0.744644 0.808890 0.4435992 0.829524 0.8144275 0.8148829 0.8088073 0.722801 0.718540 0.827549 0.8046003 0.8264917 0.8121842 0.5713871 0.5443468 0.3596786 8.2749e-01 0.51348289 0.7268124 0.625505 0.5524015 0.651375 0.5651758 0.6343472 6 0.7857647 0.8085106 -0.02305731 7 0.828579 0.780857 0.04772200 0.29536102 2.8780e-01 insignificant 1.00000 1.000000 insignificant 0.29363749 2.1905e-01 insignificant 1.00000 1.000000 insignificant 0.03566745 0.40341106 insignificant 1.00000 insignificant 0.7857647 0.7238257 0.08639487 7 0.828579 0.6479960 0.1805826 1.6294e-08 8.0142e-01 weaklyHypermeth 1.6132e-07 1.0000e+00 weaklyHypermeth 4.8582e-03 7.3716e-01 weaklyHypermeth 3.8254e-02 1.0000e+00 weaklyHypermeth 0.1214461 2.6899e-02 weaklyHypermeth 2.3596e-01 insignificant 0.7857647 0.6639273 0.12706482 7 0.8285786 0.4875097 0.34106889 6.0902e-14 1.0000e+00 weaklyHypermeth 7.6127e-12 1.0000e+00 weaklyHypermeth 1.1901e-09 1.0000e+00 weaklyHypermeth 1.4876e-07 1.00000000 weaklyHypermeth 0.2363473 2.1046e-03 weaklyHypermeth 9.1504e-02 weaklyHypermeth 0.8085106 0.7238257 0.1079788 7 0.780857 0.6479960 0.13286059 3.9868e-04 6.0953e-01 weaklyHypermeth 3.1147e-03 1.0000e+00 weaklyHypermeth 2.0264e-01 6.9169e-01 insignificant 9.7421e-01 1.0000000 insignificant 0.08577865 1.4218e-01 insignificant 8.6697e-01 insignificant 0.8085106 0.6639273 1.5450e-01 7 0.7808566 0.4875097 2.9335e-01 6.5380e-11 1.0000e+00 weaklyHypermeth 7.9133e-09 1.0000e+00 weaklyHypermeth 1.4369e-06 1.0000e+00 weaklyHypermeth 2.0527e-04 1.0000e+00 weaklyHypermeth 0.20067982 3.8919e-03 weaklyHypermeth 2.1622e-01 insignificant 0.7239819 0.6636403 4.4739e-02 7 0.6731391 0.4526876 0.22045156 2.7327e-03 9.8584e-01 weaklyHypermeth 2.2397e-01 1.0000e+00 insignificant 9.8386e-02 9.9851e-01 insignificant 1.0000000 1.0000e+00 insignificant 1.1490e-01 7.3744e-02 insignificant 5.4891e-01 insignificant chr18 44673750 44674750 52269 KIAA0427 ENSG00000134030 0.601872 286 5 0.756919 105 5 0.705317 34 5 0.7984499 224 5 0.5416667 21 0 0.949830 211 5 0.9166667 26 1 0.8675492 83 5 0.5818543 46 5 0.637879 30 2 0.894649 163 5 1.0000000 3 0 0.82216749 88 4 0.855556 50 4 0.6049383 48 2 1.0000000 3 0 NA 0 0 0.7841577 429 5 0.8436801 148 4 0.932296 184 5 0.825397 56 4 0.614493 53 2 0.872078 95 5 1.0000000 10 0 0.851429 98 5 0.9044996 173 6 0.934063 79 5 0.642857 8 0 0.687739 169 4 0.873902 141 5 0.8038260 168 5 0.9393816 190 5 0.7171717 77 5 0.8816467 193 5 0.7500000 106 7 0.4666667 34 3 0.6246658 56 5 0.8620947 252 5 0.498397 70 5 0.5664529 185 5 0.5301599 140 5 0.4243146 110 5 0.5407011 113 5 0.894173 0.7076539 0.702052 0.8693439 0.635714 0.942635 0.9047619 0.8726893 0.841089 0.654929 0.8773044 0.908473 0.8425757 0.7984127 0.8603175 NA NA 0.7929778 0.8674712 0.932294 0.955556 0.6525880 0.927922 0.9451673 0.8922449 0.8945786 0.932703 0.685714 0.735358 0.8864229 0.8231690 0.9320685 0.8773449 0.8508775 1.0000000 6.0478e-01 0.92299465 0.8524561 0.620696 0.5963401 0.592030 0.4706246 0.6665393 0 0.8667279 0.8967742 -0.02812092 5 0.694093 0.726939 -0.03284570 0.98825273 1.8939e-01 insignificant 1.00000 1.000000 insignificant 0.99288208 2.9344e-01 insignificant 1.00000 1.000000 insignificant -0.03464150 0.48154722 lowCoverage 1.00000 lowCoverage 0.8656854 0.8245125 -0.00092457 5 0.619630 0.6188662 0.0007640 6.7760e-01 9.2839e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9110e-01 2.9152e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0774563 3.1101e-01 lowCoverage 1.0000e+00 lowCoverage 0.8692449 0.5906149 0.25030867 5 0.8363666 0.5400837 0.29628284 5.8981e-19 9.9307e-01 hypermethylated 8.4259e-17 1.0000e+00 hypermethylated 6.6266e-06 9.9764e-01 hypermethylated 3.8980e-04 1.00000000 hypermethylated 0.2824921 1.8886e-06 lowCoverage 6.2952e-04 lowCoverage 0.8969156 0.8312236 0.0217756 5 0.710488 0.6452810 0.06520677 6.5839e-01 9.7558e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7724e-01 8.2616e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.11209785 1.5966e-01 lowCoverage 9.3339e-01 lowCoverage 0.8981407 0.5899514 2.8686e-01 5 0.8956271 0.4743814 4.2125e-01 2.9451e-15 9.9880e-01 hypermethylated 7.3628e-13 1.0000e+00 hypermethylated 1.9287e-05 1.0000e+00 hypermethylated 1.3777e-03 1.0000e+00 hypermethylated 0.31713358 2.4991e-06 lowCoverage 1.2496e-03 lowCoverage 0.8345120 0.5944625 2.7029e-01 5 0.6867898 0.6172386 0.06955125 8.2067e-06 9.9997e-01 hypermethylated 2.0517e-03 1.0000e+00 hypermethylated 3.1355e-03 9.9978e-01 weaklyHypermeth 0.5692438 1.0000e+00 insignificant 2.0504e-01 2.1551e-02 weaklyHypermeth 2.2217e-01 insignificant chr18 44682550 44683550 52271 KIAA0427 ENSG00000134030 0.931155 246 8 0.825960 236 7 0.754557 327 7 0.9586895 97 7 0.7825670 108 5 0.913407 232 8 0.9282863 383 7 0.8110011 222 7 0.8277584 267 7 0.920129 227 7 0.908514 265 7 0.7840881 225 7 0.72680777 248 7 NA 0 0 0.8263903 280 7 0.8842010 173 7 0.7106585 177 7 0.7228650 115 5 0.7730835 205 8 0.845902 277 8 0.841387 62 6 0.798611 49 5 0.843697 317 8 0.9890110 61 6 1.000000 29 4 0.8333715 289 8 0.902252 131 6 0.967320 64 5 0.875191 236 7 0.866082 243 9 0.8127731 291 8 0.9330066 298 8 0.0072445 315 7 0.0027473 263 7 0.2500000 236 8 0.2407407 123 8 0.1360902 136 7 0.2325869 408 9 0.914500 280 9 0.7509853 341 8 0.9049134 133 8 0.7410319 230 7 0.5704341 180 8 0.902155 0.8108682 0.737383 0.9599609 0.759385 0.923082 0.9152961 0.8361818 0.834424 0.890690 0.8926519 0.792279 0.7286355 NA 0.8213647 0.8833145 0.7318555 0.4946141 0.7914848 0.848632 0.815561 0.7710077 0.922696 0.9858774 0.9985468 0.7970132 0.889262 0.963057 0.861077 0.9398676 0.7569239 0.9174690 0.0080082 0.0035306 0.0099290 3.0599e-02 0.10180391 0.0399029 0.873045 0.6487394 0.875512 0.7070557 0.4888137 6 0.8328691 0.8922185 -0.05212551 8 0.854479 0.820336 0.03414249 0.99999765 1.4701e-03 weaklyHypometh 1.00000 0.245012 insignificant 0.99990389 1.9308e-03 weaklyHypometh 1.00000 0.315568 insignificant -0.05508375 0.05079930 insignificant 1.00000 insignificant 0.8327915 0.0918298 0.77252287 8 0.838309 0.2375709 0.6007386 1.0175e-77 9.7913e-01 hypermethylated 7.2676e-76 1.0000e+00 hypermethylated 7.7290e-19 9.9846e-01 hypermethylated 3.6805e-17 1.0000e+00 hypermethylated 0.6885732 5.0347e-06 hypermethylated 1.3985e-04 hypermethylated 0.8327915 0.7431271 0.09290654 8 0.8383095 0.7779056 0.06040390 7.7912e-03 9.3533e-01 weaklyHypermeth 9.7464e-02 1.0000e+00 weaklyHypermeth 2.2164e-02 9.8399e-01 weaklyHypermeth 3.2594e-01 1.00000000 insignificant 0.0571020 4.2732e-01 insignificant 1.0000e+00 insignificant 0.8926499 0.0918298 0.7930827 8 0.911484 0.2375709 0.67391358 7.5072e-75 9.9999e-01 hypermethylated 8.3413e-73 1.0000e+00 hypermethylated 1.0792e-15 1.0000e+00 hypermethylated 4.9054e-14 1.0000000 hypermethylated 0.74365695 2.1923e-06 hypermethylated 6.8508e-05 hypermethylated 0.8926499 0.7431271 1.3753e-01 8 0.9114845 0.7779056 1.3358e-01 1.4016e-07 9.9999e-01 weaklyHypermeth 6.6742e-06 1.0000e+00 weaklyHypermeth 6.1849e-05 9.9997e-01 weaklyHypermeth 2.8113e-03 1.0000e+00 weaklyHypermeth 0.11218572 1.5353e-01 insignificant 1.0000e+00 insignificant 0.0918298 0.7431271 -6.4718e-01 8 0.2375709 0.7779056 -0.54033467 9.9915e-01 4.9708e-31 hypomethylated 1.0000e+00 3.8237e-29 hypomethylated 1.0000e+00 2.8116e-10 hypomethylated 1.0000000 1.4058e-08 hypomethylated -6.3147e-01 5.1050e-05 hypomethylated 3.1906e-03 hypomethylated chr18 44702850 44703850 52272 KIAA0427 ENSG00000134030 0.662304 259 9 0.506870 212 10 0.495006 155 10 0.7570731 263 10 0.7307950 74 7 0.707750 266 10 0.5480575 81 8 0.6714782 220 9 0.4779570 118 9 0.747357 160 9 0.804579 325 10 0.6165584 62 8 0.72796161 185 9 0.695080 87 6 0.7104784 151 9 0.6439394 21 1 0.3250000 31 4 0.3135172 318 10 0.7309584 203 8 0.503181 216 9 0.561147 106 8 0.301360 187 9 0.755852 163 9 0.7691638 106 8 0.763479 113 9 0.7462769 265 10 0.683283 241 10 0.495669 75 6 0.716985 155 9 0.708278 301 10 0.5706533 222 10 0.7844962 398 10 0.0342083 251 9 0.0111160 126 6 0.0000000 226 8 0.0000000 71 7 0.0405124 178 9 0.0353765 297 10 0.313377 260 9 0.4210348 234 7 0.2393579 184 5 0.4540318 227 9 0.2689429 269 9 0.668190 0.6148428 0.581317 0.7194423 0.764223 0.688301 0.6735323 0.7149068 0.660844 0.756311 0.7846614 0.616036 0.6875144 0.6762467 0.6903133 0.6746733 0.4014799 0.3168066 0.6993093 0.508859 0.671065 0.1781338 0.756395 0.8109977 0.7206719 0.8026128 0.689563 0.538963 0.779051 0.7731813 0.5913940 0.7807911 0.0426165 0.0204791 0.0071777 0.0000e+00 0.07511159 0.0412146 0.306203 0.3859411 0.233098 0.4622209 0.2217730 3 0.6349486 0.6878216 -0.04802891 9 0.549188 0.534335 0.01485310 0.94365182 1.4635e-01 insignificant 1.00000 1.000000 insignificant 0.93706780 3.2345e-01 insignificant 1.00000 1.000000 insignificant -0.03592507 0.50197292 insignificant 1.00000 insignificant 0.6345759 0.0313316 0.60268681 9 0.512575 0.0199945 0.4925807 3.0380e-65 1.0000e+00 hypermethylated 1.5190e-63 1.0000e+00 hypermethylated 1.3373e-21 1.0000e+00 hypermethylated 8.7064e-20 1.0000e+00 hypermethylated 0.5985929 1.9838e-14 hypermethylated 2.8340e-12 hypermethylated 0.6367660 0.2768313 0.31440135 9 0.6013251 0.3646658 0.23665925 2.3309e-23 9.9978e-01 hypermethylated 4.6619e-21 1.0000e+00 hypermethylated 2.1844e-12 9.9996e-01 hypermethylated 5.4609e-10 1.00000000 hypermethylated 0.2794463 4.5938e-04 hypermethylated 5.2635e-02 hypermethylated 0.6878216 0.0313589 0.6531514 10 0.534335 0.0214227 0.51291194 1.6818e-47 1.0000e+00 hypermethylated 8.0084e-46 1.0000e+00 hypermethylated 3.9691e-19 1.0000e+00 hypermethylated 3.6082e-17 1.0000000 hypermethylated 0.63451798 6.0354e-09 hypermethylated 4.6426e-07 hypermethylated 0.6897590 0.2768313 3.7122e-01 9 0.6025571 0.3646658 2.3789e-01 8.1046e-17 1.0000e+00 hypermethylated 2.7015e-14 1.0000e+00 hypermethylated 1.0786e-09 9.9999e-01 hypermethylated 2.6965e-07 1.0000e+00 hypermethylated 0.31537134 2.0426e-04 hypermethylated 4.9368e-02 hypermethylated 0.0314136 0.2768313 -2.7181e-01 9 0.0249931 0.3646658 -0.33967270 1.0000e+00 3.7818e-21 hypomethylated 1.0000e+00 1.6443e-19 hypomethylated 1.0000e+00 6.9039e-10 hypomethylated 1.0000000 3.2079e-08 hypomethylated -3.1915e-01 1.3387e-03 weaklyHypometh 3.1054e-02 weaklyHypometh chr18 44790050 44791050 52284 SMAD7 ENSG00000101665 0.792604 265 5 0.660095 82 5 0.711596 75 5 0.8235361 126 5 0.8666667 31 3 0.834852 292 6 0.7390347 69 5 0.8436508 48 4 0.5889805 45 4 0.774621 46 5 0.775000 119 5 0.6515385 49 5 0.79169761 81 5 NA 0 0 0.8282143 86 5 0.5793506 43 5 0.7460432 64 5 0.7980938 113 5 0.8047273 84 5 0.842862 262 6 0.823333 35 3 0.733730 60 5 0.862480 113 5 0.7821970 33 3 0.875000 44 5 0.7025499 89 5 0.865079 48 4 0.609091 32 3 0.821089 68 4 0.726882 136 5 0.8196496 123 5 0.8028281 331 6 0.6325819 77 5 0.7196667 62 5 0.7687500 97 5 0.7930827 70 5 0.6166667 31 3 0.7668731 168 5 0.849754 181 5 0.7605071 220 5 0.7403494 146 5 0.7859624 212 5 0.7819947 184 5 0.745598 0.6228895 0.622386 0.8189785 0.787075 0.761192 0.7253312 0.7742144 0.682041 0.697403 0.7777778 0.686761 0.7170767 NA 0.8087086 0.6007598 0.7650718 0.8081174 0.7884725 0.798659 0.794633 0.6903142 0.838603 0.7794613 0.8299320 0.6567010 0.806284 0.740260 0.811851 0.7059539 0.7663746 0.7838681 0.6520081 0.7340590 0.7218821 7.4147e-01 0.61961451 0.6780201 0.825502 0.7581562 0.720642 0.7718702 0.7725257 3 0.7762626 0.7841727 -0.02249645 5 0.786953 0.801838 -0.01488500 0.80422478 1.5511e-01 insignificant 1.00000 1.000000 insignificant 0.97631563 9.0902e-02 insignificant 1.00000 1.000000 insignificant -0.02463286 0.42078314 lowCoverage 1.00000 lowCoverage 0.7762626 0.7148515 0.05064557 5 0.786953 0.7385669 0.0483865 1.6571e-03 9.5639e-01 weaklyHypermeth 1.0691e-02 1.0000e+00 weaklyHypermeth 1.3275e-02 9.7976e-01 weaklyHypermeth 9.2187e-02 1.0000e+00 weaklyHypermeth 0.0444227 2.5163e-01 lowCoverage 1.0000e+00 lowCoverage 0.7738952 0.8144221 -0.02462916 5 0.7619912 0.7846400 -0.02264885 9.4945e-01 2.3397e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4101e-01 1.0232e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0230207 4.0697e-01 lowCoverage 1.0000e+00 lowCoverage 0.7841727 0.7148515 0.0774474 5 0.801838 0.7385669 0.06327152 6.5181e-04 9.9434e-01 weaklyHypermeth 4.9008e-03 1.0000e+00 weaklyHypermeth 8.8964e-03 9.9923e-01 weaklyHypermeth 6.9503e-02 1.0000000 weaklyHypermeth 0.06905557 9.8945e-02 lowCoverage 6.7309e-01 lowCoverage 0.7817680 0.8144221 3.5298e-03 5 0.7852830 0.7846400 6.4301e-04 5.5081e-01 3.6925e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.5356e-01 3.4106e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00161215 9.5692e-01 lowCoverage 1.0000e+00 lowCoverage 0.7134269 0.8144221 -7.4233e-02 5 0.7196136 0.7846400 -0.06502641 9.7914e-01 1.8359e-04 weaklyHypometh 1.0000e+00 1.9325e-03 weaklyHypometh 9.9487e-01 5.1443e-04 weaklyHypometh 1.0000000 8.0379e-03 weaklyHypometh -6.7443e-02 9.6054e-02 lowCoverage 6.5791e-01 lowCoverage chr18 44800250 44801250 52286 SMAD7 ENSG00000101665 0.821676 213 5 0.790145 157 5 0.803293 162 5 0.8664869 256 5 0.6893939 66 4 0.895381 285 5 0.7711015 114 5 0.7730719 181 5 0.8778788 174 5 0.795165 199 5 0.874152 153 5 0.7645245 131 5 0.80014065 234 5 0.825670 89 5 0.7260343 172 4 0.8713624 94 3 0.6665224 33 3 0.8513448 262 5 0.7767262 103 5 0.807699 206 5 0.748804 87 5 0.855355 126 5 0.817703 140 5 0.9050535 106 5 0.936688 99 5 0.8827357 209 5 0.658796 90 5 0.823785 99 4 0.785371 122 5 0.912198 187 5 0.8432480 165 5 0.8775896 223 5 0.8572992 180 5 0.9157842 78 5 0.9824561 64 3 0.7666667 18 1 0.7409205 134 5 0.7563123 155 5 0.813580 191 5 0.8548451 156 5 0.8542308 134 5 0.7010714 122 5 0.8533579 214 5 0.855838 0.8214374 0.859609 0.9168502 0.759441 0.910261 0.8661982 0.8278773 0.886533 0.902938 0.8638520 0.806013 0.8360387 0.8796782 0.9024197 0.8665240 0.7851748 0.8470501 0.8105888 0.905985 0.953434 0.8580003 0.904093 0.8908001 0.9541425 0.9223951 0.835291 0.779544 0.831848 0.9164749 0.8854025 0.9071766 0.8679973 0.9506924 0.9521597 7.7538e-01 0.91656713 0.8152285 0.867392 0.8557338 0.860917 0.7725989 0.8608017 4 0.8587089 0.8808227 -0.02452491 5 0.784015 0.773949 0.01006623 0.94002644 1.3491e-01 insignificant 1.00000 1.000000 insignificant 0.97573415 5.7900e-02 insignificant 1.00000 1.000000 insignificant -0.03488887 0.20274595 lowCoverage 1.00000 lowCoverage 0.8587089 0.8712242 -0.01323798 5 0.784015 0.7039862 0.0800292 3.7518e-01 6.7545e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 7.4059e-01 5.1996e-03 weaklyHypometh 1.0000e+00 4.2644e-01 insignificant -0.0341847 4.5090e-01 lowCoverage 1.0000e+00 lowCoverage 0.8597617 0.8359853 0.01672470 5 0.8317276 0.8221443 0.00958336 5.5607e-02 5.4192e-01 insignificant 5.3222e-01 1.0000e+00 insignificant 1.3378e-01 4.9782e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0130286 7.0458e-01 lowCoverage 1.0000e+00 lowCoverage 0.8808227 0.8712242 0.0102351 5 0.773949 0.7039862 0.06996301 4.2155e-01 5.0957e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.1179e-01 3.2691e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.00070417 9.8817e-01 lowCoverage 1.0000e+00 lowCoverage 0.8818182 0.8359853 3.7794e-02 5 0.8620724 0.8221443 3.9928e-02 3.3404e-02 9.6320e-01 weaklyHypermeth 3.7532e-01 1.0000e+00 insignificant 3.0442e-02 9.8340e-01 weaklyHypermeth 4.5136e-01 1.0000e+00 insignificant 0.02186031 5.7186e-01 lowCoverage 1.0000e+00 lowCoverage 0.8726115 0.8359853 3.2242e-02 5 0.8447835 0.8221443 0.02263918 9.9739e-02 9.2972e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4784e-02 9.5818e-01 insignificant 1.0000000 1.0000e+00 insignificant 2.1156e-02 6.8214e-01 lowCoverage 1.0000e+00 lowCoverage chr18 49990450 49991450 52335 ENSG00000221058 0.898407 227 8 0.919643 84 6 0.802800 139 8 0.9379630 193 8 0.9153840 65 8 0.882325 206 8 0.7315657 78 6 0.9433639 93 5 0.7998016 46 4 0.749155 86 7 0.930433 184 8 0.8164021 55 6 0.99305556 72 6 NA 0 0 0.7345118 68 7 0.7126894 45 5 0.7037037 39 5 0.8771605 201 8 0.8810096 83 7 0.831520 180 8 0.875000 19 0 0.911516 58 5 0.848502 139 8 0.8222222 30 4 0.928571 28 2 0.9283664 82 6 0.878680 57 5 0.904167 34 4 0.865575 70 5 0.973810 102 8 0.8946647 104 7 0.9120328 238 8 0.8230565 104 6 0.7466009 84 6 0.7330953 183 8 0.6006944 34 3 0.9750000 45 4 0.7760278 122 8 0.882846 250 8 0.9069812 307 8 0.9204962 197 8 0.9568929 251 8 0.9211262 219 8 0.894595 0.8626138 0.892935 0.9283371 0.904003 0.911354 0.9148175 0.9001294 0.834224 0.833918 0.9072208 0.946869 0.9868766 NA 0.8619661 0.8237294 0.8708661 0.8880577 0.8835554 0.907415 0.839127 0.8655937 0.787833 0.8043500 0.8818898 0.9044569 0.894473 0.878497 0.829771 0.9557555 0.8682921 0.8999126 0.8472366 0.7695807 0.7600474 5.8399e-01 0.95275591 0.8723076 0.866333 0.8656651 0.916246 0.9405318 0.8848250 2 0.8908582 0.8990635 -0.00136566 5 0.874534 0.901700 -0.02716636 0.64666436 1.2828e-01 insignificant 1.00000 1.000000 insignificant 0.76725239 8.6608e-03 weaklyHypometh 1.00000 0.626368 insignificant -0.04994868 0.04241077 weaklyHypometh 1.00000 insignificant 0.8908582 0.8199301 0.07577635 6 0.874534 0.7868995 0.0876343 7.0700e-05 9.9242e-01 weaklyHypermeth 5.3158e-04 1.0000e+00 weaklyHypermeth 3.1415e-02 9.1529e-01 weaklyHypermeth 2.0031e-01 1.0000e+00 insignificant 0.0695643 2.4056e-01 insignificant 1.0000e+00 insignificant 0.8908582 0.9223856 -0.01963607 7 0.8745337 0.9192107 -0.04467700 9.0557e-01 9.7839e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 8.5747e-01 1.5456e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0723583 5.8360e-03 weaklyHypometh 1.5903e-01 insignificant 0.8990635 0.8199301 0.0775848 5 0.901700 0.7868995 0.11480064 1.5975e-03 9.9994e-01 weaklyHypermeth 1.1411e-02 1.0000e+00 weaklyHypermeth 1.6212e-02 9.9961e-01 weaklyHypermeth 1.1663e-01 1.0000000 insignificant 0.11951303 6.2591e-02 insignificant 4.6023e-01 insignificant 0.8990635 0.9223856 -8.3647e-03 5 0.9017001 0.9192107 -1.7511e-02 8.7755e-01 3.5908e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.2394e-01 8.0135e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02240960 2.0745e-01 insignificant 1.0000e+00 insignificant 0.8199301 0.9223856 -8.7616e-02 6 0.7868995 0.9192107 -0.13231128 9.9998e-01 1.8223e-04 weaklyHypometh 1.0000e+00 1.9325e-03 weaklyHypometh 9.8508e-01 5.5587e-02 insignificant 1.0000000 3.8872e-01 insignificant -1.4192e-01 3.5717e-02 weaklyHypometh 3.3381e-01 insignificant chr18 53577650 53578650 52396 ENSG00000202159 0.657196 314 9 0.629258 161 9 0.737918 167 9 0.6408404 135 9 0.6923160 92 9 0.725909 311 9 0.6688312 90 9 0.6537407 171 9 0.5940432 110 9 0.723332 137 6 0.734688 245 9 0.6572601 92 6 0.77875824 170 9 0.759091 28 4 0.6965618 159 9 0.4976289 76 6 0.5989469 84 6 0.6628950 162 9 0.6014465 179 9 0.784098 261 9 0.778704 49 4 0.747560 99 7 0.733658 176 9 0.7944444 60 4 0.672436 57 8 0.6730266 173 9 0.595086 74 5 0.750168 47 4 0.722711 114 9 0.764351 203 9 0.7157915 201 9 0.7400755 410 9 0.5992037 113 9 0.7165507 152 9 0.6777115 151 9 0.8225323 72 6 0.6087985 77 6 0.7109397 208 9 0.635886 288 9 0.7154356 239 9 0.7099449 206 9 0.7600012 257 9 0.7016400 299 9 0.829741 0.7189407 0.754314 0.7832479 0.877422 0.799042 0.7299752 0.7987559 0.687180 0.781352 0.7959043 0.734161 0.7875620 0.7191884 0.8025062 0.7479929 0.6748876 0.7708552 0.8273488 0.812773 0.835889 0.8059481 0.772773 0.8580888 0.7308118 0.7921355 0.628885 0.818831 0.758909 0.8449629 0.8089945 0.8036439 0.6494360 0.7598929 0.7138772 8.5366e-01 0.57063177 0.7530621 0.803766 0.8115304 0.804877 0.8464293 0.8256421 4 0.7490458 0.7618761 -0.01268716 9 0.649669 0.660306 -0.01063723 0.83996231 1.7740e-01 insignificant 1.00000 1.000000 insignificant 0.94230097 5.1745e-02 insignificant 1.00000 1.000000 insignificant -0.04926297 0.03691321 weaklyHypometh 1.00000 insignificant 0.7500797 0.7089263 0.04555144 9 0.679999 0.6892754 -0.0092769 1.3691e-02 7.9518e-01 weaklyHypermeth 7.3261e-02 1.0000e+00 weaklyHypermeth 4.9173e-02 9.4013e-01 weaklyHypermeth 2.9622e-01 1.0000e+00 insignificant -0.0145513 7.0603e-01 insignificant 1.0000e+00 insignificant 0.7500797 0.7742436 -0.03433862 9 0.6799985 0.6545447 0.02545380 9.1332e-01 1.1257e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.1372e-01 1.9300e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0298434 2.6976e-01 insignificant 1.0000e+00 insignificant 0.7621915 0.7089263 0.0539737 9 0.673665 0.6892754 -0.01561040 5.2790e-02 9.9908e-01 insignificant 2.6395e-01 1.0000e+00 insignificant 5.3194e-02 9.9945e-01 insignificant 3.2239e-01 1.0000000 insignificant 0.03471163 3.7892e-01 insignificant 1.0000e+00 insignificant 0.7621915 0.7742436 -2.3900e-02 9 0.6736650 0.6545447 1.9120e-02 9.0466e-01 4.1922e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.1572e-01 6.1748e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01941955 4.6452e-01 insignificant 1.0000e+00 insignificant 0.7089263 0.7742436 -8.1059e-02 9 0.6892754 0.6545447 0.03473073 9.9995e-01 2.1423e-02 weaklyHypometh 1.0000e+00 1.3821e-01 insignificant 9.9999e-01 5.3654e-02 insignificant 1.0000000 3.8325e-01 insignificant -1.5292e-02 7.0526e-01 insignificant 1.0000e+00 insignificant chr18 54586050 54587050 52459 ENSG00000214375 0.093632 446 17 0.088349 429 19 0.109705 471 20 0.0819611 522 14 0.1127060 346 19 0.114453 586 18 0.0697965 573 18 0.1068971 352 17 0.1353484 582 19 0.124786 461 14 0.110396 470 20 0.1149248 505 15 0.06538100 517 14 0.094504 222 8 0.0940724 586 14 0.0582036 515 13 0.1036514 359 13 0.2057671 455 12 0.1141668 365 19 0.073044 367 17 0.075203 221 16 0.098415 222 10 0.089788 439 17 0.1036833 215 13 0.073858 303 12 0.0919814 549 21 0.119313 378 17 0.166049 221 14 0.095694 309 17 0.059869 453 20 0.0608185 585 21 0.1776911 458 21 0.0453570 356 17 0.1117820 360 17 0.1475903 348 15 0.0568122 168 15 0.1283693 193 18 0.0145648 415 20 0.074084 603 18 0.1036124 519 17 0.0924043 448 14 0.0689245 397 10 0.0886673 484 17 0.130993 0.0904000 0.113547 0.1041646 0.183978 0.114562 0.1063976 0.1199198 0.108065 0.157427 0.1347398 0.102078 0.0922774 0.0961576 0.1192615 0.1126130 0.0723132 0.1238144 0.1021502 0.112401 0.134762 0.0778553 0.150706 0.1319141 0.0855617 0.1189063 0.147770 0.197993 0.148971 0.0748680 0.0840983 0.1902464 0.0875517 0.0682383 0.0651550 8.7033e-02 0.19759070 0.0311127 0.111331 0.1147865 0.124918 0.1234803 0.1071634 8 0.1091986 0.1171606 -0.00695420 17 0.124820 0.131281 -0.00646048 0.67713390 4.2053e-01 insignificant 1.00000 1.000000 insignificant 0.68634502 7.4164e-01 insignificant 1.00000 1.000000 insignificant 0.00255697 0.84498981 insignificant 1.00000 insignificant 0.1091009 0.0978793 0.04249579 17 0.108168 0.0802941 0.0278740 8.1379e-04 9.0169e-01 weaklyHypermeth 5.4253e-03 1.0000e+00 weaklyHypermeth 7.1848e-03 9.9942e-01 weaklyHypermeth 5.4021e-02 1.0000e+00 weaklyHypermeth 0.0195080 4.2077e-01 insignificant 1.0000e+00 insignificant 0.1088435 0.1003672 0.01584233 17 0.1045200 0.0917503 0.01276964 1.7807e-02 7.0201e-01 weaklyHypermeth 2.0706e-01 1.0000e+00 insignificant 1.0592e-01 4.7131e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0180486 7.5373e-02 insignificant 8.1046e-01 insignificant 0.1173493 0.0975477 0.0417040 17 0.137248 0.0685160 0.06873215 9.6884e-03 9.9053e-01 weaklyHypermeth 5.9438e-02 1.0000e+00 weaklyHypermeth 9.2596e-03 9.9882e-01 weaklyHypermeth 7.1780e-02 1.0000000 weaklyHypermeth 0.01695100 5.0171e-01 insignificant 1.0000e+00 insignificant 0.1169577 0.1003672 2.5010e-02 16 0.0917936 0.0917503 4.3256e-05 4.7754e-02 8.6959e-01 weaklyHypermeth 4.9947e-01 1.0000e+00 insignificant 9.5503e-02 7.6433e-01 insignificant 9.7452e-01 1.0000e+00 insignificant 0.01549166 2.3428e-01 insignificant 1.0000e+00 insignificant 0.0976009 0.1000408 -1.1972e-02 16 0.0717786 0.0723099 -0.00053122 9.4698e-01 4.4228e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9949e-01 2.9665e-01 insignificant 1.0000000 1.0000e+00 insignificant -1.4593e-03 9.5018e-01 insignificant 1.0000e+00 insignificant chr18 54602850 54603850 52460 ENSG00000214375 0.695632 261 7 0.561255 430 8 0.499229 299 10 0.7371398 278 6 0.5304972 218 9 0.718362 438 9 0.3786852 325 8 0.6229188 290 7 0.4961445 288 8 0.487094 249 8 0.600196 380 9 0.3971667 173 7 0.31169818 385 7 0.483507 168 4 0.5887292 369 7 0.4294444 110 6 0.2501347 52 3 0.4269584 280 8 0.3732917 332 8 0.656219 370 10 0.610999 131 8 0.294572 195 8 0.787803 250 8 0.4972983 200 9 0.623806 100 7 0.5349072 462 8 0.464374 352 8 0.373405 235 8 0.492916 410 8 0.547398 596 7 0.6502861 397 8 0.5679054 415 10 0.4728350 346 10 0.5297155 167 7 0.6815447 240 5 0.2583333 46 2 0.5089055 218 8 0.4888136 419 9 0.404538 340 8 0.4598540 323 7 0.5514133 229 5 0.4398423 293 7 0.5852912 281 7 0.649013 0.4310148 0.523253 0.6452414 0.637861 0.717434 0.4383966 0.5652935 0.469867 0.556320 0.7051482 0.336038 0.2732472 0.5732877 0.4985540 0.5073277 0.1127762 0.3828629 0.3909160 0.632918 0.473661 0.1979694 0.836502 0.5549385 0.5674889 0.4753522 0.446705 0.310631 0.482313 0.4656254 0.5955674 0.5200721 0.4461647 0.6300293 0.6542436 4.9560e-01 0.58841214 0.4596671 0.263358 0.3876662 0.401617 0.3678536 0.4736191 6 0.5227392 0.4982634 0.02483205 8 0.547481 0.533064 0.01441782 0.44150415 8.4015e-01 insignificant 1.00000 1.000000 insignificant 0.75736829 5.0380e-01 insignificant 1.00000 1.000000 insignificant -0.02492415 0.60948962 insignificant 1.00000 insignificant 0.5227392 0.5306407 -0.00838249 8 0.547481 0.5198991 0.0275824 1.9078e-02 2.8454e-01 inconclusive 9.5389e-02 1.0000e+00 inconclusive 1.7308e-01 1.7053e-01 insignificant 8.8760e-01 1.0000e+00 insignificant 0.0221906 7.3483e-01 insignificant 1.0000e+00 insignificant 0.5227392 0.3854025 0.14499411 8 0.5474814 0.4986826 0.04879881 7.1586e-05 5.4042e-02 weaklyHypermeth 1.6836e-03 8.3443e-01 weaklyHypermeth 4.2053e-03 1.3218e-01 weaklyHypermeth 8.9475e-02 1.00000000 weaklyHypermeth 0.0240274 6.1043e-01 insignificant 1.0000e+00 insignificant 0.4982634 0.5306407 -0.0338343 8 0.533064 0.5198991 0.01316455 2.2811e-02 2.1015e-01 inconclusive 1.2533e-01 1.0000e+00 insignificant 1.2130e-01 1.9153e-01 insignificant 6.4180e-01 1.0000000 insignificant 0.04711476 4.9819e-01 insignificant 1.0000e+00 insignificant 0.4982634 0.3854025 1.2195e-01 8 0.5330636 0.4986826 3.4381e-02 5.9181e-03 1.5252e-01 weaklyHypermeth 8.9669e-02 1.0000e+00 weaklyHypermeth 3.2979e-02 4.7833e-01 weaklyHypermeth 4.5804e-01 1.0000e+00 insignificant 0.04895154 3.5265e-01 insignificant 1.0000e+00 insignificant 0.5306407 0.3854025 1.4731e-01 8 0.5198991 0.4986826 0.02121644 3.2294e-03 2.5178e-03 weaklyHypermeth 2.3067e-01 2.0808e-02 weaklyHypermeth 1.2624e-02 6.3597e-02 weaklyHypermeth 1.0000000 4.3264e-01 insignificant 1.8368e-03 9.7824e-01 insignificant 1.0000e+00 insignificant chr18 55837950 55838950 52501 ENSG00000210422 0.843651 270 9 0.763606 165 9 0.525231 178 10 0.9101757 224 7 0.7677381 91 8 0.867801 275 7 0.7866048 108 7 0.7538448 146 8 0.8339327 101 9 0.822900 155 10 0.865520 237 10 0.7752747 93 7 0.88844438 148 8 NA 0 0 0.7686491 164 10 0.5846154 61 4 0.7530702 150 8 0.8643452 139 7 0.8344069 139 9 0.819445 357 9 0.764405 77 6 0.858133 94 7 0.754397 166 8 0.6796853 92 10 0.768182 55 6 0.8091521 223 8 0.897338 127 8 0.720000 53 7 0.903924 127 8 0.869781 205 10 0.9031818 194 10 0.8287583 368 9 0.8416118 162 9 0.8471179 175 10 0.8514849 191 10 0.8739216 120 7 0.8221747 86 8 0.8335589 147 10 0.793751 300 7 0.8754704 274 8 0.7845079 211 7 0.8502245 321 7 0.8489095 268 7 0.828681 0.7874504 0.624655 0.8733720 0.796461 0.826785 0.8085602 0.7724708 0.855845 0.803237 0.8523855 0.819400 0.8357082 NA 0.8573101 0.8076923 0.7409425 0.8051554 0.8660651 0.818275 0.782834 0.8545246 0.778794 0.7509911 0.7747578 0.8241901 0.856099 0.710930 0.869174 0.8538641 0.8545404 0.8378426 0.7665297 0.7835703 0.7812287 8.1675e-01 0.75151874 0.7891305 0.866226 0.8542112 0.831113 0.8576706 0.8316781 7 0.8113090 0.8175182 -0.01603115 8 0.791767 0.823830 -0.03206302 0.90523605 1.0841e-01 insignificant 1.00000 1.000000 insignificant 0.82379915 2.7808e-01 insignificant 1.00000 1.000000 insignificant -0.02206460 0.48407347 insignificant 1.00000 insignificant 0.8113090 0.8036322 0.00540842 8 0.791767 0.8455814 -0.0538146 1.4284e-02 5.2951e-03 weaklyHypermeth 7.5576e-02 2.8058e-01 weaklyHypermeth 5.6314e-02 5.4643e-03 inconclusive 3.3322e-01 4.2644e-01 insignificant -0.0539649 3.0236e-02 weaklyHypometh 2.5409e-01 insignificant 0.8113090 0.8697234 -0.04009155 7 0.7917668 0.8344574 -0.04269064 9.9694e-01 9.8444e-03 weaklyHypometh 1.0000e+00 2.9832e-01 insignificant 9.7571e-01 8.4525e-03 weaklyHypometh 1.0000e+00 0.40249959 insignificant -0.0395592 1.7957e-01 insignificant 1.0000e+00 insignificant 0.8175182 0.8036322 0.0249855 8 0.823830 0.8455814 -0.02175161 2.0333e-02 4.2398e-02 weaklyHypermeth 1.1398e-01 1.0000e+00 insignificant 9.8113e-02 3.7283e-02 inconclusive 5.3908e-01 1.0000000 insignificant -0.03190029 1.8921e-01 insignificant 1.0000e+00 insignificant 0.8175182 0.8697234 -2.6818e-02 7 0.8238298 0.8344574 -1.0628e-02 9.0538e-01 1.7346e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.9300e-01 7.1779e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01749456 5.4378e-01 insignificant 1.0000e+00 insignificant 0.8036322 0.8697234 -5.7407e-02 7 0.8455814 0.8344574 0.01112398 2.4420e-01 1.4242e-03 weaklyHypometh 1.0000e+00 1.3118e-02 weaklyHypometh 2.0372e-01 1.2657e-02 weaklyHypometh 1.0000000 1.1720e-01 insignificant 1.4406e-02 4.8134e-01 insignificant 1.0000e+00 insignificant chr18 57424450 57425450 52509 CDH20 ENSG00000101542 0.307672 89 3 0.064935 113 5 0.195531 48 3 0.1555138 79 5 0.0086957 77 3 0.385710 132 3 0.2032164 74 5 0.0871345 65 5 0.1266667 33 3 0.075000 28 3 0.146636 132 5 0.0666667 30 5 0.05555556 18 3 0.333333 24 3 0.3212121 32 3 0.5333333 15 3 NA 0 0 0.2018652 73 3 0.3536415 61 3 0.251204 61 5 0.122222 35 3 0.333333 18 3 0.313834 68 5 0.0571429 32 4 0.056416 212 5 0.0628852 140 5 0.294643 31 3 0.057143 21 3 0.332121 44 5 0.125907 143 5 0.5486111 72 5 0.2478495 96 3 0.0000000 134 5 0.0095238 69 3 0.0000000 73 5 0.0000000 91 5 0.0000000 95 5 0.0000000 125 5 0.101288 139 5 0.0686275 67 5 0.0529915 86 3 0.0777778 57 3 0.1448313 137 5 0.179453 0.1082251 0.214774 0.1925231 0.014493 0.483323 0.0730994 0.1452242 0.211111 0.125000 0.1999488 0.055556 0.0555556 0.3333333 0.3212121 0.5333333 NA 0.2018652 0.1584967 0.275817 0.203704 0.3333333 0.294336 0.0952381 0.0940274 0.1061625 0.089286 0.133333 0.442424 0.1384170 0.6111111 0.3297491 0.0000000 0.0158730 0.0000000 0.0000e+00 0.00000000 0.0000000 0.102147 0.1143791 0.088319 0.1296296 0.2080522 3 0.1900338 0.1929825 -0.00539043 3 0.345770 0.234109 0.11166097 0.99207497 8.1886e-01 lowCoverage 1.00000 1.000000 lowCoverage 0.49074141 5.0546e-01 lowCoverage 1.00000 1.000000 lowCoverage -0.00880613 0.87517677 lowCoverage 1.00000 lowCoverage 0.1893491 0.0017036 0.18731909 3 0.252308 0.0010823 0.2512262 7.7126e-06 1.0000e+00 lowCoverage 6.4271e-05 1.0000e+00 lowCoverage 2.4963e-07 1.0000e+00 lowCoverage 4.3795e-06 1.0000e+00 lowCoverage 0.2022823 5.5717e-06 lowCoverage 1.5059e-04 lowCoverage 0.1874470 0.1213992 0.06850127 3 0.1532319 0.1002690 0.05296288 4.6860e-02 9.8055e-01 lowCoverage 4.6860e-01 1.0000e+00 lowCoverage 3.4123e-02 9.9425e-01 lowCoverage 4.6112e-01 1.00000000 lowCoverage 0.1147664 3.9688e-03 lowCoverage 1.2803e-01 lowCoverage 0.1934066 0.0017036 0.1907789 5 0.267553 0.0010823 0.26647083 2.2646e-04 1.0000e+00 weaklyHypermeth 1.8562e-03 1.0000e+00 weaklyHypermeth 7.8771e-07 1.0000e+00 weaklyHypermeth 1.4066e-05 1.0000000 weaklyHypermeth 0.21108847 6.9205e-04 lowCoverage 1.0486e-02 lowCoverage 0.1913717 0.1213992 7.6674e-02 5 0.1745743 0.1002690 7.4305e-02 5.3875e-02 9.8843e-01 insignificant 5.4975e-01 1.0000e+00 insignificant 2.6433e-02 9.9768e-01 weaklyHypermeth 4.1301e-01 1.0000e+00 insignificant 0.12357251 2.2792e-02 lowCoverage 6.3312e-01 lowCoverage 0.0017094 0.1213992 -1.1683e-01 5 0.0015152 0.1002690 -0.09875384 1.0000e+00 2.0087e-07 weaklyHypometh 1.0000e+00 3.4633e-06 weaklyHypometh 1.0000e+00 5.3469e-05 weaklyHypometh 1.0000000 1.1882e-03 weaklyHypometh -8.7516e-02 5.2011e-03 lowCoverage 7.8805e-02 lowCoverage chr18 58254450 58255450 52516 ENSG00000199867 0.606795 156 8 0.534595 140 8 0.615385 63 8 0.6459936 124 8 0.5833333 54 5 0.585769 173 8 0.5971414 123 8 0.5240385 87 8 0.5238095 40 5 0.604167 72 5 0.588567 131 8 0.5312500 26 0 0.66964286 41 5 0.525000 40 5 0.5875000 38 5 0.5312500 20 0 0.3883224 355 5 0.6641026 92 8 0.5813596 126 8 0.633542 133 5 0.511458 45 6 0.517857 26 3 0.607143 91 8 0.6375000 36 4 0.661153 137 8 0.5797880 126 8 0.543403 51 5 0.687500 24 1 0.642575 119 8 0.622122 111 8 0.5374353 132 8 0.5788560 162 8 0.4375864 126 8 0.2548755 138 8 0.5625000 79 8 0.5242248 144 3 0.3604257 74 8 0.5841009 133 8 0.598369 207 8 0.6017113 118 8 0.5483989 209 8 0.5671875 94 8 0.6804302 188 8 0.517265 0.4619509 0.506325 0.5428395 0.489712 0.489236 0.5162649 0.4286935 0.445679 0.527778 0.4957749 0.394444 0.5640212 0.5864386 0.4988889 0.4759259 0.4721242 0.5241880 0.4813645 0.521123 0.408704 0.4402116 0.501058 0.5288889 0.5913701 0.4742127 0.441667 0.588889 0.571317 0.5352228 0.4366575 0.4695311 0.4078437 0.2662838 0.5055556 4.7448e-01 0.36566084 0.5126381 0.498048 0.4834436 0.475164 0.4900000 0.6155435 0 0.5130606 0.5839623 0.00214173 8 0.589983 0.589358 0.00062458 0.57659163 3.6913e-01 insignificant 1.00000 1.000000 insignificant 0.58364072 6.8451e-01 insignificant 1.00000 1.000000 insignificant -0.01782111 0.42711188 insignificant 1.00000 insignificant 0.5130606 0.4553314 0.08432493 8 0.589983 0.4546508 0.1353321 1.3574e-10 4.7952e-01 weaklyHypermeth 1.6159e-09 1.0000e+00 weaklyHypermeth 4.7757e-03 6.2183e-01 weaklyHypermeth 3.7902e-02 1.0000e+00 weaklyHypermeth 0.1221259 6.7305e-02 insignificant 4.6740e-01 insignificant 0.5130606 0.5796569 -0.02017371 8 0.5899828 0.6049099 -0.01492713 7.6838e-01 1.3587e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.8494e-01 4.8365e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0231413 4.1347e-01 insignificant 1.0000e+00 insignificant 0.5839623 0.4553314 0.1332623 8 0.589358 0.4546508 0.13470748 9.4883e-08 7.6377e-01 weaklyHypermeth 1.0782e-06 1.0000e+00 weaklyHypermeth 5.5218e-03 8.2368e-01 weaklyHypermeth 4.4893e-02 1.0000000 weaklyHypermeth 0.13994702 4.3501e-02 weaklyHypermeth 3.7095e-01 insignificant 0.5839623 0.5796569 -1.4807e-02 8 0.5893582 0.6049099 -1.5552e-02 4.2907e-01 5.4895e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 4.5368e-01 4.9805e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00532018 8.5448e-01 insignificant 1.0000e+00 insignificant 0.4553314 0.5796569 -1.7246e-01 8 0.4546508 0.6049099 -0.15025918 8.8500e-01 1.7729e-04 weaklyHypometh 1.0000e+00 1.9063e-03 weaklyHypometh 8.8843e-01 2.8438e-02 weaklyHypometh 1.0000000 2.3120e-01 insignificant -1.4527e-01 3.9520e-02 weaklyHypometh 3.6257e-01 insignificant chr18 63446450 63447450 52593 DSEL ENSG00000171451 0.688090 339 12 0.631128 241 14 0.433571 131 6 0.7417478 189 8 0.6784054 81 10 0.743567 449 14 0.6799067 136 12 0.7582196 170 9 0.7938820 116 6 0.747646 107 9 0.709432 432 12 0.5577295 93 6 0.69270254 166 12 0.733974 59 2 0.7392769 134 12 0.6661006 82 6 0.4745879 81 5 0.6981789 263 14 0.7976039 251 13 0.813112 372 12 0.841601 77 8 0.690476 82 7 0.710680 177 10 0.4569304 96 9 0.675253 142 9 0.7589856 246 12 0.695617 156 10 0.734127 51 3 0.606003 136 14 0.732001 170 11 0.7613912 174 11 0.6959906 341 12 0.5783285 173 11 0.5836149 161 12 0.6311221 141 12 0.9060939 50 5 0.5457976 144 13 0.7387468 229 12 0.667442 325 12 0.7659137 339 14 0.8520864 241 10 0.6343733 275 6 0.8500943 282 7 0.761965 0.6737941 0.587530 0.7997555 0.700621 0.796229 0.6491051 0.7637816 0.753682 0.797805 0.7704620 0.556994 0.7616150 0.7845870 0.7838742 0.6751019 0.5665259 0.7481145 0.7858629 0.844879 0.834772 0.7416050 0.781787 0.6717373 0.7494848 0.7873925 0.785754 0.854724 0.695784 0.7764785 0.7605657 0.7725017 0.6928065 0.6840446 0.7703975 7.3377e-01 0.66483858 0.8070245 0.746233 0.8481151 0.831877 0.7543972 0.8901509 3 0.7392086 0.7359307 0.00693822 12 0.723312 0.644432 0.07888036 0.12392062 4.4243e-01 insignificant 1.00000 1.000000 insignificant 0.60472805 1.0899e-01 insignificant 1.00000 1.000000 insignificant -0.00764479 0.83012277 insignificant 1.00000 insignificant 0.7390746 0.7015590 0.04555973 12 0.707036 0.6275356 0.0795009 2.4237e-03 9.6062e-01 weaklyHypermeth 1.5340e-02 1.0000e+00 weaklyHypermeth 2.3440e-01 8.8062e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0249925 6.9009e-01 insignificant 1.0000e+00 insignificant 0.7390633 0.8084815 -0.05992877 11 0.7043513 0.7258126 -0.02146130 9.9688e-01 7.8693e-03 weaklyHypometh 1.0000e+00 2.6178e-01 insignificant 9.9995e-01 2.2296e-04 weaklyHypometh 1.0000e+00 0.02787024 weaklyHypometh -0.0650388 2.4343e-01 insignificant 1.0000e+00 insignificant 0.7362995 0.7015590 0.0422217 12 0.647046 0.6275356 0.01950989 2.0403e-02 8.3007e-01 weaklyHypermeth 1.1398e-01 1.0000e+00 insignificant 7.6322e-02 9.7982e-01 insignificant 4.3613e-01 1.0000000 insignificant 0.03263729 6.1388e-01 insignificant 1.0000e+00 insignificant 0.7377584 0.8084815 -5.5244e-02 11 0.6749859 0.7258126 -5.0827e-02 9.9431e-01 4.5866e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9804e-01 1.3865e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.05739402 3.1217e-01 insignificant 1.0000e+00 insignificant 0.7012263 0.8084815 -8.6093e-02 11 0.6042566 0.7258126 -0.12155595 1.0000e+00 1.4299e-03 weaklyHypometh 1.0000e+00 1.3118e-02 weaklyHypometh 1.0000e+00 3.9959e-03 weaklyHypometh 1.0000000 4.8143e-02 weaklyHypometh -9.0031e-02 2.4117e-01 insignificant 1.0000e+00 insignificant chr18 69798450 69799450 52676 ENSG00000210546,ENSG00000222180 0.815138 281 5 0.634731 201 6 0.637509 188 6 0.7199414 215 5 0.6279052 128 6 0.735960 430 5 0.6559216 220 6 0.7924158 187 5 0.5784278 275 5 0.612749 210 5 0.776686 231 6 0.6343225 160 5 0.66964687 184 5 0.866825 106 5 0.6845496 185 5 0.7903226 101 5 0.7047368 85 5 0.7122421 311 5 0.6239388 137 4 0.678565 323 5 0.764372 76 4 0.675408 101 5 0.733346 176 6 0.8069300 107 5 0.761359 79 5 0.7275230 257 5 0.645196 134 6 0.774919 101 5 0.662684 173 5 0.727472 295 6 0.7562038 252 6 0.9008365 354 5 0.4957529 286 6 0.3069872 154 3 0.6666667 62 5 0.6190476 43 3 0.8119555 219 6 0.6376710 286 5 0.760981 346 5 0.6322371 267 6 0.8098309 236 3 0.7545260 299 5 0.8011286 273 6 0.852033 0.7443819 0.703308 0.8005473 0.684892 0.821806 0.7939928 0.8376094 0.772144 0.783088 0.8540582 0.772973 0.7532443 0.9171117 0.8068112 0.8717499 0.7784894 0.7673222 0.7694713 0.807904 0.861436 0.7602855 0.778617 0.8352287 0.8051344 0.8087911 0.707345 0.799264 0.757098 0.8562857 0.8271482 0.9196433 0.5532602 0.4083482 0.7872928 6.6805e-01 0.83486838 0.7099970 0.817624 0.7728441 0.819788 0.8041975 0.8209045 5 0.7462112 0.7681710 -0.03971428 5 0.704036 0.752748 -0.04871138 0.99913447 3.0274e-02 weaklyHypometh 1.00000 0.849925 insignificant 0.99335292 5.4624e-02 insignificant 1.00000 1.000000 insignificant -0.04706070 0.08651878 insignificant 1.00000 insignificant 0.7462722 0.6228571 0.09941334 5 0.746317 0.6748912 0.0714258 1.8422e-07 1.2299e-02 weaklyHypermeth 1.6597e-06 5.0049e-01 weaklyHypermeth 7.7386e-03 2.9474e-01 weaklyHypermeth 5.7751e-02 1.0000e+00 weaklyHypermeth 0.1079465 1.8860e-01 lowCoverage 1.0000e+00 lowCoverage 0.7462722 0.7733990 0.01497726 5 0.7463170 0.7623243 -0.01600732 5.1048e-01 2.8490e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.2954e-01 1.8471e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0541141 1.8112e-01 insignificant 1.0000e+00 insignificant 0.7681710 0.6224976 0.1370207 5 0.752748 0.6207063 0.13204152 4.2228e-07 2.0452e-01 weaklyHypermeth 4.5406e-06 1.0000e+00 weaklyHypermeth 7.9432e-04 4.5445e-01 weaklyHypermeth 7.7118e-03 1.0000000 weaklyHypermeth 0.15500723 7.8776e-02 lowCoverage 5.5088e-01 lowCoverage 0.7681710 0.7732394 5.3283e-02 5 0.7527479 0.7227117 3.0036e-02 6.8778e-02 6.6883e-01 insignificant 6.8097e-01 1.0000e+00 insignificant 1.3749e-01 6.8758e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00705341 8.5580e-01 insignificant 1.0000e+00 insignificant 0.6228571 0.7733990 -1.3587e-01 5 0.6748912 0.7623243 -0.08743315 4.5182e-01 1.3735e-02 weaklyHypometh 1.0000e+00 9.4743e-02 weaklyHypometh 7.6382e-01 9.3978e-02 insignificant 1.0000000 5.7304e-01 insignificant -1.6206e-01 7.3690e-02 lowCoverage 5.4891e-01 lowCoverage chr18 70134550 70135550 52687 ENSG00000206043 0.924269 129 2 0.853454 156 6 0.902116 71 5 0.9876399 135 2 0.9503676 72 5 0.949260 85 2 0.8361111 17 1 0.9504355 127 5 0.9295238 68 4 0.910208 97 5 0.944336 238 6 0.7833333 14 1 0.97534165 141 5 1.000000 4 0 0.9595960 43 4 0.6119048 28 3 0.0000000 7 0 0.9866667 55 2 0.9444383 141 5 0.983045 78 5 0.989583 73 5 0.666667 5 0 0.939815 43 4 0.9523810 31 4 1.000000 8 0 0.9054938 153 5 0.922024 51 6 0.666667 6 0 0.947381 82 5 0.879211 125 5 0.9695903 86 5 0.9792413 77 2 0.9370994 134 6 0.9538133 139 6 1.0000000 41 5 NA 0 0 0.9576923 43 5 0.9457385 168 6 0.902963 52 2 0.9595745 108 5 0.9400000 100 2 1.0000000 4 0 0.9651550 108 2 0.948718 0.9075940 0.908120 0.9885189 0.977093 0.874776 0.6474359 0.9476799 0.775092 0.895298 0.9123671 0.794872 0.9275333 0.9676435 0.9075369 0.3315018 0.0000000 1.0000000 0.9196500 0.976690 0.995192 0.9794454 0.914530 0.9780220 1.0000000 0.9230769 0.903846 0.846154 0.915514 0.9353147 0.9448777 0.9786325 0.9611686 0.9662510 1.0000000 NA 0.88165680 0.9434613 0.937892 0.9518822 0.964103 0.9520731 0.9287749 0 0.9179367 0.9405405 -0.02245158 5 0.934103 0.944119 -0.01001583 0.92674345 2.7766e-01 insignificant 1.00000 1.000000 insignificant 0.94929354 4.8139e-02 weaklyHypometh 1.00000 1.000000 insignificant -0.03240215 0.59309296 lowCoverage 1.00000 lowCoverage 0.9178886 0.9485714 -0.03047858 5 0.923120 0.9509354 -0.0278154 7.7881e-01 1.2018e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.4688e-01 1.5602e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0897663 9.3931e-02 lowCoverage 5.9829e-01 lowCoverage 0.9178886 0.9381720 -0.02290302 2 0.9231199 0.9578890 -0.03476905 9.8195e-01 8.9701e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.6767e-01 6.1315e-02 lowCoverage 1.0000e+00 1.00000000 lowCoverage -0.0844361 1.2155e-01 lowCoverage 1.0000e+00 lowCoverage 0.9404601 0.9485714 -0.0056981 5 0.934805 0.9509354 -0.01613028 4.3322e-01 4.1789e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.8668e-01 6.7836e-01 insignificant 9.2875e-01 1.0000000 insignificant -0.05736419 1.2445e-01 lowCoverage 7.8767e-01 lowCoverage 0.9404601 0.9381720 -5.2251e-03 2 0.9348051 0.9578890 -2.3084e-02 7.1250e-01 4.6427e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.0258e-01 3.6587e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.05203399 1.7872e-01 lowCoverage 1.0000e+00 lowCoverage 0.9485714 0.9381720 -1.5476e-03 2 0.9509354 0.9578890 -0.00695365 8.6300e-01 1.1861e-01 lowCoverage 1.0000e+00 6.0286e-01 lowCoverage 9.6670e-01 3.5772e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage 5.3302e-03 7.9013e-01 lowCoverage 1.0000e+00 lowCoverage chr18 70178750 70179750 52688 ENSG00000206043 0.897701 233 5 0.886575 136 5 0.882540 73 5 0.8852924 263 5 0.7485611 49 5 0.878540 267 5 0.6529202 68 5 0.8402984 176 5 0.7596404 123 5 0.864683 127 5 0.920047 153 5 0.7755747 72 4 0.93610522 160 5 0.847619 74 5 0.9506129 170 5 0.8102757 44 3 0.7333333 17 1 0.9205238 290 5 0.9234211 94 5 0.866491 182 5 0.690476 27 4 0.877314 125 5 0.924284 131 5 0.7900895 65 5 0.880635 52 5 0.9601029 190 5 0.761429 77 5 0.812500 38 2 0.896397 115 5 0.940070 186 5 0.8465426 149 5 0.8849803 201 5 0.7996451 159 5 0.8213853 70 5 0.9185714 295 5 0.9583333 14 2 0.6473804 115 4 0.9245857 143 5 0.791549 265 5 0.8988556 241 5 0.9491772 250 4 0.9343627 204 4 0.9313285 233 5 0.908860 0.8704502 0.893416 0.8834775 0.761849 0.869479 0.7955860 0.8353078 0.764797 0.886389 0.9289318 0.729895 0.9319342 0.8557047 0.9450843 0.8012313 0.7818792 0.9168890 0.9034352 0.867890 0.966443 0.8687652 0.916453 0.9483492 0.9081496 0.9557845 0.931122 0.974832 0.883213 0.9373955 0.8289297 0.8773384 0.7802526 0.8241785 0.8770374 9.2480e-01 0.82074659 0.9286610 0.942031 0.9044224 0.944201 0.9328585 0.9408780 4 0.8765789 0.9084871 -0.03364035 5 0.732180 0.814037 -0.08185723 0.83604801 5.1024e-03 weaklyHypometh 1.00000 0.352197 insignificant 0.80256484 1.2896e-04 weaklyHypometh 1.00000 0.064478 weaklyHypometh -0.00636400 0.82728609 lowCoverage 1.00000 lowCoverage 0.8765789 0.8366834 0.02465663 5 0.732180 0.6993121 0.0328678 1.4747e-02 4.1865e-01 weaklyHypermeth 7.7617e-02 1.0000e+00 weaklyHypermeth 8.4104e-01 3.4985e-02 inconclusive 1.0000e+00 1.0000e+00 insignificant 0.0040541 9.3807e-01 lowCoverage 1.0000e+00 lowCoverage 0.8765789 0.9304275 -0.05530021 5 0.7321798 0.7759227 -0.04374284 9.9961e-01 2.5239e-02 weaklyHypometh 1.0000e+00 5.3699e-01 insignificant 9.9854e-01 6.1263e-03 weaklyHypometh 1.0000e+00 0.30631266 insignificant -0.0520169 1.6304e-01 lowCoverage 1.0000e+00 lowCoverage 0.9084871 0.8366834 0.0564801 5 0.814037 0.6993121 0.11472498 2.8145e-03 8.4851e-01 weaklyHypermeth 1.9410e-02 1.0000e+00 weaklyHypermeth 2.3821e-01 9.7319e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.01041813 8.4728e-01 lowCoverage 1.0000e+00 lowCoverage 0.9084871 0.9304275 -2.2406e-02 5 0.8140371 0.7759227 3.8114e-02 6.9355e-01 1.0280e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.5040e-01 4.3905e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04565292 2.4234e-01 lowCoverage 1.0000e+00 lowCoverage 0.8366834 0.9304275 -1.0022e-01 5 0.6993121 0.7759227 -0.07661059 8.5498e-01 2.7537e-02 weaklyHypometh 1.0000e+00 1.6894e-01 insignificant 9.1216e-01 3.0929e-01 insignificant 1.0000000 1.0000e+00 insignificant -5.6071e-02 3.3781e-01 lowCoverage 1.0000e+00 lowCoverage chr18 72300450 72301450 52709 C18orf62 ENSG00000206026 0.898112 417 9 0.861091 450 11 0.875549 385 11 0.9588738 355 7 0.9327026 254 11 0.913709 453 8 0.9141760 490 11 0.9076293 356 11 0.8861577 466 11 0.948069 383 11 0.906677 409 11 0.9010853 305 11 0.91706624 514 11 0.902564 56 5 0.9027296 325 11 0.8974642 146 10 0.8410060 202 11 0.6869101 462 7 0.9484363 328 11 0.820072 360 9 0.927115 123 10 0.708907 105 5 0.926672 389 11 0.8977506 131 10 0.982197 80 5 0.9405908 508 11 0.792455 177 9 0.887055 139 11 0.929028 516 11 0.921207 470 11 0.9102868 471 11 0.9030384 346 11 0.4175643 542 11 0.0813333 394 11 0.0000000 35 5 0.4386724 68 7 0.1322970 190 10 0.4720610 490 9 0.925230 392 11 0.9196948 373 9 0.9411735 374 8 0.9173209 328 7 0.9141719 426 7 0.889511 0.8372235 0.842861 0.9437891 0.905878 0.909200 0.9111622 0.9226153 0.892398 0.957621 0.9131945 0.899663 0.9126318 0.8980526 0.9103149 0.9186933 0.8586984 0.7903518 0.9483996 0.904093 0.936777 0.8435491 0.921945 0.9037693 0.9682143 0.9353910 0.851428 0.856778 0.923208 0.8922838 0.9257336 0.9028388 0.6097563 0.1022965 0.4348520 6.0962e-01 0.24418901 0.6948808 0.909603 0.9036122 0.910442 0.9081446 0.8904516 6 0.8976234 0.9099855 -0.01266926 11 0.863866 0.923160 -0.05929330 0.98043023 2.1183e-01 insignificant 1.00000 1.000000 insignificant 0.85462250 1.4712e-01 insignificant 1.00000 1.000000 insignificant -0.00285452 0.90997591 insignificant 1.00000 insignificant 0.8978472 0.3327516 0.55313777 11 0.899721 0.3156510 0.5840699 3.0660e-100 1.0000e+00 hypermethylated 3.8325e-98 1.0000e+00 hypermethylated 2.4515e-22 1.0000e+00 hypermethylated 1.8857e-20 1.0000e+00 hypermethylated 0.6340159 5.9299e-04 hypermethylated 9.5643e-03 hypermethylated 0.8976234 0.9001585 -0.00582677 8 0.8638664 0.9381494 -0.07428309 9.7712e-01 1.5599e-02 weaklyHypometh 1.0000e+00 4.2160e-01 insignificant 9.7831e-01 2.0158e-02 weaklyHypometh 1.0000e+00 0.58103371 insignificant -0.0325144 2.9766e-02 weaklyHypometh 4.1341e-01 insignificant 0.9099334 0.3327516 0.5478732 11 0.909189 0.3156510 0.59353772 7.1153e-66 1.0000e+00 hypermethylated 5.4733e-64 1.0000e+00 hypermethylated 2.8242e-18 1.0000e+00 hypermethylated 2.0173e-16 1.0000000 hypermethylated 0.63687046 4.6413e-04 hypermethylated 7.3672e-03 hypermethylated 0.9099855 0.9001585 6.5272e-03 8 0.9231597 0.9381494 -1.4990e-02 8.1336e-01 1.8517e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3464e-01 1.5031e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02965988 1.9630e-01 insignificant 1.0000e+00 insignificant 0.3327516 0.9000529 -4.6081e-01 8 0.3156510 0.9269039 -0.61125292 1.0000e+00 1.1549e-32 hypomethylated 1.0000e+00 9.6240e-31 hypomethylated 1.0000e+00 2.0043e-11 hypomethylated 1.0000000 1.4330e-09 hypomethylated -6.6653e-01 5.3422e-04 hypomethylated 1.4839e-02 hypomethylated chr18 72955150 72956150 52718 MBP ENSG00000197971 0.910269 122 6 0.798148 69 6 0.788889 41 6 0.9449092 136 6 0.9166667 14 0 0.891509 184 6 0.7222222 11 0 0.8007937 106 6 0.5597222 30 3 0.835907 67 6 0.866149 152 6 0.7083333 18 0 0.85726496 143 6 0.701587 88 6 0.6064815 58 6 0.0000000 12 2 NA 0 0 0.7430874 174 6 0.9536464 109 6 0.776349 108 6 0.719949 58 6 0.504998 114 6 0.769444 45 6 0.7344628 65 5 0.561111 53 2 0.8396408 102 6 0.755141 46 6 0.666667 6 0 0.883484 98 6 0.887129 158 6 0.9280303 119 6 0.9540262 177 6 0.3863636 101 6 0.6169935 96 6 0.9952830 214 4 0.7500000 12 0 0.7561050 71 6 0.6164545 124 6 0.697066 58 6 0.7488419 90 6 0.8223226 115 6 0.3857186 126 6 0.7087671 130 6 0.912228 0.7929293 0.784848 0.9425233 0.886364 0.886331 0.6818182 0.7994228 0.552399 0.838526 0.8677845 0.667929 0.8568862 0.7052670 0.6119529 0.5589143 NA 0.7360155 0.9508788 0.766015 0.707782 0.5089664 0.771465 0.7232490 0.5719697 0.8444786 0.752410 0.686391 0.871349 0.8762959 0.9170110 0.9548607 0.3753444 0.5983363 0.8284628 7.6515e-01 0.76060051 0.5659738 0.671070 0.7466877 0.815465 0.3598073 0.7129997 0 0.8185140 0.8146013 0.01029885 6 0.823929 0.813809 0.01011948 0.54227948 8.6450e-01 insignificant 1.00000 1.000000 insignificant 0.51087529 8.5275e-01 insignificant 1.00000 1.000000 insignificant -0.01006297 0.87533718 lowCoverage 1.00000 lowCoverage 0.8185140 0.7378641 0.13104530 6 0.823929 0.6689301 0.1549987 4.3382e-05 9.5115e-01 weaklyHypermeth 3.3892e-04 1.0000e+00 weaklyHypermeth 4.8326e-02 9.0587e-01 weaklyHypermeth 2.9288e-01 1.0000e+00 insignificant 0.0700773 4.8366e-01 lowCoverage 1.0000e+00 lowCoverage 0.8185140 0.6473988 0.17773445 6 0.8239288 0.6467015 0.17722729 2.1591e-07 9.9994e-01 weaklyHypermeth 9.2775e-06 1.0000e+00 weaklyHypermeth 4.9870e-04 9.9822e-01 weaklyHypermeth 1.5447e-02 1.00000000 weaklyHypermeth 0.0844007 3.7386e-01 lowCoverage 1.0000e+00 lowCoverage 0.8146013 0.7378641 0.1097884 6 0.813809 0.6689301 0.14487923 2.8896e-04 9.4916e-01 weaklyHypermeth 2.3303e-03 1.0000e+00 weaklyHypermeth 6.5794e-02 7.6982e-01 insignificant 3.8643e-01 1.0000000 insignificant 0.08014028 4.1047e-01 lowCoverage 1.0000e+00 lowCoverage 0.8146013 0.6473988 1.6970e-01 6 0.8138094 0.6467015 1.6711e-01 6.9423e-04 9.9984e-01 weaklyHypermeth 1.3885e-02 1.0000e+00 weaklyHypermeth 6.9289e-02 9.9733e-01 insignificant 7.6142e-01 1.0000e+00 insignificant 0.09446367 3.0748e-01 insignificant 1.0000e+00 insignificant 0.7378641 0.6473988 7.3712e-02 6 0.6689301 0.6467015 0.02222859 8.4688e-02 5.5601e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.9821e-01 6.6144e-01 insignificant 1.0000000 1.0000e+00 insignificant 1.4323e-02 9.0057e-01 lowCoverage 1.0000e+00 lowCoverage chr18 75265450 75266450 52721 NFATC1 ENSG00000131196 0.867366 282 7 0.740023 115 7 0.751623 93 7 0.8725178 238 7 0.7761905 26 1 0.781129 191 7 0.7496499 110 7 0.7746212 99 7 0.7843973 121 7 0.816543 92 7 0.809195 127 7 0.8843537 69 7 0.83443878 102 7 NA 0 0 0.8268769 106 7 0.8470238 96 7 0.7932900 63 7 0.8569431 268 7 0.8804765 103 7 0.848062 157 7 0.779808 59 4 0.836093 108 7 0.836910 186 7 0.7824176 110 7 0.856045 94 7 0.7904285 117 7 0.631151 97 7 0.812925 73 7 0.876786 80 7 0.863259 113 7 0.8742924 86 7 0.7598851 224 7 0.8505233 103 7 0.8337662 108 7 0.7500000 168 4 0.8563579 69 7 0.8208333 112 7 0.8956044 88 7 0.892851 242 7 0.8214319 218 7 0.7862892 205 7 0.8226921 234 7 0.8684577 263 7 0.859614 0.7237369 0.731314 0.8702336 0.764437 0.764548 0.7270108 0.7711601 0.768515 0.803268 0.7911079 0.881707 0.8329812 NA 0.8298450 0.8341256 0.7751280 0.8544864 0.8870356 0.856051 0.768187 0.8280601 0.820439 0.7435536 0.8645296 0.7757481 0.590679 0.782612 0.875367 0.8590698 0.8639893 0.7425079 0.8478957 0.8201398 0.8137892 8.5891e-01 0.81644660 0.8918382 0.884923 0.8155438 0.778838 0.8171964 0.8628818 7 0.8323841 0.8010393 0.02404562 7 0.820946 0.798929 0.02201728 0.01960264 8.2644e-01 weaklyHypermeth 1.00000 1.000000 insignificant 0.34992917 6.2475e-01 insignificant 1.00000 1.000000 insignificant 0.00717826 0.75308793 insignificant 1.00000 insignificant 0.8323841 0.8256173 -0.01891480 7 0.820946 0.8350408 -0.0140946 9.3829e-02 5.7360e-02 insignificant 4.1888e-01 1.0000e+00 insignificant 4.2458e-01 4.0540e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0190026 4.2312e-01 insignificant 1.0000e+00 insignificant 0.8323841 0.8726334 -0.01545395 7 0.8209462 0.8363568 -0.01541065 9.1580e-01 6.3468e-02 insignificant 1.0000e+00 9.2972e-01 insignificant 9.6518e-01 8.3456e-02 insignificant 1.0000e+00 1.00000000 insignificant -0.0228329 3.2830e-01 insignificant 1.0000e+00 insignificant 0.8010393 0.8256173 -0.0477528 7 0.798929 0.8350408 -0.03611193 2.9205e-01 7.9173e-03 weaklyHypometh 1.0000e+00 7.1975e-01 insignificant 5.9536e-01 2.3197e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant -0.02618086 3.6572e-01 insignificant 1.0000e+00 insignificant 0.8010393 0.8726334 -4.2254e-02 7 0.7989289 0.8363568 -3.7428e-02 8.3855e-01 6.5450e-03 weaklyHypometh 1.0000e+00 3.5583e-01 insignificant 9.1922e-01 2.6461e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.03001112 2.9301e-01 insignificant 1.0000e+00 insignificant 0.8256173 0.8726334 6.4925e-03 7 0.8350408 0.8363568 -0.00131600 6.7211e-01 4.1596e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.3524e-01 5.1899e-01 insignificant 1.0000000 1.0000e+00 insignificant -3.8303e-03 8.9180e-01 insignificant 1.0000e+00 insignificant chr18 75346150 75347150 52723 NFATC1 ENSG00000131196 0.754783 290 11 0.662836 171 10 0.835604 234 12 0.8995611 145 11 0.8403562 124 6 0.888621 314 13 0.8756532 188 11 0.8125183 166 11 0.7656025 170 7 0.948822 147 11 0.891389 174 11 0.7574299 157 10 0.55685547 187 7 NA 0 0 0.7317808 194 11 0.8851852 87 8 0.8526114 100 6 0.5746875 168 10 0.6292123 104 5 0.873587 337 12 0.887347 119 9 0.583297 100 10 0.845475 238 12 0.8136692 102 9 0.908297 99 5 0.8470978 202 13 0.837504 163 11 0.797053 114 11 0.836860 122 6 0.743667 197 8 0.8791725 199 13 0.9207784 399 11 0.0118343 260 13 0.0067935 209 7 0.1250000 98 5 0.0047847 192 11 0.0712492 78 10 0.0000000 287 13 0.714677 227 12 0.7022287 284 11 0.5872446 151 9 0.6963750 268 13 0.7161440 224 11 0.807356 0.7673316 0.784978 0.8742938 0.891534 0.874734 0.8523158 0.8433891 0.855414 0.947624 0.8657104 0.856053 0.7228799 NA 0.7605510 0.8190821 0.8480121 0.5045423 0.8398968 0.878736 0.878333 0.6983018 0.829517 0.8933595 0.8902420 0.8832348 0.879801 0.862103 0.843298 0.8676268 0.8273731 0.9175780 0.0119446 0.0194521 0.1483516 6.0477e-03 0.09488229 0.0000000 0.796103 0.7987496 0.757836 0.7946595 0.7632788 4 0.8209430 0.8505355 -0.03117324 11 0.809780 0.824760 -0.01497968 0.95274246 4.3178e-02 weaklyHypometh 1.00000 0.981318 insignificant 0.97088173 1.2820e-01 insignificant 1.00000 1.000000 insignificant -0.03359220 0.37375999 insignificant 1.00000 insignificant 0.8209430 0.0133452 0.80669779 11 0.809780 0.0109495 0.7988307 1.3483e-115 1.0000e+00 hypermethylated 2.2472e-113 1.0000e+00 hypermethylated 1.7994e-26 1.0000e+00 hypermethylated 1.7994e-24 1.0000e+00 hypermethylated 0.7548158 1.3085e-15 hypermethylated 3.2711e-13 hypermethylated 0.8209430 0.7504333 0.05111142 11 0.8097802 0.7007951 0.10898509 3.8050e-06 8.7568e-01 weaklyHypermeth 1.1891e-04 1.0000e+00 weaklyHypermeth 4.4471e-05 9.8371e-01 weaklyHypermeth 1.9047e-03 1.00000000 weaklyHypermeth 0.1080922 9.0346e-03 weaklyHypermeth 2.0847e-01 insignificant 0.8505355 0.0133452 0.8359379 11 0.824760 0.0109495 0.81381039 2.8441e-97 1.0000e+00 hypermethylated 5.6881e-95 1.0000e+00 hypermethylated 4.6399e-24 1.0000e+00 hypermethylated 4.6399e-22 1.0000000 hypermethylated 0.78840795 1.2042e-13 hypermethylated 4.0140e-11 hypermethylated 0.8505355 0.7504333 8.5495e-02 11 0.8247599 0.7007951 1.2396e-01 2.9532e-06 9.9715e-01 weaklyHypermeth 1.0938e-04 1.0000e+00 weaklyHypermeth 2.6104e-05 9.9806e-01 weaklyHypermeth 1.6315e-03 1.0000e+00 weaklyHypermeth 0.14168440 1.7183e-03 weaklyHypermeth 1.3218e-01 insignificant 0.0133452 0.7504333 -7.3761e-01 11 0.0109495 0.7007951 -0.68984561 1.0000e+00 3.1640e-68 hypomethylated 1.0000e+00 6.3279e-66 hypomethylated 1.0000e+00 6.4996e-16 hypomethylated 1.0000000 9.2851e-14 hypomethylated -6.4672e-01 2.0584e-08 hypomethylated 5.1460e-06 hypomethylated chr18 75368350 75369350 52725 NFATC1 ENSG00000131196 0.735295 355 12 0.631262 232 7 0.754178 162 6 0.5875084 375 13 0.4418556 214 14 0.546788 492 18 0.7013199 262 18 0.6933308 278 10 0.4942842 160 5 0.657090 147 7 0.753507 498 18 0.6937387 112 6 0.65543030 223 6 0.823204 82 4 0.7560878 190 6 0.5000000 40 4 0.7050265 34 2 0.6439862 545 10 0.8876827 470 13 0.773618 383 12 0.763657 125 6 0.876381 108 4 0.592245 227 11 0.6882301 169 6 0.539834 264 13 0.7008860 402 17 0.646947 139 5 0.621496 150 8 0.828262 364 13 0.449487 449 12 0.6515736 387 16 0.9038791 424 17 0.0146707 566 19 0.2928634 375 13 0.0555556 553 18 0.0653979 230 12 0.0646816 282 6 0.2797406 625 18 0.662059 424 17 0.8046218 361 7 0.8839346 304 10 0.6889490 415 10 0.5946508 432 18 0.830140 0.7733299 0.881083 0.7844217 0.669042 0.822228 0.7815838 0.8043951 0.740964 0.848328 0.8245391 0.912107 0.7425782 0.7955751 0.8540941 0.6268478 0.7432580 0.8315974 0.9267075 0.829297 0.795323 0.7740088 0.850696 0.7406720 0.8970582 0.9002616 0.770721 0.753958 0.863471 0.7802951 0.8822712 0.9321223 0.0284274 0.0987522 0.0655738 1.8481e-01 0.04044288 0.2248387 0.795554 0.7886415 0.890783 0.7820585 0.7244008 4 0.7790276 0.7969432 -0.02461822 7 0.663012 0.629385 0.03362713 0.98093122 2.6964e-01 insignificant 1.00000 1.000000 insignificant 0.99830201 6.1337e-02 insignificant 1.00000 1.000000 insignificant -0.01681351 0.72302499 insignificant 1.00000 insignificant 0.7790720 0.1060433 0.65597048 7 0.639621 0.1012230 0.5383977 2.4045e-93 1.0000e+00 hypermethylated 2.6716e-91 1.0000e+00 hypermethylated 1.3761e-26 1.0000e+00 hypermethylated 1.5290e-24 1.0000e+00 hypermethylated 0.5429414 1.4132e-05 hypermethylated 3.6237e-04 hypermethylated 0.7789655 0.7546488 0.01363818 7 0.6488190 0.6619151 -0.01309612 6.3441e-01 7.5659e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8689e-01 1.9418e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0550833 3.7692e-01 insignificant 1.0000e+00 insignificant 0.7973100 0.1060433 0.6773298 10 0.698364 0.1012230 0.59714142 4.4780e-71 1.0000e+00 hypermethylated 4.4780e-69 1.0000e+00 hypermethylated 1.5438e-25 1.0000e+00 hypermethylated 2.2055e-23 1.0000000 hypermethylated 0.55975491 2.6346e-06 hypermethylated 7.9837e-05 hypermethylated 0.7961743 0.7554292 3.9818e-02 10 0.6074554 0.7220893 -1.1463e-01 3.7811e-01 9.5396e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3200e-01 6.1183e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03826982 5.7101e-01 insignificant 1.0000e+00 insignificant 0.1061240 0.7551760 -6.4362e-01 16 0.1113453 0.6942982 -0.58295285 1.0000e+00 1.0635e-53 hypomethylated 1.0000e+00 1.7724e-51 hypomethylated 1.0000e+00 1.3853e-19 hypomethylated 1.0000000 4.6175e-17 hypomethylated -5.9802e-01 1.9171e-05 hypomethylated 1.9171e-03 hypomethylated chr18 75437750 75438750 52729 NFATC1 ENSG00000131196 0.920722 362 10 0.885048 186 7 0.808325 58 5 0.8900315 216 10 0.7950680 38 4 0.855585 325 10 0.8902778 45 5 0.9409008 201 10 0.9132071 88 5 0.912140 95 7 0.928479 222 10 0.9583333 25 4 0.97488040 162 7 0.979167 58 5 0.9203193 64 7 0.8571429 18 1 0.7083333 20 2 0.7410499 582 10 0.9763157 229 10 0.926961 245 9 0.943710 106 8 0.924268 156 8 0.949319 91 4 0.8473077 59 4 0.978514 265 10 0.9665856 288 10 0.770611 144 10 0.933333 17 1 0.906109 168 10 0.952006 291 10 0.8494400 248 9 0.8704038 280 10 0.3715886 163 9 0.4289192 305 10 0.4366213 86 2 0.2915405 224 10 0.5056548 101 7 0.4522355 429 10 0.887778 132 10 0.8197904 304 10 0.8280952 128 9 0.7955357 146 8 0.6129057 209 10 0.906139 0.8537726 0.797464 0.9030374 0.891029 0.881067 0.8108780 0.9145749 0.873893 0.919208 0.9207079 0.951330 0.9473719 0.9277226 0.8828554 0.9451623 0.7450358 0.8420826 0.9590565 0.901730 0.947028 0.9225797 0.889124 0.8742066 0.9888083 0.9423316 0.870593 0.904895 0.939726 0.9377153 0.9695513 0.8855171 0.3651105 0.4330701 0.1595845 3.2450e-01 0.57492507 0.4010505 0.929091 0.8553922 0.824775 0.8773310 0.6489193 3 0.8934527 0.9273849 -0.03405450 9 0.822033 0.853734 -0.03170177 0.99999846 3.2652e-03 weaklyHypometh 1.00000 0.315485 insignificant 0.99021284 2.7751e-01 insignificant 1.00000 1.000000 insignificant -0.01851954 0.45672773 insignificant 1.00000 insignificant 0.8937288 0.3958652 0.50324596 9 0.896763 0.4341551 0.4626078 1.6594e-58 1.0000e+00 hypermethylated 7.2146e-57 1.0000e+00 hypermethylated 3.3275e-18 1.0000e+00 hypermethylated 1.4468e-16 1.0000e+00 hypermethylated 0.4746877 4.8100e-07 hypermethylated 1.5516e-05 hypermethylated 0.8937288 0.7910773 0.09319895 9 0.8967628 0.7930826 0.10368026 1.2169e-06 1.0000e+00 weaklyHypermeth 4.3462e-05 1.0000e+00 weaklyHypermeth 5.1145e-04 9.9999e-01 weaklyHypermeth 1.5447e-02 1.00000000 weaklyHypermeth 0.1002934 9.7398e-02 insignificant 9.3652e-01 insignificant 0.9265751 0.3952599 0.5321894 10 0.800883 0.3673620 0.43352103 3.3425e-49 1.0000e+00 hypermethylated 1.7592e-47 1.0000e+00 hypermethylated 4.3709e-15 1.0000e+00 hypermethylated 1.8212e-13 1.0000000 hypermethylated 0.49320726 3.1622e-07 hypermethylated 1.5058e-05 hypermethylated 0.9273504 0.7910773 1.2542e-01 10 0.8404375 0.7930826 4.7355e-02 6.9412e-11 1.0000e+00 weaklyHypermeth 7.9133e-09 1.0000e+00 weaklyHypermeth 3.5716e-06 1.0000e+00 weaklyHypermeth 3.2564e-04 1.0000e+00 weaklyHypermeth 0.11881293 6.0654e-02 insignificant 8.7854e-01 insignificant 0.3958652 0.7910773 -4.2970e-01 10 0.4341551 0.7930826 -0.35892752 1.0000e+00 8.7817e-15 hypomethylated 1.0000e+00 2.7443e-13 hypomethylated 1.0000e+00 1.2816e-07 hypomethylated 1.0000000 4.1342e-06 hypomethylated -3.7439e-01 2.5238e-04 hypomethylated 9.3473e-03 hypomethylated chr18 75444450 75445450 52730 NFATC1 ENSG00000131196 0.821599 103 4 0.802741 120 7 0.801402 213 9 0.9259259 73 6 0.7862923 206 9 0.758681 98 6 0.8549162 182 9 0.8506534 66 5 0.7441609 88 5 0.917894 119 9 0.911085 247 9 0.8473348 249 9 0.93001933 157 8 NA 0 0 0.9076279 112 9 0.8411239 256 9 0.8455055 241 9 0.7907407 81 3 0.8369388 251 9 0.771031 93 4 0.677293 62 7 0.596429 46 4 0.924167 62 7 0.8150000 57 5 0.778830 48 4 0.9173164 117 7 0.746905 87 8 0.907407 71 9 0.791694 93 7 0.914219 137 7 0.8526082 98 9 0.8976196 127 6 0.2589177 102 7 0.2012869 156 9 0.2805607 209 8 0.3538043 49 5 0.4411072 124 7 0.4883815 125 10 0.960214 118 5 0.8636650 104 6 0.7782557 89 6 0.8572593 109 4 0.8525056 87 6 0.804824 0.7126161 0.825460 0.9628099 0.845508 0.736730 0.8407570 0.8595298 0.749579 0.909668 0.8865026 0.850260 0.8761309 NA 0.8775876 0.8967869 0.8999307 0.7553719 0.8543354 0.823915 0.616411 0.7982089 0.888154 0.8764463 0.8639072 0.8267121 0.816332 0.922406 0.702185 0.8915860 0.8844049 0.9029331 0.2135344 0.0977742 0.4994954 1.5645e-01 0.52494750 0.2654317 0.919916 0.8569935 0.807731 0.7790970 0.8226412 2 0.8456853 0.8666667 -0.01531497 8 0.851197 0.833883 0.01731414 0.79996933 2.1864e-01 insignificant 1.00000 1.000000 insignificant 0.92845718 4.3072e-01 insignificant 1.00000 1.000000 insignificant 0.02095530 0.53729059 insignificant 1.00000 insignificant 0.8456853 0.2993464 0.55786057 7 0.851197 0.3413720 0.5098253 9.4544e-60 1.0000e+00 hypermethylated 4.2975e-58 1.0000e+00 hypermethylated 7.4281e-17 1.0000e+00 hypermethylated 2.7512e-15 1.0000e+00 hypermethylated 0.5019028 4.6565e-05 hypermethylated 1.0583e-03 hypermethylated 0.8456853 0.8461538 0.01240471 4 0.8511973 0.8520730 -0.00087579 6.2579e-01 4.2729e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.2208e-01 1.7257e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage -0.0231340 4.9616e-01 insignificant 1.0000e+00 insignificant 0.8666667 0.2993464 0.5867500 7 0.833883 0.3413720 0.49251116 3.2774e-37 9.9998e-01 hypermethylated 1.3656e-35 1.0000e+00 hypermethylated 1.7905e-14 1.0000e+00 hypermethylated 6.6315e-13 1.0000000 hypermethylated 0.48094752 6.5383e-06 hypermethylated 1.8162e-04 hypermethylated 0.8666667 0.8461538 2.0644e-02 3 0.8338831 0.8520730 -1.8190e-02 6.1975e-01 5.8845e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.0705e-01 3.9482e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.04408929 3.1405e-01 insignificant 1.0000e+00 insignificant 0.2993464 0.8461538 -5.7315e-01 2 0.3413720 0.8520730 -0.51070109 1.0000e+00 1.9602e-18 lowCoverage 1.0000e+00 7.0007e-17 lowCoverage 1.0000e+00 2.0383e-09 lowCoverage 1.0000000 7.5491e-08 lowCoverage -5.2504e-01 8.5650e-06 hypomethylated 9.5167e-04 hypomethylated chr18 75450450 75451450 52731 NFATC1 ENSG00000131196 0.826819 370 9 0.868512 187 9 0.722753 156 7 0.8163033 285 9 0.7816498 74 6 0.925414 295 9 0.7616252 124 7 0.8224206 122 7 0.9322277 141 6 0.784108 116 6 0.853018 168 7 0.6493056 56 6 0.75266328 122 4 0.754545 20 2 0.8645312 93 6 0.8253968 18 1 0.9058824 32 4 0.7779654 235 7 0.9115532 155 7 0.751468 217 7 0.819347 63 5 0.912657 135 6 0.914857 189 7 0.8628072 97 7 0.935983 312 7 0.8483963 179 7 0.881553 108 6 0.665878 60 5 0.857611 178 7 0.780876 238 7 0.9756274 205 7 0.9572572 269 7 0.5607455 235 7 0.4077730 236 7 0.6526527 144 8 0.6510495 248 9 0.4862835 139 8 0.7476550 274 9 0.826931 361 9 0.9091943 268 9 0.8827334 244 7 0.8232438 320 7 0.8592986 338 9 0.877614 0.8899286 0.899166 0.8821459 0.804722 0.926500 0.8506513 0.8196713 0.882100 0.856388 0.8937691 0.821016 0.8222457 0.9227895 0.9587960 0.9236211 0.8892431 0.9040371 0.8724667 0.858620 0.881211 0.8823686 0.948481 0.9397349 0.8651029 0.8621836 0.823422 0.856968 0.915901 0.9242142 0.9493219 0.9420910 0.4954396 0.3081668 0.8772250 8.1774e-01 0.58994897 0.8033630 0.939251 0.9133834 0.894713 0.9048960 0.8889728 4 0.8708810 0.9139203 -0.03412463 7 0.731159 0.768373 -0.03721408 0.99931744 2.0464e-02 weaklyHypometh 1.00000 0.730535 insignificant 0.99930642 2.0387e-01 insignificant 1.00000 1.000000 insignificant -0.05332949 0.08674511 insignificant 1.00000 insignificant 0.8730212 0.6120690 0.25891981 7 0.850207 0.5074478 0.3427590 4.2083e-15 1.0000e+00 hypermethylated 6.3762e-14 1.0000e+00 hypermethylated 2.3255e-06 1.0000e+00 hypermethylated 3.3222e-05 1.0000e+00 hypermethylated 0.2300482 4.8233e-03 weaklyHypermeth 5.5441e-02 weaklyHypermeth 0.8728928 0.9007185 -0.03362032 7 0.8252413 0.8219002 0.00334109 9.4886e-01 2.3983e-02 weaklyHypometh 1.0000e+00 5.3296e-01 insignificant 9.7028e-01 1.3777e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0458722 7.0235e-02 insignificant 7.8039e-01 insignificant 0.9147783 0.6116352 0.2794374 7 0.854769 0.4531335 0.40163531 2.2768e-16 1.0000e+00 hypermethylated 4.0657e-15 1.0000e+00 hypermethylated 1.3143e-07 1.0000e+00 hypermethylated 2.7381e-06 1.0000000 hypermethylated 0.28337771 1.2629e-03 weaklyHypermeth 1.8042e-02 weaklyHypermeth 0.9147783 0.9007185 -1.5372e-03 7 0.8547688 0.8219002 3.2869e-02 7.2380e-01 7.6985e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.0436e-01 8.6634e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00745732 8.0432e-01 insignificant 1.0000e+00 insignificant 0.6116352 0.9007185 -2.8804e-01 9 0.4531335 0.8219002 -0.36876668 1.0000e+00 1.1107e-06 hypomethylated 1.0000e+00 1.6828e-05 hypomethylated 1.0000e+00 1.0062e-04 hypomethylated 1.0000000 1.9729e-03 hypomethylated -2.7592e-01 2.0403e-03 weaklyHypometh 4.0006e-02 weaklyHypometh chr18 75459750 75460750 52732 NFATC1 ENSG00000131196 0.822836 349 10 0.736722 296 7 0.760519 163 8 0.7754924 350 7 0.7411483 132 8 0.751962 455 10 0.6579137 160 7 0.8725454 193 10 0.7750966 196 8 0.895420 183 8 0.808019 368 10 0.6081746 71 7 0.75418318 211 8 0.806978 151 5 0.7049220 208 8 0.4500000 47 6 0.6416667 20 1 0.7810780 530 9 0.8443950 342 10 0.795493 320 10 0.682350 108 7 0.816488 118 7 0.721112 189 8 0.8469841 100 6 0.955444 263 7 0.7718182 229 10 0.849178 205 7 0.849490 105 7 0.800589 335 10 0.697567 281 10 0.8296890 234 7 0.8558654 343 10 0.6308856 271 9 0.5191753 279 9 0.6907001 259 7 0.2666667 81 5 0.5497408 143 8 0.5632624 457 10 0.698465 332 9 0.8005859 319 9 0.7612542 341 8 0.7609841 381 9 0.7128432 200 7 0.946064 0.8959989 0.877202 0.9183286 0.898538 0.912341 0.8279461 0.9656943 0.865163 0.955446 0.8766508 0.870884 0.9428614 0.8781885 0.8747183 0.7348796 NA 0.9174888 0.9323070 0.928128 0.852148 0.9089491 0.902582 0.9750547 0.9548121 0.9025810 0.916213 0.961814 0.937558 0.9154420 0.8724148 0.9388091 0.8214190 0.7830967 0.8892669 4.1519e-01 0.77451312 0.8441736 0.842138 0.8829536 0.835968 0.8661706 0.8552866 5 0.8675105 0.8877347 -0.01926474 8 0.802914 0.697023 0.10589058 0.93617348 2.9175e-01 insignificant 1.00000 1.000000 insignificant 0.99335584 6.5257e-02 insignificant 1.00000 1.000000 insignificant -0.05715314 0.08341989 insignificant 1.00000 insignificant 0.8668072 0.7383995 0.11953286 9 0.756536 0.4451698 0.3113662 1.0994e-14 9.9269e-01 weaklyHypermeth 1.5933e-13 1.0000e+00 weaklyHypermeth 1.8957e-05 1.0000e+00 weaklyHypermeth 2.3404e-04 1.0000e+00 weaklyHypermeth 0.2124897 1.3989e-02 weaklyHypermeth 1.2953e-01 insignificant 0.8677372 0.8499682 0.05930049 9 0.7968302 0.7313812 0.06544894 1.0211e-05 9.1475e-01 weaklyHypermeth 3.0033e-04 1.0000e+00 weaklyHypermeth 2.1412e-04 9.9972e-01 weaklyHypermeth 7.3836e-03 1.00000000 weaklyHypermeth 0.0024017 9.3532e-01 insignificant 1.0000e+00 insignificant 0.8880032 0.7390720 0.1686755 7 0.720329 0.5220929 0.19823648 4.1573e-13 9.9972e-01 weaklyHypermeth 6.4957e-12 1.0000e+00 weaklyHypermeth 8.5141e-06 1.0000e+00 weaklyHypermeth 1.2708e-04 1.0000000 weaklyHypermeth 0.26964285 4.6546e-03 weaklyHypermeth 5.7464e-02 weaklyHypermeth 0.8894674 0.8499682 7.8482e-02 7 0.8164281 0.7313812 8.5047e-02 5.4491e-06 9.9552e-01 weaklyHypermeth 1.9461e-04 1.0000e+00 weaklyHypermeth 3.1244e-06 9.9999e-01 weaklyHypermeth 3.2564e-04 1.0000e+00 weaklyHypermeth 0.05955480 5.9817e-02 insignificant 8.7854e-01 insignificant 0.7403911 0.8499682 -6.2094e-02 9 0.5787207 0.7313812 -0.15266052 9.7714e-01 2.2816e-04 weaklyHypometh 1.0000e+00 2.3767e-03 weaklyHypometh 9.8818e-01 6.2457e-03 weaklyHypometh 1.0000000 6.8634e-02 weaklyHypometh -2.1009e-01 1.5380e-02 weaklyHypometh 1.7678e-01 insignificant chr18 75471550 75472550 52733 NFATC1 ENSG00000131196 0.833040 722 15 0.798197 620 17 0.751349 363 14 0.7659794 516 18 0.7475042 179 13 0.749267 652 17 0.7079152 318 14 0.7940785 466 14 0.8169824 337 14 0.707392 337 14 0.833013 555 17 0.6445640 159 13 0.79523248 448 14 0.803986 96 5 0.7254392 432 16 0.7415584 59 10 0.6755376 109 7 0.7176408 797 18 0.7726322 446 14 0.762894 491 17 0.684778 170 14 0.703465 173 11 0.758973 289 14 0.7450978 147 12 0.751581 208 12 0.8581708 786 18 0.747058 225 12 0.652139 102 9 0.768207 579 14 0.874951 880 15 0.8400018 964 17 0.8870485 801 18 0.8111545 566 17 0.8626113 674 17 0.8031259 600 14 0.6580331 326 11 0.5730981 257 13 0.8089199 940 18 0.816525 550 18 0.7416915 722 18 0.7863058 508 18 0.6301579 710 14 0.8207016 739 18 0.850595 0.7869225 0.787217 0.8075830 0.725958 0.802506 0.8282783 0.8535865 0.809237 0.857150 0.8775790 0.716524 0.8900287 0.8281377 0.8182141 0.7276930 0.7490607 0.7874927 0.8654750 0.807315 0.910499 0.6967257 0.807192 0.8837533 0.8332546 0.9023935 0.831108 0.747260 0.856366 0.8865582 0.8764049 0.8745679 0.8917813 0.8777680 0.9108682 8.5219e-01 0.76276996 0.8214819 0.844440 0.8699361 0.857906 0.7293491 0.8164520 11 0.8004938 0.8658514 -0.05142290 14 0.668181 0.670722 -0.00254089 0.99990925 2.8410e-04 weaklyHypometh 1.00000 0.090305 weaklyHypometh 0.99981616 6.7611e-03 weaklyHypometh 1.00000 0.614646 insignificant -0.01541249 0.54369997 insignificant 1.00000 insignificant 0.8004938 0.8342262 -0.04439390 14 0.668181 0.6804306 -0.0122492 9.2637e-01 4.8956e-04 weaklyHypometh 1.0000e+00 4.7584e-02 weaklyHypometh 9.9953e-01 1.7815e-02 weaklyHypometh 1.0000e+00 8.9075e-01 insignificant 0.0043863 9.2890e-01 insignificant 1.0000e+00 insignificant 0.8008406 0.8197026 -0.01384340 14 0.6868892 0.7173170 -0.03042775 9.6929e-01 8.4985e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9642e-01 1.8193e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0018663 9.6176e-01 insignificant 1.0000e+00 insignificant 0.8659270 0.8339780 0.0139208 14 0.698500 0.6804306 0.01806947 3.7090e-01 4.4934e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.8258e-01 6.4592e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.01979878 7.0704e-01 insignificant 1.0000e+00 insignificant 0.8668427 0.8194487 3.6606e-02 14 0.6853801 0.6886243 -3.2442e-03 1.4387e-01 9.6352e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.1134e-01 9.7261e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01354618 7.5350e-01 insignificant 1.0000e+00 insignificant 0.8364723 0.8199566 2.1250e-02 15 0.7407953 0.7485047 -0.00770936 2.4032e-01 8.2697e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.8843e-01 9.7514e-01 insignificant 1.0000000 1.0000e+00 insignificant -6.2526e-03 9.1600e-01 insignificant 1.0000e+00 insignificant chr18 75645950 75646950 52734 CTDP1 ENSG00000060069 0.772795 104 6 0.808979 252 8 0.567310 164 10 0.8773400 75 4 0.8081381 329 11 0.750705 121 8 0.7968964 471 12 0.8346645 185 8 0.8731958 178 6 0.902537 375 13 0.789264 350 13 0.8225768 227 12 0.50761043 290 13 0.774198 112 8 0.7132309 303 12 0.8541366 64 5 0.7392233 160 5 0.8068582 77 4 0.9088315 153 7 0.883497 275 13 0.828231 82 8 0.891730 34 2 0.775180 309 13 0.8531287 92 9 0.714474 54 4 0.9293213 193 8 0.557887 96 7 0.719947 75 6 0.778186 101 8 0.662910 368 13 0.8139438 239 8 0.8325931 132 8 0.4330586 285 13 0.5350528 128 8 0.6383908 200 7 0.8523810 25 3 0.4233141 265 13 0.7349704 172 8 0.669375 61 3 0.8219607 120 8 0.8075920 82 4 0.8962963 21 1 0.5396825 73 4 0.861907 0.8031226 0.802145 0.8324897 0.836073 0.853064 0.7748259 0.8701093 0.848003 0.922467 0.9005628 0.790736 0.5376744 0.8726738 0.8392365 0.7655624 0.8532867 0.8365651 0.9571236 0.863098 0.910773 0.8348741 0.866186 0.9172689 0.8459122 0.9133702 0.802110 0.886924 0.896185 0.7312510 0.8401281 0.8371001 0.5268820 0.6230691 0.6856948 7.9604e-01 0.73132396 0.8955094 0.845322 0.8968448 0.744003 0.8481848 0.7834022 1 0.8101950 0.8041761 0.00743348 13 0.755948 0.649056 0.10689280 0.55486288 7.1476e-01 insignificant 1.00000 1.000000 insignificant 0.93353550 2.2802e-01 insignificant 1.00000 1.000000 insignificant 0.00980499 0.79634702 insignificant 1.00000 insignificant 0.8103286 0.6039143 0.20135244 13 0.755948 0.4464316 0.3095169 5.8072e-13 1.0000e+00 hypermethylated 7.6411e-12 1.0000e+00 hypermethylated 5.1079e-05 1.0000e+00 hypermethylated 5.8711e-04 1.0000e+00 hypermethylated 0.1867380 4.3481e-02 weaklyHypermeth 3.3447e-01 insignificant 0.8206670 0.8291317 -0.00158217 4 0.8140980 0.6686056 0.14549241 1.2460e-01 4.0880e-01 lowCoverage 9.8109e-01 1.0000e+00 lowCoverage 4.6314e-01 7.2582e-02 lowCoverage 1.0000e+00 1.00000000 lowCoverage 0.0426180 5.5486e-01 lowCoverage 1.0000e+00 lowCoverage 0.8046302 0.6050420 0.1906560 13 0.689622 0.4743335 0.21528809 9.1895e-09 9.9998e-01 weaklyHypermeth 1.0940e-07 1.0000e+00 weaklyHypermeth 4.1404e-05 9.9995e-01 weaklyHypermeth 5.4479e-04 1.0000000 weaklyHypermeth 0.17693304 5.3405e-02 insignificant 4.3347e-01 insignificant 0.8226633 0.8338028 1.1276e-02 4 0.7794033 0.7293879 5.0015e-02 1.4146e-01 2.2345e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 6.1919e-01 1.1134e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.03281300 6.5677e-01 lowCoverage 1.0000e+00 lowCoverage 0.6462366 0.8291317 -1.4981e-01 4 0.5169455 0.6686056 -0.15166010 9.7076e-01 2.4773e-03 lowCoverage 1.0000e+00 2.0644e-02 lowCoverage 9.9997e-01 7.9223e-03 lowCoverage 1.0000000 8.1308e-02 lowCoverage -1.4412e-01 1.6132e-01 lowCoverage 9.7179e-01 lowCoverage chr19 475950 476950 52743 C19orf20 ENSG00000141933 0.736428 802 18 0.772025 471 18 0.761954 535 18 0.8124561 394 15 0.8251079 511 18 0.835308 888 18 0.7479533 1115 18 0.7531749 330 17 0.7217456 397 18 0.878253 508 18 0.793797 1058 19 0.8453338 382 18 0.66557748 697 18 0.708499 164 4 0.7844486 759 18 0.7955988 137 14 0.8580540 215 12 0.8427460 606 17 0.7977726 643 18 0.689823 816 18 0.896013 291 13 0.704942 269 13 0.716141 626 18 0.6837684 373 18 0.834700 337 11 0.8240343 464 18 0.676290 690 18 0.775443 423 17 0.746489 537 18 0.750287 555 19 0.7604834 586 18 0.8536058 1171 18 0.7058286 397 18 0.6933722 649 17 0.7722818 399 10 0.8459635 518 18 0.6306137 345 19 0.8479938 519 18 0.698454 893 18 0.8764186 806 17 0.6537244 529 17 0.7268896 758 18 0.8676264 513 18 0.763138 0.7541503 0.767145 0.7941087 0.806879 0.841719 0.7552960 0.7408312 0.758449 0.849236 0.8129260 0.825417 0.6724458 NA 0.7747996 0.8021773 0.8306474 0.8359920 0.8252559 0.698361 0.892896 0.7084896 0.765235 0.7350737 0.8066293 0.8061386 0.779734 0.839287 0.754337 0.7413858 0.8249174 0.8392619 0.6706940 0.7338739 0.7263450 8.0138e-01 0.70969851 0.8391197 0.718534 0.8586437 0.676421 0.7449052 0.8522611 12 0.8094363 0.7905063 0.00190378 18 0.735313 0.716809 0.01850433 0.72232963 9.7361e-01 insignificant 1.00000 1.000000 insignificant 0.92009045 8.1716e-01 insignificant 1.00000 1.000000 insignificant 0.01278643 0.60188659 insignificant 1.00000 insignificant 0.8095071 0.7313274 0.04777096 18 0.768736 0.6756903 0.0930461 1.1957e-04 7.5139e-01 weaklyHypermeth 8.6642e-04 1.0000e+00 weaklyHypermeth 9.2289e-02 6.2302e-01 insignificant 5.0989e-01 1.0000e+00 insignificant 0.0319605 4.3322e-01 insignificant 1.0000e+00 insignificant 0.8096409 0.7279223 0.00550788 18 0.7623605 0.7641518 -0.00179131 7.8561e-01 9.1874e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 8.4908e-01 2.0941e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0166801 7.3929e-01 insignificant 1.0000e+00 insignificant 0.7907566 0.7313274 0.0519314 18 0.749391 0.6756903 0.07370065 5.7771e-03 6.0017e-01 weaklyHypermeth 3.7272e-02 1.0000e+00 weaklyHypermeth 8.2895e-02 8.2152e-01 insignificant 4.6570e-01 1.0000000 insignificant 0.01917408 6.5406e-01 insignificant 1.0000e+00 insignificant 0.7912228 0.7279223 9.2613e-03 18 0.7642071 0.7641518 5.5225e-05 8.2633e-01 2.2072e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.8423e-01 5.4498e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00389368 9.4027e-01 insignificant 1.0000e+00 insignificant 0.7318117 0.7279223 -5.5850e-02 18 0.7390346 0.7641518 -0.02511725 8.1322e-01 4.2035e-02 weaklyHypometh 1.0000e+00 2.4873e-01 insignificant 8.4020e-01 2.1039e-01 insignificant 1.0000000 1.0000e+00 insignificant -1.5280e-02 7.9844e-01 insignificant 1.0000e+00 insignificant chr19 502050 503050 52744 GZMM ENSG00000197540 0.686502 239 6 0.389755 294 6 0.500000 216 6 0.4878027 330 6 0.3424688 184 6 0.782422 564 6 0.4709402 288 6 0.5308122 176 6 0.5003249 154 6 0.582692 276 6 0.669818 321 6 0.8093682 106 6 0.27673611 175 6 0.484788 144 6 0.5534980 265 6 0.9065657 208 10 NA 0 0 0.6818067 375 6 0.2453257 640 6 0.254880 485 6 0.735450 44 6 NA 0 0 0.746942 102 6 0.5719246 50 6 0.750000 15 0 0.6704799 433 6 0.738861 210 6 0.642995 73 6 0.785055 687 6 0.240607 679 6 0.3875264 386 6 0.8568803 402 6 0.4293942 193 6 0.1933543 157 6 0.1474528 346 6 NA 0 0 0.1355049 220 6 0.2835916 517 6 0.595830 272 6 0.4441043 371 6 0.2303027 246 6 0.3285378 418 6 0.7201617 230 6 0.681355 0.3566592 0.501761 0.4774184 0.451350 0.871828 0.4718342 0.5303987 0.493906 0.752479 0.6660005 0.807322 0.2832386 0.6575544 0.5500461 0.9785736 NA 0.6742068 0.2438659 0.251776 0.740260 NA 0.745418 0.5771254 0.9659091 0.6197763 0.743132 0.746773 0.780170 0.2813710 0.4551929 0.8544915 0.4421121 0.2330725 0.1212554 NA 0.19647191 0.2863948 0.613424 0.5146986 0.223469 0.3308516 0.7132658 6 0.5342920 0.6072704 -0.07329803 6 0.544040 0.478600 0.06543913 0.99055405 3.0670e-01 insignificant 1.00000 1.000000 insignificant 0.99828127 2.5080e-02 weaklyHypometh 1.00000 1.000000 insignificant -0.11333070 0.12168513 insignificant 1.00000 insignificant 0.5338623 0.2372645 0.29819537 6 0.498444 0.1453405 0.3531030 1.5494e-07 1.0000e+00 hypermethylated 1.4214e-06 1.0000e+00 hypermethylated 2.1299e-06 1.0000e+00 hypermethylated 3.1005e-05 1.0000e+00 hypermethylated 0.2966935 1.7440e-03 weaklyHypermeth 2.4564e-02 weaklyHypermeth 0.5334942 0.4710475 0.06091076 6 0.4603616 0.4466384 0.01372314 3.1373e-01 9.0043e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.7214e-01 9.6604e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0707657 4.9886e-01 insignificant 1.0000e+00 insignificant 0.6076648 0.2372645 0.3705907 6 0.526461 0.1453405 0.38111999 6.7785e-07 1.0000e+00 hypermethylated 7.1352e-06 1.0000e+00 hypermethylated 5.4078e-07 1.0000e+00 hypermethylated 1.0014e-05 1.0000000 hypermethylated 0.41002416 2.2061e-04 hypermethylated 4.0854e-03 hypermethylated 0.6078750 0.4710475 1.3720e-01 6 0.5139912 0.4466384 6.7353e-02 4.8284e-02 9.6374e-01 weaklyHypermeth 4.9947e-01 1.0000e+00 insignificant 1.5909e-03 9.9845e-01 weaklyHypermeth 4.2996e-02 1.0000e+00 weaklyHypermeth 0.18409642 1.1931e-01 insignificant 1.0000e+00 insignificant 0.2377622 0.4710475 -2.3693e-01 6 0.2076293 0.4466384 -0.23900909 9.9978e-01 5.6027e-04 hypomethylated 1.0000e+00 5.7170e-03 hypomethylated 1.0000e+00 3.9234e-03 weaklyHypometh 1.0000000 4.7846e-02 weaklyHypometh -2.2593e-01 6.8099e-02 insignificant 5.3202e-01 insignificant chr19 507250 508250 52745 GZMM ENSG00000197540 0.764044 509 9 0.724857 345 9 0.657074 348 10 0.7425634 512 9 0.7946472 123 9 0.898007 461 9 0.6953381 351 9 0.8537134 264 9 0.8334515 330 9 0.886255 249 9 0.878294 313 10 0.7815298 263 9 0.73968936 400 9 NA 0 0 0.8272113 320 9 0.8087572 169 9 0.7530702 167 9 0.8261231 564 9 0.7948673 256 9 0.774106 386 9 0.811777 146 9 0.748536 210 9 0.846973 370 9 0.7370288 188 9 0.852583 161 9 0.8428807 513 9 0.814548 215 9 0.868706 120 9 0.736766 299 9 0.712777 431 9 0.7883274 428 10 0.9073355 520 10 0.5492981 341 9 0.5265236 277 9 0.7191169 396 8 0.5263689 196 9 0.6873376 188 9 0.5156332 450 9 0.707806 489 9 0.8636984 613 9 0.8153841 452 9 0.7601504 596 9 0.8155348 562 9 0.836496 0.7672493 0.642468 0.8269150 0.734834 0.889573 0.7753701 0.8406078 0.813678 0.879057 0.8879328 0.800353 0.7059613 NA 0.7854931 0.8055645 0.7019831 0.7794333 0.7922028 0.787262 0.896358 0.7059241 0.832729 0.7763004 0.8372732 0.8237371 0.801380 0.852531 0.808445 0.7728920 0.8071828 0.8956592 0.5658223 0.3803400 0.5850572 4.8112e-01 0.69764942 0.4363579 0.770434 0.8164103 0.775566 0.7305790 0.8007537 9 0.8015798 0.8281033 -0.02610903 9 0.792194 0.807409 -0.01521549 0.96841642 4.8591e-02 weaklyHypometh 1.00000 1.000000 insignificant 0.96214116 8.1018e-02 insignificant 1.00000 1.000000 insignificant -0.01444444 0.53803032 insignificant 1.00000 insignificant 0.8015798 0.5378788 0.26964325 9 0.792194 0.6009492 0.1912444 2.8283e-23 9.9833e-01 hypermethylated 5.6566e-22 1.0000e+00 hypermethylated 2.0578e-10 9.9938e-01 hypermethylated 5.0191e-09 1.0000e+00 hypermethylated 0.2038624 1.6143e-03 weaklyHypermeth 2.3061e-02 weaklyHypermeth 0.8015798 0.7912979 0.01746584 9 0.7921935 0.7864041 0.00578946 2.2219e-01 3.8791e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.0045e-01 2.6582e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0012727 9.6807e-01 insignificant 1.0000e+00 insignificant 0.8281033 0.5378788 0.2933271 9 0.807409 0.6009492 0.20645985 5.5972e-19 9.9935e-01 hypermethylated 1.1423e-17 1.0000e+00 hypermethylated 6.6138e-11 9.9996e-01 hypermethylated 1.9452e-09 1.0000000 hypermethylated 0.21830680 9.4931e-04 hypermethylated 1.3758e-02 hypermethylated 0.8281033 0.7912979 4.1236e-02 9 0.8074090 0.7864041 2.1005e-02 3.5169e-02 6.7814e-01 weaklyHypermeth 3.9077e-01 1.0000e+00 insignificant 6.1696e-02 7.1471e-01 insignificant 7.1740e-01 1.0000e+00 insignificant 0.01317171 6.9273e-01 insignificant 1.0000e+00 insignificant 0.5378788 0.7912979 -2.4860e-01 9 0.6009492 0.7864041 -0.18545489 9.9995e-01 1.8821e-09 hypomethylated 1.0000e+00 4.1824e-08 hypomethylated 9.9983e-01 2.1505e-06 hypomethylated 1.0000000 5.9175e-05 hypomethylated -2.0514e-01 1.6984e-03 weaklyHypometh 3.4661e-02 weaklyHypometh chr19 560450 561450 52746 HCN2 ENSG00000099822 0.935380 471 12 0.824066 219 11 0.722235 147 10 0.9454978 560 12 0.8063492 89 9 0.903584 558 13 0.7399469 119 6 0.9291885 200 12 0.7312288 156 12 0.844148 153 10 0.883854 247 12 0.8494898 39 3 0.74298031 126 9 0.934145 178 10 0.9012720 199 10 0.7666667 21 3 0.9000000 6 0 0.9469613 1382 12 0.7647639 345 11 0.913099 355 10 0.743466 85 10 0.905132 173 11 0.884905 213 12 0.9227273 90 9 0.898802 261 11 0.8382719 377 12 0.743848 238 11 0.675523 113 10 0.848702 419 12 0.769565 365 12 0.8393875 341 11 0.9340241 444 12 0.6927399 185 10 0.5658791 311 12 0.5561106 117 9 0.7343566 72 9 0.7075849 209 12 0.7758215 415 12 0.924678 185 10 0.8635574 419 13 0.9078579 269 11 0.9162457 467 12 0.9329321 342 12 0.925544 0.8450493 0.762936 0.9287876 0.922001 0.931466 0.7979842 0.8891031 0.846157 0.911470 0.9037543 0.909671 0.7357827 0.9348857 0.9105233 0.8047340 0.8850407 0.9174984 0.7958634 0.939174 0.856943 0.9046095 0.901408 0.9615702 0.9232438 0.9199807 0.900441 0.920315 0.891797 0.7709358 0.8141580 0.9184928 0.5113202 0.4354791 0.5473806 8.4462e-01 0.79545397 0.7442710 0.923285 0.9211970 0.892655 0.9095941 0.9309379 8 0.8974681 0.8778455 0.01289448 11 0.863408 0.823632 0.03977597 0.24371376 9.8067e-01 insignificant 1.00000 1.000000 insignificant 0.11091858 6.1996e-01 insignificant 1.00000 1.000000 insignificant 0.01554659 0.60861808 insignificant 1.00000 insignificant 0.8974681 0.6501146 0.24529588 11 0.863408 0.7055890 0.1578191 3.0806e-15 9.9996e-01 hypermethylated 4.7394e-14 1.0000e+00 hypermethylated 3.4964e-04 9.9960e-01 hypermethylated 3.5614e-03 1.0000e+00 hypermethylated 0.1771607 2.9805e-03 weaklyHypermeth 3.5482e-02 weaklyHypermeth 0.8979740 0.9292509 -0.02946129 11 0.8558775 0.8637799 -0.00790242 9.9384e-01 4.1164e-03 weaklyHypometh 1.0000e+00 1.7152e-01 insignificant 9.3720e-01 3.7887e-02 weaklyHypometh 1.0000e+00 0.80610887 insignificant -0.0598114 1.2060e-02 weaklyHypometh 2.5591e-01 insignificant 0.8778455 0.6501146 0.2284030 11 0.823632 0.7055890 0.11804310 1.6166e-08 9.9942e-01 hypermethylated 1.8798e-07 1.0000e+00 hypermethylated 1.1151e-03 9.9733e-01 weaklyHypermeth 1.0396e-02 1.0000000 weaklyHypermeth 0.16161410 4.8742e-03 weaklyHypermeth 5.8725e-02 weaklyHypermeth 0.8795997 0.9292509 -4.3848e-02 11 0.8509650 0.8637799 -1.2815e-02 9.9872e-01 7.6618e-04 weaklyHypometh 1.0000e+00 7.6618e-02 weaklyHypometh 8.8660e-01 6.4199e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.07535799 1.3402e-02 weaklyHypometh 4.3285e-01 insignificant 0.6506955 0.9292509 -2.7404e-01 11 0.6814619 0.8637799 -0.18231794 9.9990e-01 1.1684e-07 hypomethylated 1.0000e+00 2.0865e-06 hypomethylated 9.9977e-01 3.3595e-04 hypomethylated 1.0000000 5.5991e-03 hypomethylated -2.3697e-01 8.7000e-04 hypomethylated 2.1750e-02 hypomethylated chr19 574850 575850 52747 HCN2 ENSG00000099822 0.934180 220 6 0.893408 247 8 0.779265 290 8 0.8208525 102 4 0.8996032 90 5 0.947308 266 5 0.8716580 176 5 0.9625107 91 5 0.9426386 114 5 0.927403 127 5 0.876964 196 5 0.8875817 90 5 0.87878753 191 5 NA 0 0 0.9362648 150 5 0.8121849 59 5 0.9333838 102 5 0.8318384 154 7 0.9468156 125 5 0.854132 250 5 0.916667 129 5 0.948741 70 4 0.822558 207 8 0.9017992 133 5 0.975000 41 3 0.8848938 292 8 0.900429 128 5 0.970635 90 5 0.932961 132 5 0.893475 238 8 0.8278206 192 8 0.9203879 300 5 0.8086544 261 8 0.8339850 143 5 0.8269841 96 5 0.9175586 51 3 0.9088283 108 5 0.6007720 201 8 0.686876 196 5 0.8067987 249 7 0.8345728 137 5 0.9715383 187 5 0.6161267 132 6 0.907576 0.9163284 0.849419 0.9209206 0.873970 0.929807 0.8574165 0.9517406 0.941351 0.921718 0.8746903 0.910114 0.8866926 NA 0.9342427 0.8065783 0.9256656 0.9462174 0.9206534 0.966079 0.938717 0.9316824 0.927431 0.8871045 0.9587629 0.9463728 0.910424 0.966072 0.914168 0.8930292 0.8800305 0.9424356 0.9503627 0.7919231 0.9131828 8.8489e-01 0.91194661 0.9255543 0.932859 0.9394132 0.956331 0.9453511 0.9270512 4 0.8950658 0.9052254 -0.01648441 6 0.850487 0.871657 -0.02117086 0.78795385 6.6507e-02 insignificant 1.00000 1.000000 insignificant 0.79594210 3.1756e-01 insignificant 1.00000 1.000000 insignificant -0.01653774 0.37858131 insignificant 1.00000 insignificant 0.8950658 0.7965116 0.03454897 6 0.850487 0.7360797 0.1144069 2.0135e-02 9.5589e-01 weaklyHypermeth 9.9997e-02 1.0000e+00 weaklyHypermeth 1.3694e-01 9.6029e-01 insignificant 7.2456e-01 1.0000e+00 insignificant 0.0752790 1.7328e-01 insignificant 9.6266e-01 insignificant 0.8950658 0.9200888 -0.01303492 5 0.8504866 0.7525426 0.09794395 8.7537e-03 2.0421e-01 inconclusive 1.0547e-01 1.0000e+00 insignificant 2.0422e-01 3.1633e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.1082269 1.5452e-01 insignificant 1.0000e+00 insignificant 0.9052254 0.7965116 0.0730624 7 0.871657 0.7360797 0.13557777 1.6679e-02 9.8300e-01 weaklyHypermeth 9.6408e-02 1.0000e+00 weaklyHypermeth 8.6052e-02 9.9415e-01 insignificant 4.7806e-01 1.0000000 insignificant 0.09181677 1.0997e-01 insignificant 7.0805e-01 insignificant 0.9052254 0.9200888 3.7051e-04 5 0.8716574 0.7525426 1.1911e-01 9.9073e-03 5.2574e-01 weaklyHypermeth 1.3572e-01 1.0000e+00 insignificant 2.7434e-01 8.1313e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.12476467 1.1268e-01 insignificant 1.0000e+00 insignificant 0.7965116 0.9200888 -3.3170e-02 5 0.7360797 0.7525426 -0.01646297 8.8738e-01 1.8709e-01 insignificant 1.0000e+00 9.0383e-01 insignificant 9.2791e-01 2.3904e-01 insignificant 1.0000000 1.0000e+00 insignificant 3.2948e-02 6.8161e-01 insignificant 1.0000e+00 insignificant chr19 820250 821250 52749 CFD ENSG00000197766 0.870617 313 8 0.800833 299 10 0.691246 234 12 0.9069996 376 9 0.9522304 77 5 0.916630 464 11 0.9082374 141 6 0.7450152 206 9 0.7977329 189 9 0.703339 172 7 0.902452 303 9 0.6790675 83 3 0.90089597 212 9 0.767563 115 6 0.8143782 147 7 0.7595238 42 3 0.6111111 43 3 0.6165483 531 10 0.7721407 157 8 0.845272 304 9 0.822516 97 7 0.877649 158 8 0.907018 222 11 0.7083722 125 7 0.773733 165 8 0.8511172 333 9 0.716577 185 9 0.549888 72 4 0.941425 220 7 0.855202 359 10 0.8786163 350 12 0.8963630 380 10 0.1634998 384 10 0.0542579 293 8 0.0328283 334 11 0.3453283 66 6 0.3226993 278 7 0.2150107 361 12 0.921108 170 8 0.7841405 319 10 0.8292252 311 8 0.6005239 198 8 0.8684521 313 9 0.834212 0.8874044 0.743398 0.8976282 0.953010 0.916904 0.9428049 0.9110190 0.847738 0.907401 0.9298940 0.818188 0.8914759 0.8736507 0.8374558 0.8346048 0.8488147 0.8213075 0.8403381 0.918400 0.835384 0.8919821 0.905008 0.8639191 0.9223896 0.9078521 0.806756 0.839566 0.905658 0.9232170 0.9019932 0.8650311 0.3520663 0.1497848 0.0985498 5.3152e-01 0.44071714 0.4287712 0.952429 0.9185296 0.967126 0.8606054 0.9295528 3 0.8282668 0.8753286 -0.04577740 9 0.786835 0.837719 -0.05088471 0.99997939 1.0571e-02 weaklyHypometh 1.00000 0.528539 insignificant 0.98686129 4.0850e-01 insignificant 1.00000 1.000000 insignificant -0.01678139 0.67389747 insignificant 1.00000 insignificant 0.8283379 0.1334499 0.64404616 9 0.776871 0.1948292 0.5820416 3.6724e-79 1.0000e+00 hypermethylated 2.8249e-77 1.0000e+00 hypermethylated 7.5688e-20 1.0000e+00 hypermethylated 3.9836e-18 1.0000e+00 hypermethylated 0.6091542 1.7103e-05 hypermethylated 4.2757e-04 hypermethylated 0.8282989 0.8419847 -0.02053528 8 0.7597070 0.7497611 0.00994595 4.7293e-01 1.9291e-02 weaklyHypometh 1.0000e+00 4.8228e-01 insignificant 3.5891e-01 6.5091e-02 insignificant 1.0000e+00 1.00000000 insignificant -0.0025982 9.6670e-01 insignificant 1.0000e+00 insignificant 0.8754234 0.1334499 0.6956099 9 0.838659 0.1948292 0.64383015 5.2573e-77 1.0000e+00 hypermethylated 7.5105e-75 1.0000e+00 hypermethylated 2.6997e-17 1.0000e+00 hypermethylated 1.6663e-15 1.0000000 hypermethylated 0.62593563 4.5277e-06 hypermethylated 1.3317e-04 hypermethylated 0.8750000 0.8413425 2.8257e-02 8 0.7672308 0.6962067 7.1024e-02 1.0806e-01 5.2701e-01 insignificant 9.8238e-01 1.0000e+00 insignificant 3.2837e-01 2.0237e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01418315 8.2980e-01 insignificant 1.0000e+00 insignificant 0.1329446 0.8419847 -6.7269e-01 8 0.1328930 0.7497611 -0.61686806 1.0000e+00 1.4925e-42 hypomethylated 1.0000e+00 1.8656e-40 hypomethylated 1.0000e+00 1.7394e-10 hypomethylated 1.0000000 9.1545e-09 hypomethylated -6.1175e-01 2.5265e-05 hypomethylated 1.9434e-03 hypomethylated chr19 884650 885650 52752 ARID3A ENSG00000116017 0.894008 487 18 0.768703 477 16 0.856652 498 19 0.9223708 476 15 0.8247605 302 19 0.830541 552 18 0.8394839 396 18 0.8957865 388 18 0.8705623 436 18 0.869303 494 18 0.772183 615 19 0.7597332 264 16 0.79803247 460 18 0.815211 289 10 0.8952097 449 18 0.7602715 207 15 0.8357565 166 12 0.8585198 476 15 0.7858579 666 19 0.872966 481 19 0.892330 362 19 0.803514 256 11 0.885551 438 19 0.8304530 293 18 0.942947 331 12 0.9048501 590 17 0.779337 533 17 0.817875 210 15 0.832649 593 16 0.939868 643 18 0.8641726 567 17 0.9201763 745 19 0.6771292 429 18 0.7643102 354 18 0.7082054 1027 15 0.6980300 193 12 0.6114856 365 18 0.6407393 628 19 0.825724 320 15 0.8994934 419 18 0.7675969 296 15 0.7960753 298 15 0.8052377 334 17 0.880613 0.8410779 0.828154 0.9514121 0.832361 0.856219 0.8178552 0.8518233 0.863301 0.887104 0.8714595 0.787991 0.8174011 0.8865233 0.8672791 0.7848098 0.7670180 0.8394327 0.7485366 0.871522 0.892721 0.8181211 0.924507 0.8036169 0.9255510 0.8978187 0.867490 0.834844 0.839076 0.9375656 0.8309295 0.9124821 0.6844078 0.7212904 0.6805108 6.3880e-01 0.62845410 0.7013743 0.883283 0.8755339 0.843531 0.7611185 0.8695800 11 0.8698694 0.8888089 -0.01720092 19 0.815700 0.819669 -0.00396882 0.92339149 1.2749e-02 weaklyHypometh 1.00000 0.607099 insignificant 0.99878443 1.5859e-03 weaklyHypometh 1.00000 0.315568 insignificant -0.03151457 0.11771015 insignificant 1.00000 insignificant 0.8702148 0.7017368 0.15968107 19 0.836243 0.6653552 0.1708882 9.8858e-26 8.2982e-01 weaklyHypermeth 2.1491e-24 1.0000e+00 weaklyHypermeth 9.6292e-07 3.6311e-01 weaklyHypermeth 1.5531e-05 1.0000e+00 weaklyHypermeth 0.1529790 2.8331e-04 weaklyHypermeth 5.1510e-03 weaklyHypermeth 0.8705305 0.8566287 0.00979814 15 0.8480556 0.8034245 0.04463103 1.6293e-01 7.6947e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.9282e-01 8.5576e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0174702 5.0790e-01 insignificant 1.0000e+00 insignificant 0.8890889 0.7017368 0.1680394 19 0.865987 0.6653552 0.20063186 3.7475e-26 9.1645e-01 weaklyHypermeth 1.0128e-24 1.0000e+00 weaklyHypermeth 5.9598e-08 9.8568e-01 weaklyHypermeth 1.2956e-06 1.0000000 weaklyHypermeth 0.18449354 3.9757e-05 weaklyHypermeth 9.4660e-04 weaklyHypermeth 0.8899910 0.8566287 2.5030e-02 15 0.8926197 0.8034245 8.9195e-02 1.5940e-02 9.5900e-01 weaklyHypermeth 1.9680e-01 1.0000e+00 insignificant 2.8425e-02 9.9560e-01 weaklyHypermeth 4.3731e-01 1.0000e+00 insignificant 0.04898477 1.0888e-01 insignificant 1.0000e+00 insignificant 0.7028112 0.8566287 -1.7855e-01 15 0.6902896 0.8034245 -0.11313495 8.8255e-01 3.0587e-11 weaklyHypometh 1.0000e+00 7.4602e-10 weaklyHypometh 6.9292e-01 8.5815e-03 weaklyHypometh 1.0000000 8.6682e-02 weaklyHypometh -1.3551e-01 1.9448e-03 weaklyHypometh 3.8896e-02 weaklyHypometh chr19 892450 893450 52753 ARID3A ENSG00000116017 0.964997 679 17 0.894845 403 14 0.900675 394 11 0.9678883 698 20 0.9480532 255 12 0.895572 595 13 0.9522675 207 10 0.9769630 372 12 0.8218630 242 10 0.962061 432 12 0.934069 600 19 0.9326282 203 15 0.94786719 469 12 0.986578 291 9 0.9728379 515 13 0.8540981 143 14 0.7977273 69 4 0.9580632 1119 20 0.9731567 761 16 0.873320 475 13 0.658952 156 8 0.810152 290 13 0.919125 365 12 0.8828070 135 9 0.770307 180 8 0.9399807 605 16 0.765525 432 9 0.814737 192 9 0.914133 614 15 0.955301 527 16 0.9595358 497 16 0.9592906 622 19 0.8168645 376 11 0.9490969 474 15 0.7394873 520 13 0.9700000 58 4 0.8694930 179 10 0.9268196 523 12 0.751171 496 20 0.8095729 687 20 0.9021449 580 20 0.8154753 806 20 0.9303345 470 20 0.959303 0.9039161 0.931411 0.9690046 0.946773 0.933083 0.9360337 0.9431336 0.929685 0.954553 0.9216075 0.875088 0.9750614 0.9800430 0.9633365 0.9278117 0.9036745 0.9592235 0.9563047 0.954302 0.980827 0.9215180 0.949679 0.9756870 0.9008997 0.9233358 0.917033 0.950120 0.965783 0.9273316 0.9727814 0.9556966 0.9259833 0.9123730 0.9871620 9.3945e-01 0.92268086 0.8666083 0.951559 0.9442295 0.947169 0.9223872 0.9619533 8 0.9499607 0.9473342 0.00285273 16 0.945266 0.808800 0.13646616 0.32068372 9.8190e-01 insignificant 1.00000 1.000000 insignificant 0.24620218 9.9255e-01 insignificant 1.00000 1.000000 insignificant 0.06328935 0.05595282 insignificant 1.00000 insignificant 0.9499439 0.9318929 0.01976205 13 0.943077 0.7799383 0.1631387 5.2277e-03 8.3679e-01 weaklyHypermeth 3.1303e-02 1.0000e+00 weaklyHypermeth 8.8744e-01 5.5061e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0471496 2.5966e-01 insignificant 1.0000e+00 insignificant 0.9499214 0.8975963 0.03161856 16 0.9353147 0.8360465 0.09926816 9.1791e-20 9.8853e-01 weaklyHypermeth 1.5299e-17 1.0000e+00 weaklyHypermeth 2.7972e-10 9.9528e-01 weaklyHypermeth 3.9960e-08 1.00000000 weaklyHypermeth 0.0840369 5.9551e-02 insignificant 7.1549e-01 insignificant 0.9477337 0.9318289 0.0177800 13 0.870818 0.7608024 0.11001509 3.2497e-01 6.1621e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9481e-01 3.6965e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.01613972 7.3036e-01 insignificant 1.0000e+00 insignificant 0.9483395 0.8975626 3.1507e-02 16 0.9299430 0.8282392 1.0170e-01 1.0893e-07 9.9907e-01 weaklyHypermeth 5.4465e-06 1.0000e+00 weaklyHypermeth 1.9948e-04 9.9987e-01 weaklyHypermeth 7.3882e-03 1.0000e+00 weaklyHypermeth 0.02074751 6.4070e-01 insignificant 1.0000e+00 insignificant 0.9327059 0.8975626 7.4729e-03 13 0.8332598 0.8282392 0.00502059 1.7049e-05 9.7377e-01 weaklyHypermeth 3.4098e-03 1.0000e+00 weaklyHypermeth 1.2820e-04 9.9926e-01 weaklyHypermeth 0.0427328 1.0000e+00 weaklyHypermeth 3.6887e-02 4.6780e-01 insignificant 1.0000e+00 insignificant chr19 912050 913050 52754 ARID3A ENSG00000116017 0.872564 86 4 0.791714 86 5 0.673877 136 5 0.8849206 40 5 0.8695402 81 5 0.771284 101 7 0.8167857 125 5 0.8709761 102 5 0.8875000 96 5 0.816754 89 5 0.804042 130 5 0.7929355 100 5 0.72071137 138 5 0.866667 28 3 0.7269298 102 5 0.7537037 52 3 0.5970955 102 5 0.7206583 76 4 0.6081499 138 7 0.678719 137 5 0.905275 52 5 0.118026 77 4 0.696304 89 5 0.7872727 60 5 0.559524 25 4 0.8044021 134 7 0.767702 72 5 0.710693 50 5 0.683452 96 5 0.603996 162 5 0.3770325 150 5 0.7265899 179 7 0.3884259 160 5 0.2577147 158 5 0.8214286 104 7 0.6953141 139 7 0.5272727 37 4 0.6973443 122 7 0.251992 96 5 0.2144253 109 5 0.4309506 63 4 0.3438589 143 5 0.5157653 112 5 0.812524 0.7804968 0.682030 0.8395692 0.876715 0.893218 0.8242438 0.8690982 0.884885 0.824483 0.7767746 0.807442 0.7237745 0.8788265 0.7196227 0.7732899 0.6048385 0.6835877 0.6091528 0.663722 0.911185 0.1266650 0.855205 0.8017677 0.5751850 0.7699346 0.771680 0.693788 0.675580 0.7157399 0.5346882 0.8702855 0.3507872 0.2376008 0.7257653 5.8031e-01 0.50450570 0.5597473 0.308791 0.2264600 0.209896 0.2806702 0.5240844 5 0.7491003 0.7007874 0.05179672 5 0.735232 0.688548 0.04668466 0.01967702 8.8294e-01 weaklyHypermeth 1.00000 1.000000 insignificant 0.00541923 9.8378e-01 weaklyHypermeth 0.98528 1.000000 insignificant 0.13125395 0.06346746 lowCoverage 1.00000 lowCoverage 0.7491003 0.5611111 0.21716816 5 0.735232 0.6186020 0.1166303 2.4628e-12 6.7539e-02 hypermethylated 3.1575e-11 1.0000e+00 hypermethylated 8.8107e-04 4.7668e-01 hypermethylated 8.2343e-03 1.0000e+00 hypermethylated 0.2116930 5.8992e-02 lowCoverage 4.3013e-01 lowCoverage 0.7491003 0.3193117 0.44858724 5 0.7352322 0.3797272 0.35550499 6.6603e-25 9.9999e-01 hypermethylated 1.6651e-22 1.0000e+00 hypermethylated 1.6469e-10 1.0000e+00 hypermethylated 2.7448e-08 1.00000000 hypermethylated 0.4248780 7.5831e-04 lowCoverage 6.4842e-02 lowCoverage 0.7007874 0.5611111 0.1888467 5 0.688548 0.6186020 0.06994560 5.6282e-04 1.0729e-01 weaklyHypermeth 4.2963e-03 1.0000e+00 weaklyHypermeth 6.2316e-02 1.2854e-01 insignificant 3.6884e-01 1.0000000 insignificant 0.08043910 4.6799e-01 insignificant 1.0000e+00 insignificant 0.7007874 0.3193117 3.8049e-01 5 0.6885476 0.3797272 3.0882e-01 6.2150e-10 9.9990e-01 hypermethylated 5.1792e-08 1.0000e+00 hypermethylated 7.1384e-06 9.9799e-01 hypermethylated 5.4910e-04 1.0000e+00 hypermethylated 0.29362407 3.7469e-03 lowCoverage 2.1622e-01 lowCoverage 0.5611111 0.3193117 1.4462e-01 5 0.6186020 0.3797272 0.23887473 1.9183e-04 9.8397e-01 weaklyHypermeth 2.3979e-02 1.0000e+00 weaklyHypermeth 5.8468e-03 9.4451e-01 weaklyHypermeth 0.6384781 1.0000e+00 insignificant 2.1318e-01 7.2112e-02 lowCoverage 5.4631e-01 lowCoverage chr19 945950 946950 52755 WDR18 ENSG00000065268 0.942285 236 7 0.736603 202 8 0.886220 301 8 0.8386364 340 8 0.8554962 276 8 0.900578 390 8 0.8172007 222 8 0.8472543 285 8 0.8847158 278 8 0.934836 340 8 0.826497 310 8 0.8245400 173 7 0.92514160 266 7 0.906061 226 6 0.9185323 309 8 0.7579861 124 6 0.6815629 124 4 0.8249899 311 7 0.8766732 283 8 0.862086 303 7 0.842869 125 7 0.936363 170 7 0.936890 230 8 0.7715596 171 8 0.925640 376 8 0.9004015 270 8 0.895151 237 7 0.838718 186 8 0.887817 258 7 0.787123 317 8 0.8830879 221 8 0.9002244 280 7 0.6353886 231 8 0.5947491 189 8 0.8136364 225 7 0.7878788 116 6 0.7249136 242 9 0.7697752 294 8 0.848456 186 7 0.9494995 232 8 0.9297161 173 8 0.9336324 396 7 0.9352750 241 8 0.932674 0.7787094 0.836875 0.9269878 0.752963 0.944045 0.8872614 0.8160663 0.849815 0.908945 0.7762382 0.819770 0.8771256 0.9316989 0.8885342 0.6384066 0.6946671 0.9604995 0.8368318 0.894947 0.761298 0.9371064 0.899828 0.7714530 0.9006905 0.8610190 0.893310 0.865171 0.859648 0.8962898 0.8681607 0.9309632 0.7536083 0.7066425 0.8030303 8.2502e-01 0.79357997 0.7848067 0.939362 0.9452890 0.935384 0.9435894 0.9317755 7 0.8420457 0.8679577 -0.01447114 8 0.796023 0.821476 -0.02545290 0.98725081 2.5313e-01 insignificant 1.00000 1.000000 insignificant 0.98381050 8.1240e-02 insignificant 1.00000 1.000000 insignificant -0.02309228 0.30104050 insignificant 1.00000 insignificant 0.8420457 0.7972244 0.06738983 8 0.796023 0.7339033 0.0621202 2.1256e-08 3.3824e-01 weaklyHypermeth 2.0439e-07 1.0000e+00 weaklyHypermeth 5.3253e-03 2.6240e-01 weaklyHypermeth 4.0651e-02 1.0000e+00 weaklyHypermeth 0.1313379 1.2250e-02 weaklyHypermeth 1.1779e-01 insignificant 0.8420457 0.9445803 -0.08068222 7 0.7960235 0.8529387 -0.05691528 7.4359e-01 8.1153e-03 weaklyHypometh 1.0000e+00 2.6178e-01 insignificant 9.0685e-01 1.6167e-02 weaklyHypometh 1.0000e+00 0.56093017 insignificant -0.0669210 1.6713e-02 weaklyHypometh 2.9370e-01 insignificant 0.8679577 0.7972244 0.0816798 8 0.821476 0.7339033 0.08757307 5.9582e-06 7.2779e-01 weaklyHypermeth 5.7290e-05 1.0000e+00 weaklyHypermeth 5.3301e-03 9.0620e-01 weaklyHypermeth 4.4051e-02 1.0000000 weaklyHypermeth 0.15443013 5.6390e-03 weaklyHypermeth 6.6341e-02 weaklyHypermeth 0.8680042 0.9446254 -6.4759e-02 7 0.8377058 0.8663079 -2.8602e-02 8.2976e-01 7.4438e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 8.6683e-01 2.0630e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04382869 9.6422e-02 insignificant 1.0000e+00 insignificant 0.7972244 0.9445803 -1.3040e-01 7 0.7339033 0.8529387 -0.11903544 9.9985e-01 1.6431e-05 weaklyHypometh 1.0000e+00 2.0899e-04 weaklyHypometh 9.4815e-01 4.6413e-03 weaklyHypometh 1.0000000 5.3969e-02 weaklyHypometh -1.9826e-01 1.5204e-03 weaklyHypometh 3.1674e-02 weaklyHypometh chr19 1076150 1077150 52757 GPX4 ENSG00000167468 0.954644 87 4 0.791667 42 4 0.890462 81 5 1.0000000 38 3 0.8571429 42 5 0.960833 91 5 0.8716792 124 5 0.9119048 29 4 0.9661172 73 5 0.933214 57 5 0.824601 77 5 0.9618182 62 5 0.94832298 71 5 1.000000 3 0 0.9777778 69 5 0.9750000 53 5 1.0000000 63 5 0.9102757 69 5 0.9666667 73 5 0.963690 88 5 0.938462 40 4 0.950000 22 1 0.938889 71 5 0.8443823 46 4 1.000000 17 1 0.8152958 43 4 0.962393 45 4 1.000000 57 5 0.864913 49 5 0.937374 63 5 0.9721088 67 5 0.8024486 182 5 0.8144444 28 3 0.8358974 57 5 0.7500000 7 0 0.9482353 64 5 0.7857143 25 1 0.9818182 37 4 0.963590 91 5 0.9505532 100 5 0.9108333 49 3 0.9844078 91 5 0.9619048 72 3 0.942089 0.9210993 0.903186 1.0000000 1.000000 0.958333 0.9325868 0.8648936 0.953969 0.939115 0.9586240 0.968569 0.9407625 NA 0.9869976 0.9853723 1.0000000 0.8741535 0.9618794 0.971536 0.963993 0.9707447 0.945626 0.8808709 1.0000000 0.9579841 0.964084 1.000000 0.879125 0.9594885 0.9463019 0.9619106 0.8355792 0.8925259 0.7990780 9.6408e-01 0.94148936 0.9690522 0.952755 0.9527033 0.897163 0.9790105 0.9614995 1 0.9442724 0.9430199 0.00154208 5 0.890085 0.887035 0.00305080 0.71961891 7.5267e-01 insignificant 1.00000 1.000000 insignificant 0.72295257 7.4715e-01 insignificant 1.00000 1.000000 insignificant 0.01443530 0.55380040 lowCoverage 1.00000 lowCoverage 0.9442724 0.9082569 0.03433311 3 0.890085 0.7771315 0.1129539 1.1294e-02 8.8820e-01 lowCoverage 6.3095e-02 1.0000e+00 lowCoverage 3.1143e-01 9.1566e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0806059 8.7928e-02 lowCoverage 5.7096e-01 lowCoverage 0.9473684 0.9454094 -0.00027786 5 0.9461195 0.9562987 -0.01017920 6.9916e-01 1.5678e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.7535e-01 2.8836e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0209669 2.6206e-01 lowCoverage 1.0000e+00 lowCoverage 0.9430199 0.9082569 0.0349095 3 0.887035 0.7771315 0.10990309 1.5878e-01 9.5891e-01 lowCoverage 7.1524e-01 1.0000e+00 lowCoverage 5.0575e-01 9.6473e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 0.06617059 1.5971e-01 lowCoverage 9.3339e-01 lowCoverage 0.9454023 0.9454094 2.7055e-03 5 0.9418484 0.9562987 -1.4450e-02 3.4543e-01 3.3116e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.1116e-02 3.0781e-01 insignificant 7.7300e-01 1.0000e+00 insignificant -0.03540223 1.5095e-01 lowCoverage 1.0000e+00 lowCoverage 0.9205607 0.9454094 -3.0079e-02 3 0.8879841 0.9562987 -0.06831464 5.2261e-01 1.7208e-01 lowCoverage 1.0000e+00 8.4770e-01 lowCoverage 3.0707e-01 2.8416e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage -1.0157e-01 4.2483e-02 lowCoverage 3.8273e-01 lowCoverage chr19 1105950 1106950 52758 SBNO2 ENSG00000064932 0.906003 394 9 0.897267 190 9 0.677809 225 9 0.9581514 388 9 0.9400353 89 9 0.884277 593 8 0.9279248 166 8 0.9279901 181 9 0.8896718 199 9 0.931626 205 9 0.898704 283 9 0.8037898 113 9 0.92247179 203 9 NA 0 0 0.9367619 189 9 0.8458333 72 6 0.9283069 94 6 0.6561652 473 9 0.9299512 202 9 0.937934 518 8 0.910568 185 9 0.731957 176 9 0.907037 294 9 0.9139183 197 9 0.802810 94 7 0.9095154 219 9 0.905159 171 9 0.951316 95 6 0.861207 176 9 0.940764 240 9 0.9550535 202 9 0.8828653 407 9 0.1361231 306 9 0.1921854 231 9 0.2545875 471 8 0.1772487 117 9 0.2441903 136 9 0.3316407 254 9 0.830750 332 9 0.7311199 451 9 0.8287523 347 9 0.7123707 445 9 0.8196121 356 9 0.894676 0.8814018 0.604823 0.9442321 0.966547 0.909149 0.9252509 0.9315594 0.898224 0.909731 0.8984178 0.788360 0.9295270 NA 0.9191588 0.8904628 0.9076223 0.5744663 0.9383737 0.918600 0.915566 0.6602134 0.923575 0.8881569 0.8120048 0.9053867 0.915126 0.931251 0.847526 0.9441990 0.9497227 0.8893707 0.0622168 0.0807493 0.1150794 7.4698e-02 0.11334485 0.1275421 0.793247 0.6560082 0.800996 0.6524430 0.7618475 6 0.8679087 0.8957655 -0.02400116 9 0.878278 0.900595 -0.02231614 0.88106495 9.4734e-02 insignificant 1.00000 1.000000 insignificant 0.61878712 3.5726e-01 insignificant 1.00000 1.000000 insignificant -0.00510139 0.85118507 insignificant 1.00000 insignificant 0.8679087 0.1188119 0.74614211 9 0.878278 0.2289313 0.6493471 3.0215e-68 1.0000e+00 hypermethylated 1.5903e-66 1.0000e+00 hypermethylated 4.7696e-18 1.0000e+00 hypermethylated 1.9874e-16 1.0000e+00 hypermethylated 0.6615834 2.1534e-09 hypermethylated 1.0254e-07 hypermethylated 0.8679087 0.7203521 0.13876126 9 0.8782784 0.7770582 0.10122017 4.0694e-05 9.3902e-01 weaklyHypermeth 1.0998e-03 1.0000e+00 weaklyHypermeth 1.1757e-06 9.5306e-01 weaklyHypermeth 9.0442e-05 1.00000000 weaklyHypermeth 0.0997251 1.2854e-02 weaklyHypermeth 2.6187e-01 insignificant 0.8957655 0.1188119 0.7532817 9 0.900595 0.2289313 0.67166320 3.1195e-69 1.0000e+00 hypermethylated 2.5996e-67 1.0000e+00 hypermethylated 7.5499e-17 1.0000e+00 hypermethylated 4.1944e-15 1.0000000 hypermethylated 0.66668481 4.9341e-09 hypermethylated 4.1118e-07 hypermethylated 0.8957655 0.7203521 1.5042e-01 9 0.9005945 0.7770582 1.2354e-01 1.2958e-10 9.8808e-01 weaklyHypermeth 1.2958e-08 1.0000e+00 weaklyHypermeth 5.8825e-07 9.7831e-01 weaklyHypermeth 9.8042e-05 1.0000e+00 weaklyHypermeth 0.10482650 1.0326e-02 weaklyHypermeth 3.9717e-01 insignificant 0.1188119 0.7203521 -6.1705e-01 9 0.2289313 0.7770582 -0.54812689 1.0000e+00 1.3352e-39 hypomethylated 1.0000e+00 1.3352e-37 hypomethylated 1.0000e+00 5.9846e-11 hypomethylated 1.0000000 3.5204e-09 hypomethylated -5.6186e-01 1.3651e-07 hypomethylated 2.7303e-05 hypomethylated chr19 1111150 1112150 52759 SBNO2 ENSG00000064932 0.847101 708 21 0.750780 700 21 0.726532 626 19 0.8582154 737 20 0.8738517 475 18 0.766257 786 21 0.7698964 555 19 0.8436485 547 20 0.8270372 462 16 0.827103 497 17 0.845106 851 21 0.8119971 292 14 0.87008566 413 19 0.800358 303 11 0.8649487 517 19 0.8806970 291 15 0.8892113 665 11 0.7710609 894 19 0.8478413 1103 17 0.854997 692 19 0.780730 306 18 0.687212 259 9 0.813449 636 17 0.7380180 352 16 0.756799 373 16 0.8027763 816 21 0.800683 607 21 0.795864 238 12 0.833664 1110 19 0.819900 780 21 0.8557462 811 19 0.8465704 1049 21 0.7287826 512 23 0.7711847 640 19 0.6251455 636 13 0.8315658 277 14 0.7044022 472 19 0.8141159 833 20 0.878429 860 20 0.8570505 792 19 0.8439464 501 19 0.8339946 813 16 0.7551395 742 19 0.905675 0.8393097 0.871083 0.9475077 0.946465 0.920630 0.8963014 0.8713286 0.888308 0.922859 0.8950077 0.920059 0.9179763 0.9119122 0.8964513 0.9521190 0.9426267 0.9017418 0.9319443 0.920000 0.935747 0.8394098 0.863471 0.8706315 0.7950368 0.9286646 0.852581 0.924413 0.917579 0.9176143 0.9099199 0.9319044 0.8400930 0.8437934 0.7827941 9.7444e-01 0.88457985 0.9464099 0.903908 0.9382439 0.906081 0.9200654 0.9256880 12 0.8989507 0.8950525 0.00050895 19 0.783469 0.708152 0.07531638 0.12308978 8.7382e-01 insignificant 1.00000 1.000000 insignificant 0.08559184 9.3127e-01 insignificant 1.00000 1.000000 insignificant 0.03205196 0.07900730 insignificant 1.00000 insignificant 0.8989674 0.8715134 0.01264688 19 0.790235 0.7117146 0.0785208 7.8440e-04 8.0587e-01 weaklyHypermeth 5.3000e-03 1.0000e+00 weaklyHypermeth 5.1536e-01 6.1336e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0804701 4.9099e-02 weaklyHypermeth 3.7410e-01 insignificant 0.8990492 0.9174757 -0.01506161 17 0.8031261 0.7964115 0.00671461 9.3205e-01 1.3383e-02 weaklyHypometh 1.0000e+00 3.7175e-01 insignificant 9.1856e-01 6.4644e-02 insignificant 1.0000e+00 1.00000000 insignificant -0.0073758 7.6400e-01 insignificant 1.0000e+00 insignificant 0.8951745 0.8722899 0.0152446 20 0.731757 0.7591623 -0.02740479 7.8639e-02 7.4382e-01 insignificant 3.8548e-01 1.0000e+00 insignificant 8.4338e-01 2.9645e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.04841819 1.9902e-01 insignificant 1.0000e+00 insignificant 0.8962032 0.9177010 -1.7073e-02 17 0.7904894 0.8192124 -2.8723e-02 9.4710e-01 4.4553e-03 weaklyHypometh 1.0000e+00 3.5583e-01 insignificant 8.5823e-01 2.2009e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.03942777 1.5729e-01 insignificant 1.0000e+00 insignificant 0.8718406 0.9177232 -3.0623e-02 17 0.7138840 0.8259083 -0.11202426 9.9035e-01 2.6318e-02 weaklyHypometh 1.0000e+00 1.6347e-01 insignificant 9.4217e-01 2.9904e-01 insignificant 1.0000000 1.0000e+00 insignificant -8.7846e-02 4.6324e-02 weaklyHypometh 4.0551e-01 insignificant chr19 1172550 1173550 52762 STK11 ENSG00000118046 0.785511 143 6 0.655952 128 7 0.509632 97 5 0.9023551 164 5 0.7625000 74 5 0.864292 321 8 0.5925926 76 5 0.8817425 207 9 0.8523392 78 5 0.871517 129 8 0.753100 323 11 0.6875000 54 3 0.79290647 200 11 0.788961 127 8 0.8547619 120 5 0.6916667 27 1 1.0000000 2 0 0.9139268 229 8 0.7895521 382 10 0.639350 258 7 0.855519 122 10 0.803030 35 4 0.795392 124 7 0.7751804 122 4 0.993590 81 7 0.9191495 257 10 0.634573 209 10 0.573148 79 5 0.832014 229 9 0.896561 253 11 0.8828586 271 11 0.8378565 255 9 0.4722969 171 5 0.8537485 193 10 0.8558559 188 5 0.8000000 27 3 0.5364337 116 8 0.7474482 317 10 0.936543 110 5 0.8764319 163 8 0.8250000 76 5 0.6013732 244 5 0.8076923 106 5 0.943368 0.9294574 0.821807 0.9675205 0.970155 0.953304 0.8514212 0.9587738 0.977152 0.958214 0.9293827 0.932171 0.9523427 0.9302326 0.9393023 0.9593023 NA 0.8911763 0.9523426 0.961845 0.916541 0.7984496 0.920949 0.9191919 1.0000000 0.9060810 0.845515 0.961563 0.889703 0.9831180 0.8868800 0.9167358 0.6045235 0.7246846 0.9285565 7.6411e-01 0.68792783 0.6522503 0.815147 0.8318457 0.827519 0.8013982 0.8723912 3 0.9141946 0.8973981 0.01495711 10 0.701320 0.752655 -0.05133513 0.45621723 5.8645e-01 insignificant 1.00000 1.000000 insignificant 0.82314999 4.5886e-01 insignificant 1.00000 1.000000 insignificant -0.03706476 0.39955810 insignificant 1.00000 insignificant 0.9141946 0.7470356 0.15177874 8 0.701320 0.5946548 0.1066651 9.0790e-06 8.4455e-01 weaklyHypermeth 7.3217e-05 1.0000e+00 weaklyHypermeth 1.5709e-01 6.1118e-01 insignificant 8.1392e-01 1.0000e+00 insignificant 0.0685440 3.8078e-01 insignificant 1.0000e+00 insignificant 0.9189971 0.8696275 0.08313446 5 0.8278070 0.8056261 0.02218090 4.1354e-04 4.7466e-01 weaklyHypermeth 7.2552e-03 1.0000e+00 weaklyHypermeth 6.0633e-01 1.7029e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0299002 6.5089e-01 insignificant 1.0000e+00 insignificant 0.8973981 0.7470356 0.1329377 8 0.752655 0.5946548 0.15800026 1.9569e-04 6.1398e-01 weaklyHypermeth 1.6307e-03 1.0000e+00 weaklyHypermeth 5.4885e-02 6.6103e-01 insignificant 3.3063e-01 1.0000000 insignificant 0.10560879 2.0279e-01 insignificant 1.0000e+00 insignificant 0.9028884 0.8705036 6.1746e-02 5 0.8117469 0.8135727 -1.8257e-03 3.1051e-02 1.0625e-01 weaklyHypermeth 3.5691e-01 1.0000e+00 insignificant 6.9739e-01 8.2889e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00716455 9.1647e-01 insignificant 1.0000e+00 insignificant 0.7532468 0.8705036 -9.2209e-02 5 0.7109847 0.8135727 -0.10258799 9.5549e-01 6.0814e-02 insignificant 1.0000e+00 3.4951e-01 insignificant 9.9817e-01 2.2748e-01 insignificant 1.0000000 1.0000e+00 insignificant -9.8444e-02 2.9432e-01 insignificant 1.0000e+00 insignificant chr19 1264050 1265050 52763 EFNA2 ENSG00000099617 0.796929 999 30 0.702644 769 29 0.745815 902 33 0.7571100 1053 30 0.7109564 458 26 0.850615 942 29 0.7381289 754 29 0.7380388 708 28 0.7291538 905 32 0.838146 859 30 0.821525 867 35 0.7079427 571 27 0.65291403 1124 33 0.728813 392 20 0.7709513 891 33 0.7264200 359 21 0.7423139 408 21 0.6619656 1310 30 0.7769236 717 33 0.797853 755 26 0.770845 355 25 0.594307 586 25 0.773565 626 28 0.6656312 483 28 0.775018 470 28 0.7780225 854 33 0.677164 761 31 0.605633 340 26 0.758963 814 28 0.748663 1047 31 0.7706037 855 34 0.8212534 1135 33 0.4943651 786 30 0.4761042 675 33 0.5264973 639 22 0.5914088 284 20 0.4272033 639 30 0.5931596 944 34 0.579987 863 28 0.5455418 1040 34 0.5168692 645 28 0.6613305 917 27 0.6076823 833 25 0.760075 0.7141963 0.673938 0.7613216 0.767964 0.838736 0.7435889 0.7286113 0.733988 0.808085 0.7960618 0.798133 0.5975306 0.7800311 0.7129370 0.7410934 0.6670626 0.6119344 0.7167737 0.755570 0.787153 0.5542248 0.798966 0.6855054 0.7351359 0.7412761 0.708604 0.669862 0.728027 0.7073704 0.7482345 0.8500340 0.4489946 0.3448125 0.4982770 5.0702e-01 0.43925444 0.5045682 0.600582 0.5078888 0.490343 0.6304196 0.5635338 21 0.7479990 0.7492193 -0.00400635 28 0.723267 0.699082 0.02418511 0.36172651 8.9016e-01 insignificant 1.00000 1.000000 insignificant 0.19886388 9.9932e-01 insignificant 1.00000 1.000000 insignificant 0.02145230 0.39021502 insignificant 1.00000 insignificant 0.7480305 0.4615385 0.28243909 29 0.728992 0.4888798 0.2401123 2.4929e-72 1.0000e+00 hypermethylated 1.4664e-70 1.0000e+00 hypermethylated 3.3315e-26 1.0000e+00 hypermethylated 3.0287e-24 1.0000e+00 hypermethylated 0.2316350 9.5493e-05 hypermethylated 2.0318e-03 hypermethylated 0.7482482 0.5921359 0.16890448 29 0.7448452 0.6088134 0.13603175 1.3011e-49 1.0000e+00 weaklyHypermeth 6.5054e-47 1.0000e+00 weaklyHypermeth 3.6679e-27 1.0000e+00 weaklyHypermeth 3.6679e-24 1.00000000 weaklyHypermeth 0.1674758 9.6689e-04 weaklyHypermeth 6.4842e-02 weaklyHypermeth 0.7494891 0.4615385 0.2842867 29 0.706018 0.4888798 0.21713857 3.5671e-44 1.0000e+00 hypermethylated 1.6214e-42 1.0000e+00 hypermethylated 5.2771e-19 1.0000e+00 hypermethylated 4.3976e-17 1.0000000 hypermethylated 0.21018265 6.7721e-05 hypermethylated 1.5049e-03 hypermethylated 0.7507841 0.5921359 1.7476e-01 27 0.7467680 0.6088134 1.3795e-01 7.1379e-30 1.0000e+00 weaklyHypermeth 3.5689e-27 1.0000e+00 weaklyHypermeth 1.8564e-17 1.0000e+00 weaklyHypermeth 9.2820e-15 1.0000e+00 weaklyHypermeth 0.14602350 1.2519e-03 weaklyHypermeth 1.2519e-01 insignificant 0.4616359 0.5921359 -1.2425e-01 27 0.5095137 0.6088134 -0.09929975 8.4153e-01 3.8595e-09 weaklyHypometh 1.0000e+00 8.2118e-08 weaklyHypometh 9.2152e-01 1.2386e-03 weaklyHypometh 1.0000000 1.6966e-02 weaklyHypometh -6.4159e-02 1.1463e-01 insignificant 7.4919e-01 insignificant chr19 1311750 1312750 52764 MUM1 ENSG00000160953 0.605706 123 5 0.470253 76 6 0.392470 173 8 0.4993921 90 5 0.3989879 75 5 0.803599 176 8 0.5546429 129 8 0.3463192 98 5 0.5171264 90 6 0.489429 121 5 0.497882 152 3 0.5922770 152 6 0.41203489 106 8 0.595139 81 5 0.5417720 217 8 0.3423203 91 6 0.6832011 175 5 0.3570437 160 8 0.5880717 162 5 0.650563 208 9 0.636111 77 3 0.212963 36 5 0.449914 102 4 0.4974359 60 5 0.426768 36 3 0.5547368 128 8 0.399802 142 7 0.458333 45 2 0.454588 144 6 0.678249 107 3 0.4137013 94 5 0.6698418 216 7 0.1090909 96 6 0.0393289 172 5 0.0000000 62 1 0.0000000 16 2 0.1767857 155 7 0.1857708 276 8 0.271008 211 5 0.4614006 164 8 0.3121934 109 8 0.3184811 175 8 0.4141975 83 7 0.730783 0.5586788 0.534244 0.6784792 0.616316 0.920641 0.6488571 0.6159997 0.695835 0.726034 0.6614335 0.646937 0.6017451 0.7622222 0.6866829 0.6177059 0.7982607 0.4953175 0.7259123 0.763659 0.802667 0.3040000 0.706488 0.7587692 0.6587273 0.7540772 0.811800 0.770242 0.611456 0.7978415 0.5619740 0.7136274 0.0000000 0.0621014 0.0048000 3.4286e-04 0.01880000 0.0163478 0.331312 0.4547709 0.433532 0.5096862 0.4049778 1 0.6904223 0.7144061 -0.02448465 5 0.532549 0.494886 0.03766325 0.50410308 6.4304e-01 insignificant 1.00000 1.000000 insignificant 0.89227233 4.3431e-01 insignificant 1.00000 1.000000 insignificant 0.02920789 0.53991769 lowCoverage 1.00000 lowCoverage 0.6909159 0.0296010 0.68794861 5 0.574216 0.1803036 0.3939125 2.5007e-38 9.9997e-01 hypermethylated 6.9464e-37 1.0000e+00 hypermethylated 2.2245e-12 9.9991e-01 hypermethylated 6.3559e-11 1.0000e+00 hypermethylated 0.4317487 4.4013e-07 lowCoverage 1.5177e-05 lowCoverage 0.6902319 0.3881402 0.27989603 5 0.5295104 0.4212505 0.10825995 2.1154e-11 8.0246e-01 hypermethylated 1.9231e-09 1.0000e+00 hypermethylated 4.3157e-06 9.6609e-01 hypermethylated 2.8772e-04 1.00000000 hypermethylated 0.1614553 5.1857e-03 weaklyHypermeth 1.5252e-01 insignificant 0.7162162 0.0296392 0.6941001 5 0.527879 0.1923239 0.33555477 5.5757e-31 9.9592e-01 hypermethylated 1.6399e-29 1.0000e+00 hypermethylated 6.0673e-09 9.9909e-01 hypermethylated 1.4798e-07 1.0000000 hypermethylated 0.40254085 1.2784e-06 lowCoverage 4.6503e-05 lowCoverage 0.7185629 0.3881402 3.0429e-01 5 0.4931817 0.4212505 7.1931e-02 1.7066e-09 6.8210e-01 hypermethylated 1.3128e-07 1.0000e+00 hypermethylated 1.7252e-04 9.7275e-01 hypermethylated 6.6353e-03 1.0000e+00 hypermethylated 0.13224742 2.5115e-02 lowCoverage 6.5717e-01 lowCoverage 0.0259740 0.3881402 -3.9916e-01 5 0.1015160 0.4212505 -0.31973451 9.9985e-01 2.4878e-13 hypomethylated 1.0000e+00 7.3172e-12 hypomethylated 1.0000e+00 5.1296e-07 hypomethylated 1.0000000 1.5544e-05 hypomethylated -2.7029e-01 4.2217e-04 lowCoverage 1.2793e-02 lowCoverage chr19 1347250 1348250 52766 ENSG00000176936 0.598279 321 10 0.619210 344 11 0.558464 394 10 0.7812620 383 10 0.6471903 247 10 0.710761 721 12 0.6743291 323 10 0.7013671 366 10 0.6165405 405 10 0.807171 323 10 0.683756 539 11 0.7376371 196 10 0.62326980 389 10 0.553658 225 9 0.7265664 307 10 0.5115372 199 8 0.6398389 105 7 0.7481581 442 9 0.7595145 350 10 0.585099 414 13 0.451653 241 10 0.510567 262 9 0.501645 310 12 0.6302838 264 10 0.579571 319 12 0.8113001 457 11 0.512297 353 11 0.514105 246 11 0.602245 413 9 0.577194 515 10 0.7939213 424 10 0.6436908 489 10 0.1709128 369 11 0.2025066 284 10 0.1657713 321 7 0.1664417 174 7 0.1862252 383 11 0.2458804 428 11 0.670955 276 9 0.7344195 362 10 0.8111046 217 9 0.5826601 265 9 0.5441666 257 11 0.756180 0.5862662 0.585347 0.7322549 0.702530 0.722890 0.7455418 0.7134123 0.682853 0.791488 0.7345562 0.770875 0.7140085 0.7909555 0.7897118 0.7084526 0.5968884 0.6348366 0.7429179 0.653663 0.726603 0.5590700 0.718725 0.6924405 0.6264559 0.7160191 0.624560 0.572401 0.699329 0.6567694 0.5809730 0.7465135 0.1397207 0.1373762 0.1402385 1.2785e-01 0.17352811 0.1777285 0.678860 0.6442305 0.720428 0.6056984 0.6301939 9 0.7267134 0.6615205 0.04744316 10 0.659829 0.478083 0.18174638 0.00099377 1.0000e+00 weaklyHypermeth 0.19875 1.000000 insignificant 0.00399032 1.0000e+00 weaklyHypermeth 0.98528 1.000000 insignificant 0.07014093 0.07710174 insignificant 1.00000 insignificant 0.7276767 0.1546708 0.54361190 10 0.710765 0.1905724 0.5201926 1.1478e-84 1.0000e+00 hypermethylated 1.0434e-82 1.0000e+00 hypermethylated 3.7702e-21 1.0000e+00 hypermethylated 2.0946e-19 1.0000e+00 hypermethylated 0.4745574 2.7185e-16 hypermethylated 9.0615e-14 hypermethylated 0.7281344 0.6666667 0.04623605 9 0.7172195 0.6456674 0.07155215 3.0674e-03 1.2766e-01 weaklyHypermeth 4.5058e-02 1.0000e+00 weaklyHypermeth 2.1084e-02 5.3405e-01 weaklyHypermeth 3.1468e-01 1.00000000 insignificant -0.0044807 9.3465e-01 insignificant 1.0000e+00 insignificant 0.6619059 0.1546708 0.4875167 10 0.507741 0.1905724 0.31716880 4.7603e-49 1.0000e+00 hypermethylated 2.3802e-47 1.0000e+00 hypermethylated 2.9773e-16 1.0000e+00 hypermethylated 1.5670e-14 1.0000000 hypermethylated 0.40441646 1.6609e-08 hypermethylated 1.1072e-06 hypermethylated 0.6637850 0.6666667 2.3830e-03 9 0.6399651 0.6352884 4.6767e-03 8.4078e-01 1.6688e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.1672e-01 3.7135e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.07462162 2.3976e-01 insignificant 1.0000e+00 insignificant 0.1545548 0.6666667 -5.1584e-01 9 0.1765894 0.6456674 -0.46907795 1.0000e+00 3.0329e-33 hypomethylated 1.0000e+00 2.7572e-31 hypomethylated 1.0000e+00 8.6369e-12 hypomethylated 1.0000000 7.1974e-10 hypomethylated -4.7904e-01 3.6187e-04 hypomethylated 1.1673e-02 hypomethylated chr19 1394450 1395450 52770 RPS15 ENSG00000115268 0.721639 272 13 0.651691 247 13 0.608046 193 10 0.8305769 154 10 0.7382752 199 13 0.755853 233 10 0.6497667 163 11 0.7691366 220 13 0.5537185 156 9 0.666085 193 10 0.758558 354 10 0.7913309 91 7 0.67988855 272 13 0.760442 78 7 0.7320005 176 13 0.6910256 63 6 0.7720259 132 7 0.7045275 180 11 0.7567220 125 4 0.723809 212 10 0.909871 107 4 0.814186 59 3 0.843853 214 10 0.7164865 154 10 0.830989 127 10 0.7479718 255 12 0.760526 127 10 0.678205 78 4 0.729224 267 13 0.699304 261 10 0.7702631 256 10 0.7650763 303 10 0.7192144 309 13 0.7402065 163 13 0.7103973 459 13 0.5250000 35 3 0.5583108 151 7 0.6874939 302 10 0.778854 198 10 0.6770787 230 13 0.7637836 162 13 0.7709692 196 10 0.7049562 191 13 0.871037 0.6926148 0.618841 0.8938765 0.840297 0.862286 0.7314962 0.8735949 0.758221 0.842642 0.8639177 0.850267 0.7927023 0.8533333 0.7982253 0.8157220 0.7507946 0.8193549 0.8225289 0.828892 0.936093 0.8264104 0.861530 0.7909376 0.8584298 0.8524815 0.771681 0.792848 0.805817 0.8285938 0.8390487 0.7950280 0.8111984 0.8002832 0.8529386 7.4043e-01 0.76137220 0.8186534 0.865294 0.8491128 0.856241 0.8896178 0.8351361 4 0.7683387 0.8206522 -0.02398972 10 0.721044 0.797020 -0.07597580 0.92971775 4.1013e-03 weaklyHypometh 1.00000 0.315485 insignificant 0.96980290 1.8033e-02 weaklyHypometh 1.00000 0.827451 insignificant -0.05640703 0.02971650 weaklyHypometh 1.00000 insignificant 0.7685660 0.8195913 -0.00156352 11 0.729410 0.7003014 0.0291087 5.5989e-03 7.1198e-01 inconclusive 3.3327e-02 1.0000e+00 inconclusive 1.3616e-02 8.0735e-01 inconclusive 9.3902e-02 1.0000e+00 inconclusive 0.0589854 1.8730e-01 insignificant 1.0000e+00 insignificant 0.7678427 0.7993859 -0.03752474 13 0.6754313 0.6883785 -0.01294727 9.8650e-01 3.1407e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9645e-01 3.2862e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0233724 3.7675e-01 insignificant 1.0000e+00 insignificant 0.8204082 0.8195913 0.0148496 10 0.765792 0.7003014 0.06549107 2.2316e-03 8.9065e-01 weaklyHypermeth 1.5827e-02 1.0000e+00 weaklyHypermeth 1.3563e-03 9.6299e-01 weaklyHypermeth 1.2330e-02 1.0000000 weaklyHypermeth 0.11539244 2.5818e-02 weaklyHypermeth 2.4129e-01 insignificant 0.8206522 0.8000000 -1.3444e-02 10 0.7970201 0.7134957 8.3524e-02 2.9466e-01 2.7987e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.3285e-01 5.3583e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03303466 2.6239e-01 insignificant 1.0000e+00 insignificant 0.8195913 0.8006166 -3.6978e-02 11 0.7003014 0.7463412 -0.04603977 9.7827e-01 1.5953e-02 weaklyHypometh 1.0000e+00 1.0565e-01 insignificant 9.9185e-01 3.5202e-02 weaklyHypometh 1.0000000 2.7362e-01 insignificant -8.2358e-02 9.0433e-02 insignificant 6.3240e-01 insignificant chr19 1403750 1404750 52771 APC2 ENSG00000115266 0.887538 297 10 0.779592 434 15 0.843667 389 10 0.7727574 315 8 0.7444646 283 12 0.788427 416 8 0.7458971 271 9 0.7787298 377 8 0.8578059 303 6 0.814629 330 6 0.893153 360 12 0.7532861 119 6 0.37196369 380 6 0.779626 290 6 0.8114549 360 8 0.9158782 89 5 0.8750000 8 0 0.6846621 374 8 0.4735010 412 9 0.688280 344 8 0.849640 101 9 0.420640 155 6 0.726773 294 11 0.8305580 176 6 0.811396 261 13 0.8670304 545 11 0.830308 241 6 0.805487 183 8 0.876667 408 9 0.569050 581 10 0.7307608 552 10 0.8437790 394 9 0.4128175 323 11 0.3852444 214 9 0.5278888 103 8 0.5197228 90 7 0.5601467 275 8 0.2522814 475 10 0.778099 281 8 0.7848427 333 8 0.3865151 254 8 0.5306187 234 8 0.6280569 241 8 0.782085 0.7848776 0.838492 0.8895155 0.863194 0.867996 0.8479484 0.8817647 0.876670 0.894392 0.8882508 0.873913 0.5983901 0.8736865 0.8215510 0.8918458 0.8800940 0.7865213 0.5662825 0.817722 0.903314 0.3626982 0.873516 0.9083230 0.8902108 0.8557670 0.830462 0.868314 0.904045 0.6488425 0.7944431 0.8978427 0.4762737 0.5166273 0.5892810 5.3836e-01 0.41918019 0.1237343 0.533217 0.5229082 0.459810 0.6215131 0.6849589 6 0.8019528 0.8011334 0.00192383 8 0.763128 0.737253 0.02587518 0.92840221 6.1559e-01 insignificant 1.00000 1.000000 insignificant 0.97312507 6.9073e-01 insignificant 1.00000 1.000000 insignificant -0.00049193 0.99219017 insignificant 1.00000 insignificant 0.8019253 0.4151454 0.40302413 8 0.751512 0.3807964 0.3707151 2.1592e-41 1.0000e+00 hypermethylated 6.9652e-40 1.0000e+00 hypermethylated 7.4301e-13 1.0000e+00 hypermethylated 2.1853e-11 1.0000e+00 hypermethylated 0.3199986 2.4961e-04 hypermethylated 4.8002e-03 hypermethylated 0.8023142 0.5847647 0.24270043 8 0.7870667 0.6168411 0.17022563 1.7187e-12 9.9914e-01 hypermethylated 1.9097e-10 1.0000e+00 hypermethylated 6.3729e-09 9.9810e-01 hypermethylated 5.7936e-07 1.00000000 hypermethylated 0.1413890 1.3950e-01 insignificant 1.0000e+00 insignificant 0.8024340 0.4151454 0.3866579 10 0.794058 0.3807964 0.41326148 4.7429e-31 1.0000e+00 hypermethylated 1.4372e-29 1.0000e+00 hypermethylated 1.0101e-10 1.0000e+00 hypermethylated 2.8059e-09 1.0000000 hypermethylated 0.32049054 2.3934e-04 hypermethylated 4.3516e-03 hypermethylated 0.8011349 0.5858209 2.3832e-01 8 0.7616159 0.6609990 1.0062e-01 8.2155e-09 9.9940e-01 hypermethylated 4.8326e-07 1.0000e+00 hypermethylated 4.3746e-06 9.9827e-01 hypermethylated 3.6455e-04 1.0000e+00 hypermethylated 0.14188094 1.4560e-01 insignificant 1.0000e+00 insignificant 0.4136054 0.5849057 -1.8398e-01 8 0.3426804 0.6357765 -0.29309611 9.9998e-01 2.5682e-05 weaklyHypometh 1.0000e+00 3.0942e-04 weaklyHypometh 9.9812e-01 2.8868e-03 weaklyHypometh 1.0000000 3.7010e-02 weaklyHypometh -1.7861e-01 8.6342e-02 insignificant 6.1623e-01 insignificant chr19 1405350 1406350 52772 APC2 ENSG00000115266 0.576892 366 18 0.432374 245 17 0.472978 294 20 0.7081641 326 18 0.5488567 134 12 0.549984 548 20 0.4619364 253 18 0.6051399 281 17 0.5748899 177 12 0.491540 182 11 0.581313 395 20 0.4865828 177 11 0.53243363 288 20 0.816327 54 3 0.6498602 297 20 0.5850292 131 7 0.6568698 151 14 0.6355510 433 18 0.5409825 272 18 0.721444 406 20 0.726787 118 4 0.533901 260 19 0.473696 301 20 0.5364207 153 19 0.497069 199 14 0.4635444 396 20 0.503914 190 15 0.388083 79 5 0.582158 194 15 0.468353 390 20 0.5175660 401 20 0.5424267 627 20 0.4460483 265 20 0.3735393 336 19 0.4070822 361 20 0.4508722 227 14 0.3989313 169 12 0.6863757 243 18 0.793384 431 18 0.6603172 535 18 0.6101540 464 18 0.6680827 492 20 0.6904682 574 20 0.423989 0.4206741 0.368770 0.6855579 0.507211 0.450451 0.4299059 0.5181030 0.626620 0.429773 0.5645001 0.392011 0.5167140 0.5450194 0.6250110 0.5175536 0.7031105 0.5803272 0.4773860 0.801633 0.708799 0.5222614 0.428168 0.4687469 0.4079625 0.4188053 0.450773 0.495361 0.529173 0.3938391 0.4210384 0.4865263 0.2775614 0.2901997 0.3237629 3.5316e-01 0.32055466 0.7875036 0.806916 0.6287121 0.507365 0.6119413 0.6448025 3 0.5915571 0.5259976 0.04361307 20 0.559483 0.476549 0.08293357 0.00069335 9.5078e-01 weaklyHypermeth 0.17334 1.000000 insignificant 0.03636596 8.9229e-01 weaklyHypermeth 1.00000 1.000000 insignificant 0.06196420 0.06345665 insignificant 1.00000 insignificant 0.5920518 0.4216115 0.12399155 20 0.592345 0.4635418 0.1288032 4.2092e-09 1.0000e+00 weaklyHypermeth 4.3394e-08 1.0000e+00 weaklyHypermeth 1.4258e-06 1.0000e+00 weaklyHypermeth 2.1935e-05 1.0000e+00 weaklyHypermeth 0.1209826 4.9728e-02 weaklyHypermeth 3.7410e-01 insignificant 0.5920785 0.6911058 -0.09693465 18 0.5897860 0.6850812 -0.09529517 1.0000e+00 9.7294e-07 weaklyHypometh 1.0000e+00 2.4323e-04 weaklyHypometh 1.0000e+00 2.3356e-06 weaklyHypometh 1.0000e+00 0.00116778 weaklyHypometh -0.1030238 2.2417e-02 weaklyHypometh 3.4488e-01 insignificant 0.5259976 0.4200627 0.0813990 20 0.476549 0.4131157 0.06343367 1.7631e-05 1.0000e+00 weaklyHypermeth 1.6325e-04 1.0000e+00 weaklyHypermeth 6.5845e-06 1.0000e+00 weaklyHypermeth 1.0288e-04 1.0000000 weaklyHypermeth 0.05901838 2.9388e-01 insignificant 1.0000e+00 insignificant 0.5275925 0.6908581 -1.5703e-01 18 0.4992422 0.6700850 -1.7084e-01 1.0000e+00 3.5195e-13 weaklyHypometh 1.0000e+00 3.5195e-10 weaklyHypometh 1.0000e+00 3.3776e-08 weaklyHypometh 1.0000e+00 3.3776e-05 weaklyHypometh -0.16498802 1.9194e-03 weaklyHypometh 1.3710e-01 insignificant 0.4223759 0.6911058 -2.4462e-01 18 0.4585703 0.6850812 -0.22651090 1.0000e+00 1.3964e-15 hypomethylated 1.0000e+00 4.6545e-14 hypomethylated 1.0000e+00 1.7482e-09 hypomethylated 1.0000000 6.8068e-08 hypomethylated -2.2401e-01 3.5797e-03 weaklyHypometh 5.9661e-02 weaklyHypometh chr19 1791850 1792850 52777 MIR1909 ENSG00000223244 0.896854 214 10 0.845085 281 9 0.720986 292 11 0.8583685 209 11 0.8418711 102 6 0.879303 308 10 0.7483533 163 7 0.8985719 188 10 0.8886937 150 8 0.934198 277 10 0.904039 267 11 0.7044191 143 6 0.91471632 297 10 0.967815 94 6 0.8810493 175 7 0.7000000 38 4 0.8214286 23 3 0.8279780 281 10 0.9285895 252 10 0.892722 233 10 0.757144 112 10 0.836637 155 8 0.814911 217 10 0.7248131 95 8 0.835842 199 7 0.7897012 277 10 0.855017 223 10 0.705956 80 7 0.857308 265 10 0.762161 310 9 0.9319628 290 9 0.8869532 301 10 0.8075407 246 9 0.8872652 255 10 0.7658863 272 9 0.9364848 66 4 0.6584755 148 9 0.8287490 266 10 0.713062 99 9 0.7984581 227 10 0.7959948 94 8 0.8704545 127 7 0.7441725 149 10 0.922496 0.8701707 0.860773 0.8865188 0.913381 0.897324 0.8376739 0.9083006 0.870759 0.921538 0.8953859 0.777862 0.8996862 0.9173116 0.8781326 0.7834646 0.8352588 0.8660872 0.9339238 0.906428 0.926747 0.8144137 0.867962 0.8973485 0.8515001 0.8941783 0.848579 0.827321 0.885824 0.8947226 0.9037456 0.8835977 0.8229037 0.9142085 0.7793369 8.9158e-01 0.83020240 0.9424137 0.862955 0.8534938 0.820048 0.9030512 0.8094928 4 0.8885542 0.8783195 0.00664388 10 0.749988 0.685792 0.06419638 0.91675257 9.9433e-01 insignificant 1.00000 1.000000 insignificant 0.94942675 9.9691e-01 insignificant 1.00000 1.000000 insignificant 0.03955146 0.14227270 insignificant 1.00000 insignificant 0.8887494 0.8747007 0.01335824 10 0.805544 0.6722609 0.1332828 7.3460e-01 9.9577e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.5037e-01 7.7049e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0386851 4.0121e-01 insignificant 1.0000e+00 insignificant 0.8888048 0.8189655 0.06398648 10 0.7992246 0.8166737 -0.01744915 6.4384e-05 9.4120e-01 weaklyHypermeth 1.5703e-03 1.0000e+00 weaklyHypermeth 1.7301e-02 9.4807e-01 weaklyHypermeth 2.7407e-01 1.00000000 insignificant 0.0683236 6.6496e-02 insignificant 7.5118e-01 insignificant 0.8786196 0.8752998 0.0068719 10 0.709016 0.6937935 0.01522219 8.9409e-01 9.5107e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6509e-01 5.4670e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.00086636 9.8486e-01 insignificant 1.0000e+00 insignificant 0.8796333 0.8189655 5.3455e-02 10 0.7925765 0.8166737 -2.4097e-02 6.9858e-03 9.3658e-01 weaklyHypermeth 1.0273e-01 1.0000e+00 insignificant 2.1278e-01 8.9892e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02877217 4.0972e-01 insignificant 1.0000e+00 insignificant 0.8778135 0.8189655 5.5645e-02 10 0.8625580 0.8166737 0.04588428 4.7590e-02 8.0415e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 2.4814e-01 9.8878e-01 insignificant 1.0000000 1.0000e+00 insignificant 2.9639e-02 5.5234e-01 insignificant 1.0000e+00 insignificant chr19 1805950 1806950 52778 MIR1909 ENSG00000079313 0.202255 688 20 0.168870 866 21 0.193815 817 21 0.1862280 625 18 0.1572143 525 21 0.261985 1109 21 0.2417999 848 21 0.1791841 770 21 0.1598842 989 21 0.191670 736 19 0.215567 826 21 0.1596013 753 21 0.16315831 741 21 0.271475 426 10 0.2165369 886 21 0.1604762 576 18 0.0979378 345 18 0.1732936 857 21 0.1071111 744 21 0.161591 844 20 0.112604 287 18 0.096120 354 16 0.209722 796 21 0.1860929 407 20 0.190542 340 18 0.1780219 968 21 0.158015 552 20 0.197071 476 21 0.163231 704 21 0.141195 975 20 0.1750902 925 21 0.1927224 965 21 0.0162834 592 21 0.0222706 509 21 0.0018519 262 8 0.0000000 214 15 0.0307733 595 19 0.0062052 833 21 0.285336 621 20 0.1941277 750 20 0.1536572 479 18 0.3285295 884 20 0.3984743 533 18 0.156408 0.1404563 0.179464 0.2029943 0.177552 0.222171 0.2378529 0.1433240 0.168217 0.178874 0.2323486 0.162297 0.1631401 0.1947953 0.1770918 0.1622448 0.1139870 0.1969353 0.0695230 0.176659 0.104112 0.1125940 0.203642 0.2077989 0.1752572 0.2036187 0.157387 0.159903 0.199228 0.1654914 0.1372860 0.1876247 0.0157605 0.0103738 0.0025767 4.4839e-05 0.01445636 0.0036835 0.220923 0.2012813 0.159762 0.2290896 0.2710187 14 0.2001870 0.2156407 0.00164246 21 0.208487 0.187854 0.02063331 0.05268991 8.9762e-01 insignificant 1.00000 1.000000 insignificant 0.12995126 9.7617e-01 insignificant 1.00000 1.000000 insignificant 0.01678035 0.24187067 insignificant 1.00000 insignificant 0.2001870 0.0163062 0.20797587 21 0.208487 0.0234574 0.1850301 1.1375e-43 1.0000e+00 hypermethylated 3.7918e-42 1.0000e+00 hypermethylated 7.5331e-19 1.0000e+00 hypermethylated 3.6805e-17 1.0000e+00 hypermethylated 0.1705853 5.5482e-14 weaklyHypermeth 6.9353e-12 weaklyHypermeth 0.1998797 0.2237527 -0.04571143 18 0.1825413 0.3387727 -0.15623147 4.4911e-01 9.3818e-11 weaklyHypometh 1.0000e+00 4.6909e-08 weaklyHypometh 8.7263e-01 6.6094e-07 weaklyHypometh 1.0000e+00 0.00066094 weaklyHypometh -0.0885423 1.1695e-01 insignificant 1.0000e+00 insignificant 0.2156407 0.0163062 0.2106014 21 0.187854 0.0234574 0.16439678 1.3862e-31 1.0000e+00 hypermethylated 4.4715e-30 1.0000e+00 hypermethylated 1.0441e-13 1.0000e+00 hypermethylated 3.6004e-12 1.0000000 hypermethylated 0.15380493 6.0729e-10 weaklyHypermeth 6.0729e-08 weaklyHypermeth 0.2156787 0.2237527 -4.1748e-02 18 0.1887017 0.3387727 -1.5007e-01 7.4539e-01 1.7225e-10 weaklyHypometh 1.0000e+00 8.6127e-08 weaklyHypometh 9.6781e-01 4.0251e-06 weaklyHypometh 1.0000e+00 2.0126e-03 weaklyHypometh -0.10532265 7.5547e-02 insignificant 9.4434e-01 insignificant 0.0163170 0.2237527 -2.6294e-01 18 0.0243957 0.3387727 -0.31437705 1.0000e+00 7.8574e-28 hypomethylated 1.0000e+00 5.6124e-26 hypomethylated 1.0000e+00 3.9622e-12 hypomethylated 1.0000000 3.9622e-10 hypomethylated -2.5913e-01 4.0686e-03 weaklyHypometh 6.2593e-02 weaklyHypometh chr19 1810550 1811550 52779 MIR1909 ENSG00000079313 0.243128 72 3 0.082804 80 5 0.192148 111 5 0.3208333 81 3 0.0525476 137 5 0.184086 122 3 0.1003099 133 5 0.2200000 77 5 0.1924701 87 5 0.255995 175 3 0.179300 139 5 0.2322368 115 5 0.14657895 63 3 0.144444 75 3 0.0372966 136 5 0.2073431 160 7 1.0000000 1 0 0.3376068 104 3 0.0380747 139 3 0.193296 147 3 0.131746 80 5 0.000000 10 0 0.224305 100 5 0.0335632 105 5 0.079060 33 3 0.2093321 144 5 0.175487 198 5 0.109890 66 3 0.187195 85 3 0.034563 112 5 0.2233526 91 5 0.3300149 98 3 0.0197650 77 5 0.0000000 117 3 0.1337341 146 5 0.0000000 40 1 0.2094356 79 5 0.2511157 134 5 0.194118 201 4 0.2111244 110 3 0.2882246 65 3 0.3719203 54 3 0.2941176 87 3 0.197913 0.1647285 0.167052 0.1287149 0.124373 0.196377 0.1061370 0.0554217 0.155805 0.122490 0.2481144 0.212878 0.0763475 0.1026328 0.0672276 0.1285753 NA 0.1536059 0.0823841 0.070409 0.143144 0.0000000 0.112071 0.0752897 0.1041860 0.0895676 0.065807 0.124344 0.054812 0.0687913 0.0594951 0.1416537 0.0520930 0.0000000 0.0311628 3.4548e-02 0.10661694 0.0968335 0.027167 0.0392623 0.096888 0.0850904 0.0233877 3 0.1267474 0.0866071 0.04315318 5 0.178168 0.140669 0.03749988 0.02316461 9.9999e-01 weaklyHypermeth 1.00000 1.000000 insignificant 0.05806333 9.9946e-01 insignificant 1.00000 1.000000 insignificant 0.07314923 0.18061278 lowCoverage 1.00000 lowCoverage 0.1272217 0.0541455 0.07444270 5 0.203621 0.1515414 0.0520797 1.3913e-03 9.5653e-01 weaklyHypermeth 9.0345e-03 1.0000e+00 weaklyHypermeth 2.1645e-03 9.9970e-01 weaklyHypermeth 1.8038e-02 1.0000e+00 weaklyHypermeth 0.1156832 9.0981e-02 lowCoverage 5.8698e-01 lowCoverage 0.1274005 0.0776699 0.07842782 3 0.1781685 0.2211645 -0.04299600 8.3701e-03 9.7308e-01 lowCoverage 1.0333e-01 1.0000e+00 lowCoverage 1.6148e-02 9.9513e-01 lowCoverage 2.6220e-01 1.00000000 lowCoverage -0.0538760 3.4306e-01 lowCoverage 1.0000e+00 lowCoverage 0.0866845 0.0541455 0.0344888 5 0.160764 0.1515414 0.00922273 8.1750e-02 8.2264e-01 insignificant 3.9493e-01 1.0000e+00 insignificant 5.2066e-02 9.3143e-01 insignificant 3.1747e-01 1.0000000 insignificant 0.04253399 4.4799e-01 lowCoverage 1.0000e+00 lowCoverage 0.0867621 0.0725490 3.8898e-02 3 0.1875581 0.1698860 1.7672e-02 1.7700e-01 9.7625e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 2.4461e-01 9.9756e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.12702520 1.3391e-02 lowCoverage 4.3285e-01 lowCoverage 0.0542373 0.0725490 5.9116e-03 3 0.1767983 0.1698860 0.00691231 7.1912e-01 7.7304e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.8862e-01 8.4517e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage -1.6956e-01 1.4786e-02 lowCoverage 1.7193e-01 lowCoverage chr19 1982750 1983750 52780 BTBD2 ENSG00000133243 0.567100 177 10 0.413613 210 11 0.434441 178 10 0.6157507 134 6 0.5392692 113 5 0.756904 243 11 0.5726343 161 8 0.5520929 197 9 0.4301709 126 7 0.653124 107 8 0.622405 271 11 0.5369792 63 8 0.23390808 191 8 0.607639 41 2 0.5337054 160 8 0.4254535 54 6 0.2558665 118 7 0.2938476 132 10 0.2321450 177 11 0.390229 173 10 0.819318 75 6 0.450572 95 7 0.722082 112 9 0.2905093 64 4 0.377020 222 7 0.4017996 247 11 0.559123 120 11 0.647383 59 2 0.490909 121 10 0.536430 231 9 0.2595143 266 11 0.7070475 259 11 0.0514069 228 10 0.0749311 254 11 0.1111111 232 8 0.0104167 205 10 0.1266264 215 9 0.0722602 350 11 0.390919 198 11 0.2822447 317 11 0.3961049 111 9 0.4424953 188 8 0.3140304 284 11 0.624344 0.4342058 0.457333 0.6400554 0.569018 0.740673 0.5591741 0.5613318 0.435087 0.614147 0.6604859 0.597545 0.1806679 0.5430036 0.4755001 0.5569323 0.2813797 0.3177372 0.1804472 0.522464 0.788675 0.3711849 0.758027 0.5287868 0.3927964 0.4743607 0.599881 0.561707 0.513244 0.5492632 0.2423087 0.7153502 0.0225376 0.0269619 0.0279474 1.5046e-02 0.07223764 0.0238406 0.346119 0.3650872 0.368287 0.4521269 0.3003613 2 0.4755291 0.5312667 -0.03327928 10 0.443820 0.473056 -0.02923570 0.98420108 4.4200e-01 insignificant 1.00000 1.000000 insignificant 0.99555753 4.2050e-01 insignificant 1.00000 1.000000 insignificant -0.03844502 0.53497797 insignificant 1.00000 insignificant 0.4755291 0.0579906 0.44284378 10 0.443820 0.0587917 0.3850284 1.8002e-32 1.0000e+00 hypermethylated 4.7374e-31 1.0000e+00 hypermethylated 1.3930e-21 1.0000e+00 hypermethylated 8.7064e-20 1.0000e+00 hypermethylated 0.4089052 8.0605e-11 hypermethylated 5.3737e-09 hypermethylated 0.4756864 0.3324226 0.13345270 10 0.4841674 0.3453280 0.13883940 3.8876e-05 1.0000e+00 weaklyHypermeth 1.0799e-03 1.0000e+00 weaklyHypermeth 1.5955e-04 9.9973e-01 weaklyHypermeth 5.9093e-03 1.00000000 weaklyHypermeth 0.1182051 1.7034e-02 weaklyHypermeth 2.9370e-01 insignificant 0.5312667 0.0579906 0.4842051 11 0.473056 0.0587917 0.41426407 1.0485e-28 1.0000e+00 hypermethylated 2.9959e-27 1.0000e+00 hypermethylated 8.7220e-16 1.0000e+00 hypermethylated 4.1533e-14 1.0000000 hypermethylated 0.44735020 1.3021e-06 hypermethylated 4.6503e-05 hypermethylated 0.5321199 0.3324226 1.6122e-01 11 0.5160609 0.3453280 1.7073e-01 1.1432e-05 1.0000e+00 weaklyHypermeth 3.5725e-04 1.0000e+00 weaklyHypermeth 2.7928e-04 9.9990e-01 weaklyHypermeth 9.9743e-03 1.0000e+00 weaklyHypermeth 0.15665013 1.7752e-02 weaklyHypermeth 5.0719e-01 insignificant 0.0580689 0.3324226 -3.0367e-01 11 0.0641364 0.3453280 -0.28119154 1.0000e+00 1.1190e-24 hypomethylated 1.0000e+00 6.2168e-23 hypomethylated 1.0000e+00 4.6166e-12 hypomethylated 1.0000000 4.1969e-10 hypomethylated -2.9070e-01 8.2684e-05 hypomethylated 3.9374e-03 hypomethylated chr19 1992850 1993850 52781 BTBD2 ENSG00000133243 0.208997 1454 44 0.178256 1304 43 0.190053 1386 44 0.2214938 1496 41 0.1862282 1114 42 0.295176 1784 43 0.2668849 1616 43 0.1790677 1256 43 0.1993141 1400 43 0.301171 1407 43 0.265490 1627 43 0.2540957 1288 43 0.21964602 1380 43 0.411312 682 27 0.2104601 1648 43 0.2400906 1082 45 0.2343601 608 25 0.2283602 2756 42 0.1919696 1532 43 0.223643 1602 43 0.237559 770 38 0.172823 883 34 0.256844 1110 44 0.2282077 638 42 0.217287 863 34 0.2170728 1775 43 0.188756 1301 41 0.202932 732 38 0.203413 1335 43 0.197137 1597 39 0.1662904 1685 44 0.2548280 1853 44 0.1264446 1239 43 0.1775629 1355 42 0.1765432 1232 39 0.1899077 359 30 0.2016950 852 37 0.1759116 1897 43 0.176650 1436 44 0.1833423 1761 44 0.1965456 1293 36 0.2027561 2064 44 0.1992812 1162 42 0.232079 0.1847478 0.214753 0.2474429 0.220459 0.280643 0.2838083 0.2162904 0.222196 0.242274 0.2899454 0.262257 0.1859803 0.2599015 0.2178964 0.2198837 0.2125129 0.2329798 0.1694133 0.213115 0.290683 0.1758379 0.272848 0.2258797 0.2498497 0.2217434 0.207440 0.257363 0.219511 0.2027439 0.1671856 0.3041191 0.1384680 0.1593426 0.1542863 1.4920e-01 0.22293693 0.1526159 0.180470 0.2186941 0.194918 0.1962712 0.1987915 33 0.1966982 0.2153677 0.00768216 43 0.304055 0.210223 0.09383125 0.29328974 9.9767e-01 insignificant 1.00000 1.000000 insignificant 0.14769251 9.9947e-01 insignificant 1.00000 1.000000 insignificant 0.02337429 0.12671540 insignificant 1.00000 insignificant 0.1961876 0.1712349 0.05447235 43 0.258205 0.1985891 0.0596161 3.1260e-24 2.4212e-21 weaklyHypermeth 6.6510e-23 1.2106e-18 weaklyHypermeth 3.1120e-08 2.2553e-07 weaklyHypermeth 6.4832e-07 7.5178e-05 weaklyHypermeth 0.0606260 1.3592e-03 weaklyHypermeth 1.9988e-02 weaklyHypermeth 0.1960750 0.1516723 0.02696762 43 0.2507513 0.2084551 0.04229621 3.0924e-06 2.4433e-01 weaklyHypermeth 9.9756e-05 1.0000e+00 weaklyHypermeth 2.3502e-05 9.2697e-01 weaklyHypermeth 1.0683e-03 1.00000000 weaklyHypermeth 0.0435883 3.2177e-03 weaklyHypermeth 1.1492e-01 insignificant 0.2153793 0.1711855 0.0549781 43 0.206535 0.1951051 0.01142955 1.1288e-09 1.7015e-06 weaklyHypermeth 1.4293e-08 2.8358e-04 weaklyHypermeth 5.1065e-05 6.2718e-05 weaklyHypermeth 6.4639e-04 0.0209059 weaklyHypermeth 0.03725167 1.7748e-02 weaklyHypermeth 1.7400e-01 insignificant 0.2154525 0.1516723 2.0446e-02 43 0.2214203 0.2084551 1.2965e-02 8.5449e-02 8.4246e-01 insignificant 7.9859e-01 1.0000e+00 insignificant 3.2298e-02 9.5891e-01 weaklyHypermeth 4.5804e-01 1.0000e+00 insignificant 0.02021404 5.6700e-02 insignificant 8.7854e-01 insignificant 0.1709254 0.1515702 -1.1953e-02 43 0.1909621 0.1958857 -0.00492363 3.2796e-04 2.4608e-03 weaklyHypometh 3.6440e-02 2.0644e-02 weaklyHypometh 3.8710e-03 4.1082e-01 inconclusive 0.5692438 1.0000e+00 insignificant -1.7038e-02 1.8560e-01 insignificant 1.0000e+00 insignificant chr19 2121450 2122450 52785 DOT1L ENSG00000104885 0.688974 321 4 0.781788 194 6 0.759655 108 5 0.8041023 286 6 0.9228095 97 4 0.934967 412 5 0.8351765 180 5 0.8770853 154 5 0.7609194 99 4 0.941964 36 2 0.853307 256 6 0.9841270 27 2 0.88071188 100 5 0.800623 92 6 0.8049709 69 5 1.0000000 9 0 NA 0 0 0.9330255 381 4 0.7810676 257 5 0.742526 271 5 0.858147 80 5 0.500000 2 0 0.782616 152 5 0.7017112 127 6 0.962194 103 4 0.8826362 271 6 0.732994 163 5 0.863095 31 3 0.867063 236 5 0.909146 234 6 0.8040025 271 6 0.9149334 308 6 0.8526771 171 5 0.7540616 230 6 0.9978022 359 6 1.0000000 32 4 0.9328571 199 6 0.9013044 322 6 0.733163 295 5 0.8513498 340 6 0.8682306 259 5 0.8968323 304 4 0.7451441 280 6 0.856804 0.7628567 0.725672 0.8099353 0.909530 0.924594 0.8383667 0.8705853 0.854107 0.835165 0.8651678 0.941392 0.8260470 0.7901819 0.8922801 0.9511070 NA 0.9206760 0.7962076 0.889986 0.871568 0.8153698 0.947049 0.8270542 0.9191155 0.8924623 0.744727 0.803114 0.829984 0.8637988 0.8383683 0.8864910 0.8793725 0.8758026 0.9981403 9.5532e-01 0.95362637 0.9533861 0.858820 0.8543558 0.838074 0.8806088 0.8773087 1 0.8334828 0.8431968 -0.00453308 5 0.872484 0.883122 -0.01063821 0.92102217 7.4137e-01 insignificant 1.00000 1.000000 insignificant 0.74367121 8.9061e-01 insignificant 1.00000 1.000000 insignificant 0.03184801 0.45134359 lowCoverage 1.00000 lowCoverage 0.8334330 0.9230183 -0.07236641 5 0.872484 0.7889685 0.0835152 9.9938e-01 2.4164e-05 weaklyHypometh 1.0000e+00 2.7470e-03 weaklyHypometh 9.9740e-01 8.7691e-04 weaklyHypometh 1.0000e+00 1.4615e-01 insignificant -0.0597241 2.0488e-01 lowCoverage 1.0000e+00 lowCoverage 0.8329848 0.8307380 0.00908796 5 0.7897095 0.7437755 0.04593402 8.7161e-01 3.7730e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.2730e-01 5.9276e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0277822 4.9919e-01 lowCoverage 1.0000e+00 lowCoverage 0.8426113 0.9237805 -0.0669090 6 0.740265 0.9318256 -0.19156087 9.9875e-01 5.6683e-04 weaklyHypometh 1.0000e+00 6.2982e-02 weaklyHypometh 9.9999e-01 1.5701e-03 weaklyHypometh 1.0000e+00 0.3492748 insignificant -0.09157216 1.0508e-01 lowCoverage 6.9131e-01 lowCoverage 0.8426113 0.8310719 1.1643e-02 5 0.7402648 0.7419971 -1.7323e-03 5.1440e-01 2.9889e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.5590e-01 2.7805e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00406578 9.3543e-01 lowCoverage 1.0000e+00 lowCoverage 0.9230769 0.8306233 7.0215e-02 5 0.8153474 0.7117474 0.10359997 4.7733e-03 9.9949e-01 weaklyHypermeth 2.8853e-01 1.0000e+00 insignificant 7.0109e-02 9.9872e-01 insignificant 1.0000000 1.0000e+00 insignificant 8.7506e-02 1.1917e-01 insignificant 7.7383e-01 insignificant chr19 2121750 2122750 52786 DOT1L ENSG00000104885 0.678623 368 10 0.590094 248 11 0.658268 212 10 0.7587584 422 11 0.7170699 75 6 0.743612 387 10 0.8777211 75 6 0.7060995 115 6 0.7299661 224 10 0.827130 293 9 0.710065 242 11 0.6081620 220 9 0.71321251 361 9 0.800557 171 10 0.7821081 286 10 0.8777365 137 5 0.8379630 64 8 0.7200232 687 10 0.6432897 222 10 0.674390 374 10 0.589262 87 6 0.677204 198 8 0.728182 136 6 0.6466240 156 11 0.814885 343 11 0.6910890 345 11 0.658523 203 11 0.671332 169 9 0.694956 260 10 0.819517 328 11 0.6195405 298 7 0.8256331 304 7 0.7006705 194 6 0.7313152 263 11 0.6943182 227 10 0.7779930 97 10 0.6312426 219 12 0.8199144 248 7 0.705114 325 10 0.7344045 263 11 0.6847333 340 10 0.6424192 376 10 0.5051924 325 11 0.842632 0.6522304 0.593458 0.7799390 0.729321 0.831701 0.8432935 0.7107670 0.728408 0.834796 0.8750750 0.478563 0.6907448 0.7862396 0.8618233 0.8499318 0.6559993 0.6406252 0.6725283 0.832007 0.849509 0.6171020 0.798153 0.8391125 0.7040669 0.7886264 0.652204 0.763607 0.809979 0.8399991 0.7607484 0.8407464 0.7701695 0.6316794 0.4426601 5.4325e-01 0.58843563 0.8410721 0.646763 0.6219920 0.634521 0.5485973 0.5428313 5 0.7291144 0.7618542 -0.03706914 10 0.669944 0.676800 -0.00685559 0.92642844 1.1385e-01 insignificant 1.00000 1.000000 insignificant 0.71231216 1.3091e-01 insignificant 1.00000 1.000000 insignificant 0.02968027 0.32057576 insignificant 1.00000 insignificant 0.7291144 0.7209302 0.01283053 10 0.669944 0.6775084 -0.0075643 4.8733e-01 1.2141e-03 inconclusive 1.0000e+00 8.5335e-02 inconclusive 7.7482e-01 9.5687e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0068335 8.3908e-01 insignificant 1.0000e+00 insignificant 0.7291144 0.5663391 0.13253238 10 0.6699441 0.6016044 0.06833974 3.9608e-04 8.9466e-01 weaklyHypermeth 7.2552e-03 1.0000e+00 weaklyHypermeth 4.0835e-03 9.5058e-01 weaklyHypermeth 8.9475e-02 1.00000000 weaklyHypermeth 0.0783698 1.2820e-01 insignificant 1.0000e+00 insignificant 0.7615847 0.7211538 0.0486711 11 0.628457 0.7005435 -0.07208664 5.0778e-01 3.6630e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.6661e-01 4.3809e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.02284679 5.3202e-01 insignificant 1.0000e+00 insignificant 0.7615847 0.5659914 1.6968e-01 10 0.6284569 0.5586327 6.9824e-02 7.5547e-05 9.9737e-01 weaklyHypermeth 1.8887e-03 1.0000e+00 weaklyHypermeth 3.3260e-04 9.9669e-01 weaklyHypermeth 1.1087e-02 1.0000e+00 weaklyHypermeth 0.04868955 3.2835e-01 insignificant 1.0000e+00 insignificant 0.7211538 0.5659914 1.4694e-01 10 0.7005435 0.5586327 0.14191087 7.2389e-03 9.9837e-01 weaklyHypermeth 4.0216e-01 1.0000e+00 insignificant 2.5407e-02 1.0000e+00 weaklyHypermeth 1.0000000 1.0000e+00 insignificant 7.1536e-02 1.8226e-01 insignificant 1.0000e+00 insignificant chr19 2295950 2296950 52787 LSM7 ENSG00000130332 0.899291 242 5 0.817542 230 5 0.868763 237 5 0.9396120 248 5 0.8601764 152 5 0.883048 296 5 0.8657764 266 5 0.8578073 151 5 0.8138283 311 5 0.928079 292 5 0.841941 236 5 0.8936256 304 5 0.90848559 319 5 0.890186 182 3 0.8894913 324 5 0.9120304 210 5 0.7444494 1321 5 0.9010142 292 5 0.8668962 227 5 0.876014 270 5 0.899048 84 5 0.801923 123 4 0.754160 251 5 0.8032435 186 5 0.685275 91 3 0.9567827 243 5 0.812535 231 5 0.813632 153 5 0.890955 221 5 0.913858 264 5 0.9512787 190 5 0.8911265 319 5 0.8003403 173 5 0.9368205 131 5 0.0724638 49 1 1.0000000 49 5 0.8239609 241 5 0.8470569 251 5 0.911108 260 5 0.9310390 276 5 0.9587386 238 4 0.8981679 273 5 0.8176560 289 5 0.860254 0.8026199 0.877436 0.9462209 0.841018 0.885411 0.8551653 0.8808836 0.831917 0.926340 0.8699960 0.887024 0.9284715 0.8869747 0.9239648 0.8831684 0.7466740 0.8966596 0.8666538 0.879300 0.925858 0.8346632 0.825658 0.8082856 0.7825920 0.9320104 0.866420 0.811058 0.907450 0.8975638 0.9663216 0.8820970 0.7725386 0.9668069 0.4113371 1.0000e+00 0.85738008 0.8663712 0.914775 0.9360376 0.935208 0.9269101 0.8823215 4 0.8531915 0.8713922 -0.01930189 5 0.860395 0.860286 0.00010913 0.11763654 3.6999e-01 insignificant 1.00000 1.000000 insignificant 0.30771704 8.0484e-01 insignificant 1.00000 1.000000 insignificant 0.02508474 0.34678712 lowCoverage 1.00000 lowCoverage 0.8531915 0.8255034 0.02773295 5 0.860395 0.8251931 0.0352016 9.8597e-03 2.8323e-01 weaklyHypermeth 5.5704e-02 1.0000e+00 weaklyHypermeth 6.3804e-01 1.8883e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.1261291 4.0432e-01 lowCoverage 1.0000e+00 lowCoverage 0.8531915 0.9221557 -0.06895391 5 0.8603948 0.9025298 -0.04213509 9.2780e-01 4.4991e-02 weaklyHypometh 1.0000e+00 7.6257e-01 insignificant 9.8975e-01 8.9909e-03 weaklyHypometh 1.0000e+00 0.40867853 insignificant -0.0304391 2.8542e-01 lowCoverage 1.0000e+00 lowCoverage 0.8713922 0.8255034 0.0444829 5 0.860286 0.8251931 0.03509251 2.0122e-01 7.1288e-01 insignificant 8.7603e-01 1.0000e+00 insignificant 8.1462e-01 3.6520e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.10104436 5.0203e-01 lowCoverage 1.0000e+00 lowCoverage 0.8713922 0.9221557 -4.3896e-02 5 0.8602856 0.9025298 -4.2244e-02 9.8928e-01 1.4402e-02 weaklyHypometh 1.0000e+00 5.3341e-01 insignificant 9.9674e-01 1.4176e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.05552381 1.2519e-01 lowCoverage 1.0000e+00 lowCoverage 0.8255034 0.9221557 -8.5993e-02 5 0.8251931 0.9025298 -0.07733672 7.8175e-01 2.7911e-02 weaklyHypometh 1.0000e+00 1.7019e-01 insignificant 8.2472e-01 2.5843e-01 insignificant 1.0000000 1.0000e+00 insignificant -1.5657e-01 3.1260e-01 lowCoverage 1.0000e+00 lowCoverage chr19 2419450 2420450 52788 LMNB2 ENSG00000176619 0.708429 264 8 0.444444 40 5 0.401656 98 4 0.5514762 94 6 0.4272727 56 4 0.665476 86 7 0.4040577 72 4 0.5000000 16 1 0.4849928 44 4 0.480556 27 3 0.535185 44 3 0.5313131 43 4 0.44444444 54 4 0.405737 86 4 0.5912088 56 4 0.4285714 30 4 0.4712684 679 3 0.4388167 128 8 0.5625000 13 0 0.492191 79 7 0.571429 7 0 NA 0 0 0.424242 54 4 0.6285714 45 5 0.395833 16 0 0.5007937 51 7 0.576211 55 5 0.750000 15 0 0.712345 93 4 0.539583 58 6 0.4571429 53 7 0.5144231 57 4 0.1759259 36 3 0.4761905 26 3 0.3229167 54 3 0.4444444 29 1 0.3796232 68 7 0.4444444 26 3 0.708458 307 11 0.5173160 65 3 0.6969423 264 11 0.4081140 62 5 0.5983363 133 9 0.902155 0.6785714 0.721532 0.7535714 0.603896 0.825000 0.6910189 0.5714286 0.641775 0.582143 0.7321429 0.572727 0.7857143 0.7110634 0.6197802 0.7857143 0.7300438 0.6316945 0.6785714 0.846154 0.659377 NA 0.523810 0.7397959 0.6950913 0.6369048 0.825549 0.785714 0.815883 0.6750000 0.5500000 0.8118132 0.0892857 0.5714286 0.6373876 6.4286e-01 0.55300949 0.5000000 0.889624 0.8571429 0.834481 0.3612782 0.7847339 0 0.6416709 0.5972222 0.01795844 4 0.553339 0.510813 0.04252574 0.56205958 4.9793e-01 lowCoverage 1.00000 1.000000 lowCoverage 0.95167945 2.3202e-01 lowCoverage 1.00000 1.000000 lowCoverage -0.05339057 0.18700991 lowCoverage 1.00000 lowCoverage 0.7163531 0.3849372 0.16488666 0 0.522523 0.3840391 0.1384837 2.8079e-04 9.9928e-01 noCoverage 1.9774e-03 1.0000e+00 noCoverage 5.0468e-02 9.9364e-01 noCoverage 3.0220e-01 1.0000e+00 noCoverage 0.1245556 4.0368e-02 lowCoverage 3.1506e-01 lowCoverage 0.6443890 0.7545126 -0.09546385 6 0.5800051 0.6278294 -0.04782431 1.3553e-03 2.6932e-04 weaklyHypometh 2.1513e-02 2.2444e-02 weaklyHypometh 9.5252e-01 7.9880e-02 insignificant 1.0000e+00 1.00000000 insignificant -0.0873535 2.0329e-01 lowCoverage 1.0000e+00 lowCoverage 0.6029412 0.3849372 0.1479627 0 0.532936 0.3840391 0.14889695 7.3604e-03 9.9989e-01 noCoverage 4.6585e-02 1.0000e+00 noCoverage 2.2757e-02 9.9989e-01 noCoverage 1.6139e-01 1.0000000 noCoverage 0.17794620 1.0039e-02 lowCoverage 1.0912e-01 lowCoverage 0.6000000 0.7613065 -1.3879e-01 4 0.5345234 0.6326517 -9.8128e-02 9.2005e-01 4.8876e-03 lowCoverage 1.0000e+00 3.5583e-01 lowCoverage 8.5099e-01 4.9371e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.03396296 6.2174e-01 lowCoverage 1.0000e+00 lowCoverage 0.3849372 0.7979967 -2.9414e-01 0 0.3840391 0.6291813 -0.24514218 9.9997e-01 1.1593e-03 noCoverage 1.0000e+00 1.0937e-02 noCoverage 9.9983e-01 7.4825e-02 noCoverage 1.0000000 4.9553e-01 noCoverage -2.1191e-01 1.8927e-02 lowCoverage 2.0352e-01 lowCoverage chr19 2441650 2442650 52789 GADD45B ENSG00000099860 0.766201 356 9 0.799522 319 9 0.849033 229 9 0.9241182 476 9 0.8820895 133 9 0.863387 466 9 0.7699052 171 9 0.9082385 221 9 0.7594403 347 9 0.747517 257 9 0.763152 309 9 0.8521274 118 5 0.80768322 399 9 0.899850 187 9 0.8955392 261 9 0.8525298 94 5 0.8207058 92 8 0.6921238 567 9 0.8646793 149 9 0.809638 373 9 0.637394 79 5 0.864615 196 9 0.868455 268 9 0.7673773 145 5 0.794302 167 8 0.9187570 368 9 0.560049 177 8 0.790432 161 9 0.882712 224 9 0.879306 348 9 0.9140492 290 9 0.9055123 472 9 0.4380219 245 9 0.2378197 239 9 0.1111111 189 8 0.3489822 133 8 0.4638631 220 9 0.6101421 257 9 0.777370 451 9 0.8670420 403 9 0.8528006 396 9 0.8903937 377 9 0.8312168 409 9 0.901558 0.8067372 0.838184 0.9153874 0.935459 0.851686 0.8391130 0.8752418 0.785292 0.922651 0.8287739 0.817841 0.8660749 0.8812382 0.8838391 0.8985322 0.8306248 0.8060349 0.9048723 0.887397 0.808021 0.8365298 0.875375 0.8268622 0.8500189 0.9091576 0.719410 0.812795 0.876428 0.8596721 0.8878364 0.9029486 0.3322853 0.1736461 0.0833017 2.7195e-01 0.50074273 0.5972035 0.856303 0.8468672 0.825026 0.9244052 0.8190794 9 0.8614883 0.8594128 0.00089928 9 0.721414 0.722662 -0.00124766 0.08744280 6.3359e-01 insignificant 1.00000 1.000000 insignificant 0.24945173 7.9255e-01 insignificant 1.00000 1.000000 insignificant 0.01112735 0.75989822 insignificant 1.00000 insignificant 0.8622190 0.4037412 0.46697749 9 0.700581 0.3672900 0.3332908 1.8916e-56 9.9720e-01 hypermethylated 7.8815e-55 1.0000e+00 hypermethylated 2.5304e-16 9.8912e-01 hypermethylated 8.7257e-15 1.0000e+00 hypermethylated 0.4580507 1.1847e-03 weaklyHypermeth 1.7949e-02 weaklyHypermeth 0.8616443 0.8600196 -0.00063323 9 0.7869972 0.8170334 -0.03003620 8.0870e-01 9.8039e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 6.5608e-01 1.4758e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0173906 4.8355e-01 insignificant 1.0000e+00 insignificant 0.8595642 0.4043716 0.4536727 9 0.720176 0.4006800 0.31949647 2.3276e-32 9.9794e-01 hypermethylated 8.0263e-31 1.0000e+00 hypermethylated 5.7368e-13 9.9909e-01 hypermethylated 1.8506e-11 1.0000000 hypermethylated 0.44692337 7.2599e-04 hypermethylated 1.0836e-02 hypermethylated 0.8597097 0.8600196 -4.7712e-04 9 0.7883583 0.8170334 -2.8675e-02 4.0661e-01 7.3285e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 4.5654e-01 7.4902e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02851790 4.6533e-01 insignificant 1.0000e+00 insignificant 0.4039062 0.8606598 -4.9018e-01 9 0.3407480 0.8387367 -0.49798874 9.9888e-01 1.5384e-18 hypomethylated 1.0000e+00 5.6979e-17 hypomethylated 9.9405e-01 7.0573e-10 hypomethylated 1.0000000 3.2079e-08 hypomethylated -4.7544e-01 8.5968e-04 hypomethylated 2.1750e-02 hypomethylated chr19 2443550 2444550 52790 GADD45B ENSG00000099860 0.909829 117 3 0.783757 118 7 0.784955 59 4 0.9592545 119 6 0.7956349 24 1 0.900485 120 5 0.8253968 43 6 0.9398148 59 6 0.8611111 21 1 0.966667 20 1 0.845528 142 6 0.7857143 10 0 0.85128205 24 1 0.900000 13 1 0.9629630 29 1 0.7000000 8 1 1.0000000 1 0 0.9308905 79 3 0.9753247 63 3 0.889468 110 7 0.805556 26 3 0.875000 34 3 0.940476 53 1 0.8200000 23 3 0.795744 89 5 0.9523970 137 7 0.821111 47 3 0.980769 19 1 0.862845 70 3 0.918367 131 7 0.8608131 123 7 0.8136364 126 6 0.8435953 102 7 0.8269725 52 6 0.8597403 93 6 1.0000000 53 2 0.5317460 50 3 0.9445935 110 7 0.957557 93 6 0.9848928 148 6 0.9941691 109 6 0.9603175 73 3 0.8272828 136 6 0.945223 0.7772995 0.804650 0.9660528 0.858879 0.937674 0.9255952 0.9050926 0.913194 0.874017 0.8965438 1.000000 0.8872863 0.9479167 0.8750000 0.7701965 NA 0.9310065 0.9583874 0.868634 0.982639 0.9322917 0.918403 0.9434271 0.8330369 0.9543168 0.809954 0.927934 0.899291 0.9233631 0.9451650 0.9040720 0.8839962 0.7887999 0.8581439 1.0000e+00 0.83184524 0.9110260 0.909269 0.9744761 0.977041 0.9687500 0.9633413 1 0.8871925 0.8993135 -0.01369451 5 0.787791 0.798579 -0.01078782 0.94207459 6.7485e-01 insignificant 1.00000 1.000000 insignificant 0.78538627 8.3691e-01 insignificant 1.00000 1.000000 insignificant 0.00784414 0.76273496 lowCoverage 1.00000 lowCoverage 0.8870008 0.8728070 0.01576944 5 0.761265 0.7566633 0.0046018 4.9260e-01 7.4346e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.0893e-01 9.1625e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0439625 5.4702e-01 lowCoverage 1.0000e+00 lowCoverage 0.8877551 0.9588551 -0.06639071 5 0.8700172 0.9358024 -0.06578513 9.9664e-01 2.3711e-03 weaklyHypometh 1.0000e+00 1.1291e-01 insignificant 9.9873e-01 2.6377e-02 weaklyHypometh 1.0000e+00 0.64338151 insignificant -0.0664401 1.0005e-01 lowCoverage 9.4386e-01 lowCoverage 0.8982857 0.8708972 0.0304192 6 0.770801 0.6725896 0.09821160 4.8204e-02 5.7247e-01 weaklyHypermeth 2.4345e-01 1.0000e+00 insignificant 2.6674e-01 8.3592e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.03611837 6.1913e-01 lowCoverage 1.0000e+00 lowCoverage 0.9010357 0.9588551 -5.6335e-02 5 0.8838873 0.9358024 -5.1915e-02 9.9579e-01 9.8998e-03 weaklyHypometh 1.0000e+00 4.3699e-01 insignificant 9.9962e-01 2.5057e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.07428420 7.2880e-02 lowCoverage 9.4434e-01 lowCoverage 0.8766520 0.9588551 -7.5562e-02 6 0.8647581 0.9358024 -0.07104429 9.5690e-01 2.4053e-03 weaklyHypometh 1.0000e+00 2.0384e-02 weaklyHypometh 9.9744e-01 3.5056e-02 weaklyHypometh 1.0000000 2.7362e-01 insignificant -1.1040e-01 1.7407e-01 insignificant 1.0000e+00 insignificant chr19 2454550 2455550 52791 ENSG00000209575 0.720999 143 8 0.422025 246 11 0.478335 199 10 0.6033997 154 8 0.5052947 168 9 0.736889 183 11 0.3806146 177 9 0.4719297 228 10 0.5272273 159 10 0.419802 93 5 0.561471 293 11 0.6922382 144 5 0.57554380 155 9 0.766667 20 1 0.5007696 147 9 0.5636034 101 5 0.5233394 118 5 0.1960740 131 4 0.6315282 244 10 0.377331 97 5 0.673310 70 4 0.692424 60 5 0.531316 159 10 0.6011066 78 7 0.572319 256 7 0.4983877 268 11 0.441295 107 10 0.464583 46 4 0.583155 193 11 0.524675 246 11 0.5607248 271 11 0.7301249 237 11 0.1109013 246 11 0.1635992 231 11 0.0283416 414 11 0.0554564 213 6 0.0861985 155 10 0.0370962 323 11 0.597263 127 7 0.5471731 199 11 0.3337798 107 8 0.7715618 25 2 0.5584102 137 8 0.723091 0.3626998 0.395808 0.6318840 0.425593 0.676800 0.4244155 0.4775189 0.411510 0.405199 0.5404330 0.573556 0.4430284 0.5896356 0.4770907 0.3761057 0.4378665 0.2431924 0.4896048 0.381615 0.675570 0.4898773 0.613771 0.7141823 0.4121253 0.3461944 0.429060 0.439674 0.439466 0.3867086 0.4438418 0.6902303 0.1081207 0.1348096 0.0265465 5.3287e-02 0.15948110 0.0330969 0.500085 0.5363568 0.324983 NA 0.5229413 2 0.5284375 0.5438066 -0.02782617 10 0.500602 0.601099 -0.10049748 0.99915251 2.6984e-01 insignificant 1.00000 1.000000 insignificant 0.98237936 6.7971e-01 insignificant 1.00000 1.000000 insignificant -0.04003114 0.33173958 insignificant 1.00000 insignificant 0.5282901 0.0752212 0.45793671 10 0.462187 0.0538980 0.4082887 1.7644e-49 1.0000e+00 hypermethylated 6.3014e-48 1.0000e+00 hypermethylated 8.9334e-19 1.0000e+00 hypermethylated 4.0606e-17 1.0000e+00 hypermethylated 0.4524885 2.5714e-11 hypermethylated 1.8367e-09 hypermethylated 0.5284553 0.5656566 -0.02409664 7 0.5007022 0.5083349 -0.00763273 6.6861e-01 6.0601e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.4318e-01 9.0914e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0288835 7.1927e-01 insignificant 1.0000e+00 insignificant 0.5435768 0.0752212 0.4838838 11 0.570415 0.0538980 0.51651673 3.8099e-43 1.0000e+00 hypermethylated 1.6565e-41 1.0000e+00 hypermethylated 9.9242e-19 1.0000e+00 hypermethylated 7.6340e-17 1.0000000 hypermethylated 0.49251963 1.4564e-10 hypermethylated 1.8205e-08 hypermethylated 0.5428427 0.5663866 1.8715e-03 8 0.4934916 0.5461553 -5.2664e-02 4.4697e-01 9.4082e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.7587e-01 9.7126e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01114762 8.8671e-01 insignificant 1.0000e+00 insignificant 0.0753165 0.5656566 -4.6517e-01 8 0.0583894 0.5083349 -0.44994547 1.0000e+00 6.2392e-26 hypomethylated 1.0000e+00 3.6701e-24 hypomethylated 1.0000e+00 5.7029e-11 hypomethylated 1.0000000 3.5204e-09 hypomethylated -4.8137e-01 1.4909e-03 weaklyHypometh 3.1674e-02 weaklyHypometh chr19 2479050 2480050 52792 ENSG00000214571 0.779532 62 5 0.717135 126 5 0.775804 51 4 0.8235798 121 5 0.8973214 23 2 0.810949 133 5 0.8333333 33 2 0.8159239 114 5 0.8288515 61 5 0.854762 29 3 0.871763 120 5 0.8125000 11 0 0.83384615 98 5 0.862389 70 5 0.8653409 58 4 0.6562500 22 2 0.5000000 19 1 0.8250543 84 5 0.9124652 87 5 0.782711 74 5 0.723810 51 5 0.904762 45 2 0.827778 34 4 0.9333333 33 5 0.677778 19 2 0.8092262 101 5 0.786190 38 5 0.730769 29 2 0.753810 78 3 0.861975 168 5 0.7361142 137 5 0.7912314 111 5 0.7671935 114 5 0.7059039 86 4 0.7444444 101 3 1.0000000 32 2 0.7152399 92 5 0.6815458 151 5 0.688333 52 5 0.7502068 191 5 0.8702068 345 5 0.5000000 36 3 0.8977778 76 5 0.732387 0.7124821 0.729071 0.8065717 0.800454 0.781930 0.7989418 0.7916507 0.794384 0.822846 0.8510761 0.816443 0.8001628 0.8571171 0.8520743 0.6696173 0.6202067 0.8101018 0.9170819 0.737996 0.777778 0.9051052 0.817681 0.9206349 0.7777778 0.8049698 0.756274 0.853480 0.742366 0.8332892 0.7239387 0.7732778 0.7738172 0.6883614 0.7472826 8.8685e-01 0.77450865 0.6105149 0.654101 0.7173430 0.842238 0.5157932 0.8765432 0 0.8430108 0.8529063 -0.00372238 5 0.818628 0.632293 0.18633535 0.91380315 8.1966e-01 insignificant 1.00000 1.000000 insignificant 0.92627981 7.1901e-01 insignificant 1.00000 1.000000 insignificant 0.00824417 0.78780797 lowCoverage 1.00000 lowCoverage 0.8430108 0.7256944 0.11435056 5 0.818628 0.6351712 0.1834570 2.5723e-03 9.9821e-01 weaklyHypermeth 1.6077e-02 1.0000e+00 weaklyHypermeth 6.6067e-01 9.1123e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0339209 5.3545e-01 lowCoverage 1.0000e+00 lowCoverage 0.8437725 0.9100000 0.02362091 5 0.8098052 0.7748199 0.03498528 5.5883e-02 5.6905e-01 insignificant 5.3222e-01 1.0000e+00 insignificant 3.1159e-01 8.6023e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0616706 4.4734e-01 lowCoverage 1.0000e+00 lowCoverage 0.8539192 0.7252174 0.1297184 5 0.722620 0.5830528 0.13956760 7.5276e-03 9.9609e-01 weaklyHypermeth 4.7338e-02 1.0000e+00 weaklyHypermeth 4.8773e-01 8.3901e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.02567677 6.4045e-01 lowCoverage 1.0000e+00 lowCoverage 0.8547619 0.9100000 3.1468e-02 5 0.8116686 0.7748199 3.6849e-02 1.0199e-01 6.4723e-01 insignificant 9.3568e-01 1.0000e+00 insignificant 1.9843e-01 9.3936e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.05342642 5.0865e-01 lowCoverage 1.0000e+00 lowCoverage 0.7272727 0.9100000 -7.1037e-02 5 0.7162740 0.7748199 -0.05854593 9.5901e-01 6.2826e-02 insignificant 1.0000e+00 3.5697e-01 insignificant 7.0524e-01 5.5038e-01 insignificant 1.0000000 1.0000e+00 insignificant 2.7750e-02 7.5605e-01 lowCoverage 1.0000e+00 lowCoverage chr19 2494150 2495150 52794 ENSG00000105694 0.213233 581 12 0.181138 436 13 0.162242 539 16 0.1782354 492 12 0.2034000 505 12 0.248140 880 16 0.2323325 563 12 0.2498241 476 12 0.1478985 467 12 0.164250 426 12 0.264330 662 12 0.2292731 298 9 0.17137045 418 12 0.254638 368 12 0.1497784 683 12 0.1522911 203 9 0.1066667 19 3 0.1181381 834 12 0.2176249 730 11 0.164959 726 13 0.261408 263 12 0.194263 151 6 0.282415 517 15 0.4221599 228 10 0.304386 78 8 0.1094863 676 13 0.269608 501 12 0.194362 278 12 0.267970 605 12 0.142006 900 16 0.1812839 669 16 0.2877163 657 12 0.0290386 573 16 0.1273048 554 9 0.1605442 228 12 0.0740741 24 1 0.0318267 700 12 0.0449605 818 15 0.174432 766 12 0.1394781 621 10 0.1723214 331 11 0.1641156 1057 12 0.1537364 380 12 0.092764 0.0942748 0.120396 0.0935484 0.083887 0.174587 0.0863369 0.0933703 0.097451 0.084360 0.1540933 0.137515 0.0485898 0.0990429 0.0406543 0.1549704 0.0633777 0.0772783 0.0661310 0.085796 0.146077 0.0202822 0.157685 0.1276617 0.0896278 0.0709231 0.081651 0.076175 0.106708 0.0657133 0.1023931 0.2067037 0.0070293 0.0153890 0.1433742 1.2922e-02 0.00058066 0.0032315 0.043454 0.0325531 0.023214 0.0242921 0.0553766 9 0.1417201 0.1544450 -0.01516835 12 0.188608 0.274760 -0.08615199 0.99573857 9.6076e-02 insignificant 1.00000 1.000000 insignificant 0.91633462 4.4425e-01 insignificant 1.00000 1.000000 insignificant -0.05260049 0.06459654 insignificant 1.00000 insignificant 0.1416084 0.0227822 0.10835970 12 0.182030 0.0367954 0.1452345 6.2907e-24 1.0000e+00 weaklyHypermeth 1.2838e-22 1.0000e+00 weaklyHypermeth 7.2010e-16 1.0000e+00 weaklyHypermeth 2.3229e-14 1.0000e+00 weaklyHypermeth 0.1125300 2.2688e-03 weaklyHypermeth 2.8360e-02 weaklyHypermeth 0.1414544 0.0624406 0.04567017 12 0.1791926 0.1504798 0.02871277 3.3855e-08 9.9593e-01 weaklyHypermeth 1.8808e-06 1.0000e+00 weaklyHypermeth 1.5860e-10 9.9961e-01 weaklyHypermeth 2.7448e-08 1.00000000 weaklyHypermeth 0.0296715 2.4218e-02 weaklyHypermeth 3.5099e-01 insignificant 0.1544730 0.0227822 0.1280762 12 0.287249 0.0367954 0.25045405 9.1589e-22 1.0000e+00 weaklyHypermeth 2.0816e-20 1.0000e+00 weaklyHypermeth 6.9030e-11 1.0000e+00 weaklyHypermeth 1.9723e-09 1.0000000 weaklyHypermeth 0.16513049 1.6778e-04 weaklyHypermeth 3.3556e-03 weaklyHypermeth 0.1530779 0.0624406 6.2196e-02 12 0.2574167 0.1504798 1.0694e-01 2.3506e-08 1.0000e+00 weaklyHypermeth 1.2371e-06 1.0000e+00 weaklyHypermeth 3.5821e-06 1.0000e+00 weaklyHypermeth 3.2564e-04 1.0000e+00 weaklyHypermeth 0.08227203 6.3245e-03 weaklyHypermeth 2.8748e-01 insignificant 0.0228374 0.0624406 -5.2398e-02 12 0.0426052 0.1504798 -0.10787460 1.0000e+00 4.0711e-07 weaklyHypometh 1.0000e+00 6.4620e-06 weaklyHypometh 1.0000e+00 7.7281e-02 insignificant 1.0000000 5.0182e-01 insignificant -8.2858e-02 1.2343e-02 weaklyHypometh 1.5053e-01 insignificant chr19 2527450 2528450 52795 ENSG00000213611 0.961712 348 9 0.844615 253 10 0.961393 142 9 0.9432080 389 9 0.8996058 95 7 0.967402 371 9 0.8813711 157 7 0.8596844 132 7 0.9076334 129 4 0.983014 108 5 0.963635 345 10 0.7778859 104 5 0.96832789 144 5 0.790476 51 4 0.9498963 138 5 0.7142857 25 3 0.8750000 73 4 0.9429255 282 9 0.9836790 133 7 0.941416 225 9 0.922222 63 9 0.962500 81 4 0.961343 131 6 1.0000000 59 4 0.974118 134 10 0.9550054 193 7 0.962536 108 5 0.942662 81 4 0.973392 143 7 0.930559 233 10 0.9692602 169 9 0.9626821 339 9 0.6374849 152 6 0.6180556 70 4 0.8634101 131 5 0.7150783 134 10 0.5621114 115 7 0.8022279 160 9 0.929395 276 9 0.9619889 315 10 0.9150784 237 6 0.9335523 131 6 0.9414923 314 10 0.955664 0.8945538 0.957490 0.9314259 0.878026 0.950212 0.8999093 0.8464313 0.926183 0.949313 0.9373609 0.880702 0.9555318 0.8741844 0.9616389 0.6127660 0.8986460 0.9317480 0.9608458 0.927244 0.820426 0.9610638 0.933838 1.0000000 0.9648561 0.9932946 0.874074 0.864035 0.953397 0.9453277 0.9490877 0.9583382 0.8499662 0.8305851 0.8229787 9.1277e-01 0.87670075 0.9514780 0.977675 0.9710914 0.946786 0.9400831 0.9651387 4 0.9302964 0.9456961 -0.01550823 6 0.935600 0.956846 -0.02124537 0.98511381 1.4693e-02 weaklyHypometh 1.00000 0.612844 insignificant 0.99918848 9.0578e-04 weaklyHypometh 1.00000 0.271976 insignificant -0.05383165 0.00636598 weaklyHypometh 1.00000 insignificant 0.9302964 0.7897503 0.14036961 7 0.935600 0.7074919 0.2281085 9.0407e-18 8.1820e-01 weaklyHypermeth 1.5323e-16 1.0000e+00 weaklyHypermeth 5.4945e-08 3.7994e-01 weaklyHypermeth 1.0989e-06 1.0000e+00 weaklyHypermeth 0.2061303 5.6158e-03 weaklyHypermeth 6.3649e-02 weaklyHypermeth 0.9302964 0.9520817 -0.02179225 9 0.9356004 0.9401429 -0.00454244 5.5877e-01 5.6204e-02 insignificant 1.0000e+00 8.4388e-01 insignificant 4.2861e-01 5.5277e-02 insignificant 1.0000e+00 1.00000000 insignificant -0.0304430 1.1566e-01 insignificant 1.0000e+00 insignificant 0.9457275 0.7900262 0.1543226 6 0.960769 0.7340835 0.22668538 9.0679e-17 9.9892e-01 weaklyHypermeth 1.7109e-15 1.0000e+00 weaklyHypermeth 5.7124e-08 9.9340e-01 weaklyHypermeth 1.2694e-06 1.0000000 weaklyHypermeth 0.25996193 2.5481e-03 weaklyHypermeth 3.3528e-02 weaklyHypermeth 0.9456961 0.9520817 -6.4685e-03 6 0.9568458 0.9401429 1.6703e-02 1.2241e-01 8.2591e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.0044e-02 9.5793e-01 insignificant 7.0640e-01 1.0000e+00 insignificant 0.02338860 4.0034e-02 weaklyHypermeth 7.8497e-01 insignificant 0.7897503 0.9520817 -1.6025e-01 7 0.7074919 0.9401429 -0.23265099 9.4006e-01 1.1495e-07 weaklyHypometh 1.0000e+00 2.0865e-06 weaklyHypometh 8.4223e-01 6.3851e-05 weaklyHypometh 1.0000000 1.3302e-03 weaklyHypometh -2.3657e-01 3.7502e-03 weaklyHypometh 6.0486e-02 weaklyHypometh chr19 2529350 2530350 52796 ENSG00000213611 0.066491 681 19 0.037121 725 22 0.045492 779 22 0.0238150 757 15 0.0257751 655 21 0.119503 1258 20 0.0349149 840 22 0.0654866 844 22 0.0230502 1473 22 0.053645 1188 22 0.102174 741 22 0.0995417 831 22 0.00947022 1074 22 0.029529 547 12 0.0218566 1236 22 0.0374825 764 22 0.0202792 649 22 0.0674098 1026 18 0.0369224 543 22 0.056642 853 20 0.085387 271 19 0.017094 609 17 0.056217 497 20 0.0550562 384 22 0.006530 360 17 0.0586410 1126 22 0.029785 466 19 0.012168 497 19 0.033609 609 22 0.011785 1195 22 0.0199603 973 21 0.1029243 1004 21 0.0036024 683 22 0.0000000 457 22 0.0000000 655 13 0.0000000 144 15 0.0481502 370 18 0.0034965 1021 22 0.059482 788 20 0.0281655 780 22 0.0646098 652 18 0.0262695 716 19 0.0784722 640 18 0.031007 0.0199225 0.041801 0.0119999 0.012551 0.057801 0.0344149 0.0183151 0.012922 0.039131 0.0564408 0.050101 0.0097607 0.0284709 0.0234954 0.0218448 0.0103807 0.0141277 0.0349505 0.020319 0.033100 0.0047391 0.043896 0.0196925 0.0083198 0.0142015 0.015213 0.017703 0.024712 0.0068607 0.0159752 0.0778912 0.0054938 0.0000000 0.0000000 0.0000e+00 0.02283937 0.0010975 0.037990 0.0152934 0.015078 0.0105094 0.0328294 14 0.0305199 0.0277813 0.00358453 22 0.067997 0.055764 0.01223229 0.30454903 9.8100e-01 insignificant 1.00000 1.000000 insignificant 0.00591167 9.9963e-01 weaklyHypermeth 0.98528 1.000000 insignificant 0.00806705 0.47964868 insignificant 1.00000 insignificant 0.0305217 0.0048048 0.02400569 22 0.070612 0.0353360 0.0352759 8.7719e-11 1.0000e+00 weaklyHypermeth 1.0569e-09 1.0000e+00 weaklyHypermeth 4.4929e-13 1.0000e+00 weaklyHypermeth 1.3615e-11 1.0000e+00 weaklyHypermeth 0.0396219 1.9901e-03 weaklyHypermeth 2.5792e-02 weaklyHypermeth 0.0303777 0.0223714 0.00349507 19 0.0599618 0.0956187 -0.03565690 1.1225e-01 3.3690e-01 insignificant 9.2006e-01 1.0000e+00 insignificant 5.9345e-02 7.1270e-01 insignificant 6.3133e-01 1.00000000 insignificant -0.0025696 8.4064e-01 insignificant 1.0000e+00 insignificant 0.0277917 0.0048048 0.0207021 22 0.057909 0.0353360 0.02257311 1.6640e-04 1.0000e+00 weaklyHypermeth 1.4102e-03 1.0000e+00 weaklyHypermeth 7.8220e-06 1.0000e+00 weaklyHypermeth 1.1851e-04 1.0000000 weaklyHypermeth 0.03155487 1.8112e-02 weaklyHypermeth 1.7584e-01 insignificant 0.0277047 0.0223714 3.4082e-05 19 0.0523182 0.0956187 -4.3300e-02 8.0122e-01 4.0130e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.1113e-01 3.7810e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01063666 4.5509e-01 insignificant 1.0000e+00 insignificant 0.0045140 0.0223714 -1.8038e-02 19 0.0278640 0.0956187 -0.06775470 1.0000e+00 3.0968e-07 weaklyHypometh 1.0000e+00 4.9948e-06 weaklyHypometh 1.0000e+00 3.2499e-05 weaklyHypometh 1.0000000 7.5579e-04 weaklyHypometh -4.2192e-02 1.2024e-02 weaklyHypometh 1.4844e-01 insignificant chr19 2538550 2539550 52797 ENSG00000213611 0.714777 328 11 0.547561 304 11 0.584044 232 11 0.5778348 398 11 0.5812417 180 11 0.700669 385 11 0.6631818 196 11 0.6009011 321 11 0.5140260 233 11 0.631124 164 9 0.712583 382 11 0.4186223 107 9 0.53606936 243 11 0.638500 182 10 0.6900653 99 7 0.5127778 69 8 0.5762762 297 6 0.6184824 513 10 0.5256231 234 11 0.635479 325 11 0.569273 101 8 0.506299 147 8 0.712735 226 11 0.5912281 147 11 0.641300 219 11 0.6520845 364 11 0.508685 149 11 0.635581 58 5 0.596973 181 11 0.570304 472 11 0.5342945 404 11 0.7674020 413 11 0.4752945 335 11 0.6382221 207 11 0.4587341 413 8 0.3000000 44 5 0.4296866 280 11 0.4435918 429 11 0.406748 423 11 0.5243767 359 11 0.5186926 474 11 0.3478024 191 6 0.5261105 398 11 0.644168 0.4926953 0.548889 0.4978806 0.580405 0.655125 0.6460381 0.5500688 0.462396 0.618165 0.6994463 0.443381 0.4294511 0.5640284 0.6430226 0.4873490 0.5506198 0.5816726 0.5084974 0.588252 0.494871 0.4073176 0.661060 0.5852853 0.5943530 0.5865371 0.424764 0.636948 0.579776 0.5088035 0.5277976 0.7456118 0.4570737 0.6340690 0.5768445 2.9492e-01 0.51666978 0.4090507 0.403224 0.5050181 0.467095 0.3448781 0.4902300 8 0.5824345 0.6224383 -0.02179915 11 0.629121 0.586472 0.04264903 0.33582058 2.1581e-02 weaklyHypometh 1.00000 0.730535 insignificant 0.33373609 4.3993e-02 weaklyHypometh 1.00000 1.000000 insignificant -0.00818796 0.77802058 insignificant 1.00000 insignificant 0.5824981 0.4130053 0.17440749 11 0.639881 0.4971419 0.1427389 6.0096e-15 5.0714e-01 weaklyHypermeth 8.9696e-14 1.0000e+00 weaklyHypermeth 1.0125e-05 6.1757e-01 weaklyHypermeth 1.3499e-04 1.0000e+00 weaklyHypermeth 0.1414038 2.2086e-02 weaklyHypermeth 2.0079e-01 insignificant 0.5824981 0.4043360 0.15274008 11 0.6398808 0.5042303 0.13565043 5.2945e-09 9.9998e-01 weaklyHypermeth 3.5297e-07 1.0000e+00 weaklyHypermeth 9.0169e-06 9.9995e-01 weaklyHypermeth 4.9217e-04 1.00000000 weaklyHypermeth 0.1342458 1.7022e-02 weaklyHypermeth 2.9370e-01 insignificant 0.6233043 0.4130053 0.2146579 11 0.635344 0.4971419 0.13820244 3.5561e-18 3.1856e-01 hypermethylated 7.1122e-17 1.0000e+00 hypermethylated 7.0584e-05 3.8890e-01 hypermethylated 8.6078e-04 1.0000000 hypermethylated 0.14959173 1.7561e-02 weaklyHypermeth 1.7387e-01 insignificant 0.6233043 0.4043360 1.7005e-01 11 0.6353443 0.5042303 1.3111e-01 2.5797e-14 9.9984e-01 weaklyHypermeth 5.1594e-12 1.0000e+00 weaklyHypermeth 3.1444e-06 9.9879e-01 weaklyHypermeth 3.2564e-04 1.0000e+00 weaklyHypermeth 0.14243378 1.2803e-02 weaklyHypermeth 4.3285e-01 insignificant 0.4130053 0.4043360 -3.8559e-02 11 0.4971419 0.5042303 -0.00708846 2.0553e-01 2.1712e-02 weaklyHypometh 1.0000e+00 1.3918e-01 insignificant 3.6189e-01 1.4714e-01 insignificant 1.0000000 8.6048e-01 insignificant -7.1580e-03 9.0391e-01 insignificant 1.0000e+00 insignificant chr19 2553250 2554250 52798 ENSG00000213611 0.342126 269 11 0.235762 580 11 0.223597 282 11 0.2641677 314 11 0.3372114 214 11 0.308756 376 11 0.2518162 231 11 0.3222961 134 11 0.2628553 224 11 0.332810 200 8 0.353659 391 11 0.1770655 117 8 0.28686623 196 11 0.232185 174 7 0.2409131 309 8 0.2070175 167 8 0.1640212 38 1 0.3060436 393 12 0.3163840 338 11 0.254836 317 11 0.283808 106 8 0.120393 134 8 0.274621 195 11 0.2363618 206 11 0.292632 141 7 0.2725726 507 11 0.275387 305 10 0.228297 164 11 0.265393 346 11 0.319095 652 11 0.2650005 422 11 0.3021511 330 11 0.2562271 431 12 0.2546296 129 11 0.5598461 75 4 0.2500000 71 8 0.2499325 422 11 0.2545892 426 11 0.256943 298 11 0.2401495 219 11 0.2607721 287 11 0.2524298 250 11 0.3270424 253 11 0.180898 0.1578798 0.153298 0.1403386 0.218824 0.162750 0.1345604 0.2205707 0.168888 0.215215 0.2599049 0.215635 0.1665674 0.1888246 0.1337566 0.1322001 0.2288875 0.1781345 0.1599292 0.115607 0.217990 0.1327356 0.158676 0.1602728 0.1611967 0.1592950 0.157480 0.139965 0.150534 0.1411595 0.1443157 0.1716585 0.1004575 0.1143896 0.2445292 1.2071e-01 0.15500689 0.1231480 0.131131 0.1274317 0.132823 0.1377785 0.1326898 8 0.2097264 0.1647662 0.01863943 11 0.254070 0.270924 -0.01685388 0.11763909 7.8055e-01 insignificant 1.00000 1.000000 insignificant 0.27488575 8.7812e-01 insignificant 1.00000 1.000000 insignificant 0.00971005 0.61865175 insignificant 1.00000 insignificant 0.2098460 0.1589447 0.04487472 11 0.296415 0.2691133 0.0273017 1.4436e-05 9.9861e-01 weaklyHypermeth 1.1458e-04 1.0000e+00 weaklyHypermeth 1.4617e-04 9.9985e-01 weaklyHypermeth 1.6062e-03 1.0000e+00 weaklyHypermeth -0.0331846 5.5316e-01 insignificant 1.0000e+00 insignificant 0.2098460 0.2685539 0.03123748 11 0.2964150 0.2613295 0.03508553 1.6373e-03 9.8344e-01 weaklyHypermeth 2.5190e-02 1.0000e+00 weaklyHypermeth 2.4645e-03 9.7847e-01 weaklyHypermeth 6.1613e-02 1.00000000 weaklyHypermeth 0.0035522 8.6051e-01 insignificant 1.0000e+00 insignificant 0.1648101 0.1589447 0.0294221 11 0.288300 0.2691133 0.01918676 1.4364e-04 9.9591e-01 weaklyHypermeth 1.2383e-03 1.0000e+00 weaklyHypermeth 3.7886e-04 9.9820e-01 weaklyHypermeth 4.1181e-03 1.0000000 weaklyHypermeth -0.04289460 4.5175e-01 insignificant 1.0000e+00 insignificant 0.1648101 0.2685539 1.7695e-02 11 0.2883001 0.2613295 2.6971e-02 4.3741e-03 9.5387e-01 weaklyHypermeth 6.8345e-02 1.0000e+00 weaklyHypermeth 1.1306e-02 9.5085e-01 weaklyHypermeth 2.0937e-01 1.0000e+00 insignificant -0.00615782 7.7697e-01 insignificant 1.0000e+00 insignificant 0.1589447 0.2685539 -1.1047e-02 11 0.2691133 0.2613295 0.00778385 8.6456e-01 1.1839e-01 insignificant 1.0000e+00 6.0286e-01 insignificant 9.7236e-01 2.3680e-01 insignificant 1.0000000 1.0000e+00 insignificant 3.6737e-02 5.1753e-01 insignificant 1.0000e+00 insignificant chr19 2604450 2605450 52799 ENSG00000213611 0.117653 187 11 0.135489 313 9 0.206858 468 11 0.0767753 137 6 0.0941386 225 12 0.237719 295 8 0.0953461 298 9 0.1357425 332 8 0.1445324 399 8 0.115033 314 8 0.137809 289 9 0.2522145 254 8 0.09791850 331 8 0.077222 191 9 0.0800507 428 8 0.2227880 215 8 0.1745743 120 5 0.0968615 180 8 0.2364189 157 5 0.135079 250 8 0.183279 90 8 0.176568 160 5 0.089295 268 11 0.1083639 120 7 0.049444 80 5 0.1533537 365 9 0.058873 202 8 0.064567 128 7 0.120984 135 6 0.154685 405 9 0.0627626 347 9 0.1408832 234 8 0.0521886 290 9 0.0460417 114 7 0.0500000 95 6 0.0000000 25 2 0.1360823 156 8 0.1238676 238 8 0.094987 154 9 0.1704386 160 11 0.0233660 98 6 0.0576066 165 6 0.1650311 153 7 0.111961 0.0811587 0.200219 0.1363283 0.118294 0.245897 0.0965151 0.0948916 0.113970 0.139571 0.1229980 0.233118 0.0228476 0.1192573 0.0988185 0.1956251 0.0738184 0.1231357 0.0075891 0.077803 0.289991 0.0753352 0.164826 0.1554548 0.0778142 0.1050692 0.081549 0.107287 0.149730 0.0505689 0.0430603 0.1750531 0.0327726 0.0568156 0.1244387 1.2448e-03 0.06838615 0.0140300 0.177020 0.1328437 0.081221 0.1041606 0.2085265 3 0.1404682 0.1047017 0.02350440 8 0.123745 0.088959 0.03478588 0.00667344 9.9007e-01 weaklyHypermeth 0.71214 1.000000 insignificant 0.02455987 9.8483e-01 weaklyHypermeth 1.00000 1.000000 insignificant 0.02992288 0.12798243 insignificant 1.00000 insignificant 0.1404943 0.0348584 0.11397261 8 0.134057 0.0539098 0.0801472 1.7199e-08 9.9997e-01 weaklyHypermeth 1.6861e-07 1.0000e+00 weaklyHypermeth 1.6867e-06 9.9999e-01 weaklyHypermeth 2.5556e-05 1.0000e+00 weaklyHypermeth 0.0754811 1.3791e-02 weaklyHypermeth 1.2889e-01 insignificant 0.1404943 0.1383562 -0.01983238 8 0.1340569 0.1533196 -0.01926267 1.0296e-01 6.6053e-02 insignificant 8.5799e-01 9.4361e-01 insignificant 9.1169e-03 8.3516e-01 inconclusive 1.5995e-01 1.00000000 insignificant 0.0412252 2.4485e-01 insignificant 1.0000e+00 insignificant 0.1047431 0.0348584 0.0784148 9 0.096372 0.0539098 0.04246246 9.4212e-04 9.9905e-01 weaklyHypermeth 6.9786e-03 1.0000e+00 weaklyHypermeth 9.2355e-04 9.9522e-01 weaklyHypermeth 8.8803e-03 1.0000000 weaklyHypermeth 0.04555825 1.0406e-01 insignificant 6.9131e-01 insignificant 0.1047431 0.1383562 -4.2326e-02 7 0.0963722 0.1533196 -5.6947e-02 8.4850e-01 2.1780e-03 weaklyHypometh 1.0000e+00 1.9800e-01 insignificant 4.9697e-01 7.7050e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01130231 7.3772e-01 insignificant 1.0000e+00 insignificant 0.0348584 0.1383562 -1.0504e-01 7 0.0539098 0.1533196 -0.09940983 9.9910e-01 1.7184e-04 weaklyHypometh 1.0000e+00 1.8883e-03 weaklyHypometh 9.9048e-01 1.5756e-01 insignificant 1.0000000 9.0037e-01 insignificant -3.4256e-02 3.6951e-01 insignificant 1.0000e+00 insignificant chr19 2673450 2674450 52800 DIRAS1 ENSG00000176490 0.869922 289 11 0.632686 271 11 0.626903 193 11 0.8245133 340 11 0.8452585 111 9 0.850365 299 11 0.7274802 88 10 0.6947439 259 11 0.7490750 246 11 0.834503 220 11 0.786899 327 11 0.4816919 88 10 0.49599738 332 11 0.683662 178 7 0.6260754 256 9 0.7272727 17 0 0.4633333 46 6 0.6047825 409 9 0.6820315 317 11 0.719766 395 11 0.723052 153 12 0.450274 246 11 0.705658 187 11 0.7420657 214 10 0.805540 154 11 0.6870805 322 11 0.730266 213 11 0.613760 69 7 0.692711 232 11 0.756313 430 11 0.7595270 326 11 0.8379311 418 11 0.3492340 290 11 0.3059147 202 11 0.1767207 602 9 0.3404762 106 9 0.3418378 259 12 0.4225750 307 11 0.535807 295 10 0.6170465 330 11 0.7055363 248 9 0.6416424 321 11 0.7161616 379 11 0.840377 0.6673581 0.561192 0.7864534 0.838819 0.848095 0.7345302 0.6980549 0.694622 0.811523 0.7805791 0.460312 0.5409501 0.6944014 0.5717767 0.7561146 0.4621963 0.5022177 0.6595345 0.767714 0.826243 0.4537833 0.851688 0.7568598 0.7187376 0.7598092 0.706525 0.699927 0.735220 0.7106830 0.6622739 0.7951912 0.2514883 0.2105704 0.2479762 2.4477e-01 0.24819749 0.3240469 0.544156 0.5896564 0.605377 0.5277366 0.6247023 5 0.7000641 0.7213225 -0.01858454 11 0.546249 0.625844 -0.07959534 0.99446934 2.0092e-01 insignificant 1.00000 1.000000 insignificant 0.99980570 2.4310e-01 insignificant 1.00000 1.000000 insignificant -0.01233360 0.75912932 insignificant 1.00000 insignificant 0.6998717 0.2197055 0.46253721 11 0.519558 0.2668129 0.2527449 1.4710e-38 9.9999e-01 hypermethylated 4.2028e-37 1.0000e+00 hypermethylated 4.6920e-12 9.9972e-01 hypermethylated 1.2681e-10 1.0000e+00 hypermethylated 0.3735550 1.0925e-06 hypermethylated 3.4141e-05 hypermethylated 0.7007925 0.5657978 0.11771741 11 0.6486525 0.6123798 0.03627272 1.2321e-03 7.9330e-01 weaklyHypermeth 1.9872e-02 1.0000e+00 weaklyHypermeth 5.9526e-03 5.1876e-01 weaklyHypermeth 1.1672e-01 1.00000000 insignificant 0.0531093 2.4126e-01 insignificant 1.0000e+00 insignificant 0.7210010 0.2197055 0.4800242 11 0.612239 0.2668129 0.34542569 1.4232e-32 1.0000e+00 hypermethylated 5.0828e-31 1.0000e+00 hypermethylated 3.2109e-12 1.0000e+00 hypermethylated 9.7301e-11 1.0000000 hypermethylated 0.38588860 1.2363e-06 hypermethylated 4.6503e-05 hypermethylated 0.7222978 0.5657978 1.3320e-01 11 0.6826710 0.6123798 7.0291e-02 3.1994e-04 9.6180e-01 weaklyHypermeth 7.4404e-03 1.0000e+00 weaklyHypermeth 1.2334e-04 8.2912e-01 weaklyHypermeth 5.1392e-03 1.0000e+00 weaklyHypermeth 0.06544289 1.6311e-01 insignificant 1.0000e+00 insignificant 0.2203872 0.5657978 -3.2892e-01 11 0.3104477 0.6123798 -0.30193216 1.0000e+00 8.1903e-19 hypomethylated 1.0000e+00 3.1501e-17 hypomethylated 1.0000e+00 1.7458e-08 hypomethylated 1.0000000 5.8194e-07 hypomethylated -3.2045e-01 7.5864e-05 hypomethylated 3.8984e-03 hypomethylated chr19 2673550 2674550 52801 DIRAS1 ENSG00000176490 0.872583 357 13 0.647626 357 13 0.674262 318 13 0.7736845 422 13 0.7827723 152 11 0.791790 423 13 0.7494048 125 12 0.6743465 390 13 0.7579791 341 13 0.847198 310 13 0.799684 477 13 0.5252580 135 12 0.57455965 442 13 0.713836 274 9 0.6506352 348 11 0.6684492 45 2 0.5319444 53 6 0.5955159 496 11 0.7077110 480 13 0.738605 492 13 0.688953 214 14 0.498059 322 13 0.683899 283 13 0.7239581 290 12 0.815212 197 13 0.6242281 427 13 0.696106 342 13 0.637143 130 9 0.733915 353 13 0.771928 561 13 0.7264979 424 13 0.8214853 506 13 0.4084087 394 13 0.3457124 274 13 0.2642806 854 11 0.3880952 117 11 0.3844972 342 15 0.4559168 432 13 0.547232 354 12 0.6132653 416 13 0.7381658 313 11 0.7155762 392 13 0.7405809 436 13 0.857685 0.6706848 0.639417 0.8224105 0.833547 0.847304 0.7785317 0.7656847 0.734394 0.850823 0.8127169 0.577772 0.6879352 0.7462277 0.6531125 0.5778014 0.6122217 0.6332987 0.7367675 0.795697 0.814266 0.5947976 0.853977 0.8329121 0.7763704 0.7862661 0.756862 0.722292 0.778389 0.7693222 0.7482727 0.8345133 0.3135842 0.4581682 0.4655000 3.8868e-01 0.35201895 0.5359494 0.677745 0.7162578 0.739187 0.7114568 0.7159397 7 0.7337269 0.7535194 -0.02038660 13 0.555164 0.603748 -0.04858451 0.99632769 1.9272e-01 insignificant 1.00000 1.000000 insignificant 0.99987450 2.8656e-01 insignificant 1.00000 1.000000 insignificant 0.00211013 0.95054482 insignificant 1.00000 insignificant 0.7336027 0.3485288 0.36433107 13 0.533981 0.3180675 0.2159134 1.5830e-40 1.0000e+00 hypermethylated 4.9468e-39 1.0000e+00 hypermethylated 4.6588e-12 9.9970e-01 hypermethylated 1.2681e-10 1.0000e+00 hypermethylated 0.3294070 3.7393e-07 hypermethylated 1.4382e-05 hypermethylated 0.7343920 0.6274202 0.06841182 13 0.6446000 0.6337372 0.01086280 7.7971e-03 3.4247e-01 weaklyHypermeth 9.7464e-02 1.0000e+00 weaklyHypermeth 3.1188e-02 1.5674e-01 weaklyHypermeth 4.2723e-01 1.00000000 insignificant 0.0329282 4.8390e-01 insignificant 1.0000e+00 insignificant 0.7533399 0.3485288 0.3851440 13 0.591682 0.3180675 0.27361418 1.2798e-34 1.0000e+00 hypermethylated 4.7401e-33 1.0000e+00 hypermethylated 1.5855e-12 9.9999e-01 hypermethylated 4.9548e-11 1.0000000 hypermethylated 0.32729691 5.5471e-07 hypermethylated 2.5214e-05 hypermethylated 0.7547826 0.6274202 8.5499e-02 13 0.6807489 0.6337372 4.7012e-02 2.1343e-03 6.3648e-01 weaklyHypermeth 3.6798e-02 1.0000e+00 weaklyHypermeth 9.7567e-04 5.8072e-01 weaklyHypermeth 2.7876e-02 1.0000e+00 weaklyHypermeth 0.03081804 5.2606e-01 insignificant 1.0000e+00 insignificant 0.3494377 0.6274202 -3.0454e-01 13 0.3549636 0.6337372 -0.27877354 1.0000e+00 2.9461e-20 hypomethylated 1.0000e+00 1.1784e-18 hypomethylated 1.0000e+00 1.6032e-09 hypomethylated 1.0000000 6.6799e-08 hypomethylated -2.9648e-01 3.2773e-04 hypomethylated 1.0924e-02 hypomethylated chr19 2933750 2934750 52804 TLE6 ENSG00000104953 0.460476 91 2 0.385490 65 5 0.429364 88 5 0.4943735 117 4 0.5787098 68 5 0.560000 130 5 0.5292897 61 5 0.4415114 60 4 0.3561538 71 5 0.565747 74 5 0.561429 117 5 0.5191591 66 4 0.24820947 111 5 NA 0 0 0.2733333 72 5 0.7288889 41 3 0.3538240 50 4 0.2663690 119 2 0.5272439 72 5 0.394275 127 5 0.500000 23 3 0.214910 64 4 0.586607 81 4 0.4928571 36 3 0.466667 53 4 0.3902778 89 5 0.509264 62 5 0.480556 45 4 0.589394 45 5 0.297216 131 5 0.2495726 104 5 0.5283362 170 5 0.0729167 64 4 0.0562907 76 3 0.3333333 60 2 0.1000000 21 2 0.1538102 59 5 0.1160913 106 5 0.163758 112 5 0.3330604 129 5 0.4057773 74 2 0.3379433 108 2 0.1883333 106 2 0.494336 0.3005513 0.505059 0.5553211 0.576583 0.624194 0.5500683 0.4784904 0.473584 0.566630 0.5638825 0.553880 0.2709031 NA 0.2755376 0.6376344 0.5112880 0.3491505 0.4192134 0.471146 0.619624 0.2839368 0.638012 0.5096966 0.5635753 0.4049139 0.540457 0.584565 0.658443 0.3186276 0.1851392 0.5396400 0.0531874 0.0475301 0.3143341 1.6030e-01 0.09241580 0.0846214 0.190894 0.3172930 0.334432 0.3317748 0.2099933 2 0.4681250 0.4507198 0.01886015 5 0.443536 0.427341 0.01619438 0.33196352 8.3820e-01 insignificant 1.00000 1.000000 insignificant 0.23749189 4.5660e-01 insignificant 1.00000 1.000000 insignificant 0.01438015 0.75918642 lowCoverage 1.00000 lowCoverage 0.4681250 0.1632124 0.29603965 5 0.443536 0.1696648 0.2738710 2.3804e-11 9.8293e-01 hypermethylated 2.9388e-10 1.0000e+00 hypermethylated 6.6719e-09 1.0000e+00 hypermethylated 1.4504e-07 1.0000e+00 hypermethylated 0.3177779 7.5869e-05 lowCoverage 1.6493e-03 lowCoverage 0.4681250 0.2155009 0.23472950 2 0.4435359 0.2679010 0.17563485 1.1760e-06 9.9450e-01 lowCoverage 4.3462e-05 1.0000e+00 lowCoverage 1.3871e-05 9.8437e-01 lowCoverage 6.9353e-04 1.00000000 lowCoverage 0.1707438 1.6020e-02 lowCoverage 2.9370e-01 lowCoverage 0.4507198 0.1632124 0.2774018 5 0.427341 0.1696648 0.25767665 1.8495e-09 9.5426e-01 hypermethylated 2.2283e-08 1.0000e+00 hypermethylated 7.4873e-07 1.0000e+00 hypermethylated 1.3613e-05 1.0000000 hypermethylated 0.30339772 1.1998e-04 lowCoverage 2.4996e-03 lowCoverage 0.4507198 0.2155009 2.0702e-01 2 0.4273415 0.2679010 1.5944e-01 4.2392e-04 9.9711e-01 lowCoverage 9.5951e-03 1.0000e+00 lowCoverage 2.3940e-03 9.9700e-01 lowCoverage 5.8390e-02 1.0000e+00 lowCoverage 0.15636370 2.6737e-02 lowCoverage 6.6742e-01 lowCoverage 0.1632124 0.2155009 -7.1518e-02 2 0.1696648 0.2679010 -0.09823618 8.3367e-01 9.2707e-05 lowCoverage 1.0000e+00 1.0535e-03 lowCoverage 9.9248e-01 4.1871e-03 lowCoverage 1.0000000 4.9846e-02 lowCoverage -1.4703e-01 4.4373e-02 lowCoverage 3.9619e-01 lowCoverage chr19 2992850 2993850 52806 TLE2 ENSG00000065717 0.119568 315 8 0.084541 262 8 0.108289 403 8 0.0419611 335 8 0.0565461 199 6 0.090359 454 8 0.1581561 322 8 0.0890586 247 8 0.0550432 340 8 0.032837 528 8 0.067335 323 8 0.0643202 482 8 0.05224913 363 8 0.123016 172 2 0.1067718 543 8 0.0637634 613 8 0.0620780 3388 8 0.0784134 385 8 0.1192631 321 6 0.202375 417 8 0.072972 160 10 0.140948 260 8 0.119624 225 8 0.1210837 232 8 0.118093 228 8 0.0402101 335 8 0.055669 399 8 0.107909 278 9 0.130334 280 8 0.048541 322 8 0.1060583 255 8 0.0741251 481 8 0.1083876 203 8 0.1421306 135 8 0.1841725 189 6 0.0222039 144 8 0.1594424 162 6 0.1368534 192 8 0.041543 384 8 0.0965278 290 8 0.0879167 307 8 0.0761667 330 6 0.0707254 459 8 0.117117 0.0645912 0.120001 0.0332023 0.061551 0.097541 0.1253474 0.0940332 0.052103 0.044154 0.0608126 0.058083 0.0504862 0.0642813 0.0674961 0.0569243 0.0423213 0.0798120 0.0809031 0.085849 0.100845 0.0354372 0.077032 0.0542675 0.0456965 0.0301585 0.058917 0.069129 0.073152 0.0514929 0.0943847 0.0825820 0.0877724 0.0350637 0.0447892 1.7058e-02 0.19921507 0.1069502 0.036314 0.0616644 0.067676 0.0697357 0.0538381 7 0.0581060 0.0903039 0.00716894 8 0.087467 0.090282 -0.00281475 0.00426919 8.5173e-01 weaklyHypermeth 0.53365 1.000000 insignificant 0.00756033 9.0398e-01 weaklyHypermeth 1.00000 1.000000 insignificant -0.00583349 0.67193638 insignificant 1.00000 insignificant 0.0580825 0.1063415 -0.00662544 8 0.088638 0.1517408 -0.0631025 1.0530e-01 4.7495e-02 weaklyHypometh 4.6387e-01 1.0000e+00 insignificant 6.2007e-02 3.9234e-01 insignificant 3.6050e-01 1.0000e+00 insignificant -0.0367345 1.8499e-01 insignificant 1.0000e+00 insignificant 0.0580825 0.0384181 0.01640911 8 0.0886383 0.0647236 0.02391469 2.1821e-03 9.8645e-01 weaklyHypermeth 3.3063e-02 1.0000e+00 weaklyHypermeth 7.4258e-03 9.7650e-01 weaklyHypermeth 1.4001e-01 1.00000000 insignificant 0.0142213 3.0163e-01 insignificant 1.0000e+00 insignificant 0.0905374 0.1063415 -0.0100872 8 0.093144 0.1517408 -0.05859642 8.1941e-01 8.4530e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 4.7567e-01 5.3834e-02 insignificant 1.0000e+00 1.0000000 insignificant -0.03090104 2.5887e-01 insignificant 1.0000e+00 insignificant 0.0905374 0.0384181 6.5243e-03 8 0.0931444 0.0647236 2.8421e-02 2.4719e-01 8.8255e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.7486e-01 8.3235e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02005482 1.6814e-01 insignificant 1.0000e+00 insignificant 0.1063415 0.0384181 2.0525e-02 8 0.1517408 0.0647236 0.08701716 1.5430e-01 9.4999e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.3282e-01 8.3304e-01 insignificant 1.0000000 1.0000e+00 insignificant 5.0956e-02 8.2669e-02 insignificant 5.9905e-01 insignificant chr19 3005950 3006950 52807 TLE2 ENSG00000065717 0.669521 163 8 0.363380 156 8 0.487470 267 10 0.5069872 141 8 0.3310882 140 7 0.445912 325 9 0.3904067 193 9 0.3868356 218 9 0.5065942 186 7 0.469313 259 6 0.488352 261 10 0.4675246 160 8 0.28880943 290 8 0.252353 142 4 0.3373376 212 8 0.3434609 67 5 0.1531385 73 7 0.3619595 188 8 0.1376478 328 9 0.414428 286 9 0.453674 113 7 0.601667 93 6 0.547735 170 9 0.5424267 220 9 0.398291 113 6 0.4124328 288 9 0.461593 238 8 0.391115 105 4 0.471059 171 8 0.580427 266 9 0.1961368 378 10 0.6308928 292 8 0.7389203 183 9 0.8458428 213 8 0.5394832 298 9 0.5434885 76 7 0.5982581 161 7 0.8195353 213 9 0.502586 192 8 0.5927468 221 9 0.6720728 90 5 0.5172083 208 8 0.5444615 128 8 0.619182 0.2994059 0.437201 0.4810871 0.289097 0.531670 0.4255212 0.4389983 0.344228 0.521570 0.5542498 0.348395 0.2190589 0.3433073 0.3723840 0.3337329 0.1931916 0.4208281 0.1063672 0.372199 0.778242 0.6022815 0.530529 0.4750832 0.4682761 0.4353821 0.512892 0.501131 0.431028 0.3844141 0.2080772 0.5659507 0.8190191 0.8203710 0.9151994 5.9896e-01 0.78031197 0.9008962 0.451915 0.5161955 0.545039 0.5186703 0.5065667 5 0.3906289 0.4634246 -0.07335781 8 0.329522 0.422524 -0.09300145 0.99912495 9.1202e-03 weaklyHypometh 1.00000 0.480013 insignificant 0.99998606 1.0022e-02 weaklyHypometh 1.00000 0.626368 insignificant -0.08382809 0.07121226 insignificant 1.00000 insignificant 0.3907252 0.7998252 -0.43191918 8 0.351490 0.6089448 -0.2574545 1.0000e+00 3.0416e-27 hypomethylated 1.0000e+00 3.0416e-24 hypomethylated 1.0000e+00 5.1440e-12 hypomethylated 1.0000e+00 5.1440e-09 hypomethylated -0.2907954 1.9314e-03 weaklyHypometh 2.5792e-02 weaklyHypometh 0.3911750 0.5339690 -0.14584805 8 0.4105687 0.5873023 -0.17673361 9.9999e-01 3.5076e-08 weaklyHypometh 1.0000e+00 1.1692e-05 weaklyHypometh 9.9990e-01 7.6254e-06 weaklyHypometh 1.0000e+00 0.00254180 weaklyHypometh -0.1756890 1.2320e-03 weaklyHypometh 6.4842e-02 weaklyHypometh 0.4636141 0.7998252 -0.3430616 9 0.450692 0.6089448 -0.15825297 1.0000e+00 7.3002e-15 hypomethylated 1.0000e+00 7.3002e-12 hypomethylated 9.9999e-01 2.6778e-06 hypomethylated 1.0000e+00 0.0013389 hypomethylated -0.20696728 1.2333e-02 weaklyHypometh 1.2714e-01 insignificant 0.4666942 0.5339690 -6.8540e-02 9 0.4913155 0.5873023 -9.5987e-02 8.6822e-01 3.8461e-04 weaklyHypometh 1.0000e+00 4.8076e-02 weaklyHypometh 5.3272e-01 3.1192e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.09186094 6.7940e-02 insignificant 9.1811e-01 insignificant 0.8096085 0.5339690 2.9337e-01 9 0.7634172 0.5873023 0.17611484 2.5813e-10 9.9547e-01 hypermethylated 2.5813e-07 1.0000e+00 hypermethylated 5.0657e-06 9.9738e-01 hypermethylated 0.0050657 1.0000e+00 hypermethylated 1.1511e-01 1.1300e-01 insignificant 7.4345e-01 insignificant chr19 3031550 3032550 52809 AES ENSG00000104964 0.778075 206 5 0.803081 177 7 0.825036 46 5 0.8908551 220 6 0.6760417 87 5 0.886347 175 4 0.6223459 85 6 0.9135190 78 6 0.6916667 62 6 0.904762 34 3 0.853537 229 6 0.5846154 24 2 0.70720997 76 4 0.604911 51 3 0.6095467 54 4 0.9333333 27 1 0.8630952 45 2 0.8298858 161 5 0.7595083 75 4 0.758718 125 4 0.875000 36 3 1.000000 4 0 0.687777 119 5 0.8472222 54 5 0.889286 55 6 0.8014224 184 5 0.822222 37 4 0.611111 38 4 0.754734 78 5 0.912550 151 6 0.6762315 144 6 0.7972333 201 5 0.5898827 139 6 0.6757326 53 5 0.6961153 153 5 0.5444444 38 4 0.6404047 146 6 0.6855242 130 6 0.825131 167 6 0.7921730 230 5 0.8864974 217 5 0.8781126 59 4 0.8780531 222 6 0.899485 0.8484283 0.807286 0.9169593 0.858025 0.884603 0.7093822 0.9385568 0.890123 0.916667 0.8643161 0.722442 0.8324256 0.7377646 0.7749796 0.8888889 0.8403923 0.8216032 0.7821068 0.864230 0.886574 0.8728408 0.855939 0.8045267 0.8237654 0.8970980 0.933333 0.769467 0.792165 0.9130356 0.8136317 0.8926188 0.7587567 0.8244472 0.7090360 4.8508e-01 0.72012833 0.6902755 0.819800 0.9219526 0.928526 0.8609061 0.8495260 0 0.8321060 0.8392371 0.00140199 6 0.773759 0.744836 0.02892291 0.41568055 4.2125e-01 insignificant 1.00000 1.000000 insignificant 0.83054285 7.5515e-02 insignificant 1.00000 1.000000 insignificant -0.03142794 0.44818045 lowCoverage 1.00000 lowCoverage 0.8321060 0.7253414 0.14294147 6 0.773759 0.6036987 0.1700606 2.4404e-09 9.9292e-01 weaklyHypermeth 2.6241e-08 1.0000e+00 weaklyHypermeth 1.0857e-04 9.9495e-01 weaklyHypermeth 1.2337e-03 1.0000e+00 weaklyHypermeth 0.1361205 1.3497e-03 lowCoverage 1.9988e-02 lowCoverage 0.8330040 0.8703911 -0.02916825 6 0.7839407 0.8567345 -0.07279378 9.7178e-01 1.8686e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7132e-01 1.6511e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0771888 2.3781e-02 lowCoverage 3.5099e-01 lowCoverage 0.8392371 0.7253414 0.1507849 6 0.744836 0.6036987 0.14113773 4.5885e-06 9.9944e-01 weaklyHypermeth 4.4549e-05 1.0000e+00 weaklyHypermeth 3.6805e-05 9.9999e-01 weaklyHypermeth 5.0418e-04 1.0000000 weaklyHypermeth 0.16754844 7.5974e-04 lowCoverage 1.1173e-02 lowCoverage 0.8427788 0.8703911 -2.5802e-02 6 0.8022266 0.8567345 -5.4508e-02 8.6888e-01 3.0805e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.3297e-01 5.9706e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04576089 2.3358e-01 lowCoverage 1.0000e+00 lowCoverage 0.7275495 0.8703911 -1.7680e-01 6 0.6791610 0.8567345 -0.17757354 9.9870e-01 7.3994e-05 weaklyHypometh 1.0000e+00 8.7052e-04 weaklyHypometh 1.0000e+00 4.1144e-04 weaklyHypometh 1.0000000 6.5307e-03 weaklyHypometh -2.1331e-01 7.7968e-05 hypomethylated 3.8984e-03 hypomethylated chr19 3143950 3144950 52816 NCLN ENSG00000125912 0.916581 285 10 0.929056 317 10 0.831850 222 10 0.9619567 337 10 0.7545455 111 6 0.826171 371 10 0.9398937 208 9 0.8403719 273 10 0.8293259 248 7 0.807581 237 10 0.882545 275 10 0.9423819 120 4 0.92815889 281 10 0.866213 103 8 0.9706689 251 10 0.3948233 90 4 0.8438462 74 4 0.9192824 390 10 0.8760926 339 10 0.952232 302 10 0.856277 118 10 0.921860 195 9 0.796627 216 8 0.9384127 70 6 0.792391 300 8 0.9644714 407 10 0.799964 124 4 0.609740 62 4 0.772726 311 10 0.886703 408 10 0.8590174 343 10 0.9064933 345 10 0.9322069 250 10 0.7916143 322 10 1.0000000 85 5 0.8910078 229 9 0.6485055 145 10 0.9263132 418 10 0.940253 277 10 0.8697279 332 10 0.9083076 201 10 0.9719426 372 10 0.8734811 186 10 0.888446 0.8983848 0.785726 0.9670614 0.939024 0.909594 0.9316435 0.9175630 0.867449 0.935568 0.9533154 0.900996 0.9333305 0.9439841 0.9472091 0.6930742 0.8164732 0.9155203 0.9681258 0.940655 0.864808 0.9016544 0.938093 0.8895579 0.9536682 0.9460316 0.838464 0.858011 0.928126 0.9673656 0.9337043 0.9086517 0.8970085 0.6764866 0.9558116 9.1480e-01 0.85739535 0.9132300 0.951870 0.9383363 0.938645 0.9595212 0.9560211 3 0.9089215 0.9261814 -0.01766586 10 0.759632 0.677033 0.08259877 0.73993239 5.9593e-01 insignificant 1.00000 1.000000 insignificant 0.66200899 9.0888e-01 insignificant 1.00000 1.000000 insignificant 0.01862195 0.64009019 insignificant 1.00000 insignificant 0.9092980 0.8750863 0.04469137 10 0.801298 0.6989163 0.1023820 1.8405e-01 8.9682e-01 insignificant 7.8654e-01 1.0000e+00 insignificant 3.4138e-01 5.2102e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0042624 9.4368e-01 insignificant 1.0000e+00 insignificant 0.9096948 0.9517544 -0.03350889 10 0.8700703 0.8661352 0.00393510 9.6165e-01 4.2818e-02 weaklyHypometh 1.0000e+00 7.5119e-01 insignificant 5.3441e-01 2.8288e-02 weaklyHypometh 1.0000e+00 0.65785933 insignificant -0.0520636 1.4231e-01 insignificant 1.0000e+00 insignificant 0.9267956 0.8756906 0.0573159 10 0.699946 0.7455107 -0.04556456 4.7427e-02 7.5212e-01 weaklyHypermeth 2.4197e-01 1.0000e+00 insignificant 7.6604e-01 5.8018e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.02288437 7.0586e-01 insignificant 1.0000e+00 insignificant 0.9286457 0.9517544 -1.7685e-02 10 0.8726539 0.8661352 6.5187e-03 9.2026e-01 2.6696e-02 weaklyHypometh 1.0000e+00 8.0896e-01 insignificant 5.8532e-01 1.6072e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.07068558 5.5858e-02 insignificant 8.7854e-01 insignificant 0.8763889 0.9517544 -6.0790e-02 10 0.8347874 0.8661352 -0.03134781 5.1718e-01 1.0295e-01 insignificant 1.0000e+00 5.3898e-01 insignificant 4.1740e-01 4.7055e-01 insignificant 1.0000000 1.0000e+00 insignificant -4.7801e-02 4.1672e-01 insignificant 1.0000e+00 insignificant chr19 3235550 3236550 52819 BRUNOL5 ENSG00000161082 0.165557 455 16 0.195991 367 16 0.224883 479 16 0.1799463 596 17 0.2404170 388 16 0.190283 743 19 0.1424878 595 16 0.1884942 444 16 0.1630819 788 16 0.171050 555 16 0.163578 357 16 0.1794207 544 16 0.22220925 444 16 0.000000 198 11 0.1720946 569 16 0.2054721 528 16 0.0044894 326 11 0.2174517 540 15 0.0760186 291 16 0.210661 557 16 0.255673 169 8 0.120246 335 14 0.201658 356 18 0.1517532 227 17 0.222442 294 16 0.1871668 605 18 0.105689 254 13 0.114216 176 11 0.092687 265 11 0.165116 590 18 0.1887602 567 18 0.2051503 839 18 0.1745932 364 16 0.0255672 200 14 0.1570117 379 7 0.0191639 186 14 0.1420986 294 18 0.0614637 575 18 0.247172 570 18 0.1730102 529 15 0.1339595 406 15 0.1398865 555 16 0.1875207 482 18 0.018119 0.0303782 0.017253 0.0170034 0.022133 0.043807 0.0117197 0.0216846 0.014190 0.016556 0.0183146 0.017920 0.0150640 0.0030833 0.0174397 0.0194049 0.0064498 0.0245772 0.0060039 0.072158 0.059055 0.0178938 0.042352 0.0020206 0.0160916 0.0043780 0.015660 0.052758 0.024058 0.0042040 0.0141924 0.0200169 0.0190575 0.0456375 0.0291456 1.7342e-02 0.08651817 0.0192869 0.028839 0.0250980 0.018844 0.0147253 0.0502019 11 0.1409836 0.1342741 0.01148063 16 0.168385 0.197501 -0.02911595 0.14644521 9.0064e-01 insignificant 1.00000 1.000000 insignificant 0.31757626 7.6401e-01 insignificant 1.00000 1.000000 insignificant -0.00186693 0.92956322 insignificant 1.00000 insignificant 0.1409981 0.1406406 0.07752594 16 0.175706 0.1065186 0.0691878 4.5378e-05 3.6881e-01 weaklyHypermeth 3.5177e-04 1.0000e+00 weaklyHypermeth 9.3286e-03 8.5234e-01 weaklyHypermeth 6.6633e-02 1.0000e+00 weaklyHypermeth 0.0690297 6.3041e-02 insignificant 4.5029e-01 insignificant 0.1411994 0.1353265 0.00710429 15 0.1991863 0.2233500 -0.02416372 3.7505e-01 2.4103e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.2134e-01 3.0995e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0106304 6.8266e-01 insignificant 1.0000e+00 insignificant 0.1341176 0.1406406 0.0533222 16 0.184349 0.1065186 0.07783050 4.3065e-02 6.7264e-01 weaklyHypermeth 2.2173e-01 1.0000e+00 insignificant 2.1081e-01 9.8661e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.07089659 5.8058e-02 insignificant 4.4728e-01 insignificant 0.1333620 0.1346457 -2.9307e-03 15 0.1724722 0.1845175 -1.2045e-02 6.4821e-01 1.4098e-02 weaklyHypometh 1.0000e+00 5.3341e-01 insignificant 8.7077e-01 7.6792e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00876349 7.3614e-01 insignificant 1.0000e+00 insignificant 0.1409869 0.1346457 -5.9338e-02 15 0.1141630 0.1845175 -0.07035451 8.0723e-01 7.0054e-02 insignificant 1.0000e+00 3.8853e-01 insignificant 9.9818e-01 1.3492e-01 insignificant 1.0000000 7.9836e-01 insignificant -7.9660e-02 4.9482e-02 weaklyHypometh 4.1581e-01 insignificant chr19 3297350 3298350 52821 BRUNOL5 ENSG00000161082 0.812329 123 6 0.622970 232 6 0.807249 226 6 0.6439815 72 6 0.8656055 91 6 0.835339 173 6 0.8230137 269 6 0.8563104 123 6 0.8567613 160 6 0.889105 177 6 0.815758 272 6 0.8728886 186 6 0.77787108 270 6 NA 0 0 0.8268997 278 6 0.7633652 188 6 0.8153176 172 6 0.7398810 60 6 0.8960349 236 6 0.787293 249 6 0.819048 44 6 0.726190 26 4 0.746734 110 6 0.8877086 58 6 1.000000 13 0 0.8736499 188 6 0.785648 104 6 0.923246 88 6 0.883642 260 6 0.789001 299 6 0.7944662 249 6 0.9202864 373 6 0.0076923 274 6 0.0063920 253 6 0.0000000 221 4 0.0000000 66 6 0.0083333 96 6 0.0046296 294 6 0.757373 126 6 0.8306911 168 6 0.8095238 62 6 0.8357143 141 6 0.5598214 65 6 0.816121 0.6579231 0.798363 0.6579966 0.847959 0.826320 0.8254235 0.8748142 0.849574 0.892714 0.8124266 0.865463 0.8012270 NA 0.8302512 0.7660013 0.8141608 0.7822376 0.9034943 0.783526 0.785877 0.6877706 0.745344 0.9135494 1.0000000 0.8913181 0.787479 0.914025 0.878381 0.8194537 0.7913882 0.9249043 0.0115385 0.0073014 0.0000000 0.0000e+00 0.01344697 0.0069444 0.768957 0.8268053 0.806457 0.8339286 0.5754104 5 0.8172617 0.8636865 -0.04395602 6 0.810958 0.854412 -0.04345402 0.99490369 5.3434e-03 weaklyHypometh 1.00000 0.352197 insignificant 0.97931327 1.9031e-02 weaklyHypometh 1.00000 0.827451 insignificant -0.04011885 0.18074141 insignificant 1.00000 insignificant 0.8172617 0.0066445 0.81180229 6 0.810958 0.0047539 0.8062045 3.9745e-90 1.0000e+00 hypermethylated 3.9745e-88 1.0000e+00 hypermethylated 4.5148e-17 1.0000e+00 hypermethylated 1.7365e-15 1.0000e+00 hypermethylated 0.8011749 1.3587e-20 hypermethylated 1.3587e-17 hypermethylated 0.8172617 0.7793594 0.03090925 6 0.8109584 0.7816274 0.02933103 8.5147e-02 9.4222e-01 insignificant 7.4177e-01 1.0000e+00 insignificant 5.5992e-02 9.4102e-01 insignificant 6.1091e-01 1.00000000 insignificant 0.0470581 4.2649e-01 insignificant 1.0000e+00 insignificant 0.8636865 0.0066445 0.8571375 6 0.854412 0.0047539 0.84965857 9.6383e-70 1.0000e+00 hypermethylated 8.7621e-68 1.0000e+00 hypermethylated 5.6143e-15 1.0000e+00 hypermethylated 2.2457e-13 1.0000000 hypermethylated 0.84129377 8.8026e-13 hypermethylated 1.5211e-10 hypermethylated 0.8636865 0.7793594 7.2230e-02 6 0.8544124 0.7816274 7.2785e-02 3.2821e-03 9.9961e-01 weaklyHypermeth 5.3805e-02 1.0000e+00 weaklyHypermeth 2.3120e-02 9.9933e-01 weaklyHypermeth 3.7901e-01 1.0000e+00 insignificant 0.08717691 1.7743e-01 insignificant 1.0000e+00 insignificant 0.0066445 0.7793594 -7.7300e-01 6 0.0047539 0.7816274 -0.77687352 1.0000e+00 1.0438e-39 hypomethylated 1.0000e+00 1.1597e-37 hypomethylated 1.0000e+00 1.3131e-10 hypomethylated 1.0000000 7.2948e-09 hypomethylated -7.5412e-01 1.2632e-04 hypomethylated 5.2632e-03 hypomethylated chr19 3324950 3325950 52824 NFIC ENSG00000141905 0.770672 160 9 0.576978 279 8 0.746870 332 9 0.7741858 209 6 0.7721384 203 9 0.771671 355 9 0.6973160 330 9 0.7467188 255 9 0.7584028 280 9 0.792674 215 9 0.724950 245 9 0.7885619 210 9 0.67416242 272 8 0.518219 32 2 0.7283639 273 8 0.6728823 192 8 0.8286095 222 8 0.6089364 153 6 0.8243994 238 8 0.708958 240 8 0.823016 133 8 0.727151 118 5 0.762613 235 9 0.7358283 165 8 0.810664 89 5 0.6961186 384 9 0.612932 234 10 0.739286 213 10 0.594425 355 10 0.701167 350 9 0.7115780 374 9 0.8534737 302 9 0.4039249 299 9 0.3227449 227 8 0.4475101 275 8 0.6166667 45 5 0.5025693 238 9 0.6906042 334 9 0.718630 194 9 0.7540609 173 8 0.6174439 164 6 0.8010545 185 7 0.7410026 139 6 0.741404 0.5897235 0.700842 0.7142908 0.696371 0.776152 0.6533151 0.6915189 0.704257 0.772927 0.7167975 0.772478 0.6356842 0.6670350 0.6589000 0.5621396 0.8192602 0.6727391 0.8116221 0.609397 0.775948 0.6283277 0.717439 0.7655880 0.6978638 0.6127688 0.561828 0.665724 0.591190 0.6053279 0.6691323 0.8244011 0.3454066 0.3578072 0.2574291 5.3270e-01 0.49876008 0.6931587 0.649479 0.7293225 0.637461 0.6896008 0.7196938 4 0.7422790 0.7382665 -0.00520936 9 0.732436 0.743417 -0.01098079 0.48422161 3.9910e-03 weaklyHypometh 1.00000 0.315485 insignificant 0.37539727 6.4207e-03 weaklyHypometh 1.00000 0.614646 insignificant -0.00640438 0.82574797 insignificant 1.00000 insignificant 0.7422790 0.4706714 0.23522577 9 0.732436 0.4896858 0.2427499 3.3511e-24 1.0000e+00 hypermethylated 6.9814e-23 1.0000e+00 hypermethylated 3.6552e-05 9.9994e-01 hypermethylated 4.2503e-04 1.0000e+00 hypermethylated 0.2269468 8.0212e-03 weaklyHypermeth 8.4434e-02 weaklyHypermeth 0.7422790 0.6397661 0.02000834 9 0.7324357 0.7318164 0.00061937 3.1864e-01 1.4486e-03 inconclusive 1.0000e+00 7.6240e-02 inconclusive 3.3819e-01 2.5474e-03 inconclusive 1.0000e+00 0.15921509 insignificant -0.0021549 9.5311e-01 insignificant 1.0000e+00 insignificant 0.7313686 0.4696756 0.2417819 9 0.681196 0.4407172 0.24047886 4.2517e-19 9.9990e-01 hypermethylated 8.8577e-18 1.0000e+00 hypermethylated 7.4328e-06 9.9989e-01 hypermethylated 1.1435e-04 1.0000000 hypermethylated 0.23335114 6.6412e-03 weaklyHypermeth 7.6335e-02 weaklyHypermeth 0.7382665 0.6397661 1.5498e-03 9 0.7434165 0.7318164 1.1600e-02 4.3375e-01 6.3211e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 6.6541e-01 1.9682e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00424953 9.1293e-01 insignificant 1.0000e+00 insignificant 0.4706714 0.6397661 -1.7615e-01 9 0.4896858 0.7318164 -0.24213056 9.9925e-01 2.4085e-09 weaklyHypometh 1.0000e+00 5.2358e-08 weaklyHypometh 9.9881e-01 9.1922e-04 weaklyHypometh 1.0000000 1.3322e-02 weaklyHypometh -2.2910e-01 7.5738e-03 weaklyHypometh 1.0820e-01 insignificant chr19 3326750 3327750 52825 NFIC ENSG00000141905 0.567957 194 6 0.777027 207 6 0.666623 127 7 0.6380765 139 6 0.7072511 31 3 0.705147 268 6 0.6688312 57 4 0.6984761 176 7 0.7068814 101 4 0.860199 101 7 0.757320 256 7 0.6309524 19 1 0.68360232 171 7 0.719780 24 1 0.5519502 84 4 0.6111111 13 0 0.5166667 13 1 0.6871706 287 8 0.8149232 211 6 0.609436 242 7 0.733333 45 3 0.365663 63 3 0.683704 179 7 0.6187466 82 4 0.762915 44 4 0.7008248 307 7 0.459980 111 7 0.787202 23 1 0.679552 180 6 0.691392 302 7 0.7254103 307 7 0.6872891 248 6 0.1719958 295 7 0.1787546 229 7 0.0347222 205 6 0.0238636 73 4 0.0801573 172 7 0.3011814 394 7 0.627459 165 7 0.6097496 312 7 0.6192354 130 7 0.4904381 136 5 0.5439596 164 7 0.606501 0.6471668 0.544027 0.6636132 0.759319 0.721329 0.6001609 0.6608071 0.668123 0.779391 0.7334923 0.636431 0.6536046 0.6546307 0.5408062 0.5440406 0.6959876 0.5932080 0.7641331 0.647598 0.801032 0.5197261 0.624622 0.8099919 0.7628051 0.6851005 0.484346 0.714707 0.608464 0.5998340 0.6159241 0.7484163 0.0437755 0.1824370 0.0096397 3.9047e-02 0.05308316 0.1299557 0.591005 0.5874108 0.643664 0.5114155 0.4468292 2 0.6702206 0.6548438 0.02724051 6 0.703829 0.675910 0.02791921 0.24644345 9.9842e-01 insignificant 1.00000 1.000000 insignificant 0.67374174 9.8983e-01 insignificant 1.00000 1.000000 insignificant 0.02096802 0.61211660 lowCoverage 1.00000 lowCoverage 0.6772467 0.1059942 0.58209252 6 0.717765 0.2080903 0.5096750 8.7120e-53 1.0000e+00 hypermethylated 3.3508e-51 1.0000e+00 hypermethylated 4.1629e-15 1.0000e+00 hypermethylated 1.3009e-13 1.0000e+00 hypermethylated 0.5471899 7.4773e-06 lowCoverage 1.9677e-04 lowCoverage 0.6703418 0.5501654 0.12396851 6 0.7285102 0.5643531 0.16415703 2.9279e-04 9.9860e-01 weaklyHypermeth 5.7410e-03 1.0000e+00 weaklyHypermeth 6.6608e-02 9.9981e-01 insignificant 6.7967e-01 1.00000000 insignificant 0.1008006 1.3356e-02 lowCoverage 2.6187e-01 lowCoverage 0.6548250 0.1059942 0.5622171 7 0.679376 0.2080903 0.47128608 6.2016e-36 1.0000e+00 hypermethylated 2.3852e-34 1.0000e+00 hypermethylated 1.7597e-13 1.0000e+00 hypermethylated 5.8657e-12 1.0000000 hypermethylated 0.52622188 8.8897e-07 hypermethylated 3.8651e-05 hypermethylated 0.6548438 0.5491713 1.0109e-01 7 0.6759101 0.5247489 1.5116e-01 8.0787e-03 9.8662e-01 weaklyHypermeth 1.1378e-01 1.0000e+00 insignificant 3.9880e-02 9.9747e-01 weaklyHypermeth 5.2474e-01 1.0000e+00 insignificant 0.07983259 9.3730e-02 insignificant 1.0000e+00 insignificant 0.1059942 0.5498891 -4.5795e-01 7 0.2080903 0.5965297 -0.38843945 1.0000e+00 1.8181e-22 hypomethylated 1.0000e+00 8.2642e-21 hypomethylated 1.0000e+00 5.9904e-09 hypomethylated 1.0000000 2.0657e-07 hypomethylated -4.4639e-01 2.1405e-05 hypomethylated 1.9434e-03 hypomethylated chr19 3335250 3336250 52826 NFIC ENSG00000141905 0.547223 206 12 0.474801 274 13 0.443112 185 13 0.4464932 179 13 0.4709972 177 13 0.623187 343 13 0.4982553 200 14 0.5193053 256 13 0.3686032 282 13 0.509764 185 12 0.647797 403 14 0.5659893 120 7 0.42867712 280 11 0.526273 134 12 0.5209492 253 9 0.4353404 89 11 0.2576463 226 6 0.5651390 231 14 0.4744511 203 13 0.513934 205 10 0.461493 139 11 0.246896 204 8 0.419537 169 13 0.3894415 212 13 0.550021 239 12 0.4543966 329 13 0.401834 371 12 0.220195 122 11 0.584527 174 13 0.407003 382 13 0.4920523 321 14 0.5753299 294 13 0.2834560 309 13 0.2451299 178 13 0.2794329 228 13 0.4491046 87 6 0.2552699 228 14 0.3931331 323 14 0.417703 213 12 0.3854558 240 13 0.4654230 288 13 0.4163738 215 10 0.4800357 212 13 0.482414 0.4283416 0.434677 0.3988632 0.436285 0.513339 0.4198723 0.4170020 0.355017 0.410739 0.5400154 0.509716 0.3086010 0.5356671 0.3403991 0.3645981 0.2468491 0.5057805 0.3215688 0.416455 0.467140 0.2135968 0.382840 0.3375535 0.4155885 0.3503590 0.311845 0.285959 0.480556 0.2946345 0.3367861 0.5267913 0.2154286 0.1892241 0.1876129 2.9782e-01 0.19497948 0.3901866 0.322827 0.3253110 0.355806 0.3245631 0.3887495 7 0.4189312 0.3750000 0.05749929 13 0.545465 0.433677 0.11178801 0.00020347 9.9920e-01 weaklyHypermeth 0.10174 1.000000 insignificant 0.00211766 9.9973e-01 weaklyHypermeth 0.70589 1.000000 insignificant 0.05833633 0.14556726 insignificant 1.00000 insignificant 0.4189312 0.2899408 0.15968016 13 0.545465 0.3735069 0.1719579 1.1368e-13 1.0000e+00 weaklyHypermeth 1.5789e-12 1.0000e+00 weaklyHypermeth 6.4268e-11 1.0000e+00 weaklyHypermeth 1.6067e-09 1.0000e+00 weaklyHypermeth 0.1743091 1.8288e-03 weaklyHypermeth 2.5400e-02 weaklyHypermeth 0.4187995 0.3758562 0.07587825 12 0.5151624 0.4183552 0.09680727 4.0857e-04 9.6108e-01 weaklyHypermeth 7.2552e-03 1.0000e+00 weaklyHypermeth 4.1479e-03 9.8021e-01 weaklyHypermeth 8.9475e-02 1.00000000 weaklyHypermeth 0.0588987 3.8450e-02 weaklyHypermeth 5.1266e-01 insignificant 0.3744926 0.2897265 0.1117219 13 0.408166 0.3515359 0.05663047 8.0454e-06 9.9993e-01 weaklyHypermeth 7.5190e-05 1.0000e+00 weaklyHypermeth 4.5231e-06 9.9997e-01 weaklyHypermeth 7.1795e-05 1.0000000 weaklyHypermeth 0.11597276 2.9186e-02 weaklyHypermeth 2.7024e-01 insignificant 0.3751696 0.3758562 1.2379e-02 12 0.4459219 0.4183552 2.7567e-02 3.6129e-01 5.1441e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.5208e-01 4.8596e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00056233 9.8822e-01 insignificant 1.0000e+00 insignificant 0.2896296 0.3758562 -9.0543e-02 12 0.3650740 0.4183552 -0.05328113 9.9999e-01 3.0529e-06 weaklyHypometh 1.0000e+00 4.2402e-05 weaklyHypometh 1.0000e+00 4.2068e-05 weaklyHypometh 1.0000000 9.5610e-04 weaklyHypometh -1.1541e-01 1.8369e-02 weaklyHypometh 1.9967e-01 insignificant chr19 3354250 3355250 52829 NFIC ENSG00000141905 0.804077 725 27 0.730250 685 28 0.746737 961 28 0.8356263 453 19 0.8023408 558 27 0.739021 861 28 0.8469561 952 30 0.7736947 673 29 0.7600638 835 30 0.774487 753 30 0.839572 857 31 0.7860607 640 31 0.81971837 864 30 NA 0 0 0.8511486 817 31 0.7867067 428 25 0.7641656 580 29 0.7857249 582 21 0.8628761 906 31 0.765106 935 28 0.700517 315 28 0.663925 248 17 0.790949 864 29 0.6491165 316 26 0.774345 170 19 0.7651454 950 29 0.717118 507 31 0.783079 321 23 0.788560 802 29 0.848370 997 28 0.8039441 904 28 0.7934246 1124 29 0.0244982 1303 30 0.0199332 1121 31 0.0789746 391 15 0.0560510 346 26 0.0663281 400 28 0.0422099 1307 29 0.845697 688 21 0.8174470 1006 29 0.8181421 578 21 0.8292290 827 20 0.7571502 750 26 0.796785 0.7702968 0.788619 0.8794256 0.803730 0.816328 0.8722345 0.8071387 0.804558 0.829054 0.8341395 0.817023 0.8478728 NA 0.8662079 0.7921984 0.7585183 0.7627800 0.8823172 0.795319 0.748055 0.7069361 0.850001 0.6974779 0.8228554 0.8038588 0.782290 0.807648 0.824232 0.8461338 0.8238572 0.8158897 0.0224449 0.0173919 0.0383536 4.0721e-02 0.07407185 0.0358292 0.830780 0.7819875 0.839924 0.8298186 0.7465000 16 0.8321360 0.8245871 0.00989371 29 0.790486 0.760163 0.03032332 0.01131661 9.0819e-01 weaklyHypermeth 1.00000 1.000000 insignificant 0.02952480 8.8715e-01 weaklyHypermeth 1.00000 1.000000 insignificant 0.03684492 0.07859834 insignificant 1.00000 insignificant 0.8321360 0.0264996 0.80505063 31 0.790486 0.0422500 0.7482364 0.0000e+00 1.0000e+00 hypermethylated 0.0000e+00 1.0000e+00 hypermethylated 3.4171e-70 1.0000e+00 hypermethylated 3.4171e-67 1.0000e+00 hypermethylated 0.7453868 8.5942e-19 hypermethylated 4.2971e-16 hypermethylated 0.8321126 0.8032744 0.03105221 21 0.7892595 0.8076737 -0.01841413 8.6601e-03 7.2605e-04 weaklyHypermeth 1.0547e-01 4.8403e-02 weaklyHypermeth 5.0723e-02 6.8767e-04 inconclusive 5.8302e-01 0.07338074 inconclusive -0.0201470 2.8754e-01 insignificant 1.0000e+00 insignificant 0.8245871 0.0264996 0.7977702 29 0.760163 0.0422500 0.71791304 3.1978e-281 1.0000e+00 hypermethylated 3.1978e-278 1.0000e+00 hypermethylated 6.8182e-58 1.0000e+00 hypermethylated 6.8182e-55 1.0000000 hypermethylated 0.70854190 2.6370e-16 hypermethylated 2.6370e-13 hypermethylated 0.8245871 0.8032233 2.3998e-02 21 0.7601631 0.8016635 -4.1500e-02 1.2255e-02 1.6169e-04 weaklyHypermeth 1.5512e-01 2.3099e-02 weaklyHypermeth 3.0110e-01 2.8748e-05 inconclusive 1.0000e+00 9.5828e-03 inconclusive -0.05699192 2.7364e-02 weaklyHypometh 6.6742e-01 insignificant 0.0264996 0.8032233 -7.8664e-01 21 0.0422500 0.8016635 -0.75941343 1.0000e+00 3.8861e-184 hypomethylated 1.0000e+00 3.8861e-181 hypomethylated 1.0000e+00 5.5673e-39 hypomethylated 1.0000000 5.5673e-36 hypomethylated -7.6553e-01 9.9077e-10 hypomethylated 4.9538e-07 hypomethylated chr19 3386050 3387050 52830 NFIC ENSG00000141905 0.089474 778 22 0.068870 1058 28 0.079052 1401 28 0.0711121 734 25 0.0648331 416 18 0.080590 1409 31 0.1149214 818 18 0.0704028 779 18 0.0967509 905 18 0.083778 631 21 0.088445 714 21 0.0623462 586 16 0.07776515 633 18 0.179085 77 6 0.0643722 658 18 0.0844424 623 18 0.0070626 708 13 0.0741806 777 26 0.0970991 787 18 0.092443 1118 29 0.080989 401 21 0.053086 510 21 0.091297 814 28 0.0550965 489 20 0.072916 514 21 0.0904339 1571 31 0.130263 567 21 0.065136 300 20 0.080138 638 21 0.087081 1638 31 0.0890951 1530 31 0.0897045 1244 24 0.1231567 1068 28 0.0917720 523 18 0.1847926 437 19 0.0608108 343 18 0.1653647 514 18 0.0835043 1135 31 0.095113 1014 21 0.0760417 911 22 0.0630956 630 18 0.0794613 825 18 0.0785131 867 27 0.044422 0.0407088 0.039733 0.0467158 0.038437 0.073362 0.0482326 0.0378571 0.044683 0.044999 0.0517725 0.032109 0.0366761 0.0439822 0.0291047 0.0430493 0.0440100 0.0385297 0.0520691 0.066075 0.045801 0.0259383 0.068572 0.0292953 0.0348591 0.0479725 0.042999 0.045629 0.038988 0.0420805 0.0482052 0.0631361 0.1032509 0.0468448 0.1462647 2.9011e-02 0.10335929 0.0521420 0.048250 0.0453119 0.037167 0.0316349 0.0566328 18 0.0680974 0.0789809 0.00396937 23 0.079953 0.083215 -0.00326211 0.99971105 7.8717e-01 insignificant 1.00000 1.000000 insignificant 0.99999128 8.4402e-01 insignificant 1.00000 1.000000 insignificant 0.00024839 0.97838340 insignificant 1.00000 insignificant 0.0681323 0.1352092 -0.03986037 23 0.089359 0.1005741 -0.0112153 9.9135e-01 9.5687e-04 weaklyHypometh 1.0000e+00 7.3606e-02 weaklyHypometh 9.9977e-01 3.5163e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0358822 1.3742e-01 insignificant 8.0365e-01 insignificant 0.0680944 0.0565105 0.00766108 18 0.0872538 0.0767951 0.01045861 7.4741e-01 9.2272e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.0907e-01 9.8317e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0039063 6.5524e-01 insignificant 1.0000e+00 insignificant 0.0790196 0.1353907 -0.0425757 28 0.087838 0.1227645 -0.03492667 8.3216e-01 1.0425e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8419e-01 8.3946e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.03613061 1.3319e-01 insignificant 8.2725e-01 insignificant 0.0790250 0.0565105 3.4780e-03 21 0.0885643 0.0767951 1.1769e-02 5.9208e-01 9.9952e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.0754e-01 9.9993e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00365795 6.4585e-01 insignificant 1.0000e+00 insignificant 0.1353777 0.0565105 5.6316e-02 18 0.1103071 0.0767951 0.03351196 3.6681e-01 9.9821e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.9844e-01 1.0000e+00 insignificant 1.0000000 1.0000e+00 insignificant 3.9789e-02 1.0388e-01 insignificant 6.9720e-01 insignificant chr19 3402950 3403950 52831 NFIC ENSG00000141905 0.900771 275 14 0.878947 272 15 0.780594 314 14 0.9514131 143 8 0.8020581 252 14 0.870130 405 14 0.9342376 248 14 0.8548196 137 11 0.8914748 202 14 0.964079 251 14 0.886577 412 16 0.8247883 219 13 0.90630002 211 12 0.933333 39 2 0.9337915 377 14 0.9202005 236 12 0.9083731 154 12 0.8306606 212 9 0.9108335 356 14 0.910264 408 14 0.888529 181 14 0.900000 34 2 0.866518 276 15 0.8743760 174 12 0.627473 40 3 0.8893652 253 14 0.913074 228 14 0.826154 119 14 0.831848 209 12 0.936993 229 13 0.9424933 189 12 0.9450115 534 14 0.8146604 266 12 0.8321547 408 14 0.9055236 611 16 0.8099206 42 4 0.7839184 205 14 0.9657073 229 14 0.835298 318 14 0.9421211 375 14 0.9450179 188 7 0.8335560 292 12 0.8454482 139 10 0.908778 0.8553897 0.900708 0.9337251 0.892928 0.883903 0.9160735 0.8834265 0.902791 0.960220 0.8952791 0.874027 0.9049730 NA 0.9361845 0.9269183 0.9061879 0.8269520 0.9162648 0.938037 0.889107 0.8817516 0.939814 0.9030392 0.6473849 0.9107558 0.896796 0.912200 0.862370 0.9019289 0.9314913 0.9478224 0.8863307 0.8394997 0.8540473 7.7420e-01 0.84171609 0.9802511 0.909219 0.9407795 0.931635 0.9004322 0.9263218 5 0.9009766 0.9006488 -0.00242062 14 0.841699 0.864783 -0.02308455 0.81236095 8.3933e-01 insignificant 1.00000 1.000000 insignificant 0.85480159 8.3126e-01 insignificant 1.00000 1.000000 insignificant 0.01952942 0.48267213 insignificant 1.00000 insignificant 0.9008006 0.8813174 0.02119241 14 0.799614 0.8375589 -0.0379453 1.6081e-02 7.8161e-01 weaklyHypermeth 8.2894e-02 1.0000e+00 weaklyHypermeth 3.8464e-01 8.2797e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0377014 2.5672e-01 insignificant 1.0000e+00 insignificant 0.9013479 0.9047256 -0.01086444 13 0.8943301 0.7753668 0.11896331 9.2349e-01 4.5703e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.5049e-01 6.2377e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0093941 7.5117e-01 insignificant 1.0000e+00 insignificant 0.9006488 0.8818182 0.0242497 14 0.864783 0.8816410 -0.01685790 1.5876e-01 8.0192e-01 insignificant 7.1524e-01 1.0000e+00 insignificant 6.1174e-01 8.5230e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.01817202 6.3736e-01 insignificant 1.0000e+00 insignificant 0.9008936 0.9088821 -1.3359e-02 13 0.8711599 0.8184427 5.2717e-02 9.5649e-01 5.2970e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7289e-01 5.6679e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01013534 7.8259e-01 insignificant 1.0000e+00 insignificant 0.8817510 0.9088821 -2.9837e-02 13 0.8750655 0.8184427 0.05662275 9.6610e-01 4.4859e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7495e-01 7.3683e-01 insignificant 1.0000000 1.0000e+00 insignificant -2.8307e-02 4.7934e-01 insignificant 1.0000e+00 insignificant chr19 3408950 3409950 52832 NFIC ENSG00000141905 0.475037 269 8 0.219723 182 6 0.231102 244 6 0.2561578 321 8 0.3683853 135 6 0.306123 380 8 0.3273585 213 7 0.1667103 243 6 0.2466027 312 6 0.301440 272 6 0.228519 168 6 0.4166422 188 6 0.11739994 236 6 0.255636 182 6 0.2767025 355 6 0.3883230 134 6 0.3378289 57 4 0.2945420 376 8 0.3185237 234 8 0.155018 288 8 0.195238 100 6 0.176631 149 6 0.155970 245 6 0.2084725 142 7 0.180924 172 6 0.1355151 256 8 0.343112 263 6 0.239542 153 6 0.426033 179 6 0.143850 340 8 0.1900794 294 8 0.4602790 259 8 0.3565763 167 6 0.5299804 252 6 0.2860624 107 4 0.2011905 159 6 0.3825792 188 7 0.3649593 280 9 0.285138 331 8 0.3074348 351 8 0.3286617 268 8 0.4189451 397 8 0.3147157 288 8 0.403286 0.1563177 0.351733 0.2480965 0.270524 0.205186 0.2941335 0.1890702 0.157833 0.306149 0.2921737 0.354514 0.0700076 0.2649688 0.1536936 0.3855149 0.2961509 0.2949266 0.2079532 0.107408 0.242164 0.1955739 0.239703 0.1286048 0.1888321 0.1581034 0.177875 0.197280 0.315095 0.1051880 0.1902988 0.3324910 0.3415156 0.5536478 0.2955230 1.9796e-01 0.31899880 0.2711846 0.274854 0.2594567 0.252432 0.2482227 0.2579959 6 0.2458708 0.1947389 0.04338748 6 0.295629 0.212521 0.08310745 0.01305037 9.8851e-01 weaklyHypermeth 1.00000 1.000000 insignificant 0.07678590 9.7598e-01 insignificant 1.00000 1.000000 insignificant 0.04641820 0.23102692 insignificant 1.00000 insignificant 0.2458159 0.3741319 -0.11880586 8 0.304754 0.4115977 -0.1068435 5.8788e-03 6.7946e-10 weaklyHypometh 3.4786e-02 1.1324e-07 weaklyHypometh 3.1820e-02 1.3131e-03 weaklyHypometh 2.0139e-01 1.6414e-01 insignificant -0.0691692 1.9951e-01 insignificant 1.0000e+00 insignificant 0.2458708 0.2761788 -0.01503999 8 0.2956285 0.3081245 -0.01249595 6.5821e-01 1.4605e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.0714e-01 1.5408e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0465904 1.5480e-01 insignificant 1.0000e+00 insignificant 0.1954295 0.3741319 -0.1806592 6 0.255025 0.4115977 -0.15657247 2.9159e-01 3.6135e-09 weaklyHypometh 1.0000e+00 7.2270e-07 weaklyHypometh 1.4496e-01 9.7340e-03 weaklyHypometh 7.5108e-01 1.0000000 insignificant -0.11558744 6.0909e-02 insignificant 4.5454e-01 insignificant 0.1945098 0.2758410 -5.8212e-02 6 0.1821609 0.2641067 -8.1946e-02 9.9770e-01 6.4614e-03 weaklyHypometh 1.0000e+00 3.5583e-01 insignificant 9.9922e-01 1.9295e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.09300856 3.2454e-02 weaklyHypometh 7.3758e-01 insignificant 0.3741319 0.2764128 1.1297e-01 8 0.4115977 0.3447493 0.06684839 3.5782e-03 2.4568e-02 weaklyHypermeth 2.3855e-01 1.5365e-01 insignificant 1.1800e-01 5.4307e-02 insignificant 1.0000000 3.8516e-01 insignificant 2.2579e-02 6.6636e-01 insignificant 1.0000e+00 insignificant chr19 3416650 3417650 52833 NFIC ENSG00000141905 0.611583 164 7 0.597549 259 8 0.515317 198 7 0.6266826 132 5 0.6311575 153 8 0.629867 278 8 0.6621224 224 8 0.6381688 189 7 0.6274233 207 7 0.663479 135 7 0.723114 330 8 0.6527331 120 7 0.62178538 236 7 0.975000 41 1 0.7064023 205 7 0.5389137 68 5 0.6934028 81 8 0.5941770 132 6 0.7284832 293 7 0.668348 234 7 0.626928 109 6 0.342638 57 4 0.534368 201 8 0.6251190 102 7 0.625000 19 1 0.5462732 307 8 0.551774 200 7 0.733974 76 7 0.680201 230 7 0.547299 367 8 0.5465303 342 8 0.6960214 241 8 0.3851138 236 6 0.4665441 240 7 0.3333333 104 3 0.1013889 34 3 0.5946128 154 5 0.4568547 278 7 0.597975 175 6 0.6197169 251 8 0.6253133 95 3 0.5801115 139 5 0.6177744 116 4 0.719417 0.6472545 0.605221 0.7222378 0.682864 0.710836 0.6771986 0.6970300 0.657822 0.780740 0.7353792 0.661307 0.7144051 NA 0.6926110 0.7139192 0.6040252 0.6910168 0.7915255 0.708736 0.623373 0.4459965 0.601641 0.5963272 0.8100263 0.6818174 0.605927 0.777155 0.707901 0.6837648 0.6269598 0.7094922 0.3472766 0.3316561 0.2378729 7.3971e-02 0.51190677 0.3398789 0.597468 0.6772406 0.728463 0.5872821 0.6516142 1 0.7056265 0.6451756 0.03440253 7 0.669433 0.565646 0.10378718 0.00302012 9.1906e-01 weaklyHypermeth 0.43145 1.000000 insignificant 0.04309739 9.6335e-01 weaklyHypermeth 1.00000 1.000000 insignificant 0.06727499 0.07597076 insignificant 1.00000 insignificant 0.7055465 0.3377990 0.40897656 7 0.632703 0.4115590 0.2211440 2.4512e-27 5.8352e-03 hypermethylated 5.5710e-26 2.8058e-01 hypermethylated 3.2067e-08 6.4208e-01 hypermethylated 6.5442e-07 1.0000e+00 hypermethylated 0.2656442 9.7850e-03 weaklyHypermeth 9.8839e-02 weaklyHypermeth 0.7056583 0.6121134 0.07517640 6 0.6492910 0.6099536 0.03933735 1.0067e-02 3.4176e-01 weaklyHypermeth 1.1985e-01 1.0000e+00 insignificant 8.9950e-02 2.1248e-01 insignificant 8.8331e-01 1.00000000 insignificant 0.0471073 4.6175e-02 weaklyHypermeth 5.8823e-01 insignificant 0.6454626 0.3374761 0.3785313 7 0.598979 0.3704031 0.22857579 1.0778e-17 1.2014e-02 hypermethylated 2.1133e-16 1.0000e+00 hypermethylated 1.4578e-05 6.2465e-01 hypermethylated 2.1127e-04 1.0000000 hypermethylated 0.19836921 3.1943e-02 weaklyHypermeth 2.9039e-01 insignificant 0.6462979 0.6121134 2.3769e-02 7 0.6237236 0.6099536 1.3770e-02 2.8733e-01 6.8845e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.4664e-01 3.0223e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02016771 5.2327e-01 insignificant 1.0000e+00 insignificant 0.3384468 0.6121134 -3.3978e-01 6 0.4630039 0.6099536 -0.14694970 6.5286e-02 1.6662e-09 hypomethylated 1.0000e+00 3.7867e-08 hypomethylated 3.4896e-01 7.7846e-05 hypomethylated 1.0000000 1.5887e-03 hypomethylated -2.1854e-01 2.3282e-02 weaklyHypometh 2.3517e-01 insignificant chr19 3621750 3622750 52837 C19orf29 ENSG00000105298 0.778256 464 15 0.627859 329 18 0.832105 365 17 0.7892620 474 17 0.7231876 230 16 0.887725 681 18 0.7287604 271 16 0.6694900 416 20 0.6494723 257 15 0.877338 360 17 0.815562 529 20 0.7440218 172 14 0.46071479 387 14 0.696054 241 13 0.5367935 409 17 0.5040179 70 8 0.6067544 579 5 0.4303983 630 13 0.7138510 687 16 0.769459 571 16 0.878144 293 20 0.594767 276 14 0.736182 481 19 0.7340637 204 15 0.848494 275 17 0.6936432 465 17 0.564603 569 18 0.629753 204 18 0.801596 493 15 0.698256 479 20 0.6110661 443 20 0.8974300 747 18 0.1357874 475 18 0.0726138 605 16 0.1284874 603 16 0.3865178 164 14 0.0853997 577 18 0.4827396 766 20 0.578076 397 14 0.5461862 553 17 0.6147031 316 14 0.6050410 497 12 0.7422025 371 13 0.835669 0.6108417 0.800845 0.8047618 0.740583 0.881094 0.6805966 0.7475507 0.706464 0.876023 0.8226915 0.736157 0.4967073 0.8000692 0.7163049 0.5615138 0.7807229 0.4903770 0.6493201 0.793100 0.905369 0.5182325 0.835699 0.7960309 0.7830119 0.7611262 0.684007 0.667814 0.832969 0.5836198 0.5471816 0.8735996 0.0832673 0.0475547 0.0675511 3.3465e-01 0.03427082 0.4145363 0.555670 0.5920333 0.560004 0.6539451 0.7156438 11 0.7566835 0.7481226 0.01319062 17 0.613664 0.643053 -0.02938923 0.87445455 9.9741e-01 insignificant 1.00000 1.000000 insignificant 0.99632480 9.6918e-01 insignificant 1.00000 1.000000 insignificant -0.03194560 0.47457801 insignificant 1.00000 insignificant 0.7574374 0.1840125 0.57533804 17 0.681580 0.2004403 0.4811396 3.0844e-79 1.0000e+00 hypermethylated 2.5703e-77 1.0000e+00 hypermethylated 2.9624e-29 1.0000e+00 hypermethylated 4.9374e-27 1.0000e+00 hypermethylated 0.4767965 5.0045e-04 hypermethylated 8.3409e-03 hypermethylated 0.7579350 0.5627929 0.16333581 13 0.7275988 0.5269166 0.20068217 2.4839e-11 9.9976e-01 weaklyHypermeth 2.0699e-09 1.0000e+00 weaklyHypermeth 4.8816e-05 9.9659e-01 weaklyHypermeth 1.9527e-03 1.00000000 weaklyHypermeth 0.0748123 1.2102e-01 insignificant 1.0000e+00 insignificant 0.7485749 0.1840125 0.5552426 18 0.652016 0.2004403 0.45157621 5.9068e-64 1.0000e+00 hypermethylated 4.2192e-62 1.0000e+00 hypermethylated 5.4138e-29 1.0000e+00 hypermethylated 1.8046e-26 1.0000000 hypermethylated 0.50874212 3.0004e-04 hypermethylated 5.2639e-03 hypermethylated 0.7491346 0.5627929 1.3925e-01 13 0.7007980 0.5269166 1.7388e-01 3.6104e-09 9.9988e-01 weaklyHypermeth 2.5789e-07 1.0000e+00 weaklyHypermeth 5.3316e-05 9.9993e-01 weaklyHypermeth 2.7638e-03 1.0000e+00 weaklyHypermeth 0.10675785 4.2318e-02 weaklyHypermeth 8.1382e-01 insignificant 0.1842436 0.5630567 -4.5008e-01 13 0.2244931 0.5479933 -0.32350020 9.9992e-01 9.1949e-28 hypomethylated 1.0000e+00 5.9717e-26 hypomethylated 1.0000e+00 5.5516e-14 hypomethylated 1.0000000 6.9395e-12 hypomethylated -4.0198e-01 1.3664e-03 weaklyHypometh 3.1054e-02 weaklyHypometh chr19 3621850 3622850 52838 C19orf29 ENSG00000105298 0.767168 463 15 0.597459 305 16 0.813449 363 17 0.7659593 459 15 0.7511263 223 16 0.875907 677 18 0.7113316 259 14 0.6591769 398 18 0.6160887 255 15 0.906066 357 17 0.797119 513 18 0.7120245 168 14 0.46071479 387 14 0.696054 241 13 0.5879167 405 17 0.5040179 70 8 0.6067544 579 5 0.4303983 630 13 0.7005751 681 16 0.832887 565 16 0.865317 282 18 0.594767 276 14 0.777858 468 17 0.7087365 200 15 0.823243 262 15 0.6657926 459 17 0.562048 560 18 0.645972 189 16 0.789125 486 15 0.677075 461 18 0.5898625 427 18 0.8860333 743 18 0.1369860 468 18 0.0806820 601 16 0.1427637 601 16 0.3380535 148 12 0.0922317 574 18 0.4808217 746 18 0.578076 397 14 0.5510480 551 17 0.5741456 312 14 0.6050410 497 12 0.7466449 361 11 0.835669 0.6108417 0.800845 0.8047618 0.740583 0.881094 0.6805966 0.7475507 0.706464 0.876023 0.8226915 0.736157 0.4967073 0.8000692 0.7163049 0.5615138 0.7807229 0.4903770 0.6493201 0.793100 0.905369 0.5182325 0.835699 0.7960309 0.7830119 0.7611262 0.684007 0.667814 0.832969 0.5836198 0.5471816 0.8735996 0.0832673 0.0475547 0.0675511 3.3465e-01 0.03427082 0.4145363 0.555670 0.5920333 0.560004 0.6539451 0.7156438 11 0.7552859 0.7462066 0.01319534 17 0.609443 0.638519 -0.02907557 0.84871665 9.9708e-01 insignificant 1.00000 1.000000 insignificant 0.99328872 9.5406e-01 insignificant 1.00000 1.000000 insignificant -0.02587615 0.55749151 insignificant 1.00000 insignificant 0.7558897 0.1797323 0.57814513 17 0.673621 0.1873136 0.4863071 1.1342e-76 1.0000e+00 hypermethylated 7.5612e-75 1.0000e+00 hypermethylated 8.1198e-27 1.0000e+00 hypermethylated 1.0150e-24 1.0000e+00 hypermethylated 0.4776866 2.7519e-04 hypermethylated 5.0961e-03 hypermethylated 0.7562657 0.5613787 0.16372630 13 0.7155772 0.5083264 0.20725081 2.9286e-11 9.9949e-01 weaklyHypermeth 2.2528e-09 1.0000e+00 weaklyHypermeth 4.5713e-05 9.9470e-01 weaklyHypermeth 1.9047e-03 1.00000000 weaklyHypermeth 0.0786185 1.1500e-01 insignificant 1.0000e+00 insignificant 0.7462500 0.1797323 0.5586961 18 0.632110 0.1873136 0.44479669 1.9210e-61 1.0000e+00 hypermethylated 1.2807e-59 1.0000e+00 hypermethylated 1.5163e-26 1.0000e+00 hypermethylated 3.0326e-24 1.0000000 hypermethylated 0.50356275 1.7776e-04 hypermethylated 3.4855e-03 hypermethylated 0.7468249 0.5613787 1.3965e-01 13 0.6882101 0.5083264 1.7988e-01 4.2915e-09 9.9977e-01 weaklyHypermeth 2.8610e-07 1.0000e+00 weaklyHypermeth 5.5277e-05 9.9988e-01 weaklyHypermeth 2.7638e-03 1.0000e+00 weaklyHypermeth 0.10449468 5.0258e-02 insignificant 8.2926e-01 insignificant 0.1798469 0.5616438 -4.5182e-01 13 0.2036018 0.5304275 -0.32682575 9.9966e-01 9.5548e-28 hypomethylated 1.0000e+00 5.9717e-26 hypomethylated 1.0000e+00 2.1979e-13 hypomethylated 1.0000000 2.4421e-11 hypomethylated -3.9907e-01 8.5783e-04 hypomethylated 2.1750e-02 hypomethylated chr19 3634650 3635650 52839 C19orf29 ENSG00000105298 0.468191 185 11 0.201747 266 11 0.289384 393 11 0.3905883 154 7 0.2800962 195 9 0.542318 215 10 0.2777101 366 9 0.4293770 179 9 0.2855382 250 9 0.262294 251 9 0.394545 385 9 0.3236178 302 9 0.13740470 288 9 NA 0 0 0.2723008 235 9 0.2434886 217 8 0.1984571 254 8 0.2602811 173 9 0.2241863 195 9 0.397217 203 11 0.540327 109 8 0.390807 75 6 0.376985 243 11 0.4388782 105 8 0.472282 64 5 0.3252944 283 11 0.416271 117 8 0.295349 80 6 0.424442 113 8 0.246276 304 11 0.2907456 265 10 0.3334292 289 11 0.4422829 247 10 0.5772443 166 9 0.6104672 207 9 0.3610750 73 6 0.5386866 94 7 0.3918385 204 10 0.382570 108 8 0.5589290 242 10 0.4322222 108 10 0.4031426 158 9 0.4433170 168 10 0.508764 0.2204088 0.299020 0.3609815 0.298190 0.530412 0.2763363 0.3899194 0.286187 0.260724 0.3874452 0.302766 0.1400843 NA 0.2420268 0.2250268 0.1972419 0.2236238 0.2308972 0.388950 0.477575 0.3391580 0.390085 0.3900276 0.4502019 0.3653568 0.444217 0.294778 0.419856 0.1985135 0.2968274 0.3785303 0.3680976 0.5002926 0.5722241 2.6292e-01 0.50808451 0.4596670 0.417277 0.5705053 0.410336 0.3499945 0.4154831 6 0.2966426 0.3390327 -0.04965178 10 0.304905 0.335682 -0.03077705 0.94992979 2.5945e-02 weaklyHypometh 1.00000 0.786213 insignificant 0.85845814 1.4238e-02 weaklyHypometh 1.00000 0.824966 insignificant -0.06984975 0.04971308 weaklyHypometh 1.00000 insignificant 0.2966426 0.3884965 -0.10707053 10 0.304905 0.4607122 -0.1558074 3.8293e-01 1.0965e-13 weaklyHypometh 1.0000e+00 2.7413e-11 weaklyHypometh 4.1902e-01 4.2485e-05 weaklyHypometh 1.0000e+00 1.0621e-02 weaklyHypometh -0.1775250 5.6647e-03 weaklyHypometh 6.3649e-02 weaklyHypometh 0.2966426 0.5216837 -0.17546027 10 0.3049048 0.4744395 -0.16953471 9.9988e-01 7.5626e-11 weaklyHypometh 1.0000e+00 4.6909e-08 weaklyHypometh 9.8413e-01 1.0260e-05 weaklyHypometh 1.0000e+00 0.00256504 weaklyHypometh -0.1346287 6.4763e-03 weaklyHypometh 1.6279e-01 insignificant 0.3390327 0.3884965 -0.0671489 11 0.335682 0.4607122 -0.12503037 1.0733e-01 8.7407e-10 weaklyHypometh 5.0389e-01 2.1852e-07 weaklyHypometh 2.6854e-01 1.7464e-03 weaklyHypometh 1.0000e+00 0.3492748 insignificant -0.10767528 5.5727e-02 insignificant 4.4227e-01 insignificant 0.3390327 0.5216837 -1.2211e-01 11 0.3356818 0.4744395 -1.3876e-01 9.7417e-01 3.6769e-08 weaklyHypometh 1.0000e+00 1.2256e-05 weaklyHypometh 9.8051e-01 3.4342e-03 weaklyHypometh 1.0000e+00 6.4145e-01 insignificant -0.06477896 1.3191e-01 insignificant 1.0000e+00 insignificant 0.3884965 0.5216837 -1.4773e-02 11 0.4607122 0.4744395 -0.01372728 4.9213e-01 1.7205e-01 insignificant 1.0000e+00 8.4770e-01 insignificant 3.0785e-01 5.8803e-01 insignificant 1.0000000 1.0000e+00 insignificant 4.2896e-02 4.3163e-01 insignificant 1.0000e+00 insignificant chr19 3660150 3661150 52840 PIP5K1C ENSG00000186111 0.877302 323 13 0.777380 458 12 0.751165 366 13 0.8921437 273 9 0.8793712 251 12 0.833237 410 11 0.7475828 426 12 0.8651988 262 12 0.9089324 245 10 0.845556 229 11 0.819645 466 12 0.8496274 168 8 0.88295779 299 12 0.715362 118 8 0.8028500 293 12 0.5713428 156 6 0.9179634 172 6 0.7636593 259 12 0.8485249 415 12 0.828588 363 11 0.905495 165 9 0.780000 21 1 0.856374 251 13 0.9250361 159 9 0.971429 40 2 0.8700412 390 13 0.819066 147 11 0.888568 118 8 0.837974 354 12 0.821323 405 12 0.8678332 437 12 0.7524040 325 12 0.6264601 347 12 0.6935801 311 11 0.7879450 283 11 0.7500000 16 1 0.6999302 270 12 0.6471116 347 12 0.707344 300 9 0.8008423 358 12 0.8528179 248 9 0.7869996 249 11 0.8654881 273 12 0.910804 0.8336578 0.827833 0.8935259 0.872438 0.898239 0.8222582 0.9003887 0.907634 0.863743 0.9007432 0.885087 0.9095434 0.9245659 0.9024194 0.6882524 0.8435667 0.8564746 0.9094132 0.921989 0.923023 0.6738835 0.866645 0.9431933 0.9407642 0.8975552 0.866048 0.913197 0.852845 0.9041291 0.9023399 0.8845488 0.7424457 0.6324398 0.7736585 8.2604e-01 0.77103990 0.7225565 0.827887 0.8231158 0.889912 0.8303446 0.8295378 3 0.8780693 0.9024911 -0.02050238 12 0.814788 0.778444 0.03634335 0.98643546 1.1371e-01 insignificant 1.00000 1.000000 insignificant 0.97791555 1.6098e-01 insignificant 1.00000 1.000000 insignificant -0.03904247 0.13526325 insignificant 1.00000 insignificant 0.8780077 0.7445997 0.13732473 12 0.802440 0.6597898 0.1426503 3.4712e-18 1.0000e+00 weaklyHypermeth 6.0898e-17 1.0000e+00 weaklyHypermeth 3.8772e-07 1.0000e+00 weaklyHypermeth 6.6847e-06 1.0000e+00 weaklyHypermeth 0.1180817 2.7677e-03 weaklyHypermeth 3.3345e-02 weaklyHypermeth 0.8780693 0.8571429 0.01621249 9 0.8147876 0.7845073 0.03028033 4.6673e-03 6.9876e-01 weaklyHypermeth 6.4823e-02 1.0000e+00 weaklyHypermeth 4.4360e-01 7.4952e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0162212 6.4150e-01 insignificant 1.0000e+00 insignificant 0.9028124 0.7445997 0.1474324 12 0.830341 0.6597898 0.17055075 1.1695e-14 1.0000e+00 weaklyHypermeth 1.9821e-13 1.0000e+00 weaklyHypermeth 2.9756e-07 1.0000e+00 weaklyHypermeth 5.7223e-06 1.0000000 weaklyHypermeth 0.15712416 4.0460e-04 weaklyHypermeth 6.6548e-03 weaklyHypermeth 0.9028124 0.8577435 3.3959e-02 9 0.8303406 0.8368078 -6.4672e-03 6.5773e-03 9.7199e-01 weaklyHypermeth 9.8169e-02 1.0000e+00 weaklyHypermeth 1.4318e-01 9.9399e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.05526367 1.3782e-01 insignificant 1.0000e+00 insignificant 0.7445997 0.8577435 -1.0647e-01 9 0.6597898 0.8368078 -0.17701798 1.0000e+00 9.7163e-05 weaklyHypometh 1.0000e+00 1.0796e-03 weaklyHypometh 1.0000e+00 1.5386e-03 weaklyHypometh 1.0000000 2.0514e-02 weaklyHypometh -1.0186e-01 2.4905e-02 weaklyHypometh 2.4555e-01 insignificant chr19 3662050 3663050 52841 PIP5K1C ENSG00000186111 0.781119 282 12 0.587395 167 11 0.659354 97 8 0.8555987 267 11 0.6832143 93 8 0.814050 286 12 0.5211506 120 8 0.7879234 233 13 0.6719231 99 8 0.873869 107 11 0.825858 352 13 0.6506410 39 1 0.81079787 212 13 0.748148 41 5 0.7550875 93 8 0.5451389 40 1 0.8333333 19 1 0.7657302 297 14 0.7913214 180 12 0.688616 187 8 0.559707 80 8 0.784449 90 8 0.764767 147 11 0.8492828 94 9 0.932407 89 7 0.8345241 323 13 0.723183 115 7 0.666667 22 2 0.868524 176 13 0.778828 319 13 0.8077202 257 13 0.7426937 313 13 0.6708359 126 8 0.7330674 158 12 0.7558533 159 8 0.5256410 28 1 0.6876537 141 11 0.7336206 265 13 0.697435 198 9 0.7774412 307 12 0.8308082 266 11 0.6039576 108 7 0.8136485 293 12 0.855794 0.6757173 0.756571 0.8371662 0.759267 0.802461 0.7971703 0.7990978 0.711971 0.834053 0.8312651 0.742708 0.8277453 0.8244860 0.8289947 0.8222597 0.8595149 0.8021016 0.8113010 0.811498 0.693881 0.8315422 0.839181 0.8607323 0.9238121 0.7983990 0.825743 0.864415 0.853364 0.8329911 0.8027444 0.8074507 0.7048195 0.7319134 0.7841498 8.1067e-01 0.67168350 0.7644936 0.844220 0.8828291 0.877565 0.7602464 0.8355499 1 0.7888508 0.7965432 -0.00609692 12 0.741372 0.742906 -0.00153382 0.96523967 5.0084e-01 insignificant 1.00000 1.000000 insignificant 0.98138524 5.1742e-01 insignificant 1.00000 1.000000 insignificant -0.04354915 0.24279905 insignificant 1.00000 insignificant 0.7896218 0.7354618 0.05530748 12 0.814216 0.7774373 0.0367783 1.5446e-02 9.7083e-01 weaklyHypermeth 8.0622e-02 1.0000e+00 weaklyHypermeth 2.8985e-01 9.9663e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0480682 2.7082e-01 insignificant 1.0000e+00 insignificant 0.7892111 0.8361775 -0.02982485 9 0.7839676 0.7526073 0.03136030 6.6126e-01 3.6667e-02 weaklyHypometh 1.0000e+00 7.1896e-01 insignificant 7.2888e-01 1.7167e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0121447 8.0724e-01 insignificant 1.0000e+00 insignificant 0.7960298 0.7354618 0.0594782 13 0.741133 0.7774373 -0.03630447 2.9256e-03 9.8878e-01 weaklyHypermeth 2.0039e-02 1.0000e+00 weaklyHypermeth 6.9658e-02 9.9297e-01 insignificant 4.0265e-01 1.0000000 insignificant 0.09161730 6.2379e-02 insignificant 4.6023e-01 insignificant 0.7957362 0.8361775 -1.9918e-02 9 0.6975368 0.7526073 -5.5070e-02 8.4905e-01 4.3376e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.0165e-01 6.2437e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03140449 5.5272e-01 insignificant 1.0000e+00 insignificant 0.7351598 0.8353345 -8.7456e-02 9 0.7625998 0.7196216 0.04297821 8.7191e-01 9.2840e-04 weaklyHypometh 1.0000e+00 9.0136e-03 weaklyHypometh 8.8471e-01 8.8744e-02 insignificant 1.0000000 5.5120e-01 insignificant -6.0213e-02 2.9835e-01 insignificant 1.0000e+00 insignificant chr19 3671150 3672150 52842 PIP5K1C ENSG00000186111 0.788173 241 10 0.794418 161 7 0.701114 211 7 0.8276877 209 10 0.7469295 76 7 0.740953 315 10 0.7616639 135 7 0.8165455 131 7 0.8349443 136 7 0.816525 134 7 0.841704 293 7 0.7552656 76 6 0.77966791 225 7 0.251838 37 2 0.7888068 139 7 0.7740385 48 6 0.9145503 541 6 0.5874644 191 9 0.7382175 280 7 0.812960 314 10 0.756425 141 7 0.712813 108 7 0.622119 154 7 0.6460652 184 7 0.731457 48 5 0.7578623 177 10 0.664669 187 7 0.702020 129 6 0.769081 182 7 0.747683 242 10 0.6783435 208 10 0.7202351 325 10 0.6379459 193 7 0.3966117 142 7 0.5099238 300 5 0.6461754 243 10 0.5040111 209 6 0.7211616 260 10 0.869598 250 10 0.8451544 330 10 0.7769086 193 10 0.7880556 213 10 0.8064649 238 10 0.759875 0.8093636 0.694453 0.8214152 0.773678 0.784498 0.7815177 0.8419567 0.837151 0.844435 0.8471190 0.710186 0.7721212 0.8084206 0.8010873 0.7020489 0.8393578 0.7090322 0.7073504 0.778964 0.764843 0.6778577 0.674440 0.7150302 0.7366237 0.7112548 0.668182 0.716472 0.784266 0.7519363 0.7779443 0.8445999 0.6247617 0.4566196 0.5654694 5.4508e-01 0.46139742 0.6861192 0.885244 0.8066622 0.767904 0.7223322 0.7361642 5 0.8046775 0.7294964 0.04670141 7 0.694807 0.655236 0.03957043 0.00712136 8.8501e-01 weaklyHypermeth 0.71214 1.000000 insignificant 0.06707493 8.6087e-01 insignificant 1.00000 1.000000 insignificant 0.04460897 0.18960906 insignificant 1.00000 insignificant 0.8054625 0.5048255 0.25028961 10 0.753052 0.5431349 0.2099175 1.3463e-16 1.0000e+00 hypermethylated 2.1714e-15 1.0000e+00 hypermethylated 2.3360e-05 9.9992e-01 hypermethylated 2.7810e-04 1.0000e+00 hypermethylated 0.1843685 1.0250e-02 weaklyHypermeth 1.0148e-01 insignificant 0.8056701 0.8284314 0.00537747 10 0.8283576 0.8166621 0.01169543 4.3893e-01 5.4474e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.6314e-01 2.9645e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0635628 8.1653e-02 insignificant 8.4178e-01 insignificant 0.7312925 0.5052006 0.2066017 7 0.745045 0.5974483 0.14759655 1.7717e-09 9.7467e-01 hypermethylated 2.1606e-08 1.0000e+00 hypermethylated 7.2226e-04 9.6785e-01 hypermethylated 7.1511e-03 1.0000000 hypermethylated 0.13975954 3.4003e-02 weaklyHypermeth 3.0633e-01 insignificant 0.7312925 0.8284314 -4.2613e-02 7 0.7450449 0.8166621 -7.1617e-02 9.9790e-01 7.1166e-03 weaklyHypometh 1.0000e+00 3.5583e-01 insignificant 9.9893e-01 1.0247e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.10817179 8.3889e-04 weaklyHypometh 9.6870e-02 weaklyHypometh 0.5052006 0.8284314 -2.2910e-01 10 0.5974483 0.8166621 -0.21921380 1.0000e+00 3.5768e-08 hypomethylated 1.0000e+00 6.8784e-07 hypomethylated 9.9994e-01 6.2858e-05 hypomethylated 1.0000000 1.3302e-03 hypomethylated -2.4793e-01 2.7333e-03 weaklyHypometh 4.7126e-02 weaklyHypometh chr19 3779450 3780450 52843 MATK ENSG00000007264 0.928286 241 9 0.834297 423 10 0.653219 335 10 0.8985918 290 7 0.7250000 38 3 0.812122 426 9 0.7855442 73 6 0.8757416 160 7 0.9326359 108 7 0.920223 69 5 0.808128 407 7 0.8229167 20 1 0.94007221 198 7 0.948980 96 7 0.8681200 73 7 0.6666667 17 2 0.6666667 3 0 0.7302410 285 9 0.9571085 266 7 0.919568 272 7 0.628472 73 7 0.916306 120 7 0.843214 153 8 0.8283046 157 7 0.850080 54 4 0.9134515 441 10 0.895384 110 7 0.875000 41 3 0.819764 295 7 0.902296 460 10 0.9301506 428 10 0.9607623 282 9 0.5628139 347 8 0.6382728 93 7 0.5284205 363 8 0.6923077 72 4 0.6693697 168 7 0.7214802 419 10 0.859162 204 7 0.8498023 252 9 0.9479762 212 9 0.9126720 158 7 0.9344622 147 7 0.901179 0.8153977 0.620176 0.9215415 0.807042 0.935672 0.8179829 0.8926840 0.905593 0.910829 0.9209937 0.796948 0.9183146 0.9245473 0.8687809 0.8842366 0.8260970 0.8239715 0.9665202 0.928773 0.777973 0.9226846 0.864888 0.9490853 0.7739030 0.8927450 0.902158 1.000000 0.942792 0.8890455 0.9355351 0.9419278 0.6121706 0.7050571 0.5281169 6.2696e-01 0.78221083 0.7797563 0.913250 0.8783777 0.912492 0.8599246 0.9273186 3 0.8731579 0.9153905 -0.04082979 9 0.789909 0.828777 -0.03886844 0.57461728 4.0423e-04 weaklyHypometh 1.00000 0.090305 weaklyHypometh 0.85074960 2.2097e-01 insignificant 1.00000 1.000000 insignificant -0.02889241 0.39686673 insignificant 1.00000 insignificant 0.8731579 0.6840302 0.17551259 9 0.789909 0.6344984 0.1554101 2.4521e-10 1.0000e+00 weaklyHypermeth 2.7865e-09 1.0000e+00 weaklyHypermeth 1.7578e-06 1.0000e+00 weaklyHypermeth 2.6236e-05 1.0000e+00 weaklyHypermeth 0.1992622 2.9006e-04 weaklyHypermeth 5.1797e-03 weaklyHypermeth 0.8731579 0.8982528 -0.01772035 7 0.7899086 0.8220484 -0.03213987 8.7994e-01 2.5102e-02 weaklyHypometh 1.0000e+00 5.3699e-01 insignificant 8.9576e-01 2.3240e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0661087 4.3364e-02 weaklyHypometh 5.6317e-01 insignificant 0.9150727 0.6826265 0.2271273 9 0.801379 0.5816236 0.21975535 3.0766e-13 1.0000e+00 hypermethylated 4.8835e-12 1.0000e+00 hypermethylated 2.4121e-07 1.0000e+00 hypermethylated 4.7568e-06 1.0000000 hypermethylated 0.22815461 1.0947e-04 hypermethylated 2.3291e-03 hypermethylated 0.9153905 0.8982528 1.2836e-02 7 0.8287770 0.8220484 6.7286e-03 1.7263e-01 7.9571e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.5428e-01 4.4776e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03721628 2.5989e-01 insignificant 1.0000e+00 insignificant 0.6840302 0.8982528 -1.8935e-01 7 0.6344984 0.8220484 -0.18754999 1.0000e+00 9.4657e-07 weaklyHypometh 1.0000e+00 1.4563e-05 weaklyHypometh 1.0000e+00 1.1285e-05 weaklyHypometh 1.0000000 2.8212e-04 weaklyHypometh -2.6537e-01 7.7165e-05 hypomethylated 3.8984e-03 hypomethylated chr19 4003150 4004150 52845 ENSG00000188205 0.924498 247 14 0.768164 543 16 0.729558 403 16 0.9164742 177 13 0.6377082 277 12 0.828034 431 16 0.7198043 483 13 0.8957802 357 13 0.7186474 338 13 0.835434 367 13 0.869891 517 16 0.8581636 311 13 0.72503044 401 13 0.765332 100 6 0.7576010 365 13 0.7548151 332 11 0.7472956 201 7 0.6838600 203 11 0.8490210 563 17 0.848511 337 13 0.841241 217 11 0.857743 123 6 0.776006 365 14 0.7844789 223 14 0.715464 228 9 0.8396075 583 17 0.765051 258 11 0.681518 142 10 0.887759 515 16 0.879358 680 17 0.8324715 669 17 0.8687960 451 17 0.2112723 576 16 0.2619954 411 13 0.1143943 514 10 0.6996308 155 10 0.3464578 274 14 0.7304214 688 17 0.834369 277 13 0.9303514 303 11 0.8232275 103 8 0.8721984 232 8 0.9106209 177 12 0.907253 0.8051323 0.761183 0.8608895 0.817182 0.874007 0.8521728 0.8345713 0.811360 0.911733 0.8983970 0.870476 0.7887502 0.8510495 0.7994789 0.7742347 0.7933329 0.7688524 0.8317289 0.840411 0.827248 0.7597000 0.877303 0.8427831 0.8129415 0.8816545 0.752189 0.846170 0.858659 0.9019204 0.7891982 0.8820893 0.1128076 0.1042644 0.0972049 7.9419e-01 0.17721189 0.7207786 0.884837 0.8557623 0.876926 0.8347370 0.8511198 5 0.8545951 0.8630445 -0.01300874 16 0.722364 0.763293 -0.04092922 0.93958483 3.6066e-02 weaklyHypometh 1.00000 0.912297 insignificant 0.94267669 2.3359e-01 insignificant 1.00000 1.000000 insignificant -0.01910995 0.47386258 insignificant 1.00000 insignificant 0.8547993 0.3194498 0.52862447 16 0.727207 0.4316896 0.2955173 3.4799e-70 9.9804e-01 hypermethylated 1.9333e-68 1.0000e+00 hypermethylated 6.3004e-16 9.9988e-01 hypermethylated 2.1001e-14 1.0000e+00 hypermethylated 0.3976525 1.2720e-02 weaklyHypermeth 1.2114e-01 insignificant 0.8570191 0.8479853 -0.00242394 9 0.7937284 0.7591896 0.03453880 8.5765e-01 1.2686e-03 weaklyHypometh 1.0000e+00 7.4624e-02 weaklyHypometh 9.9909e-01 3.9867e-03 weaklyHypometh 1.0000e+00 0.20982486 insignificant -0.0824723 1.2284e-02 weaklyHypometh 2.5591e-01 insignificant 0.8637590 0.3194498 0.5600722 16 0.807927 0.4316896 0.37623750 9.7089e-55 1.0000e+00 hypermethylated 6.0680e-53 1.0000e+00 hypermethylated 9.4246e-15 1.0000e+00 hypermethylated 3.6248e-13 1.0000000 hypermethylated 0.41676243 1.0462e-02 weaklyHypermeth 1.1249e-01 insignificant 0.8667722 0.8479853 1.4830e-02 9 0.7993542 0.7591896 4.0165e-02 2.0944e-01 1.1319e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7471e-01 5.2720e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.06336231 4.6969e-02 weaklyHypometh 8.2926e-01 insignificant 0.3203846 0.8487626 -5.5933e-01 9 0.3997646 0.7991470 -0.39938240 1.0000e+00 1.4196e-24 hypomethylated 1.0000e+00 7.4716e-23 hypomethylated 1.0000e+00 3.2932e-11 hypomethylated 1.0000000 2.1955e-09 hypomethylated -4.8012e-01 5.6816e-03 weaklyHypometh 8.3552e-02 weaklyHypometh chr19 4009650 4010650 52846 ENSG00000188205 0.893200 436 12 0.737584 280 13 0.693870 342 12 0.8444836 416 13 0.7747437 187 13 0.736590 519 13 0.7207705 340 13 0.8264666 262 13 0.8009914 369 12 0.833316 359 12 0.864701 347 14 0.7457602 206 12 0.73632204 361 12 0.771645 132 7 0.8841391 315 13 0.6627840 172 11 0.7319701 194 10 0.7405883 411 12 0.7522923 287 12 0.725886 389 13 0.767408 169 12 0.734039 265 12 0.729726 397 13 0.6361379 211 12 0.797713 211 12 0.8456581 316 13 0.674695 350 14 0.790314 201 12 0.754615 237 11 0.764501 332 14 0.8402793 318 14 0.8173946 526 13 0.1207741 370 13 0.1055004 345 13 0.1148712 293 9 0.2859753 211 12 0.1228887 266 14 0.2480363 394 14 0.701220 327 12 0.7915126 477 13 0.8394731 306 12 0.6659027 317 11 0.7356880 377 12 0.882394 0.7423479 0.682068 0.9004105 0.784533 0.885203 0.8725713 0.8385244 0.836708 0.911262 0.8710834 0.832511 0.8286098 0.8072971 0.8521773 0.6797241 0.7688052 0.7608789 0.7959401 0.884893 0.725543 0.7358236 0.861830 0.8325689 0.8638514 0.8437463 0.825122 0.859491 0.762772 0.8690645 0.8338448 0.8494036 0.0965409 0.1006738 0.0420102 2.3906e-01 0.11602568 0.1883728 0.730241 0.7698420 0.825847 0.7610213 0.7499668 10 0.8223663 0.8215803 0.00027040 12 0.680863 0.637537 0.04332529 0.93956130 8.2871e-01 insignificant 1.00000 1.000000 insignificant 0.69552289 8.5764e-01 insignificant 1.00000 1.000000 insignificant 0.01119848 0.63364105 insignificant 1.00000 insignificant 0.8227287 0.1554018 0.69395836 12 0.746024 0.1652990 0.5807252 1.4923e-124 9.9579e-01 hypermethylated 2.9847e-122 1.0000e+00 hypermethylated 5.7342e-33 1.0000e+00 hypermethylated 1.9114e-30 1.0000e+00 hypermethylated 0.6075642 4.7346e-07 hypermethylated 1.5516e-05 hypermethylated 0.8237159 0.7671840 0.06571499 11 0.7690925 0.7335944 0.03549811 2.0678e-06 8.9407e-01 weaklyHypermeth 6.8928e-05 1.0000e+00 weaklyHypermeth 5.9896e-04 9.3279e-01 weaklyHypermeth 1.7113e-02 1.00000000 weaklyHypermeth 0.0271460 4.5914e-01 insignificant 1.0000e+00 insignificant 0.8222285 0.1554018 0.6814731 13 0.725825 0.1652990 0.56052642 1.6500e-90 9.9990e-01 hypermethylated 2.7499e-88 1.0000e+00 hypermethylated 4.7062e-27 1.0000e+00 hypermethylated 1.1766e-24 1.0000000 hypermethylated 0.59636573 1.5219e-07 hypermethylated 7.6096e-06 hypermethylated 0.8236297 0.7671840 6.2498e-02 12 0.7742138 0.7335944 4.0619e-02 6.2651e-06 9.2724e-01 weaklyHypermeth 2.0884e-04 1.0000e+00 weaklyHypermeth 1.2848e-04 9.0481e-01 weaklyHypermeth 5.1393e-03 1.0000e+00 weaklyHypermeth 0.01594754 6.7146e-01 insignificant 1.0000e+00 insignificant 0.1554126 0.7674806 -6.3837e-01 12 0.1730401 0.7502797 -0.57723957 1.0000e+00 1.1342e-44 hypomethylated 1.0000e+00 1.6203e-42 hypomethylated 1.0000e+00 7.4081e-17 hypomethylated 1.0000000 1.4816e-14 hypomethylated -5.8042e-01 4.2359e-07 hypomethylated 6.7819e-05 hypomethylated chr19 4096350 4097350 52847 MAP2K2 ENSG00000126934 0.522216 139 6 0.349170 335 6 0.370989 210 6 0.5052364 202 6 0.6872400 159 5 0.667216 224 7 0.3948667 166 6 0.8024802 163 6 0.6633787 137 5 0.544516 116 5 0.643920 256 6 0.5900000 78 4 0.19845616 170 5 0.460586 143 5 0.4404545 202 5 0.5942857 94 5 0.9687500 17 1 0.4959953 228 6 0.5683291 219 6 0.579582 181 8 0.817659 79 7 0.351370 104 5 0.420286 91 5 0.5200240 148 5 0.549452 132 5 0.5805661 277 6 0.379857 178 5 0.548379 135 4 0.465315 125 6 0.455648 318 6 0.4774206 236 6 0.6464808 240 6 0.3143678 226 5 0.2698864 109 5 0.4689871 408 6 0.6096799 111 2 0.3245784 268 6 0.2506497 291 6 0.357285 141 6 0.3760761 101 6 0.3413710 98 6 0.5101126 102 6 0.5448840 154 6 0.751169 0.5464357 0.468664 0.6506419 0.794343 0.752245 0.5944099 0.6976389 0.625856 0.815060 0.6822528 0.548584 0.2459142 0.6348858 0.5535367 0.6144668 NA 0.4086890 0.6204231 0.656452 0.901522 0.3816988 0.706469 0.6869451 0.6011752 0.6331761 0.615154 0.868765 0.540644 0.4430043 0.5442350 0.8228161 0.2603185 0.1431507 0.1878528 5.6853e-01 0.18980248 0.1138305 0.456297 0.4321831 0.263557 0.5370819 0.5828217 4 0.6010468 0.6097916 -0.01118693 6 0.478154 0.496228 -0.01807414 0.58804954 6.2601e-01 insignificant 1.00000 1.000000 insignificant 0.63520735 6.7527e-01 insignificant 1.00000 1.000000 insignificant 0.03467872 0.51532237 insignificant 1.00000 insignificant 0.6010468 0.2117564 0.39248019 6 0.478154 0.3856835 0.0924707 7.0893e-16 7.2450e-01 hypermethylated 1.1253e-14 1.0000e+00 hypermethylated 1.2637e-05 8.7751e-01 hypermethylated 1.5996e-04 1.0000e+00 hypermethylated 0.1793586 2.5336e-02 weaklyHypermeth 2.2422e-01 insignificant 0.6010468 0.4848993 0.10959543 6 0.4781542 0.3768109 0.10134330 2.9254e-03 9.6807e-01 weaklyHypermeth 4.3663e-02 1.0000e+00 weaklyHypermeth 6.8364e-03 9.9695e-01 weaklyHypermeth 1.3147e-01 1.00000000 insignificant 0.1264377 4.6470e-02 weaklyHypermeth 5.8823e-01 insignificant 0.6097916 0.2117564 0.3983897 6 0.496228 0.3856835 0.11054487 7.3415e-12 8.7522e-01 hypermethylated 1.1123e-10 1.0000e+00 hypermethylated 4.1014e-05 8.1907e-01 hypermethylated 5.4479e-04 1.0000000 hypermethylated 0.14467983 5.9830e-02 insignificant 4.4985e-01 insignificant 0.6097916 0.4848993 1.1779e-01 6 0.4962284 0.3768109 1.1942e-01 1.2099e-02 8.8856e-01 weaklyHypermeth 1.5511e-01 1.0000e+00 insignificant 3.0692e-02 9.7261e-01 weaklyHypermeth 4.5136e-01 1.0000e+00 insignificant 0.09175903 1.3083e-01 insignificant 1.0000e+00 insignificant 0.2117564 0.4848993 -2.5713e-01 6 0.3856835 0.3768109 0.00887257 9.5366e-01 9.5027e-05 hypomethylated 1.0000e+00 1.0677e-03 hypomethylated 9.5564e-01 1.5311e-01 insignificant 1.0000000 8.8502e-01 insignificant -5.2921e-02 4.7389e-01 insignificant 1.0000e+00 insignificant chr19 4324150 4325150 52849 MPND ENSG00000008382 0.916730 367 16 0.954383 342 14 0.873028 514 16 0.9508995 475 16 0.8709261 303 14 0.891909 624 16 0.8847980 382 14 0.9032344 520 16 0.9238580 370 16 0.889808 411 15 0.895179 549 16 0.9268618 230 12 0.96464629 420 16 0.925424 303 16 0.8932970 557 15 0.8975087 248 9 0.7986111 50 2 0.8704707 453 16 0.9004943 631 16 0.922969 497 15 0.876075 248 14 0.862958 278 15 0.895173 481 16 0.7300261 293 13 0.918591 293 16 0.9494859 631 16 0.814705 555 15 0.849994 303 15 0.882635 505 16 0.955734 608 16 0.9210770 512 16 0.8330958 563 16 0.2633660 474 16 0.2221112 415 16 0.3456919 372 14 0.2976190 183 6 0.2943896 580 16 0.2687119 708 16 0.863936 379 15 0.9265845 399 16 0.9320341 303 15 0.8708654 298 16 0.8692681 326 16 0.916016 0.9446860 0.865867 0.9324430 0.921794 0.944901 0.9080634 0.9171670 0.919629 0.931218 0.9132335 0.946022 0.9527052 0.9067422 0.9131751 0.8757096 0.7639105 0.9282600 0.9174437 0.908031 0.916668 0.8628468 0.917782 0.8259529 0.9243974 0.9332547 0.869233 0.883799 0.882158 0.9389968 0.9277300 0.9275927 0.1932797 0.1650809 0.2537990 1.9280e-01 0.22342718 0.1999961 0.870930 0.9125810 0.934116 0.9189265 0.9265234 11 0.9177783 0.9081924 0.00972665 16 0.864378 0.854562 0.00981637 0.15403232 9.0437e-01 insignificant 1.00000 1.000000 insignificant 0.17600054 9.1669e-01 insignificant 1.00000 1.000000 insignificant 0.02862264 0.17140299 insignificant 1.00000 insignificant 0.9177783 0.1848463 0.70631164 16 0.864378 0.2709223 0.5934561 1.2605e-183 1.0000e+00 hypermethylated 4.2018e-181 1.0000e+00 hypermethylated 1.9992e-29 1.0000e+00 hypermethylated 4.9374e-27 1.0000e+00 hypermethylated 0.6207702 2.0354e-09 hypermethylated 1.0177e-07 hypermethylated 0.9180010 0.9049853 0.00932993 16 0.9184020 0.8887434 0.02965866 1.7226e-04 4.3371e-01 weaklyHypermeth 3.6651e-03 1.0000e+00 weaklyHypermeth 8.0452e-03 2.1062e-01 weaklyHypermeth 1.4366e-01 1.00000000 insignificant 0.0102142 5.7164e-01 insignificant 1.0000e+00 insignificant 0.9081924 0.1848463 0.6978911 16 0.854562 0.2709223 0.58363972 1.0797e-122 1.0000e+00 hypermethylated 2.6992e-120 1.0000e+00 hypermethylated 4.1080e-25 1.0000e+00 hypermethylated 5.1350e-23 1.0000000 hypermethylated 0.59214756 5.0318e-13 hypermethylated 1.2580e-10 hypermethylated 0.9088834 0.9049853 -8.3627e-04 16 0.9079721 0.8887434 1.9229e-02 7.2619e-02 2.9910e-01 insignificant 7.1195e-01 1.0000e+00 insignificant 2.5178e-01 2.4506e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01840846 4.4940e-01 insignificant 1.0000e+00 insignificant 0.1849817 0.9049853 -7.3109e-01 16 0.2878549 0.8887434 -0.60088843 1.0000e+00 6.6835e-70 hypomethylated 1.0000e+00 1.6709e-67 hypomethylated 1.0000e+00 8.9923e-17 hypomethylated 1.0000000 1.4987e-14 hypomethylated -6.1056e-01 6.4368e-10 hypomethylated 4.9538e-07 hypomethylated chr19 4332950 4333950 52851 MPND ENSG00000008382 0.801124 353 12 0.727723 256 12 0.716888 181 12 0.8230689 257 12 0.8257576 70 8 0.814116 437 12 0.7833720 150 8 0.7651641 230 12 0.7850305 133 11 0.864984 179 12 0.837855 392 12 0.7716117 113 8 0.77365412 157 11 0.928571 33 2 0.7861355 183 12 0.6980820 59 5 0.8992785 87 7 0.7814881 205 12 0.8017857 224 12 0.818284 357 12 0.758796 58 6 0.859137 94 8 0.816873 277 12 0.7916667 100 12 0.792749 140 12 0.8185462 238 12 0.913995 118 10 0.779167 55 3 0.778991 178 12 0.867452 217 12 0.8971499 237 12 0.7741412 498 12 0.7386553 169 12 0.7172022 171 12 0.6739683 238 12 0.8123016 97 7 0.8172288 109 12 0.8223960 252 12 0.873612 334 12 0.8741222 309 12 0.8474080 277 12 0.8165269 283 11 0.8676982 373 12 0.828294 0.7558693 0.737301 0.8414714 0.930921 0.824014 0.8047976 0.8283129 0.814927 0.880563 0.8376359 0.796013 0.8442403 0.8459883 0.7998107 0.7361372 0.8536962 0.8066801 0.8147008 0.830178 0.801590 0.8344559 0.819327 0.8130482 0.8083619 0.8377085 0.897310 0.775000 0.810728 0.8909551 0.8804221 0.7882575 0.7305838 0.7221800 0.7359732 7.8395e-01 0.82591635 0.8245831 0.867250 0.8819828 0.865656 0.8545475 0.8814790 5 0.8128698 0.8261657 -0.01505490 12 0.808633 0.834394 -0.02576126 0.97330808 1.4347e-01 insignificant 1.00000 1.000000 insignificant 0.98425819 1.7108e-01 insignificant 1.00000 1.000000 insignificant -0.02052325 0.30260563 insignificant 1.00000 insignificant 0.8127313 0.7729469 0.04434649 12 0.793913 0.7309908 0.0629219 9.1832e-05 9.4585e-01 weaklyHypermeth 6.8024e-04 1.0000e+00 weaklyHypermeth 9.0368e-03 9.4532e-01 weaklyHypermeth 6.5013e-02 1.0000e+00 weaklyHypermeth 0.0365733 2.3612e-01 insignificant 1.0000e+00 insignificant 0.8127313 0.8780952 -0.05318096 12 0.7939127 0.8677983 -0.07388561 1.0000e+00 5.5248e-04 weaklyHypometh 1.0000e+00 3.9463e-02 weaklyHypometh 1.0000e+00 1.0355e-03 weaklyHypometh 1.0000e+00 0.09413474 weaklyHypometh -0.0556748 4.2729e-03 weaklyHypometh 1.3353e-01 insignificant 0.8260870 0.7731660 0.0551322 12 0.834394 0.7502057 0.08418874 9.2585e-05 9.8741e-01 weaklyHypermeth 8.2665e-04 1.0000e+00 weaklyHypermeth 1.0642e-02 9.9792e-01 weaklyHypermeth 8.1237e-02 1.0000000 weaklyHypermeth 0.05709657 8.6999e-02 insignificant 6.0416e-01 insignificant 0.8260870 0.8781726 -4.0085e-02 12 0.8343945 0.8772413 -4.2847e-02 9.9994e-01 1.0051e-02 weaklyHypometh 1.0000e+00 4.3699e-01 insignificant 9.9866e-01 1.5483e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03515154 7.7629e-02 insignificant 9.5839e-01 insignificant 0.7731660 0.8781726 -9.4530e-02 12 0.7502057 0.8772413 -0.12703555 1.0000e+00 2.6950e-06 weaklyHypometh 1.0000e+00 3.7958e-05 weaklyHypometh 1.0000e+00 1.7435e-04 weaklyHypometh 1.0000000 3.0060e-03 weaklyHypometh -9.2248e-02 1.3460e-02 weaklyHypometh 1.6024e-01 insignificant chr19 4664250 4665250 52858 DPP9 ENSG00000142002 0.933356 898 22 0.862585 950 22 0.902203 811 23 0.9481419 1026 22 0.9081440 566 20 0.826608 1201 22 0.8459574 688 21 0.9033392 781 23 0.8916931 832 23 0.894214 765 23 0.885429 1011 23 0.8827609 513 21 0.94899709 833 23 0.927873 479 17 0.9123682 837 21 0.9119828 438 17 0.8168262 172 8 0.7385763 1408 20 0.9325731 971 23 0.953588 1031 22 0.758075 243 19 0.884402 440 19 0.871079 663 22 0.8791612 222 20 0.853751 379 19 0.8874355 1071 23 0.886436 463 20 0.885120 320 18 0.886388 857 23 0.905145 1165 23 0.9650119 994 23 0.9409841 1079 22 0.4297708 910 23 0.4498987 631 23 0.4541069 1005 19 0.4180556 177 11 0.4272811 543 21 0.3755737 1142 23 0.952543 874 22 0.9657929 962 22 0.9331666 771 22 0.9576736 1062 22 0.8878162 975 22 0.915398 0.8341879 0.886117 0.9531774 0.910601 0.930701 0.9064957 0.9489999 0.924379 0.946448 0.9043069 0.899445 0.9578828 0.9166959 0.8742877 0.8859956 0.8799820 0.6724178 0.9375379 0.945561 0.864564 0.9066682 0.893259 0.8615411 0.8953059 0.9245776 0.894668 0.899575 0.910120 0.9545542 0.9592896 0.9238416 0.3491650 0.3651732 0.4795781 3.6000e-01 0.38726061 0.3393806 0.957722 0.9582574 0.927616 0.9469841 0.9384838 15 0.9019741 0.9254053 -0.02324447 23 0.861801 0.800074 0.06172723 0.99744137 4.0662e-02 weaklyHypometh 1.00000 0.945617 insignificant 0.93460869 3.5510e-01 insignificant 1.00000 1.000000 insignificant 0.00777838 0.67910100 insignificant 1.00000 insignificant 0.9020491 0.3396869 0.51585255 23 0.877907 0.4097465 0.4681603 6.7003e-139 9.9991e-01 hypermethylated 1.6751e-136 1.0000e+00 hypermethylated 2.8898e-29 9.9767e-01 hypermethylated 4.9374e-27 1.0000e+00 hypermethylated 0.4655797 3.0525e-15 hypermethylated 6.1051e-13 hypermethylated 0.9022417 0.9487511 -0.04671239 22 0.8908008 0.9323280 -0.04152721 1.0000e+00 1.3582e-04 weaklyHypometh 1.0000e+00 1.3582e-02 weaklyHypometh 9.9966e-01 1.2313e-03 weaklyHypometh 1.0000e+00 0.09471902 weaklyHypometh -0.0480378 2.4139e-02 weaklyHypometh 3.5099e-01 insignificant 0.9258555 0.3398411 0.5377426 23 0.888086 0.4261363 0.46194980 3.9666e-140 1.0000e+00 hypermethylated 1.3222e-137 1.0000e+00 hypermethylated 7.1474e-25 9.9997e-01 hypermethylated 7.9415e-23 1.0000000 hypermethylated 0.45780128 6.1161e-14 hypermethylated 3.0580e-11 hypermethylated 0.9260621 0.9487511 -2.0211e-02 22 0.8680861 0.9323280 -6.4242e-02 9.9730e-01 2.4472e-02 weaklyHypometh 1.0000e+00 7.8942e-01 insignificant 9.8980e-01 2.9276e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.05581615 1.6439e-02 weaklyHypometh 4.8861e-01 insignificant 0.3411684 0.9487400 -5.9004e-01 22 0.4402688 0.9295084 -0.48923956 1.0000e+00 2.3662e-92 hypomethylated 1.0000e+00 7.8872e-90 hypomethylated 1.0000e+00 3.1206e-17 hypomethylated 1.0000000 7.8016e-15 hypomethylated -5.1362e-01 1.6430e-09 hypomethylated 5.4767e-07 hypomethylated chr19 4877750 4878750 52862 UHRF1 ENSG00000034063 0.600064 275 9 0.495274 129 7 0.578946 67 6 0.6998966 206 6 0.6610133 117 6 0.623001 195 8 0.5181818 116 8 0.4122733 110 6 0.5271189 104 6 0.501526 128 7 0.602143 156 7 0.4283217 77 7 0.59820532 131 6 0.524769 101 6 0.5437253 102 6 0.4652015 43 3 0.8556158 296 3 0.5631939 288 8 0.6013049 69 6 0.649042 124 6 0.670966 57 5 0.811111 21 1 0.575321 187 6 0.6190476 46 3 0.946429 32 3 0.5271164 104 7 0.620170 84 6 0.544615 42 2 0.584005 113 6 0.493333 95 8 0.6551282 70 5 0.6506502 121 8 0.6189252 102 6 0.5290033 51 4 0.7614478 74 3 0.5000000 5 0 0.5954194 130 8 0.5657089 95 5 0.626084 218 6 0.6509212 247 10 0.6910442 307 6 0.6399468 239 6 0.6448990 262 9 0.761016 0.6417729 0.661403 0.7579890 0.708490 0.779438 0.6823296 0.6794263 0.680652 0.735352 0.7436931 0.568297 0.6968910 0.5821671 0.6908246 0.6472727 0.8289445 0.6646386 0.7107042 0.769450 0.705925 0.8153273 0.725897 0.6975645 0.9112141 0.7049255 0.716982 0.687023 0.670712 0.6167939 0.7075749 0.8370241 0.6776880 0.7345933 0.6549387 6.3972e-01 0.70059351 0.7665944 0.728725 0.7644419 0.751090 0.7379048 0.7035178 1 0.5733945 0.6471193 -0.02525337 6 0.615269 0.622793 -0.00752411 0.58448198 7.4074e-02 insignificant 1.00000 1.000000 insignificant 0.76896243 1.9186e-01 insignificant 1.00000 1.000000 insignificant -0.06905019 0.12372528 insignificant 1.00000 insignificant 0.5720369 0.6455142 -0.00309077 5 0.582397 0.5987173 -0.0163205 1.6745e-01 5.0386e-03 weaklyHypometh 7.2175e-01 2.8058e-01 insignificant 7.6728e-01 2.4959e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0226433 6.1834e-01 lowCoverage 1.0000e+00 lowCoverage 0.5733945 0.5412412 -0.02526508 6 0.6152687 0.6704242 -0.05515550 9.2380e-01 5.6540e-02 insignificant 1.0000e+00 8.4388e-01 insignificant 9.9046e-01 1.3136e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0781382 4.8136e-03 weaklyHypometh 1.4587e-01 insignificant 0.6473630 0.6455142 0.0131975 5 0.629369 0.5987173 0.03065212 2.7660e-01 5.2069e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.7625e-01 5.2927e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.04640694 3.9177e-01 lowCoverage 1.0000e+00 lowCoverage 0.6471193 0.5412412 -8.3548e-03 6 0.6227929 0.6704242 -4.7631e-02 2.4441e-01 3.0978e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.5450e-01 1.0538e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00908798 8.1529e-01 insignificant 1.0000e+00 insignificant 0.6455142 0.5309735 -3.1860e-02 5 0.5987173 0.6210505 -0.02233318 1.4810e-01 6.8608e-02 insignificant 1.0000e+00 3.8328e-01 insignificant 8.7011e-01 4.3832e-01 insignificant 1.0000000 1.0000e+00 insignificant -5.5495e-02 2.0801e-01 lowCoverage 1.0000e+00 lowCoverage chr19 4998550 4999550 52864 KDM4B ENSG00000127663 0.720086 1211 25 0.678398 783 24 0.666173 667 23 0.7199331 1554 25 0.6084697 434 22 0.743195 1447 25 0.6527024 679 22 0.5510779 685 23 0.6202811 833 21 0.726243 878 23 0.700276 783 24 0.5546611 585 21 0.70711760 837 23 0.548316 349 16 0.7525118 869 21 0.6153528 405 18 0.5550022 298 17 0.7118789 1807 24 0.5663767 867 23 0.659061 1041 24 0.572089 347 20 0.701648 532 21 0.755574 883 23 0.6050906 291 21 0.748992 435 22 0.7480063 1022 24 0.645444 765 22 0.607747 368 22 0.595628 795 23 0.596727 1022 24 0.7163956 1076 25 0.7678669 1348 25 0.5019454 812 23 0.4181980 895 23 0.5816993 332 14 0.6387681 244 18 0.4796646 462 22 0.5315761 1239 26 0.726100 1335 23 0.7462256 1259 24 0.7167736 1258 25 0.7273728 2021 25 0.7054533 1364 25 0.603548 0.5649982 0.570360 0.5942740 0.605867 0.614842 0.5765340 0.5762088 0.568817 0.607919 0.6017685 0.593412 0.5889614 0.6195460 0.6010419 0.5520499 0.5416033 0.5863384 0.5922817 0.613441 0.640052 0.6078272 0.605678 0.6098125 0.5987616 0.6124728 0.565611 0.599925 0.587672 0.6014964 0.5931667 0.6038832 0.4069300 0.3673414 0.4787135 5.6999e-01 0.42057868 0.5178740 0.600327 0.6024916 0.616014 0.6056934 0.5884007 21 0.6433990 0.6420045 -0.00967168 23 0.561710 0.554916 0.00679381 0.99999076 5.3461e-02 insignificant 1.00000 1.000000 insignificant 0.99998737 5.3503e-02 insignificant 1.00000 1.000000 insignificant -0.01891177 0.48665668 insignificant 1.00000 insignificant 0.6439082 0.5352926 0.17762226 23 0.616514 0.4473031 0.1692112 6.0598e-32 1.0000e+00 weaklyHypermeth 1.5538e-30 1.0000e+00 weaklyHypermeth 3.1415e-06 1.0000e+00 weaklyHypermeth 4.4246e-05 1.0000e+00 weaklyHypermeth 0.1275470 7.5180e-03 weaklyHypermeth 8.0769e-02 weaklyHypermeth 0.6448113 0.6672654 -0.01612130 23 0.7227709 0.7288390 -0.00606810 8.7256e-01 1.3560e-04 weaklyHypometh 1.0000e+00 1.3582e-02 weaklyHypometh 9.4056e-01 7.3381e-04 weaklyHypometh 1.0000e+00 0.07338074 weaklyHypometh -0.0715295 3.6780e-04 weaklyHypometh 5.2543e-02 weaklyHypometh 0.6425028 0.5355438 0.1762539 23 0.638994 0.4776061 0.16138802 4.3060e-21 1.0000e+00 weaklyHypermeth 9.5689e-20 1.0000e+00 weaklyHypermeth 1.7980e-08 1.0000e+00 weaklyHypermeth 4.2809e-07 1.0000000 weaklyHypermeth 0.14645880 3.5498e-03 weaklyHypermeth 4.4935e-02 weaklyHypermeth 0.6433171 0.6672195 -4.3831e-03 23 0.7071819 0.7191547 -1.1973e-02 3.4640e-01 2.2013e-02 weaklyHypometh 1.0000e+00 7.3900e-01 insignificant 5.3730e-01 1.5898e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.05261775 3.6904e-02 weaklyHypometh 7.6884e-01 insignificant 0.5363705 0.6672195 -1.9865e-01 23 0.5271786 0.7191547 -0.19197603 1.0000e+00 1.0761e-12 weaklyHypometh 1.0000e+00 2.9892e-11 weaklyHypometh 1.0000e+00 4.7515e-07 weaklyHypometh 1.0000000 1.4848e-05 weaklyHypometh -1.9908e-01 1.2249e-03 weaklyHypometh 2.9165e-02 weaklyHypometh chr19 5041250 5042250 52865 KDM4B ENSG00000127663 0.855225 410 11 0.719641 514 9 0.703809 488 9 0.7224177 299 11 0.5571208 750 6 0.895127 356 11 0.6962701 216 8 0.8375318 369 9 0.6839883 372 6 0.910704 401 9 0.812278 3069 9 0.5090371 399 6 0.78559400 401 9 0.781481 66 6 0.7742369 274 9 0.7508006 267 4 0.7371359 361 4 0.6538853 416 11 0.8737987 592 8 0.787260 251 9 0.785504 295 9 0.360181 104 5 0.816456 300 9 0.7221795 117 10 0.870977 263 2 0.8138477 527 11 0.798245 95 9 0.793871 67 5 0.771518 389 6 0.760729 426 10 0.7755252 403 9 0.8824820 495 11 0.1107563 402 9 0.1760822 470 9 0.1288345 906 8 0.0582180 391 8 0.2149062 409 8 0.0994239 600 11 0.172427 402 11 0.2087161 643 11 0.2187250 320 11 0.2683652 293 8 0.2647153 330 11 0.886316 0.7347700 0.698991 0.7338242 0.676148 0.877064 0.6901584 0.8078441 0.791207 0.835487 0.7486293 0.580121 0.7445079 0.7916946 0.7077287 0.6725924 0.6750797 0.6134482 0.7625738 0.771446 0.765782 0.3311468 0.675741 0.7505060 0.8094580 0.8098916 0.851931 0.807946 0.754107 0.6718578 0.8164387 0.9433243 0.1082688 0.1977993 0.0935292 9.8042e-02 0.27608896 0.0722393 0.131342 0.2347467 0.204555 0.3028431 0.2589900 5 0.5207441 0.7274296 -0.09750953 9 0.749157 0.843115 -0.09395766 0.99685254 1.8027e-02 weaklyHypometh 1.00000 0.682511 insignificant 0.99787066 3.4284e-01 insignificant 1.00000 1.000000 insignificant -0.01025920 0.82277174 insignificant 1.00000 insignificant 0.5206587 0.1002206 0.45992328 11 0.741351 0.1059797 0.6353714 1.1431e-74 1.0000e+00 hypermethylated 7.1441e-73 1.0000e+00 hypermethylated 5.2631e-25 1.0000e+00 hypermethylated 4.3859e-23 1.0000e+00 hypermethylated 0.6209969 1.9340e-12 hypermethylated 1.7582e-10 hypermethylated 0.5206587 0.2283702 0.44865156 11 0.7413512 0.2384059 0.50294521 1.8184e-62 1.0000e+00 hypermethylated 1.8184e-59 1.0000e+00 hypermethylated 5.6646e-23 1.0000e+00 hypermethylated 2.8323e-20 1.00000000 hypermethylated 0.5257775 7.4546e-13 hypermethylated 7.4546e-10 hypermethylated 0.7265918 0.1003776 0.6184680 9 0.771686 0.1546984 0.61698758 2.4732e-53 1.0000e+00 hypermethylated 1.4548e-51 1.0000e+00 hypermethylated 2.8327e-17 1.0000e+00 hypermethylated 1.6663e-15 1.0000000 hypermethylated 0.63125609 2.5103e-10 hypermethylated 2.7892e-08 hypermethylated 0.7266436 0.2283702 5.4235e-01 9 0.8003276 0.2384059 5.6192e-01 3.5667e-46 1.0000e+00 hypermethylated 3.5667e-43 1.0000e+00 hypermethylated 1.5843e-17 1.0000e+00 hypermethylated 9.2820e-15 1.0000e+00 hypermethylated 0.53603667 3.7581e-09 hypermethylated 3.7581e-06 hypermethylated 0.1002206 0.2283702 -9.8059e-02 11 0.1059797 0.2384059 -0.13242620 1.0000e+00 4.1259e-08 weaklyHypometh 1.0000e+00 7.7847e-07 weaklyHypometh 1.0000e+00 6.3623e-05 weaklyHypometh 1.0000000 1.3302e-03 weaklyHypometh -9.5219e-02 9.9996e-03 weaklyHypometh 1.3513e-01 insignificant chr19 5079650 5080650 52867 KDM4B ENSG00000127663 0.599944 332 5 0.534439 289 7 0.393282 227 6 0.5503341 255 5 0.5463140 85 5 0.742571 286 5 0.6378651 198 6 0.5331580 164 7 0.4977934 166 5 0.545948 149 5 0.731963 215 7 0.3566854 131 5 0.38553560 163 5 0.557292 23 1 0.5989107 196 5 0.6311615 95 4 0.2750431 172 4 0.5460381 277 5 0.5146383 176 5 0.417154 196 5 0.730900 121 6 0.195164 156 4 0.532847 182 8 0.4198018 105 5 0.524737 136 7 0.4741949 378 6 0.480357 63 5 0.820833 61 4 0.553721 226 5 0.428378 383 7 0.3036177 399 6 0.8410564 307 5 0.3077314 293 6 0.2012783 240 7 0.3333333 127 2 0.4179693 109 7 0.4159636 114 7 0.3310642 411 8 0.396599 303 5 0.5966725 391 5 0.5922450 231 5 0.1831743 399 5 0.4045162 361 5 0.626292 0.5500304 0.546415 0.5531109 0.599528 0.675548 0.6070611 0.5008071 0.496199 0.540382 0.6685847 0.501219 0.3291459 0.6175547 0.6437218 0.5792549 0.2835637 0.4922561 0.3875827 0.468560 0.781014 0.3381609 0.775304 0.5757154 0.6085446 0.5108455 0.453463 0.892100 0.540934 0.5028033 0.4208239 0.7673973 0.2512395 0.2204517 0.2061997 3.3387e-01 0.39105421 0.5317428 0.450335 0.4279790 0.472102 0.2723343 0.4882417 5 0.5375494 0.5718837 -0.03983530 5 0.540401 0.476374 0.06402714 0.36859717 1.4954e-01 insignificant 1.00000 1.000000 insignificant 0.54329809 1.4121e-01 insignificant 1.00000 1.000000 insignificant 0.00433619 0.94506236 insignificant 1.00000 insignificant 0.5375494 0.2951201 0.18000008 5 0.540401 0.3798222 0.1605792 4.8637e-11 9.9855e-01 weaklyHypermeth 5.9313e-10 1.0000e+00 weaklyHypermeth 1.5923e-05 9.6495e-01 weaklyHypermeth 1.9904e-04 1.0000e+00 weaklyHypermeth 0.1952468 5.3315e-04 weaklyHypermeth 8.7402e-03 weaklyHypermeth 0.5371202 0.4166172 0.12908924 5 0.5204516 0.4796699 0.04078165 4.2089e-06 4.8818e-01 weaklyHypermeth 1.2754e-04 1.0000e+00 weaklyHypermeth 4.6124e-04 8.9916e-01 weaklyHypermeth 1.4879e-02 1.00000000 weaklyHypermeth 0.0951622 2.9215e-01 insignificant 1.0000e+00 insignificant 0.5715421 0.2944359 0.2283066 6 0.468737 0.3418400 0.12689684 6.5770e-08 9.1592e-01 hypermethylated 7.5597e-07 1.0000e+00 hypermethylated 6.3954e-05 9.4298e-01 hypermethylated 7.9446e-04 1.0000000 hypermethylated 0.19091062 9.6269e-03 weaklyHypermeth 1.0579e-01 insignificant 0.5726257 0.4166172 1.7140e-01 5 0.5109210 0.4796699 3.1251e-02 2.9100e-05 4.2347e-01 weaklyHypermeth 8.0834e-04 1.0000e+00 weaklyHypermeth 5.8114e-03 9.2071e-01 weaklyHypermeth 1.2107e-01 1.0000e+00 insignificant 0.09082598 3.6380e-01 insignificant 1.0000e+00 insignificant 0.2940264 0.4166172 -4.8553e-02 5 0.3023000 0.4796699 -0.17736993 9.7211e-01 9.5976e-04 weaklyHypometh 1.0000e+00 9.2284e-03 weaklyHypometh 9.6852e-01 1.3445e-02 weaklyHypometh 1.0000000 1.2005e-01 insignificant -1.0008e-01 2.7802e-01 insignificant 1.0000e+00 insignificant chr19 5487450 5488450 52871 ZNRF4 ENSG00000105428 0.059192 1017 27 0.082630 1012 32 0.040950 1152 30 0.0418818 1069 23 0.0363040 578 30 0.084718 1168 29 0.0302753 1284 32 0.0342007 799 30 0.0398148 1108 32 0.061010 882 30 0.075158 1002 29 0.0530139 875 27 0.03471739 965 32 0.234375 61 4 0.0470425 1003 31 0.0650653 870 28 0.0187012 1062 27 0.0686142 1165 23 0.0517755 804 32 0.049971 1083 30 0.084915 296 26 0.075274 371 16 0.083047 747 29 0.0738893 540 25 0.071362 581 17 0.0532741 1324 32 0.032462 482 24 0.085919 258 21 0.068634 781 31 0.075583 1399 32 0.0523283 1220 32 0.0410017 1318 30 0.0499834 709 29 0.0598680 733 28 0.0979592 757 17 0.0052431 265 13 0.0549298 463 25 0.1217502 1186 31 0.039018 1231 32 0.0447857 1222 30 0.0272686 1118 23 0.0419748 1020 23 0.0865990 995 24 0.079656 0.0728212 0.053378 0.0546227 0.067556 0.111374 0.0426672 0.0492654 0.050953 0.084896 0.0831214 0.074612 0.0363384 NA 0.0592397 0.0991412 0.0614344 0.0913777 0.0482212 0.057671 0.117842 0.0750558 0.117169 0.0940081 0.0785830 0.0657417 0.043918 0.071305 0.063590 0.0599919 0.0702154 0.0638305 0.0455171 0.0766482 0.0561258 5.1905e-02 0.06181738 0.1392285 0.040857 0.0564032 0.029375 0.0477029 0.0806154 14 0.0621868 0.0742808 -0.00209113 30 0.082089 0.082276 -0.00018695 0.30285896 9.3392e-01 insignificant 1.00000 1.000000 insignificant 0.28162066 9.7000e-01 insignificant 1.00000 1.000000 insignificant -0.00600362 0.59618333 insignificant 1.00000 insignificant 0.0621868 0.1011427 -0.01913098 28 0.082089 0.0711698 0.0109191 5.6241e-01 2.4723e-05 weaklyHypometh 1.0000e+00 2.7470e-03 weaklyHypometh 1.9593e-01 5.8696e-01 insignificant 9.7967e-01 1.0000e+00 insignificant -0.0044851 8.2176e-01 insignificant 1.0000e+00 insignificant 0.0621868 0.0665951 0.01571874 29 0.0820889 0.0430914 0.03899749 8.5766e-05 9.9669e-01 weaklyHypermeth 1.9492e-03 1.0000e+00 weaklyHypermeth 3.2792e-04 9.9998e-01 weaklyHypermeth 1.0931e-02 1.00000000 weaklyHypermeth 0.0125413 3.9340e-01 insignificant 1.0000e+00 insignificant 0.0742808 0.1011427 -0.0166949 28 0.082276 0.0711698 0.01110605 8.8240e-01 3.9617e-03 weaklyHypometh 1.0000e+00 3.9617e-01 insignificant 7.0082e-01 5.8818e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.00151852 9.3304e-01 insignificant 1.0000e+00 insignificant 0.0742808 0.0665951 1.7823e-02 29 0.0822758 0.0430914 3.9184e-02 4.2428e-03 9.9996e-01 weaklyHypermeth 6.7345e-02 1.0000e+00 weaklyHypermeth 2.4498e-02 9.9997e-01 weaklyHypermeth 3.8886e-01 1.0000e+00 insignificant 0.01854487 1.5151e-01 insignificant 1.0000e+00 insignificant 0.1011427 0.0665951 3.4896e-02 27 0.0711698 0.0430914 0.02807839 1.5489e-03 1.0000e+00 weaklyHypermeth 1.4081e-01 1.0000e+00 insignificant 3.4424e-01 1.0000e+00 insignificant 1.0000000 1.0000e+00 insignificant 1.7026e-02 4.0584e-01 insignificant 1.0000e+00 insignificant chr19 5750950 5751950 52874 DUS3L ENSG00000141994 0.768168 169 7 0.805721 178 7 0.728789 147 4 0.8709156 253 7 0.8525926 78 4 0.793342 270 8 0.7920068 128 4 0.8519337 159 8 0.6190602 196 7 0.928752 195 4 0.846863 203 8 0.8523674 59 4 0.89238714 278 8 0.862787 130 4 0.7194628 139 7 0.7142857 28 1 0.7147392 34 4 0.8077359 233 7 0.8787648 165 8 0.886157 172 6 0.673611 47 3 0.820909 128 4 0.857501 146 7 0.6779514 80 5 0.825034 134 7 0.8713656 220 8 0.704018 130 6 0.824306 59 4 0.832680 185 8 0.875027 244 8 0.8751726 195 8 0.8938743 237 7 0.3707837 184 6 0.3975641 200 8 0.3333333 69 2 0.6010417 77 8 0.3071625 153 6 0.4792647 224 8 0.852883 128 4 0.8564145 183 7 0.8822060 153 4 0.7885417 169 7 0.7651432 194 7 0.820212 0.7883332 0.720131 0.8193416 0.712666 0.834615 0.8102195 0.8500029 0.687636 0.880958 0.8761595 0.785908 0.8680831 0.8515198 0.7752562 0.7200903 0.6126592 0.8530768 0.8630387 0.885362 0.839620 0.7846737 0.849285 0.7067044 0.8556475 0.8012603 0.638105 0.882258 0.803115 0.8921205 0.8481311 0.8810307 0.1120975 0.1373852 0.1570686 4.6804e-01 0.13377417 0.2341683 0.848623 0.8934329 0.853938 0.8590878 0.8198429 4 0.8194833 0.8271468 -0.00561488 7 0.820741 0.830811 -0.01007030 0.84255676 4.7448e-01 insignificant 1.00000 1.000000 insignificant 0.63675903 7.8172e-01 insignificant 1.00000 1.000000 insignificant -0.00161262 0.95599858 insignificant 1.00000 insignificant 0.8194833 0.2789416 0.59326075 7 0.820741 0.4422391 0.3785018 4.4807e-40 9.9919e-01 hypermethylated 1.3578e-38 1.0000e+00 hypermethylated 7.2102e-10 9.9987e-01 hypermethylated 1.6023e-08 1.0000e+00 hypermethylated 0.3944832 1.0048e-04 hypermethylated 2.0933e-03 hypermethylated 0.8194833 0.8645707 -0.04058173 6 0.8207409 0.8004189 0.02032201 5.4619e-01 5.0501e-02 insignificant 1.0000e+00 8.2789e-01 insignificant 4.4872e-01 6.0217e-02 insignificant 1.0000e+00 1.00000000 insignificant -0.0196961 5.0249e-01 insignificant 1.0000e+00 insignificant 0.8271468 0.2789416 0.5646579 7 0.830811 0.4422391 0.38857207 2.0999e-27 9.9965e-01 hypermethylated 5.8332e-26 1.0000e+00 hypermethylated 1.0780e-07 9.9823e-01 hypermethylated 2.2937e-06 1.0000000 hypermethylated 0.39609581 5.5078e-05 hypermethylated 1.2809e-03 hypermethylated 0.8271468 0.8645707 -3.3503e-02 6 0.8308112 0.8004189 3.0392e-02 2.4765e-01 1.9228e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.2310e-01 1.6555e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01808350 5.8206e-01 insignificant 1.0000e+00 insignificant 0.2789416 0.8645707 -6.5780e-01 6 0.4422391 0.8004189 -0.35817976 9.7081e-01 3.1998e-17 hypomethylated 1.0000e+00 1.1034e-15 hypomethylated 9.5269e-01 5.7165e-06 hypomethylated 1.0000000 1.4658e-04 hypomethylated -4.1418e-01 5.7831e-05 hypomethylated 3.4018e-03 hypomethylated chr19 5752650 5753650 52875 DUS3L ENSG00000141994 0.495305 429 12 0.429512 233 13 0.617787 240 12 0.4966759 534 12 0.5602680 149 9 0.523235 474 12 0.5779923 237 13 0.6280685 243 11 0.4488999 193 10 0.498479 219 12 0.532193 365 13 0.5823865 106 10 0.51576734 165 10 0.460602 152 10 0.4178805 254 10 0.5537879 116 8 1.0000000 1 0 0.3698381 808 12 0.4239279 360 11 0.404005 324 12 0.366703 207 12 0.460386 248 12 0.332017 301 13 0.3443949 169 10 0.349020 530 13 0.3615811 321 13 0.266711 281 13 0.412595 161 10 0.486644 365 12 0.357730 343 13 0.3681282 388 11 0.4607491 311 12 0.0382730 369 13 0.0745202 555 13 0.2757135 461 11 0.0692308 200 11 0.1637905 333 15 0.1502042 584 13 0.333241 366 12 0.3527745 365 12 0.4192919 372 14 0.4527050 708 12 0.3519569 358 13 0.604152 0.5316502 0.681956 0.5196572 0.627587 0.563738 0.6290234 0.6122854 0.533180 0.623301 0.6201062 0.717651 0.5699688 0.5588533 0.5450504 0.6028539 NA 0.4989338 0.5313122 0.571520 0.545331 0.5754717 0.513423 0.4422669 0.5001335 0.5283096 0.478137 0.473285 0.500482 0.4522291 0.4921951 0.6128911 0.0465526 0.0696723 0.2499375 5.6808e-02 0.14121234 0.0848528 0.436777 0.4863201 0.557574 0.4805991 0.4733624 9 0.5483929 0.4660947 0.06232010 12 0.534961 0.297422 0.23753847 0.00036233 1.0000e+00 weaklyHypermeth 0.12078 1.000000 insignificant 0.00067265 1.0000e+00 weaklyHypermeth 0.33633 1.000000 insignificant 0.14627567 0.00023416 weaklyHypermeth 0.23416 insignificant 0.5481906 0.1259496 0.43711610 12 0.478660 0.1430786 0.3355815 4.0037e-48 1.0000e+00 hypermethylated 1.3806e-46 1.0000e+00 hypermethylated 2.1763e-21 1.0000e+00 hypermethylated 1.2802e-19 1.0000e+00 hypermethylated 0.3982085 1.1543e-06 hypermethylated 3.4980e-05 hypermethylated 0.5480287 0.4633133 0.08226174 12 0.4614720 0.3402211 0.12125091 1.1539e-03 8.9967e-01 weaklyHypermeth 1.8916e-02 1.0000e+00 weaklyHypermeth 7.5604e-03 9.9178e-01 weaklyHypermeth 1.4001e-01 1.00000000 insignificant 0.1448368 1.1468e-03 weaklyHypermeth 6.4842e-02 weaklyHypermeth 0.4665371 0.1259496 0.3613656 13 0.323875 0.1430786 0.18079597 4.4315e-31 1.0000e+00 hypermethylated 1.3848e-29 1.0000e+00 hypermethylated 4.0237e-16 1.0000e+00 hypermethylated 2.0119e-14 1.0000000 hypermethylated 0.25193286 2.6764e-04 hypermethylated 4.7793e-03 hypermethylated 0.4674457 0.4635272 1.9436e-02 12 0.3503897 0.3556857 -5.2960e-03 8.1305e-01 3.1662e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.0895e-01 7.8062e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00143892 9.6188e-01 insignificant 1.0000e+00 insignificant 0.1265060 0.4637078 -3.6818e-01 12 0.1919857 0.3592150 -0.16722927 9.9547e-01 7.6892e-23 hypomethylated 1.0000e+00 3.6615e-21 hypomethylated 1.0000e+00 2.0062e-11 hypomethylated 1.0000000 1.4330e-09 hypomethylated -2.5337e-01 2.9210e-04 hypomethylated 1.0353e-02 hypomethylated chr19 5904650 5905650 52878 CAPS ENSG00000105519 0.347368 46 1 0.402611 178 5 0.650000 24 1 0.6348485 59 1 0.4285714 26 1 0.562925 58 1 0.4097744 90 5 0.5804487 74 5 0.2833333 25 1 0.800000 8 0 0.489701 188 5 0.2500000 8 0 1.00000000 1 0 0.626667 17 1 0.6666667 15 0 0.0000000 5 0 NA 0 0 0.5570175 47 1 0.7420635 38 1 0.361111 44 1 0.316667 27 5 0.600000 9 0 0.378788 35 5 0.4903030 40 5 0.584103 56 2 0.6012846 119 5 0.666667 6 1 0.000000 1 0 0.270000 36 1 0.632955 183 5 0.4621526 195 5 0.5825893 61 5 0.0085106 86 5 0.0000000 34 1 0.0138889 143 4 0.2400000 56 5 0.0525000 107 5 0.0230801 117 5 0.457143 44 1 0.7018519 49 5 0.5390196 54 4 0.9500000 20 1 0.4219349 65 5 0.514170 0.4621997 0.634615 0.7336830 0.615385 0.797619 0.4965298 0.6034270 0.314103 0.923077 0.5475926 0.534642 NA 0.5897436 0.6666667 0.0000000 NA 0.8238866 0.7893773 0.386752 0.484615 0.5384615 0.420746 0.5634033 0.6617357 0.5785193 NA NA 0.365385 0.6145105 0.4972871 0.7730082 0.0163666 0.0000000 0.0262434 2.1538e-01 0.02019231 0.0170626 0.571429 0.7427350 0.590422 NA 0.5377984 0 0.5570825 0.5286458 0.00423195 5 0.417324 0.511125 -0.09380163 0.61595288 2.2865e-01 insignificant 1.00000 1.000000 insignificant 0.09154840 7.1561e-01 insignificant 1.00000 1.000000 insignificant 0.04996770 0.51922737 lowCoverage 1.00000 lowCoverage 0.5569620 0.0313076 0.52504495 5 0.472879 0.0300085 0.4428707 1.4514e-22 1.0000e+00 hypermethylated 2.8459e-21 1.0000e+00 hypermethylated 1.6999e-07 1.0000e+00 hypermethylated 3.0907e-06 1.0000e+00 hypermethylated 0.4590968 4.3937e-07 lowCoverage 1.5177e-05 lowCoverage 0.5557895 0.6594828 -0.02443420 2 0.4053250 0.5367777 -0.13145272 9.0684e-01 4.5703e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.9153e-01 7.1790e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage -0.0985631 4.0164e-01 lowCoverage 1.0000e+00 lowCoverage 0.5287958 0.0313653 0.4943751 5 0.513350 0.0360102 0.47734011 8.8631e-26 1.0000e+00 hypermethylated 2.3324e-24 1.0000e+00 hypermethylated 2.5896e-08 1.0000e+00 hypermethylated 6.0224e-07 1.0000000 hypermethylated 0.40912905 1.6814e-05 lowCoverage 4.4247e-04 lowCoverage 0.5287958 0.6608696 -4.2085e-02 2 0.5133503 0.5514888 -3.8139e-02 7.5921e-01 2.9956e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.1112e-01 2.7936e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.14853085 2.2733e-01 lowCoverage 1.0000e+00 lowCoverage 0.0313076 0.6580087 -6.3318e-01 2 0.0300085 0.4595740 -0.42956552 1.0000e+00 5.1175e-13 lowCoverage 1.0000e+00 1.4621e-11 lowCoverage 1.0000e+00 3.9935e-06 lowCoverage 1.0000000 1.0509e-04 lowCoverage -5.5766e-01 2.6893e-03 lowCoverage 4.7126e-02 lowCoverage chr19 5934950 5935950 52881 RANBP3 ENSG00000031823 0.710635 118 5 0.606116 183 5 0.501891 57 5 0.6406469 191 5 0.5877778 39 4 0.673776 224 5 0.5562937 95 5 0.6720448 74 5 0.5363636 37 3 0.444444 9 0 0.609229 140 5 0.2916667 7 0 0.60000000 17 3 0.680556 29 3 0.5833333 10 0 0.5333333 9 0 0.4416782 405 3 0.6869839 133 5 0.6500000 57 4 0.667759 172 5 0.616667 14 0 0.500000 5 0 0.746667 41 4 0.6200000 61 5 0.753747 107 5 0.6131373 204 5 0.600000 21 3 0.566667 12 0 0.645000 77 5 0.694204 168 5 0.7012626 152 5 0.6248296 148 5 0.6439873 146 5 0.6769574 101 5 0.4369220 54 3 0.7377049 145 4 0.6160465 144 5 0.6595529 185 5 0.686956 222 5 0.6086400 207 5 0.6674628 192 5 0.5825397 50 4 0.7176203 185 5 0.540722 0.4375888 0.319803 0.4969522 0.371032 0.523561 0.3545205 0.4768307 0.330087 0.386710 0.4139075 0.187425 0.4142857 0.4771825 0.4732673 0.2460317 0.4327258 0.5268770 0.4470899 0.477484 0.482143 0.4540639 0.569841 0.4621212 0.5900891 0.4582666 0.371429 0.333333 0.511310 0.5069566 0.5329786 0.4813973 0.4559788 0.5013402 0.4470210 6.0019e-01 0.41434416 0.5077970 0.502323 0.4576454 0.483228 0.3956916 0.5458958 0 0.6291127 0.7247525 -0.04403479 5 0.626515 0.663112 -0.03659696 0.39447963 1.8428e-02 weaklyHypometh 1.00000 0.682511 insignificant 0.94683969 9.5340e-02 insignificant 1.00000 1.000000 insignificant -0.05645522 0.08334627 lowCoverage 1.00000 lowCoverage 0.6291127 0.7083871 -0.04396038 5 0.626515 0.6636681 -0.0371530 4.2058e-01 2.9296e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 5.9661e-01 1.7476e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0448021 3.7487e-01 lowCoverage 1.0000e+00 lowCoverage 0.6291127 0.7535047 -0.04298473 5 0.6265151 0.6637895 -0.03727444 6.7061e-01 5.2304e-02 insignificant 1.0000e+00 8.3443e-01 insignificant 8.1455e-01 2.9472e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0689173 6.6192e-02 lowCoverage 7.5118e-01 lowCoverage 0.7247525 0.7083871 -0.0042454 5 0.663112 0.6636681 -0.00055604 7.1639e-01 4.8827e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.7202e-01 6.5571e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.01165315 8.1010e-01 lowCoverage 1.0000e+00 lowCoverage 0.7247525 0.7535047 -3.9672e-03 5 0.6631120 0.6637895 -6.7748e-04 7.8425e-01 6.1441e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.4623e-01 9.2029e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01246212 7.1175e-01 lowCoverage 1.0000e+00 lowCoverage 0.7083871 0.7535047 2.5567e-05 5 0.6636681 0.6637895 -0.00012144 4.8197e-01 6.6671e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.6870e-01 8.3818e-01 insignificant 1.0000000 1.0000e+00 insignificant -2.4115e-02 6.3362e-01 lowCoverage 1.0000e+00 lowCoverage chr19 6007950 6008950 52883 RANBP3 ENSG00000031823 0.887913 435 8 0.657567 362 9 0.685805 178 8 0.9176949 423 8 0.9154233 93 8 0.886569 516 9 0.8450065 108 5 0.8930362 330 9 0.8620777 209 8 0.877819 151 8 0.888279 382 8 0.6936232 76 4 0.89340897 409 8 0.864086 232 8 0.8644634 283 8 0.7846246 81 3 0.8291005 48 6 0.8521007 464 8 0.8391294 274 8 0.827661 391 9 0.798942 93 8 0.538394 147 9 0.806883 243 9 0.7133109 172 8 0.902277 92 5 0.8698541 479 10 0.858641 174 8 0.778509 132 7 0.903180 337 8 0.922883 520 8 0.9280513 374 9 0.8999309 455 9 0.1106640 421 9 0.1409544 139 8 0.1049114 324 8 0.8888889 7 0 0.0807981 516 9 0.8319756 370 8 0.718274 292 8 0.8605299 313 8 0.8570482 282 8 0.7567245 209 8 0.6766504 340 8 0.899503 0.8302542 0.777467 0.8988792 0.863324 0.894549 0.8742641 0.8957948 0.879607 0.933680 0.8964973 0.766877 0.8738980 0.9135269 0.8555780 0.7327566 0.6566273 0.8340035 0.9163111 0.883851 0.955569 0.6649122 0.900017 0.8289916 0.9265834 0.8720264 0.784011 0.846724 0.909491 0.9135197 0.9211919 0.9138633 0.1567966 0.0372114 0.2514444 6.9518e-01 0.05094003 0.7937828 0.767731 0.8651472 0.837258 0.8244200 0.8314424 3 0.8606061 0.8654444 -0.01055049 8 0.808942 0.779121 0.02982103 0.84025775 5.5169e-01 insignificant 1.00000 1.000000 insignificant 0.92651825 3.4447e-01 insignificant 1.00000 1.000000 insignificant 0.01153139 0.75646468 insignificant 1.00000 insignificant 0.8607386 0.2329769 0.62721341 8 0.839836 0.2037622 0.6360737 8.3534e-52 1.0000e+00 hypermethylated 3.0939e-50 1.0000e+00 hypermethylated 2.1258e-11 1.0000e+00 hypermethylated 5.4508e-10 1.0000e+00 hypermethylated 0.4785706 2.9313e-02 weaklyHypermeth 2.4882e-01 insignificant 0.8614647 0.8189415 0.06070153 8 0.8573933 0.7436209 0.11377241 2.2458e-07 9.9164e-01 weaklyHypermeth 9.2775e-06 1.0000e+00 weaklyHypermeth 5.2521e-04 9.7721e-01 weaklyHypermeth 1.5447e-02 1.00000000 weaklyHypermeth 0.0644241 1.6551e-01 insignificant 1.0000e+00 insignificant 0.8659826 0.2329769 0.6342537 8 0.857033 0.2037622 0.65327054 7.5336e-32 1.0000e+00 hypermethylated 2.5112e-30 1.0000e+00 hypermethylated 6.0797e-10 1.0000e+00 hypermethylated 1.6432e-08 1.0000000 hypermethylated 0.46703921 3.1369e-02 weaklyHypermeth 2.8779e-01 insignificant 0.8663537 0.8189415 7.5057e-02 8 0.8623115 0.7436209 1.1869e-01 5.8486e-04 9.9928e-01 weaklyHypermeth 1.1936e-02 1.0000e+00 weaklyHypermeth 5.0840e-03 9.9762e-01 weaklyHypermeth 1.1052e-01 1.0000e+00 insignificant 0.05289267 3.0628e-01 insignificant 1.0000e+00 insignificant 0.2349603 0.8189415 -5.7592e-01 8 0.2264024 0.7436209 -0.51721853 1.0000e+00 2.8269e-11 hypomethylated 1.0000e+00 7.0671e-10 hypomethylated 1.0000e+00 1.1190e-04 hypomethylated 1.0000000 2.1113e-03 hypomethylated -4.1415e-01 4.7231e-02 weaklyHypometh 4.0551e-01 insignificant chr19 6016350 6017350 52885 RANBP3 ENSG00000031823 0.802258 374 11 0.699015 316 13 0.671136 283 15 0.7136417 225 11 0.7646818 140 15 0.678364 447 15 0.6873041 225 15 0.7342365 251 14 0.6763968 186 14 0.793693 216 14 0.670008 589 15 0.6556170 141 10 0.60898570 204 11 0.862963 74 8 0.7400135 180 14 0.6648232 104 11 0.5234171 92 8 0.7740321 319 11 0.7097472 291 14 0.691139 425 15 0.703823 74 8 0.723548 145 10 0.761176 179 11 0.8067470 186 12 0.767347 65 7 0.7244643 420 15 0.684456 169 11 0.756944 66 5 0.677655 168 14 0.709112 387 15 0.7335236 320 14 0.6915054 504 15 0.5931332 231 12 0.5219306 193 14 0.5560648 267 15 0.5803530 93 8 0.5481430 182 12 0.5250317 358 15 0.624203 286 15 0.7541835 442 15 0.7954614 243 11 0.7094801 332 11 0.6354115 356 13 0.755044 0.6410646 0.626579 0.7188893 0.748394 0.697977 0.7304725 0.7072248 0.667213 0.728732 0.6798285 0.677724 0.7596959 0.7386615 0.7406562 0.7245875 0.7208235 0.7443247 0.7483656 0.736378 0.710020 0.7708639 0.758558 0.7320690 0.7312387 0.7558519 0.676761 0.733595 0.648582 0.6864631 0.7181323 0.7029050 0.6351148 0.5667259 0.6897282 6.2077e-01 0.62931614 0.6656737 0.663712 0.7181121 0.772529 0.7410942 0.7011698 5 0.7253050 0.7521431 -0.01015644 14 0.716295 0.728818 -0.01252304 0.97653745 3.7151e-01 insignificant 1.00000 1.000000 insignificant 0.99678377 2.7278e-01 insignificant 1.00000 1.000000 insignificant -0.02228488 0.27227678 insignificant 1.00000 insignificant 0.7256062 0.6087613 0.11777766 14 0.725750 0.5878152 0.1379351 8.5365e-20 9.9798e-01 weaklyHypermeth 1.5808e-18 1.0000e+00 weaklyHypermeth 6.6560e-08 9.9968e-01 weaklyHypermeth 1.3051e-06 1.0000e+00 weaklyHypermeth 0.1519643 1.7537e-07 weaklyHypermeth 7.0146e-06 weaklyHypermeth 0.7255328 0.7203134 -0.01026508 11 0.7211097 0.6996544 0.02145527 1.0872e-01 3.1506e-01 insignificant 8.9854e-01 1.0000e+00 insignificant 9.0615e-01 1.7324e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0023258 9.5192e-01 insignificant 1.0000e+00 insignificant 0.7525196 0.6087613 0.1353767 14 0.742278 0.5878152 0.15446276 1.0083e-16 9.9909e-01 weaklyHypermeth 1.8671e-15 1.0000e+00 weaklyHypermeth 2.4260e-07 1.0000e+00 weaklyHypermeth 4.7568e-06 1.0000000 weaklyHypermeth 0.17424916 6.5207e-08 weaklyHypermeth 3.6226e-06 weaklyHypermeth 0.7522455 0.7203134 3.5336e-03 11 0.7350989 0.6996544 3.5444e-02 3.5769e-02 5.6797e-01 weaklyHypermeth 3.9306e-01 1.0000e+00 insignificant 5.7415e-01 9.5715e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02461073 5.1355e-01 insignificant 1.0000e+00 insignificant 0.6078728 0.7203134 -8.9145e-02 11 0.5620537 0.6996544 -0.13760077 9.9994e-01 1.4196e-06 weaklyHypometh 1.0000e+00 2.0877e-05 weaklyHypometh 1.0000e+00 2.2472e-04 weaklyHypometh 1.0000000 3.8087e-03 weaklyHypometh -1.4964e-01 8.0479e-03 weaklyHypometh 1.1335e-01 insignificant chr19 6155650 6156650 52895 ACSBG2 ENSG00000130377 0.905925 234 5 0.791929 129 5 0.949583 153 5 0.9260819 218 5 0.9441034 135 5 0.909787 256 5 0.9106548 188 5 0.9467449 119 5 0.9015810 112 5 0.920911 113 5 0.912123 227 5 0.9250000 50 5 0.91976190 106 5 0.941667 86 5 0.7787538 151 5 0.9428571 60 5 NA 0 0 0.9042309 307 5 0.9262313 344 5 0.913199 316 5 0.952381 88 5 1.000000 12 1 0.915485 260 5 0.9053847 73 5 1.000000 28 2 0.9113363 221 5 0.766496 135 5 0.963333 64 5 0.945978 217 5 0.961685 206 5 0.9088649 247 5 0.9148387 247 5 0.8587929 225 5 0.7157861 239 5 0.9438710 269 5 NA 0 0 0.7462963 115 5 0.7810515 319 5 0.963635 328 5 0.9630820 299 5 0.9478704 165 5 0.8976794 492 5 0.9248773 191 5 0.897776 0.8094252 0.940454 0.9251799 0.933897 0.900702 0.9045556 0.9406467 0.902963 0.915716 0.9132207 0.936508 0.9109095 0.9410273 0.9390742 0.9304611 NA 0.8915078 0.9175839 0.916076 0.929705 1.0000000 0.914188 0.9064344 1.0000000 0.9041555 0.744829 0.968959 0.941483 0.9525155 0.9023808 0.9024748 0.8354707 0.8323574 0.9328554 NA 0.89159318 0.7369097 0.961656 0.9601243 0.943749 0.8795370 0.9158505 5 0.9170451 0.9220490 -0.00564724 5 0.914376 0.918303 -0.00392770 0.65236895 2.4448e-01 insignificant 1.00000 1.000000 insignificant 0.96412827 1.8456e-01 insignificant 1.00000 1.000000 insignificant -0.01980861 0.34859638 lowCoverage 1.00000 lowCoverage 0.9170451 0.8489270 0.03810220 5 0.914376 0.8671980 0.0471775 3.0367e-03 9.2222e-02 weaklyHypermeth 1.8672e-02 1.0000e+00 weaklyHypermeth 4.1755e-02 1.6998e-01 weaklyHypermeth 2.5775e-01 1.0000e+00 insignificant 0.0998470 7.1360e-02 lowCoverage 4.9113e-01 lowCoverage 0.9170451 0.9505085 -0.02509630 5 0.9143755 0.9357960 -0.02142044 8.3959e-01 4.7622e-02 weaklyHypometh 1.0000e+00 7.9370e-01 insignificant 9.9622e-01 2.7568e-02 weaklyHypometh 1.0000e+00 0.65638124 insignificant -0.0304223 9.2862e-02 lowCoverage 9.0157e-01 lowCoverage 0.9220490 0.8489270 0.0441566 5 0.918303 0.8671980 0.05110525 1.2736e-01 1.9017e-01 insignificant 5.8250e-01 1.0000e+00 insignificant 6.7187e-02 6.7109e-01 insignificant 3.9062e-01 1.0000000 insignificant 0.11965564 4.0331e-02 lowCoverage 3.5070e-01 lowCoverage 0.9220490 0.9505085 -1.8093e-02 5 0.9183032 0.9357960 -1.7493e-02 9.7807e-01 9.2969e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 7.9796e-01 5.3987e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01061368 6.3202e-01 lowCoverage 1.0000e+00 lowCoverage 0.8489270 0.9505085 -6.9500e-02 5 0.8671980 0.9357960 -0.06859799 9.0501e-01 8.5105e-02 insignificant 1.0000e+00 4.5029e-01 insignificant 9.6086e-01 7.0695e-02 insignificant 1.0000000 4.7446e-01 insignificant -1.3027e-01 3.1543e-02 lowCoverage 2.9758e-01 lowCoverage chr19 6184450 6185450 52896 ACSBG2 ENSG00000130377 0.928436 318 7 0.798501 289 7 0.783384 61 3 0.8847751 155 7 0.6861098 101 7 0.853289 368 7 0.9476992 78 6 0.8899172 174 7 0.8618244 192 7 0.941201 211 7 0.911418 255 7 0.7681606 66 5 0.89644062 254 7 0.891026 72 6 0.8920240 200 7 0.9365079 43 5 0.5119048 25 2 0.7262994 242 7 0.9171537 170 7 0.702371 171 4 0.908297 124 6 0.778677 115 7 0.887366 197 7 0.8208488 78 6 0.905380 80 5 0.9298762 351 7 0.777365 130 6 0.827664 57 6 0.837440 279 7 0.933059 415 7 0.9098655 330 7 0.9284490 384 7 0.6847105 297 7 0.8089569 137 7 1.0000000 154 4 0.5041283 69 5 0.7416482 111 7 0.8949830 322 7 0.894111 155 7 0.8966646 225 7 0.9791667 45 3 0.9003728 205 7 0.8312058 218 7 0.938345 0.8968303 0.804786 0.9015078 0.893512 0.872141 0.9285677 0.9174815 0.860584 0.939523 0.9072745 0.780441 0.9043784 0.9095066 0.9109216 0.9430199 0.5760684 0.9344935 0.9424668 0.778956 0.922040 0.8409320 0.877242 0.8740912 0.9016539 0.9191603 0.826958 0.893610 0.827711 0.9286720 0.9186373 0.9325401 0.6833775 0.7085470 0.9195993 6.9371e-01 0.75010151 0.9231780 0.912767 0.9233381 0.934117 0.9077225 0.8708587 4 0.8859216 0.8905512 -0.00602428 7 0.787240 0.917900 -0.13066070 0.81052088 2.6710e-01 insignificant 1.00000 1.000000 insignificant 0.75911971 2.7231e-01 insignificant 1.00000 1.000000 insignificant -0.03393520 0.26939950 insignificant 1.00000 insignificant 0.8868857 0.7697248 0.12183757 7 0.843978 0.6979864 0.1459915 4.6183e-06 9.9504e-01 weaklyHypermeth 3.9813e-05 1.0000e+00 weaklyHypermeth 2.9368e-02 9.7915e-01 weaklyHypermeth 1.9195e-01 1.0000e+00 insignificant 0.0640177 4.2287e-01 insignificant 1.0000e+00 insignificant 0.8875619 0.8514151 0.04181361 7 0.8931175 0.8802615 0.01285607 7.0890e-03 2.6728e-01 weaklyHypermeth 9.0885e-02 1.0000e+00 weaklyHypermeth 5.3053e-01 6.2239e-02 insignificant 1.0000e+00 1.00000000 insignificant -0.0638820 8.3079e-02 insignificant 8.4775e-01 insignificant 0.8905081 0.7697248 0.1228650 7 0.907638 0.6979864 0.20965145 2.9198e-04 9.9285e-01 weaklyHypermeth 2.3359e-03 1.0000e+00 weaklyHypermeth 4.3417e-02 9.2632e-01 weaklyHypermeth 2.7479e-01 1.0000000 insignificant 0.09795287 2.2840e-01 insignificant 1.0000e+00 insignificant 0.8904649 0.8514151 5.0164e-02 7 0.8944432 0.8802615 1.4182e-02 7.8090e-03 1.9573e-01 weaklyHypermeth 1.1156e-01 1.0000e+00 insignificant 3.7856e-01 8.1076e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02994684 3.2989e-01 insignificant 1.0000e+00 insignificant 0.7704316 0.8514151 -7.9327e-02 7 0.7976987 0.8802615 -0.08256279 9.7003e-01 1.5803e-02 weaklyHypometh 1.0000e+00 1.0536e-01 insignificant 9.6935e-01 1.9704e-02 weaklyHypometh 1.0000000 1.6986e-01 insignificant -1.2790e-01 1.3503e-01 insignificant 8.5457e-01 insignificant chr19 6189350 6190350 52897 ACSBG2 ENSG00000130377 0.972222 72 7 0.796651 268 9 0.854401 179 9 0.8750000 52 1 0.8448087 145 8 0.715301 96 5 0.7064486 120 6 0.7241272 208 8 0.8467306 140 7 0.903529 172 9 0.892676 332 9 0.7652734 75 4 0.97470682 248 9 1.000000 6 1 0.9520953 133 9 0.6852679 25 2 0.9388906 100 6 0.9550000 32 3 0.8459581 303 9 0.995807 67 1 0.909758 124 9 0.833333 5 0 0.765152 116 8 0.9733333 63 6 1.000000 2 0 0.8837715 273 9 0.878836 86 5 0.950000 25 2 0.836531 270 8 0.860947 229 9 0.8557901 281 8 0.8305556 119 6 0.2583357 340 9 0.4066481 237 9 0.0862274 225 5 0.9444444 21 1 0.1432540 93 6 0.9519805 221 8 0.943939 42 1 0.8525610 76 4 1.0000000 20 1 0.9111722 41 1 0.7914818 41 3 1.000000 0.8514362 0.855357 1.0000000 0.925420 0.918911 0.7596284 0.9696085 0.799612 1.000000 0.8606234 0.839796 0.9908425 0.9741128 0.9216640 0.7263579 0.9421563 1.0000000 0.9307010 0.975741 0.949426 0.9469556 0.962798 0.9702381 0.9750933 0.8724653 0.863946 0.839286 0.937391 0.9241935 0.9558824 0.9785714 0.3405205 0.1896557 0.3010850 1.0000e+00 0.06079932 0.9571219 0.958198 0.9843206 1.000000 0.9008700 0.8552481 1 0.8985193 0.9276274 -0.03438424 8 0.760068 0.794148 -0.03408035 0.99975256 1.1739e-01 insignificant 1.00000 1.000000 insignificant 0.99894489 3.5763e-01 insignificant 1.00000 1.000000 insignificant -0.01925589 0.52489778 insignificant 1.00000 insignificant 0.8988074 0.4283201 0.47327744 9 0.812082 0.4217287 0.3903528 8.2692e-35 9.9806e-01 hypermethylated 2.2349e-33 1.0000e+00 hypermethylated 1.2703e-07 9.9932e-01 hypermethylated 2.3968e-06 1.0000e+00 hypermethylated 0.3970964 5.4625e-02 insignificant 4.0463e-01 insignificant 0.8984827 0.9262673 -0.03227281 1 0.7382560 0.7516606 -0.01340460 7.8457e-01 4.8604e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.9931e-01 1.6599e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage -0.0375862 4.0593e-01 lowCoverage 1.0000e+00 lowCoverage 0.9280757 0.4283201 0.4977552 8 0.852978 0.4217287 0.43124925 5.6381e-23 9.9999e-01 hypermethylated 1.3424e-21 1.0000e+00 hypermethylated 1.8129e-07 1.0000e+00 hypermethylated 3.6998e-06 1.0000000 hypermethylated 0.41635224 4.7119e-02 weaklyHypermeth 3.8941e-01 insignificant 0.9263224 0.9315068 -5.7447e-03 1 0.7754345 0.8425697 -6.7135e-02 5.6128e-01 7.7864e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.9390e-01 3.4831e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.01833027 6.6932e-01 lowCoverage 1.0000e+00 lowCoverage 0.4283201 0.9305556 -4.8128e-01 1 0.4217287 0.8268266 -0.40509789 1.0000e+00 3.0173e-08 lowCoverage 1.0000e+00 6.0345e-07 lowCoverage 1.0000e+00 1.1439e-04 lowCoverage 1.0000000 2.1184e-03 lowCoverage -4.3468e-01 4.0600e-02 lowCoverage 3.6909e-01 lowCoverage chr19 6219950 6220950 52898 ACSBG2 ENSG00000130377 0.865983 204 7 0.921670 111 7 0.810317 90 8 0.9004324 197 7 0.9470109 84 7 0.929280 301 7 0.9035943 147 8 0.9503157 107 8 0.9545734 118 7 0.852086 80 7 0.903995 148 7 0.9365758 87 7 0.89200654 107 7 0.925926 38 2 0.9730330 153 7 0.9078757 87 5 0.9256277 62 5 0.8845754 215 7 0.9077185 120 7 0.917761 226 7 0.949405 97 7 0.917904 63 7 0.895439 204 7 0.9202457 98 6 0.923469 51 5 0.9467044 150 7 0.947261 143 7 0.692708 58 6 0.984149 92 7 0.945950 154 8 0.9644337 139 8 0.9035273 226 7 0.8286096 89 7 0.9077381 70 7 0.8481481 165 5 0.9841270 54 5 0.9131008 133 8 0.9455357 104 5 0.964187 201 7 0.9426307 256 7 0.9367359 201 7 0.9518636 209 7 0.9430564 189 7 0.886749 0.9125571 0.834474 0.9063536 0.926847 0.926993 0.9232663 0.9330798 0.946582 0.849347 0.9056197 0.926256 0.8934290 0.9153872 0.9646198 0.8974658 0.9420774 0.8898247 0.9182821 0.905964 0.936629 0.9158313 0.891998 0.9529102 0.9120949 0.9422146 0.928702 0.790875 0.975313 0.9355492 0.9628750 0.8854242 0.8164181 0.8891001 0.7462125 9.9155e-01 0.87986857 0.9383555 0.966267 0.9382825 0.944454 0.9637268 0.9427086 5 0.9097688 0.9206780 -0.01101091 7 0.903070 0.924143 -0.02107205 0.87601642 5.0792e-02 insignificant 1.00000 1.000000 insignificant 0.95314632 6.8131e-02 insignificant 1.00000 1.000000 insignificant -0.00541504 0.81847683 insignificant 1.00000 insignificant 0.9097688 0.8373984 0.07096444 7 0.903070 0.8737880 0.0292825 4.6972e-05 8.9181e-03 weaklyHypermeth 3.6132e-04 4.0537e-01 weaklyHypermeth 4.7619e-01 8.2745e-03 inconclusive 1.0000e+00 5.5163e-01 insignificant 0.0059747 8.2071e-01 insignificant 1.0000e+00 insignificant 0.9097688 0.9507576 -0.03786646 7 0.9030705 0.9525508 -0.04948031 9.9385e-01 1.6058e-04 weaklyHypometh 1.0000e+00 1.4598e-02 weaklyHypometh 9.8599e-01 2.8086e-03 weaklyHypometh 1.0000e+00 0.16521037 insignificant -0.0371769 8.9322e-04 weaklyHypometh 6.4842e-02 weaklyHypometh 0.9206780 0.8373984 0.0849784 7 0.924143 0.8737880 0.05035456 1.7456e-02 2.6012e-01 weaklyHypermeth 1.0032e-01 1.0000e+00 insignificant 6.7794e-01 3.0530e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.01138972 7.2895e-01 insignificant 1.0000e+00 insignificant 0.9206780 0.9507576 -2.5769e-02 7 0.9241425 0.9525508 -2.8408e-02 5.7050e-01 4.9539e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 5.5189e-01 2.6439e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03176185 1.7611e-01 insignificant 1.0000e+00 insignificant 0.8373984 0.9507576 -1.1399e-01 7 0.8737880 0.9525508 -0.07876283 9.3527e-01 1.8115e-02 weaklyHypometh 1.0000e+00 1.1763e-01 insignificant 3.3137e-01 5.5361e-01 insignificant 1.0000000 1.0000e+00 insignificant -4.3152e-02 1.3171e-01 insignificant 8.3894e-01 insignificant chr19 6222350 6223350 52899 ACSBG2 ENSG00000130377 0.742812 226 9 0.711752 320 9 0.628428 349 9 0.7699571 201 9 0.7792746 217 9 0.773793 324 9 0.7117621 271 9 0.7687661 244 9 0.7152578 218 9 0.743114 256 9 0.800927 469 9 0.8148296 193 8 0.83013901 303 9 0.683108 167 7 0.8352712 347 9 0.8262363 207 8 0.7023810 43 3 0.6588081 372 9 0.9152326 556 9 0.777588 323 9 0.791126 143 9 0.788842 121 7 0.764191 315 9 0.8003471 133 9 0.720082 86 8 0.8484693 365 9 0.717615 347 9 0.787998 123 9 0.636804 325 9 0.835329 394 9 0.7878902 309 9 0.8329360 402 9 0.0276043 407 9 0.0284271 451 9 0.1250000 218 7 0.2863248 66 6 0.1269997 388 9 0.4641947 430 9 0.808667 230 9 0.7121604 305 9 0.7348136 212 7 0.6588161 275 9 0.6156926 236 8 0.732024 0.6781466 0.597253 0.7398743 0.698021 0.761015 0.7480936 0.7457561 0.688902 0.719319 0.7539844 0.830829 0.8032770 0.7698277 0.7827870 0.7644092 0.6545858 0.5905526 0.8805551 0.762364 0.765168 0.6881645 0.751035 0.8470738 0.6584813 0.8012430 0.738551 0.873902 0.696070 0.8073428 0.7705227 0.8265679 0.0222942 0.0223191 0.0768690 2.9162e-01 0.02368784 0.4313524 0.748289 0.6493979 0.759464 0.6788896 0.5811341 7 0.7518730 0.7793013 -0.02382923 9 0.802091 0.602031 0.20005953 0.97818896 3.6087e-01 insignificant 1.00000 1.000000 insignificant 0.93369512 1.8640e-01 insignificant 1.00000 1.000000 insignificant -0.01649716 0.48076071 insignificant 1.00000 insignificant 0.7516071 0.1122449 0.63293420 9 0.742718 0.1589212 0.5837965 1.0433e-64 1.0000e+00 hypermethylated 4.9682e-63 1.0000e+00 hypermethylated 8.1431e-18 1.0000e+00 hypermethylated 3.2572e-16 1.0000e+00 hypermethylated 0.5830468 2.7409e-04 hypermethylated 5.0961e-03 hypermethylated 0.7517870 0.7011129 0.05411378 9 0.7696863 0.7082187 0.06146760 2.0284e-05 5.1927e-01 weaklyHypermeth 5.7953e-04 1.0000e+00 weaklyHypermeth 2.4502e-02 5.3247e-01 weaklyHypermeth 3.5003e-01 1.00000000 insignificant 0.0534419 1.9347e-01 insignificant 1.0000e+00 insignificant 0.7799215 0.1122449 0.6566085 9 0.715974 0.1589212 0.55705240 1.5036e-51 1.0000e+00 hypermethylated 8.3533e-50 1.0000e+00 hypermethylated 1.8439e-15 1.0000e+00 hypermethylated 8.0170e-14 1.0000000 hypermethylated 0.59954394 2.1669e-04 hypermethylated 4.0854e-03 hypermethylated 0.7801766 0.7011129 8.6460e-02 9 0.7955263 0.7082187 8.7308e-02 1.0422e-06 8.8931e-01 weaklyHypermeth 4.3425e-05 1.0000e+00 weaklyHypermeth 6.2484e-03 9.2290e-01 weaklyHypermeth 1.2519e-01 1.0000e+00 insignificant 0.06993902 1.0708e-01 insignificant 1.0000e+00 insignificant 0.1119632 0.7011129 -5.6579e-01 9 0.1488014 0.7082187 -0.55941734 1.0000e+00 1.2432e-20 hypomethylated 1.0000e+00 5.1802e-19 hypomethylated 1.0000e+00 8.2671e-10 hypomethylated 1.0000000 3.5944e-08 hypomethylated -5.2960e-01 2.2076e-04 hypomethylated 8.4908e-03 hypomethylated chr19 6223850 6224850 52900 ACSBG2 ENSG00000130377 0.695763 657 16 0.723826 392 16 0.531199 389 15 0.7231849 607 16 0.7579932 116 13 0.844266 718 16 0.6624356 237 12 0.7931420 368 16 0.7157568 258 15 0.783042 250 15 0.780856 559 16 0.8636151 116 7 0.70903790 451 16 0.772727 20 2 0.6168433 276 16 0.6787241 73 7 0.5953776 134 14 0.7811578 708 16 0.8465830 353 16 0.747181 556 15 0.700894 214 15 0.639293 264 15 0.741685 357 16 0.7294277 187 16 0.789674 193 15 0.7925876 653 16 0.719145 264 16 0.716924 136 10 0.689911 361 16 0.705000 665 16 0.7027732 604 16 0.8203820 811 16 0.5701927 593 16 0.3033615 315 16 0.6761582 761 9 0.6030251 137 12 0.6068135 242 16 0.6698166 754 16 0.602866 662 16 0.6525483 894 16 0.6848443 555 15 0.6452285 684 16 0.6947224 688 16 0.769806 0.7813781 0.633754 0.7737251 0.774379 0.854572 0.7610134 0.8226342 0.755436 0.816109 0.8216678 0.855963 0.7763578 NA 0.7358079 0.7379230 0.7299464 0.8046006 0.8764688 0.781211 0.740694 0.7417653 0.754542 0.7329173 0.8370394 0.8174278 0.762853 0.780092 0.744891 0.7940304 0.7550979 0.8362825 0.5794167 0.3055429 0.7120342 6.4248e-01 0.65289555 0.6985321 0.680445 0.7356765 0.732252 0.7197975 0.7903445 9 0.7449572 0.7161071 0.00930987 16 0.739890 0.732706 0.00718394 0.48174764 8.5849e-01 insignificant 1.00000 1.000000 insignificant 0.44293847 6.7909e-01 insignificant 1.00000 1.000000 insignificant 0.00216095 0.92900996 insignificant 1.00000 insignificant 0.7449572 0.6192006 0.09540669 16 0.739890 0.6355025 0.1043877 9.1553e-12 9.4307e-01 weaklyHypermeth 1.1444e-10 1.0000e+00 weaklyHypermeth 7.7151e-07 9.7930e-01 weaklyHypermeth 1.2648e-05 1.0000e+00 weaklyHypermeth 0.1595744 3.4996e-02 weaklyHypermeth 2.8066e-01 insignificant 0.7449572 0.6214819 0.09917396 16 0.7398903 0.6426691 0.09722118 1.5343e-07 6.8375e-01 weaklyHypermeth 7.3063e-06 1.0000e+00 weaklyHypermeth 7.5617e-04 7.1198e-01 weaklyHypermeth 2.1005e-02 1.00000000 weaklyHypermeth 0.0750938 8.5223e-03 weaklyHypermeth 2.0291e-01 insignificant 0.7161071 0.6192006 0.0744192 16 0.732706 0.6355025 0.09720379 1.8291e-06 9.7788e-01 weaklyHypermeth 1.8476e-05 1.0000e+00 weaklyHypermeth 4.0814e-06 9.9805e-01 weaklyHypermeth 6.6908e-05 1.0000000 weaklyHypermeth 0.15741341 3.7014e-02 weaklyHypermeth 3.2755e-01 insignificant 0.7158632 0.6215906 1.1000e-01 16 0.7092138 0.6636886 4.5525e-02 3.3367e-05 7.4586e-01 weaklyHypermeth 9.0180e-04 1.0000e+00 weaklyHypermeth 4.3552e-04 7.0487e-01 weaklyHypermeth 1.3610e-02 1.0000e+00 weaklyHypermeth 0.07293283 6.9758e-03 weaklyHypermeth 3.0330e-01 insignificant 0.6192006 0.6214819 5.3023e-02 16 0.6355025 0.6426691 -0.00716655 6.5200e-02 5.0975e-03 inconclusive 1.0000e+00 3.9515e-02 inconclusive 6.6243e-01 5.3990e-03 inconclusive 1.0000000 6.0663e-02 inconclusive -8.4481e-02 2.0033e-01 insignificant 1.0000e+00 insignificant chr19 6426650 6427650 52903 CRB3 ENSG00000130545 0.000000 179 5 0.018382 184 5 0.000000 177 5 0.0043011 246 5 0.0000000 104 5 0.000000 217 5 0.0025316 229 5 0.0037736 148 3 0.0000000 135 3 0.000000 72 3 0.000000 188 5 0.0000000 79 3 0.00000000 59 3 0.000000 74 3 0.0339744 118 3 0.0000000 109 3 NA 0 0 0.0032051 247 3 0.1904762 172 5 0.000000 152 5 0.000000 65 3 0.000000 37 3 0.000000 90 3 0.0000000 109 3 0.000000 712 5 0.0060955 238 5 0.028571 117 5 0.000000 73 3 0.000000 187 5 0.016667 259 5 0.0000000 263 5 0.1666667 155 5 0.0000000 118 5 0.0032258 218 5 0.0000000 109 3 0.0562500 179 5 0.0054945 128 5 0.0091026 286 5 0.010000 180 5 0.0027027 179 5 0.0081633 124 3 0.0000000 285 3 0.0030303 165 5 0.000000 0.0094081 0.000000 0.0077473 0.000000 0.000000 0.0045601 0.0067971 0.000000 0.000000 0.0000000 0.000000 0.0000000 0.0000000 0.0336120 0.0000000 NA 0.0069279 0.0000000 0.000000 0.000000 0.0000000 0.000000 0.0000000 0.0000000 0.0101878 0.000000 0.000000 0.000000 0.0000000 0.0000000 0.0000000 0.0000000 0.0051593 0.0000000 0.0000e+00 0.01385571 0.0157230 0.018012 0.0048682 0.014704 0.0000000 0.0054583 3 0.0044998 0.0021720 0.00226176 5 0.046072 0.086518 -0.04044625 0.37569292 9.4569e-01 insignificant 1.00000 1.000000 insignificant 0.55100895 9.4246e-01 insignificant 1.00000 1.000000 insignificant -0.00465909 0.78675781 lowCoverage 1.00000 lowCoverage 0.0044998 0.0154589 -0.00711470 5 0.046072 0.0207655 0.0253067 9.5858e-01 8.7274e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.5398e-01 6.3940e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0011621 9.3186e-01 lowCoverage 1.0000e+00 lowCoverage 0.0041594 0.0085745 -0.00370942 3 0.0052866 0.0043597 0.00092697 5.9368e-01 3.5440e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 6.3779e-01 4.3440e-01 lowCoverage 1.0000e+00 1.00000000 lowCoverage 0.0087283 4.0243e-01 lowCoverage 1.0000e+00 lowCoverage 0.0021692 0.0154143 -0.0112057 5 0.074159 0.0177990 0.05635964 9.9976e-01 7.7205e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9952e-01 7.1030e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.00582121 7.2685e-01 lowCoverage 1.0000e+00 lowCoverage 0.0017391 0.0085745 -6.9348e-03 3 0.0038221 0.0043597 -5.3753e-04 8.2953e-01 2.0513e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.3689e-01 1.7005e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.01338743 3.5457e-01 lowCoverage 1.0000e+00 lowCoverage 0.0154739 0.0085745 9.5651e-04 3 0.0249186 0.0043597 0.02055897 2.3802e-01 9.7338e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 6.6316e-01 9.0017e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage 7.5662e-03 4.4004e-01 lowCoverage 1.0000e+00 lowCoverage chr19 6695550 6696550 52910 TRIP10 ENSG00000125733 0.912872 537 16 0.673316 262 17 0.675609 339 21 0.9283557 658 20 0.9043323 220 20 0.929687 635 18 0.8501479 374 20 0.7665770 270 18 0.7684621 438 20 0.895936 444 14 0.890376 378 21 0.7307415 214 12 0.83924535 463 17 0.708154 240 14 0.8467931 304 14 0.8657895 107 5 0.8551693 145 12 0.6198051 674 16 0.8374662 271 16 0.918794 515 20 0.930415 179 18 0.707770 276 17 0.819439 458 12 0.9259011 223 14 0.835122 325 17 0.8229295 426 20 0.946630 317 16 0.837154 170 11 0.928195 376 16 0.871486 400 21 0.8411121 335 21 0.8981168 648 20 0.0877371 589 21 0.0380471 333 18 0.0647321 316 16 0.8479190 219 16 0.0354921 363 19 0.5827285 385 21 0.846952 414 16 0.7965961 531 16 0.8968693 494 16 0.9093537 495 12 0.6846441 493 16 0.897241 0.7831063 0.686771 0.9175155 0.922634 0.912992 0.9108735 0.8384371 0.824310 0.923979 0.9001566 0.818801 0.8460449 0.8592775 0.8538978 0.8285592 0.8636361 0.6406844 0.8975279 0.920711 0.861234 0.7374426 0.918387 0.9160455 0.8415563 0.8865258 0.947366 0.898923 0.941551 0.9377931 0.8476761 0.9077459 0.0429488 0.0112741 0.1185362 8.6680e-01 0.01761250 0.6973083 0.795184 0.8094999 0.883632 0.9113943 0.7827687 9 0.8463799 0.8828087 -0.03794317 17 0.805690 0.864697 -0.05900781 0.97739039 3.9046e-05 weaklyHypometh 1.00000 0.039046 weaklyHypometh 0.99623368 2.9162e-05 weaklyHypometh 1.00000 0.029162 weaklyHypometh -0.04280774 0.15070278 insignificant 1.00000 insignificant 0.8464520 0.2285714 0.63161523 17 0.812009 0.2068452 0.6051637 3.1435e-103 1.0000e+00 hypermethylated 4.4908e-101 1.0000e+00 hypermethylated 1.3886e-28 1.0000e+00 hypermethylated 1.9837e-26 1.0000e+00 hypermethylated 0.5447721 1.2121e-02 weaklyHypermeth 1.1768e-01 insignificant 0.8486066 0.8442522 0.00863284 16 0.8506760 0.7812965 0.06937947 5.7406e-03 9.6876e-01 weaklyHypermeth 7.6542e-02 1.0000e+00 weaklyHypermeth 1.1518e-01 9.9791e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0060016 9.0030e-01 insignificant 1.0000e+00 insignificant 0.8827803 0.2285714 0.6642478 20 0.858547 0.2068452 0.65170212 1.1341e-76 1.0000e+00 hypermethylated 1.4176e-74 1.0000e+00 hypermethylated 2.0712e-26 1.0000e+00 hypermethylated 3.4521e-24 1.0000000 hypermethylated 0.58757986 8.9797e-03 weaklyHypermeth 9.9774e-02 weaklyHypermeth 0.8838960 0.8442522 5.5556e-02 16 0.8756210 0.7812965 9.4325e-02 1.4718e-05 9.9999e-01 weaklyHypermeth 4.3289e-04 1.0000e+00 weaklyHypermeth 3.4923e-04 1.0000e+00 weaklyHypermeth 1.1265e-02 1.0000e+00 weaklyHypermeth 0.03680617 4.4716e-01 insignificant 1.0000e+00 insignificant 0.2287789 0.8442522 -6.0943e-01 16 0.2166950 0.7812965 -0.56460150 1.0000e+00 2.4814e-24 hypomethylated 1.0000e+00 1.2407e-22 hypomethylated 1.0000e+00 1.7698e-09 hypomethylated 1.0000000 6.8068e-08 hypomethylated -5.5077e-01 1.0766e-02 weaklyHypometh 1.4355e-01 insignificant chr19 7476650 7477650 52918 C19orf45 ENSG00000198723 0.007480 712 17 0.075571 336 16 0.031631 307 16 0.0210055 624 16 0.0198650 381 17 0.063506 797 19 0.0178231 554 19 0.0136322 381 17 0.1190341 412 15 0.058033 390 17 0.103776 367 16 0.0200963 524 18 0.00085034 296 14 0.050802 122 7 0.0685645 337 14 0.0062008 395 16 0.0419414 353 10 0.0247047 762 17 0.0178398 534 15 0.185015 448 16 0.115476 176 14 0.083040 258 13 0.051086 287 14 0.0046296 222 14 0.121825 1378 19 0.0397936 489 17 0.050337 382 15 0.029169 191 14 0.076725 496 15 0.036107 411 13 0.1260980 464 16 0.0056539 710 17 0.0390776 227 13 0.0146750 493 18 0.1071429 358 10 0.0385002 414 18 0.1347946 215 12 0.0609407 607 17 0.016270 698 19 0.0775321 694 19 0.0180573 505 16 0.0312016 906 17 0.0270699 461 19 0.012577 0.0205259 0.025396 0.0268293 0.029204 0.042636 0.0177654 0.0096558 0.023932 0.010131 0.0059096 0.014854 0.0013919 0.0138743 0.0409025 0.0051229 0.0435721 0.0173633 0.0210325 0.031185 0.053068 0.0229640 0.041645 0.0097706 0.0086011 0.0156021 0.013875 0.066608 0.019919 0.0114955 0.0211878 0.0041146 0.0210119 0.0216028 0.0290948 5.6614e-02 0.07783715 0.0311049 0.017304 0.0211603 0.021337 0.0423373 0.0373920 11 0.0230394 0.0172067 0.00695753 17 0.072678 0.086487 -0.01380855 0.14958899 9.9202e-01 insignificant 1.00000 1.000000 insignificant 0.67723161 8.9634e-01 insignificant 1.00000 1.000000 insignificant -0.01429290 0.38270904 insignificant 1.00000 insignificant 0.0228635 0.0389105 -0.01044085 17 0.064675 0.0513340 0.0133409 9.4402e-01 8.2869e-04 weaklyHypometh 1.0000e+00 6.9058e-02 weaklyHypometh 9.8240e-01 3.6111e-03 weaklyHypometh 1.0000e+00 3.6111e-01 insignificant -0.0184865 4.1208e-01 insignificant 1.0000e+00 insignificant 0.0219780 0.0287990 -0.00315882 19 0.0338047 0.0758116 -0.04200694 7.2958e-01 2.9885e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6569e-01 6.8001e-02 insignificant 1.0000e+00 1.00000000 insignificant 0.0133424 3.9834e-01 insignificant 1.0000e+00 insignificant 0.0159662 0.0389105 -0.0180611 17 0.050788 0.0513340 -0.00054548 9.9863e-01 1.3248e-05 weaklyHypometh 1.0000e+00 1.8925e-03 weaklyHypometh 9.9154e-01 5.8880e-03 weaklyHypometh 1.0000e+00 0.9813304 insignificant -0.00419361 8.5590e-01 insignificant 1.0000e+00 insignificant 0.0152602 0.0287990 -1.1574e-02 17 0.0425340 0.0758116 -3.3278e-02 9.5961e-01 1.4199e-02 weaklyHypometh 1.0000e+00 5.3341e-01 insignificant 9.8035e-01 5.3050e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02763531 1.2226e-01 insignificant 1.0000e+00 insignificant 0.0390117 0.0285014 8.3118e-03 17 0.0594393 0.0271701 0.03226923 2.1446e-01 9.8956e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.3857e-01 9.8378e-01 insignificant 1.0000000 1.0000e+00 insignificant 3.1829e-02 1.8386e-01 insignificant 1.0000e+00 insignificant chr19 7477050 7478050 52919 C19orf45 ENSG00000198723 0.094752 514 13 0.144748 273 12 0.080905 240 10 0.1799543 401 12 0.1347826 289 13 0.158819 619 15 0.0896899 437 15 0.1095652 313 13 0.0490885 337 11 0.135041 357 13 0.215508 283 12 0.0823506 470 13 0.07896825 261 10 0.333333 50 3 0.2101832 288 10 0.0078544 367 12 0.0419414 353 10 0.0444771 392 13 0.1609520 351 11 0.298465 329 12 0.247704 157 10 0.103799 204 9 0.131599 229 10 0.1076007 197 12 0.169826 708 12 0.1654122 336 13 0.181713 281 13 0.140837 163 10 0.198205 309 10 0.174002 295 9 0.2005731 365 12 0.1154751 557 15 0.1874396 184 9 0.1394217 367 14 0.1923077 366 10 0.0463439 266 12 0.2436262 135 8 0.1309630 405 13 0.104224 545 15 0.0912333 530 15 0.1271195 364 12 0.0872357 564 13 0.1354193 352 15 0.025853 0.0357296 0.030687 0.0525905 0.052093 0.064601 0.0295369 0.0233968 0.022363 0.024203 0.0251500 0.028591 0.0145373 0.0299532 0.0694880 0.0067300 0.0657917 0.0158091 0.0441007 0.053493 0.084851 0.0395270 0.057380 0.0283378 0.0292665 0.0373591 0.035585 0.103844 0.037824 0.0330564 0.0410884 0.0214340 0.0404465 0.0354607 0.0352952 8.1385e-02 0.09880707 0.0297320 0.034110 0.0316426 0.042885 0.0475133 0.0574743 7 0.0497110 0.0542677 0.00581259 13 0.171704 0.159489 0.01221454 0.18681184 9.2480e-01 insignificant 1.00000 1.000000 insignificant 0.63806469 4.6142e-01 insignificant 1.00000 1.000000 insignificant -0.02882662 0.21239743 insignificant 1.00000 insignificant 0.0497110 0.0860465 0.00097142 13 0.171704 0.1348110 0.0368931 3.4278e-01 1.7576e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.9730e-01 3.2965e-02 inconclusive 1.0000e+00 1.0000e+00 insignificant -0.0241147 4.8721e-01 insignificant 1.0000e+00 insignificant 0.0484875 0.0573980 0.00182249 15 0.1286055 0.1166476 0.01195786 4.6808e-01 9.7593e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.4275e-01 8.0249e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0235226 2.7754e-01 insignificant 1.0000e+00 insignificant 0.0541963 0.0859466 -0.0036001 13 0.150108 0.1268809 0.02322686 8.7288e-01 1.8578e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.2346e-01 1.9855e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.00471189 8.8085e-01 insignificant 1.0000e+00 insignificant 0.0527565 0.0573248 -4.1218e-03 13 0.1219895 0.1093572 1.2632e-02 7.7068e-01 8.9084e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.9675e-01 7.4320e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.05234918 4.9366e-03 weaklyHypermeth 2.4784e-01 insignificant 0.0860966 0.0573248 -7.4356e-05 13 0.1348110 0.1093572 0.02545378 5.7842e-01 9.5595e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.6505e-01 9.9699e-01 insignificant 1.0000000 1.0000e+00 insignificant 4.7637e-02 1.5319e-01 insignificant 9.3408e-01 insignificant chr19 7827450 7828450 52922 EVI5L ENSG00000142459 0.671117 749 19 0.588345 964 18 0.631308 933 23 0.6551764 791 20 0.5374240 627 22 0.609492 1333 20 0.6223409 838 22 0.6523876 741 21 0.5975544 887 23 0.615638 1035 21 0.662183 1012 20 0.5395026 601 22 0.60899242 846 22 0.583337 649 20 0.5522350 1053 24 0.6401168 355 18 0.6829865 2579 13 0.5927107 955 19 0.6651524 1153 18 0.684896 1007 18 0.625072 453 19 0.601548 399 17 0.600890 612 21 0.7135138 440 20 0.711300 242 16 0.6818465 1141 21 0.536507 858 22 0.577428 490 20 0.666861 995 21 0.650432 1094 21 0.7015559 997 21 0.5217081 1116 19 0.6117504 766 21 0.5394894 617 18 0.5623044 1071 16 0.6253589 165 15 0.5647646 594 24 0.6167100 929 18 0.550253 819 22 0.6783363 890 19 0.5076544 743 19 0.5435331 773 21 0.6537127 664 20 0.785595 0.7224459 0.740613 0.7937789 0.716956 0.781403 0.7314402 0.7849048 0.722491 0.788955 0.7676084 0.725449 0.7556651 0.8211669 0.7530735 0.7878901 0.7718153 0.7080703 0.7969865 0.773843 0.756368 0.6504892 0.771700 0.7359760 0.7926445 0.7831509 0.710139 0.776648 0.720864 0.7923402 0.7696130 0.7206912 0.7189621 0.5518271 0.7579959 7.5696e-01 0.79819001 0.6940124 0.711709 0.7482772 0.637491 0.7143852 0.7499936 18 0.7398587 0.7356569 0.00988798 19 0.576396 0.600058 -0.02366237 0.11661790 5.1963e-01 insignificant 1.00000 1.000000 insignificant 0.57032837 8.8084e-01 insignificant 1.00000 1.000000 insignificant -0.01274380 0.56292256 insignificant 1.00000 insignificant 0.7399204 0.7042492 0.03478589 18 0.590917 0.5160929 0.0748237 4.7599e-05 1.9639e-05 weaklyHypermeth 3.6335e-04 2.7470e-03 weaklyHypermeth 7.6307e-02 3.2910e-03 inconclusive 4.2869e-01 3.6111e-01 insignificant 0.0329152 9.1680e-02 insignificant 5.8769e-01 insignificant 0.7395210 0.6852661 0.05879259 19 0.5695372 0.5627064 0.00683080 3.0368e-07 7.9170e-01 weaklyHypermeth 1.1680e-05 1.0000e+00 weaklyHypermeth 3.4589e-03 8.9299e-01 weaklyHypermeth 8.0142e-02 1.00000000 weaklyHypermeth 0.0329468 3.9078e-01 insignificant 1.0000e+00 insignificant 0.7359239 0.7042492 0.0262618 19 0.622141 0.5160929 0.10604841 3.3959e-05 2.7764e-05 weaklyHypermeth 3.1155e-04 3.4705e-03 weaklyHypermeth 7.5354e-02 1.9426e-02 inconclusive 4.3307e-01 1.0000000 insignificant 0.04565897 7.5214e-02 insignificant 5.3724e-01 insignificant 0.7354352 0.6848610 4.5971e-02 19 0.5850124 0.5465103 3.8502e-02 2.5121e-03 7.9477e-01 weaklyHypermeth 4.1869e-02 1.0000e+00 weaklyHypermeth 5.3897e-02 7.4504e-01 insignificant 6.4982e-01 1.0000e+00 insignificant 0.04569063 2.7498e-01 insignificant 1.0000e+00 insignificant 0.7061393 0.6848610 3.7209e-02 18 0.5484757 0.5465103 0.00196535 3.0646e-05 4.0960e-01 weaklyHypermeth 5.1077e-03 1.0000e+00 weaklyHypermeth 6.3848e-03 7.9302e-01 weaklyHypermeth 0.6384781 1.0000e+00 insignificant 3.1661e-05 9.9934e-01 insignificant 1.0000e+00 insignificant chr19 8164650 8165650 52927 FBN3 ENSG00000142449 0.513809 226 7 0.388582 197 8 0.469400 122 9 0.5801016 183 8 0.6366137 116 9 0.568414 350 8 0.5206651 142 9 0.6650597 131 7 0.4575849 120 8 0.497885 96 6 0.465788 278 11 0.4363636 55 4 0.47190282 150 8 0.721429 28 3 0.5864230 122 6 0.5046296 84 6 0.5084511 71 6 0.5090813 140 8 0.3755076 166 8 0.592527 166 7 0.538992 61 5 0.462088 78 6 0.655414 183 7 0.5843700 78 6 0.688889 58 5 0.4425202 265 11 0.565417 66 6 0.610417 37 3 0.562265 180 8 0.496624 267 11 0.4464311 211 10 0.3663609 294 8 0.5146172 175 9 0.4397547 99 6 0.4874552 169 11 0.6507937 46 4 0.5954751 90 8 0.5455559 184 8 0.618118 219 8 0.6587430 240 10 0.6012663 185 8 0.4697847 240 6 0.5687517 222 11 0.565361 0.4718898 0.524919 0.6054354 0.686480 0.566336 0.6538604 0.6963994 0.633328 0.598289 0.6020931 0.471429 0.6127174 0.6149648 0.6662569 0.6977144 0.4935929 0.5893006 0.5413043 0.610284 0.584086 0.4867783 0.599633 0.5894713 0.6378408 0.5561483 0.680924 0.684365 0.683426 0.5524932 0.5211225 0.5438962 0.5183811 0.3969766 0.5044038 5.5980e-01 0.55769616 0.4789972 0.646165 0.6653825 0.640801 0.5739545 0.5798297 5 0.5490996 0.5669291 0.00246197 8 0.457505 0.507998 -0.05049298 0.33122849 3.7382e-01 insignificant 1.00000 1.000000 insignificant 0.48480738 7.4334e-01 insignificant 1.00000 1.000000 insignificant -0.01147141 0.73786555 insignificant 1.00000 insignificant 0.5503929 0.5058978 0.07004112 8 0.518918 0.5062605 0.0126577 9.3897e-03 2.6222e-01 weaklyHypermeth 5.3351e-02 1.0000e+00 weaklyHypermeth 7.0828e-02 3.3430e-01 insignificant 4.0473e-01 1.0000e+00 insignificant -0.0154311 6.8405e-01 insignificant 1.0000e+00 insignificant 0.5490996 0.5488246 -0.03090814 8 0.4575050 0.5947537 -0.13724869 9.2484e-01 5.8427e-03 weaklyHypometh 1.0000e+00 2.1520e-01 insignificant 8.2994e-01 6.2716e-02 insignificant 1.0000e+00 1.00000000 insignificant -0.0598219 1.5226e-01 insignificant 1.0000e+00 insignificant 0.5686829 0.5058978 0.0680262 8 0.525331 0.5062605 0.01907024 3.8969e-02 4.6966e-01 weaklyHypermeth 2.0191e-01 1.0000e+00 insignificant 1.9414e-01 4.1196e-01 insignificant 9.5518e-01 1.0000000 insignificant -0.00395969 9.2536e-01 insignificant 1.0000e+00 insignificant 0.5669291 0.5488246 -3.7831e-02 8 0.5079980 0.5947537 -8.6756e-02 7.4284e-01 3.7925e-02 weaklyHypometh 1.0000e+00 9.7204e-01 insignificant 9.8137e-01 6.1015e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04835052 2.7701e-01 insignificant 1.0000e+00 insignificant 0.5058978 0.5443733 -9.5109e-02 8 0.5062605 0.5751410 -0.06888054 1.5544e-01 1.9403e-03 weaklyHypometh 1.0000e+00 1.6872e-02 weaklyHypometh 4.0528e-01 7.8702e-02 insignificant 1.0000000 5.0733e-01 insignificant -4.4391e-02 3.4471e-01 insignificant 1.0000e+00 insignificant chr19 8337850 8338850 52932 ANGPTL4 ENSG00000167772 0.040732 186 5 0.176107 183 5 0.045829 180 5 0.0151345 238 5 0.0087719 76 5 0.028449 253 5 0.0092857 188 5 0.0420912 201 5 0.0710328 207 5 0.016310 187 5 0.030025 120 6 0.0474359 87 5 0.19180791 200 5 NA 0 0 0.0083333 131 5 0.0000000 73 5 0.0073984 218 5 0.0663988 314 6 0.0068966 77 5 0.064822 267 6 0.183824 65 5 0.083333 187 5 0.018151 189 5 0.0000000 43 5 0.132870 103 5 0.0045045 251 6 0.088889 86 5 0.000000 53 5 0.036787 152 5 0.019859 276 5 0.0060606 284 5 0.0350099 243 5 0.0864198 189 5 0.0000000 132 5 0.0000000 2 0 0.0000000 90 5 0.0000000 48 4 0.0833333 225 5 0.028699 241 5 0.0121978 243 5 0.0000000 194 5 0.0035088 245 5 0.0174122 231 5 0.051148 0.0119620 0.045871 0.0175108 0.012413 0.033545 0.0108491 0.0414575 0.018547 0.019218 0.0380480 0.048682 0.0318036 NA 0.0099057 0.0000000 0.0093189 0.0778639 0.0081327 0.010490 0.117092 0.0000000 0.021322 0.0000000 0.0894130 0.0053544 0.041509 0.000000 0.042432 0.0231561 0.0085763 0.0415915 0.0034941 0.0000000 NA 0.0000e+00 0.00000000 0.0000000 0.033244 0.0115074 0.000000 0.0049652 0.0177380 5 0.0292380 0.0258799 0.00421947 5 0.046720 0.049478 -0.00275742 0.27187776 7.3998e-01 insignificant 1.00000 1.000000 insignificant 0.32800608 7.1685e-01 insignificant 1.00000 1.000000 insignificant -0.00462349 0.82825042 lowCoverage 1.00000 lowCoverage 0.0292380 0.0043732 0.02491895 5 0.046720 0.0425302 0.0041902 1.9681e-03 9.8961e-01 weaklyHypermeth 1.2536e-02 1.0000e+00 weaklyHypermeth 7.5065e-04 9.8956e-01 weaklyHypermeth 7.2879e-03 1.0000e+00 weaklyHypermeth 0.0178584 4.2918e-01 lowCoverage 1.0000e+00 lowCoverage 0.0292380 0.0103986 0.01627379 5 0.0467204 0.0137509 0.03296958 7.5892e-02 9.8345e-01 insignificant 6.7761e-01 1.0000e+00 insignificant 1.0603e-01 9.8947e-01 insignificant 1.0000e+00 1.00000000 insignificant 0.0337870 1.8509e-02 lowCoverage 3.0343e-01 lowCoverage 0.0258799 0.0043732 0.0198595 5 0.049478 0.0425302 0.00694764 2.4045e-02 9.8793e-01 weaklyHypermeth 1.3139e-01 1.0000e+00 insignificant 8.2665e-03 9.8985e-01 weaklyHypermeth 6.5091e-02 1.0000000 weaklyHypermeth 0.02248186 3.8028e-01 lowCoverage 1.0000e+00 lowCoverage 0.0258799 0.0103986 1.1316e-02 5 0.0494779 0.0137509 3.5727e-02 1.3455e-01 9.8614e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.0009e-01 9.7619e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03841044 5.1414e-02 insignificant 8.2926e-01 insignificant 0.0043732 0.0103986 -8.7103e-03 5 0.0425302 0.0137509 0.02877937 8.7707e-01 2.3690e-02 weaklyHypometh 1.0000e+00 1.4993e-01 insignificant 9.4719e-01 7.0166e-02 insignificant 1.0000000 4.7410e-01 insignificant 1.5929e-02 4.2609e-01 lowCoverage 1.0000e+00 lowCoverage chr19 8990350 8991350 52942 MUC16 ENSG00000181143 0.743819 526 18 0.705710 269 17 0.675969 233 18 0.7631386 359 18 0.6999005 189 16 0.779546 510 17 0.5924380 169 10 0.7284295 242 15 0.5902636 168 16 0.683461 188 14 0.745029 506 18 0.5482843 94 5 0.60887522 314 16 0.725389 163 16 0.6236606 181 15 0.5104776 77 3 0.7250000 40 3 0.8178307 372 16 0.7955304 208 14 0.756334 280 15 0.728042 101 9 0.789322 149 14 0.759589 278 12 0.6381486 164 15 0.721943 138 14 0.8089645 279 17 0.737975 162 13 0.733125 59 3 0.757154 197 16 0.738184 392 15 0.7110078 299 16 0.6421962 379 15 0.6430814 256 17 0.6584028 165 13 0.5969593 225 10 0.5406250 45 2 0.5429438 214 17 0.6896138 287 15 0.737232 321 13 0.7645431 460 18 0.7594815 341 17 0.7978230 272 14 0.8161961 384 17 0.753045 0.7103606 0.644103 0.8125336 0.632932 0.801682 0.6112555 0.7604185 0.569291 0.594219 0.7677420 0.567541 0.6053839 0.6120644 0.6085969 0.5554501 0.6352882 0.7756331 0.8092886 0.791090 0.773564 0.8265292 0.725521 0.6918290 0.7370299 0.8354285 0.727845 0.740219 0.716250 0.7343228 0.7786313 0.7440438 0.6038328 0.6314663 0.6974978 5.1082e-01 0.61962568 0.7619122 0.739209 0.8197871 0.793069 0.8353721 0.8108145 4 0.7313668 0.7477859 -0.02993655 17 0.674691 0.718284 -0.04359290 0.85124406 2.0431e-01 insignificant 1.00000 1.000000 insignificant 0.98750453 1.2898e-01 insignificant 1.00000 1.000000 insignificant -0.03951670 0.11041010 insignificant 1.00000 insignificant 0.7313668 0.6325503 0.05094914 15 0.674691 0.5901565 0.0845342 6.5953e-09 9.9705e-01 weaklyHypermeth 6.7299e-08 1.0000e+00 weaklyHypermeth 1.5252e-03 9.9597e-01 weaklyHypermeth 1.2925e-02 1.0000e+00 weaklyHypermeth 0.0790165 2.9360e-02 weaklyHypermeth 2.4882e-01 insignificant 0.7317457 0.7322835 -0.06996018 16 0.7171598 0.7852793 -0.06811955 9.9746e-01 1.1443e-02 weaklyHypometh 1.0000e+00 3.2694e-01 insignificant 9.9966e-01 1.0621e-02 weaklyHypometh 1.0000e+00 0.44252854 insignificant -0.0841010 2.2164e-03 weaklyHypometh 9.2348e-02 weaklyHypometh 0.7477859 0.6325503 0.0917936 15 0.718284 0.5901565 0.12812710 1.1292e-09 9.9947e-01 weaklyHypermeth 1.4293e-08 1.0000e+00 weaklyHypermeth 1.0951e-04 9.9985e-01 weaklyHypermeth 1.2883e-03 1.0000000 weaklyHypermeth 0.11853324 3.2598e-03 weaklyHypermeth 4.1792e-02 weaklyHypermeth 0.7482625 0.7322835 -3.6977e-02 16 0.7317786 0.7852793 -5.3501e-02 9.8904e-01 6.0658e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9215e-01 2.4964e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04458426 4.8410e-02 weaklyHypometh 8.2926e-01 insignificant 0.6336134 0.7322835 -1.2731e-01 14 0.6491721 0.7852793 -0.13610718 9.9996e-01 3.4125e-08 weaklyHypometh 1.0000e+00 6.6911e-07 weaklyHypometh 9.9993e-01 1.5634e-05 weaklyHypometh 1.0000000 3.8133e-04 weaklyHypometh -1.6312e-01 5.7570e-04 weaklyHypometh 1.5560e-02 weaklyHypometh chr19 9027150 9028150 52944 MUC16 ENSG00000181143 0.772925 115 4 0.788915 144 5 0.810000 76 5 0.5067937 145 4 0.7921245 53 5 0.747320 106 4 0.7969058 102 5 0.8423932 75 5 0.7908469 58 5 0.695789 65 4 0.756384 182 5 0.8846154 42 4 0.83365385 78 5 0.950000 20 2 0.7653333 75 5 0.6605556 34 3 0.8500000 30 4 0.7273810 112 4 0.8790936 107 5 0.714960 100 4 0.777839 51 4 0.730556 34 3 0.755473 77 4 0.7107143 37 4 0.528611 50 2 0.8728675 81 5 0.750000 42 3 0.841758 35 4 0.804967 106 5 0.793862 123 5 0.7818182 88 5 0.7080145 125 5 0.7725472 162 5 0.7276463 93 5 0.7562101 125 5 0.5416667 20 2 0.7245357 80 5 0.7903643 117 5 0.730488 93 4 0.7097802 83 4 0.7337179 86 2 0.7043887 70 4 0.7098928 75 4 0.764099 0.8015331 0.820417 0.7067249 0.822672 0.746880 0.7976114 0.8588889 0.797048 0.657149 0.7452102 0.858379 0.8358574 0.8319275 0.8078889 0.7804861 0.8423286 0.7894841 0.8797819 0.714982 0.792788 0.8013889 0.763706 0.6421131 0.6236944 0.8762405 0.759028 0.826740 0.789695 0.8051740 0.8150000 0.7107932 0.7801455 0.7249341 0.7504598 6.6806e-01 0.68208700 0.7689385 0.728637 0.7265339 0.724781 0.7104493 0.7625390 1 0.7888307 0.7726737 0.02106823 5 0.786887 0.767918 0.01896895 0.27595476 8.6067e-01 insignificant 1.00000 1.000000 insignificant 0.53013149 6.7047e-01 insignificant 1.00000 1.000000 insignificant 0.02359288 0.47706319 lowCoverage 1.00000 lowCoverage 0.7888307 0.7520938 0.03965584 5 0.786887 0.7563002 0.0305863 2.8518e-02 9.2101e-01 weaklyHypermeth 1.3711e-01 1.0000e+00 insignificant 7.5143e-02 9.4126e-01 insignificant 4.2453e-01 1.0000e+00 insignificant 0.0594712 1.9684e-01 lowCoverage 1.0000e+00 lowCoverage 0.7888307 0.7616708 0.04629756 4 0.7868866 0.7295611 0.05732544 1.7440e-02 7.9732e-01 lowCoverage 2.0517e-01 1.0000e+00 lowCoverage 7.9713e-02 6.0398e-01 lowCoverage 8.0519e-01 1.00000000 lowCoverage 0.0606460 1.1158e-02 lowCoverage 2.4797e-01 lowCoverage 0.7726737 0.7520938 0.0179779 5 0.767918 0.7563002 0.01161738 1.8180e-01 8.5371e-01 insignificant 8.0802e-01 1.0000e+00 insignificant 1.3618e-01 9.4451e-01 insignificant 7.1300e-01 1.0000000 insignificant 0.03587829 4.4045e-01 lowCoverage 1.0000e+00 lowCoverage 0.7726737 0.7616708 2.6098e-02 4 0.7679176 0.7295611 3.8356e-02 2.2277e-01 3.1785e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 2.3247e-01 7.4570e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.03705316 1.7521e-01 lowCoverage 1.0000e+00 lowCoverage 0.7520938 0.7616708 -9.2157e-03 4 0.7563002 0.7295611 0.02673911 2.0600e-01 1.1796e-01 lowCoverage 1.0000e+00 6.0286e-01 lowCoverage 5.6298e-01 2.3279e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage 1.1749e-03 9.7610e-01 lowCoverage 1.0000e+00 lowCoverage chr19 9043250 9044250 52945 MUC16 ENSG00000181143 0.568705 126 6 0.532517 99 6 0.500000 22 4 0.6052294 90 6 0.5825499 62 6 0.535402 47 4 0.7196970 31 2 0.5071734 50 6 0.6083333 27 3 0.500000 36 6 0.571953 155 6 0.8333333 8 0 0.67460317 40 6 0.733333 14 2 0.5551282 62 6 0.3333333 14 0 0.7500000 4 0 0.6262021 108 5 0.6153846 57 6 0.468750 33 4 1.000000 2 0 0.833333 6 0 0.607143 37 2 0.3422619 24 2 0.400000 33 2 0.6091270 80 6 0.509524 16 2 0.750000 8 0 0.517094 53 6 0.631576 100 6 0.5962590 111 6 0.6771429 59 4 0.5356806 83 6 0.4829060 50 6 0.4293981 82 6 0.5666667 22 4 0.5834758 56 6 0.5145878 119 6 0.696970 67 6 0.5634034 111 6 0.5246032 86 6 0.7272727 34 2 0.5428241 70 6 0.651894 0.6048452 0.500000 0.6375795 0.680067 0.646991 0.8279221 0.5561879 0.717857 0.595238 0.6475718 0.928571 0.7176871 0.7142857 0.6664835 0.1428571 0.6885305 0.6369338 0.7472527 0.627948 0.846251 0.7272031 0.729592 0.4477041 0.6223886 0.7134354 0.705155 0.667679 0.536630 0.6054705 0.6589009 0.7019752 0.6423925 0.5586081 0.4379960 6.4399e-01 0.74236874 0.6381200 0.792208 0.6621249 0.576531 0.7012987 0.6076389 0 0.5870968 0.6068053 -0.01892308 6 0.635092 0.605018 0.03007491 0.89370491 3.7772e-01 insignificant 1.00000 1.000000 insignificant 0.47034461 6.4077e-01 insignificant 1.00000 1.000000 insignificant -0.03170694 0.59199775 lowCoverage 1.00000 lowCoverage 0.5867159 0.5145631 0.05400396 6 0.574275 0.5182116 0.0560630 1.7169e-02 9.4066e-01 weaklyHypermeth 8.7599e-02 1.0000e+00 weaklyHypermeth 1.6091e-02 9.4733e-01 weaklyHypermeth 1.0946e-01 1.0000e+00 insignificant 0.0722956 4.9755e-02 lowCoverage 3.7410e-01 lowCoverage 0.5867159 0.6059783 -0.00721595 6 0.5742746 0.5833785 -0.00910397 6.5805e-01 2.4393e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.1840e-01 5.1807e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0199332 6.9622e-01 lowCoverage 1.0000e+00 lowCoverage 0.6064639 0.5145631 0.0730347 6 0.594743 0.5182116 0.07653113 1.8219e-02 9.9529e-01 weaklyHypermeth 1.0351e-01 1.0000e+00 insignificant 1.9559e-01 9.7703e-01 insignificant 9.5518e-01 1.0000000 insignificant 0.10400257 8.9072e-02 lowCoverage 6.1429e-01 lowCoverage 0.6064639 0.6059783 1.1476e-02 6 0.5947427 0.5833785 1.1364e-02 4.9764e-01 6.2093e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.8309e-01 3.1341e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01177379 8.6301e-01 lowCoverage 1.0000e+00 lowCoverage 0.5145631 0.6059783 -6.6213e-02 6 0.5182116 0.5833785 -0.06516694 7.8334e-01 9.0868e-03 weaklyHypometh 1.0000e+00 6.6327e-02 weaklyHypometh 9.2042e-01 7.9143e-02 insignificant 1.0000000 5.0733e-01 insignificant -9.2229e-02 1.0028e-01 insignificant 6.8219e-01 insignificant chr19 10276550 10277550 52952 ICAM5 ENSG00000105376 0.844720 94 4 0.797833 157 7 0.851786 77 8 0.9891807 147 4 0.8856647 72 8 0.884854 233 6 0.7243590 85 7 0.8988095 98 8 0.8850694 83 8 0.911630 74 6 0.932438 180 8 0.9635417 43 5 0.94280303 72 6 0.962963 40 4 0.9031250 77 6 0.9875000 53 5 0.7500000 12 1 0.6935608 89 4 0.9433304 151 5 0.833519 110 4 0.839782 58 8 0.877964 89 4 0.849583 123 7 0.9687500 28 0 0.880164 338 6 0.9691254 180 8 0.789255 66 6 0.821429 14 1 0.872024 70 5 0.940648 308 7 0.9364478 184 8 0.8721065 126 5 0.7193182 124 8 0.9389535 218 8 0.8365917 375 8 0.7813492 118 6 0.8639798 75 7 0.7873254 229 8 0.954545 96 4 0.8835165 66 6 0.9253813 75 4 0.9191176 71 4 0.7237538 95 5 0.949534 0.8973743 0.924745 0.9790516 1.000000 0.931553 0.9347527 0.9593254 0.858135 0.944139 0.9274393 0.969494 0.9778139 0.9457672 0.9027778 1.0000000 NA 0.8837418 0.9752175 0.919554 0.794359 0.8792665 0.897044 1.0000000 0.8436050 0.9671591 0.934393 0.997855 0.913690 0.9696855 0.9433833 0.9605655 0.7242063 0.8809524 0.9960637 6.8182e-01 0.82651872 0.7441461 0.912338 0.8511905 0.891068 0.8822654 0.8819071 4 0.9211340 0.9116162 0.01323893 5 0.848890 0.799272 0.04961829 0.13471916 6.1379e-01 insignificant 1.00000 1.000000 insignificant 0.37451307 7.6125e-01 insignificant 1.00000 1.000000 insignificant -0.00543888 0.83106565 insignificant 1.00000 insignificant 0.9211340 0.8577700 0.07066187 5 0.848890 0.7548603 0.0940296 1.3318e-02 7.8328e-01 weaklyHypermeth 7.1990e-02 1.0000e+00 weaklyHypermeth 6.0693e-02 9.7946e-01 insignificant 3.5493e-01 1.0000e+00 insignificant 0.0580814 1.4520e-01 insignificant 8.3928e-01 insignificant 0.9211340 0.8883375 0.04504291 4 0.8488899 0.8054085 0.04348140 9.7024e-04 1.4533e-01 lowCoverage 1.6171e-02 1.0000e+00 lowCoverage 2.3401e-02 4.1516e-01 lowCoverage 3.3915e-01 1.00000000 lowCoverage -0.0019286 9.6735e-01 lowCoverage 1.0000e+00 lowCoverage 0.9116162 0.8577700 0.0573963 7 0.799272 0.7548603 0.04441131 1.6400e-01 9.0548e-01 insignificant 7.3543e-01 1.0000e+00 insignificant 1.8180e-01 9.5855e-01 insignificant 9.0901e-01 1.0000000 insignificant 0.06352027 1.0977e-01 insignificant 7.0805e-01 insignificant 0.9116162 0.8883375 2.5966e-02 4 0.7992716 0.8054085 -6.1369e-03 4.2641e-01 2.4015e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 2.8812e-01 3.1743e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.00351030 9.3961e-01 lowCoverage 1.0000e+00 lowCoverage 0.8577700 0.8883375 -3.5260e-02 4 0.7548603 0.8054085 -0.05054820 9.1267e-01 1.7985e-01 lowCoverage 1.0000e+00 8.7732e-01 lowCoverage 9.8436e-01 2.4449e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage -6.0010e-02 2.7760e-01 lowCoverage 1.0000e+00 lowCoverage chr19 10631050 10632050 52957 ILF3 ENSG00000129351 0.752054 403 13 0.740746 259 11 0.645353 222 13 0.7768556 331 13 0.6204413 124 7 0.665299 439 13 0.6245926 186 7 0.7719072 221 11 0.7336996 146 11 0.733685 176 12 0.810125 406 13 0.5395695 129 8 0.75988034 191 8 0.848693 100 6 0.5285168 187 9 0.6621691 125 8 0.6460550 286 12 0.7407835 326 13 0.7385337 192 11 0.810623 362 13 0.635665 67 7 0.673836 121 7 0.711245 235 13 0.6734661 107 7 0.841667 59 6 0.8000337 294 13 0.609762 164 8 0.505093 78 7 0.767382 138 8 0.720335 292 13 0.6875288 266 13 0.7324446 494 13 0.7510989 190 13 0.6520112 147 13 0.7125939 291 13 0.7300000 37 1 0.8351656 168 7 0.7355427 260 13 0.878108 311 12 0.7749596 369 13 0.8479865 305 12 0.8146468 210 12 0.7853790 369 13 0.823775 0.8266449 0.730882 0.8844308 0.776632 0.857552 0.7903060 0.8322093 0.774331 0.827372 0.8562652 0.784873 0.8289316 0.8833749 0.7854060 0.8045243 0.7861113 0.8615468 0.8581927 0.877255 0.811278 0.8483710 0.860084 0.7884299 0.9262346 0.9186012 0.820160 0.787817 0.835420 0.8842113 0.8388548 0.8272858 0.8750769 0.8048808 0.8368113 8.4882e-01 0.87664942 0.8652522 0.916121 0.8662381 0.910011 0.9056404 0.8906366 5 0.7734359 0.7727862 -0.01341615 13 0.724029 0.709531 0.01449744 0.45644861 2.4167e-01 insignificant 1.00000 1.000000 insignificant 0.73040586 2.0895e-01 insignificant 1.00000 1.000000 insignificant 0.01094097 0.73854384 insignificant 1.00000 insignificant 0.7734359 0.7712717 -0.01826949 13 0.724029 0.7162789 0.0077498 3.7384e-01 1.2512e-02 weaklyHypometh 1.0000e+00 5.0049e-01 insignificant 9.1273e-01 5.5437e-03 weaklyHypometh 1.0000e+00 4.2644e-01 insignificant -0.0285896 3.7706e-01 insignificant 1.0000e+00 insignificant 0.7734359 0.8484655 -0.06329298 13 0.7240287 0.8546816 -0.13065295 1.0000e+00 1.3445e-03 weaklyHypometh 1.0000e+00 7.4697e-02 weaklyHypometh 1.0000e+00 1.3201e-04 weaklyHypometh 1.0000e+00 0.01885879 weaklyHypometh -0.1127369 1.1486e-03 weaklyHypometh 6.4842e-02 weaklyHypometh 0.7727862 0.7712717 -0.0075127 13 0.709531 0.7162789 -0.00674767 3.0841e-01 2.0148e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.4622e-01 1.0924e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.03953058 2.8296e-01 insignificant 1.0000e+00 insignificant 0.7727862 0.8484655 -5.5132e-02 13 0.7095312 0.8546816 -1.4515e-01 1.0000e+00 6.3837e-03 weaklyHypometh 1.0000e+00 3.5583e-01 insignificant 9.9999e-01 1.5482e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.12367784 1.7161e-03 weaklyHypometh 1.3218e-01 insignificant 0.7712717 0.8484655 -4.5982e-02 13 0.7162789 0.8546816 -0.13840272 8.1225e-01 1.3738e-02 weaklyHypometh 1.0000e+00 9.4743e-02 weaklyHypometh 8.9101e-01 2.3984e-01 insignificant 1.0000000 1.0000e+00 insignificant -8.4147e-02 2.4101e-02 weaklyHypometh 2.4101e-01 insignificant chr19 10706750 10707750 52958 MIR638 ENSG00000207972 0.821042 337 8 0.770674 246 8 0.719523 152 7 0.8671131 174 8 0.7288758 89 7 0.807752 435 8 0.7564862 115 7 0.8386364 153 7 0.8559611 145 8 0.862742 133 8 0.829890 285 8 0.7582867 94 6 0.78953430 175 8 0.916667 12 1 0.8276926 184 8 0.6901568 110 6 0.6805556 101 6 0.8628807 158 7 0.7231571 168 8 0.757630 317 8 0.915475 92 6 0.908401 88 8 0.805740 164 8 0.7368056 86 6 0.878636 73 7 0.8193945 303 8 0.732738 71 6 0.785606 58 7 0.836120 184 6 0.855942 327 8 0.7785485 320 8 0.8340361 449 8 0.7720416 196 8 0.8282727 151 7 0.5352270 282 7 0.8165966 60 6 0.7532242 94 7 0.7879557 273 8 0.881679 301 7 0.7787238 352 7 0.8241717 199 7 0.8426179 295 7 0.9084546 281 7 0.845211 0.8064419 0.795356 0.9046196 0.733334 0.809489 0.8357454 0.8703557 0.864608 0.859354 0.8557928 0.808846 0.8679645 0.8599261 0.8375854 0.6976188 0.7964446 0.9038995 0.8009917 0.781191 0.938145 0.8847550 0.816410 0.8193438 0.8578239 0.8464215 0.786777 0.836814 0.868398 0.8372645 0.7985749 0.8381229 0.7789393 0.8136011 0.5357794 8.2988e-01 0.77163130 0.8028128 0.874928 0.8627229 0.805632 0.8559942 0.9067381 4 0.8219369 0.8338600 -0.00832529 8 0.807449 0.825340 -0.01789118 0.95208511 2.2539e-01 insignificant 1.00000 1.000000 insignificant 0.74569143 2.8175e-01 insignificant 1.00000 1.000000 insignificant -0.03069079 0.18863411 insignificant 1.00000 insignificant 0.8219369 0.7291667 0.09307688 8 0.807449 0.7531516 0.0542975 9.5717e-05 9.6816e-01 weaklyHypermeth 7.0380e-04 1.0000e+00 weaklyHypermeth 1.0695e-03 8.9460e-01 weaklyHypermeth 9.6350e-03 1.0000e+00 weaklyHypermeth 0.0443765 3.7671e-01 insignificant 1.0000e+00 insignificant 0.8219369 0.8564426 -0.03604283 7 0.8074491 0.8446752 -0.03722611 9.7513e-01 1.1563e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.9768e-01 1.5608e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0538667 8.1282e-02 insignificant 8.4178e-01 insignificant 0.8338600 0.7291667 0.1030532 8 0.825340 0.7531516 0.07218868 7.8969e-06 9.8974e-01 weaklyHypermeth 7.4499e-05 1.0000e+00 weaklyHypermeth 1.4826e-03 9.6004e-01 weaklyHypermeth 1.3357e-02 1.0000000 weaklyHypermeth 0.07506727 1.6054e-01 insignificant 9.3339e-01 insignificant 0.8338600 0.8564426 -2.4394e-02 7 0.8253403 0.8446752 -1.9335e-02 9.1247e-01 9.8225e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6471e-01 9.9522e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02317590 4.3623e-01 insignificant 1.0000e+00 insignificant 0.7291667 0.8564426 -1.3450e-01 7 0.7531516 0.8446752 -0.09152361 9.9548e-01 2.5071e-05 weaklyHypometh 1.0000e+00 3.0575e-04 weaklyHypometh 9.9988e-01 1.2664e-04 weaklyHypometh 1.0000000 2.3026e-03 weaklyHypometh -9.8243e-02 8.6425e-02 insignificant 6.1623e-01 insignificant chr19 10788650 10789650 52966 MIR199A1 ENSG00000207752 0.852020 444 18 0.648421 438 21 0.667111 229 19 0.9671202 423 16 0.6876543 150 12 0.711994 604 20 0.6723392 121 11 0.7906457 565 21 0.6777275 200 19 0.691811 348 20 0.896280 812 28 0.5143229 58 5 0.93814210 674 21 0.758814 314 17 0.7546724 348 19 0.2442857 90 9 0.2809524 34 1 0.5542107 896 19 0.8678671 632 21 0.863915 465 21 0.577334 345 18 0.792580 387 18 0.832825 222 15 0.6033712 238 13 0.600262 321 14 0.7944378 621 21 0.858450 522 18 0.559110 116 7 0.676201 506 21 0.849438 649 20 0.9152192 542 19 0.9301583 603 20 0.0035718 656 29 0.0179416 560 26 0.1325281 747 21 0.0571429 149 12 0.0720857 747 21 0.0416667 914 21 0.657529 316 14 0.7920507 489 18 0.7393701 347 8 0.5319336 575 15 0.7367545 309 19 0.880099 0.7086482 0.843532 0.9459802 0.910000 0.900814 0.7585667 0.9130477 0.861177 0.890868 0.9254247 0.716836 0.9353090 0.8814616 0.7981067 0.5462145 NA 0.6205051 0.9207680 0.945699 0.836210 0.8522226 0.886907 0.8863939 0.7882025 0.8854985 0.834239 0.915935 0.907331 0.9253668 0.9410856 0.9392395 0.0067898 0.0210968 0.1253899 5.0769e-02 0.01486094 0.0093590 0.887080 0.8118293 0.849109 0.7044469 0.8139221 4 0.8312715 0.8708596 -0.04622037 21 0.728960 0.685828 0.04313224 0.90971960 1.5057e-02 weaklyHypometh 1.00000 0.612844 insignificant 0.77287147 2.7607e-01 insignificant 1.00000 1.000000 insignificant -0.04710029 0.42749784 insignificant 1.00000 insignificant 0.8312069 0.0148423 0.81285391 21 0.706373 0.0771873 0.6291860 1.4255e-184 1.0000e+00 hypermethylated 7.1274e-182 1.0000e+00 hypermethylated 1.0481e-44 1.0000e+00 hypermethylated 5.2405e-42 1.0000e+00 hypermethylated 0.6478592 8.2321e-13 hypermethylated 8.2321e-11 hypermethylated 0.8309733 0.8050098 0.06602283 17 0.6782731 0.5472615 0.13101159 4.1278e-04 9.9740e-01 weaklyHypermeth 7.2552e-03 1.0000e+00 weaklyHypermeth 4.9305e-03 9.7674e-01 weaklyHypermeth 9.8609e-02 1.00000000 weaklyHypermeth 0.0104877 8.6944e-01 insignificant 1.0000e+00 insignificant 0.8709805 0.0148423 0.8544865 21 0.687424 0.0771873 0.61023716 1.3389e-207 1.0000e+00 hypermethylated 6.6946e-205 1.0000e+00 hypermethylated 2.9739e-42 1.0000e+00 hypermethylated 1.4869e-39 1.0000000 hypermethylated 0.69495946 1.0627e-10 hypermethylated 1.5181e-08 hypermethylated 0.8709550 0.8053097 1.0735e-01 17 0.6784937 0.5499622 1.2853e-01 1.8590e-08 9.9893e-01 weaklyHypermeth 1.0328e-06 1.0000e+00 weaklyHypermeth 8.7368e-04 9.8505e-01 weaklyHypermeth 2.5696e-02 1.0000e+00 weaklyHypermeth 0.05758798 3.6087e-01 insignificant 1.0000e+00 insignificant 0.0148502 0.8053097 -7.6274e-01 17 0.0793927 0.5499622 -0.47056952 1.0000e+00 1.5715e-94 hypomethylated 1.0000e+00 7.8573e-92 hypomethylated 1.0000e+00 3.0918e-22 hypomethylated 1.0000000 1.5459e-19 hypomethylated -6.3737e-01 2.9628e-05 hypomethylated 2.1163e-03 hypomethylated chr19 11115650 11116650 52977 LDLR ENSG00000130164 0.835875 161 6 0.678985 149 6 0.436968 52 4 0.7990688 171 6 0.6751984 83 6 0.769976 314 6 0.5579792 77 6 0.8685548 165 6 0.7148504 74 6 0.672840 60 6 0.755839 297 6 0.7291667 26 2 0.80304336 144 6 0.627922 64 6 0.8463868 80 6 0.3571429 14 0 0.6250000 9 0 0.7387951 132 6 0.8821325 231 6 0.854864 228 6 0.949425 49 2 0.581429 23 3 0.732462 105 6 0.5518926 44 4 0.557823 49 5 0.8565095 233 6 0.554324 92 5 0.493421 40 2 0.662276 163 6 0.858876 204 6 0.7909913 192 6 0.5959292 315 6 0.6973685 175 6 0.8894970 122 6 0.7196590 179 6 0.6481481 22 0 0.5723611 130 6 0.7680728 240 6 0.814006 102 6 0.7473491 205 6 0.8031727 143 6 0.8005952 85 6 0.6785185 141 7 0.819715 0.6847005 0.487054 0.8194567 0.753052 0.804562 0.7458857 0.8067478 0.663442 0.844646 0.8515498 0.818182 0.8752950 0.8595041 0.8566815 0.4181818 0.7501245 0.8710696 0.8773685 0.788444 0.870569 0.5114706 0.746833 0.7636475 0.7744589 0.8104434 0.733242 0.791029 0.803455 0.8243162 0.7830850 0.8447348 0.8208730 0.8857536 0.7043475 7.5758e-01 0.73045455 0.7836441 0.780154 0.8023827 0.793562 0.8314755 0.8056566 1 0.8246239 0.8346614 0.00349941 6 0.706883 0.673581 0.03330221 0.95316506 8.3320e-01 insignificant 1.00000 1.000000 insignificant 0.60143348 9.3316e-01 insignificant 1.00000 1.000000 insignificant 0.02941617 0.58880057 lowCoverage 1.00000 lowCoverage 0.8246239 0.8306452 0.01417114 6 0.706883 0.6425548 0.0643281 2.8652e-01 9.5331e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.3534e-01 8.8305e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0043217 9.3784e-01 insignificant 1.0000e+00 insignificant 0.8248811 0.8038633 0.00176457 6 0.7711449 0.8039615 -0.03281661 8.0842e-01 8.3319e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.5888e-01 8.4162e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0571989 1.7382e-01 insignificant 1.0000e+00 insignificant 0.8352159 0.8321759 0.0086739 6 0.734815 0.6555143 0.07930094 2.3601e-01 9.1589e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.4027e-01 5.9656e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.03373791 5.9492e-01 lowCoverage 1.0000e+00 lowCoverage 0.8352159 0.8000000 -3.4895e-03 6 0.6742092 0.7130524 -3.8843e-02 4.0128e-01 8.3173e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.7239e-01 4.6052e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.08661507 1.0594e-01 lowCoverage 1.0000e+00 lowCoverage 0.8333333 0.8029851 -1.6360e-02 6 0.7210657 0.7843577 -0.06329195 8.8142e-01 4.0166e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4465e-01 7.3267e-01 insignificant 1.0000000 1.0000e+00 insignificant -5.2877e-02 3.2993e-01 insignificant 1.0000e+00 insignificant chr19 11295450 11296450 52981 TSPAN16 ENSG00000130167 0.897261 349 6 0.786220 405 6 0.820221 279 6 0.8483641 386 6 0.8127561 208 6 0.877829 510 6 0.8327709 254 6 0.8812868 285 6 0.9159360 277 5 0.880763 172 5 0.898582 305 6 0.8343615 66 5 0.93763965 283 5 0.931889 132 6 0.8776913 231 5 0.9075630 74 5 0.6842593 27 3 0.7278243 415 5 0.9136988 242 5 0.881262 417 6 0.837037 130 5 0.925868 74 3 0.853366 324 6 0.8076389 101 5 0.946667 45 3 0.9058731 463 6 0.777095 244 6 0.901818 92 5 0.923738 280 6 0.938505 563 6 0.9130869 527 6 0.8844177 405 6 0.2932645 315 6 0.2441075 298 5 0.5000000 218 4 0.4057239 28 3 0.3747203 210 6 0.1837951 439 6 0.847752 374 6 0.7181667 301 6 0.8226498 277 5 0.7694912 363 5 0.7448674 339 5 0.870216 0.8077825 0.783448 0.8549546 0.815493 0.861316 0.8230984 0.8810670 0.900022 0.881604 0.8891811 0.805907 0.9264110 0.9079318 0.8945178 0.8810684 0.7467110 0.6500208 0.8957254 0.886108 0.799197 0.9337785 0.839245 0.7759535 0.9513800 0.8979165 0.773000 0.904488 0.903674 0.9281850 0.9179398 0.8604677 0.2452667 0.2506977 0.4575637 2.2127e-01 0.38808873 0.2023616 0.840341 0.6258365 0.767984 0.7454628 0.6564030 5 0.8463130 0.8823892 -0.03633611 6 0.856169 0.888115 -0.03194578 0.96610918 2.5549e-02 weaklyHypometh 1.00000 0.786213 insignificant 0.94074583 7.9205e-02 insignificant 1.00000 1.000000 insignificant -0.02718361 0.21763826 insignificant 1.00000 insignificant 0.8463130 0.2301061 0.60092204 6 0.856169 0.3067569 0.5494124 1.1357e-39 1.0000e+00 hypermethylated 3.3402e-38 1.0000e+00 hypermethylated 2.4837e-10 1.0000e+00 hypermethylated 5.9135e-09 1.0000e+00 hypermethylated 0.5238071 4.0575e-05 hypermethylated 9.4360e-04 hypermethylated 0.8463130 0.7315599 0.13128089 6 0.8561694 0.7800230 0.07614639 2.3145e-04 1.1264e-01 weaklyHypermeth 4.6291e-03 1.0000e+00 weaklyHypermeth 1.3883e-03 1.1374e-01 weaklyHypermeth 3.5597e-02 1.00000000 weaklyHypermeth 0.0768236 2.8319e-02 weaklyHypermeth 4.0455e-01 insignificant 0.8823892 0.2301061 0.6527194 6 0.888115 0.3067569 0.58135820 1.4691e-36 1.0000e+00 hypermethylated 5.8764e-35 1.0000e+00 hypermethylated 3.8697e-09 1.0000e+00 hypermethylated 9.9224e-08 1.0000000 hypermethylated 0.55099068 2.7686e-05 hypermethylated 6.9216e-04 hypermethylated 0.8823892 0.7315599 1.8081e-01 6 0.8881151 0.7800230 1.0809e-01 1.5786e-06 5.2843e-01 weaklyHypermeth 6.0714e-05 1.0000e+00 weaklyHypermeth 8.4288e-03 4.8692e-01 weaklyHypermeth 1.6209e-01 1.0000e+00 insignificant 0.10400719 7.3469e-03 weaklyHypermeth 3.0612e-01 insignificant 0.2301061 0.7315599 -4.5441e-01 6 0.3067569 0.7800230 -0.47326603 1.0000e+00 3.8955e-12 hypomethylated 1.0000e+00 9.9884e-11 hypomethylated 1.0000e+00 2.1895e-06 hypomethylated 1.0000000 5.9175e-05 hypomethylated -4.4698e-01 4.9675e-05 hypomethylated 3.1906e-03 hypomethylated chr19 11570950 11571950 52987 ZNF627 ENSG00000198551 0.833142 131 6 0.647619 74 6 1.000000 6 0 0.7712644 132 6 0.5833333 10 0 0.795414 200 6 0.9333333 13 1 0.5555556 30 3 1.0000000 21 3 0.566667 29 3 0.810821 140 6 0.4000000 17 2 0.94444444 57 3 NA 0 0 0.9250000 35 3 0.0000000 1 0 0.7500000 10 0 0.8764548 180 6 0.7772690 96 6 0.779187 143 6 0.800595 44 3 0.878540 58 3 0.798148 72 6 0.6963869 39 3 0.989583 54 3 0.7549137 170 6 0.961806 54 3 0.833333 6 0 0.701035 80 3 0.788360 98 6 0.8656703 120 6 0.7663043 220 6 0.7435631 66 3 0.9841270 62 3 0.4889706 55 3 1.0000000 21 3 0.7962963 30 3 0.7790643 126 6 0.807672 68 6 0.8301080 139 6 0.7861905 118 6 0.8594877 90 6 0.8577354 130 6 0.974713 0.8690476 1.000000 0.9396552 0.562500 0.937437 0.9000000 0.8055556 1.000000 0.950000 0.8979384 0.750000 0.9166667 NA 0.8250000 0.4597083 0.7500000 0.9529034 0.9722222 0.935236 0.772321 0.9133987 1.000000 0.8618881 0.9843750 0.9144886 0.927083 1.000000 0.956856 0.9305556 0.9474638 0.8808271 0.9339721 0.9761905 0.6136768 1.0000e+00 0.88888889 0.9800000 0.964286 0.9609070 0.990000 0.9678030 0.9718407 0 0.8415094 0.8334975 -0.00438939 6 0.779552 0.786737 -0.00718548 0.76534499 4.8396e-01 insignificant 1.00000 1.000000 insignificant 0.98365996 1.9076e-01 insignificant 1.00000 1.000000 insignificant -0.08537197 0.17649985 lowCoverage 1.00000 lowCoverage 0.8415094 0.8250000 -0.00386703 6 0.779552 0.7700080 0.0095437 5.6075e-01 2.5439e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8761e-01 8.4514e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0644858 5.0798e-01 lowCoverage 1.0000e+00 lowCoverage 0.8415094 0.8715596 -0.04676216 6 0.7795517 0.8267158 -0.04716407 9.9418e-01 3.7578e-02 weaklyHypometh 1.0000e+00 7.2265e-01 insignificant 9.9065e-01 3.5125e-02 weaklyHypometh 1.0000e+00 0.78650491 insignificant -0.0940543 1.1536e-01 lowCoverage 1.0000e+00 lowCoverage 0.8334975 0.8250000 0.0035439 6 0.786737 0.7700080 0.01672921 5.0245e-01 2.5907e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.6508e-01 2.1965e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.02088614 8.0411e-01 lowCoverage 1.0000e+00 lowCoverage 0.8334975 0.8715596 -4.1102e-02 6 0.7867372 0.8267158 -3.9979e-02 9.8918e-01 2.2170e-02 weaklyHypometh 1.0000e+00 7.3900e-01 insignificant 9.5716e-01 1.4281e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00868235 7.7703e-01 lowCoverage 1.0000e+00 lowCoverage 0.8250000 0.8715596 -4.4822e-02 6 0.7700080 0.8267158 -0.05670780 9.4377e-01 5.9885e-02 insignificant 1.0000e+00 3.4616e-01 insignificant 8.1900e-01 3.3601e-01 insignificant 1.0000000 1.0000e+00 insignificant -2.9568e-02 7.1761e-01 lowCoverage 1.0000e+00 lowCoverage chr19 11708450 11709450 52988 ZNF833 ENSG00000197332 0.586301 179 10 0.579717 169 10 0.588810 95 10 0.6866024 161 10 0.7277976 74 7 0.663099 368 10 0.5541667 90 10 0.5748731 136 10 0.6015745 89 7 0.567583 103 7 0.659791 279 10 0.4888889 38 2 0.63852814 112 10 0.657672 45 6 0.5935233 91 7 0.5014006 53 3 0.3938272 32 2 0.7186604 184 10 0.6723529 160 10 0.701221 275 10 0.669524 55 5 0.652619 91 10 0.649524 143 7 0.7103846 67 4 0.689306 66 7 0.6143548 192 10 0.717971 68 3 0.559524 40 6 0.700830 148 10 0.713233 162 10 0.6422277 204 10 0.6236449 388 10 0.5987337 188 10 0.4944444 97 10 0.6490761 132 7 0.7390110 27 2 0.6268687 92 8 0.6766504 202 10 0.612209 170 10 0.6832742 198 10 0.6433876 207 7 0.6228168 133 10 0.7076709 190 10 0.706440 0.6720339 0.602727 0.8030651 0.785519 0.752913 0.7234798 0.6711768 0.648100 0.664882 0.7489043 0.664841 0.7561531 0.7697013 0.7656900 0.6092174 0.5787966 0.7945897 0.7628990 0.772630 0.800749 0.7260731 0.753476 0.7861141 0.8057381 0.7129749 0.829312 0.750373 0.799013 0.7854548 0.7730984 0.6995490 0.6473787 0.6149713 0.6803472 7.5210e-01 0.72122635 0.7326695 0.763950 0.7612841 0.766375 0.6919616 0.7714947 3 0.7061837 0.6995074 -0.01647870 10 0.639483 0.657384 -0.01790144 0.76046550 1.0759e-01 insignificant 1.00000 1.000000 insignificant 0.94382155 3.9858e-03 weaklyHypometh 1.00000 0.442872 insignificant -0.05410900 0.02725124 weaklyHypometh 1.00000 insignificant 0.7061837 0.6626016 0.03082580 10 0.639483 0.6209951 0.0184876 3.2067e-02 5.2471e-01 weaklyHypermeth 1.5270e-01 1.0000e+00 insignificant 2.2550e-01 2.7234e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0229779 5.6580e-01 insignificant 1.0000e+00 insignificant 0.7061837 0.7383073 -0.02502194 10 0.6394827 0.6634451 -0.02396242 8.5315e-01 1.6362e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.4523e-01 1.7736e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0460523 9.9508e-02 insignificant 9.4386e-01 insignificant 0.6995074 0.6626016 0.0493129 10 0.657384 0.6209951 0.03638906 3.0418e-03 9.4788e-01 weaklyHypermeth 2.0553e-02 1.0000e+00 weaklyHypermeth 3.5847e-03 9.3947e-01 weaklyHypermeth 3.0379e-02 1.0000000 weaklyHypermeth 0.03113110 4.2048e-01 insignificant 1.0000e+00 insignificant 0.6995074 0.7383073 -7.4160e-03 10 0.6573841 0.6634451 -6.0610e-03 4.3994e-01 1.5583e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.3801e-01 6.5623e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00805669 7.3206e-01 insignificant 1.0000e+00 insignificant 0.6626016 0.7383073 -5.8623e-02 10 0.6209951 0.6634451 -0.04245004 7.8329e-01 1.8102e-03 weaklyHypometh 1.0000e+00 1.6093e-02 weaklyHypometh 7.9456e-01 3.3540e-02 weaklyHypometh 1.0000000 2.6962e-01 insignificant -2.3074e-02 5.6293e-01 insignificant 1.0000e+00 insignificant chr19 12884550 12885550 52998 ENSG00000213269 0.283693 385 6 0.255872 192 6 0.341860 222 6 0.2650502 450 7 0.6912698 121 6 0.476922 356 6 0.4363894 224 6 0.4045539 222 6 0.7048628 248 6 0.369315 240 6 0.535256 230 6 0.5956590 220 6 0.47115342 294 6 0.518350 154 6 0.5603231 262 6 0.3586221 178 6 0.3166066 128 6 0.2860788 478 6 0.5045319 134 6 0.389834 233 6 0.751136 55 5 0.277969 224 6 0.710639 159 6 0.3610973 180 6 0.272613 123 6 0.3606381 225 6 0.517922 144 6 0.630765 105 6 0.566738 232 6 0.385629 245 6 0.3021169 183 6 0.4784030 313 6 0.0246583 195 6 0.0174194 166 6 0.0052910 280 6 0.0128205 78 6 0.0000000 120 6 0.0404477 218 6 0.089204 407 6 0.1400039 403 7 0.0944053 450 7 0.4219145 332 6 0.1494206 322 7 0.320340 0.2360349 0.330535 0.3038358 0.684338 0.458756 0.4209911 0.3889033 0.704041 0.355621 0.5252703 0.519696 0.5463061 0.5111057 0.6533626 0.3500820 0.3046941 0.2868930 0.4932283 0.381864 0.748860 0.2810516 0.658509 0.4121247 0.2660110 0.4146322 0.505874 0.735298 0.572487 0.2712152 0.3518402 0.4687208 0.0250204 0.0176074 0.0047350 1.3690e-02 0.00000000 0.0461986 0.076048 0.1418693 0.092887 0.4174605 0.1264614 6 0.4240595 0.4442413 -0.01858416 6 0.373814 0.432350 -0.05853681 0.56978529 2.1787e-01 insignificant 1.00000 1.000000 insignificant 0.75974537 2.5272e-01 insignificant 1.00000 1.000000 insignificant -0.02966201 0.60903750 insignificant 1.00000 insignificant 0.4241997 0.0198675 0.41087293 6 0.391501 0.0170834 0.3744178 3.0119e-28 1.0000e+00 hypermethylated 7.0043e-27 1.0000e+00 hypermethylated 1.5860e-16 1.0000e+00 hypermethylated 5.6643e-15 1.0000e+00 hypermethylated 0.4215374 9.6264e-12 hypermethylated 7.4049e-10 hypermethylated 0.4240595 0.1666667 0.25652744 6 0.3738135 0.1501351 0.22367844 8.6578e-12 9.9991e-01 hypermethylated 8.6578e-10 1.0000e+00 hypermethylated 6.0913e-09 9.9989e-01 hypermethylated 5.7936e-07 1.00000000 hypermethylated 0.2593206 9.1727e-03 weaklyHypermeth 2.0847e-01 insignificant 0.4450549 0.0198675 0.4225989 6 0.494115 0.0170834 0.47703125 6.9537e-21 1.0000e+00 hypermethylated 1.5117e-19 1.0000e+00 hypermethylated 2.8463e-14 1.0000e+00 hypermethylated 1.0165e-12 1.0000000 hypermethylated 0.45119942 1.2852e-06 hypermethylated 4.6503e-05 hypermethylated 0.4442413 0.1666667 2.7825e-01 6 0.4323503 0.1501351 2.8222e-01 7.4569e-09 1.0000e+00 hypermethylated 4.6606e-07 1.0000e+00 hypermethylated 3.9472e-08 1.0000e+00 hypermethylated 7.8944e-06 1.0000e+00 hypermethylated 0.28898259 4.9569e-03 weaklyHypermeth 2.4784e-01 insignificant 0.0198675 0.1667538 -1.4368e-01 6 0.0170834 0.1715829 -0.15449953 1.0000e+00 3.9153e-06 weaklyHypometh 1.0000e+00 5.1819e-05 weaklyHypometh 1.0000e+00 4.2333e-09 weaklyHypometh 1.0000000 1.5119e-07 weaklyHypometh -1.6222e-01 5.8416e-02 insignificant 4.7493e-01 insignificant chr19 12954750 12955750 53000 DAND5 ENSG00000179284 0.236584 904 18 0.181476 861 26 0.183836 886 25 0.1745074 727 18 0.2170737 795 26 0.177815 1148 26 0.1833525 907 26 0.1823290 659 26 0.1418069 754 26 0.165987 753 25 0.208599 1098 26 0.1337355 785 25 0.15132674 827 25 0.134722 376 12 0.2014747 1036 25 0.1336291 805 25 0.2535051 3073 16 0.1756654 914 22 0.1791881 1604 25 0.153934 916 24 0.145028 617 23 0.277217 157 13 0.223193 584 26 0.1987179 472 22 0.182870 595 17 0.1339324 1139 26 0.155865 795 23 0.192923 412 22 0.203032 918 25 0.193151 998 26 0.1763003 1098 26 0.1933482 1081 26 0.1583160 686 26 0.1335546 1001 26 0.1817186 584 24 0.1842995 221 12 0.1596354 435 24 0.1594184 1108 26 0.164534 837 21 0.2879390 942 23 0.1983588 819 18 0.2513062 1485 17 0.1903095 717 25 0.151821 0.1516493 0.121992 0.1318215 0.150377 0.149059 0.1709058 0.1482790 0.128720 0.131779 0.1440657 0.127107 0.1434399 0.1539100 0.1453085 0.1361145 0.1619636 0.1398693 0.1367770 0.134914 0.146171 0.1499901 0.128939 0.1459625 0.1365168 0.1329195 0.095683 0.140246 0.135540 0.1287600 0.1436482 0.1633124 0.1309520 0.1130590 0.1328985 1.4879e-01 0.14192492 0.1316852 0.140287 0.1474715 0.133694 0.1374677 0.1388054 15 0.0946205 0.1277220 -0.00124301 26 0.183155 0.212702 -0.02954696 0.70130083 7.2005e-01 insignificant 1.00000 1.000000 insignificant 0.44231857 9.9790e-01 insignificant 1.00000 1.000000 insignificant -0.01110383 0.40748755 insignificant 1.00000 insignificant 0.0945407 0.1214675 0.00848187 26 0.183131 0.1569881 0.0261431 2.6448e-02 9.9983e-01 weaklyHypermeth 1.2839e-01 1.0000e+00 insignificant 3.8376e-02 9.9999e-01 weaklyHypermeth 2.3836e-01 1.0000e+00 insignificant 0.0157037 1.5794e-01 insignificant 8.9232e-01 insignificant 0.0945769 0.1807003 -0.00312201 19 0.1735536 0.3029428 -0.12938923 6.5346e-01 8.7607e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.7018e-01 9.6669e-01 insignificant 1.0000e+00 1.00000000 insignificant -0.0399621 1.5174e-01 insignificant 1.0000e+00 insignificant 0.1272892 0.1214976 0.0092820 26 0.180409 0.1624015 0.01800765 3.1600e-01 9.9978e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.8756e-01 9.9998e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.02680753 5.9773e-02 insignificant 4.4985e-01 insignificant 0.1280081 0.1805671 -9.0583e-04 19 0.2655440 0.2902295 -2.4685e-02 8.6306e-01 6.8110e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7084e-01 8.5144e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02885823 2.9003e-01 insignificant 1.0000e+00 insignificant 0.1214976 0.1800542 -1.1057e-02 19 0.1624015 0.2412798 -0.07887826 1.0000e+00 5.4808e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.0000e+00 7.1593e-01 insignificant 1.0000000 1.0000e+00 insignificant -5.5666e-02 6.5873e-02 insignificant 5.1868e-01 insignificant chr19 12993850 12994850 53004 NFIX ENSG00000008441 0.0710628 179 4 0.0605989 360 5 0.0577683 111 8 0.0453869 140 8 0.0284091 148 8 0.5682634 265 4 0.0301136 213 8 0.0394895 156 8 0.0148077 81 8 0.0956790 46 6 0.0319522 291 8 0.1272321 42 4 0.1801587 52 6 0.0000000 54 2 0.1546841 85 2 0.0000000 28 2 0.2862298 5262 2 0.29016129 111 2 0.0912698 121 2 0.1743731 140 2 0.1213768 103 6 0.0000000 22 0 0.1889683 95 4 0.0848818 114 4 0.2375000 46 4 0.0651392 300 8 0.0686308 80 7 0.1538314 80 3 0.0549848 146 2 0.14410151 383 5 0.1168215 389 5 0.2827015 155 4 0.1111111 208 8 0.0022321 129 2 0.0055556 395 8 0.0000000 29 2 0.158937 245 9 0.00281955 303 8 0.1733539 226 8 0.1590837 253 8 0.0656627 186 8 0.4587797 238 2 0.1270487 322 8 0.0611981 0.0639791 0.1367884 0.0318202 0.0000000 0.1838902 0.0526281 0.10841683 0.0546657 0.16043614 0.0593599 0.2149533 0.15677168 0.0000000 0.0252886 0.00109745 0.2638019 0.2043563 0.17578994 0.0213618 0.1939252 0.00000000 0.0972111 0.02907931 0.0806075 0.0614503 0.0672048 0.0148244 0.0767004 0.03770047 0.09530322 0.1298065 0.0000000 0.0076769 0.0000000 0.0000e+00 0.0058126 0.0096971 0.0393446 0.1371684 0.0282760 0.0958695 0.0481003 2 0.2192771 0.0811094 1.1761e-01 5 0.1318638 0.2193339 -0.08747008 1.9076e-05 6.0773e-01 weaklyHypermeth 0.00795912 1.0000e+00 weaklyHypermeth 6.1229e-01 3.5207e-01 insignificant 1.0000000 1.000000 insignificant -0.00919610 0.812167 lowCoverage 1 lowCoverage 0.2193049 0.0107280 0.19258277 8 0.1465153 0.0645401 0.0819753 2.5183e-09 9.9980e-01 weaklyHypermeth 2.9979e-08 1.0000e+00 weaklyHypermeth 6.0210e-04 9.9993e-01 weaklyHypermeth 6.0210e-03 1.0000e+00 weaklyHypermeth 7.0606e-02 1.0924e-01 lowCoverage 6.9137e-01 lowCoverage 0.2193049 0.0825163 0.11933642 8 0.1465153 0.1661779 -0.0196625 1.2765e-02 2.5010e-01 weaklyHypermeth 2.5529e-01 1.0000e+00 insignificant 9.7553e-01 2.5952e-03 inconclusive 1.0000e+00 1.1796e-01 insignificant -7.9404e-02 3.2989e-01 lowCoverage 1.0000000 lowCoverage 0.0800628 0.0122418 0.06995791 5 0.1193339 0.1580861 -0.0387522 1.5453e-04 9.9997e-01 weaklyHypermeth 1.2986e-03 1.0000e+00 weaklyHypermeth 1.0024e-03 9.9542e-01 weaklyHypermeth 1.0334e-02 1.0000e+00 weaklyHypermeth 0.0798022 5.2293e-02 lowCoverage 3.6569e-01 lowCoverage 0.0800628 0.0824490 -2.4437e-03 5 0.1193339 0.1495601 -0.03022621 8.4766e-01 1.5913e-03 weaklyHypometh 1.0000e+00 6.0816e-02 weaklyHypometh 9.7312e-01 1.6201e-02 weaklyHypometh 1.0000e+00 4.6290e-01 insignificant -0.07020762 0.37426192 lowCoverage 1.00000 lowCoverage 0.0122418 0.0824490 -0.07038816 8 0.1580861 0.1495601 0.00852596 1.0000e+00 3.7010e-07 weaklyHypometh 1.0000e+00 6.6090e-06 weaklyHypometh 9.9999e-01 2.2264e-06 weaklyHypometh 1.0000000 7.9513e-05 weaklyHypometh -0.1500099 9.3673e-02 insignificant 0.62349890 insignificant chr19 13008150 13009150 53006 NFIX ENSG00000008441 0.6981707 110 6 0.6217206 461 8 0.5275585 281 8 0.7131556 168 6 0.4791834 186 8 0.7254049 292 6 0.8023900 332 8 0.6130994 259 8 0.6622729 216 8 0.5649907 253 8 0.7899447 439 8 0.5268281 172 8 0.7099296 339 8 0.6427486 138 6 0.6097930 334 8 0.6302998 135 8 0.4963235 50 2 0.65883678 182 5 0.6918777 488 8 0.4788511 275 8 0.8356666 155 8 0.4954545 119 6 0.5261905 171 8 0.3583177 130 8 0.5421245 62 2 0.7296739 502 8 0.5343254 282 8 0.7742504 93 8 0.6924743 555 8 0.64793915 549 8 0.6661960 569 7 0.7805814 266 8 0.2279251 383 8 0.1972527 261 8 0.2505952 306 4 0.6388889 16 2 0.214280 282 8 0.56979639 405 8 0.6766618 188 6 0.5953065 179 8 0.7296402 136 2 0.7076730 123 6 0.6502564 129 6 0.7885985 0.6852728 0.5213702 0.7441579 0.5634548 0.7265835 0.7688021 0.67270550 0.6561385 0.69753435 0.8078468 0.7128971 0.80328569 0.6316158 0.7018348 0.67121535 NA 0.6961865 0.74765889 0.4197787 0.8110425 0.65360923 0.6586425 0.34445068 0.6702258 0.8062308 0.6132749 0.8120351 0.7777610 0.75474820 0.75633699 0.8164745 0.1997248 0.1683877 0.4174393 4.6758e-01 0.1532622 0.6188007 0.7315189 0.7161563 0.5934051 0.6463031 0.5479097 2 0.6868885 0.7211121 -4.7409e-02 8 0.5726544 0.6030349 -0.03038053 9.8149e-01 1.4916e-01 insignificant 1.00000000 1.0000e+00 insignificant 8.9621e-01 4.7590e-01 insignificant 1.0000000 1.000000 insignificant 0.00023611 0.995986 insignificant 1 insignificant 0.6870349 0.3387780 0.35313575 8 0.5807271 0.2884964 0.2922307 9.7902e-24 9.9980e-01 hypermethylated 3.4965e-22 1.0000e+00 hypermethylated 3.9083e-10 9.9927e-01 hypermethylated 1.2213e-08 1.0000e+00 hypermethylated 2.8238e-01 1.6422e-02 weaklyHypermeth 1.6935e-01 insignificant 0.6870349 0.6384106 0.04866119 6 0.5807271 0.5655117 0.0152154 2.2347e-01 6.0394e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.7492e-01 1.8990e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -3.9739e-02 2.3652e-01 insignificant 1.0000000 insignificant 0.7212877 0.3387780 0.37319452 8 0.6033721 0.2884964 0.3148757 2.2725e-19 9.9995e-01 hypermethylated 8.7404e-18 1.0000e+00 hypermethylated 9.9052e-08 9.9959e-01 hypermethylated 3.0954e-06 1.0000e+00 hypermethylated 0.2821431 1.5548e-02 weaklyHypermeth 1.7121e-01 insignificant 0.7212877 0.6384106 1.0115e-01 6 0.6033721 0.5655117 0.03786047 3.5585e-02 8.8933e-01 weaklyHypermeth 6.4526e-01 1.0000e+00 insignificant 7.2756e-01 4.0404e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03997470 0.40967968 insignificant 1.00000 insignificant 0.3387780 0.6384106 -0.28303751 6 0.2884964 0.5655117 -0.27701524 1.0000e+00 1.1437e-06 hypomethylated 1.0000e+00 1.9061e-05 hypomethylated 1.0000e+00 4.6617e-05 hypomethylated 1.0000000 1.0507e-03 hypomethylated -0.3221178 9.4366e-03 weaklyHypometh 0.14084436 insignificant chr19 13032750 13033750 53008 NFIX ENSG00000008441 0.0097394 428 10 0.1648789 357 10 0.0366446 285 10 0.0175237 468 10 0.0134056 238 10 0.0632198 533 11 0.0486655 426 11 0.0586971 268 10 0.0076865 470 10 0.0974790 374 8 0.1950552 319 11 0.0261767 218 8 0.0136618 377 7 0.0485492 200 7 0.0228737 302 7 0.0354167 216 8 0.0140523 249 8 0.11467361 563 10 0.0763889 195 8 0.0447086 549 10 0.0500000 131 8 0.0238828 209 7 0.0254154 318 12 0.0094697 224 11 0.0290328 291 10 0.0186304 402 11 0.0106164 194 10 0.1619648 191 8 0.0109081 219 9 0.01202562 468 11 0.0714286 421 11 0.0235265 516 10 0.0258971 388 11 0.0045455 193 10 0.1281250 165 7 0.0138340 270 9 0.197222 171 11 0.01607237 437 11 0.0153882 592 10 0.1025565 405 11 0.0219907 397 11 0.0102867 284 8 0.1051937 459 11 0.0208377 0.0184117 0.0368267 0.0171893 0.0223141 0.0340975 0.0403734 0.02708765 0.0222773 0.02570950 0.0381673 0.0207486 0.01769262 0.0397765 0.0334251 0.04444708 0.0221277 0.0397530 0.04186795 0.0307310 0.0325282 0.02366223 0.0322035 0.00750866 0.0432356 0.0257974 0.0253768 0.0290306 0.0093985 0.02027114 0.00000000 0.0345111 0.0128545 0.0077295 0.0027232 1.2252e-03 0.0032206 0.0119641 0.0165336 0.0376659 0.0125693 0.0206445 0.0207822 5 0.0274421 0.0214904 6.5628e-03 11 0.1801533 0.0488453 0.13130802 7.6665e-02 9.8848e-01 insignificant 1.00000000 1.0000e+00 insignificant 8.6036e-02 9.9767e-01 insignificant 1.0000000 1.000000 insignificant 0.01823309 0.294590 insignificant 1 insignificant 0.0271654 0.0191004 0.01181666 10 0.1213298 0.1773579 -0.0560281 1.1137e-01 8.2568e-01 insignificant 5.0167e-01 1.0000e+00 insignificant 3.8318e-02 9.9465e-01 weaklyHypermeth 2.4099e-01 1.0000e+00 insignificant -8.8078e-03 8.0656e-01 insignificant 1.0000e+00 insignificant 0.0270309 0.0215255 0.00414851 11 0.1080795 0.1442582 -0.0361787 7.1823e-01 7.4799e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.7659e-01 8.2299e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.3917e-03 8.6347e-01 insignificant 1.0000000 insignificant 0.0214964 0.0191122 0.00289498 10 0.0518981 0.1884427 -0.1365446 5.9097e-01 8.6067e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.9273e-01 8.8337e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0270409 4.6446e-01 insignificant 1.0000e+00 insignificant 0.0215445 0.0215356 -7.0947e-04 11 0.0553580 0.1538755 -0.09851749 9.1812e-01 7.2749e-02 insignificant 1.0000e+00 9.2087e-01 insignificant 9.7758e-01 1.8624e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01384140 0.59724419 insignificant 1.00000 insignificant 0.0185185 0.0215356 -0.00201593 10 0.1676722 0.1538755 0.01379677 9.8917e-01 4.3350e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9904e-01 1.9190e-01 insignificant 1.0000000 9.4533e-01 insignificant 0.0131995 7.4356e-01 insignificant 1.00000000 insignificant chr19 13050550 13051550 53011 NFIX ENSG00000008441 0.7043152 300 10 0.6315642 368 13 0.6286130 314 13 0.6189059 370 9 0.5856972 197 12 0.7115969 446 11 0.5333538 196 8 0.6682915 355 14 0.5819989 269 13 0.5833406 272 13 0.6183915 473 13 0.6755527 127 6 0.6234283 442 13 0.6318675 185 7 0.6636523 246 9 0.6433442 106 6 0.4050000 47 2 0.61882618 642 8 0.6792512 385 13 0.6526706 299 9 0.6589336 160 9 0.5354600 158 9 0.6181458 252 13 0.5407456 166 11 0.8289988 129 7 0.6629458 418 13 0.6682891 302 11 0.5440476 85 7 0.6263247 354 12 0.69928407 442 13 0.6854155 459 13 0.6489925 393 13 0.2785436 353 13 0.3934301 396 13 0.2983282 275 5 0.3909782 51 4 0.375546 276 13 0.48257882 551 13 0.6538177 314 8 0.4919466 400 9 0.6375660 343 8 0.4533235 589 9 0.4665116 449 8 0.7512228 0.5505613 0.7142773 0.6804058 0.5483457 0.7157244 0.6455935 0.70037495 0.5790507 0.66338304 0.6669435 0.6568955 0.62136789 0.6355633 0.6737368 0.64632907 0.2620690 0.5889350 0.73191553 0.6366898 0.6105595 0.50073710 0.7665414 0.61820905 0.7237989 0.7359258 0.5935305 0.6901114 0.5960431 0.72535455 0.71990831 0.6799479 0.2218274 0.3507879 0.2142189 2.4380e-01 0.2606215 0.2362689 0.7442749 0.5789572 0.6165138 0.5235965 0.6028102 3 0.6449743 0.6806520 -2.6614e-02 13 0.6191186 0.6087519 0.01036669 9.8806e-01 1.2809e-01 insignificant 1.00000000 1.0000e+00 insignificant 8.9294e-01 3.0309e-01 insignificant 1.0000000 1.000000 insignificant -0.02014883 0.480007 insignificant 1 insignificant 0.6450224 0.3540242 0.32280845 13 0.6276271 0.3839227 0.2437044 1.1743e-36 9.9600e-01 hypermethylated 6.5241e-35 1.0000e+00 hypermethylated 9.2351e-16 9.9995e-01 hypermethylated 5.4324e-14 1.0000e+00 hypermethylated 2.5308e-01 8.4250e-05 hypermethylated 2.3621e-03 hypermethylated 0.6450224 0.4964200 0.07149304 8 0.6276271 0.5438070 0.0838201 2.7240e-05 8.0918e-01 weaklyHypermeth 1.2971e-03 1.0000e+00 weaklyHypermeth 3.3542e-02 8.5417e-01 weaklyHypermeth 7.9862e-01 1.0000e+00 insignificant 8.2350e-02 1.3302e-01 insignificant 1.0000000 insignificant 0.6807356 0.3538381 0.35858411 13 0.6487519 0.3583278 0.2904241 1.2545e-24 9.9988e-01 hypermethylated 5.7025e-23 1.0000e+00 hypermethylated 7.9926e-13 9.9996e-01 hypermethylated 5.3284e-11 1.0000e+00 hypermethylated 0.2732311 1.7761e-05 hypermethylated 7.1044e-04 hypermethylated 0.6808575 0.4964200 9.8380e-02 8 0.6522342 0.5438070 0.10842724 5.3472e-05 7.1827e-01 weaklyHypermeth 2.9707e-03 1.0000e+00 weaklyHypermeth 7.3678e-02 9.2691e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.10249884 0.07976383 insignificant 1.00000 insignificant 0.3540242 0.4964200 -0.24290020 8 0.3839227 0.5438070 -0.15988430 4.6038e-01 4.7771e-12 hypomethylated 1.0000e+00 1.7693e-10 hypomethylated 9.9995e-01 3.7461e-08 hypomethylated 1.0000000 2.3413e-06 hypomethylated -0.1707323 1.3356e-02 weaklyHypometh 0.17741521 insignificant chr19 13066250 13067250 53013 NFIX ENSG00000008441 0.0620618 469 6 0.0972397 414 6 0.1484986 212 6 0.0766712 382 6 0.0287481 262 6 0.3046730 549 6 0.1974963 298 6 0.0626591 278 6 0.0460517 275 6 0.0891439 223 6 0.0530807 348 6 0.0380952 184 6 0.0377104 170 6 0.1107113 218 6 0.0716822 331 6 0.1716641 172 6 0.0000000 15 1 0.11274145 504 6 0.0264726 446 6 0.2010597 414 6 0.1339646 152 6 0.0000000 49 3 0.0833420 310 6 0.0595960 131 6 0.1666667 32 1 0.0705251 407 6 0.0339272 380 6 0.1158289 205 6 0.0523883 315 6 0.04684118 413 6 0.0185906 430 6 0.0793773 398 6 0.5203590 304 6 0.5585745 308 6 0.6168460 475 4 0.0294118 62 4 0.598419 192 6 0.19886876 478 6 0.0633909 596 6 0.2310503 454 6 0.1663097 429 6 0.0416849 737 6 0.0739785 354 6 0.0682170 0.0799253 0.1616154 0.0838011 0.0271868 0.1398100 0.0678550 0.05773319 0.0377538 0.10268769 0.0587084 0.0409964 0.04851880 0.1304426 0.0766199 0.20510683 0.0686422 0.1363222 0.02829201 0.0741839 0.1409887 0.06061227 0.0987342 0.03901197 0.2226891 0.0609157 0.0301543 0.1078491 0.0480345 0.04894668 0.02063785 0.0858308 0.4681831 0.4712206 0.6732399 1.1537e-01 0.4797149 0.1480894 0.0499263 0.0850449 0.0292511 0.0371647 0.0796472 6 0.0805456 0.0608318 2.1353e-02 6 0.1739447 0.0514200 0.12252467 5.4480e-02 9.9593e-01 insignificant 1.00000000 1.0000e+00 insignificant 1.4813e-01 9.9512e-01 insignificant 1.0000000 1.000000 insignificant 0.02506907 0.259039 insignificant 1 insignificant 0.0800975 0.4584937 -0.37778632 6 0.0668018 0.5500265 -0.4832247 1.0000e+00 7.2605e-27 hypomethylated 1.0000e+00 2.4202e-24 hypomethylated 1.0000e+00 2.1523e-07 hypomethylated 1.0000e+00 5.3806e-05 hypomethylated -3.2359e-01 2.2612e-02 weaklyHypometh 2.1132e-01 insignificant 0.0803963 0.0591670 0.02309766 6 0.2459516 0.1728579 0.0730937 1.9461e-01 9.0187e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.4847e-01 7.3937e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -1.8460e-02 6.5828e-01 insignificant 1.0000000 insignificant 0.0608507 0.4581958 -0.39770015 6 0.0599900 0.4750309 -0.4150409 1.0000e+00 2.1969e-19 hypomethylated 1.0000e+00 1.0985e-16 hypomethylated 1.0000e+00 5.8447e-07 hypomethylated 1.0000e+00 1.1689e-04 hypomethylated -0.3486592 1.7239e-02 weaklyHypometh 1.7582e-01 insignificant 0.0608507 0.0588235 3.6037e-03 6 0.0599900 0.0638105 -0.00382052 5.3895e-01 2.5169e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.3563e-01 3.1767e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04352890 0.30759445 insignificant 1.00000 insignificant 0.4581958 0.0588235 0.40034409 6 0.4750309 0.0638105 0.41122037 3.2461e-09 1.0000e+00 hypermethylated 1.6230e-06 1.0000e+00 hypermethylated 1.0779e-04 1.0000e+00 hypermethylated 0.0538657 1.0000e+00 hypermethylated 0.3051303 2.7360e-02 weaklyHypermeth 0.25333426 insignificant chr19 13093450 13094450 53014 NACC1 ENSG00000160877 0.7830763 45 4 0.8818051 97 6 0.7873684 53 5 1.0000000 7 0 0.7546784 62 4 0.8625731 38 3 0.9094090 57 5 0.8458333 53 5 0.7948432 78 5 0.9011905 49 5 0.9049700 165 6 0.6055556 34 3 0.8752174 99 5 NA 0 0 0.8922960 66 4 0.8214286 39 2 0.7788889 38 3 0.91666667 26 3 0.8177424 102 5 0.9176471 41 4 0.9047271 82 5 0.7916667 9 0 0.8460091 83 5 0.9458874 38 3 1.0000000 4 0 0.9244885 94 6 0.8802933 58 5 0.9221230 41 3 0.8999278 50 5 0.87962963 63 6 0.9003448 80 6 0.8673611 70 5 0.7667125 80 6 0.7957516 62 5 0.7500000 101 4 0.7222222 8 0 0.680556 30 3 0.71111111 73 5 0.9375000 10 0 0.9373737 44 3 1.0000000 11 1 0.9017857 28 3 1.0000000 8 0 0.8708461 0.8833858 0.7827657 0.9780732 0.9215686 0.9535604 0.8688966 0.76470588 0.8701567 0.92962185 0.8998923 0.5392157 0.83414322 NA 0.9361967 0.82773109 0.7532680 0.8774510 0.85320550 0.8546713 0.8759890 0.73400347 0.7924225 0.93659282 0.9791015 0.9341910 0.8375497 0.8946078 0.8724217 0.86321195 0.90767710 0.8284314 0.7364253 0.6568627 0.9117647 9.2157e-01 0.5490196 0.6470588 0.9124650 0.9471182 1.0000000 0.9514472 0.9859944 0 0.8468233 0.8809524 -2.8386e-02 5 0.8584079 0.8872620 -0.02885408 8.5710e-01 4.9009e-02 weaklyHypometh 1.00000000 1.0000e+00 insignificant 8.5309e-01 6.5613e-02 insignificant 1.0000000 1.000000 insignificant -0.05207208 0.043344 lowCoverage 1 lowCoverage 0.8468233 0.7627119 0.08754155 5 0.8584079 0.7610758 0.0973322 6.4601e-03 6.8319e-01 weaklyHypermeth 3.7127e-02 1.0000e+00 weaklyHypermeth 4.3440e-01 6.0888e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.0707e-01 5.9811e-04 lowCoverage 1.1728e-02 lowCoverage 0.8468233 0.9306931 -0.09968749 1 0.8584079 0.9435556 -0.0851477 9.9795e-01 4.6611e-03 lowCoverage 1.0000e+00 1.2598e-01 lowCoverage 9.9993e-01 5.4720e-03 lowCoverage 1.0000e+00 2.0267e-01 lowCoverage -1.1053e-01 1.4138e-03 lowCoverage 0.0744091 lowCoverage 0.8809524 0.7627119 0.11800736 5 0.8872620 0.7610758 0.1261862 1.0964e-03 8.3509e-01 weaklyHypermeth 8.0031e-03 1.0000e+00 weaklyHypermeth 6.7921e-02 8.0309e-01 insignificant 4.0190e-01 1.0000e+00 insignificant 0.1591460 1.1058e-05 lowCoverage 4.8080e-04 lowCoverage 0.8809524 0.9306931 -6.9295e-02 1 0.8872620 0.9435556 -0.05629365 9.9051e-01 1.5456e-02 lowCoverage 1.0000e+00 3.5944e-01 lowCoverage 9.9972e-01 1.3684e-02 lowCoverage 1.0000e+00 4.1466e-01 lowCoverage -0.05846035 0.04056361 lowCoverage 0.88182 lowCoverage 0.7627119 0.9306931 -0.15786494 1 0.7610758 0.9435556 -0.18247989 9.8623e-01 5.2717e-02 lowCoverage 1.0000e+00 2.7457e-01 lowCoverage 9.9954e-01 7.6147e-02 lowCoverage 1.0000000 4.4531e-01 lowCoverage -0.2176064 2.0332e-05 lowCoverage 0.00225910 lowCoverage chr19 13135050 13136050 53015 ENSG00000213253 0.2703035 99 3 0.0041667 175 6 0.0050505 87 6 0.0000000 150 3 0.0000000 97 6 0.0056818 143 3 0.0151515 148 6 0.0410557 98 6 0.1613387 54 3 0.0000000 40 3 0.2904349 161 6 0.0047619 73 3 0.5000000 35 1 0.0000000 24 3 0.0952381 48 3 0.0277778 52 6 0.0476190 21 1 0.01190476 57 3 0.0104167 71 3 0.2701592 123 3 0.0555556 42 3 0.1710526 52 3 0.0000000 60 3 0.0083333 100 5 0.0000000 359 6 0.0000000 185 6 0.1607143 84 6 0.0150376 41 2 0.0000000 73 3 0.15037594 202 6 0.0161582 225 6 0.2625000 101 3 0.0000000 136 6 0.0000000 102 6 0.5000000 19 1 0.0000000 223 6 0.095159 141 6 0.06789044 141 6 0.2500000 120 3 0.0931373 98 3 0.0000000 109 3 0.0000000 94 3 0.0027778 114 3 0.0322948 0.0042517 0.0199959 0.0000000 0.0000000 0.0299938 0.0000000 0.04257187 0.0408401 0.00000000 0.0149969 0.0188533 0.00000000 0.0000000 0.0000000 0.00000000 0.0331574 0.0314221 0.02062075 0.0363197 0.0000000 0.01736484 0.0000000 0.03299320 0.0000000 0.0000000 0.0000000 0.0694594 0.0000000 0.00000000 0.01118413 0.0329932 0.0000000 0.0000000 0.0000000 0.0000e+00 0.0153457 0.0149969 0.0000000 0.0100040 0.0000000 0.0000000 0.0109977 1 0.0262707 0.0111622 1.4535e-02 3 0.1224359 0.0827344 0.03970151 4.7619e-02 9.9735e-01 lowCoverage 1.00000000 1.0000e+00 lowCoverage 1.0299e-01 9.9460e-01 lowCoverage 1.0000000 1.000000 lowCoverage 0.01807574 0.660090 lowCoverage 1 lowCoverage 0.0262707 0.0144357 0.01619755 3 0.1224359 0.0860846 0.0363513 1.0203e-01 9.8900e-01 lowCoverage 4.6168e-01 1.0000e+00 lowCoverage 1.1445e-01 9.8549e-01 lowCoverage 6.3937e-01 1.0000e+00 lowCoverage -2.2455e-02 8.0083e-01 lowCoverage 1.0000e+00 lowCoverage 0.0246277 0.0074766 0.00909701 3 0.0428419 0.0537292 -0.0108873 2.4381e-01 5.1957e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 2.9702e-01 6.4845e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 1.8870e-02 7.5225e-01 lowCoverage 1.0000000 lowCoverage 0.0111622 0.0144357 0.00056954 6 0.0827344 0.0860846 -0.0033502 8.2493e-01 9.5116e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.1636e-01 9.3492e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0405309 6.4584e-01 lowCoverage 1.0000e+00 lowCoverage 0.0098749 0.0074766 8.4188e-04 3 0.0131901 0.0537292 -0.04053909 8.8948e-01 2.0928e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.3985e-01 3.6807e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.00079429 0.98896734 lowCoverage 1.00000 lowCoverage 0.0131579 0.0074766 -0.00329651 3 0.0170987 0.0537292 -0.03663054 8.5477e-01 5.0110e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.6547e-01 5.7934e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage 0.0413252 6.6958e-01 lowCoverage 1.00000000 lowCoverage chr19 13138850 13139850 53016 ENSG00000213253 0.1768512 368 11 0.1007518 416 11 0.1397979 540 11 0.1843943 283 11 0.1784068 396 11 0.2698691 523 11 0.1329720 475 11 0.1721884 494 11 0.1685123 578 11 0.1698334 778 11 0.1775267 323 11 0.1550537 575 11 0.1503085 423 11 0.0435257 359 4 0.1630738 744 11 0.1652062 522 11 0.1371109 203 11 0.17415657 326 11 0.1702420 440 11 0.2613647 429 11 0.1973360 155 11 0.1552350 240 11 0.1904952 315 11 0.2345938 201 11 0.1419691 179 11 0.1612139 531 11 0.2148822 372 11 0.2390470 244 10 0.1581736 377 11 0.14869909 616 11 0.1854294 487 11 0.1423774 519 11 0.1211289 253 11 0.1231702 313 11 0.1349206 416 10 0.1368228 186 11 0.161772 117 8 0.11957601 380 11 0.2282845 430 11 0.2611983 430 11 0.1965962 333 11 0.1790029 421 11 0.2398246 298 11 0.1395208 0.0731334 0.1034436 0.1447678 0.1334120 0.2435316 0.0996348 0.12885276 0.1273353 0.15091247 0.1363429 0.1180644 0.11089228 0.1423471 0.1244330 0.12289583 0.0965015 0.1336247 0.13731588 0.1667221 0.1559746 0.12302678 0.1459363 0.11726266 0.1042614 0.1208524 0.1627531 0.1966336 0.1245292 0.11330897 0.15279035 0.1068885 0.0865018 0.0914098 0.1024989 9.7211e-02 0.1147623 0.0837372 0.1932951 0.2413963 0.1668991 0.1554140 0.1968674 11 0.1128874 0.1366856 2.3602e-03 11 0.1845188 0.2119498 -0.02743100 5.5076e-01 8.3523e-01 insignificant 1.00000000 1.0000e+00 insignificant 5.3073e-01 9.1939e-01 insignificant 1.0000000 1.000000 insignificant -0.01623036 0.277127 insignificant 1 insignificant 0.1128874 0.0978979 0.04294379 11 0.1845188 0.1162560 0.0682628 1.1931e-07 1.0000e+00 weaklyHypermeth 1.2429e-06 1.0000e+00 weaklyHypermeth 1.0393e-08 1.0000e+00 weaklyHypermeth 2.9695e-07 1.0000e+00 weaklyHypermeth 3.1659e-02 1.8108e-02 weaklyHypermeth 1.7929e-01 insignificant 0.1128155 0.2400628 -0.05517388 11 0.1709902 0.2210393 -0.0500491 9.9779e-01 1.4746e-10 weaklyHypometh 1.0000e+00 3.8525e-08 weaklyHypometh 9.9934e-01 2.0579e-05 weaklyHypometh 1.0000e+00 5.1446e-03 weaklyHypometh -5.6424e-02 1.3328e-02 weaklyHypometh 0.3216468 insignificant 0.1366856 0.0978979 0.04112702 11 0.2119498 0.1162560 0.0956938 5.1288e-08 1.0000e+00 weaklyHypermeth 6.4110e-07 1.0000e+00 weaklyHypermeth 1.1822e-06 1.0000e+00 weaklyHypermeth 3.0569e-05 1.0000e+00 weaklyHypermeth 0.0478893 1.0446e-03 weaklyHypermeth 1.8654e-02 weaklyHypermeth 0.1363099 0.2400628 -5.9401e-02 11 0.1706119 0.2210393 -0.05042741 9.9878e-01 8.7602e-11 weaklyHypometh 1.0000e+00 2.1900e-08 weaklyHypometh 9.9991e-01 2.0646e-05 weaklyHypometh 1.0000e+00 5.1614e-03 weaklyHypometh -0.04019365 0.05525329 insignificant 0.98835 insignificant 0.0979567 0.2400628 -0.09689138 11 0.1268247 0.2210393 -0.09421458 1.0000e+00 3.4881e-14 weaklyHypometh 1.0000e+00 1.5166e-12 weaklyHypometh 1.0000e+00 1.6488e-08 weaklyHypometh 1.0000000 1.0992e-06 weaklyHypometh -0.0880830 2.0713e-03 weaklyHypometh 0.05329527 weaklyHypometh chr19 13153550 13154550 53018 ENSG00000213253 0.9246898 190 6 0.8407365 174 6 0.9060673 95 6 0.9187477 225 6 0.8833333 29 3 0.9017875 230 6 0.8569444 111 6 0.8409452 129 6 0.8722527 127 6 0.8997494 88 6 0.8911901 125 6 0.7691142 65 6 0.8524758 167 6 NA 0 0 0.8453349 102 6 0.8370370 43 4 0.9229167 73 6 0.84876812 146 6 0.9361111 88 6 0.9143292 222 6 0.9351852 46 6 0.7724610 87 6 0.8842893 114 6 0.8636549 53 6 0.8575758 63 6 0.9137958 204 6 0.8169192 44 6 0.8359788 52 6 0.9670093 131 6 0.97392539 238 6 0.9491163 210 6 0.8895121 293 6 0.3657343 143 6 0.6119720 145 6 0.0000000 1 0 0.2376709 122 6 0.609524 40 5 0.49481937 231 6 0.8601801 144 6 0.7913043 179 6 0.7929289 183 6 0.8586814 220 6 0.8485043 138 6 0.9253050 0.8534395 0.9028977 0.9194693 0.8825397 0.8999109 0.8597002 0.84372752 0.8830310 0.89636790 0.8990879 0.7703223 0.84966260 NA 0.8543227 0.83433275 0.9350529 0.8515758 0.92720459 0.9145350 0.9194591 0.77650969 0.8862720 0.85363490 0.8542088 0.9164211 0.8065576 0.8202738 0.9677873 0.97458760 0.94771647 0.8965855 0.3558479 0.6038436 NA 2.1984e-01 0.5867473 0.4780156 0.8587024 0.7932974 0.7959514 0.8587708 0.8389533 6 0.8851379 0.9120521 -2.5706e-02 6 0.8834637 0.9100595 -0.02659578 9.9601e-01 4.7783e-02 weaklyHypometh 1.00000000 1.0000e+00 insignificant 8.8082e-01 4.2756e-02 weaklyHypometh 1.0000000 1.000000 insignificant -0.01130993 0.587307 insignificant 1 insignificant 0.8851379 0.4384164 0.44715701 6 0.8834637 0.4509861 0.4324776 5.5822e-38 1.0000e+00 hypermethylated 3.4889e-36 1.0000e+00 hypermethylated 7.2955e-11 1.0000e+00 hypermethylated 2.8060e-09 1.0000e+00 hypermethylated 4.9036e-01 3.8448e-03 lowCoverage 5.5721e-02 lowCoverage 0.8851379 0.8275463 0.05846485 6 0.8834637 0.8277273 0.0557364 3.2790e-05 9.9730e-01 weaklyHypermeth 1.4904e-03 1.0000e+00 weaklyHypermeth 2.0690e-03 9.8522e-01 weaklyHypermeth 8.0156e-02 1.0000e+00 weaklyHypermeth 4.6656e-02 3.7811e-02 weaklyHypermeth 0.5376914 insignificant 0.9120521 0.4384164 0.47451341 6 0.9100595 0.4509861 0.4590734 6.6120e-27 1.0000e+00 hypermethylated 3.4800e-25 1.0000e+00 hypermethylated 6.3623e-11 1.0000e+00 hypermethylated 3.0297e-09 1.0000e+00 hypermethylated 0.5016652 3.2048e-03 lowCoverage 4.6446e-02 lowCoverage 0.9120521 0.8275463 8.5951e-02 6 0.9100595 0.8277273 0.08233220 3.5484e-05 9.9992e-01 weaklyHypermeth 2.3656e-03 1.0000e+00 weaklyHypermeth 2.8664e-03 9.9868e-01 weaklyHypermeth 1.5086e-01 1.0000e+00 insignificant 0.05796546 0.03053113 weaklyHypermeth 0.82901 insignificant 0.4384164 0.8275463 -0.38682993 6 0.4509861 0.8277273 -0.37674123 1.0000e+00 1.9154e-11 hypomethylated 1.0000e+00 6.4198e-10 hypomethylated 1.0000e+00 1.0178e-06 hypomethylated 1.0000000 4.4251e-05 hypomethylated -0.4436997 5.6641e-03 lowCoverage 0.10114411 lowCoverage chr19 13701950 13702950 53025 CACNA1A ENSG00000141837 0.7479485 368 11 0.6505715 387 13 0.6468916 202 11 0.6999484 260 11 0.6596293 138 10 0.7173644 620 13 0.6691366 246 11 0.6916055 248 11 0.5795166 164 13 0.6722335 179 11 0.7366212 519 13 0.6044855 109 7 0.7391422 261 12 0.7232143 110 11 0.7796998 212 11 0.4814660 69 4 0.4461935 450 6 0.64323688 287 13 0.6498838 265 11 0.7024434 420 13 0.7323103 119 9 0.8553877 125 10 0.6566142 237 11 0.7316835 123 10 0.7835815 162 10 0.7249636 480 13 0.7138730 158 9 0.4979592 71 5 0.7777367 319 13 0.69639070 527 13 0.7741581 532 13 0.7191879 563 13 0.5865904 316 13 0.6365708 238 11 0.4906989 386 11 0.5528904 74 5 0.601885 162 10 0.71050644 513 13 0.6350634 297 11 0.7564368 323 11 0.7399355 297 11 0.5943171 225 8 0.6536228 329 11 0.7460330 0.6839140 0.6934612 0.7870485 0.7178131 0.7268590 0.7282067 0.67094864 0.5845801 0.71465754 0.7362425 0.7134564 0.77702988 0.6840894 0.7848528 0.56681049 0.6486835 0.6742184 0.67468924 0.7210557 0.7732549 0.83621646 0.7282151 0.76144109 0.7735471 0.7257526 0.7095989 0.6711792 0.7717229 0.76604414 0.73428996 0.6931620 0.5614524 0.6194045 0.5247281 6.1448e-01 0.5847042 0.7050422 0.7347402 0.7683772 0.7765035 0.7108082 0.7092719 6 0.7165397 0.7540984 -2.9473e-02 13 0.6872900 0.6980527 -0.01076265 9.8799e-01 1.9372e-02 weaklyHypometh 1.00000000 7.5861e-01 insignificant 9.9829e-01 1.1962e-03 weaklyHypometh 1.0000000 0.293178 insignificant -0.05992560 0.068235 insignificant 1 insignificant 0.7167756 0.6121966 0.10069467 13 0.7006679 0.6079175 0.0927504 2.9771e-07 9.9142e-01 weaklyHypermeth 2.9187e-06 1.0000e+00 weaklyHypermeth 1.0862e-03 9.8518e-01 weaklyHypermeth 1.0247e-02 1.0000e+00 weaklyHypermeth 6.5538e-02 9.9553e-02 insignificant 6.4870e-01 insignificant 0.7167756 0.7382733 -0.01212726 11 0.7006679 0.6928459 0.0078220 3.8124e-01 1.2875e-01 insignificant 1.0000e+00 9.9315e-01 insignificant 8.7579e-01 6.3766e-02 insignificant 1.0000e+00 8.0717e-01 insignificant -1.3814e-02 7.1497e-01 insignificant 1.0000000 insignificant 0.7545455 0.6121966 0.13292527 13 0.7121993 0.6079175 0.1042818 7.2463e-09 9.9969e-01 weaklyHypermeth 1.0502e-07 1.0000e+00 weaklyHypermeth 2.2050e-07 1.0000e+00 weaklyHypermeth 6.4854e-06 1.0000e+00 weaklyHypermeth 0.1254636 8.1830e-03 weaklyHypermeth 9.8591e-02 weaklyHypermeth 0.7545455 0.7382733 2.1553e-02 11 0.7121993 0.6928459 0.01935343 6.8981e-03 5.0822e-01 weaklyHypermeth 1.7902e-01 1.0000e+00 insignificant 1.0395e-01 5.2481e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.04611208 0.27710461 insignificant 1.00000 insignificant 0.6121966 0.7382733 -0.12919600 11 0.6079175 0.6928459 -0.08492837 5.8166e-01 2.8445e-03 weaklyHypometh 1.0000e+00 2.0464e-02 weaklyHypometh 7.9338e-01 3.1130e-03 weaklyHypometh 1.0000000 3.4589e-02 weaklyHypometh -0.0793515 1.0247e-01 insignificant 0.64851285 insignificant chr19 13804750 13805750 53027 ZSWIM4 ENSG00000132003 0.0577888 1043 24 0.0436508 568 20 0.0699405 631 20 0.0119244 717 24 0.0252071 580 18 0.1588025 1207 20 0.0648673 757 20 0.0368254 475 20 0.0072538 661 20 0.0273610 655 20 0.0553504 714 20 0.0184928 545 20 0.0674363 479 20 0.0041928 378 11 0.1038176 847 20 0.0157884 627 20 0.0186606 255 10 0.05569563 1336 24 0.0096405 724 20 0.0849947 1150 20 0.0037879 268 19 0.0662073 204 14 0.0791558 612 20 0.0105556 349 20 0.0852941 264 20 0.0269419 907 20 0.0280544 702 19 0.0692629 318 20 0.1431882 623 20 0.05058120 669 20 0.0373060 891 20 0.0576898 1269 20 0.1012864 377 20 0.0231261 669 21 0.0000000 128 5 0.0070962 252 15 0.093887 381 14 0.11573412 1056 24 0.1216108 1083 24 0.1203652 1165 24 0.0406349 627 24 0.0558405 1682 24 0.0567357 904 24 0.0084353 0.0015570 0.0178799 0.0091462 0.0050807 0.0207837 0.0174846 0.02421752 0.0048799 0.02507940 0.0163714 0.0159655 0.03109827 0.0112554 0.0119385 0.02208088 0.0169413 0.0125066 0.00947939 0.0106714 0.0027248 0.07583845 0.0196248 0.00726612 0.0074798 0.0056988 0.0186391 0.0344884 0.0147552 0.00889673 0.00386548 0.0195943 0.0233393 0.0196605 0.0211298 4.9260e-03 0.0470261 0.0199812 0.0073089 0.0131466 0.0000000 0.0050325 0.0196426 19 0.0145049 0.0147121 3.9096e-04 20 0.0952859 0.0982254 -0.00293949 3.0461e-01 9.7298e-01 insignificant 1.00000000 1.0000e+00 insignificant 5.6046e-01 9.9665e-01 insignificant 1.0000000 1.000000 insignificant -0.00795087 0.575600 insignificant 1 insignificant 0.0143624 0.0241006 -0.00949046 20 0.0756781 0.1071516 -0.0314735 9.9852e-01 8.1064e-04 weaklyHypometh 1.0000e+00 4.2665e-02 weaklyHypometh 9.9997e-01 1.0048e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -9.9703e-03 6.7844e-01 insignificant 1.0000e+00 insignificant 0.0146607 0.0100751 0.00422994 20 0.1324913 0.1735165 -0.0410251 5.8217e-01 9.9932e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.4917e-01 9.9916e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -3.2153e-02 1.4723e-01 insignificant 1.0000000 insignificant 0.0141663 0.0241174 -0.01053402 20 0.0793645 0.1138486 -0.0344840 9.9975e-01 4.3672e-03 weaklyHypometh 1.0000e+00 2.1145e-01 insignificant 9.9999e-01 1.7554e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0020194 9.3512e-01 insignificant 1.0000e+00 insignificant 0.0147225 0.0100733 3.2278e-03 20 0.1043645 0.1735165 -0.06915193 8.5784e-01 9.5747e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7950e-01 9.8220e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02420198 0.27567771 insignificant 1.00000 insignificant 0.0234758 0.0095343 0.01248303 20 0.1026375 0.1339952 -0.03135767 3.4000e-03 1.0000e+00 weaklyHypermeth 2.6154e-01 1.0000e+00 insignificant 2.4117e-01 1.0000e+00 insignificant 1.0000000 1.0000e+00 insignificant -0.0221825 4.4101e-01 insignificant 1.00000000 insignificant chr19 13821450 13822450 53028 ENSG00000221627 0.0726082 541 28 0.1335705 417 28 0.0992499 417 28 0.0902901 583 22 0.0946376 315 8 0.0951530 623 25 0.1021404 660 29 0.1161911 519 30 0.1237156 471 25 0.0750794 306 24 0.1064776 777 30 0.1028996 353 24 0.0719678 324 25 0.2142857 33 5 0.0830980 390 25 0.1020747 361 19 0.0870621 265 14 0.08437799 464 26 0.1012982 785 29 0.0752703 785 28 0.1120893 297 18 0.1181354 312 10 0.0930574 497 28 0.0616667 319 25 0.1230726 273 15 0.1094490 869 30 0.0904534 654 29 0.0931741 216 17 0.0805222 557 23 0.10615078 635 29 0.1159376 605 29 0.1095351 799 28 0.0641093 432 25 0.0668757 420 26 0.1208625 278 7 0.0800000 262 22 0.063134 237 9 0.08498467 575 29 0.1392094 602 24 0.0824858 608 28 0.0925146 363 21 0.1101692 947 28 0.0873539 425 17 0.0954253 0.1071985 0.0741484 0.0998117 0.0903902 0.0892751 0.0867636 0.10434718 0.1136110 0.07960401 0.0965450 0.0850138 0.07716436 NA 0.0938174 0.09091029 0.1425264 0.0893199 0.07406801 0.0881750 0.0937834 0.08886577 0.1078619 0.07043158 0.0897490 0.0813193 0.0766974 0.0473711 0.1054862 0.08615415 0.08906467 0.0935090 0.0709217 0.0818022 0.0568205 8.4251e-02 0.0893114 0.0758089 0.1072970 0.1023571 0.1005671 0.0715794 0.0970982 3 0.1001172 0.0791045 4.6151e-03 28 0.1128702 0.0980999 0.01477032 1.8587e-01 9.6935e-01 insignificant 1.00000000 1.0000e+00 insignificant 4.7077e-01 9.8292e-01 insignificant 1.0000000 1.000000 insignificant 0.00046877 0.957350 insignificant 1 insignificant 0.1001278 0.0594644 0.05362149 22 0.1163974 0.0555684 0.0608289 1.6542e-08 1.0000e+00 weaklyHypermeth 1.7980e-07 1.0000e+00 weaklyHypermeth 1.6486e-05 1.0000e+00 weaklyHypermeth 2.2279e-04 1.0000e+00 weaklyHypermeth 2.1578e-02 8.2282e-02 insignificant 5.6358e-01 insignificant 0.0998827 0.1022418 -0.01838560 28 0.1074905 0.1053614 0.0021291 6.4985e-01 6.9955e-03 weaklyHypometh 1.0000e+00 1.7062e-01 insignificant 9.2847e-01 2.9800e-02 weaklyHypometh 1.0000e+00 5.9601e-01 insignificant -7.7419e-04 9.5204e-01 insignificant 1.0000000 insignificant 0.0791045 0.0594374 0.04964996 22 0.0980999 0.0538845 0.0442153 2.0235e-06 1.0000e+00 weaklyHypermeth 2.1300e-05 1.0000e+00 weaklyHypermeth 3.1217e-03 1.0000e+00 weaklyHypermeth 2.7626e-02 1.0000e+00 weaklyHypermeth 0.0211093 7.3368e-02 insignificant 4.7496e-01 insignificant 0.0791176 0.1025467 -2.5265e-02 28 0.1044289 0.1342207 -0.02979183 9.4938e-01 2.6648e-03 weaklyHypometh 1.0000e+00 8.8827e-02 weaklyHypometh 9.9756e-01 5.3237e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00124296 0.91772697 insignificant 1.00000 insignificant 0.0595184 0.1022418 -0.07262589 22 0.0592730 0.1053614 -0.04608841 1.0000e+00 2.0056e-07 weaklyHypometh 1.0000e+00 3.6465e-06 weaklyHypometh 1.0000e+00 1.4303e-03 weaklyHypometh 1.0000000 1.8337e-02 weaklyHypometh -0.0223523 1.3870e-01 insignificant 0.78362712 insignificant chr19 13821750 13822750 53029 ENSG00000221627 0.0230929 538 26 0.0720968 432 32 0.0653987 489 32 0.0237897 560 20 0.0457946 289 6 0.0289931 599 28 0.0511792 625 27 0.0550272 500 27 0.0808480 439 23 0.0216931 292 22 0.0573250 709 27 0.0587773 345 24 0.0137221 307 23 0.0000000 20 4 0.0188381 367 23 0.0355618 353 19 0.0253623 135 12 0.03731333 487 30 0.0508252 756 26 0.0278491 783 29 0.0776703 282 16 0.0446467 308 10 0.0331969 538 32 0.0046795 299 23 0.0583464 250 13 0.0497516 935 33 0.0475937 631 26 0.0389307 211 17 0.0214372 534 20 0.04347041 700 32 0.0501818 628 32 0.0587945 790 30 0.0106622 480 29 0.0040793 406 24 0.0126984 295 10 0.0000000 258 22 0.013160 187 7 0.03378685 561 31 0.1093654 624 27 0.0600651 595 26 0.0405642 336 19 0.0545243 955 31 0.0315710 389 15 0.0260391 0.0328144 0.0234954 0.0236039 0.0227702 0.0215747 0.0150483 0.02198830 0.0537789 0.01029557 0.0297192 0.0238657 0.01274014 NA 0.0230294 0.00731584 0.0823807 0.0285677 0.00884821 0.0254018 0.0426370 0.00508331 0.0258262 0.00027969 0.0182386 0.0179157 0.0180686 0.0057500 0.0334492 0.01361660 0.01019441 0.0210731 0.0051937 0.0050331 0.0039847 4.4506e-05 0.0238772 0.0044517 0.0411736 0.0278264 0.0231541 0.0074275 0.0272949 3 0.0509695 0.0440695 7.0238e-03 26 0.0652228 0.0441901 0.02103267 8.9444e-02 9.9883e-01 insignificant 1.00000000 1.0000e+00 insignificant 5.0220e-01 9.9851e-01 insignificant 1.0000000 1.000000 insignificant -0.00438392 0.547792 insignificant 1 insignificant 0.0509752 0.0059442 0.05521132 20 0.0670863 0.0075255 0.0595608 1.2928e-07 1.0000e+00 weaklyHypermeth 1.3327e-06 1.0000e+00 weaklyHypermeth 9.6467e-05 1.0000e+00 weaklyHypermeth 1.1623e-03 1.0000e+00 weaklyHypermeth 2.7277e-02 9.6477e-04 weaklyHypermeth 1.7228e-02 weaklyHypermeth 0.0506820 0.0676329 -0.01981354 26 0.0560006 0.0638381 -0.0078375 7.1802e-01 1.5867e-03 weaklyHypometh 1.0000e+00 6.8988e-02 weaklyHypometh 9.7912e-01 6.8633e-03 weaklyHypometh 1.0000e+00 2.2212e-01 insignificant -1.9544e-02 2.3022e-01 insignificant 1.0000000 insignificant 0.0440767 0.0059442 0.04651343 23 0.0454527 0.0075255 0.0379272 2.8808e-05 1.0000e+00 weaklyHypermeth 2.7177e-04 1.0000e+00 weaklyHypermeth 1.4227e-02 1.0000e+00 weaklyHypermeth 1.0617e-01 1.0000e+00 insignificant 0.0316605 5.3152e-04 weaklyHypermeth 1.1351e-02 weaklyHypermeth 0.0440767 0.0679545 -2.9941e-02 26 0.0467895 0.0913723 -0.04458276 9.9812e-01 3.2245e-04 weaklyHypometh 1.0000e+00 1.7625e-02 weaklyHypometh 9.9999e-01 2.4640e-02 weaklyHypometh 1.0000e+00 6.4841e-01 insignificant -0.01515973 0.34228777 insignificant 1.00000 insignificant 0.0059497 0.0676329 -0.07651921 20 0.0079816 0.0638381 -0.05585652 1.0000e+00 8.1116e-08 weaklyHypometh 1.0000e+00 1.6223e-06 weaklyHypometh 1.0000e+00 3.9599e-04 weaklyHypometh 1.0000000 6.2856e-03 weaklyHypometh -0.0468202 2.2257e-02 weaklyHypometh 0.23537458 insignificant chr19 13852150 13853150 53030 NANOS3 ENSG00000187556 0.1230335 268 9 0.0711378 303 9 0.0797315 408 10 0.1055833 313 10 0.0981735 398 10 0.1191230 400 10 0.1565060 435 10 0.1100112 289 10 0.1109410 553 10 0.1358974 409 10 0.1215946 257 10 0.1463590 417 10 0.0096154 371 10 0.1938312 101 6 0.0983729 373 10 0.1973869 389 10 0.0625385 361 10 0.08226099 315 9 0.0915229 212 6 0.1063309 367 10 0.2201541 142 10 0.0624469 262 9 0.1546281 353 10 0.1355274 209 10 0.1068523 151 8 0.0826915 394 10 0.1263131 229 10 0.0926794 176 9 0.0604043 202 7 0.09442234 420 10 0.0480830 368 10 0.1464060 381 10 0.0069873 369 10 0.0034483 178 9 0.0000000 150 5 0.0037879 87 4 0.062727 164 10 0.00000000 296 10 0.1407489 310 9 0.1047984 320 9 0.0696659 182 4 0.1258677 249 8 0.1181459 346 9 0.1821085 0.0722224 0.1289785 0.1712833 0.1287249 0.1562721 0.2101348 0.13095383 0.1452124 0.20056408 0.1691262 0.1976641 0.02341190 0.2079994 0.1162514 0.25921449 0.1213047 0.1123529 0.05895868 0.1601940 0.2988173 0.07309155 0.2114956 0.11863256 0.1317308 0.1034423 0.1101560 0.1474795 0.1170194 0.14660880 0.07393006 0.2124974 0.0064391 0.0082318 0.0032932 9.9467e-03 0.0396053 0.0000000 0.1907123 0.1040767 0.1017407 0.1666250 0.1686647 5 0.1001730 0.1195619 -1.0255e-03 10 0.0984377 0.1191676 -0.02072997 7.9092e-01 3.2107e-01 insignificant 1.00000000 1.0000e+00 insignificant 5.3893e-01 6.7879e-01 insignificant 1.0000000 1.000000 insignificant 0.00011354 0.994758 insignificant 1 insignificant 0.1001730 0.0096463 0.09731809 10 0.0984377 0.0417714 0.0566663 2.3679e-13 9.5812e-01 weaklyHypermeth 4.2283e-12 1.0000e+00 weaklyHypermeth 1.2529e-10 9.9961e-01 weaklyHypermeth 4.4746e-09 1.0000e+00 weaklyHypermeth 9.8172e-02 3.7722e-06 weaklyHypermeth 1.3007e-04 weaklyHypermeth 0.1002452 0.1449893 -0.00114205 9 0.1082814 0.1136902 -0.0054088 1.8643e-01 2.2899e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.4938e-02 9.2389e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -8.4782e-04 9.5727e-01 insignificant 1.0000000 insignificant 0.1195619 0.0096463 0.10121448 10 0.1191676 0.0417714 0.0773962 9.3987e-10 9.9997e-01 weaklyHypermeth 1.4685e-08 1.0000e+00 weaklyHypermeth 3.5665e-09 1.0000e+00 weaklyHypermeth 1.4266e-07 1.0000e+00 weaklyHypermeth 0.0980589 3.5330e-05 weaklyHypermeth 1.2618e-03 weaklyHypermeth 0.1194030 0.1449893 -5.1714e-03 9 0.1060844 0.1136902 -0.00760580 1.3587e-01 2.5375e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.0318e-01 5.4896e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00096136 0.95940610 insignificant 1.00000 insignificant 0.0080710 0.1449893 -0.12572154 9 0.0059485 0.1136902 -0.10774165 9.9467e-01 5.9654e-10 weaklyHypometh 1.0000e+00 1.5088e-08 weaklyHypometh 9.9952e-01 1.0969e-05 weaklyHypometh 1.0000000 3.4277e-04 weaklyHypometh -0.0990203 1.9695e-04 weaklyHypometh 0.00939453 weaklyHypometh chr19 14515850 14516850 53048 TECR ENSG00000099797 0.9190476 85 5 0.8654912 264 5 0.8269151 107 5 0.8611111 70 3 0.7842880 108 5 0.9107143 152 5 0.7561472 95 5 0.9174967 125 5 0.7459161 104 5 0.7140686 87 6 0.8253854 246 5 0.8910256 29 1 0.7431643 86 5 0.5549020 54 3 0.9213059 148 5 0.8000000 19 2 0.5952381 42 5 0.91208791 102 3 0.7700833 232 5 0.8982172 135 5 0.5982568 68 5 0.8261364 80 3 0.8090686 103 5 0.7999501 152 8 0.8070175 39 3 0.7861087 221 5 0.8393038 129 5 0.7797899 107 4 0.9672102 167 5 0.84350721 225 5 0.9138206 225 5 0.9517172 163 5 0.9465201 165 5 0.9590416 152 5 0.7500000 36 1 0.7750000 15 2 0.892835 152 5 0.88320956 215 5 0.7690476 118 5 0.6774671 100 3 0.8071429 73 3 0.7361111 66 3 0.9888889 59 3 0.9510106 0.8344604 0.8215440 0.8577445 0.9230410 0.9495118 0.6956224 0.87519908 0.8082215 0.80855034 0.8681649 0.8267847 0.86303201 0.9127311 0.8988126 0.96258993 0.7529291 0.9222468 0.92635363 0.9208408 0.8538764 0.88659254 0.8698424 0.91797899 0.9288148 0.8978506 0.9126749 0.7895641 0.9561336 0.91771466 0.94023666 0.9385364 0.9377553 0.9654327 0.7649768 8.6210e-01 0.9485965 0.9336701 0.9710175 0.9279748 0.9602775 0.9028777 0.9876099 3 0.8646288 0.8886242 -2.9901e-02 5 0.7135937 0.7936902 -0.08009644 9.4429e-01 4.1498e-02 weaklyHypometh 1.00000000 1.0000e+00 insignificant 8.2509e-01 1.7459e-01 insignificant 1.0000000 1.000000 insignificant -0.01619363 0.659594 lowCoverage 1 lowCoverage 0.8646288 0.9346939 -0.06765679 5 0.7135937 0.8645552 -0.1509614 9.9801e-01 1.1776e-03 weaklyHypometh 1.0000e+00 5.8882e-02 weaklyHypometh 9.8329e-01 1.2570e-02 weaklyHypometh 1.0000e+00 7.8560e-01 insignificant -5.7137e-02 2.1029e-01 lowCoverage 1.0000e+00 lowCoverage 0.8646288 0.9423077 -0.07574996 3 0.7135937 0.6684111 0.0451827 7.3198e-01 2.0053e-02 lowCoverage 1.0000e+00 3.8751e-01 lowCoverage 9.1565e-01 3.3112e-02 lowCoverage 1.0000e+00 6.1319e-01 lowCoverage 1.4899e-02 8.0562e-01 lowCoverage 1.0000000 lowCoverage 0.8886242 0.9346939 -0.03869446 5 0.7936902 0.8645552 -0.0708650 9.4302e-01 3.5952e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.4507e-01 1.0427e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0409438 3.8250e-01 lowCoverage 1.0000e+00 lowCoverage 0.8886242 0.9423077 -4.2256e-02 3 0.7936902 0.6684111 0.12527912 4.6727e-01 1.0349e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.5456e-01 7.1990e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.03109241 0.61948670 lowCoverage 1.00000 lowCoverage 0.9346939 0.9423077 -0.00604357 3 0.8645552 0.6684111 0.19614411 6.4789e-01 8.2311e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.7764e-01 6.7579e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage 0.0720362 2.9352e-01 lowCoverage 1.00000000 lowCoverage chr19 15181950 15182950 53052 NOTCH3 ENSG00000074181 0.8716501 190 5 0.7688725 80 6 0.6990741 63 5 0.7833551 126 3 0.6706349 26 2 0.9239951 153 6 0.6755952 55 5 0.9044312 69 4 0.7373219 51 5 0.7351852 45 5 0.9068927 222 6 0.6444444 34 3 0.8939394 95 6 0.6500000 24 2 0.6861111 62 5 0.5625000 14 1 0.8777778 27 3 0.77167756 221 3 0.8603642 171 6 0.7278083 159 4 0.7579136 61 6 0.5629630 32 3 0.6860871 66 5 0.8327922 47 4 0.7838308 138 4 0.9300366 110 5 0.7032468 61 4 0.6000000 22 2 0.8567460 108 6 0.92531566 128 6 0.8192414 119 6 0.8415410 142 5 0.5711485 128 6 0.5591666 154 6 0.6000000 81 5 0.2000000 26 3 0.627121 58 5 0.49567100 200 5 0.6251126 84 4 0.7474136 110 5 0.7844697 108 3 0.7829630 121 3 0.8507371 97 3 0.8809345 0.6969635 0.7777778 0.8346551 0.5617284 0.9035594 0.6236772 0.87103175 0.7332858 0.83024691 0.9076212 0.4506173 0.83417508 0.7172232 0.7675926 0.65064966 0.7807305 0.7341644 0.81346635 0.7309473 0.7173340 0.64197531 0.8031172 0.86189274 0.6820580 0.8997558 0.6637205 0.5185757 0.7835097 0.90392116 0.82571982 0.8137339 0.5170401 0.5024527 0.5795363 3.0817e-01 0.5407509 0.3609909 0.7438527 0.7897690 0.7946128 0.7770919 0.8406481 0 0.8113408 0.7899322 1.9495e-02 5 0.8268201 0.8170008 0.00981934 3.5250e-01 7.8879e-01 insignificant 1.00000000 1.0000e+00 insignificant 6.4091e-01 5.0489e-01 insignificant 1.0000000 1.000000 insignificant -0.00739464 0.859983 lowCoverage 1 lowCoverage 0.8113408 0.3647604 0.40582859 6 0.8268201 0.5342364 0.2925837 1.1088e-16 8.1241e-01 hypermethylated 2.5785e-15 1.0000e+00 hypermethylated 1.2945e-04 7.4067e-01 hypermethylated 1.5410e-03 1.0000e+00 hypermethylated 2.5873e-01 8.1734e-03 lowCoverage 9.8474e-02 lowCoverage 0.8113408 0.7384615 0.04545185 4 0.8268201 0.7825454 0.0442747 1.1712e-02 2.8377e-01 lowCoverage 2.5461e-01 1.0000e+00 lowCoverage 6.3701e-01 1.8542e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.4423e-03 8.3620e-01 lowCoverage 1.0000000 lowCoverage 0.7899322 0.3647604 0.42306734 5 0.8170008 0.5342364 0.2827644 2.7466e-13 8.5658e-01 hypermethylated 5.6054e-12 1.0000e+00 hypermethylated 3.1482e-04 7.2591e-01 hypermethylated 3.7038e-03 1.0000e+00 hypermethylated 0.2661249 6.5793e-03 lowCoverage 8.4351e-02 lowCoverage 0.7899322 0.7384615 3.9462e-02 4 0.8170008 0.7825454 0.03445539 1.1423e-01 2.9412e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 4.9361e-01 2.1987e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.01683698 0.74459952 lowCoverage 1.00000 lowCoverage 0.3647604 0.7384615 -0.48201295 4 0.5342364 0.7825454 -0.24830898 5.4166e-01 2.4708e-10 lowCoverage 1.0000e+00 6.5021e-09 lowCoverage 9.1921e-01 3.3004e-05 lowCoverage 1.0000000 7.8582e-04 lowCoverage -0.2492879 1.0388e-02 lowCoverage 0.15054770 lowCoverage chr19 15269650 15270650 53057 BRD4 ENSG00000141867 0.6575989 201 7 0.7489343 150 7 0.5529078 114 7 0.6173456 150 7 0.6703907 88 7 0.6967582 314 7 0.5810729 104 4 0.6951948 131 7 0.4487011 95 4 0.6362637 80 4 0.6008086 245 7 0.6086601 56 4 0.5958874 126 7 0.7500000 23 1 0.6227106 112 4 0.7219955 44 4 0.4761905 41 4 0.65173372 223 7 0.6167476 119 7 0.6269427 251 7 0.6597403 29 2 0.4975000 59 3 0.6248731 143 7 0.6372549 39 3 0.7724868 35 2 0.6225688 173 7 0.4684028 54 2 0.4285714 26 3 0.7704518 134 7 0.61830651 179 7 0.6538268 183 7 0.6333563 327 7 0.5481244 153 7 0.5755625 112 7 0.5997632 112 7 0.7550505 33 3 0.660342 86 7 0.57575327 188 7 0.6128942 183 7 0.6488984 222 7 0.6661616 178 7 0.6999571 194 7 0.6717991 171 7 0.7419317 0.6995910 0.6219756 0.7497053 0.7937339 0.7087339 0.7167370 0.73515317 0.6004570 0.74980112 0.6793527 0.7616584 0.71992935 0.7687466 0.7280164 0.65517577 0.5991820 0.7451438 0.66175024 0.7543461 0.6445255 0.75676570 0.7276239 0.72876744 0.7095225 0.7395687 0.6303974 0.7177914 0.8035274 0.71658654 0.75635171 0.7060801 0.7103864 0.7060406 0.6555344 7.3466e-01 0.6876278 0.7085289 0.7237011 0.7329349 0.7046488 0.7425155 0.6837780 2 0.6715411 0.7125272 -1.5070e-02 7 0.6798672 0.6235445 0.05632270 6.8671e-01 4.5040e-01 insignificant 1.00000000 1.0000e+00 insignificant 3.3992e-01 7.7505e-01 insignificant 1.0000000 1.000000 insignificant 0.01323062 0.711665 lowCoverage 1 lowCoverage 0.6714232 0.6681287 0.01630540 7 0.6711006 0.6464175 0.0246831 3.3177e-01 9.4890e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.9804e-01 9.6250e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7429e-03 7.9235e-01 insignificant 1.0000e+00 insignificant 0.6710526 0.6592827 -0.02672746 7 0.6241150 0.6674024 -0.0432874 7.8013e-01 7.7910e-02 insignificant 1.0000e+00 7.7575e-01 insignificant 3.8344e-01 1.9336e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -3.1100e-02 1.8724e-01 insignificant 1.0000000 insignificant 0.7124183 0.6681287 0.02844087 7 0.6077376 0.6464175 -0.0386799 9.5261e-02 9.0218e-01 insignificant 4.2910e-01 1.0000e+00 insignificant 2.3459e-01 9.3255e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0034877 9.3764e-01 lowCoverage 1.0000e+00 lowCoverage 0.7135569 0.6592827 -7.8738e-03 7 0.6374144 0.6674024 -0.02998801 3.7086e-01 2.8848e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.2836e-01 5.6216e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04433047 0.20996718 lowCoverage 1.00000 lowCoverage 0.6666667 0.6592827 -0.04546215 7 0.5959057 0.6674024 -0.07149667 8.8344e-01 1.7241e-02 weaklyHypometh 1.0000e+00 1.0386e-01 insignificant 9.8438e-01 9.2816e-02 insignificant 1.0000000 5.2326e-01 insignificant -0.0408427 2.7442e-01 insignificant 1.00000000 insignificant chr19 15269750 15270750 53058 BRD4 ENSG00000141867 0.6575989 201 7 0.7489343 150 7 0.5529078 114 7 0.6173456 150 7 0.6703907 88 7 0.6967582 314 7 0.5810729 104 4 0.6951948 131 7 0.4487011 95 4 0.6362637 80 4 0.6008086 245 7 0.6086601 56 4 0.5958874 126 7 0.7500000 23 1 0.6227106 112 4 0.7219955 44 4 0.4761905 41 4 0.65173372 223 7 0.6167476 119 7 0.6269427 251 7 0.6597403 29 2 0.4975000 59 3 0.6248731 143 7 0.6372549 39 3 0.7724868 35 2 0.6225688 173 7 0.4684028 54 2 0.4285714 26 3 0.7704518 134 7 0.61830651 179 7 0.6538268 183 7 0.6333563 327 7 0.5481244 153 7 0.5755625 112 7 0.5997632 112 7 0.7550505 33 3 0.660342 86 7 0.57575327 188 7 0.6128942 183 7 0.6488984 222 7 0.6661616 178 7 0.6999571 194 7 0.6717991 171 7 0.7419317 0.6995910 0.6219756 0.7497053 0.7937339 0.7087339 0.7167370 0.73515317 0.6004570 0.74980112 0.6793527 0.7616584 0.71992935 0.7687466 0.7280164 0.65517577 0.5991820 0.7451438 0.66175024 0.7543461 0.6445255 0.75676570 0.7276239 0.72876744 0.7095225 0.7395687 0.6303974 0.7177914 0.8035274 0.71658654 0.75635171 0.7060801 0.7103864 0.7060406 0.6555344 7.3466e-01 0.6876278 0.7085289 0.7237011 0.7329349 0.7046488 0.7425155 0.6837780 2 0.6715411 0.7125272 -1.5070e-02 7 0.6798672 0.6235445 0.05632270 6.8671e-01 4.5040e-01 insignificant 1.00000000 1.0000e+00 insignificant 3.3992e-01 7.7505e-01 insignificant 1.0000000 1.000000 insignificant 0.01323062 0.711665 lowCoverage 1 lowCoverage 0.6714232 0.6681287 0.01630540 7 0.6711006 0.6464175 0.0246831 3.3177e-01 9.4890e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.9804e-01 9.6250e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7429e-03 7.9235e-01 insignificant 1.0000e+00 insignificant 0.6710526 0.6592827 -0.02672746 7 0.6241150 0.6674024 -0.0432874 7.8013e-01 7.7910e-02 insignificant 1.0000e+00 7.7575e-01 insignificant 3.8344e-01 1.9336e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -3.1100e-02 1.8724e-01 insignificant 1.0000000 insignificant 0.7124183 0.6681287 0.02844087 7 0.6077376 0.6464175 -0.0386799 9.5261e-02 9.0218e-01 insignificant 4.2910e-01 1.0000e+00 insignificant 2.3459e-01 9.3255e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0034877 9.3764e-01 lowCoverage 1.0000e+00 lowCoverage 0.7135569 0.6592827 -7.8738e-03 7 0.6374144 0.6674024 -0.02998801 3.7086e-01 2.8848e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.2836e-01 5.6216e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04433047 0.20996718 lowCoverage 1.00000 lowCoverage 0.6666667 0.6592827 -0.04546215 7 0.5959057 0.6674024 -0.07149667 8.8344e-01 1.7241e-02 weaklyHypometh 1.0000e+00 1.0386e-01 insignificant 9.8438e-01 9.2816e-02 insignificant 1.0000000 5.2326e-01 insignificant -0.0408427 2.7442e-01 insignificant 1.00000000 insignificant chr19 15811850 15812850 53064 UCA1 ENSG00000214049 0.7525782 150 6 0.5112460 100 6 0.5222222 25 3 0.7233730 138 6 0.7172161 33 3 0.6407461 128 5 0.5615079 63 6 0.6761905 75 5 0.4828042 72 5 0.5651099 46 4 0.7650613 106 6 0.5555556 21 3 0.4015152 104 6 0.4228671 86 6 0.4208093 53 6 0.7500000 5 0 0.2500000 20 1 0.61181560 159 6 0.6345029 78 5 0.6379902 102 6 0.6666667 19 0 0.8333333 6 0 0.6518519 102 6 0.5671296 38 3 0.7996626 70 5 0.5839420 134 5 0.7939815 34 5 0.6428571 17 0 0.6062092 81 6 0.50827934 152 6 0.6260256 121 6 0.6491252 109 6 0.4603393 100 6 0.4875421 83 5 0.4276498 72 3 0.4583333 45 3 0.378568 88 6 0.61308480 162 6 0.6792929 88 6 0.6551011 139 6 0.6524548 193 6 0.5661172 56 4 0.7184368 152 6 0.7338226 0.5673684 0.4639456 0.7022498 0.6654108 0.6214245 0.4875283 0.66020408 0.4546485 0.54968603 0.6586124 0.5782313 0.37331036 0.3888889 0.4087986 0.67968117 NA 0.5349206 0.62441819 0.6024610 0.6734694 0.79591837 0.6253968 0.51672336 0.7829307 0.5467802 0.7621882 0.5748299 0.5716287 0.47597413 0.58230769 0.6161598 0.4534380 0.4496392 0.4165152 4.4728e-01 0.3727858 0.5867257 0.6557205 0.6142176 0.6403937 0.6184506 0.7021357 0 0.6288462 0.6930917 -3.2577e-02 5 0.6531714 0.6845611 -0.03138975 9.1029e-01 6.1742e-02 insignificant 1.00000000 1.0000e+00 insignificant 9.8997e-01 2.2431e-02 weaklyHypometh 1.0000000 1.000000 insignificant -0.08059976 0.066253 lowCoverage 1 lowCoverage 0.6278920 0.5381818 0.11384339 6 0.5953666 0.5046687 0.0906979 1.4886e-04 6.8875e-01 weaklyHypermeth 1.1363e-03 1.0000e+00 weaklyHypermeth 7.8468e-03 9.2079e-01 weaklyHypermeth 6.1786e-02 1.0000e+00 weaklyHypermeth 1.0924e-01 2.7111e-02 lowCoverage 2.3781e-01 lowCoverage 0.6278920 0.7022293 -0.06349531 6 0.5953666 0.6621407 -0.0667741 7.3448e-01 2.0753e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.8574e-01 2.0570e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -7.4125e-02 7.9350e-02 lowCoverage 0.8532225 lowCoverage 0.6927438 0.5381818 0.14452763 5 0.6319880 0.5046687 0.1273193 4.1059e-06 8.8618e-01 weaklyHypermeth 4.1059e-05 1.0000e+00 weaklyHypermeth 1.8532e-04 9.9547e-01 weaklyHypermeth 2.2600e-03 1.0000e+00 weaklyHypermeth 0.1898359 7.9167e-04 lowCoverage 1.4937e-02 lowCoverage 0.6927438 0.7022293 -1.7876e-02 5 0.6319880 0.6621407 -0.03015268 1.6783e-01 2.1823e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.3316e-01 3.4942e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00647476 0.86780522 lowCoverage 1.00000 lowCoverage 0.5381818 0.7022293 -0.17928695 6 0.5046687 0.6621407 -0.15747194 9.8227e-01 2.3616e-04 weaklyHypometh 1.0000e+00 2.2707e-03 weaklyHypometh 9.9406e-01 2.2194e-03 weaklyHypometh 1.0000000 2.6421e-02 weaklyHypometh -0.1833611 1.5737e-03 lowCoverage 0.04628405 lowCoverage chr19 16893050 16894050 53087 ENSG00000223132 0.8886213 255 7 0.9230769 126 3 0.7364672 61 3 0.8880379 244 7 1.0000000 11 2 0.9115260 260 7 0.8888889 19 2 0.8490128 109 3 0.8333333 44 3 0.8981481 48 3 0.8874269 130 3 0.8333333 7 0 0.9540653 141 3 0.8952381 66 3 0.8575851 86 3 0.5000000 2 0 1.0000000 2 0 0.74596678 208 7 0.8546919 97 3 0.9894387 157 5 0.8809524 34 3 0.8432540 58 3 0.9168831 82 3 1.0000000 41 3 0.9280303 30 3 0.9610933 227 7 0.8643939 29 3 0.8666667 32 3 0.9270440 109 3 0.83693771 238 5 0.9355070 182 3 0.9295704 176 7 0.8303507 132 3 1.0000000 17 2 0.6666667 3 0 0.4572488 127 4 0.821027 69 3 0.80490617 159 7 0.9283191 154 7 0.8897435 204 7 0.9493593 173 7 0.9031156 172 7 0.9070071 208 7 0.9147108 0.9627792 0.7831541 0.9258060 1.0000000 0.9038164 0.8602151 0.92064741 0.8548387 0.93637993 0.9228919 0.7903226 0.96465163 0.8940092 0.9159093 0.86292346 0.9645256 0.8905325 0.91484820 0.9789230 0.9423963 0.89957757 0.9427175 1.00000000 0.9417155 0.9503061 0.8763196 0.9354839 0.9598296 0.95286016 0.94648816 0.9065377 0.8940971 1.0000000 0.9535975 7.9231e-01 0.8331137 0.9750657 0.9678560 0.9270444 0.9657146 0.9433304 0.9910394 0 0.9107574 0.9385113 -2.4549e-02 3 0.8768591 0.9232085 -0.04634936 9.9157e-01 2.5763e-02 lowCoverage 1.00000000 8.5875e-01 lowCoverage 9.8260e-01 5.3462e-02 lowCoverage 1.0000000 1.000000 lowCoverage -0.04078480 0.166480 lowCoverage 1 lowCoverage 0.9107574 0.8086785 0.04572511 3 0.8768591 0.7183801 0.1584791 1.8367e-04 9.8921e-01 lowCoverage 1.3810e-03 1.0000e+00 lowCoverage 1.0748e-01 9.1536e-01 lowCoverage 6.0384e-01 1.0000e+00 lowCoverage 1.0338e-01 2.3747e-01 lowCoverage 1.0000e+00 lowCoverage 0.9107574 0.9341383 -0.03870248 3 0.8768591 0.9092004 -0.0323413 8.0069e-01 2.5547e-02 lowCoverage 1.0000e+00 4.4619e-01 lowCoverage 6.8936e-01 1.1156e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -4.8766e-02 8.4380e-02 lowCoverage 0.8976614 lowCoverage 0.9385113 0.8086785 0.05705424 3 0.9232085 0.7183801 0.2048284 3.1235e-10 9.9989e-01 lowCoverage 5.2059e-09 1.0000e+00 lowCoverage 1.1303e-02 9.9794e-01 lowCoverage 8.7622e-02 1.0000e+00 lowCoverage 0.1441611 1.1353e-01 lowCoverage 6.6784e-01 lowCoverage 0.9385113 0.9341383 -1.4461e-02 3 0.9232085 0.9092004 0.01400804 7.5885e-02 5.0019e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 1.2007e-01 6.9767e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.00798120 0.65908073 lowCoverage 1.00000 lowCoverage 0.8086785 0.9341383 -0.12259746 7 0.7183801 0.9092004 -0.19082038 9.9997e-01 6.4693e-07 weaklyHypometh 1.0000e+00 1.1350e-05 weaklyHypometh 9.9878e-01 1.2374e-02 weaklyHypometh 1.0000000 1.0398e-01 insignificant -0.1521423 9.8517e-02 lowCoverage 0.63491662 lowCoverage chr19 17079050 17080050 53091 MYO9B ENSG00000099331 0.9353927 290 6 0.5585034 221 6 0.6196084 179 6 0.8499455 356 6 0.8363003 92 6 0.7608618 379 6 0.8940375 164 6 0.8634030 200 6 0.8461249 184 6 0.6654040 140 5 0.8012968 273 6 0.8287970 92 4 0.7774297 204 5 0.8367965 67 5 0.7827059 166 6 0.7107143 58 5 0.5600000 61 4 0.62462795 338 6 0.8100213 176 6 0.7793625 237 6 0.8759019 81 6 0.4191117 163 5 0.8163174 191 6 0.7143843 75 6 0.5516369 90 6 0.8057906 267 6 0.5310815 147 6 0.5964052 79 5 0.7469096 198 6 0.74472015 264 6 0.7927138 280 6 0.8664644 322 6 0.1615726 288 6 0.0402930 171 6 0.5000000 318 4 0.2000000 59 3 0.158633 205 6 0.26123441 296 6 0.6807382 296 6 0.6653831 291 6 0.5918934 206 6 0.6614029 264 6 0.6216503 278 6 0.8562695 0.6723660 0.6321083 0.8520351 0.8456250 0.8689871 0.8021256 0.68304933 0.7620318 0.82182039 0.7866722 0.6365759 0.55131201 0.7360982 0.7058255 0.69264859 0.7220485 0.5032228 0.72898522 0.7658640 0.9360445 0.38582306 0.8272535 0.74492099 0.6796359 0.7255384 0.6608113 0.7155432 0.6240119 0.67584444 0.66540808 0.8815467 0.0742707 0.0216171 0.0746367 1.0950e-01 0.0278512 0.1174977 0.7112243 0.5266095 0.6292174 0.5418198 0.5565522 3 0.7665721 0.7484919 2.2405e-02 6 0.7463420 0.6733306 0.07301141 2.1588e-01 9.9870e-01 insignificant 1.00000000 1.0000e+00 insignificant 1.8893e-01 9.8114e-01 insignificant 1.0000000 1.000000 insignificant 0.06194688 0.220391 insignificant 1 insignificant 0.7644143 0.1436051 0.66206045 6 0.7217344 0.2376430 0.4840914 1.9748e-46 9.9913e-01 hypermethylated 1.7953e-44 1.0000e+00 hypermethylated 4.3558e-11 9.9915e-01 hypermethylated 1.7423e-09 1.0000e+00 hypermethylated 5.4678e-01 1.2243e-04 hypermethylated 3.2220e-03 hypermethylated 0.7664310 0.6666667 0.10118236 6 0.8134010 0.5186042 0.2947969 1.6241e-04 9.9917e-01 weaklyHypermeth 6.7672e-03 1.0000e+00 weaklyHypermeth 1.2073e-05 1.0000e+00 weaklyHypermeth 1.2073e-03 1.0000e+00 weaklyHypermeth 1.2285e-01 4.3699e-04 weaklyHypermeth 0.0449803 weaklyHypermeth 0.7469541 0.1436051 0.64257682 6 0.6120194 0.2376430 0.3743765 6.5392e-30 8.5515e-01 hypermethylated 4.0870e-28 1.0000e+00 hypermethylated 1.0288e-09 9.5417e-01 hypermethylated 4.6762e-08 1.0000e+00 hypermethylated 0.4848310 9.7249e-05 hypermethylated 2.7785e-03 hypermethylated 0.7496471 0.6666667 7.6368e-02 6 0.5995194 0.5186042 0.08091523 3.4843e-02 9.8556e-01 weaklyHypermeth 6.4526e-01 1.0000e+00 insignificant 7.9158e-03 9.9944e-01 weaklyHypermeth 3.2983e-01 1.0000e+00 insignificant 0.06090621 0.20104118 insignificant 1.00000 insignificant 0.1430712 0.6671664 -0.56823567 6 0.2001634 0.5926905 -0.39252712 9.9827e-01 1.1539e-21 hypomethylated 1.0000e+00 8.8758e-20 hypomethylated 9.9962e-01 4.9145e-07 hypomethylated 1.0000000 2.4572e-05 hypomethylated -0.4239248 8.0421e-04 hypomethylated 0.02915408 hypomethylated chr19 17107250 17108250 53092 MYO9B ENSG00000099331 0.0474451 579 11 0.0045523 463 11 0.0492336 510 11 0.0298476 513 11 0.0294259 269 11 0.0724904 702 11 0.0424761 461 11 0.0156615 441 11 0.0339797 667 11 0.0311817 538 11 0.0669740 425 11 0.0640496 372 11 0.0124551 636 11 0.0408399 111 6 0.0233105 585 11 0.0656048 340 11 0.0282630 369 11 0.03476874 641 11 0.0128788 229 11 0.0339053 680 11 0.0491095 160 10 0.0000000 388 11 0.0386471 509 11 0.0231978 199 11 0.0460675 283 11 0.0225706 600 11 0.0662475 334 11 0.0572129 190 11 0.0157665 393 11 0.01497712 682 11 0.0095323 526 11 0.0530232 834 11 0.0039916 468 11 0.0089258 264 11 0.1000000 336 7 0.0000000 186 11 0.000000 200 11 0.00239234 529 11 0.0393466 588 11 0.0091034 630 11 0.0185963 565 11 0.0180833 591 11 0.0509539 554 11 0.0444577 0.0050581 0.0483336 0.0331983 0.0276876 0.0601634 0.0397122 0.01597501 0.0336286 0.03633033 0.0874378 0.0608227 0.01247696 0.0286455 0.0250769 0.04486168 0.0244064 0.0291040 0.01449893 0.0334105 0.0580496 0.00000000 0.0380494 0.04157846 0.0321323 0.0221948 0.0461158 0.0255210 0.0139488 0.01907414 0.01283622 0.0617698 0.0081210 0.0098535 0.0386068 0.0000e+00 0.0000000 0.0014028 0.0282230 0.0099293 0.0110829 0.0143335 0.0381814 11 0.0356731 0.0288405 7.3140e-03 11 0.0326327 0.0618087 -0.02917607 1.3302e-02 9.1961e-01 weaklyHypermeth 1.00000000 1.0000e+00 insignificant 6.5318e-03 9.8627e-01 weaklyHypermeth 0.6244393 1.000000 insignificant 0.00393785 0.606702 insignificant 1 insignificant 0.0356806 0.0146243 0.01991773 11 0.0353520 0.0185676 0.0167845 7.2623e-08 9.9958e-01 weaklyHypermeth 7.7259e-07 1.0000e+00 weaklyHypermeth 7.6534e-10 1.0000e+00 weaklyHypermeth 2.3192e-08 1.0000e+00 weaklyHypermeth 1.7749e-02 3.3274e-01 insignificant 1.0000e+00 insignificant 0.0356880 0.0191257 0.01624883 11 0.0385659 0.0270140 0.0115518 1.9619e-03 9.6139e-01 weaklyHypermeth 5.4497e-02 1.0000e+00 weaklyHypermeth 4.3860e-03 9.4586e-01 weaklyHypermeth 1.4620e-01 1.0000e+00 insignificant 9.7505e-03 3.0899e-01 insignificant 1.0000000 insignificant 0.0286668 0.0146243 0.01284280 11 0.0461261 0.0185676 0.0275586 1.1753e-04 9.9903e-01 weaklyHypermeth 1.0220e-03 1.0000e+00 weaklyHypermeth 1.0235e-05 1.0000e+00 weaklyHypermeth 1.8608e-04 1.0000e+00 weaklyHypermeth 0.0138110 4.5404e-01 insignificant 1.0000e+00 insignificant 0.0284928 0.0191257 8.1199e-03 11 0.0275921 0.0270140 0.00057809 1.5588e-01 3.3265e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.9895e-01 2.3222e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00581264 0.57075217 insignificant 1.00000 insignificant 0.0146317 0.0191257 -0.00464644 11 0.0202555 0.0270140 -0.00675851 9.9739e-01 3.5463e-04 weaklyHypometh 1.0000e+00 3.2535e-03 weaklyHypometh 1.0000e+00 2.3617e-04 weaklyHypometh 1.0000000 4.2940e-03 weaklyHypometh -0.0079984 6.6942e-01 insignificant 1.00000000 insignificant chr19 17264250 17265250 53093 ANKLE1 ENSG00000160117 0.2544419 779 25 0.1854985 847 27 0.2657218 957 27 0.2445233 947 23 0.2566604 565 24 0.2803344 1204 26 0.2280967 753 23 0.2784829 717 24 0.2999648 863 24 0.3119527 1173 24 0.2977603 941 24 0.2089600 995 24 0.3637900 964 24 0.1931389 629 20 0.2421156 1221 24 0.1934907 983 20 0.2317460 483 16 0.30476555 1003 23 0.2737042 820 24 0.2879355 900 27 0.3024851 445 24 0.2892761 747 23 0.2284459 599 26 0.2123297 596 25 0.3415364 535 21 0.2476814 1117 27 0.2792129 776 24 0.2479196 327 21 0.2620192 735 25 0.24175550 1070 26 0.3059299 1090 26 0.2594745 1035 24 0.2513987 685 27 0.2291412 571 24 0.2072192 357 26 0.2582418 302 19 0.275382 508 25 0.25513687 852 27 0.2653263 1020 23 0.3458089 1055 26 0.2646628 790 23 0.2569923 883 23 0.2680531 1016 23 0.1367988 0.1225549 0.1390151 0.1279107 0.1448931 0.1378432 0.1265962 0.13405081 0.1445464 0.15040461 0.1366556 0.1362184 0.14026277 0.1335699 0.1382904 0.11984570 0.1320882 0.1603118 0.12934262 0.1412779 0.1369519 0.13965053 0.1360338 0.14015386 0.1503832 0.1336875 0.1467706 0.1602215 0.1226771 0.13477479 0.12684706 0.1397084 0.1127378 0.1208838 0.1301951 1.3485e-01 0.1290448 0.1161230 0.1413836 0.1548759 0.1554657 0.1441022 0.1609170 19 0.1424143 0.1537528 5.2805e-04 24 0.2520114 0.2527936 -0.00078218 5.6841e-01 8.7597e-01 insignificant 1.00000000 1.0000e+00 insignificant 6.9652e-01 9.4161e-01 insignificant 1.0000000 1.000000 insignificant -0.00801798 0.590946 insignificant 1 insignificant 0.1423738 0.1780153 0.01838121 24 0.2549010 0.2341986 0.0207023 1.1235e-04 9.3054e-01 weaklyHypermeth 8.9165e-04 1.0000e+00 weaklyHypermeth 7.6995e-03 9.9824e-01 weaklyHypermeth 6.1107e-02 1.0000e+00 weaklyHypermeth 1.4068e-02 3.3615e-01 insignificant 1.0000e+00 insignificant 0.1419213 0.1792988 -0.01705172 23 0.2484922 0.2595342 -0.0110420 9.9781e-01 7.4727e-07 weaklyHypometh 1.0000e+00 1.2299e-04 weaklyHypometh 9.9880e-01 1.3210e-04 weaklyHypometh 1.0000e+00 1.4678e-02 weaklyHypometh -2.0014e-02 3.3516e-01 insignificant 1.0000000 insignificant 0.1535829 0.1780153 0.01755626 26 0.2390599 0.2341986 0.0048613 1.1745e-02 9.9824e-01 weaklyHypermeth 6.5614e-02 1.0000e+00 weaklyHypermeth 7.0260e-02 9.9993e-01 insignificant 4.1329e-01 1.0000e+00 insignificant 0.0220857 1.4898e-01 insignificant 8.4646e-01 insignificant 0.1529360 0.1794710 -1.7121e-02 23 0.2315536 0.2813126 -0.04975901 9.9999e-01 1.0338e-04 weaklyHypometh 1.0000e+00 9.3982e-03 weaklyHypometh 1.0000e+00 5.3359e-03 weaklyHypometh 1.0000e+00 2.6680e-01 insignificant -0.01199648 0.55918123 insignificant 1.00000 insignificant 0.1766329 0.1792988 -0.03894453 23 0.2221561 0.2595342 -0.03737819 1.0000e+00 5.7354e-08 weaklyHypometh 1.0000e+00 1.2203e-06 weaklyHypometh 1.0000e+00 2.5352e-05 weaklyHypometh 1.0000000 6.3379e-04 weaklyHypometh -0.0340821 1.2167e-01 insignificant 0.74191476 insignificant chr19 17651450 17652450 53100 UNC13A ENSG00000130477 0.0832332 763 27 0.1006849 660 27 0.1279823 980 27 0.0438663 752 26 0.1262222 550 27 0.1357603 1353 27 0.0936360 769 27 0.1277141 891 27 0.1292945 1075 27 0.1548410 1029 27 0.1939065 914 26 0.2038286 1058 26 0.0258234 1043 27 0.1583554 668 17 0.0857181 1425 27 0.1511562 891 24 0.0765105 387 21 0.05763489 940 27 0.0250020 805 26 0.1009473 1153 27 0.1467627 344 26 0.0178381 768 27 0.1071106 664 27 0.1004416 606 29 0.0363767 390 26 0.1672268 1213 27 0.1060677 823 26 0.0867582 694 23 0.1252538 640 26 0.03143447 1278 27 0.0902683 1166 27 0.1481102 1583 27 0.0345018 676 27 0.0289334 491 27 0.0736842 514 18 0.0696886 194 11 0.048025 595 22 0.04311797 896 27 0.0443475 738 27 0.0294310 910 26 0.0764453 593 26 0.0247989 822 24 0.0229260 788 27 0.0644432 0.0845581 0.1170573 0.0420623 0.0647171 0.1063934 0.0862786 0.08399447 0.0690669 0.12445997 0.1559956 0.1653413 0.02014105 0.1016149 0.0701807 0.12024321 0.0623093 0.0556179 0.02519703 0.0305955 0.1273571 0.01036534 0.0642667 0.05604814 0.0398609 0.1379489 0.0470791 0.0496962 0.0715525 0.02370259 0.03854457 0.0911726 0.0196348 0.0176818 0.0313543 6.5772e-02 0.0245778 0.0277026 0.0402813 0.0224883 0.0432544 0.0169668 0.0214387 23 0.0857821 0.0642148 2.3766e-02 27 0.1300808 0.0999826 0.03009819 2.0089e-03 9.9963e-01 weaklyHypermeth 0.23229030 1.0000e+00 insignificant 1.2852e-04 9.9904e-01 weaklyHypermeth 0.0369511 1.000000 weaklyHypermeth 0.01313511 0.469212 insignificant 1 insignificant 0.0857411 0.0258467 0.06479392 26 0.1076614 0.0592580 0.0484034 2.2228e-15 1.0000e+00 weaklyHypermeth 4.9396e-14 1.0000e+00 weaklyHypermeth 7.4499e-18 1.0000e+00 weaklyHypermeth 5.3214e-16 1.0000e+00 weaklyHypermeth 6.0447e-02 1.7909e-04 weaklyHypermeth 4.4772e-03 weaklyHypermeth 0.0855056 0.0262270 0.05714645 26 0.1024803 0.0363034 0.0661769 6.1236e-15 1.0000e+00 weaklyHypermeth 3.0618e-12 1.0000e+00 weaklyHypermeth 8.1771e-14 1.0000e+00 weaklyHypermeth 8.1771e-11 1.0000e+00 weaklyHypermeth 7.0516e-02 2.6666e-04 weaklyHypermeth 0.0333320 weaklyHypermeth 0.0641480 0.0258467 0.03972979 26 0.0984664 0.0592580 0.0392084 2.4745e-08 1.0000e+00 weaklyHypermeth 3.1323e-07 1.0000e+00 weaklyHypermeth 1.9748e-08 1.0000e+00 weaklyHypermeth 7.3140e-07 1.0000e+00 weaklyHypermeth 0.0473122 8.7218e-03 weaklyHypermeth 1.0261e-01 insignificant 0.0634513 0.0262270 3.2297e-02 26 0.0752860 0.0363034 0.03898260 3.2780e-06 1.0000e+00 weaklyHypermeth 3.6422e-04 1.0000e+00 weaklyHypermeth 1.7899e-05 1.0000e+00 weaklyHypermeth 4.4748e-03 1.0000e+00 weaklyHypermeth 0.05738102 0.00442956 weaklyHypermeth 0.42873 insignificant 0.0256181 0.0262270 -0.00910054 26 0.0353894 0.0363034 -0.00091408 7.5954e-01 2.4446e-02 weaklyHypometh 1.0000e+00 1.3734e-01 insignificant 9.9159e-01 2.6937e-02 weaklyHypometh 1.0000000 1.9668e-01 insignificant 0.0100688 4.4279e-01 insignificant 1.00000000 insignificant chr19 17914550 17915550 53102 CCDC124 ENSG00000007080 0.5643051 737 24 0.7014508 473 22 0.7656314 534 22 0.7541649 885 23 0.8127339 308 19 0.3247967 1030 22 0.8793938 537 22 0.7463484 465 22 0.7209425 532 22 0.8352157 633 22 0.7340678 587 22 0.5005921 599 22 0.9054251 711 22 0.8961232 242 9 0.8655920 632 22 0.3221036 429 22 0.5941270 246 15 0.63583161 788 22 0.5244803 525 22 0.8345967 618 22 0.4984164 261 17 0.3577676 491 19 0.4213482 764 22 0.2909300 394 22 0.3528557 369 17 0.7014846 702 22 0.6143656 434 22 0.5144850 292 20 0.7304655 449 22 0.90668125 648 22 0.7735867 545 22 0.5812701 944 22 0.7260802 502 22 0.7461967 439 22 0.6496425 715 14 0.7754729 330 23 0.752165 320 19 0.69629874 612 28 0.5438938 688 24 0.5673041 809 24 0.8682391 540 24 0.7427837 697 22 0.5556146 798 22 0.5149648 0.6925991 0.7907304 0.7471527 0.8354592 0.3108471 0.8819577 0.78449889 0.7599307 0.84121317 0.7542890 0.4851894 0.90685165 0.8189967 0.8852522 0.33519889 0.5640450 0.6772101 0.50545331 0.8740620 0.5377496 0.40317414 0.4801081 0.25190816 0.4256285 0.6929104 0.6901289 0.6142735 0.7350148 0.89889204 0.80839705 0.6146520 0.7724150 0.7548721 0.8150662 7.5701e-01 0.8149441 0.6748551 0.6380762 0.5728668 0.8981785 0.8004807 0.5206986 18 0.6986706 0.6088479 8.3262e-02 22 0.6671506 0.5876274 0.07952325 9.0082e-05 1.0000e+00 weaklyHypermeth 0.01801644 1.0000e+00 weaklyHypermeth 1.3891e-06 1.0000e+00 weaklyHypermeth 0.0013891 1.000000 weaklyHypermeth 0.13392474 0.060427 insignificant 1 insignificant 0.6987051 0.7892392 -0.07968976 22 0.6786783 0.7275232 -0.0488449 6.6605e-01 6.0611e-05 weaklyHypometh 1.0000e+00 4.6624e-03 weaklyHypometh 7.6147e-01 1.4298e-05 weaklyHypometh 1.0000e+00 2.0425e-03 weaklyHypometh -2.8413e-02 5.1945e-01 insignificant 1.0000e+00 insignificant 0.6987051 0.6536392 0.01579483 22 0.6786783 0.6561341 0.0225441 7.9523e-02 6.6354e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.2619e-01 8.9027e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.0329e-02 6.0910e-01 insignificant 1.0000000 insignificant 0.6089795 0.7892392 -0.15780384 22 0.5936707 0.7275232 -0.1338525 9.8049e-01 7.8255e-14 weaklyHypometh 1.0000e+00 1.1179e-11 weaklyHypometh 9.9388e-01 3.3761e-10 weaklyHypometh 1.0000e+00 1.2629e-07 weaklyHypometh -0.1623379 1.4882e-02 weaklyHypometh 1.6722e-01 insignificant 0.6091039 0.6534541 -6.9738e-02 22 0.6072150 0.6342630 -0.02704802 9.7075e-01 2.2090e-04 weaklyHypometh 1.0000e+00 1.6992e-02 weaklyHypometh 9.9956e-01 3.1483e-03 weaklyHypometh 1.0000e+00 2.0989e-01 insignificant -0.09359566 0.29520634 insignificant 1.00000 insignificant 0.7892392 0.6536392 0.10864396 22 0.7275232 0.6561341 0.07138903 1.6780e-05 9.9875e-01 weaklyHypermeth 3.3560e-03 1.0000e+00 weaklyHypermeth 4.9703e-03 9.9541e-01 weaklyHypermeth 0.9940615 1.0000e+00 insignificant 0.0687423 3.5550e-01 insignificant 1.00000000 insignificant chr19 18063450 18064450 53105 IL12RB1 ENSG00000096996 0.8712821 152 6 0.7186713 182 6 0.8518519 54 6 0.8859052 252 6 0.7619048 24 0 0.9091574 227 6 0.9269841 48 6 0.7932105 78 6 0.8058081 34 2 0.8541667 36 6 0.7206960 130 6 0.9166667 12 0 0.7222222 36 2 0.9629630 26 2 0.7708333 24 2 0.8333333 24 0 1.0000000 28 4 0.89099294 152 6 0.8814815 86 6 0.6956286 108 6 0.7714286 19 1 NA 0 0 0.9230769 52 6 0.7982026 89 7 0.9375000 32 4 0.7482993 151 6 0.8474747 41 6 0.9166667 12 0 0.8931865 73 6 0.73652402 179 6 0.8756611 211 6 0.7586616 177 4 0.6040365 97 6 0.7142857 34 4 0.7446429 223 6 0.6666667 14 0 0.744048 81 6 0.63378456 144 6 0.6306843 236 6 0.8595238 201 6 0.8472370 294 6 0.7977583 49 2 0.9001148 279 6 0.8712821 0.7915617 0.8518519 0.8859052 0.8888889 0.9091574 0.9148148 0.92541221 0.8058081 0.85416667 0.8408120 0.9166667 0.86555350 0.9629630 0.7708333 0.83333333 0.9110595 0.8909929 0.88148148 0.8115668 0.9000000 NA 0.9230769 0.89760349 0.8695322 0.8730159 0.8474747 0.9166667 0.8931865 0.85927803 0.85493799 0.8851052 0.7047092 0.7142857 0.8687500 6.6667e-01 0.7440476 0.7394153 0.8409124 0.8595238 0.8472370 0.7977583 0.8834673 0 0.8809107 0.8986486 -5.4285e-04 6 0.7809375 0.7803337 0.00060372 9.5098e-01 8.9681e-01 insignificant 1.00000000 1.0000e+00 insignificant 8.9386e-01 8.0113e-01 insignificant 1.0000000 1.000000 insignificant 0.00171687 0.955165 lowCoverage 1 lowCoverage 0.8807715 0.8397976 0.07374979 6 0.7496428 0.6681867 0.0814561 3.7489e-05 9.9005e-01 weaklyHypermeth 3.1504e-04 1.0000e+00 weaklyHypermeth 5.5225e-03 9.8147e-01 weaklyHypermeth 4.5641e-02 1.0000e+00 weaklyHypermeth 1.5411e-01 3.0063e-04 lowCoverage 6.8326e-03 lowCoverage 0.8809107 0.8895184 0.01272283 6 0.7809375 0.7085594 0.0723780 3.5274e-01 7.6166e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.2827e-01 9.4861e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.1624e-02 5.5948e-01 lowCoverage 1.0000000 lowCoverage 0.8979592 0.8397976 0.06987478 6 0.7489528 0.6681867 0.0807661 1.2369e-03 9.9101e-01 weaklyHypermeth 8.8985e-03 1.0000e+00 weaklyHypermeth 6.0369e-03 9.9317e-01 weaklyHypermeth 5.0308e-02 1.0000e+00 weaklyHypermeth 0.1523938 5.3352e-04 lowCoverage 1.1351e-02 lowCoverage 0.8986486 0.8895184 1.5890e-02 6 0.7803337 0.7085594 0.07177430 3.1880e-01 7.3603e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.2785e-01 9.1028e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02990746 0.58865253 lowCoverage 1.00000 lowCoverage 0.8397976 0.8903592 -0.05135689 6 0.6681867 0.8097822 -0.14159550 8.7389e-01 2.1325e-02 weaklyHypometh 1.0000e+00 1.2186e-01 insignificant 8.6252e-01 6.8803e-02 insignificant 1.0000000 4.1643e-01 insignificant -0.1224863 5.9286e-02 lowCoverage 0.44576079 lowCoverage chr19 18132450 18133450 53106 PIK3R2 ENSG00000105647 0.2215493 1197 40 0.1498795 844 40 0.2714010 990 40 0.1655882 1616 40 0.2006595 900 40 0.2172407 1782 40 0.2614991 1050 41 0.2736325 815 40 0.1836845 1319 40 0.2661634 1591 40 0.2519666 944 40 0.1403000 1146 40 0.2292927 1258 40 0.1880095 663 40 0.2174660 1561 40 0.1940639 895 33 0.0315903 579 27 0.16102643 2209 40 0.1959526 802 40 0.2249351 1246 40 0.1959489 594 38 0.1369772 1446 40 0.2604431 907 40 0.1338604 752 36 0.1527126 2236 40 0.2152878 1255 40 0.1457840 1101 40 0.1927483 693 31 0.1865031 924 40 0.23167786 1251 40 0.1890257 1055 40 0.2833971 1563 40 0.0490036 854 40 0.0227918 1108 40 0.0904530 886 29 0.0619016 1474 40 0.060745 636 41 0.07313204 1083 40 0.1266065 1611 40 0.1780744 1301 40 0.1617773 1207 40 0.1474310 1771 40 0.1565040 1429 40 0.1520301 0.1142211 0.1348723 0.1128044 0.1570354 0.1666924 0.1520984 0.13366617 0.1281475 0.16806493 0.1597779 0.1188997 0.15867804 0.1409329 0.1496891 0.12413463 0.1340904 0.1061244 0.14545155 0.1497790 0.1672067 0.09983676 0.1667636 0.11275139 0.1310273 0.1341107 0.1152227 0.1669502 0.1418579 0.14376544 0.11489044 0.1569285 0.0266685 0.0210678 0.0700866 5.3141e-02 0.0375286 0.0627765 0.1041738 0.1159439 0.1106807 0.1067099 0.1168106 40 0.1518052 0.1568741 5.3374e-03 40 0.2393836 0.1608320 0.07855162 6.1713e-02 9.9844e-01 insignificant 1.00000000 1.0000e+00 insignificant 2.9826e-02 9.9974e-01 weaklyHypermeth 1.0000000 1.000000 insignificant 0.00859789 0.650969 insignificant 1 insignificant 0.1518246 0.0774963 0.13795374 40 0.2432791 0.0728758 0.1704033 1.2220e-53 1.0000e+00 weaklyHypermeth 2.0367e-51 1.0000e+00 weaklyHypermeth 5.2993e-29 1.0000e+00 weaklyHypermeth 5.2993e-26 1.0000e+00 weaklyHypermeth 1.4262e-01 9.2202e-09 weaklyHypermeth 7.0924e-07 weaklyHypermeth 0.1516683 0.1314387 0.03041944 40 0.2205007 0.1695895 0.0509111 5.2137e-10 2.8439e-01 weaklyHypermeth 1.0427e-07 1.0000e+00 weaklyHypermeth 1.7342e-06 8.8282e-01 weaklyHypermeth 2.4774e-04 1.0000e+00 weaklyHypermeth 4.8216e-02 4.8951e-03 weaklyHypermeth 0.2039628 insignificant 0.1569425 0.0774834 0.15046242 40 0.1664752 0.0715973 0.0948779 2.9378e-31 1.0000e+00 weaklyHypermeth 1.9585e-29 1.0000e+00 weaklyHypermeth 5.1125e-15 1.0000e+00 weaklyHypermeth 4.6477e-13 1.0000e+00 weaklyHypermeth 0.1340261 5.2530e-07 weaklyHypermeth 4.3775e-05 weaklyHypermeth 0.1574034 0.1314387 3.1109e-02 40 0.1949806 0.1695895 0.02539105 2.0651e-04 4.7181e-01 weaklyHypermeth 8.9596e-03 1.0000e+00 weaklyHypermeth 1.7519e-02 4.8199e-01 weaklyHypermeth 5.7726e-01 1.0000e+00 insignificant 0.03961851 0.02751345 weaklyHypermeth 0.80922 insignificant 0.0781486 0.1314387 -0.12187914 40 0.0549159 0.1695895 -0.11467365 1.0000e+00 2.7541e-22 weaklyHypometh 1.0000e+00 2.5037e-20 weaklyHypometh 1.0000e+00 6.0737e-14 weaklyHypometh 1.0000000 3.0368e-11 weaklyHypometh -0.0944076 3.7448e-05 weaklyHypometh 0.00267485 weaklyHypometh chr19 18192350 18193350 53108 RAB3A ENSG00000105649 0.1337243 127 8 0.1408160 273 8 0.0096774 356 8 0.1203704 93 8 0.0909091 91 8 0.0215933 213 8 0.0015674 225 8 0.2306954 236 8 0.0877193 226 8 0.1150000 214 9 0.0759033 185 9 0.0062891 275 8 0.2618798 226 5 0.1666667 36 5 0.1001871 195 9 0.0000000 320 8 0.2839727 264 4 0.14983165 73 8 0.1481481 150 4 0.0653963 226 8 0.0094261 126 8 0.1100000 88 8 0.0595578 131 4 0.1043771 175 8 0.0722222 42 3 0.0764286 267 8 0.0085597 163 8 0.0034965 119 8 0.1170034 230 4 0.15704676 236 5 0.1552957 342 10 0.1212121 286 8 0.1213626 191 8 0.1047619 79 3 0.0000000 128 8 0.0000000 23 3 0.106494 62 4 0.00848986 233 8 0.1319930 138 8 0.0222277 175 8 0.0000000 20 3 0.0000000 72 4 0.0142974 77 7 0.0331711 0.0107946 0.0052091 0.0114815 0.0000000 0.0243930 0.0039080 0.00804598 0.0072515 0.01073333 0.0153030 0.0146288 0.01912217 0.0077521 0.0184220 0.00000000 0.0299405 0.0628283 0.02222222 0.0154865 0.0171531 0.02088889 0.0308358 0.03226337 0.0493827 0.0032381 0.0134584 0.0103030 0.0051029 0.04134187 0.03415867 0.0000000 0.0712593 0.0107937 0.0000000 0.0000e+00 0.0325079 0.0149236 0.0338928 0.0346856 0.0000000 0.0000000 0.0249383 4 0.0232500 0.0303855 -3.0439e-03 8 0.1608626 0.1163251 0.04453751 5.4100e-01 7.0949e-01 insignificant 1.00000000 1.0000e+00 insignificant 7.0745e-01 9.4072e-01 insignificant 1.0000000 1.000000 insignificant 0.02763188 0.266199 insignificant 1 insignificant 0.0230346 0.0391061 -0.01577456 5 0.1702261 0.1002599 0.0699661 5.6402e-01 2.7877e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.7951e-01 9.6144e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.3666e-02 1.0635e-01 insignificant 6.8134e-01 insignificant 0.0205375 0.0352697 -0.01754980 8 0.1667101 0.1093396 0.0573704 1.3184e-01 3.1486e-04 weaklyHypometh 1.0000e+00 1.8521e-02 weaklyHypometh 4.2886e-01 4.9660e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.6814e-02 3.5457e-02 weaklyHypermeth 0.5376914 insignificant 0.0300410 0.0391061 -0.01218891 5 0.1085802 0.1002599 0.0083203 9.6291e-01 9.2328e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.1460e-01 9.9914e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0260342 3.9089e-01 insignificant 1.0000e+00 insignificant 0.0264133 0.0353430 -1.6350e-02 8 0.1190994 0.1192796 -0.00018017 8.2352e-01 1.2016e-02 weaklyHypometh 1.0000e+00 3.2111e-01 insignificant 7.0944e-01 6.2747e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.04918186 0.13685371 insignificant 1.00000 insignificant 0.0381356 0.0333333 -0.00048441 5 0.1136713 0.0312076 0.08246369 9.7934e-01 3.6046e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3797e-01 7.9043e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.0231477 5.2324e-01 insignificant 1.00000000 insignificant chr19 18276150 18277150 53111 JUND ENSG00000130522 0.3013133 266 12 0.1283535 355 12 0.1894926 410 12 0.1940912 352 9 0.1522130 214 9 0.3356478 341 11 0.1647697 277 9 0.1582624 327 9 0.1440584 394 9 0.2276476 390 9 0.2392477 290 9 0.1490868 277 9 0.0666407 405 9 0.3114171 239 5 0.1482870 465 9 0.2799097 306 9 0.1162992 162 9 0.17262639 366 8 0.0911920 352 10 0.1265903 374 11 0.2990921 152 10 0.0956425 217 9 0.3162591 339 12 0.0972231 338 10 0.1778375 144 6 0.1633743 571 12 0.1241670 240 9 0.1348993 228 9 0.1758546 291 9 0.08810256 568 12 0.1832818 508 12 0.2690496 409 12 0.0100956 350 12 0.0137566 199 9 0.0000000 281 8 0.0000000 66 7 0.037083 283 8 0.02935000 380 12 0.1202542 331 10 0.1169306 379 10 0.0402463 290 12 0.1270159 324 10 0.1823621 296 9 0.2205272 0.1625550 0.1664832 0.2059937 0.1793325 0.2629098 0.1582846 0.18736956 0.1759508 0.24903258 0.2763746 0.1289614 0.08925436 0.2537454 0.1434696 0.31235454 0.1262386 0.2043638 0.11832039 0.1099392 0.3210345 0.11647229 0.3038449 0.15212750 0.2412340 0.2090266 0.1461371 0.1054301 0.2132942 0.10962122 0.20755120 0.2951679 0.0065042 0.0303044 0.0014434 0.0000e+00 0.0144878 0.0046858 0.0803758 0.0918099 0.0462377 0.0761693 0.2118945 6 0.1768562 0.1890137 -2.5821e-03 10 0.2329883 0.1521299 0.08085843 3.6740e-01 8.9735e-01 insignificant 1.00000000 1.0000e+00 insignificant 8.7579e-01 7.9587e-01 insignificant 1.0000000 1.000000 insignificant 0.00779204 0.785450 insignificant 1 insignificant 0.1770372 0.0121873 0.17374802 10 0.2517386 0.0114591 0.2402795 3.9847e-22 1.0000e+00 weaklyHypermeth 1.2452e-20 1.0000e+00 weaklyHypermeth 4.9172e-18 1.0000e+00 weaklyHypermeth 3.7824e-16 1.0000e+00 weaklyHypermeth 1.6981e-01 2.0769e-09 weaklyHypermeth 2.0769e-07 weaklyHypermeth 0.1768562 0.0919753 0.09290842 10 0.2329883 0.1381621 0.0948262 5.9992e-09 9.9992e-01 weaklyHypermeth 9.9986e-07 1.0000e+00 weaklyHypermeth 4.5660e-08 1.0000e+00 weaklyHypermeth 1.1415e-05 1.0000e+00 weaklyHypermeth 6.7496e-02 4.0269e-02 weaklyHypermeth 0.5592859 insignificant 0.1892027 0.0121873 0.17681790 12 0.1755345 0.0114591 0.1640754 3.6404e-18 1.0000e+00 weaklyHypermeth 1.1376e-16 1.0000e+00 weaklyHypermeth 2.3252e-16 1.0000e+00 weaklyHypermeth 2.9065e-14 1.0000e+00 weaklyHypermeth 0.1620177 1.3765e-05 weaklyHypermeth 5.7353e-04 weaklyHypermeth 0.1893313 0.0914710 9.7609e-02 10 0.1570439 0.1123166 0.04472732 4.9381e-06 9.9522e-01 weaklyHypermeth 4.9381e-04 1.0000e+00 weaklyHypermeth 4.7954e-06 9.9994e-01 weaklyHypermeth 1.5985e-03 1.0000e+00 weaklyHypermeth 0.05970347 0.08827497 insignificant 1.00000 insignificant 0.0122108 0.0927573 -0.08171135 10 0.0124140 0.1234603 -0.11104625 9.9997e-01 3.5503e-11 weaklyHypometh 1.0000e+00 1.1095e-09 weaklyHypometh 9.9998e-01 1.0866e-06 weaklyHypometh 1.0000000 4.5275e-05 weaklyHypometh -0.1023142 8.8424e-03 weaklyHypometh 0.13804252 insignificant chr19 18288450 18289450 53112 JUND ENSG00000130522 0.6784549 234 6 0.8002075 95 6 0.5637663 93 6 0.7467523 134 6 0.7543210 67 6 0.7720363 182 6 0.7747608 90 5 0.7930943 106 5 0.8182927 82 6 0.6940136 68 5 0.6488573 231 6 0.8756313 52 4 0.6731756 80 5 0.8611111 18 1 0.7904040 72 5 0.7190476 31 4 0.6636905 39 4 0.82810245 91 6 0.8172441 122 6 0.8539562 139 6 0.8157407 59 5 0.8916667 42 5 0.6745410 125 6 0.5962185 56 5 0.8492063 46 5 0.7340911 144 6 0.7798972 59 3 0.5839286 59 3 0.8744589 85 6 0.80114884 141 6 0.7917650 152 6 0.7381679 207 6 0.5725078 68 5 0.6766463 90 6 0.7725469 106 6 0.7506764 48 4 0.687302 79 5 0.68701787 150 6 0.7306776 148 6 0.8904877 181 6 0.7989481 170 6 0.8371471 174 6 0.8239378 148 6 0.8679463 0.8542288 0.7986196 0.8157580 0.7387153 0.8414193 0.7656234 0.78879520 0.8253620 0.78783234 0.8081408 0.8686869 0.88668211 0.8524506 0.8526278 0.85193452 0.7771577 0.8676328 0.88374534 0.8793797 0.8964844 0.91666667 0.7633227 0.72896242 0.8837426 0.8438988 0.8610205 0.8060455 0.8710092 0.81914040 0.83601275 0.8276535 0.7753642 0.7126858 0.8068689 6.9937e-01 0.7454861 0.7579172 0.8980349 0.8891472 0.8548961 0.8875703 0.8744516 3 0.8104640 0.8263830 -4.5380e-03 6 0.7531943 0.7097542 0.04344006 9.3088e-01 3.6564e-01 insignificant 1.00000000 1.0000e+00 insignificant 9.6406e-01 5.6985e-01 insignificant 1.0000000 1.000000 insignificant -0.00455656 0.895675 insignificant 1 insignificant 0.8109181 0.7504621 0.06697072 6 0.7307537 0.6076618 0.1230919 5.6679e-04 9.9523e-01 weaklyHypermeth 3.8821e-03 1.0000e+00 weaklyHypermeth 3.2126e-03 9.9489e-01 weaklyHypermeth 2.8181e-02 1.0000e+00 weaklyHypermeth 6.5230e-02 8.5058e-02 insignificant 5.7359e-01 insignificant 0.8103704 0.8416565 -0.04394804 6 0.7257714 0.7743261 -0.0485547 9.7996e-01 3.5777e-02 weaklyHypometh 1.0000e+00 5.1851e-01 insignificant 9.9499e-01 5.0728e-02 insignificant 1.0000e+00 7.2469e-01 insignificant -5.9894e-02 9.5223e-02 insignificant 0.9461992 insignificant 0.8270224 0.7504621 0.07116151 6 0.7758393 0.6076618 0.1681775 3.7810e-04 9.9974e-01 weaklyHypermeth 2.9780e-03 1.0000e+00 weaklyHypermeth 1.0913e-03 9.9930e-01 weaklyHypermeth 1.1132e-02 1.0000e+00 weaklyHypermeth 0.0697864 1.0858e-01 insignificant 6.4630e-01 insignificant 0.8270869 0.8416565 -3.6877e-02 6 0.7886158 0.7743261 0.01428968 9.0588e-01 9.4626e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7190e-01 1.6707e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.05533711 0.17978670 insignificant 1.00000 insignificant 0.7504621 0.8412698 -0.10901886 6 0.6076618 0.7098478 -0.10218606 9.9994e-01 1.6309e-04 weaklyHypometh 1.0000e+00 1.6473e-03 weaklyHypometh 1.0000e+00 2.9877e-04 weaklyHypometh 1.0000000 5.2306e-03 weaklyHypometh -0.1251235 1.0276e-02 weaklyHypometh 0.15054770 insignificant chr19 18457950 18458950 53123 ISYNA1 ENSG00000105655 0.7732323 142 6 0.4988605 87 5 0.4618867 171 6 0.8815453 183 6 0.8357527 139 6 0.9059783 153 6 0.8040247 200 6 0.6784525 224 6 0.8194074 142 6 0.7603637 159 4 0.7586410 225 6 0.5781609 131 6 0.5089011 158 6 0.7331933 145 4 0.6263403 250 6 0.3297683 90 6 0.8750000 5 0 0.52133430 206 6 0.6803989 234 6 0.9045256 154 6 0.6147131 51 3 0.5208333 95 6 0.6271795 105 4 0.6734694 79 4 0.7677632 68 5 0.8076446 204 6 0.6773379 180 6 0.5854167 53 4 0.7409439 289 6 0.77646486 165 6 0.8338068 151 6 0.8051964 233 6 0.0143849 229 6 0.0086025 357 6 0.0521739 182 4 0.0000000 24 4 0.092334 266 7 0.00701058 411 6 0.5981129 181 6 0.5691845 143 6 0.5907937 120 6 0.7885379 93 6 0.7857143 64 4 0.8196118 0.6086157 0.6061621 0.8956112 0.8655310 0.9308566 0.8710532 0.75535852 0.8575442 0.89940517 0.8351733 0.7255801 0.64283456 0.8609275 0.7729056 0.42963007 0.8289122 0.5243060 0.71152532 0.9546679 0.6846442 0.53844153 0.8471910 0.76016586 0.7800578 0.8298210 0.7402521 0.7381398 0.7780101 0.79599461 0.83741275 0.8379746 0.0098705 0.0136281 0.0688317 8.1344e-04 0.0064858 0.0110814 0.6717505 0.6108282 0.6144819 0.7772816 0.8072499 4 0.7579737 0.7973700 -3.2100e-02 6 0.6079678 0.7116569 -0.10368917 9.9710e-01 5.1645e-02 insignificant 1.00000000 1.0000e+00 insignificant 9.4711e-01 2.6343e-01 insignificant 1.0000000 1.000000 insignificant -0.00577573 0.903607 insignificant 1 insignificant 0.7582108 0.0190606 0.73967794 6 0.6839637 0.0886954 0.5952683 1.2228e-48 9.9978e-01 hypermethylated 1.3587e-46 1.0000e+00 hypermethylated 1.4672e-14 1.0000e+00 hypermethylated 7.7224e-13 1.0000e+00 hypermethylated 6.6770e-01 2.0523e-14 hypermethylated 9.2516e-12 hypermethylated 0.7582108 0.6472546 0.09986291 6 0.6839637 0.7113086 -0.0273448 7.5772e-03 7.8825e-01 weaklyHypermeth 1.8041e-01 1.0000e+00 insignificant 9.1034e-02 8.4823e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.0320e-02 6.3608e-01 insignificant 1.0000000 insignificant 0.7978469 0.0190606 0.77704358 6 0.8006140 0.0886954 0.7119187 1.1500e-46 1.0000e+00 hypermethylated 2.3000e-44 1.0000e+00 hypermethylated 5.1945e-11 1.0000e+00 hypermethylated 2.5973e-09 1.0000e+00 hypermethylated 0.6734797 1.5947e-12 hypermethylated 1.5947e-09 hypermethylated 0.7978469 0.6472546 1.3612e-01 6 0.8006140 0.7113086 0.08930548 3.9103e-04 9.9689e-01 weaklyHypermeth 1.5039e-02 1.0000e+00 weaklyHypermeth 7.3622e-02 9.8765e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03609550 0.54958892 insignificant 1.00000 insignificant 0.0190606 0.6472546 -0.62740412 6 0.0886954 0.7113086 -0.62261317 1.0000e+00 5.1955e-27 hypomethylated 1.0000e+00 7.4222e-25 hypomethylated 1.0000e+00 2.8882e-09 hypomethylated 1.0000000 2.4068e-07 hypomethylated -0.6373842 9.1257e-05 hypomethylated 0.00506983 hypomethylated chr19 18629450 18630450 53127 KLHL26 ENSG00000167487 0.6725427 118 6 0.5588606 103 5 0.5502914 74 5 0.7377551 54 3 0.6244444 31 2 0.7085134 100 6 0.5666667 18 2 0.6128205 72 5 0.5568581 66 5 0.6033613 50 5 0.8180245 130 5 0.4277778 33 2 0.4215238 135 5 NA 0 0 0.4879699 52 5 0.3166667 16 0 0.6864469 40 5 0.41809117 55 6 0.6612645 118 6 0.5937020 94 5 0.6892857 32 4 0.1166667 51 5 0.4429087 92 5 0.8666667 31 5 0.8933333 14 2 0.5523949 108 7 0.5011905 57 5 0.4000000 9 0 0.5948052 31 2 0.56699227 94 5 0.5544591 127 5 0.9033646 117 6 0.7256061 74 5 0.7124174 115 5 1.0000000 40 1 0.3726984 56 3 0.667778 49 5 0.52544239 129 7 0.1289683 97 6 0.2522946 123 6 0.3674603 53 6 0.3106303 87 6 0.1709325 62 6 0.6925847 0.5108060 0.5228136 0.6626984 0.4946502 0.7828799 0.5185185 0.57486546 0.5594640 0.59528997 0.7908667 0.3971193 0.38101117 NA 0.4600854 0.30246914 0.5639669 0.4096233 0.58246014 0.5598035 0.7094356 0.10596708 0.6744619 0.79012346 0.8246914 0.4591798 0.5315991 0.3148148 0.5600449 0.55724385 0.48727529 0.8842822 0.6540778 0.6350500 0.8535549 2.1399e-01 0.6879287 0.3175977 0.1604252 0.1657685 0.2821869 0.1974319 0.1861772 1 0.5938190 0.6036745 -1.0167e-02 5 0.5549090 0.5279963 0.02691269 8.1377e-01 7.4064e-01 insignificant 1.00000000 1.0000e+00 insignificant 9.7102e-01 5.8675e-01 insignificant 1.0000000 1.000000 insignificant -0.00998380 0.891078 lowCoverage 1 lowCoverage 0.5942563 0.6069114 0.02481023 5 0.6341817 0.6728918 -0.0387101 5.1896e-01 3.3488e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3861e-01 4.3549e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -8.7135e-02 3.7386e-01 lowCoverage 1.0000e+00 lowCoverage 0.5942563 0.2203791 0.37541420 5 0.6341817 0.2201465 0.4140352 7.1608e-17 1.0000e+00 hypermethylated 7.1608e-14 1.0000e+00 hypermethylated 9.5735e-11 1.0000e+00 hypermethylated 4.4310e-08 1.0000e+00 hypermethylated 3.3413e-01 2.2848e-04 lowCoverage 0.0333320 lowCoverage 0.6052632 0.6069114 0.02986500 5 0.6034243 0.6728918 -0.0694674 5.2445e-01 3.5384e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.4387e-01 5.8378e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0771514 4.9165e-01 lowCoverage 1.0000e+00 lowCoverage 0.6052632 0.2203791 3.8578e-01 5 0.6034243 0.2201465 0.38327781 2.1040e-11 1.0000e+00 hypermethylated 1.0520e-08 1.0000e+00 hypermethylated 3.3671e-07 1.0000e+00 hypermethylated 1.6836e-04 1.0000e+00 hypermethylated 0.34411509 0.00057076 lowCoverage 0.11415 lowCoverage 0.6069114 0.2203791 0.35692692 6 0.6728918 0.2201465 0.45274523 1.6301e-06 1.0000e+00 hypermethylated 5.4336e-04 1.0000e+00 hypermethylated 1.6160e-04 1.0000e+00 hypermethylated 0.0538657 1.0000e+00 hypermethylated 0.4212665 3.0102e-03 lowCoverage 0.06544005 lowCoverage chr19 18631750 18632750 53128 KLHL26 ENSG00000167487 0.8856542 609 18 0.8489348 293 19 0.6121903 391 21 0.8712738 669 21 0.7734615 110 8 0.8502464 522 18 0.7867424 109 10 0.7821148 293 19 0.8110975 267 17 0.8888126 340 20 0.8943491 568 20 0.6388243 84 6 0.5599098 534 20 0.8455882 87 6 0.6699664 288 16 0.6333333 64 4 0.6591667 65 3 0.51924938 705 19 0.7655355 331 20 0.7640707 451 18 0.8974536 182 14 0.6151254 286 15 0.8619486 314 19 0.8156890 187 16 0.7898789 293 16 0.8451879 425 21 0.7152506 251 17 0.6646197 86 7 0.7613318 311 17 0.73052703 433 20 0.6867551 430 21 0.9207824 581 18 0.2648378 402 21 0.2268146 381 20 0.2290816 449 14 0.5479597 180 13 0.527598 178 14 0.14272164 581 20 0.7604417 511 17 0.7764394 727 21 0.8842787 589 16 0.8039978 510 17 0.8419949 677 16 0.8528292 0.8743973 0.6295833 0.9211129 0.8716156 0.8960605 0.8255404 0.80249816 0.8867043 0.90757280 0.9145147 0.6356912 0.60917496 0.8225277 0.7766074 0.74373069 0.6721445 0.5765157 0.83157368 0.8341310 0.9240339 0.65880624 0.8858696 0.86121411 0.8263389 0.8627536 0.8293986 0.7121161 0.8105872 0.77495776 0.69671051 0.9274282 0.2830744 0.2218477 0.3749010 6.5940e-01 0.5509971 0.2357301 0.7652396 0.8237649 0.9102694 0.8222559 0.8408121 5 0.7921829 0.8093344 -1.5471e-02 18 0.7285338 0.7800611 -0.05152731 9.6041e-01 1.2513e-01 insignificant 1.00000000 1.0000e+00 insignificant 9.3687e-01 1.4629e-01 insignificant 1.0000000 1.000000 insignificant -0.02235308 0.562230 insignificant 1 insignificant 0.7921829 0.2483871 0.52893159 18 0.7285338 0.2453530 0.4831809 7.1145e-76 1.0000e+00 hypermethylated 3.5573e-73 1.0000e+00 hypermethylated 7.5628e-26 1.0000e+00 hypermethylated 2.5209e-23 1.0000e+00 hypermethylated 4.2986e-01 9.1903e-04 hypermethylated 1.6710e-02 hypermethylated 0.7922997 0.8244857 -0.02285586 16 0.7632259 0.8030221 -0.0397962 9.8596e-01 5.7290e-02 insignificant 1.0000e+00 6.9024e-01 insignificant 9.5639e-01 8.4319e-02 insignificant 1.0000e+00 9.4696e-01 insignificant -6.0404e-02 9.8422e-02 insignificant 0.9619634 insignificant 0.8086795 0.2482727 0.54351045 18 0.7678846 0.2346855 0.5331991 1.1357e-68 1.0000e+00 hypermethylated 5.6784e-66 1.0000e+00 hypermethylated 5.3357e-26 1.0000e+00 hypermethylated 5.3357e-23 1.0000e+00 hypermethylated 0.4522102 6.5636e-04 hypermethylated 1.2870e-02 hypermethylated 0.8094480 0.8244857 -3.0043e-03 16 0.7854609 0.8030221 -0.01756124 8.5873e-01 2.3872e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.1449e-01 3.4528e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03805131 0.30516752 insignificant 1.00000 insignificant 0.2485016 0.8244857 -0.55421862 16 0.2570365 0.8030221 -0.54598566 1.0000e+00 1.1818e-43 hypomethylated 1.0000e+00 1.1818e-40 hypomethylated 1.0000e+00 3.1389e-19 hypomethylated 1.0000000 3.1389e-16 hypomethylated -0.4902615 5.4211e-04 hypomethylated 0.02258772 hypomethylated chr19 18666850 18667850 53130 CRTC1 ENSG00000105662 0.7730555 333 14 0.6037832 217 16 0.7012810 197 16 0.7912855 403 14 0.7636741 164 12 0.7302342 341 18 0.6198846 195 12 0.6987602 246 14 0.7813102 167 10 0.7304835 189 14 0.7596845 447 18 0.6871248 122 8 0.7509413 322 16 0.6665536 153 10 0.7251721 198 16 0.5619458 93 5 0.7591418 260 12 0.81278230 527 15 0.8078037 249 16 0.8630902 256 12 0.6994513 136 9 0.8702244 147 8 0.7333310 284 16 0.7716931 112 12 0.8464647 335 11 0.6670728 381 16 0.8233445 155 13 0.6281046 119 8 0.7750882 286 16 0.74005880 336 16 0.8402988 311 16 0.7868357 350 16 0.7598573 286 16 0.7252044 252 14 0.7943331 265 14 0.7476190 46 2 0.717026 267 12 0.80556993 328 16 0.7472017 274 12 0.8274590 327 18 0.7522669 357 14 0.7968402 313 12 0.8008834 318 18 0.8608753 0.7714843 0.7928873 0.8442846 0.8037648 0.8321915 0.7763311 0.84435415 0.8355895 0.86242895 0.8434932 0.7729659 0.85187000 0.7922123 0.8090878 0.59573798 0.6769512 0.8960850 0.83429514 0.8947889 0.7672038 0.91991189 0.7979443 0.82580026 0.8452343 0.8241211 0.8506400 0.7667747 0.8110825 0.81863546 0.87440797 0.8724766 0.7157007 0.8672639 0.9163832 8.1109e-01 0.7856662 0.8693425 0.8102081 0.8676422 0.8232908 0.8601079 0.8558964 2 0.8142012 0.8178426 -2.5540e-03 17 0.7353939 0.7188734 0.01652044 4.1956e-01 6.9494e-01 insignificant 1.00000000 1.0000e+00 insignificant 4.7817e-01 2.4009e-01 insignificant 1.0000000 1.000000 insignificant -0.03576439 0.203296 insignificant 1 insignificant 0.8150712 0.8095568 -0.00942212 17 0.7544530 0.7508328 0.0036202 4.1277e-02 1.5843e-01 inconclusive 2.0434e-01 1.0000e+00 insignificant 2.5052e-01 6.8087e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -2.8869e-02 2.1023e-01 insignificant 1.0000e+00 insignificant 0.8156071 0.8432977 -0.02242358 18 0.7642070 0.7930958 -0.0288888 9.4297e-01 9.2782e-02 insignificant 1.0000e+00 8.3588e-01 insignificant 9.7415e-01 4.7952e-02 weaklyHypometh 1.0000e+00 6.9495e-01 insignificant -5.5531e-02 2.7299e-02 weaklyHypometh 0.4706748 insignificant 0.8180891 0.8095568 -0.01050771 17 0.7142045 0.7508328 -0.0366283 4.8215e-01 2.1503e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.2001e-01 3.7833e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0068957 7.9512e-01 insignificant 1.0000e+00 insignificant 0.8188628 0.8432977 -1.4433e-02 17 0.7657827 0.7930958 -0.02731305 9.1042e-01 1.0971e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.1507e-01 1.7729e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01976622 0.46740913 insignificant 1.00000 insignificant 0.8099861 0.8432977 -0.01362378 17 0.7787031 0.7930958 -0.01439268 4.5425e-01 2.4007e-02 weaklyHypometh 1.0000e+00 1.3640e-01 insignificant 4.6952e-01 3.0319e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.0266620 2.4105e-01 insignificant 1.00000000 insignificant chr19 18735350 18736350 53132 CRTC1 ENSG00000105662 0.8834076 443 7 0.9410529 239 10 0.7976898 277 10 0.9404678 750 11 0.8141689 147 10 0.9101905 520 9 0.9751550 239 7 0.7360273 205 10 0.7097413 288 7 0.9165752 299 7 0.8873106 311 9 0.8686186 158 7 0.9429354 270 7 0.8582962 224 7 0.9327479 291 7 0.9002717 185 7 0.6603175 53 6 0.87816417 593 7 0.8408946 193 7 0.8609822 341 7 0.7580357 111 7 0.8192289 229 7 0.9182350 243 7 0.8077844 222 7 0.9138775 219 10 0.9582874 307 10 0.7839530 175 7 0.7745584 152 7 0.9235004 248 7 0.85368094 359 10 0.8713249 262 10 0.8481340 464 10 0.1562338 263 10 0.3239729 248 10 0.0000000 141 6 0.1293747 146 10 0.209116 234 8 0.15442913 404 10 0.9113604 479 7 0.9415569 487 10 0.9422299 415 10 0.7512393 455 7 0.9290947 368 10 0.9444967 0.9150746 0.7443947 0.9295513 0.8681928 0.9175196 0.9593798 0.90829479 0.9123101 0.91647678 0.8853659 0.9056957 0.91872019 0.9097971 0.9037524 0.83943973 0.9666483 0.8343288 0.95394503 0.9507781 0.9464088 0.86417774 0.9096774 0.92647968 0.9031822 0.9461325 0.8931739 0.9147882 0.8821691 0.92635903 0.95463272 0.9422449 0.0296179 0.2664609 0.0447891 4.9390e-02 0.2430424 0.1116600 0.8472504 0.9082457 0.8966891 0.8120262 0.8909044 7 0.9009473 0.9157472 -1.8113e-02 7 0.7468746 0.7547605 -0.00788592 8.1089e-01 7.1787e-02 insignificant 1.00000000 1.0000e+00 insignificant 4.6595e-01 6.9286e-01 insignificant 1.0000000 1.000000 insignificant 0.01020070 0.703988 insignificant 1 insignificant 0.9010788 0.1538997 0.76298625 7 0.7626950 0.1218141 0.6408808 3.0732e-108 1.0000e+00 hypermethylated 3.0732e-105 1.0000e+00 hypermethylated 7.0861e-25 1.0000e+00 hypermethylated 1.7715e-22 1.0000e+00 hypermethylated 7.0056e-01 1.5266e-06 hypermethylated 6.1065e-05 hypermethylated 0.9012325 0.8852087 0.02420073 7 0.7442570 0.8969638 -0.1527068 6.3646e-01 8.4631e-02 insignificant 1.0000e+00 7.9841e-01 insignificant 5.0815e-01 4.3411e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -3.2346e-02 4.5764e-01 insignificant 1.0000000 insignificant 0.9157472 0.1540070 0.77259604 10 0.7547605 0.1299351 0.6248255 2.9627e-86 1.0000e+00 hypermethylated 2.9627e-83 1.0000e+00 hypermethylated 1.0343e-20 1.0000e+00 hypermethylated 5.1717e-18 1.0000e+00 hypermethylated 0.6903624 1.6513e-06 hypermethylated 9.7134e-05 hypermethylated 0.9190188 0.8852087 4.2871e-02 7 0.8184300 0.8969638 -0.07853379 4.4101e-02 2.8300e-01 weaklyHypermeth 7.5995e-01 1.0000e+00 insignificant 2.8988e-01 4.3188e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04254620 0.33806738 insignificant 1.00000 insignificant 0.1539538 0.8852087 -0.73917024 7 0.1345405 0.8969638 -0.76242332 1.0000e+00 2.8886e-41 hypomethylated 1.0000e+00 1.4443e-38 hypomethylated 1.0000e+00 1.5051e-13 hypomethylated 1.0000000 5.0170e-11 hypomethylated -0.7329086 4.0533e-07 hypomethylated 0.00020266 hypomethylated chr19 18747550 18748550 53133 CRTC1 ENSG00000105662 0.9158107 859 20 0.7691053 366 20 0.8812804 354 20 0.9238947 837 20 0.8761283 239 16 0.8430441 862 20 0.8534552 261 18 0.8987629 330 19 0.8278434 378 20 0.8028180 307 20 0.8628995 625 20 0.8127045 136 15 0.7564334 430 20 0.8624931 193 15 0.8648599 287 20 0.7841703 91 9 0.9642857 27 1 0.82758014 1192 20 0.8200926 358 20 0.8923883 742 20 0.8978887 268 20 0.8970765 344 18 0.8464296 545 20 0.9678120 140 12 0.8913077 568 18 0.7455693 482 20 0.8157352 295 17 0.8841390 149 13 0.8905707 457 20 0.88843307 477 20 0.8550765 491 20 0.9289511 936 20 0.5975579 494 20 0.6265492 436 20 0.7089995 757 18 0.7486955 362 14 0.638039 302 20 0.54156141 661 20 0.8423562 514 20 0.8930647 852 20 0.9559212 558 19 0.9064635 718 20 0.8550312 648 20 0.9093279 0.7937674 0.8552481 0.9025209 0.8518553 0.8910128 0.8338897 0.87690682 0.8007718 0.91635105 0.8985832 0.7820193 0.81499474 0.8742881 0.8957473 0.82975010 0.9051019 0.8726391 0.89746268 0.8616709 0.8997154 0.86722200 0.8939059 0.92654163 0.8669208 0.8440135 0.8238114 0.8726102 0.8852989 0.84382589 0.91218950 0.9298823 0.5634513 0.6115091 0.7154436 6.9155e-01 0.6968154 0.5274385 0.9303212 0.9362164 0.9408079 0.8713518 0.8689138 10 0.8792151 0.8946040 -1.3804e-02 20 0.8110038 0.8363025 -0.02529878 9.9339e-01 2.0221e-02 weaklyHypometh 1.00000000 7.5861e-01 insignificant 9.9989e-01 1.5985e-02 weaklyHypometh 1.0000000 0.978635 insignificant -0.02374661 0.251260 insignificant 1 insignificant 0.8796568 0.5951511 0.26502989 20 0.8410038 0.5772188 0.2637850 4.4226e-49 9.9865e-01 hypermethylated 5.5283e-47 1.0000e+00 hypermethylated 1.0147e-10 9.9670e-01 hypermethylated 3.7583e-09 1.0000e+00 hypermethylated 2.0844e-01 4.9610e-04 hypermethylated 1.0125e-02 hypermethylated 0.8795439 0.9240122 -0.04115149 20 0.8010038 0.8343876 -0.0333838 1.0000e+00 1.7814e-04 weaklyHypometh 1.0000e+00 1.2724e-02 weaklyHypometh 1.0000e+00 1.5056e-03 weaklyHypometh 1.0000e+00 8.3646e-02 weaklyHypometh -3.8565e-02 1.4296e-01 insignificant 1.0000000 insignificant 0.8953307 0.5955467 0.26784760 20 0.8611984 0.6274117 0.2337867 2.2101e-32 9.9987e-01 hypermethylated 1.7001e-30 1.0000e+00 hypermethylated 3.0494e-12 1.0000e+00 hypermethylated 1.7938e-10 1.0000e+00 hypermethylated 0.2321820 1.6105e-04 hypermethylated 4.3527e-03 hypermethylated 0.8954846 0.9245513 -2.6399e-02 20 0.8776165 0.9027132 -0.02509664 9.8949e-01 5.5138e-03 weaklyHypometh 1.0000e+00 1.7230e-01 insignificant 9.4075e-01 1.2702e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01481823 0.58020062 insignificant 1.00000 insignificant 0.5950798 0.9242931 -0.33320388 20 0.5734918 0.8691537 -0.29566197 1.0000e+00 5.3716e-18 hypomethylated 1.0000e+00 3.3573e-16 hypomethylated 1.0000e+00 4.3752e-08 hypomethylated 1.0000000 2.5737e-06 hypomethylated -0.2470002 1.2334e-04 hypomethylated 0.00649146 hypomethylated chr19 18775750 18776750 53134 COMP ENSG00000105664 0.8919097 340 11 0.7638749 494 11 0.8529768 499 11 0.8956931 419 11 0.8359222 466 11 0.8994763 507 11 0.7148790 503 11 0.8882190 491 11 0.8831101 324 9 0.7195718 366 11 0.7475607 667 11 0.7491676 226 9 0.8501724 328 9 0.8979330 334 9 0.8798536 559 11 0.6917355 160 9 0.0000000 4 0 0.90817708 480 9 0.8349637 1048 9 0.8491550 399 9 0.7561888 233 11 0.8597964 211 11 0.8484160 364 11 0.8542296 327 9 0.8415916 313 11 0.8593395 658 11 0.8570466 402 11 0.8038796 194 11 0.8039697 768 11 0.92306198 690 11 0.8530093 732 11 0.9228703 441 11 0.7429648 467 11 0.7021638 431 11 0.8630752 453 7 0.8273041 146 6 0.755829 368 11 0.82733695 675 11 0.8991790 422 11 0.9327369 419 11 0.6673908 366 10 0.8937447 379 9 0.7910635 305 11 0.8976976 0.7681936 0.8376488 0.8879926 0.8722207 0.8708533 0.8380238 0.89584554 0.8619034 0.90580411 0.8810127 0.8413479 0.89803620 0.9131308 0.8533181 0.85944231 NA 0.8926395 0.89387483 0.8840112 0.8855143 0.83954386 0.8902991 0.92278312 0.8502993 0.9145406 0.8653820 0.9043117 0.8698786 0.92285390 0.92405837 0.9143961 0.7925634 0.7474558 0.8607088 8.6148e-01 0.8815204 0.8872971 0.9368495 0.9159544 0.8548093 0.8744216 0.9184859 9 0.8730546 0.9000000 -2.5832e-02 11 0.8014436 0.7416769 0.05976668 9.2779e-01 1.6616e-02 weaklyHypometh 1.00000000 7.2243e-01 insignificant 9.2897e-01 1.5772e-01 insignificant 1.0000000 1.000000 insignificant -0.06089904 0.202724 insignificant 1 insignificant 0.8730823 0.8334646 0.03694141 11 0.8083028 0.6564892 0.1518136 1.2511e-04 8.8575e-01 weaklyHypermeth 9.7744e-04 1.0000e+00 weaklyHypermeth 4.3027e-01 7.7078e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.2719e-03 9.8034e-01 insignificant 1.0000e+00 insignificant 0.8730546 0.8926494 -0.01646394 10 0.7916361 0.7171380 0.0744982 5.5643e-01 1.5207e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.4021e-01 1.2752e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -4.9105e-02 4.7007e-01 insignificant 1.0000000 insignificant 0.9005826 0.8334646 0.06628197 11 0.7405672 0.6564892 0.0840780 1.7830e-04 1.0000e+00 weaklyHypermeth 1.4615e-03 1.0000e+00 weaklyHypermeth 2.9998e-01 9.9697e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0621710 6.1875e-02 insignificant 4.1527e-01 insignificant 0.9004134 0.8931217 7.0874e-03 10 0.7398934 0.7683621 -0.02846867 5.3760e-01 7.9705e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4661e-01 6.4705e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01179364 0.82491032 insignificant 1.00000 insignificant 0.8341214 0.8930651 -0.05945410 10 0.7574875 0.7505438 0.00694370 9.9979e-01 3.9574e-02 weaklyHypometh 1.0000e+00 2.1050e-01 insignificant 9.9297e-01 4.7293e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.0503773 3.9221e-01 insignificant 1.00000000 insignificant chr19 19076850 19077850 53139 SLC25A42 ENSG00000181035 0.2532002 157 9 0.2760488 340 9 0.2100529 256 9 0.2849537 161 9 0.2500000 116 9 0.2993435 435 9 0.2648851 200 9 0.2662683 238 9 0.2084127 346 9 0.2059665 332 9 0.2941880 180 9 0.2466463 231 6 0.3182550 263 9 0.3013524 185 9 0.2846120 340 9 0.2873176 143 6 0.0109890 166 6 0.36814370 222 9 0.2961691 118 9 0.2591354 312 9 0.3198135 107 9 0.3932478 245 6 0.2864301 148 9 0.3718619 115 9 0.3318017 135 7 0.3107343 280 9 0.1731637 189 9 0.2736877 159 9 0.2380952 200 9 0.31589597 386 9 0.2948718 360 9 0.2480429 313 9 0.4808233 313 9 0.5820171 117 9 1.0000000 250 7 0.1699074 61 6 0.568154 109 9 0.44399009 294 9 0.3350000 253 9 0.4397081 220 9 0.3140212 101 9 0.3487819 119 6 0.4385221 257 9 0.0745008 0.1096025 0.0533283 0.0818281 0.0811518 0.0905498 0.0917617 0.08766151 0.0727998 0.08074385 0.0767620 0.1179208 0.15806007 0.0867722 0.0950376 0.07893067 0.0683699 0.1930484 0.12575154 0.0760146 0.1191533 0.15863082 0.0854488 0.18101565 0.0977772 0.1052476 0.0601104 0.0998326 0.0560957 0.11266457 0.07916797 0.0815381 0.3342447 0.4151931 0.7175601 2.2165e-01 0.4879107 0.2805315 0.1756516 0.2596688 0.1304911 0.1601198 0.2628207 6 0.1630458 0.2586272 -1.1850e-02 9 0.2514451 0.2671999 -0.01575476 9.7200e-01 3.1539e-01 insignificant 1.00000000 1.0000e+00 insignificant 9.7028e-01 2.1332e-01 insignificant 1.0000000 1.000000 insignificant -0.03717354 0.122103 insignificant 1 insignificant 0.1632179 0.6075175 -0.24777345 9 0.2793835 0.5320675 -0.2526840 1.0000e+00 9.1002e-28 hypomethylated 1.0000e+00 4.5501e-25 hypomethylated 1.0000e+00 2.1845e-13 hypomethylated 1.0000e+00 2.1845e-10 hypomethylated -2.8152e-01 5.0612e-02 insignificant 3.8933e-01 insignificant 0.1632179 0.2884211 -0.10537407 9 0.2793835 0.3849335 -0.1055500 9.9949e-01 5.9683e-13 weaklyHypometh 1.0000e+00 5.9683e-10 weaklyHypometh 9.9716e-01 2.4181e-07 weaklyHypometh 1.0000e+00 1.2090e-04 weaklyHypometh -1.1591e-01 7.0809e-03 weaklyHypometh 0.2442282 insignificant 0.2589218 0.6075175 -0.21574901 9 0.2968888 0.5320675 -0.2351788 1.0000e+00 4.3591e-17 hypomethylated 1.0000e+00 8.7181e-15 hypomethylated 1.0000e+00 1.7364e-10 hypomethylated 1.0000e+00 1.2629e-07 hypomethylated -0.2443448 7.7341e-02 insignificant 4.9066e-01 insignificant 0.2589218 0.2884211 -9.3486e-02 9 0.2968888 0.3849335 -0.08804473 9.8893e-01 8.5998e-08 weaklyHypometh 1.0000e+00 1.4333e-05 weaklyHypometh 9.6479e-01 5.5199e-05 weaklyHypometh 1.0000e+00 1.0382e-02 weaklyHypometh -0.07873611 0.03976977 weaklyHypometh 0.88182 insignificant 0.6075175 0.2884211 0.14784336 9 0.5320675 0.3849335 0.14713403 1.6367e-04 9.9855e-01 weaklyHypermeth 1.8185e-02 1.0000e+00 weaklyHypermeth 3.5327e-04 9.9345e-01 weaklyHypermeth 0.0883169 1.0000e+00 weaklyHypermeth 0.1656086 1.9779e-01 insignificant 0.98403448 insignificant chr19 19349650 19350650 53141 KIAA0892 ENSG00000129933 0.6744438 430 11 0.7962868 246 13 0.6718367 191 10 0.8185459 291 11 0.6426523 308 10 0.8173630 499 10 0.6055512 248 11 0.7115443 267 11 0.7583604 185 8 0.7735452 194 10 0.7638334 414 11 0.8195616 120 9 0.7515129 326 13 0.6724271 215 10 0.7976264 311 11 0.7222222 78 7 0.8606120 368 5 0.82425668 485 14 0.7918860 308 11 0.8413959 389 10 0.7154048 120 4 0.8517969 129 9 0.7714771 275 11 0.7773644 156 9 0.8479114 146 10 0.7961760 307 11 0.7254122 143 8 0.8475082 128 6 0.6289510 315 11 0.69339020 352 8 0.7942114 296 11 0.6977639 439 11 0.5990138 339 11 0.8381018 199 11 0.6457222 333 11 0.8636364 28 1 0.677049 275 9 0.73174528 308 8 0.7829341 286 11 0.8356403 277 11 0.8302554 291 11 0.7478174 245 10 0.8324762 296 11 0.8563554 0.8742585 0.8058981 0.9182532 0.8367136 0.8879049 0.7713457 0.85913414 0.8811916 0.79539748 0.8506806 0.9039626 0.88400779 0.8888891 0.8697875 0.77888446 0.9003654 0.8841398 0.90644568 0.9313643 0.8336770 0.88931214 0.8913426 0.90183288 0.9231736 0.8524880 0.8029641 0.8933462 0.8373818 0.86473732 0.90379053 0.9101202 0.7594293 0.8614542 0.8550045 9.5817e-01 0.8241469 0.9083545 0.8980815 0.9078565 0.9008599 0.9169108 0.8882772 3 0.8312596 0.8517463 -1.3035e-02 10 0.7506275 0.6699690 0.08065848 3.5615e-01 2.3850e-01 insignificant 1.00000000 1.0000e+00 insignificant 5.7755e-01 5.9688e-01 insignificant 1.0000000 1.000000 insignificant -0.00650742 0.805041 insignificant 1 insignificant 0.8310003 0.7854251 0.04327850 11 0.7270513 0.5653806 0.1616707 1.0918e-03 8.2066e-01 weaklyHypermeth 7.1831e-03 1.0000e+00 weaklyHypermeth 2.0931e-01 6.1486e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.9895e-02 5.4081e-01 insignificant 1.0000e+00 insignificant 0.8307956 0.8802867 -0.04635300 11 0.6826068 0.7618519 -0.0792451 9.9656e-01 3.3158e-03 weaklyHypometh 1.0000e+00 1.0048e-01 insignificant 9.9604e-01 4.1365e-02 weaklyHypometh 1.0000e+00 6.5165e-01 insignificant -5.0051e-02 5.7027e-02 insignificant 0.6954457 insignificant 0.8519971 0.7859554 0.05968287 10 0.6899654 0.5986382 0.0913272 1.3431e-03 9.8715e-01 weaklyHypermeth 9.5257e-03 1.0000e+00 weaklyHypermeth 2.3475e-01 7.7058e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0364026 4.7186e-01 insignificant 1.0000e+00 insignificant 0.8534050 0.8808327 -2.4588e-02 10 0.6973739 0.7945834 -0.09720947 9.9764e-01 2.2514e-02 weaklyHypometh 1.0000e+00 4.5946e-01 insignificant 8.7058e-01 1.0787e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04354406 0.12878143 insignificant 1.00000 insignificant 0.7864865 0.8809182 -0.06849469 11 0.5986382 0.8066667 -0.20802851 9.8641e-01 1.1229e-02 weaklyHypometh 1.0000e+00 6.9743e-02 weaklyHypometh 8.4690e-01 3.2372e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.0799467 1.3423e-01 insignificant 0.78104451 insignificant chr19 19349750 19350750 53142 KIAA0892 ENSG00000129933 0.6744438 430 11 0.7962868 246 13 0.6718367 191 10 0.8185459 291 11 0.6426523 308 10 0.8173630 499 10 0.6055512 248 11 0.7115443 267 11 0.7583604 185 8 0.7735452 194 10 0.7638334 414 11 0.8195616 120 9 0.7515129 326 13 0.6724271 215 10 0.7976264 311 11 0.7222222 78 7 0.8606120 368 5 0.82425668 485 14 0.7918860 308 11 0.8413959 389 10 0.7154048 120 4 0.8517969 129 9 0.7714771 275 11 0.7773644 156 9 0.8479114 146 10 0.7961760 307 11 0.7254122 143 8 0.8475082 128 6 0.6289510 315 11 0.69339020 352 8 0.7942114 296 11 0.6977639 439 11 0.5990138 339 11 0.8381018 199 11 0.6457222 333 11 0.8636364 28 1 0.677049 275 9 0.73174528 308 8 0.7829341 286 11 0.8356403 277 11 0.8302554 291 11 0.7478174 245 10 0.8324762 296 11 0.8563554 0.8742585 0.8058981 0.9182532 0.8367136 0.8879049 0.7713457 0.85913414 0.8811916 0.79539748 0.8506806 0.9039626 0.88400779 0.8888891 0.8697875 0.77888446 0.9003654 0.8841398 0.90644568 0.9313643 0.8336770 0.88931214 0.8913426 0.90183288 0.9231736 0.8524880 0.8029641 0.8933462 0.8373818 0.86473732 0.90379053 0.9101202 0.7594293 0.8614542 0.8550045 9.5817e-01 0.8241469 0.9083545 0.8980815 0.9078565 0.9008599 0.9169108 0.8882772 3 0.8312596 0.8517463 -1.3035e-02 10 0.7506275 0.6699690 0.08065848 3.5615e-01 2.3850e-01 insignificant 1.00000000 1.0000e+00 insignificant 5.7755e-01 5.9688e-01 insignificant 1.0000000 1.000000 insignificant -0.00650742 0.805041 insignificant 1 insignificant 0.8310003 0.7854251 0.04327850 11 0.7270513 0.5653806 0.1616707 1.0918e-03 8.2066e-01 weaklyHypermeth 7.1831e-03 1.0000e+00 weaklyHypermeth 2.0931e-01 6.1486e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.9895e-02 5.4081e-01 insignificant 1.0000e+00 insignificant 0.8307956 0.8802867 -0.04635300 11 0.6826068 0.7618519 -0.0792451 9.9656e-01 3.3158e-03 weaklyHypometh 1.0000e+00 1.0048e-01 insignificant 9.9604e-01 4.1365e-02 weaklyHypometh 1.0000e+00 6.5165e-01 insignificant -5.0051e-02 5.7027e-02 insignificant 0.6954457 insignificant 0.8519971 0.7859554 0.05968287 10 0.6899654 0.5986382 0.0913272 1.3431e-03 9.8715e-01 weaklyHypermeth 9.5257e-03 1.0000e+00 weaklyHypermeth 2.3475e-01 7.7058e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0364026 4.7186e-01 insignificant 1.0000e+00 insignificant 0.8534050 0.8808327 -2.4588e-02 10 0.6973739 0.7945834 -0.09720947 9.9764e-01 2.2514e-02 weaklyHypometh 1.0000e+00 4.5946e-01 insignificant 8.7058e-01 1.0787e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04354406 0.12878143 insignificant 1.00000 insignificant 0.7864865 0.8809182 -0.06849469 11 0.5986382 0.8066667 -0.20802851 9.8641e-01 1.1229e-02 weaklyHypometh 1.0000e+00 6.9743e-02 weaklyHypometh 8.4690e-01 3.2372e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.0799467 1.3423e-01 insignificant 0.78104451 insignificant chr19 21566950 21567950 53159 ZNF429 ENSG00000197013 0.8394661 142 6 0.6487472 202 6 0.4465934 84 6 0.7353175 90 6 0.7069444 45 5 0.7296808 326 6 0.5857143 33 4 0.7823184 97 6 0.7296958 49 6 0.7962963 48 5 0.8290363 237 6 0.6388889 19 1 0.7596050 79 6 0.8677249 25 3 0.7614087 69 5 0.9000000 14 0 0.4285714 16 1 0.80564375 126 6 0.7438821 117 6 0.7692783 257 6 0.7684848 38 5 0.7838828 48 5 0.7320078 127 6 0.7166667 33 5 0.7815476 40 6 0.7103395 167 6 0.6699495 41 4 0.6944444 16 0 0.7253739 64 5 0.78078902 241 6 0.7512994 278 6 0.7609091 344 6 0.4878664 182 6 0.2577358 81 5 0.5184385 65 5 0.4257576 22 1 0.551542 139 6 0.67291008 245 6 0.6416256 136 6 0.7174330 127 5 0.7965201 78 6 0.6455026 48 4 0.8247863 118 6 0.8619909 0.6831917 0.4476409 0.7676142 0.7307823 0.7658731 0.6422741 0.81727499 0.7596655 0.81632653 0.8465362 0.6700680 0.76809734 0.7875946 0.7745688 0.90930508 0.5237220 0.8415352 0.77417512 0.7902470 0.7577581 0.81105629 0.7461728 0.75306122 0.8143222 0.7587680 0.6955473 0.7074830 0.7611656 0.81390151 0.79295444 0.7941758 0.5207570 0.3044877 0.5397898 5.1276e-01 0.5655103 0.7096883 0.7006291 0.7501841 0.8253271 0.6927438 0.8665620 1 0.7686747 0.7933194 -1.8804e-02 6 0.7413885 0.7448718 -0.00348334 5.8817e-01 2.1935e-01 insignificant 1.00000000 1.0000e+00 insignificant 6.6984e-01 4.5639e-01 insignificant 1.0000000 1.000000 insignificant -0.01440055 0.633228 lowCoverage 1 lowCoverage 0.7686747 0.5667575 0.22182355 6 0.7413885 0.5457493 0.1956391 2.6126e-11 1.0000e+00 hypermethylated 3.6797e-10 1.0000e+00 hypermethylated 1.2866e-07 9.9998e-01 hypermethylated 3.0153e-06 1.0000e+00 hypermethylated 2.3953e-01 5.7763e-03 lowCoverage 7.5017e-02 lowCoverage 0.7686747 0.7672584 -0.00782364 6 0.7413885 0.7299575 0.0114310 4.5162e-01 4.7131e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.5731e-01 4.6551e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.7142e-05 9.9889e-01 lowCoverage 1.0000000 lowCoverage 0.7933194 0.5667575 0.23144266 6 0.7448718 0.5457493 0.1991225 3.5322e-11 9.9969e-01 hypermethylated 6.3075e-10 1.0000e+00 hypermethylated 2.4860e-06 9.9997e-01 hypermethylated 5.6501e-05 1.0000e+00 hypermethylated 0.2539329 5.8956e-03 lowCoverage 7.8608e-02 lowCoverage 0.7933194 0.7672584 1.3832e-02 6 0.7448718 0.7299575 0.01491432 3.7015e-01 7.8616e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.5991e-01 8.3264e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01446769 0.72819351 insignificant 1.00000 insignificant 0.5667575 0.7672584 -0.22771892 6 0.5457493 0.7299575 -0.18420815 9.9624e-01 1.8103e-05 hypomethylated 1.0000e+00 2.2076e-04 hypomethylated 9.9999e-01 1.7869e-04 hypomethylated 1.0000000 3.3549e-03 hypomethylated -0.2394652 7.2810e-03 lowCoverage 0.12553513 lowCoverage chr19 34275250 34276250 53180 ENSG00000209834 0.8611111 14 0 0.9809524 104 6 0.8591453 127 6 0.9000000 20 0 0.9618736 138 6 1.0000000 39 5 0.9548920 197 6 0.9693048 117 6 0.8855736 157 6 0.9283745 185 6 0.9533117 167 6 0.9671966 141 6 0.9657663 172 6 NA 0 0 0.9457672 135 6 0.9021103 114 5 0.9737374 75 6 1.00000000 20 0 0.9431821 148 6 0.9791667 45 5 0.9338624 42 5 NA 0 0 0.8968254 75 5 0.9148148 49 5 NA 0 0 0.9527080 187 6 0.9166667 19 0 0.9045455 51 6 0.9642319 214 6 0.91080351 288 6 0.9226641 168 6 0.9559814 85 6 0.9355604 148 6 0.9731288 173 6 0.9166667 170 6 0.9000000 10 0 0.950549 70 5 0.98664530 128 5 1.0000000 27 4 0.9408009 114 6 0.5000000 10 0 0.9000000 10 0 1.0000000 15 0 0.8188406 0.9809524 0.8698997 0.8913043 0.9605001 1.0000000 0.9445080 0.96374357 0.9188570 0.93674784 0.9599654 0.9651181 0.96538074 NA 0.9696342 0.96308825 0.9855072 1.0000000 0.93132452 0.9836957 0.9137336 NA 0.8840580 0.88888889 NA 0.9441118 0.8913043 0.8754941 0.9533460 0.88687736 0.92630105 0.9623473 0.9519607 0.9687313 0.8913043 8.8661e-01 0.9354993 0.9825808 1.0000000 0.9481461 0.5000000 0.8913043 1.0000000 0 0.9484634 0.9235993 2.4963e-02 5 0.9464273 0.9293502 0.01707708 3.7454e-02 3.2190e-01 weaklyHypermeth 1.00000000 1.0000e+00 insignificant 7.9192e-03 3.1368e-01 weaklyHypermeth 0.6599352 1.000000 insignificant 0.01645098 0.192988 lowCoverage 1 lowCoverage 0.9484634 0.9470672 0.00117971 6 0.9464273 0.9510982 -0.0046709 5.3691e-01 6.4184e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 6.4177e-01 6.0488e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 2.9096e-06 9.9986e-01 lowCoverage 1.0000e+00 lowCoverage 0.9484634 0.9375000 0.01216089 4 0.9464273 0.9317577 0.0146696 2.6012e-01 8.3857e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.1780e-01 5.2324e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.5601e-02 4.6754e-01 lowCoverage 1.0000000 lowCoverage 0.9235993 0.9470672 -0.02376413 5 0.9293502 0.9510982 -0.0217480 8.6372e-01 8.7748e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6143e-01 4.1153e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0164481 3.1583e-01 lowCoverage 1.0000e+00 lowCoverage 0.9235993 0.9375000 -1.4081e-02 4 0.9293502 0.9317577 -0.00240752 3.0742e-01 4.2346e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.2464e-01 1.8052e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.05915020 0.56394965 lowCoverage 1.00000 lowCoverage 0.9470672 0.9375000 0.01043338 4 0.9510982 0.9317577 0.01934049 2.3750e-01 8.3270e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 4.3704e-01 6.9399e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage 0.0755983 4.6876e-01 lowCoverage 1.00000000 lowCoverage chr19 38572950 38573950 53208 CEBPG ENSG00000153879 0.9323810 57 4 0.8220836 150 5 0.7712710 155 5 0.9105211 66 4 0.7188037 97 5 0.9022807 111 5 0.8276706 142 5 0.7876364 130 5 0.7858088 110 5 0.7995823 132 5 0.8203830 189 5 0.8308421 81 5 0.8367952 127 5 0.9044444 49 4 0.7903128 127 4 0.7416667 53 5 0.4642857 21 2 0.84242424 67 4 0.8958237 183 5 0.8594071 100 5 0.7477411 98 5 0.5312169 47 4 0.8120448 115 5 0.7024300 83 5 0.9272727 47 4 0.8503030 164 5 0.8137775 135 4 0.6484576 86 5 0.8427473 170 5 0.83646331 151 5 0.8233333 180 5 0.6925595 114 5 0.2314583 138 5 0.2950163 125 5 0.4244898 147 5 0.7904762 13 1 0.131874 136 5 0.21451071 229 5 0.4503677 94 4 0.6965812 76 4 0.7319712 54 4 0.7354839 35 1 0.6647727 42 4 0.8652425 0.7924703 0.7550862 0.8614271 0.8735016 0.8609526 0.7659357 0.80397338 0.7636142 0.77677059 0.8571235 0.7661289 0.81904100 0.8805036 0.7857294 0.72819315 0.6471664 0.7924101 0.91871689 0.8219701 0.8220864 0.65753103 0.7887641 0.80989075 0.9409516 0.8725573 0.6952881 0.7930109 0.8723914 0.83601973 0.83426791 0.8338924 0.2143503 0.2824717 0.3737364 6.3841e-01 0.1751943 0.2042608 0.5834000 0.7607237 0.6668015 0.8168526 0.5694562 4 0.8216116 0.8203463 1.2514e-04 5 0.8042312 0.6879836 0.11624762 2.3285e-01 7.4676e-01 insignificant 1.00000000 1.0000e+00 insignificant 3.5412e-01 8.9325e-01 insignificant 1.0000000 1.000000 insignificant 0.04319228 0.275094 lowCoverage 1 lowCoverage 0.8216116 0.2284264 0.57674857 5 0.8042312 0.2040547 0.6001765 1.0722e-40 1.0000e+00 hypermethylated 8.9354e-39 1.0000e+00 hypermethylated 8.5496e-07 1.0000e+00 hypermethylated 1.5833e-05 1.0000e+00 hypermethylated 4.6425e-01 4.2509e-03 lowCoverage 5.9872e-02 lowCoverage 0.8216116 0.6710963 0.14503239 4 0.8042312 0.5427786 0.2614527 3.2823e-08 9.8680e-01 lowCoverage 4.6890e-06 1.0000e+00 lowCoverage 3.8822e-03 9.8303e-01 lowCoverage 1.3865e-01 1.0000e+00 lowCoverage 1.5639e-01 3.7711e-02 lowCoverage 0.5376914 lowCoverage 0.8203463 0.2284264 0.57686116 5 0.6879836 0.2040547 0.4839289 2.7928e-25 1.0000e+00 hypermethylated 1.3299e-23 1.0000e+00 hypermethylated 6.5201e-05 1.0000e+00 hypermethylated 8.8109e-04 1.0000e+00 hypermethylated 0.4210580 6.0053e-03 lowCoverage 7.9017e-02 lowCoverage 0.8203463 0.6710963 1.4497e-01 4 0.6879836 0.5427786 0.14520503 1.2051e-04 9.9898e-01 lowCoverage 6.0254e-03 1.0000e+00 lowCoverage 3.3572e-02 9.7954e-01 lowCoverage 8.1882e-01 1.0000e+00 lowCoverage 0.11319360 0.10865402 lowCoverage 1.00000 lowCoverage 0.2284264 0.6710963 -0.43353215 4 0.2040547 0.5427786 -0.33872387 1.0000e+00 1.0301e-08 lowCoverage 1.0000e+00 2.3411e-07 lowCoverage 9.9967e-01 1.1225e-02 lowCoverage 1.0000000 9.7195e-02 lowCoverage -0.3078644 2.5039e-02 lowCoverage 0.24076357 lowCoverage chr19 39002750 39003750 53212 KCTD15 ENSG00000153885 0.1568073 1478 39 0.0843510 1526 44 0.2397132 1509 41 0.1020913 1065 31 0.1206998 1146 43 0.1250043 2016 45 0.1384178 1842 44 0.1520004 1569 46 0.0617986 2105 44 0.0784003 1919 45 0.1281573 1585 45 0.0978674 1789 46 0.1221306 1740 44 0.0810725 530 18 0.0682005 2051 45 0.0415898 1344 43 0.0526774 1562 41 0.08075729 1475 38 0.0856264 1465 45 0.0941446 1639 44 0.0910896 642 42 0.1036383 820 34 0.1074364 1344 44 0.0860217 876 43 0.2169403 622 26 0.1496230 1887 43 0.1122311 1037 42 0.0790610 758 43 0.1053113 1232 43 0.08593455 2144 45 0.0689104 1743 43 0.1780241 1886 44 0.0449152 1414 42 0.0750001 1073 42 0.0627552 1338 26 0.0232842 529 31 0.076288 939 41 0.02866780 1607 44 0.1153004 1541 40 0.1224978 1630 42 0.0766788 1165 34 0.0672430 1355 38 0.0895935 1368 34 0.1241097 0.0725203 0.2401041 0.0626392 0.0971729 0.0812500 0.1581017 0.08956384 0.0651751 0.07289578 0.0999669 0.0855266 0.09882555 0.0770236 0.0692368 0.05254466 0.0604363 0.0659813 0.05659963 0.0826138 0.1048298 0.05713298 0.0961319 0.05626392 0.1564372 0.1557827 0.0876445 0.0586665 0.1036002 0.06673304 0.06725628 0.1527792 0.0429555 0.0639177 0.0580788 1.1886e-02 0.0529794 0.0127242 0.1233496 0.1078666 0.0760767 0.0785963 0.0861375 30 0.0887259 0.1128989 -6.3230e-03 44 0.1132789 0.1250314 -0.01175250 6.1337e-01 7.9708e-01 insignificant 1.00000000 1.0000e+00 insignificant 3.5762e-01 9.7672e-01 insignificant 1.0000000 1.000000 insignificant -0.00977644 0.553278 insignificant 1 insignificant 0.0887315 0.0532038 0.05567237 44 0.1155445 0.0479961 0.0675484 5.0369e-21 1.0000e+00 weaklyHypermeth 1.4391e-19 1.0000e+00 weaklyHypermeth 1.9688e-22 1.0000e+00 weaklyHypermeth 3.2814e-20 1.0000e+00 weaklyHypermeth 5.3757e-02 1.1322e-03 weaklyHypermeth 1.9863e-02 weaklyHypermeth 0.0886420 0.1092223 -0.00375328 40 0.1130672 0.0911201 0.0219471 1.7683e-02 2.7465e-01 inconclusive 3.2151e-01 1.0000e+00 insignificant 4.8684e-02 2.6882e-01 inconclusive 1.0000e+00 1.0000e+00 insignificant 1.1313e-02 4.5640e-01 insignificant 1.0000000 insignificant 0.1128537 0.0531884 0.06702578 44 0.1226270 0.0461501 0.0764769 9.8650e-18 1.0000e+00 weaklyHypermeth 2.9015e-16 1.0000e+00 weaklyHypermeth 5.7848e-13 1.0000e+00 weaklyHypermeth 4.1320e-11 1.0000e+00 weaklyHypermeth 0.0635335 1.0316e-03 weaklyHypermeth 1.8654e-02 weaklyHypermeth 0.1128332 0.1092223 4.2923e-03 40 0.1050681 0.0911201 0.01394800 4.9701e-02 6.4277e-01 weaklyHypermeth 8.0163e-01 1.0000e+00 insignificant 2.0071e-01 7.3641e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02108910 0.22738158 insignificant 1.00000 insignificant 0.0532579 0.1092377 -0.06444054 40 0.0510597 0.0930588 -0.04199914 9.9998e-01 1.9473e-17 weaklyHypometh 1.0000e+00 1.1455e-15 weaklyHypometh 1.0000e+00 3.4164e-09 weaklyHypometh 1.0000000 2.6280e-07 weaklyHypometh -0.0424444 1.6575e-02 weaklyHypometh 0.19969861 insignificant chr19 39400750 39401750 53216 LSM14A ENSG00000105216 0.5211015 153 6 0.3710317 64 5 0.4104185 91 6 0.4392544 94 6 0.6428571 38 3 0.5121392 65 6 0.3385417 57 6 0.5158800 74 6 0.5222222 32 4 0.5494505 34 1 0.5289511 96 6 0.3125000 22 1 0.9094203 30 1 0.4705882 29 1 0.5416667 29 1 0.6666667 16 1 NA 0 0 0.55328107 83 6 0.5277778 65 6 0.6562500 47 3 0.3833333 22 1 0.7500000 4 0 0.5379121 95 6 0.7111111 34 5 1.0000000 12 1 0.4615823 140 6 0.4694264 59 6 0.5729167 24 0 0.5002815 55 1 0.40808031 133 8 0.6160590 134 8 0.5237179 67 6 0.4485431 78 6 0.3737374 79 6 0.4691975 79 6 0.5000000 6 1 0.514766 65 4 0.33618881 122 6 0.6331845 121 6 0.6863446 173 6 0.4282095 61 3 0.6406250 80 3 0.5346726 85 6 0.7995385 0.6629142 0.6780229 0.6828255 0.8095238 0.6015620 0.6228070 0.68876620 0.6836257 0.64271255 0.6848773 0.6081871 0.92448513 0.6264190 0.7602339 0.90278708 NA 0.7630840 0.74756335 0.7270259 0.4736842 0.84266262 0.7344130 0.84093567 0.9303819 0.7423106 0.6973115 0.7763158 0.6912439 0.71718765 0.75458090 0.7513270 0.6604711 0.4918926 0.7445814 NA 0.6529433 0.6053777 0.8166249 0.7234911 0.6284258 0.8377193 0.7807018 1 0.6478999 0.6405648 -1.8376e-02 6 0.4929239 0.5029951 -0.01007123 7.2673e-01 1.6007e-01 insignificant 1.00000000 1.0000e+00 insignificant 9.3263e-01 7.1442e-02 insignificant 1.0000000 1.000000 insignificant -0.05207899 0.386552 lowCoverage 1 lowCoverage 0.6478999 0.5547786 0.09789165 6 0.4929239 0.3853940 0.1075298 1.8576e-03 9.9629e-01 weaklyHypermeth 1.1832e-02 1.0000e+00 weaklyHypermeth 5.4659e-03 9.9348e-01 weaklyHypermeth 4.5550e-02 1.0000e+00 weaklyHypermeth 8.5384e-02 6.0586e-02 lowCoverage 4.4879e-01 lowCoverage 0.6478999 0.7288462 -0.05653565 6 0.4929239 0.5691562 -0.0762324 9.8615e-01 3.0655e-02 weaklyHypometh 1.0000e+00 4.7212e-01 insignificant 9.9838e-01 1.3068e-02 weaklyHypometh 1.0000e+00 3.4388e-01 insignificant -5.8818e-02 3.2147e-01 lowCoverage 1.0000000 lowCoverage 0.6405648 0.5547786 0.11723888 6 0.5029951 0.3853940 0.1176011 1.2314e-04 9.9979e-01 weaklyHypermeth 1.0616e-03 1.0000e+00 weaklyHypermeth 5.4060e-04 9.9972e-01 weaklyHypermeth 5.8129e-03 1.0000e+00 weaklyHypermeth 0.1374629 3.0399e-02 lowCoverage 2.5254e-01 lowCoverage 0.6405648 0.7288462 -4.1975e-02 6 0.5029951 0.5691562 -0.06616113 9.4296e-01 3.5768e-02 weaklyHypometh 1.0000e+00 6.1669e-01 insignificant 8.8563e-01 1.5367e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00673884 0.92272889 lowCoverage 1.00000 lowCoverage 0.5547786 0.7288462 -0.15490901 6 0.3853940 0.5691562 -0.18376219 9.9996e-01 1.8352e-06 weaklyHypometh 1.0000e+00 2.9130e-05 weaklyHypometh 9.9998e-01 1.8116e-04 weaklyHypometh 1.0000000 3.3549e-03 weaklyHypometh -0.1442017 3.3788e-02 lowCoverage 0.29901029 lowCoverage chr19 39541450 39542450 53224 ENSG00000174717 0.0101424 1026 27 0.0080749 1266 29 0.0125591 1354 29 0.0035317 1138 21 0.0094273 733 25 0.0780033 1535 25 0.0114541 1217 25 0.0046154 943 25 0.0392247 1357 25 0.0078802 1176 25 0.0141522 831 25 0.0062038 1042 25 0.0070167 971 25 0.0077338 581 16 0.0146517 1416 25 0.0079494 921 25 0.0082819 817 22 0.03185746 1482 24 0.0132789 704 25 0.0923067 1020 24 0.0340933 403 25 0.0071112 855 21 0.0096012 1004 29 0.0114515 505 25 0.0043369 514 21 0.0085613 1393 29 0.0335607 829 25 0.0532016 497 21 0.0025418 689 25 0.00447394 1437 29 0.0332396 1343 29 0.0345975 1217 26 0.0084997 775 29 0.0130864 659 25 0.0000000 236 10 0.0280460 262 13 0.029773 537 24 0.00045372 1077 29 0.0173181 1289 24 0.0054021 1122 28 0.0184189 895 21 0.0818406 1014 21 0.0220031 1143 21 0.0181086 0.0036007 0.0078974 0.0059406 0.0066685 0.0108277 0.0034631 0.00035398 0.0053465 0.00827893 0.0154340 0.0095769 0.00633359 0.0106812 0.0100791 0.00950273 0.0080818 0.0111325 0.00696320 0.0184255 0.0307145 0.00763874 0.0086414 0.00834249 0.0040903 0.0054996 0.0064788 0.0075017 0.0047165 0.00554170 0.00292736 0.0097940 0.0115493 0.0141007 0.0048894 2.7247e-02 0.0245552 0.0013895 0.0218680 0.0048520 0.0212256 0.0092777 0.0167186 21 0.0116582 0.0081415 3.3901e-03 25 0.0559589 0.0253019 0.03065698 6.4045e-01 9.9996e-01 insignificant 1.00000000 1.0000e+00 insignificant 6.7238e-01 9.9999e-01 insignificant 1.0000000 1.000000 insignificant -0.00031359 0.965965 insignificant 1 insignificant 0.0113636 0.0087422 0.00312364 25 0.0430056 0.0064558 0.0365498 1.8700e-01 9.6079e-01 insignificant 8.0603e-01 1.0000e+00 insignificant 3.0464e-01 9.9993e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.1075e-03 4.3328e-01 insignificant 1.0000e+00 insignificant 0.0115066 0.0142779 -0.00608697 21 0.0313572 0.0434527 -0.0120955 9.7622e-01 1.8563e-02 weaklyHypometh 1.0000e+00 3.7125e-01 insignificant 9.6059e-01 4.3067e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -9.5793e-03 5.3745e-01 insignificant 1.0000000 insignificant 0.0075103 0.0087422 -0.00127045 28 0.0140271 0.0064558 0.0075713 6.8452e-01 8.6095e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.6719e-01 9.9896e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0064211 3.9082e-01 insignificant 1.0000e+00 insignificant 0.0081568 0.0142779 -8.1636e-03 21 0.0309245 0.0434527 -0.01252811 9.9949e-01 9.2809e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9975e-01 5.3173e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00926570 0.54668797 insignificant 1.00000 insignificant 0.0087546 0.0141103 -0.00764831 21 0.0073166 0.0188099 -0.01149330 9.9803e-01 2.1774e-01 insignificant 1.0000e+00 9.3053e-01 insignificant 9.9998e-01 3.4123e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.0156868 3.2709e-01 insignificant 1.00000000 insignificant chr19 40307050 40308050 53236 FXYD3 ENSG00000089356 0.9055666 408 9 0.7787433 73 7 0.4352381 57 7 0.6211752 409 5 0.3409775 153 8 0.6244375 493 8 0.4447700 160 8 0.8000000 77 6 0.2952381 47 5 0.7724518 67 6 0.5013889 117 11 0.6142857 50 5 0.5930736 70 7 0.3703704 19 0 0.8265152 68 8 0.2777778 16 0 0.5000000 2 0 NA 0 0 0.9593343 348 7 0.9595694 159 5 0.6416667 90 10 0.8181818 64 5 0.7456427 91 5 0.3766234 32 2 0.9596591 173 6 0.8835979 100 7 0.5625000 14 1 0.2000000 11 0 0.8750000 6 0 0.97034632 125 7 0.9883167 243 8 0.7528105 277 8 0.1887446 188 8 0.1742424 183 7 0.0000000 37 5 NA 0 0 0.136124 71 7 0.16883117 397 7 0.8110582 300 5 0.8153209 124 6 0.5764569 215 5 0.4142857 351 5 NA 0 0 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0.6216410 0.8040816 -1.7392e-01 6 0.5280996 0.6435329 -0.11543328 9.6577e-01 7.5652e-04 weaklyHypometh 1.00000000 1.6426e-01 insignificant 9.9998e-01 4.7376e-04 weaklyHypometh 1.0000000 0.236878 insignificant -0.11956840 0.186898 lowCoverage 1 lowCoverage 0.6220868 0.0719178 0.55610867 6 0.5687227 0.1714277 0.3972950 4.8787e-23 1.0000e+00 hypermethylated 1.6823e-21 1.0000e+00 hypermethylated 9.1052e-15 1.0000e+00 hypermethylated 5.0584e-13 1.0000e+00 hypermethylated 4.7804e-01 2.0555e-07 hypermethylated 1.1419e-05 hypermethylated 0.6225332 0.6484848 -0.05388113 5 0.6161163 0.7013199 -0.0852036 9.9588e-01 2.1775e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9998e-01 5.2044e-02 insignificant 1.0000e+00 7.2708e-01 insignificant -4.2653e-02 7.1498e-01 lowCoverage 1.0000000 lowCoverage 0.8060556 0.0719178 0.71448678 6 0.6930355 0.1714277 0.5216078 4.5631e-35 1.0000e+00 hypermethylated 4.1483e-33 1.0000e+00 hypermethylated 1.0520e-11 1.0000e+00 hypermethylated 5.5369e-10 1.0000e+00 hypermethylated 0.5976070 2.1308e-06 lowCoverage 1.1838e-04 lowCoverage 0.8067158 0.6484848 1.4898e-01 5 0.7507884 0.7013199 0.04946851 2.9381e-01 8.5773e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.6708e-01 9.5827e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.07691500 0.54604911 lowCoverage 1.00000 lowCoverage 0.0710195 0.6491405 -0.63615808 5 0.1571418 0.7650763 -0.60793443 1.0000e+00 1.2870e-13 hypomethylated 1.0000e+00 5.1482e-12 hypomethylated 1.0000e+00 5.6862e-09 hypomethylated 1.0000000 4.0616e-07 hypomethylated -0.5206920 8.6438e-03 lowCoverage 0.13804252 lowCoverage chr19 40323650 40324650 53237 ENSG00000203403 0.0046296 207 14 0.0555556 129 7 0.0337977 237 14 0.0856481 208 13 0.1325758 131 8 0.1629710 307 15 0.2131002 227 16 0.0250000 136 9 0.0659091 195 11 0.0462778 178 9 0.0959445 214 13 0.0783333 265 14 0.0500000 208 15 0.0500000 24 1 0.0555556 185 14 0.0233918 293 14 0.0226891 183 9 0.09343434 224 14 0.0921053 141 9 0.0378313 328 14 0.1795455 84 6 0.0000000 278 12 0.0822446 193 9 0.0882353 89 7 0.1516204 256 13 0.0302640 271 14 0.0293750 188 12 0.0591787 120 9 0.0892496 204 14 0.04027778 275 14 0.0181624 198 12 0.0067826 283 12 0.0415995 125 7 0.0029240 161 14 0.0000000 31 2 0.0039062 161 12 0.063636 96 7 0.03703704 172 7 0.1153846 242 12 0.1184211 217 12 0.0555556 174 13 0.0294118 271 14 0.0088829 217 15 0.0084635 0.0000000 0.0152803 0.0094401 0.0343750 0.0056901 0.0096036 0.00000000 0.0078125 0.00435213 0.0294276 0.0000000 0.00000000 NA 0.0026042 0.01128472 0.0118304 0.0021701 0.00846354 0.0248255 0.0596591 0.00074758 0.0040345 0.00000000 0.0079172 0.0194668 0.0234049 0.0112847 0.0224964 0.00564236 0.00781250 0.0103329 0.0095262 0.0024671 0.0110069 1.2207e-03 0.0450968 0.0000000 0.0078125 0.0000000 0.0000000 0.0000000 0.0125552 6 0.0253731 0.0209102 -1.9160e-03 14 0.1283172 0.1584534 -0.03013620 9.5512e-01 5.4598e-01 insignificant 1.00000000 1.0000e+00 insignificant 9.9045e-01 5.1185e-01 insignificant 1.0000000 1.000000 insignificant 0.00665952 0.741198 insignificant 1 insignificant 0.0251306 0.0201072 -0.00025238 7 0.0934499 0.0431417 0.0503082 7.0872e-01 8.8282e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 8.4909e-01 8.2030e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.6387e-02 8.9165e-03 weaklyHypermeth 1.0490e-01 insignificant 0.0228542 0.0098127 0.00300432 14 0.0826535 0.1128424 -0.0301889 9.4374e-01 7.5121e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8849e-01 7.2669e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.7063e-03 8.2681e-01 insignificant 1.0000000 insignificant 0.0205086 0.0201072 0.00423724 7 0.1247916 0.0431417 0.0816498 6.8772e-01 9.1453e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.4440e-01 9.9986e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0397275 5.8635e-02 insignificant 3.9888e-01 insignificant 0.0186645 0.0098127 5.2602e-03 14 0.1020761 0.1128424 -0.01076628 7.1230e-01 3.9549e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.9387e-01 6.7018e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00095320 0.97320801 insignificant 1.00000 insignificant 0.0177839 0.0098127 0.00093516 7 0.0286835 0.1128424 -0.08415893 9.7573e-01 9.6682e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9931e-01 9.4164e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.0406807 1.5217e-01 insignificant 0.83611473 insignificant chr19 40501450 40502450 53247 MAG ENSG00000105695 0.8977808 183 6 0.6600000 23 2 0.6666667 12 0 0.8948788 170 6 0.6000000 5 0 0.9222720 175 6 0.9583333 17 2 0.8837302 58 4 0.8000000 12 2 1.0000000 16 2 0.9702381 78 4 NA 0 0 0.7000000 14 2 1.0000000 15 2 0.8500000 14 2 NA 0 0 NA 0 0 0.60849960 270 6 0.8338807 89 6 0.9593344 102 6 1.0000000 15 0 0.9318182 24 2 0.7559524 44 2 0.8214286 21 2 0.8113506 136 4 0.7933159 101 6 0.7464286 47 3 0.5000000 4 0 0.9004630 62 2 0.86250000 55 4 0.6922306 71 6 0.9089286 133 6 0.4078947 58 4 0.3559524 110 4 0.2661943 83 2 0.1406250 78 4 0.363333 53 4 0.40544218 149 6 0.7479277 87 6 0.8613399 128 6 0.6825747 164 4 0.5111111 114 4 0.7436931 104 6 0.8768424 0.9333333 0.6666667 0.9196013 1.0000000 0.8921630 0.9444444 0.84497354 0.7333333 1.00000000 0.9603175 NA 0.76666667 1.0000000 0.8000000 NA NA 0.6595196 0.66794381 0.9051136 1.0000000 0.90909091 0.9285714 1.00000000 0.7787705 0.8258179 0.9107143 0.6666667 0.8672840 0.79027778 0.74853801 0.9333333 0.5438596 0.4746032 0.3549258 4.3023e-01 0.2722222 0.5333333 0.6291887 0.7574122 0.6835833 0.5555556 0.7049808 0 0.8482428 0.8471248 -3.9881e-03 4 0.7684244 0.7023382 0.06608614 2.5274e-01 8.6621e-01 lowCoverage 1.00000000 1.0000e+00 lowCoverage 6.9178e-01 9.4802e-01 lowCoverage 1.0000000 1.000000 lowCoverage 0.02525636 0.621898 lowCoverage 1 lowCoverage 0.8482428 0.4576271 0.33060779 4 0.7684244 0.3967171 0.3717073 3.4350e-19 1.0000e+00 lowCoverage 9.0395e-18 1.0000e+00 lowCoverage 1.1246e-07 9.9980e-01 lowCoverage 2.8836e-06 1.0000e+00 lowCoverage 5.1238e-01 6.6736e-07 lowCoverage 3.5124e-05 lowCoverage 0.8496000 0.7504188 0.09650210 4 0.8781993 0.7565567 0.1216426 4.5961e-03 9.9716e-01 lowCoverage 1.1785e-01 1.0000e+00 lowCoverage 1.9302e-03 9.9855e-01 lowCoverage 8.0156e-02 1.0000e+00 lowCoverage 1.2630e-01 9.9082e-02 lowCoverage 0.9619634 lowCoverage 0.8471248 0.4576271 0.35440815 4 0.7023382 0.3967171 0.3056212 5.4523e-16 1.0000e+00 lowCoverage 1.3980e-14 1.0000e+00 lowCoverage 6.7416e-08 9.9982e-01 lowCoverage 2.1747e-06 1.0000e+00 lowCoverage 0.4871277 1.2513e-06 lowCoverage 8.3420e-05 lowCoverage 0.8495077 0.7504188 1.0470e-01 4 0.8026723 0.7565567 0.04611553 1.9581e-03 9.2392e-01 lowCoverage 6.1011e-02 1.0000e+00 lowCoverage 8.4530e-04 9.9055e-01 lowCoverage 7.6845e-02 1.0000e+00 lowCoverage 0.10103873 0.18102140 lowCoverage 1.00000 lowCoverage 0.4566038 0.7504188 -0.28150687 6 0.3105338 0.7565567 -0.44602292 1.0000e+00 2.0911e-11 hypomethylated 1.0000e+00 6.7456e-10 hypomethylated 9.9996e-01 9.6408e-04 hypomethylated 1.0000000 1.3207e-02 hypomethylated -0.3860890 7.1633e-04 lowCoverage 0.02755133 lowCoverage chr19 40855550 40856550 53252 UPK1A ENSG00000105668 0.1295743 367 13 0.1187208 539 17 0.1631526 496 15 0.1218487 176 6 0.0234205 334 15 0.2031918 511 16 0.1424276 616 17 0.1154832 354 15 0.1857493 312 13 0.0150284 288 15 0.0568825 618 17 0.1267118 339 15 0.0950768 333 15 0.2500000 85 6 0.0564348 475 15 0.0496203 357 15 0.0191629 203 10 0.00062189 406 11 0.0318478 464 15 0.2090457 423 15 0.0763889 199 13 0.1916667 100 7 0.1599138 346 17 0.0442584 281 15 0.1824118 447 7 0.1263275 621 17 0.1085749 405 14 0.1382906 115 11 0.0813708 312 17 0.09514408 624 17 0.2032461 604 17 0.0865262 452 15 0.0586058 379 17 0.0112045 404 15 0.0850701 354 10 0.0363933 295 16 0.122738 291 14 0.07772406 419 17 0.2000078 354 11 0.0555526 347 15 0.1785714 154 5 0.1413387 283 10 0.1375000 201 11 0.0263493 0.0139880 0.0757314 0.0151860 0.0110731 0.0523088 0.0212746 0.01135095 0.0276840 0.01269829 0.0187463 0.1185591 0.03751674 0.0104338 0.0031646 0.05567490 0.0248857 0.0011786 0.04581115 0.0535458 0.0254366 0.04335611 0.0315809 0.00745496 0.0957356 0.0157312 0.0310633 0.0413294 0.0364998 0.01007608 0.00908965 0.0359616 0.0227097 0.0092265 0.0226576 7.5930e-03 0.0338184 0.0251890 0.0515874 0.0346734 0.0356370 0.0738217 0.0676917 7 0.0348233 0.0386323 1.2820e-03 15 0.1828517 0.1770360 0.00581576 8.4737e-01 4.8028e-01 insignificant 1.00000000 1.0000e+00 insignificant 7.5201e-01 6.8682e-01 insignificant 1.0000000 1.000000 insignificant -0.01880988 0.398652 insignificant 1 insignificant 0.0340835 0.0308411 0.00881545 15 0.1396043 0.1125708 0.0270335 4.6170e-01 9.8956e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.6901e-01 9.9040e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.0411e-02 9.5166e-02 insignificant 6.3024e-01 insignificant 0.0335937 0.0463032 -0.01907435 12 0.1057759 0.2161931 -0.1104172 9.7889e-01 2.6648e-03 weaklyHypometh 1.0000e+00 8.8827e-02 weaklyHypometh 9.3883e-01 1.9429e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -3.6894e-02 2.4784e-01 insignificant 1.0000000 insignificant 0.0377862 0.0308267 0.01089110 16 0.1054739 0.1076764 -0.0022025 3.6405e-01 9.2694e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.4356e-01 9.8569e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0592206 1.7457e-02 weaklyHypermeth 1.7582e-01 insignificant 0.0380423 0.0463032 -2.0562e-02 12 0.1440905 0.2161931 -0.07210261 9.8279e-01 2.6909e-02 weaklyHypometh 1.0000e+00 5.1747e-01 insignificant 9.7689e-01 3.5039e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01808415 0.54932336 insignificant 1.00000 insignificant 0.0290807 0.0448766 -0.02761772 12 0.0513977 0.1336871 -0.08228933 9.9225e-01 1.5015e-03 weaklyHypometh 1.0000e+00 1.2012e-02 weaklyHypometh 9.9122e-01 8.4135e-02 insignificant 1.0000000 4.8916e-01 insignificant -0.0773047 3.3722e-02 weaklyHypometh 0.29901029 insignificant chr19 41027250 41028250 53253 ENSG00000221873 0.0843254 220 6 0.0588257 507 6 0.1149581 287 6 0.1733527 183 6 0.0475238 140 6 0.2885484 405 6 0.0347744 321 6 0.0802682 320 6 0.0723277 254 6 0.2247298 288 6 0.2371980 521 6 0.0724306 104 6 0.0463083 263 6 0.1198633 203 6 0.1388773 326 6 0.0805153 125 6 0.0000000 1 0 0.07760442 308 6 0.3143102 488 6 0.0628425 357 6 0.0702304 183 6 0.1490378 186 6 0.1543843 298 6 0.0405432 210 6 0.1254630 101 6 0.0909479 454 6 0.0457623 459 6 0.0322823 157 6 0.0561623 477 6 0.27873861 613 6 0.1951401 518 6 0.0572439 371 6 0.1080734 337 6 0.0118712 348 6 0.3279570 275 6 0.1250000 26 3 0.213769 327 7 0.19864409 570 6 0.2048642 267 6 0.0619423 215 6 0.0861472 161 6 0.1458497 255 6 0.1861317 171 6 0.1119609 0.0774932 0.1517293 0.1781974 0.0952407 0.2693447 0.0635764 0.13841075 0.0873637 0.16041511 0.1852756 0.1047187 0.05995658 0.1538790 0.1300021 0.08073156 NA 0.1477086 0.09955845 0.1031906 0.1366492 0.09665528 0.1937624 0.13144521 0.1562371 0.1377447 0.0883025 0.0122627 0.1294752 0.10455761 0.06957422 0.1098840 0.1309547 0.0159286 0.4305954 2.1286e-01 0.0595682 0.2549122 0.1339031 0.1048214 0.1319034 0.1909569 0.0719688 6 0.1151041 0.0902761 2.1928e-02 6 0.1453105 0.0860224 0.05928813 6.4732e-02 1.0000e+00 insignificant 1.00000000 1.0000e+00 insignificant 3.2958e-01 9.9995e-01 insignificant 1.0000000 1.000000 insignificant 0.00848452 0.773171 insignificant 1 insignificant 0.1147043 0.1375465 -0.03455635 6 0.1303612 0.2305295 -0.1001683 7.8746e-01 8.7553e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 7.3385e-01 8.3039e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -4.7740e-02 3.5470e-01 insignificant 1.0000e+00 insignificant 0.1149384 0.1131899 0.00126856 6 0.1603612 0.2132364 -0.0528752 1.9550e-01 6.4891e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.6171e-01 7.7582e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -2.0508e-02 5.6026e-01 insignificant 1.0000000 insignificant 0.0901578 0.1375465 -0.05454188 6 0.0729047 0.2305295 -0.1576248 9.9547e-01 2.0381e-03 weaklyHypometh 1.0000e+00 1.0727e-01 insignificant 9.0504e-01 2.8174e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0562244 2.8773e-01 insignificant 1.0000e+00 insignificant 0.0903630 0.1131899 -2.0491e-02 6 0.0929047 0.2132364 -0.12033170 6.4825e-01 3.4564e-02 weaklyHypometh 1.0000e+00 6.0639e-01 insignificant 4.2847e-01 2.2015e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02899233 0.43047070 insignificant 1.00000 insignificant 0.1369206 0.1125704 0.03527299 6 0.1381619 0.1415455 -0.00338364 1.4798e-01 9.3083e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.7238e-01 8.7994e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.0272321 6.1490e-01 insignificant 1.00000000 insignificant chr19 41092550 41093550 53254 TYROBP ENSG00000011600 0.7767907 136 5 0.6960122 116 3 0.7112637 70 5 0.7768539 123 5 0.8000000 22 2 0.7259953 271 5 0.5726190 26 2 0.6640090 140 5 0.6578947 74 5 0.6965521 119 5 0.7663992 167 5 0.6199495 24 1 0.6199496 164 5 0.5886364 76 5 0.7570779 97 5 0.7500000 15 2 0.7000000 8 1 0.64926341 198 5 0.8574098 110 4 0.6669551 146 5 0.7332428 55 3 0.8664864 79 4 0.7406760 57 3 0.6435897 42 5 0.7100000 51 4 0.7094678 202 5 0.7079832 83 2 0.6119048 17 1 0.7394741 136 5 0.68734694 139 5 0.8183881 143 5 0.6469812 175 5 0.5947320 99 3 0.5729217 74 5 0.8313492 33 3 0.5000000 14 0 0.578193 89 5 0.72186255 154 5 0.7048366 63 5 0.8244803 122 5 0.8397234 103 5 0.7186555 46 5 0.8045704 126 5 0.7237072 0.7049205 0.6479267 0.7814959 0.7777778 0.7634570 0.5674603 0.67332432 0.6515789 0.70805718 0.7159737 0.7366667 0.65761440 0.6050000 0.7519870 0.77187709 0.6337471 0.6489446 0.83581052 0.7276495 0.7706763 0.78735043 0.6769231 0.76512821 0.6920000 0.7001778 0.6596452 0.6226667 0.7737328 0.74735238 0.78569640 0.7661296 0.6169060 0.5264148 0.7271144 5.3778e-01 0.6902958 0.7329334 0.6876688 0.7453711 0.7210271 0.6890756 0.8071695 0 0.7844910 0.7935154 -2.0594e-02 5 0.6849309 0.6439947 0.04093617 5.9746e-01 1.4885e-01 insignificant 1.00000000 1.0000e+00 insignificant 8.4106e-01 1.5832e-01 insignificant 1.0000000 1.000000 insignificant -0.01528016 0.570250 lowCoverage 1 lowCoverage 0.7846594 0.6911447 0.07613986 5 0.6663397 0.5514048 0.1149348 2.2340e-02 9.5360e-01 weaklyHypermeth 1.1635e-01 1.0000e+00 insignificant 1.6107e-01 9.3770e-01 insignificant 8.1348e-01 1.0000e+00 insignificant 6.9505e-02 2.2897e-01 lowCoverage 1.0000e+00 lowCoverage 0.7852702 0.7685590 -0.01516596 5 0.7258635 0.8254255 -0.0995620 9.0106e-01 2.1926e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.5584e-01 2.3205e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -7.5772e-02 5.1546e-02 lowCoverage 0.6694246 lowCoverage 0.7941681 0.6911447 0.09446456 5 0.6375170 0.5514048 0.0861122 1.3672e-02 8.9079e-01 weaklyHypermeth 7.5533e-02 1.0000e+00 weaklyHypermeth 1.6949e-02 9.3331e-01 weaklyHypermeth 1.2282e-01 1.0000e+00 insignificant 0.0847854 1.5809e-01 lowCoverage 8.8167e-01 lowCoverage 0.7982833 0.7695652 1.3193e-03 5 0.7378869 0.8472473 -0.10936040 8.0982e-01 3.6878e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.5282e-01 6.7739e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.06049148 0.11665213 lowCoverage 1.00000 lowCoverage 0.6965066 0.7670330 -0.08098062 5 0.6719668 0.7555957 -0.08362891 9.2381e-01 4.2801e-02 weaklyHypometh 1.0000e+00 2.2527e-01 insignificant 7.3466e-01 2.9845e-02 weaklyHypometh 1.0000000 2.1318e-01 insignificant -0.1452769 3.4429e-02 lowCoverage 0.30200988 lowCoverage chr19 43365550 43366550 53257 ENSG00000221258 0.1600605 345 8 0.0732759 279 9 0.1060043 433 9 0.0994249 404 10 0.1145865 358 11 0.1824285 546 12 0.2586018 363 10 0.2503218 429 9 0.2022782 358 10 0.1823196 599 10 0.2002148 374 9 0.0360817 444 11 0.0458626 267 9 0.0365917 347 7 0.0908881 320 9 0.1385501 364 7 0.1190476 51 3 0.22064373 302 9 0.0964992 629 9 0.1881919 283 10 0.2392344 156 10 0.0724978 187 9 0.1730942 243 9 0.1524024 213 11 0.1295986 149 8 0.2383866 616 11 0.1529629 463 9 0.2003767 168 9 0.1488346 504 9 0.05239434 649 9 0.0859603 686 9 0.2250188 408 10 0.0646000 362 9 0.0627750 297 9 0.1818563 406 11 0.1316667 46 3 0.108748 205 12 0.22846494 364 10 0.0637991 400 10 0.1756361 333 10 0.0940575 382 9 0.0605771 411 7 0.1246849 274 10 0.0422793 0.0311059 0.0697208 0.0623437 0.0659471 0.0561298 0.0861049 0.06976891 0.0464578 0.05860193 0.0769548 0.0321705 0.03127573 0.0710819 0.0473443 0.07217061 0.0590150 0.1215893 0.06723038 0.0502208 0.1097567 0.05155019 0.0593104 0.05272770 0.0729918 0.0600260 0.0460716 0.0639424 0.0666612 0.02798032 0.03575628 0.0923836 0.0568997 0.0592408 0.2564596 2.5197e-01 0.1258582 0.1709148 0.0340546 0.0741308 0.0397516 0.0537224 0.1013948 5 0.0639093 0.0657954 6.5314e-03 9 0.1601237 0.1455652 0.01455847 2.6436e-01 9.5209e-01 insignificant 1.00000000 1.0000e+00 insignificant 6.2694e-01 4.2319e-01 insignificant 1.0000000 1.000000 insignificant -0.01580315 0.514101 insignificant 1 insignificant 0.0640289 0.1327381 -0.06188667 9 0.1814735 0.1036966 0.0777769 4.1046e-05 3.9326e-06 weaklyHypometh 3.4205e-04 3.9326e-04 weaklyHypometh 3.5515e-02 1.2451e-03 weaklyHypometh 2.2478e-01 1.2451e-01 insignificant 1.0408e-02 7.4460e-01 insignificant 1.0000e+00 insignificant 0.0640289 0.0661111 0.00518090 10 0.1814735 0.1327880 0.0486854 2.7855e-02 5.8295e-01 weaklyHypermeth 4.7212e-01 1.0000e+00 insignificant 1.9455e-01 7.1411e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.6343e-02 2.0208e-01 insignificant 1.0000000 insignificant 0.0658399 0.1327381 -0.05691844 9 0.1649739 0.1036966 0.0612773 6.9220e-03 3.0419e-04 weaklyHypometh 4.1202e-02 2.0279e-02 weaklyHypometh 7.7603e-02 1.2718e-02 weaklyHypometh 4.4452e-01 9.7827e-01 insignificant 0.0262116 4.3899e-01 insignificant 1.0000e+00 insignificant 0.0658399 0.0661111 -2.9165e-03 9 0.1649739 0.1327880 0.03218584 2.4080e-01 2.9393e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.1718e-01 6.7910e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.05214587 0.09356090 insignificant 1.00000 insignificant 0.1327381 0.0661111 0.06523913 9 0.1036966 0.1327880 -0.02909142 2.4704e-01 1.7910e-01 insignificant 1.0000e+00 7.8900e-01 insignificant 8.0778e-02 8.4580e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.0259343 4.6964e-01 insignificant 1.00000000 insignificant chr19 43448750 43449750 53259 ENSG00000167642 0.8575109 85 6 0.6213065 219 5 0.8093556 147 5 0.7344697 129 9 0.7546480 169 5 0.5847169 164 5 0.8435921 130 5 0.8476496 95 5 0.8970022 87 5 0.8235845 73 5 0.8027343 362 5 0.7271062 53 5 0.8752381 113 5 0.8500000 47 5 0.8987879 93 5 0.7305556 33 3 0.5126130 180 4 0.46666667 47 7 0.7904444 110 5 0.9083971 177 5 0.6362082 66 5 0.6940171 49 5 0.7865385 120 6 0.7134598 106 5 0.6561765 76 5 0.8287603 244 5 0.9236111 92 5 0.7758349 70 5 0.8052973 97 5 0.72227644 326 9 0.8178106 345 9 0.6930133 280 6 0.7719744 192 5 0.9026438 86 5 0.6302941 227 5 0.6928571 53 4 0.578907 101 5 0.67459620 319 9 0.7681763 160 6 0.6316894 132 8 0.7801198 95 8 0.6726190 49 5 0.7253238 192 9 0.7060466 0.7395477 0.7856465 0.6441551 0.7735427 0.8458886 0.8362331 0.84573837 0.8799823 0.81572195 0.7716597 0.8598053 0.89455467 0.8379630 0.9024691 0.77520576 0.5117004 0.6751543 0.91278422 0.8501285 0.6228749 0.69309908 0.8219789 0.70158042 0.6299337 0.8546449 0.9083333 0.7723758 0.8005810 0.90124417 0.86498480 0.7719232 0.7614097 0.8731918 0.5272986 6.6452e-01 0.7076070 0.8302785 0.7150889 0.6438631 0.6610464 0.7507716 0.7384373 5 0.7707919 0.7835382 -3.1424e-02 5 0.6551099 0.7288068 -0.07369691 9.0046e-01 2.3550e-01 insignificant 1.00000000 1.0000e+00 insignificant 7.8202e-01 8.8687e-01 insignificant 1.0000000 1.000000 insignificant 0.01240197 0.742752 insignificant 1 insignificant 0.7707919 0.6789366 0.03496954 5 0.6551099 0.5349171 0.1201928 4.8758e-02 6.1377e-01 weaklyHypermeth 2.3669e-01 1.0000e+00 insignificant 3.2784e-01 7.9522e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.8273e-02 3.1674e-01 insignificant 1.0000e+00 insignificant 0.7710987 0.7101911 0.04568758 5 0.7146654 0.7353156 -0.0206502 1.4505e-02 1.9628e-01 weaklyHypermeth 2.7895e-01 1.0000e+00 insignificant 1.2677e-01 7.1292e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.1233e-02 2.2463e-01 insignificant 1.0000000 insignificant 0.7835382 0.6789366 0.10988034 6 0.7288068 0.5349171 0.1938897 2.6710e-03 9.9051e-01 weaklyHypermeth 1.7258e-02 1.0000e+00 weaklyHypermeth 2.4273e-01 8.7041e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0458715 4.1027e-01 insignificant 1.0000e+00 insignificant 0.7842612 0.7101911 6.9637e-02 6 0.7647590 0.7353156 0.02944340 1.2157e-02 8.0925e-01 weaklyHypermeth 2.8271e-01 1.0000e+00 insignificant 1.5357e-01 8.2824e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03883132 0.31907552 insignificant 1.00000 insignificant 0.6803279 0.7101911 -0.02976223 6 0.5835460 0.7353156 -0.15176962 7.3226e-01 4.5381e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.9262e-01 6.3793e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.0070402 9.0085e-01 insignificant 1.00000000 insignificant chr19 43452150 43453150 53261 ENSG00000167642 0.8066061 303 12 0.5627226 227 12 0.6719505 136 12 0.8467593 269 12 0.7478938 102 11 0.6834096 275 13 0.5827462 110 9 0.7355297 231 12 0.6593019 157 12 0.7833462 167 13 0.7572512 406 12 0.6064317 54 5 0.7865079 215 12 0.6651786 116 12 0.7921983 157 12 0.5392857 51 4 0.5690943 41 2 0.71072569 346 12 0.7225453 196 12 0.7434109 238 9 0.6989426 116 10 0.6015112 137 12 0.6109294 173 12 0.7205291 129 13 0.6352285 122 10 0.6722189 303 13 0.7000743 92 8 0.4295648 90 8 0.7733465 228 12 0.76356554 262 12 0.7871291 255 12 0.7141985 290 12 0.5614354 206 12 0.6986601 196 12 0.6265607 225 12 0.7724359 35 2 0.677433 168 12 0.69298568 229 12 0.7688545 174 12 0.8373970 339 12 0.7198876 297 12 0.8187171 160 12 0.7864933 291 12 0.8266168 0.5734562 0.6719434 0.8676737 0.7662657 0.7005123 0.6133163 0.74530188 0.7097051 0.78584643 0.7950897 0.6182409 0.76351687 0.6988648 0.7749625 0.64641204 0.6764755 0.8020814 0.74110135 0.7250048 0.6590406 0.64445946 0.7446597 0.71382000 0.6049905 0.6959668 0.7359526 0.6056934 0.7916953 0.73943474 0.77629217 0.7186486 0.5633927 0.6848194 0.7104206 7.4320e-01 0.6746962 0.6913096 0.7810432 0.8482561 0.7944937 0.8142218 0.7726818 3 0.7463787 0.7204007 2.6105e-02 12 0.7330628 0.6849786 0.04808418 5.1871e-02 9.9429e-01 insignificant 1.00000000 1.0000e+00 insignificant 9.0639e-02 9.7114e-01 insignificant 1.0000000 1.000000 insignificant 0.02304157 0.514433 insignificant 1 insignificant 0.7464418 0.6732767 0.07652273 12 0.7378054 0.6341260 0.1036794 2.5702e-04 9.9993e-01 weaklyHypermeth 1.8625e-03 1.0000e+00 weaklyHypermeth 2.0173e-01 9.6421e-01 insignificant 9.8855e-01 1.0000e+00 insignificant 2.7060e-02 4.6227e-01 insignificant 1.0000e+00 insignificant 0.7464418 0.8041237 -0.05079796 12 0.7378054 0.7421823 -0.0043769 9.3757e-01 4.6576e-02 weaklyHypometh 1.0000e+00 5.9249e-01 insignificant 9.4068e-01 1.6626e-02 weaklyHypometh 1.0000e+00 4.1565e-01 insignificant -8.7625e-02 9.2740e-03 weaklyHypometh 0.2701604 insignificant 0.7202191 0.6732767 0.05103890 12 0.6767628 0.6341260 0.0426368 3.4383e-02 9.9512e-01 weaklyHypermeth 1.7543e-01 1.0000e+00 insignificant 6.4494e-01 7.8293e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0040181 9.2282e-01 insignificant 1.0000e+00 insignificant 0.7202191 0.8041237 -7.5298e-02 12 0.6767628 0.7421823 -0.06541948 9.9739e-01 2.0467e-05 weaklyHypometh 1.0000e+00 2.2741e-03 weaklyHypometh 9.9314e-01 6.2294e-05 weaklyHypometh 1.0000e+00 1.0382e-02 weaklyHypometh -0.11066670 0.00661720 weaklyHypometh 0.50902 insignificant 0.6732767 0.8041237 -0.12487585 12 0.6341260 0.7421823 -0.10805630 9.9915e-01 1.3934e-06 weaklyHypometh 1.0000e+00 2.2843e-05 weaklyHypometh 9.9822e-01 1.1380e-03 weaklyHypometh 1.0000000 1.4974e-02 weaklyHypometh -0.1146848 1.1271e-02 weaklyHypometh 0.15875159 insignificant chr19 43599850 43600850 53264 FAM98C ENSG00000130244 0.0026738 320 9 0.0034843 259 7 0.0597529 331 7 0.0040863 375 11 0.0514801 252 7 0.0173244 369 11 0.0056170 358 7 0.0212585 216 7 0.0093537 332 7 0.0061956 479 7 0.0087299 225 7 0.0226450 373 7 0.0139194 312 7 0.0083333 120 2 0.0033058 414 7 0.0083333 273 7 0.0100000 239 5 0.07745542 428 9 0.0000000 303 9 0.0020674 345 7 0.0217014 134 6 0.0178571 149 7 0.0676056 295 8 0.0363543 124 7 0.1142857 72 4 0.0000000 360 11 0.0277635 419 7 0.0119048 135 6 0.0021008 237 4 0.00089286 405 7 0.0010661 371 10 0.0170960 382 11 0.0334134 304 7 0.0342857 167 7 0.0000000 137 7 0.0064935 201 11 0.140625 119 5 0.00534884 409 11 0.0069058 355 11 0.0079849 269 9 0.0000000 316 9 0.0031348 455 9 0.0061224 331 9 0.0020909 0.0031788 0.0258631 0.0079168 0.0134281 0.0236019 0.0077571 0.01723652 0.0068269 0.00313578 0.0158814 0.0082636 0.01545753 0.0100188 0.0024036 0.00078989 0.0056416 0.0050303 0.00053946 0.0093949 0.0189244 0.01015572 0.0010680 0.02782449 0.1042654 0.0000000 0.0306481 0.0064101 0.0051227 0.00094787 0.00194525 0.0159262 0.0124623 0.0163981 0.0000000 1.1848e-02 0.0088863 0.0054888 0.0054970 0.0085539 0.0000000 0.0024514 0.0298578 5 0.0102832 0.0142904 -3.3459e-03 7 0.0749147 0.0758656 -0.00095084 6.9795e-01 9.9072e-01 insignificant 1.00000000 1.0000e+00 insignificant 3.3605e-01 9.9880e-01 insignificant 1.0000000 1.000000 insignificant -0.00975155 0.380755 insignificant 1 insignificant 0.0102848 0.0127150 -0.00149763 11 0.0749147 0.0769313 -0.0020166 8.0066e-01 8.0091e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.9261e-01 9.9980e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -1.9894e-02 4.0703e-01 insignificant 1.0000e+00 insignificant 0.0102864 0.0057971 0.00361413 9 0.0802658 0.0038026 0.0764632 2.8840e-01 9.9948e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.2296e-01 9.9994e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.1971e-02 2.4709e-02 weaklyHypermeth 0.4575774 insignificant 0.0139701 0.0119760 0.00274514 7 0.0098560 0.0109978 -0.0011419 9.7670e-01 7.6540e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8429e-01 9.9006e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0101420 6.8182e-01 insignificant 1.0000e+00 insignificant 0.0139701 0.0057971 9.9974e-03 5 0.0098560 0.0038026 0.00605337 9.7352e-01 9.9962e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.5914e-01 9.9996e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02172277 0.04838558 weaklyHypermeth 0.93049 insignificant 0.0119760 0.0057971 0.00385582 9 0.0109978 0.0038026 0.00719524 8.4411e-01 9.9967e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8961e-01 9.9984e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.0318648 2.0136e-01 insignificant 0.98821309 insignificant chr19 43689050 43690050 53266 RYR1 ENSG00000196218 0.2270244 566 10 0.1321473 454 12 0.3107649 386 14 0.4392155 260 8 0.1832307 368 15 0.4123955 427 12 0.2337299 403 14 0.2513896 301 11 0.2044844 287 12 0.2597898 262 12 0.4491724 274 7 0.2710216 190 12 0.1275548 307 11 0.5240336 150 9 0.3589918 333 12 0.2268547 342 12 0.1156863 915 5 0.45127778 486 8 0.0928368 566 10 0.4967110 336 13 0.1546195 168 10 0.2930729 248 7 0.1642505 305 13 0.2265487 194 11 0.3253807 913 7 0.1991679 436 12 0.1282732 456 9 0.2592491 191 12 0.3586992 486 10 0.38362618 327 11 0.3049572 366 12 0.2919657 508 12 0.3027472 329 11 0.2722192 415 10 0.0445773 461 12 0.2807879 251 6 0.264685 282 13 0.23364570 514 12 0.4045383 405 11 0.3097499 483 10 0.2365217 288 7 0.4255512 445 9 0.2987179 190 8 0.2374120 0.1273793 0.2193730 0.5286129 0.2195779 0.3482946 0.2466881 0.24047112 0.1910042 0.33042913 0.4427118 0.2999585 0.10319826 0.5092329 0.3932164 0.17041952 0.2775291 0.3933457 0.05658478 0.3666750 0.2668381 0.23187575 0.1423785 0.19526599 0.2123358 0.0987593 0.1232257 0.2034710 0.2120309 0.17455272 0.12216286 0.2794653 0.2527629 0.1891613 0.0096599 2.0661e-01 0.2109960 0.2066576 0.3202735 0.2849032 0.3672922 0.3771225 0.3300081 7 0.2664474 0.1750600 7.8887e-02 10 0.3024170 0.2699513 0.03246564 6.0593e-05 9.8994e-01 weaklyHypermeth 0.01514835 1.0000e+00 weaklyHypermeth 6.9237e-04 9.9980e-01 weaklyHypermeth 0.1384731 1.000000 insignificant 0.03093141 0.427811 insignificant 1 insignificant 0.2660695 0.1802842 0.08390247 10 0.2781591 0.2137256 0.0644335 3.2483e-03 9.9753e-01 weaklyHypermeth 1.9451e-02 1.0000e+00 weaklyHypermeth 9.1043e-02 9.9591e-01 insignificant 5.1978e-01 1.0000e+00 insignificant 5.5305e-02 2.8274e-01 insignificant 1.0000e+00 insignificant 0.2660865 0.2832689 -0.05905097 9 0.2608170 0.3109679 -0.0501508 9.1724e-01 1.0311e-03 weaklyHypometh 1.0000e+00 4.6866e-02 weaklyHypometh 8.2123e-01 7.7923e-02 insignificant 1.0000e+00 8.9567e-01 insignificant -4.6600e-02 3.3587e-01 insignificant 1.0000000 insignificant 0.1744262 0.1802842 0.01184262 10 0.2450238 0.2137256 0.0312982 5.5011e-01 8.3086e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7692e-01 9.1075e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0243738 6.0613e-01 insignificant 1.0000e+00 insignificant 0.1742657 0.2835821 -1.4235e-01 9 0.2408875 0.3455199 -0.10463234 9.8544e-01 3.2283e-16 weaklyHypometh 1.0000e+00 3.2283e-13 weaklyHypometh 9.7739e-01 6.2823e-07 weaklyHypometh 1.0000e+00 2.0941e-04 weaklyHypometh -0.07753157 0.10593554 insignificant 1.00000 insignificant 0.1798753 0.2835821 -0.13557728 9 0.1937909 0.3455199 -0.15172892 9.8502e-01 2.6465e-05 weaklyHypometh 1.0000e+00 3.1886e-04 weaklyHypometh 9.9482e-01 5.5288e-03 weaklyHypometh 1.0000000 5.4741e-02 weaklyHypometh -0.1019054 8.3437e-02 insignificant 0.56376473 insignificant chr19 43910350 43911350 53284 ACTN4 ENSG00000130402 0.9287845 609 15 0.7688530 180 9 0.7941455 166 9 0.8511055 655 15 0.9330739 91 9 0.8832607 457 13 0.8708333 108 9 0.8306802 134 9 0.8120960 170 9 0.7503133 118 9 0.9414735 290 11 0.7618182 73 8 0.6681849 173 9 0.7750000 21 2 0.7016835 127 9 0.7152525 76 7 0.5453920 499 9 0.74075145 664 14 0.8239603 253 11 0.8550803 305 11 0.8493022 93 9 0.7105067 107 8 0.7874834 302 13 0.8447076 81 8 0.9181769 257 9 0.9371589 235 11 0.8412499 168 9 0.9372294 74 8 0.8071603 128 8 0.88158014 220 11 0.7181088 276 11 0.8874509 465 13 0.7640378 163 9 0.7966205 156 9 0.6513399 344 5 0.8540814 216 13 0.612684 125 9 0.73744768 291 13 0.8082403 511 15 0.8809198 486 13 0.9269828 432 15 0.7666910 662 15 0.8710136 617 13 0.9078967 0.8509075 0.7767797 0.8941649 0.8846792 0.9460876 0.8719014 0.87657092 0.9126432 0.88382815 0.9264369 0.8295086 0.95446696 NA 0.9325397 0.88112745 0.8548759 0.8513278 0.85480829 0.9030840 0.9029763 0.64939574 0.8874931 0.91265449 0.9153650 0.9215637 0.8984067 0.9187821 0.8789363 0.93633063 0.86475861 0.9425596 0.7445451 0.7993326 0.7831617 9.6571e-01 0.7920701 0.7268792 0.8744710 0.8725057 0.9164872 0.7548291 0.8425375 6 0.8768158 0.8935993 -1.0181e-02 11 0.7847615 0.7195417 0.06521988 9.0026e-01 7.2178e-01 insignificant 1.00000000 1.0000e+00 insignificant 9.8450e-01 2.7508e-01 insignificant 1.0000000 1.000000 insignificant -0.04575579 0.152217 insignificant 1 insignificant 0.8781056 0.8509653 0.01932691 11 0.8694877 0.6483750 0.2211127 9.3433e-08 9.9921e-01 weaklyHypermeth 9.8350e-07 1.0000e+00 weaklyHypermeth 4.6076e-02 9.6273e-01 weaklyHypermeth 2.8442e-01 1.0000e+00 insignificant 6.1552e-02 1.8540e-01 insignificant 1.0000e+00 insignificant 0.8777972 0.8700148 0.02361318 13 0.7504890 0.8030235 -0.0525345 7.8752e-02 7.1282e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.6106e-01 3.5848e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -5.3182e-02 1.6931e-01 insignificant 1.0000000 insignificant 0.8954602 0.8508501 0.04819512 11 0.8331535 0.6298684 0.2032851 8.7293e-06 9.8190e-01 weaklyHypermeth 8.3136e-05 1.0000e+00 weaklyHypermeth 2.5258e-02 9.9543e-01 weaklyHypermeth 1.7300e-01 1.0000e+00 insignificant 0.1073077 3.4827e-02 weaklyHypermeth 2.7208e-01 insignificant 0.8952858 0.8699668 5.2146e-02 11 0.7841127 0.7914366 -0.00732388 2.0284e-02 9.4780e-01 weaklyHypermeth 4.2741e-01 1.0000e+00 insignificant 1.3211e-01 9.9326e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00742657 0.84062247 insignificant 1.00000 insignificant 0.8539239 0.8702403 0.03686188 11 0.6978333 0.8302948 -0.13246155 3.4401e-01 6.1291e-08 inconclusive 1.0000e+00 1.2769e-06 inconclusive 5.7311e-01 1.0249e-01 insignificant 1.0000000 5.5700e-01 insignificant -0.1147342 3.6185e-02 weaklyHypometh 0.31194064 insignificant chr19 43918750 43919750 53285 ACTN4 ENSG00000130402 0.0994145 701 18 0.0744427 429 17 0.1322441 583 22 0.0758615 887 18 0.0937098 284 19 0.1490638 961 21 0.0871817 475 22 0.0762099 435 22 0.1012853 604 20 0.0989690 553 22 0.1126483 475 22 0.0929686 464 20 0.1156526 492 18 0.1511844 128 6 0.0924116 626 18 0.0750771 352 16 0.1042769 388 19 0.21563891 980 18 0.0618823 326 16 0.0697501 767 22 0.0747352 188 15 0.0472626 658 20 0.1168042 449 18 0.0403531 285 19 0.1503763 525 18 0.1156144 811 22 0.0658256 383 21 0.0601901 247 18 0.0699052 376 17 0.10443267 715 19 0.0708074 686 22 0.0998843 942 22 0.0265917 333 21 0.0505251 434 17 0.0666667 197 8 0.0315174 285 16 0.077097 236 14 0.05994701 578 22 0.0630678 896 22 0.0565421 940 22 0.0832998 792 17 0.0652637 866 22 0.0737646 884 18 0.0659508 0.0688555 0.1302188 0.0715411 0.0781809 0.1069351 0.0743834 0.04950123 0.0798246 0.07051037 0.1292224 0.0833061 0.09000259 0.1112735 0.0732563 0.10864882 0.0909714 0.0740787 0.05239114 0.0570127 0.0937312 0.03093079 0.0800121 0.04399719 0.0738309 0.0915184 0.0481277 0.0938565 0.0659716 0.08164531 0.05547861 0.0925817 0.0198429 0.0491213 0.0430376 3.4225e-02 0.0758572 0.0466782 0.0608829 0.0418729 0.0538298 0.0632155 0.0723561 13 0.0865579 0.0726257 1.0171e-02 22 0.1413539 0.0959047 0.04544929 1.5250e-02 9.9945e-01 weaklyHypermeth 1.00000000 1.0000e+00 insignificant 2.9364e-02 9.9998e-01 weaklyHypermeth 1.0000000 1.000000 insignificant 0.01931107 0.132089 insignificant 1 insignificant 0.0864662 0.0484731 0.04216119 17 0.1275599 0.0664979 0.0610620 7.8571e-09 1.0000e+00 weaklyHypermeth 9.2437e-08 1.0000e+00 weaklyHypermeth 2.8530e-08 1.0000e+00 weaklyHypermeth 7.7107e-07 1.0000e+00 weaklyHypermeth 5.1936e-02 3.4858e-04 weaklyHypermeth 7.2620e-03 weaklyHypermeth 0.0862940 0.0539059 0.02011124 18 0.1137633 0.0646498 0.0491135 4.1083e-05 9.9977e-01 weaklyHypermeth 1.7862e-03 1.0000e+00 weaklyHypermeth 9.8242e-04 9.9077e-01 weaklyHypermeth 4.4655e-02 1.0000e+00 weaklyHypermeth 3.5606e-02 9.0039e-04 weaklyHypermeth 0.0643133 weaklyHypermeth 0.0725587 0.0485201 0.03540748 17 0.0955770 0.0691578 0.0264192 4.0259e-05 9.2420e-01 weaklyHypermeth 3.6935e-04 1.0000e+00 weaklyHypermeth 4.4903e-04 9.9760e-01 weaklyHypermeth 4.9892e-03 1.0000e+00 weaklyHypermeth 0.0326251 1.9179e-02 weaklyHypermeth 1.8620e-01 insignificant 0.0724568 0.0539059 1.4356e-02 18 0.0930185 0.0646498 0.02836871 4.5905e-02 9.9172e-01 weaklyHypermeth 7.6508e-01 1.0000e+00 insignificant 2.4725e-01 7.6315e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01629500 0.14256852 insignificant 1.00000 insignificant 0.0486618 0.0539059 -0.01766109 17 0.0751715 0.0646498 0.01052175 9.7534e-01 8.6107e-03 weaklyHypometh 1.0000e+00 5.6649e-02 weaklyHypometh 9.9980e-01 1.1340e-02 weaklyHypometh 1.0000000 9.7195e-02 weaklyHypometh -0.0163301 1.1985e-01 insignificant 0.73524626 insignificant chr19 44315850 44316850 53292 PAK4 ENSG00000130669 0.3966777 359 10 0.3113482 299 12 0.4767172 344 12 0.2479599 391 10 0.3898185 335 11 0.5227403 457 11 0.5265579 277 11 0.4018080 374 11 0.3610320 430 12 0.3729652 368 11 0.5095496 395 11 0.4446531 252 11 0.2559278 423 12 0.3675136 249 6 0.3625242 449 11 0.3701176 179 9 0.3957508 87 11 0.43383075 413 9 0.3144539 307 10 0.2484525 438 10 0.3937570 129 9 0.1890676 268 10 0.3264476 291 12 0.3252463 227 12 0.3796261 138 8 0.2791118 485 12 0.3246102 288 12 0.2806003 240 9 0.4339502 215 11 0.22521934 560 12 0.3447745 454 12 0.5337472 392 10 0.4942710 276 12 0.5340199 186 10 0.7113152 388 10 0.4555556 72 5 0.608340 319 10 0.48707583 277 12 0.3562955 385 8 0.2786556 397 11 0.1851412 312 7 0.2487577 352 8 0.3637784 451 9 0.3551102 0.2654311 0.4391082 0.2662373 0.3379972 0.5315497 0.4961832 0.35805897 0.3340480 0.33880770 0.4280825 0.3474173 0.20361836 0.3410386 0.2924084 0.42381394 0.3476497 0.3548432 0.26489327 0.2188660 0.3200224 0.14973710 0.2978878 0.30511889 0.2750609 0.2256961 0.2801436 0.2826427 0.3671450 0.16982708 0.26825054 0.4285299 0.4437937 0.5739013 0.6568372 4.4251e-01 0.6116891 0.3750796 0.2469469 0.2161871 0.2174930 0.2334791 0.2520225 7 0.3466159 0.2780038 6.4361e-02 11 0.3838323 0.3198805 0.06395187 2.3877e-05 9.9980e-01 weaklyHypermeth 0.00795912 1.0000e+00 weaklyHypermeth 1.2875e-03 9.6601e-01 weaklyHypermeth 0.2145782 1.000000 insignificant 0.04917341 0.147802 insignificant 1 insignificant 0.3466159 0.5586298 -0.20324716 11 0.3838323 0.5836577 -0.1998253 9.9940e-01 8.2705e-18 hypomethylated 1.0000e+00 1.3784e-15 hypomethylated 9.8484e-01 8.8564e-08 hypomethylated 1.0000e+00 4.4282e-05 hypomethylated -1.6291e-01 6.2292e-03 weaklyHypometh 7.8851e-02 weaklyHypometh 0.3466159 0.2725356 0.09824813 8 0.3838323 0.2869856 0.0968467 3.0141e-06 9.9745e-01 weaklyHypermeth 1.8838e-04 1.0000e+00 weaklyHypermeth 3.6119e-06 9.9268e-01 weaklyHypermeth 4.5149e-04 1.0000e+00 weaklyHypermeth 9.8994e-02 3.8176e-02 weaklyHypermeth 0.5376914 insignificant 0.2780038 0.5586298 -0.27235973 12 0.3198805 0.5836577 -0.2637772 9.9996e-01 1.1215e-20 hypomethylated 1.0000e+00 1.1215e-17 hypomethylated 9.6837e-01 3.7888e-10 hypomethylated 1.0000e+00 1.2629e-07 hypomethylated -0.2120831 1.2260e-03 weaklyHypometh 2.0780e-02 weaklyHypometh 0.2780038 0.2725356 3.4153e-02 8 0.3198805 0.2869856 0.03289484 3.5579e-02 8.2451e-01 weaklyHypermeth 6.4526e-01 1.0000e+00 insignificant 3.1906e-03 9.0946e-01 weaklyHypermeth 1.5953e-01 1.0000e+00 insignificant 0.04982084 0.27510827 insignificant 1.00000 insignificant 0.5586298 0.2725356 0.30351649 8 0.5836577 0.2869856 0.29667203 3.9287e-12 1.0000e+00 hypermethylated 3.9287e-09 1.0000e+00 hypermethylated 8.1587e-06 1.0000e+00 hypermethylated 0.0081587 1.0000e+00 hypermethylated 0.2619039 6.6035e-04 hypermethylated 0.02641400 hypermethylated chr19 44318450 44319450 53293 PAK4 ENSG00000130669 0.8630052 389 6 0.8181656 189 6 0.6514321 225 6 0.7783998 341 6 0.8667865 176 8 0.8769262 455 6 0.8784192 218 6 0.8339066 227 6 0.7089572 213 6 0.5706937 168 6 0.7606603 354 8 0.7521930 80 5 0.5970211 184 6 0.8781597 133 6 0.7669541 173 6 0.7237224 68 3 0.6321591 143 5 0.81722036 666 6 0.5182492 330 6 0.8257851 409 6 0.7567234 121 6 0.8442342 95 6 0.8342416 185 6 0.7973564 141 6 0.7662028 223 5 0.8983227 243 6 0.7419601 162 6 0.8291035 150 8 0.7513117 315 6 0.81353301 243 6 0.7300209 262 6 0.8526873 379 8 0.6750917 235 6 0.7804533 149 6 0.5483834 166 5 0.8000000 31 4 0.638155 260 6 0.71009279 281 6 0.9274275 329 6 0.8286152 358 6 0.8316669 280 6 0.8208549 456 5 0.8258024 246 6 0.8617198 0.7693298 0.7042479 0.8304216 0.8362102 0.8907598 0.8530174 0.78239575 0.7423624 0.80628644 0.7956437 0.6890672 0.66557124 0.8875362 0.7968263 0.81225715 0.7235739 0.8370674 0.54695706 0.7966888 0.8312209 0.80138897 0.8649452 0.84290940 0.8553541 0.8521229 0.7828443 0.8898884 0.8027764 0.86413517 0.79045170 0.8751059 0.7027215 0.7578638 0.4536341 7.4974e-01 0.7182838 0.7974521 0.9135087 0.8344848 0.8419289 0.8740128 0.8677278 5 0.7822534 0.8173879 -3.5930e-02 6 0.7366371 0.7530420 -0.01640493 9.5249e-01 1.1765e-01 insignificant 1.00000000 1.0000e+00 insignificant 9.9674e-01 1.1003e-01 insignificant 1.0000000 1.000000 insignificant -0.04536731 0.128966 insignificant 1 insignificant 0.7823632 0.7308378 0.04681621 6 0.7629301 0.5973218 0.1656082 1.8292e-06 3.9445e-01 weaklyHypermeth 1.6937e-05 1.0000e+00 weaklyHypermeth 6.8385e-02 2.7414e-02 inconclusive 4.0705e-01 1.0000e+00 insignificant 6.3911e-02 1.9122e-01 insignificant 1.0000e+00 insignificant 0.7824309 0.8526064 -0.07651280 6 0.7749630 0.8522042 -0.0772412 9.9929e-01 8.2787e-04 weaklyHypometh 1.0000e+00 4.1394e-02 weaklyHypometh 9.9827e-01 6.2878e-04 weaklyHypometh 1.0000e+00 4.8368e-02 weaklyHypometh -9.0933e-02 1.1227e-02 weaklyHypometh 0.2878691 insignificant 0.8176400 0.7308378 0.08472926 6 0.7811578 0.5973218 0.1838359 3.7858e-05 7.6431e-01 weaklyHypermeth 3.5054e-04 1.0000e+00 weaklyHypermeth 9.4382e-02 4.9038e-01 insignificant 5.2490e-01 1.0000e+00 insignificant 0.1092787 3.3996e-02 weaklyHypermeth 2.7208e-01 insignificant 0.8178926 0.8526064 -4.2721e-02 6 0.8163025 0.8522042 -0.03590172 9.3897e-01 3.1770e-02 weaklyHypometh 1.0000e+00 5.6732e-01 insignificant 9.2956e-01 1.1738e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04556525 0.10567526 insignificant 1.00000 insignificant 0.7314897 0.8526064 -0.13653378 6 0.6719871 0.8522042 -0.18021714 7.4620e-01 4.0598e-04 weaklyHypometh 1.0000e+00 3.6249e-03 weaklyHypometh 4.3619e-01 8.6099e-02 insignificant 1.0000000 4.9768e-01 insignificant -0.1548439 7.9719e-03 weaklyHypometh 0.13511739 insignificant chr19 44610250 44611250 53307 PLEKHG2 ENSG00000090924 0.2194947 456 15 0.2523060 789 15 0.1698915 572 15 0.2274602 533 15 0.1349614 448 15 0.3536625 749 17 0.1270534 555 15 0.2418457 467 15 0.2254005 568 12 0.2595910 802 13 0.2691914 598 15 0.1407381 632 15 0.2179238 484 11 0.2939019 358 9 0.1859472 725 12 0.1565606 667 11 0.1127151 406 13 0.29629425 551 11 0.1754426 429 12 0.2801746 592 17 0.1660831 185 12 0.0957407 232 6 0.2128260 531 15 0.1787542 281 14 0.1831474 283 8 0.1335741 694 15 0.2130461 326 13 0.2192233 223 12 0.2093179 434 14 0.17619525 798 15 0.1928013 749 15 0.3329941 663 12 0.1497248 460 15 0.1350734 301 13 0.2312500 326 11 0.0809524 148 11 0.232941 440 13 0.18372509 484 15 0.2359024 622 15 0.2296723 550 15 0.2560425 511 15 0.2265044 410 15 0.3184657 445 15 0.0947291 0.0961487 0.0805778 0.0841024 0.0774439 0.1380558 0.0544120 0.09318081 0.0656170 0.09712538 0.1024487 0.0871338 0.08887498 0.1104360 0.0736884 0.08059453 0.0584129 0.0967654 0.08834865 0.1146217 0.0617515 0.04877590 0.1224296 0.08669511 0.0751971 0.0620581 0.0820657 0.0691892 0.1122242 0.07401345 0.08110065 0.1369343 0.0565659 0.0520069 0.1371674 4.5150e-02 0.0823274 0.0422897 0.1118265 0.1065867 0.1047876 0.0901040 0.1049547 7 0.1160706 0.1279867 5.5228e-03 15 0.2789991 0.1933236 0.08567551 2.0906e-03 9.2429e-01 weaklyHypermeth 0.23229030 1.0000e+00 insignificant 1.3171e-02 9.2192e-01 weaklyHypermeth 0.9407885 1.000000 insignificant 0.02421920 0.281351 insignificant 1 insignificant 0.1160706 0.0824456 0.08403297 15 0.2789991 0.1905002 0.0884989 9.0810e-11 9.9994e-01 weaklyHypermeth 1.2108e-09 1.0000e+00 weaklyHypermeth 4.2884e-07 9.8777e-01 weaklyHypermeth 8.4087e-06 1.0000e+00 weaklyHypermeth 4.8083e-02 1.2245e-01 insignificant 7.3763e-01 insignificant 0.1159930 0.2273444 -0.01650432 15 0.2365873 0.2541562 -0.0175689 4.6784e-01 7.5432e-02 insignificant 1.0000e+00 7.6971e-01 insignificant 4.0253e-01 1.1670e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -3.6290e-02 1.3552e-01 insignificant 1.0000000 insignificant 0.1279867 0.0824456 0.07943975 15 0.1933236 0.1905002 0.0028234 1.0415e-07 8.8481e-01 weaklyHypermeth 1.2253e-06 1.0000e+00 weaklyHypermeth 6.0771e-04 8.4844e-01 weaklyHypermeth 6.4650e-03 1.0000e+00 weaklyHypermeth 0.0238641 4.3307e-01 insignificant 1.0000e+00 insignificant 0.1279674 0.2273444 -2.2762e-02 15 0.1962922 0.2541562 -0.05786402 7.5392e-01 2.4020e-03 weaklyHypometh 1.0000e+00 8.5787e-02 weaklyHypometh 8.3650e-01 1.2679e-02 weaklyHypometh 1.0000e+00 4.0632e-01 insignificant -0.06050883 0.02634018 weaklyHypometh 0.79819 insignificant 0.0820584 0.2273444 -0.12738030 15 0.1722943 0.2541562 -0.08186187 9.9998e-01 4.3591e-08 weaklyHypometh 1.0000e+00 9.4763e-07 weaklyHypometh 9.9989e-01 4.2773e-05 weaklyHypometh 1.0000000 9.9471e-04 weaklyHypometh -0.0843729 1.9872e-02 weaklyHypometh 0.22079930 insignificant chr19 45202850 45203850 53312 ZNF546 ENSG00000187187 0.6269292 128 5 0.7039630 71 5 0.5892974 68 5 0.6496732 61 5 0.5241758 36 2 0.7316667 86 5 0.7143162 40 4 0.6510204 91 5 0.5142857 17 2 0.6000000 22 2 0.7112008 138 5 0.5000000 12 0 0.6611111 52 5 0.7285714 29 5 0.6133333 35 5 0.4066667 17 2 NA 0 0 0.54557267 103 5 0.7250000 56 5 0.5046769 49 5 0.8442460 25 2 0.8888889 9 0 0.5120290 73 5 0.5578704 47 5 0.7242424 31 2 0.6967116 93 5 0.8000000 35 5 0.6071429 13 2 0.4891304 62 2 0.61070393 87 5 0.6265550 76 5 0.5752508 87 5 0.7110120 89 5 0.7096970 55 5 0.6261905 46 5 0.3000000 7 0 0.655932 65 5 0.62972203 74 5 0.6336580 67 5 0.7006880 91 5 0.6503759 108 5 0.7000000 48 5 0.7046784 63 5 0.7000624 0.6723584 0.6014874 0.6975202 0.6841467 0.7977941 0.6212858 0.73963585 0.6659664 0.68382353 0.7412735 0.5441176 0.59436275 0.6529412 0.6058824 0.51470588 NA 0.5963267 0.70404412 0.7133666 0.8426996 0.77246368 0.7103581 0.74938725 0.7259358 0.6378309 0.7720588 0.6192600 0.6598465 0.65027859 0.67548551 0.7044068 0.6931481 0.7279857 0.5689776 2.7206e-01 0.6319647 0.6643732 0.6658629 0.7355976 0.7472910 0.7745098 0.7520640 0 0.6705671 0.6880878 -1.1837e-02 5 0.6278294 0.5748482 0.05298121 5.4322e-01 6.1608e-01 insignificant 1.00000000 1.0000e+00 insignificant 7.8185e-01 3.1470e-01 insignificant 1.0000000 1.000000 insignificant -0.04519794 0.311958 lowCoverage 1 lowCoverage 0.6724295 0.6666667 0.01146953 5 0.6618183 0.6641554 -0.0023371 1.9383e-01 4.7369e-01 insignificant 8.2132e-01 1.0000e+00 insignificant 1.2316e-01 7.9565e-01 insignificant 6.7302e-01 1.0000e+00 insignificant 1.0441e-02 8.8043e-01 lowCoverage 1.0000e+00 lowCoverage 0.6705671 0.7161804 -0.03933857 5 0.6278294 0.6375802 -0.0097508 8.4964e-01 2.2434e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4776e-01 1.9743e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -6.2014e-02 2.9705e-02 lowCoverage 0.4950916 lowCoverage 0.6914557 0.6666667 0.02488095 5 0.6714541 0.6641554 0.0072988 6.2328e-02 6.2529e-01 insignificant 2.9680e-01 1.0000e+00 insignificant 1.7920e-02 8.9023e-01 weaklyHypermeth 1.2863e-01 1.0000e+00 insignificant 0.0556388 4.6798e-01 lowCoverage 1.0000e+00 lowCoverage 0.6880878 0.7161804 -2.4894e-02 5 0.5748482 0.6375802 -0.06273202 9.7036e-01 2.9845e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7259e-01 3.7872e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01681578 0.68385288 lowCoverage 1.00000 lowCoverage 0.6666667 0.7173333 -0.04577653 5 0.6641554 0.6926123 -0.02845692 3.5970e-01 4.3244e-02 weaklyHypometh 1.0000e+00 2.2641e-01 insignificant 6.9932e-01 2.2697e-02 weaklyHypometh 1.0000000 1.7195e-01 insignificant -0.0724545 3.0877e-01 lowCoverage 1.00000000 lowCoverage chr19 45472050 45473050 53316 AKT2 ENSG00000105221 0.8386274 215 4 0.7989117 101 5 0.6305538 97 9 0.8786240 249 6 0.8193122 52 6 0.8382839 197 6 0.8273148 54 3 0.7647305 124 7 0.8395401 100 6 0.8194003 144 9 0.7085612 116 7 0.7276335 46 4 0.8782096 187 7 0.7305556 69 4 0.5864475 144 6 0.4444444 13 0 0.7416667 25 2 0.83355451 291 4 0.8737817 85 4 0.8633086 175 7 0.7885609 94 9 0.8181855 96 6 0.8334852 150 6 0.6461471 84 7 0.6770833 69 4 0.8107480 97 6 0.8012150 108 9 0.5803030 44 5 0.8947950 103 4 0.88009090 131 6 0.7607430 127 6 0.8247230 260 9 0.5756179 175 9 0.0623497 86 4 0.4722222 104 4 0.4580366 72 4 0.496248 56 5 0.83836467 105 6 0.8638201 178 6 0.8134033 177 4 0.9059497 240 4 0.9214208 207 4 0.6899019 286 6 0.7676186 0.6724308 0.6196523 0.8589930 0.8417659 0.8260583 0.6643229 0.74050727 0.7797047 0.84440038 0.7761478 0.6445359 0.84860336 0.7814867 0.7410762 0.59603578 0.7661616 0.8004608 0.84644969 0.8549896 0.7373229 0.76972147 0.8312549 0.74087544 0.8083132 0.7586527 0.8173600 0.6402462 0.7982913 0.87880522 0.74612977 0.7708121 0.4901887 0.1104941 0.4545263 4.3949e-01 0.4782197 0.8338502 0.7870095 0.8026893 0.8182893 0.8472495 0.8217802 4 0.7966989 0.7953045 6.0664e-03 6 0.7920660 0.7633657 0.02870032 5.0682e-01 7.3441e-01 insignificant 1.00000000 1.0000e+00 insignificant 3.4592e-01 8.4035e-01 insignificant 1.0000000 1.000000 insignificant -0.00416691 0.911497 insignificant 1 insignificant 0.7966989 0.5083612 0.29763391 6 0.7920660 0.5141569 0.2779091 5.7173e-13 9.9923e-01 hypermethylated 1.0030e-11 1.0000e+00 hypermethylated 8.1156e-06 9.9894e-01 hypermethylated 1.2113e-04 1.0000e+00 hypermethylated 2.8837e-01 3.5982e-02 weaklyHypermeth 2.9985e-01 insignificant 0.7969380 0.8033088 -0.01226373 4 0.8212726 0.8093875 0.0118851 7.9602e-01 8.0275e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.7214e-01 2.7687e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -6.6726e-02 2.1114e-01 lowCoverage 1.0000000 lowCoverage 0.7953045 0.5083612 0.28823748 6 0.7633657 0.5141569 0.2492087 4.1954e-10 9.5725e-01 hypermethylated 6.6594e-09 1.0000e+00 hypermethylated 8.0031e-06 9.8301e-01 hypermethylated 1.5390e-04 1.0000e+00 hypermethylated 0.2925335 3.4126e-02 weaklyHypermeth 2.7208e-01 insignificant 0.7957384 0.8033088 -2.0783e-02 4 0.7897022 0.8093875 -0.01968526 7.7751e-01 5.4304e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.9938e-01 7.0421e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.06255913 0.24697281 lowCoverage 1.00000 lowCoverage 0.5092127 0.8033088 -0.31843870 4 0.5655726 0.8093875 -0.24381488 9.9021e-01 4.9526e-05 lowCoverage 1.0000e+00 5.7588e-04 lowCoverage 9.9901e-01 3.0338e-04 lowCoverage 1.0000000 5.2306e-03 lowCoverage -0.3550926 1.5964e-02 lowCoverage 0.19467805 lowCoverage chr19 45562750 45563750 53318 ENSG00000205039 0.1262211 225 8 0.1364761 192 8 0.0478468 245 8 0.1272727 48 7 0.0089169 142 10 0.1212910 331 9 0.0673384 459 14 0.0946970 197 9 0.0130613 325 10 0.0740079 236 10 0.0988276 255 10 0.0108086 337 10 0.0779060 350 14 0.0000000 70 6 0.0092774 535 14 0.0126017 353 10 0.0202059 377 10 0.01515152 85 8 0.0381084 181 10 0.1717818 219 8 0.0113095 139 10 0.0092593 102 8 0.0286550 210 8 0.0152575 99 8 0.0345679 52 5 0.0714286 320 8 0.0175253 195 9 0.0796930 56 6 0.0375784 184 10 0.16063381 312 8 0.0020790 410 13 0.1102765 448 13 0.1610238 186 8 0.1955928 221 8 0.2167707 188 8 0.0000000 93 8 0.272986 99 10 0.01163708 240 13 0.1111111 176 8 0.0000000 212 8 0.0312500 70 8 0.0070034 237 8 0.1903595 159 8 0.0194584 0.0198340 0.0620437 0.0438040 0.0107690 0.0138934 0.0206120 0.00492315 0.0200418 0.00974338 0.0152796 0.0138160 0.01155399 NA 0.0068603 0.01540078 0.0276995 0.0172911 0.02373155 0.0080080 0.0176822 0.00984630 0.0304717 0.01983031 0.0540506 0.0000000 0.0097695 0.0523597 0.0100407 0.01318171 0.00319340 0.0267371 0.0920127 0.2584131 0.3037446 0.0000e+00 0.3398909 0.0180226 0.0000000 0.0000000 0.0298991 0.0083040 0.0337534 8 0.0224719 0.0189949 3.5624e-03 8 0.0483121 0.0389263 0.00938583 4.1273e-01 9.2762e-01 insignificant 1.00000000 1.0000e+00 insignificant 1.8372e-01 9.9541e-01 insignificant 1.0000000 1.000000 insignificant 0.01540127 0.409297 insignificant 1 insignificant 0.0224719 0.1635833 -0.14150465 8 0.0483121 0.1137954 -0.0654833 9.9984e-01 1.8075e-10 weaklyHypometh 1.0000e+00 2.0084e-08 weaklyHypometh 9.9581e-01 7.1942e-04 weaklyHypometh 1.0000e+00 7.9936e-02 weaklyHypometh -7.9412e-02 1.4755e-01 insignificant 8.4312e-01 insignificant 0.0233683 0.0152225 0.00592435 8 0.0603901 0.0912795 -0.0308894 2.0618e-01 3.2955e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.1978e-01 9.3629e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -4.3549e-03 9.1403e-01 insignificant 1.0000000 insignificant 0.0189949 0.1635833 -0.14417344 8 0.0389263 0.1137954 -0.0748691 9.9996e-01 6.8887e-06 weaklyHypometh 1.0000e+00 6.2625e-04 weaklyHypometh 9.9996e-01 2.3691e-04 weaklyHypometh 1.0000e+00 2.6323e-02 weaklyHypometh -0.0948131 9.5824e-02 insignificant 5.9518e-01 insignificant 0.0198429 0.0152225 2.3235e-03 8 0.0486578 0.0912795 -0.04262168 8.4738e-01 1.6204e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.1305e-01 4.3979e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01975615 0.63314935 insignificant 1.00000 insignificant 0.1703854 0.0152225 0.15242069 8 0.1422443 0.0912795 0.05096473 9.5125e-03 9.8877e-01 weaklyHypermeth 6.3416e-01 1.0000e+00 insignificant 1.0457e-02 9.9956e-01 weaklyHypermeth 1.0000000 1.0000e+00 insignificant 0.0750569 2.3249e-01 insignificant 1.00000000 insignificant chr19 45629650 45630650 53321 SERTAD1 ENSG00000197019 0.7348073 158 6 0.6837662 121 6 0.5732220 110 6 0.6712433 154 5 0.6613215 73 6 0.6705329 273 6 0.5021078 102 6 0.7160744 123 6 0.5570175 62 2 0.5996241 70 5 0.7634964 202 6 0.2662835 43 2 0.6631666 107 6 0.7222222 33 5 0.5825399 96 6 0.7023810 49 2 0.5673611 57 3 0.65679569 111 6 0.6875000 86 6 0.7921339 183 6 0.7509747 59 5 0.5833333 52 5 0.6989796 109 6 0.7115385 78 5 0.7282509 45 5 0.7755319 237 6 0.7205210 104 6 0.4895833 32 2 0.7122575 93 6 0.76945070 184 6 0.6831761 170 6 0.5336149 266 6 0.6708683 136 6 0.6565773 98 6 0.6673109 219 6 0.7251082 41 6 0.702309 96 6 0.76968584 146 6 0.6560583 119 6 0.7597030 121 6 0.7526401 135 6 0.5439394 84 2 0.6886905 108 6 0.7617452 0.7812243 0.6203746 0.7315242 0.7293285 0.7617904 0.6194376 0.79640442 0.6584678 0.79619148 0.8294250 0.5255011 0.82880554 0.8169385 0.7100614 0.75520459 0.7054439 0.7494644 0.78140704 0.8193829 0.7109781 0.66783920 0.7654343 0.76332713 0.8045447 0.8143652 0.6811107 0.6626884 0.6689838 0.75150559 0.74811163 0.7691345 0.7084627 0.6023489 0.8020056 8.0410e-01 0.7950532 0.7704299 0.7744376 0.8197623 0.8164712 0.7343840 0.8112706 1 0.7424311 0.7214836 1.7665e-03 6 0.6293939 0.7366838 -0.10728990 8.4113e-01 2.7635e-01 insignificant 1.00000000 1.0000e+00 insignificant 8.4775e-01 3.4212e-01 insignificant 1.0000000 1.000000 insignificant -0.04108783 0.279350 insignificant 1 insignificant 0.7424311 0.7173913 0.00945018 6 0.6293939 0.6929396 -0.0635457 6.9774e-01 3.8801e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4720e-01 1.8857e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -5.9963e-02 6.7136e-02 insignificant 4.9004e-01 insignificant 0.7425339 0.7671958 -0.02502580 6 0.6252525 0.6534464 -0.0281939 5.9439e-01 1.1663e-01 insignificant 1.0000e+00 9.5602e-01 insignificant 9.2568e-01 2.3754e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -4.1526e-02 4.0231e-01 insignificant 1.0000000 insignificant 0.7214836 0.7173913 0.00789094 6 0.7366838 0.6929396 0.0437442 2.5447e-01 5.2097e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.0708e-01 2.4673e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0188755 5.6530e-01 insignificant 1.0000e+00 insignificant 0.7210932 0.7671958 -2.3749e-02 6 0.7074264 0.6534464 0.05398004 1.4528e-01 1.2800e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.3777e-01 1.7890e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00043854 0.99287124 insignificant 1.00000 insignificant 0.7181943 0.7671958 -0.03264416 6 0.7032662 0.6534464 0.04981984 6.4074e-01 4.1066e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.8523e-01 5.8438e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.0184370 6.8412e-01 insignificant 1.00000000 insignificant chr19 46423650 46424650 53357 AXL ENSG00000167601 0.1207674 400 24 0.0565622 816 30 0.0372675 1281 30 0.0581707 509 24 0.0353912 635 18 0.0413308 709 29 0.0411933 833 26 0.0572383 756 27 0.0101967 1015 29 0.0480194 1294 29 0.0545495 713 29 0.0253709 1260 29 0.0156206 930 29 0.0420129 484 19 0.0228395 1406 29 0.0180802 1272 29 0.0377525 587 25 0.01739438 515 23 0.0631663 889 26 0.0638712 472 29 0.0688337 261 17 0.0241379 371 23 0.0402612 451 20 0.0439063 400 22 0.0549701 266 19 0.0363046 936 30 0.1057325 586 24 0.0851844 302 22 0.0382831 675 29 0.04247875 1029 30 0.0099211 899 28 0.0434001 489 29 0.0044192 506 22 0.0024631 504 26 0.1406250 327 10 0.0032051 114 9 0.074455 445 22 0.00793377 671 23 0.1090553 508 21 0.1040322 522 29 0.0596109 533 24 0.0018315 530 22 0.0646015 498 29 0.0747921 0.0304538 0.0400156 0.0255775 0.0535864 0.0772047 0.0546753 0.02624386 0.0183147 0.07594317 0.0751990 0.0333830 0.03911120 0.0678808 0.0356640 0.03327605 0.0466262 0.0416076 0.03709687 0.0541757 0.0732195 0.01004926 0.0421841 0.09456456 0.0506417 0.0602392 0.0985643 0.0539786 0.0531523 0.04939809 0.01844103 0.0590912 0.0046276 0.0014075 0.1239505 7.3892e-03 0.0379606 0.0152019 0.0226725 0.0199364 0.0197682 0.0018649 0.0092332 10 0.0391058 0.0465116 -6.4416e-03 28 0.0745064 0.0552629 0.01924352 9.6603e-01 3.4533e-01 insignificant 1.00000000 1.0000e+00 insignificant 7.8121e-01 9.8511e-01 insignificant 1.0000000 1.000000 insignificant -0.00611137 0.520858 insignificant 1 insignificant 0.0380042 0.0148033 0.02631413 22 0.0420459 0.0493998 -0.0073539 9.9383e-09 1.0000e+00 weaklyHypermeth 1.1423e-07 1.0000e+00 weaklyHypermeth 2.1925e-10 1.0000e+00 weaklyHypermeth 7.5602e-09 1.0000e+00 weaklyHypermeth 4.4896e-03 8.5823e-01 insignificant 1.0000e+00 insignificant 0.0391198 0.0270270 0.02548771 27 0.0785338 0.1002253 -0.0216915 9.1720e-06 1.0000e+00 weaklyHypermeth 4.8274e-04 1.0000e+00 weaklyHypermeth 5.7748e-06 1.0000e+00 weaklyHypermeth 6.4164e-04 1.0000e+00 weaklyHypermeth -2.4486e-02 2.8034e-01 insignificant 1.0000000 insignificant 0.0463019 0.0148033 0.03130506 22 0.0388800 0.0493998 -0.0105198 1.3666e-04 1.0000e+00 weaklyHypermeth 1.1681e-03 1.0000e+00 weaklyHypermeth 2.1825e-05 1.0000e+00 weaklyHypermeth 3.4643e-04 1.0000e+00 weaklyHypermeth 0.0106010 6.8076e-01 insignificant 1.0000e+00 insignificant 0.0466025 0.0270270 3.5647e-02 26 0.0582501 0.1002253 -0.04197525 1.3910e-03 9.9970e-01 weaklyHypermeth 4.4871e-02 1.0000e+00 weaklyHypermeth 1.0546e-02 1.0000e+00 weaklyHypermeth 4.0561e-01 1.0000e+00 insignificant -0.01837511 0.41378821 insignificant 1.00000 insignificant 0.0136559 0.0138067 0.00296378 20 0.0281695 0.0431344 -0.01496498 9.9984e-01 9.9134e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.0000e+00 9.8609e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.0289761 3.6392e-01 insignificant 1.00000000 insignificant chr19 46523250 46524250 53360 CCDC97 ENSG00000142039 0.1216437 250 12 0.1143034 275 14 0.1193179 267 14 0.0816878 360 11 0.1465660 232 14 0.2586912 424 11 0.1836612 195 14 0.0925762 332 14 0.0607572 321 11 0.1075604 361 13 0.1492832 264 14 0.2080482 270 11 0.0735599 448 10 0.1065855 292 8 0.0565871 504 14 0.1708990 283 9 0.1494875 142 9 0.06391801 440 11 0.0870247 371 14 0.0673376 369 13 0.0971202 201 14 0.0976596 280 8 0.0784203 219 13 0.1145450 229 10 0.0774150 340 11 0.1197233 464 14 0.1773639 225 11 0.0487127 285 11 0.1151461 266 13 0.08722359 452 14 0.1014575 361 14 0.2156907 295 11 0.0468702 251 14 0.0480152 201 14 0.0432836 456 12 0.0000000 110 11 0.126359 217 13 0.03340871 356 14 0.0908767 389 11 0.1287377 317 11 0.0546798 319 13 0.0670220 392 11 0.0701569 339 11 0.2191404 0.1682705 0.1586365 0.1425726 0.1926087 0.1866520 0.1888058 0.12739169 0.1171267 0.17806651 0.2016988 0.2141984 0.09105118 0.1557456 0.0878052 0.12862572 0.1749939 0.1078655 0.06672492 0.0981074 0.1053126 0.11776388 0.1493191 0.22882283 0.1021834 0.1427539 0.2412762 0.1108657 0.2002832 0.11235799 0.10937824 0.3168871 0.0221525 0.0309648 0.0333093 0.0000e+00 0.0942418 0.0327664 0.1290668 0.0876464 0.0919341 0.0928914 0.0956577 6 0.1303125 0.1431340 -1.7953e-02 14 0.1131133 0.1033604 0.00975287 7.8941e-01 1.2719e-01 insignificant 1.00000000 1.0000e+00 insignificant 5.0336e-01 6.5560e-01 insignificant 1.0000000 1.000000 insignificant 0.01010161 0.574966 insignificant 1 insignificant 0.1302784 0.0408548 0.08598538 14 0.1054628 0.0477611 0.0577017 1.3079e-12 9.9650e-01 weaklyHypermeth 2.1799e-11 1.0000e+00 weaklyHypermeth 1.5163e-12 9.9757e-01 weaklyHypermeth 7.2206e-11 1.0000e+00 weaklyHypermeth 7.1319e-02 6.0064e-03 weaklyHypermeth 7.7005e-02 weaklyHypermeth 0.1302784 0.0928246 0.03593476 11 0.1054628 0.0736950 0.0317678 2.5954e-04 9.3792e-01 weaklyHypermeth 1.0382e-02 1.0000e+00 weaklyHypermeth 5.1410e-05 9.7614e-01 weaklyHypermeth 4.6737e-03 1.0000e+00 weaklyHypermeth 3.8680e-02 4.9725e-02 weaklyHypermeth 0.6630004 insignificant 0.1432530 0.0408548 0.10254054 14 0.1181262 0.0477611 0.0703651 3.9061e-11 9.9991e-01 weaklyHypermeth 6.8528e-10 1.0000e+00 weaklyHypermeth 1.2727e-09 9.9860e-01 weaklyHypermeth 5.3030e-08 1.0000e+00 weaklyHypermeth 0.0612171 1.5746e-02 weaklyHypermeth 1.7121e-01 insignificant 0.1432530 0.0928246 5.2956e-02 11 0.1181262 0.0736950 0.04443114 7.8826e-04 9.9971e-01 weaklyHypermeth 2.8152e-02 1.0000e+00 weaklyHypermeth 1.4910e-03 9.9171e-01 weaklyHypermeth 1.1021e-01 1.0000e+00 insignificant 0.02857852 0.14735272 insignificant 1.00000 insignificant 0.0408548 0.0928246 -0.04812738 11 0.0477611 0.0736950 -0.02593393 9.7858e-01 1.6293e-05 weaklyHypometh 1.0000e+00 2.0115e-04 weaklyHypometh 9.8939e-01 2.4560e-03 weaklyHypometh 1.0000000 2.8558e-02 weaklyHypometh -0.0326385 1.6214e-01 insignificant 0.86840578 insignificant chr19 47130950 47131950 53362 ARHGEF1 ENSG00000076928 0.6530048 227 9 0.3450226 415 11 0.4884389 268 12 0.5063287 345 9 0.5476129 122 8 0.5716521 268 12 0.2540564 167 10 0.5993463 164 8 0.2593583 93 9 0.4816783 144 9 0.4550035 343 10 0.6406177 100 9 0.3305168 199 9 0.5250000 42 5 0.4307516 117 9 0.3814815 62 6 0.4751190 70 4 0.49985570 196 10 0.7213416 184 10 0.1994442 223 9 0.7067701 102 9 0.4720952 86 4 0.4647408 143 12 0.5496273 94 9 0.4759740 100 8 0.6065463 444 12 0.4638492 98 8 0.5365079 37 2 0.5356990 251 8 0.48006928 452 11 0.5384478 523 11 0.6654189 335 12 0.0853393 434 11 0.0258929 139 9 0.0794014 368 12 0.2110390 73 3 0.105174 221 9 0.06781304 489 11 0.4227100 205 8 0.6590047 362 11 0.5185876 234 9 0.4054210 242 8 0.4116097 276 8 0.6216852 0.3174313 0.4947590 0.3986585 0.6062909 0.6066123 0.2887689 0.56682066 0.3465664 0.47589953 0.5042902 0.6980344 0.33784181 0.5168652 0.4584678 0.45767013 0.4356927 0.4995131 0.74715642 0.2419684 0.7116254 0.54016807 0.3840930 0.62974077 0.4162240 0.5933071 0.5119940 0.6373726 0.6721565 0.47491657 0.54589941 0.6917392 0.0615322 0.0281760 0.0000000 2.2172e-01 0.0628447 0.0331840 0.4411308 0.5209088 0.4718226 0.3671678 0.4227556 8 0.4623196 0.5658537 -9.4586e-02 10 0.4650293 0.5380789 -0.07304958 9.9991e-01 1.5873e-04 weaklyHypometh 1.00000000 7.9363e-02 weaklyHypometh 9.9961e-01 1.2306e-02 weaklyHypometh 1.0000000 0.878989 insignificant -0.07303060 0.071427 insignificant 1 insignificant 0.4623196 0.0846868 0.40942536 10 0.4650293 0.1096553 0.3553740 2.0525e-34 1.0000e+00 hypermethylated 1.0803e-32 1.0000e+00 hypermethylated 1.5379e-20 1.0000e+00 hypermethylated 1.7088e-18 1.0000e+00 hypermethylated 3.7250e-01 1.3530e-08 hypermethylated 8.4563e-07 hypermethylated 0.4623196 0.4601971 0.00811478 8 0.4650293 0.5364352 -0.0714060 7.3935e-01 1.0414e-01 insignificant 1.0000e+00 8.9011e-01 insignificant 4.1135e-01 6.6827e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -1.5185e-02 7.9936e-01 insignificant 1.0000000 insignificant 0.5658537 0.0846868 0.49306449 11 0.5380789 0.1096553 0.4284235 3.0891e-46 1.0000e+00 hypermethylated 5.1485e-44 1.0000e+00 hypermethylated 6.3721e-18 1.0000e+00 hypermethylated 1.5930e-15 1.0000e+00 hypermethylated 0.4455356 1.0149e-08 hypermethylated 1.2686e-06 hypermethylated 0.5658537 0.4601971 1.0249e-01 8 0.5380789 0.5364352 0.00164361 4.8860e-04 8.7609e-01 weaklyHypermeth 1.8096e-02 1.0000e+00 weaklyHypermeth 1.8432e-03 9.8493e-01 weaklyHypermeth 1.1021e-01 1.0000e+00 insignificant 0.05784556 0.32388944 insignificant 1.00000 insignificant 0.0846868 0.4601971 -0.40018591 8 0.1096553 0.5364352 -0.42677993 1.0000e+00 1.2723e-31 hypomethylated 1.0000e+00 3.1808e-29 hypomethylated 1.0000e+00 6.3883e-13 hypomethylated 1.0000000 1.5971e-10 hypomethylated -0.3876900 3.6009e-04 hypomethylated 0.01636763 hypomethylated chr19 47394950 47395950 53365 POU2F2 ENSG00000028277 0.7927591 718 25 0.5449080 541 22 0.7222216 486 23 0.8059238 683 22 0.7657464 269 22 0.8018345 756 22 0.7487699 331 22 0.7703115 439 22 0.6672961 346 20 0.8068857 520 25 0.7910258 651 25 0.7015696 257 23 0.5718736 621 19 0.6775743 155 7 0.7072327 417 21 0.5880994 185 14 0.5145933 128 16 0.75762776 1171 25 0.6294717 598 25 0.7493645 634 23 0.7582530 271 17 0.7267808 306 15 0.8098314 471 26 0.8276979 191 14 0.7723000 330 17 0.7340012 668 26 0.7646611 369 18 0.6251887 173 15 0.7986523 557 26 0.73868783 735 23 0.7175147 639 26 0.7582620 719 23 0.6892366 482 22 0.7088965 675 25 0.6325758 394 14 0.5539897 186 17 0.650193 315 19 0.69910438 506 21 0.8029509 621 25 0.7920089 760 25 0.8119960 579 21 0.7270786 776 25 0.7635405 516 25 0.7921533 0.5682466 0.7065004 0.8186466 0.7272049 0.8151951 0.7362675 0.71887276 0.6493664 0.80152246 0.7685010 0.6102011 0.50725364 0.7102680 0.6961888 0.63849776 0.5092907 0.6907665 0.66331434 0.7459012 0.7840115 0.65423621 0.8087486 0.78045887 0.7729716 0.6694378 0.7611967 0.7038554 0.7574742 0.69489672 0.66907593 0.7682300 0.6293935 0.5728336 0.5226820 4.4057e-01 0.6786460 0.5901636 0.7756420 0.7775304 0.7924801 0.6668535 0.7419474 8 0.7499495 0.7836441 -2.7108e-02 25 0.6686727 0.7681951 -0.09952241 9.4855e-01 9.1329e-02 insignificant 1.00000000 1.0000e+00 insignificant 9.9500e-01 1.7615e-02 weaklyHypometh 1.0000000 0.978635 insignificant -0.04689812 0.076525 insignificant 1 insignificant 0.7502525 0.7149003 0.05706876 26 0.7147880 0.6697841 0.0450040 6.8021e-05 1.5284e-01 weaklyHypermeth 5.5301e-04 1.0000e+00 weaklyHypermeth 3.0618e-02 1.4677e-01 weaklyHypermeth 2.0277e-01 1.0000e+00 insignificant 5.0089e-02 1.3324e-01 insignificant 7.8841e-01 insignificant 0.7503537 0.8247232 -0.04143581 25 0.7472636 0.7757649 -0.0285013 8.7277e-01 2.1721e-04 weaklyHypometh 1.0000e+00 1.4480e-02 weaklyHypometh 9.6916e-01 4.8527e-03 weaklyHypometh 1.0000e+00 1.8664e-01 insignificant -7.3761e-02 1.0052e-02 weaklyHypometh 0.2701604 insignificant 0.7837239 0.7146208 0.09056596 25 0.7604682 0.6474579 0.1130103 1.0210e-04 6.9640e-01 weaklyHypermeth 9.0354e-04 1.0000e+00 weaklyHypermeth 3.4212e-03 9.1545e-01 weaklyHypermeth 2.9750e-02 1.0000e+00 weaklyHypermeth 0.0969867 6.9278e-03 weaklyHypermeth 8.7693e-02 weaklyHypermeth 0.7848805 0.8247232 -1.2969e-02 24 0.7703205 0.7757649 -0.00544435 5.2152e-01 1.4616e-02 weaklyHypometh 1.0000e+00 3.5944e-01 insignificant 5.0760e-01 1.6000e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02686242 0.23892938 insignificant 1.00000 insignificant 0.7165293 0.8247232 -0.09470300 25 0.7214258 0.7757649 -0.05433904 1.1174e-01 3.9459e-04 weaklyHypometh 1.0000e+00 3.5549e-03 weaklyHypometh 5.0500e-01 2.2266e-02 weaklyHypometh 1.0000000 1.7128e-01 insignificant -0.1238491 2.1318e-03 weaklyHypometh 0.05329527 weaklyHypometh chr19 48969950 48970950 53421 C19orf61 ENSG00000105771 0.0982701 706 24 0.0043706 555 23 0.0632995 696 23 0.0235457 449 24 0.0358238 396 26 0.1402012 771 23 0.0153262 879 23 0.0101052 501 23 0.0055562 587 23 0.0144928 595 23 0.0182042 905 29 0.0502384 769 23 0.0082453 667 23 NA 0 0 0.0048587 865 23 0.0089277 857 23 0.0090872 665 23 0.11520176 348 20 0.0034114 522 23 0.0826154 880 23 0.0043478 288 22 0.0259178 245 12 0.0874227 586 25 0.0570466 323 23 0.0642587 229 17 0.0383354 1036 23 0.0483529 358 22 0.0079051 246 19 0.0115536 433 23 0.00883776 825 23 0.0013793 731 23 0.0102412 1057 23 0.0553686 424 23 0.0300920 633 23 0.0113757 526 20 0.0437488 293 18 0.080189 124 12 0.07839647 674 23 0.0087851 680 24 0.0061996 804 24 0.0889894 422 15 0.0189135 600 21 0.0985912 570 22 0.0240695 0.0053386 0.0189280 0.0101397 0.0044377 0.0238404 0.0155112 0.01449496 0.0118289 0.01139217 0.0087407 0.0171303 0.01063632 NA 0.0033787 0.00645823 0.0080509 0.0142672 0.00250657 0.0061775 0.0062195 0.01520344 0.0091028 0.01582127 0.0444019 0.0056440 0.0134804 0.0034368 0.0174217 0.01116065 0.00029268 0.0214230 0.0443993 0.0360969 0.0100054 4.5393e-02 0.0339885 0.0644326 0.0077067 0.0070566 0.0015947 0.0173578 0.0067904 15 0.0127930 0.0108559 1.5745e-03 23 0.0868331 0.0932348 -0.00640164 9.9802e-02 9.2563e-01 insignificant 1.00000000 1.0000e+00 insignificant 3.2132e-01 9.9460e-01 insignificant 1.0000000 1.000000 insignificant 0.00699560 0.585513 insignificant 1 insignificant 0.0121173 0.0422588 -0.02997349 23 0.0283979 0.0749232 -0.0465253 9.9829e-01 4.6973e-17 weaklyHypometh 1.0000e+00 6.7104e-15 weaklyHypometh 9.9721e-01 6.2509e-05 weaklyHypometh 1.0000e+00 7.8136e-03 weaklyHypometh -1.2400e-02 4.1455e-01 insignificant 1.0000e+00 insignificant 0.0134308 0.0110641 0.00312516 23 0.1141141 0.1014484 0.0126657 2.0419e-01 9.9705e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.4457e-01 9.9894e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -6.8336e-03 7.7239e-01 insignificant 1.0000000 insignificant 0.0099369 0.0422588 -0.03132275 23 0.0345971 0.0749232 -0.0403261 1.0000e+00 1.7528e-10 weaklyHypometh 1.0000e+00 2.1910e-08 weaklyHypometh 1.0000e+00 2.3232e-04 weaklyHypometh 1.0000e+00 2.6323e-02 weaklyHypometh -0.0193952 1.8712e-01 insignificant 9.9534e-01 insignificant 0.0108627 0.0107667 1.3415e-03 23 0.0990620 0.0797091 0.01935281 8.7785e-01 6.8768e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7644e-01 9.5588e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01382920 0.55457280 insignificant 1.00000 insignificant 0.0423221 0.0092470 0.03398296 23 0.0804731 0.0142232 0.06624993 2.2918e-05 9.9998e-01 weaklyHypermeth 3.8196e-03 1.0000e+00 weaklyHypermeth 2.7058e-02 9.9999e-01 weaklyHypermeth 1.0000000 1.0000e+00 insignificant 0.0055660 8.1793e-01 insignificant 1.00000000 insignificant chr19 49872150 49873150 53428 CEACAM19 ENSG00000186567 0.7906054 222 5 0.6417825 155 5 0.6007466 99 5 0.8514286 72 5 0.8550000 33 5 0.8149629 250 5 0.7519248 100 5 0.7812516 93 5 0.6939194 82 5 0.7071895 88 5 0.8079365 140 5 0.7482906 54 5 0.7445432 106 5 NA 0 0 0.7384416 88 5 0.6854701 58 5 0.5891209 53 5 0.73979798 124 5 0.6746633 109 5 0.7323626 336 5 0.7766667 52 5 0.8079412 67 5 0.7404762 151 5 0.7663743 77 5 0.7792208 47 5 0.7379371 140 5 0.7087926 86 5 0.8022222 38 4 0.6955080 108 5 0.75488215 147 5 0.8311347 123 5 0.7736495 335 5 0.5349282 105 5 0.4646753 88 5 0.1615854 85 2 0.5870130 64 5 0.711429 56 5 0.59211729 127 5 0.7831096 215 5 0.7282137 209 5 0.7548835 177 5 0.8063256 204 5 0.7855901 146 5 0.7933887 0.6486433 0.6057861 0.8567019 0.8564815 0.8158008 0.7547892 0.78791062 0.6942833 0.71726452 0.8112507 0.7425609 0.75310435 NA 0.7422579 0.69808484 0.6000102 0.7441779 0.67577083 0.7398007 0.7885802 0.80770016 0.7477036 0.77339181 0.7859548 0.7396278 0.7129078 0.8117284 0.6976041 0.75765531 0.83101694 0.7722185 0.5386541 0.4659452 0.2429133 5.9148e-01 0.7121693 0.5922999 0.7894396 0.7342679 0.7628141 0.8119080 0.7903439 5 0.7533156 0.7695113 -1.6566e-02 5 0.7421012 0.7577075 -0.01560623 6.6322e-01 1.9812e-01 insignificant 1.00000000 1.0000e+00 insignificant 9.4456e-01 1.6538e-01 insignificant 1.0000000 1.000000 insignificant -0.03038616 0.154037 lowCoverage 1 lowCoverage 0.7533156 0.4857143 0.28718723 5 0.7421012 0.5136337 0.2284675 3.2538e-11 9.8953e-01 hypermethylated 4.5191e-10 1.0000e+00 hypermethylated 5.4334e-06 9.9488e-01 hypermethylated 8.6244e-05 1.0000e+00 hypermethylated 2.2556e-01 3.1565e-02 lowCoverage 2.6979e-01 lowCoverage 0.7533156 0.7886435 -0.02612321 5 0.7421012 0.7689607 -0.0268595 9.2535e-01 1.1084e-01 insignificant 1.0000e+00 9.1609e-01 insignificant 9.4458e-01 8.7254e-02 insignificant 1.0000e+00 9.4842e-01 insignificant -3.7444e-02 1.0636e-01 lowCoverage 1.0000000 lowCoverage 0.7695113 0.4857143 0.30849516 5 0.7577075 0.5136337 0.2440737 1.0833e-08 9.9977e-01 hypermethylated 1.5257e-07 1.0000e+00 hypermethylated 3.6109e-06 9.9886e-01 hypermethylated 7.8497e-05 1.0000e+00 hypermethylated 0.2559425 2.0288e-02 lowCoverage 1.9322e-01 lowCoverage 0.7695113 0.7886435 -9.9300e-03 5 0.7577075 0.7689607 -0.01125327 5.2044e-01 1.3419e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.1058e-01 6.7030e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00705741 0.70017817 lowCoverage 1.00000 lowCoverage 0.4857143 0.7886435 -0.30894178 5 0.5136337 0.7689607 -0.25532702 9.8828e-01 6.7652e-08 hypomethylated 1.0000e+00 1.3806e-06 hypomethylated 9.9741e-01 1.4202e-04 hypomethylated 1.0000000 2.7727e-03 hypomethylated -0.2629999 1.8153e-02 lowCoverage 0.20794285 lowCoverage chr19 49912550 49913550 53431 CEACAM16 ENSG00000213892 0.6269023 216 6 0.5376984 64 6 0.6344416 117 6 0.6626573 109 6 0.7722222 46 6 0.6514272 296 6 0.6291209 78 6 0.6989418 95 6 0.6044238 94 6 0.7324580 88 6 0.6964915 158 6 0.7569444 78 6 0.7326515 101 6 NA 0 0 0.6750000 91 6 0.5830474 82 6 0.7265977 82 6 0.70192308 106 6 0.7383966 118 6 0.6140013 209 6 0.7916667 38 5 0.7491814 53 5 0.5806633 107 6 0.9583333 21 1 0.6523810 32 5 0.7193651 166 6 0.7185994 64 4 0.7944444 53 5 0.6649735 88 6 0.68058972 154 6 0.6292189 181 6 0.6872598 288 6 0.5173761 75 6 0.5863426 80 6 0.7189394 100 6 0.6777778 50 5 0.592038 67 4 0.58939772 141 6 0.6539912 178 6 0.6852047 171 6 0.6869748 158 6 0.6544012 160 6 0.7151551 140 6 0.6316115 0.5713669 0.6709566 0.6878387 0.7941854 0.6418257 0.6428287 0.71097952 0.6372425 0.75031748 0.7037621 0.8024611 0.73668001 NA 0.6893782 0.66481383 0.7416972 0.7289056 0.71601699 0.6001364 0.7629534 0.70468521 0.5892444 0.94170984 0.6044412 0.7330817 0.7050963 0.7607945 0.6710042 0.68512730 0.64453656 0.6881182 0.4899943 0.5818581 0.6949835 6.7369e-01 0.6440276 0.5963817 0.6657367 0.7069594 0.6933124 0.6622479 0.7250776 4 0.6745961 0.6883534 -1.0937e-02 6 0.6658716 0.6805086 -0.01463704 6.8214e-01 1.7053e-01 insignificant 1.00000000 1.0000e+00 insignificant 5.0919e-01 9.3979e-02 insignificant 1.0000000 1.000000 insignificant -0.04650302 0.163759 insignificant 1 insignificant 0.6745961 0.6257310 0.05298366 6 0.6658716 0.6199059 0.0459657 4.2576e-02 9.7547e-01 weaklyHypermeth 2.0870e-01 1.0000e+00 insignificant 1.2303e-02 9.9537e-01 weaklyHypermeth 9.2502e-02 1.0000e+00 weaklyHypermeth 5.8741e-02 1.1507e-01 insignificant 7.0519e-01 insignificant 0.6745961 0.6877323 -0.01252605 6 0.6658716 0.6771842 -0.0113126 6.5583e-01 7.8351e-02 insignificant 1.0000e+00 7.7575e-01 insignificant 2.3945e-01 3.9441e-02 weaklyHypometh 1.0000e+00 6.5165e-01 insignificant -6.7587e-03 7.2149e-01 insignificant 1.0000000 insignificant 0.6883534 0.6257310 0.06244913 6 0.6805086 0.6199059 0.0606027 9.2177e-03 9.9548e-01 weaklyHypermeth 5.2605e-02 1.0000e+00 weaklyHypermeth 1.2437e-02 9.9977e-01 weaklyHypermeth 9.5666e-02 1.0000e+00 weaklyHypermeth 0.1052444 2.3060e-02 weaklyHypermeth 2.1123e-01 insignificant 0.6883534 0.6877323 -4.8153e-04 6 0.6805086 0.6771842 0.00332443 5.4094e-01 1.8235e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.9384e-01 5.0930e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03974431 0.21520956 insignificant 1.00000 insignificant 0.6257310 0.6877323 -0.06342054 6 0.6199059 0.6771842 -0.05727831 7.6747e-01 2.1885e-03 weaklyHypometh 1.0000e+00 1.6092e-02 weaklyHypometh 8.3718e-01 7.8986e-03 weaklyHypometh 1.0000000 7.2465e-02 weaklyHypometh -0.0655001 8.1461e-02 insignificant 0.56179749 insignificant chr19 49919950 49920950 53432 CEACAM16 ENSG00000213892 0.4566876 488 15 0.4911862 509 15 0.5412675 448 15 0.4870218 505 15 0.6626470 186 14 0.5879435 640 15 0.5598881 473 15 0.5714471 395 15 0.6041495 525 15 0.4923797 466 15 0.6071016 460 15 0.5209517 293 15 0.4755479 619 15 0.5582915 162 8 0.5953538 503 15 0.5152133 210 15 0.3438304 323 14 0.44920678 514 14 0.6483465 329 15 0.3876468 608 16 0.5837120 180 15 0.3889913 269 10 0.6018075 466 15 0.4152135 156 12 0.6290332 151 9 0.7513684 616 15 0.5662850 214 12 0.5390247 159 11 0.4883901 405 15 0.73019231 591 15 0.6031183 465 11 0.6684844 552 11 0.1229352 541 15 0.1021971 355 15 0.0000000 267 13 0.3155844 112 11 0.340335 248 16 0.52689817 513 11 0.4919960 633 15 0.4184783 595 15 0.2780147 477 15 0.4145528 492 15 0.4405226 438 14 0.4581001 0.4646931 0.5269659 0.4800082 0.6234210 0.5453554 0.5472444 0.59293702 0.5802261 0.54527021 0.5626453 0.5136064 0.44506053 0.5484893 0.6211471 0.45400092 0.2957706 0.4867506 0.67290209 0.3485713 0.6251551 0.33037835 0.5854794 0.46623140 0.6582158 0.7970183 0.4786957 0.5994166 0.5401780 0.74801762 0.68370771 0.6675026 0.0834476 0.0810914 0.0162721 2.3197e-01 0.2667521 0.4372402 0.4864368 0.3830373 0.2167953 0.4374119 0.4238451 10 0.5109750 0.6362775 -1.2797e-01 15 0.5220881 0.6209514 -0.09886333 9.9995e-01 5.3060e-13 weaklyHypometh 1.00000000 5.3060e-10 weaklyHypometh 9.9670e-01 1.8435e-05 weaklyHypometh 1.0000000 0.018435 weaklyHypometh -0.05266296 0.172842 insignificant 1 insignificant 0.5109750 0.2062868 0.30559892 15 0.5220881 0.2304085 0.2916796 1.7568e-39 1.0000e+00 hypermethylated 1.3514e-37 1.0000e+00 hypermethylated 6.6914e-19 1.0000e+00 hypermethylated 5.5761e-17 1.0000e+00 hypermethylated 2.9315e-01 1.2917e-02 weaklyHypermeth 1.4040e-01 insignificant 0.5109750 0.3840607 0.12438934 15 0.5220881 0.4306311 0.0914570 7.1620e-12 9.9024e-01 weaklyHypermeth 2.3873e-09 1.0000e+00 weaklyHypermeth 1.3293e-10 9.9675e-01 weaklyHypermeth 4.4310e-08 1.0000e+00 weaklyHypermeth 1.1909e-01 2.3014e-02 weaklyHypermeth 0.4342265 insignificant 0.6362775 0.2062868 0.43185352 15 0.6209514 0.2304085 0.3905430 9.0259e-33 1.0000e+00 hypermethylated 7.5216e-31 1.0000e+00 hypermethylated 1.5672e-15 1.0000e+00 hypermethylated 1.5672e-13 1.0000e+00 hypermethylated 0.3458100 5.3637e-03 weaklyHypermeth 7.2483e-02 weaklyHypermeth 0.6362775 0.3840607 2.4539e-01 15 0.6209514 0.4306311 0.19032037 6.6805e-18 9.9826e-01 hypermethylated 6.6805e-15 1.0000e+00 hypermethylated 8.4159e-10 9.9787e-01 hypermethylated 8.4159e-07 1.0000e+00 hypermethylated 0.17175550 0.00448687 weaklyHypermeth 0.42873 insignificant 0.2062868 0.3840607 -0.18697527 15 0.2304085 0.4306311 -0.20022261 1.0000e+00 1.3386e-08 weaklyHypometh 1.0000e+00 2.9746e-07 weaklyHypometh 1.0000e+00 4.9464e-06 weaklyHypometh 1.0000000 1.7057e-04 weaklyHypometh -0.1740545 8.5743e-02 insignificant 0.57545834 insignificant chr19 49949150 49950150 53435 BCL3 ENSG00000069399 0.0444444 46 2 0.1900000 87 5 0.0192308 32 2 0.0305263 67 3 0.2048951 60 6 0.1404483 140 3 0.1786492 73 5 0.0238095 41 3 0.1333333 39 3 0.0833333 29 3 0.0174897 78 5 0.1200000 19 3 0.3000000 11 0 0.1000000 19 1 0.1303030 24 1 0.0000000 18 1 1.0000000 1 0 0.06003584 45 1 0.0227273 66 3 0.2424242 76 3 0.1785714 43 3 0.0000000 16 1 0.1571429 39 3 0.1148747 46 3 0.4156723 193 5 0.1299107 72 3 0.0439560 63 5 0.0000000 44 2 0.0432099 65 5 0.15081699 96 5 0.3247563 111 6 0.1296591 76 5 0.1825000 54 3 0.0842105 58 3 0.1742424 77 5 0.1654135 86 5 0.129721 86 5 0.12187500 118 5 0.1776961 79 3 0.0261438 75 2 0.0640432 72 3 0.1851852 28 1 0.2325581 76 4 0.1111111 0.1600000 0.0769231 0.0657895 0.1069231 0.1379416 0.0899782 0.06333333 0.1000000 0.00000000 0.0537037 0.3000000 0.15000000 0.2500000 0.1500000 0.00000000 NA 0.1460872 0.09090909 0.1727273 0.0428571 0.00000000 0.1357143 0.15372960 0.1517803 0.1138393 0.0357143 0.0000000 0.1296296 0.07973856 0.06140351 0.0717011 0.2100000 0.2105263 0.5136364 4.7368e-02 0.3326316 0.2671875 0.1774510 0.0666667 0.1671296 0.2114719 0.0465116 0 0.1175858 0.0894118 1.5044e-02 3 0.1244973 0.1448848 -0.02038744 9.9804e-01 9.9524e-01 lowCoverage 1.00000000 1.0000e+00 lowCoverage 9.9995e-01 9.8238e-01 lowCoverage 1.0000000 1.000000 lowCoverage 0.01136832 0.851724 lowCoverage 1 lowCoverage 0.1140065 0.2574468 -0.19344434 3 0.1513333 0.1772490 -0.0259157 9.9916e-01 3.4626e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.9991e-01 9.4371e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.0887e-03 8.5962e-01 lowCoverage 1.0000e+00 lowCoverage 0.1120879 0.1590214 -0.01480640 2 0.0851515 0.2071829 -0.1220314 9.9973e-01 9.9961e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 1.0000e+00 9.7745e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 1.4957e-02 8.1306e-01 lowCoverage 1.0000000 lowCoverage 0.0886228 0.2589474 -0.16753390 5 0.2099816 0.1439157 0.0660659 5.6746e-01 1.3898e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4309e-01 8.3902e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0022796 9.5433e-01 lowCoverage 1.0000e+00 lowCoverage 0.0784314 0.1585366 -4.0193e-02 2 0.0541436 0.1899176 -0.13577402 9.9990e-01 9.4024e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.9985e-01 9.2515e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.00358892 0.94743642 lowCoverage 1.00000 lowCoverage 0.2570194 0.1590214 0.21750930 2 0.1053396 0.2071829 -0.10184331 9.2077e-01 1.0000e+00 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.9613e-01 9.9985e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage 0.0058685 8.9437e-01 lowCoverage 1.00000000 lowCoverage chr19 50104550 50105550 53441 APOE ENSG00000130203 0.8577778 60 5 0.9500000 20 1 0.3200000 12 1 0.8403175 70 5 1.0000000 4 0 0.5709184 89 3 0.4000000 5 0 0.8200000 30 4 0.5000000 8 0 0.7500000 3 0 0.7507648 39 5 1.0000000 1 0 0.8333333 22 3 NA 0 0 0.3333333 6 0 0.5000000 4 0 0.7500000 11 0 0.80471734 70 5 0.8251208 67 5 0.5150246 79 3 0.8958333 20 2 0.7833333 32 4 0.7190476 45 5 0.6666667 5 0 0.7708333 19 2 0.7752747 56 5 0.8833333 17 1 0.8750000 6 0 0.9047619 25 2 0.82666667 59 5 0.7627867 89 5 0.6730769 84 3 0.7311111 33 3 0.5533333 25 2 0.5566434 72 4 0.8000000 8 0 0.783333 14 2 0.53323232 56 3 0.7384848 60 3 0.7462782 53 5 0.7908333 55 5 0.6266667 20 1 0.7988012 52 5 0.8125000 1.0000000 0.5000000 0.8095238 0.9805750 0.5530449 0.3125000 0.75000000 0.3437500 0.67846394 0.7444986 NA 0.83333333 NA 0.2521214 0.59441756 0.6875000 0.7689255 0.79619565 0.4453510 0.9114583 0.72916667 0.7127976 0.67694654 0.7968750 0.7846841 0.8802083 0.8437500 0.8511905 0.75694444 0.69917023 0.5757212 0.6840278 0.4062500 0.3072552 6.8750e-01 0.7791667 0.5762311 0.6197917 0.6841518 0.7513021 0.4791667 0.7424451 0 0.7383333 0.7724289 -2.4732e-02 3 0.7469723 0.7897601 -0.04278784 8.2761e-01 1.0558e-01 lowCoverage 1.00000000 1.0000e+00 lowCoverage 9.8507e-01 1.1820e-01 lowCoverage 1.0000000 1.000000 lowCoverage -0.09359641 0.103837 lowCoverage 1 lowCoverage 0.7383333 0.6009615 0.13653408 2 0.7469723 0.6054386 0.1415337 1.0405e-04 9.0803e-01 lowCoverage 8.3237e-04 1.0000e+00 lowCoverage 3.4217e-01 7.9036e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 4.1513e-02 5.6931e-01 lowCoverage 1.0000e+00 lowCoverage 0.7383333 0.7333333 0.00748197 3 0.7469723 0.7564782 -0.0095058 5.6451e-01 4.4652e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 5.0556e-01 4.4211e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -3.9091e-02 5.1248e-01 lowCoverage 1.0000000 lowCoverage 0.7724289 0.6009615 0.17854409 4 0.7897601 0.6054386 0.1843215 5.0731e-06 9.1981e-01 lowCoverage 4.9736e-05 1.0000e+00 lowCoverage 2.4635e-02 9.3454e-01 lowCoverage 1.6990e-01 1.0000e+00 lowCoverage 0.1351090 4.6270e-02 lowCoverage 3.3774e-01 lowCoverage 0.7724289 0.7333333 2.7937e-02 5 0.7897601 0.7564782 0.03328199 7.5129e-02 3.2290e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.8994e-02 6.5395e-01 weaklyHypermeth 5.7726e-01 1.0000e+00 insignificant 0.05450503 0.19598998 lowCoverage 1.00000 lowCoverage 0.6009615 0.7333333 -0.13723552 4 0.6054386 0.7564782 -0.15103954 9.8844e-01 1.5938e-03 lowCoverage 1.0000e+00 1.2550e-02 lowCoverage 9.8106e-01 3.0606e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage -0.0806039 2.1297e-01 lowCoverage 1.00000000 lowCoverage chr19 50651050 50652050 53458 ERCC1 ENSG00000012061 0.3549352 247 8 0.1590596 184 9 0.1868250 293 9 0.3263838 114 8 0.1828042 126 9 0.2884381 279 9 0.1610859 283 9 0.1746489 189 9 0.1501932 238 9 0.3704990 141 9 0.3006338 319 9 0.2099267 225 9 0.0633348 259 9 NA 0 0 0.2017357 261 9 0.1475015 238 9 0.2464192 195 9 0.17972028 129 9 0.0944544 235 9 0.2202968 220 9 0.1798535 98 7 0.1131716 100 7 0.2380171 217 9 0.1686251 131 9 0.1802198 59 7 0.1381823 296 9 0.1025489 171 9 0.0667989 64 5 0.2395479 140 7 0.11363961 397 9 0.1153324 289 9 0.1413777 378 9 0.0030030 201 9 0.0079365 190 9 0.0000000 139 5 0.0000000 129 8 0.005848 86 8 0.00529101 193 9 0.2433150 151 9 0.2175585 245 9 0.3156770 118 8 0.1503450 217 9 0.2328898 137 7 0.3166326 0.1450853 0.1984320 0.2942164 0.1688764 0.2734839 0.1506570 0.16628090 0.1331995 0.36120926 0.2900705 0.1944307 0.05144200 NA 0.2009652 0.15147842 0.2394690 0.1910234 0.08179783 0.2071285 0.1679595 0.11547439 0.2282329 0.15391388 0.2012328 0.1125860 0.1105354 0.0611578 0.2253504 0.10076463 0.10883251 0.1377086 0.0070659 0.0072362 0.0022253 0.0000e+00 0.0137599 0.0038904 0.2199487 0.2033013 0.3030907 0.1151615 0.2341277 7 0.2124551 0.1645299 4.5299e-02 9 0.2038323 0.1540039 0.04982831 5.2044e-04 9.9996e-01 weaklyHypermeth 0.07434906 1.0000e+00 weaklyHypermeth 1.4780e-04 1.0000e+00 weaklyHypermeth 0.0369511 1.000000 weaklyHypermeth 0.06174462 0.018098 weaklyHypermeth 1 insignificant 0.2124551 0.0042644 0.20866859 9 0.2038323 0.0047116 0.1991207 3.8779e-21 1.0000e+00 hypermethylated 1.1406e-19 1.0000e+00 hypermethylated 5.8687e-20 1.0000e+00 hypermethylated 5.8687e-18 1.0000e+00 hypermethylated 2.0784e-01 2.5715e-09 hypermethylated 2.3377e-07 hypermethylated 0.2124551 0.2062212 -0.01374801 9 0.2038323 0.2223071 -0.0184749 2.8882e-01 1.2066e-01 insignificant 1.0000e+00 9.7715e-01 insignificant 4.0676e-01 2.0163e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -2.0436e-02 5.4823e-01 insignificant 1.0000000 insignificant 0.1645299 0.0042644 0.16635801 9 0.1540039 0.0047116 0.1492923 5.9001e-19 1.0000e+00 weaklyHypermeth 2.1072e-17 1.0000e+00 weaklyHypermeth 3.7629e-13 1.0000e+00 weaklyHypermeth 2.8946e-11 1.0000e+00 weaklyHypermeth 0.1460965 1.1338e-06 weaklyHypermeth 8.3420e-05 weaklyHypermeth 0.1645299 0.2062212 -6.6602e-02 9 0.1540039 0.2223071 -0.06830318 9.7675e-01 1.4800e-04 weaklyHypometh 1.0000e+00 1.2334e-02 weaklyHypometh 9.9222e-01 2.0970e-03 weaklyHypometh 1.0000e+00 1.9063e-01 insignificant -0.08218085 0.03185430 weaklyHypometh 0.83827 insignificant 0.0042644 0.2062212 -0.19680397 9 0.0047116 0.2223071 -0.21759553 1.0000e+00 1.1302e-16 weaklyHypometh 1.0000e+00 5.9482e-15 weaklyHypometh 1.0000e+00 2.1277e-11 weaklyHypometh 1.0000000 2.1277e-09 weaklyHypometh -0.2282773 9.7566e-04 hypomethylated 0.03083912 hypomethylated chr19 50742750 50743750 53462 VASP ENSG00000125753 0.7784719 283 8 0.7584921 350 9 0.6262435 272 9 0.7942299 280 9 0.7796410 198 9 0.8454963 374 9 0.7210840 247 10 0.7790693 300 10 0.8546850 247 8 0.8550593 203 7 0.7431209 467 10 0.7108017 125 7 0.6063019 273 9 0.8556953 149 8 0.7077399 258 8 0.8201900 87 7 0.6230559 321 6 0.79718894 389 9 0.6782364 324 7 0.8059918 318 8 0.8147457 114 6 0.6924695 123 7 0.8288583 296 8 0.6607778 169 8 0.8529045 116 9 0.8373804 347 9 0.8173284 232 9 0.7038297 129 9 0.7784648 321 8 0.73783408 379 8 0.6002149 434 8 0.8348604 380 9 0.7150026 287 9 0.7222423 193 8 0.4470947 392 8 0.2731481 29 3 0.599022 296 10 0.47265211 438 9 0.6404661 255 8 0.7947670 267 8 0.7131268 237 8 0.9091469 204 7 0.7670323 257 9 0.8153528 0.8206234 0.7039281 0.8730138 0.8502697 0.8912780 0.8125374 0.81069004 0.8471826 0.86808521 0.8759329 0.8474727 0.65983606 0.8630034 0.8539058 0.86147769 0.7065565 0.8475794 0.60486128 0.8205233 0.8587922 0.70661825 0.8978842 0.84833531 0.8712877 0.8487942 0.8220843 0.9392482 0.7678537 0.84887467 0.68567196 0.9419679 0.6893970 0.7769129 0.4846908 2.7583e-01 0.6032608 0.4116510 0.8171559 0.9025212 0.8256580 0.9182527 0.9030593 6 0.7913998 0.8220395 -3.8290e-02 8 0.6911845 0.7147205 -0.02353598 9.9922e-01 1.3880e-01 insignificant 1.00000000 1.0000e+00 insignificant 9.9970e-01 3.4105e-01 insignificant 1.0000000 1.000000 insignificant -0.00626597 0.834429 insignificant 1 insignificant 0.7915065 0.5296636 0.23077856 9 0.7184966 0.4575892 0.2609073 3.6736e-10 3.8707e-01 hypermethylated 4.5920e-09 1.0000e+00 hypermethylated 4.7400e-07 9.5181e-01 hypermethylated 9.1154e-06 1.0000e+00 hypermethylated 2.1885e-01 2.6389e-02 weaklyHypermeth 2.3690e-01 insignificant 0.7917889 0.8483607 -0.05966092 8 0.7326320 0.7541273 -0.0214953 5.9572e-01 8.3941e-02 insignificant 1.0000e+00 7.9841e-01 insignificant 7.6047e-01 1.1373e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -7.8681e-03 8.7582e-01 insignificant 1.0000000 insignificant 0.8229476 0.5296636 0.27791867 8 0.7513472 0.4575892 0.2937580 2.9402e-09 9.8870e-01 hypermethylated 4.3884e-08 1.0000e+00 hypermethylated 2.3065e-06 9.9922e-01 hypermethylated 5.3639e-05 1.0000e+00 hypermethylated 0.2251120 2.3236e-02 weaklyHypermeth 2.1123e-01 insignificant 0.8231023 0.8483607 -2.3822e-02 8 0.7744419 0.7541273 0.02031458 2.0070e-01 4.2929e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.7244e-01 6.5831e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00160211 0.97571071 insignificant 1.00000 insignificant 0.5309626 0.8483607 -0.27512666 8 0.5823863 0.7541273 -0.17174103 8.6920e-01 1.7070e-06 hypomethylated 1.0000e+00 2.7533e-05 hypomethylated 9.9607e-01 7.9847e-05 hypomethylated 1.0000000 1.6295e-03 hypomethylated -0.2267141 2.6648e-02 weaklyHypometh 0.25321791 insignificant chr19 50793150 50794150 53465 OPA3 ENSG00000125741 0.1300325 347 11 0.1246251 327 11 0.1610011 337 11 0.0792201 282 10 0.1404486 216 11 0.1955059 843 11 0.1699207 253 11 0.2061220 338 11 0.1610282 493 11 0.1528605 428 11 0.1626171 280 11 0.2137642 224 11 0.0656162 420 11 0.1616923 276 9 0.1266485 367 11 0.3312002 156 11 0.3526629 157 10 0.09467711 430 9 0.0973586 135 7 0.0677305 660 11 0.1525936 88 10 0.0934212 232 8 0.1375243 276 11 0.0979109 158 11 0.1429498 140 9 0.1271183 466 11 0.0732675 316 11 0.0500333 142 9 0.1211378 181 11 0.09209328 461 11 0.1551895 522 11 0.0473264 755 11 0.0644070 297 11 0.0454545 149 6 0.0031250 265 8 0.0952381 33 4 0.093319 292 11 0.05377034 245 11 0.1790380 280 10 0.0743802 239 11 0.0666667 180 9 0.1246156 219 11 0.0905118 245 10 0.1007892 0.0872334 0.1304954 0.0587881 0.0804336 0.1443763 0.1042877 0.15047918 0.1057978 0.12559568 0.1176197 0.2193581 0.05367288 0.1033787 0.0767497 0.27193494 0.2398324 0.0673179 0.07326537 0.0437253 0.1214332 0.05034214 0.1329623 0.04951334 0.1132390 0.0871333 0.0443802 0.0264044 0.0754026 0.06031008 0.10048405 0.0264017 0.0347676 0.0246063 0.0037894 6.5528e-02 0.0518185 0.0293647 0.1176191 0.0388332 0.0323163 0.0792748 0.0615183 6 0.1446406 0.1003479 4.5062e-02 11 0.2028400 0.0869264 0.11591364 2.0786e-04 9.9999e-01 weaklyHypermeth 0.03464348 1.0000e+00 weaklyHypermeth 8.3836e-06 9.9993e-01 weaklyHypermeth 0.0041918 1.000000 weaklyHypermeth 0.05218944 0.014633 weaklyHypermeth 1 insignificant 0.1445385 0.0507416 0.09797943 11 0.1488110 0.0475232 0.1012877 3.9629e-11 1.0000e+00 weaklyHypermeth 5.3553e-10 1.0000e+00 weaklyHypermeth 8.7980e-12 1.0000e+00 weaklyHypermeth 3.9991e-10 1.0000e+00 weaklyHypermeth 1.0052e-01 1.9300e-04 weaklyHypermeth 4.7074e-03 weaklyHypermeth 0.1445385 0.0851247 0.03210792 11 0.1488110 0.1192919 0.0295191 8.0691e-04 9.7886e-01 weaklyHypermeth 2.6897e-02 1.0000e+00 weaklyHypermeth 6.1339e-05 9.9979e-01 weaklyHypermeth 5.1116e-03 1.0000e+00 weaklyHypermeth 5.2694e-02 7.5318e-02 insignificant 0.8368699 insignificant 0.1004823 0.0507416 0.05334432 11 0.1027312 0.0475232 0.0552080 3.2363e-04 1.0000e+00 weaklyHypermeth 2.5891e-03 1.0000e+00 weaklyHypermeth 8.9354e-06 1.0000e+00 weaklyHypermeth 1.6547e-04 1.0000e+00 weaklyHypermeth 0.0483282 1.9531e-02 weaklyHypermeth 1.8780e-01 insignificant 0.1004823 0.0851247 -1.3449e-02 11 0.1027312 0.1192919 -0.01656066 2.2532e-01 3.3320e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.0505e-02 6.1503e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00050474 0.98336199 insignificant 1.00000 insignificant 0.0507416 0.0851247 -0.06796818 11 0.0475232 0.1192919 -0.07176861 9.6625e-01 3.4123e-04 weaklyHypometh 1.0000e+00 3.1891e-03 weaklyHypometh 9.9026e-01 2.6945e-02 weaklyHypometh 1.0000000 1.9668e-01 insignificant -0.0478234 9.4148e-02 insignificant 0.62349890 insignificant chr19 50810550 50811550 53467 GPR4 ENSG00000177464 0.6433155 71 4 0.4450753 251 6 0.3924466 56 4 0.4124579 65 4 0.3755221 122 6 0.6057423 66 4 0.4569597 144 6 0.3799889 121 6 0.4111111 62 4 0.4222222 41 4 0.5276532 177 6 0.4791667 33 3 0.4857143 39 4 0.3995290 58 4 0.5690276 64 4 0.3333333 28 4 0.7547689 584 4 0.77777778 31 4 0.6134236 52 4 0.4736264 58 4 0.3611111 37 6 0.5000000 6 0 0.6071429 76 3 0.5212674 73 6 0.4377104 47 4 0.4544220 169 6 0.2783626 83 3 0.5210979 36 4 0.6457143 52 4 0.45772123 154 6 0.4411829 162 6 0.5824561 54 4 0.7308327 117 6 0.7535714 69 4 0.8814743 105 6 0.8666667 13 1 0.610417 96 6 0.65830883 161 6 0.4870338 59 4 0.6966999 75 4 0.6533730 109 4 0.6877289 32 4 0.5416667 93 4 0.5482761 0.5424133 0.6686315 0.5981179 0.6445744 0.5931911 0.5901088 0.51474065 0.5846154 0.61367521 0.6485710 0.4380342 0.73003663 0.6961585 0.7231559 0.46866097 0.7764490 0.7827635 0.75844175 0.5996713 0.5276353 0.43067437 0.8461538 0.56873219 0.6230683 0.6061874 0.3677463 0.4975376 0.5463980 0.50558497 0.62962725 0.5578947 0.6604063 0.7128205 0.8363248 8.7464e-01 0.7143162 0.7573700 0.6072859 0.6935130 0.7219984 0.6960490 0.6736111 3 0.5628827 0.4320337 5.6669e-02 5 0.4117240 0.5228517 -0.11112766 1.5764e-01 7.0720e-01 insignificant 1.00000000 1.0000e+00 insignificant 1.7207e-01 6.1370e-01 insignificant 1.0000000 1.000000 insignificant 0.01392739 0.736163 lowCoverage 1 lowCoverage 0.5628827 0.7950089 -0.26178734 5 0.4117240 0.7258624 -0.3141384 7.0115e-01 1.3821e-18 hypomethylated 1.0000e+00 2.7642e-16 hypomethylated 7.8511e-01 5.1940e-06 hypomethylated 1.0000e+00 8.6567e-04 hypomethylated -2.5227e-01 8.5997e-04 lowCoverage 1.5925e-02 lowCoverage 0.5627665 0.6576087 -0.08046328 4 0.4429048 0.6014905 -0.1585857 9.9785e-01 2.5904e-06 lowCoverage 1.0000e+00 2.8782e-04 lowCoverage 9.0804e-01 1.1539e-02 lowCoverage 1.0000e+00 3.2907e-01 lowCoverage -1.1536e-01 5.1404e-02 lowCoverage 0.6694246 lowCoverage 0.4320337 0.7950089 -0.38013114 6 0.5228517 0.7258624 -0.2030107 6.6787e-01 5.9681e-16 hypomethylated 1.0000e+00 9.9469e-14 hypomethylated 9.6018e-01 7.5197e-05 hypomethylated 1.0000e+00 1.0742e-02 hypomethylated -0.2661960 6.2277e-04 lowCoverage 1.2455e-02 lowCoverage 0.4299363 0.6576087 -1.4977e-01 4 0.4193578 0.6014905 -0.18213263 9.9967e-01 3.8829e-05 lowCoverage 1.0000e+00 3.8829e-03 lowCoverage 9.9921e-01 2.6004e-03 lowCoverage 1.0000e+00 2.0989e-01 lowCoverage -0.12928473 0.03521067 lowCoverage 0.88027 lowCoverage 0.7963964 0.6576087 0.12065386 4 0.7455943 0.6014905 0.14410387 1.9090e-04 3.3452e-01 lowCoverage 1.9090e-02 1.0000e+00 lowCoverage 1.5954e-02 8.3591e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage 0.1369113 5.1806e-02 lowCoverage 0.41444768 lowCoverage chr19 51195150 51196150 53475 CCDC61 ENSG00000104983 0.2073514 499 8 0.3731127 280 10 0.0709558 215 8 0.0245418 412 8 0.1102048 266 8 0.3026850 540 10 0.3455959 281 9 0.0149645 226 8 0.1621411 336 10 0.2849059 295 8 0.1328283 229 8 0.0669690 210 8 0.2739614 261 10 0.1932712 148 8 0.1501249 296 10 0.0168103 98 8 0.0000000 115 5 0.03733064 651 8 0.1671337 206 7 0.2319244 436 10 0.1146725 192 11 0.0636925 366 8 0.0281646 312 8 0.1575758 127 8 0.1443832 822 10 0.1666667 325 8 0.1000777 324 10 0.1785714 120 10 0.0856227 210 8 0.20299145 262 8 0.2159926 311 8 0.2268674 424 8 0.0422121 236 8 0.0506598 224 8 0.5833333 24 1 0.0281178 227 6 0.220569 137 10 0.13881499 306 9 0.0038314 522 8 0.0115551 377 8 0.2001815 500 8 0.2260652 566 8 0.2848631 388 8 0.0406345 0.0165183 0.0416262 0.0205480 0.0227935 0.0521519 0.0223858 0.02174865 0.0309152 0.01473162 0.0413878 0.0257571 0.02715970 0.0739768 0.0187732 0.01858705 0.0212588 0.0387354 0.02757511 0.0103175 0.0508630 0.00880246 0.0493149 0.01029810 0.0125204 0.0000000 0.0066519 0.0000000 0.0248723 0.02208412 0.01087996 0.0348500 0.0369731 0.0449768 0.3198318 3.0668e-02 0.1219803 0.0352499 0.0067984 0.0097308 0.0208247 0.0359093 0.0189197 8 0.0503669 0.0371737 2.4053e-02 8 0.3415525 0.1742170 0.16733548 5.9446e-07 1.0000e+00 weaklyHypermeth 0.00059446 1.0000e+00 weaklyHypermeth 5.2659e-03 1.0000e+00 weaklyHypermeth 0.6244393 1.000000 insignificant 0.01790076 0.576840 insignificant 1 insignificant 0.0503921 0.0736568 -0.01647772 8 0.3795028 0.2072441 0.1722587 6.1486e-01 1.0007e-04 weaklyHypometh 1.0000e+00 7.1482e-03 weaklyHypometh 4.7026e-01 3.5042e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -1.8944e-02 8.4101e-01 insignificant 1.0000e+00 insignificant 0.0438375 0.0246494 0.01014245 8 0.3757423 0.3440500 0.0316924 3.4761e-01 9.7451e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.6579e-01 9.8951e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.3041e-02 8.4421e-01 insignificant 1.0000000 insignificant 0.0369783 0.0736568 -0.03942124 8 0.1657967 0.2072441 -0.0414474 9.7895e-01 1.6481e-04 weaklyHypometh 1.0000e+00 1.1772e-02 weaklyHypometh 9.9789e-01 3.3016e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0368446 6.9287e-01 insignificant 1.0000e+00 insignificant 0.0352245 0.0246494 -3.6299e-03 8 0.1891200 0.3440500 -0.15492998 9.9241e-01 5.5910e-02 insignificant 1.0000e+00 7.9832e-01 insignificant 9.9934e-01 1.7037e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00485939 0.93933222 insignificant 1.00000 insignificant 0.0691164 0.0246494 0.02987358 8 0.1403595 0.3440500 -0.20369041 3.0911e-01 9.9650e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.2060e-01 9.4236e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.0319852 7.6616e-01 insignificant 1.00000000 insignificant chr19 51209350 51210350 53476 ENSG00000203348 0.0537148 1080 26 0.0146679 666 28 0.0786817 665 26 0.0319860 714 23 0.0077637 639 26 0.0704973 1307 26 0.1212248 807 28 0.0100287 783 26 0.0116612 839 26 0.0261699 1067 26 0.1119363 835 26 0.0407630 854 26 0.0051148 784 26 0.0166298 499 21 0.0212337 1020 26 0.0198570 740 26 0.0042735 110 11 0.10868908 924 20 0.0047144 626 26 0.0546087 1033 26 0.0250000 383 22 0.0486772 568 20 0.0346110 612 26 0.0111111 383 26 0.0205613 488 17 0.0916528 1138 26 0.0195658 627 23 0.0277567 454 24 0.0159108 706 26 0.05525386 1045 26 0.1137553 993 26 0.0357591 1036 26 0.0223043 616 26 0.0492989 607 26 0.0821086 1123 25 0.0379189 222 17 0.054510 281 21 0.02843093 880 26 0.0092461 1188 26 0.0857433 1131 26 0.0101563 851 26 0.0066022 824 26 0.0121456 1110 26 0.0186397 0.0109971 0.0865989 0.0127450 0.0125278 0.0388508 0.0315280 0.01058787 0.0151398 0.02966655 0.0251252 0.0307776 0.00719270 0.0213027 0.0250006 0.02431625 0.0150015 0.0140187 0.00801975 0.0207099 0.0345350 0.00654290 0.0335688 0.00753012 0.0148816 0.0209593 0.0240377 0.0198304 0.0159256 0.01653071 0.01872563 0.0388303 0.0361046 0.0706490 0.0444683 4.9496e-02 0.0594608 0.0382411 0.0103331 0.0182159 0.0113606 0.0112717 0.0131486 19 0.0240775 0.0258600 1.7244e-04 26 0.0705698 0.0648050 0.00576474 1.8760e-01 8.1940e-01 insignificant 1.00000000 1.0000e+00 insignificant 2.6528e-01 8.7542e-01 insignificant 1.0000000 1.000000 insignificant -0.00092378 0.941795 insignificant 1 insignificant 0.0240775 0.0576562 -0.03038912 26 0.0705698 0.0497896 0.0207802 9.3106e-01 1.6641e-04 weaklyHypometh 1.0000e+00 1.1094e-02 weaklyHypometh 8.6555e-01 2.5176e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -5.0512e-03 6.8676e-01 insignificant 1.0000e+00 insignificant 0.0235678 0.0125392 0.00987504 26 0.0509066 0.0791277 -0.0282211 2.0847e-02 9.9940e-01 weaklyHypermeth 3.6574e-01 1.0000e+00 insignificant 7.1765e-02 9.8826e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.5932e-02 3.9416e-01 insignificant 1.0000000 insignificant 0.0257597 0.0576717 -0.03021809 26 0.0618091 0.0512540 0.0105551 9.8364e-01 3.6794e-04 weaklyHypometh 1.0000e+00 2.2996e-02 weaklyHypometh 9.7449e-01 1.3607e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0041274 7.4963e-01 insignificant 1.0000e+00 insignificant 0.0255709 0.0125392 1.0301e-02 26 0.0552245 0.0791277 -0.02390328 2.3118e-02 6.8031e-01 weaklyHypermeth 4.6237e-01 1.0000e+00 insignificant 2.3537e-01 7.2972e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01685587 0.37477267 insignificant 1.00000 insignificant 0.0577910 0.0125392 0.04167193 26 0.0428495 0.0791277 -0.03627825 7.7943e-03 1.0000e+00 weaklyHypermeth 5.5674e-01 1.0000e+00 insignificant 8.4379e-02 9.9999e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.0209833 2.7525e-01 insignificant 1.00000000 insignificant chr19 51421450 51422450 53491 IGFL3 ENSG00000188624 0.6401973 121 6 0.8135073 140 4 0.5599405 75 2 0.8946110 149 5 0.6815200 107 6 0.6250899 153 6 0.6354128 113 4 0.7965738 69 4 0.7179094 81 4 0.8234127 37 2 0.6571662 194 6 0.2982684 46 2 0.5528846 81 4 0.7777778 8 0 0.7265406 67 4 0.4728421 51 2 0.6444444 48 2 0.70902616 142 3 0.7784188 102 4 0.5805339 103 4 0.9131054 66 4 1.0000000 5 0 0.7112500 95 4 0.6428571 44 4 0.8998535 71 5 0.8296754 183 6 0.6065873 53 4 0.6997126 56 3 0.6052207 71 4 0.87265406 182 6 0.6847925 130 4 0.8134055 132 4 0.6676822 71 4 0.3353953 149 6 0.3333333 77 3 0.0000000 3 0 0.473810 88 6 0.83340563 111 4 0.5919158 161 6 0.7936763 118 5 0.6274962 101 3 0.6886605 83 3 0.7300737 164 5 0.7664848 0.6910736 0.4718299 0.8210431 0.8292338 0.8493160 0.7101015 0.87150683 0.7132755 0.90292096 0.8276979 0.7871697 0.48379971 0.6869061 0.8415779 0.65754386 0.7098457 0.5874482 0.88477399 0.6541729 0.9447749 1.00000000 0.8019588 0.81281296 0.9264269 0.9141505 0.6889347 0.8897974 0.7056150 0.86196071 0.68999207 0.8921599 0.4884048 0.1159278 0.1138668 9.4868e-02 0.7036655 0.8603209 0.6339007 0.7352305 0.8274027 0.7654297 0.6673700 1 0.7053191 0.7950368 -9.1367e-02 4 0.7093535 0.8080361 -0.09868265 9.9988e-01 3.8664e-03 lowCoverage 1.00000000 5.2177e-01 lowCoverage 9.9979e-01 2.9255e-03 lowCoverage 1.0000000 0.417929 lowCoverage -0.10395563 0.044029 lowCoverage 1 lowCoverage 0.7053191 0.4849699 0.21761158 4 0.7093535 0.4977622 0.2115912 7.8836e-07 9.5077e-01 lowCoverage 7.4374e-06 1.0000e+00 lowCoverage 4.1110e-03 9.8857e-01 lowCoverage 3.5136e-02 1.0000e+00 lowCoverage 2.2870e-01 1.1443e-01 lowCoverage 7.0519e-01 lowCoverage 0.7053191 0.6858054 0.02210670 3 0.7093535 0.6579365 0.0514170 4.1351e-01 8.3163e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 4.0825e-01 8.2945e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -1.7061e-02 7.2490e-01 lowCoverage 1.0000000 lowCoverage 0.7950368 0.4849699 0.31178522 6 0.8080361 0.4977622 0.3102739 5.1716e-07 9.9730e-01 hypermethylated 5.6213e-06 1.0000e+00 hypermethylated 8.5938e-04 9.9964e-01 hypermethylated 9.0461e-03 1.0000e+00 hypermethylated 0.3326552 3.6938e-02 lowCoverage 2.7859e-01 lowCoverage 0.7950368 0.6858054 1.1458e-01 5 0.8080361 0.6579365 0.15009965 8.8249e-04 9.9974e-01 weaklyHypermeth 3.0431e-02 1.0000e+00 weaklyHypermeth 9.9809e-03 9.9337e-01 weaklyHypermeth 3.9924e-01 1.0000e+00 insignificant 0.08689501 0.12224939 lowCoverage 1.00000 lowCoverage 0.4849699 0.6858054 -0.18700172 5 0.4977622 0.6579365 -0.16017422 9.1776e-01 9.7510e-03 weaklyHypometh 1.0000e+00 6.3189e-02 weaklyHypometh 9.9621e-01 5.3413e-02 insignificant 1.0000000 3.4239e-01 insignificant -0.2457602 9.5942e-02 lowCoverage 0.62617114 lowCoverage chr19 51465850 51466850 53495 IGFL1 ENSG00000188293 0.5053755 232 6 0.5771433 243 6 0.6232919 70 4 0.5477754 175 6 0.3904040 48 4 0.5805518 332 6 0.4182195 91 4 0.7587719 94 4 0.5221113 81 6 0.5418160 59 4 0.4089127 230 6 0.6410256 15 1 0.6831044 56 4 0.6333333 38 4 0.5000000 75 4 0.3125000 22 1 1.0000000 1 0 0.73054274 208 5 0.6438079 250 6 0.5437321 248 6 0.4564007 41 4 0.5431078 101 4 0.5269167 102 6 0.6470557 114 6 0.3635913 99 6 0.4962092 241 6 0.4027976 192 4 0.4789116 50 4 0.3777032 209 4 0.50345684 242 6 0.5445370 270 6 0.6060126 200 6 0.5521520 161 6 0.6298487 137 6 0.5956301 73 4 0.4444444 39 5 0.703256 140 6 0.66140290 191 6 0.5686083 179 6 0.6146465 192 6 0.5582110 247 6 0.7760011 386 4 0.5240385 227 6 0.6217036 0.5743888 0.5953995 0.6096934 0.5727701 0.6563539 0.6172580 0.73468629 0.5894222 0.58686188 0.5547882 0.6774478 0.62462468 0.7220339 0.6308127 0.46186441 NA 0.6872479 0.71220146 0.6440512 0.5441705 0.54605939 0.5835414 0.68693595 0.4817057 0.6378586 0.4507752 0.6896422 0.5534127 0.54631786 0.66052605 0.6133505 0.5975004 0.5803008 0.6199287 4.3315e-01 0.6274873 0.5991489 0.7104441 0.6985448 0.6675408 0.7170363 0.6271186 4 0.5817757 0.5233745 4.9227e-02 6 0.5923435 0.5260001 0.06634342 2.8833e-03 8.8385e-01 weaklyHypermeth 0.28832967 1.0000e+00 insignificant 6.8688e-03 7.0281e-01 weaklyHypermeth 0.6244393 1.000000 insignificant 0.08256262 0.059285 lowCoverage 1 lowCoverage 0.5806326 0.6045884 -0.00334553 6 0.5244007 0.6077308 -0.0833300 2.9687e-02 1.5413e-03 weaklyHypometh 1.4994e-01 7.0061e-02 weaklyHypometh 1.5200e-01 9.5279e-02 insignificant 7.7949e-01 1.0000e+00 insignificant -1.9668e-02 7.0224e-01 lowCoverage 1.0000e+00 lowCoverage 0.5806326 0.5873274 -0.03123379 6 0.5244007 0.5641933 -0.0397926 7.5041e-01 1.2911e-01 insignificant 1.0000e+00 9.9315e-01 insignificant 9.2378e-01 2.4227e-02 weaklyHypometh 1.0000e+00 5.2666e-01 insignificant -3.0180e-02 6.0133e-01 lowCoverage 1.0000000 lowCoverage 0.5215983 0.6045884 -0.09442892 6 0.4655186 0.6077308 -0.1422122 7.3002e-01 1.2669e-05 weaklyHypometh 1.0000e+00 9.7451e-04 weaklyHypometh 5.3159e-01 1.7526e-03 weaklyHypometh 1.0000e+00 1.7526e-01 insignificant -0.1022306 4.7155e-02 weaklyHypometh 3.4032e-01 insignificant 0.5215983 0.5873274 -8.0287e-02 6 0.4655186 0.5641933 -0.09867469 9.0739e-01 6.9712e-04 weaklyHypometh 1.0000e+00 3.1687e-02 weaklyHypometh 6.0697e-01 2.0906e-04 weaklyHypometh 1.0000e+00 2.9075e-02 weaklyHypometh -0.11274273 0.06410863 insignificant 1.00000 insignificant 0.6045884 0.5873274 0.01683264 6 0.6077308 0.5641933 0.04353747 3.4140e-02 5.6697e-02 weaklyHypermeth 1.0000e+00 2.9225e-01 insignificant 5.7796e-01 5.9196e-02 insignificant 1.0000000 3.6768e-01 insignificant -0.0105121 8.6044e-01 insignificant 1.00000000 insignificant chr19 51891950 51892950 53504 ENSG00000210172,ENSG00000222204 0.1432590 680 6 0.2276676 349 6 0.1644492 474 6 0.3390490 430 6 0.0917368 432 6 0.3558374 1043 6 0.2203452 578 6 0.1259387 386 6 0.1129407 352 6 0.3634164 578 6 0.1316765 405 6 0.1169264 446 6 0.1157910 282 6 0.1025016 336 6 0.2911865 486 6 0.1002358 272 6 NA 0 0 0.29727009 1210 6 0.2288278 825 6 0.2562537 555 6 0.1956812 224 6 0.1523930 275 6 0.1251280 356 6 0.1438342 227 6 0.3994709 146 6 0.2022355 405 6 0.0723478 533 6 0.0820013 174 6 0.1344605 723 6 0.22788720 407 6 0.1555549 630 6 0.1647639 503 6 0.1370499 277 6 0.2003068 651 6 0.2013889 394 8 0.2222222 38 1 0.224929 110 6 0.24275774 495 6 0.1944012 528 6 0.0871922 499 6 0.2880019 554 6 0.2425578 1202 6 0.1453080 383 6 0.0855301 0.0596952 0.1190374 0.0889871 0.0837348 0.0840441 0.1046840 0.07871607 0.0625705 0.09502492 0.1132420 0.0778344 0.05733606 0.0902670 0.0934046 0.06595559 NA 0.1294602 0.05446111 0.0752084 0.1055352 0.08486648 0.0965317 0.12768509 0.1275712 0.0958754 0.0724441 0.0947987 0.0943865 0.10476915 0.07837811 0.1392282 0.1019416 0.1209379 0.0831149 5.3184e-02 0.1189811 0.1160637 0.0800826 0.0982888 0.0990506 0.0909461 0.1427482 6 0.1237766 0.1317391 -8.0926e-03 6 0.3433159 0.1390859 0.20423005 2.9618e-01 9.3491e-01 insignificant 1.00000000 1.0000e+00 insignificant 3.1506e-01 7.5278e-01 insignificant 1.0000000 1.000000 insignificant 0.02791361 0.401835 insignificant 1 insignificant 0.1237022 0.1504335 -0.02643629 6 0.3209325 0.2064629 0.1144696 5.9847e-01 5.6966e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 4.4194e-01 7.8167e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -5.5489e-03 8.3532e-01 insignificant 1.0000e+00 insignificant 0.1234543 0.1494471 -0.01504798 6 0.3467592 0.1571025 0.1896567 8.7465e-01 1.4286e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.6573e-01 8.4718e-02 insignificant 1.0000e+00 9.4696e-01 insignificant 7.7346e-03 8.5697e-01 insignificant 1.0000000 insignificant 0.1316649 0.1504335 -0.01832319 6 0.1410981 0.2064629 -0.0653648 9.2511e-01 1.6772e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3895e-01 7.8000e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0334625 2.6198e-01 insignificant 1.0000e+00 insignificant 0.1316935 0.1494943 -5.6062e-03 6 0.1446695 0.1683241 -0.02365453 9.6405e-01 5.7479e-02 insignificant 1.0000e+00 7.9832e-01 insignificant 9.8338e-01 1.7717e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02017903 0.65124480 insignificant 1.00000 insignificant 0.1505102 0.1495416 0.01067010 6 0.2223447 0.1812721 0.04107257 8.8779e-01 7.9611e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.5848e-01 8.1626e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.0132835 7.4224e-01 insignificant 1.00000000 insignificant chr19 51925550 51926550 53505 PRKD2 ENSG00000105287 0.9169256 155 7 0.9024267 79 7 0.8481217 123 7 0.9650350 94 7 0.8285714 26 2 0.8918367 109 7 0.8179654 56 5 0.8716895 107 6 0.8855042 94 5 0.8485645 84 7 0.8870383 173 7 0.9295918 44 5 0.7584593 206 7 NA 0 0 0.7340872 129 7 1.0000000 13 0 0.8523810 20 1 0.42504858 144 7 0.8920635 168 7 0.8875892 130 7 0.8421150 61 7 0.6261905 22 1 0.9304029 94 7 0.8131313 59 5 0.7455782 57 7 0.8664531 177 7 0.9740260 60 7 0.8630952 37 5 0.8683989 181 7 0.87599809 194 7 0.9438159 192 6 0.8677434 254 7 0.6638356 133 7 0.4566229 195 7 1.0000000 91 5 0.2636530 96 7 0.486111 26 2 0.52314721 112 7 0.7900913 137 7 0.6915237 261 7 0.8261976 70 7 0.7877834 135 7 0.7614600 52 7 0.9244947 0.9242521 0.8900989 0.9796957 0.8605263 0.8784461 0.9060340 0.89901390 0.9256321 0.84867596 0.8970261 0.9109336 0.77874414 NA 0.7293847 1.00000000 0.8125731 0.4003958 0.90029936 0.9176978 0.8395382 0.64225146 0.9570400 0.76362307 0.8188179 0.9272600 0.9728868 0.8351608 0.8771209 0.90017177 0.93065035 0.9054627 0.7504662 0.4884217 0.9356326 2.7489e-01 0.5260721 0.5791108 0.8262376 0.7089457 0.8232060 0.7967975 0.8712406 1 0.8367451 0.8861671 -4.6199e-02 7 0.8331227 0.8681255 -0.03500288 9.7570e-01 4.2245e-02 weaklyHypometh 1.00000000 1.0000e+00 insignificant 4.3735e-01 6.4123e-01 insignificant 1.0000000 1.000000 insignificant -0.00178609 0.963329 insignificant 1 insignificant 0.8367451 0.5803982 0.26635903 7 0.8331227 0.5418405 0.2912822 4.3367e-14 1.0000e+00 hypermethylated 8.3398e-13 1.0000e+00 hypermethylated 1.2966e-07 1.0000e+00 hypermethylated 3.0153e-06 1.0000e+00 hypermethylated 2.8406e-01 3.7130e-02 weaklyHypermeth 3.0434e-01 insignificant 0.8367451 0.7557252 0.07626289 7 0.8331227 0.7511828 0.0819399 1.4331e-02 9.9569e-01 weaklyHypermeth 2.7895e-01 1.0000e+00 insignificant 5.1532e-03 9.9959e-01 weaklyHypermeth 1.6623e-01 1.0000e+00 insignificant 7.8215e-02 4.2500e-02 weaklyHypermeth 0.5821924 insignificant 0.8861671 0.5803982 0.30272012 7 0.8681255 0.5418405 0.3262851 1.3839e-15 1.0000e+00 hypermethylated 3.3753e-14 1.0000e+00 hypermethylated 3.1016e-07 1.0000e+00 hypermethylated 8.6157e-06 1.0000e+00 hypermethylated 0.2858507 3.6387e-02 weaklyHypermeth 2.7776e-01 insignificant 0.8861671 0.7557252 1.2016e-01 7 0.8681255 0.7511828 0.11694274 6.4674e-07 1.0000e+00 weaklyHypermeth 8.0842e-05 1.0000e+00 weaklyHypermeth 3.4810e-03 9.9968e-01 weaklyHypermeth 1.6576e-01 1.0000e+00 insignificant 0.08000118 0.03885842 weaklyHypermeth 0.88182 insignificant 0.5803982 0.7557252 -0.18607893 7 0.5418405 0.7511828 -0.20934234 9.9992e-01 1.0837e-04 weaklyHypometh 1.0000e+00 1.1203e-03 weaklyHypometh 1.0000e+00 3.2830e-04 weaklyHypometh 1.0000000 5.4491e-03 weaklyHypometh -0.2058496 9.9682e-02 insignificant 0.63491662 insignificant chr19 51932750 51933750 53506 ENSG00000210192 0.9387466 158 5 0.8521368 60 5 0.8778355 74 5 0.9636029 164 5 0.8153021 71 5 0.8507729 172 5 0.8668459 149 5 0.8472727 73 5 0.9428571 50 5 0.8245906 78 5 0.8263889 132 5 0.7603175 48 5 0.8000000 45 5 0.9750000 65 5 0.9400000 70 5 0.7688889 25 2 NA 0 0 0.75847126 188 5 0.9697778 104 5 0.9800000 108 5 0.8533333 47 5 0.9694853 75 2 0.8970132 105 5 1.0000000 15 0 0.9641862 225 5 0.9750916 120 5 0.8060897 126 5 0.7777778 38 4 0.8205128 105 5 0.90934874 78 5 0.9647059 85 5 0.9600604 210 5 0.7741228 77 5 0.9942857 132 5 0.9166667 90 3 1.0000000 39 3 0.823529 80 5 0.72855880 140 5 0.7744353 143 5 0.9484848 141 5 0.8311688 130 5 0.9818182 120 5 0.8222222 150 5 0.9397975 0.8509574 0.8781301 0.9624658 0.9803255 0.9352167 0.8652753 0.84989429 0.9479513 0.95629807 0.9928941 0.9184570 0.95968992 0.9732558 0.9453488 0.78897502 NA 0.9076123 0.97078381 0.9829457 0.8656331 0.97261172 0.8594887 1.00000000 0.9633315 0.9740750 0.9912542 1.0000000 0.9844961 0.91169142 0.96534428 0.9626181 0.9245206 0.9944629 1.0000000 9.9221e-01 0.9881441 0.8598174 0.9283763 0.9476157 0.9605356 0.9816772 0.9865633 3 0.9247546 0.9487388 -2.3324e-02 5 0.6881301 0.7816414 -0.09351130 9.9828e-01 4.1529e-01 insignificant 1.00000000 1.0000e+00 insignificant 9.9990e-01 2.9245e-01 insignificant 1.0000000 1.000000 insignificant -0.03661756 0.205273 lowCoverage 1 lowCoverage 0.9251366 0.9462366 -0.02383279 5 0.6558627 0.5873877 0.0684749 9.8129e-01 2.3896e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9793e-01 3.0183e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -1.3444e-03 9.7936e-01 lowCoverage 1.0000e+00 lowCoverage 0.9262295 0.9590643 -0.03477515 5 0.8211789 0.7259668 0.0952120 9.4604e-01 2.4191e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.7557e-01 1.2526e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -1.0970e-04 9.9807e-01 lowCoverage 1.0000000 lowCoverage 0.9494290 0.9462366 0.00278024 5 0.7886728 0.5873877 0.2012850 9.7164e-01 4.5435e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.5073e-01 7.1044e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0352732 5.1661e-01 lowCoverage 1.0000e+00 lowCoverage 0.9501634 0.9590643 -7.2982e-03 5 0.7830902 0.7259668 0.05712338 6.9139e-01 6.6776e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.8752e-01 8.1804e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03650786 0.44948142 lowCoverage 1.00000 lowCoverage 0.9495495 0.9590044 -0.00519204 5 0.6837842 0.6868192 -0.00303500 4.4971e-01 9.4022e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.4542e-01 9.8052e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.0012347 9.8440e-01 lowCoverage 1.00000000 lowCoverage chr19 52007750 52008750 53509 SLC1A5 ENSG00000105281 0.5795490 129 5 0.5328200 208 5 0.6936906 172 6 0.4360952 134 5 0.8163802 85 6 0.7299508 215 7 0.4891457 79 4 0.5335748 177 7 0.7280040 132 6 0.7262662 116 6 0.6809913 222 6 0.4601190 62 5 0.4681510 230 6 0.7978239 69 4 0.6615175 185 6 0.6690476 42 2 0.4717172 28 3 0.67622895 163 4 0.7597284 211 5 0.6962359 140 5 0.7666446 92 6 0.4162679 95 4 0.5138877 118 6 0.6092657 65 5 0.5030921 52 3 0.7913289 214 6 0.5370041 151 7 0.6875039 67 5 0.6086964 203 6 0.68125517 262 7 0.6788745 200 5 0.5277978 187 6 0.6127964 192 6 0.5226787 130 5 0.3362500 99 3 0.1230159 26 2 0.582213 131 7 0.64070833 233 6 0.5393319 94 5 0.6915691 116 5 0.6686508 100 3 0.4940460 84 4 0.6539669 102 5 0.7134848 0.5421018 0.5777444 0.7100029 0.6811033 0.7303121 0.7366775 0.67804547 0.6830892 0.83631237 0.7992427 0.6822086 0.58897029 0.7099084 0.6602635 0.78639336 0.5059511 0.4888063 0.75242848 0.6667452 0.9040620 0.38150409 0.7809222 0.74908118 0.6594678 0.7329530 0.6128437 0.8893429 0.7756301 0.60631712 0.54086906 0.7700354 0.6192873 0.7003214 0.5448305 6.7520e-02 0.7096771 0.2989834 0.5722974 0.5440310 0.7405395 0.5360857 0.6168149 2 0.6617805 0.6758499 -2.3858e-02 6 0.5594010 0.5948469 -0.03544595 7.8049e-01 1.8914e-01 insignificant 1.00000000 1.0000e+00 insignificant 9.5180e-01 2.0098e-01 insignificant 1.0000000 1.000000 insignificant 0.02021695 0.640894 insignificant 1 insignificant 0.6620172 0.5178792 0.15167815 6 0.6060177 0.5127003 0.0933175 3.0188e-03 9.9733e-01 weaklyHypermeth 1.8296e-02 1.0000e+00 weaklyHypermeth 1.3787e-01 9.8947e-01 insignificant 7.1807e-01 1.0000e+00 insignificant 1.6074e-01 1.1206e-01 lowCoverage 7.0215e-01 lowCoverage 0.6624640 0.5987903 0.07619446 4 0.5223543 0.5550296 -0.0326753 1.8108e-01 9.3531e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 3.4743e-01 5.8248e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 2.0839e-02 6.7269e-01 lowCoverage 1.0000000 lowCoverage 0.6774383 0.5178792 0.17603704 6 0.6444175 0.5127003 0.1317173 1.9587e-03 9.7615e-01 weaklyHypermeth 1.3146e-02 1.0000e+00 weaklyHypermeth 3.4727e-02 9.1849e-01 weaklyHypermeth 2.2404e-01 1.0000e+00 insignificant 0.1405245 1.5918e-01 lowCoverage 8.8167e-01 lowCoverage 0.6756916 0.5987903 7.8410e-02 4 0.5514858 0.5550296 -0.00354377 9.3257e-02 9.2913e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 1.6057e-01 6.5087e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.00062197 0.99052904 lowCoverage 1.00000 lowCoverage 0.5199501 0.6004057 -0.13058600 4 0.4902403 0.5771992 -0.08695887 9.4852e-01 3.5054e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.8514e-01 3.3249e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage -0.1399025 1.6808e-01 lowCoverage 0.88932878 lowCoverage chr19 52069150 52070150 53513 AP2S1 ENSG00000042753 0.8151135 334 6 0.6104626 194 6 0.7006860 150 6 0.8365371 238 6 0.7219766 133 6 0.7733853 468 7 0.6901163 147 6 0.7319343 163 6 0.7320024 180 6 0.8637310 186 6 0.7745951 252 6 0.4933473 135 5 0.8018593 243 6 0.9592413 132 3 0.8055263 214 6 0.6786967 80 5 0.8580687 532 6 0.84766624 318 6 0.8443511 171 6 0.7836751 387 6 0.8478458 81 6 0.7917098 129 5 0.6766529 194 6 0.6132143 91 4 0.7265510 74 6 0.8323494 271 6 0.7419007 86 5 0.8791795 72 4 0.8559723 108 5 0.78568301 282 6 0.7764230 237 6 0.7498576 437 6 0.6149188 200 5 0.6880146 92 6 0.5030431 113 6 0.7456816 54 3 0.586880 169 6 0.72669574 249 6 0.8402670 340 6 0.8623201 302 6 0.8364295 309 6 0.7410800 278 6 0.8113506 251 6 0.8548057 0.8057113 0.7859888 0.8951639 0.7480373 0.8269855 0.7937697 0.82782956 0.7879658 0.86798234 0.7708418 0.6804993 0.85130065 0.8768417 0.8294929 0.86292153 0.9005981 0.8821688 0.84557181 0.8402297 0.8604125 0.85461024 0.7817173 0.74508982 0.7994560 0.8434857 0.7636180 0.8874204 0.8470897 0.85266962 0.85128604 0.8455694 0.7554453 0.7245903 0.5932523 8.6426e-01 0.7804771 0.8195284 0.8846048 0.8910889 0.8795183 0.8052204 0.8714498 5 0.8501181 0.8302619 4.1827e-03 6 0.7688797 0.7501882 0.01869150 5.2268e-01 6.3227e-01 insignificant 1.00000000 1.0000e+00 insignificant 8.3244e-01 3.8066e-01 insignificant 1.0000000 1.000000 insignificant -0.00696299 0.829523 insignificant 1 insignificant 0.8501181 0.7696693 0.05893587 6 0.7688797 0.6363950 0.1324847 1.3106e-04 9.9996e-01 weaklyHypermeth 1.0159e-03 1.0000e+00 weaklyHypermeth 2.3516e-03 9.9991e-01 weaklyHypermeth 2.1574e-02 1.0000e+00 weaklyHypermeth 1.2194e-01 2.2333e-02 weaklyHypermeth 2.1069e-01 insignificant 0.8501181 0.8763514 -0.03208433 6 0.7688797 0.8411714 -0.0722917 9.9686e-01 3.3117e-02 weaklyHypometh 1.0000e+00 5.0177e-01 insignificant 9.9695e-01 5.2350e-02 insignificant 1.0000e+00 7.2708e-01 insignificant -5.2141e-02 1.1375e-01 insignificant 1.0000000 insignificant 0.8302619 0.7696693 0.05537489 6 0.7501882 0.6363950 0.1137932 1.8114e-03 9.9982e-01 weaklyHypermeth 1.2239e-02 1.0000e+00 weaklyHypermeth 3.2594e-03 9.9995e-01 weaklyHypermeth 2.8591e-02 1.0000e+00 weaklyHypermeth 0.1289060 1.7582e-02 weaklyHypermeth 1.7582e-01 insignificant 0.8302619 0.8763514 -3.5657e-02 6 0.7501882 0.8411714 -0.09098318 9.9619e-01 3.7456e-02 weaklyHypometh 1.0000e+00 6.3484e-01 insignificant 9.9185e-01 6.7410e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04517782 0.16542536 insignificant 1.00000 insignificant 0.7696693 0.8763514 -0.08880947 6 0.6363950 0.8411714 -0.20477637 9.9999e-01 2.0093e-04 weaklyHypometh 1.0000e+00 1.9666e-03 weaklyHypometh 1.0000e+00 3.1205e-04 weaklyHypometh 1.0000000 5.2889e-03 weaklyHypometh -0.1740838 4.2320e-03 weaklyHypometh 0.08464018 weaklyHypometh chr19 52405450 52406450 53532 SAE1 ENSG00000142230 0.4826650 214 5 0.4931335 386 9 0.3219021 120 5 0.5963045 276 7 0.4015403 107 5 0.6890808 310 7 0.5496557 156 6 0.5905139 147 7 0.3483063 115 5 0.3860937 94 5 0.6097859 309 9 0.4229620 82 5 0.6378507 127 7 0.3627052 63 5 0.6526121 120 5 0.5127451 72 5 0.3524423 195 5 0.52120845 372 5 0.5964944 175 6 0.4495406 244 6 0.6545804 68 6 0.4117284 38 3 0.5322853 200 6 0.3096568 100 6 0.5632130 231 7 0.5392207 293 9 0.7176412 71 4 0.3740741 57 3 0.6980274 173 5 0.55943010 279 9 0.5173689 320 8 0.4840067 304 6 0.2899954 220 7 0.4086625 142 5 0.3352943 109 7 0.2217770 127 5 0.262712 232 8 0.44125874 313 8 0.3410229 310 5 0.5209637 304 8 0.3108845 279 6 0.6598235 261 5 0.3788163 191 7 0.5561702 0.5231820 0.4374975 0.6341057 0.4990404 0.6308546 0.5101888 0.55200580 0.5045665 0.57649896 0.6096942 0.5150657 0.66257878 0.5887531 0.6832031 0.44587748 0.4300206 0.5305576 0.64696687 0.5964357 0.5607754 0.51789844 0.6157982 0.52529416 0.6307587 0.6760478 0.6741458 0.5331127 0.6156753 0.66253890 0.58450795 0.6074059 0.3995052 0.3316450 0.4011185 3.9348e-01 0.3679144 0.5338457 0.5345325 0.6060676 0.5399788 0.6326744 0.5714018 5 0.5209125 0.5615023 -5.9856e-02 7 0.5909614 0.4383656 0.15259585 9.8523e-01 1.6329e-02 weaklyHypometh 1.00000000 7.2243e-01 insignificant 9.4496e-01 2.3371e-01 insignificant 1.0000000 1.000000 insignificant -0.03122561 0.485738 insignificant 1 insignificant 0.5207824 0.2460595 0.22896444 6 0.5500575 0.3224504 0.2276071 2.0081e-11 9.9683e-01 hypermethylated 3.0425e-10 1.0000e+00 hypermethylated 6.9773e-06 9.9937e-01 hypermethylated 1.0734e-04 1.0000e+00 hypermethylated 1.7226e-01 2.1267e-03 weaklyHypermeth 3.2751e-02 weaklyHypermeth 0.5206522 0.4921933 0.02339778 5 0.5000639 0.4135250 0.0865389 1.2635e-02 6.1817e-01 weaklyHypermeth 2.5529e-01 1.0000e+00 insignificant 1.5698e-01 6.1504e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.6575e-02 4.5388e-01 insignificant 1.0000000 insignificant 0.5607126 0.2458443 0.29595727 6 0.4383656 0.2931367 0.1452288 3.8070e-16 9.9693e-01 hypermethylated 1.0018e-14 1.0000e+00 hypermethylated 2.5011e-07 9.9642e-01 hypermethylated 7.1459e-06 1.0000e+00 hypermethylated 0.2034860 1.1408e-03 weaklyHypermeth 1.9668e-02 weaklyHypermeth 0.5620301 0.4921933 8.6768e-02 5 0.5357801 0.4135250 0.12225512 2.1501e-04 9.9922e-01 weaklyHypermeth 8.9596e-03 1.0000e+00 weaklyHypermeth 2.3430e-02 9.9106e-01 weaklyHypermeth 6.5082e-01 1.0000e+00 insignificant 0.08780057 0.27916330 insignificant 1.00000 insignificant 0.2458297 0.4921933 -0.22257704 5 0.3212412 0.4135250 -0.09228381 9.9607e-01 8.4634e-09 hypomethylated 1.0000e+00 1.9682e-07 hypomethylated 9.9868e-01 5.1260e-04 hypomethylated 1.0000000 7.7666e-03 hypomethylated -0.1156854 1.6705e-01 insignificant 0.88857793 insignificant chr19 52435950 52436950 53533 BBC3 ENSG00000105327 0.0544872 101 6 0.0162698 113 6 0.0000000 103 6 0.0291568 130 6 0.0000000 113 6 0.0344631 133 6 0.0107527 155 6 0.0231481 81 6 0.0000000 84 6 0.0000000 62 6 0.0142857 93 6 0.0000000 63 6 0.1369048 50 2 0.1458333 58 6 0.0072464 70 6 0.0000000 55 6 NA 0 0 0.19963370 245 6 0.0104167 114 6 0.0102588 84 5 0.0000000 73 6 0.0333333 38 4 0.1226337 115 6 0.0333333 30 3 0.0290427 224 6 0.0000000 74 6 0.1576355 217 6 0.0208333 48 5 0.0277778 70 6 0.01282051 88 6 0.0404135 112 6 0.1785714 72 2 0.0148221 158 6 0.0092593 143 6 NA 0 0 NA 0 0 0.048520 88 6 0.02901786 147 6 0.0939153 73 3 0.1677296 91 6 0.0468750 75 2 0.0304119 183 2 0.0333333 73 3 0.0474664 0.0081255 0.0000000 0.0309768 0.0000000 0.0312075 0.0215054 0.02579365 0.0000000 0.00000000 0.0087302 0.0000000 0.03174603 0.0555556 0.0144928 0.00000000 NA 0.0504681 0.00545635 0.0205177 0.0000000 0.01746032 0.0181658 0.01587302 0.0469022 0.0000000 0.0090312 0.0109127 0.0145503 0.00671551 0.02420113 0.0218254 0.0296443 0.0185185 NA NA 0.0646408 0.0221325 0.0756173 0.0228883 0.0322421 0.0608238 0.0174603 2 0.0204940 0.0249785 -2.4492e-03 6 0.0606479 0.1478306 -0.08718265 9.6059e-01 5.4076e-01 insignificant 1.00000000 1.0000e+00 insignificant 8.3057e-01 3.7970e-01 insignificant 1.0000000 1.000000 insignificant -0.01823343 0.421577 insignificant 1 insignificant 0.0205263 0.0279851 -0.00847228 6 0.0758099 0.0201687 0.0556411 9.9628e-01 5.8440e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9969e-01 5.4315e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.1061e-02 4.9762e-01 lowCoverage 1.0000e+00 lowCoverage 0.0205263 0.0545455 -0.03317855 2 0.0758099 0.1697565 -0.0939466 9.9739e-01 3.0589e-03 lowCoverage 1.0000e+00 9.8673e-02 lowCoverage 9.9924e-01 1.7015e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -3.7987e-02 2.3864e-01 lowCoverage 1.0000000 lowCoverage 0.0242005 0.0279851 -0.00288674 6 0.1431215 0.0201687 0.1229528 9.7957e-01 8.1680e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.0770e-01 2.5223e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0292949 1.6237e-01 lowCoverage 8.8725e-01 lowCoverage 0.0224913 0.0545455 -3.5954e-02 2 0.0181215 0.1697565 -0.15163500 9.9906e-01 4.5539e-02 lowCoverage 1.0000e+00 7.0060e-01 lowCoverage 9.9469e-01 1.8902e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.01975343 0.54784183 lowCoverage 1.00000 lowCoverage 0.0280899 0.0546559 -0.02886242 2 0.0230500 0.1940075 -0.17095748 9.6412e-01 4.4638e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.2562e-01 8.0191e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage -0.0490483 1.3479e-01 lowCoverage 0.78104451 lowCoverage chr19 52923150 52924150 53553 EHD2 ENSG00000024422 0.6954808 92 5 0.6203992 87 5 0.6759259 44 4 0.8135548 103 4 0.6450000 41 5 0.7170598 85 5 0.5774615 57 5 0.6720238 50 5 0.3734127 31 4 0.6133333 32 3 0.6334596 89 5 0.7666667 12 1 0.7584416 33 4 0.8000000 46 4 0.7276190 46 4 0.6880952 27 3 0.6358696 32 1 0.48171171 114 4 0.8200000 27 2 0.7496914 63 5 0.6476190 19 1 0.9166667 14 1 0.6679487 41 4 0.5675214 35 3 0.5271739 75 3 0.4681536 86 5 0.6833333 23 2 0.6933333 15 1 0.6759185 76 4 0.60322398 68 4 0.5359244 72 5 0.6357243 60 5 0.5591667 61 5 0.5662338 51 4 0.7418871 135 4 0.5000000 13 1 0.571717 62 4 0.61634921 82 4 0.6650641 101 5 0.6877778 78 5 0.6630202 106 5 0.6750000 56 3 0.6352116 99 5 0.6990232 0.6860007 0.6305115 0.7777944 0.6444444 0.7391236 0.5756681 0.61678005 0.6519400 0.60423280 0.6785313 0.8544974 0.75386518 0.7079365 0.7112623 0.72411187 0.7100873 0.6609151 0.81904762 0.7651675 0.6477702 0.77579079 0.6735857 0.64777923 0.5693582 0.6516558 0.5650794 0.7640212 0.6731241 0.62413363 0.62572362 0.6404802 0.5724868 0.5841064 0.5288486 4.8640e-01 0.6354337 0.6380448 0.6937322 0.6459259 0.6673272 0.7267647 0.6443164 0 0.6889089 0.6986301 3.4054e-02 4 0.6049127 0.5427804 0.06213230 1.3093e-01 9.9082e-01 lowCoverage 1.00000000 1.0000e+00 lowCoverage 1.7002e-01 9.9563e-01 lowCoverage 1.0000000 1.000000 lowCoverage 0.03804857 0.364301 lowCoverage 1 lowCoverage 0.6901536 0.6460396 0.10469362 4 0.7043669 0.7059403 -0.0015734 2.6910e-04 9.7898e-01 lowCoverage 1.9360e-03 1.0000e+00 lowCoverage 6.1637e-03 9.9658e-01 lowCoverage 5.0522e-02 1.0000e+00 lowCoverage 8.0701e-02 7.8315e-02 lowCoverage 5.5534e-01 lowCoverage 0.6919561 0.7068182 0.00744833 5 0.7232170 0.7146362 0.0085808 7.5391e-01 7.5459e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.5800e-01 9.5919e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.0456e-03 7.6094e-01 lowCoverage 1.0000000 lowCoverage 0.6987952 0.6442786 0.07369649 4 0.5250824 0.6219232 -0.0968408 1.5160e-02 6.7650e-01 lowCoverage 8.2839e-02 1.0000e+00 lowCoverage 7.7560e-02 7.9404e-01 lowCoverage 4.4452e-01 1.0000e+00 lowCoverage 0.0426528 3.7952e-01 lowCoverage 1.0000e+00 lowCoverage 0.7031250 0.7061503 -1.9788e-02 4 0.6351153 0.6575634 -0.02244808 9.0376e-01 2.2678e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 6.7744e-01 4.4848e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.03000298 0.39461094 lowCoverage 1.00000 lowCoverage 0.6430380 0.7068182 -0.10198087 4 0.6422437 0.7146362 -0.07239243 9.9749e-01 1.8969e-03 lowCoverage 1.0000e+00 1.4262e-02 lowCoverage 9.9895e-01 5.5165e-02 lowCoverage 1.0000000 3.4715e-01 lowCoverage -0.0726557 8.3328e-02 lowCoverage 0.56376473 lowCoverage chr19 52924850 52925850 53555 EHD2 ENSG00000024422 0.0088599 200 3 0.0666667 91 5 0.0068883 226 3 0.0093023 138 3 0.0000000 154 5 0.2545422 374 5 0.0389310 278 5 0.0035714 176 3 0.0092063 148 3 0.1298544 322 3 0.0620821 158 5 0.0040241 224 3 0.2648221 204 3 0.1478697 176 3 0.0130322 325 3 0.0000000 287 5 NA 0 0 0.26421260 270 4 0.0150265 322 3 0.0074137 274 5 0.0753247 86 5 0.2000000 46 3 0.2500000 178 3 0.1802778 100 5 0.2000000 33 3 0.0082553 170 5 0.0247168 358 5 0.0714286 58 3 0.4061582 289 3 0.20000000 153 4 0.0153846 216 5 0.0088407 281 3 0.5510741 96 5 0.5971831 216 3 0.4063492 248 5 NA 0 0 0.250000 44 5 0.50394737 126 3 0.1949944 200 3 0.1956643 209 5 0.0192308 162 3 0.0577127 387 3 0.2767094 124 3 0.0189088 0.0015291 0.0189352 0.0151483 0.0000000 0.0127053 0.0043786 0.00507864 0.0221814 0.01264808 0.0126757 0.0091743 0.02562522 0.0160148 0.0228786 0.00000000 NA 0.1192851 0.02628513 0.0127140 0.0296080 0.00458716 0.0011010 0.00018349 0.0011010 0.0126176 0.0126898 0.0000000 0.0157963 0.00091743 0.00035286 0.0145721 0.4509081 0.6131929 0.3347168 NA 0.0577217 0.4742033 0.0566586 0.0781912 0.0313162 0.0551525 0.0768545 3 0.0230150 0.0167683 9.4646e-03 3 0.1205747 0.1870689 -0.06649416 2.6640e-01 5.8591e-01 lowCoverage 1.00000000 1.0000e+00 lowCoverage 2.5614e-01 1.9801e-01 lowCoverage 1.0000000 1.000000 lowCoverage -0.06794597 0.120530 lowCoverage 1 lowCoverage 0.0230097 0.4876712 -0.46578881 3 0.1071775 0.3665224 -0.2593449 9.9152e-01 1.2042e-28 lowCoverage 1.0000e+00 1.2042e-25 lowCoverage 9.9973e-01 1.5856e-06 lowCoverage 1.0000e+00 3.1712e-04 lowCoverage -3.9296e-01 1.7671e-03 lowCoverage 2.8969e-02 lowCoverage 0.0230097 0.0674677 -0.04277233 3 0.1071775 0.3493455 -0.2421680 9.9967e-01 2.6185e-04 lowCoverage 1.0000e+00 1.6366e-02 lowCoverage 9.9993e-01 1.8672e-03 lowCoverage 1.0000e+00 8.8916e-02 lowCoverage -8.0109e-02 1.8044e-01 lowCoverage 1.0000000 lowCoverage 0.0167683 0.4876374 -0.47187910 5 0.1870689 0.3498377 -0.1627688 8.9699e-01 3.4538e-19 hypomethylated 1.0000e+00 1.1513e-16 hypomethylated 9.3277e-01 2.3314e-05 hypomethylated 1.0000e+00 3.8857e-03 hypomethylated -0.3250119 2.7480e-03 lowCoverage 4.1636e-02 lowCoverage 0.0167683 0.0666050 -5.2820e-02 3 0.1870689 0.2680137 -0.08094478 9.9988e-01 2.2802e-08 lowCoverage 1.0000e+00 4.5603e-06 lowCoverage 9.9957e-01 6.8223e-03 lowCoverage 1.0000e+00 2.9845e-01 lowCoverage -0.01216342 0.84310579 lowCoverage 1.00000 lowCoverage 0.4876712 0.0674677 0.41089396 3 0.3665224 0.3493455 0.01717692 5.3233e-06 1.0000e+00 lowCoverage 1.3308e-03 1.0000e+00 lowCoverage 4.5418e-02 9.9763e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage 0.3128484 4.4083e-03 lowCoverage 0.08477550 lowCoverage chr19 53400350 53401350 53557 ENSG00000196223 0.5915449 181 6 0.5282828 127 6 0.5351307 101 6 0.6102730 135 6 0.6892806 63 6 0.5555450 240 6 0.6017085 107 6 0.5055429 126 6 0.5803953 84 6 0.5443991 88 6 0.6783086 152 6 0.6365079 89 6 0.5847763 122 6 NA 0 0 0.5120133 138 6 0.4339286 62 6 0.6353175 84 6 0.57580733 135 6 0.5082322 158 6 0.5771991 228 6 0.5306878 39 6 0.4702381 86 6 0.6041880 114 6 0.4901515 46 5 0.6500000 32 5 0.5383344 201 6 0.5497558 71 6 0.5059524 33 3 0.5515584 98 6 0.56947153 175 6 0.5508822 177 6 0.5661143 283 6 0.5001684 99 6 0.5894737 93 6 0.5053744 116 6 0.4785354 73 6 0.603340 64 5 0.46996100 141 6 0.5672028 195 6 0.6577426 214 6 0.5920314 115 6 0.6038778 230 6 0.6033633 168 6 0.6141771 0.5585305 0.5546397 0.6387085 0.7147875 0.5803783 0.6261787 0.53195828 0.6008957 0.59291792 0.7049911 0.6732333 0.61349799 NA 0.5358695 0.45645793 0.6714286 0.6108613 0.54842378 0.6000848 0.5591795 0.49396608 0.6367738 0.51884599 0.6748858 0.5702656 0.5854567 0.5487606 0.5848841 0.60168255 0.58916418 0.5806254 0.5271251 0.6191781 0.5188455 4.9697e-01 0.6340509 0.5027012 0.5927617 0.6865192 0.6366250 0.6262514 0.6254324 6 0.5785124 0.5719557 1.6927e-02 6 0.5713966 0.5538306 0.01756601 1.4405e-01 8.1162e-01 insignificant 1.00000000 1.0000e+00 insignificant 1.0914e-01 7.6820e-01 insignificant 1.0000000 1.000000 insignificant 0.02474109 0.229807 insignificant 1 insignificant 0.5785124 0.5290102 0.05845549 6 0.5713966 0.5159336 0.0554630 5.5574e-03 9.9884e-01 weaklyHypermeth 3.2310e-02 1.0000e+00 weaklyHypermeth 4.0331e-02 9.9466e-01 weaklyHypermeth 2.5207e-01 1.0000e+00 insignificant 4.8377e-02 1.1234e-01 insignificant 7.0215e-01 insignificant 0.5785124 0.6041215 -0.03274453 6 0.5713966 0.6042397 -0.0328431 9.9109e-01 1.2329e-01 insignificant 1.0000e+00 9.8630e-01 insignificant 9.8963e-01 1.0673e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -3.1991e-02 1.4681e-01 insignificant 1.0000000 insignificant 0.5719557 0.5290102 0.04110179 6 0.5538306 0.5159336 0.0378970 3.0357e-02 9.6670e-01 weaklyHypermeth 1.5811e-01 1.0000e+00 insignificant 1.6082e-01 8.4569e-01 insignificant 7.9223e-01 1.0000e+00 insignificant 0.0236358 4.1000e-01 insignificant 1.0000e+00 insignificant 0.5719557 0.6041215 -4.9393e-02 6 0.5538306 0.6042397 -0.05040909 9.8941e-01 2.9247e-02 weaklyHypometh 1.0000e+00 5.5184e-01 insignificant 9.9538e-01 2.9519e-02 weaklyHypometh 1.0000e+00 7.1997e-01 insignificant -0.05673240 0.01762592 weaklyHypometh 0.68667 insignificant 0.5290102 0.6041215 -0.09157460 6 0.5159336 0.6042397 -0.08830608 9.9984e-01 3.6817e-03 weaklyHypometh 1.0000e+00 2.5927e-02 weaklyHypometh 9.9975e-01 1.4877e-02 weaklyHypometh 1.0000000 1.2295e-01 insignificant -0.0803682 1.9506e-02 weaklyHypometh 0.21916958 insignificant chr19 53526350 53527350 53559 EMP3 ENSG00000142227 0.8522546 409 5 0.8930622 382 5 0.8130303 182 5 0.8837139 260 5 0.9034161 76 5 0.8738774 432 5 0.8714617 249 5 0.7975024 252 5 0.8181175 160 5 0.8572304 171 5 0.8011844 328 5 0.8130736 82 5 0.9185179 198 5 1.0000000 24 2 0.9011555 160 5 0.9333333 32 5 0.8447252 2630 5 0.86318909 236 5 0.8844345 207 5 0.8701517 386 5 0.9265873 87 5 0.7910287 76 5 0.8442020 212 5 0.6999689 75 4 0.8601349 94 5 0.8694376 502 5 0.6835885 94 4 0.7700699 69 5 0.7753411 226 5 0.89488972 498 5 0.8920344 388 5 0.8945915 437 5 0.8030494 267 5 0.7936837 220 5 0.7682594 185 2 0.6989744 69 4 0.828571 99 5 0.84132579 438 5 0.9109773 323 5 0.9251575 399 5 0.9493734 342 5 0.8313080 291 5 0.9446731 310 5 0.8659326 0.9028334 0.7988482 0.9122680 0.8650019 0.8695381 0.8738531 0.81034096 0.8089082 0.87241975 0.8305032 0.8678859 0.92141648 0.9460458 0.8912759 0.94727891 0.8483502 0.8851814 0.89544461 0.8752763 0.9313249 0.75997624 0.8632430 0.76661068 0.8726271 0.8798522 0.7735776 0.8068836 0.7639017 0.89724748 0.89234321 0.9043636 0.7807929 0.7208644 0.7552226 6.8367e-01 0.8613703 0.8504288 0.9213501 0.9341611 0.9395967 0.8175891 0.9326999 4 0.8744166 0.8730964 -8.5596e-05 5 0.8702263 0.8650447 0.00518158 2.7520e-02 1.4650e-02 weaklyHypometh 1.00000000 7.2243e-01 insignificant 1.3845e-01 4.1586e-01 insignificant 1.0000000 1.000000 insignificant 0.04451537 0.101216 lowCoverage 1 lowCoverage 0.8744166 0.8051643 0.06737516 5 0.8702263 0.8152975 0.0549289 8.6400e-04 9.8168e-01 weaklyHypermeth 5.7987e-03 1.0000e+00 weaklyHypermeth 1.5443e-02 7.8703e-01 weaklyHypermeth 1.1110e-01 1.0000e+00 insignificant 8.0694e-02 9.0579e-03 lowCoverage 1.0532e-01 lowCoverage 0.8744166 0.9267267 -0.05177772 5 0.8702263 0.9263400 -0.0561137 9.9993e-01 4.5536e-05 weaklyHypometh 1.0000e+00 3.7947e-03 weaklyHypometh 9.9753e-01 8.1968e-04 weaklyHypometh 1.0000e+00 5.4645e-02 weaklyHypometh -4.2626e-02 1.2454e-01 lowCoverage 1.0000000 lowCoverage 0.8730964 0.8051643 0.06040385 5 0.8650447 0.8152975 0.0497473 2.6750e-03 9.9447e-01 weaklyHypermeth 1.7258e-02 1.0000e+00 weaklyHypermeth 1.0615e-01 6.4608e-01 insignificant 5.7377e-01 1.0000e+00 insignificant 0.0361789 2.6352e-01 lowCoverage 1.0000e+00 lowCoverage 0.8730964 0.9267267 -5.4468e-02 5 0.8650447 0.9263400 -0.06129523 9.9917e-01 2.6279e-04 weaklyHypometh 1.0000e+00 1.7520e-02 weaklyHypometh 9.9988e-01 2.3946e-04 weaklyHypometh 1.0000e+00 2.9075e-02 weaklyHypometh -0.08714165 0.01640144 lowCoverage 0.68667 lowCoverage 0.8051643 0.9267267 -0.12037178 5 0.8152975 0.9263400 -0.11104251 1.0000e+00 5.1909e-05 weaklyHypometh 1.0000e+00 5.9665e-04 weaklyHypometh 9.9834e-01 7.0069e-04 weaklyHypometh 1.0000000 1.0155e-02 weaklyHypometh -0.1233205 2.6737e-03 lowCoverage 0.06217822 lowCoverage chr19 53593050 53594050 53560 GRIN2D ENSG00000105464 0.0021945 1926 39 0.0557191 808 38 0.0331052 1030 39 0.0032048 1870 39 0.0028697 894 39 0.0240832 2081 39 0.0328923 1225 39 0.0033043 800 39 0.0265068 984 39 0.0106741 1090 39 0.0129043 1052 39 0.0113493 1039 39 0.0335162 1035 39 0.0589619 614 30 0.0535104 1234 39 0.0084908 998 39 0.0157622 537 26 0.00604859 3794 39 0.0349565 1037 38 0.0652344 1627 39 0.0238354 418 34 0.0085224 1227 38 0.0107230 793 39 0.0109735 486 36 0.0884369 2672 38 0.0022538 1365 39 0.0571048 906 34 0.0101496 519 38 0.0097029 1107 39 0.03025309 1394 39 0.0287705 1160 39 0.0110135 1938 39 0.0050301 786 39 0.0128469 1164 39 0.0938447 701 22 0.0175052 796 34 0.089558 654 38 0.04515109 1354 39 0.0194713 1977 39 0.0121846 1971 39 0.0084972 1667 39 0.0098958 2291 39 0.0228334 1655 39 0.0024055 0.0030228 0.0348776 0.0039050 0.0027518 0.0261581 0.0132777 0.00533431 0.0036586 0.00909442 0.0159302 0.0125696 0.01415979 0.0122802 0.0108057 0.01172954 0.0089567 0.0067938 0.01176805 0.0259704 0.0116271 0.00772191 0.0153807 0.01343700 0.0120145 0.0028254 0.0127461 0.0142609 0.0104374 0.00474431 0.00447625 0.0101985 0.0069849 0.0163527 0.0184522 1.8334e-02 0.0181686 0.0440386 0.0203811 0.0126089 0.0095684 0.0102950 0.0252028 36 0.0128650 0.0088014 4.0801e-03 39 0.0599969 0.0655729 -0.00557598 2.1720e-01 9.9988e-01 insignificant 1.00000000 1.0000e+00 insignificant 5.7746e-01 1.0000e+00 insignificant 1.0000000 1.000000 insignificant 0.00045281 0.958457 insignificant 1 insignificant 0.0127125 0.0240147 -0.01085101 39 0.0629659 0.1081753 -0.0452094 9.9668e-01 5.2330e-04 weaklyHypometh 1.0000e+00 2.9072e-02 weaklyHypometh 9.8593e-01 1.0004e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -1.9225e-02 2.9512e-01 insignificant 1.0000e+00 insignificant 0.0124243 0.0146428 -0.00331606 39 0.0128651 0.0143004 -0.0014353 9.1090e-01 1.5410e-10 weaklyHypometh 1.0000e+00 3.8525e-08 weaklyHypometh 9.9491e-01 8.6101e-10 weaklyHypometh 1.0000e+00 8.6101e-07 weaklyHypometh 1.0188e-02 7.1974e-02 insignificant 0.8178892 insignificant 0.0086689 0.0238620 -0.01517175 39 0.0479913 0.0981944 -0.0502030 9.9993e-01 1.5805e-06 weaklyHypometh 1.0000e+00 1.5805e-04 weaklyHypometh 9.9968e-01 1.2684e-02 weaklyHypometh 1.0000e+00 9.7827e-01 insignificant -0.0196777 3.0076e-01 insignificant 1.0000e+00 insignificant 0.0082597 0.0146428 -7.9410e-03 39 0.0091693 0.0143004 -0.00513111 9.9023e-01 2.5587e-13 weaklyHypometh 1.0000e+00 1.2793e-10 weaklyHypometh 9.9997e-01 7.0344e-11 weaklyHypometh 1.0000e+00 7.0344e-08 weaklyHypometh 0.00973514 0.23113966 insignificant 1.00000 insignificant 0.0226311 0.0146428 0.00673409 39 0.0218019 0.0143004 0.00750152 8.0257e-01 2.7321e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9981e-01 9.3141e-02 insignificant 1.0000000 5.2326e-01 insignificant 0.0294129 1.2799e-01 insignificant 0.76643417 insignificant chr19 53686450 53687450 53563 CYTH2 ENSG00000105443 0.0777093 287 9 0.0470920 261 5 0.0328947 174 8 0.1094190 392 8 0.0151515 128 8 0.1473810 452 9 0.2075712 285 8 0.0049020 160 8 0.0255556 175 8 0.0755291 78 8 0.0190674 242 8 0.0211878 117 9 0.0606061 78 8 0.0070954 92 7 0.0446429 99 8 0.0708450 90 8 1.0000000 1 0 0.18573487 480 9 0.1250000 115 4 0.0881529 256 8 0.0069444 128 4 0.1458333 43 5 0.0870370 148 6 0.0038610 125 4 0.0527397 372 3 0.0183531 305 8 0.0512821 195 7 0.1172727 81 6 0.0563634 142 4 0.01068913 238 8 0.0059948 321 8 0.0621648 325 8 0.0427350 128 4 0.0385822 177 8 0.0727273 49 4 0.0543235 176 3 0.133449 180 6 0.27859100 265 8 0.0344301 407 11 0.0296499 378 9 0.0890284 318 9 0.1015625 135 3 0.1423479 290 8 0.0379603 0.0084070 0.0146199 0.0179304 0.0092593 0.0089226 0.0358132 0.01128936 0.0293490 0.06499920 0.0173920 0.0274244 0.00420875 0.0288300 0.0221861 0.04079544 NA 0.0380811 0.00119967 0.0153842 0.0034722 0.00420875 0.0454345 0.00518701 0.0089941 0.0113564 0.0092593 0.0076768 0.0154133 0.00667134 0.01133819 0.0277856 0.0842614 0.0865678 0.1122698 6.9534e-02 0.2558697 0.0760576 0.0155563 0.0193493 0.0324647 0.0136785 0.0370703 3 0.0308783 0.0239768 7.8890e-03 7 0.0653115 0.0309136 0.03439795 9.0592e-01 1.0000e+00 insignificant 1.00000000 1.0000e+00 insignificant 8.4847e-01 1.0000e+00 insignificant 1.0000000 1.000000 insignificant 0.06673225 0.195897 insignificant 1 insignificant 0.0312341 0.1149897 -0.08441918 7 0.1075879 0.1605924 -0.0530045 9.1542e-01 5.4319e-05 weaklyHypometh 1.0000e+00 4.5266e-03 weaklyHypometh 9.4384e-01 5.8774e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 1.4876e-02 8.1049e-01 insignificant 1.0000e+00 insignificant 0.0306484 0.0314342 0.00074734 8 0.0447906 0.0645474 -0.0197568 9.7911e-01 9.9173e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9780e-01 9.0368e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.8873e-02 4.6796e-01 insignificant 1.0000000 insignificant 0.0244408 0.1153450 -0.08990242 7 0.0620194 0.1605924 -0.0985730 9.9899e-01 9.3466e-04 weaklyHypometh 1.0000e+00 5.1925e-02 weaklyHypometh 9.9936e-01 3.2217e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0518567 2.4129e-01 insignificant 1.0000e+00 insignificant 0.0243701 0.0314136 -7.9911e-03 7 0.0456985 0.0611501 -0.01545163 9.9958e-01 8.1536e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.0000e+00 5.6782e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02785913 0.30251006 insignificant 1.00000 insignificant 0.1144330 0.0309211 0.07943877 7 0.0960226 0.0509117 0.04511082 2.3444e-01 9.8741e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.1738e-01 9.9796e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.0239976 5.9561e-01 insignificant 1.00000000 insignificant chr19 53738650 53739650 53564 LMTK3 ENSG00000142235 0.8504938 157 8 0.6439263 172 8 0.6508858 128 8 0.7320706 167 5 0.7233526 82 9 0.7382144 202 9 0.6901746 96 8 0.6497334 97 8 0.6377636 91 6 0.7619909 104 8 0.7735935 137 6 0.7518519 58 6 0.7580299 106 7 0.8908425 51 4 0.8154321 114 8 0.7285256 68 6 0.7858220 40 3 0.70502381 173 9 0.9048944 131 7 0.8010509 179 8 0.6174907 64 4 0.6575268 113 8 0.7596734 147 10 0.6975950 78 5 0.8969632 102 6 0.7911381 223 9 0.9286596 118 8 0.6057239 31 2 0.7110306 78 6 0.78888889 210 10 0.7816486 186 9 0.6777952 220 7 0.5936677 164 9 0.4715107 91 8 0.1340741 96 4 0.5212121 59 5 0.600823 108 7 0.46720682 155 9 0.8818073 201 8 0.8021212 200 8 0.6906250 102 6 0.6183986 213 6 0.7645950 158 7 0.8185324 0.5923777 0.7063312 0.8231482 0.6659366 0.7917809 0.8249222 0.61082818 0.6448821 0.73110203 0.7709669 0.6846847 0.83884523 0.7515217 0.8169820 0.69861400 0.7610650 0.7434517 0.85937974 0.8518105 0.7719614 0.69136686 0.7312425 0.83932504 0.8324331 0.8205217 0.8680395 0.7269451 0.7128907 0.81295796 0.81562671 0.7976179 0.6636017 0.5643048 0.2421189 4.4961e-01 0.5888883 0.5228571 0.9154687 0.8219459 0.8121321 0.7562318 0.7591680 3 0.7564811 0.7808917 -2.0799e-02 8 0.7083541 0.6898415 0.01851258 8.8525e-01 3.2576e-01 insignificant 1.00000000 1.0000e+00 insignificant 8.2560e-01 4.3901e-01 insignificant 1.0000000 1.000000 insignificant 0.00683912 0.843036 insignificant 1 insignificant 0.7563776 0.4814264 0.28102532 8 0.6818408 0.4397876 0.2420533 1.0148e-11 1.0000e+00 hypermethylated 1.5856e-10 1.0000e+00 hypermethylated 3.3698e-07 1.0000e+00 hypermethylated 6.7395e-06 1.0000e+00 hypermethylated 2.8493e-01 8.6613e-03 weaklyHypermeth 1.0311e-01 insignificant 0.7570213 0.8077803 -0.03075851 6 0.7500249 0.7734767 -0.0234518 2.0219e-01 3.4471e-02 weaklyHypometh 1.0000e+00 5.0692e-01 insignificant 4.3293e-01 6.6082e-02 insignificant 1.0000e+00 8.1206e-01 insignificant -1.8258e-03 9.7139e-01 insignificant 1.0000000 insignificant 0.7817486 0.4814264 0.30369650 8 0.7222514 0.4397876 0.2824638 1.8525e-13 1.0000e+00 hypermethylated 3.8594e-12 1.0000e+00 hypermethylated 3.1621e-08 1.0000e+00 hypermethylated 1.0904e-06 1.0000e+00 hypermethylated 0.2780954 8.5166e-03 weaklyHypermeth 1.0139e-01 insignificant 0.7831094 0.8077803 -1.0463e-02 6 0.7694765 0.7734767 -0.00400021 2.4848e-01 6.0556e-02 insignificant 1.0000e+00 8.1832e-01 insignificant 4.4317e-01 1.0918e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00866491 0.87674883 insignificant 1.00000 insignificant 0.4821429 0.8077803 -0.28980362 6 0.4837663 0.7734767 -0.28971036 9.9947e-01 1.2135e-07 hypomethylated 1.0000e+00 2.3336e-06 hypomethylated 9.9991e-01 1.5880e-05 hypomethylated 1.0000000 4.5332e-04 hypomethylated -0.2867603 8.5210e-03 weaklyHypometh 0.13804252 insignificant chr19 53818850 53819850 53566 SPHK2 ENSG00000063176 0.0111111 357 15 0.0039683 314 17 0.0039773 584 18 0.0067466 364 14 0.0066402 227 11 0.0138126 589 18 0.0175529 458 15 0.0098430 347 15 0.0065873 424 15 0.0019048 433 15 0.0105578 436 15 0.0130745 425 15 0.0145124 378 15 0.0098039 76 6 0.0139539 430 15 0.0000000 282 15 0.0000000 326 15 0.00000000 299 13 0.0099715 256 14 0.0277778 499 18 0.0437831 140 14 0.0296296 292 14 0.0123163 413 18 0.0303175 166 15 0.0666667 233 13 0.0018519 519 18 0.0221532 215 14 0.0464496 157 9 0.0242218 295 15 0.00401214 586 18 0.0065546 566 18 0.0250000 777 18 0.0179558 266 18 0.0250529 251 13 0.0246355 315 12 0.0222222 204 10 0.093651 139 10 0.00000000 383 17 0.0000000 399 15 0.0166667 388 18 0.0200617 285 12 0.0370370 430 14 0.0554525 358 15 0.0054745 0.0000000 0.0022043 0.0136875 0.0077700 0.0085977 0.0220983 0.00992575 0.0068865 0.00078206 0.0165425 0.0187306 0.02031604 0.0110730 0.0112228 0.00000000 0.0000000 0.0000000 0.01524580 0.0136861 0.0411598 0.01216545 0.0143620 0.02921880 0.0273723 0.0009124 0.0162647 0.0305045 0.0265310 0.00576414 0.00670700 0.0123175 0.0107690 0.0302594 0.0187436 9.1241e-03 0.0560914 0.0000000 0.0000000 0.0091241 0.0131792 0.0195864 0.0407144 10 0.0082623 0.0144529 -7.5551e-03 15 0.0072704 0.0146809 -0.00741056 9.6089e-01 4.0417e-01 insignificant 1.00000000 1.0000e+00 insignificant 9.8787e-01 2.6595e-01 insignificant 1.0000000 1.000000 insignificant -0.01698989 0.011535 weaklyHypometh 1 insignificant 0.0082623 0.0237484 -0.01577254 15 0.0072704 0.0180621 -0.0107917 9.9597e-01 4.1448e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9867e-01 4.7342e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -2.1496e-02 1.6449e-01 insignificant 9.1383e-01 insignificant 0.0082623 0.0102151 -0.00664600 15 0.0072704 0.0243404 -0.0170700 9.4688e-01 2.0925e-02 weaklyHypometh 1.0000e+00 3.8751e-01 insignificant 9.7484e-01 1.9294e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -1.6754e-02 1.5151e-01 insignificant 1.0000000 insignificant 0.0144529 0.0237484 -0.00560110 18 0.0146809 0.0180621 -0.0033811 9.9826e-01 9.3574e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9512e-01 9.3963e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0045065 7.6203e-01 insignificant 1.0000e+00 insignificant 0.0144529 0.0102151 -3.5371e-03 15 0.0146809 0.0243404 -0.00965948 9.9412e-01 6.7899e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8610e-01 8.5152e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00023609 0.98342700 insignificant 1.00000 insignificant 0.0237484 0.0102151 -0.00105539 15 0.0180621 0.0243404 -0.00627835 9.5747e-01 8.0594e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.1456e-01 9.1273e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.0047426 7.7686e-01 insignificant 1.00000000 insignificant chr19 53933650 53934650 53570 MAMSTR ENSG00000176909 0.0517877 1814 61 0.0468006 2175 57 0.0297334 3060 58 0.0546125 1364 44 0.0161673 1863 51 0.1565716 2415 67 0.0225785 2721 53 0.0640085 1879 53 0.0303867 2898 53 0.0141193 3437 53 0.0333651 2378 53 0.0104709 3067 53 0.0194257 2590 53 0.0165346 1055 26 0.0109843 3323 53 0.0163687 2611 53 0.0508401 2040 51 0.05044775 1933 61 0.0752182 1725 63 0.1149714 1593 66 0.0243169 615 42 0.0552225 972 34 0.0607505 1799 58 0.0205335 748 49 0.0194591 818 33 0.0432416 3063 68 0.0146662 981 48 0.0211471 1173 51 0.0137359 1773 53 0.05783537 3075 58 0.0350114 2659 64 0.0381943 2246 66 0.0456154 1988 56 0.0418955 1618 53 0.0579290 1466 46 0.0408876 760 47 0.069389 651 44 0.04520444 2014 58 0.0418128 1995 61 0.0348973 1660 61 0.0484404 1305 46 0.0553243 1869 48 0.0233140 1534 60 0.0093487 0.0148641 0.0130788 0.0093633 0.0160097 0.0254518 0.0296284 0.01231090 0.0122674 0.01612201 0.0210788 0.0106885 0.01481274 0.0170818 0.0135411 0.01763669 0.0120284 0.0084645 0.01352017 0.0194672 0.0227118 0.02219263 0.0245091 0.01743751 0.0174763 0.0084651 0.0119999 0.0205026 0.0165006 0.01022122 0.00710858 0.0177779 0.0250512 0.0295750 0.1035398 2.1314e-02 0.0555973 0.0112829 0.0095649 0.0054875 0.0206720 0.0078702 0.0193001 33 0.0200584 0.0251632 2.2866e-03 58 0.1141386 0.0602629 0.05387574 1.8776e-01 9.9999e-01 insignificant 1.00000000 1.0000e+00 insignificant 1.2434e-01 1.0000e+00 insignificant 1.0000000 1.000000 insignificant 0.01059345 0.283772 insignificant 1 insignificant 0.0192287 0.0443790 -0.01943033 66 0.0814401 0.0765622 0.0048779 9.9296e-01 1.7067e-03 weaklyHypometh 1.0000e+00 7.4203e-02 weaklyHypometh 9.8692e-01 9.5968e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -5.8839e-03 5.4152e-01 insignificant 1.0000e+00 insignificant 0.0200449 0.0113650 0.00396980 57 0.1350563 0.0807325 0.0543238 1.0392e-02 9.9620e-01 weaklyHypermeth 2.3619e-01 1.0000e+00 insignificant 1.6546e-01 1.0000e+00 insignificant 1.0000e+00 1.0000e+00 insignificant 3.5119e-03 7.2877e-01 insignificant 1.0000000 insignificant 0.0240310 0.0442561 -0.01994562 58 0.0405135 0.0637459 -0.0232325 1.0000e+00 2.8550e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.0000e+00 9.2401e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0164773 2.8269e-02 weaklyHypometh 2.3957e-01 insignificant 0.0250214 0.0113827 2.3194e-03 49 0.0624515 0.0881684 -0.02571692 9.0539e-01 9.8754e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9017e-01 9.9990e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00708156 0.36235953 insignificant 1.00000 insignificant 0.0442321 0.0107927 0.01884870 57 0.0756346 0.0472712 0.02836337 1.7195e-01 1.0000e+00 insignificant 1.0000e+00 1.0000e+00 insignificant 7.9898e-01 1.0000e+00 insignificant 1.0000000 1.0000e+00 insignificant 0.0093958 2.2581e-01 insignificant 1.00000000 insignificant chr19 54001050 54002050 53572 ENSG00000206758 0.6466579 139 3 0.2491497 83 7 0.4402273 51 3 0.8095238 76 1 0.7792208 35 1 0.6041977 176 7 0.3154762 49 3 0.5674667 82 7 0.3015873 36 3 0.7033333 27 1 0.7326226 169 7 1.0000000 3 0 0.8300699 41 3 0.5606061 34 3 0.5000000 37 3 0.0000000 20 2 NA 0 0 0.60810811 167 1 0.5353729 86 6 0.5762038 125 6 0.4157407 39 3 0.3787879 15 1 0.6268116 53 1 0.6468531 43 3 0.8765432 31 1 0.5876367 154 7 0.5237388 94 3 0.5416667 17 1 0.5899755 100 6 0.53278819 127 7 0.6186456 143 7 0.5414512 169 7 0.5693878 56 4 0.6481874 123 6 0.9285714 22 3 0.0000000 5 0 0.590236 58 3 0.66574925 216 7 0.6523297 121 3 0.5909903 132 4 0.5809524 116 2 0.8666667 15 1 0.6560606 92 4 0.7541932 0.5164835 0.6881119 0.6593407 0.7919580 0.7516702 0.7371795 0.83179225 0.8021978 0.80769231 0.8353637 0.8438419 0.67482517 0.8951049 0.7264957 0.67073727 NA 0.7806653 0.70769231 0.6862745 0.9538462 0.48951049 0.5852843 0.69284562 0.8945869 0.7257017 0.6792358 0.7179487 0.6322029 0.62863825 0.62881563 0.7997901 0.5274725 0.3799058 0.6534845 0.0000e+00 0.8377622 0.6672370 0.6699752 0.7137862 0.6959707 0.6934524 0.7103730 0 0.7005571 0.6304569 3.1826e-03 3 0.5699332 0.6358933 -0.06596014 7.5370e-01 3.6773e-01 lowCoverage 1.00000000 1.0000e+00 lowCoverage 3.3686e-01 8.2067e-01 lowCoverage 1.0000000 1.000000 lowCoverage -0.00708008 0.913832 lowCoverage 1 lowCoverage 0.7005571 0.5979167 0.03760826 3 0.5699332 0.6434269 -0.0734938 2.1243e-01 3.8617e-02 lowCoverage 8.8882e-01 1.0000e+00 lowCoverage 5.5321e-01 4.7350e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -7.1540e-04 9.9596e-01 lowCoverage 1.0000e+00 lowCoverage 0.7005571 0.8046218 -0.02678111 2 0.5699332 0.6031797 -0.0332465 5.7542e-01 7.2595e-02 lowCoverage 1.0000e+00 7.5747e-01 lowCoverage 6.9154e-01 2.1814e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -1.0309e-01 1.8924e-01 lowCoverage 1.0000000 lowCoverage 0.6304569 0.5979167 0.01125160 6 0.6358933 0.6434269 -0.0075336 4.3051e-01 2.0625e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.6135e-01 3.8009e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0063647 9.6262e-01 lowCoverage 1.0000e+00 lowCoverage 0.6304569 0.8046218 -3.9330e-02 2 0.6358933 0.6031797 0.03271364 4.9966e-01 8.7315e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 5.1808e-01 9.4347e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.09601333 0.16526793 lowCoverage 1.00000 lowCoverage 0.5979167 0.8046218 -0.09710764 2 0.6434269 0.6031797 0.04024727 2.7393e-01 4.8971e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 6.4221e-01 6.6394e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage -0.1023780 4.7532e-01 lowCoverage 1.00000000 lowCoverage chr19 54123350 54124350 53577 NUCB1 ENSG00000104805 0.7927894 174 5 0.7753119 68 4 0.6576847 80 5 0.8172308 97 5 0.7314286 29 5 0.8043134 161 5 0.7357190 79 5 0.6715686 52 4 0.5947552 44 4 0.8657343 53 4 0.8113855 147 5 0.7782662 57 5 0.6975381 73 5 NA 0 0 0.7647619 64 5 0.7727273 52 5 0.7398693 61 5 0.79140787 89 5 0.9401515 47 5 0.7790646 125 5 0.9028571 29 4 0.9287879 31 2 0.8236296 101 5 0.9500000 32 3 1.0000000 28 4 0.7062907 113 5 0.8733333 31 3 0.8166667 24 3 0.7783422 67 5 0.82717210 94 5 0.7763348 103 5 0.7969853 191 5 0.6060150 70 5 0.7113636 56 5 0.7610645 105 5 0.9017857 59 5 0.666234 32 2 0.75895470 97 5 0.8548803 185 5 0.8346320 172 5 0.7435294 135 5 0.7904014 155 5 0.7802808 175 5 0.8529628 0.7998672 0.6655557 0.8510407 0.6643858 0.7929031 0.7973925 0.76861921 0.6912646 0.85755421 0.8563208 0.7813587 0.78781821 NA 0.7947579 0.80381971 0.7742626 0.8249173 0.93019481 0.7680141 0.8873950 0.89457601 0.8594709 0.92647059 1.0000000 0.7619687 0.8109244 0.8928571 0.8489754 0.89565124 0.81974608 0.8242390 0.6394453 0.7071238 0.8229707 8.5842e-01 0.6586271 0.8141834 0.8680383 0.8900651 0.7899654 0.8625528 0.8297524 2 0.7796392 0.8092417 -2.8263e-02 5 0.7711035 0.7978009 -0.02669735 9.5473e-01 7.8136e-02 insignificant 1.00000000 1.0000e+00 insignificant 9.9997e-01 1.7591e-03 weaklyHypometh 1.0000000 0.293178 insignificant -0.08406622 0.010531 lowCoverage 1 lowCoverage 0.7796392 0.7613365 0.02099584 5 0.7711035 0.7522017 0.0189018 2.3850e-01 9.1338e-01 insignificant 9.8199e-01 1.0000e+00 insignificant 2.7281e-01 9.4204e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.0064e-02 5.2409e-01 lowCoverage 1.0000e+00 lowCoverage 0.7796392 0.7931873 -0.03719150 5 0.7711035 0.8029341 -0.0318306 9.1105e-01 7.3378e-02 insignificant 1.0000e+00 7.5747e-01 insignificant 9.1087e-01 9.7121e-02 insignificant 1.0000e+00 9.9103e-01 insignificant -3.6444e-02 1.9610e-01 lowCoverage 1.0000000 lowCoverage 0.8092417 0.7613365 0.05002017 5 0.7978009 0.7522017 0.0455992 3.6573e-02 9.6847e-01 weaklyHypermeth 1.8471e-01 1.0000e+00 insignificant 7.9538e-03 9.9918e-01 weaklyHypermeth 6.4144e-02 1.0000e+00 weaklyHypermeth 0.1141304 4.2159e-02 lowCoverage 3.1229e-01 lowCoverage 0.8092417 0.7931873 -8.1621e-03 5 0.7978009 0.8029341 -0.00513322 7.3966e-01 5.2165e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.3503e-01 9.2771e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.04762184 0.15229660 lowCoverage 1.00000 lowCoverage 0.7613365 0.7931873 -0.06100267 5 0.7522017 0.8029341 -0.05073240 9.5586e-01 5.8470e-02 insignificant 1.0000e+00 2.9984e-01 insignificant 9.8346e-01 5.4369e-02 insignificant 1.0000000 3.4630e-01 insignificant -0.0665086 1.8875e-01 lowCoverage 0.94849824 lowCoverage chr19 54214050 54215050 53578 LHB ENSG00000104826 0.1701944 872 20 0.1846124 570 20 0.1740202 661 20 0.2749067 981 20 0.3534059 306 20 0.0909168 1395 20 0.2488090 749 21 0.3098741 418 20 0.3051143 486 22 0.4153655 507 20 0.2743993 640 20 0.1127866 450 20 0.2546207 594 20 0.4010271 243 8 0.5448203 511 21 0.0866244 190 20 0.0277350 304 13 0.23417797 1626 20 0.0030779 901 20 0.4035061 791 20 0.2468609 283 17 0.0023459 469 17 0.1411697 784 20 0.1902639 259 22 0.2947508 393 20 0.3255370 559 20 0.1515364 687 20 0.2983784 280 18 0.1741281 629 20 0.25971997 703 20 0.1417481 805 20 0.1025348 1043 20 0.0564295 624 20 0.0742813 706 20 0.0742347 778 17 0.0000000 205 13 0.127491 359 19 0.10364116 1011 19 0.3043006 787 20 0.0855351 904 20 0.0179687 842 20 0.2242344 1708 20 0.1688671 892 20 0.1760334 0.1837036 0.1034363 0.2422512 0.4034996 0.0493945 0.1729742 0.34737346 0.3793982 0.44742293 0.3097754 0.0737430 0.27811786 0.3214681 0.5701090 0.08949597 0.1359919 0.2624227 0.00567032 0.3694848 0.2003178 0.00208591 0.1052860 0.16286406 0.3380501 0.3613736 0.1427384 0.3937552 0.1373622 0.25955235 0.15341660 0.1148215 0.0697160 0.0497260 0.0717126 5.6116e-02 0.1593344 0.0590125 0.3225943 0.0443759 0.0158633 0.2414705 0.1873902 19 0.2292125 0.1969235 3.1849e-02 20 0.2464457 0.1895015 0.05694419 1.4318e-02 9.9999e-01 weaklyHypermeth 1.00000000 1.0000e+00 insignificant 1.5116e-02 1.0000e+00 weaklyHypermeth 1.0000000 1.000000 insignificant 0.04941858 0.244877 insignificant 1 insignificant 0.2292298 0.0792832 0.15370751 20 0.2563035 0.1102325 0.1460710 8.8488e-14 1.0000e+00 weaklyHypermeth 1.6089e-12 1.0000e+00 weaklyHypermeth 1.2384e-17 1.0000e+00 weaklyHypermeth 8.2558e-16 1.0000e+00 weaklyHypermeth 1.7082e-01 8.5034e-05 weaklyHypermeth 2.3621e-03 weaklyHypermeth 0.2289550 0.1683226 0.04903793 20 0.2253162 0.1517646 0.0735515 4.9504e-02 9.9998e-01 weaklyHypermeth 7.6161e-01 1.0000e+00 insignificant 1.4391e-02 1.0000e+00 weaklyHypermeth 3.7872e-01 1.0000e+00 insignificant 8.3319e-02 2.0072e-01 insignificant 1.0000000 insignificant 0.1970093 0.0792832 0.12122472 20 0.1970816 0.1102325 0.0868491 3.8685e-12 1.0000e+00 weaklyHypermeth 7.4395e-11 1.0000e+00 weaklyHypermeth 6.3036e-12 1.0000e+00 weaklyHypermeth 3.5020e-10 1.0000e+00 weaklyHypermeth 0.1214015 1.8422e-03 weaklyHypermeth 2.9713e-02 weaklyHypermeth 0.1969168 0.1683226 1.6087e-02 20 0.1802933 0.1517646 0.02852867 6.8468e-01 9.6002e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.5626e-01 9.8018e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03389995 0.57404485 insignificant 1.00000 insignificant 0.0790761 0.1683554 -0.09823046 20 0.0763397 0.1583631 -0.08202343 1.0000e+00 1.6747e-10 weaklyHypometh 1.0000e+00 4.7632e-09 weaklyHypometh 1.0000e+00 8.5389e-07 weaklyHypometh 1.0000000 4.0661e-05 weaklyHypometh -0.0875016 1.6239e-01 insignificant 0.86840578 insignificant chr19 54220450 54221450 53579 ENSG00000203339 0.8444208 688 16 0.6592695 334 16 0.7336533 472 16 0.8813628 492 12 0.8510686 450 16 0.8825641 507 14 0.8754330 447 16 0.7763612 336 16 0.7177983 369 13 0.8995575 468 13 0.8358640 622 16 0.7981884 406 13 0.6389531 481 13 0.7829898 185 6 0.7749393 454 13 0.8109708 338 13 0.6729175 205 8 0.65657994 1087 16 0.7184489 618 13 0.7967256 425 13 0.7574542 182 16 0.8003616 196 7 0.8503124 384 16 0.8489847 168 13 0.7415733 219 10 0.7903326 456 16 0.7225692 249 14 0.8032927 149 12 0.7785442 397 13 0.77941433 499 16 0.7443582 424 16 0.8675579 399 13 0.4799325 522 16 0.4046406 506 13 0.4669583 645 15 0.4185169 123 9 0.562894 309 16 0.30860559 627 16 0.8623351 641 16 0.8403363 505 16 0.8411179 495 13 0.7215111 799 10 0.8407620 347 13 0.8380325 0.6555639 0.6735276 0.8406770 0.8138095 0.8486192 0.8497268 0.75919604 0.7308234 0.86895849 0.8019665 0.7725080 0.59459648 0.8025814 0.7722878 0.79119143 0.7666138 0.6516596 0.68597702 0.7913608 0.8063304 0.73062116 0.8495392 0.87116520 0.7133843 0.7635940 0.7048614 0.7670388 0.7964439 0.75326795 0.78308066 0.8201252 0.4226577 0.3785193 0.4416593 2.9181e-01 0.5486989 0.2542103 0.8148694 0.8273936 0.8176559 0.7803104 0.8231031 10 0.7493072 0.7862903 -2.3129e-02 16 0.7400435 0.7064083 0.03363514 9.6403e-01 2.9939e-01 insignificant 1.00000000 1.0000e+00 insignificant 9.6960e-01 5.0448e-01 insignificant 1.0000000 1.000000 insignificant -0.00999297 0.664141 insignificant 1 insignificant 0.7493069 0.3711567 0.38429205 16 0.7244952 0.4419931 0.2825021 1.9353e-58 1.0000e+00 hypermethylated 6.4511e-56 1.0000e+00 hypermethylated 1.7136e-24 1.0000e+00 hypermethylated 3.4272e-22 1.0000e+00 hypermethylated 3.4015e-01 2.4673e-05 hypermethylated 7.7102e-04 hypermethylated 0.7493868 0.7926085 -0.06029555 14 0.7671125 0.8354577 -0.0683451 9.9965e-01 1.0226e-02 weaklyHypometh 1.0000e+00 2.3782e-01 insignificant 9.9892e-01 2.2533e-02 weaklyHypometh 1.0000e+00 5.0073e-01 insignificant -4.0809e-02 2.2491e-01 insignificant 1.0000000 insignificant 0.7866559 0.3711567 0.38515228 16 0.7685875 0.4419931 0.3265944 3.0161e-47 1.0000e+00 hypermethylated 7.5402e-45 1.0000e+00 hypermethylated 1.0797e-19 1.0000e+00 hypermethylated 3.5990e-17 1.0000e+00 hypermethylated 0.3501384 5.0399e-05 hypermethylated 1.6800e-03 hypermethylated 0.7865410 0.7926085 -2.9136e-02 14 0.7549750 0.8354577 -0.08048264 9.6763e-01 2.0807e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.9278e-01 2.6008e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03081617 0.32038728 insignificant 1.00000 insignificant 0.3709264 0.7926085 -0.44003300 14 0.4091692 0.8354577 -0.42628850 1.0000e+00 2.4082e-30 hypomethylated 1.0000e+00 4.0136e-28 hypomethylated 1.0000e+00 1.1254e-12 hypomethylated 1.0000000 2.2507e-10 hypomethylated -0.3809545 1.2658e-05 hypomethylated 0.00158229 hypomethylated chr19 54224350 54225350 53580 ENSG00000203338 0.7849636 189 8 0.7366302 386 13 0.7467225 570 13 0.9165853 195 12 0.8981951 330 14 0.8699314 621 11 0.7908875 456 14 0.8722803 372 13 0.8050758 371 13 0.8913197 535 13 0.8626376 568 14 0.8119256 307 13 0.5498324 527 13 0.9327318 83 4 0.7784765 495 13 0.7430979 296 11 0.7824328 181 10 0.50342229 165 12 0.7219983 511 13 0.8130333 556 10 0.8226905 232 14 0.8034188 134 9 0.8535622 250 13 0.7756778 181 13 0.7267656 106 6 0.8113534 497 14 0.7903163 245 13 0.8972471 134 10 0.7483962 456 13 0.78076890 593 14 0.8077342 566 13 0.8147310 712 14 0.4009340 487 14 0.6002169 472 13 0.4708445 534 12 0.2424173 125 11 0.673617 275 14 0.27581727 513 14 0.7511089 186 9 0.9138389 366 14 0.8745667 148 13 0.8217506 218 10 0.8367530 170 9 0.8688327 0.7320611 0.7426820 0.8789070 0.9242842 0.8573657 0.7808083 0.85201443 0.8157163 0.88420063 0.8764536 0.8193079 0.61179063 0.8340879 0.7862581 0.83199334 0.8219204 0.6049012 0.73558115 0.8015852 0.8266274 0.83165923 0.8558610 0.77170035 0.7828511 0.8171411 0.7654726 0.8856359 0.8385185 0.79628946 0.81739688 0.8987968 0.4979115 0.5996521 0.5797050 3.6380e-01 0.6323619 0.3393199 0.8827563 0.9190662 0.8849623 0.8345210 0.8225110 7 0.7794918 0.8226553 -3.4357e-02 13 0.8117388 0.7752033 0.03653546 9.9966e-01 1.1509e-02 weaklyHypometh 1.00000000 6.7700e-01 insignificant 9.5859e-01 1.2781e-01 insignificant 1.0000000 1.000000 insignificant -0.01211285 0.666447 insignificant 1 insignificant 0.7794632 0.4553015 0.32267185 13 0.7991880 0.5108285 0.2883595 3.9515e-39 1.0000e+00 hypermethylated 2.8225e-37 1.0000e+00 hypermethylated 1.3018e-19 1.0000e+00 hypermethylated 1.1834e-17 1.0000e+00 hypermethylated 3.4663e-01 3.1279e-03 weaklyHypermeth 4.5998e-02 weaklyHypermeth 0.7794346 0.8832721 -0.09466478 12 0.7848443 0.8756390 -0.0907947 9.9998e-01 1.1233e-07 weaklyHypometh 1.0000e+00 2.2467e-05 weaklyHypometh 9.9927e-01 6.9795e-05 weaklyHypometh 1.0000e+00 1.3959e-02 weaklyHypometh -4.8995e-02 2.0794e-01 insignificant 1.0000000 insignificant 0.8226553 0.4551122 0.35005483 13 0.7752033 0.4789017 0.2963016 3.5062e-35 1.0000e+00 hypermethylated 3.5062e-33 1.0000e+00 hypermethylated 9.1401e-17 1.0000e+00 hypermethylated 1.3057e-14 1.0000e+00 hypermethylated 0.3587474 3.3725e-03 weaklyHypermeth 4.8179e-02 weaklyHypermeth 0.8228126 0.8832721 -5.1095e-02 12 0.8145181 0.8756390 -0.06112093 9.9477e-01 2.4832e-04 weaklyHypometh 1.0000e+00 1.7520e-02 weaklyHypometh 9.8887e-01 5.0384e-03 weaklyHypometh 1.0000e+00 2.6680e-01 insignificant -0.03688179 0.26874819 insignificant 1.00000 insignificant 0.4550749 0.8832721 -0.38351107 12 0.4758877 0.8756390 -0.39975132 1.0000e+00 3.2912e-22 hypomethylated 1.0000e+00 2.7427e-20 hypomethylated 1.0000e+00 7.3486e-12 hypomethylated 1.0000000 9.1858e-10 hypomethylated -0.3956292 1.5606e-03 weaklyHypometh 0.04628405 weaklyHypometh chr19 54233450 54234450 53581 NTF6B ENSG00000212844 0.8671408 596 17 0.7294461 389 17 0.6840162 394 17 0.9075430 504 13 0.8473295 412 16 0.8833096 568 16 0.7338373 508 16 0.7865026 318 17 0.7858629 365 17 0.9178955 438 12 0.7957274 613 17 0.8121219 381 12 0.5611249 507 13 0.9267233 147 10 0.7964459 510 12 0.7606389 337 12 0.6655262 199 8 0.71563351 1021 18 0.7281198 708 17 0.8636434 414 16 0.8075131 218 16 0.8383183 158 5 0.7968606 438 17 0.7945769 214 17 0.8397436 213 10 0.8254090 547 17 0.7909711 261 14 0.7880123 189 13 0.7561222 491 13 0.77219326 559 17 0.7524597 529 17 0.8685920 491 17 0.4213612 463 14 0.4997098 464 13 0.5184304 508 15 0.4404138 125 9 0.550766 354 17 0.34507938 596 13 0.8342483 508 14 0.8890170 519 15 0.8441714 445 14 0.8230980 659 13 0.8911263 420 16 0.8631041 0.7747665 0.6844239 0.8879664 0.8546246 0.8651960 0.8130897 0.76063421 0.7997449 0.89361687 0.8340696 0.8610582 0.53955047 0.8812534 0.7864199 0.74727422 0.6903195 0.6695053 0.72183651 0.8722934 0.8845005 0.80786651 0.8619574 0.86704296 0.7480314 0.8025324 0.7850273 0.8024781 0.7966888 0.75495175 0.78979419 0.8945802 0.3517877 0.3884009 0.4409196 3.5618e-01 0.5611661 0.2532645 0.8515746 0.8878671 0.8401319 0.7902288 0.8538573 8 0.7682247 0.8109175 -3.0667e-02 17 0.7289304 0.7715659 -0.04263546 9.1131e-01 1.7318e-01 insignificant 1.00000000 1.0000e+00 insignificant 7.0088e-01 8.4619e-01 insignificant 1.0000000 1.000000 insignificant -0.01413489 0.550973 insignificant 1 insignificant 0.7683319 0.3786369 0.39603092 17 0.7789304 0.4194949 0.3594355 1.6561e-48 9.9285e-01 hypermethylated 1.6561e-46 1.0000e+00 hypermethylated 5.1750e-21 9.9840e-01 hypermethylated 7.3928e-19 1.0000e+00 hypermethylated 3.2580e-01 4.5673e-06 hypermethylated 1.5224e-04 hypermethylated 0.7687843 0.8459428 -0.06507251 14 0.7847361 0.8536016 -0.0688655 9.1327e-01 1.5038e-05 weaklyHypometh 1.0000e+00 1.3671e-03 weaklyHypometh 9.3809e-01 5.0400e-04 weaklyHypometh 1.0000e+00 4.5818e-02 weaklyHypometh -6.7903e-02 1.4498e-02 weaklyHypometh 0.3344967 insignificant 0.8108736 0.3787879 0.40418139 17 0.7595431 0.4415736 0.3179694 4.2971e-44 9.9995e-01 hypermethylated 6.1387e-42 1.0000e+00 hypermethylated 8.2671e-16 9.9805e-01 hypermethylated 9.1856e-14 1.0000e+00 hypermethylated 0.3399376 3.8238e-05 hypermethylated 1.3186e-03 hypermethylated 0.8111628 0.8459428 -2.8726e-02 14 0.8096854 0.8536016 -0.04391621 8.8165e-01 2.9557e-04 weaklyHypometh 1.0000e+00 1.7625e-02 weaklyHypometh 9.8637e-01 2.9673e-03 weaklyHypometh 1.0000e+00 2.0989e-01 insignificant -0.05376786 0.01426199 weaklyHypometh 0.65768 insignificant 0.3790484 0.8459428 -0.43648794 14 0.4699940 0.8536016 -0.38360753 9.9998e-01 7.1644e-31 hypomethylated 1.0000e+00 1.4329e-28 hypomethylated 1.0000e+00 4.6971e-12 hypomethylated 1.0000000 7.5555e-10 hypomethylated -0.3937054 8.0964e-06 hypomethylated 0.00134941 hypomethylated chr19 54251850 54252850 53582 CGB7 ENSG00000196337 0.3551146 539 17 0.1802747 355 17 0.3500672 441 17 0.1844620 514 11 0.2269640 323 17 0.2669486 439 13 0.1954166 584 17 0.2605291 251 17 0.2813435 467 17 0.2729023 372 16 0.2572906 630 17 0.1316225 446 17 0.2118671 517 17 NA 0 0 0.1980967 630 17 0.1972502 454 17 0.1428900 482 17 0.47784973 489 10 0.1181603 408 17 0.2925763 435 17 0.3165996 172 16 0.0506179 292 9 0.1888340 438 16 0.2147358 226 16 0.2874598 179 9 0.2992596 453 17 0.1131853 370 17 0.1469153 199 16 0.1282050 324 17 0.13534069 577 17 0.5061100 324 17 0.3472194 690 17 0.0180103 406 17 0.0854049 357 17 0.0000000 205 12 0.0000000 181 9 0.083987 179 15 0.03145521 465 17 0.4011547 503 14 0.1692040 606 17 0.0930253 427 9 0.2247341 511 9 0.2287963 390 15 0.3931453 0.1487245 0.3509297 0.1572494 0.2174216 0.3667990 0.1915070 0.27969136 0.2704641 0.29829662 0.2594315 0.1250780 0.21922446 NA 0.2004785 0.19512270 0.1541250 0.3489130 0.06420840 0.3066215 0.3305883 0.08050966 0.2093479 0.22992800 0.3890295 0.3086659 0.1174255 0.1536405 0.1206790 0.13355606 0.58018482 0.3677064 0.0169105 0.0992988 0.0026905 9.6029e-04 0.0928858 0.0484637 0.4040599 0.2090671 0.1481735 0.2951514 0.2330566 9 0.2462397 0.2431668 3.3503e-03 17 0.2421980 0.2387611 0.00343695 4.1025e-01 7.9763e-01 insignificant 1.00000000 1.0000e+00 insignificant 8.7010e-02 9.8941e-01 insignificant 1.0000000 1.000000 insignificant 0.01431733 0.737198 insignificant 1 insignificant 0.2462397 0.0379253 0.20648554 17 0.2421980 0.0365745 0.2056235 4.7453e-37 1.0000e+00 hypermethylated 2.7914e-35 1.0000e+00 hypermethylated 1.1275e-26 1.0000e+00 hypermethylated 5.6377e-24 1.0000e+00 hypermethylated 2.0571e-01 1.3022e-07 hypermethylated 7.6597e-06 hypermethylated 0.2462397 0.2839557 -0.01362700 14 0.2421980 0.2281231 0.0140749 2.3239e-01 7.1363e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.3249e-01 7.3740e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.8808e-02 7.4372e-01 insignificant 1.0000000 insignificant 0.2431668 0.0379253 0.20287798 17 0.2387611 0.0365745 0.2021865 1.6954e-20 1.0000e+00 hypermethylated 6.7815e-19 1.0000e+00 hypermethylated 1.9552e-17 1.0000e+00 hypermethylated 3.3634e-15 1.0000e+00 hypermethylated 0.1913972 2.8112e-04 weaklyHypermeth 7.0279e-03 weaklyHypermeth 0.2431668 0.2839557 -1.3837e-02 14 0.2387611 0.2281231 0.01063794 3.8851e-01 5.4999e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.9021e-01 5.1265e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00449063 0.94461196 insignificant 1.00000 insignificant 0.0379253 0.2839557 -0.22046433 14 0.0365745 0.2281231 -0.19154860 1.0000e+00 8.2911e-23 hypomethylated 1.0000e+00 9.2124e-21 hypomethylated 1.0000e+00 2.4522e-11 hypomethylated 1.0000000 2.2293e-09 hypomethylated -0.1869066 1.8299e-02 weaklyHypometh 0.20794285 insignificant chr19 54394150 54395150 53586 TRPM4 ENSG00000130529 0.7987245 335 9 0.7189498 202 9 0.6376561 129 9 0.8490905 191 9 0.6811448 76 6 0.7708721 482 9 0.6243018 122 9 0.8265129 161 9 0.8184226 145 9 0.8657407 93 6 0.8266470 379 9 0.8513655 69 5 0.8083305 205 9 0.9632035 38 3 0.7855848 156 9 0.6938240 85 6 0.7084594 72 4 0.74937755 219 8 0.7502336 209 9 0.7411997 376 9 0.6347403 75 6 0.7282512 105 6 0.8200333 206 9 0.7762188 133 9 0.7073239 58 5 0.7657415 244 7 0.7668360 127 9 0.7372475 85 6 0.7887418 199 9 0.85299651 244 9 0.7883103 187 9 0.8583494 395 9 0.6436404 181 9 0.7673427 153 9 0.7436979 226 9 0.5956159 74 4 0.756073 206 9 0.84592509 268 9 0.7113704 367 9 0.8433535 272 9 0.8396765 189 9 0.7600164 241 9 0.8434972 256 9 0.8404397 0.8465181 0.7847217 0.8740129 0.8244318 0.8734328 0.7569138 0.85760206 0.8732351 0.85252604 0.8646942 0.9379061 0.82010704 0.8852756 0.8554490 0.84818681 0.7919526 0.8751682 0.84774564 0.8784232 0.8507999 0.77659735 0.8264948 0.89035962 0.8463307 0.8890378 0.8094941 0.8994184 0.7923360 0.88561937 0.89365027 0.8661211 0.8037884 0.8117823 0.8058335 7.9712e-01 0.8479843 0.8677557 0.8716053 0.8925939 0.9351521 0.8581927 0.9104276 6 0.8396252 0.8476144 -2.9825e-03 9 0.8066322 0.7331369 0.07349537 3.8609e-01 2.1670e-01 insignificant 1.00000000 1.0000e+00 insignificant 4.7813e-01 5.1193e-01 insignificant 1.0000000 1.000000 insignificant 0.00474954 0.855722 insignificant 1 insignificant 0.8384163 0.8203971 0.01817368 9 0.7511745 0.7127599 0.0384147 6.1567e-02 6.9543e-01 insignificant 2.8905e-01 1.0000e+00 insignificant 1.6703e-01 7.6066e-01 insignificant 8.3936e-01 1.0000e+00 insignificant 4.8100e-02 2.8006e-01 insignificant 1.0000e+00 insignificant 0.8384244 0.8784906 -0.03396976 9 0.7429587 0.7370129 0.0059458 9.6512e-01 2.5924e-02 weaklyHypometh 1.0000e+00 4.4619e-01 insignificant 9.7915e-01 3.6238e-02 weaklyHypometh 1.0000e+00 6.4876e-01 insignificant -2.6101e-02 4.5028e-01 insignificant 1.0000000 insignificant 0.8482927 0.8211382 0.01649343 9 0.7797642 0.7840358 -0.0042716 5.3480e-03 2.3793e-01 weaklyHypermeth 3.2810e-02 1.0000e+00 weaklyHypermeth 3.1042e-02 4.0725e-01 weaklyHypermeth 2.0289e-01 1.0000e+00 insignificant 0.0433501 3.2527e-01 insignificant 1.0000e+00 insignificant 0.8496572 0.8791541 -3.2426e-02 9 0.8108491 0.8189032 -0.00805405 6.2844e-01 6.6449e-03 weaklyHypometh 1.0000e+00 1.9544e-01 insignificant 7.1553e-01 1.1384e-02 weaklyHypometh 1.0000e+00 4.0040e-01 insignificant -0.03085025 0.37313153 insignificant 1.00000 insignificant 0.8200723 0.8784906 -0.05272850 9 0.6840358 0.7370129 -0.05297703 9.9973e-01 2.9739e-02 weaklyHypometh 1.0000e+00 1.6163e-01 insignificant 9.9994e-01 6.6032e-02 insignificant 1.0000000 4.0761e-01 insignificant -0.0742004 1.4186e-01 insignificant 0.79250341 insignificant chr19 54534050 54535050 53589 CD37 ENSG00000104894 0.0282964 152 6 0.0048928 545 6 0.0512175 328 6 0.0244949 238 6 0.0088235 345 6 0.0276315 531 6 0.0114916 365 6 0.0209808 327 6 0.0155950 418 6 0.0246146 266 6 0.0318147 371 6 0.0550799 231 6 0.0365617 239 6 0.0229885 237 6 0.0266048 406 6 0.0086207 223 6 0.1190476 18 0 0.00816327 238 6 0.0216354 551 6 0.0131341 276 6 0.0043290 215 6 0.0096801 115 6 0.0206369 132 6 0.0314123 268 7 0.1681256 102 6 0.0146375 578 6 0.0262354 296 6 0.0088068 243 6 0.0000000 367 6 0.01323022 680 6 0.1312491 692 6 0.0137965 410 6 0.0288549 374 6 0.0402116 211 6 0.0000000 75 2 0.0000000 10 0 0.012157 399 6 0.03858074 611 6 0.0208926 302 6 0.0215575 224 6 0.0924908 164 6 0.0165099 237 6 0.0254896 183 6 0.0243464 0.0035171 0.0540009 0.0219842 0.0089365 0.0288862 0.0100570 0.02369169 0.0130888 0.02896240 0.0322018 0.0511535 0.04034694 0.0167299 0.0224571 0.01281820 0.1000582 0.0154575 0.02768939 0.0126906 0.0037019 0.01502371 0.0322681 0.00981732 0.0212875 0.0122875 0.0263465 0.0122362 0.0000000 0.01325130 0.00738650 0.0099681 0.0243484 0.0422856 0.0157324 0.0000e+00 0.0122198 0.0402502 0.0193553 0.0236613 0.0812190 0.0233989 0.0431032 6 0.0242665 0.0141567 1.0421e-02 6 0.0190954 0.0389009 -0.01980557 6.5160e-02 7.6767e-01 insignificant 1.00000000 1.0000e+00 insignificant 6.7206e-02 6.0755e-01 insignificant 1.0000000 1.000000 insignificant -0.00876049 0.605513 insignificant 1 insignificant 0.0242819 0.0303571 -0.00621308 6 0.0218233 0.0278997 -0.0060764 7.3563e-01 1.2450e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.1313e-01 5.7493e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.1171e-03 4.0572e-01 lowCoverage 1.0000e+00 lowCoverage 0.0242665 0.0342651 -0.00932860 6 0.0190954 0.0260968 -0.0070015 9.8765e-01 1.7449e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9900e-01 1.3679e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -7.3036e-03 6.5454e-01 insignificant 1.0000000 insignificant 0.0141740 0.0303571 -0.01621234 6 0.0444582 0.0278997 0.0165585 8.9391e-01 9.5695e-06 weaklyHypometh 1.0000e+00 7.9746e-04 weaklyHypometh 7.9130e-01 2.6253e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 0.0168776 3.4492e-01 lowCoverage 1.0000e+00 lowCoverage 0.0141532 0.0342342 -2.0290e-02 6 0.0345786 0.0231972 0.01138141 9.9232e-01 1.6420e-03 weaklyHypometh 1.0000e+00 6.0816e-02 weaklyHypometh 9.9589e-01 6.0522e-03 weaklyHypometh 1.0000e+00 2.8820e-01 insignificant 0.00145687 0.94625074 insignificant 1.00000 insignificant 0.0303571 0.0343270 -0.00272889 6 0.0278997 0.0298250 -0.00192525 7.1766e-01 2.0056e-01 insignificant 1.0000e+00 8.6447e-01 insignificant 9.2177e-01 8.9973e-02 insignificant 1.0000000 5.1413e-01 insignificant -0.0154208 3.7704e-01 lowCoverage 1.00000000 lowCoverage chr19 54615750 54616750 53592 CCDC155 ENSG00000161609 0.0196429 208 10 0.0087121 404 10 0.0056268 403 10 0.0000000 318 9 0.0000000 296 10 0.0832103 474 10 0.0095294 512 10 0.0098925 320 10 0.0000000 411 10 0.0065329 379 10 0.0240441 364 10 0.1666667 451 10 0.0018868 403 10 NA 0 0 0.0093846 418 10 0.0281956 385 10 0.0209278 511 10 0.05805568 321 9 0.0029762 276 10 0.0934343 361 10 0.0000000 121 10 0.0024390 236 7 0.0022633 319 10 0.0061958 200 9 0.0048077 149 7 0.0015298 509 17 0.0000000 164 9 0.0206044 142 8 0.0022727 284 10 0.00285747 465 10 0.0000000 508 17 0.0000000 503 10 0.1181818 331 10 0.0502392 236 7 0.0526316 583 16 0.0039683 290 15 0.082899 106 7 0.03045493 410 17 0.0153509 397 10 0.0099673 462 17 0.0555556 284 14 0.0000000 240 7 0.0408587 461 18 0.0149461 0.0103591 0.0051539 0.0000000 0.0000000 0.0062539 0.0051887 0.01073176 0.0000000 0.00219095 0.0164943 0.0000000 0.00045907 NA 0.0105465 0.01930643 0.0340537 0.0083777 0.00101379 0.0027710 0.0000000 0.00308587 0.0020118 0.00369260 0.0047662 0.0010386 0.0000000 0.0275594 0.0072993 0.00531771 0.00000000 0.0000000 0.0182482 0.0324112 0.0000000 0.0000e+00 0.0210112 0.0146222 0.0022303 0.0032847 0.0000000 0.0000000 0.0186708 5 0.0084546 0.0041701 4.3006e-03 10 0.1079604 0.0017064 0.10625397 5.6956e-01 1.0000e+00 insignificant 1.00000000 1.0000e+00 insignificant 4.6903e-01 1.0000e+00 insignificant 1.0000000 1.000000 insignificant 0.02529907 0.020933 weaklyHypermeth 1 insignificant 0.0081808 0.0209611 -0.00225990 10 0.0706233 0.0839365 -0.0133132 9.9158e-01 5.3413e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9805e-01 9.5174e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -2.7516e-02 1.8339e-01 insignificant 1.0000e+00 insignificant 0.0079079 0.0070499 0.00150870 10 0.0254257 0.0325360 -0.0071102 9.7294e-01 8.7722e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6466e-01 9.9604e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.5334e-03 7.5653e-01 insignificant 1.0000000 insignificant 0.0041794 0.0209611 -0.00844749 10 0.0018689 0.0839365 -0.0820676 1.0000e+00 5.5191e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 1.0000e+00 2.4590e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0528149 2.2821e-02 weaklyHypometh 2.1123e-01 insignificant 0.0041970 0.0070499 -2.7426e-03 10 0.0020656 0.0325360 -0.03047032 9.9999e-01 7.5046e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9998e-01 9.7756e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02076564 0.11421095 insignificant 1.00000 insignificant 0.0195072 0.0070499 0.00760943 17 0.0541754 0.0325360 0.02163946 6.9807e-01 9.7621e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.9387e-01 9.9746e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.0320493 1.3477e-01 insignificant 0.78104451 insignificant chr19 54621850 54622850 53594 PTH2 ENSG00000142538 0.4759740 116 8 0.4341631 90 5 0.4484192 250 9 0.4276175 105 7 0.5181004 164 8 0.4843108 182 8 0.5433680 104 7 0.4884322 174 7 0.6152047 144 6 0.4925868 157 6 0.5043814 185 6 0.4737025 137 7 0.4228305 154 7 0.5764310 143 7 0.4205827 190 7 0.5144928 113 3 0.7000000 8 0 0.38270563 167 8 0.4536195 184 8 0.4728499 114 6 0.5697044 59 7 0.3250000 110 8 0.4721444 124 9 0.3646244 100 6 0.5830177 90 8 0.4621212 118 6 0.4098873 159 7 0.5302146 82 6 0.5674261 118 7 0.49009269 209 5 0.4697516 149 5 0.6699179 122 5 0.2682602 110 7 0.2706767 73 7 0.0000000 9 0 0.5000000 42 3 0.257238 173 6 0.57321429 120 6 0.3726025 124 8 0.5379914 125 7 0.2350265 105 8 0.4935897 81 4 0.4840358 108 7 0.7190896 0.6369158 0.6144102 0.6198653 0.6590767 0.5914908 0.6392486 0.65339652 0.7210884 0.71706148 0.7334510 0.5438712 0.60615077 0.7464750 0.6220462 0.66115794 0.7117347 0.5628843 0.59507963 0.6900894 0.6549403 0.45546647 0.6841665 0.44247337 0.6863404 0.7091837 0.6210845 0.7656752 0.6795692 0.59678227 0.62327196 0.6874447 0.3708496 0.3528464 0.5085764 6.1990e-01 0.4715457 0.7341199 0.5646157 0.6711841 0.4271429 0.7561813 0.6750528 2 0.6348490 0.6256944 1.8911e-02 7 0.4640514 0.4543594 0.00969204 6.5511e-01 5.4912e-01 insignificant 1.00000000 1.0000e+00 insignificant 8.8938e-01 7.1060e-01 insignificant 1.0000000 1.000000 insignificant -0.00033657 0.991912 insignificant 1 insignificant 0.6348490 0.4952562 0.14517164 7 0.4640514 0.2761069 0.1879445 4.1759e-07 9.7925e-01 weaklyHypermeth 4.0543e-06 1.0000e+00 weaklyHypermeth 3.2225e-02 9.9262e-01 weaklyHypermeth 2.1062e-01 1.0000e+00 insignificant 1.8092e-01 8.1927e-02 lowCoverage 5.6358e-01 lowCoverage 0.6350365 0.4953959 0.04531392 8 0.4604566 0.4533893 0.0070673 7.5337e-02 9.9263e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.2535e-01 9.4298e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.7839e-02 2.9083e-01 insignificant 1.0000000 insignificant 0.6256944 0.4952562 0.13016800 7 0.4543594 0.2761069 0.1782525 1.4602e-03 9.9939e-01 weaklyHypermeth 1.0140e-02 1.0000e+00 weaklyHypermeth 5.7120e-02 9.9932e-01 insignificant 3.4204e-01 1.0000e+00 insignificant 0.1812604 8.3275e-02 lowCoverage 5.2047e-01 lowCoverage 0.6258693 0.4953959 3.1049e-02 7 0.4497953 0.4533893 -0.00359396 2.3618e-01 9.7470e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.7327e-01 8.4330e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.06817602 0.30884004 insignificant 1.00000 insignificant 0.4980916 0.4953959 -0.09461661 7 0.3037176 0.4533893 -0.14967166 9.3000e-01 4.4163e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8323e-01 4.6526e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.1130844 2.8760e-01 lowCoverage 1.00000000 lowCoverage chr19 54623850 54624850 53595 PTH2 ENSG00000142538 0.2691234 253 7 0.1675956 272 7 0.3647317 268 7 0.2273293 191 6 0.2300216 105 5 0.2218707 330 6 0.2299283 158 5 0.2219520 203 5 0.2601386 249 5 0.3679716 298 5 0.3213947 198 5 0.3012525 158 5 0.1137566 222 5 0.0804598 87 3 0.1406852 189 5 0.1665992 126 5 0.1995951 113 3 0.24120737 249 6 0.1614716 273 5 0.1162360 366 6 0.1326317 100 5 0.0774229 80 5 0.2454888 247 7 0.1324830 117 5 0.1828571 40 3 0.2707748 279 7 0.1378496 321 5 0.2233100 63 5 0.1068346 301 5 0.10914827 273 7 0.0854824 354 7 0.1724577 366 6 0.0532384 220 7 0.1026909 242 5 0.0000000 80 5 0.1781818 61 3 0.176692 85 5 0.05113054 331 7 0.1463185 350 7 0.0752881 362 5 0.1007080 195 6 0.1123569 443 5 0.2161985 230 6 0.1339153 0.2235798 0.3926900 0.1583954 0.2676357 0.1704986 0.3490793 0.22550741 0.2836805 0.26430786 0.3808640 0.2949331 0.11617974 0.2036291 0.1597591 0.17934343 0.1427286 0.0987459 0.17985274 0.1346484 0.1926304 0.07898998 0.1911176 0.16939761 0.2163147 0.3266616 0.1445989 0.2472383 0.1657492 0.14262575 0.09938889 0.2146764 0.0576551 0.0953752 0.0053543 1.0374e-01 0.1751444 0.0402182 0.0455082 0.0609735 0.0806397 0.1503272 0.0619989 5 0.1910635 0.1499410 3.7795e-02 6 0.2890710 0.2154673 0.07360365 3.2371e-03 9.9998e-01 weaklyHypermeth 0.29428611 1.0000e+00 insignificant 1.6530e-03 9.9968e-01 weaklyHypermeth 0.2361473 1.000000 insignificant 0.06377097 0.018825 weaklyHypermeth 1 insignificant 0.1904873 0.0677134 0.13057100 6 0.1827673 0.0620849 0.1206824 2.1391e-07 9.9990e-01 weaklyHypermeth 2.1179e-06 1.0000e+00 weaklyHypermeth 5.6818e-06 1.0000e+00 weaklyHypermeth 8.8777e-05 1.0000e+00 weaklyHypermeth 1.2651e-01 5.2779e-03 weaklyHypermeth 7.1323e-02 weaklyHypermeth 0.1920130 0.0848101 0.11770213 5 0.2527073 0.1014245 0.1512828 7.7901e-07 1.0000e+00 weaklyHypermeth 7.7502e-05 1.0000e+00 weaklyHypermeth 1.3768e-06 1.0000e+00 weaklyHypermeth 2.2946e-04 1.0000e+00 weaklyHypermeth 8.9992e-02 1.5617e-02 weaklyHypermeth 0.3344967 insignificant 0.1498423 0.0677134 0.09593397 6 0.1443341 0.0620849 0.0822493 3.2893e-05 9.7622e-01 weaklyHypermeth 3.0742e-04 1.0000e+00 weaklyHypermeth 4.7691e-04 9.9677e-01 weaklyHypermeth 5.2407e-03 1.0000e+00 weaklyHypermeth 0.0627395 1.0511e-01 insignificant 6.3662e-01 insignificant 0.1496063 0.0797428 7.8601e-02 5 0.1282970 0.0682494 0.06004758 2.0134e-03 9.8580e-01 weaklyHypermeth 6.1011e-02 1.0000e+00 weaklyHypermeth 1.9838e-03 9.9897e-01 weaklyHypermeth 1.1021e-01 1.0000e+00 insignificant 0.02622105 0.41173878 insignificant 1.00000 insignificant 0.0677134 0.0798455 -0.01009877 5 0.0620849 0.0767806 -0.01469575 7.1891e-01 1.8815e-01 insignificant 1.0000e+00 8.1840e-01 insignificant 8.7490e-01 2.9011e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.0365185 3.6602e-01 insignificant 1.00000000 insignificant chr19 54763850 54764850 53598 ENSG00000207073 0.7494970 147 7 0.6753843 158 7 0.6145075 105 7 0.7881416 147 7 0.5376543 93 6 0.7394312 269 7 0.5736845 144 7 0.7208060 132 7 0.6241222 124 8 0.8649867 112 7 0.6887049 306 7 0.6648810 82 4 0.7187793 135 7 0.6111111 48 4 0.7713325 141 7 0.4727311 115 4 0.7129878 76 4 0.78522154 154 7 0.5846892 248 7 0.8269661 288 7 0.7381629 78 5 0.8572674 84 5 0.6677437 140 7 0.7464440 95 6 0.9042443 67 5 0.7134616 268 7 0.7238931 91 5 0.6596320 63 5 0.6764319 149 7 0.74192816 166 7 0.5865962 200 7 0.6890901 423 7 0.7040273 157 7 0.4770593 169 7 0.7482513 200 7 0.8127555 96 4 0.628162 99 7 0.65572992 218 7 0.8017661 134 7 0.8154826 175 7 0.7679602 148 7 0.7548203 116 7 0.7927475 164 7 0.8413676 0.7053782 0.7051268 0.8510205 0.7732733 0.8384906 0.7414409 0.79330122 0.7948170 0.82929330 0.8126190 0.8931789 0.84545434 0.7898301 0.8584677 0.72163616 0.8432483 0.8193141 0.77710918 0.8581937 0.7946355 0.85749426 0.8365403 0.83005392 0.9180131 0.7772025 0.7525832 0.8175676 0.7188106 0.79267314 0.72323888 0.8045656 0.8099464 0.6652751 0.8017453 7.7196e-01 0.6976307 0.7057320 0.8881562 0.8878666 0.8598529 0.7919939 0.8678938 4 0.7589286 0.7598684 3.6618e-04 7 0.6717458 0.6566292 0.01511666 3.3830e-01 1.8909e-01 insignificant 1.00000000 1.0000e+00 insignificant 5.7840e-01 8.1128e-02 insignificant 1.0000000 1.000000 insignificant -0.03912694 0.254165 insignificant 1 insignificant 0.7589286 0.6932907 0.06322972 7 0.6717458 0.5231591 0.1485867 1.4775e-04 9.9202e-01 weaklyHypermeth 1.1363e-03 1.0000e+00 weaklyHypermeth 3.5547e-03 9.9857e-01 weaklyHypermeth 3.0644e-02 1.0000e+00 weaklyHypermeth 1.5283e-02 7.7828e-01 insignificant 1.0000e+00 insignificant 0.7626667 0.8276798 -0.05869777 7 0.7268311 0.7875671 -0.0607360 9.9892e-01 1.8829e-03 weaklyHypometh 1.0000e+00 7.5316e-02 weaklyHypometh 9.9958e-01 9.2378e-03 weaklyHypometh 1.0000e+00 2.7170e-01 insignificant -1.0027e-01 5.9805e-04 weaklyHypometh 0.0460040 weaklyHypometh 0.7598684 0.6932907 0.06321485 7 0.6566292 0.5231591 0.1334700 1.8461e-04 9.9846e-01 weaklyHypermeth 1.5009e-03 1.0000e+00 weaklyHypermeth 3.8705e-04 9.9658e-01 weaklyHypermeth 4.3550e-03 1.0000e+00 weaklyHypermeth 0.0544104 3.3777e-01 insignificant 1.0000e+00 insignificant 0.7615639 0.8276798 -5.8878e-02 7 0.7370947 0.7875671 -0.05047247 9.3512e-01 1.9604e-02 weaklyHypometh 1.0000e+00 4.4555e-01 insignificant 7.6894e-01 6.9154e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.06114741 0.04051473 weaklyHypometh 0.88182 insignificant 0.6970021 0.8276798 -0.12007725 7 0.6726332 0.7875671 -0.11493396 9.9995e-01 9.8508e-05 weaklyHypometh 1.0000e+00 1.0480e-03 weaklyHypometh 9.9989e-01 1.6808e-03 weaklyHypometh 1.0000000 2.0751e-02 weaklyHypometh -0.1155578 5.7928e-02 insignificant 0.44327702 insignificant chr19 55973350 55974350 53619 GPR32 ENSG00000142511 0.6728439 215 7 0.4954565 522 8 0.5851560 190 7 0.6099633 228 7 0.5471816 222 8 0.6404763 512 10 0.4648680 298 7 0.5492874 273 7 0.6881372 229 7 0.6321850 222 8 0.6161604 425 9 0.5725394 174 7 0.4246816 232 7 0.6203431 56 4 0.5343245 210 7 0.6491257 133 7 0.6142524 422 8 0.51623829 153 6 0.3749111 270 7 0.5559706 452 8 0.5795919 123 7 0.4374888 150 7 0.4142366 226 7 0.5857713 214 8 0.5980192 137 5 0.4529607 348 8 0.4707283 195 8 0.6214716 122 7 0.6704904 212 7 0.53524560 375 10 0.4329136 382 8 0.6622978 503 10 0.6146990 363 7 0.5021395 190 7 0.4899517 267 5 0.4382045 111 6 0.504743 243 8 0.56253385 288 7 0.5454031 230 7 0.6777369 254 10 0.6366855 176 7 0.6814848 200 6 0.5510155 182 6 0.5847053 0.5684960 0.4661668 0.6028186 0.5060410 0.6562403 0.4868012 0.58126924 0.6190127 0.65996326 0.6241651 0.5827463 0.52356950 0.5446462 0.5838023 0.58868380 0.6311400 0.6090777 0.45154500 0.6048413 0.6445677 0.46777464 0.6376251 0.58386867 0.4939686 0.5878496 0.5197275 0.6781347 0.6213975 0.66263759 0.45828103 0.6235306 0.6101785 0.4421928 0.5698843 4.7936e-01 0.5565131 0.5753740 0.6302439 0.6626197 0.6310824 0.6440511 0.5518968 6 0.5539820 0.5520938 -6.0664e-03 7 0.5039419 0.4191580 0.08478390 8.6198e-01 8.7860e-01 insignificant 1.00000000 1.0000e+00 insignificant 7.8549e-01 8.1212e-01 insignificant 1.0000000 1.000000 insignificant 0.02977047 0.372112 insignificant 1 insignificant 0.5541038 0.5195072 0.01776791 7 0.5465941 0.4534347 0.0931594 2.3862e-01 6.8865e-01 insignificant 9.8199e-01 1.0000e+00 insignificant 2.9632e-01 8.0908e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.9493e-02 1.4037e-01 insignificant 8.1138e-01 insignificant 0.5542058 0.6190019 -0.04654038 7 0.5962845 0.6638343 -0.0675498 9.8702e-01 6.5442e-02 insignificant 1.0000e+00 7.1133e-01 insignificant 9.7082e-01 1.3775e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -5.0260e-02 1.9174e-01 insignificant 1.0000000 insignificant 0.5523139 0.5198358 0.02907415 7 0.4708234 0.4954782 -0.0246548 6.5526e-01 9.1649e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.8759e-01 9.1453e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0197228 6.0042e-01 insignificant 1.0000e+00 insignificant 0.5529056 0.6190019 -4.4875e-02 7 0.5109731 0.6638343 -0.15286121 9.0098e-01 2.5256e-02 weaklyHypometh 1.0000e+00 5.0512e-01 insignificant 8.1321e-01 9.5731e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.08003051 0.07240872 insignificant 1.00000 insignificant 0.5198630 0.6190019 -0.06198181 7 0.4946561 0.6638343 -0.16917823 8.2963e-01 3.5564e-02 weaklyHypometh 1.0000e+00 1.9018e-01 insignificant 8.9610e-01 6.9128e-02 insignificant 1.0000000 4.1643e-01 insignificant -0.0997533 3.2429e-02 weaklyHypometh 0.29480613 insignificant chr19 56030750 56031750 53620 KLK15 ENSG00000174562 0.0464246 1340 23 0.1034227 574 26 0.0579343 567 27 0.0073688 1216 22 0.0802389 639 27 0.1073119 1154 27 0.0557956 651 27 0.0151071 560 27 0.0254920 658 26 0.0517129 795 27 0.1067444 700 27 0.0447464 405 23 0.0237716 514 27 0.0291589 318 24 0.0463909 651 27 0.0218254 177 11 0.0379845 113 4 0.13671179 1576 22 0.0729063 668 22 0.1897608 541 24 0.0639352 315 18 0.0481599 554 25 0.0482231 451 26 0.0955322 396 22 0.0875996 1976 23 0.1094309 925 26 0.0826191 476 24 0.1134100 143 10 0.0563317 443 19 0.24116343 491 27 0.1116959 769 26 0.0144022 969 23 0.0486553 492 25 0.0090210 654 23 0.0668025 499 14 0.0000000 635 14 0.092591 551 26 0.14326712 962 28 0.0793393 1348 24 0.0161757 1130 24 0.0450171 1010 22 0.0396029 1577 22 0.0102807 645 26 0.0320625 0.0252900 0.0352918 0.0146615 0.0362105 0.0387196 0.0347996 0.02091681 0.0190535 0.03526372 0.0925137 0.0119382 0.03380130 0.0348983 0.0514851 0.00373349 NA 0.0355604 0.01370850 0.2017452 0.0610776 0.02256451 0.0173913 0.00942194 0.0150305 0.0464424 0.0512421 0.0370213 0.0238709 0.25545317 0.03227969 0.0454445 0.0322023 0.0075262 0.0433786 3.7385e-04 0.0151886 0.0309843 0.0208979 0.0334577 0.0097630 0.0235172 0.0296689 13 0.0354296 0.0434120 -8.9400e-03 27 0.1731847 0.1308741 0.04231055 9.8265e-01 8.0640e-01 insignificant 1.00000000 1.0000e+00 insignificant 9.8456e-01 9.8368e-01 insignificant 1.0000000 1.000000 insignificant -0.02633478 0.188632 insignificant 1 insignificant 0.0353495 0.0179847 0.01956084 27 0.1360028 0.1376601 -0.0016573 2.5832e-01 9.9968e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.1719e-01 9.9955e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.9843e-03 9.0511e-01 insignificant 1.0000e+00 insignificant 0.0349462 0.0169937 0.01502929 22 0.0896250 0.1010004 -0.0113754 1.5495e-01 9.9653e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.4312e-01 9.9911e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.4957e-02 1.4854e-01 insignificant 1.0000000 insignificant 0.0439407 0.0179514 0.02962178 27 0.1437971 0.1211640 0.0226331 5.8633e-01 9.9995e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.1320e-01 9.9999e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0293190 3.0706e-01 insignificant 1.0000e+00 insignificant 0.0425478 0.0166433 2.2422e-02 22 0.0835898 0.0706974 0.01289235 1.8856e-01 9.9998e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.4617e-01 9.9999e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.05129211 0.02468788 weaklyHypermeth 0.79819 insignificant 0.0164762 0.0166491 -0.00265504 22 0.0477512 0.0729067 -0.02515547 7.5499e-01 9.3215e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3042e-01 9.8336e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.0219731 4.0760e-01 insignificant 1.00000000 insignificant chr19 56126850 56127850 53621 ENSG00000177117 0.8571429 30 2 0.8391393 157 6 0.6592449 157 7 0.9848485 20 1 0.9040404 117 6 0.8741606 42 5 0.8551095 153 6 0.8828536 111 4 0.8501047 88 4 0.9291643 118 4 0.8711943 190 6 0.8190775 147 4 0.9273504 97 4 0.5000000 2 0 0.8650907 99 4 0.8283371 83 4 0.8511600 90 5 0.70000000 11 0 0.6766096 138 5 0.8928571 21 1 0.9018939 50 4 0.7500000 3 0 0.9155303 44 4 0.9133333 26 3 1.0000000 1 0 0.9298820 106 6 0.7757937 38 4 0.8750000 39 3 0.8775474 101 5 0.84004841 133 6 0.9266625 136 6 0.7873677 33 4 0.6390795 149 6 0.6806305 96 4 0.8000000 52 5 0.7500000 11 0 0.760657 90 6 0.69107435 94 4 0.9468391 54 4 0.9381988 69 5 0.9000000 10 2 1.0000000 8 0 0.9799331 60 2 1.0000000 0.8631016 0.7086780 1.0000000 0.9464809 0.8472173 0.8362388 0.82201686 0.8913806 0.91681792 0.9078613 0.8046747 0.90345139 NA 0.8001574 0.92054080 0.8246288 1.0000000 0.83242564 1.0000000 0.8585044 0.79407997 0.9008065 0.95161290 0.8764390 0.9466276 0.7154378 0.8387097 0.7906313 0.86665359 0.93817204 0.8012673 0.6732806 0.7652455 0.8064516 6.7742e-01 0.8237272 0.7610887 0.9516129 1.0000000 NA 1.0000000 1.0000000 0 0.8538296 0.8816901 -2.8657e-02 5 0.8597981 0.8727716 -0.01297357 8.0150e-01 2.3288e-01 insignificant 1.00000000 1.0000e+00 insignificant 7.1100e-01 5.7017e-01 insignificant 1.0000000 1.000000 insignificant -0.04604734 0.172623 lowCoverage 1 lowCoverage 0.8538296 0.7032520 0.15348929 5 0.8597981 0.6939348 0.1658632 2.3037e-06 1.0000e+00 weaklyHypermeth 2.0942e-05 1.0000e+00 weaklyHypermeth 4.3523e-03 9.9803e-01 weaklyHypermeth 3.6884e-02 1.0000e+00 weaklyHypermeth 1.0813e-01 6.9788e-03 lowCoverage 8.6158e-02 lowCoverage 0.8538296 0.9253731 -0.06906089 1 0.8597981 0.9572236 -0.0974255 9.9757e-01 1.0279e-04 lowCoverage 1.0000e+00 7.9071e-03 lowCoverage 9.7863e-01 1.3722e-03 lowCoverage 1.0000e+00 8.3646e-02 lowCoverage -1.2462e-01 5.8970e-04 lowCoverage 0.0460040 lowCoverage 0.8816901 0.7032520 0.18000501 5 0.8727716 0.6939348 0.1788368 2.3564e-06 9.9999e-01 weaklyHypermeth 2.4293e-05 1.0000e+00 weaklyHypermeth 8.5361e-03 9.9512e-01 weaklyHypermeth 6.7747e-02 1.0000e+00 weaklyHypermeth 0.1541815 4.3601e-04 lowCoverage 9.9093e-03 lowCoverage 0.8816901 0.9253731 -6.4146e-02 1 0.8727716 0.9572236 -0.08445193 9.9543e-01 2.5007e-03 lowCoverage 1.0000e+00 8.6231e-02 lowCoverage 8.1913e-01 4.3829e-03 lowCoverage 1.0000e+00 2.6680e-01 lowCoverage -0.07857259 0.01259604 lowCoverage 0.65768 lowCoverage 0.7032520 0.9253731 -0.19089767 1 0.6939348 0.9572236 -0.26328872 1.0000e+00 5.2239e-06 lowCoverage 1.0000e+00 7.4594e-05 lowCoverage 9.9999e-01 1.5227e-03 lowCoverage 1.0000000 1.9034e-02 lowCoverage -0.2327540 3.6355e-05 lowCoverage 0.00267485 lowCoverage chr19 56981050 56982050 53634 FPR2 ENSG00000171049 0.8832247 251 6 0.7297350 69 6 0.7326516 63 6 0.8596009 87 6 0.8089286 42 6 0.8171818 205 6 0.8240741 103 6 0.7400716 71 6 0.6674603 51 5 0.9177350 50 5 0.8236287 118 6 0.8974359 53 5 0.8856481 67 5 NA 0 0 0.8172322 94 6 0.6949074 48 5 0.8972728 72 6 0.79095928 125 6 0.8010234 85 6 0.8114649 171 6 0.8000000 46 5 0.8305556 52 6 0.8184965 113 6 0.9583333 17 0 0.9166667 18 0 0.8557480 105 6 0.8556548 28 3 0.9388889 26 3 0.8169192 66 6 0.82751482 136 6 0.8708995 109 6 0.7830808 276 6 0.7347222 58 5 0.6196773 73 6 0.7622555 130 6 0.8333333 55 6 0.815278 37 5 0.72461783 120 6 0.8844372 198 6 0.8174521 185 6 0.8532680 194 6 0.8465343 263 6 0.8275232 226 6 0.8858836 0.6829836 0.7225154 0.8546006 0.7979323 0.7918834 0.8296784 0.76592953 0.7503759 0.88309717 0.8229566 0.8603239 0.86573465 NA 0.7880151 0.69318348 0.9032922 0.8014656 0.83676131 0.7856702 0.7407895 0.82160088 0.8385614 0.94078947 0.8815789 0.8353412 0.8414427 0.9131579 0.8450957 0.81955369 0.85852478 0.7497812 0.7029057 0.6466938 0.7571548 8.2237e-01 0.8302632 0.7311059 0.8721802 0.7902037 0.8474523 0.8334429 0.8038592 3 0.8197260 0.8195565 -2.8376e-03 6 0.8191444 0.8270843 -0.00793989 7.9249e-01 3.2109e-01 insignificant 1.00000000 1.0000e+00 insignificant 9.9689e-01 9.7599e-03 weaklyHypometh 1.0000000 0.821220 insignificant -0.04552441 0.057600 lowCoverage 1 lowCoverage 0.8197260 0.7484144 0.06579651 6 0.8191444 0.7481618 0.0709826 2.6990e-03 9.9996e-01 weaklyHypermeth 1.6661e-02 1.0000e+00 weaklyHypermeth 1.9097e-02 9.9956e-01 weaklyHypermeth 1.3262e-01 1.0000e+00 insignificant 6.2225e-02 1.1565e-01 insignificant 7.0519e-01 insignificant 0.8197260 0.8461538 -0.02403576 6 0.8191444 0.8465207 -0.0273764 9.7379e-01 2.1506e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3309e-01 3.5323e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -3.5304e-02 9.5042e-02 insignificant 0.9461992 insignificant 0.8195565 0.7484144 0.06632412 6 0.8270843 0.7481618 0.0789225 7.2901e-04 9.9990e-01 weaklyHypermeth 5.3604e-03 1.0000e+00 weaklyHypermeth 3.3052e-04 9.9999e-01 weaklyHypermeth 3.7991e-03 1.0000e+00 weaklyHypermeth 0.1077492 1.5923e-02 lowCoverage 1.7121e-01 lowCoverage 0.8195565 0.8461538 -1.8876e-02 6 0.8270843 0.8465207 -0.01943646 9.2007e-01 3.4305e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.2948e-01 9.5087e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01022023 0.61372837 lowCoverage 1.00000 lowCoverage 0.7484144 0.8461538 -0.08439260 6 0.7481618 0.8465207 -0.09835893 9.9998e-01 1.8333e-03 weaklyHypometh 1.0000e+00 1.3888e-02 weaklyHypometh 9.9948e-01 7.2350e-03 weaklyHypometh 1.0000000 6.7617e-02 weaklyHypometh -0.0975289 2.4714e-02 weaklyHypometh 0.23993895 insignificant chr19 56981150 56982150 53635 FPR2 ENSG00000171049 0.8832247 251 6 0.7297350 69 6 0.7326516 63 6 0.8596009 87 6 0.8089286 42 6 0.8171818 205 6 0.8240741 103 6 0.7400716 71 6 0.6674603 51 5 0.9177350 50 5 0.8236287 118 6 0.8974359 53 5 0.8856481 67 5 NA 0 0 0.8172322 94 6 0.6949074 48 5 0.8972728 72 6 0.79095928 125 6 0.8010234 85 6 0.8114649 171 6 0.8000000 46 5 0.8305556 52 6 0.8184965 113 6 0.9583333 17 0 0.9166667 18 0 0.8557480 105 6 0.8556548 28 3 0.9388889 26 3 0.8169192 66 6 0.82751482 136 6 0.8708995 109 6 0.7830808 276 6 0.7347222 58 5 0.6196773 73 6 0.7622555 130 6 0.8333333 55 6 0.815278 37 5 0.72461783 120 6 0.8844372 198 6 0.8174521 185 6 0.8532680 194 6 0.8465343 263 6 0.8275232 226 6 0.8858836 0.6829836 0.7225154 0.8546006 0.7979323 0.7918834 0.8296784 0.76592953 0.7503759 0.88309717 0.8229566 0.8603239 0.86573465 NA 0.7880151 0.69318348 0.9032922 0.8014656 0.83676131 0.7856702 0.7407895 0.82160088 0.8385614 0.94078947 0.8815789 0.8353412 0.8414427 0.9131579 0.8450957 0.81955369 0.85852478 0.7497812 0.7029057 0.6466938 0.7571548 8.2237e-01 0.8302632 0.7311059 0.8721802 0.7902037 0.8474523 0.8334429 0.8038592 3 0.8197260 0.8195565 -2.8376e-03 6 0.8191444 0.8270843 -0.00793989 7.9249e-01 3.2109e-01 insignificant 1.00000000 1.0000e+00 insignificant 9.9689e-01 9.7599e-03 weaklyHypometh 1.0000000 0.821220 insignificant -0.04552441 0.057600 lowCoverage 1 lowCoverage 0.8197260 0.7484144 0.06579651 6 0.8191444 0.7481618 0.0709826 2.6990e-03 9.9996e-01 weaklyHypermeth 1.6661e-02 1.0000e+00 weaklyHypermeth 1.9097e-02 9.9956e-01 weaklyHypermeth 1.3262e-01 1.0000e+00 insignificant 6.2225e-02 1.1565e-01 insignificant 7.0519e-01 insignificant 0.8197260 0.8461538 -0.02403576 6 0.8191444 0.8465207 -0.0273764 9.7379e-01 2.1506e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3309e-01 3.5323e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -3.5304e-02 9.5042e-02 insignificant 0.9461992 insignificant 0.8195565 0.7484144 0.06632412 6 0.8270843 0.7481618 0.0789225 7.2901e-04 9.9990e-01 weaklyHypermeth 5.3604e-03 1.0000e+00 weaklyHypermeth 3.3052e-04 9.9999e-01 weaklyHypermeth 3.7991e-03 1.0000e+00 weaklyHypermeth 0.1077492 1.5923e-02 lowCoverage 1.7121e-01 lowCoverage 0.8195565 0.8461538 -1.8876e-02 6 0.8270843 0.8465207 -0.01943646 9.2007e-01 3.4305e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.2948e-01 9.5087e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01022023 0.61372837 lowCoverage 1.00000 lowCoverage 0.7484144 0.8461538 -0.08439260 6 0.7481618 0.8465207 -0.09835893 9.9998e-01 1.8333e-03 weaklyHypometh 1.0000e+00 1.3888e-02 weaklyHypometh 9.9948e-01 7.2350e-03 weaklyHypometh 1.0000000 6.7617e-02 weaklyHypometh -0.0975289 2.4714e-02 weaklyHypometh 0.23993895 insignificant chr19 57920250 57921250 53641 ZNF83 ENSG00000167766 0.8397631 1101 19 0.6196050 709 16 0.8086160 393 19 0.7281098 945 21 0.6090145 546 18 0.8808124 1215 21 0.6848803 628 17 0.8252490 484 16 0.7465812 469 23 0.7449984 457 21 0.8441445 804 18 0.6345173 300 16 0.7309051 448 17 0.7213417 447 21 0.7901713 577 18 0.6147037 357 18 0.6799825 99 5 0.68167484 1051 21 0.8610874 666 16 0.8812696 1020 21 0.6581894 211 16 0.8122597 187 11 0.7141410 571 23 0.6981597 188 14 0.8351028 422 18 0.8617822 773 16 0.7824273 464 18 0.6522762 217 11 0.7551242 636 17 0.76013585 890 18 0.8113192 891 18 0.8403004 1071 21 0.7434614 572 20 0.8663075 536 21 0.7114713 660 14 0.8690009 156 10 0.596028 402 18 0.74836336 768 18 0.9140158 1288 21 0.9131273 1074 21 0.9524812 1046 19 0.8386917 836 21 0.8716829 1148 21 0.8162486 0.7634790 0.7834678 0.8771593 0.6442502 0.8679787 0.7666678 0.80802690 0.7586168 0.79457355 0.8547726 0.6843877 0.77845697 0.7431531 0.7644377 0.67330743 0.6368826 0.8786360 0.82395518 0.8574842 0.8016779 0.81601748 0.7346752 0.80408558 0.8328097 0.7825468 0.7413373 0.7715018 0.7404139 0.84343700 0.81188489 0.8121143 0.7579740 0.7930807 0.7244343 7.6072e-01 0.7255499 0.8478938 0.8786248 0.8984333 0.9258582 0.8487422 0.8961743 11 0.8266583 0.8526251 -2.1685e-02 17 0.6120347 0.6289101 -0.01687545 2.9105e-01 2.2182e-01 insignificant 1.00000000 1.0000e+00 insignificant 9.5797e-01 1.1065e-01 insignificant 1.0000000 1.000000 insignificant -0.01873009 0.523355 insignificant 1 insignificant 0.8274640 0.8053670 0.03534913 18 0.6355133 0.6738892 -0.0383759 5.9815e-02 2.0689e-04 inconclusive 2.8215e-01 1.2930e-02 inconclusive 9.5781e-01 8.8874e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -9.4006e-03 8.4554e-01 insignificant 1.0000e+00 insignificant 0.8331085 0.9317507 -0.07902981 21 0.7581952 0.8457347 -0.0875394 1.0000e+00 1.2496e-06 weaklyHypometh 1.0000e+00 1.5620e-04 weaklyHypometh 9.9992e-01 1.0635e-04 weaklyHypometh 1.0000e+00 1.4678e-02 weaklyHypometh -1.5163e-01 1.0143e-04 weaklyHypometh 0.0202865 weaklyHypometh 0.8539360 0.8052410 0.05360014 17 0.6916894 0.6500797 0.0416097 1.7038e-01 4.7226e-01 insignificant 7.2196e-01 1.0000e+00 insignificant 7.4897e-01 8.6335e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0093295 8.4698e-01 insignificant 1.0000e+00 insignificant 0.8569003 0.9317507 -5.7230e-02 17 0.8002088 0.8457347 -0.04552583 1.0000e+00 3.6875e-06 weaklyHypometh 1.0000e+00 4.6094e-04 weaklyHypometh 9.2483e-01 1.2239e-02 weaklyHypometh 1.0000e+00 4.0632e-01 insignificant -0.13289828 0.00050204 weaklyHypometh 0.11415 insignificant 0.8106875 0.9319236 -0.11013995 18 0.7819196 0.8841771 -0.10225757 7.9684e-01 4.7765e-03 weaklyHypometh 1.0000e+00 3.2716e-02 weaklyHypometh 7.0897e-01 2.8539e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.1422277 1.7960e-02 weaklyHypometh 0.20794285 insignificant chr19 58014350 58015350 53642 ENSG00000213018 0.8184434 396 12 0.7087373 247 8 0.6880723 171 12 0.7881405 173 10 0.7903439 98 10 0.7896734 365 12 0.7852645 155 10 0.7596052 182 11 0.7875732 94 9 0.8272932 186 12 0.8251834 401 12 0.7725020 98 10 0.7546395 250 12 1.0000000 13 1 0.7734285 256 12 0.5813035 104 8 0.7363636 63 3 0.89182888 184 12 0.7684371 287 12 0.8385267 363 12 0.7839226 78 8 0.8413767 78 4 0.8310772 316 12 0.8583333 70 5 0.8877619 99 8 0.7648673 440 12 0.7884552 143 8 0.7464646 47 4 0.8168110 263 8 0.73828569 471 12 0.7998401 400 12 0.7872658 419 12 0.7621091 247 11 0.7359773 199 12 0.7036326 277 12 0.8209524 86 8 0.852525 66 6 0.82214223 342 12 0.8367458 340 12 0.8087853 373 12 0.8544723 280 10 0.8068127 320 10 0.8540810 321 11 0.8397732 0.7851317 0.7387768 0.8374990 0.8386591 0.8264483 0.8383259 0.72477794 0.8593739 0.85896100 0.8559407 0.7831449 0.80968722 NA 0.8240107 0.73831334 0.7594650 0.9029917 0.80013597 0.8425528 0.8108605 0.81958674 0.8161987 0.83571429 0.9007186 0.8222281 0.7562628 0.8273720 0.8391300 0.78590477 0.81443875 0.8393098 0.7579751 0.7004375 0.7061994 8.4661e-01 0.8664757 0.8510281 0.8587589 0.8673687 0.8795251 0.8659174 0.8707920 4 0.8125306 0.8576487 -6.5103e-03 12 0.7944267 0.8026946 -0.00826794 8.4079e-01 2.2275e-01 insignificant 1.00000000 1.0000e+00 insignificant 9.3761e-01 5.3589e-02 insignificant 1.0000000 1.000000 insignificant -0.01943711 0.392446 insignificant 1 insignificant 0.8125306 0.8069022 0.04001218 12 0.7944267 0.7753805 0.0190462 5.1999e-03 7.1084e-01 weaklyHypermeth 3.0409e-02 1.0000e+00 weaklyHypermeth 1.4303e-01 4.7298e-01 insignificant 7.4108e-01 1.0000e+00 insignificant 1.3782e-03 9.6395e-01 insignificant 1.0000e+00 insignificant 0.8125306 0.8066095 -0.04081232 12 0.7944267 0.8317636 -0.0373369 9.9677e-01 4.0814e-03 weaklyHypometh 1.0000e+00 1.2004e-01 insignificant 9.9995e-01 5.6940e-04 weaklyHypometh 1.0000e+00 4.7450e-02 weaklyHypometh -4.7911e-02 3.2609e-02 weaklyHypometh 0.5259566 insignificant 0.8576487 0.8069022 0.04818097 12 0.8026946 0.7753805 0.0273141 4.5998e-04 9.3386e-01 weaklyHypermeth 3.5383e-03 1.0000e+00 weaklyHypermeth 2.9984e-02 9.9032e-01 weaklyHypermeth 1.9859e-01 1.0000e+00 insignificant 0.0208153 4.6216e-01 insignificant 1.0000e+00 insignificant 0.8576487 0.8066095 -3.8328e-02 12 0.8026946 0.8317636 -0.02906895 9.4098e-01 5.2180e-04 weaklyHypometh 1.0000e+00 2.4848e-02 weaklyHypometh 8.9683e-01 1.0364e-02 weaklyHypometh 1.0000e+00 3.8384e-01 insignificant -0.02847429 0.11042471 insignificant 1.00000 insignificant 0.8069022 0.8066095 -0.08366797 12 0.7753805 0.8317636 -0.05638308 9.2445e-01 4.4435e-06 weaklyHypometh 1.0000e+00 6.4398e-05 weaklyHypometh 8.7860e-01 2.2732e-03 weaklyHypometh 1.0000000 2.6743e-02 weaklyHypometh -0.0492896 9.9226e-02 insignificant 0.63491662 insignificant chr19 58186050 58187050 53646 ZNF816A ENSG00000180257 0.8514451 445 5 0.7928753 463 6 0.6827151 102 5 0.8756204 187 5 0.7678419 107 6 0.8914694 607 6 0.4858611 169 6 0.6733481 92 5 0.6630682 108 5 0.6445578 49 4 0.8364739 280 6 0.8000000 33 4 0.7665801 104 5 0.8604497 47 4 0.8060897 109 4 0.6095571 40 3 0.9329403 2524 4 0.81756518 398 5 0.8290909 229 5 0.8692451 266 6 0.8607110 105 6 0.8500000 20 1 0.7900991 182 6 0.8245052 82 6 0.8185185 43 3 0.8766855 372 6 0.8373563 84 5 0.5770115 60 3 0.7580350 122 5 0.94530616 294 6 0.8911868 330 6 0.8796987 470 6 0.7685897 289 6 0.6930184 151 4 0.7154759 203 5 0.6250000 11 0 0.562336 193 6 0.49883517 387 6 0.9112255 636 6 0.9072661 499 6 0.8576062 400 5 0.8667923 290 5 0.8096521 391 6 0.8946643 0.8246791 0.8567952 0.9121396 0.8534722 0.8825558 0.8511692 0.89301113 0.8160371 0.94733216 0.8527773 0.9377778 0.93035017 0.8790564 0.9398504 0.59524087 0.9327888 0.8559176 0.86250168 0.9273040 0.8287455 NA 0.8597342 0.90128767 0.9495062 0.9118465 0.8784866 0.9195594 0.8986345 0.94764038 0.93230286 0.9040989 0.8075319 0.7938561 0.9528234 7.0703e-01 0.8353012 0.5317084 0.9313636 0.9300418 0.9140782 0.9240087 0.8758340 4 0.9064171 0.8972698 -2.6888e-03 6 0.6131334 0.6794905 -0.06635703 8.2615e-01 5.8858e-01 insignificant 1.00000000 1.0000e+00 insignificant 9.7023e-01 2.9824e-01 insignificant 1.0000000 1.000000 insignificant -0.05291976 0.160332 lowCoverage 1 lowCoverage 0.9065597 0.7487844 0.13900302 6 0.6897751 0.5015101 0.1882650 9.0509e-09 9.7562e-01 weaklyHypermeth 1.0524e-07 1.0000e+00 weaklyHypermeth 2.6104e-02 9.7685e-01 weaklyHypermeth 1.7705e-01 1.0000e+00 insignificant 1.2896e-01 2.5556e-02 lowCoverage 2.3445e-01 lowCoverage 0.9071159 0.9155756 -0.01362085 6 0.7597430 0.8801013 -0.1203583 9.2875e-01 3.7442e-02 weaklyHypometh 1.0000e+00 5.2678e-01 insignificant 9.9534e-01 6.8411e-02 insignificant 1.0000e+00 8.1441e-01 insignificant -9.7669e-02 5.6362e-03 lowCoverage 0.2167767 lowCoverage 0.8972222 0.7487844 0.14518659 6 0.6394268 0.5015101 0.1379167 6.7531e-06 9.9999e-01 weaklyHypermeth 6.4934e-05 1.0000e+00 weaklyHypermeth 8.2268e-03 9.9949e-01 weaklyHypermeth 6.5815e-02 1.0000e+00 weaklyHypermeth 0.1818835 4.6404e-03 lowCoverage 6.3567e-02 lowCoverage 0.8972698 0.9156137 -1.4620e-02 6 0.6810935 0.8950886 -0.21399516 8.5410e-01 3.1497e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.5219e-01 6.9149e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04474897 0.18892499 lowCoverage 1.00000 lowCoverage 0.7493917 0.9155756 -0.14968284 6 0.5731544 0.8801013 -0.30694684 9.9848e-01 1.8252e-04 weaklyHypometh 1.0000e+00 1.8252e-03 weaklyHypometh 9.4511e-01 1.5348e-02 weaklyHypometh 1.0000000 1.2580e-01 insignificant -0.2266325 1.6388e-03 lowCoverage 0.04682200 lowCoverage chr19 59053350 59054350 53650 NLRP12 ENSG00000142405 0.6705153 237 9 0.7107432 240 10 0.6305989 144 10 0.7561142 238 9 0.5890794 104 8 0.7822171 250 10 0.4945856 128 6 0.6119268 172 9 0.6017308 107 9 0.7731935 87 4 0.7165379 293 11 0.6363636 55 4 0.6986990 130 9 0.8608392 61 5 0.7257964 115 6 0.7137566 41 3 0.9818182 63 4 0.79282090 269 11 0.6593407 127 10 0.7802945 194 10 0.6760204 63 4 0.7821068 47 2 0.6138981 172 11 0.7638889 95 4 0.6917754 72 4 0.7563060 297 10 0.7909357 91 5 0.7100330 68 4 0.7267647 131 6 0.73920755 215 10 0.7940668 241 10 0.7641457 229 10 0.4184402 256 10 0.4123094 118 10 0.4844444 316 9 0.3750000 22 1 0.434280 124 6 0.55598813 238 10 0.8080346 228 10 0.6096022 248 10 0.8090245 230 10 0.7921629 162 4 0.6477346 268 10 0.8877744 0.6884732 0.7727710 0.8978732 0.8731760 0.8579235 0.7008621 0.82539294 0.7700739 0.91204657 0.8852473 0.7922824 0.86976233 0.9226601 0.8332807 0.78826497 0.9200086 0.6787651 0.88288914 0.8713952 0.8319845 0.75173274 0.7989582 0.96305419 0.8029834 0.8333912 0.9020180 0.8540592 0.7461755 0.90631760 0.86133062 0.8809027 0.3052315 0.3071316 0.3533662 2.6161e-01 0.3910685 0.3127248 0.8537841 0.7652891 0.8438826 0.8207002 0.7181370 3 0.7936352 0.8274259 -3.3797e-02 10 0.6700144 0.6864409 -0.01642651 9.9158e-01 1.8735e-01 insignificant 1.00000000 1.0000e+00 insignificant 9.9629e-01 5.0781e-01 insignificant 1.0000000 1.000000 insignificant -0.02474716 0.393007 insignificant 1 insignificant 0.7933749 0.2830540 0.46064905 10 0.6285569 0.4656916 0.1628653 1.5705e-29 9.7163e-01 hypermethylated 7.1384e-28 1.0000e+00 hypermethylated 7.4770e-06 9.6983e-01 hypermethylated 1.1329e-04 1.0000e+00 hypermethylated 2.6260e-01 3.0950e-06 hypermethylated 1.1054e-04 hypermethylated 0.7955892 0.7860915 0.02878461 9 0.7223265 0.7253509 -0.0030244 6.2984e-01 6.0674e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.5953e-01 6.4252e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -2.3963e-02 6.4338e-01 insignificant 1.0000000 insignificant 0.8272251 0.2823858 0.52091812 10 0.6446330 0.4300711 0.2145620 1.2329e-31 9.9998e-01 hypermethylated 8.8066e-30 1.0000e+00 hypermethylated 8.4607e-06 9.9989e-01 hypermethylated 1.5964e-04 1.0000e+00 hypermethylated 0.2873521 7.8669e-06 hypermethylated 3.5759e-04 hypermethylated 0.8313817 0.7860915 6.5123e-02 9 0.7267133 0.7253509 0.00136239 9.0870e-02 5.6247e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.5871e-01 8.6853e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00078398 0.98703646 insignificant 1.00000 insignificant 0.2823640 0.7860915 -0.48913992 9 0.4654666 0.7253509 -0.25988431 9.9488e-01 1.8895e-18 hypomethylated 1.0000e+00 1.2597e-16 hypomethylated 9.9640e-01 1.8054e-05 hypomethylated 1.0000000 4.8487e-04 hypomethylated -0.2865681 8.6442e-04 hypomethylated 0.02980762 hypomethylated chr19 59173850 59174850 53651 MIR935 ENSG00000142408 0.0000000 55 3 0.0550142 195 5 0.0272894 267 5 0.0000000 3 0 0.0403030 172 5 0.0090909 68 5 0.0498933 347 5 0.0027778 219 5 0.0176207 248 5 0.0519048 179 5 0.0407807 202 5 0.0416195 278 5 0.0244898 175 5 NA 0 0 0.0045455 231 5 0.0474411 209 5 0.0050000 324 5 0.06666667 15 3 0.0097561 200 5 0.0000000 89 5 0.0200000 56 4 0.0000000 17 1 0.0936783 126 5 0.0945513 56 4 NA 0 0 0.0000000 237 5 0.0335664 78 5 0.0757576 85 5 0.0917007 189 5 0.00826900 272 5 0.0175439 234 5 0.0270594 204 5 0.0145238 225 5 0.0038462 184 5 0.0000000 58 4 0.0333333 19 2 0.000000 40 4 0.02735493 179 5 0.0142857 54 3 0.0222222 93 5 0.0000000 8 0 0.0000000 20 2 0.0000000 6 0 0.0000000 0.0469353 0.0189691 0.0000000 0.0231169 0.0220779 0.0358862 0.00674603 0.0189835 0.04166048 0.0380161 0.0485102 0.02099125 NA 0.0038961 0.07209235 0.0042857 0.0342857 0.00836237 0.0000000 0.0000000 0.02140726 0.0769048 0.08750000 NA 0.0000000 0.0155844 0.0792208 0.0489925 0.01070019 0.01503759 0.0166256 0.0197959 0.0065934 0.0020879 8.0952e-02 0.0000000 0.0118180 0.0244898 0.0000000 0.0000000 0.0000000 0.0000000 0 0.0310702 0.0315315 -2.7869e-03 5 0.0272528 0.0334633 -0.00621051 8.8156e-01 2.9466e-01 insignificant 1.00000000 1.0000e+00 insignificant 9.1433e-01 2.9847e-01 insignificant 1.0000000 1.000000 insignificant -0.01600132 0.231190 lowCoverage 1 lowCoverage 0.0310702 0.0127660 0.01596470 5 0.0272528 0.0115224 0.0157304 6.5818e-02 9.3296e-01 insignificant 3.0192e-01 1.0000e+00 insignificant 1.2964e-01 9.5561e-01 insignificant 6.8764e-01 1.0000e+00 insignificant 1.2834e-02 1.2372e-01 lowCoverage 7.4076e-01 lowCoverage 0.0310702 0.0110497 0.01959402 3 0.0272528 0.0171795 0.0100733 1.7658e-02 3.0987e-01 lowCoverage 3.2151e-01 1.0000e+00 lowCoverage 1.4232e-02 9.6502e-01 lowCoverage 3.7872e-01 1.0000e+00 lowCoverage 1.8709e-02 1.6392e-02 lowCoverage 0.3345266 lowCoverage 0.0315315 0.0127660 0.01883316 5 0.0334633 0.0115224 0.0219409 1.1559e-01 9.5530e-01 insignificant 5.0699e-01 1.0000e+00 insignificant 7.3415e-02 9.6291e-01 insignificant 4.2683e-01 1.0000e+00 insignificant 0.0288351 4.5264e-02 lowCoverage 3.3282e-01 lowCoverage 0.0315315 0.0110497 2.1769e-02 3 0.0334633 0.0171795 0.01628383 9.9993e-02 7.9024e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 1.8593e-02 9.8720e-01 lowCoverage 5.7726e-01 1.0000e+00 lowCoverage 0.03470991 0.01675827 lowCoverage 0.68667 lowCoverage 0.0127660 0.0110497 0.00221855 3 0.0115224 0.0171795 -0.00565708 2.9205e-01 6.3339e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 2.3924e-01 9.6730e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage 0.0058748 4.5425e-01 lowCoverage 1.00000000 lowCoverage chr19 59404250 59405250 53654 ENSG00000218009 0.7331367 271 9 0.3942454 210 8 0.4919842 208 8 0.7785811 284 8 0.8886262 119 8 0.5835935 365 8 0.6361046 175 8 0.5769840 219 7 0.6157884 268 7 0.5845544 244 8 0.6132034 233 8 0.5645854 123 8 0.5196581 352 8 0.6232639 136 6 0.6399706 264 8 0.4671104 82 6 0.5946409 53 6 0.67133325 318 8 0.5847242 164 8 0.4788287 239 9 0.7606061 83 9 0.4991106 139 8 0.7085198 227 8 0.6320025 79 7 0.4236914 122 5 0.6400914 318 8 0.4363139 154 8 0.5441889 166 7 0.5942681 245 8 0.62304521 302 8 0.4597632 219 8 0.7695510 272 7 0.4044758 269 8 0.3929979 112 8 0.2512963 181 6 0.3026316 45 2 0.389948 208 6 0.77110756 240 7 0.7297065 253 6 0.7939412 215 9 0.8786431 172 6 0.7976801 223 6 0.7381525 224 8 0.6951135 0.5837056 0.5372337 0.7001426 0.9007225 0.7149069 0.7218863 0.68848524 0.7193984 0.64598482 0.7864246 0.5581263 0.59962869 0.6805921 0.6968158 0.46627543 0.5136043 0.6599592 0.54562754 0.6230352 0.7339322 0.71920940 0.7351918 0.70832413 0.6073583 0.6333922 0.5314317 0.6497335 0.7114201 0.70228187 0.70297432 0.8259701 0.5185423 0.4508761 0.1601629 4.0626e-01 0.6150472 0.8962843 0.6356984 0.8131087 0.7169546 0.7005332 0.6531682 5 0.6555710 0.6633706 -1.1726e-02 8 0.5419414 0.6441061 -0.10216462 7.2751e-01 3.8211e-01 insignificant 1.00000000 1.0000e+00 insignificant 9.7806e-01 4.0041e-01 insignificant 1.0000000 1.000000 insignificant 0.01111653 0.797469 insignificant 1 insignificant 0.6521432 0.5658768 0.09972604 7 0.4720730 0.3796900 0.0923830 2.4174e-03 9.4653e-01 weaklyHypermeth 1.5109e-02 1.0000e+00 weaklyHypermeth 4.3655e-02 9.8990e-01 weaklyHypermeth 2.7115e-01 1.0000e+00 insignificant 1.8330e-01 5.7746e-02 insignificant 4.3094e-01 insignificant 0.6591865 0.6940092 -0.01539281 6 0.6761057 0.7298108 -0.0537052 7.6257e-01 3.7710e-02 weaklyHypometh 1.0000e+00 5.2678e-01 insignificant 9.8832e-01 6.8859e-03 weaklyHypometh 1.0000e+00 2.2212e-01 insignificant -1.8558e-01 2.6240e-04 weaklyHypometh 0.0333320 weaklyHypometh 0.6623545 0.5658768 0.11331428 7 0.5346002 0.3796900 0.1549102 3.2410e-02 9.1564e-01 weaklyHypermeth 1.6793e-01 1.0000e+00 insignificant 1.9018e-02 9.9275e-01 weaklyHypermeth 1.3488e-01 1.0000e+00 insignificant 0.1721865 7.3619e-02 insignificant 4.7496e-01 insignificant 0.6716549 0.6940092 6.7484e-03 6 0.6928880 0.7298108 -0.03692284 4.2478e-01 2.3506e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.1975e-01 1.8388e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.19669534 0.00049038 weaklyHypometh 0.11415 insignificant 0.5717036 0.6663296 -0.11830220 6 0.5086629 0.6674718 -0.15880890 8.6128e-01 2.7710e-02 weaklyHypometh 1.0000e+00 1.5394e-01 insignificant 9.9940e-01 4.9192e-03 weaklyHypometh 1.0000000 5.0196e-02 weaklyHypometh -0.3688818 3.1748e-03 weaklyHypometh 0.06754963 weaklyHypometh chr19 60201450 60202450 53657 ENSG00000203310 0.8197052 171 10 0.7361944 191 11 0.7777977 261 8 0.9247621 166 8 0.7250686 262 9 0.7101008 325 11 0.7282065 738 8 0.7315228 139 9 0.7736909 220 5 0.7764262 151 5 0.7776166 181 9 0.8656109 353 5 0.7952619 152 8 0.7500000 4 0 0.9261403 362 5 0.8535690 204 4 0.8747826 221 4 0.88464893 186 11 0.7659897 115 8 0.8489243 266 12 0.7449495 66 4 0.7992424 57 5 0.7901638 196 11 0.7639744 71 6 0.8383333 75 5 0.7551385 231 12 0.7686588 120 9 0.6755159 80 9 0.7400183 97 8 0.77754660 248 12 0.7718901 174 12 0.7856315 326 11 0.6297101 183 12 0.7189580 182 9 0.6572378 172 9 0.7830862 88 7 0.852801 122 6 0.72202724 156 10 0.8090512 305 11 0.8496495 212 10 0.9533583 194 8 0.8632231 217 11 0.8319471 203 11 0.9199755 0.7666297 0.7522276 0.9596197 0.8523954 0.8111706 0.8572723 0.83459185 0.8779849 0.89306036 0.8810594 0.8483837 0.91793899 NA 0.9221599 0.95345060 0.9140408 0.9184595 0.86141140 0.9371252 0.8092908 0.89790423 0.9036232 0.87656250 0.9444444 0.8644372 0.8784107 0.7953063 0.8428819 0.87067551 0.83599168 0.8886257 0.6879991 0.7977262 0.7072135 8.5391e-01 0.8585990 0.8330118 0.9457532 0.9022811 0.9577722 0.9065187 0.8755772 2 0.8888175 0.8380241 1.6246e-02 9 0.8023393 0.7682542 0.03408514 1.0127e-01 6.7354e-01 insignificant 1.00000000 1.0000e+00 insignificant 3.7156e-01 3.1028e-01 insignificant 1.0000000 1.000000 insignificant 0.03471239 0.076676 insignificant 1 insignificant 0.8888175 0.7641196 0.09867386 9 0.8023393 0.7101391 0.0922002 1.1790e-06 1.0000e+00 weaklyHypermeth 1.1018e-05 1.0000e+00 weaklyHypermeth 1.2030e-02 9.9997e-01 weaklyHypermeth 9.1757e-02 1.0000e+00 weaklyHypermeth 7.4998e-02 7.8859e-02 insignificant 5.5534e-01 insignificant 0.8888175 0.9213086 -0.03799590 9 0.8023393 0.8493289 -0.0469896 9.9989e-01 9.5063e-04 weaklyHypometh 1.0000e+00 4.5268e-02 weaklyHypometh 9.9997e-01 2.7900e-03 weaklyHypometh 1.0000e+00 1.2131e-01 insignificant -5.9145e-02 7.8718e-02 insignificant 0.8532225 insignificant 0.8380241 0.7641196 0.07763759 9 0.7682542 0.7101391 0.0581151 1.5202e-03 9.9917e-01 weaklyHypermeth 1.0412e-02 1.0000e+00 weaklyHypermeth 3.8219e-02 9.9969e-01 weaklyHypermeth 2.4343e-01 1.0000e+00 insignificant 0.0402852 2.9517e-01 insignificant 1.0000e+00 insignificant 0.8380241 0.9213086 -5.6905e-02 9 0.7682542 0.8493289 -0.08107470 9.9891e-01 5.1896e-04 weaklyHypometh 1.0000e+00 2.4848e-02 weaklyHypometh 9.8345e-01 6.8645e-03 weaklyHypometh 1.0000e+00 2.9845e-01 insignificant -0.09385726 0.01446887 weaklyHypometh 0.65768 insignificant 0.7641196 0.9213086 -0.14417900 10 0.7101391 0.8493289 -0.13918980 1.0000e+00 2.3153e-06 weaklyHypometh 1.0000e+00 3.5620e-05 weaklyHypometh 1.0000e+00 1.1162e-03 weaklyHypometh 1.0000000 1.4883e-02 weaklyHypometh -0.1341424 1.0748e-02 weaklyHypometh 0.15353857 insignificant chr19 60375250 60376250 53658 ENSG00000210696 0.6909099 319 11 0.5868634 153 10 0.6137212 172 11 0.7587903 218 11 0.6102564 66 6 0.7046768 380 11 0.5625000 132 11 0.6450146 174 11 0.4848333 146 9 0.6179058 159 11 0.6648006 299 11 0.7120523 83 6 0.6340012 180 11 0.6000000 41 3 0.6321644 153 11 0.4865079 75 7 0.5848485 72 7 0.64654875 192 11 0.6677457 231 11 0.5487690 405 11 0.7122792 69 5 0.7740319 111 9 0.7971218 208 11 0.6873016 82 7 0.8080152 105 11 0.6082863 229 11 0.5926873 94 9 0.5227273 56 6 0.6286056 180 9 0.70857615 249 11 0.7266798 260 11 0.6568521 386 11 0.7279823 181 10 0.6152901 198 11 0.6185467 194 11 0.5989057 105 6 0.734576 115 10 0.68039847 243 11 0.7087783 339 11 0.7472596 342 11 0.7307487 209 11 0.7170279 265 11 0.6926647 317 11 0.7412111 0.7113956 0.6797027 0.8090319 0.7289352 0.8163354 0.6814236 0.72893577 0.6759578 0.78183509 0.7345286 0.7071628 0.71951945 0.7421815 0.7286322 0.56463294 0.6717620 0.7964344 0.79378638 0.7364616 0.8210307 0.74794536 0.7881541 0.80331515 0.8402026 0.7456623 0.6823776 0.6593754 0.7376534 0.81572535 0.75122452 0.7767776 0.7210455 0.6679722 0.7045716 6.4396e-01 0.7569597 0.7239900 0.7837528 0.8057720 0.8061859 0.7929698 0.8177733 5 0.7201973 0.7437161 -2.1938e-02 11 0.5924316 0.5944870 -0.00205533 9.4917e-01 1.1447e-01 insignificant 1.00000000 1.0000e+00 insignificant 9.9329e-01 4.3773e-02 weaklyHypometh 1.0000000 1.000000 insignificant -0.06261817 0.047537 weaklyHypometh 1 insignificant 0.7222986 0.6940154 0.02695061 11 0.6653619 0.7164740 -0.0511121 1.8396e-01 4.8285e-01 insignificant 7.9958e-01 1.0000e+00 insignificant 4.0930e-01 7.4347e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -3.9971e-02 2.0075e-01 insignificant 1.0000e+00 insignificant 0.7213971 0.7853261 -0.04824539 11 0.6037781 0.6614645 -0.0576864 9.9811e-01 9.4806e-03 weaklyHypometh 1.0000e+00 2.2573e-01 insignificant 9.9912e-01 1.8158e-03 weaklyHypometh 1.0000e+00 8.8916e-02 weaklyHypometh -9.6650e-02 2.5889e-05 weaklyHypometh 0.0086296 weaklyHypometh 0.7460396 0.6940154 0.04719057 11 0.6570852 0.7164740 -0.0593888 6.7108e-02 9.3954e-01 insignificant 3.1655e-01 1.0000e+00 insignificant 8.6423e-02 9.9555e-01 insignificant 4.8827e-01 1.0000e+00 insignificant 0.0226471 5.2921e-01 insignificant 1.0000e+00 insignificant 0.7444279 0.7853261 -2.9265e-02 11 0.6299701 0.6614645 -0.03149436 7.4081e-01 1.6082e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.7415e-01 8.3469e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03403216 0.22565174 insignificant 1.00000 insignificant 0.6931268 0.7858600 -0.07734370 11 0.6455925 0.7165865 -0.07099401 9.7344e-01 4.4162e-05 weaklyHypometh 1.0000e+00 5.1955e-04 weaklyHypometh 9.9331e-01 2.9373e-04 weaklyHypometh 1.0000000 5.2306e-03 weaklyHypometh -0.0566793 7.1120e-02 insignificant 0.50930338 insignificant chr19 60499650 60500650 53661 BRSK1 ENSG00000160469 0.7672687 328 10 0.6567678 188 10 0.6082280 177 10 0.8151845 233 10 0.7924111 143 10 0.8252254 488 10 0.7803505 130 10 0.7181502 153 9 0.8088570 145 9 0.8311594 130 9 0.7954489 404 14 0.7735636 74 6 0.8239696 159 9 0.7702381 73 6 0.7475056 130 8 0.7727778 84 6 0.7240646 70 5 0.75156067 236 10 0.8385740 201 10 0.8099366 351 14 0.7609768 79 5 0.8162840 118 8 0.7507684 181 9 0.7274107 89 7 0.8157832 86 8 0.8511106 261 10 0.8458853 115 7 0.9000000 56 4 0.7990288 120 6 0.68804107 243 10 0.8077725 245 10 0.7800385 490 14 0.8211482 162 9 0.6351567 168 10 0.5495572 350 10 0.6412121 74 8 0.779844 123 9 0.70049007 231 10 0.8169944 301 10 0.6842225 317 10 0.7610507 257 10 0.7778053 237 9 0.8262730 293 10 0.8088124 0.7408744 0.7070060 0.8138387 0.8060407 0.8115892 0.7913855 0.82516904 0.7962002 0.81770848 0.7976874 0.8297595 0.86614792 0.8510207 0.7995233 0.80111301 0.7955194 0.8365064 0.81901452 0.8162087 0.8270443 0.80504933 0.8007396 0.77960606 0.8494052 0.8346131 0.8141994 0.8904110 0.7889495 0.74281482 0.78153435 0.8312783 0.7838144 0.7110162 0.7869872 6.5727e-01 0.7033955 0.7121239 0.8278338 0.8380955 0.8075993 0.8546096 0.8540109 4 0.7790608 0.7839654 2.1150e-03 10 0.7768531 0.8018268 -0.02497374 6.3078e-01 2.6692e-01 insignificant 1.00000000 1.0000e+00 insignificant 8.0595e-01 1.3959e-01 insignificant 1.0000000 1.000000 insignificant -0.02469622 0.258029 insignificant 1 insignificant 0.7790608 0.7229242 0.05950668 10 0.7768531 0.7381509 0.0387022 1.5461e-03 9.9488e-01 weaklyHypermeth 1.0105e-02 1.0000e+00 weaklyHypermeth 1.2112e-02 9.6095e-01 weaklyHypermeth 9.1757e-02 1.0000e+00 weaklyHypermeth 8.2661e-02 1.0286e-01 insignificant 6.6363e-01 insignificant 0.7788906 0.8056940 -0.03336974 10 0.7619766 0.7812362 -0.0192595 9.7417e-01 4.4793e-02 weaklyHypometh 1.0000e+00 5.8172e-01 insignificant 9.8512e-01 1.0092e-01 insignificant 1.0000e+00 9.9997e-01 insignificant -2.7071e-03 9.2730e-01 insignificant 1.0000000 insignificant 0.7839654 0.7229242 0.05599423 10 0.8018268 0.7381509 0.0636759 2.5297e-02 9.9987e-01 weaklyHypermeth 1.3385e-01 1.0000e+00 insignificant 2.0421e-02 9.9998e-01 weaklyHypermeth 1.4381e-01 1.0000e+00 insignificant 0.1073570 4.7304e-02 weaklyHypermeth 3.4032e-01 insignificant 0.7836538 0.8056940 -3.6887e-02 10 0.7886153 0.7812362 0.00737913 8.8945e-01 4.8942e-02 weaklyHypometh 1.0000e+00 7.3048e-01 insignificant 7.1024e-01 3.9039e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02198915 0.49040167 insignificant 1.00000 insignificant 0.7226739 0.8056940 -0.09527888 10 0.7206943 0.7812362 -0.06054187 9.9936e-01 1.7935e-03 weaklyHypometh 1.0000e+00 1.3796e-02 weaklyHypometh 9.9948e-01 3.1467e-02 weaklyHypometh 1.0000000 2.2005e-01 insignificant -0.0853678 1.1416e-01 insignificant 0.70907379 insignificant chr19 60504650 60505650 53662 BRSK1 ENSG00000160469 0.1549385 655 13 0.1232170 398 13 0.1107670 429 13 0.1374904 718 13 0.1557143 229 14 0.1442929 650 13 0.1604628 358 13 0.1450031 382 10 0.0052265 455 10 0.1973214 326 10 0.1787822 441 13 0.0032468 264 10 0.0029326 324 10 0.7500000 8 0 0.0941610 437 10 0.0000000 144 10 0.0053571 327 10 0.12967223 820 13 0.1559592 308 13 0.1034583 549 13 0.1349206 133 12 0.1791486 351 13 0.1564954 480 10 0.0000000 232 10 0.1241696 396 17 0.1676245 599 17 0.0696970 234 10 0.1931818 113 10 0.1370976 323 10 0.17074716 548 10 0.1252666 448 13 0.1334746 624 13 0.0067356 212 13 0.0245342 271 13 0.0875697 339 8 0.0296703 117 12 0.057143 150 11 0.01051617 564 17 0.1119769 690 13 0.1618491 812 13 0.1924289 663 13 0.1474395 718 13 0.1336517 734 13 0.0097757 0.0107942 0.0074433 0.0124287 0.0050305 0.0098476 0.0225091 0.01058723 0.0062463 0.01003874 0.0101030 0.0036476 0.00275374 NA 0.0065162 0.00000000 0.0054878 0.0122862 0.00788011 0.0081419 0.0000000 0.00505109 0.0182658 0.00000000 0.0131355 0.0020238 0.0049196 0.0106707 0.0123176 0.00714802 0.00891757 0.0110564 0.0093837 0.0051034 0.0070368 8.5366e-03 0.0000000 0.0018914 0.0112103 0.0106249 0.0065116 0.0071932 0.0071111 10 0.0458693 0.0435365 7.4364e-05 13 0.1124537 0.1897190 -0.07726529 9.6390e-01 9.7258e-01 insignificant 1.00000000 1.0000e+00 insignificant 9.4700e-01 9.8514e-01 insignificant 1.0000000 1.000000 insignificant 0.00524820 0.892786 insignificant 1 insignificant 0.0458637 0.0133414 0.05351757 13 0.1075644 0.0835869 0.0239775 1.3485e-07 9.3485e-01 weaklyHypermeth 1.3760e-06 1.0000e+00 weaklyHypermeth 1.4187e-02 9.9889e-01 weaklyHypermeth 1.0509e-01 1.0000e+00 insignificant 1.0187e-01 1.2542e-02 weaklyHypermeth 1.3833e-01 insignificant 0.0459153 0.0411944 0.00049825 13 0.1126657 0.1462193 -0.0335536 9.2483e-01 3.5342e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7576e-01 5.1307e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -1.1569e-02 7.6291e-01 insignificant 1.0000000 insignificant 0.0435365 0.0133333 0.04543487 13 0.1897190 0.0873863 0.1023327 8.4950e-05 9.9782e-01 weaklyHypermeth 7.6532e-04 1.0000e+00 weaklyHypermeth 2.0069e-01 9.9998e-01 insignificant 9.3780e-01 1.0000e+00 insignificant 0.0966238 1.8803e-04 weaklyHypermeth 4.9482e-03 weaklyHypermeth 0.0428059 0.0412400 1.9444e-05 13 0.1278716 0.1634215 -0.03554990 9.6000e-01 2.4783e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8355e-01 4.3285e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01681726 0.42456437 insignificant 1.00000 insignificant 0.0116066 0.0412172 -0.06392473 13 0.0155356 0.1543426 -0.13880697 1.0000e+00 9.8723e-07 weaklyHypometh 1.0000e+00 1.6733e-05 weaklyHypometh 1.0000e+00 8.1631e-03 weaklyHypometh 1.0000000 7.4210e-02 weaklyHypometh -0.1134411 1.9729e-04 weaklyHypometh 0.00939453 weaklyHypometh chr19 60529750 60530750 53664 BRSK1 ENSG00000160469 0.7271359 743 20 0.7042334 413 19 0.6123143 293 20 0.7744880 577 20 0.7048137 239 19 0.7325226 1023 20 0.6827446 293 15 0.7189781 289 16 0.7189390 179 16 0.7875094 207 15 0.6664543 484 20 0.6501404 157 10 0.6390504 302 16 0.8029001 180 15 0.7125734 193 16 0.4850160 110 6 0.6423072 1030 14 0.69103888 496 20 0.5784557 366 16 0.8168832 946 22 0.7176087 161 12 0.7102186 291 12 0.7320294 429 25 0.7087189 416 16 0.6065759 330 15 0.7444455 465 20 0.6184441 430 16 0.7685981 169 11 0.7478543 274 15 0.72497128 468 20 0.7601264 464 20 0.6718424 808 19 0.7495858 267 19 0.5711989 213 16 0.6389764 439 20 0.5581286 256 15 0.618329 387 19 0.63840678 487 20 0.7343292 649 19 0.8289540 601 19 0.6315043 603 21 0.7362699 595 24 0.7728091 658 20 0.7193546 0.7210219 0.6885378 0.8184197 0.7670324 0.7450324 0.7192186 0.72650497 0.7168265 0.79807263 0.7700731 0.6994225 0.77807774 0.8193472 0.7755383 0.64878944 0.7383153 0.7475071 0.76808695 0.7499517 0.7905600 0.73389770 0.7476310 0.76102994 0.7049303 0.7772466 0.7374827 0.7842932 0.7741650 0.74501618 0.77962677 0.7412190 0.6884119 0.6184482 0.6427245 5.4979e-01 0.7143812 0.6832719 0.7550379 0.7959699 0.7737480 0.7570013 0.7849859 11 0.7534922 0.7634546 -5.0207e-04 19 0.6547604 0.7057204 -0.05095999 6.6976e-01 3.3431e-01 insignificant 1.00000000 1.0000e+00 insignificant 7.9927e-01 6.5320e-01 insignificant 1.0000000 1.000000 insignificant -0.01686121 0.473251 insignificant 1 insignificant 0.7538480 0.6774036 0.08073029 19 0.6962349 0.6639802 0.0322547 1.5016e-07 9.9510e-01 weaklyHypermeth 1.5167e-06 1.0000e+00 weaklyHypermeth 2.7523e-05 9.9985e-01 weaklyHypermeth 3.5286e-04 1.0000e+00 weaklyHypermeth 6.3321e-02 8.5310e-02 insignificant 5.7359e-01 insignificant 0.7540327 0.8058596 -0.02270936 19 0.6709384 0.6722843 -0.0013458 9.0119e-01 1.3454e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4524e-01 1.6750e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -4.8348e-02 2.3224e-01 insignificant 1.0000000 insignificant 0.7634157 0.6774036 0.08093161 19 0.7000069 0.6639802 0.0360267 5.2334e-07 9.9697e-01 weaklyHypermeth 5.6274e-06 1.0000e+00 weaklyHypermeth 5.9467e-05 9.9968e-01 weaklyHypermeth 8.4953e-04 1.0000e+00 weaklyHypermeth 0.0801819 3.4801e-02 weaklyHypermeth 2.7208e-01 insignificant 0.7632365 0.8058596 -1.9506e-02 19 0.6900071 0.6722843 0.01772286 5.0299e-01 1.0957e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.9565e-01 4.6605e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03148717 0.41127338 insignificant 1.00000 insignificant 0.6789396 0.8057345 -0.10506882 19 0.6886924 0.6488760 0.03981635 1.0000e+00 1.3040e-07 weaklyHypometh 1.0000e+00 2.4603e-06 weaklyHypometh 9.9992e-01 9.0081e-07 weaklyHypometh 1.0000000 4.0946e-05 weaklyHypometh -0.1116691 2.9237e-02 weaklyHypometh 0.26822539 insignificant chr19 60562350 60563350 53666 FAM71E2 ENSG00000180043 0.6716795 275 8 0.7389911 334 9 0.6900303 215 8 0.6958033 282 7 0.7009259 145 8 0.8219170 442 9 0.7765789 247 9 0.6888087 226 8 0.6939862 199 8 0.7607060 162 5 0.7770396 288 9 0.7774327 73 5 0.7892900 214 6 0.7694419 118 7 0.6944829 184 8 0.6807692 48 5 0.6800000 30 3 0.79465176 487 7 0.7286358 414 8 0.7792239 422 9 0.7739336 126 8 0.5869565 72 4 0.7883385 274 9 0.8713043 108 9 0.7500372 187 7 0.8064030 419 10 0.7507257 218 9 0.7537879 61 3 0.7673687 409 8 0.80433403 424 9 0.7391166 399 7 0.7728961 500 9 0.5395574 278 10 0.6160547 304 8 0.6826292 265 7 0.6563908 227 7 0.521924 240 9 0.56411869 434 9 0.7032855 308 7 0.7353790 306 8 0.6766907 244 7 0.7355170 371 7 0.7751593 224 7 0.7781459 0.6887890 0.7600645 0.7828843 0.7376809 0.8010567 0.7568768 0.74151201 0.7097884 0.79067147 0.7667324 0.7481305 0.81777865 0.7616556 0.7428801 0.74579725 0.7054941 0.7603561 0.75175891 0.7832079 0.7743331 0.75532941 0.7898981 0.86366254 0.7847349 0.8000560 0.7680063 0.7758128 0.7555973 0.81683657 0.80613730 0.8017440 0.6596887 0.7856595 0.5810936 7.5103e-01 0.7276540 0.5476104 0.7606802 0.7935978 0.7457263 0.7464893 0.7878890 4 0.7877968 0.8432906 -3.6363e-02 8 0.7509981 0.7856359 -0.03463780 9.8204e-01 8.2128e-04 weaklyHypometh 1.00000000 1.6426e-01 insignificant 9.1555e-01 1.6580e-02 weaklyHypometh 1.0000000 0.978635 insignificant -0.02824711 0.213192 insignificant 1 insignificant 0.7878409 0.6218535 0.17208504 8 0.7736346 0.5383013 0.2353333 1.1697e-12 9.9733e-01 weaklyHypermeth 1.9825e-11 1.0000e+00 weaklyHypermeth 3.3064e-04 9.8599e-01 weaklyHypermeth 3.4087e-03 1.0000e+00 weaklyHypermeth 1.3874e-01 2.1288e-03 weaklyHypermeth 3.2751e-02 weaklyHypermeth 0.7877968 0.7611838 0.02272844 7 0.7509981 0.7304581 0.0205400 1.0146e-01 3.5567e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.8106e-01 2.3128e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.0313e-02 6.1667e-01 insignificant 1.0000000 insignificant 0.8432906 0.6225659 0.21385019 8 0.7856359 0.5921314 0.1935044 1.0315e-15 9.9997e-01 hypermethylated 2.5787e-14 1.0000e+00 hypermethylated 4.5046e-05 9.9978e-01 hypermethylated 6.7233e-04 1.0000e+00 hypermethylated 0.1669877 4.3132e-04 weaklyHypermeth 9.9093e-03 weaklyHypermeth 0.8432906 0.7611838 6.0784e-02 7 0.7856359 0.7304581 0.05517779 1.2389e-05 3.3090e-01 weaklyHypermeth 1.1263e-03 1.0000e+00 weaklyHypermeth 2.3116e-02 4.5271e-01 weaklyHypermeth 6.5082e-01 1.0000e+00 insignificant 0.03856054 0.15163142 insignificant 1.00000 insignificant 0.6225659 0.7611838 -0.15669991 7 0.5921314 0.7304581 -0.13832666 9.9971e-01 1.0867e-04 weaklyHypometh 1.0000e+00 1.1203e-03 weaklyHypometh 9.9934e-01 4.8262e-03 weaklyHypometh 1.0000000 4.9755e-02 weaklyHypometh -0.1284272 3.3643e-03 weaklyHypometh 0.07009053 weaklyHypometh chr19 60577950 60578950 53667 IL11 ENSG00000095752 0.5632716 45 2 0.6927609 44 4 0.3699443 44 5 0.7897436 29 3 0.5125000 61 4 0.7126587 56 4 0.7036480 106 5 0.5978695 66 3 0.6626707 98 5 0.6808036 64 4 0.7783299 64 4 0.6805556 56 5 0.5000000 52 3 0.5185185 25 2 0.5281481 42 2 0.5678571 68 5 0.3909091 44 3 0.59558316 41 3 0.3446491 40 4 0.4175758 41 4 0.7833333 19 1 0.3555556 27 4 0.4488636 33 3 0.6412338 33 3 0.6210317 58 4 0.4694211 56 4 0.5994048 49 5 0.7928571 21 1 0.7993197 31 3 0.44920635 58 5 0.4394205 67 5 0.4759463 51 5 0.1879121 38 3 0.2136752 36 3 0.0370370 70 5 0.2766667 42 2 0.523148 41 4 0.32604895 67 5 0.4719029 51 3 0.5763889 34 2 0.6045752 31 2 0.4705882 41 1 0.7983025 48 4 0.6801075 0.6383187 0.3900293 0.8387097 0.5053763 0.6847158 0.6283706 0.59345594 0.6370382 0.62644009 0.7748013 0.6326165 0.60438809 0.4142330 0.4884980 0.68548387 0.4636256 0.5307220 0.49405772 0.4154448 0.7150538 0.47526882 0.6094467 0.59457478 0.6897081 0.6442125 0.5218894 0.5580645 0.6205837 0.45975422 0.48302207 0.6967742 0.2224389 0.2067825 0.0716846 4.0015e-01 0.5824373 0.4672908 0.6738351 0.6424731 0.6774194 0.6137097 0.8486559 0 0.5930018 0.5725646 1.6173e-02 4 0.6025862 0.5966326 0.00595362 8.9786e-02 5.4423e-01 lowCoverage 1.00000000 1.0000e+00 lowCoverage 5.7514e-01 6.4724e-01 lowCoverage 1.0000000 1.000000 lowCoverage 0.00743371 0.891758 lowCoverage 1 lowCoverage 0.5927978 0.2517007 0.36515994 6 0.5919062 0.2236843 0.3682219 6.4620e-14 1.0000e+00 hypermethylated 1.2192e-12 1.0000e+00 hypermethylated 6.5124e-07 1.0000e+00 hypermethylated 1.2287e-05 1.0000e+00 hypermethylated 3.1965e-01 2.9511e-03 lowCoverage 4.4047e-02 lowCoverage 0.5927978 0.5170732 0.01448632 2 0.5919062 0.5851686 0.0067376 3.2695e-01 3.7785e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 3.5952e-01 3.3932e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -3.9517e-03 9.5478e-01 lowCoverage 1.0000000 lowCoverage 0.5694165 0.2517007 0.32693307 4 0.5571825 0.2236843 0.3334982 1.1448e-07 1.0000e+00 lowCoverage 1.3312e-06 1.0000e+00 lowCoverage 3.6582e-05 1.0000e+00 lowCoverage 5.6281e-04 1.0000e+00 lowCoverage 0.3122181 3.0711e-03 lowCoverage 4.5837e-02 lowCoverage 0.5694165 0.5170732 -3.5581e-02 1 0.5571825 0.5851686 -0.02798608 7.3636e-01 2.4055e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.5754e-01 2.9687e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.01138538 0.88270218 lowCoverage 1.00000 lowCoverage 0.2517007 0.5170732 -0.38148188 2 0.2236843 0.5851686 -0.36148429 1.0000e+00 5.9981e-06 lowCoverage 1.0000e+00 8.3307e-05 lowCoverage 1.0000e+00 1.4418e-04 lowCoverage 1.0000000 2.7727e-03 lowCoverage -0.3236035 5.5053e-03 lowCoverage 0.10009652 lowCoverage chr19 60670350 60671350 53668 ISOC2 ENSG00000063241 0.3600921 253 17 0.2576182 286 15 0.3219726 199 16 0.3739049 205 13 0.3600490 134 12 0.4121605 445 19 0.3511390 138 11 0.3531011 259 17 0.3395974 196 13 0.4470895 135 13 0.3955907 453 15 0.2573529 100 7 0.3170934 330 17 0.5002387 142 10 0.2720516 179 14 0.1829471 121 14 0.1746032 235 11 0.36085669 200 13 0.3116557 285 17 0.3342456 331 17 0.3726929 128 6 0.2636459 187 16 0.3299720 142 13 0.3222689 113 14 0.3424370 103 10 0.3572240 515 17 0.3308652 209 13 0.2746212 73 6 0.3218103 232 17 0.31388954 529 17 0.2758581 470 17 0.3284067 495 17 0.1745021 283 16 0.1521997 125 14 0.1717443 429 13 0.2798574 71 6 0.153071 303 11 0.26605804 409 17 0.2134392 244 13 0.3384428 262 13 0.4363934 181 13 0.2148225 228 13 0.3569968 215 13 0.4220205 0.2850080 0.3586022 0.4305853 0.3674944 0.4736041 0.3490151 0.37823810 0.3719720 0.51377728 0.4616960 0.3140432 0.33893018 0.3371941 0.3060398 0.25727959 0.2453577 0.3451138 0.33499602 0.3792815 0.4542371 0.28465959 0.3421664 0.33550852 0.3925632 0.3926439 0.3331840 0.3449155 0.3766465 0.31091486 0.32108929 0.4011011 0.2143769 0.1520516 0.1884893 1.5853e-01 0.1647151 0.2426088 0.3179478 0.3742207 0.4328316 0.3131060 0.3495192 5 0.3996974 0.3760951 2.8706e-03 17 0.3550594 0.3173230 0.03773637 3.7666e-01 9.2630e-01 insignificant 1.00000000 1.0000e+00 insignificant 6.5670e-01 9.0973e-01 insignificant 1.0000000 1.000000 insignificant 0.01469369 0.472230 insignificant 1 insignificant 0.3990876 0.1604938 0.24512150 17 0.3331056 0.1741246 0.1589810 1.1063e-16 9.9637e-01 hypermethylated 2.5785e-15 1.0000e+00 hypermethylated 4.0958e-05 9.9815e-01 hypermethylated 5.0565e-04 1.0000e+00 hypermethylated 1.3460e-01 7.5862e-04 weaklyHypermeth 1.4314e-02 weaklyHypermeth 0.3996974 0.2920354 0.01859588 13 0.3550594 0.3485255 0.0065339 5.2514e-01 2.0321e-02 inconclusive 1.0000e+00 3.8751e-01 insignificant 8.3663e-01 3.1639e-02 inconclusive 1.0000e+00 6.0882e-01 insignificant 2.2149e-02 6.5385e-01 insignificant 1.0000000 insignificant 0.3762531 0.1604938 0.25190881 17 0.3252434 0.1741246 0.1511188 3.4949e-18 9.9991e-01 hypermethylated 1.1274e-16 1.0000e+00 hypermethylated 5.0603e-05 9.9998e-01 hypermethylated 7.3337e-04 1.0000e+00 hypermethylated 0.1199023 2.4423e-03 weaklyHypermeth 3.8766e-02 weaklyHypermeth 0.3760951 0.2920354 1.0698e-02 13 0.3173230 0.3485255 -0.03120245 8.5690e-01 6.9028e-03 inconclusive 1.0000e+00 1.9722e-01 insignificant 9.7185e-01 8.3254e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00745540 0.87372973 insignificant 1.00000 insignificant 0.1604938 0.2919255 -0.15499498 13 0.1741246 0.3601167 -0.18599210 9.9977e-01 1.7147e-10 weaklyHypometh 1.0000e+00 4.7632e-09 weaklyHypometh 9.9997e-01 8.6982e-04 weaklyHypometh 1.0000000 1.2251e-02 weaklyHypometh -0.1124469 6.0457e-02 insignificant 0.45116994 insignificant chr19 60705650 60706650 53669 ENSG00000179954 0.7029757 209 5 0.6108772 135 5 0.5606699 111 5 0.6361345 157 5 0.6978535 66 5 0.6903896 295 5 0.7247206 91 5 0.7064572 150 5 0.7070182 94 4 0.6821386 81 5 0.7122264 190 5 0.4952781 57 4 0.7352900 139 5 0.6111111 18 3 0.6119397 118 5 0.6895604 48 4 0.6250000 47 3 0.65603694 138 5 0.5699675 165 5 0.6828033 229 5 0.7250000 34 3 0.5686717 61 5 0.6769740 156 5 0.8598039 63 4 0.7710623 48 4 0.6872677 181 5 0.6633127 81 4 0.5764706 49 4 0.6614706 121 5 0.83979080 160 5 0.7778222 184 5 0.5961401 336 5 0.4270851 169 5 0.5701069 94 5 0.6690303 131 5 0.3380952 28 2 0.544524 84 5 0.50331381 156 5 0.7051667 196 5 0.6027534 202 5 0.7316199 127 5 0.6801863 195 5 0.7794871 166 5 0.8137346 0.7692932 0.6263131 0.7430536 0.8667648 0.8107226 0.8007651 0.81419858 0.7087835 0.77738389 0.7600872 0.7927523 0.87082251 0.6886762 0.8778773 0.76769231 0.8476827 0.7655786 0.82531354 0.7904583 0.8842857 0.81993985 0.7862170 0.80247559 0.8491512 0.7859245 0.7983414 0.6897199 0.7727199 0.87487814 0.82751677 0.8215213 0.6896242 0.6622113 0.7362926 5.3537e-01 0.6927551 0.7150865 0.8162429 0.8364430 0.8549471 0.7862113 0.8613428 3 0.6843972 0.7381275 -2.2110e-02 5 0.6405440 0.6823181 -0.04177414 9.8541e-01 1.2061e-01 insignificant 1.00000000 1.0000e+00 insignificant 9.6216e-01 5.0011e-01 insignificant 1.0000000 1.000000 insignificant -0.04489312 0.171360 lowCoverage 1 lowCoverage 0.6843972 0.6299094 0.08994911 5 0.6405440 0.4951153 0.1454286 1.9628e-05 9.8877e-01 weaklyHypermeth 1.6920e-04 1.0000e+00 weaklyHypermeth 2.7603e-04 9.9994e-01 weaklyHypermeth 3.0333e-03 1.0000e+00 weaklyHypermeth 1.4673e-01 2.4868e-02 lowCoverage 2.3026e-01 lowCoverage 0.6848773 0.7167043 -0.04334477 5 0.6503549 0.6035680 0.0467869 9.0108e-01 3.0688e-02 weaklyHypometh 1.0000e+00 4.7212e-01 insignificant 9.3176e-01 6.3667e-02 insignificant 1.0000e+00 8.0717e-01 insignificant -4.4420e-02 2.2147e-01 lowCoverage 1.0000000 lowCoverage 0.7381275 0.6299094 0.11184063 5 0.6823181 0.4951153 0.1872028 2.1167e-08 9.9979e-01 weaklyHypermeth 2.7137e-07 1.0000e+00 weaklyHypermeth 1.4415e-05 9.9993e-01 weaklyHypermeth 2.4854e-04 1.0000e+00 weaklyHypermeth 0.1916230 7.1611e-03 lowCoverage 8.9514e-02 lowCoverage 0.7384196 0.7167043 -1.8434e-02 5 0.6875353 0.6035680 0.08396722 8.1855e-01 2.3868e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.1070e-01 1.7082e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00047288 0.99090123 lowCoverage 1.00000 lowCoverage 0.6312595 0.7167043 -0.12872439 5 0.4934871 0.6035680 -0.11008094 1.0000e+00 2.0540e-06 weaklyHypometh 1.0000e+00 3.2094e-05 weaklyHypometh 1.0000e+00 1.9883e-05 weaklyHypometh 1.0000000 5.0982e-04 weaklyHypometh -0.1911502 8.5837e-03 lowCoverage 0.13804252 lowCoverage chr19 60720050 60721050 53670 ENSG00000179954 0.2160582 1873 44 0.1734259 1356 44 0.1763794 1483 44 0.2077410 1668 44 0.2171508 680 41 0.2403420 2202 44 0.1993524 1458 44 0.1921489 1206 44 0.1887737 1582 44 0.2390321 1348 44 0.2065734 1202 44 0.1729193 1124 44 0.1781995 1496 44 0.6283650 134 7 0.2100334 1539 44 0.1653846 942 44 0.1517900 1883 44 0.19620663 2115 44 0.1308699 1015 44 0.1922851 2019 44 0.2220406 455 38 0.1365481 1428 44 0.2242982 1473 44 0.1730282 781 44 0.2199041 988 44 0.1954668 1652 44 0.1896903 980 44 0.2123804 529 40 0.2054417 1084 38 0.21747275 1899 44 0.1916205 1829 44 0.2148888 2483 44 0.0779347 1318 41 0.0776358 1165 44 0.2255225 1435 20 0.0824980 715 44 0.115817 626 41 0.13714723 1729 44 0.1979939 2407 44 0.1817997 2155 44 0.1597944 1789 44 0.1643577 2048 44 0.1932107 2350 44 0.2487569 0.1954884 0.1976155 0.2420867 0.2464745 0.2745869 0.2342553 0.23615447 0.2244220 0.26357244 0.2556037 0.2078173 0.20391174 NA 0.2448144 0.17304084 0.1787282 0.2265166 0.14370761 0.2005926 0.2504754 0.14139148 0.2475922 0.21866837 0.2458203 0.2278108 0.2280738 0.2494277 0.2407516 0.25801100 0.22680158 0.2488493 0.0701097 0.0707201 0.1582887 8.0373e-02 0.1216761 0.1468779 0.2243630 0.2038043 0.1780933 0.1845308 0.2207955 39 0.2230538 0.2157756 -6.6507e-03 44 0.1887672 0.2024836 -0.01371634 6.5735e-01 1.1754e-01 insignificant 1.00000000 1.0000e+00 insignificant 4.3918e-01 6.8257e-02 insignificant 1.0000000 1.000000 insignificant 0.01391985 0.564132 insignificant 1 insignificant 0.2230696 0.1368060 0.13384892 44 0.1971569 0.1134637 0.0836932 1.7454e-38 1.0000e+00 weaklyHypermeth 1.1636e-36 1.0000e+00 weaklyHypermeth 1.2220e-20 1.0000e+00 weaklyHypermeth 1.5275e-18 1.0000e+00 weaklyHypermeth 9.4726e-02 1.0623e-02 weaklyHypermeth 1.2071e-01 insignificant 0.2230617 0.2109964 0.01841085 44 0.1928709 0.1747677 0.0181031 3.6303e-04 5.8700e-01 weaklyHypermeth 1.2518e-02 1.0000e+00 weaklyHypermeth 1.7729e-03 8.6884e-01 weaklyHypermeth 7.7082e-02 1.0000e+00 weaklyHypermeth 3.4720e-02 1.5963e-01 insignificant 1.0000000 insignificant 0.2156296 0.1368060 0.13210306 44 0.1966680 0.1134637 0.0832043 3.1656e-27 1.0000e+00 weaklyHypermeth 1.7587e-25 1.0000e+00 weaklyHypermeth 3.4159e-14 1.0000e+00 weaklyHypermeth 2.8466e-12 1.0000e+00 weaklyHypermeth 0.0808058 1.6460e-02 weaklyHypermeth 1.7285e-01 insignificant 0.2156019 0.2109964 2.6786e-02 44 0.1923926 0.1747677 0.01762490 4.0337e-03 9.9467e-01 weaklyHypermeth 1.1525e-01 1.0000e+00 insignificant 1.2007e-02 9.9930e-01 weaklyHypermeth 4.4472e-01 1.0000e+00 insignificant 0.02080044 0.07387984 insignificant 1.00000 insignificant 0.1368060 0.2110160 -0.12510229 44 0.1134637 0.1786515 -0.06518777 1.0000e+00 1.9259e-11 weaklyHypometh 1.0000e+00 6.4198e-10 weaklyHypometh 1.0000e+00 1.7763e-06 weaklyHypometh 1.0000000 6.5788e-05 weaklyHypometh -0.0600053 5.0306e-02 insignificant 0.40569226 insignificant chr19 60752450 60753450 53674 SBK2 ENSG00000187550 0.0368408 430 12 0.0225525 511 12 0.0584111 584 12 0.0491162 393 10 0.0288306 420 12 0.0833575 455 12 0.0456660 571 12 0.0227406 498 12 0.0321066 800 12 0.0460062 739 12 0.0616001 391 12 0.0480038 736 12 0.0155954 691 12 0.0208067 383 7 0.0185344 829 12 0.0624124 729 12 0.0470622 352 12 0.09593652 400 7 0.0149474 347 12 0.0219251 374 12 0.0295527 157 13 0.0522773 329 7 0.0386607 363 12 0.0286766 340 12 0.0441176 225 7 0.0192914 562 12 0.0302350 314 12 0.1064652 271 12 0.0279531 382 12 0.00625101 648 12 0.0269016 524 12 0.0638557 524 12 0.0380195 415 12 0.0535125 303 12 0.0909091 230 8 0.0272727 58 4 0.025167 260 12 0.00927001 410 12 0.0345554 354 12 0.0620009 330 12 0.0060606 250 7 0.0210979 275 11 0.0950209 339 11 0.0277310 0.0255525 0.0363084 0.0232292 0.0167454 0.0438854 0.0350912 0.02649441 0.0357293 0.03339801 0.0286452 0.0544385 0.01120791 0.0242835 0.0141193 0.04035227 0.0459705 0.0425352 0.01117793 0.0231073 0.0108942 0.02374107 0.0385342 0.01504806 0.0112595 0.0141638 0.0132345 0.0200346 0.0295608 0.00448584 0.02103823 0.0406654 0.0138621 0.0845352 0.0109996 3.7253e-02 0.0347646 0.0094451 0.0224906 0.0313676 0.0093193 0.0334784 0.0934294 7 0.0401580 0.0280233 1.1433e-02 12 0.0323775 0.0384650 -0.00608751 2.4493e-02 9.8903e-01 weaklyHypermeth 1.00000000 1.0000e+00 insignificant 2.8517e-02 9.8374e-01 weaklyHypermeth 1.0000000 1.000000 insignificant 0.00210278 0.817966 insignificant 1 insignificant 0.0401580 0.0304296 0.00966442 12 0.0323775 0.0896689 -0.0572914 5.1365e-02 9.7327e-01 insignificant 2.4814e-01 1.0000e+00 insignificant 2.9018e-03 9.9990e-01 weaklyHypermeth 2.5909e-02 1.0000e+00 weaklyHypermeth 9.3081e-04 9.4380e-01 insignificant 1.0000e+00 insignificant 0.0401580 0.0465116 -0.01355366 11 0.0323775 0.0462187 -0.0138412 9.5125e-01 2.5325e-02 weaklyHypometh 1.0000e+00 4.4619e-01 insignificant 4.1753e-01 9.5660e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -2.1245e-03 9.0312e-01 insignificant 1.0000000 insignificant 0.0280233 0.0304296 -0.00225716 12 0.0384650 0.0896689 -0.0512038 3.4775e-01 8.8140e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.0353e-01 9.5491e-01 insignificant 5.6268e-01 1.0000e+00 insignificant -0.0011720 9.3450e-01 insignificant 1.0000e+00 insignificant 0.0280233 0.0465116 -2.4279e-02 11 0.0384650 0.0462187 -0.00775371 9.9433e-01 6.1861e-03 weaklyHypometh 1.0000e+00 1.8746e-01 insignificant 9.2653e-01 8.3667e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00422731 0.81689962 insignificant 1.00000 insignificant 0.0304296 0.0465116 -0.01962976 11 0.0896689 0.0462187 0.04345014 9.9502e-01 1.3705e-01 insignificant 1.0000e+00 6.3451e-01 insignificant 9.9845e-01 4.7981e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.0030553 8.8036e-01 insignificant 1.00000000 insignificant chr19 60754550 60755550 53675 SBK2 ENSG00000187550 0.7682203 141 6 0.7297772 135 6 0.5599206 54 6 0.7958320 160 6 0.7287037 51 6 0.6536915 137 6 0.7559524 63 6 0.7241989 96 6 0.7698365 77 6 0.8199248 76 6 0.6488879 191 6 0.6972789 29 2 0.6883344 149 6 0.7380952 47 6 0.8196487 67 6 0.3888889 19 2 0.6571429 33 2 0.82220442 149 6 0.6241406 77 6 0.6969120 153 6 0.8492063 21 2 0.8434829 63 6 0.6178571 35 3 0.6759259 30 2 0.6530501 67 6 0.8014202 147 6 0.8517857 61 5 0.6309524 27 2 0.8377930 120 6 0.74450967 116 6 0.5878814 137 6 0.6701630 209 6 0.7078673 90 6 0.7884060 76 6 0.6611722 85 6 0.5654762 26 2 0.592942 58 6 0.77370718 129 6 0.7537856 107 6 0.7916667 93 6 0.7228261 174 6 0.6572975 77 6 0.8462033 136 6 0.7830264 0.7385397 0.6686942 0.8258102 0.7986618 0.8174306 0.7571776 0.69142043 0.7890301 0.81815854 0.7751049 0.7205422 0.82382470 0.7854536 0.8160155 0.56569343 0.6474453 0.8239373 0.79105351 0.8176982 0.8109141 0.83717013 0.7916058 0.76642336 0.6904251 0.8176107 0.8606621 0.7463504 0.8316868 0.81221791 0.71477152 0.8253834 0.7397914 0.7609082 0.7540440 6.5572e-01 0.7626868 0.8044367 0.7926304 0.8211679 0.8555617 0.8107799 0.8404024 2 0.7715336 0.7783156 -8.0332e-03 6 0.7122653 0.6976996 0.01456575 5.7839e-01 2.9268e-01 insignificant 1.00000000 1.0000e+00 insignificant 9.2700e-01 9.4049e-02 insignificant 1.0000000 1.000000 insignificant -0.02595606 0.492093 lowCoverage 1 lowCoverage 0.7715336 0.7607759 0.01161047 6 0.7122653 0.6483259 0.0639394 1.8470e-01 8.0236e-01 insignificant 7.9958e-01 1.0000e+00 insignificant 3.1846e-01 6.3038e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.2784e-02 6.1664e-01 insignificant 1.0000e+00 insignificant 0.7715336 0.8245315 -0.04651836 6 0.7122653 0.7378610 -0.0255957 9.4569e-01 2.6325e-02 weaklyHypometh 1.0000e+00 4.4619e-01 insignificant 9.8760e-01 2.9465e-02 weaklyHypometh 1.0000e+00 5.9601e-01 insignificant -4.9976e-02 2.3481e-01 insignificant 1.0000000 insignificant 0.7783156 0.7607759 0.01893139 6 0.6976996 0.6483259 0.0493737 1.8584e-01 8.8567e-01 insignificant 7.8082e-01 1.0000e+00 insignificant 1.5801e-01 9.5332e-01 insignificant 7.8667e-01 1.0000e+00 insignificant 0.0487405 3.2850e-01 lowCoverage 1.0000e+00 lowCoverage 0.7783156 0.8245315 -3.8559e-02 6 0.6976996 0.7378610 -0.04016144 9.9331e-01 5.1626e-02 insignificant 1.0000e+00 7.5921e-01 insignificant 9.3866e-01 4.2418e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02402019 0.59030232 lowCoverage 1.00000 lowCoverage 0.7607759 0.8245315 -0.05752872 6 0.6483259 0.7378610 -0.08953510 9.8596e-01 6.0276e-02 insignificant 1.0000e+00 3.0753e-01 insignificant 9.8898e-01 1.9095e-01 insignificant 1.0000000 9.4527e-01 insignificant -0.0727607 1.7363e-01 insignificant 0.90412395 insignificant chr19 60767050 60768050 53676 SBK2 ENSG00000187550 0.8102448 410 17 0.7334273 568 18 0.6304866 362 16 0.7362557 467 16 0.7067323 243 12 0.7345249 945 18 0.7659285 270 15 0.7486837 433 16 0.7252846 247 16 0.7866206 334 15 0.8165615 652 17 0.7518229 126 10 0.8058504 422 15 0.7954991 261 16 0.7696254 404 15 0.6137311 148 10 0.4214286 21 1 0.69293414 558 17 0.8168166 688 16 0.6940894 659 17 0.7920928 166 11 0.8600817 105 7 0.7762874 417 16 0.8366887 201 12 0.9181818 119 8 0.8321039 533 17 0.7619693 355 16 0.6562165 148 9 0.7556247 649 16 0.75688166 705 17 0.6950250 771 17 0.8180757 805 17 0.4169972 520 17 0.4539411 544 16 0.4576409 639 13 0.4675926 63 3 0.434346 413 17 0.54435960 692 17 0.8305376 492 17 0.8075305 604 17 0.7463362 337 15 0.7518051 588 15 0.7445752 327 17 0.8120024 0.7187309 0.6936683 0.8748376 0.7415825 0.8181685 0.7946100 0.77724827 0.7502489 0.84440913 0.8262503 0.7856671 0.81644136 0.8078120 0.8235313 0.68044797 0.7105416 0.7769183 0.81966572 0.7928620 0.8138671 0.90027107 0.8246744 0.82914279 0.8852302 0.8425604 0.7652824 0.7443130 0.7661470 0.83729959 0.78264466 0.8550982 0.3765891 0.5000261 0.4563547 5.3979e-01 0.4579138 0.6345021 0.7939938 0.7841620 0.7617567 0.8043276 0.7301561 7 0.7972743 0.8268999 -1.1442e-02 16 0.7296534 0.7311062 -0.00145282 9.6916e-01 4.7383e-02 weaklyHypometh 1.00000000 1.0000e+00 insignificant 9.9872e-01 1.6850e-02 weaklyHypometh 1.0000000 0.978635 insignificant -0.06044166 0.047259 weaklyHypometh 1 insignificant 0.7972743 0.5387029 0.29315351 16 0.7296534 0.4729239 0.2567295 6.8573e-55 1.0000e+00 hypermethylated 1.3715e-52 1.0000e+00 hypermethylated 3.0350e-17 1.0000e+00 hypermethylated 1.8969e-15 1.0000e+00 hypermethylated 2.6535e-01 1.1441e-08 hypermethylated 7.6271e-07 hypermethylated 0.7986831 0.7614991 0.02750240 16 0.7766345 0.7627806 0.0138538 1.6012e-03 6.4318e-02 weaklyHypermeth 4.8522e-02 7.1133e-01 weaklyHypermeth 2.0840e-03 8.6910e-02 weaklyHypermeth 8.0156e-02 9.4842e-01 weaklyHypermeth -4.8329e-02 9.5566e-02 insignificant 0.9461992 insignificant 0.8268999 0.5387029 0.29014377 16 0.7311062 0.4729239 0.2581824 3.1122e-38 1.0000e+00 hypermethylated 3.8902e-36 1.0000e+00 hypermethylated 2.0181e-17 1.0000e+00 hypermethylated 3.3634e-15 1.0000e+00 hypermethylated 0.3257895 4.7612e-09 hypermethylated 7.9353e-07 hypermethylated 0.8276626 0.7614991 2.9333e-02 16 0.7905209 0.7627806 0.02774030 1.9874e-04 2.7149e-01 weaklyHypermeth 8.9596e-03 1.0000e+00 weaklyHypermeth 1.6955e-03 5.1135e-01 weaklyHypermeth 1.1021e-01 1.0000e+00 insignificant 0.01211218 0.66482029 insignificant 1.00000 insignificant 0.5385689 0.7614991 -0.26425882 16 0.4437579 0.7627806 -0.31902267 1.0000e+00 1.7284e-22 hypomethylated 1.0000e+00 1.7284e-20 hypomethylated 1.0000e+00 5.2888e-12 hypomethylated 1.0000000 7.5555e-10 hypomethylated -0.3136773 6.6625e-07 hypomethylated 0.00022208 hypomethylated chr19 61336650 61337650 53679 ZNF787 ENSG00000142409 0.8502528 631 17 0.7537809 748 17 0.7778250 416 17 0.8595498 434 17 0.8658488 248 15 0.8222810 779 17 0.7456233 320 14 0.7311062 381 17 0.7619345 255 14 0.7368481 389 17 0.7977684 780 17 0.6924301 188 12 0.8068904 461 17 0.8479205 167 12 0.8055094 429 17 0.8354038 159 11 0.6646889 1198 9 0.85502707 586 17 0.8199043 600 17 0.8115755 675 17 0.8198287 154 14 0.7499624 206 17 0.7404758 404 17 0.6843579 185 14 0.8184958 183 16 0.8270138 598 17 0.6554440 362 15 0.7685566 155 10 0.7996827 598 17 0.80477368 868 18 0.8098427 692 18 0.7695281 856 17 0.6565392 469 18 0.6972991 441 18 0.7921030 764 16 0.5744468 100 7 0.772557 216 13 0.68757285 680 17 0.7985192 547 17 0.7233635 609 17 0.8169379 445 17 0.8647442 496 17 0.8303132 543 17 0.8881130 0.7920874 0.8347703 0.8967118 0.8851131 0.8588719 0.8165890 0.77623274 0.8135051 0.79530681 0.8224671 0.7824137 0.80155414 0.8582777 0.8532989 0.87070278 0.8238968 0.8769037 0.86689953 0.8092387 0.8150557 0.83933753 0.8295577 0.79594818 0.8605200 0.8361941 0.8008320 0.8232358 0.8443191 0.83924587 0.85336018 0.8629042 0.6713390 0.7598324 0.8205002 5.9699e-01 0.7869299 0.6861262 0.8962816 0.8789752 0.8861173 0.9149166 0.8665398 10 0.8439659 0.8351711 9.0648e-03 17 0.8102266 0.7640918 0.04613485 7.5747e-02 6.0958e-01 insignificant 1.00000000 1.0000e+00 insignificant 3.6088e-02 6.7975e-01 weaklyHypermeth 1.0000000 1.000000 insignificant 0.02144492 0.304760 insignificant 1 insignificant 0.8439659 0.7378277 0.09897507 17 0.8102266 0.7094453 0.1007814 2.0623e-11 9.9976e-01 weaklyHypermeth 3.0681e-10 1.0000e+00 weaklyHypermeth 2.8769e-05 9.9908e-01 weaklyHypermeth 3.6417e-04 1.0000e+00 weaklyHypermeth 9.5355e-02 3.0593e-02 weaklyHypermeth 2.6373e-01 insignificant 0.8439659 0.8712121 -0.04125598 17 0.8102266 0.7903139 0.0199128 9.7391e-01 6.5488e-04 weaklyHypometh 1.0000e+00 3.6382e-02 weaklyHypometh 7.5956e-01 1.1129e-04 weaklyHypometh 1.0000e+00 1.4678e-02 weaklyHypometh -1.4667e-02 6.0175e-01 insignificant 1.0000000 insignificant 0.8351711 0.7378277 0.09063255 17 0.7640918 0.7094453 0.0546465 1.4525e-08 9.9338e-01 weaklyHypermeth 1.9628e-07 1.0000e+00 weaklyHypermeth 1.1020e-03 9.7784e-01 weaklyHypermeth 1.1132e-02 1.0000e+00 weaklyHypermeth 0.0739105 7.7152e-02 insignificant 4.9066e-01 insignificant 0.8351711 0.8712121 -4.5087e-02 17 0.7640918 0.7903139 -0.02622208 9.1020e-01 1.8278e-06 weaklyHypometh 1.0000e+00 2.6112e-04 weaklyHypometh 9.8684e-01 3.9271e-04 weaklyHypometh 1.0000e+00 3.9271e-02 weaklyHypometh -0.03611208 0.23945181 insignificant 1.00000 insignificant 0.7378277 0.8712121 -0.13515387 17 0.7094453 0.7903139 -0.08086860 9.9988e-01 9.1347e-10 weaklyHypometh 1.0000e+00 2.2280e-08 weaklyHypometh 9.9999e-01 4.2871e-07 weaklyHypometh 1.0000000 2.3817e-05 weaklyHypometh -0.1100226 2.3347e-02 weaklyHypometh 0.23582820 insignificant chr20 2748850 2749850 53736 ENSG00000198326 0.3764992 530 20 0.2170973 595 25 0.3808999 733 24 0.0660398 386 18 0.4182289 486 18 0.1133797 820 23 0.2832488 615 24 0.1421680 727 24 0.1398432 661 25 0.2137710 801 24 0.2051261 784 24 0.1100658 818 25 0.5924817 499 25 0.1153074 334 8 0.1756441 738 24 0.0991881 728 24 0.2359591 254 16 0.30125965 462 17 0.6469197 564 24 0.1213799 526 23 0.2108279 321 24 0.1172048 411 16 0.0693011 481 24 0.1514336 424 20 0.3093531 249 16 0.2954634 633 24 0.4088038 606 24 0.1600911 221 14 0.2892535 394 24 0.07737183 837 24 0.6224560 469 24 0.1953374 639 22 0.1323260 501 24 0.1316538 447 24 0.2236625 454 17 0.0724206 162 13 0.147472 357 15 0.11882320 569 24 0.2622465 603 22 0.2451043 583 20 0.2559715 391 16 0.1632760 408 20 0.4513293 530 17 0.4505843 0.2111373 0.4994093 0.0318083 0.4666678 0.0866370 0.3371362 0.14877959 0.1879591 0.20781910 0.2165013 0.1156417 0.70334743 0.1542909 0.1959472 0.14560652 0.4063833 0.3432132 0.71175927 0.1494265 0.2246695 0.15387237 0.1191057 0.19761073 0.3434429 0.2899629 0.4691249 0.1842948 0.3214350 0.07998658 0.65810540 0.2016347 0.1228125 0.0642807 0.0970821 3.7357e-02 0.1088486 0.0754021 0.3030449 0.2913006 0.3881500 0.2111691 0.4262933 12 0.2648205 0.2548813 9.2795e-04 24 0.2454185 0.2397986 0.00561986 9.2926e-01 6.4647e-01 insignificant 1.00000000 1.0000e+00 insignificant 8.8721e-01 7.3246e-01 insignificant 1.0000000 1.000000 insignificant 0.00548391 0.925755 insignificant 1 insignificant 0.2648864 0.1036145 0.16070928 24 0.2545081 0.1623619 0.0921461 3.7208e-11 5.4199e-01 weaklyHypermeth 5.0970e-10 1.0000e+00 weaklyHypermeth 2.3027e-14 9.9953e-01 weaklyHypermeth 1.1513e-12 1.0000e+00 weaklyHypermeth 1.1000e-01 1.4223e-02 weaklyHypermeth 1.5294e-01 insignificant 0.2649111 0.2660040 -0.05335475 20 0.2411432 0.2833108 -0.0421676 9.6977e-01 3.0172e-02 weaklyHypometh 1.0000e+00 4.7212e-01 insignificant 9.0517e-01 5.3100e-02 insignificant 1.0000e+00 7.2740e-01 insignificant -2.7860e-02 6.5180e-01 insignificant 1.0000000 insignificant 0.2548847 0.1036145 0.15813550 24 0.2394208 0.1623619 0.0770589 1.1017e-10 9.9236e-01 weaklyHypermeth 1.8994e-09 1.0000e+00 weaklyHypermeth 8.8772e-13 9.9999e-01 weaklyHypermeth 5.5482e-11 1.0000e+00 weaklyHypermeth 0.1045151 5.3444e-02 insignificant 3.6858e-01 insignificant 0.2553379 0.2660040 -5.9285e-02 20 0.2552411 0.2833108 -0.02806966 9.4493e-01 5.6678e-02 insignificant 1.0000e+00 7.9832e-01 insignificant 9.1690e-01 7.9575e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03334406 0.62155436 insignificant 1.00000 insignificant 0.1033789 0.2660040 -0.20606886 20 0.1353509 0.2833108 -0.14795992 9.9781e-01 3.8305e-23 hypomethylated 1.0000e+00 4.7881e-21 hypomethylated 9.9914e-01 1.3933e-11 hypomethylated 1.0000000 1.5481e-09 hypomethylated -0.1378591 4.0546e-02 weaklyHypometh 0.34072250 insignificant chr20 3741050 3742050 53745 CDC25B ENSG00000101224 0.6876623 215 6 0.5713458 222 6 0.4833563 70 6 0.7171958 184 6 0.4969697 51 5 0.5750550 689 6 0.5707792 57 6 0.7711900 172 6 0.5777778 81 6 0.5432099 82 6 0.6441682 273 6 0.6361111 29 3 0.6249474 134 6 0.6561772 53 6 0.6963508 76 6 0.7250000 27 3 0.4285714 7 0 0.57469117 184 6 0.7453722 240 6 0.6231281 349 6 0.6511905 78 5 0.7410283 84 5 0.6539149 151 6 0.6239177 75 5 0.6372054 73 6 0.7349487 197 6 0.7161531 171 6 0.7291667 60 6 0.7082233 176 6 0.57144516 175 6 0.6118860 173 6 0.6726928 480 6 0.5021136 101 6 0.6097884 63 6 0.6829798 176 6 0.9166667 8 0 0.440709 319 6 0.64663809 221 6 0.6016635 212 6 0.7382951 210 6 0.7834409 173 6 0.6836146 67 3 0.6346591 145 6 0.7290795 0.6663656 0.5819511 0.7571303 0.5858373 0.7451889 0.5655639 0.70810015 0.5530702 0.85906433 0.6767869 0.6036842 0.75632225 0.6650840 0.7444616 0.77131579 0.6027502 0.7505893 0.73753205 0.7296905 0.5950877 0.73572246 0.6880543 0.66721805 0.6661350 0.7670561 0.7204094 0.7495614 0.7516131 0.63214122 0.71053986 0.7412201 0.5085257 0.6079282 0.6299963 8.9474e-01 0.5335640 0.6125277 0.6883702 0.7798827 0.8188456 0.6928133 0.7643242 3 0.7082942 0.7047015 3.3365e-03 6 0.5733837 0.6665823 -0.09319861 8.8075e-01 3.5427e-01 insignificant 1.00000000 1.0000e+00 insignificant 9.3877e-01 2.7959e-01 insignificant 1.0000000 1.000000 insignificant -0.05352809 0.047216 weaklyHypometh 1 insignificant 0.7082942 0.5810811 0.13648305 6 0.5733837 0.5744840 -0.0011003 6.2507e-07 9.3191e-01 weaklyHypermeth 5.9530e-06 1.0000e+00 weaklyHypermeth 1.4664e-01 9.3947e-01 insignificant 7.5588e-01 1.0000e+00 insignificant -1.5696e-02 8.3194e-01 insignificant 1.0000e+00 insignificant 0.7091709 0.7472119 -0.03516686 6 0.6059176 0.6331336 -0.0272160 9.3725e-01 5.5759e-02 insignificant 1.0000e+00 6.8048e-01 insignificant 9.9490e-01 1.3251e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -7.0882e-02 1.0913e-01 insignificant 1.0000000 insignificant 0.7047015 0.5810811 0.13130329 6 0.6665823 0.5744840 0.0920983 2.8613e-06 9.9994e-01 weaklyHypermeth 2.8902e-05 1.0000e+00 weaklyHypermeth 4.3088e-02 9.9951e-01 weaklyHypermeth 2.6930e-01 1.0000e+00 insignificant 0.0378318 6.0788e-01 insignificant 1.0000e+00 insignificant 0.7045093 0.7472119 -4.1099e-02 6 0.6398988 0.6331336 0.00676522 8.8348e-01 2.8390e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8374e-01 3.8595e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01735359 0.65355022 insignificant 1.00000 insignificant 0.5807910 0.7472119 -0.17387599 6 0.5393808 0.6331336 -0.09375279 9.9985e-01 7.0751e-06 weaklyHypometh 1.0000e+00 9.6920e-05 weaklyHypometh 9.9992e-01 3.2034e-02 weaklyHypometh 1.0000000 2.2246e-01 insignificant -0.0551854 4.8769e-01 insignificant 1.00000000 insignificant chr20 4994550 4995550 53786 ENSG00000218856 0.9247613 232 6 0.8581261 175 6 0.7496762 152 6 0.8773496 168 3 0.8012271 75 6 0.9203173 266 7 0.8353695 141 7 0.9629630 93 6 0.7584450 100 6 0.6918651 72 6 0.9566496 170 7 0.9375000 47 6 0.8570818 61 6 0.9454545 25 2 0.8222655 103 6 0.9761905 62 6 0.8871111 57 5 0.96815081 272 3 0.9870968 148 3 0.9388511 201 6 0.8621528 43 6 0.8576923 56 6 0.6589947 112 6 0.9273810 90 6 0.9312500 66 3 0.6717532 130 6 0.9179509 103 6 0.7240741 32 3 0.9336379 100 3 0.89146871 197 6 0.8490729 207 7 0.9423106 259 6 0.8623577 123 6 0.9710145 144 3 0.8666667 95 3 0.9386364 39 4 0.742510 166 6 0.71886563 215 6 0.9212359 268 4 0.9552376 185 4 0.9045422 207 3 0.8153561 202 3 0.9484407 190 3 0.8605078 0.7528663 0.9328485 0.8414211 0.8274095 0.8721247 0.9321970 0.93066667 0.8714142 0.88497778 0.9384103 0.9392000 0.89240733 0.9341594 0.8832896 0.99314286 0.8755721 0.9471613 0.98200692 0.9049112 0.7975556 0.86424615 0.9123048 0.96226667 0.9896000 0.8898286 0.9341616 0.8088000 0.8553767 0.93700720 0.91886503 0.9140042 0.8541667 0.9220870 0.9835193 8.8046e-01 0.7101301 0.6863751 0.9298208 0.9252602 0.8740923 0.8827201 0.9079715 3 0.8935115 0.9030869 -8.4008e-03 6 0.8431662 0.7927013 0.05046498 8.7793e-02 7.2545e-01 insignificant 1.00000000 1.0000e+00 insignificant 1.5752e-01 8.5021e-01 insignificant 1.0000000 1.000000 insignificant 0.03551102 0.328456 insignificant 1 insignificant 0.8969231 0.7749361 0.11855448 6 0.9237495 0.7862615 0.1374880 2.0229e-06 9.9995e-01 weaklyHypermeth 1.8558e-05 1.0000e+00 weaklyHypermeth 5.0116e-02 9.8255e-01 insignificant 3.0374e-01 1.0000e+00 insignificant 3.2814e-02 4.9445e-01 lowCoverage 1.0000e+00 lowCoverage 0.8969231 0.8925856 -0.00160663 3 0.9237495 0.9289995 -0.0052501 6.8111e-01 1.4935e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.6928e-01 2.1697e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -2.6140e-02 4.2679e-01 lowCoverage 1.0000000 lowCoverage 0.9061372 0.7749361 0.12038266 6 0.8971266 0.7862615 0.1108651 8.3328e-03 9.9847e-01 weaklyHypermeth 4.8730e-02 1.0000e+00 weaklyHypermeth 4.5135e-01 8.9571e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0026968 9.5900e-01 lowCoverage 1.0000e+00 lowCoverage 0.9061372 0.8925856 2.2525e-02 3 0.8971266 0.9289995 -0.03187295 6.3219e-01 8.4110e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.2951e-01 1.0194e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.06165091 0.13816726 lowCoverage 1.00000 lowCoverage 0.7749361 0.8925856 -0.11701672 3 0.7862615 0.9289995 -0.14273807 9.9874e-01 1.0622e-03 lowCoverage 1.0000e+00 8.8513e-03 lowCoverage 9.8030e-01 5.5197e-02 lowCoverage 1.0000000 3.4715e-01 lowCoverage -0.0589541 2.5902e-01 lowCoverage 1.00000000 lowCoverage chr20 5000850 5001850 53787 ENSG00000218856 0.7960961 197 5 0.8334907 98 5 0.7901401 45 3 0.8075099 162 5 0.6086111 55 5 0.7069917 291 5 0.7650000 41 4 0.7155169 140 5 0.7480620 68 4 0.7614583 72 3 0.6157721 207 5 0.4714286 27 2 0.7998538 93 5 0.8626087 53 5 0.7439394 62 3 0.8133333 28 2 0.3809524 15 2 0.58444441 164 5 0.9127447 138 5 0.7887056 234 7 0.4375000 40 4 0.9880952 38 2 0.6669907 90 5 0.5279974 69 4 0.9843750 26 1 0.8917897 246 5 0.6825397 49 4 0.5530303 32 2 0.5930090 164 5 0.88267298 176 5 0.8673137 186 5 0.8868877 259 5 0.6847301 119 5 0.6460726 72 5 0.8269231 123 3 0.8333333 6 0 0.720589 110 4 0.76797488 164 5 0.7373257 113 5 0.7464691 173 5 0.7075893 100 5 0.7835165 57 5 0.8327964 127 5 0.9283749 0.8508014 0.8969655 0.9407357 0.7803356 0.8888911 0.8972917 0.89472638 0.8730943 0.90819444 0.9256317 0.8953580 0.91647173 0.9079710 0.8432449 0.87480245 0.7707548 0.9013928 0.96309131 0.9363871 0.8332722 0.95608966 0.9042523 0.79098595 0.9488972 0.9487322 0.9587352 0.8594697 0.9294720 0.93426606 0.91395639 0.9251766 0.9032803 0.8351675 0.9391026 8.3408e-01 0.8079594 0.9122841 0.9466467 0.9338784 0.9546131 0.9275641 0.9302942 2 0.8736842 0.8832117 -3.6934e-03 5 0.7314673 0.7168289 0.01463837 6.0251e-01 4.2114e-01 insignificant 1.00000000 1.0000e+00 insignificant 7.6445e-01 3.7289e-01 insignificant 1.0000000 1.000000 insignificant -0.02151712 0.735541 lowCoverage 1 lowCoverage 0.8736842 0.8556876 0.02943298 5 0.7314673 0.6720925 0.0593748 1.4510e-01 7.0556e-01 insignificant 6.4204e-01 1.0000e+00 insignificant 5.8662e-01 3.8036e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -2.1271e-02 6.2729e-01 lowCoverage 1.0000e+00 lowCoverage 0.8726027 0.8859649 -0.03053935 5 0.6946376 0.7252668 -0.0306292 9.8198e-01 1.5490e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9874e-01 6.6407e-02 insignificant 1.0000e+00 8.1206e-01 insignificant -3.6206e-02 3.3451e-01 lowCoverage 1.0000000 lowCoverage 0.8807273 0.8518519 0.03598864 5 0.6594035 0.6418600 0.0175435 3.2071e-01 8.9032e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.1101e-01 5.4301e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0002462 9.9695e-01 lowCoverage 1.0000e+00 lowCoverage 0.8832117 0.8904594 -2.8572e-02 5 0.7168289 0.7846751 -0.06784623 9.8592e-01 1.3931e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8722e-01 1.6869e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01468929 0.80815393 lowCoverage 1.00000 lowCoverage 0.8556876 0.8904594 -0.06000871 5 0.6720925 0.7846751 -0.11258263 9.8113e-01 7.0428e-02 insignificant 1.0000e+00 3.5039e-01 insignificant 9.0524e-01 2.4501e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.0149355 7.0282e-01 lowCoverage 1.00000000 lowCoverage chr20 5777650 5778650 53808 C20orf196 ENSG00000171984 0.8345777 686 21 0.7589000 486 21 0.7687756 288 21 0.8571829 328 21 0.8083669 202 14 0.7867115 851 21 0.8768750 205 12 0.8246948 431 19 0.7514262 170 12 0.8199896 273 18 0.7907430 795 21 0.7692240 131 13 0.8125672 585 20 0.8333333 57 6 0.8198199 261 21 0.7603573 161 11 0.7159403 176 14 0.80589059 365 19 0.8098330 487 18 0.8507697 758 21 0.8072971 246 13 0.8260319 197 20 0.7837806 322 18 0.8325512 251 17 0.8202491 141 16 0.7969655 577 21 0.7670245 394 16 0.8822917 88 10 0.7692864 463 20 0.72465189 708 21 0.8061215 601 21 0.8067124 794 21 0.7931415 473 20 0.7535584 477 21 0.7616537 380 21 0.7562322 125 8 0.727446 322 20 0.79867411 708 21 0.7674034 472 21 0.8090535 573 21 0.8609716 432 21 0.7816833 386 21 0.8547067 425 19 0.8532197 0.7912006 0.8182670 0.8801951 0.8154487 0.8218774 0.8539883 0.84994135 0.7618087 0.85978901 0.8389590 0.7946632 0.84338446 0.8497498 0.8751539 0.73670924 0.7571447 0.8612723 0.85169439 0.8703560 0.8300814 0.86013514 0.8266836 0.83362741 0.8163223 0.8455288 0.8223144 0.8689424 0.8038560 0.83226457 0.84222811 0.8487364 0.8003603 0.7596345 0.7667688 7.7497e-01 0.8020990 0.8342989 0.8326090 0.8653213 0.8972331 0.8221813 0.8879579 6 0.8390073 0.8554091 4.8891e-03 21 0.7976662 0.7844525 0.01321370 5.8994e-02 5.7756e-01 insignificant 1.00000000 1.0000e+00 insignificant 3.1611e-01 8.5284e-01 insignificant 1.0000000 1.000000 insignificant 0.00088528 0.951695 insignificant 1 insignificant 0.8389864 0.8173038 0.03936324 21 0.7884692 0.7810300 0.0074391 1.1355e-04 9.8605e-01 weaklyHypermeth 8.9408e-04 1.0000e+00 weaklyHypermeth 6.6225e-03 9.9770e-01 weaklyHypermeth 5.3407e-02 1.0000e+00 weaklyHypermeth 3.7681e-02 1.9667e-02 weaklyHypermeth 1.8911e-01 insignificant 0.8389864 0.8198513 -0.02025011 21 0.7884692 0.8228328 -0.0343636 7.5911e-01 8.0486e-02 insignificant 1.0000e+00 7.8908e-01 insignificant 8.8515e-01 9.5328e-02 insignificant 1.0000e+00 9.8277e-01 insignificant -1.1965e-02 5.8736e-01 insignificant 1.0000000 insignificant 0.8555276 0.8173038 0.03348728 21 0.7898064 0.7810300 0.0087763 3.8613e-04 9.5774e-01 weaklyHypermeth 3.0166e-03 1.0000e+00 weaklyHypermeth 7.9520e-03 9.9099e-01 weaklyHypermeth 6.4144e-02 1.0000e+00 weaklyHypermeth 0.0367959 3.4411e-02 weaklyHypermeth 2.7208e-01 insignificant 0.8556183 0.8199301 -1.8735e-02 21 0.7989452 0.8305357 -0.03159050 8.1574e-01 4.4871e-02 weaklyHypometh 1.0000e+00 7.0060e-01 insignificant 9.1273e-01 1.9146e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01285004 0.57717076 insignificant 1.00000 insignificant 0.8173038 0.8198513 -0.05858719 21 0.7810300 0.8228328 -0.04180276 9.7875e-01 6.2283e-05 weaklyHypometh 1.0000e+00 7.0776e-04 weaklyHypometh 9.9944e-01 1.4496e-03 weaklyHypometh 1.0000000 1.8349e-02 weaklyHypometh -0.0496460 5.9144e-02 insignificant 0.44576079 insignificant chr20 6429850 6430850 53815 ENSG00000221449 0.7847061 261 8 0.8013393 125 8 0.4428571 50 8 0.8204659 159 8 0.7217758 78 8 0.6991696 182 8 0.6142045 92 8 0.7664973 119 8 0.7869949 65 7 0.8826885 55 8 0.7691729 189 8 0.8348214 40 5 0.8024621 109 8 0.7674062 87 8 0.7443182 48 4 0.6875000 22 2 0.8880000 53 2 0.86646706 318 7 0.7341503 74 6 0.7747809 203 6 0.8605442 26 1 0.9000000 10 0 0.8337387 119 5 0.5731293 31 3 0.8635006 147 6 0.8645833 128 6 0.7639170 76 6 0.6696429 36 3 0.8116207 144 8 0.82014652 112 6 0.8680556 91 6 0.9087824 137 8 0.7181965 114 8 0.6798271 70 6 0.6906974 159 6 0.3333333 8 0 0.710625 152 6 0.69245507 157 6 0.7881402 254 8 0.8249893 139 8 0.8479642 254 8 0.7412137 138 5 0.7991059 150 8 0.7984351 0.8222697 0.5445135 0.8583762 0.7015442 0.7648867 0.6286932 0.78456766 0.8389328 0.89876639 0.7847373 0.8625776 0.83283926 0.7913608 0.7855731 0.75724638 0.8978875 0.8836036 0.79515665 0.8399673 0.8298999 0.89242325 0.8394221 0.62646817 0.8412220 0.8826346 0.7794549 0.7072981 0.8286133 0.85292244 0.85900190 0.9183838 0.7725355 0.6716496 0.7331987 3.2087e-01 0.7097100 0.7101354 0.8206985 0.8558465 0.8741811 0.8618875 0.8184971 0 0.8232258 0.8647114 -1.7148e-02 6 0.7787782 0.8240652 -0.04528700 9.4205e-01 5.2177e-03 weaklyHypometh 1.00000000 5.2177e-01 insignificant 8.0702e-01 9.8546e-03 weaklyHypometh 1.0000000 0.821220 insignificant -0.05198284 0.165798 lowCoverage 1 lowCoverage 0.8226707 0.7127660 0.13699920 7 0.7478029 0.7108099 0.0369929 2.1168e-05 9.7143e-01 weaklyHypermeth 1.8092e-04 1.0000e+00 weaklyHypermeth 1.5663e-02 9.6664e-01 weaklyHypermeth 1.1188e-01 1.0000e+00 insignificant 1.2197e-01 1.0697e-01 insignificant 6.8134e-01 insignificant 0.8226707 0.9122995 -0.04507478 8 0.7478029 0.7306627 0.0171402 9.3840e-01 9.5990e-02 insignificant 1.0000e+00 8.4947e-01 insignificant 9.4167e-01 1.0074e-01 insignificant 1.0000e+00 9.9997e-01 insignificant -4.0794e-02 1.7397e-01 insignificant 1.0000000 insignificant 0.8647114 0.7118902 0.15259034 6 0.8240652 0.6746612 0.1494041 4.5290e-07 1.0000e+00 weaklyHypermeth 4.9770e-06 1.0000e+00 weaklyHypermeth 1.4752e-04 9.9992e-01 weaklyHypermeth 1.8913e-03 1.0000e+00 weaklyHypermeth 0.1739493 3.5405e-02 lowCoverage 2.7236e-01 lowCoverage 0.8647114 0.9132762 -2.7892e-02 6 0.8240652 0.8219955 0.00206973 4.5294e-01 1.5479e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.3371e-01 9.1025e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01118907 0.74556109 lowCoverage 1.00000 lowCoverage 0.7127660 0.9122995 -0.18724810 7 0.7108099 0.7306627 -0.01985274 9.9903e-01 1.9882e-04 weaklyHypometh 1.0000e+00 1.9666e-03 weaklyHypometh 9.9288e-01 5.2302e-04 weaklyHypometh 1.0000000 7.8063e-03 weaklyHypometh -0.1627602 4.4178e-02 weaklyHypometh 0.36815188 insignificant chr20 8980850 8981850 53888 ENSG00000222284 0.8896830 305 6 0.8128612 90 6 0.6923909 118 6 0.8976708 126 6 0.9002525 64 6 0.8896516 179 6 0.7793417 115 6 0.9530303 74 6 0.9133838 106 6 0.9079670 79 6 0.8343264 145 6 0.9292929 64 6 0.9760684 84 6 NA 0 0 0.9351852 111 6 0.8727273 74 6 0.8595238 67 6 0.91985396 180 6 0.9419753 133 6 0.8742608 271 6 0.7166667 48 6 0.9124278 66 6 0.8330402 168 6 0.8557968 79 6 0.9490741 58 6 0.9372294 131 6 0.8849808 74 6 0.7857143 37 6 0.9148384 87 6 0.81753496 98 6 0.8794472 85 6 0.9169821 258 6 0.9039661 78 6 0.8148148 104 6 0.5085979 59 2 0.8634990 96 6 0.730349 97 6 0.82716189 87 6 0.9316972 278 6 0.9008240 277 6 0.9098917 224 6 0.9517399 255 6 0.8474591 334 6 0.8875210 0.8091718 0.6969091 0.8948656 0.9049259 0.8896801 0.7747263 0.95171192 0.9111701 0.90834166 0.8328135 0.9282763 0.97418137 NA 0.9280904 0.86957891 0.8548547 0.9180403 0.94188713 0.8726222 0.7385281 0.90724968 0.8279592 0.85540807 0.9434824 0.9343341 0.8888561 0.8041641 0.9175527 0.81980108 0.88194755 0.9163410 0.8930076 0.8003848 0.5131760 8.6069e-01 0.7486197 0.8200130 0.9289764 0.9039686 0.9089091 0.9516241 0.8450230 6 0.8838574 0.8814130 -5.5333e-04 6 0.8804310 0.8802216 0.00020940 7.0851e-01 5.8033e-01 insignificant 1.00000000 1.0000e+00 insignificant 3.9652e-01 8.4382e-01 insignificant 1.0000000 1.000000 insignificant 0.01615106 0.525885 insignificant 1 insignificant 0.8838574 0.7984645 0.07895066 6 0.8804310 0.8059317 0.0744993 1.7341e-04 9.7324e-01 weaklyHypermeth 1.3137e-03 1.0000e+00 weaklyHypermeth 2.8196e-02 9.6276e-01 weaklyHypermeth 1.8924e-01 1.0000e+00 insignificant 1.0840e-01 1.2445e-01 insignificant 7.4076e-01 insignificant 0.8838574 0.9225146 -0.02733532 6 0.8804310 0.9067804 -0.0263494 9.4829e-01 9.1818e-02 insignificant 1.0000e+00 8.3588e-01 insignificant 8.9041e-01 2.0084e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -2.5194e-02 3.0370e-01 insignificant 1.0000000 insignificant 0.8814130 0.7984645 0.07873742 6 0.8802216 0.8059317 0.0742899 1.2247e-03 9.8335e-01 weaklyHypermeth 8.8744e-03 1.0000e+00 weaklyHypermeth 5.0043e-02 8.5542e-01 insignificant 3.0457e-01 1.0000e+00 insignificant 0.0922464 1.8292e-01 insignificant 9.7818e-01 insignificant 0.8814130 0.9225146 -2.6897e-02 6 0.8802216 0.9067804 -0.02655875 9.7629e-01 1.0470e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8547e-01 2.0097e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04134467 0.14296799 insignificant 1.00000 insignificant 0.7984645 0.9225146 -0.10577744 6 0.8059317 0.9067804 -0.10084863 9.9964e-01 1.9164e-03 weaklyHypometh 1.0000e+00 1.4301e-02 weaklyHypometh 9.8786e-01 2.8372e-02 weaklyHypometh 1.0000000 2.0411e-01 insignificant -0.1335910 7.1302e-02 insignificant 0.50930338 insignificant chr20 17763750 17764750 54072 BANF2 ENSG00000125888 0.8587717 298 7 0.8695297 225 6 0.887798 137 7 0.819995 213 6 0.846372 88 4 0.959801 404 4 0.963959 128 4 0.941699 170 6 0.8853383 89 4 0.9638975 62 5 0.942182 339 6 0.9278752 29 2 0.967584 92 6 0.972222 67 6 0.9391021 123 6 0.584561 51 2 0.0000000 3 0 0.783494 218 6 0.9295413 287 6 0.873957 413 6 0.888277 127 6 0.952614 50 2 0.908945 210 7 0.936647 115 7 0.827778 40 3 0.922146 273 7 0.894031 159 6 0.770726 70 5 0.9543076 175 6 0.896515 268 7 0.9347154 278 7 0.9388364 453 6 0.4233064 263 7 0.6110896 198 6 0.3947368 212 4 0.6296296 17 2 0.302274 223 6 0.4528254 434 7 0.922919 445 6 0.9485047 371 6 0.907267 217 6 0.963736 254 6 0.864824 217 4 0.8955621 0.8024393 0.9205955 0.9267727 0.9492460 0.945538 0.9598819 0.918658 0.9100329 0.8706988 0.9428770 0.8989548 0.9439105 0.9033333 0.925564 0.7322552 0.1756310 0.8259169 0.9251121 0.916000 0.9074461 0.870903 0.877372 0.8869988 0.8900000 0.9192687 0.858792 0.8192949 0.8971014 0.913855 0.9128004 0.9161856 0.1396026 0.2232010 0.1614461 0.41852609 0.1365219 0.17273484 0.9404055 0.9521073 0.94463481 0.9366236 0.9059935 2 0.907024 0.899910 8.2963e-03 6 0.903519 0.907996 -0.0044771 0.58115006 0.6717568 insignificant 1.00000 1.00000 insignificant 0.4060661 0.8539092 insignificant 1 1.00000 insignificant -0.05624413 0.28415632 lowCoverage 1.00000 lowCoverage 0.907024 0.2494432 0.6526634 6 0.903519 0.4544861 0.4490327 7.4790e-43 1.0000e+00 hypermethylated 5.7531e-41 1.0000e+00 hypermethylated 1.1788e-08 1.0000e+00 hypermethylated 4.9119e-07 1.0000000 hypermethylated 0.37690699 1.0125e-04 lowCoverage 2.5313e-03 lowCoverage 0.907024 0.9368351 -0.02984741 6 0.903519 0.935846 -0.0323270 9.5993e-01 9.1641e-02 insignificant 1.0000e+00 1.000000 insignificant 6.1341e-01 0.10351337 insignificant 1.0000000 1.00000 insignificant -0.0755662 0.15826376 lowCoverage 1.000000 lowCoverage 0.899910 0.2494432 0.6056745 7 0.907996 0.4544861 4.5351e-01 4.0124e-37 1.0000e+00 hypermethylated 3.6476e-35 1.0000e+00 hypermethylated 6.0012e-09 0.9999998 hypermethylated 3.0006e-07 1.00000 hypermethylated 0.43315112 2.2489e-04 hypermethylated 5.7664e-03 hypermethylated 0.899910 0.9368351 -0.03431091 6 0.907996 0.935846 -0.0278500 8.3773e-01 9.0874e-03 weaklyHypometh 1.0000e+00 0.6990304 insignificant 7.7531e-01 0.02378137 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.0193220 0.42468629 insignificant 1.00000 insignificant 0.2494432 0.9368351 -0.6963103 6 0.4544861 0.935846 -0.48135977 1.00000000 4.3334e-22 hypomethylated 1.00000 3.9394e-20 hypomethylated 0.9999972 6.9093e-06 hypomethylated 1 3.0607e-04 hypomethylated -0.4524732 1.6453e-04 hypomethylated 7.6770e-03 hypomethylated chr20 17838950 17839950 54077 ENSG00000212555 0.6584045 372 9 0.7571249 298 9 0.721995 198 9 0.758255 255 9 0.574287 139 9 0.710849 408 9 0.758195 183 9 0.770275 172 7 0.6906136 194 9 0.7785663 137 8 0.721978 350 9 0.8467909 98 7 0.827039 174 9 0.761458 46 6 0.7811904 211 9 0.829630 77 5 0.7746847 373 6 0.772378 437 9 0.7091728 238 9 0.772263 399 9 0.685816 120 7 0.709414 131 6 0.780910 278 9 0.845569 141 9 0.753280 194 9 0.774304 253 9 0.676673 219 7 0.706326 81 7 0.5766649 176 9 0.819259 240 9 0.8417973 229 9 0.6026295 415 9 0.5129755 268 9 0.6385158 155 9 0.5376544 245 7 0.6469697 54 7 0.675983 190 9 0.6614743 281 9 0.716106 345 9 0.8440079 402 9 0.749126 333 9 0.803770 332 9 0.851767 346 9 0.8696285 0.7897048 0.8450420 0.8118112 0.8305654 0.868382 0.8264508 0.781980 0.8096239 0.8302266 0.8339706 0.8862503 0.9007342 0.8711604 0.854487 0.8988636 0.8093073 0.8338440 0.8734517 0.835228 0.8025466 0.765270 0.825444 0.8465736 0.8039235 0.7861718 0.805057 0.8582311 0.8161097 0.889347 0.8885772 0.8563709 0.6599139 0.7375869 0.6899184 0.71330923 0.7060550 0.71888377 0.8271158 0.8821935 0.88381833 0.8775975 0.8733124 5 0.806682 0.823173 -4.5679e-03 9 0.709930 0.686504 0.0234260 0.62626648 0.3514126 insignificant 1.00000 1.00000 insignificant 0.5947099 0.7422748 insignificant 1 1.00000 insignificant 0.01770393 0.54727567 insignificant 1.00000 insignificant 0.806682 0.5666387 0.2385283 9 0.709930 0.5946830 0.1152471 5.1604e-12 6.6228e-01 hypermethylated 1.0980e-10 1.0000e+00 hypermethylated 6.8490e-06 9.7331e-01 hypermethylated 2.0144e-04 1.0000000 hypermethylated 0.13649543 2.7669e-03 weaklyHypermeth 4.9409e-02 weaklyHypermeth 0.806682 0.8401593 -0.02482068 9 0.709930 0.777565 -0.0676352 9.9556e-01 6.1460e-05 weaklyHypometh 1.0000e+00 0.020454 weaklyHypometh 8.5544e-01 0.00446725 weaklyHypometh 1.0000000 0.40606 insignificant -0.0441980 0.18663167 insignificant 1.000000 insignificant 0.823173 0.5666387 0.1898205 9 0.686504 0.5946830 9.1821e-02 3.4054e-11 9.8887e-01 weaklyHypermeth 8.1082e-10 1.0000e+00 weaklyHypermeth 2.4700e-04 0.9974644 weaklyHypermeth 4.4909e-03 1.00000 weaklyHypermeth 0.11879150 8.1222e-03 weaklyHypermeth 1.3124e-01 insignificant 0.823173 0.8401593 -0.02622762 9 0.686504 0.777565 -0.0910612 8.4931e-01 5.8773e-04 weaklyHypometh 1.0000e+00 0.0839617 weaklyHypometh 9.5130e-01 0.00489377 weaklyHypometh 1.0000e+00 0.69911 insignificant -0.0619019 0.11835579 insignificant 1.00000 insignificant 0.5666387 0.8401593 -0.2636173 9 0.5946830 0.777565 -0.18288235 0.99999916 4.2195e-13 hypomethylated 1.00000 2.1098e-11 hypomethylated 0.9999999 7.5119e-07 hypomethylated 1 4.4188e-05 hypomethylated -0.1806934 1.1677e-03 weaklyHypometh 3.4412e-02 weaklyHypometh chr20 22358350 22359350 54131 ENSG00000204684 0.0525075 264 5 0.0274912 381 5 0.054054 166 5 0.039234 248 5 0.020000 138 5 0.152145 355 5 0.066117 158 5 0.054318 273 5 0.0633598 290 5 0.0764734 157 5 0.083841 191 5 0.1182796 152 5 0.000000 183 5 0.036326 147 5 0.0351114 382 5 0.053166 131 5 0.0000000 30 4 0.062051 270 5 0.0046512 197 5 0.034034 275 5 0.193651 65 7 0.025000 107 5 0.099196 171 5 0.056818 167 5 0.087395 52 5 0.047149 396 5 0.229650 169 5 0.023623 235 5 0.0071429 245 5 0.017777 483 5 0.0065565 314 5 0.1322235 218 5 0.1898701 211 5 0.3222222 83 5 0.0000000 237 5 0.0666667 11 0 0.158289 258 5 0.1967959 235 5 0.019170 336 5 0.0600568 195 5 0.019012 192 5 0.070303 169 5 0.017835 156 5 0.0650936 0.0346085 0.0569656 0.0413478 0.0210773 0.157478 0.0672208 0.055622 0.0646351 0.0779637 0.1218503 0.1201682 0.0000000 0.0521552 0.036747 0.0658760 0.0000000 0.0775555 0.0049017 0.055257 0.2014052 0.026347 0.143352 0.0958058 0.0900951 0.0495173 0.078475 0.0334820 0.0075276 0.021744 0.0065601 0.1375612 0.2348660 0.3395785 0.0000000 0.07025761 0.1973747 0.20739611 0.0199990 0.0616891 0.01932595 0.0715350 0.0172045 5 0.063582 0.053776 7.7531e-03 5 0.033330 0.100063 -0.0667335 0.77007111 0.6937476 insignificant 1.00000 1.00000 insignificant 0.9516862 0.8503237 insignificant 1 1.00000 insignificant -0.02552376 0.28602998 lowCoverage 1.00000 lowCoverage 0.063757 0.1574879 -0.0997045 5 0.042852 0.1185770 -0.0757246 9.9971e-01 2.8049e-04 weaklyHypometh 1.0000e+00 2.5499e-02 weaklyHypometh 9.6785e-01 2.1225e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.10398251 7.2180e-02 lowCoverage 5.9653e-01 lowCoverage 0.063903 0.0362595 0.02534501 5 0.059993 0.035713 0.0242808 1.5470e-01 7.4988e-01 insignificant 1.0000e+00 1.000000 insignificant 2.2311e-01 0.59706745 insignificant 1.0000000 1.00000 insignificant 0.0143827 0.33940231 lowCoverage 1.000000 lowCoverage 0.052450 0.1574879 -0.1080867 5 0.057224 0.1185770 -6.1353e-02 9.9889e-01 3.9317e-03 weaklyHypometh 1.0000e+00 3.9317e-01 insignificant 9.5506e-01 0.3503251 insignificant 1.0000e+00 1.00000 insignificant -0.07845875 1.6272e-01 lowCoverage 1.0000e+00 lowCoverage 0.052408 0.0362595 0.01679945 5 0.051542 0.035713 0.0158296 5.4443e-01 5.9940e-01 insignificant 1.0000e+00 1.0000000 insignificant 5.9338e-01 0.23904062 insignificant 1.0000e+00 1.00000 insignificant 0.0399064 0.12219079 insignificant 1.00000 insignificant 0.1577928 0.0362595 0.1231295 5 0.1660078 0.035713 0.13029521 0.01469037 9.9529e-01 weaklyHypermeth 0.77295 1.0000e+00 insignificant 0.3435745 4.9785e-01 insignificant 1 1.0000e+00 insignificant 0.1183652 4.8545e-02 lowCoverage 5.0951e-01 lowCoverage chr20 25238250 25239250 54194 PYGB ENSG00000100994 0.8908566 302 5 0.7601842 130 5 0.705847 140 5 0.902591 219 5 0.904558 79 5 0.880788 209 5 0.908452 145 5 0.882139 88 5 0.8214235 104 5 0.9607656 84 5 0.950606 165 5 0.7719172 80 5 0.875399 150 5 0.750000 12 2 0.8934913 135 5 0.895000 42 5 0.8402778 46 4 0.502487 225 5 0.8944486 117 5 0.924989 210 5 0.894444 50 4 0.660464 80 5 0.902669 203 5 0.908333 22 3 0.641898 263 5 0.896458 157 5 0.897772 89 5 0.924402 55 5 0.6694750 106 5 0.951667 149 5 0.8852793 137 5 0.9059397 326 5 0.3584241 107 5 0.0658730 151 5 0.0000000 10 0 0.2538975 135 5 0.152996 97 5 0.1844687 236 5 0.899838 266 5 0.6708105 231 5 0.786542 155 5 0.796720 255 5 0.878658 277 5 0.8993913 0.7731530 0.7033277 0.9009844 0.9184623 0.868704 0.9098534 0.844818 0.8221486 0.9690905 0.9463651 0.7531130 0.8773611 0.8021233 0.896275 0.9239437 0.8817189 0.6066317 0.8824683 0.928803 0.8708920 0.636349 0.894516 0.9171345 0.8001870 0.9031773 0.891707 0.9219624 0.7872018 0.944535 0.8744389 0.9184147 0.3395815 0.0547731 0.0353557 0.24436588 0.1878159 0.16049421 0.8936519 0.6722120 0.77719583 0.7944721 0.8691051 5 0.852349 0.857930 -4.3861e-03 5 0.747363 0.852183 -0.1048206 0.70913307 0.5011814 insignificant 1.00000 1.00000 insignificant 0.8446570 0.3697584 insignificant 1 1.00000 insignificant 0.00091092 0.98234258 lowCoverage 1.00000 lowCoverage 0.851852 0.1866485 0.6725921 5 0.705256 0.1613408 0.5439156 1.4806e-43 1.0000e+00 hypermethylated 1.2339e-41 1.0000e+00 hypermethylated 2.9824e-13 1.0000e+00 hypermethylated 2.0455e-11 1.0000000 hypermethylated 0.67653449 6.1394e-06 lowCoverage 1.8604e-04 lowCoverage 0.852171 0.8091216 0.04372743 5 0.846308 0.812360 0.0339480 1.4443e-01 9.1090e-01 insignificant 1.0000e+00 1.000000 insignificant 6.7326e-02 0.95895052 insignificant 1.0000000 1.00000 insignificant 0.0392974 0.43000848 lowCoverage 1.000000 lowCoverage 0.856181 0.1861413 0.6713636 5 0.662327 0.1210056 5.4132e-01 4.2885e-32 1.0000e+00 hypermethylated 2.3825e-30 1.0000e+00 hypermethylated 3.0199e-10 1.0000000 hypermethylated 2.0132e-08 1.00000 hypermethylated 0.67562357 1.6089e-06 lowCoverage 6.1880e-05 lowCoverage 0.858108 0.8091216 0.04807606 5 0.859723 0.812360 0.0473635 8.5915e-02 9.7633e-01 insignificant 1.0000e+00 1.0000000 insignificant 4.4294e-02 0.99814765 weaklyHypermeth 7.2613e-01 1.00000 insignificant 0.0383865 0.48053508 lowCoverage 1.00000 lowCoverage 0.1869031 0.8091216 -0.6301288 5 0.1936090 0.812360 -0.61875073 1.00000000 2.6040e-19 hypomethylated 1.00000 1.8600e-17 hypomethylated 1.0000000 1.4420e-08 hypomethylated 1 1.1093e-06 hypomethylated -0.6372371 5.7873e-06 lowCoverage 1.1575e-03 lowCoverage chr20 25238550 25239550 54195 PYGB ENSG00000100994 0.8908566 302 5 0.7601842 130 5 0.705847 140 5 0.902591 219 5 0.904558 79 5 0.880788 209 5 0.908452 145 5 0.882139 88 5 0.8214235 104 5 0.9607656 84 5 0.950606 165 5 0.7719172 80 5 0.875399 150 5 0.750000 12 2 0.8934913 135 5 0.895000 42 5 0.8402778 46 4 0.502487 225 5 0.8944486 117 5 0.924989 210 5 0.894444 50 4 0.660464 80 5 0.902669 203 5 0.908333 22 3 0.641898 263 5 0.896458 157 5 0.897772 89 5 0.924402 55 5 0.6694750 106 5 0.951667 149 5 0.8852793 137 5 0.9059397 326 5 0.3584241 107 5 0.0658730 151 5 0.0000000 10 0 0.2538975 135 5 0.152996 97 5 0.1844687 236 5 0.899838 266 5 0.6708105 231 5 0.786542 155 5 0.796720 255 5 0.878658 277 5 0.8993913 0.7731530 0.7033277 0.9009844 0.9184623 0.868704 0.9098534 0.844818 0.8221486 0.9690905 0.9463651 0.7531130 0.8773611 0.8021233 0.896275 0.9239437 0.8817189 0.6066317 0.8824683 0.928803 0.8708920 0.636349 0.894516 0.9171345 0.8001870 0.9031773 0.891707 0.9219624 0.7872018 0.944535 0.8744389 0.9184147 0.3395815 0.0547731 0.0353557 0.24436588 0.1878159 0.16049421 0.8936519 0.6722120 0.77719583 0.7944721 0.8691051 5 0.852349 0.857930 -4.3861e-03 5 0.747363 0.852183 -0.1048206 0.70913307 0.5011814 insignificant 1.00000 1.00000 insignificant 0.8446570 0.3697584 insignificant 1 1.00000 insignificant 0.00091092 0.98234258 lowCoverage 1.00000 lowCoverage 0.851852 0.1866485 0.6725921 5 0.705256 0.1613408 0.5439156 1.4806e-43 1.0000e+00 hypermethylated 1.2339e-41 1.0000e+00 hypermethylated 2.9824e-13 1.0000e+00 hypermethylated 2.0455e-11 1.0000000 hypermethylated 0.67653449 6.1394e-06 lowCoverage 1.8604e-04 lowCoverage 0.852171 0.8091216 0.04372743 5 0.846308 0.812360 0.0339480 1.4443e-01 9.1090e-01 insignificant 1.0000e+00 1.000000 insignificant 6.7326e-02 0.95895052 insignificant 1.0000000 1.00000 insignificant 0.0392974 0.43000848 lowCoverage 1.000000 lowCoverage 0.856181 0.1861413 0.6713636 5 0.662327 0.1210056 5.4132e-01 4.2885e-32 1.0000e+00 hypermethylated 2.3825e-30 1.0000e+00 hypermethylated 3.0199e-10 1.0000000 hypermethylated 2.0132e-08 1.00000 hypermethylated 0.67562357 1.6089e-06 lowCoverage 6.1880e-05 lowCoverage 0.858108 0.8091216 0.04807606 5 0.859723 0.812360 0.0473635 8.5915e-02 9.7633e-01 insignificant 1.0000e+00 1.0000000 insignificant 4.4294e-02 0.99814765 weaklyHypermeth 7.2613e-01 1.00000 insignificant 0.0383865 0.48053508 lowCoverage 1.00000 lowCoverage 0.1869031 0.8091216 -0.6301288 5 0.1936090 0.812360 -0.61875073 1.00000000 2.6040e-19 hypomethylated 1.00000 1.8600e-17 hypomethylated 1.0000000 1.4420e-08 hypomethylated 1 1.1093e-06 hypomethylated -0.6372371 5.7873e-06 lowCoverage 1.1575e-03 lowCoverage chr20 25477350 25478350 54198 NINL ENSG00000101004 0.9081197 146 10 0.9337583 209 13 0.736071 305 13 0.992063 69 2 0.903379 296 13 0.906210 188 9 0.950136 318 13 0.873706 170 13 0.9233624 231 13 0.9466004 229 13 0.933635 412 13 0.9223736 279 13 0.921597 252 13 0.973684 26 2 0.9220147 293 13 0.869508 152 11 0.8860251 161 13 0.889877 93 5 0.9419959 225 12 0.940134 192 13 0.978632 131 13 0.804916 45 2 0.940080 228 13 0.921105 113 10 0.944444 31 1 0.882519 196 13 0.908005 178 11 0.975234 172 13 0.9007212 144 9 0.932063 211 13 0.9339762 161 13 0.9460042 303 12 0.7977087 174 12 0.7917763 192 8 0.8081037 355 11 0.9642857 31 2 0.831224 114 10 0.9532951 168 13 0.879170 131 6 0.9498359 117 8 0.882943 78 3 0.945286 57 4 0.969362 80 4 0.9426678 0.9274282 0.7677706 0.9664202 0.8717611 0.911273 0.9166405 0.840099 0.8781071 0.9574993 0.9518459 0.8773459 0.9261453 NA 0.902902 0.8484951 0.8365888 0.9211881 0.9345247 0.904652 0.9943598 0.887375 0.949149 0.9184516 0.9781726 0.8892318 0.912001 0.9735187 0.8948042 0.914511 0.9175933 0.9652146 0.8131239 0.6542320 0.8940764 0.95765706 0.7606676 0.95731736 0.9523386 0.9098051 0.96457736 0.8765492 0.9356302 1 0.907442 0.933612 -2.6493e-02 13 0.908199 0.931715 -0.0235160 0.99804248 0.0153398 weaklyHypometh 1.00000 0.84839 insignificant 0.9960454 0.0366662 weaklyHypometh 1 1.00000 insignificant -0.00859571 0.63179438 insignificant 1.00000 insignificant 0.907442 0.8181818 0.0896712 13 0.908199 0.8182770 0.0899222 9.4643e-10 9.9364e-01 weaklyHypermeth 1.5515e-08 1.0000e+00 weaklyHypermeth 1.6233e-02 9.8731e-01 weaklyHypermeth 1.5460e-01 1.0000000 insignificant 0.05598022 1.5293e-01 insignificant 1.0000e+00 insignificant 0.907442 0.9265659 -0.02454549 6 0.908199 0.927979 -0.0197798 9.4791e-01 4.1064e-03 weaklyHypometh 1.0000e+00 0.256649 insignificant 9.9962e-01 0.00114295 weaklyHypometh 1.0000000 0.31959 insignificant -0.0116069 0.61096876 insignificant 1.000000 insignificant 0.933612 0.8181818 0.1084066 13 0.931715 0.8182770 1.1344e-01 1.9096e-09 9.9998e-01 weaklyHypermeth 3.8971e-08 1.0000e+00 weaklyHypermeth 4.7707e-03 0.9994730 weaklyHypermeth 5.0752e-02 1.00000 weaklyHypermeth 0.06457593 1.0997e-01 insignificant 8.4589e-01 insignificant 0.933612 0.9265659 0.01158938 6 0.931715 0.927979 0.0037362 6.6306e-01 1.5731e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.7200e-01 0.05751686 insignificant 1.0000e+00 1.00000 insignificant -0.0030111 0.89825086 insignificant 1.00000 insignificant 0.8181818 0.9265659 -0.1228905 6 0.8182770 0.927979 -0.10970204 0.99983023 4.7084e-06 weaklyHypometh 1.00000 9.8092e-05 weaklyHypometh 0.9999851 4.0596e-03 weaklyHypometh 1 6.4439e-02 weaklyHypometh -0.0675871 1.0930e-01 insignificant 9.0334e-01 insignificant chr20 29547950 29548950 54201 REM1 ENSG00000088320 0.7883440 171 5 0.6902234 164 6 0.608429 252 6 0.784547 128 3 0.850608 140 6 0.746435 227 5 0.726038 170 6 0.671198 109 6 0.6463716 190 6 0.7661941 173 6 0.877823 172 6 0.6464138 180 6 0.577769 190 6 0.770468 53 3 0.7825170 181 6 0.669780 90 4 0.5289099 85 6 0.567622 159 3 0.7466931 93 6 0.746373 165 6 0.813104 75 6 0.625144 114 3 0.806631 234 6 0.767547 80 5 0.847013 72 3 0.744711 156 5 0.587561 141 6 0.747795 102 6 0.6528042 171 6 0.558442 172 5 0.5590278 182 6 0.7973596 323 6 0.0088889 244 6 0.0000000 139 6 0.0095238 156 5 0.0000000 51 5 0.028446 119 6 0.0045045 162 6 0.774904 194 5 0.7680178 216 6 0.580534 153 5 0.778183 142 5 0.786045 165 5 0.6921895 0.6450693 0.5402581 0.7959382 0.8226195 0.715734 0.6694188 0.642389 0.5953677 0.7298756 0.8817507 0.5260932 0.5009654 0.7685193 0.722837 0.4729334 0.4696664 0.5891212 0.6676291 0.704922 0.8255575 0.503545 0.733942 0.6805512 0.7374687 0.7046593 0.578665 0.6589276 0.6392510 0.524838 0.5134484 0.7338161 0.0078607 0.0000000 0.0136816 0.00000000 0.0269356 0.00776523 0.6616087 0.7042732 0.57803934 0.7286089 0.7191879 3 0.700517 0.670143 2.6761e-02 6 0.718697 0.698234 0.0204636 0.10562514 0.8025332 insignificant 1.00000 1.00000 insignificant 0.5111766 0.5970669 insignificant 1 1.00000 insignificant 0.00070934 0.98493951 insignificant 1.00000 insignificant 0.700517 0.0091848 0.6976112 6 0.718697 0.0100666 0.7086306 5.9576e-62 1.0000e+00 hypermethylated 6.6195e-60 1.0000e+00 hypermethylated 3.3542e-16 1.0000e+00 hypermethylated 3.3542e-14 1.0000000 hypermethylated 0.70107734 3.8180e-19 hypermethylated 1.2727e-16 hypermethylated 0.700517 0.6908046 -0.01798732 5 0.718697 0.766674 -0.0479763 9.2065e-01 4.0285e-02 weaklyHypometh 1.0000e+00 0.962444 insignificant 8.4250e-01 0.09056527 insignificant 1.0000000 1.00000 insignificant -0.0278988 0.55322397 insignificant 1.000000 insignificant 0.670143 0.0091848 0.6644631 6 0.698234 0.0100666 6.8817e-01 5.5562e-45 1.0000e+00 hypermethylated 6.1736e-43 1.0000e+00 hypermethylated 9.8249e-15 1.0000000 hypermethylated 9.8249e-13 1.00000 hypermethylated 0.70036800 7.3305e-11 hypermethylated 1.8326e-08 hypermethylated 0.670143 0.6908046 -0.04113318 5 0.698234 0.766674 -0.0684398 9.7761e-01 5.1193e-02 insignificant 1.0000e+00 1.0000000 insignificant 9.4029e-01 0.21275459 insignificant 1.0000e+00 1.00000 insignificant -0.0286082 0.57995824 insignificant 1.00000 insignificant 0.0091848 0.6908046 -0.6966855 5 0.0100666 0.766674 -0.75660686 1.00000000 5.2527e-41 hypomethylated 1.00000 1.3132e-38 hypomethylated 1.0000000 5.5650e-10 hypomethylated 1 6.9563e-08 hypomethylated -0.7289762 4.2910e-05 hypomethylated 2.9910e-03 hypomethylated chr20 29712650 29713650 54208 COX4I2 ENSG00000131055 0.2511982 282 11 0.1322052 267 10 0.188829 349 10 0.298953 256 11 0.172020 278 10 0.217081 453 11 0.147478 300 5 0.347173 240 6 0.1724742 215 6 0.2212121 104 6 0.185759 338 10 0.1385455 145 5 0.372054 98 6 0.294118 81 5 0.3794737 122 6 0.167892 92 6 0.4634146 47 2 0.289734 185 6 0.1583423 232 7 0.294412 310 7 0.296685 83 6 0.521053 34 2 0.250287 268 8 0.181371 175 6 0.361111 39 5 0.142401 336 10 0.172962 239 6 0.235477 114 6 0.1585189 323 6 0.231748 387 10 0.1345882 467 10 0.2005754 479 11 0.0958462 305 10 0.0843137 258 6 0.1666667 234 6 0.3173913 152 6 0.090948 273 10 0.0860215 454 11 0.199881 365 14 0.2504082 286 14 0.225518 201 11 0.245028 135 11 0.246881 297 14 0.2804771 0.2289544 0.3234549 0.2731854 0.2953867 0.378615 0.2074018 0.353699 0.2942671 0.3763168 0.3093455 0.2415529 0.3787445 0.3167955 0.385058 0.2866806 NA 0.1553146 0.2743479 0.314636 0.3060855 0.264918 0.342071 0.3122412 0.3708155 0.3645055 0.298100 0.4001157 0.2743131 0.305716 0.3405500 0.3009333 0.1681570 0.1480266 0.1872660 0.00518909 0.1598897 0.15315218 0.3060975 0.3255680 0.20023602 0.3156310 0.4167923 6 0.234261 0.235014 -8.9968e-03 7 0.276290 0.185190 0.0910998 0.34289311 0.3011061 insignificant 1.00000 1.00000 insignificant 0.6663698 0.7038430 insignificant 1 1.00000 insignificant 0.00405361 0.91641557 insignificant 1.00000 insignificant 0.234208 0.0746714 0.1242487 7 0.276290 0.1705281 0.1057615 4.2730e-10 1.0000e+00 weaklyHypermeth 7.6303e-09 1.0000e+00 weaklyHypermeth 7.2972e-06 1.0000e+00 weaklyHypermeth 2.0849e-04 1.0000000 weaklyHypermeth 0.10442048 4.0425e-02 weaklyHypermeth 3.9753e-01 insignificant 0.234140 0.1996880 -0.00586190 7 0.249971 0.237728 0.0122424 6.9548e-01 9.4317e-03 weaklyHypometh 1.0000e+00 0.430700 insignificant 9.2934e-01 0.08142070 insignificant 1.0000000 1.00000 insignificant 0.0110751 0.63537151 insignificant 1.000000 insignificant 0.234774 0.0752239 0.1286157 7 0.185190 0.1968439 -1.1654e-02 3.1554e-09 9.8947e-01 weaklyHypermeth 6.1871e-08 1.0000e+00 weaklyHypermeth 4.0241e-05 0.9818560 weaklyHypermeth 9.8149e-04 1.00000 weaklyHypermeth 0.10036687 6.4672e-02 insignificant 5.6730e-01 insignificant 0.235014 0.2009346 -0.00224820 7 0.224663 0.317967 -0.0933040 9.7222e-01 3.7311e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.9497e-01 0.07560393 insignificant 1.0000e+00 1.00000 insignificant 0.0070215 0.83593088 insignificant 1.00000 insignificant 0.0746714 0.2003118 -0.1148967 11 0.1522241 0.280077 -0.12785265 0.99996355 2.1057e-07 weaklyHypometh 1.00000 5.5414e-06 weaklyHypometh 0.9999996 6.7410e-06 weaklyHypometh 1 3.0607e-04 weaklyHypometh -0.0933454 5.5778e-02 insignificant 5.4685e-01 insignificant chr20 29714550 29715550 54209 COX4I2 ENSG00000131055 0.8618680 211 6 0.7512007 116 6 0.693531 102 6 0.889579 110 6 0.819084 65 5 0.857472 157 6 0.795950 71 6 0.797604 61 5 0.7854167 57 4 0.8586640 100 6 0.767996 126 6 0.8537037 74 6 0.688694 80 5 NA 0 0 0.8815398 71 6 0.812927 63 6 0.6843137 78 6 0.828711 109 6 0.7667063 107 6 0.867891 182 6 0.522857 30 3 0.817424 44 3 0.884347 101 6 0.900794 29 3 0.777778 23 0 0.676818 99 6 0.820990 72 5 0.730769 42 3 0.8519841 58 5 0.769103 113 6 0.7367424 101 6 0.8283765 228 6 0.7006320 78 5 0.6664562 122 6 0.7703810 105 6 0.7874332 76 6 0.873504 49 3 0.7602958 105 6 0.863079 180 6 0.8654781 187 6 0.843333 141 6 0.816685 220 6 0.857197 183 6 0.8293093 0.7099168 0.6707354 0.8780255 0.8402883 0.859719 0.8465165 0.806902 0.7737944 0.8631053 0.7868655 0.8790962 0.7346721 NA 0.855440 0.8033906 0.7196775 0.8258351 0.7886705 0.846464 0.7058328 0.771343 0.892234 0.8489243 0.7711506 0.7274050 0.812408 0.7622023 0.8250181 0.787388 0.8069143 0.8180265 0.6335759 0.6226093 0.6869972 0.76204566 0.8070285 0.75154416 0.8866377 0.8873610 0.84194739 0.8120661 0.8374540 3 0.813402 0.804255 6.9059e-03 6 0.812099 0.800014 0.0120844 0.44559324 0.6707199 insignificant 1.00000 1.00000 insignificant 0.6476490 0.5134966 insignificant 1 1.00000 insignificant 0.02680938 0.43216118 lowCoverage 1.00000 lowCoverage 0.813402 0.7158879 0.0966152 6 0.812099 0.7329579 0.0791410 1.2430e-05 9.8643e-01 weaklyHypermeth 1.4125e-04 1.0000e+00 weaklyHypermeth 1.3881e-03 6.5795e-01 weaklyHypermeth 1.7352e-02 1.0000000 weaklyHypermeth 0.04352423 2.2483e-01 insignificant 1.0000e+00 insignificant 0.813402 0.8518112 -0.04087304 6 0.812099 0.849964 -0.0378647 9.6469e-01 4.7656e-02 weaklyHypometh 1.0000e+00 0.992835 insignificant 9.7190e-01 0.06896652 insignificant 1.0000000 1.00000 insignificant -0.0458464 0.01539988 weaklyHypometh 0.535072 insignificant 0.804255 0.7158879 0.0926866 6 0.800014 0.7329579 6.7057e-02 1.1645e-05 9.2377e-01 weaklyHypermeth 1.4377e-04 1.0000e+00 weaklyHypermeth 7.4572e-04 0.8315876 weaklyHypermeth 1.0653e-02 1.00000 weaklyHypermeth 0.01671484 6.9594e-01 lowCoverage 1.0000e+00 lowCoverage 0.804255 0.8518112 -0.04901786 6 0.800014 0.849964 -0.0499491 9.7018e-01 1.0583e-02 weaklyHypometh 1.0000e+00 0.7559259 insignificant 8.9853e-01 0.05103007 insignificant 1.0000e+00 1.00000 insignificant -0.0726558 0.03648423 lowCoverage 1.00000 lowCoverage 0.7158879 0.8518112 -0.1385017 6 0.7329579 0.849964 -0.11700572 0.99466004 1.0228e-05 weaklyHypometh 1.00000 2.0055e-04 weaklyHypometh 0.9293576 1.0532e-03 weaklyHypometh 1 2.4476e-02 weaklyHypometh -0.0893707 2.7718e-02 weaklyHypometh 3.5535e-01 insignificant chr20 30526050 30527050 54241 ASXL1 ENSG00000171456 0.2330461 165 9 0.2615054 467 11 0.408300 346 11 0.490848 134 8 0.294385 237 9 0.406796 261 9 0.283800 347 9 0.271312 261 9 0.2955556 291 9 0.4297333 197 9 0.352947 447 9 0.3113730 315 9 0.257860 309 9 0.625502 99 5 0.2127382 260 9 0.305143 243 8 0.0841856 227 4 0.379032 130 5 0.2839083 453 9 0.438484 213 9 0.462737 169 9 0.230292 80 5 0.318489 153 10 0.329735 169 9 0.402875 61 5 0.298537 423 11 0.236176 157 9 0.160372 136 9 0.3498435 342 9 0.322308 541 11 0.3600411 457 11 0.4683592 451 9 0.0038798 387 11 0.0185185 190 9 0.0833333 223 11 0.0000000 23 1 0.069151 352 9 0.0021097 485 11 0.265398 178 9 0.1358505 227 10 0.293117 92 6 0.104416 88 8 0.380088 128 6 0.3634427 0.2400568 0.4308619 0.5194867 0.3930774 0.527544 0.3690725 0.391491 0.3543320 0.4475013 0.4786774 0.3952415 0.3749759 0.4509804 0.279063 0.3267915 0.3388200 0.2835593 0.4140593 0.420478 0.4976969 0.228728 0.387631 0.4338398 0.4651210 0.3764871 0.281938 0.2180654 0.4755235 0.412250 0.3608431 0.4505342 0.0036155 0.0336345 0.0000000 0.00000000 0.0279182 0.00388897 0.2265183 0.1406183 0.30971092 0.1456173 0.3519692 6 0.323769 0.344168 4.0453e-03 9 0.432390 0.382177 0.0502127 0.21112961 0.6764469 insignificant 1.00000 1.00000 insignificant 0.3744760 0.7923031 insignificant 1 1.00000 insignificant 0.00300903 0.93571906 insignificant 1.00000 insignificant 0.323519 0.0108434 0.3366205 9 0.385089 0.0393232 0.3457658 1.9431e-42 1.0000e+00 hypermethylated 1.3880e-40 1.0000e+00 hypermethylated 2.1015e-20 1.0000e+00 hypermethylated 3.0021e-18 1.0000000 hypermethylated 0.30182401 4.9232e-10 hypermethylated 3.2821e-08 hypermethylated 0.323519 0.2187938 0.20117325 9 0.385089 0.256542 0.1285466 2.8416e-08 9.9824e-01 hypermethylated 7.1040e-06 1.000000 hypermethylated 2.3904e-05 0.99576298 hypermethylated 0.0056502 1.00000 hypermethylated 0.0955489 0.14453348 insignificant 1.000000 insignificant 0.344069 0.0108434 0.3450329 9 0.372359 0.0393232 3.3304e-01 1.5991e-34 1.0000e+00 hypermethylated 1.2301e-32 1.0000e+00 hypermethylated 1.5893e-19 1.0000000 hypermethylated 2.6488e-17 1.00000 hypermethylated 0.29881498 4.2361e-08 hypermethylated 2.3534e-06 hypermethylated 0.344069 0.2187938 0.20715913 9 0.372359 0.256542 0.1158162 5.4919e-07 9.5979e-01 hypermethylated 6.1021e-05 1.0000000 hypermethylated 8.8504e-04 0.97593858 hypermethylated 6.8080e-02 1.00000 hypermethylated 0.0925398 0.15674997 insignificant 1.00000 insignificant 0.0108434 0.2187938 -0.2060377 9 0.0393232 0.256542 -0.21721916 1.00000000 2.2183e-12 hypomethylated 1.00000 1.0083e-10 hypomethylated 1.0000000 2.6068e-09 hypomethylated 1 2.8965e-07 hypomethylated -0.2062751 1.3224e-02 weaklyHypometh 2.1719e-01 insignificant chr20 30587850 30588850 54245 C20orf112 ENSG00000197183 0.1743496 1030 29 0.1143560 841 28 0.019116 987 26 0.123313 1044 29 0.082008 770 30 0.243258 1253 31 0.132963 888 26 0.158412 951 28 0.1585126 1058 26 0.0273776 1166 28 0.154882 923 28 0.0049526 775 30 0.115510 712 27 0.062693 681 28 0.1309256 1128 28 0.003663 977 28 0.0416667 196 9 0.115582 1283 28 0.1020390 447 28 0.080603 887 28 0.130117 730 28 0.109227 613 19 0.065474 643 27 0.076608 637 28 0.197183 634 18 0.108015 1323 29 0.140518 977 31 0.085557 592 20 0.0819346 495 26 0.132960 1092 27 0.0986043 999 27 0.1249998 1578 31 0.1716823 827 25 0.0311251 547 26 0.1959225 824 20 0.0468227 184 21 0.137022 583 23 0.1927919 908 29 0.108691 1023 29 0.0969664 778 29 0.125921 738 29 0.144780 903 31 0.096947 808 29 0.0066670 0.0231432 0.0233963 0.0032404 0.0225849 0.047686 0.0217895 0.035131 0.0137812 0.0103877 0.0111615 0.0103955 0.0390231 0.0384088 0.026825 0.0103029 0.0011310 0.0057073 0.0234170 0.042289 0.0194642 0.030100 0.024155 0.0021891 0.0450418 0.0247352 0.012789 0.0027370 0.0453387 0.026972 0.0334132 0.0223327 0.0323239 0.0728886 0.0213536 0.02677482 0.0300098 0.03369405 0.0042611 0.0040004 0.00480408 0.0033167 0.0072753 11 0.049499 0.042152 1.0960e-03 28 0.170062 0.162621 0.0074412 0.97557033 0.9991776 insignificant 1.00000 1.00000 insignificant 0.9998601 0.9993305 insignificant 1 1.00000 insignificant -0.01029052 0.55969464 insignificant 1.00000 insignificant 0.049847 0.0774010 -0.0067708 28 0.220068 0.1722955 0.0477722 9.9351e-01 9.9402e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9932e-01 9.9826e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.02691866 4.4024e-01 insignificant 1.0000e+00 insignificant 0.048982 0.0336550 0.01864298 29 0.157763 0.145837 0.0119260 5.6724e-01 9.9955e-01 insignificant 1.0000e+00 1.000000 insignificant 9.4065e-01 0.99993917 insignificant 1.0000000 1.00000 insignificant -0.0123518 0.46981124 insignificant 1.000000 insignificant 0.041926 0.0775616 -0.0096852 28 0.172565 0.1848261 -1.2261e-02 9.9998e-01 9.9576e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.0000e+00 0.9996575 insignificant 1.0000e+00 1.00000 insignificant -0.01662814 6.1716e-01 insignificant 1.0000e+00 insignificant 0.041561 0.0336550 0.01758625 26 0.137331 0.145837 -0.0085063 9.5299e-01 1.0000e+00 insignificant 1.0000e+00 1.0000000 insignificant 9.9367e-01 0.99999993 insignificant 1.0000e+00 1.00000 insignificant -0.0020612 0.88420532 insignificant 1.00000 insignificant 0.0759196 0.0336708 0.0269849 26 0.1548355 0.151914 0.00292161 0.99360372 9.9767e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9995608 1.0000e+00 insignificant 1 1.0000e+00 insignificant 0.0145669 6.5782e-01 insignificant 1.0000e+00 insignificant chr20 30589650 30590650 54246 C20orf112 ENSG00000197183 0.4349206 48 3 0.1398990 65 4 0.186144 90 6 0.140287 79 4 0.085201 51 3 0.378175 93 4 0.213459 82 6 0.244017 68 5 0.1384220 90 6 0.2632448 76 5 0.140085 109 6 0.3187802 76 6 0.142890 113 6 NA 0 0 0.1401671 104 6 0.081145 59 4 0.1037157 99 5 0.287751 49 4 0.2412351 77 6 0.289731 76 3 0.406798 53 5 0.345163 61 4 0.254372 122 6 0.311111 37 4 0.509503 55 3 0.204421 137 6 0.342132 59 4 0.113889 34 2 0.1695297 63 5 0.201917 126 6 0.1605418 131 6 0.3183935 155 6 0.2946025 72 3 0.3291246 61 4 0.1666667 15 1 0.6559343 57 3 0.414983 44 3 0.5445527 78 5 0.617483 76 4 0.1968806 97 5 0.161477 60 4 0.219692 113 4 0.357578 104 4 0.3525523 0.1558004 0.1293168 0.1359190 0.0313924 0.285594 0.1889430 0.273310 0.0933848 0.2302469 0.2591965 0.2040404 0.1703143 NA 0.207995 0.0351307 0.0825834 0.3077580 0.2709747 0.189726 0.2718634 0.222333 0.249179 0.3644781 0.3638287 0.2255005 0.362833 0.1026936 0.2161675 0.225361 0.1370998 0.2944956 0.3305583 0.2607897 NA 0.46354964 0.4465871 0.75838471 0.4074670 0.1866410 0.07163207 0.2256616 0.2080326 1 0.190824 0.260407 -5.9476e-02 6 0.197713 0.257979 -0.0602667 0.97204723 0.0019631 weaklyHypometh 1.00000 0.28045 insignificant 0.9937909 0.0192704 weaklyHypometh 1 1.00000 insignificant -0.06923866 0.10143215 lowCoverage 1.00000 lowCoverage 0.190824 0.4250765 -0.2332407 4 0.197713 0.4375715 -0.2398587 5.1801e-01 1.8418e-13 lowCoverage 1.0000e+00 9.2092e-11 lowCoverage 5.3019e-01 1.4314e-05 lowCoverage 1.0000e+00 0.0087207 lowCoverage -0.19206842 4.4475e-02 lowCoverage 4.2357e-01 lowCoverage 0.190824 0.2844444 -0.05159613 4 0.197713 0.313667 -0.1159542 9.8077e-01 3.1539e-03 lowCoverage 1.0000e+00 0.234828 lowCoverage 9.3961e-01 0.18192109 lowCoverage 1.0000000 1.00000 lowCoverage -0.1017132 0.29771639 lowCoverage 1.000000 lowCoverage 0.260407 0.4250765 -0.1722434 4 0.257979 0.4375715 -1.7959e-01 2.5858e-01 8.8557e-08 lowCoverage 1.0000e+00 4.4279e-05 lowCoverage 3.7705e-01 0.0019856 lowCoverage 1.0000e+00 0.66186 lowCoverage -0.12282976 1.6586e-01 lowCoverage 1.0000e+00 lowCoverage 0.260407 0.2844444 0.01161270 4 0.257979 0.313667 -0.0556875 5.6201e-01 1.5137e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 4.0618e-01 0.69487599 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.0324745 0.73205513 lowCoverage 1.00000 lowCoverage 0.4250765 0.2844444 0.2505713 3 0.4375715 0.313667 0.12390453 0.00017925 4.2569e-01 lowCoverage 0.10847 1.0000e+00 lowCoverage 0.0048726 8.1524e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.0903552 4.3636e-01 lowCoverage 1.0000e+00 lowCoverage chr20 30678950 30679950 54251 ENSG00000204393 0.5931971 131 8 0.4649453 339 10 0.400078 152 10 0.626873 133 6 0.558432 71 4 0.737492 208 8 0.454221 48 5 0.627179 192 8 0.6039092 104 6 0.3863492 77 6 0.566416 316 10 0.5000000 19 0 0.486817 238 6 0.481751 82 6 0.4530021 112 6 0.400000 9 0 0.0000000 2 0 0.494071 190 9 0.5655697 269 8 0.391723 175 8 0.688109 83 6 0.519293 76 6 0.698413 81 7 0.589325 83 6 0.690446 147 8 0.523538 283 11 0.475961 199 10 0.434432 40 4 0.7041368 252 8 0.439028 312 10 0.4448977 304 11 0.5751305 285 8 0.3643568 175 10 0.2863105 113 8 0.1822631 302 10 0.3523810 47 5 0.310814 202 10 0.4340469 336 11 0.440438 109 6 0.5298786 142 10 0.357315 119 8 0.317788 65 7 0.512435 106 8 0.6788165 0.5218891 0.6283179 0.7741553 0.6660694 0.860535 0.4931677 0.703790 0.6691159 0.5323869 0.7358094 0.4790866 0.3498883 0.7140882 0.489046 0.6795074 NA 0.6070230 0.5991904 0.448558 0.8579705 0.560056 0.982057 0.7214509 0.6823776 0.6327828 0.703968 0.7572110 0.7751081 0.621139 0.5807472 0.7865810 0.5058791 0.1922615 0.1600722 0.41568767 0.3836521 0.42423879 0.5602853 0.6178473 0.55667702 0.4431478 0.5822721 3 0.552145 0.614052 -7.7701e-02 8 0.432177 0.433644 -0.0014678 0.98267215 0.0868686 insignificant 1.00000 1.00000 insignificant 0.9768250 0.1160401 insignificant 1 1.00000 insignificant -0.07562451 0.10738956 insignificant 1.00000 insignificant 0.552218 0.2994881 0.2199795 8 0.443805 0.3237585 0.1200467 3.9555e-11 9.9277e-01 hypermethylated 7.7559e-10 1.0000e+00 hypermethylated 5.3307e-06 9.9606e-01 hypermethylated 1.6347e-04 1.0000000 hypermethylated 0.16790590 3.2572e-03 weaklyHypermeth 5.7143e-02 weaklyHypermeth 0.552991 0.4055556 0.07501424 8 0.515097 0.437563 0.0775341 9.8016e-04 7.7810e-01 weaklyHypermeth 3.5006e-02 1.000000 weaklyHypermeth 1.9927e-02 0.89018511 weaklyHypermeth 0.6227251 1.00000 insignificant 0.0580303 0.30205257 insignificant 1.000000 insignificant 0.614125 0.2987234 0.2797341 9 0.455574 0.2896786 1.6590e-01 1.0781e-12 1.0000e+00 hypermethylated 2.9948e-11 1.0000e+00 hypermethylated 8.7152e-08 0.9999821 hypermethylated 3.6313e-06 1.00000 hypermethylated 0.24353041 1.8398e-04 hypermethylated 4.8417e-03 hypermethylated 0.615782 0.4066543 0.14205785 8 0.499283 0.475059 0.0242243 2.6633e-05 9.4391e-01 weaklyHypermeth 1.4796e-03 1.0000000 weaklyHypermeth 6.2602e-04 0.99555544 weaklyHypermeth 5.2168e-02 1.00000 weaklyHypermeth 0.1336548 0.03096372 weaklyHypermeth 1.00000 insignificant 0.2994012 0.4074074 -0.1574340 8 0.3574210 0.508991 -0.15157027 0.91953151 3.2186e-04 weaklyHypometh 1.00000 4.7332e-03 weaklyHypometh 0.9910366 8.6019e-03 weaklyHypometh 1 1.0938e-01 insignificant -0.1098756 7.6209e-02 insignificant 7.1666e-01 insignificant chr20 30701550 30702550 54253 ENSG00000204393 0.7205086 162 7 0.7497967 149 7 0.797233 155 9 0.867361 147 6 0.825517 107 7 0.786129 218 9 0.818724 136 5 0.840467 141 8 0.7787057 124 7 0.8493934 132 7 0.788752 266 9 0.7300320 127 5 0.796906 171 7 0.869048 28 1 0.8317830 136 9 0.660386 110 4 0.7633013 61 4 0.735926 200 7 0.8865981 169 9 0.819342 169 7 0.698810 88 7 0.837474 116 7 0.807568 112 6 0.801901 81 7 0.759259 65 5 0.880783 236 9 0.785389 114 8 0.649832 71 4 0.7137859 160 8 0.872384 291 9 0.7464987 217 9 0.8329967 391 9 0.5707820 124 9 0.5760359 137 7 0.7098214 194 6 0.8266667 78 3 0.734049 95 9 0.8186896 189 9 0.846162 136 7 0.8062290 194 8 0.824662 106 5 0.863053 108 5 0.798523 173 7 0.8934748 0.8301143 0.8415943 0.8624626 0.8686633 0.866521 0.9474010 0.863705 0.8174608 0.9105708 0.8320542 0.8175479 0.7986847 NA 0.869216 0.6524135 0.8334052 0.8054524 0.8629868 0.834178 0.8872942 0.801059 0.810609 0.9209502 0.8970016 0.8474028 0.873722 0.8838261 0.8061226 0.855018 0.8351230 0.9492967 0.5683224 0.8285526 0.7165123 0.62173235 0.8251026 0.67470386 0.7703524 0.7497884 0.89370740 0.7095365 0.8517946 3 0.839752 0.867010 -3.1289e-02 7 0.783783 0.814049 -0.0302653 0.98676939 0.0729724 insignificant 1.00000 1.00000 insignificant 0.9359904 0.3037189 insignificant 1 1.00000 insignificant 0.01357210 0.58092476 insignificant 1.00000 insignificant 0.839752 0.7429621 0.1294140 7 0.783783 0.7145344 0.0692491 4.3368e-07 8.2453e-01 weaklyHypermeth 5.7824e-06 1.0000e+00 weaklyHypermeth 3.5106e-02 7.6306e-01 weaklyHypermeth 2.9014e-01 1.0000000 insignificant 0.08978801 1.1028e-01 insignificant 8.4829e-01 insignificant 0.839752 0.7835196 0.04838133 6 0.783783 0.833532 -0.0497483 6.9401e-02 1.9000e-02 inconclusive 9.5070e-01 0.612908 insignificant 2.7992e-01 0.01002546 inconclusive 1.0000000 0.55697 insignificant -0.0319301 0.09071174 insignificant 1.000000 insignificant 0.867010 0.7429621 0.1457142 9 0.814049 0.7145344 9.9514e-02 4.4614e-05 9.5754e-01 weaklyHypermeth 5.1281e-04 1.0000e+00 weaklyHypermeth 4.7110e-02 0.8997552 weaklyHypermeth 3.5690e-01 1.00000 insignificant 0.07621591 1.7296e-01 insignificant 1.0000e+00 insignificant 0.866117 0.7838215 0.07241860 6 0.740044 0.848665 -0.1086209 5.6706e-02 3.9088e-01 insignificant 7.5608e-01 1.0000000 insignificant 3.9536e-01 0.13148795 insignificant 1.0000e+00 1.00000 insignificant -0.0455022 0.07508665 insignificant 1.00000 insignificant 0.7429621 0.7835196 -0.1052244 6 0.7145344 0.833532 -0.11899737 0.96148171 2.8830e-02 weaklyHypometh 1.00000 2.2177e-01 insignificant 0.9745919 2.7430e-02 weaklyHypometh 1 2.8278e-01 insignificant -0.1217181 4.4818e-02 weaklyHypometh 4.8191e-01 insignificant chr20 30796650 30797650 54258 COMMD7 ENSG00000149600 0.7544834 323 13 0.7640570 317 12 0.735637 263 11 0.726199 263 11 0.774505 151 12 0.788397 445 15 0.779172 209 12 0.767595 173 11 0.7696786 197 10 0.7832316 190 10 0.723853 291 11 0.7133780 111 9 0.909542 154 8 0.676122 68 7 0.8447270 164 9 0.718501 67 7 0.7425677 306 5 0.619227 273 13 0.7641643 136 10 0.653301 309 14 0.868132 95 7 0.889881 44 2 0.801559 197 10 0.839375 152 10 0.769231 51 4 0.755351 311 14 0.767461 121 11 0.699802 82 5 0.7092114 99 8 0.789305 329 14 0.7032810 282 13 0.7610817 556 15 0.7055071 228 11 0.6625000 130 9 0.6052227 293 13 0.6946576 81 4 0.707408 193 10 0.7073326 280 13 0.652917 358 14 0.7695692 341 13 0.757287 248 13 0.725516 147 9 0.661341 320 13 0.7780492 0.8288089 0.7161617 0.8570485 0.8459186 0.841296 0.8409762 0.835700 0.7696047 0.8290381 0.7918834 0.7804317 0.9031578 0.7609039 0.843600 0.7770733 0.8183757 0.7475289 0.8543208 0.868961 0.9244469 0.839600 0.802185 0.8619669 0.8221672 0.8854870 0.785742 0.8010313 0.8462521 0.848391 0.8482642 0.8631916 0.7351718 0.7429525 0.7447272 0.82453641 0.7942873 0.75240409 0.8401105 0.8591028 0.79103390 0.7803587 0.7808470 2 0.796599 0.833765 -1.9808e-02 10 0.650172 0.738543 -0.0883713 0.89867878 0.0446709 weaklyHypometh 1.00000 1.00000 insignificant 0.9603291 0.1556061 insignificant 1 1.00000 insignificant -0.02905560 0.21505530 insignificant 1.00000 insignificant 0.796641 0.7751037 0.0531806 10 0.644626 0.6185936 0.0260322 9.6770e-04 8.3946e-01 weaklyHypermeth 8.2813e-03 1.0000e+00 weaklyHypermeth 3.1144e-02 7.7409e-01 weaklyHypermeth 2.6619e-01 1.0000000 insignificant 0.06997898 6.7513e-03 weaklyHypermeth 1.0716e-01 insignificant 0.796641 0.8123229 -0.01124989 10 0.644626 0.709023 -0.0643973 8.5627e-01 2.7366e-02 weaklyHypometh 1.0000e+00 0.760178 insignificant 7.9357e-01 0.21149982 insignificant 1.0000000 1.00000 insignificant 0.0370911 0.22512342 insignificant 1.000000 insignificant 0.833693 0.7751037 0.0683809 11 0.724018 0.6185936 1.0542e-01 1.8954e-03 9.5441e-01 weaklyHypermeth 1.6773e-02 1.0000e+00 weaklyHypermeth 1.2582e-02 0.9561302 weaklyHypermeth 1.1759e-01 1.00000 insignificant 0.09903458 1.1092e-03 weaklyHypermeth 2.2184e-02 weaklyHypermeth 0.833765 0.8124558 0.00516726 10 0.738543 0.724338 0.0142055 3.4924e-01 1.5060e-01 insignificant 1.0000e+00 1.0000000 insignificant 4.2936e-01 0.82576452 insignificant 1.0000e+00 1.00000 insignificant 0.0661467 0.05608958 insignificant 1.00000 insignificant 0.7751037 0.8123229 -0.0774861 11 0.6185936 0.709023 -0.09042950 0.98077242 6.9369e-03 weaklyHypometh 1.00000 6.3641e-02 weaklyHypometh 0.9452154 1.4739e-01 insignificant 1 1.0000e+00 insignificant -0.0328879 2.9602e-01 insignificant 1.0000e+00 insignificant chr20 30823950 30824950 54260 DNMT3B ENSG00000088305 0.8688312 109 5 0.6688628 104 5 0.979592 39 2 0.895513 168 5 0.500000 2 0 0.834945 84 5 0.787546 80 5 0.911932 36 2 0.7410714 37 2 0.2500000 4 0 0.748352 115 5 0.9200000 19 3 NA 0 0 0.600000 6 0 0.8333333 6 0 0.893750 19 2 0.2666667 7 1 0.775426 65 3 0.8836336 79 2 0.756645 142 5 0.841429 28 4 0.833333 20 3 0.743534 57 5 0.906250 25 1 0.788729 117 2 0.943519 126 5 0.884848 30 2 0.911818 35 3 0.7583333 51 2 0.940711 81 5 0.7555556 57 5 0.8653416 66 5 0.9197549 116 5 1.0000000 30 2 0.7080133 178 5 0.9962963 138 5 0.784091 80 5 1.0000000 63 2 0.950739 187 5 0.9155438 140 5 0.948135 147 5 0.950000 30 2 0.933333 96 5 0.8605806 0.8136234 0.9915966 0.8862237 0.5878658 0.810278 0.8929110 0.899733 0.7016807 0.5878658 0.8758888 0.8823529 NA 0.6131570 NA 0.7500000 0.3438252 0.6943180 0.8481275 0.653915 0.8004202 1.000000 0.676670 0.9264706 0.9842574 0.9539216 0.841711 0.9152406 0.6936275 0.936294 0.8627451 0.8679576 0.8889129 1.0000000 0.9802416 0.99891068 0.7118984 1.00000000 0.9275572 0.9029490 0.89794585 0.9852941 0.9019608 0 0.879572 0.887446 -6.7267e-03 5 0.772060 0.863998 -0.0919375 0.88800548 0.4201444 insignificant 1.00000 1.00000 insignificant 0.9724064 0.2812443 insignificant 1 1.00000 insignificant -0.10483094 0.05479652 lowCoverage 1.00000 lowCoverage 0.878924 0.9289256 -0.0433800 5 0.743568 0.7652589 -0.0216914 9.3470e-01 1.3241e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8620e-01 3.1831e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant -0.15840664 4.0186e-02 lowCoverage 3.9753e-01 lowCoverage 0.884581 0.9333333 -0.06303317 5 0.816484 0.955236 -0.1387516 9.9991e-01 4.3474e-02 weaklyHypometh 1.0000e+00 0.962444 insignificant 9.9934e-01 0.10623354 insignificant 1.0000000 1.00000 insignificant -0.1965976 0.00063314 lowCoverage 0.052762 lowCoverage 0.887283 0.9289256 -0.0375983 5 0.846997 0.7652589 8.1738e-02 9.9835e-01 2.6750e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9326e-01 0.4242337 insignificant 1.0000e+00 1.00000 insignificant -0.05357569 3.6970e-01 lowCoverage 1.0000e+00 lowCoverage 0.892285 0.9333333 -0.05437457 5 0.930331 0.955236 -0.0249052 9.9830e-01 7.9351e-02 insignificant 1.0000e+00 1.0000000 insignificant 9.1240e-01 0.66171069 insignificant 1.0000e+00 1.00000 insignificant -0.0917666 0.00111238 lowCoverage 0.20125 lowCoverage 0.9303483 0.9332220 -0.0175442 5 0.8031530 0.948841 -0.14568785 0.65673525 8.1140e-01 insignificant 1.00000 1.0000e+00 insignificant 0.4743523 9.9212e-01 insignificant 1 1.0000e+00 insignificant -0.0381910 4.9514e-01 lowCoverage 1.0000e+00 lowCoverage chr20 31471250 31472250 54264 CDK5RAP1 ENSG00000101391 0.6721521 161 5 0.6763605 119 6 0.822607 103 5 0.822818 162 5 0.691523 106 6 0.727820 106 7 0.650998 103 3 0.821366 158 7 0.6179029 85 4 0.8657059 100 3 0.803821 270 7 0.7775510 52 3 0.855272 140 4 0.798156 75 3 0.8602317 99 3 0.604806 68 3 0.5007837 52 3 0.730151 130 4 0.8823529 106 6 0.759398 61 4 0.801581 71 4 0.855357 51 3 0.811218 143 5 0.803413 76 4 0.835938 91 5 0.838119 162 7 0.770801 50 5 0.733333 58 4 0.6266711 135 3 0.724813 205 7 0.8238333 199 7 0.6191621 83 6 0.7713530 85 7 0.5818018 90 5 0.7529762 48 4 0.7444444 27 3 0.724710 135 7 0.7538718 180 7 0.606159 170 5 0.8525839 199 7 0.589162 120 5 0.867339 89 3 0.814987 174 5 0.6332657 0.5512779 0.6822538 0.7159016 0.7031496 0.550699 0.7023146 0.739043 0.6765692 0.7672217 0.6901996 0.5617433 0.8222357 0.7186577 0.757215 0.8115135 0.7683588 0.6733095 0.7507478 0.575379 0.7794734 0.775000 0.678488 0.7069275 0.7667816 0.7223749 0.650338 0.7416196 0.6631735 0.748698 0.7342584 0.4975787 0.6630795 0.6430074 0.5744552 0.65913371 0.6301289 0.78721265 0.5475339 0.7204030 0.68264057 0.8387148 0.6615795 3 0.709849 0.782905 -1.5561e-02 7 0.756238 0.779055 -0.0228165 0.72627423 0.1343311 insignificant 1.00000 1.00000 insignificant 0.9545438 0.3579582 insignificant 1 1.00000 insignificant -0.02326440 0.48064106 lowCoverage 1.00000 lowCoverage 0.709220 0.7203540 0.0205038 7 0.672212 0.7054768 -0.0332651 2.3836e-01 7.4648e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.6447e-01 6.9579e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.02556266 4.9970e-01 lowCoverage 1.0000e+00 lowCoverage 0.709406 0.7021277 0.01275288 5 0.693738 0.690988 0.0027500 6.2419e-01 2.4652e-01 insignificant 1.0000e+00 1.000000 insignificant 8.6449e-01 0.27146420 insignificant 1.0000000 1.00000 insignificant 0.0010429 0.98787745 lowCoverage 1.000000 lowCoverage 0.782905 0.7224199 0.0375171 7 0.779055 0.7519947 2.7060e-02 1.6242e-01 8.6825e-01 insignificant 9.0104e-01 1.0000e+00 insignificant 2.1791e-01 0.9437132 insignificant 1.0000e+00 1.00000 insignificant 0.04882706 2.0945e-01 insignificant 1.0000e+00 insignificant 0.783599 0.7030626 0.02683645 5 0.804634 0.789701 0.0149332 2.9178e-01 2.0508e-01 insignificant 1.0000e+00 1.0000000 insignificant 6.1976e-01 0.34199513 insignificant 1.0000e+00 1.00000 insignificant 0.0243073 0.72490366 insignificant 1.00000 insignificant 0.7206406 0.7021277 -0.0147400 5 0.7103281 0.690988 0.01933997 0.85198318 2.5468e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9203329 7.5177e-01 insignificant 1 1.0000e+00 insignificant -0.0245197 7.2982e-01 insignificant 1.0000e+00 insignificant chr20 31869950 31870950 54278 CHMP4B ENSG00000101421 0.6172038 153 5 0.6435633 192 6 0.608844 46 2 0.616901 120 5 0.580877 44 4 0.782831 147 5 0.549289 55 4 0.656421 94 5 0.5413165 34 2 0.5238095 29 2 0.649857 217 7 0.6309524 20 1 0.697421 87 5 0.672222 47 4 0.6309524 68 5 0.500000 11 1 1.0000000 5 1 0.561319 117 3 0.5776724 131 4 0.560404 117 4 0.687500 35 1 0.784615 19 1 0.448980 76 4 0.580071 75 5 0.697577 55 4 0.618210 182 5 0.565217 33 1 0.388889 14 0 0.5147642 114 5 0.589375 191 5 0.7412176 160 6 0.6759916 204 6 0.7397219 103 6 0.3700193 63 4 0.5780952 80 6 0.6000000 12 2 0.596722 86 4 0.6758106 174 5 0.620736 145 5 0.6607916 147 6 0.636588 104 4 0.521187 71 4 0.718885 104 6 0.7010670 0.7264750 0.6600000 0.8130991 0.6667266 0.784673 0.6487557 0.657991 0.6631373 0.7200000 0.7609989 0.6350000 0.7476786 0.7440000 0.675357 NA NA 0.6882935 0.7146900 0.753022 0.7500000 0.839634 0.616883 0.7137778 0.7098246 0.7578281 0.765565 0.5752755 0.7398783 0.804257 0.7689094 0.7095324 0.7175746 0.5898080 0.7018222 0.78509091 0.7391572 0.73598684 0.6685148 0.8058442 0.80938721 0.7002899 0.7209740 0 0.732411 0.779793 -6.4210e-03 5 0.657439 0.557920 0.0995192 0.27986973 0.5073754 insignificant 1.00000 1.00000 insignificant 0.3056647 0.7237950 insignificant 1 1.00000 insignificant 0.02239218 0.59820561 lowCoverage 1.00000 lowCoverage 0.731947 0.7586873 -0.0052689 4 0.614619 0.6218604 -0.0072419 3.6256e-01 2.3269e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 6.4371e-01 5.1613e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 0.03669791 5.3650e-01 lowCoverage 1.0000e+00 lowCoverage 0.731947 0.7232925 -0.01044062 5 0.614619 0.530284 0.0843345 7.2538e-02 1.0718e-01 insignificant 9.6717e-01 1.000000 insignificant 2.7709e-01 0.28285277 insignificant 1.0000000 1.00000 insignificant -0.0015449 0.97033350 lowCoverage 1.000000 lowCoverage 0.780277 0.7586873 0.0028975 4 0.565159 0.6218604 -5.6701e-02 6.5045e-01 2.3751e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 6.7989e-01 0.3125551 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.01430573 8.2072e-01 lowCoverage 1.0000e+00 lowCoverage 0.780277 0.7232925 -0.00275616 6 0.565159 0.530284 0.0348755 4.8426e-01 1.3123e-01 insignificant 1.0000e+00 1.0000000 insignificant 5.0203e-01 0.45628372 insignificant 1.0000e+00 1.00000 insignificant -0.0239371 0.61875728 lowCoverage 1.00000 lowCoverage 0.7586873 0.7232925 -0.0024220 4 0.6218604 0.530284 0.09157638 0.51228377 5.7947e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.5717555 8.2900e-01 lowCoverage 1 1.0000e+00 lowCoverage -0.0382428 5.4424e-01 lowCoverage 1.0000e+00 lowCoverage chr20 32416450 32417450 54296 ITCH ENSG00000078747 0.7901733 355 8 0.7603017 172 9 0.731947 153 8 0.849124 145 7 0.832973 99 8 0.802567 433 9 0.821133 188 8 0.770955 159 8 0.8138748 168 8 0.7515303 176 9 0.844109 301 9 0.7564503 112 8 0.758418 195 9 0.187500 16 2 0.8112369 192 8 0.815529 105 7 0.7724454 81 8 0.751370 161 8 0.7925116 268 9 0.805476 427 8 0.747811 89 6 0.848295 69 6 0.809259 216 8 0.798999 63 6 0.866865 50 5 0.761267 284 9 0.744573 93 7 0.710223 64 7 0.8285233 129 8 0.819384 274 9 0.8359751 281 9 0.8590141 617 8 0.8375903 153 8 0.7971997 144 8 0.8163381 150 7 0.7936275 59 6 0.756814 163 8 0.8566601 261 9 0.877550 290 8 0.8648908 314 8 0.745047 225 8 0.833650 332 8 0.848998 266 8 0.8114008 0.7933063 0.7249611 0.8501072 0.8318348 0.833989 0.8171414 0.815498 0.8228287 0.8281847 0.8458508 0.7785382 0.8204545 NA 0.798222 0.8403500 0.7735958 0.8603829 0.8264345 0.844967 0.7110140 0.849359 0.799291 0.8282759 0.9133333 0.8682882 0.778180 0.8129652 0.8226873 0.804079 0.8372471 0.8486505 0.8569689 0.7779757 0.8222477 0.82279789 0.7896844 0.82966949 0.8702716 0.8597073 0.84595787 0.8206630 0.8540438 6 0.797747 0.835801 -1.4173e-02 8 0.714506 0.745014 -0.0305082 0.94154511 0.0912562 insignificant 1.00000 1.00000 insignificant 0.8574568 0.1639381 insignificant 1 1.00000 insignificant -0.04153446 0.23750464 insignificant 1.00000 insignificant 0.797951 0.8225806 -0.0078020 8 0.793896 0.8199310 -0.0260353 5.5131e-01 9.3394e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 8.1733e-01 6.8366e-02 insignificant 1.0000e+00 1.0000000 insignificant -0.04872380 1.6815e-01 insignificant 1.0000e+00 insignificant 0.797951 0.8051857 -0.03115291 8 0.793896 0.836713 -0.0428170 9.9378e-01 2.5353e-02 weaklyHypometh 1.0000e+00 0.736101 insignificant 9.8893e-01 0.00291196 weaklyHypometh 1.0000000 0.33109 insignificant -0.0730460 0.07661121 insignificant 1.000000 insignificant 0.836176 0.8225806 0.0057426 8 0.827794 0.8199310 7.8627e-03 4.2386e-01 3.3119e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.6888e-01 0.3646403 insignificant 1.0000e+00 1.00000 insignificant -0.00718934 7.3134e-01 insignificant 1.0000e+00 insignificant 0.836176 0.8051857 -0.01587812 8 0.827794 0.836713 -0.0089190 9.2674e-01 5.1948e-02 insignificant 1.0000e+00 1.0000000 insignificant 9.6598e-01 0.05486864 insignificant 1.0000e+00 1.00000 insignificant -0.0315116 0.28984417 insignificant 1.00000 insignificant 0.8225806 0.8051857 -0.0243026 8 0.8199310 0.836713 -0.01678168 0.88446195 3.1902e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9166099 6.2338e-01 insignificant 1 1.0000e+00 insignificant -0.0243222 4.0689e-01 insignificant 1.0000e+00 insignificant chr20 33185350 33186350 54314 ENSG00000201151 0.9859944 145 6 0.9561590 191 7 0.910773 125 7 0.991429 66 2 0.980392 77 4 0.965704 189 5 0.977146 139 4 0.943956 90 7 0.9721088 84 7 0.9603668 96 6 0.960440 187 7 0.6086770 67 4 0.960718 135 7 0.958333 13 1 0.9606443 111 6 0.987179 45 4 0.9545455 42 4 0.941880 78 2 0.9748236 161 6 0.927893 189 7 0.865353 106 7 1.000000 4 0 0.982195 132 6 0.963265 80 5 1.000000 4 0 0.946918 150 7 0.967013 77 7 0.906593 61 4 0.8986140 113 6 0.979039 152 6 0.9605502 148 6 0.9578906 302 7 1.0000000 119 7 0.9641646 113 5 0.7551316 168 7 1.0000000 4 0 0.836395 96 6 0.8964971 175 7 0.921109 152 2 0.9962406 152 6 0.783333 77 1 0.991379 66 1 0.996552 66 1 0.9255398 0.8580605 0.8402829 0.9544304 0.9106478 0.950579 0.9385745 0.964492 0.9264014 0.9194905 0.9156767 0.9070297 0.8966861 NA 0.951526 0.9941577 0.9852237 0.9629990 0.9523178 0.954836 0.8141784 0.936124 0.950908 0.8047016 NA 0.9324950 0.961450 0.9819864 0.9426149 0.956915 0.9281244 0.9334865 1.0000000 0.9588500 0.9522556 0.99777242 0.8119349 0.91624666 0.9223503 0.9800133 0.93670886 0.9607158 0.9837407 1 0.938986 0.938299 1.3971e-04 7 0.951312 0.949820 0.0014919 0.58742340 0.7573743 insignificant 1.00000 1.00000 insignificant 0.7426409 0.5487266 insignificant 1 1.00000 insignificant -0.00832778 0.70552798 insignificant 1.00000 insignificant 0.938986 0.8814815 0.0508597 7 0.951312 0.8646215 0.0866905 8.1668e-04 7.9856e-01 weaklyHypermeth 7.1015e-03 1.0000e+00 weaklyHypermeth 4.1792e-01 1.9777e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.03526012 4.5077e-01 insignificant 1.0000e+00 insignificant 0.938986 0.9551657 -0.02713756 1 0.951312 0.960554 -0.0092418 7.9039e-01 2.4405e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 9.9700e-01 0.05799848 lowCoverage 1.0000000 1.00000 lowCoverage 0.0062354 0.89458484 lowCoverage 1.000000 lowCoverage 0.938299 0.8814815 0.0510886 7 0.949820 0.8646215 8.5199e-02 2.2133e-02 7.2346e-01 weaklyHypermeth 1.5370e-01 1.0000e+00 insignificant 6.7279e-01 0.4746867 insignificant 1.0000e+00 1.00000 insignificant 0.04358790 3.4052e-01 insignificant 1.0000e+00 insignificant 0.938299 0.9551657 -0.02364926 1 0.949820 0.960554 -0.0107336 9.1955e-01 1.9407e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 9.9191e-01 0.13478012 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.0145631 0.74879382 lowCoverage 1.00000 lowCoverage 0.8814815 0.9551657 -0.0503701 1 0.8646215 0.960554 -0.09593229 0.99945826 8.2028e-02 lowCoverage 1.00000 5.2921e-01 lowCoverage 0.9407181 2.8856e-01 lowCoverage 1 1.0000e+00 lowCoverage -0.0290248 6.2663e-01 lowCoverage 1.0000e+00 lowCoverage chr20 34143250 34144250 54347 EPB41L1 ENSG00000088367 0.0586439 1283 51 0.0410226 1572 51 0.032652 1923 57 0.037368 784 33 0.020661 1174 54 0.051465 1803 58 0.054003 1785 52 0.075096 1478 52 0.0103806 2116 52 0.0174674 1964 52 0.046209 1640 52 0.0099989 1975 52 0.055277 1680 52 0.000000 372 20 0.0109310 2075 52 0.024292 1566 52 0.0275518 1592 42 0.056510 1136 56 0.0050982 1208 52 0.130932 1432 59 0.035452 667 46 0.024459 854 47 0.062042 1618 57 0.040912 705 51 0.047981 779 31 0.019922 1981 57 0.043523 1214 53 0.048935 735 48 0.0264676 1157 52 0.071940 1927 57 0.0254830 1720 57 0.0652150 2887 58 0.0221701 1232 57 0.0226971 1159 52 0.0817793 621 31 0.0196078 440 32 0.031392 497 42 0.0562962 1571 57 0.030737 1733 52 0.0198481 1714 52 0.017555 1095 42 0.013084 1457 43 0.074024 1553 51 0.0037479 0.0063425 0.0159193 0.0063908 0.0017168 0.014540 0.0033710 0.013009 0.0092830 0.0081801 0.0140320 0.0096151 0.0096505 0.0039346 0.010872 0.0063101 0.0092297 0.0104281 0.0057047 0.026150 0.0095893 0.007089 0.013045 0.0164939 0.0040953 0.0060152 0.012040 0.0215731 0.0139561 0.019357 0.0050899 0.0081735 0.0156191 0.0148558 0.0900997 0.00030067 0.0130531 0.00839215 0.0103287 0.0026061 0.00054889 0.0112729 0.0090074 24 0.013973 0.019823 -6.7839e-05 52 0.080304 0.057140 0.0231645 0.25810586 0.8424141 insignificant 1.00000 1.00000 insignificant 0.4026268 0.9625053 insignificant 1 1.00000 insignificant -0.00441634 0.60325995 insignificant 1.00000 insignificant 0.013973 0.0175725 0.0016819 52 0.080304 0.0471763 0.0331281 1.4170e-01 9.8177e-01 insignificant 8.1905e-01 1.0000e+00 insignificant 3.9338e-01 9.9991e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.00071233 9.5473e-01 insignificant 1.0000e+00 insignificant 0.013787 0.0074153 0.00340345 51 0.065712 0.052585 0.0131278 5.0630e-02 9.9964e-01 insignificant 7.7251e-01 1.000000 insignificant 2.0079e-01 0.99999922 insignificant 1.0000000 1.00000 insignificant 0.0072283 0.59563674 insignificant 1.000000 insignificant 0.019823 0.0175725 0.0017775 57 0.057140 0.0471763 9.9636e-03 4.9506e-01 9.9624e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.2061e-01 0.9999831 insignificant 1.0000e+00 1.00000 insignificant 0.00370401 7.5283e-01 insignificant 1.0000e+00 insignificant 0.019503 0.0074153 0.00383218 51 0.050381 0.052585 -0.0022032 7.2456e-02 9.9999e-01 insignificant 9.3471e-01 1.0000000 insignificant 3.8301e-01 0.99999482 insignificant 1.0000e+00 1.00000 insignificant 0.0116446 0.37839344 insignificant 1.00000 insignificant 0.0174324 0.0074153 0.0033354 51 0.0456770 0.052585 -0.00690762 0.73835162 9.9999e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9996458 1.0000e+00 insignificant 1 1.0000e+00 insignificant 0.0079406 6.1188e-01 insignificant 1.0000e+00 insignificant chr20 34897150 34898150 54368 DSN1 ENSG00000149636 0.0121951 209 8 0.0083333 184 8 0.210366 209 8 0.072685 233 8 0.000000 52 4 0.159919 267 8 0.016540 180 8 0.204545 99 5 0.0714286 173 8 0.0018762 134 8 0.078497 182 9 0.1652578 142 8 0.146154 146 8 0.000000 17 1 0.0070547 196 8 0.000000 90 8 0.0206044 271 8 0.123851 241 8 0.0096750 133 8 0.264770 229 10 0.135417 65 7 0.016341 258 8 0.083333 191 8 0.194056 69 7 0.092154 364 8 0.012346 153 8 0.230516 138 8 0.066837 55 5 0.0935829 100 4 0.039872 211 8 0.0673309 166 8 0.1274817 304 8 0.0824176 108 4 0.0000000 113 8 0.0000000 73 4 0.0059524 118 5 0.055556 37 4 0.2884615 160 8 0.000000 322 8 0.0040004 244 8 0.050000 185 8 0.107485 263 8 0.030909 263 8 0.0230097 0.0121855 0.0035665 0.0210888 0.0000000 0.018620 0.0210484 0.018868 0.0000000 0.0057524 0.0175993 0.0113000 0.0037736 NA 0.012329 0.0000000 0.0178571 0.0178635 0.0085868 0.050813 0.0471698 0.012317 0.000000 0.0154374 0.0032308 0.0349406 0.070091 0.0699461 0.0069367 0.024826 0.0098954 0.0162655 0.0390836 0.0000000 0.0021563 0.00359389 0.0019766 0.00628931 0.0000000 0.0029196 0.00000000 0.0407384 0.0558491 4 0.025111 0.029894 -5.9798e-03 8 0.102343 0.095740 0.0066033 0.44418092 0.8474139 insignificant 1.00000 1.00000 insignificant 0.5304646 0.8685640 insignificant 1 1.00000 insignificant -0.01791804 0.51421350 insignificant 1.00000 insignificant 0.025111 0.0213465 0.0065215 8 0.102343 0.0949999 0.0073433 3.6674e-01 8.5569e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.9072e-01 9.6587e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.00662310 8.9702e-01 insignificant 1.0000e+00 insignificant 0.025118 0.0172279 0.00078487 8 0.110216 0.059536 0.0506801 4.4134e-01 5.9278e-01 insignificant 1.0000e+00 1.000000 insignificant 6.9537e-01 0.76078981 insignificant 1.0000000 1.00000 insignificant 0.0402086 0.16555933 insignificant 1.000000 insignificant 0.029894 0.0213465 0.0120995 8 0.095740 0.0949999 7.3991e-04 5.5256e-01 2.8735e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.8089e-01 0.7685739 insignificant 1.0000e+00 1.00000 insignificant 0.02454114 6.3444e-01 insignificant 1.0000e+00 insignificant 0.029966 0.0172279 0.00776335 8 0.103104 0.059536 0.0435688 7.3888e-01 2.2543e-01 insignificant 1.0000e+00 1.0000000 insignificant 7.8794e-01 0.54796216 insignificant 1.0000e+00 1.00000 insignificant 0.0581267 0.05606298 insignificant 1.00000 insignificant 0.0213816 0.0172279 -0.0064286 8 0.1023076 0.059536 0.04277195 0.74449817 6.2940e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9689851 8.1039e-01 insignificant 1 1.0000e+00 insignificant 0.0335855 5.1980e-01 insignificant 1.0000e+00 insignificant chr20 34897450 34898450 54369 DSN1 ENSG00000149636 0.0121951 209 8 0.0083333 184 8 0.210366 209 8 0.072685 233 8 0.000000 52 4 0.159919 267 8 0.016540 180 8 0.204545 99 5 0.0714286 173 8 0.0018762 134 8 0.078497 182 9 0.1652578 142 8 0.146154 146 8 0.000000 17 1 0.0070547 196 8 0.000000 90 8 0.0206044 271 8 0.123851 241 8 0.0096750 133 8 0.264770 229 10 0.135417 65 7 0.016341 258 8 0.083333 191 8 0.194056 69 7 0.092154 364 8 0.012346 153 8 0.230516 138 8 0.066837 55 5 0.0935829 100 4 0.039872 211 8 0.0673309 166 8 0.1274817 304 8 0.0824176 108 4 0.0000000 113 8 0.0000000 73 4 0.0059524 118 5 0.055556 37 4 0.2884615 160 8 0.000000 322 8 0.0040004 244 8 0.050000 185 8 0.107485 263 8 0.030909 263 8 0.0230097 0.0121855 0.0035665 0.0210888 0.0000000 0.018620 0.0210484 0.018868 0.0000000 0.0057524 0.0175993 0.0113000 0.0037736 NA 0.012329 0.0000000 0.0178571 0.0178635 0.0085868 0.050813 0.0471698 0.012317 0.000000 0.0154374 0.0032308 0.0349406 0.070091 0.0699461 0.0069367 0.024826 0.0098954 0.0162655 0.0390836 0.0000000 0.0021563 0.00359389 0.0019766 0.00628931 0.0000000 0.0029196 0.00000000 0.0407384 0.0558491 4 0.025111 0.029894 -5.9798e-03 8 0.102343 0.095740 0.0066033 0.44418092 0.8474139 insignificant 1.00000 1.00000 insignificant 0.5304646 0.8685640 insignificant 1 1.00000 insignificant -0.01791804 0.51421350 insignificant 1.00000 insignificant 0.025111 0.0213465 0.0065215 8 0.102343 0.0949999 0.0073433 3.6674e-01 8.5569e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.9072e-01 9.6587e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.00662310 8.9702e-01 insignificant 1.0000e+00 insignificant 0.025118 0.0172279 0.00078487 8 0.110216 0.059536 0.0506801 4.4134e-01 5.9278e-01 insignificant 1.0000e+00 1.000000 insignificant 6.9537e-01 0.76078981 insignificant 1.0000000 1.00000 insignificant 0.0402086 0.16555933 insignificant 1.000000 insignificant 0.029894 0.0213465 0.0120995 8 0.095740 0.0949999 7.3991e-04 5.5256e-01 2.8735e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.8089e-01 0.7685739 insignificant 1.0000e+00 1.00000 insignificant 0.02454114 6.3444e-01 insignificant 1.0000e+00 insignificant 0.029966 0.0172279 0.00776335 8 0.103104 0.059536 0.0435688 7.3888e-01 2.2543e-01 insignificant 1.0000e+00 1.0000000 insignificant 7.8794e-01 0.54796216 insignificant 1.0000e+00 1.00000 insignificant 0.0581267 0.05606298 insignificant 1.00000 insignificant 0.0213816 0.0172279 -0.0064286 8 0.1023076 0.059536 0.04277195 0.74449817 6.2940e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9689851 8.1039e-01 insignificant 1 1.0000e+00 insignificant 0.0335855 5.1980e-01 insignificant 1.0000e+00 insignificant chr20 35397350 35398350 54383 MANBAL ENSG00000101363 0.9526829 103 5 0.8033602 104 5 0.784615 40 2 0.901304 112 2 0.808608 29 2 0.970181 104 3 0.697857 29 4 0.688725 43 2 0.6250000 6 0 0.8000000 8 1 0.925784 209 5 1.0000000 9 0 1.000000 10 1 0.656250 12 1 1.0000000 6 0 NA 0 0 0.0000000 25 1 0.407051 60 1 0.9230769 16 1 0.661836 73 1 0.900000 17 1 NA 0 0 0.788889 43 2 0.821667 43 4 0.587500 21 3 0.957476 159 5 0.833333 12 0 1.000000 4 0 0.9238095 25 2 0.920250 153 5 0.9598068 140 5 0.9777778 109 3 0.5990196 49 2 0.2888889 17 1 0.4125000 80 3 0.5000000 9 1 0.675227 57 3 0.5582353 129 5 0.893333 106 3 0.8533133 139 5 0.862222 110 4 0.708333 12 1 0.886316 136 5 0.9634146 0.8709677 1.0000000 0.9565217 0.8571429 0.975904 0.7142857 0.500000 0.5000000 1.0000000 0.9367089 1.0000000 1.0000000 1.0000000 1.000000 NA NA 0.9423077 0.8461538 0.985507 1.0000000 NA 1.000000 0.8750000 1.0000000 0.9600000 1.000000 NA 0.7857143 0.938462 0.9193548 0.9111111 0.9117647 0.4444444 1.0000000 1.00000000 0.8125000 0.88888889 1.0000000 0.8915663 0.97777778 1.0000000 1.0000000 0 0.879639 0.910468 -3.4797e-02 4 0.706161 0.762113 -0.0559528 0.98290603 0.0788507 lowCoverage 1.00000 1.00000 lowCoverage 0.9896646 0.2573056 lowCoverage 1 1.00000 lowCoverage -0.11038289 0.10887524 lowCoverage 1.00000 lowCoverage 0.882294 0.6715543 0.1915933 4 0.847393 0.5341654 0.3132272 5.4836e-15 9.7821e-01 lowCoverage 1.5232e-13 1.0000e+00 lowCoverage 1.2021e-04 9.9456e-01 lowCoverage 2.2680e-03 1.0000000 lowCoverage 0.26310916 4.6785e-03 lowCoverage 7.9296e-02 lowCoverage 0.879639 0.9383698 -0.03712275 4 0.706161 0.737891 -0.0317309 8.3315e-01 3.7881e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 8.7867e-01 0.57301396 lowCoverage 1.0000000 1.00000 lowCoverage -0.0719493 0.28584696 lowCoverage 1.000000 lowCoverage 0.911724 0.6715543 0.2468965 4 0.914536 0.5341654 3.8037e-01 2.0919e-13 9.9980e-01 lowCoverage 5.9768e-12 1.0000e+00 lowCoverage 7.9968e-06 0.9953899 lowCoverage 2.6656e-04 1.00000 lowCoverage 0.37349204 3.3329e-04 lowCoverage 8.3322e-03 lowCoverage 0.910468 0.9383698 0.00286833 5 0.762113 0.737891 0.0242219 4.2325e-01 7.9523e-01 insignificant 1.0000e+00 1.0000000 insignificant 4.4133e-01 0.94080914 insignificant 1.0000e+00 1.00000 insignificant 0.0384336 0.44987211 lowCoverage 1.00000 lowCoverage 0.6715543 0.9402390 -0.2481064 4 0.5341654 0.885470 -0.35130429 0.99962247 2.5584e-07 lowCoverage 1.00000 6.5324e-06 lowCoverage 0.9990767 1.3149e-03 lowCoverage 1 2.7976e-02 lowCoverage -0.3350584 9.6744e-04 lowCoverage 3.1074e-02 lowCoverage chr20 36187550 36188550 54399 ENSG00000210342,ENSG00000222993 0.8724295 256 6 0.8414876 208 6 0.846534 179 6 0.908228 260 4 0.942452 177 6 0.928617 407 5 0.909956 219 6 0.933389 212 5 0.8915776 191 5 0.9294701 175 5 0.867868 201 6 0.9097672 143 6 0.889545 222 5 0.968254 33 3 0.9007635 193 6 0.914489 122 5 0.8707140 113 5 0.813699 271 4 0.8885271 163 6 0.938084 235 4 0.867778 49 4 0.866110 108 3 0.878679 151 4 0.817308 70 4 0.853179 145 4 0.940416 232 5 0.815215 98 6 0.917114 80 6 0.9319471 192 5 0.889161 269 6 0.9012730 249 5 0.8562569 269 5 0.8049078 234 6 0.7841357 150 6 0.6517857 57 1 0.8819876 120 4 0.882674 147 6 0.9374135 277 6 0.927656 376 4 0.9153235 274 5 0.900234 231 4 0.884117 220 4 0.776183 281 4 0.8552678 0.7801672 0.7688562 0.8795221 0.9041054 0.894494 0.8571372 0.855094 0.8060838 0.9027819 0.8010031 0.8590404 0.8619125 0.9333341 0.849179 0.8304253 0.7840551 0.7506860 0.8113176 0.896072 0.8318499 0.859915 0.818197 0.8634762 0.7890337 0.8743239 0.797349 0.9343559 0.8519101 0.875354 0.8947791 0.9070608 0.6129615 0.7669537 0.6881544 0.83402873 0.7461119 0.92957147 0.8727435 0.8376877 0.83891086 0.8661589 0.8887335 3 0.864070 0.877615 -2.0926e-02 5 0.894828 0.890701 0.0041266 0.37497361 0.1923999 insignificant 1.00000 1.00000 insignificant 0.6757228 0.1192239 insignificant 1 1.00000 insignificant 0.02042276 0.17185244 lowCoverage 1.00000 lowCoverage 0.864070 0.8071066 0.0633531 6 0.894828 0.8491838 0.0456439 3.1626e-03 1.8923e-01 weaklyHypermeth 2.4142e-02 1.0000e+00 weaklyHypermeth 2.4503e-01 5.5326e-02 insignificant 1.0000e+00 1.0000000 insignificant 0.07447515 1.3331e-01 lowCoverage 9.9486e-01 lowCoverage 0.864070 0.8675832 -0.01671352 4 0.894828 0.893262 0.0015660 7.1130e-01 1.4206e-02 lowCoverage 1.0000e+00 0.510646 lowCoverage 7.0476e-01 0.00897765 lowCoverage 1.0000000 0.55697 lowCoverage 0.0175898 0.56436883 lowCoverage 1.000000 lowCoverage 0.877615 0.8071066 0.0797135 5 0.890701 0.8491838 4.1517e-02 3.1193e-02 4.2580e-01 weaklyHypermeth 2.0921e-01 1.0000e+00 insignificant 3.5343e-01 0.2719661 insignificant 1.0000e+00 1.00000 insignificant 0.05405239 2.5649e-01 lowCoverage 1.0000e+00 lowCoverage 0.877615 0.8675832 0.00831976 4 0.890701 0.893262 -0.0025606 1.7368e-01 3.6226e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 3.3056e-01 0.30240149 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.0028330 0.92694721 lowCoverage 1.00000 lowCoverage 0.8071066 0.8675832 -0.0755394 4 0.8491838 0.893262 -0.04407790 0.41805613 1.2421e-01 lowCoverage 1.00000 7.4823e-01 lowCoverage 0.5869433 3.7163e-01 lowCoverage 1 1.0000e+00 lowCoverage -0.0568854 2.8203e-01 lowCoverage 1.0000e+00 lowCoverage chr20 36205450 36206450 54403 ENSG00000210342,ENSG00000222993 0.7771793 177 5 0.7042095 166 5 0.780363 158 5 0.853782 95 3 0.687830 59 5 0.818120 180 5 0.870519 146 5 0.701527 127 5 0.7944051 120 5 0.7805446 120 5 0.871929 133 5 0.7739652 100 5 0.796390 125 5 NA 0 0 0.7913871 120 5 0.706842 62 5 0.8607287 70 5 0.447727 125 4 0.7973039 105 5 0.847031 160 5 0.914932 65 5 0.648148 68 3 0.840910 155 5 0.782152 84 5 0.727273 30 3 0.761134 143 5 0.828676 76 5 0.681186 68 5 0.7948228 123 5 0.807048 184 5 0.8411348 150 5 0.9045126 227 5 0.5525762 127 5 0.5201087 98 5 0.6250000 25 2 0.4285714 40 3 0.661324 76 5 0.4220504 183 5 0.781887 178 5 0.6794897 180 5 0.771857 113 4 0.615745 118 5 0.638233 107 3 0.7784917 0.6899806 0.7644602 0.8560869 0.7062187 0.823482 0.8558226 0.763027 0.7834191 0.7406669 0.8591838 0.7037436 0.8040301 NA 0.777405 0.7828603 0.8138500 0.4368600 0.7866813 0.843552 0.9080335 0.562439 0.808929 0.7440951 0.7076392 0.7751716 0.887223 0.6940587 0.8073423 0.839981 0.8419114 0.8744360 0.7894582 0.7087364 0.8009446 0.56170531 0.8566061 0.53195210 0.7451061 0.5940773 0.69068307 0.6140360 0.7084938 3 0.767036 0.810634 -4.5812e-02 5 0.779668 0.812559 -0.0328915 0.92030879 0.0228869 weaklyHypometh 1.00000 0.90156 insignificant 0.8741915 0.0882447 insignificant 1 1.00000 insignificant -0.02265466 0.48967042 lowCoverage 1.00000 lowCoverage 0.767036 0.6302368 0.1389770 5 0.779668 0.5115785 0.2680892 1.3784e-18 1.1750e-04 weaklyHypermeth 4.9228e-17 1.3055e-02 weaklyHypermeth 1.2542e-04 2.3041e-04 weaklyHypermeth 2.3227e-03 0.0576018 weaklyHypermeth 0.23673448 7.8097e-04 lowCoverage 1.6616e-02 lowCoverage 0.767036 0.6839080 0.06946680 5 0.779668 0.718838 0.0608296 3.6762e-02 9.3253e-01 weaklyHypermeth 6.1269e-01 1.000000 insignificant 1.8084e-02 0.90838751 weaklyHypermeth 0.5833456 1.00000 insignificant 0.0742306 0.10632233 lowCoverage 1.000000 lowCoverage 0.810634 0.6302368 0.1792713 5 0.812559 0.5115785 3.0098e-01 9.6522e-14 1.9649e-01 weaklyHypermeth 2.9249e-12 1.0000e+00 weaklyHypermeth 5.2938e-04 0.0319440 weaklyHypermeth 8.2715e-03 1.00000 weaklyHypermeth 0.25938914 4.2625e-04 lowCoverage 9.4529e-03 lowCoverage 0.810634 0.6839080 0.11822037 5 0.812559 0.718838 0.0937210 1.2234e-03 9.8562e-01 weaklyHypermeth 3.1370e-02 1.0000000 weaklyHypermeth 7.9770e-03 0.92356264 weaklyHypermeth 2.4173e-01 1.00000 insignificant 0.0968853 0.04692004 lowCoverage 1.00000 lowCoverage 0.6302368 0.6839080 -0.0303564 5 0.5115785 0.718838 -0.20725962 0.00322045 8.0515e-07 weaklyHypometh 0.26837 1.9170e-05 weaklyHypometh 0.0099229 3.7160e-02 weaklyHypometh 1 3.4092e-01 insignificant -0.1625039 1.3156e-02 lowCoverage 2.1719e-01 lowCoverage chr20 36213750 36214750 54404 ENSG00000210342,ENSG00000222993 0.6874218 392 10 0.6634478 301 11 0.689779 223 11 0.769266 310 10 0.786702 176 11 0.888838 414 11 0.881609 179 10 0.814546 184 11 0.8142357 221 12 0.8139292 188 8 0.834023 458 13 0.8915194 144 9 0.720752 249 8 0.826190 74 5 0.6978074 209 9 0.761760 120 9 0.6969808 98 7 0.403578 343 10 0.8040468 176 10 0.775980 307 11 0.623193 119 8 0.848483 101 5 0.856739 195 13 0.922070 89 8 0.662800 101 5 0.746658 356 13 0.625961 162 9 0.640927 88 8 0.8203404 173 10 0.832668 362 12 0.8273119 349 13 0.8323113 426 12 0.2838274 288 12 0.5464898 240 10 0.1491851 164 4 0.1156968 99 7 0.441355 204 8 0.2352770 357 11 0.725165 409 10 0.6687637 400 11 0.746943 362 10 0.648182 251 9 0.677363 396 10 0.8396252 0.6495643 0.7900663 0.8671687 0.8572331 0.857529 0.8476488 0.815212 0.8018079 0.8629741 0.8835796 0.8466331 0.7234278 0.7896725 0.751858 0.8102447 0.8107013 0.4062058 0.8329005 0.817047 0.7871185 0.626569 0.852569 0.9192684 0.7188625 0.7598592 0.750879 0.8382574 0.8252105 0.842896 0.8290908 0.8663617 0.2252276 0.4503306 0.3461664 0.21358649 0.5217803 0.16210792 0.6857508 0.7016923 0.75039778 0.6701966 0.6225162 5 0.776029 0.792543 -2.0567e-02 11 0.739879 0.734063 0.0058159 0.96105458 0.3820048 insignificant 1.00000 1.00000 insignificant 0.9670054 0.1632027 insignificant 1 1.00000 insignificant -0.00883461 0.82238684 insignificant 1.00000 insignificant 0.776029 0.2603550 0.4774611 10 0.739879 0.3142783 0.4256011 1.2707e-50 1.0000e+00 hypermethylated 1.2707e-48 1.0000e+00 hypermethylated 9.3213e-21 1.0000e+00 hypermethylated 1.5535e-18 1.0000000 hypermethylated 0.46581545 5.6680e-04 hypermethylated 1.2596e-02 hypermethylated 0.775934 0.6122112 0.11973842 9 0.721299 0.717336 0.0039635 3.8896e-06 9.3709e-01 weaklyHypermeth 2.7783e-04 1.000000 weaklyHypermeth 1.3234e-05 0.92592308 weaklyHypermeth 0.0044114 1.00000 weaklyHypermeth 0.0678372 0.03927824 weaklyHypermeth 0.770162 insignificant 0.792543 0.2603550 0.4993409 10 0.734063 0.3142783 4.1979e-01 5.8858e-44 1.0000e+00 hypermethylated 5.8858e-42 1.0000e+00 hypermethylated 1.9395e-16 1.0000000 hypermethylated 2.7707e-14 1.00000 hypermethylated 0.47465007 3.9404e-04 hypermethylated 9.1637e-03 hypermethylated 0.792925 0.6122112 0.15070691 9 0.743639 0.717336 0.0263036 3.9691e-08 9.8779e-01 weaklyHypermeth 9.9227e-06 1.0000000 weaklyHypermeth 2.8150e-04 0.94355177 weaklyHypermeth 3.1278e-02 1.00000 weaklyHypermeth 0.0766719 0.04730643 weaklyHypermeth 1.00000 insignificant 0.2601927 0.6122112 -0.2814630 9 0.3129172 0.717336 -0.40441861 1.00000000 8.8302e-17 hypomethylated 1.00000 5.1942e-15 hypomethylated 1.0000000 7.9127e-09 hypomethylated 1 7.4022e-07 hypomethylated -0.3979782 1.6431e-03 weaklyHypometh 4.4407e-02 weaklyHypometh chr20 36690250 36691250 54419 ENSG00000213959 0.7580129 366 11 0.7588366 198 11 0.678647 148 11 0.812787 228 11 0.731818 77 8 0.758450 346 11 0.627633 133 11 0.789668 166 10 0.5610039 120 7 0.7323675 163 11 0.789491 370 11 0.8831585 93 7 0.737418 277 11 0.921429 26 2 0.7961637 175 11 0.732071 71 6 0.8382920 104 7 0.852747 265 11 0.7424198 187 8 0.783484 306 11 0.753526 88 6 0.842693 128 8 0.694163 262 11 0.748814 71 7 0.834416 63 8 0.724842 250 11 0.633255 136 8 0.887635 86 6 0.6954809 178 10 0.756502 217 11 0.7773077 252 11 0.7946492 390 11 0.6501063 218 10 0.6594435 249 11 0.7376737 205 11 0.7318482 137 7 0.692808 142 9 0.7630752 176 11 0.724619 328 11 0.8209193 322 11 0.760298 269 11 0.801920 363 11 0.765255 290 11 0.7910590 0.7829265 0.7641640 0.8399125 0.7640177 0.755151 0.7113368 0.827651 0.7048495 0.8044602 0.8069889 0.8721557 0.8073678 0.8391702 0.824269 0.7496087 0.8691351 0.8626165 0.7832155 0.765516 0.7767575 0.869158 0.768057 0.7092336 0.8541470 0.8156486 0.732404 0.8419705 0.8028684 0.792570 0.8294358 0.8076268 0.6878100 0.6934765 0.7187916 0.80847193 0.7233135 0.77932221 0.7603394 0.8488543 0.79537485 0.8265465 0.8000128 5 0.788164 0.777935 1.3763e-02 11 0.758191 0.731230 0.0269608 0.07353295 0.9244639 insignificant 1.00000 1.00000 insignificant 0.4906330 0.8794817 insignificant 1 1.00000 insignificant 0.00235477 0.93276857 insignificant 1.00000 insignificant 0.788164 0.7364685 0.0539308 11 0.758191 0.7409544 0.0172367 7.3658e-06 7.5441e-01 weaklyHypermeth 8.6656e-05 1.0000e+00 weaklyHypermeth 1.8474e-03 8.5735e-01 weaklyHypermeth 2.2807e-02 1.0000000 weaklyHypermeth 0.05846910 4.0548e-02 weaklyHypermeth 3.9753e-01 insignificant 0.788906 0.7881679 -0.00916426 11 0.772572 0.777735 -0.0051628 8.3474e-01 4.3846e-01 insignificant 1.0000e+00 1.000000 insignificant 8.0238e-01 0.63961924 insignificant 1.0000000 1.00000 insignificant -0.0103074 0.68561922 insignificant 1.000000 insignificant 0.777935 0.7364685 0.0418959 11 0.731230 0.7409544 -9.7241e-03 2.1160e-03 6.9925e-01 weaklyHypermeth 1.8085e-02 1.0000e+00 weaklyHypermeth 9.5733e-03 0.9785469 weaklyHypermeth 9.3856e-02 1.00000 weaklyHypermeth 0.05611432 6.1935e-02 insignificant 5.5299e-01 insignificant 0.778987 0.7881679 -0.02067292 11 0.752251 0.777735 -0.0254837 9.3527e-01 8.4614e-02 insignificant 1.0000e+00 1.0000000 insignificant 7.7034e-01 0.47945796 insignificant 1.0000e+00 1.00000 insignificant -0.0126622 0.64189349 insignificant 1.00000 insignificant 0.7360000 0.7881679 -0.0603975 11 0.7174048 0.777735 -0.06033007 0.90857501 1.0517e-03 weaklyHypometh 1.00000 1.2984e-02 weaklyHypometh 0.9327847 3.9985e-03 weaklyHypometh 1 6.4439e-02 weaklyHypometh -0.0687765 2.2893e-02 weaklyHypometh 3.1208e-01 insignificant chr20 37017950 37018950 54435 FAM83D ENSG00000101447 0.7395934 199 6 0.6970513 116 5 0.641765 72 5 0.779414 112 6 0.821818 48 5 0.739211 228 6 0.722727 66 5 0.623990 72 5 0.6200000 53 5 0.6483333 73 5 0.708368 97 5 0.6428571 31 5 0.693140 92 5 NA 0 0 0.6932580 107 5 0.676970 39 5 0.6031959 305 6 0.697901 122 6 0.7329935 131 6 0.769909 166 6 0.600000 13 0 0.675458 61 5 0.663832 117 6 0.785000 25 2 0.737143 33 5 0.682112 139 6 0.739286 47 5 0.844444 35 4 0.6791919 56 5 0.654191 160 6 0.6634106 136 6 0.6493704 209 6 0.6584416 75 5 0.6000246 82 5 0.6098608 133 6 0.7596755 61 5 0.710659 48 5 0.5997209 172 6 0.721040 192 6 0.7326019 206 6 0.692795 159 6 0.779957 157 6 0.651873 245 6 0.8090184 0.7204763 0.6636675 0.8333754 0.8387227 0.808487 0.7481660 0.642781 0.6373993 0.6688140 0.7260327 0.6497890 0.7161077 NA 0.716622 0.6974875 0.6321335 0.7503774 0.7640009 0.810270 0.6392405 0.698961 0.738645 0.8096519 0.7611212 0.6971303 0.748938 0.8579466 0.7020202 0.709935 0.7131717 0.7293129 0.6776307 0.6165689 0.6408731 0.72342461 0.7315239 0.65328884 0.7410403 0.7702885 0.73737485 0.8027921 0.7323379 5 0.738845 0.720388 2.4145e-02 6 0.697278 0.661964 0.0353133 0.00671166 0.8671010 weaklyHypermeth 1.00000 1.00000 insignificant 0.0603690 0.4432146 insignificant 1 1.00000 insignificant -0.00028678 0.99042531 lowCoverage 1.00000 lowCoverage 0.738845 0.6690018 0.0746908 6 0.697278 0.6323076 0.0649700 5.3362e-05 9.9381e-01 weaklyHypermeth 5.6171e-04 1.0000e+00 weaklyHypermeth 2.7972e-02 9.6232e-01 weaklyHypermeth 2.4452e-01 1.0000000 insignificant 0.04110267 2.1431e-01 insignificant 1.0000e+00 insignificant 0.738845 0.7518248 -0.01371369 6 0.697278 0.715194 -0.0179168 6.9100e-01 1.9590e-01 insignificant 1.0000e+00 1.000000 insignificant 8.7475e-01 0.12582968 insignificant 1.0000000 1.00000 insignificant -0.0181537 0.49251015 insignificant 1.000000 insignificant 0.720388 0.6690018 0.0483041 6 0.661964 0.6323076 2.9657e-02 9.8760e-04 8.5935e-01 weaklyHypermeth 9.4057e-03 1.0000e+00 weaklyHypermeth 2.0556e-02 0.7158210 weaklyHypermeth 1.8031e-01 1.00000 insignificant 0.04138945 2.4294e-01 lowCoverage 1.0000e+00 lowCoverage 0.720388 0.7518248 -0.03624197 6 0.661964 0.715194 -0.0532302 9.7209e-01 9.4351e-02 insignificant 1.0000e+00 1.0000000 insignificant 9.2178e-01 0.20418097 insignificant 1.0000e+00 1.00000 insignificant -0.0178669 0.54761788 lowCoverage 1.00000 lowCoverage 0.6690018 0.7518248 -0.0867968 6 0.6323076 0.715194 -0.08288688 0.99745668 1.0228e-03 weaklyHypometh 1.00000 1.2784e-02 weaklyHypometh 0.9940753 1.0867e-02 weaklyHypometh 1 1.3416e-01 insignificant -0.0592564 1.2069e-01 insignificant 9.6375e-01 insignificant chr20 42199650 42200650 54519 ENSG00000210579,ENSG00000222893 0.7938034 144 5 0.6277778 53 4 0.772778 44 5 0.748718 64 5 0.753074 34 4 0.703201 254 5 0.803178 68 5 0.748947 50 5 0.6730812 72 5 0.7848352 65 5 0.799907 255 5 0.7357143 55 5 0.823261 193 5 NA 0 0 0.7859944 60 5 0.700000 39 5 0.6683333 37 5 0.779985 90 5 0.7153782 141 5 0.699852 208 5 0.519224 119 5 0.638691 319 5 0.775614 115 5 0.624975 442 5 0.663721 280 5 0.641916 127 5 0.638420 449 5 0.629601 141 5 0.6645299 71 5 0.756035 152 5 0.7807018 112 5 0.7495663 434 5 0.5230159 57 5 0.6676768 39 4 0.4280315 185 5 0.6775198 145 5 0.650405 141 5 0.7376942 70 5 0.761095 175 5 0.7885407 159 5 0.774286 98 5 0.767705 156 5 0.808993 181 5 0.8242150 0.6775104 0.7961230 0.7658028 0.7596315 0.725994 0.8213888 0.774665 0.7062111 0.8114533 0.8159966 0.7680800 0.8385869 NA 0.799357 0.7606952 0.6807932 0.8083387 0.7517705 0.718515 0.5614430 0.673757 0.787420 0.6840002 0.6899005 0.6643456 0.691125 0.6561774 0.6794431 0.780324 0.7994786 0.7768273 0.5435447 0.6975909 0.4694094 0.69884348 0.6917033 0.76089980 0.7845305 0.8216279 0.80760122 0.7939235 0.8389154 4 0.763240 0.690692 6.9441e-02 5 0.747122 0.674637 0.0724845 0.00007665 0.3709269 weaklyHypermeth 0.07665 1.00000 weaklyHypermeth 0.0044776 0.8113722 weaklyHypermeth 1 1.00000 insignificant 0.06946019 0.01426346 lowCoverage 1.00000 lowCoverage 0.763240 0.6279435 0.1409316 5 0.747122 0.5950271 0.1520947 6.7022e-07 9.9996e-01 weaklyHypermeth 8.7041e-06 1.0000e+00 weaklyHypermeth 6.6005e-04 9.9999e-01 weaklyHypermeth 9.0418e-03 1.0000000 weaklyHypermeth 0.12898587 3.9823e-02 lowCoverage 3.9753e-01 lowCoverage 0.763240 0.7893368 -0.04183934 5 0.747122 0.779598 -0.0324767 8.8306e-01 2.5764e-02 weaklyHypometh 1.0000e+00 0.736101 insignificant 7.7879e-01 0.04055628 weaklyHypometh 1.0000000 1.00000 insignificant -0.0370809 0.02262209 lowCoverage 0.578881 lowCoverage 0.690692 0.6279435 0.0704701 5 0.674637 0.5950271 7.9610e-02 1.0505e-03 9.6554e-01 weaklyHypermeth 9.9106e-03 1.0000e+00 weaklyHypermeth 5.0820e-02 0.9610451 insignificant 3.8210e-01 1.00000 insignificant 0.05952568 2.8913e-01 lowCoverage 1.0000e+00 lowCoverage 0.690692 0.7893368 -0.11458535 5 0.674637 0.779598 -0.1049612 8.4124e-01 1.1329e-04 weaklyHypometh 1.0000e+00 0.0283234 weaklyHypometh 9.1287e-01 0.00115597 weaklyHypometh 1.0000e+00 0.28899 insignificant -0.1065411 0.00058986 weaklyHypometh 0.19662 insignificant 0.6279435 0.7893368 -0.1857481 5 0.5950271 0.779598 -0.18457140 0.99997618 5.6120e-05 weaklyHypometh 1.00000 8.9080e-04 weaklyHypometh 0.9999424 3.9865e-03 weaklyHypometh 1 6.4439e-02 weaklyHypometh -0.1660668 1.6057e-02 lowCoverage 2.3965e-01 lowCoverage chr20 42469150 42470150 54527 HNF4A ENSG00000101076 0.9437646 190 4 0.8852246 154 5 0.669386 160 5 0.923333 76 4 0.836101 64 5 0.895040 237 5 0.895557 98 5 0.881415 159 5 0.8161931 112 5 0.8939866 125 5 0.883003 223 5 0.8923185 65 5 0.899073 160 5 1.000000 16 2 0.9139324 125 5 0.883333 35 4 0.7714286 48 4 0.891273 97 4 0.9059829 80 4 0.867052 166 5 0.866001 72 5 0.896970 65 5 0.884293 157 4 0.907009 61 5 0.919615 36 4 0.921490 170 5 0.859169 91 5 0.908333 46 5 0.8046154 111 4 0.946194 218 5 0.8970957 233 5 0.9460256 225 5 0.8608333 126 5 0.9931034 99 4 1.0000000 184 3 0.8125000 32 2 0.845933 69 3 0.9420991 172 5 0.925506 210 4 0.9106061 212 5 0.899866 114 4 0.879998 112 4 0.922661 118 4 0.9496061 0.8599613 0.6698779 0.9652610 0.8591638 0.909573 0.8993537 0.899729 0.8225191 0.9098387 0.8813939 0.8675354 0.8791384 0.9280862 0.876320 0.8057229 0.8393367 0.8762888 0.8773298 0.877936 0.8511591 0.867348 0.896354 0.8788590 0.9060125 0.9145178 0.857231 0.9181727 0.8165624 0.943488 0.8708322 0.9518767 0.8750968 0.9954300 0.9829072 0.73022525 0.8919929 0.94352683 0.9007545 0.9222344 0.89163541 0.8904373 0.8992128 3 0.876151 0.911785 -3.5660e-02 5 0.876843 0.915961 -0.0391177 0.99766992 0.0067126 weaklyHypometh 1.00000 0.61024 insignificant 0.9505705 0.0766197 insignificant 1 1.00000 insignificant -0.01903091 0.32134218 lowCoverage 1.00000 lowCoverage 0.876151 0.9222874 -0.0453361 5 0.876843 0.9121668 -0.0353235 7.6914e-01 1.5330e-02 weaklyHypometh 1.0000e+00 7.2998e-01 insignificant 9.6542e-01 1.3150e-02 weaklyHypometh 1.0000e+00 0.9752561 insignificant -0.03170817 4.0638e-01 lowCoverage 1.0000e+00 lowCoverage 0.876151 0.9046997 -0.02704986 4 0.876843 0.911354 -0.0345104 9.7289e-01 9.1722e-02 lowCoverage 1.0000e+00 1.000000 lowCoverage 9.5485e-01 0.08588883 lowCoverage 1.0000000 1.00000 lowCoverage -0.0303574 0.09045649 lowCoverage 1.000000 lowCoverage 0.911785 0.9222874 -0.0122481 5 0.915961 0.9121668 3.7942e-03 2.8756e-01 2.6770e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.0785e-01 0.1086925 insignificant 1.0000e+00 1.00000 insignificant -0.01267725 7.2638e-01 lowCoverage 1.0000e+00 lowCoverage 0.911785 0.9046997 0.00765011 4 0.915961 0.911354 0.0046074 5.7488e-01 7.0751e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 7.3408e-01 0.37278959 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.0113265 0.43559311 lowCoverage 1.00000 lowCoverage 0.9222874 0.9046997 0.0336661 4 0.9121668 0.911354 0.00081317 0.20690665 6.2797e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.1906712 6.4406e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.0013508 9.6943e-01 lowCoverage 1.0000e+00 lowCoverage chr20 42671150 42672150 54547 PKIG ENSG00000168734 0.5920675 256 5 0.4305135 142 5 0.359526 143 5 0.465996 287 6 0.440018 72 5 0.516663 285 6 0.530836 121 6 0.491307 141 6 0.4084580 216 5 0.6060568 149 5 0.594002 218 6 0.3611111 81 3 0.358472 250 5 0.514347 67 5 0.5775540 114 5 0.416667 50 3 0.3479532 104 5 0.413678 337 5 0.4153487 87 5 0.558666 266 5 0.455769 72 5 0.370615 142 5 0.463009 201 5 0.497566 93 5 0.697130 116 5 0.453745 242 6 0.401634 116 5 0.554624 103 5 0.5966954 178 5 0.421822 240 6 0.4821121 172 6 0.5757366 282 6 0.1541570 187 6 0.3342593 116 6 0.3666667 67 3 0.1527778 59 6 0.252551 160 7 0.4119827 224 6 0.551873 335 6 0.3808303 272 6 0.528846 268 5 0.397083 219 5 0.480911 273 6 0.3652016 0.3735035 0.3172964 0.3545673 0.2969021 0.428184 0.3583195 0.322586 0.3230519 0.4063789 0.4424051 0.2686404 0.2655119 0.3981830 0.367146 0.3190789 0.2638793 0.3211631 0.3309425 0.370372 0.3307819 0.273254 0.380810 0.4249628 0.4010205 0.3311713 0.344368 0.3475041 0.3683567 0.318964 0.3440436 0.3898773 0.1373763 0.2819810 0.1925382 0.13048246 0.1922384 0.37496240 0.3412108 0.2871007 0.32281123 0.2461520 0.2957647 5 0.397754 0.408278 -9.2870e-03 5 0.384641 0.407790 -0.0231487 0.93373440 0.6711696 insignificant 1.00000 1.00000 insignificant 0.8790286 0.4208770 insignificant 1 1.00000 insignificant -0.02757610 0.41418654 insignificant 1.00000 insignificant 0.397872 0.2669127 0.1388227 5 0.439590 0.2966647 0.1429249 6.0374e-10 8.1872e-01 weaklyHypermeth 1.0233e-08 1.0000e+00 weaklyHypermeth 2.6163e-05 9.4229e-01 weaklyHypermeth 6.2292e-04 1.0000000 weaklyHypermeth 0.19122967 5.9042e-03 weaklyHypermeth 9.5229e-02 weaklyHypermeth 0.397872 0.3423555 0.04480460 5 0.439590 0.498540 -0.0589501 2.6370e-03 4.8546e-01 weaklyHypermeth 7.3249e-02 1.000000 weaklyHypermeth 2.5673e-02 0.63035461 weaklyHypermeth 0.6938655 1.00000 insignificant 0.0020534 0.95994071 insignificant 1.000000 insignificant 0.408487 0.2669127 0.1478588 5 0.466045 0.2966647 1.6938e-01 1.6638e-07 9.0099e-01 weaklyHypermeth 2.3434e-06 1.0000e+00 weaklyHypermeth 7.9626e-05 0.9625600 weaklyHypermeth 1.7695e-03 1.00000 weaklyHypermeth 0.21880577 2.5662e-03 weaklyHypermeth 4.6658e-02 weaklyHypermeth 0.408487 0.3423555 0.05400118 5 0.466045 0.498540 -0.0324945 1.4184e-02 7.8775e-01 weaklyHypermeth 2.4456e-01 1.0000000 insignificant 7.6216e-03 0.81964534 weaklyHypermeth 2.3817e-01 1.00000 insignificant 0.0296295 0.51322388 insignificant 1.00000 insignificant 0.2669127 0.3423555 -0.0937331 6 0.2966647 0.498540 -0.20187502 0.48151343 7.9549e-04 weaklyHypometh 1.00000 1.0199e-02 weaklyHypometh 0.7660698 1.3445e-02 weaklyHypometh 1 1.5634e-01 insignificant -0.1891763 8.8752e-03 weaklyHypometh 1.5849e-01 insignificant chr20 42671550 42672550 54548 PKIG ENSG00000168734 0.4144473 402 8 0.2980478 298 8 0.251668 240 8 0.310664 466 9 0.293346 135 8 0.361664 504 9 0.374710 229 9 0.343915 246 9 0.2736281 374 8 0.4242398 279 8 0.396001 310 9 0.2472767 165 6 0.238982 413 8 0.342898 105 8 0.3651379 230 8 0.277778 129 6 0.2364133 199 8 0.282730 561 8 0.2768991 139 8 0.452287 389 8 0.281795 107 8 0.247077 261 8 0.331249 298 8 0.298539 153 8 0.464753 185 8 0.273497 409 9 0.281144 202 8 0.310098 147 8 0.3769029 262 8 0.281215 383 9 0.3214081 319 9 0.3368751 439 9 0.1027713 288 9 0.2228395 143 7 0.2200000 113 4 0.1018519 83 9 0.236607 226 10 0.2983147 314 9 0.387740 564 9 0.2538869 444 9 0.370192 395 8 0.252209 375 8 0.341183 441 9 0.2172628 0.2222017 0.1887634 0.2109363 0.1766306 0.254732 0.2162875 0.191910 0.1948433 0.2417597 0.2631921 0.1656882 0.1579562 0.2368838 0.221746 0.1898239 0.1602726 0.1973015 0.1968817 0.227681 0.2051031 0.162562 0.232419 0.2528154 0.2385719 0.1998064 0.204869 0.2150513 0.2262221 0.189755 0.2046757 0.2346969 0.0817268 0.1677539 0.1156770 0.07762557 0.1303001 0.23549837 0.2061774 0.1707996 0.19204426 0.1496583 0.1804905 8 0.233523 0.254660 -6.2400e-03 8 0.314721 0.252224 0.0624966 0.99187696 0.7002724 insignificant 1.00000 1.00000 insignificant 0.8682848 0.6242573 insignificant 1 1.00000 insignificant 0.00609053 0.78709524 insignificant 1.00000 insignificant 0.233563 0.1910883 0.0921510 8 0.340948 0.2599189 0.0810289 2.2305e-07 3.2766e-01 weaklyHypermeth 3.1416e-06 1.0000e+00 weaklyHypermeth 5.1882e-04 8.6285e-01 weaklyHypermeth 7.7860e-03 1.0000000 weaklyHypermeth 0.12607252 8.6320e-03 weaklyHypermeth 1.2694e-01 insignificant 0.233471 0.2131591 0.02510405 8 0.309137 0.351064 -0.0419268 1.2291e-02 4.3405e-01 weaklyHypermeth 2.4583e-01 1.000000 insignificant 7.3890e-02 0.61028246 insignificant 1.0000000 1.00000 insignificant 0.0020944 0.95031561 insignificant 1.000000 insignificant 0.254741 0.1910883 0.0982952 8 0.273243 0.2599189 1.3324e-02 3.1568e-05 7.9133e-01 weaklyHypermeth 3.6707e-04 1.0000e+00 weaklyHypermeth 2.7950e-03 0.9097139 weaklyHypermeth 3.2883e-02 1.00000 weaklyHypermeth 0.11998199 1.1010e-02 weaklyHypermeth 1.6469e-01 insignificant 0.255468 0.2131591 0.03326281 8 0.327892 0.351064 -0.0231724 3.2960e-02 8.1249e-01 weaklyHypermeth 4.9194e-01 1.0000000 insignificant 2.3621e-02 0.85832835 weaklyHypermeth 4.9210e-01 1.00000 insignificant -0.0039961 0.90779754 insignificant 1.00000 insignificant 0.1907216 0.2131591 -0.0622687 9 0.2119026 0.351064 -0.13916147 0.33191229 2.1671e-03 weaklyHypometh 1.00000 2.4350e-02 weaklyHypometh 0.7353892 2.8117e-02 weaklyHypometh 1 2.8691e-01 insignificant -0.1239781 1.8290e-02 weaklyHypometh 2.5760e-01 insignificant chr20 43381450 43382450 54572 MATN4 ENSG00000124159 0.5468340 364 12 0.5043965 466 12 0.635654 281 14 0.663169 339 12 0.697858 270 12 0.625337 592 15 0.589195 303 15 0.487773 312 13 0.5714693 288 15 0.6531630 326 15 0.615537 505 14 0.5514060 227 12 0.610255 264 15 0.754979 153 10 0.6484267 247 10 0.574506 149 9 0.5646023 811 12 0.587455 354 15 0.5852211 241 12 0.549625 473 15 0.652120 156 14 0.531185 166 11 0.525838 309 12 0.629299 210 13 0.730403 195 10 0.649343 433 14 0.592317 306 13 0.432819 132 10 0.5666499 250 11 0.639206 401 15 0.5479105 395 12 0.6724802 648 15 0.5833666 375 15 0.5657569 230 11 0.5416749 336 10 0.5611806 103 6 0.507320 289 14 0.5260214 401 13 0.580057 322 13 0.6980120 322 12 0.691904 337 13 0.631650 244 11 0.635826 378 11 0.7592661 0.6978385 0.7207292 0.7999460 0.7687987 0.774603 0.7782382 0.706580 0.6675237 0.7795720 0.7519584 0.7073482 0.7674703 0.7603359 0.734501 0.7811294 0.6942142 0.7086808 0.7094724 0.755345 0.7095340 0.773260 0.719697 0.8135557 0.7844158 0.7743493 0.730740 0.7096994 0.7556206 0.715007 0.7792094 0.7850147 0.6679092 0.6503572 0.6459233 0.74322126 0.6223058 0.77649326 0.8099242 0.7922302 0.79110863 0.7419682 0.7593962 8 0.680075 0.676756 -1.8393e-02 15 0.586077 0.603301 -0.0172236 0.99844520 0.0195130 weaklyHypometh 1.00000 0.84839 insignificant 0.9858129 0.1946635 insignificant 1 1.00000 insignificant 0.00337888 0.90297788 insignificant 1.00000 insignificant 0.680542 0.6257209 0.0428424 13 0.566759 0.5386047 0.0281541 1.4056e-06 9.6156e-01 weaklyHypermeth 1.7569e-05 1.0000e+00 weaklyHypermeth 6.4275e-04 9.9824e-01 weaklyHypermeth 9.0418e-03 1.0000000 weaklyHypermeth 0.05328970 8.6228e-03 weaklyHypermeth 1.2694e-01 insignificant 0.679799 0.7685590 -0.03876351 12 0.550084 0.543783 0.0063011 9.2263e-01 4.4517e-02 weaklyHypometh 1.0000e+00 0.962444 insignificant 9.3064e-01 0.09416265 insignificant 1.0000000 1.00000 insignificant -0.0466469 0.11135156 insignificant 1.000000 insignificant 0.676773 0.6257209 0.0620116 13 0.599168 0.5386047 6.0563e-02 8.7275e-08 9.9711e-01 weaklyHypermeth 1.2835e-06 1.0000e+00 weaklyHypermeth 3.0693e-04 0.9979193 weaklyHypermeth 5.4104e-03 1.00000 weaklyHypermeth 0.04991082 7.3820e-02 insignificant 6.1516e-01 insignificant 0.676765 0.7685590 -0.02227407 12 0.590545 0.543783 0.0467615 3.2891e-01 5.2722e-01 insignificant 1.0000e+00 1.0000000 insignificant 5.6269e-01 0.40215267 insignificant 1.0000e+00 1.00000 insignificant -0.0500258 0.14168749 insignificant 1.00000 insignificant 0.6257209 0.7688944 -0.0812605 12 0.5386047 0.547953 -0.00934811 0.99832438 5.9184e-04 weaklyHypometh 1.00000 7.7874e-03 weaklyHypometh 0.9999303 1.1154e-02 weaklyHypometh 1 1.3602e-01 insignificant -0.0999366 6.2808e-03 weaklyHypometh 1.1851e-01 insignificant chr20 43399250 43400250 54573 ENSG00000210619 0.6485772 369 7 0.6696223 236 5 0.449644 267 7 0.642578 349 7 0.646571 123 7 0.662376 283 7 0.511467 267 7 0.611974 219 7 0.6085098 328 7 0.6073774 288 7 0.727539 301 7 0.4560097 239 7 0.508156 357 7 0.576351 127 5 0.6422278 266 7 0.416057 118 7 0.5115287 144 7 0.412803 340 7 0.6128313 195 7 0.569001 250 7 0.681066 122 6 0.498920 127 5 0.783355 200 7 0.595524 92 6 0.433121 99 5 0.542530 376 7 0.561404 156 7 0.505882 135 7 0.6997163 244 7 0.577586 391 7 0.6090527 339 7 0.7182408 339 7 0.0084034 453 7 0.0065648 285 5 0.0000000 199 7 0.0000000 68 4 0.039271 120 7 0.0014577 400 7 0.597332 413 7 0.3645863 332 7 0.672628 258 7 0.359139 315 7 0.500690 249 7 0.6061543 0.5726027 0.3950448 0.6452004 0.6383106 0.644050 0.4942510 0.603657 0.5760626 0.6327943 0.7154615 0.4422731 0.4539217 0.6051478 0.579396 0.4368167 0.4346938 0.3756069 0.5699779 0.538040 0.6568789 0.359684 0.756987 0.5280442 0.5319940 0.5206801 0.571130 0.4601535 0.7155719 0.542965 0.5506213 0.6893829 0.0028728 0.0067503 0.0000000 0.00000000 0.0380510 0.00049834 0.5455585 0.3144282 0.59359262 0.2929770 0.4417473 5 0.574023 0.605344 -3.1717e-02 7 0.577359 0.609379 -0.0320200 0.98663325 0.0842959 insignificant 1.00000 1.00000 insignificant 0.9746397 0.2047297 insignificant 1 1.00000 insignificant -0.02597307 0.47903959 insignificant 1.00000 insignificant 0.574023 0.0085246 0.5731887 7 0.577359 0.0070257 0.5703336 2.4999e-63 1.0000e+00 hypermethylated 3.1249e-61 1.0000e+00 hypermethylated 1.0741e-19 1.0000e+00 hypermethylated 1.3427e-17 1.0000000 hypermethylated 0.56527714 3.7889e-18 hypermethylated 9.4723e-16 hypermethylated 0.574023 0.4358647 0.10215810 7 0.577359 0.499470 0.0778897 3.4773e-04 7.5003e-01 weaklyHypermeth 1.3909e-02 1.000000 weaklyHypermeth 7.7380e-03 0.93785816 weaklyHypermeth 0.2763557 1.00000 insignificant 0.0756851 0.30109898 insignificant 1.000000 insignificant 0.605344 0.0085246 0.5995414 7 0.609379 0.0070257 6.0235e-01 1.1048e-49 1.0000e+00 hypermethylated 1.5782e-47 1.0000e+00 hypermethylated 2.2961e-16 1.0000000 hypermethylated 2.8701e-14 1.00000 hypermethylated 0.59125021 2.0884e-10 hypermethylated 3.4419e-08 hypermethylated 0.605344 0.4358647 0.13175025 7 0.609379 0.499470 0.1099096 4.8389e-04 9.9134e-01 weaklyHypermeth 1.6130e-02 1.0000000 weaklyHypermeth 5.1291e-03 0.99866743 weaklyHypermeth 1.7161e-01 1.00000 insignificant 0.1016581 0.19150038 insignificant 1.00000 insignificant 0.0085246 0.4358647 -0.4571907 7 0.0070257 0.499470 -0.49244392 1.00000000 7.6328e-27 hypomethylated 1.00000 1.2069e-24 hypomethylated 1.0000000 8.5651e-12 hypomethylated 1 1.4275e-09 hypomethylated -0.4895921 1.3257e-03 weaklyHypometh 3.6824e-02 weaklyHypometh chr20 43885050 43886050 54588 UBE2C ENSG00000175063 0.7078557 418 15 0.6001388 539 15 0.689153 643 15 0.767788 592 15 0.758258 447 15 0.843365 591 16 0.570834 445 15 0.725981 511 15 0.6646267 539 15 0.7153295 618 15 0.620781 567 15 0.5375082 426 15 0.762462 566 15 0.664787 482 15 0.6627343 664 15 0.348808 323 15 0.5318182 56 4 0.644892 533 15 0.6830152 770 15 0.837604 495 16 0.647891 203 14 0.700527 282 15 0.702926 371 15 0.538013 308 16 0.942968 187 15 0.788023 541 15 0.672412 476 16 0.737701 232 15 0.6531831 503 16 0.800303 551 15 0.8161889 628 15 0.6664868 615 15 0.0763143 471 15 0.1708249 298 15 0.2024322 706 12 0.2705467 81 7 0.236938 549 16 0.1699750 747 15 0.788411 561 15 0.5353848 513 15 0.740111 364 12 0.755874 419 15 0.641585 524 15 0.7197862 0.6073566 0.6967740 0.7679199 0.8144558 0.854500 0.5915597 0.806249 0.7173185 0.7024216 0.6433200 0.5926478 0.7734403 0.7009099 0.732740 0.3873771 0.5325578 0.6679755 0.7618423 0.880071 0.7517185 0.658984 0.721313 0.6650866 0.9426722 0.8829665 0.728664 0.7420904 0.6684974 0.813724 0.8522706 0.6116075 0.0702913 0.1007834 0.1070052 0.24440135 0.2044842 0.09676723 0.8008274 0.5723506 0.70224736 0.7261467 0.6358576 15 0.713992 0.757198 -2.8219e-02 15 0.604531 0.624649 -0.0201186 0.99794567 0.0394941 weaklyHypometh 1.00000 1.00000 insignificant 0.9999753 0.0142580 weaklyHypometh 1 1.00000 insignificant -0.05533167 0.17282000 insignificant 1.00000 insignificant 0.713964 0.2026648 0.5598610 15 0.585699 0.1723305 0.4133683 8.0689e-95 1.0000e+00 hypermethylated 4.0345e-92 1.0000e+00 hypermethylated 8.7176e-27 1.0000e+00 hypermethylated 2.1794e-24 1.0000000 hypermethylated 0.47904845 2.5129e-09 hypermethylated 1.4410e-07 hypermethylated 0.714650 0.6556069 0.03043485 15 0.701834 0.665690 0.0361436 1.4508e-01 6.6326e-01 insignificant 1.0000e+00 1.000000 insignificant 1.9296e-01 0.41800544 insignificant 1.0000000 1.00000 insignificant -0.0253861 0.64624772 insignificant 1.000000 insignificant 0.757303 0.2026648 0.5908921 15 0.630585 0.1723305 4.5825e-01 7.6373e-76 1.0000e+00 hypermethylated 3.8186e-73 1.0000e+00 hypermethylated 9.3658e-27 1.0000000 hypermethylated 9.3658e-24 1.00000 hypermethylated 0.53438012 1.6729e-09 hypermethylated 1.4309e-07 hypermethylated 0.759385 0.6558824 0.05620930 15 0.727837 0.704848 0.0229890 2.1293e-03 9.7807e-01 weaklyHypermeth 5.3232e-02 1.0000000 weaklyHypermeth 3.2027e-02 0.97752902 weaklyHypermeth 6.0428e-01 1.00000 insignificant 0.0299456 0.60254179 insignificant 1.00000 insignificant 0.2028833 0.6558824 -0.5488485 15 0.1834671 0.704848 -0.52138126 1.00000000 7.1361e-47 hypomethylated 1.00000 3.5681e-44 hypomethylated 1.0000000 2.9731e-17 hypomethylated 1 2.9731e-14 hypomethylated -0.5044345 4.4865e-05 hypomethylated 2.9910e-03 hypomethylated chr20 43887050 43888050 54589 UBE2C ENSG00000175063 0.7779174 136 6 0.6764520 119 6 0.574074 85 7 0.696519 97 6 0.625000 34 3 0.703641 267 8 0.668511 69 5 0.697262 131 8 0.6344017 120 6 0.7808668 117 7 0.772320 210 8 0.6706349 58 5 0.689274 118 6 0.733333 16 1 0.7396598 89 6 0.586310 52 5 0.7034493 53 5 0.675170 96 6 0.8151517 148 6 0.840940 255 6 0.493770 68 5 0.648160 82 6 0.801354 86 6 0.653773 90 6 0.744792 41 4 0.607976 157 8 0.668163 77 5 0.550128 70 6 0.7861953 96 6 0.721269 202 8 0.6794060 166 6 0.7603022 284 8 0.7441030 126 8 0.8085069 74 6 0.5663499 105 6 0.6733333 42 5 0.672778 70 4 0.7812226 169 8 0.766448 139 6 0.6452104 158 6 0.719179 108 6 0.832171 183 6 0.674174 137 6 0.7687766 0.7394613 0.6202749 0.6830898 0.5702320 0.730273 0.6953259 0.736742 0.6529540 0.7436959 0.8080623 0.6817471 0.6935667 0.7299969 0.762306 0.7227939 0.6292520 0.7645810 0.7299364 0.769821 0.7309156 0.756360 0.771855 0.7770998 0.7948167 0.6982464 0.805021 0.7744000 0.7962746 0.673977 0.6904720 0.7531013 0.6116187 0.7314576 0.7065247 0.69883622 0.6438717 0.72403261 0.7110325 0.7786111 0.78347051 0.7773592 0.7465801 4 0.735242 0.739958 -4.7301e-03 6 0.664731 0.670015 -0.0052847 0.57974106 0.4520592 insignificant 1.00000 1.00000 insignificant 0.5997557 0.1739358 insignificant 1 1.00000 insignificant 0.02677040 0.40431539 insignificant 1.00000 insignificant 0.735242 0.7150171 0.0257280 6 0.664731 0.7268420 -0.0621114 1.1190e-01 1.8848e-01 insignificant 6.6212e-01 1.0000e+00 insignificant 3.6125e-01 3.9151e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.00467123 9.0916e-01 insignificant 1.0000e+00 insignificant 0.737191 0.7475862 -0.02666230 6 0.738589 0.690411 0.0481786 5.1169e-01 2.0256e-01 insignificant 1.0000e+00 1.000000 insignificant 8.3703e-01 0.17018641 insignificant 1.0000000 1.00000 insignificant -0.0243923 0.53291455 insignificant 1.000000 insignificant 0.739958 0.7150171 0.0307215 6 0.670015 0.7268420 -5.6827e-02 1.6309e-01 2.3152e-01 insignificant 9.0104e-01 1.0000e+00 insignificant 2.3064e-01 0.4640271 insignificant 1.0000e+00 1.00000 insignificant -0.03144162 5.0148e-01 insignificant 1.0000e+00 insignificant 0.744484 0.7475862 -0.01321082 6 0.712715 0.690411 0.0223044 2.6735e-01 1.3172e-01 insignificant 1.0000e+00 1.0000000 insignificant 4.4188e-01 0.22770031 insignificant 1.0000e+00 1.00000 insignificant -0.0511627 0.26194311 insignificant 1.00000 insignificant 0.7169811 0.7475862 -0.0540020 6 0.7705651 0.690411 0.08015424 0.95551737 7.9978e-02 insignificant 1.00000 5.2273e-01 insignificant 0.8141179 4.3459e-02 weaklyHypometh 1 3.7465e-01 insignificant -0.0197211 6.9768e-01 insignificant 1.0000e+00 insignificant chr20 43935050 43936050 54594 ZSWIM3 ENSG00000132801 0.6161905 160 5 0.4763373 84 5 0.571813 66 5 0.446916 160 5 0.742593 51 5 0.684876 202 5 0.580606 56 5 0.627514 93 5 0.6752137 70 5 0.5285714 44 5 0.580351 219 5 0.3285714 33 5 0.708689 92 5 0.635204 53 5 0.6621154 75 5 0.666667 20 3 0.0000000 3 0 0.558873 173 5 0.5476315 92 5 0.599299 169 5 0.628894 61 5 0.500541 47 5 0.684876 90 5 0.736869 66 5 0.565556 45 5 0.632707 133 5 0.614129 107 5 0.561111 38 4 0.6778259 121 5 0.564119 96 5 0.6213686 125 5 0.5009259 231 5 0.4587302 62 6 0.6083333 48 5 0.5645382 144 5 0.6500000 14 0 0.529026 70 5 0.5593878 134 5 0.575397 122 5 0.7960317 124 5 0.665332 124 5 0.677083 93 5 0.637322 131 5 0.6232412 0.5756538 0.5760703 0.5439251 0.6970508 0.628829 0.5900299 0.630945 0.6189300 0.5422546 0.6196780 0.3336273 0.7482550 0.6938933 0.668750 0.6728395 NA 0.6246963 0.6636538 0.627496 0.6874826 0.612855 0.691320 0.6909919 0.5747599 0.6917442 0.665812 0.4894033 0.6232270 0.683403 0.6269425 0.6095860 0.4351558 0.6315844 0.6834990 0.65432099 0.5447635 0.52099353 0.6956202 0.7580609 0.60673534 0.6206860 0.6451321 5 0.617232 0.642241 -2.3395e-02 5 0.572231 0.616358 -0.0441263 0.69474350 0.0302526 weaklyHypometh 1.00000 0.90156 insignificant 0.6935251 0.0582577 insignificant 1 1.00000 insignificant -0.04550848 0.28967606 lowCoverage 1.00000 lowCoverage 0.617232 0.5762712 0.0356224 5 0.572231 0.6164364 -0.0442049 1.8886e-01 7.6305e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.8881e-01 8.2534e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.00023240 9.9597e-01 lowCoverage 1.0000e+00 lowCoverage 0.617524 0.6700337 -0.04647972 5 0.575011 0.640043 -0.0650326 9.5830e-01 1.1249e-01 insignificant 1.0000e+00 1.000000 insignificant 9.8494e-01 0.06548849 insignificant 1.0000000 1.00000 insignificant -0.1083316 0.05423133 lowCoverage 0.986024 lowCoverage 0.642241 0.5762712 0.0591818 5 0.616358 0.6164364 -7.8623e-05 3.3830e-02 7.4788e-01 weaklyHypermeth 2.2404e-01 1.0000e+00 insignificant 2.1945e-01 0.8228253 insignificant 1.0000e+00 1.00000 insignificant 0.04574087 2.0590e-01 lowCoverage 1.0000e+00 lowCoverage 0.640693 0.6700337 -0.02573336 5 0.552417 0.640043 -0.0876261 2.7165e-01 3.0751e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant 3.5020e-01 0.07190330 insignificant 1.0000e+00 1.00000 insignificant -0.0628231 0.17610038 lowCoverage 1.00000 lowCoverage 0.5753715 0.6700337 -0.0819730 5 0.5525091 0.640043 -0.08753434 0.99216193 4.3565e-02 weaklyHypometh 1.00000 3.0897e-01 insignificant 0.9954283 4.8894e-02 weaklyHypometh 1 4.0745e-01 insignificant -0.1085640 4.3064e-02 lowCoverage 4.7323e-01 lowCoverage chr20 44075550 44076550 54601 MMP9 ENSG00000100985 0.0677280 1389 35 0.0791440 1197 39 0.055549 1125 39 0.061828 1134 39 0.041509 895 40 0.125781 1767 39 0.034806 1047 38 0.048832 953 39 0.0513313 960 35 0.0302247 925 31 0.144970 1214 39 0.0536090 852 36 0.029137 861 35 0.051842 360 18 0.0643419 1044 34 0.054010 815 35 0.0147803 491 20 0.083529 1394 35 0.0590799 900 39 0.166071 1669 35 0.057579 436 31 0.099672 444 21 0.048322 1079 40 0.117152 558 31 0.089755 862 28 0.076142 1507 39 0.093109 1098 27 0.081237 434 25 0.0588916 940 39 0.054694 1702 39 0.0796207 1481 39 0.0924648 1615 35 0.0371680 782 36 0.0076463 901 38 0.0889612 1307 33 0.0382476 653 21 0.076955 579 33 0.0520099 1451 39 0.079491 1923 35 0.1023002 1592 39 0.095807 1098 35 0.083614 1280 35 0.078268 1286 39 0.0614992 0.0436411 0.0657278 0.0396693 0.0488199 0.076222 0.0522030 0.063107 0.0518616 0.0589007 0.0918930 0.0790575 0.0339473 0.0689455 0.056229 0.0600880 0.0392708 0.0708792 0.0436873 0.057762 0.0613000 0.022632 0.066151 0.0649208 0.0630842 0.0428112 0.051914 0.0545469 0.0645380 0.041308 0.0426261 0.0850579 0.0152473 0.0076360 0.0321210 0.03397895 0.0283980 0.02842945 0.0510283 0.0381582 0.04707282 0.0481497 0.0456189 25 0.045973 0.042092 5.9880e-03 39 0.097127 0.077284 0.0198437 0.13004208 0.9999841 insignificant 1.00000 1.00000 insignificant 0.1839715 0.9999968 insignificant 1 1.00000 insignificant -0.01314809 0.22138637 insignificant 1.00000 insignificant 0.046090 0.0254148 0.0240452 39 0.121356 0.0602516 0.0611040 1.5850e-10 8.7212e-01 weaklyHypermeth 3.0480e-09 1.0000e+00 weaklyHypermeth 7.4586e-10 9.9905e-01 weaklyHypermeth 3.7293e-08 1.0000000 weaklyHypermeth 0.01574053 3.1125e-01 insignificant 1.0000e+00 insignificant 0.045702 0.0291208 0.00876417 39 0.084241 0.132463 -0.0482218 6.1881e-01 7.2992e-01 insignificant 1.0000e+00 1.000000 insignificant 9.2630e-01 0.58821161 insignificant 1.0000000 1.00000 insignificant -0.0219910 0.03594401 weaklyHypometh 0.733551 insignificant 0.041931 0.0254237 0.0181914 39 0.075739 0.0627108 1.3028e-02 1.2930e-05 9.6444e-01 weaklyHypermeth 1.5769e-04 1.0000e+00 weaklyHypermeth 7.2700e-05 0.9932544 weaklyHypermeth 1.6523e-03 1.00000 weaklyHypermeth 0.02888862 6.5884e-02 insignificant 5.7291e-01 insignificant 0.041931 0.0288945 0.00328838 39 0.074039 0.134159 -0.0601200 9.8316e-01 1.0372e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.9857e-01 0.13736629 insignificant 1.0000e+00 1.00000 insignificant -0.0088429 0.26833216 insignificant 1.00000 insignificant 0.0256093 0.0290300 -0.0153871 39 0.0831190 0.154567 -0.07144779 0.99999754 2.5363e-08 weaklyHypometh 1.00000 7.2467e-07 weaklyHypometh 1.0000000 7.0395e-06 weaklyHypometh 1 3.0607e-04 weaklyHypometh -0.0377315 2.4489e-02 weaklyHypometh 3.2138e-01 insignificant chr20 45381950 45382950 54642 ZMYND8 ENSG00000101040 0.3282073 232 7 0.3932124 263 7 0.480274 184 7 0.487968 223 7 0.530183 130 7 0.426516 388 7 0.472212 149 7 0.386661 211 7 0.4357603 270 7 0.4550409 198 7 0.456921 199 7 0.4330808 158 7 0.557323 197 7 0.386501 186 6 0.4520179 262 7 0.586466 98 6 0.4493279 83 6 0.364174 254 7 0.4416826 176 7 0.410692 319 7 0.459094 165 7 0.537332 136 7 0.446351 176 7 0.545763 189 7 0.328765 115 7 0.536437 245 7 0.415277 185 7 0.430754 204 7 0.5014583 186 7 0.534853 327 7 0.4966621 230 7 0.3536869 248 7 0.4024644 191 7 0.4837662 70 6 0.2092014 201 6 0.3571429 30 3 0.615344 313 7 0.5376632 264 7 0.381376 283 7 0.4730830 183 7 0.422997 220 7 0.562130 159 7 0.406341 218 7 0.2620163 0.3330287 0.4031702 0.4064231 0.4359738 0.364952 0.3811636 0.320608 0.3528561 0.3718047 0.3815406 0.4005051 0.4711951 0.3327553 0.373501 0.5047503 0.3731689 0.3068866 0.3654859 0.350625 0.4393651 0.447302 0.365590 0.4434736 0.2794830 0.4416481 0.335149 0.4096015 0.4232990 0.450567 0.4070072 0.3371952 0.3541410 0.4149767 0.2306090 0.31666667 0.5301373 0.46364374 0.3308870 0.4567473 0.35961942 0.4744963 0.3512288 7 0.339713 0.395677 -4.2511e-02 7 0.396791 0.438965 -0.0421737 0.99187760 0.0306529 weaklyHypometh 1.00000 0.90156 insignificant 0.9328509 0.2629071 insignificant 1 1.00000 insignificant -0.01882514 0.46717582 insignificant 1.00000 insignificant 0.339713 0.4462114 -0.0863903 7 0.396791 0.4335529 -0.0367617 5.1714e-01 6.2972e-04 weaklyHypometh 1.0000e+00 4.8440e-02 weaklyHypometh 4.8342e-01 1.1552e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.01244732 8.4407e-01 insignificant 1.0000e+00 insignificant 0.339713 0.3715898 -0.01474582 7 0.396791 0.382751 0.0140403 1.8336e-01 1.3285e-01 insignificant 1.0000e+00 1.000000 insignificant 7.2982e-01 0.03159207 weaklyHypometh 1.0000000 1.00000 insignificant -0.0024742 0.94598127 insignificant 1.000000 insignificant 0.395677 0.4462114 -0.0281533 7 0.438965 0.4335529 5.4120e-03 3.1533e-01 7.4445e-03 weaklyHypometh 1.0000e+00 6.7678e-01 insignificant 3.9511e-01 0.2149977 insignificant 1.0000e+00 1.00000 insignificant 0.03127246 6.3342e-01 insignificant 1.0000e+00 insignificant 0.395677 0.3715898 0.02263186 7 0.438965 0.382751 0.0562139 2.4208e-02 1.3069e-01 weaklyHypermeth 3.8426e-01 1.0000000 insignificant 6.3034e-01 0.08150368 insignificant 1.0000e+00 1.00000 insignificant 0.0163509 0.68136532 insignificant 1.00000 insignificant 0.4462114 0.3715898 0.0727171 7 0.4335529 0.382751 0.05080197 0.00240499 8.2793e-01 weaklyHypermeth 0.24050 1.0000e+00 insignificant 0.3175401 4.7931e-01 insignificant 1 1.0000e+00 insignificant -0.0149216 8.2937e-01 insignificant 1.0000e+00 insignificant chr20 45399850 45400850 54646 ZMYND8 ENSG00000101040 0.9332496 154 6 0.8988035 456 6 0.858413 294 6 0.896151 170 5 0.854271 198 6 0.897078 382 6 0.934495 228 6 0.932469 278 6 0.8423815 209 6 0.9212835 248 6 0.913295 333 6 0.7544208 154 6 0.885864 235 6 0.960244 185 4 0.9003167 299 6 0.932109 113 6 0.8490967 386 3 0.858510 234 4 0.6814112 224 4 0.929897 270 6 0.829602 135 6 0.901157 120 4 0.915764 185 6 0.855825 135 5 0.951632 74 4 0.930772 365 6 0.778782 236 5 0.939785 151 5 0.9027823 273 4 0.917245 371 6 0.9355190 315 6 0.9102139 317 6 0.8595604 260 6 0.5901525 104 4 0.9720731 259 3 0.6666667 29 3 0.791873 274 6 0.8995921 321 5 0.722954 194 4 0.8606373 165 4 0.876990 122 4 0.669476 130 4 0.913613 184 4 0.8799715 0.8877566 0.8207915 0.9248661 0.8333209 0.906758 0.9075559 0.920358 0.8416071 0.9003149 0.9185997 0.8604190 0.9090032 0.9147870 0.929332 0.9030930 0.9429476 0.8489669 0.9407777 0.918181 0.8922763 0.860215 0.936124 0.8077361 0.9271144 0.9091937 0.759872 0.8917020 0.8560532 0.936219 0.9241532 0.9041176 0.8890696 0.7076974 0.9435267 0.65298692 0.8367529 0.76803265 0.9106206 0.8617176 0.84198077 0.6912697 0.9044180 4 0.900417 0.888681 9.8308e-03 6 0.897316 0.891655 0.0056611 0.22758785 0.4631145 insignificant 1.00000 1.00000 insignificant 0.4714514 0.2760794 insignificant 1 1.00000 insignificant -0.01573515 0.45772705 insignificant 1.00000 insignificant 0.900417 0.8404170 0.0602619 5 0.897316 0.8394971 0.0578193 1.5616e-02 9.9215e-01 weaklyHypermeth 1.0480e-01 1.0000e+00 insignificant 3.1892e-01 8.9594e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.08503505 2.1546e-01 lowCoverage 1.0000e+00 lowCoverage 0.900417 0.8352201 0.06049139 4 0.897316 0.855699 0.0416174 3.5803e-03 7.2696e-01 lowCoverage 9.4219e-02 1.000000 lowCoverage 4.6031e-02 0.77304436 lowCoverage 0.9869019 1.00000 lowCoverage 0.0729538 0.20469366 lowCoverage 1.000000 lowCoverage 0.888681 0.8404170 0.0484777 5 0.891655 0.8394971 5.2158e-02 3.4803e-02 9.6683e-01 weaklyHypermeth 2.2897e-01 1.0000e+00 insignificant 1.9939e-01 0.7753147 insignificant 1.0000e+00 1.00000 insignificant 0.10077021 1.5252e-01 lowCoverage 1.0000e+00 lowCoverage 0.888681 0.8352201 0.05681506 4 0.891655 0.855699 0.0359563 2.5536e-03 6.9338e-01 lowCoverage 6.0801e-02 1.0000000 lowCoverage 3.3425e-02 0.76176266 lowCoverage 6.1899e-01 1.00000 lowCoverage 0.0886890 0.13709828 lowCoverage 1.00000 lowCoverage 0.8404170 0.8352201 -0.0036680 4 0.8394971 0.855699 -0.01620183 0.67550208 2.9100e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.5505367 6.7351e-01 lowCoverage 1 1.0000e+00 lowCoverage -0.0120812 8.7699e-01 lowCoverage 1.0000e+00 lowCoverage chr20 45444150 45445150 54651 ZMYND8 ENSG00000101040 0.8798716 145 4 0.7852846 112 5 0.796088 106 5 0.929503 80 5 0.752821 79 5 0.769182 133 4 0.835345 138 5 0.877762 50 3 0.8418843 104 4 0.8756313 90 4 0.861948 276 7 0.8151515 49 4 0.821762 83 5 0.500000 2 0 0.9288420 135 4 0.894983 102 4 0.9621164 79 4 0.812576 71 4 0.7866816 109 6 0.899369 114 6 0.812831 119 4 0.947222 32 4 0.972360 134 4 0.831517 82 7 0.886111 39 4 0.817035 127 5 0.774603 55 4 0.898611 34 2 0.8201465 49 5 0.844652 112 5 0.8503401 101 5 0.7984178 205 4 0.8394700 95 5 0.9743961 82 4 0.8393699 198 7 0.6933333 24 4 0.831073 101 5 0.9059450 100 5 0.825657 172 7 0.8154877 147 5 0.894089 88 4 0.969801 135 4 0.895239 116 7 0.9395567 0.8417645 0.9717244 0.9455621 0.9439411 0.906505 0.9324570 0.946186 0.8878115 0.9222252 0.9664580 0.9022324 0.9461848 NA 0.937903 0.8972512 0.9525454 0.9709777 0.8726562 0.955822 0.9199840 0.961604 0.956213 0.9348543 0.9170611 0.9546175 0.932643 0.8761917 0.8718252 0.940187 0.9371437 0.9483745 0.9119541 0.9659034 0.9852871 0.88836292 0.9615644 0.97140652 0.9479844 0.9210247 0.91899612 0.9731105 0.9537116 4 0.895428 0.906077 -8.2918e-03 4 0.775284 0.876431 -0.1011467 0.84741915 0.0691030 lowCoverage 1.00000 1.00000 lowCoverage 0.8722853 0.4923569 lowCoverage 1 1.00000 lowCoverage -0.02314715 0.41133089 lowCoverage 1.00000 lowCoverage 0.896249 0.8700000 -0.0168196 6 0.838420 0.8360869 0.0023329 5.2407e-01 4.0893e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 5.1823e-01 2.3229e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.01592431 7.2553e-01 lowCoverage 1.0000e+00 lowCoverage 0.896249 0.9255319 -0.01815748 4 0.838420 0.869321 -0.0309014 9.1386e-01 1.4298e-02 lowCoverage 1.0000e+00 0.510646 lowCoverage 8.4041e-01 0.11927828 lowCoverage 1.0000000 1.00000 lowCoverage -0.0487146 0.19970231 lowCoverage 1.000000 lowCoverage 0.905991 0.8700000 -0.0017219 5 0.858778 0.8360869 2.2691e-02 6.2988e-01 5.0659e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.4900e-01 0.4239112 insignificant 1.0000e+00 1.00000 insignificant 0.00722283 8.6803e-01 lowCoverage 1.0000e+00 lowCoverage 0.905991 0.9255319 -0.00734831 4 0.858778 0.869321 -0.0105433 8.6211e-01 3.9224e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 8.6547e-01 0.38727048 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.0255675 0.46162297 lowCoverage 1.00000 lowCoverage 0.8700000 0.9255319 -0.0070073 4 0.8360869 0.869321 -0.03323436 0.67193834 6.1428e-02 lowCoverage 1.00000 4.1506e-01 lowCoverage 0.7354468 3.5098e-01 lowCoverage 1 1.0000e+00 lowCoverage -0.0327903 5.0623e-01 insignificant 1.0000e+00 insignificant chr20 45535950 45536950 54664 ZMYND8 ENSG00000101040 0.5810139 136 5 0.4890486 71 5 0.467910 98 5 0.525397 81 5 0.549293 49 5 0.594463 153 5 0.529167 69 5 0.563023 73 5 0.7082353 72 4 0.5216117 54 5 0.594820 144 5 0.6315873 85 5 0.611855 90 5 NA 0 0 0.5764379 95 5 0.495556 33 5 0.5205128 69 5 0.614418 96 5 0.6286064 118 5 0.636709 154 5 0.433333 33 4 0.640000 29 2 0.543848 121 5 0.605882 44 4 0.620833 19 2 0.614805 121 5 0.694444 26 2 0.686667 21 3 0.5470897 93 5 0.620815 122 5 0.5763392 132 5 0.5558134 200 5 0.5522222 59 4 0.5533333 61 5 0.4943514 100 5 0.6133333 21 2 0.426190 33 2 0.5316055 142 5 0.639658 169 5 0.6533052 146 5 0.587031 103 5 0.625993 144 5 0.591097 128 5 0.6406701 0.5432317 0.4739096 0.5403269 0.5585559 0.626948 0.5944719 0.639709 0.6763606 0.5662786 0.6309932 0.6519723 0.6230055 NA 0.613732 0.5767877 0.5879665 0.6489807 0.6503297 0.639822 0.4075908 0.588119 0.579994 0.6560862 0.6275907 0.6528653 0.724840 0.6613861 0.6038588 0.646694 0.6274315 0.6043457 0.5830583 0.5082508 0.5146190 0.63102310 0.5174446 0.56979119 0.6655741 0.7057956 0.63652245 0.6462564 0.6345002 2 0.579310 0.605619 -5.0527e-03 5 0.576018 0.577515 -0.0014968 0.69237987 0.5482079 insignificant 1.00000 1.00000 insignificant 0.9019771 0.3895216 insignificant 1 1.00000 insignificant -0.02448066 0.33452427 lowCoverage 1.00000 lowCoverage 0.579310 0.5504808 0.0515452 5 0.576018 0.5322475 0.0437710 7.8630e-03 9.6767e-01 weaklyHypermeth 5.5373e-02 1.0000e+00 weaklyHypermeth 7.3443e-02 9.6490e-01 insignificant 5.5009e-01 1.0000000 insignificant 0.04200258 1.9008e-01 lowCoverage 1.0000e+00 lowCoverage 0.579310 0.6347826 -0.04660853 5 0.576018 0.623999 -0.0479807 9.7201e-01 4.4710e-02 weaklyHypometh 1.0000e+00 0.962444 insignificant 9.2376e-01 0.02874925 weaklyHypometh 1.0000000 1.00000 insignificant -0.0489083 0.02315524 lowCoverage 0.578881 lowCoverage 0.605619 0.5504808 0.0586585 5 0.577515 0.5322475 4.5268e-02 2.2661e-02 9.2310e-01 weaklyHypermeth 1.5628e-01 1.0000e+00 insignificant 1.9478e-01 0.9529089 insignificant 1.0000e+00 1.00000 insignificant 0.06648324 6.8081e-02 lowCoverage 5.8690e-01 lowCoverage 0.605619 0.6347826 -0.04536648 5 0.577515 0.623999 -0.0464840 9.6150e-01 4.9427e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant 9.6295e-01 0.23742023 insignificant 1.0000e+00 1.00000 insignificant -0.0244277 0.33057016 lowCoverage 1.00000 lowCoverage 0.5504808 0.6347826 -0.1029292 5 0.5322475 0.623999 -0.09175170 0.99768177 4.2701e-03 weaklyHypometh 1.00000 4.1457e-02 weaklyHypometh 0.9927845 1.1164e-01 insignificant 1 8.6545e-01 insignificant -0.0909109 1.5556e-02 lowCoverage 2.3965e-01 lowCoverage chr20 46875650 46876650 54718 ENSG00000212716 0.2800214 68 5 0.1815657 117 6 0.257601 93 6 0.304233 35 4 0.200000 88 6 0.240620 83 6 0.230912 172 6 0.216402 87 6 0.2046296 112 4 0.1666667 80 3 0.284766 124 6 0.1589506 84 3 0.340580 68 3 0.285714 20 3 0.2434343 103 5 0.045714 80 3 0.1928211 162 6 0.000000 23 2 0.2666667 81 5 0.208333 94 5 0.359960 63 5 0.400000 16 2 0.244975 126 3 0.152778 63 3 0.228571 11 1 0.223620 158 6 0.096667 78 3 0.125000 36 3 0.1904762 92 5 0.183992 137 6 0.1906433 157 6 0.3142256 131 6 0.3274250 109 5 0.3719426 73 2 0.3119919 149 5 0.3039216 35 3 0.421685 57 6 0.1940700 118 6 0.279451 71 4 0.2301948 78 5 0.142857 39 2 0.000000 34 2 0.354167 27 1 0.0481119 0.0269284 0.0578086 0.0783550 0.0145455 0.043979 0.0320901 0.016999 0.0200000 0.0090909 0.0542529 0.0343434 0.0588933 0.0298205 0.032562 0.0412518 0.0288666 0.0141966 0.0145455 0.015909 0.2187348 0.056808 0.032593 0.0083333 0.0898375 0.0386751 0.011818 0.0000000 0.0155844 0.018635 0.0103987 0.0957989 0.1641046 0.1578784 0.0679047 0.35044041 0.4211771 0.05183861 0.0456147 0.0307379 0.00909091 0.0127548 0.1890152 2 0.100902 0.109962 -6.9343e-03 5 0.197973 0.341211 -0.1432385 0.94241776 0.4866505 insignificant 1.00000 1.00000 insignificant 0.4244544 0.8109498 insignificant 1 1.00000 insignificant -0.01042731 0.74923428 lowCoverage 1.00000 lowCoverage 0.100902 0.2680222 -0.1569946 5 0.197973 0.4189414 -0.2209686 8.8515e-01 6.4141e-09 weaklyHypometh 1.0000e+00 2.1380e-06 weaklyHypometh 9.5781e-01 7.3848e-04 weaklyHypometh 1.0000e+00 0.1230794 insignificant -0.10635779 1.7006e-02 lowCoverage 2.1803e-01 lowCoverage 0.100902 0.1044177 -0.01784040 2 0.197973 0.209259 -0.0112865 6.1422e-01 5.3076e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 6.0156e-01 0.62668549 lowCoverage 1.0000000 1.00000 lowCoverage 0.0141477 0.83322816 lowCoverage 1.000000 lowCoverage 0.109962 0.2680222 -0.1395319 5 0.341211 0.4189414 -7.7730e-02 9.1190e-01 1.8369e-04 weaklyHypometh 1.0000e+00 3.0615e-02 weaklyHypometh 9.9384e-01 0.0055057 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.09593048 3.7340e-02 lowCoverage 4.0587e-01 lowCoverage 0.109962 0.1044177 -0.00909771 2 0.341211 0.209259 0.1319521 4.0363e-01 6.6038e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 4.2617e-01 0.39097327 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.0245750 0.72514536 lowCoverage 1.00000 lowCoverage 0.2680222 0.1044177 0.1005328 2 0.4189414 0.209259 0.20968216 0.00293702 8.2936e-01 lowCoverage 0.26700 1.0000e+00 lowCoverage 0.0191040 9.8255e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.1205055 1.2852e-01 lowCoverage 9.9629e-01 lowCoverage chr20 46883050 46884050 54720 PREX1 ENSG00000124126 0.7484483 241 8 0.6617531 244 8 0.600368 218 8 0.808387 169 8 0.656398 159 5 0.815689 353 8 0.650401 108 5 0.710469 188 7 0.6222187 140 8 0.5828568 133 8 0.716934 286 8 0.6574846 134 8 0.727965 209 8 0.717857 30 4 0.8311973 200 8 0.742298 123 5 0.5959310 143 4 0.664571 148 8 0.7429702 291 8 0.788949 225 8 0.652234 106 5 0.852727 89 8 0.785547 195 8 0.775421 133 4 0.908120 46 4 0.779034 206 8 0.679517 108 8 0.530691 50 4 0.6421601 155 8 0.769194 228 8 0.7425514 203 8 0.7431386 362 8 0.5561382 218 8 0.5708285 146 8 0.6530867 291 7 0.8361111 66 8 0.747447 133 8 0.7974134 215 8 0.775131 210 8 0.8210873 240 8 0.820753 194 8 0.766548 224 8 0.781755 224 8 0.8193410 0.7078847 0.6467587 0.8635297 0.6806559 0.871822 0.7154576 0.738506 0.7359197 0.6421350 0.7265224 0.6747051 0.7838540 0.7497674 0.810819 0.6997927 0.7444024 0.8441500 0.7726572 0.834941 0.7619447 0.840537 0.863700 0.7929912 0.9124940 0.8367132 0.769640 0.6916412 0.7921946 0.817128 0.7670323 0.8074869 0.7647312 0.5610115 0.7502926 0.86806429 0.8165044 0.72419778 0.8465108 0.8875393 0.87373905 0.8612737 0.8294440 4 0.752004 0.796385 -4.1750e-02 8 0.556925 0.678447 -0.1215223 0.98093984 0.1167434 insignificant 1.00000 1.00000 insignificant 0.9845573 0.1412341 insignificant 1 1.00000 insignificant -0.03620393 0.29451984 insignificant 1.00000 insignificant 0.752004 0.7240412 0.0167347 8 0.556925 0.6930538 -0.1361288 6.5265e-01 8.8161e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7384e-01 7.2858e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.00865320 8.7063e-01 insignificant 1.0000e+00 insignificant 0.752475 0.8489011 -0.09950476 8 0.570002 0.788010 -0.2180076 9.9802e-01 1.0746e-02 weaklyHypometh 1.0000e+00 0.430700 insignificant 9.9667e-01 0.03235134 weaklyHypometh 1.0000000 1.00000 insignificant -0.0908974 0.00024840 weaklyHypometh 0.041400 weaklyHypometh 0.796385 0.7240412 0.0573923 8 0.678447 0.6930538 -1.4606e-02 5.7057e-02 8.6622e-01 insignificant 3.5219e-01 1.0000e+00 insignificant 4.7525e-01 0.9272934 insignificant 1.0000e+00 1.00000 insignificant 0.04485714 4.4622e-01 insignificant 1.0000e+00 insignificant 0.796168 0.8489011 -0.05608401 8 0.651651 0.788010 -0.1363584 9.9854e-01 5.9476e-02 insignificant 1.0000e+00 1.0000000 insignificant 9.8497e-01 0.08407104 insignificant 1.0000e+00 1.00000 insignificant -0.0546935 0.10264633 insignificant 1.00000 insignificant 0.7258216 0.8489011 -0.1111363 8 0.7299749 0.788010 -0.05803470 0.99943498 1.3647e-02 weaklyHypometh 1.00000 1.1468e-01 insignificant 0.9864331 2.0914e-01 insignificant 1 1.0000e+00 insignificant -0.0995506 9.4874e-02 insignificant 8.1415e-01 insignificant chr20 47394950 47395950 54752 SNORD12 ENSG00000212304 0.7884739 191 11 0.7600562 521 11 0.633194 294 8 0.936730 117 10 0.910072 206 6 0.832233 205 11 0.824444 352 6 0.862211 256 11 0.8283167 215 8 0.8943699 186 8 0.880317 584 11 0.7622849 175 5 0.932919 312 8 NA 0 0 0.8441452 228 5 0.757567 178 5 0.9036025 172 5 0.675544 127 10 0.9106666 309 11 0.906320 225 9 0.912907 174 11 0.875842 34 3 0.891518 139 11 0.870176 110 11 0.742857 33 3 0.897972 487 11 0.685142 134 8 0.737807 38 3 0.8786712 235 11 0.924080 481 11 0.8940783 482 11 0.8896567 285 11 0.0061754 447 11 0.0334131 265 11 0.0414929 470 11 0.0000000 53 3 0.019814 230 11 0.0049495 484 11 0.862874 137 8 0.7884057 307 11 0.910174 152 6 0.820000 49 3 0.747683 179 6 0.7465953 0.7069575 0.5921149 0.9240282 0.8261635 0.766096 0.7685116 0.812043 0.8079459 0.8513409 0.8634645 0.7193972 0.9056088 NA 0.862250 0.7180059 0.8890741 0.7199287 0.9076772 0.890880 0.9145698 0.884735 0.877064 0.8475016 0.7553288 0.8738876 0.766976 0.7377897 0.8466589 0.881715 0.8584085 0.8626081 0.0070820 0.0354674 0.0626183 0.00000000 0.0195178 0.00437811 0.7944563 0.8027004 0.89071092 0.8052239 0.7976574 0 0.854111 0.889016 -3.8562e-02 11 0.847641 0.890810 -0.0431686 0.99587382 0.0025411 weaklyHypometh 1.00000 0.31764 insignificant 0.9239265 0.1654882 insignificant 1 1.00000 insignificant -0.01619241 0.59813552 insignificant 1.00000 insignificant 0.854111 0.0256542 0.8276934 11 0.847641 0.0221315 0.8255094 2.5906e-134 1.0000e+00 hypermethylated 2.5906e-131 1.0000e+00 hypermethylated 5.1891e-28 1.0000e+00 hypermethylated 5.1891e-25 1.0000000 hypermethylated 0.81622585 1.7838e-21 hypermethylated 8.9190e-19 hypermethylated 0.854111 0.7536408 0.07003440 8 0.847641 0.812203 0.0354384 9.7165e-03 7.0657e-01 weaklyHypermeth 2.0243e-01 1.000000 insignificant 5.5603e-01 0.07392675 insignificant 1.0000000 1.00000 insignificant 0.0080394 0.82130273 insignificant 1.000000 insignificant 0.889016 0.0256542 0.8662811 11 0.890810 0.0221315 8.6868e-01 6.8959e-122 1.0000e+00 hypermethylated 6.8959e-119 1.0000e+00 hypermethylated 1.5517e-23 1.0000000 hypermethylated 3.8791e-21 1.00000 hypermethylated 0.83241826 4.7223e-14 hypermethylated 4.7223e-11 hypermethylated 0.889016 0.7536408 0.14806977 8 0.890810 0.812203 0.0786070 1.2360e-06 6.9987e-01 weaklyHypermeth 1.1236e-04 1.0000000 weaklyHypermeth 2.5838e-02 0.26511000 weaklyHypermeth 5.2451e-01 1.00000 insignificant 0.0242318 0.52255041 insignificant 1.00000 insignificant 0.0256542 0.7536408 -0.7306883 8 0.0221315 0.812203 -0.79007104 1.00000000 1.9924e-62 hypomethylated 1.00000 1.9924e-59 hypomethylated 1.0000000 3.9841e-16 hypomethylated 1 1.9921e-13 hypomethylated -0.8081865 3.5084e-06 hypomethylated 1.1575e-03 hypomethylated chr20 47430750 47431750 54753 SNORD12 ENSG00000212304 0.7287854 166 6 0.7408084 160 6 0.597306 78 6 0.784850 137 6 0.731838 67 5 0.677547 378 6 0.732048 90 4 0.592992 131 6 0.6714286 70 4 0.7155388 91 5 0.741576 183 6 0.7698413 67 3 0.605518 110 6 0.803819 40 4 0.6844308 111 6 0.731973 63 5 0.5777778 28 3 0.698578 147 6 0.8082185 138 6 0.775205 306 6 0.792159 65 5 0.856854 141 4 0.714441 113 6 0.790654 134 5 0.845130 108 6 0.702920 213 6 0.654228 176 5 0.615239 99 4 0.8073326 101 6 0.720280 200 6 0.6738745 158 6 0.7629220 337 6 0.6139731 117 6 0.5906042 69 6 0.6957270 203 6 0.8520833 73 3 0.823503 107 6 0.6840615 167 6 0.639979 128 6 0.8171958 159 6 0.825794 140 6 0.793516 130 6 0.868709 170 6 0.7715690 0.7690082 0.7137916 0.8140804 0.7753617 0.830569 0.8172187 0.791773 0.7094868 0.7810089 0.7492761 0.7740411 0.8214901 0.8330384 0.762895 0.7431907 0.5130999 0.7484220 0.8346328 0.825006 0.8140049 0.848311 0.761515 0.8742112 0.8197929 0.7571037 0.784804 0.7794856 0.8642346 0.826166 0.7399591 0.7916859 0.7255001 0.5985069 0.7752260 0.80131323 0.8610255 0.64678796 0.8088788 0.8632821 0.88396331 0.8241435 0.8871597 3 0.782116 0.792954 -4.7546e-03 6 0.710043 0.766523 -0.0564801 0.35094292 0.2359316 insignificant 1.00000 1.00000 insignificant 0.7671411 0.0271533 weaklyHypometh 1 1.00000 insignificant -0.03616562 0.19612802 insignificant 1.00000 insignificant 0.782915 0.7269022 0.0547560 6 0.735791 0.6847853 0.0510055 1.8233e-02 9.9402e-01 weaklyHypermeth 1.2075e-01 1.0000e+00 insignificant 3.9202e-01 8.9149e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.00148803 9.7545e-01 insignificant 1.0000e+00 insignificant 0.782915 0.8500688 -0.06353269 6 0.735791 0.797333 -0.0615417 9.9819e-01 3.5121e-03 weaklyHypometh 1.0000e+00 0.234828 insignificant 9.9967e-01 0.00202035 weaklyHypometh 1.0000000 0.31959 insignificant -0.0805348 0.11092662 insignificant 1.000000 insignificant 0.792617 0.7269022 0.0590496 6 0.727610 0.6847853 4.2825e-02 2.6527e-02 9.6339e-01 weaklyHypermeth 1.8169e-01 1.0000e+00 insignificant 3.8417e-02 0.8949611 weaklyHypermeth 3.0013e-01 1.00000 insignificant 0.03467759 5.0026e-01 insignificant 1.0000e+00 insignificant 0.792617 0.8500688 -0.05980254 6 0.727610 0.797333 -0.0697223 9.9866e-01 4.7586e-03 weaklyHypometh 1.0000e+00 0.4325986 insignificant 9.8508e-01 0.08348002 insignificant 1.0000e+00 1.00000 insignificant -0.0443692 0.35840568 insignificant 1.00000 insignificant 0.7269022 0.8500688 -0.1191888 6 0.6847853 0.797333 -0.11254723 0.99972854 9.6058e-04 weaklyHypometh 1.00000 1.2159e-02 weaklyHypometh 0.9984120 1.9073e-03 weaklyHypometh 1 3.9735e-02 weaklyHypometh -0.0790467 2.1133e-01 insignificant 1.0000e+00 insignificant chr20 47611550 47612550 54756 KCNB1 ENSG00000158445 0.5699103 134 6 0.6578712 123 6 0.399370 124 6 0.569293 118 6 0.512471 96 6 0.504992 176 5 0.572185 79 6 0.602984 156 6 0.4533784 105 6 0.6117811 58 5 0.609758 126 6 0.4696970 50 4 0.504894 163 5 0.480159 24 2 0.5438272 98 5 0.452381 52 2 0.2644110 38 4 0.477490 224 5 0.7041889 73 5 0.548793 140 6 0.720629 59 4 0.605079 131 6 0.570597 98 6 0.528584 77 5 0.427582 265 6 0.591694 205 6 0.542724 175 6 0.393330 75 5 0.7175579 160 5 0.610663 198 6 0.5994068 230 6 0.5378422 208 5 0.0157531 240 6 0.0104167 136 6 0.0350877 120 3 0.1571429 114 6 0.118882 160 6 0.1133393 195 6 0.533075 156 6 0.6737807 166 6 0.588677 102 6 0.407633 151 5 0.548554 190 6 0.5945547 0.6187713 0.4700124 0.5993063 0.4832282 0.640117 0.5405465 0.561616 0.4204754 0.5350192 0.5940779 0.4042129 0.5115370 0.4138599 0.475279 0.3710944 0.2947535 0.3637925 0.6321428 0.540352 0.7245153 0.524128 0.682339 0.5166702 0.4170370 0.6069589 0.446135 0.3556889 0.6694144 0.616858 0.5977092 0.6365863 0.0233229 0.0063516 0.0541590 0.18466899 0.0836775 0.09882541 0.6743582 0.5605390 0.47997548 0.3971326 0.4854513 3 0.507421 0.553961 -4.6156e-02 6 0.534951 0.544171 -0.0092201 0.74730858 0.1298040 insignificant 1.00000 1.00000 insignificant 0.8958986 0.1982003 insignificant 1 1.00000 insignificant -0.04498233 0.21742299 insignificant 1.00000 insignificant 0.507421 0.0880829 0.4406692 6 0.534951 0.1317252 0.4032258 2.2491e-27 9.9999e-01 hypermethylated 1.1083e-25 1.0000e+00 hypermethylated 3.0683e-13 1.0000e+00 hypermethylated 2.0455e-11 1.0000000 hypermethylated 0.45038809 4.5924e-09 hypermethylated 2.3488e-07 hypermethylated 0.507657 0.5856209 -0.03557342 6 0.597451 0.498397 0.0990541 9.1702e-01 8.2983e-02 insignificant 1.0000e+00 1.000000 insignificant 7.7244e-01 0.23249164 insignificant 1.0000000 1.00000 insignificant -0.0248522 0.62539318 insignificant 1.000000 insignificant 0.553961 0.0880829 0.4788508 6 0.544171 0.1317252 4.1245e-01 1.6948e-26 1.0000e+00 hypermethylated 8.0705e-25 1.0000e+00 hypermethylated 6.6741e-12 1.0000000 hypermethylated 5.1339e-10 1.00000 hypermethylated 0.49537042 1.7171e-09 hypermethylated 1.4309e-07 hypermethylated 0.553723 0.5863874 0.01095232 6 0.479053 0.569597 -0.0905438 5.7756e-01 1.8511e-01 insignificant 1.0000e+00 1.0000000 insignificant 4.1338e-01 0.40129328 insignificant 1.0000e+00 1.00000 insignificant 0.0201301 0.70673682 insignificant 1.00000 insignificant 0.0862786 0.5863874 -0.4696141 6 0.0553050 0.569597 -0.51429155 0.99999974 2.9081e-18 hypomethylated 1.00000 1.8176e-16 hypomethylated 1.0000000 8.1424e-09 hypomethylated 1 7.4022e-07 hypomethylated -0.4752403 4.3510e-05 hypomethylated 2.9910e-03 hypomethylated chr20 47747650 47748650 54782 PTGIS ENSG00000124212 0.7270774 278 8 0.6092154 244 9 0.668720 124 9 0.717811 285 8 0.758640 182 9 0.688604 316 8 0.562959 189 9 0.776492 192 8 0.6025682 183 8 0.5784998 191 9 0.687825 306 9 0.5279489 125 6 0.767976 289 8 0.758160 116 8 0.7771574 256 9 0.662007 170 6 0.7076211 66 6 0.649921 234 8 0.7336490 209 7 0.721884 264 8 0.788630 82 8 0.812286 154 8 0.691839 196 8 0.683131 117 8 0.739354 67 7 0.685700 282 8 0.592063 82 5 0.592663 88 6 0.7820755 217 8 0.748498 276 8 0.7815815 212 8 0.7252488 385 8 0.6686408 228 8 0.6131540 152 8 0.6604167 141 6 0.5711580 41 5 0.609052 130 9 0.7533289 241 8 0.803131 203 8 0.7336303 249 8 0.768298 217 8 0.465866 226 5 0.815623 188 6 0.7236355 0.6713907 0.6100824 0.7159379 0.7138261 0.726548 0.6542368 0.764879 0.6945091 0.7025311 0.6755772 0.5601830 0.7856042 0.7545842 0.732544 0.6569968 0.5934698 0.7149058 0.7439081 0.831065 0.7318179 0.757450 0.737780 0.8359670 0.7123727 0.7358785 0.689775 0.7603474 0.7855337 0.796594 0.7700386 0.7530264 0.6467892 0.6662320 0.7955375 0.62197402 0.7416008 0.76387124 0.7630914 0.7211263 0.76804290 0.6673415 0.7900142 5 0.697322 0.779425 -4.0343e-02 8 0.654674 0.690193 -0.0355195 0.91681752 0.0029565 weaklyHypometh 1.00000 0.32850 insignificant 0.9927279 0.0530997 insignificant 1 1.00000 insignificant -0.03435248 0.21303301 insignificant 1.00000 insignificant 0.697322 0.7470525 -0.0114007 8 0.654674 0.5985843 0.0560894 4.1805e-01 5.6962e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.4514e-01 9.1667e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.03827841 2.4559e-01 insignificant 1.0000e+00 insignificant 0.697674 0.6962142 -0.03256946 8 0.680141 0.777543 -0.0974021 6.1646e-01 2.5090e-03 weaklyHypometh 1.0000e+00 0.234828 insignificant 7.1265e-01 0.00407381 weaklyHypometh 1.0000000 0.40606 insignificant -0.0330729 0.64257926 insignificant 1.000000 insignificant 0.779425 0.7470525 0.0280623 8 0.690193 0.5985843 9.1609e-02 1.2146e-02 8.7780e-01 weaklyHypermeth 8.8017e-02 1.0000e+00 weaklyHypermeth 1.3320e-02 0.9912852 weaklyHypermeth 1.2221e-01 1.00000 insignificant 0.07263089 5.1476e-02 insignificant 5.0467e-01 insignificant 0.779685 0.6962142 0.01540272 8 0.709213 0.777543 -0.0683307 2.1998e-01 2.2409e-01 insignificant 1.0000e+00 1.0000000 insignificant 4.9055e-01 0.17450159 insignificant 1.0000e+00 1.00000 insignificant 0.0012796 0.98568845 insignificant 1.00000 insignificant 0.7478541 0.6962142 -0.0179526 8 0.6584428 0.777543 -0.11910052 0.67970982 5.6805e-02 insignificant 1.00000 3.8643e-01 insignificant 0.9598783 2.9780e-02 weaklyHypometh 1 2.9642e-01 insignificant -0.0713513 3.4927e-01 insignificant 1.0000e+00 insignificant chr20 47754150 47755150 54785 PTGIS ENSG00000124212 0.8575362 650 19 0.8786947 357 16 0.625863 327 16 0.856921 568 19 0.902395 212 12 0.771268 725 19 0.721672 213 12 0.807516 227 12 0.7919627 196 12 0.8355357 172 9 0.837415 565 20 0.8278307 154 9 0.834669 229 12 0.937255 82 5 0.8150798 292 18 0.700490 113 10 0.7960792 889 7 0.774213 565 19 0.8071630 318 18 0.839082 561 20 0.850096 136 10 0.924085 206 16 0.862484 340 20 0.797333 150 10 0.863724 146 12 0.849315 492 18 0.794233 241 12 0.938957 105 9 0.8744367 239 14 0.790629 460 18 0.8182104 439 18 0.8502940 761 19 0.7044962 252 13 0.8073226 227 14 0.7919313 382 19 0.8730769 111 11 0.893186 209 12 0.7916557 524 19 0.880220 596 19 0.8926854 663 19 0.860564 618 19 0.903900 516 19 0.866756 625 19 0.8726204 0.8454389 0.8126052 0.9122888 0.8900402 0.851895 0.7700467 0.881978 0.8222827 0.8945204 0.8422004 0.8755258 0.8578092 0.8995433 0.870275 0.8766521 0.8762145 0.8316962 0.8108300 0.909784 0.9218860 0.906710 0.880867 0.8676052 0.8495362 0.8708423 0.829605 0.9377689 0.8741518 0.897836 0.8899196 0.8646316 0.7921563 0.8514522 0.8179394 0.72490684 0.8786808 0.84120195 0.9246108 0.8982621 0.92060025 0.9054680 0.8783211 6 0.856372 0.870794 -1.9137e-02 18 0.827758 0.845876 -0.0181179 0.98177224 0.0711764 insignificant 1.00000 1.00000 insignificant 0.9881445 0.0270800 weaklyHypometh 1 1.00000 insignificant -0.04021763 0.06354030 insignificant 1.00000 insignificant 0.856314 0.8246334 0.0298021 18 0.819556 0.8026022 0.0169539 8.3525e-06 8.9748e-01 weaklyHypermeth 9.7122e-05 1.0000e+00 weaklyHypermeth 6.4564e-03 8.8077e-01 weaklyHypermeth 6.7962e-02 1.0000000 weaklyHypermeth 0.00065391 9.8401e-01 insignificant 1.0000e+00 insignificant 0.856314 0.9032472 -0.03940802 18 0.819556 0.846380 -0.0268244 9.9204e-01 2.2120e-04 weaklyHypometh 1.0000e+00 0.036867 weaklyHypometh 9.7938e-01 0.00586758 weaklyHypometh 1.0000000 0.45135 insignificant -0.0698930 0.00063022 weaklyHypometh 0.052762 weaklyHypometh 0.870724 0.8246334 0.0484532 18 0.838537 0.8026022 3.5935e-02 6.2706e-08 9.9780e-01 weaklyHypermeth 9.3591e-07 1.0000e+00 weaklyHypermeth 3.0839e-04 0.9974657 weaklyHypermeth 5.4104e-03 1.00000 weaklyHypermeth 0.04087155 2.2212e-01 insignificant 1.0000e+00 insignificant 0.870724 0.9032472 -0.02062453 18 0.838537 0.846380 -0.0078437 9.7667e-01 1.8205e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant 7.8689e-01 0.44764058 insignificant 1.0000e+00 1.00000 insignificant -0.0296754 0.08100377 insignificant 1.00000 insignificant 0.8246334 0.9032472 -0.0680011 18 0.8026022 0.846380 -0.04377827 0.99999976 1.4412e-09 weaklyHypometh 1.00000 4.8524e-08 weaklyHypometh 0.9994529 1.0584e-03 weaklyHypometh 1 2.4476e-02 weaklyHypometh -0.0705469 5.0117e-02 insignificant 5.0993e-01 insignificant chr20 47799150 47800150 54791 ENSG00000217373 0.6844266 180 7 0.6570842 123 7 0.703401 36 4 0.675108 140 7 0.732143 51 7 0.656324 90 6 0.624625 62 4 0.675850 77 6 0.6675325 54 7 0.8030303 55 4 0.717992 137 7 0.7492063 27 4 0.637049 84 7 0.740476 69 7 0.7990930 58 7 0.607143 19 1 0.8250000 41 1 0.696912 239 6 0.6904762 39 6 0.645833 41 6 0.880952 27 3 1.000000 13 0 0.626025 85 7 0.686756 49 6 0.757480 112 6 0.702433 62 5 0.619048 46 6 0.822917 24 2 0.6453500 107 7 0.657911 111 7 0.6366541 89 7 0.8010204 58 6 0.6662533 112 7 0.5526316 87 6 0.6925170 88 7 0.3571429 16 0 0.664399 85 7 0.8081633 68 7 0.771724 111 7 0.8302930 119 7 0.705193 160 7 0.701028 118 4 0.682453 105 7 0.7153547 0.6875870 0.7480078 0.6978046 0.7691327 0.650252 0.6416797 0.716254 0.6923933 0.8113791 0.7392851 0.7049887 0.6727977 0.7467687 0.813638 0.6484309 0.7794076 0.7313833 0.7091837 0.755102 0.8758503 1.000000 0.684054 0.6354470 0.7445917 0.7357031 0.578960 0.8214286 0.7115167 0.692014 0.6448040 0.8153547 0.6647307 0.5919262 0.6935374 0.43877551 0.6803045 0.80845481 0.7298135 0.8212297 0.74304116 0.7426368 0.7080930 0 0.724414 0.719029 5.9290e-03 6 0.618424 0.740422 -0.1219984 0.42583748 0.7821282 insignificant 1.00000 1.00000 insignificant 0.6223515 0.3352232 insignificant 1 1.00000 insignificant -0.03694353 0.33414469 insignificant 1.00000 insignificant 0.724861 0.6732456 0.0608849 7 0.706770 0.6594745 0.0472958 1.6565e-03 9.6991e-01 weaklyHypermeth 1.3044e-02 1.0000e+00 weaklyHypermeth 1.8836e-03 9.9681e-01 weaklyHypermeth 2.2971e-02 1.0000000 weaklyHypermeth 0.07591749 2.8609e-01 insignificant 1.0000e+00 insignificant 0.724414 0.7614379 -0.02217544 7 0.618424 0.759455 -0.1410312 9.6675e-01 5.0493e-01 insignificant 1.0000e+00 1.000000 insignificant 7.8200e-01 0.69706177 insignificant 1.0000000 1.00000 insignificant -0.0387028 0.25334647 insignificant 1.000000 insignificant 0.717949 0.6732456 0.0461143 6 0.703340 0.6594745 4.3865e-02 6.1079e-02 8.9091e-01 insignificant 3.7243e-01 1.0000e+00 insignificant 1.2785e-02 0.9976078 weaklyHypermeth 1.1838e-01 1.00000 insignificant 0.11286102 1.5315e-01 insignificant 1.0000e+00 insignificant 0.719029 0.7614379 -0.03097671 6 0.740422 0.759455 -0.0190328 9.6920e-01 4.0247e-01 insignificant 1.0000e+00 1.0000000 insignificant 8.5344e-01 0.81710952 insignificant 1.0000e+00 1.00000 insignificant -0.0017593 0.96874233 insignificant 1.00000 insignificant 0.6732456 0.7610475 -0.0831724 7 0.6594745 0.725092 -0.06561719 0.98534221 2.0255e-03 weaklyHypometh 1.00000 2.3553e-02 weaklyHypometh 0.9970093 6.5063e-03 weaklyHypometh 1 9.2947e-02 weaklyHypometh -0.1146203 1.3988e-01 insignificant 1.0000e+00 insignificant chr20 47822950 47823950 54796 ENSG00000217373 0.6157649 187 8 0.5991650 142 8 0.601454 98 8 0.697752 167 8 0.690341 50 6 0.583439 209 8 0.583827 85 5 0.636793 118 8 0.6052137 93 8 0.6488095 68 8 0.634783 203 8 0.5213508 48 3 0.572551 135 8 0.850000 28 2 0.6569526 110 8 0.510417 36 2 0.6555962 55 3 0.653227 133 9 0.7769608 91 5 0.660308 194 8 0.693750 44 3 0.771635 49 3 0.657541 103 8 0.705556 51 6 0.539232 75 5 0.597489 95 6 0.770370 66 6 0.799679 26 1 0.6643051 125 8 0.699396 116 6 0.5651608 133 6 0.5789956 229 8 0.5142262 153 8 0.6778274 84 5 0.4978170 147 8 0.4305556 30 3 0.453343 70 5 0.5709860 139 6 0.599813 164 8 0.6504218 162 8 0.739489 139 8 0.743394 109 5 0.603679 140 8 0.5044674 0.4835697 0.4747410 0.5807957 0.5210438 0.523759 0.4548481 0.505903 0.4828732 0.4866169 0.4684552 0.3704473 0.4833748 0.5271478 0.529414 0.3801743 0.4601064 0.5486692 0.6197937 0.558840 0.5418301 0.494972 0.566242 0.6659405 0.3828056 0.4887740 0.557734 0.6429529 0.4584074 0.572688 0.5132421 0.4470454 0.3772798 0.4705104 0.3435876 0.37266464 0.4143324 0.43977822 0.5113318 0.5309933 0.72009309 0.4994635 0.5072404 2 0.568697 0.558453 -3.7161e-03 8 0.606391 0.629888 -0.0234966 0.82950012 0.2180691 insignificant 1.00000 1.00000 insignificant 0.9381072 0.0342750 weaklyHypometh 1 1.00000 insignificant -0.03252383 0.29698475 insignificant 1.00000 insignificant 0.569830 0.4751204 0.0853365 8 0.668891 0.4920795 0.1768119 4.3986e-05 9.9997e-01 weaklyHypermeth 4.7296e-04 1.0000e+00 weaklyHypermeth 5.2166e-04 9.9912e-01 weaklyHypermeth 7.7860e-03 1.0000000 weaklyHypermeth 0.11360944 2.5141e-02 weaklyHypermeth 2.9233e-01 insignificant 0.569637 0.5980392 -0.01871834 8 0.627503 0.641212 -0.0137093 9.1687e-01 4.8648e-01 insignificant 1.0000e+00 1.000000 insignificant 9.9435e-01 0.12767539 insignificant 1.0000000 1.00000 insignificant -0.0296240 0.43969069 insignificant 1.000000 insignificant 0.558559 0.4758842 0.0926555 8 0.646124 0.5535894 9.2535e-02 6.3777e-05 9.9989e-01 weaklyHypermeth 7.0085e-04 1.0000e+00 weaklyHypermeth 3.9241e-05 0.9997920 weaklyHypermeth 9.8101e-04 1.00000 weaklyHypermeth 0.14613327 8.3648e-03 weaklyHypermeth 1.3277e-01 insignificant 0.558559 0.5980392 -0.01744484 8 0.646124 0.641212 0.0049118 5.5441e-01 6.7946e-01 insignificant 1.0000e+00 1.0000000 insignificant 6.0453e-01 0.77848737 insignificant 1.0000e+00 1.00000 insignificant 0.0028998 0.94399133 insignificant 1.00000 insignificant 0.4758842 0.5980392 -0.1037350 8 0.5535894 0.641212 -0.08762272 0.99852057 4.4539e-03 weaklyHypometh 1.00000 4.2418e-02 weaklyHypometh 0.9969472 5.3919e-03 weaklyHypometh 1 8.2953e-02 weaklyHypometh -0.1432335 1.5965e-02 weaklyHypometh 2.3965e-01 insignificant chr20 48078150 48079150 54817 SNAI1 ENSG00000124216 0.8753669 314 8 0.7101395 169 8 0.651110 105 8 0.880992 214 8 0.807540 65 6 0.838447 249 7 0.781853 85 8 0.766291 172 8 0.8583754 91 8 0.7911573 74 8 0.816745 254 8 0.8191964 56 6 0.866747 141 8 0.703151 50 5 0.8912037 99 8 0.796474 49 3 0.7361111 39 5 0.735958 229 8 0.7540715 160 8 0.859787 261 8 0.764773 53 4 0.877902 78 8 0.800476 160 8 0.824036 40 4 0.768750 50 5 0.769998 178 8 0.855573 98 7 0.811012 50 4 0.8463323 152 8 0.825177 181 8 0.8346026 165 8 0.8064028 269 8 0.6850737 132 7 0.7356379 123 8 0.7894841 202 8 0.8458333 33 4 0.746104 100 5 0.8214478 188 8 0.832979 245 8 0.8385178 307 8 0.839253 165 7 0.844379 188 8 0.828802 204 8 0.8787641 0.7865886 0.7071693 0.8589999 0.8705049 0.842585 0.8317088 0.805013 0.8553805 0.7520991 0.8565485 0.8585755 0.8826997 0.8101096 0.933250 0.8820803 0.7669148 0.8295039 0.8081188 0.900033 0.8352851 0.857610 0.840483 0.7971915 0.8280603 0.8372032 0.815954 0.7925074 0.8541202 0.861159 0.8429557 0.8348094 0.8453403 0.7053044 0.8269079 0.81694915 0.7771363 0.83733146 0.8907940 0.8539518 0.88627842 0.8892319 0.8729522 3 0.826802 0.841927 -1.9968e-03 8 0.804681 0.811505 -0.0068239 0.65011186 0.5945974 insignificant 1.00000 1.00000 insignificant 0.4407682 0.3397884 insignificant 1 1.00000 insignificant -0.01838364 0.32118084 insignificant 1.00000 insignificant 0.826843 0.8174807 0.0241409 8 0.816283 0.6617658 0.1545175 1.2112e-02 5.0529e-01 weaklyHypermeth 8.2957e-02 1.0000e+00 weaklyHypermeth 1.2836e-01 4.2024e-01 insignificant 8.4445e-01 1.0000000 insignificant 0.02643912 3.7844e-01 insignificant 1.0000e+00 insignificant 0.826802 0.8665464 -0.03790215 8 0.804681 0.842348 -0.0376671 9.5534e-01 1.1198e-02 weaklyHypometh 1.0000e+00 0.430700 insignificant 8.9177e-01 0.03528573 weaklyHypometh 1.0000000 1.00000 insignificant -0.0397504 0.01674538 weaklyHypometh 0.557750 insignificant 0.841927 0.8193548 0.0217256 8 0.811505 0.7849279 2.6577e-02 6.8508e-02 2.7574e-01 insignificant 4.1270e-01 1.0000e+00 insignificant 3.9650e-01 0.4957239 insignificant 1.0000e+00 1.00000 insignificant 0.04482276 1.3449e-01 insignificant 9.8165e-01 insignificant 0.841927 0.8665464 -0.03196029 8 0.811505 0.842348 -0.0308432 9.6638e-01 7.3416e-02 insignificant 1.0000e+00 1.0000000 insignificant 9.6012e-01 0.09718813 insignificant 1.0000e+00 1.00000 insignificant -0.0213668 0.06816952 insignificant 1.00000 insignificant 0.8193548 0.8665464 -0.0518075 8 0.7849279 0.842348 -0.05742027 0.19402448 1.3283e-02 weaklyHypometh 1.00000 1.1344e-01 insignificant 0.5200953 1.1555e-01 insignificant 1 8.7537e-01 insignificant -0.0661895 4.1459e-02 weaklyHypometh 4.6065e-01 insignificant chr20 48136250 48137250 54824 TMEM189-UBE2V1 ENSG00000124208 0.8242265 249 9 0.6665641 179 6 0.582558 175 6 0.723264 180 8 0.799603 91 6 0.712362 246 8 0.515496 120 6 0.676489 128 6 0.6997445 95 6 0.7395229 122 6 0.747153 228 6 0.6732822 66 6 0.759963 132 6 0.891369 22 3 0.6138172 140 6 0.798661 50 6 0.6909472 625 6 0.593615 192 10 0.6826797 139 6 0.825403 254 8 0.646776 69 6 0.710091 60 4 0.708314 180 8 0.561813 87 6 0.597734 45 4 0.705913 248 8 0.692895 91 6 0.492824 63 4 0.8662202 75 4 0.612732 218 8 0.7789011 196 8 0.8263423 348 8 0.6155161 118 6 0.7991071 101 6 0.5580087 90 5 0.5390720 38 4 0.678993 139 6 0.6427568 253 8 0.846251 242 8 0.8610935 220 8 0.857697 243 8 0.784521 196 6 0.760191 221 9 0.8323140 0.5722671 0.6028505 0.8391082 0.8268845 0.821027 0.6813408 0.735825 0.7122758 0.7401735 0.8183012 0.7947526 0.7884411 0.7773610 0.771713 0.7339846 0.7523819 0.7525722 0.7520883 0.757222 0.6859545 0.812513 0.764874 0.6460799 0.6802376 0.7541011 0.698210 0.7023365 0.7899317 0.792458 0.8236615 0.7574146 0.6073130 0.7385223 0.7575622 0.49435766 0.7518658 0.62880992 0.8837578 0.8499695 0.85510492 0.8344670 0.8028049 4 0.745550 0.745823 3.8834e-03 8 0.708982 0.754960 -0.0459773 0.83102655 0.7935440 insignificant 1.00000 1.00000 insignificant 0.7797703 0.9406329 insignificant 1 1.00000 insignificant 0.02745640 0.47298198 insignificant 1.00000 insignificant 0.745658 0.6765900 0.0762358 6 0.694619 0.6624617 0.0321576 6.6912e-03 9.8149e-01 weaklyHypermeth 4.7794e-02 1.0000e+00 weaklyHypermeth 9.3400e-02 9.9713e-01 insignificant 6.6241e-01 1.0000000 insignificant 0.07192691 1.3743e-01 insignificant 1.0000e+00 insignificant 0.746181 0.8385370 -0.09687897 8 0.658905 0.825513 -0.1666080 1.0000e+00 8.1816e-05 weaklyHypometh 1.0000e+00 0.020454 weaklyHypometh 9.9999e-01 0.00201836 weaklyHypometh 1.0000000 0.31959 insignificant -0.1111147 0.00219545 weaklyHypometh 0.115550 insignificant 0.745368 0.6765900 0.0734704 6 0.719954 0.6624617 5.7492e-02 4.9555e-02 9.9710e-01 weaklyHypermeth 3.1364e-01 1.0000e+00 insignificant 1.6023e-01 0.9986941 insignificant 1.0000e+00 1.00000 insignificant 0.04447051 3.8831e-01 insignificant 1.0000e+00 insignificant 0.744591 0.8383929 -0.10456598 8 0.708027 0.812091 -0.1040637 9.9999e-01 8.5385e-06 weaklyHypometh 1.0000e+00 0.0028462 weaklyHypometh 9.9998e-01 0.00043050 weaklyHypometh 1.0000e+00 0.21525 insignificant -0.1385711 0.00222555 weaklyHypometh 0.21396 insignificant 0.6753070 0.8381038 -0.1776958 6 0.6339831 0.796432 -0.16244868 1.00000000 4.0957e-04 weaklyHypometh 1.00000 5.7686e-03 weaklyHypometh 1.0000000 7.7622e-03 weaklyHypometh 1 1.0489e-01 insignificant -0.1830416 3.4684e-03 weaklyHypometh 7.5401e-02 weaklyHypometh chr20 48136350 48137350 54825 TMEM189-UBE2V1 ENSG00000124208 0.8242265 249 9 0.6665641 179 6 0.582558 175 6 0.723264 180 8 0.799603 91 6 0.712362 246 8 0.515496 120 6 0.676489 128 6 0.6997445 95 6 0.7395229 122 6 0.747153 228 6 0.6732822 66 6 0.759963 132 6 0.891369 22 3 0.6138172 140 6 0.798661 50 6 0.6909472 625 6 0.593615 192 10 0.6826797 139 6 0.825403 254 8 0.646776 69 6 0.710091 60 4 0.708314 180 8 0.561813 87 6 0.597734 45 4 0.705913 248 8 0.692895 91 6 0.492824 63 4 0.8662202 75 4 0.612732 218 8 0.7789011 196 8 0.8263423 348 8 0.6155161 118 6 0.7991071 101 6 0.5580087 90 5 0.5390720 38 4 0.678993 139 6 0.6427568 253 8 0.846251 242 8 0.8610935 220 8 0.857697 243 8 0.784521 196 6 0.760191 221 9 0.8323140 0.5722671 0.6028505 0.8391082 0.8268845 0.821027 0.6813408 0.735825 0.7122758 0.7401735 0.8183012 0.7947526 0.7884411 0.7773610 0.771713 0.7339846 0.7523819 0.7525722 0.7520883 0.757222 0.6859545 0.812513 0.764874 0.6460799 0.6802376 0.7541011 0.698210 0.7023365 0.7899317 0.792458 0.8236615 0.7574146 0.6073130 0.7385223 0.7575622 0.49435766 0.7518658 0.62880992 0.8837578 0.8499695 0.85510492 0.8344670 0.8028049 4 0.745550 0.745823 3.8834e-03 8 0.708982 0.754960 -0.0459773 0.83102655 0.7935440 insignificant 1.00000 1.00000 insignificant 0.7797703 0.9406329 insignificant 1 1.00000 insignificant 0.02745640 0.47298198 insignificant 1.00000 insignificant 0.745658 0.6765900 0.0762358 6 0.694619 0.6624617 0.0321576 6.6912e-03 9.8149e-01 weaklyHypermeth 4.7794e-02 1.0000e+00 weaklyHypermeth 9.3400e-02 9.9713e-01 insignificant 6.6241e-01 1.0000000 insignificant 0.07192691 1.3743e-01 insignificant 1.0000e+00 insignificant 0.746181 0.8385370 -0.09687897 8 0.658905 0.825513 -0.1666080 1.0000e+00 8.1816e-05 weaklyHypometh 1.0000e+00 0.020454 weaklyHypometh 9.9999e-01 0.00201836 weaklyHypometh 1.0000000 0.31959 insignificant -0.1111147 0.00219545 weaklyHypometh 0.115550 insignificant 0.745368 0.6765900 0.0734704 6 0.719954 0.6624617 5.7492e-02 4.9555e-02 9.9710e-01 weaklyHypermeth 3.1364e-01 1.0000e+00 insignificant 1.6023e-01 0.9986941 insignificant 1.0000e+00 1.00000 insignificant 0.04447051 3.8831e-01 insignificant 1.0000e+00 insignificant 0.744591 0.8383929 -0.10456598 8 0.708027 0.812091 -0.1040637 9.9999e-01 8.5385e-06 weaklyHypometh 1.0000e+00 0.0028462 weaklyHypometh 9.9998e-01 0.00043050 weaklyHypometh 1.0000e+00 0.21525 insignificant -0.1385711 0.00222555 weaklyHypometh 0.21396 insignificant 0.6753070 0.8381038 -0.1776958 6 0.6339831 0.796432 -0.16244868 1.00000000 4.0957e-04 weaklyHypometh 1.00000 5.7686e-03 weaklyHypometh 1.0000000 7.7622e-03 weaklyHypometh 1 1.0489e-01 insignificant -0.1830416 3.4684e-03 weaklyHypometh 7.5401e-02 weaklyHypometh chr20 48200850 48201850 54832 TMEM189-UBE2V1 ENSG00000124208 0.8494352 216 5 0.6818615 70 5 0.727077 107 5 0.796818 70 5 0.805772 52 5 0.828837 139 5 0.738926 63 5 0.777019 61 4 0.6843434 71 5 0.7830409 54 3 0.711573 128 5 0.5804973 58 5 0.794149 53 4 NA 0 0 0.8380000 81 4 0.756566 52 5 0.7989706 56 5 0.780430 121 5 0.8008936 107 5 0.808013 98 5 0.820000 16 2 0.913333 31 3 0.747197 119 5 1.000000 15 2 0.971429 22 2 0.866190 110 5 0.960000 21 3 0.921818 26 2 0.7661111 55 5 0.772597 121 5 0.8252164 93 5 0.7624635 171 5 0.6132206 63 4 0.6487765 81 5 0.8344110 82 5 0.8636364 36 4 0.725967 34 3 0.7815449 106 5 0.862462 190 5 0.8453956 182 5 0.808421 127 5 0.811980 170 5 0.830426 168 5 0.8716537 0.7395777 0.7312686 0.8200686 0.8544474 0.864123 0.8261811 0.841478 0.7671765 0.7694196 0.7951392 0.6116792 0.7875731 NA 0.886226 0.7767296 0.8036765 0.8163826 0.8295656 0.780974 0.8358491 0.852830 0.756479 0.9692693 0.9514825 0.8928347 0.967925 0.8672384 0.7957023 0.806200 0.8644217 0.7942579 0.6800758 0.6484810 0.8764577 0.83051029 0.7277433 0.82325467 0.8915448 0.8600434 0.85769613 0.8257058 0.8620403 2 0.785757 0.817500 -2.8903e-02 5 0.773773 0.804654 -0.0308804 0.92127234 0.0447912 weaklyHypometh 1.00000 1.00000 insignificant 0.9991749 0.0024633 weaklyHypometh 1 0.49266 insignificant -0.09514951 0.00541540 lowCoverage 1.00000 lowCoverage 0.785757 0.7537313 0.0338850 5 0.773773 0.7452280 0.0285453 7.0253e-02 9.3295e-01 insignificant 4.3100e-01 1.0000e+00 insignificant 8.3678e-02 8.5940e-01 insignificant 6.0636e-01 1.0000000 insignificant 0.02078738 6.4981e-01 lowCoverage 1.0000e+00 lowCoverage 0.785757 0.8291517 -0.05634528 5 0.773773 0.833648 -0.0598744 9.9928e-01 1.0530e-02 weaklyHypometh 1.0000e+00 0.430700 insignificant 9.9944e-01 0.00487270 weaklyHypometh 1.0000000 0.40606 insignificant -0.0663568 0.00161307 lowCoverage 0.110136 lowCoverage 0.817500 0.7537313 0.0609295 5 0.804654 0.7452280 5.9426e-02 8.7139e-03 9.9752e-01 weaklyHypermeth 6.6518e-02 1.0000e+00 weaklyHypermeth 1.6404e-03 0.9995063 weaklyHypermeth 2.0505e-02 1.00000 weaklyHypermeth 0.11593689 4.0314e-02 lowCoverage 4.2436e-01 lowCoverage 0.817500 0.8291517 -0.02829268 5 0.804654 0.833648 -0.0289941 9.7767e-01 8.9936e-02 insignificant 1.0000e+00 1.0000000 insignificant 5.9065e-01 0.74932789 insignificant 1.0000e+00 1.00000 insignificant 0.0287927 0.32242886 lowCoverage 1.00000 lowCoverage 0.7537313 0.8291517 -0.0895838 5 0.7452280 0.833648 -0.08841975 0.99972942 4.2593e-03 weaklyHypometh 1.00000 4.1457e-02 weaklyHypometh 0.9992521 1.6846e-02 weaklyHypometh 1 1.8723e-01 insignificant -0.0871442 8.7891e-02 lowCoverage 7.7098e-01 lowCoverage chr20 48246450 48247450 54839 CEBPB ENSG00000172216 0.9146391 203 7 0.8441862 160 7 0.923809 112 5 0.895746 181 7 0.915353 66 5 0.815867 283 7 0.780966 99 7 0.902064 143 7 0.8327435 115 5 0.7970238 87 5 0.820248 261 7 0.7047059 36 4 0.916006 143 5 0.963707 57 4 0.8711180 104 5 0.916667 38 3 0.9214286 30 2 0.880532 210 5 0.8283875 98 5 0.922789 209 5 0.933909 100 7 0.882906 114 5 0.810368 123 5 0.905722 137 5 0.926622 105 7 0.908238 216 7 0.630803 115 5 0.812660 106 5 0.7461303 107 5 0.943987 214 7 0.8559557 184 7 0.8163488 282 7 0.7712553 152 7 0.9309833 89 5 0.8944204 122 6 0.7516835 108 5 0.786805 112 6 0.9443864 170 7 0.843559 167 7 0.9401897 162 7 0.650225 162 7 0.852040 138 5 0.927168 204 7 0.9381573 0.7822038 0.8741012 0.9049277 0.8502650 0.890998 0.6940878 0.863388 0.8038489 0.9001555 0.8873422 0.7379352 0.8712106 0.9426586 0.877588 0.8236613 0.9478134 0.8470245 0.8772109 0.880838 0.9046513 0.892517 0.804027 0.9364718 0.9151348 0.8765821 0.703301 0.9026094 0.9079536 0.920428 0.8537606 0.9018047 0.7690793 0.9170103 0.9630935 0.77381918 0.7958981 0.95888028 0.8452330 0.9290198 0.85587607 0.8722769 0.9057880 4 0.865275 0.880622 -1.7057e-02 5 0.751127 0.779822 -0.0286946 0.97048256 0.3048151 insignificant 1.00000 1.00000 insignificant 0.8842265 0.6599153 insignificant 1 1.00000 insignificant 0.02059516 0.50172129 insignificant 1.00000 insignificant 0.865604 0.8778220 -0.0060294 5 0.845018 0.8509964 -0.0059781 1.0467e-01 9.0670e-02 insignificant 6.2675e-01 1.0000e+00 insignificant 2.1610e-01 3.5519e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.02181036 5.8464e-01 insignificant 1.0000e+00 insignificant 0.865275 0.8907563 -0.01978410 5 0.751127 0.694095 0.0570326 4.9356e-01 3.7212e-01 insignificant 1.0000e+00 1.000000 insignificant 3.5492e-01 0.73332703 insignificant 1.0000000 1.00000 insignificant 0.0257628 0.65365976 insignificant 1.000000 insignificant 0.881601 0.8778220 0.0116511 5 0.877300 0.8509964 2.6303e-02 1.4737e-01 3.9248e-01 insignificant 8.2329e-01 1.0000e+00 insignificant 2.8030e-01 0.3882598 insignificant 1.0000e+00 1.00000 insignificant 0.00121520 9.7850e-01 insignificant 1.0000e+00 insignificant 0.880622 0.8907563 -0.00194953 5 0.779822 0.694095 0.0857272 5.2497e-01 6.7318e-01 insignificant 1.0000e+00 1.0000000 insignificant 5.4080e-01 0.89803220 insignificant 1.0000e+00 1.00000 insignificant 0.0051676 0.93205068 insignificant 1.00000 insignificant 0.8778220 0.8918269 -0.0104122 7 0.8509964 0.780857 0.07013975 0.64592776 5.9077e-01 insignificant 1.00000 1.0000e+00 insignificant 0.5629723 7.6130e-01 insignificant 1 1.0000e+00 insignificant 0.0039524 9.5142e-01 insignificant 1.0000e+00 insignificant chr20 48297950 48298950 54844 CEBPB ENSG00000172216 0.9424451 118 5 0.6111111 22 1 0.826667 22 1 0.765541 128 5 0.677778 35 6 0.950271 133 5 0.751263 33 2 0.895635 38 5 0.8111111 23 1 0.5000000 2 0 0.908854 109 5 0.8000000 13 0 0.833333 10 0 0.666667 8 0 0.9333333 16 0 0.000000 5 1 NA 0 0 0.800766 88 4 0.8313364 59 5 0.912821 87 5 0.910000 33 5 1.000000 3 0 0.776190 29 4 0.966667 53 5 0.774373 192 5 0.803922 43 5 0.966667 42 5 0.333333 14 1 0.7761905 36 4 0.730736 36 5 0.8733333 36 5 0.9742424 69 5 0.0681818 67 5 0.2272727 68 5 0.0000000 2 0 0.9333333 27 4 0.484259 58 6 0.8500699 81 5 0.781481 87 5 0.8852551 111 5 0.915238 86 5 0.954545 22 1 0.751880 134 5 0.9362245 0.6666667 0.8285714 0.8860465 0.4857143 0.932823 0.7142857 0.892857 0.8571429 0.9764203 0.9012987 0.8826532 1.0000000 0.8571429 0.952381 NA NA 0.9239190 0.8689928 0.900183 0.9000000 0.974428 0.877551 1.0000000 0.9610634 0.8487395 0.976190 0.8571429 0.8489796 0.737662 0.9190476 0.9610390 0.1948052 0.4415584 0.5572028 0.95238095 0.5936508 0.89120879 0.8952381 0.9284742 0.90204082 0.9409448 0.8747253 0 0.872497 0.904437 -2.1717e-02 5 0.757846 0.770254 -0.0124078 0.66250189 0.3402154 insignificant 1.00000 1.00000 insignificant 0.8815280 0.1695581 insignificant 1 1.00000 insignificant -0.06491343 0.37919451 lowCoverage 1.00000 lowCoverage 0.872497 0.5016502 0.3703013 5 0.757846 0.4077318 0.3501143 2.5323e-14 1.0000e+00 hypermethylated 6.4931e-13 1.0000e+00 hypermethylated 5.9428e-05 9.9999e-01 hypermethylated 1.2919e-03 1.0000000 hypermethylated 0.33170492 9.8735e-02 lowCoverage 7.7137e-01 lowCoverage 0.872497 0.9068182 -0.01065059 5 0.757846 0.759917 -0.0020709 5.7832e-01 5.5143e-01 insignificant 1.0000e+00 1.000000 insignificant 6.3844e-01 0.60910652 insignificant 1.0000000 1.00000 insignificant -0.0987890 0.13878318 lowCoverage 1.000000 lowCoverage 0.904437 0.5016502 0.3980530 5 0.770254 0.4077318 3.6252e-01 2.0283e-09 1.0000e+00 hypermethylated 4.0566e-08 1.0000e+00 hypermethylated 8.4230e-05 1.0000000 hypermethylated 1.7921e-03 1.00000 hypermethylated 0.39661835 5.8453e-02 lowCoverage 5.3983e-01 lowCoverage 0.904437 0.9068182 0.01120562 5 0.770254 0.759917 0.0103369 7.6507e-01 8.6308e-01 insignificant 1.0000e+00 1.0000000 insignificant 4.4863e-01 0.97982538 insignificant 1.0000e+00 1.00000 insignificant -0.0338756 0.61153299 lowCoverage 1.00000 lowCoverage 0.5016502 0.9068182 -0.3935699 5 0.4077318 0.759917 -0.35218514 0.99999997 3.1841e-04 hypomethylated 1.00000 4.7332e-03 hypomethylated 0.9999933 7.5568e-03 weaklyHypometh 1 1.0489e-01 insignificant -0.4304939 4.4686e-02 lowCoverage 4.8191e-01 lowCoverage chr20 48334150 48335150 54850 CEBPB ENSG00000172216 0.7375000 80 4 0.6433150 114 6 0.326730 146 7 0.786846 80 3 0.789165 82 5 0.566367 142 7 0.656358 116 6 0.724509 129 5 0.6731761 109 6 0.8051146 77 4 0.597000 197 6 0.7888199 42 2 0.830401 147 7 0.846289 79 4 0.7162048 132 7 0.589286 60 5 0.6250000 176 1 0.621142 105 3 0.7017606 213 6 0.693102 91 5 0.876778 95 5 0.538750 68 4 0.643919 61 6 0.769239 96 6 0.794444 35 3 0.803905 207 6 0.836169 99 6 0.450833 48 3 0.6561539 151 6 0.753978 239 7 0.7000251 183 6 0.8497512 108 6 0.3893281 125 6 0.2015082 150 7 0.6624650 178 6 0.4444444 15 1 0.510183 195 8 0.5339869 158 6 0.626401 91 5 0.6512110 80 5 0.410256 66 3 0.721198 87 4 0.728585 112 5 0.8416375 0.7309549 0.4885803 0.7833078 0.8123881 0.796109 0.8744999 0.857733 0.7555523 0.9085359 0.7993732 0.7224080 0.7677073 0.8157617 0.826210 0.8540210 0.7546332 0.5709445 0.8261550 0.755596 0.9085276 0.552308 0.920685 0.8477078 0.7393865 0.7831059 0.843375 0.6907343 0.8269903 0.855656 0.8605422 0.9398377 0.0711877 0.0101819 0.2519539 0.16783217 0.0881307 0.26622332 0.5852358 0.5738647 0.46369016 0.4846444 0.6301080 3 0.777010 0.807914 -4.1811e-02 5 0.647828 0.619309 0.0285191 0.98348446 0.0617785 insignificant 1.00000 1.00000 insignificant 0.9079823 0.4143671 insignificant 1 1.00000 insignificant -0.03692463 0.43139510 lowCoverage 1.00000 lowCoverage 0.777010 0.3532278 0.5273405 5 0.647828 0.4987552 0.1490733 1.4646e-18 9.0324e-01 hypermethylated 5.0505e-17 1.0000e+00 hypermethylated 2.5843e-05 7.8842e-01 hypermethylated 6.2292e-04 1.0000000 hypermethylated 0.22891824 1.3079e-02 lowCoverage 1.7674e-01 lowCoverage 0.777249 0.5756881 0.20910912 5 0.664254 0.671855 -0.0076007 1.7548e-03 2.6124e-01 weaklyHypermeth 5.3177e-02 1.000000 weaklyHypermeth 2.1455e-02 0.30001434 weaklyHypermeth 0.6457991 1.00000 insignificant 0.0583741 0.39517295 lowCoverage 1.000000 lowCoverage 0.807914 0.3532278 0.4882021 6 0.619309 0.4987552 1.2055e-01 3.1583e-18 9.5745e-01 hypermethylated 1.2147e-16 1.0000e+00 hypermethylated 2.1935e-04 0.8504490 hypermethylated 4.0619e-03 1.00000 hypermethylated 0.26584287 6.1289e-03 weaklyHypermeth 1.0388e-01 insignificant 0.810108 0.5756881 0.22754100 4 0.665899 0.671855 -0.0059553 1.3090e-05 4.2587e-01 lowCoverage 7.6998e-04 1.0000000 lowCoverage 3.7003e-02 0.37891875 lowCoverage 6.6076e-01 1.00000 lowCoverage 0.0952987 0.20601136 lowCoverage 1.00000 lowCoverage 0.3516484 0.5756881 -0.4268710 4 0.4430613 0.671855 -0.22879329 0.99988544 1.4557e-09 lowCoverage 1.00000 4.8524e-08 lowCoverage 0.9999655 3.1525e-03 lowCoverage 1 5.6295e-02 lowCoverage -0.1705442 7.8247e-02 lowCoverage 7.1889e-01 lowCoverage chr20 48335250 48336250 54851 CEBPB ENSG00000172216 0.8942133 165 7 0.7884275 185 7 0.640998 193 7 0.908532 114 7 0.823015 144 7 0.810958 171 7 0.841491 257 7 0.803299 127 7 0.8675510 177 7 0.9114634 148 7 0.847042 206 7 0.8632789 193 7 0.699439 184 7 0.929101 57 4 0.8153915 153 7 0.903961 150 7 0.8918426 88 5 0.670881 156 7 0.8066550 175 7 0.842037 162 7 0.967920 115 7 0.826473 82 7 0.874730 148 7 0.933655 139 7 0.703125 56 6 0.828313 221 7 0.893754 129 7 0.934769 105 7 0.8291973 152 6 0.833108 212 7 0.8704762 192 7 0.8773986 276 7 0.0366721 232 7 0.0208333 162 6 0.1689189 221 6 0.0871795 91 6 0.042180 196 7 0.0895412 270 7 0.850640 214 7 0.7418899 219 6 0.784664 101 7 0.783787 177 7 0.762552 132 6 0.8922310 0.7455487 0.6721918 0.9286144 0.8390969 0.834542 0.8534472 0.823831 0.8781051 0.8940495 0.8513297 0.8762410 0.7079158 0.8840017 0.799743 0.8880995 0.8604266 0.6394301 0.8290341 0.837788 0.9752824 0.808801 0.874250 0.9399564 0.6537834 0.8376220 0.876648 0.9154648 0.8469378 0.857957 0.8578684 0.8852791 0.0270246 0.0137240 0.1139225 0.06879708 0.0409897 0.06821306 0.8490333 0.7465153 0.80271277 0.7743747 0.7705549 6 0.826209 0.865900 -3.9690e-02 7 0.845880 0.885704 -0.0398241 0.99981038 0.0083153 weaklyHypometh 1.00000 0.67679 insignificant 0.9988852 0.0052927 weaklyHypometh 1 0.88211 insignificant -0.03643105 0.18513767 insignificant 1.00000 insignificant 0.826155 0.0477816 0.7712084 7 0.823863 0.0627298 0.7611335 3.1377e-78 1.0000e+00 hypermethylated 7.8443e-76 1.0000e+00 hypermethylated 2.5792e-17 1.0000e+00 hypermethylated 2.8658e-15 1.0000000 hypermethylated 0.75375801 3.3454e-12 hypermethylated 4.7791e-10 hypermethylated 0.826155 0.7888493 0.03029206 7 0.823863 0.788825 0.0350387 5.6038e-02 5.8649e-01 insignificant 8.1215e-01 1.000000 insignificant 8.5067e-04 0.67084983 weaklyHypermeth 0.0500395 1.00000 weaklyHypermeth 0.0432722 0.11414367 insignificant 1.000000 insignificant 0.865827 0.0477816 0.8146090 7 0.869377 0.0627298 8.0665e-01 4.7154e-65 1.0000e+00 hypermethylated 9.4308e-63 1.0000e+00 hypermethylated 3.7717e-15 1.0000000 hypermethylated 4.1908e-13 1.00000 hypermethylated 0.79018906 1.7899e-12 hypermethylated 5.9662e-10 hypermethylated 0.865827 0.7888493 0.07351282 7 0.869377 0.788825 0.0805519 2.4472e-04 9.9849e-01 weaklyHypermeth 9.0638e-03 1.0000000 weaklyHypermeth 4.1864e-04 0.99691069 weaklyHypermeth 4.1864e-02 1.00000 weaklyHypermeth 0.0797032 0.01162683 weaklyHypermeth 0.52849 insignificant 0.0477816 0.7888493 -0.7368075 7 0.0627298 0.788825 -0.72609479 1.00000000 4.1232e-42 hypomethylated 1.00000 1.3744e-39 hypomethylated 1.0000000 2.5257e-10 hypomethylated 1 3.6081e-08 hypomethylated -0.7104858 1.4924e-09 hypomethylated 1.4924e-06 hypomethylated chr20 48341950 48342950 54852 ENSG00000203999 0.7084920 402 13 0.5186688 546 14 0.433129 431 13 0.740710 274 10 0.694726 259 14 0.721264 514 13 0.605059 367 14 0.487885 461 14 0.5528662 426 14 0.6438756 350 14 0.635299 702 13 0.5962846 288 13 0.492679 536 13 0.608620 144 6 0.6053087 483 13 0.445694 201 13 0.5266893 196 10 0.520434 419 12 0.5460196 542 13 0.608109 413 14 0.681127 287 13 0.531690 188 12 0.677674 345 13 0.653447 296 14 0.719762 164 8 0.592695 585 13 0.564763 356 14 0.539116 251 13 0.6355633 401 13 0.601568 651 14 0.6007856 650 13 0.6795671 548 14 0.0537296 634 13 0.0714830 407 13 0.0820602 767 8 0.1386741 149 8 0.105054 383 16 0.2474975 653 13 0.566188 435 13 0.4145601 456 14 0.616582 288 12 0.465227 313 12 0.583715 374 13 0.6976496 0.5462400 0.4653404 0.7413118 0.7219023 0.670243 0.6290358 0.617937 0.5748982 0.7319847 0.8071906 0.6150850 0.5495937 0.6753929 0.629389 0.4579432 0.5747917 0.4471110 0.5928496 0.685740 0.7696834 0.516684 0.813955 0.7776709 0.7137998 0.6506116 0.648760 0.6651535 0.6403441 0.653145 0.6562681 0.7349816 0.0602698 0.0822171 0.0843421 0.12647713 0.0587780 0.25296003 0.6309816 0.4737973 0.63910944 0.4946316 0.5572838 12 0.611642 0.656925 -4.2223e-02 13 0.556736 0.568527 -0.0117904 0.99545999 0.0470659 weaklyHypometh 1.00000 1.00000 insignificant 0.9996463 0.0106163 weaklyHypometh 1 1.00000 insignificant -0.03855576 0.15869811 insignificant 1.00000 insignificant 0.611642 0.0795189 0.5133130 14 0.556736 0.1393143 0.4174220 1.4511e-68 1.0000e+00 hypermethylated 2.0731e-66 1.0000e+00 hypermethylated 3.7806e-27 1.0000e+00 hypermethylated 1.2602e-24 1.0000000 hypermethylated 0.46817430 7.3315e-08 hypermethylated 3.0548e-06 hypermethylated 0.611642 0.5760986 0.07279501 12 0.556736 0.477959 0.0787773 8.5567e-03 9.8288e-01 weaklyHypermeth 1.8206e-01 1.000000 insignificant 4.7666e-02 0.95203024 weaklyHypermeth 0.9869019 1.00000 insignificant 0.0553359 0.24429759 insignificant 1.000000 insignificant 0.656925 0.0795189 0.5588075 13 0.568527 0.1393143 4.2921e-01 2.3372e-69 1.0000e+00 hypermethylated 5.8430e-67 1.0000e+00 hypermethylated 6.3055e-25 1.0000000 hypermethylated 2.1018e-22 1.00000 hypermethylated 0.50673007 1.3572e-07 hypermethylated 6.4627e-06 hypermethylated 0.656925 0.5760986 0.11310015 12 0.568527 0.477959 0.0905677 3.4893e-05 9.6952e-01 weaklyHypermeth 1.6615e-03 1.0000000 weaklyHypermeth 2.5534e-03 0.99294303 weaklyHypermeth 1.2159e-01 1.00000 insignificant 0.0938917 0.06877262 insignificant 1.00000 insignificant 0.0795189 0.5760986 -0.4514248 12 0.1393143 0.477959 -0.33864468 1.00000000 8.4484e-27 hypomethylated 1.00000 1.2069e-24 hypomethylated 1.0000000 4.6685e-15 hypomethylated 1 1.1671e-12 hypomethylated -0.4128384 2.9078e-05 hypomethylated 2.4836e-03 hypomethylated chr20 48342150 48343150 54853 ENSG00000203999 0.7084920 402 13 0.5186688 546 14 0.433129 431 13 0.740710 274 10 0.694726 259 14 0.721264 514 13 0.605059 367 14 0.487885 461 14 0.5528662 426 14 0.6438756 350 14 0.635299 702 13 0.5962846 288 13 0.492679 536 13 0.608620 144 6 0.6053087 483 13 0.445694 201 13 0.5266893 196 10 0.520434 419 12 0.5460196 542 13 0.608109 413 14 0.681127 287 13 0.531690 188 12 0.677674 345 13 0.653447 296 14 0.719762 164 8 0.592695 585 13 0.564763 356 14 0.539116 251 13 0.6355633 401 13 0.601568 651 14 0.6007856 650 13 0.6795671 548 14 0.0537296 634 13 0.0714830 407 13 0.0820602 767 8 0.1386741 149 8 0.105054 383 16 0.2474975 653 13 0.566188 435 13 0.4145601 456 14 0.616582 288 12 0.465227 313 12 0.583715 374 13 0.6976496 0.5462400 0.4653404 0.7413118 0.7219023 0.670243 0.6290358 0.617937 0.5748982 0.7319847 0.8071906 0.6150850 0.5495937 0.6753929 0.629389 0.4579432 0.5747917 0.4471110 0.5928496 0.685740 0.7696834 0.516684 0.813955 0.7776709 0.7137998 0.6506116 0.648760 0.6651535 0.6403441 0.653145 0.6562681 0.7349816 0.0602698 0.0822171 0.0843421 0.12647713 0.0587780 0.25296003 0.6309816 0.4737973 0.63910944 0.4946316 0.5572838 12 0.611642 0.656925 -4.2223e-02 13 0.556736 0.568527 -0.0117904 0.99545999 0.0470659 weaklyHypometh 1.00000 1.00000 insignificant 0.9996463 0.0106163 weaklyHypometh 1 1.00000 insignificant -0.03855576 0.15869811 insignificant 1.00000 insignificant 0.611642 0.0795189 0.5133130 14 0.556736 0.1393143 0.4174220 1.4511e-68 1.0000e+00 hypermethylated 2.0731e-66 1.0000e+00 hypermethylated 3.7806e-27 1.0000e+00 hypermethylated 1.2602e-24 1.0000000 hypermethylated 0.46817430 7.3315e-08 hypermethylated 3.0548e-06 hypermethylated 0.611642 0.5760986 0.07279501 12 0.556736 0.477959 0.0787773 8.5567e-03 9.8288e-01 weaklyHypermeth 1.8206e-01 1.000000 insignificant 4.7666e-02 0.95203024 weaklyHypermeth 0.9869019 1.00000 insignificant 0.0553359 0.24429759 insignificant 1.000000 insignificant 0.656925 0.0795189 0.5588075 13 0.568527 0.1393143 4.2921e-01 2.3372e-69 1.0000e+00 hypermethylated 5.8430e-67 1.0000e+00 hypermethylated 6.3055e-25 1.0000000 hypermethylated 2.1018e-22 1.00000 hypermethylated 0.50673007 1.3572e-07 hypermethylated 6.4627e-06 hypermethylated 0.656925 0.5760986 0.11310015 12 0.568527 0.477959 0.0905677 3.4893e-05 9.6952e-01 weaklyHypermeth 1.6615e-03 1.0000000 weaklyHypermeth 2.5534e-03 0.99294303 weaklyHypermeth 1.2159e-01 1.00000 insignificant 0.0938917 0.06877262 insignificant 1.00000 insignificant 0.0795189 0.5760986 -0.4514248 12 0.1393143 0.477959 -0.33864468 1.00000000 8.4484e-27 hypomethylated 1.00000 1.2069e-24 hypomethylated 1.0000000 4.6685e-15 hypomethylated 1 1.1671e-12 hypomethylated -0.4128384 2.9078e-05 hypomethylated 2.4836e-03 hypomethylated chr20 48448150 48449150 54877 ENSG00000203999 0.8953216 74 5 0.7518293 73 5 0.827226 109 5 0.894931 59 5 0.892121 56 5 0.879115 148 5 0.855556 49 5 0.881438 118 5 0.8808333 59 5 0.7605583 79 5 0.857487 244 5 0.9111111 38 4 0.850539 80 5 0.929231 53 5 0.9018182 81 5 0.916667 18 1 0.3333333 5 0 0.922222 28 1 0.9205882 47 1 0.907586 111 5 0.882828 51 5 0.849231 36 5 0.400000 30 1 0.740952 35 5 0.700000 15 1 0.862034 172 5 0.881429 42 5 0.859091 22 1 0.7153846 39 1 0.915977 126 5 0.9491515 95 5 0.8697324 148 5 0.6902472 88 5 0.5000000 14 1 0.1000000 30 1 1.0000000 9 0 0.764777 82 5 0.9302231 99 5 0.942857 44 1 0.6666667 25 1 0.900000 54 5 0.885714 22 1 0.950000 31 1 0.9130220 0.7000601 0.8295425 0.9106899 0.8263764 0.838003 0.8239437 0.862254 0.8086854 0.7997777 0.8423191 0.9530516 0.8395126 0.8938245 0.906957 0.8728187 0.7666007 0.9483568 0.8902237 0.876253 0.8425096 0.865655 0.647887 0.6646546 0.7887324 0.8526920 0.926559 0.7343150 0.6446371 0.901524 0.9412975 0.8547336 0.7188262 0.5352113 NA 1.00000000 0.8077814 0.89600891 0.9642857 0.8547535 0.92957746 0.8933602 0.8732394 1 0.856115 0.850801 2.6510e-03 5 0.862538 0.856400 0.0061383 0.55883364 0.7406400 insignificant 1.00000 1.00000 insignificant 0.4127289 0.5057270 insignificant 1 1.00000 insignificant 0.04632467 0.38325550 lowCoverage 1.00000 lowCoverage 0.856115 0.7329193 0.1194308 5 0.862538 0.7650838 0.0974544 4.9717e-03 9.9914e-01 weaklyHypermeth 3.6588e-02 1.0000e+00 weaklyHypermeth 4.0054e-01 8.9959e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.18426767 2.3235e-01 lowCoverage 1.0000e+00 lowCoverage 0.856115 0.9034091 -0.06127284 1 0.862538 0.892549 -0.0300109 2.6811e-01 2.1344e-03 lowCoverage 1.0000e+00 0.234828 lowCoverage 8.7527e-01 0.00647716 lowCoverage 1.0000000 0.46265 lowCoverage -0.0205721 0.74082879 lowCoverage 1.000000 lowCoverage 0.850801 0.7329193 0.1176007 5 0.856400 0.7650838 9.1316e-02 5.1026e-02 9.8388e-01 insignificant 3.2092e-01 1.0000e+00 insignificant 3.8657e-01 0.8001692 insignificant 1.0000e+00 1.00000 insignificant 0.13794300 3.6490e-01 lowCoverage 1.0000e+00 lowCoverage 0.850801 0.9034091 -0.05894749 1 0.856400 0.892549 -0.0361492 4.0219e-01 1.5147e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 9.3277e-01 0.03077938 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.0668967 0.34601416 lowCoverage 1.00000 lowCoverage 0.7329193 0.9034091 -0.2026116 1 0.7650838 0.892549 -0.12746525 0.97621630 1.9622e-02 lowCoverage 1.00000 1.5953e-01 lowCoverage 0.9711748 3.8541e-02 lowCoverage 1 3.5024e-01 lowCoverage -0.2048397 2.0111e-01 lowCoverage 1.0000e+00 lowCoverage chr20 48505950 48506950 54892 ENSG00000210745,ENSG00000222505 0.7000000 25 4 0.9000000 30 4 0.583333 12 0 0.909445 246 8 0.800000 9 0 0.800000 9 0 0.812500 16 0 1.000000 5 0 1.0000000 2 0 0.9151786 61 6 0.956682 276 8 NA 0 0 0.949901 75 6 1.000000 2 0 NA 0 0 NA 0 0 0.6666667 6 0 0.944444 11 0 0.9439134 115 8 0.833333 7 0 1.000000 34 4 0.947222 37 4 NA 0 0 0.918696 73 6 0.941249 168 4 1.000000 2 0 0.837254 171 8 0.725207 74 2 0.9335275 215 8 0.936668 126 8 0.9337225 160 8 0.9475160 155 8 0.9750000 33 4 0.9351149 142 8 NA 0 0 0.4047619 42 2 0.746235 61 4 0.2200347 212 8 0.777778 38 4 0.9250000 33 4 0.900000 17 0 1.000000 4 0 0.950000 40 4 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0.910695 0.924280 -1.1208e-02 5 0.815303 0.855637 -0.0403334 0.80445889 0.1197959 insignificant 1.00000 1.00000 insignificant 0.8158408 0.9027789 insignificant 1 1.00000 insignificant -0.05448492 0.16494622 lowCoverage 1.00000 lowCoverage 0.910695 0.5428571 0.3699947 5 0.815303 0.5050880 0.3102155 1.0857e-08 1.0000e+00 hypermethylated 1.6450e-07 1.0000e+00 hypermethylated 4.0859e-02 9.9976e-01 weaklyHypermeth 3.3221e-01 1.0000000 insignificant 0.20938230 2.3396e-01 lowCoverage 1.0000e+00 lowCoverage 0.915385 0.9166667 -0.00057991 4 0.822336 0.883929 -0.0615929 7.8384e-01 2.4979e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 8.6569e-01 0.73063900 lowCoverage 1.0000000 1.00000 lowCoverage -0.0449439 0.36911397 lowCoverage 1.000000 lowCoverage 0.924280 0.5428571 0.3805600 8 0.855637 0.5050880 3.5055e-01 2.2992e-07 1.0000e+00 hypermethylated 3.1495e-06 1.0000e+00 hypermethylated 6.8268e-02 0.9998448 insignificant 4.8417e-01 1.00000 insignificant 0.26386722 1.5063e-01 lowCoverage 1.0000e+00 lowCoverage 0.941176 0.9166667 0.01470872 4 0.817095 0.883929 -0.0668337 6.2963e-01 8.0770e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 9.1456e-01 0.83898097 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.0095410 0.83365837 lowCoverage 1.00000 lowCoverage 0.5816993 0.9166667 -0.3221833 4 0.5016412 0.883929 -0.38228732 0.99988889 2.1088e-02 lowCoverage 1.00000 1.7006e-01 lowCoverage 0.9916703 5.9184e-01 lowCoverage 1 1.0000e+00 lowCoverage -0.2543262 1.6397e-01 lowCoverage 1.0000e+00 lowCoverage chr20 48524650 48525650 54897 ENSG00000210745,ENSG00000222505 0.7257971 158 4 0.6568365 138 6 0.532940 118 5 0.756897 157 5 0.604853 104 4 0.735359 284 7 0.820124 76 4 0.469624 136 5 0.5917766 91 5 0.7155556 76 5 0.751056 189 8 0.6121483 54 3 0.663899 125 5 0.857143 54 4 0.7043504 113 5 0.588095 38 3 0.9971098 352 1 0.762373 147 5 0.7834694 110 5 0.732725 207 6 0.688889 43 4 0.624505 68 5 0.807028 105 5 0.714799 38 4 0.785000 38 2 0.727244 233 7 0.663076 68 4 0.769658 55 3 0.7082418 102 5 0.767082 219 8 0.7295748 194 8 0.6928724 263 8 0.6781412 139 7 0.5522999 63 4 0.4307064 311 7 0.7107143 22 2 0.652661 140 5 0.7247151 201 7 0.893846 137 5 0.7877938 129 4 0.807476 137 3 0.909091 101 4 0.782890 149 6 0.8525457 0.6252547 0.6423121 0.8651919 0.9143166 0.822410 0.7500833 0.736062 0.7087612 0.7691198 0.7178543 0.4989037 0.7438538 0.7671614 0.698502 0.8247771 0.9051809 0.7664735 0.7826258 0.758220 0.7610390 0.703013 0.770962 0.7519385 0.6686979 0.7987047 0.722153 0.7824009 0.6871343 0.842868 0.8152174 0.8129985 0.6541784 0.4924330 0.2794048 0.77283539 0.7121433 0.83052133 0.8337158 0.8457686 0.86940588 0.8223140 0.9139080 1 0.774477 0.747546 1.5094e-02 7 0.709409 0.704722 0.0046878 0.46411313 0.4890953 insignificant 1.00000 1.00000 insignificant 0.7546359 0.3854444 insignificant 1 1.00000 insignificant -0.02005756 0.52034879 lowCoverage 1.00000 lowCoverage 0.774477 0.5627854 0.2173784 7 0.709409 0.5816649 0.1277445 1.3968e-04 9.9145e-01 hypermethylated 1.3830e-03 1.0000e+00 hypermethylated 6.5781e-02 9.4668e-01 insignificant 5.1025e-01 1.0000000 insignificant 0.07823361 1.7790e-01 lowCoverage 1.0000e+00 lowCoverage 0.774477 0.8529862 -0.07034094 5 0.709409 0.798129 -0.0887195 9.9003e-01 3.2533e-03 weaklyHypometh 1.0000e+00 0.234828 insignificant 9.9964e-01 0.00065773 weaklyHypometh 1.0000000 0.31959 insignificant -0.1331128 0.00392329 lowCoverage 0.186823 lowCoverage 0.747546 0.5627854 0.1735163 7 0.704722 0.5816649 1.2306e-01 8.8430e-05 9.9151e-01 weaklyHypermeth 9.4074e-04 1.0000e+00 weaklyHypermeth 7.9255e-03 0.9911629 weaklyHypermeth 7.8470e-02 1.00000 weaklyHypermeth 0.09829117 8.8743e-02 insignificant 7.2149e-01 insignificant 0.747546 0.8529862 -0.08900770 5 0.704722 0.798129 -0.0934073 9.9160e-01 4.5527e-04 weaklyHypometh 1.0000e+00 0.0758778 weaklyHypometh 9.9538e-01 0.00180159 weaklyHypometh 1.0000e+00 0.30026 insignificant -0.1130553 0.00894741 lowCoverage 0.42607 lowCoverage 0.5627854 0.8529862 -0.2903581 5 0.5816649 0.798129 -0.21646403 0.99994154 5.8603e-05 hypomethylated 1.00000 9.1567e-04 hypomethylated 0.9999870 1.8564e-04 hypomethylated 1 6.1881e-03 hypomethylated -0.2113464 4.3805e-03 lowCoverage 9.1260e-02 lowCoverage chr20 48525350 48526350 54898 ENSG00000210745,ENSG00000222505 0.9454545 108 5 0.6621315 56 7 0.568844 116 7 0.930105 117 5 0.930703 73 4 0.887060 102 7 0.807359 44 4 0.795881 101 7 0.8438776 59 7 0.9183673 69 7 0.857904 170 7 0.8295455 23 2 0.766328 104 7 1.000000 19 2 0.8097403 41 2 0.564626 21 2 0.5000000 10 0 0.867009 159 5 NA 0 0 0.500000 12 1 0.925397 44 5 0.734637 55 7 0.954762 66 5 0.886905 62 6 0.950000 45 5 0.814492 126 7 0.770635 37 5 0.578755 22 1 0.8484848 40 5 0.862133 145 7 0.7583333 62 4 0.7991633 148 7 0.7226940 52 4 0.5300310 92 5 0.1927083 174 4 0.5357143 13 0 0.616406 87 7 0.7597680 79 7 0.735119 67 5 0.8486280 75 5 0.727949 165 5 0.821429 63 5 0.699686 95 5 0.9454545 0.7169312 0.6030449 0.9301055 0.9561905 0.892046 0.8055556 0.829762 0.8803571 0.9380952 0.8517651 NA 0.7773829 1.0000000 0.844697 0.6111111 0.4166667 0.8670092 NA 0.710236 0.9462963 0.690410 0.947222 0.8869048 0.9213157 0.8522020 0.774074 0.5641026 0.8484848 0.872488 0.7805556 0.8426136 0.7790404 0.5708591 0.5016811 0.45833333 0.6397757 0.79380342 0.6909722 0.8486280 0.84927399 0.8214286 0.7329670 0 0.816239 0.822770 2.8750e-04 7 0.815872 0.817148 -0.0012755 0.53485189 0.2636876 insignificant 1.00000 1.00000 insignificant 0.7111840 0.1752244 insignificant 1 1.00000 insignificant -0.03496055 0.46394493 lowCoverage 1.00000 lowCoverage 0.816239 0.4607646 0.2873520 7 0.815872 0.5686749 0.2471973 5.6252e-13 9.8167e-01 hypermethylated 1.2785e-11 1.0000e+00 hypermethylated 2.8620e-03 8.9921e-01 weaklyHypermeth 3.2986e-02 1.0000000 weaklyHypermeth 0.22912714 3.8849e-02 lowCoverage 3.9642e-01 lowCoverage 0.816239 0.7763441 0.07246190 5 0.815872 0.749496 0.0663758 2.5560e-02 7.9506e-01 weaklyHypermeth 4.5644e-01 1.000000 insignificant 2.4899e-02 0.89998941 weaklyHypermeth 0.6916346 1.00000 insignificant 0.0221187 0.63589852 lowCoverage 1.000000 lowCoverage 0.822770 0.4607646 0.2988608 7 0.817148 0.5686749 2.4847e-01 5.0085e-10 9.9925e-01 hypermethylated 1.1130e-08 1.0000e+00 hypermethylated 7.0777e-04 0.9976499 hypermethylated 1.0317e-02 1.00000 hypermethylated 0.26408769 2.2479e-02 lowCoverage 2.8099e-01 lowCoverage 0.822770 0.7763441 0.07851093 5 0.817148 0.749496 0.0676513 7.4493e-03 8.7718e-01 weaklyHypermeth 1.4325e-01 1.0000000 insignificant 3.4575e-03 0.85398496 weaklyHypermeth 1.4553e-01 1.00000 insignificant 0.0570792 0.20064411 insignificant 1.00000 insignificant 0.4607646 0.7763441 -0.2902339 5 0.5686749 0.749496 -0.18082149 0.94655527 1.9861e-05 hypomethylated 1.00000 3.6779e-04 hypomethylated 0.7381467 4.0976e-02 weaklyHypometh 1 3.6586e-01 insignificant -0.2070085 5.5159e-02 lowCoverage 5.4685e-01 lowCoverage chr20 48590850 48591850 54910 PTPN1 ENSG00000196396 0.9336419 386 6 0.8152413 204 6 0.924297 91 5 0.928615 259 6 0.967857 82 5 0.904934 395 6 0.786427 145 6 0.910714 92 5 0.8055556 58 5 1.0000000 24 2 0.867963 340 6 0.7750000 28 2 0.979592 61 5 0.933333 48 5 0.8914657 105 5 1.000000 28 4 NA 0 0 0.901391 316 6 0.9415377 164 5 0.964522 307 6 0.823593 68 6 0.800000 6 0 0.775510 134 6 0.906396 124 5 0.816667 60 6 0.860755 182 6 0.802827 59 5 0.833333 40 4 0.8600733 144 5 0.757198 165 6 0.7646447 190 6 0.8169746 289 6 0.7646163 181 6 0.9285714 145 6 0.6696429 159 6 0.8421053 22 1 0.809962 164 6 0.9396601 217 6 0.965295 388 6 0.9681549 310 6 0.800292 304 6 0.797367 281 5 0.826658 304 6 0.9226092 0.7725746 0.9181820 0.9329734 0.9592920 0.900550 0.9169082 0.936157 0.9209440 1.0000000 0.9350112 0.8929204 0.9671302 0.9327434 0.959200 1.0000000 NA 0.9112263 0.9229324 0.960800 0.8785772 0.976533 0.917826 0.8927162 0.9793510 0.8950726 0.871624 0.9675516 0.8131700 0.925636 0.9233357 0.9705687 0.9328318 1.0000000 0.7610619 0.92050093 0.9407233 0.96859135 0.9563915 0.9692010 0.92525933 0.9262466 0.9638551 1 0.912516 0.893224 1.8520e-02 6 0.812449 0.743745 0.0687047 0.10175229 0.9945358 insignificant 1.00000 1.00000 insignificant 0.1272157 0.9956399 insignificant 1 1.00000 insignificant 0.08878775 0.00013095 lowCoverage 0.13095 lowCoverage 0.912460 0.9042793 0.0063367 6 0.789006 0.7608032 0.0282025 1.6604e-01 1.0449e-01 insignificant 9.4879e-01 1.0000e+00 insignificant 5.0404e-01 2.0970e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.08119236 1.1471e-01 lowCoverage 8.6904e-01 lowCoverage 0.912460 0.9445495 -0.03378508 6 0.789006 0.837756 -0.0487507 9.9472e-01 3.4211e-02 weaklyHypometh 1.0000e+00 0.855275 insignificant 9.0999e-01 0.39558742 insignificant 1.0000000 1.00000 insignificant 0.0353988 0.43784635 lowCoverage 1.000000 lowCoverage 0.893151 0.9042793 -0.0142011 6 0.711713 0.7608032 -4.9090e-02 9.2870e-01 7.9204e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9507e-01 0.0508386 insignificant 1.0000e+00 1.00000 insignificant -0.00759539 8.6731e-01 insignificant 1.0000e+00 insignificant 0.893151 0.9445495 -0.05180026 6 0.711713 0.837756 -0.1260435 9.9966e-01 4.5095e-03 weaklyHypometh 1.0000e+00 0.4325986 insignificant 9.6582e-01 0.18936467 insignificant 1.0000e+00 1.00000 insignificant -0.0533890 0.25274387 insignificant 1.00000 insignificant 0.9042793 0.9445495 -0.0388631 6 0.7608032 0.837756 -0.07695320 0.16546914 1.5860e-01 insignificant 1.00000 9.2208e-01 insignificant 0.1297776 9.2257e-01 insignificant 1 1.0000e+00 insignificant -0.0457936 4.4424e-01 insignificant 1.0000e+00 insignificant chr20 48695150 48696150 54917 FAM65C ENSG00000042062 0.2404918 129 6 0.1007980 195 6 0.135760 95 6 0.298993 73 4 0.118252 134 5 0.427258 135 5 0.065829 170 6 0.134746 99 6 0.1505948 195 5 0.3647964 113 5 0.328601 122 6 0.1228836 64 5 0.064014 154 5 0.360191 58 3 0.2813096 105 5 0.216000 61 4 0.0053191 76 3 0.116473 84 4 0.0403439 72 5 0.152022 189 5 0.113333 45 3 0.176999 58 5 0.372075 150 5 0.123377 61 5 0.207143 32 4 0.195164 204 6 0.058824 41 2 0.607143 25 3 0.2505051 49 2 0.221163 213 6 0.1950952 121 6 0.2014255 151 5 0.1512097 142 6 0.1785714 51 3 0.2000000 139 5 0.3508772 33 3 0.141098 91 6 0.1527778 118 6 0.220215 73 5 0.1916221 95 6 0.232143 20 2 0.092500 74 5 0.385344 59 5 0.2915743 0.0400392 0.2092616 0.1516634 0.0357670 0.414356 0.0303660 0.085213 0.0754295 0.1051833 0.2664605 0.1219504 0.0312464 0.1308465 0.055709 0.0411359 0.0162110 0.0190740 0.0631659 0.046543 0.1242009 0.062678 0.189661 0.2280733 0.2841487 0.0605639 0.188558 0.3218800 0.3682341 0.134520 0.2146757 0.1229273 0.0141958 0.0436052 0.0238954 0.03600494 0.0143213 0.01255708 0.1354962 0.0378727 0.22135790 0.0144845 0.2064853 2 0.176217 0.222802 -5.0920e-02 6 0.129732 0.241394 -0.1116624 0.99930329 0.0300085 weaklyHypometh 1.00000 0.90156 insignificant 0.9998061 0.1045280 insignificant 1 1.00000 insignificant -0.04061997 0.41909959 lowCoverage 1.00000 lowCoverage 0.176217 0.1602787 0.0887924 6 0.129732 0.1158412 0.0138906 8.1951e-05 6.6850e-02 weaklyHypermeth 8.3624e-04 1.0000e+00 weaklyHypermeth 6.2493e-05 7.4025e-01 weaklyHypermeth 1.3296e-03 1.0000000 weaklyHypermeth -0.00952193 8.2458e-01 lowCoverage 1.0000e+00 lowCoverage 0.176598 0.1869159 -0.01892677 5 0.194598 0.254511 -0.0599132 5.5923e-01 4.3125e-02 weaklyHypometh 1.0000e+00 0.962444 insignificant 6.8902e-01 0.36511324 insignificant 1.0000000 1.00000 insignificant -0.0381309 0.50589443 lowCoverage 1.000000 lowCoverage 0.222802 0.1602787 0.1259408 6 0.241394 0.1158412 1.2555e-01 4.5832e-09 3.0448e-01 weaklyHypermeth 8.6476e-08 1.0000e+00 weaklyHypermeth 4.4919e-05 0.6217385 weaklyHypermeth 1.0695e-03 1.00000 weaklyHypermeth 0.03109804 5.6052e-01 lowCoverage 1.0000e+00 lowCoverage 0.222807 0.1869159 0.03166652 5 0.250980 0.254511 -0.0035307 1.9494e-01 5.9544e-01 insignificant 1.0000e+00 1.0000000 insignificant 2.2751e-01 0.75715054 insignificant 1.0000e+00 1.00000 insignificant 0.0024891 0.96904005 lowCoverage 1.00000 lowCoverage 0.1614035 0.1869159 -0.0894205 5 0.1737618 0.254511 -0.08074909 0.38972005 1.0860e-03 weaklyHypometh 1.00000 1.3244e-02 weaklyHypometh 0.4864615 3.2444e-03 weaklyHypometh 1 5.6920e-02 weaklyHypometh -0.0286090 6.3114e-01 lowCoverage 1.0000e+00 lowCoverage chr20 48775150 48776150 54930 FAM65C ENSG00000042062 0.7753208 465 14 0.6221531 956 17 0.650377 403 17 0.634857 463 15 0.758512 284 14 0.733122 1000 16 0.745254 359 15 0.780318 346 14 0.7946496 265 14 0.7137508 232 16 0.721675 686 17 0.7398006 219 12 0.714034 292 15 0.848046 120 7 0.7432089 289 13 0.789469 141 11 0.8357504 359 9 0.711243 396 14 0.7093658 315 14 0.776716 607 14 0.611769 134 13 0.707935 159 13 0.676689 419 16 0.736470 185 13 0.790287 143 12 0.756734 583 15 0.646125 303 16 0.675625 132 12 0.7431092 394 17 0.788214 617 15 0.7507124 439 15 0.8155777 637 14 0.6505920 508 17 0.6175575 248 12 0.7446980 595 15 0.7952065 70 4 0.638428 404 15 0.7249748 465 15 0.720893 426 15 0.6151416 659 14 0.617169 582 15 0.798595 294 14 0.745666 390 15 0.7873101 0.6912299 0.6798270 0.7227946 0.7657099 0.767414 0.7524855 0.714995 0.7675495 0.8089824 0.7716921 0.7410006 0.7698699 0.7684161 0.748896 0.7859590 0.7937948 0.6931254 0.7756185 0.743471 0.6889140 0.730628 0.667004 0.7031035 0.7620306 0.7379887 0.732418 0.6643076 0.7304536 0.760927 0.7197019 0.7802905 0.7031477 0.6185575 0.7265744 0.76834413 0.6828057 0.74019967 0.7431848 0.7081305 0.67558149 0.7903108 0.7067736 9 0.723435 0.728764 6.8339e-03 16 0.687862 0.680408 0.0074534 0.61758954 0.6187382 insignificant 1.00000 1.00000 insignificant 0.1412566 0.6668682 insignificant 1 1.00000 insignificant 0.01494377 0.51105426 insignificant 1.00000 insignificant 0.723435 0.6903930 0.0529933 17 0.687862 0.5721876 0.1156741 3.1124e-08 4.1469e-01 weaklyHypermeth 4.5770e-07 1.0000e+00 weaklyHypermeth 2.0789e-03 6.9180e-01 weaklyHypermeth 2.4749e-02 1.0000000 weaklyHypermeth 0.04463832 1.9852e-01 insignificant 1.0000e+00 insignificant 0.723544 0.6044236 0.05055057 16 0.698298 0.636685 0.0616133 1.7464e-04 9.0064e-01 weaklyHypermeth 7.5928e-03 1.000000 weaklyHypermeth 4.9345e-02 0.69581994 weaklyHypermeth 0.9869019 1.00000 insignificant 0.0403883 0.34253983 insignificant 1.000000 insignificant 0.728764 0.6903930 0.0452685 16 0.680408 0.5721876 1.0822e-01 6.1272e-07 5.1924e-01 weaklyHypermeth 8.1696e-06 1.0000e+00 weaklyHypermeth 1.0081e-02 0.6863877 weaklyHypermeth 9.7877e-02 1.00000 weaklyHypermeth 0.02969455 4.0236e-01 insignificant 1.0000e+00 insignificant 0.729338 0.6044236 0.03915580 16 0.699690 0.636685 0.0630051 1.1890e-03 7.8300e-01 weaklyHypermeth 3.1288e-02 1.0000000 weaklyHypermeth 4.4261e-02 0.72695849 weaklyHypermeth 7.2613e-01 1.00000 insignificant 0.0254445 0.55251297 insignificant 1.00000 insignificant 0.6912986 0.6044236 -0.0314828 16 0.6039758 0.636685 -0.03270940 0.07310557 9.3450e-03 weaklyHypometh 1.00000 8.1974e-02 weaklyHypometh 0.6901257 2.4968e-01 insignificant 1 1.0000e+00 insignificant -0.0042501 9.2896e-01 insignificant 1.0000e+00 insignificant chr20 48817650 48818650 54939 PARD6B ENSG00000124171 0.6561782 268 10 0.6209558 333 17 0.585097 237 15 0.675339 366 15 0.492156 215 14 0.657665 839 15 0.442643 188 10 0.630367 233 14 0.6253574 134 10 0.6440074 205 10 0.643808 452 17 0.6790049 95 7 0.630199 238 13 0.797346 81 10 0.6470157 209 13 0.546875 88 8 0.6209829 159 6 0.585520 269 14 0.7247151 231 12 0.581576 414 14 0.714717 125 10 0.816212 188 8 0.646653 312 14 0.609174 188 13 0.628312 156 12 0.638935 308 13 0.639936 328 13 0.665097 225 10 0.7300263 243 15 0.557252 372 14 0.6469635 378 14 0.5228564 595 15 0.6617396 252 15 0.8020516 238 17 0.8014296 320 14 0.6206148 113 11 0.690074 383 14 0.7220789 310 15 0.677067 224 13 0.7090726 456 14 0.607251 367 17 0.641232 179 7 0.647761 274 15 0.8230306 0.7573935 0.8160898 0.8175296 0.7382240 0.784204 0.7493434 0.844940 0.7373680 0.8411694 0.7812647 0.7795761 0.8313369 0.8113154 0.831038 0.7539865 0.7620832 0.7559523 0.8515927 0.796642 0.8147888 0.865571 0.819553 0.8529340 0.8347559 0.8304249 0.806555 0.8410163 0.8219442 0.727861 0.8652040 0.7612176 0.7619336 0.7964661 0.7649387 0.75369201 0.7827999 0.84160503 0.7939811 0.8701048 0.83284226 0.8703851 0.7930209 2 0.725248 0.703920 -1.1268e-02 15 0.598540 0.591843 0.0066971 0.68361402 0.1720790 insignificant 1.00000 1.00000 insignificant 0.9429686 0.0130581 weaklyHypometh 1 1.00000 insignificant -0.02700413 0.34587056 insignificant 1.00000 insignificant 0.725248 0.7475248 -0.0221765 15 0.598540 0.7452058 -0.1466657 2.8009e-04 4.6097e-22 weaklyHypometh 2.6675e-03 4.6097e-19 weaklyHypometh 8.9834e-02 1.2395e-02 weaklyHypometh 6.4629e-01 0.9752561 insignificant -0.09199107 2.7934e-02 weaklyHypometh 3.1386e-01 insignificant 0.725677 0.7706667 -0.03085307 15 0.603726 0.636554 -0.0328280 8.3550e-01 2.0291e-04 weaklyHypometh 1.0000e+00 0.036867 weaklyHypometh 9.2439e-01 0.06896710 insignificant 1.0000000 1.00000 insignificant -0.0321365 0.20734796 insignificant 1.000000 insignificant 0.703920 0.7475248 -0.0385403 15 0.591843 0.7452058 -1.5336e-01 5.8954e-03 1.1317e-12 weaklyHypometh 4.6789e-02 1.1317e-09 weaklyHypometh 3.6906e-02 0.1682090 inconclusive 2.9290e-01 1.00000 insignificant -0.06498694 1.1297e-01 insignificant 8.6236e-01 insignificant 0.704899 0.7706667 -0.01576877 15 0.605449 0.636554 -0.0311057 3.8134e-01 2.2163e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant 3.2845e-01 0.41347199 insignificant 1.0000e+00 1.00000 insignificant -0.0051324 0.85795157 insignificant 1.00000 insignificant 0.7478315 0.7706667 -0.0394395 15 0.7581114 0.636554 0.12155699 0.00467144 2.0034e-03 weaklyHypometh 0.33878 2.3553e-02 weaklyHypometh 0.3806292 1.4917e-01 insignificant 1 1.0000e+00 insignificant 0.0598546 1.2502e-01 insignificant 9.8439e-01 insignificant chr20 48839850 48840850 54943 PARD6B ENSG00000124171 0.0050505 166 5 0.0330913 226 5 0.010070 352 5 0.029345 199 5 0.013795 218 5 0.230494 364 5 0.076531 185 5 0.012818 287 5 0.0056497 316 5 0.0121892 465 5 0.173469 246 5 0.0329996 333 5 0.125813 270 5 0.013997 271 5 0.0251557 517 5 0.030303 175 5 0.0109890 49 5 0.011429 206 5 0.0225067 224 5 0.023878 181 5 0.155280 118 5 0.109977 213 5 0.119653 151 5 0.028288 123 5 0.166667 135 5 0.154506 308 5 0.187500 330 5 0.216675 220 6 0.1794117 209 5 0.030267 356 5 0.1740741 216 5 0.0062893 231 5 0.1428571 149 5 0.0000000 96 5 0.5000000 62 1 0.1666667 50 4 0.161058 174 5 0.0088905 217 5 0.107959 204 5 0.0137931 153 5 0.000000 139 5 0.019524 132 5 0.136994 176 5 0.0063246 0.0327963 0.0116687 0.0292828 0.0140639 0.022327 0.0075188 0.017739 0.0066751 0.0191772 0.0080373 0.0397605 0.0495271 0.0140931 0.024295 0.0382775 0.0161943 0.0110967 0.0217127 0.028807 0.0181488 0.019604 0.025337 0.0277051 0.0000000 0.0158706 0.000000 0.0132676 0.0507900 0.035631 0.0088123 0.0079444 0.0000000 0.0000000 NA 0.00000000 0.0071199 0.01055497 0.0296244 0.0130797 0.00000000 0.0185032 0.0307026 5 0.022286 0.024521 9.9672e-04 5 0.060582 0.149942 -0.0893599 0.81968009 0.2532011 insignificant 1.00000 1.00000 insignificant 0.6752264 0.3103203 insignificant 1 1.00000 insignificant -0.08240364 0.00285713 weaklyHypometh 0.95238 insignificant 0.022286 0.0106952 0.0153653 5 0.060582 0.2129822 -0.1524002 2.4103e-02 9.5338e-01 weaklyHypermeth 1.5651e-01 1.0000e+00 insignificant 5.3622e-03 8.5677e-01 weaklyHypermeth 5.8224e-02 1.0000000 weaklyHypermeth -0.11826668 1.7313e-01 lowCoverage 1.0000e+00 lowCoverage 0.022142 0.0211443 0.00233724 5 0.062257 0.116333 -0.0540752 5.1638e-01 3.9340e-01 insignificant 1.0000e+00 1.000000 insignificant 4.4652e-01 0.36495334 insignificant 1.0000000 1.00000 insignificant -0.0106754 0.74237394 insignificant 1.000000 insignificant 0.024521 0.0106952 0.0140943 5 0.149942 0.2129822 -6.3040e-02 5.3684e-02 8.5216e-01 insignificant 3.3553e-01 1.0000e+00 insignificant 5.8766e-02 0.9633302 insignificant 4.3531e-01 1.00000 insignificant -0.03586304 6.5731e-01 lowCoverage 1.0000e+00 lowCoverage 0.021285 0.0211443 -0.00069757 5 0.080875 0.116333 -0.0354578 6.4687e-01 6.7372e-01 insignificant 1.0000e+00 1.0000000 insignificant 7.7946e-01 0.51881183 insignificant 1.0000e+00 1.00000 insignificant 0.0717282 0.06863008 insignificant 1.00000 insignificant 0.0054054 0.0211443 -0.0149462 5 0.0458810 0.116333 -0.07045160 0.99861777 8.8406e-03 weaklyHypometh 1.00000 7.8236e-02 weaklyHypometh 0.9998203 2.4570e-02 weaklyHypometh 1 2.5594e-01 insignificant 0.1075912 2.1989e-01 lowCoverage 1.0000e+00 lowCoverage chr20 49030350 49031350 54955 MOCS3 ENSG00000124217 0.8687779 406 8 0.7851464 288 8 0.726141 252 8 0.901809 417 8 0.802868 137 8 0.895169 493 8 0.662638 221 8 0.723887 245 8 0.8764788 290 8 0.7229944 301 8 0.779541 326 8 0.7509420 177 7 0.770169 369 8 0.699742 155 5 0.7885977 310 8 0.906906 145 6 0.7485859 213 7 0.798929 475 8 0.8439376 221 7 0.889111 382 8 0.606653 107 6 0.776363 192 8 0.727282 206 8 0.627932 152 8 0.875480 173 8 0.898159 351 8 0.713281 224 8 0.658361 136 8 0.7099147 216 8 0.783155 365 8 0.8108124 330 8 0.7653773 495 8 0.6177272 218 8 0.7773858 161 8 0.7436869 233 8 0.7458333 60 6 0.693963 180 8 0.6969483 327 8 0.907854 502 8 0.9053750 442 8 0.845688 424 8 0.858352 396 8 0.857276 535 8 0.8546967 0.7519671 0.7593512 0.8893668 0.8940948 0.877747 0.8226322 0.870365 0.8572719 0.8860906 0.8383231 0.8047475 0.8517509 0.8116971 0.855147 0.8890476 0.8191736 0.8696368 0.8575386 0.880369 0.7765349 0.785161 0.899061 0.8495151 0.8486857 0.8818458 0.770143 0.8450955 0.8102960 0.858022 0.8952144 0.8581677 0.6365126 0.7518622 0.7980611 0.74703219 0.7204373 0.74045144 0.8863858 0.8784755 0.83002016 0.8448342 0.8171915 7 0.858320 0.850204 6.2305e-03 8 0.686117 0.565471 0.1206462 0.75083475 0.9859625 insignificant 1.00000 1.00000 insignificant 0.8817320 0.9549091 insignificant 1 1.00000 insignificant 0.05105426 0.11518053 insignificant 1.00000 insignificant 0.860365 0.7427844 0.1213657 8 0.782331 0.6861762 0.0961549 7.9617e-07 9.2912e-01 weaklyHypermeth 1.0207e-05 1.0000e+00 weaklyHypermeth 8.0920e-02 7.7449e-01 insignificant 5.9066e-01 1.0000000 insignificant 0.08452777 1.2712e-02 weaklyHypermeth 1.7438e-01 insignificant 0.860489 0.8586342 0.01043228 8 0.845071 0.879865 -0.0347938 4.4819e-01 4.8657e-01 insignificant 1.0000e+00 1.000000 insignificant 5.1820e-01 0.35598738 insignificant 1.0000000 1.00000 insignificant -0.0777904 0.00177421 weaklyHypometh 0.110136 insignificant 0.854850 0.7421544 0.1196062 8 0.707335 0.6289949 7.8340e-02 2.1643e-03 9.8509e-01 weaklyHypermeth 1.8342e-02 1.0000e+00 weaklyHypermeth 3.1413e-01 0.8600395 insignificant 1.0000e+00 1.00000 insignificant 0.03347350 3.5212e-01 insignificant 1.0000e+00 insignificant 0.856458 0.8586342 0.00166624 8 0.832003 0.879865 -0.0478624 7.5491e-01 2.0672e-01 insignificant 1.0000e+00 1.0000000 insignificant 4.9633e-01 0.35348338 insignificant 1.0000e+00 1.00000 insignificant -0.1288447 0.00054630 weaklyHypometh 0.19662 insignificant 0.7431973 0.8586342 -0.1159987 8 0.7275487 0.879865 -0.15231639 0.93805296 5.1548e-03 weaklyHypometh 1.00000 4.8630e-02 weaklyHypometh 0.8688797 7.6651e-02 insignificant 1 6.0355e-01 insignificant -0.1623182 3.1637e-04 weaklyHypometh 1.3755e-02 weaklyHypometh chr20 49142550 49143550 54960 KCNG1 ENSG00000026559 0.6296794 181 6 0.6935159 173 6 0.791005 44 6 0.767254 203 6 0.648352 24 1 0.783981 214 6 0.830305 46 3 0.844697 74 4 0.6012987 34 3 0.6720779 33 4 0.764143 205 6 0.6142857 14 1 0.944107 81 4 0.675000 12 1 0.7045455 23 1 0.333333 5 0 0.5000000 6 1 0.630225 98 6 0.6104410 91 4 0.821222 188 6 0.938933 79 4 0.595833 21 3 0.783279 71 6 0.896104 70 6 0.842063 40 3 0.682836 207 6 0.608610 83 6 0.516667 17 1 0.8148148 84 6 0.685047 219 6 0.7298958 194 6 0.8288507 200 6 0.6412833 145 6 0.3625000 88 6 0.3070423 79 1 1.0000000 10 0 0.675099 73 6 0.7266405 209 6 0.669220 156 3 0.6049977 201 6 0.612819 237 6 0.708333 28 1 0.755609 211 6 0.8004488 0.6885688 0.7401395 0.7977050 0.7045455 0.774730 0.7927853 0.780785 0.7710055 0.7714482 0.7568864 0.6181818 0.8586149 0.8293117 0.741047 0.7762814 NA 0.7475649 0.7846115 0.852752 0.9224464 0.638202 0.940944 0.8725895 0.9069986 0.8004405 0.668864 0.7171717 0.8804714 0.771132 0.8170192 0.8802776 0.8101820 0.3791667 0.6645734 0.91558606 0.7901635 0.73300866 0.7049691 0.8125008 0.73160752 0.8535354 0.7865319 1 0.742138 0.782879 -2.0560e-02 6 0.700611 0.683719 0.0168916 0.63435860 0.2584455 insignificant 1.00000 1.00000 insignificant 0.8428161 0.2577305 insignificant 1 1.00000 insignificant -0.05060444 0.30286571 lowCoverage 1.00000 lowCoverage 0.742841 0.6407285 0.1203808 6 0.746521 0.5636635 0.1828572 5.8556e-04 9.9742e-01 weaklyHypermeth 5.2753e-03 1.0000e+00 weaklyHypermeth 9.7842e-02 9.5017e-01 insignificant 6.8903e-01 1.0000000 insignificant 0.07421254 5.1881e-01 lowCoverage 1.0000e+00 lowCoverage 0.742841 0.6302521 0.04456027 6 0.746521 0.693880 0.0526410 6.2801e-03 5.6842e-01 weaklyHypermeth 1.4953e-01 1.000000 insignificant 2.7970e-01 0.52005382 insignificant 1.0000000 1.00000 insignificant 0.0227775 0.59265239 lowCoverage 1.000000 lowCoverage 0.783320 0.6407285 0.1433107 6 0.706684 0.5636635 1.4302e-01 2.0816e-03 9.8564e-01 weaklyHypermeth 1.7945e-02 1.0000e+00 weaklyHypermeth 2.8034e-01 0.9855165 insignificant 1.0000e+00 1.00000 insignificant 0.12481698 2.9904e-01 lowCoverage 1.0000e+00 lowCoverage 0.783320 0.6302521 0.05918385 6 0.706684 0.693880 0.0128047 6.9624e-02 6.1633e-01 insignificant 9.1610e-01 1.0000000 insignificant 1.4192e-01 0.79278604 insignificant 1.0000e+00 1.00000 insignificant 0.0733819 0.14029431 lowCoverage 1.00000 lowCoverage 0.6407285 0.6302521 -0.0908895 6 0.5636635 0.693880 -0.13021611 0.47261525 8.4637e-02 insignificant 1.00000 5.3555e-01 insignificant 0.7056467 3.9043e-01 insignificant 1 1.0000e+00 insignificant -0.0514350 6.5056e-01 lowCoverage 1.0000e+00 lowCoverage chr20 49363750 49364750 54969 ENSG00000219218 0.9094505 319 9 0.8500207 401 9 0.850785 170 9 0.905897 192 5 0.881650 118 7 0.860565 414 9 0.812443 153 8 0.918193 189 9 0.8395522 175 9 0.9291109 116 8 0.903425 334 9 0.8568975 71 8 0.953864 219 8 1.000000 18 2 0.9307548 187 9 0.920547 89 7 0.9623225 71 6 0.932828 183 8 0.9169383 298 9 0.939539 302 9 0.919039 155 9 0.984078 57 3 0.935424 194 9 0.879651 110 9 0.748016 31 3 0.938492 404 9 0.839484 133 9 0.801832 91 7 0.9429012 226 9 0.929319 441 9 0.9497683 418 9 0.9488667 374 9 0.8472184 355 9 0.8445802 213 9 0.8546356 347 6 1.0000000 22 2 0.912314 161 9 0.9548820 418 8 0.954658 315 8 0.9357716 323 9 0.874843 216 8 0.899177 163 9 0.958468 226 6 0.8971840 0.8566753 0.8580529 0.9222725 0.8522059 0.862348 0.8454721 0.911410 0.8809315 0.9238820 0.8955088 0.8669224 0.9426444 NA 0.932663 0.9035131 0.9380271 0.9096682 0.9053362 0.943811 0.8858599 0.961363 0.936040 0.8837302 0.8533789 0.9191830 0.836914 0.7785547 0.9513208 0.928080 0.9330148 0.9399362 0.7828819 0.7764295 0.7101142 0.98232829 0.8681811 0.93298566 0.9349140 0.9337348 0.91611031 0.9491597 0.9449465 2 0.898731 0.924829 -2.7165e-02 9 0.908173 0.932974 -0.0248007 0.99632837 0.0015498 weaklyHypometh 1.00000 0.25830 insignificant 0.8637487 0.0127602 weaklyHypometh 1 1.00000 insignificant 0.00233321 0.91999693 insignificant 1.00000 insignificant 0.898731 0.8621372 0.0357810 9 0.908173 0.8869923 0.0211809 2.7574e-03 3.1429e-03 weaklyHypermeth 2.1210e-02 2.2449e-01 weaklyHypermeth 5.4825e-01 2.9891e-02 inconclusive 1.0000e+00 1.0000000 insignificant 0.00146743 9.6045e-01 insignificant 1.0000e+00 insignificant 0.898706 0.9235720 -0.01887250 9 0.897970 0.915314 -0.0173440 5.4529e-01 3.6812e-04 weaklyHypometh 1.0000e+00 0.052589 weaklyHypometh 9.5335e-01 0.00297981 weaklyHypometh 1.0000000 0.33109 insignificant -0.0208443 0.31447721 insignificant 1.000000 insignificant 0.924829 0.8621372 0.0581799 9 0.932974 0.8869923 4.5982e-02 1.3056e-02 8.6355e-01 weaklyHypermeth 9.3929e-02 1.0000e+00 weaklyHypermeth 4.6001e-01 0.5898611 insignificant 1.0000e+00 1.00000 insignificant -0.00086577 9.7978e-01 insignificant 1.0000e+00 insignificant 0.924801 0.9235720 0.00354836 9 0.925527 0.915314 0.0102124 3.7159e-01 5.2539e-01 insignificant 1.0000e+00 1.0000000 insignificant 8.7899e-01 0.21259894 insignificant 1.0000e+00 1.00000 insignificant -0.0231775 0.38850945 insignificant 1.00000 insignificant 0.8620462 0.9235720 -0.0516486 9 0.8744359 0.915314 -0.04087838 0.44115102 4.2690e-02 weaklyHypometh 1.00000 3.0493e-01 insignificant 0.5183248 2.2448e-01 insignificant 1 1.0000e+00 insignificant -0.0223117 4.9324e-01 insignificant 1.0000e+00 insignificant chr20 49462450 49463450 54988 ENSG00000219218 0.3279762 186 8 0.3933619 206 11 0.469571 205 11 0.593032 116 9 0.296284 157 10 0.587609 284 13 0.357164 199 10 0.299376 186 10 0.3280140 196 8 0.4024842 198 10 0.349859 238 10 0.3924160 170 10 0.206865 274 10 0.267857 36 4 0.2876075 223 10 0.276168 130 6 0.2540584 211 10 0.298601 115 9 0.4229657 182 7 0.356217 284 10 0.530987 140 9 0.128966 160 8 0.383556 252 10 0.404984 125 10 0.459848 69 6 0.417326 284 10 0.344063 162 10 0.400975 198 11 0.3702919 180 10 0.379611 298 11 0.1976041 273 10 0.6409523 338 11 0.0169319 282 10 0.0923025 166 6 0.0952381 200 6 0.1078431 148 13 0.056689 189 10 0.1680207 288 15 0.336786 215 8 0.3782591 213 8 0.566544 83 4 0.281329 120 6 0.313681 206 14 0.4935592 0.5418833 0.5427949 0.4886390 0.4561938 0.583991 0.5106558 0.472833 0.4020338 0.5394030 0.5716665 0.4413076 0.2813590 0.4921611 0.402722 0.4988575 0.4195030 0.3421504 0.3507279 0.360347 0.6388443 0.262290 0.483691 0.6496773 0.6262869 0.4077254 0.513913 0.5799140 0.5031424 0.386664 0.2916824 0.6256668 0.0234655 0.0902175 0.0325855 0.17040598 0.0597480 0.08420807 0.2563478 0.3360683 0.26625558 0.2561974 0.2946579 3 0.437006 0.416297 -1.4629e-02 10 0.438930 0.467166 -0.0282360 0.75330494 0.3229307 insignificant 1.00000 1.00000 insignificant 0.9084153 0.1989268 insignificant 1 1.00000 insignificant -0.02988935 0.51240600 insignificant 1.00000 insignificant 0.437006 0.0581304 0.3845243 10 0.438930 0.0677096 0.3712208 1.3021e-36 1.0000e+00 hypermethylated 7.2340e-35 1.0000e+00 hypermethylated 1.8228e-14 1.0000e+00 hypermethylated 1.5190e-12 1.0000000 hypermethylated 0.26887011 8.2486e-08 hypermethylated 3.2994e-06 hypermethylated 0.436776 0.3045564 0.18064331 7 0.415829 0.322387 0.0934414 5.7452e-07 9.9826e-01 weaklyHypermeth 7.1815e-05 1.000000 weaklyHypermeth 4.0449e-04 0.99866536 weaklyHypermeth 0.0302566 1.00000 weaklyHypermeth -0.0169454 0.76973628 insignificant 1.000000 insignificant 0.416297 0.0581304 0.3970061 10 0.467166 0.0677096 3.9946e-01 4.6906e-26 1.0000e+00 hypermethylated 2.0394e-24 1.0000e+00 hypermethylated 2.4328e-13 1.0000000 hypermethylated 2.2117e-11 1.00000 hypermethylated 0.29875945 4.9780e-06 hypermethylated 1.5592e-04 hypermethylated 0.416297 0.3052885 0.19213205 7 0.467166 0.340298 0.1268686 1.1466e-04 9.9677e-01 weaklyHypermeth 4.9854e-03 1.0000000 weaklyHypermeth 1.1204e-03 0.99854834 weaklyHypermeth 7.6074e-02 1.00000 weaklyHypermeth 0.0129439 0.84287534 insignificant 1.00000 insignificant 0.0581304 0.3052885 -0.2504364 8 0.0677096 0.340298 -0.27258818 1.00000000 1.3609e-13 hypomethylated 1.00000 7.5604e-12 hypomethylated 1.0000000 1.2979e-06 hypomethylated 1 7.2107e-05 hypomethylated -0.2858155 2.7244e-03 weaklyHypometh 6.4866e-02 weaklyHypometh chr20 49542050 49543050 54997 ENSG00000219218 0.6521842 204 11 0.6055463 178 13 0.505345 90 9 0.735246 255 13 0.686580 39 5 0.728902 243 13 0.591667 34 2 0.792197 135 9 0.5851204 76 9 0.7574263 75 8 0.746653 259 13 0.5138889 34 1 0.793213 175 12 0.946429 23 2 0.7667353 119 12 0.906250 22 0 0.7187500 25 0 0.643161 276 12 0.8182670 181 11 0.610421 196 13 0.757875 89 9 0.577566 219 13 0.688608 165 13 0.714286 63 6 0.895370 111 11 0.871831 260 13 0.621729 163 11 0.553030 31 1 0.7240245 166 11 0.836097 290 11 0.8041970 257 13 0.6507946 300 13 0.0536154 188 13 0.0573052 256 13 0.2178990 269 5 0.1887591 160 10 0.134094 126 12 0.1663670 344 13 0.519573 180 13 0.6302615 363 13 0.584474 207 11 0.472343 217 11 0.474714 281 13 0.7688405 0.5673987 0.5468944 0.7470729 0.5489675 0.843776 0.6134422 0.826654 0.6260299 0.8191980 0.7964336 0.5339092 0.7765095 0.7704362 0.740743 0.8751138 0.8213190 0.6656748 0.8341464 0.698500 0.7549953 0.559802 0.792235 0.8067227 0.8688421 0.8880305 0.710410 0.5671687 0.7244056 0.795742 0.8062020 0.7484380 0.0482080 0.0673210 0.1884919 0.11057913 0.0826326 0.17538433 0.5675818 0.7060082 0.57491637 0.4641291 0.4589012 1 0.721548 0.765263 -3.6944e-02 12 0.696494 0.633372 0.0631219 0.95292284 0.0270647 weaklyHypometh 1.00000 0.90156 insignificant 0.9327481 0.0909893 insignificant 1 1.00000 insignificant -0.01941832 0.64716460 insignificant 1.00000 insignificant 0.721442 0.1206255 0.6065368 12 0.676260 0.1177459 0.5585138 1.8825e-78 1.0000e+00 hypermethylated 6.2749e-76 1.0000e+00 hypermethylated 3.8193e-26 1.0000e+00 hypermethylated 7.6386e-24 1.0000000 hypermethylated 0.56885914 2.7021e-10 hypermethylated 2.0786e-08 hypermethylated 0.721505 0.5368590 0.18076843 12 0.676945 0.517505 0.1594404 1.1789e-10 1.0000e+00 weaklyHypermeth 5.8947e-08 1.000000 weaklyHypermeth 1.1820e-06 0.99999977 weaklyHypermeth 0.0005910 1.00000 weaklyHypermeth 0.1689257 0.00174012 weaklyHypermeth 0.110136 insignificant 0.767078 0.1206255 0.6468232 13 0.675596 0.1177459 5.5785e-01 1.7735e-62 1.0000e+00 hypermethylated 2.9558e-60 1.0000e+00 hypermethylated 4.4444e-22 1.0000000 hypermethylated 8.8888e-20 1.00000 hypermethylated 0.58827746 6.0887e-10 hypermethylated 6.7652e-08 hypermethylated 0.767806 0.5368590 0.22074784 13 0.723853 0.517505 0.2063487 3.7901e-14 9.9998e-01 hypermethylated 3.7901e-11 1.0000000 hypermethylated 1.5960e-08 0.99999845 hypermethylated 1.5960e-05 1.00000 hypermethylated 0.1883440 0.00120748 weaklyHypermeth 0.20125 insignificant 0.1204188 0.5368590 -0.4036463 13 0.1142516 0.517505 -0.40325298 1.00000000 8.7703e-26 hypomethylated 1.00000 1.0963e-23 hypomethylated 1.0000000 2.3686e-12 hypomethylated 1 4.7372e-10 hypomethylated -0.3999334 7.1759e-06 hypomethylated 1.1960e-03 hypomethylated chr20 49800750 49801750 55017 ENSG00000215444 0.801493 213 6 0.734007 105 6 0.672660 103 6 0.822756 154 6 0.819444 39 4 0.665173 253 6 0.8591394 75 6 0.7396940 90 6 0.801061 74 6 0.747286 70 6 0.8204194 157 6 0.6936508 53 5 0.6961508 92 6 0.812500 16 2 0.863119 96 6 0.7102273 48 5 0.689683 37 5 0.7919103 125 6 0.7966142 147 6 0.895305 181 6 0.8261905 39 5 0.7924145 58 6 0.697039 103 6 0.865385 45 4 0.916667 27 3 0.8452868 111 6 0.7732744 66 4 0.907937 37 4 0.804410 113 6 0.7493013 131 6 0.731687 106 6 0.858120 279 6 0.7266480 100 4 0.6590188 78 6 0.645197 120 6 0.917000 51 4 0.666603 71 6 0.7125604 142 5 0.8943435 178 6 0.9071866 219 6 0.8492244 148 6 0.840937 208 6 0.900905 182 6 0.8400235 0.7637247 0.722925 0.854877 0.84722222 0.803868 0.8827947 0.8253820 0.824547 0.870624 0.888343 0.8268199 0.7740102 0.818564 0.903938 0.8279127 0.704310 0.8371479 0.83560268 0.888625 0.824808 0.8131005 0.748895 0.923961 0.951149 0.8779711 0.8325511 0.887867 0.824096 0.8034334 0.798747 0.855228 0.77759631 0.7452107 0.76797246 8.6643e-01 0.810477 0.8390874 0.9282807 0.9249972 0.883950 0.8539533 0.9090920 3 0.816259 0.821525 -0.00601198 6 0.711318 0.831109 -0.11979080 8.3348e-01 0.05071687 insignificant 1.0000e+00 1.000000 insignificant 7.9907e-01 0.11475780 insignificant 1.0000e+00 1.00000 insignificant -0.0423614 0.1045474 insignificant 1 insignificant 0.816259 0.7740214 3.7220e-02 6 0.711318 0.6565468 5.4771e-02 4.1130e-02 9.5642e-01 weaklyHypermeth 2.8366e-01 1.0000e+00 insignificant 1.4579e-01 8.9471e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.05044344 2.9257e-01 insignificant 1.0000e+00 insignificant 0.816259 0.885561 -0.07475663 6 0.711318 0.892115 -0.18079681 1.0000e+00 9.1363e-05 weaklyHypometh 1.0000e+00 1.1420e-02 weaklyHypometh 1.0000e+00 9.6086e-04 weaklyHypometh 1.0000e+00 7.3912e-02 weaklyHypometh -0.10690483 1.1307e-04 weaklyHypometh 0.01615247 weaklyHypometh 0.821525 0.7740214 0.0427881 6 0.831109 0.6565468 0.1745623 8.3268e-02 9.9701e-01 insignificant 5.5151e-01 1.0000e+00 insignificant 3.1248e-02 9.8837e-01 weaklyHypermeth 3.1563e-01 1.0000e+00 insignificant 0.0928048 8.0060e-02 insignificant 8.6086e-01 insignificant 0.821525 0.8855615 -0.07055902 6 0.831109 0.892115 -0.0610060 9.9998e-01 1.9358e-03 weaklyHypometh 1.0000e+00 1.6132e-01 insignificant 9.9915e-01 1.3694e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0645435 0.01780370 weaklyHypometh 0.501614 insignificant 0.7740214 0.8855615 -0.11914317 6 0.6565468 0.8921151 -0.2355683 9.9999e-01 4.2996e-04 weaklyHypometh 1.0000e+00 6.3230e-03 weaklyHypometh 0.99739330 1.8418e-04 weaklyHypometh 1.00000 6.8216e-03 weaklyHypometh -0.15734826 1.0861e-02 weaklyHypometh 2.0887e-01 insignificant chr20 51828050 51829050 55114 ZNF217 ENSG00000171940 0.742257 165 7 0.650035 274 7 0.778330 120 7 0.661199 141 7 0.796381 130 7 0.704807 239 7 0.6838023 121 7 0.6813350 150 7 0.774715 125 4 0.764138 131 7 0.7403340 263 7 0.7571429 54 6 0.7758577 105 7 0.645204 93 6 0.839636 152 7 0.7013605 83 7 0.855687 129 3 0.7709198 155 7 0.8120130 107 7 0.789627 153 7 0.8095238 49 6 0.8035828 69 4 0.853601 98 6 0.585819 98 7 0.743669 62 7 0.8509190 168 6 0.6945697 109 7 0.738295 60 5 0.771645 121 6 0.7668454 216 7 0.725019 207 7 0.814173 186 7 0.6602608 143 7 0.7732897 106 7 0.610585 120 5 0.650000 21 2 0.749055 167 7 0.7718050 156 7 0.7478167 183 7 0.7152418 138 7 0.7644032 144 7 0.732804 79 4 0.717665 148 7 0.8131303 0.7031065 0.796879 0.753555 0.82040069 0.787733 0.7083368 0.7843094 0.794282 0.787305 0.833309 0.7797788 0.7963742 0.835270 0.860143 0.7292936 0.882285 0.7926990 0.84041361 0.820529 0.837480 0.7943925 0.858989 0.782832 0.758461 0.8598967 0.7490399 0.783205 0.804718 0.7975342 0.825394 0.840566 0.71729482 0.8153599 0.81405496 7.7184e-01 0.848628 0.7957204 0.8361378 0.8077916 0.862485 0.7541689 0.7622059 5 0.814533 0.835759 -0.02375152 7 0.694925 0.694657 0.00026786 9.7670e-01 0.15483138 insignificant 1.0000e+00 1.000000 insignificant 9.4184e-01 0.49590871 insignificant 1.0000e+00 1.00000 insignificant -0.0168994 0.5152566 insignificant 1 insignificant 0.814533 0.7784011 1.4317e-02 7 0.694925 0.6211861 7.3739e-02 1.1238e-02 4.6259e-01 weaklyHypermeth 8.5138e-02 1.0000e+00 weaklyHypermeth 1.0085e-01 2.8773e-01 insignificant 8.1331e-01 1.0000e+00 insignificant 0.04373993 2.1105e-01 insignificant 1.0000e+00 insignificant 0.814533 0.858382 -0.02347483 7 0.694925 0.727224 -0.03229951 9.9060e-01 3.0251e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4435e-01 7.8775e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01065286 5.2784e-01 insignificant 1.00000000 insignificant 0.835759 0.7784011 0.0341939 7 0.694657 0.6211861 0.0734710 1.4179e-03 8.6351e-01 weaklyHypermeth 1.4038e-02 1.0000e+00 weaklyHypermeth 7.7777e-02 7.6558e-01 insignificant 6.4279e-01 1.0000e+00 insignificant 0.0606393 1.2103e-01 insignificant 1.0000e+00 insignificant 0.835759 0.8583815 0.00189067 7 0.694657 0.727224 -0.0325674 8.8543e-01 7.1789e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.8672e-01 8.7579e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0275522 0.25863095 insignificant 1.000000 insignificant 0.7784011 0.8583815 -0.04258429 7 0.6211861 0.7272245 -0.1060384 3.3770e-01 2.6070e-02 weaklyHypometh 1.0000e+00 2.2670e-01 insignificant 0.35748214 3.1063e-01 insignificant 1.00000 1.0000e+00 insignificant -0.03308707 3.1678e-01 insignificant 1.0000e+00 insignificant chr20 51964850 51965850 55130 ENSG00000149617 0.102857 331 9 0.000000 189 9 0.021164 152 9 0.014336 413 9 0.018783 204 9 0.124470 426 9 0.0038314 303 9 0.0098814 198 9 0.000000 78 7 0.011364 60 6 0.0153240 363 9 0.0432099 100 6 0.0185185 39 4 0.013889 67 7 0.000000 110 9 0.0000000 53 6 NA 0 0 0.0747417 256 9 0.0000000 26 4 0.000000 284 9 0.0277778 78 8 0.0000000 28 3 0.030159 74 9 0.000000 113 9 0.102593 85 3 0.0043127 395 9 0.0273086 208 9 0.020000 20 1 0.083333 34 5 0.0137253 382 9 0.022768 282 9 0.012150 409 9 0.0034483 193 9 0.0000000 192 9 0.027778 291 6 0.000000 32 3 0.018419 170 9 0.0106512 300 9 0.0527108 611 9 0.0105244 534 9 0.0074074 394 9 0.125000 44 4 0.015795 554 9 0.0037594 0.0000000 0.016708 0.012807 0.02224311 0.030655 0.0045372 0.0081825 0.000000 0.016447 0.019818 0.0453216 0.0453216 0.010965 0.000000 0.0000000 NA 0.0252293 0.00076129 0.000000 0.013158 0.0000000 0.045739 0.000000 0.114386 0.0054145 0.0235227 0.026316 0.079805 0.0104529 0.022751 0.010299 0.00302480 0.0000000 0.03289474 6.0496e-04 0.025941 0.0079693 0.0093265 0.0126703 0.008772 0.0000000 0.0181348 1 0.014803 0.016144 -0.00233679 9 0.052401 0.014111 0.03829064 5.5683e-01 0.52777983 insignificant 1.0000e+00 1.000000 insignificant 8.5703e-01 0.23624191 insignificant 1.0000e+00 1.00000 insignificant -0.0038157 0.7618546 insignificant 1 insignificant 0.014556 0.0067912 6.3928e-03 9 0.112881 0.0073472 1.0553e-01 9.7985e-02 9.9623e-01 insignificant 6.0860e-01 1.0000e+00 insignificant 3.2704e-01 9.3006e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01481213 1.3334e-01 insignificant 1.0000e+00 insignificant 0.015089 0.009359 0.00434647 9 0.148074 0.068801 0.07927290 4.0609e-01 9.8552e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.8322e-01 7.0292e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01742591 4.9472e-01 insignificant 1.00000000 insignificant 0.016167 0.0067969 0.0089271 9 0.018814 0.0081636 0.0106505 8.0866e-02 9.9751e-01 insignificant 5.4639e-01 1.0000e+00 insignificant 2.7937e-01 9.9856e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0186278 9.1260e-02 insignificant 9.5063e-01 insignificant 0.016160 0.0093677 0.00704580 9 0.016933 0.075681 -0.0587486 2.9327e-01 1.7982e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.9408e-01 6.0571e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0136102 0.59430798 insignificant 1.000000 insignificant 0.0067912 0.0084349 -0.00086443 9 0.0073472 0.0090146 -0.0016674 9.6223e-01 4.8060e-02 weaklyHypometh 1.0000e+00 3.6687e-01 insignificant 0.99201287 4.0557e-01 insignificant 1.00000 1.0000e+00 insignificant -0.03223804 2.2306e-01 insignificant 1.0000e+00 insignificant chr20 51985450 51986450 55134 ENSG00000149617 0.614391 290 5 0.653312 230 5 0.740365 108 5 0.814546 199 5 0.802652 84 5 0.744017 429 5 0.6057101 129 5 0.6225805 144 5 0.695514 97 5 0.696192 88 5 0.8161100 232 5 0.6936508 88 5 0.5418981 90 5 0.904762 12 1 0.646806 99 5 0.7515152 47 4 0.669154 143 5 0.7128803 195 5 0.7190828 206 5 0.742291 326 5 0.6645604 46 4 0.7561772 45 4 0.761905 149 5 0.779834 61 4 0.745596 151 5 0.7643544 283 5 0.7693939 57 3 0.487013 52 3 0.780137 163 5 0.6648573 221 5 0.819427 234 6 0.740493 362 5 0.6358457 173 6 0.7462877 130 5 0.533405 141 5 0.761925 101 5 0.693651 144 6 0.7409251 242 5 0.7823911 345 5 0.8253182 260 5 0.6881981 293 5 0.755591 309 5 0.793178 247 5 0.7936102 0.7120433 0.642058 0.817109 0.76764947 0.769309 0.7576852 0.7589096 0.806829 0.754685 0.794656 0.6789483 0.6970453 0.761093 0.753813 0.8204048 0.728316 0.7654270 0.78842433 0.794122 0.704957 0.7487989 0.760039 0.782906 0.735175 0.7410983 0.7696794 0.782380 0.798716 0.7845791 0.764166 0.786077 0.63248097 0.7287857 0.57921242 7.8750e-01 0.685543 0.7382016 0.7885292 0.8145088 0.765968 0.7697562 0.8201607 4 0.772559 0.797475 -0.01308988 5 0.730746 0.726405 0.00434035 9.1796e-01 0.35295179 insignificant 1.0000e+00 1.000000 insignificant 9.5923e-01 0.44226303 insignificant 1.0000e+00 1.00000 insignificant -0.0184408 0.5678622 lowCoverage 1 lowCoverage 0.772995 0.7561762 3.4422e-02 5 0.725932 0.6475862 7.8346e-02 5.0520e-03 5.3410e-01 weaklyHypermeth 4.2424e-02 1.0000e+00 weaklyHypermeth 9.6982e-02 9.0438e-01 insignificant 7.9051e-01 1.0000e+00 insignificant 0.02403151 5.6929e-01 lowCoverage 1.0000e+00 lowCoverage 0.772995 0.837689 -0.03675019 5 0.725932 0.809771 -0.08383845 9.8339e-01 3.2211e-02 weaklyHypometh 1.0000e+00 7.3206e-01 insignificant 9.8929e-01 7.7415e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.05956391 7.3947e-02 lowCoverage 0.84882288 lowCoverage 0.798347 0.7561762 0.0479584 5 0.772590 0.6475862 0.1250037 2.1744e-03 9.6161e-01 weaklyHypermeth 2.0908e-02 1.0000e+00 weaklyHypermeth 4.7965e-02 9.9851e-01 weaklyHypermeth 4.2826e-01 1.0000e+00 insignificant 0.0424723 3.5513e-01 lowCoverage 1.0000e+00 lowCoverage 0.798347 0.8376891 -0.02185100 5 0.772590 0.809771 -0.0371806 6.2557e-01 5.1861e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 7.6781e-01 2.3429e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0411231 0.25270124 lowCoverage 1.000000 lowCoverage 0.7561762 0.8376891 -0.06959127 5 0.6475862 0.8097705 -0.1621843 7.7685e-01 2.3242e-02 weaklyHypometh 1.0000e+00 2.0752e-01 insignificant 0.97091611 6.5214e-02 insignificant 1.00000 5.9829e-01 insignificant -0.08359542 8.3782e-02 insignificant 9.0088e-01 insignificant chr20 52115750 52116750 55142 ENSG00000149617 0.800482 197 6 0.564286 104 6 0.612702 100 6 0.701257 157 6 0.833511 92 6 0.798538 274 6 0.8215326 86 6 0.5352648 124 6 0.760213 78 6 0.781078 110 6 0.6694146 233 6 0.6733092 67 3 0.7651121 125 6 0.417735 29 2 0.655702 105 6 0.6444444 59 3 0.645455 53 5 0.8216281 151 6 0.7671736 154 6 0.745136 248 6 0.6524170 54 4 0.7463078 71 4 0.641903 138 6 0.737485 47 4 0.692857 50 5 0.6836448 156 6 0.7291887 81 4 0.544741 44 4 0.710667 136 6 0.7638498 195 6 0.621850 171 6 0.714569 295 6 0.4887612 121 6 0.6596650 120 6 0.736332 153 6 0.737169 51 5 0.650182 83 6 0.6681063 200 6 0.8333938 189 6 0.6916133 219 6 0.8212223 179 6 0.607422 175 6 0.856761 186 6 0.8173334 0.6756536 0.663447 0.846988 0.77728197 0.721439 0.8175105 0.7069564 0.760483 0.775684 0.826929 0.7469274 0.8582593 0.781334 0.764883 0.7778322 0.797014 0.8545640 0.80260431 0.796968 0.704880 0.8540400 0.793259 0.821517 0.799265 0.8241740 0.7617362 0.714367 0.772603 0.7540082 0.752395 0.810060 0.69440429 0.7217105 0.74978538 7.3499e-01 0.787067 0.7769807 0.8468558 0.8507896 0.805414 0.7235863 0.8266431 4 0.764961 0.776078 -0.01041835 6 0.727513 0.692970 0.03454308 7.2786e-01 0.47525868 insignificant 1.0000e+00 1.000000 insignificant 8.0948e-01 0.87171053 insignificant 1.0000e+00 1.00000 insignificant 0.0140754 0.6480111 insignificant 1 insignificant 0.764961 0.7376374 2.4764e-02 6 0.727513 0.6200654 1.0745e-01 1.2657e-01 9.5122e-01 insignificant 7.4894e-01 1.0000e+00 insignificant 2.7631e-01 9.8977e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.04399613 3.4642e-01 insignificant 1.0000e+00 insignificant 0.765631 0.812236 -0.04674928 6 0.755291 0.837794 -0.08250279 9.9990e-01 1.9993e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.0000e+00 1.6469e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.06138379 2.9815e-01 insignificant 1.00000000 insignificant 0.776078 0.7376374 0.0339399 6 0.692970 0.6200654 0.0729047 2.0751e-01 9.9890e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.8116e-01 9.9014e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0299208 4.8992e-01 insignificant 1.0000e+00 insignificant 0.776618 0.8118393 -0.03378430 6 0.755967 0.823048 -0.0670803 9.9907e-01 3.8063e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9998e-01 4.9358e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0754592 0.20055243 insignificant 1.000000 insignificant 0.7369146 0.8118393 -0.07142788 6 0.5855259 0.8230478 -0.2375218 9.9956e-01 3.4683e-02 weaklyHypometh 1.0000e+00 2.7746e-01 insignificant 0.99999361 6.8394e-02 insignificant 1.00000 6.0526e-01 insignificant -0.10537992 1.2162e-01 insignificant 1.0000e+00 insignificant chr20 52299750 52300750 55158 PFDN4 ENSG00000101132 0.921387 608 22 0.845215 828 23 0.830116 1619 24 0.909745 354 15 0.859086 1381 19 0.883781 597 24 0.8522769 2065 19 0.8677352 793 20 0.845111 940 19 0.870384 1125 19 0.9119096 2633 20 0.8522588 1549 19 0.8808847 1250 19 0.884538 119 4 0.904481 1995 19 0.7299550 917 12 0.868286 938 19 0.8840259 450 15 0.9087500 1905 19 0.895377 563 22 0.9217033 279 11 0.7460713 156 6 0.888342 797 21 0.767968 270 11 0.915393 119 9 0.8562457 813 22 0.7695715 380 11 0.944616 114 13 0.869545 541 19 0.8965842 747 23 0.879721 667 22 0.889663 758 24 0.8470605 698 24 0.7567366 1193 19 0.783667 534 23 0.740915 129 13 0.754019 355 15 0.8089254 574 18 0.8917518 724 19 0.9315207 586 20 0.9093653 357 15 0.932253 462 16 0.929976 533 17 0.9261571 0.8561840 0.829826 0.929097 0.90284731 0.907772 0.8472823 0.8780907 0.843279 0.886287 0.920305 0.8740270 0.9214397 NA 0.907371 0.7103916 0.928040 0.8809045 0.91423837 0.891295 0.895653 0.7304335 0.865358 0.878673 0.865100 0.8785981 0.8556741 0.935212 0.865322 0.8983557 0.887263 0.905317 0.86187703 0.7979238 0.81791542 7.4960e-01 0.778427 0.7869961 0.9132515 0.9297617 0.916062 0.9147559 0.9337652 8 0.896416 0.885638 0.00592805 19 0.880575 0.892491 -0.01191635 5.5614e-01 0.20158921 insignificant 1.0000e+00 1.000000 insignificant 9.3096e-01 0.07991242 insignificant 1.0000e+00 1.00000 insignificant 0.0081465 0.7041230 insignificant 1 insignificant 0.896416 0.8110824 8.5667e-02 19 0.880575 0.8040532 7.6521e-02 6.8024e-27 1.0000e+00 weaklyHypermeth 3.2392e-25 1.0000e+00 weaklyHypermeth 1.1155e-12 1.0000e+00 weaklyHypermeth 1.1155e-10 1.0000e+00 weaklyHypermeth 0.08837782 1.3244e-03 weaklyHypermeth 3.0100e-02 weaklyHypermeth 0.896416 0.908715 -0.02693086 17 0.880575 0.917667 -0.03709275 9.9989e-01 1.3580e-06 weaklyHypometh 1.0000e+00 3.3949e-04 weaklyHypometh 9.9999e-01 1.8321e-04 weaklyHypometh 1.0000e+00 2.6173e-02 weaklyHypometh -0.04870820 1.1374e-03 weaklyHypometh 0.08124144 weaklyHypometh 0.885638 0.8110824 0.0793168 19 0.892491 0.8040532 0.0884377 4.4720e-20 1.0000e+00 weaklyHypermeth 1.9444e-18 1.0000e+00 weaklyHypermeth 4.0402e-10 1.0000e+00 weaklyHypermeth 2.9754e-08 1.0000e+00 weaklyHypermeth 0.0802313 5.8665e-03 weaklyHypermeth 1.0864e-01 insignificant 0.885638 0.9087153 -0.03208659 17 0.892491 0.917667 -0.0251764 9.9943e-01 1.0319e-03 weaklyHypometh 1.0000e+00 1.1465e-01 insignificant 9.9989e-01 6.9330e-03 weaklyHypometh 1.0000e+00 7.3066e-01 insignificant -0.0568547 0.01500050 weaklyHypometh 0.501614 insignificant 0.8110824 0.9087153 -0.10639466 19 0.8040532 0.9176673 -0.1136141 1.0000e+00 1.7538e-19 weaklyHypometh 1.0000e+00 1.9486e-17 weaklyHypometh 1.00000000 2.4156e-13 weaklyHypometh 1.00000 1.2078e-10 weaklyHypometh -0.13708602 1.2111e-04 weaklyHypometh 1.0092e-02 weaklyHypometh chr20 54455550 54456550 55183 CASS4 ENSG00000087589 0.770327 275 9 0.731957 142 9 0.624811 128 9 0.872681 158 9 0.777601 105 9 0.826718 360 9 0.7002381 128 8 0.8085578 137 9 0.702311 127 9 0.781108 111 9 0.6961480 318 9 0.8047619 49 4 0.8230769 128 9 0.793537 59 2 0.832687 152 9 0.3925689 54 4 0.926808 47 4 0.8428488 161 9 0.7874448 205 9 0.699248 222 9 0.7032828 44 2 0.8407407 80 9 0.763636 162 9 0.856125 90 9 0.850353 52 6 0.8002818 224 9 0.7949856 84 5 0.700000 36 4 0.720195 134 9 0.8002122 207 9 0.701786 214 9 0.795623 394 9 0.4905206 178 9 0.7581818 113 8 0.728782 171 9 0.693401 70 3 0.797641 95 9 0.6943512 253 9 0.6810280 252 9 0.8105652 275 9 0.7864869 214 9 0.877836 168 9 0.819090 203 9 0.8013281 0.7513352 0.704932 0.877129 0.81971045 0.809763 0.7442439 0.8185204 0.761562 0.784636 0.781512 0.8788141 0.8828121 0.826946 0.856951 0.5434160 0.878191 0.8299729 0.78949002 0.869391 0.853378 0.8492470 0.834944 0.876632 0.866547 0.8268750 0.7379935 0.832112 0.869462 0.8079186 0.794906 0.808794 0.68866580 0.7811164 0.76967504 7.0178e-01 0.832438 0.7444724 0.8725853 0.8382269 0.810426 0.8936144 0.8480487 4 0.805284 0.811156 -0.00946044 9 0.725226 0.721067 0.00415837 8.0863e-01 0.43528582 insignificant 1.0000e+00 1.000000 insignificant 9.0622e-01 0.21185858 insignificant 1.0000e+00 1.00000 insignificant -0.0174965 0.5663956 insignificant 1 insignificant 0.805284 0.7318182 6.5403e-02 9 0.725226 0.6198709 1.0535e-01 1.6216e-03 9.9999e-01 weaklyHypermeth 1.5299e-02 1.0000e+00 weaklyHypermeth 1.2252e-02 9.9997e-01 weaklyHypermeth 1.4414e-01 1.0000e+00 insignificant 0.06595927 2.2466e-01 insignificant 1.0000e+00 insignificant 0.805356 0.851619 -0.04204265 9 0.722973 0.674428 0.04854581 9.6067e-01 6.4899e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4198e-01 9.0485e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03522940 4.0857e-01 insignificant 1.00000000 insignificant 0.811156 0.7318182 0.0760479 9 0.721067 0.6198709 0.1011964 9.8171e-05 9.9998e-01 weaklyHypermeth 1.2120e-03 1.0000e+00 weaklyHypermeth 3.9551e-04 9.9995e-01 weaklyHypermeth 6.7036e-03 1.0000e+00 weaklyHypermeth 0.0834558 1.2159e-01 insignificant 1.0000e+00 insignificant 0.811409 0.8516187 -0.03170895 9 0.726013 0.674428 0.0515852 8.7700e-01 1.4098e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.1362e-01 6.5184e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0177329 0.64243872 insignificant 1.000000 insignificant 0.7323462 0.8516187 -0.10740820 9 0.6307682 0.6744276 -0.0436594 9.9999e-01 4.4892e-08 weaklyHypometh 1.0000e+00 1.5480e-06 weaklyHypometh 0.99998978 1.3742e-03 weaklyHypometh 1.00000 2.8629e-02 weaklyHypometh -0.10118867 9.6661e-02 insignificant 9.9650e-01 insignificant chr20 55418050 55419050 55191 RBM38 ENSG00000132819 0.653968 86 5 0.510410 69 4 0.274359 24 2 0.705051 93 5 0.786667 21 2 0.726492 155 5 0.7254545 33 5 0.6654762 47 5 0.666667 24 2 0.811508 27 2 0.9057143 147 5 0.4083333 21 1 0.6750916 42 2 0.888889 17 3 0.605714 35 3 0.4000000 9 0 0.213235 21 1 0.5276423 101 3 0.7619746 76 5 0.593457 128 5 0.7245098 47 5 0.2313682 60 2 0.739815 52 5 0.645833 35 4 0.489524 29 3 0.6354697 124 5 0.5166667 42 4 0.625397 22 2 0.813971 66 4 0.6955187 102 5 0.685986 124 4 0.863859 163 5 0.6071429 67 5 0.7000000 29 4 0.870000 113 4 0.280112 58 2 0.717749 47 5 0.3164641 145 5 0.2499334 110 5 0.3194926 135 5 0.1600000 102 5 0.000000 68 2 0.479066 105 5 0.6316366 0.4459172 0.385057 0.572449 0.77816092 0.802919 0.7168234 0.5695813 0.655172 0.780378 0.854680 0.2586207 0.5155993 0.621409 0.476601 0.4942529 0.351290 0.4665896 0.65379883 0.576517 0.692867 0.3741466 0.831801 0.556958 0.497044 0.6951523 0.5275862 0.684565 0.733456 0.6025753 0.636201 0.860192 0.62438424 0.8649425 0.70862069 3.7693e-01 0.801985 0.2797509 0.1718557 0.1965563 0.113793 0.0000000 0.3371445 1 0.666667 0.707176 -0.02941389 5 0.791596 0.584982 0.20661405 8.3796e-01 0.73943132 insignificant 1.0000e+00 1.000000 insignificant 8.7209e-01 0.58674004 insignificant 1.0000e+00 1.00000 insignificant -0.0136879 0.8326179 lowCoverage 1 lowCoverage 0.666097 0.5490196 1.3390e-01 5 0.708234 0.5701149 1.3812e-01 4.5130e-03 9.9842e-01 weaklyHypermeth 3.8905e-02 1.0000e+00 weaklyHypermeth 2.0635e-01 9.0420e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.04339386 6.9178e-01 lowCoverage 1.0000e+00 lowCoverage 0.666097 0.210019 0.41602000 5 0.708234 0.311127 0.39710754 2.8774e-15 1.0000e+00 hypermethylated 4.1105e-13 1.0000e+00 hypermethylated 3.7185e-08 1.0000e+00 hypermethylated 8.4024e-06 1.0000e+00 hypermethylated 0.38360666 4.6030e-03 lowCoverage 0.21164616 lowCoverage 0.709302 0.5490196 0.1709903 5 0.718975 0.5701149 0.1488597 6.8549e-03 9.9635e-01 weaklyHypermeth 6.0131e-02 1.0000e+00 weaklyHypermeth 1.7129e-01 9.5149e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0570818 6.1097e-01 lowCoverage 1.0000e+00 lowCoverage 0.708479 0.2096154 0.42997738 5 0.599146 0.259272 0.3398732 1.0240e-11 1.0000e+00 hypermethylated 1.2800e-09 1.0000e+00 hypermethylated 7.8148e-08 1.0000e+00 hypermethylated 1.9537e-05 1.0000e+00 hypermethylated 0.3972946 0.00362434 lowCoverage 0.278795 lowCoverage 0.5490196 0.2100193 0.27290388 5 0.5701149 0.3111267 0.2589882 7.1482e-04 9.9955e-01 hypermethylated 1.1914e-01 1.0000e+00 insignificant 0.00028062 1.0000e+00 hypermethylated 0.28062 1.0000e+00 insignificant 0.34021280 2.3671e-02 lowCoverage 3.4759e-01 lowCoverage chr20 55429350 55430350 55193 RBM38 ENSG00000132819 0.684714 248 6 0.822592 469 6 0.813593 232 7 0.882011 265 8 0.775169 145 5 0.669054 502 8 0.8261328 210 7 0.8339793 184 7 0.768418 138 5 0.914178 142 5 0.8593700 420 8 0.7982769 67 7 0.8772718 142 5 0.889250 82 5 0.867329 176 5 0.8906250 26 2 0.645833 21 2 0.6951519 299 6 0.8210001 342 8 0.704728 335 6 0.8016436 141 7 0.7465517 54 2 0.710807 223 7 0.893438 153 7 0.894118 89 5 0.8799199 407 9 0.7629336 132 5 0.879377 78 5 0.889485 301 6 0.6965188 478 9 0.703699 504 9 0.914085 356 8 0.3613535 303 6 0.5781030 207 5 0.398819 554 8 0.401153 164 7 0.517868 191 8 0.4747401 475 9 0.6183126 371 8 0.7565662 308 9 0.7381154 246 7 0.695426 261 5 0.616151 269 8 0.7673409 0.6730123 0.735789 0.837535 0.74034863 0.844797 0.8088311 0.7908915 0.730673 0.845342 0.829823 0.8202441 0.7915693 0.833445 0.793919 0.7328179 0.533058 0.7073473 0.75675780 0.747347 0.784651 0.6554011 0.792660 0.806061 0.833955 0.7471557 0.6999802 0.837258 0.820634 0.6609139 0.727147 0.882367 0.44962069 0.4225940 0.55194526 4.4672e-01 0.497404 0.3628047 0.6807982 0.7612434 0.713375 0.7011037 0.6859147 4 0.782403 0.811191 -0.01401901 5 0.670321 0.793919 -0.12359775 9.9259e-01 0.20495728 insignificant 1.0000e+00 1.000000 insignificant 9.5331e-01 0.67330149 insignificant 1.0000e+00 1.00000 insignificant -0.0124476 0.6904963 insignificant 1 insignificant 0.783266 0.4490227 3.2050e-01 5 0.774714 0.4242370 3.5048e-01 1.3676e-24 1.0000e+00 hypermethylated 5.9463e-23 1.0000e+00 hypermethylated 6.1573e-11 1.0000e+00 hypermethylated 3.6219e-09 1.0000e+00 hypermethylated 0.34659431 1.5658e-05 hypermethylated 6.8080e-04 hypermethylated 0.783089 0.696699 0.06836035 5 0.715120 0.632766 0.08235416 1.0884e-04 6.4418e-01 weaklyHypermeth 3.2983e-03 1.0000e+00 weaklyHypermeth 1.2368e-03 9.0918e-01 weaklyHypermeth 4.5053e-02 1.0000e+00 weaklyHypermeth 0.11701941 1.0614e-02 weaklyHypermeth 0.36600203 insignificant 0.811490 0.4490227 0.3394100 7 0.836336 0.4242370 0.4120989 3.4728e-19 1.0000e+00 hypermethylated 1.3891e-17 1.0000e+00 hypermethylated 2.7807e-10 1.0000e+00 hypermethylated 2.3173e-08 1.0000e+00 hypermethylated 0.3590419 4.8513e-06 hypermethylated 2.4256e-04 hypermethylated 0.811061 0.6962199 0.08248887 7 0.812097 0.587568 0.2245290 1.6276e-06 9.9983e-01 weaklyHypermeth 8.5662e-05 1.0000e+00 weaklyHypermeth 4.2713e-03 9.9994e-01 weaklyHypermeth 1.4729e-01 1.0000e+00 insignificant 0.1294670 0.00721817 weaklyHypermeth 0.451135 insignificant 0.4490227 0.6971783 -0.26223049 8 0.4242370 0.6854966 -0.2612595 1.0000e+00 1.1555e-06 hypomethylated 1.0000e+00 3.2099e-05 hypomethylated 0.99999999 1.7757e-04 hypomethylated 1.00000 6.8216e-03 hypomethylated -0.22957490 6.2484e-04 hypomethylated 3.9050e-02 hypomethylated chr20 55450950 55451950 55196 RBM38 ENSG00000132819 0.801387 412 9 0.763625 261 10 0.775650 145 8 0.840539 472 9 0.767030 60 6 0.888618 457 10 0.7033333 63 9 0.8350601 227 10 0.715629 192 9 0.906769 106 7 0.8821750 335 10 0.7349206 52 5 0.8227871 242 8 0.744343 91 9 0.802246 160 7 0.3333333 19 0 0.800000 12 1 0.8637963 723 9 0.8797885 259 10 0.907205 322 9 0.5594336 129 9 0.6609940 124 7 0.917519 172 9 0.599915 77 5 0.762643 225 10 0.8075141 331 9 0.7011785 155 8 0.691116 46 3 0.875011 288 8 0.7765876 392 10 0.803983 374 10 0.900356 350 10 0.7269020 189 9 0.7427228 200 10 0.721053 359 10 0.554762 43 4 0.714173 179 10 0.7730946 331 10 0.6750979 334 9 0.6748999 443 9 0.7749004 372 8 0.691800 189 8 0.806478 365 9 0.8623608 0.7686635 0.748804 0.788543 0.88162378 0.868980 0.6350329 0.8513068 0.795397 0.896683 0.885778 0.7497923 0.8196712 0.826880 0.785885 0.6085679 0.811941 0.8310386 0.82901526 0.865682 0.749089 0.6802035 0.869440 0.835859 0.899239 0.8616144 0.7388768 0.778696 0.842925 0.8339603 0.849093 0.882530 0.84512890 0.7517618 0.87931951 7.0841e-01 0.816979 0.7105247 0.7404425 0.7498808 0.743163 0.6712178 0.7392490 3 0.868980 0.854991 0.00250987 9 0.769306 0.639186 0.13012068 6.2038e-01 0.90062145 insignificant 1.0000e+00 1.000000 insignificant 8.4120e-01 0.86267215 insignificant 1.0000e+00 1.00000 insignificant 0.0337242 0.4435493 insignificant 1 insignificant 0.868867 0.8146154 4.3346e-02 9 0.733815 0.6336010 1.0021e-01 2.6724e-02 5.0249e-01 weaklyHypermeth 1.8953e-01 1.0000e+00 insignificant 5.1363e-01 7.2301e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.08296067 6.7973e-02 insignificant 7.7242e-01 insignificant 0.869537 0.818824 0.05357984 9 0.837293 0.740293 0.09700057 7.4045e-06 8.2498e-01 weaklyHypermeth 3.0852e-04 1.0000e+00 weaklyHypermeth 4.1268e-03 9.0246e-01 weaklyHypermeth 1.2896e-01 1.0000e+00 insignificant 0.06377661 1.2675e-01 insignificant 1.00000000 insignificant 0.854772 0.8139892 0.0510089 10 0.627699 0.5883438 0.0393553 1.5134e-01 7.4265e-01 insignificant 9.2492e-01 1.0000e+00 insignificant 5.0611e-01 8.7339e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0492364 2.9881e-01 insignificant 1.0000e+00 insignificant 0.858605 0.8179683 0.05315506 9 0.745411 0.700244 0.0451671 3.1208e-05 9.5843e-01 weaklyHypermeth 1.3003e-03 1.0000e+00 weaklyHypermeth 1.2508e-03 9.9172e-01 weaklyHypermeth 5.9560e-02 1.0000e+00 weaklyHypermeth 0.0300524 0.49828060 insignificant 1.000000 insignificant 0.8169884 0.8188235 0.00183928 9 0.7736813 0.7402925 0.0333888 7.7178e-02 9.0385e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.21769965 9.7676e-01 insignificant 1.00000 1.0000e+00 insignificant -0.01918406 6.5679e-01 insignificant 1.0000e+00 insignificant chr20 55459650 55460650 55198 RBM38 ENSG00000132819 0.850216 261 9 0.796947 64 6 0.770359 129 9 0.903750 340 9 0.734127 103 7 0.819948 249 10 0.8575397 134 9 0.9210162 169 9 0.947563 89 6 0.845608 81 6 0.8763694 149 9 0.8690476 68 6 0.9308854 178 6 0.858947 43 4 0.906349 105 7 0.9432099 57 6 0.819048 17 1 0.8244751 414 7 0.9514220 104 4 0.857943 210 9 0.8795150 73 6 0.8416833 101 6 0.877884 157 10 0.907749 128 9 0.957115 65 6 0.8528297 141 9 0.7764352 184 9 0.804503 55 4 0.912077 193 6 0.9179318 202 6 0.930175 145 9 0.804649 226 10 0.7825536 136 9 0.7830072 176 9 0.810345 92 5 0.640625 38 2 0.659679 164 9 0.7563948 243 9 0.8587759 354 9 0.9297448 263 9 0.9058984 236 9 0.878925 311 6 0.901618 231 10 0.8038870 0.8901565 0.831043 0.869288 0.76147712 0.878477 0.8455791 0.9005900 0.917987 0.920286 0.886647 0.8347781 0.9292127 0.800356 0.844420 0.9062567 0.833269 0.8474052 0.91246966 0.850463 0.834858 0.8026156 0.900688 0.886308 0.915687 0.9413444 0.7309368 0.763120 0.894342 0.8870893 0.927315 0.867301 0.66830163 0.6677370 0.63951925 6.6284e-01 0.598442 0.6943775 0.8574157 0.8701048 0.866900 0.8890141 0.8722806 4 0.878214 0.865027 0.00365814 9 0.883667 0.870983 0.01268437 5.6862e-01 0.09275063 insignificant 1.0000e+00 1.000000 insignificant 7.7890e-01 0.29942987 insignificant 1.0000e+00 1.00000 insignificant -0.0076405 0.7209262 insignificant 1 insignificant 0.877933 0.7146226 1.6530e-01 9 0.833667 0.6916472 1.4202e-01 4.5139e-13 7.6582e-01 weaklyHypermeth 9.8129e-12 1.0000e+00 weaklyHypermeth 5.8121e-06 7.6703e-01 weaklyHypermeth 1.3517e-04 1.0000e+00 weaklyHypermeth 0.12547116 5.2498e-03 weaklyHypermeth 1.0096e-01 insignificant 0.877744 0.909677 -0.01174314 9 0.847501 0.899590 -0.05208960 8.8493e-01 3.1907e-02 weaklyHypometh 1.0000e+00 7.3206e-01 insignificant 9.0987e-01 4.0660e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03075390 1.0965e-01 insignificant 1.00000000 insignificant 0.865617 0.7158019 0.1765959 9 0.832094 0.7916472 0.0404470 9.5833e-09 7.8686e-01 weaklyHypermeth 2.1296e-07 1.0000e+00 weaklyHypermeth 8.0534e-05 8.4243e-01 weaklyHypermeth 1.6778e-03 1.0000e+00 weaklyHypermeth 0.1331117 3.6567e-03 weaklyHypermeth 8.1260e-02 weaklyHypermeth 0.865027 0.9111272 -0.01152355 9 0.870983 0.909508 -0.0385252 9.8120e-01 1.7625e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.8124e-01 4.6178e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0231134 0.27442796 insignificant 1.000000 insignificant 0.7146226 0.9105455 -0.17482575 9 0.6916472 0.9095083 -0.2178611 9.7882e-01 1.9519e-06 weaklyHypometh 1.0000e+00 4.8797e-05 weaklyHypometh 0.95012658 5.6305e-04 weaklyHypometh 1.00000 1.5640e-02 weaklyHypometh -0.15622505 1.8744e-03 weaklyHypometh 7.1813e-02 weaklyHypometh chr20 55472350 55473350 55200 RBM38 ENSG00000132819 0.789923 304 8 0.732305 262 8 0.708730 142 7 0.844462 318 10 0.760765 130 6 0.777728 372 10 0.6284379 132 4 0.8628537 165 8 0.744690 85 5 0.716634 113 6 0.8525499 293 10 0.7255291 56 3 0.7868047 102 7 0.652175 84 6 0.662722 110 5 0.8270803 62 2 0.875000 189 2 0.5136455 423 8 0.8898290 239 7 0.731776 276 7 0.7673160 52 6 0.4375000 17 0 0.719732 148 5 0.567302 90 7 0.758261 222 7 0.8249387 232 10 0.8470740 124 7 0.875000 30 3 0.774095 253 7 0.6251710 242 10 0.645632 242 8 0.852249 288 10 0.4125738 208 10 0.4170920 261 10 0.784814 209 8 0.742262 51 6 0.364445 221 10 0.4397148 360 10 0.5211651 376 10 0.6661285 300 10 0.5765080 359 7 0.755000 166 6 0.579540 246 8 0.7914798 0.8144712 0.789158 0.880068 0.93023085 0.889598 0.7987544 0.8483630 0.875674 0.915206 0.876618 0.8614261 0.9054535 0.844946 0.841609 0.8423825 0.933832 0.7534803 0.93400453 0.891668 0.858403 0.5745666 0.926745 0.760015 0.867377 0.8942765 0.8791566 0.922033 0.910475 0.8365665 0.895124 0.846047 0.58284808 0.5170905 0.80852508 7.5463e-01 0.632774 0.7366213 0.7854742 0.7956452 0.768547 0.8468806 0.7568653 2 0.816083 0.852425 -0.04308901 8 0.617767 0.628914 -0.01114676 9.9704e-01 0.24272498 insignificant 1.0000e+00 1.000000 insignificant 9.9381e-01 0.66967577 insignificant 1.0000e+00 1.00000 insignificant 0.0296595 0.5054261 insignificant 1 insignificant 0.816411 0.5431627 2.4665e-01 8 0.644944 0.4138541 2.3109e-01 1.3952e-22 1.0000e+00 hypermethylated 5.3966e-21 1.0000e+00 hypermethylated 5.1436e-05 1.0000e+00 hypermethylated 9.7050e-04 1.0000e+00 hypermethylated 0.22736516 2.8714e-02 weaklyHypermeth 3.9881e-01 insignificant 0.816247 0.647303 0.11484374 8 0.634591 0.572778 0.06181324 2.3280e-05 9.9996e-01 weaklyHypermeth 8.0274e-04 1.0000e+00 weaklyHypermeth 6.4625e-03 9.9903e-01 weaklyHypermeth 1.9007e-01 1.0000e+00 insignificant 0.13451377 2.5287e-02 weaklyHypermeth 0.48882127 insignificant 0.854113 0.5427481 0.3099929 8 0.694950 0.3842931 0.3106564 2.2099e-21 1.0000e+00 hypermethylated 1.0523e-19 1.0000e+00 hypermethylated 2.2025e-04 1.0000e+00 hypermethylated 4.1556e-03 1.0000e+00 hypermethylated 0.1977056 4.9529e-02 weaklyHypermeth 6.1911e-01 insignificant 0.853230 0.6473029 0.17026993 8 0.647330 0.572778 0.0745524 1.1123e-13 9.9543e-01 weaklyHypermeth 2.7807e-11 1.0000e+00 weaklyHypermeth 3.6323e-03 9.9548e-01 weaklyHypermeth 1.3790e-01 1.0000e+00 insignificant 0.1048542 0.08835134 insignificant 1.000000 insignificant 0.5431627 0.6470588 -0.12264905 8 0.4138541 0.5399148 -0.1260607 9.9361e-01 3.5959e-04 weaklyHypometh 1.0000e+00 5.3671e-03 weaklyHypometh 0.98685600 1.1861e-01 insignificant 1.00000 9.4135e-01 insignificant -0.09285138 3.1419e-01 insignificant 1.0000e+00 insignificant chr20 55478450 55479450 55201 RBM38 ENSG00000132819 0.577020 89 4 0.605060 134 6 0.648677 234 7 0.094388 41 2 0.428266 71 6 0.610084 146 7 0.5612403 235 7 0.5929273 300 7 0.523682 230 6 0.436381 181 6 0.6826008 266 7 0.6823830 174 8 0.3783493 317 7 0.150000 25 2 0.364482 295 6 0.7325214 94 6 0.632075 123 5 0.6555968 55 6 0.8306564 238 6 0.486407 159 7 0.7117884 107 6 0.1666667 29 2 0.672497 180 6 0.550798 92 7 0.125000 9 1 0.3485160 424 7 0.4498512 98 8 0.457846 64 7 0.489698 258 7 0.3467603 527 7 0.563788 335 7 0.733266 211 7 0.2356795 360 7 0.4619764 266 5 0.534286 165 5 0.141071 34 4 0.448539 130 7 0.5244982 400 7 0.4184224 167 6 0.5838068 48 6 0.4928571 21 1 0.633333 38 5 0.366213 43 4 0.5484514 0.6052437 0.657200 0.081110 0.39556173 0.569603 0.4549262 0.5781555 0.505267 0.541300 0.646047 0.6940663 0.3518309 0.475304 0.356583 0.7073732 0.655104 0.6932196 0.77316338 0.399702 0.619521 0.3297169 0.613844 0.527729 0.474457 0.3282882 0.4952198 0.323778 0.582982 0.3273589 0.567587 0.742490 0.24691171 0.5246229 0.37421687 1.9289e-01 0.403636 0.4104870 0.4332793 0.4884173 0.429518 0.5266566 0.4114553 0 0.581156 0.522279 0.06522117 7 0.562874 0.473451 0.08942309 2.7130e-02 0.99847355 weaklyHypermeth 1.0000e+00 1.000000 insignificant 2.1036e-01 0.95497589 insignificant 1.0000e+00 1.00000 insignificant 0.0656001 0.3597258 insignificant 1 insignificant 0.581156 0.3970480 1.9420e-01 7 0.562874 0.3283481 2.3453e-01 2.4948e-08 1.0000e+00 weaklyHypermeth 3.7800e-07 1.0000e+00 weaklyHypermeth 1.7956e-04 9.9992e-01 weaklyHypermeth 3.2065e-03 1.0000e+00 weaklyHypermeth 0.14263143 1.0127e-01 insignificant 1.0000e+00 insignificant 0.581156 0.488959 0.07432499 6 0.562874 0.533108 0.02976599 1.0758e-02 6.1630e-01 weaklyHypermeth 2.1094e-01 1.0000e+00 insignificant 6.9733e-02 4.2323e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03471321 6.0190e-01 lowCoverage 1.00000000 lowCoverage 0.522279 0.3970480 0.1264675 7 0.473451 0.3283481 0.1451028 1.3737e-03 9.9935e-01 weaklyHypermeth 1.3737e-02 1.0000e+00 weaklyHypermeth 2.3187e-02 9.9782e-01 weaklyHypermeth 2.4932e-01 1.0000e+00 insignificant 0.0770313 3.9634e-01 insignificant 1.0000e+00 insignificant 0.522279 0.4889590 0.00985000 6 0.473451 0.533108 -0.0596571 4.5309e-01 4.2779e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.0435e-01 6.0101e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0308869 0.68898196 lowCoverage 1.000000 lowCoverage 0.3970480 0.4889590 -0.11959123 6 0.3283481 0.5331080 -0.2047599 9.6116e-01 7.0591e-02 insignificant 1.0000e+00 5.1526e-01 insignificant 0.95633166 1.0532e-01 insignificant 1.00000 8.5627e-01 insignificant -0.10791821 2.2754e-01 lowCoverage 1.0000e+00 lowCoverage chr20 55489350 55490350 55204 RBM38 ENSG00000132819 0.703704 14 1 0.492424 24 2 0.646391 68 5 0.222222 10 1 0.333333 3 0 0.602281 152 5 0.5417143 84 5 0.6833333 29 2 0.434524 52 3 0.673148 95 4 0.7449090 139 5 0.6007576 26 2 0.5444888 114 6 0.673306 69 4 0.544974 124 4 0.4699013 47 3 0.000000 1 0 0.5573061 69 4 0.4715342 196 5 0.424439 218 6 0.6507937 56 4 0.5467873 52 4 0.498359 65 5 0.399306 54 5 0.341422 59 3 0.3625000 38 2 0.7100000 31 1 0.283333 11 1 0.787179 25 2 0.6438415 269 6 0.591609 212 6 0.783003 91 5 0.5237625 103 6 0.5038105 125 5 0.500000 2 0 0.158645 49 3 0.484778 126 6 0.7485514 176 6 0.5000000 9 1 0.8333333 4 0 0.4797619 55 4 0.490682 208 5 0.623420 69 4 0.4444444 0.2500000 0.300000 0.000000 0.00000000 0.466667 0.1666667 0.5000000 0.250000 0.444444 0.680000 0.5000000 0.7142857 0.875000 0.000000 0.0000000 0.000000 0.1666667 0.52941176 0.190476 0.777778 0.1000000 0.625000 0.500000 0.666667 0.1500000 0.7600000 0.200000 0.461538 0.3469388 0.450000 0.642857 0.30769231 0.1923077 NA 0.0000e+00 0.321429 0.8461538 0.0000000 0.5000000 0.375000 0.0666667 0.1666667 0 0.610821 0.616754 -0.03305235 4 0.431990 0.628498 -0.19650894 9.8930e-01 0.27287133 lowCoverage 1.0000e+00 1.000000 lowCoverage 9.7126e-01 0.40485412 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.0316099 0.6265017 lowCoverage 1 lowCoverage 0.611619 0.6075731 -6.1746e-02 4 0.575986 0.5592206 1.6765e-02 3.1423e-01 1.1902e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 1.1783e-01 3.1796e-01 lowCoverage 8.9954e-01 1.0000e+00 lowCoverage 0.03164325 7.2493e-01 lowCoverage 1.0000e+00 lowCoverage 0.610821 0.558140 0.05239724 4 0.431990 0.564994 -0.13300474 2.7180e-02 8.9274e-01 lowCoverage 5.0334e-01 1.0000e+00 lowCoverage 5.4003e-01 5.5667e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.06720494 4.1794e-01 lowCoverage 1.00000000 lowCoverage 0.616438 0.6075731 0.0098347 6 0.615776 0.5592206 0.0565552 1.3620e-01 1.1885e-01 insignificant 8.5122e-01 1.0000e+00 insignificant 2.1924e-01 6.8866e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0632532 5.0805e-01 lowCoverage 1.0000e+00 lowCoverage 0.612669 0.5565217 0.08360992 4 0.572554 0.502217 0.0703371 1.8349e-02 8.5744e-01 lowCoverage 3.3362e-01 1.0000e+00 lowCoverage 1.8243e-01 8.1783e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0355950 0.68151377 lowCoverage 1.000000 lowCoverage 0.6075731 0.5529412 0.12924981 4 0.5592206 0.4199924 0.1392282 1.7824e-02 8.0183e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.33227668 7.0118e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage -0.09884819 3.5887e-01 lowCoverage 1.0000e+00 lowCoverage chr20 55726850 55727850 55215 PMEPA1 ENSG00000124225 0.062717 478 12 0.021812 185 12 0.013313 273 12 0.120258 502 11 0.000000 91 8 0.065805 627 14 0.0908027 179 12 0.0450000 197 12 0.014297 277 12 0.012744 187 12 0.0323513 284 13 0.0355237 168 10 0.0101907 192 12 NA 0 0 0.000000 285 12 0.0105965 146 12 0.043309 203 11 0.0363964 466 10 0.0576923 200 12 0.068376 431 14 0.0616922 105 10 0.0400473 266 12 0.095072 315 12 0.000000 207 12 0.080420 167 8 0.0024691 303 13 0.0223941 269 13 0.028571 100 7 0.074242 174 12 0.0302764 381 12 0.000000 353 12 0.130163 639 13 0.0119048 172 10 0.0179487 153 12 0.125000 46 3 0.000000 155 10 0.039057 92 7 0.0051282 255 12 0.0728291 731 10 0.0803571 445 12 0.0990199 502 10 0.002470 570 11 0.072495 560 12 0.0302380 0.0328719 0.019152 0.036123 0.00034844 0.013633 0.0382107 0.0299725 0.017703 0.013751 0.027892 0.0406351 0.0107190 NA 0.000000 0.0069889 0.025776 0.0139461 0.01030220 0.010742 0.068217 0.0066863 0.037542 0.000000 0.021229 0.0026455 0.0135403 0.027473 0.027656 0.0109145 0.000000 0.041671 0.00535346 0.0298077 0.05378360 0.0000e+00 0.033739 0.0023246 0.0083226 0.0175137 0.030561 0.0058479 0.0024602 6 0.018991 0.019823 -0.00046877 12 0.049135 0.044839 0.00429639 3.3127e-01 0.15284550 insignificant 1.0000e+00 1.000000 insignificant 2.1142e-01 0.44294519 insignificant 1.0000e+00 1.00000 insignificant -0.0081026 0.5721669 insignificant 1 insignificant 0.018991 0.0137457 1.0021e-02 12 0.049135 0.0183893 3.0746e-02 1.9090e-01 9.8010e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.3116e-01 9.9603e-01 insignificant 9.5993e-01 1.0000e+00 insignificant 0.00583659 7.8531e-01 insignificant 1.0000e+00 insignificant 0.018991 0.005698 0.00719905 10 0.049135 0.060214 -0.01107847 1.1163e-01 8.5089e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.9096e-01 9.1938e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02642449 1.9588e-01 insignificant 1.00000000 insignificant 0.019823 0.0137457 0.0101481 12 0.044839 0.0183893 0.0264496 1.4481e-01 9.6898e-01 insignificant 8.9858e-01 1.0000e+00 insignificant 2.3934e-01 9.9083e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0139392 5.5294e-01 insignificant 1.0000e+00 insignificant 0.019823 0.0056980 0.00812524 10 0.044839 0.060214 -0.0153749 1.1647e-01 9.2201e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.2931e-01 9.5028e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0183218 0.39307378 insignificant 1.000000 insignificant 0.0137457 0.0056980 -0.00262080 10 0.0183893 0.0602137 -0.0418245 9.8136e-01 9.2598e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.99800093 9.2890e-01 insignificant 1.00000 1.0000e+00 insignificant -0.03226108 2.3385e-01 insignificant 1.0000e+00 insignificant chr20 55756350 55757350 55218 PMEPA1 ENSG00000124225 0.545503 86 5 0.465849 91 7 0.280952 72 7 0.683844 103 5 0.546753 71 6 0.688443 111 6 0.3650794 26 1 0.5331633 79 7 0.484848 74 6 0.523958 62 6 0.5651364 103 7 0.6250000 42 2 0.5994898 42 5 0.678571 65 6 0.589354 49 4 0.0000000 64 2 0.000000 2 0 0.5629630 105 5 0.5840909 149 7 0.637705 94 6 0.5185185 46 4 0.6632653 69 3 0.589286 64 5 0.621032 45 7 0.779767 139 5 0.5131009 121 7 0.4724556 117 7 0.430556 28 3 0.455990 88 6 0.5660088 85 7 0.478211 69 7 0.603968 76 7 0.0778786 87 7 0.1659452 60 7 0.142857 152 3 0.000000 55 3 0.092287 73 5 0.1054899 195 7 0.3439626 62 1 0.5528755 123 5 0.8038462 57 4 0.742015 72 4 0.332353 80 4 0.7853909 0.6362233 0.450000 0.790454 0.75942761 0.904765 0.4506173 0.7959656 0.769360 0.890123 0.801427 0.8733973 0.8495370 0.958333 0.852981 NA NA 0.6038409 0.82739899 0.843734 0.759259 0.5939153 0.803241 0.920304 0.848775 0.7400614 0.6807069 0.805657 0.826470 0.8997726 0.680322 0.841049 0.12294067 0.1580621 0.27777778 1.4840e-01 0.109428 0.1931718 0.3878181 0.7099925 0.821047 0.8241366 0.4148965 0 0.536242 0.615466 -0.01641364 7 0.434359 0.524381 -0.09002186 9.8156e-01 0.38277646 insignificant 1.0000e+00 1.000000 insignificant 9.0923e-01 0.75231705 insignificant 1.0000e+00 1.00000 insignificant -0.0596446 0.2684955 insignificant 1 insignificant 0.536242 0.1610306 3.8828e-01 7 0.434359 0.1352895 2.9907e-01 3.5974e-24 1.0000e+00 hypermethylated 1.4989e-22 1.0000e+00 hypermethylated 1.8312e-08 1.0000e+00 hypermethylated 7.6298e-07 1.0000e+00 hypermethylated 0.40062566 3.2189e-08 hypermethylated 2.6824e-06 hypermethylated 0.537424 0.730964 0.07044958 4 0.480449 0.566545 -0.08609635 1.5894e-01 5.4585e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 1.8368e-01 5.7389e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.05697517 6.1515e-01 lowCoverage 1.00000000 lowCoverage 0.613516 0.1607717 0.4664983 7 0.476710 0.1229904 0.3537194 1.4392e-24 1.0000e+00 hypermethylated 7.5748e-23 1.0000e+00 hypermethylated 3.0056e-07 1.0000e+00 hypermethylated 1.2998e-05 1.0000e+00 hypermethylated 0.4602703 2.1444e-09 hypermethylated 3.0634e-07 hypermethylated 0.617021 0.7309645 0.09339528 4 0.592976 0.566545 0.0264310 9.3662e-02 5.9261e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 1.7525e-01 8.4332e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0026695 0.98018025 lowCoverage 1.000000 lowCoverage 0.1618123 0.7309645 -0.46219057 4 0.1691118 0.5665450 -0.3974332 1.0000e+00 8.1233e-09 lowCoverage 1.0000e+00 3.1244e-07 lowCoverage 0.99999995 2.1700e-05 lowCoverage 1.00000 1.3562e-03 lowCoverage -0.45760083 8.0101e-03 lowCoverage 1.6688e-01 lowCoverage chr20 55778950 55779950 55220 PMEPA1 ENSG00000124225 0.606945 306 8 0.733887 209 7 0.619491 97 6 0.709646 222 8 0.657616 83 7 0.654182 197 8 0.6619471 105 6 0.7122485 118 8 0.660269 80 5 0.712169 82 4 0.6882019 205 8 0.5000000 28 2 0.7277101 85 7 0.600758 60 6 0.611504 87 6 0.3888889 43 3 0.753729 677 4 0.7234982 208 8 0.7835979 97 7 0.740437 172 7 0.6642767 62 7 0.8392857 37 3 0.688650 159 8 0.769345 52 6 0.634171 105 7 0.6634389 136 8 0.6308001 87 6 0.473760 43 6 0.660091 103 8 0.7415357 151 8 0.633539 164 7 0.704552 163 7 0.7032648 185 8 0.6741946 98 8 0.632401 213 8 0.717460 34 5 0.649110 75 8 0.8854579 181 7 0.6990079 252 8 0.6992464 244 9 0.6760148 224 6 0.639180 184 7 0.685756 219 9 0.7665857 0.6869130 0.735889 0.804076 0.70873195 0.773838 0.6543258 0.7636425 0.679749 0.731385 0.766214 0.4613936 0.7633141 0.709021 0.728862 0.4473939 0.823298 0.7859194 0.78913102 0.797993 0.845722 0.9291899 0.756406 0.765268 0.814348 0.7654400 0.6804901 0.663130 0.808496 0.7303348 0.709879 0.748212 0.75616700 0.6818323 0.75645120 7.5832e-01 0.759071 0.8286594 0.7352353 0.7145671 0.713828 0.6721236 0.7520327 3 0.732890 0.776984 -0.02264998 7 0.695800 0.718968 -0.02316760 9.0130e-01 0.06626361 insignificant 1.0000e+00 1.000000 insignificant 8.0799e-01 0.41203103 insignificant 1.0000e+00 1.00000 insignificant -0.0129510 0.6986304 insignificant 1 insignificant 0.732720 0.7671756 -9.0575e-03 8 0.665380 0.7288074 -6.3427e-02 8.7646e-01 2.3008e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.5614e-01 2.7482e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04797854 2.9268e-01 insignificant 1.0000e+00 insignificant 0.732783 0.698130 0.03730745 7 0.665237 0.671900 -0.00666276 4.0992e-03 8.0205e-02 weaklyHypermeth 9.3164e-02 1.0000e+00 weaklyHypermeth 8.9152e-02 2.4007e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01750486 4.6328e-01 insignificant 1.00000000 insignificant 0.776807 0.7671756 0.0049616 7 0.690865 0.7288074 -0.0379427 6.3813e-01 4.3064e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.9949e-01 3.1221e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0350276 4.5843e-01 insignificant 1.0000e+00 insignificant 0.777512 0.6981300 0.05475809 6 0.700961 0.671900 0.0290606 3.2913e-03 3.3874e-01 weaklyHypermeth 8.0275e-02 1.0000e+00 weaklyHypermeth 2.0045e-02 1.2158e-01 weaklyHypermeth 4.7727e-01 1.0000e+00 insignificant -0.0045539 0.87331851 insignificant 1.000000 insignificant 0.7665816 0.6981300 0.05618734 7 0.6986749 0.6719002 0.0267747 5.1223e-02 6.0273e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.14681353 7.3135e-01 insignificant 1.00000 1.0000e+00 insignificant 0.03047368 4.6468e-01 insignificant 1.0000e+00 insignificant chr20 56245050 56246050 55228 ANKRD60 ENSG00000124227 0.026595 546 11 0.018741 494 11 0.036300 534 11 0.032738 370 14 0.029262 354 11 0.048097 576 11 0.0378079 613 11 0.0266173 440 11 0.022904 561 11 0.035165 467 11 0.0058805 464 11 0.0259069 542 11 0.0130977 483 11 NA 0 0 0.024863 509 11 0.0179047 532 11 0.018868 583 11 0.0022727 262 11 0.0299479 263 11 0.015239 557 11 0.0097478 141 10 0.0047847 209 10 0.033864 420 10 0.042125 180 11 0.043290 159 9 0.0493263 695 11 0.0050505 232 10 0.060340 137 8 0.015152 287 11 0.0144014 617 13 0.013506 418 11 0.034687 684 15 0.0036364 449 11 0.0046832 331 11 0.000000 228 6 0.000000 117 8 0.019194 143 10 0.0047827 512 11 0.0025884 659 15 0.0083083 520 15 0.0479025 489 14 0.018942 453 10 0.033658 444 14 0.0200052 0.0165458 0.025584 0.011901 0.03869924 0.030331 0.0415669 0.0188696 0.019308 0.021265 0.012599 0.0256984 0.0094570 NA 0.020409 0.0242593 0.019928 0.0018229 0.01690120 0.014611 0.011926 0.0044643 0.031921 0.028184 0.036635 0.0040491 0.0042163 0.030519 0.010987 0.0139335 0.014655 0.028130 0.00095238 0.0060832 0.00054563 2.7056e-05 0.021245 0.0034172 0.0048025 0.0053603 0.009946 0.0101809 0.0280671 9 0.021639 0.016280 0.00538096 11 0.032491 0.027890 0.00460173 3.6639e-02 0.98866777 weaklyHypermeth 1.0000e+00 1.000000 insignificant 1.7059e-02 0.99106025 weaklyHypermeth 1.0000e+00 1.00000 insignificant -0.0025469 0.6798452 insignificant 1 insignificant 0.021639 0.0061867 1.8190e-02 11 0.032491 0.0048530 2.7638e-02 4.2789e-04 1.0000e+00 weaklyHypermeth 4.4572e-03 1.0000e+00 weaklyHypermeth 5.0631e-04 1.0000e+00 weaklyHypermeth 8.5815e-03 1.0000e+00 weaklyHypermeth 0.01925983 2.2546e-04 weaklyHypermeth 8.0523e-03 weaklyHypermeth 0.021639 0.010530 0.00875876 11 0.032491 0.019601 0.01288986 7.2741e-03 9.9192e-01 weaklyHypermeth 1.5154e-01 1.0000e+00 insignificant 5.0227e-02 9.9811e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00236268 7.9723e-01 insignificant 1.00000000 insignificant 0.016276 0.0061798 0.0110419 11 0.026147 0.0045496 0.0215969 8.6672e-02 9.8678e-01 insignificant 5.6649e-01 1.0000e+00 insignificant 1.8793e-01 9.9766e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0218067 3.0145e-03 weaklyHypermeth 7.0105e-02 weaklyHypermeth 0.016276 0.0105263 0.00351113 11 0.026147 0.018376 0.0077701 4.7421e-01 8.7289e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.9129e-01 7.1079e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0049095 0.63551784 insignificant 1.000000 insignificant 0.0061798 0.0105263 -0.00944676 11 0.0045496 0.0183764 -0.0138268 9.9951e-01 5.0642e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.99999407 6.2612e-01 insignificant 1.00000 1.0000e+00 insignificant -0.01689715 1.1315e-01 insignificant 1.0000e+00 insignificant chr20 56602650 56603650 55252 APCDD1L ENSG00000198768 0.966667 80 3 0.891517 288 6 0.720696 74 6 0.950617 48 3 0.856349 67 6 0.894732 252 6 0.7240028 96 6 0.7826421 108 6 0.881746 67 6 0.971429 46 6 0.8200482 270 6 0.7129630 17 1 0.6869658 29 1 0.909091 28 1 0.876984 36 3 0.8452381 20 2 1.000000 30 1 0.6076923 36 3 0.9509804 68 3 0.870145 186 3 0.7702878 93 6 0.1285714 17 1 0.738725 86 6 0.737687 70 6 0.748101 98 4 0.8846236 218 6 0.8348639 90 3 0.766667 33 3 0.883013 48 3 0.9035937 245 6 0.892352 252 6 0.887284 242 3 0.7750110 110 6 0.6309524 70 3 0.825000 21 1 0.272727 11 1 0.863545 133 6 0.6519384 218 6 0.4586814 159 6 0.4529617 137 6 0.8095238 45 3 0.279412 20 1 0.561530 100 6 0.8371429 0.7009102 0.547645 0.758730 0.79936508 0.890166 0.7586081 0.8553983 0.890272 0.837143 0.863745 0.8190476 0.5146520 0.777922 0.756122 0.5500000 0.972364 0.4730769 0.92226891 0.793862 0.692896 0.2628571 0.826027 0.844000 0.636508 0.8800370 0.6957434 0.631429 0.924863 0.8909357 0.843356 0.855355 0.58453416 0.5214286 0.70381042 3.5892e-01 0.738180 0.1701800 0.1357143 0.2116007 0.375510 0.1872788 0.4182584 1 0.820152 0.830872 -0.01170738 6 0.880874 0.710092 0.17078236 5.5703e-01 0.83670040 insignificant 1.0000e+00 1.000000 insignificant 6.0113e-02 0.99840419 insignificant 1.0000e+00 1.00000 insignificant 0.0813779 0.2342444 lowCoverage 1 lowCoverage 0.819957 0.5825933 2.5733e-01 6 0.841166 0.7327511 1.0841e-01 1.7771e-05 6.9380e-01 hypermethylated 2.0194e-04 1.0000e+00 hypermethylated 9.4485e-03 9.8575e-01 weaklyHypermeth 1.1300e-01 1.0000e+00 insignificant 0.17616292 1.0361e-01 lowCoverage 1.0000e+00 lowCoverage 0.819957 0.338395 0.47253732 6 0.841166 0.507781 0.33338539 4.9210e-19 1.0000e+00 hypermethylated 1.6403e-16 1.0000e+00 hypermethylated 5.9289e-06 1.0000e+00 hypermethylated 7.4111e-04 1.0000e+00 hypermethylated 0.33360359 1.6118e-02 lowCoverage 0.41300287 lowCoverage 0.831763 0.5825933 0.2485556 6 0.835678 0.7327511 0.1029272 8.7977e-04 6.8303e-01 hypermethylated 8.9772e-03 1.0000e+00 hypermethylated 1.9966e-01 6.8836e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0947850 3.9678e-01 lowCoverage 1.0000e+00 lowCoverage 0.831763 0.3383948 0.48905433 6 0.835678 0.507781 0.3278978 3.3017e-15 1.0000e+00 hypermethylated 1.6508e-12 1.0000e+00 hypermethylated 1.1906e-04 9.9953e-01 hypermethylated 1.1906e-02 1.0000e+00 hypermethylated 0.2522257 0.04429949 lowCoverage 0.791062 lowCoverage 0.5825933 0.3383948 0.20929377 6 0.7327511 0.5077806 0.2249706 6.5914e-04 9.9998e-01 hypermethylated 1.1914e-01 1.0000e+00 insignificant 0.03648744 9.9879e-01 weaklyHypermeth 1.00000 1.0000e+00 insignificant 0.15744067 2.3542e-01 lowCoverage 1.0000e+00 lowCoverage chr20 56604950 56605950 55253 APCDD1L ENSG00000198768 0.819305 250 7 0.807013 243 9 0.739540 186 7 0.737618 221 7 0.932586 156 8 0.905434 354 7 0.9227283 220 9 0.8958070 206 8 0.892438 121 7 0.922034 88 7 0.8925581 438 10 0.8271944 98 7 0.7450784 114 7 0.900000 63 5 0.854398 135 7 0.8246848 87 7 0.800000 24 3 0.5971527 226 6 0.9295405 222 7 0.896613 235 6 0.7174283 104 7 0.5056277 40 3 0.864630 158 8 0.855133 128 6 0.854167 42 5 0.8783521 279 9 0.7410441 162 8 0.692929 63 6 0.649694 146 6 0.8634308 279 9 0.899682 252 7 0.926896 248 7 0.2834650 291 8 0.1022124 136 7 0.289021 245 8 0.600000 17 2 0.273638 264 9 0.3727226 308 8 0.3737787 274 7 0.3610552 191 7 0.5112001 158 6 0.226894 108 5 0.479639 224 8 0.8609251 0.7685459 0.716060 0.740018 0.92074001 0.866142 0.8988580 0.8962353 0.879860 0.891321 0.879933 0.9185342 0.8506151 0.876195 0.854754 0.7548685 0.840745 0.5778103 0.93646612 0.880824 0.869418 0.5792999 0.910728 0.805490 0.815114 0.8672231 0.7841143 0.839318 0.669334 0.8489136 0.840939 0.914588 0.12135765 0.1751925 0.22905844 4.6590e-01 0.165543 0.2552125 0.3737576 0.3607305 0.469085 0.3328512 0.4251197 5 0.836995 0.823405 0.00904770 7 0.819218 0.771915 0.04730327 4.5615e-01 0.87593817 insignificant 1.0000e+00 1.000000 insignificant 3.1864e-01 0.96321631 insignificant 1.0000e+00 1.00000 insignificant 0.0546683 0.2025373 insignificant 1 insignificant 0.837134 0.1682540 6.7168e-01 8 0.864984 0.3015506 5.6343e-01 1.9141e-55 9.9999e-01 hypermethylated 2.3926e-53 1.0000e+00 hypermethylated 3.2876e-13 1.0000e+00 hypermethylated 4.1095e-11 1.0000e+00 hypermethylated 0.52190965 3.1675e-04 hypermethylated 1.0922e-02 hypermethylated 0.836601 0.407757 0.45893925 7 0.792843 0.371299 0.42154390 1.1360e-35 1.0000e+00 hypermethylated 1.1360e-32 1.0000e+00 hypermethylated 1.0558e-11 1.0000e+00 hypermethylated 3.5193e-09 1.0000e+00 hypermethylated 0.45157276 3.0949e-04 hypermethylated 0.03218284 hypermethylated 0.824432 0.1689136 0.6614865 7 0.775900 0.3650460 0.4108538 1.6727e-41 1.0000e+00 hypermethylated 2.3896e-39 1.0000e+00 hypermethylated 2.2030e-09 1.0000e+00 hypermethylated 1.2239e-07 1.0000e+00 hypermethylated 0.4672413 2.5738e-04 hypermethylated 9.1921e-03 hypermethylated 0.823716 0.4073298 0.47091728 7 0.794575 0.340357 0.4542176 1.3958e-27 1.0000e+00 hypermethylated 1.3958e-24 1.0000e+00 hypermethylated 8.8444e-09 1.0000e+00 hypermethylated 4.4222e-06 1.0000e+00 hypermethylated 0.3969044 0.00016388 hypermethylated 0.046564 hypermethylated 0.1675933 0.4086134 -0.22982355 7 0.2239451 0.4538095 -0.2298644 9.9938e-01 5.8674e-08 hypomethylated 1.0000e+00 1.9558e-06 hypomethylated 0.99962525 4.9922e-04 hypomethylated 1.00000 1.5128e-02 hypomethylated -0.07033689 4.2148e-01 insignificant 1.0000e+00 insignificant chr20 56631850 56632850 55255 ENSG00000221174 0.814182 90 5 0.769610 173 5 0.714437 173 5 0.885024 75 5 0.922603 138 5 0.968778 106 5 0.7587168 112 5 0.8804902 156 5 0.840942 109 5 0.932895 86 5 0.8393693 201 5 0.8484848 40 5 0.6728205 54 5 0.955556 64 5 0.852962 143 5 0.6972727 57 3 NA 0 0 0.7584259 72 5 0.5876627 145 5 0.816696 71 5 0.6975082 77 5 0.6459524 50 5 0.895540 90 5 0.694810 56 5 0.886970 52 2 0.7969580 228 5 0.6226448 178 5 0.749072 45 4 0.791403 105 5 0.7258194 206 5 0.765161 154 5 0.942965 162 5 0.1954062 109 5 0.1702381 66 5 0.190476 21 3 0.000000 2 0 0.177195 169 5 0.0075472 185 5 0.7987128 102 5 0.7111111 54 5 0.8333333 60 5 0.791667 27 2 0.926984 68 5 0.9775155 0.7797245 0.707082 0.904928 0.90565907 0.972902 0.7844826 0.8627227 0.798558 0.918177 0.857718 0.8895238 0.6513407 0.950476 0.869449 0.7427792 NA 0.7296876 0.58142120 0.857636 0.777549 0.7414286 0.898973 0.891395 0.886857 0.8032858 0.8230538 0.724422 0.812838 0.7168463 0.775234 0.945021 0.20610644 0.1957483 0.18196979 4.1265e-02 0.291033 0.0118598 0.8451520 0.7701587 0.897143 0.9207143 0.8611701 2 0.825666 0.808981 0.01539374 5 0.706128 0.689660 0.01646773 2.4354e-01 0.85756993 insignificant 1.0000e+00 1.000000 insignificant 6.3848e-01 0.97961759 insignificant 1.0000e+00 1.00000 insignificant 0.0487802 0.2023973 lowCoverage 1 lowCoverage 0.825897 0.1485507 6.7749e-01 5 0.691504 0.1124794 5.7902e-01 1.5394e-40 1.0000e+00 hypermethylated 1.1842e-38 1.0000e+00 hypermethylated 1.1859e-11 1.0000e+00 hypermethylated 8.4706e-10 1.0000e+00 hypermethylated 0.69320337 7.2767e-08 lowCoverage 5.1976e-06 lowCoverage 0.825581 0.855305 -0.03478556 5 0.664146 0.738284 -0.07413820 7.6617e-01 5.5947e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7189e-01 7.4334e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00431887 9.2068e-01 lowCoverage 1.00000000 lowCoverage 0.810172 0.1485507 0.6611051 5 0.725102 0.1124794 0.6126230 9.5609e-31 1.0000e+00 hypermethylated 6.3739e-29 1.0000e+00 hypermethylated 1.2459e-10 1.0000e+00 hypermethylated 1.3448e-08 1.0000e+00 hypermethylated 0.6444232 4.1557e-08 lowCoverage 3.7779e-06 lowCoverage 0.809864 0.8553055 -0.04092205 5 0.716754 0.738284 -0.0215299 9.1612e-01 3.2865e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8146e-01 4.4926e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0444613 0.35131230 lowCoverage 1.000000 lowCoverage 0.1485507 0.8548387 -0.69223924 5 0.1124794 0.6946651 -0.5821857 1.0000e+00 7.6327e-17 hypomethylated 1.0000e+00 5.8713e-15 hypomethylated 1.00000000 8.4340e-07 hypomethylated 1.00000 7.0283e-05 hypomethylated -0.68888450 3.1468e-07 lowCoverage 7.8670e-05 lowCoverage chr20 56632150 56633150 55256 ENSG00000221174 0.814182 90 5 0.769610 173 5 0.714437 173 5 0.885024 75 5 0.922603 138 5 0.968778 106 5 0.7587168 112 5 0.8804902 156 5 0.840942 109 5 0.932895 86 5 0.8393693 201 5 0.8484848 40 5 0.6728205 54 5 0.955556 64 5 0.852962 143 5 0.6972727 57 3 NA 0 0 0.7584259 72 5 0.5876627 145 5 0.816696 71 5 0.6975082 77 5 0.6459524 50 5 0.895540 90 5 0.694810 56 5 0.886970 52 2 0.7969580 228 5 0.6226448 178 5 0.749072 45 4 0.791403 105 5 0.7258194 206 5 0.765161 154 5 0.942965 162 5 0.1954062 109 5 0.1702381 66 5 0.190476 21 3 0.000000 2 0 0.177195 169 5 0.0075472 185 5 0.7987128 102 5 0.7111111 54 5 0.8333333 60 5 0.791667 27 2 0.926984 68 5 0.9775155 0.7797245 0.707082 0.904928 0.90565907 0.972902 0.7844826 0.8627227 0.798558 0.918177 0.857718 0.8895238 0.6513407 0.950476 0.869449 0.7427792 NA 0.7296876 0.58142120 0.857636 0.777549 0.7414286 0.898973 0.891395 0.886857 0.8032858 0.8230538 0.724422 0.812838 0.7168463 0.775234 0.945021 0.20610644 0.1957483 0.18196979 4.1265e-02 0.291033 0.0118598 0.8451520 0.7701587 0.897143 0.9207143 0.8611701 2 0.825666 0.808981 0.01539374 5 0.706128 0.689660 0.01646773 2.4354e-01 0.85756993 insignificant 1.0000e+00 1.000000 insignificant 6.3848e-01 0.97961759 insignificant 1.0000e+00 1.00000 insignificant 0.0487802 0.2023973 lowCoverage 1 lowCoverage 0.825897 0.1485507 6.7749e-01 5 0.691504 0.1124794 5.7902e-01 1.5394e-40 1.0000e+00 hypermethylated 1.1842e-38 1.0000e+00 hypermethylated 1.1859e-11 1.0000e+00 hypermethylated 8.4706e-10 1.0000e+00 hypermethylated 0.69320337 7.2767e-08 lowCoverage 5.1976e-06 lowCoverage 0.825581 0.855305 -0.03478556 5 0.664146 0.738284 -0.07413820 7.6617e-01 5.5947e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7189e-01 7.4334e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00431887 9.2068e-01 lowCoverage 1.00000000 lowCoverage 0.810172 0.1485507 0.6611051 5 0.725102 0.1124794 0.6126230 9.5609e-31 1.0000e+00 hypermethylated 6.3739e-29 1.0000e+00 hypermethylated 1.2459e-10 1.0000e+00 hypermethylated 1.3448e-08 1.0000e+00 hypermethylated 0.6444232 4.1557e-08 lowCoverage 3.7779e-06 lowCoverage 0.809864 0.8553055 -0.04092205 5 0.716754 0.738284 -0.0215299 9.1612e-01 3.2865e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8146e-01 4.4926e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0444613 0.35131230 lowCoverage 1.000000 lowCoverage 0.1485507 0.8548387 -0.69223924 5 0.1124794 0.6946651 -0.5821857 1.0000e+00 7.6327e-17 hypomethylated 1.0000e+00 5.8713e-15 hypomethylated 1.00000000 8.4340e-07 hypomethylated 1.00000 7.0283e-05 hypomethylated -0.68888450 3.1468e-07 lowCoverage 7.8670e-05 lowCoverage chr20 56648350 56649350 55260 ENSG00000221174 0.923656 203 7 0.914894 47 1 0.951613 34 1 0.901182 234 7 0.875000 21 1 0.867187 168 7 0.5833333 14 1 0.8947368 19 1 0.830189 53 1 0.900000 30 1 0.9512195 41 1 0.8461538 13 1 0.8974359 39 1 1.000000 8 1 0.960000 25 1 0.0000000 1 0 0.800000 5 1 0.5817149 166 6 0.9500000 36 3 0.707418 106 3 0.8888889 9 1 1.0000000 10 1 0.827957 36 1 0.863636 22 1 NA 0 0 0.9076037 86 3 0.9166667 24 1 0.976190 22 1 0.940000 51 1 0.9509419 94 4 0.846154 68 7 0.834282 165 7 1.0000000 74 1 0.6315789 19 1 1.000000 39 2 0.588580 148 6 0.964286 28 1 0.5493070 149 7 0.9464485 270 7 0.8684716 134 7 0.9281661 183 7 0.981059 141 3 0.887403 170 8 0.9375000 0.9148936 0.903226 0.914894 0.75000000 0.897436 0.6666667 0.8947368 0.830189 0.900000 0.951220 0.8461538 0.8974359 1.000000 0.960000 0.0000000 0.800000 0.9193548 1.00000000 0.946429 0.888889 1.0000000 0.967742 0.863636 NA 0.9032258 0.9166667 0.952381 0.880000 0.9423077 1.000000 0.977011 1.00000000 0.6315789 NA NA 0.964286 0.9701493 0.9137931 0.8709677 0.930556 0.9531250 0.9454545 1 0.874504 0.911414 -0.03202242 3 0.877213 0.882687 -0.00547369 8.6945e-01 0.04888004 lowCoverage 1.0000e+00 1.000000 lowCoverage 9.9919e-01 0.01721094 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.0879698 0.1106227 lowCoverage 1 lowCoverage 0.874404 0.7921225 2.2570e-02 3 0.859672 0.6873719 1.7230e-01 5.0909e-03 2.0822e-01 lowCoverage 4.2424e-02 1.0000e+00 lowCoverage 8.4624e-01 2.6624e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.02782802 7.9326e-01 lowCoverage 1.0000e+00 lowCoverage 0.874901 0.915273 -0.04329310 3 0.890856 0.921853 -0.03099738 9.7281e-01 4.4649e-02 lowCoverage 1.0000e+00 9.3019e-01 lowCoverage 9.9875e-01 2.7533e-02 lowCoverage 1.0000e+00 8.7109e-01 lowCoverage -0.10552282 6.2971e-02 lowCoverage 0.77742272 lowCoverage 0.911263 0.7921225 0.0419975 3 0.865928 0.6873719 0.1785557 6.4134e-03 8.2780e-01 lowCoverage 5.7779e-02 1.0000e+00 lowCoverage 4.3476e-01 8.9735e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.1157978 2.5788e-01 lowCoverage 1.0000e+00 lowCoverage 0.911414 0.9158249 -0.00733177 3 0.882687 0.932918 -0.0502317 8.9770e-01 1.7799e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.4977e-01 8.2167e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0175530 0.52711560 lowCoverage 1.000000 lowCoverage 0.7921225 0.9157303 -0.12854153 7 0.6873719 0.9233353 -0.2359634 7.4820e-01 2.4906e-05 weaklyHypometh 1.0000e+00 4.8836e-04 weaklyHypometh 0.63606428 2.9692e-01 insignificant 1.00000 1.0000e+00 insignificant -0.13335084 2.0211e-01 lowCoverage 1.0000e+00 lowCoverage chr20 56890150 56891150 55264 GNAS ENSG00000087460 0.709065 423 13 0.656564 177 11 0.601574 151 12 0.726296 267 13 0.590278 62 6 0.539100 348 12 0.5894841 106 12 0.6569837 129 10 0.554743 125 10 0.699674 132 12 0.6370109 248 12 0.5924603 81 8 0.6594474 180 10 0.655556 34 6 0.662393 110 10 0.6222222 48 7 0.348596 78 7 0.6803530 229 13 0.5582804 206 8 0.692182 297 12 0.5516667 37 3 0.7138889 58 7 0.659300 219 13 0.559042 91 8 0.705556 57 8 0.6499305 342 12 0.7159609 80 6 0.679762 52 5 0.650336 164 7 0.6905973 258 12 0.641138 203 10 0.681062 366 13 0.6093585 138 10 0.6659517 145 12 0.527449 221 12 0.714103 90 5 0.612143 100 8 0.6029517 263 12 0.7281363 362 13 0.7464868 264 13 0.7545722 386 13 0.715213 271 13 0.785730 375 13 0.6845786 0.6379032 0.553277 0.702435 0.59845133 0.629618 0.6040982 0.6514220 0.594330 0.706670 0.640635 0.6369961 0.6913894 0.668291 0.728835 0.5510024 0.427521 0.6703272 0.63181180 0.669978 0.622448 0.6827434 0.712693 0.587223 0.700000 0.6477706 0.7138324 0.662986 0.658287 0.6795313 0.626314 0.663044 0.57498420 0.6528780 0.54281618 7.1202e-01 0.683208 0.5616125 0.7029615 0.7112305 0.715931 0.6839019 0.7084107 2 0.675313 0.673947 -0.00680219 12 0.652310 0.673128 -0.02081802 7.9007e-01 0.30047706 insignificant 1.0000e+00 1.000000 insignificant 9.9670e-01 0.04596128 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.0365735 0.1444286 insignificant 1 insignificant 0.675313 0.5841170 6.7115e-02 11 0.652310 0.6225113 2.9799e-02 1.4850e-05 9.8788e-01 weaklyHypermeth 1.7070e-04 1.0000e+00 weaklyHypermeth 3.3204e-01 7.2480e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00037965 9.9071e-01 insignificant 1.0000e+00 insignificant 0.675313 0.765700 -0.05818271 12 0.652310 0.755890 -0.10357908 7.4220e-01 8.6067e-06 weaklyHypometh 1.0000e+00 1.7213e-03 weaklyHypometh 9.9811e-01 1.7586e-06 weaklyHypometh 1.0000e+00 5.8620e-04 weaklyHypometh -0.12441447 1.5570e-05 weaklyHypometh 0.00311402 weaklyHypometh 0.673947 0.5841170 0.0730348 11 0.673128 0.6225113 0.0506172 8.1568e-06 9.3222e-01 weaklyHypermeth 1.0672e-04 1.0000e+00 weaklyHypermeth 4.2486e-02 9.4477e-01 weaklyHypermeth 3.8978e-01 1.0000e+00 insignificant 0.0361938 2.6164e-01 insignificant 1.0000e+00 insignificant 0.673416 0.7659831 -0.05117756 12 0.651487 0.786403 -0.1349159 9.7239e-01 1.5137e-03 weaklyHypometh 1.0000e+00 1.3761e-01 insignificant 9.9778e-01 6.1796e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0878410 0.00054067 weaklyHypometh 0.077239 weaklyHypometh 0.5841170 0.7657005 -0.12502623 11 0.6225113 0.7558895 -0.1333782 9.9998e-01 3.4894e-08 weaklyHypometh 1.0000e+00 1.2924e-06 weaklyHypometh 0.99998637 2.1659e-03 weaklyHypometh 1.00000 4.0792e-02 weaklyHypometh -0.12403483 3.3283e-03 weaklyHypometh 1.0401e-01 insignificant chr20 56991650 56992650 55267 TH1L ENSG00000101158 0.844744 230 10 0.446795 193 7 0.406370 109 8 0.700858 209 10 0.659668 83 6 0.736490 333 11 0.5755424 86 10 0.5867282 147 9 0.530082 105 8 0.641672 92 7 0.7418914 248 10 0.5121032 54 5 0.7320845 120 10 0.602479 53 6 0.468182 70 6 0.6000000 41 3 0.515873 18 1 0.8391522 198 10 0.7511017 130 7 0.737324 339 11 0.6736264 67 8 0.7680556 109 10 0.625299 157 10 0.431502 103 8 0.832341 70 7 0.8012758 197 8 0.5963462 90 5 0.414886 60 4 0.719762 163 8 0.7342208 258 9 0.746260 208 9 0.721946 417 10 0.5280130 168 7 0.6675214 79 7 0.634827 154 6 0.537879 26 0 0.542979 110 8 0.6533283 196 8 0.6092923 187 10 0.6650910 174 10 0.6126442 172 9 0.602767 156 11 0.690354 214 10 0.7602229 0.6526231 0.646020 0.748628 0.72524609 0.752016 0.5644700 0.7522031 0.570860 0.666175 0.746794 0.5163027 0.7421027 0.722351 0.636943 0.7223621 0.612375 0.8164805 0.69551379 0.755681 0.783439 0.8009996 0.696607 0.704277 0.718305 0.7527225 0.6087049 0.594072 0.687731 0.7255895 0.679753 0.726882 0.65543355 0.6924982 0.65138282 3.8330e-01 0.676196 0.6687333 0.7432777 0.8090140 0.768505 0.7099769 0.8041835 2 0.713436 0.735650 0.00165887 8 0.653767 0.678043 -0.02427552 6.5112e-01 0.36254871 insignificant 1.0000e+00 1.000000 insignificant 6.9820e-01 0.48087391 insignificant 1.0000e+00 1.00000 insignificant -0.0406697 0.4065926 insignificant 1 insignificant 0.713135 0.6903138 4.0579e-02 8 0.629036 0.6108738 1.8163e-02 4.8788e-02 5.9737e-01 weaklyHypermeth 3.3416e-01 1.0000e+00 insignificant 9.3275e-02 5.2860e-01 insignificant 7.7087e-01 1.0000e+00 insignificant 0.03736576 3.4857e-01 insignificant 1.0000e+00 insignificant 0.713135 0.771872 -0.04325119 8 0.629036 0.634047 -0.00501090 8.1507e-01 6.1432e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 6.2130e-01 1.4314e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00457273 8.9271e-01 insignificant 1.00000000 insignificant 0.735480 0.6903138 0.0392855 8 0.669332 0.6108738 0.0584579 1.9038e-02 6.8513e-01 weaklyHypermeth 1.5110e-01 1.0000e+00 insignificant 7.7165e-02 8.9758e-01 insignificant 6.4279e-01 1.0000e+00 insignificant 0.0780355 1.1467e-01 insignificant 1.0000e+00 insignificant 0.735480 0.7718715 -0.04728395 9 0.669332 0.634047 0.0352843 7.2987e-01 3.4727e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 6.3711e-01 2.3136e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0360970 0.40958499 insignificant 1.000000 insignificant 0.6903138 0.7718715 -0.08955720 8 0.6108738 0.6340473 -0.0231736 9.0537e-01 8.6605e-03 weaklyHypometh 1.0000e+00 8.4082e-02 weaklyHypometh 0.90225674 2.8399e-02 weaklyHypometh 1.00000 3.2943e-01 insignificant -0.04193849 2.1941e-01 insignificant 1.0000e+00 insignificant chr20 57071750 57072750 55274 SLMO2 ENSG00000101166 0.750944 578 8 0.623164 760 11 0.619415 305 11 0.709319 296 8 0.728896 178 10 0.772075 740 10 0.6440517 325 11 0.6919887 411 11 0.623586 225 8 0.881351 208 8 0.7697914 494 11 0.7878788 73 5 0.5148437 309 8 0.689729 162 7 0.638860 367 8 0.4238095 52 7 0.674107 31 4 0.6066183 427 8 0.5903538 569 8 0.724207 630 8 0.9478535 116 10 0.7053571 50 4 0.740848 384 11 0.749234 213 8 0.575000 35 4 0.7034566 681 11 0.5410670 325 8 0.484264 94 7 0.577819 713 8 0.5802269 632 11 0.563596 746 8 0.739421 815 11 0.5824778 455 8 0.6044969 337 8 0.815698 710 11 0.348052 88 8 0.661320 263 11 0.5814864 568 11 0.5810115 762 11 0.5420975 511 11 0.6760050 363 8 0.439297 460 8 0.543357 376 11 0.7147927 0.5857391 0.580071 0.755083 0.69139466 0.729035 0.6165333 0.6520402 0.627828 0.805589 0.765716 0.7380631 0.4127156 0.789071 0.574890 0.3798650 0.580153 0.4758093 0.51607760 0.657978 0.961919 0.5741622 0.778899 0.601512 0.470030 0.6324323 0.6071007 0.555805 0.616663 0.5018304 0.471714 0.768614 0.46419542 0.4418154 0.81543974 2.4205e-01 0.561380 0.3669235 0.4832642 0.5338346 0.623506 0.3957516 0.5858950 8 0.605296 0.565362 0.02861053 8 0.622710 0.656323 -0.03361309 2.7719e-01 0.72991390 insignificant 1.0000e+00 1.000000 insignificant 5.1312e-01 0.83295698 insignificant 1.0000e+00 1.00000 insignificant 0.0142375 0.7475388 insignificant 1 insignificant 0.605466 0.5220983 8.8877e-02 9 0.679320 0.6456377 3.3682e-02 5.7354e-02 7.8483e-01 insignificant 3.8236e-01 1.0000e+00 insignificant 4.5712e-03 6.6059e-01 weaklyHypermeth 5.7864e-02 1.0000e+00 weaklyHypermeth 0.07432766 2.9929e-01 insignificant 1.0000e+00 insignificant 0.605466 0.524099 0.13037479 8 0.679320 0.559101 0.12021837 5.7376e-06 9.9996e-01 weaklyHypermeth 2.4946e-04 1.0000e+00 weaklyHypermeth 8.8996e-05 9.9997e-01 weaklyHypermeth 6.3569e-03 1.0000e+00 weaklyHypermeth 0.11689584 3.2938e-02 weaklyHypermeth 0.56938567 insignificant 0.565299 0.5220983 0.0621918 8 0.655382 0.6456377 0.0097448 3.7935e-01 5.1017e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.6525e-01 6.9132e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0600901 4.2661e-01 insignificant 1.0000e+00 insignificant 0.565299 0.5240988 0.10413189 8 0.655382 0.559101 0.0962811 2.9172e-03 9.9997e-01 weaklyHypermeth 7.4801e-02 1.0000e+00 weaklyHypermeth 2.5768e-02 9.9979e-01 weaklyHypermeth 5.6018e-01 1.0000e+00 insignificant 0.1026583 0.07878062 insignificant 1.000000 insignificant 0.5220983 0.5240988 0.04002498 8 0.6456377 0.5591013 0.0865364 3.1040e-02 9.5685e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.20488798 7.5681e-01 insignificant 1.00000 1.0000e+00 insignificant 0.04256818 5.7345e-01 insignificant 1.0000e+00 insignificant chr20 59509350 59510350 55285 CDH4 ENSG00000179242 0.953247 411 6 0.931843 424 6 0.726552 155 6 0.911513 263 6 0.685758 67 6 0.881603 410 6 0.8931509 133 7 0.8990335 198 6 0.786715 182 7 0.788263 133 6 0.9213768 263 6 0.8488095 61 5 0.8499699 201 7 0.787500 35 2 0.829539 166 6 0.8110048 51 5 0.620726 45 4 0.9720256 222 6 0.9253303 233 6 0.951182 333 6 0.8783272 92 6 0.9635043 93 4 0.715152 228 6 0.992424 96 6 0.951132 56 5 0.8389671 405 6 0.8550570 75 6 0.676266 49 4 0.900791 224 6 0.7719393 494 6 0.958425 488 6 0.948178 400 6 0.8091326 252 6 0.7175657 171 6 0.625000 16 2 0.866667 34 4 0.898589 146 6 0.8709870 477 6 0.9697415 446 6 0.9827756 374 6 0.9371027 259 6 0.973237 267 6 0.952697 342 6 0.9462869 0.9398434 0.828479 0.914723 0.76673586 0.936824 0.9181352 0.9547548 0.865126 0.884492 0.922266 0.7646032 0.9369783 0.927583 0.907364 0.7177033 0.646634 0.9684671 0.90826866 0.953430 0.864946 0.9552931 0.950918 0.992525 0.921494 0.9796112 0.8616315 0.902440 0.869065 0.9807390 0.949238 0.941818 0.84467222 0.8526723 0.66782382 8.7114e-01 0.919252 0.8766205 0.9708062 0.9793511 0.937266 0.9619752 0.9514797 4 0.903161 0.949944 -0.03093246 6 0.826901 0.855855 -0.02895396 9.9721e-01 0.01848636 weaklyHypometh 1.0000e+00 1.000000 insignificant 9.2487e-01 0.05798401 insignificant 1.0000e+00 1.00000 insignificant -0.0220898 0.5524544 insignificant 1 insignificant 0.903161 0.8631387 5.3320e-02 6 0.826901 0.7865925 4.0308e-02 2.7528e-06 9.4489e-01 weaklyHypermeth 3.3166e-05 1.0000e+00 weaklyHypermeth 1.3309e-02 9.7102e-01 weaklyHypermeth 1.5297e-01 1.0000e+00 insignificant 0.05076700 3.2627e-01 insignificant 1.0000e+00 insignificant 0.920659 0.964455 -0.04342876 6 0.923051 0.963338 -0.04028677 9.9591e-01 1.6725e-02 weaklyHypometh 1.0000e+00 5.2265e-01 insignificant 9.7348e-01 1.6352e-03 weaklyHypometh 1.0000e+00 1.0901e-01 insignificant -0.11435368 4.4185e-05 weaklyHypometh 0.00736423 weaklyHypometh 0.949944 0.8631387 0.0847166 6 0.855855 0.7865925 0.0692624 1.2381e-07 9.9984e-01 weaklyHypermeth 2.2927e-06 1.0000e+00 weaklyHypermeth 6.3878e-03 9.9887e-01 weaklyHypermeth 8.4050e-02 1.0000e+00 weaklyHypermeth 0.0728568 1.9762e-01 insignificant 1.0000e+00 insignificant 0.951673 0.9644550 -0.01191581 6 0.950878 0.963338 -0.0124595 9.1400e-01 2.7218e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.9921e-01 5.2834e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0922639 0.01097693 weaklyHypometh 0.458068 insignificant 0.8660550 0.9644550 -0.09798483 6 0.8621357 0.9633378 -0.1012022 1.0000e+00 4.3176e-06 weaklyHypometh 1.0000e+00 1.0280e-04 weaklyHypometh 0.99999641 1.0235e-03 weaklyHypometh 1.00000 2.2250e-02 weaklyHypometh -0.16512068 1.1958e-02 weaklyHypometh 2.1354e-01 insignificant chr20 60040150 60041150 55289 MIR1257 ENSG00000221417 1.000000 34 4 0.863849 174 5 0.912666 232 5 1.000000 7 0 0.944108 271 5 0.870000 22 3 0.9238306 282 5 0.8847282 167 5 0.930438 139 5 0.939245 169 5 0.9427316 191 5 0.9624561 234 5 0.9567262 249 5 NA 0 0 0.879369 187 5 0.9282775 157 5 0.927228 160 5 1.0000000 15 0 0.9830980 163 5 0.971429 27 3 0.9369979 86 5 1.0000000 4 0 0.905556 63 5 0.983333 46 5 0.750000 8 0 0.9501984 168 5 0.8155556 46 5 0.935897 55 5 0.922547 125 5 0.9497820 253 5 0.971460 157 5 0.949206 34 4 0.8693357 156 5 0.6417669 140 5 1.000000 31 4 1.000000 14 0 0.897143 61 5 0.9708995 112 5 1.0000000 15 0 1.0000000 28 3 1.0000000 5 0 1.000000 1 0 1.000000 12 0 0.9787149 0.8590428 0.934232 1.000000 0.94781145 0.864815 0.9288811 0.8746459 0.924649 0.944896 0.938883 0.9667966 0.9514422 NA 0.891573 0.9219918 0.939086 1.0000000 0.98915989 0.947090 0.897792 1.0000000 0.958848 0.969136 0.796296 0.9425926 0.8024691 0.934473 0.923195 0.9393917 0.972485 0.958848 0.86277087 0.6544138 0.95605913 1.0000e+00 0.891887 0.9676661 1.0000000 1.0000000 1.000000 1.0000000 1.0000000 0 0.938194 0.943541 -0.00518125 5 0.942720 0.939374 0.00334665 7.4437e-01 0.16919424 insignificant 1.0000e+00 1.000000 insignificant 9.3283e-01 0.21319727 insignificant 1.0000e+00 1.00000 insignificant 0.0153597 0.5112847 lowCoverage 1 lowCoverage 0.938151 0.8501946 8.6973e-02 5 0.931264 0.8275625 1.0370e-01 1.4086e-05 9.6207e-01 weaklyHypermeth 1.6571e-04 1.0000e+00 weaklyHypermeth 3.3944e-01 6.8652e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.04138003 4.9435e-01 lowCoverage 1.0000e+00 lowCoverage 0.938151 1.000000 -0.06694807 0 0.931264 1.000000 -0.06873554 1.0000e+00 3.0705e-07 noCoverage 1.0000e+00 1.0235e-04 noCoverage 1.0000e+00 6.9282e-06 noCoverage 1.0000e+00 1.7321e-03 noCoverage -0.06209582 6.1046e-06 lowCoverage 0.00152614 lowCoverage 0.943378 0.8501946 0.0882876 5 0.927248 0.8275625 0.0996860 2.8092e-04 9.6135e-01 weaklyHypermeth 3.1213e-03 1.0000e+00 weaklyHypermeth 2.5208e-01 6.6371e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0260203 6.7501e-01 lowCoverage 1.0000e+00 lowCoverage 0.943378 1.0000000 -0.06983530 0 0.927248 1.000000 -0.0727515 9.9992e-01 1.3652e-03 noCoverage 1.0000e+00 1.3652e-01 noCoverage 1.0000e+00 5.8946e-04 noCoverage 1.0000e+00 1.1789e-01 noCoverage -0.0774556 0.00318860 lowCoverage 0.265717 lowCoverage 0.8501946 1.0000000 -0.17629756 0 0.8275625 1.0000000 -0.1724375 1.0000e+00 9.4098e-05 noCoverage 1.0000e+00 1.6224e-03 noCoverage 0.99999447 2.2028e-03 noCoverage 1.00000 4.0792e-02 noCoverage -0.10347585 1.2156e-01 lowCoverage 1.0000e+00 lowCoverage chr20 60271050 60272050 55293 OSBPL2 ENSG00000130703 0.914196 559 6 0.806638 389 6 0.889601 290 6 0.961058 475 6 0.919196 229 6 0.930809 761 6 0.9173032 224 6 0.8952395 320 6 0.889814 320 6 0.967749 189 6 0.9329804 398 6 0.9161255 150 6 0.9248052 228 6 0.940733 200 6 0.910482 298 6 0.8792039 182 6 1.000000 4 0 0.9265314 804 6 0.8732358 610 6 0.940169 605 6 0.9333333 120 6 0.9814815 53 2 0.802070 293 6 0.838010 177 6 0.957955 91 4 0.9514331 474 6 0.7139135 280 6 0.756657 192 6 0.924418 452 6 0.9290799 476 6 0.946900 426 6 0.918388 512 6 0.7421598 266 6 0.7820102 356 6 0.892157 217 6 0.952381 14 2 0.836591 359 6 0.8839574 490 6 0.9259719 764 6 0.9597107 507 6 0.8841492 425 6 0.924974 681 5 0.952789 426 6 0.9155464 0.7994421 0.899130 0.962846 0.92075737 0.936378 0.9348235 0.9214398 0.897949 0.950478 0.930243 0.9182525 0.9498974 0.941346 0.925400 0.9024235 0.969505 0.9228619 0.91697638 0.937757 0.970732 0.9559246 0.962144 0.841730 0.938837 0.9498182 0.8498574 0.923638 0.938866 0.9414510 0.952500 0.912494 0.90000077 0.8236856 0.93930030 9.0139e-01 0.934161 0.9196713 0.9639799 0.9746111 0.958008 0.9333974 0.9446368 6 0.920929 0.922968 -0.00357786 6 0.925630 0.786487 0.13914294 9.2495e-01 0.64015806 insignificant 1.0000e+00 1.000000 insignificant 9.0462e-01 0.53801323 insignificant 1.0000e+00 1.00000 insignificant 0.0289901 0.2988589 insignificant 1 insignificant 0.920918 0.8769140 4.1813e-02 6 0.913234 0.8680916 4.5143e-02 5.7884e-03 5.1338e-01 weaklyHypermeth 4.7838e-02 1.0000e+00 weaklyHypermeth 5.2094e-01 4.0313e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.06858407 8.2697e-02 insignificant 8.7975e-01 insignificant 0.920929 0.948251 -0.02837279 6 0.925630 0.907779 0.01785101 9.6018e-01 1.8244e-02 weaklyHypometh 1.0000e+00 5.5286e-01 insignificant 9.8568e-01 3.5148e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.01272560 4.5065e-01 insignificant 1.00000000 insignificant 0.922968 0.8754407 0.0447550 6 0.786487 0.7797928 0.0066938 4.8363e-02 7.0067e-01 weaklyHypermeth 3.5046e-01 1.0000e+00 insignificant 5.9101e-01 8.1418e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0395939 3.4782e-01 insignificant 1.0000e+00 insignificant 0.922448 0.9482697 -0.02425244 6 0.688176 0.919306 -0.2311304 9.9973e-01 5.9048e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9931e-01 1.9916e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0417157 0.16552349 insignificant 1.000000 insignificant 0.8754407 0.9488555 -0.06793942 6 0.7797928 0.9485949 -0.1688020 9.9803e-01 2.0205e-02 weaklyHypometh 1.0000e+00 1.8537e-01 insignificant 0.99162607 1.6105e-01 insignificant 1.00000 1.0000e+00 insignificant -0.08130967 5.0897e-02 insignificant 5.7837e-01 insignificant chr20 60360950 60361950 55296 ADRM1 ENSG00000130706 0.823992 402 11 0.921063 262 12 0.818392 315 12 0.970056 404 11 0.855568 180 9 0.924233 467 12 0.9686343 288 9 0.9209357 223 11 0.903772 249 9 0.946678 242 11 0.8739896 442 12 0.9345101 186 8 0.9853288 262 9 0.927492 187 11 0.950845 285 12 0.9028571 140 8 0.759350 79 4 0.7303900 597 14 0.8787323 513 11 0.895066 430 11 0.6123010 97 8 0.9649102 166 8 0.853103 316 10 0.793892 120 7 0.866649 239 9 0.9645938 364 15 0.6922771 186 9 0.670651 128 7 0.918227 404 11 0.9442155 367 15 0.921272 363 15 0.913213 407 11 0.4680957 338 12 0.7098919 367 14 0.666667 189 5 0.771168 126 11 0.415436 280 8 0.7597854 510 15 0.8319809 500 11 0.6690583 436 11 0.9590545 285 11 0.843394 461 11 0.591536 321 11 0.9500635 0.9062147 0.860057 0.961772 0.95129931 0.946479 0.9581554 0.9471403 0.952156 0.942745 0.928615 0.9304491 0.9657382 0.950240 0.935809 0.8503641 0.907093 0.9088006 0.95029832 0.958026 0.942060 0.9705016 0.891912 0.893822 0.961019 0.9441414 0.8798766 0.909499 0.922655 0.9636485 0.902692 0.940160 0.44312134 0.6192664 0.45476345 8.6165e-01 0.382988 0.6574110 0.9231792 0.8462205 0.953861 0.9270278 0.6806154 6 0.934277 0.917934 0.00990795 11 0.766673 0.674627 0.09204582 4.2540e-01 0.98887218 insignificant 1.0000e+00 1.000000 insignificant 2.4892e-01 0.99849150 insignificant 1.0000e+00 1.00000 insignificant 0.0516522 0.1999484 insignificant 1 insignificant 0.934277 0.5254425 4.3197e-01 11 0.789400 0.4758660 3.1353e-01 3.7088e-35 1.0000e+00 hypermethylated 2.1817e-33 1.0000e+00 hypermethylated 8.0278e-09 1.0000e+00 hypermethylated 3.6490e-07 1.0000e+00 hypermethylated 0.26275375 7.3963e-03 weaklyHypermeth 1.2976e-01 insignificant 0.934616 0.871193 0.06430247 11 0.800988 0.647580 0.15340762 1.7357e-10 1.0000e+00 weaklyHypermeth 1.9286e-08 1.0000e+00 weaklyHypermeth 9.1207e-06 1.0000e+00 weaklyHypermeth 9.1207e-04 1.0000e+00 weaklyHypermeth 0.11558969 1.5510e-01 insignificant 1.00000000 insignificant 0.918199 0.5259956 0.3603831 12 0.682942 0.5223358 0.1606065 2.0626e-17 9.9998e-01 hypermethylated 7.6394e-16 1.0000e+00 hypermethylated 1.8950e-04 1.0000e+00 hypermethylated 3.6442e-03 1.0000e+00 hypermethylated 0.2111015 1.7775e-02 weaklyHypermeth 2.6140e-01 insignificant 0.920216 0.8716284 0.04994263 11 0.885945 0.688054 0.1978909 2.6869e-08 9.9994e-01 weaklyHypermeth 2.6869e-06 1.0000e+00 weaklyHypermeth 1.9227e-03 1.0000e+00 weaklyHypermeth 8.3595e-02 1.0000e+00 weaklyHypermeth 0.0639375 0.42278242 insignificant 1.000000 insignificant 0.5281024 0.8724362 -0.36969240 11 0.6757146 0.7117023 -0.0359877 6.6025e-01 1.6379e-06 hypomethylated 1.0000e+00 4.3102e-05 hypomethylated 0.88930804 1.6509e-02 weaklyHypometh 1.00000 2.1723e-01 insignificant -0.14716406 1.3995e-01 insignificant 1.0000e+00 insignificant chr20 60364850 60365850 55297 ADRM1 ENSG00000130706 0.886778 489 15 0.714396 408 19 0.734084 604 19 0.877015 477 15 0.854074 296 15 0.857201 527 19 0.8444732 416 18 0.7811958 314 18 0.842461 386 18 0.886505 383 18 0.8693180 601 18 0.8081315 260 16 0.7574273 464 18 0.906806 129 8 0.843723 339 18 0.8728410 262 13 0.802346 174 12 0.6008265 641 17 0.7956042 346 17 0.846173 428 18 0.8595611 314 18 0.5995445 322 15 0.894851 339 19 0.869513 212 17 0.807152 445 14 0.8326092 464 19 0.8416016 293 14 0.791025 128 11 0.822710 251 16 0.8693558 441 19 0.807532 431 19 0.877469 610 18 0.0785334 590 19 0.2278038 518 17 0.048853 890 19 0.149511 225 12 0.135489 334 17 0.1968981 585 19 0.6945232 461 18 0.6602027 603 18 0.8050842 501 15 0.758738 621 17 0.602535 499 17 0.8573877 0.7029352 0.744212 0.859670 0.88779905 0.871377 0.8392555 0.7868771 0.845995 0.883761 0.865056 0.8085462 0.7385036 0.861539 0.831406 0.8613207 0.799132 0.5886344 0.77641771 0.860194 0.862315 0.6963779 0.899449 0.849598 0.767175 0.8215715 0.8266899 0.810331 0.813607 0.8626776 0.776562 0.881986 0.08441949 0.2090737 0.03628527 1.2465e-01 0.140589 0.1954087 0.6744199 0.6419404 0.764252 0.7073920 0.5501885 12 0.810297 0.808145 -0.01551115 19 0.801030 0.826084 -0.02505367 9.8432e-01 0.03043094 weaklyHypometh 1.0000e+00 1.000000 insignificant 9.6654e-01 0.29962822 insignificant 1.0000e+00 1.00000 insignificant -0.0036747 0.8956930 insignificant 1 insignificant 0.810297 0.1279440 6.7671e-01 19 0.801030 0.1416608 6.5937e-01 7.1299e-155 1.0000e+00 hypermethylated 7.1299e-152 1.0000e+00 hypermethylated 3.3420e-44 1.0000e+00 hypermethylated 3.3420e-41 1.0000e+00 hypermethylated 0.67955436 7.4104e-09 hypermethylated 6.7367e-07 hypermethylated 0.810297 0.641341 0.13360794 17 0.801030 0.700841 0.10018874 7.8129e-10 9.9660e-01 weaklyHypermeth 7.8129e-08 1.0000e+00 weaklyHypermeth 1.3855e-07 9.9573e-01 weaklyHypermeth 1.9794e-05 1.0000e+00 weaklyHypermeth 0.11485237 2.7562e-02 weaklyHypermeth 0.52004538 insignificant 0.808145 0.1279440 0.6805272 19 0.826084 0.1416608 0.6844230 5.6865e-130 1.0000e+00 hypermethylated 5.6865e-127 1.0000e+00 hypermethylated 4.0121e-38 1.0000e+00 hypermethylated 4.0121e-35 1.0000e+00 hypermethylated 0.6832291 5.0907e-10 hypermethylated 1.0181e-07 hypermethylated 0.808145 0.6413408 0.16028743 17 0.826084 0.700841 0.1252424 7.0862e-13 1.0000e+00 weaklyHypermeth 1.3310e-10 1.0000e+00 weaklyHypermeth 1.4446e-08 9.9997e-01 weaklyHypermeth 4.8155e-06 1.0000e+00 weaklyHypermeth 0.1185271 0.02479581 weaklyHypermeth 0.587083 insignificant 0.1279440 0.6413408 -0.51988619 17 0.1416608 0.7008413 -0.5591806 1.0000e+00 3.0971e-61 hypomethylated 1.0000e+00 3.0971e-58 hypomethylated 1.00000000 1.1100e-22 hypomethylated 1.00000 1.1100e-19 hypomethylated -0.56470200 1.6437e-06 hypomethylated 3.2875e-04 hypomethylated chr20 60366450 60367450 55298 ADRM1 ENSG00000130706 0.884450 236 10 0.735881 272 10 0.798609 172 11 0.885367 176 9 0.893074 70 8 0.914260 339 11 0.8515300 129 10 0.8929752 180 11 0.798935 87 7 0.897891 138 11 0.9066458 412 11 0.7779244 76 7 0.9055148 276 11 0.883833 86 6 0.902932 111 11 0.8915344 55 3 0.916667 22 1 0.8006480 383 10 0.8751879 313 11 0.873717 294 11 0.8933697 154 10 0.7984127 82 3 0.941486 178 11 0.909674 100 10 0.707717 203 3 0.9048691 321 10 0.8833007 195 11 0.849206 54 4 0.910254 305 10 0.9016710 342 11 0.899657 370 11 0.906007 314 11 0.6568506 217 11 0.8353152 322 11 0.695689 242 11 0.577891 92 6 0.785187 146 11 0.6169067 428 11 0.8172339 125 10 0.8108849 281 10 0.8174501 102 7 0.815943 244 8 0.724561 120 7 0.8577164 0.7301729 0.748775 0.854061 0.86292517 0.870138 0.6688425 0.8753015 0.805189 0.878643 0.901484 0.7599461 0.8960894 0.840783 0.879015 0.7329452 0.848093 0.7754373 0.84844688 0.903401 0.876120 0.8222175 0.889253 0.903323 0.719061 0.9031262 0.8942893 0.724206 0.868637 0.8826297 0.899286 0.893916 0.68150437 0.7641497 0.72916068 6.5146e-01 0.766839 0.6752033 0.7789534 0.7855752 0.784233 0.8278203 0.7896527 2 0.854455 0.889992 -0.03162863 11 0.866266 0.896478 -0.03021151 9.9765e-01 0.00694381 weaklyHypometh 1.0000e+00 0.837852 insignificant 9.9711e-01 0.01149423 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.0110899 0.6173286 insignificant 1 insignificant 0.854455 0.7228749 1.3993e-01 11 0.866266 0.7079642 1.5830e-01 2.2254e-14 9.9091e-01 weaklyHypermeth 5.4278e-13 1.0000e+00 weaklyHypermeth 1.0190e-04 9.5871e-01 weaklyHypermeth 1.8871e-03 1.0000e+00 weaklyHypermeth 0.16973879 7.2179e-03 weaklyHypermeth 1.2889e-01 insignificant 0.854455 0.803899 0.05242701 10 0.866266 0.808613 0.05765253 5.2349e-05 8.4322e-01 weaklyHypermeth 1.6359e-03 1.0000e+00 weaklyHypermeth 5.0272e-03 8.2674e-01 weaklyHypermeth 1.5234e-01 1.0000e+00 insignificant 0.06716410 1.5255e-02 weaklyHypermeth 0.41300287 insignificant 0.889992 0.7228749 0.1567445 11 0.896478 0.7079642 0.1885134 2.6650e-13 9.9992e-01 weaklyHypermeth 7.0133e-12 1.0000e+00 weaklyHypermeth 1.4775e-04 9.9971e-01 weaklyHypermeth 2.9550e-03 1.0000e+00 weaklyHypermeth 0.1808287 4.5493e-03 weaklyHypermeth 9.2844e-02 weaklyHypermeth 0.889992 0.8038991 0.07167346 10 0.896478 0.808613 0.0878640 2.6613e-07 9.7571e-01 weaklyHypermeth 1.9010e-05 1.0000e+00 weaklyHypermeth 1.5028e-03 9.8237e-01 weaklyHypermeth 6.8308e-02 1.0000e+00 weaklyHypermeth 0.0782540 0.01078892 weaklyHypermeth 0.458068 insignificant 0.7228749 0.8038991 -0.08574540 10 0.7079642 0.8086135 -0.1006493 9.9347e-01 2.7746e-03 weaklyHypometh 1.0000e+00 3.1559e-02 weaklyHypometh 0.99003796 4.7145e-02 weaklyHypometh 1.00000 4.9109e-01 insignificant -0.10257469 5.4641e-02 insignificant 6.1394e-01 insignificant chr20 60376950 60377950 55300 LAMA5 ENSG00000130702 0.080349 141 7 0.152381 189 10 0.102981 197 9 0.086310 23 2 0.065432 90 8 0.159465 252 9 0.0432099 108 8 0.0293974 158 9 0.139731 65 6 0.082407 209 9 0.1496323 130 11 0.1745904 143 6 0.0000000 137 4 0.147796 104 7 0.030008 322 10 0.0000000 19 2 0.000000 2 0 0.0575397 152 5 0.0423160 105 8 0.050374 346 7 0.0619048 96 7 0.0000000 11 0 0.097569 77 7 0.045635 79 8 0.025641 35 2 0.0202020 100 7 0.0722222 114 7 0.014286 34 3 0.016146 77 5 0.2166667 126 8 0.033800 257 11 0.155429 186 8 0.0264550 118 7 0.0125000 55 7 0.000000 70 3 1.000000 1 0 0.113054 92 8 0.1101954 284 10 0.0237292 242 7 0.1342763 198 9 0.0389610 109 6 0.094444 55 3 0.254422 211 6 0.2372093 0.0011628 0.134085 0.158739 0.19586563 0.100775 0.1147287 0.0532300 0.083157 0.223256 0.157487 0.3007752 0.0000000 0.190698 0.093023 0.0000000 0.115537 0.0620155 0.04490084 0.062720 0.198007 0.0000000 0.113695 0.135382 0.057245 0.0676533 0.1488372 0.053156 0.048062 0.0620155 0.080890 0.201586 0.05857020 0.0000000 0.00000000 NA 0.000000 0.1428181 0.0809089 0.2315359 0.076110 0.0155039 0.2208195 0 0.053670 0.058725 -0.00262167 10 0.130881 0.122808 0.00807367 3.7623e-01 0.56907359 insignificant 1.0000e+00 1.000000 insignificant 3.9942e-01 0.64915450 insignificant 1.0000e+00 1.00000 insignificant 0.0164041 0.4782297 insignificant 1 insignificant 0.053361 0.0596774 5.0241e-03 9 0.116420 0.1147447 1.6757e-03 3.6174e-01 2.5454e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.3377e-01 6.6762e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.13067137 4.5001e-01 insignificant 1.0000e+00 insignificant 0.053361 0.051534 0.02312617 6 0.116420 0.085466 0.03095454 1.3927e-01 7.6506e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.4128e-01 9.3594e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02947058 5.2743e-01 insignificant 1.00000000 insignificant 0.058972 0.0597738 0.0032771 10 0.141701 0.1235712 0.0181298 3.5365e-01 1.0720e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.2046e-01 6.3128e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.1470755 3.9986e-01 insignificant 1.0000e+00 insignificant 0.058972 0.0515971 0.01823936 6 0.141701 0.092040 0.0496609 5.9310e-02 8.6001e-01 insignificant 8.5055e-01 1.0000e+00 insignificant 2.1740e-01 9.2359e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0458747 0.35292357 insignificant 1.000000 insignificant 0.0596774 0.0515337 -0.01300963 6 0.1147447 0.0854658 0.0292789 9.0854e-01 9.3296e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.82030331 8.9826e-01 insignificant 1.00000 1.0000e+00 insignificant 0.10120079 5.6223e-01 insignificant 1.0000e+00 insignificant chr20 60385850 60386850 55301 LAMA5 ENSG00000130702 0.899502 317 7 0.873898 117 7 0.902635 97 7 0.882438 312 7 0.679114 50 4 0.817818 346 7 0.6128180 112 7 0.9266953 128 7 0.834455 98 6 0.902452 111 7 0.8478128 217 8 0.7630231 60 6 0.9380952 105 6 0.803401 46 3 0.767637 128 7 0.7380952 27 2 0.916667 16 1 0.8267652 536 7 0.9046139 228 7 0.783813 219 7 0.9456790 135 7 0.7494682 127 7 0.923587 158 7 0.876134 82 6 0.826954 275 7 0.8634605 170 7 0.7377276 136 7 0.799784 66 6 0.901322 185 7 0.9102951 175 7 0.878100 148 7 0.889599 230 7 0.4148817 153 7 0.2488744 255 7 0.510979 355 7 0.649411 126 6 0.544213 131 8 0.7043275 249 7 0.7134211 233 7 0.8204067 314 7 0.8842132 171 7 0.797953 320 7 0.796946 203 7 0.8783391 0.7758854 0.886142 0.871935 0.82054600 0.909947 0.8032189 0.8981003 0.809360 0.845677 0.825057 0.7148018 0.9149763 0.870247 0.777974 0.8084223 0.856084 0.8019864 0.86839803 0.853548 0.924753 0.7151415 0.893446 0.895653 0.852565 0.8685976 0.7883593 0.851735 0.898909 0.8848390 0.835188 0.895666 0.57634266 0.4229847 0.52274824 6.3698e-01 0.569667 0.7095068 0.8790727 0.8032619 0.855111 0.8357636 0.8369667 5 0.852590 0.865925 -0.01185425 7 0.787234 0.877801 -0.09056686 8.7309e-01 0.20247618 insignificant 1.0000e+00 1.000000 insignificant 8.7900e-01 0.21224625 insignificant 1.0000e+00 1.00000 insignificant -0.0274217 0.3253722 insignificant 1 insignificant 0.852248 0.5791962 2.4916e-01 7 0.737588 0.5366278 2.0096e-01 9.7354e-15 1.0000e+00 hypermethylated 2.4338e-13 1.0000e+00 hypermethylated 1.0393e-05 1.0000e+00 hypermethylated 2.3096e-04 1.0000e+00 hypermethylated 0.31897307 4.0902e-03 weaklyHypermeth 8.1805e-02 weaklyHypermeth 0.852635 0.833871 0.01962028 7 0.804964 0.660321 0.14464309 6.1825e-02 8.1095e-01 insignificant 9.5115e-01 1.0000e+00 insignificant 4.7660e-01 8.3097e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02849937 4.1923e-01 insignificant 1.00000000 insignificant 0.865925 0.5786561 0.2892921 7 0.877801 0.5011626 0.3766379 4.4670e-14 1.0000e+00 hypermethylated 1.3138e-12 1.0000e+00 hypermethylated 3.9318e-07 1.0000e+00 hypermethylated 1.5727e-05 1.0000e+00 hypermethylated 0.3463948 2.7780e-03 weaklyHypermeth 6.6143e-02 weaklyHypermeth 0.865925 0.8345440 0.02997552 7 0.877801 0.720350 0.1574502 2.7699e-01 9.1658e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.0198e-01 9.0709e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0559211 0.13232629 insignificant 1.000000 insignificant 0.5786561 0.8345440 -0.24766653 7 0.5011626 0.7203503 -0.2191877 9.9656e-01 5.3093e-04 hypomethylated 1.0000e+00 7.5847e-03 hypomethylated 0.99976760 4.4964e-03 weaklyHypometh 1.00000 7.3711e-02 weaklyHypometh -0.29047370 5.8977e-03 weaklyHypometh 1.3433e-01 insignificant chr20 60427650 60428650 55304 CABLES2 ENSG00000149679 0.702110 155 7 0.904606 87 5 0.647619 52 5 0.877096 222 8 0.857143 25 0 0.942538 162 8 0.7397436 43 3 0.8843537 55 6 0.923611 60 4 0.725758 47 4 0.9535014 120 7 0.7761905 24 3 0.9392130 117 6 1.000000 4 0 0.594444 43 4 0.9642857 22 3 1.000000 13 0 0.9131899 181 7 0.7973997 90 8 0.940308 98 4 0.7739068 66 4 0.7324229 47 4 0.949286 98 5 0.957143 40 4 0.981304 86 4 0.9107997 112 10 0.8277778 43 4 0.833333 14 0 0.885714 45 6 0.8733320 112 7 0.905171 107 10 0.868817 209 7 0.6798962 65 5 0.6625325 117 6 0.456416 180 7 0.644205 99 7 0.830952 31 3 0.5722463 116 10 0.8616893 169 7 0.8376647 204 7 0.9488604 141 7 0.957181 143 4 0.862975 176 7 0.8881122 0.8423450 0.828283 0.875632 1.00000000 0.894195 0.6743257 0.9628942 0.929654 0.834711 0.937662 0.6051948 0.9451659 0.897834 0.888312 0.9610390 1.000000 0.8919120 0.88507795 0.863330 0.823455 0.7264580 0.950636 0.944341 0.977753 0.9465026 0.8278499 0.800866 0.905844 0.9327389 0.932059 0.886622 0.80216450 0.5750139 0.26888889 6.0824e-01 0.721645 0.6415235 0.9100562 0.9241227 0.935098 0.9069279 0.9193686 0 0.880864 0.907787 -0.02757897 4 0.892985 0.898392 -0.00540734 8.1980e-01 0.34674249 lowCoverage 1.0000e+00 1.000000 lowCoverage 7.8111e-01 0.43537311 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.0207619 0.5487871 lowCoverage 1 lowCoverage 0.880864 0.6584158 2.9414e-01 4 0.892985 0.5743141 3.1867e-01 1.1011e-15 9.7941e-01 lowCoverage 3.0585e-14 1.0000e+00 lowCoverage 3.9415e-05 9.7778e-01 lowCoverage 8.0439e-04 1.0000e+00 lowCoverage 0.21311413 5.8292e-03 lowCoverage 1.0998e-01 lowCoverage 0.880864 0.900240 -0.01936407 4 0.892985 0.913731 -0.02074666 6.7282e-01 5.3710e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.5838e-01 5.3155e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.03951863 2.9488e-01 lowCoverage 1.00000000 lowCoverage 0.907975 0.6562500 0.3166004 4 0.906208 0.5301361 0.3760719 1.6642e-13 9.9992e-01 lowCoverage 4.4977e-12 1.0000e+00 lowCoverage 4.2868e-05 9.9997e-01 lowCoverage 9.5263e-04 1.0000e+00 lowCoverage 0.2338760 3.9607e-03 weaklyHypermeth 8.6103e-02 weaklyHypermeth 0.906858 0.8991597 -0.00105092 4 0.829285 0.843444 -0.0141594 8.7731e-01 6.7237e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.6268e-01 6.4843e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0187568 0.57825906 insignificant 1.000000 insignificant 0.6584158 0.9002404 -0.28081799 7 0.5743141 0.9137313 -0.3394172 7.4712e-01 6.3874e-08 hypomethylated 1.0000e+00 2.0604e-06 hypomethylated 0.99989237 4.0915e-04 hypomethylated 1.00000 1.3198e-02 hypomethylated -0.25263276 2.6950e-03 weaklyHypometh 9.6252e-02 weaklyHypometh chr20 60455650 60456650 55305 C20orf151 ENSG00000130701 0.889976 905 18 0.693314 408 14 0.668109 179 10 0.925785 598 11 0.655728 79 7 0.743463 671 14 0.9288194 49 3 0.8937193 444 20 0.917182 121 11 0.803512 158 6 0.8780421 892 21 0.8013393 35 1 0.8463101 532 21 0.890774 262 19 0.812118 187 14 0.3000000 33 3 0.400000 15 1 0.8588586 1617 20 0.9004265 983 21 0.788142 641 11 0.8332899 176 15 0.7904944 130 6 0.874695 149 10 0.800541 181 14 0.873105 410 15 0.9193383 695 15 0.6363628 221 12 0.638333 44 3 0.853638 617 17 0.9286870 808 21 0.943134 798 21 0.911187 694 17 0.6909656 356 14 0.6330070 635 20 0.691716 188 10 0.843750 26 1 0.544247 399 20 0.7687845 1038 21 0.8287414 268 16 0.8765808 527 11 0.8791433 621 11 0.770122 228 11 0.798557 371 17 0.8898081 0.8100613 0.677224 0.896384 0.60521229 0.915867 0.8368298 0.9127073 0.861737 0.923297 0.858546 0.8015120 0.8036209 0.840337 0.849168 0.6318517 NA 0.8873062 0.91902689 0.919935 0.878558 0.8764626 0.867050 0.714369 0.900577 0.8983093 0.7697324 0.593007 0.922584 0.8803299 0.919368 0.911588 0.74174758 0.6582224 0.65242949 6.8820e-01 0.583593 0.8627471 0.7534173 0.8495780 0.853095 0.8348254 0.8629580 1 0.878165 0.903075 -0.02871688 19 0.799755 0.895318 -0.09556357 9.9965e-01 0.01925128 weaklyHypometh 1.0000e+00 1.000000 insignificant 9.9991e-01 0.06688391 insignificant 1.0000e+00 1.00000 insignificant -0.0537862 0.2746511 insignificant 1 insignificant 0.878237 0.6825939 2.0028e-01 20 0.829375 0.6833830 1.4599e-01 8.4901e-26 9.9999e-01 hypermethylated 3.8591e-24 1.0000e+00 hypermethylated 1.9911e-04 9.9907e-01 hypermethylated 3.4931e-03 1.0000e+00 hypermethylated 0.08436924 1.6113e-01 insignificant 1.0000e+00 insignificant 0.878409 0.833747 0.04596250 11 0.849714 0.830850 0.01886348 1.5417e-03 9.0698e-01 weaklyHypermeth 4.0570e-02 1.0000e+00 weaklyHypermeth 9.9502e-02 7.1437e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.05084810 2.5571e-01 insignificant 1.00000000 insignificant 0.902484 0.6819387 0.2309954 19 0.850675 0.6411193 0.2095561 4.0807e-27 1.0000e+00 hypermethylated 2.4004e-25 1.0000e+00 hypermethylated 2.5982e-05 1.0000e+00 hypermethylated 6.1863e-04 1.0000e+00 hypermethylated 0.1381555 2.3835e-02 weaklyHypermeth 3.4050e-01 insignificant 0.902897 0.8337469 0.07547363 11 0.877871 0.830850 0.0470210 1.6268e-08 9.8190e-01 weaklyHypermeth 1.8075e-06 1.0000e+00 weaklyHypermeth 3.8348e-03 9.3385e-01 weaklyHypermeth 1.3790e-01 1.0000e+00 insignificant 0.0029381 0.93739977 insignificant 1.000000 insignificant 0.6831307 0.8337469 -0.16102196 11 0.7063059 0.8308503 -0.1245444 9.9544e-01 1.6954e-06 weaklyHypometh 1.0000e+00 4.3472e-05 weaklyHypometh 0.99777233 9.1075e-03 weaklyHypometh 1.00000 1.3593e-01 insignificant -0.13521734 2.3983e-02 weaklyHypometh 3.4759e-01 insignificant chr20 60495950 60496950 55307 GATA5 ENSG00000130700 0.696758 93 4 0.462726 170 5 0.723446 133 5 0.407738 68 3 0.579940 153 4 0.612351 180 5 0.5999620 158 5 0.6355714 141 5 0.737427 91 5 0.706250 78 4 0.7505275 217 5 0.6656678 143 5 0.5276905 124 4 0.661538 41 3 0.567344 112 5 0.6617610 131 5 0.540556 125 3 0.5184343 79 3 0.8103233 164 5 0.758728 128 4 0.7142059 98 5 0.5416667 9 1 0.533670 88 4 0.627183 77 5 0.444444 8 0 0.5871219 197 5 0.7039072 63 5 0.821523 57 5 0.675196 129 5 0.4093356 199 5 0.704719 205 5 0.919676 158 3 0.3101547 175 5 0.6367743 136 5 0.337129 106 6 0.262500 21 3 0.687586 128 5 0.5366959 188 5 0.3841367 153 3 0.6758748 125 4 0.2725000 40 2 0.217373 89 2 0.270923 91 3 0.8213726 0.7075133 0.739759 0.637931 0.51859991 0.653039 0.7288933 0.6395936 0.716399 0.622229 0.729296 0.6313884 0.4546028 0.505709 0.523760 0.6295962 0.545414 0.5005617 0.79204332 0.662175 0.691080 0.2873563 0.700758 0.574379 0.572220 0.6393899 0.6926866 0.787666 0.685486 0.5288701 0.703805 0.931992 0.39710960 0.6642983 0.47523482 1.3969e-01 0.463290 0.5120968 0.5035644 0.5049322 0.165948 0.2145467 0.3823856 1 0.650178 0.672883 -0.01170353 5 0.543710 0.640359 -0.09664987 8.4322e-01 0.57976188 insignificant 1.0000e+00 1.000000 insignificant 8.0048e-01 0.66602783 insignificant 1.0000e+00 1.00000 insignificant -0.0089837 0.8563221 lowCoverage 1 lowCoverage 0.649901 0.4641910 1.8435e-01 5 0.478525 0.5014507 -2.2925e-02 1.5667e-06 9.9882e-01 weaklyHypermeth 1.9832e-05 1.0000e+00 weaklyHypermeth 3.1099e-03 8.1991e-01 weaklyHypermeth 3.9870e-02 1.0000e+00 weaklyHypermeth 0.16943029 7.2318e-02 lowCoverage 7.9668e-01 lowCoverage 0.649901 0.466801 0.23455528 3 0.478525 0.256280 0.22224561 1.2973e-09 9.7997e-01 lowCoverage 1.1793e-07 1.0000e+00 lowCoverage 2.2702e-05 9.9340e-01 lowCoverage 1.7463e-03 1.0000e+00 lowCoverage 0.26707555 2.8997e-02 lowCoverage 0.53341365 lowCoverage 0.672628 0.4641910 0.1989727 5 0.588982 0.5014507 0.0875316 1.0257e-04 9.8005e-01 weaklyHypermeth 1.2358e-03 1.0000e+00 weaklyHypermeth 8.0750e-03 9.8611e-01 weaklyHypermeth 1.0222e-01 1.0000e+00 insignificant 0.1784140 6.9098e-02 lowCoverage 7.8521e-01 lowCoverage 0.672883 0.4678715 0.25127706 3 0.640359 0.349245 0.2911148 1.0995e-05 9.9810e-01 lowCoverage 4.9979e-04 1.0000e+00 lowCoverage 6.2292e-04 9.9992e-01 lowCoverage 3.8932e-02 1.0000e+00 lowCoverage 0.2760593 0.02366737 lowCoverage 0.577253 lowCoverage 0.4641910 0.4668008 0.01103481 3 0.5014507 0.2562796 0.2451710 4.4311e-02 3.2053e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.04157806 6.2207e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.09764526 4.0305e-01 lowCoverage 1.0000e+00 lowCoverage chr20 60502650 60503650 55308 GATA5 ENSG00000130700 0.845349 453 8 0.671602 434 8 0.754679 376 8 0.765517 445 8 0.714827 327 8 0.824049 589 8 0.6805206 307 8 0.6397714 442 8 0.685748 372 8 0.814231 394 8 0.6998627 599 8 0.8302438 259 6 0.6996983 423 8 0.735622 349 8 0.805342 436 8 0.7536196 254 6 0.690476 12 0 0.7279221 702 8 0.6791626 527 8 0.818596 395 8 0.6741172 234 9 0.7398530 184 6 0.693324 289 8 0.729866 272 8 0.829480 142 8 0.6781191 569 8 0.6379696 582 8 0.753624 192 7 0.771142 457 8 0.7268654 645 8 0.745825 497 8 0.873432 473 8 0.6185054 448 8 0.8058759 261 8 0.789621 296 7 0.610417 35 3 0.703714 521 8 0.6804095 612 8 0.8720781 390 8 0.8266720 394 8 0.7972028 434 8 0.740564 431 8 0.786303 362 8 0.9015188 0.7647253 0.850849 0.869376 0.82559979 0.888330 0.8367007 0.8107754 0.818574 0.891316 0.858149 0.9183402 0.8597335 0.891917 0.871752 0.7774119 0.887036 0.8349390 0.87336530 0.881640 0.778261 0.8789863 0.905029 0.813134 0.914460 0.8704186 0.7991311 0.951860 0.883176 0.8091270 0.896358 0.908825 0.77462062 0.8706020 0.87748230 7.2710e-01 0.737211 0.8684702 0.9351004 0.9009524 0.880671 0.8972415 0.8511993 6 0.796788 0.799912 -0.01235950 8 0.734458 0.632245 0.10221284 7.9652e-01 0.43489076 insignificant 1.0000e+00 1.000000 insignificant 7.9572e-01 0.22319158 insignificant 1.0000e+00 1.00000 insignificant 0.0040406 0.8659481 insignificant 1 insignificant 0.796788 0.6887661 7.6872e-02 8 0.734458 0.6919619 4.2496e-02 4.2195e-03 9.4674e-01 weaklyHypermeth 3.6691e-02 1.0000e+00 weaklyHypermeth 1.9381e-01 3.1946e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.04041822 3.0692e-01 insignificant 1.0000e+00 insignificant 0.797451 0.767280 -0.03929458 8 0.758982 0.799979 -0.04099703 9.9836e-01 3.2019e-03 weaklyHypometh 1.0000e+00 1.6010e-01 insignificant 9.9902e-01 7.0525e-03 weaklyHypometh 1.0000e+00 3.3583e-01 insignificant -0.06272194 4.3135e-02 weaklyHypometh 0.63433687 insignificant 0.799956 0.6889093 0.0937468 8 0.665677 0.7199653 -0.0542879 1.4981e-02 7.7754e-01 weaklyHypermeth 1.2381e-01 1.0000e+00 insignificant 1.6966e-01 3.3826e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0363777 3.7510e-01 insignificant 1.0000e+00 insignificant 0.801993 0.7672800 -0.01999649 8 0.779890 0.799979 -0.0200888 9.6048e-01 4.1819e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.5188e-01 1.0554e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0667625 0.04337097 weaklyHypometh 0.791062 insignificant 0.6887967 0.7672800 -0.12881807 8 0.6774523 0.7999786 -0.1225263 9.9991e-01 3.2720e-03 weaklyHypometh 1.0000e+00 3.6355e-02 weaklyHypometh 0.97235924 5.6930e-02 insignificant 1.00000 5.5272e-01 insignificant -0.10314016 3.2699e-02 weaklyHypometh 4.4048e-01 insignificant chr20 60520350 60521350 55310 GATA5 ENSG00000130700 0.870224 329 8 0.782450 173 4 0.826674 128 4 0.878902 336 8 0.824868 120 4 0.763516 345 7 0.9197628 186 4 0.5839559 147 4 0.830781 122 3 0.865347 114 4 0.9060532 207 4 0.8892370 56 3 0.7654042 166 4 0.872445 87 3 0.649254 130 4 0.8529412 59 3 0.464286 11 1 0.7974482 366 6 0.7496933 165 6 0.911225 268 6 0.5941085 110 4 0.7857143 63 2 0.647925 165 4 0.606305 112 4 0.513685 46 2 0.8915406 227 10 0.8469516 118 4 0.837464 66 3 0.912906 134 3 0.7868865 228 5 0.818081 231 4 0.926079 326 11 0.1798902 206 4 0.0722997 134 3 0.280724 240 5 0.541701 227 7 0.219913 195 4 0.5800495 352 11 0.7021567 405 8 0.8230020 309 8 0.7960423 225 9 0.657353 317 6 0.656057 221 7 0.8864623 0.7625043 0.866131 0.872909 0.84108026 0.910517 0.9136304 0.8373376 0.790470 0.874806 0.861989 0.8551346 0.7874350 0.885730 0.746071 0.7478444 0.636193 0.7914034 0.82555019 0.831903 0.766583 0.8269909 0.864216 0.741745 0.641887 0.8205777 0.8137232 0.781258 0.888943 0.8972107 0.807454 0.916667 0.19124288 0.1253107 0.25099842 5.2523e-01 0.331514 0.1521395 0.8073099 0.7456356 0.772840 0.5969668 0.7059232 3 0.847863 0.840373 0.00267499 4 0.763589 0.772307 -0.00871748 7.1845e-01 0.54385397 lowCoverage 1.0000e+00 1.000000 lowCoverage 8.6165e-01 0.46053885 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.0362528 0.4563324 lowCoverage 1 lowCoverage 0.848148 0.3168390 5.4698e-01 7 0.835018 0.5030955 3.3192e-01 3.2052e-39 9.9996e-01 hypermethylated 2.2895e-37 1.0000e+00 hypermethylated 4.6405e-10 1.0000e+00 hypermethylated 2.4423e-08 1.0000e+00 hypermethylated 0.48779383 1.4002e-03 lowCoverage 3.1116e-02 lowCoverage 0.848831 0.794576 0.10115058 7 0.880019 0.723175 0.15684448 1.5207e-05 9.4342e-01 weaklyHypermeth 5.6322e-04 1.0000e+00 weaklyHypermeth 1.2615e-03 9.9736e-01 weaklyHypermeth 4.5053e-02 1.0000e+00 weaklyHypermeth 0.07330120 1.2709e-01 lowCoverage 1.00000000 lowCoverage 0.842047 0.3165680 0.5946971 4 0.806074 0.5033336 0.3027402 1.8364e-27 9.9998e-01 lowCoverage 1.1478e-25 1.0000e+00 lowCoverage 3.8305e-09 1.0000e+00 lowCoverage 1.9152e-07 1.0000e+00 lowCoverage 0.4515411 1.5443e-03 lowCoverage 3.8607e-02 lowCoverage 0.842047 0.7947154 0.11920033 4 0.748497 0.742948 0.0055493 9.6413e-06 9.9126e-01 lowCoverage 4.8206e-04 1.0000e+00 lowCoverage 3.9476e-04 9.9978e-01 lowCoverage 3.1934e-02 1.0000e+00 lowCoverage 0.0370484 0.49763506 lowCoverage 1.000000 lowCoverage 0.3170732 0.7945763 -0.42180592 7 0.5417951 0.7231746 -0.1813795 9.9996e-01 4.6529e-11 hypomethylated 1.0000e+00 2.4489e-09 hypomethylated 0.99999547 3.1510e-05 hypomethylated 1.00000 1.8536e-03 hypomethylated -0.41449263 2.8959e-03 weaklyHypometh 9.9860e-02 weaklyHypometh chr20 60597250 60598250 55312 ENSG00000218141 0.822148 192 7 0.572518 151 8 0.758485 186 7 0.718292 223 8 0.735307 132 5 0.885229 241 8 0.6637779 141 5 0.9408596 193 7 0.773214 156 5 0.828331 170 5 0.8565599 218 7 0.8798942 40 5 0.9367043 211 5 0.925663 152 5 0.674122 235 5 0.6060606 23 2 0.500000 6 0 0.6520414 236 7 0.8966321 228 7 0.915462 151 5 0.8015724 88 6 0.6887566 119 4 0.818472 120 7 0.863972 71 5 0.822778 89 6 0.8934284 284 7 0.8785714 103 4 0.640159 69 4 0.801134 162 7 0.8765324 343 8 0.902803 281 7 0.873627 168 7 0.2034354 201 7 0.1993464 100 7 0.000000 431 5 0.055556 47 4 0.279809 267 8 0.3438775 232 7 0.6756079 199 7 0.8721409 129 8 0.9230466 123 5 0.798000 164 5 0.691225 139 8 0.9178120 0.6998026 0.697455 0.935313 0.86836722 0.878371 0.8710831 0.9137462 0.819261 0.933304 0.834565 0.8827995 0.9129246 0.881602 0.831560 0.8431297 0.699288 0.7436170 0.93441675 0.858446 0.828871 0.7816811 0.926006 0.782400 0.957425 0.8869773 0.8112277 0.854921 0.862449 0.8666796 0.868870 0.914008 0.17409249 0.1013988 0.02892065 1.1682e-02 0.112887 0.2739497 0.8910966 0.8519065 0.897537 0.8442481 0.5753452 4 0.843227 0.865050 -0.01311956 7 0.646620 0.745516 -0.09889567 9.3726e-01 0.15981560 insignificant 1.0000e+00 1.000000 insignificant 6.7743e-01 0.14233045 insignificant 1.0000e+00 1.00000 insignificant -0.0447521 0.2472032 insignificant 1 insignificant 0.843740 0.1431925 7.1310e-01 7 0.700505 0.2213557 4.7915e-01 7.3080e-59 9.9995e-01 hypermethylated 1.2180e-56 1.0000e+00 hypermethylated 1.1748e-14 9.9999e-01 hypermethylated 2.3496e-12 1.0000e+00 hypermethylated 0.59672772 7.5373e-06 hypermethylated 3.4261e-04 hypermethylated 0.844227 0.823607 0.01715885 7 0.705607 0.674611 0.03099598 2.9063e-01 9.6192e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.5606e-01 9.6107e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01493920 8.0035e-01 insignificant 1.00000000 insignificant 0.864979 0.1431925 0.7129278 7 0.724309 0.2213557 0.5029534 2.2352e-47 1.0000e+00 hypermethylated 4.4704e-45 1.0000e+00 hypermethylated 2.6142e-12 1.0000e+00 hypermethylated 4.3571e-10 1.0000e+00 hypermethylated 0.6414798 1.1156e-05 hypermethylated 5.0742e-04 hypermethylated 0.865821 0.8236074 0.03093997 7 0.769171 0.674611 0.0945604 4.4852e-02 7.3503e-01 weaklyHypermeth 7.1194e-01 1.0000e+00 insignificant 2.6680e-01 7.6653e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0298129 0.60149696 insignificant 1.000000 insignificant 0.1436421 0.8236074 -0.67544387 7 0.2656268 0.6746106 -0.4089838 9.9999e-01 1.2849e-22 hypomethylated 1.0000e+00 1.8356e-20 hypomethylated 0.99999998 4.4558e-08 hypomethylated 1.00000 6.3655e-06 hypomethylated -0.61166691 1.4080e-05 hypomethylated 1.5645e-03 hypomethylated chr20 60753450 60754450 55316 ENSG00000167046 0.765373 173 8 0.316715 162 6 0.674541 141 6 0.315443 80 1 0.047619 16 1 0.458535 117 4 0.2361111 28 1 0.2325581 43 1 0.062500 34 1 0.708333 13 1 0.4736842 65 1 0.3333333 9 1 0.0476190 21 1 0.129630 20 1 0.250000 28 1 0.6666667 12 1 NA 0 0 0.3234718 182 5 0.3483146 89 1 0.279762 67 3 0.1200000 31 1 0.2000000 5 1 0.269078 106 6 0.245902 61 1 0.206522 92 1 0.3009031 152 6 0.3181818 38 1 0.354167 16 1 0.325000 80 1 0.1236518 181 6 0.257554 185 6 0.787241 122 8 0.0000000 119 6 0.0000000 61 1 0.044444 67 5 0.000000 12 0 0.000000 68 1 0.0200000 144 6 0.5896820 164 6 0.2337662 80 7 0.3015873 78 4 0.449311 147 1 0.361177 116 6 0.4230769 0.3493976 0.451613 0.338983 0.14285714 0.280000 0.2083333 0.2325581 0.187500 0.416667 0.421053 0.3333333 0.0476190 0.388889 0.250000 0.6666667 NA 0.2479339 0.34831461 0.125000 0.360000 0.2000000 0.285714 0.245902 0.206522 0.2833333 0.2727273 0.416667 0.325000 0.0468750 0.207317 0.666667 0.00000000 0.0000000 0.00000000 NA 0.000000 0.0000000 0.3157895 0.2380952 0.214286 0.0944882 0.0952381 1 0.380000 0.308989 0.07161510 1 0.402647 0.346178 0.05646951 8.2445e-02 0.99964049 lowCoverage 1.0000e+00 1.000000 lowCoverage 5.3846e-01 0.99937767 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.0587137 0.4179806 lowCoverage 1 lowCoverage 0.382879 0.0063694 3.7628e-01 1 0.463515 0.0213018 4.4221e-01 2.3235e-13 1.0000e+00 lowCoverage 5.2806e-12 1.0000e+00 lowCoverage 3.0288e-06 1.0000e+00 lowCoverage 8.1482e-05 1.0000e+00 lowCoverage 0.34032291 2.7998e-06 lowCoverage 1.4736e-04 lowCoverage 0.380650 0.314530 0.09482572 1 0.479608 0.338453 0.14115564 9.7795e-03 9.5957e-01 lowCoverage 1.9559e-01 1.0000e+00 lowCoverage 3.4492e-01 9.7164e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.03604111 6.6245e-01 lowCoverage 1.00000000 lowCoverage 0.311553 0.0063694 0.3091409 4 0.410680 0.0213018 0.3893785 1.2775e-06 1.0000e+00 lowCoverage 1.9355e-05 1.0000e+00 lowCoverage 8.3150e-06 1.0000e+00 lowCoverage 2.4456e-04 1.0000e+00 lowCoverage 0.2816092 1.4026e-04 lowCoverage 5.3946e-03 lowCoverage 0.309913 0.3145299 -0.00814094 5 0.371713 0.338453 0.0332606 4.0235e-01 3.9465e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.0556e-01 8.5928e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0947548 0.26197879 lowCoverage 1.000000 lowCoverage 0.0064103 0.3161512 -0.30002551 4 0.0276923 0.3722978 -0.3446054 1.0000e+00 9.4002e-10 lowCoverage 1.0000e+00 3.9167e-08 lowCoverage 1.00000000 3.8788e-05 lowCoverage 1.00000 2.1549e-03 lowCoverage -0.37636402 3.4387e-03 lowCoverage 1.0420e-01 lowCoverage chr20 60755450 60756450 55317 ENSG00000167046 0.898388 678 21 0.855998 628 20 0.897890 703 21 0.903541 726 19 0.892647 390 22 0.863870 977 21 0.8691786 460 20 0.8661757 592 20 0.858753 697 21 0.895749 708 21 0.8986248 700 22 0.9104806 338 21 0.9560733 713 20 0.896490 483 17 0.878735 662 20 0.8989512 341 19 0.823946 188 12 0.9179769 1101 20 0.8832051 687 21 0.886143 884 22 0.8881656 318 21 0.9097165 305 14 0.822675 495 19 0.799537 422 21 0.930871 290 18 0.9338308 806 21 0.9221609 393 20 0.902921 327 15 0.884191 683 20 0.9046821 817 21 0.914821 718 20 0.945073 730 20 0.9079740 502 20 0.8762372 423 20 0.760931 421 17 0.902788 148 13 0.850428 496 17 0.9277904 866 21 0.8413878 842 21 0.9047874 706 21 0.8728557 766 20 0.890229 845 21 0.904298 710 21 0.8920746 0.8775413 0.888758 0.913319 0.89259898 0.909704 0.8898487 0.8848480 0.882101 0.895497 0.924302 0.8793325 0.9430589 0.913150 0.928494 0.9526792 0.886747 0.8909723 0.92188524 0.910609 0.903677 0.8649299 0.891286 0.859238 0.915219 0.9137236 0.9181176 0.923956 0.900667 0.9148038 0.908054 0.927999 0.85373370 0.8359720 0.81855252 8.8010e-01 0.857976 0.9062280 0.9083858 0.9037781 0.892006 0.9100782 0.9157216 14 0.904077 0.912278 -0.00692991 21 0.853377 0.815694 0.03768261 8.8897e-01 0.10651611 insignificant 1.0000e+00 1.000000 insignificant 9.3640e-01 0.07666282 insignificant 1.0000e+00 1.00000 insignificant -0.0089128 0.5363790 insignificant 1 insignificant 0.904962 0.8774510 2.8327e-02 20 0.886705 0.8510599 3.5645e-02 1.7454e-06 2.0620e-02 weaklyHypermeth 2.1818e-05 1.0000e+00 weaklyHypermeth 7.1392e-01 1.0193e-03 inconclusive 1.0000e+00 2.0386e-01 insignificant 0.01661601 5.3823e-01 insignificant 1.0000e+00 insignificant 0.904111 0.899974 -0.00010466 21 0.851497 0.867305 -0.01580843 3.1249e-01 5.1145e-02 insignificant 1.0000e+00 9.6499e-01 insignificant 1.5831e-01 2.1875e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00492917 7.2422e-01 insignificant 1.00000000 insignificant 0.912698 0.8774510 0.0358866 20 0.904198 0.8510599 0.0531382 1.9558e-04 2.0915e-01 weaklyHypermeth 2.2225e-03 1.0000e+00 weaklyHypermeth 2.7312e-01 9.9686e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0255288 3.8434e-01 insignificant 1.0000e+00 insignificant 0.912554 0.8999742 0.00280772 21 0.864885 0.867305 -0.0024200 9.7578e-03 4.5024e-01 weaklyHypermeth 2.0329e-01 1.0000e+00 insignificant 7.5542e-02 4.0336e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0138419 0.44062252 insignificant 1.000000 insignificant 0.8774510 0.9009056 -0.03054302 20 0.8510599 0.9067281 -0.0556682 1.9921e-01 8.9350e-02 insignificant 1.0000e+00 6.3369e-01 insignificant 0.08811854 8.3389e-01 insignificant 1.00000 1.0000e+00 insignificant -0.01168684 6.8146e-01 insignificant 1.0000e+00 insignificant chr20 60757850 60758850 55318 SLCO4A1 ENSG00000101187 0.937793 181 6 0.895299 75 6 0.966809 88 6 0.963100 211 6 0.974359 61 6 0.907474 194 6 0.9912281 83 6 0.9570707 48 5 0.824308 74 6 0.841667 59 5 0.9089105 99 6 0.9095238 56 6 0.8820106 49 6 NA 0 0 0.905983 48 3 0.9595588 62 3 0.801920 61 6 0.9488694 241 6 0.9033088 65 6 0.911064 139 6 0.8002933 93 5 0.9539683 65 6 0.894444 133 6 0.944444 59 6 0.949024 93 6 0.9472991 74 3 0.9628571 80 6 0.859975 60 6 0.726068 57 4 0.8817340 60 6 0.860987 72 6 0.916779 202 6 0.8189033 75 6 0.9028563 89 6 0.750000 40 3 0.876984 78 6 0.923611 49 6 0.8106725 61 3 0.9337722 183 6 0.9143600 157 6 0.9217925 183 6 0.908219 251 6 0.924465 193 6 0.9272668 0.8947264 0.963530 0.962194 0.98731166 0.923143 0.9875203 0.9628241 0.857311 0.921649 0.893605 0.9301915 0.8721977 NA 0.914618 0.9400394 0.805356 0.9466758 0.92300637 0.937213 0.881934 0.9551301 0.912715 0.972509 0.945373 0.9203781 0.9675994 0.856826 0.782448 0.9133604 0.859015 0.939184 0.82697371 0.9318789 0.77897675 9.1335e-01 0.945017 0.8292187 0.9458746 0.9221559 0.933500 0.9291937 0.9219645 3 0.926610 0.909351 0.01475229 6 0.920413 0.901632 0.01878040 2.0212e-01 0.87000541 insignificant 1.0000e+00 1.000000 insignificant 3.9869e-01 0.91488509 insignificant 1.0000e+00 1.00000 insignificant 0.0237872 0.3316917 insignificant 1 insignificant 0.926610 0.8673469 5.8042e-02 6 0.920413 0.8568801 6.3533e-02 2.3621e-03 8.6710e-01 weaklyHypermeth 2.1280e-02 1.0000e+00 weaklyHypermeth 1.8052e-02 8.0226e-01 weaklyHypermeth 2.0057e-01 1.0000e+00 insignificant 0.06810539 5.2134e-02 insignificant 6.3912e-01 insignificant 0.926610 0.931748 -0.00227800 6 0.920413 0.921388 -0.00097486 7.7459e-01 6.3164e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.0258e-01 8.2032e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00524509 6.8193e-01 insignificant 1.00000000 insignificant 0.909351 0.8673469 0.0432304 6 0.901632 0.8568801 0.0447522 5.2439e-02 6.3309e-01 insignificant 3.7726e-01 1.0000e+00 insignificant 3.5998e-02 7.2909e-01 weaklyHypermeth 3.5048e-01 1.0000e+00 insignificant 0.0443182 2.1643e-01 insignificant 1.0000e+00 insignificant 0.909351 0.9317477 -0.01713073 6 0.901632 0.921388 -0.0197553 8.7519e-01 3.4653e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.1683e-01 7.0739e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0290323 0.19526205 insignificant 1.000000 insignificant 0.8673469 0.9317477 -0.06001905 6 0.8568801 0.9213876 -0.0645075 9.4732e-01 7.7058e-03 weaklyHypometh 1.0000e+00 7.6296e-02 weaklyHypometh 0.85430811 3.1204e-02 weaklyHypometh 1.00000 3.5459e-01 insignificant -0.07335048 4.0069e-02 weaklyHypometh 4.9594e-01 insignificant chr20 60787750 60788750 55319 SLCO4A1 ENSG00000101187 0.586244 246 7 0.549953 318 9 0.281705 162 9 0.494448 193 6 0.386864 185 9 0.529813 276 8 0.5553190 189 9 0.4587482 229 9 0.623897 135 9 0.426391 95 9 0.7492208 415 9 0.4915003 77 8 0.1689897 169 9 0.746923 55 6 0.324989 171 9 0.6284091 48 6 0.025000 34 4 0.6371972 239 5 0.2656792 262 8 0.482765 327 9 0.6584241 164 9 0.3572344 46 4 0.618571 165 8 0.398690 159 8 0.698946 126 5 0.4357906 393 9 0.5670561 172 9 0.587924 103 8 0.602672 248 9 0.0941681 474 9 0.232608 398 9 0.844301 303 9 0.1461966 383 9 0.1692872 263 8 0.206960 470 8 0.184394 152 7 0.246185 265 8 0.1286062 382 9 0.1064654 474 8 0.3480931 340 8 0.1375726 246 8 0.293600 271 8 0.334377 257 8 0.5680643 0.5566465 0.385095 0.461504 0.35630148 0.533226 0.5491227 0.4412831 0.655093 0.461901 0.739302 0.4934831 0.0550535 0.492298 0.306201 0.5909251 0.317911 0.5516308 0.22994939 0.485002 0.682551 0.3654559 0.556401 0.485520 0.655584 0.4211887 0.6124544 0.587987 0.634033 0.0986668 0.157806 0.836813 0.15682058 0.1799613 0.12152979 1.1815e-01 0.125147 0.1308143 0.1152640 0.3583342 0.123606 0.2017295 0.2275635 4 0.475904 0.446708 0.02881291 9 0.542342 0.570562 -0.02821970 4.8162e-01 0.97827397 insignificant 1.0000e+00 1.000000 insignificant 9.9391e-01 0.34797864 insignificant 1.0000e+00 1.00000 insignificant -0.0373293 0.6183170 insignificant 1 insignificant 0.475629 0.1400209 3.6903e-01 9 0.519738 0.1479679 3.7177e-01 1.7024e-17 1.0000e+00 hypermethylated 5.1587e-16 1.0000e+00 hypermethylated 7.4968e-11 1.0000e+00 hypermethylated 4.1649e-09 1.0000e+00 hypermethylated 0.29043134 1.3033e-06 hypermethylated 7.2403e-05 hypermethylated 0.475741 0.152393 0.29381727 9 0.538379 0.320330 0.21804872 1.8454e-11 9.9999e-01 hypermethylated 2.3068e-09 1.0000e+00 hypermethylated 6.1322e-08 9.9999e-01 hypermethylated 1.0220e-05 1.0000e+00 hypermethylated 0.22668119 6.0597e-03 weaklyHypermeth 0.23306548 insignificant 0.445093 0.1400941 0.3433460 9 0.441731 0.1627647 0.2789661 2.1317e-08 1.0000e+00 hypermethylated 4.3504e-07 1.0000e+00 hypermethylated 7.9921e-10 1.0000e+00 hypermethylated 5.0685e-08 1.0000e+00 hypermethylated 0.3277607 1.9478e-04 hypermethylated 7.2142e-03 hypermethylated 0.445093 0.1523929 0.27083634 9 0.441731 0.320330 0.1214010 1.7573e-04 9.9758e-01 hypermethylated 5.6688e-03 1.0000e+00 hypermethylated 1.6754e-05 9.9983e-01 hypermethylated 2.0942e-03 1.0000e+00 hypermethylated 0.2640105 0.00518554 weaklyHypermeth 0.370396 insignificant 0.1400941 0.1523929 -0.08877802 9 0.1627647 0.3203298 -0.1575651 9.9655e-01 1.4426e-03 weaklyHypometh 1.0000e+00 1.9235e-02 weaklyHypometh 0.99560501 7.2339e-04 weaklyHypometh 1.00000 1.7224e-02 weaklyHypometh -0.06375015 2.8937e-01 insignificant 1.0000e+00 insignificant chr20 60813250 60814250 55321 NTSR1 ENSG00000101188 0.764923 173 14 0.657078 207 11 0.834131 81 10 0.874887 131 11 0.893878 65 7 0.623552 144 11 0.8344017 108 3 0.8373855 175 14 0.875883 97 7 0.881111 146 11 0.8704140 480 14 0.8333333 22 0 0.8052041 167 11 0.748148 109 11 0.882099 117 11 0.7500000 25 0 NA 0 0 0.8188800 160 8 0.8433334 372 14 0.900551 130 11 0.8468864 132 14 0.4265873 43 4 0.814510 104 7 0.591575 43 3 0.909091 22 0 0.8126023 458 14 0.7452679 171 14 0.888889 10 0 0.825321 346 14 0.8780277 402 11 0.895242 430 11 0.902721 147 14 0.3024925 219 13 0.5011099 305 11 0.535714 336 8 NA 0 0 0.400160 221 12 0.7324344 430 14 0.5263310 195 11 0.6871620 169 13 0.6895292 152 11 0.460668 237 4 0.627877 136 11 0.7989885 0.7100262 0.937522 0.901370 0.85529954 0.834942 0.8558726 0.8817736 0.904223 0.905722 0.898685 0.8252688 0.8716820 0.866487 0.901224 0.7733510 NA 0.8791437 0.85974182 0.833463 0.935732 0.6507960 0.773947 0.733103 0.887746 0.9054482 0.7654655 0.928430 0.846273 0.9258508 0.939134 0.932412 0.37904320 0.5555859 0.78225806 NA 0.479782 0.7394965 0.7639636 0.8109694 0.801350 0.6140028 0.7245200 0 0.839807 0.833622 -0.00724017 14 0.791238 0.761263 0.02997506 7.9481e-01 0.42006518 insignificant 1.0000e+00 1.000000 insignificant 8.1380e-01 0.76669176 insignificant 1.0000e+00 1.00000 insignificant 0.0225992 0.6282763 insignificant 1 insignificant 0.840220 0.5314361 2.9094e-01 14 0.796392 0.5269126 2.6948e-01 4.9933e-29 1.0000e+00 hypermethylated 2.4967e-27 1.0000e+00 hypermethylated 1.6883e-11 1.0000e+00 hypermethylated 1.1255e-09 1.0000e+00 hypermethylated 0.32294376 9.4013e-03 weaklyHypermeth 1.5934e-01 insignificant 0.839752 0.785152 0.09271444 11 0.778958 0.571295 0.20766215 5.8273e-09 9.9059e-01 weaklyHypermeth 4.8561e-07 1.0000e+00 weaklyHypermeth 1.5930e-05 9.9908e-01 weaklyHypermeth 1.4482e-03 1.0000e+00 weaklyHypermeth 0.21901247 5.6203e-03 weaklyHypermeth 0.22481195 insignificant 0.834129 0.5314361 0.3092334 14 0.793920 0.5269126 0.2670079 1.5202e-20 1.0000e+00 hypermethylated 6.9098e-19 1.0000e+00 hypermethylated 1.6446e-08 1.0000e+00 hypermethylated 7.8313e-07 1.0000e+00 hypermethylated 0.3003445 9.0173e-03 weaklyHypermeth 1.5549e-01 insignificant 0.833406 0.7851519 0.10350734 11 0.747219 0.571295 0.1759238 3.6373e-07 9.9997e-01 weaklyHypermeth 2.4249e-05 1.0000e+00 weaklyHypermeth 5.6595e-04 9.9998e-01 weaklyHypermeth 3.7730e-02 1.0000e+00 weaklyHypermeth 0.1964132 0.00897872 weaklyHypermeth 0.458068 insignificant 0.5314361 0.7869222 -0.17911725 11 0.5269126 0.6070014 -0.0800888 9.9399e-01 7.4368e-05 weaklyHypometh 1.0000e+00 1.3521e-03 weaklyHypometh 0.99851054 2.4392e-02 weaklyHypometh 1.00000 3.0114e-01 insignificant -0.10393129 2.6373e-01 insignificant 1.0000e+00 insignificant chr20 60819650 60820650 55322 NTSR1 ENSG00000101188 0.864915 256 10 0.808897 145 10 0.782540 76 7 0.881360 268 10 0.818878 48 4 0.804231 365 14 0.7435897 33 1 0.7059224 180 10 0.525887 106 8 0.818705 173 13 0.8870683 224 14 0.6000000 50 6 0.7665236 367 13 0.739042 150 10 0.812303 171 12 0.5904762 15 1 0.746667 18 1 0.8078067 417 10 0.7335989 130 10 0.698841 243 13 0.5753676 85 8 0.6424274 192 10 0.712144 102 8 0.733894 107 8 0.912918 185 10 0.8126353 261 13 0.7889310 148 10 0.621212 46 5 0.647389 167 10 0.7039613 262 13 0.724855 226 10 0.930624 201 10 0.6023322 154 8 0.5341671 146 10 0.607530 213 6 0.700592 68 5 0.412719 88 8 0.6601929 230 10 0.7540857 125 10 0.7249588 346 10 0.7814410 205 10 0.783810 141 10 0.827137 223 10 0.8765311 0.8232623 0.872695 0.881867 0.85136251 0.865679 0.9691715 0.8921279 0.836178 0.916702 0.933683 0.9653179 0.8505165 0.888828 0.876796 0.8608109 0.905469 0.8915971 0.89876949 0.851905 0.888030 0.8366194 0.830414 0.889898 0.933797 0.9088432 0.8594631 0.922943 0.878506 0.8784649 0.845620 0.926234 0.61788849 0.6222768 0.42010136 7.3361e-01 0.697303 0.8657227 0.8390806 0.8882284 0.859606 0.7846133 0.8670012 1 0.860140 0.854188 0.00010335 10 0.717843 0.708343 0.00949996 4.5430e-01 0.54991257 insignificant 1.0000e+00 1.000000 insignificant 3.8263e-01 0.69048576 insignificant 1.0000e+00 1.00000 insignificant 0.0229996 0.5572693 insignificant 1 insignificant 0.861144 0.6028921 2.5401e-01 10 0.753735 0.4238300 3.2990e-01 3.2524e-21 1.0000e+00 hypermethylated 1.1616e-19 1.0000e+00 hypermethylated 4.9902e-05 9.9995e-01 hypermethylated 9.5966e-04 1.0000e+00 hypermethylated 0.17060707 6.7851e-03 weaklyHypermeth 1.2400e-01 insignificant 0.860859 0.845192 0.02590026 10 0.709195 0.712681 -0.00348604 9.2180e-02 8.7048e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.2965e-01 8.7226e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01742377 5.3329e-01 insignificant 1.00000000 insignificant 0.855336 0.6028921 0.2519018 10 0.723760 0.4238300 0.2999299 1.1201e-13 1.0000e+00 hypermethylated 3.1114e-12 1.0000e+00 hypermethylated 3.7878e-04 9.9994e-01 hypermethylated 6.5306e-03 1.0000e+00 hypermethylated 0.1476075 1.7093e-02 weaklyHypermeth 2.5512e-01 insignificant 0.854970 0.8451923 0.02828840 10 0.709221 0.712681 -0.0034597 3.1210e-01 7.2296e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.6742e-01 8.5472e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0404233 0.28223758 insignificant 1.000000 insignificant 0.6037946 0.8457088 -0.23012036 10 0.4431444 0.7152370 -0.2720926 1.0000e+00 1.7995e-03 weaklyHypometh 1.0000e+00 2.3071e-02 weaklyHypometh 0.99999990 1.8384e-01 insignificant 1.00000 1.0000e+00 insignificant -0.18803084 4.7594e-03 weaklyHypometh 1.2525e-01 insignificant chr20 60870050 60871050 55324 NTSR1 ENSG00000101188 0.766002 237 8 0.724090 227 7 0.648086 236 8 0.721614 236 10 0.738021 94 6 0.726752 380 8 0.7571353 175 7 0.8134559 245 8 0.668089 233 8 0.813326 180 8 0.8483328 213 8 0.7380341 129 8 0.6136374 312 8 0.755221 117 8 0.625344 193 8 0.7027211 51 5 0.721958 56 5 0.6296383 357 8 0.7114965 161 8 0.549160 282 8 0.8058103 110 8 0.3036342 220 8 0.680553 164 8 0.786483 138 8 0.821937 134 8 0.6332536 306 8 0.7242345 171 8 0.819024 74 6 0.599543 201 6 0.7657587 386 8 0.678905 339 8 0.810922 331 8 0.3711885 254 8 0.4259984 163 8 0.444444 113 8 0.333333 50 4 0.505944 195 8 0.5205490 284 8 0.3105210 304 10 0.4689463 238 8 0.4190220 151 8 0.430972 174 8 0.231419 258 10 0.6925400 0.7098356 0.664609 0.701578 0.78165709 0.775977 0.7662531 0.7935719 0.738301 0.829242 0.853737 0.7468701 0.6016406 0.739943 0.636931 0.7073578 0.638088 0.6093378 0.73110632 0.627642 0.795929 0.3067246 0.776900 0.806043 0.818267 0.7849980 0.7249352 0.779602 0.638809 0.6974607 0.714155 0.856126 0.34629521 0.4610047 0.56923390 4.9335e-01 0.495261 0.6648986 0.4304745 0.5022971 0.523548 0.4551657 0.4085433 7 0.748420 0.733489 -0.00560919 8 0.691418 0.677834 0.01358358 6.0338e-01 0.66214787 insignificant 1.0000e+00 1.000000 insignificant 9.1695e-01 0.49951497 insignificant 1.0000e+00 1.00000 insignificant 0.0111009 0.8107953 insignificant 1 insignificant 0.748723 0.4825307 2.3075e-01 8 0.727226 0.3675182 3.5971e-01 5.3146e-19 1.0000e+00 hypermethylated 1.7715e-17 1.0000e+00 hypermethylated 2.6412e-07 9.1808e-01 hypermethylated 9.4330e-06 1.0000e+00 hypermethylated 0.28002930 2.9475e-05 hypermethylated 1.2281e-03 hypermethylated 0.748723 0.431757 0.23887881 8 0.727226 0.363683 0.36354254 2.9273e-25 1.0000e+00 hypermethylated 1.4636e-22 1.0000e+00 hypermethylated 5.3378e-14 1.0000e+00 hypermethylated 5.3378e-11 1.0000e+00 hypermethylated 0.34142980 6.5293e-04 hypermethylated 0.05667679 hypermethylated 0.733956 0.4825307 0.2407658 8 0.712284 0.3675182 0.3447659 1.5249e-10 1.0000e+00 hypermethylated 3.5464e-09 1.0000e+00 hypermethylated 9.2692e-06 9.7679e-01 hypermethylated 2.6483e-04 1.0000e+00 hypermethylated 0.2689284 9.1731e-05 hypermethylated 3.9883e-03 hypermethylated 0.733956 0.4317574 0.25547542 8 0.712284 0.363683 0.3486006 7.9858e-13 1.0000e+00 hypermethylated 1.3310e-10 1.0000e+00 hypermethylated 4.9354e-09 1.0000e+00 hypermethylated 4.4222e-06 1.0000e+00 hypermethylated 0.3303289 0.00019219 hypermethylated 0.046564 hypermethylated 0.4825307 0.4317574 0.01093247 8 0.3675182 0.3636835 0.0038347 3.8991e-01 1.2181e-01 insignificant 1.0000e+00 8.4013e-01 insignificant 0.18288554 3.3686e-01 insignificant 1.00000 1.0000e+00 insignificant 0.06140050 2.8463e-01 insignificant 1.0000e+00 insignificant chr20 60920850 60921850 55327 COL9A3 ENSG00000092758 0.882718 181 10 0.822050 140 6 0.616317 262 7 0.881197 126 7 0.912781 124 7 0.776523 214 8 0.8491942 270 7 0.8714148 157 7 0.864310 186 7 0.828717 165 7 0.8248889 221 7 0.7970043 152 7 0.7270689 161 6 0.700000 18 1 0.822429 183 7 0.8065476 73 5 0.776933 133 5 0.6112039 108 6 0.8763799 171 7 0.781379 163 8 0.9341409 97 5 0.4166667 9 0 0.816926 108 8 0.827232 49 7 0.738095 20 1 0.7739160 191 7 0.8047619 83 7 0.863757 70 5 0.913688 167 7 0.7450816 202 8 0.833940 171 7 0.924281 217 8 0.2237620 280 7 0.1482008 205 7 0.516461 144 7 0.310699 88 7 0.246339 89 8 0.3515579 343 11 0.5525382 191 9 0.7042690 175 12 0.7928571 90 8 0.767797 90 7 0.392317 149 11 0.9298670 0.8053515 0.698901 0.890829 0.90417777 0.891205 0.8744550 0.8613586 0.822190 0.885415 0.812330 0.8208002 0.8033524 0.809227 0.823249 0.7527400 0.766003 0.6482081 0.84332096 0.820441 0.916583 0.6150901 0.898402 0.719756 0.829853 0.8268535 0.8160494 0.811413 0.890820 0.9012403 0.880981 0.894653 0.14418947 0.1286217 0.44944150 2.5818e-01 0.277120 0.2509147 0.5896767 0.5350249 0.743386 0.6814680 0.3641987 2 0.833801 0.866233 -0.03397378 7 0.755755 0.763951 -0.00819629 9.5107e-01 0.17885227 insignificant 1.0000e+00 1.000000 insignificant 9.9868e-01 0.20266958 insignificant 1.0000e+00 1.00000 insignificant 0.0020789 0.9627174 insignificant 1 insignificant 0.834061 0.2697998 5.7237e-01 7 0.809738 0.3080822 5.0166e-01 6.5926e-48 1.0000e+00 hypermethylated 7.3251e-46 1.0000e+00 hypermethylated 3.9049e-13 1.0000e+00 hypermethylated 4.3388e-11 1.0000e+00 hypermethylated 0.50194949 7.3270e-05 hypermethylated 2.8181e-03 hypermethylated 0.834113 0.617266 0.24938241 7 0.822422 0.612627 0.20979441 1.7491e-17 1.0000e+00 hypermethylated 3.4981e-15 1.0000e+00 hypermethylated 2.2136e-05 9.9997e-01 hypermethylated 1.7463e-03 1.0000e+00 hypermethylated 0.15949704 1.0047e-01 insignificant 1.00000000 insignificant 0.866860 0.2697998 0.6071496 7 0.818519 0.3080822 0.5104371 2.2078e-35 1.0000e+00 hypermethylated 2.0071e-33 1.0000e+00 hypermethylated 8.1096e-10 1.0000e+00 hypermethylated 5.0685e-08 1.0000e+00 hypermethylated 0.4998706 1.1163e-05 hypermethylated 5.0742e-04 hypermethylated 0.866860 0.6156069 0.29156451 7 0.818519 0.584958 0.2335615 4.5568e-14 9.9809e-01 hypermethylated 1.5189e-11 1.0000e+00 hypermethylated 1.8999e-05 1.0000e+00 hypermethylated 2.1110e-03 1.0000e+00 hypermethylated 0.1574181 0.11041240 insignificant 1.000000 insignificant 0.2697998 0.6156069 -0.34047422 8 0.3080822 0.5849578 -0.2768756 1.0000e+00 3.9218e-08 hypomethylated 1.0000e+00 1.4007e-06 hypomethylated 0.99999995 1.6172e-04 hypomethylated 1.00000 6.5754e-03 hypomethylated -0.34245244 6.4993e-03 weaklyHypometh 1.4129e-01 insignificant chr20 60933450 60934450 55329 COL9A3 ENSG00000092758 0.844223 569 12 0.852482 575 12 0.840932 573 12 0.837414 567 12 0.733940 289 12 0.900211 752 12 0.8593282 493 12 0.7758634 508 12 0.719852 570 12 0.893000 446 11 0.8904747 733 12 0.9182370 240 11 0.6389370 565 11 0.819314 386 11 0.866361 507 11 0.8404762 140 9 0.918702 551 5 0.7659089 702 12 0.7290669 801 12 0.861933 621 12 0.8506161 349 12 0.6723204 266 11 0.784069 400 12 0.734936 390 13 0.811700 345 12 0.8144600 663 12 0.7558348 459 11 0.741096 322 11 0.773605 705 12 0.7846428 797 12 0.719574 649 12 0.893998 624 12 0.3752808 602 12 0.3763282 337 11 0.449918 560 10 0.614890 152 8 0.343110 736 12 0.6005925 723 12 0.7433233 618 12 0.8412067 486 12 0.6161941 547 12 0.716243 496 9 0.752696 502 12 0.8788891 0.8489127 0.834019 0.836120 0.80405159 0.909180 0.8712352 0.8371392 0.820888 0.908005 0.884622 0.8886392 0.7029217 0.844641 0.851948 0.7734291 0.880479 0.8443067 0.76844864 0.872637 0.890133 0.7508084 0.860101 0.921627 0.877692 0.8788974 0.8183265 0.918177 0.854793 0.8785456 0.788307 0.893156 0.27196081 0.2632695 0.30635542 4.7967e-01 0.282408 0.4664707 0.8559281 0.8748550 0.684052 0.7570106 0.8494762 10 0.843298 0.850176 -0.01096382 12 0.751133 0.744323 0.00680963 5.4540e-01 0.36739098 insignificant 1.0000e+00 1.000000 insignificant 7.0839e-01 0.41753706 insignificant 1.0000e+00 1.00000 insignificant 0.0472617 0.0603371 insignificant 1 insignificant 0.843428 0.3286174 5.0754e-01 12 0.806839 0.4224858 3.8435e-01 5.4760e-62 9.9998e-01 hypermethylated 1.3690e-59 1.0000e+00 hypermethylated 4.5265e-14 9.9955e-01 hypermethylated 7.5442e-12 1.0000e+00 hypermethylated 0.36531290 3.4078e-04 hypermethylated 1.1359e-02 hypermethylated 0.843419 0.787387 0.05408443 12 0.797804 0.645924 0.15188034 2.1482e-05 9.7460e-01 weaklyHypermeth 7.6720e-04 1.0000e+00 weaklyHypermeth 8.8631e-04 9.6253e-01 weaklyHypermeth 3.6941e-02 1.0000e+00 weaklyHypermeth 0.09140018 6.2708e-02 insignificant 0.77742272 insignificant 0.850957 0.3286174 0.5075971 12 0.760233 0.4224858 0.3377471 1.0423e-44 9.9783e-01 hypermethylated 1.7372e-42 1.0000e+00 hypermethylated 2.2553e-12 9.7492e-01 hypermethylated 4.3571e-10 1.0000e+00 hypermethylated 0.3180512 7.1995e-04 hypermethylated 2.1817e-02 hypermethylated 0.850453 0.7874670 0.06822006 12 0.703566 0.669529 0.0340374 7.0555e-05 9.9663e-01 weaklyHypermeth 2.6356e-03 1.0000e+00 weaklyHypermeth 1.3395e-02 9.9675e-01 weaklyHypermeth 3.5250e-01 1.0000e+00 insignificant 0.0441385 0.31338739 insignificant 1.000000 insignificant 0.3282861 0.7876842 -0.43286080 12 0.4105605 0.6956101 -0.2850496 9.1913e-01 1.3514e-21 hypomethylated 1.0000e+00 1.6892e-19 hypomethylated 0.79984479 1.7291e-07 hypomethylated 1.00000 1.9212e-05 hypomethylated -0.27391272 1.6056e-03 weaklyHypometh 6.6899e-02 weaklyHypometh chr20 60934150 60935150 55330 COL9A3 ENSG00000092758 0.858521 536 12 0.766633 460 12 0.711710 613 12 0.843872 607 12 0.776643 317 12 0.903844 728 12 0.8819143 414 12 0.8155985 460 12 0.738411 473 12 0.892454 528 12 0.8861727 793 12 0.8333537 325 12 0.6388371 569 12 0.838813 461 12 0.845605 653 12 0.8983841 408 12 0.624523 521 2 0.8213958 1146 12 0.7576220 986 12 0.881239 637 12 0.9098227 303 12 0.7984317 288 12 0.886090 399 12 0.746135 302 10 0.890726 263 12 0.8431583 624 12 0.8322464 565 12 0.863688 274 12 0.868098 734 12 0.8460619 636 12 0.726350 571 12 0.896164 565 12 0.4423362 446 12 0.4581136 428 12 0.396648 513 11 0.730536 71 7 0.540120 709 12 0.6003991 778 12 0.8815195 652 12 0.8820657 479 12 0.7195746 589 12 0.812169 811 12 0.801790 524 12 0.8607229 0.8245755 0.745330 0.848553 0.84346852 0.907079 0.8831462 0.8119463 0.830968 0.920419 0.886001 0.9132180 0.6491862 0.840686 0.843380 0.9300287 0.780827 0.8358575 0.73289039 0.882196 0.863588 0.7876101 0.877619 0.879646 0.909687 0.8704753 0.8362017 0.896509 0.882447 0.8653584 0.745406 0.904890 0.35146376 0.3969582 0.34298303 7.1004e-01 0.412549 0.5177495 0.8849941 0.8879761 0.726386 0.8166741 0.8308767 12 0.833863 0.847212 -0.01708437 12 0.819329 0.797437 0.02189184 9.4588e-01 0.06739836 insignificant 1.0000e+00 1.000000 insignificant 9.9734e-01 0.03193310 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.0314704 0.2187468 insignificant 1 insignificant 0.833820 0.4149406 4.0976e-01 12 0.806424 0.4945814 3.1184e-01 9.2493e-48 9.4465e-01 hypermethylated 9.2493e-46 1.0000e+00 hypermethylated 3.1039e-09 8.8318e-01 hypermethylated 1.4781e-07 1.0000e+00 hypermethylated 0.28275171 1.5207e-03 weaklyHypermeth 3.3059e-02 weaklyHypermeth 0.834165 0.829460 0.00923914 12 0.837687 0.833614 0.00407331 7.4551e-01 4.4003e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.4730e-01 5.0115e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00864658 8.1330e-01 insignificant 1.00000000 insignificant 0.847129 0.4149406 0.4353699 12 0.782968 0.4945814 0.2883868 7.8024e-36 9.9779e-01 hypermethylated 8.6694e-34 1.0000e+00 hypermethylated 2.4538e-09 9.9654e-01 hypermethylated 1.2915e-07 1.0000e+00 hypermethylated 0.3142221 9.4190e-04 hypermethylated 2.6164e-02 hypermethylated 0.847743 0.8294599 0.03077972 12 0.856017 0.833614 0.0224032 7.0856e-02 8.7396e-01 insignificant 9.8410e-01 1.0000e+00 insignificant 4.5624e-02 9.6731e-01 weaklyHypermeth 8.6082e-01 1.0000e+00 insignificant 0.0228238 0.53044999 insignificant 1.000000 insignificant 0.4146259 0.8294041 -0.39430966 12 0.4797894 0.8197482 -0.3399588 9.9990e-01 2.5442e-19 hypomethylated 1.0000e+00 2.5442e-17 hypomethylated 0.98982228 1.1678e-05 hypomethylated 1.00000 7.7851e-04 hypomethylated -0.29139828 1.1120e-03 weaklyHypometh 5.2953e-02 weaklyHypometh chr20 61056150 61057150 55337 SLC17A9 ENSG00000101194 0.329790 226 7 0.282623 218 7 0.609698 212 7 0.256264 251 7 0.203588 161 7 0.502248 366 7 0.3939313 158 7 0.3950593 232 7 0.323452 196 7 0.393101 162 7 0.4065190 269 7 0.4834055 85 7 0.3059097 203 7 0.351746 135 7 0.283193 239 7 0.4892857 77 7 0.066667 7 0 0.4097520 354 7 0.3345908 278 7 0.267519 270 7 0.3206014 140 7 0.3308903 129 7 0.402523 171 7 0.408211 166 7 0.344353 103 7 0.2747842 264 7 0.2907664 264 7 0.446758 168 7 0.404842 214 7 0.1932754 335 7 0.299567 313 7 0.583317 230 7 0.1396494 261 7 0.3518519 172 7 0.146137 498 7 0.166667 40 5 0.144017 245 7 0.2553709 269 7 0.2212754 284 7 0.2344316 285 7 0.3268707 191 4 0.523447 203 7 0.309296 181 7 0.4031721 0.3666087 0.649712 0.359927 0.23148597 0.565019 0.4555483 0.4660224 0.364889 0.473495 0.494644 0.4996222 0.3800491 0.452731 0.366387 0.5198163 0.100890 0.4860626 0.42064098 0.319374 0.417613 0.4190563 0.449061 0.487189 0.416458 0.3668212 0.3688205 0.384244 0.483030 0.2663165 0.378428 0.643064 0.20474479 0.4243706 0.21772369 2.1289e-01 0.251717 0.3449933 0.2955474 0.3069776 0.395082 0.5888447 0.3988153 7 0.338619 0.302970 0.02233802 7 0.374885 0.334969 0.03991661 5.7780e-02 0.77219475 insignificant 1.0000e+00 1.000000 insignificant 3.1342e-01 0.55117764 insignificant 1.0000e+00 1.00000 insignificant -0.0039069 0.9214499 insignificant 1 insignificant 0.338619 0.1395819 1.5501e-01 7 0.374885 0.1824977 1.9239e-01 4.7419e-11 9.9454e-01 weaklyHypermeth 9.4839e-10 1.0000e+00 weaklyHypermeth 7.5152e-07 9.5971e-01 weaklyHypermeth 2.5051e-05 1.0000e+00 weaklyHypermeth 0.15380165 4.7686e-03 weaklyHypermeth 9.3502e-02 weaklyHypermeth 0.338619 0.236014 0.04617151 7 0.374885 0.326605 0.04828025 4.5892e-03 6.2439e-01 weaklyHypermeth 9.9766e-02 1.0000e+00 weaklyHypermeth 1.5311e-02 3.8536e-01 weaklyHypermeth 3.8699e-01 1.0000e+00 insignificant 0.03135304 6.2153e-01 insignificant 1.00000000 insignificant 0.303249 0.1393939 0.1453662 7 0.418098 0.1596855 0.2584122 4.1816e-07 9.9994e-01 weaklyHypermeth 6.8551e-06 1.0000e+00 weaklyHypermeth 5.1140e-06 9.9990e-01 weaklyHypermeth 1.7047e-04 1.0000e+00 weaklyHypermeth 0.1577085 4.8107e-03 weaklyHypermeth 9.4327e-02 weaklyHypermeth 0.302970 0.2360140 0.04113369 7 0.334969 0.326605 0.0083636 5.9538e-02 2.7360e-01 insignificant 8.5055e-01 1.0000e+00 insignificant 2.1223e-02 7.0711e-01 weaklyHypermeth 4.9192e-01 1.0000e+00 insignificant 0.0352599 0.58487056 insignificant 1.000000 insignificant 0.1395819 0.2360140 -0.07777573 7 0.1824977 0.3266052 -0.1441075 9.9975e-01 2.9413e-04 weaklyHypometh 1.0000e+00 4.4565e-03 weaklyHypometh 0.99840208 4.2936e-04 weaklyHypometh 1.00000 1.3417e-02 weaklyHypometh -0.12244861 9.8989e-02 insignificant 1.0000e+00 insignificant chr20 61334750 61335750 55341 YTHDF1 ENSG00000149658 0.823748 58 4 0.650000 24 4 0.713265 38 4 0.785714 40 4 0.573980 33 4 0.636054 47 7 0.4375000 16 0 0.6837702 155 7 0.964286 19 0 0.833333 44 7 0.8254392 236 7 0.6071429 26 0 0.8729839 173 7 0.821852 139 7 0.812500 19 0 NA 0 0 0.666667 8 0 0.8893275 97 7 0.6869609 219 7 0.612351 35 4 0.9330357 61 7 0.6214286 27 1 0.571429 8 0 0.200000 5 0 0.959184 47 7 0.9623997 132 7 0.8432540 60 7 0.333333 4 0 0.793915 170 7 0.8403630 154 7 0.898052 145 7 0.790000 30 4 0.3547619 39 4 0.7595238 104 7 0.000000 1 0 0.714286 11 0 0.767361 49 4 0.5017474 194 7 0.6190476 30 4 0.7555556 27 1 0.6000000 9 0 0.666667 6 0 0.785714 19 0 0.7062461 0.5714286 0.698980 0.761905 0.76615646 0.575964 0.4535346 0.7649290 0.940476 0.801587 0.917165 0.4523810 0.8716398 0.807253 0.865079 NA 0.952381 0.8791423 0.68942002 0.737812 0.872449 0.5357143 0.812547 0.270383 0.931973 0.9753788 0.9543651 NA 0.860771 0.9400259 0.851112 0.619048 0.56689342 0.8750000 NA 5.2381e-01 0.827381 0.6308245 0.6031746 0.9523810 0.738095 0.9523810 0.8333333 0 0.775596 0.855932 -0.08189866 7 0.728072 0.880684 -0.15261161 9.9996e-01 0.00018329 weaklyHypometh 1.0000e+00 0.091645 weaklyHypometh 9.9590e-01 0.07160441 insignificant 1.0000e+00 1.00000 insignificant 0.0025483 0.9743767 lowCoverage 1 lowCoverage 0.775596 0.6297229 1.3898e-01 7 0.728072 0.5599427 1.6813e-01 1.4245e-08 8.4847e-01 weaklyHypermeth 2.2610e-07 1.0000e+00 weaklyHypermeth 1.2170e-01 8.8457e-01 insignificant 9.1507e-01 1.0000e+00 insignificant 0.21513446 1.4381e-01 lowCoverage 1.0000e+00 lowCoverage 0.776130 0.722222 0.04001746 1 0.734311 0.574158 0.16015279 1.0581e-01 5.5360e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.3674e-01 2.2615e-02 lowCoverage 1.0000e+00 7.7981e-01 lowCoverage 0.04601764 3.5533e-01 lowCoverage 1.00000000 lowCoverage 0.856106 0.6281407 0.2237362 7 0.890627 0.5132808 0.3773461 1.7244e-07 9.9998e-01 hypermethylated 3.0794e-06 1.0000e+00 hypermethylated 1.0365e-01 9.9932e-01 insignificant 8.4268e-01 1.0000e+00 insignificant 0.2125861 1.7184e-01 lowCoverage 1.0000e+00 lowCoverage 0.853480 0.7142857 0.14479634 1 0.768752 0.516742 0.2520103 5.0597e-02 8.3126e-01 lowCoverage 7.4805e-01 1.0000e+00 lowCoverage 7.2354e-01 4.3783e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0434693 0.59872212 lowCoverage 1.000000 lowCoverage 0.6342711 0.7222222 -0.02172598 1 0.6103004 0.5741579 0.0361425 9.0052e-01 3.3068e-02 lowCoverage 1.0000e+00 2.6884e-01 lowCoverage 0.98364361 1.9617e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage -0.16911683 2.3694e-01 lowCoverage 1.0000e+00 lowCoverage chr20 61680150 61681150 55344 ENSG00000130589 0.917546 238 9 0.885785 185 9 0.750672 252 7 0.947455 244 8 0.829752 107 9 0.789754 375 11 0.8743714 150 10 0.7826679 238 10 0.831026 213 9 0.849977 203 9 0.8894386 310 10 0.8244949 92 7 0.8241129 212 8 0.921816 168 8 0.834115 199 8 0.7380401 99 6 0.773810 27 1 0.8291277 284 8 0.9514565 200 9 0.813317 209 11 0.8899287 81 6 0.9106594 151 6 0.983004 141 7 0.765932 153 6 0.935778 73 6 0.9179956 300 11 0.7953175 151 7 0.839730 109 6 0.824733 206 10 0.8893257 268 11 0.782832 257 12 0.947296 305 11 0.6019986 225 8 0.4676587 117 7 0.504505 122 6 0.445417 71 4 0.576186 213 11 0.5610565 265 13 0.9320735 253 10 0.8537149 225 9 0.8578086 177 9 0.823697 216 8 0.814614 223 10 0.9249757 0.8101456 0.824729 0.908424 0.93918203 0.885443 0.9470117 0.8913666 0.904440 0.921853 0.870018 0.7968584 0.8918003 0.900184 0.895240 0.8280886 0.946351 0.8565395 0.91065186 0.872581 0.938017 0.8766061 0.959880 0.930994 0.888667 0.9065817 0.8819236 0.905232 0.878860 0.9168332 0.910237 0.978849 0.52842207 0.2613359 0.22405978 3.7716e-01 0.340618 0.4154892 0.8831933 0.8888155 0.809294 0.7862402 0.8385537 4 0.876593 0.907931 -0.02509101 7 0.850735 0.830754 0.01998057 7.5413e-01 0.01005422 weaklyHypometh 1.0000e+00 0.837852 insignificant 9.3910e-01 0.02511414 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.0306077 0.2269133 insignificant 1 insignificant 0.876593 0.5153011 3.7399e-01 9 0.850735 0.6158635 2.3487e-01 1.4411e-34 9.9971e-01 hypermethylated 8.0058e-33 1.0000e+00 hypermethylated 3.6742e-11 1.0000e+00 hypermethylated 2.2963e-09 1.0000e+00 hypermethylated 0.31679996 4.1434e-06 hypermethylated 2.0717e-04 hypermethylated 0.886185 0.852699 0.03886408 9 0.891874 0.821232 0.07064129 2.9144e-04 6.5490e-01 weaklyHypermeth 8.5718e-03 1.0000e+00 weaklyHypermeth 4.7417e-02 8.7769e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant -0.01344476 6.0336e-01 insignificant 1.00000000 insignificant 0.907931 0.5153011 0.3949575 8 0.830754 0.6158635 0.2148909 7.6054e-25 9.9994e-01 hypermethylated 4.2252e-23 1.0000e+00 hypermethylated 4.1656e-10 1.0000e+00 hypermethylated 2.9754e-08 1.0000e+00 hypermethylated 0.3474076 3.5384e-07 hypermethylated 2.7219e-05 hypermethylated 0.913563 0.8526990 0.06298008 7 0.913691 0.821232 0.0924586 4.0039e-04 9.5507e-01 weaklyHypermeth 1.2133e-02 1.0000e+00 weaklyHypermeth 7.5904e-03 9.9010e-01 weaklyHypermeth 2.3001e-01 1.0000e+00 insignificant 0.0171629 0.56544775 insignificant 1.000000 insignificant 0.5170683 0.8526990 -0.35751601 9 0.6298425 0.8212324 -0.1913899 9.9700e-01 8.5923e-11 hypomethylated 1.0000e+00 4.0916e-09 hypomethylated 0.99989168 5.5045e-06 hypomethylated 1.00000 3.9318e-04 hypomethylated -0.33024472 3.8825e-06 hypomethylated 5.5464e-04 hypomethylated chr20 61751050 61752050 55346 GMEB2 ENSG00000101216 0.808417 87 5 0.659757 69 5 0.458333 31 5 0.690476 42 4 0.644180 57 9 0.822398 509 9 0.6502294 68 5 0.6810428 86 7 0.606481 50 6 0.691794 97 8 0.6822793 206 9 0.5018519 32 2 0.7079832 86 6 0.773810 55 4 0.683201 49 5 0.5518519 41 4 0.643519 44 4 0.8612132 86 6 0.6941823 127 9 0.812895 321 7 0.8143621 95 8 0.6469460 102 7 0.712073 67 5 0.663477 95 7 0.773810 33 4 0.7754630 75 5 0.7052469 57 5 0.785714 15 0 0.653571 44 4 0.7532051 57 5 0.680357 105 5 0.807137 312 5 0.6141877 75 5 0.5641433 81 7 0.662356 145 8 0.833333 4 0 0.541105 151 9 0.6675881 125 5 0.6875205 94 5 0.4953033 102 5 0.8465823 106 5 0.714773 42 4 0.687931 98 5 0.6909248 0.5361275 0.366236 0.678161 0.63680213 0.806556 0.6108990 0.6435976 0.616379 0.769636 0.761336 0.4647989 0.6347858 0.737179 0.745228 0.5505747 0.619253 0.8081051 0.70105277 0.798851 0.886951 0.6607597 0.701044 0.701874 0.801519 0.6788537 0.7636494 0.867100 0.714101 0.6617585 0.711220 0.839300 0.60779823 0.5295156 0.46315543 7.7862e-01 0.585646 0.6196204 0.7040202 0.6786482 0.698251 0.8489812 0.7666674 3 0.730285 0.741722 -0.01669504 5 0.710015 0.726079 -0.01606404 3.4597e-01 0.09100606 insignificant 1.0000e+00 1.000000 insignificant 6.7763e-01 0.00520942 weaklyHypometh 1.0000e+00 0.98332 insignificant -0.0496521 0.0987185 insignificant 1 insignificant 0.730285 0.5783133 1.4769e-01 5 0.710015 0.5993141 1.1070e-01 5.3824e-08 9.9053e-01 weaklyHypermeth 7.6892e-07 1.0000e+00 weaklyHypermeth 5.8814e-03 9.7252e-01 weaklyHypermeth 7.3449e-02 1.0000e+00 weaklyHypermeth 0.03417578 5.0074e-01 insignificant 1.0000e+00 insignificant 0.730285 0.712670 0.02766720 5 0.710015 0.682592 0.02742304 4.7419e-03 1.6602e-01 weaklyHypermeth 1.0089e-01 1.0000e+00 insignificant 3.9160e-01 4.2886e-02 inconclusive 1.0000e+00 1.0000e+00 insignificant -0.00512717 9.3571e-01 lowCoverage 1.00000000 lowCoverage 0.741722 0.5783133 0.1642330 5 0.726079 0.5993141 0.1267648 4.7046e-08 9.9704e-01 weaklyHypermeth 9.3295e-07 1.0000e+00 weaklyHypermeth 2.5246e-04 9.1140e-01 weaklyHypermeth 4.6752e-03 1.0000e+00 weaklyHypermeth 0.0838278 1.1360e-01 insignificant 1.0000e+00 insignificant 0.741722 0.7126697 0.04662522 5 0.726079 0.682592 0.0434871 4.8278e-02 5.4579e-01 weaklyHypermeth 7.3149e-01 1.0000e+00 insignificant 2.4593e-01 4.6143e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0445249 0.48454784 lowCoverage 1.000000 lowCoverage 0.5783133 0.7126697 -0.13471873 5 0.5993141 0.6825918 -0.0832777 8.4405e-01 2.3618e-04 weaklyHypometh 1.0000e+00 3.7488e-03 weaklyHypometh 0.93672260 2.7303e-03 weaklyHypometh 1.00000 4.7074e-02 weaklyHypometh -0.03930295 5.9260e-01 lowCoverage 1.0000e+00 lowCoverage chr20 61783850 61784850 55347 RTEL1 ENSG00000026036 0.975671 107 5 0.782228 153 6 0.641801 213 7 0.907475 70 2 0.988553 96 5 0.906097 164 7 0.9048160 160 5 0.8487890 143 7 0.919172 169 5 0.955952 121 6 0.8841063 143 7 0.7978855 120 5 0.8122259 174 7 NA 0 0 0.869029 123 5 0.8941218 104 5 0.802293 116 4 0.7566288 92 2 0.9526709 137 5 0.872319 171 7 0.8130952 82 6 0.8600000 52 4 0.906584 114 6 0.923129 67 5 0.787546 21 1 0.9134854 213 7 0.7115646 85 6 0.913910 80 5 0.657834 147 5 0.9313025 193 7 0.948593 176 7 0.903904 208 7 0.2070979 243 7 0.2936508 113 5 0.400000 120 3 0.090909 50 5 0.292208 57 5 0.3514763 238 7 0.7210784 108 5 0.7740195 114 5 0.9188034 59 2 0.984000 110 5 0.786236 100 5 0.9268014 0.7703159 0.662300 0.863582 0.98631957 0.854523 0.8775514 0.8628224 0.880141 0.942276 0.897792 0.7815198 0.7433243 NA 0.813285 0.9193841 0.771223 0.6166543 0.93440368 0.898596 0.750339 0.8237398 0.904642 0.897096 0.879925 0.8814671 0.7119628 0.982478 0.801044 0.9023553 0.924279 0.932959 0.06826200 0.0090334 0.08370845 1.1456e-01 0.137472 0.1121800 0.8876495 0.7863034 0.904315 0.9798374 0.7543984 2 0.848579 0.892136 -0.04480677 5 0.897422 0.923110 -0.02568856 9.9938e-01 0.05801248 insignificant 1.0000e+00 1.000000 insignificant 8.1149e-01 0.15331057 insignificant 1.0000e+00 1.00000 insignificant 0.0110264 0.7451467 insignificant 1 insignificant 0.848402 0.1132765 7.2933e-01 5 0.853460 0.2893366 5.6412e-01 2.3570e-58 9.9649e-01 hypermethylated 3.3671e-56 1.0000e+00 hypermethylated 5.0672e-12 9.9797e-01 hypermethylated 4.6066e-10 1.0000e+00 hypermethylated 0.59438169 5.7514e-06 hypermethylated 2.7388e-04 hypermethylated 0.848303 0.857143 -0.01030803 5 0.910465 0.727671 0.18279418 9.9573e-01 8.9071e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8776e-01 8.4622e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03011118 5.9247e-01 lowCoverage 1.00000000 lowCoverage 0.891684 0.1132765 0.7493370 5 0.890158 0.2893366 0.6008210 2.0331e-48 9.9946e-01 hypermethylated 5.0828e-46 1.0000e+00 hypermethylated 1.3448e-10 9.7113e-01 hypermethylated 1.3448e-08 1.0000e+00 hypermethylated 0.5833553 1.8249e-06 hypermethylated 9.6049e-05 hypermethylated 0.892050 0.8600823 0.03045866 5 0.917777 0.909589 0.0081880 4.2785e-01 9.7035e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.8897e-01 7.6123e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0190848 0.74435682 lowCoverage 1.000000 lowCoverage 0.0946451 0.8595041 -0.73302030 5 0.1801520 0.8794517 -0.6992997 1.0000e+00 1.2102e-24 hypomethylated 1.0000e+00 2.4205e-22 hypomethylated 0.99999990 3.5881e-08 hypomethylated 1.00000 5.9802e-06 hypomethylated -0.56427051 1.7858e-05 lowCoverage 1.7858e-03 lowCoverage chr20 61788050 61789050 55348 RTEL1 ENSG00000026036 0.844206 967 25 0.785673 689 27 0.856472 619 26 0.943578 985 20 0.821009 427 25 0.932099 938 27 0.7785507 539 25 0.9135144 602 30 0.912756 563 24 0.922653 697 24 0.8812407 786 31 0.8770741 388 24 0.8576031 861 26 0.894601 264 13 0.854339 595 24 0.6371473 218 15 0.896161 193 17 0.8255498 1240 23 0.9278442 643 29 0.913350 843 28 0.8478192 346 27 0.6637626 276 15 0.855700 557 27 0.857469 275 17 0.717055 398 23 0.8599355 701 29 0.6940555 383 23 0.783565 309 20 0.875000 712 29 0.8958369 781 28 0.891895 753 29 0.886169 973 28 0.2911123 806 31 0.4425025 607 30 0.412625 724 17 0.521936 425 20 0.335915 445 28 0.7259552 815 31 0.7657105 917 26 0.6942828 917 28 0.8641365 856 21 0.802671 852 21 0.864701 1005 22 0.9245315 0.8716800 0.863588 0.937380 0.91721502 0.934930 0.9222655 0.9141440 0.908002 0.936149 0.913454 0.8790085 0.9135267 0.906334 0.933753 0.7558335 0.927612 0.8170205 0.92415816 0.946204 0.928925 0.7339193 0.917815 0.947267 0.867512 0.9191189 0.8686018 0.915447 0.925854 0.9339003 0.957074 0.939873 0.47406368 0.5986594 0.54552491 5.7644e-01 0.546227 0.7818281 0.8464479 0.8186041 0.863680 0.7858720 0.8958889 14 0.907747 0.911737 -0.01021250 25 0.748340 0.745486 0.00285472 6.5475e-01 0.67454271 insignificant 1.0000e+00 1.000000 insignificant 6.1064e-01 0.83097660 insignificant 1.0000e+00 1.00000 insignificant 0.0447491 0.1350478 insignificant 1 insignificant 0.907802 0.5041885 3.4982e-01 28 0.754317 0.3975267 3.5679e-01 3.2823e-105 1.0000e+00 hypermethylated 1.6411e-102 1.0000e+00 hypermethylated 4.7448e-32 1.0000e+00 hypermethylated 2.3724e-29 1.0000e+00 hypermethylated 0.40876362 9.8375e-04 hypermethylated 2.5888e-02 hypermethylated 0.908777 0.860347 0.06472896 22 0.822640 0.736641 0.08599923 1.2650e-15 9.9998e-01 weaklyHypermeth 2.1084e-13 1.0000e+00 weaklyHypermeth 8.6035e-06 9.9970e-01 weaklyHypermeth 9.1207e-04 1.0000e+00 weaklyHypermeth 0.06547079 1.1671e-01 insignificant 1.00000000 insignificant 0.911924 0.5043182 0.3608489 25 0.748672 0.4118713 0.3368008 3.8103e-68 1.0000e+00 hypermethylated 1.9051e-65 1.0000e+00 hypermethylated 1.8880e-24 1.0000e+00 hypermethylated 9.4399e-22 1.0000e+00 hypermethylated 0.3640145 1.3559e-03 weaklyHypermeth 3.5681e-02 weaklyHypermeth 0.915083 0.8603168 0.08371055 19 0.809611 0.729523 0.0800878 9.4882e-12 9.9051e-01 weaklyHypermeth 1.2800e-09 1.0000e+00 weaklyHypermeth 4.1515e-04 9.8932e-01 weaklyHypermeth 3.1934e-02 1.0000e+00 weaklyHypermeth 0.0207217 0.61785068 insignificant 1.000000 insignificant 0.5064491 0.8605061 -0.29564682 22 0.4465659 0.7497872 -0.3032214 1.0000e+00 1.1821e-23 hypomethylated 1.0000e+00 1.9702e-21 hypomethylated 1.00000000 1.8303e-12 hypomethylated 1.00000 6.1010e-10 hypomethylated -0.34329283 1.7041e-03 weaklyHypometh 6.8164e-02 weaklyHypometh chr20 61852850 61853850 55349 SLC2A4RG ENSG00000125520 0.806257 388 10 0.555637 220 9 0.691576 242 11 0.819812 299 11 0.681409 160 9 0.832334 327 11 0.6816461 141 10 0.8951378 227 11 0.745447 144 11 0.682593 159 10 0.7749386 447 15 0.6395105 92 8 0.8276185 183 10 0.656281 141 7 0.781520 149 8 0.6166667 24 2 0.873333 39 5 0.6879165 717 11 0.6117734 262 11 0.711721 224 11 0.7947235 182 11 0.6323432 196 10 0.621264 340 10 0.685399 86 10 0.657680 467 11 0.8371403 378 15 0.4970323 216 13 0.393598 55 4 0.812255 300 11 0.6933369 413 15 0.764996 339 15 0.757135 367 11 0.7247586 163 9 0.6724026 338 11 0.755173 278 11 0.880435 121 8 0.603888 155 13 0.7334904 419 15 0.7168455 273 10 0.8601141 323 11 0.8109365 280 9 0.789776 443 12 0.769738 398 11 0.7686417 0.5416726 0.582335 0.860768 0.73557888 0.807739 0.6780091 0.8438510 0.721043 0.753117 0.730905 0.6384037 0.8531461 0.752753 0.727814 0.6877714 0.726541 0.7750422 0.73958151 0.825990 0.789005 0.6546017 0.587574 0.706290 0.771366 0.7720753 0.6709224 0.628065 0.835746 0.7494749 0.824275 0.660951 0.70428456 0.5759778 0.73937689 7.1396e-01 0.712835 0.7686475 0.8257166 0.8392066 0.858530 0.8190094 0.8338986 6 0.726975 0.683738 0.02372474 11 0.669191 0.659812 0.00937890 3.9804e-01 0.97757096 insignificant 1.0000e+00 1.000000 insignificant 4.1274e-01 0.93385671 insignificant 1.0000e+00 1.00000 insignificant 0.0497478 0.2669946 insignificant 1 insignificant 0.727729 0.6750339 6.6830e-02 11 0.752650 0.5642747 1.8838e-01 2.0194e-02 1.2411e-01 weaklyHypermeth 1.4633e-01 1.0000e+00 insignificant 5.6672e-01 8.7430e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00029852 9.9464e-01 insignificant 1.0000e+00 insignificant 0.727134 0.860221 -0.08151923 11 0.702650 0.716334 -0.01368399 9.1460e-01 2.4873e-03 weaklyHypometh 1.0000e+00 1.3091e-01 insignificant 9.9974e-01 2.1846e-04 weaklyHypometh 1.0000e+00 2.7308e-02 weaklyHypometh -0.06082549 7.9499e-02 insignificant 0.86688670 insignificant 0.684053 0.6757308 0.0546438 11 0.676634 0.5764295 0.1002049 4.7036e-02 2.6234e-01 weaklyHypermeth 3.4568e-01 1.0000e+00 insignificant 5.7863e-01 1.4502e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0494493 3.7096e-01 insignificant 1.0000e+00 insignificant 0.683643 0.8602213 -0.10562540 11 0.642803 0.716334 -0.0735318 9.9706e-01 2.6312e-03 weaklyHypometh 1.0000e+00 2.0240e-01 insignificant 9.9981e-01 5.1549e-04 weaklyHypometh 1.0000e+00 1.1789e-01 insignificant -0.1105733 0.02583166 weaklyHypometh 0.587083 insignificant 0.6757308 0.8601399 -0.13613488 11 0.5764295 0.7014047 -0.1249753 9.6275e-01 1.2927e-03 weaklyHypometh 1.0000e+00 1.7955e-02 weaklyHypometh 0.92230680 2.5700e-01 insignificant 1.00000 1.0000e+00 insignificant -0.06112401 2.0549e-01 insignificant 1.0000e+00 insignificant chr20 61886850 61887850 55353 SLC2A4RG ENSG00000125520 0.663293 478 10 0.711518 287 10 0.728169 277 9 0.524777 440 10 0.741629 199 9 0.782248 589 11 0.7680773 255 10 0.6181083 238 9 0.728378 163 8 0.769165 189 9 0.7724502 459 11 0.7120617 135 9 0.7470185 246 9 0.728395 76 5 0.745367 216 9 0.5953113 134 7 0.765364 183 7 0.7588749 465 11 0.7746553 288 11 0.682311 402 10 0.5832766 106 7 0.7582991 150 10 0.719550 293 11 0.659248 175 7 0.726894 129 8 0.5671132 316 11 0.5707731 161 9 0.614734 106 7 0.687542 213 10 0.6129155 325 11 0.726012 264 11 0.775333 588 10 0.5757574 253 9 0.5962693 210 10 0.634271 761 11 0.571759 72 5 0.681360 204 9 0.6249652 338 10 0.7190491 370 10 0.7249917 455 10 0.6955880 337 10 0.791403 357 6 0.762907 377 10 0.7301988 0.6412485 0.717296 0.702732 0.76954073 0.729685 0.7433029 0.7432066 0.725802 0.720911 0.757626 0.6474696 0.7177980 0.746073 0.791514 0.6987780 0.773942 0.7057194 0.74724491 0.777215 0.748712 0.7320318 0.695613 0.738830 0.742826 0.7206684 0.6851820 0.745933 0.708066 0.7051077 0.746140 0.749657 0.58921359 0.6245686 0.68307707 6.9056e-01 0.695624 0.5748541 0.7558154 0.7528413 0.681459 0.7441490 0.7439736 7 0.743137 0.736023 0.00343960 10 0.640406 0.595009 0.04539741 4.4714e-02 0.60588766 weaklyHypermeth 1.0000e+00 1.000000 insignificant 5.2598e-02 0.50052280 insignificant 1.0000e+00 1.00000 insignificant 0.0490509 0.0784218 insignificant 1 insignificant 0.744722 0.7230686 7.5895e-02 11 0.736918 0.6480382 8.8880e-02 3.2068e-10 8.2058e-01 weaklyHypermeth 5.9385e-09 1.0000e+00 weaklyHypermeth 8.4950e-07 9.9996e-01 weaklyHypermeth 2.7403e-05 1.0000e+00 weaklyHypermeth 0.10179494 5.4023e-04 weaklyHypermeth 1.5889e-02 weaklyHypermeth 0.744219 0.814873 -0.00660390 10 0.723546 0.725756 -0.00221047 2.6577e-01 1.1795e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.6104e-01 2.3785e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02292936 3.3655e-01 insignificant 1.00000000 insignificant 0.741151 0.7230686 0.0754088 10 0.735618 0.6480382 0.0875801 4.3664e-06 9.9539e-01 weaklyHypermeth 6.1078e-05 1.0000e+00 weaklyHypermeth 1.0572e-05 9.9999e-01 weaklyHypermeth 2.9366e-04 1.0000e+00 weaklyHypermeth 0.0527440 7.4078e-02 insignificant 8.2309e-01 insignificant 0.739687 0.8148734 -0.00923532 10 0.686549 0.725756 -0.0392075 3.4702e-01 5.3244e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 6.6258e-01 1.4439e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0719803 0.02058572 weaklyHypometh 0.527839 insignificant 0.7230686 0.8151083 -0.07156733 10 0.6480382 0.7213484 -0.0733102 9.9132e-01 2.1718e-05 weaklyHypometh 1.0000e+00 4.3436e-04 weaklyHypometh 0.99998724 1.2803e-04 weaklyHypometh 1.00000 5.8194e-03 weaklyHypometh -0.12472429 5.9632e-04 weaklyHypometh 3.9050e-02 weaklyHypometh chr20 61920550 61921550 55354 ZBTB46 ENSG00000130584 0.797600 458 5 0.954980 454 7 0.841222 222 6 0.925972 441 7 0.806117 225 7 0.970354 468 7 0.8802063 247 7 0.9628355 196 5 0.788732 154 5 0.826015 115 5 0.7344389 441 7 0.7424917 93 5 0.8059757 144 5 0.935550 156 5 0.947023 224 5 0.8520594 94 5 1.000000 4 0 0.8013050 336 5 0.6785868 372 5 0.806416 329 5 0.7703223 67 5 0.8371362 83 5 0.835458 154 5 0.730160 138 6 0.937362 167 7 0.8149272 377 7 0.6399398 142 5 0.780000 77 4 0.748487 215 5 0.8116179 187 5 0.856233 374 7 0.889704 357 5 0.7059719 316 7 0.7870056 157 5 0.754219 1216 7 0.570000 80 3 0.721331 163 6 0.9081681 322 5 0.8195385 611 7 0.8312527 474 5 0.9157700 684 6 0.891541 286 5 0.954996 529 7 0.9496216 0.9282980 0.794329 0.924818 0.90589749 0.955475 0.8996633 0.9465506 0.927435 0.971097 0.924556 0.9431487 0.9586609 0.911865 0.919856 0.9309917 0.973128 0.8971479 0.95024726 0.930073 0.906953 0.9230769 0.887897 0.929414 0.979464 0.9135064 0.8797083 0.969727 0.946680 0.8965217 0.928964 0.949732 0.78728241 0.7700645 0.78818519 6.3995e-01 0.749854 0.9154356 0.9148446 0.9142897 0.944951 0.8630016 0.9339630 5 0.925382 0.922583 -0.00395270 5 0.708954 0.719178 -0.01022478 8.3861e-01 0.18076862 insignificant 1.0000e+00 1.000000 insignificant 8.1280e-01 0.12989637 insignificant 1.0000e+00 1.00000 insignificant 0.0486150 0.1199110 insignificant 1 insignificant 0.926536 0.8589175 9.2883e-02 5 0.813431 0.7204125 9.3018e-02 3.8537e-07 6.7246e-01 weaklyHypermeth 5.0706e-06 1.0000e+00 weaklyHypermeth 1.9937e-03 9.9546e-01 weaklyHypermeth 2.6583e-02 1.0000e+00 weaklyHypermeth 0.11177805 5.7543e-02 insignificant 6.9329e-01 insignificant 0.926536 0.937693 0.00522598 5 0.813431 0.815575 -0.00214452 8.1761e-01 4.4118e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.8486e-01 6.2884e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02972557 3.8245e-01 insignificant 1.00000000 insignificant 0.927924 0.8589175 0.1067972 5 0.845434 0.7204125 0.1250219 3.0055e-07 8.2037e-01 weaklyHypermeth 5.0941e-06 1.0000e+00 weaklyHypermeth 2.6910e-05 8.8838e-01 weaklyHypermeth 6.2583e-04 1.0000e+00 weaklyHypermeth 0.0631630 2.4780e-01 insignificant 1.0000e+00 insignificant 0.927924 0.9376935 0.01056913 5 0.845434 0.815575 0.0298593 9.3613e-02 7.0309e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.2816e-01 8.3069e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0783406 0.04342490 weaklyHypometh 0.791062 insignificant 0.8589175 0.9376935 -0.07177717 5 0.7204125 0.8155751 -0.0951626 8.8517e-01 1.7538e-02 weaklyHypometh 1.0000e+00 1.6239e-01 insignificant 0.99918000 1.5775e-02 weaklyHypometh 1.00000 2.1181e-01 insignificant -0.14150362 2.6738e-02 weaklyHypometh 3.7136e-01 insignificant chr20 61936550 61937550 55356 ZBTB46 ENSG00000130584 0.364486 119 6 0.338248 119 9 0.438203 111 9 0.452115 84 9 0.450595 80 6 0.520101 134 9 0.3879256 166 9 0.5113757 122 8 0.400779 123 9 0.612474 134 9 0.5786241 233 9 0.3955924 80 5 0.4316516 142 9 0.312821 44 5 0.517222 133 9 0.8205931 59 5 0.814286 65 5 0.4325036 90 7 0.3025259 233 9 0.524288 135 9 0.4324204 161 9 0.5558333 139 9 0.589255 174 9 0.522198 105 8 0.482651 343 5 0.4366447 195 9 0.4880397 127 9 0.258113 49 4 0.463668 109 7 0.4310967 211 9 0.540625 177 9 0.483338 242 9 0.0320459 175 9 0.0570076 163 9 0.042636 278 6 0.106981 181 9 0.099084 133 10 0.1140585 297 9 0.5482283 89 6 0.5732000 174 9 0.6236332 74 7 0.563504 193 9 0.522507 91 9 0.4933556 0.4848691 0.498986 0.514831 0.45826518 0.704312 0.5080619 0.6041803 0.518978 0.633872 0.626134 0.4539610 0.5546740 0.581858 0.627105 0.6729053 0.631290 0.5070747 0.36574605 0.622677 0.491938 0.6419466 0.619650 0.660746 0.615205 0.6027348 0.5515958 0.328105 0.583564 0.5359992 0.636230 0.541718 0.04261956 0.0465389 0.07584134 1.0012e-01 0.120644 0.1143342 0.6690421 0.6951584 0.700569 0.6339093 0.5991045 4 0.549875 0.471949 -0.00581255 9 0.462538 0.483606 -0.02106829 7.3095e-01 0.66950804 insignificant 1.0000e+00 1.000000 insignificant 9.5108e-01 0.52709061 insignificant 1.0000e+00 1.00000 insignificant 0.0066635 0.8690790 insignificant 1 insignificant 0.549730 0.0774246 4.6466e-01 9 0.442125 0.0667099 3.7542e-01 6.7949e-38 1.0000e+00 hypermethylated 4.5299e-36 1.0000e+00 hypermethylated 2.9639e-16 1.0000e+00 hypermethylated 7.4098e-14 1.0000e+00 hypermethylated 0.40501836 2.8170e-11 hypermethylated 4.6950e-09 hypermethylated 0.551378 0.663446 -0.10193162 9 0.478904 0.565700 -0.08679591 8.0185e-01 1.4120e-04 weaklyHypometh 1.0000e+00 1.4120e-02 weaklyHypometh 8.9881e-01 1.5279e-04 weaklyHypometh 1.0000e+00 2.5465e-02 weaklyHypometh -0.08589415 2.5419e-02 weaklyHypometh 0.48882127 insignificant 0.471689 0.0774246 0.4332059 9 0.431967 0.0667099 0.3652568 1.1577e-31 1.0000e+00 hypermethylated 8.9055e-30 1.0000e+00 hypermethylated 8.8711e-15 1.0000e+00 hypermethylated 2.2178e-12 1.0000e+00 hypermethylated 0.3983549 2.4907e-10 hypermethylated 7.6668e-08 hypermethylated 0.472154 0.6634461 -0.09769856 9 0.479963 0.565700 -0.0857371 7.5911e-01 2.4436e-04 weaklyHypometh 1.0000e+00 4.4225e-02 weaklyHypometh 7.5861e-01 5.8360e-03 weaklyHypometh 1.0000e+00 7.3066e-01 insignificant -0.0925576 0.00702102 weaklyHypometh 0.451135 insignificant 0.0778051 0.6634461 -0.57775522 9 0.0741221 0.5657002 -0.4915780 9.9987e-01 3.7264e-27 hypomethylated 1.0000e+00 9.3161e-25 hypomethylated 0.99992917 1.0132e-09 hypomethylated 1.00000 2.0264e-07 hypomethylated -0.49091251 8.5469e-09 hypomethylated 8.5469e-06 hypomethylated chr20 62043250 62044250 55363 MIR1914 ENSG00000223010 0.123009 1362 28 0.051380 975 26 0.196573 1420 35 0.618279 854 25 0.182660 818 37 0.032465 1680 33 0.0300820 1502 37 0.3082159 722 33 0.148250 1098 37 0.124943 1270 37 0.1583416 1110 37 0.1406589 1060 37 0.1349052 1139 36 0.475793 271 12 0.349433 947 37 0.1705229 687 29 0.192787 1860 25 0.2048377 1198 22 0.0373612 756 16 0.193200 1394 33 0.1097782 713 33 0.0844319 706 32 0.061321 1279 35 0.070885 728 36 0.141167 399 23 0.1393363 1069 35 0.0419670 782 31 0.064172 509 29 0.055511 965 29 0.1152953 1255 36 0.040055 1017 34 0.012064 1661 33 0.2836561 729 33 0.5657091 1027 32 0.601385 655 23 0.369310 242 15 0.392630 339 25 0.3526598 760 28 0.2903739 1086 30 0.2274723 1638 34 0.4598678 1072 20 0.338376 1536 24 0.308207 1044 25 0.1661802 0.0506234 0.168341 0.520691 0.21339172 0.043898 0.0335152 0.3327546 0.146156 0.131558 0.154610 0.0860380 0.1753235 0.409314 0.459610 0.1698111 0.272953 0.2495797 0.01485590 0.212510 0.057342 0.0736893 0.062698 0.129948 0.137076 0.2313432 0.0375683 0.069965 0.072079 0.1945558 0.033011 0.016381 0.37197694 0.6254511 0.70477067 3.4162e-01 0.555373 0.3385316 0.3078257 0.2427150 0.541799 0.3985621 0.2977431 17 0.182344 0.076694 0.10860697 36 0.163927 0.078750 0.08517694 5.1433e-19 1.00000000 weaklyHypermeth 5.1433e-16 1.000000 weaklyHypermeth 6.1722e-20 1.00000000 weaklyHypermeth 6.1722e-17 1.00000 weaklyHypermeth 0.1156862 0.0030844 weaklyHypermeth 1 insignificant 0.182406 0.4749467 -2.8998e-01 30 0.167990 0.3982786 -2.3029e-01 1.0000e+00 1.2693e-51 hypomethylated 1.0000e+00 1.2693e-48 hypomethylated 1.0000e+00 1.8447e-22 hypomethylated 1.0000e+00 1.8447e-19 hypomethylated -0.23387353 3.7579e-03 weaklyHypometh 7.6693e-02 weaklyHypometh 0.182402 0.345828 -0.15895972 25 0.167925 0.314469 -0.14654402 1.0000e+00 2.8409e-23 weaklyHypometh 1.0000e+00 2.8409e-20 weaklyHypometh 1.0000e+00 9.0428e-18 weaklyHypometh 1.0000e+00 9.0428e-15 weaklyHypometh -0.13117457 2.5191e-02 weaklyHypometh 0.48882127 insignificant 0.076576 0.4749467 -0.4004447 30 0.069851 0.3982786 -0.3284280 1.0000e+00 2.6213e-99 hypomethylated 1.0000e+00 2.6213e-96 hypomethylated 1.0000e+00 6.7066e-39 hypomethylated 1.0000e+00 6.7066e-36 hypomethylated -0.3495597 8.1749e-04 hypomethylated 2.3919e-02 hypomethylated 0.076631 0.3458281 -0.27587449 25 0.074573 0.314469 -0.2398960 1.0000e+00 3.2879e-78 hypomethylated 1.0000e+00 3.2879e-75 hypomethylated 1.0000e+00 1.6805e-39 hypomethylated 1.0000e+00 1.6805e-36 hypomethylated -0.2468608 0.00193123 weaklyHypometh 0.193123 insignificant 0.4749467 0.3458883 0.11394237 25 0.3982786 0.3049550 0.0933236 7.9673e-10 9.8966e-01 weaklyHypermeth 7.9673e-07 1.0000e+00 weaklyHypermeth 0.00187080 9.9863e-01 weaklyHypermeth 0.46770 1.0000e+00 insignificant 0.10269896 1.4614e-01 insignificant 1.0000e+00 insignificant chr20 62050650 62051650 55364 MIR647 ENSG00000207554 0.092184 403 10 0.149003 409 10 0.095298 398 9 0.064908 473 9 0.059160 286 10 0.190114 468 10 0.0833498 366 10 0.0938557 439 10 0.083062 629 10 0.104555 380 10 0.1474356 307 10 0.1389073 254 10 0.0185024 349 9 0.083563 257 9 0.038708 454 9 0.1219808 262 9 0.049387 369 8 0.0657859 531 10 0.0544079 160 10 0.038040 414 10 0.2234727 179 10 0.0522357 377 9 0.069898 260 10 0.052399 133 8 0.061601 471 10 0.0747103 406 10 0.0691945 332 10 0.405678 181 9 0.108075 343 10 0.0329883 397 9 0.066279 492 10 0.327747 465 10 0.0152910 383 10 0.0056340 236 9 0.000000 567 10 0.011111 213 9 0.064335 275 11 0.0473286 504 10 0.0245638 548 10 0.0216504 531 10 0.0291289 405 9 0.013245 556 10 0.035571 504 10 0.0954525 0.0693203 0.100767 0.069014 0.06985808 0.118766 0.0866099 0.0905364 0.066290 0.092204 0.142918 0.1229610 0.0254693 0.073045 0.039269 0.0977740 0.065765 0.0653071 0.05722500 0.054870 0.168818 0.0164721 0.082262 0.091840 0.073879 0.0605681 0.0888513 0.099600 0.116639 0.0309767 0.058935 0.309147 0.01393762 0.0080371 0.00000000 1.3304e-02 0.067794 0.0341673 0.0173533 0.0230823 0.026756 0.0088676 0.0356114 8 0.072170 0.105081 -0.02116662 10 0.095353 0.242762 -0.14740929 9.9999e-01 0.10955636 insignificant 1.0000e+00 1.000000 insignificant 9.9803e-01 0.71468946 insignificant 1.0000e+00 1.00000 insignificant -0.0400796 0.2946139 insignificant 1 insignificant 0.071964 0.0238861 5.3382e-02 10 0.071582 0.0370223 3.4560e-02 8.5488e-08 9.3151e-01 weaklyHypermeth 1.1873e-06 1.0000e+00 weaklyHypermeth 1.0417e-07 9.9988e-01 weaklyHypermeth 4.1667e-06 1.0000e+00 weaklyHypermeth 0.06466040 4.5714e-04 weaklyHypermeth 1.4286e-02 weaklyHypermeth 0.072012 0.018475 0.05303924 10 0.078090 0.022866 0.05522383 1.5787e-08 1.0000e+00 weaklyHypermeth 1.1276e-06 1.0000e+00 weaklyHypermeth 4.2012e-08 9.9999e-01 weaklyHypermeth 8.4024e-06 1.0000e+00 weaklyHypermeth 0.06377859 3.3103e-06 weaklyHypermeth 0.00110344 weaklyHypermeth 0.104492 0.0238751 0.0818051 10 0.183400 0.0341744 0.1492255 1.9293e-04 1.0000e+00 weaklyHypermeth 2.2176e-03 1.0000e+00 weaklyHypermeth 2.4878e-06 1.0000e+00 weaklyHypermeth 8.5787e-05 1.0000e+00 weaklyHypermeth 0.1047400 1.4082e-02 weaklyHypermeth 2.2353e-01 insignificant 0.103928 0.0184748 0.08266546 10 0.095533 0.022866 0.0726676 8.0441e-05 1.0000e+00 weaklyHypermeth 2.8729e-03 1.0000e+00 weaklyHypermeth 5.1977e-06 1.0000e+00 weaklyHypermeth 8.6628e-04 1.0000e+00 weaklyHypermeth 0.1038582 0.01359233 weaklyHypermeth 0.501614 insignificant 0.0234915 0.0184748 0.00203085 10 0.0252365 0.0228657 0.0023708 8.0696e-01 8.3308e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.97445311 5.3986e-01 insignificant 1.00000 1.0000e+00 insignificant -0.00088182 9.3956e-01 insignificant 1.0000e+00 insignificant chr20 62166650 62167650 55367 TCEA2 ENSG00000171703 0.649304 503 7 0.546523 162 8 0.601651 172 10 0.668597 583 7 0.655167 115 8 0.645001 506 7 0.6979486 228 8 0.7116884 199 9 0.674450 192 9 0.610744 213 7 0.6693848 233 8 0.6384340 232 7 0.5848346 185 5 0.603194 145 7 0.680736 203 7 0.7273529 131 5 0.500000 18 1 0.6570937 1274 7 0.6896095 217 7 0.786499 385 8 0.7463520 158 10 0.6315072 195 10 0.735049 198 7 0.666880 96 6 0.561565 443 7 0.6703864 261 10 0.6661305 161 11 0.629557 112 8 0.674266 281 7 0.6909074 265 7 0.682676 283 10 0.732707 400 11 0.4962360 131 10 0.3286717 158 7 0.533482 98 7 0.432316 307 7 0.483085 176 12 0.6375459 282 10 0.6554999 596 7 0.6725597 358 7 0.5228448 495 6 0.669124 338 6 0.697330 376 8 0.6701632 0.6102969 0.648951 0.668183 0.57800857 0.721379 0.6515234 0.7172716 0.655102 0.601977 0.640721 0.6453926 0.6434596 0.536194 0.673690 0.6133866 0.630222 0.6368103 0.65805108 0.630229 0.552882 0.7124089 0.728502 0.711937 0.668856 0.6836497 0.6285153 0.739544 0.606973 0.6417667 0.705915 0.667541 0.46915352 0.4411640 0.45503049 5.5838e-01 0.453783 0.5795287 0.6424065 0.6775811 0.637947 0.6283309 0.6257077 4 0.673622 0.725228 -0.02943367 7 0.696657 0.691049 0.00560895 8.4301e-01 0.00354368 weaklyHypometh 1.0000e+00 0.506240 insignificant 8.0022e-01 0.02759968 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.0240881 0.2544682 insignificant 1 insignificant 0.673566 0.5572917 1.5886e-01 7 0.671379 0.5285148 1.4286e-01 3.2168e-13 4.8196e-01 weaklyHypermeth 7.1485e-12 1.0000e+00 weaklyHypermeth 2.1841e-07 9.1807e-01 weaklyHypermeth 8.0894e-06 1.0000e+00 weaklyHypermeth 0.16468789 9.3726e-03 weaklyHypermeth 1.5934e-01 insignificant 0.673566 0.673762 0.00670639 7 0.671379 0.730215 -0.05883600 6.6724e-01 4.4223e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.4592e-01 7.2313e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00643911 8.5650e-01 insignificant 1.00000000 insignificant 0.725097 0.5572917 0.1915966 7 0.681969 0.5285148 0.1534544 1.1978e-12 9.3121e-01 weaklyHypermeth 2.9945e-11 1.0000e+00 weaklyHypermeth 1.1341e-07 9.7920e-01 weaklyHypermeth 5.1551e-06 1.0000e+00 weaklyHypermeth 0.1887760 4.9196e-03 weaklyHypermeth 9.4607e-02 weaklyHypermeth 0.725097 0.6737621 0.03669547 7 0.681969 0.730215 -0.0482457 7.6229e-02 7.7325e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.9654e-02 9.3364e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0305272 0.40806961 insignificant 1.000000 insignificant 0.5572917 0.6737621 -0.17075291 7 0.5285148 0.7302149 -0.2017001 9.9988e-01 1.5673e-04 weaklyHypometh 1.0000e+00 2.5693e-03 weaklyHypometh 0.99673047 1.6438e-04 weaklyHypometh 1.00000 6.5754e-03 weaklyHypometh -0.15824878 1.4725e-02 weaklyHypometh 2.4957e-01 insignificant chr20 62324250 62325250 55370 MYT1 ENSG00000196132 0.907660 254 5 0.779215 138 6 0.807107 185 5 0.875893 172 5 0.571262 90 5 0.899904 264 6 0.6761381 159 5 0.7898346 141 5 0.886883 162 5 0.790077 162 5 0.8941817 207 6 0.6859610 149 5 0.7190296 144 6 0.520175 59 2 0.771421 185 5 0.6932906 97 5 0.765738 78 5 0.8883191 169 5 0.8621577 122 5 0.815741 212 5 0.6911663 75 5 0.7187771 95 5 0.698872 133 5 0.687798 66 3 0.872222 100 5 0.8498810 118 5 0.7417125 132 6 0.659864 83 5 0.759834 112 5 0.8931583 181 6 0.892732 140 6 0.941605 278 5 0.6328356 113 5 0.8036508 110 5 0.687500 84 4 0.722778 39 4 0.815939 107 6 0.8903397 161 6 0.7390767 264 5 0.7043792 238 5 0.7586625 146 5 0.819623 275 5 0.880357 192 5 0.8825692 0.7783665 0.795471 0.812964 0.75406149 0.851606 0.8173711 0.7879289 0.837033 0.891053 0.858669 0.7926641 0.7548780 0.838497 0.808550 0.7713626 0.885288 0.8265947 0.86431093 0.803795 0.861214 0.8215681 0.828561 0.836795 0.934909 0.8713654 0.8040074 0.887631 0.743754 0.8586513 0.839341 0.907388 0.72420965 0.7072793 0.72855945 6.8559e-01 0.875786 0.9096664 0.7429520 0.7396864 0.694548 0.7897200 0.8160210 5 0.827772 0.836748 -0.02430493 5 0.706683 0.761642 -0.05495832 7.1834e-01 0.10937188 insignificant 1.0000e+00 1.000000 insignificant 9.3157e-01 0.10342672 insignificant 1.0000e+00 1.00000 insignificant -0.0039691 0.9168075 insignificant 1 insignificant 0.827564 0.8192182 3.9267e-03 5 0.660754 0.7162365 -5.5483e-02 2.1777e-01 4.6698e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.4017e-01 4.1438e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02115893 6.5418e-01 insignificant 1.0000e+00 insignificant 0.827772 0.835874 0.05597283 5 0.706683 0.801525 -0.09484154 2.3090e-02 9.9866e-01 weaklyHypermeth 4.3566e-01 1.0000e+00 insignificant 1.4567e-02 9.4223e-01 weaklyHypermeth 3.8699e-01 1.0000e+00 insignificant -0.00042035 9.9176e-01 insignificant 1.00000000 insignificant 0.836748 0.8202614 0.0223947 5 0.761642 0.7780184 -0.0163767 1.5169e-01 3.9177e-01 insignificant 9.2492e-01 1.0000e+00 insignificant 4.3973e-01 5.7781e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0251280 6.1202e-01 insignificant 1.0000e+00 insignificant 0.836748 0.8358744 0.08553399 5 0.761642 0.801525 -0.0398832 5.8779e-03 7.2151e-01 weaklyHypermeth 1.3359e-01 1.0000e+00 insignificant 2.2136e-02 9.1260e-01 weaklyHypermeth 4.9192e-01 1.0000e+00 insignificant 0.0035487 0.93472140 insignificant 1.000000 insignificant 0.8202614 0.8358744 0.05793009 5 0.7780184 0.8015249 -0.0235065 3.3773e-02 8.7656e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.25090536 8.3472e-01 insignificant 1.00000 1.0000e+00 insignificant -0.02157928 6.7439e-01 insignificant 1.0000e+00 insignificant chr20 62333450 62334450 55371 MYT1 ENSG00000196132 0.911367 634 13 0.844593 470 14 0.855657 525 14 0.911088 688 11 0.924677 315 14 0.856464 691 13 0.7757242 437 14 0.8787659 528 14 0.854386 495 15 0.938264 507 15 0.8807049 602 15 0.7571389 311 15 0.7589236 618 15 0.931241 190 8 0.843987 458 15 0.8410444 281 11 0.804725 201 10 0.8733523 793 14 0.8555731 587 14 0.905127 529 14 0.8191809 218 12 0.7869665 305 11 0.884345 423 13 0.832018 166 10 0.923755 190 11 0.8884797 607 14 0.8687853 341 11 0.837919 235 14 0.840147 477 13 0.9009692 710 14 0.939342 698 14 0.942448 658 14 0.9025673 455 14 0.7952339 450 14 0.779740 760 9 0.728656 103 10 0.777310 300 15 0.8310069 599 14 0.9222187 767 11 0.9600374 575 14 0.8721711 419 11 0.880518 623 12 0.884202 680 11 0.9109591 0.8843017 0.904954 0.924133 0.92180785 0.909668 0.8700811 0.8528317 0.841899 0.918294 0.854988 0.8530227 0.8951555 0.945746 0.890146 0.8717390 0.774070 0.9357931 0.90281446 0.928882 0.883801 0.9076850 0.924271 0.891733 0.922897 0.9397633 0.8973824 0.909202 0.875898 0.9481050 0.918609 0.932113 0.90862572 0.8279091 0.84534613 8.1374e-01 0.844670 0.8810440 0.9328339 0.9523997 0.925495 0.9450873 0.9278833 10 0.879412 0.916468 -0.03519433 14 0.823809 0.775531 0.04827725 9.5461e-01 0.06035110 insignificant 1.0000e+00 1.000000 insignificant 9.4721e-01 0.21789425 insignificant 1.0000e+00 1.00000 insignificant -0.0118896 0.5323407 insignificant 1 insignificant 0.879400 0.8466442 2.7839e-02 14 0.813445 0.7701888 4.3256e-02 1.1589e-07 4.9016e-01 weaklyHypermeth 1.5875e-06 1.0000e+00 weaklyHypermeth 1.2463e-03 6.7535e-01 weaklyHypermeth 1.8062e-02 1.0000e+00 weaklyHypermeth 0.05772105 6.6336e-02 insignificant 7.6248e-01 insignificant 0.880179 0.945496 -0.03262147 12 0.852921 0.912999 -0.06007816 9.8001e-01 1.1435e-04 weaklyHypometh 1.0000e+00 1.2706e-02 weaklyHypometh 9.9450e-01 2.3259e-03 weaklyHypometh 1.0000e+00 1.4537e-01 insignificant -0.04368945 6.1470e-02 insignificant 0.77742272 insignificant 0.916650 0.8466442 0.0687527 14 0.821151 0.7701888 0.0509622 2.0313e-06 9.4977e-01 weaklyHypermeth 2.9872e-05 1.0000e+00 weaklyHypermeth 4.4207e-04 9.6738e-01 weaklyHypermeth 7.2471e-03 1.0000e+00 weaklyHypermeth 0.0696106 3.6047e-02 weaklyHypermeth 4.6814e-01 insignificant 0.917197 0.9454961 -0.01757622 12 0.872473 0.912999 -0.0405264 9.8171e-01 8.9437e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9063e-01 1.7850e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0317999 0.17568503 insignificant 1.000000 insignificant 0.8469617 0.9454961 -0.06164559 12 0.8183256 0.9129993 -0.0946737 9.9157e-01 2.4477e-04 weaklyHypometh 1.0000e+00 3.8246e-03 weaklyHypometh 0.98866172 5.5431e-04 weaklyHypometh 1.00000 1.5640e-02 weaklyHypometh -0.10141050 7.7623e-03 weaklyHypometh 1.6515e-01 insignificant chr21 14351950 14352950 55385 ENSG00000216319 0.815448 370 8 0.721869 246 8 0.758550 155 7 0.758589 230 8 0.690199 76 8 0.708020 522 8 0.7098315 104 8 0.7715224 169 8 0.725847 124 7 0.750716 95 8 0.7668090 274 8 0.6785714 57 7 0.7950500 161 7 0.902778 43 1 0.702419 160 7 0.7500000 32 3 0.661381 40 4 0.7073327 411 8 0.7685801 196 8 0.742519 552 8 0.7274866 96 6 0.7466490 142 7 0.802521 148 8 0.732769 70 6 0.704525 236 6 0.7221644 236 8 0.7809940 306 8 0.852941 39 3 0.681359 196 8 0.7966218 217 8 0.789488 274 8 0.783745 636 8 0.6460755 281 8 0.6563113 235 8 0.133683 314 8 0.588794 132 6 0.510433 132 8 0.6060241 291 8 0.7917624 334 8 0.8077936 370 8 0.7467606 319 8 0.799720 326 7 0.797662 305 8 0.8256577 0.7370589 0.764659 0.751536 0.73169508 0.718922 0.6835007 0.7776953 0.741949 0.777688 0.770352 0.6503968 0.8035744 0.865379 0.681434 0.7612792 0.686847 0.7399612 0.77999865 0.744480 0.725157 0.7369637 0.807173 0.709195 0.807718 0.7347465 0.7724439 0.848529 0.681291 0.8042095 0.794152 0.794816 0.65330612 0.6994544 0.11379486 6.1104e-01 0.617298 0.6300822 0.7840360 0.8179302 0.759233 0.7988272 0.8164755 3 0.785661 0.799537 -0.02611030 8 0.743782 0.763585 -0.01980335 9.6808e-01 0.03404235 weaklyHypometh 1.0000e+00 1.000000 insignificant 9.3829e-01 0.15459022 insignificant 1.0000e+00 1.00000 insignificant -0.0158037 0.4035151 insignificant 1 insignificant 0.785661 0.5965293 1.8266e-01 8 0.743782 0.5096522 2.3413e-01 3.9682e-18 9.9570e-01 weaklyHypermeth 1.2801e-16 1.0000e+00 weaklyHypermeth 1.7764e-08 9.9482e-01 weaklyHypermeth 7.6298e-07 1.0000e+00 weaklyHypermeth 0.22074824 4.0790e-02 weaklyHypermeth 5.4387e-01 insignificant 0.785661 0.852479 -0.05325586 8 0.743782 0.787381 -0.04359864 9.9950e-01 1.6906e-03 weaklyHypometh 1.0000e+00 1.0364e-01 insignificant 9.9568e-01 6.8249e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04443804 1.5027e-02 weaklyHypometh 0.41300287 insignificant 0.799307 0.5956679 0.2104946 8 0.734298 0.4530242 0.2812739 6.5919e-13 9.9931e-01 hypermethylated 1.6902e-11 1.0000e+00 hypermethylated 3.1195e-07 9.9816e-01 hypermethylated 1.2998e-05 1.0000e+00 hypermethylated 0.2365520 3.2121e-02 weaklyHypermeth 4.3403e-01 insignificant 0.799537 0.8524788 -0.02812232 8 0.763585 0.787381 -0.0237953 9.7480e-01 3.0858e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 8.9995e-01 1.2790e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0286343 0.12928467 insignificant 1.000000 insignificant 0.5965293 0.8524788 -0.23907806 8 0.5096522 0.7873806 -0.2777284 1.0000e+00 1.3865e-07 hypomethylated 1.0000e+00 4.2014e-06 hypomethylated 0.99998769 2.8252e-07 hypomethylated 1.00000 2.8252e-05 hypomethylated -0.26518628 2.1502e-02 weaklyHypometh 3.3080e-01 insignificant chr21 17821850 17822850 55468 ENSG00000200754 0.636281 351 16 0.458856 362 17 0.465703 139 13 0.710944 356 16 0.584932 128 11 0.564381 398 15 0.4439095 192 15 0.5601071 204 13 0.413475 183 10 0.614447 171 10 0.5551958 437 17 0.6802266 88 8 0.6437411 213 14 0.630816 162 14 0.665766 258 12 0.5291048 75 6 0.603506 394 9 0.5926416 333 15 0.6057380 135 12 0.612477 374 14 0.6525333 74 7 0.5745989 126 6 0.628343 239 15 0.551488 142 11 0.633307 133 10 0.5969521 358 15 0.6421132 134 8 0.408772 73 7 0.613932 217 13 0.7101871 275 13 0.628415 313 17 0.637901 343 13 0.5175906 280 15 0.5843002 172 13 0.632620 344 15 0.487179 50 4 0.530215 169 13 0.5486278 286 12 0.5802539 491 15 0.5903208 408 16 0.6180463 523 15 0.624653 275 10 0.665576 484 16 0.7079006 0.5378560 0.575549 0.710459 0.60274775 0.687107 0.5714358 0.6437433 0.590915 0.675750 0.689547 0.6705867 0.6081377 0.636998 0.708812 0.6598108 0.745234 0.6622184 0.70859227 0.658886 0.702327 0.6183608 0.694316 0.631372 0.789399 0.6423946 0.6059894 0.645081 0.642607 0.7661436 0.688158 0.751917 0.54119219 0.5644100 0.63784567 5.4526e-01 0.676065 0.5828870 0.6268837 0.6427792 0.616802 0.6679341 0.6928436 6 0.660610 0.676555 -0.01385118 11 0.555752 0.577511 -0.02175885 8.7953e-01 0.20076205 insignificant 1.0000e+00 1.000000 insignificant 9.9127e-01 0.07108608 insignificant 1.0000e+00 1.00000 insignificant -0.0279327 0.3286684 insignificant 1 insignificant 0.661940 0.5964643 7.5889e-02 13 0.579003 0.6109820 -3.1979e-02 2.0607e-03 9.6117e-01 weaklyHypermeth 1.8906e-02 1.0000e+00 weaklyHypermeth 8.4673e-02 9.9213e-01 insignificant 7.2370e-01 1.0000e+00 insignificant 0.02852370 3.2464e-01 insignificant 1.0000e+00 insignificant 0.661398 0.647409 0.02399591 16 0.564609 0.611315 -0.04670647 1.0790e-01 3.3007e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.7947e-02 4.2829e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03715751 1.3325e-01 insignificant 1.00000000 insignificant 0.677833 0.5964643 0.0878620 11 0.600467 0.6109820 -0.0105151 2.1345e-04 9.9432e-01 weaklyHypermeth 2.3983e-03 1.0000e+00 weaklyHypermeth 1.7341e-02 9.9965e-01 weaklyHypermeth 1.9267e-01 1.0000e+00 insignificant 0.0564564 8.1282e-02 insignificant 8.6470e-01 insignificant 0.677152 0.6474094 0.03511301 11 0.581527 0.611315 -0.0297877 1.6708e-01 4.1569e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.9756e-01 7.6126e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0092248 0.72833203 insignificant 1.000000 insignificant 0.5964506 0.6477064 -0.06235163 13 0.6115049 0.6404255 -0.0289205 9.8522e-01 2.4606e-02 weaklyHypometh 1.0000e+00 2.1775e-01 insignificant 0.99071888 4.6387e-01 insignificant 1.00000 1.0000e+00 insignificant -0.06568121 3.3036e-02 weaklyHypometh 4.4048e-01 insignificant chr21 29393650 29394650 55549 C21orf7 ENSG00000156265 0.819974 101 5 0.733934 144 5 0.794444 44 5 0.745667 110 5 0.675000 36 5 0.600239 138 5 0.4316378 44 5 0.7647186 63 5 0.569524 43 5 0.636593 47 5 0.6407085 158 5 0.7333333 25 2 0.7280632 78 5 0.778788 40 5 0.795238 82 5 0.8571429 12 0 1.000000 4 0 0.6022961 118 5 0.5544289 137 5 0.835920 129 5 0.6063492 35 5 0.4398810 33 5 0.752381 78 5 0.670303 55 5 0.766667 36 5 0.8731119 120 5 0.7448413 63 5 0.788889 26 2 0.721739 73 5 0.7702562 140 5 0.738885 106 5 0.860924 161 5 0.7668042 82 5 0.7285032 77 5 0.657813 121 5 0.866667 13 0 0.722356 54 5 0.8549483 99 5 0.6908754 90 5 0.8423913 98 5 0.7031596 108 5 0.899767 42 5 0.889864 94 5 0.8110518 0.6940039 0.795171 0.766931 0.69042056 0.727669 0.7095656 0.7888397 0.605029 0.696395 0.783469 0.7577882 0.7664660 0.795101 0.810859 0.8411215 0.831523 0.7937075 0.69821580 0.823286 0.721228 0.7089008 0.783267 0.755877 0.802181 0.8187596 0.6699637 0.814123 0.741885 0.7834612 0.747056 0.766088 0.77987334 0.6590382 0.66733303 8.8162e-01 0.566589 0.7554087 0.7087807 0.7753962 0.726628 0.9062589 0.8272668 2 0.756600 0.758099 -0.00954495 5 0.630917 0.734191 -0.10327307 9.8126e-01 0.30571020 insignificant 1.0000e+00 1.000000 insignificant 9.8142e-01 0.42728627 insignificant 1.0000e+00 1.00000 insignificant -0.0129697 0.7712742 lowCoverage 1 lowCoverage 0.757595 0.7085202 5.1097e-02 5 0.660010 0.8327935 -1.7278e-01 6.0172e-02 3.5189e-01 insignificant 3.9587e-01 1.0000e+00 insignificant 6.7123e-01 3.7997e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.05129941 2.6333e-01 lowCoverage 1.0000e+00 lowCoverage 0.757595 0.759259 -0.00762207 5 0.660010 0.859799 -0.19978900 9.7092e-01 1.6535e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9765e-01 1.4412e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.09032883 1.3251e-01 lowCoverage 1.00000000 lowCoverage 0.759521 0.7085202 0.0575287 5 0.775122 0.8327935 -0.0576717 1.6061e-01 9.2783e-01 insignificant 9.6173e-01 1.0000e+00 insignificant 6.3236e-01 8.9978e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0383297 4.2996e-01 lowCoverage 1.0000e+00 lowCoverage 0.759521 0.7592593 -0.00064455 5 0.775122 0.859799 -0.0846775 9.7327e-01 7.0678e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9694e-01 6.8470e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0773591 0.20401405 lowCoverage 1.000000 lowCoverage 0.7085202 0.7592593 -0.05886983 5 0.8327935 0.8597992 -0.0270057 9.9774e-01 4.6700e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.99507977 7.0557e-01 insignificant 1.00000 1.0000e+00 insignificant -0.03902942 5.0734e-01 lowCoverage 1.0000e+00 lowCoverage chr21 32012850 32013850 55605 ENSG00000217747 0.727154 144 9 0.436815 75 3 0.388889 20 2 0.449918 159 8 0.744643 52 3 0.593710 97 9 0.6000000 40 3 0.4805556 37 3 0.452381 19 3 0.500000 10 2 0.6822479 70 3 0.4888889 17 3 0.6428571 36 3 0.476852 26 3 0.571014 51 3 0.6666667 11 1 0.672464 56 3 0.6605739 149 7 0.7125220 70 7 0.631186 78 6 0.6142857 20 2 0.3333333 5 0 0.573958 62 5 0.798077 31 3 0.769231 32 3 0.5978070 103 8 0.7555556 13 2 0.388889 18 2 0.631667 55 3 0.6593915 94 9 0.623331 86 8 0.643254 107 9 0.5528846 45 3 0.5454545 23 2 0.517308 65 5 0.600000 58 4 0.487719 44 3 0.4854167 131 8 0.6648338 191 8 0.6663474 135 9 0.5682674 171 9 0.646745 116 7 0.599806 184 9 0.4842244 0.3173795 0.354776 0.409825 0.57531328 0.416188 0.5315789 0.4166667 0.312448 0.537759 0.429640 0.3795322 0.5213033 0.339669 0.494584 0.5438596 0.450020 0.4656363 0.55639098 0.552116 0.303258 0.1052632 0.536550 0.546221 0.580297 0.5537281 0.6725146 0.445198 0.504386 0.2527151 0.531489 0.466165 0.45091093 0.3891547 0.55263158 6.2764e-01 0.379686 0.5534290 0.5670426 0.4811454 0.479323 0.6060606 0.4399460 1 0.570370 0.614634 -0.04589298 3 0.648378 0.645720 0.00265829 9.8202e-01 0.01836461 lowCoverage 1.0000e+00 1.000000 lowCoverage 9.7115e-01 0.24249674 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.0367647 0.4448072 lowCoverage 1 lowCoverage 0.568838 0.6410959 -3.3999e-02 4 0.535743 0.4761462 5.9597e-02 9.4053e-01 3.3678e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.8898e-01 6.7588e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.04750311 1.3386e-01 lowCoverage 1.0000e+00 lowCoverage 0.569307 0.695980 -0.05451856 4 0.584447 0.699616 -0.11516888 8.5859e-01 5.0508e-02 lowCoverage 1.0000e+00 9.6499e-01 lowCoverage 8.6571e-01 4.4176e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.05023303 1.2759e-01 lowCoverage 1.00000000 lowCoverage 0.616883 0.6410959 0.0173630 3 0.699530 0.4761462 0.2233840 8.1454e-01 9.8192e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.6150e-01 9.9562e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0842679 7.4964e-02 lowCoverage 8.2378e-01 lowCoverage 0.615008 0.6959799 -0.00486336 3 0.672215 0.699616 -0.0274014 2.4973e-01 8.6214e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 4.7977e-01 7.4459e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0134683 0.76684027 lowCoverage 1.000000 lowCoverage 0.6428571 0.6959799 -0.01959854 6 0.5194322 0.6996161 -0.1801839 8.1967e-01 9.5388e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.85514379 9.5681e-01 insignificant 1.00000 1.0000e+00 insignificant -0.09773614 5.2158e-03 lowCoverage 1.3039e-01 lowCoverage chr21 32880850 32881850 55637 ENSG00000166984 0.871739 297 5 0.602622 202 5 0.695992 133 5 0.716932 201 5 0.490545 60 3 0.698723 292 5 0.6257143 84 4 0.4589657 121 5 0.587152 107 5 0.557630 118 5 0.6520892 253 5 0.3945360 57 4 0.6841261 144 5 0.655914 43 2 0.663451 157 5 0.2878571 75 3 0.568027 58 4 0.8994165 126 5 0.8225579 185 5 0.605976 253 5 0.6688372 80 5 0.7526077 71 5 0.735930 190 5 0.473558 103 5 0.612179 48 3 0.7331428 244 5 0.6117683 185 5 0.713719 44 4 0.694517 173 5 0.9094008 234 5 0.720536 195 5 0.697101 272 5 0.5925817 136 5 0.6476655 138 5 0.777306 268 5 0.770513 52 4 0.439890 94 5 0.8928434 167 5 0.7183620 219 5 0.8272093 249 5 0.7677708 160 5 0.766397 160 5 0.645174 240 5 0.8587022 0.7232026 0.757088 0.842778 0.68862462 0.851670 0.6221555 0.6638552 0.686278 0.714140 0.778260 0.4465866 0.7952509 0.851529 0.775336 0.4708225 0.625107 0.8997566 0.80279013 0.850415 0.805649 0.7499508 0.839555 0.781528 0.805310 0.8731418 0.7925680 0.801377 0.794932 0.9103420 0.851482 0.828830 0.65820854 0.4604526 0.84671685 7.2493e-01 0.615623 0.8793489 0.8456680 0.8008963 0.752897 0.7364428 0.7742728 4 0.763753 0.824905 -0.06857026 5 0.556342 0.592697 -0.03635481 9.9455e-01 0.06611434 insignificant 1.0000e+00 1.000000 insignificant 9.9978e-01 0.06997399 insignificant 1.0000e+00 1.00000 insignificant -0.0666097 0.1470151 lowCoverage 1 lowCoverage 0.763238 0.7204678 5.3920e-02 5 0.556342 0.5077782 4.8564e-02 2.2934e-01 9.4432e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.8602e-01 7.1538e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.05980152 4.4053e-01 lowCoverage 1.0000e+00 lowCoverage 0.764905 0.794747 -0.02131516 5 0.658456 0.673517 -0.01506087 3.5342e-01 2.0883e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.6042e-01 1.8445e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.11798425 1.9526e-02 lowCoverage 0.41804302 lowCoverage 0.825803 0.7213115 0.1117691 5 0.677368 0.5803180 0.0970498 1.3971e-02 9.9655e-01 weaklyHypermeth 1.1642e-01 1.0000e+00 insignificant 3.4351e-02 9.7769e-01 weaklyHypermeth 3.4011e-01 1.0000e+00 insignificant 0.0068081 9.2729e-01 lowCoverage 1.0000e+00 lowCoverage 0.827681 0.7947471 0.05008030 5 0.716188 0.673517 0.0426715 6.8459e-03 6.1563e-01 weaklyHypermeth 1.5213e-01 1.0000e+00 insignificant 1.2633e-02 3.6877e-01 weaklyHypermeth 3.4576e-01 1.0000e+00 insignificant -0.0513746 0.25094334 lowCoverage 1.000000 lowCoverage 0.7226792 0.7947471 -0.05674712 5 0.6214821 0.6735169 -0.0520348 9.5614e-01 2.9662e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.98339049 2.9689e-01 insignificant 1.00000 1.0000e+00 insignificant -0.05818273 4.4730e-01 lowCoverage 1.0000e+00 lowCoverage chr21 33849150 33850150 55665 SON ENSG00000159140 0.910714 56 5 0.939072 147 7 0.875196 79 7 0.933333 12 0 0.862558 88 5 1.000000 32 5 0.7043651 48 5 0.9033371 178 7 0.891497 45 7 0.971679 101 7 0.9257146 235 7 0.8800000 20 2 0.9543299 176 7 NA 0 0 0.957761 89 7 0.8452381 20 0 0.796825 50 5 0.9714286 40 5 0.9639473 253 7 1.000000 22 0 0.8148148 41 5 0.0000000 1 0 0.921429 50 5 0.757143 26 3 NA 0 0 0.9696280 236 7 0.7023810 27 2 1.000000 10 0 0.963423 220 7 0.9380381 217 7 0.983126 230 7 0.982143 42 5 0.9596774 151 7 0.9202621 234 7 1.000000 103 5 NA 0 0 0.952381 12 0 0.9275362 126 7 1.0000000 32 4 1.0000000 27 2 1.0000000 5 0 1.000000 5 0 0.928571 17 0 1.0000000 0.9476923 0.827839 1.000000 0.77407407 1.000000 0.7592593 0.8772710 0.869048 0.959559 0.933977 1.0000000 0.9895833 NA 0.955556 0.7500000 0.896296 1.0000000 0.94588306 1.000000 0.962963 NA 0.900000 0.933333 NA 0.9561997 0.8333333 1.000000 0.951190 0.9515693 0.985017 1.000000 0.95833333 0.8623188 1.00000000 NA 0.888889 0.9710145 1.0000000 1.0000000 1.000000 1.0000000 1.0000000 0 0.919574 0.951818 -0.03277066 6 0.923376 0.944601 -0.02122489 9.6768e-01 0.01402668 weaklyHypometh 1.0000e+00 1.000000 insignificant 7.1027e-01 0.13886544 insignificant 1.0000e+00 1.00000 insignificant 0.0887397 0.3413030 lowCoverage 1 lowCoverage 0.919574 0.9440895 -2.5248e-02 5 0.923376 0.9416621 -1.8286e-02 8.0264e-01 3.6144e-03 weaklyHypometh 1.0000e+00 3.0120e-01 insignificant 9.6952e-01 2.5112e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.04212938 7.2498e-02 lowCoverage 7.9668e-01 lowCoverage 0.919574 0.988372 -0.06760901 0 0.923376 0.987013 -0.06363701 9.9987e-01 7.2370e-04 noCoverage 1.0000e+00 5.1693e-02 noCoverage 1.0000e+00 7.2644e-05 noCoverage 1.0000e+00 1.4529e-02 noCoverage -0.07587232 3.3800e-03 lowCoverage 0.17789706 lowCoverage 0.951818 0.9440895 0.0082798 5 0.944601 0.9416621 0.0029388 5.4999e-01 1.4043e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.2138e-01 7.9406e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.1308691 1.6922e-01 lowCoverage 1.0000e+00 lowCoverage 0.951818 0.9883721 -0.03941830 0 0.944601 0.987013 -0.0424121 9.9572e-01 9.9237e-05 noCoverage 1.0000e+00 2.4809e-02 noCoverage 9.9999e-01 2.4925e-04 noCoverage 1.0000e+00 8.3082e-02 noCoverage -0.1646120 0.09162526 lowCoverage 1.000000 lowCoverage 0.9440895 0.9883721 -0.05036443 0 0.9416621 0.9870130 -0.0453509 9.9439e-01 1.5388e-02 noCoverage 1.0000e+00 1.4517e-01 noCoverage 0.99985532 2.7978e-02 noCoverage 1.00000 3.2943e-01 noCoverage -0.03374294 1.3111e-01 lowCoverage 1.0000e+00 lowCoverage chr21 33911850 33912850 55666 DONSON ENSG00000159147 0.754889 211 9 0.636637 142 5 0.913553 61 4 0.846437 278 10 0.795833 89 6 0.820432 255 10 0.6135531 77 7 0.8037368 99 5 0.547619 42 2 0.743750 51 6 0.7563600 198 11 0.8115079 34 1 0.7950558 90 6 0.751409 69 5 0.739811 49 4 0.7777778 15 1 0.800000 10 0 0.8907960 201 8 0.8947368 93 9 0.916701 172 9 0.8431818 44 5 0.7575758 66 6 0.786057 113 10 0.877137 47 4 0.875663 124 5 0.8068011 174 10 0.8509091 50 5 0.969231 26 1 0.801587 78 6 0.7315789 164 10 0.803654 134 10 0.784840 261 10 0.6849254 102 6 0.8080808 83 5 0.881618 208 10 0.874126 52 3 0.674707 127 7 0.8496666 182 10 0.7163877 195 9 0.9062943 281 9 0.8873872 249 9 0.916226 105 8 0.791453 292 10 0.8487704 0.8205542 0.762885 0.853857 0.87352941 0.873494 0.8357843 0.8716153 0.689076 0.736029 0.845404 0.8181022 0.7182663 0.777668 0.745227 0.8627451 0.937532 0.9402728 0.92116320 0.965173 0.948529 0.9026945 0.795420 0.879085 0.807821 0.9070010 0.7550802 0.973220 0.924837 0.8803922 0.858637 0.809531 0.74468636 0.8856209 0.88285035 7.9206e-01 0.687191 0.9058139 0.9417682 0.9540890 0.922122 0.9242099 0.8129844 0 0.816190 0.862960 -0.03724401 10 0.808517 0.730608 0.07790940 9.4540e-01 0.12418085 insignificant 1.0000e+00 1.000000 insignificant 8.6554e-01 0.15788069 insignificant 1.0000e+00 1.00000 insignificant -0.0434882 0.1364106 insignificant 1 insignificant 0.816025 0.8236074 1.1120e-02 10 0.794840 0.7846497 1.0190e-02 4.7489e-01 8.5010e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.1217e-01 7.8762e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01499080 7.4041e-01 insignificant 1.0000e+00 insignificant 0.815778 0.866310 -0.04259142 9 0.779058 0.733870 0.04518837 6.9145e-01 1.7447e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.3593e-01 4.2357e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.06301978 2.0007e-01 insignificant 1.00000000 insignificant 0.863636 0.8236074 0.0398451 10 0.782794 0.7846497 -0.0018557 7.5962e-02 8.5053e-01 insignificant 5.1675e-01 1.0000e+00 insignificant 2.0226e-01 9.6872e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0284974 5.2096e-01 insignificant 1.0000e+00 insignificant 0.863994 0.8663102 0.00081239 9 0.785317 0.733870 0.0514468 4.8174e-01 6.8956e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.5213e-01 7.7838e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0195316 0.66519689 insignificant 1.000000 insignificant 0.8231383 0.8663102 -0.04094264 9 0.7680843 0.7338699 0.0342144 9.8519e-01 1.2266e-01 insignificant 1.0000e+00 8.4013e-01 insignificant 0.95848491 2.8077e-01 insignificant 1.00000 1.0000e+00 insignificant -0.04802898 4.0004e-01 insignificant 1.0000e+00 insignificant chr21 33975750 33976750 55670 ITSN1 ENSG00000205726 0.863102 121 6 0.738707 76 5 0.792532 75 5 0.873737 59 6 0.747354 30 3 0.819359 140 5 0.6244048 37 5 0.7756944 56 5 0.871212 41 4 0.616667 43 3 0.8836867 110 6 0.7547619 43 3 0.8644180 71 3 0.500000 4 0 0.780952 53 5 0.8850733 39 3 0.693452 18 1 0.8903541 58 4 0.7659787 89 5 0.864234 99 3 0.8500000 14 1 0.9316239 38 3 0.713753 95 6 0.820960 32 2 0.829167 61 3 0.6742532 108 5 0.7118715 58 5 0.781818 54 4 0.566667 52 4 0.8995179 107 4 0.780556 102 5 0.831245 131 6 0.7053281 57 4 0.8333333 51 6 0.774106 137 5 0.692593 53 5 0.703321 79 4 0.7998221 97 5 0.8885720 119 6 0.8088095 130 6 0.8802114 104 4 0.918045 131 4 0.783997 93 5 0.8834506 0.7083937 0.751188 0.868277 0.75125125 0.797998 0.7467503 0.8200826 0.891482 0.827327 0.868996 0.7942907 0.8566066 0.764260 0.888031 0.8764726 0.691074 0.8752266 0.84772400 0.841477 0.861696 0.8706399 0.799104 0.774638 0.773423 0.7831847 0.8026748 0.868141 0.828829 0.8999889 0.800300 0.871853 0.74935462 0.7900901 0.81181906 7.0771e-01 0.722238 0.8109891 0.9069396 0.8465251 0.836125 0.8931481 0.8943174 2 0.831220 0.830986 -0.00203973 5 0.706589 0.705209 0.00137956 5.7771e-01 0.63281918 insignificant 1.0000e+00 1.000000 insignificant 8.4924e-01 0.38820166 insignificant 1.0000e+00 1.00000 insignificant -0.0023352 0.9512990 lowCoverage 1 lowCoverage 0.831746 0.8080169 5.3548e-02 5 0.729543 0.7296162 -7.3155e-05 3.8818e-02 9.9368e-01 weaklyHypermeth 2.6957e-01 1.0000e+00 insignificant 1.3151e-01 9.3218e-01 insignificant 9.5993e-01 1.0000e+00 insignificant 0.02886699 4.0680e-01 lowCoverage 1.0000e+00 lowCoverage 0.832140 0.883882 -0.04848517 3 0.737403 0.772790 -0.03538743 9.9959e-01 1.5326e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.9426e-01 5.7666e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.07564304 5.0151e-02 lowCoverage 0.71643593 lowCoverage 0.832547 0.8080169 0.0492759 5 0.728010 0.7296162 -0.0016060 5.5133e-02 9.9616e-01 insignificant 3.9381e-01 1.0000e+00 insignificant 2.0419e-01 8.0837e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0312022 4.2502e-01 lowCoverage 1.0000e+00 lowCoverage 0.833136 0.8838821 -0.04601965 3 0.735678 0.772790 -0.0371119 9.3391e-01 1.1686e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.0733e-01 1.5226e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0733078 0.08158574 lowCoverage 1.000000 lowCoverage 0.8097252 0.8838821 -0.10018439 3 0.8208183 0.7727901 0.0480282 9.9659e-01 4.3900e-03 lowCoverage 1.0000e+00 4.4976e-02 lowCoverage 0.99094236 9.0763e-03 lowCoverage 1.00000 1.3593e-01 lowCoverage -0.10451002 1.5829e-02 lowCoverage 2.5900e-01 lowCoverage chr21 34495750 34496750 55709 ENSG00000218528 0.000000 46 6 0.031056 179 6 0.026471 159 6 0.083333 12 0 0.000000 105 6 0.070370 70 6 0.0104905 208 6 0.0119048 124 6 0.027500 163 6 0.015152 113 6 0.0238706 164 6 0.0093915 194 6 0.0075758 163 6 NA 0 0 0.000000 172 6 0.0057471 194 6 0.018979 180 6 0.0000000 15 0 0.0092593 140 6 0.097222 57 6 0.0583333 75 4 0.1666667 19 2 0.050239 85 6 0.000000 67 6 0.283333 12 1 0.0075758 209 6 0.0000000 61 6 0.015152 56 6 0.025641 103 6 0.0072464 215 6 0.018137 196 6 0.014520 140 6 0.0174603 130 6 0.0000000 142 6 0.000000 36 5 0.000000 25 3 0.088889 45 6 0.0250000 147 6 0.0000000 50 6 0.0208333 71 6 0.0277778 32 5 0.000000 12 0 0.450000 12 0 0.0000000 0.0329352 0.029321 0.092308 0.00000000 0.077949 0.0109656 0.0120879 0.029821 0.013986 0.024708 0.0099634 0.0083916 NA 0.000000 0.0053050 0.019666 0.0000000 0.01025641 0.107692 0.060769 0.1846154 0.049172 0.000000 0.159868 0.0083916 0.0000000 0.015385 0.028402 0.0080268 0.020090 0.016084 0.01831502 0.0000000 0.00000000 0.0000e+00 0.098462 0.0276923 0.0000000 0.0230769 0.030769 0.0000000 0.4076923 0 0.016273 0.020194 -0.00604419 6 0.018068 0.025766 -0.00769871 9.5917e-01 0.74529425 insignificant 1.0000e+00 1.000000 insignificant 8.9270e-01 0.86939623 insignificant 1.0000e+00 1.00000 insignificant -0.0303078 0.2580307 insignificant 1 insignificant 0.016273 0.0152381 5.3959e-05 6 0.018068 0.0182887 -2.2117e-04 4.4305e-01 2.6118e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.4853e-01 6.6028e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00170441 9.1569e-01 insignificant 1.0000e+00 insignificant 0.016273 0.028249 -0.01320469 4 0.018068 0.031553 -0.01348572 8.7751e-01 6.6747e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.9595e-01 9.3019e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.07612628 4.3525e-01 lowCoverage 1.00000000 lowCoverage 0.020194 0.0152381 0.0064359 6 0.025766 0.0182887 0.0074775 6.9836e-01 6.0766e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.8425e-01 8.7257e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0320122 2.7747e-01 insignificant 1.0000e+00 insignificant 0.020194 0.0282486 -0.00661107 4 0.025766 0.031553 -0.0057870 9.3362e-01 8.9405e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.0191e-01 9.1898e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0458185 0.63812329 lowCoverage 1.000000 lowCoverage 0.0152381 0.0282486 -0.01296963 4 0.0182887 0.0315532 -0.0132646 8.7013e-01 8.3992e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.95308089 8.3134e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage -0.07783069 4.2831e-01 lowCoverage 1.0000e+00 lowCoverage chr21 34677050 34678050 55711 FAM165B ENSG00000205670 0.801389 77 5 0.533333 39 5 0.633333 46 4 0.822222 41 5 1.000000 7 0 0.708669 110 5 0.6666667 14 1 0.6259380 58 5 0.548148 41 4 0.833333 42 5 0.7879654 78 5 1.0000000 1 0 0.7653509 80 4 0.500000 8 0 0.564444 39 4 0.5000000 9 0 0.800000 13 0 0.7872807 94 5 0.8666667 18 1 0.796517 79 5 0.7321429 33 4 0.7395604 61 5 0.661111 43 5 0.707937 25 3 0.721032 41 5 0.6349206 37 5 0.8000000 28 5 0.600000 12 0 0.700000 35 5 0.7310606 57 5 0.786364 57 5 0.691758 63 5 0.7704248 61 5 0.6984127 44 5 0.733333 29 5 0.750000 4 0 0.645714 31 5 0.7887912 70 5 0.7250000 28 2 0.7555556 44 5 0.7041667 75 5 0.695000 37 5 0.756818 60 5 0.7467391 0.4028986 0.630435 0.806763 1.00000000 0.691008 0.6521739 0.7419066 0.671498 0.782609 0.781385 NA 0.6939359 0.552786 0.526570 0.4565217 0.782609 0.7760297 0.85507246 0.748501 0.759317 0.7169135 0.631643 0.619048 0.725759 0.6128364 0.7826087 0.565217 0.673913 0.6781950 0.789526 0.683588 0.72612958 0.6846101 0.73913043 7.4130e-01 0.652174 0.8038700 0.7010870 0.7342995 0.692935 0.7032609 0.7465415 0 0.724832 0.709350 0.01228135 5 0.723358 0.726847 -0.00348891 5.5590e-01 0.83013211 insignificant 1.0000e+00 1.000000 insignificant 5.4565e-01 0.88372193 insignificant 1.0000e+00 1.00000 insignificant 0.0182391 0.6325290 lowCoverage 1 lowCoverage 0.724832 0.7364017 -7.9314e-03 5 0.723358 0.7812009 -5.7843e-02 3.4827e-02 1.5312e-01 inconclusive 2.4355e-01 1.0000e+00 insignificant 1.5901e-01 2.1513e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00404984 9.2020e-01 lowCoverage 1.0000e+00 lowCoverage 0.724915 0.733607 -0.00754646 5 0.725172 0.731886 -0.00671438 6.7422e-01 5.7438e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.6350e-01 8.1323e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00024519 9.9465e-01 lowCoverage 1.00000000 lowCoverage 0.709350 0.7364017 -0.0247816 5 0.726847 0.7812009 -0.0543544 5.9063e-01 6.0033e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 2.5376e-01 4.7289e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0222889 4.2651e-01 lowCoverage 1.0000e+00 lowCoverage 0.708419 0.7336066 -0.02028523 5 0.712216 0.731886 -0.0196706 8.4447e-01 4.1961e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.9487e-01 4.0582e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0184843 0.39207824 lowCoverage 1.000000 lowCoverage 0.7352941 0.7336066 -0.00561167 5 0.7374411 0.7318864 0.0055547 2.5604e-01 4.7680e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.34877892 3.8862e-01 insignificant 1.00000 1.0000e+00 insignificant 0.00380465 8.8197e-01 lowCoverage 1.0000e+00 lowCoverage chr21 35822250 35823250 55808 ENSG00000217393 0.859196 233 9 0.794008 286 9 0.796927 162 9 0.886640 108 6 0.901971 139 9 0.906358 189 8 0.8656271 208 9 0.8571369 232 9 0.794781 104 9 0.946494 199 7 0.9231882 257 9 0.7592593 37 3 0.9322344 83 6 0.937500 15 2 0.880689 229 9 0.8934902 99 6 0.797457 59 7 0.8108666 281 7 0.8666526 161 9 0.746436 257 6 0.6661706 36 4 0.6500869 121 4 0.804762 144 6 0.642347 67 6 0.903699 125 3 0.8980030 282 9 0.7684350 112 8 0.893519 46 5 0.842269 253 8 0.9247590 352 9 0.856904 276 8 0.833183 270 9 0.2748249 159 6 0.0416325 155 6 0.583668 250 6 0.342629 119 7 0.488167 125 8 0.1689229 355 9 0.8297292 232 9 0.8807511 166 8 0.8087825 204 6 0.755299 146 7 0.767389 211 7 0.8299222 0.8004263 0.797690 0.851072 0.88454133 0.905384 0.8677157 0.8326380 0.764000 0.969335 0.883190 0.7290448 0.8886059 0.858207 0.846613 0.9496713 0.797487 0.7692416 0.84802816 0.889521 0.839297 0.7232299 0.856569 0.806474 0.851892 0.8944932 0.8800178 0.895468 0.776935 0.9209267 0.890793 0.856886 0.22693270 0.0426893 0.51120634 2.3776e-01 0.536341 0.1965562 0.8443926 0.8633086 0.830443 0.7181749 0.8765621 4 0.862504 0.872780 -0.00603331 8 0.860804 0.857680 0.00312423 5.1161e-01 0.28260389 insignificant 1.0000e+00 1.000000 insignificant 2.2154e-01 0.29137459 insignificant 1.0000e+00 1.00000 insignificant 0.0508343 0.1398254 insignificant 1 insignificant 0.862504 0.2940671 5.6340e-01 8 0.860804 0.2818571 5.7895e-01 5.1029e-59 1.0000e+00 hypermethylated 1.0206e-56 1.0000e+00 hypermethylated 9.2135e-14 1.0000e+00 hypermethylated 1.3162e-11 1.0000e+00 hypermethylated 0.54120490 1.0224e-03 weaklyHypermeth 2.6091e-02 weaklyHypermeth 0.862504 0.824818 0.02759979 8 0.860804 0.828659 0.03214533 5.2216e-02 8.7349e-01 insignificant 8.2883e-01 1.0000e+00 insignificant 1.0608e-01 8.9145e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.04945549 1.0148e-01 insignificant 1.00000000 insignificant 0.872780 0.2940671 0.5687383 8 0.857680 0.2818571 0.5758227 2.1247e-37 1.0000e+00 hypermethylated 2.6559e-35 1.0000e+00 hypermethylated 1.7397e-10 1.0000e+00 hypermethylated 1.5815e-08 1.0000e+00 hypermethylated 0.4903706 1.0973e-03 weaklyHypermeth 2.9657e-02 weaklyHypermeth 0.872780 0.8248175 0.03263789 8 0.857680 0.828659 0.0290211 1.8481e-01 9.8017e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.5496e-01 9.2321e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0013788 0.97103126 insignificant 1.000000 insignificant 0.2940671 0.8248175 -0.54113440 8 0.2818571 0.8286587 -0.5468016 1.0000e+00 9.0808e-18 hypomethylated 1.0000e+00 8.2552e-16 hypomethylated 1.00000000 5.8959e-08 hypomethylated 1.00000 7.3699e-06 hypomethylated -0.49174941 1.3398e-03 weaklyHypometh 5.8251e-02 weaklyHypometh chr21 36372650 36373650 55827 SETD4 ENSG00000185917 0.770317 287 7 0.857073 239 6 0.795844 120 7 0.749504 207 6 0.819753 76 6 0.762468 291 7 0.8479497 86 7 0.7365664 156 7 0.705588 95 7 0.779365 35 3 0.8487174 233 7 0.8611111 45 2 0.8032895 133 5 0.918174 86 5 0.936355 86 5 0.6287879 61 5 0.866667 147 4 0.8784863 252 7 0.7511951 137 7 0.929484 210 7 0.7559524 32 2 0.7141304 47 4 0.886538 161 7 0.781575 83 4 0.906731 79 4 0.8753903 170 6 0.6291667 60 5 0.734394 50 5 0.824810 139 7 0.8893094 311 7 0.788163 278 7 0.819865 245 7 0.6995190 198 7 0.7764368 78 5 0.610777 140 3 0.878676 40 1 0.802525 150 8 0.6211785 247 7 0.8896687 280 7 0.8911114 197 6 0.8810618 329 7 0.788412 150 5 0.894878 279 7 0.8442710 0.7222801 0.749472 0.875971 0.84371585 0.863020 0.8291899 0.8152346 0.704918 0.743169 0.779950 0.7905282 0.8770492 0.860807 0.928616 0.7950820 1.000000 0.8068639 0.83269793 0.872766 0.718970 0.8524590 0.835507 0.776800 0.879887 0.8064580 0.7090164 0.877049 0.701187 0.7950697 0.866170 0.726892 0.76140895 0.7138214 0.65074382 8.8708e-01 0.877049 0.8323537 0.8304623 0.8522253 0.863596 0.8334760 0.8485650 3 0.862173 0.868278 0.00775795 7 0.684101 0.743229 -0.05912813 7.7965e-01 0.68049848 insignificant 1.0000e+00 1.000000 insignificant 8.6093e-01 0.70788301 insignificant 1.0000e+00 1.00000 insignificant 0.0118327 0.6961937 insignificant 1 insignificant 0.862173 0.7561547 1.0248e-01 7 0.684101 0.7089038 -2.4803e-02 1.7587e-04 9.9933e-01 weaklyHypermeth 1.8911e-03 1.0000e+00 weaklyHypermeth 1.0667e-01 9.9181e-01 insignificant 8.5339e-01 1.0000e+00 insignificant 0.08081610 1.2984e-01 insignificant 1.0000e+00 insignificant 0.866486 0.877733 -0.01987668 7 0.866308 0.882746 -0.01643844 8.5071e-01 2.0395e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.9906e-01 3.4708e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.05669152 5.8787e-02 insignificant 0.77742272 insignificant 0.868278 0.7561547 0.0976981 7 0.743229 0.7089038 0.0343252 2.1520e-03 9.9998e-01 weaklyHypermeth 2.0894e-02 1.0000e+00 weaklyHypermeth 1.6759e-01 9.9779e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0689834 2.0123e-01 insignificant 1.0000e+00 insignificant 0.872938 0.8777328 -0.02754820 7 0.859821 0.882746 -0.0229252 8.6937e-01 1.2128e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.7826e-01 2.5738e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0685242 0.04801315 weaklyHypometh 0.827813 insignificant 0.7625899 0.8777328 -0.12625600 7 0.7458760 0.8827465 -0.1368705 9.9935e-01 5.5845e-04 weaklyHypometh 1.0000e+00 7.8655e-03 weaklyHypometh 0.98947251 1.1806e-02 weaklyHypometh 1.00000 1.6866e-01 insignificant -0.13750762 2.3948e-02 weaklyHypometh 3.4759e-01 insignificant chr21 36407050 36408050 55828 SETD4 ENSG00000185917 0.702377 534 14 0.679094 461 14 0.612222 357 10 0.765470 309 11 0.609272 182 12 0.843867 511 12 0.5447724 312 12 0.6695941 396 14 0.716507 312 10 0.621095 256 10 0.7991293 640 17 0.6432363 166 7 0.6170980 346 12 0.722917 70 8 0.745979 298 11 0.6088235 80 6 0.627071 217 6 0.6080562 297 10 0.7939535 335 11 0.725108 612 12 0.5979996 173 13 0.7552156 110 9 0.654618 306 13 0.721785 192 11 0.674930 229 8 0.7223818 630 15 0.6481427 211 10 0.706536 126 8 0.728871 438 13 0.7286414 564 14 0.659204 590 14 0.786307 606 15 0.3124470 525 14 0.4390663 280 11 0.365574 697 13 0.494109 110 10 0.426762 403 14 0.6253539 722 12 0.6728475 367 10 0.8161779 458 16 0.6046377 368 11 0.714323 254 9 0.590002 336 13 0.8328838 0.7630567 0.686186 0.787002 0.78280418 0.840148 0.7558804 0.7977296 0.754003 0.797577 0.814899 0.7243906 0.7829305 0.831435 0.805126 0.7647699 0.739273 0.8028859 0.77634496 0.820479 0.781437 0.7819169 0.779533 0.815951 0.820131 0.7986472 0.7921826 0.851745 0.826067 0.8121981 0.801203 0.797278 0.52706164 0.7588309 0.68804132 6.8536e-01 0.655980 0.7558980 0.8046190 0.8355511 0.769017 0.7552232 0.7884861 8 0.779372 0.771449 -0.00715542 11 0.644891 0.647235 -0.00234376 8.9100e-01 0.49494225 insignificant 1.0000e+00 1.000000 insignificant 9.3410e-01 0.20973586 insignificant 1.0000e+00 1.00000 insignificant -0.0159372 0.5021932 insignificant 1 insignificant 0.779656 0.5873538 1.6508e-01 11 0.674958 0.3877376 2.8722e-01 8.4317e-37 1.0000e+00 weaklyHypermeth 5.2698e-35 1.0000e+00 weaklyHypermeth 7.4817e-12 1.0000e+00 weaklyHypermeth 6.2347e-10 1.0000e+00 weaklyHypermeth 0.23889672 1.7984e-03 weaklyHypermeth 3.8263e-02 weaklyHypermeth 0.779674 0.741447 0.00460036 10 0.671009 0.657690 0.01331920 4.4171e-01 2.0830e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.3954e-01 4.6408e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00318443 9.4565e-01 insignificant 1.00000000 insignificant 0.771765 0.5875046 0.1849764 11 0.669194 0.4168929 0.2523010 1.7016e-32 1.0000e+00 weaklyHypermeth 1.4180e-30 1.0000e+00 weaklyHypermeth 7.7032e-12 1.0000e+00 weaklyHypermeth 1.1005e-09 1.0000e+00 weaklyHypermeth 0.2548339 1.4543e-03 weaklyHypermeth 3.7290e-02 weaklyHypermeth 0.772585 0.7414470 0.01563320 10 0.704548 0.657690 0.0468581 5.1487e-01 5.3096e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.2351e-01 8.6470e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0191217 0.67943425 insignificant 1.000000 insignificant 0.5874177 0.7414470 -0.13466261 10 0.3818290 0.6576896 -0.2758605 1.0000e+00 2.0389e-15 weaklyHypometh 1.0000e+00 1.4563e-13 weaklyHypometh 0.99999275 1.0496e-04 weaklyHypometh 1.00000 5.1999e-03 weaklyHypometh -0.23571228 3.6180e-03 weaklyHypometh 1.0641e-01 insignificant chr21 36553150 36554150 55832 ENSG00000209949 0.735406 246 12 0.696304 262 11 0.722222 70 8 0.670633 255 11 0.668177 159 9 0.666169 306 12 0.6756619 129 11 0.7050335 174 9 0.719697 96 9 0.752635 108 9 0.6221493 373 11 0.7191667 72 6 0.8058531 156 9 0.781508 70 6 0.801588 117 9 0.7481892 72 6 0.593303 710 7 0.7382717 195 11 0.7375974 111 9 0.802202 193 12 0.6956749 81 6 0.9180672 52 4 0.787130 144 10 0.805266 116 11 0.788200 117 4 0.5933127 169 11 0.7834514 101 7 0.573333 57 4 0.689492 157 9 0.5944775 160 7 0.886611 167 9 0.681194 343 12 0.5848698 187 11 0.6637176 126 9 0.551016 118 6 0.541667 32 0 0.645809 91 10 0.6201042 145 12 0.7172196 259 12 0.7832909 352 12 0.6953532 338 12 0.779303 230 10 0.824572 295 12 0.7901849 0.6674235 0.745098 0.725980 0.77710130 0.729773 0.6988353 0.7497404 0.692577 0.824709 0.736644 0.7934174 0.7806879 0.837790 0.830657 0.7859748 0.703587 0.7159109 0.77219524 0.791047 0.811423 0.9269561 0.821460 0.771663 0.805343 0.7500420 0.7999018 0.560574 0.818441 0.7179622 0.897559 0.733443 0.69799064 0.6614359 0.50968858 6.0224e-01 0.701974 0.7108909 0.7707834 0.8046417 0.771241 0.7768441 0.8358754 3 0.754390 0.787605 -0.01310740 12 0.654705 0.593229 0.06147586 9.3406e-01 0.83886216 insignificant 1.0000e+00 1.000000 insignificant 9.8787e-01 0.76755353 insignificant 1.0000e+00 1.00000 insignificant -0.0149291 0.6779899 insignificant 1 insignificant 0.755440 0.6633238 9.1678e-02 10 0.713467 0.6115273 1.0194e-01 1.4304e-05 1.0000e+00 weaklyHypermeth 1.6632e-04 1.0000e+00 weaklyHypermeth 5.9494e-03 9.9999e-01 weaklyHypermeth 7.3449e-02 1.0000e+00 weaklyHypermeth 0.11689115 8.3268e-04 weaklyHypermeth 2.3130e-02 weaklyHypermeth 0.755060 0.804613 -0.02241116 12 0.663467 0.769295 -0.10582825 9.8976e-01 1.7289e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9336e-01 1.9489e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04185953 1.6549e-01 insignificant 1.00000000 insignificant 0.789666 0.6633238 0.1103104 10 0.636946 0.6115273 0.0254191 1.7726e-05 9.9990e-01 weaklyHypermeth 2.2726e-04 1.0000e+00 weaklyHypermeth 2.3980e-03 9.9994e-01 weaklyHypermeth 3.4647e-02 1.0000e+00 weaklyHypermeth 0.1318202 3.5956e-03 weaklyHypermeth 8.1260e-02 weaklyHypermeth 0.789921 0.8046133 -0.01861767 12 0.661946 0.769295 -0.1073486 9.7835e-01 7.6847e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.0881e-01 3.9377e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0269305 0.51498117 insignificant 1.000000 insignificant 0.6623563 0.8058583 -0.12892593 10 0.5560312 0.8077658 -0.2517346 1.0000e+00 4.7281e-05 weaklyHypometh 1.0000e+00 8.9209e-04 weaklyHypometh 0.99999247 9.2847e-04 weaklyHypometh 1.00000 2.0633e-02 weaklyHypometh -0.15875069 7.9479e-04 weaklyHypometh 4.1831e-02 weaklyHypometh chr21 37257350 37258350 55856 ENSG00000199806 0.744251 230 7 0.715144 125 7 0.563042 80 3 0.806597 161 7 0.689763 91 7 0.777342 309 7 0.7373950 70 3 0.7452850 102 7 0.747079 93 7 0.743956 78 7 0.7392774 253 7 0.6755991 36 3 0.7798335 131 7 0.649351 39 5 0.696992 114 7 0.6076681 59 3 0.714583 32 3 0.8049072 153 7 0.8131497 125 7 0.771695 221 7 0.7396825 51 7 0.8190476 65 7 0.837500 78 7 0.784314 40 3 0.694218 59 6 0.7371654 198 7 0.8318182 63 7 0.676282 42 3 0.666590 128 7 0.6638425 167 7 0.817549 230 7 0.771031 341 7 0.7635903 137 7 0.5986100 119 7 0.732702 144 7 0.597403 41 3 0.668987 85 7 0.7610500 171 7 0.7398049 129 7 0.7753433 186 7 0.7692831 157 7 0.733671 165 7 0.840023 130 7 0.7180122 0.7048501 0.630396 0.812551 0.81271845 0.772448 0.7303922 0.7588222 0.745740 0.761613 0.765945 0.7119549 0.8320737 0.716694 0.824307 0.7112639 0.659930 0.8050506 0.79648699 0.831842 0.661201 0.8135266 0.749940 0.813678 0.688866 0.7703071 0.8009442 0.726334 0.723908 0.7120574 0.798331 0.758389 0.75595272 0.6154232 0.71374527 7.0883e-01 0.670597 0.7480399 0.7626490 0.8092578 0.781883 0.7508677 0.8538113 3 0.772182 0.759234 0.00488640 7 0.749651 0.753740 -0.00408959 4.3985e-01 0.47061554 insignificant 1.0000e+00 1.000000 insignificant 4.9689e-01 0.25204066 insignificant 1.0000e+00 1.00000 insignificant -0.0271078 0.2718765 insignificant 1 insignificant 0.772182 0.7130560 5.1042e-02 7 0.749651 0.7076723 4.1978e-02 1.1026e-02 9.6901e-01 weaklyHypermeth 8.4166e-02 1.0000e+00 weaklyHypermeth 5.5206e-02 9.7260e-01 insignificant 5.1117e-01 1.0000e+00 insignificant 0.03908858 2.9487e-01 insignificant 1.0000e+00 insignificant 0.772182 0.792699 -0.02007658 7 0.749651 0.767125 -0.01747458 9.0743e-01 2.7810e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.1522e-01 1.3763e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04547954 8.7725e-02 insignificant 0.92156677 insignificant 0.759234 0.7130560 0.0455175 7 0.753740 0.7076723 0.0460680 9.0300e-03 7.6821e-01 weaklyHypermeth 7.7180e-02 1.0000e+00 weaklyHypermeth 1.8385e-02 8.5483e-01 weaklyHypermeth 2.0204e-01 1.0000e+00 insignificant 0.0661964 1.0605e-01 insignificant 1.0000e+00 insignificant 0.759234 0.7926988 -0.02373250 7 0.753740 0.767125 -0.0133850 8.6936e-01 1.8755e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.5713e-01 1.8198e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0183717 0.50784884 insignificant 1.000000 insignificant 0.7130560 0.7926988 -0.06877153 7 0.7076723 0.7671253 -0.0594530 9.3771e-01 8.8943e-03 weaklyHypometh 1.0000e+00 8.5522e-02 weaklyHypometh 0.98042463 1.7060e-03 weaklyHypometh 1.00000 3.4817e-02 weaklyHypometh -0.08456812 5.0071e-02 insignificant 5.7553e-01 insignificant chr21 37324750 37325750 55860 DSCR6 ENSG00000183145 0.662955 105 6 0.624416 92 6 0.640288 100 6 0.605433 119 6 0.783012 111 6 0.660114 100 6 0.6818496 106 6 0.6686376 76 6 0.674879 64 6 0.645833 51 5 0.7372740 151 6 0.7972832 67 3 0.7808776 97 6 0.616162 32 3 0.774815 65 6 0.7727053 54 3 0.943382 42 2 0.5764006 70 5 0.7313914 100 6 0.632064 101 6 0.8553922 62 6 0.6666667 22 2 0.601981 60 6 0.674603 41 5 0.507937 34 4 0.6819219 156 6 0.5657676 50 6 0.687322 44 3 0.770337 50 6 0.6973001 121 6 0.680817 125 6 0.617629 82 6 0.6572235 107 6 0.5350561 82 6 0.752632 116 6 0.500000 6 0 0.699455 62 6 0.6452295 118 6 0.6521164 100 6 0.7120811 119 5 0.5675325 79 5 0.533333 23 2 0.645543 89 6 0.6405737 0.6608927 0.679368 0.579774 0.80220261 0.634430 0.6927117 0.7004622 0.697785 0.687500 0.745299 0.8246289 0.8076634 0.693464 0.805031 0.7947088 0.806381 0.5507175 0.74370925 0.604166 0.866121 0.6226415 0.604004 0.680323 0.469003 0.6892778 0.5855937 0.713554 0.793211 0.6992256 0.685869 0.590337 0.67531026 0.5600268 0.78997021 6.7722e-01 0.739271 0.6288112 0.6197215 0.6847859 0.588438 0.5642408 0.6172852 0 0.733412 0.669421 0.03909999 6 0.702499 0.674125 0.02837340 1.1300e-01 0.54939981 insignificant 1.0000e+00 1.000000 insignificant 1.7418e-01 0.42600769 insignificant 1.0000e+00 1.00000 insignificant 0.0331824 0.3218180 insignificant 1 insignificant 0.733412 0.6863544 3.3643e-02 6 0.702499 0.6622183 4.0281e-02 9.8180e-03 8.2951e-01 weaklyHypermeth 7.6109e-02 1.0000e+00 weaklyHypermeth 9.1062e-02 5.7827e-01 insignificant 7.5885e-01 1.0000e+00 insignificant 0.06888935 1.5871e-01 insignificant 1.0000e+00 insignificant 0.733412 0.658537 0.04142233 6 0.702499 0.657958 0.04454126 1.9249e-02 3.8737e-02 weaklyHypermeth 3.7017e-01 8.2419e-01 insignificant 2.2660e-01 8.7244e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 0.07836734 7.3114e-02 lowCoverage 0.84882288 lowCoverage 0.669421 0.6863544 -0.0010642 6 0.674125 0.6622183 0.0119071 1.1634e-01 7.2451e-01 insignificant 7.3634e-01 1.0000e+00 insignificant 2.2176e-01 5.5608e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0357069 4.6894e-01 insignificant 1.0000e+00 insignificant 0.669421 0.6585366 0.01028612 6 0.674125 0.657958 0.0161679 2.1245e-01 4.2514e-02 inconclusive 1.0000e+00 1.0000e+00 insignificant 5.5343e-01 2.3839e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0451849 0.30034881 lowCoverage 1.000000 lowCoverage 0.6863544 0.6585366 -0.00683062 6 0.6622183 0.6579576 0.0042607 7.6246e-02 3.5554e-03 weaklyHypometh 1.0000e+00 3.7823e-02 weaklyHypometh 0.39697601 1.0048e-01 insignificant 1.00000 8.2364e-01 insignificant 0.00947799 8.5610e-01 lowCoverage 1.0000e+00 lowCoverage chr21 37353450 37354450 55861 ENSG00000212136 0.821462 228 5 0.781178 118 5 0.761356 86 5 0.825974 98 5 0.798601 59 5 0.865402 252 5 0.8561649 130 5 0.8748905 109 5 0.785064 74 5 0.859608 85 5 0.8042478 172 5 0.8164286 62 5 0.8145320 99 5 NA 0 0 0.857971 94 5 0.8300505 51 5 0.820000 74 5 0.8279033 128 5 0.8201148 124 5 0.829886 242 5 0.7811111 49 4 0.8179953 57 5 0.818668 162 5 0.857009 45 5 0.821429 39 5 0.8505853 157 5 0.7363986 58 5 0.692063 54 3 0.892208 76 5 0.7991361 170 5 0.883202 135 5 0.832594 363 5 0.8487815 91 5 0.8390476 81 5 0.615549 100 5 0.831429 40 4 0.810667 117 5 0.8453190 147 5 0.8651629 155 5 0.8912970 231 5 0.8463095 153 5 0.846215 175 5 0.907918 199 5 0.7930632 0.7944785 0.753765 0.834354 0.79255179 0.858939 0.8653057 0.8779931 0.772581 0.864549 0.790952 0.8020384 0.8279270 NA 0.857739 0.8275324 0.811006 0.7986948 0.82940909 0.819379 0.806158 0.8111470 0.804040 0.861978 0.818649 0.8421090 0.7311980 0.709269 0.866761 0.7958674 0.859647 0.819348 0.80842875 0.8387466 0.67097934 8.0735e-01 0.802588 0.8449857 0.8570063 0.8813896 0.818253 0.8318119 0.8913670 4 0.833698 0.813919 0.00731136 5 0.831529 0.825686 0.00584320 3.5649e-01 0.59295230 insignificant 1.0000e+00 1.000000 insignificant 5.6577e-01 0.69840244 insignificant 1.0000e+00 1.00000 insignificant 0.0085283 0.6434971 lowCoverage 1 lowCoverage 0.833698 0.7743056 2.3599e-02 5 0.831529 0.8118901 1.9639e-02 3.1690e-01 3.8921e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.4270e-01 4.5450e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02526270 5.2998e-01 lowCoverage 1.0000e+00 lowCoverage 0.833698 0.912377 -0.04409678 5 0.831529 0.876045 -0.04451601 9.7641e-01 6.3700e-04 weaklyHypometh 1.0000e+00 4.9000e-02 weaklyHypometh 9.5962e-01 4.2284e-04 weaklyHypometh 1.0000e+00 4.2284e-02 weaklyHypometh -0.04765250 1.2456e-02 lowCoverage 0.40372253 lowCoverage 0.813919 0.7743056 0.0094423 5 0.825686 0.8118901 0.0137961 4.6431e-01 5.9032e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.7374e-01 4.7886e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0167344 6.9224e-01 lowCoverage 1.0000e+00 lowCoverage 0.813919 0.9123768 -0.04865499 5 0.825686 0.876045 -0.0503592 9.9960e-01 6.5452e-03 weaklyHypometh 1.0000e+00 3.8501e-01 insignificant 9.9235e-01 3.2343e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.0561808 0.01654273 lowCoverage 0.501614 lowCoverage 0.7743056 0.9123768 -0.05500981 5 0.8118901 0.8760454 -0.0641553 9.6312e-01 2.5388e-02 weaklyHypometh 1.0000e+00 2.2270e-01 insignificant 0.92465493 2.1542e-02 weaklyHypometh 1.00000 2.6928e-01 insignificant -0.07291520 1.1008e-01 lowCoverage 1.0000e+00 lowCoverage chr21 38512450 38513450 55924 ENSG00000209982 0.856995 451 15 0.837530 139 11 0.800730 123 8 0.876983 332 15 0.844444 68 3 0.859237 434 15 0.7036783 104 8 0.8464427 107 8 0.773027 96 7 0.821032 83 8 0.8576793 256 15 0.7524006 60 6 0.8237876 157 11 NA 0 0 0.809321 103 9 0.7282051 51 5 0.706998 73 5 0.8639949 354 15 0.8430289 142 13 0.874575 311 15 0.8722222 43 3 0.9438117 100 12 0.868843 252 11 0.937420 71 6 0.889744 84 6 0.8674340 287 15 0.9351433 110 7 0.883267 43 3 0.794444 83 8 0.8493585 221 13 0.821401 190 14 0.829762 437 15 0.8027644 138 11 0.7197376 154 11 0.866660 316 15 0.872608 76 8 0.845767 53 4 0.7265938 235 13 0.9142062 347 15 0.9049012 411 15 0.8916843 404 15 0.935224 410 15 0.909598 446 15 0.8766884 0.8544062 0.802638 0.906263 0.95113169 0.881046 0.8965367 0.8931506 0.849014 0.869562 0.878883 0.7536903 0.8988524 NA 0.871648 0.8533513 0.863340 0.9015549 0.88238806 0.910080 0.840036 0.8931800 0.875405 0.887187 0.798158 0.9217980 0.8837353 0.865790 0.785254 0.8695637 0.846656 0.889521 0.88537908 0.7190142 0.84997528 8.6627e-01 0.790393 0.8001338 0.9110666 0.9290221 0.896965 0.9138564 0.9313902 2 0.864983 0.858407 0.00229917 14 0.834131 0.864028 -0.02989662 7.1415e-01 0.37781513 insignificant 1.0000e+00 1.000000 insignificant 9.5585e-01 0.00885209 inconclusive 1.0000e+00 1.00000 insignificant -0.0596626 0.0037104 weaklyHypometh 1 insignificant 0.864904 0.8261317 3.9709e-02 14 0.824374 0.8128743 1.1500e-02 6.7603e-03 9.9196e-01 weaklyHypermeth 5.4082e-02 1.0000e+00 weaklyHypermeth 2.5005e-01 9.5979e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00905307 7.7675e-01 insignificant 1.0000e+00 insignificant 0.865116 0.921209 -0.04892047 14 0.844648 0.909361 -0.06471359 9.9997e-01 4.0832e-05 weaklyHypometh 1.0000e+00 6.8053e-03 weaklyHypometh 9.9995e-01 7.9890e-04 weaklyHypometh 1.0000e+00 6.6575e-02 weaklyHypometh -0.09638113 1.4113e-06 weaklyHypometh 0.00070564 weaklyHypometh 0.858260 0.8261317 0.0373639 13 0.856030 0.8128743 0.0431553 2.2149e-02 9.9738e-01 weaklyHypermeth 1.7304e-01 1.0000e+00 insignificant 2.9021e-02 9.9995e-01 weaklyHypermeth 2.9613e-01 1.0000e+00 insignificant 0.0687157 6.0572e-02 insignificant 7.2109e-01 insignificant 0.858038 0.9212091 -0.05248920 14 0.847031 0.909361 -0.0623299 9.9998e-01 5.3823e-04 weaklyHypometh 1.0000e+00 6.7278e-02 weaklyHypometh 8.9132e-01 1.8483e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0367185 0.03110031 weaklyHypometh 0.676094 insignificant 0.8259526 0.9212091 -0.08465895 13 0.8011789 0.9093613 -0.1081824 1.0000e+00 3.3310e-06 weaklyHypometh 1.0000e+00 8.1245e-05 weaklyHypometh 0.99999085 8.1229e-03 weaklyHypometh 1.00000 1.2497e-01 insignificant -0.10543420 1.1883e-02 weaklyHypometh 2.1354e-01 insignificant chr21 38581850 38582850 55932 KCNJ15 ENSG00000157551 0.805057 305 10 0.605923 214 10 0.565248 165 10 0.765981 171 10 0.640590 88 10 0.673213 383 10 0.6294868 168 10 0.6923188 191 10 0.710886 114 6 0.677976 111 10 0.8369306 309 10 0.6204944 130 8 0.7836418 132 10 0.623333 32 5 0.725512 132 10 0.6400000 73 9 0.646281 62 5 0.6917951 207 10 0.7545614 150 10 0.767985 311 10 0.7138228 69 10 0.7527778 88 10 0.763712 150 10 0.733333 77 4 0.776190 65 9 0.7356256 263 10 0.7903764 138 10 0.748644 67 4 0.791550 146 10 0.7039962 196 12 0.729660 253 10 0.701568 470 10 0.5981965 175 10 0.5604630 135 10 0.551293 229 10 0.666990 74 5 0.559649 104 9 0.7400547 210 10 0.7907265 283 10 0.8146130 267 10 0.7907500 213 10 0.634360 184 10 0.851190 265 10 0.8263252 0.6908986 0.596838 0.792403 0.65008756 0.785660 0.7279927 0.7497765 0.732643 0.765602 0.868531 0.7187471 0.8101447 0.742931 0.820997 0.7094664 0.721207 0.7982673 0.79075732 0.836448 0.832955 0.8186404 0.787383 0.816502 0.779135 0.8029411 0.8782497 0.766589 0.809460 0.7944949 0.789158 0.738794 0.65067259 0.5838877 0.68199825 7.2596e-01 0.680748 0.8107313 0.7968425 0.8259272 0.810318 0.6675493 0.8848293 6 0.765951 0.773461 -0.00991158 10 0.704539 0.711445 -0.00690572 6.5130e-01 0.10995290 insignificant 1.0000e+00 1.000000 insignificant 5.1414e-01 0.00054358 weaklyHypometh 1.0000e+00 0.54358 insignificant -0.0522441 0.0097521 weaklyHypometh 1 insignificant 0.765951 0.6828479 7.0016e-02 10 0.704539 0.6290571 7.5482e-02 8.1524e-06 9.9141e-01 weaklyHypermeth 9.7052e-05 1.0000e+00 weaklyHypermeth 2.4719e-03 9.1079e-01 weaklyHypermeth 3.2103e-02 1.0000e+00 weaklyHypermeth 0.08008639 5.1411e-02 insignificant 6.3912e-01 insignificant 0.769029 0.807756 -0.03245271 10 0.749450 0.801616 -0.05216667 9.5038e-01 2.7658e-02 weaklyHypometh 1.0000e+00 6.9144e-01 insignificant 9.9121e-01 4.0009e-03 weaklyHypometh 1.0000e+00 2.2227e-01 insignificant -0.08346720 8.8615e-02 insignificant 0.92156677 insignificant 0.773461 0.6828479 0.0810659 10 0.711445 0.6290571 0.0823881 6.2357e-07 6.5176e-01 weaklyHypermeth 1.0058e-05 1.0000e+00 weaklyHypermeth 2.9523e-05 8.5340e-01 weaklyHypermeth 6.7099e-04 1.0000e+00 weaklyHypermeth 0.1323304 6.6194e-03 weaklyHypermeth 1.2035e-01 insignificant 0.779247 0.8077558 -0.01791956 10 0.770440 0.801616 -0.0311762 8.8880e-01 1.3737e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.7384e-01 5.4390e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0312231 0.45549604 insignificant 1.000000 insignificant 0.6887922 0.8077558 -0.10460990 10 0.6862441 0.8016164 -0.1153723 9.9866e-01 3.1257e-05 weaklyHypometh 1.0000e+00 6.0109e-04 weaklyHypometh 0.99957521 8.0995e-04 weaklyHypometh 1.00000 1.8836e-02 weaklyHypometh -0.16355359 9.1380e-03 weaklyHypometh 1.8276e-01 insignificant chr21 39080750 39081750 55952 ERG ENSG00000157554 0.506510 161 7 0.358396 137 7 0.141264 108 4 0.347436 133 6 0.230060 81 6 0.586806 178 5 0.4732949 83 6 0.4554113 140 4 0.271591 186 6 0.446667 64 4 0.3601020 119 4 0.5574934 86 4 0.3130447 105 5 0.449127 77 4 0.178682 118 4 0.5076797 54 3 0.557372 395 2 0.2915004 106 4 0.3204186 95 4 0.330092 118 4 0.3000000 11 1 0.3441255 53 4 0.726852 76 3 0.494231 59 4 0.277778 42 4 0.3644664 202 7 0.4328174 124 6 0.097359 67 3 0.456555 115 5 0.4138199 137 4 0.556968 177 7 0.556674 173 6 0.2296552 78 4 0.5744048 62 4 0.569968 206 5 0.431502 51 3 0.359394 86 4 0.6924881 167 8 0.7368996 248 8 0.5933970 136 6 0.4682709 71 2 0.618895 108 5 0.556800 104 5 0.5185825 0.3039700 0.276387 0.383285 0.29476406 0.471019 0.4301304 0.3918728 0.186565 0.375566 0.444339 0.3061855 0.1743800 0.496191 0.232620 0.3960607 0.794472 0.3074615 0.30877405 0.438972 0.490950 0.3894097 0.644042 0.292493 0.243338 0.2953950 0.2267647 0.232961 0.337424 0.2619376 0.318076 0.444262 0.41199875 0.3785822 0.20692543 1.0915e-01 0.310820 0.5592806 0.4991981 0.5119363 0.519742 0.5230842 0.4622023 3 0.456727 0.361943 0.09033703 5 0.460333 0.512530 -0.05219755 1.9148e-01 0.43621631 insignificant 1.0000e+00 1.000000 insignificant 6.7237e-01 0.40868391 insignificant 1.0000e+00 1.00000 insignificant -0.0343232 0.5377217 lowCoverage 1 lowCoverage 0.456727 0.4976816 4.6354e-02 4 0.460333 0.5689290 -1.0860e-01 2.2734e-01 6.9224e-04 lowCoverage 1.0000e+00 1.1537e-01 lowCoverage 4.0407e-01 6.8085e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.09208786 2.5700e-01 lowCoverage 1.0000e+00 lowCoverage 0.457053 0.594595 -0.10135895 4 0.481366 0.729584 -0.24821822 9.9997e-01 2.1829e-04 lowCoverage 1.0000e+00 1.9844e-02 lowCoverage 9.9999e-01 4.7125e-04 lowCoverage 1.0000e+00 4.2841e-02 lowCoverage -0.21070508 3.9109e-03 lowCoverage 0.19554508 lowCoverage 0.361650 0.4984615 -0.0472382 4 0.469819 0.5770739 -0.1072545 4.9226e-01 1.2379e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 5.7563e-01 3.8565e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0577647 5.0278e-01 lowCoverage 1.0000e+00 lowCoverage 0.361719 0.5937031 -0.18834785 4 0.482227 0.663258 -0.1810311 9.9074e-01 4.1083e-06 lowCoverage 1.0000e+00 1.3694e-03 lowCoverage 9.8908e-01 1.2052e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.1763819 0.01677152 lowCoverage 0.501614 lowCoverage 0.5000000 0.5937031 -0.13125022 7 0.6295351 0.6632583 -0.0337232 5.7157e-01 3.5229e-02 weaklyHypometh 1.0000e+00 2.7959e-01 insignificant 0.73312380 2.4487e-01 insignificant 1.00000 1.0000e+00 insignificant -0.11861722 1.8251e-01 lowCoverage 1.0000e+00 lowCoverage chr21 39200050 39201050 55968 ENSG00000220397 0.844935 325 10 0.831277 98 7 0.846939 98 7 0.819810 171 10 0.883153 68 7 0.803752 462 10 0.7422815 96 7 0.8175688 92 4 0.711111 95 7 0.854937 112 7 0.8605146 151 7 0.8394689 99 7 0.8532843 114 7 NA 0 0 0.839474 107 7 0.7965368 64 7 0.701535 914 12 0.7510105 197 10 0.8424301 137 10 0.866396 346 10 0.8816327 28 3 0.8936508 74 7 0.872874 219 10 0.898413 40 3 0.857143 33 3 0.7491227 194 9 0.9234694 45 6 0.796259 39 6 0.851832 60 7 0.8629390 281 10 0.735759 216 10 0.838601 400 10 0.7631070 90 7 0.7102564 95 7 0.643706 210 10 0.896016 97 10 0.781540 51 3 0.8016554 217 10 0.8866938 305 10 0.9217973 321 10 0.8136137 247 10 0.942837 269 10 0.901544 333 10 0.8481249 0.8446637 0.831240 0.826841 0.89348152 0.826523 0.7504730 0.8012013 0.714652 0.849952 0.860008 0.8371724 0.8500642 NA 0.831738 0.7647353 0.797528 0.8708209 0.82732275 0.861290 0.850863 0.8897131 0.843317 0.869841 0.815018 0.7826902 0.9156201 0.771193 0.844590 0.8289943 0.784389 0.855791 0.72951827 0.7011271 0.73118684 8.9365e-01 0.773066 0.7372085 0.8497523 0.9031329 0.838346 0.9073546 0.9139942 3 0.839562 0.853898 -0.02063063 10 0.611628 0.739298 -0.12766973 9.9811e-01 0.16592058 insignificant 1.0000e+00 1.000000 insignificant 9.9936e-01 0.05408787 insignificant 1.0000e+00 1.00000 insignificant -0.0306808 0.1536270 insignificant 1 insignificant 0.840011 0.7763158 5.1323e-02 10 0.655316 0.6760269 -2.0711e-02 7.3258e-04 5.8655e-01 weaklyHypermeth 7.1821e-03 1.0000e+00 weaklyHypermeth 6.0111e-02 8.3096e-01 insignificant 5.3196e-01 1.0000e+00 insignificant 0.05008017 2.2184e-01 insignificant 1.0000e+00 insignificant 0.843164 0.894915 -0.04964379 10 0.834039 0.885322 -0.05128300 9.9992e-01 7.6036e-05 weaklyHypometh 1.0000e+00 1.0862e-02 weaklyHypometh 9.9990e-01 3.1065e-04 weaklyHypometh 1.0000e+00 3.4517e-02 weaklyHypometh -0.07717022 1.9368e-02 weaklyHypometh 0.41804302 insignificant 0.853719 0.7763158 0.0712313 10 0.720677 0.6760269 0.0446496 1.7570e-02 9.9393e-01 weaklyHypermeth 1.4169e-01 1.0000e+00 insignificant 4.1147e-02 9.9151e-01 weaklyHypermeth 3.8455e-01 1.0000e+00 insignificant 0.0807610 7.3261e-02 insignificant 8.2309e-01 insignificant 0.855734 0.8949153 -0.03257401 10 0.871770 0.885322 -0.0135515 9.7889e-01 7.8649e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.0864e-01 1.0601e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0464894 0.12856976 insignificant 1.000000 insignificant 0.7780713 0.8949153 -0.10763613 10 0.7694888 0.8853217 -0.1158329 9.9926e-01 1.1058e-05 weaklyHypometh 1.0000e+00 2.4040e-04 weaklyHypometh 0.99965752 5.1973e-04 weaklyHypometh 1.00000 1.5286e-02 weaklyHypometh -0.12725039 1.4660e-02 weaklyHypometh 2.4957e-01 insignificant chr21 39279250 39280250 55978 ENSG00000205622 0.925991 298 7 0.823168 210 8 0.757897 180 5 0.881988 304 8 0.965385 86 8 0.928098 346 8 0.9450667 115 7 0.9554488 186 7 0.911806 126 5 0.943478 148 5 0.9334656 302 8 0.9018382 60 2 0.8622931 157 5 0.907225 121 4 0.747572 187 5 0.8081232 71 7 0.867778 50 2 0.7014556 197 5 0.9304053 113 5 0.848074 195 5 0.7782738 50 4 0.3579037 144 5 0.925018 110 6 0.849487 128 8 0.879979 89 6 0.7499037 226 8 0.8784673 125 7 0.956402 64 5 0.870598 124 5 0.7396460 247 8 0.888079 174 8 0.946066 302 8 0.0000000 271 8 0.1428571 67 5 0.000000 268 8 0.068182 41 3 0.037863 328 8 0.1566376 225 8 0.6657974 250 8 0.6288848 231 7 0.7896655 263 8 0.553462 184 5 0.694623 307 8 0.8778380 0.7782075 0.652902 0.873033 0.97748918 0.905955 0.9007871 0.9344335 0.874638 0.901214 0.924108 0.8439012 0.8647682 0.853208 0.844451 0.9154692 0.887446 0.5526457 0.90610287 0.890405 0.737734 0.5772012 0.863918 0.820149 0.840719 0.7601608 0.8536798 0.932377 0.825429 0.8208934 0.880143 0.939456 0.00000000 0.0000000 0.00000000 3.2698e-02 0.013285 0.0211416 0.6415794 0.5402605 0.772843 0.5447053 0.6466324 5 0.856397 0.828925 0.03196264 8 0.783505 0.857031 -0.07352550 1.9788e-02 0.99424935 weaklyHypermeth 1.0000e+00 1.000000 insignificant 1.4933e-01 0.98994325 insignificant 1.0000e+00 1.00000 insignificant 0.0590091 0.2539221 insignificant 1 insignificant 0.856397 0.0225000 8.4338e-01 8 0.783505 0.1390287 6.4448e-01 1.1383e-98 1.0000e+00 hypermethylated 3.7942e-96 1.0000e+00 hypermethylated 6.7895e-20 1.0000e+00 hypermethylated 2.2632e-17 1.0000e+00 hypermethylated 0.80973795 1.5421e-09 hypermethylated 1.5421e-07 hypermethylated 0.856645 0.672874 0.21895707 8 0.881444 0.684858 0.19658549 7.9848e-18 1.0000e+00 hypermethylated 1.9962e-15 1.0000e+00 hypermethylated 7.8756e-12 1.0000e+00 hypermethylated 3.5193e-09 1.0000e+00 hypermethylated 0.21084132 3.0373e-03 weaklyHypermeth 0.16873636 insignificant 0.828925 0.0225000 0.8084671 8 0.857031 0.1390287 0.7180022 2.2790e-59 1.0000e+00 hypermethylated 7.5967e-57 1.0000e+00 hypermethylated 8.3573e-16 1.0000e+00 hypermethylated 2.7858e-13 1.0000e+00 hypermethylated 0.7507289 3.0667e-10 hypermethylated 7.6668e-08 hypermethylated 0.828636 0.6728745 0.18128871 8 0.839160 0.684858 0.1543017 6.6767e-07 1.0000e+00 weaklyHypermeth 4.0480e-05 1.0000e+00 weaklyHypermeth 2.8994e-06 1.0000e+00 weaklyHypermeth 5.7987e-04 1.0000e+00 weaklyHypermeth 0.1518322 0.02582652 weaklyHypermeth 0.587083 insignificant 0.0216847 0.6728745 -0.63504635 8 0.0314073 0.6848581 -0.6534508 1.0000e+00 3.1918e-37 hypomethylated 1.0000e+00 1.5959e-34 hypomethylated 1.00000000 3.3933e-11 hypomethylated 1.00000 8.4832e-09 hypomethylated -0.59889663 2.4167e-06 hypomethylated 4.0278e-04 hypomethylated chr21 39315050 39316050 55984 ENSG00000205622 0.862363 376 6 0.917868 171 3 0.726328 82 3 0.784968 274 6 0.966667 87 3 0.949293 358 3 0.8737712 171 3 0.8932198 160 3 0.791425 72 3 0.966935 92 3 0.7856105 178 3 0.9384615 40 3 0.6690794 103 3 0.758621 89 3 0.904558 114 3 0.8000000 45 3 1.000000 93 3 0.7381708 798 5 0.7067012 322 3 0.976946 208 3 0.9791667 47 3 0.9086587 109 3 0.914270 190 3 0.913043 69 3 0.975782 332 3 0.6201457 263 5 0.7250000 95 3 0.750000 32 3 0.969079 325 3 0.5465025 245 3 0.920164 361 3 0.971896 205 5 0.9939394 169 3 0.9559140 182 3 1.000000 154 3 0.589744 117 5 0.824074 52 3 0.5594601 281 5 0.8005343 243 5 0.6562500 167 5 0.7766032 335 5 0.838210 367 5 0.886281 198 7 0.9062664 0.9179387 0.876722 0.953473 0.96568214 0.948694 0.9572042 0.8938898 0.791613 0.956490 0.905065 0.8954885 0.8919348 0.930743 0.903440 0.7974684 1.000000 0.9613306 0.95554124 0.961261 0.978903 0.9087917 0.966804 0.913043 0.976022 0.9797967 0.9662447 1.000000 0.969302 0.9571568 0.980109 0.942785 0.99424626 0.9545120 1.00000000 1.0000e+00 0.980778 0.9839866 0.9584122 0.9789030 0.955918 0.9733623 0.9715649 3 0.918586 0.958590 -0.02995658 3 0.806242 0.758897 0.04734541 8.0293e-01 0.03149133 lowCoverage 1.0000e+00 1.000000 lowCoverage 9.2890e-01 0.09384968 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.0010736 0.9827787 lowCoverage 1 lowCoverage 0.918565 0.8832808 -2.2342e-02 3 0.756242 0.7105542 4.5688e-02 1.7210e-01 4.2204e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.9837e-01 1.3499e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.03002750 7.3690e-01 lowCoverage 1.0000e+00 lowCoverage 0.918799 0.898318 -0.02931992 3 0.847909 0.878170 -0.03026102 9.6541e-01 1.7637e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.0629e-01 1.9141e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.05897370 2.2902e-01 lowCoverage 1.00000000 lowCoverage 0.958168 0.8815514 -0.0081979 3 0.689906 0.6914129 -0.0015065 8.3561e-01 4.4900e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.9953e-01 3.3709e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0289539 7.6319e-01 lowCoverage 1.0000e+00 lowCoverage 0.959013 0.8988417 -0.00073187 3 0.843219 0.881728 -0.0385086 9.4830e-01 8.8269e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.7760e-01 9.1543e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0579001 0.33690022 lowCoverage 1.000000 lowCoverage 0.8842105 0.8988417 -0.03353390 5 0.7895046 0.8817275 -0.0922229 6.4811e-01 4.4149e-02 weaklyHypometh 1.0000e+00 3.4189e-01 insignificant 0.73856293 9.9210e-01 insignificant 1.00000 1.0000e+00 insignificant 0.02894621 7.5885e-01 lowCoverage 1.0000e+00 lowCoverage chr21 39407650 39408650 55990 ENSG00000205622 0.739155 145 5 0.783133 98 5 0.683737 100 4 0.929853 81 4 0.852480 95 4 0.887533 145 4 0.7293530 83 4 0.7907787 96 5 0.805331 68 4 0.804664 82 4 0.8084703 139 5 0.6192308 71 4 0.9075421 80 5 0.776353 34 2 0.858961 86 4 0.6207459 60 4 0.575758 49 2 0.8152778 115 4 0.7950216 64 4 0.918885 149 4 0.9642857 41 4 0.9313447 65 3 0.741785 95 5 0.823553 53 4 0.877143 42 4 0.8708658 105 5 0.6880952 37 3 0.657895 34 2 0.534180 67 4 0.8392210 89 5 0.882115 115 5 0.851494 132 5 0.7836958 118 5 0.8826797 53 5 0.551515 26 3 0.800000 18 2 0.883810 84 5 0.7693824 84 4 0.9511224 123 4 0.9433198 116 3 0.8326623 92 5 0.734271 90 2 0.931093 147 5 0.8727962 0.8229123 0.732509 0.904845 0.93513002 0.853320 0.8500162 0.8246853 0.790694 0.935103 0.833056 0.8135215 0.8866770 0.873201 0.917163 0.7682676 0.890993 0.8738908 0.85582762 0.980199 0.934527 0.9405259 0.871838 0.837346 0.940972 0.9407092 0.8082011 0.879203 0.787030 0.9203433 0.928886 0.938394 0.86109645 0.9128767 0.91710492 8.4722e-01 0.960152 0.9260805 0.9425613 0.9233581 0.854471 0.8389901 0.9106019 2 0.825543 0.874286 -0.03402430 5 0.788572 0.808462 -0.01989032 5.5119e-01 0.02417524 weaklyHypometh 1.0000e+00 1.000000 insignificant 3.8527e-01 0.09166353 insignificant 1.0000e+00 1.00000 insignificant -0.0200515 0.6429896 lowCoverage 1 lowCoverage 0.825543 0.8590078 -4.4810e-02 5 0.788572 0.8192417 -3.0670e-02 8.4097e-02 2.9308e-02 weaklyHypometh 5.3226e-01 1.0000e+00 insignificant 5.2919e-01 5.7161e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00659947 9.0694e-01 lowCoverage 1.0000e+00 lowCoverage 0.825543 0.890845 -0.05042962 5 0.788572 0.890902 -0.10233041 9.7570e-01 9.8825e-03 weaklyHypometh 1.0000e+00 3.4409e-01 insignificant 9.6379e-01 4.4544e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.09338052 9.3368e-02 lowCoverage 0.95273758 lowCoverage 0.874286 0.8590078 -0.0070318 5 0.808462 0.8192417 -0.0107795 1.8858e-01 2.6263e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.2405e-01 2.2811e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0266510 6.7351e-01 lowCoverage 1.0000e+00 lowCoverage 0.874286 0.8908451 -0.02147528 5 0.808462 0.890902 -0.0824401 6.2027e-01 6.6920e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 5.0238e-01 7.0876e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0733290 0.21466411 lowCoverage 1.000000 lowCoverage 0.8590078 0.8908451 -0.02752663 5 0.8192417 0.8909023 -0.0716606 1.3934e-01 6.3473e-02 insignificant 1.0000e+00 4.7680e-01 insignificant 0.17199179 1.1707e-01 insignificant 1.00000 9.3654e-01 insignificant -0.09997999 1.5851e-01 lowCoverage 1.0000e+00 lowCoverage chr21 39697350 39698350 56001 WRB ENSG00000182093 0.9815886 96 4 0.692674 69 6 0.746703 97 5 0.7142857 43 3 0.7370464 74 5 0.782885 120 5 0.756594 92 6 0.7679198 94 6 0.6777778 49 5 0.6157407 85 7 0.684227 130 5 0.634998 73 5 0.6196524 70 6 0.693452 41 3 0.602814 66 6 0.6383929 56 5 0.5269841 34 3 0.8446811 67 5 0.636364 46 4 0.701506 111 5 0.615306 37 4 0.8777778 46 3 0.590136 70 2 0.771131 53 4 0.8452381 38 2 0.7511698 109 6 0.661981 56 3 0.4511785 37 3 0.811111 52 3 0.6685510 115 6 0.658874 65 6 0.698989 141 5 0.7535331 101 6 0.8535714 81 5 0.7870370 88 6 0.6666667 8 0 0.7177432 59 4 0.7709552 75 6 0.818182 75 2 0.8854167 21 2 0.7454545 52 3 1.0000000 12 0 0.783333 34 3 0.9633224 0.803934 0.788386 0.9315068 0.8781722 0.9393417 0.7911172 0.8349985 0.7488584 0.8487443 0.760938 0.716454 0.7962420 0.917482 0.7943130 0.7404599 0.5372907 0.9375794 0.7471980 0.858705 0.701337 0.89406393 0.7723418 0.8397750 0.84633421 0.8667680 0.7597594 0.6977999 0.843988 0.841897 0.8445828 0.893443 0.8311003 0.8796477 0.8820396 0.7178788 0.8364779 0.8141472 0.9090909 0.9269406 0.7275495 0.9238965 0.9132420 0 0.803040 0.813497 -6.9203e-03 6 0.662375 0.675460 -0.0130844 0.77137636 4.4031e-01 insignificant 1.00000 1.0000e+00 insignificant 0.8888276 0.51231748 insignificant 1 1.00000 insignificant 0.00269414 0.9482836 lowCoverage 1.00000 lowCoverage 0.809109 0.8519417 -0.01634103 5 0.708768 0.661663 0.04710508 6.0566e-01 4.8875e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.3146e-01 4.8352e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -5.5437e-02 1.2689e-01 lowCoverage 7.0495e-01 lowCoverage 0.816882 0.9329897 -0.09679502 3 0.771341 0.841771 -0.07043020 5.2458e-01 4.1087e-02 lowCoverage 1.0000e+00 6.5217e-01 lowCoverage 9.0483e-01 4.5047e-02 lowCoverage 1.0000e+00 6.7235e-01 lowCoverage -1.4366e-01 2.7577e-02 lowCoverage 3.7777e-01 lowCoverage 0.820126 0.8519417 -0.00978178 5 0.700473 0.661663 0.03881008 5.5733e-01 2.7675e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.1981e-01 3.5187e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -5.8131e-02 1.9756e-01 lowCoverage 9.5689e-01 lowCoverage 0.829706 0.9329897 -0.07882165 3 0.769600 0.841771 -0.07217119 5.2089e-01 2.1007e-02 lowCoverage 1.0000e+00 5.6776e-01 lowCoverage 7.2848e-01 5.6264e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.14635701 2.9278e-02 lowCoverage 5.4014e-01 lowCoverage 0.8540146 0.9329897 -0.07445281 3 0.771941 0.841771 -0.0698306 6.1112e-01 1.4706e-02 lowCoverage 1.0000e+00 1.0072e-01 lowCoverage 7.6352e-01 2.4119e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0882262 1.3480e-01 lowCoverage 0.71704532 lowCoverage chr21 41941350 41942350 56018 ENSG00000207503 0.9579710 82 5 0.886536 185 5 0.796517 163 5 1.0000000 8 0 0.9804762 77 5 0.920000 34 4 0.860235 171 5 0.9233211 145 5 0.8619351 87 5 0.9519390 106 5 0.946705 161 5 0.923984 89 5 0.9175599 191 5 NA 0 0 0.977500 111 5 0.9289474 69 5 0.7305407 118 5 0.7190476 25 2 0.930000 155 5 0.913636 39 3 0.880357 51 4 0.9166667 6 0 0.942857 98 5 1.000000 22 2 1.0000000 1 0 0.8745412 166 5 0.899990 68 5 0.9125000 54 5 0.937771 112 5 0.9793028 144 5 0.949068 183 5 0.961667 53 5 0.6702964 186 5 0.5804037 165 5 0.9583333 177 5 1.0000000 7 0 0.6466667 57 4 0.7805037 158 5 0.880000 35 5 0.9714286 31 3 0.9666667 24 3 1.0000000 4 0 0.786667 16 1 0.9690703 0.894827 0.786911 0.9872564 0.9761905 0.9024390 0.8761176 0.9134578 0.8718915 0.9471279 0.948392 0.933043 0.9230695 NA 0.9786585 0.9214805 0.7454386 0.7061556 0.9384437 0.915004 0.854094 0.90950845 0.9390244 1.0000000 NA 0.8957820 0.9024264 0.8932927 0.939262 0.974760 0.9511530 0.965447 0.6522056 0.5360615 0.9491870 1.0000000 0.6016260 0.7602190 0.8536585 0.9825784 0.9593496 1.0000000 0.8211382 0 0.899802 0.935282 -3.5359e-02 5 0.898897 0.931915 -0.0330182 0.98165024 1.5521e-02 weaklyHypometh 1.00000 4.4345e-01 insignificant 0.9517229 0.01104058 weaklyHypometh 1 0.48003 insignificant -0.03648010 0.1042426 lowCoverage 1.00000 lowCoverage 0.899802 0.7093333 0.19079274 5 0.898897 0.745104 0.15379354 1.0160e-07 9.8534e-01 weaklyHypermeth 1.1165e-06 1.0000e+00 weaklyHypermeth 5.0053e-02 9.2151e-01 insignificant 3.0707e-01 1.0000e+00 insignificant 1.2871e-01 1.3062e-01 lowCoverage 7.1768e-01 lowCoverage 0.899802 0.9090909 -0.00976131 2 0.898897 0.910415 -0.01151806 6.1392e-01 1.6983e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.9475e-01 1.1150e-02 lowCoverage 1.0000e+00 3.0136e-01 lowCoverage -1.9539e-02 6.6621e-01 lowCoverage 1.0000e+00 lowCoverage 0.935282 0.7093333 0.21944640 5 0.931915 0.745104 0.18681178 6.0623e-08 9.9377e-01 hypermethylated 7.7721e-07 1.0000e+00 hypermethylated 4.5383e-03 9.9650e-01 weaklyHypermeth 4.0886e-02 1.0000e+00 weaklyHypermeth 1.6519e-01 6.6324e-02 lowCoverage 4.4322e-01 lowCoverage 0.935282 0.9090909 0.02000521 2 0.931915 0.910415 0.02150018 4.6736e-01 5.8403e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.6344e-01 2.5697e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.01694097 6.9725e-01 lowCoverage 1.0000e+00 lowCoverage 0.7093333 0.9090909 -0.19117334 2 0.745104 0.910415 -0.1653116 9.7302e-01 1.5218e-03 lowCoverage 1.0000e+00 1.4091e-02 lowCoverage 9.9663e-01 1.4182e-02 lowCoverage 1.0000e+00 1.2226e-01 lowCoverage -0.1482517 1.0530e-01 lowCoverage 0.63816879 lowCoverage chr21 41953250 41954250 56019 ENSG00000207503 0.8894880 337 8 0.822712 300 8 0.796267 335 8 0.8627290 313 8 0.9286274 187 8 0.879309 391 8 0.908369 249 8 0.8370494 201 8 0.8074008 191 8 0.8693746 214 8 0.856566 269 8 0.922915 134 8 0.9102840 220 8 0.955000 45 5 0.890030 248 8 0.8523294 89 6 0.8068996 76 4 0.7253536 385 8 0.929504 241 8 0.857694 299 8 0.960345 83 6 0.7667625 88 5 0.919729 246 8 0.781899 171 7 0.9020833 82 8 0.8764345 398 8 0.837724 135 8 0.8752153 134 8 0.909284 243 8 0.9114320 375 8 0.898039 335 8 0.871265 413 8 0.7622262 272 8 0.7799840 294 8 0.9049716 259 8 0.7233444 76 7 0.7705277 191 8 0.8304673 421 8 0.913405 357 8 0.9012982 352 8 0.8973533 260 8 0.8226036 449 8 0.848992 320 8 0.8736769 0.795499 0.770065 0.9066487 0.8952708 0.8505322 0.8812394 0.8194621 0.8187402 0.8497127 0.852385 0.894176 0.8884803 0.898871 0.8712577 0.8594657 0.8151201 0.6929014 0.9270913 0.844204 0.931268 0.73927250 0.9105926 0.7586523 0.88787510 0.8877984 0.8254784 0.9505699 0.904134 0.911484 0.8730197 0.878719 0.6660144 0.6405323 0.8238415 0.6878369 0.8022624 0.7856111 0.8746660 0.8824167 0.8574965 0.8333684 0.8340113 6 0.848190 0.882353 -3.2944e-02 8 0.884563 0.840185 0.0443779 0.99984236 1.1911e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9977448 0.08029336 insignificant 1 1.00000 insignificant -0.01045597 0.6141940 insignificant 1.00000 insignificant 0.848061 0.7620621 0.09502658 8 0.861476 0.751423 0.11005333 9.7324e-04 2.9909e-01 weaklyHypermeth 6.2387e-03 1.0000e+00 weaklyHypermeth 2.5997e-01 3.3712e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.0142e-02 4.3536e-02 weaklyHypermeth 3.2489e-01 insignificant 0.848209 0.8619102 -0.02037894 8 0.873862 0.896885 -0.02302238 8.2566e-01 7.4319e-02 insignificant 1.0000e+00 9.0463e-01 insignificant 6.2154e-01 2.6800e-02 weaklyHypometh 1.0000e+00 5.3432e-01 insignificant -1.1335e-02 6.0984e-01 insignificant 1.0000e+00 insignificant 0.882418 0.7625661 0.12549621 8 0.898025 0.834914 0.06311090 8.3372e-04 9.1616e-01 weaklyHypermeth 5.9980e-03 1.0000e+00 weaklyHypermeth 1.1652e-01 8.4465e-01 insignificant 6.0049e-01 1.0000e+00 insignificant 8.0598e-02 2.7576e-02 weaklyHypermeth 2.3173e-01 insignificant 0.882418 0.8619102 0.01735155 8 0.898025 0.896885 0.00114037 4.5893e-01 5.7945e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.6978e-01 9.1464e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00087941 9.7122e-01 insignificant 1.0000e+00 insignificant 0.7624090 0.8618307 -0.11537708 8 0.814278 0.883995 -0.0697168 9.3932e-01 9.0700e-03 weaklyHypometh 1.0000e+00 6.3427e-02 weaklyHypometh 5.5638e-01 2.0349e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0814769 3.0515e-02 weaklyHypometh 0.27926232 insignificant chr21 41957250 41958250 56020 ENSG00000207503 0.8119089 242 7 0.763091 137 7 0.676496 145 7 0.8297072 273 7 0.8183673 57 7 0.883732 370 7 0.768599 113 7 0.7538471 172 7 0.8125264 134 7 0.8271635 176 7 0.856546 232 7 0.574206 59 6 0.7807728 320 7 0.844841 131 7 0.702968 182 7 0.6357143 25 2 0.6306122 30 4 0.6812885 343 7 0.759813 70 6 0.609696 225 7 0.833670 74 7 0.7682632 132 7 0.684249 167 7 0.857703 107 7 0.8194328 85 6 0.8138923 218 7 0.738095 88 7 0.8534014 78 7 0.741094 146 6 0.8580700 218 7 0.754961 209 7 0.856316 297 7 0.1282308 298 7 0.2214286 95 6 0.2537313 141 3 0.1904762 37 2 0.1800420 148 7 0.4591607 264 7 0.747962 189 6 0.7844924 202 6 0.7711346 178 6 0.6173014 183 6 0.761263 261 6 0.8438299 0.743637 0.741921 0.8393429 0.7744331 0.8769066 0.8040933 0.7586887 0.8142845 0.8625053 0.867161 0.672806 0.7704091 0.843794 0.7096833 0.6512789 0.6636621 0.7252674 0.8822225 0.876902 0.890105 0.76935293 0.8611649 0.8488251 0.83006869 0.8006213 0.7953343 0.8495118 0.720494 0.833596 0.8581224 0.865623 0.0400749 0.1608135 0.0328071 0.1164021 0.1618873 0.4607798 0.7636227 0.7554564 0.7583658 0.6917452 0.8151940 6 0.807334 0.833975 -2.1056e-02 7 0.641547 0.705118 -0.0635714 0.99720137 1.5233e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9976698 0.10310551 insignificant 1 1.00000 insignificant -0.04716743 0.0840211 insignificant 1.00000 insignificant 0.808107 0.2126144 0.59020948 7 0.697767 0.328787 0.36897963 3.6176e-52 9.9992e-01 hypermethylated 4.0195e-50 1.0000e+00 hypermethylated 5.3730e-13 9.8881e-01 hypermethylated 5.3730e-11 1.0000e+00 hypermethylated 5.1225e-01 2.3538e-05 hypermethylated 8.1166e-04 hypermethylated 0.808343 0.7680158 0.04012636 6 0.797447 0.742218 0.05522970 1.9525e-02 9.6779e-01 weaklyHypermeth 2.1939e-01 1.0000e+00 insignificant 1.3310e-01 8.3941e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.4664e-02 6.9817e-01 insignificant 1.0000e+00 insignificant 0.834528 0.2126144 0.60057042 7 0.725147 0.328787 0.39636056 7.4502e-40 1.0000e+00 hypermethylated 9.3127e-38 1.0000e+00 hypermethylated 1.6048e-11 9.9594e-01 hypermethylated 1.7832e-09 1.0000e+00 hypermethylated 5.5942e-01 2.1726e-05 hypermethylated 8.2023e-04 hypermethylated 0.835450 0.7680158 0.05644101 6 0.828740 0.742218 0.08652220 1.7341e-03 9.9745e-01 weaklyHypermeth 2.9391e-02 1.0000e+00 weaklyHypermeth 3.0998e-02 9.7749e-01 weaklyHypermeth 4.3592e-01 1.0000e+00 insignificant 0.06183157 1.2111e-01 insignificant 1.0000e+00 insignificant 0.2118126 0.7680158 -0.58239023 6 0.232899 0.742218 -0.5093184 9.9801e-01 1.3958e-23 hypomethylated 1.0000e+00 2.9918e-21 hypomethylated 9.9936e-01 8.0615e-08 hypomethylated 1.0000e+00 5.6311e-06 hypomethylated -0.4975858 1.7522e-05 hypomethylated 0.00159797 hypomethylated chr21 42004550 42005550 56023 ENSG00000207503 0.0185185 60 6 0.052402 145 6 0.122044 165 6 0.0416667 18 0 0.0088905 149 6 0.163207 62 6 0.008547 201 6 0.0571799 150 6 0.0667892 195 6 0.0174619 175 6 0.030996 185 6 0.041364 156 6 0.0146825 177 6 NA 0 0 0.061728 171 6 0.0037037 127 6 0.0356472 166 6 0.5277778 16 2 0.018813 141 6 0.059804 121 6 0.015152 52 6 0.0555556 23 1 0.079670 99 6 0.052083 66 6 0.1666667 14 0 0.0030864 189 6 0.062821 74 6 0.0185185 57 6 0.016204 159 6 0.0225080 232 6 0.041004 181 6 0.059722 126 6 0.2983665 139 6 0.5412879 124 6 1.0000000 1 0 0.1666667 16 0 0.4194444 32 3 0.2467010 155 6 0.101587 96 6 0.0446344 106 6 0.0000000 30 2 0.0722222 50 5 0.083333 28 2 0.0154712 0.043779 0.120315 0.0348101 0.0074275 0.1492094 0.0071405 0.0559080 0.0589631 0.0145884 0.028647 0.042347 0.0122664 NA 0.0616971 0.0030942 0.0388228 0.5548523 0.0157171 0.052941 0.012658 0.04641350 0.0665600 0.0498418 0.13924051 0.0025785 0.0609218 0.0154712 0.017053 0.020987 0.0364580 0.053270 0.2844300 0.5189586 NA 0.1561181 0.4369198 0.2466109 0.1022303 0.0460529 0.0000000 0.0704641 0.0949367 0 0.044961 0.038522 9.1397e-03 6 0.049039 0.037635 0.0114040 0.25431602 9.3098e-01 insignificant 1.00000 1.0000e+00 insignificant 0.0713224 0.91363639 insignificant 1 1.00000 insignificant 0.02170112 0.4733175 insignificant 1.00000 insignificant 0.044961 0.3426124 -0.29709822 6 0.049039 0.352857 -0.30381859 1.0000e+00 1.0923e-26 hypomethylated 1.0000e+00 2.1847e-24 hypomethylated 1.0000e+00 1.0241e-08 hypomethylated 1.0000e+00 1.0241e-06 hypomethylated -3.7429e-01 2.7977e-02 lowCoverage 2.2932e-01 lowCoverage 0.044961 0.0548387 -0.00746742 6 0.049039 0.068596 -0.01955725 2.1768e-01 1.7465e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.5187e-01 5.0306e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.0762e-02 7.4215e-01 lowCoverage 1.0000e+00 lowCoverage 0.038522 0.3426124 -0.30405961 6 0.037635 0.352857 -0.31522258 1.0000e+00 4.3731e-20 hypomethylated 1.0000e+00 1.0933e-17 hypomethylated 1.0000e+00 8.2631e-09 hypomethylated 1.0000e+00 1.3772e-06 hypomethylated -3.9600e-01 2.3450e-02 lowCoverage 2.0216e-01 lowCoverage 0.038522 0.0548387 -0.01698345 6 0.037635 0.068596 -0.03096124 6.1207e-01 2.3278e-03 weaklyHypometh 1.0000e+00 1.6627e-01 insignificant 4.9471e-01 1.7816e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01093955 6.2806e-01 lowCoverage 1.0000e+00 lowCoverage 0.3426124 0.0548387 0.29591810 6 0.352857 0.068596 0.2842613 1.7547e-08 1.0000e+00 hypermethylated 2.1934e-06 1.0000e+00 hypermethylated 8.7525e-05 1.0000e+00 hypermethylated 1.0941e-02 1.0000e+00 hypermethylated 0.3850556 2.5732e-02 lowCoverage 0.24741954 lowCoverage chr21 42020050 42021050 56024 ENSG00000207503 0.8351754 265 9 0.762665 110 5 0.830109 169 10 0.8134567 358 10 0.7168350 83 7 0.874240 262 10 0.791685 86 10 0.6514886 245 10 0.6669434 206 10 0.8360390 145 10 0.868857 319 10 0.720833 59 6 0.5753084 241 10 0.845765 132 10 0.800845 151 10 0.4429012 46 6 0.5000000 16 0 0.8253139 231 5 0.667187 133 5 0.751539 348 10 0.795066 115 9 0.7709644 201 10 0.867349 190 10 0.604972 63 5 0.8170212 108 7 0.7840596 195 10 0.728265 240 10 0.8146337 92 9 0.866147 193 10 0.7659714 275 10 0.731529 101 4 0.946465 164 5 0.2869148 262 10 0.3534256 134 4 0.3570299 274 8 0.4556140 115 8 0.2697950 226 10 0.4961686 168 5 0.894802 197 9 0.7998214 117 5 0.7551745 335 10 0.8048891 326 9 0.858027 100 4 0.8117099 0.797171 0.787330 0.8053562 0.6377135 0.8440876 0.7789642 0.7802653 0.7188433 0.8478714 0.795915 0.761809 0.5998163 0.809738 0.8699328 0.2069945 0.7785927 0.7544369 0.6356176 0.692962 0.687679 0.84643562 0.8812942 0.6103862 0.84789664 0.8486578 0.8430538 0.8803932 0.857445 0.784864 0.7077067 0.898522 0.4774835 0.4245849 0.5459390 0.8063608 0.5549353 0.4528737 0.9168850 0.8484645 0.8177330 0.8414129 0.7853522 4 0.763662 0.793965 -3.0803e-02 10 0.689090 0.807067 -0.1179774 0.95419247 2.1910e-02 weaklyHypometh 1.00000 5.1237e-01 insignificant 0.9671872 0.00364699 weaklyHypometh 1 0.36470 insignificant -0.05217745 0.1668602 insignificant 1.00000 insignificant 0.764085 0.4180119 0.35938432 10 0.751734 0.291696 0.46003761 3.0903e-39 1.0000e+00 hypermethylated 2.0602e-37 1.0000e+00 hypermethylated 3.5586e-11 9.9999e-01 hypermethylated 2.3724e-09 1.0000e+00 hypermethylated 3.6903e-01 5.6552e-06 hypermethylated 2.8276e-04 hypermethylated 0.764232 0.8238583 -0.06044751 9 0.776907 0.829297 -0.05238969 9.8184e-01 7.4214e-03 weaklyHypometh 1.0000e+00 1.9530e-01 insignificant 9.8137e-01 3.9104e-03 weaklyHypometh 1.0000e+00 1.3966e-01 insignificant -8.3683e-02 3.6891e-02 weaklyHypometh 4.4447e-01 insignificant 0.792033 0.4173028 0.40030530 10 0.802677 0.246820 0.55585707 3.5722e-35 1.0000e+00 hypermethylated 3.2474e-33 1.0000e+00 hypermethylated 2.3617e-11 1.0000e+00 hypermethylated 2.3617e-09 1.0000e+00 hypermethylated 4.2121e-01 3.3833e-06 hypermethylated 1.8796e-04 hypermethylated 0.791818 0.8232558 -0.02400936 9 0.786234 0.774414 0.01181928 9.7614e-01 3.5511e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.1015e-01 4.5292e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03150598 3.8097e-01 insignificant 1.0000e+00 insignificant 0.4180119 0.8230912 -0.42324689 9 0.291696 0.753907 -0.4622101 1.0000e+00 4.2017e-23 hypomethylated 1.0000e+00 5.9106e-21 hypomethylated 1.0000e+00 8.4467e-08 hypomethylated 1.0000e+00 5.6311e-06 hypomethylated -0.4527181 5.1656e-06 hypomethylated 0.00103312 hypomethylated chr21 42044950 42045950 56025 ENSG00000207503 0.7147655 366 9 0.382892 265 10 0.553030 186 9 0.6734333 268 9 0.6045695 69 6 0.775960 252 8 0.609918 80 7 0.4922823 195 8 0.5696072 121 7 0.6940687 203 7 0.679298 343 9 0.876190 50 3 0.6527190 211 7 0.587161 118 6 0.526701 176 6 0.8233333 24 1 0.2500000 4 0 0.5295822 650 9 0.664917 405 9 0.758003 248 7 0.700694 57 5 0.5922911 102 6 0.626268 212 9 0.818939 69 6 0.5564123 80 6 0.6637953 343 9 0.500340 186 6 0.3413534 54 3 0.784788 284 9 0.5853109 466 9 0.687759 450 9 0.828039 341 9 0.2325712 392 10 0.3819999 434 9 0.1379310 580 10 0.1339286 16 1 0.2415554 295 10 0.0608022 591 10 0.683991 351 9 0.6289588 415 9 0.7405783 237 9 0.5942050 354 9 0.662176 270 9 0.7837304 0.424451 0.488274 0.7524485 0.5501309 0.8541598 0.4479417 0.6466136 0.6777848 0.7443918 0.769144 0.739906 0.6241129 0.545107 0.5625125 0.6939678 NA 0.5417287 0.7612270 0.747439 0.879541 0.52738745 0.6652393 0.8934495 0.55786803 0.6683119 0.6661412 0.5461498 0.787058 0.621613 0.6800246 0.815195 0.2604749 0.5516163 0.1856287 0.1626690 0.5160705 0.0182551 0.7161916 0.5508246 0.6656325 0.4995781 0.6929572 4 0.672809 0.708223 -2.7564e-02 9 0.550604 0.531524 0.0190800 0.97532946 6.7503e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9986244 0.35859388 insignificant 1 1.00000 insignificant -0.01957758 0.7102815 insignificant 1.00000 insignificant 0.672809 0.1258134 0.51358809 9 0.550604 0.172429 0.37817437 4.6141e-36 1.0000e+00 hypermethylated 2.5634e-34 1.0000e+00 hypermethylated 1.4149e-11 1.0000e+00 hypermethylated 1.0107e-09 1.0000e+00 hypermethylated 4.2279e-01 1.4714e-05 hypermethylated 5.4497e-04 hypermethylated 0.673286 0.6803934 0.02074219 9 0.596488 0.597045 -0.00055796 5.2139e-01 8.1575e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.2287e-01 7.7799e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -4.1060e-02 3.3138e-01 insignificant 1.0000e+00 insignificant 0.707151 0.1257589 0.55060016 9 0.493558 0.160113 0.33344481 4.7289e-30 1.0000e+00 hypermethylated 2.7817e-28 1.0000e+00 hypermethylated 2.4082e-09 1.0000e+00 hypermethylated 1.3379e-07 1.0000e+00 hypermethylated 4.4237e-01 8.9365e-06 hypermethylated 4.0620e-04 hypermethylated 0.708760 0.6803934 0.03914476 9 0.575818 0.597045 -0.02122792 3.9805e-01 8.3921e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.8729e-01 9.6106e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02148273 6.5737e-01 insignificant 1.0000e+00 insignificant 0.1259774 0.6808118 -0.54894514 9 0.203780 0.651322 -0.4475420 1.0000e+00 1.1818e-27 hypomethylated 1.0000e+00 5.9090e-25 hypomethylated 9.9998e-01 3.7219e-08 hypomethylated 1.0000e+00 3.3836e-06 hypomethylated -0.4638505 2.9795e-05 hypomethylated 0.00212819 hypomethylated chr21 42128950 42129950 56031 RIPK4 ENSG00000183421 0.8924556 708 14 0.795920 526 14 0.910467 503 14 0.9629517 693 14 0.7811128 341 14 0.917072 792 14 0.840101 375 14 0.8025645 613 14 0.9208528 369 14 0.8855574 446 14 0.870643 598 14 0.888349 210 14 0.8070543 561 14 0.900684 231 14 0.831261 446 14 0.7402211 129 13 0.9000000 10 0 0.9467184 777 14 0.880353 960 14 0.786293 484 14 0.835074 258 14 0.9182019 196 11 0.817224 385 14 0.870806 258 14 0.9726734 230 13 0.9310432 791 14 0.880380 391 14 0.7814103 152 14 0.906681 781 14 0.8765963 735 15 0.830373 653 15 0.933253 540 14 0.9281789 419 14 0.9553190 492 14 0.8098958 167 6 0.8708333 70 8 0.8632153 298 14 0.8783414 771 15 0.954424 663 14 0.9109634 615 14 0.8993747 662 14 0.9418608 475 14 0.934873 604 14 0.9102549 0.856724 0.916235 0.9580349 0.8247487 0.9176077 0.8632578 0.9039618 0.9049197 0.8906291 0.912546 0.863807 0.8753616 0.906294 0.8977587 0.7502059 0.9644251 0.9382500 0.8816906 0.885074 0.856572 0.92069682 0.7936754 0.9263690 0.97360464 0.9495732 0.8956573 0.8527848 0.912299 0.903213 0.8614891 0.915122 0.9093193 0.9483324 0.9734593 0.9128246 0.9575476 0.9416537 0.9494727 0.9246613 0.9236041 0.9575121 0.9200528 14 0.897134 0.906361 -9.9467e-03 14 0.833537 0.875211 -0.0416734 0.99730072 1.0747e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9997869 0.20489706 insignificant 1 1.00000 insignificant -0.01644481 0.4445623 insignificant 1.00000 insignificant 0.897205 0.9309878 -0.03973971 14 0.807232 0.871576 -0.06434429 9.9994e-01 8.2420e-07 weaklyHypometh 1.0000e+00 5.4947e-05 weaklyHypometh 1.0000e+00 2.7460e-07 weaklyHypometh 1.0000e+00 2.2883e-05 weaklyHypometh -2.1266e-02 4.1587e-01 insignificant 1.0000e+00 insignificant 0.897276 0.9337529 -0.03799508 14 0.837264 0.934267 -0.09700370 1.0000e+00 1.4286e-04 weaklyHypometh 1.0000e+00 9.8765e-03 weaklyHypometh 1.0000e+00 1.2818e-04 weaklyHypometh 1.0000e+00 1.2818e-02 weaklyHypometh -6.5268e-02 1.1356e-03 weaklyHypometh 5.4075e-02 weaklyHypometh 0.906647 0.9318284 -0.03179363 14 0.898382 0.919997 -0.02161518 9.9687e-01 2.3683e-03 weaklyHypometh 1.0000e+00 1.1842e-01 insignificant 9.9673e-01 5.8347e-03 weaklyHypometh 1.0000e+00 3.8898e-01 insignificant -4.8210e-03 8.5872e-01 insignificant 1.0000e+00 insignificant 0.906408 0.9337529 -0.02810861 14 0.870604 0.934267 -0.06366287 9.9988e-01 3.4947e-02 weaklyHypometh 1.0000e+00 7.6424e-01 insignificant 9.9987e-01 1.0362e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04882286 2.1700e-02 weaklyHypometh 4.3401e-01 insignificant 0.9317977 0.9337309 -0.00042242 14 0.915291 0.930401 -0.0151093 2.2288e-02 9.3500e-01 inconclusive 6.7171e-01 1.0000e+00 insignificant 7.3157e-02 9.9505e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0440019 9.9763e-02 insignificant 0.61204044 insignificant chr21 42187850 42188850 56034 ENSG00000215494 0.8314919 719 10 0.719286 629 10 0.875936 169 8 0.8146659 583 10 0.7636443 142 10 0.796307 722 10 0.771968 195 10 0.8381556 201 8 0.8383394 150 8 0.8871528 75 6 0.901090 461 10 0.668571 79 7 0.7905499 125 8 0.738590 65 5 0.877997 146 7 0.7777778 95 6 0.7187500 61 4 0.6867151 617 8 0.840750 484 8 0.863819 440 10 0.889277 95 8 0.8312500 51 4 0.885407 285 10 0.870221 170 9 0.7941140 290 8 0.8590564 620 10 0.835912 131 8 0.7984127 91 7 0.851941 426 10 0.7923810 525 10 0.831045 644 10 0.821217 461 10 0.7892149 416 10 0.7466663 236 10 0.7708588 586 6 0.7335027 223 9 0.7777666 279 10 0.6647805 532 10 0.828382 642 10 0.6677529 524 10 0.7237178 713 10 0.6597277 576 8 0.728650 572 10 0.8718109 0.804387 0.874588 0.8692086 0.8338049 0.8260764 0.8333883 0.8558016 0.8613511 0.9237141 0.913911 0.733701 0.8184028 0.822443 0.8703689 0.9499247 0.8519138 0.7823475 0.8911799 0.878285 0.898250 0.88857567 0.8997074 0.8891449 0.84649413 0.8918232 0.8899205 0.8827469 0.894838 0.843744 0.8632294 0.874804 0.8407255 0.8574391 0.8547917 0.8435275 0.8444628 0.7875735 0.8612471 0.7722230 0.7636774 0.6731134 0.7977547 5 0.861806 0.887833 -2.6347e-02 10 0.825178 0.857274 -0.0320963 0.99898881 1.4251e-02 weaklyHypometh 1.00000 4.3623e-01 insignificant 0.8559863 0.17135716 insignificant 1 1.00000 insignificant -0.03827482 0.0436895 weaklyHypometh 1.00000 insignificant 0.861761 0.8380282 -0.00704298 10 0.807696 0.748105 0.05959135 5.7669e-03 8.6523e-04 weaklyHypometh 3.2954e-02 3.9328e-02 weaklyHypometh 7.8755e-02 6.0602e-02 insignificant 4.4747e-01 1.0000e+00 insignificant 5.2946e-02 4.6518e-02 weaklyHypermeth 3.3466e-01 insignificant 0.861761 0.8024447 0.07428414 10 0.807696 0.721861 0.08583509 5.3907e-05 9.9998e-01 weaklyHypermeth 1.3477e-03 1.0000e+00 weaklyHypermeth 4.9964e-04 9.9999e-01 weaklyHypermeth 1.5614e-02 1.0000e+00 weaklyHypermeth 7.8432e-02 5.7869e-02 insignificant 5.7296e-01 insignificant 0.887804 0.8380282 0.02493954 10 0.843002 0.748105 0.09489728 2.9279e-06 5.8434e-02 weaklyHypermeth 3.1483e-05 1.0000e+00 weaklyHypermeth 2.6926e-02 1.9011e-01 weaklyHypermeth 1.7042e-01 1.0000e+00 insignificant 9.1221e-02 2.4701e-03 weaklyHypermeth 3.1267e-02 weaklyHypermeth 0.887804 0.8024447 0.10218109 10 0.843002 0.721861 0.12114102 1.0015e-09 1.0000e+00 weaklyHypermeth 8.3461e-08 1.0000e+00 weaklyHypermeth 3.4539e-06 9.9999e-01 weaklyHypermeth 3.8365e-04 1.0000e+00 weaklyHypermeth 0.11670653 1.4995e-02 weaklyHypermeth 3.4203e-01 insignificant 0.8380282 0.8024447 0.05200991 10 0.748105 0.721861 0.0262437 6.2858e-06 5.7124e-01 weaklyHypermeth 5.7143e-04 1.0000e+00 weaklyHypermeth 5.1043e-04 7.6308e-01 weaklyHypermeth 5.1043e-02 1.0000e+00 weaklyHypermeth 0.0254854 4.9513e-01 insignificant 1.00000000 insignificant chr21 42244350 42245350 56037 C2CD2 ENSG00000157617 0.4000000 64 1 0.317125 62 5 0.305556 19 1 0.2876344 125 5 0.2972222 44 5 0.107692 68 1 0.302134 65 5 0.2366013 89 5 0.2666667 28 2 0.1200000 9 1 0.535086 119 6 0.100000 6 0 0.0333333 14 1 0.416667 9 0 0.680000 17 1 1.0000000 8 1 NA 0 0 0.4687500 72 1 0.120000 25 1 0.052174 58 1 0.633333 22 3 0.9333333 13 0 0.054545 30 1 0.182418 44 6 0.3758044 75 5 0.2358669 87 5 0.168141 52 5 0.3333333 12 1 0.444444 27 1 0.0818733 105 5 0.318474 117 6 0.400000 60 5 0.8234127 60 2 0.9682540 31 1 1.0000000 4 0 0.6740741 63 5 0.6077244 74 6 0.9080969 103 5 0.228846 124 5 0.4433761 101 5 0.1333333 105 5 0.1034483 29 1 0.336415 128 5 0.4687500 0.240057 0.031250 0.3482863 0.3585069 0.4038462 0.1890851 0.3970588 0.3875000 0.5625000 0.350250 0.468750 0.1562500 0.031250 0.4375000 0.9527969 NA 0.3222656 0.1277969 0.244565 0.662500 1.00000000 0.2556818 0.0846154 0.29954955 0.1861264 0.0857143 0.0000000 0.437572 0.163662 0.1514242 0.500000 0.7098214 0.8214286 0.5689151 0.6250000 0.1063218 0.5611702 0.3659856 0.5564904 0.3177083 0.1100510 0.2535591 0 0.341842 0.273292 7.2104e-02 2 0.363217 0.316352 0.0468646 0.16809250 9.5471e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.7880935 0.31802777 lowCoverage 1 1.00000 lowCoverage -0.02855299 0.7527899 lowCoverage 1.00000 lowCoverage 0.341491 0.6805970 -0.32381535 2 0.340420 0.769149 -0.42872904 1.0000e+00 8.5709e-13 lowCoverage 1.0000e+00 7.1424e-11 lowCoverage 1.0000e+00 5.4719e-09 lowCoverage 1.0000e+00 6.0798e-07 lowCoverage -5.1202e-01 4.7702e-05 lowCoverage 1.4455e-03 lowCoverage 0.341491 0.2936345 0.04481169 2 0.340420 0.319060 0.02136000 2.9508e-01 7.0011e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.8324e-01 1.8498e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 6.9161e-02 4.2599e-01 lowCoverage 1.0000e+00 lowCoverage 0.271875 0.6805970 -0.40670181 5 0.285744 0.769149 -0.48340437 1.0000e+00 2.2945e-15 hypomethylated 1.0000e+00 3.2779e-13 hypomethylated 1.0000e+00 2.6775e-08 hypomethylated 1.0000e+00 3.8250e-06 hypomethylated -4.8346e-01 1.6969e-04 lowCoverage 3.6890e-03 lowCoverage 0.271875 0.2936345 -0.01829573 5 0.285744 0.319060 -0.03331533 4.5269e-01 2.3283e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.5917e-01 4.1795e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.09771350 3.2378e-01 lowCoverage 1.0000e+00 lowCoverage 0.6805970 0.2936345 0.38534745 5 0.769149 0.319060 0.4500890 1.3209e-09 1.0000e+00 hypermethylated 2.2016e-07 1.0000e+00 hypermethylated 7.0150e-06 1.0000e+00 hypermethylated 1.1692e-03 1.0000e+00 hypermethylated 0.5811766 1.3117e-04 lowCoverage 0.00576548 lowCoverage chr21 42340850 42341850 56042 ZNF295 ENSG00000173276 0.8978115 280 7 0.600063 169 5 0.730629 130 7 0.9093961 315 7 0.9157656 93 7 0.914568 403 7 0.906746 114 5 0.8293484 147 7 0.9418986 146 7 0.9606227 128 7 0.946802 178 7 0.944444 44 3 0.9642358 149 5 0.980235 78 3 0.880210 152 7 1.0000000 7 0 0.9408602 104 3 0.6227499 374 7 0.935639 125 7 0.899221 318 7 0.952381 54 7 0.7442614 95 7 0.876623 182 7 0.795759 67 5 0.8689990 274 7 0.8440964 189 7 0.873299 73 7 0.9022436 72 7 0.838729 166 7 0.9731503 204 7 0.901037 244 7 0.821988 272 7 0.6414478 236 7 0.4400622 156 7 0.5285714 105 4 0.6452893 142 4 0.3887566 136 7 0.4586626 308 7 0.929736 378 7 0.9027441 210 7 0.8388122 223 7 0.9157087 221 7 0.820888 258 7 0.8890398 0.761212 0.846270 0.8909729 0.9049526 0.9093528 0.8780163 0.8464021 0.9162403 0.9271562 0.950093 0.911164 0.9510810 0.956150 0.8445232 0.9578405 0.9242791 0.5904013 0.9227593 0.890688 0.952862 0.87117539 0.9016573 0.9273088 0.85180607 0.8364775 0.8529221 0.9347319 0.851552 0.970902 0.9104796 0.920351 0.6924286 0.4392691 0.6208906 0.7628797 0.6732995 0.4343237 0.9332047 0.9269553 0.8578423 0.9247088 0.8378150 3 0.869137 0.895822 -2.9380e-02 7 0.795974 0.823080 -0.0271062 0.97467543 2.6886e-01 insignificant 1.00000 1.0000e+00 insignificant 0.7549457 0.75026819 insignificant 1 1.00000 insignificant 0.02001513 0.5199065 insignificant 1.00000 insignificant 0.869389 0.4963031 0.32529479 7 0.875571 0.371070 0.50450108 2.4716e-20 1.0000e+00 hypermethylated 7.4898e-19 1.0000e+00 hypermethylated 3.5897e-06 1.0000e+00 hypermethylated 6.5267e-05 1.0000e+00 hypermethylated 3.6893e-01 6.2668e-05 hypermethylated 1.6069e-03 hypermethylated 0.869200 0.8984496 -0.03119098 7 0.761131 0.896691 -0.13555959 8.7262e-01 3.8570e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.5470e-01 4.4823e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.4846e-03 8.9318e-01 insignificant 1.0000e+00 insignificant 0.897667 0.4958449 0.36448099 7 0.883686 0.337337 0.54634959 2.3794e-24 1.0000e+00 hypermethylated 1.0033e-22 1.0000e+00 hypermethylated 2.4671e-05 1.0000e+00 hypermethylated 4.6011e-04 1.0000e+00 hypermethylated 3.4892e-01 1.8135e-04 hypermethylated 3.8586e-03 hypermethylated 0.896131 0.8984496 0.00550211 7 0.819235 0.896691 -0.07745526 6.0514e-01 4.6503e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.2885e-01 6.6856e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01553057 5.9731e-01 insignificant 1.0000e+00 insignificant 0.4986072 0.8983708 -0.35629134 7 0.530101 0.881932 -0.3518316 1.0000e+00 1.6784e-16 hypomethylated 1.0000e+00 1.1190e-14 hypomethylated 9.9975e-01 2.9442e-04 hypomethylated 1.0000e+00 6.1338e-03 hypomethylated -0.3644461 1.2495e-04 hypomethylated 0.00576548 hypomethylated chr21 42527450 42528450 56050 ENSG00000210025 0.0718460 1540 47 0.058382 1636 47 0.074350 1634 47 0.0639132 1593 39 0.0528524 1300 47 0.141240 2163 47 0.057430 1839 47 0.0811847 1340 47 0.0356972 1533 47 0.0768491 1436 47 0.074855 1527 46 0.070599 1366 48 0.0501774 1442 45 0.070502 734 35 0.045421 1711 47 0.0947135 1308 44 0.0227596 772 26 0.0631859 2138 44 0.058973 1531 46 0.071847 1770 47 0.124060 584 37 0.0524172 633 25 0.074448 1150 48 0.051415 897 44 0.0836074 654 35 0.0565176 2249 47 0.062174 1587 36 0.0389506 769 39 0.066173 1498 43 0.0510812 2163 47 0.026928 2182 47 0.064622 1789 47 0.0445040 1021 46 0.0562695 1356 46 0.0983852 967 31 0.0764465 324 15 0.0900899 941 42 0.0501850 2191 48 0.041372 2569 46 0.0573638 2112 48 0.0296520 1502 42 0.0265873 2169 39 0.054808 2163 39 0.0297837 0.025292 0.043116 0.0206173 0.0326680 0.0737310 0.0441574 0.0465210 0.0305144 0.0354332 0.052860 0.056072 0.0135141 0.041759 0.0368172 0.0591605 0.0318589 0.0285059 0.0268754 0.029368 0.067496 0.01853969 0.0526173 0.0394499 0.02772730 0.0262711 0.0344784 0.0226931 0.033105 0.018340 0.0187726 0.049884 0.0267693 0.0191644 0.0725750 0.0214669 0.0616951 0.0246130 0.0142154 0.0163648 0.0118249 0.0160316 0.0271868 29 0.047198 0.039750 9.0119e-03 46 0.093707 0.064221 0.0294854 0.00383895 9.9989e-01 weaklyHypermeth 0.54842 1.0000e+00 insignificant 0.0066987 0.99999162 weaklyHypermeth 1 1.00000 insignificant 0.00413940 0.6452911 insignificant 1.00000 insignificant 0.047136 0.0454746 0.00554008 46 0.083354 0.064892 0.01846117 5.9231e-03 5.7980e-01 weaklyHypermeth 3.3654e-02 1.0000e+00 weaklyHypermeth 1.6017e-04 9.9791e-01 weaklyHypermeth 2.0680e-03 1.0000e+00 weaklyHypermeth -2.4745e-03 8.1996e-01 insignificant 1.0000e+00 insignificant 0.047102 0.0229196 0.02310200 42 0.084845 0.045112 0.03973263 2.2299e-07 1.0000e+00 weaklyHypermeth 9.6951e-06 1.0000e+00 weaklyHypermeth 9.3033e-08 1.0000e+00 weaklyHypermeth 9.3033e-06 1.0000e+00 weaklyHypermeth 2.4882e-02 1.2127e-02 weaklyHypermeth 2.3321e-01 insignificant 0.039594 0.0453608 -0.00341682 46 0.062316 0.061609 0.00070664 2.8315e-01 5.5199e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.2616e-01 9.2534e-01 insignificant 6.3718e-01 1.0000e+00 insignificant -6.6139e-03 5.7736e-01 insignificant 1.0000e+00 insignificant 0.039386 0.0228354 0.01703993 40 0.051486 0.040610 0.01087637 1.3397e-02 9.9996e-01 weaklyHypermeth 1.5398e-01 1.0000e+00 insignificant 1.4071e-02 1.0000e+00 weaklyHypermeth 2.4261e-01 1.0000e+00 insignificant 0.02074283 4.7247e-02 weaklyHypermeth 6.6545e-01 insignificant 0.0454613 0.0229218 0.01369594 40 0.071875 0.045932 0.0259426 5.7460e-01 9.6573e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.4012e-01 9.9872e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0273567 3.6751e-02 weaklyHypermeth 0.31207887 insignificant chr21 42886250 42887250 56066 SLC37A1 ENSG00000160190 0.3238721 499 17 0.145443 584 17 0.217859 637 17 0.3225979 482 19 0.2307697 482 15 0.324897 608 18 0.196279 654 15 0.2501952 489 16 0.2230808 675 15 0.2001796 564 12 0.338132 564 16 0.155586 603 15 0.2192149 607 16 0.373581 250 10 0.265336 597 15 0.2474528 542 17 0.0866915 421 11 0.2479283 754 16 0.435204 459 16 0.281935 448 18 0.324468 225 16 0.2989740 309 11 0.284364 381 17 0.218693 165 12 0.3348585 269 10 0.3526625 827 18 0.233424 312 16 0.2554655 238 13 0.237590 503 16 0.3305985 741 18 0.381772 657 18 0.389974 636 17 0.0777203 622 18 0.1158978 395 14 0.3134896 307 20 0.2354497 134 9 0.0933073 406 15 0.1887027 627 21 0.264767 585 17 0.3637322 433 15 0.2760070 594 15 0.1719702 550 13 0.281647 502 17 0.2096633 0.108644 0.200860 0.1615912 0.1740515 0.2569579 0.1525039 0.1911121 0.1364563 0.1766948 0.233317 0.181767 0.1397423 0.168437 0.1839358 0.1643697 0.1324694 0.1937035 0.2054741 0.262054 0.269605 0.17708710 0.2794097 0.2011557 0.23666242 0.2080949 0.2159415 0.1770368 0.168215 0.143490 0.2025919 0.317354 0.0555168 0.0664839 0.2548415 0.0684788 0.0725085 0.0583272 0.1408152 0.2394325 0.1520742 0.1470035 0.1435561 6 0.167705 0.209926 -2.3296e-02 18 0.334525 0.333684 0.0008414 0.99964532 1.3659e-02 weaklyHypometh 1.00000 4.3623e-01 insignificant 0.9998399 0.03998738 weaklyHypometh 1 0.99968 insignificant -0.04925869 0.0581265 insignificant 1.00000 insignificant 0.167660 0.1216867 0.11866844 18 0.293007 0.171896 0.12111166 3.2220e-18 1.0000e+00 weaklyHypermeth 7.3228e-17 1.0000e+00 weaklyHypermeth 5.1641e-10 1.0000e+00 weaklyHypermeth 2.3473e-08 1.0000e+00 weaklyHypermeth 8.3550e-02 8.3501e-02 insignificant 5.3526e-01 insignificant 0.167952 0.2516905 0.03521457 16 0.349225 0.251791 0.09743418 2.1298e-06 9.9468e-01 weaklyHypermeth 7.1929e-05 1.0000e+00 weaklyHypermeth 3.4166e-05 9.9921e-01 weaklyHypermeth 1.7982e-03 1.0000e+00 weaklyHypermeth -1.7313e-02 6.4140e-01 insignificant 1.0000e+00 insignificant 0.209444 0.1216867 0.13200963 18 0.312894 0.171896 0.14099841 4.9294e-17 1.0000e+00 weaklyHypermeth 1.5405e-15 1.0000e+00 weaklyHypermeth 1.9454e-10 1.0000e+00 weaklyHypermeth 1.2159e-08 1.0000e+00 weaklyHypermeth 1.3281e-01 1.4464e-02 weaklyHypermeth 1.3908e-01 insignificant 0.209834 0.2516905 0.06298523 16 0.339542 0.251791 0.08775080 1.7662e-06 9.9998e-01 weaklyHypermeth 8.4104e-05 1.0000e+00 weaklyHypermeth 3.8365e-06 1.0000e+00 weaklyHypermeth 3.8365e-04 1.0000e+00 weaklyHypermeth 0.03194583 3.9116e-01 insignificant 1.0000e+00 insignificant 0.1217846 0.2517850 -0.09837016 16 0.179370 0.251791 -0.0724215 9.4812e-01 1.2969e-03 weaklyHypometh 1.0000e+00 1.2352e-02 weaklyHypometh 9.6567e-01 1.3730e-02 weaklyHypometh 1.0000e+00 1.2151e-01 insignificant -0.1008633 6.7353e-02 insignificant 0.49214199 insignificant chr21 43233850 43234850 56072 ENSG00000196847 0.6085165 364 12 0.547806 259 9 0.582987 174 9 0.6514848 277 12 0.6310793 95 5 0.644213 487 12 0.583256 160 9 0.7025847 228 9 0.4895537 161 8 0.7638197 126 9 0.674005 339 9 0.666667 82 5 0.7667976 144 9 0.889785 47 2 0.577165 133 9 0.5772792 84 4 0.5661367 189 7 0.6324413 280 11 0.644192 241 11 0.711942 438 12 0.707204 117 8 0.6431457 85 6 0.579385 266 12 0.820729 117 8 0.6819108 77 7 0.7538188 326 12 0.530727 110 8 0.6372727 77 5 0.622538 235 9 0.7059301 393 12 0.685081 369 12 0.708419 490 12 0.6726883 223 9 0.6945843 105 9 0.5311422 248 10 0.6083304 145 7 0.5332852 138 9 0.6148508 396 12 0.750011 337 11 0.6170707 360 12 0.7245418 311 12 0.6437141 243 8 0.598024 429 12 0.7774626 0.676913 0.631969 0.7543481 0.7533412 0.7646234 0.6318503 0.7040332 0.6107210 0.8222426 0.712573 0.717509 0.8243800 0.774221 0.7320870 0.6827617 0.7090484 0.7232743 0.7454205 0.738038 0.766017 0.74754091 0.7143979 0.7929535 0.65633684 0.8408279 0.7016883 0.7010010 0.778489 0.787148 0.7236654 0.757618 0.7035622 0.6728017 0.6480800 0.7132240 0.6262707 0.6753606 0.8012034 0.7989362 0.7999971 0.7961446 0.7158884 4 0.684699 0.740045 -3.6399e-02 9 0.606043 0.663211 -0.0571677 0.99951943 2.0901e-02 weaklyHypometh 1.00000 5.0977e-01 insignificant 0.9987914 0.05839841 insignificant 1 1.00000 insignificant -0.02742778 0.3715120 insignificant 1.00000 insignificant 0.684699 0.6318725 0.04200220 9 0.606043 0.600500 0.00554264 8.2945e-02 9.7524e-01 insignificant 3.6063e-01 1.0000e+00 insignificant 1.3901e-01 9.8784e-01 insignificant 7.1289e-01 1.0000e+00 insignificant 3.6439e-02 3.1270e-01 insignificant 1.0000e+00 insignificant 0.684699 0.7136905 -0.05649876 9 0.606043 0.619663 -0.01362029 8.7175e-01 8.1382e-03 weaklyHypometh 1.0000e+00 2.0345e-01 insignificant 9.6971e-01 1.2916e-02 weaklyHypometh 1.0000e+00 3.3988e-01 insignificant -2.1087e-02 5.7612e-01 insignificant 1.0000e+00 insignificant 0.740045 0.6318725 0.08487682 12 0.663211 0.600500 0.06271036 3.0431e-04 9.9993e-01 weaklyHypermeth 2.4151e-03 1.0000e+00 weaklyHypermeth 6.1011e-03 9.9996e-01 weaklyHypermeth 5.0842e-02 1.0000e+00 weaklyHypermeth 6.3866e-02 9.9988e-02 insignificant 5.8311e-01 insignificant 0.740045 0.7136905 -0.01211115 12 0.663211 0.619663 0.04354743 1.8344e-01 5.5187e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.4909e-01 3.0152e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00634093 8.6923e-01 insignificant 1.0000e+00 insignificant 0.6318725 0.7136905 -0.10257692 12 0.600500 0.619663 -0.0191629 9.4000e-01 1.5259e-04 weaklyHypometh 1.0000e+00 1.8384e-03 weaklyHypometh 9.9282e-01 6.1855e-04 weaklyHypometh 1.0000e+00 1.1046e-02 weaklyHypometh -0.0575255 1.9437e-01 insignificant 0.89160408 insignificant chr21 43471150 43472150 56080 CRYAA ENSG00000160202 0.6062940 178 5 0.641870 148 5 0.616344 126 5 0.5949011 143 5 0.6470728 68 5 0.787251 241 5 0.708218 134 5 0.6514687 105 5 0.5747101 101 5 0.8047946 89 5 0.775675 195 5 0.615126 79 5 0.4762562 123 5 0.793162 43 3 0.477477 113 5 0.6356754 67 5 0.3590909 42 2 0.5202957 356 5 0.651693 211 5 0.594353 198 5 0.753712 60 5 0.3416667 17 2 0.719665 147 5 0.774203 57 5 0.7416667 37 3 0.7821248 211 5 0.637778 103 5 0.6833333 73 5 0.674260 151 5 0.6628423 173 5 0.449510 143 5 0.815659 247 5 0.2652107 135 5 0.6167357 150 5 0.2666667 156 4 0.7727273 12 1 0.5430558 125 5 0.4276190 178 5 0.393474 158 5 0.4453508 171 5 0.5646499 76 4 0.4681839 209 4 0.338338 159 4 0.6601267 0.647290 0.644579 0.6087719 0.7244334 0.8226905 0.7331568 0.6438937 0.6014613 0.8512192 0.781612 0.627268 0.4755101 0.707464 0.5357858 0.6429134 0.5748213 0.4996872 0.6343106 0.625060 0.733388 0.38561562 0.6998507 0.7675192 0.76640534 0.7467044 0.6677197 0.7350763 0.708877 0.665762 0.4566032 0.805009 0.2471742 0.6579352 0.3050109 0.4864441 0.5769573 0.3905696 0.4423310 0.4577814 0.5686732 0.4541374 0.3356261 4 0.659420 0.692037 -4.2019e-02 5 0.639828 0.695606 -0.0557781 0.92831282 1.4151e-02 weaklyHypometh 1.00000 4.3623e-01 insignificant 0.8009391 0.16075764 insignificant 1 1.00000 insignificant -0.04311524 0.3794531 lowCoverage 1.00000 lowCoverage 0.659420 0.4021164 0.25874348 5 0.639828 0.421300 0.21852815 4.7063e-06 9.7604e-01 hypermethylated 4.4399e-05 1.0000e+00 hypermethylated 1.4223e-02 9.4132e-01 weaklyHypermeth 1.0232e-01 1.0000e+00 insignificant 1.4458e-01 1.4409e-01 lowCoverage 7.6698e-01 lowCoverage 0.659420 0.4346701 0.23832303 5 0.639828 0.430585 0.20924250 1.1867e-09 9.9998e-01 hypermethylated 9.8892e-08 1.0000e+00 hypermethylated 2.5777e-05 9.9986e-01 hypermethylated 1.6110e-03 1.0000e+00 hypermethylated 1.8459e-01 3.6798e-03 lowCoverage 1.2266e-01 lowCoverage 0.692037 0.4021164 0.29091263 5 0.695606 0.421300 0.27430624 6.7875e-06 1.0000e+00 hypermethylated 6.8560e-05 1.0000e+00 hypermethylated 6.9725e-03 9.9972e-01 weaklyHypermeth 5.5780e-02 1.0000e+00 weaklyHypermeth 1.8770e-01 7.6977e-02 lowCoverage 4.8719e-01 lowCoverage 0.692037 0.4346701 0.24203479 5 0.695606 0.430585 0.26502058 1.8518e-10 9.9998e-01 hypermethylated 2.0575e-08 1.0000e+00 hypermethylated 2.6218e-05 9.9980e-01 hypermethylated 1.7008e-03 1.0000e+00 hypermethylated 0.22770227 1.3713e-03 lowCoverage 1.3916e-01 lowCoverage 0.4021164 0.4346701 -0.05251361 5 0.421300 0.430585 -0.0092857 3.3141e-01 5.1754e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.5609e-01 6.3068e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0400031 6.7204e-01 lowCoverage 1.00000000 lowCoverage chr21 43503350 43504350 56082 CRYAA ENSG00000160202 0.8847804 861 9 0.814560 369 9 0.605030 334 9 0.9339774 773 9 0.7641203 171 9 0.907609 697 9 0.870930 269 9 0.8684709 330 9 0.7695817 289 9 0.8356529 292 9 0.897145 511 9 0.830446 197 9 0.8023037 367 9 0.759760 181 7 0.800223 344 9 0.8290344 148 8 0.6049107 39 4 0.8234997 1282 9 0.931799 452 9 0.928050 604 9 0.666602 149 9 0.8046151 205 9 0.936769 304 9 0.866187 180 9 0.8681352 461 9 0.8091987 528 9 0.767795 288 9 0.8351939 150 8 0.798988 376 9 0.9391187 467 9 0.918913 464 9 0.934229 583 9 0.6129195 341 9 0.4774157 344 9 0.5319325 283 6 0.8249561 259 7 0.4365776 352 9 0.7464762 535 9 0.815887 723 9 0.8964025 631 9 0.9093485 876 9 0.8534473 864 9 0.895913 536 9 0.8902573 0.802163 0.658873 0.9322422 0.8199522 0.9167797 0.8844024 0.9456731 0.8637553 0.9037948 0.909280 0.851175 0.9098326 0.873231 0.8958620 0.8833127 0.7356124 0.7501941 0.9334363 0.923843 0.967385 0.92101397 0.9457926 0.9624525 0.84868048 0.8861110 0.8264209 0.9188359 0.869579 0.925667 0.9182084 0.934758 0.7208484 0.4561230 0.4121481 0.8851051 0.6078083 0.7695956 0.9208259 0.8983538 0.9145089 0.8569254 0.8993160 9 0.861242 0.898868 -4.0770e-02 9 0.786007 0.771387 0.0146199 0.99984351 3.3993e-03 weaklyHypometh 1.00000 2.2662e-01 insignificant 0.9946757 0.00171260 weaklyHypometh 1 0.34252 insignificant -0.02238454 0.4839906 insignificant 1.00000 insignificant 0.861395 0.6147657 0.24021760 9 0.822857 0.522551 0.30030627 1.2565e-18 1.0000e+00 hypermethylated 2.9221e-17 1.0000e+00 hypermethylated 6.9966e-09 1.0000e+00 hypermethylated 2.4126e-07 1.0000e+00 hypermethylated 2.1805e-01 1.6001e-02 weaklyHypermeth 1.4160e-01 insignificant 0.861330 0.8931129 -0.03092583 9 0.805143 0.804377 0.00076541 9.6307e-01 7.2812e-02 insignificant 1.0000e+00 9.0463e-01 insignificant 8.5699e-01 2.7748e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -5.1105e-02 7.6248e-02 insignificant 6.8078e-01 insignificant 0.898746 0.6144749 0.28563083 9 0.731503 0.479005 0.25249810 6.1044e-17 1.0000e+00 hypermethylated 1.7954e-15 1.0000e+00 hypermethylated 3.6188e-09 1.0000e+00 hypermethylated 1.6449e-07 1.0000e+00 hypermethylated 2.4043e-01 1.0252e-02 weaklyHypermeth 1.0569e-01 insignificant 0.899156 0.8931129 0.01280074 9 0.827803 0.804377 0.02342624 3.4635e-01 7.8884e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.0672e-02 9.9236e-01 insignificant 8.8650e-01 1.0000e+00 insignificant -0.02872090 3.4525e-01 insignificant 1.0000e+00 insignificant 0.6156398 0.8931129 -0.27061992 9 0.574806 0.804377 -0.2295715 1.0000e+00 1.2917e-08 hypomethylated 1.0000e+00 3.4912e-07 hypomethylated 1.0000e+00 5.3865e-08 hypomethylated 1.0000e+00 4.4888e-06 hypomethylated -0.2691534 6.7433e-03 weaklyHypometh 0.09112613 weaklyHypometh chr21 43547350 43548350 56084 CRYAA ENSG00000160202 0.9328261 227 5 0.878586 159 5 0.876492 142 5 0.9565524 372 5 0.9769231 93 5 0.949232 287 5 0.905224 203 5 0.9483549 220 5 0.9198861 231 5 0.9520346 131 5 0.962593 154 5 0.880230 97 5 0.9593759 224 5 0.940215 111 5 0.912855 211 5 0.7979798 29 3 0.9259615 47 3 0.9024380 461 5 0.893981 153 5 0.927698 235 5 0.966434 65 5 0.8408910 89 5 0.953614 164 5 0.910588 65 5 0.8833333 36 4 0.9448619 145 5 0.915255 106 5 0.9509091 107 5 0.946774 228 5 0.9606582 275 5 0.939266 200 5 0.949091 288 5 0.5346943 217 5 0.3745954 173 5 0.5277778 99 2 0.7440711 84 5 0.5253001 126 5 0.5867925 232 5 0.926853 345 5 0.8899628 261 5 0.8810261 214 5 0.9025002 282 5 0.957895 374 5 0.9360403 0.875268 0.850858 0.9589699 0.9727131 0.9520262 0.9019965 0.9463700 0.9240713 0.9645490 0.967665 0.895078 0.9560416 0.938880 0.9155377 0.8376703 0.9142412 0.9018893 0.8994155 0.930825 0.970823 0.84333598 0.9491077 0.9243570 0.89029655 0.9460748 0.9280732 0.9502150 0.939536 0.960330 0.9439106 0.945953 0.5353136 0.3100472 0.3597509 0.7250227 0.5112661 0.5916854 0.9177431 0.8954569 0.8726942 0.8929426 0.9517583 5 0.925251 0.940045 -1.4031e-02 5 0.925449 0.940037 -0.0145881 0.97253969 7.5352e-02 insignificant 1.00000 9.2970e-01 insignificant 0.9737578 0.10875707 insignificant 1 1.00000 insignificant -0.01016767 0.4775401 lowCoverage 1.00000 lowCoverage 0.925251 0.5209452 0.40450938 5 0.925449 0.538267 0.38718231 6.6229e-29 1.0000e+00 hypermethylated 3.0104e-27 1.0000e+00 hypermethylated 1.6497e-08 9.9992e-01 hypermethylated 5.3215e-07 1.0000e+00 hypermethylated 3.7110e-01 4.9024e-04 lowCoverage 8.7542e-03 lowCoverage 0.925251 0.9132791 0.01376265 5 0.925449 0.917992 0.00745710 5.1639e-02 2.3971e-01 insignificant 4.9317e-01 1.0000e+00 insignificant 6.7364e-02 4.4837e-01 insignificant 7.7430e-01 1.0000e+00 insignificant 8.3245e-03 6.3157e-01 lowCoverage 1.0000e+00 lowCoverage 0.940045 0.5209452 0.42544002 5 0.940037 0.538267 0.40177041 8.3647e-20 1.0000e+00 hypermethylated 2.8844e-18 1.0000e+00 hypermethylated 1.6866e-08 9.9999e-01 hypermethylated 7.0275e-07 1.0000e+00 hypermethylated 3.8127e-01 3.9910e-04 lowCoverage 7.3907e-03 lowCoverage 0.940045 0.9132791 0.02741203 5 0.940037 0.917992 0.02204520 9.1300e-03 8.8687e-01 weaklyHypermeth 1.1000e-01 1.0000e+00 insignificant 2.6077e-02 9.4987e-01 weaklyHypermeth 3.9900e-01 1.0000e+00 insignificant 0.01849219 3.1830e-01 lowCoverage 1.0000e+00 lowCoverage 0.5209452 0.9132791 -0.39304258 5 0.538267 0.917992 -0.3797252 1.0000e+00 3.1182e-09 hypomethylated 1.0000e+00 9.7444e-08 hypomethylated 1.0000e+00 1.4026e-05 hypomethylated 1.0000e+00 5.6103e-04 hypomethylated -0.3627756 4.3424e-04 lowCoverage 0.01315872 lowCoverage chr21 43617250 43618250 56089 CRYAA ENSG00000160202 0.9228743 300 9 0.856032 239 9 0.926669 174 9 0.9154976 395 9 0.8354701 78 5 0.925323 328 9 0.949654 98 6 0.9062378 152 9 0.9325630 108 9 0.9643875 92 8 0.933761 337 9 0.981481 61 5 0.9397687 203 9 0.746044 78 5 0.874861 167 9 0.9597902 69 5 0.8333333 19 3 0.9207373 380 9 0.933231 286 9 0.940383 246 9 0.972093 78 8 0.9635058 197 9 0.940720 244 9 0.834066 105 9 0.8984244 512 9 0.9032879 271 9 0.796892 196 9 0.8148077 81 6 0.880849 177 9 0.9733883 289 9 0.943349 255 9 0.937339 315 9 0.9463047 209 9 0.8787755 275 9 0.7538288 605 9 0.8759259 79 4 0.8231541 200 9 0.9369783 279 9 0.937553 227 9 0.9552164 282 9 0.9582394 303 9 0.9089728 639 9 0.907099 219 9 0.9116671 0.847966 0.909259 0.9077491 0.9173611 0.9356127 0.9211508 0.9129142 0.9071166 0.9692308 0.937339 0.969907 0.9565298 0.896120 0.9303943 0.9412211 0.9157682 0.9303912 0.9593059 0.920623 0.982244 0.98389148 0.9469817 0.9599817 0.93689046 0.9242572 0.8661121 0.9446528 0.977905 0.966927 0.9605399 0.941432 0.9521594 0.9401441 0.8888962 0.8851852 0.8952540 0.9485062 0.9571946 0.9587585 0.9633162 0.9432659 0.9249015 5 0.922572 0.939528 -1.7383e-02 9 0.879003 0.841825 0.0371782 0.89630567 4.4263e-02 weaklyHypometh 1.00000 7.4368e-01 insignificant 0.6126763 0.00670392 weaklyHypometh 1 0.39355 insignificant 0.00501136 0.8197814 insignificant 1.00000 insignificant 0.922572 0.9089253 0.02187114 9 0.879003 0.796754 0.08224901 3.0255e-02 2.6436e-02 weaklyHypermeth 1.5596e-01 6.3806e-01 insignificant 7.1040e-01 5.5001e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 4.0744e-02 2.4448e-01 insignificant 1.0000e+00 insignificant 0.922794 0.9473054 -0.02097387 9 0.921115 0.937154 -0.01603952 9.8269e-01 3.0516e-02 weaklyHypometh 1.0000e+00 5.4494e-01 insignificant 7.1084e-01 1.9550e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -2.3511e-02 1.7582e-01 insignificant 1.0000e+00 insignificant 0.939528 0.9089253 0.03516147 9 0.841825 0.796754 0.04507078 8.9323e-02 3.5493e-01 insignificant 3.8836e-01 1.0000e+00 insignificant 3.6856e-01 4.1694e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.5732e-02 3.2748e-01 insignificant 1.0000e+00 insignificant 0.940916 0.9473054 -0.00342085 9 0.935361 0.937154 -0.00179311 7.9412e-01 4.1553e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.2939e-02 8.1936e-01 insignificant 9.6812e-01 1.0000e+00 insignificant -0.02852267 1.9265e-01 insignificant 1.0000e+00 insignificant 0.9111382 0.9473054 -0.03523213 9 0.885282 0.937154 -0.0518718 5.2923e-01 3.1641e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.3630e-01 6.6656e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0642550 8.4796e-02 insignificant 0.56815788 insignificant chr21 43695350 43696350 56092 C21orf125 ENSG00000188660 0.7474287 305 12 0.704804 174 11 0.689632 150 12 0.8845243 195 12 0.6900000 37 1 0.799128 387 13 0.369697 32 3 0.9671717 146 12 0.7371950 93 7 0.8012247 233 12 0.805127 393 14 0.589744 35 0 0.8134081 318 12 0.843157 245 12 0.860417 98 7 0.1666667 8 0 0.2187500 13 1 0.8433199 631 12 0.784111 379 13 0.837636 276 12 0.874374 138 12 0.8827574 203 11 0.837789 137 8 0.721187 103 9 0.8212777 194 11 0.8077300 322 13 0.796791 283 12 0.5389610 50 6 0.859581 323 12 0.8298372 279 11 0.851118 268 11 0.915981 295 12 0.1641252 234 11 0.3059982 415 10 0.2618524 283 15 0.0710227 78 7 0.2035929 245 12 0.2750977 473 13 0.873958 57 4 0.9355217 317 12 0.8328695 99 9 0.7638058 99 10 0.867861 144 10 0.9000305 0.673793 0.786650 0.9490045 0.7834615 0.9174501 0.6714722 0.9682984 0.8927936 0.9256303 0.913129 0.416955 0.8972083 0.910499 0.9256410 0.6558956 0.5201990 0.8846904 0.9014889 0.877148 0.866558 0.92828355 0.8519845 0.7777173 0.89040939 0.8690138 0.8428145 0.7166895 0.933233 0.929069 0.8558733 0.950140 0.1210880 0.2040084 0.3770533 0.1162587 0.1904719 0.1668535 0.8876923 0.9188868 0.9277223 0.8018372 0.8513087 1 0.882112 0.896724 -1.1092e-02 12 0.652612 0.774273 -0.1216608 0.88837448 4.4515e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9399900 0.05444876 insignificant 1 1.00000 insignificant -0.10379157 0.0742025 insignificant 1.00000 insignificant 0.886705 0.2667824 0.62812343 12 0.700731 0.210487 0.49024362 3.0912e-89 1.0000e+00 hypermethylated 3.0912e-86 1.0000e+00 hypermethylated 1.1081e-23 1.0000e+00 hypermethylated 1.1081e-20 1.0000e+00 hypermethylated 4.9404e-01 4.2238e-08 hypermethylated 3.0170e-06 hypermethylated 0.887136 0.8659218 0.02052834 10 0.778590 0.885193 -0.10660283 2.4881e-01 2.1548e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.5504e-01 3.2442e-02 inconclusive 1.0000e+00 5.5934e-01 insignificant -1.4715e-01 1.5031e-02 weaklyHypometh 2.5750e-01 insignificant 0.901550 0.2667824 0.64241570 12 0.848129 0.210487 0.63764199 7.5142e-74 1.0000e+00 hypermethylated 7.5142e-71 1.0000e+00 hypermethylated 5.3549e-24 1.0000e+00 hypermethylated 5.3549e-21 1.0000e+00 hypermethylated 5.9783e-01 2.9589e-08 hypermethylated 2.9589e-06 hypermethylated 0.901436 0.8659218 0.03286607 10 0.831255 0.885193 -0.05393798 5.1402e-01 1.3916e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.6732e-01 2.2711e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04335447 3.0076e-01 insignificant 1.0000e+00 insignificant 0.2670915 0.8659218 -0.60309379 10 0.233875 0.885193 -0.6513180 1.0000e+00 1.9685e-32 hypomethylated 1.0000e+00 1.9685e-29 hypomethylated 1.0000e+00 7.7706e-14 hypomethylated 1.0000e+00 7.7706e-11 hypomethylated -0.6411883 2.0881e-07 hypomethylated 0.00020881 hypomethylated chr21 43701050 43702050 56093 C21orf125 ENSG00000188660 0.7023025 564 12 0.671633 118 8 0.692881 175 12 0.9222662 452 12 0.8871984 84 7 0.923564 613 12 0.895926 132 9 0.8269450 262 12 0.7925002 168 9 0.8284960 126 9 0.936865 318 12 0.691204 71 3 0.6458280 181 12 0.874860 88 7 0.978190 168 12 0.9812925 87 4 0.8988095 30 1 0.6333868 681 12 0.886560 217 9 0.844578 384 12 0.786825 143 12 0.7692902 233 12 0.869652 219 12 0.752938 132 12 0.9055642 629 12 0.8614507 211 12 0.745964 149 12 0.6959877 67 1 0.647321 139 12 0.6047003 188 12 0.740250 144 12 0.929960 491 12 0.5596852 220 12 0.7057682 257 11 0.6329201 285 9 0.5556758 191 11 0.4013987 232 12 0.5874221 265 10 0.796348 362 12 0.8374567 410 12 0.8161705 455 12 0.8634790 362 12 0.800985 433 12 0.9192881 0.683056 0.726776 0.9243910 0.8807107 0.9235571 0.8816282 0.8521921 0.8449386 0.8932236 0.935043 0.773423 0.8803498 0.878820 0.9400607 0.9162714 0.7817091 0.7365166 0.8873470 0.916937 0.912831 0.78204484 0.9260982 0.9628900 0.89580115 0.9210269 0.7342710 0.9144144 0.910055 0.904504 0.8788835 0.913842 0.5061988 0.5967416 0.5646570 0.4431022 0.6013515 0.6005529 0.7787416 0.8228935 0.8070281 0.8494999 0.7673252 3 0.864672 0.880146 -2.4896e-02 12 0.630486 0.562735 0.0677509 0.99999038 6.5547e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9998226 0.68659778 insignificant 1 1.00000 insignificant 0.04993897 0.2072906 insignificant 1.00000 insignificant 0.864942 0.5238095 0.30873892 12 0.666723 0.424777 0.24194565 6.0803e-17 9.9908e-01 hypermethylated 1.3218e-15 1.0000e+00 hypermethylated 1.8631e-04 9.9649e-01 hypermethylated 2.3001e-03 1.0000e+00 hypermethylated 2.5195e-01 5.4531e-04 hypermethylated 9.4019e-03 hypermethylated 0.867130 0.8244313 0.06118464 12 0.846245 0.839434 0.00681080 1.2273e-02 9.9780e-01 weaklyHypermeth 1.4806e-01 1.0000e+00 insignificant 8.6678e-04 9.9997e-01 weaklyHypermeth 2.3426e-02 1.0000e+00 weaklyHypermeth 2.8765e-03 9.1976e-01 insignificant 1.0000e+00 insignificant 0.881109 0.5241713 0.33076272 12 0.647146 0.446016 0.20112938 1.7227e-14 9.7123e-01 hypermethylated 4.2017e-13 1.0000e+00 hypermethylated 3.8336e-05 9.7866e-01 hypermethylated 6.7636e-04 1.0000e+00 hypermethylated 2.0201e-01 2.5165e-03 weaklyHypermeth 3.1370e-02 weaklyHypermeth 0.892302 0.8244313 0.08557990 12 0.879074 0.839434 0.03963939 1.6001e-04 9.9567e-01 weaklyHypermeth 3.8098e-03 1.0000e+00 weaklyHypermeth 2.2612e-04 9.9959e-01 weaklyHypermeth 9.8314e-03 1.0000e+00 weaklyHypermeth -0.04706250 1.5891e-01 insignificant 1.0000e+00 insignificant 0.5275261 0.8244313 -0.25521909 12 0.632333 0.839434 -0.2071014 9.9347e-01 6.1439e-07 hypomethylated 1.0000e+00 1.2288e-05 hypomethylated 9.1356e-01 2.1665e-03 weaklyHypometh 1.0000e+00 2.8887e-02 weaklyHypometh -0.2490762 1.2709e-03 weaklyHypometh 0.02647804 weaklyHypometh chr21 43972750 43973750 56112 PDXK ENSG00000160209 0.0845804 879 18 0.044595 774 20 0.085385 943 20 0.0219456 968 20 0.0281926 822 20 0.061899 1464 20 0.042494 809 20 0.0825175 758 20 0.0153544 994 20 0.0350220 971 20 0.170984 979 20 0.055327 647 20 0.0129307 830 20 0.037970 644 20 0.035494 1240 20 0.0438369 560 20 0.0159064 123 7 0.0561754 1544 20 0.016806 1148 20 0.025740 1149 20 0.049877 430 19 0.0000000 473 18 0.032027 558 20 0.029992 522 21 0.0506170 400 16 0.0140256 1264 20 0.071142 1154 20 0.0202432 588 20 0.084212 1062 20 0.0098507 1292 20 0.054751 1363 20 0.233687 1057 20 0.0905399 705 20 0.3148542 906 20 0.1688034 388 15 0.0702381 158 9 0.2538796 479 21 0.0106579 1156 20 0.106161 1184 20 0.0807301 1046 20 0.0720649 825 20 0.0109480 1625 20 0.022649 959 20 0.0483820 0.018038 0.060629 0.0279406 0.0347837 0.0733927 0.0565414 0.0445107 0.0212772 0.0465086 0.064872 0.072161 0.0123938 0.052450 0.0323437 0.0568443 0.0326167 0.0518416 0.0184780 0.030584 0.059772 0.00055327 0.0334501 0.0233541 0.04518062 0.0192203 0.0282116 0.0278748 0.047174 0.013226 0.0124751 0.102390 0.1003236 0.1147190 0.2096776 0.0652980 0.2577994 0.0106337 0.0287928 0.0371134 0.0212513 0.0130409 0.0071093 19 0.040737 0.033875 9.4101e-03 20 0.073016 0.065029 0.0079878 0.11864264 9.9971e-01 insignificant 1.00000 1.0000e+00 insignificant 0.0037176 0.99997302 weaklyHypermeth 1 1.00000 insignificant -0.00554420 0.7818102 insignificant 1.00000 insignificant 0.040761 0.0768418 -0.03298985 20 0.090258 0.186949 -0.09669136 1.7178e-02 6.8076e-04 weaklyHypometh 9.1375e-02 3.2417e-02 weaklyHypometh 3.3816e-03 7.0019e-02 inconclusive 2.9925e-02 1.0000e+00 inconclusive -1.0284e-01 8.2783e-02 insignificant 5.3409e-01 insignificant 0.040632 0.0152536 0.02295086 20 0.042980 0.073433 -0.03045319 1.3318e-03 9.9467e-01 weaklyHypermeth 2.2197e-02 1.0000e+00 weaklyHypermeth 3.2438e-03 8.8867e-01 weaklyHypermeth 6.4876e-02 1.0000e+00 weaklyHypermeth -9.8528e-03 6.3727e-01 insignificant 1.0000e+00 insignificant 0.034099 0.0773291 -0.04326093 20 0.125349 0.239404 -0.11405466 8.3116e-01 5.6304e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 5.7395e-01 1.4852e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -9.7294e-02 1.0013e-01 insignificant 5.8311e-01 insignificant 0.033826 0.0152590 0.01289949 20 0.085521 0.079552 0.00596828 3.2224e-01 7.8762e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.4059e-01 6.7253e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00430859 8.6813e-01 insignificant 1.0000e+00 insignificant 0.0764146 0.0152618 0.05739771 20 0.142564 0.079552 0.0630111 3.5711e-01 2.3090e-01 insignificant 1.0000e+00 9.5807e-01 insignificant 4.0518e-01 1.0140e-01 insignificant 1.0000e+00 5.8612e-01 insignificant 0.0929849 1.1389e-01 insignificant 0.65536251 insignificant chr21 43977450 43978450 56113 ENSG00000215465 0.7674023 98 6 0.523261 111 4 0.667248 174 5 0.7993770 102 4 0.6350709 100 5 0.807046 187 6 0.672569 108 6 0.6899096 118 4 0.6863083 139 5 0.7529412 128 5 0.754238 173 4 0.565079 52 4 0.5513283 139 5 0.756878 63 4 0.653793 64 4 0.8030303 47 3 0.5500000 14 1 0.6246115 138 4 0.696736 150 4 0.742333 146 6 0.742596 61 4 0.7018442 77 4 0.782011 88 4 0.599713 81 4 0.7807815 56 4 0.8896443 134 5 0.657632 222 6 0.4798711 112 5 0.752466 132 4 0.7309285 167 5 0.662037 146 5 0.860238 159 5 0.1984887 170 5 0.0000000 88 4 0.3970861 168 4 0.0000000 10 1 0.2416940 156 5 0.3253384 202 4 0.828133 104 5 0.7021849 74 4 0.8717087 80 4 0.8398496 48 4 0.706275 74 4 0.8581177 0.778398 0.693167 0.8974102 0.8985293 0.9188661 0.8137229 0.8667985 0.8471742 0.9013688 0.894613 0.841195 0.8169650 0.817910 0.8579379 0.9391081 0.6332078 0.6444787 0.9127501 0.888757 0.755963 0.78749915 0.9247791 0.9454565 0.71411483 0.9014509 0.7374722 0.8184892 0.814529 0.861823 0.7759621 0.928485 0.0447044 0.0000000 0.2964591 0.0000000 0.2339163 0.0644499 0.8563992 0.7896609 0.8166769 0.7981983 0.8192519 4 0.815193 0.818689 1.4270e-03 5 0.581480 0.505646 0.0758341 0.94082290 5.6074e-01 insignificant 1.00000 1.0000e+00 insignificant 0.7526798 0.82349281 insignificant 1 1.00000 insignificant -0.03502208 0.3670785 lowCoverage 1.00000 lowCoverage 0.815029 0.1763224 0.64501816 5 0.539628 0.197831 0.34179777 4.3000e-32 9.9955e-01 hypermethylated 2.2632e-30 1.0000e+00 hypermethylated 3.5557e-08 9.9998e-01 hypermethylated 1.0458e-06 1.0000e+00 hypermethylated 4.9119e-01 4.5714e-04 lowCoverage 8.3117e-03 lowCoverage 0.819525 0.8157895 0.00185206 4 0.715342 0.739271 -0.02392931 6.0440e-01 5.6101e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 3.6869e-01 5.9305e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -1.0467e-01 3.8341e-02 lowCoverage 4.4765e-01 lowCoverage 0.819832 0.1763224 0.64417793 5 0.556211 0.197831 0.35838029 1.4444e-24 9.9997e-01 hypermethylated 6.5656e-23 1.0000e+00 hypermethylated 1.1721e-07 1.0000e+00 hypermethylated 3.7811e-06 1.0000e+00 hypermethylated 5.2621e-01 1.5818e-04 lowCoverage 3.5949e-03 lowCoverage 0.826638 0.8157895 -0.00078917 4 0.776730 0.739271 0.03745843 2.6250e-01 6.7060e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 6.0881e-01 6.2884e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.06964999 1.7587e-01 lowCoverage 1.0000e+00 lowCoverage 0.1766201 0.8157895 -0.66253346 4 0.246901 0.739271 -0.4923706 9.9964e-01 8.4308e-15 lowCoverage 1.0000e+00 4.4373e-13 lowCoverage 1.0000e+00 5.5848e-06 lowCoverage 1.0000e+00 2.5385e-04 lowCoverage -0.5958622 7.5224e-05 lowCoverage 0.00417914 lowCoverage chr21 43981650 43982650 56114 ENSG00000215465 0.9014287 270 11 0.942332 201 11 0.875641 172 9 0.9724483 194 4 0.7689481 141 7 0.856969 260 8 0.881481 95 7 0.8326612 180 11 0.6998668 133 8 0.8723829 195 8 0.888392 394 13 0.987013 77 7 0.7986742 164 8 0.784375 74 3 0.864127 153 8 0.7500000 22 2 0.9214286 28 3 0.7396129 426 6 0.898532 485 12 0.960271 283 10 0.749249 179 8 0.6756944 149 3 0.875499 146 9 0.761172 103 8 0.8451538 272 9 0.7551963 313 12 0.891180 234 9 0.7777778 57 5 0.878969 284 9 0.8657373 252 8 0.833574 308 7 0.928106 227 10 0.8041270 225 12 0.9230419 345 12 0.9091210 383 13 0.8181818 96 6 0.6081036 114 10 0.8850531 260 5 0.919325 165 7 0.9184655 177 5 0.7569907 124 3 0.9281136 177 3 0.885239 139 4 0.9495953 0.952426 0.889640 0.9452675 0.8199119 0.9369254 0.9794795 0.9242703 0.9303129 0.9467177 0.907233 0.996782 0.8982733 0.909227 0.8957646 0.5396794 0.9033108 0.8229459 0.9290663 0.933567 0.920901 0.76945777 0.9010623 0.8185328 0.89479914 0.9465459 0.8500862 0.7635135 0.916567 0.945426 0.9423085 0.951092 0.8611326 0.9612559 0.9047683 0.9549550 0.8633634 0.9742914 0.9059344 0.8773477 0.8537140 0.8865407 0.8383164 3 0.913552 0.896114 1.3365e-02 7 0.801496 0.670269 0.1312270 0.12727944 8.9916e-01 insignificant 1.00000 1.0000e+00 insignificant 0.1936768 0.93500405 insignificant 1 1.00000 insignificant 0.04005348 0.1678415 insignificant 1.00000 insignificant 0.912690 0.9205903 -0.01015924 7 0.758087 0.661695 0.09639261 9.2919e-01 4.4997e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.7150e-01 6.8736e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.5225e-02 5.1269e-01 insignificant 1.0000e+00 insignificant 0.917136 0.8618926 0.05747688 3 0.897268 0.862151 0.03511715 3.3123e-03 1.8852e-01 lowCoverage 4.6652e-02 1.0000e+00 lowCoverage 3.3755e-01 1.5820e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -2.1798e-02 5.7258e-01 lowCoverage 1.0000e+00 lowCoverage 0.896387 0.9231312 -0.02577055 8 0.690300 0.719641 -0.02934085 9.9231e-01 2.7899e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.8551e-01 2.4829e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -4.8289e-03 9.2886e-01 insignificant 1.0000e+00 insignificant 0.902800 0.8617157 0.04734739 3 0.895707 0.851547 0.04416034 5.0115e-02 1.1759e-01 lowCoverage 4.4630e-01 1.0000e+00 lowCoverage 4.3792e-01 1.3130e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.06185099 1.4838e-01 lowCoverage 1.0000e+00 lowCoverage 0.9302987 0.8617157 0.07082965 3 0.931454 0.851547 0.0799068 6.1164e-02 8.3627e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.2661e-01 7.1436e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0570221 3.4758e-01 lowCoverage 1.00000000 lowCoverage chr21 44011750 44012750 56117 PDXK ENSG00000160209 0.6325000 107 4 0.578604 158 4 0.149706 90 5 0.5687985 73 4 0.4126984 43 2 0.563776 139 5 0.628205 28 2 0.6735601 111 5 0.1803509 39 2 0.6349650 29 2 0.754544 158 5 0.166667 6 0 0.6157335 106 5 0.678571 28 2 0.487500 35 2 0.2380952 13 2 1.0000000 3 0 0.4069702 185 4 0.658376 164 4 0.549561 136 4 0.695135 70 5 0.2977602 72 3 0.526667 41 2 0.612500 52 2 0.5268531 61 5 0.7749875 191 5 0.501420 103 4 0.3555556 18 2 0.695296 155 4 0.6769841 191 5 0.558580 243 5 0.614921 205 5 0.0761502 136 5 0.1434295 145 4 0.0000000 120 4 0.0000000 8 1 0.1666667 100 5 0.3054560 160 5 0.510870 94 3 0.1225073 136 4 0.5432065 49 4 0.2563019 107 4 0.488867 90 4 0.6670718 0.605330 0.318514 0.6053584 0.5929403 0.6219503 0.4817783 0.5992914 0.4045322 0.5693473 0.726346 0.518657 0.4983009 0.726869 0.6982060 0.1941308 0.9006012 0.2597327 0.5603212 0.576419 0.668669 0.40693389 0.8435185 0.6090278 0.42157148 0.7359127 0.4908129 0.4611111 0.684624 0.566286 0.6095679 0.656173 0.0187011 0.0606489 0.0162548 0.0000000 0.0000000 0.1601614 0.3490338 0.1760846 0.4178442 0.3209953 0.4284374 1 0.553604 0.620714 -6.7762e-02 4 0.535490 0.629862 -0.0943720 0.99657648 2.9764e-02 lowCoverage 1.00000 6.1975e-01 lowCoverage 0.8856090 0.22901223 lowCoverage 1 1.00000 lowCoverage -0.04076243 0.5234798 lowCoverage 1.00000 lowCoverage 0.553604 0.0913174 0.46636217 4 0.535490 0.130481 0.40500865 7.7851e-16 1.0000e+00 lowCoverage 1.3684e-14 1.0000e+00 lowCoverage 1.4342e-08 1.0000e+00 lowCoverage 4.7806e-07 1.0000e+00 lowCoverage 4.1368e-01 1.4622e-05 lowCoverage 5.4497e-04 lowCoverage 0.553604 0.3417722 0.21203743 4 0.535490 0.354495 0.18099492 1.3288e-04 9.9964e-01 lowCoverage 3.0902e-03 1.0000e+00 lowCoverage 1.2700e-03 9.9993e-01 lowCoverage 2.8516e-02 1.0000e+00 lowCoverage 1.4461e-01 1.7515e-01 lowCoverage 1.0000e+00 lowCoverage 0.620542 0.0926756 0.52886708 5 0.608218 0.275401 0.33281723 4.5577e-18 9.9900e-01 hypermethylated 1.4702e-16 1.0000e+00 hypermethylated 3.2144e-08 9.9989e-01 hypermethylated 1.2363e-06 1.0000e+00 hypermethylated 4.5444e-01 9.6301e-06 lowCoverage 4.1870e-04 lowCoverage 0.620542 0.3424370 0.27433210 4 0.608218 0.378746 0.22947246 1.3704e-07 9.9983e-01 lowCoverage 8.5650e-06 1.0000e+00 lowCoverage 7.2443e-04 9.9992e-01 lowCoverage 2.3369e-02 1.0000e+00 lowCoverage 0.18537105 9.0914e-02 lowCoverage 8.9226e-01 lowCoverage 0.0926756 0.3424370 -0.25268098 4 0.275401 0.378746 -0.1033448 9.9354e-01 1.8807e-05 lowCoverage 1.0000e+00 2.6487e-04 lowCoverage 9.9607e-01 8.5480e-04 lowCoverage 1.0000e+00 1.4013e-02 lowCoverage -0.2690668 2.7901e-02 lowCoverage 0.26321884 lowCoverage chr21 44012150 44013150 56118 PDXK ENSG00000160209 0.7115968 547 11 0.607562 448 11 0.311075 350 12 0.6095670 360 7 0.6442324 195 9 0.713401 539 12 0.656550 211 9 0.7060657 384 12 0.4760643 263 9 0.7058733 270 9 0.737946 529 12 0.507119 153 7 0.5109955 469 12 0.771937 198 5 0.544579 362 9 0.5572905 145 9 0.6761905 50 4 0.5299270 716 11 0.687555 576 11 0.535599 413 11 0.668617 258 12 0.4058039 225 6 0.645375 308 9 0.653880 178 9 0.5707594 196 9 0.6893844 588 12 0.607662 427 12 0.5458712 138 9 0.727950 508 11 0.5830840 541 12 0.598696 575 12 0.686343 507 12 0.3512939 468 12 0.4397486 437 11 0.3719995 362 10 0.3541667 45 4 0.3939966 242 13 0.4570951 541 12 0.629914 441 10 0.3632031 459 11 0.5775536 380 11 0.3842563 655 11 0.601933 348 10 0.7723888 0.669498 0.509766 0.7284760 0.7381691 0.7837246 0.7282539 0.7196921 0.6966169 0.8066966 0.737551 0.734397 0.6015961 0.738807 0.7179348 0.6383804 0.7397429 0.6475270 0.7550225 0.681310 0.758282 0.57297479 0.7812743 0.7009770 0.67556267 0.7357452 0.6803374 0.7455432 0.761121 0.663089 0.6414677 0.782848 0.4119557 0.5879364 0.4399755 0.5270724 0.5046057 0.5735979 0.6295444 0.5904839 0.5918185 0.6080957 0.6902341 6 0.679553 0.673272 -1.5487e-02 11 0.613456 0.644504 -0.0310482 0.92924239 9.4632e-02 insignificant 1.00000 1.0000e+00 insignificant 0.8132932 0.31012649 insignificant 1 1.00000 insignificant -0.00522917 0.8833833 insignificant 1.00000 insignificant 0.679682 0.4237936 0.21040255 11 0.629161 0.437919 0.19124254 6.5106e-20 1.9073e-02 hypermethylated 1.7133e-18 5.4493e-01 hypermethylated 1.4710e-09 1.1389e-01 hypermethylated 6.1290e-08 1.0000e+00 hypermethylated 2.1534e-01 6.6649e-07 hypermethylated 3.9206e-05 hypermethylated 0.679593 0.6302632 0.10964720 11 0.623209 0.524991 0.09821828 5.7438e-08 9.5604e-01 weaklyHypermeth 3.0230e-06 1.0000e+00 weaklyHypermeth 1.1555e-04 9.3596e-01 weaklyHypermeth 5.2522e-03 1.0000e+00 weaklyHypermeth 9.8684e-02 1.6672e-01 insignificant 1.0000e+00 insignificant 0.672813 0.4233158 0.25056698 12 0.608570 0.408724 0.19984594 4.2259e-20 1.7283e-01 hypermethylated 1.5093e-18 1.0000e+00 hypermethylated 3.3140e-09 7.0477e-01 hypermethylated 1.5781e-07 1.0000e+00 hypermethylated 2.2057e-01 2.2639e-06 hypermethylated 1.3589e-04 hypermethylated 0.673341 0.6299868 0.13372584 11 0.658570 0.523325 0.13524553 1.9056e-11 9.7260e-01 weaklyHypermeth 3.4373e-09 1.0000e+00 weaklyHypermeth 1.5576e-04 9.7744e-01 weaklyHypermeth 7.4173e-03 1.0000e+00 weaklyHypermeth 0.10391346 1.4864e-01 insignificant 1.0000e+00 insignificant 0.4235182 0.6298246 -0.12511499 11 0.437919 0.489277 -0.0513576 6.3975e-02 3.0898e-05 weaklyHypometh 1.0000e+00 4.0656e-04 weaklyHypometh 1.0865e-01 2.3571e-03 weaklyHypometh 1.0000e+00 3.0611e-02 weaklyHypometh -0.1166552 1.1043e-01 insignificant 0.64204436 insignificant chr21 44068050 44069050 56120 ENSG00000215458 0.7560612 461 15 0.786001 387 16 0.743340 610 16 0.7652341 465 15 0.8089365 341 13 0.770468 729 15 0.803271 388 15 0.7721396 429 15 0.7575808 436 15 0.7814458 583 13 0.827002 470 13 0.865326 341 13 0.8178246 428 11 0.823378 326 11 0.857105 573 13 0.7401649 409 10 0.8310923 966 11 0.7641281 415 10 0.843207 435 15 0.829869 429 14 0.754781 179 12 0.6938182 212 11 0.791820 424 15 0.652685 223 15 0.8365228 182 13 0.8155981 656 16 0.761184 384 15 0.6890808 262 13 0.803271 563 15 0.7900995 686 16 0.822604 569 15 0.817518 607 15 0.5939327 447 16 0.4744272 304 15 0.5670622 222 9 0.6209013 80 9 0.4348587 368 14 0.7607584 545 15 0.801313 492 14 0.8220301 543 15 0.8308073 400 13 0.7870921 401 13 0.763923 352 11 0.8028873 0.790214 0.761745 0.8127071 0.8226734 0.8151367 0.7985839 0.8251743 0.8179868 0.8450474 0.814618 0.807348 0.8454565 0.826917 0.8269142 0.8239958 0.8310680 0.8216096 0.8468050 0.821048 0.760324 0.77118711 0.8064332 0.7776350 0.80905416 0.8401980 0.7553803 0.8013585 0.819637 0.815879 0.8318441 0.802999 0.3790766 0.2629919 0.3676898 0.5905277 0.2590416 0.6995185 0.8265346 0.8465137 0.8232589 0.8133011 0.8022944 8 0.869764 0.818274 1.3134e-02 15 0.742624 0.735407 0.0072166 0.00313751 9.4545e-01 weaklyHypermeth 0.52292 1.0000e+00 insignificant 0.0399973 0.97840963 weaklyHypermeth 1 1.00000 insignificant 0.02809685 0.1662208 insignificant 1.00000 insignificant 0.869764 0.5305188 0.29814325 15 0.742624 0.560718 0.18190605 2.8749e-31 9.2666e-01 hypermethylated 1.4374e-29 1.0000e+00 hypermethylated 5.8443e-09 9.1714e-01 hypermethylated 2.1646e-07 1.0000e+00 hypermethylated 2.2186e-01 4.8471e-03 weaklyHypermeth 5.4462e-02 weaklyHypermeth 0.870035 0.8295247 -0.00812695 15 0.786308 0.831035 -0.04472785 6.5088e-01 7.5989e-02 insignificant 1.0000e+00 9.0463e-01 insignificant 9.4073e-01 3.2041e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -3.8543e-03 8.0044e-01 insignificant 1.0000e+00 insignificant 0.818274 0.5305188 0.26882127 15 0.735407 0.560718 0.17468949 2.3309e-15 4.5634e-01 hypermethylated 5.8272e-14 1.0000e+00 hypermethylated 3.8553e-05 7.5414e-01 hypermethylated 6.7636e-04 1.0000e+00 hypermethylated 1.9376e-01 7.4512e-03 weaklyHypermeth 7.9268e-02 weaklyHypermeth 0.818531 0.8295247 -0.02390175 15 0.749255 0.831035 -0.08178068 9.8168e-01 7.9576e-03 weaklyHypometh 1.0000e+00 3.4920e-01 insignificant 9.8680e-01 1.2523e-02 weaklyHypometh 1.0000e+00 6.4273e-01 insignificant -0.03195118 1.5204e-01 insignificant 1.0000e+00 insignificant 0.5319693 0.8295247 -0.31105623 15 0.577658 0.831035 -0.2533770 9.9993e-01 4.3226e-10 hypomethylated 1.0000e+00 1.7291e-08 hypomethylated 9.9993e-01 1.5786e-06 hypomethylated 1.0000e+00 8.3083e-05 hypomethylated -0.2257096 4.1665e-03 weaklyHypometh 0.06312882 weaklyHypometh chr21 44127450 44128450 56126 AGPAT3 ENSG00000160216 0.8977526 328 7 0.918305 113 7 0.915745 161 7 0.9437808 300 7 0.8622449 82 6 0.934465 345 7 0.868365 160 6 0.8821036 98 7 0.9116016 148 7 0.9014053 141 6 0.939974 271 7 0.916802 98 6 0.9310550 102 4 0.949681 95 7 0.900474 153 7 0.8571429 81 3 1.0000000 7 1 0.8788270 587 7 0.869654 222 7 0.933497 249 7 0.846726 65 6 0.9703820 115 4 0.937628 174 7 0.946259 144 6 0.8038144 290 7 0.9054569 197 7 0.713867 143 6 0.7812500 74 3 0.897976 141 7 0.9324030 189 7 0.898939 169 7 0.945057 289 7 0.6524428 204 7 0.9630252 194 7 0.6666667 102 6 1.0000000 2 0 0.8480503 180 7 0.9162040 242 7 0.917765 282 7 0.9287155 246 7 0.9105573 313 7 0.9285956 378 7 0.924269 285 7 0.9016390 0.846035 0.901227 0.9667148 0.8996547 0.9414375 0.9285595 0.9028751 0.9212204 0.9415110 0.936611 0.908524 0.9397246 0.950020 0.9093443 0.9697885 0.9645238 0.9138481 0.8993627 0.913519 0.853642 0.95154875 0.9538516 0.9501654 0.96107164 0.9176599 0.8346974 0.9518505 0.912741 0.897068 0.9096428 0.940568 0.5799536 0.9927137 0.6585416 NA 0.7799820 0.8796650 0.9404327 0.9328814 0.9355995 0.9517580 0.9456313 3 0.922213 0.922496 -3.1775e-04 7 0.917261 0.915124 0.0021371 0.25519575 3.5534e-01 insignificant 1.00000 1.0000e+00 insignificant 0.4282229 0.41491020 insignificant 1 1.00000 insignificant 0.02899725 0.2494593 insignificant 1.00000 insignificant 0.922213 0.8127706 0.10831112 7 0.917261 0.831664 0.08559663 2.9306e-05 9.9072e-01 weaklyHypermeth 2.4022e-04 1.0000e+00 weaklyHypermeth 2.5132e-01 9.5400e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.9579e-02 3.0810e-01 insignificant 1.0000e+00 insignificant 0.922213 0.9368351 -0.01265585 7 0.917261 0.921001 -0.00374040 6.6145e-01 2.6299e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.0795e-01 4.4380e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -1.1337e-02 2.0393e-01 insignificant 1.0000e+00 insignificant 0.922496 0.8127706 0.11018878 7 0.915124 0.831664 0.08345952 1.6282e-03 9.3575e-01 weaklyHypermeth 1.0927e-02 1.0000e+00 weaklyHypermeth 2.2120e-01 9.1582e-01 insignificant 9.7018e-01 1.0000e+00 insignificant 4.0582e-02 5.5484e-01 insignificant 1.0000e+00 insignificant 0.922496 0.9368351 -0.01220662 7 0.915124 0.921001 -0.00587751 4.6186e-01 3.0910e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.3915e-01 2.9470e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.04033391 1.0649e-01 insignificant 9.5083e-01 insignificant 0.8127706 0.9368351 -0.11945929 7 0.831664 0.921001 -0.0893370 8.8780e-01 4.0196e-02 weaklyHypometh 1.0000e+00 2.2582e-01 insignificant 8.3795e-01 3.4596e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0809157 2.4270e-01 insignificant 1.00000000 insignificant chr21 44216750 44217750 56132 AGPAT3 ENSG00000160216 0.9207041 351 5 0.765613 130 5 0.723433 151 5 0.9241255 266 5 0.6817549 102 5 0.762153 411 5 0.838036 115 4 0.8840683 147 5 0.8807841 174 4 0.9029251 163 4 0.817726 174 5 0.731671 147 4 0.8443177 224 5 0.880061 114 5 0.882902 199 5 0.7113830 129 4 0.6668651 59 4 0.9129428 632 5 0.792848 136 5 0.921937 288 5 0.948485 37 4 0.8990215 148 5 0.777428 171 5 0.950893 56 4 0.9540700 239 5 0.9292847 216 5 0.837815 104 5 0.9657407 81 4 0.849275 151 5 0.9122715 184 5 0.903351 154 5 0.917153 254 5 0.6541279 153 5 0.6919808 158 5 0.8697917 106 4 0.7672549 82 4 0.7700933 110 5 0.7672291 211 5 0.868665 211 5 0.8668890 207 5 0.8755575 232 5 0.8204408 233 5 0.926033 173 5 0.9205597 0.742910 0.710541 0.9195977 0.6057672 0.9238422 0.7951676 0.8397205 0.8414480 0.8660318 0.772092 0.719255 0.8229297 0.896913 0.8506002 0.6797820 0.6444338 0.9219357 0.7540589 0.922479 0.927912 0.88445640 0.7300393 0.9455094 0.94065364 0.9129624 0.8156834 0.9656523 0.842043 0.915901 0.8945360 0.899460 0.7135771 0.6341150 0.8409505 0.7475948 0.7459818 0.7165863 0.8853350 0.8734978 0.8796764 0.8530279 0.9395479 4 0.835320 0.900279 -4.8589e-02 5 0.843380 0.900342 -0.0569614 0.96016677 1.9789e-03 weaklyHypometh 1.00000 1.9789e-01 insignificant 0.9269192 0.00243816 weaklyHypometh 1 0.34831 insignificant -0.08141987 0.0030351 lowCoverage 0.75877 lowCoverage 0.835320 0.7451220 0.11498068 5 0.843380 0.746825 0.09655536 1.9999e-04 9.9945e-01 weaklyHypermeth 1.3985e-03 1.0000e+00 weaklyHypermeth 5.0446e-02 9.5418e-01 insignificant 3.0760e-01 1.0000e+00 insignificant 6.8900e-02 8.6922e-02 lowCoverage 5.4709e-01 lowCoverage 0.835320 0.8617424 -0.01853801 5 0.843380 0.866731 -0.02335095 1.0016e-03 1.5057e-01 inconclusive 1.7581e-02 1.0000e+00 inconclusive 6.3091e-03 1.0942e-02 weaklyHypometh 1.1471e-01 3.0136e-01 insignificant -4.9204e-02 7.2564e-02 lowCoverage 6.6222e-01 lowCoverage 0.900279 0.7451220 0.15941663 5 0.900342 0.746825 0.15351677 4.2086e-06 1.0000e+00 weaklyHypermeth 4.4301e-05 1.0000e+00 weaklyHypermeth 1.7615e-03 9.9979e-01 weaklyHypermeth 1.8083e-02 1.0000e+00 weaklyHypermeth 1.5032e-01 2.4638e-03 lowCoverage 3.1267e-02 lowCoverage 0.900279 0.8617424 0.03801319 5 0.900342 0.866731 0.03361046 1.2400e-03 7.1673e-01 weaklyHypermeth 2.2963e-02 1.0000e+00 weaklyHypermeth 4.6709e-03 7.7590e-01 weaklyHypermeth 9.9380e-02 1.0000e+00 weaklyHypermeth 0.03221538 1.9410e-01 lowCoverage 1.0000e+00 lowCoverage 0.7451220 0.8617424 -0.11353951 5 0.746825 0.866731 -0.1199063 9.9366e-01 1.9094e-03 weaklyHypometh 1.0000e+00 1.6749e-02 weaklyHypometh 9.8465e-01 2.3195e-02 weaklyHypometh 1.0000e+00 1.8409e-01 insignificant -0.1181041 1.0126e-02 lowCoverage 0.12657177 lowCoverage chr21 44230050 44231050 56133 AGPAT3 ENSG00000160216 0.1884007 334 11 0.136704 368 13 0.148792 198 9 0.1334833 407 11 0.1225895 74 5 0.305104 548 11 0.298594 146 9 0.2542856 231 11 0.0963655 172 9 0.1605808 173 11 0.238603 282 13 0.172408 97 6 0.0507396 220 9 0.000000 3 0 0.287344 111 9 0.2260221 54 8 0.0586580 68 8 0.1231876 381 11 0.239427 202 11 0.134229 524 11 0.274985 79 9 0.1873666 275 9 0.164385 233 11 0.193316 109 8 0.1048911 260 11 0.3068155 405 13 0.132437 187 9 0.0666667 37 3 0.200153 208 9 0.1660139 440 13 0.136658 505 13 0.456321 403 13 0.0443971 341 13 0.2308596 196 11 0.1538462 185 11 0.0685816 294 13 0.0838861 150 10 0.0402850 401 13 0.150737 502 13 0.2232306 463 13 0.1576919 373 13 0.1281961 302 11 0.135417 519 13 0.1751049 0.109649 0.133428 0.0845188 0.0969918 0.1989901 0.1600177 0.1994028 0.0831311 0.1614140 0.127187 0.204279 0.0502701 NA 0.1362101 0.2089203 0.0577464 0.1376257 0.2341739 0.069222 0.255795 0.11137608 0.1032754 0.1631172 0.09211506 0.1274345 0.1386694 0.0608273 0.179766 0.137175 0.1178704 0.356643 0.0241049 0.0719963 0.0948905 0.0458396 0.0893010 0.0568846 0.1078476 0.1719519 0.0840350 0.1306261 0.1086257 6 0.156543 0.190112 -3.1045e-02 11 0.188140 0.238372 -0.0502320 0.98871644 1.9200e-02 weaklyHypometh 1.00000 4.9232e-01 insignificant 0.9701773 0.07743661 insignificant 1 1.00000 insignificant -0.03039142 0.4055983 insignificant 1.00000 insignificant 0.156577 0.0548819 0.10506291 11 0.202612 0.087475 0.11513675 5.9609e-09 1.0000e+00 weaklyHypermeth 7.5455e-08 1.0000e+00 weaklyHypermeth 4.7409e-07 9.9997e-01 weaklyHypermeth 1.0775e-05 1.0000e+00 weaklyHypermeth 6.5133e-02 1.0230e-01 insignificant 6.0926e-01 insignificant 0.156577 0.1153312 0.03453168 11 0.202612 0.165105 0.03750707 4.6023e-02 8.1930e-01 weaklyHypermeth 4.5120e-01 1.0000e+00 insignificant 2.0065e-01 6.6958e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7213e-03 7.0795e-01 insignificant 1.0000e+00 insignificant 0.189914 0.0548819 0.13915214 11 0.218246 0.087475 0.13077120 3.5458e-12 1.0000e+00 weaklyHypermeth 6.6902e-11 1.0000e+00 weaklyHypermeth 1.1767e-10 1.0000e+00 weaklyHypermeth 9.0518e-09 1.0000e+00 weaklyHypermeth 9.5525e-02 4.3452e-02 weaklyHypermeth 3.1487e-01 insignificant 0.189914 0.1153312 0.06101207 11 0.218246 0.165105 0.05314152 1.0984e-03 9.7625e-01 weaklyHypermeth 2.1536e-02 1.0000e+00 weaklyHypermeth 4.4154e-03 9.5909e-01 weaklyHypermeth 9.8120e-02 1.0000e+00 weaklyHypermeth 0.04011273 2.6503e-01 insignificant 1.0000e+00 insignificant 0.0548819 0.1153312 -0.07618132 13 0.087475 0.165105 -0.0776297 1.0000e+00 5.3719e-09 weaklyHypometh 1.0000e+00 1.4922e-07 weaklyHypometh 1.0000e+00 8.4845e-07 weaklyHypometh 1.0000e+00 4.9909e-05 weaklyHypometh -0.0554120 1.5208e-01 insignificant 0.77593480 insignificant chr21 44398250 44399250 56140 C21orf33 ENSG00000160221 0.8835857 412 11 0.851498 612 10 0.764618 307 11 0.9201243 463 11 0.8186931 182 11 0.926240 639 11 0.915024 379 11 0.9017746 347 11 0.9366468 243 11 0.9298262 202 11 0.896996 485 11 0.821495 145 10 0.8764771 295 11 0.996429 128 8 0.854150 244 11 0.8171204 129 10 0.7756696 70 6 0.8976929 582 11 0.928452 650 11 0.937125 554 11 0.932756 180 11 0.8504848 199 11 0.920658 360 11 0.823027 259 11 0.9504498 204 10 0.9538394 613 11 0.911199 230 11 0.8050793 156 10 0.840094 592 11 0.9466941 624 11 0.932361 605 11 0.953318 586 11 0.7161990 435 11 0.6870545 284 11 0.7468835 245 4 0.8247549 102 7 0.7241162 333 11 0.6272466 593 11 0.890319 583 11 0.9231114 515 11 0.8583684 307 10 0.8380241 520 9 0.929299 432 11 0.8852391 0.850316 0.830771 0.9270140 0.8375322 0.9311299 0.9208515 0.9005761 0.9233125 0.9270325 0.908546 0.910537 0.9067848 0.967236 0.9165775 0.8704457 0.8092323 0.9058778 0.9350654 0.924560 0.939373 0.84712325 0.9333071 0.8325120 0.95661001 0.9445098 0.9147856 0.9044424 0.920759 0.933952 0.9216532 0.953137 0.6841062 0.6917112 0.6681673 0.8240564 0.7113015 0.7600941 0.9021214 0.9233623 0.8696094 0.8432174 0.9369385 10 0.914354 0.933811 -1.9227e-02 11 0.836718 0.881064 -0.0443461 0.95981589 8.2839e-03 weaklyHypometh 1.00000 3.3136e-01 insignificant 0.9890930 0.00951039 weaklyHypometh 1 0.46297 insignificant -0.01918154 0.3672849 insignificant 1.00000 insignificant 0.914472 0.7756024 0.13009562 11 0.862619 0.639755 0.22286408 3.3782e-19 9.9934e-01 weaklyHypermeth 8.4456e-18 1.0000e+00 weaklyHypermeth 5.5231e-04 9.9465e-01 weaklyHypermeth 5.8138e-03 1.0000e+00 weaklyHypermeth 1.6144e-01 7.3578e-04 weaklyHypermeth 1.1674e-02 weaklyHypermeth 0.914788 0.9007213 0.01170854 11 0.901277 0.893371 0.00790604 2.9481e-02 3.1072e-01 weaklyHypermeth 3.0393e-01 1.0000e+00 insignificant 3.3731e-02 3.6939e-01 weaklyHypermeth 4.5582e-01 1.0000e+00 insignificant -5.3425e-03 8.1532e-01 insignificant 1.0000e+00 insignificant 0.933768 0.7756024 0.15087727 11 0.871915 0.639755 0.23215991 1.2672e-12 1.0000e+00 weaklyHypermeth 2.5344e-11 1.0000e+00 weaklyHypermeth 1.5360e-04 9.9999e-01 weaklyHypermeth 2.2260e-03 1.0000e+00 weaklyHypermeth 1.8062e-01 2.9087e-04 weaklyHypermeth 5.7033e-03 weaklyHypermeth 0.934116 0.9007213 0.03102633 11 0.916809 0.893371 0.02343747 2.2576e-03 8.8401e-01 weaklyHypermeth 3.7284e-02 1.0000e+00 weaklyHypermeth 7.9656e-03 9.8720e-01 weaklyHypermeth 1.4751e-01 1.0000e+00 insignificant 0.01383905 5.7560e-01 insignificant 1.0000e+00 insignificant 0.7766600 0.9007213 -0.12326474 11 0.725771 0.893371 -0.1676000 9.8692e-01 6.8289e-06 weaklyHypometh 1.0000e+00 1.0839e-04 weaklyHypometh 9.8158e-01 7.0328e-03 weaklyHypometh 1.0000e+00 7.1038e-02 weaklyHypometh -0.1667819 7.1698e-04 weaklyHypometh 0.01748734 weaklyHypometh chr21 44451850 44452850 56142 C21orf33 ENSG00000160221 0.7663833 168 10 0.790428 348 11 0.664765 338 11 0.8912875 214 8 0.8980279 130 6 0.820079 305 9 0.572546 141 6 0.8879612 150 6 0.9095594 103 5 0.9123810 90 4 0.916323 296 9 0.702381 38 4 0.8920455 96 4 0.808950 105 4 0.873580 106 6 0.8836420 78 6 NA 0 0 0.6928395 184 10 0.840824 247 6 0.833053 272 9 0.972807 83 6 0.8947849 78 6 0.869175 140 7 0.823621 171 7 0.7594567 237 8 0.9425610 434 11 0.713755 118 8 0.6584596 94 4 0.652418 211 5 0.8439798 397 11 0.790527 351 11 0.955657 252 10 0.3420295 438 11 0.5731801 144 8 0.6115331 302 7 0.1843048 221 7 0.4235451 246 9 0.1136190 477 11 0.863500 214 8 0.7675648 206 11 0.7945518 146 8 0.7692407 103 4 0.811790 178 9 0.8912725 0.818031 0.706376 0.8838981 0.9598478 0.9171676 0.6894625 0.9108570 0.9226302 0.9434899 0.931232 0.933445 0.9693919 0.944328 0.8880537 0.8114735 NA 0.7472193 0.8688552 0.920171 0.957288 0.94137050 0.9457159 0.9357190 0.88319340 0.9236879 0.7256300 0.9393939 0.813469 0.890917 0.8812529 0.917281 0.4025331 0.7209674 0.7864803 0.3341660 0.6309754 0.1534749 0.8903430 0.8651132 0.8573934 0.8739184 0.8431967 4 0.866197 0.886888 -2.0093e-02 11 0.748425 0.754973 -0.0065482 0.97515590 3.3455e-02 weaklyHypometh 1.00000 6.4361e-01 insignificant 0.9852342 0.39193261 insignificant 1 1.00000 insignificant -0.00430764 0.9133933 insignificant 1.00000 insignificant 0.866236 0.4097374 0.44640288 11 0.765197 0.316154 0.44904234 2.7621e-36 1.0000e+00 hypermethylated 1.6248e-34 1.0000e+00 hypermethylated 3.9280e-11 9.9996e-01 hypermethylated 2.4550e-09 1.0000e+00 hypermethylated 4.4409e-01 2.2647e-03 weaklyHypermeth 2.9412e-02 weaklyHypermeth 0.868669 0.8229044 0.02186822 8 0.850268 0.807079 0.04318959 1.1732e-02 5.6349e-01 weaklyHypermeth 1.4484e-01 1.0000e+00 insignificant 3.0887e-02 9.6269e-01 weaklyHypermeth 4.2311e-01 1.0000e+00 insignificant 1.7463e-02 5.4908e-01 insignificant 1.0000e+00 insignificant 0.886888 0.4099617 0.47317191 11 0.754973 0.338737 0.41623645 6.7196e-31 1.0000e+00 hypermethylated 4.4798e-29 1.0000e+00 hypermethylated 5.0618e-11 1.0000e+00 hypermethylated 4.2182e-09 1.0000e+00 hypermethylated 4.4840e-01 1.7479e-03 weaklyHypermeth 2.3305e-02 weaklyHypermeth 0.887843 0.8229044 0.04453157 8 0.869966 0.807079 0.06288734 8.7522e-03 8.7996e-01 weaklyHypermeth 1.0831e-01 1.0000e+00 insignificant 1.4379e-02 9.7976e-01 weaklyHypermeth 2.4372e-01 1.0000e+00 insignificant 0.02177074 5.6010e-01 insignificant 1.0000e+00 insignificant 0.4102142 0.8229044 -0.40823102 8 0.340210 0.807079 -0.4668681 1.0000e+00 1.6876e-18 hypomethylated 1.0000e+00 1.4063e-16 hypomethylated 1.0000e+00 3.4120e-08 hypomethylated 1.0000e+00 3.3836e-06 hypomethylated -0.4266274 3.0277e-03 weaklyHypometh 0.04968723 weaklyHypometh chr21 44474250 44475250 56144 C21orf33 ENSG00000160221 0.8029821 246 7 0.871398 131 5 0.815109 102 5 0.9038038 313 7 0.8515263 47 3 0.778521 269 7 0.831818 40 4 0.9133969 113 5 0.9029952 109 5 0.9306696 141 5 0.938790 149 5 0.800000 40 5 0.9660441 182 5 0.964474 73 5 0.935354 102 5 0.7200000 26 4 0.7390614 69 5 0.8210705 339 5 0.905303 87 7 0.912846 173 7 0.840896 48 5 0.9328184 105 5 0.878967 182 7 0.960000 102 5 0.9447619 77 5 0.9198914 248 7 0.891414 94 5 0.8578782 70 5 0.901524 111 5 0.9237711 208 7 0.822817 148 7 0.853238 229 7 0.7310731 137 5 0.6982996 78 5 0.8352719 381 7 0.6184371 41 2 0.7954762 86 5 0.8027362 181 7 0.830064 180 7 0.8163033 229 5 0.8877705 268 7 0.8843771 201 5 0.892665 290 7 0.8916565 0.878032 0.826607 0.9101052 0.8456200 0.8683221 0.8419894 0.9175747 0.9083209 0.9323038 0.939866 0.814462 0.9667141 0.966722 0.9397790 0.7406577 0.7958645 0.9497159 0.9836934 0.940789 0.844601 0.93668041 0.8905546 0.9578475 0.94821695 0.9489221 0.8996240 0.8638693 0.908843 0.955118 0.9371948 0.944366 0.7504797 0.7273470 0.7856720 0.6812215 0.8152893 0.8398090 0.9124610 0.9402427 0.8933501 0.9409606 0.9627586 5 0.902510 0.914867 -2.0632e-02 5 0.843436 0.873317 -0.0298813 0.92523455 9.3091e-02 insignificant 1.00000 1.0000e+00 insignificant 0.9347543 0.19938155 insignificant 1 1.00000 insignificant -0.02874005 0.1755236 insignificant 1.00000 insignificant 0.902510 0.7865044 0.10724167 5 0.843436 0.807891 0.03554436 4.2230e-05 2.0208e-01 weaklyHypermeth 3.3252e-04 1.0000e+00 weaklyHypermeth 2.2243e-02 5.3490e-01 weaklyHypermeth 1.5235e-01 1.0000e+00 insignificant 1.1838e-01 1.2881e-02 weaklyHypermeth 1.1604e-01 insignificant 0.902510 0.9220223 -0.02093667 5 0.843436 0.875064 -0.03162831 9.9079e-01 2.3904e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9299e-01 2.2207e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.0222e-03 8.9745e-01 insignificant 1.0000e+00 insignificant 0.914867 0.7865044 0.13013331 5 0.873317 0.807891 0.06542567 2.5376e-05 2.3415e-01 weaklyHypermeth 2.3280e-04 1.0000e+00 weaklyHypermeth 1.0991e-02 3.1501e-01 weaklyHypermeth 8.0815e-02 1.0000e+00 weaklyHypermeth 1.4712e-01 4.8430e-03 weaklyHypermeth 5.4416e-02 weaklyHypermeth 0.914920 0.9212329 0.00138391 5 0.887393 0.777835 0.10955822 7.5313e-01 5.0166e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.3393e-01 6.2577e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03176225 1.5533e-01 insignificant 1.0000e+00 insignificant 0.7865044 0.9220223 -0.12185850 7 0.807891 0.875064 -0.0671727 4.7741e-01 2.9087e-02 weaklyHypometh 1.0000e+00 1.7845e-01 insignificant 9.0164e-01 6.8001e-02 insignificant 1.0000e+00 4.3313e-01 insignificant -0.1153535 1.5613e-02 weaklyHypometh 0.17542863 insignificant chr21 44493450 44494450 56146 ICOSLG ENSG00000160223 0.6197860 167 8 0.567356 57 4 0.645089 106 8 0.4970388 223 8 0.3750000 22 2 0.861039 117 2 0.727315 114 8 0.4111111 58 4 0.7416667 16 2 0.6117915 127 7 0.609436 45 4 0.518991 102 6 0.6500000 13 2 0.423611 17 2 0.892857 17 2 0.3750000 8 0 0.8000000 11 0 0.7365079 168 2 0.861566 103 6 0.744940 174 8 0.805556 38 2 0.7176471 47 2 0.631476 64 2 0.754594 64 3 0.6956631 170 4 0.6927362 73 2 0.607517 27 2 0.5625000 10 0 0.596667 54 2 0.8507320 105 4 0.630833 65 4 0.634804 39 2 0.4158730 72 2 0.3795833 84 6 0.4143836 148 2 0.5294118 34 2 0.4040948 57 2 0.3901260 100 4 0.671813 177 8 0.4647619 64 4 0.2398619 173 8 0.5357143 28 2 0.527233 105 2 0.5539520 0.698174 0.492063 0.3871549 0.2500000 0.7005566 0.7083842 0.5571429 0.6285714 0.4861895 0.409139 0.458874 0.6285714 0.394841 0.7755102 NA 0.4642857 0.7219955 0.9159664 0.648980 0.595238 0.57142857 0.6018712 0.8145604 0.55761960 0.6959511 0.4535465 0.1428571 0.478571 0.794841 0.5550000 0.840336 0.5823129 0.4614286 0.8043053 0.5126050 0.5129310 0.2769424 0.5505433 0.5504762 0.1991036 0.5204082 0.5101152 2 0.627781 0.658245 -5.4876e-02 2 0.645628 0.683753 -0.0381252 0.80787938 1.8145e-02 lowCoverage 1.00000 4.7749e-01 lowCoverage 0.8932763 0.20623383 lowCoverage 1 1.00000 lowCoverage -0.04822193 0.2871144 lowCoverage 1.00000 lowCoverage 0.627781 0.5535354 0.06298232 2 0.645628 0.365152 0.28047613 1.8860e-06 8.1680e-01 lowCoverage 1.8310e-05 1.0000e+00 lowCoverage 2.7298e-03 9.2801e-01 lowCoverage 2.4816e-02 1.0000e+00 lowCoverage 2.1126e-01 5.1010e-05 lowCoverage 1.4574e-03 lowCoverage 0.627781 0.4680073 0.15806994 5 0.645628 0.460614 0.18501421 8.5154e-04 9.9927e-01 weaklyHypermeth 1.5769e-02 1.0000e+00 weaklyHypermeth 1.2147e-02 9.9989e-01 weaklyHypermeth 2.0944e-01 1.0000e+00 insignificant 1.4563e-01 1.1412e-01 lowCoverage 8.2694e-01 lowCoverage 0.658245 0.5535354 0.08803495 2 0.683753 0.365152 0.31860134 1.0305e-03 9.4448e-01 lowCoverage 7.1563e-03 1.0000e+00 lowCoverage 5.6306e-03 9.8908e-01 lowCoverage 4.7717e-02 1.0000e+00 lowCoverage 2.5948e-01 1.3912e-06 lowCoverage 1.0702e-04 lowCoverage 0.658245 0.4680073 0.18957202 2 0.683753 0.460614 0.22313942 1.0964e-03 9.9975e-01 lowCoverage 2.1536e-02 1.0000e+00 lowCoverage 1.6054e-02 9.9999e-01 lowCoverage 2.6318e-01 1.0000e+00 lowCoverage 0.19385037 4.8580e-02 lowCoverage 6.7473e-01 lowCoverage 0.5535354 0.4680073 0.08824856 2 0.365152 0.460614 -0.0954619 5.0959e-01 2.8389e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.1304e-01 3.4465e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0656313 4.1750e-01 lowCoverage 1.00000000 lowCoverage chr21 45079250 45080250 56150 SUMO3 ENSG00000184900 0.9611569 255 5 0.787064 304 5 0.761628 236 5 0.9545614 265 5 0.6307456 163 5 0.834065 342 5 0.923338 155 5 0.7620809 234 5 0.7636166 227 5 0.8964455 232 5 0.881100 281 5 0.723313 117 5 0.8207443 260 5 0.754753 189 5 0.702246 305 5 0.7675189 130 5 0.4000000 28 3 0.9499619 315 5 0.795859 317 5 0.901426 260 5 0.692619 53 5 0.8506010 104 5 0.733141 167 5 0.613495 125 5 0.8333333 60 5 0.8257335 265 5 0.767087 159 5 0.7900895 167 5 0.913088 275 5 0.9555558 412 5 0.889691 233 5 0.930979 238 5 0.7855268 192 5 0.7073065 115 5 0.3622642 111 2 1.0000000 17 0 0.7240265 204 5 0.8848977 227 5 0.913843 203 5 0.9387876 178 5 0.9336913 176 5 0.8995334 185 5 0.935680 272 5 0.9527378 0.793244 0.756660 0.9529742 0.7684582 0.7875751 0.9186243 0.9178115 0.9133599 0.8998767 0.888000 0.869966 0.8065405 0.891320 0.8350664 0.9300732 0.3989614 0.9536649 0.9074754 0.903636 0.699845 0.83291944 0.7149853 0.7306610 0.81127596 0.8100868 0.9180478 0.9478031 0.897002 0.949166 0.8970267 0.932590 0.7718628 0.6905632 0.4151503 1.0000000 0.8724636 0.9036908 0.9120031 0.9402992 0.9390136 0.8895836 0.9275969 5 0.868877 0.875996 -6.6253e-03 5 0.755463 0.797411 -0.0419479 0.92074878 2.3861e-01 insignificant 1.00000 1.0000e+00 insignificant 0.8253075 0.47208432 insignificant 1 1.00000 insignificant -0.01770330 0.6739915 lowCoverage 1.00000 lowCoverage 0.868877 0.8348730 0.03502807 5 0.755463 0.693567 0.06189655 1.1184e-01 9.6542e-01 insignificant 4.6598e-01 1.0000e+00 insignificant 3.8679e-01 8.4562e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.4578e-02 5.7887e-01 lowCoverage 1.0000e+00 lowCoverage 0.870519 0.9211045 -0.05011775 5 0.870192 0.926591 -0.05639834 8.7172e-01 1.8084e-02 weaklyHypometh 1.0000e+00 3.5460e-01 insignificant 6.2742e-01 8.3845e-03 weaklyHypometh 1.0000e+00 2.4660e-01 insignificant -1.2573e-01 4.4708e-04 lowCoverage 2.7943e-02 lowCoverage 0.875996 0.8348730 0.04143928 5 0.797411 0.693567 0.10384445 5.7806e-02 9.8086e-01 insignificant 2.6886e-01 1.0000e+00 insignificant 3.3692e-01 9.2129e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.2281e-02 4.6697e-01 lowCoverage 1.0000e+00 lowCoverage 0.877053 0.9211045 -0.04494716 5 0.876894 0.926591 -0.04969723 2.9588e-01 1.5710e-02 weaklyHypometh 1.0000e+00 4.9095e-01 insignificant 5.2660e-01 2.9327e-03 weaklyHypometh 1.0000e+00 3.2345e-01 insignificant -0.10802257 3.9022e-03 weaklyHypometh 1.8582e-01 insignificant 0.8358382 0.9211045 -0.08511063 5 0.832280 0.926591 -0.0943106 9.9424e-01 2.4701e-03 weaklyHypometh 1.0000e+00 2.0082e-02 weaklyHypometh 8.0457e-01 7.6903e-02 insignificant 1.0000e+00 4.7766e-01 insignificant -0.1803035 9.7098e-02 lowCoverage 0.60309091 lowCoverage chr21 45089850 45090850 56151 SUMO3 ENSG00000184900 0.1317956 504 13 0.025625 318 15 0.147559 536 16 0.1877098 526 13 0.0285164 361 15 0.175748 928 15 0.031870 392 15 0.1516095 506 15 0.1283951 555 14 0.0189056 654 14 0.109658 615 15 0.101377 392 14 0.0606628 577 15 0.166102 333 12 0.094046 582 15 0.0216191 418 14 0.0183333 150 10 0.0796590 670 13 0.052654 445 15 0.157326 779 16 0.120143 233 15 0.0565764 319 8 0.064410 424 15 0.122854 270 15 0.1391813 185 7 0.1207459 661 15 0.163978 737 15 0.0449029 349 15 0.057014 469 15 0.0308843 646 15 0.067267 642 16 0.074180 781 15 0.0091667 471 15 0.0113702 369 15 0.0935315 378 12 0.0000000 96 7 0.1664777 300 16 0.0801933 616 15 0.049035 794 15 0.1587064 560 13 0.1776481 430 12 0.0347302 557 13 0.125972 541 13 0.0467124 0.029195 0.034225 0.0325471 0.0210458 0.0922809 0.0086403 0.0292176 0.0203989 0.0297629 0.049996 0.042913 0.0349950 0.082288 0.0469100 0.0173308 0.0329333 0.0311386 0.0337698 0.027812 0.049332 0.05735063 0.0637030 0.1150369 0.04237808 0.0146942 0.0337660 0.0444810 0.071839 0.030525 0.0290891 0.049735 0.0096916 0.0134299 0.0106520 0.0015414 0.0378407 0.0085672 0.0414747 0.0505031 0.0484858 0.0251637 0.0390454 12 0.047080 0.050910 -1.5602e-03 15 0.141313 0.102043 0.0392701 0.70446522 7.1898e-01 insignificant 1.00000 1.0000e+00 insignificant 0.6424394 0.60768743 insignificant 1 1.00000 insignificant 0.00594704 0.7440390 insignificant 1.00000 insignificant 0.047261 0.0165919 0.03925870 15 0.163203 0.121447 0.04175638 2.6667e-05 9.9614e-01 weaklyHypermeth 2.2039e-04 1.0000e+00 weaklyHypermeth 1.6130e-04 9.9714e-01 weaklyHypermeth 2.0680e-03 1.0000e+00 weaklyHypermeth 3.4335e-02 2.8415e-01 insignificant 1.0000e+00 insignificant 0.046912 0.0454545 -0.00167362 13 0.139403 0.113076 0.02632778 5.5589e-01 1.0243e-03 weaklyHypometh 1.0000e+00 4.5424e-02 weaklyHypometh 6.6843e-01 4.3944e-02 weaklyHypometh 1.0000e+00 6.6581e-01 insignificant -1.4760e-02 6.5822e-01 insignificant 1.0000e+00 insignificant 0.050910 0.0157162 0.04230335 15 0.102043 0.097741 0.00430175 3.2128e-04 9.9701e-01 weaklyHypermeth 2.5100e-03 1.0000e+00 weaklyHypermeth 3.7683e-04 9.8814e-01 weaklyHypermeth 4.9583e-03 1.0000e+00 weaklyHypermeth 2.8388e-02 3.6577e-01 insignificant 1.0000e+00 insignificant 0.050806 0.0454861 0.00051192 13 0.099857 0.118460 -0.01860326 6.5956e-01 1.0405e-02 inconclusive 1.0000e+00 3.7504e-01 insignificant 7.5814e-01 1.5712e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02070688 5.3497e-01 insignificant 1.0000e+00 insignificant 0.0166217 0.0454545 -0.04006077 13 0.132487 0.113076 0.0194117 9.9998e-01 5.1430e-06 weaklyHypometh 1.0000e+00 8.5570e-05 weaklyHypometh 1.0000e+00 1.4007e-03 weaklyHypometh 1.0000e+00 2.1223e-02 weaklyHypometh -0.0490951 2.4396e-01 insignificant 1.00000000 insignificant chr21 45097650 45098650 56152 SUMO3 ENSG00000184900 0.8966026 635 9 0.783078 218 9 0.720439 103 9 0.9191603 497 9 0.8698830 87 7 0.902909 403 9 0.885860 117 7 0.9128538 207 9 0.9676768 98 9 0.9460174 95 7 0.890346 391 9 0.796296 36 3 0.9437951 211 9 0.931918 68 6 0.921496 163 9 0.8000000 36 3 0.9583333 135 2 0.9173729 960 9 0.957885 242 9 0.904938 389 9 0.837019 70 6 0.7567901 146 6 0.920238 201 9 0.910095 111 9 0.8746555 303 9 0.9498785 254 9 0.784203 115 8 0.9166667 26 2 0.920365 277 9 0.8301494 217 9 0.906715 269 9 0.930619 343 9 0.9130082 207 9 0.7358420 172 9 0.6462777 427 7 1.0000000 58 4 0.7536343 129 9 0.9405167 361 9 0.733300 386 9 0.9020916 483 9 0.9464969 530 9 0.9516481 333 9 0.823822 511 9 0.9056105 0.778744 0.666885 0.9143805 0.8907827 0.9137836 0.9076858 0.9180807 0.9698540 0.9513021 0.888626 0.813472 0.9384333 0.914088 0.9041675 0.8134715 0.9386520 0.9188787 0.9691849 0.906344 0.908431 0.81721359 0.9352615 0.9490048 0.89781481 0.9520259 0.7630860 0.9249038 0.937209 0.910550 0.8860326 0.932427 0.8961301 0.8383173 0.8094155 0.9801122 0.8010091 0.9361846 0.8912354 0.8880818 0.9399040 0.9338603 0.9129235 1 0.905501 0.909910 -6.4364e-03 9 0.903503 0.911085 -0.0075820 0.84450067 3.9780e-01 insignificant 1.00000 1.0000e+00 insignificant 0.6164746 0.67290183 insignificant 1 1.00000 insignificant 0.01322681 0.5750899 insignificant 1.00000 insignificant 0.905501 0.8216136 0.07234045 9 0.903503 0.817001 0.08650231 4.2559e-03 8.7967e-01 weaklyHypermeth 2.4600e-02 1.0000e+00 weaklyHypermeth 6.6075e-01 6.6676e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.9797e-02 3.4897e-01 insignificant 1.0000e+00 insignificant 0.905501 0.9213935 -0.01809857 9 0.903503 0.922863 -0.01935984 7.5256e-01 1.4052e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.8372e-01 4.3459e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.9871e-02 6.7042e-01 insignificant 1.0000e+00 insignificant 0.909520 0.8203991 0.05889725 9 0.819977 0.735301 0.08467592 7.1999e-02 9.3652e-01 insignificant 3.2579e-01 1.0000e+00 insignificant 8.5255e-01 8.2574e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.6570e-02 4.6319e-01 insignificant 1.0000e+00 insignificant 0.909520 0.9201606 -0.01076593 9 0.819977 0.830577 -0.01060002 7.2582e-01 4.5910e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.8485e-01 4.2054e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00664456 8.8819e-01 insignificant 1.0000e+00 insignificant 0.8205318 0.9197503 -0.09728379 9 0.759364 0.755070 0.0042946 9.3044e-01 2.8407e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.0182e-01 7.4888e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0399251 5.8413e-01 insignificant 1.00000000 insignificant chr21 45140750 45141750 56157 PTTG1IP ENSG00000183255 0.9106514 528 11 0.891437 415 12 0.854509 492 12 0.9561005 613 10 0.9013578 315 10 0.813279 715 11 0.836639 337 10 0.9337009 382 10 0.7669259 397 10 0.9498509 305 10 0.921379 480 10 0.962034 216 9 0.8937031 415 10 0.930568 304 10 0.943210 477 10 0.8783654 138 8 0.9722222 40 4 0.8436311 701 10 0.786956 531 10 0.805830 421 10 0.902155 195 10 0.8318669 173 10 0.865899 318 12 0.955486 219 10 0.9442821 193 10 0.9206795 541 11 0.728837 393 10 0.6781593 321 10 0.861795 454 10 0.9331544 604 11 0.936548 441 12 0.947116 496 11 0.8568745 327 12 0.8590051 315 10 0.9409022 297 9 0.8611111 81 7 0.6777962 375 10 0.8902379 533 12 0.826960 474 10 0.8080508 467 10 0.8843944 437 10 0.8782326 421 10 0.835503 454 10 0.9163443 0.883714 0.937028 0.9424521 0.8776989 0.9155011 0.9029172 0.9346408 0.9321528 0.9430183 0.924003 0.973490 0.9271133 0.938258 0.9421047 0.9193141 0.9661969 0.8997106 0.9482921 0.919874 0.916898 0.83766013 0.9579957 0.9139773 0.91268371 0.9348782 0.8497363 0.8591803 0.857739 0.918406 0.9160311 0.927593 0.8340707 0.8524040 0.8768918 0.8169935 0.8994739 0.9206863 0.8704180 0.9351307 0.8942134 0.8775093 0.8789659 10 0.923161 0.898804 2.2255e-02 10 0.862802 0.821389 0.0414134 0.04106301 9.6923e-01 weaklyHypermeth 1.00000 1.0000e+00 insignificant 0.0839302 0.95293877 insignificant 1 1.00000 insignificant 0.01211939 0.6851057 insignificant 1.00000 insignificant 0.922862 0.8811007 0.03975884 10 0.845662 0.769147 0.07651527 5.6504e-02 7.9003e-01 insignificant 2.6528e-01 1.0000e+00 insignificant 4.8218e-01 7.2293e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.9963e-02 3.4143e-01 insignificant 1.0000e+00 insignificant 0.923161 0.8929365 0.03294240 10 0.862802 0.744394 0.11840775 1.4111e-08 9.6909e-01 weaklyHypermeth 9.4074e-07 1.0000e+00 weaklyHypermeth 1.5700e-02 9.8729e-01 weaklyHypermeth 2.5737e-01 1.0000e+00 insignificant 4.0989e-02 6.6551e-02 insignificant 6.3991e-01 insignificant 0.898804 0.8820166 0.01652234 10 0.821389 0.817219 0.00416978 5.3149e-01 4.6309e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.5941e-01 3.8467e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.7844e-02 5.4697e-01 insignificant 1.0000e+00 insignificant 0.898804 0.8929365 0.01176926 10 0.821389 0.744394 0.07699434 9.8140e-04 9.0062e-01 weaklyHypermeth 2.0446e-02 1.0000e+00 weaklyHypermeth 1.6993e-01 9.5600e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02886994 3.4938e-01 insignificant 1.0000e+00 insignificant 0.8815584 0.8925877 -0.00342949 10 0.769147 0.730018 0.0391290 6.0259e-01 9.0632e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.1022e-01 9.8465e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0010263 9.7995e-01 insignificant 1.00000000 insignificant chr21 45155550 45156550 56158 ITGB2 ENSG00000160255 0.7156746 154 6 0.694872 119 6 0.758966 153 6 0.8751751 69 5 0.7676912 71 4 0.837370 231 7 0.642174 93 5 0.8167664 158 6 0.7065010 102 6 0.6860278 126 5 0.688221 194 6 0.780769 36 3 0.5806211 200 5 0.511111 32 2 0.587740 88 4 0.7410714 29 4 0.5939394 27 2 0.5321895 126 6 0.738027 252 6 0.650096 162 6 0.935398 98 6 0.7296366 64 3 0.903059 91 6 0.695617 89 5 0.9600000 13 1 0.7222751 226 6 0.752381 135 6 0.6904762 33 4 0.890414 206 5 0.8669410 223 6 0.653386 201 7 0.842908 278 7 0.7903362 179 6 0.8040415 182 5 0.9250000 94 4 0.8708675 141 6 0.5903974 111 6 0.6932390 275 7 0.765675 106 7 0.7648023 191 6 0.4764888 90 6 0.6332483 57 5 0.714059 75 7 0.7455066 0.686794 0.632473 0.8278048 0.8576318 0.7742509 0.6415097 0.8160864 0.7673052 0.7502130 0.773564 0.815500 0.7429253 0.715261 0.7276470 0.8375120 0.5412321 0.6656347 0.7202410 0.691803 0.884756 0.74067217 0.8729642 0.7724190 0.93926451 0.7914576 0.7119943 0.7619048 0.842362 0.826348 0.6954103 0.802054 0.6795046 0.9171695 0.8816790 0.8405917 0.6886026 0.6834395 0.6478070 0.7777484 0.3646899 0.6979055 0.7231173 3 0.752073 0.807483 -5.9001e-02 5 0.636399 0.710910 -0.0745110 0.99726643 9.3032e-04 weaklyHypometh 1.00000 1.4049e-01 insignificant 0.9961147 0.00534469 weaklyHypometh 1 0.39355 insignificant -0.10829079 0.0095798 weaklyHypometh 1.00000 insignificant 0.753948 0.7861507 -0.01911205 6 0.745999 0.660706 0.08529330 6.4424e-01 2.3678e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.0540e-01 2.6379e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -8.3730e-02 1.6581e-01 insignificant 8.3324e-01 insignificant 0.756598 0.7148362 0.06529268 6 0.771641 0.718409 0.05323208 5.4883e-02 9.6036e-01 insignificant 5.1292e-01 1.0000e+00 insignificant 3.5778e-02 9.4084e-01 weaklyHypermeth 4.7077e-01 1.0000e+00 insignificant 2.4396e-02 6.9342e-01 insignificant 1.0000e+00 insignificant 0.807623 0.7869521 0.03608823 6 0.763637 0.743294 0.02034365 3.4021e-03 7.9622e-01 weaklyHypermeth 2.1001e-02 1.0000e+00 weaklyHypermeth 2.3660e-01 6.6703e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.4561e-02 6.8371e-01 insignificant 1.0000e+00 insignificant 0.809466 0.7148362 0.12790813 6 0.844157 0.718409 0.12574773 4.1036e-05 9.9997e-01 weaklyHypermeth 1.1724e-03 1.0000e+00 weaklyHypermeth 9.4736e-05 1.0000e+00 weaklyHypermeth 4.9861e-03 1.0000e+00 weaklyHypermeth 0.13268633 7.2640e-02 insignificant 8.2116e-01 insignificant 0.7883436 0.7148362 0.07366514 7 0.801860 0.718409 0.0834502 9.5286e-02 9.4767e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.9360e-02 9.9429e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.1081257 1.7635e-01 insignificant 0.84376402 insignificant chr21 45158750 45159750 56159 ITGB2 ENSG00000160255 0.9002856 211 5 0.911837 225 5 0.883603 220 5 0.9322730 282 5 0.8887090 145 5 0.888119 313 5 0.913030 197 5 0.9383392 230 5 0.8900527 312 5 0.9368092 313 5 0.922729 132 5 0.897931 143 5 0.8965449 298 5 0.910160 210 5 0.909209 378 5 0.7763636 186 5 0.8700000 55 4 0.8833753 345 5 0.923835 169 5 0.902480 188 5 0.723810 100 5 0.9007414 81 5 0.940988 177 5 0.842187 65 5 0.8577922 90 4 0.9551882 286 5 0.919828 112 5 0.8260385 122 5 0.934672 194 5 0.9508172 352 5 0.911758 263 5 0.956916 251 5 0.8874232 184 5 0.9326109 79 5 0.9821429 49 4 0.8833333 15 0 0.8456822 201 5 0.8398182 219 5 0.918336 232 5 0.9128309 231 5 0.8652064 190 5 0.9030454 194 5 0.960049 232 5 0.9004662 0.905442 0.876266 0.9357836 0.8960683 0.8849087 0.9002206 0.9287106 0.8909744 0.9299429 0.915544 0.870164 0.8945507 0.908920 0.9034410 0.7746082 0.8376437 0.8797406 0.9119897 0.889585 0.720409 0.87258466 0.9474402 0.8309985 0.86720966 0.9529558 0.9084093 0.7936135 0.924905 0.951569 0.9057276 0.961880 0.9073078 0.9488111 0.9573236 0.8694923 0.8636638 0.8840619 0.9183723 0.9245946 0.8729552 0.9081111 0.9526888 5 0.900264 0.912046 -1.2358e-02 5 0.902180 0.914117 -0.0119370 0.93797115 1.8795e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9025351 0.23237042 insignificant 1 1.00000 insignificant 0.00538966 0.8059535 lowCoverage 1.00000 lowCoverage 0.900264 0.8741633 0.02538088 5 0.902180 0.869394 0.03278587 1.2373e-04 6.9526e-03 weaklyHypermeth 9.0976e-04 2.0449e-01 weaklyHypermeth 5.1327e-01 3.5197e-03 inconclusive 1.0000e+00 1.6760e-01 insignificant 3.6158e-03 8.8217e-01 lowCoverage 1.0000e+00 lowCoverage 0.900264 0.9156627 -0.01587645 5 0.902180 0.915643 -0.01346306 7.2351e-01 1.0058e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.0235e-01 7.1791e-02 insignificant 1.0000e+00 9.0875e-01 insignificant -1.3109e-02 4.6979e-01 lowCoverage 1.0000e+00 lowCoverage 0.912046 0.8741633 0.03770585 5 0.914117 0.869394 0.04472290 1.6184e-03 4.8013e-01 weaklyHypermeth 1.0927e-02 1.0000e+00 weaklyHypermeth 5.5118e-01 9.5290e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -1.7738e-03 9.5361e-01 lowCoverage 1.0000e+00 lowCoverage 0.912046 0.9156627 -0.00372509 5 0.914117 0.915643 -0.00152603 5.3855e-01 6.5783e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.6818e-01 6.0618e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01849896 4.7490e-01 lowCoverage 1.0000e+00 lowCoverage 0.8741633 0.9156627 -0.04141228 5 0.869394 0.915643 -0.0462489 2.2136e-01 4.6186e-02 weaklyHypometh 1.0000e+00 2.5517e-01 insignificant 1.5748e-01 5.5593e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0167251 5.4956e-01 lowCoverage 1.00000000 lowCoverage chr21 45256850 45257850 56162 C21orf70 ENSG00000160256 0.6794038 304 6 0.492252 176 6 0.665257 152 6 0.4006125 162 6 0.6560484 67 4 0.588363 293 6 0.702802 115 6 0.6943652 130 6 0.5009974 195 6 0.6360119 140 6 0.698549 252 6 0.657623 68 4 0.6304095 210 6 0.543771 50 3 0.634422 168 6 0.3066378 55 5 0.5216216 67 5 0.6824997 264 6 0.589123 233 6 0.568177 270 6 0.758102 92 5 0.6897436 78 4 0.570868 151 6 0.522298 75 5 0.6174603 65 5 0.6305484 209 6 0.461356 143 6 0.6081871 73 6 0.727397 171 6 0.5462020 237 6 0.673363 199 6 0.770819 316 6 0.7107639 161 6 0.6471306 153 6 0.8333333 128 3 0.6084297 58 5 0.7495263 110 6 0.6353769 213 6 0.677927 211 6 0.6080614 250 6 0.6285584 177 6 0.6055211 347 6 0.740255 189 6 0.5038183 0.322338 0.456682 0.4060407 0.4433499 0.5579161 0.4690088 0.4982709 0.3364508 0.4521383 0.543148 0.515966 0.4059317 0.474392 0.4139886 0.2843323 0.3790572 0.4765742 0.4233724 0.360606 0.578408 0.42923077 0.4850558 0.4017110 0.46708128 0.3868311 0.3188656 0.3478408 0.621937 0.320867 0.4504672 0.681639 0.4723958 0.4337701 0.5500000 0.3323394 0.4873222 0.4194077 0.4470146 0.4065082 0.4297036 0.3833632 0.5580001 4 0.527003 0.561083 -2.8875e-02 6 0.472915 0.550718 -0.0778033 0.99962714 2.6827e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9763043 0.34833740 insignificant 1 1.00000 insignificant -0.03891473 0.2971924 insignificant 1.00000 insignificant 0.527646 0.6500608 -0.06869626 6 0.626039 0.686636 -0.06059691 5.2162e-04 2.6107e-08 weaklyHypometh 3.4775e-03 1.8648e-06 weaklyHypometh 3.8998e-02 1.0620e-06 weaklyHypometh 2.4840e-01 8.1696e-05 weaklyHypometh -1.0498e-01 3.0441e-02 weaklyHypometh 2.4549e-01 insignificant 0.527786 0.5689949 -0.00905687 6 0.679462 0.628724 0.05073807 3.6165e-01 9.0081e-02 insignificant 1.0000e+00 9.4823e-01 insignificant 3.8695e-01 6.6878e-02 insignificant 1.0000e+00 8.7998e-01 insignificant -5.9617e-02 1.1315e-01 insignificant 8.2694e-01 insignificant 0.561841 0.6500608 -0.03713234 6 0.659410 0.686636 -0.02722524 9.3179e-02 3.3011e-04 weaklyHypometh 4.0337e-01 2.0632e-02 weaklyHypometh 1.6794e-01 1.2311e-03 weaklyHypometh 7.9215e-01 8.7938e-02 weaklyHypometh -6.6065e-02 1.6310e-01 insignificant 8.4947e-01 insignificant 0.561841 0.5691126 0.01384303 6 0.659410 0.650178 0.00923275 2.4350e-01 4.9076e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.8606e-01 5.1892e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02070267 5.9365e-01 insignificant 1.0000e+00 insignificant 0.6500608 0.5691126 0.04330246 6 0.686636 0.650178 0.0364580 2.8373e-03 4.6936e-01 weaklyHypermeth 1.4187e-01 1.0000e+00 insignificant 2.7123e-03 3.9197e-01 weaklyHypermeth 1.9991e-01 1.0000e+00 insignificant 0.0453621 3.1917e-01 insignificant 1.00000000 insignificant chr21 45499350 45500350 56177 C21orf89 ENSG00000182586 0.9470156 280 8 0.889054 188 7 0.899594 213 7 0.9851414 177 7 0.9239661 207 7 0.968759 163 8 0.962837 249 7 0.9295027 166 5 0.9360599 164 7 0.9631323 222 7 0.882582 200 7 0.928523 201 7 0.9294295 181 7 1.000000 33 3 0.948810 222 7 0.8655462 149 7 0.8988636 129 4 0.8979279 443 7 0.977527 206 7 0.950037 232 8 0.741544 50 4 0.8210526 127 5 0.903417 134 8 0.902473 43 5 0.8380124 269 7 0.9723727 249 8 0.886508 91 5 0.7442857 74 4 0.928393 182 6 0.9768305 264 8 0.976638 237 7 0.980512 281 8 0.7976496 204 7 0.9165682 169 7 0.6130952 37 4 0.9029685 96 7 0.7432466 127 7 0.7260366 243 7 0.952282 266 8 0.9743654 205 8 0.9061287 165 7 0.9626488 191 7 0.990000 146 8 0.9394589 0.871439 0.907316 0.9836578 0.9114015 0.9596285 0.9504421 0.9225574 0.9289847 0.9561474 0.878705 0.940491 0.9375592 0.956755 0.9489274 0.8861386 0.9170825 0.8960680 0.9785981 0.965759 0.861037 0.82475067 0.8875844 0.9194232 0.94812533 0.9712835 0.9064081 0.7549175 0.916086 0.976607 0.9719907 0.978611 0.7870867 0.9208892 0.7512800 0.9237238 0.8619272 0.7928342 0.9476850 0.9668241 0.9264519 0.9670321 0.9897030 4 0.933648 0.946027 -1.1031e-02 8 0.946266 0.844293 0.1019722 0.97066560 8.0595e-02 insignificant 1.00000 9.7103e-01 insignificant 0.7086194 0.71302516 insignificant 1 1.00000 insignificant 0.04487893 0.1112730 insignificant 1.00000 insignificant 0.933632 0.8378995 0.08920352 8 0.940295 0.800206 0.14008940 2.3851e-11 9.9972e-01 weaklyHypermeth 3.4073e-10 1.0000e+00 weaklyHypermeth 6.3789e-05 9.9959e-01 weaklyHypermeth 8.9843e-04 1.0000e+00 weaklyHypermeth 1.5095e-01 2.2923e-02 weaklyHypermeth 1.9426e-01 insignificant 0.933615 0.9650565 -0.02917494 8 0.932832 0.964440 -0.03160798 9.9981e-01 8.8313e-03 weaklyHypometh 1.0000e+00 2.1490e-01 insignificant 9.9886e-01 1.5655e-02 weaklyHypometh 1.0000e+00 3.8125e-01 insignificant -2.2870e-02 2.0617e-01 insignificant 1.0000e+00 insignificant 0.946500 0.8378995 0.10501879 8 0.938104 0.800206 0.13789803 4.8140e-10 9.9984e-01 weaklyHypermeth 7.5219e-09 1.0000e+00 weaklyHypermeth 2.8468e-03 9.7956e-01 weaklyHypermeth 2.7639e-02 1.0000e+00 weaklyHypermeth 1.0608e-01 8.1507e-02 insignificant 5.0626e-01 insignificant 0.946734 0.9650565 -0.01849684 8 0.942867 0.964440 -0.02157327 9.3352e-01 2.3055e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9222e-01 3.1686e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.06774856 3.2560e-02 weaklyHypometh 5.7123e-01 insignificant 0.8384880 0.9650565 -0.11781580 8 0.816898 0.964440 -0.1475419 1.0000e+00 3.5931e-07 weaklyHypometh 1.0000e+00 7.6448e-06 weaklyHypometh 9.9933e-01 4.5178e-04 weaklyHypometh 1.0000e+00 8.6881e-03 weaklyHypometh -0.1738243 1.2531e-02 weaklyHypometh 0.14674873 insignificant chr21 45536650 45537650 56178 ENSG00000215447 0.7497325 304 10 0.556000 187 11 0.497782 205 10 0.6242578 289 11 0.6463117 164 6 0.686869 387 10 0.684454 222 9 0.7529565 232 10 0.5586464 175 9 0.5877596 269 9 0.633622 324 11 0.592627 118 9 0.7291431 245 10 0.731464 117 5 0.739862 199 8 0.4748677 42 4 0.4942857 33 4 0.7860031 330 10 0.740035 325 10 0.590424 326 11 0.671725 184 11 0.5843145 227 11 0.616092 204 11 0.623994 160 10 0.6450481 241 11 0.6444179 266 11 0.673407 252 11 0.6956206 98 8 0.663399 256 8 0.6579417 306 11 0.519915 259 11 0.730382 346 11 0.4433096 256 12 0.5783498 198 11 0.3731061 263 11 0.4529762 147 9 0.4426650 227 8 0.4989511 293 12 0.663644 392 10 0.6441719 248 11 0.7115058 173 9 0.7898044 271 10 0.613983 335 11 0.7345591 0.547447 0.502639 0.5623925 0.5325346 0.6025175 0.6876477 0.6095144 0.5281738 0.6282671 0.656958 0.605030 0.6962296 0.604552 0.7195774 0.5194496 0.5446052 0.7027947 0.6430654 0.469774 0.638482 0.49117881 0.5912853 0.5923541 0.58925172 0.5878052 0.7004637 0.6781935 0.594892 0.631292 0.4715418 0.652754 0.3515721 0.6433036 0.2759441 0.4436923 0.4046116 0.4913506 0.6167534 0.5653575 0.5957222 0.7200537 0.5171943 5 0.652639 0.672026 1.2390e-02 10 0.652559 0.624836 0.0277231 0.07295833 8.6870e-01 insignificant 1.00000 1.0000e+00 insignificant 0.2722116 0.91045926 insignificant 1 1.00000 insignificant -0.00099949 0.9703411 insignificant 1.00000 insignificant 0.652716 0.5419075 0.15465908 10 0.677376 0.494556 0.18282050 1.8174e-16 9.7681e-01 weaklyHypermeth 3.8667e-15 1.0000e+00 weaklyHypermeth 1.6016e-06 9.9106e-01 weaklyHypermeth 3.2685e-05 1.0000e+00 weaklyHypermeth 1.7796e-01 3.2451e-04 weaklyHypermeth 6.1521e-03 weaklyHypermeth 0.653330 0.6518675 -0.00869214 10 0.667723 0.666924 0.00079954 6.0419e-01 1.8526e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.0506e-01 9.6421e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -4.1767e-02 2.9611e-01 insignificant 1.0000e+00 insignificant 0.672026 0.5415763 0.12922544 11 0.624836 0.455676 0.16916047 3.6783e-14 4.7620e-01 weaklyHypermeth 8.5541e-13 1.0000e+00 weaklyHypermeth 1.2808e-05 8.2244e-01 weaklyHypermeth 2.6683e-04 1.0000e+00 weaklyHypermeth 1.7896e-01 4.7139e-04 weaklyHypermeth 8.5708e-03 weaklyHypermeth 0.673733 0.6518675 -0.02685462 10 0.645656 0.666924 -0.02126818 8.2856e-01 1.5655e-03 weaklyHypometh 1.0000e+00 1.3046e-01 insignificant 7.1563e-01 7.7987e-03 weaklyHypometh 1.0000e+00 5.1991e-01 insignificant -0.04076705 2.8033e-01 insignificant 1.0000e+00 insignificant 0.5416969 0.6518675 -0.15095271 10 0.451982 0.666924 -0.2149420 9.9997e-01 1.6766e-07 weaklyHypometh 1.0000e+00 3.8991e-06 weaklyHypometh 1.0000e+00 3.7143e-05 weaklyHypometh 1.0000e+00 1.3652e-03 weaklyHypometh -0.2197288 5.7511e-04 hypomethylated 0.01513454 hypomethylated chr21 45543450 45544450 56179 ENSG00000215447 0.9888889 56 4 0.895630 112 3 0.577778 29 3 0.9576083 125 5 0.9619048 65 3 0.960648 62 4 0.807456 65 3 0.7969622 91 3 1.0000000 14 0 0.7777778 9 0 0.975125 173 3 0.806061 31 3 1.0000000 25 3 0.811111 16 3 1.000000 37 3 1.0000000 27 3 NA 0 0 0.8564815 29 2 1.000000 18 1 0.976190 47 3 0.714286 21 3 0.8571429 21 3 0.966667 28 5 0.933333 35 3 0.8000000 29 3 0.9272515 126 5 0.830000 24 3 1.0000000 17 3 1.000000 13 0 0.9935874 164 3 0.982004 171 3 0.956619 94 5 0.5303030 38 3 0.9777778 31 3 1.0000000 24 2 0.7666667 70 2 0.6902778 58 3 0.7470238 77 5 0.902778 35 3 0.9293788 108 6 0.9154040 41 3 0.8750000 7 0 0.860004 116 6 0.9777778 0.826050 0.962963 0.9677419 0.9365079 0.9583333 0.9482456 0.8838259 1.0000000 0.7777778 0.958542 0.806061 1.0000000 0.811111 1.0000000 1.0000000 NA 0.8796296 1.0000000 0.952381 0.714286 0.85714286 1.0000000 1.0000000 1.00000000 0.9824561 0.8000000 1.0000000 1.000000 0.987175 0.9700060 0.984127 0.8838384 0.9629630 NA NA 0.9439815 0.8888889 0.8888889 0.9532020 0.9419192 NA 0.8735165 0 0.929126 0.956931 -2.9530e-02 3 0.923993 0.940306 -0.0163129 0.62355295 1.6418e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.4423168 0.54813388 lowCoverage 1 1.00000 lowCoverage -0.01079571 0.7754849 lowCoverage 1.00000 lowCoverage 0.928225 0.8851351 0.03520180 3 0.791994 0.717282 0.07471188 1.5087e-01 8.4812e-01 lowCoverage 6.0592e-01 1.0000e+00 lowCoverage 1.1578e-01 9.4611e-01 lowCoverage 6.2153e-01 1.0000e+00 lowCoverage 1.1727e-01 1.7780e-01 lowCoverage 8.8019e-01 lowCoverage 0.929126 0.9022801 0.01867726 3 0.923993 0.898583 0.02541003 1.4081e-01 8.8668e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 4.7304e-02 9.9616e-01 lowCoverage 5.8400e-01 1.0000e+00 lowCoverage 6.0989e-03 8.3675e-01 lowCoverage 1.0000e+00 lowCoverage 0.956931 0.8881356 0.05757353 3 0.940306 0.836829 0.10347680 3.7902e-02 7.2610e-01 lowCoverage 1.8222e-01 1.0000e+00 lowCoverage 1.0533e-01 8.7091e-01 lowCoverage 5.5147e-01 1.0000e+00 lowCoverage 1.2807e-01 1.4674e-01 lowCoverage 8.0188e-01 lowCoverage 0.956931 0.9022801 0.04705683 3 0.940306 0.898583 0.04172298 1.6052e-02 9.8706e-01 lowCoverage 1.8240e-01 1.0000e+00 lowCoverage 3.6717e-02 9.9616e-01 lowCoverage 4.7409e-01 1.0000e+00 lowCoverage 0.01689458 5.7688e-01 lowCoverage 1.0000e+00 lowCoverage 0.8881356 0.9022801 -0.01066467 5 0.836829 0.898583 -0.0617538 1.8688e-01 3.2034e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.8325e-01 3.9833e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.1111714 1.8959e-01 lowCoverage 0.88182019 lowCoverage chr21 45552150 45553150 56180 C21orf93 ENSG00000184274 0.7427272 327 11 0.805066 184 10 0.557708 240 10 0.8608115 412 10 0.7416795 92 9 0.858688 412 11 0.790082 140 7 0.8698565 206 9 0.9000291 135 6 0.8335062 150 6 0.888914 387 11 0.594610 81 4 0.7453927 213 6 0.723718 114 6 0.699671 168 8 0.5850890 75 4 0.5496324 35 3 0.5557353 575 9 0.786172 223 7 0.817112 323 11 0.907164 133 9 0.8154915 166 6 0.732740 217 10 0.865702 150 7 0.7658776 195 6 0.7534088 303 11 0.567801 192 8 0.8054952 132 8 0.749657 217 10 0.8084425 388 11 0.806864 310 11 0.875945 420 11 0.4138649 293 11 0.4084901 189 7 0.4038213 221 6 0.4311137 143 5 0.4379641 262 12 0.4163170 474 11 0.680935 250 6 0.8298110 253 7 0.6778669 283 7 0.6987857 251 6 0.727121 221 7 0.7706315 0.747002 0.591675 0.8488651 0.8852393 0.8048837 0.8112797 0.7753838 0.8498987 0.8604109 0.894249 0.791268 0.6742056 0.774589 0.7676526 0.8096446 0.7968844 0.6112093 0.7202272 0.727664 0.864277 0.60594021 0.8534081 0.8746201 0.77177518 0.7349839 0.7284967 0.8284768 0.782343 0.776545 0.7545018 0.838882 0.2473967 0.2068232 0.4855555 0.2061954 0.4976889 0.1791268 0.6650834 0.7485338 0.7410620 0.6872181 0.6131214 4 0.781167 0.810773 -2.6400e-02 11 0.638988 0.599624 0.0393632 0.99664606 1.5076e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9875784 0.67295283 insignificant 1 1.00000 insignificant -0.04257236 0.2548829 insignificant 1.00000 insignificant 0.781417 0.3331226 0.41419243 11 0.656361 0.352149 0.30421255 2.5759e-29 1.0000e+00 hypermethylated 1.2266e-27 1.0000e+00 hypermethylated 1.6354e-10 1.0000e+00 hypermethylated 9.6199e-09 1.0000e+00 hypermethylated 3.2671e-01 8.8885e-11 hypermethylated 1.2698e-08 hypermethylated 0.783311 0.6987281 0.06521305 7 0.721555 0.711946 0.00960925 2.8452e-01 2.1829e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.8621e-01 5.7195e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.2406e-02 5.7254e-01 insignificant 1.0000e+00 insignificant 0.811348 0.3331226 0.44217530 11 0.674577 0.352149 0.32242894 4.7972e-29 1.0000e+00 hypermethylated 2.6651e-27 1.0000e+00 hypermethylated 2.2246e-09 1.0000e+00 hypermethylated 1.3086e-07 1.0000e+00 hypermethylated 3.6929e-01 7.0267e-09 hypermethylated 8.7833e-07 hypermethylated 0.811656 0.6987281 0.09392870 7 0.713803 0.711946 0.00185655 5.6115e-03 4.0859e-01 weaklyHypermeth 7.4820e-02 1.0000e+00 weaklyHypermeth 3.8401e-02 6.5285e-01 weaklyHypermeth 4.7409e-01 1.0000e+00 insignificant 0.06497861 1.1495e-01 insignificant 1.0000e+00 insignificant 0.3339683 0.6984885 -0.36996672 7 0.394952 0.689788 -0.2948363 1.0000e+00 5.0748e-15 hypomethylated 1.0000e+00 2.8194e-13 hypomethylated 1.0000e+00 4.1800e-06 hypomethylated 1.0000e+00 1.9905e-04 hypomethylated -0.3043086 3.0262e-04 hypomethylated 0.01087374 hypomethylated chr21 45574050 45575050 56183 C21orf93 ENSG00000184274 0.7566030 607 19 0.543358 631 19 0.520598 680 19 0.7050952 506 17 0.4298435 316 19 0.789449 683 19 0.458264 643 19 0.5347147 441 19 0.5061375 456 19 0.5723815 407 18 0.678154 757 19 0.496949 359 17 0.4064580 572 17 0.898534 126 11 0.676797 421 17 0.5497328 251 14 0.2511617 237 10 0.6125885 549 19 0.380823 652 17 0.686467 530 19 0.579836 240 15 0.6766204 157 11 0.720362 385 18 0.649125 278 18 0.6429561 314 15 0.5989023 707 19 0.639480 393 17 0.4229995 210 15 0.597223 543 17 0.5810462 774 19 0.634272 656 19 0.797192 754 19 0.5389138 429 19 0.4825046 495 19 0.3266254 408 11 0.7148101 133 10 0.5193209 361 18 0.6883780 744 19 0.734090 485 19 0.6577795 554 19 0.6947847 466 18 0.5467852 411 15 0.691994 480 18 0.6904059 0.504577 0.503236 0.6340209 0.3319659 0.7462315 0.4032078 0.4886238 0.4430056 0.4667423 0.624653 0.422473 0.3112008 0.648503 0.6011877 0.5063118 0.3288085 0.5828397 0.3069903 0.550154 0.548160 0.59942778 0.7173048 0.6218508 0.58458792 0.5750495 0.5685041 0.4871211 0.591169 0.489375 0.5743207 0.766229 0.4613181 0.3528808 0.3425613 0.5675001 0.4673698 0.5691827 0.6328531 0.5685743 0.6089425 0.4965969 0.5969638 9 0.563136 0.653163 -8.2539e-02 19 0.619356 0.628052 -0.0086958 0.99999998 2.0708e-04 weaklyHypometh 1.00000 6.9027e-02 weaklyHypometh 0.9999833 0.00090496 weaklyHypometh 1 0.23179 insignificant -0.05562889 0.2090154 insignificant 1.00000 insignificant 0.563105 0.4996103 0.04272095 19 0.630207 0.526343 0.10386365 3.4749e-05 2.4111e-03 weaklyHypermeth 2.8023e-04 9.6443e-02 weaklyHypermeth 2.0251e-03 4.3916e-03 weaklyHypermeth 1.8926e-02 1.8298e-01 weaklyHypermeth 2.7613e-02 6.9337e-01 insignificant 1.0000e+00 insignificant 0.562914 0.6310518 -0.07678513 19 0.580852 0.680419 -0.09956750 9.7223e-01 3.2917e-05 weaklyHypometh 1.0000e+00 2.9925e-03 weaklyHypometh 9.8310e-01 1.3078e-05 weaklyHypometh 1.0000e+00 2.3077e-03 weaklyHypometh -9.2381e-02 6.9485e-02 insignificant 6.4939e-01 insignificant 0.652914 0.4996109 0.12022062 19 0.611881 0.525198 0.08668256 1.3725e-07 3.2569e-01 weaklyHypermeth 1.6340e-06 1.0000e+00 weaklyHypermeth 4.5397e-04 1.9490e-01 weaklyHypermeth 5.6746e-03 1.0000e+00 weaklyHypermeth 8.3242e-02 2.3247e-01 insignificant 1.0000e+00 insignificant 0.653875 0.6310071 0.00414193 19 0.678663 0.681107 -0.00244428 2.5147e-01 1.3475e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.7357e-01 2.4641e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03675239 3.9377e-01 insignificant 1.0000e+00 insignificant 0.5007812 0.6310071 -0.11550341 19 0.578978 0.681107 -0.1021292 7.3378e-01 3.7332e-06 weaklyHypometh 1.0000e+00 6.4366e-05 weaklyHypometh 8.1452e-01 4.2293e-03 weaklyHypometh 1.0000e+00 5.0956e-02 weaklyHypometh -0.1199947 1.1035e-01 insignificant 0.64204436 insignificant chr21 45604350 45605350 56184 C21orf93 ENSG00000184274 0.5830026 187 7 0.564856 121 6 0.706111 92 7 0.6893656 190 7 0.7430769 62 5 0.637673 133 6 0.628887 78 4 0.7848725 86 7 0.5916446 73 4 0.7417712 65 4 0.688903 173 7 0.666538 41 2 0.6178451 55 7 0.755000 40 1 0.591919 61 2 0.4842593 34 4 0.8030303 14 1 0.8220599 121 7 0.797222 69 2 0.613928 66 2 0.788636 53 5 0.8100000 28 1 0.698316 82 9 0.634659 53 6 0.8358189 161 6 0.7469162 109 7 0.764286 51 5 0.6215278 34 2 0.625595 58 4 0.6108501 109 7 0.824985 139 7 0.885417 86 5 0.6424603 82 7 0.8868488 83 7 0.6049062 134 7 0.7113636 61 1 0.7188384 84 8 0.7323232 100 7 0.590584 147 7 0.7524752 151 8 0.7754444 175 7 0.5488863 109 7 0.810481 164 7 0.8333895 0.784467 0.626741 0.7943456 0.7742824 0.7692998 0.7076136 0.7969204 0.7461268 0.8737484 0.776879 0.721096 0.7757802 0.834437 0.7044324 0.5967040 0.7607582 0.8097778 0.8393657 0.689796 0.924440 0.59737220 0.7736318 0.7459294 0.85964409 0.7859019 0.8863006 0.8277363 0.815965 0.706245 0.8489307 0.879975 0.8100213 0.8964581 0.7966337 0.5915875 0.8860131 0.7513569 0.5875538 0.6063043 0.6080703 0.5256889 0.7707657 1 0.763398 0.792316 -2.2450e-02 5 0.635884 0.577621 0.0582628 0.63681950 2.3481e-01 insignificant 1.00000 1.0000e+00 insignificant 0.6832526 0.06405994 insignificant 1 1.00000 insignificant -0.06165234 0.0888801 lowCoverage 1.00000 lowCoverage 0.764404 0.7647059 0.01429583 5 0.664651 0.568633 0.09601827 2.4796e-01 8.6831e-01 insignificant 9.3219e-01 1.0000e+00 insignificant 4.0285e-01 4.2633e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -4.0525e-02 3.9197e-01 lowCoverage 1.0000e+00 lowCoverage 0.767108 0.6416107 0.12592081 5 0.656414 0.759360 -0.10294602 1.7497e-03 8.6178e-02 weaklyHypermeth 2.7589e-02 9.3674e-01 weaklyHypermeth 1.6918e-01 1.0118e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -1.9976e-02 7.3749e-01 lowCoverage 1.0000e+00 lowCoverage 0.793535 0.7661142 0.03366472 7 0.618335 0.616019 0.00231634 3.3130e-01 8.2854e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.0828e-01 8.5688e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.1127e-02 6.7203e-01 insignificant 1.0000e+00 insignificant 0.799370 0.6416107 0.17559418 5 0.714952 0.759360 -0.04440816 2.8401e-02 3.9673e-02 weaklyHypermeth 2.8120e-01 7.7341e-01 insignificant 1.2806e-01 2.0871e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.04167658 5.0846e-01 insignificant 1.0000e+00 insignificant 0.7775701 0.6405405 0.16475522 5 0.739223 0.755296 -0.0160730 5.4624e-01 5.0618e-02 insignificant 1.0000e+00 2.7660e-01 insignificant 4.5578e-01 2.9517e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0205494 7.6332e-01 insignificant 1.00000000 insignificant chr21 45609550 45610550 56186 C21orf93 ENSG00000184274 0.8527184 254 11 0.623472 285 13 0.852887 482 13 0.8190898 341 8 0.8773675 344 12 0.855413 294 11 0.648340 411 12 0.7266574 225 13 0.6882713 327 13 0.8314310 237 11 0.854246 374 13 0.826801 357 11 0.6089778 315 12 0.851852 19 2 0.793724 248 12 0.7731144 282 10 0.5547138 332 11 0.8143681 310 9 0.700631 398 13 0.878097 249 11 0.869956 174 12 0.7740132 94 5 0.869603 186 11 0.901025 157 11 0.8160506 92 7 0.8104949 314 13 0.844052 228 13 0.7874211 101 10 0.783253 272 12 0.8050067 350 12 0.878870 297 13 0.875898 283 10 0.9673193 306 13 0.8839870 362 13 0.9934829 412 11 0.8222222 64 4 0.8989674 204 13 0.8293020 250 13 0.860888 195 8 0.8544348 213 8 0.7751757 226 6 0.7647163 215 7 0.897688 254 8 0.8495635 0.713626 0.884503 0.9063380 0.9006341 0.8980220 0.7001808 0.7641462 0.8097981 0.9019064 0.838180 0.824212 0.5850638 0.889841 0.8049909 0.8055379 0.6495392 0.7993903 0.8287593 0.902827 0.912246 0.87071607 0.8274090 0.8445767 0.86522094 0.8682467 0.8589261 0.8104142 0.868648 0.846171 0.8939810 0.885737 0.9553288 0.9277673 0.9928197 0.8340667 0.9517039 0.9559641 0.9050826 0.9043872 0.8547712 0.7925749 0.9216126 6 0.741410 0.822214 -6.0770e-02 12 0.780089 0.824627 -0.0445380 0.99746594 7.1296e-04 weaklyHypometh 1.00000 1.4049e-01 insignificant 0.9992488 0.00046588 weaklyHypometh 1 0.23179 insignificant -0.06302830 0.0209540 weaklyHypometh 1.00000 insignificant 0.741368 0.9305382 -0.17652859 12 0.764381 0.881850 -0.11746954 9.9998e-01 5.9355e-13 weaklyHypometh 1.0000e+00 5.3959e-11 weaklyHypometh 1.0000e+00 4.2147e-11 weaklyHypometh 1.0000e+00 7.0246e-09 weaklyHypometh -1.2760e-01 4.3909e-03 weaklyHypometh 5.0470e-02 weaklyHypometh 0.741368 0.9211242 -0.07670686 7 0.764381 0.833778 -0.06939705 9.9539e-01 1.2536e-03 weaklyHypometh 1.0000e+00 5.2231e-02 weaklyHypometh 9.9981e-01 1.5130e-03 weaklyHypometh 1.0000e+00 7.6957e-02 weaklyHypometh -5.8972e-02 1.1333e-01 insignificant 8.2694e-01 insignificant 0.821934 0.9305382 -0.10927074 13 0.812100 0.881850 -0.06975025 1.0000e+00 9.6976e-11 weaklyHypometh 1.0000e+00 8.8160e-09 weaklyHypometh 1.0000e+00 3.2418e-06 weaklyHypometh 1.0000e+00 3.2418e-04 weaklyHypometh -6.4577e-02 7.7747e-02 insignificant 4.8898e-01 insignificant 0.821934 0.9211242 -0.03941134 8 0.812100 0.833778 -0.02167776 8.1230e-01 2.9022e-03 weaklyHypometh 1.0000e+00 1.8139e-01 insignificant 9.7006e-01 3.9253e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 0.00405650 8.9256e-01 insignificant 1.0000e+00 insignificant 0.9305382 0.9211242 0.05764782 8 0.881850 0.833778 0.0480725 3.4849e-04 9.9804e-01 weaklyHypermeth 2.1780e-02 1.0000e+00 weaklyHypermeth 1.3707e-02 9.9633e-01 weaklyHypermeth 6.8536e-01 1.0000e+00 insignificant 0.0686331 1.0902e-01 insignificant 0.64204436 insignificant chr21 45627550 45628550 56188 ENSG00000217185 0.7196452 318 15 0.737229 167 10 0.806137 259 10 0.7206451 286 16 0.4999899 74 6 0.832833 452 15 0.602636 121 9 0.7039738 199 10 0.6333530 178 9 0.6625778 209 10 0.829454 320 10 0.652778 100 4 0.7309567 228 10 0.825921 87 5 0.551928 214 10 0.5625000 96 6 0.7000000 30 1 0.7347772 266 11 0.846653 223 15 0.777661 303 11 0.821368 126 9 0.8287550 141 9 0.658398 210 15 0.706694 116 9 0.7769974 115 9 0.7984507 297 10 0.644009 200 10 0.6372863 104 8 0.813748 213 10 0.7677206 317 10 0.729003 303 10 0.721831 404 10 0.7798495 185 10 0.6828692 280 10 0.9062108 292 12 0.7280859 237 13 0.7741342 102 6 0.8780515 411 17 0.780833 247 14 0.8276013 349 15 0.6789660 258 10 0.8448747 225 14 0.684323 316 15 0.7536339 0.677603 0.712096 0.7200710 0.5168993 0.8051676 0.6166599 0.7401256 0.6122040 0.6701992 0.761014 0.646047 0.7796485 0.779637 0.6267154 0.4380067 0.8225758 0.6952698 0.7500713 0.705087 0.784011 0.72540368 0.7247026 0.6821571 0.72118843 0.7844640 0.7624777 0.7646283 0.718261 0.681849 0.6912533 0.776335 0.7989966 0.6431461 0.9478543 0.7284802 0.8680252 0.7853501 0.7282963 0.8192093 0.6360815 0.6879016 0.7453659 5 0.724455 0.770923 -2.1953e-02 10 0.705897 0.670992 0.0349047 0.60345370 3.9800e-01 insignificant 1.00000 1.0000e+00 insignificant 0.8875471 0.31737014 insignificant 1 1.00000 insignificant -0.03543926 0.2488712 insignificant 1.00000 insignificant 0.725504 0.7796948 -0.03752298 10 0.740431 0.812575 -0.07214413 8.0403e-01 3.1128e-04 weaklyHypometh 1.0000e+00 1.5564e-02 weaklyHypometh 9.9497e-01 2.7407e-03 weaklyHypometh 1.0000e+00 1.4425e-01 insignificant -8.4951e-02 7.0031e-02 insignificant 4.6378e-01 insignificant 0.724138 0.7591398 -0.02179968 10 0.726486 0.782674 -0.05618741 9.6780e-01 4.2178e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4604e-01 6.0465e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -5.6737e-02 2.1050e-01 insignificant 1.0000e+00 insignificant 0.772367 0.7796948 -0.00245044 10 0.687026 0.812575 -0.12554931 8.6377e-01 6.8264e-04 weaklyHypometh 1.0000e+00 4.0155e-02 weaklyHypometh 9.9567e-01 2.5921e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -4.9512e-02 2.5394e-01 insignificant 1.0000e+00 insignificant 0.770324 0.7591398 0.00270366 10 0.644341 0.782674 -0.13833259 8.8903e-01 2.2058e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.3217e-01 8.2935e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02129800 6.1424e-01 insignificant 1.0000e+00 insignificant 0.7795485 0.7587940 0.00690019 15 0.802163 0.758526 0.0436362 4.7911e-03 7.9853e-01 weaklyHypermeth 1.9963e-01 1.0000e+00 insignificant 4.9081e-02 9.8586e-01 weaklyHypermeth 1.0000e+00 1.0000e+00 insignificant 0.0282138 5.8298e-01 insignificant 1.00000000 insignificant chr21 45675050 45676050 56191 NCRNA00175 ENSG00000183535 0.5525312 422 15 0.573705 409 15 0.682159 691 17 0.5267068 475 17 0.5944089 737 17 0.717402 481 17 0.591793 522 17 0.5911770 586 15 0.6244742 563 17 0.6457448 700 17 0.793291 949 17 0.697935 596 17 0.4292203 896 17 0.552889 335 11 0.445004 1228 18 0.6526204 518 8 0.3992884 729 7 0.3871736 487 13 0.470964 1076 17 0.425396 412 17 0.572779 255 18 0.1970016 303 18 0.617998 385 17 0.514673 274 19 0.3988437 158 10 0.4460137 945 17 0.506512 365 17 0.4589575 202 15 0.633987 665 17 0.3931782 873 17 0.429639 781 17 0.838385 406 15 0.7779874 252 15 0.6235714 594 17 0.7483333 392 12 0.7861111 74 4 0.6693331 415 19 0.7603380 529 17 0.452683 549 16 0.3255533 501 18 0.3855210 301 14 0.2727616 500 14 0.558291 412 16 0.5227767 0.448428 0.599893 0.4847642 0.5490063 0.6472092 0.6023586 0.5085826 0.5579461 0.5518457 0.756191 0.664642 0.3100833 0.548887 0.3509564 0.6886726 0.4011457 0.4130349 0.4127748 0.300873 0.649194 0.15612109 0.5968377 0.5686976 0.35628064 0.3288178 0.4189280 0.5837881 0.565643 0.312933 0.4012162 0.814046 0.8379614 0.7891448 0.8229074 0.7427411 0.8227223 0.7568794 0.4185725 0.2620396 0.4173357 0.2592249 0.5151146 11 0.608960 0.522986 4.6135e-02 17 0.568282 0.475288 0.0929946 0.00195667 9.9494e-01 weaklyHypermeth 0.39133 1.0000e+00 insignificant 0.0064475 0.95318963 weaklyHypermeth 1 1.00000 insignificant 0.06703009 0.2164151 insignificant 1.00000 insignificant 0.608916 0.7539894 -0.19814982 17 0.560022 0.646864 -0.08684143 6.4867e-02 5.9479e-20 weaklyHypometh 2.9620e-01 9.9131e-18 weaklyHypometh 7.7777e-01 2.4132e-12 weaklyHypometh 1.0000e+00 4.8263e-10 weaklyHypometh -1.5992e-01 6.2610e-04 weaklyHypometh 1.0435e-02 weaklyHypometh 0.608981 0.3680954 0.17956067 17 0.570817 0.428760 0.14205661 2.0589e-16 9.9952e-01 weaklyHypermeth 3.4316e-14 1.0000e+00 weaklyHypermeth 1.0055e-09 1.0000e+00 weaklyHypermeth 2.5138e-07 1.0000e+00 weaklyHypermeth 1.6873e-01 2.2379e-02 weaklyHypermeth 3.2087e-01 insignificant 0.523088 0.7539894 -0.24238774 17 0.481740 0.646864 -0.16512361 7.0132e-01 4.6273e-16 hypomethylated 1.0000e+00 9.2545e-14 hypomethylated 9.8347e-01 5.2596e-12 hypomethylated 1.0000e+00 2.6298e-09 hypomethylated -2.2695e-01 5.8537e-04 hypomethylated 1.0270e-02 hypomethylated 0.523742 0.3680954 0.12812960 17 0.504680 0.428760 0.07591971 3.0355e-05 9.9711e-01 weaklyHypermeth 9.1986e-04 1.0000e+00 weaklyHypermeth 1.4353e-03 9.9906e-01 weaklyHypermeth 4.0270e-02 1.0000e+00 weaklyHypermeth 0.10170192 1.6130e-01 insignificant 1.0000e+00 insignificant 0.7551111 0.3680954 0.38229434 17 0.661794 0.428760 0.2330333 4.2046e-22 1.0000e+00 hypermethylated 1.0511e-19 1.0000e+00 hypermethylated 3.7284e-11 1.0000e+00 hypermethylated 1.2428e-08 1.0000e+00 hypermethylated 0.3286503 1.0032e-03 weaklyHypermeth 0.02190814 weaklyHypermeth chr21 45682950 45683950 56193 NCRNA00175 ENSG00000183535 0.2902035 685 13 0.232898 481 13 0.279919 343 13 0.3293451 694 13 0.3742284 142 7 0.304637 757 13 0.325465 303 13 0.2943308 283 13 0.2703698 308 13 0.2893906 241 12 0.320567 515 13 0.244056 140 13 0.2544998 315 13 0.059829 43 4 0.306658 258 13 0.2707152 131 10 0.3113131 96 10 0.2549029 576 13 0.350489 320 13 0.390588 577 13 0.286149 229 13 0.2601619 226 10 0.244325 361 13 0.275543 252 13 0.2846201 379 13 0.2977879 610 13 0.222378 272 13 0.2879121 119 13 0.259000 438 13 0.2481266 621 13 0.258878 583 13 0.380229 785 13 0.0676227 401 13 0.0967742 388 13 0.0769231 285 13 0.0384615 174 8 0.0786325 215 13 0.0522660 583 13 0.260111 581 13 0.2007819 674 13 0.2814343 529 13 0.2692209 718 13 0.262245 637 13 0.2676797 0.212419 0.261133 0.2585380 0.2693691 0.2836005 0.3002243 0.2720193 0.2480694 0.2686250 0.297257 0.215418 0.2371090 0.260797 0.2763606 0.2478017 0.2686641 0.2348179 0.3271732 0.273778 0.268603 0.24007292 0.2430133 0.2483053 0.26292071 0.2281003 0.2074043 0.2676492 0.240026 0.228288 0.2414381 0.317885 0.0687591 0.1032841 0.0873494 0.0436747 0.0836011 0.0590490 0.2401819 0.1859129 0.2582141 0.2307304 0.2415754 12 0.271516 0.257284 1.6167e-02 13 0.347015 0.308001 0.0390135 0.57969193 9.6893e-01 insignificant 1.00000 1.0000e+00 insignificant 0.4943069 0.99852632 insignificant 1 1.00000 insignificant 0.01229445 0.5215121 insignificant 1.00000 insignificant 0.271198 0.1045943 0.19461417 13 0.288174 0.069712 0.21846189 3.4001e-49 1.0000e+00 weaklyHypermeth 3.4001e-47 1.0000e+00 weaklyHypermeth 1.8306e-17 1.0000e+00 weaklyHypermeth 3.0511e-15 1.0000e+00 weaklyHypermeth 2.1927e-01 4.5157e-12 hypermethylated 1.1289e-09 hypermethylated 0.271198 0.1998725 0.03431261 13 0.288174 0.252587 0.03558759 2.4710e-03 9.9990e-01 weaklyHypermeth 3.6880e-02 1.0000e+00 weaklyHypermeth 1.5277e-02 9.9787e-01 weaklyHypermeth 2.5462e-01 1.0000e+00 insignificant 3.2962e-02 1.3137e-01 insignificant 9.0597e-01 insignificant 0.257137 0.1045943 0.18093226 13 0.272617 0.069712 0.20290466 3.0968e-33 1.0000e+00 weaklyHypermeth 2.5806e-31 1.0000e+00 weaklyHypermeth 3.4649e-15 1.0000e+00 weaklyHypermeth 6.9298e-13 1.0000e+00 weaklyHypermeth 2.0698e-01 1.2970e-10 hypermethylated 6.4851e-08 hypermethylated 0.257137 0.1998725 0.01976520 13 0.272617 0.252587 0.02003037 2.6650e-02 9.9451e-01 weaklyHypermeth 2.6650e-01 1.0000e+00 insignificant 2.5583e-01 9.6068e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02066726 2.8014e-01 insignificant 1.0000e+00 insignificant 0.1045943 0.1998725 -0.16556402 13 0.069712 0.252587 -0.1828743 1.0000e+00 3.7895e-23 weaklyHypometh 1.0000e+00 5.9106e-21 weaklyHypometh 1.0000e+00 1.4002e-12 weaklyHypometh 1.0000e+00 7.0010e-10 weaklyHypometh -0.1863119 1.2059e-05 weaklyHypometh 0.00141369 weaklyHypometh chr21 46310450 46311450 56198 COL6A1 ENSG00000142156 0.8235227 252 6 0.817744 213 6 0.876686 105 6 0.9151933 209 6 0.8284157 59 6 0.918487 346 6 0.857594 79 6 0.8884758 133 6 0.8138845 106 6 0.9274573 81 6 0.881246 224 6 0.862103 30 3 0.8625541 90 6 1.000000 24 3 0.894771 61 6 0.7724868 24 3 0.7769608 30 3 0.6687573 251 6 0.827539 211 4 0.918850 263 6 0.870036 108 6 0.7829802 78 5 0.850548 141 6 0.829523 179 6 0.8222222 45 3 0.8766456 198 6 0.851852 80 6 0.8712963 80 6 0.879952 172 4 0.9144429 142 6 0.842292 196 6 0.911071 313 6 0.0752801 296 6 0.0151515 56 6 0.0026247 381 3 0.1111111 24 3 0.0707777 150 6 0.3650025 282 6 0.732055 164 6 0.7894324 120 6 0.8208031 139 4 0.6731712 146 6 0.721015 166 6 0.7791416 0.754149 0.795229 0.8801894 0.8455609 0.8857221 0.8111669 0.8866408 0.8002384 0.8752603 0.847207 0.795455 0.8633242 0.850890 0.8560665 0.7438479 0.8088297 0.6133330 0.7665483 0.874633 0.831018 0.67196435 0.8088183 0.8221882 0.70959596 0.8410174 0.8264310 0.8710269 0.847855 0.885065 0.8309746 0.882504 0.0569943 0.0110193 0.0217547 0.1135699 0.0618767 0.2740532 0.6964795 0.7092595 0.7600132 0.6019368 0.6373447 1 0.826944 0.855658 -1.2392e-02 6 0.858112 0.859820 -0.0017079 0.62330276 3.8745e-01 insignificant 1.00000 1.0000e+00 insignificant 0.6215158 0.59690556 insignificant 1 1.00000 insignificant -0.00193526 0.9200331 insignificant 1.00000 insignificant 0.826944 0.1471825 0.72627696 6 0.858112 0.114295 0.74381700 2.6663e-54 1.0000e+00 hypermethylated 3.3329e-52 1.0000e+00 hypermethylated 4.8079e-14 1.0000e+00 hypermethylated 6.0098e-12 1.0000e+00 hypermethylated 7.4998e-01 1.3279e-05 hypermethylated 5.3114e-04 hypermethylated 0.826944 0.6435374 0.12043950 6 0.858112 0.740369 0.11774332 1.9695e-07 9.0652e-01 weaklyHypermeth 8.9521e-06 1.0000e+00 weaklyHypermeth 8.5741e-05 9.8560e-01 weaklyHypermeth 4.0829e-03 1.0000e+00 weaklyHypermeth 1.0934e-01 8.3471e-03 weaklyHypermeth 1.8811e-01 insignificant 0.855658 0.1471825 0.73777368 6 0.859820 0.114295 0.74552487 1.5850e-40 1.0000e+00 hypermethylated 2.2643e-38 1.0000e+00 hypermethylated 1.5190e-12 1.0000e+00 hypermethylated 2.1700e-10 1.0000e+00 hypermethylated 7.5191e-01 2.2146e-05 hypermethylated 8.2023e-04 hypermethylated 0.855658 0.6435374 0.13032664 6 0.859820 0.740369 0.11945120 4.5603e-07 9.6729e-01 weaklyHypermeth 2.4001e-05 1.0000e+00 weaklyHypermeth 6.3060e-04 9.8907e-01 weaklyHypermeth 2.1745e-02 1.0000e+00 weaklyHypermeth 0.11127645 9.2939e-03 weaklyHypermeth 3.0118e-01 insignificant 0.1471825 0.6435374 -0.61557923 6 0.114295 0.740369 -0.6260737 1.0000e+00 4.7285e-23 hypomethylated 1.0000e+00 5.9106e-21 hypomethylated 1.0000e+00 1.5108e-08 hypomethylated 1.0000e+00 1.6787e-06 hypomethylated -0.6406373 1.2723e-05 hypomethylated 0.00141369 hypomethylated chr21 46637350 46638350 56205 PCNT ENSG00000160299 0.8742583 601 15 0.890152 374 14 0.634368 410 14 0.9098590 529 16 0.9224790 190 14 0.901095 514 13 0.909716 237 14 0.8457707 283 14 0.8655302 218 14 0.8906006 249 14 0.887388 441 14 0.881343 135 9 0.9168031 370 14 1.000000 30 3 0.970520 251 14 0.7976190 79 4 0.8344697 124 10 0.9061484 591 14 0.913458 352 14 0.848286 437 14 0.932527 156 14 0.8475878 180 10 0.916007 313 14 0.891467 194 11 0.8950754 251 12 0.8995628 403 14 0.903313 196 14 0.9798604 124 11 0.963458 385 14 0.8553504 420 14 0.931423 431 14 0.947713 558 14 0.7457815 412 14 0.8213178 327 14 0.8439469 748 12 0.8512795 117 9 0.7661475 198 13 0.8757520 522 15 0.851691 434 14 0.9062193 562 16 0.9082953 492 15 0.8976032 578 15 0.789148 548 16 0.9109550 0.895567 0.600879 0.9233023 0.8923410 0.8942623 0.8866286 0.8380142 0.8634115 0.8735579 0.892581 0.870717 0.9020847 NA 0.9617566 0.7871741 0.8270335 0.8473981 0.8982649 0.890599 0.927715 0.88456721 0.8864254 0.8932681 0.87146934 0.8887191 0.8862643 0.9666900 0.946913 0.896533 0.9355338 0.933090 0.6475918 0.7385577 0.8267565 0.7742340 0.6625699 0.8147936 0.8130098 0.8438281 0.8906753 0.8445703 0.7210775 9 0.880281 0.918859 -4.1324e-02 14 0.842957 0.883363 -0.0404065 0.99999511 8.4293e-04 weaklyHypometh 1.00000 1.4049e-01 insignificant 0.9999994 0.00296832 weaklyHypometh 1 0.35703 insignificant -0.03361888 0.1035913 insignificant 1.00000 insignificant 0.880418 0.7254733 0.12815215 14 0.889788 0.839440 0.05034770 6.3866e-08 6.8116e-01 weaklyHypermeth 7.3331e-07 1.0000e+00 weaklyHypermeth 1.6698e-01 4.9145e-01 insignificant 8.3807e-01 1.0000e+00 insignificant 6.2622e-02 3.6010e-02 weaklyHypermeth 2.7914e-01 insignificant 0.880418 0.8458301 0.05397543 12 0.889788 0.868704 0.02108389 5.6746e-03 6.8801e-01 weaklyHypermeth 7.4666e-02 1.0000e+00 weaklyHypermeth 6.4512e-04 4.3663e-01 weaklyHypermeth 1.8974e-02 1.0000e+00 weaklyHypermeth 9.4017e-03 7.4564e-01 insignificant 1.0000e+00 insignificant 0.919114 0.7254733 0.17576299 14 0.932439 0.839440 0.09299898 8.8665e-14 9.9670e-01 weaklyHypermeth 1.9275e-12 1.0000e+00 weaklyHypermeth 1.8568e-02 9.8622e-01 weaklyHypermeth 1.2296e-01 1.0000e+00 insignificant 9.6241e-02 3.5601e-03 weaklyHypermeth 4.1883e-02 weaklyHypermeth 0.919114 0.8458301 0.09468603 12 0.932439 0.868704 0.06373518 1.4921e-10 9.5475e-01 weaklyHypermeth 1.8652e-08 1.0000e+00 weaklyHypermeth 9.5537e-07 9.7152e-01 weaklyHypermeth 1.5923e-04 1.0000e+00 weaklyHypermeth 0.04302062 1.4217e-01 insignificant 1.0000e+00 insignificant 0.7254733 0.8458301 -0.08150130 12 0.839440 0.868704 -0.0292638 4.2629e-01 3.7118e-02 weaklyHypometh 1.0000e+00 2.1332e-01 insignificant 1.4243e-01 6.1119e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0532206 1.2049e-01 insignificant 0.68075085 insignificant chr22 16405396 16406396 56229 CECR2 ENSG00000099954 0.7419312 360 10 0.731718 313 10 0.756903 188 10 0.7347533 209 10 0.6471320 89 10 0.801778 437 10 0.648339 147 10 0.7572262 173 10 0.6566976 122 10 0.7847222 105 10 0.709996 248 10 0.708182 64 7 0.7441266 153 10 0.653388 70 7 0.767441 113 6 0.9125000 31 3 0.9129389 70 3 0.7450447 249 10 0.695549 361 10 0.698343 356 10 0.711248 86 6 0.8891941 42 3 0.773560 197 10 0.650321 68 9 0.8666667 45 3 0.7788951 363 10 0.705890 89 6 0.7155556 58 7 0.741312 312 10 0.8088938 507 10 0.749022 408 10 0.721574 291 6 0.6370998 207 10 0.5974018 159 6 0.6414995 158 10 0.6317460 33 3 0.6075595 123 10 0.6921373 350 10 0.831082 240 10 0.7940721 298 10 0.8131894 284 10 0.6884844 357 10 0.729427 257 10 0.6749750 0.692229 0.616631 0.6146169 0.5600699 0.7429565 0.6962695 0.7584694 0.6433983 0.7642089 0.610277 0.594924 0.7045461 0.634996 0.6434924 0.8185484 0.8228049 0.7369027 0.6668457 0.636454 0.699402 0.82426621 0.7226614 0.7431085 0.76497696 0.7405265 0.6394673 0.6935484 0.695521 0.743901 0.7078307 0.633059 0.5357163 0.5960266 0.6178453 0.5697669 0.6103440 0.6560888 0.6924806 0.7632392 0.7816483 0.6994059 0.6628887 3 0.735614 0.767234 -2.8634e-02 10 0.811243 0.750542 0.0607015 0.99995215 4.7430e-02 weaklyHypometh 1.00000 7.4368e-01 insignificant 0.9966641 0.39892470 insignificant 1 1.00000 insignificant -0.01890889 0.4718456 insignificant 1.00000 insignificant 0.735134 0.6495146 0.08383123 10 0.742604 0.676125 0.06647886 4.5283e-07 9.9909e-01 weaklyHypermeth 4.7170e-06 1.0000e+00 weaklyHypermeth 2.2311e-04 9.9949e-01 weaklyHypermeth 2.7209e-03 1.0000e+00 weaklyHypermeth 1.0586e-01 8.0777e-05 weaklyHypermeth 1.8785e-03 weaklyHypermeth 0.735546 0.7562674 -0.02260578 10 0.797760 0.821127 -0.02336674 9.9541e-01 1.9716e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9602e-01 6.9928e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -3.0815e-02 3.5993e-01 insignificant 1.0000e+00 insignificant 0.767262 0.6495146 0.11360087 10 0.750738 0.676125 0.07461315 2.9333e-09 9.9997e-01 weaklyHypermeth 4.1315e-08 1.0000e+00 weaklyHypermeth 8.3184e-06 9.9999e-01 weaklyHypermeth 1.8084e-04 1.0000e+00 weaklyHypermeth 1.2477e-01 9.0060e-05 weaklyHypermeth 2.3092e-03 weaklyHypermeth 0.767140 0.7562674 0.00802571 10 0.732723 0.821127 -0.08840408 8.8550e-01 8.5332e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.2052e-01 8.6381e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01190659 7.3040e-01 insignificant 1.0000e+00 insignificant 0.6495146 0.7555866 -0.10806667 10 0.676125 0.772344 -0.0962183 9.9957e-01 1.9071e-05 weaklyHypometh 1.0000e+00 2.6487e-04 weaklyHypometh 9.9999e-01 2.1640e-04 weaklyHypometh 1.0000e+00 5.0326e-03 weaklyHypometh -0.1366770 3.9710e-03 weaklyHypometh 0.06204693 weaklyHypometh chr22 16511596 16512596 56234 BCL2L13 ENSG00000099968 0.8091347 474 11 0.759230 573 11 0.697150 288 11 0.7473499 395 11 0.7036713 304 11 0.771024 775 11 0.747898 345 11 0.7905198 407 12 0.6154801 303 11 0.7395743 214 10 0.618698 547 11 0.830596 108 7 0.7613985 288 11 0.837778 180 11 0.694896 341 11 0.6736061 122 9 0.5585197 201 5 0.7704471 499 11 0.780490 565 12 0.881148 613 12 0.849901 84 8 0.9455977 84 8 0.727421 334 12 0.817004 217 12 0.8662014 109 8 0.7824564 518 11 0.844772 234 10 0.8097510 141 7 0.792006 590 10 0.9280529 662 11 0.814186 660 11 0.786795 569 12 0.7030792 382 11 0.8183000 328 9 0.8885018 512 10 0.9928571 26 1 0.6416226 263 11 0.8281452 586 11 0.877127 520 11 0.8942005 430 10 0.7897254 440 11 0.7229607 539 9 0.705532 395 11 0.9327128 0.896985 0.854495 0.9059316 0.8677968 0.9145811 0.8906063 0.8747331 0.8867574 0.8573520 0.837813 0.825779 0.9029942 0.910905 0.9112822 0.8433430 0.7421322 0.9004066 0.9090595 0.938096 0.920371 0.91669751 0.9252104 0.9260286 0.88551562 0.9164015 0.8337585 0.9106707 0.861127 0.936599 0.9369112 0.892071 0.8442202 0.8368013 0.8811425 0.9803300 0.8764310 0.8980690 0.9424434 0.9241628 0.9018544 0.9255019 0.9468452 5 0.894946 0.918848 -1.6812e-02 11 0.664594 0.751600 -0.0870058 0.99305504 8.1379e-03 weaklyHypometh 1.00000 3.3136e-01 insignificant 0.9878741 0.00623316 weaklyHypometh 1 0.39355 insignificant -0.09091465 0.0012221 weaklyHypometh 0.75877 insignificant 0.894723 0.9265618 -0.01569819 11 0.646191 0.698098 -0.05190675 7.1523e-01 2.9923e-03 weaklyHypometh 1.0000e+00 1.1509e-01 insignificant 9.8574e-01 1.6055e-02 weaklyHypometh 1.0000e+00 5.6636e-01 insignificant -7.2654e-02 2.2966e-01 insignificant 1.0000e+00 insignificant 0.896423 0.9350258 -0.02827933 10 0.717493 0.730040 -0.01254764 9.9618e-01 4.2038e-04 weaklyHypometh 1.0000e+00 2.3354e-02 weaklyHypometh 9.9225e-01 1.5391e-03 weaklyHypometh 1.0000e+00 7.6957e-02 weaklyHypometh -5.8479e-02 2.1953e-01 insignificant 1.0000e+00 insignificant 0.918848 0.9265267 0.00043506 11 0.751600 0.680339 0.07126139 4.9103e-01 1.7017e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.2070e-01 5.7406e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.8261e-02 7.4879e-01 insignificant 1.0000e+00 insignificant 0.919028 0.9350258 -0.01345526 10 0.785147 0.730040 0.05510654 8.7912e-01 7.4806e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 8.8373e-01 4.8998e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03243601 4.7515e-01 insignificant 1.0000e+00 insignificant 0.9274117 0.9350258 -0.01136409 10 0.771050 0.730040 0.0410103 4.1424e-01 2.1509e-01 insignificant 1.0000e+00 9.1227e-01 insignificant 5.8719e-01 5.1839e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0141752 8.3083e-01 insignificant 1.00000000 insignificant chr22 16655296 16656296 56242 BID ENSG00000015475 0.9229310 142 6 0.680556 22 1 0.824074 37 3 0.9253247 73 6 0.9000000 11 0 0.938571 59 4 0.666667 3 0 0.7777778 17 1 1.0000000 8 1 1.0000000 12 1 0.818085 120 5 0.833333 9 0 1.0000000 18 2 NA 0 0 0.837500 13 2 0.5333333 8 0 0.8000000 15 1 0.8603875 88 6 0.902778 22 2 0.866626 79 5 0.800000 10 2 0.6000000 14 2 1.000000 39 5 0.666667 11 2 0.7714286 21 2 1.0000000 38 4 0.755556 20 2 0.5666667 10 0 0.905556 23 3 0.8974026 39 4 0.921429 45 3 0.772472 140 5 0.7638889 26 1 0.9166667 13 2 0.9444444 18 3 0.8888889 18 2 0.6833333 14 0 0.9652778 48 4 0.911681 66 6 0.9326652 134 6 0.9012681 75 6 0.9496732 82 6 0.925794 69 5 0.9733333 0.916667 0.777778 0.9696970 0.6666667 0.9285714 NA 1.0000000 1.0000000 1.0000000 0.876667 1.000000 1.0000000 NA 0.8500000 0.3333333 0.9333333 0.9019608 1.0000000 0.959559 0.800000 1.00000000 1.0000000 1.0000000 0.90476190 1.0000000 0.8518519 0.7777778 1.000000 0.904762 0.9166667 0.938964 0.9444444 0.9444444 NA 0.8518519 0.8333333 1.0000000 0.9629630 1.0000000 0.8985507 0.9019608 0.9365079 0 0.894180 0.907317 -6.2040e-03 4 0.876355 0.895514 -0.0191589 0.85953777 5.0164e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.8478169 0.69101870 lowCoverage 1 1.00000 lowCoverage 0.04196916 0.4129556 lowCoverage 1.00000 lowCoverage 0.894180 0.8978102 0.00078708 1 0.876355 0.901550 -0.02519523 8.2981e-01 5.6894e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.4354e-01 2.9058e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -1.3683e-02 8.0389e-01 lowCoverage 1.0000e+00 lowCoverage 0.894180 0.9201878 -0.02612676 5 0.876355 0.921065 -0.04471021 8.8782e-01 9.3035e-02 insignificant 1.0000e+00 9.6912e-01 insignificant 7.3006e-01 4.8650e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -7.7482e-02 1.4498e-02 lowCoverage 2.5434e-01 lowCoverage 0.907317 0.8978102 0.00709952 1 0.895514 0.901550 -0.00603634 7.2007e-01 5.7704e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.2604e-01 5.8572e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -5.5652e-02 3.8569e-01 lowCoverage 1.0000e+00 lowCoverage 0.907317 0.9201878 -0.01344529 4 0.895514 0.921065 -0.02555131 8.1528e-01 5.2835e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 6.1456e-01 6.3176e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.11945150 1.6199e-02 lowCoverage 3.4894e-01 lowCoverage 0.8978102 0.9201878 -0.02252202 1 0.901550 0.921065 -0.0195150 1.4150e-01 6.5511e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 2.6443e-01 4.2019e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0637996 2.2479e-01 lowCoverage 0.98159572 lowCoverage chr22 16661296 16662296 56243 BID ENSG00000015475 0.8060236 285 9 0.646244 191 8 0.827331 166 10 0.8225290 163 8 0.8617521 148 10 0.728442 359 10 0.788685 213 10 0.8047665 155 10 0.7742058 187 10 0.8948834 159 9 0.726622 341 10 0.778135 134 8 0.7739731 181 10 0.645503 25 3 0.822067 180 10 0.8351326 133 8 0.7972944 155 8 0.8254552 199 9 0.743501 217 10 0.850381 364 10 0.794765 126 5 0.8665962 166 9 0.727326 217 10 0.802955 156 8 0.8508516 218 5 0.7661745 274 10 0.820107 252 8 0.8678571 101 7 0.725034 120 8 0.7251763 243 10 0.788205 274 10 0.821629 406 10 0.7844368 210 9 0.7371116 176 10 0.7152197 174 7 0.7736508 55 5 0.8135491 135 9 0.7796116 190 10 0.887323 247 9 0.8874501 315 9 0.8234537 195 9 0.8811426 235 9 0.874103 269 9 0.7976124 0.774811 0.788465 0.8344043 0.8403760 0.7959825 0.7652755 0.8027656 0.7738081 0.8948001 0.802095 0.790076 0.8285347 0.765346 0.8032239 0.7818603 0.7740476 0.8282480 0.8374338 0.837883 0.782745 0.82135873 0.7636505 0.8487561 0.83168195 0.8232188 0.8042869 0.8457598 0.737459 0.772870 0.7989005 0.787795 0.7577025 0.7026831 0.7480853 0.8375544 0.7855912 0.7844165 0.8738414 0.8826400 0.8231544 0.8949721 0.8574376 6 0.838180 0.782609 2.2967e-03 10 0.753191 0.760194 -0.0070031 0.74026435 6.2141e-01 insignificant 1.00000 1.0000e+00 insignificant 0.8400798 0.71698336 insignificant 1 1.00000 insignificant -0.00874352 0.6789711 insignificant 1.00000 insignificant 0.838996 0.7702128 0.04561813 10 0.782992 0.791826 -0.00883363 9.8917e-04 5.9984e-01 weaklyHypermeth 6.3004e-03 1.0000e+00 weaklyHypermeth 1.2174e-01 5.2775e-01 insignificant 6.4413e-01 1.0000e+00 insignificant 2.0383e-02 3.3297e-01 insignificant 1.0000e+00 insignificant 0.838612 0.8834259 -0.05843504 9 0.776499 0.878694 -0.10219503 9.9988e-01 1.7503e-04 weaklyHypometh 1.0000e+00 1.0296e-02 weaklyHypometh 1.0000e+00 9.6290e-04 weaklyHypometh 1.0000e+00 6.4193e-02 weaklyHypometh -8.3048e-02 4.0318e-04 weaklyHypometh 2.7943e-02 weaklyHypometh 0.783274 0.7702128 0.04376950 10 0.807503 0.791826 0.01567647 7.3641e-03 9.3932e-01 weaklyHypermeth 4.2567e-02 1.0000e+00 weaklyHypermeth 1.2776e-01 8.4340e-01 insignificant 6.4202e-01 1.0000e+00 insignificant 2.9127e-02 1.8482e-01 insignificant 9.2412e-01 insignificant 0.782882 0.8834259 -0.05993943 9 0.784775 0.878694 -0.09391870 9.9951e-01 5.4377e-04 weaklyHypometh 1.0000e+00 6.0419e-02 weaklyHypometh 9.9999e-01 7.5156e-03 weaklyHypometh 1.0000e+00 5.1991e-01 insignificant -0.07430460 1.8091e-03 weaklyHypometh 1.3916e-01 insignificant 0.7699681 0.8833333 -0.10695973 9 0.771009 0.866563 -0.0955547 9.9706e-01 4.9171e-06 weaklyHypometh 1.0000e+00 8.3341e-05 weaklyHypometh 9.9805e-01 1.5287e-04 weaklyHypometh 1.0000e+00 4.0228e-03 weaklyHypometh -0.1034311 3.8661e-04 weaklyHypometh 0.01247128 weaklyHypometh chr22 16773196 16774196 56248 ENSG00000093100 0.4764626 346 7 0.536324 275 8 0.420829 139 7 0.6504887 333 8 0.4882688 64 4 0.643877 405 8 0.524699 136 8 0.5205983 161 7 0.4355379 104 8 0.4946658 84 7 0.632393 293 8 0.648148 31 3 0.4687928 138 7 0.483974 43 3 0.464716 137 6 0.5714286 24 3 0.5666667 17 0 0.5255624 374 7 0.490158 275 7 0.447827 365 7 0.561195 96 6 0.3641900 124 5 0.572118 209 8 0.452937 130 7 0.5302253 78 7 0.3529191 318 8 0.430185 135 8 0.5674603 61 3 0.532370 289 7 0.5887173 365 8 0.421690 329 8 0.657560 397 7 0.0029240 283 9 0.0000000 187 8 0.0000000 175 5 0.0000000 82 6 0.0165785 274 8 0.0116250 473 8 0.156027 515 7 0.1766476 457 8 0.2262499 358 8 0.2622571 415 7 0.226852 398 8 0.5677719 0.590433 0.406635 0.5928098 0.3917114 0.6434858 0.5576388 0.5296435 0.3899965 0.5190899 0.639074 0.515568 0.3941867 0.517946 0.4122956 0.6090217 0.4855337 0.4833389 0.4366346 0.383577 0.539896 0.31257714 0.5192981 0.4206118 0.47030790 0.3423419 0.4986272 0.4942439 0.435180 0.510664 0.4519737 0.732482 0.0047715 0.0000000 0.0030186 0.0000000 0.0116170 0.0133065 0.1324476 0.1772904 0.1379965 0.2227628 0.2579940 2 0.516827 0.451600 3.9305e-02 7 0.554135 0.504380 0.0497552 0.04487648 9.7341e-01 weaklyHypermeth 1.00000 1.0000e+00 insignificant 0.3431951 0.78779314 insignificant 1 1.00000 insignificant 0.02194033 0.5027435 insignificant 1.00000 insignificant 0.516827 0.0081466 0.50358869 7 0.554135 0.009163 0.54497202 5.9278e-61 1.0000e+00 hypermethylated 1.9759e-58 1.0000e+00 hypermethylated 2.6313e-19 1.0000e+00 hypermethylated 8.7711e-17 1.0000e+00 hypermethylated 5.1938e-01 1.1973e-18 hypermethylated 1.1973e-15 hypermethylated 0.516827 0.2165189 0.32989216 7 0.554135 0.217204 0.33693053 5.3585e-32 1.0000e+00 hypermethylated 5.3585e-29 1.0000e+00 hypermethylated 8.6985e-15 1.0000e+00 hypermethylated 8.6985e-12 1.0000e+00 hypermethylated 3.1496e-01 9.9563e-08 hypermethylated 4.1818e-05 hypermethylated 0.451600 0.0081466 0.44255773 8 0.504380 0.009163 0.49521684 5.1839e-31 1.0000e+00 hypermethylated 3.7028e-29 1.0000e+00 hypermethylated 1.5280e-16 1.0000e+00 hypermethylated 5.0934e-14 1.0000e+00 hypermethylated 4.9744e-01 1.3281e-09 hypermethylated 3.1665e-07 hypermethylated 0.451600 0.2165189 0.28192383 8 0.504380 0.217204 0.28717535 1.6268e-14 1.0000e+00 hypermethylated 7.9366e-12 1.0000e+00 hypermethylated 7.0378e-12 1.0000e+00 hypermethylated 7.0378e-09 1.0000e+00 hypermethylated 0.29302379 3.3796e-07 hypermethylated 1.6898e-04 hypermethylated 0.0081466 0.2165189 -0.15615972 8 0.009163 0.217204 -0.2080415 9.9992e-01 2.4062e-19 weaklyHypometh 1.0000e+00 2.1875e-17 weaklyHypometh 9.9998e-01 2.4013e-09 weaklyHypometh 1.0000e+00 4.8026e-07 weaklyHypometh -0.2044189 3.5493e-04 hypomethylated 0.01183110 hypomethylated chr22 16858796 16859796 56264 MIR648 ENSG00000207780 0.8415953 199 9 0.827995 183 9 0.729102 109 9 0.8328375 193 9 0.8699118 110 9 0.825619 191 9 0.825694 125 6 0.7761688 176 9 0.8648129 119 8 0.8566320 113 6 0.818917 297 9 0.886932 82 7 0.7425178 98 6 0.848901 59 4 0.850676 112 8 0.7886311 66 6 0.6906681 1377 6 0.7906247 94 8 0.742857 64 6 0.852999 212 9 0.726667 52 7 0.8865147 41 2 0.824590 133 9 0.785774 113 8 0.8726230 78 6 0.8444984 176 9 0.819190 88 8 0.8750000 48 4 0.816735 94 6 0.8072151 215 9 0.835382 218 9 0.769825 203 9 0.7991937 206 9 0.7315990 171 9 0.7215775 180 6 0.6938776 28 2 0.7624054 157 8 0.7942665 293 9 0.875441 234 9 0.8860320 219 9 0.7749996 184 9 0.8915242 93 7 0.847595 188 7 0.7761045 0.789956 0.703572 0.8070188 0.8301141 0.7877433 0.8335509 0.7242327 0.7942168 0.8436393 0.782671 0.881090 0.7672069 0.767616 0.7915861 0.6976748 0.6778152 0.7782077 0.7522605 0.806354 0.731068 0.82515974 0.7531898 0.6840655 0.81824143 0.8158405 0.7379930 0.8422330 0.812861 0.789719 0.7832850 0.721809 0.7419589 0.6421177 0.7261747 0.6465605 0.7753361 0.7149291 0.8461338 0.8537056 0.7993561 0.8342264 0.7891424 5 0.766524 0.834478 -2.9991e-02 9 0.814575 0.840560 -0.0259849 0.98986463 4.7311e-02 weaklyHypometh 1.00000 7.4368e-01 insignificant 0.8220150 0.66963353 insignificant 1 1.00000 insignificant -0.00879668 0.6271555 insignificant 1.00000 insignificant 0.766466 0.7940039 0.01733155 9 0.793972 0.784666 0.00930582 1.0659e-02 3.3258e-01 weaklyHypermeth 5.8565e-02 1.0000e+00 weaklyHypermeth 3.2279e-03 9.6027e-01 weaklyHypermeth 2.8821e-02 1.0000e+00 weaklyHypermeth 6.2718e-02 1.2785e-02 weaklyHypermeth 1.1604e-01 insignificant 0.766466 0.8920393 -0.07803751 9 0.793972 0.867798 -0.07382616 1.0000e+00 9.3592e-07 weaklyHypometh 1.0000e+00 2.3398e-04 weaklyHypometh 9.9736e-01 5.6262e-03 weaklyHypometh 1.0000e+00 1.8754e-01 insignificant -4.1914e-02 1.3259e-01 insignificant 9.0817e-01 insignificant 0.834592 0.7932367 0.04624294 9 0.840560 0.706199 0.13436015 1.5584e-03 9.4011e-01 weaklyHypermeth 1.0601e-02 1.0000e+00 weaklyHypermeth 4.0750e-03 9.8137e-01 weaklyHypermeth 3.8084e-02 1.0000e+00 weaklyHypermeth 7.1515e-02 7.1766e-03 weaklyHypermeth 7.7168e-02 weaklyHypermeth 0.834592 0.8910675 -0.04163313 9 0.840560 0.781018 0.05954137 9.9990e-01 8.0316e-03 weaklyHypometh 1.0000e+00 3.4920e-01 insignificant 9.9755e-01 3.9444e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.03311709 2.2920e-01 insignificant 1.0000e+00 insignificant 0.7932367 0.8910675 -0.08464464 9 0.706199 0.781018 -0.0748188 9.9565e-01 2.1144e-06 weaklyHypometh 1.0000e+00 3.9155e-05 weaklyHypometh 9.9940e-01 4.7739e-03 weaklyHypometh 1.0000e+00 5.5726e-02 weaklyHypometh -0.1046317 5.0074e-03 weaklyHypometh 0.07052692 weaklyHypometh chr22 16869096 16870096 56265 MIR648 ENSG00000207780 0.5797769 262 9 0.418542 190 9 0.575473 115 9 0.6172911 244 9 0.5952764 91 9 0.608567 336 9 0.532407 157 9 0.5383579 149 9 0.4794974 115 9 0.6828906 150 9 0.585231 329 9 0.584604 62 5 0.6454444 225 9 0.651474 103 9 0.588779 178 9 0.7045855 58 2 0.5984127 43 5 0.6999848 257 9 0.642416 169 9 0.637793 289 9 0.669696 87 5 0.6772080 79 9 0.627202 192 9 0.586243 88 9 0.6647059 72 5 0.5914815 250 9 0.719577 102 9 0.5897749 96 8 0.665040 174 9 0.6225764 223 9 0.643590 238 9 0.608420 455 9 0.5332101 192 9 0.5765369 169 9 0.6213424 156 8 0.6083333 59 5 0.5520282 120 9 0.6069711 214 9 0.669489 186 9 0.6323570 280 9 0.6427579 258 9 0.6803901 207 9 0.577513 250 9 0.6036559 0.514579 0.597314 0.6405961 0.6460760 0.6274713 0.5899240 0.5681796 0.5661750 0.6545616 0.618425 0.605623 0.6892880 0.658551 0.6131755 0.6701108 0.5942498 0.6683596 0.6607517 0.668036 0.678791 0.63080148 0.6439524 0.6843067 0.68261191 0.6445568 0.7388440 0.6541512 0.678723 0.645576 0.6443940 0.636817 0.5508250 0.5994530 0.5952423 0.6339623 0.6226041 0.5822219 0.6946937 0.6654384 0.6801462 0.6952140 0.6288360 5 0.672061 0.700875 -2.6974e-02 9 0.605610 0.629365 -0.0237559 0.98602761 1.7455e-02 weaklyHypometh 1.00000 4.7176e-01 insignificant 0.9907368 0.00468415 weaklyHypometh 1 0.39035 insignificant -0.04045269 0.0494855 weaklyHypometh 1.00000 insignificant 0.672061 0.6351648 0.03176272 9 0.605610 0.588427 0.01718243 3.5980e-02 3.3348e-01 weaklyHypermeth 1.8172e-01 1.0000e+00 insignificant 2.8530e-01 7.4938e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.5270e-02 4.8189e-01 insignificant 1.0000e+00 insignificant 0.672061 0.6596105 -0.03771368 9 0.605610 0.632651 -0.02704137 9.9443e-01 5.5886e-02 insignificant 1.0000e+00 7.8712e-01 insignificant 9.8521e-01 5.7346e-02 insignificant 1.0000e+00 7.8556e-01 insignificant -4.2161e-02 1.0486e-01 insignificant 8.0354e-01 insignificant 0.700875 0.6351648 0.05813086 9 0.629365 0.588427 0.04093829 5.6714e-05 9.4260e-01 weaklyHypermeth 4.9317e-04 1.0000e+00 weaklyHypermeth 6.2130e-03 9.8657e-01 weaklyHypermeth 5.1347e-02 1.0000e+00 weaklyHypermeth 5.5723e-02 1.1668e-02 weaklyHypermeth 1.1668e-01 insignificant 0.700875 0.6596105 -0.00940839 9 0.629365 0.632651 -0.00328551 8.1079e-01 4.7510e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.9733e-01 5.1323e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00170858 9.3903e-01 insignificant 1.0000e+00 insignificant 0.6351648 0.6596105 -0.06888469 9 0.588427 0.632651 -0.0442238 9.0621e-01 8.1000e-04 weaklyHypometh 1.0000e+00 8.1000e-03 weaklyHypometh 9.6292e-01 1.1104e-02 weaklyHypometh 1.0000e+00 1.0378e-01 insignificant -0.0574312 3.6825e-02 weaklyHypometh 0.31207887 insignificant chr22 17212496 17213496 56277 ENSG00000216340 0.8897140 1006 21 0.725749 812 21 0.872193 590 21 0.8375511 1032 21 0.8019420 584 21 0.775016 1482 21 0.780533 709 21 0.8658762 447 20 0.7659330 363 20 0.8484251 618 19 0.824513 1295 21 0.810303 641 18 0.9063109 437 18 0.832895 301 13 0.821337 521 19 0.8825280 437 17 0.7194062 1391 9 0.8880304 1007 21 0.729378 881 16 0.809337 1367 21 0.765010 367 21 0.7838054 229 16 0.887079 949 21 0.763181 368 20 0.8799725 222 13 0.7723626 945 21 0.807911 784 20 0.7574460 393 19 0.870441 1159 17 0.8319858 1077 21 0.811569 1294 20 0.780943 1625 21 0.7581813 874 18 0.7409627 936 21 0.7857734 806 21 0.8655526 116 6 0.7708165 626 20 0.7836783 1390 21 0.862691 1408 21 0.9088096 1537 21 0.8777186 987 21 0.8391743 1326 21 0.887571 1238 21 0.8713222 0.820322 0.890861 0.8675085 0.8591209 0.8459095 0.8436237 0.8651614 0.8536842 0.9058847 0.866312 0.839383 0.9170315 0.878803 0.8915038 0.8970079 0.8399398 0.8997024 0.8206865 0.850158 0.768407 0.89854504 0.8821395 0.8219090 0.91968967 0.8673971 0.8242056 0.8214699 0.866920 0.868204 0.8512680 0.845131 0.7870376 0.8030264 0.9000637 0.8805601 0.8411589 0.8123908 0.8913560 0.9029698 0.8790510 0.9213894 0.9223290 12 0.863200 0.856779 9.4242e-03 21 0.811245 0.782057 0.0291885 0.15344687 2.5543e-01 insignificant 1.00000 1.0000e+00 insignificant 0.4708805 0.18057271 insignificant 1 1.00000 insignificant 0.01003963 0.5958501 insignificant 1.00000 insignificant 0.863200 0.8323505 0.03588970 21 0.811245 0.713339 0.09790646 1.0800e-04 9.0811e-01 weaklyHypermeth 8.1203e-04 1.0000e+00 weaklyHypermeth 1.1534e-02 7.1665e-01 weaklyHypermeth 8.6373e-02 1.0000e+00 weaklyHypermeth 3.5188e-02 1.3449e-01 insignificant 7.2696e-01 insignificant 0.863228 0.9057882 -0.04439112 21 0.813695 0.867615 -0.05392048 9.9365e-01 7.8055e-05 weaklyHypometh 1.0000e+00 6.5046e-03 weaklyHypometh 9.9881e-01 5.7459e-04 weaklyHypometh 1.0000e+00 4.4199e-02 weaklyHypometh -5.5844e-02 5.7104e-03 weaklyHypometh 1.5433e-01 insignificant 0.856779 0.8323505 0.02772060 21 0.782057 0.713339 0.06871796 3.9882e-03 9.4904e-01 weaklyHypermeth 2.4171e-02 1.0000e+00 weaklyHypermeth 1.3430e-01 9.7620e-01 insignificant 6.6158e-01 1.0000e+00 insignificant 2.5148e-02 2.8466e-01 insignificant 1.0000e+00 insignificant 0.856854 0.9057882 -0.05387417 21 0.793339 0.867615 -0.07427652 9.9626e-01 1.4435e-05 weaklyHypometh 1.0000e+00 2.8871e-03 weaklyHypometh 9.8428e-01 1.6087e-03 weaklyHypometh 1.0000e+00 2.1801e-01 insignificant -0.06588397 2.8131e-03 weaklyHypometh 1.7164e-01 insignificant 0.8323151 0.9057882 -0.07803043 21 0.701872 0.867615 -0.1657432 9.9997e-01 2.2678e-08 weaklyHypometh 1.0000e+00 5.9679e-07 weaklyHypometh 9.9869e-01 4.0443e-04 weaklyHypometh 1.0000e+00 7.9299e-03 weaklyHypometh -0.0910321 2.3775e-03 weaklyHypometh 0.04170978 weaklyHypometh chr22 18029896 18030896 56294 ENSG00000219886 0.7687993 276 7 0.739539 191 7 0.652374 175 7 0.8057494 119 6 0.7000000 30 4 0.749311 338 7 0.716536 82 4 0.7305878 85 4 0.5860294 73 4 0.7698322 79 4 0.726450 140 4 0.773529 66 4 0.7589371 111 4 NA 0 0 0.685568 118 4 0.7708333 29 3 0.8031250 58 4 0.7630596 168 7 0.733595 147 4 0.762063 357 7 0.589922 85 4 0.8259109 80 4 0.730388 167 6 0.691525 94 4 0.8269231 52 4 0.7869691 306 7 0.626208 102 4 0.6301440 66 4 0.718651 89 4 0.7561171 300 7 0.774545 300 7 0.754101 387 6 0.6399647 181 7 0.6000000 82 4 0.7517030 154 7 0.4416403 99 4 0.6754141 120 4 0.7286709 275 7 0.759742 290 7 0.7859974 278 6 0.7850663 205 7 0.7192457 241 6 0.774663 241 6 0.7573145 0.730432 0.619695 0.7707637 0.7085551 0.7198970 0.7000417 0.7219579 0.5850481 0.7651750 0.720555 0.784970 0.7607775 NA 0.6845819 0.7905577 0.8010932 0.7824729 0.7333560 0.677895 0.573280 0.82210095 0.6847005 0.6773139 0.82363264 0.7477257 0.6066659 0.6350461 0.718456 0.691369 0.7293627 0.734122 0.6474585 0.5973927 0.7960217 0.4450772 0.6640090 0.7062163 0.7531239 0.7524548 0.7760456 0.7715546 0.7503119 4 0.729750 0.724359 5.6704e-03 6 0.748286 0.752734 -0.0044479 0.67830726 5.9311e-01 insignificant 1.00000 1.0000e+00 insignificant 0.7102524 0.48719234 insignificant 1 1.00000 insignificant 0.01067687 0.6812409 lowCoverage 1.00000 lowCoverage 0.729750 0.6608123 0.06272302 6 0.748286 0.673985 0.07430167 3.0064e-04 9.8891e-01 weaklyHypermeth 2.0878e-03 1.0000e+00 weaklyHypermeth 4.2840e-04 9.9623e-01 weaklyHypermeth 4.7077e-03 1.0000e+00 weaklyHypermeth 9.7062e-02 8.7967e-02 lowCoverage 5.4709e-01 lowCoverage 0.729750 0.7505976 -0.02714591 6 0.748286 0.765979 -0.01769315 5.3743e-01 8.3900e-02 insignificant 1.0000e+00 9.3223e-01 insignificant 6.4202e-01 1.5480e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -2.8316e-02 1.2628e-01 lowCoverage 8.8932e-01 lowCoverage 0.724359 0.6608123 0.05891551 7 0.752734 0.673985 0.07874954 8.6755e-04 9.8849e-01 weaklyHypermeth 6.1815e-03 1.0000e+00 weaklyHypermeth 2.6296e-03 9.9588e-01 weaklyHypermeth 2.5780e-02 1.0000e+00 weaklyHypermeth 8.6385e-02 1.3052e-01 insignificant 7.3060e-01 insignificant 0.724359 0.7505976 -0.03119359 6 0.752734 0.765979 -0.01324528 7.7049e-01 6.0077e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 6.5014e-01 1.3305e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03899240 1.4983e-01 insignificant 1.0000e+00 insignificant 0.6608123 0.7505976 -0.08726249 6 0.673985 0.765979 -0.0919948 8.5044e-01 6.6082e-04 weaklyHypometh 1.0000e+00 6.8964e-03 weaklyHypometh 8.9151e-01 8.8971e-04 weaklyHypometh 1.0000e+00 1.4260e-02 weaklyHypometh -0.1253773 3.9772e-02 weaklyHypometh 0.33041150 insignificant chr22 18055996 18056996 56295 ENSG00000219886 0.9486482 507 11 0.867924 589 6 0.813995 332 9 0.9461950 361 12 0.8201102 297 7 0.872129 596 9 0.830402 359 9 0.8873627 330 9 0.8318417 276 7 0.8885957 252 9 0.879724 526 9 0.714815 101 6 0.8729067 303 9 0.812515 250 9 0.861395 345 7 0.4774929 89 4 0.0000000 9 1 0.8615340 536 9 0.913958 646 9 0.816627 569 11 0.808616 137 9 0.7532143 112 7 0.816690 215 10 0.802424 180 7 0.9533394 103 7 0.8498230 587 11 0.832629 217 6 0.6449017 107 6 0.839773 641 9 0.9119301 565 11 0.917898 629 9 0.902758 621 11 0.3789585 291 7 0.4973077 405 7 0.2455874 457 6 0.7823782 120 5 0.3707084 433 9 0.5811435 738 11 0.927393 473 9 0.8909178 402 9 0.8985673 359 9 0.8912679 490 9 0.838483 315 9 0.9043882 0.842273 0.856186 0.9352795 0.8502511 0.9053417 0.8234847 0.8767939 0.8233714 0.8949761 0.888430 0.814137 0.8810518 0.844030 0.8471205 0.6299669 NA 0.8464718 0.8868803 0.890592 0.816164 0.86402773 0.8077658 0.8249388 0.95560793 0.9189127 0.8357781 0.7744138 0.850777 0.920217 0.9374752 0.912686 0.5431538 0.5109851 0.3455226 0.7792623 0.5107840 0.4743042 0.9186028 0.9140674 0.8748427 0.8862140 0.8801459 6 0.875292 0.893291 -1.6664e-02 9 0.882076 0.815345 0.0667305 0.81623797 4.0338e-01 insignificant 1.00000 1.0000e+00 insignificant 0.6919414 0.44529434 insignificant 1 1.00000 insignificant -0.04025795 0.4557176 insignificant 1.00000 insignificant 0.875292 0.4869067 0.36234822 11 0.882076 0.490917 0.39115906 3.9714e-46 1.0000e+00 hypermethylated 3.6103e-44 1.0000e+00 hypermethylated 9.3494e-13 1.0000e+00 hypermethylated 8.4994e-11 1.0000e+00 hypermethylated 3.1989e-01 6.2672e-03 weaklyHypermeth 6.6674e-02 weaklyHypermeth 0.875241 0.8950466 -0.02030443 9 0.872249 0.890680 -0.01843134 8.7758e-01 1.8856e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7652e-01 1.6238e-02 weaklyHypometh 1.0000e+00 3.8125e-01 insignificant -9.3417e-02 7.2844e-02 insignificant 6.6222e-01 insignificant 0.893291 0.4869067 0.38540670 9 0.815345 0.490917 0.32442853 1.1645e-30 1.0000e+00 hypermethylated 7.2779e-29 1.0000e+00 hypermethylated 3.2652e-09 1.0000e+00 hypermethylated 1.5781e-07 1.0000e+00 hypermethylated 3.6015e-01 4.3333e-03 weaklyHypermeth 5.0387e-02 weaklyHypermeth 0.893508 0.8950466 -0.00334462 7 0.883291 0.890680 -0.00738941 8.6661e-01 4.8380e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6501e-01 2.8115e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.05315942 7.7394e-02 insignificant 8.5048e-01 insignificant 0.4871060 0.8950466 -0.39947782 9 0.531827 0.890680 -0.3588537 1.0000e+00 2.5698e-18 hypomethylated 1.0000e+00 1.9768e-16 hypomethylated 1.0000e+00 7.1416e-08 hypomethylated 1.0000e+00 5.4935e-06 hypomethylated -0.4133119 2.7034e-03 weaklyHypometh 0.04661044 weaklyHypometh chr22 18088496 18089496 56297 SEPT5 ENSG00000184702 0.3948602 350 12 0.245133 449 13 0.417644 483 11 0.2551782 425 11 0.1902591 250 11 0.354884 517 13 0.268518 513 11 0.2301716 281 11 0.1755868 564 11 0.1974552 446 11 0.209499 431 13 0.736349 214 8 0.1036138 425 11 0.071429 67 3 0.267581 433 10 0.3214151 254 11 0.3240563 484 10 0.2999560 462 12 0.196965 290 10 0.175245 499 11 0.698245 160 10 0.1705485 284 7 0.248824 353 10 0.353390 213 10 0.7025803 203 9 0.5329353 400 11 0.728144 239 10 0.5140194 194 8 0.575964 331 13 0.0542316 485 11 0.128290 561 11 0.634045 389 11 0.7229176 315 13 0.7109006 311 13 0.7200000 120 5 0.7560244 100 6 0.8547381 228 11 0.6968938 318 11 0.335131 475 11 0.4308276 486 14 0.3218949 262 7 0.2571398 485 10 0.336826 499 13 0.2745441 0.159270 0.445496 0.1184500 0.1213129 0.1977205 0.1920732 0.1675192 0.1492181 0.2065389 0.225917 0.667957 0.0864873 0.157456 0.0894534 0.2698171 0.2044917 0.2555876 0.1788181 0.167786 0.778815 0.12930745 0.2399587 0.2513738 0.54546456 0.4464942 0.5792084 0.4028023 0.442062 0.065661 0.0984677 0.682083 0.7869460 0.7932152 0.7303984 0.6347345 0.8313040 0.7430095 0.2539128 0.3246779 0.1632913 0.1839378 0.3240191 6 0.258980 0.387691 -1.3657e-01 11 0.237589 0.277297 -0.0397085 0.99999855 1.4727e-08 weaklyHypometh 1.00000 1.4727e-05 weaklyHypometh 1.0000000 0.00028292 weaklyHypometh 1 0.23179 insignificant -0.17331140 0.0392382 weaklyHypometh 1.00000 insignificant 0.254874 0.7370690 -0.48056468 11 0.224905 0.740444 -0.51553842 1.0000e+00 1.9850e-66 hypomethylated 1.0000e+00 9.9251e-64 hypomethylated 1.0000e+00 1.2796e-23 hypomethylated 1.0000e+00 6.3980e-21 hypomethylated -4.7179e-01 7.1849e-11 hypomethylated 1.1975e-08 hypomethylated 0.259259 0.2768464 -0.05828315 11 0.276596 0.296809 -0.02021251 9.9605e-01 8.8617e-05 weaklyHypometh 1.0000e+00 6.8167e-03 weaklyHypometh 9.8737e-01 3.7731e-02 weaklyHypometh 1.0000e+00 6.3950e-01 insignificant -6.4574e-02 1.4406e-01 insignificant 9.4648e-01 insignificant 0.388742 0.7370690 -0.34559926 11 0.403938 0.740444 -0.33650535 9.9998e-01 6.7391e-16 hypomethylated 1.0000e+00 1.1232e-13 hypomethylated 1.0000e+00 2.4709e-09 hypomethylated 1.0000e+00 6.4623e-07 hypomethylated -2.9848e-01 1.3826e-03 weaklyHypometh 2.0038e-02 weaklyHypometh 0.388508 0.2768464 0.09522860 11 0.391479 0.296809 0.09467007 7.5547e-02 1.0000e+00 insignificant 6.2956e-01 1.0000e+00 insignificant 4.9193e-02 1.0000e+00 weaklyHypermeth 5.8277e-01 1.0000e+00 insignificant 0.10873761 1.7227e-01 insignificant 1.0000e+00 insignificant 0.7370690 0.2317368 0.47458278 11 0.740444 0.292087 0.4483563 3.8942e-22 1.0000e+00 hypermethylated 1.0511e-19 1.0000e+00 hypermethylated 1.2366e-12 1.0000e+00 hypermethylated 6.1832e-10 1.0000e+00 hypermethylated 0.4072153 2.5520e-06 hypermethylated 0.00065078 hypermethylated chr22 18117596 18118596 56300 GP1BB ENSG00000203618 0.7402875 213 9 0.460938 219 10 0.560547 254 12 0.5282369 153 7 0.6400971 163 10 0.633907 193 9 0.579839 268 12 0.7038495 164 11 0.7041466 208 10 0.7075056 176 10 0.857683 309 11 0.644773 165 8 0.6528966 229 12 0.571429 8 0 0.654120 210 8 0.6663965 198 8 0.6686076 250 8 0.6712623 292 6 0.557580 272 12 0.619563 208 11 0.848091 188 10 0.5762500 105 7 0.713866 175 12 0.718648 147 10 0.8013718 221 7 0.6963500 174 10 0.741356 141 12 0.6751379 134 10 0.697132 171 11 0.4725184 239 12 0.546131 178 10 0.928966 194 9 0.5788189 247 10 0.5860606 328 11 0.6073823 212 8 0.3994575 130 5 0.5231688 142 7 0.5922663 213 13 0.626530 156 11 0.5233100 154 6 0.5312448 140 5 0.5628041 244 7 0.341912 84 4 0.8435078 0.683279 0.753161 0.6582848 0.8188086 0.7238322 0.8058592 0.7732415 0.7993305 0.7795073 0.850188 0.820537 0.7391052 0.767697 0.7930729 0.7997345 0.7039172 0.6321306 0.7392713 0.713631 0.892497 0.63151981 0.7170279 0.7460650 0.83475208 0.7966835 0.8689750 0.9264279 0.754220 0.729032 0.7412041 0.925299 0.6819390 0.6560826 0.6534350 0.4793004 0.6664191 0.6397768 0.6393593 0.6346899 0.6296681 0.6566586 0.5995640 2 0.710253 0.742857 -2.9690e-02 10 0.580233 0.624517 -0.0442839 0.93498211 4.8640e-02 weaklyHypometh 1.00000 7.4368e-01 insignificant 0.9995590 0.01866964 weaklyHypometh 1 0.69147 insignificant -0.06013499 0.1648886 insignificant 1.00000 insignificant 0.709569 0.5963808 0.10962526 12 0.549694 0.540546 0.00914858 1.4518e-04 7.5731e-01 weaklyHypermeth 1.0370e-03 1.0000e+00 weaklyHypermeth 7.9005e-03 9.9412e-01 weaklyHypermeth 6.3713e-02 1.0000e+00 weaklyHypermeth 9.3324e-02 3.3630e-02 weaklyHypermeth 2.6432e-01 insignificant 0.710222 0.6525097 0.09650967 8 0.602326 0.542152 0.06017352 5.1201e-06 9.9666e-01 weaklyHypermeth 1.4629e-04 1.0000e+00 weaklyHypermeth 1.1233e-03 9.9943e-01 weaklyHypermeth 2.8082e-02 1.0000e+00 weaklyHypermeth 1.2402e-01 5.6257e-02 insignificant 5.6825e-01 insignificant 0.742622 0.5968504 0.13356115 10 0.617963 0.540546 0.07741750 8.8613e-04 9.9042e-01 weaklyHypermeth 6.2403e-03 1.0000e+00 weaklyHypermeth 7.3862e-05 9.9990e-01 weaklyHypermeth 1.1363e-03 1.0000e+00 weaklyHypermeth 1.5346e-01 6.5539e-03 weaklyHypermeth 7.1238e-02 weaklyHypermeth 0.742733 0.6520619 0.12530547 6 0.615257 0.516716 0.09854110 8.8553e-06 9.8448e-01 weaklyHypermeth 3.1626e-04 1.0000e+00 weaklyHypermeth 5.1363e-05 9.9943e-01 weaklyHypermeth 2.8535e-03 1.0000e+00 weaklyHypermeth 0.18415816 1.3272e-02 weaklyHypermeth 3.2371e-01 insignificant 0.5957278 0.6512227 0.02823268 8 0.507651 0.489521 0.0181302 6.9846e-01 9.9537e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4205e-01 9.9978e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0306990 6.0736e-01 insignificant 1.00000000 insignificant chr22 18247496 18248496 56308 GNB1L ENSG00000185838 0.8064979 193 5 0.591745 85 5 0.769524 74 5 0.8700061 185 5 0.7000000 8 0 0.896753 150 5 0.854545 37 5 0.7768530 90 5 0.7816527 51 5 0.7938889 61 5 0.889535 110 5 0.713333 32 5 0.7946992 95 5 NA 0 0 0.890441 53 5 0.8166667 13 0 0.4400000 25 5 0.8283343 180 5 0.773329 63 5 0.739035 122 5 0.648810 46 4 0.7781511 77 5 0.818947 71 5 0.866667 49 5 0.8418182 39 5 0.6846956 173 5 0.631505 67 5 0.6028571 22 2 0.829192 69 5 0.9540749 109 5 0.948990 98 5 0.809922 151 5 0.7440000 74 5 0.9250000 48 5 0.5155065 148 3 0.8111111 36 5 0.7750000 25 3 0.9528659 148 5 0.811897 89 5 0.8642077 209 5 0.8373398 153 5 0.8614469 103 5 0.882591 118 5 0.8265401 0.557289 0.767268 0.8704670 0.7184466 0.9000410 0.8870256 0.7775372 0.7891477 0.8338457 0.895046 0.711327 0.7957132 NA 0.9149058 0.8252427 0.4310680 0.8298302 0.8033139 0.757725 0.652681 0.76987343 0.8458099 0.8802589 0.84639600 0.6813380 0.6442558 0.6248266 0.821702 0.956387 0.9506718 0.811601 0.7749515 0.9199029 0.5880182 0.7853290 0.8143204 0.9612804 0.7987603 0.8601941 0.8229864 0.8598056 0.8692360 0 0.793485 0.802266 -1.0648e-02 5 0.797644 0.807259 -0.0096148 0.73202808 4.5883e-01 insignificant 1.00000 1.0000e+00 insignificant 0.3633103 0.65400922 insignificant 1 1.00000 insignificant -0.00953900 0.8247463 lowCoverage 1.00000 lowCoverage 0.793485 0.7473904 0.05042969 5 0.797644 0.752453 0.04519128 1.1393e-01 8.4715e-01 insignificant 4.7274e-01 1.0000e+00 insignificant 8.8896e-01 3.2493e-02 inconclusive 1.0000e+00 9.2837e-01 insignificant -1.2150e-02 8.6512e-01 lowCoverage 1.0000e+00 lowCoverage 0.793485 0.8556548 -0.06457657 5 0.797644 0.856908 -0.05926335 2.7276e-01 1.7081e-03 weaklyHypometh 1.0000e+00 6.2314e-02 weaklyHypometh 3.1530e-01 1.9235e-03 weaklyHypometh 1.0000e+00 8.7432e-02 weaklyHypometh -7.6400e-02 1.2643e-02 lowCoverage 2.3413e-01 lowCoverage 0.802266 0.7473904 0.05755108 5 0.807259 0.752453 0.05480604 1.9924e-01 9.5036e-01 insignificant 7.8021e-01 1.0000e+00 insignificant 9.6000e-01 1.1558e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -2.6114e-03 9.7218e-01 lowCoverage 1.0000e+00 lowCoverage 0.802266 0.8556548 -0.05611250 5 0.807259 0.856908 -0.04964859 7.1461e-01 8.8751e-03 weaklyHypometh 1.0000e+00 3.6979e-01 insignificant 7.4560e-01 9.4440e-03 weaklyHypometh 1.0000e+00 5.5553e-01 insignificant -0.06686066 8.8011e-02 lowCoverage 8.8900e-01 lowCoverage 0.7473904 0.8556548 -0.09965393 5 0.752453 0.856908 -0.1044546 9.8858e-01 5.7807e-02 insignificant 1.0000e+00 3.0425e-01 insignificant 2.4260e-01 7.4397e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0642492 3.6642e-01 lowCoverage 1.00000000 lowCoverage chr22 18259196 18260196 56309 ENSG00000217984 0.5930047 171 6 0.652397 118 6 0.602249 170 6 0.5967262 60 6 0.7319289 94 6 0.800263 249 6 0.685004 154 6 0.6785774 103 6 0.7252870 119 6 0.7211785 150 6 0.670294 212 6 0.811903 176 6 0.4680156 188 6 NA 0 0 0.587067 160 6 0.7850642 166 6 0.7438009 156 6 0.6916667 101 6 0.669975 184 6 0.601595 302 6 0.829029 111 6 0.4682033 104 6 0.779023 200 6 0.688283 115 3 0.8555556 20 2 0.5626604 139 6 0.520775 171 6 0.7667353 80 6 0.654739 108 6 0.4439680 148 6 0.579010 145 6 0.817062 299 6 0.5520833 111 6 0.4939005 133 6 0.6523810 26 3 0.0449735 80 6 0.6787055 108 6 0.1804212 169 6 0.402929 196 6 0.5398954 241 6 0.5223495 101 6 0.5039871 191 6 0.540884 109 6 0.5691702 0.610376 0.547041 0.5353766 0.6876375 0.7807885 0.6490872 0.6246096 0.6442332 0.7093059 0.644617 0.816973 0.4457257 NA 0.5274676 0.7527000 0.7061167 0.6804965 0.6054704 0.601487 0.807101 0.47254475 0.7370093 0.6876692 0.81087470 0.5337764 0.5237400 0.7544813 0.641329 0.396291 0.5375140 0.800215 0.5020833 0.4649558 0.6146508 0.0341664 0.6579030 0.1619924 0.3892499 0.5172394 0.5535196 0.4764612 0.5181650 6 0.675239 0.649390 1.1539e-03 6 0.678575 0.672847 0.0057281 0.48105954 7.6870e-01 insignificant 1.00000 1.0000e+00 insignificant 0.4805198 0.70337702 insignificant 1 1.00000 insignificant 0.01077262 0.8206653 insignificant 1.00000 insignificant 0.675239 0.3875598 0.28003007 6 0.678575 0.392960 0.28561474 4.6022e-13 1.0000e+00 hypermethylated 7.3050e-12 1.0000e+00 hypermethylated 6.5384e-05 9.9910e-01 hypermethylated 9.0811e-04 1.0000e+00 hypermethylated 2.4078e-01 7.3499e-02 insignificant 4.8355e-01 insignificant 0.675239 0.5059666 0.17583665 6 0.678575 0.498354 0.18022085 1.2825e-10 1.0000e+00 weaklyHypermeth 1.2825e-08 1.0000e+00 weaklyHypermeth 4.3619e-08 9.9997e-01 weaklyHypermeth 5.4524e-06 1.0000e+00 weaklyHypermeth 1.7252e-01 4.1006e-04 weaklyHypermeth 2.7943e-02 weaklyHypermeth 0.649390 0.3875598 0.27447044 6 0.672847 0.392960 0.27988669 6.1420e-08 1.0000e+00 hypermethylated 7.7747e-07 1.0000e+00 hypermethylated 4.9928e-04 9.9993e-01 hypermethylated 6.1639e-03 1.0000e+00 hypermethylated 2.3001e-01 8.7190e-02 insignificant 5.3116e-01 insignificant 0.649390 0.5059666 0.16952910 6 0.672847 0.498354 0.17449280 4.5813e-06 1.0000e+00 weaklyHypermeth 1.8325e-04 1.0000e+00 weaklyHypermeth 1.8493e-04 1.0000e+00 weaklyHypermeth 8.4058e-03 1.0000e+00 weaklyHypermeth 0.16174449 5.2004e-03 weaklyHypermeth 2.2262e-01 insignificant 0.3875598 0.5059666 -0.10430015 6 0.392960 0.498354 -0.1053939 9.7104e-01 3.4390e-02 weaklyHypometh 1.0000e+00 2.0333e-01 insignificant 9.4876e-01 9.2000e-02 insignificant 1.0000e+00 5.4438e-01 insignificant -0.0682649 5.5806e-01 insignificant 1.00000000 insignificant chr22 18326696 18327696 56310 COMT ENSG00000093010 0.0970919 338 9 0.124057 230 7 0.140673 298 8 0.1375828 426 7 0.0029240 146 8 0.264082 505 8 0.013270 275 8 0.0069358 308 8 0.0025000 485 8 0.0039121 478 8 0.027328 267 10 0.124106 262 8 0.0019231 424 10 0.090909 185 8 0.011623 477 8 0.0077037 273 10 0.1428571 96 6 0.1614742 424 9 0.092624 234 9 0.110114 301 8 0.000000 104 10 0.0000000 237 8 0.041716 262 10 0.116294 217 8 0.0555556 164 8 0.0833333 361 10 0.046875 198 10 0.0173801 224 10 0.090909 231 9 0.0192022 412 8 0.156678 311 8 0.052277 315 7 0.1050582 184 10 0.0767361 169 8 0.2500000 25 1 0.1507937 78 8 0.0705026 156 8 0.2066013 247 8 0.094138 467 10 0.2712238 353 8 0.0024155 288 7 0.2059375 328 7 0.071765 411 6 0.0135820 0.023396 0.018758 0.0189019 0.0080135 0.0097139 0.0046708 0.0066198 0.0060902 0.0076457 0.011469 0.025207 0.0013013 0.000000 0.0046597 0.0196241 0.0029779 0.0131079 0.0057455 0.014193 0.000000 0.00508849 0.0312490 0.0085365 0.01973684 0.0087719 0.0000000 0.0199353 0.000000 0.012484 0.0161799 0.021711 0.0530661 0.0352914 NA 0.0491407 0.0590360 0.0916035 0.0172020 0.0141899 0.0045358 0.0091812 0.0268422 6 0.013060 0.017474 -4.1625e-03 10 0.086886 0.075727 0.0111588 0.94512995 3.7469e-01 insignificant 1.00000 1.0000e+00 insignificant 0.6915412 0.71746727 insignificant 1 1.00000 insignificant 0.02149954 0.3251449 insignificant 1.00000 insignificant 0.013066 0.0756694 -0.06279851 8 0.099298 0.119365 -0.02006657 9.5750e-01 8.8771e-20 weaklyHypometh 1.0000e+00 1.2682e-17 weaklyHypometh 9.9295e-01 1.3603e-06 weaklyHypometh 1.0000e+00 9.7165e-05 weaklyHypometh -6.5097e-02 9.0862e-02 insignificant 5.6088e-01 insignificant 0.013072 0.0178668 -0.00472845 9 0.106937 0.147349 -0.04041227 7.1413e-01 2.0257e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.6952e-01 2.5645e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -5.0911e-02 3.6452e-01 insignificant 1.0000e+00 insignificant 0.017492 0.0756694 -0.05598773 8 0.086545 0.119365 -0.03281949 9.6141e-01 4.3527e-11 weaklyHypometh 1.0000e+00 4.8364e-09 weaklyHypometh 9.9699e-01 2.4192e-05 weaklyHypometh 1.0000e+00 2.0160e-03 weaklyHypometh -8.6597e-02 3.2643e-02 weaklyHypometh 2.5907e-01 insignificant 0.017509 0.0178668 -0.00172121 9 0.093203 0.147349 -0.05414618 4.9425e-01 1.0366e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.8215e-01 3.5961e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.07241090 2.1301e-01 insignificant 1.0000e+00 insignificant 0.0746791 0.0178668 0.05615507 7 0.090085 0.147349 -0.0572636 1.2572e-04 9.8189e-01 weaklyHypermeth 8.9798e-03 1.0000e+00 weaklyHypermeth 6.0789e-02 9.7627e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0141860 8.0997e-01 insignificant 1.00000000 insignificant chr22 18390596 18391596 56316 C22orf25 ENSG00000183597 0.8036163 521 9 0.768876 396 10 0.780301 185 8 0.8573569 472 9 0.8602155 205 9 0.762772 608 10 0.811253 210 8 0.7887588 272 9 0.6797507 220 9 0.7663067 271 8 0.712908 383 10 0.723133 119 5 0.9176086 268 9 0.678521 139 8 0.909688 237 9 0.9405239 87 5 0.8229730 479 7 0.7104673 524 10 0.762551 220 9 0.779746 398 10 0.827511 106 9 0.8045062 128 8 0.840976 302 9 0.781412 114 10 0.8477931 133 6 0.7219633 377 9 0.676308 146 9 0.6377089 99 8 0.790824 363 8 0.8199606 401 10 0.824920 459 10 0.809965 563 10 0.7093795 358 10 0.7012721 172 7 0.7590119 235 7 0.8296131 73 5 0.7076692 178 9 0.7800938 438 10 0.732455 472 8 0.7238755 485 9 0.8692126 604 9 0.7655175 483 8 0.777259 583 9 0.8296704 0.756184 0.854206 0.8679326 0.8683652 0.8156118 0.7783677 0.8112768 0.7987854 0.8308343 0.821970 0.800863 0.8819868 0.877834 0.8721193 0.8789705 0.8477293 0.8175091 0.8543064 0.842998 0.895801 0.84163158 0.8207507 0.8599782 0.83070303 0.8123914 0.7214371 0.8097776 0.820446 0.848305 0.8684039 0.843197 0.7617418 0.7234563 0.8374774 0.8180201 0.7219247 0.8227629 0.8041810 0.8558172 0.8586125 0.8395855 0.8558572 5 0.847900 0.851144 5.5879e-05 9 0.701123 0.804784 -0.1036608 0.48675415 9.1132e-01 insignificant 1.00000 1.0000e+00 insignificant 0.4337645 0.19938348 insignificant 1 1.00000 insignificant 0.00987896 0.7048415 insignificant 1.00000 insignificant 0.848260 0.8246217 0.02956653 9 0.768164 0.729295 0.03886888 3.3796e-04 6.0763e-01 weaklyHypermeth 2.3148e-03 1.0000e+00 weaklyHypermeth 1.1295e-02 8.0641e-01 weaklyHypermeth 8.6301e-02 1.0000e+00 weaklyHypermeth 4.4026e-02 1.2677e-01 insignificant 7.0495e-01 insignificant 0.847987 0.8728588 -0.01870852 9 0.709074 0.772713 -0.06363853 9.0961e-01 7.1944e-02 insignificant 1.0000e+00 9.0463e-01 insignificant 8.6818e-01 2.2933e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.8202e-02 5.7235e-01 insignificant 1.0000e+00 insignificant 0.850817 0.8246217 0.02931599 9 0.739711 0.729295 0.01041665 3.4098e-02 8.4748e-01 weaklyHypermeth 1.6797e-01 1.0000e+00 insignificant 1.6327e-02 9.6565e-01 weaklyHypermeth 1.0958e-01 1.0000e+00 insignificant 3.4147e-02 2.5351e-01 insignificant 1.0000e+00 insignificant 0.850910 0.8728588 -0.01907770 9 0.759734 0.772713 -0.01297905 8.1355e-01 1.0252e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.1440e-01 4.8986e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00832338 8.0310e-01 insignificant 1.0000e+00 insignificant 0.8246217 0.8734756 -0.04973582 9 0.729295 0.809328 -0.0800328 9.9497e-01 2.0478e-03 weaklyHypometh 1.0000e+00 1.7366e-02 weaklyHypometh 9.8904e-01 3.7017e-02 weaklyHypometh 1.0000e+00 2.6068e-01 insignificant -0.0258241 4.5947e-01 insignificant 1.00000000 insignificant chr22 18782096 18783096 56324 PI4KAP1 ENSG00000215513 0.7683053 118 4 0.673794 211 6 0.742945 138 6 0.6858009 100 4 0.6497374 96 6 0.765646 282 6 0.736416 125 6 0.6605428 99 6 0.6640512 99 6 0.7479167 77 6 0.674570 221 6 0.791667 24 4 0.5404762 56 4 0.691270 50 6 0.665681 107 6 0.5666667 16 2 NA 0 0 0.7027343 134 4 0.610015 145 6 0.674698 174 6 0.702991 74 6 0.0833333 12 2 0.771249 123 6 0.673504 64 6 0.7000000 23 4 0.6727774 185 6 0.646164 150 6 0.5868283 133 6 0.713842 258 6 0.6808189 210 6 0.640079 167 6 0.872258 197 6 0.7766647 166 6 0.7682540 114 6 0.7138520 245 6 0.5000000 2 0 0.6840782 89 6 0.5436628 224 6 0.782726 107 4 0.7072852 204 6 0.5987277 78 4 0.6555556 108 4 0.716435 72 4 0.7466505 0.720427 0.778460 0.7393646 0.6846000 0.8037357 0.7534415 0.7155286 0.7094156 0.7794355 0.718993 0.851089 0.7064516 0.711290 0.7217835 0.6354839 NA 0.7285041 0.6608802 0.721304 0.730045 0.66565357 0.8110008 0.6780811 0.74838710 0.7147889 0.6834357 0.7403613 0.752382 0.731726 0.6876344 0.875734 0.7724673 0.7413210 0.7200672 0.6113537 0.7614852 0.5461288 0.7850786 0.7276831 0.6703559 0.7268817 0.7116935 0 0.783891 0.750000 5.4880e-03 6 0.597412 0.600282 -0.0028700 0.65773108 7.7754e-01 insignificant 1.00000 1.0000e+00 insignificant 0.7521690 0.63496286 insignificant 1 1.00000 insignificant 0.03957071 0.5010087 insignificant 1.00000 insignificant 0.783891 0.7380952 0.06757771 6 0.597412 0.598137 -0.00072557 8.7680e-06 2.1124e-02 weaklyHypermeth 8.1185e-05 5.7922e-01 weaklyHypermeth 6.6639e-02 8.9052e-02 insignificant 3.8970e-01 1.0000e+00 insignificant 2.0473e-02 6.9578e-01 insignificant 1.0000e+00 insignificant 0.784236 0.8611599 0.00360738 4 0.696980 0.696129 0.00085069 3.8844e-01 4.8995e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 2.8733e-01 6.9920e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -7.2546e-03 8.3994e-01 lowCoverage 1.0000e+00 lowCoverage 0.750000 0.7380952 0.06721637 6 0.600282 0.598137 0.00214441 1.4994e-02 1.5710e-01 weaklyHypermeth 8.1050e-02 1.0000e+00 weaklyHypermeth 2.1743e-01 2.9454e-01 insignificant 9.6635e-01 1.0000e+00 insignificant -1.9098e-02 7.9652e-01 insignificant 1.0000e+00 insignificant 0.750470 0.8611599 -0.00887554 4 0.700328 0.696129 0.00419899 5.3613e-01 5.0648e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 3.6491e-01 4.8692e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.04682528 4.6991e-01 lowCoverage 1.0000e+00 lowCoverage 0.7389750 0.8611599 -0.10702863 4 0.697827 0.696129 0.0016972 4.6872e-01 3.7478e-02 lowCoverage 1.0000e+00 2.1416e-01 lowCoverage 3.6278e-01 2.1627e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0277272 6.3756e-01 lowCoverage 1.00000000 lowCoverage chr22 18788396 18789396 56327 PI4KAP1 ENSG00000215513 0.8971510 163 9 0.821638 671 9 0.545407 268 9 0.8998333 253 9 0.8427172 142 9 0.800108 436 9 0.778792 183 9 0.9052483 196 9 0.8089835 169 7 0.9578947 143 9 0.897453 392 9 0.835045 69 6 0.8416179 168 6 0.964124 130 6 0.897006 161 6 0.8180798 78 6 0.1250000 11 1 0.7085341 326 8 0.870558 296 9 0.817394 267 9 0.804110 117 9 0.6347643 62 6 0.787440 186 9 0.934727 74 6 0.7317394 163 8 0.9054978 464 9 0.835362 214 9 0.8571901 180 6 0.881646 421 9 0.9037717 711 9 0.895642 388 9 0.883407 313 9 0.3375511 438 9 0.3148148 55 3 0.4032127 197 7 0.3777778 63 5 0.1865868 384 9 0.4697437 457 9 0.762786 149 8 0.6866837 206 9 0.8617250 183 8 0.8331958 153 8 0.795414 145 9 0.8430298 0.793942 0.581563 0.8707599 0.7843470 0.8794833 0.8564810 0.8562060 0.8045278 0.8995765 0.859287 0.797637 0.8259244 0.916534 0.9206787 0.7373318 0.6096288 0.6336775 0.8426752 0.862957 0.801976 0.62522211 0.8258196 0.9090630 0.68070718 0.8902417 0.7563492 0.8709712 0.853618 0.904111 0.8889668 0.860007 0.2063324 0.1966794 0.2740798 0.2097063 0.1312677 0.2642350 0.7289844 0.6690126 0.8373184 0.7615591 0.7220018 4 0.823087 0.865169 -4.1672e-02 9 0.815358 0.851719 -0.0363617 0.99906701 1.6901e-02 weaklyHypometh 1.00000 4.6948e-01 insignificant 0.9453513 0.41124679 insignificant 1 1.00000 insignificant -0.03631209 0.4561304 insignificant 1.00000 insignificant 0.823087 0.2810540 0.55653343 9 0.815358 0.331972 0.48338575 2.3040e-58 1.0000e+00 hypermethylated 4.6080e-56 1.0000e+00 hypermethylated 1.5174e-19 1.0000e+00 hypermethylated 7.5872e-17 1.0000e+00 hypermethylated 4.5335e-01 4.1742e-07 hypermethylated 2.6089e-05 hypermethylated 0.823764 0.7547847 0.06595286 9 0.845347 0.783820 0.06152675 2.0956e-03 9.5898e-01 weaklyHypermeth 3.1752e-02 1.0000e+00 weaklyHypermeth 1.0222e-03 7.3695e-01 weaklyHypermeth 2.6211e-02 1.0000e+00 weaklyHypermeth 1.3668e-02 7.9195e-01 insignificant 1.0000e+00 insignificant 0.865169 0.2810540 0.59421076 9 0.851719 0.331972 0.51974748 1.7470e-55 1.0000e+00 hypermethylated 5.8234e-53 1.0000e+00 hypermethylated 7.5133e-18 1.0000e+00 hypermethylated 3.7567e-15 1.0000e+00 hypermethylated 4.8966e-01 1.9382e-06 hypermethylated 1.2921e-04 hypermethylated 0.865794 0.7547847 0.11569703 9 0.882863 0.783820 0.09904267 1.8912e-07 9.8527e-01 weaklyHypermeth 1.1125e-05 1.0000e+00 weaklyHypermeth 6.0655e-04 6.9382e-01 weaklyHypermeth 2.1662e-02 1.0000e+00 weaklyHypermeth 0.04998030 2.3330e-01 insignificant 1.0000e+00 insignificant 0.2813090 0.7547847 -0.52528639 9 0.346635 0.783820 -0.4371847 1.0000e+00 1.5114e-21 hypomethylated 1.0000e+00 1.6793e-19 hypomethylated 1.0000e+00 8.2653e-11 hypomethylated 1.0000e+00 2.7551e-08 hypomethylated -0.4396798 1.0888e-05 hypomethylated 0.00141369 hypomethylated chr22 18803196 18804196 56331 PI4KAP1 ENSG00000215513 0.8196343 155 6 0.788223 91 4 0.721909 120 4 0.8642465 131 3 0.7995195 101 4 0.854478 106 7 0.901407 100 4 0.7428571 32 4 0.7708333 62 4 0.8658824 77 4 0.755220 121 4 0.817823 121 4 0.7388029 68 4 NA 0 0 0.875343 63 4 0.8303531 119 4 0.8978175 86 4 0.5085340 157 3 0.874967 90 6 0.887039 72 3 0.926389 36 4 0.5833333 6 0 0.721566 66 7 0.805769 38 4 NA 0 0 0.8136178 91 7 0.893137 57 4 0.9082407 87 4 0.641234 50 4 0.8571429 74 6 0.779932 60 6 0.880952 65 6 0.7472667 78 4 0.8184524 63 4 0.8921610 93 6 0.8573517 174 3 0.8434524 69 4 0.8692641 77 7 0.805980 97 3 0.7226190 114 6 0.7900044 144 3 0.8750000 27 3 0.900000 61 3 0.8750000 0.854885 0.770238 1.0000000 0.8755499 0.8597884 0.9018759 0.8000000 0.7277778 0.8800000 0.780769 0.827273 0.7628483 NA 0.9107143 0.8293597 0.8915344 0.3333333 0.9431043 0.833333 0.901852 0.58333333 0.7559219 0.8243590 NA 0.7930283 0.8575163 0.8776543 0.712121 0.916667 0.7603175 0.793651 0.7858293 0.8412698 0.8756614 0.8333333 0.7912698 0.9060606 0.6666667 0.7638889 0.9583333 0.8888889 0.9583333 0 0.823718 0.821940 -1.5920e-03 4 0.811203 0.820084 -0.0088805 0.44700945 6.6399e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.6168433 0.74585904 lowCoverage 1 1.00000 lowCoverage 0.00501824 0.9010139 lowCoverage 1.00000 lowCoverage 0.823718 0.8628159 -0.03732348 7 0.811203 0.836795 -0.02559187 5.4698e-01 3.9896e-03 weaklyHypometh 1.0000e+00 1.4377e-01 insignificant 8.5844e-01 1.4763e-02 weaklyHypometh 1.0000e+00 5.4676e-01 insignificant -3.1945e-02 2.9648e-01 lowCoverage 1.0000e+00 lowCoverage 0.823718 0.7855530 0.03076541 3 0.811203 0.776953 0.03425066 8.0230e-02 1.9858e-01 lowCoverage 7.2279e-01 1.0000e+00 lowCoverage 9.2181e-01 1.0564e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -1.2674e-02 7.4737e-01 lowCoverage 1.0000e+00 lowCoverage 0.821940 0.8628159 -0.02295886 4 0.820084 0.836795 -0.01671141 6.4493e-01 3.8605e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.2850e-01 1.6203e-02 lowCoverage 1.0000e+00 8.0730e-01 lowCoverage -3.6963e-02 3.6563e-01 lowCoverage 1.0000e+00 lowCoverage 0.821940 0.7855530 0.04434488 0 0.820084 0.776953 0.04313111 2.0307e-01 3.9027e-01 noCoverage 1.0000e+00 1.0000e+00 noCoverage 8.2136e-01 8.7292e-02 noCoverage 1.0000e+00 1.0000e+00 noCoverage -0.01769218 7.0860e-01 lowCoverage 1.0000e+00 lowCoverage 0.8628159 0.7855530 0.09266361 3 0.836795 0.776953 0.0598425 3.0794e-02 8.4899e-01 lowCoverage 8.5538e-01 1.0000e+00 lowCoverage 2.2153e-01 6.8055e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0192706 6.2581e-01 lowCoverage 1.00000000 lowCoverage chr22 18823696 18824696 56332 PI4KAP1 ENSG00000215513 0.8533400 119 4 0.714493 165 5 0.573427 100 8 0.9774846 165 4 0.8898810 45 3 0.712161 97 4 0.820159 46 4 0.8705065 89 5 0.9383333 81 7 0.9534799 85 5 0.877163 139 10 0.769444 43 5 0.8106824 136 9 0.763889 20 1 0.616667 71 8 0.8159091 45 3 1.0000000 12 0 0.8230505 74 5 0.819638 136 8 0.925029 65 7 0.892857 42 4 NA 0 0 0.797009 95 4 0.875000 26 0 0.9791667 21 1 0.7505544 107 7 0.874579 88 7 0.8500000 45 4 0.675102 202 7 0.7190088 141 7 0.806392 109 5 0.816277 108 10 0.7359325 145 8 0.7568974 136 10 0.7931695 95 8 1.0000000 4 0 0.6118548 79 9 0.8978387 124 8 0.574261 206 5 0.7737939 280 9 0.7253110 162 4 0.8149351 63 2 0.827714 181 4 0.8988553 0.731103 0.713336 0.9452434 0.9244160 0.8725888 0.7791854 0.8824454 0.9025157 0.9168913 0.813861 0.833333 0.8726073 0.718274 0.7997904 0.7564322 0.9519054 0.7907178 0.9106958 0.865497 0.973046 NA 0.8810273 0.9764151 0.87906979 0.7592226 0.8806937 0.9339623 0.868841 0.665030 0.7944392 0.906842 0.7493217 0.6130866 0.8124083 NA 0.6787797 0.8147198 0.8577850 0.8748538 0.8465806 0.8583578 0.8988929 0 0.863164 0.848577 1.5042e-02 7 0.832304 0.811654 0.0206498 0.14452326 7.4392e-01 insignificant 1.00000 1.0000e+00 insignificant 0.6663188 0.45328333 insignificant 1 1.00000 insignificant 0.00478728 0.8958616 lowCoverage 1.00000 lowCoverage 0.863164 0.8044597 0.07190949 8 0.832304 0.708957 0.12334694 1.8860e-05 8.4369e-01 weaklyHypermeth 1.6544e-04 1.0000e+00 weaklyHypermeth 8.6632e-04 9.4454e-01 weaklyHypermeth 8.6632e-03 1.0000e+00 weaklyHypermeth 2.6955e-02 6.6933e-01 insignificant 1.0000e+00 insignificant 0.863164 0.9103139 -0.00660684 4 0.832304 0.729189 0.10311480 1.0021e-03 4.0913e-01 lowCoverage 1.7581e-02 1.0000e+00 lowCoverage 1.7609e-01 5.6259e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.3034e-02 1.5893e-01 lowCoverage 1.0000e+00 lowCoverage 0.848577 0.8044597 0.02611852 7 0.811654 0.708957 0.10269717 7.4532e-04 4.0118e-01 weaklyHypermeth 5.4009e-03 1.0000e+00 weaklyHypermeth 2.5103e-03 9.3346e-01 weaklyHypermeth 2.4854e-02 1.0000e+00 weaklyHypermeth 2.2167e-02 7.2615e-01 lowCoverage 1.0000e+00 lowCoverage 0.848577 0.9103139 0.01429467 3 0.811654 0.729189 0.08246503 1.7547e-02 5.7586e-01 lowCoverage 1.9073e-01 1.0000e+00 lowCoverage 8.9374e-02 8.5251e-01 lowCoverage 9.5079e-01 1.0000e+00 lowCoverage 0.07824652 1.8319e-01 lowCoverage 1.0000e+00 lowCoverage 0.8044597 0.9103139 -0.12574094 4 0.708957 0.729189 -0.0202321 2.1926e-02 9.2074e-05 lowCoverage 6.7171e-01 1.1804e-03 lowCoverage 6.4109e-01 1.1711e-03 lowCoverage 1.0000e+00 1.8018e-02 lowCoverage 0.0560791 4.5414e-01 lowCoverage 1.00000000 lowCoverage chr22 19113396 19114396 56335 USP41 ENSG00000161133 0.3535038 1130 37 0.332264 1004 37 0.406453 1027 37 0.2790003 934 30 0.3986820 579 32 0.239763 1489 37 0.306114 981 34 0.4080398 721 34 0.3037781 1016 34 0.3047305 1146 34 0.399137 823 36 0.349073 807 37 0.3600059 897 34 0.254410 448 20 0.435997 970 32 0.2890688 720 32 0.1999530 502 27 0.3373578 1503 37 0.098833 992 35 0.358026 1113 37 0.505475 395 27 0.3142613 707 33 0.392823 789 37 0.301291 448 35 0.2898680 1111 21 0.4462353 1061 38 0.350531 614 37 0.3669338 552 36 0.336402 823 32 0.3029032 1163 34 0.069166 1370 37 0.360322 1338 34 0.6428894 730 37 0.7413318 754 34 0.8659012 677 23 0.6594063 445 28 0.6743641 471 32 0.6952163 878 37 0.242141 1270 37 0.3140614 1196 37 0.2687589 842 35 0.3472629 1405 37 0.305738 984 34 0.2757077 0.256961 0.377464 0.1835947 0.3071651 0.1867628 0.2519951 0.2810688 0.2483957 0.2713770 0.312854 0.335824 0.2953784 0.227825 0.3168122 0.2424064 0.1571559 0.2988757 0.0537378 0.285276 0.454935 0.22417877 0.3482876 0.2161575 0.26132941 0.3667427 0.2494539 0.3239868 0.253999 0.260412 0.0414723 0.305640 0.6985270 0.7391417 0.7985445 0.6552574 0.7759338 0.6851006 0.2156221 0.2606844 0.2205336 0.2830085 0.2659773 30 0.287759 0.300463 -4.4624e-03 37 0.341059 0.327957 0.0131020 0.78816055 8.9027e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9515860 0.85598189 insignificant 1 1.00000 insignificant -0.01564162 0.6632717 insignificant 1.00000 insignificant 0.287623 0.7721871 -0.44374660 37 0.343961 0.642161 -0.29820000 1.0000e+00 1.2215e-188 hypomethylated 1.0000e+00 1.2215e-185 hypomethylated 1.0000e+00 2.6165e-52 hypomethylated 1.0000e+00 2.6165e-49 hypomethylated -3.9248e-01 6.0031e-06 hypomethylated 2.8345e-04 hypomethylated 0.287616 0.2629916 0.01464466 35 0.334788 0.292779 0.04200947 9.9104e-03 3.6175e-01 weaklyHypermeth 1.2545e-01 1.0000e+00 insignificant 2.3832e-02 7.9475e-01 weaklyHypermeth 3.5571e-01 1.0000e+00 insignificant 2.5117e-02 3.4636e-01 insignificant 1.0000e+00 insignificant 0.300184 0.7731646 -0.44153860 37 0.316050 0.655539 -0.33948931 1.0000e+00 7.8000e-116 hypomethylated 1.0000e+00 7.8000e-113 hypomethylated 1.0000e+00 1.1118e-41 hypomethylated 1.0000e+00 1.1118e-38 hypomethylated -3.7683e-01 1.7087e-06 hypomethylated 1.2205e-04 hypomethylated 0.300154 0.2631209 0.02079351 35 0.311883 0.307513 0.00437096 1.5371e-01 7.0103e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.7951e-01 9.8444e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.04075852 2.6858e-01 insignificant 1.0000e+00 insignificant 0.7736375 0.2630839 0.47113640 35 0.665909 0.305791 0.3601176 9.6367e-98 1.0000e+00 hypermethylated 9.6367e-95 1.0000e+00 hypermethylated 8.4149e-30 1.0000e+00 hypermethylated 8.4149e-27 1.0000e+00 hypermethylated 0.4175924 6.6161e-06 hypermethylated 0.00110268 hypermethylated chr22 19813696 19814696 56367 POM121L4P ENSG00000217261 0.8537873 527 12 0.682589 348 12 0.750068 343 12 0.8734860 482 12 0.8493532 507 12 0.759583 600 12 0.861853 546 12 0.8033623 448 10 0.8465135 356 8 0.8406102 527 12 0.779091 1000 12 0.853683 417 8 0.7846756 456 10 0.889601 90 8 0.829128 450 11 0.7875021 388 11 0.8750572 1617 8 0.8210508 320 12 0.836627 710 12 0.760267 619 12 0.869302 210 12 0.8417398 106 6 0.896878 396 12 0.752939 223 12 0.8350694 89 8 0.8078067 437 12 0.834812 356 12 0.8220883 164 9 0.776407 610 12 0.8239895 556 12 0.789492 631 12 0.848086 898 12 0.7783523 292 10 0.7450387 603 12 0.7288749 489 12 0.8928937 125 11 0.7915819 301 12 0.8371303 671 12 0.882856 759 12 0.9108234 650 12 0.8519414 534 12 0.9088716 421 12 0.816031 536 12 0.8118897 0.704611 0.752813 0.8454287 0.8165622 0.8062021 0.7846732 0.7795287 0.7650177 0.8236641 0.809286 0.814021 0.8073373 0.813963 0.7817653 0.7785091 0.8469350 0.8298189 0.7895091 0.797386 0.801449 0.81678487 0.8385278 0.8158299 0.78566558 0.7650900 0.7812382 0.7762425 0.751726 0.781896 0.7499461 0.809162 0.7333548 0.6901061 0.7258520 0.8371869 0.8128931 0.7593537 0.8746266 0.8907357 0.8394663 0.8764701 0.8724792 7 0.798902 0.806672 1.6081e-02 12 0.778017 0.815614 -0.0375966 0.08517940 5.3473e-01 insignificant 1.00000 1.0000e+00 insignificant 0.6844905 0.32399367 insignificant 1 1.00000 insignificant -0.00798969 0.6293097 insignificant 1.00000 insignificant 0.798939 0.7742846 0.05829857 12 0.786582 0.728140 0.05844227 7.9217e-07 9.9297e-01 weaklyHypermeth 8.0017e-06 1.0000e+00 weaklyHypermeth 1.1574e-02 9.7104e-01 weaklyHypermeth 8.6373e-02 1.0000e+00 weaklyHypermeth 2.1249e-02 4.6321e-01 insignificant 1.0000e+00 insignificant 0.798939 0.9044828 -0.04825788 12 0.786582 0.816433 -0.02985099 9.9876e-01 1.6061e-06 weaklyHypometh 1.0000e+00 3.0577e-04 weaklyHypometh 9.9982e-01 1.0474e-04 weaklyHypometh 1.0000e+00 1.1638e-02 weaklyHypometh -5.7210e-02 2.9392e-02 weaklyHypometh 3.9189e-01 insignificant 0.806548 0.7742846 0.04065913 12 0.801430 0.728140 0.07328994 7.8341e-05 9.6572e-01 weaklyHypermeth 6.5833e-04 1.0000e+00 weaklyHypermeth 7.9936e-03 9.7448e-01 weaklyHypermeth 6.2450e-02 1.0000e+00 weaklyHypermeth 2.9239e-02 3.1953e-01 insignificant 1.0000e+00 insignificant 0.806548 0.9044828 -0.06730344 12 0.801430 0.816433 -0.01500332 9.9935e-01 1.2017e-06 weaklyHypometh 1.0000e+00 3.0041e-04 weaklyHypometh 9.9349e-01 1.7441e-03 weaklyHypometh 1.0000e+00 2.1801e-01 insignificant -0.04922059 5.2418e-02 insignificant 7.0588e-01 insignificant 0.7742846 0.9044828 -0.10650085 12 0.728140 0.816433 -0.0882933 1.0000e+00 1.7422e-09 weaklyHypometh 1.0000e+00 5.8074e-08 weaklyHypometh 9.9975e-01 3.8226e-05 weaklyHypometh 1.0000e+00 1.3652e-03 weaklyHypometh -0.0784594 3.1815e-02 weaklyHypometh 0.28405950 insignificant chr22 20114096 20115096 56383 HIC2 ENSG00000169635 0.7010285 217 5 0.701752 136 5 0.560000 46 5 0.5571242 181 5 0.6954545 57 5 0.668462 85 5 0.691212 39 3 0.6211688 82 5 0.7111111 28 5 0.6166667 26 3 0.616429 113 5 0.500000 6 0 0.6117647 54 3 0.725000 37 5 0.666667 24 2 0.5500000 14 0 1.0000000 4 0 0.6240852 289 5 0.596471 71 5 0.734574 88 5 0.437500 13 0 0.7777778 9 0 0.673009 148 5 0.544444 35 3 0.7073913 74 3 0.7518382 82 5 0.675897 38 3 0.6500000 14 2 0.722092 122 5 0.7127576 98 5 0.716297 76 5 0.726455 84 5 0.5444848 95 5 0.6610802 74 5 0.6166667 54 5 0.5333333 11 0 0.5816667 56 5 0.6484848 90 5 0.722287 209 5 0.6820672 213 5 0.6589123 187 5 0.6527813 194 5 0.712203 207 5 0.6189826 0.616409 0.598485 0.6332739 0.6170799 0.6395688 0.6078972 0.6031484 0.5606061 0.6199495 0.590007 0.524259 0.6693405 0.691288 0.5328283 0.5454545 0.6315933 0.6104139 0.6355615 0.661812 0.604488 0.78125533 0.6152187 0.4234007 0.64256738 0.6280080 0.6225719 0.6650937 0.568306 0.675895 0.6517323 0.615200 0.5224059 0.6349699 0.5976431 0.5808081 0.5672980 0.6441690 0.6678005 0.6730456 0.5599682 0.6431794 0.6898904 0 0.631183 0.643127 -8.2741e-03 5 0.578250 0.631656 -0.0534058 0.89671172 3.7633e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9193392 0.46255709 insignificant 1 1.00000 insignificant -0.01717315 0.6371789 lowCoverage 1.00000 lowCoverage 0.631281 0.6000000 0.03996193 5 0.659550 0.610618 0.04893212 5.7275e-02 9.7365e-01 insignificant 2.6639e-01 1.0000e+00 insignificant 1.4385e-01 8.4259e-01 insignificant 7.3394e-01 1.0000e+00 insignificant 5.9829e-02 7.7197e-02 lowCoverage 5.0128e-01 lowCoverage 0.631281 0.6495050 -0.02679463 5 0.659550 0.687080 -0.02752976 5.8648e-01 7.4979e-02 insignificant 1.0000e+00 9.0463e-01 insignificant 4.5167e-01 1.4522e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -2.8202e-02 3.0864e-01 lowCoverage 1.0000e+00 lowCoverage 0.642586 0.6000000 0.04682998 5 0.684318 0.610618 0.07370028 1.1461e-02 9.3571e-01 weaklyHypermeth 6.2970e-02 1.0000e+00 weaklyHypermeth 3.9666e-02 6.3250e-01 weaklyHypermeth 2.3333e-01 1.0000e+00 insignificant 7.7002e-02 4.3409e-02 lowCoverage 3.1487e-01 lowCoverage 0.642586 0.6495050 -0.01858448 5 0.684318 0.687080 -0.00276160 1.3502e-01 1.8360e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.9925e-01 3.1483e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01102842 7.2519e-01 lowCoverage 1.0000e+00 lowCoverage 0.6000000 0.6495050 -0.06780398 5 0.610618 0.687080 -0.0764619 9.1315e-01 8.2912e-03 weaklyHypometh 1.0000e+00 5.8803e-02 weaklyHypometh 7.8020e-01 3.3384e-02 weaklyHypometh 1.0000e+00 2.4371e-01 insignificant -0.0880306 8.8592e-03 lowCoverage 0.11505479 lowCoverage chr22 20119296 20120296 56384 HIC2 ENSG00000169635 0.8292117 134 7 0.828753 464 7 0.728975 137 7 0.9178744 142 7 0.8947644 113 5 0.952704 218 7 0.886595 128 7 0.8949231 111 5 0.8696673 86 5 0.8605442 67 4 0.863762 332 7 0.842857 33 4 0.8248499 89 4 0.925940 83 4 0.923160 134 4 0.8183673 41 4 1.0000000 1 0 0.8095935 101 7 0.892215 183 7 0.827154 165 7 0.917685 75 7 0.7216667 42 4 0.845992 97 7 0.826007 57 6 0.7850688 97 7 0.9092814 274 7 0.877196 111 6 0.8149720 99 7 0.856949 245 7 0.9268075 438 7 0.931828 332 7 0.915831 201 7 0.4117590 257 7 0.2208791 65 5 0.5382673 76 3 0.6406926 43 3 0.2349044 260 7 0.4890294 310 7 0.807937 84 7 0.7488226 112 7 0.7982426 98 7 0.9642857 24 0 0.805322 86 7 0.8326348 0.841150 0.715247 0.9073583 0.8746350 0.9448876 0.8804335 0.8791042 0.8273780 0.8772358 0.869467 0.802896 0.8141781 0.900401 0.9307465 0.7644599 NA 0.7974219 0.8995248 0.803001 0.886127 0.72315247 0.8187015 0.7915885 0.74159282 0.9094373 0.8809183 0.8005800 0.875690 0.920005 0.9228401 0.892294 0.3690891 0.3138368 0.5872687 0.6566888 0.2320159 0.4574518 0.7988482 0.7212990 0.7632574 0.9847561 0.8413638 4 0.855539 0.875725 -2.2574e-02 7 0.861788 0.887789 -0.0260017 0.99407251 3.6908e-02 weaklyHypometh 1.00000 6.7106e-01 insignificant 0.7052221 0.46234327 insignificant 1 1.00000 insignificant 0.00882180 0.7066657 insignificant 1.00000 insignificant 0.855539 0.3590504 0.49967545 7 0.861788 0.373820 0.48796740 2.4314e-56 1.0000e+00 hypermethylated 4.0523e-54 1.0000e+00 hypermethylated 2.0429e-14 1.0000e+00 hypermethylated 2.9184e-12 1.0000e+00 hypermethylated 4.4701e-01 1.0503e-03 weaklyHypermeth 1.4793e-02 weaklyHypermeth 0.855539 0.8168317 0.05947821 7 0.861788 0.799908 0.06187970 1.7657e-03 9.6089e-01 weaklyHypermeth 2.7589e-02 1.0000e+00 weaklyHypermeth 1.2173e-01 8.8438e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.4674e-02 3.0095e-01 insignificant 1.0000e+00 insignificant 0.875725 0.3590504 0.52369531 7 0.887789 0.373820 0.51396913 2.6715e-42 1.0000e+00 hypermethylated 4.4524e-40 1.0000e+00 hypermethylated 5.9263e-12 1.0000e+00 hypermethylated 7.4078e-10 1.0000e+00 hypermethylated 4.3819e-01 9.7820e-04 hypermethylated 1.4821e-02 hypermethylated 0.875725 0.8168317 0.08464688 7 0.887789 0.799908 0.08788143 2.7016e-05 9.9773e-01 weaklyHypermeth 8.7121e-04 1.0000e+00 weaklyHypermeth 3.7872e-02 8.2953e-01 weaklyHypermeth 4.7409e-01 1.0000e+00 insignificant 0.03585174 4.1473e-01 insignificant 1.0000e+00 insignificant 0.3590504 0.8168317 -0.42565886 7 0.373820 0.799908 -0.4260877 1.0000e+00 1.6629e-16 hypomethylated 1.0000e+00 1.1190e-14 hypomethylated 1.0000e+00 6.4027e-09 hypomethylated 1.0000e+00 1.0671e-06 hypomethylated -0.4023333 1.0487e-03 weaklyHypometh 0.02231186 weaklyHypometh chr22 20119996 20120996 56385 HIC2 ENSG00000169635 0.8531161 226 9 0.738708 650 9 0.713312 217 9 0.9285336 247 9 0.7822771 175 7 0.936550 401 9 0.819739 199 9 0.8817656 201 7 0.8634449 129 7 0.7786559 120 6 0.869319 444 9 0.828261 67 6 0.8115500 151 6 0.913981 124 6 0.921717 177 6 0.7658692 73 6 1.0000000 4 0 0.7768470 250 9 0.897818 302 9 0.830912 263 9 0.895015 113 9 0.7142857 71 6 0.830216 155 9 0.779872 88 8 0.8120905 174 8 0.8977662 394 9 0.858790 223 8 0.8442013 153 9 0.859025 414 9 0.9026897 628 9 0.936825 467 9 0.873997 323 9 0.3641424 385 9 0.1584615 95 6 0.3747179 174 5 0.4983165 73 4 0.1965923 390 9 0.4470228 424 9 0.840516 147 9 0.7635245 216 9 0.8165740 211 8 0.9240295 109 1 0.666033 158 9 0.8580358 0.811413 0.684017 0.8932219 0.8475367 0.9050354 0.8465373 0.8718125 0.8017329 0.8693989 0.860906 0.783951 0.7969709 0.871848 0.8950632 0.6904675 NA 0.7048420 0.8787261 0.834821 0.839373 0.74430576 0.7899571 0.8085668 0.78426453 0.8814397 0.7461168 0.8206445 0.847110 0.913247 0.8956663 0.898492 0.2093188 0.1859654 0.3264827 0.3566125 0.1413927 0.2802056 0.8540404 0.7225667 0.7750771 0.8165044 0.6946988 5 0.834163 0.860131 -2.6061e-02 9 0.824894 0.866546 -0.0416517 0.99942057 7.2665e-03 weaklyHypometh 1.00000 3.3136e-01 insignificant 0.8722637 0.41441024 insignificant 1 1.00000 insignificant -0.00477887 0.8447541 insignificant 1.00000 insignificant 0.834163 0.2504867 0.59806156 9 0.824894 0.309937 0.51495691 2.1863e-78 1.0000e+00 hypermethylated 1.0932e-75 1.0000e+00 hypermethylated 4.2653e-19 1.0000e+00 hypermethylated 1.0663e-16 1.0000e+00 hypermethylated 5.0574e-01 1.3087e-04 hypermethylated 2.7845e-03 hypermethylated 0.834163 0.7574316 0.07753038 9 0.824894 0.717335 0.10755895 5.6718e-04 9.6808e-01 weaklyHypermeth 1.1121e-02 1.0000e+00 weaklyHypermeth 8.2793e-02 8.9556e-01 insignificant 9.0981e-01 1.0000e+00 insignificant 4.3483e-02 3.8457e-01 insignificant 1.0000e+00 insignificant 0.860131 0.2504867 0.61962494 9 0.866546 0.309937 0.55660860 1.3822e-60 1.0000e+00 hypermethylated 6.9109e-58 1.0000e+00 hypermethylated 2.7478e-16 1.0000e+00 hypermethylated 6.8694e-14 1.0000e+00 hypermethylated 5.1052e-01 1.1684e-04 hypermethylated 2.9209e-03 hypermethylated 0.860131 0.7574316 0.10361700 9 0.866546 0.717335 0.14921063 2.0253e-06 9.9988e-01 weaklyHypermeth 9.2060e-05 1.0000e+00 weaklyHypermeth 2.1943e-02 8.6473e-01 weaklyHypermeth 3.4830e-01 1.0000e+00 insignificant 0.04826223 3.4072e-01 insignificant 1.0000e+00 insignificant 0.2504867 0.7574316 -0.55199547 9 0.309937 0.717335 -0.4073980 1.0000e+00 1.4959e-23 hypomethylated 1.0000e+00 2.9918e-21 hypomethylated 1.0000e+00 1.2688e-10 hypomethylated 1.0000e+00 3.1721e-08 hypomethylated -0.4622599 1.0742e-04 hypomethylated 0.00537087 hypomethylated chr22 20176196 20177196 56391 PI4KAP2 ENSG00000183506 0.7101399 77 4 0.400668 215 10 0.647911 174 11 0.5133516 83 7 0.4656597 172 11 0.546114 221 11 0.691792 137 10 0.2961039 136 10 0.3525760 113 10 0.5369067 149 10 0.555105 198 10 0.553410 127 8 0.3286824 72 7 0.524531 42 4 0.362872 127 10 0.5068182 56 5 0.4333333 17 0 0.4724873 92 3 0.483026 147 5 0.486348 138 8 0.611708 82 8 0.4019284 91 9 0.429184 164 9 0.428581 71 9 0.5545455 33 2 0.4405171 129 7 0.469222 273 10 0.4512401 188 11 0.471154 269 7 0.5106075 254 11 0.590027 113 6 0.616264 150 11 0.4926354 143 10 0.4969462 135 6 0.6983244 209 8 0.3370370 32 3 0.6400585 99 9 0.2610475 180 8 0.358485 109 5 0.3508772 171 9 0.2403509 57 2 0.4820346 88 2 0.504545 63 2 0.7544355 0.405635 0.660547 0.5138613 0.4755707 0.6119209 0.7084633 0.3492704 0.3760768 0.5747621 0.598144 0.558442 0.3304531 0.589158 0.4183157 0.4949597 0.5037239 0.5035762 0.4819989 0.548554 0.635203 0.46063050 0.4785335 0.4345325 0.57177419 0.4691105 0.4901136 0.5241791 0.479623 0.528946 0.5984538 0.643199 0.4988221 0.4907061 0.7301645 0.4157939 0.7095359 0.2799544 0.4472536 0.4101019 0.3007039 0.4497120 0.5939516 0 0.607300 0.601653 2.5154e-03 10 0.499924 0.481845 0.0180791 0.42609645 6.6184e-01 insignificant 1.00000 1.0000e+00 insignificant 0.8942033 0.34024816 insignificant 1 1.00000 insignificant -0.00452309 0.8934872 insignificant 1.00000 insignificant 0.607300 0.6286073 0.00918204 8 0.499924 0.516868 -0.01694470 3.3011e-02 4.4995e-02 weaklyHypermeth 1.6757e-01 9.2600e-01 insignificant 2.0586e-01 2.7410e-01 insignificant 9.7105e-01 1.0000e+00 insignificant 5.7170e-03 9.4013e-01 insignificant 1.0000e+00 insignificant 0.607300 0.6694045 0.05935191 3 0.499924 0.389975 0.10994874 1.4855e-03 9.9802e-01 lowCoverage 2.3960e-02 1.0000e+00 lowCoverage 5.6613e-03 9.9876e-01 lowCoverage 1.0484e-01 1.0000e+00 lowCoverage 1.0613e-01 9.5945e-02 lowCoverage 7.7355e-01 lowCoverage 0.600991 0.6278195 0.01151198 8 0.441691 0.473796 -0.03210512 4.4225e-02 4.5123e-02 weaklyHypermeth 2.1161e-01 1.0000e+00 insignificant 2.2561e-01 5.3249e-01 insignificant 9.7666e-01 1.0000e+00 insignificant 1.0240e-02 8.9183e-01 insignificant 1.0000e+00 insignificant 0.600991 0.6680328 0.06487797 3 0.441691 0.357477 0.08421386 1.9876e-04 9.9803e-01 lowCoverage 4.6224e-03 1.0000e+00 lowCoverage 1.7252e-03 9.9959e-01 lowCoverage 4.6628e-02 1.0000e+00 lowCoverage 0.11065621 8.3867e-02 lowCoverage 8.8230e-01 lowCoverage 0.6278195 0.6680328 -0.01050776 3 0.473796 0.357477 0.1163190 4.6477e-02 7.4698e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 1.8815e-01 8.1648e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.1004161 2.6382e-01 lowCoverage 1.00000000 lowCoverage chr22 20182396 20183396 56394 PI4KAP2 ENSG00000183506 0.8700166 240 9 0.803133 673 9 0.565173 240 9 0.9411755 283 9 0.8935662 166 9 0.837578 378 9 0.925440 216 9 0.8798594 190 9 0.8226428 160 7 0.8657801 122 9 0.909539 401 9 0.836144 68 6 0.8633182 151 6 0.883436 103 6 0.909398 154 6 0.9232804 76 5 0.4444444 13 0 0.8043048 271 8 0.897359 258 9 0.862424 268 9 0.854199 87 7 0.6865373 53 3 0.882756 178 9 0.856245 96 7 0.7409275 177 9 0.8929826 462 9 0.757867 202 7 0.9239678 181 7 0.802552 437 9 0.9258901 635 9 0.925127 479 9 0.886206 268 9 0.3364899 446 9 0.1876543 65 6 0.4192934 169 7 0.4819444 80 6 0.2828423 387 9 0.5671621 431 9 0.818298 152 9 0.7609398 222 8 0.8359732 187 8 0.7695893 140 8 0.758486 126 6 0.8277743 0.809208 0.626388 0.9078463 0.8722023 0.8580458 0.8609660 0.8259605 0.7875719 0.8299462 0.912064 0.769177 0.7304786 0.809454 0.8845605 0.8435308 0.7526620 0.7260365 0.8786540 0.847675 0.869330 0.64317501 0.8268941 0.8444115 0.72516666 0.8758382 0.7236807 0.9013254 0.889789 0.904075 0.8944799 0.864030 0.2133945 0.1622308 0.3105520 0.2427066 0.1247984 0.3257305 0.8062677 0.7397570 0.8183150 0.7412030 0.7039722 3 0.830512 0.868817 -3.8529e-02 9 0.834321 0.881812 -0.0474911 0.99743531 1.1033e-02 weaklyHypometh 1.00000 4.0864e-01 insignificant 0.8986553 0.24687890 insignificant 1 1.00000 insignificant -0.00770410 0.8304175 insignificant 1.00000 insignificant 0.830512 0.2896071 0.55917867 9 0.834321 0.368932 0.46538875 2.5307e-59 1.0000e+00 hypermethylated 6.3268e-57 1.0000e+00 hypermethylated 1.5459e-17 1.0000e+00 hypermethylated 3.0511e-15 1.0000e+00 hypermethylated 4.5767e-01 1.1509e-04 hypermethylated 2.5159e-03 hypermethylated 0.831142 0.7871826 0.04689028 9 0.850999 0.800219 0.05078086 2.0809e-03 9.8011e-01 weaklyHypermeth 3.1752e-02 1.0000e+00 weaklyHypermeth 1.1547e-03 9.9899e-01 weaklyHypermeth 2.8163e-02 1.0000e+00 weaklyHypermeth 4.8244e-02 1.4100e-01 insignificant 9.4631e-01 insignificant 0.868817 0.2896071 0.59172801 9 0.881812 0.368932 0.51287983 2.6791e-47 1.0000e+00 hypermethylated 6.6979e-45 1.0000e+00 hypermethylated 6.9112e-14 1.0000e+00 hypermethylated 1.1519e-11 1.0000e+00 hypermethylated 4.6537e-01 1.4906e-04 hypermethylated 3.4866e-03 hypermethylated 0.868802 0.7871826 0.08807322 9 0.882568 0.800219 0.08234990 3.5455e-07 9.9626e-01 weaklyHypermeth 1.9697e-05 1.0000e+00 weaklyHypermeth 1.2712e-04 9.9743e-01 weaklyHypermeth 6.3559e-03 1.0000e+00 weaklyHypermeth 0.05594761 6.5358e-02 insignificant 7.8811e-01 insignificant 0.2895238 0.7871826 -0.53940036 9 0.372887 0.800219 -0.4273314 1.0000e+00 1.9304e-21 hypomethylated 1.0000e+00 1.9304e-19 hypomethylated 1.0000e+00 1.4797e-08 hypomethylated 1.0000e+00 1.6787e-06 hypomethylated -0.4094261 4.9690e-04 hypomethylated 0.01381045 hypomethylated chr22 20197196 20198196 56397 PI4KAP2 ENSG00000183506 0.8769947 149 3 0.812317 73 3 0.675000 96 3 0.6978654 90 3 0.8571429 48 3 0.871525 82 6 0.874122 144 3 0.7106227 34 3 0.9308807 59 3 0.7685185 66 3 0.741602 104 3 0.818298 101 3 0.7356838 62 3 NA 0 0 0.873737 84 3 0.8160535 118 3 0.7861111 76 3 0.8270870 228 3 0.833287 103 6 0.891667 81 3 0.904274 35 3 0.0000000 1 0 0.806337 57 6 0.690476 18 3 1.0000000 2 0 0.7981336 85 6 0.709402 31 3 0.7889929 44 3 0.804468 50 3 0.8703704 59 6 0.782804 61 5 0.884259 68 5 0.8796296 23 2 0.8218954 46 3 0.8777778 104 5 0.9088636 180 3 0.9047619 40 3 0.8455643 84 6 0.712010 59 3 0.8373422 149 6 0.7829457 129 3 0.6785714 22 3 0.890316 70 3 1.0000000 0.808965 0.717857 0.2857143 0.8299320 0.9438776 0.9143063 0.7880691 0.9455327 0.7579365 0.716501 0.836414 0.7676740 NA 0.8419913 0.8590540 0.8321429 0.9523810 0.8244498 0.964286 0.871062 0.73129452 0.7546382 0.6224490 0.95433895 0.8242244 0.8119658 0.8381398 0.789217 0.952381 0.8278912 0.964286 0.8849206 0.8564426 0.9588435 0.9540816 0.9591837 0.8285714 0.6785714 0.9020408 NA 0.7785714 1.0000000 0 0.814238 0.810176 -1.5353e-03 3 0.797682 0.803038 -0.0053566 0.64610918 6.3965e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.6485504 0.82727556 lowCoverage 1 1.00000 lowCoverage 0.05715508 0.4579468 lowCoverage 1.00000 lowCoverage 0.814238 0.8825996 -0.07999162 5 0.797682 0.865943 -0.06826144 9.7860e-01 1.3657e-04 weaklyHypometh 1.0000e+00 7.5873e-03 weaklyHypometh 9.9208e-01 3.6091e-02 weaklyHypometh 1.0000e+00 9.7543e-01 insignificant -6.2634e-02 9.1800e-03 lowCoverage 9.1800e-02 lowCoverage 0.814238 0.8088578 -0.01779749 3 0.797682 0.802076 -0.00439395 6.3148e-01 1.6500e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.8862e-01 3.4873e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 3.0211e-02 5.0458e-01 lowCoverage 1.0000e+00 lowCoverage 0.810176 0.8825996 -0.07996038 2 0.803038 0.865943 -0.06290487 9.8788e-01 2.9879e-03 lowCoverage 1.0000e+00 1.4228e-01 lowCoverage 9.9286e-01 9.9316e-02 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -1.1979e-01 1.3190e-01 lowCoverage 7.3278e-01 lowCoverage 0.810176 0.8088578 -0.01229791 0 0.803038 0.802076 0.00096262 7.5848e-01 2.5099e-01 noCoverage 1.0000e+00 1.0000e+00 noCoverage 7.3891e-01 4.8824e-01 noCoverage 1.0000e+00 1.0000e+00 noCoverage -0.02694397 7.4846e-01 lowCoverage 1.0000e+00 lowCoverage 0.8825996 0.8088578 0.05698818 3 0.865943 0.802076 0.0638675 9.2114e-02 9.9570e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 2.3378e-01 9.9533e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.0928450 7.4648e-02 lowCoverage 0.51481401 lowCoverage chr22 20228496 20229496 56399 ENSG00000212286,ENSG00000212491 0.6230159 47 5 0.507878 141 6 0.446429 42 4 0.7697069 87 6 0.5304816 46 4 0.654219 132 6 0.509259 41 4 0.6022269 97 6 0.5535714 48 4 0.5426471 35 2 0.753778 187 6 0.511905 26 2 0.5946429 46 4 0.683333 27 3 0.558571 45 4 0.2285714 16 1 0.5192308 18 1 0.6292353 60 5 0.676467 59 4 0.597863 128 2 0.622559 50 4 0.5144444 45 2 0.603175 36 4 0.491319 64 2 0.8055556 35 4 0.6880504 118 4 0.435457 79 2 0.3779254 69 2 0.779762 50 3 0.6849626 151 6 0.706211 176 6 0.606086 121 6 0.6885580 78 6 0.7336182 58 6 0.3665577 112 6 0.2604167 15 1 0.6612961 78 6 0.6263889 77 6 0.604365 82 6 0.6694444 58 5 0.6190837 63 6 0.6289683 20 1 0.612386 67 5 0.7333805 0.589695 0.507779 0.8049570 0.3950943 0.5883508 0.3311331 0.6609129 0.5074257 0.4909413 0.727963 0.188119 0.4621641 0.563696 0.5371994 0.1782178 0.2825725 0.6976027 0.5752966 0.507849 0.432743 0.45003300 0.4809995 0.2714521 0.81848185 0.6924177 0.3117560 0.1863528 0.760726 0.665857 0.6702411 0.493599 0.6429436 0.7535330 0.4526629 0.3138614 0.4814760 0.6044554 0.5775106 0.6785479 0.6606875 0.6402640 0.5084290 1 0.588191 0.542254 1.8538e-02 4 0.618593 0.622605 -0.0040119 0.42012637 6.3319e-02 lowCoverage 1.00000 8.6997e-01 lowCoverage 0.6200828 0.21098987 lowCoverage 1 1.00000 lowCoverage -0.03497385 0.4612185 lowCoverage 1.00000 lowCoverage 0.588191 0.5707434 0.02755196 6 0.618593 0.565068 0.05352480 1.2551e-01 9.6635e-01 insignificant 5.1652e-01 1.0000e+00 insignificant 4.3867e-01 8.6194e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.8512e-02 8.3169e-01 lowCoverage 1.0000e+00 lowCoverage 0.588191 0.6448276 -0.03489396 6 0.618593 0.630500 -0.01190689 5.9334e-01 2.8149e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.1350e-01 3.5728e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -5.2198e-02 8.0910e-02 lowCoverage 7.0356e-01 lowCoverage 0.542254 0.5707434 0.01050831 4 0.622605 0.565068 0.05753670 4.5334e-02 8.9602e-01 lowCoverage 2.1486e-01 1.0000e+00 lowCoverage 8.3919e-02 8.5577e-01 lowCoverage 4.5362e-01 1.0000e+00 lowCoverage 5.3486e-02 5.6187e-01 lowCoverage 1.0000e+00 lowCoverage 0.542254 0.6448276 -0.04431766 4 0.622605 0.630500 -0.00789498 2.9193e-01 5.8230e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 2.8112e-01 6.2156e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.01722392 6.7518e-01 lowCoverage 1.0000e+00 lowCoverage 0.5707434 0.6448276 -0.06677570 6 0.565068 0.630500 -0.0654317 8.7733e-01 1.1315e-01 insignificant 1.0000e+00 5.4401e-01 insignificant 9.4087e-01 2.8932e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0707102 4.1606e-01 lowCoverage 1.00000000 lowCoverage chr22 20273296 20274296 56404 UBE2L3 ENSG00000185651 0.7766227 108 5 0.709231 126 5 0.609091 46 5 0.8069350 117 5 0.6472222 37 5 0.717724 167 5 0.678571 38 5 0.7283684 108 5 0.6955556 34 5 0.5652778 48 5 0.700583 135 5 0.660000 17 1 0.7723039 70 5 0.625397 41 5 0.826667 28 2 0.9333333 14 2 0.2857143 7 0 0.8146568 94 5 0.714394 90 5 0.497329 117 5 0.575893 39 5 0.7409524 44 5 0.767949 65 5 0.580782 43 5 0.6733333 30 5 0.7941656 142 5 0.576923 44 5 0.6507937 23 2 0.758272 82 5 0.7584670 102 5 0.755153 112 5 0.800896 186 5 0.5816883 107 5 0.5966667 57 5 0.6616541 73 5 0.7500000 9 0 0.6772106 51 5 0.6518207 118 5 0.805195 76 5 0.8280567 85 5 0.7244818 80 5 0.7423469 40 5 0.691219 104 5 0.7484973 0.600200 0.644704 0.7393889 0.6534149 0.7316274 0.7522936 0.7347658 0.7333333 0.7241590 0.706484 0.684404 0.7936904 0.665939 0.8470948 0.9082569 0.2464917 0.7684241 0.7514595 0.715454 0.942333 0.74442988 0.7647612 0.7771953 0.73730887 0.7089428 0.6073865 0.7308869 0.780144 0.737674 0.7609787 0.735806 0.6011557 0.5927625 0.6942126 0.7128560 0.6831134 0.6811348 0.7475396 0.8437043 0.7325572 0.6779161 0.7038449 2 0.712205 0.740132 -2.8062e-02 5 0.642237 0.632261 0.0099764 0.88405902 1.0275e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9548331 0.31165752 insignificant 1 1.00000 insignificant -0.01454951 0.7153139 lowCoverage 1.00000 lowCoverage 0.713282 0.6409639 0.07515298 5 0.706027 0.629528 0.07649872 1.9227e-04 7.1777e-01 weaklyHypermeth 1.3636e-03 1.0000e+00 weaklyHypermeth 4.7253e-03 8.4153e-01 weaklyHypermeth 4.0928e-02 1.0000e+00 weaklyHypermeth 3.5075e-02 3.8271e-01 lowCoverage 1.0000e+00 lowCoverage 0.712205 0.7324675 -0.02711545 5 0.642237 0.850465 -0.20822778 9.8903e-01 2.6212e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9374e-01 5.2099e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -7.0011e-02 9.6693e-02 lowCoverage 7.7355e-01 lowCoverage 0.743618 0.6409639 0.10324029 5 0.738070 0.629528 0.10854129 4.2430e-05 9.9857e-01 weaklyHypermeth 3.7219e-04 1.0000e+00 weaklyHypermeth 1.7902e-03 9.9770e-01 weaklyHypermeth 1.8083e-02 1.0000e+00 weaklyHypermeth 4.9625e-02 1.8071e-01 lowCoverage 9.1267e-01 lowCoverage 0.740132 0.7324675 -0.00106312 5 0.632261 0.850465 -0.21820413 8.8496e-01 4.6057e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.0550e-01 6.2789e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.05546152 1.4757e-01 lowCoverage 1.0000e+00 lowCoverage 0.6409639 0.7296588 -0.10079140 5 0.629528 0.730837 -0.1013087 9.9563e-01 3.4318e-04 weaklyHypometh 1.0000e+00 3.7712e-03 weaklyHypometh 9.9904e-01 6.6729e-03 weaklyHypometh 1.0000e+00 6.8326e-02 weaklyHypometh -0.1050865 1.6264e-02 lowCoverage 0.18071422 lowCoverage chr22 20284096 20285096 56405 UBE2L3 ENSG00000185651 0.8672220 370 12 0.749025 414 13 0.764193 213 9 0.7845197 343 12 0.8021668 133 12 0.814175 450 13 0.821215 178 11 0.6959413 203 12 0.7316717 192 12 0.8397462 169 11 0.831601 614 13 0.648775 144 5 0.8593134 199 12 0.743056 66 7 0.759633 232 12 0.8594017 93 6 0.6293463 110 6 0.7872519 357 12 0.848193 271 12 0.790680 387 13 0.770279 142 8 0.7858367 138 12 0.760707 285 13 0.882803 139 12 0.7952867 207 10 0.7921860 352 12 0.820665 209 14 0.7866300 88 9 0.888889 153 9 0.8201679 268 13 0.845795 347 13 0.842529 587 15 0.7779624 230 12 0.7678676 195 12 0.6008015 281 13 0.8528139 112 6 0.7616478 196 12 0.7712780 366 15 0.887090 336 12 0.8007667 536 12 0.7830589 387 12 0.8699130 382 11 0.871662 409 14 0.8753611 0.782549 0.800852 0.8837014 0.8365190 0.8467560 0.8543287 0.8692658 0.8083028 0.8760806 0.836002 0.758827 0.8746961 0.830810 0.8374359 0.8485230 0.7416632 0.9009588 0.9141786 0.872526 0.876604 0.90276645 0.8176237 0.8823333 0.80961678 0.8494409 0.8327028 0.8797788 0.938948 0.906964 0.8722533 0.865740 0.8350386 0.7996382 0.8290735 0.8788149 0.8264651 0.8346005 0.9011997 0.8982374 0.8700968 0.8995569 0.9092882 6 0.832425 0.851801 -1.7646e-02 12 0.786436 0.813780 -0.0273438 0.93095334 5.6995e-03 weaklyHypometh 1.00000 3.1664e-01 insignificant 0.9955929 0.00225912 weaklyHypometh 1 0.34831 insignificant -0.03462489 0.0839286 insignificant 1.00000 insignificant 0.832425 0.7746377 0.03431864 12 0.786436 0.711479 0.07495760 1.1505e-03 9.1402e-01 weaklyHypermeth 7.1908e-03 1.0000e+00 weaklyHypermeth 1.2945e-01 7.0060e-01 insignificant 6.7424e-01 1.0000e+00 insignificant 2.5961e-02 5.0585e-01 insignificant 1.0000e+00 insignificant 0.832425 0.8770732 -0.04815778 12 0.786436 0.772238 0.01419858 9.8943e-01 1.7448e-03 weaklyHypometh 1.0000e+00 6.2314e-02 weaklyHypometh 9.9930e-01 6.6225e-05 weaklyHypometh 1.0000e+00 8.2782e-03 weaklyHypometh -6.1142e-02 4.3600e-02 weaklyHypometh 4.7888e-01 insignificant 0.851801 0.7746377 0.05689432 12 0.813780 0.711479 0.10230141 2.6261e-07 9.9911e-01 weaklyHypermeth 2.9842e-06 1.0000e+00 weaklyHypermeth 4.5228e-03 9.9600e-01 weaklyHypermeth 4.0886e-02 1.0000e+00 weaklyHypermeth 6.0586e-02 1.4030e-01 insignificant 7.7514e-01 insignificant 0.851801 0.8770732 -0.02810017 12 0.813780 0.772238 0.04154238 7.6688e-01 7.7169e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4988e-01 1.5543e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02651704 3.1195e-01 insignificant 1.0000e+00 insignificant 0.7746377 0.8770732 -0.08580518 12 0.711479 0.772238 -0.0607590 9.9992e-01 5.7680e-08 weaklyHypometh 1.0000e+00 1.4420e-06 weaklyHypometh 9.9996e-01 1.4082e-04 weaklyHypometh 1.0000e+00 3.8060e-03 weaklyHypometh -0.0871031 5.9901e-02 insignificant 0.44371373 insignificant chr22 20510696 20511696 56417 ENSG00000200985 0.5927475 153 9 0.588659 119 7 0.552116 59 5 0.7198286 125 7 0.6445455 53 3 0.704071 148 8 0.709079 57 7 0.6224691 116 8 0.7363952 65 6 0.6574074 57 5 0.678392 172 7 0.851852 37 3 0.6526455 103 6 0.776167 83 9 0.682744 72 9 0.4444444 23 3 0.5500000 20 0 0.7290123 135 7 0.678571 60 7 0.676473 99 6 0.633333 23 1 0.9777778 23 1 0.666458 94 7 0.590556 50 5 0.8000000 38 5 0.5692815 95 5 0.703957 44 4 0.8571429 20 1 0.714478 81 4 0.6286917 135 7 0.639087 80 5 0.707421 127 7 0.6092593 99 7 0.5500364 84 7 0.6635802 145 9 0.6666667 7 0 0.5532977 78 7 0.5323505 93 6 0.746834 117 7 0.7547703 138 7 0.7653801 93 6 0.5458333 45 3 0.706957 110 7 0.7883320 0.723825 0.658150 0.8283545 0.6326923 0.7699869 0.7731051 0.7857265 0.8944517 0.7762821 0.771858 1.000000 0.8206044 0.935897 0.8269231 0.5192308 0.5812436 0.8510684 0.7706044 0.729353 0.887821 0.94126984 0.7633958 0.7270299 0.86153846 0.7670807 0.8037869 0.9595291 0.829837 0.787879 0.8743230 0.771460 0.7348443 0.6175011 0.8127137 0.8076923 0.7166804 0.7754835 0.8403212 0.8303868 0.8059703 0.6339744 0.8311244 0 0.741438 0.782716 -2.4401e-02 7 0.692937 0.658566 0.0343705 0.77087674 2.4161e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9049357 0.19675597 insignificant 1 1.00000 insignificant -0.04496756 0.2713258 lowCoverage 1.00000 lowCoverage 0.741143 0.6936759 0.03953558 9 0.658819 0.614978 0.04384048 9.3239e-03 8.3509e-01 weaklyHypermeth 5.1800e-02 1.0000e+00 weaklyHypermeth 2.0491e-02 8.8462e-01 weaklyHypermeth 1.4132e-01 1.0000e+00 insignificant 6.6516e-02 5.5180e-02 insignificant 3.8319e-01 insignificant 0.741143 0.7892644 -0.02230217 7 0.658819 0.685733 -0.02691426 9.2590e-01 3.2857e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.1355e-01 6.0076e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -4.1574e-02 3.9450e-01 insignificant 1.0000e+00 insignificant 0.783416 0.6936759 0.06165341 7 0.676185 0.614978 0.06120653 3.3776e-03 8.9921e-01 weaklyHypermeth 2.0979e-02 1.0000e+00 weaklyHypermeth 2.3123e-02 9.9132e-01 weaklyHypermeth 1.4918e-01 1.0000e+00 insignificant 1.1148e-01 1.7350e-02 lowCoverage 1.5917e-01 lowCoverage 0.783416 0.7892644 0.00345724 7 0.676185 0.685733 -0.00954820 6.9929e-01 7.9010e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.4569e-01 9.6825e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00339364 9.5044e-01 lowCoverage 1.0000e+00 lowCoverage 0.6936759 0.7892644 -0.06927449 7 0.614978 0.685733 -0.0707547 9.1515e-01 2.0596e-02 weaklyHypometh 1.0000e+00 1.3462e-01 insignificant 8.4331e-01 1.9370e-01 insignificant 1.0000e+00 9.8324e-01 insignificant -0.1080898 5.8570e-02 insignificant 0.43869657 insignificant chr22 20621296 20622296 56425 ENSG00000217337 0.6798908 189 5 0.679733 185 5 0.807881 247 5 0.8561025 235 5 0.8690476 114 5 0.884398 288 5 0.612563 236 5 0.6668492 157 5 0.7512423 160 5 0.7007937 152 5 0.868294 322 5 0.672489 160 5 0.6986532 175 5 0.888000 155 5 0.837339 264 5 0.6872054 165 5 NA 0 0 0.7487799 251 5 0.915348 368 5 0.931681 238 5 0.749070 124 5 0.7363636 77 5 0.916043 188 5 0.592990 113 5 0.8950000 59 5 0.6965585 261 5 0.763981 232 5 0.6845410 90 5 0.864981 393 5 0.8346809 219 5 0.848396 302 5 0.884756 266 5 0.0043290 327 5 0.0000000 208 5 0.0000000 94 3 0.3571429 24 3 0.0073748 313 5 0.3194881 367 5 0.698422 191 5 0.8341367 167 5 0.8608366 214 5 0.7866460 216 5 0.633946 173 5 0.8025045 0.801624 0.788089 0.8620526 0.8819392 0.8792127 0.8504375 0.7786581 0.8797680 0.9109639 0.825260 0.817977 0.8246708 0.877067 0.8119860 0.8036218 NA 0.7068566 0.8880414 0.914275 0.911136 0.72870391 0.9048279 0.8160160 0.91457831 0.8189189 0.7016074 0.7228019 0.842539 0.806925 0.7801956 0.872959 0.0031294 0.0000000 0.0000000 0.2468158 0.0071075 0.1887293 0.8214940 0.7583743 0.8534670 0.7645214 0.7343756 5 0.842403 0.839931 1.2411e-02 5 0.692363 0.595906 0.0964573 0.42540235 1.0024e-01 insignificant 1.00000 1.0000e+00 insignificant 0.3458825 0.20337047 insignificant 1 1.00000 insignificant -0.01229991 0.7435122 lowCoverage 1.00000 lowCoverage 0.843365 0.0885221 0.76439389 5 0.750456 0.067991 0.68246531 2.1783e-54 1.0000e+00 hypermethylated 3.1119e-52 1.0000e+00 hypermethylated 4.9111e-10 1.0000e+00 hypermethylated 2.3386e-08 1.0000e+00 hypermethylated 6.6192e-01 1.0253e-04 lowCoverage 2.3303e-03 lowCoverage 0.843326 0.8033299 0.03901186 5 0.708866 0.733824 -0.02495857 1.5019e-01 6.1201e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.3106e-01 7.4104e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.3849e-02 7.8347e-01 lowCoverage 1.0000e+00 lowCoverage 0.841017 0.0885221 0.74166283 5 0.681036 0.067991 0.61304477 1.9654e-38 1.0000e+00 hypermethylated 1.9654e-36 1.0000e+00 hypermethylated 2.8859e-09 1.0000e+00 hypermethylated 1.5189e-07 1.0000e+00 hypermethylated 6.7422e-01 6.2269e-05 lowCoverage 1.9734e-03 lowCoverage 0.841379 0.8033299 0.02564032 5 0.794542 0.733824 0.06071747 9.1137e-02 8.8039e-01 insignificant 7.4702e-01 1.0000e+00 insignificant 1.3141e-01 9.3306e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02614927 6.2461e-01 insignificant 1.0000e+00 insignificant 0.0885886 0.8033299 -0.72570220 5 0.079323 0.733824 -0.6545014 1.0000e+00 1.4191e-24 hypomethylated 1.0000e+00 4.7303e-22 hypomethylated 1.0000e+00 2.2827e-06 hypomethylated 1.0000e+00 1.1413e-04 hypomethylated -0.6480751 5.2050e-05 lowCoverage 0.00317972 lowCoverage chr22 21857096 21858096 56446 BCR ENSG00000186716 0.8137443 72 5 0.760470 78 5 0.537698 49 5 0.8207407 93 5 0.7030303 37 5 0.706750 154 5 0.721818 30 2 0.7109834 99 5 0.7916667 58 5 0.8131868 47 5 0.781710 139 5 0.737778 33 5 0.8833333 61 5 0.712500 62 5 0.709199 67 5 0.3200000 17 3 1.0000000 7 0 0.6463571 106 5 0.683061 80 5 0.748796 120 5 0.600000 11 2 0.8428571 57 5 0.734907 61 5 0.864815 32 3 0.8800000 19 3 0.7620137 103 5 0.935309 57 2 0.9333333 19 2 0.805996 74 5 0.7644682 101 5 0.803492 100 5 0.744128 160 5 0.8148352 77 5 0.7897436 78 5 0.7950292 85 5 0.5333333 20 3 0.5866667 29 2 0.7124149 94 5 0.856917 81 5 0.7581857 124 5 0.8103914 78 5 0.8285714 84 5 0.798392 87 5 0.8277568 0.734642 0.637897 0.8176312 0.6797348 0.7781700 0.7410038 0.7289677 0.8437500 0.8460394 0.748280 0.782407 0.8634259 0.729167 0.7375936 0.2500000 1.0000000 0.7909598 0.7124624 0.817700 0.856278 0.82341270 0.7149042 0.9398148 0.90625000 0.7773884 0.8973765 0.8958333 0.782931 0.782847 0.7676420 0.775045 0.8151614 0.7815705 0.8106877 0.5312500 0.6354167 0.7327222 0.8610425 0.8117200 0.8025261 0.8204365 0.8294728 1 0.769340 0.784635 -1.4722e-02 5 0.750767 0.795302 -0.0445340 0.96969541 2.8021e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9989189 0.02696064 weaklyHypometh 1 0.81699 insignificant -0.07580220 0.0718870 lowCoverage 1.00000 lowCoverage 0.772043 0.7571802 0.00859366 5 0.758767 0.751120 0.00764675 3.0579e-01 4.8853e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.8421e-01 4.4532e-01 insignificant 8.9794e-01 1.0000e+00 insignificant 2.4804e-02 6.7425e-01 lowCoverage 1.0000e+00 lowCoverage 0.769176 0.8171806 -0.04861057 5 0.709229 0.762420 -0.05319136 9.3676e-01 1.5153e-02 weaklyHypometh 1.0000e+00 3.1569e-01 insignificant 9.6647e-01 9.6941e-03 weaklyHypometh 1.0000e+00 2.7697e-01 insignificant -8.0350e-02 2.8050e-02 lowCoverage 3.7906e-01 lowCoverage 0.785441 0.7571802 0.02256553 5 0.773422 0.751120 0.02230208 1.2103e-01 7.8521e-01 insignificant 5.0638e-01 1.0000e+00 insignificant 1.5145e-02 9.8872e-01 weaklyHypermeth 1.0302e-01 1.0000e+00 insignificant 1.0061e-01 1.0748e-01 lowCoverage 6.2130e-01 lowCoverage 0.784363 0.8171806 -0.03317796 5 0.761185 0.762420 -0.00123499 8.6470e-01 1.4092e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.7923e-01 8.4799e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00454809 8.8823e-01 lowCoverage 1.0000e+00 lowCoverage 0.7571802 0.8185841 -0.06194226 5 0.751120 0.814904 -0.0637841 9.6791e-01 2.7101e-02 weaklyHypometh 1.0000e+00 1.6833e-01 insignificant 9.8838e-01 1.3988e-02 weaklyHypometh 1.0000e+00 1.2164e-01 insignificant -0.1051543 8.5444e-02 lowCoverage 0.56815788 lowCoverage chr22 21922596 21923596 56460 BCR ENSG00000186716 0.9211149 320 7 0.852599 241 7 0.847074 259 7 0.8964952 336 7 0.8115006 196 7 0.916324 398 7 0.906091 275 6 0.8775389 248 7 0.9326169 322 7 0.9408577 295 7 0.904466 321 7 0.826065 189 6 0.8236365 312 7 0.936724 179 5 0.871339 295 7 0.7964170 171 6 0.9441490 129 5 0.7100778 358 7 0.783376 229 7 0.944400 349 7 0.861851 96 4 0.9140054 188 5 0.909020 263 7 0.918756 143 7 0.9478930 93 5 0.9368337 267 7 0.907494 246 7 0.8876672 170 8 0.931155 260 7 0.9374082 271 7 0.957704 264 7 0.942181 398 7 0.9221261 223 7 0.9049792 135 7 0.8444444 87 3 0.8826531 79 5 0.9472537 206 7 0.8712936 263 7 0.931213 390 7 0.9024105 348 7 0.8926810 336 6 0.9066785 370 7 0.897308 358 7 0.9281611 0.853585 0.856230 0.9192843 0.9456285 0.9250725 0.9045064 0.8916608 0.9130841 0.9191986 0.908015 0.905493 0.9472732 0.934668 0.9073012 0.7866223 0.9439811 0.9286429 0.8861970 0.928271 0.909019 0.87454367 0.9160575 0.9398119 0.90709573 0.9339859 0.9174885 0.8870143 0.940822 0.934577 0.9461327 0.940282 0.8863847 0.8802504 0.8301820 0.8020242 0.9336331 0.8775555 0.9604439 0.9119005 0.9195668 0.9199005 0.9172394 6 0.909443 0.923656 -1.4673e-02 7 0.833442 0.927384 -0.0939419 0.98517297 3.3921e-02 weaklyHypometh 1.00000 6.4361e-01 insignificant 0.9635879 0.02681353 weaklyHypometh 1 0.81699 insignificant -0.04885419 0.0060348 weaklyHypometh 1.00000 insignificant 0.910183 0.8841893 0.02600289 7 0.903201 0.908602 -0.00540130 5.3908e-02 2.4714e-02 inconclusive 2.5549e-01 6.1784e-01 insignificant 7.1306e-01 4.0081e-03 inconclusive 1.0000e+00 1.7426e-01 insignificant -2.3315e-02 2.8180e-01 insignificant 1.0000e+00 insignificant 0.910183 0.9223085 -0.01282436 7 0.903201 0.905931 -0.00273024 7.1555e-01 1.5427e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.9925e-01 4.3140e-02 weaklyHypometh 1.0000e+00 6.6369e-01 insignificant -3.3915e-02 4.4057e-02 weaklyHypometh 4.7888e-01 insignificant 0.923572 0.8841893 0.03901421 7 0.920922 0.908602 0.01231995 8.5670e-02 2.8780e-01 insignificant 3.7575e-01 1.0000e+00 insignificant 5.4668e-01 1.8963e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.5539e-02 1.7261e-01 insignificant 8.8976e-01 insignificant 0.923572 0.9223085 0.00205228 7 0.920922 0.905931 0.01499101 9.9209e-02 4.7054e-01 insignificant 8.0658e-01 1.0000e+00 insignificant 2.2285e-01 5.2418e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01493910 1.7120e-01 insignificant 1.0000e+00 insignificant 0.8841893 0.9223085 -0.03561295 7 0.908602 0.905931 0.0026711 1.5895e-02 4.9770e-01 inconclusive 5.1274e-01 1.0000e+00 insignificant 5.0331e-02 8.0178e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0105999 5.4201e-01 insignificant 1.00000000 insignificant chr22 21952596 21953596 56464 ENSG00000218644 0.8916825 166 6 0.889990 120 6 0.859055 125 6 0.9432375 199 6 0.8825397 56 6 0.923610 298 6 0.907814 68 3 0.9319444 145 6 0.8120382 145 6 0.9243348 126 6 0.946586 176 6 0.908129 76 6 0.8976011 161 6 0.798386 115 6 0.915238 104 3 0.7543860 53 3 0.9629630 20 1 0.8507740 197 6 0.831228 81 6 0.899425 219 6 0.814744 63 6 0.8870007 135 6 0.894138 115 6 0.780952 107 6 0.9543651 64 4 0.9339918 147 6 0.685695 104 6 0.9515383 122 4 0.806102 100 6 0.9387395 142 6 0.937914 121 6 0.859491 222 6 0.8017065 133 6 0.9490741 70 6 0.9274194 109 4 1.0000000 15 1 0.7688251 145 6 0.8719282 139 6 0.929167 139 6 0.9323885 184 6 0.9635241 106 6 0.9236051 114 6 0.914624 194 6 0.8901213 0.865346 0.868856 0.9392823 0.8414079 0.9405034 0.9203812 0.9169887 0.8275528 0.9357374 0.953311 0.862225 0.9030479 0.914951 0.8994617 0.8529542 0.9162641 0.8475407 0.8528045 0.916157 0.795132 0.84908687 0.9024853 0.9363929 0.92017483 0.9429685 0.7726710 0.9375813 0.809854 0.931545 0.9330601 0.875645 0.8370360 0.9380032 0.7925299 0.9019268 0.7941650 0.8829038 0.9089372 0.9192544 0.9623286 0.9150504 0.9249461 3 0.892830 0.886963 7.0489e-03 6 0.768510 0.761673 0.0068366 0.62096917 9.3214e-01 insignificant 1.00000 1.0000e+00 insignificant 0.6491226 0.94780795 insignificant 1 1.00000 insignificant 0.01615888 0.5581366 insignificant 1.00000 insignificant 0.893167 0.8428805 0.06128831 6 0.896595 0.838090 0.05850537 6.4654e-05 5.5985e-01 weaklyHypermeth 5.0119e-04 1.0000e+00 weaklyHypermeth 1.2270e-01 2.9802e-01 insignificant 6.4573e-01 1.0000e+00 insignificant 5.5888e-05 9.9888e-01 lowCoverage 1.0000e+00 lowCoverage 0.892830 0.9131615 -0.02086687 6 0.768510 0.935959 -0.16744903 9.9046e-01 1.5233e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8868e-01 1.8131e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -4.6114e-02 5.0582e-03 weaklyHypometh 1.4780e-01 insignificant 0.888194 0.8428805 0.04679345 6 0.888619 0.838090 0.05052928 7.0722e-04 3.7406e-01 weaklyHypermeth 5.2386e-03 1.0000e+00 weaklyHypermeth 1.9928e-01 1.7701e-01 insignificant 9.0996e-01 1.0000e+00 insignificant -1.6103e-02 7.2050e-01 lowCoverage 1.0000e+00 lowCoverage 0.886963 0.9131615 -0.03245800 6 0.761673 0.935959 -0.17428567 9.8931e-01 7.5119e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7151e-01 6.9752e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.06227246 2.9708e-02 weaklyHypometh 5.4014e-01 insignificant 0.8428805 0.9130435 -0.08422413 6 0.838090 0.925285 -0.0871959 9.2744e-01 5.0494e-03 weaklyHypometh 1.0000e+00 3.8545e-02 weaklyHypometh 4.8553e-01 8.3814e-02 insignificant 1.0000e+00 5.0796e-01 insignificant -0.0461695 2.6611e-01 lowCoverage 1.00000000 lowCoverage chr22 22560196 22561196 56479 ENSG00000209104 0.8092491 279 8 0.719659 121 8 0.733088 101 8 0.7773886 149 8 0.7250000 44 8 0.700880 268 8 0.763521 125 8 0.5715330 94 8 0.7552642 73 7 0.7096591 68 8 0.745348 156 8 0.668117 99 8 0.7739583 85 8 NA 0 0 0.639205 89 8 0.5946834 69 8 0.5494318 79 8 0.7247024 148 8 0.756125 109 8 0.738548 232 8 0.729167 24 0 0.7667697 77 8 0.652191 147 8 0.781250 30 2 0.6875000 60 8 0.7697573 98 8 0.845833 49 4 1.0000000 15 1 0.700380 118 8 0.6909682 147 8 0.728941 113 8 0.723733 350 8 0.4895202 95 7 0.5691106 106 8 0.7004960 158 8 0.7551282 84 8 0.8229167 46 5 0.6766949 181 8 0.786116 286 8 0.8238739 244 8 0.8381367 180 8 0.7587470 293 8 0.849906 242 8 0.8137490 0.727553 0.739368 0.7835800 0.7209302 0.7077032 0.7527367 0.6086534 0.7460301 0.7234540 0.760209 0.673873 0.7939922 NA 0.6637156 0.6178483 0.5515122 0.7377492 0.7432065 0.741952 0.720930 0.77066030 0.6650349 0.7790698 0.67797158 0.7643145 0.8382752 0.9093262 0.706744 0.701613 0.7444860 0.718966 0.5245361 0.5738391 0.6926541 0.7465116 0.8100775 0.6907752 0.7929842 0.8252986 0.8439842 0.7615522 0.8506803 3 0.728224 0.738599 -2.6079e-03 8 0.722430 0.729688 -0.0072586 0.61814371 4.2594e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9864672 0.03123073 weaklyHypometh 1 0.86752 insignificant -0.04819734 0.1407621 insignificant 1.00000 insignificant 0.728224 0.6880597 0.05915424 8 0.722430 0.667110 0.05532000 7.7204e-03 9.9936e-01 weaklyHypermeth 4.3618e-02 1.0000e+00 weaklyHypermeth 6.4290e-02 9.6051e-01 insignificant 3.8497e-01 1.0000e+00 insignificant 3.9199e-02 4.8255e-01 insignificant 1.0000e+00 insignificant 0.728224 0.7983936 -0.08166523 8 0.722430 0.806887 -0.08445743 9.9999e-01 1.5802e-04 weaklyHypometh 1.0000e+00 9.8765e-03 weaklyHypometh 1.0000e+00 1.3846e-05 weaklyHypometh 1.0000e+00 2.3077e-03 weaklyHypometh -1.0318e-01 8.3152e-04 weaklyHypometh 4.4630e-02 weaklyHypometh 0.738599 0.6880597 0.06056226 8 0.729688 0.667110 0.06257863 1.7482e-02 9.9976e-01 weaklyHypermeth 9.3485e-02 1.0000e+00 weaklyHypermeth 1.1983e-02 9.9982e-01 weaklyHypermeth 8.6837e-02 1.0000e+00 weaklyHypermeth 8.7396e-02 1.6040e-01 insignificant 8.4324e-01 insignificant 0.738599 0.7983936 -0.07683016 8 0.729688 0.806887 -0.07719880 9.9999e-01 7.3211e-04 weaklyHypometh 1.0000e+00 7.3211e-02 weaklyHypometh 9.9579e-01 2.5650e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.05498165 1.0247e-01 insignificant 9.4860e-01 insignificant 0.6880597 0.7983936 -0.13748588 8 0.667110 0.806887 -0.1397774 1.0000e+00 5.2197e-06 weaklyHypometh 1.0000e+00 8.5570e-05 weaklyHypometh 1.0000e+00 2.0423e-04 weaklyHypometh 1.0000e+00 4.9813e-03 weaklyHypometh -0.1423781 3.4526e-02 weaklyHypometh 0.30048623 insignificant chr22 23452396 23453396 56521 ENSG00000185956 0.4727273 49 5 0.295714 43 5 0.400000 39 5 0.5666667 28 4 0.5200000 26 2 0.493333 53 5 0.532738 39 5 0.4398413 88 5 0.2400000 21 1 0.5600000 26 5 0.552070 100 5 0.583333 12 0 0.4679487 59 5 0.400000 14 1 0.470513 65 5 0.3333333 14 0 0.3750000 8 0 0.5266667 24 4 0.533333 28 1 0.520000 32 5 0.000000 2 0 0.6666667 12 0 0.480000 24 4 0.480000 23 4 0.5654762 26 4 0.4410256 64 5 0.516667 44 4 0.4000000 15 1 0.460714 47 5 0.4900585 87 5 0.495455 59 5 0.366667 61 5 0.4166667 58 5 0.4236364 47 5 0.5254545 44 4 0.5000000 4 0 0.5000000 34 5 0.3806061 54 5 0.475524 51 4 0.6200000 45 5 0.6611842 79 4 0.6500000 20 4 0.500000 25 4 0.5909091 0.369643 0.500000 0.7083333 0.6500000 0.6166667 0.5491071 0.5319444 0.2500000 0.7000000 0.690087 0.583333 0.5849359 0.500000 0.5881410 0.4166667 0.3750000 0.6583333 0.6666667 0.650000 NA 0.66666667 0.6000000 0.6000000 0.56547619 0.5512821 0.6458333 0.5000000 0.575893 0.612573 0.6193182 0.458333 0.5208333 0.5295455 0.6568182 0.5000000 0.6250000 0.4757576 0.5944056 0.7250000 0.6611842 0.6500000 0.6250000 0 0.465450 0.446121 5.4547e-03 5 0.466308 0.460338 0.0059703 0.30864751 7.6209e-01 insignificant 1.00000 1.0000e+00 insignificant 0.3985573 0.40502313 insignificant 1 1.00000 insignificant 0.01726686 0.7392390 lowCoverage 1.00000 lowCoverage 0.465450 0.4605809 0.02327931 5 0.466308 0.443557 0.02275183 9.2414e-02 9.1282e-01 insignificant 3.9493e-01 1.0000e+00 insignificant 3.1631e-01 8.8797e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.4337e-03 8.4363e-01 lowCoverage 1.0000e+00 lowCoverage 0.465450 0.6272727 -0.07563597 4 0.466308 0.545374 -0.07906595 9.9714e-01 4.5181e-03 lowCoverage 1.0000e+00 1.4119e-01 lowCoverage 9.9954e-01 2.8988e-02 lowCoverage 1.0000e+00 5.3432e-01 lowCoverage -1.1718e-01 3.5296e-02 lowCoverage 4.3836e-01 lowCoverage 0.446121 0.4605809 0.01776312 5 0.460338 0.443557 0.01678154 2.7133e-01 9.5433e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.1562e-01 9.0820e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -1.0833e-02 8.3771e-01 lowCoverage 1.0000e+00 lowCoverage 0.446121 0.6272727 -0.08004937 4 0.460338 0.545374 -0.08503624 9.9957e-01 4.8238e-04 lowCoverage 1.0000e+00 6.0298e-02 lowCoverage 9.9399e-01 3.5580e-03 lowCoverage 1.0000e+00 3.2345e-01 lowCoverage -0.13444764 4.3893e-02 lowCoverage 6.4549e-01 lowCoverage 0.4605809 0.6272727 -0.10099000 4 0.443557 0.545374 -0.1018178 9.9983e-01 7.4967e-04 lowCoverage 1.0000e+00 7.5751e-03 lowCoverage 9.9975e-01 2.4298e-02 lowCoverage 1.0000e+00 1.9132e-01 lowCoverage -0.1236145 3.1273e-02 lowCoverage 0.28174097 lowCoverage chr22 23456496 23457496 56523 ENSG00000185956 0.7697364 228 6 0.610560 75 6 0.663034 107 4 0.8225328 266 6 0.8061869 56 4 0.810527 284 6 0.846016 52 4 0.7690476 57 5 0.6464286 48 4 0.6064626 75 6 0.700936 125 6 0.781325 53 4 0.6668254 100 6 NA 0 0 0.527778 74 4 0.5592593 34 3 0.7701465 35 4 0.8356078 140 6 0.848856 134 6 0.786006 267 6 0.793333 27 2 0.9333333 38 3 0.842749 133 6 0.845238 47 3 0.8666667 26 4 0.7748754 265 6 0.941429 44 3 0.7666667 32 3 0.756035 63 5 0.7969503 194 6 0.820558 221 6 0.776326 362 6 0.7886489 69 5 0.6247507 83 4 0.7329900 207 6 0.8200337 64 6 0.8814460 51 4 0.7331680 202 6 0.835496 235 6 0.8408583 298 6 0.8191262 224 6 0.7587194 163 6 0.864344 320 6 0.8277658 0.668029 0.770434 0.8483029 0.8559835 0.8527235 0.8285080 0.8684478 0.7597237 0.8108506 0.806623 0.855926 0.8167967 NA 0.7824427 0.6098388 0.7688533 0.8707505 0.8868564 0.858221 0.834606 0.95928753 0.8799369 0.9777354 0.86895674 0.8272427 0.9544711 0.9771291 0.840463 0.879522 0.8704740 0.830618 0.9028357 0.7435344 0.6998569 0.8800679 0.9224953 0.7387617 0.8650283 0.8843370 0.8570300 0.8462378 0.8996397 2 0.799548 0.831956 -2.8688e-02 6 0.761294 0.763659 -0.0023656 0.96712922 1.2708e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9983266 0.00698763 weaklyHypometh 1 0.39355 insignificant -0.09842884 0.0022875 lowCoverage 0.75877 lowCoverage 0.799728 0.7973373 0.01745310 6 0.777065 0.765310 0.01175467 6.5443e-02 6.7570e-01 insignificant 2.9747e-01 1.0000e+00 insignificant 2.0988e-01 4.2356e-01 insignificant 9.8534e-01 1.0000e+00 insignificant -3.5755e-02 4.2455e-01 lowCoverage 1.0000e+00 lowCoverage 0.799728 0.8443548 -0.05166330 6 0.777065 0.832092 -0.05502769 9.9628e-01 4.4941e-02 weaklyHypometh 1.0000e+00 6.7516e-01 insignificant 9.9523e-01 4.0623e-02 weaklyHypometh 1.0000e+00 6.5844e-01 insignificant -9.5957e-02 4.2703e-03 lowCoverage 1.3775e-01 lowCoverage 0.832414 0.7973373 0.03976195 6 0.807602 0.765310 0.04229233 9.6570e-04 9.6135e-01 weaklyHypermeth 6.7532e-03 1.0000e+00 weaklyHypermeth 6.0887e-03 9.8687e-01 weaklyHypermeth 5.0842e-02 1.0000e+00 weaklyHypermeth 6.2674e-02 1.5979e-01 lowCoverage 8.4324e-01 lowCoverage 0.832414 0.8443548 -0.02688692 6 0.807602 0.832092 -0.02449003 9.1232e-01 7.0181e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 3.9543e-01 5.6663e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00247139 9.2376e-01 lowCoverage 1.0000e+00 lowCoverage 0.7973373 0.8443548 -0.06847740 6 0.765310 0.832092 -0.0667824 9.8884e-01 1.5530e-03 weaklyHypometh 1.0000e+00 1.4248e-02 weaklyHypometh 9.7192e-01 3.2465e-03 weaklyHypometh 1.0000e+00 3.9592e-02 weaklyHypometh -0.0602025 1.7614e-01 insignificant 0.84376402 insignificant chr22 23702496 23703496 56530 TMEM211 ENSG00000206069 0.8408213 83 4 0.856331 44 4 0.750000 64 3 0.9215753 84 6 0.6979167 27 3 0.896991 72 4 0.819444 53 4 0.7777778 30 3 0.9131944 28 3 0.7500000 12 0 0.884762 73 4 0.916667 12 0 0.6666667 39 3 0.809524 21 3 0.794872 39 3 0.9166667 12 0 NA 0 0 0.6571793 83 4 0.750000 21 3 0.905702 65 3 0.883013 39 3 0.6785714 22 3 0.652778 44 4 0.812500 27 3 0.8443306 173 4 0.8698413 57 4 0.821711 60 3 1.0000000 7 0 0.916667 13 0 0.7928571 74 4 0.918986 58 4 0.972222 40 4 0.4068627 63 4 0.4509804 102 3 0.6778846 124 6 0.4564117 235 6 0.3191176 52 4 0.4655797 89 4 0.870484 106 5 0.8952381 81 5 0.9220121 126 4 0.7652244 102 4 0.792759 136 7 0.7260870 0.808442 0.750000 0.8315018 0.7638889 0.8148148 0.8259259 0.8148148 0.8842593 0.7500000 0.846349 0.916667 0.6666667 0.809524 0.7948718 0.9166667 NA 0.6847291 0.6666667 0.811404 0.844017 0.67857143 0.6388889 0.8333333 0.79244078 0.7629630 0.7622807 1.0000000 0.888889 0.738095 0.8412698 0.962963 0.4313725 0.4509804 0.6666667 0.1929825 0.2588235 0.6811594 0.8656126 0.8111111 0.8135377 0.7564103 0.6866097 0 0.806265 0.802632 3.8870e-03 3 0.885291 0.857361 0.0279296 0.23529192 6.3423e-01 lowCoverage 1.00000 1.0000e+00 lowCoverage 0.8174700 0.52777196 lowCoverage 1 1.00000 lowCoverage -0.02979370 0.4232057 lowCoverage 1.00000 lowCoverage 0.805134 0.5256798 0.34377228 3 0.866173 0.592105 0.27406766 6.7274e-11 1.0000e+00 lowCoverage 9.3437e-10 1.0000e+00 lowCoverage 9.4100e-06 1.0000e+00 lowCoverage 1.6224e-04 1.0000e+00 lowCoverage 3.5436e-01 2.9269e-04 lowCoverage 5.8538e-03 lowCoverage 0.806265 0.8139963 0.00857201 3 0.885291 0.822462 0.06282856 4.1420e-02 2.9621e-01 lowCoverage 4.1838e-01 1.0000e+00 lowCoverage 1.4290e-01 6.9797e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -3.1981e-02 4.0288e-01 lowCoverage 1.0000e+00 lowCoverage 0.802632 0.5248120 0.34519689 4 0.875191 0.506579 0.36861231 6.0759e-06 9.9990e-01 lowCoverage 6.1999e-05 1.0000e+00 lowCoverage 1.8297e-04 1.0000e+00 lowCoverage 2.6138e-03 1.0000e+00 lowCoverage 3.8415e-01 8.2674e-05 lowCoverage 2.1756e-03 lowCoverage 0.802632 0.8139963 0.00429935 4 0.857361 0.822462 0.03489892 1.7908e-01 5.8873e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 2.5207e-01 9.2553e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.00218717 9.6006e-01 lowCoverage 1.0000e+00 lowCoverage 0.5256798 0.8143939 -0.30218709 5 0.592105 0.826206 -0.2341010 9.9955e-01 6.3837e-04 hypomethylated 1.0000e+00 6.7912e-03 hypomethylated 1.0000e+00 4.7385e-04 hypomethylated 1.0000e+00 8.9405e-03 hypomethylated -0.3863374 1.3261e-04 lowCoverage 0.00576548 lowCoverage chr22 25187796 25188796 56557 ASPHD2 ENSG00000128203 0.9327550 117 5 0.873638 225 5 0.881526 151 5 0.7711224 107 5 0.9448509 140 5 0.902109 242 5 0.878926 193 5 0.8608940 156 5 0.7510906 142 5 0.9148878 101 5 0.764701 311 5 0.849735 86 5 0.9218599 117 5 0.946032 71 3 0.834205 142 5 0.8618326 59 3 0.9393939 90 4 0.9011159 109 5 0.963314 113 4 0.893441 219 5 0.879582 85 5 0.9616228 69 5 0.908581 110 5 0.783252 127 5 0.9269841 46 4 0.9156582 230 5 0.873598 138 5 0.7976190 67 6 0.910952 105 5 0.9621837 232 5 0.941699 230 5 0.844624 298 5 0.9301933 110 5 0.9000000 45 4 0.7500000 109 4 0.8892857 24 2 0.9365313 205 5 0.8438765 151 5 0.716947 120 5 0.8489708 125 5 0.9225641 78 4 0.6960317 105 4 0.943464 121 5 0.9073524 0.873970 0.910407 0.9219630 0.9330261 0.9206221 0.9382770 0.8489184 0.8915176 0.9564928 0.912173 0.832321 0.9313723 0.921244 0.9312878 0.8929813 0.9307457 0.9796308 0.9539241 0.915190 0.860328 0.96044543 0.8976767 0.9468191 0.90820973 0.9134529 0.8676990 0.9399883 0.919916 0.966634 0.9329387 0.912545 0.9350020 0.9168033 0.7338961 0.8345951 0.9529052 0.8537879 0.8731826 0.8450308 0.9388819 0.9116315 0.9400983 3 0.912141 0.919401 -7.0060e-03 5 0.848383 0.850910 -0.0025272 0.63621023 5.1258e-01 insignificant 1.00000 1.0000e+00 insignificant 0.2188817 0.64759617 insignificant 1 1.00000 insignificant -0.01282481 0.5624529 lowCoverage 1.00000 lowCoverage 0.915591 0.9161491 0.00048121 5 0.918059 0.899659 0.01840053 6.9441e-02 4.5210e-01 insignificant 3.1139e-01 1.0000e+00 insignificant 3.4442e-01 2.2309e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.3904e-03 8.9305e-01 lowCoverage 1.0000e+00 lowCoverage 0.912141 0.8925319 0.01776272 5 0.848383 0.734063 0.11431946 1.4646e-03 9.5173e-01 weaklyHypermeth 2.3960e-02 1.0000e+00 weaklyHypermeth 3.5400e-02 8.5056e-01 weaklyHypermeth 4.7077e-01 1.0000e+00 insignificant 5.3776e-02 3.6080e-01 lowCoverage 1.0000e+00 lowCoverage 0.922319 0.9161491 0.00742524 5 0.921092 0.899659 0.02143322 1.5379e-01 2.7899e-01 insignificant 6.2772e-01 1.0000e+00 insignificant 5.9959e-01 1.6080e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.7215e-02 6.1624e-01 lowCoverage 1.0000e+00 lowCoverage 0.919401 0.8925319 0.02540198 5 0.850910 0.734063 0.11684670 8.8646e-03 9.9208e-01 weaklyHypermeth 1.0831e-01 1.0000e+00 insignificant 7.7916e-02 9.4220e-01 insignificant 8.7546e-01 1.0000e+00 insignificant 0.06660081 2.7283e-01 lowCoverage 1.0000e+00 lowCoverage 0.9161491 0.8974359 0.00559900 5 0.899659 0.880876 0.0187828 9.5091e-02 6.9381e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.5469e-01 8.7861e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0493856 4.2966e-01 lowCoverage 1.00000000 lowCoverage chr22 25312896 25313896 56569 TPST2 ENSG00000128294 0.7006079 232 8 0.788073 208 7 0.725212 116 9 0.8107400 216 8 0.7699134 101 8 0.816489 340 8 0.839747 181 9 0.8645442 184 9 0.7997863 84 6 0.6775253 50 5 0.811408 265 9 0.795238 34 2 0.7949270 96 9 0.818150 89 8 0.745370 98 8 0.6916667 32 2 0.5000000 2 0 0.6751675 291 8 0.690171 218 8 0.762228 254 8 0.815527 85 7 0.8541667 25 1 0.867854 93 8 0.703102 88 6 0.7890443 119 7 0.7935060 209 9 0.806949 149 8 0.8036538 63 5 0.710502 251 8 0.7211696 252 9 0.737906 256 9 0.808656 281 8 0.7556701 178 8 0.6500642 201 8 0.6009083 352 8 0.6333333 39 4 0.6756013 193 9 0.6916936 280 9 0.852604 271 7 0.7425207 231 9 0.8613646 253 8 0.8070944 153 6 0.665240 221 8 0.8783618 0.859314 0.801625 0.8650505 0.9017213 0.8894231 0.8965377 0.8884192 0.8187614 0.8495370 0.886417 0.787925 0.8447559 0.857087 0.8208085 0.5934770 NA 0.8352536 0.8447447 0.848890 0.928762 0.87652924 0.9009500 0.8616544 0.85086996 0.8604640 0.8262603 0.9283425 0.899044 0.867335 0.8399168 0.873760 0.8070437 0.7088098 0.8026688 0.8309524 0.8410898 0.8610479 0.9084877 0.8856101 0.8703332 0.8642758 0.8833790 2 0.853445 0.845372 5.9392e-03 8 0.697763 0.674667 0.0230965 0.28247406 4.9082e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9954843 0.14346255 insignificant 1 1.00000 insignificant -0.03048823 0.2182295 insignificant 1.00000 insignificant 0.854917 0.7979066 0.10071314 8 0.727540 0.640735 0.08680477 1.1045e-04 9.8695e-01 weaklyHypermeth 8.2428e-04 1.0000e+00 weaklyHypermeth 1.0726e-01 8.6124e-01 insignificant 5.8293e-01 1.0000e+00 insignificant 8.5970e-02 1.0174e-02 weaklyHypermeth 9.6896e-02 weaklyHypermeth 0.853445 0.8758865 -0.01667417 8 0.697763 0.793600 -0.09583631 8.3898e-01 4.2314e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.3612e-01 1.9967e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -3.1917e-02 4.6643e-01 insignificant 1.0000e+00 insignificant 0.845824 0.7972647 0.07876321 8 0.689818 0.582486 0.10733203 5.6004e-04 6.4001e-01 weaklyHypermeth 4.2427e-03 1.0000e+00 weaklyHypermeth 4.1529e-03 9.7447e-01 weaklyHypermeth 3.8453e-02 1.0000e+00 weaklyHypermeth 1.1646e-01 1.4117e-03 weaklyHypermeth 2.0167e-02 weaklyHypermeth 0.845003 0.8759965 -0.02256956 8 0.660111 0.810800 -0.15068846 9.3253e-01 1.6903e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.7484e-01 3.5265e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.00142846 9.7276e-01 insignificant 1.0000e+00 insignificant 0.7972647 0.8774423 -0.10789577 8 0.582486 0.854206 -0.2717194 9.9986e-01 5.5530e-03 weaklyHypometh 1.0000e+00 4.0831e-02 weaklyHypometh 9.9922e-01 8.4542e-02 insignificant 1.0000e+00 5.0929e-01 insignificant -0.1178864 2.9683e-02 weaklyHypometh 0.27723991 insignificant chr22 25370796 25371796 56575 ENSG00000218556 0.0663718 512 7 0.060455 229 7 0.079662 219 7 0.1211977 333 7 0.0597387 202 7 0.166886 419 7 0.087383 230 7 0.0255973 272 7 0.0469351 374 7 0.1356163 338 7 0.096594 284 7 0.073979 394 7 0.0762714 379 7 0.101116 345 7 0.101971 413 7 0.0539386 221 7 0.0645604 93 7 0.0940627 718 7 0.078861 161 7 0.095643 412 7 0.057143 76 7 0.1416574 249 7 0.078713 348 7 0.029304 227 7 0.0401985 204 7 0.0656319 373 7 0.014615 140 6 0.0238509 135 7 0.061098 390 7 0.3346223 441 7 0.329409 312 7 0.043646 495 7 0.1270161 198 7 0.0204082 110 7 0.0000000 28 1 0.0000000 22 1 0.0173469 158 7 0.0296129 266 7 0.315726 411 7 0.2365477 410 7 0.2320353 460 7 0.1183036 398 7 0.182850 414 7 0.0608791 0.050998 0.075569 0.1112271 0.0551970 0.1512553 0.0807647 0.0281787 0.0495698 0.1260515 0.087320 0.065292 0.0647449 0.103143 0.0982138 0.0615733 0.0587563 0.0920476 0.0523049 0.089657 0.022951 0.14118785 0.0757973 0.0357293 0.03128260 0.0580875 0.0182277 0.0252887 0.042857 0.324439 0.3170307 0.029914 0.1444300 0.0207845 0.0000000 0.0000000 0.0150322 0.0353629 0.3200695 0.2378945 0.2317027 0.1174446 0.1805084 7 0.088882 0.115044 -2.8969e-02 7 0.090937 0.122274 -0.0313368 0.99950555 1.2470e-02 weaklyHypometh 1.00000 4.3623e-01 insignificant 0.2132629 0.94853402 insignificant 1 1.00000 insignificant -0.01731542 0.6120552 insignificant 1.00000 insignificant 0.088882 0.0537084 0.02735644 7 0.090937 0.051349 0.03958848 1.6857e-05 4.8031e-01 weaklyHypermeth 1.4918e-04 1.0000e+00 weaklyHypermeth 1.3565e-05 9.9944e-01 weaklyHypermeth 2.1531e-04 1.0000e+00 weaklyHypermeth 5.1945e-02 4.4162e-02 weaklyHypermeth 3.2713e-01 insignificant 0.088882 0.2379360 -0.14121996 7 0.090937 0.223122 -0.13218503 1.0000e+00 5.4308e-20 weaklyHypometh 1.0000e+00 5.4308e-17 weaklyHypometh 9.9979e-01 9.8194e-09 weaklyHypometh 1.0000e+00 9.8194e-06 weaklyHypometh -1.3275e-01 1.3665e-02 weaklyHypometh 2.4562e-01 insignificant 0.115044 0.0537084 0.05528428 7 0.122274 0.051349 0.07092527 6.0493e-03 9.7947e-01 weaklyHypermeth 3.5584e-02 1.0000e+00 weaklyHypermeth 3.8083e-03 9.8941e-01 weaklyHypermeth 3.6172e-02 1.0000e+00 weaklyHypermeth 6.9260e-02 8.6453e-02 insignificant 5.3039e-01 insignificant 0.115044 0.2379360 -0.11034080 7 0.122274 0.223122 -0.10084825 9.9949e-01 1.9248e-03 weaklyHypometh 1.0000e+00 1.4806e-01 insignificant 9.9918e-01 2.6796e-04 weaklyHypometh 1.0000e+00 6.6990e-02 weaklyHypometh -0.11543524 2.7945e-02 weaklyHypometh 5.2726e-01 insignificant 0.0537084 0.2379360 -0.16012992 7 0.051349 0.223122 -0.1717735 9.9995e-01 3.3918e-09 weaklyHypometh 1.0000e+00 1.0278e-07 weaklyHypometh 1.0000e+00 1.5599e-06 weaklyHypometh 1.0000e+00 8.3083e-05 weaklyHypometh -0.1846953 2.0814e-03 weaklyHypometh 0.03716842 weaklyHypometh chr22 25413596 25414596 56577 ENSG00000206028 0.8352507 373 10 0.701752 230 12 0.786686 169 9 0.8925528 271 10 0.8009740 78 9 0.801888 315 10 0.733548 144 6 0.7434343 196 9 0.6971416 117 6 0.8459596 104 9 0.879913 280 9 0.753409 65 5 0.8056232 165 11 0.837500 44 2 0.809942 189 9 0.7047952 59 5 0.6344962 80 5 0.8305481 341 10 0.833621 187 9 0.835224 258 10 0.780483 99 7 0.7451487 126 6 0.849647 238 10 0.765101 144 9 0.8499669 129 9 0.8494664 257 10 0.558117 97 7 0.5310976 75 6 0.785897 197 9 0.8542303 259 9 0.718425 224 11 0.743969 399 11 0.6710100 160 9 0.8766667 134 10 0.7476801 104 6 0.8066667 38 3 0.6214512 192 9 0.7842766 207 11 0.792904 401 10 0.7664048 277 9 0.7801102 249 9 0.8952060 249 9 0.823722 291 9 0.8449036 0.766301 0.789734 0.8984733 0.8078337 0.8415367 0.7802383 0.8568938 0.7340420 0.9318880 0.895178 0.729197 0.9083029 0.870061 0.8557714 0.7058410 0.7169729 0.8876394 0.9287972 0.909794 0.794513 0.92509667 0.8522329 0.9128103 0.94534961 0.9158990 0.7485792 0.6515880 0.925757 0.901242 0.8789796 0.874438 0.8050529 0.9077859 0.8409165 0.7493917 0.7959186 0.9180547 0.8890442 0.8938914 0.8806112 0.9272257 0.9160974 4 0.824284 0.844920 -1.4013e-02 9 0.792934 0.791530 0.0014043 0.66135816 2.8890e-01 insignificant 1.00000 1.0000e+00 insignificant 0.0780961 0.18299769 insignificant 1 1.00000 insignificant 0.03558386 0.3203532 insignificant 1.00000 insignificant 0.824284 0.8143713 0.01768722 9 0.792934 0.723242 0.06969159 5.8234e-02 7.0604e-01 insignificant 2.6960e-01 1.0000e+00 insignificant 2.9452e-01 6.9066e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.6921e-02 3.9754e-01 insignificant 1.0000e+00 insignificant 0.824284 0.8616224 -0.04941605 9 0.792934 0.812284 -0.01934955 9.6747e-01 2.6179e-02 weaklyHypometh 1.0000e+00 4.9395e-01 insignificant 8.7861e-01 6.1041e-03 weaklyHypometh 1.0000e+00 1.9075e-01 insignificant -2.3456e-02 4.1836e-01 insignificant 1.0000e+00 insignificant 0.844920 0.8143713 0.02850571 10 0.791530 0.723242 0.06828732 2.7973e-02 7.6709e-01 weaklyHypermeth 1.4199e-01 1.0000e+00 insignificant 7.4843e-02 3.5086e-01 insignificant 4.1349e-01 1.0000e+00 insignificant 1.3372e-03 9.7876e-01 insignificant 1.0000e+00 insignificant 0.844920 0.8616224 -0.03833352 10 0.791530 0.812284 -0.02075382 8.8692e-01 1.3104e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.3835e-01 1.6995e-02 weaklyHypometh 1.0000e+00 8.0926e-01 insignificant -0.05904028 1.4920e-01 insignificant 1.0000e+00 insignificant 0.8143713 0.8616224 -0.07217800 10 0.723242 0.812284 -0.0890411 9.7210e-01 4.1858e-04 weaklyHypometh 1.0000e+00 4.5497e-03 weaklyHypometh 9.7507e-01 8.3193e-03 weaklyHypometh 1.0000e+00 8.2369e-02 weaklyHypometh -0.0603775 2.1042e-01 insignificant 0.93519524 insignificant chr22 26164196 26165196 56606 ENSG00000200443 0.8090842 74 5 0.639091 49 5 0.462381 67 5 0.6000000 23 2 0.8056277 44 5 0.768470 60 5 0.861905 47 5 0.7062049 49 5 0.7633333 55 5 0.7950000 51 5 0.795520 108 5 0.855556 38 5 0.6771368 79 5 NA 0 0 0.781282 75 5 0.8800000 25 4 0.8018182 51 5 0.2500000 31 5 0.771696 65 5 0.762113 100 5 0.803939 55 5 0.3750000 28 3 0.854701 112 5 0.651648 52 5 0.5000000 8 0 0.7694949 54 5 0.818711 65 5 0.7486291 44 5 0.597985 44 5 0.8784921 51 5 0.891862 89 5 0.904953 144 5 0.0140394 93 5 0.0915288 66 5 0.1279070 84 2 0.0500000 31 3 0.0555556 44 5 0.0439560 108 5 0.074641 80 5 0.2022661 99 5 0.1833333 25 2 0.1469780 56 5 0.062222 32 4 0.8090319 0.656883 0.463764 0.5804989 0.8196660 0.7786333 0.8507937 0.7131863 0.7801587 0.8019841 0.790781 0.866667 0.6706349 NA 0.7542125 0.9028571 0.7843290 0.2209524 0.8118407 0.768360 0.809567 0.44007937 0.8684837 0.6612245 0.38571429 0.7958345 0.8516740 0.7951488 0.613448 0.877766 0.9065638 0.899677 0.0186958 0.1081991 0.0853627 0.0619048 0.0555556 0.0518053 0.0761158 0.2038547 0.1682540 0.1271324 0.0598942 2 0.736939 0.797587 -6.5911e-02 5 0.735415 0.798462 -0.0630465 0.98870507 2.8306e-02 weaklyHypometh 1.00000 6.1534e-01 insignificant 0.9095783 0.31110130 insignificant 1 1.00000 insignificant -0.00736097 0.9033556 lowCoverage 1.00000 lowCoverage 0.736939 0.0633803 0.67956991 5 0.735415 0.052627 0.68278805 1.0608e-37 1.0000e+00 hypermethylated 6.6300e-36 1.0000e+00 hypermethylated 4.9992e-13 1.0000e+00 hypermethylated 5.3730e-11 1.0000e+00 hypermethylated 6.6176e-01 1.6475e-14 lowCoverage 5.4917e-12 lowCoverage 0.736939 0.1404110 0.59761629 5 0.735415 0.140755 0.59466009 1.3529e-30 1.0000e+00 hypermethylated 6.7647e-28 1.0000e+00 hypermethylated 6.1458e-12 1.0000e+00 hypermethylated 2.0486e-09 1.0000e+00 hypermethylated 5.9170e-01 2.6478e-10 lowCoverage 2.6478e-07 lowCoverage 0.797587 0.0633803 0.74729994 5 0.798462 0.052627 0.74583452 2.3529e-32 1.0000e+00 hypermethylated 1.8099e-30 1.0000e+00 hypermethylated 1.6217e-10 1.0000e+00 hypermethylated 1.0811e-08 1.0000e+00 hypermethylated 6.6912e-01 6.0945e-09 lowCoverage 8.7064e-07 lowCoverage 0.797587 0.1404110 0.65742797 5 0.798462 0.140755 0.65770656 6.7525e-27 1.0000e+00 hypermethylated 6.7525e-24 1.0000e+00 hypermethylated 2.4887e-09 1.0000e+00 hypermethylated 8.2955e-07 1.0000e+00 hypermethylated 0.59906340 2.1771e-08 lowCoverage 2.1771e-05 lowCoverage 0.0633803 0.1404110 -0.08267243 5 0.052627 0.140755 -0.0881280 9.8874e-01 8.3832e-05 weaklyHypometh 1.0000e+00 1.0887e-03 weaklyHypometh 9.9531e-01 7.7226e-03 weaklyHypometh 1.0000e+00 7.7226e-02 weaklyHypometh -0.0700569 7.1553e-02 lowCoverage 0.50534882 lowCoverage chr22 26224296 26225296 56609 ENSG00000200443 0.8208273 154 5 0.766494 165 6 0.749953 187 6 0.8721289 55 5 0.8697771 71 5 0.845353 170 5 0.877195 205 5 0.7207359 100 4 0.7986254 130 6 0.8189394 119 6 0.839296 184 6 0.758529 128 5 0.8110520 164 6 NA 0 0 0.842973 159 5 0.7672915 92 4 0.7680827 168 5 0.8076953 57 4 0.814266 119 6 0.796504 234 6 0.819388 116 6 0.7305556 50 4 0.802782 148 6 0.814665 88 6 0.8777778 18 2 0.8394388 177 6 0.770762 86 6 0.8954040 84 5 0.843056 129 6 0.8700556 162 6 0.840455 192 6 0.868311 294 6 0.6787905 155 6 0.7708430 105 5 0.5000000 41 2 0.5234540 57 4 0.8376440 106 6 0.8244190 155 6 0.692915 119 4 0.7991192 127 5 0.7600840 65 4 0.7918766 146 5 0.732143 74 5 0.7327573 0.744126 0.727840 0.7965942 0.8445860 0.7971840 0.8503152 0.6938285 0.8087912 0.7817680 0.837844 0.801731 0.7811652 NA 0.7859948 0.7499343 0.7959525 0.7311105 0.7736167 0.754213 0.788206 0.64871274 0.7934358 0.8142950 0.82384824 0.8117200 0.7036516 0.8294272 0.813550 0.893770 0.8208795 0.875790 0.6649874 0.7549794 0.8534425 0.5981956 0.7600856 0.7352512 0.7476883 0.7201153 0.7716195 0.7247394 0.7021551 3 0.778279 0.817358 -3.8187e-02 6 0.808228 0.828886 -0.0206587 0.68353348 9.3690e-03 weaklyHypometh 1.00000 3.6035e-01 insignificant 0.4483340 0.01024161 weaklyHypometh 1 0.46553 insignificant -0.02338482 0.1822215 insignificant 1.00000 insignificant 0.778279 0.7108239 0.05519859 6 0.808228 0.755547 0.05268046 2.4804e-02 5.0508e-01 weaklyHypermeth 1.2852e-01 1.0000e+00 insignificant 2.3707e-02 6.3694e-01 weaklyHypermeth 1.5911e-01 1.0000e+00 insignificant 1.1848e-01 1.0889e-01 lowCoverage 6.4051e-01 lowCoverage 0.778279 0.7419962 0.04445354 5 0.808228 0.780770 0.02745755 4.5854e-04 3.0577e-01 weaklyHypermeth 9.1709e-03 1.0000e+00 weaklyHypermeth 2.4812e-03 2.6507e-01 weaklyHypermeth 5.2792e-02 1.0000e+00 weaklyHypermeth 5.2442e-02 5.3186e-02 lowCoverage 5.4492e-01 lowCoverage 0.817358 0.7108239 0.10143244 6 0.828886 0.755547 0.07333913 1.1890e-02 8.5442e-01 weaklyHypermeth 6.4970e-02 1.0000e+00 weaklyHypermeth 1.8775e-02 7.3841e-01 weaklyHypermeth 1.2352e-01 1.0000e+00 insignificant 1.4186e-01 6.6482e-02 lowCoverage 4.4322e-01 lowCoverage 0.817358 0.7419962 0.07771396 5 0.828886 0.780770 0.04811622 6.7696e-05 6.4269e-01 weaklyHypermeth 1.8296e-03 1.0000e+00 weaklyHypermeth 5.1938e-03 7.2663e-01 weaklyHypermeth 1.0600e-01 1.0000e+00 insignificant 0.07582663 1.2929e-02 lowCoverage 3.2323e-01 lowCoverage 0.7108239 0.7419962 -0.00065356 5 0.755547 0.780770 -0.0252229 6.2223e-01 5.7245e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.3435e-01 5.0883e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0660358 3.4008e-01 lowCoverage 1.00000000 lowCoverage chr22 26358496 26359496 56615 ENSG00000200443 0.9548458 140 8 0.875000 138 8 0.721532 174 8 0.9535714 124 3 0.9222384 188 8 0.935297 204 8 0.916910 305 8 0.9021239 264 8 0.8812729 170 8 0.9226190 151 8 0.926483 334 8 0.916667 98 8 0.9289051 147 8 0.860855 119 8 0.934479 198 8 0.9352679 141 8 NA 0 0 0.7355769 123 3 0.948843 243 7 0.950139 225 8 0.960968 121 8 0.5299768 96 8 0.880302 130 8 0.982143 80 3 0.9078526 57 3 0.9335231 250 8 0.897215 196 8 0.9130609 89 3 0.931016 218 3 0.9413753 261 8 0.882550 240 8 0.942029 197 8 0.6130487 184 8 0.7424975 232 8 0.7177419 299 3 0.3888889 18 3 0.5917361 206 8 0.7790560 318 8 0.773039 236 8 0.6918707 159 8 0.7222906 101 3 0.4140316 136 3 0.753472 109 8 0.9253552 0.751642 0.647946 0.8939245 0.8854139 0.9178355 0.8975499 0.8907898 0.8822586 0.8805419 0.951321 0.955939 0.8820434 0.811744 0.9275862 0.9844007 NA 0.5273437 0.8837696 0.929738 0.957533 0.55761648 0.8478135 0.9589491 0.91771662 0.9387591 0.8912059 0.9287319 0.844029 0.899112 0.8693694 0.953450 0.7615397 0.7675265 0.8626251 0.4265022 0.8474047 0.7794990 0.6934370 0.6937022 0.6240068 0.4638983 0.8013729 3 0.884648 0.892968 -5.6840e-03 8 0.899352 0.903671 -0.0043195 0.64538822 3.8070e-01 insignificant 1.00000 1.0000e+00 insignificant 0.6266698 0.18798471 insignificant 1 1.00000 insignificant 0.00935646 0.8051875 insignificant 1.00000 insignificant 0.884682 0.7738854 0.11430635 8 0.910535 0.650155 0.26037961 4.8054e-13 9.9738e-01 weaklyHypermeth 7.5084e-12 1.0000e+00 weaklyHypermeth 1.6966e-04 9.9963e-01 weaklyHypermeth 2.1476e-03 1.0000e+00 weaklyHypermeth 2.6236e-01 5.4237e-03 weaklyHypermeth 5.9601e-02 weaklyHypermeth 0.884648 0.6545209 0.22762683 8 0.899352 0.699765 0.19958727 4.1385e-18 1.0000e+00 hypermethylated 1.3795e-15 1.0000e+00 hypermethylated 5.7073e-09 1.0000e+00 hypermethylated 1.1415e-06 1.0000e+00 hypermethylated 2.3025e-01 2.2869e-02 weaklyHypermeth 3.2087e-01 insignificant 0.892506 0.7738854 0.13169221 8 0.803263 0.650155 0.15310808 2.1453e-08 9.9933e-01 weaklyHypermeth 2.8228e-07 1.0000e+00 weaklyHypermeth 3.3717e-04 9.9997e-01 weaklyHypermeth 4.4956e-03 1.0000e+00 weaklyHypermeth 2.5301e-01 5.0227e-03 weaklyHypermeth 5.5195e-02 weaklyHypermeth 0.892968 0.6545209 0.23263973 8 0.903671 0.699765 0.20390679 5.0119e-14 1.0000e+00 hypermethylated 1.2530e-11 1.0000e+00 hypermethylated 6.8119e-07 1.0000e+00 hypermethylated 1.3624e-04 1.0000e+00 hypermethylated 0.22089349 2.3189e-02 weaklyHypermeth 4.5468e-01 insignificant 0.7745020 0.6545209 0.12629585 8 0.731425 0.699765 0.0316602 1.3370e-03 3.2031e-01 weaklyHypermeth 7.8650e-02 1.0000e+00 weaklyHypermeth 1.1129e-01 2.7550e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0321127 7.2356e-01 insignificant 1.00000000 insignificant chr22 26562096 26563096 56633 MN1 ENSG00000169184 0.6382928 192 8 0.497677 143 8 0.592593 69 5 0.7246013 199 8 0.4537037 67 5 0.640409 237 8 0.595139 56 6 0.6143956 125 7 0.7936508 49 6 0.7484568 41 2 0.762279 266 8 0.718750 22 0 0.6886243 71 6 0.651786 35 2 0.555373 72 7 0.6250000 14 0 NA 0 0 0.6546972 179 8 0.748068 156 8 0.656343 178 8 0.689236 56 6 0.5678571 33 4 0.777778 108 8 0.564815 70 5 0.5342391 75 4 0.7382117 242 8 0.623557 73 8 0.6666667 28 3 0.737019 88 7 0.5871143 235 8 0.612947 253 8 0.735176 247 8 0.4597624 157 8 0.4419205 114 8 0.4642479 153 5 0.9000000 10 0 0.4504032 168 8 0.3751922 229 8 0.620337 189 8 0.5810830 172 8 0.6264015 220 8 0.5636364 120 8 0.683659 164 8 0.5649717 0.491248 0.473297 0.6621785 0.4652429 0.6888670 0.5482398 0.5594171 0.6704385 0.6365512 0.702570 0.631188 0.5559406 0.574257 0.4699931 0.5546317 NA 0.5852239 0.6547282 0.610482 0.731986 0.48910891 0.7508251 0.4543454 0.48455661 0.6435389 0.5361233 0.5000000 0.658530 0.551950 0.5440417 0.640676 0.3580870 0.3714501 0.4898556 0.5169744 0.3650838 0.3114328 0.5196626 0.4823484 0.5651059 0.4894389 0.6133893 0 0.628743 0.617021 2.0866e-03 8 0.700888 0.670639 0.0302496 0.66997546 5.8795e-01 insignificant 1.00000 1.0000e+00 insignificant 0.4775083 0.74593718 insignificant 1 1.00000 insignificant -0.00236692 0.9403581 insignificant 1.00000 insignificant 0.627842 0.3128761 0.23977772 8 0.660150 0.428204 0.23194597 2.7409e-16 1.0000e+00 hypermethylated 5.4817e-15 1.0000e+00 hypermethylated 1.8111e-06 9.9665e-01 hypermethylated 3.6222e-05 1.0000e+00 hypermethylated 1.3526e-01 1.4740e-01 insignificant 7.7489e-01 insignificant 0.627842 0.4647399 0.05828775 8 0.660150 0.617868 0.04228269 1.3273e-02 5.7190e-01 weaklyHypermeth 1.5616e-01 1.0000e+00 insignificant 2.4821e-02 4.7386e-01 weaklyHypermeth 3.6502e-01 1.0000e+00 insignificant 3.5494e-02 2.4606e-01 insignificant 1.0000e+00 insignificant 0.617135 0.3128761 0.24514862 8 0.659628 0.428204 0.23142425 1.5487e-13 1.0000e+00 hypermethylated 3.2265e-12 1.0000e+00 hypermethylated 1.0362e-04 9.9986e-01 hypermethylated 1.5465e-03 1.0000e+00 hypermethylated 1.3763e-01 1.4314e-01 insignificant 7.8647e-01 insignificant 0.617135 0.4647399 0.06187900 8 0.659628 0.617868 0.04176097 1.9322e-01 6.0610e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.1440e-01 6.3629e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03786131 2.5114e-01 insignificant 1.0000e+00 insignificant 0.3128761 0.4647399 -0.17853281 8 0.428204 0.617868 -0.1896633 1.0000e+00 4.2346e-07 weaklyHypometh 1.0000e+00 8.8221e-06 weaklyHypometh 9.9999e-01 5.3214e-04 weaklyHypometh 1.0000e+00 9.6753e-03 weaklyHypometh -0.0997691 2.6543e-01 insignificant 1.00000000 insignificant chr22 27168396 27169396 56655 TTC28 ENSG00000100154 0.0456349 124 8 0.012931 167 6 0.014270 220 8 0.0048077 151 6 0.0000000 131 6 0.077020 147 8 0.020119 253 6 0.0000000 122 8 0.0383185 184 5 0.0056818 187 8 0.046032 152 8 0.020625 198 8 0.0020408 167 7 0.111111 32 3 0.012500 143 8 0.0040323 151 5 0.0026954 151 5 0.0578125 90 7 0.000000 108 6 0.068824 128 8 0.047727 31 2 0.0612245 67 7 0.011983 64 4 0.031250 69 8 0.1250000 142 6 0.0208333 204 8 0.030556 78 8 0.0357143 63 6 0.070833 123 8 0.0549147 221 8 0.021092 203 6 0.040781 180 7 0.0087719 137 6 0.0049020 96 6 0.0000000 28 2 0.0326531 65 2 0.2143303 86 6 0.0148148 179 8 0.033654 160 8 0.0454545 105 8 0.0089286 79 7 0.0208333 45 4 0.055556 128 7 0.0429021 0.019519 0.015499 0.0018142 0.0000000 0.0952925 0.0212837 0.0000000 0.0539364 0.0068611 0.072327 0.032609 0.0184512 0.142049 0.0150943 0.0021302 0.0187538 0.0727594 0.0000000 0.086127 0.067067 0.06525266 0.0113249 0.0377358 0.00056263 0.0314465 0.0368973 0.0485175 0.096855 0.079947 0.0422429 0.054159 0.0256538 0.0212727 0.0378263 0.0417405 0.1508676 0.0237596 0.0413643 0.0548885 0.0134771 0.0110063 0.0670860 0 0.025974 0.044506 -1.0795e-02 8 0.024935 0.035519 -0.0105844 0.59330992 3.7799e-01 insignificant 1.00000 1.0000e+00 insignificant 0.8226145 0.36067564 insignificant 1 1.00000 insignificant -0.01876959 0.1077287 insignificant 1.00000 insignificant 0.025974 0.0374787 -0.00577143 6 0.024935 0.048473 -0.02353851 6.5939e-01 1.4417e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.0692e-01 3.5646e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -1.8689e-02 6.1163e-01 insignificant 1.0000e+00 insignificant 0.025974 0.0270793 -0.00509671 8 0.024935 0.041052 -0.01611763 6.7223e-01 6.4590e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.0741e-01 9.8850e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -5.6624e-03 6.1393e-01 insignificant 1.0000e+00 insignificant 0.046431 0.0372250 0.01440660 6 0.116741 0.035253 0.08148790 9.8540e-01 9.5381e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8291e-01 9.6062e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.0339e-05 9.9825e-01 insignificant 1.0000e+00 insignificant 0.044506 0.0270793 0.01491400 8 0.035519 0.041052 -0.00553325 7.8050e-01 8.2722e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.6822e-01 9.9872e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01310718 2.9988e-01 insignificant 1.0000e+00 insignificant 0.0374787 0.0270793 0.00210209 6 0.048473 0.041052 0.0074209 6.6490e-01 9.7326e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.8470e-01 9.9810e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0130268 7.2349e-01 insignificant 1.00000000 insignificant chr22 27653996 27654996 56675 ZNRF3 ENSG00000183579 0.7262590 247 9 0.582561 159 9 0.636717 127 9 0.7992959 195 9 0.5291667 74 5 0.674517 398 9 0.655105 102 9 0.6996764 173 9 0.7388904 138 9 0.7753050 103 9 0.668397 231 9 0.731667 74 5 0.7340119 192 9 0.583333 33 4 0.769059 104 9 0.7234568 49 5 0.6326840 45 4 0.7431901 226 9 0.666902 150 6 0.747835 338 9 0.819697 74 5 0.7949495 92 9 0.664451 163 9 0.680038 102 9 0.7316959 67 7 0.6405833 237 9 0.647539 100 8 0.8109848 65 5 0.549961 118 8 0.7196666 200 9 0.643292 228 9 0.682143 463 9 0.6207263 162 9 0.5943376 130 9 0.6878073 164 9 0.6963557 65 4 0.6594089 113 9 0.6479969 232 9 0.571610 168 9 0.7719801 209 9 0.7065113 161 9 0.7110560 162 5 0.705722 176 9 0.7199413 0.643404 0.611536 0.7785123 0.6299083 0.7136808 0.6300172 0.6650723 0.7264321 0.7515509 0.722383 0.703883 0.7058902 0.722650 0.7647362 0.7344840 0.5223315 0.7433758 0.6858258 0.770661 0.781782 0.73657939 0.6977924 0.7014577 0.69625655 0.6671049 0.6279867 0.7355820 0.664557 0.715251 0.7343820 0.720862 0.6219116 0.6246515 0.6822894 0.7138282 0.6464486 0.6593698 0.7182230 0.7403506 0.7478698 0.8269638 0.7461932 4 0.727359 0.713162 1.3772e-02 9 0.723589 0.645413 0.0781765 0.42583280 9.8940e-01 insignificant 1.00000 1.0000e+00 insignificant 0.8440210 0.89574715 insignificant 1 1.00000 insignificant -0.00784872 0.7834122 insignificant 1.00000 insignificant 0.727013 0.6535797 0.07035450 9 0.673332 0.617993 0.05533989 2.5307e-05 9.7346e-01 weaklyHypermeth 2.1266e-04 1.0000e+00 weaklyHypermeth 1.2559e-02 8.3734e-01 weaklyHypermeth 9.2942e-02 1.0000e+00 weaklyHypermeth 3.9796e-02 9.7435e-02 insignificant 5.9103e-01 insignificant 0.727359 0.7577143 -0.04272377 9 0.723589 0.667267 0.05632168 9.3168e-01 1.3961e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.9945e-01 1.1450e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -2.4746e-03 9.4826e-01 insignificant 1.0000e+00 insignificant 0.713085 0.6535797 0.05620733 9 0.671851 0.617993 0.05385859 4.4088e-04 8.7649e-01 weaklyHypermeth 3.3914e-03 1.0000e+00 weaklyHypermeth 6.7614e-03 7.8310e-01 weaklyHypermeth 5.4971e-02 1.0000e+00 weaklyHypermeth 4.7645e-02 1.0985e-01 insignificant 6.2769e-01 insignificant 0.713463 0.7568493 -0.05605682 9 0.670740 0.619605 0.05113483 9.9943e-01 1.5186e-02 weaklyHypometh 1.0000e+00 4.8988e-01 insignificant 9.8604e-01 1.4676e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00537411 8.9700e-01 insignificant 1.0000e+00 insignificant 0.6535797 0.7583047 -0.11419526 9 0.617993 0.697680 -0.0796870 9.9970e-01 2.0260e-05 weaklyHypometh 1.0000e+00 2.7754e-04 weaklyHypometh 9.9884e-01 1.9261e-03 weaklyHypometh 1.0000e+00 2.7128e-02 weaklyHypometh -0.0422706 2.9261e-01 insignificant 1.00000000 insignificant chr22 27756396 27757396 56681 ENSG00000177993 0.0050595 481 8 0.201184 362 9 0.110132 289 8 0.0036312 411 8 0.0112536 200 9 0.190546 573 8 0.105867 401 9 0.0068922 280 8 0.0022523 358 8 0.0800059 402 8 0.288828 311 9 0.022202 237 8 0.0075530 257 8 0.000000 30 3 0.097786 300 8 0.0035714 245 8 0.1666667 271 5 0.0059525 662 8 0.003003 179 9 0.090089 515 8 0.076923 112 8 0.0049020 427 8 0.074124 249 8 0.105295 187 8 0.0061728 560 8 0.1056015 435 9 0.052020 335 8 0.0064103 80 8 0.023145 210 8 0.1172926 470 9 0.087442 363 9 0.151158 513 8 0.0500873 272 9 0.1133752 228 8 0.2000000 26 3 0.0096154 274 8 0.1227345 121 5 0.1049655 393 9 0.104886 559 9 0.0931015 466 9 0.0052288 401 9 0.0099516 467 8 0.011569 518 9 0.0044674 0.025610 0.030958 0.0074195 0.0127756 0.0118359 0.0222763 0.0087125 0.0040680 0.0156688 0.016928 0.028770 0.0090915 0.010525 0.0109946 0.0048601 0.0020929 0.0093539 0.0039565 0.011999 0.000000 0.00590257 0.0056798 0.0445272 0.00756014 0.0190603 0.0103093 0.0118953 0.026910 0.018569 0.0075698 0.034353 0.0474508 0.0203428 0.0218318 0.0088818 0.1243610 0.0074587 0.0064696 0.0286797 0.0072771 0.0107698 0.0150214 8 0.016267 0.018782 -2.4111e-03 8 0.151302 0.063609 0.0876923 0.76562341 9.3070e-01 insignificant 1.00000 1.0000e+00 insignificant 0.8371630 0.97244846 insignificant 1 1.00000 insignificant 0.00258315 0.9140823 insignificant 1.00000 insignificant 0.015845 0.0357959 -0.01775829 8 0.126007 0.104957 0.02104992 8.4994e-01 7.4655e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.5709e-01 2.5861e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -3.0006e-02 3.8045e-01 insignificant 1.0000e+00 insignificant 0.015277 0.0165906 -0.00065588 8 0.076711 0.084600 -0.00788959 9.3123e-01 9.1222e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7923e-01 8.5448e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.5176e-02 4.0766e-01 insignificant 1.0000e+00 insignificant 0.019065 0.0357686 -0.01559934 8 0.134061 0.098397 0.03566376 9.6466e-01 4.0160e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8280e-01 3.5171e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -3.2589e-02 3.1263e-01 insignificant 1.0000e+00 insignificant 0.018830 0.0165906 0.00253629 8 0.088075 0.084600 0.00347414 5.7649e-01 7.9582e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.1355e-01 7.6433e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02259325 4.1714e-01 insignificant 1.0000e+00 insignificant 0.0358505 0.0165906 0.01849155 8 0.121104 0.084600 0.0365034 7.6712e-01 9.9561e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.9582e-01 9.9923e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0551824 1.4642e-01 insignificant 0.76259198 insignificant chr22 27756996 27757996 56682 ENSG00000177993 0.6076923 84 5 0.364966 210 5 0.396307 180 5 0.6058398 112 5 0.4525123 107 5 0.703682 125 5 0.473347 99 5 0.4282293 183 5 0.4455732 182 5 0.6924168 112 5 0.543992 158 5 0.315000 62 5 0.3093471 188 5 0.523913 128 5 0.443319 214 5 0.4224387 47 2 0.2500000 5 0 0.3799794 160 5 0.320681 253 5 0.477196 93 5 0.820000 57 5 0.4420737 116 5 0.623932 72 5 0.355604 61 2 0.3125490 40 2 0.4747136 226 5 0.450993 222 5 0.7040816 60 6 0.459353 227 5 0.6072687 308 5 0.414823 292 5 0.709389 140 5 0.4689672 111 5 0.6151515 89 5 0.8000000 191 5 0.0000000 13 2 0.3236571 123 5 0.0097303 206 5 0.526891 97 5 0.4312500 88 5 0.4803226 78 5 0.4000316 81 5 0.450989 96 5 0.7023938 0.526623 0.450033 0.6954680 0.5792589 0.6864182 0.5917029 0.5450730 0.5163506 0.7016546 0.713655 0.228065 0.3318034 0.616621 0.5664248 0.6802676 0.5590711 0.3615246 0.4520716 0.596073 0.752404 0.41592966 0.7141909 0.6443639 0.43228695 0.5528328 0.6790589 0.6497253 0.643499 0.722342 0.6488731 0.692606 0.7325370 0.6659965 0.8990385 0.0000000 0.4520521 0.0185519 0.6598035 0.5129207 0.5474643 0.3393466 0.4669085 2 0.517765 0.602965 -8.9974e-02 5 0.377977 0.561618 -0.1836413 0.99873129 1.1239e-03 weaklyHypometh 1.00000 1.4049e-01 insignificant 0.9765966 0.11674402 insignificant 1 1.00000 insignificant -0.07341010 0.1857435 lowCoverage 1.00000 lowCoverage 0.518148 0.4843111 0.02700457 5 0.440973 0.366279 0.07469379 1.7432e-01 8.3876e-01 insignificant 6.8630e-01 1.0000e+00 insignificant 1.1149e-01 9.5922e-01 insignificant 6.0264e-01 1.0000e+00 insignificant 8.8237e-02 5.4005e-01 lowCoverage 1.0000e+00 lowCoverage 0.517765 0.5204545 0.02975795 5 0.377977 0.582244 -0.20426710 3.1461e-01 6.9889e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.2017e-01 7.4134e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -7.5085e-05 9.9833e-01 lowCoverage 1.0000e+00 lowCoverage 0.602755 0.4843111 0.11439158 5 0.544110 0.366279 0.17783084 3.4040e-02 9.9340e-01 weaklyHypermeth 1.6797e-01 1.0000e+00 insignificant 9.6342e-02 9.9371e-01 insignificant 5.1246e-01 1.0000e+00 insignificant 1.6165e-01 2.8991e-01 lowCoverage 1.0000e+00 lowCoverage 0.602965 0.5204545 0.12850495 5 0.561618 0.582244 -0.02062583 5.3148e-03 9.5255e-01 weaklyHypermeth 7.2806e-02 1.0000e+00 weaklyHypermeth 3.8014e-02 9.4457e-01 weaklyHypermeth 4.7409e-01 1.0000e+00 insignificant 0.07333501 1.6749e-01 lowCoverage 1.0000e+00 lowCoverage 0.4843111 0.5193622 0.00764299 5 0.366279 0.512618 -0.1463387 7.3128e-01 8.7063e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.7684e-01 6.5444e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0883123 5.3723e-01 lowCoverage 1.00000000 lowCoverage chr22 27796996 27797996 56684 C22orf31 ENSG00000100249 0.1181367 1320 32 0.092409 621 31 0.167196 806 33 0.1412717 1125 28 0.1253084 522 31 0.134422 1395 32 0.140571 886 33 0.1038434 684 33 0.1318920 926 34 0.0935709 982 34 0.158354 1050 35 0.099198 780 30 0.1110026 941 33 0.110168 218 12 0.109417 922 33 0.1403118 820 33 0.1208489 690 32 0.1667879 1161 27 0.092046 561 29 0.165144 1249 32 0.107513 388 28 0.0848133 810 31 0.104914 756 33 0.127788 437 33 0.1880814 600 26 0.1072352 1034 33 0.067691 634 29 0.0893710 372 25 0.175120 568 30 0.1080635 1149 33 0.160967 975 33 0.091640 1471 33 0.1046150 601 34 0.0633452 600 30 0.1000000 471 20 0.0420415 452 25 0.1105617 466 28 0.0757382 767 33 0.231477 1455 28 0.1176974 1371 30 0.1278109 1198 27 0.1359367 1279 25 0.183039 1443 28 0.0854103 0.070357 0.120551 0.0714273 0.0650127 0.1009755 0.0848396 0.0652583 0.0869561 0.0662817 0.084599 0.059875 0.0672353 0.075573 0.0707485 0.0623930 0.0870889 0.0875658 0.0437945 0.114475 0.103011 0.05920396 0.0553493 0.1165332 0.08636131 0.0541715 0.0700055 0.0895241 0.096986 0.047768 0.0581302 0.076832 0.0609452 0.0516383 0.0692674 0.0358145 0.0819000 0.0442030 0.1100864 0.0825882 0.0717324 0.0907827 0.1324554 25 0.092140 0.089851 1.2949e-02 33 0.175936 0.120538 0.0553984 0.00020787 9.9866e-01 weaklyHypermeth 0.10535 1.0000e+00 insignificant 0.0013903 0.99873767 weaklyHypermeth 1 1.00000 insignificant 0.00832849 0.5072980 insignificant 1.00000 insignificant 0.092088 0.0825141 0.03453288 33 0.153664 0.115995 0.03766959 1.6617e-12 9.9240e-01 weaklyHypermeth 2.4436e-11 1.0000e+00 weaklyHypermeth 5.2112e-09 9.9999e-01 weaklyHypermeth 2.0043e-07 1.0000e+00 weaklyHypermeth 4.3378e-02 8.2579e-03 weaklyHypermeth 8.4292e-02 weaklyHypermeth 0.092088 0.1252594 -0.02137626 29 0.153664 0.175761 -0.02209626 8.8002e-01 1.1617e-14 weaklyHypometh 1.0000e+00 5.8083e-12 weaklyHypometh 9.5023e-01 8.5270e-08 weaklyHypometh 1.0000e+00 4.2635e-05 weaklyHypometh -3.3097e-02 1.9800e-01 insignificant 1.0000e+00 insignificant 0.089861 0.0825141 0.02336563 33 0.123796 0.115995 0.00780100 1.4813e-06 9.8441e-01 weaklyHypermeth 1.6278e-05 1.0000e+00 weaklyHypermeth 2.2052e-04 9.9913e-01 weaklyHypermeth 3.1059e-03 1.0000e+00 weaklyHypermeth 3.5050e-02 4.0673e-02 weaklyHypermeth 3.0581e-01 insignificant 0.089861 0.1252594 -0.03156194 29 0.123796 0.175761 -0.05196485 9.7002e-01 2.9485e-15 weaklyHypometh 1.0000e+00 2.9485e-12 weaklyHypometh 8.7194e-01 3.2131e-11 weaklyHypometh 1.0000e+00 3.2131e-08 weaklyHypometh -0.04142573 1.3195e-01 insignificant 1.0000e+00 insignificant 0.0825141 0.1252594 -0.04728499 29 0.115995 0.175761 -0.0597659 9.9938e-01 1.9020e-14 weaklyHypometh 1.0000e+00 9.0574e-13 weaklyHypometh 1.0000e+00 1.3231e-08 weaklyHypometh 1.0000e+00 1.6787e-06 weaklyHypometh -0.0764752 1.8390e-02 weaklyHypometh 0.19989385 insignificant chr22 28087996 28088996 56698 RASL10A ENSG00000100276 0.8207634 176 8 0.800259 96 7 0.961039 114 7 0.7625000 163 7 0.9250000 35 5 0.898483 166 9 0.676190 44 5 0.9514286 51 5 0.9733333 87 5 0.8014815 77 5 0.787931 131 5 1.000000 10 0 0.9449554 134 5 0.916667 47 2 0.978711 89 5 1.0000000 20 3 0.8406863 54 4 0.8151948 181 7 0.966667 36 2 0.774096 142 9 0.881429 28 4 0.9306667 78 5 0.848889 106 7 0.721429 44 4 0.9564706 55 4 0.8318182 113 6 0.612518 37 4 0.6150463 55 5 0.934566 50 5 0.9006410 98 6 0.842149 102 9 0.812580 251 9 0.9755102 77 6 0.9833333 38 3 0.9826087 68 4 0.8000000 20 2 0.7551587 48 5 0.7605102 91 7 0.876455 104 7 0.9192879 165 5 0.8190883 160 6 0.8946326 142 7 0.903491 143 7 0.9206068 0.859187 0.926290 0.9462924 0.9313063 0.9354157 0.8154440 0.9424710 0.9753754 0.9583584 0.926375 0.997772 0.9362143 0.909910 0.9760012 1.0000000 0.9399399 0.9159062 0.9549550 0.939115 0.896396 0.94444444 0.9387387 0.8037323 0.94928458 0.9221949 0.7172790 0.7482482 0.923158 0.948025 0.9631450 0.873601 0.9716860 0.9774775 0.9509298 0.7297297 0.9337194 0.8886040 0.9813385 0.9679606 0.9518365 0.9894012 0.8944164 2 0.905508 0.885939 2.8645e-02 5 0.780198 0.771940 0.0082578 0.20324283 9.4911e-01 insignificant 1.00000 1.0000e+00 insignificant 0.0921223 0.93806344 insignificant 1 1.00000 insignificant 0.05575248 0.1776001 insignificant 1.00000 insignificant 0.905457 0.9210526 0.00039074 4 0.760216 0.783750 -0.02353466 3.8639e-01 5.2280e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.4710e-01 6.1035e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 3.5824e-03 9.4660e-01 lowCoverage 1.0000e+00 lowCoverage 0.904968 0.9257703 -0.03214990 5 0.696864 0.870177 -0.17331285 9.3633e-01 3.8153e-02 weaklyHypometh 1.0000e+00 6.1537e-01 insignificant 9.9732e-01 4.8299e-02 weaklyHypometh 1.0000e+00 6.9998e-01 insignificant -2.8216e-03 9.1917e-01 insignificant 1.0000e+00 insignificant 0.885827 0.9210526 -0.02950018 4 0.751207 0.783750 -0.03254316 9.8697e-01 2.8160e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.9855e-01 4.1098e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -5.2170e-02 3.8853e-01 lowCoverage 1.0000e+00 lowCoverage 0.885827 0.9254571 -0.05834140 5 0.751207 0.858375 -0.10716797 9.9801e-01 4.0270e-02 weaklyHypometh 1.0000e+00 7.7341e-01 insignificant 9.9994e-01 1.1995e-02 weaklyHypometh 1.0000e+00 6.4273e-01 insignificant -0.05857413 1.4377e-01 insignificant 1.0000e+00 insignificant 0.9210526 0.9254571 -0.02887792 4 0.783750 0.858375 -0.0746248 9.9255e-01 1.7533e-01 lowCoverage 1.0000e+00 7.7239e-01 lowCoverage 9.7946e-01 3.8987e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.0064041 9.0240e-01 lowCoverage 1.00000000 lowCoverage chr22 28090096 28091096 56699 RASL10A ENSG00000100276 0.7656978 560 13 0.701882 399 14 0.695809 423 13 0.8670926 662 13 0.6799754 212 12 0.722351 500 14 0.658069 238 12 0.7870437 376 14 0.6974559 247 13 0.7554928 249 13 0.685446 579 13 0.716327 128 11 0.7152458 372 14 0.671776 160 12 0.751270 293 14 0.6955473 109 6 0.8382169 260 10 0.7826777 592 13 0.720174 246 14 0.754676 494 13 0.644937 143 13 0.5645923 239 10 0.747395 446 13 0.692145 172 12 0.7116213 149 10 0.7172758 493 14 0.629254 192 13 0.6788510 141 11 0.725962 292 13 0.7774049 551 14 0.696659 473 14 0.757016 706 13 0.6998032 343 14 0.7036100 245 12 0.6385391 347 13 0.7856752 145 6 0.7016012 268 13 0.6221599 429 14 0.791454 572 13 0.7678061 535 12 0.7933122 617 13 0.7339950 413 13 0.761487 489 13 0.8276150 0.740483 0.802298 0.8576644 0.8007024 0.8172242 0.7940874 0.8157101 0.7962073 0.8053163 0.811459 0.775566 0.8010649 0.745542 0.8082889 0.7124583 0.9192204 0.8440861 0.7973580 0.829867 0.673659 0.63614499 0.7495307 0.8320230 0.62839178 0.7661718 0.6675840 0.7387969 0.803752 0.820575 0.7540643 0.818419 0.7706305 0.7523350 0.6859077 0.8086632 0.7776339 0.7623880 0.8494711 0.8215598 0.8559532 0.8314186 0.8204549 9 0.809779 0.745309 5.6049e-02 13 0.741761 0.704625 0.0371359 0.00031606 9.7120e-01 weaklyHypermeth 0.10535 1.0000e+00 insignificant 0.0187125 0.97857529 weaklyHypermeth 1 1.00000 insignificant 0.03785173 0.0875078 insignificant 1.00000 insignificant 0.809752 0.7248171 0.06503278 13 0.726570 0.617881 0.10868953 1.4863e-06 9.9874e-01 weaklyHypermeth 1.4571e-05 1.0000e+00 weaklyHypermeth 2.8526e-03 9.8966e-01 weaklyHypermeth 2.5699e-02 1.0000e+00 weaklyHypermeth 4.1213e-02 1.6110e-01 insignificant 8.1676e-01 insignificant 0.809900 0.8088347 -0.01875930 13 0.734481 0.771776 -0.03729567 8.7451e-01 9.8515e-04 weaklyHypometh 1.0000e+00 4.5424e-02 weaklyHypometh 7.9180e-01 4.4382e-04 weaklyHypometh 1.0000e+00 4.0347e-02 weaklyHypometh -3.6500e-02 4.1502e-02 weaklyHypometh 4.6877e-01 insignificant 0.745368 0.7248171 0.01103349 13 0.706858 0.617881 0.08897706 2.2877e-01 8.7786e-01 insignificant 8.7677e-01 1.0000e+00 insignificant 3.8768e-01 8.3826e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.3615e-03 9.1078e-01 insignificant 1.0000e+00 insignificant 0.745988 0.8088347 -0.06770952 13 0.730203 0.771776 -0.04157350 9.7940e-01 1.8112e-04 weaklyHypometh 1.0000e+00 2.5875e-02 weaklyHypometh 9.8802e-01 8.1559e-06 weaklyHypometh 1.0000e+00 4.0779e-03 weaklyHypometh -0.07435125 2.3977e-03 weaklyHypometh 1.5984e-01 insignificant 0.7253243 0.8088347 -0.07297493 13 0.625248 0.771776 -0.1465283 9.9979e-01 3.2860e-07 weaklyHypometh 1.0000e+00 7.1435e-06 weaklyHypometh 9.9992e-01 3.5983e-05 weaklyHypometh 1.0000e+00 1.3652e-03 weaklyHypometh -0.0777127 2.0585e-02 weaklyHypometh 0.21442977 insignificant chr22 28145896 28146896 56705 AP1B1 ENSG00000100280 0.7644039 208 8 0.807425 296 8 0.694745 156 8 0.7744282 217 7 0.7810822 135 8 0.678107 278 8 0.766755 220 8 0.7975700 155 8 0.7484956 132 8 0.7962662 95 8 0.781167 295 8 0.763917 122 5 0.8371164 106 5 0.927273 32 3 0.836343 117 8 0.7895354 90 5 0.6066216 117 5 0.7369852 150 7 0.827020 229 8 0.756605 238 8 0.771886 62 8 0.7205882 73 4 0.790756 167 8 0.744894 87 7 0.6117168 210 7 0.7631631 229 8 0.792877 79 8 0.7462798 55 8 0.789352 100 8 0.8098678 272 8 0.795633 283 8 0.754860 270 8 0.7413504 215 8 0.7015848 202 8 0.5127446 146 7 0.6151130 200 7 0.8255512 157 8 0.7275180 298 8 0.765687 235 8 0.8020724 220 8 0.7672721 215 8 0.8278986 133 8 0.682230 240 7 0.6980709 0.722286 0.669761 0.7141200 0.7792684 0.7000862 0.7273837 0.7682435 0.7221179 0.7649812 0.735060 0.719369 0.7997199 0.731443 0.8042225 0.7647775 0.7643888 0.6488827 0.7947362 0.678419 0.667712 0.61257606 0.7349321 0.6744633 0.72463135 0.7261380 0.6952697 0.7039717 0.679239 0.752484 0.7505089 0.704449 0.6962842 0.6111614 0.5650478 0.5718634 0.7922574 0.6631868 0.7045251 0.7615613 0.6940208 0.8107196 0.5810243 4 0.791556 0.786433 1.4743e-02 8 0.759168 0.778159 -0.0189905 0.33040565 4.6984e-01 insignificant 1.00000 1.0000e+00 insignificant 0.2322327 0.25199631 insignificant 1 1.00000 insignificant 0.01593686 0.4591184 insignificant 1.00000 insignificant 0.791556 0.7241379 0.10783573 8 0.759168 0.713870 0.04529870 1.0660e-05 9.9915e-01 weaklyHypermeth 9.6037e-05 1.0000e+00 weaklyHypermeth 1.1314e-02 9.9773e-01 weaklyHypermeth 8.6301e-02 1.0000e+00 weaklyHypermeth 8.6283e-02 1.1450e-01 insignificant 6.6185e-01 insignificant 0.792012 0.7948226 0.02339763 8 0.782636 0.769108 0.01352764 1.0128e-01 1.7873e-01 insignificant 8.7313e-01 1.0000e+00 insignificant 1.5074e-01 3.4961e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.5609e-03 8.7805e-01 insignificant 1.0000e+00 insignificant 0.786433 0.7241379 0.09946557 8 0.778159 0.713870 0.06428918 1.0767e-03 9.6930e-01 weaklyHypermeth 7.4254e-03 1.0000e+00 weaklyHypermeth 1.1825e-02 9.4511e-01 weaklyHypermeth 8.6312e-02 1.0000e+00 weaklyHypermeth 7.0346e-02 1.8422e-01 insignificant 9.2412e-01 insignificant 0.786284 0.7948226 0.00716112 8 0.771262 0.769108 0.00215383 3.0742e-01 7.8645e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.8402e-01 6.3142e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01137598 7.0559e-01 insignificant 1.0000e+00 insignificant 0.7239113 0.7948226 -0.10317256 8 0.678103 0.769108 -0.0910048 8.9948e-01 3.4073e-02 weaklyHypometh 1.0000e+00 2.0282e-01 insignificant 8.7427e-01 9.5646e-02 insignificant 1.0000e+00 5.5933e-01 insignificant -0.0817218 1.4881e-01 insignificant 0.76708505 insignificant chr22 28315396 28316396 56714 NIPSNAP1 ENSG00000184117 0.7313335 397 13 0.693091 176 13 0.643635 193 13 0.7759226 271 13 0.7131082 103 11 0.765409 344 13 0.530092 174 13 0.6694005 195 13 0.6174423 157 13 0.7055846 152 13 0.715277 329 13 0.547636 70 4 0.7134644 202 13 0.818603 57 6 0.745066 216 13 0.6483586 91 8 0.6941392 80 8 0.7656120 289 13 0.747676 217 13 0.671669 304 12 0.821726 64 5 0.7662393 80 6 0.727326 309 13 0.766239 67 6 0.8360806 103 13 0.6992512 198 13 0.801592 110 8 0.7361389 70 5 0.772527 200 13 0.6936813 220 13 0.732213 262 13 0.707289 383 13 0.5490576 164 12 0.6853462 154 13 0.6491752 250 13 0.6963840 106 8 0.7167606 113 9 0.6820230 212 13 0.781523 361 13 0.7555461 397 13 0.7698353 339 13 0.8413828 278 9 0.741561 397 13 0.7468033 0.655872 0.646305 0.8105107 0.7390006 0.8005291 0.6329290 0.7291277 0.6862910 0.7145902 0.762340 0.645730 0.7332945 0.761590 0.7727443 0.6844192 0.7313695 0.7662370 0.7531616 0.730368 0.776588 0.82999661 0.7542144 0.7675695 0.85894551 0.7386306 0.7562009 0.7725112 0.764951 0.756578 0.7555162 0.711354 0.5649777 0.6750402 0.6595099 0.7001042 0.6892467 0.6812717 0.7541029 0.7919397 0.7988858 0.8622876 0.8084947 5 0.715459 0.743466 -2.3315e-02 13 0.727302 0.763155 -0.0358531 0.99955437 1.9527e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9999939 0.00453210 weaklyHypometh 1 0.39035 insignificant -0.05939945 0.0089159 weaklyHypometh 1.00000 insignificant 0.715212 0.6576577 0.06152253 13 0.702833 0.659269 0.04356494 5.0887e-05 9.8524e-01 weaklyHypermeth 3.9755e-04 1.0000e+00 weaklyHypermeth 1.5348e-02 7.5892e-01 weaklyHypermeth 1.0885e-01 1.0000e+00 insignificant 3.2501e-02 2.9556e-01 insignificant 1.0000e+00 insignificant 0.715176 0.7725734 -0.05914974 13 0.709122 0.793328 -0.08420520 9.9999e-01 1.4885e-04 weaklyHypometh 1.0000e+00 9.8765e-03 weaklyHypometh 1.0000e+00 2.4235e-05 weaklyHypometh 1.0000e+00 3.4622e-03 weaklyHypometh -8.2344e-02 4.4340e-03 weaklyHypometh 1.3856e-01 insignificant 0.742954 0.6576577 0.08474843 13 0.727730 0.659269 0.06846101 3.0156e-05 9.9988e-01 weaklyHypermeth 2.6925e-04 1.0000e+00 weaklyHypermeth 2.9180e-04 9.9984e-01 weaklyHypermeth 4.0528e-03 1.0000e+00 weaklyHypermeth 9.1901e-02 1.0866e-02 weaklyHypermeth 1.1088e-01 insignificant 0.743217 0.7725734 -0.03668939 13 0.747366 0.793328 -0.04596194 9.9956e-01 9.7054e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9312e-01 3.0883e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02294419 3.2265e-01 insignificant 1.0000e+00 insignificant 0.6576577 0.7723164 -0.12158213 13 0.659269 0.761532 -0.1022632 1.0000e+00 2.6266e-06 weaklyHypometh 1.0000e+00 4.6903e-05 weaklyHypometh 9.9972e-01 7.6699e-05 weaklyHypometh 1.0000e+00 2.4742e-03 weaklyHypometh -0.1148451 4.4131e-03 weaklyHypometh 0.06467389 weaklyHypometh chr22 28345996 28346996 56716 NF2 ENSG00000186575 0.7664390 265 8 0.693128 477 8 0.641183 160 8 0.8288690 202 8 0.7417263 432 8 0.769071 422 8 0.656335 352 7 0.7432229 588 8 0.7334960 429 8 0.7894375 442 8 0.787024 723 8 0.593427 306 5 0.8334531 601 8 0.758847 117 8 0.763301 511 8 0.6981777 250 5 0.5619994 207 3 0.7239697 251 8 0.806232 634 7 0.806004 274 8 0.701123 177 8 0.7720874 131 8 0.788332 188 8 0.772324 191 8 0.7125316 95 8 0.8033689 474 8 0.671877 189 8 0.6821942 114 7 0.817245 753 8 0.8699321 442 8 0.797960 395 8 0.748648 362 8 0.6721772 354 8 0.5586215 453 7 0.6943653 461 8 0.8588745 42 4 0.6979045 243 8 0.6736271 387 8 0.787865 207 8 0.7316152 232 8 0.7494813 198 8 0.8494048 261 8 0.809929 231 8 0.7082796 0.681388 0.668887 0.7915705 0.7230139 0.7207054 0.6418208 0.7322831 0.7079536 0.7398358 0.755867 0.661515 0.7807904 0.742016 0.7421008 0.7018861 0.6097380 0.6825862 0.7645731 0.812611 0.715885 0.69394980 0.7087783 0.7288865 0.67966696 0.7523831 0.7080310 0.6650081 0.768429 0.806044 0.7522407 0.712037 0.6737612 0.5799983 0.7124688 0.7526100 0.7017837 0.6822516 0.7458846 0.7191884 0.7362875 0.7932438 0.7644138 5 0.737407 0.758758 -1.9358e-02 8 0.755503 0.778693 -0.0231905 0.96932753 7.6235e-02 insignificant 1.00000 9.2970e-01 insignificant 0.8558111 0.28954204 insignificant 1 1.00000 insignificant -0.02670147 0.2763713 insignificant 1.00000 insignificant 0.737407 0.6963918 0.05321042 8 0.755503 0.675642 0.07986050 7.2150e-09 5.2902e-02 weaklyHypermeth 9.0187e-08 1.0000e+00 weaklyHypermeth 2.2852e-04 2.7726e-01 weaklyHypermeth 2.7533e-03 1.0000e+00 weaklyHypermeth 4.2172e-02 3.5700e-01 insignificant 1.0000e+00 insignificant 0.737407 0.7759079 -0.03171837 8 0.755503 0.795142 -0.03963896 9.4099e-01 1.8482e-02 weaklyHypometh 1.0000e+00 3.5543e-01 insignificant 9.4773e-01 5.8226e-02 insignificant 1.0000e+00 7.8684e-01 insignificant -5.0892e-02 8.8408e-02 insignificant 7.3228e-01 insignificant 0.758758 0.6963918 0.07511215 8 0.778693 0.675642 0.10305098 9.6653e-08 8.4536e-01 weaklyHypermeth 1.1932e-06 1.0000e+00 weaklyHypermeth 5.3062e-05 6.9479e-01 weaklyHypermeth 8.4226e-04 1.0000e+00 weaklyHypermeth 6.8874e-02 1.5293e-01 insignificant 8.2221e-01 insignificant 0.758758 0.7759079 -0.01355519 8 0.778693 0.795142 -0.01644848 8.4447e-01 3.8565e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.3706e-01 4.3994e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02419060 3.9651e-01 insignificant 1.0000e+00 insignificant 0.6963918 0.7759079 -0.08271460 8 0.675642 0.795142 -0.1194995 7.8286e-01 1.8253e-06 weaklyHypometh 1.0000e+00 3.4440e-05 weaklyHypometh 9.1761e-01 8.9835e-04 weaklyHypometh 1.0000e+00 1.4260e-02 weaklyHypometh -0.0930642 7.2763e-02 insignificant 0.50534882 insignificant chr22 28451596 28452596 56722 CABP7 ENSG00000100314 0.8510552 553 13 0.779604 477 12 0.687009 370 11 0.8172687 555 10 0.7941723 232 11 0.791787 766 12 0.827153 366 10 0.8524413 427 12 0.8330314 428 10 0.8490619 328 10 0.886810 574 12 0.775250 234 9 0.8956466 445 12 0.911634 235 7 0.839365 391 11 0.8327035 157 9 0.8979167 63 5 0.8306620 828 12 0.886350 440 12 0.739022 542 12 0.793034 172 10 0.8524697 189 10 0.855759 380 11 0.841265 263 10 0.8659483 244 10 0.9282878 670 12 0.884394 282 11 0.6774935 221 8 0.876942 536 12 0.8201332 778 12 0.805185 685 12 0.830975 574 10 0.7119859 445 12 0.6950207 363 12 0.5467944 739 12 0.9343823 51 4 0.6861617 385 12 0.7473162 790 12 0.824275 500 10 0.7440342 495 12 0.7529868 478 12 0.8427572 676 10 0.856300 478 12 0.9255813 0.840606 0.881865 0.9202859 0.8694812 0.9182022 0.8946949 0.8752687 0.8502507 0.9120514 0.908004 0.845484 0.9143067 0.944350 0.8914082 0.8149506 0.8962735 0.8556681 0.9042472 0.926737 0.839724 0.87700787 0.8930810 0.9340922 0.88424654 0.9338996 0.8520994 0.8745520 0.878511 0.926160 0.9147969 0.914184 0.7730137 0.6914889 0.6450863 0.8494733 0.8004451 0.7835764 0.9171092 0.8904664 0.8382964 0.8736620 0.8934456 7 0.882297 0.902683 -2.0052e-02 12 0.767754 0.782760 -0.0150059 0.90509465 3.1328e-03 weaklyHypometh 1.00000 2.2662e-01 insignificant 0.8306382 0.16743894 insignificant 1 1.00000 insignificant -0.00709342 0.7492186 insignificant 1.00000 insignificant 0.881776 0.7091303 0.12716568 12 0.759786 0.664822 0.09496435 1.1173e-18 4.0912e-01 weaklyHypermeth 2.6602e-17 1.0000e+00 weaklyHypermeth 5.6401e-08 4.3025e-01 weaklyHypermeth 1.5243e-06 1.0000e+00 weaklyHypermeth 1.0862e-01 8.8081e-02 insignificant 5.4709e-01 insignificant 0.882297 0.8722836 0.01853275 12 0.767754 0.790457 -0.02270320 1.1631e-03 5.0201e-01 weaklyHypermeth 1.9713e-02 1.0000e+00 weaklyHypermeth 6.2170e-02 7.4531e-01 insignificant 7.3141e-01 1.0000e+00 insignificant 2.4826e-02 3.8178e-01 insignificant 1.0000e+00 insignificant 0.902680 0.7091303 0.15067270 12 0.827916 0.664822 0.16309430 5.2236e-17 9.9986e-01 weaklyHypermeth 1.5829e-15 1.0000e+00 weaklyHypermeth 7.3328e-06 9.8209e-01 weaklyHypermeth 1.6295e-04 1.0000e+00 weaklyHypermeth 1.1571e-01 7.4840e-02 insignificant 4.7830e-01 insignificant 0.902683 0.8722836 0.03375205 12 0.782760 0.790457 -0.00769733 1.1368e-04 9.9930e-01 weaklyHypermeth 2.7980e-03 1.0000e+00 weaklyHypermeth 1.5773e-01 9.8797e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03191981 3.0550e-01 insignificant 1.0000e+00 insignificant 0.7089794 0.8716087 -0.11779373 12 0.644219 0.727957 -0.0837382 9.6708e-01 7.0893e-04 weaklyHypometh 1.0000e+00 7.3085e-03 weaklyHypometh 9.8886e-01 1.0847e-02 weaklyHypometh 1.0000e+00 1.0233e-01 insignificant -0.0837939 1.8021e-01 insignificant 0.85409379 insignificant chr22 28632496 28633496 56738 ENSG00000207455 0.6738386 339 6 0.563570 76 6 0.378154 111 6 0.7137236 185 6 0.6760913 48 6 0.726294 169 6 0.663596 108 6 0.6862374 52 6 0.4267917 59 6 0.5643697 72 6 0.742953 198 6 0.472641 97 5 0.6425408 64 6 NA 0 0 0.789069 62 6 0.5166667 31 6 0.6439394 59 5 0.7037696 188 5 0.698810 113 6 0.709306 253 6 0.768926 55 6 0.6533804 100 6 0.728107 158 6 0.803105 77 6 0.7345118 53 6 0.7912023 115 6 0.789270 64 6 0.5462963 55 6 0.602778 50 6 0.6796067 103 6 0.646928 96 6 0.618719 290 6 0.5916627 94 6 0.5610365 135 5 0.5265700 36 1 0.6813326 64 5 0.5904915 125 6 0.4016049 148 6 0.743019 296 6 0.7593367 271 6 0.8068266 219 6 0.6814243 245 6 0.725263 258 6 0.6824147 0.559334 0.365169 0.7275237 0.6966380 0.7275002 0.6723883 0.6730242 0.4268101 0.5715685 0.751227 0.439326 0.6665390 NA 0.7975962 0.5045226 0.6793056 0.6986140 0.6807968 0.721874 0.800256 0.63687966 0.7396768 0.8007839 0.74641389 0.8044013 0.7880497 0.5427136 0.602345 0.695790 0.6465952 0.610780 0.5894669 0.5805104 0.5553856 0.6606283 0.6109223 0.3650801 0.7517972 0.7598926 0.8094085 0.7158598 0.7279302 5 0.640543 0.695724 -3.2099e-02 6 0.657849 0.689740 -0.0318911 0.97969024 1.3778e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9979436 0.05424822 insignificant 1 1.00000 insignificant -0.06572559 0.0756928 insignificant 1.00000 insignificant 0.640543 0.5514950 0.10597044 6 0.657849 0.552875 0.10497442 5.8258e-04 9.9914e-01 weaklyHypermeth 3.8328e-03 1.0000e+00 weaklyHypermeth 3.5635e-02 9.9511e-01 weaklyHypermeth 2.2990e-01 1.0000e+00 insignificant 7.2394e-02 1.4485e-01 lowCoverage 7.6698e-01 lowCoverage 0.640543 0.7214895 -0.09115370 6 0.657849 0.744864 -0.08701507 9.9985e-01 5.3227e-03 weaklyHypometh 1.0000e+00 1.5655e-01 insignificant 9.9999e-01 6.7245e-04 weaklyHypometh 1.0000e+00 4.8032e-02 weaklyHypometh -1.1200e-01 3.4898e-03 weaklyHypometh 1.2266e-01 insignificant 0.695724 0.5514950 0.13880553 6 0.689740 0.552875 0.13686553 1.8052e-05 1.0000e+00 weaklyHypermeth 1.7192e-04 1.0000e+00 weaklyHypermeth 1.4458e-03 1.0000e+00 weaklyHypermeth 1.5716e-02 1.0000e+00 weaklyHypermeth 1.3812e-01 1.2851e-02 lowCoverage 1.2599e-01 lowCoverage 0.695724 0.7214895 -0.05882682 6 0.689740 0.744864 -0.05512396 9.8778e-01 1.1363e-02 weaklyHypometh 1.0000e+00 3.9183e-01 insignificant 9.8656e-01 3.9109e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.04627155 1.6984e-01 insignificant 1.0000e+00 insignificant 0.5514950 0.7214895 -0.19664614 6 0.552875 0.744864 -0.1919895 1.0000e+00 7.5882e-06 weaklyHypometh 1.0000e+00 1.1857e-04 weaklyHypometh 1.0000e+00 3.0263e-04 weaklyHypometh 1.0000e+00 6.1761e-03 weaklyHypometh -0.1843910 3.0309e-03 lowCoverage 0.04968723 lowCoverage chr22 28635196 28636196 56740 ENSG00000207455 0.6815027 133 5 0.704259 85 5 0.785882 49 5 0.8158333 67 5 0.7388889 36 3 0.855142 119 5 0.641667 16 1 0.6780206 112 5 0.6977778 57 5 0.9166667 34 5 0.881276 179 5 0.674603 20 2 0.8482787 74 5 0.840000 51 5 0.853295 57 5 0.6023810 25 2 0.5416667 14 0 0.9146822 93 5 0.666056 95 5 0.601074 107 5 0.777778 17 2 0.7202381 39 5 0.787576 72 5 0.692053 60 6 0.9027778 50 5 0.8664818 110 5 0.661376 47 2 0.4454545 31 2 0.759036 81 5 0.8013612 108 5 0.831905 71 5 0.736678 164 5 0.5869048 31 3 0.6587302 49 5 0.6959110 110 5 0.7500000 6 0 0.3408219 58 5 0.5049858 94 5 0.888435 89 5 0.8061988 97 5 0.8139234 99 5 0.8650000 69 5 0.892572 118 5 0.8220552 0.749010 0.776215 0.8418931 0.7536232 0.8447081 0.7266304 0.7602631 0.7444444 0.8976449 0.801958 0.793219 0.7896982 0.867391 0.8717140 0.6534679 0.6385870 0.9164243 0.7686236 0.851790 0.887681 0.86917702 0.7856390 0.7739986 0.89009662 0.8301799 0.7339545 0.7075099 0.787415 0.803495 0.8081004 0.835171 0.5871118 0.7384403 0.8099204 0.8297478 0.5001237 0.7667766 0.8607660 0.8358060 0.8010453 0.8581522 0.9240569 2 0.797611 0.800712 -9.8684e-03 5 0.706295 0.717103 -0.0108075 0.51841439 3.0671e-01 insignificant 1.00000 1.0000e+00 insignificant 0.7231707 0.48364555 insignificant 1 1.00000 insignificant -0.00161187 0.9700650 lowCoverage 1.00000 lowCoverage 0.797611 0.6878613 0.10837731 5 0.706295 0.579908 0.12638744 1.1151e-05 9.9776e-01 weaklyHypermeth 9.9563e-05 1.0000e+00 weaklyHypermeth 1.7164e-02 9.9962e-01 weaklyHypermeth 1.2087e-01 1.0000e+00 insignificant 1.5739e-01 4.9032e-02 lowCoverage 3.4774e-01 lowCoverage 0.799009 0.8432203 -0.05163517 5 0.721480 0.889518 -0.16803781 9.9900e-01 3.5041e-02 weaklyHypometh 1.0000e+00 5.9392e-01 insignificant 9.9960e-01 1.1377e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -1.0628e-01 2.9512e-03 lowCoverage 1.0991e-01 lowCoverage 0.797647 0.6839080 0.11859663 5 0.663682 0.463926 0.19975598 1.7670e-05 9.8155e-01 weaklyHypermeth 1.6991e-04 1.0000e+00 weaklyHypermeth 2.0279e-02 9.9937e-01 weaklyHypermeth 1.3254e-01 1.0000e+00 insignificant 1.5900e-01 5.0947e-02 lowCoverage 3.6010e-01 lowCoverage 0.811821 0.8432203 -0.03993260 5 0.799138 0.889518 -0.09038023 9.8898e-01 7.3915e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9504e-01 2.2607e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.10466642 1.6400e-02 lowCoverage 3.4894e-01 lowCoverage 0.6929825 0.8432203 -0.15781653 5 0.627038 0.889518 -0.2624806 1.0000e+00 1.1880e-03 weaklyHypometh 1.0000e+00 1.1423e-02 weaklyHypometh 1.0000e+00 9.7322e-03 weaklyHypometh 1.0000e+00 9.3579e-02 weaklyHypometh -0.2636671 6.2450e-03 lowCoverage 0.08554750 lowCoverage chr22 28936096 28937096 56758 ENSG00000218885 0.7361838 288 8 0.569693 197 8 0.539807 164 8 0.6963798 214 8 0.7076122 79 7 0.660456 278 8 0.746032 111 8 0.7188878 214 8 0.6716575 105 8 0.7727824 105 8 0.611568 192 8 0.603571 46 6 0.3713768 171 6 0.762088 43 4 0.604152 130 8 0.5666667 17 2 0.4497378 42 4 0.2654485 291 8 0.443727 167 8 0.611506 210 8 0.852908 74 8 0.5030904 151 6 0.720272 146 8 0.694056 65 8 0.6045159 380 8 0.6469377 263 8 0.639288 124 8 0.5866667 44 3 0.663467 184 8 0.6934763 333 8 0.640874 300 8 0.692836 230 8 0.9629870 192 8 0.9417196 173 8 0.7142857 103 4 0.6725146 259 7 0.9090161 114 9 0.8658670 322 8 0.464011 291 8 0.3883609 268 8 0.4276304 252 8 0.4706464 223 8 0.537167 248 8 0.7349877 0.648083 0.527855 0.7036071 0.6941349 0.6815631 0.7626170 0.7088676 0.6698593 0.7725339 0.712789 0.611111 0.4566611 0.597519 0.6619840 0.6283628 0.5884846 0.3231900 0.4610782 0.566603 0.883246 0.48725868 0.7262090 0.7217142 0.59429489 0.7423173 0.6478767 0.5170940 0.678340 0.694155 0.6449679 0.768055 0.9681800 0.9425705 0.9439020 0.6630661 0.9754094 0.8711324 0.4030846 0.3867103 0.4157212 0.4909824 0.5305912 5 0.618022 0.672624 -5.0771e-02 8 0.600748 0.666835 -0.0660869 0.94993885 2.2032e-02 weaklyHypometh 1.00000 5.1237e-01 insignificant 0.9920128 0.09706804 insignificant 1 1.00000 insignificant -0.05606570 0.1621685 insignificant 1.00000 insignificant 0.618099 0.8822012 -0.25655555 8 0.634082 0.745336 -0.11125408 1.0000e+00 4.8539e-15 hypomethylated 1.0000e+00 6.0674e-13 hypomethylated 1.0000e+00 1.4572e-12 hypomethylated 1.0000e+00 3.6431e-10 hypomethylated -2.3893e-01 2.6632e-03 weaklyHypometh 3.3712e-02 weaklyHypometh 0.617974 0.3985959 0.18308744 8 0.593424 0.496181 0.09724293 1.3207e-08 9.8475e-01 weaklyHypermeth 9.4074e-07 1.0000e+00 weaklyHypermeth 8.5970e-07 9.9428e-01 weaklyHypermeth 7.8155e-05 1.0000e+00 weaklyHypermeth 1.4790e-01 1.5463e-03 weaklyHypermeth 6.4430e-02 weaklyHypermeth 0.672481 0.8829604 -0.19979595 8 0.629817 0.828151 -0.19833391 1.0000e+00 1.7263e-11 weaklyHypometh 1.0000e+00 2.1579e-09 weaklyHypometh 1.0000e+00 1.0470e-07 weaklyHypometh 1.0000e+00 1.1633e-05 weaklyHypometh -1.8287e-01 1.2046e-02 weaklyHypometh 1.1927e-01 insignificant 0.672481 0.3985959 0.23913326 8 0.629817 0.496181 0.13363577 8.3599e-10 9.9562e-01 hypermethylated 7.5999e-08 1.0000e+00 hypermethylated 3.7222e-06 9.9976e-01 hypermethylated 3.8365e-04 1.0000e+00 hypermethylated 0.20396930 8.7321e-05 hypermethylated 2.1830e-02 hypermethylated 0.8829604 0.3985959 0.43314822 8 0.828151 0.496181 0.3319697 1.4208e-22 9.9959e-01 hypermethylated 7.1040e-20 1.0000e+00 hypermethylated 4.7842e-10 1.0000e+00 hypermethylated 1.1960e-07 1.0000e+00 hypermethylated 0.3868353 1.9273e-04 hypermethylated 0.00770918 hypermethylated chr22 28976196 28977196 56765 LIF ENSG00000128342 0.7262787 133 6 0.566877 280 7 0.616995 217 8 0.7063492 86 4 0.6509117 111 6 0.675936 174 8 0.696051 340 8 0.6815797 246 8 0.7497025 214 7 0.6214128 175 8 0.793210 230 8 0.714071 154 5 0.7266719 245 8 0.749373 48 4 0.554090 166 7 0.6595238 128 6 0.7765434 102 4 0.3903050 115 4 0.699562 290 8 0.743410 169 8 0.758929 101 8 0.6666667 28 2 0.685588 178 8 0.721497 88 8 0.5373377 50 5 0.7185384 288 8 0.592985 152 7 0.7416953 79 7 0.704691 227 8 0.7055343 286 8 0.636779 276 8 0.727076 160 8 0.2302141 252 8 0.2476175 260 8 0.3464482 173 5 0.2500000 10 0 0.3313898 119 7 0.2538426 339 8 0.641355 163 6 0.6340643 137 8 0.5525573 83 5 0.6124282 155 4 0.534323 101 6 0.7309581 0.621722 0.715504 0.8497403 0.7307360 0.7550969 0.7638083 0.7028289 0.7636989 0.6759642 0.804093 0.731284 0.7121964 0.727138 0.6572219 0.6802024 0.7374133 0.5066132 0.6994551 0.721755 0.787156 0.68703597 0.7673150 0.7184170 0.58921446 0.7423475 0.5944149 0.7733923 0.755237 0.702504 0.6562504 0.800991 0.3615668 0.3641831 0.3888758 0.4085356 0.4402354 0.4088030 0.6652299 0.6340715 0.6306840 0.6767138 0.5281394 1 0.698592 0.725562 -1.1732e-02 8 0.655811 0.673582 -0.0177701 0.93461319 2.6972e-01 insignificant 1.00000 1.0000e+00 insignificant 0.8694704 0.64037314 insignificant 1 1.00000 insignificant -0.00816708 0.7724660 insignificant 1.00000 insignificant 0.698592 0.3165655 0.43353209 8 0.655811 0.247610 0.40820143 1.2159e-45 9.9997e-01 hypermethylated 1.0133e-43 1.0000e+00 hypermethylated 3.9649e-12 9.9993e-01 hypermethylated 3.3040e-10 1.0000e+00 hypermethylated 3.9836e-01 1.8447e-10 hypermethylated 1.8447e-08 hypermethylated 0.698592 0.6056338 0.07104399 6 0.655811 0.611005 0.04480687 2.6908e-03 9.5924e-01 weaklyHypermeth 3.9283e-02 1.0000e+00 weaklyHypermeth 8.9782e-02 9.8168e-01 insignificant 9.6539e-01 1.0000e+00 insignificant 7.9997e-02 2.0207e-02 weaklyHypermeth 3.0616e-01 insignificant 0.725562 0.3165655 0.43712592 8 0.673582 0.247610 0.42597157 2.6493e-39 1.0000e+00 hypermethylated 2.9436e-37 1.0000e+00 hypermethylated 1.5196e-10 9.9999e-01 hypermethylated 1.0811e-08 1.0000e+00 hypermethylated 4.0652e-01 1.5832e-09 hypermethylated 3.1665e-07 hypermethylated 0.725562 0.6056338 0.08411228 6 0.673582 0.611005 0.06257701 1.6077e-03 9.8786e-01 weaklyHypermeth 2.7852e-02 1.0000e+00 weaklyHypermeth 1.8050e-01 9.8815e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.08816419 1.1706e-02 weaklyHypermeth 3.1698e-01 insignificant 0.3165655 0.6056338 -0.24618526 6 0.247610 0.611005 -0.3633946 9.9991e-01 3.9468e-10 hypomethylated 1.0000e+00 1.6445e-08 hypomethylated 9.9980e-01 1.6731e-04 hypomethylated 1.0000e+00 4.1828e-03 hypomethylated -0.3183602 2.6031e-06 hypomethylated 0.00065078 hypomethylated chr22 28982896 28983896 56766 LIF ENSG00000128342 0.7445205 207 14 0.499070 478 14 0.731141 377 14 0.7735300 155 9 0.7515692 173 13 0.604777 271 14 0.594238 282 11 0.6519874 353 14 0.6102537 398 14 0.6772583 320 14 0.764635 357 14 0.685138 229 14 0.5772041 508 14 0.433866 137 7 0.550425 328 14 0.8170261 221 12 0.4179122 139 8 0.7797207 185 8 0.377652 366 14 0.547136 294 14 0.601287 139 9 0.7286860 154 7 0.682164 206 14 0.653524 144 9 0.7197144 113 8 0.7972141 512 14 0.636543 178 14 0.5945462 97 9 0.694279 427 14 0.5448279 687 14 0.572999 501 14 0.649269 254 14 0.7572778 447 14 0.7953895 291 14 0.7175758 122 5 0.5510204 48 4 0.6022817 152 10 0.7858152 406 14 0.804592 102 13 0.8310802 192 14 0.7951887 152 9 0.7543943 100 8 0.713816 127 9 0.7533426 0.499972 0.721467 0.7691241 0.7560897 0.6651294 0.6341992 0.6374991 0.5655608 0.7738372 0.750501 0.692883 0.5537837 0.654899 0.6133499 0.8293504 0.3848514 0.7749834 0.4072566 0.569437 0.626251 0.71094781 0.7266272 0.6995842 0.71671414 0.8081471 0.6509622 0.5583503 0.684579 0.525116 0.5914764 0.704402 0.7729388 0.8290079 0.6897027 0.5968379 0.5719681 0.8071546 0.8135799 0.8276019 0.8118237 0.7804140 0.7394460 1 0.676012 0.718099 -2.5283e-02 14 0.561106 0.576763 -0.0156569 0.99342813 9.4943e-02 insignificant 1.00000 1.0000e+00 insignificant 0.9850413 0.56341346 insignificant 1 1.00000 insignificant -0.02680134 0.4609062 insignificant 1.00000 insignificant 0.676252 0.7978142 -0.07318435 14 0.589577 0.740522 -0.15094484 9.9989e-01 1.3501e-10 weaklyHypometh 1.0000e+00 1.0385e-08 weaklyHypometh 9.9695e-01 1.0682e-04 weaklyHypometh 1.0000e+00 7.1211e-03 weaklyHypometh -7.2107e-02 1.8443e-01 insignificant 9.0407e-01 insignificant 0.676838 0.7949480 -0.15963630 12 0.628882 0.800412 -0.17152953 1.0000e+00 3.8282e-10 weaklyHypometh 1.0000e+00 1.2761e-07 weaklyHypometh 9.9999e-01 6.8743e-07 weaklyHypometh 1.0000e+00 2.2914e-04 weaklyHypometh -1.5036e-01 4.4470e-04 weaklyHypometh 2.7943e-02 weaklyHypometh 0.718521 0.7967258 -0.03408890 14 0.640102 0.696962 -0.05686037 9.9386e-01 7.3177e-06 weaklyHypometh 1.0000e+00 5.2269e-04 weaklyHypometh 9.6197e-01 7.6466e-03 weaklyHypometh 1.0000e+00 4.3466e-01 insignificant -4.5306e-02 3.5998e-01 insignificant 1.0000e+00 insignificant 0.718860 0.7949480 -0.15299880 12 0.658782 0.800412 -0.14163012 9.9963e-01 3.4286e-08 weaklyHypometh 1.0000e+00 1.1429e-05 weaklyHypometh 9.9953e-01 1.4002e-05 weaklyHypometh 1.0000e+00 4.6675e-03 weaklyHypometh -0.12355983 1.2346e-03 weaklyHypometh 1.3916e-01 insignificant 0.7979452 0.7949480 -0.03520768 12 0.739890 0.800412 -0.0605217 5.8253e-01 4.2541e-02 weaklyHypometh 1.0000e+00 2.3766e-01 insignificant 9.6196e-01 3.2827e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0782541 1.3407e-01 insignificant 0.71704532 insignificant chr22 29002796 29003796 56767 OSM ENSG00000099985 0.7800631 221 6 0.737386 122 6 0.657585 93 6 0.7404682 136 6 0.7281025 44 5 0.799451 286 6 0.696195 95 6 0.7130698 98 5 0.6602742 105 6 0.6918600 66 6 0.764667 201 6 0.813973 66 5 0.7200264 96 6 0.562500 16 2 0.626225 101 6 0.7782828 60 5 0.8433918 61 5 0.7708400 131 6 0.696093 109 6 0.826392 210 6 0.651389 32 3 0.8306878 47 3 0.725384 116 6 0.808333 48 5 0.8611111 22 1 0.7300543 105 6 0.602446 52 3 0.9895833 35 2 0.658297 71 6 0.7025334 95 6 0.710955 94 6 0.733371 265 6 0.6556906 91 6 0.7313520 77 6 0.7091310 86 6 0.7708333 37 3 0.8275502 59 3 0.5287330 79 5 0.791444 167 6 0.8025503 177 6 0.7521691 153 6 0.8115202 160 6 0.774098 209 6 0.8674589 0.796769 0.751316 0.8327162 0.8131068 0.8633717 0.7945554 0.8214197 0.7650675 0.7687424 0.812020 0.885161 0.8137385 0.802556 0.7466474 0.8607504 0.8421262 0.8441321 0.7761205 0.884023 0.786458 0.89186508 0.8170535 0.8973214 0.80357143 0.8254901 0.7106941 0.9791667 0.756411 0.786271 0.8240775 0.826351 0.6861303 0.7711425 0.7678451 0.8772321 0.8305264 0.6469197 0.8820588 0.8925493 0.8322476 0.8729614 0.8125000 2 0.772551 0.764766 -4.2111e-04 6 0.738759 0.734959 0.0038003 0.71610683 7.1201e-01 insignificant 1.00000 1.0000e+00 insignificant 0.8432671 0.18706040 insignificant 1 1.00000 insignificant -0.02000309 0.5702964 lowCoverage 1.00000 lowCoverage 0.772551 0.6969697 0.06851962 6 0.738759 0.698243 0.04051618 7.0725e-04 8.9807e-01 weaklyHypermeth 4.5925e-03 1.0000e+00 weaklyHypermeth 2.3217e-02 5.7193e-01 weaklyHypermeth 1.5687e-01 1.0000e+00 insignificant 2.6461e-02 5.7741e-01 lowCoverage 1.0000e+00 lowCoverage 0.772551 0.8233256 -0.04235616 6 0.738759 0.783046 -0.04428667 9.9494e-01 3.1791e-02 weaklyHypometh 1.0000e+00 5.5774e-01 insignificant 9.9749e-01 3.2069e-02 weaklyHypometh 1.0000e+00 5.5934e-01 insignificant -5.6014e-02 7.9071e-03 weaklyHypometh 1.8811e-01 insignificant 0.764766 0.6969697 0.06933141 6 0.734959 0.698243 0.03671592 3.6783e-03 9.0161e-01 weaklyHypermeth 2.2566e-02 1.0000e+00 weaklyHypermeth 2.3713e-02 7.6869e-01 weaklyHypermeth 1.5200e-01 1.0000e+00 insignificant 4.6464e-02 3.9397e-01 lowCoverage 1.0000e+00 lowCoverage 0.764766 0.8233256 -0.04048832 6 0.734959 0.783046 -0.04808693 9.8046e-01 8.5044e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3197e-01 2.9847e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03601102 2.8753e-01 lowCoverage 1.0000e+00 lowCoverage 0.6969697 0.8233256 -0.10908491 6 0.698243 0.783046 -0.0848029 9.9641e-01 1.9316e-03 weaklyHypometh 1.0000e+00 1.6797e-02 weaklyHypometh 8.1717e-01 1.3566e-02 weaklyHypometh 1.0000e+00 1.2151e-01 insignificant -0.0824747 1.1043e-01 lowCoverage 0.64204436 lowCoverage chr22 29267996 29268996 56785 ENSG00000184043 0.0736500 981 38 0.064655 977 36 0.195365 1113 40 0.0983296 1015 38 0.0982731 1108 42 0.190177 1575 40 0.130039 1246 42 0.0889297 1243 41 0.0727475 1518 41 0.1249097 1780 40 0.138199 1373 43 0.097169 1236 42 0.0989543 1396 42 0.087900 914 26 0.136458 1696 43 0.0905827 1083 34 0.0834896 1737 18 0.0715632 1452 38 0.127524 1262 41 0.112757 1164 40 0.118558 597 37 0.0598488 607 25 0.118685 773 38 0.135802 589 36 0.0972220 631 29 0.0466476 1421 40 0.102419 1528 39 0.0916968 625 37 0.126477 1173 40 0.0689385 1362 40 0.098101 1239 39 0.197948 1288 40 0.0506205 1006 40 0.0862220 857 32 0.0528589 814 33 0.0288542 360 29 0.1069059 576 36 0.0209720 1396 40 0.133588 1317 37 0.0605424 1288 38 0.0692777 778 27 0.0477947 1194 35 0.055124 893 38 0.0619358 0.050680 0.125632 0.0557365 0.0517007 0.0914017 0.0860338 0.0592807 0.0516450 0.0641101 0.096139 0.051974 0.0534857 0.067283 0.0567651 0.0358504 0.0769754 0.0537087 0.0680333 0.060063 0.068703 0.03620218 0.0529243 0.0486939 0.05317405 0.0409834 0.0652615 0.0398816 0.082716 0.055853 0.0530757 0.121179 0.0473757 0.0377314 0.0387875 0.0320838 0.0524340 0.0196967 0.0500262 0.0328378 0.0221636 0.0327583 0.0501294 23 0.067799 0.070837 1.6394e-03 40 0.153685 0.129105 0.0245801 0.34136131 7.7219e-01 insignificant 1.00000 1.0000e+00 insignificant 0.0211244 0.98865631 weaklyHypermeth 1 1.00000 insignificant 0.00388845 0.7848626 insignificant 1.00000 insignificant 0.067186 0.0455272 0.03757568 40 0.110043 0.092410 0.01763305 1.6526e-07 9.9316e-01 weaklyHypermeth 1.7581e-06 1.0000e+00 weaklyHypermeth 2.5434e-07 9.9975e-01 weaklyHypermeth 6.3584e-06 1.0000e+00 weaklyHypermeth 5.1345e-02 1.0002e-02 weaklyHypermeth 9.6168e-02 weaklyHypermeth 0.066810 0.0497258 0.02660784 37 0.123863 0.084633 0.03922964 2.5400e-07 9.9990e-01 weaklyHypermeth 1.0583e-05 1.0000e+00 weaklyHypermeth 2.5441e-05 9.9998e-01 weaklyHypermeth 1.6110e-03 1.0000e+00 weaklyHypermeth 3.5818e-02 8.3408e-02 insignificant 7.1289e-01 insignificant 0.069860 0.0457268 0.03266402 40 0.127059 0.112818 0.01424112 1.4812e-04 9.9783e-01 weaklyHypermeth 1.2042e-03 1.0000e+00 weaklyHypermeth 4.7122e-03 9.9985e-01 weaklyHypermeth 4.1786e-02 1.0000e+00 weaklyHypermeth 4.7456e-02 2.0310e-02 weaklyHypermeth 1.8162e-01 insignificant 0.070413 0.0497258 0.02585500 37 0.126978 0.084633 0.04234436 2.7879e-05 9.9934e-01 weaklyHypermeth 8.7121e-04 1.0000e+00 weaklyHypermeth 5.0321e-02 9.9788e-01 insignificant 5.8277e-01 1.0000e+00 insignificant 0.03193003 1.3347e-01 insignificant 1.0000e+00 insignificant 0.0452716 0.0485615 0.00105379 37 0.082302 0.063153 0.0191482 8.2178e-01 1.0045e-01 insignificant 1.0000e+00 4.9001e-01 insignificant 9.8293e-01 3.3867e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0155263 4.7058e-01 insignificant 1.00000000 insignificant chr22 29688796 29689796 56799 ENSG00000218230 0.7520437 328 8 0.645613 336 8 0.657801 146 7 0.7144143 316 8 0.7926792 139 8 0.738728 413 8 0.654708 212 8 0.7464813 235 8 0.5705931 199 9 0.6915913 190 6 0.617029 458 9 0.620982 122 6 0.7359006 269 8 0.704575 138 6 0.673841 214 9 0.6829004 72 3 0.7048464 747 5 0.5572080 380 9 0.735082 192 8 0.781152 204 7 0.670823 125 9 0.6863937 116 7 0.723408 245 8 0.735381 194 6 0.5883637 132 8 0.7377647 357 8 0.605083 124 6 0.7173899 138 5 0.724700 246 9 0.7129701 318 8 0.614474 233 8 0.756858 309 8 0.6859700 305 8 0.6249007 162 8 0.5528824 329 8 0.6437500 48 4 0.5649226 221 10 0.7473855 271 8 0.770189 338 8 0.7524501 305 8 0.6353126 256 8 0.6268743 253 8 0.719127 376 8 0.7191135 0.687572 0.660047 0.6600493 0.7604229 0.7429306 0.6631343 0.7178306 0.6307954 0.6991187 0.676664 0.654881 0.6455792 0.749089 0.6892223 0.6831880 0.7418923 0.6113038 0.6940508 0.757008 0.628015 0.64067461 0.7013864 0.6777620 0.58515655 0.7121612 0.6717190 0.6587738 0.680484 0.712360 0.7156778 0.770976 0.6518155 0.6415934 0.7566136 0.5330544 0.6904931 0.6741582 0.7050379 0.7435173 0.6844417 0.7098965 0.6446209 4 0.718350 0.709385 2.2564e-02 8 0.645279 0.654389 -0.0091099 0.11390040 1.5234e-01 insignificant 1.00000 1.0000e+00 insignificant 0.4129871 0.22244796 insignificant 1 1.00000 insignificant -0.00055901 0.9799119 insignificant 1.00000 insignificant 0.718756 0.6549401 0.04538519 8 0.707779 0.606227 0.10155159 5.2955e-02 7.3066e-01 insignificant 2.5338e-01 1.0000e+00 insignificant 1.6761e-01 9.5988e-01 insignificant 8.3807e-01 1.0000e+00 insignificant 5.2273e-02 1.5811e-01 insignificant 8.1083e-01 insignificant 0.718597 0.7310209 0.02175503 8 0.649335 0.677640 -0.02830490 1.2289e-02 1.0713e-01 weaklyHypermeth 1.4806e-01 1.0000e+00 insignificant 4.6296e-01 2.7418e-02 inconclusive 1.0000e+00 5.3432e-01 insignificant -1.1882e-02 7.3100e-01 insignificant 1.0000e+00 insignificant 0.709550 0.6554307 0.01812749 8 0.668424 0.661339 0.00708527 6.7775e-02 6.9154e-01 insignificant 3.1090e-01 1.0000e+00 insignificant 1.2099e-01 9.0211e-01 insignificant 6.1416e-01 1.0000e+00 insignificant 5.2832e-02 1.6106e-01 insignificant 8.4324e-01 insignificant 0.711401 0.7310209 -0.00150971 8 0.722767 0.677640 0.04512699 1.8425e-02 2.0884e-01 inconclusive 1.9812e-01 1.0000e+00 insignificant 6.5067e-01 2.9302e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01132296 7.4892e-01 insignificant 1.0000e+00 insignificant 0.6556391 0.7310209 -0.01457710 8 0.667473 0.677640 -0.0101668 7.5166e-01 2.4948e-02 weaklyHypometh 1.0000e+00 1.5765e-01 insignificant 9.6932e-01 6.4976e-02 insignificant 1.0000e+00 4.1651e-01 insignificant -0.0641553 1.6301e-01 insignificant 0.79678660 insignificant chr22 29824396 29825396 56806 SMTN ENSG00000183963 0.2686531 457 20 0.141686 637 11 0.281277 380 12 0.4489491 652 20 0.1493949 331 11 0.358090 665 20 0.361407 190 11 0.3077230 400 12 0.2880370 241 11 0.1953735 368 11 0.336339 510 12 0.158582 322 9 0.2034380 402 11 0.262361 326 9 0.305410 363 11 0.0911262 386 11 0.1212121 43 3 0.3409196 738 20 0.228332 914 19 0.558793 362 16 0.212253 110 11 0.0766212 285 11 0.259876 324 12 0.013605 160 9 0.3531546 166 11 0.5677940 299 20 0.162748 520 11 0.2612795 69 8 0.102620 614 11 0.4498553 351 16 0.341703 394 20 0.351389 591 20 0.4364349 177 11 0.4849449 195 9 0.5674603 119 8 0.3947345 412 17 0.6717657 100 9 0.6616030 383 20 0.455623 453 19 0.2797613 570 20 0.3257555 539 19 0.5459760 697 18 0.289068 527 20 0.1106777 0.073562 0.268193 0.2593879 0.0855002 0.2376641 0.2472120 0.3073614 0.2352006 0.2123839 0.297101 0.153764 0.1218823 0.235757 0.2643051 0.1099414 0.1776625 0.2643210 0.0611470 0.350880 0.216445 0.07972099 0.1154420 0.0212940 0.33280838 0.4616858 0.1042408 0.2956866 0.121437 0.364177 0.2269860 0.170930 0.5083172 0.6081192 0.6302775 0.3644348 0.6450317 0.6995074 0.2700462 0.1863303 0.1698368 0.4184918 0.2097076 8 0.227817 0.212371 6.4176e-03 11 0.365620 0.323930 0.0416904 0.98926810 1.1840e-01 insignificant 1.00000 1.0000e+00 insignificant 0.8849008 0.68224825 insignificant 1 1.00000 insignificant 0.00761358 0.8877583 insignificant 1.00000 insignificant 0.227556 0.5513006 -0.31553099 13 0.332784 0.550725 -0.21794154 8.1150e-02 7.7150e-43 hypomethylated 3.5437e-01 1.9287e-40 hypomethylated 8.6393e-01 1.7808e-10 hypomethylated 1.0000e+00 2.5440e-08 hypomethylated -2.6580e-01 1.0859e-03 weaklyHypometh 1.5083e-02 weaklyHypometh 0.227734 0.3115578 -0.03695242 16 0.359274 0.427150 -0.06787651 5.2195e-01 1.1154e-05 weaklyHypometh 1.0000e+00 1.2393e-03 weaklyHypometh 6.0421e-01 1.5902e-02 weaklyHypometh 1.0000e+00 3.8125e-01 insignificant -1.0888e-01 1.0985e-01 insignificant 8.1368e-01 insignificant 0.212826 0.5512266 -0.32852573 11 0.342801 0.546667 -0.20386614 1.8424e-01 7.6958e-25 hypomethylated 7.2942e-01 2.5653e-22 hypomethylated 9.4854e-01 7.8039e-08 hypomethylated 1.0000e+00 9.7549e-06 hypomethylated -2.7342e-01 1.1273e-03 weaklyHypometh 1.6826e-02 weaklyHypometh 0.212678 0.3115578 -0.04147304 11 0.355456 0.427150 -0.07169461 1.2626e-01 3.4515e-02 weaklyHypometh 9.8642e-01 7.6424e-01 insignificant 1.8333e-01 3.1645e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.11649511 1.2524e-01 insignificant 1.0000e+00 insignificant 0.5514493 0.3110632 0.20225307 17 0.558334 0.369865 0.1884686 3.0571e-15 9.3814e-01 hypermethylated 6.1142e-13 1.0000e+00 hypermethylated 2.4305e-05 9.9475e-01 hypermethylated 3.4721e-03 1.0000e+00 hypermethylated 0.1569205 5.4516e-02 insignificant 0.42039861 insignificant chr22 30069996 30070996 56821 ENSG00000212542 0.4823209 529 17 0.457679 416 15 0.592726 566 19 0.6641630 351 17 0.5796953 317 14 0.774501 584 18 0.672613 341 17 0.3961567 595 19 0.5505692 600 17 0.6711066 522 17 0.678024 493 19 0.448518 369 18 0.5373112 511 17 0.578524 273 12 0.641885 520 17 0.5446663 266 12 0.4362155 275 10 0.5996590 614 18 0.217558 543 19 0.691708 449 19 0.571959 223 16 0.5366683 220 14 0.581936 395 17 0.538976 269 14 0.4948441 224 15 0.4721883 532 19 0.477780 490 19 0.4872691 280 17 0.496614 472 19 0.6548718 535 19 0.308178 618 19 0.708502 684 19 0.6968393 484 17 0.7644982 429 19 0.6553571 248 12 0.6222789 87 6 0.6995213 293 17 0.6018859 625 19 0.511602 389 17 0.6236520 374 18 0.6556439 276 14 0.6088405 324 15 0.617113 364 17 0.5454713 0.528151 0.701591 0.6728081 0.6490950 0.8424744 0.7514083 0.5589178 0.6484284 0.7725178 0.752977 0.523732 0.6011604 0.676920 0.6956039 0.5298159 0.4748619 0.7030945 0.3289969 0.734278 0.666464 0.63786059 0.7573653 0.6694160 0.48920838 0.5987975 0.5995765 0.6070605 0.615712 0.756642 0.4088780 0.806915 0.8133265 0.8328645 0.7437578 0.6691247 0.8355550 0.5974636 0.5856558 0.7184410 0.7332861 0.6647008 0.7865396 6 0.549814 0.586200 -9.6643e-04 19 0.539514 0.490640 0.0488740 0.76658129 9.5645e-01 insignificant 1.00000 1.0000e+00 insignificant 0.6647034 0.98704929 insignificant 1 1.00000 insignificant 0.03329784 0.4216210 insignificant 1.00000 insignificant 0.549847 0.6634349 -0.10219418 19 0.555182 0.656150 -0.10096760 7.1276e-01 2.0030e-14 weaklyHypometh 1.0000e+00 2.0030e-12 weaklyHypometh 9.4533e-01 3.0498e-09 weaklyHypometh 1.0000e+00 3.8122e-07 weaklyHypometh -1.1262e-01 7.3416e-03 weaklyHypometh 7.6475e-02 weaklyHypometh 0.549501 0.6664737 -0.04602883 17 0.547606 0.549221 -0.00161481 8.4909e-01 2.3666e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.2475e-01 1.9890e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -4.2590e-02 2.7336e-01 insignificant 1.0000e+00 insignificant 0.586912 0.6634349 -0.09618416 19 0.537368 0.656150 -0.11878195 8.7208e-01 5.3477e-11 weaklyHypometh 1.0000e+00 5.3477e-09 weaklyHypometh 9.8964e-01 7.0130e-09 weaklyHypometh 1.0000e+00 1.3772e-06 weaklyHypometh -1.4591e-01 1.4930e-03 weaklyHypometh 2.0538e-02 weaklyHypometh 0.586613 0.6664737 -0.04404431 17 0.503354 0.549221 -0.04586701 9.3103e-01 1.8633e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.2084e-01 1.4808e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.07588794 6.5413e-02 insignificant 7.8811e-01 insignificant 0.6637373 0.6678281 0.05092651 17 0.663957 0.566682 0.0972750 3.0658e-08 9.4844e-01 weaklyHypermeth 3.4064e-06 1.0000e+00 weaklyHypermeth 4.4493e-06 9.9873e-01 weaklyHypermeth 8.8986e-04 1.0000e+00 weaklyHypermeth 0.0700267 7.1873e-02 insignificant 0.50534882 insignificant chr22 30351496 30352496 56828 ENSG00000100141 0.3259108 390 13 0.207942 454 13 0.387378 361 13 0.3174630 481 13 0.3105289 234 13 0.579460 471 13 0.401533 221 13 0.3198104 338 13 0.3498925 476 13 0.4359668 599 13 0.426761 396 13 0.300211 314 13 0.2537429 587 13 0.299506 394 13 0.236942 652 13 0.2662239 326 13 0.2659262 117 8 0.3033563 517 13 0.287160 450 13 0.380439 262 13 0.458949 208 11 0.1725603 405 13 0.478280 262 13 0.196645 244 13 0.4545273 236 13 0.4104771 531 13 0.324442 249 12 0.3786659 256 12 0.430100 399 13 0.2992690 723 13 0.191823 608 13 0.460266 443 13 0.3207337 267 12 0.4807412 238 12 0.2655731 462 10 0.3673077 60 6 0.1960444 283 10 0.1266459 608 13 0.271071 376 13 0.3104650 369 13 0.1897834 392 13 0.2629846 391 13 0.348702 359 13 0.3346551 0.221328 0.401359 0.3371474 0.3188329 0.5409223 0.4092788 0.3180375 0.3351373 0.4796202 0.471580 0.302026 0.1504292 0.325396 0.2639942 0.2899521 0.3130914 0.3497270 0.2960338 0.427683 0.449507 0.18764934 0.4708911 0.2495680 0.42919443 0.4294005 0.3263780 0.3136151 0.397919 0.258367 0.2056570 0.474268 0.2069215 0.5263747 0.2248106 0.3592814 0.2272099 0.1156277 0.2406758 0.2648714 0.1935377 0.2763827 0.3074796 12 0.322512 0.330046 3.3388e-03 13 0.399821 0.383894 0.0159270 0.67715557 9.0043e-01 insignificant 1.00000 1.0000e+00 insignificant 0.8044221 0.53552573 insignificant 1 1.00000 insignificant -0.02185926 0.5742694 insignificant 1.00000 insignificant 0.322255 0.2327766 0.12114568 13 0.346451 0.256801 0.08965041 8.3528e-10 5.3955e-01 weaklyHypermeth 1.0848e-08 1.0000e+00 weaklyHypermeth 1.7144e-03 7.5707e-01 weaklyHypermeth 1.6328e-02 1.0000e+00 weaklyHypermeth 3.9967e-02 4.9168e-01 insignificant 1.0000e+00 insignificant 0.322296 0.2199258 0.07712361 13 0.368674 0.323978 0.04469611 3.7326e-04 9.9954e-01 weaklyHypermeth 7.6176e-03 1.0000e+00 weaklyHypermeth 3.4745e-04 9.9936e-01 weaklyHypermeth 1.2247e-02 1.0000e+00 weaklyHypermeth 5.6207e-02 1.2039e-01 insignificant 8.5385e-01 insignificant 0.329825 0.2325339 0.11943359 13 0.306880 0.240751 0.06612933 1.9887e-06 7.9215e-01 weaklyHypermeth 2.1616e-05 1.0000e+00 weaklyHypermeth 1.2945e-02 9.7092e-01 weaklyHypermeth 9.2463e-02 1.0000e+00 weaklyHypermeth 6.1826e-02 3.3800e-01 insignificant 1.0000e+00 insignificant 0.330187 0.2199258 0.07794907 13 0.380672 0.323978 0.05669476 2.8489e-03 9.9996e-01 weaklyHypermeth 4.5221e-02 1.0000e+00 weaklyHypermeth 7.0764e-04 9.9999e-01 weaklyHypermeth 2.3369e-02 1.0000e+00 weaklyHypermeth 0.07806590 8.7641e-02 insignificant 8.8900e-01 insignificant 0.2324974 0.2195122 -0.01798759 13 0.239430 0.275690 -0.0362606 5.4335e-01 4.7005e-03 weaklyHypometh 1.0000e+00 3.6438e-02 weaklyHypometh 7.6979e-01 2.3561e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0162399 7.8676e-01 insignificant 1.00000000 insignificant chr22 31258096 31259096 56865 FBXO7 ENSG00000100225 0.5777170 157 7 0.596768 255 8 0.733977 186 8 0.7761905 112 4 0.5870421 193 8 0.692649 309 7 0.635229 152 7 0.6524072 308 7 0.6726697 292 7 0.8699634 88 7 0.805833 215 8 0.570592 86 6 0.7994115 152 7 0.621853 108 4 0.644475 316 7 0.5637921 182 5 0.2571429 39 7 0.5874459 107 6 0.786198 177 7 0.788073 172 7 0.866667 78 5 0.5833333 59 4 0.730376 210 7 0.801197 94 8 0.8217857 77 6 0.8104827 248 8 0.440312 194 7 0.4860870 129 5 0.605614 185 7 0.6907042 359 9 0.700076 231 8 0.815915 248 7 0.2831480 277 10 0.4271178 119 7 0.0113636 35 2 0.1458541 87 8 0.3681733 156 7 0.1695632 253 10 0.751984 116 8 0.5134921 93 7 0.7592593 78 5 0.4702381 71 6 0.806199 106 7 0.6803285 0.389110 0.591314 0.6326790 0.4421783 0.4450378 0.6087985 0.5083421 0.4329241 0.8565815 0.704341 0.470656 0.7118277 0.580605 0.5431700 0.2950082 0.1183206 0.6574518 0.7004412 0.580822 0.790076 0.44604441 0.6674434 0.8143570 0.64416576 0.6553430 0.4669070 0.3868921 0.466242 0.475136 0.5314201 0.636853 0.4324374 0.6828110 0.0130118 0.1389145 0.4678105 0.3010657 0.7261905 0.4698292 0.6822519 0.4309569 0.6574411 4 0.553056 0.592979 -3.3174e-02 7 0.678769 0.662547 0.0162226 0.97651685 4.6136e-02 weaklyHypometh 1.00000 7.4368e-01 insignificant 0.9711555 0.21284403 insignificant 1 1.00000 insignificant -0.03507441 0.4923475 insignificant 1.00000 insignificant 0.552442 0.3128371 0.25699680 7 0.622205 0.258119 0.36408580 1.2842e-43 5.5224e-01 hypermethylated 9.1728e-42 1.0000e+00 hypermethylated 1.3621e-11 9.8644e-01 hypermethylated 1.0107e-09 1.0000e+00 hypermethylated 4.2677e-01 3.8635e-04 hypermethylated 7.1547e-03 hypermethylated 0.553085 0.6250000 -0.05595665 7 0.696646 0.690451 0.00619502 9.0415e-02 1.5787e-01 insignificant 8.0013e-01 1.0000e+00 insignificant 5.6590e-01 5.3729e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.3688e-04 9.9259e-01 insignificant 1.0000e+00 insignificant 0.592979 0.3131749 0.29737732 7 0.662547 0.281585 0.38096186 1.2589e-46 7.9753e-01 hypermethylated 2.5178e-44 1.0000e+00 hypermethylated 3.4438e-11 9.9644e-01 hypermethylated 3.1307e-09 1.0000e+00 hypermethylated 4.6184e-01 1.4778e-04 hypermethylated 3.4866e-03 hypermethylated 0.593261 0.6250000 -0.02817990 7 0.728801 0.690451 0.03835010 3.5962e-03 4.0862e-01 inconclusive 5.3674e-02 1.0000e+00 inconclusive 2.4286e-01 7.9717e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03581129 6.7029e-01 insignificant 1.0000e+00 insignificant 0.3127706 0.6250000 -0.26422741 7 0.259743 0.690451 -0.4307079 9.9678e-01 1.1276e-14 hypomethylated 1.0000e+00 5.6380e-13 hypomethylated 9.9985e-01 2.8975e-07 hypomethylated 1.0000e+00 1.8109e-05 hypomethylated -0.4260312 1.5884e-03 weaklyHypometh 0.03035429 weaklyHypometh chr22 31623696 31624696 56893 ENSG00000183531 0.8413747 273 7 0.815543 235 7 0.690321 143 7 0.8212763 174 7 0.7217402 98 7 0.785894 407 7 0.816246 112 7 0.7272634 150 7 0.8391852 98 5 0.8280612 125 5 0.723496 250 7 0.841270 68 6 0.8515886 178 7 0.638095 26 4 0.870026 121 7 0.6974790 47 4 0.8656566 32 4 0.8411008 128 7 0.670654 188 7 0.797227 285 7 0.762302 79 7 0.8209647 79 7 0.791409 169 7 0.807937 80 7 0.8264846 75 7 0.7116156 277 7 0.822473 93 7 0.7408754 81 5 0.841587 218 7 0.7564055 309 7 0.763212 274 7 0.744775 366 7 0.7135612 209 7 0.6449871 121 6 0.6596279 473 7 0.7341270 53 4 0.8116933 121 7 0.6343700 335 7 0.880206 198 7 0.7401503 239 7 0.8291717 180 7 0.7954417 190 7 0.852434 211 7 0.8808867 0.877912 0.846819 0.8621061 0.8094629 0.8037882 0.8441923 0.8869456 0.8958743 0.8937061 0.859498 0.882149 0.8856390 0.820209 0.8996934 0.8096271 0.7918724 0.8691906 0.8329802 0.829732 0.817647 0.88104109 0.8498199 0.8640710 0.84987262 0.7789187 0.8447271 0.8684103 0.869403 0.824181 0.8282210 0.840121 0.8051681 0.7319502 0.6617787 0.8152322 0.8277751 0.7605014 0.9126522 0.9146786 0.8984755 0.8662959 0.8880301 4 0.835245 0.834286 -7.2088e-05 7 0.737905 0.766627 -0.0287223 0.23089857 4.0546e-02 weaklyHypometh 1.00000 7.1743e-01 insignificant 0.3477390 0.21344124 insignificant 1 1.00000 insignificant 0.00167152 0.9340650 insignificant 1.00000 insignificant 0.835245 0.7606707 0.10775081 7 0.737905 0.680737 0.05716728 1.2365e-08 7.7928e-01 weaklyHypermeth 1.5080e-07 1.0000e+00 weaklyHypermeth 2.1807e-03 9.9785e-01 weaklyHypermeth 2.0007e-02 1.0000e+00 weaklyHypermeth 8.4447e-02 2.7338e-02 weaklyHypermeth 2.2593e-01 insignificant 0.835245 0.8742633 -0.04326376 7 0.737905 0.767333 -0.02942804 9.7948e-01 6.3914e-03 weaklyHypometh 1.0000e+00 1.7754e-01 insignificant 9.6634e-01 6.1716e-02 insignificant 1.0000e+00 8.2288e-01 insignificant -3.5306e-02 2.5938e-01 insignificant 1.0000e+00 insignificant 0.834286 0.7606707 0.10658201 7 0.766627 0.680737 0.08588954 5.8396e-05 9.5661e-01 weaklyHypermeth 5.0341e-04 1.0000e+00 weaklyHypermeth 8.7764e-03 9.9851e-01 weaklyHypermeth 6.6995e-02 1.0000e+00 weaklyHypermeth 8.2776e-02 2.8499e-02 weaklyHypermeth 2.3480e-01 insignificant 0.834286 0.8742633 -0.04008989 7 0.766627 0.767333 -0.00070578 6.4294e-01 1.7914e-02 weaklyHypometh 1.0000e+00 5.2894e-01 insignificant 8.2527e-01 1.2119e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.03697732 2.1970e-01 insignificant 1.0000e+00 insignificant 0.7606707 0.8742633 -0.14483853 7 0.680737 0.767333 -0.0865953 9.8340e-01 1.8304e-04 weaklyHypometh 1.0000e+00 2.1284e-03 weaklyHypometh 9.9987e-01 2.0630e-03 weaklyHypometh 1.0000e+00 2.8653e-02 weaklyHypometh -0.1197530 9.7878e-03 weaklyHypometh 0.12389561 insignificant chr22 31722996 31723996 56897 ENSG00000183531 0.7616902 122 8 0.636786 107 7 0.837121 41 5 0.7022771 119 8 0.6854167 45 3 0.733872 127 7 0.644626 73 8 0.7368257 94 7 0.7875000 33 2 0.8833333 50 7 0.755764 118 7 0.716667 32 5 0.5595752 83 7 0.754861 65 7 0.818601 45 7 0.4125000 19 1 0.9047619 24 1 0.6893760 356 6 0.866319 63 7 0.662500 53 7 0.757143 27 4 1.0000000 10 0 0.810934 102 8 0.788462 48 6 0.8813131 79 2 0.7338624 97 8 0.812698 27 2 0.8333333 27 2 0.715492 70 8 0.7805157 102 7 0.704938 73 7 0.714782 67 7 0.7507049 61 3 0.8593137 49 2 0.7606908 119 8 0.7142857 11 0 0.5332351 107 7 0.7348039 100 7 0.750379 85 8 0.7912564 65 3 0.7755231 149 8 0.7333689 78 3 0.692398 123 8 0.7656432 0.650882 0.733211 0.6946857 0.6482843 0.7974824 0.6240059 0.7639566 0.7404412 0.8651961 0.793052 0.666176 0.6769319 0.771364 0.8386029 0.3529412 0.9707584 0.5717934 0.9168709 0.739216 0.791176 0.96556740 0.8234306 0.9742647 0.84592246 0.7225490 0.8062092 0.9191176 0.654059 0.764195 0.7472222 0.763889 0.7799923 0.8302191 0.7670085 0.7500000 0.6508793 0.7520473 0.7534314 0.7788288 0.7787221 0.7029705 0.6896252 0 0.768446 0.791724 -3.1752e-02 7 0.772769 0.722395 0.0503746 0.99849221 2.7759e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9707524 0.09976488 insignificant 1 1.00000 insignificant -0.06693747 0.0688431 insignificant 1.00000 insignificant 0.767428 0.7516779 0.01421557 7 0.700046 0.585675 0.11437153 3.4621e-01 8.7667e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.8810e-01 6.8180e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.0130e-03 9.6917e-01 lowCoverage 1.0000e+00 lowCoverage 0.768256 0.7900000 -0.01615197 8 0.737558 0.748186 -0.01062845 7.4650e-01 2.1296e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.4834e-01 1.6534e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -2.1066e-02 5.0448e-01 insignificant 1.0000e+00 insignificant 0.793056 0.7533632 0.04628552 7 0.771816 0.650750 0.12106612 1.2092e-01 9.9348e-01 insignificant 5.0638e-01 1.0000e+00 insignificant 2.0664e-01 9.9113e-01 insignificant 9.2662e-01 1.0000e+00 insignificant 6.8950e-02 2.0324e-01 lowCoverage 9.7244e-01 lowCoverage 0.793296 0.7900000 0.02689176 7 0.774543 0.748186 0.02635653 2.9011e-01 6.2565e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.2334e-01 8.3688e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.04587120 1.4468e-01 insignificant 1.0000e+00 insignificant 0.7550562 0.7900000 -0.02035392 7 0.732093 0.748186 -0.0160929 7.4274e-01 1.7073e-01 insignificant 1.0000e+00 7.6217e-01 insignificant 7.6410e-01 2.6565e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0230793 6.3855e-01 lowCoverage 1.00000000 lowCoverage chr22 34101596 34102596 56913 TOM1 ENSG00000100284 0.5839573 211 6 0.584729 131 6 0.481508 151 6 0.5214604 147 6 0.5954106 108 6 0.487735 281 6 0.611226 135 6 0.5606945 106 6 0.5244223 104 6 0.6769806 118 6 0.558870 224 6 0.569765 95 6 0.6165381 107 6 NA 0 0 0.553066 158 6 0.5439153 91 6 0.5703167 164 6 0.5712431 171 6 0.572058 188 6 0.509437 214 6 0.618785 68 6 0.5006410 83 6 0.595817 137 6 0.564045 74 6 0.6944444 37 3 0.5640297 190 6 0.489484 56 6 0.6230159 61 6 0.584053 120 6 0.5930425 233 6 0.588674 210 6 0.559022 300 6 0.5114237 90 6 0.6379509 92 6 0.4475048 175 6 0.4537037 84 6 0.6418803 75 6 0.5884564 194 6 0.540710 201 6 0.4914736 154 6 0.5080321 162 6 0.5395726 195 6 0.509347 203 6 0.6057583 0.613127 0.512723 0.5419660 0.6460778 0.4993202 0.6320295 0.5828334 0.5550026 0.7168205 0.585021 0.596426 0.6455416 NA 0.5781590 0.5921321 0.6021370 0.5903826 0.6062112 0.523255 0.651032 0.51723986 0.6100198 0.5809239 0.72916667 0.5811052 0.5207194 0.6453557 0.604352 0.599518 0.6009990 0.568546 0.5337991 0.6513982 0.4836408 0.4662209 0.6671811 0.5854082 0.5637166 0.5129729 0.5260537 0.5614261 0.5218495 6 0.582300 0.592097 -7.3698e-03 6 0.562538 0.576777 -0.0142395 0.36634134 4.3281e-03 weaklyHypometh 1.00000 2.5832e-01 insignificant 0.5221455 0.00321327 weaklyHypometh 1 0.35703 insignificant -0.01844745 0.3421426 insignificant 1.00000 insignificant 0.582300 0.5577465 0.03403461 6 0.562538 0.537464 0.02507333 5.3223e-02 7.5501e-01 insignificant 2.5344e-01 1.0000e+00 insignificant 1.5222e-01 8.2369e-01 insignificant 7.7161e-01 1.0000e+00 insignificant 1.5987e-02 6.8537e-01 insignificant 1.0000e+00 insignificant 0.582300 0.5224044 0.04635244 6 0.562538 0.519486 0.04305194 5.1782e-02 6.1267e-01 insignificant 4.9317e-01 1.0000e+00 insignificant 2.1306e-02 7.3966e-01 weaklyHypermeth 3.2281e-01 1.0000e+00 insignificant 4.4980e-02 7.0506e-03 weaklyHypermeth 1.8078e-01 insignificant 0.592097 0.5577465 0.03945776 6 0.576777 0.537464 0.03931281 9.2064e-03 8.5547e-01 weaklyHypermeth 5.2014e-02 1.0000e+00 weaklyHypermeth 3.2704e-02 7.3692e-01 weaklyHypermeth 1.9820e-01 1.0000e+00 insignificant 3.4434e-02 4.0960e-01 insignificant 1.0000e+00 insignificant 0.592097 0.5224044 0.05376960 6 0.576777 0.519486 0.05729142 8.8529e-03 9.6685e-01 weaklyHypermeth 1.0831e-01 1.0000e+00 insignificant 4.2724e-03 9.9968e-01 weaklyHypermeth 9.7101e-02 1.0000e+00 weaklyHypermeth 0.06342733 3.5843e-03 weaklyHypermeth 1.8582e-01 insignificant 0.5577465 0.5224044 0.01217448 6 0.537464 0.519486 0.0179786 9.0980e-02 1.6390e-01 insignificant 1.0000e+00 7.4434e-01 insignificant 1.6016e-01 3.7147e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.0289928 4.6753e-01 insignificant 1.00000000 insignificant chr22 34172696 34173696 56917 MCM5 ENSG00000100297 0.8619124 432 12 0.850874 460 12 0.821078 592 14 0.9334448 343 12 0.8323330 343 10 0.934877 445 11 0.919588 403 14 0.8717955 415 14 0.8182491 297 12 0.9263728 548 14 0.933990 358 12 0.790151 279 12 0.8572600 462 12 0.784316 165 8 0.943017 528 12 0.9317731 292 12 0.9922884 112 5 0.8333441 383 12 0.942824 581 14 0.815705 289 10 0.889694 204 12 0.9250747 168 11 0.933893 439 14 0.851397 278 10 0.9492674 147 11 0.8562840 660 14 0.853218 438 14 0.9093082 237 12 0.820397 605 14 0.9112062 644 12 0.940737 596 12 0.938451 369 12 0.9256834 472 14 0.8176219 285 12 0.8888889 346 6 0.9600400 98 8 0.7061934 230 11 0.9008916 533 12 0.912816 394 12 0.9412022 440 12 0.9507603 306 12 0.8295325 380 12 0.941448 381 12 0.9367319 0.900264 0.889627 0.9504874 0.9615553 0.9070119 0.9346731 0.9367994 0.9217023 0.9367393 0.929205 0.904153 0.9342404 0.906422 0.9515657 0.9293378 0.9928739 0.9176325 0.9374660 0.940446 0.941613 0.91290795 0.9252717 0.9131388 0.95269772 0.9421214 0.9516260 0.8802999 0.928307 0.936704 0.9458741 0.940636 0.9319308 0.8434676 0.9806926 0.9378074 0.9502672 0.9784377 0.9419066 0.9560446 0.9750494 0.9477730 0.9614452 9 0.922599 0.928945 -9.9286e-03 14 0.841634 0.819498 0.0221356 0.72599049 2.1815e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9184271 0.39169509 insignificant 1 1.00000 insignificant -0.01848428 0.3246934 insignificant 1.00000 insignificant 0.922589 0.9383910 -0.01482760 12 0.832318 0.812084 0.02023423 9.8711e-01 6.6746e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9958e-01 4.0668e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 1.3206e-02 7.5083e-01 insignificant 1.0000e+00 insignificant 0.923552 0.9300368 -0.02120970 12 0.852743 0.867404 -0.01466056 9.9976e-01 1.2429e-02 weaklyHypometh 1.0000e+00 2.7619e-01 insignificant 9.9676e-01 4.1085e-02 weaklyHypometh 1.0000e+00 6.5844e-01 insignificant -3.5392e-02 2.1640e-01 insignificant 1.0000e+00 insignificant 0.928930 0.9383910 -0.00395356 12 0.808880 0.812084 -0.00320341 8.7232e-01 2.4469e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4819e-01 1.4389e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.1691e-02 4.5169e-01 insignificant 1.0000e+00 insignificant 0.933113 0.9300368 -0.00842768 12 0.844611 0.867404 -0.02279333 7.7122e-01 2.0370e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.1242e-01 2.2566e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01690791 5.3062e-01 insignificant 1.0000e+00 insignificant 0.9405992 0.9300368 -0.00416363 12 0.866204 0.867404 -0.0012003 7.2382e-01 9.5691e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.5112e-01 9.9419e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0485986 2.9744e-01 insignificant 1.00000000 insignificant chr22 34452996 34453996 56928 APOL5 ENSG00000128313 0.9564394 98 6 0.915256 191 8 0.955214 168 6 0.8383274 84 2 0.9243869 171 6 0.922223 131 6 0.920528 198 8 0.9549756 130 6 0.8979506 145 6 0.8963057 106 6 0.922164 315 8 0.885650 152 4 0.9399460 98 6 0.964286 24 2 0.933476 153 6 0.9970238 176 4 0.9221429 77 4 0.9152174 89 5 0.952658 149 6 0.961141 108 5 0.790123 78 6 0.3894737 24 1 0.887632 106 6 0.673452 53 4 0.8571429 19 1 0.8576514 124 6 0.920635 86 6 0.8212621 65 6 0.872035 97 6 0.9513815 166 8 0.916587 141 6 0.958578 105 6 0.7663556 150 6 0.8074931 138 6 0.8535714 192 7 0.8000000 5 0 0.8447038 179 6 0.8467271 151 6 0.937092 72 2 0.9827431 89 4 0.9954955 55 2 0.9505495 64 5 0.970560 57 2 0.9207497 0.869270 0.901993 0.8489185 0.9557569 0.9314098 0.8651592 0.9306527 0.9423582 0.8798482 0.908356 0.775707 0.9388506 0.966287 0.9236603 0.9976809 0.8973974 0.9042914 0.9552651 0.954504 0.841270 0.51930840 0.8322769 0.8876562 0.99775372 0.8888379 0.8723974 0.9396588 0.908636 0.914485 0.9262544 0.949135 0.7526200 0.7668479 0.7896031 0.8188155 0.6944545 0.7414442 0.9091546 0.9688655 0.9891190 0.9514771 0.9430063 1 0.932584 0.899436 2.1547e-02 6 0.902699 0.747203 0.1554958 0.16120077 9.9914e-01 insignificant 1.00000 1.0000e+00 insignificant 0.1179779 0.99208535 insignificant 1 1.00000 insignificant 0.10410254 0.0442411 weaklyHypermeth 1.00000 insignificant 0.932682 0.7693252 0.14918267 6 0.910807 0.753397 0.15741000 6.6894e-08 9.4558e-01 weaklyHypermeth 7.5162e-07 1.0000e+00 weaklyHypermeth 4.8433e-01 9.4751e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.0896e-01 1.1573e-04 weaklyHypermeth 2.5159e-03 weaklyHypermeth 0.933285 0.9406528 -0.02749845 2 0.935655 0.968289 -0.03263392 9.8157e-01 3.9719e-03 lowCoverage 1.0000e+00 1.2812e-01 lowCoverage 9.9994e-01 3.2354e-03 lowCoverage 1.0000e+00 1.1983e-01 lowCoverage -3.8522e-02 1.6667e-02 lowCoverage 2.6468e-01 lowCoverage 0.899436 0.7690418 0.18323945 6 0.747203 0.730979 0.01622422 2.0060e-04 5.8854e-01 weaklyHypermeth 1.6177e-03 1.0000e+00 weaklyHypermeth 7.9274e-01 5.7173e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.8544e-03 9.2037e-01 insignificant 1.0000e+00 insignificant 0.902554 0.9406528 -0.04323776 2 0.902404 0.968289 -0.06588506 9.9853e-01 1.0501e-02 lowCoverage 1.0000e+00 3.7504e-01 lowCoverage 9.9999e-01 5.3804e-03 lowCoverage 1.0000e+00 4.4837e-01 lowCoverage -0.14262494 9.9388e-03 lowCoverage 3.0118e-01 lowCoverage 0.7703704 0.9406528 -0.31509769 2 0.817596 0.968289 -0.1506934 9.9887e-01 2.1255e-04 lowCoverage 1.0000e+00 2.4153e-03 lowCoverage 9.9999e-01 3.4505e-02 lowCoverage 1.0000e+00 2.4824e-01 lowCoverage -0.1474794 1.7578e-05 lowCoverage 0.00159797 lowCoverage chr22 34791096 34792096 56952 RBM9 ENSG00000100320 0.0111806 824 19 0.056148 821 19 0.021542 1122 19 0.0134098 784 15 0.0099204 742 19 0.027335 1194 19 0.017943 1109 19 0.0117954 936 19 0.0536341 1505 19 0.0086326 1541 19 0.047491 766 19 0.015287 1150 19 0.0086987 1232 19 0.013027 629 14 0.016022 1464 19 0.0109954 1123 19 0.0046693 949 19 0.0532126 1031 17 0.019036 573 19 0.082940 940 19 0.020833 265 19 0.0020323 598 17 0.024279 832 19 0.038548 576 19 0.0018975 355 14 0.0051459 1101 19 0.064402 650 20 0.0285934 326 17 0.057862 820 19 0.0313689 1204 19 0.016591 1103 19 0.070707 1025 19 0.0012531 899 19 0.0034954 532 19 0.0014065 429 7 0.0000000 235 19 0.0530287 424 20 0.0008772 1008 19 0.021425 1063 19 0.0052207 807 19 0.0030490 798 17 0.0078470 849 19 0.057259 816 19 0.0185077 0.014455 0.028909 0.0207254 0.0188678 0.0316789 0.0254185 0.0169756 0.0098111 0.0144600 0.038007 0.021562 0.0135436 0.016701 0.0221664 0.0157660 0.0094159 0.0137645 0.0271679 0.014547 0.000000 0.00353224 0.0336804 0.0285542 0.00303077 0.0082159 0.0095745 0.0094145 0.017317 0.011097 0.0208019 0.035564 0.0021783 0.0047979 0.0015500 0.0000000 0.0104891 0.0015248 0.0036088 0.0075216 0.0047731 0.0071435 0.0091983 15 0.016003 0.016262 8.4002e-04 19 0.049898 0.044453 0.0054453 0.23570215 9.5583e-01 insignificant 1.00000 1.0000e+00 insignificant 0.2121311 0.99089833 insignificant 1 1.00000 insignificant -0.00504233 0.5525181 insignificant 1.00000 insignificant 0.016004 0.0048200 0.01133025 19 0.051977 0.048411 0.00356578 3.5823e-04 9.9960e-01 weaklyHypermeth 2.4369e-03 1.0000e+00 weaklyHypermeth 7.9590e-04 9.9997e-01 weaklyHypermeth 8.1214e-03 1.0000e+00 weaklyHypermeth 1.5136e-02 1.6172e-01 insignificant 8.1676e-01 insignificant 0.015967 0.0092315 0.01267908 19 0.047497 0.046831 0.00066673 2.8340e-03 8.1078e-01 weaklyHypermeth 4.0486e-02 1.0000e+00 weaklyHypermeth 3.1357e-03 9.8346e-01 weaklyHypermeth 6.3993e-02 1.0000e+00 weaklyHypermeth 6.1859e-03 6.0012e-01 insignificant 1.0000e+00 insignificant 0.016266 0.0048200 0.01018784 19 0.046305 0.048411 -0.00210637 7.9616e-02 9.9676e-01 insignificant 3.5228e-01 1.0000e+00 insignificant 2.5829e-01 9.9966e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.0178e-02 9.3211e-02 insignificant 5.6151e-01 insignificant 0.016173 0.0092315 0.01003775 19 0.041015 0.046831 -0.00581572 1.3233e-01 9.1683e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.1692e-01 9.6711e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01122827 3.8443e-01 insignificant 1.0000e+00 insignificant 0.0048254 0.0092315 -0.00214063 19 0.055327 0.046831 0.0084963 9.4273e-01 4.5903e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8956e-01 6.5619e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0089500 5.1825e-01 insignificant 1.00000000 insignificant chr22 34849796 34850796 56956 ENSG00000209425 0.1660072 962 20 0.182613 736 20 0.135757 567 20 0.1513063 946 20 0.2306276 379 20 0.199769 1160 20 0.154162 575 20 0.1789983 595 20 0.1538314 487 18 0.1711319 439 17 0.179730 711 20 0.137790 383 18 0.1994528 480 10 0.229345 157 13 0.168933 491 18 0.0926257 277 18 0.1807333 351 9 0.1722503 1180 20 0.156984 472 20 0.167285 926 20 0.232017 249 15 0.1560792 382 12 0.140144 641 18 0.175776 336 17 0.1727884 825 20 0.1500262 981 20 0.213416 322 14 0.2677143 200 14 0.163886 515 20 0.1599970 861 20 0.188355 827 20 0.216231 1123 20 0.0528380 655 18 0.0566481 524 20 0.1316493 477 10 0.1166667 588 17 0.0837041 352 19 0.1418618 917 20 0.156301 1266 20 0.1796314 986 20 0.1371720 913 20 0.0866264 883 20 0.123763 968 20 0.1571637 0.120470 0.130720 0.1308168 0.1220151 0.1662520 0.1455093 0.1574890 0.1237141 0.1395196 0.163947 0.093996 0.1491691 0.137389 0.1392188 0.1107641 0.0729383 0.1259025 0.1265425 0.118533 0.216922 0.09614300 0.1509983 0.1677389 0.12006674 0.1375092 0.1552612 0.1346790 0.167368 0.136934 0.1487828 0.145315 0.0296056 0.0340736 0.0525593 0.0661479 0.0525541 0.0580818 0.1165622 0.1118474 0.1028857 0.0642997 0.0920242 11 0.120916 0.140890 -6.3963e-03 20 0.180125 0.154393 0.0257319 0.90901480 9.9169e-01 insignificant 1.00000 1.0000e+00 insignificant 0.9386117 0.92478329 insignificant 1 1.00000 insignificant -0.01590251 0.2393893 insignificant 1.00000 insignificant 0.120636 0.0452605 0.08360989 20 0.158279 0.122235 0.03604411 2.9398e-20 1.0000e+00 weaklyHypermeth 8.1661e-19 1.0000e+00 weaklyHypermeth 5.4302e-08 1.0000e+00 weaklyHypermeth 1.5084e-06 1.0000e+00 weaklyHypermeth 7.3239e-02 3.5526e-03 weaklyHypermeth 4.2803e-02 weaklyHypermeth 0.120930 0.0697767 0.03490922 20 0.198129 0.126427 0.07170170 2.1263e-04 9.9994e-01 weaklyHypermeth 4.7252e-03 1.0000e+00 weaklyHypermeth 1.6684e-02 9.9928e-01 weaklyHypermeth 2.6909e-01 1.0000e+00 insignificant 3.3768e-02 9.8922e-02 insignificant 7.8509e-01 insignificant 0.140985 0.0452605 0.08894531 20 0.165763 0.122235 0.04352839 1.9338e-15 1.0000e+00 weaklyHypermeth 4.9583e-14 1.0000e+00 weaklyHypermeth 1.9249e-05 1.0000e+00 weaklyHypermeth 3.8499e-04 1.0000e+00 weaklyHypermeth 8.9141e-02 8.8599e-04 weaklyHypermeth 1.3631e-02 weaklyHypermeth 0.141142 0.0697767 0.04091684 20 0.194670 0.126427 0.06824259 8.8814e-03 9.9986e-01 weaklyHypermeth 1.0831e-01 1.0000e+00 insignificant 9.5440e-02 9.9993e-01 insignificant 9.8391e-01 1.0000e+00 insignificant 0.04967034 3.1307e-02 weaklyHypermeth 5.5906e-01 insignificant 0.0450271 0.0698045 -0.05027255 20 0.116176 0.132174 -0.0159983 1.0000e+00 8.5271e-06 weaklyHypometh 1.0000e+00 1.3119e-04 weaklyHypometh 1.0000e+00 1.4418e-02 weaklyHypometh 1.0000e+00 1.2323e-01 insignificant -0.0394708 1.0875e-01 insignificant 0.64204436 insignificant chr22 35059396 35060396 56973 APOL1 ENSG00000100342 0.7456305 124 5 0.900000 12 0 0.493889 45 5 0.7380952 34 5 0.9333333 10 1 0.825236 114 5 0.880000 17 1 0.8414863 75 5 0.7722222 42 5 0.6722222 42 5 0.812418 154 5 0.717143 25 3 0.8245238 80 5 NA 0 0 0.716667 43 5 0.6500000 17 0 0.5800000 22 4 0.7865135 62 5 0.713636 59 5 0.784499 83 5 0.617655 71 5 0.7609524 44 5 0.795489 97 5 0.950000 23 1 0.8571429 35 5 0.8478431 93 5 0.769722 76 5 0.8500000 9 0 0.769049 67 5 0.6296491 94 5 0.720758 108 5 0.891962 214 5 0.9351648 111 5 0.6555556 90 5 0.4761905 22 1 0.9047619 55 5 0.7666667 31 4 0.8644196 125 5 0.800897 75 5 0.8000000 70 5 0.8743590 56 5 0.8190476 102 5 0.856177 61 5 0.7267228 0.833333 0.484744 0.7237339 0.8888889 0.8112342 0.8000000 0.8211909 0.7008377 0.6851852 0.802135 0.642857 0.8191610 NA 0.6856261 0.6296296 0.4777778 0.7749552 0.7277537 0.732573 0.624204 0.72486772 0.8151331 0.9166667 0.80952381 0.8170557 0.7527557 0.8373016 0.745118 0.632309 0.7002405 0.881433 0.9372929 0.5687831 0.7165157 0.8968254 0.7989418 0.8612610 0.7880189 0.7947090 0.8650794 0.8042328 0.8636734 0 0.765094 0.779807 -1.7874e-02 5 0.763959 0.783075 -0.0191158 0.81252220 2.7170e-01 insignificant 1.00000 1.0000e+00 insignificant 0.8897691 0.25261647 insignificant 1 1.00000 insignificant -0.03111426 0.4216343 lowCoverage 1.00000 lowCoverage 0.765094 0.8387097 -0.07658510 5 0.763959 0.840086 -0.07612618 9.2201e-01 1.1095e-03 weaklyHypometh 1.0000e+00 4.6230e-02 weaklyHypometh 9.4138e-01 1.0663e-02 weaklyHypometh 1.0000e+00 4.2654e-01 insignificant -9.8889e-03 9.0030e-01 lowCoverage 1.0000e+00 lowCoverage 0.765094 0.8241758 -0.06148598 5 0.763959 0.825147 -0.06118724 6.9460e-01 8.9864e-04 weaklyHypometh 1.0000e+00 4.4932e-02 weaklyHypometh 8.0322e-01 1.4855e-03 weaklyHypometh 1.0000e+00 7.6957e-02 weaklyHypometh -7.2859e-02 2.0695e-02 lowCoverage 3.0888e-01 lowCoverage 0.779807 0.8387097 -0.05865543 5 0.783075 0.840086 -0.05701042 8.5546e-01 1.1192e-02 weaklyHypometh 1.0000e+00 5.0875e-01 insignificant 8.8372e-01 4.4925e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 2.1225e-02 7.9157e-01 lowCoverage 1.0000e+00 lowCoverage 0.779807 0.8241758 -0.04055857 5 0.783075 0.825147 -0.04207149 5.6746e-01 6.4317e-03 weaklyHypometh 1.0000e+00 3.3851e-01 insignificant 6.6456e-01 2.2877e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.04174439 2.1836e-01 lowCoverage 1.0000e+00 lowCoverage 0.8387097 0.8241758 0.01513911 5 0.840086 0.825147 0.0149389 6.0272e-01 8.2715e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.9239e-01 9.3200e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0629697 4.2564e-01 lowCoverage 1.00000000 lowCoverage chr22 35061196 35062196 56974 APOL1 ENSG00000100342 0.7777383 503 6 0.849544 177 6 0.760230 157 6 0.8054224 360 6 0.8923829 87 6 0.891475 415 6 0.826458 99 6 0.8753676 157 6 0.8346918 93 6 0.8403307 141 6 0.829639 270 6 0.901525 65 5 0.6539811 180 6 0.875000 60 4 0.726567 155 6 0.5329087 78 6 0.8533471 50 3 0.4663231 991 6 0.816989 284 6 0.733976 328 6 0.903333 124 5 0.4146345 172 6 0.772213 206 6 0.962963 50 5 0.7004680 237 6 0.8357454 229 6 0.832493 144 6 0.7508080 94 6 0.796380 258 6 0.7570582 270 6 0.663232 215 6 0.902757 305 6 0.2345940 226 6 0.4387976 347 6 0.3185654 174 2 0.1666667 97 6 0.4699054 109 6 0.2099969 414 6 0.393120 458 6 0.5270552 456 6 0.4016874 417 6 0.5442026 585 6 0.289237 436 6 0.7696683 0.775964 0.756411 0.7524153 0.8743596 0.8677636 0.8226636 0.8699025 0.8456860 0.8269866 0.810326 0.856163 0.6402448 0.821868 0.7188501 0.5417254 0.8290451 0.4288142 0.7962294 0.695110 0.910353 0.37494067 0.8711485 0.9537309 0.79437265 0.8188992 0.8123605 0.8039683 0.755931 0.752852 0.6331930 0.886823 0.1434450 0.3530675 0.2513456 0.0615836 0.4513141 0.1059640 0.3223518 0.4534565 0.3510904 0.4871446 0.2653635 5 0.710690 0.769765 -6.1536e-02 6 0.763487 0.766729 -0.0032421 0.91145109 6.9519e-02 insignificant 1.00000 9.0284e-01 insignificant 0.5497418 0.54839357 insignificant 1 1.00000 insignificant 0.01285435 0.7951901 insignificant 1.00000 insignificant 0.710753 0.2884334 0.41599742 6 0.793051 0.391833 0.40121759 1.1176e-17 1.0000e+00 hypermethylated 2.4836e-16 1.0000e+00 hypermethylated 2.2754e-10 1.0000e+00 hypermethylated 1.2641e-08 1.0000e+00 hypermethylated 4.8077e-01 3.5707e-05 hypermethylated 1.1519e-03 hypermethylated 0.710504 0.4149660 0.29579168 6 0.724068 0.446684 0.27738426 6.0595e-14 1.0000e+00 hypermethylated 8.6565e-12 1.0000e+00 hypermethylated 1.6515e-13 1.0000e+00 hypermethylated 8.2573e-11 1.0000e+00 hypermethylated 3.5613e-01 3.6095e-04 hypermethylated 2.7943e-02 hypermethylated 0.769531 0.2877013 0.48317523 6 0.733388 0.266833 0.46655439 9.3562e-16 1.0000e+00 hypermethylated 2.5989e-14 1.0000e+00 hypermethylated 2.7279e-08 9.9999e-01 hypermethylated 1.0911e-06 1.0000e+00 hypermethylated 4.6792e-01 1.5739e-05 hypermethylated 6.5580e-04 hypermethylated 0.769900 0.4149660 0.36977756 6 0.783406 0.446684 0.33672222 2.3810e-14 1.0000e+00 hypermethylated 7.9366e-12 1.0000e+00 hypermethylated 2.3886e-10 1.0000e+00 hypermethylated 1.1943e-07 1.0000e+00 hypermethylated 0.34327993 2.4390e-04 hypermethylated 4.8780e-02 hypermethylated 0.2881232 0.4149660 -0.11567283 6 0.355778 0.446684 -0.0909059 9.4175e-01 2.0492e-03 weaklyHypometh 1.0000e+00 1.7366e-02 weaklyHypometh 9.5719e-01 2.2280e-02 weaklyHypometh 1.0000e+00 1.7824e-01 insignificant -0.1246395 1.0666e-01 insignificant 0.63870886 insignificant chr22 35105096 35106096 56988 MYH9 ENSG00000100345 0.8170021 193 7 0.808398 178 7 0.789136 189 7 0.8631629 183 7 0.6864286 99 7 0.775019 254 7 0.800816 125 7 0.8062836 134 7 0.6125307 125 7 0.8225837 110 7 0.802680 202 8 0.774330 110 7 0.8040339 131 7 0.697073 66 2 0.827661 176 7 0.8148781 86 5 0.6770375 77 6 0.7503110 168 7 0.797890 211 7 0.811201 194 7 0.862374 42 4 0.8378685 70 4 0.744744 176 7 0.649074 65 4 0.8841270 62 6 0.8228048 227 7 0.652986 149 6 0.7741582 69 4 0.871998 156 7 0.8831874 269 7 0.861920 225 7 0.867474 285 7 0.7963274 150 7 0.6204545 117 7 0.8213031 166 6 0.6864847 88 7 0.8560606 100 4 0.7062804 215 8 0.668002 262 8 0.7612060 244 7 0.7762377 173 7 0.8302587 215 7 0.772671 254 8 0.7218772 0.732201 0.723202 0.8116424 0.7113951 0.8990709 0.7767918 0.7712346 0.6478478 0.8144173 0.854644 0.764206 0.7660027 0.767286 0.7789309 0.7682827 0.7974375 0.7073587 0.7574337 0.800230 0.857003 0.80111699 0.8312130 0.8569753 0.84732510 0.8003326 0.7341849 0.6292200 0.853448 0.884624 0.8559296 0.755877 0.6895912 0.7136364 0.8826106 0.6490660 0.8734381 0.7697446 0.8847615 0.8319222 0.9012180 0.9034599 0.9149616 4 0.761065 0.810538 -5.4551e-02 7 0.772036 0.791711 -0.0196742 0.93756495 6.8589e-02 insignificant 1.00000 9.0248e-01 insignificant 0.9787577 0.14612878 insignificant 1 1.00000 insignificant -0.03247012 0.2665091 insignificant 1.00000 insignificant 0.761905 0.7870813 -0.03819695 7 0.807756 0.714302 0.09345430 1.4134e-01 5.0827e-03 weaklyHypometh 5.7456e-01 1.6396e-01 insignificant 2.0261e-02 3.2294e-01 inconclusive 1.4070e-01 1.0000e+00 insignificant 2.9104e-02 4.8771e-01 insignificant 1.0000e+00 insignificant 0.760306 0.8649826 -0.09706268 7 0.716891 0.740777 -0.02388607 9.5061e-01 7.6446e-04 weaklyHypometh 1.0000e+00 4.0235e-02 weaklyHypometh 9.7571e-01 4.8601e-03 weaklyHypometh 1.0000e+00 1.6759e-01 insignificant 1.5248e-02 6.2495e-01 insignificant 1.0000e+00 insignificant 0.810277 0.7870813 0.01633994 7 0.810249 0.714302 0.09594660 7.0521e-02 2.9578e-01 insignificant 3.2055e-01 1.0000e+00 insignificant 8.1595e-03 6.8227e-01 weaklyHypermeth 6.3252e-02 1.0000e+00 weaklyHypermeth 6.1574e-02 1.9808e-01 insignificant 9.5689e-01 insignificant 0.810538 0.8680070 -0.05926179 7 0.791711 0.797760 -0.00604930 7.1968e-01 1.0016e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.7324e-01 9.6653e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 0.04771799 2.1244e-01 insignificant 1.0000e+00 insignificant 0.7870813 0.8728738 -0.09204034 7 0.714302 0.825159 -0.1108573 9.8067e-01 1.3519e-03 weaklyHypometh 1.0000e+00 1.2754e-02 weaklyHypometh 9.9078e-01 7.3561e-04 weaklyHypometh 1.0000e+00 1.2468e-02 weaklyHypometh -0.0138565 7.6759e-01 insignificant 1.00000000 insignificant chr22 35159796 35160796 56994 ENSG00000219717 0.6649878 150 9 0.568786 133 9 0.629630 36 3 0.6149489 180 8 0.6752646 45 3 0.575885 126 9 0.670455 80 8 0.7708586 100 9 0.6333333 68 9 0.7266667 51 8 0.611969 220 9 0.750000 4 0 0.6106116 74 9 0.596970 50 8 0.529762 66 9 0.3888889 22 0 0.8000000 11 0 0.6326291 180 8 0.541567 94 9 0.621649 84 9 0.469231 25 1 0.5625000 16 0 0.671959 86 8 0.667989 46 4 0.7388141 76 3 0.5992757 134 9 0.461039 22 1 0.5495868 24 1 0.405902 95 4 0.5942378 134 9 0.616784 117 9 0.602800 115 9 0.5347578 127 9 0.5849126 68 8 0.5784074 125 9 0.6250000 7 0 0.3711311 86 5 0.6380471 125 9 0.632682 117 9 0.6221429 125 8 0.6006745 129 9 0.6785714 84 3 0.665344 122 8 0.6045232 0.557003 0.621212 0.5628941 0.6352814 0.6387191 0.5568182 0.7397153 0.6333333 0.6606061 0.600886 0.645382 0.7287157 0.703030 0.5800866 0.4545455 0.7067519 0.6433570 0.6477273 0.576632 0.590909 0.59090909 0.6490165 0.6341991 0.59701420 0.6718622 0.4545455 0.6363636 0.429354 0.663223 0.6136780 0.563535 0.5581456 0.5292142 0.5799144 0.5360196 0.5488002 0.5909091 0.6283716 0.6451948 0.5976850 0.6437118 0.6160173 0 0.637648 0.619101 1.9666e-02 9 0.614496 0.500852 0.1136445 0.06215945 8.4472e-01 insignificant 1.00000 1.0000e+00 insignificant 0.0719886 0.84809804 insignificant 1 1.00000 insignificant 0.05239992 0.1439334 lowCoverage 1.00000 lowCoverage 0.637288 0.5855019 0.05249101 9 0.561778 0.395402 0.16637602 1.0076e-01 9.9998e-01 insignificant 4.2695e-01 1.0000e+00 insignificant 1.9363e-01 9.9999e-01 insignificant 9.3089e-01 1.0000e+00 insignificant 7.5367e-02 1.3157e-01 insignificant 7.1791e-01 insignificant 0.638347 0.6447140 -0.00381035 8 0.640131 0.628856 0.01127475 7.3903e-01 7.7087e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.2830e-01 9.1127e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -9.1399e-03 7.1941e-01 insignificant 1.0000e+00 insignificant 0.620495 0.5898876 0.03436565 9 0.542589 0.527203 0.01538649 2.2754e-01 8.0497e-01 insignificant 8.7677e-01 1.0000e+00 insignificant 4.1269e-01 8.1232e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.2967e-02 6.4606e-01 lowCoverage 1.0000e+00 lowCoverage 0.622146 0.6447140 -0.01842682 8 0.607050 0.628856 -0.02180578 8.5843e-01 5.7560e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.7466e-01 4.7809e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.06153981 6.7647e-02 lowCoverage 8.0532e-01 lowCoverage 0.5950096 0.6447140 -0.05097998 8 0.595530 0.628856 -0.0333264 8.9080e-01 6.5825e-02 insignificant 1.0000e+00 3.3584e-01 insignificant 9.3339e-01 2.2047e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.0845070 9.0563e-02 insignificant 0.58047240 insignificant chr22 35185196 35186196 56997 ENSG00000219717 0.3489436 211 9 0.302884 229 11 0.191431 246 11 0.3054969 168 9 0.2271835 276 14 0.346879 270 9 0.222113 272 12 0.3507754 255 11 0.3109924 247 9 0.2754062 246 9 0.221651 213 11 0.142196 146 12 0.3054422 220 12 0.381301 167 12 0.364215 213 7 0.3866667 125 7 0.0419580 48 4 0.5169316 200 9 0.442424 44 5 0.382044 195 7 0.454167 37 4 0.3373656 107 4 0.214179 205 10 0.200000 76 6 0.2766865 128 8 0.1914755 226 10 0.320745 145 8 0.3357143 90 4 0.440743 122 9 0.2490221 267 8 0.339843 185 9 0.397149 260 7 0.6963295 176 9 0.8080128 85 9 0.6990493 208 9 0.7716049 30 2 0.4813264 209 13 0.7084205 154 9 0.424769 214 9 0.4512966 207 9 0.4928246 208 9 0.5676046 175 9 0.404971 223 9 0.2203288 0.152848 0.150982 0.1693068 0.2210165 0.1812508 0.1609126 0.1853933 0.1762586 0.2116146 0.137397 0.149079 0.2072271 0.176197 0.1683490 0.1932153 0.1793754 0.3410687 0.1778761 0.190750 0.245694 0.12233332 0.2095080 0.1231563 0.17806185 0.1619676 0.1218820 0.1928993 0.232039 0.163055 0.1740708 0.235764 0.5921054 0.8157477 0.6530453 0.7694048 0.5911428 0.6623455 0.2169169 0.2622145 0.1933002 0.3364987 0.2736006 4 0.228686 0.194805 -1.5404e-03 9 0.301501 0.235459 0.0660415 0.71340789 7.0734e-01 insignificant 1.00000 1.0000e+00 insignificant 0.5825981 0.95252963 insignificant 1 1.00000 insignificant -0.00974416 0.7847416 insignificant 1.00000 insignificant 0.228493 0.6821346 -0.39987885 9 0.257845 0.554403 -0.29655845 9.9858e-01 1.3422e-49 hypomethylated 1.0000e+00 4.4742e-47 hypomethylated 9.9428e-01 8.2480e-13 hypomethylated 1.0000e+00 2.7493e-10 hypomethylated -3.9078e-01 7.4711e-05 hypomethylated 1.8222e-03 hypomethylated 0.231633 0.5370370 -0.10037227 9 0.310305 0.457130 -0.14682517 1.0000e+00 5.0786e-06 weaklyHypometh 1.0000e+00 7.2552e-04 weaklyHypometh 1.0000e+00 2.7249e-03 weaklyHypometh 1.0000e+00 1.1354e-01 insignificant -1.6495e-01 1.2258e-03 weaklyHypometh 5.5718e-02 weaklyHypometh 0.194791 0.6821346 -0.46368119 9 0.237676 0.554403 -0.31672750 9.9982e-01 9.3894e-32 hypomethylated 1.0000e+00 4.6947e-29 hypomethylated 9.9998e-01 2.5849e-09 hypomethylated 1.0000e+00 6.4623e-07 hypomethylated -3.8103e-01 8.2278e-05 hypomethylated 2.1756e-03 hypomethylated 0.195068 0.5370370 -0.09833948 9 0.259941 0.457130 -0.19718882 1.0000e+00 2.7247e-05 weaklyHypometh 1.0000e+00 4.5412e-03 weaklyHypometh 1.0000e+00 1.5255e-03 weaklyHypometh 1.0000e+00 2.1801e-01 insignificant -0.15520217 2.2486e-03 weaklyHypometh 1.5984e-01 insignificant 0.6902238 0.5361328 0.26734068 9 0.643881 0.415371 0.2285102 2.2783e-09 5.4086e-01 hypermethylated 3.2547e-07 1.0000e+00 hypermethylated 1.5188e-04 8.5295e-01 hypermethylated 1.6875e-02 1.0000e+00 hypermethylated 0.2258309 3.1847e-03 weaklyHypermeth 0.05105680 weaklyHypermeth chr22 35268496 35269496 57000 ENSG00000188078 0.7090147 171 5 0.658664 155 5 0.672906 54 4 0.8327120 96 4 0.8483289 52 4 0.741176 172 5 0.656141 63 5 0.7743312 120 6 0.7921503 65 5 0.8103084 57 5 0.657085 173 5 0.740741 39 3 0.7969357 116 6 0.466667 28 2 0.777191 88 5 0.7348485 31 2 0.8625000 25 2 0.7129787 95 4 0.783696 116 5 0.753477 142 5 0.826389 40 4 0.6604167 66 4 0.573359 81 5 0.777778 48 5 0.5876984 40 4 0.7285119 157 5 0.754180 93 6 0.7142857 23 2 0.777918 78 5 0.7187500 142 5 0.507641 133 6 0.705527 191 5 0.7037812 103 5 0.7302910 82 5 0.7694041 146 6 0.4972222 27 2 0.7218741 77 5 0.7283396 117 5 0.738697 121 5 0.7860799 116 5 0.6988988 137 4 0.7397727 69 4 0.739125 116 4 0.8080548 0.662988 0.618068 0.8090381 0.7655514 0.7648802 0.6844777 0.7597982 0.6994911 0.7817072 0.809957 0.732194 0.8022267 0.819528 0.7263880 0.7170422 0.7888209 0.7434534 0.7777684 0.785635 0.794516 0.75590114 0.7143227 0.8433048 0.83483886 0.7530213 0.7640234 0.7920228 0.773143 0.834722 0.7449281 0.705113 0.6218714 0.6398781 0.7215049 0.6517967 0.6850674 0.7125103 0.7758834 0.8085202 0.7342230 0.8417638 0.7663315 2 0.764801 0.744505 2.2627e-03 5 0.726401 0.643712 0.0826889 0.06495833 9.3046e-01 insignificant 1.00000 1.0000e+00 insignificant 0.1769685 0.82994696 insignificant 1 1.00000 insignificant 0.04472146 0.2012372 lowCoverage 1.00000 lowCoverage 0.765152 0.7300725 0.04533775 5 0.729334 0.747934 -0.01860027 4.7375e-02 3.9938e-01 weaklyHypermeth 2.2887e-01 1.0000e+00 insignificant 6.5143e-02 4.5521e-01 insignificant 3.8546e-01 1.0000e+00 insignificant 4.7274e-02 3.2163e-01 lowCoverage 1.0000e+00 lowCoverage 0.761582 0.7817531 -0.01546445 4 0.722340 0.745329 -0.02298930 8.7256e-01 7.5169e-02 lowCoverage 1.0000e+00 9.0463e-01 lowCoverage 8.6534e-01 4.7388e-02 lowCoverage 1.0000e+00 6.9688e-01 lowCoverage -1.4220e-03 9.5396e-01 lowCoverage 1.0000e+00 lowCoverage 0.747922 0.7300725 0.04577225 5 0.678198 0.747934 -0.06973606 3.1291e-02 1.2881e-01 weaklyHypermeth 1.5568e-01 1.0000e+00 insignificant 1.4373e-02 4.9330e-01 weaklyHypermeth 9.9810e-02 1.0000e+00 weaklyHypermeth 2.5524e-03 9.5901e-01 lowCoverage 1.0000e+00 lowCoverage 0.749516 0.7817531 -0.00808996 4 0.729848 0.745329 -0.01548160 7.8474e-01 1.9766e-02 lowCoverage 1.0000e+00 5.6476e-01 lowCoverage 5.8140e-01 1.9673e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.04614345 1.5407e-01 lowCoverage 1.0000e+00 lowCoverage 0.7173077 0.7817531 -0.08119190 4 0.679615 0.745329 -0.0657143 9.7953e-01 7.4994e-04 lowCoverage 1.0000e+00 7.5751e-03 lowCoverage 9.9365e-01 5.2963e-04 lowCoverage 1.0000e+00 9.6753e-03 lowCoverage -0.0486959 2.9151e-01 lowCoverage 1.00000000 lowCoverage chr22 35998696 35999696 57018 RAC2 ENSG00000128340 0.8754964 152 5 0.7442888 140 5 0.748312 110 5 0.9789894 119 5 0.9034706 88 5 0.941166 272 5 0.892597 153 5 0.905455 111 5 0.860308 105 5 0.925641 61 2 0.8366669 220 5 0.8666667 54 5 0.8538462 70 5 0.9833333 65 5 0.9792340 127 5 0.8945614 57 5 NA 0 0 0.7053780 130 2 0.865357 231 5 0.954061 162 5 0.9133333 60 5 1.000000 2 0 0.911992 112 5 0.9005952 51 5 0.8333333 17 2 0.795378 164 5 0.847131 103 5 0.783088 56 5 0.889579 200 5 0.861057 215 5 0.8287099 218 5 0.939095 169 5 0.4632479 146 5 0.692980 144 5 0.200000 212 5 NA 0 0 0.674735 141 5 0.059363 284 5 0.9178775 260 5 0.8681707 204 5 0.8716150 126 2 0.9176768 241 5 0.848695 144 5 0.8810448 0.8161753 0.7579579 0.9595840 0.8937709 0.914633 0.9034687 0.902215 0.9111537 0.9597724 0.8986409 0.948980 0.872645 0.9681122 0.9599436 0.8485231 NA 0.7311061 0.9121576 0.9629627 0.9260204 0.9725236 0.896614 0.9036079 1.0000000 0.903394 0.8363348 0.884004 0.9049262 0.886787 0.8905672 0.926992 0.5720100 0.7186243 0.3877551 NA 0.753403 0.076080 0.9189669 0.9007093 0.8553507 0.9444187 0.8847670 2 0.896125 0.906960 -9.3059e-03 5 0.877726 0.891541 -0.01381469 9.0193e-01 4.3583e-01 insignificant 1.000000 1.000000 insignificant 0.9619376 2.8008e-01 insignificant 1 1.000000 insignificant 4.4535e-03 0.86325817 lowCoverage 1.00000 lowCoverage 0.896125 0.3764833 0.4775418 5 0.877726 0.3057004 5.7203e-01 9.0491e-26 1.0000e+00 hypermethylated 3.0164e-24 1.0000e+00 hypermethylated 1.1637e-08 9.9996e-01 hypermethylated 3.6365e-07 1.0000e+00 hypermethylated 4.6166e-01 2.0959e-02 lowCoverage 1.9588e-01 lowCoverage 0.896125 0.9066667 -0.0090782 5 0.877726 0.888071 -0.01034499 8.0535e-01 2.9249e-01 insignificant 1.0000e+00 1.0000000 insignificant 6.4752e-01 4.8982e-01 insignificant 1.0000e+00 1.000000 insignificant -0.00507908 8.2733e-01 lowCoverage 1.0000e+00 lowCoverage 0.906960 0.3764833 0.48180796 5 0.891541 0.3057004 0.5858407 4.0609e-19 1.0000e+00 hypermethylated 1.2690e-17 1.0000e+00 hypermethylated 4.5498e-07 9.9999e-01 hypermethylated 1.4218e-05 1.0000e+00 hypermethylated 0.45720907 2.1652e-02 lowCoverage 2.0819e-01 lowCoverage 0.906960 0.9066667 2.5224e-04 5 0.891541 0.888071 3.4697e-03 4.2176e-01 5.4346e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.5390e-01 0.78543114 insignificant 1.0000e+00 1.00000 insignificant -0.00953262 6.8300e-01 lowCoverage 1.000000 lowCoverage 0.376483 0.9066667 -0.5026732 5 0.3057004 0.888071 -0.5823710 1.0000e+00 1.7986e-10 hypomethylated 1.0000e+00 5.2901e-09 hypomethylated 9.9989e-01 3.6236e-05 hypomethylated 1.0000000 1.0693e-03 hypomethylated -0.46674169 2.0520e-02 lowCoverage 2.2190e-01 lowCoverage chr22 36048796 36049796 57025 CYTH4 ENSG00000100055 0.7061766 215 6 0.6148512 210 7 0.526066 120 6 0.7117575 184 7 0.7334570 91 6 0.639491 278 7 0.750298 98 7 0.628623 168 7 0.709655 108 6 0.709740 77 3 0.6595307 230 6 0.7619048 58 6 0.6346419 149 7 0.8416667 47 3 0.8167670 120 6 0.6666667 45 3 0.8855263 58 4 0.7135913 176 6 0.678365 117 6 0.761953 224 6 0.4981399 48 3 0.634718 79 6 0.733497 155 6 0.6498677 100 3 0.7333883 72 3 0.591407 217 6 0.638049 65 6 0.661445 70 3 0.796474 148 6 0.693036 185 6 0.6243092 175 6 0.675281 298 7 0.5945426 179 6 0.746691 104 6 0.644251 128 6 0.7669173 46 2 0.648646 107 6 0.561998 174 6 0.6939720 172 6 0.6030333 228 6 0.6676009 203 6 0.6745607 141 6 0.690826 170 6 0.7813528 0.7229077 0.7061074 0.7722130 0.8310979 0.777867 0.8440944 0.730717 0.6615797 0.7495832 0.7657439 0.745997 0.693229 0.7886463 0.8591752 0.6637768 0.7619398 0.7570943 0.7298881 0.7643760 0.7195233 0.7621821 0.747062 0.8350315 0.7235025 0.773499 0.6904362 0.800647 0.7173730 0.810220 0.7705788 0.801166 0.6804133 0.6962948 0.7395747 0.78303838 0.737899 0.681891 0.7889518 0.7471382 0.7853827 0.7466652 0.8521117 3 0.758745 0.778536 -1.1865e-02 6 0.670046 0.671481 -0.00143430 8.1558e-01 3.0463e-01 insignificant 1.000000 1.000000 insignificant 0.4271041 3.2044e-01 insignificant 1 1.000000 insignificant 4.6735e-02 0.11831134 insignificant 1.00000 insignificant 0.758745 0.6964770 0.0645007 6 0.670046 0.5784340 9.1612e-02 5.5839e-04 9.9931e-01 weaklyHypermeth 3.7985e-03 1.0000e+00 weaklyHypermeth 4.6353e-02 9.8870e-01 weaklyHypermeth 2.9153e-01 1.0000e+00 insignificant 4.7029e-02 2.5104e-01 insignificant 1.0000e+00 insignificant 0.758745 0.7757112 -0.0218498 6 0.670046 0.599085 0.07096193 1.9167e-01 3.4449e-01 insignificant 1.0000e+00 1.0000000 insignificant 4.2013e-01 4.1590e-01 insignificant 1.0000e+00 1.000000 insignificant 0.04153773 1.1562e-01 insignificant 1.0000e+00 insignificant 0.778536 0.6964770 0.07670121 6 0.671481 0.5784340 0.0930468 2.4948e-04 9.9849e-01 weaklyHypermeth 1.9191e-03 1.0000e+00 weaklyHypermeth 5.5272e-02 8.6751e-01 insignificant 3.2705e-01 1.0000e+00 insignificant 0.00029311 9.9429e-01 insignificant 1.0000e+00 insignificant 0.778536 0.7757112 -7.3808e-03 6 0.671481 0.599085 7.2396e-02 3.9614e-01 7.7867e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.7460e-01 0.73304017 insignificant 1.0000e+00 1.00000 insignificant -0.00519771 8.5288e-01 insignificant 1.000000 insignificant 0.696477 0.7757112 -0.0830369 6 0.5784340 0.599085 -0.0206505 9.3675e-01 8.8728e-03 weaklyHypometh 1.0000e+00 6.0773e-02 weaklyHypometh 8.9900e-01 2.3351e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.00549083 8.8650e-01 insignificant 1.0000e+00 insignificant chr22 36071696 36072696 57028 CYTH4 ENSG00000100055 0.9012135 221 7 0.7412883 204 7 0.627498 84 5 0.8688649 241 7 0.8555556 56 5 0.876329 240 7 0.792287 84 5 0.859445 102 7 0.790972 53 4 0.819255 45 4 0.9473543 257 7 0.8500000 13 1 0.9350197 102 5 0.6925466 32 2 0.7943005 85 5 0.8250000 14 2 1.0000000 3 0 0.6783464 217 7 0.941065 137 7 0.867910 167 7 0.7477217 94 6 0.872266 80 4 0.822771 113 7 0.7824675 62 4 0.7687855 116 7 0.900403 162 7 0.741400 122 5 0.783333 36 2 0.820862 129 6 0.949858 172 7 0.8983718 190 7 0.907158 229 7 0.1417234 198 7 0.168727 117 7 0.145455 140 5 0.2022556 159 6 0.247972 152 6 0.146752 284 7 0.7610599 189 7 0.7438095 199 7 0.7886242 260 7 0.6911325 78 5 0.661087 212 7 0.8865012 0.7232236 0.6526062 0.8652328 0.8840996 0.922090 0.8086250 0.841112 0.8904534 0.7888377 0.9586604 0.645115 0.906538 0.9176054 0.6769789 0.9351426 0.9772271 0.6030446 0.9008568 0.9124579 0.8547686 0.6994969 0.950477 0.8102142 0.8707718 0.819711 0.8409836 0.897824 0.7109195 0.861771 0.9009431 0.900947 0.0688743 0.0816939 0.0459770 0.09857834 0.074083 0.082601 0.7667991 0.8275479 0.7383477 0.7184105 0.5833486 1 0.829444 0.857523 -2.5348e-02 7 0.741663 0.713824 0.02783895 8.7764e-01 2.0722e-01 insignificant 1.000000 1.000000 insignificant 0.8660056 6.3941e-01 insignificant 1 1.000000 insignificant 2.6269e-04 0.99295124 insignificant 1.00000 insignificant 0.829444 0.0676835 0.7410160 7 0.741663 0.1213849 6.2028e-01 4.4046e-61 1.0000e+00 hypermethylated 7.3409e-59 1.0000e+00 hypermethylated 2.1362e-14 1.0000e+00 hypermethylated 2.9989e-12 1.0000e+00 hypermethylated 6.5773e-01 3.9284e-16 hypermethylated 7.8568e-14 hypermethylated 0.829444 0.7238806 0.0968927 7 0.741663 0.593028 0.14863430 6.7323e-04 9.9978e-01 weaklyHypermeth 2.1038e-02 1.0000000 weaklyHypermeth 4.7999e-03 9.9993e-01 weaklyHypermeth 1.6000e-01 1.000000 insignificant 0.10406993 6.5488e-03 weaklyHypermeth 2.2582e-01 insignificant 0.857523 0.0676835 0.77426834 7 0.713824 0.1213849 0.5924388 4.0737e-57 1.0000e+00 hypermethylated 1.3579e-54 1.0000e+00 hypermethylated 5.2676e-12 1.0000e+00 hypermethylated 5.2676e-10 1.0000e+00 hypermethylated 0.65746904 1.0769e-13 hypermethylated 3.5897e-11 hypermethylated 0.857523 0.7238806 1.2657e-01 7 0.713824 0.593028 1.2080e-01 3.9167e-06 9.9998e-01 weaklyHypermeth 2.6111e-04 1.0000e+00 weaklyHypermeth 6.9797e-04 0.99999709 weaklyHypermeth 3.4898e-02 1.00000 weaklyHypermeth 0.10380724 7.0247e-03 weaklyHypermeth 0.307809 insignificant 0.067684 0.7238806 -0.6483766 7 0.1213849 0.593028 -0.4716434 1.0000e+00 2.1647e-30 hypomethylated 1.0000e+00 7.2156e-28 hypomethylated 1.0000e+00 2.5170e-08 hypomethylated 1.0000000 2.5170e-06 hypomethylated -0.55366181 8.8379e-08 hypomethylated 4.4189e-05 hypomethylated chr22 36227596 36228596 57034 MFNG ENSG00000100060 0.7395520 247 7 0.3744707 201 7 0.404957 201 7 0.7028622 310 7 0.5889550 61 4 0.650424 343 7 0.532981 131 7 0.683930 214 7 0.553827 192 7 0.741613 173 7 0.6474598 262 7 0.5950126 61 5 0.4498511 280 7 0.6553030 144 4 0.6294123 248 7 0.3535714 55 4 0.4727679 37 5 0.7811069 337 7 0.543095 197 7 0.516219 229 7 0.7975275 90 7 0.495552 165 7 0.798719 149 7 0.5905651 158 7 0.6720537 128 6 0.602679 231 7 0.669963 130 7 0.620321 105 6 0.599217 178 7 0.380564 263 7 0.5959085 199 7 0.830791 264 7 0.3437888 167 7 0.347413 132 7 0.444691 253 6 0.3429903 83 6 0.583132 128 7 0.671953 177 7 0.5781227 201 7 0.8126532 225 7 0.7076056 231 6 0.5435580 269 6 0.612321 182 7 0.7530082 0.4454784 0.4912473 0.7272343 0.8023336 0.721130 0.6043011 0.674219 0.6919642 0.7340318 0.7251130 0.699178 0.478367 0.6663687 0.5750974 0.3649083 0.6710347 0.7850100 0.6781396 0.6494473 0.9353295 0.6727157 0.816161 0.7524494 0.7087652 0.558200 0.7342098 0.732373 0.6503879 0.362308 0.6152355 0.834369 0.3097320 0.3462908 0.4166114 0.32858579 0.497160 0.749527 0.5154708 0.8162038 0.7596412 0.5162379 0.6204990 5 0.654091 0.669417 -1.7465e-02 7 0.513782 0.557529 -0.04374690 9.8076e-01 1.4059e-01 insignificant 1.000000 1.000000 insignificant 0.9977868 2.5379e-02 weaklyHypometh 1 1.000000 insignificant -5.6953e-02 0.23477640 insignificant 1.00000 insignificant 0.657611 0.4180851 0.2325601 7 0.578005 0.4489758 1.2903e-01 6.0823e-10 8.9857e-01 hypermethylated 7.4174e-09 1.0000e+00 hypermethylated 2.3223e-04 9.2665e-01 hypermethylated 3.0160e-03 1.0000e+00 hypermethylated 1.2521e-01 8.9185e-02 insignificant 6.0670e-01 insignificant 0.660319 0.6768953 0.0072595 7 0.660577 0.666372 -0.00579559 4.9340e-01 5.9948e-01 insignificant 1.0000e+00 1.0000000 insignificant 5.9768e-01 7.3989e-01 insignificant 1.0000e+00 1.000000 insignificant -0.06998355 2.5416e-01 insignificant 1.0000e+00 insignificant 0.671547 0.4180851 0.25306638 7 0.593129 0.4489758 0.1441531 1.0883e-06 9.7528e-01 hypermethylated 1.2509e-05 1.0000e+00 hypermethylated 6.1932e-05 9.9173e-01 hypermethylated 1.0322e-03 1.0000e+00 hypermethylated 0.18216035 2.5813e-02 weaklyHypermeth 2.3891e-01 insignificant 0.674179 0.6768953 2.2393e-02 7 0.677862 0.666372 1.1489e-02 4.3722e-01 8.0638e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.7669e-01 0.97521171 insignificant 1.0000e+00 1.00000 insignificant -0.01303049 8.3691e-01 insignificant 1.000000 insignificant 0.417910 0.6768953 -0.2211370 7 0.4416867 0.666372 -0.2246856 9.9971e-01 1.9205e-04 hypomethylated 1.0000e+00 2.1105e-03 hypomethylated 9.9968e-01 6.3150e-03 weaklyHypometh 1.0000000 6.8641e-02 weaklyHypometh -0.19519083 2.9730e-02 weaklyHypometh 2.7028e-01 insignificant chr22 36227996 36228996 57035 MFNG ENSG00000100060 0.7675726 240 6 0.5168343 172 6 0.541960 168 6 0.7485773 303 6 0.8521825 39 3 0.733899 327 6 0.627308 117 6 0.723845 187 6 0.777170 160 6 0.802715 157 6 0.7478951 247 6 0.6683502 56 5 0.5775793 264 6 0.6616162 133 3 0.6628858 234 6 0.4125000 50 3 0.7314286 23 4 0.7862914 329 6 0.745199 182 6 0.702899 212 6 0.9300366 79 6 0.691244 147 6 0.854916 136 6 0.7802921 131 6 0.7423960 124 6 0.592014 204 6 0.775778 112 6 0.834803 75 5 0.697104 159 6 0.439043 223 6 0.6850208 162 6 0.850208 257 6 0.3795815 136 6 0.377537 126 6 0.509588 250 6 0.4001554 79 6 0.604670 100 6 0.773192 146 6 0.5835675 190 6 0.8184658 216 6 0.8255398 229 6 0.5508176 265 6 0.681041 177 6 0.7648375 0.4569603 0.4976571 0.7466912 0.8423879 0.715991 0.6110960 0.689188 0.7161033 0.7574215 0.7272502 0.695867 0.500845 0.6683235 0.5846430 0.3886808 0.7066070 0.7872908 0.6951736 0.6638366 0.9441458 0.6961825 0.839263 0.7819249 0.7386522 0.551133 0.7576111 0.775259 0.6529466 0.359185 0.6125054 0.842192 0.3215040 0.3579927 0.4111789 0.34999203 0.527136 0.794153 0.5135175 0.8187071 0.8091292 0.5172958 0.6478931 5 0.680000 0.701493 -1.3018e-02 6 0.701908 0.713971 -0.01206256 8.4056e-01 4.7870e-01 insignificant 1.000000 1.000000 insignificant 0.9731318 5.0305e-02 insignificant 1 1.000000 insignificant -4.9969e-02 0.28327892 insignificant 1.00000 insignificant 0.680000 0.4575866 0.2249905 6 0.701908 0.5004496 2.0146e-01 2.0440e-08 9.9995e-01 hypermethylated 2.3495e-07 1.0000e+00 hypermethylated 6.2878e-04 9.9901e-01 hypermethylated 7.3974e-03 1.0000e+00 hypermethylated 1.8198e-01 3.5826e-02 weaklyHypermeth 3.0621e-01 insignificant 0.680000 0.6815227 0.0112910 6 0.701908 0.691413 0.01049542 3.6349e-01 7.5190e-01 insignificant 1.0000e+00 1.0000000 insignificant 5.3945e-01 7.1489e-01 insignificant 1.0000e+00 1.000000 insignificant -0.00245108 9.6996e-01 insignificant 1.0000e+00 insignificant 0.701493 0.4575866 0.23994590 6 0.713971 0.5004496 0.2135212 2.6146e-05 9.9996e-01 hypermethylated 2.4880e-04 1.0000e+00 hypermethylated 2.6445e-04 9.9998e-01 hypermethylated 3.8890e-03 1.0000e+00 hypermethylated 0.23195051 1.3488e-02 weaklyHypermeth 1.4987e-01 insignificant 0.701493 0.6815227 2.5573e-02 6 0.713971 0.691413 2.2558e-02 3.4250e-01 8.4787e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.6277e-01 0.96316701 insignificant 1.0000e+00 1.00000 insignificant 0.04751815 5.1029e-01 insignificant 1.000000 insignificant 0.457587 0.6815227 -0.2119867 6 0.5004496 0.691413 -0.1909632 9.9834e-01 5.0420e-03 weaklyHypometh 1.0000e+00 3.7073e-02 weaklyHypometh 9.9857e-01 1.2019e-02 weaklyHypometh 1.0000000 1.1338e-01 insignificant -0.18443236 6.1234e-02 insignificant 4.2380e-01 insignificant chr22 36238196 36239196 57038 CARD10 ENSG00000100065 0.6528883 203 6 0.6103896 125 6 0.601483 113 6 0.6437223 157 6 0.6249339 59 6 0.703740 247 6 0.701768 71 6 0.599207 95 6 0.653809 101 6 0.727813 110 6 0.6891753 219 6 0.6385747 48 3 0.4563299 150 6 NA 0 0 0.5761905 123 6 0.5788656 46 2 0.4501526 111 6 0.4241942 233 6 0.548127 175 6 0.585678 215 6 0.6702381 69 6 0.234999 176 6 0.651686 214 6 0.4102708 79 6 0.5738304 80 6 0.591782 221 6 0.528088 85 6 0.543043 74 6 0.715300 125 6 0.430314 212 6 0.4280894 245 6 0.830963 385 6 0.1844532 145 6 0.139683 116 6 0.211429 280 5 0.1937229 59 5 0.242857 65 6 0.206443 224 6 0.3315465 252 6 0.3356600 282 6 0.3435439 201 6 0.2919057 223 6 0.391421 257 6 0.6474230 0.5553738 0.5393240 0.6448321 0.6179552 0.703789 0.7045049 0.609551 0.6516450 0.7681119 0.7025129 0.641729 0.367723 NA 0.5868736 0.5859459 0.5263133 0.4284765 0.5626383 0.5971631 0.6634475 0.2420406 0.677088 0.4859000 0.5552947 0.594737 0.5452728 0.557052 0.6755624 0.507129 0.5026939 0.798588 0.1952081 0.1457107 0.1855003 0.20261199 0.206367 0.213766 0.3484906 0.3510242 0.4215834 0.3581142 0.4100920 6 0.582084 0.581170 4.4925e-03 6 0.606651 0.563150 0.04350077 4.9577e-01 8.1781e-01 insignificant 1.000000 1.000000 insignificant 0.1060564 9.7463e-01 insignificant 1 1.000000 insignificant 5.2812e-02 0.30971507 insignificant 1.00000 insignificant 0.582084 0.1597300 0.4203851 6 0.606651 0.2280062 3.7864e-01 1.5557e-27 1.0000e+00 hypermethylated 5.7617e-26 1.0000e+00 hypermethylated 9.5855e-13 1.0000e+00 hypermethylated 7.3735e-11 1.0000e+00 hypermethylated 4.0710e-01 8.6222e-14 hypermethylated 7.1851e-12 hypermethylated 0.582084 0.2658436 0.2511966 6 0.606651 0.305830 0.30082080 1.5236e-13 4.0363e-01 hypermethylated 3.0471e-11 1.0000000 hypermethylated 4.8318e-08 3.9290e-01 hypermethylated 9.6636e-06 1.000000 hypermethylated 0.26471308 8.6021e-09 hypermethylated 8.6021e-06 hypermethylated 0.581170 0.1597300 0.42630725 6 0.563150 0.2280062 0.3351439 7.9661e-16 9.9997e-01 hypermethylated 1.9430e-14 1.0000e+00 hypermethylated 2.1419e-10 9.9998e-01 hypermethylated 1.1273e-08 1.0000e+00 hypermethylated 0.35428585 6.0219e-06 hypermethylated 2.3161e-04 hypermethylated 0.581170 0.2658436 2.5881e-01 6 0.563150 0.305830 2.5732e-01 1.3938e-06 6.8528e-01 hypermethylated 9.9558e-05 1.0000e+00 hypermethylated 1.4769e-06 0.76332388 hypermethylated 2.4615e-04 1.00000 hypermethylated 0.21190156 7.7341e-04 hypermethylated 0.118575 insignificant 0.159730 0.2658436 -0.1812913 6 0.2280062 0.305830 -0.0778239 1.0000e+00 3.3210e-13 weaklyHypometh 1.0000e+00 1.4439e-11 weaklyHypometh 9.9927e-01 4.0811e-09 weaklyHypometh 1.0000000 5.8301e-07 weaklyHypometh -0.14238429 1.1168e-04 weaklyHypometh 5.0763e-03 weaklyHypometh chr22 36272496 36273496 57043 CARD10 ENSG00000100065 0.5333667 360 9 0.3022476 279 6 0.663627 163 6 0.6081852 300 6 0.5477124 129 7 0.566327 365 7 0.373210 147 5 0.531368 230 7 0.391760 158 6 0.502226 140 7 0.7423397 363 9 0.3379651 81 6 0.4305538 188 6 0.5670635 87 3 0.4494359 150 6 0.3750000 52 3 0.1770833 31 4 0.5364772 711 6 0.386594 370 9 0.453797 301 7 0.5063883 176 8 0.344027 139 6 0.690998 163 6 0.5066165 104 6 0.5811128 692 8 0.388555 392 7 0.487740 249 9 0.368859 77 4 0.559073 193 7 0.562122 318 9 0.4396018 383 7 0.446468 330 7 0.0965372 294 9 0.033023 271 7 0.077056 460 9 0.0093180 273 8 0.237625 168 7 0.060788 504 9 0.4100668 251 7 0.5253406 336 9 0.3357591 419 6 0.4739434 363 7 0.253334 263 7 0.3038827 0.2352007 0.4017487 0.3278520 0.2077269 0.451184 0.2458620 0.308199 0.2915644 0.3767586 0.4630218 0.248391 0.283363 0.3361796 0.3368277 0.2216307 0.1608011 0.2763114 0.2120995 0.3041517 0.3164910 0.1961651 0.417423 0.2991260 0.3418729 0.283472 0.3121537 0.229845 0.3237313 0.315376 0.2770228 0.378501 0.1610273 0.0497666 0.1889569 0.00713258 0.222748 0.051107 0.3512080 0.3227003 0.2402207 0.2128730 0.2447645 4 0.322756 0.326175 1.0126e-02 7 0.606826 0.459207 0.14761930 5.5484e-01 9.7722e-01 insignificant 1.000000 1.000000 insignificant 0.8038424 7.3716e-01 insignificant 1 1.000000 insignificant -1.6313e-02 0.69622588 insignificant 1.00000 insignificant 0.322384 0.0975114 0.2017068 7 0.561525 0.1728835 3.8864e-01 5.8829e-30 9.9913e-01 hypermethylated 2.2627e-28 1.0000e+00 hypermethylated 1.5414e-12 1.0000e+00 hypermethylated 9.3002e-11 1.0000e+00 hypermethylated 3.8809e-01 4.7428e-07 hypermethylated 2.1558e-05 hypermethylated 0.322237 0.2150735 0.0466030 7 0.512806 0.433938 0.07886749 2.1374e-02 9.6539e-01 weaklyHypermeth 3.8863e-01 1.0000000 insignificant 4.5235e-02 9.7408e-01 weaklyHypermeth 8.5144e-01 1.000000 insignificant 0.07412808 2.3113e-01 insignificant 1.0000e+00 insignificant 0.325965 0.0974619 0.20902220 7 0.410044 0.1571668 0.2528773 3.9393e-32 9.9888e-01 hypermethylated 2.6262e-30 1.0000e+00 hypermethylated 5.1365e-11 1.0000e+00 hypermethylated 3.2103e-09 1.0000e+00 hypermethylated 0.40440556 6.7844e-07 hypermethylated 3.5708e-05 hypermethylated 0.326168 0.2150735 3.5646e-02 7 0.501165 0.433938 6.7227e-02 1.1237e-02 9.0920e-01 weaklyHypermeth 1.9375e-01 1.0000e+00 insignificant 3.8281e-02 0.98571955 weaklyHypermeth 8.8675e-01 1.00000 insignificant 0.09044120 1.5258e-01 insignificant 1.000000 insignificant 0.097053 0.2150735 -0.1191452 7 0.0809816 0.433938 -0.3529564 9.9968e-01 3.0728e-15 weaklyHypometh 1.0000e+00 1.9205e-13 weaklyHypometh 1.0000e+00 1.7429e-06 weaklyHypometh 1.0000000 8.2996e-05 weaklyHypometh -0.31396436 9.1532e-04 hypomethylated 2.1793e-02 hypomethylated chr22 36294896 36295896 57046 CDC42EP1 ENSG00000128283 0.5968240 166 5 0.2352230 137 5 0.403534 112 5 0.7201739 112 5 0.3255132 145 5 0.693523 303 5 0.450553 175 5 0.469551 140 5 0.446986 123 5 0.325893 26 3 0.5707803 172 3 0.3711312 49 3 0.4469167 112 5 0.7270563 81 5 0.5990659 107 5 0.5733333 36 3 0.8541667 14 0 0.5809873 79 3 0.360699 209 5 0.605951 346 5 0.5185185 52 3 0.545788 41 3 0.476339 89 3 0.3852899 64 3 0.5966667 48 4 0.517484 242 5 0.465743 136 5 0.327189 90 5 0.554116 149 5 0.572151 179 5 0.5601999 241 5 0.529082 332 5 0.5110211 91 3 0.518576 93 3 0.639026 184 5 0.4500000 13 2 0.743875 122 5 0.606694 257 5 0.7494236 259 5 0.6827948 160 5 0.6099650 79 5 0.5629221 105 5 0.636364 86 3 0.5062486 0.1969820 0.3686430 0.5550150 0.2873999 0.650312 0.3368757 0.467551 0.4224500 0.4417546 0.5840657 0.434620 0.373777 0.6489294 0.5056636 0.3606264 0.6745991 0.6024225 0.2657588 0.5079990 0.5212967 0.6051823 0.646057 0.3883601 0.5654362 0.473269 0.3394927 0.403237 0.5334965 0.474439 0.5058046 0.528461 0.5172721 0.5150643 0.3614882 0.60543485 0.612933 0.531817 0.7311795 0.6263837 0.5699066 0.4294953 0.6660311 3 0.486937 0.500301 -1.4914e-02 5 0.520435 0.525326 -0.00489176 6.7259e-01 3.7471e-01 insignificant 1.000000 1.000000 insignificant 0.6456768 3.8192e-01 insignificant 1 1.000000 insignificant 1.3846e-02 0.74727065 lowCoverage 1.00000 lowCoverage 0.486937 0.5605263 -0.0977623 5 0.520435 0.6368645 -1.1643e-01 9.9680e-01 1.0906e-02 weaklyHypometh 1.0000e+00 6.4036e-01 insignificant 9.8763e-01 8.7471e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -6.0306e-02 3.0411e-01 lowCoverage 1.0000e+00 lowCoverage 0.487131 0.6284470 -0.1623390 5 0.600362 0.658510 -0.05814790 1.0000e+00 3.2528e-04 weaklyHypometh 1.0000e+00 0.0366982 weaklyHypometh 9.9776e-01 6.8949e-03 weaklyHypometh 1.0000e+00 0.320971 insignificant -0.13040075 1.5639e-02 lowCoverage 3.8599e-01 lowCoverage 0.500301 0.5605263 -0.07901707 5 0.525326 0.6368645 -0.1115382 9.7512e-01 3.8067e-03 weaklyHypometh 1.0000e+00 3.0411e-01 insignificant 9.3395e-01 7.6470e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.07415137 1.6960e-01 lowCoverage 9.5280e-01 lowCoverage 0.500301 0.6288210 -1.4432e-01 5 0.525326 0.690212 -1.6489e-01 1.0000e+00 1.0222e-06 weaklyHypometh 1.0000e+00 5.1111e-04 weaklyHypometh 9.9990e-01 0.00043756 weaklyHypometh 1.0000e+00 0.10939 insignificant -0.14424652 5.7736e-03 lowCoverage 0.288679 lowCoverage 0.560526 0.6288210 -0.0580155 5 0.6368645 0.690212 -0.0533476 7.9895e-01 2.1187e-01 insignificant 1.0000e+00 9.0157e-01 insignificant 7.9430e-01 3.7706e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.07009515 2.2634e-01 lowCoverage 1.0000e+00 lowCoverage chr22 36477996 36478996 57053 TRIOBP ENSG00000100106 0.7681287 74 2 0.7310774 122 4 0.604561 144 5 0.7409420 77 1 0.7315117 79 4 0.881838 109 5 0.752941 133 5 0.576136 140 5 0.648046 128 5 0.699487 153 5 0.8140329 151 5 0.6212271 99 5 0.4754290 172 5 0.6590909 35 1 0.6647403 110 5 0.5202381 58 5 0.2892157 68 4 0.3607595 89 1 0.560778 161 5 0.826667 75 4 0.7109923 78 4 0.545689 45 2 0.702500 82 5 0.9113757 70 4 0.7862319 28 1 0.621881 130 5 0.748810 83 4 0.552198 55 3 0.795534 145 5 0.818690 166 5 0.7927254 120 5 0.817354 91 5 0.0063492 228 5 0.000000 156 5 0.000000 126 4 0.0000000 34 1 0.032353 78 4 0.000000 159 5 0.5184397 56 1 0.3052632 91 2 0.4836601 53 1 0.1400862 66 1 0.474702 63 1 0.8215556 0.6929175 0.6573427 0.7873214 0.7054766 0.826886 0.7875093 0.553050 0.7040501 0.7567918 0.7487353 0.609799 0.430656 0.7937319 0.6974700 0.7696470 0.3315988 0.4285872 0.5607130 0.8109557 0.9871109 0.3534414 0.850804 0.9427609 0.6216579 0.775948 0.6757826 0.605952 0.7480143 0.817714 0.6908861 0.807030 0.0290820 0.0000000 0.0000000 0.00000000 0.058145 0.000000 0.4329465 0.2915900 0.4853970 0.2869243 0.2557859 1 0.665136 0.773102 -1.1463e-01 4 0.580836 0.701787 -0.12095133 9.9944e-01 3.2271e-04 lowCoverage 1.000000 0.080676 lowCoverage 0.9949009 2.4046e-03 lowCoverage 1 0.345549 lowCoverage -8.7323e-02 0.07300407 lowCoverage 1.00000 lowCoverage 0.665136 0.0089629 0.6538857 5 0.580836 0.0039642 5.7687e-01 5.1963e-36 1.0000e+00 hypermethylated 2.5981e-34 1.0000e+00 hypermethylated 1.5235e-12 1.0000e+00 hypermethylated 9.3002e-11 1.0000e+00 hypermethylated 6.3989e-01 4.6806e-14 lowCoverage 4.6806e-12 lowCoverage 0.666206 0.3343465 0.3482113 1 0.666504 0.365288 0.30121549 1.5246e-10 1.0000e+00 lowCoverage 1.9057e-08 1.0000000 lowCoverage 6.9263e-06 1.0000e+00 lowCoverage 7.6959e-04 1.000000 lowCoverage 0.26191204 1.6341e-02 lowCoverage 3.8599e-01 lowCoverage 0.773102 0.0089629 0.76670752 4 0.701787 0.0039642 0.6978233 4.0879e-41 1.0000e+00 lowCoverage 5.8399e-39 1.0000e+00 lowCoverage 3.9030e-11 1.0000e+00 lowCoverage 2.7879e-09 1.0000e+00 lowCoverage 0.72721470 7.6671e-11 lowCoverage 9.5838e-09 lowCoverage 0.777985 0.3343465 4.1371e-01 1 0.782502 0.365288 4.1721e-01 2.9338e-13 1.0000e+00 lowCoverage 5.8676e-11 1.0000e+00 lowCoverage 2.8809e-07 0.99999991 lowCoverage 5.7618e-05 1.00000 lowCoverage 0.34923474 4.8196e-03 lowCoverage 0.271763 lowCoverage 0.009009 0.3343465 -0.3224824 1 0.0055499 0.365288 -0.3597386 1.0000e+00 2.1532e-11 lowCoverage 1.0000e+00 7.4248e-10 lowCoverage 1.0000e+00 1.2279e-06 lowCoverage 1.0000000 6.1394e-05 lowCoverage -0.37797996 5.9842e-03 lowCoverage 7.9789e-02 lowCoverage chr22 36759496 36760496 57064 ENSG00000222044 0.9280509 155 8 0.8935185 68 4 0.876877 89 5 0.8345246 224 8 0.7846154 44 4 0.903114 198 4 0.914706 57 3 0.949597 109 4 0.787469 69 5 0.912138 187 5 0.8732275 112 5 0.8266667 65 5 0.8977656 225 4 0.7887831 97 5 0.8389178 199 5 0.1333333 16 0 0.9500000 18 0 0.8567785 228 5 0.888154 118 4 0.925214 99 6 0.7666667 56 4 0.667596 90 4 0.883333 56 4 0.6038095 80 4 0.7607143 64 4 0.875541 253 5 0.907368 69 5 0.764396 58 5 0.869767 87 5 0.951790 215 5 0.9529445 232 5 0.728745 160 6 0.6543873 127 5 0.892328 92 4 0.888889 138 9 0.7817567 176 10 0.803175 42 5 0.798135 226 9 0.1935314 231 8 0.4208845 230 8 0.5481203 161 4 0.7933549 145 8 0.652177 177 8 0.8889557 0.8775664 0.8545519 0.7173461 0.9197324 0.877495 0.9238331 0.930137 0.8719489 0.9282550 0.9077438 0.771377 0.914510 0.8306634 0.8052357 0.0398551 0.9307065 0.8835469 0.8500514 0.9003855 0.8797878 0.7020319 0.850738 0.6271222 0.7894022 0.873239 0.9145309 0.756438 0.9069582 0.936614 0.9362416 0.919864 0.6602189 0.8975874 0.8915215 0.75903959 0.794686 0.839065 0.2952692 0.4074995 0.3973112 0.7007824 0.4712505 3 0.868632 0.869014 7.3503e-04 5 0.905403 0.862188 0.04321542 5.5109e-01 9.7771e-01 insignificant 1.000000 1.000000 insignificant 0.5942861 9.9071e-01 insignificant 1 1.000000 insignificant 2.7117e-02 0.59609416 lowCoverage 1.00000 lowCoverage 0.868632 0.7900000 0.0654380 5 0.905403 0.7735478 1.3186e-01 1.2195e-02 9.9151e-01 weaklyHypermeth 6.6876e-02 1.0000e+00 weaklyHypermeth 6.6630e-02 9.1998e-01 insignificant 3.9953e-01 1.0000e+00 insignificant 3.5061e-02 5.1415e-01 lowCoverage 1.0000e+00 lowCoverage 0.867853 0.4597458 0.4284859 5 0.895944 0.485293 0.41065111 5.6865e-26 1.0000e+00 hypermethylated 5.6865e-23 1.0000000 hypermethylated 2.7481e-09 1.0000e+00 hypermethylated 9.1605e-07 1.000000 hypermethylated 0.31655884 3.2462e-02 lowCoverage 5.6951e-01 lowCoverage 0.869014 0.7900000 0.06715424 5 0.862188 0.7735478 0.0886402 2.0681e-01 7.5813e-01 insignificant 8.6897e-01 1.0000e+00 insignificant 3.8168e-01 7.4452e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00794419 8.7150e-01 lowCoverage 1.0000e+00 lowCoverage 0.867991 0.4597458 4.3249e-01 5 0.848407 0.485293 3.6311e-01 1.8445e-18 1.0000e+00 hypermethylated 9.2224e-16 1.0000e+00 hypermethylated 4.7583e-08 0.99999556 hypermethylated 1.1896e-05 1.00000 hypermethylated 0.28944225 4.4550e-02 lowCoverage 0.873538 lowCoverage 0.791139 0.4597458 0.3343890 8 0.7809025 0.485293 0.2956100 1.4443e-10 1.0000e+00 hypermethylated 7.2215e-08 1.0000e+00 hypermethylated 1.5316e-05 1.0000e+00 hypermethylated 0.0053571 1.0000e+00 hypermethylated 0.28149806 4.8634e-02 weaklyHypermeth 3.7995e-01 insignificant chr22 36852696 36853696 57066 BAIAP2L2 ENSG00000128298 0.8757939 163 5 0.8348283 215 5 0.883952 88 6 0.7520350 122 5 0.7987701 97 5 0.801356 154 5 0.928419 57 6 0.734982 172 5 0.900511 89 5 0.871200 124 5 0.8306085 300 6 0.7800000 16 2 0.8576237 190 5 0.9086626 144 6 0.9014721 118 5 0.5946970 23 2 0.3333333 3 0 0.7747715 104 2 0.879445 270 5 0.729630 218 5 0.7823129 87 5 0.564792 94 5 0.804830 121 5 0.5857008 53 6 0.6352339 59 5 0.912929 338 5 0.801949 129 5 0.652083 27 3 0.771244 226 5 0.860030 358 5 0.7397596 336 5 0.836995 198 5 0.6831485 148 5 0.845599 248 5 0.736525 357 5 0.7500000 13 0 0.633523 56 5 0.784461 369 5 0.7700575 98 5 0.4905303 135 5 0.6199324 72 2 0.5980962 105 2 0.846591 101 5 0.8048802 0.7312110 0.7819447 0.6884991 0.7265775 0.874221 0.9128534 0.768518 0.8469496 0.8259482 0.7816590 0.721538 0.875626 0.8638596 0.9019219 0.6346914 NA 0.7347070 0.8479923 0.8718427 0.8461538 0.6604690 0.812115 0.7951923 0.7879555 0.825600 0.7780986 0.772179 0.7566269 0.809481 0.7949195 0.786139 0.6449821 0.7031968 0.5419170 0.64038462 0.810256 0.546488 0.6645778 0.5488782 0.5213098 0.6284261 0.6885490 2 0.821053 0.822628 6.8506e-03 5 0.759606 0.606480 0.15312567 2.5007e-01 9.1860e-01 insignificant 1.000000 1.000000 insignificant 0.4016651 9.9965e-01 insignificant 1 1.000000 insignificant 5.2950e-02 0.24254508 lowCoverage 1.00000 lowCoverage 0.821200 0.6831933 0.1642607 5 0.765609 0.6238031 1.4181e-01 6.2780e-07 3.2527e-01 weaklyHypermeth 6.1549e-06 1.0000e+00 weaklyHypermeth 1.1156e-01 4.7654e-01 insignificant 6.1435e-01 1.0000e+00 insignificant 5.9729e-02 1.8418e-01 lowCoverage 1.0000e+00 lowCoverage 0.819857 0.5784314 0.2099804 3 0.806807 0.607869 0.19893725 2.5942e-03 9.8989e-01 lowCoverage 6.6517e-02 1.0000000 lowCoverage 1.0846e-01 9.9379e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 0.13356306 1.0727e-01 lowCoverage 1.0000e+00 lowCoverage 0.823062 0.6826196 0.13464869 5 0.642693 0.5544917 0.0882015 6.1667e-04 5.1452e-01 weaklyHypermeth 4.4048e-03 1.0000e+00 weaklyHypermeth 4.1707e-01 3.9185e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00677896 8.8066e-01 lowCoverage 1.0000e+00 lowCoverage 0.826779 0.5795678 1.9553e-01 3 0.705385 0.607869 9.7516e-02 7.9909e-04 9.5831e-01 lowCoverage 2.1597e-02 1.0000e+00 lowCoverage 1.2977e-01 0.85055896 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.08061349 3.0043e-01 lowCoverage 1.000000 lowCoverage 0.684078 0.5793651 -0.0193885 3 0.6652988 0.669509 -0.0042101 1.4267e-01 5.9577e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 4.8946e-01 8.7533e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage 0.07383453 3.3684e-01 lowCoverage 1.0000e+00 lowCoverage chr22 36897496 36898496 57071 BAIAP2L2 ENSG00000128298 1.0000000 59 5 0.8577884 97 5 0.635426 219 5 0.8333333 70 5 0.8773148 115 5 0.945833 250 5 0.920860 141 5 0.850132 114 5 0.763889 121 5 0.833333 53 4 0.9432345 263 5 0.7216357 75 5 0.8609972 108 5 0.9209790 101 5 0.9448478 251 5 0.9861111 45 5 0.5046296 79 2 0.9043478 104 5 0.920744 132 5 0.908718 71 5 0.7034897 82 5 0.960784 73 5 0.873872 121 5 0.7351474 87 6 0.8796296 40 4 0.948509 191 5 0.937626 53 5 0.867857 38 5 0.739200 67 6 0.953256 234 5 0.8704501 211 5 0.952576 213 5 0.7521870 224 5 0.582690 84 5 0.598044 192 5 0.7333333 7 0 0.704856 142 5 0.746429 148 5 0.9652778 86 5 1.0000000 70 5 0.9833333 40 5 1.0000000 33 5 0.928904 115 5 1.0000000 0.8599523 0.7875508 1.0000000 0.9558365 0.930797 0.9262112 0.922814 0.9171348 0.9480337 0.9254335 0.865666 0.930141 0.9192268 0.9356702 0.9882959 NA 0.8964338 0.8916010 0.8890571 0.8399152 0.9484468 0.875962 0.9184591 0.9550562 0.951646 0.9322438 0.971910 0.7592651 0.958741 0.9234088 0.943094 0.7295236 0.5677919 0.5957981 0.72846442 0.639812 0.729936 0.9603620 1.0000000 0.9882959 1.0000000 0.9171054 4 0.898703 0.913475 -1.9037e-02 5 0.777623 0.798533 -0.02091089 9.0663e-01 2.4230e-01 insignificant 1.000000 1.000000 insignificant 0.9007510 5.2261e-01 insignificant 1 1.000000 insignificant -1.1825e-02 0.75930091 lowCoverage 1.00000 lowCoverage 0.898703 0.6649937 0.2358847 5 0.777623 0.7210817 5.6541e-02 2.7961e-11 9.5779e-01 hypermethylated 3.8835e-10 1.0000e+00 hypermethylated 9.0242e-04 9.6780e-01 hypermethylated 9.7034e-03 1.0000e+00 hypermethylated 1.7045e-01 1.1066e-03 lowCoverage 1.8141e-02 lowCoverage 0.899756 0.9593023 -0.0651810 5 0.865560 0.966666 -0.10110668 9.9996e-01 3.3028e-04 weaklyHypometh 1.0000e+00 0.0366982 weaklyHypometh 1.0000e+00 1.1842e-04 weaklyHypometh 1.0000e+00 0.019737 weaklyHypometh -0.11879536 6.6418e-04 lowCoverage 4.7442e-02 lowCoverage 0.913475 0.6649937 0.25403936 5 0.798533 0.7210817 0.0774517 7.2304e-09 9.6902e-01 hypermethylated 1.0329e-07 1.0000e+00 hypermethylated 1.2476e-03 9.7275e-01 weaklyHypermeth 1.3963e-02 1.0000e+00 weaklyHypermeth 0.18227654 7.9182e-04 lowCoverage 1.3652e-02 lowCoverage 0.915895 0.9593023 -4.2845e-02 5 0.860194 0.966666 -1.0647e-01 9.9941e-01 1.1797e-03 weaklyHypometh 1.0000e+00 1.3108e-01 insignificant 1.0000e+00 0.00034990 weaklyHypometh 1.0000e+00 0.10939 insignificant -0.10696994 2.9520e-03 weaklyHypometh 0.184502 insignificant 0.664573 0.9593023 -0.2767993 5 0.6745953 0.966666 -0.2920710 1.0000e+00 1.6392e-06 hypomethylated 1.0000e+00 2.5612e-05 hypomethylated 1.0000e+00 1.7268e-05 hypomethylated 1.0000000 5.7560e-04 hypomethylated -0.28924648 7.5527e-05 lowCoverage 4.0637e-03 lowCoverage chr22 36921196 36922196 57077 PLA2G6 ENSG00000184381 0.8061379 459 13 0.7889521 445 14 0.857162 288 13 0.7071161 454 13 0.8020090 224 13 0.819423 759 13 0.740623 241 14 0.840019 397 13 0.824662 254 13 0.870473 296 13 0.7255968 574 14 0.7746659 131 9 0.7980702 360 13 0.8017180 236 12 0.7702306 264 12 0.7288889 77 5 0.7368465 155 7 0.7841374 541 12 0.833529 311 7 0.770819 458 13 0.7121956 135 13 0.819205 146 7 0.748666 290 10 0.7905622 205 12 0.7789662 162 11 0.826198 594 14 0.773776 188 13 0.778760 144 10 0.802575 284 13 0.775702 699 14 0.8101162 574 14 0.772218 630 14 0.7039913 391 13 0.554500 163 9 0.789807 610 13 0.8666667 87 8 0.682867 271 13 0.629472 484 13 0.7764331 378 13 0.8121287 426 13 0.7340045 424 13 0.8208297 310 13 0.793969 359 14 0.8327206 0.8212468 0.8157569 0.8429793 0.8141379 0.858524 0.7932724 0.880331 0.7629160 0.8635732 0.8616816 0.801763 0.858996 0.8525986 0.7853446 0.8777547 0.8375180 0.8324170 0.9086900 0.8460446 0.7907458 0.8214427 0.837770 0.8872565 0.8741190 0.856439 0.7722363 0.810639 0.8381918 0.872263 0.8615030 0.823199 0.7340086 0.6421242 0.7669496 0.85343035 0.779583 0.633321 0.8537606 0.8758177 0.8267776 0.8299984 0.8395177 5 0.850809 0.857990 -5.1220e-03 13 0.764255 0.778886 -0.01463047 6.8529e-01 7.6054e-01 insignificant 1.000000 1.000000 insignificant 0.8842602 9.0652e-01 insignificant 1 1.000000 insignificant 6.6424e-03 0.62883872 insignificant 1.00000 insignificant 0.851369 0.7637089 0.0887308 13 0.767180 0.6945250 7.2655e-02 1.9109e-07 1.8791e-01 weaklyHypermeth 1.9499e-06 1.0000e+00 weaklyHypermeth 1.7002e-04 4.6973e-01 weaklyHypermeth 2.2682e-03 1.0000e+00 weaklyHypermeth 8.4503e-02 1.2439e-01 insignificant 8.1299e-01 insignificant 0.852971 0.8550343 -0.0125578 13 0.779301 0.734981 0.04432016 1.9927e-01 5.2184e-02 insignificant 1.0000e+00 0.7562839 insignificant 3.3154e-01 1.5781e-01 insignificant 1.0000e+00 1.000000 insignificant 0.00158101 9.3381e-01 insignificant 1.0000e+00 insignificant 0.858313 0.7637089 0.09227533 13 0.734884 0.6945250 0.0403595 9.3086e-04 6.3012e-01 weaklyHypermeth 6.4197e-03 1.0000e+00 weaklyHypermeth 2.5545e-02 8.4115e-01 weaklyHypermeth 1.7740e-01 1.0000e+00 insignificant 0.07786106 1.4995e-01 insignificant 8.7688e-01 insignificant 0.858987 0.8550343 -7.0085e-03 13 0.801551 0.734981 6.6570e-02 8.4729e-01 3.7172e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.4269e-01 0.79065916 insignificant 1.0000e+00 1.00000 insignificant -0.00506138 7.8522e-01 insignificant 1.000000 insignificant 0.765117 0.8554852 -0.0980763 13 0.7298482 0.787479 -0.0576310 5.0919e-01 1.1291e-02 weaklyHypometh 1.0000e+00 7.5276e-02 weaklyHypometh 7.2740e-01 2.6991e-02 weaklyHypometh 1.0000000 2.0448e-01 insignificant -0.08292244 1.3431e-01 insignificant 7.1442e-01 insignificant chr22 36991896 36992896 57082 TMEM184B ENSG00000198792 0.8902462 278 6 0.7381748 158 8 0.605246 102 6 0.7564419 132 5 0.7411859 44 4 0.790251 295 8 0.767355 105 7 0.646054 114 7 0.677065 78 2 0.619565 48 2 0.8696570 313 8 0.7729167 59 4 0.8618708 113 5 0.7150000 32 3 0.8486111 71 5 0.5803030 28 2 0.9000000 18 2 0.8695175 91 5 0.691446 106 6 0.781156 212 8 0.9081633 52 4 0.917460 57 2 0.825435 132 5 0.8261905 78 4 0.8945869 37 2 0.632194 207 8 0.519048 96 2 0.964815 54 2 0.845014 102 5 0.781307 200 8 0.7239213 192 8 0.748839 288 8 0.7082011 111 6 0.716855 97 5 0.515104 137 7 0.7356643 34 2 0.744573 151 8 0.850682 165 8 0.8188348 279 8 0.8351472 274 8 0.7519072 148 5 0.7536737 130 5 0.861348 203 8 0.8980936 0.8513918 0.6449656 0.8374056 0.8363095 0.793822 0.7915869 0.714208 0.7556289 0.7452899 0.8814073 0.845387 0.869538 0.7453260 0.9291667 0.7340368 0.8202381 0.8365288 0.8691327 0.8653928 0.8961049 0.8777778 0.809005 0.8854082 0.8951543 0.918237 0.6707648 0.868370 0.7690081 0.835134 0.8644953 0.832585 0.8528401 0.6256856 0.6827083 0.81017316 0.769613 0.873484 0.8763810 0.8649937 0.8700124 0.8610309 0.8587027 2 0.816437 0.821405 -2.8854e-03 8 0.757234 0.721711 0.03552247 8.3124e-01 5.8732e-01 insignificant 1.000000 1.000000 insignificant 0.9650422 2.8247e-01 insignificant 1 1.000000 insignificant -4.2811e-02 0.33255183 lowCoverage 1.00000 lowCoverage 0.816284 0.7338129 0.0789999 8 0.735164 0.6711117 6.4052e-02 5.0971e-02 7.5182e-01 insignificant 2.5109e-01 1.0000e+00 insignificant 4.0488e-01 7.0962e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.4257e-02 4.0063e-01 insignificant 1.0000e+00 insignificant 0.816736 0.8617021 -0.0262591 8 0.750385 0.840163 -0.08977790 8.2693e-01 7.0362e-02 insignificant 1.0000e+00 0.8663571 insignificant 8.3624e-01 9.9989e-02 insignificant 1.0000e+00 1.000000 insignificant -0.04807893 1.4619e-01 insignificant 1.0000e+00 insignificant 0.821165 0.7338129 0.08636227 8 0.696412 0.6711117 0.0253004 2.3403e-02 9.2491e-01 weaklyHypermeth 1.2002e-01 1.0000e+00 insignificant 5.0760e-02 7.6208e-01 insignificant 3.1141e-01 1.0000e+00 insignificant 0.08706792 1.5942e-01 lowCoverage 9.2150e-01 lowCoverage 0.822028 0.8617021 -2.2740e-02 8 0.740059 0.840163 -1.0010e-01 8.5677e-01 1.9774e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.8591e-01 0.44430395 insignificant 1.0000e+00 1.00000 insignificant -0.00526762 9.0431e-01 lowCoverage 1.000000 lowCoverage 0.734488 0.8617021 -0.1033096 8 0.7091365 0.840163 -0.1310268 9.8385e-01 6.3458e-02 insignificant 1.0000e+00 3.2377e-01 insignificant 8.7610e-01 2.8942e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.09233554 1.0462e-01 insignificant 6.2260e-01 insignificant chr22 37025796 37026796 57086 TMEM184B ENSG00000198792 0.9551887 674 14 0.9131732 253 14 0.815805 320 14 0.9445045 596 14 0.9392655 234 14 0.960290 834 14 0.860369 365 14 0.860509 336 14 0.837943 391 14 0.941105 350 14 0.9590904 443 14 0.8769475 191 14 0.9079173 364 14 0.9519360 148 9 0.9431508 390 14 0.8299595 140 11 0.8660941 311 11 0.9386518 685 14 0.928728 407 14 0.944924 665 14 0.8309938 225 14 0.841692 245 13 0.903617 350 14 0.8850000 250 14 0.8977051 229 12 0.942323 362 14 0.918556 439 14 0.927440 342 14 0.948114 344 14 0.959599 389 14 0.9517119 391 14 0.877452 763 14 0.9108867 299 14 0.907291 307 13 0.536364 75 4 0.8500764 194 12 0.785701 417 14 0.935233 346 14 0.9463220 670 14 0.9347895 669 14 0.9489809 485 14 0.9204402 529 14 0.904665 770 14 0.9556261 0.9060966 0.9277700 0.9440058 0.9452501 0.962016 0.8754048 0.921927 0.9024767 0.9299540 0.9577236 0.863859 0.968451 0.9500875 0.9331954 0.8601845 0.8868629 0.9351133 0.9302250 0.9500990 0.8304546 0.9031153 0.959263 0.9017840 0.9131239 0.941882 0.9105148 0.908378 0.9515928 0.965303 0.9568328 0.932288 0.8943599 0.8977589 0.7804895 0.83580622 0.816763 0.896191 0.9485670 0.9317449 0.9450562 0.9302207 0.9625085 13 0.938975 0.924890 9.4323e-03 14 0.821904 0.862771 -0.04086683 2.8751e-01 5.9501e-01 insignificant 1.000000 1.000000 insignificant 0.4483510 4.8355e-01 insignificant 1 1.000000 insignificant 1.7606e-03 0.91462986 insignificant 1.00000 insignificant 0.939106 0.8559219 0.0769740 14 0.884404 0.8517362 3.2668e-02 3.7696e-04 6.7473e-01 weaklyHypermeth 2.6546e-03 1.0000e+00 weaklyHypermeth 2.0107e-01 4.3638e-01 insignificant 9.9539e-01 1.0000e+00 insignificant 8.7852e-02 2.1206e-01 insignificant 1.0000e+00 insignificant 0.938975 0.9545163 -0.0030485 14 0.821904 0.888381 -0.06647682 9.2391e-01 2.6701e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.5746e-01 6.8063e-02 insignificant 1.0000e+00 1.000000 insignificant -0.02226180 1.1789e-01 insignificant 1.0000e+00 insignificant 0.925104 0.8563570 0.06713082 14 0.920289 0.8751853 0.0451038 3.9861e-02 8.9735e-01 weaklyHypermeth 1.9350e-01 1.0000e+00 insignificant 2.5059e-01 7.7911e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.08609163 2.2093e-01 insignificant 1.0000e+00 insignificant 0.924925 0.9545309 -1.2817e-02 14 0.870843 0.894947 -2.4104e-02 9.9872e-01 2.9442e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8742e-01 0.35623922 insignificant 1.0000e+00 1.00000 insignificant -0.02402241 1.2521e-01 insignificant 1.000000 insignificant 0.856357 0.9548222 -0.0770907 14 0.8751853 0.947606 -0.0724211 8.3337e-01 2.2420e-02 weaklyHypometh 1.0000e+00 1.3425e-01 insignificant 8.7091e-01 1.5976e-01 insignificant 1.0000000 8.3209e-01 insignificant -0.11011404 1.3168e-01 insignificant 7.0797e-01 insignificant chr22 37061696 37062696 57088 CSNK1E ENSG00000213923 0.2360351 577 21 0.1454751 684 20 0.086429 780 20 0.3160856 320 16 0.1622214 355 16 0.286712 836 20 0.149648 666 17 0.169064 581 17 0.210341 636 16 0.166870 600 17 0.2096735 584 17 0.1601819 439 15 0.1677069 654 17 0.9000000 10 2 0.1478599 562 17 0.0859908 355 16 0.2385895 1079 18 0.1985316 379 18 0.172616 423 16 0.257093 745 19 0.1616246 176 16 0.171941 250 15 0.140091 738 21 0.1182647 335 17 0.1655208 160 11 0.214190 779 22 0.140702 329 17 0.214282 165 16 0.152072 496 16 0.184271 847 22 0.1600666 895 22 0.189017 935 21 0.1702286 667 20 0.154412 383 16 0.254400 485 13 0.1427807 156 8 0.184006 201 17 0.238586 640 22 0.2361402 542 19 0.2080993 717 19 0.2470088 407 16 0.2365267 600 18 0.224723 462 17 0.1721559 0.1574220 0.0919496 0.1830906 0.1734286 0.188774 0.1604419 0.168095 0.1588640 0.1786239 0.1601028 0.168499 0.161936 NA 0.1655080 0.1056933 0.1916382 0.1697155 0.1721093 0.1765184 0.1738186 0.1646470 0.154243 0.1228990 0.1756140 0.186304 0.1536206 0.157654 0.1451712 0.167737 0.1537374 0.164158 0.1899364 0.1693242 0.2023092 0.17556375 0.171430 0.188968 0.1680118 0.1780138 0.1824005 0.1420243 0.1841194 10 0.173546 0.140868 1.5049e-02 19 0.247969 0.180626 0.06734261 1.6768e-03 9.9049e-01 weaklyHypermeth 0.638853 1.000000 insignificant 0.0116960 9.9413e-01 weaklyHypermeth 1 1.000000 insignificant 5.5686e-02 0.16684765 insignificant 1.00000 insignificant 0.173546 0.1785150 -0.0119085 17 0.247969 0.2305663 1.7402e-02 5.5328e-01 3.1056e-05 weaklyHypometh 1.0000e+00 4.4365e-03 weaklyHypometh 4.7446e-01 2.0011e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.2621e-02 4.4796e-01 insignificant 1.0000e+00 insignificant 0.173546 0.2408358 0.0094149 18 0.247969 0.234408 0.01356105 2.7764e-01 9.2018e-02 insignificant 1.0000e+00 0.9894427 insignificant 6.9128e-01 5.9322e-01 insignificant 1.0000e+00 1.000000 insignificant -0.00714343 8.5475e-01 insignificant 1.0000e+00 insignificant 0.140868 0.1785150 -0.02731297 18 0.180626 0.2305663 -0.0499403 9.7065e-01 1.4525e-05 weaklyHypometh 1.0000e+00 2.9051e-03 weaklyHypometh 8.7205e-01 3.9573e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -0.02306531 2.9612e-01 insignificant 1.0000e+00 insignificant 0.140868 0.2408358 -1.4330e-02 18 0.180626 0.234408 -5.3782e-02 9.9499e-01 2.0539e-02 weaklyHypometh 1.0000e+00 7.7711e-01 insignificant 9.9536e-01 0.09150297 insignificant 1.0000e+00 1.00000 insignificant -0.06282944 4.0408e-05 weaklyHypometh 0.020204 weaklyHypometh 0.178515 0.2408358 0.0171957 16 0.2305663 0.234408 -0.0038413 7.2394e-02 9.5875e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.4915e-01 8.6173e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.03976414 8.9507e-02 insignificant 5.7376e-01 insignificant chr22 37187596 37188596 57091 KCNJ4 ENSG00000168135 0.1308770 736 15 0.1639161 584 17 0.176855 571 15 0.1400531 516 17 0.1842729 607 17 0.214022 1111 15 0.152365 554 17 0.287684 442 17 0.127565 538 15 0.100922 678 15 0.1724770 624 17 0.0627692 529 15 0.0074125 439 17 0.1197013 516 18 0.0923968 825 17 0.1219008 381 16 0.0060976 83 2 0.0689484 1134 15 0.066874 806 15 0.148223 772 15 0.1154412 366 16 0.150000 132 9 0.099709 613 17 0.1357143 289 19 0.0313246 197 13 0.140265 1043 17 0.095208 1058 16 0.062342 322 15 0.027514 775 15 0.153800 888 17 0.1021399 874 17 0.144365 746 17 0.0969080 502 15 0.085304 727 15 0.079176 562 13 0.0000000 100 9 0.149496 481 17 0.211491 1084 15 0.2218606 880 18 0.2279614 813 17 0.1937509 498 17 0.0017553 1591 17 0.237172 620 17 0.0087985 0.0096430 0.0093672 0.0056201 0.0126553 0.013820 0.0103992 0.011567 0.0044058 0.0098174 0.0044390 0.014462 0.010961 0.0135146 0.0087344 0.0082975 NA 0.0010675 0.0084085 0.0071711 0.0050393 0.0000000 0.014451 0.0085669 0.0363541 0.012444 0.0039165 0.013949 0.0096745 0.014131 0.0059930 0.023930 0.0016798 0.0023802 0.0010844 0.00316609 0.013351 0.012118 0.0038381 0.0012980 0.0041010 0.0017742 0.0031540 15 0.022101 0.029166 -3.0620e-03 15 0.194131 0.133326 0.06080564 9.9872e-01 9.6193e-01 insignificant 1.000000 1.000000 insignificant 0.9757041 9.9994e-01 insignificant 1 1.000000 insignificant 2.2448e-02 0.26467286 insignificant 1.00000 insignificant 0.020774 0.0162037 0.0024010 15 0.208615 0.2074984 1.1166e-03 4.8211e-01 9.2375e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.7461e-01 9.9982e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.3537e-02 4.9348e-01 insignificant 1.0000e+00 insignificant 0.020767 0.0358928 0.0059868 15 0.192941 0.236581 -0.04363948 6.3064e-02 9.7287e-01 insignificant 8.9860e-01 1.0000000 insignificant 1.3607e-01 9.9771e-01 insignificant 1.0000e+00 1.000000 insignificant -0.04923336 3.4099e-01 insignificant 1.0000e+00 insignificant 0.028505 0.0159190 0.00544857 15 0.121828 0.1801708 -0.0583431 2.8313e-01 1.0000e+00 insignificant 1.0000e+00 1.0000e+00 insignificant 5.6463e-01 9.9939e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00108928 9.7365e-01 insignificant 1.0000e+00 insignificant 0.029197 0.0358928 9.7009e-03 15 0.187167 0.236581 -4.9414e-02 1.0278e-02 9.9878e-01 weaklyHypermeth 1.8687e-01 1.0000e+00 insignificant 1.7103e-01 0.99804725 insignificant 1.0000e+00 1.00000 insignificant -0.07168147 1.8454e-01 insignificant 1.000000 insignificant 0.015702 0.0322065 0.0048014 15 0.2011882 0.177263 0.0239250 8.3619e-01 9.9976e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9139e-01 9.9999e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.07277075 2.1134e-01 insignificant 9.9222e-01 insignificant chr22 37690096 37691096 57113 APOBEC3A ENSG00000128383 0.9141036 277 7 0.7754640 206 7 0.839396 206 7 0.9214866 178 7 0.8574189 107 7 0.855346 386 7 0.867780 221 7 0.898811 174 7 0.894926 165 7 0.982143 75 5 0.9084819 280 7 0.8911738 114 7 0.9206787 158 7 0.9714286 71 4 0.9063859 176 7 0.8805556 68 5 0.8560049 52 3 0.8833122 199 7 0.909394 195 7 0.911904 398 7 0.8925228 137 7 0.845166 72 5 0.920567 251 7 0.7644194 136 7 0.9780220 39 3 0.892512 129 7 0.851169 141 7 0.933808 132 7 0.908806 130 7 0.879441 279 7 0.8995090 242 7 0.871970 449 7 0.7439525 200 7 0.619346 167 7 0.272115 49 2 0.6791919 105 5 0.797855 234 7 0.596559 327 7 0.9060791 358 7 0.9145303 365 7 0.9369048 180 7 0.8558918 219 7 0.916002 206 7 0.9090498 0.7735893 0.8446907 0.9331390 0.8309304 0.859978 0.8748774 0.903220 0.8700413 0.9774811 0.8918197 0.882273 0.927294 0.9263941 0.9094943 0.8501978 0.8849326 0.8973811 0.9256194 0.9118726 0.8762054 0.8694248 0.921725 0.8972387 0.9800846 0.897237 0.8352672 0.935835 0.9238949 0.882791 0.9017588 0.879496 0.7525895 0.6040307 0.4355256 0.69407157 0.813643 0.636486 0.9102258 0.9002667 0.9396023 0.8479639 0.9014732 5 0.890178 0.895082 -7.5659e-03 7 0.887590 0.888859 -0.00126908 4.1851e-01 1.0176e-01 insignificant 1.000000 1.000000 insignificant 0.6870974 1.0822e-01 insignificant 1 1.000000 insignificant 5.8170e-03 0.75357080 insignificant 1.00000 insignificant 0.890178 0.6709797 0.2005422 7 0.887590 0.6801887 2.0740e-01 5.3718e-22 1.0000e+00 hypermethylated 1.4922e-20 1.0000e+00 hypermethylated 1.7735e-10 1.0000e+00 hypermethylated 6.8210e-09 1.0000e+00 hypermethylated 2.7414e-01 1.4820e-02 weaklyHypermeth 1.4820e-01 insignificant 0.890178 0.9028614 -0.0160264 7 0.887590 0.902829 -0.01523842 9.0090e-01 7.1409e-02 insignificant 1.0000e+00 0.8663571 insignificant 7.5689e-01 1.3514e-01 insignificant 1.0000e+00 1.000000 insignificant -0.01357184 4.4113e-01 insignificant 1.0000e+00 insignificant 0.895082 0.6709797 0.21007114 7 0.888859 0.6801887 0.2086708 2.9427e-17 1.0000e+00 hypermethylated 7.7439e-16 1.0000e+00 hypermethylated 1.5046e-09 1.0000e+00 hypermethylated 6.2690e-08 1.0000e+00 hypermethylated 0.26832287 1.5658e-02 weaklyHypermeth 1.5930e-01 insignificant 0.895082 0.9028614 -8.3773e-03 7 0.888859 0.902829 -1.3969e-02 5.2130e-01 9.4919e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 2.5379e-01 0.28416509 insignificant 1.0000e+00 1.00000 insignificant -0.01938882 3.5801e-01 insignificant 1.000000 insignificant 0.670980 0.9028614 -0.2267775 7 0.6801887 0.902829 -0.2226401 1.0000e+00 3.2659e-09 hypomethylated 1.0000e+00 7.7759e-08 hypomethylated 1.0000e+00 1.0848e-07 hypomethylated 1.0000000 8.3449e-06 hypomethylated -0.28771169 1.2007e-02 weaklyHypometh 1.4294e-01 insignificant chr22 37900396 37901396 57119 ENSG00000218071 0.0086835 199 5 0.0098413 173 5 0.023718 185 5 0.0083333 203 4 0.0045455 162 5 0.050448 313 5 0.000000 191 5 0.039568 152 5 0.018526 249 5 0.026757 211 5 0.0068966 134 5 0.0639592 172 5 0.0000000 203 5 0.0119048 61 3 0.0238421 195 5 0.0000000 114 5 0.0107143 189 5 0.0038462 228 4 0.033563 86 5 0.011849 229 5 0.0222222 98 5 0.033810 143 5 0.063930 155 5 0.0000000 98 5 0.0000000 99 5 0.000000 179 5 0.016667 156 5 0.152688 103 4 0.025762 139 5 0.012481 210 5 0.0090909 192 5 0.020748 247 5 0.0000000 149 5 0.042424 92 5 0.000000 1 0 0.0000000 61 5 0.033111 91 4 0.030769 142 5 0.0019231 244 5 0.0108108 234 5 0.0378882 188 5 0.0000000 257 5 0.022829 229 5 0.0083594 0.0133300 0.0205565 0.0095986 0.0045217 0.028598 0.0000000 0.024232 0.0127969 0.0339249 0.0079437 0.066135 0.000000 0.0156746 0.0294126 0.0000000 0.0099476 0.0044301 0.0315821 0.0073809 0.0075625 0.0173024 0.042356 0.0000000 0.0000000 0.000000 0.0056719 0.119096 0.0284075 0.009128 0.0030938 0.013100 0.0000000 0.0180073 NA 0.00000000 0.025284 0.010471 0.0034233 0.0107542 0.0206985 0.0000000 0.0208397 5 0.016169 0.014843 2.1946e-03 5 0.019568 0.020496 -0.00092844 3.0539e-01 6.2459e-01 insignificant 1.000000 1.000000 insignificant 0.3556473 3.9653e-01 insignificant 1 1.000000 insignificant -1.1933e-02 0.37223712 lowCoverage 1.00000 lowCoverage 0.016169 0.0130597 0.0040077 5 0.019568 0.0191959 3.7188e-04 2.1518e-01 5.9450e-01 insignificant 9.0033e-01 1.0000e+00 insignificant 1.7638e-01 7.0984e-01 insignificant 8.9534e-01 1.0000e+00 insignificant 1.3245e-04 9.8862e-01 lowCoverage 1.0000e+00 lowCoverage 0.016169 0.0095486 0.0049548 5 0.019568 0.013805 0.00576302 1.0627e-01 5.2453e-01 insignificant 1.0000e+00 1.0000000 insignificant 1.8676e-01 4.9125e-01 insignificant 1.0000e+00 1.000000 insignificant 0.00315963 7.0800e-01 lowCoverage 1.0000e+00 lowCoverage 0.014843 0.0130597 0.00241202 5 0.020496 0.0191959 0.0013003 4.9033e-01 6.5516e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.9319e-01 8.4335e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01206582 4.2463e-01 lowCoverage 1.0000e+00 lowCoverage 0.014843 0.0095486 1.9446e-03 5 0.020496 0.013805 6.6915e-03 2.2637e-01 2.1163e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.2892e-01 0.32502661 insignificant 1.0000e+00 1.00000 insignificant 0.01509300 3.0446e-01 lowCoverage 1.000000 lowCoverage 0.013060 0.0095486 0.0006005 5 0.0191959 0.013805 0.0053911 6.1705e-01 7.6698e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.3091e-01 6.9568e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.00302717 7.8432e-01 lowCoverage 1.0000e+00 lowCoverage chr22 37905196 37906196 57120 ENSG00000218071 0.5079994 357 7 0.3846029 223 5 0.646998 154 7 0.5027424 372 7 0.6670139 82 6 0.621511 408 7 0.595321 115 5 0.530713 218 7 0.523473 172 7 0.621192 151 7 0.6968127 313 7 0.4435078 56 3 0.4728692 206 7 0.5160145 71 3 0.5088818 152 5 0.4415766 37 3 0.4599597 77 3 0.5974435 672 7 0.478041 305 5 0.345764 368 7 0.6367668 130 6 0.412596 195 7 0.625097 158 7 0.5375354 88 7 0.5291438 161 7 0.549324 296 7 0.398928 265 7 0.395370 82 7 0.563259 303 5 0.549421 306 7 0.4242929 331 7 0.627493 310 7 0.3035655 239 7 0.277961 283 5 0.200000 111 3 0.3023810 75 4 0.446826 119 7 0.238369 349 7 0.2672954 302 5 0.4552365 360 7 0.4853561 435 5 0.5047214 363 5 0.384455 324 7 0.5499500 0.4724634 0.6856391 0.6076257 0.6000909 0.687161 0.6420914 0.543152 0.5502868 0.6908209 0.7304286 0.560769 0.520719 0.6545308 0.5273236 0.5063784 0.5154887 0.5925692 0.4585807 0.4006430 0.7347882 0.4685533 0.709492 0.6042965 0.6307261 0.606494 0.5952390 0.627554 0.5777815 0.597779 0.4793270 0.665595 0.3526666 0.2642096 0.2564195 0.17033435 0.548346 0.180996 0.3220284 0.4234590 0.4246121 0.5211592 0.4425147 5 0.531382 0.546356 -4.0675e-02 7 0.606811 0.475911 0.13089962 7.8081e-01 1.5992e-01 insignificant 1.000000 1.000000 insignificant 0.7502989 1.0109e-01 insignificant 1 1.000000 insignificant 7.3530e-03 0.82904800 insignificant 1.00000 insignificant 0.531382 0.2697872 0.2487636 7 0.606811 0.3044337 3.0238e-01 4.5539e-12 9.9978e-01 hypermethylated 6.8999e-11 1.0000e+00 hypermethylated 3.8503e-06 9.9998e-01 hypermethylated 7.8577e-05 1.0000e+00 hypermethylated 2.3327e-01 2.5859e-04 hypermethylated 5.2773e-03 hypermethylated 0.531382 0.3810325 0.1472920 5 0.606811 0.407722 0.19908883 5.8117e-08 9.0095e-01 weaklyHypermeth 5.2833e-06 1.0000000 weaklyHypermeth 1.7614e-05 8.9876e-01 weaklyHypermeth 1.7614e-03 1.000000 weaklyHypermeth 0.10870897 6.3847e-02 insignificant 8.6279e-01 insignificant 0.545940 0.2695578 0.28734864 7 0.428320 0.2739903 0.1543299 5.4938e-08 9.9958e-01 hypermethylated 7.1348e-07 1.0000e+00 hypermethylated 2.4672e-05 9.9999e-01 hypermethylated 4.8376e-04 1.0000e+00 hypermethylated 0.22591846 3.0536e-04 hypermethylated 6.3617e-03 hypermethylated 0.545524 0.3806054 1.8259e-01 5 0.389382 0.333591 5.5791e-02 6.0705e-06 9.9703e-01 weaklyHypermeth 3.7941e-04 1.0000e+00 weaklyHypermeth 3.1508e-04 0.99720082 weaklyHypermeth 2.2505e-02 1.00000 weaklyHypermeth 0.10135599 8.4024e-02 insignificant 1.000000 insignificant 0.269558 0.3808188 -0.1102147 5 0.2739903 0.366950 -0.0929596 9.6486e-01 7.5028e-02 insignificant 1.0000e+00 3.6421e-01 insignificant 9.9826e-01 9.5163e-02 insignificant 1.0000000 5.4691e-01 insignificant -0.12456247 5.3827e-02 insignificant 3.9872e-01 insignificant chr22 37979296 37980296 57128 ENSG00000223020 0.5197735 263 9 0.5771903 281 12 0.645322 222 12 0.8739619 234 6 0.7131934 95 7 0.634432 259 8 0.591781 125 10 0.553509 188 11 0.560546 177 11 0.675462 95 10 0.6931332 328 11 0.5855426 186 9 0.5436134 311 11 NA 0 0 0.6509596 191 11 0.5199355 167 11 0.5962220 130 11 0.4384147 284 6 0.642671 184 11 0.677411 170 10 0.6355751 123 10 0.640245 143 6 0.650523 222 11 0.5116522 92 10 0.5266249 127 6 0.598476 392 12 0.625329 115 8 0.508018 85 10 0.591689 210 11 0.589432 432 11 0.6128528 428 12 0.755721 312 10 0.5125952 275 12 0.499690 244 11 0.577395 331 10 0.5555556 76 6 0.547578 114 10 0.551080 379 11 0.5024993 125 6 0.6953783 230 10 0.4296604 168 6 0.6504116 213 6 0.586422 284 10 0.7825773 0.7870708 0.8055719 0.8152221 0.9235313 0.814440 0.7378069 0.787349 0.7834991 0.8430168 0.7915631 0.743056 0.801199 NA 0.8325000 0.6106210 0.7699725 0.7372496 0.8653497 0.8545076 0.8685466 0.6511945 0.846524 0.7495451 0.8266455 0.830819 0.7600558 0.772838 0.8401386 0.833758 0.8119014 0.850445 0.7732323 0.7954354 0.8817765 0.76557672 0.776144 0.838010 0.6406712 0.8458969 0.7246611 0.7685396 0.7022932 5 0.665553 0.712048 1.0892e-02 11 0.629409 0.603066 0.02634315 3.9026e-02 6.0840e-01 weaklyHypermeth 1.000000 1.000000 insignificant 0.4183835 6.3479e-01 insignificant 1 1.000000 insignificant 1.1580e-02 0.69542383 insignificant 1.00000 insignificant 0.665553 0.6934461 0.0442020 11 0.629409 0.5459917 8.3417e-02 1.4055e-08 1.3875e-01 weaklyHypermeth 1.6536e-07 1.0000e+00 weaklyHypermeth 3.1106e-04 5.1358e-01 weaklyHypermeth 3.9375e-03 1.0000e+00 weaklyHypermeth 7.4776e-02 5.7139e-03 weaklyHypermeth 6.7222e-02 weaklyHypermeth 0.665553 0.7421569 0.0536581 6 0.629409 0.601884 0.02752487 1.3461e-06 3.1437e-01 weaklyHypermeth 7.9180e-05 1.0000000 weaklyHypermeth 3.9997e-04 6.9780e-01 weaklyHypermeth 2.1051e-02 1.000000 weaklyHypermeth 0.04255067 4.5323e-01 insignificant 1.0000e+00 insignificant 0.712048 0.6934461 0.01614099 11 0.603066 0.5459917 0.0570741 7.2472e-03 6.4922e-01 weaklyHypermeth 4.1650e-02 1.0000e+00 weaklyHypermeth 1.3838e-02 7.8683e-01 weaklyHypermeth 1.0483e-01 1.0000e+00 insignificant 0.06319574 1.4874e-02 weaklyHypermeth 1.5657e-01 insignificant 0.712048 0.7421569 6.6946e-02 6 0.603066 0.601884 1.1817e-03 1.8391e-02 2.7807e-01 weaklyHypermeth 2.9662e-01 1.0000e+00 insignificant 1.9932e-02 0.53431135 weaklyHypermeth 5.5367e-01 1.00000 insignificant 0.03097056 5.7714e-01 insignificant 1.000000 insignificant 0.693446 0.7421569 0.0828828 6 0.5459917 0.601884 -0.0558923 2.0571e-02 5.7824e-04 weaklyHypermeth 1.0000e+00 5.6690e-03 weaklyHypermeth 9.2237e-02 2.3466e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.03222518 5.4871e-01 insignificant 1.0000e+00 insignificant chr22 37979896 37980896 57129 ENSG00000223020 0.8362513 240 6 0.8120097 226 7 0.854279 131 7 0.8529556 233 6 0.9666667 18 2 0.863788 238 6 0.766414 54 5 0.844371 137 6 0.820940 99 6 0.893098 51 5 0.8081556 164 6 0.7310606 52 4 0.8753430 184 6 NA 0 0 0.8641220 71 6 0.6176471 82 6 0.8095238 40 6 0.6889374 280 6 0.910895 97 6 0.909575 142 6 0.9088504 56 6 0.686993 139 6 0.862801 186 6 0.7829365 59 6 0.8821457 119 6 0.862267 267 7 0.779373 95 6 0.835913 43 6 0.900637 179 6 0.909602 293 6 0.8757547 309 7 0.870210 278 6 0.8211048 179 7 0.853599 151 6 0.961248 307 7 0.8333333 72 6 0.804886 86 6 0.933720 273 6 0.7185702 113 6 0.8604444 201 6 0.6751807 164 6 0.8315992 203 6 0.769580 254 6 0.8434437 0.8417752 0.8525190 0.8531662 0.9782609 0.859000 0.7736166 0.849629 0.8397696 0.8901186 0.8168398 0.778195 0.866253 NA 0.8750127 0.6300329 0.8170807 0.8094430 0.9168078 0.9051757 0.9181254 0.6820968 0.888664 0.8037267 0.8962665 0.889744 0.8015893 0.836801 0.9005499 0.902545 0.8668646 0.872083 0.8406988 0.8651963 0.9656063 0.83942029 0.825689 0.919804 0.6801006 0.8800208 0.7881901 0.8016738 0.7317616 5 0.837338 0.860603 -2.2312e-02 6 0.827285 0.854859 -0.02757353 9.8414e-01 1.2821e-01 insignificant 1.000000 1.000000 insignificant 0.9720775 2.4439e-01 insignificant 1 1.000000 insignificant -1.8771e-02 0.48988241 insignificant 1.00000 insignificant 0.837338 0.8941948 -0.0546945 6 0.827285 0.8832455 -5.5960e-02 9.9982e-01 4.6604e-03 weaklyHypometh 1.0000e+00 3.8836e-01 insignificant 9.7506e-01 6.1035e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -4.0296e-02 2.3842e-01 insignificant 1.0000e+00 insignificant 0.837338 0.7775401 0.0622726 6 0.827285 0.782741 0.04454412 7.3065e-07 7.4336e-01 weaklyHypermeth 5.2189e-05 1.0000000 weaklyHypermeth 1.6632e-03 6.2021e-01 weaklyHypermeth 7.5601e-02 1.000000 weaklyHypermeth 0.05661096 1.9400e-01 insignificant 1.0000e+00 insignificant 0.860603 0.8941948 -0.03235713 6 0.854859 0.8832455 -0.0283867 9.8398e-01 1.1716e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.3807e-01 2.3174e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02152508 5.2124e-01 insignificant 1.0000e+00 insignificant 0.860603 0.7775401 8.5254e-02 6 0.854859 0.782741 7.2118e-02 9.3266e-04 9.2101e-01 weaklyHypermeth 2.4544e-02 1.0000e+00 weaklyHypermeth 4.8256e-03 0.49354386 weaklyHypermeth 1.8560e-01 1.00000 insignificant 0.07538184 9.8992e-02 insignificant 1.000000 insignificant 0.894195 0.7775401 0.1175311 6 0.8832455 0.782741 0.1005044 2.6725e-04 9.9837e-01 weaklyHypermeth 3.8179e-02 1.0000e+00 weaklyHypermeth 4.7813e-03 9.9757e-01 weaklyHypermeth 0.5787485 1.0000e+00 insignificant 0.09690693 5.5701e-02 insignificant 4.0477e-01 insignificant chr22 37991596 37992596 57130 ENSG00000223020 0.8719326 453 11 0.8487363 314 11 0.820922 233 11 0.8810634 242 11 0.8643753 124 11 0.803909 388 11 0.802275 237 11 0.896290 230 11 0.878694 229 11 0.834524 234 11 0.8754653 331 11 0.8668262 134 11 0.9189996 290 11 0.7160839 47 3 0.8812620 310 11 0.8747475 121 8 0.8101589 376 11 0.8964013 213 11 0.873827 262 11 0.837076 356 11 0.9477273 62 5 0.722319 105 11 0.857222 258 11 0.9201314 111 11 0.8929116 104 11 0.906607 350 11 0.891619 146 11 0.879850 117 10 0.896630 258 11 0.871583 373 11 0.8109720 296 8 0.838126 426 11 0.8007927 303 10 0.823755 225 11 0.825164 244 10 0.8798473 146 8 0.859810 144 11 0.822744 375 11 0.8732151 350 11 0.9031862 411 11 0.8133753 289 11 0.8750059 460 11 0.910001 401 11 0.8402057 0.8085715 0.7851408 0.8431426 0.8376931 0.849407 0.7923209 0.861630 0.8389071 0.8762537 0.8700545 0.839378 0.894809 0.8400115 0.8536057 0.8473051 0.7629173 0.8499435 0.8488723 0.8827968 0.9193408 0.7700942 0.856993 0.8895678 0.8484419 0.887044 0.8535511 0.888547 0.8704761 0.853114 0.8543523 0.857553 0.8374297 0.7771395 0.7246643 0.85194485 0.811850 0.874585 0.8455552 0.8697204 0.8474380 0.8406250 0.8776436 7 0.838212 0.874904 -2.5335e-02 11 0.838801 0.843815 -0.00501448 8.2603e-01 4.0352e-02 weaklyHypometh 1.000000 1.000000 insignificant 0.9745832 2.1511e-02 weaklyHypometh 1 1.000000 insignificant -1.6963e-02 0.40316954 insignificant 1.00000 insignificant 0.838212 0.8420320 -0.0067461 11 0.838801 0.8282765 1.0524e-02 8.3460e-01 1.3221e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.8311e-01 2.6873e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.7326e-02 2.8630e-01 insignificant 1.0000e+00 insignificant 0.838212 0.8984825 -0.0199380 11 0.838801 0.815227 0.02357339 9.4504e-01 3.7264e-02 weaklyHypometh 1.0000e+00 0.6654214 insignificant 7.0359e-01 9.0794e-02 insignificant 1.0000e+00 1.000000 insignificant -0.02227814 2.9857e-01 insignificant 1.0000e+00 insignificant 0.874904 0.8420320 0.01921443 11 0.843815 0.8282765 0.0155388 7.7139e-02 2.9476e-01 insignificant 3.5712e-01 1.0000e+00 insignificant 1.3669e-01 7.3310e-01 insignificant 6.9738e-01 1.0000e+00 insignificant 0.03428939 1.1697e-01 insignificant 7.2653e-01 insignificant 0.874904 0.8984825 5.4698e-03 11 0.843815 0.815227 2.8588e-02 5.1266e-01 1.0670e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.8571e-01 0.54281199 insignificant 1.0000e+00 1.00000 insignificant -0.00531517 8.2915e-01 insignificant 1.000000 insignificant 0.842032 0.8984825 -0.0141799 11 0.8282765 0.815227 0.0130491 5.2953e-01 3.0693e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.3939e-01 7.1103e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.03960456 9.5591e-02 insignificant 5.9373e-01 insignificant chr22 38000596 38001596 57132 ENSG00000223020 0.8392654 267 6 0.7595776 137 6 0.849334 153 6 0.8958787 233 6 0.8968254 73 6 0.798494 273 6 0.783474 139 6 0.927439 113 6 0.838645 106 6 0.791575 79 6 0.8739419 181 6 0.8489319 95 6 0.9317452 137 6 NA 0 0 0.8341992 113 6 0.8240741 48 6 0.7743506 74 6 0.8338457 234 6 0.847001 146 6 0.832405 191 6 0.8444444 47 5 0.854710 110 6 0.912790 189 6 0.8771368 74 4 0.8750000 58 2 0.864889 142 6 0.803942 83 4 0.687831 35 3 0.903229 116 6 0.865446 157 6 0.8829276 174 6 0.838724 318 6 0.8657116 100 6 0.841615 115 6 0.850674 211 6 0.8240741 118 6 0.884094 68 6 0.732966 143 6 0.8744971 224 6 0.9245516 264 6 0.9145562 228 6 0.8732017 249 6 0.882694 272 6 0.8357630 0.7571001 0.8531546 0.9080898 0.9185645 0.817615 0.8271520 0.935842 0.8305023 0.8376794 0.8837611 0.882685 0.946315 NA 0.8677849 0.8317230 0.7939018 0.8346060 0.8772301 0.8434183 0.8685990 0.8529386 0.925559 0.8912424 0.8635266 0.875392 0.8066490 0.757994 0.9289463 0.861110 0.8845399 0.837029 0.8707269 0.8749752 0.8890128 0.84339775 0.899452 0.762902 0.8874560 0.9498487 0.9368532 0.8840776 0.9019794 4 0.852077 0.871590 -1.6350e-02 6 0.842565 0.864111 -0.02154634 9.3297e-01 7.1384e-02 insignificant 1.000000 1.000000 insignificant 0.9471842 9.3713e-02 insignificant 1 1.000000 insignificant -9.8169e-03 0.63438637 insignificant 1.00000 insignificant 0.852077 0.8503311 0.0010816 6 0.842565 0.8282981 1.4267e-02 1.5396e-02 3.2553e-01 weaklyHypermeth 8.2331e-02 1.0000e+00 weaklyHypermeth 6.1200e-02 3.8385e-01 insignificant 3.7455e-01 1.0000e+00 insignificant 7.9162e-03 7.5408e-01 insignificant 1.0000e+00 insignificant 0.852077 0.9046079 -0.0500692 6 0.842565 0.890938 -0.04837271 9.9965e-01 8.8115e-04 weaklyHypometh 1.0000e+00 0.0801044 weaklyHypometh 9.9920e-01 3.3348e-03 weaklyHypometh 1.0000e+00 0.222323 insignificant -0.05279478 4.2558e-03 weaklyHypometh 1.9344e-01 insignificant 0.871590 0.8503311 0.01795102 6 0.864111 0.8282981 0.0358132 1.3613e-02 4.2137e-01 weaklyHypermeth 7.4783e-02 1.0000e+00 weaklyHypermeth 2.1672e-01 6.5524e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01773307 5.3355e-01 insignificant 1.0000e+00 insignificant 0.871590 0.9046079 -3.4282e-02 6 0.864111 0.890938 -2.6826e-02 9.6680e-01 3.3417e-02 weaklyHypometh 1.0000e+00 8.3777e-01 insignificant 9.4625e-01 0.09418897 insignificant 1.0000e+00 1.00000 insignificant -0.04297792 4.9580e-02 weaklyHypometh 0.913686 insignificant 0.850331 0.9046079 -0.0531701 6 0.8282981 0.890938 -0.0626396 9.9336e-01 9.0553e-04 weaklyHypometh 1.0000e+00 8.3845e-03 weaklyHypometh 9.6809e-01 3.0832e-02 weaklyHypometh 1.0000000 2.2962e-01 insignificant -0.06071099 3.9704e-02 weaklyHypometh 3.2019e-01 insignificant chr22 38018396 38019396 57139 ENSG00000223020 0.4048536 173 9 0.3022737 280 10 0.263920 357 11 0.4939699 194 9 0.2010387 329 11 0.640794 255 8 0.357881 272 11 0.246219 332 11 0.263513 243 9 0.276043 205 8 0.4988874 361 11 0.2530833 148 8 0.1159319 329 8 0.2267491 131 5 0.1833520 335 8 0.3404596 198 8 0.1105888 88 3 0.2321154 188 8 0.227077 571 8 0.211018 298 10 0.4487296 190 10 0.283409 191 8 0.445208 156 8 0.3306577 158 7 0.4630877 139 5 0.237194 421 11 0.280213 566 11 0.233101 126 8 0.304209 357 8 0.270822 463 11 0.2262968 489 10 0.367257 357 10 0.0807985 403 11 0.056375 433 10 0.189297 409 6 0.0075758 103 5 0.099309 310 11 0.019205 574 11 0.2058502 348 10 0.2781274 272 9 0.4089334 132 7 0.3544865 198 8 0.338436 121 9 0.3884743 0.2750253 0.2125142 0.3651531 0.2046237 0.498472 0.3409932 0.283847 0.3154623 0.3020876 0.4373618 0.285443 0.151808 0.3055403 0.1870043 0.2190097 0.1633853 0.2310861 0.1838458 0.2511273 0.5017527 0.1625074 0.473537 0.3219896 0.3411536 0.240443 0.2790325 0.241500 0.2956095 0.250407 0.1605952 0.437392 0.0448025 0.0318645 0.1467615 0.02393808 0.071492 0.011315 0.1677187 0.2621696 0.2743975 0.3614658 0.3250032 6 0.287308 0.288957 -1.0493e-02 8 0.293983 0.274451 0.01953142 7.9598e-01 6.2303e-01 insignificant 1.000000 1.000000 insignificant 0.9686556 4.0779e-01 insignificant 1 1.000000 insignificant -3.1694e-02 0.42115680 insignificant 1.00000 insignificant 0.287308 0.0434588 0.2273972 8 0.293983 0.0562261 2.3776e-01 8.3457e-21 1.0000e+00 hypermethylated 2.1962e-19 1.0000e+00 hypermethylated 5.6812e-14 1.0000e+00 hypermethylated 6.3124e-12 1.0000e+00 hypermethylated 2.1706e-01 3.9784e-05 hypermethylated 1.1364e-03 hypermethylated 0.287308 0.2801120 0.0158274 8 0.293983 0.245074 0.04890840 1.6156e-02 1.4683e-01 weaklyHypermeth 3.1008e-01 1.0000000 insignificant 4.5978e-02 1.1752e-01 weaklyHypermeth 8.5144e-01 1.000000 insignificant -0.02467823 5.9994e-01 insignificant 1.0000e+00 insignificant 0.288957 0.0434588 0.23693130 8 0.274451 0.0562261 0.2182252 5.0362e-19 1.0000e+00 hypermethylated 1.5261e-17 1.0000e+00 hypermethylated 7.9289e-13 1.0000e+00 hypermethylated 9.9111e-11 1.0000e+00 hypermethylated 0.24875532 1.3300e-05 hypermethylated 4.5863e-04 hypermethylated 0.288957 0.2801120 2.5433e-02 8 0.274451 0.245074 2.9377e-02 6.0252e-02 4.5809e-01 insignificant 7.7246e-01 1.0000e+00 insignificant 4.4783e-02 0.39789174 weaklyHypermeth 9.7355e-01 1.00000 insignificant 0.00701544 8.7402e-01 insignificant 1.000000 insignificant 0.043459 0.2801120 -0.2107425 9 0.0562261 0.245074 -0.1888483 1.0000e+00 1.6163e-10 hypomethylated 1.0000e+00 4.8980e-09 hypomethylated 1.0000e+00 9.2493e-07 hypomethylated 1.0000000 4.8681e-05 hypomethylated -0.24173988 5.8860e-04 hypomethylated 1.5908e-02 hypomethylated chr22 38147896 38148896 57146 MAP3K7IP1 ENSG00000100324 0.6918144 174 6 0.6328905 83 6 0.575794 46 6 0.7932420 167 6 0.5694444 48 6 0.867460 49 6 0.645588 45 2 0.727615 66 6 0.465909 39 2 0.702062 57 6 0.6587486 147 6 0.8263889 28 2 0.7479708 64 6 0.8000000 37 2 0.6341615 50 6 0.5416667 10 1 0.1000000 6 0 0.7331227 144 6 0.579630 52 6 0.709559 45 6 0.3666667 11 1 0.944444 15 0 0.700818 111 6 0.6726190 27 2 0.7274510 30 2 0.548548 101 6 0.833333 13 1 0.888889 13 1 0.801190 60 2 0.710390 93 6 0.5127714 67 5 0.669360 70 6 0.6994048 87 6 0.469697 32 2 0.709428 84 6 0.6944444 22 1 0.644343 51 2 0.828947 100 6 0.7288165 132 6 0.8273767 166 6 0.7252193 165 6 0.9074697 109 6 0.760711 122 6 0.7531496 0.6712782 0.6346939 0.8339649 0.6428571 0.830612 0.6757983 0.732304 0.4694805 0.7210895 0.6566802 0.725000 0.749119 0.7942857 0.6841171 0.6643598 0.4385791 0.7644155 0.6200000 0.7452941 0.5482684 0.9523810 0.756215 0.6180272 0.7448739 0.605173 0.7339827 0.885714 0.7397959 0.740260 0.6328407 0.724848 0.7137755 0.5363636 0.6893506 0.78095238 0.634372 0.856069 0.7781813 0.8565214 0.7803622 0.8796158 0.8145459 1 0.666912 0.687398 2.1586e-02 6 0.693202 0.661483 0.03171856 2.1144e-01 9.3395e-01 insignificant 1.000000 1.000000 insignificant 0.9345583 2.2921e-01 insignificant 1 1.000000 insignificant -4.7887e-02 0.43266149 lowCoverage 1.00000 lowCoverage 0.666912 0.7340426 -0.0086636 6 0.693202 0.7054122 -1.2211e-02 6.4768e-01 2.9927e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.2139e-01 4.4947e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -2.4224e-02 6.9614e-01 lowCoverage 1.0000e+00 lowCoverage 0.666912 0.7809798 -0.0980588 6 0.693202 0.782065 -0.08886318 9.9967e-01 5.5523e-03 weaklyHypometh 1.0000e+00 0.2776169 insignificant 9.9981e-01 3.8472e-04 weaklyHypometh 1.0000e+00 0.048090 weaklyHypometh -0.13976516 1.5028e-02 lowCoverage 3.8599e-01 lowCoverage 0.687398 0.7340426 -0.02931980 6 0.661483 0.7054122 -0.0439293 8.1423e-01 1.5859e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.9952e-01 8.7690e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02366260 7.3064e-01 lowCoverage 1.0000e+00 lowCoverage 0.687398 0.7809798 -1.1569e-01 6 0.661483 0.782065 -1.2058e-01 9.9999e-01 1.3942e-03 weaklyHypometh 1.0000e+00 1.3942e-01 insignificant 9.9230e-01 0.06359702 insignificant 1.0000e+00 1.00000 insignificant -0.09187850 1.3853e-01 lowCoverage 1.000000 lowCoverage 0.734043 0.7809798 -0.0845481 6 0.7054122 0.782065 -0.0766525 9.4588e-01 1.5536e-02 weaklyHypometh 1.0000e+00 9.8955e-02 weaklyHypometh 9.8924e-01 4.2847e-02 weaklyHypometh 1.0000000 2.8565e-01 insignificant -0.11554110 8.3831e-02 lowCoverage 5.4435e-01 lowCoverage chr22 38191396 38192396 57151 MGAT3 ENSG00000128268 0.9685044 129 4 0.9570881 92 5 0.906818 70 5 0.9158854 126 2 0.9098039 76 4 0.934414 167 4 0.825238 71 5 0.867929 50 4 0.927473 62 5 0.954762 82 5 0.9443353 225 5 0.9357143 48 4 0.9149139 119 5 0.8881119 25 2 0.9274848 68 4 0.6523810 23 3 0.9017857 33 4 0.9495238 177 2 0.880437 135 4 0.897712 141 5 0.9407576 104 5 0.791667 9 0 0.906992 98 5 0.9422222 42 4 0.8666667 30 2 0.950417 117 5 0.864762 60 4 0.683862 31 4 0.941799 117 4 0.968939 113 5 0.9043681 116 5 0.887636 145 5 0.8926740 92 4 0.844364 138 5 1.000000 63 4 NA 0 0 0.875238 91 4 0.805012 119 5 0.9695529 130 3 0.9574967 136 5 0.9152778 93 2 0.8865726 171 4 0.882053 112 2 0.9382271 0.9034871 0.8692463 0.8351925 0.8315711 0.938474 0.8475889 0.890375 0.8889971 0.9739301 0.9310039 0.921790 0.920694 0.8452203 0.8563744 0.8661844 0.8738307 0.8983122 0.9567065 0.9160401 0.9650652 0.7869198 0.915423 0.9417722 0.8519841 0.975712 0.8675105 0.841571 0.8665193 0.913646 0.8975733 0.951302 0.8543145 0.6628144 1.0000000 NA 0.903376 0.847610 0.9344451 0.8935025 0.8720816 0.7965332 0.9014161 1 0.906201 0.914460 -9.3398e-03 5 0.924400 0.758329 0.16607104 7.4864e-01 2.7453e-01 insignificant 1.000000 1.000000 insignificant 0.7615659 4.9962e-01 insignificant 1 1.000000 insignificant 1.5508e-02 0.58355330 lowCoverage 1.00000 lowCoverage 0.906152 0.8508946 0.0560805 5 0.909281 0.8728051 3.6475e-02 1.0916e-01 9.3316e-01 insignificant 4.9844e-01 1.0000e+00 insignificant 6.2864e-01 8.2335e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.9558e-02 6.0790e-01 lowCoverage 1.0000e+00 lowCoverage 0.906152 0.8660436 0.0268059 3 0.909281 0.930076 -0.02079536 2.0304e-01 3.0376e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 6.6626e-01 1.4044e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage -0.01917489 4.3264e-01 lowCoverage 1.0000e+00 lowCoverage 0.916327 0.8508946 0.06566227 5 0.909995 0.8728051 0.0371902 8.5137e-02 8.9622e-01 insignificant 3.8699e-01 1.0000e+00 insignificant 5.3758e-01 7.8823e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00404973 9.2209e-01 lowCoverage 1.0000e+00 lowCoverage 0.916327 0.8660436 3.6966e-02 3 0.909995 0.930076 -2.0081e-02 1.7171e-01 2.3607e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 4.8590e-01 0.17112019 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.03468326 2.5730e-01 lowCoverage 1.000000 lowCoverage 0.850895 0.8660436 -0.0402717 3 0.8728051 0.930076 -0.0572708 9.2053e-01 7.6193e-02 lowCoverage 1.0000e+00 3.6808e-01 lowCoverage 8.3376e-01 1.4170e-01 lowCoverage 1.0000000 7.5374e-01 lowCoverage -0.03873299 3.3793e-01 lowCoverage 1.0000e+00 lowCoverage chr22 38220996 38221996 57154 MGAT3 ENSG00000128268 0.5871058 126 5 0.7073404 90 5 0.440727 75 5 0.5922078 115 5 0.6380952 87 5 0.587541 188 7 0.607752 127 5 0.613739 106 5 0.549289 82 5 0.770040 74 5 0.7025136 158 7 0.7530769 52 5 0.7691729 95 7 0.9375000 10 0 0.8345437 75 5 0.8457143 57 5 0.5595238 44 3 0.5791436 143 6 0.786630 68 5 0.656001 131 5 0.4729592 41 5 0.638690 49 5 0.608848 92 4 0.6842919 57 4 0.8004310 76 3 0.715368 129 5 0.561905 60 5 0.741071 55 5 0.688515 57 5 0.769938 142 7 0.6112584 125 5 0.689085 207 7 0.5874555 91 7 0.749483 80 5 0.544507 140 7 0.8083028 40 3 0.693452 83 5 0.671794 108 7 0.7642730 103 7 0.6590909 147 5 0.7587314 116 5 0.7983215 90 3 0.792538 126 5 0.7866607 0.7074543 0.5722076 0.7911111 0.7750926 0.728551 0.7080771 0.773052 0.6964887 0.8547994 0.7572253 0.725733 0.841124 0.8123880 0.7858038 0.7753333 0.7595918 0.6631387 0.8341026 0.7965865 0.5729960 0.6661574 0.757900 0.8329606 0.7934455 0.789941 0.5997222 0.787318 0.8163233 0.801752 0.7425502 0.800176 0.7114093 0.8101203 0.6388823 0.88547009 0.800185 0.648007 0.8293682 0.7621970 0.6568032 0.8701660 0.8375228 3 0.751844 0.757798 -9.9280e-03 5 0.672511 0.669320 0.00319142 7.3424e-01 4.5701e-01 insignificant 1.000000 1.000000 insignificant 0.7655255 4.5280e-01 insignificant 1 1.000000 insignificant 1.0686e-02 0.78202123 insignificant 1.00000 insignificant 0.751844 0.7084871 0.0380773 5 0.672511 0.6432303 2.9281e-02 5.9058e-02 9.0601e-01 insignificant 2.8393e-01 1.0000e+00 insignificant 2.7384e-01 2.3262e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.0294e-05 9.9920e-01 insignificant 1.0000e+00 insignificant 0.751445 0.7835052 -0.0280265 5 0.663447 0.739333 -0.07588623 8.5206e-01 1.2542e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.9604e-01 3.5867e-02 weaklyHypometh 1.0000e+00 0.757100 insignificant -0.07870807 5.1740e-02 insignificant 7.4985e-01 insignificant 0.757798 0.7084871 0.04261245 5 0.669320 0.6432303 0.0260893 2.5506e-01 9.3851e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.5729e-01 3.5126e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01063569 8.2989e-01 insignificant 1.0000e+00 insignificant 0.757798 0.7831325 -1.4016e-02 5 0.669320 0.702095 -3.2776e-02 8.1781e-01 2.4072e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7398e-01 0.06787371 insignificant 1.0000e+00 1.00000 insignificant -0.08939405 3.0342e-02 weaklyHypometh 0.722437 insignificant 0.708487 0.7831325 -0.0648493 5 0.6432303 0.702095 -0.0588650 9.5226e-01 3.5435e-02 weaklyHypometh 1.0000e+00 1.9796e-01 insignificant 8.2075e-01 1.2714e-01 insignificant 1.0000000 6.7988e-01 insignificant -0.07875836 1.3419e-01 insignificant 7.1442e-01 insignificant chr22 38592796 38593796 57179 ENSG00000203593 0.8020957 229 8 0.7182098 176 9 0.721876 126 9 0.7722678 202 8 0.7430556 40 6 0.788785 223 8 0.772109 54 6 0.823568 100 6 0.631699 56 6 0.721726 51 5 0.8350692 200 6 0.5714286 15 0 0.6833595 68 6 0.7777778 34 2 0.8068182 79 6 0.7857143 16 0 0.8333333 6 0 0.8357565 189 9 0.704221 108 6 0.706310 173 8 0.9166667 33 2 0.591991 40 4 0.704317 150 9 0.7183673 49 6 0.8047619 32 6 0.839251 226 9 0.803704 73 6 0.756944 22 2 0.695980 89 6 0.815436 240 9 0.7660982 202 9 0.766611 296 8 0.6786626 194 9 0.686966 61 6 0.726297 122 9 1.0000000 12 0 0.516850 49 6 0.735663 234 9 0.7786341 209 8 0.8454118 219 8 0.8065447 212 9 0.8360467 147 8 0.799988 178 8 0.7887719 0.6692952 0.7032967 0.7742010 0.7571225 0.779613 0.7030932 0.789773 0.6274510 0.7342796 0.8281865 0.638177 0.655800 0.7901235 0.7500000 0.6965812 0.6998895 0.7985335 0.7940300 0.7637322 0.8824786 0.7142580 0.765679 0.8070818 0.7846154 0.851620 0.8009497 0.758547 0.8145188 0.813524 0.8093515 0.761125 0.7157133 0.6559281 0.7448164 0.84102824 0.621893 0.699495 0.7820046 0.8460884 0.8342535 0.8001003 0.8206923 2 0.767832 0.791034 -2.7630e-02 8 0.768824 0.748050 0.02077440 7.9021e-01 1.2827e-01 insignificant 1.000000 1.000000 insignificant 0.8828599 8.6077e-02 insignificant 1 1.000000 insignificant -1.3252e-02 0.64733593 insignificant 1.00000 insignificant 0.767832 0.7291667 0.0364608 8 0.768824 0.6816422 8.7182e-02 1.7170e-02 8.9829e-01 weaklyHypermeth 9.0845e-02 1.0000e+00 weaklyHypermeth 1.0219e-01 9.2143e-01 insignificant 5.7090e-01 1.0000e+00 insignificant 2.7686e-02 6.8978e-01 insignificant 1.0000e+00 insignificant 0.767832 0.8000000 -0.0463629 8 0.768824 0.829895 -0.06107056 9.2470e-01 1.0539e-02 weaklyHypometh 1.0000e+00 0.3193584 insignificant 9.3227e-01 9.4639e-03 weaklyHypometh 1.0000e+00 0.391117 insignificant -0.06156604 6.3233e-03 weaklyHypometh 2.2582e-01 insignificant 0.791034 0.7291667 0.05655981 9 0.748050 0.6816422 0.0664076 1.1135e-03 9.6873e-01 weaklyHypermeth 7.5748e-03 1.0000e+00 weaklyHypermeth 9.6137e-03 9.7876e-01 weaklyHypermeth 7.6906e-02 1.0000e+00 weaklyHypermeth 0.04093771 5.6904e-01 insignificant 1.0000e+00 insignificant 0.791034 0.8000000 -1.6362e-02 8 0.748050 0.829895 -8.1845e-02 8.6517e-01 2.3313e-02 weaklyHypometh 1.0000e+00 7.7711e-01 insignificant 8.7337e-01 0.13859089 insignificant 1.0000e+00 1.00000 insignificant -0.04831431 9.1243e-02 insignificant 1.000000 insignificant 0.729167 0.8000000 -0.0718397 8 0.6816422 0.829895 -0.1482526 8.8297e-01 5.1032e-05 weaklyHypometh 1.0000e+00 6.7148e-04 weaklyHypometh 9.4926e-01 1.7973e-03 weaklyHypometh 1.0000000 2.6048e-02 weaklyHypometh -0.08925202 2.2495e-01 insignificant 1.0000e+00 insignificant chr22 38715796 38716796 57192 GRAP2 ENSG00000100351 0.8217143 171 5 0.6233563 294 5 0.792735 125 3 0.8085937 118 3 0.6976621 89 3 0.704915 439 5 0.623497 145 5 0.723986 160 5 0.445355 98 3 0.600000 84 2 0.7851787 303 5 0.6921569 70 2 0.7941901 141 5 0.7698462 69 3 0.7318841 146 3 0.5952381 60 2 1.0000000 1 0 0.7730486 189 5 0.775514 254 5 0.771897 286 5 0.7413752 81 5 0.785714 30 4 0.785577 129 5 0.8489011 48 3 0.8200000 17 2 0.827267 406 5 0.724142 186 3 0.672222 21 2 0.739467 226 5 0.839954 401 5 0.8419150 479 5 0.753526 312 5 0.7395926 240 5 0.505841 199 5 0.738840 274 5 NA 0 0 0.646221 108 5 0.657234 383 5 0.6467728 285 5 0.8303466 299 5 0.7031620 178 5 0.8539007 196 3 0.796735 189 5 0.6119314 0.5273043 0.5966325 0.5983264 0.3951916 0.602228 0.7059966 0.635200 0.5896038 0.5334000 0.6633944 0.586682 0.619098 0.5435569 0.6441739 0.4900000 0.7023148 0.6297426 0.6659774 0.6257638 0.6136894 0.7737143 0.648257 0.5150769 0.6128000 0.730755 0.6121765 0.570133 0.6075737 0.755937 0.7776674 0.673384 0.7743781 0.5286421 0.6078754 NA 0.686118 0.341030 0.6782458 0.7093070 0.6433511 0.6963972 0.6645509 2 0.643629 0.736707 -8.6581e-02 5 0.725635 0.798356 -0.07272118 9.9997e-01 4.0513e-05 weaklyHypometh 1.000000 0.020256 weaklyHypometh 0.9618542 8.3849e-02 insignificant 1 1.000000 insignificant -5.5133e-02 0.07840799 lowCoverage 1.00000 lowCoverage 0.643629 0.6054817 0.0575578 5 0.725635 0.6732811 5.2354e-02 7.0742e-02 9.6625e-01 insignificant 3.3686e-01 1.0000e+00 insignificant 1.4922e-01 8.7303e-01 insignificant 7.7719e-01 1.0000e+00 insignificant 6.8993e-02 2.0711e-01 lowCoverage 1.0000e+00 lowCoverage 0.643629 0.7271142 -0.0917602 5 0.725635 0.788055 -0.06242029 9.3375e-01 3.0725e-04 weaklyHypometh 1.0000e+00 0.0366982 weaklyHypometh 7.8151e-01 1.8704e-02 weaklyHypometh 1.0000e+00 0.534406 insignificant -0.03964499 4.2323e-01 lowCoverage 1.0000e+00 lowCoverage 0.736707 0.6054817 0.14133111 5 0.798356 0.6732811 0.1250750 2.2221e-03 9.9992e-01 weaklyHypermeth 1.4154e-02 1.0000e+00 weaklyHypermeth 9.2688e-02 9.8084e-01 insignificant 5.0927e-01 1.0000e+00 insignificant 0.12412629 4.0276e-02 lowCoverage 3.4502e-01 lowCoverage 0.736707 0.7271142 -4.3274e-04 5 0.798356 0.788055 1.0301e-02 9.6388e-02 2.2618e-02 weaklyHypometh 1.0000e+00 7.7711e-01 insignificant 4.3931e-01 0.16688931 insignificant 1.0000e+00 1.00000 insignificant 0.01548846 7.2968e-01 lowCoverage 1.000000 lowCoverage 0.605482 0.7271142 -0.1462520 5 0.6732811 0.788055 -0.1147741 9.7744e-01 4.8923e-02 weaklyHypometh 1.0000e+00 2.5885e-01 insignificant 9.6889e-01 2.5928e-02 weaklyHypometh 1.0000000 1.9792e-01 insignificant -0.10863783 9.8564e-02 lowCoverage 6.0469e-01 lowCoverage chr22 39058296 39059296 57222 TNRC6B ENSG00000100354 0.8108217 329 10 0.6909294 232 11 0.813901 224 10 0.8365320 215 11 0.7862489 86 10 0.731681 354 10 0.763870 155 9 0.800271 281 10 0.735289 173 10 0.738435 169 9 0.8145957 355 11 0.6400794 75 9 0.7889826 197 10 0.7059524 24 4 0.8167914 252 10 0.7833333 58 7 0.8329726 58 7 0.8436041 212 10 0.799933 231 10 0.874662 266 10 0.7038567 85 9 0.777778 42 5 0.775657 233 11 0.8182276 114 11 0.8345647 118 8 0.838360 313 11 0.761105 95 9 0.793409 58 6 0.802339 222 10 0.848349 394 11 0.8001171 289 10 0.768547 505 11 0.7231488 269 11 0.731879 226 9 0.832571 254 11 0.7760317 83 7 0.725750 66 6 0.821328 293 11 0.8326467 230 11 0.8738549 375 11 0.8528334 210 10 0.7981162 278 7 0.852385 249 11 0.8646973 0.7394674 0.8511197 0.8523708 0.8396372 0.723319 0.8006886 0.809268 0.7401762 0.7571214 0.8356531 0.738270 0.833213 0.8149320 0.8582502 0.9218559 0.8097402 0.8710454 0.8447082 0.8790645 0.8484182 0.8324605 0.844740 0.8703376 0.8869648 0.892434 0.8135410 0.837504 0.8352883 0.869406 0.8176634 0.795683 0.8142013 0.7607932 0.8725276 0.79716844 0.793552 0.840320 0.8477797 0.8886525 0.8774870 0.8604299 0.8955696 7 0.798023 0.835494 -2.3536e-02 11 0.788313 0.807721 -0.01940724 9.7516e-01 1.7263e-02 weaklyHypometh 1.000000 0.690503 insignificant 0.8785984 2.2429e-02 weaklyHypometh 1 1.000000 insignificant -1.3082e-02 0.45789123 insignificant 1.00000 insignificant 0.798023 0.8060453 -0.0016352 11 0.788313 0.7871663 1.1472e-03 4.5346e-01 3.6055e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.4494e-01 3.4921e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.1993e-02 6.2801e-01 insignificant 1.0000e+00 insignificant 0.798023 0.8912072 -0.0602249 10 0.788313 0.851463 -0.06314990 9.9775e-01 2.6153e-05 weaklyHypometh 1.0000e+00 0.0065382 weaklyHypometh 9.8059e-01 6.7160e-04 weaklyHypometh 1.0000e+00 0.074622 weaklyHypometh -0.06152293 4.6718e-03 weaklyHypometh 2.0312e-01 insignificant 0.835494 0.8060453 0.02098787 11 0.807721 0.7871663 0.0205544 9.8383e-02 8.1874e-01 insignificant 4.4141e-01 1.0000e+00 insignificant 3.3051e-01 8.3868e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.02507446 3.1052e-01 insignificant 1.0000e+00 insignificant 0.835494 0.8912072 -3.5611e-02 10 0.807721 0.851463 -4.3743e-02 9.9968e-01 2.7442e-03 weaklyHypometh 1.0000e+00 1.9890e-01 insignificant 9.9776e-01 0.05171628 insignificant 1.0000e+00 1.00000 insignificant -0.04844141 1.7369e-02 weaklyHypometh 0.526327 insignificant 0.806045 0.8912072 -0.0580921 10 0.7871663 0.851463 -0.0642971 9.9715e-01 1.5573e-03 weaklyHypometh 1.0000e+00 1.3086e-02 weaklyHypometh 9.8616e-01 8.8378e-03 weaklyHypometh 1.0000000 9.0182e-02 weaklyHypometh -0.07351586 1.4669e-02 weaklyHypometh 1.7057e-01 insignificant chr22 39111296 39112296 57223 SGSM3 ENSG00000100359 0.8058893 401 8 0.7067596 196 8 0.693639 205 8 0.7687973 230 8 0.6683053 158 8 0.763775 321 8 0.736742 223 8 0.670457 135 8 0.709512 191 8 0.720743 184 8 0.7246029 311 8 0.6959676 159 8 0.7651515 220 8 NA 0 0 0.7335068 238 8 0.6071816 201 8 0.7841270 95 5 0.7973098 199 8 0.777429 197 8 0.838491 357 8 0.8149488 78 5 0.848942 121 8 0.810394 258 8 0.7913324 123 5 0.9347405 80 8 0.780770 243 8 0.901389 94 8 0.922403 65 5 0.783218 134 7 0.806264 259 8 0.7629145 201 8 0.811211 472 8 0.7635552 140 8 0.744112 155 8 0.421791 72 5 0.7674643 113 8 0.786572 118 8 0.710893 242 8 0.8341556 317 8 0.8146157 359 8 0.8390480 260 8 0.8171529 301 8 0.847948 322 8 0.8865355 0.8136845 0.8243074 0.8792046 0.7402089 0.904014 0.8298879 0.831521 0.8205688 0.8137591 0.7976847 0.745701 0.886992 NA 0.8431248 0.6731906 0.8229501 0.8938780 0.8393751 0.9220470 0.8738659 0.9146594 0.887267 0.8779757 0.9430171 0.882954 0.9570935 0.913053 0.8177027 0.890804 0.8919380 0.909332 0.8728751 0.8596026 0.4912716 0.87939656 0.871887 0.818503 0.9175863 0.9064687 0.9307649 0.9007575 0.9149162 5 0.796257 0.859492 -5.8280e-02 8 0.733828 0.803226 -0.06939774 9.9888e-01 1.7616e-04 weaklyHypometh 1.000000 0.058720 weaklyHypometh 0.9921790 4.5062e-05 weaklyHypometh 1 0.045062 weaklyHypometh -9.5532e-02 0.00015502 weaklyHypometh 0.15502 insignificant 0.796257 0.7892857 -0.0036551 8 0.733828 0.7357930 -1.9648e-03 5.7798e-02 2.5322e-01 insignificant 2.7922e-01 1.0000e+00 insignificant 1.4853e-01 1.3209e-01 insignificant 7.7719e-01 1.0000e+00 insignificant 3.6114e-02 5.5753e-01 insignificant 1.0000e+00 insignificant 0.796257 0.8678640 -0.0747021 8 0.733828 0.834867 -0.10103831 1.0000e+00 1.3001e-05 weaklyHypometh 1.0000e+00 0.0043337 weaklyHypometh 1.0000e+00 1.2661e-05 weaklyHypometh 1.0000e+00 0.011303 weaklyHypometh -0.09540578 1.1454e-06 weaklyHypometh 5.7269e-04 weaklyHypometh 0.859492 0.7892857 0.05731774 8 0.803226 0.7357930 0.0674329 2.1403e-03 9.7331e-01 weaklyHypermeth 1.3720e-02 1.0000e+00 weaklyHypermeth 5.0390e-03 9.8426e-01 weaklyHypermeth 4.3439e-02 1.0000e+00 weaklyHypermeth 0.13164605 6.7444e-02 insignificant 4.8872e-01 insignificant 0.859492 0.8678640 -2.5131e-02 8 0.803226 0.834867 -3.1641e-02 9.8719e-01 6.2918e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 8.2428e-01 0.26851123 insignificant 1.0000e+00 1.00000 insignificant 0.00012663 9.9447e-01 insignificant 1.000000 insignificant 0.789286 0.8678640 -0.0847447 8 0.7357930 0.834867 -0.0990735 9.9625e-01 1.1591e-03 weaklyHypometh 1.0000e+00 1.0349e-02 weaklyHypometh 9.5861e-01 1.1735e-02 weaklyHypometh 1.0000000 1.1284e-01 insignificant -0.13151942 6.7122e-02 insignificant 4.5661e-01 insignificant chr22 39320996 39321996 57239 ENSG00000217458 0.7142857 36 3 0.6376572 99 6 0.619444 37 2 0.6304113 48 5 0.4946078 56 5 0.405473 65 5 0.705699 61 6 0.671958 56 6 0.819444 32 4 0.590909 35 2 0.4772145 119 6 0.7444444 18 2 0.6178571 88 6 0.6517677 76 6 0.6035354 68 6 0.8750000 20 1 0.2095238 51 2 0.6500000 21 2 0.600694 57 3 0.576768 58 5 0.5361111 26 4 0.800000 7 0 0.601389 47 6 0.4666667 22 3 0.7000000 38 5 0.781448 87 5 0.574074 55 5 0.583333 18 2 0.640783 40 5 0.779449 111 6 0.5845861 66 5 0.576389 46 5 0.4835807 68 6 0.518615 61 5 0.608822 81 5 0.8472222 14 0 0.647619 54 5 0.641071 80 6 0.5238095 39 5 0.5468410 64 4 0.5928932 49 5 0.3958333 30 2 0.773016 62 5 0.7103271 0.4735147 0.5164251 0.4695872 0.4635124 0.328120 0.5041347 0.591672 0.7753623 0.4881423 0.4545978 0.481159 0.491097 0.5916996 0.5812473 0.7789855 0.4167819 0.4666667 0.4855072 0.4419192 0.3961353 0.7650966 0.433575 0.4269324 0.6637681 0.702208 0.4963768 0.468599 0.5682916 0.689361 0.5097944 0.370773 0.5614342 0.4040749 0.4693113 0.75120773 0.675362 0.559627 0.3291925 0.4015345 0.4722065 0.2989130 0.7752933 1 0.554128 0.613879 -3.0244e-02 5 0.640301 0.719229 -0.07892719 8.9707e-01 2.7838e-01 insignificant 1.000000 1.000000 insignificant 0.9372002 5.7970e-01 insignificant 1 1.000000 insignificant -2.0518e-02 0.64900602 lowCoverage 1.00000 lowCoverage 0.555251 0.5754190 -0.0257925 6 0.629885 0.5645703 6.5314e-02 4.3545e-01 5.6303e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.3458e-01 6.9405e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -9.6536e-03 8.7837e-01 lowCoverage 1.0000e+00 lowCoverage 0.553506 0.5819672 0.0276797 5 0.603735 0.569526 0.03420938 3.6428e-01 8.8337e-01 insignificant 1.0000e+00 1.0000000 insignificant 1.5864e-01 9.4702e-01 insignificant 1.0000e+00 1.000000 insignificant 0.04835614 5.0851e-01 lowCoverage 1.0000e+00 lowCoverage 0.611807 0.5779037 0.00636527 5 0.625638 0.6138715 0.0117667 4.0467e-01 6.9076e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.3873e-01 5.5283e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01086410 8.6190e-01 lowCoverage 1.0000e+00 lowCoverage 0.611807 0.5819672 5.1953e-02 5 0.625638 0.569526 5.6112e-02 1.3352e-01 8.9163e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.0105e-01 0.95672952 insignificant 1.0000e+00 1.00000 insignificant 0.06887383 3.5220e-01 lowCoverage 1.000000 lowCoverage 0.577904 0.5819672 0.0459740 5 0.6138715 0.569526 0.0443456 3.1001e-01 8.1924e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.7369e-02 8.2614e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.05800973 4.9002e-01 lowCoverage 1.0000e+00 lowCoverage chr22 39409096 39410096 57250 MCHR1 ENSG00000128285 0.7067348 244 9 0.6156957 165 9 0.608647 124 9 0.7380438 194 9 0.6137626 85 9 0.760015 360 9 0.532182 119 9 0.674201 165 9 0.635460 116 9 0.634241 135 10 0.7112885 242 9 0.6205087 68 6 0.6875051 135 9 0.8409524 38 5 0.6836264 143 9 0.5275000 44 6 0.7470211 88 5 0.7410924 147 9 0.685193 192 9 0.671568 285 9 0.6476879 63 8 0.561233 79 6 0.693525 200 9 0.6948737 83 8 0.6995591 64 6 0.752558 201 9 0.757077 62 7 0.570238 34 3 0.615906 127 9 0.779485 233 9 0.6480444 239 9 0.649337 443 9 0.7121147 144 9 0.593322 144 9 0.703861 200 9 0.7122665 84 5 0.666136 114 9 0.677206 253 9 0.7742898 253 9 0.7634691 245 9 0.7866191 226 9 0.7436275 177 9 0.740366 283 9 0.7610006 0.6693385 0.6647413 0.7878620 0.6501200 0.767345 0.6003973 0.720626 0.6781229 0.7613389 0.7699862 0.748866 0.743555 0.7793832 0.7418836 0.5671736 0.7719993 0.7592932 0.7770093 0.7872266 0.7693139 0.6948927 0.743999 0.7314120 0.7805993 0.768909 0.8038063 0.725373 0.7209222 0.810154 0.7136366 0.765176 0.7522386 0.6131353 0.7778285 0.79565550 0.669822 0.733178 0.8171509 0.8013971 0.8352484 0.7899001 0.8176834 5 0.719003 0.730853 -1.2620e-02 9 0.649396 0.668031 -0.01863522 6.8386e-01 8.4354e-02 insignificant 1.000000 1.000000 insignificant 0.7742173 1.0042e-01 insignificant 1 1.000000 insignificant -6.9844e-04 0.97921260 insignificant 1.00000 insignificant 0.719378 0.6869010 0.0286845 9 0.681002 0.6997560 -1.8754e-02 4.8275e-02 5.0119e-01 weaklyHypermeth 2.4017e-01 1.0000e+00 insignificant 1.4591e-01 4.0081e-01 insignificant 7.6814e-01 1.0000e+00 insignificant -5.7225e-03 8.2361e-01 insignificant 1.0000e+00 insignificant 0.720392 0.7854730 -0.0638128 9 0.693177 0.758521 -0.06534418 9.9989e-01 3.8110e-04 weaklyHypometh 1.0000e+00 0.0381103 weaklyHypometh 1.0000e+00 2.3866e-05 weaklyHypometh 1.0000e+00 0.011303 weaklyHypometh -0.08991237 1.0678e-04 weaklyHypometh 1.0678e-02 weaklyHypometh 0.731106 0.6869010 0.04248001 9 0.684834 0.6997560 -0.0149220 2.9540e-02 8.7149e-01 weaklyHypermeth 1.4859e-01 1.0000e+00 insignificant 1.3260e-01 9.5886e-01 insignificant 6.8350e-01 1.0000e+00 insignificant -0.00502402 8.5758e-01 insignificant 1.0000e+00 insignificant 0.732782 0.7854730 -4.9119e-02 9 0.710422 0.758521 -4.8099e-02 9.9572e-01 1.6205e-03 weaklyHypometh 1.0000e+00 1.4732e-01 insignificant 9.9403e-01 0.00215908 weaklyHypometh 1.0000e+00 0.30844 insignificant -0.08921393 1.2219e-03 weaklyHypometh 0.135770 insignificant 0.686233 0.7854730 -0.0923108 9 0.6663956 0.758521 -0.0921253 9.9994e-01 8.1778e-04 weaklyHypometh 1.0000e+00 7.7884e-03 weaklyHypometh 9.9135e-01 2.7636e-03 weaklyHypometh 1.0000000 3.5245e-02 weaklyHypometh -0.08418991 4.4820e-03 weaklyHypometh 6.5304e-02 weaklyHypometh chr22 39446596 39447596 57252 MCHR1 ENSG00000128285 0.4367216 104 2 0.4593021 128 4 0.320175 95 5 0.6874183 125 4 0.2873196 76 5 0.490196 200 6 0.374907 80 5 0.453948 131 6 0.288667 126 4 0.739146 91 3 0.5829012 186 6 0.2038095 54 3 0.3454617 113 6 0.2690568 66 4 0.3016393 91 5 0.7444444 40 1 0.2484848 32 3 0.1494253 92 1 0.425325 67 3 0.481375 133 6 0.7583333 24 1 0.458025 47 4 0.434028 66 3 0.3752381 45 3 0.7312985 92 4 0.437060 150 6 0.503818 68 5 0.262609 35 3 0.595190 93 5 0.589177 185 6 0.5129922 165 6 0.527574 147 6 0.0487434 202 5 0.054762 65 4 0.151580 175 4 0.0000000 51 4 0.135183 124 6 0.008772 149 6 0.2092593 108 3 0.3512800 224 4 0.3736111 84 4 0.1838384 61 1 0.533581 149 4 0.5785676 0.5763299 0.6192344 0.7057788 0.4876097 0.739328 0.6379656 0.598838 0.5988185 0.7755504 0.7727818 0.526157 0.310405 0.5917267 0.4409143 0.8389671 0.5193949 0.3525437 0.4405067 0.5977487 0.9788732 0.3059468 0.718750 0.5919517 0.5492196 0.565018 0.6677100 0.755971 0.5179501 0.640612 0.5383062 0.694126 0.0175469 0.0669014 0.0924296 0.00028169 0.228494 0.041142 0.1399061 0.2319873 0.2795775 0.2057618 0.3933178 1 0.558128 0.599821 -3.5245e-02 6 0.475760 0.534038 -0.05827845 9.6816e-01 9.5102e-02 insignificant 1.000000 1.000000 insignificant 0.9171739 1.2644e-01 insignificant 1 1.000000 insignificant -1.0096e-01 0.08125816 lowCoverage 1.00000 lowCoverage 0.558128 0.0835509 0.4951656 4 0.475760 0.0683954 4.0736e-01 1.5237e-18 1.0000e+00 lowCoverage 3.6278e-17 1.0000e+00 lowCoverage 9.1823e-10 1.0000e+00 lowCoverage 3.1663e-08 1.0000e+00 lowCoverage 3.4798e-01 1.3784e-07 lowCoverage 6.5637e-06 lowCoverage 0.558128 0.3322684 0.3030509 4 0.475760 0.306756 0.16900415 6.9261e-06 9.9437e-01 lowCoverage 3.6453e-04 1.0000000 lowCoverage 1.7988e-04 9.7356e-01 lowCoverage 1.2848e-02 1.000000 lowCoverage 0.08417226 2.9031e-01 lowCoverage 1.0000e+00 lowCoverage 0.599821 0.0835509 0.53499654 4 0.534038 0.0683954 0.4656429 1.8404e-19 1.0000e+00 lowCoverage 5.9368e-18 1.0000e+00 lowCoverage 1.9493e-09 1.0000e+00 lowCoverage 7.7972e-08 1.0000e+00 lowCoverage 0.44893842 7.3611e-08 lowCoverage 5.2610e-06 lowCoverage 0.599821 0.3322684 2.9671e-01 4 0.534038 0.306756 2.2728e-01 8.3124e-06 9.9999e-01 lowCoverage 4.6180e-04 1.0000e+00 lowCoverage 2.1282e-04 0.99999603 lowCoverage 1.6371e-02 1.00000 lowCoverage 0.18513125 4.0756e-02 lowCoverage 0.831751 lowCoverage 0.083551 0.3322684 -0.2835704 4 0.0683954 0.306756 -0.2383603 9.9516e-01 4.7006e-09 lowCoverage 1.0000e+00 1.0932e-07 lowCoverage 9.9800e-01 2.0703e-03 lowCoverage 1.0000000 2.8360e-02 lowCoverage -0.26380717 1.0412e-02 lowCoverage 1.2673e-01 lowCoverage chr22 39654196 39655196 57258 ENSG00000200683 0.8709091 81 5 0.9633333 46 3 0.775362 71 3 0.8772727 58 5 1.0000000 31 3 0.865329 192 5 0.980000 34 3 0.736000 66 5 0.769318 42 3 0.800000 31 3 0.8754658 89 5 0.8602339 30 3 0.8214286 51 3 1.0000000 17 1 1.0000000 32 3 0.8333333 22 3 0.9666667 29 3 0.8888889 49 5 0.916471 39 3 0.897265 163 5 0.9761905 33 2 0.843333 29 2 0.788485 67 5 0.9866667 34 3 0.8000000 13 0 0.833333 68 5 0.816667 32 3 0.919048 34 3 0.875000 35 3 0.828173 74 5 0.8007143 59 5 0.847525 157 5 0.8750000 65 3 0.868889 34 3 0.791667 61 3 0.9666667 18 2 0.690909 51 3 0.848485 37 3 0.8000000 43 3 0.9413043 69 5 0.8857143 38 5 0.8238889 56 5 0.864444 53 5 1.0000000 0.9356322 0.7810053 0.9267241 1.0000000 0.949097 0.9586207 0.950345 0.9469697 1.0000000 0.9592347 0.870942 0.957307 0.9618186 1.0000000 0.6954023 0.9712644 1.0000000 0.8628127 0.9641611 0.9794745 0.9003831 0.972832 0.9724138 1.0000000 0.903257 0.8467433 0.970443 0.9626437 0.951885 0.9396278 0.940603 0.8893678 0.8793103 0.9875479 0.95210728 0.981191 0.962382 1.0000000 0.9875062 1.0000000 0.9012771 0.9404853 2 0.894288 0.885039 9.5691e-03 5 0.857812 0.840032 0.01778008 1.2417e-01 7.5304e-01 insignificant 1.000000 1.000000 insignificant 0.2444692 6.5252e-01 insignificant 1 1.000000 insignificant 2.5269e-02 0.34992021 lowCoverage 1.00000 lowCoverage 0.894288 0.9210526 -0.0028396 3 0.857812 0.8496579 8.1539e-03 5.6728e-01 7.2949e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 6.4226e-01 6.9182e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 4.4595e-02 3.2025e-01 lowCoverage 1.0000e+00 lowCoverage 0.894288 0.9073359 -0.0259014 5 0.857812 0.878216 -0.02040472 2.4412e-01 8.5660e-02 insignificant 1.0000e+00 0.9311902 insignificant 1.1599e-01 2.6708e-01 insignificant 1.0000e+00 1.000000 insignificant 0.02179350 4.9476e-01 lowCoverage 1.0000e+00 lowCoverage 0.885039 0.9210526 -0.00691592 3 0.840032 0.8496579 -0.0096262 8.3133e-01 5.4025e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 5.9106e-01 5.6234e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.01932523 6.6124e-01 lowCoverage 1.0000e+00 lowCoverage 0.885039 0.9073359 -3.5943e-02 5 0.840032 0.878216 -3.8185e-02 9.4265e-01 6.6364e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 7.1259e-01 0.30963145 insignificant 1.0000e+00 1.00000 insignificant -0.00347580 9.1409e-01 lowCoverage 1.000000 lowCoverage 0.921053 0.9073359 -0.0272220 3 0.8496579 0.878216 -0.0285586 8.2716e-01 3.3914e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.2157e-01 4.5076e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage -0.02280103 6.2617e-01 lowCoverage 1.0000e+00 lowCoverage chr22 39722696 39723696 57261 RBX1 ENSG00000100387 0.6466667 45 5 0.6625397 57 4 0.655758 42 5 0.5193407 64 5 0.5709091 38 5 0.829365 60 4 0.524675 35 4 0.757778 62 5 0.600000 10 0 0.800000 15 0 0.6831734 111 5 0.4000000 9 0 0.7440559 49 4 0.6714286 25 2 0.7300000 27 4 0.7733333 24 4 0.4285714 7 1 0.4850420 38 4 0.742857 36 5 0.623333 30 4 0.5333333 7 0 0.533333 12 0 0.837500 33 2 0.6766667 32 4 0.5723810 37 3 0.692206 66 5 0.933333 18 2 0.500000 4 0 0.691282 63 5 0.676696 71 4 0.7167033 54 5 0.666667 38 5 0.5908995 79 5 0.433333 20 1 0.593485 89 4 0.5000000 14 0 0.633586 51 4 0.603571 39 5 0.6333333 32 1 0.6838095 70 5 0.6658242 75 5 0.7866667 25 2 0.582418 60 5 0.7209302 0.7080842 0.7156448 0.6132890 0.6448203 0.876523 0.6094835 0.820672 0.7209302 0.8604651 0.7460571 0.581395 0.812978 0.7408638 0.7593023 0.8418605 NA 0.5850954 0.8073090 0.7197674 0.6046512 0.6744186 0.873547 0.7325581 0.5960133 0.768844 0.9379845 NA 0.7685152 0.757915 0.7634424 0.751938 0.6532081 0.5116279 0.6559197 0.51550388 0.610292 0.674003 0.6821705 0.7251384 0.7497444 0.8372093 0.6644518 0 0.705357 0.731034 -4.5768e-03 4 0.670136 0.677856 -0.00771968 7.0537e-01 5.9835e-01 lowCoverage 1.000000 1.000000 lowCoverage 0.6498378 3.7286e-01 lowCoverage 1 1.000000 lowCoverage -2.6734e-02 0.56460554 lowCoverage 1.00000 lowCoverage 0.705357 0.6198630 0.0993602 4 0.670136 0.5656597 1.0448e-01 6.7321e-04 9.9473e-01 lowCoverage 4.4290e-03 1.0000e+00 lowCoverage 9.5744e-04 9.9239e-01 lowCoverage 1.0185e-02 1.0000e+00 lowCoverage 8.3296e-02 6.4986e-02 lowCoverage 4.7435e-01 lowCoverage 0.705357 0.7175573 0.0051585 5 0.670136 0.669844 0.00029189 3.4050e-01 4.1014e-01 insignificant 1.0000e+00 1.0000000 insignificant 3.2953e-01 1.9331e-01 insignificant 1.0000e+00 1.000000 insignificant -0.02796890 5.3505e-01 lowCoverage 1.0000e+00 lowCoverage 0.731034 0.6198630 0.10301245 4 0.677856 0.5656597 0.1121964 1.6140e-03 9.9346e-01 lowCoverage 1.0689e-02 1.0000e+00 lowCoverage 1.9841e-03 9.9385e-01 lowCoverage 2.0246e-02 1.0000e+00 lowCoverage 0.11002928 3.6580e-02 lowCoverage 3.1808e-01 lowCoverage 0.731034 0.7175573 8.5278e-03 4 0.677856 0.669844 8.0116e-03 5.7103e-01 4.7833e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.0332e-01 0.48698659 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.00123514 9.8059e-01 lowCoverage 1.000000 lowCoverage 0.619863 0.7175573 -0.0890660 4 0.5656597 0.669844 -0.1041848 6.3346e-01 6.8963e-04 lowCoverage 1.0000e+00 6.6954e-03 lowCoverage 9.3444e-01 2.0319e-03 lowCoverage 1.0000000 2.8220e-02 lowCoverage -0.11126442 3.9421e-02 lowCoverage 3.2019e-01 lowCoverage chr22 39824096 39825096 57264 MIR1281 ENSG00000100393 0.7632362 166 5 0.6044444 49 4 0.734343 70 5 0.8466667 93 5 0.7733333 38 5 0.800344 169 5 0.737521 48 5 0.805210 52 4 0.884615 67 4 0.850278 48 4 0.7908043 116 5 0.7741392 50 5 0.8579710 60 4 NA 0 0 0.8048617 73 5 0.8533333 31 5 0.7482540 40 5 0.8857143 73 5 0.834233 87 5 0.808885 144 5 0.7801399 40 5 0.822727 34 2 0.854248 77 5 0.8500000 13 2 0.9428571 29 5 0.790630 91 5 0.582564 28 2 0.900000 12 0 0.689804 50 5 0.869925 101 5 0.7720930 111 5 0.786021 230 5 0.8079365 53 4 0.738850 58 5 0.682965 83 5 0.8086247 49 5 0.680921 48 3 0.690393 127 5 0.8375758 128 5 0.8250260 186 5 0.8413743 118 5 0.7928632 156 5 0.774188 121 5 0.7364660 0.6177588 0.6684365 0.8482906 0.7561254 0.761786 0.7625794 0.757243 0.8274162 0.8016975 0.7596686 0.752080 0.808931 NA 0.7510557 0.8233618 0.7632207 0.9004884 0.8195790 0.7640024 0.7702947 0.7647630 0.872340 0.8137315 0.9145299 0.785131 0.5437212 0.850427 0.6856042 0.805443 0.7103955 0.752476 0.7340931 0.6801845 0.5716454 0.73216385 0.657361 0.650303 0.8090391 0.8182339 0.8192239 0.7760665 0.7186908 2 0.781547 0.767157 6.3081e-03 5 0.794907 0.792720 0.00218647 5.4490e-01 4.2279e-01 insignificant 1.000000 1.000000 insignificant 0.7908728 1.3344e-01 insignificant 1 1.000000 insignificant -5.6181e-03 0.86119038 lowCoverage 1.00000 lowCoverage 0.781547 0.6674641 0.0992124 5 0.794907 0.7282572 6.6650e-02 1.5971e-04 8.6301e-01 weaklyHypermeth 1.2099e-03 1.0000e+00 weaklyHypermeth 8.1157e-04 9.0638e-01 weaklyHypermeth 8.9183e-03 1.0000e+00 weaklyHypermeth 6.2851e-02 5.8214e-02 lowCoverage 4.4101e-01 lowCoverage 0.781547 0.8321580 -0.0199684 5 0.794907 0.813225 -0.01831779 8.6669e-01 1.3565e-01 insignificant 1.0000e+00 1.0000000 insignificant 7.6955e-01 1.4704e-01 insignificant 1.0000e+00 1.000000 insignificant -0.01640595 4.2593e-01 lowCoverage 1.0000e+00 lowCoverage 0.767157 0.6674641 0.09479303 5 0.792720 0.7282572 0.0644631 8.1694e-04 9.3367e-01 weaklyHypermeth 5.6732e-03 1.0000e+00 weaklyHypermeth 7.3758e-04 9.9592e-01 weaklyHypermeth 9.5790e-03 1.0000e+00 weaklyHypermeth 0.06846908 8.5915e-02 lowCoverage 5.7277e-01 lowCoverage 0.767157 0.8321580 -2.6158e-02 5 0.792720 0.813225 -2.0504e-02 9.3757e-01 2.0082e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.3143e-01 0.69413018 insignificant 1.0000e+00 1.00000 insignificant -0.01078785 7.3078e-01 lowCoverage 1.000000 lowCoverage 0.667464 0.8321580 -0.1222785 5 0.7282572 0.813225 -0.0849673 8.7696e-01 2.8012e-04 weaklyHypometh 1.0000e+00 2.9180e-03 weaklyHypometh 9.3234e-01 1.1368e-03 weaklyHypometh 1.0000000 1.7224e-02 weaklyHypometh -0.07925692 2.3801e-02 lowCoverage 2.4287e-01 lowCoverage chr22 40017096 40018096 57265 RANGAP1 ENSG00000100401 0.6803099 106 5 0.7238872 114 6 0.665801 51 6 0.8409003 128 5 0.8067308 59 5 0.818526 235 7 0.760620 79 6 0.786275 106 6 0.795711 54 4 0.914815 58 6 0.8935829 164 6 0.6333333 20 2 0.7986270 77 6 0.7052503 54 5 0.7884804 65 5 0.7896825 24 3 0.1875000 9 0 0.7162641 92 5 0.781713 131 5 0.534777 187 6 0.8005952 44 5 0.792906 66 5 0.814394 56 5 0.8446429 50 3 0.6066498 52 5 0.614966 119 6 0.864006 54 5 0.828704 32 2 0.882784 48 5 0.753786 137 6 0.7654357 124 5 0.838487 218 6 0.7366522 128 6 0.771564 74 5 0.637381 102 5 0.2500000 8 0 0.707239 57 6 0.812219 149 6 0.7720619 99 5 0.8848206 102 5 0.7663636 117 5 0.8179894 57 5 0.645098 88 5 0.7893162 0.6876814 0.6433455 0.7939885 0.7619494 0.806596 0.7447095 0.765510 0.7305430 0.8938272 0.8122108 0.646154 0.810972 0.7389458 0.7810583 0.7918193 0.3803419 0.7096990 0.7616081 0.8145749 0.7702991 0.7958032 0.758838 0.7939103 0.7131896 0.795370 0.8404582 0.827991 0.8141260 0.714946 0.7497978 0.745683 0.7308987 0.6498875 0.6263919 0.47794404 0.669334 0.725567 0.7486988 0.8518623 0.7493862 0.8059422 0.8106586 2 0.776062 0.766000 5.7275e-03 5 0.715081 0.753670 -0.03858890 5.2975e-02 2.5612e-01 insignificant 1.000000 1.000000 insignificant 0.2022692 3.5925e-02 inconclusive 1 1.000000 insignificant -5.2807e-02 0.23147994 lowCoverage 1.00000 lowCoverage 0.776543 0.6930502 0.0799567 6 0.720901 0.7807146 -5.9813e-02 1.7210e-03 8.9874e-01 weaklyHypermeth 1.0756e-02 1.0000e+00 weaklyHypermeth 1.4775e-02 9.2503e-01 weaklyHypermeth 1.1109e-01 1.0000e+00 insignificant 7.8630e-02 4.1679e-01 lowCoverage 1.0000e+00 lowCoverage 0.776855 0.7753780 -0.0225649 5 0.744358 0.811625 -0.06726701 9.3586e-01 1.5580e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.8704e-01 1.6480e-01 insignificant 1.0000e+00 1.000000 insignificant -0.04612741 3.9742e-01 lowCoverage 1.0000e+00 lowCoverage 0.764646 0.6930502 0.07503875 5 0.726708 0.7807146 -0.0540071 1.2327e-02 8.3572e-01 weaklyHypermeth 6.8864e-02 1.0000e+00 weaklyHypermeth 2.3408e-03 9.3132e-01 weaklyHypermeth 2.3176e-02 1.0000e+00 weaklyHypermeth 0.13143704 1.8587e-01 lowCoverage 1.0000e+00 lowCoverage 0.765829 0.7753780 -2.8147e-02 5 0.735967 0.811625 -7.5658e-02 9.0461e-01 2.5892e-02 weaklyHypometh 1.0000e+00 8.0913e-01 insignificant 6.9936e-01 0.14314473 insignificant 1.0000e+00 1.00000 insignificant 0.00667964 8.9053e-01 lowCoverage 1.000000 lowCoverage 0.691262 0.7744035 -0.1066019 5 0.7180616 0.757804 -0.0397421 9.9801e-01 1.2505e-03 weaklyHypometh 1.0000e+00 1.0969e-02 weaklyHypometh 9.9991e-01 4.4761e-04 weaklyHypometh 1.0000000 7.7174e-03 weaklyHypometh -0.12475740 2.2067e-01 lowCoverage 1.0000e+00 lowCoverage chr22 40038996 40039996 57267 RANGAP1 ENSG00000100401 0.6646011 226 7 0.7098039 68 4 0.711111 25 4 0.8385219 155 7 0.6818027 38 5 0.653330 73 4 0.523810 26 1 0.933766 43 4 0.595238 17 1 0.611111 24 3 0.7831553 103 4 0.7142857 17 0 0.6241497 57 5 0.6785714 22 1 0.7690476 51 7 0.1750000 21 3 0.5000000 3 0 0.7928746 158 7 0.738095 38 4 0.892857 38 4 0.6666667 4 0 1.000000 3 0 0.676004 134 7 0.8259259 28 4 0.6111111 16 1 0.549603 93 4 0.666667 6 0 0.500000 9 0 0.929273 55 7 0.567669 74 4 0.6928442 80 4 0.777922 46 4 0.4776099 63 4 0.670130 33 4 0.717507 68 4 0.7857143 16 0 0.282523 57 4 0.882653 28 3 0.6668821 302 7 0.6817539 162 7 0.7077185 174 7 0.8475501 147 7 0.746651 176 7 0.8522727 0.7026738 0.8454545 0.8965473 0.7159091 0.698565 0.6439394 0.884298 0.7272727 0.9545455 0.7619030 0.863636 0.825758 0.8863636 0.7954545 0.4545455 0.7109865 0.8359220 0.6767677 0.9220779 0.8322381 1.0000000 0.715285 0.8787879 0.6818182 0.734848 0.8322381 0.863636 0.9297521 0.837321 0.7640646 0.700000 0.4436189 0.5891381 0.7758467 0.68181818 0.551600 0.814935 0.7748918 0.8787879 0.8715058 0.9220779 0.9090909 0 0.733167 0.709854 2.8239e-02 4 0.707229 0.634577 0.07265195 2.7166e-01 9.4229e-01 lowCoverage 1.000000 1.000000 lowCoverage 0.7743801 6.3660e-01 lowCoverage 1 1.000000 lowCoverage -2.5751e-02 0.65540527 lowCoverage 1.00000 lowCoverage 0.734797 0.6075472 0.1360818 4 0.724230 0.6177782 1.0645e-01 1.0076e-05 9.7275e-01 lowCoverage 8.8383e-05 1.0000e+00 lowCoverage 2.1848e-02 7.1662e-01 lowCoverage 1.5495e-01 1.0000e+00 lowCoverage 4.3534e-02 6.6676e-01 lowCoverage 1.0000e+00 lowCoverage 0.733167 0.7721124 -0.0485206 7 0.707229 0.714944 -0.00771527 9.0513e-01 1.6265e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.2423e-01 2.6235e-01 insignificant 1.0000e+00 1.000000 insignificant -0.05055461 3.1438e-01 lowCoverage 1.0000e+00 lowCoverage 0.714815 0.6075472 0.10779829 4 0.708742 0.6177782 0.0909639 1.3087e-04 9.7646e-01 lowCoverage 1.0387e-03 1.0000e+00 lowCoverage 2.5163e-02 9.3038e-01 lowCoverage 1.7597e-01 1.0000e+00 lowCoverage 0.06928429 5.0865e-01 lowCoverage 1.0000e+00 lowCoverage 0.709854 0.7721124 -7.6577e-02 4 0.634577 0.714944 -8.0367e-02 9.9674e-01 1.8160e-02 lowCoverage 1.0000e+00 7.7711e-01 lowCoverage 9.3159e-01 0.46827971 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.02480407 6.5615e-01 lowCoverage 1.000000 lowCoverage 0.607547 0.7784878 -0.1877027 4 0.6177782 0.776357 -0.1585789 9.9759e-01 1.4110e-04 lowCoverage 1.0000e+00 1.6034e-03 lowCoverage 9.5119e-01 2.3474e-02 lowCoverage 1.0000000 1.8779e-01 lowCoverage -0.09408836 3.6014e-01 lowCoverage 1.0000e+00 lowCoverage chr22 40094396 40095396 57269 TEF ENSG00000167074 0.9384357 324 7 0.8740592 291 7 0.892703 145 7 0.9337749 331 7 0.9312792 75 6 0.817970 493 7 0.888713 173 7 0.716287 157 7 0.896626 105 7 0.912449 126 6 0.9155233 305 7 0.7611111 42 3 0.8975984 140 7 0.9312642 81 7 0.9514251 193 7 0.9610390 53 6 0.0000000 3 0 0.7384179 527 7 0.942484 227 7 0.956979 330 7 0.6734025 105 7 0.848136 101 4 0.941381 200 6 0.6302924 95 7 0.9198980 113 6 0.907111 301 7 0.920168 193 7 0.683539 98 7 0.855180 200 7 0.935163 316 7 0.9113922 297 7 0.934450 334 7 0.1677077 254 7 0.221570 255 7 0.107679 263 5 1.0000000 2 0 0.123761 203 7 0.472944 389 7 0.9457014 198 6 0.9187014 302 7 0.9535243 222 5 0.8969959 514 5 0.860799 223 6 0.9416433 0.8231920 0.8953038 0.9454991 0.9340927 0.926095 0.9121949 0.908558 0.8866854 0.9238694 0.9197300 0.781306 0.904577 0.9114017 0.9581331 0.9807620 NA 0.9206819 0.9324623 0.9417693 0.9066375 0.9441654 0.926764 0.8806270 0.9494813 0.905027 0.8976799 0.895758 0.8481356 0.921784 0.8708959 0.925841 0.1090194 0.1347016 0.2631758 NA 0.107643 0.303702 0.9320078 0.9119563 0.9275872 0.9004120 0.8427223 3 0.920650 0.911139 1.0312e-02 7 0.752808 0.742985 0.00982266 2.2476e-01 8.5278e-01 insignificant 1.000000 1.000000 insignificant 0.8208778 6.0986e-01 insignificant 1 1.000000 insignificant -3.7691e-03 0.94845358 insignificant 1.00000 insignificant 0.920650 0.1848863 0.7474638 7 0.752808 0.1669286 5.8588e-01 6.5366e-69 1.0000e+00 hypermethylated 1.3073e-66 1.0000e+00 hypermethylated 1.6740e-12 1.0000e+00 hypermethylated 9.3002e-11 1.0000e+00 hypermethylated 4.9396e-01 1.5385e-02 weaklyHypermeth 1.5083e-01 insignificant 0.921974 0.8971193 0.0219289 6 0.920277 0.913432 0.00684467 2.8657e-02 7.4231e-01 weaklyHypermeth 4.9409e-01 1.0000000 insignificant 1.4054e-01 8.2421e-01 insignificant 1.0000e+00 1.000000 insignificant -0.07223745 1.6369e-01 insignificant 1.0000e+00 insignificant 0.911177 0.1854839 0.72650804 7 0.768687 0.2502357 0.5184512 2.6802e-41 1.0000e+00 hypermethylated 4.4671e-39 1.0000e+00 hypermethylated 2.7470e-10 1.0000e+00 hypermethylated 1.3081e-08 1.0000e+00 hypermethylated 0.49773241 1.5670e-02 weaklyHypermeth 1.5930e-01 insignificant 0.916916 0.8971899 9.4738e-03 6 0.920234 0.924253 -4.0197e-03 4.3249e-01 8.3933e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.2491e-01 0.89301149 insignificant 1.0000e+00 1.00000 insignificant -0.06846834 8.7200e-02 insignificant 1.000000 insignificant 0.185893 0.8971899 -0.7372719 6 0.3127947 0.924253 -0.6114587 1.0000e+00 3.4970e-23 hypomethylated 1.0000e+00 3.8855e-21 hypomethylated 1.0000e+00 9.2221e-08 hypomethylated 1.0000000 7.6851e-06 hypomethylated -0.56620074 9.9050e-03 weaklyHypometh 1.2228e-01 insignificant chr22 40291296 40292296 57278 CSDC2 ENSG00000172346 0.9190370 131 6 0.8293314 83 6 0.576299 50 5 0.8856086 156 7 0.7200000 33 4 0.874688 176 5 0.816545 38 2 0.798457 115 5 0.820042 72 5 0.832613 57 5 0.8145776 132 6 0.6845238 34 4 0.5743311 153 5 0.8374741 65 3 0.5634921 61 4 0.6785714 20 2 0.9911954 184 2 0.7309921 163 7 0.769553 98 6 0.868660 133 6 0.8754630 26 3 0.759091 64 3 0.848522 101 5 0.8041311 59 5 0.6970203 51 3 0.794081 139 6 0.616389 61 3 0.816667 19 1 0.773366 98 5 0.837107 184 6 0.7576389 117 5 0.889264 147 6 0.5267603 107 6 0.584554 50 5 0.648148 40 3 0.4444444 12 0 0.643007 90 6 0.372320 160 6 0.9032029 86 5 0.7990905 129 4 0.8979381 129 5 0.7458922 84 5 0.731174 138 5 0.9262744 0.8159595 0.6947137 0.8852723 0.8394366 0.799334 0.7425579 0.798902 0.8214750 0.8657908 0.8071647 0.800469 0.584743 0.8162890 0.7402191 0.5513078 0.9900794 0.6977055 0.7287848 0.8264624 0.8625196 0.7630377 0.835600 0.7512597 0.7354184 0.770098 0.7546244 0.788732 0.7434033 0.794731 0.7016432 0.858693 0.5684879 0.6515503 0.6776977 0.62910798 0.640225 0.372855 0.8410463 0.7881909 0.8312301 0.7860084 0.7105221 0 0.794268 0.802064 -1.5783e-02 5 0.811594 0.829407 -0.01781317 4.5390e-01 2.5345e-01 insignificant 1.000000 1.000000 insignificant 0.5928933 4.8316e-01 insignificant 1 1.000000 insignificant -9.7622e-03 0.77803931 lowCoverage 1.00000 lowCoverage 0.794268 0.4357298 0.3118252 5 0.811594 0.5312945 2.8030e-01 6.6830e-14 9.9070e-01 hypermethylated 1.1934e-12 1.0000e+00 hypermethylated 1.0767e-04 9.8444e-01 hypermethylated 1.5834e-03 1.0000e+00 hypermethylated 2.4276e-01 1.3625e-03 lowCoverage 2.1289e-02 lowCoverage 0.794268 0.8074205 0.0022231 4 0.811594 0.814271 -0.00267734 7.1027e-01 5.8973e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 7.8256e-01 3.9859e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage -0.03616006 4.4283e-01 lowCoverage 1.0000e+00 lowCoverage 0.802064 0.4357298 0.32560084 5 0.829407 0.5312945 0.2981126 2.3682e-13 9.9998e-01 hypermethylated 4.6436e-12 1.0000e+00 hypermethylated 2.3643e-04 9.9964e-01 hypermethylated 3.6373e-03 1.0000e+00 hypermethylated 0.25252265 1.2788e-03 lowCoverage 1.9673e-02 lowCoverage 0.802064 0.8074205 1.9284e-02 4 0.829407 0.814271 1.5136e-02 3.2652e-01 5.1249e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 6.9931e-01 0.46872163 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.02639790 5.5599e-01 lowCoverage 1.000000 lowCoverage 0.435730 0.8074205 -0.3651055 5 0.5312945 0.814271 -0.2829768 9.7371e-01 2.4919e-09 hypomethylated 1.0000e+00 6.0777e-08 hypomethylated 9.9532e-01 2.8463e-04 hypomethylated 1.0000000 5.3704e-03 hypomethylated -0.27892055 1.0160e-03 lowCoverage 2.3627e-02 lowCoverage chr22 40562996 40563996 57287 ENSG00000184068 0.7536614 235 6 0.6730505 153 6 0.493916 113 6 0.6754543 102 6 0.6301354 81 6 0.738218 295 6 0.725543 106 6 0.625310 87 6 0.626911 81 6 0.689085 103 5 0.6742365 232 6 0.7660256 53 4 0.6356672 107 6 0.9444444 13 1 0.7214604 110 6 0.5500000 47 5 0.5350877 78 4 0.6517845 175 6 0.733229 139 6 0.654276 241 6 0.6005291 55 6 0.667005 50 5 0.562882 147 6 0.5063985 84 6 0.8181818 49 5 0.672966 219 6 0.668019 76 6 0.619048 41 4 0.641458 105 5 0.728068 191 6 0.4953345 181 6 0.756902 262 6 0.5486000 129 6 0.612355 98 6 0.729113 144 6 0.7374709 54 4 0.476060 85 6 0.697337 181 6 0.6535188 170 6 0.7499433 169 6 0.8051760 140 6 0.5959355 184 6 0.786526 132 6 0.6406308 0.6145694 0.5479748 0.6062455 0.7114452 0.691908 0.6584477 0.557824 0.6069188 0.6885185 0.7081700 0.723419 0.680114 0.6576177 0.6734409 0.6097778 0.5666680 0.6582549 0.6714073 0.7176398 0.5461728 0.6538672 0.619688 0.6391283 0.7735758 0.667225 0.7628535 0.654709 0.6092620 0.682601 0.6178874 0.682884 0.6044056 0.5681901 0.7168472 0.65791639 0.538676 0.610180 0.7200863 0.6380695 0.7300097 0.6598504 0.7651178 5 0.667973 0.676712 4.6772e-03 6 0.665332 0.589937 0.07539539 1.9690e-02 7.1883e-01 weaklyHypermeth 1.000000 1.000000 insignificant 0.1811274 5.7235e-01 insignificant 1 1.000000 insignificant 3.0142e-02 0.40060863 insignificant 1.00000 insignificant 0.667973 0.6353111 0.0478342 6 0.665332 0.6021585 6.3173e-02 8.2473e-05 9.7150e-01 weaklyHypermeth 6.3932e-04 1.0000e+00 weaklyHypermeth 1.5293e-02 9.8080e-01 weaklyHypermeth 1.1413e-01 1.0000e+00 insignificant 4.1385e-02 4.1892e-01 insignificant 1.0000e+00 insignificant 0.667973 0.6893082 -0.0380363 6 0.665332 0.732407 -0.06707549 9.8047e-01 1.5243e-02 weaklyHypometh 1.0000e+00 0.4023605 insignificant 9.9625e-01 8.2155e-02 insignificant 1.0000e+00 1.000000 insignificant -0.04334510 3.7621e-01 insignificant 1.0000e+00 insignificant 0.676712 0.6353111 0.04301004 6 0.589937 0.6021585 -0.0122219 1.4431e-02 9.0414e-01 weaklyHypermeth 7.8007e-02 1.0000e+00 weaklyHypermeth 2.8226e-02 9.2102e-01 weaklyHypermeth 1.9333e-01 1.0000e+00 insignificant 0.01124332 8.3206e-01 insignificant 1.0000e+00 insignificant 0.676712 0.6893082 -4.2208e-02 6 0.589937 0.732407 -1.4247e-01 9.9862e-01 2.5687e-02 weaklyHypometh 1.0000e+00 8.0913e-01 insignificant 9.9924e-01 0.06782632 insignificant 1.0000e+00 1.00000 insignificant -0.07348727 1.7111e-01 insignificant 1.000000 insignificant 0.635311 0.6893082 -0.0862792 6 0.6021585 0.732407 -0.1302489 9.9861e-01 1.3271e-04 weaklyHypometh 1.0000e+00 1.5612e-03 weaklyHypometh 9.9946e-01 5.6069e-04 weaklyHypometh 1.0000000 9.5033e-03 weaklyHypometh -0.08473059 1.8598e-01 insignificant 8.9847e-01 insignificant chr22 41169596 41170596 57315 ENSG00000167087,ENSG00000213784 0.1324470 139 6 0.1404894 242 6 0.246850 155 5 0.0741071 133 6 0.2136508 111 5 0.225814 243 5 0.206553 164 5 0.066180 149 5 0.265441 138 5 0.264491 114 6 0.1888251 255 6 0.1000172 93 5 0.0738095 92 5 0.1358586 61 5 0.2133331 156 5 0.0847339 77 5 NA 0 0 0.1798649 109 6 0.095062 121 6 0.117489 224 5 0.1194444 65 5 0.040000 17 3 0.231419 169 6 0.1125000 127 6 0.0888889 28 3 0.135838 266 5 0.082929 136 5 0.035043 62 5 0.297438 116 5 0.187977 284 5 0.1992150 336 5 0.167963 204 6 0.0042553 263 5 0.011765 218 5 0.000000 160 6 NA 0 0 0.013084 214 5 0.015119 298 6 0.1527569 284 6 0.0843114 175 6 0.1181624 93 6 0.1487125 208 6 0.085583 134 6 0.1699130 0.1783613 0.2194450 0.0971733 0.1747416 0.296143 0.2234803 0.087849 0.1385542 0.2294523 0.2159012 0.123274 0.085590 0.1807554 0.1634517 0.1078099 NA 0.1997925 0.1262770 0.1605375 0.1562401 0.0360190 0.228465 0.1644550 0.0322275 0.125260 0.0993340 0.051914 0.1721012 0.189275 0.2124460 0.192009 0.0034285 0.0150544 0.0000000 NA 0.016609 0.021531 0.1270082 0.0858269 0.0918945 0.1127476 0.0642388 5 0.183357 0.171271 5.6319e-03 5 0.156707 0.157869 -0.00116201 4.0152e-01 3.6049e-01 insignificant 1.000000 1.000000 insignificant 0.4166731 7.7466e-01 insignificant 1 1.000000 insignificant 1.7657e-02 0.52825294 lowCoverage 1.00000 lowCoverage 0.183357 0.0121422 0.1706888 5 0.156707 0.0090378 1.4767e-01 4.4127e-11 1.0000e+00 weaklyHypermeth 5.9631e-10 1.0000e+00 weaklyHypermeth 1.2599e-09 1.0000e+00 weaklyHypermeth 4.1996e-08 1.0000e+00 weaklyHypermeth 1.5037e-01 1.2011e-08 lowCoverage 6.3217e-07 lowCoverage 0.183357 0.1263982 0.0677583 5 0.156707 0.127863 0.02884358 1.1353e-03 2.2204e-02 weaklyHypermeth 3.1017e-02 0.5191467 weaklyHypermeth 2.8430e-03 3.0872e-01 weaklyHypermeth 1.0935e-01 1.000000 insignificant 0.04130628 7.4887e-02 insignificant 9.3583e-01 insignificant 0.171271 0.0121422 0.15901637 5 0.157869 0.0090378 0.1488311 6.2344e-11 1.0000e+00 weaklyHypermeth 1.0391e-09 1.0000e+00 weaklyHypermeth 1.4337e-05 1.0000e+00 weaklyHypermeth 2.9260e-04 1.0000e+00 weaklyHypermeth 0.13270999 1.0403e-04 lowCoverage 2.8116e-03 lowCoverage 0.171271 0.1263982 6.3091e-02 5 0.157869 0.127863 3.0006e-02 8.9067e-03 5.9444e-01 weaklyHypermeth 1.7100e-01 1.0000e+00 insignificant 2.1125e-01 0.59811862 insignificant 1.0000e+00 1.00000 insignificant 0.02364944 3.9540e-01 lowCoverage 1.000000 lowCoverage 0.012142 0.1263982 -0.1076716 6 0.0090378 0.127863 -0.1188255 1.0000e+00 4.2776e-08 weaklyHypometh 1.0000e+00 8.9116e-07 weaklyHypometh 9.9998e-01 7.5700e-05 weaklyHypometh 1.0000000 2.0459e-03 weaklyHypometh -0.10906055 1.4275e-03 lowCoverage 2.9739e-02 lowCoverage chr22 41400096 41401096 57327 CYB5R3 ENSG00000100243 0.7009688 78 5 0.6077273 58 5 0.586667 34 5 0.8384266 91 5 0.7822222 50 4 0.730159 36 4 0.666667 54 5 0.798396 53 4 0.731818 57 5 0.692857 32 2 0.6884936 137 5 0.7318182 21 1 0.7966667 64 5 0.9454545 31 2 0.7952381 37 2 0.9230769 16 1 1.0000000 1 0 0.7494444 47 4 0.809086 61 4 0.849537 42 5 0.5857143 47 5 0.750000 39 3 0.704615 42 2 0.6794444 39 5 0.7972059 62 4 0.699333 91 4 0.649569 116 5 0.520000 28 3 0.678571 43 2 0.682418 62 5 0.7225108 75 5 0.842857 56 5 0.6649206 63 5 0.536975 60 4 0.662222 82 5 0.6000000 8 0 0.622857 59 5 0.629004 61 5 0.8789377 64 4 0.8850000 66 5 0.7856303 141 4 0.6250000 21 1 0.707851 77 4 0.7058587 0.6200686 0.5974843 0.8420816 0.7870021 0.737047 0.6742138 0.805368 0.7387078 0.7048518 0.6872097 0.738851 0.801797 0.9433962 0.8000898 0.7936000 NA 0.7055346 0.7982757 0.8273061 0.5956873 0.7917171 0.710885 0.6875262 0.8064650 0.700629 0.6552538 0.539623 0.6900270 0.696040 0.7238095 0.846361 0.6717580 0.5429681 0.6605870 0.62264151 0.629111 0.634322 0.8792764 0.8877358 0.7908911 0.7415577 0.7094505 0 0.766064 0.701429 3.7554e-02 5 0.744030 0.707337 0.03669239 1.0836e-01 8.7255e-01 insignificant 1.000000 1.000000 insignificant 0.0810645 9.8997e-01 insignificant 1 1.000000 insignificant 7.8550e-02 0.03037288 lowCoverage 1.00000 lowCoverage 0.766064 0.6336336 0.1193972 5 0.744030 0.6211597 1.2287e-01 3.6852e-05 9.9993e-01 weaklyHypermeth 2.9482e-04 1.0000e+00 weaklyHypermeth 1.2505e-03 9.9998e-01 weaklyHypermeth 1.2382e-02 1.0000e+00 weaklyHypermeth 1.5191e-01 7.8292e-05 lowCoverage 1.9573e-03 lowCoverage 0.766064 0.8319783 -0.0625104 4 0.744030 0.790441 -0.04641088 6.7788e-01 4.0568e-02 lowCoverage 1.0000e+00 0.6957324 lowCoverage 9.1694e-01 7.9951e-02 lowCoverage 1.0000e+00 1.000000 lowCoverage -0.00524760 9.2761e-01 lowCoverage 1.0000e+00 lowCoverage 0.701429 0.6336336 0.08103753 5 0.707337 0.6211597 0.0861778 1.3821e-03 9.9166e-01 weaklyHypermeth 9.2761e-03 1.0000e+00 weaklyHypermeth 1.0417e-01 9.8997e-01 insignificant 5.5657e-01 1.0000e+00 insignificant 0.07335676 3.3375e-02 lowCoverage 2.9397e-01 lowCoverage 0.701429 0.8319783 -1.0601e-01 4 0.707337 0.790441 -8.3103e-02 9.6216e-01 1.2337e-02 lowCoverage 1.0000e+00 7.1852e-01 lowCoverage 9.8957e-01 0.00519937 lowCoverage 1.0000e+00 0.57557 lowCoverage -0.08379716 1.8343e-01 lowCoverage 1.000000 lowCoverage 0.633634 0.8319783 -0.1758483 4 0.6211597 0.790441 -0.1692811 9.9990e-01 2.7995e-04 lowCoverage 1.0000e+00 2.9180e-03 lowCoverage 9.9958e-01 1.6783e-03 lowCoverage 1.0000000 2.4680e-02 lowCoverage -0.15715392 3.1148e-02 lowCoverage 2.7564e-01 lowCoverage chr22 41485296 41486296 57336 A4GALT ENSG00000128274 0.7951750 178 6 0.7766685 138 6 0.663731 60 5 0.6810800 111 7 0.6772023 81 6 0.732601 123 7 0.805655 90 6 0.746054 155 7 0.713573 78 7 0.658841 60 5 0.8276169 278 7 0.7338435 39 5 0.7653935 124 7 0.6647436 51 4 0.5801768 78 6 0.6750000 24 2 0.7250000 16 2 0.8039744 150 6 0.819317 182 6 0.725477 123 6 0.8230159 72 5 0.857143 37 5 0.795314 60 4 0.6687778 80 7 0.7197199 237 7 0.777121 161 7 0.805114 108 7 0.658532 36 3 0.651209 163 6 0.793006 144 7 0.5581554 162 7 0.650160 126 7 0.6914274 149 7 0.656579 217 7 0.418251 124 6 0.7460884 55 5 0.563736 115 7 0.812707 167 6 0.8151271 87 6 0.7355124 145 7 0.7311130 154 7 0.7330484 110 3 0.785834 132 7 0.8574002 0.7748576 0.7985423 0.7195258 0.7666713 0.751696 0.7799445 0.722901 0.7415567 0.6967266 0.7607959 0.713994 0.744859 0.7472330 0.7777468 0.7100250 0.7830327 0.8247906 0.8421988 0.8842536 0.8159509 0.9161554 0.838347 0.6925630 0.8046905 0.813116 0.7971626 0.744415 0.6782728 0.797190 0.7887356 0.784770 0.7774026 0.6835543 0.5058222 0.75094946 0.671844 0.804617 0.8442733 0.7925534 0.8247994 0.8526113 0.8347761 3 0.795231 0.798556 -2.8057e-03 6 0.596587 0.694857 -0.09827080 6.3277e-01 6.7569e-01 insignificant 1.000000 1.000000 insignificant 0.8380297 5.4811e-01 insignificant 1 1.000000 insignificant -1.2162e-03 0.96830416 insignificant 1.00000 insignificant 0.796714 0.7037485 0.0841078 6 0.728213 0.5928633 1.3535e-01 1.0705e-01 9.6547e-01 insignificant 4.9106e-01 1.0000e+00 insignificant 9.0095e-02 9.1255e-01 insignificant 5.1190e-01 1.0000e+00 insignificant 8.0425e-02 2.2565e-01 insignificant 1.0000e+00 insignificant 0.795487 0.8550955 -0.0448199 6 0.677164 0.676786 0.00037798 8.7819e-01 9.8751e-02 insignificant 1.0000e+00 1.0000000 insignificant 9.8866e-01 8.0987e-02 insignificant 1.0000e+00 1.000000 insignificant -0.03157077 1.8919e-01 insignificant 1.0000e+00 insignificant 0.798258 0.7037485 0.09193761 7 0.575620 0.5928633 -0.0172437 2.9570e-02 9.8917e-01 weaklyHypermeth 1.4859e-01 1.0000e+00 insignificant 1.2938e-01 9.7895e-01 insignificant 6.7039e-01 1.0000e+00 insignificant 0.08164077 2.3578e-01 insignificant 1.0000e+00 insignificant 0.801605 0.8550955 -3.8546e-02 7 0.674806 0.676786 -1.9800e-03 8.2378e-01 1.4711e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.1332e-01 0.31339466 insignificant 1.0000e+00 1.00000 insignificant -0.03035459 3.5010e-01 insignificant 1.000000 insignificant 0.711491 0.8562300 -0.1266188 7 0.6587370 0.716071 -0.0573344 7.7377e-01 3.3032e-02 weaklyHypometh 1.0000e+00 1.8875e-01 insignificant 8.3641e-01 5.8702e-02 insignificant 1.0000000 3.7390e-01 insignificant -0.11199536 1.1144e-01 insignificant 6.4049e-01 insignificant chr22 41676696 41677696 57344 PACSIN2 ENSG00000100266 0.7207063 304 4 0.8670608 248 5 0.773554 186 5 0.8082529 266 4 0.8299570 168 5 0.871850 374 4 0.839167 168 5 0.884384 215 5 0.811144 180 5 0.540707 147 5 0.8811941 219 5 0.7417191 104 5 0.7382353 175 5 0.8677075 81 3 0.8701299 171 5 0.8870215 68 4 0.6238095 34 3 0.8270571 414 4 0.806691 256 5 0.868159 254 4 0.9295002 85 4 0.745213 93 3 0.744612 189 5 0.9030303 69 4 0.9164724 70 3 0.836217 236 4 0.756466 156 5 0.868003 66 4 0.862312 268 4 0.854566 277 4 0.8313476 286 4 0.857587 273 5 0.7548644 243 5 0.614601 182 5 0.511551 174 3 0.6725146 34 3 0.626078 129 5 0.832486 264 4 0.8964611 220 4 0.7058352 215 4 0.7078048 333 4 0.6813184 323 3 0.747505 215 4 0.8004387 0.7639767 0.7514249 0.7987072 0.7454674 0.878374 0.8181798 0.888495 0.7269365 0.7482162 0.8673176 0.760807 0.600584 0.8192984 0.7586993 0.8532192 0.7467466 0.7655880 0.7438135 0.8166679 0.9088662 0.6521220 0.851969 0.8315984 0.9240317 0.816247 0.7761775 0.821095 0.8541422 0.824688 0.8371536 0.784920 0.7016841 0.3429875 0.5271198 0.81534744 0.412641 0.820890 0.8110120 0.6706662 0.6704301 0.6842927 0.7305798 3 0.812531 0.843327 -2.9400e-02 4 0.667997 0.867308 -0.19931093 9.8462e-01 1.7932e-01 lowCoverage 1.000000 1.000000 lowCoverage 0.9963584 3.6586e-02 lowCoverage 1 1.000000 lowCoverage -3.9185e-02 0.16632648 lowCoverage 1.00000 lowCoverage 0.812889 0.6822612 0.1714192 5 0.835196 0.7248012 1.1039e-01 4.4142e-05 9.3664e-01 weaklyHypermeth 3.4757e-04 1.0000e+00 weaklyHypermeth 2.8055e-02 7.1643e-01 weaklyHypermeth 1.9216e-01 1.0000e+00 insignificant 1.3424e-01 3.1971e-02 lowCoverage 2.8293e-01 lowCoverage 0.812531 0.7029096 0.0970123 4 0.667997 0.847495 -0.17949774 8.5683e-03 9.5663e-01 lowCoverage 1.8627e-01 1.0000000 lowCoverage 1.7647e-01 9.4186e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 0.05514049 2.5139e-01 lowCoverage 1.0000e+00 lowCoverage 0.843128 0.6822612 0.20589581 4 0.854231 0.7248012 0.1294300 2.9041e-04 9.8669e-01 lowCoverage 2.1672e-03 1.0000e+00 lowCoverage 1.1553e-02 9.9412e-01 lowCoverage 8.9562e-02 1.0000e+00 lowCoverage 0.17342830 1.0935e-02 lowCoverage 1.2569e-01 lowCoverage 0.843327 0.7029096 1.2861e-01 4 0.867308 0.847495 1.9813e-02 3.0244e-03 9.8729e-01 lowCoverage 7.0941e-02 1.0000e+00 lowCoverage 4.6335e-02 0.99592661 lowCoverage 9.8585e-01 1.00000 lowCoverage 0.09432588 7.0474e-02 lowCoverage 1.000000 lowCoverage 0.682261 0.7024540 -0.1006118 4 0.7248012 0.786493 -0.0616915 8.5209e-01 2.6547e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.2091e-01 5.0128e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage -0.07910242 2.2109e-01 lowCoverage 1.0000e+00 lowCoverage chr22 41693296 41694296 57349 PACSIN2 ENSG00000100266 0.8258600 387 8 0.6246649 157 8 0.559456 123 8 0.8324835 243 8 0.7406798 63 8 0.802849 487 8 0.627755 100 8 0.754948 136 7 0.732935 117 8 0.591964 109 8 0.8514437 359 8 0.3642857 41 4 0.8315549 113 8 1.0000000 21 1 0.7779217 106 8 0.7264069 55 3 0.8769841 59 4 0.8456457 237 8 0.654712 135 8 0.805026 361 8 0.8913123 92 3 0.890625 98 8 0.695537 199 8 0.7612626 67 8 0.7964286 54 7 0.766913 198 8 0.788393 87 4 0.774219 72 4 0.835420 113 8 0.830763 188 8 0.7808532 125 8 0.828823 423 8 0.7961813 107 8 0.614102 129 8 0.750887 154 8 0.8813131 83 5 0.750023 178 8 0.727539 194 8 0.7493147 396 8 0.8693951 336 8 0.7777166 334 8 0.8587088 252 8 0.833316 284 8 0.8267538 0.7009781 0.6128709 0.8846888 0.7584567 0.856462 0.6925012 0.782274 0.7739519 0.7680664 0.8796174 0.520085 0.842599 0.8962018 0.8365082 0.6962240 0.8430990 0.8526859 0.7420703 0.8953465 0.8660496 0.9003364 0.759979 0.8271800 0.8183594 0.826233 0.8782366 0.809937 0.8088732 0.813858 0.7851873 0.857334 0.8376406 0.6626232 0.7796032 0.82007970 0.804001 0.776353 0.8435728 0.8950777 0.8325643 0.8693452 0.8750931 3 0.811675 0.831002 -1.7374e-02 8 0.755952 0.823808 -0.06785533 8.8556e-01 2.1775e-01 insignificant 1.000000 1.000000 insignificant 0.9976256 3.4621e-02 weaklyHypometh 1 1.000000 insignificant -6.2000e-02 0.08964525 insignificant 1.00000 insignificant 0.812979 0.7775148 0.0362035 8 0.807936 0.7728612 3.5075e-02 8.1016e-02 9.9625e-01 insignificant 3.7858e-01 1.0000e+00 insignificant 4.7662e-01 9.2761e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -1.1962e-02 8.0503e-01 insignificant 1.0000e+00 insignificant 0.811675 0.8420724 -0.0375869 8 0.755952 0.793566 -0.03761426 9.8583e-01 2.2357e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.9913e-01 2.7608e-02 weaklyHypometh 1.0000e+00 0.658794 insignificant -0.07631134 6.5877e-02 insignificant 8.7836e-01 insignificant 0.830697 0.7775148 0.05198660 8 0.787299 0.7728612 0.0144377 1.1400e-02 9.8060e-01 weaklyHypermeth 6.4044e-02 1.0000e+00 weaklyHypermeth 5.3952e-02 9.9208e-01 insignificant 3.2501e-01 1.0000e+00 insignificant 0.05003814 2.4168e-01 insignificant 1.0000e+00 insignificant 0.831002 0.8420724 -1.8731e-02 8 0.823808 0.793566 3.0241e-02 9.9450e-01 5.0992e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.5713e-01 0.54114293 insignificant 1.0000e+00 1.00000 insignificant -0.01431113 6.2691e-01 insignificant 1.000000 insignificant 0.777515 0.8424015 -0.0736259 8 0.7728612 0.835866 -0.0630052 9.9900e-01 7.0354e-04 weaklyHypometh 1.0000e+00 6.7648e-03 weaklyHypometh 9.9828e-01 8.5680e-03 weaklyHypometh 1.0000000 8.8330e-02 weaklyHypometh -0.06434928 1.6857e-01 insignificant 8.3866e-01 insignificant chr22 41737896 41738896 57358 PACSIN2 ENSG00000100266 0.3916274 58 5 0.4884848 38 5 0.363636 25 2 0.4742115 76 5 0.6201299 39 2 0.550150 84 5 0.390306 42 5 0.422269 60 5 0.533333 45 3 0.566667 26 4 0.6180169 75 5 0.5476190 20 0 0.5679012 48 5 0.6952914 47 5 0.4555556 50 5 0.5000000 4 0 NA 0 0 0.5841837 32 4 0.370000 41 5 0.449351 29 2 0.3333333 13 1 0.500000 9 0 0.428571 29 2 0.5000000 12 0 0.3649351 63 5 0.461950 71 5 0.866667 11 1 0.447917 31 3 0.451852 25 2 0.411538 82 5 0.5102041 32 4 0.342687 63 5 0.6355769 41 2 0.733333 32 2 0.434982 88 5 0.8666667 9 0 0.339286 31 4 0.422222 32 4 0.4571429 43 5 0.6111111 29 2 0.5600000 38 2 0.7857143 25 2 0.482143 48 2 0.3628002 0.4734007 0.3838384 0.5751804 0.6136364 0.510138 0.3591270 0.374183 0.4444444 0.5000000 0.6889530 0.407407 0.592593 0.7047915 0.4777778 0.5055484 NA 0.6964286 0.4092593 0.4929293 0.4713393 0.2777778 0.444444 0.5452359 0.4171717 0.578780 0.7777778 0.416667 0.5407407 0.353419 0.6349206 0.581349 0.6148504 0.4920635 0.4710012 0.77777778 0.402778 0.481481 0.5111111 0.6851852 0.5629630 0.7222222 0.5694444 0 0.528010 0.467120 5.7336e-02 4 0.523440 0.433932 0.08950827 6.7497e-02 9.6652e-01 lowCoverage 1.000000 1.000000 lowCoverage 0.3508836 8.6765e-01 lowCoverage 1 1.000000 lowCoverage 3.6366e-02 0.43549794 lowCoverage 1.00000 lowCoverage 0.528211 0.4763948 0.0587891 5 0.530137 0.4952452 3.4892e-02 2.3269e-01 4.5295e-01 insignificant 9.6771e-01 1.0000e+00 insignificant 9.1089e-01 2.2912e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -6.7341e-02 4.6912e-01 lowCoverage 1.0000e+00 lowCoverage 0.528211 0.5846995 -0.0484158 2 0.530137 0.579252 -0.04911464 5.4781e-01 3.7110e-02 lowCoverage 1.0000e+00 0.6654214 lowCoverage 8.0840e-01 2.7971e-02 lowCoverage 1.0000e+00 0.658794 lowCoverage -0.07455204 2.8374e-01 lowCoverage 1.0000e+00 lowCoverage 0.468966 0.4763948 0.00427707 4 0.462674 0.4952452 -0.0325711 6.7969e-01 4.9098e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.6745e-01 3.3790e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -0.10370651 3.0084e-01 lowCoverage 1.0000e+00 lowCoverage 0.468966 0.5846995 -8.4700e-02 2 0.462674 0.579252 -1.1658e-01 9.6998e-01 1.4993e-02 lowCoverage 1.0000e+00 7.1852e-01 lowCoverage 9.8298e-01 0.01857861 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.11091764 1.5636e-01 lowCoverage 1.000000 lowCoverage 0.476395 0.5846995 -0.0922221 2 0.4952452 0.579252 -0.0840065 9.3230e-01 1.3742e-02 lowCoverage 1.0000e+00 8.8091e-02 lowCoverage 8.9189e-01 1.9971e-01 lowCoverage 1.0000000 9.8380e-01 lowCoverage -0.00721113 9.4550e-01 lowCoverage 1.0000e+00 lowCoverage chr22 41747396 41748396 57359 PACSIN2 ENSG00000100266 0.7188568 147 6 0.6592182 124 6 0.591146 59 6 0.8631997 126 6 0.7371795 78 6 0.479467 124 6 0.635319 119 6 0.677156 81 6 0.493483 88 6 0.763889 66 6 0.6851760 161 6 0.5781250 48 5 0.6569056 73 6 0.4427083 100 6 0.7257576 68 6 0.6083333 30 1 0.7453177 762 5 0.7857740 182 7 0.738889 75 6 0.853896 104 6 0.6761905 31 5 0.833333 14 0 0.827381 38 1 0.5714286 22 1 0.7958195 126 6 0.564722 146 6 0.841931 55 6 0.740741 44 5 0.809596 86 6 0.688826 123 6 0.8074495 74 6 0.718624 139 6 0.5985480 99 6 0.697382 112 6 0.636920 68 6 0.8095238 57 6 0.824424 73 6 0.830039 148 6 0.7863388 161 6 0.7513261 132 6 0.6007292 156 6 0.8317805 84 6 0.755117 98 6 0.7272563 0.6144155 0.7807671 0.8698153 0.7549305 0.659597 0.8528239 0.706108 0.6789438 0.7733795 0.8001267 0.784032 0.797203 0.6107616 0.7443107 0.6238411 0.7853044 0.8068030 0.7536424 0.8383002 0.7947020 0.8609272 0.839877 0.6931567 0.8046413 0.762321 0.8519132 0.942605 0.8204094 0.705423 0.8236755 0.741256 0.8005719 0.7120373 0.7529887 0.82024598 0.796746 0.789331 0.7986429 0.7632201 0.8098841 0.8286167 0.7710584 2 0.756788 0.807350 -2.2499e-02 6 0.590706 0.586403 0.00430349 2.3195e-01 8.8137e-02 insignificant 1.000000 1.000000 insignificant 0.8625391 6.4270e-02 insignificant 1 1.000000 insignificant -6.7680e-02 0.08863485 lowCoverage 1.00000 lowCoverage 0.756788 0.8025135 -0.0140942 6 0.590706 0.6562810 -6.5575e-02 8.0633e-01 9.0181e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6753e-01 1.7232e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -6.0816e-02 2.4573e-01 insignificant 1.0000e+00 insignificant 0.756819 0.8129952 -0.0240004 6 0.570795 0.585811 -0.01501590 8.7737e-01 1.3596e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.3529e-01 6.4523e-02 insignificant 1.0000e+00 1.000000 insignificant -0.07306852 1.5597e-01 insignificant 1.0000e+00 insignificant 0.807350 0.8025135 0.00790538 6 0.586403 0.6562810 -0.0698781 5.1951e-01 5.6105e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.2866e-01 6.5880e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.00686404 8.9444e-01 lowCoverage 1.0000e+00 lowCoverage 0.810962 0.8129952 5.1524e-03 6 0.659703 0.585811 7.3893e-02 3.9353e-01 6.4724e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.8039e-01 0.92729693 insignificant 1.0000e+00 1.00000 insignificant -0.00538811 9.1333e-01 lowCoverage 1.000000 lowCoverage 0.805054 0.8129952 -0.0036766 6 0.6966495 0.585811 0.1108388 4.2987e-01 1.9571e-01 insignificant 1.0000e+00 8.4725e-01 insignificant 6.5788e-01 2.8256e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.01225215 8.3463e-01 insignificant 1.0000e+00 insignificant chr22 41755196 41756196 57360 PACSIN2 ENSG00000100266 0.8854099 309 9 0.8321132 163 9 0.830307 161 10 0.8867117 249 9 0.9073810 63 5 0.910385 443 10 0.796605 126 8 0.807741 178 9 0.828390 147 9 0.821793 171 9 0.8660552 304 10 0.7470899 62 5 0.9365336 208 9 0.9358974 74 6 0.8416460 149 9 0.6099346 69 4 0.7966667 84 8 0.9008885 304 9 0.766019 153 9 0.916867 288 9 0.8668315 128 9 0.799082 162 9 0.874793 169 9 0.8958709 125 9 0.9256313 104 8 0.831918 305 9 0.805844 155 9 0.749365 67 6 0.812238 126 9 0.940849 281 9 0.8168169 258 9 0.877901 466 10 0.8574378 167 9 0.883674 134 9 0.739257 110 5 0.9376145 73 4 0.853710 144 9 0.895631 245 10 0.8659363 211 9 0.8814967 194 9 0.8701232 151 9 0.9099881 135 9 0.835497 218 9 0.8663656 0.8333379 0.8133088 0.9288751 0.8983167 0.885637 0.8489604 0.838153 0.8698736 0.8162791 0.8931794 0.752351 0.937752 0.8799487 0.8497102 0.6956038 0.8404914 0.8765799 0.8313322 0.9081619 0.9393125 0.8701495 0.882198 0.9011092 0.9261545 0.920208 0.8842488 0.807578 0.8185169 0.937714 0.8736787 0.903641 0.9099176 0.8947416 0.7853003 0.91156978 0.852807 0.917724 0.8647036 0.9022813 0.9105661 0.9056850 0.9227746 4 0.874224 0.893862 -1.6315e-02 9 0.860298 0.854515 0.00578311 4.5582e-01 7.3888e-02 insignificant 1.000000 1.000000 insignificant 0.3933076 1.0114e-01 insignificant 1 1.000000 insignificant -8.5399e-03 0.72314717 insignificant 1.00000 insignificant 0.874224 0.8808706 -0.0056051 9 0.860298 0.8727109 -1.2413e-02 2.9733e-01 4.3139e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 7.4125e-01 3.5057e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -1.9999e-02 5.5199e-01 insignificant 1.0000e+00 insignificant 0.874224 0.8954895 -0.0290994 9 0.860298 0.871081 -0.01078265 8.4472e-01 6.3509e-02 insignificant 1.0000e+00 0.8410639 insignificant 8.9507e-01 1.3702e-02 weaklyHypometh 1.0000e+00 0.468885 insignificant -0.03138654 1.5370e-01 insignificant 1.0000e+00 insignificant 0.893862 0.8808706 0.01251879 9 0.854515 0.8727109 -0.0181960 1.1778e-01 2.6899e-01 insignificant 5.1657e-01 1.0000e+00 insignificant 4.2261e-01 1.4190e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01145913 7.2782e-01 insignificant 1.0000e+00 insignificant 0.893862 0.8954895 -5.5813e-03 9 0.854515 0.871081 -1.6566e-02 6.3767e-01 2.1150e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.2391e-01 0.06085818 insignificant 1.0000e+00 1.00000 insignificant -0.02284660 2.7894e-01 insignificant 1.000000 insignificant 0.880871 0.8954895 -0.0183325 9 0.8727109 0.871081 0.0016303 5.7089e-01 1.5211e-01 insignificant 1.0000e+00 6.7905e-01 insignificant 6.0231e-01 2.4886e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.01138747 7.1495e-01 insignificant 1.0000e+00 insignificant chr22 41792796 41793796 57362 PACSIN2 ENSG00000100266 0.9000295 190 5 0.8778363 130 5 0.769096 213 5 0.9164225 241 5 0.9330364 73 5 0.897230 266 5 0.895360 87 5 0.935906 156 5 0.703983 201 5 0.914736 261 5 0.8788920 147 5 0.8960784 70 5 0.6805556 235 5 0.8815205 133 5 0.8243411 225 5 0.9527778 48 5 0.7944444 21 2 0.6458871 296 5 0.903763 169 5 0.943355 153 5 0.8553427 53 5 0.739799 109 5 0.938084 157 5 0.8918841 91 5 0.8437620 85 5 0.855951 173 5 0.851469 154 5 0.751760 161 5 0.852209 174 5 0.874022 214 5 0.9252954 166 5 0.937647 191 5 0.1476903 212 5 0.235643 100 5 0.503030 144 2 0.0153846 56 4 0.470057 144 5 0.022150 212 5 0.8750324 205 5 0.8195288 188 5 0.8705439 178 5 0.9030068 186 5 0.807186 212 5 0.8986855 0.8694891 0.7732456 0.9115242 0.9269321 0.895790 0.8829803 0.934281 0.8370862 0.9087300 0.8661132 0.882415 0.805379 0.8788204 0.8255433 0.9446656 0.7370488 0.6528746 0.8958376 0.9380847 0.8495775 0.7464401 0.938348 0.8859226 0.8432786 0.856807 0.8408497 0.909764 0.8532888 0.878814 0.9253158 0.941259 0.1613461 0.2282998 0.3601097 0.01592357 0.581885 0.024066 0.8751404 0.8357412 0.8792404 0.9065460 0.8131579 5 0.855720 0.879051 -2.4479e-02 5 0.882235 0.731451 0.15078348 7.9054e-01 8.2969e-02 insignificant 1.000000 1.000000 insignificant 0.2485561 5.7919e-01 insignificant 1 1.000000 insignificant -2.5061e-03 0.92767951 lowCoverage 1.00000 lowCoverage 0.855160 0.2338710 0.6266710 5 0.715568 0.1776595 5.3791e-01 9.5041e-40 1.0000e+00 hypermethylated 6.7887e-38 1.0000e+00 hypermethylated 6.3796e-12 1.0000e+00 hypermethylated 3.0379e-10 1.0000e+00 hypermethylated 6.2494e-01 6.0027e-04 lowCoverage 1.1360e-02 lowCoverage 0.855676 0.8586171 -0.0012876 5 0.858682 0.852373 0.00630845 2.7282e-01 1.4533e-01 insignificant 1.0000e+00 1.0000000 insignificant 2.1805e-02 2.0628e-01 inconclusive 5.1918e-01 1.000000 insignificant 0.00220301 9.3645e-01 lowCoverage 1.0000e+00 lowCoverage 0.879560 0.2344111 0.65320972 5 0.877742 0.2131914 0.6645502 7.6647e-31 1.0000e+00 hypermethylated 4.5086e-29 1.0000e+00 hypermethylated 3.4830e-11 1.0000e+00 hypermethylated 2.6792e-09 1.0000e+00 hypermethylated 0.62744259 6.2480e-04 lowCoverage 1.2015e-02 lowCoverage 0.879560 0.8586171 2.4670e-02 5 0.877742 0.852373 2.5368e-02 9.2087e-03 4.1422e-01 weaklyHypermeth 1.7100e-01 1.0000e+00 insignificant 2.7993e-02 0.56521652 weaklyHypermeth 6.9982e-01 1.00000 insignificant 0.00470912 8.5759e-01 insignificant 1.000000 insignificant 0.234411 0.8586171 -0.6181491 5 0.2131914 0.852373 -0.6391819 1.0000e+00 5.6435e-15 hypomethylated 1.0000e+00 3.1353e-13 hypomethylated 1.0000e+00 3.0318e-07 hypomethylated 1.0000000 2.1656e-05 hypomethylated -0.62273347 6.5752e-04 lowCoverage 1.6859e-02 lowCoverage chr22 41854496 41855496 57366 BIK ENSG00000100290 1.0000000 5 0 0.5061508 70 6 0.355278 46 4 0.6051722 250 9 0.2648148 67 6 0.633027 300 8 0.558238 235 11 0.659259 47 6 0.376670 118 8 0.287879 19 1 0.5116011 315 13 0.4460842 41 4 0.0833333 23 2 0.3393939 22 1 0.4629630 16 0 0.4000000 11 0 0.2000000 129 2 0.6206157 560 6 0.569923 339 6 0.552792 312 6 0.5397589 91 7 0.547405 182 5 0.516807 152 9 0.3792208 52 3 0.4967199 217 10 0.578042 116 6 0.250000 28 1 0.183333 27 1 0.500000 16 0 0.603561 104 6 0.4134740 71 6 0.616667 30 2 0.6053505 227 13 0.571429 50 6 0.646226 61 1 0.4600966 110 7 0.462547 109 7 0.660244 85 6 0.4983333 40 4 0.5777778 36 2 0.5992063 45 4 0.5672662 320 6 0.646196 213 9 1.0000000 0.0000000 0.4000000 0.3260870 0.2000000 0.470588 0.4054054 0.500000 0.4782609 0.6666667 0.4651163 0.454545 0.000000 0.3333333 0.6666667 NA NA 0.3793103 0.2222222 0.1351351 0.1875000 0.1860465 0.250000 0.2500000 0.3733333 0.428571 0.5000000 0.000000 0.0000000 0.615385 0.3750000 1.000000 0.5348837 0.3333333 NA 0.00000000 0.571429 0.368421 0.4000000 0.2000000 0.4285714 0.4347826 0.2250000 0 0.634899 0.574586 -3.5521e-02 5 0.566630 0.560509 0.00612076 7.1116e-01 3.4711e-01 insignificant 1.000000 1.000000 insignificant 0.6262469 9.9020e-01 insignificant 1 1.000000 insignificant 2.9107e-03 0.96141022 lowCoverage 1.00000 lowCoverage 0.634986 0.5940439 0.0360122 4 0.542383 0.4849079 5.7475e-02 4.9910e-03 3.9386e-01 lowCoverage 2.9533e-02 1.0000e+00 lowCoverage 2.7908e-01 9.0622e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -9.5989e-02 1.0930e-01 lowCoverage 7.2528e-01 lowCoverage 0.634648 0.6998469 -0.0364247 6 0.542554 0.585677 -0.04312291 9.4674e-01 2.1995e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.9636e-01 3.8760e-01 insignificant 1.0000e+00 1.000000 insignificant -0.10609612 4.7500e-02 lowCoverage 7.3077e-01 lowCoverage 0.576602 0.5940439 0.05160161 8 0.582334 0.4849079 0.0974259 1.2393e-01 9.9616e-01 insignificant 5.3883e-01 1.0000e+00 insignificant 6.6314e-01 9.7810e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.09889979 8.4964e-02 lowCoverage 5.7023e-01 lowCoverage 0.573937 0.6998469 9.7326e-03 6 0.549982 0.585677 -3.5695e-02 9.9202e-01 9.1054e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9996e-01 0.81255065 insignificant 1.0000e+00 1.00000 insignificant -0.10900678 3.2871e-02 lowCoverage 0.747075 lowCoverage 0.592187 0.6998469 -0.0561510 5 0.4579686 0.585677 -0.1277082 9.9978e-01 1.4063e-01 insignificant 1.0000e+00 6.3934e-01 insignificant 9.9946e-01 5.9020e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.01010699 8.2088e-01 insignificant 1.0000e+00 insignificant chr22 41890196 41891196 57368 TSPO ENSG00000100300 0.9427083 96 8 0.6231581 112 8 0.744420 53 2 0.8084199 148 8 0.9121261 39 2 0.906163 329 8 0.852273 47 4 0.888562 39 2 0.950000 17 2 0.900000 6 1 0.8943349 111 8 0.8888889 11 1 0.4393939 17 2 0.7857143 9 1 0.9545455 12 1 0.9500000 38 6 NA 0 0 0.8652616 217 8 0.925000 82 6 0.850476 103 8 0.8750000 24 1 1.000000 1 0 0.850000 50 6 0.9583333 86 4 0.8316709 153 8 0.837162 99 7 0.750000 6 0 0.428571 13 1 0.701407 72 6 0.761896 107 8 NA 0 0 1.000000 1 0 0.3433622 137 8 0.387277 170 8 0.027027 128 2 0.3288564 150 7 0.323710 110 8 NA 0 0 0.8492751 139 8 0.9004960 109 8 0.8069666 256 8 0.6856600 104 5 0.812484 269 8 0.8750000 0.6346154 0.8095238 0.8780488 0.7692308 0.906475 0.8181818 0.764706 0.9000000 0.8000000 0.9705882 0.666667 0.545455 0.5714286 0.9090909 0.7000000 NA 0.7594937 0.8333333 0.7800000 1.0000000 NA 0.800000 0.9523810 0.6333333 0.705882 0.5000000 0.714286 0.6969697 0.609756 NA NA 0.0888889 0.0781250 0.0000000 0.26086957 0.170732 NA 0.7924528 0.8095238 0.6804124 0.6153846 0.6593407 0 0.853199 0.788525 6.4296e-02 2 0.867108 0.812552 0.05455626 4.7742e-02 9.9294e-01 lowCoverage 1.000000 1.000000 lowCoverage 0.5866462 8.6992e-01 lowCoverage 1 1.000000 lowCoverage 2.8752e-02 0.62121745 lowCoverage 1.00000 lowCoverage 0.853199 0.2222222 0.5983344 6 0.867108 0.3278972 5.3921e-01 1.7201e-38 9.9999e-01 hypermethylated 1.0750e-36 1.0000e+00 hypermethylated 1.6525e-12 1.0000e+00 hypermethylated 9.3002e-11 1.0000e+00 hypermethylated 5.6435e-01 2.5770e-04 lowCoverage 5.2773e-03 lowCoverage 0.853297 0.7831050 0.0616181 6 0.881874 0.844943 0.03693064 7.9883e-02 9.2480e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.7661e-02 9.8470e-01 insignificant 1.0000e+00 1.000000 insignificant 0.03541554 4.5982e-01 lowCoverage 1.0000e+00 lowCoverage 0.788525 0.2222222 0.54959358 2 0.812552 0.3278972 0.4846547 2.2732e-17 1.0000e+00 lowCoverage 6.1439e-16 1.0000e+00 lowCoverage 6.5305e-09 1.0000e+00 lowCoverage 2.4187e-07 1.0000e+00 lowCoverage 0.53559335 1.1350e-04 lowCoverage 2.9869e-03 lowCoverage 0.788871 0.7831050 1.8285e-04 2 0.833379 0.844943 -1.1564e-02 8.3009e-01 6.8827e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 5.7525e-01 0.90436167 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.00666367 9.1386e-01 lowCoverage 1.000000 lowCoverage 0.222222 0.7828571 -0.5621570 8 0.3278972 0.825561 -0.4976640 1.0000e+00 1.2917e-20 hypomethylated 1.0000e+00 1.1743e-18 hypomethylated 1.0000e+00 7.9352e-07 hypomethylated 1.0000000 4.4085e-05 hypomethylated -0.52892967 3.2018e-04 hypomethylated 1.0072e-02 hypomethylated chr22 41989596 41990596 57372 TTLL12 ENSG00000100304 0.8542927 475 8 0.6696600 314 7 0.729464 93 8 0.9531786 383 5 0.9166667 55 4 0.956514 360 8 0.894474 87 8 0.878002 106 8 0.829545 39 3 0.917815 53 3 0.8822518 223 8 0.5515625 51 3 0.6966309 114 3 0.9047619 16 0 0.8649335 57 3 0.6398810 33 3 0.6785714 20 3 0.4378453 596 8 0.884710 281 7 0.945733 334 8 0.9332251 60 8 0.769048 53 5 0.890909 118 8 0.9711023 80 8 0.8788341 181 5 0.817909 212 8 0.762987 51 3 0.891667 30 3 0.816036 232 8 0.831433 172 8 0.8795886 191 8 0.945005 299 8 0.2360281 259 8 0.201827 174 8 0.180373 288 7 0.5764439 289 7 0.158587 212 7 0.483787 325 8 0.7465474 286 8 0.3947331 264 8 0.8167616 490 5 0.4707766 450 8 0.384877 290 8 0.8134020 0.8167038 0.6960832 0.9410469 0.9074074 0.906098 0.8917112 0.847960 0.8538733 0.8773850 0.8730913 0.529514 0.785157 0.8172722 0.8132781 0.6805367 0.7557754 0.4981576 0.8851093 0.9407010 0.9403559 0.7290246 0.853872 0.9570463 0.8581273 0.806179 0.7601311 0.927160 0.7728574 0.854699 0.8315066 0.930067 0.2435535 0.3154981 0.1525370 0.52849003 0.251268 0.449370 0.7705548 0.3945830 0.7632253 0.3720888 0.4094878 1 0.791588 0.862336 -6.8265e-02 8 0.834912 0.911378 -0.07646555 9.9879e-01 6.8242e-02 insignificant 1.000000 1.000000 insignificant 0.9781184 4.0520e-01 insignificant 1 1.000000 insignificant -6.1321e-02 0.11882016 insignificant 1.00000 insignificant 0.791248 0.2792502 0.5071877 8 0.785386 0.3800281 4.0536e-01 1.9997e-30 1.0000e+00 hypermethylated 7.9988e-29 1.0000e+00 hypermethylated 2.3992e-14 1.0000e+00 hypermethylated 2.9989e-12 1.0000e+00 hypermethylated 4.9815e-01 3.8167e-04 hypermethylated 7.4838e-03 hypermethylated 0.791248 0.5859551 0.2180668 8 0.785386 0.587990 0.19739567 3.5348e-09 9.9997e-01 hypermethylated 3.5348e-07 1.0000000 hypermethylated 6.6638e-07 1.0000e+00 hypermethylated 9.5198e-05 1.000000 hypermethylated 0.24158543 5.4323e-02 insignificant 7.6511e-01 insignificant 0.862007 0.2792502 0.57192329 8 0.884791 0.3800281 0.5047629 6.6203e-36 1.0000e+00 hypermethylated 6.0185e-34 1.0000e+00 hypermethylated 4.4990e-14 1.0000e+00 hypermethylated 8.7940e-12 1.0000e+00 hypermethylated 0.55947093 3.7567e-04 hypermethylated 7.6668e-03 hypermethylated 0.862007 0.5859551 2.9672e-01 8 0.884791 0.587990 2.9680e-01 1.1626e-16 1.0000e+00 hypermethylated 3.8755e-14 1.0000e+00 hypermethylated 2.5555e-08 1.00000000 hypermethylated 9.0450e-06 1.00000 hypermethylated 0.30290607 2.7744e-02 weaklyHypermeth 0.706778 insignificant 0.279250 0.5859551 -0.3023639 8 0.3800281 0.587990 -0.2079620 9.9918e-01 1.7322e-06 hypomethylated 1.0000e+00 2.6649e-05 hypomethylated 9.9993e-01 9.9213e-04 hypomethylated 1.0000000 1.5264e-02 hypomethylated -0.25656486 5.8676e-02 insignificant 4.1321e-01 insignificant chr22 42712282 42713282 57380 ENSG00000218600 0.8960550 328 5 0.8085642 182 5 0.912129 95 5 0.8974079 215 5 0.9189542 61 5 0.879177 258 5 0.887179 97 5 0.947408 140 5 0.797186 83 5 0.911888 84 5 0.9379247 196 5 0.8703992 77 5 0.9239587 135 5 NA 0 0 0.9020968 107 5 0.8690058 85 5 0.8722222 78 5 0.9349290 241 5 0.972381 92 5 0.907529 252 5 0.7428571 34 5 0.861555 76 5 0.922441 193 5 0.9428571 35 5 0.9888889 72 5 0.906026 222 5 0.930333 93 5 0.979167 50 5 0.874832 182 5 0.919998 233 5 0.8689079 213 5 0.904701 273 5 0.8786452 172 5 0.653926 131 5 0.949513 275 5 0.9458333 66 5 0.813828 71 5 0.951307 191 5 0.9075963 292 5 0.9363036 361 5 0.9328914 297 5 0.9580689 307 5 0.933048 338 5 0.8977240 0.8108613 0.9100644 0.8977349 0.9162234 0.883898 0.8855393 0.949526 0.8037620 0.9136774 0.9385919 0.869579 0.924241 NA 0.9047288 0.8656533 0.8716824 0.9342720 0.9734529 0.8920388 0.7533256 0.8608640 0.921960 0.9410064 0.9894287 0.908606 0.9319366 0.976215 0.8751737 0.920183 0.8703714 0.907105 0.8811207 0.6575259 0.9514683 0.94770580 0.816308 0.951080 0.9075378 0.9344553 0.9323125 0.9568371 0.9345904 5 0.900927 0.908115 -5.4099e-03 5 0.914745 0.919863 -0.00511831 9.4566e-01 6.8296e-01 insignificant 1.000000 1.000000 insignificant 0.9923948 3.1370e-01 insignificant 1 1.000000 insignificant -6.3682e-03 0.76571503 lowCoverage 1.00000 lowCoverage 0.900891 0.8796909 0.0204741 5 0.897694 0.8727547 2.4939e-02 7.9723e-02 1.3563e-01 insignificant 3.7603e-01 1.0000e+00 insignificant 3.5069e-01 9.4170e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 3.1670e-02 5.4270e-01 lowCoverage 1.0000e+00 lowCoverage 0.900891 0.9347962 -0.0340490 5 0.897694 0.934703 -0.03700969 9.8756e-01 7.5846e-03 weaklyHypometh 1.0000e+00 0.2841775 insignificant 9.8975e-01 1.6294e-02 weaklyHypometh 1.0000e+00 0.509183 insignificant -0.03640289 1.0915e-02 lowCoverage 3.2451e-01 lowCoverage 0.908060 0.8796909 0.02326486 5 0.903835 0.8727547 0.0310808 2.3917e-01 1.4290e-01 insignificant 9.8220e-01 1.0000e+00 insignificant 3.2702e-01 3.8803e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.03803821 4.8377e-01 insignificant 1.0000e+00 insignificant 0.908060 0.9347962 -2.7465e-02 5 0.903835 0.934703 -3.0868e-02 9.5495e-01 3.2442e-02 weaklyHypometh 1.0000e+00 8.3777e-01 insignificant 7.9698e-01 0.21893742 insignificant 1.0000e+00 1.00000 insignificant -0.03003468 1.5944e-01 insignificant 1.000000 insignificant 0.879691 0.9347962 -0.0556756 5 0.8727547 0.934703 -0.0619485 8.5650e-01 1.3987e-01 insignificant 1.0000e+00 6.3934e-01 insignificant 7.0405e-01 1.7110e-01 insignificant 1.0000000 8.5981e-01 insignificant -0.06807289 2.1599e-01 insignificant 1.0000e+00 insignificant chr22 42767382 42768382 57384 PARVB ENSG00000188677 0.8250063 308 10 0.7416361 213 12 0.699919 168 12 0.8241197 193 11 0.7636213 102 10 0.807659 344 10 0.747771 134 9 0.820272 187 10 0.626081 114 9 0.665691 111 6 0.7748373 318 10 0.6639610 66 7 0.8234535 162 10 0.8194805 42 4 0.8464052 140 10 0.6390598 66 5 0.6519802 88 5 0.8105525 198 10 0.764790 181 10 0.761333 315 12 0.8207431 48 4 0.726542 90 9 0.758164 165 11 0.8480511 81 8 0.8661905 52 5 0.779277 260 12 0.739583 84 6 0.721605 44 3 0.619385 121 10 0.733052 247 12 0.7755003 260 11 0.830508 482 11 0.7981542 229 12 0.634750 133 10 0.768009 240 11 0.6533645 73 5 0.594610 70 5 0.755493 256 12 0.7279702 220 10 0.8682933 324 10 0.7448231 202 10 0.7999188 219 10 0.881856 236 10 0.8096631 0.7417480 0.6969652 0.8529894 0.7878795 0.813197 0.7744421 0.804206 0.6821003 0.7335420 0.7770055 0.723999 0.847171 0.8093057 0.8692366 0.6864374 0.7197561 0.8142403 0.7924402 0.8104915 0.8898037 0.7666643 0.822949 0.8028415 0.8701534 0.780427 0.8012552 0.745099 0.6857434 0.733469 0.8192395 0.850763 0.7958800 0.6522274 0.7645155 0.71562568 0.631143 0.760427 0.7745691 0.8655001 0.8170577 0.8428638 0.8808113 3 0.788116 0.803109 -1.3560e-02 10 0.770922 0.828215 -0.05729296 9.7954e-01 3.9003e-01 insignificant 1.000000 1.000000 insignificant 0.9692429 4.3074e-01 insignificant 1 1.000000 insignificant -1.4335e-02 0.57724092 insignificant 1.00000 insignificant 0.788081 0.7742258 0.0403041 10 0.788298 0.7590557 2.9242e-02 1.4194e-02 8.8752e-01 weaklyHypermeth 7.6310e-02 1.0000e+00 weaklyHypermeth 2.5730e-02 9.7152e-01 weaklyHypermeth 1.7868e-01 1.0000e+00 insignificant 5.3151e-02 1.9919e-01 insignificant 1.0000e+00 insignificant 0.788116 0.8301415 -0.0521185 10 0.770922 0.786157 -0.01523455 9.9926e-01 6.1525e-03 weaklyHypometh 1.0000e+00 0.2796601 insignificant 9.8627e-01 1.8327e-02 weaklyHypometh 1.0000e+00 0.534406 insignificant -0.05069074 1.9652e-01 insignificant 1.0000e+00 insignificant 0.802597 0.7742258 0.05246530 10 0.799584 0.7590557 0.0405285 2.3804e-03 9.5547e-01 weaklyHypermeth 1.4971e-02 1.0000e+00 weaklyHypermeth 7.2779e-03 9.7250e-01 weaklyHypermeth 6.0649e-02 1.0000e+00 weaklyHypermeth 0.06748677 1.2271e-01 insignificant 7.4824e-01 insignificant 0.803109 0.8301415 -4.0153e-02 10 0.828215 0.786157 4.2058e-02 9.9969e-01 7.1690e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9471e-01 0.14008256 insignificant 1.0000e+00 1.00000 insignificant -0.03635531 3.5561e-01 insignificant 1.000000 insignificant 0.774226 0.8306922 -0.0976356 10 0.7590557 0.833849 -0.0747937 9.9969e-01 9.6090e-05 weaklyHypometh 1.0000e+00 1.1577e-03 weaklyHypometh 9.9998e-01 6.1462e-05 weaklyHypometh 1.0000000 1.7073e-03 weaklyHypometh -0.10384207 5.1332e-02 insignificant 3.8888e-01 insignificant chr22 43125977 43126977 57395 KIAA1644 ENSG00000138944 0.8429598 375 9 0.8413805 228 9 0.726801 130 9 0.8063245 511 11 0.7375000 43 5 0.696936 296 9 0.853030 69 5 0.677748 285 9 0.605473 99 6 0.753280 91 5 0.8390790 255 9 0.7112299 34 1 0.6849233 270 9 0.8750000 8 1 0.6428180 103 9 0.6000000 21 1 0.6775826 78 5 0.7402460 609 11 0.844853 220 9 0.761610 406 9 0.6852417 131 9 0.776393 162 9 0.824653 306 9 0.6725253 156 9 0.8627423 168 9 0.940502 305 9 0.733237 184 9 0.738480 81 5 0.778889 242 9 0.777656 359 10 0.8549443 305 9 0.786366 467 10 0.5934939 199 9 0.712565 270 9 0.717097 190 9 0.8780166 79 5 0.636599 139 9 0.693981 380 9 0.8454823 221 9 0.9643397 405 9 0.8655048 248 9 0.7246180 281 9 0.864137 461 9 0.8072329 0.8362079 0.7222624 0.8385950 0.7127688 0.869418 0.7865591 0.770213 0.6984824 0.7738384 0.8832482 0.510436 0.825278 NA 0.6713126 0.7006794 0.6724890 0.7974451 0.8525181 0.8088835 0.7589531 0.7758282 0.783412 0.7970520 0.9190550 0.924007 0.7191653 0.726083 0.8685683 0.800378 0.8375417 0.821132 0.6217819 0.6338919 0.6909622 0.80359163 0.626166 0.824052 0.8179006 0.9636591 0.8848573 0.8191946 0.7954728 5 0.802711 0.822052 -2.3193e-02 9 0.740301 0.766439 -0.02613852 9.6177e-01 2.1647e-02 weaklyHypometh 1.000000 0.746435 insignificant 0.9667620 5.7148e-02 insignificant 1 1.000000 insignificant -4.0030e-02 0.18171442 insignificant 1.00000 insignificant 0.802711 0.7271281 0.0929591 9 0.740301 0.6345609 1.0574e-01 5.3320e-07 7.7899e-01 weaklyHypermeth 5.3859e-06 1.0000e+00 weaklyHypermeth 1.1196e-02 9.2867e-01 weaklyHypermeth 8.8161e-02 1.0000e+00 weaklyHypermeth 4.0647e-02 3.8518e-01 insignificant 1.0000e+00 insignificant 0.803394 0.8743812 -0.0558312 9 0.777298 0.819388 -0.04209029 9.9976e-01 4.7858e-03 weaklyHypometh 1.0000e+00 0.2658801 insignificant 9.9987e-01 9.7779e-03 weaklyHypometh 1.0000e+00 0.391117 insignificant -0.10687756 4.5375e-02 weaklyHypometh 7.1115e-01 insignificant 0.822052 0.7271281 0.11465332 9 0.766439 0.6345609 0.1318785 1.4650e-06 9.5193e-01 weaklyHypermeth 1.6460e-05 1.0000e+00 weaklyHypermeth 7.7769e-04 9.2115e-01 weaklyHypermeth 9.8442e-03 1.0000e+00 weaklyHypermeth 0.08067717 1.1289e-01 insignificant 7.1451e-01 insignificant 0.823241 0.8743812 -3.1389e-02 9 0.795712 0.819388 -2.3677e-02 9.7583e-01 1.2515e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8035e-01 0.16149951 insignificant 1.0000e+00 1.00000 insignificant -0.06684718 1.7465e-01 insignificant 1.000000 insignificant 0.727490 0.8743812 -0.1471738 9 0.6467937 0.819388 -0.1725946 9.9824e-01 2.7058e-04 weaklyHypometh 1.0000e+00 2.8785e-03 weaklyHypometh 9.9965e-01 3.0055e-03 weaklyHypometh 1.0000000 3.6211e-02 weaklyHypometh -0.14752435 2.5497e-02 weaklyHypometh 2.4800e-01 insignificant chr22 43223277 43224277 57397 ENSG00000216669 0.8676068 330 11 0.6000000 7 1 0.916433 182 10 0.9444538 234 6 0.8373930 92 10 0.888841 438 11 0.860506 258 10 0.939610 121 10 0.500000 18 1 0.873613 266 10 0.9211928 311 11 0.9132691 104 10 0.8512405 393 11 0.8125000 28 0 0.9058245 178 10 0.0000000 4 0 0.8619310 262 11 0.7779967 239 9 0.925475 93 5 0.904585 187 10 0.6079932 35 4 0.801102 94 11 0.819161 44 5 0.8601732 124 10 0.7775253 165 8 0.912593 259 10 0.907737 129 11 0.936364 97 10 0.897877 172 10 0.933382 275 10 0.8947191 219 11 0.928670 432 11 0.1383696 113 5 0.551816 144 11 0.179487 117 6 0.4253788 42 4 0.671282 204 11 0.211806 373 11 0.9194491 345 11 0.7500000 8 1 0.8846889 210 8 0.2222222 5 0 0.877175 278 8 0.7819425 NA 0.7560160 0.9436369 0.7045455 0.768827 0.9207267 0.844372 0.3181818 0.6220979 0.9511478 0.968434 0.690519 0.7024862 0.9553916 0.3399666 0.7482097 0.7063673 0.9428571 0.8197360 0.6293290 0.8075758 0.702599 0.7064935 0.4522727 0.956083 0.6988893 0.943939 0.7107304 0.959573 0.8217904 0.934269 0.3024681 0.5685606 0.4452382 0.48227018 0.705412 0.404321 0.8885715 NA 0.7368234 0.7316788 0.6178050 0 0.899332 0.898289 -8.2920e-03 10 0.869880 0.879808 -0.00992796 8.2701e-01 4.6390e-01 insignificant 1.000000 1.000000 insignificant 0.5417737 5.6542e-01 insignificant 1 1.000000 insignificant -5.1318e-02 0.36964268 insignificant 1.00000 insignificant 0.899332 0.3413897 0.5484305 10 0.869880 0.3548871 5.1499e-01 4.9317e-52 1.0000e+00 hypermethylated 4.9317e-50 1.0000e+00 hypermethylated 2.0252e-13 1.0000e+00 hypermethylated 1.8411e-11 1.0000e+00 hypermethylated 4.4210e-01 2.3623e-03 weaklyHypermeth 3.1083e-02 weaklyHypermeth 0.899332 0.9267139 -0.0253906 8 0.869880 0.897614 -0.02773352 9.7564e-01 3.3186e-01 insignificant 1.0000e+00 1.0000000 insignificant 7.2927e-01 6.9626e-01 insignificant 1.0000e+00 1.000000 insignificant 0.07441644 6.1524e-01 insignificant 1.0000e+00 insignificant 0.898289 0.3413897 0.54928464 11 0.879808 0.3548871 0.5249212 4.3130e-37 1.0000e+00 hypermethylated 4.3130e-35 1.0000e+00 hypermethylated 1.3558e-11 1.0000e+00 hypermethylated 1.1298e-09 1.0000e+00 hypermethylated 0.49341805 1.9520e-03 weaklyHypermeth 2.7111e-02 weaklyHypermeth 0.898289 0.9267139 -2.4130e-02 9 0.879808 0.897614 -1.7806e-02 9.2872e-01 4.2222e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.8965e-01 0.60361341 insignificant 1.0000e+00 1.00000 insignificant 0.12573423 3.9445e-01 insignificant 1.000000 insignificant 0.341390 0.9267139 -0.5542290 9 0.3548871 0.897614 -0.5427268 1.0000e+00 2.4402e-12 hypomethylated 1.0000e+00 9.3853e-11 hypomethylated 1.0000e+00 3.6356e-05 hypomethylated 1.0000000 1.0693e-03 hypomethylated -0.36768382 5.1320e-02 insignificant 3.8888e-01 insignificant chr22 43223477 43224477 57398 ENSG00000216669 0.8676068 330 11 0.6000000 7 1 0.916433 182 10 0.9444538 234 6 0.8373930 92 10 0.888841 438 11 0.860506 258 10 0.939610 121 10 0.500000 18 1 0.873613 266 10 0.9211928 311 11 0.9132691 104 10 0.8512405 393 11 0.8125000 28 0 0.9058245 178 10 0.0000000 4 0 0.8619310 262 11 0.7779967 239 9 0.925475 93 5 0.904585 187 10 0.6079932 35 4 0.801102 94 11 0.819161 44 5 0.8601732 124 10 0.7775253 165 8 0.912593 259 10 0.907737 129 11 0.936364 97 10 0.897877 172 10 0.933382 275 10 0.8947191 219 11 0.928670 432 11 0.1383696 113 5 0.551816 144 11 0.179487 117 6 0.4253788 42 4 0.671282 204 11 0.211806 373 11 0.9194491 345 11 0.7500000 8 1 0.8846889 210 8 0.2222222 5 0 0.877175 278 8 0.7819425 NA 0.7560160 0.9436369 0.7045455 0.768827 0.9207267 0.844372 0.3181818 0.6220979 0.9511478 0.968434 0.690519 0.7024862 0.9553916 0.3399666 0.7482097 0.7063673 0.9428571 0.8197360 0.6293290 0.8075758 0.702599 0.7064935 0.4522727 0.956083 0.6988893 0.943939 0.7107304 0.959573 0.8217904 0.934269 0.3024681 0.5685606 0.4452382 0.48227018 0.705412 0.404321 0.8885715 NA 0.7368234 0.7316788 0.6178050 0 0.899332 0.898289 -8.2920e-03 10 0.869880 0.879808 -0.00992796 8.2701e-01 4.6390e-01 insignificant 1.000000 1.000000 insignificant 0.5417737 5.6542e-01 insignificant 1 1.000000 insignificant -5.1318e-02 0.36964268 insignificant 1.00000 insignificant 0.899332 0.3413897 0.5484305 10 0.869880 0.3548871 5.1499e-01 4.9317e-52 1.0000e+00 hypermethylated 4.9317e-50 1.0000e+00 hypermethylated 2.0252e-13 1.0000e+00 hypermethylated 1.8411e-11 1.0000e+00 hypermethylated 4.4210e-01 2.3623e-03 weaklyHypermeth 3.1083e-02 weaklyHypermeth 0.899332 0.9267139 -0.0253906 8 0.869880 0.897614 -0.02773352 9.7564e-01 3.3186e-01 insignificant 1.0000e+00 1.0000000 insignificant 7.2927e-01 6.9626e-01 insignificant 1.0000e+00 1.000000 insignificant 0.07441644 6.1524e-01 insignificant 1.0000e+00 insignificant 0.898289 0.3413897 0.54928464 11 0.879808 0.3548871 0.5249212 4.3130e-37 1.0000e+00 hypermethylated 4.3130e-35 1.0000e+00 hypermethylated 1.3558e-11 1.0000e+00 hypermethylated 1.1298e-09 1.0000e+00 hypermethylated 0.49341805 1.9520e-03 weaklyHypermeth 2.7111e-02 weaklyHypermeth 0.898289 0.9267139 -2.4130e-02 9 0.879808 0.897614 -1.7806e-02 9.2872e-01 4.2222e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.8965e-01 0.60361341 insignificant 1.0000e+00 1.00000 insignificant 0.12573423 3.9445e-01 insignificant 1.000000 insignificant 0.341390 0.9267139 -0.5542290 9 0.3548871 0.897614 -0.5427268 1.0000e+00 2.4402e-12 hypomethylated 1.0000e+00 9.3853e-11 hypomethylated 1.0000e+00 3.6356e-05 hypomethylated 1.0000000 1.0693e-03 hypomethylated -0.36768382 5.1320e-02 insignificant 3.8888e-01 insignificant chr22 43462077 43463077 57401 PRR5-ARHGAP8 ENSG00000186654 0.7144855 180 10 0.5412148 220 10 0.750703 107 10 0.7129348 162 10 0.6607353 66 7 0.701470 223 10 0.668344 91 10 0.771746 171 10 0.678373 85 10 0.783810 59 7 0.7139979 288 10 0.5550000 29 2 0.7149603 116 10 0.7868717 78 9 0.7728480 94 10 0.6400000 28 1 0.6428571 10 0 0.7061099 210 8 0.764582 135 7 0.760303 130 10 0.5636364 43 4 0.569444 34 2 0.666809 115 9 0.7647526 82 10 0.7225108 82 3 0.715067 174 9 0.715801 77 9 0.934343 24 1 0.753385 117 7 0.738245 182 10 0.5763317 147 10 0.725921 215 9 0.6715728 170 10 0.695227 91 8 0.697019 136 10 0.5370370 17 0 0.668638 103 10 0.701616 169 10 0.6814445 166 10 0.7676836 147 10 0.8037135 189 9 0.6459451 96 5 0.760348 111 10 0.7033234 0.6072582 0.7123675 0.6967032 0.6668725 0.707992 0.6299755 0.689189 0.6906579 0.8057070 0.7107481 0.551527 0.691779 0.7832031 0.7576301 0.5984733 0.6300580 0.7254502 0.7439660 0.7552295 0.6506361 0.5759032 0.681565 0.7703758 0.7181521 0.689640 0.6668302 0.934287 0.7108431 0.748451 0.6470284 0.721576 0.6605224 0.6825844 0.7363278 0.61000999 0.633429 0.683018 0.7250246 0.8035715 0.7744632 0.7026127 0.7711322 0 0.703062 0.723684 -9.8234e-03 10 0.689097 0.711217 -0.02211999 6.8708e-01 6.9494e-01 insignificant 1.000000 1.000000 insignificant 0.7382852 4.3215e-01 insignificant 1 1.000000 insignificant -1.7866e-03 0.95820442 insignificant 1.00000 insignificant 0.703599 0.6749271 0.0355616 10 0.731578 0.6974506 3.4127e-02 1.1390e-01 9.9784e-01 insignificant 5.1305e-01 1.0000e+00 insignificant 3.0089e-01 9.6751e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.0216e-02 2.1220e-01 insignificant 1.0000e+00 insignificant 0.701861 0.7376587 -0.0552005 9 0.665181 0.669287 -0.00410542 9.9977e-01 9.6136e-03 weaklyHypometh 1.0000e+00 0.3101146 insignificant 9.9956e-01 3.6341e-02 weaklyHypometh 1.0000e+00 0.757100 insignificant -0.02975965 4.0208e-01 insignificant 1.0000e+00 insignificant 0.725643 0.6749271 0.04503283 10 0.735488 0.6974506 0.0380377 1.5264e-02 9.8897e-01 weaklyHypermeth 8.2063e-02 1.0000e+00 weaklyHypermeth 7.3579e-02 9.8704e-01 insignificant 4.2287e-01 1.0000e+00 insignificant 0.04200216 3.0142e-01 insignificant 1.0000e+00 insignificant 0.723041 0.7376587 -4.8551e-02 9 0.689003 0.669287 1.9716e-02 9.9977e-01 3.2332e-02 weaklyHypometh 1.0000e+00 8.3777e-01 insignificant 9.8929e-01 0.10987065 insignificant 1.0000e+00 1.00000 insignificant -0.02797303 5.1586e-01 insignificant 1.000000 insignificant 0.674453 0.7404255 -0.0918128 9 0.6671957 0.770073 -0.1028772 9.9999e-01 2.2095e-05 weaklyHypometh 1.0000e+00 3.0242e-04 weaklyHypometh 9.9984e-01 2.8153e-03 weaklyHypometh 1.0000000 3.5245e-02 weaklyHypometh -0.06997519 1.0771e-01 insignificant 6.2260e-01 insignificant chr22 43467177 43468177 57402 PRR5-ARHGAP8 ENSG00000186654 0.8632696 322 6 0.7779035 206 6 0.868371 161 6 0.9075416 270 6 0.8777948 73 6 0.908356 318 6 0.817255 181 6 0.923635 125 6 0.821220 133 6 0.892919 108 6 0.9040063 188 6 0.7867867 129 6 0.9132451 159 6 0.7500000 20 1 0.8768567 159 6 0.8330660 115 6 0.8286700 112 6 0.8621546 262 6 0.888267 127 6 0.831731 204 6 0.7202550 114 6 0.813816 144 6 0.908412 240 6 0.8256385 90 6 0.7519231 68 6 0.938519 186 6 0.895163 135 6 0.850150 120 6 0.806654 97 6 0.885802 165 6 0.9166448 154 6 0.916992 314 6 0.8742441 112 6 0.915446 129 6 0.000000 1 0 0.9093336 128 6 0.891940 124 6 0.586256 190 6 0.8883576 271 6 0.8883733 404 6 0.8427647 244 6 0.8684816 336 6 0.845730 354 6 0.8502109 0.7552274 0.8383091 0.9018799 0.8765085 0.893548 0.8231425 0.899368 0.8013326 0.8643685 0.9034538 0.809883 0.888575 NA 0.8486457 0.8443039 0.8092086 0.8590952 0.8787227 0.8455957 0.7405675 0.7639037 0.897002 0.7857596 0.7770482 0.923539 0.8818238 0.804688 0.8408261 0.877756 0.9021106 0.923269 0.8038180 0.8953533 NA 0.86729718 0.853030 0.607637 0.8651019 0.8810881 0.8299645 0.8501553 0.8203556 6 0.856762 0.863164 -8.6805e-03 6 0.865615 0.872148 -0.00653264 7.6687e-01 4.9691e-01 insignificant 1.000000 1.000000 insignificant 0.6052973 4.6302e-01 insignificant 1 1.000000 insignificant 4.1551e-03 0.85844252 insignificant 1.00000 insignificant 0.856762 0.7733918 0.0788396 6 0.865615 0.8077161 5.7899e-02 2.9368e-03 6.7388e-01 weaklyHypermeth 1.7907e-02 1.0000e+00 weaklyHypermeth 2.6668e-01 3.1232e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.6045e-01 3.2954e-01 insignificant 1.0000e+00 insignificant 0.856762 0.8657551 0.0011253 6 0.865615 0.867594 -0.00197906 5.1473e-01 5.7803e-01 insignificant 1.0000e+00 1.0000000 insignificant 4.3372e-01 7.2400e-01 insignificant 1.0000e+00 1.000000 insignificant -0.01008891 5.0501e-01 insignificant 1.0000e+00 insignificant 0.863164 0.7733918 0.08813189 6 0.872148 0.8077161 0.0644318 2.9495e-02 6.7168e-01 weaklyHypermeth 1.4859e-01 1.0000e+00 insignificant 4.1969e-01 2.2964e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.15629401 3.4273e-01 insignificant 1.0000e+00 insignificant 0.863164 0.8657551 1.0534e-02 6 0.872148 0.867594 4.5536e-03 6.3442e-01 7.9396e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.6918e-01 0.85068253 insignificant 1.0000e+00 1.00000 insignificant -0.01424397 5.3568e-01 insignificant 1.000000 insignificant 0.773392 0.8657551 -0.0765833 6 0.8077161 0.867594 -0.0598783 3.8465e-01 1.2184e-01 insignificant 1.0000e+00 5.6146e-01 insignificant 3.0283e-01 6.3043e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.17053797 3.0287e-01 insignificant 1.0000e+00 insignificant chr22 44068377 44069377 57416 UPK3A ENSG00000100373 0.8376356 299 6 0.8668467 449 6 0.772626 227 6 0.9322875 203 6 0.9381227 190 6 0.880396 455 6 0.861794 246 6 0.888525 202 6 0.867981 232 6 0.891120 149 6 0.8140496 299 6 0.8778180 149 6 0.9095832 178 6 0.9163878 84 3 0.8656513 243 6 0.7834499 158 6 0.9225000 98 4 0.8143250 246 6 0.873802 278 6 0.915084 345 6 0.8540741 127 6 0.889015 91 6 0.881539 244 6 0.8270198 161 6 0.9375000 45 4 0.934653 402 6 0.845078 140 6 0.975718 138 6 0.873654 278 6 0.873334 460 6 0.9133449 394 6 0.930674 402 6 0.3081033 300 6 0.122286 113 6 0.362411 325 6 0.3727273 85 4 0.355394 378 6 0.554879 377 6 0.9136026 275 6 0.8689926 321 6 0.8982984 206 6 0.8864345 250 6 0.845137 242 6 0.8413349 0.8610892 0.7710774 0.9351024 0.9339269 0.876888 0.8612011 0.883910 0.8656656 0.8894862 0.8147755 0.867686 0.897934 0.9095579 0.8630096 0.7711957 0.9104604 0.8199495 0.8664898 0.9150433 0.8505535 0.8973918 0.878744 0.8261100 0.9216102 0.936429 0.8369378 0.974645 0.8650746 0.880302 0.9125727 0.934618 0.3206199 0.1235156 0.3491435 0.32015922 0.347132 0.597190 0.9158775 0.8574562 0.9009141 0.8765453 0.8433594 6 0.865116 0.905968 -4.0170e-02 6 0.866407 0.901199 -0.03479224 9.9948e-01 3.4715e-03 weaklyHypometh 1.000000 0.320928 insignificant 0.9983093 3.7512e-02 weaklyHypometh 1 1.000000 insignificant -2.3134e-02 0.17449645 insignificant 1.00000 insignificant 0.865116 0.3688213 0.4661568 6 0.866407 0.4017610 4.6465e-01 6.2742e-38 1.0000e+00 hypermethylated 3.6907e-36 1.0000e+00 hypermethylated 7.2143e-12 1.0000e+00 hypermethylated 3.1366e-10 1.0000e+00 hypermethylated 5.2553e-01 1.8435e-04 hypermethylated 4.0402e-03 hypermethylated 0.865116 0.8856260 -0.0146872 6 0.866407 0.884833 -0.01842654 9.4402e-01 2.4837e-01 insignificant 1.0000e+00 1.0000000 insignificant 7.3097e-01 5.9941e-01 insignificant 1.0000e+00 1.000000 insignificant -0.01099365 5.0243e-01 insignificant 1.0000e+00 insignificant 0.905968 0.3688213 0.50912099 6 0.901199 0.4017610 0.4994381 1.0261e-28 1.0000e+00 hypermethylated 5.7004e-27 1.0000e+00 hypermethylated 9.2166e-11 1.0000e+00 hypermethylated 5.1204e-09 1.0000e+00 hypermethylated 0.54866684 1.3026e-04 hypermethylated 3.3399e-03 hypermethylated 0.905968 0.8856260 2.3985e-02 6 0.901199 0.884833 1.6366e-02 9.1943e-02 8.6176e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.5967e-01 0.94046511 insignificant 1.0000e+00 1.00000 insignificant 0.01214080 4.9821e-01 insignificant 1.000000 insignificant 0.368821 0.8856260 -0.4609100 6 0.4017610 0.884833 -0.4830724 1.0000e+00 3.4612e-15 hypomethylated 1.0000e+00 2.0360e-13 hypomethylated 1.0000e+00 5.1133e-07 hypomethylated 1.0000000 3.4088e-05 hypomethylated -0.53652603 1.5582e-04 hypomethylated 6.4923e-03 hypomethylated chr22 44318577 44319577 57426 FBLN1 ENSG00000077942 0.7770558 233 10 0.6863908 182 7 0.713156 107 7 0.7898978 180 10 0.8058333 66 6 0.702871 261 10 0.708333 66 5 0.791583 147 7 0.792222 83 7 0.675325 78 7 0.7711175 237 10 0.7250000 29 0 0.8183349 176 10 0.6904762 57 7 0.7854487 101 10 0.2611111 23 1 0.4166667 7 0 0.7693165 249 10 0.804978 95 10 0.701061 200 10 0.7588384 68 7 0.798068 75 4 0.821512 116 7 0.7604167 73 4 0.7459277 110 8 0.816176 199 10 0.546288 91 7 0.764815 38 4 0.777134 148 7 0.756482 229 10 0.7968594 210 10 0.681622 268 10 0.7042426 185 9 0.538824 167 10 0.396084 202 10 0.5258974 68 7 0.562372 94 9 0.692905 205 10 0.7165885 201 10 0.7384664 203 10 0.8094829 169 10 0.8729420 112 7 0.771775 201 10 0.7971825 0.7517516 0.7235993 0.8091599 0.8013136 0.737208 0.7348112 0.872190 0.8026820 0.7741027 0.7583791 0.717159 0.826365 0.7751233 0.7896457 0.3283772 NA 0.7778640 0.8156015 0.8084975 0.8262178 0.8144737 0.834002 0.7922824 0.7762890 0.841100 0.7028686 0.795113 0.8571463 0.779837 0.8400273 0.780856 0.7405598 0.5573152 0.4168571 0.59766326 0.566784 0.730360 0.7127710 0.7846725 0.8402401 0.8817335 0.8113065 1 0.787350 0.834462 -2.1597e-02 10 0.736250 0.667320 0.06892956 7.6100e-01 1.6216e-01 insignificant 1.000000 1.000000 insignificant 0.4625565 1.0248e-01 insignificant 1 1.000000 insignificant -4.2703e-02 0.26361178 insignificant 1.00000 insignificant 0.787997 0.6199783 0.1725515 10 0.753500 0.5880981 1.6540e-01 1.0883e-10 9.9998e-01 weaklyHypermeth 1.3953e-09 1.0000e+00 weaklyHypermeth 7.2947e-06 9.9978e-01 weaklyHypermeth 1.4028e-04 1.0000e+00 weaklyHypermeth 1.3925e-01 3.3208e-02 weaklyHypermeth 2.8628e-01 insignificant 0.787325 0.7923251 -0.0189020 10 0.730454 0.780924 -0.05046987 7.8953e-01 2.0725e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.3669e-01 5.2676e-02 insignificant 1.0000e+00 0.966509 insignificant -0.07254209 9.9259e-02 insignificant 1.0000e+00 insignificant 0.837454 0.6199783 0.20682990 10 0.784117 0.5880981 0.1960193 1.1581e-10 1.0000e+00 hypermethylated 1.8383e-09 1.0000e+00 hypermethylated 5.3897e-07 1.0000e+00 hypermethylated 1.6332e-05 1.0000e+00 hypermethylated 0.18195735 9.3754e-03 weaklyHypermeth 1.1161e-01 insignificant 0.834975 0.7923251 -7.8692e-04 10 0.727986 0.780924 -5.2938e-02 3.1460e-01 1.1895e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.2223e-01 0.12499280 insignificant 1.0000e+00 1.00000 insignificant -0.02983945 4.1663e-01 insignificant 1.000000 insignificant 0.619978 0.7920904 -0.1917933 10 0.5880981 0.759016 -0.1709183 9.9993e-01 7.1770e-05 weaklyHypometh 1.0000e+00 8.9712e-04 weaklyHypometh 1.0000e+00 1.5602e-05 weaklyHypometh 1.0000000 5.3799e-04 weaklyHypometh -0.21179681 4.8009e-03 weaklyHypometh 6.8585e-02 weaklyHypometh chr22 44411377 44412377 57433 ENSG00000209587 0.5802118 318 7 0.5400095 75 3 0.475717 154 7 0.5649465 201 7 0.5362637 96 5 0.679272 79 7 0.628030 115 7 0.577515 96 7 0.585979 62 5 0.622217 49 5 0.6268003 110 7 0.6197279 46 3 0.5449907 103 7 0.6038415 66 5 0.6804422 70 7 0.4047619 30 1 0.5277778 40 4 0.5029741 249 7 0.595238 43 2 0.568289 71 7 0.5698413 31 2 1.000000 5 0 0.579323 218 7 0.5538462 40 3 0.6683673 34 2 0.489417 166 7 0.726718 50 3 0.532051 27 1 0.548753 60 7 0.477572 143 7 0.5958276 203 7 0.532753 85 7 0.5328759 122 7 0.511233 53 3 0.544913 73 7 0.5714286 15 0 0.568615 79 6 0.506368 172 7 0.6284519 318 7 0.4493253 324 7 0.6284301 267 7 0.6271318 256 7 0.624957 250 7 0.6540968 0.5384294 0.6059411 0.6392114 0.6057692 0.738258 0.6797921 0.636125 0.6371662 0.6766460 0.6760165 0.671539 0.617751 0.6672855 0.7387320 0.5096899 0.6495897 0.6318566 0.6680509 0.6486072 0.6258398 0.7445643 0.645474 0.6472686 0.7292359 0.625964 0.7578570 0.663685 0.6077889 0.613571 0.5920489 0.591263 0.5801277 0.5840986 0.6161029 0.65116279 0.629493 0.576893 0.6872791 0.6424317 0.6965023 0.6852460 0.6897780 1 0.644959 0.628060 1.5739e-02 7 0.544880 0.526664 0.01821665 2.8036e-01 8.8651e-01 insignificant 1.000000 1.000000 insignificant 0.3050771 6.7889e-01 insignificant 1 1.000000 insignificant -3.2956e-02 0.46293346 lowCoverage 1.00000 lowCoverage 0.645411 0.6206226 0.0574919 7 0.575101 0.5225988 5.2503e-02 4.9184e-05 5.7435e-01 weaklyHypermeth 3.8425e-04 1.0000e+00 weaklyHypermeth 3.5250e-02 8.0946e-01 weaklyHypermeth 2.3191e-01 1.0000e+00 insignificant 3.4011e-02 8.2104e-02 insignificant 5.6665e-01 insignificant 0.644959 0.6251768 -0.0365169 7 0.544880 0.540536 0.00434491 8.9686e-01 9.8202e-02 insignificant 1.0000e+00 1.0000000 insignificant 7.4290e-01 2.1530e-01 insignificant 1.0000e+00 1.000000 insignificant -0.01840900 6.5138e-01 insignificant 1.0000e+00 insignificant 0.629490 0.6206226 0.04653157 7 0.566187 0.5225988 0.0435884 8.6055e-03 5.4707e-01 weaklyHypermeth 4.8895e-02 1.0000e+00 weaklyHypermeth 8.7430e-02 6.2266e-01 insignificant 4.8572e-01 1.0000e+00 insignificant 0.06696687 1.4082e-01 lowCoverage 8.3327e-01 lowCoverage 0.628060 0.6251768 -4.6189e-02 7 0.526664 0.540536 -1.3872e-02 9.8105e-01 3.3511e-02 weaklyHypometh 1.0000e+00 8.3777e-01 insignificant 8.8938e-01 0.22677290 insignificant 1.0000e+00 1.00000 insignificant 0.01454659 7.9310e-01 lowCoverage 1.000000 lowCoverage 0.620623 0.6260623 -0.0920135 7 0.5225988 0.617755 -0.0951561 9.8932e-01 1.3764e-04 weaklyHypometh 1.0000e+00 1.5977e-03 weaklyHypometh 9.9638e-01 2.3554e-03 weaklyHypometh 1.0000000 3.0992e-02 weaklyHypometh -0.05242028 2.2155e-01 insignificant 1.0000e+00 insignificant chr22 44419677 44420677 57436 ENSG00000209587 0.2243761 1597 29 0.1746712 836 33 0.202222 869 30 0.1943150 1586 31 0.1877381 509 28 0.303055 1460 31 0.199149 1097 31 0.230636 918 33 0.219830 888 31 0.282697 828 31 0.2178394 1160 33 0.2580518 881 27 0.2018244 885 31 0.4724149 120 6 0.2106047 1001 33 0.1142058 671 32 0.0610674 828 25 0.2562877 2133 29 0.238217 1014 33 0.281138 1275 31 0.2805282 439 31 0.193671 1011 28 0.214533 985 31 0.2385036 446 27 0.2937009 990 28 0.239649 1340 31 0.186335 837 33 0.155778 334 23 0.217712 785 30 0.238249 1327 33 0.2312506 1179 31 0.291190 1569 31 0.1018461 823 33 0.133411 725 31 0.067308 426 21 0.1700178 550 26 0.154016 379 33 0.177527 1117 31 0.2102474 1712 33 0.2952717 1469 33 0.2247961 1493 28 0.1879568 1438 29 0.212195 1470 32 0.1381021 0.0870610 0.1337050 0.0982660 0.1127861 0.143720 0.1162396 0.137109 0.1336266 0.1360966 0.1358586 0.120288 0.100763 0.1197755 0.1441728 0.1250126 0.1083823 0.1424164 0.1384916 0.1206920 0.1662972 0.1062472 0.124946 0.1331271 0.1677406 0.130433 0.1172657 0.132316 0.1431987 0.116251 0.1275169 0.163240 0.0660080 0.0900283 0.0703656 0.09988286 0.085393 0.090570 0.1428080 0.1750885 0.1255578 0.1195441 0.1493141 21 0.167316 0.184576 -8.3873e-03 31 0.228792 0.216937 0.01185566 9.9344e-01 2.7327e-01 insignificant 1.000000 1.000000 insignificant 0.9936689 3.7491e-01 insignificant 1 1.000000 insignificant -5.2414e-03 0.81067117 insignificant 1.00000 insignificant 0.167357 0.1514925 0.0448735 31 0.231629 0.1635399 6.8089e-02 7.1075e-22 1.5084e-01 weaklyHypermeth 1.9209e-20 1.0000e+00 weaklyHypermeth 5.5517e-12 9.9214e-01 weaklyHypermeth 2.7758e-10 1.0000e+00 weaklyHypermeth 9.2496e-02 1.8592e-03 weaklyHypermeth 2.5524e-02 weaklyHypermeth 0.167146 0.1926932 -0.0166273 31 0.223446 0.233400 -0.00995447 7.1833e-01 3.5368e-02 weaklyHypometh 1.0000e+00 0.6654214 insignificant 8.7535e-01 5.5890e-02 insignificant 1.0000e+00 0.980531 insignificant 0.00042355 9.8705e-01 insignificant 1.0000e+00 insignificant 0.184658 0.1509340 0.05671769 31 0.221653 0.1540516 0.0676010 1.2632e-15 4.9295e-01 weaklyHypermeth 2.8708e-14 1.0000e+00 weaklyHypermeth 2.6707e-10 9.9993e-01 weaklyHypermeth 1.3081e-08 1.0000e+00 weaklyHypermeth 0.09773737 9.7215e-04 weaklyHypermeth 1.5680e-02 weaklyHypermeth 0.184684 0.1926376 -5.6456e-03 31 0.226046 0.226587 -5.4078e-04 5.4210e-01 1.9878e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.0720e-01 0.11930191 insignificant 1.0000e+00 1.00000 insignificant 0.00566492 8.0334e-01 insignificant 1.000000 insignificant 0.151470 0.1926121 -0.0646954 31 0.1663639 0.221551 -0.0551875 9.9065e-01 3.6907e-14 weaklyHypometh 1.0000e+00 1.9425e-12 weaklyHypometh 1.0000e+00 1.0271e-08 weaklyHypometh 1.0000000 1.2838e-06 weaklyHypometh -0.09207246 5.5664e-03 weaklyHypometh 7.5222e-02 weaklyHypometh chr22 44685877 44686877 57447 ENSG00000219324 0.9038476 507 14 0.7773299 133 10 0.885414 213 14 0.9075023 442 13 0.8352381 99 10 0.786408 644 13 0.602306 128 6 0.896200 305 14 0.876984 110 9 0.843643 161 7 0.9110879 329 14 0.9603175 67 6 0.9222666 191 11 0.8677778 155 11 0.8091919 179 14 1.0000000 52 3 0.7500000 4 0 0.9366403 1130 14 0.913036 354 14 0.763603 358 13 0.9614850 100 11 0.878375 149 12 0.902477 162 10 0.8285714 67 9 0.9117133 142 9 0.883992 285 14 0.827297 189 11 0.423077 32 3 0.906937 331 14 0.897080 291 14 0.9237187 338 14 0.943291 447 14 0.6287520 154 10 0.560172 359 11 0.723509 479 14 0.6964286 30 4 0.503877 259 13 0.834196 376 14 0.8523562 457 10 0.9367651 393 14 0.8671911 409 9 0.8693703 607 10 0.950395 373 10 0.9284777 0.9096662 0.9245057 0.9114784 0.9178940 0.827980 0.7991435 0.898906 0.8813288 0.8898350 0.9172035 0.938717 0.908239 0.9422108 0.8964347 0.9362920 0.8915651 0.9207024 0.9269292 0.8363752 0.9710729 0.9203719 0.894282 0.9188144 0.9302851 0.927419 0.8698331 0.666681 0.9251805 0.912130 0.9391753 0.943787 0.6017058 0.4027465 0.6983464 0.60768115 0.459797 0.848631 0.8767294 0.9387634 0.9163241 0.8988229 0.9432644 3 0.909304 0.906830 -1.6479e-02 14 0.888163 0.900185 -0.01202187 8.4225e-01 2.3678e-02 weaklyHypometh 1.000000 0.789274 insignificant 0.8512877 1.2311e-01 insignificant 1 1.000000 insignificant 1.0528e-04 0.99819364 insignificant 1.00000 insignificant 0.909304 0.6222088 0.2886001 14 0.888163 0.6581995 2.2996e-01 7.0617e-27 1.0000e+00 hypermethylated 2.4351e-25 1.0000e+00 hypermethylated 1.2273e-08 9.9575e-01 hypermethylated 3.7192e-07 1.0000e+00 hypermethylated 1.9962e-01 7.1472e-03 weaklyHypermeth 8.2152e-02 weaklyHypermeth 0.909304 0.9517642 -0.0203160 13 0.888163 0.887755 0.00040833 7.5867e-01 3.6947e-02 weaklyHypometh 1.0000e+00 0.6654214 insignificant 8.8368e-01 1.2239e-01 insignificant 1.0000e+00 1.000000 insignificant -0.03777584 2.0678e-01 insignificant 1.0000e+00 insignificant 0.906830 0.6222088 0.28378938 14 0.900185 0.6581995 0.2419855 7.6111e-18 1.0000e+00 hypermethylated 2.1142e-16 1.0000e+00 hypermethylated 2.8163e-07 9.9773e-01 hypermethylated 9.0849e-06 1.0000e+00 hypermethylated 0.19951218 8.7110e-03 weaklyHypermeth 1.0495e-01 insignificant 0.906830 0.9517642 1.4593e-03 13 0.900185 0.887755 1.2430e-02 5.2926e-01 5.7528e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.8082e-01 0.30589960 insignificant 1.0000e+00 1.00000 insignificant -0.03788112 4.2106e-01 insignificant 1.000000 insignificant 0.622209 0.9517642 -0.3251331 13 0.6581995 0.887755 -0.2295553 1.0000e+00 1.3446e-07 hypomethylated 1.0000e+00 2.5370e-06 hypomethylated 1.0000e+00 1.2561e-05 hypomethylated 1.0000000 4.6226e-04 hypomethylated -0.23739330 3.1898e-03 weaklyHypometh 4.9074e-02 weaklyHypometh chr22 44700277 44701277 57449 ENSG00000219324 0.7427958 189 6 0.8849608 152 6 0.920595 96 4 0.8684180 134 5 0.9097222 48 2 0.678790 265 7 0.781654 62 3 0.904902 130 5 0.835758 108 5 0.917783 73 5 0.9093840 175 5 0.6785714 15 2 0.9242412 132 5 0.9210074 79 4 0.7826634 65 4 0.8333333 35 2 0.6666667 3 0 0.7323705 229 5 0.911049 208 3 0.948057 115 3 0.9318182 80 5 0.804791 77 5 0.895351 88 5 0.9041667 45 3 0.8505051 67 5 0.812525 223 6 0.873204 104 5 0.537255 26 2 0.878512 179 5 0.792829 243 6 0.8159596 225 6 0.817953 240 7 0.8426848 148 6 0.891214 105 2 0.853741 100 7 0.8888889 49 2 0.863829 108 5 0.698048 294 7 0.6575758 95 2 0.8094047 162 5 0.9272482 136 4 0.8760870 118 2 0.931254 97 4 0.7642223 0.7591075 0.7913655 0.8639363 0.7758799 0.879040 0.7070751 0.834764 0.8043761 0.8825989 0.8901207 0.912675 0.871949 0.8912929 0.7176456 0.6917349 0.5769470 0.8754720 0.8532718 0.8303488 0.8926219 0.7494437 0.898250 0.8391563 0.6811908 0.824787 0.8633749 0.578297 0.8385212 0.806680 0.7618797 0.912935 0.7372634 0.6865119 0.9855072 0.95007651 0.878008 0.647190 0.6920572 0.8038183 0.8114161 0.6917364 0.7888887 2 0.848090 0.841709 7.4127e-03 5 0.777218 0.854341 -0.07712256 1.5681e-01 9.6764e-01 insignificant 1.000000 1.000000 insignificant 0.1437527 9.7249e-01 insignificant 1 1.000000 insignificant 1.1397e-02 0.75506544 lowCoverage 1.00000 lowCoverage 0.848827 0.7947761 0.0625727 5 0.874371 0.7461509 1.2822e-01 9.6916e-04 5.7810e-01 weaklyHypermeth 6.2933e-03 1.0000e+00 weaklyHypermeth 5.0560e-01 4.1626e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -2.0982e-03 9.5484e-01 lowCoverage 1.0000e+00 lowCoverage 0.848090 0.7693575 0.0640288 2 0.777218 0.780814 -0.00359582 1.6607e-01 4.8182e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 6.3356e-01 3.2906e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage -0.00267786 9.6286e-01 lowCoverage 1.0000e+00 lowCoverage 0.841609 0.7947761 0.03544198 5 0.836134 0.7461509 0.0899827 5.8261e-02 4.2000e-01 insignificant 2.7743e-01 1.0000e+00 insignificant 8.0833e-01 1.8796e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01349513 7.4980e-01 lowCoverage 1.0000e+00 lowCoverage 0.841080 0.7710049 6.4948e-02 2 0.743230 0.891925 -1.4870e-01 5.4702e-01 3.5151e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 8.2991e-01 0.08876186 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.01407478 8.1710e-01 lowCoverage 1.000000 lowCoverage 0.794776 0.7706271 -0.0096188 2 0.7461509 0.878416 -0.1322651 7.2827e-01 5.6972e-02 lowCoverage 1.0000e+00 2.9519e-01 lowCoverage 8.8211e-01 2.8510e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage -0.00057966 9.9241e-01 lowCoverage 1.0000e+00 lowCoverage chr22 44708977 44709977 57451 ENSG00000219324 0.7445578 161 10 0.7826874 449 11 0.628519 295 11 0.9355529 160 7 0.8946565 195 11 0.891219 244 8 0.804396 193 11 0.887948 181 10 0.859454 166 11 0.876898 137 11 0.9028479 523 11 0.8246451 96 10 0.7907104 264 11 0.8031746 39 5 0.7611110 234 11 0.6155844 51 7 0.7765263 74 7 0.4570023 121 7 0.858199 362 11 0.852138 194 8 0.8431608 171 11 0.842758 39 4 0.891205 168 11 0.7672176 121 7 0.7933333 18 1 0.898060 441 11 0.904690 108 6 0.736546 80 6 0.924859 313 9 0.874981 441 11 0.9423456 468 11 0.934319 258 7 0.0113832 380 11 0.046572 241 11 0.142857 212 6 0.0773083 115 4 0.085279 393 10 0.134086 493 12 0.8727608 163 7 0.6771503 201 10 0.7864235 113 5 0.6326599 72 6 0.649897 151 11 0.8838863 0.7640488 0.7454154 0.8840547 0.9140840 0.907353 0.8410157 0.918725 0.8060972 0.8339858 0.9062896 0.892033 0.697559 0.8161696 0.7214475 0.5827957 0.6203165 0.6497605 0.8870673 0.8203022 0.7653741 0.8497510 0.915758 0.7232551 0.8280819 0.829257 0.8621033 0.840637 0.8820980 0.807593 0.9009732 0.888668 0.0140869 0.0203456 0.0100705 0.06227447 0.039353 0.041595 0.7340399 0.6238506 0.7817124 0.7962121 0.6213562 3 0.828205 0.873191 -4.5935e-02 10 0.821701 0.862323 -0.04062233 9.9986e-01 2.2747e-03 weaklyHypometh 1.000000 0.252750 insignificant 0.9997953 8.8398e-03 weaklyHypometh 1 0.740236 insignificant -6.5398e-02 0.05296732 insignificant 1.00000 insignificant 0.828087 0.0479826 0.7910421 11 0.848057 0.0866001 7.6146e-01 3.4386e-112 1.0000e+00 hypermethylated 1.7193e-109 1.0000e+00 hypermethylated 4.3637e-25 1.0000e+00 hypermethylated 1.5532e-22 1.0000e+00 hypermethylated 7.1448e-01 2.0921e-15 hypermethylated 3.4869e-13 hypermethylated 0.827970 0.6952790 0.1366581 6 0.837387 0.741296 0.09609148 2.1944e-05 9.9412e-01 weaklyHypermeth 1.0449e-03 1.0000000 weaklyHypermeth 1.2190e-01 9.6684e-01 insignificant 1.0000e+00 1.000000 insignificant 0.07361306 2.0621e-01 insignificant 1.0000e+00 insignificant 0.873427 0.0480349 0.83681356 10 0.910633 0.0923734 0.8182595 1.5480e-99 1.0000e+00 hypermethylated 7.7401e-97 1.0000e+00 hypermethylated 1.6300e-23 1.0000e+00 hypermethylated 8.1499e-21 1.0000e+00 hypermethylated 0.77987551 5.0145e-13 hypermethylated 1.2536e-10 hypermethylated 0.873427 0.6969697 1.6546e-01 6 0.910633 0.790135 1.2050e-01 3.0752e-08 9.9999e-01 weaklyHypermeth 3.0752e-06 1.0000e+00 weaklyHypermeth 3.5853e-03 0.99955558 weaklyHypermeth 1.4939e-01 1.00000 insignificant 0.13901137 3.4593e-02 weaklyHypermeth 0.768741 insignificant 0.047983 0.6972740 -0.6604615 7 0.0866001 0.787627 -0.7010265 1.0000e+00 1.0161e-38 hypomethylated 1.0000e+00 5.0806e-36 hypomethylated 1.0000e+00 1.4133e-12 hypomethylated 1.0000000 4.7109e-10 hypomethylated -0.64086414 2.4113e-05 hypomethylated 1.8548e-03 hypomethylated chr22 44729877 44730877 57452 ENSG00000219324 0.9375000 42 3 0.6863636 48 5 0.750000 16 0 0.5960784 70 6 NA 0 0 0.780808 57 5 0.800000 14 0 0.683929 63 5 0.600000 7 0 0.800000 8 0 0.9505051 101 5 0.6666667 7 0 0.7962963 55 5 0.9523810 16 0 0.7500000 7 0 NA 0 0 NA 0 0 0.5771429 19 3 0.887352 78 4 0.833333 17 0 0.6825397 33 3 1.000000 8 0 1.000000 14 1 1.0000000 3 0 0.8357522 168 5 0.949866 133 5 0.806177 54 5 0.666667 5 0 0.805357 60 5 0.884795 99 5 0.7104950 129 6 0.844444 38 5 0.7642857 50 3 0.857069 92 5 NA 0 0 0.6423611 118 6 0.636905 30 4 0.795897 132 7 0.6250000 28 0 0.6853054 51 4 0.7638889 18 1 0.3333333 18 3 0.900000 23 3 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0 0.825040 0.846568 -2.0661e-02 4 0.753760 0.826654 -0.07289414 9.6511e-01 7.1999e-01 lowCoverage 1.000000 1.000000 lowCoverage 0.9822087 6.4766e-01 lowCoverage 1 1.000000 lowCoverage -8.1291e-02 0.08967786 lowCoverage 1.00000 lowCoverage 0.831169 0.7159905 0.1224921 4 0.865707 0.7713651 9.4342e-02 5.2177e-02 9.9696e-01 lowCoverage 2.5577e-01 1.0000e+00 lowCoverage 2.8670e-01 9.9910e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 2.8247e-02 6.0446e-01 lowCoverage 1.0000e+00 lowCoverage 0.831169 0.6521739 0.1974410 3 0.865707 0.723960 0.14174720 5.7518e-03 9.9929e-01 lowCoverage 1.3072e-01 1.0000000 lowCoverage 3.1292e-01 9.8676e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 0.10604480 3.3297e-01 lowCoverage 1.0000e+00 lowCoverage 0.847297 0.7132701 0.13868067 5 0.809320 0.7275619 0.0817578 1.5916e-02 9.9971e-01 weaklyHypermeth 8.5114e-02 1.0000e+00 weaklyHypermeth 1.8053e-01 9.9926e-01 insignificant 8.7636e-01 1.0000e+00 insignificant 0.10953750 7.9784e-02 lowCoverage 5.5793e-01 lowCoverage 0.848444 0.6521739 2.0882e-01 3 0.899244 0.723960 1.7528e-01 7.7819e-05 9.9682e-01 lowCoverage 3.1128e-03 1.0000e+00 lowCoverage 7.5272e-02 0.99648966 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.18733556 1.1933e-01 lowCoverage 1.000000 lowCoverage 0.715990 0.6521739 0.0642117 3 0.7713651 0.723960 0.0474055 3.5967e-01 9.1061e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.8315e-01 8.1685e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage 0.07779806 4.8278e-01 lowCoverage 1.0000e+00 lowCoverage chr22 44878395 44879395 57456 MIRLET7B ENSG00000197182 0.9243971 1344 43 0.8565638 783 38 0.902513 779 43 0.9532162 824 34 0.9056910 520 31 0.909437 1234 43 0.908016 646 31 0.905407 763 37 0.891482 853 39 0.938581 824 38 0.9145511 951 43 0.8952699 469 24 0.9469924 1065 43 0.9551323 168 8 0.8751016 713 34 0.8278093 371 19 0.8058669 427 22 0.9484781 1332 37 0.937914 714 32 0.919244 1088 43 0.8733347 448 31 0.913305 511 32 0.881928 866 38 0.8296680 418 28 0.9312630 535 30 0.900736 1062 38 0.823333 647 39 0.793234 342 18 0.875299 718 33 0.918196 1014 38 0.8924615 1035 41 0.934847 1673 43 0.5481330 655 36 0.599393 875 43 0.667952 542 17 0.8476298 342 21 0.612531 611 36 0.859409 1087 40 0.8707900 1234 33 0.9355764 1436 43 0.9526019 849 37 0.9214517 1439 37 0.930677 1245 39 0.9357053 0.8734110 0.9250397 0.9508112 0.9274039 0.930715 0.9091614 0.929294 0.9094750 0.9532263 0.9430509 0.932051 0.933425 NA 0.9167294 0.8409611 0.8044113 0.9310647 0.9334337 0.9450052 0.9191861 0.9163921 0.911620 0.9183377 0.9650613 0.953528 0.8400308 0.888746 0.9104970 0.953654 0.9480732 0.951276 0.6733724 0.7228229 0.7726308 0.83834435 0.704682 0.890278 0.9092554 0.9275939 0.9261268 0.9250126 0.9383166 15 0.923746 0.925718 -2.2415e-03 41 0.903301 0.881372 0.02192857 2.5211e-01 5.3822e-01 insignificant 1.000000 1.000000 insignificant 0.2797465 5.1262e-01 insignificant 1 1.000000 insignificant 2.5449e-02 0.12108634 insignificant 1.00000 insignificant 0.923746 0.7369703 0.1831632 40 0.903301 0.6576507 2.4565e-01 3.3953e-85 1.0000e+00 weaklyHypermeth 1.1318e-82 1.0000e+00 weaklyHypermeth 4.6596e-25 1.0000e+00 weaklyHypermeth 1.5532e-22 1.0000e+00 weaklyHypermeth 2.1691e-01 9.8185e-03 weaklyHypermeth 1.0684e-01 insignificant 0.923795 0.9372581 -0.0076727 39 0.908679 0.930135 -0.02145614 7.3393e-01 2.8069e-02 weaklyHypometh 1.0000e+00 0.5728330 insignificant 8.5481e-01 2.2501e-01 insignificant 1.0000e+00 1.000000 insignificant -0.01613619 3.5696e-01 insignificant 1.0000e+00 insignificant 0.925774 0.7370469 0.18722466 39 0.883951 0.6607452 0.2232057 1.1767e-51 1.0000e+00 weaklyHypermeth 2.9417e-49 1.0000e+00 weaklyHypermeth 7.9941e-19 1.0000e+00 weaklyHypermeth 2.6647e-16 1.0000e+00 weaklyHypermeth 0.19145919 1.5650e-02 weaklyHypermeth 1.5930e-01 insignificant 0.925974 0.9372783 -3.8480e-03 39 0.903594 0.931687 -2.8093e-02 7.4221e-01 1.2771e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.2085e-01 0.28190393 insignificant 1.0000e+00 1.00000 insignificant -0.04158560 5.0385e-02 insignificant 0.913686 insignificant 0.737470 0.9372884 -0.1834954 37 0.6824843 0.933172 -0.2506881 1.0000e+00 2.7058e-25 weaklyHypometh 1.0000e+00 4.5097e-23 weaklyHypometh 1.0000e+00 5.1081e-12 weaklyHypometh 1.0000000 1.2770e-09 weaklyHypometh -0.23304479 6.7942e-03 weaklyHypometh 8.8662e-02 weaklyHypometh chr22 44880395 44881395 57457 MIRLET7B ENSG00000197182 0.9102397 219 6 0.8946350 323 6 0.849136 241 6 0.9642857 134 3 0.9270608 174 6 0.848936 227 6 0.961990 162 6 0.896593 194 6 0.868452 196 6 0.896927 255 6 0.8299162 239 6 0.8488527 126 5 0.9232670 232 6 0.8835979 153 3 0.8959989 278 6 0.8642485 106 4 0.9444444 29 4 0.8740056 201 6 0.901648 253 6 0.903545 196 6 0.8931658 103 6 0.768488 101 4 0.796153 160 6 0.9308791 108 6 0.9195906 44 3 0.962804 277 5 0.915656 243 6 0.852513 117 6 0.926895 292 6 0.894090 346 6 0.9413732 276 6 0.864098 224 6 0.3297387 229 6 0.463002 196 6 0.483365 296 4 0.4895202 47 6 0.463309 205 6 0.599350 257 6 0.7208838 152 5 0.7822476 217 6 0.6636866 160 5 0.7931462 148 5 0.875363 149 3 0.8692347 0.8413373 0.8802651 0.9276533 0.9018250 0.857988 0.9387007 0.876734 0.8937442 0.8562124 0.8653939 0.848001 0.919092 0.8860696 0.9134522 0.8140046 0.9271637 0.8392029 0.9179932 0.8771658 0.8712987 0.8534217 0.764374 0.8561180 0.8830677 0.934357 0.8898113 0.746338 0.9453874 0.902417 0.9187540 0.850437 0.3178030 0.3258159 0.3830724 0.57032212 0.443948 0.677072 0.8543893 0.8296840 0.7723961 0.8267759 0.8625438 3 0.882174 0.893060 -1.1286e-02 6 0.885305 0.905378 -0.02007358 9.4437e-01 1.1854e-01 insignificant 1.000000 1.000000 insignificant 0.6612300 5.3856e-01 insignificant 1 1.000000 insignificant 5.5800e-03 0.77219727 insignificant 1.00000 insignificant 0.882174 0.4666667 0.4188197 6 0.885305 0.4785197 4.0679e-01 4.0282e-36 1.0000e+00 hypermethylated 2.1201e-34 1.0000e+00 hypermethylated 3.5935e-13 1.0000e+00 hypermethylated 2.9946e-11 1.0000e+00 hypermethylated 4.2301e-01 3.8693e-05 hypermethylated 1.1364e-03 hypermethylated 0.882174 0.8292978 0.0527614 6 0.885305 0.787094 0.09821075 1.6271e-05 9.9983e-01 weaklyHypermeth 8.1355e-04 1.0000000 weaklyHypermeth 8.1230e-05 9.9999e-01 weaklyHypermeth 6.7692e-03 1.000000 weaklyHypermeth 0.12732360 2.1453e-02 lowCoverage 4.4694e-01 lowCoverage 0.893060 0.4666667 0.42825532 6 0.905378 0.4785197 0.4268588 5.9387e-25 1.0000e+00 hypermethylated 2.5821e-23 1.0000e+00 hypermethylated 1.6773e-12 1.0000e+00 hypermethylated 1.8636e-10 1.0000e+00 hypermethylated 0.41742802 8.9231e-06 hypermethylated 3.3048e-04 hypermethylated 0.893060 0.8292978 6.0814e-02 6 0.905378 0.787094 1.1828e-01 7.1560e-06 9.9944e-01 weaklyHypermeth 4.2094e-04 1.0000e+00 weaklyHypermeth 4.5117e-04 0.99913103 weaklyHypermeth 2.7025e-02 1.00000 weaklyHypermeth 0.12174360 2.2068e-02 lowCoverage 0.649054 lowCoverage 0.466667 0.8292978 -0.3683512 6 0.4785197 0.787094 -0.3085744 9.9988e-01 5.9271e-09 hypomethylated 1.0000e+00 1.3471e-07 hypomethylated 9.9918e-01 2.0088e-06 hypomethylated 1.0000000 8.7337e-05 hypomethylated -0.29568442 2.4257e-04 lowCoverage 8.3645e-03 lowCoverage chr22 44882695 44883695 57458 MIRLET7B ENSG00000197182 0.9217574 439 11 0.8249735 281 11 0.860549 338 11 0.9420601 497 11 0.9434652 281 11 0.908479 652 11 0.845951 366 11 0.863628 267 11 0.884678 387 11 0.916248 358 11 0.8222353 395 11 0.8648103 254 11 0.8978265 373 11 0.9124115 177 11 0.9012522 350 11 0.8261314 220 9 0.7350000 57 4 0.8837754 471 9 0.906592 460 11 0.829501 490 11 0.9027719 165 7 0.911157 185 8 0.911661 322 9 0.7790887 222 11 0.9229240 140 6 0.892286 423 11 0.767370 366 11 0.757307 243 11 0.791597 381 11 0.804389 442 11 0.8036498 444 11 0.919536 589 11 0.2963948 279 9 0.445667 480 11 0.605610 398 9 0.5497965 63 6 0.472849 385 11 0.471959 592 11 0.8349144 540 11 0.9370222 393 11 0.8577260 321 9 0.8496934 585 9 0.933434 376 9 0.8987196 0.8551718 0.8696315 0.9196282 0.9136504 0.876754 0.9091732 0.900844 0.8506671 0.9053128 0.8784760 0.842570 0.860864 0.8711643 0.8900587 0.8941958 0.7677258 0.8411943 0.8882469 0.8896107 0.8930767 0.8651590 0.900170 0.8725575 0.8960436 0.895343 0.8073666 0.893388 0.8664190 0.866195 0.8458094 0.911624 0.3654181 0.4488565 0.5488588 0.57064809 0.478417 0.501457 0.9042425 0.8874948 0.8876767 0.9018079 0.9181913 7 0.894670 0.875510 1.3648e-02 11 0.843985 0.791352 0.05263304 2.2200e-01 9.9957e-01 insignificant 1.000000 1.000000 insignificant 0.7146980 9.7064e-01 insignificant 1 1.000000 insignificant 2.7588e-02 0.23660563 insignificant 1.00000 insignificant 0.894722 0.4333182 0.4582958 11 0.821622 0.4201694 4.0145e-01 1.0943e-75 1.0000e+00 hypermethylated 2.7358e-73 1.0000e+00 hypermethylated 3.5160e-20 1.0000e+00 hypermethylated 8.7900e-18 1.0000e+00 hypermethylated 4.0085e-01 1.3737e-04 hypermethylated 3.1947e-03 hypermethylated 0.894678 0.9151242 -0.0131602 11 0.808801 0.771433 0.03736883 9.5939e-01 2.5355e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.8729e-01 1.0532e-01 insignificant 1.0000e+00 1.000000 insignificant -0.00799172 7.5550e-01 insignificant 1.0000e+00 insignificant 0.876215 0.4333182 0.44316076 11 0.819461 0.4201694 0.3992913 1.6221e-47 1.0000e+00 hypermethylated 3.2442e-45 1.0000e+00 hypermethylated 1.1651e-14 1.0000e+00 hypermethylated 2.9127e-12 1.0000e+00 hypermethylated 0.37326530 8.8620e-05 hypermethylated 2.4617e-03 hypermethylated 0.875511 0.9151242 -2.6631e-02 11 0.742538 0.771433 -2.8895e-02 9.9996e-01 6.8118e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9908e-01 0.26110309 insignificant 1.0000e+00 1.00000 insignificant -0.03557978 2.5074e-01 insignificant 1.000000 insignificant 0.433257 0.9159512 -0.4705298 11 0.4135169 0.835719 -0.4222017 1.0000e+00 8.4441e-27 hypomethylated 1.0000e+00 2.1110e-24 hypomethylated 1.0000e+00 1.7571e-11 hypomethylated 1.0000000 3.5141e-09 hypomethylated -0.40884508 4.9050e-05 hypomethylated 2.8853e-03 hypomethylated chr22 45151895 45152895 57470 TRMU ENSG00000100416 0.1326172 196 5 0.3978353 117 5 0.330871 70 5 0.0865930 198 5 0.1359217 79 5 0.275734 215 5 0.199634 113 5 0.135106 91 5 0.074951 73 5 0.174603 33 5 0.3286319 158 5 0.1700000 24 4 0.1641414 44 4 0.2703030 38 5 0.1913919 46 3 0.2000000 26 2 0.0000000 3 0 0.1738370 316 5 0.048026 106 5 0.043304 225 5 0.3125000 39 5 0.369048 21 1 0.149270 52 5 0.3591270 62 5 0.1693519 323 5 0.278192 192 5 0.120404 45 5 0.037698 31 3 0.185483 144 5 0.245993 203 5 0.2496365 188 5 0.545457 103 5 0.3364482 138 5 0.217234 167 5 0.431796 148 3 0.4523810 50 3 0.292128 137 6 0.467913 217 5 0.1831207 235 5 0.0570475 219 5 0.0593330 153 5 0.0470085 139 4 0.089545 190 5 0.1452747 0.2454903 0.3651936 0.1122606 0.1764345 0.312641 0.1977089 0.173759 0.1478151 0.3637566 0.3596598 0.180093 0.072484 0.2961841 0.0343407 0.2846185 NA 0.1809456 0.0778200 0.0484862 0.5262346 0.5125661 0.294519 0.4179233 0.2906267 0.152779 0.1393565 0.041777 0.1911424 0.049523 0.1683182 0.548941 0.3457569 0.2687029 0.5317777 0.62830688 0.368057 0.513891 0.0228528 0.0643932 0.0628245 0.0652896 0.1243674 0 0.171283 0.197002 -1.7486e-02 5 0.196266 0.213351 -0.01708488 9.7408e-01 5.6215e-01 insignificant 1.000000 1.000000 insignificant 0.9862767 4.9241e-01 insignificant 1 1.000000 insignificant -7.5172e-02 0.11430795 lowCoverage 1.00000 lowCoverage 0.172238 0.3890187 -0.2155217 5 0.325519 0.3220113 3.5080e-03 1.0000e+00 3.2658e-07 hypomethylated 1.0000e+00 8.1646e-05 hypomethylated 9.9772e-01 7.2675e-03 weaklyHypometh 1.0000e+00 7.2675e-01 insignificant -1.8964e-01 3.4173e-03 lowCoverage 4.3257e-02 lowCoverage 0.171992 0.0576923 0.1142457 5 0.201262 0.106293 0.09496987 1.5585e-04 9.9951e-01 weaklyHypermeth 5.5662e-03 1.0000000 weaklyHypermeth 8.6770e-04 9.9996e-01 weaklyHypermeth 4.3385e-02 1.000000 weaklyHypermeth 0.08946425 2.2349e-02 lowCoverage 4.4989e-01 lowCoverage 0.196828 0.3870588 -0.20597737 5 0.195027 0.2775142 -0.0824877 9.9917e-01 1.7232e-04 hypomethylated 1.0000e+00 2.8721e-02 hypomethylated 9.9888e-01 9.3781e-02 insignificant 1.0000e+00 1.0000e+00 insignificant -0.11446999 6.4065e-02 lowCoverage 4.7107e-01 lowCoverage 0.197080 0.0568060 1.3342e-01 5 0.193861 0.060884 1.3298e-01 7.3670e-04 9.9995e-01 weaklyHypermeth 2.0464e-02 1.0000e+00 weaklyHypermeth 1.4043e-04 0.99998490 weaklyHypermeth 1.1703e-02 1.00000 weaklyHypermeth 0.16463585 2.8986e-03 lowCoverage 0.184502 lowCoverage 0.393325 0.0576923 0.3299414 5 0.4950189 0.106293 0.3887263 1.1458e-07 1.0000e+00 hypermethylated 3.8194e-05 1.0000e+00 hypermethylated 1.6071e-05 1.0000e+00 hypermethylated 0.0053571 1.0000e+00 hypermethylated 0.27910584 4.0079e-04 lowCoverage 1.1797e-02 lowCoverage chr22 45300895 45301895 57473 ENSG00000184250 0.9609568 174 5 0.9124386 148 6 0.940217 94 5 0.9800725 162 5 0.9360203 69 3 0.935380 357 5 0.914757 146 5 0.954592 100 5 0.907872 112 5 0.978986 80 5 0.9140874 170 6 0.9589443 77 5 0.9540248 145 5 0.9609043 90 5 0.9264387 122 5 0.9384615 52 3 1.0000000 14 1 0.8896416 197 5 0.973805 117 3 0.965136 323 5 0.9722222 48 6 0.900000 56 3 0.918953 192 6 0.9458333 113 6 0.8750000 44 2 0.958590 201 6 0.871038 86 5 0.943182 81 5 0.660723 137 3 0.806117 202 5 0.9502918 179 5 0.963478 257 5 0.7200626 157 6 0.531680 100 3 1.000000 86 3 1.0000000 10 0 0.807764 151 6 0.951149 176 5 0.9791122 208 5 0.9921361 232 3 0.9318182 120 3 0.9597774 150 3 0.960256 187 5 0.9200349 0.6916635 0.9161656 0.9224098 0.9204329 0.911264 0.7755163 0.899794 0.7837571 0.9792438 0.8491825 0.932988 0.938056 0.8566093 0.8566885 0.8003273 0.9884650 0.9402293 0.9449064 0.9239480 0.8918440 0.8685982 0.874452 0.7890957 0.7978723 0.884873 0.7712766 0.921059 0.9049812 0.884892 0.9087289 0.915505 0.7553199 0.7207757 0.9873460 0.98734600 0.847525 0.936823 0.9635186 0.9770024 0.8937494 0.9520938 0.9738024 2 0.912268 0.895232 2.1454e-02 5 0.957261 0.698776 0.25848475 2.3611e-01 8.8705e-01 insignificant 1.000000 1.000000 insignificant 0.1807091 7.9851e-01 insignificant 1 1.000000 insignificant 4.8018e-02 0.09374533 lowCoverage 1.00000 lowCoverage 0.912140 0.8470588 0.0720956 5 0.943014 0.8315087 1.1151e-01 6.8455e-09 9.9931e-01 weaklyHypermeth 8.1494e-08 1.0000e+00 weaklyHypermeth 1.2041e-03 9.7947e-01 weaklyHypermeth 1.2287e-02 1.0000e+00 weaklyHypermeth 1.1003e-01 2.0860e-01 lowCoverage 1.0000e+00 lowCoverage 0.912140 0.9554069 -0.0504849 5 0.943014 0.971025 -0.02801038 9.9060e-01 4.8510e-02 weaklyHypometh 1.0000e+00 0.7240290 insignificant 9.7352e-01 1.1142e-01 insignificant 1.0000e+00 1.000000 insignificant -0.01948327 1.4688e-01 lowCoverage 1.0000e+00 lowCoverage 0.896920 0.8470588 0.05429400 5 0.931701 0.8315087 0.1001925 2.5845e-04 9.8956e-01 weaklyHypermeth 1.9579e-03 1.0000e+00 weaklyHypermeth 4.7357e-03 8.0981e-01 weaklyHypermeth 4.1888e-02 1.0000e+00 weaklyHypermeth 0.06200989 4.6878e-01 lowCoverage 1.0000e+00 lowCoverage 0.896920 0.9554069 -6.6963e-02 5 0.931701 0.971025 -3.9323e-02 9.9108e-01 1.4791e-02 weaklyHypometh 1.0000e+00 7.1852e-01 insignificant 9.0641e-01 0.02791366 weaklyHypometh 1.0000e+00 1.00000 insignificant -0.06750089 2.8607e-02 lowCoverage 0.706778 lowCoverage 0.847059 0.9554069 -0.1112804 5 0.8315087 0.971025 -0.1395159 9.9998e-01 3.2704e-04 weaklyHypometh 1.0000e+00 3.2704e-03 weaklyHypometh 9.9980e-01 9.0069e-03 weaklyHypometh 1.0000000 9.0979e-02 weaklyHypometh -0.12951078 1.5058e-01 lowCoverage 7.9257e-01 lowCoverage chr22 45353895 45354895 57476 CELSR1 ENSG00000075275 0.8755360 158 7 0.7699131 136 7 0.866305 92 7 0.9218272 145 7 0.8367347 43 3 0.708612 245 7 0.828571 46 4 0.842215 115 7 0.821041 99 5 0.868810 87 6 0.8365263 145 7 0.8436375 48 5 0.6715444 165 7 0.9000000 13 1 0.8620130 67 7 0.5607553 41 1 0.7489177 34 3 0.8279287 189 7 0.842462 93 6 0.883213 162 7 0.7453490 90 7 0.646467 102 7 0.873710 108 7 0.6848696 62 5 0.8693529 72 7 0.868698 156 7 0.852124 110 7 0.669048 32 1 0.834144 134 5 0.811245 177 7 0.8746550 172 7 0.879204 250 7 0.4160247 158 7 0.346651 106 6 0.510417 50 1 0.5000000 39 2 0.533654 68 7 0.358390 178 7 0.8306397 134 6 0.7146325 161 6 0.6879685 145 6 0.7768368 164 6 0.781147 124 6 0.8869454 0.7907296 0.8281642 0.9090468 0.8384996 0.812379 0.8496855 0.821579 0.7952809 0.8601572 0.8403626 0.893047 0.694402 0.8095449 0.8584906 0.6357262 0.8249476 0.8344741 0.7989579 0.8537122 0.8107806 0.6522790 0.856372 0.7362284 0.8469817 0.876032 0.8680953 0.731866 0.8385477 0.821982 0.8681456 0.886681 0.3067873 0.2388542 0.3431118 0.27201258 0.561986 0.223953 0.7658472 0.7378926 0.7179023 0.7298354 0.7141481 1 0.840170 0.844369 -1.1736e-02 7 0.845310 0.784180 0.06112952 7.4826e-01 3.4077e-01 insignificant 1.000000 1.000000 insignificant 0.6592979 4.2436e-01 insignificant 1 1.000000 insignificant 1.5089e-02 0.64380448 insignificant 1.00000 insignificant 0.840170 0.4140234 0.4516588 7 0.845310 0.4017232 4.4359e-01 6.9593e-32 9.9590e-01 hypermethylated 3.1633e-30 1.0000e+00 hypermethylated 8.6821e-08 8.1789e-01 hypermethylated 2.5535e-06 1.0000e+00 hypermethylated 3.7164e-01 6.2040e-06 hypermethylated 2.1393e-04 hypermethylated 0.839774 0.7554945 0.0573816 6 0.751386 0.803649 -0.05226284 4.1059e-03 8.5006e-01 weaklyHypermeth 9.7759e-02 1.0000000 weaklyHypermeth 1.7278e-02 5.6787e-01 weaklyHypermeth 4.5469e-01 1.000000 insignificant 0.05758321 1.0383e-01 insignificant 1.0000e+00 insignificant 0.844369 0.4140234 0.43575610 7 0.784180 0.4017232 0.3824568 1.3812e-20 9.9953e-01 hypermethylated 4.9328e-19 1.0000e+00 hypermethylated 1.3806e-06 9.9138e-01 hypermethylated 3.9445e-05 1.0000e+00 hypermethylated 0.35654968 3.7406e-06 hypermethylated 1.6264e-04 hypermethylated 0.844369 0.7551582 7.8211e-02 6 0.784180 0.779105 5.0748e-03 4.9898e-03 8.6332e-01 weaklyHypermeth 1.0633e-01 1.0000e+00 insignificant 5.8343e-02 0.92951365 insignificant 1.0000e+00 1.00000 insignificant 0.04249399 2.6381e-01 insignificant 1.000000 insignificant 0.414023 0.7551582 -0.4141740 6 0.4017232 0.779105 -0.3773821 9.9998e-01 5.3152e-11 hypomethylated 1.0000e+00 1.6610e-09 hypomethylated 9.9923e-01 2.1478e-04 hypomethylated 1.0000000 4.6533e-03 hypomethylated -0.31405570 4.1733e-05 hypomethylated 2.6083e-03 hypomethylated chr22 45373295 45374295 57478 CELSR1 ENSG00000075275 0.8657719 151 5 0.8469251 204 7 0.925144 188 7 0.9378908 71 4 0.8472650 149 5 0.789898 268 5 0.882556 200 5 0.867083 127 5 0.867781 146 5 0.854156 143 5 0.8817760 204 5 0.9184630 155 5 0.9395299 150 5 NA 0 0 0.8935929 135 5 0.8940655 152 5 0.7735469 156 5 0.9423770 69 6 0.881465 177 5 0.863295 224 5 0.8075000 75 4 0.754945 42 3 0.903352 108 7 0.9194614 108 5 0.6319444 28 2 0.900236 224 7 0.833313 66 4 0.945811 74 4 0.940260 92 5 0.920748 215 7 0.9352094 232 7 0.893091 271 7 0.8136363 209 7 0.757679 96 5 0.936081 154 7 0.7536508 32 3 0.851406 96 5 0.797910 191 7 0.9143398 120 5 0.9202421 140 5 0.9436224 85 4 0.9715488 99 3 0.736792 94 4 0.7958419 0.8170385 0.8787313 0.8959298 0.8558866 0.786230 0.8844600 0.865763 0.8500471 0.8514981 0.8718910 0.920659 0.934174 NA 0.8717741 0.8714833 0.7700683 0.9107204 0.8498151 0.8449418 0.7960983 0.7956552 0.844145 0.9314261 0.6878165 0.926056 0.8212491 0.956276 0.9135450 0.907262 0.9049091 0.848032 0.7335132 0.6687501 0.8572032 0.77533719 0.832147 0.788808 0.9050398 0.8913607 0.8832680 0.9553142 0.8062048 2 0.871619 0.885993 -2.4756e-02 5 0.883263 0.892079 -0.00881648 6.8240e-01 1.2825e-01 insignificant 1.000000 1.000000 insignificant 0.6945957 2.5695e-01 insignificant 1 1.000000 insignificant 1.2015e-02 0.68605304 lowCoverage 1.00000 lowCoverage 0.871619 0.8251928 0.0498231 5 0.883263 0.8480288 3.5234e-02 6.2198e-03 9.0761e-01 weaklyHypermeth 3.6162e-02 1.0000e+00 weaklyHypermeth 1.1199e-01 9.8384e-01 insignificant 6.1435e-01 1.0000e+00 insignificant 5.9111e-02 9.0602e-02 lowCoverage 6.1218e-01 lowCoverage 0.871619 0.9126394 -0.0528978 5 0.883263 0.922146 -0.03888312 8.3646e-01 7.6530e-03 weaklyHypometh 1.0000e+00 0.2841775 insignificant 9.9844e-01 2.1164e-02 weaklyHypometh 1.0000e+00 0.572004 insignificant -0.01980473 6.6411e-01 lowCoverage 1.0000e+00 lowCoverage 0.885993 0.8251928 0.07097820 5 0.892079 0.8480288 0.0440504 1.3325e-02 9.0454e-01 weaklyHypermeth 7.3621e-02 1.0000e+00 weaklyHypermeth 6.0999e-02 9.3882e-01 insignificant 3.5464e-01 1.0000e+00 insignificant 0.04709556 2.4684e-01 insignificant 1.0000e+00 insignificant 0.885993 0.9126394 -1.7312e-02 5 0.892079 0.922146 -3.0067e-02 8.9800e-01 1.3516e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.0456e-01 0.33087430 insignificant 1.0000e+00 1.00000 insignificant -0.03181970 5.3905e-01 lowCoverage 1.000000 lowCoverage 0.825193 0.9126394 -0.0943354 5 0.8480288 0.922146 -0.0741171 9.9670e-01 2.2753e-02 weaklyHypometh 1.0000e+00 1.3544e-01 insignificant 9.9993e-01 1.3289e-02 weaklyHypometh 1.0000000 1.2420e-01 insignificant -0.07891526 1.5609e-01 lowCoverage 8.0047e-01 lowCoverage chr22 45379995 45380995 57479 CELSR1 ENSG00000075275 0.7518939 118 4 0.6685637 60 3 0.875275 81 6 0.9543590 110 5 0.8017473 55 4 0.920833 118 4 0.929293 58 5 0.804280 90 4 0.791667 35 4 0.966667 52 4 0.8970992 201 4 0.9315476 20 2 0.7163534 63 6 0.9236111 42 4 0.7407690 56 4 0.9333333 24 2 0.3750000 6 0 0.9646853 169 4 0.928695 150 4 0.923873 160 6 0.9130376 64 4 0.787500 37 3 0.845029 43 2 0.7430556 68 5 0.8901006 234 5 0.865408 153 6 0.744444 38 4 0.760317 57 4 0.949913 88 4 0.941449 156 6 0.8924107 91 4 0.921206 126 4 0.6743012 87 5 0.881313 52 4 0.947154 181 4 0.8181818 15 1 0.830686 145 6 0.892219 117 4 0.9186275 103 5 0.9916667 95 4 0.9425926 177 6 0.9349364 121 4 0.965899 61 5 0.9116328 0.6191342 0.8465009 0.9086235 0.9439728 0.939912 0.9011164 0.911952 0.7993421 0.9400585 0.8922201 0.868421 0.796468 0.8508772 0.8836195 0.8959847 0.8248771 0.9348086 0.9178154 0.9539474 0.9185342 0.9868421 0.877135 0.8966009 0.8471805 0.847601 0.5935673 0.850585 0.9194050 0.906839 0.8810855 0.890196 0.7753862 0.8135300 0.8539795 0.87559809 0.799977 0.874915 0.9849071 0.9808114 0.9311404 0.8918708 0.9309463 1 0.884293 0.892641 -2.9364e-03 4 0.765606 0.774570 -0.00896473 8.0856e-01 7.0034e-01 lowCoverage 1.000000 1.000000 lowCoverage 0.7763448 8.8159e-01 lowCoverage 1 1.000000 lowCoverage -1.4512e-02 0.71158831 lowCoverage 1.00000 lowCoverage 0.886951 0.8324958 0.0685339 4 0.893207 0.8554924 3.7714e-02 6.5629e-03 5.1060e-01 lowCoverage 3.7936e-02 1.0000e+00 lowCoverage 2.0606e-01 7.8709e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage -6.6533e-04 9.8955e-01 lowCoverage 1.0000e+00 lowCoverage 0.886951 0.9102334 -0.0338460 4 0.893207 0.942821 -0.04961421 9.9584e-01 2.4499e-02 lowCoverage 1.0000e+00 0.5331600 lowCoverage 9.9959e-01 1.4067e-02 lowCoverage 1.0000e+00 0.468885 lowCoverage -0.11076722 3.7693e-03 lowCoverage 1.7949e-01 lowCoverage 0.897302 0.8324958 0.06212237 6 0.903665 0.8554924 0.0481729 3.3265e-03 5.6381e-01 weaklyHypermeth 2.0283e-02 1.0000e+00 weaklyHypermeth 1.7594e-01 7.5950e-01 insignificant 8.5826e-01 1.0000e+00 insignificant 0.01384670 7.6195e-01 lowCoverage 1.0000e+00 lowCoverage 0.897302 0.9102334 -3.0103e-02 6 0.903665 0.942821 -3.9155e-02 9.6700e-01 3.2968e-02 weaklyHypometh 1.0000e+00 8.3777e-01 insignificant 9.9960e-01 0.01010672 weaklyHypometh 1.0000e+00 0.91879 insignificant -0.09625519 1.9232e-03 lowCoverage 0.165362 lowCoverage 0.832496 0.9102334 -0.0989497 6 0.8554924 0.942821 -0.0873283 9.9908e-01 3.2052e-04 weaklyHypometh 1.0000e+00 3.2704e-03 weaklyHypometh 9.9999e-01 7.0871e-03 weaklyHypometh 1.0000000 7.5394e-02 weaklyHypometh -0.11010189 3.3758e-02 lowCoverage 2.8609e-01 lowCoverage chr22 45408295 45409295 57481 GRAMD4 ENSG00000075240 0.9605263 141 5 0.8398453 81 5 0.856633 113 5 0.9388582 189 5 0.9786626 74 3 0.901863 208 5 0.792208 102 4 0.899444 92 4 0.692130 143 5 0.916340 119 5 0.8983475 117 5 0.8067117 69 5 0.7519806 121 5 0.8709150 52 2 0.9678571 83 2 0.8356140 49 2 0.7944444 75 5 0.8903280 175 5 0.901014 71 5 0.928659 180 5 0.7606443 62 5 0.843221 78 5 0.911075 145 5 0.9545752 56 2 0.9437656 79 6 0.899314 135 5 0.773087 83 5 0.872727 55 4 0.721772 107 5 0.962362 137 5 0.7991833 105 6 0.921919 205 5 0.7390708 101 6 0.612982 68 4 0.250000 126 3 0.9606481 40 3 0.948438 108 3 0.847181 87 5 0.9716792 148 5 0.9075423 177 5 0.9099109 140 4 0.8428442 160 5 0.851912 170 5 0.9566911 0.8525395 0.8680539 0.9242455 0.9452255 0.895659 0.9368121 0.938802 0.8815396 0.9155456 0.9020033 0.859184 0.914480 0.8704465 0.9368674 0.8968846 0.8308421 0.8336506 0.8902513 0.9349536 0.9387365 0.8176160 0.885309 0.8834081 0.9081792 0.914464 0.7530191 0.903995 0.8564898 0.934648 0.8987766 0.921298 0.7402173 0.4994336 0.7623778 0.98411809 0.920964 0.910406 0.9437270 0.8755221 0.9469629 0.8159357 0.8638742 2 0.899290 0.881833 2.0472e-02 5 0.769771 0.753343 0.01642869 2.2873e-01 8.0655e-01 insignificant 1.000000 1.000000 insignificant 0.7233932 6.8837e-01 insignificant 1 1.000000 insignificant 7.4820e-03 0.79998109 lowCoverage 1.00000 lowCoverage 0.899290 0.7277883 0.1448760 5 0.769771 0.6507363 1.1904e-01 7.1095e-07 7.7496e-01 weaklyHypermeth 6.9025e-06 1.0000e+00 weaklyHypermeth 1.0565e-01 4.8838e-01 insignificant 5.8692e-01 1.0000e+00 insignificant 1.4473e-01 2.4528e-01 lowCoverage 1.0000e+00 lowCoverage 0.900489 0.8905660 0.0106318 5 0.898067 0.909797 -0.01173022 6.7388e-01 6.6690e-01 insignificant 1.0000e+00 1.0000000 insignificant 7.6911e-01 7.0217e-01 insignificant 1.0000e+00 1.000000 insignificant -0.02565874 3.9526e-01 lowCoverage 1.0000e+00 lowCoverage 0.881220 0.7283019 0.11757104 5 0.721675 0.6943942 0.0272806 1.8548e-03 8.2857e-01 weaklyHypermeth 1.2123e-02 1.0000e+00 weaklyHypermeth 5.7240e-01 6.5373e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.13725030 2.7014e-01 lowCoverage 1.0000e+00 lowCoverage 0.882542 0.8905660 -1.1055e-02 5 0.878900 0.909797 -3.0897e-02 8.2912e-01 3.9347e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.9110e-01 0.61174435 insignificant 1.0000e+00 1.00000 insignificant -0.03314078 3.3926e-01 lowCoverage 1.000000 lowCoverage 0.730038 0.8905660 -0.1564019 5 0.7036368 0.909797 -0.2061600 7.9251e-01 2.9971e-02 weaklyHypometh 1.0000e+00 1.7328e-01 insignificant 6.7414e-01 4.4876e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.17039108 1.8324e-01 lowCoverage 8.8951e-01 lowCoverage chr22 45425295 45426295 57484 GRAMD4 ENSG00000075240 0.8614609 142 7 0.6642083 167 7 0.771963 126 7 0.9284847 115 4 0.8416988 48 1 0.831425 203 6 0.987654 56 1 0.959846 112 6 0.917778 38 1 1.000000 18 1 0.9036117 240 6 0.7846154 17 1 0.8689744 90 6 0.8034970 46 5 0.9696970 37 1 0.6666667 12 1 NA 0 0 0.7722600 181 9 0.930084 284 10 0.842117 142 6 0.7833333 71 6 0.750000 4 0 0.868651 110 4 0.9428571 41 3 0.9479167 61 5 0.923395 328 12 0.684039 64 6 0.636364 30 1 0.979487 232 10 0.927539 228 12 0.9370546 293 12 0.856481 140 6 0.7408527 109 4 0.876479 253 7 0.884444 205 6 NA 0 0 0.751745 96 5 0.931926 400 12 0.9380342 124 1 0.9420635 118 7 0.7945088 69 5 0.9123950 107 3 0.937198 56 1 0.9137931 0.8356164 0.8695652 0.9152542 0.8918919 0.918519 0.9629630 0.952381 0.8400000 1.0000000 0.9718310 0.923077 1.000000 0.9375000 0.9090909 0.6666667 NA 0.9166667 0.9682540 0.9892473 0.8333333 0.0000000 0.971831 1.0000000 1.0000000 0.928571 0.7619048 0.818182 1.0000000 0.906977 0.8363636 0.888889 0.8510638 0.7608696 1.0000000 NA 0.867925 0.797619 0.9423077 0.9714286 0.8648649 0.8705882 0.9347826 1 0.896286 0.916979 -2.0406e-02 6 0.836069 0.897116 -0.06104761 9.9623e-01 9.4335e-03 weaklyHypometh 1.000000 0.499295 insignificant 0.9814019 4.0176e-01 insignificant 1 1.000000 insignificant 5.1196e-03 0.89887729 lowCoverage 1.00000 lowCoverage 0.895853 0.8664158 0.0304090 6 0.780331 0.7804894 -1.5854e-04 3.9523e-01 3.1568e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.9020e-01 7.2742e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.1123e-02 6.4900e-01 lowCoverage 1.0000e+00 lowCoverage 0.897052 0.8966245 0.0203649 2 0.861920 0.911264 -0.04934368 9.3645e-02 8.6541e-03 lowCoverage 1.0000e+00 0.2976911 lowCoverage 9.9045e-01 2.0406e-02 lowCoverage 1.0000e+00 0.566833 lowCoverage -0.04662712 2.2487e-01 lowCoverage 1.0000e+00 lowCoverage 0.916979 0.8662900 0.04215085 8 0.897116 0.7648101 0.1323063 4.8794e-01 8.8606e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 2.4825e-01 8.8425e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01600362 7.5739e-01 insignificant 1.0000e+00 insignificant 0.917971 0.8966245 3.1353e-02 2 0.919972 0.911264 8.7076e-03 2.9412e-01 1.5408e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.9458e-01 0.05809134 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.05174672 2.5144e-01 lowCoverage 1.000000 lowCoverage 0.867107 0.8966245 -0.0352541 2 0.8236416 0.911264 -0.0876223 9.1243e-01 3.5109e-02 lowCoverage 1.0000e+00 1.9724e-01 lowCoverage 9.9998e-01 3.9523e-02 lowCoverage 1.0000000 2.7257e-01 lowCoverage -0.06775035 1.9479e-01 lowCoverage 9.3651e-01 lowCoverage chr22 45549195 45550195 57490 TBC1D22A ENSG00000054611 0.8669487 224 5 0.8464035 198 5 0.666346 195 5 0.8086422 219 5 0.8420589 134 5 0.907606 148 5 0.794868 173 5 0.710322 182 5 0.662230 129 6 0.766481 152 5 0.8571367 392 5 0.5365260 51 3 0.7812136 166 5 0.8083026 140 5 0.7892552 190 5 0.8055556 61 4 0.2500000 8 1 0.6229904 184 5 0.806377 361 5 0.888083 261 5 0.7057142 126 6 0.615203 104 5 0.751327 154 5 0.4878365 143 6 0.8128788 53 4 0.706971 251 5 0.680340 189 5 0.458333 91 7 0.743518 345 5 0.866100 226 6 0.9192173 200 5 0.895097 242 5 1.0000000 161 5 0.842008 184 5 0.800000 96 3 0.7083333 61 4 0.518125 116 6 0.626202 391 5 0.8855681 227 6 0.7306971 201 5 0.8199026 161 5 0.8223932 175 5 0.872603 170 5 0.8918637 0.7940904 0.8060457 0.9617026 0.9084704 0.873500 0.8570464 0.867120 0.7675245 0.9307277 0.8808017 0.849042 0.937009 0.9044360 0.9039731 0.9355698 0.8900851 0.9331368 0.8488763 0.9205035 0.9277406 0.8896876 0.916054 0.8336370 0.8771856 0.906147 0.8600062 0.861448 0.9197005 0.919313 0.9159283 0.923352 1.0000000 0.9797210 0.9863043 0.92758253 0.917467 0.842140 0.9506906 0.9040095 0.9449620 0.9805030 0.9371949 3 0.879765 0.876532 -1.6338e-02 5 0.699910 0.519414 0.18049614 6.1545e-01 3.8221e-01 insignificant 1.000000 1.000000 insignificant 0.4683655 8.3147e-01 insignificant 1 1.000000 insignificant 3.0656e-02 0.57679695 lowCoverage 1.00000 lowCoverage 0.879978 0.8883350 -0.0310614 5 0.716569 0.4804808 2.3609e-01 9.9594e-01 7.8332e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.1468e-01 6.4005e-03 weaklyHypometh 1.0000e+00 7.1117e-01 insignificant 1.7561e-03 9.8243e-01 lowCoverage 1.0000e+00 lowCoverage 0.881180 0.9421222 -0.0581318 5 0.826550 0.636891 0.18965889 9.9994e-01 2.9209e-03 weaklyHypometh 1.0000e+00 0.1825549 insignificant 9.8622e-01 6.7420e-03 weaklyHypometh 1.0000e+00 0.320971 insignificant -0.07536552 1.0019e-01 lowCoverage 1.0000e+00 lowCoverage 0.878244 0.8888889 -0.01173588 5 0.580952 0.5204439 0.0605085 9.2749e-01 5.2160e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8870e-01 1.6387e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.02889982 7.3048e-01 lowCoverage 1.0000e+00 lowCoverage 0.879792 0.9421842 -5.0209e-02 5 0.625974 0.669901 -4.3927e-02 9.9878e-01 1.5089e-02 weaklyHypometh 1.0000e+00 7.1852e-01 insignificant 9.9955e-01 0.05809774 insignificant 1.0000e+00 1.00000 insignificant -0.10602146 5.2720e-02 insignificant 0.913686 insignificant 0.890438 0.9421842 -0.0347367 5 0.5544639 0.669901 -0.1154367 7.1266e-01 5.0053e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.0826e-01 7.7461e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.07712163 3.3779e-01 lowCoverage 1.0000e+00 lowCoverage chr22 45577295 45578295 57491 TBC1D22A ENSG00000054611 0.2059393 168 11 0.3196351 179 9 0.384559 279 10 0.1556353 151 8 0.2577165 219 10 0.273539 146 8 0.273054 270 10 0.280532 203 10 0.241032 186 8 0.189042 215 8 0.3041100 300 10 0.2149061 206 9 0.2731278 217 9 0.4552469 64 2 0.2654261 265 9 0.1855125 219 7 0.0125078 168 5 0.2651865 102 6 0.216405 257 9 0.325202 127 6 0.3516667 84 6 0.270894 67 4 0.193153 158 7 0.2192713 108 9 0.3750000 63 4 0.260256 357 10 0.154524 177 8 0.174053 104 9 0.303260 153 9 0.242296 254 10 0.3557242 225 10 0.295595 174 10 0.4269414 140 8 0.490686 186 7 0.130087 90 5 0.5416667 25 2 0.366228 114 6 0.416111 356 10 0.2042362 222 13 0.2168431 193 12 0.2495069 127 7 0.0726190 98 7 0.217823 154 14 0.3172895 0.3700668 0.4240711 0.3001339 0.3387675 0.387125 0.4043781 0.379978 0.3701019 0.3583982 0.3599005 0.350452 0.347327 0.3758469 0.3931133 0.2489927 0.0489495 0.3919429 0.2879377 0.4011492 0.2860499 0.2421943 0.378354 0.3590439 0.4362930 0.340518 0.2759077 0.254956 0.3848926 0.365802 0.4399973 0.425025 0.6202682 0.5853446 0.5376456 0.55334769 0.500156 0.594107 0.4610517 0.3823402 0.4174009 0.3558440 0.3898217 2 0.247970 0.280146 6.0697e-03 10 0.202534 0.200316 0.00221766 8.3514e-01 8.6300e-01 insignificant 1.000000 1.000000 insignificant 0.8505866 9.4599e-01 insignificant 1 1.000000 insignificant -1.1392e-02 0.69872748 insignificant 1.00000 insignificant 0.255966 0.4687157 -0.1684254 10 0.280321 0.4305773 -1.5026e-01 9.9074e-01 3.2189e-16 weaklyHypometh 1.0000e+00 1.6095e-13 weaklyHypometh 9.8846e-01 8.7877e-06 weaklyHypometh 1.0000e+00 2.9292e-03 weaklyHypometh -1.4037e-01 6.2588e-02 insignificant 4.6361e-01 insignificant 0.247970 0.2355164 -0.0295083 7 0.202534 0.216671 -0.01413791 1.9962e-01 4.7320e-02 weaklyHypometh 1.0000e+00 0.7240290 insignificant 1.9373e-01 5.4331e-01 insignificant 1.0000e+00 1.000000 insignificant 0.06271012 1.2757e-01 insignificant 1.0000e+00 insignificant 0.281904 0.4687157 -0.17282335 10 0.280442 0.4305773 -0.1501351 9.6940e-01 3.6159e-11 weaklyHypometh 1.0000e+00 1.2053e-08 weaklyHypometh 9.6389e-01 2.1634e-05 weaklyHypometh 1.0000e+00 7.2115e-03 weaklyHypometh -0.12897894 8.1455e-02 insignificant 5.6176e-01 insignificant 0.280146 0.2355164 -4.2477e-02 7 0.200316 0.216671 -1.6356e-02 5.0712e-01 8.9987e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 4.3132e-01 0.65148107 insignificant 1.0000e+00 1.00000 insignificant 0.07410214 8.2464e-02 insignificant 1.000000 insignificant 0.468716 0.3206897 0.1467901 7 0.4305773 0.301522 0.1290555 1.9108e-05 9.9976e-01 weaklyHypermeth 3.8215e-03 1.0000e+00 weaklyHypermeth 3.2447e-04 9.9867e-01 weaklyHypermeth 0.0811168 1.0000e+00 weaklyHypermeth 0.20308107 1.6875e-02 weaklyHypermeth 1.8544e-01 insignificant chr22 45590495 45591495 57493 TBC1D22A ENSG00000054611 0.2000000 7 0 0.0785714 31 3 0.194444 21 1 0.4361111 25 3 0.0666667 23 3 0.297884 37 5 0.250000 19 0 0.538889 50 5 0.333333 9 0 0.583333 10 0 0.5789265 86 5 0.1666667 9 0 0.2891865 56 4 0.3333333 11 0 0.2965986 32 5 0.0000000 2 0 0.0800000 11 1 0.7192857 22 3 0.319737 152 5 0.358333 30 3 0.6666667 22 1 0.342857 17 1 0.125000 7 0 0.3142857 19 1 0.4642857 18 0 0.512674 60 5 0.448413 41 5 0.327273 27 2 0.418447 72 5 0.425177 103 5 0.5629371 83 5 0.600000 20 2 0.0571429 41 5 0.087089 73 5 0.029199 137 2 0.0000000 1 0 0.162587 58 5 0.815601 100 5 0.7000000 13 0 0.5000000 26 3 0.6000000 7 0 0.4666667 20 2 0.600000 10 0 0.1250000 0.0625000 0.2916667 0.4041667 0.0500000 0.396825 0.4375000 0.583333 0.5000000 0.5786786 0.7255326 0.250000 0.380208 0.4166667 0.4773810 0.3435287 0.3870120 0.7562500 0.3578947 0.3645833 0.7500000 0.6000000 0.125000 0.5500000 0.6875000 0.657900 0.5034722 0.572727 0.5651709 0.486016 0.6481158 0.458612 0.0357143 0.0374332 0.1357687 0.18618488 0.202214 0.825057 0.6250000 0.4166667 0.5000000 0.5000000 0.5000000 0 0.351477 0.460123 -5.9269e-02 3 0.326337 0.383791 -0.05745361 8.2417e-01 8.4330e-02 lowCoverage 1.000000 1.000000 lowCoverage 0.9061530 3.5288e-02 lowCoverage 1 1.000000 lowCoverage -1.2794e-01 0.04242531 lowCoverage 1.00000 lowCoverage 0.361290 0.2560976 0.0403474 3 0.366234 0.2549796 1.1125e-01 7.3084e-03 3.6770e-01 lowCoverage 4.1940e-02 1.0000e+00 lowCoverage 2.0518e-01 9.0532e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 1.1413e-01 4.2560e-01 lowCoverage 1.0000e+00 lowCoverage 0.366942 0.5131579 -0.1444539 0 0.412814 0.530034 -0.11721981 2.1657e-01 1.2673e-05 noCoverage 1.0000e+00 0.0043337 noCoverage 6.7837e-01 6.9218e-05 noCoverage 1.0000e+00 0.017304 noCoverage -0.26726832 5.2614e-04 lowCoverage 4.5216e-02 lowCoverage 0.462656 0.2560976 0.17702713 5 0.400137 0.2549796 0.1451575 3.3423e-04 6.5319e-01 weaklyHypermeth 2.4758e-03 1.0000e+00 weaklyHypermeth 3.5717e-02 9.7546e-01 weaklyHypermeth 2.3193e-01 1.0000e+00 insignificant 0.24206476 1.1897e-01 lowCoverage 7.3435e-01 lowCoverage 0.480603 0.5131579 -8.6002e-02 0 0.480164 0.530034 -4.9870e-02 2.1834e-02 5.8354e-04 noCoverage 3.3590e-01 9.7257e-02 noCoverage 1.2856e-01 0.00203815 noCoverage 1.0000e+00 0.30844 noCoverage -0.13933200 3.6322e-02 lowCoverage 0.789606 lowCoverage 0.257985 0.5131579 -0.1864167 0 0.3059755 0.530034 -0.2240586 8.6562e-01 7.2305e-03 noCoverage 1.0000e+00 5.1562e-02 noCoverage 9.8224e-01 3.2479e-03 noCoverage 1.0000000 3.8665e-02 noCoverage -0.38139676 2.8626e-02 lowCoverage 2.6263e-01 lowCoverage chr22 45864195 45865195 57501 ENSG00000221672 0.9330208 190 12 0.9019651 367 12 0.800949 317 12 0.8650054 84 10 0.8638988 256 12 0.907267 310 12 0.895115 380 12 0.909544 341 12 0.844880 280 12 0.928225 293 12 0.9166199 460 12 0.9012560 187 12 0.8972668 272 12 0.9915966 59 7 0.9087544 298 12 0.9193237 228 12 0.7459797 145 7 0.8722144 104 12 0.924428 297 12 0.887217 357 12 0.9796659 134 7 0.788690 33 4 0.930813 343 12 0.8897404 140 12 0.7083333 23 1 0.888603 376 12 0.911737 183 12 0.918920 150 12 0.931246 220 12 0.893761 363 12 0.9322349 426 12 0.943730 427 12 0.9430684 375 12 0.903323 271 12 0.944248 569 12 0.8285714 34 3 0.914864 202 12 0.896600 408 12 0.9252976 226 12 0.8304659 336 12 0.9236111 97 10 0.8322674 138 7 0.861111 112 11 0.9279980 0.8837894 0.8081977 0.8735254 0.8694559 0.917122 0.8905083 0.903104 0.8365159 0.9274125 0.9017844 0.904782 0.895488 0.9312881 0.9221547 0.9222694 0.8339613 0.8664976 0.9128169 0.8938929 0.9714252 0.7718206 0.912431 0.8801422 0.8913526 0.899938 0.9136921 0.927665 0.9223717 0.900307 0.9258518 0.938513 0.9463503 0.8859538 0.9305010 0.86961230 0.900750 0.884460 0.9096908 0.8478348 0.9212398 0.8499829 0.8770325 5 0.891292 0.915188 -2.4998e-02 12 0.903679 0.846260 0.05741940 9.5845e-01 4.8605e-03 weaklyHypometh 1.000000 0.359202 insignificant 0.9936380 2.3245e-03 weaklyHypometh 1 0.345549 insignificant -2.3966e-03 0.92256872 insignificant 1.00000 insignificant 0.891292 0.9058634 -0.0158153 12 0.903679 0.9195045 -1.5825e-02 9.3373e-01 1.0258e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9729e-01 3.6822e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant -1.4386e-02 5.0476e-01 insignificant 1.0000e+00 insignificant 0.891271 0.8855886 0.0097683 12 0.895653 0.867626 0.02802671 8.2499e-03 2.5403e-01 weaklyHypermeth 1.8333e-01 1.0000000 insignificant 1.3383e-01 3.7831e-02 inconclusive 1.0000e+00 0.772068 insignificant 0.01617576 5.2340e-01 insignificant 1.0000e+00 insignificant 0.915188 0.9058634 0.01257519 12 0.846260 0.9195045 -0.0732446 5.2258e-01 5.4511e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.6038e-01 4.9039e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -0.01198968 6.6937e-01 insignificant 1.0000e+00 insignificant 0.915513 0.8855886 2.8313e-02 12 0.916782 0.867626 4.9156e-02 6.8439e-03 8.6141e-01 weaklyHypermeth 1.3419e-01 1.0000e+00 insignificant 7.0462e-02 0.71318935 insignificant 1.0000e+00 1.00000 insignificant 0.01857231 5.4828e-01 insignificant 1.000000 insignificant 0.905813 0.8855886 0.0179995 12 0.9127965 0.867626 0.0451706 1.1271e-02 8.0424e-01 weaklyHypermeth 7.5139e-01 1.0000e+00 insignificant 1.1404e-01 8.4000e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.03056199 2.9440e-01 insignificant 1.0000e+00 insignificant chr22 46452095 46453095 57508 ENSG00000216847 0.8096422 292 5 0.6284437 300 5 0.723571 53 5 0.8364358 215 5 0.7619048 21 2 0.887423 325 5 0.735714 26 2 0.884848 95 5 0.742424 35 2 0.786667 46 5 0.7916430 277 5 0.7666667 21 3 0.7201132 62 5 0.9266667 34 2 0.7606061 41 5 0.7500000 4 0 0.5000000 2 0 0.7263286 495 5 0.760623 200 5 0.754005 206 5 0.6578947 26 2 0.800855 44 4 0.876189 81 4 0.8993789 60 5 0.7832967 148 4 0.858095 211 5 0.722857 57 5 0.875000 19 2 0.835635 159 5 0.865788 290 5 0.8299599 297 5 0.801789 218 5 0.6151936 221 5 0.506429 116 5 0.328571 47 2 0.5000000 27 4 0.569667 159 5 0.577711 319 5 0.8660706 176 5 0.8709584 272 5 0.8116064 281 5 0.8253284 112 5 0.795817 238 5 0.8209056 0.6345658 0.7046512 0.7870314 0.7087486 0.878082 0.6910299 0.864150 0.7055144 0.7020672 0.7894421 0.827519 0.694991 0.9065891 0.7260395 0.5407208 NA 0.6797868 0.7538943 0.7459027 0.8826934 0.7588452 0.844312 0.8749819 0.7946035 0.829033 0.6192691 0.743371 0.7852658 0.852760 0.8000191 0.820789 0.5452452 0.4359212 0.3686935 0.35324931 0.483785 0.555719 0.7986427 0.8784934 0.7351614 0.7744038 0.8062918 1 0.779273 0.791304 -5.0893e-02 5 0.820404 0.863561 -0.04315639 9.9999e-01 5.0288e-03 weaklyHypometh 1.000000 0.359202 insignificant 0.9995985 2.6606e-02 weaklyHypometh 1 1.000000 insignificant -5.4542e-02 0.06856806 lowCoverage 1.00000 lowCoverage 0.779112 0.5421822 0.2174632 5 0.784485 0.5652049 2.1928e-01 1.6675e-16 9.9679e-01 hypermethylated 3.4740e-15 1.0000e+00 hypermethylated 1.9459e-05 9.9905e-01 hypermethylated 3.3550e-04 1.0000e+00 hypermethylated 2.4642e-01 8.5163e-04 lowCoverage 1.4194e-02 lowCoverage 0.779112 0.8239110 -0.0373384 5 0.784485 0.826263 -0.04177794 7.2887e-01 7.7301e-02 insignificant 1.0000e+00 0.8988448 insignificant 8.4365e-01 1.1271e-01 insignificant 1.0000e+00 1.000000 insignificant -0.07126993 1.1033e-02 lowCoverage 3.2451e-01 lowCoverage 0.791045 0.5421822 0.25126080 5 0.836273 0.5652049 0.2710677 2.2126e-15 9.9989e-01 hypermethylated 4.9168e-14 1.0000e+00 hypermethylated 1.9089e-06 9.9980e-01 hypermethylated 4.8947e-05 1.0000e+00 hypermethylated 0.30096625 2.5557e-04 lowCoverage 5.6794e-03 lowCoverage 0.791045 0.8239110 9.9103e-03 5 0.836273 0.826263 1.0010e-02 1.3533e-01 5.0115e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.8312e-02 0.35593095 insignificant 1.0000e+00 1.00000 insignificant -0.01672810 5.1588e-01 lowCoverage 1.000000 lowCoverage 0.542182 0.8239110 -0.2793205 5 0.5652049 0.826263 -0.2610580 1.0000e+00 5.6458e-08 hypomethylated 1.0000e+00 1.1292e-06 hypomethylated 1.0000e+00 1.2943e-05 hypomethylated 1.0000000 4.6226e-04 hypomethylated -0.31769435 3.0926e-04 lowCoverage 1.0072e-02 lowCoverage chr22 48242093 48243093 57513 ENSG00000217384 0.8937745 534 17 0.7447720 353 17 0.823426 397 15 0.9286676 214 11 0.8996331 185 17 0.793187 422 16 0.793431 427 17 0.890383 327 17 0.798894 295 15 0.936207 295 15 0.8893511 496 17 0.8830531 297 15 0.8961230 368 16 0.8714378 98 4 0.9200575 380 15 0.8278516 263 15 0.8462154 255 16 0.8930180 299 14 0.937643 252 15 0.802800 398 13 0.6731000 134 13 0.710000 96 4 0.927181 420 18 0.7027256 124 8 0.8300497 101 6 0.927209 360 17 0.725141 219 15 0.738953 176 5 0.887659 287 15 0.840271 376 17 0.8844581 344 17 0.821638 489 17 0.5025359 380 17 0.256547 412 15 0.609890 111 8 0.5035014 125 11 0.686116 270 14 0.686938 411 17 0.8820005 482 16 0.9242314 541 17 0.9000151 263 16 0.8570592 364 14 0.905696 352 16 0.9048202 0.7786473 0.7600990 0.8825278 0.8872575 0.844737 0.7488600 0.827448 0.7411899 0.8784630 0.8956412 0.873057 0.810754 NA 0.9001595 0.8562327 0.8408360 0.8478873 0.9215271 0.8629386 0.8040081 0.6773018 0.893492 0.8212437 0.8748810 0.889635 0.8339269 0.835709 0.8728419 0.837360 0.8479309 0.898048 0.4509511 0.2443124 0.5843818 0.54529114 0.609967 0.583284 0.8468189 0.8435192 0.8551008 0.8356807 0.8614352 4 0.865599 0.871081 -1.3858e-02 17 0.834549 0.822641 0.01190772 3.5915e-01 5.9106e-01 insignificant 1.000000 1.000000 insignificant 0.3853667 6.7621e-01 insignificant 1 1.000000 insignificant 5.7798e-02 0.06613846 insignificant 1.00000 insignificant 0.866127 0.5166764 0.3505156 17 0.880912 0.5319217 3.4899e-01 2.4155e-58 1.0000e+00 hypermethylated 3.4507e-56 1.0000e+00 hypermethylated 2.3532e-19 1.0000e+00 hypermethylated 4.7064e-17 1.0000e+00 hypermethylated 3.2257e-01 4.0662e-03 weaklyHypermeth 5.0827e-02 weaklyHypermeth 0.865902 0.9035964 -0.0188584 16 0.873907 0.898462 -0.02455477 9.9119e-01 5.7867e-02 insignificant 1.0000e+00 0.8150219 insignificant 7.5917e-01 2.8538e-01 insignificant 1.0000e+00 1.000000 insignificant -0.03030422 9.3302e-02 insignificant 1.0000e+00 insignificant 0.871918 0.5166764 0.36597829 17 0.868343 0.5319217 0.3364214 2.0759e-37 1.0000e+00 hypermethylated 2.5948e-35 1.0000e+00 hypermethylated 5.2764e-14 1.0000e+00 hypermethylated 8.7940e-12 1.0000e+00 hypermethylated 0.26477720 8.1526e-03 weaklyHypermeth 9.9422e-02 weaklyHypermeth 0.872950 0.9035964 -2.1548e-03 16 0.881607 0.898462 -1.6855e-02 8.2490e-01 4.2048e-02 weaklyHypometh 1.0000e+00 9.3440e-01 insignificant 3.0260e-01 0.48302137 insignificant 1.0000e+00 1.00000 insignificant -0.08810181 8.5270e-03 weaklyHypometh 0.338360 insignificant 0.516735 0.9035964 -0.3758724 16 0.5337995 0.898462 -0.3646626 1.0000e+00 1.1382e-20 hypomethylated 1.0000e+00 1.1382e-18 hypomethylated 1.0000e+00 4.0936e-11 hypomethylated 1.0000000 6.8227e-09 hypomethylated -0.35287901 2.7691e-03 weaklyHypometh 4.5395e-02 weaklyHypometh chr22 48483793 48484793 57518 C22orf34 ENSG00000188511 0.8647969 561 17 0.7295560 400 16 0.824457 502 18 0.9299327 468 13 0.8865479 330 18 0.849735 544 15 0.855923 507 16 0.902526 288 15 0.762033 438 16 0.938679 381 18 0.8785962 576 17 0.8061539 408 18 0.8356392 484 16 0.8981481 48 5 0.7826183 440 16 0.7945468 425 17 0.7035527 364 13 0.6570353 562 14 0.872176 376 18 0.856876 494 16 0.8293168 221 16 0.716825 249 10 0.853164 447 18 0.8309186 220 15 0.9341550 164 10 0.843627 444 17 0.753980 235 16 0.864281 241 16 0.865860 316 15 0.939028 443 16 0.8725788 385 15 0.862342 575 14 0.1394417 597 18 0.105751 530 18 0.045370 401 13 0.2222935 186 13 0.164027 292 18 0.097675 749 18 0.7469553 569 14 0.6853831 544 17 0.7979705 387 13 0.5847152 594 14 0.640517 546 17 0.8327933 0.8123271 0.8089265 0.9107750 0.9095500 0.864087 0.8219686 0.870235 0.8070023 0.9586759 0.8709517 0.744064 0.883890 0.8279650 0.8785368 0.7754549 0.6581350 0.6073277 0.8593241 0.8600760 0.8548723 0.5587870 0.848114 0.8985577 0.8688521 0.861297 0.8058669 0.891625 0.8476017 0.918193 0.8350054 0.886558 0.0867841 0.0629220 0.0180837 0.10213978 0.115447 0.062559 0.6833382 0.6530612 0.7656991 0.4707563 0.5810008 9 0.849232 0.854315 -1.3251e-02 17 0.835667 0.848813 -0.01314601 8.6138e-01 3.2805e-01 insignificant 1.000000 1.000000 insignificant 0.8964146 3.6169e-01 insignificant 1 1.000000 insignificant -1.5697e-02 0.53150125 insignificant 1.00000 insignificant 0.849232 0.1052632 0.7346808 18 0.835667 0.1098234 7.2584e-01 1.9077e-184 1.0000e+00 hypermethylated 1.9077e-181 1.0000e+00 hypermethylated 3.8935e-39 1.0000e+00 hypermethylated 3.8935e-36 1.0000e+00 hypermethylated 7.0238e-01 4.3639e-10 hypermethylated 2.5670e-08 hypermethylated 0.849232 0.6272727 0.2077071 16 0.835667 0.671100 0.16456703 1.8111e-25 1.0000e+00 hypermethylated 9.0554e-23 1.0000000 hypermethylated 8.1053e-13 9.9999e-01 hypermethylated 8.1053e-10 1.000000 hypermethylated 0.14036812 1.5724e-02 weaklyHypermeth 3.8599e-01 insignificant 0.854315 0.1052632 0.75752726 17 0.848813 0.1098234 0.7389898 6.3363e-133 1.0000e+00 hypermethylated 6.3363e-130 1.0000e+00 hypermethylated 4.6302e-34 1.0000e+00 hypermethylated 4.6302e-31 1.0000e+00 hypermethylated 0.71807990 2.4306e-10 hypermethylated 2.4306e-08 hypermethylated 0.854315 0.6272727 2.2887e-01 15 0.848813 0.671100 1.7771e-01 1.1357e-20 1.0000e+00 hypermethylated 1.1357e-17 1.0000e+00 hypermethylated 5.6865e-11 0.99999816 hypermethylated 5.6865e-08 1.00000 hypermethylated 0.15606471 9.8833e-03 weaklyHypermeth 0.352974 insignificant 0.105263 0.6272727 -0.5459035 16 0.1098234 0.671100 -0.5612768 1.0000e+00 3.9353e-67 hypomethylated 1.0000e+00 3.9353e-64 hypomethylated 1.0000e+00 1.0833e-22 hypomethylated 1.0000000 1.0833e-19 hypomethylated -0.56201520 4.1870e-06 hypomethylated 6.9784e-04 hypomethylated chr22 48841220 48842220 57524 TTLL8 ENSG00000138892 0.8679386 609 20 0.6958954 481 19 0.840028 621 22 0.9145996 761 20 0.8035086 322 18 0.867551 954 23 0.772365 410 18 0.858051 459 21 0.752814 605 20 0.837346 535 18 0.8472789 650 22 0.8097925 477 18 0.8947558 619 20 0.9156502 330 12 0.8773223 590 18 0.7445515 283 11 0.7729141 224 13 0.8584548 808 20 0.915796 545 21 0.857486 702 19 0.8078141 278 15 0.801951 382 19 0.864284 532 18 0.7726984 245 13 0.8571066 254 15 0.821884 573 23 0.875886 409 18 0.677537 285 16 0.842148 386 19 0.888841 612 21 0.7683987 361 14 0.852006 426 15 0.6420926 499 21 0.655471 393 20 0.660965 361 18 0.6840757 126 9 0.649945 421 20 0.602762 352 15 0.8786791 721 19 0.8661387 653 21 0.8194773 590 17 0.8342529 688 17 0.921014 702 19 0.8925938 0.8080355 0.8681532 0.9007878 0.8676733 0.905925 0.8421683 0.890978 0.8570119 0.8933785 0.9074349 0.884372 0.909739 0.9022356 0.9075715 0.8654783 0.8629978 0.8601471 0.9239525 0.8293415 0.9234965 0.8524246 0.876536 0.8598589 0.8728224 0.873849 0.8773513 0.894400 0.8863729 0.884042 0.8730832 0.872375 0.6532950 0.6835815 0.6577486 0.65058797 0.776454 0.581719 0.8976535 0.8610117 0.8896493 0.8358718 0.9026132 10 0.875831 0.870116 7.3703e-03 20 0.811157 0.755981 0.05517623 1.7664e-01 6.1505e-01 insignificant 1.000000 1.000000 insignificant 0.8100173 3.4529e-01 insignificant 1 1.000000 insignificant 1.5992e-02 0.47296678 insignificant 1.00000 insignificant 0.875991 0.6579683 0.2141802 20 0.819391 0.5923939 2.2700e-01 4.9836e-42 1.0000e+00 hypermethylated 4.1530e-40 1.0000e+00 hypermethylated 1.5251e-12 1.0000e+00 hypermethylated 9.3002e-11 1.0000e+00 hypermethylated 1.8599e-01 1.1865e-09 weaklyHypermeth 6.5915e-08 weaklyHypermeth 0.876128 0.8765285 -0.0037765 19 0.844943 0.875914 -0.03097146 2.7809e-02 2.4483e-02 weaklyHypometh 4.8787e-01 0.5331600 insignificant 3.2180e-01 2.3520e-02 weaklyHypometh 1.0000e+00 0.592106 insignificant -0.02870739 2.3265e-01 insignificant 1.0000e+00 insignificant 0.870070 0.6579926 0.21069352 20 0.799085 0.5975162 0.2015685 1.1663e-25 1.0000e+00 hypermethylated 5.5537e-24 1.0000e+00 hypermethylated 7.2206e-11 1.0000e+00 hypermethylated 4.2474e-09 1.0000e+00 hypermethylated 0.16999430 3.0308e-07 weaklyHypermeth 1.7124e-05 weaklyHypermeth 0.870695 0.8762671 -6.6531e-03 19 0.823979 0.842225 -1.8246e-02 2.0052e-01 1.8235e-02 weaklyHypometh 1.0000e+00 7.7711e-01 insignificant 2.7373e-01 0.09225099 insignificant 1.0000e+00 1.00000 insignificant -0.04469950 9.6499e-02 insignificant 1.000000 insignificant 0.659049 0.8762671 -0.2071854 19 0.6215885 0.842225 -0.2206366 1.0000e+00 1.3693e-12 hypomethylated 1.0000e+00 5.7054e-11 hypomethylated 1.0000e+00 5.7012e-07 hypomethylated 1.0000000 3.5633e-05 hypomethylated -0.21469380 2.1389e-05 hypomethylated 1.7824e-03 hypomethylated chr22 48858920 48859920 57525 TTLL8 ENSG00000138892 0.7942447 112 5 0.6572212 138 6 0.520833 41 5 0.6854220 109 5 0.6547619 47 5 0.687215 121 6 0.478431 71 5 0.701068 101 6 0.576190 37 6 0.691667 32 4 0.6048932 130 6 0.4583333 18 0 0.7168981 69 6 0.5875000 41 5 0.6812865 39 2 0.9444444 10 1 1.0000000 1 0 0.6497475 81 6 0.673016 59 5 0.711419 77 5 0.4801587 22 3 0.500000 4 0 0.505556 53 5 0.7551020 35 5 0.9250000 21 1 0.703822 106 6 0.866300 30 2 0.888889 17 2 0.673810 75 6 0.612637 126 6 0.6957050 138 6 0.686208 83 5 0.7003968 93 5 0.637374 57 6 0.556772 145 6 0.7500000 5 0 0.711111 66 6 0.700315 116 6 0.5962329 118 5 0.6255000 100 5 0.7048246 135 5 0.6427298 72 5 0.695652 124 5 0.8183109 0.7247960 0.6280488 0.7267794 0.7473868 0.780889 0.6366571 0.788774 0.6961672 0.7743902 0.6999218 0.512195 0.762364 0.6067073 0.7667950 0.7856691 NA 0.7437177 0.7932636 0.7365784 0.5476190 0.6971894 0.666667 0.8234611 0.9025730 0.825096 0.9246851 0.918699 0.6626016 0.752512 0.7789956 0.660640 0.6893148 0.7005174 0.5816099 0.54894584 0.788618 0.764771 0.7178255 0.7696138 0.7474326 0.6955412 0.7773065 0 0.635682 0.624646 -2.0158e-02 6 0.654561 0.689621 -0.03506056 6.6758e-01 8.6484e-02 insignificant 1.000000 1.000000 insignificant 0.7740387 3.2164e-02 weaklyHypometh 1 1.000000 insignificant -1.7369e-02 0.74456131 lowCoverage 1.00000 lowCoverage 0.635682 0.6058091 0.0193717 6 0.654561 0.6546299 -6.9262e-05 2.0241e-01 5.8822e-01 insignificant 8.5768e-01 1.0000e+00 insignificant 3.1340e-01 4.8656e-01 insignificant 1.0000e+00 1.0000e+00 insignificant -2.2650e-03 9.5625e-01 lowCoverage 1.0000e+00 lowCoverage 0.635682 0.6466302 -0.0011650 5 0.654561 0.659747 -0.00518592 6.4418e-01 3.1242e-01 insignificant 1.0000e+00 1.0000000 insignificant 7.0534e-01 4.5429e-01 insignificant 1.0000e+00 1.000000 insignificant 0.02074176 5.7126e-01 lowCoverage 1.0000e+00 lowCoverage 0.624646 0.6058091 0.03386929 6 0.689621 0.6546299 0.0349913 2.4885e-01 8.3445e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.3612e-01 9.0396e-01 insignificant 6.9738e-01 1.0000e+00 insignificant 0.01510425 7.7448e-01 lowCoverage 1.0000e+00 lowCoverage 0.624646 0.6466302 2.0018e-02 5 0.689621 0.659747 2.9875e-02 1.4049e-01 2.5998e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.2330e-01 0.52022195 insignificant 1.0000e+00 1.00000 insignificant 0.03811106 4.4241e-01 lowCoverage 1.000000 lowCoverage 0.605809 0.6466302 -0.0146199 5 0.6546299 0.659747 -0.0051167 3.5286e-01 2.4698e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.6865e-01 2.6286e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.02300681 5.2651e-01 lowCoverage 1.0000e+00 lowCoverage chr22 48895320 48896320 57528 MOV10L1 ENSG00000073146 0.9220779 43 3 0.7787899 95 6 0.342472 64 6 0.9325397 87 6 0.8750000 16 0 0.935990 50 2 0.838889 34 6 0.874724 109 6 0.828042 40 3 0.934524 42 5 0.8504392 176 6 0.6000000 20 1 0.8136924 128 6 0.7750000 40 2 0.7263889 79 6 0.8690476 19 2 1.0000000 16 1 0.4270635 65 3 0.887580 141 6 0.623084 64 3 0.6857143 24 2 0.149784 46 2 0.722222 18 0 0.7592593 28 2 0.7321429 28 2 0.791132 125 6 0.632440 35 2 0.558036 21 2 0.843739 136 6 0.845328 160 6 0.8718387 129 6 0.829762 54 3 0.1900883 136 6 0.083048 135 6 0.084112 285 6 0.4500000 10 0 0.339974 82 3 0.501667 83 6 0.5015873 66 6 0.5750078 77 6 0.6562500 48 2 0.4895623 34 3 0.794872 60 2 0.8697422 0.7575512 0.3548491 0.9103767 0.8843284 0.894549 0.7726368 0.826507 0.8249822 0.8992537 0.8571226 0.717361 0.747637 0.7951907 0.6604478 0.8656716 0.9487039 0.4118763 0.8350203 0.6866958 0.6776119 0.2610761 0.567164 0.8582090 0.6807036 0.754830 0.8246269 0.559168 0.8064678 0.777081 0.8313219 0.833333 0.2039386 0.0686471 0.1581811 0.29793175 0.295964 0.553881 0.4307036 0.4767340 0.5811567 0.3803709 0.6452354 0 0.777108 0.783479 -1.4259e-03 6 0.802338 0.815907 -0.01356862 5.4735e-01 2.7859e-01 insignificant 1.000000 1.000000 insignificant 0.1739285 7.7441e-01 insignificant 1 1.000000 insignificant 8.9984e-02 0.20507763 lowCoverage 1.00000 lowCoverage 0.777108 0.2328767 0.5594477 6 0.802338 0.1950075 6.0733e-01 8.6610e-31 1.0000e+00 hypermethylated 3.6088e-29 1.0000e+00 hypermethylated 6.4337e-10 1.0000e+00 hypermethylated 2.3829e-08 1.0000e+00 hypermethylated 5.1695e-01 2.8872e-04 lowCoverage 5.7744e-03 lowCoverage 0.777108 0.4877193 0.2803074 4 0.802338 0.576695 0.22564299 1.0336e-09 9.9847e-01 lowCoverage 1.1484e-07 1.0000000 lowCoverage 1.9480e-04 9.9613e-01 lowCoverage 1.2987e-02 1.000000 lowCoverage 0.18831147 2.4107e-02 lowCoverage 4.6016e-01 lowCoverage 0.780549 0.2325581 0.56815188 6 0.699349 0.1671493 0.5321993 1.7910e-27 1.0000e+00 hypermethylated 9.4265e-26 1.0000e+00 hypermethylated 6.4135e-06 1.0000e+00 hypermethylated 1.5270e-04 1.0000e+00 hypermethylated 0.42696825 8.5643e-04 lowCoverage 1.4274e-02 lowCoverage 0.783479 0.4877193 2.6279e-01 4 0.815907 0.576695 2.3921e-01 8.4150e-09 9.9988e-01 lowCoverage 9.3499e-07 1.0000e+00 lowCoverage 1.7607e-03 0.99769794 lowCoverage 8.3844e-02 1.00000 lowCoverage 0.09832732 2.4392e-01 lowCoverage 1.000000 lowCoverage 0.232877 0.4877193 -0.2406191 4 0.1950075 0.576695 -0.3816875 9.4631e-01 2.0653e-09 lowCoverage 1.0000e+00 5.1632e-08 lowCoverage 9.9976e-01 3.5401e-04 lowCoverage 1.0000000 6.4365e-03 lowCoverage -0.32864093 6.8270e-03 lowCoverage 8.8662e-02 lowCoverage chr22 48940320 48941320 57532 MOV10L1 ENSG00000073146 0.7492063 163 9 0.6200750 145 9 0.718254 45 5 0.8458415 135 4 0.7637352 109 5 0.777778 83 7 0.652116 120 9 0.823162 121 7 0.512222 60 5 0.784416 78 9 0.6924713 179 9 0.7685185 61 5 0.8698181 133 9 0.6464646 105 9 0.7039860 77 7 0.6626984 50 2 0.8010167 45 2 0.8644559 222 9 0.643939 40 3 0.780976 64 6 0.9083333 20 0 0.636364 22 0 0.681682 127 9 0.8000000 35 4 0.6804244 110 7 0.812809 81 6 0.855820 55 6 0.500000 27 2 0.809196 117 9 0.777027 113 7 0.7157278 99 9 0.627160 72 7 0.7119565 105 5 0.677066 84 8 0.589597 103 9 NA 0 0 0.639759 123 9 0.586946 83 8 0.6284612 171 9 0.7444674 122 9 0.8002443 132 8 0.9078617 109 5 0.797955 157 9 0.7305996 0.5933349 0.6992945 0.8356617 0.7533032 0.755732 0.6690476 0.794352 0.6550069 0.7728609 0.7139047 0.798354 0.870136 0.7928669 0.7710179 0.6674015 0.8242960 0.8272525 0.8518519 0.7677703 0.8456790 0.7530864 0.729555 0.7530864 0.8185178 0.834688 0.8501862 0.725763 0.7805459 0.685195 0.7381125 0.629630 0.7174584 0.6778253 0.5924716 NA 0.656121 0.571498 0.6360352 0.7397797 0.7757158 0.8744945 0.8011181 0 0.754550 0.728929 8.9379e-03 8 0.684089 0.652152 0.03193753 6.5019e-01 9.1778e-01 insignificant 1.000000 1.000000 insignificant 0.9908814 2.8413e-01 insignificant 1 1.000000 insignificant 3.4561e-04 0.99302714 insignificant 1.00000 insignificant 0.756049 0.6546185 0.1038061 8 0.754628 0.6455814 1.0905e-01 2.6378e-05 9.9999e-01 weaklyHypermeth 2.1800e-04 1.0000e+00 weaklyHypermeth 1.6752e-04 1.0000e+00 weaklyHypermeth 2.2682e-03 1.0000e+00 weaklyHypermeth 9.2993e-02 1.4661e-02 weaklyHypermeth 1.4809e-01 insignificant 0.756049 0.7568741 0.0049230 9 0.754628 0.747015 0.00761226 6.5884e-01 7.0323e-01 insignificant 1.0000e+00 1.0000000 insignificant 8.4101e-01 7.0873e-01 insignificant 1.0000e+00 1.000000 insignificant -0.04174030 4.3589e-01 insignificant 1.0000e+00 insignificant 0.749703 0.6546185 0.09831698 8 0.747074 0.6455814 0.1014928 1.0890e-04 9.9980e-01 weaklyHypermeth 8.7824e-04 1.0000e+00 weaklyHypermeth 5.2609e-05 9.9994e-01 weaklyHypermeth 9.0705e-04 1.0000e+00 weaklyHypermeth 0.09264702 4.0367e-02 weaklyHypermeth 3.4502e-01 insignificant 0.749703 0.7568741 -2.9726e-03 8 0.747074 0.747015 5.8986e-05 7.2343e-01 6.8665e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.8896e-01 0.91662713 insignificant 1.0000e+00 1.00000 insignificant -0.04208592 4.7415e-01 insignificant 1.000000 insignificant 0.654618 0.7568741 -0.0997855 8 0.6455814 0.747015 -0.1014338 9.9988e-01 9.6081e-05 weaklyHypometh 1.0000e+00 1.1577e-03 weaklyHypometh 9.9997e-01 3.2538e-04 weaklyHypometh 1.0000000 6.0256e-03 weaklyHypometh -0.13473293 3.9095e-02 weaklyHypometh 3.2019e-01 insignificant chr22 49398172 49399172 57542 MAPK8IP2 ENSG00000008735 0.5826514 209 7 0.1925748 62 6 0.492593 77 7 0.6025889 218 7 0.3715278 58 4 0.448977 139 7 0.137464 81 7 0.465488 48 3 0.455556 46 3 0.433107 51 4 0.4616558 130 7 0.4375000 47 4 0.0490431 70 4 1.0000000 3 0 0.4032738 52 4 0.0972222 43 4 0.0511642 68 4 0.4532400 267 5 0.431144 145 7 0.527424 134 5 0.5714286 58 6 0.416667 78 3 0.314815 40 6 0.1714286 40 6 0.6322518 216 3 0.428329 155 9 0.441667 32 3 0.062500 23 3 0.359875 104 7 0.516869 79 7 0.5185440 80 7 0.535540 105 6 0.2416667 105 7 0.302874 164 7 0.478992 117 5 0.4021164 76 3 0.219697 29 1 0.465844 138 9 0.5202721 129 7 0.5917042 155 9 0.5204307 169 7 0.5602273 162 9 0.692260 138 7 0.1483512 0.1587874 0.1833333 0.1590915 0.2170139 0.149233 0.0773237 0.136837 0.2069444 0.1894841 0.1659314 0.226563 0.162611 0.2140378 0.2016369 0.1807322 0.2100163 0.1826758 0.1886256 0.1785316 0.2321429 0.1698909 0.177083 0.0886409 0.1817825 0.172437 0.2208333 0.176045 0.2130257 0.199561 0.1967720 0.213974 0.1208333 0.1325075 0.1323169 0.16369048 0.010417 0.150926 0.1702381 0.2050900 0.1379442 0.1882813 0.1812418 0 0.490052 0.535183 -4.6616e-02 7 0.451910 0.544195 -0.09228485 9.0741e-01 1.1199e-02 weaklyHypometh 1.000000 0.533267 insignificant 0.9530343 1.8281e-01 insignificant 1 1.000000 insignificant -9.4498e-03 0.89192974 lowCoverage 1.00000 lowCoverage 0.489485 0.4290271 0.0265283 7 0.452546 0.5132080 -6.0662e-02 2.4108e-01 4.1454e-01 insignificant 9.9619e-01 1.0000e+00 insignificant 1.4595e-01 9.0346e-01 insignificant 7.6814e-01 1.0000e+00 insignificant 5.2845e-02 4.4480e-01 lowCoverage 1.0000e+00 lowCoverage 0.499741 0.7526596 -0.0643960 6 0.508588 0.483920 0.02466870 9.1953e-01 2.3490e-01 insignificant 1.0000e+00 1.0000000 insignificant 8.1382e-01 8.3541e-01 insignificant 1.0000e+00 1.000000 insignificant -0.17226923 7.9783e-03 lowCoverage 2.5737e-01 lowCoverage 0.536537 0.4292528 0.07628520 7 0.592855 0.5121920 0.0806629 1.1322e-01 8.1996e-01 insignificant 4.9879e-01 1.0000e+00 insignificant 3.3258e-02 9.9769e-01 weaklyHypermeth 2.2172e-01 1.0000e+00 insignificant 0.06229460 3.6510e-01 insignificant 1.0000e+00 insignificant 0.537000 0.7436620 -6.2766e-05 5 0.570950 0.425005 1.4595e-01 3.2092e-01 8.6372e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 3.4434e-01 0.99884482 insignificant 1.0000e+00 1.00000 insignificant -0.16281943 1.2841e-02 weaklyHypometh 0.423805 insignificant 0.421824 0.7478632 -0.1116854 5 0.4962269 0.488643 0.0075839 6.2486e-01 1.4118e-01 insignificant 1.0000e+00 6.3934e-01 insignificant 9.7180e-01 2.6509e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.22511403 3.3928e-03 weaklyHypometh 5.0639e-02 weaklyHypometh chr22 49406172 49407172 57543 MAPK8IP2 ENSG00000008735 0.8013299 285 6 0.7668435 312 7 0.591349 177 7 0.6166274 303 5 0.7673469 61 5 0.782868 316 6 0.510556 57 3 0.760794 145 5 0.556078 74 5 0.637681 87 5 0.7231095 201 5 0.7400000 39 4 0.5271729 144 5 0.8522222 151 5 0.6449597 123 5 0.4500000 29 3 0.6000000 5 0 0.7843274 310 5 0.830559 290 5 0.593913 258 5 0.5634921 48 3 0.617669 56 3 0.734771 139 6 0.5938161 60 5 0.8750000 24 3 0.591576 373 7 0.676667 51 3 0.739542 74 5 0.711160 268 5 0.359662 494 7 0.8429096 327 5 0.594556 287 6 0.2130175 286 7 0.109524 47 3 0.082707 161 6 0.0000000 2 0 0.197459 261 5 0.261441 294 7 0.9008631 267 5 0.8217309 145 5 0.5547915 219 5 0.6810875 172 5 0.682116 285 5 0.8780669 0.7649085 0.6024565 0.8593124 0.7403061 0.851165 0.5575914 0.820997 0.8150539 0.8433365 0.7617203 0.772671 0.577317 0.8483092 0.7513531 0.4010648 0.9393633 0.8321993 0.8675861 0.7761523 0.8198758 0.4946224 0.788538 0.7912785 0.8234741 0.744871 0.6683230 0.750091 0.7645126 0.504960 0.8198514 0.705535 0.1904458 0.0869565 0.0000000 0.14629764 0.244454 0.269583 0.9050006 0.8903618 0.7346218 0.8410731 0.7999448 3 0.778735 0.671071 1.0025e-01 5 0.666013 0.644200 0.02181331 9.3457e-05 9.9633e-01 weaklyHypermeth 0.093457 1.000000 weaklyHypermeth 0.3704753 8.1731e-01 insignificant 1 1.000000 insignificant 1.8485e-02 0.70266981 lowCoverage 1.00000 lowCoverage 0.779631 0.1883920 0.5978039 5 0.727731 0.1987784 5.2895e-01 2.6617e-45 1.0000e+00 hypermethylated 2.4197e-43 1.0000e+00 hypermethylated 2.5202e-12 1.0000e+00 hypermethylated 1.3264e-10 1.0000e+00 hypermethylated 5.3286e-01 6.0947e-07 lowCoverage 2.6499e-05 lowCoverage 0.779066 0.8226103 -0.0284233 5 0.686765 0.674432 0.01233344 8.8194e-01 4.1193e-02 weaklyHypometh 1.0000e+00 0.6957324 insignificant 9.8745e-01 5.3158e-02 insignificant 1.0000e+00 0.966509 insignificant -0.05123101 4.6842e-01 lowCoverage 1.0000e+00 lowCoverage 0.671077 0.1883920 0.49861498 5 0.613971 0.1987784 0.4151930 2.8572e-23 1.0000e+00 hypermethylated 1.0582e-21 1.0000e+00 hypermethylated 5.0215e-11 1.0000e+00 hypermethylated 3.2103e-09 1.0000e+00 hypermethylated 0.51437709 3.0822e-07 lowCoverage 1.7124e-05 lowCoverage 0.671227 0.8226103 -1.2865e-01 5 0.662225 0.674432 -1.2207e-02 9.9999e-01 2.0138e-04 weaklyHypometh 1.0000e+00 4.0277e-02 weaklyHypometh 9.8793e-01 0.01425976 weaklyHypometh 1.0000e+00 0.95065 insignificant -0.06971610 3.6446e-01 lowCoverage 1.000000 lowCoverage 0.188392 0.8241252 -0.6321207 5 0.1987784 0.770779 -0.5720005 1.0000e+00 1.6234e-25 hypomethylated 1.0000e+00 3.2468e-23 hypomethylated 1.0000e+00 3.7384e-08 hypomethylated 1.0000000 3.3985e-06 hypomethylated -0.58409319 7.7211e-05 lowCoverage 4.0637e-03 lowCoverage chrX 116150 117150 57550 NA 0.6075471 351 8 0.7332908 396 8 0.389788 289 8 0.4916754 282 8 0.3911813 164 5 0.720819 368 8 0.222454 229 8 0.510134 255 8 0.443538 341 8 0.381320 333 8 0.4931353 283 8 0.2667786 129 7 0.3011967 407 8 0.6424243 246 5 0.5835798 361 8 0.4876263 73 5 0.3635221 693 8 0.7150716 383 8 0.182858 217 8 0.157384 337 8 0.7003521 114 8 0.513738 180 8 0.659567 311 8 0.7276022 118 8 0.4333493 91 5 0.369490 436 8 0.307365 185 8 0.512441 92 8 0.307715 269 8 0.175313 498 8 0.2408125 418 8 0.482442 371 8 0.8009014 283 8 0.588402 140 7 1.000000 162 6 0.6250000 22 0 0.808007 236 7 0.814860 346 8 0.5540813 267 8 0.9068412 314 8 0.4638848 226 8 0.6311666 272 8 0.744753 267 8 0.6612378 0.7547733 0.4177359 0.5173888 0.3516057 0.790467 0.2517596 0.514417 0.3802299 0.3591498 0.4762272 0.281178 0.335662 0.6185226 0.5655521 0.3645760 0.6380388 0.6786659 0.1769378 0.1860040 0.5950960 0.5246426 0.695910 0.7295950 0.4019172 0.393378 0.2402283 0.616051 0.4291424 0.191741 0.2419633 0.457635 0.7668553 0.5058752 1.0000000 0.72015504 0.766302 0.832774 0.5778801 0.8900404 0.4916326 0.6411998 0.7502122 5 0.516050 0.396692 1.1142e-01 8 0.454279 0.363461 0.09081867 1.1752e-02 9.9334e-01 weaklyHypermeth 1.000000 1.000000 insignificant 0.6679997 8.8141e-01 insignificant 1 1.000000 insignificant 1.7507e-03 0.97890277 insignificant 1.00000 insignificant 0.516050 0.7981497 -0.2870264 8 0.454279 0.7772289 -3.2295e-01 1.0000e+00 5.5511e-14 hypomethylated 1.0000e+00 1.8504e-11 hypomethylated 1.0000e+00 3.2662e-10 hypomethylated 1.0000e+00 3.2662e-07 hypomethylated -3.1860e-01 1.4801e-03 weaklyHypometh 2.2090e-02 weaklyHypometh 0.516308 0.6805349 -0.1690265 8 0.486064 0.678974 -0.19290998 1.0000e+00 3.5141e-05 weaklyHypometh 1.0000e+00 0.0070282 weaklyHypometh 1.0000e+00 3.3909e-05 weaklyHypometh 1.0000e+00 0.011303 weaklyHypometh -0.20587912 5.2974e-02 insignificant 7.5677e-01 insignificant 0.396692 0.7981497 -0.39852106 8 0.363461 0.7772289 -0.4137682 1.0000e+00 2.0968e-17 hypomethylated 1.0000e+00 1.0484e-14 hypomethylated 1.0000e+00 6.4652e-09 hypomethylated 1.0000e+00 6.4652e-06 hypomethylated -0.32034614 1.7567e-03 weaklyHypometh 2.5460e-02 weaklyHypometh 0.396820 0.6805349 -2.9397e-01 8 0.408893 0.678974 -2.7008e-01 1.0000e+00 7.8451e-09 hypomethylated 1.0000e+00 7.8451e-06 hypomethylated 1.0000e+00 0.00010004 hypomethylated 1.0000e+00 0.05002 hypomethylated -0.20762985 5.6490e-02 insignificant 0.941507 insignificant 0.798652 0.6805349 0.1215788 8 0.8118825 0.678974 0.1329082 5.6502e-03 9.9251e-01 weaklyHypermeth 4.3463e-01 1.0000e+00 insignificant 5.2087e-03 9.8956e-01 weaklyHypermeth 0.5787485 1.0000e+00 insignificant 0.11271629 2.8394e-01 insignificant 1.0000e+00 insignificant chrX 249150 250150 57551 PPP2R3B ENSG00000167393 0.8695890 242 19 0.8192200 312 25 0.783224 660 26 0.9498446 159 7 0.7764859 544 9 0.874810 379 22 0.838109 856 11 0.777047 351 11 0.863267 614 9 0.874407 696 9 0.8072462 1117 11 0.8639023 901 9 0.8674107 714 9 0.7777778 7 0 0.8638503 874 9 0.9034025 599 11 0.8575871 637 9 0.8238951 281 14 0.869923 1112 11 0.838522 335 20 0.8305237 422 11 0.746369 70 7 0.872610 466 25 0.7951425 236 8 0.7370420 179 8 0.840894 318 25 0.773090 302 11 0.755984 344 10 0.748161 340 11 0.883206 235 21 0.8435722 256 23 0.816743 424 24 0.4413030 403 26 0.526271 707 11 0.684643 363 19 0.5468866 295 10 0.611938 413 11 0.532296 330 20 0.8475827 560 21 0.8577865 351 18 0.8386305 206 6 0.8343724 543 20 0.876390 338 16 0.8388406 0.8029579 0.7654114 0.9274110 0.8440734 0.796726 0.8690671 0.833271 0.8543611 0.8484554 0.8776998 0.845175 0.868118 0.8470796 0.8567340 0.8527302 0.8533492 0.8311758 0.8874237 0.8587064 0.7961645 0.7135542 0.875946 0.7976215 0.8095349 0.873845 0.7598551 0.773297 0.8017915 0.870712 0.7845588 0.846204 0.5927748 0.5986858 0.5868362 0.68523463 0.598554 0.665870 0.8515554 0.8910063 0.8917903 0.8535090 0.8253095 5 0.841722 0.824053 1.7906e-02 11 0.860559 0.815582 0.04497672 1.7834e-02 7.7602e-01 weaklyHypermeth 1.000000 1.000000 insignificant 0.0163010 9.9341e-01 weaklyHypermeth 1 1.000000 insignificant 4.1365e-02 0.03177678 weaklyHypermeth 1.00000 insignificant 0.841574 0.5440064 0.2602510 11 0.829825 0.5319531 2.9787e-01 3.8565e-57 1.0000e+00 hypermethylated 4.8207e-55 1.0000e+00 hypermethylated 1.6214e-18 1.0000e+00 hypermethylated 2.7024e-16 1.0000e+00 hypermethylated 2.8775e-01 1.9534e-04 hypermethylated 4.1562e-03 hypermethylated 0.841652 0.8003003 0.0126246 9 0.855196 0.844764 0.01043129 1.0020e-02 2.8738e-03 weaklyHypermeth 2.0875e-01 0.1825549 insignificant 2.6230e-01 2.2321e-03 inconclusive 1.0000e+00 0.159439 insignificant -0.00597644 6.4221e-01 insignificant 1.0000e+00 insignificant 0.824053 0.5442231 0.25511872 15 0.815582 0.5516550 0.2639270 9.9845e-36 1.0000e+00 hypermethylated 8.3204e-34 1.0000e+00 hypermethylated 9.4231e-14 1.0000e+00 hypermethylated 1.3462e-11 1.0000e+00 hypermethylated 0.24638848 2.8766e-04 hypermethylated 6.1205e-03 hypermethylated 0.824513 0.8003003 4.8858e-03 13 0.846951 0.844764 2.1862e-03 1.4630e-02 5.7567e-05 weaklyHypermeth 2.4384e-01 1.4392e-02 weaklyHypermeth 6.3675e-01 0.00004240 inconclusive 1.0000e+00 0.04240 inconclusive -0.04734104 1.2434e-02 weaklyHypometh 0.423805 insignificant 0.544077 0.8003003 -0.2261417 15 0.5472315 0.844764 -0.2975329 1.0000e+00 4.1420e-25 hypomethylated 1.0000e+00 5.1775e-23 hypomethylated 1.0000e+00 5.0943e-14 hypomethylated 1.0000000 2.5471e-11 hypomethylated -0.29372952 2.3527e-04 hypomethylated 8.3645e-03 hypomethylated chrX 362850 363850 57552 PPP2R3B ENSG00000167393 0.8046641 603 9 0.6696197 400 9 0.659593 339 9 0.8204606 444 8 0.8387126 276 10 0.850231 586 9 0.589971 337 9 0.866508 336 9 0.816845 305 9 0.658274 297 9 0.8561868 465 9 0.8673382 157 9 0.7500699 315 9 0.7122333 188 5 0.8012772 427 9 0.7955371 202 9 0.8779762 70 4 0.6048958 1071 6 0.876636 568 9 0.794674 559 9 0.7925151 153 9 0.444444 46 5 0.727567 305 9 0.8158810 181 9 0.9000000 87 5 0.923098 428 9 0.594347 408 9 0.867432 107 9 0.829538 371 9 0.834473 409 9 0.7211380 403 9 0.707913 482 9 0.4894247 239 9 0.373121 525 9 0.299987 607 6 0.8933333 24 4 0.574190 294 9 0.616204 462 9 0.6035675 544 9 0.6602841 669 9 0.6449424 462 9 0.6819478 1516 9 0.630370 455 6 0.7997736 0.5843616 0.6443396 0.7425322 0.7604484 0.864126 0.6260014 0.813571 0.8077774 0.7194372 0.8151645 0.877834 0.706708 0.7224873 0.7981944 0.8154020 0.7629672 0.5825371 0.8592973 0.7761161 0.7620204 0.6214187 0.698548 0.7565708 0.8425310 0.891143 0.6093744 0.889798 0.7960169 0.793760 0.7425879 0.698096 0.5261537 0.3169414 0.3046544 0.47251812 0.507363 0.525573 0.7174991 0.7107484 0.4827802 0.6733327 0.6470151 6 0.747482 0.765907 -1.5043e-02 9 0.755711 0.814835 -0.05912417 9.5964e-01 8.2133e-01 insignificant 1.000000 1.000000 insignificant 0.9942340 6.2426e-01 insignificant 1 1.000000 insignificant 1.2390e-02 0.78430657 insignificant 1.00000 insignificant 0.747545 0.4314272 0.3227969 9 0.802203 0.5333990 2.6880e-01 4.7370e-27 1.0000e+00 hypermethylated 1.6918e-25 1.0000e+00 hypermethylated 6.8454e-12 1.0000e+00 hypermethylated 3.1116e-10 1.0000e+00 hypermethylated 2.3454e-01 3.9967e-02 weaklyHypermeth 3.3306e-01 insignificant 0.747545 0.6579813 0.0808318 9 0.802203 0.558868 0.24333501 6.8498e-05 9.9997e-01 weaklyHypermeth 2.6345e-03 1.0000000 weaklyHypermeth 2.5143e-04 1.0000e+00 weaklyHypermeth 1.5714e-02 1.000000 weaklyHypermeth 0.13136292 2.8892e-05 weaklyHypermeth 4.8153e-03 weaklyHypermeth 0.765768 0.4314272 0.33376512 9 0.781168 0.5333990 0.2477694 6.9655e-20 1.0000e+00 hypermethylated 2.3218e-18 1.0000e+00 hypermethylated 6.2775e-09 1.0000e+00 hypermethylated 2.4144e-07 1.0000e+00 hypermethylated 0.22215211 4.9556e-02 weaklyHypermeth 3.9645e-01 insignificant 0.765699 0.6581619 9.8054e-02 9 0.759285 0.614755 1.4453e-01 2.3850e-04 9.9990e-01 weaklyHypermeth 7.6934e-03 1.0000e+00 weaklyHypermeth 5.7987e-04 0.99999394 weaklyHypermeth 3.0520e-02 1.00000 weaklyHypermeth 0.11897320 1.3138e-02 weaklyHypermeth 0.423805 insignificant 0.431163 0.6581619 -0.2534758 9 0.4867389 0.614755 -0.1280165 9.9996e-01 4.4414e-07 hypomethylated 1.0000e+00 7.7920e-06 hypomethylated 9.9994e-01 2.1760e-03 weaklyHypometh 1.0000000 2.9216e-02 weaklyHypometh -0.10317891 2.8476e-01 insignificant 1.0000e+00 insignificant chrX 1327349 1328349 57553 CRLF2 ENSG00000205755 0.2810018 406 19 0.0015193 780 21 0.046152 643 22 0.0573671 423 14 0.0164160 402 19 0.054619 766 22 0.050301 650 17 0.142998 552 17 0.224864 582 19 0.054478 735 19 0.0537599 694 22 0.0064755 611 17 0.0931102 570 18 0.0016367 213 9 0.0029371 682 18 0.0026256 469 18 0.0098966 540 11 0.0815459 441 16 0.070158 499 18 0.055525 718 22 0.0014493 261 17 0.019284 286 14 0.023920 543 22 0.0061983 344 17 0.0066288 344 17 0.035782 647 19 0.252693 276 17 0.173890 233 17 0.262832 423 16 0.010673 719 22 0.0867420 684 21 0.017494 826 22 0.0188720 597 19 0.012795 321 18 0.195707 878 16 0.0631579 314 11 0.034080 332 17 0.059041 629 19 0.1101821 469 18 0.0923642 731 19 0.0189394 331 15 0.3103838 379 16 0.018292 469 19 0.2395813 0.0034205 0.0063504 0.0184505 0.0164902 0.018408 0.0180295 0.157527 0.2359545 0.0262105 0.0238448 0.016478 0.010254 0.0147670 0.0065211 0.0050714 0.0204155 0.0171766 0.0255880 0.0108704 0.0047681 0.0044923 0.020294 0.0067384 0.0030884 0.052677 0.2232930 0.235071 0.2698007 0.012465 0.0072123 0.024530 0.0256128 0.0256988 0.0897952 0.02787169 0.017160 0.013428 0.1218500 0.0068520 0.0164716 0.3726472 0.0158888 11 0.038262 0.054611 -1.5697e-02 20 0.174697 0.114737 0.05995930 9.9840e-01 7.5738e-01 insignificant 1.000000 1.000000 insignificant 0.9985298 8.4839e-01 insignificant 1 1.000000 insignificant -9.4295e-03 0.77750797 insignificant 1.00000 insignificant 0.038096 0.0286552 0.0081309 19 0.130252 0.0747529 5.5499e-02 2.1321e-01 9.9981e-01 insignificant 8.9585e-01 1.0000e+00 insignificant 2.1980e-01 9.9996e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.4273e-03 9.6568e-01 insignificant 1.0000e+00 insignificant 0.037774 0.0987810 -0.0591284 18 0.092303 0.144098 -0.05179551 9.9999e-01 5.3708e-03 weaklyHypometh 1.0000e+00 0.2776169 insignificant 9.9967e-01 6.2965e-02 insignificant 1.0000e+00 1.000000 insignificant -0.04466288 4.6265e-01 insignificant 1.0000e+00 insignificant 0.054461 0.0286832 0.02921649 19 0.090449 0.0830588 0.0073902 1.2530e-01 9.9976e-01 insignificant 5.4242e-01 1.0000e+00 insignificant 1.4478e-01 9.9999e-01 insignificant 7.3121e-01 1.0000e+00 insignificant 0.01085678 7.8804e-01 insignificant 1.0000e+00 insignificant 0.054330 0.0987810 -4.4368e-02 18 0.084352 0.144098 -5.9747e-02 9.9964e-01 1.5175e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.9082e-01 0.25204121 insignificant 1.0000e+00 1.00000 insignificant -0.03523340 5.8045e-01 insignificant 1.000000 insignificant 0.028376 0.0987810 -0.0744992 17 0.0497035 0.144098 -0.0943947 9.9998e-01 3.3307e-02 weaklyHypometh 1.0000e+00 1.8884e-01 insignificant 1.0000e+00 1.4145e-02 weaklyHypometh 1.0000000 1.2977e-01 insignificant -0.04609017 4.7249e-01 insignificant 1.0000e+00 insignificant chrX 1461823 1462823 57554 IL3RA ENSG00000185291 0.7173469 173 7 0.6694037 138 7 0.518763 111 5 0.7830416 167 5 0.7286946 97 7 0.588359 195 7 0.720843 102 7 0.764985 87 5 0.776670 100 7 0.803247 84 7 0.5643785 163 7 0.6292308 84 6 0.7993590 116 7 0.6600000 38 5 0.7818924 105 7 0.7301587 61 4 0.6978070 70 4 0.7800611 256 5 0.630272 111 5 0.779375 137 5 0.5272727 38 2 0.849614 41 3 0.750688 143 7 0.4793651 50 6 0.4591837 72 4 0.584266 105 5 0.556610 51 4 0.611111 22 2 0.524940 123 7 0.816763 120 5 0.7254386 97 5 0.621336 205 6 0.5610120 163 7 0.725275 72 5 0.463492 63 5 0.6388889 34 2 0.643824 98 5 0.649851 92 7 0.7087615 165 7 0.7249331 158 7 0.7497636 145 7 0.7371161 165 7 0.668869 188 7 0.7942566 0.7530552 0.5371241 0.8238422 0.7131074 0.758750 0.7924246 0.837686 0.7975364 0.8505965 0.7319243 0.704801 0.833069 0.7694433 0.8005591 0.7893493 0.7248076 0.8305173 0.8317521 0.7917476 0.6604579 0.7426878 0.755243 0.7554433 0.7575427 0.768588 0.6705369 0.837094 0.7621455 0.871427 0.7743136 0.781523 0.7726358 0.7831767 0.4707676 0.83290925 0.814165 0.777917 0.8178593 0.7985749 0.7887470 0.7980136 0.7900502 2 0.755741 0.757036 1.2896e-03 5 0.658086 0.550269 0.10781766 2.3657e-01 8.8875e-01 insignificant 1.000000 1.000000 insignificant 0.0588793 9.9191e-01 insignificant 1 1.000000 insignificant 8.0645e-02 0.07327071 lowCoverage 1.00000 lowCoverage 0.755741 0.6775432 0.0323524 5 0.658086 0.5054265 1.5266e-01 3.9807e-01 7.6494e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.3852e-01 8.7524e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.2471e-02 5.6458e-02 insignificant 4.3098e-01 insignificant 0.756485 0.7771011 -0.0102786 7 0.738202 0.720451 0.01775053 3.7422e-01 2.4907e-01 insignificant 1.0000e+00 1.0000000 insignificant 1.2094e-01 2.9700e-01 insignificant 1.0000e+00 1.000000 insignificant -0.01169422 6.2407e-01 insignificant 1.0000e+00 insignificant 0.756326 0.6762452 0.03777376 5 0.504413 0.4633077 0.0411053 7.1546e-01 7.6826e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.6250e-01 5.6119e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 0.01182534 8.2572e-01 lowCoverage 1.0000e+00 lowCoverage 0.760643 0.7771011 -1.3158e-02 5 0.662869 0.720451 -5.7582e-02 6.5644e-01 2.1095e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4363e-01 0.18603455 insignificant 1.0000e+00 1.00000 insignificant -0.09233958 3.8336e-02 lowCoverage 0.798667 lowCoverage 0.689453 0.7771011 -0.0462983 5 0.6949615 0.720451 -0.0254900 2.5959e-01 3.5797e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.5747e-01 3.2116e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.10416492 3.6094e-02 weaklyHypometh 3.0079e-01 insignificant chrX 1559423 1560423 57557 ASMTL ENSG00000169093 0.8274290 633 11 0.7652819 710 13 0.676015 287 10 0.7843347 517 11 0.7997159 205 6 0.784733 948 13 0.691426 429 6 0.716094 327 11 0.680910 312 9 0.587239 232 10 0.8525086 794 10 0.7173416 197 8 0.8720946 264 10 0.8971618 172 6 0.7843019 317 10 0.7243626 167 6 0.4101343 955 4 0.7740479 632 11 0.866269 594 10 0.859422 929 13 0.8895124 194 10 0.758363 49 3 0.807579 525 13 0.6703649 198 10 0.8818182 54 3 0.843458 755 13 0.731058 225 8 0.836719 115 6 0.829354 429 10 0.753007 712 13 0.8185425 713 13 0.806768 884 13 0.6287467 483 12 0.579267 382 10 0.479176 352 10 0.3240741 17 1 0.739378 366 10 0.755820 796 13 0.8170046 994 13 0.8225598 843 13 0.8118103 535 11 0.7730699 795 10 0.756791 607 11 0.9019062 0.8718909 0.8743714 0.9258960 0.9293593 0.887370 0.8674378 0.900754 0.8648941 0.8825870 0.8732102 0.924607 0.905550 0.8716197 0.9049816 0.8460414 0.6969337 0.8891727 0.9131415 0.9392761 0.9118285 0.8698345 0.898512 0.9422899 0.9704370 0.928096 0.8808424 0.905401 0.8753198 0.927785 0.9271358 0.907289 0.7448827 0.8008400 0.6980971 0.66055569 0.793293 0.848349 0.9345637 0.9508548 0.9308187 0.8868360 0.9518132 6 0.863112 0.875129 -2.9406e-02 13 0.684893 0.807314 -0.12242112 9.7280e-01 8.0906e-03 weaklyHypometh 1.000000 0.475915 insignificant 0.9956549 4.3594e-03 weaklyHypometh 1 0.544928 insignificant -4.8671e-02 0.13050203 insignificant 1.00000 insignificant 0.863112 0.7362270 0.1130689 13 0.684893 0.5772764 1.0762e-01 8.1321e-12 9.9971e-01 weaklyHypermeth 1.1959e-10 1.0000e+00 weaklyHypermeth 5.0264e-07 9.9926e-01 weaklyHypermeth 1.2566e-05 1.0000e+00 weaklyHypermeth 1.6913e-01 5.2719e-02 insignificant 4.1841e-01 insignificant 0.863925 0.9048755 -0.0447463 13 0.782339 0.808220 -0.02588095 9.3156e-01 2.8180e-03 weaklyHypometh 1.0000e+00 0.1825549 insignificant 9.6724e-01 3.1461e-04 weaklyHypometh 1.0000e+00 0.044945 weaklyHypometh -0.04270587 1.4824e-01 insignificant 1.0000e+00 insignificant 0.875129 0.7362270 0.14219242 13 0.807314 0.5772764 0.2300379 9.5300e-11 1.0000e+00 weaklyHypermeth 1.5371e-09 1.0000e+00 weaklyHypermeth 6.5682e-08 1.0000e+00 weaklyHypermeth 2.2649e-06 1.0000e+00 weaklyHypermeth 0.21780167 2.1160e-02 weaklyHypermeth 2.0544e-01 insignificant 0.875129 0.9048755 -1.4665e-02 13 0.794900 0.808220 -1.3321e-02 9.2901e-01 6.3898e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3820e-01 0.25752268 insignificant 1.0000e+00 1.00000 insignificant 0.00596493 7.9567e-01 insignificant 1.000000 insignificant 0.736291 0.9048755 -0.1534357 13 0.6335710 0.808220 -0.1746494 1.0000e+00 6.4196e-08 weaklyHypometh 1.0000e+00 1.2345e-06 weaklyHypometh 1.0000e+00 1.6525e-08 weaklyHypometh 1.0000000 1.8361e-06 weaklyHypometh -0.21183674 2.4131e-02 weaklyHypometh 2.4374e-01 insignificant chrX 1583023 1584023 57559 ASMTL ENSG00000169093 0.6579109 256 9 0.6714735 190 8 0.728946 147 8 0.8534969 155 9 0.8252898 96 8 0.796480 346 10 0.852774 212 8 0.788353 209 8 0.819368 102 8 0.790254 108 8 0.7711381 310 8 0.8213821 112 8 0.8711695 139 8 0.8125000 38 4 0.8307179 158 8 0.7877473 74 7 0.6197407 395 7 0.7172457 181 9 0.834222 185 9 0.809644 258 8 0.7876836 64 7 0.872001 89 7 0.790266 205 7 0.7197726 69 5 0.8276989 66 5 0.671924 272 10 0.832812 76 5 0.876884 68 5 0.808814 119 7 0.715004 241 10 0.7782737 254 10 0.715640 364 10 0.6700880 153 8 0.724912 134 7 0.556283 317 10 0.8410942 72 5 0.780950 123 6 0.737920 252 10 0.7665543 247 10 0.8380504 276 10 0.8022030 231 9 0.7279357 237 7 0.767784 237 9 0.7737844 0.7261688 0.7802195 0.9353257 0.8511136 0.857655 0.8500642 0.824760 0.8333936 0.8032274 0.8467656 0.852439 0.865567 0.8271040 0.8272586 0.7972272 0.7422915 0.8216622 0.8504574 0.8813472 0.7996691 0.8831511 0.890175 0.6757003 0.8020330 0.846321 0.8376582 0.784067 0.8262467 0.853326 0.8406490 0.809640 0.7317291 0.7336745 0.6866306 0.90431522 0.797366 0.854511 0.8654398 0.9152586 0.8571092 0.8102193 0.9452512 5 0.808227 0.805098 1.3435e-02 8 0.769695 0.786594 -0.01689886 1.1430e-01 7.9542e-01 insignificant 1.000000 1.000000 insignificant 0.4279732 4.7823e-01 insignificant 1 1.000000 insignificant -7.1983e-05 0.99767800 insignificant 1.00000 insignificant 0.808122 0.7155090 0.0939497 8 0.748758 0.6399803 1.0878e-01 1.7053e-09 9.4318e-01 weaklyHypermeth 2.0546e-08 1.0000e+00 weaklyHypermeth 1.2686e-02 9.5243e-01 weaklyHypermeth 9.6843e-02 1.0000e+00 weaklyHypermeth 6.4451e-02 1.7939e-01 insignificant 1.0000e+00 insignificant 0.808122 0.8557457 -0.0512627 10 0.748758 0.738846 0.00991265 9.6272e-01 1.7667e-03 weaklyHypometh 1.0000e+00 0.1472255 insignificant 9.8098e-01 8.7998e-04 weaklyHypometh 1.0000e+00 0.087998 weaklyHypometh 0.00248717 9.2003e-01 insignificant 1.0000e+00 insignificant 0.804683 0.7155090 0.07501326 8 0.767193 0.6399803 0.1272130 8.3014e-05 9.8576e-01 weaklyHypermeth 7.0953e-04 1.0000e+00 weaklyHypermeth 3.4011e-02 9.2549e-01 weaklyHypermeth 2.2398e-01 1.0000e+00 insignificant 0.06452348 1.8644e-01 insignificant 1.0000e+00 insignificant 0.804359 0.8558632 -6.4040e-02 8 0.744927 0.760608 -1.5681e-02 9.9795e-01 2.1031e-03 weaklyHypometh 1.0000e+00 1.7526e-01 insignificant 9.9612e-01 0.06468565 insignificant 1.0000e+00 1.00000 insignificant 0.00255915 9.2480e-01 insignificant 1.000000 insignificant 0.715509 0.8557457 -0.1348630 8 0.6399803 0.738846 -0.0988652 9.9375e-01 8.4184e-05 weaklyHypometh 1.0000e+00 1.0393e-03 weaklyHypometh 9.9570e-01 1.0480e-02 weaklyHypometh 1.0000000 1.0376e-01 insignificant -0.06196433 2.0294e-01 insignificant 9.6178e-01 insignificant chrX 1600823 1601823 57560 ASMTL ENSG00000169093 0.9548611 109 2 0.6613072 158 8 0.812500 33 2 0.7928571 56 3 0.5553719 58 8 0.686774 259 8 0.541865 63 7 0.720118 106 8 0.663929 52 7 0.805710 70 7 0.7334163 197 9 0.4444444 44 7 0.7784054 93 7 0.8750000 44 7 0.7093750 45 7 1.0000000 13 0 0.6589716 301 5 0.8393519 51 2 0.691486 77 7 0.865258 171 3 0.4586112 69 6 0.812500 25 0 0.824653 64 3 0.7546296 49 3 0.6887566 50 8 0.807036 146 10 0.820580 85 8 0.591667 29 0 0.875000 52 2 0.747564 121 8 0.7043290 108 8 0.861535 225 8 0.7260520 107 8 0.714286 50 2 0.686868 213 8 0.7142857 31 5 0.710403 67 8 0.698603 105 8 0.8808478 111 8 0.7348333 202 8 0.6819109 48 5 0.9591837 17 2 0.839286 75 7 0.9797980 0.7727151 0.7727273 0.7218615 0.6520317 0.788167 0.6300956 0.786272 0.8084686 0.8249787 0.7090232 0.528409 0.775350 0.8750000 0.6704545 1.0000000 0.7344381 0.9416667 0.7571724 0.8269846 0.5409815 0.7876092 0.788310 0.7225379 0.7843895 0.764977 0.8805995 0.782197 0.8579545 0.729411 0.7354880 0.855415 0.6877347 0.7386364 0.8551885 0.75000000 0.798243 0.688759 0.8711682 0.8084632 0.7123672 0.9480519 0.8376623 0 0.804304 0.839530 -9.0354e-05 7 0.575342 0.645260 -0.06991758 9.6273e-01 2.9353e-01 insignificant 1.000000 1.000000 insignificant 0.9780023 7.1699e-01 insignificant 1 1.000000 insignificant -6.0216e-03 0.89798311 insignificant 1.00000 insignificant 0.806727 0.7399651 0.0420869 8 0.679950 0.6915903 -1.1640e-02 1.0803e-02 4.8837e-01 weaklyHypermeth 6.0352e-02 1.0000e+00 weaklyHypermeth 1.3623e-01 7.0260e-01 insignificant 7.2461e-01 1.0000e+00 insignificant 3.1134e-02 3.2966e-01 insignificant 1.0000e+00 insignificant 0.807944 0.8962472 -0.0431854 7 0.747945 0.752825 -0.00488022 9.2858e-01 1.0395e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.6820e-01 1.1162e-01 insignificant 1.0000e+00 1.000000 insignificant -0.07966219 2.1379e-01 insignificant 1.0000e+00 insignificant 0.844488 0.7399651 0.06794871 7 0.762580 0.6915903 0.0709895 1.8097e-02 6.7206e-01 weaklyHypermeth 9.5749e-02 1.0000e+00 weaklyHypermeth 1.5583e-01 8.8729e-01 insignificant 7.7914e-01 1.0000e+00 insignificant 0.03715550 3.1553e-01 insignificant 1.0000e+00 insignificant 0.845850 0.8962472 -4.6245e-02 7 0.788838 0.752825 3.6013e-02 4.6622e-01 9.5361e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3465e-01 0.21375590 insignificant 1.0000e+00 1.00000 insignificant -0.07364058 2.6050e-01 insignificant 1.000000 insignificant 0.740806 0.8962472 -0.0832652 7 0.7107493 0.752825 -0.0420759 9.9463e-01 3.8031e-02 weaklyHypometh 1.0000e+00 2.0896e-01 insignificant 9.8723e-01 3.2566e-02 weaklyHypometh 1.0000000 2.3771e-01 insignificant -0.11079608 9.0237e-02 insignificant 5.7476e-01 insignificant chrX 2634889 2635889 57577 CD99 ENSG00000002586 0.5312321 177 8 0.5201257 297 11 0.474074 79 7 0.5383349 204 7 0.5598765 84 8 0.533748 204 10 0.558850 90 10 0.580557 105 7 0.575525 65 5 0.527350 47 7 0.6031517 277 12 0.8055556 16 1 0.5134310 83 7 0.5882353 62 7 0.6134259 64 7 0.5625000 14 0 0.7333333 9 0 0.5119602 215 7 0.553335 119 6 0.603456 125 4 0.6253968 120 7 0.222222 35 1 0.484136 90 4 0.6464286 76 7 0.5549468 116 7 0.524234 212 9 0.472363 158 8 0.411884 92 8 0.550096 130 8 0.583727 261 10 0.5033489 242 13 0.532982 184 10 0.2919025 174 10 0.254690 150 7 0.534100 411 9 0.4000000 45 3 0.347773 138 8 0.302772 253 13 0.5667943 170 8 0.5777691 244 11 0.5596897 247 10 0.4329412 229 4 0.566884 234 13 0.5903524 0.4235712 0.4181883 0.5569432 0.5415622 0.568038 0.5356716 0.590545 0.4992204 0.6774366 0.6379360 0.653300 0.435140 0.5871296 0.5136452 0.3195489 0.5472201 0.4571481 0.5426065 0.5556027 0.5474400 0.3107769 0.616460 0.5775152 0.5059936 0.550547 0.4069838 0.342642 0.5311832 0.535759 0.5865150 0.561343 0.2379908 0.2215061 0.3326173 0.30275417 0.188758 0.280025 0.4281683 0.5415003 0.4513223 0.3989385 0.4579514 1 0.535531 0.510787 1.8175e-02 7 0.476198 0.545838 -0.06964005 7.4685e-01 6.5165e-01 insignificant 1.000000 1.000000 insignificant 0.6665426 9.5138e-01 insignificant 1 1.000000 insignificant 6.5089e-02 0.09119016 insignificant 1.00000 insignificant 0.535531 0.3185312 0.2306334 8 0.476198 0.3623208 1.1388e-01 1.9833e-11 8.6310e-01 hypermethylated 2.7934e-10 1.0000e+00 hypermethylated 3.1479e-06 9.9999e-01 hypermethylated 6.5581e-05 1.0000e+00 hypermethylated 2.1920e-01 1.8633e-03 weaklyHypermeth 2.5524e-02 weaklyHypermeth 0.537430 0.4665477 0.0743124 8 0.550193 0.537018 0.01317477 2.6150e-01 7.0371e-01 insignificant 1.0000e+00 1.0000000 insignificant 2.1684e-01 9.3979e-01 insignificant 1.0000e+00 1.000000 insignificant 0.03358734 3.2705e-01 insignificant 1.0000e+00 insignificant 0.510787 0.3185312 0.17165395 8 0.545838 0.3623208 0.1835170 4.8103e-08 7.4708e-01 weaklyHypermeth 6.3293e-07 1.0000e+00 weaklyHypermeth 1.5773e-04 9.9907e-01 weaklyHypermeth 2.4646e-03 1.0000e+00 weaklyHypermeth 0.15410754 1.3139e-02 weaklyHypermeth 1.4763e-01 insignificant 0.512353 0.4670232 5.1402e-02 8 0.473220 0.570088 -9.6869e-02 1.6320e-01 5.8843e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.4999e-01 0.55946089 insignificant 1.0000e+00 1.00000 insignificant -0.03150180 4.6665e-01 insignificant 1.000000 insignificant 0.318103 0.4665477 -0.1345964 9 0.3478287 0.537018 -0.1891896 6.6379e-01 3.5177e-11 weaklyHypometh 1.0000e+00 1.1348e-09 weaklyHypometh 9.9072e-01 3.8674e-06 weaklyHypometh 1.0000000 1.6114e-04 weaklyHypometh -0.18560934 5.1435e-03 weaklyHypometh 7.1437e-02 weaklyHypometh chrX 2732989 2733989 57582 XG ENSG00000124343 0.1849176 118 5 0.3192624 121 5 0.291238 134 5 0.2505376 39 1 0.1697695 85 5 0.460323 50 4 0.153733 137 5 0.269505 126 5 0.113274 116 5 0.179710 117 5 0.4723850 259 5 0.2845652 52 4 0.0761206 202 5 0.2250000 22 1 0.1565173 146 5 0.3992593 51 4 0.4776133 64 5 0.3461538 32 1 0.096262 152 5 0.080777 153 5 0.3035714 51 5 0.279487 22 1 0.564960 66 4 0.1557692 80 4 0.0454545 14 1 0.101417 183 5 0.092424 92 5 0.051961 54 5 0.251468 134 5 0.087024 169 5 0.0607184 239 5 0.130240 189 5 0.2950000 82 5 0.601667 112 4 0.482022 168 4 0.2809524 27 3 0.516092 37 1 0.241940 143 5 0.2476190 90 5 0.3294500 73 4 0.1928571 77 4 0.3926374 67 4 0.305882 40 1 0.1636884 0.3421172 0.2742246 0.3542468 0.2208930 0.466218 0.2285708 0.361553 0.1959264 0.2522537 0.4565094 0.318957 0.066708 NA 0.1707444 0.3126572 0.5887891 0.3244735 0.1145957 0.0785752 0.4849934 0.2738179 0.431398 0.2578952 0.1295907 0.107806 0.0705796 0.129655 0.2228837 0.090056 0.0570412 0.204953 0.2724771 0.5116208 0.5219932 0.30974225 0.483550 0.283320 0.2276103 0.3291543 0.1389253 0.3736919 0.4692391 1 0.244363 0.152832 9.3515e-02 5 0.233071 0.150666 0.08240491 2.5554e-03 9.9961e-01 weaklyHypermeth 0.638853 1.000000 insignificant 0.0079916 9.9950e-01 weaklyHypermeth 1 1.000000 insignificant 7.3305e-02 0.17764053 lowCoverage 1.00000 lowCoverage 0.244363 0.4182777 -0.1782173 4 0.233071 0.3905702 -1.5750e-01 9.9827e-01 1.0645e-05 lowCoverage 1.0000e+00 2.1289e-03 lowCoverage 9.9681e-01 2.3746e-03 lowCoverage 1.0000e+00 3.3923e-01 lowCoverage -1.5260e-01 5.5826e-02 lowCoverage 4.2943e-01 lowCoverage 0.244363 0.3054755 -0.0530965 4 0.233071 0.299283 -0.06621185 8.6013e-01 4.6124e-03 lowCoverage 1.0000e+00 0.2658801 lowCoverage 6.1030e-01 4.8378e-02 lowCoverage 1.0000e+00 0.912799 lowCoverage -0.04334303 3.5613e-01 lowCoverage 1.0000e+00 lowCoverage 0.152832 0.4182777 -0.27222882 4 0.150666 0.3905702 -0.2399043 9.9993e-01 6.0511e-09 lowCoverage 1.0000e+00 1.5128e-06 lowCoverage 9.9998e-01 6.0637e-05 lowCoverage 1.0000e+00 1.5159e-02 lowCoverage -0.22590429 1.2650e-02 lowCoverage 1.4376e-01 lowCoverage 0.152832 0.3054755 -1.5283e-01 4 0.150666 0.299283 -1.4862e-01 9.9335e-01 6.7410e-06 lowCoverage 1.0000e+00 2.2470e-03 lowCoverage 9.1573e-01 0.02090556 lowCoverage 1.0000e+00 1.00000 lowCoverage -0.11664795 5.4374e-02 lowCoverage 0.921588 lowCoverage 0.418278 0.3054755 0.1006701 4 0.3905702 0.299283 0.0912876 8.5620e-02 9.8694e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 2.0335e-01 9.8543e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage 0.10925635 1.5770e-01 lowCoverage 8.0457e-01 lowCoverage chrX 2825389 2826389 57589 GYG2 ENSG00000056998 0.2370427 203 6 0.1787871 186 6 0.188720 172 6 0.2159091 83 4 0.3109575 97 6 0.497449 195 3 0.247222 228 6 0.224423 100 4 0.153018 113 5 0.101627 106 4 0.2663418 282 6 0.0998037 54 4 0.2269669 130 4 0.5397059 29 3 0.2291193 79 4 0.1736842 49 4 0.3486111 35 3 0.3957831 92 1 0.074357 273 4 0.125992 198 5 0.1928772 53 3 1.000000 1 0 0.453231 87 5 0.1624542 106 5 0.3333333 13 1 0.106753 225 6 0.257937 117 5 0.295370 82 5 0.155612 252 4 0.411304 143 5 0.1415598 214 5 0.239185 227 6 0.0968045 114 6 0.116239 115 5 0.000000 236 5 0.0000000 4 0 0.112369 106 5 0.057336 200 6 0.2521289 192 4 0.4191756 141 4 0.3125000 176 4 0.1219219 191 1 0.369905 102 3 0.1267643 0.0991089 0.0661832 0.2356230 0.0706700 0.200173 0.0540998 0.271247 0.0659242 0.0211829 0.1570122 0.050673 0.027057 0.2677689 0.1942999 0.1032824 0.1469618 0.4410222 0.0133690 0.0384025 0.1787070 0.3218553 0.251838 0.1146402 0.0040331 0.099055 0.0071685 0.172984 0.0272987 0.122657 0.0152330 0.069632 0.0515856 0.0213400 0.0000000 0.00322581 0.093388 0.066411 0.1393435 0.2566771 0.0161290 0.0332461 0.3326705 1 0.159024 0.090250 4.2056e-02 5 0.231416 0.365232 -0.13381620 4.7699e-02 9.9988e-01 weaklyHypermeth 1.000000 1.000000 insignificant 0.3366447 8.5274e-01 insignificant 1 1.000000 insignificant -7.0692e-02 0.36276731 lowCoverage 1.00000 lowCoverage 0.159141 0.0490323 0.0878602 5 0.289270 0.0601257 2.2914e-01 2.2398e-08 9.8304e-01 weaklyHypermeth 2.5452e-07 1.0000e+00 weaklyHypermeth 2.5872e-05 9.9870e-01 weaklyHypermeth 4.2412e-04 1.0000e+00 weaklyHypermeth 1.7798e-01 6.3345e-05 lowCoverage 1.6242e-03 lowCoverage 0.159083 0.1348315 -0.0263378 3 0.257129 0.386207 -0.12907836 9.2539e-01 3.4365e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage 9.5350e-01 3.3455e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage -0.05335036 3.9495e-01 lowCoverage 1.0000e+00 lowCoverage 0.087244 0.0490323 0.03814646 5 0.206540 0.0601257 0.1464148 1.9498e-03 9.4261e-01 weaklyHypermeth 1.2580e-02 1.0000e+00 weaklyHypermeth 7.7931e-03 9.9350e-01 weaklyHypermeth 6.4406e-02 1.0000e+00 weaklyHypermeth 0.24867665 4.7781e-03 lowCoverage 6.1258e-02 lowCoverage 0.088449 0.1359102 -6.5703e-02 3 0.365232 0.447587 -8.2354e-02 9.9873e-01 1.0825e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 9.9730e-01 0.34460447 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.01734164 8.4446e-01 lowCoverage 1.000000 lowCoverage 0.049032 0.1337500 -0.0953096 4 0.0601257 0.309483 -0.2493577 9.9325e-01 2.9348e-04 lowCoverage 1.0000e+00 3.0255e-03 lowCoverage 9.9990e-01 3.5522e-02 lowCoverage 1.0000000 2.5442e-01 lowCoverage -0.23133501 7.6033e-03 lowCoverage 9.6244e-02 lowCoverage chrX 9270414 9271414 57632 ENSG00000219308 0.1021958 451 16 0.0147059 214 14 0.011161 382 16 0.0339674 302 12 0.2424242 128 4 0.083321 382 16 0.010131 453 16 0.142637 271 16 0.091580 273 16 0.013882 373 16 0.0439083 222 13 0.0000000 155 16 0.0076790 540 16 0.0000000 80 10 0.0196658 226 16 0.0208333 27 3 0.0025000 190 16 0.0794045 298 12 0.085868 229 13 0.290220 449 16 0.0156250 73 7 0.060606 295 13 0.022772 195 16 0.2595686 143 11 0.4760461 187 10 0.080222 480 16 0.173149 185 12 0.033333 74 7 0.244177 199 16 0.024067 239 16 0.0078914 343 16 0.018740 456 16 0.0104167 143 16 0.160150 278 16 0.250000 41 3 0.0000000 90 6 0.031373 74 4 0.022281 287 16 0.0568617 483 16 0.0078125 303 16 0.0014205 421 12 0.0693290 282 12 0.009094 297 12 0.0796476 0.0044326 0.0027440 0.0165742 0.2807574 0.033638 0.0078932 0.173299 0.1390105 0.0108747 0.0606564 0.000000 0.011258 0.0042594 0.0239979 0.0603381 0.0058156 0.0208437 0.0971375 0.3411320 0.0088652 0.0044058 0.024168 0.3177680 0.3265350 0.079565 0.2335140 0.012810 0.3532460 0.010881 0.0026864 0.013619 0.0065012 0.1353051 0.1857429 0.00000000 0.013712 0.023336 0.0507995 0.0044326 0.0033043 0.0890696 0.0115858 4 0.057927 0.095504 -3.7210e-02 16 0.070964 0.142183 -0.07121883 9.9813e-01 1.4288e-03 weaklyHypometh 1.000000 0.204118 insignificant 0.9992659 3.3124e-02 weaklyHypometh 1 1.000000 insignificant -5.3212e-02 0.25942080 insignificant 1.00000 insignificant 0.057927 0.0766703 -0.0180351 16 0.070964 0.0767319 -5.7679e-03 5.4763e-01 1.1588e-02 weaklyHypometh 1.0000e+00 6.4036e-01 insignificant 8.4652e-02 9.8813e-01 insignificant 4.8944e-01 1.0000e+00 insignificant -1.4233e-02 7.6338e-01 insignificant 1.0000e+00 insignificant 0.057927 0.0251960 0.0291939 16 0.070964 0.029145 0.04181881 1.0471e-01 9.9834e-01 insignificant 1.0000e+00 1.0000000 insignificant 3.5340e-01 9.4154e-01 insignificant 1.0000e+00 1.000000 insignificant 0.03590069 1.3493e-01 insignificant 1.0000e+00 insignificant 0.095504 0.0766703 0.01616231 16 0.142183 0.0767319 0.0654510 3.8967e-01 8.4570e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.6879e-02 9.9999e-01 weaklyHypermeth 1.2411e-01 1.0000e+00 insignificant 0.03897964 5.1969e-01 insignificant 1.0000e+00 insignificant 0.095504 0.0251960 6.5974e-02 16 0.142183 0.029145 1.1304e-01 2.5156e-02 9.9990e-01 weaklyHypermeth 3.6994e-01 1.0000e+00 insignificant 7.5079e-02 0.99832593 insignificant 1.0000e+00 1.00000 insignificant 0.08911296 6.3705e-02 insignificant 1.000000 insignificant 0.076670 0.0251960 0.0440645 16 0.0767319 0.029145 0.0475867 1.1112e-01 6.8165e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.2776e-01 3.7974e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.05013333 2.9791e-01 insignificant 1.0000e+00 insignificant chrX 13124914 13125914 57767 FAM9C ENSG00000187268 0.7231884 106 6 0.6642385 69 6 0.558673 41 6 0.7599176 97 6 0.7214286 29 2 0.694036 222 6 0.611111 52 6 0.665404 88 6 0.645833 48 6 0.428571 44 6 0.7571503 182 6 0.7500000 22 0 0.7431891 74 6 0.8416667 26 2 0.7166667 43 6 0.8333333 12 0 0.6666667 8 0 0.7919841 125 6 0.825758 56 2 0.801997 114 6 0.7880952 43 4 0.541667 32 2 0.793803 45 3 0.8611111 24 2 0.7861111 25 2 0.755844 122 6 0.866667 42 4 0.700000 10 1 0.655357 93 6 0.833699 113 6 0.6414753 105 6 0.844164 187 6 0.7068452 86 6 0.681548 45 6 0.554196 73 6 0.7083333 23 0 0.727183 50 6 0.658928 129 6 0.6696429 62 6 0.7019808 96 6 0.7507101 109 6 0.7291667 30 2 0.778002 121 6 0.7477675 0.6564597 0.6416546 0.7781166 0.8560606 0.719503 0.8305275 0.691996 0.6742424 0.6233766 0.7773326 0.775253 0.830420 0.8535354 0.7474747 0.8383838 0.7373737 0.8082371 0.8523110 0.8060197 0.7760943 0.6060606 0.808987 0.8787879 0.8069024 0.733395 0.8417508 0.733301 0.7224627 0.801258 0.6635563 0.817376 0.7048160 0.7258297 0.6111464 0.72727273 0.748918 0.674382 0.7106782 0.8429675 0.7636997 0.8097643 0.7392380 0 0.748971 0.765755 -1.0609e-02 6 0.586834 0.791000 -0.20416551 9.0877e-01 9.4866e-03 weaklyHypometh 1.000000 0.499295 insignificant 0.8509357 5.1602e-02 insignificant 1 1.000000 insignificant -4.5625e-02 0.22800086 lowCoverage 1.00000 lowCoverage 0.748971 0.6748768 0.0679110 6 0.586834 0.6267448 -3.9911e-02 1.5601e-02 9.9931e-01 weaklyHypermeth 8.2986e-02 1.0000e+00 weaklyHypermeth 8.4733e-02 9.1258e-01 insignificant 4.8944e-01 1.0000e+00 insignificant 3.7202e-02 2.9383e-01 lowCoverage 1.0000e+00 lowCoverage 0.748971 0.7631579 -0.0194316 6 0.586834 0.711449 -0.12461464 9.1300e-01 5.1776e-02 insignificant 1.0000e+00 0.7562839 insignificant 8.6458e-01 1.0184e-01 insignificant 1.0000e+00 1.000000 insignificant -0.01585968 5.9521e-01 lowCoverage 1.0000e+00 lowCoverage 0.765755 0.6748768 0.07943971 6 0.791000 0.6267448 0.1642549 3.8951e-02 9.9905e-01 weaklyHypermeth 1.9188e-01 1.0000e+00 insignificant 3.9683e-02 9.9930e-01 weaklyHypermeth 2.5116e-01 1.0000e+00 insignificant 0.08282745 5.0152e-02 lowCoverage 3.9803e-01 lowCoverage 0.765755 0.7631579 -8.2851e-03 6 0.791000 0.711449 7.9551e-02 4.9298e-01 3.8981e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 5.2453e-01 0.67219837 insignificant 1.0000e+00 1.00000 insignificant 0.02976574 4.0536e-01 lowCoverage 1.000000 lowCoverage 0.674877 0.7631579 -0.0867941 6 0.6267448 0.711449 -0.0847040 9.9345e-01 1.1576e-02 weaklyHypometh 1.0000e+00 7.6156e-02 weaklyHypometh 9.9407e-01 7.9870e-02 insignificant 1.0000000 4.9302e-01 insignificant -0.05306171 1.3073e-01 insignificant 7.0797e-01 insignificant chrX 16583314 16584314 57837 S100G ENSG00000169906 0.9129630 137 5 0.7106394 138 5 0.607143 59 5 0.8984115 105 4 0.7653616 60 5 0.877063 117 5 0.842687 40 5 0.813910 74 5 0.790179 36 4 0.670635 28 4 0.8369872 193 6 0.6700000 24 3 0.7687075 43 5 0.7000000 29 3 0.5648148 22 1 0.7629630 27 3 0.9861224 511 3 0.9876543 42 2 0.810159 64 5 0.816905 105 5 0.6571429 20 3 0.714286 9 0 0.719444 58 3 0.8200000 24 3 0.9495614 76 4 0.682549 161 5 0.922449 24 3 0.793333 13 1 0.808508 71 5 0.839934 109 5 0.8728526 147 5 0.754302 104 5 0.5392609 83 5 0.791075 89 5 0.651681 156 5 0.8095238 19 3 0.678571 53 5 0.781061 94 5 0.7927539 178 5 0.7580688 112 5 0.9395283 228 5 0.9923077 32 1 0.762416 147 5 0.8940797 0.7631876 0.8066378 0.9035146 0.8325319 0.863085 0.8331530 0.823764 0.7646104 0.8445166 0.8694538 0.715909 0.718975 0.8787879 0.7205387 0.8481512 0.9743489 0.9652076 0.8553391 0.8556097 0.7363636 0.9242424 0.766625 0.8636364 0.9374003 0.871257 0.7904762 0.779798 0.8687045 0.858212 0.8644175 0.805137 0.7361607 0.7536060 0.8214048 0.94247276 0.752706 0.803375 0.8758322 0.8205067 0.9438346 0.9819347 0.9481686 1 0.878591 0.852941 4.8959e-02 5 0.811274 0.709208 0.10206592 4.4596e-02 9.5357e-01 weaklyHypermeth 1.000000 1.000000 insignificant 0.7184107 4.3433e-01 insignificant 1 1.000000 insignificant -4.8650e-03 0.89632216 lowCoverage 1.00000 lowCoverage 0.877970 0.7773279 0.1260459 5 0.829792 0.6877514 1.4204e-01 3.5647e-04 9.8906e-01 weaklyHypermeth 2.5333e-03 1.0000e+00 weaklyHypermeth 2.2861e-01 9.7248e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.1136e-02 1.3861e-01 lowCoverage 8.8287e-01 lowCoverage 0.877562 0.9210904 -0.0119691 5 0.796813 0.746218 0.05059507 5.5219e-01 7.6461e-01 insignificant 1.0000e+00 1.0000000 insignificant 8.8388e-01 4.3556e-01 insignificant 1.0000e+00 1.000000 insignificant -0.05934970 3.2033e-01 lowCoverage 1.0000e+00 lowCoverage 0.853988 0.7820774 0.04753788 5 0.797859 0.7737204 0.0241383 4.2753e-02 8.5571e-01 weaklyHypermeth 2.0654e-01 1.0000e+00 insignificant 1.9872e-01 8.4275e-01 insignificant 9.4631e-01 1.0000e+00 insignificant 0.08600141 1.2270e-01 lowCoverage 7.4824e-01 lowCoverage 0.852941 0.9223022 -5.8872e-02 5 0.709208 0.773575 -6.4368e-02 9.8610e-01 2.5820e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.8930e-01 0.40034255 insignificant 1.0000e+00 1.00000 insignificant -0.05448465 3.6249e-01 lowCoverage 1.000000 lowCoverage 0.777328 0.9209770 -0.1256997 5 0.6877514 0.718020 -0.0302684 9.9992e-01 5.0228e-03 weaklyHypometh 1.0000e+00 3.7073e-02 weaklyHypometh 9.9733e-01 1.6712e-01 insignificant 1.0000000 8.4403e-01 insignificant -0.14048606 6.0520e-02 lowCoverage 4.2322e-01 lowCoverage chrX 16723814 16724814 57839 CXorf15 ENSG00000086712 0.6131675 297 8 0.5610133 157 8 0.616941 139 9 0.6444338 181 8 0.6371032 95 8 0.700601 350 9 0.602240 126 8 0.709991 167 8 0.638357 124 8 0.610475 115 6 0.6746154 309 8 0.4523591 64 5 0.6908792 169 8 0.8000000 19 2 0.6024691 107 7 0.3809524 47 3 0.6321734 64 5 0.5825943 169 9 0.718647 180 8 0.674760 295 8 0.6117216 60 7 0.738352 65 5 0.566085 135 8 0.7640977 83 6 0.7380579 72 7 0.675087 238 8 0.766712 118 7 0.706349 49 3 0.638119 137 7 0.634535 249 8 0.6433671 256 9 0.629982 317 9 0.5350158 168 8 0.566209 110 8 0.747075 302 8 0.7142857 48 4 0.586162 104 8 0.566664 226 8 0.6249360 240 9 0.7236427 186 8 0.6349741 248 8 0.6416358 245 8 0.592888 167 8 0.6660067 0.6044292 0.6740281 0.7120042 0.7506113 0.717876 0.6688488 0.699503 0.6610394 0.6554350 0.6931857 0.534402 0.712527 0.7465477 0.7006006 0.5846320 0.6595690 0.6745551 0.6937058 0.6861356 0.6440946 0.7213759 0.634117 0.7832969 0.8135174 0.727204 0.7648500 0.770592 0.7060060 0.712417 0.7199008 0.699721 0.5963838 0.5425783 0.6997662 0.71877704 0.690240 0.638555 0.6629885 0.6938333 0.6891081 0.7185301 0.6667091 4 0.655640 0.699269 -2.6393e-02 8 0.632728 0.643105 -0.01037760 8.6898e-01 2.8589e-02 weaklyHypometh 1.000000 0.817742 insignificant 0.8957552 3.2690e-02 weaklyHypometh 1 1.000000 insignificant -4.8850e-02 0.09008178 insignificant 1.00000 insignificant 0.655640 0.6847599 0.0351784 8 0.632728 0.5942093 3.8518e-02 2.3683e-03 5.7509e-01 weaklyHypermeth 1.4529e-02 1.0000e+00 weaklyHypermeth 2.8773e-02 8.8925e-01 weaklyHypermeth 1.9370e-01 1.0000e+00 insignificant 7.9532e-03 8.5256e-01 insignificant 1.0000e+00 insignificant 0.655640 0.6740331 -0.0083666 8 0.632728 0.636171 -0.00344342 5.0083e-01 2.5185e-01 insignificant 1.0000e+00 1.0000000 insignificant 4.4300e-01 5.3612e-01 insignificant 1.0000e+00 1.000000 insignificant -0.01642673 5.9151e-01 insignificant 1.0000e+00 insignificant 0.699269 0.6847599 0.06166357 8 0.643105 0.5942093 0.0488960 3.1880e-05 9.7285e-01 weaklyHypermeth 2.9794e-04 1.0000e+00 weaklyHypermeth 2.3907e-03 9.9339e-01 weaklyHypermeth 2.3402e-02 1.0000e+00 weaklyHypermeth 0.05680354 2.0174e-01 insignificant 1.0000e+00 insignificant 0.699269 0.6740331 1.4101e-02 8 0.643105 0.636171 6.9342e-03 2.1679e-01 6.4605e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 7.7196e-02 0.71759357 insignificant 1.0000e+00 1.00000 insignificant 0.03242357 2.8549e-01 insignificant 1.000000 insignificant 0.684760 0.6740331 -0.0437377 8 0.5942093 0.636171 -0.0419618 5.8501e-01 9.1531e-04 weaklyHypometh 1.0000e+00 8.3973e-03 weaklyHypometh 9.2116e-01 4.7222e-02 weaklyHypometh 1.0000000 3.0864e-01 insignificant -0.02437997 5.7880e-01 insignificant 1.0000e+00 insignificant chrX 16754514 16755514 57843 ENSG00000216596 0.7665801 146 5 0.7039855 93 4 0.523377 36 4 0.6218954 128 5 0.7444780 62 5 0.687500 65 4 0.810000 35 3 0.551758 41 5 0.640152 44 4 0.796970 44 5 0.6431823 108 5 0.7111111 25 4 0.7234921 68 5 0.7214286 50 5 0.6538462 38 2 0.7884615 26 1 0.6666667 27 1 0.6716507 169 5 0.676768 42 4 0.715714 72 4 0.7600000 18 3 1.000000 4 0 0.752273 65 5 0.7968254 28 3 0.7647059 53 3 0.850000 44 5 0.875000 9 0 1.000000 3 0 0.778571 78 4 0.600000 43 4 0.6815115 61 4 0.628081 70 5 0.6639141 85 5 0.718889 46 5 0.542929 56 4 0.7333333 12 0 0.668811 54 5 0.676374 58 4 0.7803922 65 5 0.6866667 94 5 0.6569811 76 5 0.7819398 84 4 0.751092 119 5 0.7106898 0.6812179 0.5359238 0.6611058 0.7298276 0.677419 0.7903226 0.446562 0.6554863 0.8294233 0.5997326 0.693190 0.650026 0.7030850 0.5781638 0.7655087 NA 0.6833005 0.6552685 0.6509217 0.6903226 0.9757696 0.736804 0.7378392 0.7510055 0.850806 0.8467373 0.973454 0.7776498 0.661290 0.6569370 0.619746 0.6157360 0.7146057 0.5818263 0.65591398 0.630724 0.647510 0.7719798 0.7113978 0.7093151 0.7648074 0.6968013 0 0.673237 0.724790 -5.0945e-02 4 0.693728 0.735299 -0.04157121 9.5151e-01 7.9676e-03 lowCoverage 1.000000 0.475915 lowCoverage 0.9951671 3.1304e-04 lowCoverage 1 0.104347 lowCoverage -9.9630e-02 0.02493448 lowCoverage 1.00000 lowCoverage 0.673237 0.6559486 0.0367395 5 0.693728 0.6618462 3.1882e-02 9.3358e-02 9.4539e-01 insignificant 4.3022e-01 1.0000e+00 insignificant 1.5401e-01 8.7479e-01 insignificant 7.9796e-01 1.0000e+00 insignificant 2.3576e-02 4.8168e-01 lowCoverage 1.0000e+00 lowCoverage 0.673237 0.7146119 -0.0495191 5 0.693728 0.729468 -0.03573988 9.2259e-01 1.2513e-01 insignificant 1.0000e+00 1.0000000 insignificant 8.9550e-01 2.2055e-01 insignificant 1.0000e+00 1.000000 insignificant -0.04046362 2.2017e-01 lowCoverage 1.0000e+00 lowCoverage 0.724790 0.6559486 0.08711466 4 0.735299 0.6618462 0.0734529 1.0085e-04 9.6181e-01 lowCoverage 8.3348e-04 1.0000e+00 lowCoverage 3.4300e-04 9.8713e-01 lowCoverage 4.9710e-03 1.0000e+00 lowCoverage 0.12320556 1.6005e-02 lowCoverage 1.6005e-01 lowCoverage 0.724790 0.7146119 1.1782e-04 4 0.735299 0.729468 5.8313e-03 2.6031e-01 6.5295e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 7.9420e-02 0.91015209 lowCoverage 1.0000e+00 1.00000 lowCoverage 0.05916621 2.0377e-01 lowCoverage 1.000000 lowCoverage 0.655949 0.7146119 -0.0806419 5 0.6618462 0.729468 -0.0676215 9.8003e-01 2.3349e-03 weaklyHypometh 1.0000e+00 1.8829e-02 weaklyHypometh 9.1807e-01 2.1021e-02 weaklyHypometh 1.0000000 1.7231e-01 insignificant -0.06403935 1.2083e-01 lowCoverage 6.7501e-01 lowCoverage chrX 18814214 18815214 57875 ENSG00000219536 0.5761873 584 9 0.0520935 303 7 0.240780 305 7 0.0829120 182 7 0.2041321 215 7 0.141173 348 9 0.073455 493 9 0.334807 292 7 0.246692 300 9 0.325812 282 7 0.4211316 331 9 0.1922762 164 7 0.0291771 406 7 0.1791667 81 4 0.0726463 239 7 0.0878325 122 6 0.3234400 182 7 0.1471856 429 7 0.113985 447 7 0.412562 555 9 0.0500433 85 7 0.146336 137 7 0.186813 197 7 0.1948588 183 9 0.1612171 308 9 0.304111 419 9 0.238631 221 7 0.170778 139 7 0.482217 361 7 0.054100 276 9 0.3368791 437 9 0.103268 526 9 0.0104435 295 9 0.103383 469 7 0.327064 522 7 0.2264347 83 6 0.000000 110 8 0.243371 523 9 0.4212137 429 9 0.1866101 261 7 0.0617473 575 9 0.4580575 709 7 0.221408 218 9 0.4450426 0.0748312 0.2348055 0.0711456 0.2079134 0.084540 0.0685805 0.376230 0.2258689 0.3441198 0.3309372 0.174454 0.026567 0.1257687 0.0771521 0.1056536 0.3094473 0.1139923 0.0704154 0.3832221 0.0761922 0.1892170 0.076896 0.2697241 0.2422296 0.249350 0.2513975 0.267634 0.3154240 0.049392 0.2880311 0.114142 0.0160849 0.0999582 0.4728156 0.23342508 0.000000 0.271995 0.3441080 0.1606658 0.0615227 0.4154490 0.1727190 7 0.210383 0.215328 -4.9148e-03 7 0.171670 0.151563 0.02010671 8.7042e-01 9.8984e-01 insignificant 1.000000 1.000000 insignificant 0.9556678 9.8115e-01 insignificant 1 1.000000 insignificant 1.0434e-02 0.83152605 insignificant 1.00000 insignificant 0.210552 0.2388806 -0.0237739 7 0.223171 0.1739712 4.9200e-02 1.6429e-01 7.4797e-01 insignificant 7.0511e-01 1.0000e+00 insignificant 9.5181e-03 9.9986e-01 inconclusive 7.5540e-02 1.0000e+00 inconclusive 6.1090e-02 3.6394e-01 insignificant 1.0000e+00 insignificant 0.210585 0.2760036 -0.0718685 7 0.247968 0.292749 -0.04478133 9.4735e-01 2.6818e-02 weaklyHypometh 1.0000e+00 0.5705905 insignificant 9.1223e-01 1.4252e-01 insignificant 1.0000e+00 1.000000 insignificant -0.05693502 5.1187e-01 insignificant 1.0000e+00 insignificant 0.215919 0.2388806 -0.01614908 8 0.197032 0.1739712 0.0230611 2.3745e-01 7.9292e-01 insignificant 9.8220e-01 1.0000e+00 insignificant 5.6433e-02 9.9994e-01 insignificant 3.3196e-01 1.0000e+00 insignificant 0.05065504 4.5796e-01 insignificant 1.0000e+00 insignificant 0.216249 0.2760036 -6.7796e-02 9 0.218925 0.292749 -7.3824e-02 9.8852e-01 1.3657e-02 weaklyHypometh 1.0000e+00 7.1852e-01 insignificant 9.5834e-01 0.17705346 insignificant 1.0000e+00 1.00000 insignificant -0.06736952 4.4630e-01 insignificant 1.000000 insignificant 0.239000 0.2760036 -0.0441018 8 0.1933014 0.292749 -0.0994478 9.7698e-01 1.6774e-02 weaklyHypometh 1.0000e+00 1.0550e-01 insignificant 9.9997e-01 4.2263e-03 weaklyHypometh 1.0000000 4.9143e-02 weaklyHypometh -0.11802456 2.3890e-01 insignificant 1.0000e+00 insignificant chrX 23625614 23626614 57918 PRDX4 ENSG00000123131 0.5788073 121 8 0.6180141 150 7 0.621825 55 3 0.5667045 109 7 0.6296379 76 8 0.649150 114 8 0.661153 91 8 0.615393 93 5 0.493304 64 7 0.846726 41 3 0.7578463 159 5 0.5744048 32 4 0.7000401 99 8 0.5357143 50 7 0.6988095 56 8 0.6759259 34 4 0.6672932 63 4 0.6607291 110 6 0.532999 74 5 0.675521 73 7 0.6805556 28 1 0.750000 8 0 0.664034 69 6 0.5340909 46 5 0.6813596 61 4 0.624373 93 7 0.526961 43 3 0.537500 23 2 0.630273 104 8 0.593216 79 8 0.6672230 87 5 0.553587 106 8 0.5989113 106 8 0.432440 67 3 0.578166 66 5 0.8000000 12 0 0.575387 60 5 0.603817 105 5 0.6163065 103 8 0.6041705 127 8 0.5800587 112 5 0.6302083 60 6 0.572835 97 7 0.6338600 0.6012213 0.6587558 0.6412958 0.6582396 0.667499 0.6687649 0.624559 0.5411706 0.8280955 0.7721110 0.640542 0.736773 0.6157961 0.7420635 0.6991692 0.7462636 0.6286827 0.5585512 0.7181713 0.6975309 0.7638889 0.692181 0.5845208 0.7177144 0.632637 0.5977669 0.541667 0.6762735 0.620548 0.6831991 0.724109 0.6273453 0.4743717 0.5729618 0.69398148 0.500537 0.628745 0.6638615 0.6409975 0.6335143 0.6892361 0.6404521 0 0.656250 0.693440 -1.1161e-02 5 0.694839 0.511528 0.18331054 9.5892e-01 3.3289e-01 insignificant 1.000000 1.000000 insignificant 0.5975957 5.2700e-01 insignificant 1 1.000000 insignificant 1.7735e-02 0.52625446 lowCoverage 1.00000 lowCoverage 0.656250 0.6201923 0.0531641 7 0.694839 0.6640728 3.0766e-02 5.3721e-02 9.9352e-01 insignificant 2.6206e-01 1.0000e+00 insignificant 1.5561e-01 9.9763e-01 insignificant 8.0213e-01 1.0000e+00 insignificant 3.9880e-02 4.6477e-01 lowCoverage 1.0000e+00 lowCoverage 0.655214 0.6513026 0.0168706 8 0.618548 0.594408 0.02413985 1.3686e-01 5.1651e-01 insignificant 1.0000e+00 1.0000000 insignificant 4.8034e-02 6.1206e-01 weaklyHypermeth 8.7335e-01 1.000000 insignificant 0.03728397 9.2705e-02 insignificant 1.0000e+00 insignificant 0.693440 0.6201923 0.06948869 5 0.511528 0.6640728 -0.1525448 3.0262e-02 9.9831e-01 weaklyHypermeth 1.5131e-01 1.0000e+00 insignificant 9.1695e-02 9.9072e-01 insignificant 5.0660e-01 1.0000e+00 insignificant 0.02214419 6.8476e-01 lowCoverage 1.0000e+00 lowCoverage 0.695302 0.6513026 3.1264e-02 5 0.639410 0.594408 4.5002e-02 2.0259e-02 7.6967e-01 weaklyHypermeth 3.1748e-01 1.0000e+00 insignificant 5.0482e-02 0.85664091 insignificant 1.0000e+00 1.00000 insignificant 0.01954854 4.1580e-01 lowCoverage 1.000000 lowCoverage 0.618357 0.6513026 -0.0347258 7 0.5800910 0.594408 -0.0143174 4.1653e-01 6.1225e-02 insignificant 1.0000e+00 3.1398e-01 insignificant 6.9025e-01 2.0427e-01 insignificant 1.0000000 1.0000e+00 insignificant -0.00259565 9.5980e-01 lowCoverage 1.0000e+00 lowCoverage chrX 23936714 23937714 57933 CXorf58 ENSG00000165182 0.7244034 319 10 0.6591379 416 10 0.543918 208 8 0.7327338 216 10 0.5074004 358 7 0.569123 293 8 0.671890 377 7 0.731325 374 10 0.619343 271 8 0.659045 243 10 0.7052855 545 10 0.5661478 179 6 0.7791758 289 7 0.8003739 108 9 0.7022515 355 9 0.7821856 151 5 0.4618795 508 6 0.6451351 226 8 0.551589 426 10 0.711554 279 10 0.7092389 96 7 0.668036 91 7 0.681293 182 6 0.6605102 136 9 0.8123196 99 6 0.722894 433 9 0.725160 122 8 0.572963 105 6 0.732281 506 8 0.671316 457 10 0.6937901 437 10 0.732018 330 10 0.6729825 230 10 0.660531 325 8 0.548044 198 8 0.7511655 42 2 0.638894 228 7 0.682090 344 10 0.6911392 332 8 0.6838338 330 10 0.7779715 194 8 0.6235772 225 6 0.713054 203 8 0.7289590 0.6806084 0.6436584 0.7803529 0.6592462 0.714900 0.7077923 0.730654 0.6795227 0.7391280 0.7491241 0.621957 0.792244 0.6865234 0.7339955 0.6661319 0.6155422 0.7004209 0.7157797 0.7748277 0.7861731 0.7402210 0.790169 0.7149761 0.7502058 0.759729 0.7281077 0.665448 0.7455834 0.780312 0.7393703 0.741669 0.6980572 0.7002291 0.7169114 0.75165382 0.674990 0.741936 0.7362461 0.7571925 0.7592650 0.6926818 0.7360956 5 0.707416 0.734803 -3.3994e-02 8 0.666546 0.705168 -0.03862200 9.7793e-01 2.1907e-03 weaklyHypometh 1.000000 0.252750 insignificant 0.9969065 2.2140e-03 weaklyHypometh 1 0.345549 insignificant -4.2290e-02 0.12944436 insignificant 1.00000 insignificant 0.707464 0.6854426 0.0119671 8 0.690364 0.6868755 3.4884e-03 2.9274e-02 6.8079e-01 weaklyHypermeth 1.4785e-01 1.0000e+00 insignificant 1.1843e-01 5.7003e-01 insignificant 6.3674e-01 1.0000e+00 insignificant -2.7564e-03 9.3777e-01 insignificant 1.0000e+00 insignificant 0.707416 0.7133956 -0.0182115 8 0.666546 0.704924 -0.03837826 9.5800e-01 2.6903e-01 insignificant 1.0000e+00 1.0000000 insignificant 9.8116e-01 2.8610e-01 insignificant 1.0000e+00 1.000000 insignificant -0.04172031 2.3155e-01 insignificant 1.0000e+00 insignificant 0.734803 0.6852123 0.04277064 8 0.705168 0.6627890 0.0423787 2.2015e-04 8.7399e-01 weaklyHypermeth 1.7066e-03 1.0000e+00 weaklyHypermeth 5.4249e-03 8.3186e-01 weaklyHypermeth 4.6242e-02 1.0000e+00 weaklyHypermeth 0.03953373 2.4390e-01 insignificant 1.0000e+00 insignificant 0.734803 0.7133956 1.1998e-02 8 0.705168 0.704924 2.4374e-04 3.4856e-01 5.9005e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 4.9423e-01 0.83529039 insignificant 1.0000e+00 1.00000 insignificant 0.00056987 9.8526e-01 insignificant 1.000000 insignificant 0.685212 0.7133956 -0.0326499 8 0.6627890 0.704924 -0.0421350 9.7687e-01 2.1011e-02 weaklyHypometh 1.0000e+00 1.2657e-01 insignificant 9.1515e-01 1.9491e-01 insignificant 1.0000000 9.6972e-01 insignificant -0.03896386 3.1689e-01 insignificant 1.0000e+00 insignificant chrX 23972114 23973114 57935 KLHL15 ENSG00000174010 0.7725131 149 6 0.6213483 144 6 0.472840 52 6 0.8228008 126 6 0.5415344 72 6 0.825556 114 6 0.638156 118 5 0.821529 120 6 0.585297 62 6 0.721875 37 6 0.6649534 180 6 0.7500000 14 0 0.7932900 52 6 0.5941558 41 3 0.7277778 49 3 0.7222222 20 0 1.0000000 90 3 0.7306849 108 8 0.766919 75 6 0.764167 94 6 0.5700000 35 6 1.000000 24 3 0.812397 50 5 0.7408730 39 5 0.7477234 166 5 0.625324 147 6 0.596276 61 4 0.616667 30 3 0.783987 57 6 0.680159 88 6 0.7172263 110 6 0.806116 161 6 0.4816079 98 6 0.646405 125 5 0.696930 229 6 0.6666667 20 1 0.443934 57 3 0.777733 140 6 0.7200242 222 6 0.8107827 153 6 0.7651681 257 6 0.7316017 34 2 0.842556 147 5 0.7556518 0.6713140 0.5809179 0.7948169 0.8024068 0.760199 0.6206702 0.783351 0.7050615 0.8016304 0.7195368 0.782609 0.807736 0.7643634 0.7494565 0.7101449 0.9314778 0.8186277 0.7706522 0.7658514 0.4826087 0.7987739 0.861166 0.8243616 0.7080678 0.796815 0.6509330 0.702899 0.7747016 0.769367 0.7039205 0.774498 0.5900038 0.6156223 0.6961196 0.67391304 0.439698 0.726151 0.7307682 0.7808762 0.7466070 0.7328722 0.7807884 0 0.762238 0.771458 1.8124e-02 6 0.634566 0.665339 -0.03077326 1.3839e-01 4.5105e-01 insignificant 1.000000 1.000000 insignificant 0.4768642 5.1669e-01 insignificant 1 1.000000 insignificant -7.8481e-03 0.85906980 insignificant 1.00000 insignificant 0.767107 0.7365269 0.0876460 6 0.644407 0.5462565 9.8151e-02 3.3346e-04 9.9941e-01 weaklyHypermeth 2.3990e-03 1.0000e+00 weaklyHypermeth 5.4091e-03 1.0000e+00 weaklyHypermeth 4.4704e-02 1.0000e+00 weaklyHypermeth 9.8002e-02 1.3771e-01 lowCoverage 8.8287e-01 lowCoverage 0.763573 0.8302583 -0.0034033 5 0.692254 0.764345 -0.07209111 7.6912e-01 1.4630e-01 insignificant 1.0000e+00 1.0000000 insignificant 6.2968e-01 6.7400e-01 insignificant 1.0000e+00 1.000000 insignificant -0.05714566 1.2631e-01 insignificant 1.0000e+00 insignificant 0.776135 0.7380240 0.06022985 6 0.646378 0.6573676 -0.0109895 1.3685e-02 9.1457e-01 weaklyHypermeth 7.4783e-02 1.0000e+00 weaklyHypermeth 4.7290e-02 9.9213e-01 weaklyHypermeth 2.9191e-01 1.0000e+00 insignificant 0.10584968 1.2675e-01 lowCoverage 7.6818e-01 lowCoverage 0.771784 0.8302583 -2.5683e-02 5 0.665218 0.764345 -9.9126e-02 9.1944e-01 2.2070e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 9.4668e-01 0.51389469 insignificant 1.0000e+00 1.00000 insignificant -0.04929754 2.5616e-01 insignificant 1.000000 insignificant 0.737631 0.8308642 -0.0772470 5 0.6145385 0.800974 -0.1864356 9.9739e-01 1.2540e-02 weaklyHypometh 1.0000e+00 8.1961e-02 weaklyHypometh 9.9692e-01 6.1761e-02 insignificant 1.0000000 3.9089e-01 insignificant -0.15514722 3.2087e-02 lowCoverage 2.7902e-01 lowCoverage chrX 30144614 30145614 57951 MAGEB2 ENSG00000099399 0.7525253 59 6 0.7664336 61 4 0.569444 32 4 0.6203704 56 4 0.6851852 39 2 0.509387 80 5 0.338889 31 4 0.759441 80 4 1.000000 17 0 0.796296 23 0 0.8634607 93 4 0.8107143 35 6 0.8454416 41 2 0.6710317 61 5 0.6877551 41 6 0.6666667 14 1 0.5312500 21 2 0.8037851 63 6 0.755102 32 4 0.595833 46 5 0.7619048 17 0 0.937500 15 0 0.691188 70 2 0.7648148 33 4 0.8058712 38 2 0.674339 59 6 0.761224 30 4 0.510417 19 0 0.797064 44 6 0.757576 48 4 0.3863636 42 5 0.552910 55 6 0.6937831 47 5 0.626984 44 4 0.567901 44 4 0.2857143 7 0 0.680357 41 6 0.662458 75 6 0.7500000 45 5 0.6380952 47 4 0.8333333 26 4 0.6527778 28 2 0.850340 63 4 0.8219403 0.7316637 0.5930233 0.7093023 0.6705426 0.613304 0.4395349 0.822085 1.0000000 0.9108527 0.7914408 0.814784 0.955128 0.6406423 0.6750831 0.6279070 0.7074947 0.6285714 0.8239203 0.6341085 0.7519380 0.9003855 0.616544 0.8217054 0.8278717 0.696567 0.7721795 0.699612 0.7364517 0.713178 0.6515815 0.767442 0.7356035 0.6227390 0.6511628 0.31102990 0.719601 0.798097 0.7894057 0.6604651 0.7925388 0.5329457 0.8460687 0 0.723243 0.723404 5.6035e-03 6 0.706807 0.601766 0.10504116 8.6370e-01 9.7540e-01 insignificant 1.000000 1.000000 insignificant 0.9095994 9.9602e-01 insignificant 1 1.000000 insignificant 1.3529e-03 0.98043770 lowCoverage 1.00000 lowCoverage 0.720395 0.7286822 -0.0170800 4 0.626311 0.6539628 -2.7652e-02 9.5432e-01 7.3081e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 3.7939e-01 9.7570e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 1.1525e-01 1.4339e-01 lowCoverage 8.9412e-01 lowCoverage 0.724215 0.7846890 -0.0648140 5 0.740805 0.833639 -0.09283380 9.8375e-01 1.5692e-02 weaklyHypometh 1.0000e+00 0.4023605 insignificant 8.2207e-01 1.6728e-01 insignificant 1.0000e+00 1.000000 insignificant -0.04345866 4.5025e-01 lowCoverage 1.0000e+00 lowCoverage 0.724138 0.7286822 -0.00070982 4 0.602502 0.6539628 -0.0514606 8.4710e-01 4.8590e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 2.9924e-01 9.1640e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 0.11389811 1.6720e-01 lowCoverage 9.4997e-01 lowCoverage 0.736142 0.7846890 -6.2918e-02 5 0.716253 0.833639 -1.1739e-01 9.9361e-01 9.7941e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 9.3026e-01 0.36527261 insignificant 1.0000e+00 1.00000 insignificant -0.04481156 4.8328e-01 lowCoverage 1.000000 lowCoverage 0.742857 0.7846890 -0.0499357 4 0.7726109 0.833639 -0.0610280 9.8511e-01 2.1329e-01 lowCoverage 1.0000e+00 9.0378e-01 lowCoverage 9.9482e-01 1.6375e-01 lowCoverage 1.0000000 8.3544e-01 lowCoverage -0.15870967 7.0325e-02 lowCoverage 4.7198e-01 lowCoverage chrX 38636376 38637376 58002 MID1IP1 ENSG00000165175 0.75747 325 10 0.584332 178 10 0.65838 170 10 0.7203125 166 10 0.871875 65 4 0.749447 409 10 0.6604048 112 10 0.69194 219 10 0.66629 118 6 0.789922 116 10 0.66865 323 10 0.797917 77 6 0.742992 146 10 0.541126 48 3 0.754932 128 10 0.664078 55 4 0.619444 53 4 0.7396444 217 10 0.7445851 210 10 0.7282196 353 10 0.60278 53 6 0.760909 103 10 0.834059 182 10 0.75083 88 8 0.71430 100 8 0.71584 253 10 0.73121 139 9 0.58182 27 3 0.67496 136 8 0.706440 181 10 0.66166 217 10 0.6706603 440 10 0.639061 176 10 0.587183 156 10 0.5971532 305 10 0.627778 68 4 0.723095 101 10 0.67749 261 10 0.68224 263 10 0.748742 248 10 0.75092 209 10 0.79358 238 10 0.792513 204 10 0.78009 0.662481 0.65469 0.805474 0.839804 0.772854 0.71606691 0.70583 0.73607 0.797155 0.78206 0.8485294 0.7903387 0.691086 0.7991052 0.672683 0.65904 0.7745866 0.770218 0.760302 0.671887 0.798111 0.826959 0.77647 0.77360 0.74697 0.73250 0.62881 0.74489 0.772210 0.75821 0.7439765 0.703295 0.639048 0.54044371 0.699564 0.742661 0.71966 0.77592 0.793993 0.80034 0.81207 0.836463 4 0.719610 0.726941 1.1775e-03 10 0.736143 0.736300 -1.5720e-04 0.521157 7.1654e-01 insignificant 1 1.0000e+00 insignificant 0.634717 0.7812636 insignificant 1 1.00000 insignificant 0.0071429 0.7883189 insignificant 1 insignificant 0.719505 0.60169 0.1217932 10 0.716986 0.61163 0.1053558 1.3846e-06 9.9995e-01 weaklyHypermeth 5.3253e-05 1.0000e+00 weaklyHypermeth 9.6749e-03 9.9949e-01 weaklyHypermeth 2.4807e-01 1.0000000 insignificant 0.06563780 0.03120195 weaklyHypermeth 1.00000 insignificant 0.719046 0.80207 -0.0444211 10 0.688169 0.69473 -0.0065589 9.8444e-01 1.4688e-02 weaklyHypometh 1.0000000 5.8752e-01 insignificant 0.9894891 3.5939e-02 weaklyHypometh 1.00000 1.000000 insignificant -0.04600089 1.1297e-01 insignificant 1.0000000 insignificant 0.72632 0.60169 0.1177102 10 0.707190 0.61163 0.09556011 1.0536e-04 0.97814263 weaklyHypermeth 2.6420e-03 1.000000 weaklyHypermeth 1.4047e-02 0.9580735 weaklyHypermeth 2.7014e-01 1.00000 insignificant 0.05849485 0.06294705 insignificant 1.000000 insignificant 0.72608 0.80207 -0.0465897 10 0.688355 0.69473 -0.0063732 9.9483e-01 1.1882e-02 weaklyHypometh 1.00000000 0.84868021 insignificant 0.99807104 4.8621e-02 weaklyHypometh 1.000000 1.000000 insignificant -0.05314384 0.0869518 insignificant 1.00000 insignificant 0.60169 0.80276 -0.1780154 10 0.61163 0.76420 -0.1525706 0.99999 3.9234e-06 weaklyHypometh 1 3.7822e-04 weaklyHypometh 0.999994 1.3775e-04 weaklyHypometh 1 0.0225715 weaklyHypometh -0.1116387 0.0040464 weaklyHypometh 0.53210 insignificant chrX 39397578 39398578 58034 ENSG00000207122 0.32749 140 5 0.022600 316 5 0.12177 157 5 0.0095238 82 5 0.044804 173 5 0.025560 295 5 0.0033898 349 5 0.22162 294 5 0.14751 152 5 0.060023 103 5 0.12200 489 5 0.020000 71 5 0.011396 201 5 0.037500 103 5 0.024265 136 5 0.043478 81 5 NA 0 0 0.0899471 91 5 0.0084188 365 3 0.0000000 418 5 0.00000 91 5 0.000000 74 5 0.000000 65 3 0.14762 181 5 0.40000 15 3 0.16831 478 5 0.13727 268 5 0.12056 67 5 0.19912 271 5 0.000000 251 5 0.11132 418 5 0.0014184 538 5 0.000000 172 5 0.096296 179 5 0.0013889 406 5 NA 0 0 0.060697 176 5 0.36605 383 5 0.25388 414 5 0.036111 140 5 0.24036 148 5 0.23548 96 3 0.108333 81 3 0.31156 0.033329 0.12086 0.013651 0.047546 0.027272 0.00090395 0.24859 0.17360 0.047413 0.12266 0.0053333 0.0169634 0.039167 0.0064706 0.062319 NA 0.0963845 0.012484 0.000000 0.000000 0.000000 0.000000 0.12533 0.36298 0.24774 0.10434 0.14826 0.17355 0.000000 0.11077 0.0021513 0.000000 0.090185 0.00037037 NA 0.054028 0.41228 0.24944 0.022593 0.20663 0.34882 0.038611 3 0.070219 0.099742 -3.0133e-02 5 0.057327 0.079403 -2.2075e-02 0.991951 2.5259e-01 insignificant 1 1.0000e+00 insignificant 0.949035 0.5866087 insignificant 1 1.00000 insignificant -0.0365393 0.3705157 lowCoverage 1 lowCoverage 0.070237 0.13906 -0.0848015 5 0.068793 0.13240 -0.0636115 6.8026e-01 6.0317e-02 insignificant 1.0000e+00 1.0000e+00 insignificant 5.8011e-01 8.1983e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.03429178 0.64899865 lowCoverage 1.00000 lowCoverage 0.070237 0.20478 -0.1341523 5 0.068793 0.20969 -0.1409018 1.0000e+00 5.1060e-08 weaklyHypometh 1.0000000 1.7020e-05 weaklyHypometh 0.9997364 7.4147e-03 weaklyHypometh 1.00000 0.529624 insignificant -0.10423749 7.3808e-02 lowCoverage 1.0000000 lowCoverage 0.09978 0.13906 -0.0498832 5 0.095283 0.13240 -0.03712114 5.3286e-01 0.40702686 insignificant 1.0000e+00 1.000000 insignificant 6.8435e-01 0.8044650 insignificant 1.0000e+00 1.00000 insignificant 0.00224754 0.97736993 lowCoverage 1.000000 lowCoverage 0.09978 0.20478 -0.1031881 5 0.095283 0.20969 -0.1144114 9.9999e-01 8.5272e-05 weaklyHypometh 1.00000000 0.01421196 weaklyHypometh 0.99794164 3.0513e-02 weaklyHypometh 1.000000 1.000000 insignificant -0.06769817 0.2532716 lowCoverage 1.00000 lowCoverage 0.13906 0.20478 -0.0412620 5 0.13240 0.20969 -0.0772903 0.96689 1.4406e-03 weaklyHypometh 1 4.3937e-02 weaklyHypometh 0.991902 1.0924e-01 insignificant 1 1.0000000 insignificant -0.0699457 0.4148335 lowCoverage 1.00000 lowCoverage chrX 39499570 39500570 58044 ENSG00000207122 0.75272 488 9 0.746785 239 6 0.54072 128 7 0.8364493 222 9 0.768897 116 7 0.894207 295 9 0.7101684 110 7 0.81440 214 7 0.56309 112 7 0.855291 65 7 0.84991 513 10 0.666667 11 0 0.634757 231 7 0.765388 72 6 0.719438 91 7 0.566667 14 2 NA 0 0 0.5665974 334 7 0.6937502 591 9 0.8237288 514 9 0.73876 81 6 0.315897 37 3 0.926793 101 7 0.59127 158 9 0.73806 126 7 0.75112 527 9 0.58827 177 7 0.58032 71 5 0.79441 541 9 0.713730 259 7 0.77422 545 9 0.8781895 553 9 0.254321 196 9 0.380411 295 9 0.7577855 422 7 0.333333 12 2 0.058055 213 7 0.45158 596 9 0.64884 355 9 0.653426 179 9 0.69077 321 8 0.79529 300 6 0.498488 165 9 0.91033 0.722981 0.52203 0.865931 0.823679 0.899806 0.76567525 0.80208 0.66038 0.895211 0.84129 0.4827138 0.5814989 0.654601 0.6908858 0.718513 NA 0.5003486 0.683603 0.860591 0.883980 0.561290 0.889670 0.72302 0.81755 0.78521 0.70284 0.63876 0.80038 0.756852 0.75181 0.9048584 0.042775 0.439678 0.47263053 NA 0.030500 0.41493 0.68771 0.743189 0.76924 0.78654 0.545363 3 0.732217 0.768504 -3.4000e-02 9 0.823762 0.644203 1.7956e-01 0.999993 2.5935e-01 insignificant 1 1.0000e+00 insignificant 0.973232 0.4422636 insignificant 1 1.00000 insignificant 0.0254654 0.6383628 insignificant 1 insignificant 0.731926 0.35813 0.3713993 9 0.752722 0.35581 0.3969143 5.8117e-16 1.0000e+00 hypermethylated 1.1623e-13 1.0000e+00 hypermethylated 2.3448e-09 1.0000e+00 hypermethylated 7.8158e-07 1.0000000 hypermethylated 0.35213657 0.01241226 weaklyHypermeth 0.59106 insignificant 0.731971 0.60045 0.0707831 9 0.753267 0.67832 0.0749498 2.2381e-03 9.0334e-01 weaklyHypermeth 0.1865083 1.0000e+00 insignificant 0.0511628 8.6309e-01 insignificant 1.00000 1.000000 insignificant 0.06735548 2.5549e-01 insignificant 1.0000000 insignificant 0.76892 0.35834 0.4053683 9 0.728985 0.38815 0.34083085 2.9344e-17 1.00000000 hypermethylated 1.4672e-14 1.000000 hypermethylated 9.5128e-09 1.0000000 hypermethylated 3.7644e-06 1.00000 hypermethylated 0.32667119 0.01597640 weaklyHypermeth 0.639056 insignificant 0.76989 0.60045 0.1076280 9 0.801884 0.67832 0.1235665 1.4094e-06 9.9963e-01 weaklyHypermeth 0.00046979 1.00000000 weaklyHypermeth 0.04887517 9.9477e-01 weaklyHypermeth 1.000000 1.000000 insignificant 0.04189010 0.5430077 insignificant 1.00000 insignificant 0.35855 0.60045 -0.2834745 9 0.42697 0.67832 -0.2513474 0.99878 5.2338e-06 hypomethylated 1 4.0260e-04 hypomethylated 0.999998 1.5817e-04 hypomethylated 1 0.0225715 hypomethylated -0.2847811 0.0301971 weaklyHypometh 0.87017 insignificant chrX 39560470 39561470 58052 ENSG00000219004 0.51388 157 5 0.033670 123 3 0.37379 180 5 0.3904676 94 3 0.450199 134 5 0.373529 146 5 0.1639069 269 5 0.50547 129 5 0.48436 149 4 0.329516 158 5 0.32332 264 5 0.250000 74 2 0.309091 119 4 0.388889 10 1 0.055556 72 3 0.300000 100 3 0.080383 139 2 0.3459225 77 4 0.3365079 133 5 0.2601219 235 5 0.28061 36 4 0.253333 34 2 0.365263 111 5 0.36273 78 5 0.62963 43 2 0.35657 264 5 0.34576 83 5 0.48896 70 5 0.38247 165 5 0.325324 171 5 0.36742 213 5 0.2517160 246 5 0.370000 94 5 0.307214 108 4 0.2652284 236 3 0.000000 59 3 0.441865 78 5 0.43264 213 5 0.43663 231 5 0.294967 112 3 0.50840 244 4 0.57303 52 4 0.380063 115 4 0.31472 0.087521 0.23055 0.163170 0.191460 0.102496 0.04951669 0.33102 0.28692 0.126675 0.17275 0.0757576 0.0619835 0.103037 0.1226453 0.037879 0.08881 0.0740707 0.068543 0.070346 0.073232 0.050505 0.114434 0.22176 0.41975 0.23700 0.29161 0.37227 0.15973 0.078459 0.15448 0.0552463 0.071970 0.117626 0.09883095 0.055051 0.187996 0.24915 0.33131 0.299578 0.26819 0.44056 0.100353 0 0.197030 0.264201 -8.3321e-03 5 0.308185 0.299956 8.2287e-03 0.513937 6.8487e-01 insignificant 1 1.0000e+00 insignificant 0.723284 0.4522084 insignificant 1 1.00000 insignificant -0.0540529 0.2244634 lowCoverage 1 lowCoverage 0.197388 0.17640 -0.0132393 5 0.369822 0.38893 -0.0191112 6.7187e-01 2.2905e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.9502e-01 2.3393e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.01060494 0.88959203 lowCoverage 1.00000 lowCoverage 0.197316 0.31830 -0.1581664 5 0.308185 0.43819 -0.1300028 1.0000e+00 4.5554e-06 weaklyHypometh 1.0000000 7.1081e-04 weaklyHypometh 0.9997408 1.4903e-03 weaklyHypometh 1.00000 0.179528 insignificant -0.12519018 6.3037e-02 lowCoverage 1.0000000 lowCoverage 0.26473 0.17640 -0.0030982 5 0.359948 0.38893 -0.02898562 5.9913e-01 0.04483691 weaklyHypometh 1.0000e+00 1.000000 insignificant 3.1758e-01 0.2013352 insignificant 1.0000e+00 1.00000 insignificant 0.06465784 0.40645520 lowCoverage 1.000000 lowCoverage 0.26473 0.31873 -0.1611150 5 0.359948 0.52583 -0.1658777 9.9995e-01 6.1512e-07 weaklyHypometh 1.00000000 0.00061512 weaklyHypometh 0.99912159 2.4802e-03 weaklyHypometh 1.000000 0.620045 insignificant -0.07113728 0.2512963 lowCoverage 1.00000 lowCoverage 0.17640 0.31873 -0.1335791 5 0.38893 0.52583 -0.1368921 0.99912 2.5843e-03 weaklyHypometh 1 6.1530e-02 weaklyHypometh 0.997006 2.7298e-02 weaklyHypometh 1 0.6178898 insignificant -0.1357951 0.1356474 lowCoverage 1.00000 lowCoverage chrX 39599470 39600470 58057 ENSG00000219004 0.65955 134 7 0.387542 93 8 0.58288 66 7 0.7730159 116 3 0.520679 68 7 0.672560 67 3 0.4575511 102 7 0.64085 79 7 0.73958 33 3 0.942857 25 3 0.71186 269 7 0.404762 16 0 0.425468 70 4 0.666667 10 0 0.770833 27 3 NA 0 0 0.900000 16 3 0.6618518 115 3 0.4627778 166 7 0.6532513 95 6 0.74675 38 4 0.500000 9 1 0.787037 37 4 0.36458 66 8 0.56444 104 4 0.60409 235 8 0.67424 43 4 0.56973 34 2 0.60272 104 7 0.530530 133 8 0.63971 263 8 0.4671717 129 7 0.279404 94 8 0.330864 181 7 0.5216590 354 6 0.622259 64 4 0.300595 102 7 0.66854 195 8 0.67702 143 4 0.659858 63 4 0.75810 178 4 0.44689 116 3 0.530754 84 3 0.69933 0.378370 0.49507 0.718227 0.560057 0.570100 0.42973968 0.66249 0.95690 1.000000 0.73255 0.3678161 0.3721949 0.678727 0.6489613 NA 0.70069 0.5102681 0.346006 0.512278 0.689655 0.481794 0.682057 0.35212 0.53977 0.58160 0.55486 0.49754 0.60730 0.464848 0.59658 0.4942529 0.179021 0.344243 0.50758621 0.386267 0.218391 0.59303 0.76281 0.629479 0.70307 0.66273 0.503900 0 0.558392 0.547280 -1.2325e-02 7 0.536616 0.569913 -3.3296e-02 0.849323 2.7670e-01 insignificant 1 1.0000e+00 insignificant 0.473301 0.6215032 insignificant 1 1.00000 insignificant 0.0458132 0.3664528 lowCoverage 1 lowCoverage 0.558392 0.43939 0.1608262 7 0.536616 0.42686 0.1097590 2.0286e-04 9.9816e-01 weaklyHypermeth 4.9478e-03 1.0000e+00 weaklyHypermeth 5.3869e-04 9.9958e-01 weaklyHypermeth 2.1615e-02 1.0000000 weaklyHypermeth 0.17950980 0.05355850 lowCoverage 1.00000 lowCoverage 0.560179 0.68900 -0.2042424 3 0.603693 0.75551 -0.1518187 9.3517e-01 2.4404e-05 lowCoverage 1.0000000 2.7115e-03 lowCoverage 0.7518970 1.5385e-02 lowCoverage 1.00000 0.854712 lowCoverage 0.01887056 7.8395e-01 lowCoverage 1.0000000 lowCoverage 0.54728 0.43939 0.1649962 7 0.569913 0.42686 0.14305541 5.6708e-06 0.99811660 weaklyHypermeth 2.3628e-04 1.000000 weaklyHypermeth 1.2867e-03 0.9937237 weaklyHypermeth 4.6406e-02 1.00000 weaklyHypermeth 0.13369661 0.12789412 insignificant 1.000000 insignificant 0.54874 0.68900 -0.2241023 3 0.616152 0.75551 -0.1393603 9.6281e-01 2.6163e-06 lowCoverage 1.00000000 0.00087209 lowCoverage 0.91769750 7.0520e-03 lowCoverage 1.000000 1.000000 lowCoverage -0.02694264 0.6909626 lowCoverage 1.00000 lowCoverage 0.44028 0.68900 -0.3889428 3 0.48021 0.75551 -0.2752976 0.97699 2.6240e-08 lowCoverage 1 6.5600e-06 lowCoverage 0.875905 1.7268e-04 lowCoverage 1 0.0225715 lowCoverage -0.1606392 0.1069436 lowCoverage 1.00000 lowCoverage chrX 39826870 39827870 58081 BCOR ENSG00000183337 0.38915 303 12 0.141401 266 16 0.29331 416 16 0.3002082 119 3 0.136690 227 13 0.297024 317 17 0.2088212 520 14 0.43419 210 13 0.52031 398 14 0.438375 431 14 0.12538 440 19 0.045525 307 12 0.112255 441 14 0.356638 75 5 0.124497 216 11 0.046154 210 11 0.237261 369 11 0.1450667 170 10 0.0600711 216 12 0.3225888 558 17 0.21915 85 5 0.233357 137 7 0.280302 228 13 0.20038 159 12 0.51484 95 8 0.35056 376 15 0.49977 267 15 0.45694 168 11 0.28532 201 12 0.203856 288 17 0.31747 372 19 0.1675381 632 17 0.121898 253 14 0.045851 258 10 0.2205128 226 12 0.035897 72 8 0.294956 151 11 0.16105 400 17 0.48361 336 14 0.169223 174 10 0.26868 196 10 0.28160 285 11 0.483313 98 5 0.48291 0.130678 0.26994 0.256063 0.341115 0.331172 0.14680332 0.39454 0.40412 0.247935 0.24192 0.1296148 0.0657341 0.345147 0.1897785 0.133237 0.37052 0.1781384 0.068255 0.114476 0.313226 0.154399 0.143867 0.32116 0.42491 0.31014 0.39061 0.47087 0.24742 0.206495 0.37045 0.1221053 0.192629 0.051517 0.01750380 0.064109 0.342140 0.12801 0.56307 0.214872 0.44019 0.37776 0.350531 4 0.214688 0.235353 -2.2750e-02 14 0.297547 0.302522 -4.9753e-03 0.775165 1.7226e-01 insignificant 1 1.0000e+00 insignificant 0.986223 0.0153711 weaklyHypometh 1 1.00000 insignificant -0.0740436 0.1294862 insignificant 1 insignificant 0.214688 0.14853 0.0810824 13 0.297547 0.17915 0.1184001 1.3404e-04 9.9648e-01 weaklyHypermeth 3.3509e-03 1.0000e+00 weaklyHypermeth 3.0749e-03 9.9980e-01 weaklyHypermeth 9.9192e-02 1.0000000 weaklyHypermeth 0.09005280 0.10997417 insignificant 1.00000 insignificant 0.214343 0.42792 -0.1555465 10 0.280145 0.30746 -0.0273142 9.8852e-01 1.4214e-08 weaklyHypometh 1.0000000 1.4214e-05 weaklyHypometh 0.9931133 1.6158e-03 weaklyHypometh 1.00000 0.179528 insignificant -0.10054030 2.0145e-01 insignificant 1.0000000 insignificant 0.23535 0.14853 0.1045355 13 0.302522 0.17915 0.12337535 1.6406e-05 0.99993536 weaklyHypermeth 5.2922e-04 1.000000 weaklyHypermeth 2.6211e-06 0.9999999 weaklyHypermeth 6.5527e-04 1.00000 weaklyHypermeth 0.16409640 0.01022147 weaklyHypermeth 0.515575 insignificant 0.23372 0.42792 -0.1402710 11 0.284243 0.30746 -0.0232160 8.4137e-01 3.8424e-03 weaklyHypometh 1.00000000 0.38423673 insignificant 0.85426103 1.1002e-01 insignificant 1.000000 1.000000 insignificant -0.02649670 0.7236117 insignificant 1.00000 insignificant 0.14676 0.42792 -0.2565902 10 0.15719 0.30746 -0.1502682 0.99992 1.0676e-07 hypomethylated 1 1.7793e-05 hypomethylated 0.999999 1.8500e-03 weaklyHypometh 1 0.1088226 insignificant -0.1905931 0.0381099 weaklyHypometh 0.94590 insignificant chrX 39893070 39894070 58090 BCOR ENSG00000183337 0.30986 253 5 0.047579 96 5 0.29897 186 5 0.0166667 110 5 0.084302 170 5 0.106318 208 5 0.0277712 349 5 0.26159 161 5 0.34601 192 5 0.249649 153 5 0.16072 232 5 0.051767 92 5 0.003663 189 5 0.023016 35 2 0.026251 95 5 0.035526 74 5 0.148148 84 3 0.0713812 155 5 0.0472902 246 5 0.0059738 335 5 0.14003 50 5 0.000000 40 2 0.078106 105 5 0.20711 106 5 0.52280 50 4 0.26378 278 5 0.30244 130 5 0.45040 80 5 0.49803 207 5 0.029412 192 5 0.27173 339 5 0.0447784 364 5 0.767955 61 5 0.502098 215 5 0.8721311 235 5 0.094949 57 5 0.904762 40 3 0.14743 289 5 0.28320 252 5 0.151926 139 5 0.45699 219 5 0.53372 284 4 0.090258 126 5 0.40249 0.055340 0.28377 0.011818 0.103174 0.103519 0.03587941 0.24457 0.19763 0.224123 0.20769 0.0418720 0.0036131 0.101798 0.0441046 0.039384 0.13369 0.0941910 0.039882 0.004499 0.124304 0.000000 0.081883 0.23178 0.44034 0.24036 0.23777 0.47169 0.34647 0.024866 0.29954 0.0458848 0.830036 0.481576 0.73554396 0.097199 0.970455 0.10461 0.33289 0.146436 0.30677 0.35687 0.094308 5 0.120528 0.222050 -9.7021e-02 5 0.232702 0.251684 -1.8983e-02 0.997283 3.5329e-03 weaklyHypometh 1 4.4162e-01 insignificant 0.999785 0.0168793 weaklyHypometh 1 1.00000 insignificant -0.1179303 0.0627138 lowCoverage 1 lowCoverage 0.120918 0.48495 -0.3722068 5 0.271485 0.48840 -0.2169111 1.0000e+00 1.3376e-10 hypomethylated 1.0000e+00 1.3376e-07 hypomethylated 9.9988e-01 1.2209e-06 hypomethylated 1.0000e+00 0.0012209 hypomethylated -0.43209884 0.03169140 lowCoverage 1.00000 lowCoverage 0.120528 0.33235 -0.1991569 5 0.232702 0.37601 -0.1433067 9.9922e-01 7.1802e-08 weaklyHypometh 1.0000000 1.7951e-05 weaklyHypometh 0.9996333 2.5128e-04 weaklyHypometh 1.00000 0.050255 weaklyHypometh -0.18709641 9.2567e-02 lowCoverage 1.0000000 lowCoverage 0.22262 0.48495 -0.2729819 5 0.293632 0.48840 -0.19476442 9.9882e-01 0.00019349 hypomethylated 1.0000e+00 0.064497 hypomethylated 9.9966e-01 0.0021115 weaklyHypometh 1.0000e+00 0.70382 insignificant -0.31416858 0.08865338 lowCoverage 1.000000 lowCoverage 0.22205 0.33235 -0.0977800 5 0.251684 0.37601 -0.1243238 9.8346e-01 4.8106e-02 weaklyHypometh 1.00000000 1.00000000 insignificant 0.96624855 2.9531e-01 insignificant 1.000000 1.000000 insignificant -0.06916616 0.5125085 lowCoverage 1.00000 lowCoverage 0.48495 0.33202 0.1772083 5 0.48840 0.35534 0.1330533 0.03849 9.8767e-01 weaklyHypermeth 1 1.0000e+00 insignificant 0.021170 9.9884e-01 weaklyHypermeth 1 1.0000000 insignificant 0.2450024 0.1882582 lowCoverage 1.00000 lowCoverage chrX 40006164 40007164 58094 BCOR ENSG00000183337 0.82125 193 5 0.576950 81 6 0.62206 106 5 0.8961039 92 3 0.812821 78 5 0.953700 148 5 0.8592075 89 5 0.87430 124 5 0.89336 88 5 0.890542 68 5 0.84157 190 6 0.533333 11 0 0.733333 94 3 0.880952 33 3 0.747851 52 3 0.542857 23 3 0.666667 9 1 0.6610079 127 3 0.8065832 228 5 0.9293929 252 5 0.94444 27 2 0.733095 30 4 0.893371 70 3 0.66429 66 6 0.95268 86 3 0.85069 131 5 0.81617 103 5 0.89810 38 5 0.77872 139 5 0.837595 84 5 0.77483 171 5 0.9556765 249 5 0.456845 61 5 0.389485 241 5 0.4118715 347 6 0.095238 25 1 0.295423 98 6 0.50243 226 5 0.84753 210 5 0.550556 100 5 0.67689 193 3 0.66004 136 3 0.867168 81 3 0.91247 0.514826 0.53959 0.927067 0.889070 0.916813 0.87134250 0.89918 0.86774 0.862288 0.88251 0.8079096 0.8521657 0.859348 0.8725187 0.819613 0.67109 0.7398815 0.834569 0.904067 0.985876 0.763610 0.891350 0.81646 0.92982 0.82524 0.87131 0.94040 0.90670 0.897149 0.79649 0.9197811 0.381280 0.382435 0.37375272 0.417308 0.394404 0.53955 0.85175 0.705651 0.68647 0.65555 0.888195 3 0.841802 0.865046 -2.4717e-02 5 0.816711 0.839070 -2.2359e-02 0.936456 2.5505e-01 insignificant 1 1.0000e+00 insignificant 0.977564 0.1884471 insignificant 1 1.00000 insignificant -0.0644462 0.1179251 lowCoverage 1 lowCoverage 0.841802 0.38392 0.4379052 5 0.816711 0.39674 0.4199683 6.7408e-22 1.0000e+00 hypermethylated 3.3704e-19 1.0000e+00 hypermethylated 2.8269e-08 9.9997e-01 hypermethylated 5.6539e-06 1.0000000 hypermethylated 0.41864313 0.00029067 lowCoverage 0.06843 lowCoverage 0.841802 0.74548 0.0963362 3 0.816711 0.73536 0.0813544 3.4737e-03 8.0731e-01 lowCoverage 0.2233556 1.0000e+00 lowCoverage 0.0360016 8.9651e-01 lowCoverage 1.00000 1.000000 lowCoverage 0.05675579 4.2886e-01 lowCoverage 1.0000000 lowCoverage 0.86516 0.38353 0.4593539 5 0.862060 0.34007 0.52199451 1.8001e-17 1.00000000 hypermethylated 1.4672e-14 1.000000 hypermethylated 1.1293e-08 0.9999998 hypermethylated 3.7644e-06 1.00000 hypermethylated 0.48308936 0.00014672 lowCoverage 0.036680 lowCoverage 0.86516 0.74583 0.1234734 3 0.862060 0.77316 0.0888969 1.0189e-03 9.9504e-01 lowCoverage 0.10189010 1.00000000 lowCoverage 0.01886537 9.9546e-01 lowCoverage 1.000000 1.000000 lowCoverage 0.12120202 0.1176040 lowCoverage 1.00000 lowCoverage 0.38353 0.74583 -0.3451472 3 0.34007 0.77316 -0.4330976 1.00000 4.2286e-05 lowCoverage 1 2.4874e-03 lowCoverage 1.000000 3.5504e-04 lowCoverage 1 0.0355042 lowCoverage -0.3618873 0.0021474 lowCoverage 0.53210 lowCoverage chrX 40307664 40308664 58110 ENSG00000216880 0.66209 113 6 0.630029 113 6 0.62857 45 6 0.7024362 99 6 0.752092 37 3 0.626701 105 6 0.4452381 54 2 0.66621 96 7 0.81548 44 6 0.700000 36 2 0.65485 227 6 0.416667 6 0 0.835867 75 6 0.585714 27 2 0.442857 35 3 0.500000 8 0 0.000000 1 0 0.6042697 86 6 0.6637709 96 6 0.6837928 91 5 0.59048 30 3 0.866667 15 0 0.701813 53 3 0.82143 48 3 0.84319 130 5 0.75553 140 6 0.63496 49 6 0.75833 13 2 0.70063 90 6 0.672881 121 7 0.68857 174 7 0.7329732 142 6 0.658075 79 6 0.747585 97 5 0.6733491 249 6 0.791667 12 0 0.460080 97 6 0.65334 166 6 0.77805 84 6 0.741563 135 5 0.69994 184 6 0.67937 54 6 0.732160 112 5 0.72274 0.720486 0.66519 0.835126 0.847475 0.716071 0.58333333 0.76503 0.75794 0.800000 0.75405 0.6423874 0.8299415 0.583333 0.7226255 0.533333 NA 0.7908791 0.780081 0.784905 0.693889 0.866875 0.774819 0.78333 0.82047 0.71795 0.78023 0.75387 0.82518 0.771029 0.80637 0.8519701 0.747148 0.726329 0.61335502 0.858333 0.516377 0.74558 0.78963 0.746010 0.81845 0.70873 0.839734 0 0.736880 0.802985 -3.0500e-02 6 0.574103 0.723936 -1.4983e-01 0.992582 1.9408e-01 insignificant 1 1.0000e+00 insignificant 0.978648 0.1690839 insignificant 1 1.00000 insignificant -0.1297876 0.0100801 lowCoverage 1 lowCoverage 0.736540 0.73429 0.0650733 6 0.615769 0.52545 0.0903162 4.5164e-03 9.2719e-01 weaklyHypermeth 7.2846e-02 1.0000e+00 weaklyHypermeth 2.6742e-01 9.8017e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.06318290 0.32411284 lowCoverage 1.00000 lowCoverage 0.736540 0.81722 -0.0159276 6 0.615769 0.58836 0.0274129 5.4234e-01 3.8001e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.3139461 6.7946e-01 insignificant 1.00000 1.000000 insignificant -0.12538306 9.0203e-03 lowCoverage 0.6361755 lowCoverage 0.80279 0.73534 0.0819174 6 0.684498 0.60052 0.08398010 5.2093e-04 0.98537005 weaklyHypermeth 1.0419e-02 1.000000 weaklyHypermeth 5.2693e-02 0.9990684 insignificant 8.1239e-01 1.00000 insignificant 0.06660468 0.24069067 lowCoverage 1.000000 lowCoverage 0.80279 0.81866 0.0197185 6 0.684498 0.67241 0.0120907 3.0051e-01 7.8255e-01 insignificant 1.00000000 1.00000000 insignificant 0.12000092 9.8385e-01 insignificant 1.000000 1.000000 insignificant 0.00440453 0.8834170 lowCoverage 1.00000 lowCoverage 0.73429 0.81722 -0.0524046 6 0.52545 0.58836 -0.0629032 0.87179 1.8399e-02 weaklyHypometh 1 2.7877e-01 insignificant 0.964842 3.6724e-01 insignificant 1 1.0000000 insignificant -0.0622002 0.2545786 lowCoverage 1.00000 lowCoverage chrX 40793040 40794040 58122 ENSG00000216866 0.81562 303 11 0.711818 148 8 0.61706 93 8 0.7202012 218 11 0.744692 64 8 0.816488 349 11 0.5861336 82 5 0.80395 143 7 0.67110 66 4 0.728235 83 8 0.80145 227 8 0.774653 57 4 0.738874 116 8 0.942857 33 5 0.824697 105 8 0.740865 44 4 0.600523 791 7 0.5960630 194 11 0.7574965 204 11 0.7876343 254 11 0.80165 39 3 0.922222 52 4 0.857591 165 11 0.86019 61 7 0.85271 71 8 0.72687 269 11 0.79928 62 5 0.51481 26 3 0.79581 103 8 0.807492 191 11 0.76287 236 11 0.7033619 401 11 0.650758 124 8 0.788862 108 8 0.7245068 207 11 0.883447 73 4 0.598485 55 3 0.78627 191 11 0.83317 245 11 0.817376 334 11 0.87687 231 11 0.83035 225 11 0.761343 272 11 0.88014 0.745371 0.62565 0.867093 0.852712 0.855043 0.80031264 0.85413 0.72297 0.937124 0.79566 0.7267130 0.8757100 0.895776 0.8419985 0.761014 0.85619 0.8456931 0.893015 0.865809 0.810101 0.885556 0.878383 0.83407 0.84689 0.82761 0.91168 0.73889 0.83822 0.884216 0.79774 0.8773449 0.690382 0.799999 0.74630556 0.871016 0.906481 0.81617 0.84618 0.917621 0.89158 0.88065 0.903988 3 0.789961 0.818945 -2.0241e-02 11 0.583303 0.726128 -1.4282e-01 0.999585 1.1127e-01 insignificant 1 1.0000e+00 insignificant 0.999996 0.1960970 insignificant 1 1.00000 insignificant -0.0447187 0.2309326 insignificant 1 insignificant 0.790495 0.78042 0.0294658 8 0.598002 0.72317 -0.1251678 2.6969e-01 8.6990e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 6.4641e-01 9.1428e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.00029942 0.99506178 insignificant 1.00000 insignificant 0.790789 0.86993 -0.0746999 11 0.662002 0.74140 -0.0793991 1.0000e+00 4.7031e-04 weaklyHypometh 1.0000000 3.3594e-02 weaklyHypometh 0.9999882 2.9791e-02 weaklyHypometh 1.00000 1.000000 insignificant -0.08480026 7.6592e-03 weaklyHypometh 0.5891713 insignificant 0.82004 0.77836 0.0495181 8 0.754317 0.64705 0.10726994 9.9167e-02 0.99888385 insignificant 9.7223e-01 1.000000 insignificant 1.8655e-01 0.9970611 insignificant 1.0000e+00 1.00000 insignificant 0.04501814 0.40447252 insignificant 1.000000 insignificant 0.82175 0.86993 -0.0520851 11 0.772149 0.74140 0.0307480 9.9997e-01 1.3483e-02 weaklyHypometh 1.00000000 0.89887940 insignificant 0.99937989 5.1049e-01 insignificant 1.000000 1.000000 insignificant -0.04008154 0.2739318 insignificant 1.00000 insignificant 0.78191 0.87260 -0.0991346 8 0.75293 0.88968 -0.1367554 1.00000 4.4715e-04 weaklyHypometh 1 1.7886e-02 weaklyHypometh 0.999996 3.0370e-02 weaklyHypometh 1 0.6279997 insignificant -0.0850997 0.1083838 insignificant 1.00000 insignificant chrX 41126440 41127440 58132 ENSG00000223278 0.70986 538 18 0.815938 302 18 0.69518 297 16 0.6652469 246 15 0.765796 166 16 0.747311 445 16 0.7593509 272 16 0.66689 250 15 0.78414 199 12 0.713867 199 13 0.71305 377 17 0.765697 115 9 0.762394 238 13 0.703704 22 1 0.659484 235 14 0.739047 129 12 0.743546 684 18 0.7519274 205 18 0.6992222 290 13 0.8088736 446 16 0.69603 123 8 0.765641 133 12 0.729141 318 16 0.70202 255 14 0.75428 185 12 0.79551 318 16 0.78332 216 15 0.67013 167 13 0.61834 230 12 0.791290 323 18 0.71890 388 18 0.6920312 708 16 0.686457 211 15 0.702296 232 15 0.7208551 327 18 0.741025 169 11 0.730036 315 12 0.65531 298 16 0.75963 482 16 0.859044 481 15 0.83361 433 16 0.75927 379 12 0.808640 438 16 0.74781 0.795467 0.70273 0.785041 0.778080 0.740829 0.71420520 0.71245 0.76083 0.773724 0.74608 0.7582375 0.7594517 0.758811 0.6980788 0.717310 0.72710 0.8133033 0.720154 0.775574 0.758179 0.733654 0.750297 0.73611 0.72614 0.78382 0.70770 0.70686 0.73554 0.757676 0.71616 0.7449135 0.706665 0.770816 0.64792991 0.761045 0.666421 0.73779 0.79004 0.796698 0.83872 0.79753 0.791677 8 0.773137 0.759810 6.1700e-03 16 0.735000 0.716438 1.8562e-02 0.078569 5.0817e-01 insignificant 1 1.0000e+00 insignificant 0.036937 0.2946006 weaklyHypermeth 1 1.00000 insignificant 0.0071398 0.7049347 insignificant 1 insignificant 0.773137 0.73131 0.0480023 15 0.735000 0.64885 0.0861536 2.4817e-05 7.2604e-01 weaklyHypermeth 8.5576e-04 1.0000e+00 weaklyHypermeth 3.9417e-03 6.3875e-01 weaklyHypermeth 1.1945e-01 1.0000000 insignificant 0.02752984 0.11900575 insignificant 1.00000 insignificant 0.773137 0.80931 -0.0515964 16 0.735000 0.82754 -0.0925374 1.0000e+00 3.2422e-04 weaklyHypometh 1.0000000 2.4940e-02 weaklyHypometh 0.9999652 6.6268e-04 weaklyHypometh 1.00000 0.110447 insignificant -0.07051172 1.8457e-02 weaklyHypometh 0.7382713 insignificant 0.75981 0.73131 0.0371516 16 0.716438 0.64885 0.06759148 2.7605e-02 0.96773059 weaklyHypermeth 3.4506e-01 1.000000 insignificant 1.9917e-01 0.8567084 insignificant 1.0000e+00 1.00000 insignificant 0.02039001 0.32945579 insignificant 1.000000 insignificant 0.75981 0.80931 -0.0565719 16 0.716438 0.82754 -0.1110995 9.9998e-01 1.9435e-06 weaklyHypometh 1.00000000 0.00087209 weaklyHypometh 0.99940864 5.6042e-05 weaklyHypometh 1.000000 0.021726 weaklyHypometh -0.07765155 0.0129735 weaklyHypometh 0.99796 insignificant 0.73131 0.80931 -0.1037317 15 0.64885 0.82754 -0.1786910 0.99927 1.6216e-05 weaklyHypometh 1 1.1583e-03 weaklyHypometh 0.994023 1.8057e-04 weaklyHypometh 1 0.0225715 weaklyHypometh -0.0980416 0.0042568 weaklyHypometh 0.53210 insignificant chrX 41126740 41127740 58133 ENSG00000223278 0.64468 212 5 0.781667 88 5 0.74701 131 5 0.6818182 66 5 0.583492 58 5 0.706429 102 5 0.5810559 106 5 0.67304 80 5 0.68150 79 5 0.694505 69 5 0.65523 123 5 0.706593 46 3 0.636945 92 5 NA 0 0 0.539048 73 5 0.718873 62 5 0.652051 64 5 0.7571429 52 5 0.6620728 93 5 0.7305108 119 5 0.73333 19 2 0.742778 46 5 0.674897 136 5 0.74515 54 5 0.74626 40 5 0.71341 85 5 0.79254 64 5 0.83000 42 5 0.64287 55 5 0.728333 135 5 0.68267 114 5 0.7524798 274 5 0.659341 66 5 0.731136 82 5 0.7714286 76 5 0.760000 54 5 0.685000 36 5 0.73393 86 5 0.72067 149 5 0.710537 156 5 0.73277 136 5 0.70092 168 5 0.778606 125 5 0.59751 0.742793 0.70386 0.636364 0.550708 0.668533 0.58154272 0.64544 0.63217 0.677458 0.61283 0.6557767 0.6209801 NA 0.5360360 0.683956 0.62231 0.7104247 0.637066 0.701762 0.684685 0.706607 0.634483 0.70844 0.69975 0.67284 0.75416 0.80000 0.60912 0.682779 0.64005 0.7200213 0.606623 0.703990 0.72586873 0.724324 0.655405 0.69643 0.67765 0.667881 0.69522 0.65832 0.736389 3 0.671720 0.706767 -4.6302e-02 5 0.674538 0.722064 -4.7526e-02 0.994861 1.7121e-02 weaklyHypometh 1 1.0000e+00 insignificant 0.992641 0.0172414 weaklyHypometh 1 1.00000 insignificant -0.0566046 0.0100383 lowCoverage 1 lowCoverage 0.671720 0.74500 -0.0515387 5 0.674538 0.72372 -0.0491786 9.9322e-01 2.6103e-02 weaklyHypometh 1.0000e+00 1.0000e+00 insignificant 9.9256e-01 2.6923e-02 weaklyHypometh 1.0000e+00 1.0000000 insignificant -0.04801652 0.05608306 lowCoverage 1.00000 lowCoverage 0.671720 0.69074 -0.0498012 5 0.674538 0.72577 -0.0512328 9.3587e-01 3.0157e-02 weaklyHypometh 1.0000000 9.7280e-01 insignificant 0.9542138 3.3047e-02 weaklyHypometh 1.00000 1.000000 insignificant -0.05324455 1.7157e-02 lowCoverage 0.7382713 lowCoverage 0.70677 0.74500 -0.0029841 5 0.722064 0.72372 -0.00165284 7.8734e-01 0.31356869 insignificant 1.0000e+00 1.000000 insignificant 7.0421e-01 0.3117554 insignificant 1.0000e+00 1.00000 insignificant 0.00858812 0.71494551 lowCoverage 1.000000 lowCoverage 0.70677 0.69074 -0.0021082 5 0.722064 0.72577 -0.0037071 7.3731e-01 1.3815e-01 insignificant 1.00000000 1.00000000 insignificant 0.58920724 4.2992e-01 insignificant 1.000000 1.000000 insignificant 0.00336010 0.8687950 lowCoverage 1.00000 lowCoverage 0.74500 0.69074 -0.0028966 5 0.72372 0.72577 -0.0020542 0.32654 4.2416e-01 insignificant 1 1.0000e+00 insignificant 0.141105 7.4554e-01 insignificant 1 1.0000000 insignificant -0.0052280 0.8199245 insignificant 1.00000 insignificant chrX 44629640 44630640 58161 KDM6A ENSG00000147050 0.71331 149 5 0.814286 85 5 0.74284 79 5 0.7875000 76 5 0.875000 35 4 0.714192 216 5 0.8071429 74 5 0.72065 98 5 0.80986 91 5 0.811905 67 5 0.74881 128 5 0.737193 66 5 0.756667 92 5 NA 0 0 0.722222 40 5 0.650000 37 5 0.719231 61 5 0.8000000 68 5 0.7091109 174 5 0.7626745 172 5 0.74889 54 5 0.808645 53 4 0.706236 55 4 0.76853 78 5 0.83619 31 5 0.74388 140 5 0.83297 55 5 0.71667 36 4 0.69296 73 5 0.744077 110 5 0.78828 182 5 0.7273206 244 5 0.686364 101 5 0.781793 106 5 0.7517037 85 4 0.732967 68 5 0.636778 71 5 0.73643 159 5 0.75843 188 5 0.740000 111 5 0.76635 117 5 0.82038 136 5 0.708927 88 5 0.69669 0.786378 0.72081 0.754972 0.857955 0.696400 0.80463677 0.67954 0.78265 0.801786 0.73475 0.7079844 0.7307449 NA 0.6843434 0.626015 0.71176 0.7727273 0.674310 0.736495 0.737689 0.780657 0.668968 0.73992 0.83544 0.70798 0.80962 0.69871 0.68087 0.720020 0.77227 0.7075189 0.637676 0.749782 0.72579966 0.687812 0.624227 0.70172 0.73877 0.703125 0.75421 0.80803 0.692491 4 0.745575 0.738974 -4.2943e-03 5 0.747495 0.751173 -3.6771e-03 0.618003 5.3028e-01 insignificant 1 1.0000e+00 insignificant 0.531174 0.6672967 insignificant 1 1.00000 insignificant -0.0015217 0.9348182 lowCoverage 1 lowCoverage 0.745575 0.71864 0.0242951 5 0.747495 0.72481 0.0226828 1.5315e-01 8.1077e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.5718e-02 8.0303e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.03702525 0.16366079 lowCoverage 1.00000 lowCoverage 0.745575 0.78906 -0.0128934 5 0.747495 0.75973 -0.0122325 8.1875e-01 1.5949e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.4472527 4.9398e-01 insignificant 1.00000 1.000000 insignificant -0.00078569 9.7233e-01 lowCoverage 1.0000000 lowCoverage 0.73897 0.71864 0.0319928 5 0.751173 0.72481 0.02635998 8.8454e-02 0.74207875 insignificant 8.9347e-01 1.000000 insignificant 1.0794e-01 0.6670265 insignificant 1.0000e+00 1.00000 insignificant 0.03854692 0.15903326 lowCoverage 1.000000 lowCoverage 0.73897 0.78906 -0.0097885 5 0.751173 0.75973 -0.0085554 7.6776e-01 1.0111e-01 insignificant 1.00000000 1.00000000 insignificant 0.46678932 2.0489e-01 insignificant 1.000000 1.000000 insignificant 0.00073598 0.9751216 lowCoverage 1.00000 lowCoverage 0.71864 0.78906 -0.0368059 5 0.72481 0.75973 -0.0349153 0.82477 5.4501e-02 insignificant 1 6.6465e-01 insignificant 0.497444 9.3276e-02 insignificant 1 1.0000000 insignificant -0.0378109 0.2083586 lowCoverage 1.00000 lowCoverage chrX 48585045 48586045 58226 PCSK1N ENSG00000102109 0.74192 317 10 0.722121 94 8 0.63890 104 5 0.6433303 240 9 0.644211 67 5 0.729861 196 10 0.7234452 95 4 0.73993 103 4 0.67893 97 4 0.868036 100 4 0.75115 214 8 0.507668 51 3 0.800538 113 4 0.835714 27 3 0.836699 110 4 0.746964 50 3 0.721289 65 3 0.6643303 298 9 0.7569534 156 8 0.7206898 173 11 0.73746 50 4 0.680182 67 6 0.795297 189 10 0.79018 47 5 0.69841 86 6 0.80578 163 11 0.90104 35 3 0.77667 38 4 0.75061 110 4 0.791954 247 9 0.76665 206 12 0.7649814 208 11 0.569983 83 5 0.565721 104 6 0.5857171 144 8 0.647348 62 7 0.705556 91 4 0.73628 194 9 0.70520 267 11 0.807982 275 10 0.75613 260 9 0.80834 230 9 0.711334 239 11 0.64600 0.637371 0.56098 0.595538 0.635265 0.688889 0.61755486 0.68026 0.56768 0.708485 0.63173 0.6657277 0.6521994 0.746753 0.6314057 0.608024 0.54384 0.6958981 0.670202 0.626263 0.624841 0.637433 0.646970 0.67100 0.74690 0.61392 0.75000 0.74899 0.72540 0.710274 0.67518 0.5628668 0.531633 0.588765 0.30722813 0.489015 0.664646 0.62343 0.64656 0.700725 0.73713 0.69706 0.622010 3 0.666917 0.728907 -4.2009e-02 10 0.755205 0.797411 -4.2206e-02 0.999728 1.4621e-03 weaklyHypometh 1 2.9241e-01 insignificant 0.993059 0.1197584 insignificant 1 1.00000 insignificant -0.0479672 0.0592675 insignificant 1 insignificant 0.666667 0.59440 0.1026855 7 0.736375 0.65824 0.0781331 3.2891e-08 9.9904e-01 weaklyHypermeth 1.5662e-06 1.0000e+00 weaklyHypermeth 2.8466e-04 9.9937e-01 weaklyHypermeth 1.4982e-02 1.0000000 weaklyHypermeth 0.08853376 0.03223282 weaklyHypermeth 1.00000 insignificant 0.666667 0.69534 -0.0431223 10 0.736375 0.77127 -0.0348904 9.2645e-01 3.1537e-03 weaklyHypometh 1.0000000 1.6598e-01 insignificant 0.5838559 3.2388e-02 weaklyHypometh 1.00000 1.000000 insignificant -0.03416513 2.6393e-01 insignificant 1.0000000 insignificant 0.72853 0.59440 0.1401917 7 0.781827 0.65824 0.12358535 1.0248e-08 0.99976203 weaklyHypermeth 9.3166e-07 1.000000 weaklyHypermeth 4.0356e-05 0.9998734 weaklyHypermeth 3.6687e-03 1.00000 weaklyHypermeth 0.13650098 0.00383273 weaklyHypermeth 0.273766 insignificant 0.72853 0.69534 -0.0008906 10 0.781827 0.77127 0.0105619 1.9120e-01 4.8864e-01 insignificant 1.00000000 1.00000000 insignificant 0.17726413 2.7777e-01 insignificant 1.000000 1.000000 insignificant 0.01380209 0.6299694 insignificant 1.00000 insignificant 0.59440 0.69534 -0.1453342 7 0.65824 0.77127 -0.1130234 1.00000 5.0427e-11 weaklyHypometh 1 5.0427e-08 weaklyHypometh 0.999609 2.0335e-05 weaklyHypometh 1 0.0067785 weaklyHypometh -0.1226989 0.0098327 weaklyHypometh 0.67493 insignificant chrX 48704046 48705046 58231 ENSG00000223309 0.94941 142 5 0.904762 36 2 0.72484 56 5 0.9531746 99 5 0.898413 56 5 0.919171 107 5 0.9532468 44 5 0.93788 65 5 0.83445 78 5 0.649130 100 5 0.93831 107 6 0.866667 18 2 0.860507 143 6 0.903846 44 5 1.000000 41 5 1.000000 8 0 0.966667 23 3 0.8952020 117 5 0.9567308 71 5 0.8590887 202 5 0.68571 20 1 0.772100 95 5 0.965152 55 5 0.96667 39 5 0.94203 91 5 0.92944 90 5 0.95061 118 5 0.77247 33 4 0.92614 76 5 0.966923 81 5 0.95311 78 5 0.9215394 146 5 0.765783 47 4 0.916364 89 5 0.0000000 1 0 0.776190 19 2 0.691468 46 5 0.96909 79 5 0.90809 101 5 0.950000 62 5 0.93944 117 5 0.93499 105 5 0.878755 47 5 0.95678 0.976190 0.77128 0.945469 0.874313 0.883801 0.95643067 0.94770 0.95338 0.907827 0.93658 0.8853047 0.9064014 0.900882 1.0000000 0.953644 0.96774 0.9481101 0.938637 0.858465 0.933333 0.886317 0.971896 0.96774 0.89939 0.88410 0.93268 0.81090 0.89699 0.965301 0.95046 0.9028522 0.832478 0.914370 NA 0.748848 0.727407 0.96027 0.89724 0.963262 0.93025 0.89972 0.873863 1 0.908157 0.912148 -7.8066e-03 5 0.813653 0.856762 -4.3109e-02 0.662534 2.8945e-01 insignificant 1 1.0000e+00 insignificant 0.656745 0.5011415 insignificant 1 1.00000 insignificant 0.0025828 0.9395930 lowCoverage 1 lowCoverage 0.908157 0.85765 0.0458707 5 0.813653 0.70993 0.1037267 6.2826e-03 8.4197e-01 weaklyHypermeth 8.9751e-02 1.0000e+00 weaklyHypermeth 1.8166e-02 7.7496e-01 weaklyHypermeth 4.1286e-01 1.0000000 insignificant 0.21209225 0.20103589 lowCoverage 1.00000 lowCoverage 0.909266 0.91435 -0.0016742 5 0.893706 0.92739 -0.0336836 6.2966e-01 3.7908e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.4645720 7.6384e-01 insignificant 1.00000 1.000000 insignificant -0.02368057 3.1918e-01 lowCoverage 1.0000000 lowCoverage 0.91215 0.85765 0.0536941 5 0.856762 0.70993 0.14683615 5.6582e-02 0.97816164 insignificant 6.4298e-01 1.000000 insignificant 6.1798e-02 0.9450284 insignificant 8.9562e-01 1.00000 insignificant 0.20950948 0.20735962 lowCoverage 1.000000 lowCoverage 0.91376 0.91435 0.0038343 5 0.888445 0.92739 -0.0389447 7.3438e-01 6.2834e-01 insignificant 1.00000000 1.00000000 insignificant 0.62379795 7.6456e-01 insignificant 1.000000 1.000000 insignificant -0.02626335 0.4028896 lowCoverage 1.00000 lowCoverage 0.86071 0.91435 -0.0480633 5 0.82825 0.92739 -0.0991425 0.91580 9.1678e-02 insignificant 1 9.8579e-01 insignificant 0.771595 1.7924e-01 insignificant 1 1.0000000 insignificant -0.2357728 0.1619059 lowCoverage 1.00000 lowCoverage chrX 48918923 48919923 58234 PLP2 ENSG00000102007 0.95696 288 13 0.891161 192 13 0.84871 284 13 0.9350233 244 12 0.775712 180 12 0.899358 174 11 0.9160991 190 12 0.82809 276 13 0.91488 212 13 0.808915 342 13 0.91089 373 13 0.922494 64 7 0.897311 523 13 0.909877 72 9 0.865358 193 13 0.778571 36 4 0.893906 90 8 0.9190650 280 9 0.9272348 351 13 0.8694934 247 13 0.66905 61 7 0.533333 82 5 0.887713 93 8 0.79957 141 13 0.86153 146 9 0.93288 372 13 0.90032 159 12 0.82605 81 6 0.82548 368 13 0.933967 277 13 0.91824 359 13 0.9103490 369 14 0.811517 164 10 0.821870 358 13 0.4090543 409 7 0.762827 56 4 0.766960 82 9 0.76477 387 13 0.95515 358 13 0.949795 201 13 0.96212 340 9 0.96281 321 13 0.963849 265 13 0.90869 0.881944 0.78067 0.919240 0.807883 0.877377 0.93036931 0.85924 0.88681 0.849103 0.95412 0.9314134 0.8869365 0.878340 0.8781776 0.835356 0.88601 0.8672841 0.962343 0.863350 0.621438 0.744148 0.934363 0.93824 0.84881 0.95456 0.86651 0.84586 0.83474 0.835502 0.86724 0.8918693 0.662789 0.752913 0.48675460 0.669724 0.621693 0.77684 0.92609 0.892905 0.94360 0.93829 0.931160 3 0.903191 0.898724 3.0450e-03 13 0.870100 0.849411 2.0690e-02 0.460150 6.4661e-01 insignificant 1 1.0000e+00 insignificant 0.111906 0.9316296 insignificant 1 1.00000 insignificant 0.0502486 0.1924619 insignificant 1 insignificant 0.903499 0.68475 0.2133650 11 0.886114 0.75672 0.1293963 2.7633e-15 9.9999e-01 hypermethylated 4.6054e-13 1.0000e+00 hypermethylated 3.4266e-04 9.9786e-01 hypermethylated 1.6317e-02 1.0000000 hypermethylated 0.16062240 0.05253773 insignificant 1.00000 insignificant 0.903457 0.94074 -0.0396539 13 0.877979 0.96051 -0.0825331 9.6395e-01 4.4093e-06 weaklyHypometh 1.0000000 7.1081e-04 weaklyHypometh 0.8923675 3.4766e-05 weaklyHypometh 1.00000 0.034766 weaklyHypometh -0.07528945 2.4979e-06 weaklyHypometh 0.0012490 weaklyHypometh 0.89900 0.68475 0.2066752 11 0.862665 0.75672 0.10594781 1.8834e-09 0.99950038 hypermethylated 2.0927e-07 1.000000 hypermethylated 9.5503e-03 0.9527212 weaklyHypermeth 2.1236e-01 1.00000 insignificant 0.11037381 0.16596134 insignificant 1.000000 insignificant 0.89932 0.94074 -0.0458779 13 0.888570 0.96051 -0.0719422 9.9776e-01 9.6243e-04 weaklyHypometh 1.00000000 0.12030327 insignificant 0.97951841 1.0844e-05 weaklyHypometh 1.000000 0.010844 weaklyHypometh -0.12553804 0.0041018 weaklyHypometh 0.51272 insignificant 0.68454 0.94074 -0.2936723 11 0.73934 0.96051 -0.2211720 0.99617 1.9152e-10 hypomethylated 1 9.5759e-08 hypomethylated 0.959445 3.1494e-06 hypomethylated 1 0.0021184 hypomethylated -0.2359119 0.0138419 weaklyHypometh 0.67493 insignificant chrX 49491554 49492554 58242 PAGE4 ENSG00000101951 0.75590 106 5 0.832175 95 5 0.69773 50 5 0.7162393 62 5 0.625000 27 2 0.782910 173 5 0.7500000 33 4 0.69667 71 5 0.79921 39 5 0.750000 41 5 0.70572 206 5 0.300000 14 0 0.684219 67 5 0.725000 31 5 0.686111 42 5 0.333333 9 0 1.000000 1 0 0.7201299 61 5 0.6982784 78 5 0.7282375 203 5 0.40317 35 5 0.774286 42 5 0.721065 61 4 0.72534 72 5 0.73000 71 5 0.71852 124 5 0.61405 83 5 0.73162 43 2 0.55627 77 3 0.661231 102 5 0.72412 126 5 0.5976086 201 5 0.595960 87 5 0.280952 40 5 0.5807018 62 3 0.666667 9 0 0.563824 96 6 0.71880 94 5 0.66062 88 5 0.646722 84 5 0.69769 133 5 0.58571 37 5 0.709006 84 5 0.75212 0.782862 0.70605 0.703532 0.688755 0.746849 0.71084337 0.67369 0.79767 0.908635 0.74540 0.3253012 0.6881151 0.730723 0.6546185 0.491066 NA 0.7263339 0.690913 0.675974 0.504188 0.766954 0.644244 0.72318 0.72771 0.66591 0.62014 0.77105 0.55022 0.775440 0.68294 0.7039798 0.531998 0.292312 0.58539421 0.614361 0.575767 0.67390 0.69251 0.648416 0.65423 0.58197 0.644920 0 0.728886 0.695275 4.3671e-02 5 0.710440 0.659522 5.0919e-02 0.033918 9.7378e-01 weaklyHypermeth 1 1.0000e+00 insignificant 0.111122 0.9718550 insignificant 1 1.00000 insignificant 0.0362357 0.4314343 lowCoverage 1 lowCoverage 0.728886 0.55412 0.1783591 5 0.710440 0.57952 0.1309223 2.7547e-08 9.7351e-01 weaklyHypermeth 1.4498e-06 1.0000e+00 weaklyHypermeth 5.4039e-04 9.5994e-01 weaklyHypermeth 2.1615e-02 1.0000000 weaklyHypermeth 0.13152452 0.09912397 lowCoverage 1.00000 lowCoverage 0.728886 0.63615 0.0863966 5 0.710440 0.66116 0.0492815 3.5737e-03 9.6946e-01 weaklyHypermeth 0.2233556 1.0000e+00 insignificant 0.0163990 9.7554e-01 weaklyHypermeth 1.00000 1.000000 insignificant 0.03939220 3.3898e-01 lowCoverage 1.0000000 lowCoverage 0.69527 0.55412 0.1335349 5 0.659522 0.57952 0.08000377 2.1278e-05 0.90615315 weaklyHypermeth 6.6495e-04 1.000000 weaklyHypermeth 1.4166e-03 0.8925222 weaklyHypermeth 4.7221e-02 1.00000 weaklyHypermeth 0.09528885 0.20797543 lowCoverage 1.000000 lowCoverage 0.69527 0.63615 0.0422499 5 0.659522 0.66116 -0.0016371 1.7418e-01 7.7436e-01 insignificant 1.00000000 1.00000000 insignificant 0.27410501 8.1077e-01 insignificant 1.000000 1.000000 insignificant 0.00315653 0.9337805 lowCoverage 1.00000 lowCoverage 0.55412 0.63615 -0.0913435 5 0.57952 0.66116 -0.0816409 0.48002 6.6700e-03 weaklyHypometh 1 1.3481e-01 insignificant 0.535914 1.7116e-02 weaklyHypometh 1 0.4625874 insignificant -0.0921323 0.2098660 lowCoverage 1.00000 lowCoverage chrX 55560654 55561654 58285 USP51 ENSG00000185295 0.87792 98 7 0.764261 125 5 0.69548 103 6 1.0000000 23 1 0.959184 33 3 0.846131 92 7 0.8549784 51 5 0.83395 81 7 0.84688 46 7 0.787500 65 5 0.80603 179 7 1.000000 2 0 0.817460 42 5 0.787500 17 1 0.952381 13 0 0.400000 5 0 0.000000 1 0 0.7291667 22 2 0.9532967 90 7 0.8439522 223 7 0.70952 19 2 0.616667 16 2 0.881845 53 6 0.76786 27 2 0.41667 8 0 0.86252 228 8 0.77338 45 3 0.91156 36 3 0.80600 114 5 0.930224 128 7 0.80147 198 7 0.7365051 247 7 0.367522 107 6 0.336806 32 1 0.5247715 281 8 0.888889 5 0 0.423846 64 5 0.64173 158 8 0.73407 125 5 0.759137 69 4 0.53492 33 3 0.72619 18 0 0.885259 36 3 0.84301 0.736228 0.70030 1.000000 0.949580 0.786625 0.81862745 0.78466 0.76324 0.905882 0.82645 NA 0.7689542 0.891176 0.9411765 0.349020 NA 0.8235294 0.967760 0.812034 0.714706 0.666450 0.896919 0.73162 0.55910 0.83394 0.69252 0.98179 0.77687 0.945241 0.74317 0.8517354 0.216823 0.324632 0.49049327 0.700747 0.300126 0.61604 0.72863 0.693584 0.52614 0.65441 0.934232 0 0.836266 0.845398 4.4626e-03 5 0.834501 0.840326 -5.8256e-03 0.778961 4.2069e-01 insignificant 1 1.0000e+00 insignificant 0.063587 0.9291614 insignificant 1 1.00000 insignificant 0.0199512 0.7622683 lowCoverage 1 lowCoverage 0.836266 0.53787 0.2838497 5 0.834501 0.50544 0.3290645 2.8014e-21 9.9999e-01 hypermethylated 9.3379e-19 1.0000e+00 hypermethylated 6.5441e-10 1.0000e+00 hypermethylated 3.2720e-07 1.0000000 hypermethylated 0.25720865 0.02898792 lowCoverage 1.00000 lowCoverage 0.836266 0.77224 0.0887551 4 0.834501 0.69262 0.1418811 2.3532e-06 9.9933e-01 lowCoverage 0.0007844 1.0000e+00 lowCoverage 0.0053610 9.9113e-01 lowCoverage 0.76586 1.000000 lowCoverage 0.05988780 4.4505e-01 lowCoverage 1.0000000 lowCoverage 0.84540 0.53787 0.2654929 5 0.840326 0.50544 0.33489009 1.5772e-15 0.99813346 hypermethylated 3.9430e-13 1.000000 hypermethylated 1.5414e-05 0.9996743 hypermethylated 2.0100e-03 1.00000 hypermethylated 0.23725750 0.03820983 lowCoverage 0.931947 lowCoverage 0.84540 0.77224 0.0837082 4 0.840326 0.69262 0.1477067 4.2593e-05 9.9373e-01 lowCoverage 0.00709887 1.00000000 lowCoverage 0.14330796 9.1230e-01 lowCoverage 1.000000 1.000000 lowCoverage 0.03993664 0.5805254 lowCoverage 1.00000 lowCoverage 0.53787 0.77224 -0.1903716 4 0.50544 0.69262 -0.1871833 0.98865 7.9920e-05 lowCoverage 1 4.4400e-03 lowCoverage 0.999484 5.0664e-03 lowCoverage 1 0.2081669 lowCoverage -0.1973209 0.0870864 lowCoverage 1.00000 lowCoverage chrX 67614954 67615954 58343 ENSG00000219134 0.81397 156 5 0.851559 87 6 0.78490 46 5 0.7757353 78 5 0.857143 9 1 0.778571 94 5 0.6000000 5 1 1.00000 9 1 0.58333 5 0 0.916667 8 1 0.90385 34 2 0.666667 3 0 0.906250 18 1 NA 0 0 1.000000 5 0 NA 0 0 0.700000 7 1 0.7736630 88 5 0.9642857 31 1 0.8338207 84 5 1.00000 4 0 1.000000 5 0 0.809967 71 4 0.83333 8 1 1.00000 5 0 0.77014 79 6 0.87500 11 1 1.00000 2 0 1.00000 10 1 0.803571 26 1 0.84351 133 6 0.7902880 156 5 0.761405 63 5 0.785714 21 2 0.7536325 87 6 1.000000 1 0 1.000000 3 0 0.78150 102 6 0.80947 80 5 0.825877 86 5 0.77242 87 5 0.74758 108 5 0.770206 130 5 0.90000 1.000000 0.85714 1.000000 1.000000 1.000000 NA 1.00000 0.66667 1.000000 1.00000 NA 1.0000000 NA 1.0000000 NA 1.00000 1.0000000 1.000000 1.000000 1.000000 1.000000 0.750000 0.66667 1.00000 0.71429 0.75000 NA 1.00000 0.571429 1.00000 0.8888889 1.000000 1.000000 0.90000000 1.000000 1.000000 0.84615 1.00000 1.000000 0.87500 1.00000 1.000000 0 0.780965 0.780392 -5.9041e-03 5 0.793417 0.800179 -6.7620e-03 0.163729 3.7957e-02 weaklyHypometh 1 1.0000e+00 insignificant 0.459303 0.0476260 weaklyHypometh 1 1.00000 insignificant -0.0765723 0.0695739 lowCoverage 1 lowCoverage 0.780965 0.71841 0.0515948 6 0.793417 0.73921 0.0542070 5.4295e-03 6.3749e-01 weaklyHypermeth 8.5918e-02 1.0000e+00 weaklyHypermeth 3.5282e-01 5.8903e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.02979724 0.61216578 lowCoverage 1.00000 lowCoverage 0.780965 0.72709 0.0235094 5 0.793417 0.80258 -0.0091628 4.7524e-01 4.5475e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.7495802 4.7138e-01 insignificant 1.00000 1.000000 insignificant 0.03213341 3.3405e-01 lowCoverage 1.0000000 lowCoverage 0.78039 0.71841 0.0402926 5 0.800179 0.73921 0.06096897 2.1176e-03 0.50440174 weaklyHypermeth 3.6510e-02 1.000000 weaklyHypermeth 1.6495e-01 0.6329475 insignificant 1.0000e+00 1.00000 insignificant 0.04677511 0.42766219 lowCoverage 1.000000 lowCoverage 0.78039 0.72709 0.0162895 5 0.800179 0.80258 -0.0024008 4.6196e-01 3.9716e-01 insignificant 1.00000000 1.00000000 insignificant 0.60621272 5.1606e-01 insignificant 1.000000 1.000000 insignificant 0.10870576 0.0036405 lowCoverage 0.51272 lowCoverage 0.71841 0.72709 0.0210035 5 0.73921 0.80258 -0.0633697 0.43787 8.2823e-02 insignificant 1 9.2026e-01 insignificant 0.302487 4.8046e-01 insignificant 1 1.0000000 insignificant 0.0619307 0.2685253 lowCoverage 1.00000 lowCoverage chrX 67822654 67823654 58354 STARD8 ENSG00000130052 0.35861 906 29 0.027646 539 30 0.20732 920 31 0.0124640 557 21 0.265998 437 30 0.078681 927 28 0.0237666 1240 31 0.27939 640 28 0.26359 867 29 0.286986 957 31 0.38593 802 31 0.027674 704 31 0.012784 1295 31 0.029446 164 11 0.026549 884 30 0.033464 418 27 0.148009 784 30 0.0031102 731 27 0.0143316 589 30 0.2835801 1011 30 0.10694 155 11 0.056641 513 23 0.053055 500 30 0.18892 433 27 0.26409 429 22 0.18970 988 31 0.21775 561 32 0.24316 464 31 0.33262 613 28 0.020021 729 31 0.24797 825 31 0.3819155 1263 31 0.016424 440 28 0.187498 706 30 0.2717476 310 12 0.276647 316 25 0.056118 276 24 0.19763 858 31 0.38213 1336 29 0.058431 802 29 0.24257 1106 28 0.40959 895 29 0.040036 816 24 0.32642 0.012813 0.20051 0.010957 0.244569 0.023299 0.02666219 0.26037 0.23158 0.276211 0.36018 0.0248512 0.0164969 0.082072 0.0292561 0.028763 0.20775 0.0081245 0.015254 0.276779 0.070499 0.030717 0.025790 0.20412 0.25738 0.16575 0.17173 0.27520 0.30509 0.028232 0.26421 0.3725689 0.022322 0.201163 0.18475047 0.240828 0.044707 0.17532 0.35135 0.027644 0.29665 0.37480 0.010072 21 0.146500 0.219640 -7.4276e-02 31 0.154364 0.220995 -6.6631e-02 1.000000 7.2124e-09 weaklyHypometh 1 7.2124e-06 weaklyHypometh 1.000000 0.0014630 weaklyHypometh 1 0.73150 insignificant -0.0534319 0.2427200 insignificant 1 insignificant 0.146464 0.15157 -0.0118085 29 0.148941 0.16364 -0.0146978 8.7301e-01 4.8772e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 8.7712e-01 8.5583e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.02921180 0.59932436 insignificant 1.00000 insignificant 0.146473 0.23484 -0.0959084 28 0.153595 0.25617 -0.1025751 1.0000e+00 4.7992e-08 weaklyHypometh 1.0000000 1.7020e-05 weaklyHypometh 0.9999985 2.1261e-03 weaklyHypometh 1.00000 0.193280 insignificant -0.08808554 3.3736e-01 insignificant 1.0000000 insignificant 0.21911 0.15141 0.0593439 29 0.207274 0.15000 0.05727223 1.0883e-03 0.99997165 weaklyHypermeth 2.0929e-02 1.000000 weaklyHypermeth 4.6985e-02 0.9999884 weaklyHypermeth 7.5782e-01 1.00000 insignificant 0.02422014 0.66998166 insignificant 1.000000 insignificant 0.21927 0.23491 -0.0277113 28 0.205290 0.24623 -0.0409353 9.9766e-01 3.8446e-01 insignificant 1.00000000 1.00000000 insignificant 0.99949487 5.9650e-01 insignificant 1.000000 1.000000 insignificant -0.03465359 0.6969799 insignificant 1.00000 insignificant 0.15127 0.23501 -0.0890485 28 0.14714 0.25326 -0.1061155 1.00000 1.3758e-03 weaklyHypometh 1 4.3937e-02 weaklyHypometh 0.999998 1.8292e-01 insignificant 1 1.0000000 insignificant -0.0588737 0.5337411 insignificant 1.00000 insignificant chrX 73462154 73463154 58407 ZCCHC13 ENSG00000187969 0.36771 164 8 0.210449 123 8 0.42498 182 9 0.3688223 179 6 0.349003 64 5 0.442566 891 9 0.2597526 156 9 0.31223 114 6 0.37542 109 9 0.262678 140 9 0.32597 196 7 0.250824 108 9 0.279526 125 8 NA 0 0 0.257609 100 7 0.377175 86 7 0.327729 493 9 0.3388442 173 7 0.3204100 121 7 0.4906920 596 9 0.35065 69 8 0.195258 129 7 0.255087 158 9 0.55718 113 7 0.37617 115 8 0.33732 184 7 0.38301 269 8 0.45833 77 6 0.32628 110 8 0.324169 203 9 0.39999 226 8 0.3602084 602 9 0.327991 107 7 0.254052 120 7 0.4750973 90 4 0.413499 76 8 0.363482 74 6 0.33256 229 9 0.34876 338 9 0.365512 188 8 0.27353 206 7 0.40155 199 8 0.410737 187 8 0.29215 0.187989 0.30874 0.248749 0.356902 0.452813 0.22518229 0.35316 0.31482 0.257990 0.27462 0.2140476 0.2332507 NA 0.1899920 0.357165 0.30484 0.2443160 0.249361 0.481934 0.244070 0.174297 0.227097 0.51697 0.36460 0.31901 0.34710 0.47002 0.30256 0.233371 0.33371 0.3395636 0.225234 0.275028 0.50159554 0.322666 0.288709 0.23782 0.29634 0.345593 0.23022 0.39219 0.305767 4 0.431796 0.352550 3.2213e-02 9 0.364021 0.358535 5.4860e-03 0.487492 8.0268e-01 insignificant 1 1.0000e+00 insignificant 0.930856 0.2192822 insignificant 1 1.00000 insignificant -0.0264932 0.4053481 insignificant 1 insignificant 0.431796 0.36638 0.0844319 8 0.364021 0.32834 0.0356763 2.6337e-03 8.9542e-01 weaklyHypermeth 4.7030e-02 1.0000e+00 weaklyHypermeth 5.0384e-01 8.4511e-01 insignificant 1.0000e+00 1.0000000 insignificant -0.02730409 0.46085409 insignificant 1.00000 insignificant 0.432919 0.33184 0.0507842 8 0.433804 0.36917 0.0646294 6.6408e-02 3.4301e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.5915707 9.8709e-02 insignificant 1.00000 1.000000 insignificant -0.02620587 3.9964e-01 insignificant 1.0000000 insignificant 0.35255 0.36638 0.0663599 8 0.358535 0.32834 0.03019025 9.6357e-03 0.92184565 weaklyHypermeth 1.4600e-01 1.000000 insignificant 1.6739e-01 0.9543770 insignificant 1.0000e+00 1.00000 insignificant -0.00081088 0.98448840 insignificant 1.000000 insignificant 0.35418 0.33184 0.0221258 8 0.410432 0.36917 0.0412576 1.2875e-01 7.1820e-01 insignificant 1.00000000 1.00000000 insignificant 0.36280633 8.2833e-01 insignificant 1.000000 1.000000 insignificant 0.00028735 0.9937530 insignificant 1.00000 insignificant 0.36919 0.33184 -0.0361391 8 0.34575 0.36917 -0.0234194 0.86930 1.6968e-01 insignificant 1 1.0000e+00 insignificant 0.930411 2.2513e-01 insignificant 1 1.0000000 insignificant 0.0010982 0.9784839 insignificant 1.00000 insignificant chrX 114820526 114821526 58706 ENSG00000218981 0.81890 684 21 0.778855 293 17 0.73046 239 15 0.8127049 493 21 0.724786 137 7 0.773795 397 19 0.5729234 209 12 0.76255 237 16 0.75928 130 16 0.744722 172 14 0.82839 412 15 0.565625 115 9 0.814048 255 16 0.849440 102 7 0.754340 126 16 0.585403 106 5 0.846190 475 8 0.7555254 499 21 0.7749938 170 11 0.8219617 401 19 0.86944 62 5 0.934722 93 9 0.874860 390 20 0.82380 122 11 0.78436 123 14 0.72776 373 18 0.77884 157 15 0.77061 75 5 0.80646 229 16 0.741516 340 18 0.80785 333 19 0.8405333 552 19 0.698208 237 18 0.668409 148 14 0.7813920 237 18 0.780627 60 3 0.755432 139 10 0.78574 366 19 0.76382 592 21 0.814221 615 20 0.86521 554 21 0.83680 561 21 0.862907 552 20 0.80736 0.763384 0.71667 0.834329 0.797884 0.847545 0.70852462 0.80256 0.72405 0.816242 0.78141 0.6222013 0.8993037 0.870144 0.7494909 0.618763 0.80552 0.8647715 0.732563 0.804587 0.867086 0.952893 0.943976 0.74557 0.87013 0.80856 0.87797 0.80197 0.77364 0.804477 0.80211 0.7517088 0.753494 0.676453 0.75885641 0.761591 0.771019 0.75107 0.80046 0.830662 0.86625 0.83950 0.862893 3 0.798334 0.827477 -2.5703e-02 21 0.738079 0.757225 -1.9146e-02 0.980770 1.8842e-01 insignificant 1 1.0000e+00 insignificant 0.999530 0.1361531 insignificant 1 1.00000 insignificant -0.0596508 0.0274269 weaklyHypometh 1 insignificant 0.799039 0.74810 0.0541604 16 0.775772 0.76712 0.0086496 2.6769e-04 9.9779e-01 weaklyHypermeth 6.3736e-03 1.0000e+00 weaklyHypermeth 6.7302e-02 9.9698e-01 insignificant 9.8084e-01 1.0000000 insignificant 0.00877615 0.75762514 insignificant 1.00000 insignificant 0.797870 0.86247 -0.0627048 21 0.751303 0.81970 -0.0683974 9.9965e-01 7.7520e-05 weaklyHypometh 1.0000000 7.7520e-03 weaklyHypometh 0.9998830 2.1685e-04 weaklyHypometh 1.00000 0.050255 weaklyHypometh -0.07484603 1.4503e-02 weaklyHypometh 0.7380208 insignificant 0.82839 0.74810 0.0716504 16 0.780467 0.76712 0.01334490 1.3353e-05 0.99999987 weaklyHypermeth 4.6044e-04 1.000000 weaklyHypermeth 3.1333e-03 0.9999996 weaklyHypermeth 8.5968e-02 1.00000 weaklyHypermeth 0.06842696 0.02466172 weaklyHypermeth 0.850404 insignificant 0.82705 0.86242 -0.0328491 21 0.724613 0.80736 -0.0827424 9.9979e-01 2.6191e-01 insignificant 1.00000000 1.00000000 insignificant 0.98754695 7.6385e-01 insignificant 1.000000 1.000000 insignificant -0.01519521 0.5617628 insignificant 1.00000 insignificant 0.74810 0.86343 -0.1021085 16 0.76712 0.86661 -0.0994856 1.00000 3.5955e-07 weaklyHypometh 1 5.1365e-05 weaklyHypometh 1.000000 1.1089e-03 weaklyHypometh 1 0.0924121 weaklyHypometh -0.0836222 0.0143353 weaklyHypometh 0.67493 insignificant chrX 118563396 118564396 58785 SLC25A5 ENSG00000005022 0.55139 99 5 0.645548 88 5 0.60390 59 5 0.6009524 112 5 0.620000 30 2 0.512214 161 5 0.6892857 39 5 0.75815 90 5 0.69333 54 5 0.863095 30 4 0.55076 177 5 0.466667 9 0 0.690476 47 2 0.722222 44 5 0.500947 67 5 0.440000 13 2 0.833333 6 0 0.5894345 100 5 0.8147727 95 5 0.6371115 108 5 0.58333 15 2 0.615955 30 2 0.803030 49 5 0.38946 28 3 0.80556 22 2 0.65115 102 5 0.70227 40 2 0.72222 10 0 0.67096 75 5 0.570552 134 5 0.67623 119 5 0.8115575 195 5 0.506548 106 5 0.423864 55 5 0.6328556 119 5 0.500000 12 0 0.450980 51 5 0.68869 90 5 0.71583 107 5 0.702213 107 5 0.67879 107 5 0.66750 62 5 0.677895 125 5 0.67727 0.653352 0.73931 0.693027 0.595238 0.643837 0.81962160 0.76626 0.72619 0.880846 0.72180 0.6250000 0.7108844 0.822421 0.7055601 0.589286 0.81318 0.6506165 0.787033 0.698968 0.725165 0.734441 0.709957 0.64371 0.70532 0.68043 0.64690 0.67262 0.71282 0.699770 0.70684 0.7047973 0.721949 0.534903 0.70870873 0.514881 0.559174 0.70477 0.74404 0.790817 0.71402 0.71272 0.767374 0 0.671569 0.673993 -2.5577e-03 5 0.603718 0.629779 -2.6061e-02 0.496678 2.8788e-01 insignificant 1 1.0000e+00 insignificant 0.695339 0.1968784 insignificant 1 1.00000 insignificant -0.0276762 0.5344124 lowCoverage 1 lowCoverage 0.671569 0.62587 0.0464218 5 0.603718 0.45298 0.1507347 2.0611e-02 9.8978e-01 weaklyHypermeth 2.6090e-01 1.0000e+00 insignificant 2.3049e-02 9.9515e-01 weaklyHypermeth 4.8382e-01 1.0000000 insignificant 0.10535660 0.06503302 lowCoverage 1.00000 lowCoverage 0.671569 0.69882 -0.0335389 5 0.603718 0.68368 -0.0799648 9.6844e-01 1.7108e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.9757661 4.1195e-01 insignificant 1.00000 1.000000 insignificant -0.04926594 9.5240e-02 lowCoverage 1.0000000 lowCoverage 0.67399 0.62587 0.0489355 5 0.629779 0.45298 0.17679542 1.0206e-02 0.97628265 weaklyHypermeth 1.5009e-01 1.000000 insignificant 1.6429e-02 0.9986046 weaklyHypermeth 3.0425e-01 1.00000 insignificant 0.13303283 0.03321302 lowCoverage 0.906645 lowCoverage 0.67399 0.69882 -0.0313710 5 0.629779 0.68368 -0.0539041 6.8919e-01 4.8959e-02 weaklyHypometh 1.00000000 1.00000000 insignificant 0.57177528 3.5556e-01 insignificant 1.000000 1.000000 insignificant -0.02158971 0.5579024 lowCoverage 1.00000 lowCoverage 0.62587 0.69882 -0.0796337 5 0.45298 0.68368 -0.2306995 0.99967 1.5257e-01 insignificant 1 1.0000e+00 insignificant 0.999541 4.1747e-02 weaklyHypometh 1 0.7454815 insignificant -0.1546225 0.0143110 lowCoverage 0.67493 lowCoverage chrX 118696696 118697696 58788 MIR766 ENSG00000211578 0.47024 82 5 0.701299 68 2 0.54545 22 2 0.5627976 79 7 0.573529 35 2 0.471647 184 5 0.2500000 14 2 0.72778 19 2 0.71875 17 2 0.600000 10 2 0.32985 72 2 0.666667 5 0 0.263393 17 2 0.650000 12 2 0.892857 16 2 1.000000 2 0 0.648371 403 3 0.5748089 135 9 0.6423484 58 5 0.7028044 110 5 0.68750 16 2 0.800000 11 2 0.590909 75 5 0.75000 20 2 0.56250 16 2 0.60156 136 8 0.86345 33 2 1.00000 4 0 0.79167 24 2 0.477685 145 5 0.57406 145 6 0.7297841 121 5 0.315476 47 2 0.600000 20 2 0.3955457 174 8 0.600000 25 0 0.350427 29 2 0.61746 126 5 0.80471 108 6 0.662879 84 5 0.56612 112 5 0.45139 75 8 0.594889 119 5 0.58333 0.701299 0.54545 0.776190 0.573529 0.727931 0.50000000 0.72778 0.93750 0.600000 0.65971 1.0000000 0.5267857 0.800000 0.7857143 1.000000 NA 0.7619048 0.848901 0.753788 0.687500 0.800000 0.750000 0.75000 0.56250 0.74802 0.72689 1.00000 0.79167 0.713853 0.74369 0.7445820 0.630952 0.600000 0.51923077 0.750000 0.525641 0.64583 0.82353 0.666667 0.69083 0.41667 0.724444 0 0.601471 0.639189 -1.3582e-02 5 0.521293 0.604670 -8.3376e-02 0.378196 3.3406e-02 weaklyHypometh 1 1.0000e+00 insignificant 0.797221 0.3035241 insignificant 1 1.00000 insignificant -0.1027961 0.0969842 lowCoverage 1 lowCoverage 0.601471 0.55814 0.0633496 5 0.521293 0.44473 0.0765595 3.6489e-02 4.4623e-01 weaklyHypermeth 4.1942e-01 1.0000e+00 insignificant 1.4941e-01 8.9657e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.11981140 0.11920477 lowCoverage 1.00000 lowCoverage 0.601471 0.61866 -0.0206969 5 0.521293 0.52317 -0.0018750 6.9203e-01 2.0761e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.7370551 5.5833e-01 insignificant 1.00000 1.000000 insignificant -0.01636659 8.2437e-01 lowCoverage 1.0000000 lowCoverage 0.64027 0.53207 0.0821883 5 0.620947 0.42728 0.19366646 3.1206e-03 0.94642323 weaklyHypermeth 5.2010e-02 1.000000 weaklyHypermeth 9.1025e-02 0.9995590 insignificant 1.0000e+00 1.00000 insignificant 0.22260748 0.01036123 lowCoverage 0.515575 lowCoverage 0.64075 0.62249 -0.0055517 5 0.650105 0.59653 0.0535778 4.5880e-01 4.0608e-01 insignificant 1.00000000 1.00000000 insignificant 0.49082248 6.6494e-01 insignificant 1.000000 1.000000 insignificant 0.08642948 0.2644296 lowCoverage 1.00000 lowCoverage 0.53207 0.62173 -0.0921517 5 0.42728 0.56290 -0.1356238 0.89418 3.9441e-03 weaklyHypometh 1 8.7646e-02 weaklyHypometh 0.977016 1.8404e-01 insignificant 1 1.0000000 insignificant -0.1361780 0.1306136 lowCoverage 1.00000 lowCoverage chrX 118745296 118746296 58792 SEPT6 ENSG00000125354 0.71210 181 12 0.731838 119 6 0.60913 85 6 0.5915459 163 13 0.759141 88 6 0.663051 188 10 0.5575933 102 6 0.68062 108 8 0.83333 71 6 0.646667 38 5 0.63951 156 6 0.728175 39 4 0.830303 51 6 0.959596 55 5 0.809524 66 4 0.666667 37 6 0.627551 1281 13 0.6838203 133 15 0.6572222 69 9 0.5700357 117 10 0.90000 24 1 0.825000 33 4 0.719055 158 12 0.68846 63 6 0.87361 83 6 0.66455 237 10 0.79569 45 6 0.66667 11 0 0.68333 63 6 0.645564 159 9 0.67459 182 9 0.6869799 168 9 0.679843 90 8 0.436842 56 6 0.3205369 370 10 0.561540 98 6 0.483225 58 7 0.75374 160 9 0.56331 214 13 0.628424 142 9 0.66888 238 13 0.71326 144 12 0.677863 233 13 0.73809 0.663133 0.65657 0.817979 0.834524 0.747172 0.88780739 0.74986 0.81069 0.822844 0.81594 0.7150350 0.8515929 0.928798 0.8406260 0.778555 0.81037 0.7359141 0.896853 0.701072 0.860140 0.821835 0.870402 0.82541 0.84726 0.81453 0.78792 1.00000 0.85975 0.884366 0.78130 0.7495686 0.772936 0.655441 0.52893015 0.530524 0.757268 0.79373 0.73781 0.947414 0.83704 0.78645 0.809103 4 0.731467 0.742041 -4.0162e-03 9 0.622620 0.707202 -8.4582e-02 0.677530 1.9039e-01 insignificant 1 1.0000e+00 insignificant 0.838170 0.4288230 insignificant 1 1.00000 insignificant -0.0374211 0.2835418 insignificant 1 insignificant 0.731467 0.54152 0.1622419 9 0.622620 0.40864 0.2139824 3.4844e-09 1.0000e+00 weaklyHypermeth 2.0497e-07 1.0000e+00 weaklyHypermeth 5.3428e-03 9.9997e-01 weaklyHypermeth 1.4440e-01 1.0000000 insignificant 0.15858255 0.05968120 insignificant 1.00000 insignificant 0.733032 0.73841 0.0114542 9 0.650058 0.65139 -0.0013303 5.8251e-01 3.2913e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.4150626 6.3977e-01 insignificant 1.00000 1.000000 insignificant 0.04752277 1.9080e-01 insignificant 1.0000000 insignificant 0.74225 0.54087 0.1703871 9 0.718914 0.39229 0.32662184 1.0009e-04 0.99998307 weaklyHypermeth 2.6340e-03 1.000000 weaklyHypermeth 3.8797e-03 0.9999976 weaklyHypermeth 9.9479e-02 1.00000 weaklyHypermeth 0.19600365 0.02839040 weaklyHypermeth 0.887200 insignificant 0.74013 0.73841 0.0094693 9 0.665374 0.65139 0.0139857 5.8198e-01 7.1975e-01 insignificant 1.00000000 1.00000000 insignificant 0.70971187 8.6040e-01 insignificant 1.000000 1.000000 insignificant 0.08494387 0.0375720 weaklyHypermeth 1.00000 insignificant 0.54258 0.73841 -0.2073136 10 0.41940 0.65139 -0.2319927 0.93535 1.4499e-03 weaklyHypometh 1 4.3937e-02 weaklyHypometh 0.992666 2.7415e-02 weaklyHypometh 1 0.6178898 insignificant -0.1110598 0.1606315 insignificant 1.00000 insignificant chrX 118752896 118753896 58793 SEPT6 ENSG00000125354 0.85496 170 5 0.873333 34 2 0.40333 19 1 0.7458797 114 5 0.330357 15 2 0.934900 81 5 0.8190476 22 3 0.86883 70 5 0.91429 35 5 0.904762 25 3 0.84571 173 5 NA 0 0 0.878571 50 3 0.816667 24 2 1.000000 10 0 NA 0 0 NA 0 0 0.7978734 137 5 0.8817508 287 5 0.8516162 191 5 1.00000 5 0 0.666667 6 0 1.000000 28 3 0.66970 36 3 0.91000 24 4 0.85417 114 5 0.77073 76 5 1.00000 5 0 0.86582 174 5 0.940000 75 5 0.80148 143 5 0.6844804 157 5 0.074713 98 5 0.345864 177 5 0.3302031 223 5 0.608696 46 1 0.057193 64 5 0.40818 275 5 0.70794 119 5 0.742127 150 5 0.79077 190 5 0.79086 155 5 0.582211 98 5 0.89036 0.962500 0.42708 0.793481 0.786825 0.861432 0.72023810 0.94643 0.96429 0.857143 0.85936 NA 0.8839286 0.906250 1.0000000 NA NA 0.7999845 0.895862 0.887422 1.000000 0.354229 1.000000 0.89583 0.81875 0.87240 0.83240 1.00000 0.89570 0.937500 0.89213 0.8080719 0.046695 0.472922 0.54703630 0.475521 0.029167 0.36892 0.85060 0.729306 0.80882 0.86866 0.603746 0 0.840769 0.836299 -7.5816e-05 5 0.865275 0.701193 1.6408e-01 0.898649 7.3858e-01 insignificant 1 1.0000e+00 insignificant 0.987458 0.1088316 insignificant 1 1.00000 insignificant -0.0397515 0.4875698 lowCoverage 1 lowCoverage 0.840659 0.35221 0.4855863 5 0.838330 0.34316 0.4951752 5.7205e-23 1.0000e+00 hypermethylated 5.7205e-20 1.0000e+00 hypermethylated 4.0941e-10 1.0000e+00 hypermethylated 3.2720e-07 1.0000000 hypermethylated 0.50302810 0.00088417 lowCoverage 0.06843 lowCoverage 0.840659 0.74471 0.1037420 5 0.838330 0.73831 0.1000175 7.2537e-04 9.8461e-01 weaklyHypermeth 0.0725373 1.0000e+00 weaklyHypermeth 0.0015060 9.8663e-01 weaklyHypermeth 0.30119 1.000000 insignificant 0.08438797 1.6305e-01 lowCoverage 1.0000000 lowCoverage 0.83729 0.35221 0.4947760 5 0.841432 0.34316 0.49827680 1.5765e-16 1.00000000 hypermethylated 5.2550e-14 1.000000 hypermethylated 8.7865e-10 1.0000000 hypermethylated 8.7865e-07 1.00000 hypermethylated 0.54277962 0.00066928 lowCoverage 0.060843 lowCoverage 0.83729 0.74471 0.1117847 5 0.841432 0.73831 0.1031190 1.2115e-02 9.9709e-01 weaklyHypermeth 0.60575830 1.00000000 insignificant 0.00018107 1.0000e+00 weaklyHypermeth 0.036215 1.000000 weaklyHypermeth 0.12413949 0.0397330 lowCoverage 1.00000 lowCoverage 0.35221 0.74471 -0.3685933 5 0.34316 0.73831 -0.3951578 1.00000 2.5510e-08 hypomethylated 1 6.5600e-06 hypomethylated 1.000000 4.2367e-06 hypomethylated 1 0.0021184 hypomethylated -0.4186401 0.0030599 lowCoverage 0.53210 lowCoverage chrX 118789596 118790596 58796 ANKRD58 ENSG00000187808 0.68170 142 8 0.592607 51 5 0.70370 29 3 0.7927625 119 5 0.583333 15 1 0.571390 238 10 0.8000000 22 2 0.64683 47 3 0.83333 16 1 0.800000 19 1 0.81954 86 5 0.800000 7 1 0.708333 23 1 0.775926 18 2 0.708333 14 1 0.916667 9 0 0.787215 332 5 0.5868113 125 9 0.7403509 36 4 0.8353806 161 7 0.63399 40 3 0.597403 50 6 0.692500 61 6 0.51108 46 3 0.65354 69 3 0.68842 182 7 0.52480 79 3 0.36667 17 2 0.81250 46 3 0.540016 137 7 0.59963 167 7 0.6247918 186 7 0.612573 59 6 0.465774 33 1 0.8014687 135 6 0.533333 12 0 0.696581 18 1 0.68171 175 7 0.54504 94 5 0.721672 122 8 0.66748 129 8 0.73333 46 5 0.572439 108 5 0.91400 0.646178 0.83025 0.963291 0.902778 0.895931 0.86111111 0.78770 0.78222 0.916667 0.90259 0.5738899 0.8680556 0.773736 0.8263889 0.930556 0.78327 0.8529040 0.873684 0.798317 0.646082 0.651876 0.884722 0.75615 0.84448 0.83946 0.82313 0.81019 0.89931 0.856214 0.87271 0.8741253 0.737573 0.557540 0.84399442 0.710111 0.817719 0.86892 0.80082 0.867243 0.88915 0.86188 0.706349 0 0.724321 0.682113 4.2149e-02 6 0.629076 0.571149 5.7927e-02 0.010786 9.8332e-01 weaklyHypermeth 1 1.0000e+00 insignificant 0.032792 0.9991114 weaklyHypermeth 1 1.00000 insignificant 0.1304330 0.0031418 lowCoverage 1 lowCoverage 0.724801 0.66204 0.0601695 5 0.681499 0.66674 0.0147604 3.4487e-02 9.1028e-01 weaklyHypermeth 4.0102e-01 1.0000e+00 insignificant 6.7755e-02 9.9193e-01 insignificant 9.8084e-01 1.0000000 insignificant 0.10230396 0.09967321 lowCoverage 1.00000 lowCoverage 0.723955 0.70741 -0.0049028 5 0.598165 0.57957 0.0185994 5.8160e-02 1.4501e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.4490122 6.1315e-01 insignificant 1.00000 1.000000 insignificant 0.08621837 9.2747e-02 lowCoverage 1.0000000 lowCoverage 0.68275 0.66204 0.0162129 6 0.618745 0.66674 -0.04799371 4.0222e-01 0.65460603 insignificant 1.0000e+00 1.000000 insignificant 6.3681e-01 0.8379269 insignificant 1.0000e+00 1.00000 insignificant -0.02812903 0.64432908 lowCoverage 1.000000 lowCoverage 0.68245 0.70741 -0.0697264 5 0.577078 0.57957 -0.0024881 9.4871e-01 4.6715e-02 weaklyHypometh 1.00000000 1.00000000 insignificant 0.95886992 1.0846e-01 insignificant 1.000000 1.000000 insignificant -0.04421463 0.3986761 lowCoverage 1.00000 lowCoverage 0.66047 0.70825 -0.1173196 4 0.63644 0.58680 0.0496425 0.74364 1.4586e-02 lowCoverage 1 2.3526e-01 lowCoverage 0.961698 1.1131e-01 lowCoverage 1 1.0000000 lowCoverage -0.0160856 0.8028010 lowCoverage 1.00000 lowCoverage chrX 118910596 118911596 58801 RNF113A ENSG00000125352 0.83518 239 6 0.814119 143 6 0.84700 163 4 0.9363777 80 4 0.876020 42 4 0.948049 86 4 0.8535236 118 6 0.81760 132 6 0.87909 103 6 0.915545 128 6 0.93360 162 4 0.939815 28 3 0.901840 116 6 1.000000 1 0 0.976984 68 6 1.000000 18 3 0.919841 66 6 0.9646739 89 6 0.9162698 121 4 0.7314370 175 4 0.81250 10 0 0.567130 35 4 0.937601 106 4 0.72520 43 5 1.00000 38 2 0.90514 260 6 0.88651 44 4 0.82000 17 1 0.91570 148 4 0.857633 149 6 0.90739 234 6 0.8933181 292 6 0.705746 73 6 0.677515 132 6 0.3379433 59 3 0.702083 32 2 0.960000 19 2 0.84529 272 6 0.91911 278 6 0.972473 148 4 0.92514 235 6 0.93298 273 6 0.981548 126 4 0.90215 0.822048 0.78635 0.931569 0.900510 0.920617 0.81350969 0.82195 0.90967 0.917496 0.93262 0.9431217 0.8945063 NA 0.9671202 0.961805 0.97876 0.9513170 0.869678 0.833715 0.965380 0.673942 0.854078 0.92356 0.97273 0.92200 0.86449 0.87501 0.93100 0.936346 0.89098 0.8893367 0.654879 0.653619 0.44497501 0.714875 0.930381 0.70116 0.91138 0.961347 0.89774 0.95229 0.982748 1 0.866218 0.867733 1.3344e-03 6 0.899916 0.899981 -6.4599e-05 0.853934 7.8122e-01 insignificant 1 1.0000e+00 insignificant 0.379121 0.9495938 insignificant 1 1.00000 insignificant 0.0480049 0.2038066 lowCoverage 1 lowCoverage 0.866218 0.66440 0.1858425 5 0.899916 0.75429 0.1456270 9.2438e-10 1.0000e+00 weaklyHypermeth 6.6027e-08 1.0000e+00 weaklyHypermeth 1.3041e-04 1.0000e+00 weaklyHypermeth 9.3153e-03 1.0000000 weaklyHypermeth 0.19558580 0.07129938 lowCoverage 1.00000 lowCoverage 0.866153 0.91226 -0.0484456 6 0.883235 0.93360 -0.0503638 9.9916e-01 4.9762e-03 weaklyHypometh 1.0000000 2.4881e-01 insignificant 0.9961930 3.3389e-02 weaklyHypometh 1.00000 1.000000 insignificant -0.04590239 3.5417e-02 lowCoverage 1.0000000 lowCoverage 0.86773 0.66440 0.1967554 5 0.899981 0.75429 0.14569155 2.0495e-06 0.99999040 weaklyHypermeth 9.7595e-05 1.000000 weaklyHypermeth 5.4908e-03 0.9998595 weaklyHypermeth 1.3727e-01 1.00000 insignificant 0.14758090 0.15491970 lowCoverage 1.000000 lowCoverage 0.86754 0.91226 -0.0498388 6 0.883311 0.93360 -0.0502885 9.9812e-01 2.9853e-02 weaklyHypometh 1.00000000 1.00000000 insignificant 0.99689370 1.2610e-02 weaklyHypometh 1.000000 1.000000 insignificant -0.09390729 0.0186424 lowCoverage 1.00000 lowCoverage 0.66382 0.91226 -0.2579530 5 0.71334 0.93360 -0.2202620 1.00000 7.4482e-07 hypomethylated 1 9.3102e-05 hypomethylated 1.000000 2.1059e-04 hypomethylated 1 0.0233992 hypomethylated -0.2414882 0.0367556 lowCoverage 0.94590 lowCoverage chrX 119113596 119114596 58804 RHOXF2B ENSG00000203989 0.81830 229 5 0.897619 43 1 0.68264 110 5 0.9585683 94 4 0.902778 49 3 0.919719 110 5 0.8882517 58 5 0.85317 87 5 0.86529 56 3 0.957372 65 3 0.84668 96 5 0.825000 15 1 0.843699 61 3 1.000000 17 1 0.800000 35 2 0.825000 11 1 0.452381 11 1 0.8320993 181 4 0.8357639 71 3 0.7408333 199 4 0.60000 17 1 0.438889 22 1 0.928333 55 5 0.59048 50 5 0.77054 84 5 0.87582 123 5 0.79336 59 5 0.85056 33 3 0.91587 79 4 0.945000 79 5 0.74604 114 5 0.8970737 147 5 0.638172 53 2 0.315546 53 3 0.1785714 80 3 0.349206 11 1 0.611111 38 5 0.65449 163 5 0.86240 265 4 0.915476 87 4 0.91290 243 4 0.58855 112 3 0.924638 90 4 0.82622 0.893318 0.67313 0.941583 0.935484 0.919222 0.86945635 0.82719 0.84223 0.925931 0.82422 0.6532258 0.8338579 0.991289 0.9483871 0.754839 0.64237 0.8856391 0.844422 0.833602 0.790323 0.630076 0.957527 0.92151 0.94686 0.92467 0.74214 0.82419 0.86303 0.943145 0.73089 0.8802000 0.702220 0.406885 0.59907834 0.574400 0.651434 0.58590 0.88052 0.889708 0.91948 0.63930 0.961898 1 0.849812 0.848028 -6.7103e-03 4 0.835114 0.653064 1.8205e-01 0.477499 5.8707e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.273752 0.9748264 lowCoverage 1 1.00000 lowCoverage 0.0579285 0.2889785 lowCoverage 1 lowCoverage 0.850157 0.59548 0.2543361 4 0.863188 0.45462 0.4085664 1.2447e-11 9.9999e-01 lowCoverage 1.1316e-09 1.0000e+00 lowCoverage 9.7885e-07 1.0000e+00 lowCoverage 1.6314e-04 1.0000000 lowCoverage 0.37940857 0.00461666 lowCoverage 0.28854 lowCoverage 0.850063 0.88582 -0.0349658 4 0.835826 0.86435 -0.0285248 9.3361e-01 1.8835e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage 0.5180862 5.8760e-01 lowCoverage 1.00000 1.000000 lowCoverage -0.00353333 9.6105e-01 lowCoverage 1.0000000 lowCoverage 0.85099 0.59548 0.2639624 5 0.761908 0.45462 0.30728669 2.2270e-08 0.99958635 hypermethylated 1.8068e-06 1.000000 hypermethylated 2.2362e-05 0.9999990 hypermethylated 2.2362e-03 1.00000 hypermethylated 0.32148011 0.00898973 lowCoverage 0.515575 lowCoverage 0.85280 0.88582 -0.0299801 4 0.847623 0.86435 -0.0167271 7.7631e-01 2.6722e-01 lowCoverage 1.00000000 1.00000000 lowCoverage 0.79330748 3.9325e-01 lowCoverage 1.000000 1.000000 lowCoverage -0.06146179 0.4574419 lowCoverage 1.00000 lowCoverage 0.59698 0.88582 -0.2831129 4 0.54555 0.86435 -0.3188044 0.99976 2.5170e-05 lowCoverage 1 1.6780e-03 lowCoverage 0.999978 9.0865e-04 lowCoverage 1 0.0826049 lowCoverage -0.3829419 0.0053709 lowCoverage 0.58002 lowCoverage chrX 122792196 122793196 58842 ENSG00000213737 0.53084 258 7 0.424995 222 7 0.43029 145 7 0.6364232 133 7 0.535742 86 7 0.693690 353 7 0.5799537 147 7 0.57944 137 7 0.60059 145 7 0.609638 144 8 0.59554 232 7 0.606885 97 7 0.605902 139 7 0.805556 24 1 0.713299 121 7 0.532292 66 6 0.590320 357 7 0.6223337 153 7 0.6824774 151 7 0.6997030 263 7 0.59747 43 4 0.632647 82 7 0.657930 142 7 0.73525 101 5 0.64613 85 7 0.65255 241 7 0.55158 89 6 0.56320 86 7 0.56466 147 7 0.588596 246 7 0.54733 246 7 0.6233054 387 7 0.579802 177 7 0.556384 101 7 0.6096994 203 6 0.674837 51 4 0.585698 115 6 0.46005 201 7 0.55025 199 7 0.470805 194 7 0.71987 208 7 0.65314 207 7 0.586368 200 7 0.66590 0.598996 0.55769 0.700297 0.680934 0.675534 0.64449192 0.63781 0.65172 0.681141 0.65868 0.6726270 0.6181184 0.678657 0.7680329 0.662133 0.63345 0.6678151 0.683894 0.674801 0.738133 0.689550 0.712316 0.73953 0.70670 0.70268 0.61231 0.72488 0.62570 0.677045 0.67221 0.6828526 0.629865 0.597270 0.59252307 0.753500 0.596321 0.64600 0.63280 0.670287 0.70562 0.71707 0.657772 7 0.641269 0.678628 -2.4605e-02 7 0.593615 0.577464 1.6152e-02 0.929819 2.1643e-02 weaklyHypometh 1 1.0000e+00 insignificant 0.932916 0.0358218 weaklyHypometh 1 1.00000 insignificant -0.0095923 0.7130455 insignificant 1 insignificant 0.641269 0.59080 0.0418536 7 0.593615 0.57771 0.0159017 1.7242e-02 7.7970e-01 weaklyHypermeth 2.2392e-01 1.0000e+00 insignificant 1.2613e-01 6.9267e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.02605080 0.47535383 insignificant 1.00000 insignificant 0.641269 0.63095 -0.0201452 7 0.593615 0.58370 0.0099108 8.5525e-01 2.1903e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.8044279 2.4986e-01 insignificant 1.00000 1.000000 insignificant 0.00770851 8.7586e-01 insignificant 1.0000000 insignificant 0.67863 0.59080 0.0691509 7 0.577464 0.57771 -0.00024984 1.5229e-05 0.87624225 weaklyHypermeth 5.0765e-04 1.000000 weaklyHypermeth 1.0537e-02 0.8837056 weaklyHypermeth 2.2420e-01 1.00000 insignificant 0.03564307 0.30971689 insignificant 1.000000 insignificant 0.67863 0.63095 0.0030531 7 0.577464 0.58370 -0.0062408 1.8539e-01 3.6195e-01 insignificant 1.00000000 1.00000000 insignificant 0.24230826 5.5491e-01 insignificant 1.000000 1.000000 insignificant 0.01730078 0.7195163 insignificant 1.00000 insignificant 0.59080 0.63095 -0.0634878 7 0.57771 0.58370 -0.0059910 0.81398 2.3170e-03 weaklyHypometh 1 5.7924e-02 weaklyHypometh 0.782355 1.9170e-01 insignificant 1 1.0000000 insignificant -0.0183423 0.7317829 insignificant 1.00000 insignificant chrX 122841196 122842196 58846 ENSG00000218469 0.61611 110 7 0.673975 88 6 0.69156 67 7 0.6437500 43 5 0.490306 69 6 0.607095 82 7 0.5868056 80 5 0.61734 78 7 0.71164 57 8 0.575758 55 4 0.69334 157 7 0.718750 32 4 0.672827 77 7 0.782222 56 7 0.680506 92 7 0.640816 45 7 0.541537 388 4 0.7691833 83 7 0.4799011 90 7 0.6756899 98 7 0.26667 22 4 0.718750 29 4 0.578125 39 4 0.75926 23 2 0.71310 73 7 0.51516 164 7 0.75092 34 3 0.52083 13 0 0.46532 77 7 0.690625 92 7 0.56932 81 6 0.6250000 27 3 0.580161 90 7 0.545442 52 6 0.5708333 93 6 0.670000 30 4 0.577381 61 7 0.53651 89 6 0.70387 144 7 0.568275 57 6 0.70062 96 6 0.69415 57 5 0.764502 81 7 0.51704 0.583639 0.64073 0.554310 0.465620 0.604185 0.53448276 0.48831 0.62562 0.569619 0.59380 0.6840553 0.6774234 0.605364 0.6349518 0.574507 0.56023 0.6383915 0.366771 0.601651 0.337931 0.681775 0.427802 0.83477 0.61535 0.52918 0.64982 0.52586 0.58542 0.603879 0.57006 0.6271552 0.487216 0.628360 0.50107759 0.618416 0.555419 0.50755 0.69864 0.539084 0.68695 0.67549 0.727142 0 0.626421 0.624441 5.4411e-03 7 0.748088 0.646926 1.0116e-01 0.649069 9.5837e-01 insignificant 1 1.0000e+00 insignificant 0.711569 0.9246822 insignificant 1 1.00000 insignificant 0.0457003 0.3293369 lowCoverage 1 lowCoverage 0.626016 0.56627 0.0412355 7 0.722897 0.57708 0.1458152 2.1843e-01 9.9451e-01 insignificant 1.0000e+00 1.0000e+00 insignificant 1.9887e-01 9.8661e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.06340193 0.03099916 weaklyHypermeth 1.00000 insignificant 0.625000 0.71264 -0.0712706 7 0.653621 0.72335 -0.0697299 9.9545e-01 2.3618e-03 weaklyHypometh 1.0000000 1.4086e-01 insignificant 0.9908898 1.3878e-02 weaklyHypometh 1.00000 0.854712 insignificant -0.04282732 2.8473e-01 insignificant 1.0000000 insignificant 0.62388 0.56627 0.0324835 7 0.611619 0.57708 0.03453725 6.4448e-01 0.96834083 insignificant 1.0000e+00 1.000000 insignificant 6.1818e-01 0.9101940 insignificant 1.0000e+00 1.00000 insignificant 0.01770159 0.70497882 lowCoverage 1.000000 lowCoverage 0.62369 0.71264 -0.0707668 7 0.639524 0.72335 -0.0838274 9.5285e-01 2.1336e-02 weaklyHypometh 1.00000000 1.00000000 insignificant 0.97730193 1.6256e-01 insignificant 1.000000 1.000000 insignificant -0.08852766 0.1137353 lowCoverage 1.00000 lowCoverage 0.56659 0.71264 -0.1044021 7 0.59635 0.72335 -0.1269990 0.99069 2.0065e-03 weaklyHypometh 1 5.1448e-02 weaklyHypometh 0.989901 2.2531e-02 weaklyHypometh 1 0.5495419 insignificant -0.1062292 0.0263939 weaklyHypometh 0.87017 insignificant chrX 122872196 122873196 58849 ENSG00000208735 0.82193 180 6 0.736321 78 6 0.80774 79 6 0.7381292 121 6 0.779167 33 4 0.867322 167 6 0.8388422 108 6 0.67778 44 3 0.69643 67 6 0.633781 67 6 0.79467 163 6 0.703030 64 6 0.726106 71 5 NA 0 0 0.739160 86 6 0.763757 45 6 0.865320 61 6 0.8266595 105 6 0.8611111 38 2 0.8645682 136 6 0.85714 42 6 0.893162 50 5 0.814730 134 6 0.96667 15 2 0.85582 44 6 0.75893 93 5 0.81905 28 2 0.89143 16 2 0.88690 29 2 0.755590 107 6 0.80368 86 6 0.8207392 232 6 0.794697 42 4 0.749359 93 6 0.7639042 85 6 0.853030 62 6 0.639583 39 2 0.63596 98 6 0.83314 162 6 0.859085 251 6 0.80072 172 6 0.80716 265 6 0.817601 160 6 0.81326 0.737175 0.83622 0.744918 0.830182 0.847976 0.81115976 0.69804 0.66897 0.634494 0.75714 0.7100076 0.7402391 NA 0.7468433 0.713445 0.85799 0.8263942 0.827731 0.812610 0.885954 0.882030 0.784937 0.94790 0.80132 0.76045 0.74206 0.84434 0.85684 0.788025 0.77418 0.8303183 0.820283 0.725307 0.76839414 0.792131 0.656723 0.66474 0.81473 0.851447 0.78002 0.78359 0.792471 2 0.794513 0.810502 -2.2982e-02 6 0.788505 0.812456 -2.3951e-02 0.926117 1.4540e-01 insignificant 1 1.0000e+00 insignificant 0.999785 0.0029705 weaklyHypometh 1 0.99015 insignificant -0.0677685 0.0086608 lowCoverage 1 lowCoverage 0.794513 0.74702 0.0380493 6 0.788505 0.74950 0.0390069 6.0846e-02 9.6264e-01 insignificant 6.6864e-01 1.0000e+00 insignificant 3.1828e-01 9.4449e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.03646365 0.37788301 insignificant 1.00000 insignificant 0.794513 0.84356 -0.0345590 6 0.788505 0.82313 -0.0346230 9.7890e-01 1.2374e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.9615598 1.6405e-01 insignificant 1.00000 1.000000 insignificant -0.04765535 2.2440e-02 weaklyHypometh 0.8535964 insignificant 0.81050 0.74702 0.0607315 6 0.812456 0.74950 0.06295780 2.0905e-02 0.99601712 weaklyHypermeth 2.7507e-01 1.000000 insignificant 6.7042e-03 0.9997815 weaklyHypermeth 1.6352e-01 1.00000 insignificant 0.10423212 0.03091159 lowCoverage 0.896120 lowCoverage 0.81050 0.84356 -0.0069518 6 0.812456 0.82313 -0.0106721 6.6548e-01 3.6432e-01 insignificant 1.00000000 1.00000000 insignificant 0.16707046 9.3382e-01 insignificant 1.000000 1.000000 insignificant 0.02011311 0.3398888 lowCoverage 1.00000 lowCoverage 0.74702 0.84356 -0.0662270 6 0.74950 0.82313 -0.0736299 0.97819 2.7648e-02 weaklyHypometh 1 3.9497e-01 insignificant 0.971642 8.2939e-02 insignificant 1 1.0000000 insignificant -0.0841190 0.0632900 insignificant 1.00000 insignificant chrX 122896896 122897896 58852 ENSG00000208735 0.49769 253 6 0.457171 148 6 0.43077 97 6 0.5802401 149 6 0.551276 54 6 0.657538 272 6 0.3537037 97 6 0.65130 144 6 0.48620 101 6 0.599389 91 6 0.67263 253 6 0.569444 67 6 0.610272 96 6 0.825758 38 3 0.607221 104 6 0.679293 34 3 0.609524 67 3 0.6300417 149 6 0.6046719 95 4 0.5413210 275 6 0.54545 31 2 0.651204 80 6 0.582721 114 3 0.59153 82 6 0.50707 81 6 0.67802 187 6 0.57004 88 6 0.67083 39 2 0.37834 108 6 0.690048 168 6 0.58183 168 6 0.6705987 334 6 0.524338 121 6 0.503440 93 6 0.3731139 143 6 0.717865 39 3 0.566360 73 6 0.35650 171 6 0.68626 224 6 0.731726 175 6 0.67461 181 6 0.56320 168 6 0.596092 184 6 0.66195 0.597376 0.50836 0.717329 0.661864 0.669525 0.61680901 0.67077 0.64791 0.677371 0.69081 0.6707428 0.6626119 0.743767 0.7675983 0.769681 0.65807 0.6956338 0.684088 0.705014 0.705534 0.674750 0.711765 0.70308 0.63547 0.70118 0.62049 0.76467 0.55592 0.746866 0.72886 0.6596950 0.529311 0.492733 0.41684706 0.627415 0.645609 0.53835 0.72962 0.722495 0.74678 0.72120 0.712110 3 0.649768 0.687162 -2.1221e-02 6 0.570255 0.600359 -3.0103e-02 0.911070 1.1958e-01 insignificant 1 1.0000e+00 insignificant 0.958202 0.1966083 insignificant 1 1.00000 insignificant -0.0123689 0.7243872 insignificant 1 insignificant 0.649768 0.55000 0.1194224 6 0.570255 0.41303 0.1572244 3.8636e-05 9.9716e-01 weaklyHypermeth 1.2879e-03 1.0000e+00 weaklyHypermeth 4.6809e-03 9.9305e-01 weaklyHypermeth 1.3003e-01 1.0000000 insignificant 0.07383632 0.25240496 insignificant 1.00000 insignificant 0.649768 0.68777 -0.0498889 6 0.570255 0.65986 -0.0896031 9.9859e-01 5.3332e-02 insignificant 1.0000000 1.0000e+00 insignificant 0.9996418 7.9620e-02 insignificant 1.00000 1.000000 insignificant -0.06960609 1.0386e-01 insignificant 1.0000000 insignificant 0.68716 0.55000 0.1412290 6 0.600359 0.41303 0.18732752 7.4789e-06 0.99967996 weaklyHypermeth 2.9915e-04 1.000000 weaklyHypermeth 2.1629e-03 0.9988663 weaklyHypermeth 6.7189e-02 1.00000 weaklyHypermeth 0.08620525 0.19379586 insignificant 1.000000 insignificant 0.68716 0.68777 -0.0313406 6 0.600359 0.65986 -0.0594999 9.2182e-01 1.1171e-01 insignificant 1.00000000 1.00000000 insignificant 0.98686002 2.3435e-01 insignificant 1.000000 1.000000 insignificant -0.05723716 0.1862810 insignificant 1.00000 insignificant 0.55000 0.68777 -0.1704401 6 0.41303 0.65986 -0.2468274 0.99999 4.4447e-04 weaklyHypometh 1 1.7886e-02 weaklyHypometh 1.000000 3.6571e-03 weaklyHypometh 1 0.1667428 insignificant -0.1434424 0.0521495 insignificant 1.00000 insignificant chrX 122913996 122914996 58854 ENSG00000208735 0.71895 374 13 0.647213 325 13 0.61575 216 13 0.8112017 303 13 0.661491 169 13 0.645790 380 13 0.5468203 214 10 0.63486 283 13 0.68713 198 13 0.748369 191 13 0.62362 446 13 0.626761 114 7 0.772575 307 13 0.746818 92 10 0.757335 159 13 0.690547 75 5 0.469063 345 8 0.6994268 332 15 0.7920376 227 13 0.5857958 346 13 0.63744 101 11 0.785812 97 10 0.725867 203 11 0.70045 129 10 0.58132 86 10 0.74971 339 13 0.65676 145 10 0.67188 79 7 0.72822 250 11 0.639778 306 13 0.55509 329 13 0.6060518 463 16 0.646284 239 13 0.563409 194 13 0.5912038 283 13 0.754549 91 7 0.635125 149 12 0.69109 369 13 0.74415 325 13 0.751227 365 13 0.71502 356 13 0.75690 277 13 0.769437 326 13 0.75210 0.736972 0.61443 0.798876 0.699284 0.704833 0.64350982 0.66568 0.70466 0.768382 0.72303 0.6611932 0.8488619 0.738764 0.7327428 0.704494 0.57971 0.7571393 0.776511 0.751915 0.745045 0.727092 0.736249 0.82743 0.61861 0.76604 0.72339 0.69471 0.72512 0.721105 0.71252 0.7450548 0.650178 0.631954 0.67083072 0.763363 0.752643 0.63037 0.78054 0.773684 0.75174 0.78370 0.765004 6 0.735871 0.757420 -1.0524e-02 13 0.598757 0.603405 -4.6482e-03 0.720506 5.3892e-01 insignificant 1 1.0000e+00 insignificant 0.916604 0.3535222 insignificant 1 1.00000 insignificant 0.0042134 0.8814461 insignificant 1 insignificant 0.735871 0.66943 0.0648202 13 0.598757 0.58745 0.0113057 1.0939e-03 9.9629e-01 weaklyHypermeth 2.2324e-02 1.0000e+00 weaklyHypermeth 2.1399e-01 8.9562e-01 insignificant 1.0000e+00 1.0000000 insignificant 0.02713379 0.44419595 insignificant 1.00000 insignificant 0.739027 0.77744 -0.0411369 13 0.723368 0.71550 0.0078719 9.6625e-01 1.9341e-02 weaklyHypometh 1.0000000 6.9077e-01 insignificant 0.9637427 1.2042e-02 weaklyHypometh 1.00000 0.802790 insignificant -0.07327121 2.2119e-03 weaklyHypometh 0.2457614 insignificant 0.75742 0.66943 0.0745095 13 0.603405 0.58745 0.01595388 2.9133e-04 0.99423026 weaklyHypermeth 6.3333e-03 1.000000 weaklyHypermeth 1.3234e-01 0.9820029 insignificant 1.0000e+00 1.00000 insignificant 0.02292038 0.52352220 insignificant 1.000000 insignificant 0.76471 0.77744 -0.0297081 13 0.699661 0.71550 -0.0158351 9.9437e-01 2.3951e-02 weaklyHypometh 1.00000000 1.00000000 insignificant 0.92556468 5.2374e-02 insignificant 1.000000 1.000000 insignificant -0.07748462 0.0035795 weaklyHypometh 0.51272 insignificant 0.67302 0.77744 -0.1079845 13 0.68770 0.71550 -0.0278002 0.99556 8.1373e-08 weaklyHypometh 1 1.6275e-05 weaklyHypometh 0.950114 3.6683e-03 weaklyHypometh 1 0.1667428 insignificant -0.1004050 0.0145182 weaklyHypometh 0.67493 insignificant chrX 122934796 122935796 58857 STAG2 ENSG00000101972 0.74747 223 7 0.627457 125 7 0.65855 99 7 0.7247591 122 7 0.684679 78 6 0.686402 330 7 0.7895591 150 7 0.72980 150 7 0.70173 122 7 0.780433 127 7 0.77945 337 7 0.614935 54 7 0.718529 150 7 0.925926 39 3 0.730635 131 7 0.733045 81 7 0.603105 69 5 0.7255116 160 6 0.7858430 237 7 0.6575948 327 7 0.74301 49 5 0.841307 73 6 0.762853 146 6 0.76220 101 5 0.66667 49 6 0.74904 228 7 0.66548 96 4 0.77507 93 6 0.67513 195 7 0.759178 202 7 0.76280 243 7 0.7355373 388 7 0.619195 117 7 0.683193 134 7 0.6548106 200 8 0.815193 60 5 0.740478 104 7 0.64594 223 7 0.75404 303 7 0.791130 156 7 0.68570 181 7 0.75470 211 7 0.737181 167 7 0.80015 0.738040 0.74369 0.825801 0.702312 0.796958 0.84417720 0.78022 0.73818 0.796307 0.80831 0.7016414 0.7833947 0.791314 0.7691876 0.781746 0.73776 0.7457275 0.833369 0.742274 0.766742 0.852459 0.756554 0.79246 0.74868 0.79242 0.80190 0.80923 0.70264 0.810595 0.80603 0.7880273 0.660704 0.670035 0.78324194 0.814327 0.728361 0.71025 0.85301 0.814646 0.78558 0.79884 0.796628 4 0.784635 0.795491 -4.0210e-03 7 0.682422 0.742842 -6.0420e-02 0.705001 2.7893e-01 insignificant 1 1.0000e+00 insignificant 0.562842 0.2215305 insignificant 1 1.00000 insignificant -0.0212516 0.3446246 insignificant 1 insignificant 0.783941 0.71957 0.0501334 7 0.642725 0.62431 0.0184106 3.4959e-03 9.5372e-01 weaklyHypermeth 6.0273e-02 1.0000e+00 weaklyHypermeth 2.9323e-02 6.7679e-01 weaklyHypermeth 5.6222e-01 1.0000000 insignificant 0.02713485 0.44624963 insignificant 1.00000 insignificant 0.784635 0.80747 -0.0234221 7 0.682422 0.70555 -0.0231262 9.9623e-01 2.8381e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.9992881 2.5482e-01 insignificant 1.00000 1.000000 insignificant -0.02427918 3.2698e-01 insignificant 1.0000000 insignificant 0.79505 0.71957 0.0578545 7 0.710697 0.62431 0.08638308 1.1706e-04 0.94960617 weaklyHypermeth 2.7222e-03 1.000000 weaklyHypermeth 1.1994e-02 0.7750528 weaklyHypermeth 2.4955e-01 1.00000 insignificant 0.04838647 0.18430079 insignificant 1.000000 insignificant 0.79549 0.80747 -0.0166603 7 0.742842 0.70555 0.0372938 9.4886e-01 2.8700e-01 insignificant 1.00000000 1.00000000 insignificant 0.98027495 1.6925e-01 insignificant 1.000000 1.000000 insignificant -0.00302756 0.8960767 insignificant 1.00000 insignificant 0.71957 0.80709 -0.0765650 7 0.62431 0.66874 -0.0444275 0.98573 1.9207e-03 weaklyHypometh 1 5.1448e-02 weaklyHypometh 0.982825 8.3875e-03 weaklyHypometh 1 0.2723666 insignificant -0.0514140 0.1727854 insignificant 1.00000 insignificant chrX 128924196 128925196 58893 UTP14A ENSG00000156697 0.64323 156 5 0.268353 122 3 0.37778 150 3 0.6067971 120 5 0.378623 109 4 0.645151 233 5 0.2651786 111 3 0.27222 124 3 0.44141 121 3 0.513130 90 3 0.61378 162 3 0.590000 38 3 0.154762 95 3 0.529101 58 3 0.301471 79 3 0.255952 57 2 0.845378 262 2 0.5087611 89 5 0.1396825 153 2 0.4573773 228 5 0.25656 33 3 0.325395 66 3 0.541014 65 4 0.39120 135 3 0.61596 59 3 0.64563 218 5 0.57341 73 3 0.44387 64 2 0.85972 53 2 0.432804 166 5 0.51607 209 6 0.6065501 245 5 0.430828 82 2 0.249956 60 3 0.2910256 139 3 0.000000 3 0 0.451277 109 3 0.55724 185 5 0.56651 221 5 0.759398 115 4 0.63504 217 5 0.48982 98 5 0.615362 116 4 0.61085 0.335009 0.38006 0.586754 0.261360 0.636197 0.38047138 0.42580 0.36786 0.378052 0.53697 0.3960606 0.1726792 0.558602 0.3978015 0.388889 0.87030 0.4647995 0.140067 0.469614 0.256728 0.250339 0.454016 0.39474 0.55184 0.46585 0.38091 0.67124 0.64851 0.358245 0.40131 0.5225854 0.218129 0.131195 0.12985625 0.047339 0.276922 0.14722 0.50339 0.586760 0.61862 0.45673 0.513295 2 0.489636 0.463925 2.8140e-02 3 0.499885 0.546798 -4.6913e-02 0.821794 2.0530e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.972158 0.1731978 lowCoverage 1 1.00000 lowCoverage -0.0769418 0.2312466 lowCoverage 1 lowCoverage 0.489636 0.24221 0.2586479 3 0.499885 0.41537 0.0845106 6.2690e-03 7.7806e-01 lowCoverage 8.9751e-02 1.0000e+00 lowCoverage 5.0644e-02 5.3787e-01 lowCoverage 8.1684e-01 1.0000000 lowCoverage 0.11035246 0.25794604 lowCoverage 1.00000 lowCoverage 0.489636 0.56975 -0.0425562 3 0.499885 0.65906 -0.1591767 9.8101e-01 5.2701e-03 lowCoverage 1.0000000 2.5096e-01 lowCoverage 0.9990703 1.8845e-03 lowCoverage 1.00000 0.188451 lowCoverage -0.17281929 1.4760e-02 lowCoverage 0.7380208 lowCoverage 0.46392 0.24221 0.2238061 3 0.546798 0.41537 0.13142396 1.0568e-04 0.83607479 lowCoverage 2.6420e-03 1.000000 lowCoverage 5.3618e-02 0.7521116 lowCoverage 8.1239e-01 1.00000 lowCoverage 0.18729428 0.07635401 lowCoverage 1.000000 lowCoverage 0.46392 0.56975 -0.0770734 5 0.546798 0.65906 -0.1122634 9.7587e-01 1.1412e-02 weaklyHypometh 1.00000000 0.84868021 insignificant 0.99343982 1.9240e-02 weaklyHypometh 1.000000 1.000000 insignificant -0.09587747 0.1617181 lowCoverage 1.00000 lowCoverage 0.24221 0.56975 -0.3277102 3 0.41537 0.65906 -0.2436873 0.92590 1.7947e-06 lowCoverage 1 1.9941e-04 lowCoverage 0.975321 2.4361e-02 lowCoverage 1 0.5800273 lowCoverage -0.2831717 0.0158311 lowCoverage 0.68831 lowCoverage chrX 130803696 130804696 58948 ENSG00000220528 0.73781 106 5 0.646813 109 5 0.57619 49 5 0.8574293 88 5 0.800606 44 5 0.765983 169 5 0.7592593 38 5 0.83218 104 5 0.56325 63 5 0.833333 51 5 0.79709 176 5 0.850000 16 0 0.791667 76 5 0.745455 47 5 0.782143 42 2 0.733333 15 0 0.883333 12 0 0.6143107 121 5 0.7310517 97 5 0.6198593 147 5 0.79048 27 2 0.598214 46 4 0.763897 103 5 0.51214 42 4 0.61333 19 3 0.70411 163 5 0.65048 57 2 0.96429 13 0 0.80641 103 5 0.744785 152 5 0.72039 139 5 0.8305385 153 5 0.781869 100 5 0.681964 58 5 0.6574309 124 5 0.483333 14 0 0.615152 62 5 0.69419 166 5 0.75370 83 5 0.722003 81 5 0.62734 108 5 0.50945 83 5 0.597088 113 5 0.75250 0.656402 0.58523 0.809689 0.815806 0.788294 0.75252525 0.84701 0.76839 0.818182 0.81229 0.8693182 0.7878788 0.751894 0.7883523 0.742424 0.90152 0.7912232 0.758641 0.783704 0.687879 0.800426 0.792832 0.76763 0.67727 0.79672 0.76842 0.94034 0.75675 0.777460 0.74388 0.8686526 0.718794 0.668319 0.75025501 0.546402 0.641787 0.72462 0.74129 0.756672 0.78675 0.75656 0.741772 0 0.761966 0.776794 -1.0900e-02 5 0.746969 0.779403 -3.2433e-02 0.863573 5.2216e-01 insignificant 1 1.0000e+00 insignificant 0.842515 0.6953505 insignificant 1 1.00000 insignificant 0.0211338 0.6114080 lowCoverage 1 lowCoverage 0.761146 0.69656 0.0710213 5 0.709366 0.61488 0.0944871 1.3813e-02 9.9612e-01 weaklyHypermeth 1.8175e-01 1.0000e+00 insignificant 1.4953e-02 9.9965e-01 weaklyHypermeth 3.4774e-01 1.0000000 insignificant 0.09373202 0.07513042 lowCoverage 1.00000 lowCoverage 0.762364 0.72650 0.0337303 5 0.743290 0.55206 0.1912339 3.8266e-02 9.1577e-01 weaklyHypermeth 1.0000000 1.0000e+00 insignificant 0.0502773 9.6221e-01 insignificant 1.00000 1.000000 insignificant 0.10413651 7.6880e-02 lowCoverage 1.0000000 lowCoverage 0.77679 0.69790 0.0744070 5 0.779403 0.67637 0.10303578 1.7075e-02 0.99000978 weaklyHypermeth 2.3715e-01 1.000000 insignificant 9.6233e-03 0.9897918 weaklyHypermeth 2.1236e-01 1.00000 insignificant 0.07259817 0.19979502 lowCoverage 1.000000 lowCoverage 0.77547 0.72650 0.0376391 5 0.684861 0.55206 0.1328053 8.5715e-02 8.5067e-01 insignificant 1.00000000 1.00000000 insignificant 0.28563552 8.7770e-01 insignificant 1.000000 1.000000 insignificant 0.08300267 0.1724992 lowCoverage 1.00000 lowCoverage 0.69884 0.72650 -0.0340997 5 0.72814 0.55206 0.1760875 0.87589 7.2596e-02 insignificant 1 8.3444e-01 insignificant 0.754981 4.7789e-02 weaklyHypometh 1 0.8384010 insignificant 0.0104045 0.8659371 lowCoverage 1.00000 lowCoverage chrX 133546296 133547296 58997 MIR424 ENSG00000199097 0.80000 60 4 0.771429 27 4 0.81278 33 5 0.7588235 72 4 0.658333 37 4 0.837778 38 5 0.6166667 19 0 0.86848 66 5 0.74969 45 5 0.910000 21 1 0.74388 154 5 0.050000 8 0 0.633450 53 4 0.880000 21 4 0.675000 34 4 0.666667 3 0 0.333333 3 0 0.7730769 55 4 0.7857576 48 4 0.7428571 30 4 0.67857 24 1 0.852661 51 5 0.762302 38 5 0.90000 22 1 0.87949 64 4 0.71648 57 5 0.70476 28 3 0.40000 10 1 0.43571 33 4 0.684423 61 5 0.72116 34 5 0.7250000 34 4 0.542857 30 4 0.801961 74 5 0.5230769 53 4 0.816667 15 0 0.893333 28 1 0.76720 75 5 0.81970 49 4 0.805698 109 4 0.85801 88 4 0.56667 27 4 0.826667 79 4 0.80049 0.773399 0.83012 0.779919 0.661638 0.840996 0.63074713 0.79490 0.56233 0.918103 0.75212 0.0431034 0.6504200 0.872414 0.6831897 NA NA 0.6591512 0.791092 0.736453 0.831281 0.862310 0.769807 0.91379 0.80336 0.73574 0.72865 NA 0.46490 0.703332 0.71716 0.7392241 0.573892 0.811021 0.55968170 0.807471 0.908046 0.78530 0.82328 0.818843 0.85908 0.60632 0.828736 0 0.736397 0.730263 -6.9113e-06 4 0.846731 0.735791 1.1094e-01 0.702378 8.4288e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.860089 0.5859423 lowCoverage 1 1.00000 lowCoverage -0.0016470 0.9792535 lowCoverage 1 lowCoverage 0.736397 0.73455 -0.0024533 4 0.846731 0.73764 0.1090951 9.8033e-01 9.4006e-01 lowCoverage 1.0000e+00 1.0000e+00 lowCoverage 6.9254e-01 8.9056e-01 lowCoverage 1.0000e+00 1.0000000 lowCoverage -0.02078167 0.79211085 lowCoverage 1.00000 lowCoverage 0.732515 0.80114 -0.0617046 4 0.724115 0.78629 -0.0621720 9.9072e-01 5.2433e-02 lowCoverage 1.0000000 1.0000e+00 lowCoverage 0.9854657 4.3048e-02 lowCoverage 1.00000 1.000000 lowCoverage -0.07194729 3.2032e-01 lowCoverage 1.0000000 lowCoverage 0.73026 0.73455 -0.0040759 5 0.735791 0.73764 -0.00184403 9.2961e-01 0.79236969 insignificant 1.0000e+00 1.000000 insignificant 5.6391e-01 0.8496421 insignificant 1.0000e+00 1.00000 insignificant -0.01913471 0.80863451 lowCoverage 1.000000 lowCoverage 0.72991 0.80114 -0.0585716 4 0.724425 0.78629 -0.0618625 9.7983e-01 1.7175e-01 lowCoverage 1.00000000 1.00000000 lowCoverage 0.86560430 3.6441e-01 lowCoverage 1.000000 1.000000 lowCoverage -0.07030033 0.3331643 lowCoverage 1.00000 lowCoverage 0.73507 0.80114 -0.0531560 4 0.72774 0.78629 -0.0585432 0.93144 1.3966e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.817784 3.2171e-01 lowCoverage 1 1.0000000 lowCoverage -0.0511656 0.5486932 lowCoverage 1.00000 lowCoverage chrX 133636796 133637796 59004 PLAC1 ENSG00000170965 0.67395 358 8 0.71626 278 8 0.42204 192 8 0.733575 269 8 0.77863 161 8 0.75744 375 8 0.725901 165 8 0.75130 236 8 0.64718 194 8 0.75285 155 8 0.67855 376 9 0.571970 65 4 0.8186309 212 8 0.803616 88 5 0.568370 200 8 0.5951598 67 4 0.778237 78 6 0.548286 308 8 0.727525 219 5 0.71418 304 9 0.701709 68 5 0.682399 69 5 0.64507 219 8 0.48464 130 8 0.597028 93 5 0.749244 285 8 0.65884 119 7 0.43517 92 5 0.80370 253 8 0.672704 273 8 0.62714 284 8 0.515060 361 8 0.720419 289 8 0.59504 173 8 0.67441 195 8 0.50719 49 4 0.600659 153 8 0.63008 320 8 0.75060 269 8 0.645154 305 8 0.821243 231 8 0.70364 229 8 0.6522617 277 8 0.67861 0.665109 0.59512 0.710769 0.655656 0.721607 0.699405 0.68854 0.682486 0.72436 0.66124 0.647190 0.719253 0.703691 0.653133 0.6396533 0.656597 0.686205 0.715873 0.73071 0.731423 0.701157 0.643161 0.68176 0.630202 0.70075 0.647001 0.55232 0.73270 0.724691 0.70368 0.700320 0.6189933 0.59549 0.60618 0.63005 0.618949 0.63863 0.71482 0.653981 0.744101 0.72559 0.7294854 5 0.67628 0.67898 -0.00255855 8 0.69684 0.60722 8.9615e-02 7.2570e-02 0.86272826 insignificant 1.00000000 1.00000 insignificant 0.080773 0.9785766 insignificant 1 1 insignificant 0.05712377 0.152620 insignificant 1 insignificant 0.67628 0.60729 0.06330999 8 0.69684 0.65926 0.03757339 1.1570e-03 9.9427e-01 weaklyHypermeth 1.4603e-02 1.000000 weaklyHypermeth 6.4926e-04 0.9926808 weaklyHypermeth 1.5160e-02 1 weaklyHypermeth 0.0668823 0.10137148 insignificant 1.000000 insignificant 0.67628 0.69260 -0.0270405 8 0.69684 0.70632 -0.00948157 0.9313030 6.6060e-02 insignificant 1.00000 1.0000e+00 insignificant 0.984458 7.0805e-02 insignificant 1 1.0000e+00 insignificant -0.02639699 0.5256064 insignificant 1 insignificant 0.67898 0.60729 0.0669542 8 0.60722 0.65926 -0.0520416 8.8544e-04 8.3850e-01 weaklyHypermeth 1.1814e-02 1.000000 weaklyHypermeth 9.5373e-03 0.714260 weaklyHypermeth 1.7816e-01 1 insignificant 0.0097586 0.82464145 insignificant 1.000000 insignificant 0.67898 0.69260 -0.0223359 8 0.60722 0.70632 -0.09909661 9.7259e-01 3.1286e-02 weaklyHypometh 1.0000000 1.0000e+00 insignificant 0.999392 0.0263553 weaklyHypometh 1 1 insignificant -0.0835208 0.091608 insignificant 1 insignificant 0.60729 0.69260 -0.0915624 8 0.65926 0.70632 -0.04705497 1.0000e+00 1.1541e-05 weaklyHypometh 1.0000000 3.9186e-04 weaklyHypometh 0.999961 4.1251e-05 weaklyHypometh 1 0.00385288 weaklyHypometh -0.0932793 0.0662214 insignificant 0.99759 insignificant chrX 133797996 133798996 59014 FAM122C ENSG00000156500 0.64374 160 6 0.47355 131 6 0.64815 45 6 0.772476 137 6 0.65278 23 0 0.58467 104 6 0.592593 53 6 0.69490 77 6 0.68519 39 3 0.65476 27 3 0.66916 116 6 0.736111 19 0 0.4259259 33 3 0.727579 52 6 0.708333 22 0 0.5000000 24 3 0.333333 3 0 0.587302 123 5 0.726471 85 6 0.78333 40 3 0.591667 19 3 1.000000 3 0 0.68981 34 3 0.56296 35 6 0.819048 66 3 0.713747 91 6 0.63333 20 3 0.75000 8 0 0.64583 49 6 0.736941 79 6 0.66886 85 6 0.529915 93 6 0.584010 100 6 0.61012 66 6 0.56198 85 6 0.63889 21 3 0.525480 73 4 0.57579 89 6 0.69597 115 6 0.600980 98 6 0.619577 133 6 0.78056 55 3 0.7430435 114 6 0.63332 0.535111 0.65785 0.728127 0.660053 0.613819 0.641093 0.66556 0.675485 0.57370 0.57572 0.699735 0.532628 0.660752 0.719577 0.5873016 0.560232 0.645503 0.705415 0.66984 0.618560 0.929671 0.701940 0.70688 0.743328 0.71787 0.703175 0.98587 0.67857 0.708067 0.62188 0.648352 0.5741256 0.60232 0.58228 0.62434 0.551770 0.56522 0.66144 0.641145 0.649232 0.79656 0.6756023 0 0.64813 0.68739 -0.03529228 6 0.59355 0.60805 -1.4498e-02 9.7554e-01 0.11793619 insignificant 1.00000000 1.00000 insignificant 0.997684 0.0931951 insignificant 1 1 insignificant -0.06515882 0.162577 lowCoverage 1 lowCoverage 0.64863 0.58525 0.06783344 6 0.66775 0.56759 0.10015465 2.0823e-02 9.9988e-01 weaklyHypermeth 2.0690e-01 1.000000 insignificant 5.0518e-02 0.9994667 insignificant 5.4865e-01 1 insignificant 0.0473071 0.13964480 lowCoverage 1.000000 lowCoverage 0.64863 0.67767 -0.0274054 6 0.66775 0.63946 0.02828892 0.9121238 2.8832e-01 insignificant 1.00000 1.0000e+00 insignificant 0.740548 5.0805e-01 insignificant 1 1.0000e+00 insignificant -0.05800806 0.2144039 lowCoverage 1 lowCoverage 0.68977 0.58525 0.1043080 6 0.68406 0.56759 0.1164648 1.2549e-03 9.9992e-01 weaklyHypermeth 1.5510e-02 1.000000 weaklyHypermeth 1.1661e-02 0.999992 weaklyHypermeth 2.0457e-01 1 insignificant 0.1124659 0.01322863 lowCoverage 0.424359 lowCoverage 0.68977 0.67767 0.0090997 6 0.68406 0.63946 0.04459910 6.9507e-01 8.8172e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.490972 0.9835519 insignificant 1 1 insignificant 0.0071508 0.889202 lowCoverage 1 lowCoverage 0.58525 0.67767 -0.0954759 6 0.56759 0.63946 -0.07186573 9.9991e-01 8.2458e-03 weaklyHypometh 1.0000000 1.0697e-01 insignificant 0.999951 1.0410e-01 insignificant 1 1.00000000 insignificant -0.1053152 0.0345539 weaklyHypometh 0.64547 insignificant chrX 133869796 133870796 59020 MOSPD1 ENSG00000101928 0.79158 91 5 0.80476 72 5 0.69870 54 5 0.869424 106 5 0.79022 47 5 0.71541 128 5 0.620635 36 4 0.73618 80 5 0.68225 49 5 0.57778 33 5 0.77159 186 5 0.950000 10 0 0.8551282 62 5 0.770000 23 3 0.764286 39 5 0.8000000 9 0 0.766667 14 0 0.762952 111 5 0.672222 64 5 0.75810 103 5 0.766667 24 4 0.851667 30 5 0.81010 53 5 0.75496 49 5 0.800556 38 5 0.837623 88 5 0.68349 52 5 0.90000 12 0 0.70887 66 5 0.722438 103 5 0.72912 66 5 0.786676 164 5 0.730277 109 5 0.70286 64 5 0.83077 72 5 0.60000 6 0 0.818788 48 5 0.76720 89 5 0.86389 71 5 0.671836 125 5 0.687436 113 5 0.89111 45 5 0.8031885 130 5 0.79682 0.805039 0.70568 0.869384 0.795424 0.715217 0.614249 0.73829 0.824283 0.57494 0.77545 0.941860 0.859273 0.761047 0.757890 0.8139535 0.767442 0.753134 0.673127 0.75858 0.755426 0.844961 0.808786 0.75557 0.788921 0.80416 0.768801 0.88372 0.71830 0.720100 0.73061 0.789020 0.7258020 0.69601 0.79070 0.62791 0.813707 0.75996 0.86082 0.805797 0.689532 0.89147 0.8029416 0 0.76234 0.77254 -0.01123164 5 0.63488 0.81041 -1.7553e-01 8.9813e-01 0.68243676 insignificant 1.00000000 1.00000 insignificant 0.875713 0.2848461 insignificant 1 1 insignificant -0.02145383 0.424215 lowCoverage 1 lowCoverage 0.76234 0.75515 0.00609862 5 0.63488 0.79564 -0.16076286 4.6528e-01 7.4727e-01 insignificant 1.0000e+00 1.000000 insignificant 8.3344e-01 0.5702597 insignificant 1.0000e+00 1 insignificant 0.0162452 0.69183772 lowCoverage 1.000000 lowCoverage 0.76234 0.79834 -0.0336809 5 0.63488 0.82917 -0.19429178 0.9914535 3.5328e-01 insignificant 1.00000 1.0000e+00 insignificant 0.991331 2.5171e-01 insignificant 1 1.0000e+00 insignificant -0.02559857 0.6189770 lowCoverage 1 lowCoverage 0.77254 0.75515 0.0199679 5 0.81041 0.79564 0.0147649 1.7952e-01 8.9118e-01 insignificant 1.0000e+00 1.000000 insignificant 5.5954e-01 0.952420 insignificant 1.0000e+00 1 insignificant 0.0376991 0.36668530 lowCoverage 1.000000 lowCoverage 0.77181 0.79710 -0.0226223 5 0.73280 0.74688 -0.01407297 9.9783e-01 6.8656e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.964063 0.6054637 insignificant 1 1 insignificant -0.0041447 0.934924 lowCoverage 1 lowCoverage 0.75515 0.79834 -0.0406278 5 0.79564 0.82917 -0.03352891 9.7725e-01 1.1856e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.986276 2.9630e-01 insignificant 1 1.00000000 insignificant -0.0418438 0.4816878 lowCoverage 1.00000 lowCoverage chrX 133926796 133927796 59023 ENSG00000220934 0.81854 381 10 0.72629 160 9 0.49350 271 11 0.713965 140 9 0.79333 97 10 0.71199 479 9 0.628974 230 11 0.83307 198 10 0.71177 223 10 0.77019 213 10 0.75602 303 11 0.718914 66 7 0.7483780 258 11 NA 0 0 0.729137 135 7 0.7236874 70 6 0.687788 117 9 0.720658 148 9 0.707024 285 11 0.78392 486 10 0.704644 106 9 0.586006 166 9 0.71477 170 8 0.75422 179 10 0.821998 98 9 0.777647 287 9 0.70138 237 9 0.74276 122 9 0.66375 191 11 0.743896 254 9 0.71812 247 8 0.785590 572 11 0.436586 181 10 0.45178 188 10 0.58800 253 9 0.69248 105 8 0.581391 139 9 0.61068 281 8 0.71166 289 8 0.724418 216 9 0.813575 221 9 0.77522 278 9 0.7169850 195 9 0.76960 0.684312 0.55332 0.749738 0.767857 0.693037 0.587106 0.79126 0.700187 0.74483 0.71477 0.666771 0.715552 NA 0.711073 0.7056006 0.585050 0.759819 0.657691 0.74610 0.676787 0.606049 0.684938 0.75161 0.803887 0.76872 0.692505 0.76935 0.73974 0.690633 0.67842 0.717359 0.4783627 0.44122 0.59553 0.66021 0.555326 0.58391 0.74989 0.756471 0.767507 0.73424 0.7251043 7 0.72019 0.74059 -0.02477430 9 0.71768 0.74338 -2.5704e-02 8.3422e-01 0.10151901 insignificant 1.00000000 1.00000 insignificant 0.559643 0.3189658 insignificant 1 1 insignificant -0.00111916 0.963868 insignificant 1 insignificant 0.72019 0.53793 0.17316246 9 0.71768 0.57410 0.14357423 1.2687e-09 9.9998e-01 weaklyHypermeth 3.9499e-08 1.000000 weaklyHypermeth 4.0373e-06 0.9999901 weaklyHypermeth 3.7709e-04 1 weaklyHypermeth 0.1649606 0.00705974 weaklyHypermeth 0.253608 insignificant 0.72019 0.75563 -0.0433837 9 0.71768 0.74370 -0.02602113 0.9829403 1.0703e-01 insignificant 1.00000 1.0000e+00 insignificant 0.942027 3.0612e-01 insignificant 1 1.0000e+00 insignificant -0.02325936 0.3915390 insignificant 1 insignificant 0.74059 0.53793 0.1874773 8 0.74338 0.57410 0.1692778 8.0081e-10 9.9968e-01 weaklyHypermeth 4.1553e-08 1.000000 weaklyHypermeth 7.3103e-07 0.998025 weaklyHypermeth 5.6899e-05 1 weaklyHypermeth 0.1660797 0.00679988 weaklyHypermeth 0.288686 insignificant 0.74059 0.75563 -0.0186757 9 0.74338 0.74370 -0.00031754 7.1177e-01 2.6346e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.707037 0.3657157 insignificant 1 1 insignificant -0.0221402 0.424114 insignificant 1 insignificant 0.53793 0.75563 -0.2035192 8 0.57410 0.74370 -0.16959537 1.0000e+00 2.0778e-07 hypomethylated 1.0000000 1.6172e-05 hypomethylated 0.999999 6.3204e-06 hypomethylated 1 0.00147581 hypomethylated -0.1882199 0.0037605 weaklyHypometh 0.25088 insignificant chrX 133928396 133929396 59024 ENSG00000220934 0.67441 250 9 0.57788 222 10 0.53642 132 9 0.615681 211 9 0.57652 121 9 0.68897 516 11 0.549262 153 9 0.65596 183 10 0.55516 119 10 0.58417 147 10 0.66685 323 11 0.444052 119 9 0.5901813 159 10 0.714286 33 5 0.656245 148 10 0.4751282 93 9 0.476540 218 9 0.710589 253 10 0.613019 229 10 0.68120 343 10 0.684512 77 6 0.614296 90 10 0.61878 187 9 0.51010 82 7 0.675519 96 8 0.580415 261 10 0.61327 118 10 0.55904 92 7 0.66078 96 10 0.518665 211 10 0.68474 233 10 0.660272 452 11 0.506952 182 10 0.58498 138 9 0.60767 247 10 0.42639 50 5 0.597247 118 7 0.61039 222 10 0.57688 238 9 0.596279 280 9 0.682093 248 9 0.61347 217 8 0.6982148 277 9 0.64313 0.568058 0.59339 0.630510 0.592813 0.702048 0.579784 0.65199 0.545679 0.62685 0.66194 0.620024 0.620486 0.667456 0.688222 0.5478237 0.599818 0.684283 0.654293 0.69142 0.658523 0.621399 0.622238 0.60816 0.693743 0.60774 0.552029 0.62943 0.68913 0.624668 0.61594 0.678638 0.5517465 0.56706 0.61836 0.46062 0.641479 0.60140 0.63950 0.647661 0.697360 0.63634 0.6706330 5 0.62588 0.64612 -0.00707691 10 0.64909 0.61911 2.9977e-02 4.2939e-01 0.37122981 insignificant 1.00000000 1.00000 insignificant 0.402020 0.4940004 insignificant 1 1 insignificant -0.01290592 0.613735 insignificant 1 insignificant 0.62588 0.59666 0.04115558 10 0.64909 0.57852 0.07056760 5.5843e-03 9.1304e-01 weaklyHypermeth 6.0648e-02 1.000000 weaklyHypermeth 6.0254e-02 0.9835733 insignificant 6.2530e-01 1 insignificant 0.0465214 0.21835842 insignificant 1.000000 insignificant 0.62563 0.63730 -0.0140853 9 0.61126 0.64018 -0.02891551 0.7199911 7.7628e-02 insignificant 1.00000 1.0000e+00 insignificant 0.918395 1.5045e-01 insignificant 1 1.0000e+00 insignificant -0.03126139 0.3235951 insignificant 1 insignificant 0.64612 0.59666 0.0462753 10 0.61911 0.57852 0.0405907 4.6760e-04 8.9539e-01 weaklyHypermeth 7.2790e-03 1.000000 weaklyHypermeth 1.7506e-02 0.938418 weaklyHypermeth 2.5547e-01 1 insignificant 0.0594274 0.12608268 insignificant 1.000000 insignificant 0.64629 0.63730 -0.0199029 9 0.61624 0.64018 -0.02393871 9.3579e-01 2.0863e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.955207 0.2291723 insignificant 1 1 insignificant -0.0183555 0.555511 insignificant 1 insignificant 0.59748 0.63730 -0.0666440 9 0.59280 0.64018 -0.04737852 9.3984e-01 5.8257e-05 weaklyHypometh 1.0000000 1.5114e-03 weaklyHypometh 0.980182 6.4086e-03 weaklyHypometh 1 0.13603806 insignificant -0.0777828 0.0750894 insignificant 1.00000 insignificant chrX 135758196 135759196 59052 ENSG00000219403 0.52535 309 8 0.52131 220 8 0.60256 121 8 0.601404 162 8 0.59415 91 7 0.55164 478 8 0.662299 137 8 0.59647 231 8 0.59269 179 7 0.57573 145 8 0.57690 297 8 0.580208 99 7 0.7058786 176 7 1.000000 11 0 0.641718 147 8 0.6148601 80 7 0.607323 62 7 0.600219 182 8 0.615750 225 8 0.59524 430 8 0.509043 47 4 0.588291 93 7 0.61823 165 8 0.66402 112 8 0.564123 83 8 0.592365 319 8 0.63596 100 6 0.65211 104 7 0.53940 202 8 0.522567 319 8 0.59973 342 8 0.672386 516 8 0.498354 197 8 0.52262 136 7 0.52342 279 8 0.58370 87 7 0.599737 110 8 0.58254 296 8 0.66085 312 8 0.656722 277 8 0.738225 255 8 0.62417 242 8 0.7085943 211 8 0.59687 0.579272 0.57518 0.597556 0.580955 0.618387 0.663970 0.61221 0.613077 0.64347 0.65572 0.569294 0.722612 0.660559 0.633707 0.6023019 0.593482 0.613663 0.691252 0.61361 0.521970 0.635605 0.648750 0.62942 0.559369 0.66574 0.642361 0.64931 0.57125 0.578985 0.61577 0.650032 0.5313388 0.54171 0.54428 0.61628 0.624119 0.60121 0.69465 0.660360 0.713008 0.63511 0.6860048 7 0.63882 0.64488 -0.00306317 8 0.58220 0.60259 -2.0385e-02 5.6702e-01 0.33224521 insignificant 1.00000000 1.00000 insignificant 0.536304 0.3073419 insignificant 1 1 insignificant 0.02156441 0.434383 insignificant 1 insignificant 0.64020 0.58371 0.05767495 8 0.61592 0.54718 0.06873058 8.9305e-09 8.3952e-01 weaklyHypermeth 2.4533e-07 1.000000 weaklyHypermeth 5.7265e-04 0.7808482 weaklyHypermeth 1.4857e-02 1 weaklyHypermeth 0.0663574 0.02759465 weaklyHypermeth 0.715928 insignificant 0.63882 0.67001 -0.0483392 8 0.58220 0.69361 -0.11140279 0.9889045 1.7041e-03 weaklyHypometh 1.00000 2.5318e-01 insignificant 0.977941 5.0291e-03 weaklyHypometh 1 4.2897e-01 insignificant -0.05962937 0.0658139 insignificant 1 insignificant 0.64536 0.58371 0.0618015 8 0.61541 0.54718 0.0682262 2.0573e-07 8.7794e-01 weaklyHypermeth 6.4051e-06 1.000000 weaklyHypermeth 5.5615e-04 0.879964 weaklyHypermeth 1.7315e-02 1 weaklyHypermeth 0.0447930 0.07671997 insignificant 1.000000 insignificant 0.64488 0.67001 -0.0441277 8 0.60259 0.69361 -0.09101776 9.9838e-01 1.4494e-02 weaklyHypometh 1.0000000 8.4297e-01 insignificant 0.998863 0.0221847 weaklyHypometh 1 1 insignificant -0.0811938 0.011354 weaklyHypometh 1 insignificant 0.58371 0.66924 -0.1046381 8 0.54718 0.65531 -0.10812121 9.9982e-01 1.0254e-06 weaklyHypometh 1.0000000 5.2904e-05 weaklyHypometh 0.999176 3.9474e-05 weaklyHypometh 1 0.00385288 weaklyHypometh -0.1259868 0.0012832 weaklyHypometh 0.25088 insignificant chrX 135799496 135800496 59056 RBMX ENSG00000147274 0.69319 244 5 0.68037 74 5 0.48721 101 6 0.726405 89 5 0.72762 83 4 0.86944 73 4 0.555556 87 5 0.80519 52 5 0.79091 25 1 0.82143 36 4 0.94441 123 5 0.572917 44 4 0.7470968 113 5 0.663667 79 4 0.733333 43 4 0.4375000 10 0 0.537736 106 1 0.456886 151 5 0.887500 44 1 0.73736 85 4 0.633333 19 2 1.000000 1 0 0.52580 142 5 0.71591 50 4 0.547619 16 1 0.625635 173 6 0.63333 44 4 0.77143 23 1 0.58967 92 5 0.678858 105 5 0.55761 128 5 0.738922 93 4 0.615655 84 5 0.60694 57 5 0.28696 48 5 0.33333 7 0 0.554619 72 5 0.66452 135 5 0.80899 271 5 0.787574 189 5 0.667630 122 4 0.54921 138 5 0.7150000 96 4 0.62220 0.787584 0.61835 0.744806 0.732993 0.947917 0.708333 0.90260 0.764610 0.79145 0.92894 0.634008 0.747120 0.637351 0.739583 0.4799897 NA 0.657153 0.860491 0.70775 0.785714 NA 0.650498 0.89651 0.776786 0.66675 0.737500 0.75000 0.71449 0.637468 0.63246 0.717306 0.7560547 0.71503 0.42904 NA 0.602155 0.59547 0.76327 0.778452 0.649727 0.57316 0.7120536 0 0.69434 0.66591 0.04142442 5 0.58974 0.59305 -3.3174e-03 2.7986e-01 0.83464030 insignificant 1.00000000 1.00000 insignificant 0.402507 0.7647985 insignificant 1 1 insignificant 0.02561046 0.610252 lowCoverage 1 lowCoverage 0.69434 0.60794 0.09328655 5 0.58974 0.58041 0.00932745 2.8171e-02 8.0390e-01 weaklyHypermeth 2.6312e-01 1.000000 insignificant 7.2369e-03 0.9755156 weaklyHypermeth 1.2070e-01 1 insignificant 0.1834479 0.03703946 lowCoverage 0.786247 lowCoverage 0.69794 0.68505 -0.0012392 5 0.67136 0.70420 -0.03284466 0.7951763 4.1402e-01 insignificant 1.00000 1.0000e+00 insignificant 0.450426 7.2146e-01 insignificant 1 1.0000e+00 insignificant -0.01189449 0.8391103 lowCoverage 1 lowCoverage 0.66591 0.60794 0.0584545 5 0.59305 0.58041 0.0126449 1.4761e-01 7.6114e-01 insignificant 1.0000e+00 1.000000 insignificant 5.1942e-02 0.867568 insignificant 5.8584e-01 1 insignificant 0.1578375 0.06721073 lowCoverage 1.000000 lowCoverage 0.67086 0.68505 -0.0470332 5 0.64644 0.70420 -0.05776223 9.5301e-01 1.7545e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.698666 0.4584658 insignificant 1 1 insignificant -0.0375049 0.545436 lowCoverage 1 lowCoverage 0.62660 0.68505 -0.0895605 5 0.67714 0.70420 -0.02706002 9.2472e-01 2.1537e-02 weaklyHypometh 1.0000000 2.2351e-01 insignificant 0.938763 4.1974e-02 weaklyHypometh 1 0.51584072 insignificant -0.1953424 0.0386094 lowCoverage 0.69348 lowCoverage chrX 138104796 138105796 59079 FGF13 ENSG00000129682 0.32649 340 7 0.11451 157 7 0.25839 211 7 0.083618 177 7 0.35233 136 7 0.10623 216 7 0.045710 164 7 0.51648 175 7 0.38278 144 7 0.27344 151 7 0.21895 213 7 0.094624 113 7 0.0063492 165 5 0.071429 82 3 0.422383 121 5 0.0000000 85 3 0.000000 8 0 0.043852 183 7 0.018869 160 7 0.48587 219 7 0.130952 30 2 0.000000 78 5 0.67347 65 7 0.20713 111 7 0.624884 210 7 0.847728 156 7 0.30077 178 6 0.39861 71 5 0.36467 169 7 0.075079 165 7 0.30333 282 7 0.098503 295 7 0.000000 113 7 0.47938 158 7 0.27778 220 3 0.20962 88 7 0.030280 154 7 0.22481 221 7 0.30574 515 7 0.028875 164 7 0.058243 450 7 0.52211 159 7 0.0454060 230 7 0.30543 0.112287 0.26255 0.095793 0.346445 0.075681 0.036214 0.51843 0.414679 0.21952 0.24449 0.094119 0.009855 0.045652 0.326936 0.0473571 0.072987 0.024897 0.024739 0.42818 0.060507 0.000000 0.821118 0.19088 0.588393 0.85045 0.205146 0.32623 0.28843 0.050710 0.24065 0.083306 0.0000000 0.45959 0.13469 0.14415 0.028978 0.18503 0.30012 0.016348 0.042528 0.46994 0.0399457 3 0.21149 0.32099 -0.09532220 7 0.19153 0.39888 -2.0735e-01 9.9994e-01 0.02008061 weaklyHypometh 1.00000000 1.00000 insignificant 0.998472 0.0290882 weaklyHypometh 1 1 insignificant -0.14431170 0.108987 insignificant 1 insignificant 0.21162 0.17122 0.04547569 7 0.21889 0.17441 0.04448575 1.6710e-01 9.6573e-01 insignificant 1.0000e+00 1.000000 insignificant 4.4782e-01 0.7807757 insignificant 1.0000e+00 1 insignificant -0.0125291 0.88127638 insignificant 1.000000 insignificant 0.21162 0.18392 0.0259434 7 0.21889 0.18772 0.03116806 0.3436710 8.9286e-01 insignificant 1.00000 1.0000e+00 insignificant 0.555048 7.8533e-01 insignificant 1 1.0000e+00 insignificant -0.00095844 0.9930044 insignificant 1 insignificant 0.32062 0.17122 0.1364560 7 0.31301 0.17441 0.1386044 2.0090e-02 9.9972e-01 weaklyHypermeth 1.9546e-01 1.000000 insignificant 6.0490e-02 0.997227 insignificant 6.4202e-01 1 insignificant 0.1317826 0.22684595 insignificant 1.000000 insignificant 0.32062 0.18392 0.1374465 7 0.31301 0.18772 0.12528669 1.8212e-02 9.9483e-01 weaklyHypermeth 1.0000000 1.0000e+00 insignificant 0.166689 0.9962130 insignificant 1 1 insignificant 0.1433533 0.273855 insignificant 1 insignificant 0.17086 0.18379 -0.0141492 7 0.15261 0.16426 -0.01165298 8.3058e-01 5.8289e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.906163 8.1427e-01 insignificant 1 1.00000000 insignificant 0.0115707 0.9259318 insignificant 1.00000 insignificant chrX 138816596 138817596 59096 ENSG00000208531,ENSG00000221375 0.66432 218 6 0.55724 215 9 0.59226 101 7 0.660000 161 5 0.52769 95 5 0.56110 292 9 0.668569 95 6 0.75901 177 8 0.66909 81 5 0.67487 114 9 0.67648 228 9 0.787518 54 2 0.6249399 126 6 0.701185 65 5 0.596055 130 9 0.6987654 43 3 0.365000 54 3 0.587750 165 6 0.728187 114 5 0.65176 263 9 0.597643 49 5 0.815978 81 7 0.61975 132 5 0.50415 85 6 0.846825 66 5 0.732723 172 6 0.56085 57 3 0.55324 51 4 0.65890 156 7 0.621134 214 8 0.74357 202 9 0.605207 337 9 0.579085 190 8 0.62600 125 7 0.57869 142 6 0.50595 45 4 0.649718 100 5 0.46463 174 7 0.59920 128 6 0.718119 192 7 0.642881 193 6 0.66333 146 5 0.7724391 176 6 0.73225 0.673676 0.67794 0.735548 0.747828 0.724849 0.691891 0.77141 0.709906 0.73177 0.72619 0.742389 0.677763 0.704759 0.624057 0.6866352 0.619978 0.731307 0.792372 0.75437 0.728059 0.854879 0.649710 0.66086 0.756132 0.71312 0.616015 0.61284 0.69354 0.703358 0.76479 0.727271 0.6431090 0.65710 0.61444 0.59664 0.640699 0.70241 0.76649 0.770037 0.777838 0.82294 0.8025313 2 0.71157 0.70350 -0.00031472 6 0.60337 0.64275 -3.9375e-02 8.4607e-01 0.31371266 insignificant 1.00000000 1.00000 insignificant 0.841512 0.4252031 insignificant 1 1 insignificant -0.01740829 0.645820 insignificant 1 insignificant 0.71188 0.63273 0.07021274 6 0.61199 0.64011 -0.02812065 7.4837e-04 9.9934e-01 weaklyHypermeth 9.9854e-03 1.000000 weaklyHypermeth 3.2573e-03 0.9882058 weaklyHypermeth 6.0846e-02 1 weaklyHypermeth 0.0702439 0.07384230 insignificant 1.000000 insignificant 0.71234 0.79880 -0.0668585 6 0.65366 0.61741 0.03624805 0.5687716 1.4326e-03 weaklyHypometh 1.00000 2.5318e-01 insignificant 0.841472 2.9987e-02 weaklyHypometh 1 1.0000e+00 insignificant -0.04160664 0.2877144 insignificant 1 insignificant 0.70419 0.63273 0.0698333 6 0.66853 0.64011 0.0284248 1.5687e-02 9.9917e-01 weaklyHypermeth 1.5925e-01 1.000000 insignificant 1.9584e-02 0.997113 weaklyHypermeth 2.7714e-01 1 insignificant 0.0876522 0.05643094 insignificant 0.976046 insignificant 0.70401 0.79880 -0.0695973 6 0.65465 0.61741 0.03723791 2.3813e-01 2.5816e-02 weaklyHypometh 1.0000000 1.0000e+00 insignificant 0.586246 0.1767570 insignificant 1 1 insignificant -0.0241983 0.585941 insignificant 1 insignificant 0.63226 0.79952 -0.1399248 6 0.60739 0.62808 -0.02068869 9.8981e-01 3.3633e-05 weaklyHypometh 1.0000000 9.8167e-04 weaklyHypometh 0.996082 3.2090e-04 weaklyHypometh 1 0.01873274 weaklyHypometh -0.1118506 0.0255629 weaklyHypometh 0.59689 insignificant chrX 141108796 141109796 59122 ENSG00000220777 0.79270 346 7 0.64475 68 7 0.75514 89 7 0.827915 147 7 0.84382 65 7 0.81901 248 7 0.752341 105 7 0.80872 91 7 0.70476 79 7 0.76498 95 7 0.85989 157 7 0.817347 53 7 0.8474097 91 7 NA 0 0 0.861565 115 7 0.7787115 76 4 0.841883 93 7 0.893527 189 7 0.698523 106 7 0.88767 255 7 0.676190 28 2 0.882540 68 7 0.81996 160 7 0.68802 39 3 0.938776 60 6 0.760151 148 7 0.68452 65 6 0.74203 55 4 0.83703 80 7 0.824919 126 7 0.78710 104 7 0.816833 327 7 0.659511 69 6 0.83933 99 7 0.74226 105 7 0.88776 83 7 0.770692 70 7 0.85266 129 7 0.82835 319 7 0.882274 205 7 0.823087 213 7 0.86661 245 7 0.8622635 224 7 0.81773 0.693096 0.78287 0.855106 0.879881 0.845800 0.778385 0.84001 0.747458 0.79534 0.88079 0.842239 0.851014 NA 0.876500 0.8231838 0.861688 0.898414 0.749341 0.88752 0.667228 0.895085 0.838721 0.72079 0.923077 0.78169 0.728646 0.75301 0.85465 0.855040 0.81452 0.829954 0.6944509 0.83878 0.76723 0.89480 0.803791 0.86227 0.83547 0.897317 0.843759 0.88679 0.8875786 4 0.82172 0.81587 0.01264221 7 0.81117 0.80330 7.8746e-03 1.3397e-01 0.77174959 insignificant 1.00000000 1.00000 insignificant 0.249445 0.5533408 insignificant 1 1 insignificant 0.01186280 0.677844 insignificant 1 insignificant 0.82172 0.82162 0.00828128 7 0.81117 0.81078 0.00039101 1.0616e-01 5.7930e-01 insignificant 8.6973e-01 1.000000 insignificant 9.6978e-02 0.8402151 insignificant 9.4352e-01 1 insignificant 0.0079987 0.83795852 insignificant 1.000000 insignificant 0.82172 0.84080 -0.0318451 7 0.81117 0.84666 -0.03548931 0.9857349 1.1490e-01 insignificant 1.00000 1.0000e+00 insignificant 0.995830 6.5761e-02 insignificant 1 1.0000e+00 insignificant -0.05248120 0.0134306 weaklyHypometh 1 insignificant 0.81587 0.82162 -0.0043362 7 0.80330 0.81078 -0.0074836 4.7613e-01 5.1888e-01 insignificant 1.0000e+00 1.000000 insignificant 1.8104e-01 0.797480 insignificant 1.0000e+00 1 insignificant -0.0038641 0.92809346 insignificant 1.000000 insignificant 0.81587 0.84080 -0.0433229 7 0.80330 0.84666 -0.04336389 9.9778e-01 7.5514e-02 insignificant 1.0000000 1.0000e+00 insignificant 0.987758 0.0348562 weaklyHypometh 1 1 insignificant -0.0643440 0.027228 weaklyHypometh 1 insignificant 0.82162 0.84080 -0.0389324 7 0.81078 0.84666 -0.03588031 9.8247e-01 5.1226e-02 insignificant 1.0000000 4.8929e-01 insignificant 0.999341 2.6619e-02 weaklyHypometh 1 0.37669754 insignificant -0.0604799 0.1460529 insignificant 1.00000 insignificant chrX 144649396 144650396 59159 ENSG00000219938 0.58682 407 12 0.56162 199 11 0.56369 143 12 0.682936 283 12 0.65500 86 9 0.68121 482 12 0.626563 129 9 0.67355 184 11 0.47577 121 11 0.68594 129 11 0.64586 443 12 0.752143 63 7 0.6057290 200 12 0.787500 39 5 0.590680 146 7 0.5352557 100 9 0.720274 68 7 0.702975 220 12 0.716767 266 10 0.73030 456 13 0.581973 119 8 0.614246 109 5 0.77411 204 12 0.70108 139 9 0.587825 83 9 0.620394 225 12 0.73892 248 6 0.56450 99 5 0.75137 201 12 0.657973 245 12 0.72038 313 13 0.734345 451 14 0.607228 148 11 0.62655 203 12 0.50683 179 10 0.56157 81 7 0.648708 320 8 0.65197 240 12 0.67704 429 14 0.693373 316 12 0.748595 335 14 0.75578 341 9 0.6933853 276 13 0.70893 0.720206 0.66216 0.771376 0.741864 0.733534 0.696627 0.76167 0.614450 0.79006 0.71336 0.756140 0.737549 0.789705 0.694808 0.6932495 0.757663 0.735223 0.787737 0.78289 0.718612 0.702140 0.814595 0.81055 0.749081 0.77225 0.801070 0.68059 0.75686 0.758930 0.77272 0.800875 0.6072616 0.73538 0.61098 0.69543 0.722122 0.69975 0.79187 0.801766 0.783495 0.77948 0.7821408 2 0.70533 0.76847 -0.02728189 12 0.65601 0.67487 -1.8864e-02 9.4031e-01 0.06397509 insignificant 1.00000000 1.00000 insignificant 0.895040 0.2074031 insignificant 1 1 insignificant -0.02156461 0.447767 insignificant 1 insignificant 0.70533 0.68318 0.06086353 12 0.65601 0.58949 0.06651349 4.3864e-03 9.8642e-01 weaklyHypermeth 4.9962e-02 1.000000 weaklyHypermeth 3.0672e-02 0.9761864 weaklyHypermeth 3.5810e-01 1 insignificant 0.0485520 0.12260521 insignificant 1.000000 insignificant 0.70533 0.71479 -0.0453271 12 0.65601 0.69441 -0.03840272 0.9974718 2.1685e-03 weaklyHypometh 1.00000 2.5318e-01 insignificant 0.995559 6.3881e-04 weaklyHypometh 1 1.4916e-01 insignificant -0.06460479 0.0166241 weaklyHypometh 1 insignificant 0.76847 0.68318 0.0928772 12 0.67487 0.58949 0.0853774 1.7251e-04 9.9970e-01 weaklyHypermeth 3.0986e-03 1.000000 weaklyHypermeth 1.1828e-02 0.999501 weaklyHypermeth 2.0457e-01 1 insignificant 0.0701166 0.04470818 weaklyHypermeth 0.869947 insignificant 0.76847 0.71479 -0.0134334 12 0.67487 0.69441 -0.01953880 8.7762e-01 2.7398e-02 weaklyHypometh 1.0000000 1.0000e+00 insignificant 0.892081 0.0767881 insignificant 1 1 insignificant -0.0430402 0.130793 insignificant 1 insignificant 0.68318 0.71479 -0.1010281 12 0.58949 0.69441 -0.10491622 9.9979e-01 4.0204e-06 weaklyHypometh 1.0000000 1.5646e-04 weaklyHypometh 0.999586 2.1724e-04 weaklyHypometh 1 0.01449289 weaklyHypometh -0.1131568 0.0033587 weaklyHypometh 0.25088 insignificant chrX 146773196 146774196 59162 ENSG00000202051 0.70386 236 7 0.67786 136 7 0.66194 114 7 0.765625 138 7 0.72166 44 3 0.57050 238 7 0.627039 128 7 0.70374 106 7 0.65688 115 7 0.72349 124 7 0.62587 274 7 0.681944 79 7 0.6826240 193 7 0.750000 12 2 0.649677 112 7 0.5158730 46 6 0.646854 72 6 0.707391 161 7 0.730044 202 7 0.70126 230 7 0.567917 78 7 0.736766 101 7 0.60873 199 7 0.49074 57 6 0.674603 50 6 0.706346 155 7 0.70698 101 7 0.70527 84 7 0.64910 120 7 0.762534 176 7 0.64366 165 7 0.661395 353 7 0.632962 163 7 0.67560 105 7 0.70121 251 7 0.62363 99 6 0.584615 83 7 0.72065 197 7 0.70937 251 7 0.638349 248 7 0.698709 170 7 0.69172 205 7 0.7360624 210 7 0.73794 0.658933 0.69972 0.770010 0.729584 0.693071 0.658216 0.74044 0.675694 0.75614 0.73869 0.685749 0.763835 0.753024 0.680169 0.5925926 0.660583 0.739620 0.737807 0.75852 0.712591 0.708489 0.694966 0.65097 0.697262 0.71159 0.728944 0.74169 0.67263 0.757325 0.67241 0.702324 0.6696781 0.70053 0.68870 0.66040 0.631466 0.75845 0.73276 0.770921 0.722656 0.72126 0.7683177 6 0.72717 0.70836 0.01200052 7 0.65432 0.61712 3.7202e-02 3.4318e-01 0.79431665 insignificant 1.00000000 1.00000 insignificant 0.554171 0.7006575 insignificant 1 1 insignificant 0.01570235 0.547307 insignificant 1 insignificant 0.72767 0.69376 0.02438331 7 0.69290 0.70184 -0.00893879 5.9960e-02 9.3975e-01 insignificant 5.2786e-01 1.000000 insignificant 1.2981e-01 0.9412139 insignificant 1.0000e+00 1 insignificant 0.0187620 0.46991116 insignificant 1.000000 insignificant 0.72767 0.76015 -0.0249421 7 0.69290 0.62388 0.06902227 0.6162362 2.4600e-01 insignificant 1.00000 1.0000e+00 insignificant 0.697797 2.8222e-01 insignificant 1 1.0000e+00 insignificant -0.01963470 0.3676189 insignificant 1 insignificant 0.70946 0.69376 0.0142007 7 0.64223 0.70184 -0.0596083 1.5695e-01 7.3218e-01 insignificant 1.0000e+00 1.000000 insignificant 7.8667e-02 0.941911 insignificant 7.9864e-01 1 insignificant 0.0030597 0.92111773 insignificant 1.000000 insignificant 0.70946 0.76015 -0.0359653 7 0.64223 0.62388 0.01835271 4.9892e-01 5.6231e-02 insignificant 1.0000000 1.0000e+00 insignificant 0.493730 0.1731059 insignificant 1 1 insignificant -0.0353371 0.212698 insignificant 1 insignificant 0.69376 0.76015 -0.0470334 7 0.70184 0.62388 0.07796106 9.9697e-01 1.2502e-02 weaklyHypometh 1.0000000 1.4970e-01 insignificant 0.989640 1.6384e-02 weaklyHypometh 1 0.28338743 insignificant -0.0383967 0.1811846 insignificant 1.00000 insignificant chrX 149465940 149466940 59215 ENSG00000221004 0.52144 378 14 0.16870 256 13 0.44376 438 13 0.148125 235 11 0.34811 303 13 0.25007 277 10 0.238979 572 14 0.44047 387 14 0.38235 561 13 0.47886 443 13 0.44259 385 13 0.144065 247 10 0.4579980 541 13 0.168651 70 8 0.138067 331 13 0.1228516 224 13 0.305056 437 10 0.100789 209 9 0.790367 380 14 0.57622 450 13 0.417349 128 10 0.328288 156 11 0.25099 275 13 0.40839 201 12 0.506855 184 11 0.560254 440 13 0.45840 362 13 0.26138 207 15 0.41995 378 14 0.166530 338 13 0.73143 385 13 0.192700 635 13 0.011399 232 12 0.20754 260 14 0.31094 499 11 0.22044 118 10 0.076629 165 11 0.37654 448 13 0.56982 687 14 0.246867 240 11 0.238710 417 11 0.62562 395 13 0.1529081 201 8 0.50441 0.177232 0.35661 0.070829 0.395614 0.134120 0.213746 0.38528 0.398708 0.39196 0.47428 0.168816 0.445615 0.169165 0.109839 0.1453002 0.344845 0.077472 0.795798 0.57349 0.356224 0.201205 0.186219 0.54226 0.570718 0.54120 0.393488 0.30028 0.44246 0.095396 0.77844 0.163471 0.0216389 0.19227 0.24655 0.24498 0.058631 0.29311 0.54121 0.168139 0.147277 0.54997 0.1198284 8 0.34026 0.39288 -0.04553052 13 0.37422 0.35630 1.7916e-02 9.4275e-01 0.28256413 insignificant 1.00000000 1.00000 insignificant 0.998513 0.0655567 insignificant 1 1 insignificant -0.05849882 0.360965 insignificant 1 insignificant 0.34017 0.22791 0.12687603 13 0.33741 0.21706 0.12034976 1.1535e-07 9.9999e-01 weaklyHypermeth 2.4485e-06 1.000000 weaklyHypermeth 3.4262e-06 0.9999983 weaklyHypermeth 3.7709e-04 1 weaklyHypermeth 0.1327946 0.08370324 insignificant 1.000000 insignificant 0.34036 0.37732 -0.0221872 13 0.35849 0.50628 -0.14778237 0.9920202 3.1428e-01 insignificant 1.00000 1.0000e+00 insignificant 0.940911 7.5712e-01 insignificant 1 1.0000e+00 insignificant -0.03340930 0.7612403 insignificant 1 insignificant 0.39277 0.22764 0.1804848 13 0.35071 0.19421 0.1564979 2.3653e-07 9.9995e-01 weaklyHypermeth 6.9036e-06 1.000000 weaklyHypermeth 3.0055e-08 1.000000 weaklyHypermeth 3.5090e-06 1 weaklyHypermeth 0.1912934 0.02314783 weaklyHypermeth 0.568949 insignificant 0.39314 0.37732 0.0114942 13 0.38521 0.50628 -0.12106269 9.0039e-01 4.2720e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.382664 0.8649369 insignificant 1 1 insignificant 0.0250895 0.822502 insignificant 1 insignificant 0.22804 0.37732 -0.1557434 13 0.23062 0.50628 -0.27565399 1.0000e+00 7.2357e-08 weaklyHypometh 1.0000000 8.4476e-06 weaklyHypometh 0.999999 3.1897e-03 weaklyHypometh 1 0.08275507 weaklyHypometh -0.1662039 0.1817502 insignificant 1.00000 insignificant chrX 149466040 149467040 59216 ENSG00000221004 0.50724 540 19 0.12869 343 18 0.39073 650 18 0.112654 312 16 0.29060 386 17 0.18755 351 15 0.194092 753 19 0.42678 528 19 0.34666 686 18 0.40808 655 18 0.39623 552 18 0.111197 381 15 0.4080326 680 18 0.128170 122 12 0.105493 474 18 0.1033460 303 17 0.283266 445 11 0.074266 297 14 0.814768 576 19 0.57604 528 18 0.361536 167 14 0.293670 262 16 0.27944 342 18 0.36760 378 17 0.534637 231 16 0.521319 574 18 0.38468 673 18 0.22862 275 20 0.44255 576 19 0.123850 535 18 0.73392 459 18 0.165063 839 18 0.013663 343 17 0.20450 415 19 0.24103 750 16 0.18874 166 15 0.065873 196 15 0.31783 645 18 0.47659 864 19 0.192293 335 16 0.181596 617 16 0.51739 513 18 0.1019388 323 13 0.48780 0.124612 0.31415 0.050716 0.315547 0.092569 0.163527 0.38747 0.341135 0.33386 0.39956 0.122929 0.391661 0.133566 0.077771 0.1185175 0.292991 0.053471 0.826532 0.57225 0.285752 0.191503 0.254833 0.44159 0.587278 0.48725 0.321078 0.23084 0.47044 0.067348 0.76530 0.140908 0.0176802 0.18578 0.18586 0.18804 0.050598 0.23572 0.43008 0.126008 0.103058 0.44045 0.0827051 12 0.31406 0.34849 -0.03540023 18 0.34594 0.33422 1.1721e-02 9.6924e-01 0.37852761 insignificant 1.00000000 1.00000 insignificant 0.999968 0.0085543 weaklyHypometh 1 1 insignificant -0.07004525 0.298951 insignificant 1 insignificant 0.31398 0.18544 0.13525558 18 0.31621 0.19092 0.12528482 8.6829e-09 1.0000e+00 weaklyHypermeth 2.4533e-07 1.000000 weaklyHypermeth 3.3831e-07 1.0000000 weaklyHypermeth 5.2663e-05 1 weaklyHypermeth 0.1277554 0.06266548 insignificant 1.000000 insignificant 0.31412 0.29977 0.0305605 18 0.33127 0.40726 -0.07599722 0.6267212 7.1324e-01 insignificant 1.00000 1.0000e+00 insignificant 0.654274 9.5285e-01 insignificant 1 1.0000e+00 insignificant 0.00573176 0.9538471 insignificant 1 insignificant 0.34842 0.18529 0.1735315 18 0.33071 0.17501 0.1556949 3.1475e-09 1.0000e+00 weaklyHypermeth 1.3362e-07 1.000000 weaklyHypermeth 6.3288e-12 1.000000 weaklyHypermeth 1.4778e-09 1 weaklyHypermeth 0.1978006 0.01083888 weaklyHypermeth 0.389366 insignificant 0.34863 0.29977 0.0626662 18 0.35414 0.40726 -0.05312050 2.1771e-01 8.2007e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.010907 0.9890285 weaklyHypermeth 1 1 insignificant 0.0757770 0.465194 insignificant 1 insignificant 0.18551 0.29977 -0.0932715 18 0.20002 0.40726 -0.20724798 9.9981e-01 3.4401e-07 weaklyHypometh 1.0000000 2.2950e-05 weaklyHypometh 0.999986 6.7243e-03 weaklyHypometh 1 0.13653176 insignificant -0.1220236 0.2501707 insignificant 1.00000 insignificant chrX 149686040 149687040 59225 MTMR1 ENSG00000063601 0.92304 155 5 0.90108 89 5 0.81690 66 5 0.947817 76 5 0.93778 47 5 0.92525 99 5 0.903546 72 3 0.89688 84 5 0.96471 29 1 0.92354 59 5 0.83918 218 5 0.954545 24 1 0.8151515 56 3 0.887500 18 2 0.893333 30 3 1.0000000 14 1 0.846154 26 1 0.925775 94 2 0.963014 157 5 0.85626 120 5 0.778009 34 5 0.933333 40 5 0.86364 28 2 1.00000 45 5 0.896201 190 5 0.878236 189 5 0.92045 34 3 0.61111 17 1 0.86546 120 5 0.846996 110 5 0.88475 196 5 0.902771 138 5 0.760317 75 5 0.60211 188 5 0.97849 37 1 0.77185 129 5 0.859524 42 3 0.91314 217 5 0.84438 110 5 0.951876 84 5 0.934437 110 5 0.87231 100 3 0.8881918 58 5 0.93985 0.903489 0.81068 0.936796 0.902031 0.927063 0.890414 0.89147 0.895636 0.91228 0.82601 0.893052 0.755947 0.812911 0.933333 NA NA 0.940923 0.953723 0.84850 0.852842 0.802867 0.822581 1.00000 0.925109 0.82634 0.863025 0.72559 0.91261 0.839163 0.84683 0.898618 0.7667691 0.63904 0.84934 0.85472 0.870200 0.89147 0.82931 0.951053 0.911454 0.71372 0.8870259 1 0.89353 0.88344 0.01221520 5 0.89055 0.88223 8.3159e-03 1.9514e-01 0.73095304 insignificant 1.00000000 1.00000 insignificant 0.247897 0.9632856 insignificant 1 1 insignificant 0.04099382 0.191547 lowCoverage 1 lowCoverage 0.89353 0.77147 0.12839483 5 0.89055 0.77604 0.11450608 1.6381e-04 9.7860e-01 weaklyHypermeth 2.2500e-03 1.000000 weaklyHypermeth 1.8300e-02 0.8831248 weaklyHypermeth 2.5136e-01 1 insignificant 0.0918336 0.15408800 lowCoverage 1.000000 lowCoverage 0.89353 0.90260 -0.0017317 5 0.89055 0.89763 -0.00708907 0.7164378 5.8500e-01 insignificant 1.00000 1.0000e+00 insignificant 0.379218 8.8893e-01 insignificant 1 1.0000e+00 insignificant 0.00783438 0.7420668 lowCoverage 1 lowCoverage 0.88344 0.77147 0.1236911 5 0.88223 0.77604 0.1061902 1.7174e-03 9.1777e-01 weaklyHypermeth 2.0564e-02 1.000000 weaklyHypermeth 1.6032e-01 0.689798 insignificant 1.0000e+00 1 insignificant 0.0508398 0.42949705 lowCoverage 1.000000 lowCoverage 0.88344 0.90260 -0.0138367 5 0.88223 0.89763 -0.01540500 8.9555e-01 4.2687e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.772371 0.7202105 insignificant 1 1 insignificant -0.0331594 0.346183 lowCoverage 1 lowCoverage 0.77147 0.90260 -0.1554708 5 0.77604 0.89763 -0.12159516 9.7520e-01 1.8659e-02 weaklyHypometh 1.0000000 2.0265e-01 insignificant 0.865857 2.2483e-01 insignificant 1 1.00000000 insignificant -0.0839992 0.1943712 lowCoverage 1.00000 lowCoverage chrX 152196658 152197658 59275 ENSG00000217223 0.66506 42 4 0.79583 31 2 0.60714 34 4 0.750000 9 0 0.87500 16 1 0.88254 32 2 0.773810 12 1 0.91556 53 5 0.87500 23 2 0.71833 20 2 0.97129 112 5 0.500000 6 0 0.8621154 71 5 NA 0 0 0.888889 9 1 1.0000000 5 0 0.650000 10 1 0.643750 24 2 0.842857 67 5 0.79143 36 5 1.000000 18 2 0.593333 33 4 0.62394 28 3 0.88571 28 1 1.000000 22 2 0.863772 91 5 0.69496 50 4 0.83333 4 0 0.77826 54 4 0.978947 56 5 0.84926 85 5 0.812593 54 2 0.561296 51 3 0.32900 91 5 0.52083 26 3 0.25000 5 0 0.711111 11 1 0.37631 122 5 0.47500 28 2 0.966667 11 1 0.890909 29 2 0.63333 17 1 0.9000000 8 0 0.62756 0.747396 0.62500 0.671875 0.765625 0.817460 0.709821 0.91667 0.856771 0.70312 0.93745 0.523116 0.929087 NA 0.979167 0.9051484 0.866866 0.717970 0.897321 0.83333 1.000000 0.541667 0.539394 0.86161 1.000000 0.81590 0.800214 0.84375 0.74297 0.934211 0.82622 0.764352 0.5399884 0.34821 0.68195 0.22969 0.708333 0.43593 0.57552 0.895833 0.863636 0.79167 0.8437500 0 0.83170 0.81644 0.01577538 2 0.82200 0.83182 -9.8284e-03 2.1124e-01 0.31689596 lowCoverage 1.00000000 1.00000 lowCoverage 0.644305 0.3112099 lowCoverage 1 1 lowCoverage -0.03624880 0.472832 lowCoverage 1 lowCoverage 0.83170 0.35621 0.46956568 2 0.82200 0.37634 0.44565507 2.3824e-18 1.0000e+00 lowCoverage 2.7815e-16 1.000000 lowCoverage 1.2016e-05 0.9998947 lowCoverage 9.3525e-04 1 lowCoverage 0.3318345 0.00325645 lowCoverage 0.185350 lowCoverage 0.83170 0.72043 0.1221059 1 0.82200 0.67803 0.14397023 0.0060044 9.9964e-01 lowCoverage 0.46734 1.0000e+00 lowCoverage 0.744991 6.1576e-01 lowCoverage 1 1.0000e+00 lowCoverage 0.01674474 0.8719162 lowCoverage 1 lowCoverage 0.81644 0.35621 0.4633685 5 0.83182 0.37634 0.4554834 9.4280e-14 1.0000e+00 hypermethylated 1.1007e-11 1.000000 hypermethylated 3.1185e-05 1.000000 hypermethylated 1.3239e-03 1 hypermethylated 0.3680833 0.00157453 lowCoverage 0.100876 lowCoverage 0.81644 0.72043 0.0925282 2 0.83182 0.67803 0.15379859 1.6481e-02 9.8408e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage 0.859086 0.5581964 lowCoverage 1 1 lowCoverage 0.0529935 0.622656 lowCoverage 1 lowCoverage 0.35621 0.72043 -0.3756140 2 0.37634 0.67803 -0.30168484 9.9768e-01 4.5726e-05 lowCoverage 1.0000000 1.2561e-03 lowCoverage 0.999573 1.0506e-02 lowCoverage 1 0.18869525 lowCoverage -0.3150898 0.0279643 lowCoverage 0.60439 lowCoverage chrX 152329197 152330197 59281 MOAP1 ENSG00000214897 0.70495 446 15 0.45290 250 15 0.60299 325 15 0.406655 210 14 0.48345 184 13 0.51512 385 14 0.499402 291 12 0.61284 312 14 0.60557 156 14 0.52514 227 12 0.57302 486 14 0.333333 63 6 0.4842994 207 14 0.542779 121 12 0.538972 198 10 0.3571429 46 6 0.900000 10 1 0.423638 238 13 0.643951 540 14 0.70273 407 14 0.585915 98 7 0.516581 105 6 0.42121 190 13 0.59175 275 14 0.645250 451 8 0.660970 425 15 0.66060 346 13 0.32183 90 8 0.59980 459 14 0.454931 274 14 0.59182 533 15 0.736960 416 14 0.424259 235 14 0.70933 665 14 0.46310 642 11 0.68269 88 8 0.510085 179 13 0.40402 884 15 0.60028 502 14 0.483636 237 14 0.590982 425 14 0.61854 734 14 0.4500165 282 14 0.64216 0.342518 0.48540 0.274783 0.479927 0.373656 0.362850 0.58483 0.508945 0.57440 0.50377 0.383577 0.356473 0.380771 0.393256 0.4754727 NA 0.301870 0.568291 0.66415 0.452273 0.487216 0.374656 0.41506 0.578192 0.56887 0.533758 0.30269 0.45875 0.352531 0.43283 0.606665 0.3085851 0.63653 0.40681 0.34327 0.389728 0.32602 0.52045 0.330708 0.543433 0.59825 0.3510557 6 0.55819 0.61160 0.00262977 14 0.50285 0.57479 -7.1943e-02 9.1655e-01 0.21860038 insignificant 1.00000000 1.00000 insignificant 0.996475 0.3990363 insignificant 1 1 insignificant -0.02019026 0.657295 insignificant 1 insignificant 0.55846 0.46488 0.10274899 14 0.55043 0.46294 0.08749808 1.5307e-05 7.7408e-01 weaklyHypermeth 2.4649e-04 1.000000 weaklyHypermeth 2.9820e-01 0.5152541 insignificant 1.0000e+00 1 insignificant 0.0131958 0.83539164 insignificant 1.000000 insignificant 0.55846 0.55642 0.0049424 14 0.55043 0.52456 0.02586878 0.0023932 5.5056e-01 weaklyHypermeth 0.43101 1.0000e+00 insignificant 0.185095 7.8985e-01 insignificant 1 1.0000e+00 insignificant -0.00324747 0.9439589 insignificant 1 insignificant 0.61203 0.46508 0.1044347 14 0.61640 0.49419 0.1222185 1.9932e-04 7.7164e-01 weaklyHypermeth 3.4474e-03 1.000000 weaklyHypermeth 2.8801e-01 0.673886 insignificant 1.0000e+00 1 insignificant 0.0333861 0.61291352 insignificant 1.000000 insignificant 0.61181 0.55668 0.0175069 14 0.59083 0.55954 0.03129517 3.6509e-07 1.2599e-01 weaklyHypermeth 0.0001705 1.0000e+00 weaklyHypermeth 0.031482 0.8052068 weaklyHypermeth 1 1 insignificant 0.0169428 0.730974 insignificant 1 insignificant 0.46488 0.55642 -0.1013857 14 0.46294 0.52456 -0.06162930 8.9094e-01 1.3025e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.817513 7.6496e-01 insignificant 1 1.00000000 insignificant -0.0164433 0.8031483 insignificant 1.00000 insignificant chrX 152406297 152407297 59284 HAUS7 ENSG00000213397 0.75606 148 8 0.52322 119 7 0.75714 302 8 0.685877 67 5 0.89480 181 8 0.75676 184 9 0.620044 295 10 0.79168 251 10 0.64557 242 9 0.72360 265 10 0.78895 320 12 0.783221 117 10 0.6638330 269 9 0.892857 45 4 0.673286 136 8 0.6873810 48 4 0.619400 74 5 0.683810 75 5 0.685999 295 10 0.59505 275 12 0.540196 64 6 0.474288 96 7 0.67227 80 4 0.59358 281 11 0.776903 88 5 0.750722 294 11 0.62920 323 11 0.64520 124 8 0.69133 259 10 0.711726 178 10 0.77518 309 12 0.854354 329 12 0.164780 225 11 0.34514 470 10 0.19372 446 8 0.32603 52 3 0.145390 132 11 0.54031 378 9 0.69557 206 11 0.599982 100 8 0.610331 88 5 0.57672 136 6 0.4783148 83 7 0.85087 0.469748 0.72732 0.755111 0.879588 0.749818 0.752657 0.86357 0.717745 0.82592 0.83890 0.759778 0.530520 0.836226 0.623463 0.5743890 0.581650 0.490788 0.697704 0.74868 0.831029 0.330188 0.711995 0.74680 0.831253 0.81322 0.735473 0.84002 0.78344 0.699829 0.73081 0.889826 0.0870301 0.38802 0.10465 0.33157 0.104300 0.46388 0.73204 0.504347 0.604828 0.81637 0.4621930 4 0.74730 0.75175 -0.00910007 9 0.67809 0.60611 7.1981e-02 4.9363e-01 0.98525860 insignificant 1.00000000 1.00000 insignificant 0.450971 0.7151588 insignificant 1 1 insignificant 0.03518071 0.359403 insignificant 1 insignificant 0.74723 0.35311 0.41182010 9 0.68023 0.32059 0.35963872 7.1421e-38 1.0000e+00 hypermethylated 3.3354e-35 1.000000 hypermethylated 3.9007e-17 0.9999999 hypermethylated 1.8216e-14 1 hypermethylated 0.4255330 0.00051693 hypermethylated 0.060352 hypermethylated 0.74750 0.65630 0.0814152 6 0.71148 0.62593 0.08555182 0.0142607 9.8073e-01 weaklyHypermeth 0.83247 1.0000e+00 insignificant 0.009486 9.9404e-01 weaklyHypermeth 1 1.0000e+00 insignificant 0.11924135 0.0212031 weaklyHypermeth 1 insignificant 0.75529 0.35311 0.4185628 9 0.64476 0.32059 0.3241617 3.9597e-25 1.0000e+00 hypermethylated 1.8492e-22 1.000000 hypermethylated 2.7287e-15 1.000000 hypermethylated 1.2743e-12 1 hypermethylated 0.3903523 0.00054078 hypermethylated 0.063136 hypermethylated 0.75613 0.65738 0.0983878 7 0.67107 0.66766 0.00341311 2.3939e-02 8.7261e-01 weaklyHypermeth 1.0000000 1.0000e+00 insignificant 0.032438 0.9758891 weaklyHypermeth 1 1 insignificant 0.0840606 0.100815 insignificant 1 insignificant 0.35294 0.65523 -0.3594714 6 0.29976 0.62593 -0.32617023 1.0000e+00 6.0856e-10 hypomethylated 1.0000000 1.4210e-07 hypomethylated 1.000000 2.1095e-06 hypomethylated 1 0.00098513 hypomethylated -0.3062917 0.0026651 weaklyHypometh 0.25088 insignificant chrX 152562597 152563597 59286 DUSP9 ENSG00000130829 0.30997 1389 56 0.08982 598 45 0.11610 1160 55 0.015262 732 40 0.21143 561 34 0.15959 1058 54 0.034189 1323 49 0.19316 725 42 0.19546 753 51 0.23896 824 37 0.24754 975 34 0.027590 612 50 0.0703768 1044 45 0.164326 206 14 0.079186 578 40 0.0029412 523 25 0.076538 328 26 0.047138 900 46 0.039413 967 49 0.32648 1314 56 0.073787 340 30 0.099832 564 37 0.10169 534 46 0.16834 505 37 0.207978 843 40 0.197715 1210 54 0.13336 745 40 0.11149 355 31 0.27229 691 37 0.034615 804 51 0.24703 1180 50 0.351303 1368 55 0.015457 537 41 0.26673 834 40 0.13885 499 34 0.26610 498 40 0.114359 472 36 0.17497 1029 52 0.32068 1568 50 0.039729 833 43 0.334172 1255 50 0.39207 1500 50 0.0072209 705 41 0.33191 0.035779 0.13137 0.016392 0.244384 0.052979 0.022578 0.22922 0.192545 0.22235 0.32637 0.024041 0.027092 0.071574 0.034790 0.0026934 0.113651 0.018695 0.020995 0.28914 0.054232 0.067441 0.067622 0.21663 0.183494 0.26379 0.166500 0.11493 0.32684 0.026638 0.19783 0.287450 0.0090388 0.20199 0.14463 0.21678 0.057803 0.18051 0.34013 0.017999 0.337036 0.41864 0.0049671 17 0.14897 0.20234 -0.05317123 46 0.14523 0.19060 -4.5364e-02 1.0000e+00 0.00030248 weaklyHypometh 1.00000000 0.14126 insignificant 1.000000 0.0052267 weaklyHypometh 1 1 insignificant -0.03434669 0.331509 insignificant 1 insignificant 0.14903 0.16223 -0.00300145 38 0.15912 0.18965 -0.03052918 7.0267e-01 4.3432e-02 weaklyHypometh 1.0000e+00 1.000000 insignificant 9.5539e-01 0.6941181 insignificant 1.0000e+00 1 insignificant -0.0304709 0.51756904 insignificant 1.000000 insignificant 0.14874 0.26173 -0.1171931 49 0.15182 0.27090 -0.11907849 1.0000000 3.0725e-33 weaklyHypometh 1.00000 1.4349e-30 weaklyHypometh 1.000000 6.7434e-08 weaklyHypometh 1 3.1491e-05 weaklyHypometh -0.08650009 0.3529080 insignificant 1 insignificant 0.20225 0.16210 0.0466235 38 0.18799 0.17792 0.0100656 1.7702e-03 7.7571e-01 weaklyHypermeth 2.0667e-02 1.000000 weaklyHypermeth 7.8502e-02 0.998567 insignificant 7.9864e-01 1 insignificant 0.0038758 0.93651574 insignificant 1.000000 insignificant 0.20209 0.26160 -0.0602122 46 0.18691 0.26001 -0.07310116 1.0000e+00 2.0126e-15 weaklyHypometh 1.0000000 9.3988e-13 weaklyHypometh 0.999991 0.0026534 weaklyHypometh 1 1 insignificant -0.0521534 0.567131 insignificant 1 insignificant 0.16073 0.26173 -0.1044508 38 0.18194 0.27090 -0.08895936 1.0000e+00 6.9699e-13 weaklyHypometh 1.0000000 3.2550e-10 weaklyHypometh 1.000000 4.1803e-03 weaklyHypometh 1 0.09761113 weaklyHypometh -0.0560292 0.5563107 insignificant 1.00000 insignificant chrX 152660597 152661597 59289 ABCD1 ENSG00000101986 0.85464 224 8 0.84037 192 8 0.78428 284 8 0.871908 184 8 0.88233 145 5 0.77255 367 8 0.823021 199 8 0.84906 201 8 0.84664 237 8 0.82526 229 8 0.86150 249 8 0.916518 59 5 0.8360113 264 8 0.853208 98 8 0.843702 187 8 0.7780000 65 5 0.722222 14 0 0.832091 261 8 0.770005 348 8 0.81798 329 8 0.790123 70 5 0.809996 102 6 0.84061 97 8 0.88274 152 8 0.882751 119 8 0.892562 286 8 0.80873 194 8 0.79374 154 8 0.69399 319 8 0.860432 231 8 0.82873 423 8 0.783388 434 8 0.597898 153 8 0.51254 201 8 0.41879 187 6 0.49991 90 7 0.661045 133 8 0.68924 337 8 0.83792 338 8 0.823854 219 8 0.758619 227 8 0.83146 261 8 0.8027942 190 6 0.85507 0.868576 0.78168 0.877249 0.887752 0.787639 0.848588 0.87339 0.827012 0.88724 0.88668 0.901056 0.821613 0.852022 0.874333 0.7982511 0.779583 0.841837 0.874883 0.83838 0.831736 0.810347 0.877945 0.89533 0.890532 0.90367 0.803156 0.90156 0.79097 0.865484 0.82921 0.847062 0.5414946 0.51455 0.38306 0.49764 0.623807 0.70843 0.83475 0.833056 0.776374 0.85920 0.8054148 3 0.85010 0.84967 0.00249037 8 0.81650 0.78962 2.6878e-02 3.5244e-01 0.84223362 insignificant 1.00000000 1.00000 insignificant 0.812907 0.7151283 insignificant 1 1 insignificant 0.00674963 0.726196 insignificant 1 insignificant 0.85040 0.56131 0.28183494 8 0.83312 0.59155 0.24156883 4.8050e-26 1.0000e+00 hypermethylated 1.1220e-23 1.000000 hypermethylated 4.9978e-10 1.0000000 hypermethylated 1.1670e-07 1 hypermethylated 0.2658281 0.00116851 weaklyHypermeth 0.099539 weaklyHypermeth 0.85040 0.78704 0.0263637 8 0.83312 0.80498 0.02814455 0.0046147 9.3979e-01 weaklyHypermeth 0.43101 1.0000e+00 insignificant 0.031432 9.3905e-01 weaklyHypermeth 1 1.0000e+00 insignificant 0.01813664 0.3296325 insignificant 1 insignificant 0.85049 0.56131 0.2782203 8 0.83077 0.59155 0.2392214 2.9344e-15 1.0000e+00 hypermethylated 4.5679e-13 1.000000 hypermethylated 2.2611e-09 1.000000 hypermethylated 3.5198e-07 1 hypermethylated 0.2590784 0.00096032 hypermethylated 0.077221 hypermethylated 0.85049 0.78704 0.0236446 8 0.83077 0.80498 0.02579716 6.6639e-02 8.9850e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.093508 0.9603306 insignificant 1 1 insignificant 0.0113870 0.606524 insignificant 1 insignificant 0.56131 0.78704 -0.2537345 8 0.59155 0.80498 -0.21342427 1.0000e+00 5.7415e-07 hypomethylated 1.0000000 3.3516e-05 hypomethylated 1.000000 1.6135e-05 hypomethylated 1 0.00251167 hypomethylated -0.2476914 0.0013939 weaklyHypometh 0.25088 insignificant chrX 152861297 152862297 59294 NAA10 ENSG00000102030 0.93237 224 10 0.77333 44 7 0.92684 245 10 0.899288 131 6 0.85478 144 10 0.95013 159 10 0.933010 222 10 0.92812 178 10 0.91417 279 10 0.94871 181 10 0.92999 235 10 0.972727 119 7 0.9490149 300 10 0.933333 75 6 0.917055 139 10 0.6692927 74 7 0.938095 84 7 0.948674 162 6 0.917437 190 10 0.93163 192 10 0.909091 29 0 0.828571 54 5 0.95901 154 10 0.82424 58 6 0.896667 51 6 0.936862 151 10 0.77237 69 9 0.81032 92 9 0.92434 119 10 0.888933 110 10 0.86983 124 10 0.939998 273 10 0.965909 56 3 0.85739 111 10 1.00000 7 0 1.00000 55 8 0.872222 74 7 0.92841 161 10 0.77935 317 10 0.965000 117 6 0.984298 260 6 0.93774 300 10 0.9858333 114 6 0.91763 0.773922 0.93210 0.902170 0.800418 0.940577 0.919900 0.93856 0.899441 0.95252 0.91138 0.971658 0.944390 0.939142 0.900681 0.7965697 0.898880 0.939321 0.908960 0.92080 1.000000 0.894510 0.955052 0.92549 0.877843 0.93772 0.846557 0.89986 0.92971 0.863579 0.86494 0.944639 0.9731283 0.83306 0.95972 1.00000 0.957843 0.92527 0.92774 0.972059 0.981010 0.92667 0.9806373 1 0.91916 0.91667 0.00537025 10 0.93635 0.79349 1.4286e-01 4.8582e-01 0.82955056 insignificant 1.00000000 1.00000 insignificant 0.719617 0.7835797 insignificant 1 1 insignificant 0.02838040 0.232190 insignificant 1 insignificant 0.91916 0.90948 0.01059049 8 0.93635 0.84843 0.08791968 6.3513e-01 5.5263e-01 insignificant 1.0000e+00 1.000000 insignificant 9.9750e-01 0.0070831 inconclusive 1.0000e+00 1 insignificant -0.0289209 0.35785241 insignificant 1.000000 insignificant 0.91916 0.94495 -0.0312330 10 0.93635 0.79556 0.14079072 0.9998988 4.7646e-02 weaklyHypometh 1.00000 1.0000e+00 insignificant 0.998118 7.3485e-03 weaklyHypometh 1 4.2897e-01 insignificant -0.02204329 0.6191015 insignificant 1 insignificant 0.91667 0.90948 0.0044823 8 0.79349 0.84843 -0.0549420 6.7977e-01 3.2858e-01 insignificant 1.0000e+00 1.000000 insignificant 9.9700e-01 0.011888 inconclusive 1.0000e+00 1 insignificant -0.0573013 0.09196010 insignificant 1.000000 insignificant 0.91667 0.94495 -0.0341948 10 0.79349 0.79556 -0.00207101 9.9572e-01 1.6246e-02 weaklyHypometh 1.0000000 8.4297e-01 insignificant 0.998401 0.0323338 weaklyHypometh 1 1 insignificant -0.0504237 0.281662 insignificant 1 insignificant 0.90948 0.94495 -0.0388506 8 0.84843 0.79556 0.05287103 9.9595e-01 2.7491e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.765026 9.3135e-01 insignificant 1 1.00000000 insignificant 0.0068776 0.8861517 insignificant 1.00000 insignificant chrX 152919897 152920897 59298 TMEM187 ENSG00000177854 0.79889 153 6 0.81125 73 5 0.53472 54 6 0.881746 75 6 0.75000 35 6 0.77553 148 6 0.713757 47 5 0.81806 128 6 0.83217 59 6 0.82424 88 6 0.88224 211 6 0.777778 13 0 0.8328283 115 6 0.850694 35 4 0.797222 38 6 0.3200000 17 1 0.731481 29 2 0.747982 113 6 0.815355 116 6 0.75777 123 6 0.885714 48 6 0.732143 46 3 0.81136 59 6 0.38657 48 3 0.782540 66 6 0.762405 103 6 0.77939 76 6 0.80733 43 3 0.75593 91 6 0.807105 89 6 0.81279 130 6 0.845159 231 6 0.513622 89 6 0.53067 100 6 0.67441 80 4 0.33214 21 2 0.636341 72 6 0.56812 130 6 0.71050 117 6 0.716883 120 6 0.841564 136 6 0.70613 91 6 0.7162698 126 6 0.81752 0.795719 0.55326 0.893954 0.791304 0.757615 0.719779 0.83852 0.825835 0.81447 0.89679 0.808696 0.846802 0.819151 0.806667 0.4385615 0.734300 0.760886 0.795039 0.76699 0.903106 0.742857 0.787848 0.44324 0.802981 0.89107 0.786119 0.78276 0.76287 0.820751 0.83171 0.847495 0.5277592 0.55013 0.66190 0.45586 0.629670 0.58247 0.72166 0.732607 0.860809 0.71910 0.7223087 1 0.79581 0.80971 -0.00675867 6 0.81900 0.75641 6.2591e-02 5.3170e-01 0.65378823 insignificant 1.00000000 1.00000 insignificant 0.485954 0.7723302 insignificant 1 1 insignificant -0.00134947 0.976971 insignificant 1 insignificant 0.79532 0.57114 0.21824548 6 0.78883 0.57465 0.21417972 2.9594e-11 9.9880e-01 hypermethylated 1.5356e-09 1.000000 hypermethylated 2.3104e-05 0.9953035 hypermethylated 1.1502e-03 1 hypermethylated 0.2201360 0.00396895 weaklyHypermeth 0.185350 insignificant 0.79532 0.73559 0.0444933 6 0.78883 0.74156 0.04726993 0.1282574 9.2826e-01 insignificant 1.00000 1.0000e+00 insignificant 0.203764 8.8318e-01 insignificant 1 1.0000e+00 insignificant 0.02441695 0.5369534 insignificant 1 insignificant 0.81031 0.57114 0.2435960 6 0.79914 0.57465 0.2244904 1.6080e-10 9.9996e-01 hypermethylated 9.3865e-09 1.000000 hypermethylated 6.4453e-06 0.999913 hypermethylated 3.3444e-04 1 hypermethylated 0.2214854 0.00422400 weaklyHypermeth 0.197261 insignificant 0.81031 0.73559 0.0664179 6 0.79914 0.74156 0.05758058 8.7810e-02 9.0516e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.168046 0.8876948 insignificant 1 1 insignificant 0.0257664 0.572126 insignificant 1 insignificant 0.57114 0.73559 -0.1795489 6 0.57465 0.74156 -0.16690979 9.9713e-01 9.0482e-05 weaklyHypometh 1.0000000 2.2240e-03 weaklyHypometh 0.997305 1.5228e-03 weaklyHypometh 1 0.05470229 weaklyHypometh -0.1957190 0.0086603 weaklyHypometh 0.34784 insignificant chrX 153073097 153074097 59314 OPN1LW ENSG00000102076 0.91031 355 10 0.84924 172 10 0.74705 137 11 0.920170 340 11 0.91889 57 7 0.93677 235 11 0.776818 129 8 0.89091 149 11 0.73453 139 10 0.91035 65 9 0.87879 319 11 0.650000 15 0 0.9530190 381 11 1.000000 14 2 0.887626 85 9 0.8597222 63 8 0.791375 71 4 0.917146 545 11 0.926781 170 10 0.85235 277 11 0.875541 54 6 0.858375 125 10 0.88697 108 6 0.83902 64 7 0.955714 66 10 0.908248 193 11 0.83810 119 10 0.96558 88 7 0.82315 269 11 0.905418 153 9 0.87350 173 11 0.894686 321 11 0.769490 85 9 0.59019 114 11 0.72650 75 6 0.67590 109 8 0.947500 51 3 0.80332 177 11 0.79982 328 10 0.952480 490 11 0.797081 421 10 0.89669 352 11 0.9379752 391 11 0.87873 0.861197 0.75925 0.903518 0.953771 0.940051 0.808895 0.91600 0.698318 0.93581 0.87864 0.650259 0.944666 0.919786 0.913788 0.9183218 0.805434 0.921532 0.909154 0.87946 0.903713 0.852597 0.859368 0.85287 0.940718 0.91781 0.808117 0.94171 0.79438 0.900019 0.84108 0.893667 0.7678599 0.57595 0.74713 0.70342 0.934197 0.78376 0.80256 0.962427 0.797143 0.89144 0.9305286 1 0.88838 0.88055 0.00636887 11 0.88256 0.88730 -4.7383e-03 5.2022e-01 0.37240660 insignificant 1.00000000 1.00000 insignificant 0.650389 0.2498632 insignificant 1 1 insignificant -0.01976601 0.398303 insignificant 1 insignificant 0.88838 0.72995 0.15241408 10 0.88256 0.73468 0.14788351 1.7872e-11 9.9966e-01 weaklyHypermeth 1.0433e-09 1.000000 weaklyHypermeth 3.8176e-04 0.9541348 weaklyHypermeth 1.0487e-02 1 weaklyHypermeth 0.1134434 0.07287916 insignificant 1.000000 insignificant 0.88838 0.89203 0.0049940 11 0.88256 0.88243 0.00013212 0.7392849 4.5727e-01 insignificant 1.00000 1.0000e+00 insignificant 0.471483 7.7548e-01 insignificant 1 1.0000e+00 insignificant -0.01121595 0.7788253 insignificant 1 insignificant 0.88055 0.72995 0.1437314 10 0.88730 0.73468 0.1526218 4.7768e-09 9.9998e-01 weaklyHypermeth 1.7160e-07 1.000000 weaklyHypermeth 3.8521e-04 0.999120 weaklyHypermeth 1.2849e-02 1 weaklyHypermeth 0.1332094 0.04274963 weaklyHypermeth 0.868003 insignificant 0.88055 0.89203 -0.0031199 11 0.88730 0.88243 0.00487039 6.9806e-01 6.6954e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.312302 0.9448691 insignificant 1 1 insignificant 0.0085501 0.819592 insignificant 1 insignificant 0.72995 0.89203 -0.1490010 10 0.73468 0.88243 -0.14775139 9.9980e-01 1.3155e-04 weaklyHypometh 1.0000000 2.9255e-03 weaklyHypometh 0.883093 2.4288e-02 weaklyHypometh 1 0.36422385 insignificant -0.1246593 0.0687062 insignificant 1.00000 insignificant chrX 153091997 153092997 59316 OPN1LW ENSG00000102076 0.91853 116 5 0.62891 350 5 0.81164 144 5 0.730682 109 4 0.68030 65 5 0.77097 187 5 0.745765 143 5 0.68883 126 5 0.69930 146 5 0.87523 59 4 0.78467 194 5 0.857955 44 4 0.5572441 165 5 0.500000 17 0 0.680991 63 4 0.7452381 103 4 0.725417 71 2 0.808917 180 4 0.691186 200 5 0.74571 463 5 0.638517 86 4 0.716450 32 2 0.77230 87 5 0.84825 66 5 0.827303 29 2 0.697944 214 5 0.81770 130 5 0.81000 61 4 0.77212 190 5 0.606025 152 5 0.57751 226 5 0.830489 324 5 0.577937 127 5 0.78128 72 5 0.80266 229 5 0.74874 44 4 0.860819 72 5 0.79039 271 5 0.80788 242 5 0.688353 357 5 0.765438 199 5 0.77102 254 5 0.5974642 154 5 0.89158 0.624453 0.81532 0.636276 0.746305 0.757718 0.726679 0.66804 0.710436 0.78829 0.80652 0.779976 0.555865 0.615743 0.731663 0.8184377 0.764659 0.742973 0.733515 0.71829 0.573635 0.705319 0.671164 0.84415 0.747873 0.66040 0.799777 0.77266 0.73668 0.570980 0.54696 0.829926 0.5562124 0.71006 0.62692 0.53577 0.815314 0.68531 0.80097 0.660875 0.736823 0.79024 0.6600945 3 0.73098 0.71321 0.01950755 5 0.72733 0.72173 5.5921e-03 1.8360e-01 0.72406205 insignificant 1.00000000 1.00000 insignificant 0.343476 0.4281789 insignificant 1 1 insignificant -0.01051012 0.768429 lowCoverage 1 lowCoverage 0.73098 0.73464 0.00522171 5 0.72733 0.73745 -0.01012280 2.9337e-02 3.1445e-05 weaklyHypermeth 2.6864e-01 0.014685 weaklyHypermeth 1.0902e-01 0.0273331 inconclusive 1.0000e+00 1 insignificant -0.0279318 0.55455105 lowCoverage 1.000000 lowCoverage 0.73098 0.73466 -0.0101272 5 0.72733 0.73518 -0.00785142 0.8394308 2.3669e-01 insignificant 1.00000 1.0000e+00 insignificant 0.683995 7.5466e-01 insignificant 1 1.0000e+00 insignificant 0.00634410 0.8888377 lowCoverage 1 lowCoverage 0.71321 0.73464 -0.0067876 5 0.72173 0.73745 -0.0157149 1.9120e-01 8.9871e-04 weaklyHypometh 1.0000e+00 0.139899 insignificant 4.5223e-01 0.050045 insignificant 1.0000e+00 1 insignificant -0.0174217 0.72363904 lowCoverage 1.000000 lowCoverage 0.71321 0.73466 -0.0245749 5 0.72173 0.73518 -0.01344347 7.1289e-01 1.3808e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.300771 0.5771716 insignificant 1 1 insignificant 0.0168542 0.725132 lowCoverage 1 lowCoverage 0.73464 0.73466 -0.0118317 5 0.73745 0.73518 0.00227138 5.0811e-02 3.8523e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.044419 5.8728e-01 inconclusive 1 1.00000000 insignificant 0.0342759 0.5447937 lowCoverage 1.00000 lowCoverage chrX 153129097 153130097 59321 OPN1MW ENSG00000147380 0.89186 119 5 0.59922 299 5 0.81022 154 5 0.600115 117 5 0.76667 49 4 0.81117 239 5 0.730656 149 5 0.74074 173 5 0.73022 145 5 0.77000 55 3 0.73984 209 5 0.705556 27 2 0.5605650 179 5 0.875000 8 0 0.521658 46 4 0.8700840 53 4 0.726297 69 2 0.726419 189 5 0.663268 205 5 0.74707 436 5 0.645116 47 4 0.518219 32 2 0.64397 107 5 0.66247 89 5 0.862132 27 2 0.703989 233 5 0.81886 147 5 0.89583 57 5 0.74845 204 5 0.586463 121 5 0.55733 227 5 0.842211 297 5 0.614362 135 5 0.68599 83 5 0.76581 201 5 0.78462 35 2 0.823929 66 5 0.71077 238 5 0.79079 249 5 0.652709 425 5 0.752453 152 5 0.67539 245 5 0.6815655 173 5 0.85628 0.568604 0.73960 0.625222 0.839782 0.807855 0.700940 0.74525 0.751121 0.75060 0.70615 0.818783 0.505231 0.858740 0.550330 0.8093888 0.730064 0.711198 0.631607 0.69578 0.754110 0.574721 0.648488 0.80410 0.767566 0.63936 0.731794 0.86330 0.69809 0.539165 0.46531 0.827905 0.5546470 0.60923 0.54695 0.58333 0.749936 0.61510 0.76164 0.647821 0.700092 0.69512 0.6521066 2 0.72432 0.72338 0.00218876 5 0.72591 0.72655 -6.3909e-04 5.7979e-01 0.56078374 insignificant 1.00000000 1.00000 insignificant 0.609076 0.6313920 insignificant 1 1 insignificant 0.02224396 0.609375 lowCoverage 1 lowCoverage 0.72432 0.71504 0.01576916 5 0.72591 0.71434 0.01156794 1.7798e-02 2.9897e-03 weaklyHypermeth 1.8470e-01 0.349049 insignificant 7.8653e-02 0.0150323 inconclusive 7.8151e-01 1 insignificant -0.0015826 0.96782409 lowCoverage 1.000000 lowCoverage 0.72432 0.71141 0.0108773 5 0.72591 0.71375 0.01216121 0.5485190 6.4342e-01 insignificant 1.00000 1.0000e+00 insignificant 0.392708 7.6904e-01 insignificant 1 1.0000e+00 insignificant 0.01874974 0.5980253 lowCoverage 1 lowCoverage 0.72338 0.71504 0.0237972 5 0.72655 0.71434 0.0122070 1.5629e-01 8.6346e-02 insignificant 1.0000e+00 1.000000 insignificant 3.8237e-01 0.149651 insignificant 1.0000e+00 1 insignificant -0.0238265 0.62504453 lowCoverage 1.000000 lowCoverage 0.72338 0.71141 0.0088251 5 0.72655 0.71375 0.01280030 5.5051e-01 7.3379e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.411118 0.8342784 insignificant 1 1 insignificant -0.0034942 0.938836 lowCoverage 1 lowCoverage 0.71504 0.71141 -0.0054799 5 0.71434 0.71375 0.00059327 5.5537e-02 3.5855e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.054751 4.8409e-01 insignificant 1 1.00000000 insignificant 0.0203323 0.6276562 lowCoverage 1.00000 lowCoverage chrX 153147197 153148197 59324 OPN1MW2 ENSG00000166160 0.91261 343 11 0.87902 178 10 0.82539 119 9 0.935847 293 10 0.91534 62 9 0.89457 239 9 0.921212 111 11 0.91549 155 11 0.86862 149 10 0.83815 73 9 0.88526 316 11 0.916667 19 0 0.9213997 381 11 0.900000 20 3 0.892915 99 10 0.8433333 56 3 0.813203 91 10 0.897881 472 10 0.950558 158 10 0.90924 393 11 0.913961 65 9 0.869700 129 10 0.72010 125 6 0.86188 75 7 0.893690 124 10 0.838457 190 11 0.82393 151 11 0.85440 92 7 0.82897 270 11 0.916822 141 11 0.83180 155 11 0.842525 302 11 0.807359 89 10 0.67763 118 11 0.72727 122 9 0.72140 98 8 0.906449 79 9 0.78838 208 11 0.76085 319 11 0.944852 533 11 0.871510 398 11 0.87431 371 9 0.9490441 335 11 0.88580 0.865220 0.82418 0.920384 0.909223 0.865821 0.952241 0.90583 0.839066 0.88127 0.87894 0.940649 0.907649 0.908230 0.911441 0.9145658 0.797769 0.913621 0.944162 0.88076 0.906588 0.826575 0.789492 0.91435 0.886970 0.83456 0.814526 0.93317 0.81593 0.939815 0.84256 0.849052 0.8223123 0.71980 0.75609 0.82763 0.877936 0.76111 0.80463 0.916185 0.887013 0.88029 0.9246675 4 0.89053 0.85267 0.04065324 11 0.89816 0.85262 4.5535e-02 2.3209e-05 0.99998191 weaklyHypermeth 0.00541936 1.00000 weaklyHypermeth 0.011397 0.9910913 weaklyHypermeth 1 1 insignificant 0.04215002 0.024172 weaklyHypermeth 1 insignificant 0.89053 0.74790 0.14158074 10 0.89816 0.74247 0.15568269 4.6396e-14 9.9522e-01 weaklyHypermeth 3.6112e-12 1.000000 weaklyHypermeth 7.7717e-04 0.9885828 weaklyHypermeth 1.7283e-02 1 weaklyHypermeth 0.1204200 0.01387672 weaklyHypermeth 0.405027 insignificant 0.89053 0.89417 0.0059704 11 0.89816 0.88610 0.01205729 0.3837468 6.0008e-01 insignificant 1.00000 1.0000e+00 insignificant 0.249376 9.0546e-01 insignificant 1 1.0000e+00 insignificant 0.01172220 0.7535249 insignificant 1 insignificant 0.85267 0.74790 0.1017042 10 0.85262 0.74247 0.1101479 9.7863e-06 6.1819e-01 weaklyHypermeth 2.0774e-04 1.000000 weaklyHypermeth 4.3360e-02 0.897349 weaklyHypermeth 5.0623e-01 1 insignificant 0.0782699 0.06808167 insignificant 1.000000 insignificant 0.85267 0.89417 -0.0347660 11 0.85262 0.88610 -0.03347754 9.8447e-01 2.9172e-02 weaklyHypometh 1.0000000 1.0000e+00 insignificant 0.883437 0.6583019 insignificant 1 1 insignificant -0.0304278 0.447279 insignificant 1 insignificant 0.74790 0.89417 -0.1348653 10 0.74247 0.88610 -0.14362540 9.9937e-01 4.6345e-04 weaklyHypometh 1.0000000 8.6573e-03 weaklyHypometh 0.948711 8.5035e-02 insignificant 1 0.94550300 insignificant -0.1086978 0.0488177 weaklyHypometh 0.82258 insignificant chrX 153157697 153158697 59325 OPN1MW2 ENSG00000166160 0.69305 309 9 0.55369 155 9 0.54428 149 9 0.679544 166 9 0.54422 82 8 0.60890 296 9 0.629209 130 9 0.64338 162 9 0.68692 96 8 0.57906 157 8 0.76378 223 9 0.576587 80 7 0.7794303 124 9 0.719048 18 3 0.737634 102 7 0.7590476 98 8 0.613605 101 7 0.689493 252 9 0.635865 196 9 0.66346 294 9 0.605224 71 6 0.742327 99 9 0.59911 147 8 0.51008 86 6 0.536772 47 3 0.688698 158 9 0.74798 70 7 0.85202 41 5 0.62156 112 8 0.586622 200 8 0.64515 188 9 0.721183 361 9 0.621667 130 9 0.56210 130 9 0.44574 217 9 0.69148 100 7 0.389286 94 9 0.63826 249 9 0.63885 251 9 0.720791 286 9 0.721460 178 9 0.78849 244 8 0.6796177 233 9 0.75550 0.755399 0.67605 0.768163 0.653254 0.724823 0.742348 0.75279 0.663900 0.65581 0.77022 0.668104 0.750444 0.721068 0.779846 0.7804291 0.674133 0.736269 0.783925 0.71880 0.658282 0.787445 0.733789 0.70658 0.613161 0.70256 0.845340 0.84552 0.70278 0.645150 0.71321 0.715216 0.7076435 0.63454 0.52917 0.76785 0.555250 0.64385 0.75712 0.773811 0.764270 0.79815 0.7952799 4 0.68683 0.69455 0.00876007 9 0.65410 0.58661 6.7483e-02 3.7418e-01 0.83448240 insignificant 1.00000000 1.00000 insignificant 0.347310 0.6701780 insignificant 1 1 insignificant 0.00028303 0.993245 insignificant 1 insignificant 0.68707 0.58913 0.11471088 9 0.66437 0.58644 0.07793278 2.3148e-08 9.9912e-01 weaklyHypermeth 6.0055e-07 1.000000 weaklyHypermeth 1.4309e-03 0.9998084 weaklyHypermeth 3.0373e-02 1 weaklyHypermeth 0.0969196 0.10361296 insignificant 1.000000 insignificant 0.68668 0.74245 -0.0540119 9 0.64040 0.76650 -0.12610567 0.9982839 5.8231e-03 weaklyHypometh 1.00000 4.5323e-01 insignificant 0.999754 1.5568e-02 weaklyHypometh 1 8.0781e-01 insignificant -0.05483207 0.1042464 insignificant 1 insignificant 0.69499 0.58913 0.1054317 9 0.62572 0.58644 0.0392838 2.7312e-04 9.9486e-01 weaklyHypermeth 4.5553e-03 1.000000 weaklyHypermeth 3.5568e-02 0.998004 weaklyHypermeth 4.2591e-01 1 insignificant 0.0966366 0.11930226 insignificant 1.000000 insignificant 0.69543 0.74245 -0.0607081 9 0.67041 0.76650 -0.09608677 9.9727e-01 1.4301e-02 weaklyHypometh 1.0000000 8.4297e-01 insignificant 0.997558 0.0510740 insignificant 1 1 insignificant -0.0551151 0.168582 insignificant 1 insignificant 0.58868 0.74245 -0.1669574 9 0.55690 0.76650 -0.20960508 1.0000e+00 1.1329e-06 weaklyHypometh 1.0000000 5.2904e-05 weaklyHypometh 1.000000 6.9791e-04 weaklyHypometh 1 0.03259225 weaklyHypometh -0.1517517 0.0250719 weaklyHypometh 0.59689 insignificant chrX 153166897 153167897 59326 OPN1MW2 ENSG00000166160 0.82603 586 6 0.66115 198 6 0.83651 146 5 0.676791 212 6 0.84092 144 6 0.84982 629 6 0.766344 442 6 0.86352 243 6 0.89209 68 6 0.94444 83 5 0.86687 299 6 0.910000 55 5 0.6575697 177 6 0.721429 55 4 0.750828 178 6 0.8154762 17 2 0.777174 62 2 0.809933 466 6 0.722773 431 6 0.80779 580 6 0.892728 84 5 0.472222 28 2 0.80739 110 6 0.92659 111 6 0.875758 20 2 0.825345 190 6 0.79916 264 6 0.72671 120 6 0.82094 440 6 0.688160 266 6 0.71726 315 6 0.908113 452 6 0.752542 107 6 0.81679 172 6 0.74702 88 6 0.82784 31 3 0.864991 246 6 0.74908 309 6 0.79958 1010 6 0.742249 292 6 0.773123 209 6 0.85202 157 5 0.7446583 312 6 0.77324 0.677656 0.77808 0.695318 0.820536 0.846904 0.746095 0.82981 0.875098 0.85897 0.84809 0.852772 0.564824 0.720637 0.760819 0.7742203 0.792914 0.766130 0.673679 0.75844 0.844597 0.585334 0.768750 0.86545 0.762207 0.75307 0.732690 0.84702 0.75967 0.573870 0.62146 0.884170 0.6939058 0.62586 0.65757 0.62541 0.720894 0.60679 0.73787 0.691631 0.683358 0.82880 0.7333345 2 0.81858 0.81667 -0.00325046 6 0.82422 0.69034 1.3388e-01 7.8887e-01 0.34782017 insignificant 1.00000000 1.00000 insignificant 0.733184 0.2002230 insignificant 1 1 insignificant 0.01150886 0.780509 insignificant 1 insignificant 0.81858 0.78174 0.03138848 6 0.82422 0.82568 -0.00145857 2.2330e-03 2.7075e-04 weaklyHypermeth 2.6738e-02 0.042146 weaklyHypermeth 4.5647e-02 0.0487179 weaklyHypermeth 5.1330e-01 1 insignificant 0.0068289 0.80760814 insignificant 1.000000 insignificant 0.81854 0.79444 0.0126351 6 0.79493 0.78265 0.01227453 0.2118117 5.7851e-01 insignificant 1.00000 1.0000e+00 insignificant 0.197917 6.0399e-01 insignificant 1 1.0000e+00 insignificant 0.01754727 0.5338653 insignificant 1 insignificant 0.81667 0.78174 0.0350271 6 0.69034 0.82568 -0.1353374 2.0035e-01 6.6690e-02 insignificant 1.0000e+00 1.000000 insignificant 4.0639e-01 0.128419 insignificant 1.0000e+00 1 insignificant -0.0046799 0.91203474 insignificant 1.000000 insignificant 0.81701 0.79444 0.0205988 6 0.80540 0.78265 0.02274922 3.3787e-01 7.7375e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.205982 0.8415133 insignificant 1 1 insignificant 0.0060384 0.886489 insignificant 1 insignificant 0.78151 0.79444 -0.0123480 6 0.79663 0.78265 0.01397620 7.5245e-06 2.5717e-01 inconclusive 0.0035140 1.0000e+00 inconclusive 0.011445 3.4942e-01 inconclusive 1 1.00000000 insignificant 0.0107183 0.7193012 insignificant 1.00000 insignificant chrX 153234097 153235097 59331 TKTL1 ENSG00000007350 0.90999 252 8 0.94762 72 5 0.80992 90 5 0.956474 120 5 1.00000 22 3 0.97059 141 5 0.840000 42 5 0.91256 84 5 0.93278 41 5 0.74000 50 3 0.89887 156 5 NA 0 0 0.9321515 95 5 0.973333 47 3 0.966667 29 5 1.0000000 12 0 NA 0 0 0.899942 322 8 0.944419 205 5 0.89600 206 5 0.934722 43 3 0.966667 59 3 0.98667 58 5 0.60000 7 0 0.922049 296 5 0.965122 164 5 0.80278 49 4 0.82000 16 2 0.90778 207 5 0.958868 87 5 0.95851 200 5 0.966399 170 5 0.940000 40 5 0.65328 226 5 1.00000 31 3 0.80294 65 5 0.869318 60 5 0.87332 273 8 0.88841 197 5 0.936842 101 8 0.848526 274 8 0.92045 456 8 0.9326923 114 8 0.95097 0.910524 0.69067 0.951649 1.000000 0.973059 0.900000 0.93562 0.887900 0.95251 0.93686 NA 0.944761 0.952511 0.940639 1.0000000 NA 0.877881 0.954263 0.96528 0.930251 0.945205 0.976256 0.67808 0.938477 0.98263 0.960426 0.71370 0.90116 0.971461 0.93908 0.970453 0.9643836 0.64430 1.00000 0.91620 0.844178 0.92872 0.92889 0.962509 0.937898 0.89784 0.9863014 2 0.92389 0.93126 -0.00873191 5 0.90892 0.95097 -4.2050e-02 9.8696e-01 0.02197826 weaklyHypometh 1.00000000 1.00000 insignificant 0.968711 0.1849487 insignificant 1 1 insignificant 0.01927674 0.596032 lowCoverage 1 lowCoverage 0.92389 0.81871 0.10126987 5 0.90892 0.81471 0.09420340 1.5030e-04 9.9867e-01 weaklyHypermeth 2.1270e-03 1.000000 weaklyHypermeth 1.5223e-01 0.8991087 insignificant 1.0000e+00 1 insignificant 0.0619305 0.27412113 lowCoverage 1.000000 lowCoverage 0.92389 0.90105 0.0085684 5 0.90892 0.89209 0.01683105 0.1690309 6.6549e-01 insignificant 1.00000 1.0000e+00 insignificant 0.233911 4.3355e-01 insignificant 1 1.0000e+00 insignificant 0.01302260 0.5790587 lowCoverage 1 lowCoverage 0.93126 0.81871 0.1124338 5 0.95097 0.81471 0.1362538 1.2821e-02 1.0000e+00 weaklyHypermeth 1.3608e-01 1.000000 insignificant 1.9565e-01 0.984485 insignificant 1.0000e+00 1 insignificant 0.0426537 0.48416159 lowCoverage 1.000000 lowCoverage 0.93126 0.90105 0.0183501 5 0.95097 0.89209 0.05888146 4.7450e-04 9.9565e-01 weaklyHypermeth 0.1107968 1.0000e+00 insignificant 0.097826 0.9225350 insignificant 1 1 insignificant -0.0062541 0.864520 lowCoverage 1 lowCoverage 0.81871 0.90105 -0.0933674 5 0.81471 0.89209 -0.07737235 9.3791e-01 3.6056e-02 weaklyHypometh 1.0000000 3.5826e-01 insignificant 0.950594 4.9757e-01 insignificant 1 1.00000000 insignificant -0.0489079 0.3806705 insignificant 1.00000 insignificant chrX 153240297 153241297 59332 TKTL1 ENSG00000007350 0.96073 474 13 0.88820 176 12 0.87036 593 12 0.964232 260 13 0.85024 296 12 0.92053 401 13 0.881377 389 10 0.86413 449 12 0.87568 440 13 0.90104 512 13 0.86763 530 13 0.912008 233 9 0.9192034 454 13 0.978056 187 11 0.917447 311 11 0.8362210 187 8 0.812004 56 6 0.950100 227 12 0.924419 400 13 0.88453 592 13 0.825089 159 11 0.918013 85 8 0.93528 165 11 0.76398 206 12 0.946483 123 10 0.924734 448 12 0.81034 564 13 0.92660 286 10 0.91919 427 13 0.915006 247 12 0.89401 412 12 0.924659 604 13 0.792920 175 12 0.65104 332 12 0.71042 66 3 0.94444 63 4 0.716455 214 12 0.83433 438 13 0.88471 651 13 0.981571 267 13 0.847184 321 12 0.89317 354 11 0.9211235 211 12 0.95801 0.919010 0.89353 0.963799 0.913725 0.948848 0.925837 0.91044 0.928453 0.93345 0.91441 0.908846 0.952413 0.960455 0.947020 0.8635821 0.912311 0.935138 0.955288 0.89777 0.818582 0.897840 0.955758 0.86906 0.935789 0.94115 0.909202 0.92054 0.91252 0.942404 0.90998 0.935885 0.8282663 0.70212 0.87818 0.91222 0.749894 0.91334 0.92402 0.993234 0.922903 0.94064 0.9206772 6 0.92631 0.91331 0.00697009 13 0.91515 0.88062 3.4529e-02 3.0077e-01 0.97034553 insignificant 1.00000000 1.00000 insignificant 0.503258 0.9724431 insignificant 1 1 insignificant 0.00695757 0.726143 insignificant 1 insignificant 0.92631 0.75991 0.14581565 13 0.91515 0.78297 0.13217581 7.9321e-19 1.0000e+00 weaklyHypermeth 1.2348e-16 1.000000 weaklyHypermeth 4.2154e-05 0.9999534 weaklyHypermeth 1.5143e-03 1 weaklyHypermeth 0.1239728 0.03360452 weaklyHypermeth 0.747301 insignificant 0.92623 0.93404 -0.0062009 13 0.89557 0.90519 -0.00962249 0.4918557 4.4786e-01 insignificant 1.00000 1.0000e+00 insignificant 0.742672 5.3224e-01 insignificant 1 1.0000e+00 insignificant -0.00664475 0.7955111 insignificant 1 insignificant 0.91331 0.75991 0.1484119 13 0.88062 0.78297 0.0976472 1.0967e-12 1.0000e+00 weaklyHypermeth 1.0243e-10 1.000000 weaklyHypermeth 6.6327e-04 0.999761 weaklyHypermeth 1.9359e-02 1 weaklyHypermeth 0.1170152 0.04113908 weaklyHypermeth 0.868003 insignificant 0.91384 0.93404 -0.0109187 13 0.89922 0.90519 -0.00596540 7.3745e-01 2.1959e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.738281 0.1207924 insignificant 1 1 insignificant -0.0136023 0.639398 insignificant 1 insignificant 0.75956 0.93404 -0.1501699 13 0.75853 0.90519 -0.14665938 9.9999e-01 1.4235e-06 weaklyHypometh 1.0000000 6.0433e-05 weaklyHypometh 0.999341 3.4317e-03 weaklyHypometh 1 0.08434680 weaklyHypometh -0.1306176 0.0293759 weaklyHypometh 0.60439 insignificant chrX 153267197 153268197 59333 EMD ENSG00000102119 0.75187 473 10 0.75482 100 10 0.67349 246 11 0.847666 254 10 0.65980 188 10 0.83322 320 10 0.844207 301 10 0.75593 200 9 0.73317 183 10 0.93215 266 10 0.87747 284 9 0.790141 103 7 0.8150140 196 9 0.713861 96 9 0.689334 110 9 0.7733333 42 4 0.814980 39 4 0.771399 418 10 0.732967 264 9 0.87748 359 10 0.738636 62 4 0.880893 137 9 0.81181 107 9 0.75634 108 8 0.749655 342 10 0.636983 250 10 0.87744 172 10 0.67227 136 9 0.89919 249 9 0.939674 144 10 0.82071 239 10 0.790475 417 10 0.551358 105 10 0.48110 221 9 0.74661 263 9 0.86148 112 7 0.396776 108 9 0.76655 361 10 0.89006 498 10 0.855744 217 10 0.876903 405 9 0.80371 507 9 0.8461549 207 10 0.89400 0.727984 0.81095 0.877319 0.866907 0.894910 0.864175 0.85455 0.896274 0.89910 0.89168 0.916805 0.869948 0.870657 0.847932 0.8105451 0.828232 0.853042 0.883233 0.84250 0.697395 0.824812 0.896425 0.88933 0.861166 0.80723 0.860431 0.86872 0.84446 0.929551 0.79811 0.830650 0.5120800 0.43863 0.90230 0.84359 0.683283 0.67132 0.90247 0.860731 0.851657 0.89078 0.8612509 7 0.85251 0.82627 0.02809736 9 0.70120 0.69435 6.8533e-03 3.0005e-02 0.51321019 weaklyHypermeth 1.00000000 1.00000 insignificant 0.625232 0.4821630 insignificant 1 1 insignificant -0.01572397 0.620272 insignificant 1 insignificant 0.85228 0.70326 0.14868741 9 0.68548 0.51061 0.17486634 9.0879e-11 9.9938e-01 weaklyHypermeth 4.2441e-09 1.000000 weaklyHypermeth 2.8233e-03 0.9998473 weaklyHypermeth 5.4938e-02 1 weaklyHypermeth 0.1481367 0.10619734 insignificant 1.000000 insignificant 0.85721 0.86532 -0.0114676 9 0.81252 0.82897 -0.01644795 0.5648288 1.6105e-01 insignificant 1.00000 1.0000e+00 insignificant 0.846431 4.2898e-01 insignificant 1 1.0000e+00 insignificant -0.07239841 0.0050896 weaklyHypometh 1 insignificant 0.82697 0.70266 0.1223802 9 0.71435 0.48508 0.2292698 2.8683e-04 9.9972e-01 weaklyHypermeth 4.6189e-03 1.000000 weaklyHypermeth 2.0840e-02 0.999976 weaklyHypermeth 2.8625e-01 1 insignificant 0.1638606 0.08280692 insignificant 1.000000 insignificant 0.82904 0.86532 -0.0414368 9 0.73086 0.82897 -0.09810815 9.9746e-01 4.2867e-02 weaklyHypometh 1.0000000 1.0000e+00 insignificant 0.948973 0.2906563 insignificant 1 1 insignificant -0.0566744 0.082901 insignificant 1 insignificant 0.70732 0.86532 -0.1626402 9 0.65222 0.82897 -0.17675219 9.9988e-01 1.7319e-04 weaklyHypometh 1.0000000 3.6763e-03 weaklyHypometh 0.999947 2.1376e-02 weaklyHypometh 1 0.34422556 insignificant -0.2205351 0.0314468 weaklyHypometh 0.61190 insignificant chrX 153373640 153374640 59335 SLC10A3 ENSG00000126903 0.80828 264 7 0.63980 123 7 0.63762 102 7 0.883627 146 7 0.73032 56 5 0.68565 245 7 0.671251 73 7 0.67924 113 6 0.64231 63 5 0.64982 82 7 0.72050 289 7 0.632206 71 6 0.7738450 123 6 0.693750 36 4 0.687855 105 7 0.7962894 58 5 0.421569 44 4 0.760116 161 7 0.705662 117 5 0.70935 214 7 0.799950 59 6 0.867100 55 4 0.73102 105 7 0.61643 59 3 0.807179 73 7 0.621380 143 7 0.72113 91 5 0.71964 57 3 0.76837 127 6 0.700289 138 7 0.72137 174 7 0.710871 316 7 0.669792 115 6 0.69461 99 7 0.77000 133 6 0.78803 43 4 0.699134 49 3 0.67617 139 7 0.79911 220 7 0.820956 213 7 0.766875 217 7 0.67609 201 7 0.8431295 250 7 0.79159 0.666413 0.77320 0.865720 0.711509 0.779220 0.710294 0.71826 0.664271 0.71724 0.74958 0.655662 0.771101 0.740307 0.696268 0.8010888 0.560151 0.803606 0.782051 0.79387 0.796726 0.840848 0.727249 0.71282 0.774156 0.76094 0.707137 0.75080 0.72643 0.682695 0.70905 0.782220 0.7616793 0.66481 0.79690 0.72663 0.629974 0.62320 0.81742 0.838017 0.774726 0.68398 0.8130329 3 0.75332 0.74159 0.00181489 7 0.66226 0.73330 -7.1041e-02 5.5733e-01 0.30231252 insignificant 1.00000000 1.00000 insignificant 0.906908 0.2770518 insignificant 1 1 insignificant -0.03560830 0.235031 insignificant 1 insignificant 0.75333 0.69031 0.05797767 7 0.64471 0.72133 -0.07661558 2.7586e-02 8.2139e-01 weaklyHypermeth 2.6291e-01 1.000000 insignificant 5.4517e-01 0.5482589 insignificant 1.0000e+00 1 insignificant -0.0198385 0.50484528 insignificant 1.000000 insignificant 0.75374 0.80745 -0.0349111 7 0.68089 0.80644 -0.12555045 0.9648082 1.3160e-02 weaklyHypometh 1.00000 6.9174e-01 insignificant 0.999226 7.3210e-03 weaklyHypometh 1 4.2897e-01 insignificant -0.08478056 0.0430092 weaklyHypometh 1 insignificant 0.74156 0.69031 0.0536800 7 0.71329 0.72133 -0.0080333 7.5672e-02 9.4796e-01 insignificant 6.9291e-01 1.000000 insignificant 4.2944e-01 0.931527 insignificant 1.0000e+00 1 insignificant 0.0157698 0.59772195 insignificant 1.000000 insignificant 0.74135 0.80745 -0.0366909 7 0.68328 0.80644 -0.12315599 9.2981e-01 8.0924e-03 weaklyHypometh 1.0000000 7.5583e-01 insignificant 0.902476 0.0864973 insignificant 1 1 insignificant -0.0491723 0.205658 insignificant 1 insignificant 0.68924 0.80745 -0.0935424 7 0.65166 0.80644 -0.15478098 9.9988e-01 5.6164e-03 weaklyHypometh 1.0000000 7.6728e-02 weaklyHypometh 0.986564 6.3834e-02 insignificant 1 0.72708354 insignificant -0.0649420 0.1083567 insignificant 1.00000 insignificant chrX 153968140 153969140 59356 BRCC3 ENSG00000185515 0.94333 85 5 0.91317 82 5 0.89772 110 5 1.000000 19 2 0.93333 26 3 0.86222 50 5 0.936569 82 5 0.96276 117 5 0.92541 76 5 0.97000 96 5 0.86095 147 5 0.950000 10 0 0.9531115 141 5 NA 0 0 0.953247 46 5 0.9664336 30 2 0.865934 48 5 1.000000 9 0 0.964093 108 5 0.91411 138 5 0.933333 28 3 0.500000 8 0 0.76558 44 4 0.91667 52 5 1.000000 4 0 0.963385 162 5 0.88571 36 4 0.98000 39 5 0.89333 101 4 0.983333 106 5 0.92354 96 5 0.938470 116 5 0.955556 45 5 0.91607 99 5 0.95833 121 3 0.92500 19 2 0.822857 21 2 0.94017 112 5 0.95166 124 5 0.984615 54 5 0.941414 49 5 0.98462 57 5 1.0000000 5 0 0.94333 0.913166 0.89772 1.000000 0.933333 0.862222 0.936569 0.96276 0.925415 0.97000 0.86095 0.950000 0.953111 NA 0.953247 0.9664336 0.865934 0.957301 0.964093 0.91411 0.933333 0.500000 0.765584 0.91667 0.964076 0.96338 0.885714 0.98000 0.89333 0.983333 0.92354 0.938470 0.9555556 0.91607 0.90209 0.92500 0.822857 0.94017 0.95166 0.984615 0.941414 0.98462 1.0000000 0 0.93028 0.93813 -0.00295157 5 0.92663 0.92658 5.3976e-05 6.8711e-01 0.25791064 insignificant 1.00000000 1.00000 insignificant 0.504621 0.3077962 insignificant 1 1 insignificant 0.04510884 0.290361 lowCoverage 1 lowCoverage 0.93028 0.93525 0.00092865 5 0.92663 0.91624 0.01039030 5.4744e-01 4.3703e-01 insignificant 1.0000e+00 1.000000 insignificant 4.5857e-01 0.5198077 insignificant 1.0000e+00 1 insignificant 0.0157253 0.50846127 lowCoverage 1.000000 lowCoverage 0.93028 0.96194 -0.0339874 5 0.92663 0.96227 -0.03563613 0.9790292 3.5326e-02 weaklyHypometh 1.00000 1.0000e+00 insignificant 0.941074 3.2619e-02 weaklyHypometh 1 1.0000e+00 insignificant -0.03707143 0.0279658 lowCoverage 1 lowCoverage 0.93813 0.93525 0.0021806 5 0.92658 0.91624 0.0103363 5.0287e-01 7.2778e-01 insignificant 1.0000e+00 1.000000 insignificant 5.3740e-01 0.790299 insignificant 1.0000e+00 1 insignificant -0.0293835 0.52053967 lowCoverage 1.000000 lowCoverage 0.93813 0.96194 -0.0270205 5 0.92658 0.96227 -0.03569010 6.6529e-01 2.5210e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.719281 0.0976486 insignificant 1 1 insignificant -0.0821803 0.068273 lowCoverage 1 lowCoverage 0.93525 0.96194 -0.0341254 5 0.91624 0.96227 -0.04602643 7.3382e-01 6.0764e-02 insignificant 1.0000000 5.5641e-01 insignificant 0.855192 2.4958e-02 weaklyHypometh 1 0.36422385 insignificant -0.0527968 0.0552264 lowCoverage 0.88933 lowCoverage chrX 154054940 154055940 59358 MTCP1 ENSG00000214827 0.88568 116 7 0.76828 112 7 0.57703 66 7 0.758725 105 7 0.97143 26 2 0.85242 83 3 0.537500 52 7 0.85157 118 7 0.81136 24 2 0.95604 49 7 0.82638 265 7 0.583333 7 0 0.8066457 71 7 0.797619 30 2 0.936508 52 2 0.6285714 29 1 0.333333 3 0 0.932805 74 2 0.916948 108 7 0.81025 104 7 0.912698 18 1 1.000000 3 0 0.89201 71 7 0.94318 39 2 0.976190 12 1 0.879434 260 7 0.79946 49 5 0.93878 19 1 0.62864 90 2 0.922902 161 7 0.79435 227 7 0.820035 142 7 0.822619 59 2 0.50579 98 6 0.46128 58 2 1.00000 5 0 0.843537 50 2 0.66803 266 7 0.87261 142 7 0.923881 154 7 0.819372 91 7 0.70888 55 2 0.8435065 100 7 0.81973 0.763840 0.64436 0.842726 0.939623 0.791898 0.684906 0.81888 0.808902 0.90711 0.81889 0.687849 0.729767 0.817610 0.865828 0.7056604 0.534946 0.837717 0.850437 0.83234 0.815514 0.959681 0.822206 0.86278 0.949686 0.85767 0.846211 0.87062 0.73882 0.884606 0.81758 0.793192 0.7477987 0.63176 0.48421 0.85533 0.807727 0.78320 0.86270 0.903554 0.823328 0.75218 0.8412521 0 0.81325 0.86343 -0.03712231 7 0.77205 0.86361 -9.1558e-02 9.9558e-01 0.04654580 weaklyHypometh 1.00000000 1.00000 insignificant 0.978292 0.0861498 insignificant 1 1 insignificant -0.09851887 0.046132 lowCoverage 1 lowCoverage 0.81409 0.67164 0.12585245 7 0.81092 0.62619 0.18473262 2.5639e-06 9.9977e-01 weaklyHypermeth 4.6051e-05 1.000000 weaklyHypermeth 2.5560e-02 0.9678228 weaklyHypermeth 3.0921e-01 1 insignificant 0.0602462 0.53888584 lowCoverage 1.000000 lowCoverage 0.81409 0.87085 -0.0556203 7 0.81092 0.87167 -0.06075152 0.9903056 6.7765e-02 insignificant 1.00000 1.0000e+00 insignificant 0.687307 4.6978e-01 insignificant 1 1.0000e+00 insignificant -0.05652974 0.2909427 lowCoverage 1 lowCoverage 0.86318 0.67164 0.1883260 7 0.84413 0.62619 0.2179421 3.9886e-09 1.0000e+00 weaklyHypermeth 1.5522e-07 1.000000 weaklyHypermeth 1.3367e-02 0.999835 weaklyHypermeth 2.1525e-01 1 insignificant 0.1587651 0.12818529 lowCoverage 1.000000 lowCoverage 0.86318 0.87085 -0.0175286 7 0.84413 0.87167 -0.02754203 8.9705e-01 2.2118e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.432018 0.8866354 insignificant 1 1 insignificant 0.0419891 0.386557 lowCoverage 1 lowCoverage 0.67164 0.87085 -0.2020201 7 0.62619 0.87167 -0.24548414 9.9999e-01 1.1747e-05 hypomethylated 1.0000000 3.9186e-04 hypomethylated 0.995705 9.8802e-02 insignificant 1 1.00000000 insignificant -0.1167760 0.2503489 lowCoverage 1.00000 lowCoverage chrX 154907840 154908840 59370 WASH6P ENSG00000182484 0.81401 632 6 0.71803 341 6 0.82905 276 6 0.930257 470 6 0.87339 216 6 0.83667 404 6 0.762946 426 6 0.84189 423 6 0.79602 317 6 0.90064 277 6 0.82803 527 6 0.839570 113 4 0.8855216 369 6 0.810225 189 6 0.892630 316 6 0.6678777 95 6 0.960000 279 2 0.847322 649 6 0.852082 699 6 0.84055 418 6 0.807354 167 6 0.831634 173 6 0.84304 340 6 0.78110 233 6 0.826394 418 6 0.889656 418 6 0.84761 316 6 0.88939 182 6 0.83720 496 6 0.857014 432 6 0.90155 408 6 0.884041 401 6 0.796047 383 6 0.73772 424 6 0.78424 378 6 0.79428 76 3 0.706279 314 6 0.71454 569 6 0.82087 841 6 0.819712 440 6 0.803770 588 6 0.86537 930 6 0.8959629 519 6 0.88108 0.793401 0.86642 0.931217 0.895598 0.883632 0.843004 0.87902 0.852561 0.92981 0.87642 0.817149 0.917241 0.864491 0.899095 0.8152438 0.894819 0.888867 0.877310 0.84726 0.856150 0.887711 0.883543 0.83197 0.882067 0.91729 0.885870 0.91524 0.88169 0.905136 0.93713 0.894776 0.8357261 0.76221 0.83284 0.76485 0.738267 0.75912 0.88967 0.881162 0.868692 0.91394 0.9237072 6 0.87973 0.89056 -0.01235944 6 0.85920 0.87374 -1.4545e-02 9.9314e-01 0.20211736 insignificant 1.00000000 1.00000 insignificant 0.998329 0.1462158 insignificant 1 1 insignificant -0.01333098 0.474222 insignificant 1 insignificant 0.87968 0.76912 0.10187916 6 0.83573 0.74387 0.09186139 3.1613e-14 9.8927e-01 weaklyHypermeth 2.9526e-12 1.000000 weaklyHypermeth 3.4961e-05 0.8335922 weaklyHypermeth 1.3606e-03 1 weaklyHypermeth 0.0808187 0.00295974 weaklyHypermeth 0.185350 insignificant 0.87968 0.91802 -0.0189245 6 0.83573 0.84152 -0.00579059 0.9005589 7.3345e-02 insignificant 1.00000 1.0000e+00 insignificant 0.983548 2.1437e-02 weaklyHypometh 1 1.0000e+00 insignificant -0.00480244 0.8370040 insignificant 1 insignificant 0.89053 0.76912 0.1116495 6 0.85270 0.74387 0.1088310 2.0512e-11 9.9887e-01 weaklyHypermeth 1.3684e-09 1.000000 weaklyHypermeth 2.6702e-05 0.969413 weaklyHypermeth 1.2470e-03 1 weaklyHypermeth 0.0941497 0.00099214 weaklyHypermeth 0.077221 weaklyHypermeth 0.89053 0.91802 -0.0055224 6 0.85270 0.84152 0.01117904 5.8657e-01 5.2169e-01 insignificant 1.0000000 1.0000e+00 insignificant 0.606936 0.4988926 insignificant 1 1 insignificant 0.0085285 0.683702 insignificant 1 insignificant 0.76912 0.91802 -0.1220476 6 0.74387 0.84152 -0.09765198 9.1954e-01 2.0395e-07 weaklyHypometh 1.0000000 1.6172e-05 weaklyHypometh 0.805697 2.0468e-04 weaklyHypometh 1 0.01449289 weaklyHypometh -0.0856211 0.0061255 weaklyHypometh 0.31784 insignificant chrY 13067713 13068713 59421 GYG2P ENSG00000206159 0.25455 46 3 0.69863 146 7 0.30235 59 3 0.539881 56 3 0.11090 38 3 0.73222 128 6 0.220952 42 3 0.27381 37 1 0.10659 59 3 0.23279 42 3 0.43625 62 3 0.734057 79 6 0.0488400 80 3 0.746032 49 3 0.646263 170 7 0.8023810 100 6 0.400000 10 2 0.617377 104 4 0.180912 61 3 0.14714 54 3 0.741514 74 6 0.381645 35 3 0.69822 68 6 0.35556 31 3 0.033333 14 1 0.064103 76 3 0.13948 56 3 0.00000 24 1 0.14670 57 3 0.236107 294 7 0.16582 79 3 0.346250 63 3 0.675112 146 7 0.62584 28 3 0.40909 12 1 0.00000 1 0 0.712406 83 6 0.30000 63 3 0.30808 45 3 0.783507 140 7 0.239130 27 1 0.15351 35 3 0.6042312 90 5 0.15689 0.655408 0.17479 0.633132 0.094908 0.529852 0.145594 0.38431 0.079103 0.31017 0.47285 0.598230 0.050663 0.371871 0.408267 0.5319920 0.342015 0.381110 0.211749 0.06139 0.612050 0.387793 0.656606 0.27308 0.083099 0.15150 0.090007 0.00000 0.25954 0.148377 0.13847 0.151972 0.4362952 0.43011 0.78692 0.10702 0.423099 0.26801 0.14597 0.696134 0.222903 0.19607 0.4933720 1 0.48875 0.28014 0.18256941 4 0.64867 0.31859 3.3009e-01 1.0641e-06 1.00000000 lowCoverage 0.00049693 1.00000 lowCoverage 0.021698 0.9999277 lowCoverage 1 1 lowCoverage 0.13586732 0.144906 lowCoverage 1 lowCoverage 0.48839 0.55856 -0.06658461 4 0.59849 0.61803 -0.01954786 5.0226e-01 2.7343e-01 lowCoverage 1.0000e+00 1.000000 lowCoverage 9.3442e-01 0.1203580 lowCoverage 1.0000e+00 1 lowCoverage -0.0421462 0.74631749 lowCoverage 1.000000 lowCoverage 0.48839 0.56973 -0.0762127 5 0.59849 0.67955 -0.08106431 0.8657707 1.5735e-01 insignificant 1.00000 1.0000e+00 insignificant 0.830226 2.7710e-01 insignificant 1 1.0000e+00 insignificant -0.00609614 0.9645966 lowCoverage 1 lowCoverage 0.28046 0.55856 -0.2605184 4 0.36410 0.61803 -0.2539344 9.9886e-01 9.3094e-05 lowCoverage 1.0000e+00 0.043475 lowCoverage 9.9174e-01 0.007848 lowCoverage 1.0000e+00 1 lowCoverage -0.1780135 0.21080294 lowCoverage 1.000000 lowCoverage 0.28046 0.56973 -0.2649983 4 0.36410 0.67955 -0.31545088 1.0000e+00 6.7523e-05 lowCoverage 1.0000000 1.5767e-02 lowCoverage 0.988355 0.0331387 lowCoverage 1 1 lowCoverage -0.1419635 0.337693 lowCoverage 1 lowCoverage 0.55856 0.56973 -0.0079794 4 0.61803 0.67955 -0.06151645 7.9000e-01 5.3831e-01 lowCoverage 1.0000000 1.0000e+00 lowCoverage 0.623174 9.0923e-01 lowCoverage 1 1.00000000 lowCoverage 0.0360501 0.8303983 lowCoverage 1.00000 lowCoverage